##maf version=1 scoring=blastz
a score=0.000000
s hg38.chr4_GL000008v2_random           0 20 +    209709 gaattc-aa------tggaatggaatt
s Gorilla_beringei.k141_1023189      1374 21 -      7875 ggaatgtag------tggagtggagtg
i Gorilla_beringei.k141_1023189  N 0 C 0
s Gorilla_gorilla.LT578344.1     57213590 21 + 151855818 ggaatgtag------tggagtggagtg
i Gorilla_gorilla.LT578344.1     N 0 C 0
s Pan_troglodytes.NBAG03003517.1    15396 21 +     18950 tgaatggag------tggaatggaatg
i Pan_troglodytes.NBAG03003517.1 N 0 I 20

a score=0.000000
s hg38.chr4_GL000008v2_random          20 15 +    209709 caat--gg-------------aa-----tgcaatg
s Gorilla_beringei.k141_1023189      1395 20 -      7875 gaga--gg-------------aacacagtggaatg
i Gorilla_beringei.k141_1023189  C 0 C 0
s Gorilla_gorilla.LT578344.1     57213611 20 + 151855818 gaga--gg-------------aacacagtggaatg
i Gorilla_gorilla.LT578344.1     C 0 C 0
s Pan_troglodytes.NBAG03000950.1   111450 30 -    135145 gaattaaatggagtggaatgcag-----tggagtg
i Pan_troglodytes.NBAG03000950.1 n 20 T 13309

a score=0.000000
s hg38.chr4_GL000008v2_random         35 5 +    209709 aaata
s Gorilla_beringei.k141_1023189     1415 5 -      7875 gaatg
i Gorilla_beringei.k141_1023189 C 0 C 0
s Gorilla_gorilla.LT578344.1    57213631 5 + 151855818 gaatg
i Gorilla_gorilla.LT578344.1    C 0 C 0
s Pan_troglodytes.CM009245.2    57656362 5 + 156046543 gaatg
i Pan_troglodytes.CM009245.2    n 13309 I 153

a score=0.000000
s hg38.chr4_GL000008v2_random          40 5 +    209709 caatg
s Pan_troglodytes.NBAG03003517.1    15437 5 +     18950 taatg
i Pan_troglodytes.NBAG03003517.1 I 20 I 88
e Gorilla_gorilla.LT578344.1     57213636 0 + 151855818 C
e Gorilla_beringei.k141_1023189      1420 0 -      7875 C

a score=0.000000
s hg38.chr4_GL000008v2_random          45 39 +    209709 gaatggaatgcaatgcaatgca-----atgcaatggaatgca-----aa
s Gorilla_beringei.k141_1023189      1420 39 -      7875 gaattgaatggaatgcaatgca-----atggaatgcaatgga-----at
i Gorilla_beringei.k141_1023189  C 0 C 0
s Gorilla_gorilla.LT578344.1     57213636 39 + 151855818 gaattgaatggaatgcaatgca-----atggaatgcaatgga-----at
i Gorilla_gorilla.LT578344.1     C 0 C 0
s Pan_paniscus.KQ412053.1           67323 14 -     73861 ------------------------------gaatggaatgga-----ac
i Pan_paniscus.KQ412053.1        N 0 C 0
s Pan_troglodytes.NBAG03000686.1   334392 44 -    341870 gagtggaatggaatggaatggagttcaatggaatggaatgga-----ac
i Pan_troglodytes.NBAG03000686.1 n 88 T 505

a score=0.000000
s hg38.chr4_GL000008v2_random          84 5 +    209709 ggaat
s Pan_paniscus.KQ412053.1           67337 5 -     73861 ggaat
i Pan_paniscus.KQ412053.1        C 0 I 1
s Pan_troglodytes.NBAG03000105.1   137466 5 -    189131 ggaat
i Pan_troglodytes.NBAG03000105.1 n 505 I 66
e Gorilla_gorilla.LT578344.1     57213675 0 + 151855818 C
e Gorilla_beringei.k141_1023189      1459 0 -      7875 C

a score=0.000000
s hg38.chr4_GL000008v2_random          89 18 +    209709 ggatg-----gtgaaattaaatg
s Gorilla_beringei.k141_1023189      1459 16 -      7875 gga-------atgcaatgcaatg
i Gorilla_beringei.k141_1023189  C 0 I 90
s Gorilla_gorilla.LT578344.1     57213675 16 + 151855818 gga-------atgcaatgcaatg
i Gorilla_gorilla.LT578344.1     C 0 I 86
s Pan_paniscus.KQ412053.1           67343 13 -     73861 ----------gtgAAATATAACg
i Pan_paniscus.KQ412053.1        I 1 C 0
s Pan_troglodytes.NBAG03000950.1    98171 16 -    135145 gga-------atggaatggaatg
i Pan_troglodytes.NBAG03000950.1 T 13309 I 13357

a score=0.000000
s hg38.chr4_GL000008v2_random         107 13 +    209709 tgagc----tgagatag
s Gorilla_beringei.k141_1023189      1565  8 -      7875 ---------tgcaatgg
i Gorilla_beringei.k141_1023189  I 90 C 0
s Gorilla_gorilla.LT578344.1     57213777  8 + 151855818 ---------tgcaatgg
i Gorilla_gorilla.LT578344.1     I 86 C 0
s Pan_paniscus.KQ412053.1           67356 13 -     73861 cgagc----taagattg
i Pan_paniscus.KQ412053.1        C 0 C 0
s Pan_troglodytes.NBAG03000950.1   111544 17 -    135145 ggaatggaaaggaatgg
i Pan_troglodytes.NBAG03000950.1 I 13357 T 40785

a score=0.000000
s hg38.chr4_GL000008v2_random         120 4 +    209709 tgcc
s Pan_paniscus.KQ412053.1           67369 4 -     73861 tgcc
i Pan_paniscus.KQ412053.1        C 0 C 0
s Pan_troglodytes.NBAG03000950.1    70776 4 -    135145 ggcc
i Pan_troglodytes.NBAG03000950.1 T 40785 I 8
e Gorilla_gorilla.LT578344.1     57213785 0 + 151855818 C
e Gorilla_beringei.k141_1023189      1573 0 -      7875 C

a score=0.000000
s hg38.chr4_GL000008v2_random        124 8 +    209709 actgcact
s Gorilla_beringei.k141_1023189     1573 8 -      7875 aatggaat
i Gorilla_beringei.k141_1023189 C 0 C 0
s Gorilla_gorilla.LT578344.1    57213785 8 + 151855818 aatggaat
i Gorilla_gorilla.LT578344.1    C 0 C 0
s Pan_paniscus.KQ412053.1          67373 8 -     73861 actgcact
i Pan_paniscus.KQ412053.1       C 0 C 0
s Pan_troglodytes.CM009245.2    57656520 8 + 156046543 aatggaat
i Pan_troglodytes.CM009245.2    I 153 I 65

a score=0.000000
s hg38.chr4_GL000008v2_random         132 9 +    209709 ccagcctgg
s Pan_paniscus.KQ412053.1           67381 9 -     73861 acagtcttg
i Pan_paniscus.KQ412053.1        C 0 C 0
s Pan_troglodytes.NBAG03000950.1    70788 9 -    135145 TTAGTCAta
i Pan_troglodytes.NBAG03000950.1 I 8 I 27444
e Gorilla_gorilla.LT578344.1     57213793 0 + 151855818 C
e Gorilla_beringei.k141_1023189      1581 0 -      7875 C

a score=0.000000
s hg38.chr4_GL000008v2_random         141 21 +    209709 g----------tta------cacagtgagatcttgta
s Gorilla_beringei.k141_1023189      1581 21 -      7875 g----------aaa------tagagtgaagtggactg
i Gorilla_beringei.k141_1023189  C 0 C 0
s Gorilla_gorilla.LT578344.1     57213793 21 + 151855818 g----------gaa------tagagtgaaGTGgactg
i Gorilla_gorilla.LT578344.1     C 0 C 0
s Pan_paniscus.KQ412053.1           67390 21 -     73861 g----------tga------cagagttACATCCAATT
i Pan_paniscus.KQ412053.1        C 0 C 0
s Pan_troglodytes.NBAG03003517.1    15530 37 +     18950 ttgagtgtagtggaatggaatggagtagtgtggaatg
i Pan_troglodytes.NBAG03003517.1 I 88 I 26

a score=0.000000
s hg38.chr4_GL000008v2_random         162 7 +    209709 gaaagtt
s Gorilla_beringei.k141_1023189      1602 5 -      7875 gagta--
i Gorilla_beringei.k141_1023189  C 0 C 0
s Gorilla_gorilla.LT578344.1     57213814 5 + 151855818 gagta--
i Gorilla_gorilla.LT578344.1     C 0 C 0
s Pan_paniscus.KQ412053.1           67411 7 -     73861 GAAataa
i Pan_paniscus.KQ412053.1        C 0 C 0
s Pan_troglodytes.NBAG03000105.1   137537 7 -    189131 gaaataa
i Pan_troglodytes.NBAG03000105.1 I 66 C 0

a score=0.000000
s hg38.chr4_GL000008v2_random         169 2 +    209709 ag
s Pan_paniscus.KQ412053.1           67418 2 -     73861 gg
i Pan_paniscus.KQ412053.1        C 0 C 0
s Pan_troglodytes.NBAG03000105.1   137544 2 -    189131 ag
i Pan_troglodytes.NBAG03000105.1 C 0 I 11
e Gorilla_gorilla.LT578344.1     57213819 0 + 151855818 C
e Gorilla_beringei.k141_1023189      1607 0 -      7875 C

a score=0.000000
s hg38.chr4_GL000008v2_random         171 11 +    209709 gaa----------------------tgg--aatgg
s Gorilla_beringei.k141_1023189      1607 11 -      7875 gag----------------------tgg--agtgg
i Gorilla_beringei.k141_1023189  C 0 C 0
s Gorilla_gorilla.LT578344.1     57213819 11 + 151855818 gag----------------------tgg--agtgg
i Gorilla_gorilla.LT578344.1     C 0 C 0
s Pan_paniscus.KQ412053.1           67420 11 -     73861 gaa----------------------tgg--aatgg
i Pan_paniscus.KQ412053.1        C 0 C 0
s Pan_troglodytes.NBAG03000950.1    98241 33 -    135145 gagattgtgccactaaactccagcctgtttgat--
i Pan_troglodytes.NBAG03000950.1 I 27444 I 59

a score=0.000000
s hg38.chr4_GL000008v2_random         182 5 +    209709 aatgg
s Gorilla_beringei.k141_1023189      1618 5 -      7875 aatgg
i Gorilla_beringei.k141_1023189  C 0 C 0
s Gorilla_gorilla.LT578344.1     57213830 5 + 151855818 aatgg
i Gorilla_gorilla.LT578344.1     C 0 C 0
s Pan_paniscus.KQ412053.1           67431 5 -     73861 agtag
i Pan_paniscus.KQ412053.1        C 0 C 0
s Pan_troglodytes.NBAG03000105.1   137557 5 -    189131 aatgg
i Pan_troglodytes.NBAG03000105.1 I 11 T 1017

a score=0.000000
s hg38.chr4_GL000008v2_random         187 23 +    209709 agta---------------aaatggaatggaatg-----gaat
s Gorilla_beringei.k141_1023189      1623 28 -      7875 aatg--g---a----a-tggaatcgaattgaatt-----gcat
i Gorilla_beringei.k141_1023189  C 0 C 0
s Gorilla_gorilla.LT578344.1     57213835 28 + 151855818 aatg--g---a----a-tggaatcgaattgaatt-----gCAT
i Gorilla_gorilla.LT578344.1     C 0 C 0
s Pan_paniscus.KQ412053.1           67436 28 -     73861 agtg--g---a----a-tggagtggattggactg-----gaat
i Pan_paniscus.KQ412053.1        C 0 C 0
s Pan_troglodytes.NBAG03003517.1    15593 38 +     18950 aatgtcgtggagttgaatggagtggagtggaatg-----gagt
i Pan_troglodytes.NBAG03003517.1 I 26 I 111

a score=0.000000
s hg38.chr4_GL000008v2_random        210 16 +    209709 cgaat----------ggactg--------------------caggg
s Gorilla_beringei.k141_1023189     1651 16 -      7875 cgtat----------cgaatc--------------------gaatt
i Gorilla_beringei.k141_1023189 C 0 C 0
s Gorilla_gorilla.LT578344.1    57213863 16 + 151855818 CGtat----------cgaatc--------------------gaatt
i Gorilla_gorilla.LT578344.1    C 0 C 0
s Pan_paniscus.KQ412053.1          67464 16 -     73861 ggaat----------ggaatg--------------------tagtg
i Pan_paniscus.KQ412053.1       C 0 C 0
s Pan_troglodytes.CM009245.2    57656593 36 + 156046543 cgaat----------cgaatcaaatcaaatggattggaatggaatg
i Pan_troglodytes.CM009245.2    I 65 C 0

a score=0.000000
s hg38.chr4_GL000008v2_random        226 34 +    209709 gagtggagtgg----------aatggattgtaatggagttgaat
s Gorilla_beringei.k141_1023189     1667 34 -      7875 gaatcaaatgg----------attggaatggaatggaatggaat
i Gorilla_beringei.k141_1023189 C 0 I 64
s Gorilla_gorilla.LT578344.1    57213879 34 + 151855818 gaatcaaatgg----------attggaatggaatggaatggaat
i Gorilla_gorilla.LT578344.1    C 0 I 64
s Pan_paniscus.KQ412053.1          67480 34 -     73861 gaatggaatgg----------aatggaaagaagtgGAATGGAGT
i Pan_paniscus.KQ412053.1       C 0 C 0
s Pan_troglodytes.CM009245.2    57656629 44 + 156046543 gaatcaaatggaatggaatcaaatggaatggaatggaatggaat
i Pan_troglodytes.CM009245.2    C 0 I 140

a score=0.000000
s hg38.chr4_GL000008v2_random         260 36 +    209709 ggaatggg-----atggaatggaatggaatggagttgact-----g
s Gorilla_beringei.k141_1023189      1765 36 -      7875 ggaatgga-----atggaatgcagtggaatggaatagaat-----g
i Gorilla_beringei.k141_1023189  I 64 I 12
s Gorilla_gorilla.LT578344.1     57213977 36 + 151855818 ggaatgga-----atggaatgcagtggaatggaatagaat-----g
i Gorilla_gorilla.LT578344.1     I 64 I 12
s Pan_paniscus.KQ412053.1           67514 36 -     73861 ataatgga-----gtggagtggaatggagtgtagtggaat-----g
i Pan_paniscus.KQ412053.1        C 0 C 0
s Pan_troglodytes.NBAG03000950.1    98333 41 -    135145 ggaatggaatagagtggagtggagtggagtggagtagagt-----g
i Pan_troglodytes.NBAG03000950.1 I 59 T 46631

a score=0.000000
s hg38.chr4_GL000008v2_random         296 7 +    209709 gagtgga
s Pan_paniscus.KQ412053.1           67550 7 -     73861 gagtgga
i Pan_paniscus.KQ412053.1        C 0 C 0
s Pan_troglodytes.NBAG03003517.1    15742 7 +     18950 aaatgga
i Pan_troglodytes.NBAG03003517.1 I 111 n 46631
e Gorilla_gorilla.LT578344.1     57214013 12 + 151855818 I
e Gorilla_beringei.k141_1023189      1801 12 -      7875 I

a score=0.000000
s hg38.chr4_GL000008v2_random         303 38 +    209709 gtggagaggagtg-gagtgaaatggaatggg------atggaatg
s Gorilla_beringei.k141_1023189      1813 38 -      7875 gtggacaggagtg-gagtggagtggtgtgga------gtgtagtg
i Gorilla_beringei.k141_1023189  I 12 I 12
s Gorilla_gorilla.LT578344.1     57214025 38 + 151855818 gtggacaggagtg-gagtggagtggtgtgga------gtgtagtg
i Gorilla_gorilla.LT578344.1     I 12 C 0
s Pan_paniscus.KQ412053.1           67557 38 -     73861 atgcaatggaaag-gaatggagtggaattga------atggaagg
i Pan_paniscus.KQ412053.1        C 0 C 0
s Pan_troglodytes.NBAG03000771.1   171273 38 +    210065 atggactggagtg-gagtggagtggagtgaa------gtggagtg
i Pan_troglodytes.NBAG03000771.1 n 46631 I 1315

a score=0.000000
s hg38.chr4_GL000008v2_random        341 50 +    209709 taatg-gagtggagt-ggagtggagtggagtg---gatttga------tt---ggagtggagtg
s Gorilla_beringei.k141_1023189     1863 28 -      7875 ------------------------atggactg---aaatgga------at---ggaatggactc
i Gorilla_beringei.k141_1023189 I 12 C 0
s Gorilla_gorilla.LT578344.1    57214063 50 + 151855818 gaatg-gaatggaat-ggaatggaatggactg---aaatgga------at---ggaatggactc
i Gorilla_gorilla.LT578344.1    C 0 C 0
s Pan_paniscus.KQ412053.1          67595 45 -     73861 caatt-gagtggaat-ggagtggagtggagtg---gagggca------gt---ggaatg-----
i Pan_paniscus.KQ412053.1       C 0 I 283
s Pan_troglodytes.CM009245.2    57656813 56 + 156046543 gaatg-gaatggaat-ggaatcgaatggaatcatcgaatgga------atcatggaatggaatc
i Pan_troglodytes.CM009245.2    I 140 C 0

a score=0.000000
s hg38.chr4_GL000008v2_random        391 41 +    209709 gaatgga----------gt----------g-------gaacggaat---ggaatggaat--------ggaac----g------------gaatgg
s Gorilla_beringei.k141_1023189     1891 58 -      7875 gaatgga----------at----------catcatc-gaatggact---cgaatggaatcatcgaatggaatcat-g------------gaatgg
i Gorilla_beringei.k141_1023189 C 0 I 222
s Gorilla_gorilla.LT578344.1    57214113 58 + 151855818 gaatgga----------at----------catcatc-gaatggact---cgaatggaatcatcgaatggaatcat-g------------gaatgg
i Gorilla_gorilla.LT578344.1    C 0 I 222
s Pan_troglodytes.CM009245.2    57656869 81 + 156046543 aaacgga----------attatcatcgaatgtaatc-aaatggaatcatgtaatggaatc---gaacagaatcattgaatgaaatcatataatgg
i Pan_troglodytes.CM009245.2    C 0 n 0
e Pan_paniscus.KQ412053.1          67640 283 -     73861 I

a score=0.000000
s hg38.chr4_GL000008v2_random        432 3 +    209709 tga
s Pan_troglodytes.KZ622857.1      321655 3 +    772158 tgg
i Pan_troglodytes.KZ622857.1    n 0 I 413
e Pan_paniscus.KQ412053.1          67640 283 -     73861 I
e Gorilla_gorilla.LT578344.1    57214171 222 + 151855818 I
e Gorilla_beringei.k141_1023189     1949 222 -      7875 I

a score=0.000000
s hg38.chr4_GL000008v2_random         435 40 +    209709 aatgaaatgtgagctgagattgtgccactgtattccag-cc
s Gorilla_beringei.k141_1023189      2171 31 -      7875 ----------gagctgagattgtgCCACTGCGCTCCAGGCT
i Gorilla_beringei.k141_1023189  I 222 I 2572
s Gorilla_gorilla.LT578344.1     57214393 31 + 151855818 ----------gagctgagattgtgccattgcgctccaggct
i Gorilla_gorilla.LT578344.1     I 222 I 2548
s Pan_paniscus.CM003390.1        99764114 41 - 162613886 CATgaaatgtgagctgagattgtgccactgcactccagcct
i Pan_paniscus.CM003390.1        n 283 n 283
s Pan_troglodytes.NBAG03003562.1     2784 40 +     18198 catgtaatgtgaactgagattgtgccactgcactccag-cc
i Pan_troglodytes.NBAG03003562.1 n 413 I 1983

a score=0.000000
s hg38.chr4_GL000008v2_random         475 59 +    209709 ttttttgacacag-----tgagatcctgtcaaaggaaagaaatggaatggaatgggttggaatg
s Gorilla_beringei.k141_2370269       844 52 +      6094 tggaatgaagtga-----aatgg-------aatggagtggagtggaaagaagtggagtggaatg
i Gorilla_beringei.k141_2370269  n 2572 I 10
s Pan_paniscus.KQ412053.1           67923 47 -     73861 -----tggaacgg-----aaggG-------AACAGAGTGTAGTGGAGTAGTGTGGAGTTGAGTG
i Pan_paniscus.KQ412053.1        I 283 C 0
s Pan_troglodytes.NBAG03000163.1    83479 57 -    223623 tggattggagtgatgtggaatgg-------agtggaatggagcggAGAGGAGTGGactagagtg
i Pan_troglodytes.NBAG03000163.1 n 1983 I 387
e Gorilla_gorilla.LT578344.1     57214424 2548 + 151855818 I

a score=0.000000
s hg38.chr4_GL000008v2_random         534  5 +    209709 gaa-------------------------tg
s Gorilla_beringei.k141_3239499       377  5 -     15222 gag-------------------------tg
i Gorilla_beringei.k141_3239499  n 10 I 218
s Pan_paniscus.KQ412053.1           67970 30 -     73861 GAGNNNNNNNNNNNNNNNNNNNNtgaaatg
i Pan_paniscus.KQ412053.1        C 0 I 2
s Pan_troglodytes.NBAG03000105.1   136545  5 -    189131 GAG-------------------------TG
i Pan_troglodytes.NBAG03000105.1 T 1017 I 548
e Gorilla_gorilla.LT578344.1     57214424 2548 + 151855818 I

a score=0.000000
s hg38.chr4_GL000008v2_random        539 25 +    209709 gagtggaatggaatggaatggaatg
s Gorilla_beringei.k141_2370269      906 25 +      6094 gagtggaatagaatgcaatggaata
i Gorilla_beringei.k141_2370269 I 10 C 0
s Pan_paniscus.KQ412053.1          68002 23 -     73861 --atggaatggaacagaatggaatg
i Pan_paniscus.KQ412053.1       I 2 C 0
s Pan_troglodytes.KZ622857.1      322071 25 +    772158 gaatggaatggaatggaatggaatg
i Pan_troglodytes.KZ622857.1    I 413 I 118
e Gorilla_gorilla.LT578344.1    57214424 2548 + 151855818 I

a score=0.000000
s hg38.chr4_GL000008v2_random         564 21 +    209709 gaatggagtga-aatggaaagg
s Gorilla_beringei.k141_2370269       931 21 +      6094 gagtggagtgg-aatggaatag
i Gorilla_beringei.k141_2370269  C 0 I 528
s Pan_paniscus.KQ412053.1           68025 22 -     73861 gaattgaatgggaATGGAATGG
i Pan_paniscus.KQ412053.1        C 0 C 0
s Pan_troglodytes.NBAG03004682.1      755 21 +      3314 gaatggaatgg-aatggaatgg
i Pan_troglodytes.NBAG03004682.1 n 118 I 389
e Gorilla_gorilla.LT578344.1     57214424 2548 + 151855818 I

a score=0.000000
s hg38.chr4_GL000008v2_random         585 13 +    209709 tgaaatgaaatgt
s Gorilla_beringei.k141_3239499       600 12 -     15222 tggagtggaatg-
i Gorilla_beringei.k141_3239499  I 218 I 150
s Gorilla_gorilla.LT578344.1     57216972  1 + 151855818 -----------g-
i Gorilla_gorilla.LT578344.1     I 2548 C 0
s Pan_paniscus.KQ412053.1           68047 13 -     73861 TGAAATGTAATGT
i Pan_paniscus.KQ412053.1        C 0 C 0
s Pan_troglodytes.NBAG03000950.1    51743 13 -    135145 tgaaatgaaatgt
i Pan_troglodytes.NBAG03000950.1 T 46631 I 46844

a score=0.000000
s hg38.chr4_GL000008v2_random         598 57 +    209709 gagctaaaattgtgccactgcactccagtctcggtga-cagagtgagatcctgtcgaa
s Gorilla_beringei.k141_1023189      4774 57 -      7875 gagctgagattgtgccactgcactccaggctgggtga-cagagagagatactcttgaa
i Gorilla_beringei.k141_1023189  I 2572 C 0
s Gorilla_gorilla.LT578344.1     57216973 57 + 151855818 gagctgagattgtgccactgcactccagggtgggtga-cagagagagatactcttgaa
i Gorilla_gorilla.LT578344.1     C 0 C 0
s Pan_paniscus.KQ412053.1           68060 51 -     73861 TAGCTAA---CGTGTTACTGTGCTCCAttctgggtgt-cagagtgagatcCAATC---
i Pan_paniscus.KQ412053.1        C 0 C 0
s Pan_troglodytes.NBAG03000950.1    98600 57 -    135145 gggctgagattgtgccactgcactcctgcctgtgtga-cagagtgagatactgtcgaa
i Pan_troglodytes.NBAG03000950.1 I 46844 C 0

a score=0.000000
s hg38.chr4_GL000008v2_random         655 1 +    209709 a
s Gorilla_beringei.k141_1023189      4831 1 -      7875 a
i Gorilla_beringei.k141_1023189  C 0 I 144
s Gorilla_gorilla.LT578344.1     57217030 1 + 151855818 a
i Gorilla_gorilla.LT578344.1     C 0 I 144
s Pan_troglodytes.NBAG03000950.1    98657 1 -    135145 a
i Pan_troglodytes.NBAG03000950.1 C 0 I 453
e Pan_paniscus.KQ412053.1           68111 0 -     73861 C

a score=0.000000
s hg38.chr4_GL000008v2_random        656 14 +    209709 gaaaatatcggaat
s Gorilla_beringei.k141_3239499      762 14 -     15222 cagtggaatggaat
i Gorilla_beringei.k141_3239499 I 150 I 1715
s Pan_troglodytes.KZ622853.1      256871 14 +    258671 gagtggagtggaat
i Pan_troglodytes.KZ622853.1    n 453 I 51
e Pan_paniscus.KQ412053.1          68111  0 -     73861 C
e Gorilla_gorilla.LT578344.1    57217031 144 + 151855818 I

a score=0.000000
s hg38.chr4_GL000008v2_random         670 47 +    209709 ggaatggtgtggactgg-----aat-----ggcatgtagtggaatggagtggaaagg
s Gorilla_beringei.k141_1023189      4976 46 -      7875 ggagtgcagtggaaagg-----agt-----ggaatggaatgggctggattggaaag-
i Gorilla_beringei.k141_1023189  I 144 I 165
s Gorilla_gorilla.LT578344.1     57217175 46 + 151855818 ggagtgcagtggaaagg-----agt-----ggaatggaatgggctggattggaaag-
i Gorilla_gorilla.LT578344.1     I 144 I 135
s Pan_troglodytes.NBAG03000686.1   333931 47 -    341870 ggaatggagtggagtgt-----aat-----gtaAAGGATTGGAGTGGAACAAAATGG
i Pan_troglodytes.NBAG03000686.1 T 505 I 1636
e Pan_paniscus.KQ412053.1           68111  0 -     73861 C

a score=0.000000
s hg38.chr4_GL000008v2_random         717 32 +    209709 agtggaatggaataggatggaatgaaatggag
s Gorilla_beringei.k141_2370269      1480 32 +      6094 aattgagtggagcggaatggaatggaatggag
i Gorilla_beringei.k141_2370269  I 528 C 0
s Pan_troglodytes.NBAG03000105.1   137098 32 -    189131 agaagaattgagtggaatggaatggagtggag
i Pan_troglodytes.NBAG03000105.1 I 548 I 11
e Pan_paniscus.KQ412053.1           68111  0 -     73861 C
e Gorilla_gorilla.LT578344.1     57217221 135 + 151855818 I

a score=0.000000
s hg38.chr4_GL000008v2_random        749 11 +    209709 tggagtgga---gt
s Gorilla_beringei.k141_2370269     1512 11 +      6094 ttgagtgga---gt
i Gorilla_beringei.k141_2370269 C 0 C 0
s Pan_troglodytes.KZ622857.1      322214 11 +    772158 tggagtgga---at
i Pan_troglodytes.KZ622857.1    I 118 I 50
e Pan_paniscus.KQ412053.1          68111  0 -     73861 C
e Gorilla_gorilla.LT578344.1    57217221 135 + 151855818 I

a score=0.000000
s hg38.chr4_GL000008v2_random         760 11 +    209709 agtgtggaatg
s Gorilla_beringei.k141_2370269      1523 11 +      6094 ggagtggaatg
i Gorilla_beringei.k141_2370269  C 0 I 857
s Pan_troglodytes.NBAG03000105.1   137141 11 -    189131 ggaatggaatg
i Pan_troglodytes.NBAG03000105.1 I 11 I 1249
e Pan_paniscus.KQ412053.1           68111  0 -     73861 C
e Gorilla_gorilla.LT578344.1     57217221 135 + 151855818 I

a score=0.000000
s hg38.chr4_GL000008v2_random        771 39 +    209709 gaatgg----agtggagttga-gt----ggaaa-ggagtggaggggagt
s Gorilla_beringei.k141_3239499     2491 37 -     15222 --atgg----agtggagtgca-gt----ggaat-ggagtggaatggaat
i Gorilla_beringei.k141_3239499 I 1715 I 380
s Pan_troglodytes.KZ622853.1      256936 34 +    258671 gaattg----aatgga------gt----ggaat-ggaatggagtggagt
i Pan_troglodytes.KZ622853.1    I 51 I 238
e Pan_paniscus.KQ412053.1          68111  0 -     73861 C
e Gorilla_gorilla.LT578344.1    57217221 135 + 151855818 I

a score=0.000000
s hg38.chr4_GL000008v2_random       810 31 +    209709 g-----ga-gtggaat--------------agaat-ggaatgcaatg----gaatg
s Gorilla_beringei.k141_748801       20 31 +      3374 g-----ga-atggaat--------------ggaat-ggaatggtatg----gaatg
i Gorilla_beringei.k141_748801 n 380 I 1081
s Gorilla_gorilla.LT578344.1   57217356 25 + 151855818 ------------gaac--------------agaat-gcaatgcaatg----gaaag
i Gorilla_gorilla.LT578344.1   I 135 C 0
s Pan_troglodytes.KZ622857.1     322275 29 +    772158 g-----ca-atgcaat--------------ggaat-ggaatgaaatg----gaa--
i Pan_troglodytes.KZ622857.1   I 50 I 1678
e Pan_paniscus.KQ412053.1         68111  0 -     73861 C

a score=0.000000
s hg38.chr4_GL000008v2_random         841 51 +    209709 gtgaaaagaaatgcgtg--------------------ctgaaattgtgccactgcattacagca--tg--tgaca
s Gorilla_beringei.k141_1023189      5187 53 -      7875 t----------------tgacatgaa-atgtga-g--ctgagattgtgccactgcactccagcc--tgggtgaca
i Gorilla_beringei.k141_1023189  I 165 C 0
s Gorilla_gorilla.LT578344.1     57217381 53 + 151855818 t----------------TGACatgaa-atgtga-g--ctgagattgtgccactgcactccagcc--tgggtgaca
i Gorilla_gorilla.LT578344.1     C 0 C 0
s Pan_troglodytes.NBAG03000163.1    83923 53 -    223623 g----------------tgaaatgaa-atgtga-g--atgagattgttccactgcactccaacc--tgggtgaca
i Pan_troglodytes.NBAG03000163.1 I 387 C 0
e Pan_paniscus.KQ412053.1           68111  0 -     73861 C

a score=0.000000
s hg38.chr4_GL000008v2_random         892 86 +    209709 gaggg---------------agatcctgtcgaagaa--aaggagtggaatggaag----ggattagaatg--gaatggaatgga---------------atgg-----------attgaagttgagt-----ggagtgga
s Gorilla_beringei.k141_1023189      5240 86 -      7875 cagtg---------------atatcctgttgaa--agaaaggaatggaatgcaat----ggagtgaaatt--gaatggaatgga---------------gtgg-----------agtggagtggagt-----ggagtaga
i Gorilla_beringei.k141_1023189  C 0 I 387
s Gorilla_gorilla.LT578344.1     57217434 86 + 151855818 cagtg---------------atatcctgttgaa--agaaaggaatggaatgcaat----ggagtgaaatt--gaatggaatgga---------------gtgg-----------agtggagtggagt-----gtagtaga
i Gorilla_gorilla.LT578344.1     C 0 I 69
s Pan_paniscus.KQ412053.1           68111 26 -     73861 ---------------------------------------------------------------------------------GAA---------------ATa-------------aaggaatgtaat-----ggaatgga
i Pan_paniscus.KQ412053.1        C 0 C 0
s Pan_troglodytes.NBAG03000163.1    83976 85 -    223623 gagtg---------------agatcctgtcgaa--ggaaaagaattgaatggaat----ggagttgaatg--gaa-ggaattga---------------gtgt-----------aatggagtggagt-----ggagtaga
i Pan_troglodytes.NBAG03000163.1 C 0 I 343

a score=0.000000
s hg38.chr4_GL000008v2_random         978 49 +    209709 attgagtggagtggagtgcagtggaatggaatgaaatggagtgg---aattg
s Gorilla_beringei.k141_3239499      2908 49 -     15222 gtggagtggaatggagtggagtggagtggaatgtagtggaatgg---aatgg
i Gorilla_beringei.k141_3239499  I 380 I 2236
s Pan_paniscus.KQ412053.1           68137 46 -     73861 gtagaaaggaatggaatggagtggatgggaatggaatggagtgg---ag---
i Pan_paniscus.KQ412053.1        C 0 C 0
s Pan_troglodytes.NBAG03000950.1    99111 49 -    135145 ttggagtggaatggaatggaatggaaggaaatggaattgaatgc---aatgg
i Pan_troglodytes.NBAG03000950.1 I 453 C 0
e Gorilla_gorilla.LT578344.1     57217520 69 + 151855818 I

a score=0.000000
s hg38.chr4_GL000008v2_random        1027 1 +    209709 t
s Gorilla_beringei.k141_317772        486 1 +      1616 t
i Gorilla_beringei.k141_317772   n 2236 C 0
s Pan_troglodytes.NBAG03000950.1    99160 1 -    135145 t
i Pan_troglodytes.NBAG03000950.1 C 0 C 0
e Pan_paniscus.KQ412053.1           68183 0 -     73861 C
e Gorilla_gorilla.LT578344.1     57217520 69 + 151855818 I

a score=0.000000
s hg38.chr4_GL000008v2_random        1028 24 +    209709 gaaataaaatg---tgagctgttattg
s Gorilla_beringei.k141_317772        487 24 +      1616 gaaatgaaatg---tgagctgagattc
i Gorilla_beringei.k141_317772   C 0 I 833
s Gorilla_gorilla.LT578344.1     57217589 12 + 151855818 ---------------gagctgagattg
i Gorilla_gorilla.LT578344.1     I 69 C 0
s Pan_troglodytes.NBAG03000950.1    99161 24 -    135145 gaaatgtaatg---tgagctgagatta
i Pan_troglodytes.NBAG03000950.1 C 0 T 46669
e Pan_paniscus.KQ412053.1           68183  0 -     73861 C

a score=0.000000
s hg38.chr4_GL000008v2_random        1052 34 +    209709 tgcc-actgcacaccagcctaggtga-cacagtgag
s Gorilla_beringei.k141_2465350      5368 34 +     10038 tg-ccactgcactccagactgggtga-cagagtgag
i Gorilla_beringei.k141_2465350  n 833 I 125
s Gorilla_gorilla.LT578344.1     57217601 33 + 151855818 tg-ccactgcactgcaggctgggtga-caga-tgag
i Gorilla_gorilla.LT578344.1     C 0 C 0
s Pan_troglodytes.NBAG03000950.1    52516 28 -    135145 -------tgcactccagtctgggtgt-caCAGTGAG
i Pan_troglodytes.NBAG03000950.1 T 46669 C 0
e Pan_paniscus.KQ412053.1           68183  0 -     73861 C

a score=0.000000
s hg38.chr4_GL000008v2_random        1086 34 +    209709 atcctgtcaaaagaaaagaatggaatggaatgga
s Gorilla_beringei.k141_2388266      2771 34 +     17447 atactctcaaaagtaaggaatggaatggaatgca
i Gorilla_beringei.k141_2388266  n 125 C 0
s Gorilla_gorilla.LT578344.1     57217634 34 + 151855818 atattctcaaaagaaaggaatgcaatggaacgct
i Gorilla_gorilla.LT578344.1     C 0 C 0
s Pan_troglodytes.NBAG03000950.1    52544 34 -    135145 ATCCAGtctaaataaaggaatggaatggcatgga
i Pan_troglodytes.NBAG03000950.1 C 0 C 0
e Pan_paniscus.KQ412053.1           68183  0 -     73861 C

a score=0.000000
s hg38.chr4_GL000008v2_random        1120 31 +    209709 gtggaatggagtggaatttaatggaatggat
s Gorilla_beringei.k141_2388266      2805  9 +     17447 gtggaatgg----------------------
i Gorilla_beringei.k141_2388266  C 0 I 2
s Gorilla_gorilla.LT578344.1     57217668  9 + 151855818 ttggaatgg----------------------
i Gorilla_gorilla.LT578344.1     C 0 I 2
s Pan_troglodytes.NBAG03000950.1    52578  9 -    135145 gtagaattg----------------------
i Pan_troglodytes.NBAG03000950.1 C 0 I 942
e Pan_paniscus.KQ412053.1           68183  0 -     73861 C

a score=0.000000
s hg38.chr4_GL000008v2_random        1151 143 +    209709 tgga-----g-tggagtggagtggaaagagtggaatggaatgggatg----------gaatggaaaggagtggagtgcagtggaatgga-----gaggagtggagtggcatggattggagtggagtggagtggagtagagtagaatgga------atggaatggaatgga
s Gorilla_beringei.k141_2388266      2816 144 +     17447 tgga-----a-cggagaggagtggagt----ggggtggagtggagag----------gagtggagtggagtgcagtggagttgagtgga-----atggaatggaatggact-caaaaaaatggaatggagtggaatggactcgaatggaatcatcattgaatggactcga
i Gorilla_beringei.k141_2388266  I 2 C 0
s Gorilla_gorilla.LT578344.1     57217679 134 + 151855818 tgga-----a-tggagaggac-----t----ggagtggagtggagtc----------gaTTGGTGAggagtggagtgtagtggaatgGA-----CTCGGATGTAATGGAATgtagcggaatggaatggaatggaatggactcgaatgga------atggaatggactcga
i Gorilla_gorilla.LT578344.1     I 2 C 0
s Pan_paniscus.KQ412053.1           68183 134 -     73861 tgga-----a-tgcagtggattggaat----ggaatggaggggaggg----------gaagggagtggagtggagtgcagtggaatgga-----gtggaaaggagtgaaatgg-----agtgtaatggaatggagcagagtgtaatgga------atggagtggaatgga
i Pan_paniscus.KQ412053.1        C 0 C 0
s Pan_troglodytes.NBAG03000686.1   335614 139 -    341870 tgga-----g-tggagtggagtggagt----gcagtggagtggattg----------gaatggaatggagggtagtggagtggagtggaaagcggtggaaaggagtgaaatgg-----aatggaatggaatggagtggagtggaaagga------atggaatggaatgga
i Pan_troglodytes.NBAG03000686.1 I 1636 I 264

a score=0.000000
s hg38.chr4_GL000008v2_random        1294 20 +    209709 gtggagtgga-atggaatgga
s Gorilla_beringei.k141_2388266      2960 21 +     17447 atggaatcgtcatcaaatgga
i Gorilla_beringei.k141_2388266  C 0 C 0
s Gorilla_gorilla.LT578344.1     57217813 21 + 151855818 atggaatcctcatcgaatgga
i Gorilla_gorilla.LT578344.1     C 0 C 0
s Pan_paniscus.KQ412053.1           68317 20 -     73861 actgAAACGt-gtagaatgaa
i Pan_paniscus.KQ412053.1        C 0 C 0
s Pan_troglodytes.NBAG03000950.1    53529 20 -    135145 atggaatgga-atggaatgga
i Pan_troglodytes.NBAG03000950.1 I 942 C 0

a score=0.000000
s hg38.chr4_GL000008v2_random        1314 19 +    209709 atggaatggaat-gga-------atgg
s Gorilla_beringei.k141_2388266      2981 27 +     17447 ctcgaatggaatcatcgaatggaatcg
i Gorilla_beringei.k141_2388266  C 0 I 80
s Gorilla_gorilla.LT578344.1     57217834 20 + 151855818 ctcaaatggaatcgtc-------tttg
i Gorilla_gorilla.LT578344.1     C 0 I 61
s Pan_paniscus.KQ412053.1           68337 17 -     73861 atggaatggaat-gga-------at--
i Pan_paniscus.KQ412053.1        C 0 C 0
s Pan_troglodytes.NBAG03000950.1    53549 19 -    135145 atggaatggaat-gga-------atgg
i Pan_troglodytes.NBAG03000950.1 C 0 I 100

a score=0.000000
s hg38.chr4_GL000008v2_random        1333 72 +    209709 agaaatgcaatgggagctgagattgtgccactgtactccaggatgtgtc-----------agagagagagatagtctcgaaag
s Pan_troglodytes.NBAG03000950.1    53668 72 -    135145 tgaaacgaaatgtgagctgagattgttgcACTGCACTCT------AACA--T--G-Gctgaaagaatgagatcctgttgaaag
i Pan_troglodytes.NBAG03000950.1 I 100 I 18469
e Pan_paniscus.KQ412053.1           68354  0 -     73861 C
e Gorilla_gorilla.LT578344.1     57217854 61 + 151855818 I
e Gorilla_beringei.k141_2388266      3008 80 +     17447 I

a score=0.000000
s hg38.chr4_GL000008v2_random        1405 29 +    209709 aaaggaatggaatggaatgcagtggaatg
s Gorilla_beringei.k141_2388266      3088 24 +     17447 -----catggaatggaatccaatggaatc
i Gorilla_beringei.k141_2388266  I 80 I 6
s Pan_paniscus.KQ412053.1           68354 26 -     73861 ---gtattgGAGAGGAGTgcactggagtg
i Pan_paniscus.KQ412053.1        C 0 C 0
s Pan_troglodytes.NBAG03000950.1    72209 29 -    135145 Aaggcaattgaatggaatggagtagaatg
i Pan_troglodytes.NBAG03000950.1 I 18469 I 40082
e Gorilla_gorilla.LT578344.1     57217854 61 + 151855818 I

a score=0.000000
s hg38.chr4_GL000008v2_random        1434 62 +    209709 gaatggaatggaatggaatggaatggggtt-gactggagtggagt------ggagtgg-agtgaagtgga
s Gorilla_beringei.k141_2388266      3118 66 +     17447 gaatggaatcgaatggaat--catggaatg-gaatcgaatggaatcatcatggaatgg-aatcgagtgga
i Gorilla_beringei.k141_2388266  I 6 I 79
s Gorilla_gorilla.LT578344.1     57217915  2 + 151855818 --------------------------------------------------------------------ga
i Gorilla_gorilla.LT578344.1     I 61 C 0
s Pan_paniscus.KQ412053.1           68380 52 -     73861 gagtggagtg----------cagttgaatg-gaatggaatgaaac------ggaaTTG-GATTgagtgga
i Pan_paniscus.KQ412053.1        C 0 C 0
s Pan_troglodytes.NBAG03000105.1   138401 62 -    189131 gagtggagtggattggagtgcagttcaatg-gaatggaatggaac------ggaattg-aaaggagtgga
i Pan_troglodytes.NBAG03000105.1 I 1249 I 182

a score=0.000000
s hg38.chr4_GL000008v2_random       1496 69 +    209709 g---tg------gagtggagtggaatggcgagg------agt-agaatg----ggat--------------------ggaat-----g-------gaattg--aatgatgtggagt----------ggagtcg
s Gorilla_beringei.k141_1023189     5713 82 -      7875 a---tcatcatcgactggaatcgaatggaatcatcatcaaat-ggactc----gaat--------------------ggaat-----c-atcatcgaatgg--a-----ctccaat----------ggaatca
i Gorilla_beringei.k141_1023189 I 387 I 207
s Gorilla_gorilla.LT578344.1    57217917 82 + 151855818 a---tcaTCATCgactggaatcgaatggaatcatcatcaaat-ggactc----gaat--------------------ggaat-----c-atcatcgaatgg--a-----ctccaAT----------GGAATCA
i Gorilla_gorilla.LT578344.1    C 0 I 6
s Pan_paniscus.KQ412053.1          68432 81 -     73861 g---tg------aaatggaatggaatggaatgg------aat-ggaatg----gaatcgaatcgaatcatatcgaatggaat-----g-------gattgg--a-----gaggaga----------ggag---
i Pan_paniscus.KQ412053.1       C 0 C 0
s Pan_troglodytes.KZ622853.1      257208 61 +    258671 g---tg------gaatggagtggaatggaatgg------agt-ggaatg----gagt--------------------ggact-----g-------gaatgg--a-----atggagt----------ggaa---
i Pan_troglodytes.KZ622853.1    I 238 I 118

a score=0.000000
s hg38.chr4_GL000008v2_random        1565 71 +    209709 ggtggagtggagttcat--------tgga-----atg----gagt-ggaatggagcggaat----g----gaatg---ggatggagtggaat--------------------ggagag------ga
s Gorilla_beringei.k141_2388266      3263 76 +     17447 aatggaa------------------tcaa-----atg----gaatcatcatcgaatgga---atcgaatggaatcatcgaatggaatcacat--------------------tgaatcatcatcga
i Gorilla_beringei.k141_2388266  I 79 C 0
s Gorilla_gorilla.LT578344.1     57218005 32 + 151855818 AATGGAA------------------TCAA-----agg----gaatc-------------atcatcgaatgga------------------------------------------------------
i Gorilla_gorilla.LT578344.1     I 6 I 6
s Pan_troglodytes.NBAG03000163.1    84404 71 -    223623 AATGAAG------------------TGGAtaggaggg----gaat-ggagtggagtggagt-a--gaatgtaatg---gagtggaatgggtt--------------------ggaatg------ga
i Pan_troglodytes.NBAG03000163.1 I 343 C 0
e Pan_paniscus.KQ412053.1           68513  0 -     73861 C

a score=0.000000
s hg38.chr4_GL000008v2_random        1636 58 +    209709 gtggagtgcagt----ggagag------gagaggagtggaattgagtg-------gaatggaat----------c-----------g---gatata-------------atg
s Gorilla_beringei.k141_2388266      3339 93 +     17447 atggaatcaaac----ggagtcatca---aatgaaatcgaatggcatcatcatt-gaatggaat----------cgaacagaa-tcatcaaatgaaatcgaatggcatcatc
i Gorilla_beringei.k141_2388266  C 0 I 3
s Gorilla_gorilla.LT578344.1     57218043 36 + 151855818 ----------------------------gaatggaattgaatggaatcatcacc-gaatggaat----------c-------------------------------------
i Gorilla_gorilla.LT578344.1     I 6 I 13
s Pan_paniscus.KQ412053.1           68513 27 -     73861 -----------------------------------------tggagtg-------gaatagaGA----------G-----------A---ACTGGA-------------AAg
i Pan_paniscus.KQ412053.1        C 0 C 0
s Pan_troglodytes.NBAG03000163.1    84475 68 -    223623 atggaaaggaat----ggaatg------gaaaggagtggaatggaatg-------gattccaat----------tgaa-tgaaatga---aatgga-------------atg
i Pan_troglodytes.NBAG03000163.1 C 0 C 0

a score=0.000000
s hg38.chr4_GL000008v2_random        1694 61 +    209709 gaatg----------tagtggagtagagtggagtggagtggtgtggaaagaa---gtggaa------tgaaatggaattg
s Gorilla_beringei.k141_2388266      3435 65 +     17447 gaatg----------gaatcgaacagaatc--atctaatggaatcgaatgtaatcat--catcgaa-tggaatcgaatgg
i Gorilla_beringei.k141_2388266  I 3 n 3
s Gorilla_gorilla.LT578344.1     57218092 62 + 151855818 gaatg----------gaatcaaatggaatg--atcgaatggaattgaatgga---at--catcgaa-tggaatcaaatgg
i Gorilla_gorilla.LT578344.1     I 13 C 0
s Pan_paniscus.KQ412053.1           68540 61 -     73861 agatg----------gaatggaaaggagtggagtgaagtggagtggagtgga---atggaa------tagaatggaagga
i Pan_paniscus.KQ412053.1        C 0 I 1
s Pan_troglodytes.NBAG03000163.1    84543 66 -    223623 gaatg----------gaatggaatggattccaattgaatgaaatggaatgga---atggaatggac-tggaatgaaaagg
i Pan_troglodytes.NBAG03000163.1 C 0 T 13491

a score=0.000000
s hg38.chr4_GL000008v2_random        1755 38 +    209709 aa-------------------ttg--aatggaatggaattg---aatgcaatgcaatg-----gaaa
s Gorilla_beringei.k141_1023189      6002 39 -      7875 aa-------------------t----catcgaatggaatcatctaatggaatggaatg-----gaat
i Gorilla_beringei.k141_1023189  I 207 C 0
s Gorilla_gorilla.LT578344.1     57218154 39 + 151855818 aa-------------------t----catcgaatggaatcatctaatggaatcgaatg-----gaat
i Gorilla_gorilla.LT578344.1     C 0 C 0
s Pan_paniscus.KQ412053.1           68602 34 -     73861 ----------------------gg--aagggaatggaA-GG---AATGGAATNNNNNN-----NNNN
i Pan_paniscus.KQ412053.1        I 1 C 0
s Pan_troglodytes.NBAG03000686.1   336017 57 -    341870 aaataatggaatggaatggaatgg--aatggaatggaatgg---aatggaatggaatg-----gaat
i Pan_troglodytes.NBAG03000686.1 I 264 I 378

a score=0.000000
s hg38.chr4_GL000008v2_random        1793 2 +    209709 gt
s Gorilla_beringei.k141_1023189      6041 2 -      7875 gg
i Gorilla_beringei.k141_1023189  C 0 n 0
s Gorilla_gorilla.LT578344.1     57218193 2 + 151855818 gg
i Gorilla_gorilla.LT578344.1     C 0 C 0
s Pan_paniscus.KQ412053.1           68636 2 -     73861 NN
i Pan_paniscus.KQ412053.1        C 0 C 0
s Pan_troglodytes.NBAG03000105.1   138645 2 -    189131 gg
i Pan_troglodytes.NBAG03000105.1 I 182 I 356

a score=0.000000
s hg38.chr4_GL000008v2_random       1795 83 +    209709 tgacatgtaatgtgaactgagattgtgccactgcactccagcc-tgggtgacacagtgatatcc-----tgtcgaaagaaag-----gaatgga
s Gorilla_beringei.k141_2370269     2391 83 +      6094 tgaaatgaaatgtgagctaagaTTGTGCCACTGCATTCCAGT-CTGGGTGACAGTgtgagattc-----agttgaaataaag-----gaatcga
i Gorilla_beringei.k141_2370269 I 857 I 309
s Gorilla_gorilla.LT578344.1    57218195 80 + 151855818 ---aatggaatgggagctgagattgtgccactgcgctgcaggc-tgggtgacagagtgaggtac-----tctcgaaagaatg-----gaatgga
i Gorilla_gorilla.LT578344.1    C 0 N 0
s Pan_paniscus.KQ412053.1          68638  8 -     73861 NNNNNNNN--------------------------------------------------------------------------------------
i Pan_paniscus.KQ412053.1       C 0 C 0
s Pan_troglodytes.KZ622853.1      257387 83 +    258671 tgaaatgaaatgtgagctgagattgtgccactgcactccgtcc-tgggtgacagagtgagatcc-----tgtctaaggaaag-----gaattga
i Pan_troglodytes.KZ622853.1    I 118 I 210

a score=0.000000
s hg38.chr4_GL000008v2_random     1878 4 + 209709 atg---------c
s Gorilla_beringei.k141_2465350   5527 4 +  10038 atg---------g
i Gorilla_beringei.k141_2465350 I 125 C 0
s Pan_troglodytes.KZ622853.1    257680 4 + 258671 gtg---------g
i Pan_troglodytes.KZ622853.1    I 210 I 367
e Pan_paniscus.KQ412053.1        68646 0 -  73861 C

a score=0.000000
s hg38.chr4_GL000008v2_random      1882 19 + 209709 aatggagtgaaatgtaatg
s Gorilla_beringei.k141_2465350    5531 19 +  10038 aatgggatggaatcgaaag
i Gorilla_beringei.k141_2465350  C 0 C 0
s Pan_paniscus.KQ412053.1         68646 10 -  73861 ---------GAATGGAACG
i Pan_paniscus.KQ412053.1        C 0 C 0
s Pan_troglodytes.NBAG03000950.1 112320 19 - 135145 aatggaatggaatggaatg
i Pan_troglodytes.NBAG03000950.1 I 40082 T 12500

a score=0.000000
s hg38.chr4_GL000008v2_random      1901 19 + 209709 gaatggaatggagtggagt
s Gorilla_beringei.k141_2465350    5550 19 +  10038 gaatgaagtggagtggagt
i Gorilla_beringei.k141_2465350  C 0 C 0
s Pan_paniscus.KQ412053.1         68656 19 -  73861 Tattggagtggagtgcagt
i Pan_paniscus.KQ412053.1        C 0 C 0
s Pan_troglodytes.NBAG03000771.1 172626 19 + 210065 gagtggattggagtgaagt
i Pan_troglodytes.NBAG03000771.1 I 1315 I 24

a score=0.000000
s hg38.chr4_GL000008v2_random     1920 30 + 209709 ggaggggagtggagtggagtggactggagt
s Gorilla_beringei.k141_2465350   5569 30 +  10038 ggtatggaagggagtggagtggattggaat
i Gorilla_beringei.k141_2465350  C 0 C 0
s Pan_paniscus.KQ412053.1        68675 30 -  73861 ggagatgAGAGGAGTGGATCGGAGTGCAGT
i Pan_paniscus.KQ412053.1        C 0 C 0
s Pan_troglodytes.NBAG03000163.1 71118 29 - 223623 -gaatggaatggagtggagtggagtggagt
i Pan_troglodytes.NBAG03000163.1 T 13491 T 22517

a score=0.000000
s hg38.chr4_GL000008v2_random     1950 6 + 209709 gaaatg
s Gorilla_beringei.k141_2465350   5599 6 +  10038 ggaatg
i Gorilla_beringei.k141_2465350  C 0 C 0
s Pan_paniscus.KQ412053.1        68705 6 -  73861 GGaaag
i Pan_paniscus.KQ412053.1        C 0 C 0
s Pan_troglodytes.NBAG03000950.1 99839 6 - 135145 ggaatg
i Pan_troglodytes.NBAG03000950.1 T 12500 I 12680

a score=0.000000
s hg38.chr4_GL000008v2_random      1956 5 + 209709 gagtc
s Gorilla_beringei.k141_2465350    5605 5 +  10038 ggatg
i Gorilla_beringei.k141_2465350  C 0 C 0
s Pan_paniscus.KQ412053.1         68711 5 -  73861 gaata
i Pan_paniscus.KQ412053.1        C 0 C 0
s Pan_troglodytes.NBAG03000686.1 336452 5 - 341870 gaatg
i Pan_troglodytes.NBAG03000686.1 I 378 I 1317

a score=0.000000
s hg38.chr4_GL000008v2_random      1961 62 + 209709 gattgg--a-----atgagatg--------gagtga-------aatgg------aatggagtg-----gagtg--------------------gactagagtgaaatagagtgga
s Gorilla_beringei.k141_2465350    5610 73 +  10038 gaatgg--a-----atggaatg--------cagtga-------agtggggttacagtggagagcattagaggg--------------------gagtggaatggaatggaatgga
i Gorilla_beringei.k141_2465350  C 0 I 359
s Pan_paniscus.KQ412053.1         68716 62 -  73861 caatgg--a-----atggaatt--------gagtgg-------agtgg------agtggagtg-----gaatg--------------------gaatgaaatggagttgAACGGA
i Pan_paniscus.KQ412053.1        C 0 C 0
s Pan_troglodytes.NBAG03000105.1 139003 62 - 189131 caatgg--a-----atggaatt--------gagtgg-------agtgg------agtggagtg-----gaatg--------------------gaatgcaatggagttgaacgga
i Pan_troglodytes.NBAG03000105.1 I 356 C 0

a score=0.000000
s hg38.chr4_GL000008v2_random      2023 57 + 209709 a----aggaattggatggaatggaa-t--gaaa---------tggaatagtgaaaagaaatttgagctgagat
s Gorilla_beringei.k141_2370269    2783 47 +   6094 a----tggaatggaatggaatggaaagatgaaa---------tgtaatgt-------------gagctaagat
i Gorilla_beringei.k141_2370269  I 309 C 0
s Pan_paniscus.KQ412053.1         68778 32 -  73861 A----TGGAAcag-------------t--gaaa---------tgaaatga-------------gagcTAAGAC
i Pan_paniscus.KQ412053.1        C 0 C 0
s Pan_troglodytes.NBAG03000105.1 139065 32 - 189131 a----tggaacgg-------------t--gaaa---------tgaaatga-------------gagctAAGAC
i Pan_troglodytes.NBAG03000105.1 C 0 C 0

a score=0.000000
s hg38.chr4_GL000008v2_random      2080 30 + 209709 tgtgccactgcactccagc-------ctttgtgaaag
s Gorilla_beringei.k141_2370269    2830 30 +   6094 tatgtcactgcactccagtctgggtgtc-------ag
i Gorilla_beringei.k141_2370269  C 0 C 0
s Pan_paniscus.KQ412053.1         68810 30 -  73861 TTTGCCACTacactacagt-------ctgggtgacag
i Pan_paniscus.KQ412053.1        C 0 C 0
s Pan_troglodytes.NBAG03000105.1 139097 30 - 189131 TTTGCCACTACactacagt-------ctgggtgagag
i Pan_troglodytes.NBAG03000105.1 C 0 C 0

a score=0.000000
s hg38.chr4_GL000008v2_random      2110 17 + 209709 agtgagatcctatggaa
s Gorilla_beringei.k141_2370269    2860 17 +   6094 agtgagatccaatcGAA
i Gorilla_beringei.k141_2370269  C 0 C 0
s Pan_paniscus.KQ412053.1         68840 17 -  73861 agtgagattcagttgaa
i Pan_paniscus.KQ412053.1        C 0 C 0
s Pan_troglodytes.NBAG03000105.1 139127 17 - 189131 agtgagattcagttgaa
i Pan_troglodytes.NBAG03000105.1 C 0 C 0

a score=0.000000
s hg38.chr4_GL000008v2_random      2127 14 + 209709 agaaaggaatgtga
s Gorilla_beringei.k141_2370269    2877 14 +   6094 Ataaagcaatggaa
i Gorilla_beringei.k141_2370269  C 0 I 595
s Pan_paniscus.KQ412053.1         68857 14 -  73861 ataaaggaatcgaa
i Pan_paniscus.KQ412053.1        C 0 I 40
s Pan_troglodytes.NBAG03000105.1 139144 14 - 189131 ataaaggaatcgaa
i Pan_troglodytes.NBAG03000105.1 C 0 I 40

a score=0.000000
s hg38.chr4_GL000008v2_random      2141 44 + 209709 tggaatggagtggaattgtatggaatggaatggagtgaagtgga
s Gorilla_beringei.k141_1044046     505 13 +   1361 tggaatggagtgg-------------------------------
i Gorilla_beringei.k141_1044046  n 595 I 20
s Pan_paniscus.KQ412053.1         68911 44 -  73861 tgaagagcagtggattggagtggaatggagggGAAGgtaatgga
i Pan_paniscus.KQ412053.1        I 40 C 0
s Pan_troglodytes.NBAG03000105.1 139198 44 - 189131 tgaagagcagtggattggagtggaatggaggggaaggtaatgga
i Pan_troglodytes.NBAG03000105.1 I 40 C 0

a score=0.000000
s hg38.chr4_GL000008v2_random      2185 588 + 209709  
s Pan_paniscus.KQ412053.1         68955 363 -  73861  
i Pan_paniscus.KQ412053.1        C 0 I 5
s Pan_troglodytes.NBAG03000105.1 139242 363 - 189131  
i Pan_troglodytes.NBAG03000105.1 C 0 I 1046
e Gorilla_beringei.k141_1044046     518  20 +   1361 I

a score=0.000000
s hg38.chr4_GL000008v2_random      2773 450 + 209709 taatggaatggaatggagtggattggagtgcagtgaagtggagtggaatggaatggaatggaatggaatagtgaaatgaaatgtgaggtgggattctgccactgcactccagactgggtgacagagtgacatcctgtcgaatgtgaggaatggagcggaatggag---------------tggaatggaatgtagtggagtggagtggaatggaacggagtagaaaggaatggaacggaatggagtggagcggagtggagaggagtggagtcgaatggaatggaatgggatggaatcgaatggaatgaagtggaggggagtggagtggagttttgtggagaggagtggagtggtctggaattggatggaactgaatggagttcagtggagttgggtggagaggaatggagtacactggagtggaattgaatggaatggaatggagtggagttgagtgaagtgg-----ag
s Pan_paniscus.KQ412053.1         69323 243 -  73861 gagtggaatggaatggagtgcagtggagaggaGGGCAGTGGAAacgagtggaatggagtggaatgga-------------------------------------------------------------------------------------------------gtggagtggaatggagtggagtggaatggaatggaatggaatggaatggaacagaatggaacagaacagaatagaatgcagtggagttgagtggag-------------------------------------------------------------------------------------------------------------------tg-----TAGTGGA-----ATTGAGTGGAGTGGACCGGAgagcagtggaatggaatggagtggagtggattggagtggaatggagtgg-----aa
i Pan_paniscus.KQ412053.1        I 5 I 10
s Pan_troglodytes.NBAG03000771.1 172669 417 + 210065 -------------------------------------------tgaaatggaatggaatggaa-----tagtgaaatgaaatgtaagctgagattctgccactgcactccagattgggtgacagagagacatcCTGTCGAATGTgaggaatagaacggaatggagaggaatggaatagaatggaatggaatggagtagagtggagtggaatggaatggcgtggaaaggaatggaacggaatggagtggagtggagtggagaggagtggagtcgaatggaatggaatgggatggaatcgaatggaatgaagtggaggggagtggagtggagtgttgtggagaggagtggagtggtaCGGAATTGGATAGAATTGAATGGAGTTCAGTGGAGTTgggtggagaggaatggagtacactggagtggaattgaatggaatggaatggagtggagttgagtgaagtgg-----ag
i Pan_troglodytes.NBAG03000771.1 I 24 I 997
e Gorilla_beringei.k141_1044046     518  20 +   1361 I

a score=0.000000
s hg38.chr4_GL000008v2_random     3223 557 + 209709  
s Pan_paniscus.KQ412053.1        69576 426 -  73861  
i Pan_paniscus.KQ412053.1        I 10 I 15
s Pan_troglodytes.NBAG03003287.1 15864 533 +  22681  
i Pan_troglodytes.NBAG03003287.1 n 997 I 331
e Gorilla_beringei.k141_1044046    518  20 +   1361 I

a score=0.000000
s hg38.chr4_GL000008v2_random     3780 19 + 209709 atggaatggaatggaatgg
s Gorilla_beringei.k141_3239499   5193 19 -  15222 atggaatggaatggaatgg
i Gorilla_beringei.k141_3239499  I 2236 I 2602
s Pan_paniscus.KQ412053.1        70017 19 -  73861 aggaaatggagaggagtgg
i Pan_paniscus.KQ412053.1        I 15 C 0
s Pan_troglodytes.NBAG03003562.1  4807 19 +  18198 atggaatggaatggaatgg
i Pan_troglodytes.NBAG03003562.1 I 1983 I 221

a score=0.000000
s hg38.chr4_GL000008v2_random      3799 51 + 209709 agtggagtggagtgtagtggaatggag-----cgtaatggagtggaatggaatggg
s Gorilla_beringei.k141_1044046     538 51 +   1361 agagcagtggagtggagtggaatggag-----tggagtggagtggaatggaaagga
i Gorilla_beringei.k141_1044046  I 20 I 130
s Pan_paniscus.KQ412053.1         70036 47 -  73861 aatggagtggagtggagtggaaggGAA-----Tgaaggggagtggaggggag----
i Pan_paniscus.KQ412053.1        C 0 I 29
s Pan_troglodytes.NBAG03000950.1 112525 56 - 135145 agtggagtagagtggagtggaatgaagtggaatggaatggaatggaatgcagcaga
i Pan_troglodytes.NBAG03000950.1 I 12680 I 152

a score=0.000000
s hg38.chr4_GL000008v2_random      3850  90 + 209709 atggagtggaatggaatg-----gagtggaatgga----------gtaga-ttgaat-----tgg----ag----------tagagtggagttgact--------------------ggattgaagtgg-----aatggagtggagt----------gga
s Gorilla_beringei.k141_2465350    6042 100 +  10038 aaggagtggaatggaatg-----gagtggagtgga----------atggaatggagtggaa-tgg----aa----------tggaatggaatggaat--------------------ggaatggaatgg-----aatggaatggaatgga----a-tgga
i Gorilla_beringei.k141_2465350  I 359 I 88
s Pan_paniscus.KQ412053.1         70112  30 -  73861 ------------------------------------------------------------------------------------------------------------------------CTGGAGGGG-----AAAGGAGTGGAgaggagt-----gaa
i Pan_paniscus.KQ412053.1        I 29 C 0
s Pan_troglodytes.NBAG03000950.1 112733 100 - 135145 gtggaatgaaatggaatg-----taattgaatgga----------gtggactggagtg-aagtgg----ag----------tggagtggaatggaat--------------------ggaattgagtgg-----agtggagtggaatggagt-----gga
i Pan_troglodytes.NBAG03000950.1 I 152 T 58241

a score=0.000000
s hg38.chr4_GL000008v2_random      3940 18 + 209709 atggaatgga----------at-gga---ggg
s Gorilla_beringei.k141_1044046     719 18 +   1361 atggagtgga----------at-cga---aag
i Gorilla_beringei.k141_1044046  I 130 C 0
s Pan_paniscus.KQ412053.1         70142 18 -  73861 atggaatgga----------at-gga---gag
i Pan_paniscus.KQ412053.1        C 0 C 0
s Pan_troglodytes.NBAG03000686.1 337774 18 - 341870 atggagtgga----------at-gga---atg
i Pan_troglodytes.NBAG03000686.1 I 1317 I 344

a score=0.000000
s hg38.chr4_GL000008v2_random     3958 20 + 209709 gagtggagggaggt-----ggaggg
s Gorilla_beringei.k141_1044046    737 20 +   1361 gagtggagtggaat-----ggaatg
i Gorilla_beringei.k141_1044046  C 0 I 288
s Pan_paniscus.KQ412053.1        70160 20 -  73861 gagtgaaaaggaat-----ggagtg
i Pan_paniscus.KQ412053.1        C 0 C 0
s Pan_troglodytes.NBAG03000950.1 54592 20 - 135145 gaatggagtggaat-----tgaatg
i Pan_troglodytes.NBAG03000950.1 T 58241 I 24147

a score=0.000000
s hg38.chr4_GL000008v2_random     3978 16 + 209709 gaatg---gagtggagtgg
s Gorilla_beringei.k141_2465350   6230 16 +  10038 gaatg---gaatgcaatgc
i Gorilla_beringei.k141_2465350  I 88 I 25
s Pan_paniscus.KQ412053.1        70180 16 -  73861 gaatg---gaacagaacga
i Pan_paniscus.KQ412053.1        C 0 I 17
s Pan_troglodytes.NBAG03000950.1 78759 16 - 135145 gaatg---gagtggaatgg
i Pan_troglodytes.NBAG03000950.1 I 24147 I 34332

a score=0.000000
s hg38.chr4_GL000008v2_random     3994 16 + 209709 aatggaatgg-----t----------gaaat
s Gorilla_beringei.k141_2465350   6271 21 +  10038 aatggaatggaatggt----------gaagt
i Gorilla_beringei.k141_2465350  I 25 I 290
s Pan_troglodytes.NBAG03000163.1 48630 21 - 223623 -----aatag-----aatggaatcgtaaaaa
i Pan_troglodytes.NBAG03000163.1 T 22517 I 23512
e Pan_paniscus.KQ412053.1        70196 17 -  73861 I

a score=0.000000
s hg38.chr4_GL000008v2_random     4010 23 + 209709 aaaatgtgagctgagattgtgcc
s Gorilla_beringei.k141_748801    1132 22 +   3374 -aaatgtgagctgagattgttcc
i Gorilla_beringei.k141_748801   I 1081 C 0
s Pan_troglodytes.NBAG03003562.1  5047 23 +  18198 aaaatgtgagctgagattgtgcc
i Pan_troglodytes.NBAG03003562.1 I 221 I 169
e Pan_paniscus.KQ412053.1        70196 17 -  73861 I

a score=0.000000
s hg38.chr4_GL000008v2_random      4033 19 + 209709 actgtgttccagccttttt
s Gorilla_beringei.k141_748801     1154 19 +   3374 actgcactccagcctgggt
i Gorilla_beringei.k141_748801   C 0 I 597
s Pan_troglodytes.NBAG03000950.1 113107 19 - 135145 actgcactgcaaactgggt
i Pan_troglodytes.NBAG03000950.1 I 34332 I 252
e Pan_paniscus.KQ412053.1         70196 17 -  73861 I

a score=0.000000
s hg38.chr4_GL000008v2_random      4052 16 + 209709 tgacatagtgagatcc
s Gorilla_beringei.k141_2465350    6582 16 +  10038 gagtggagtgaaatgg
i Gorilla_beringei.k141_2465350  I 290 I 19
s Pan_troglodytes.NBAG03000950.1 113378 16 - 135145 gagtgtagtggaatgg
i Pan_troglodytes.NBAG03000950.1 I 252 I 12879
e Pan_paniscus.KQ412053.1         70196 17 -  73861 I

a score=0.000000
s hg38.chr4_GL000008v2_random     4068 23 + 209709 catcaa----------a------agaaaggactggaatg
s Gorilla_beringei.k141_2370269   3486 29 +   6094 aatgga----------atggaatggagtgtagtggaata
i Gorilla_beringei.k141_2370269  I 595 I 161
s Pan_paniscus.KQ412053.1        70213  7 -  73861 --------------------------------tggaatg
i Pan_paniscus.KQ412053.1        I 17 C 0
s Pan_troglodytes.NBAG03000163.1 72163 28 - 223623 aattga----------atgaaatggaatggaatggaat-
i Pan_troglodytes.NBAG03000163.1 I 23512 I 14554

a score=0.000000
s hg38.chr4_GL000008v2_random     4091 94 + 209709 gaatggggtg-----ga-----atggaatggag-----tagaatggaacggagtg-----gattg-----gattggagtggagtgcattggagtggagtggagtccagtgaaatggagt
s Gorilla_beringei.k141_2465350   6617 99 +  10038 gagtggaatgtaatgga-----gtggagaagaa-----tggagtggagtgtagtg-----gaatg-----ggatgggatggaatagaatggaatggaatgtaatgcagtggactggaat
i Gorilla_beringei.k141_2465350  I 19 I 286
s Pan_paniscus.KQ412053.1        70220 94 -  73861 tactggagtg-----ga-----gtgcagtgcag-----ttgagtggagtggattg-----gagcg-----caagtgaatggaatggaatggaaaggaaaggagtggagtggaatggaat
i Pan_paniscus.KQ412053.1        C 0 C 0
s Pan_troglodytes.NBAG03003287.1 16728 93 +  22681 gaatggggtg-----ga-----atggaatggag-----tagaatggaacggagt------gagtg-----gattggagtggagtgcattggagtggagtggagtcgagtgaaatggagt
i Pan_troglodytes.NBAG03003287.1 I 331 I 475

a score=0.000000
s hg38.chr4_GL000008v2_random      4185  5 + 209709 g-----aaat
s Gorilla_beringei.k141_2370269    3676 10 +   6094 gtaatggaat
i Gorilla_beringei.k141_2370269  I 161 I 45
s Pan_paniscus.KQ412053.1         70314  5 -  73861 g-----gaat
i Pan_paniscus.KQ412053.1        C 0 C 0
s Pan_troglodytes.NBAG03000105.1 140651  5 - 189131 g-----gaat
i Pan_troglodytes.NBAG03000105.1 I 1046 C 0

a score=0.000000
s hg38.chr4_GL000008v2_random      4190 13 + 209709 ggaatggaaggga
s Gorilla_beringei.k141_165600     1841 13 +   6442 cgaatggaatggc
i Gorilla_beringei.k141_165600   n 45 C 0
s Pan_paniscus.KQ412053.1         70319 13 -  73861 ggaatggaatgga
i Pan_paniscus.KQ412053.1        C 0 C 0
s Pan_troglodytes.NBAG03000105.1 140656 13 - 189131 ggaatggaatgga
i Pan_troglodytes.NBAG03000105.1 C 0 I 280

a score=0.000000
s hg38.chr4_GL000008v2_random     4203 7 + 209709 atggaat
s Gorilla_beringei.k141_165600    1854 7 +   6442 gtggagt
i Gorilla_beringei.k141_165600   C 0 I 899
s Pan_paniscus.KQ412053.1        70332 7 -  73861 atggaat
i Pan_paniscus.KQ412053.1        C 0 C 0
s Pan_troglodytes.NBAG03003562.1  5239 7 +  18198 atggAAT
i Pan_troglodytes.NBAG03003562.1 I 169 I 88

a score=0.000000
s hg38.chr4_GL000008v2_random     4210 99 + 209709 ggcatgtagtggagtggggtggagtgaatttgagtagagtagggtggaatggagtggaatggagtggaatggaatgggatggaagggaatggcatggag
s Gorilla_beringei.k141_2370269   3731 99 +   6094 ggagtggaatggggtggagtggagtggagtggagaggaatggagtggaatggagtatagtggagtggaaaggagtgaaatggagtggaatggaatggag
i Gorilla_beringei.k141_2370269  I 45 C 0
s Pan_paniscus.KQ412053.1        70339 99 -  73861 ggattcaagtggagtggagtggagtggaatggagagaactggaaactgaaggaaaagaatggagtggagtgaaatggagaggaatggaatggaacagac
i Pan_paniscus.KQ412053.1        C 0 I 42
s Pan_troglodytes.NBAG03000163.1 86745 94 - 223623 ggaatgtagtggagtggaatgggattgaatggaatggagtggagtggagtggagtggtgtggagtgggatggaatagaatggaatggaatgcca-----
i Pan_troglodytes.NBAG03000163.1 I 14554 T 13008

a score=0.000000
s hg38.chr4_GL000008v2_random     4309  81 + 209709 tgtag-----tggagtggactggagtgggttag-----------------------------aatggaatt--gaatggaatggtatggaatggaatggaa------tggaatgcaatggaat
s Gorilla_beringei.k141_2370269   3830 116 +   6094 tgcagcagaatggaatggagtggaatggcacagaatggtac-g-g-aatgaaatggaatcg-aatggaaca--tattggagtggagtggagttgagtggactggat-cggagtgcagtggaat
i Gorilla_beringei.k141_2370269  C 0 I 9
s Pan_paniscus.KQ412053.1        70480  39 -  73861 -----------------------------------------------------------------------------------caatggaatggaatggaatgcaa-tggaatggaatggaat
i Pan_paniscus.KQ412053.1        I 42 C 0
s Pan_troglodytes.NBAG03003562.1  5334 116 +  18198 tggagtggaatggagtggattggagtggagtagagtggaat-g-g-aaaggaatggaat-gaaatggaatg--gaatggaatggtatggaatggaatggaatgcaa-tggaatggaatggaat
i Pan_troglodytes.NBAG03003562.1 I 88 I 430

a score=0.000000
s hg38.chr4_GL000008v2_random      4390 68 + 209709 ggaatg-----gtgaaattgaatgtgagctgaGATAGTGCGACTCCACTCCAGCCTGGGTGACAGATTGAGAT
s Gorilla_beringei.k141_165600     2760 14 +   6442 ggagtgaaaccgag-----------------------------------------------------------
i Gorilla_beringei.k141_165600   I 899 I 180
s Pan_paniscus.KQ412053.1         70519 68 -  73861 ggaatg-----gtgaaatGTAATCATAGCTAAGATTGTGTCACGGCACTCCAGACAGGGTGTCACAAAGAGAT
i Pan_paniscus.KQ412053.1        C 0 C 0
s Pan_troglodytes.NBAG03000686.1 338136 68 - 341870 ggaatg-----gtgaaatgaaatgtgagctaagattgtgccactgcactccagtctgtgtgacagagtgagat
i Pan_troglodytes.NBAG03000686.1 I 344 I 755

a score=0.000000
s hg38.chr4_GL000008v2_random      4458 58 + 209709 CCTGtcaaaagaaaggaatggaattgaatggaggggaatggaatgggatggagtgggg
s Gorilla_beringei.k141_2370269    3955 30 +   6094 ----------------------------tggaatggaatggggtggagtggagtggag
i Gorilla_beringei.k141_2370269  I 9 I 283
s Pan_paniscus.KQ412053.1         70587 58 -  73861 CCAATCGAAATAaagcaatgaaatggaatggagtagaatgcaatggaatgaagtGGAT
i Pan_paniscus.KQ412053.1        C 0 C 0
s Pan_troglodytes.NBAG03000105.1 140949 58 - 189131 CCAATCGAAATaaagcaatgaaatggaatggagtagaatggaatggaatggagtgcat
i Pan_troglodytes.NBAG03000105.1 I 280 I 299

a score=0.000000
s hg38.chr4_GL000008v2_random      4516 200 + 209709 tggagtggagtggagtggag-----gggactggatttgagtggagtctagtggaacagagtggaatggaatggg-----gtggagtggaacggaatggaatggagaggagtggtgtg----gag----------tggagtggattggaattcaattggatggaatgatatggagtggagtg-------------------------gaatggaatggaatggaatggaatggaatggaatggaatggaa
s Gorilla_beringei.k141_165600     2954 175 +   6442 ttgagtggagtggattggag-----tgcagtggaatgg----------aatggaatgccattggatggaaagga-----atggggtggagtggaatggaatggaatgaagtagagtg----gaa----------tagagtggaatgga----------gtggagtggaatggaatggagtg-------------------------g-----actagaatggaatggagtggaatggaatggaatggag
i Gorilla_beringei.k141_165600   I 180 I 78
s Pan_paniscus.KQ412053.1         70645 180 -  73861 GGGAATGGAACGCAGTGAAA-----TGGAGTGGATGGG----------AATGGAACGGAGTGAAATGGAGcgga-----gtggagtggattggaatggaatgcaagagagtagagtg----gag----------tggagtggaatgga----------gtggaaaagAGTGAAACGGTGTG-------------------------TAATGGAATGGAGAGGTGTGGAATGGAAAGGAGGGGAATGGAA
i Pan_paniscus.KQ412053.1        C 0 C 0
s Pan_troglodytes.NBAG03000950.1 126273 195 - 135145 tggaatggaatggaatggaa-----tggaatggaatgg----------aattgaacaggatggaatggtatggaatagagtggagtggagtggaatgaaatgggatagagtggattg----gaatggagtggagtagcatagagtgga----------gtggagtggagaggagtgtagtg-------------------------gaatggaatggaatggagtggagtgaaatggaatggaatgcaa
i Pan_troglodytes.NBAG03000950.1 I 12879 I 195

a score=0.000000
s hg38.chr4_GL000008v2_random      4716 1 + 209709 t
e Pan_paniscus.KQ412053.1         70825 0 -  73861 C
e Pan_troglodytes.NBAG03000950.1 126468 195 - 135145 I
e Gorilla_beringei.k141_165600     3129 78 +   6442 I

a score=0.000000
s hg38.chr4_GL000008v2_random     4717 145 + 209709 tggaatggaatggaatggaatggaatggaatgttgtggagtgtattggaatggagtggaatggagtgaaatggagtgtaatgtaatgtagtggaatggagtggagtggagtgcagtggagaagggtgtaggggaatggaatggaa
s Pan_paniscus.KQ412053.1        70825  99 -  73861 AGGAACAGAAtgaaatggaacggaatggaatttACAGGAATGGAGTGCACtggagttg----------agtggagtggaTAGGAGTgcagttgaatggaatggaatgga------------------------------------
i Pan_paniscus.KQ412053.1        C 0 C 0
s Pan_troglodytes.NBAG03003287.1 17296 135 +  22681 tggattggaatggaatggaatggaatggaatgttgtggagtgtattggaatggagttg----------aatggagtgtaatgtaatgtagtggaatggagtggagtggagtgcagtggagaagGGTgtaggggaatggaatggaa
i Pan_troglodytes.NBAG03003287.1 I 475 I 2186
e Gorilla_beringei.k141_165600    3129  78 +   6442 I

a score=0.000000
s hg38.chr4_GL000008v2_random     4862 50 + 209709 tagtgaaatgaaatgtgagctaagattctcccactgcactccagactgtg
s Gorilla_beringei.k141_748801    1770 50 +   3374 tggcaaaatgaaacgtgacctgagattgtgccactgcactccggtctggg
i Gorilla_beringei.k141_748801   I 597 C 0
s Pan_troglodytes.NBAG03003562.1  5880 50 +  18198 tagtgaaatgaaatgtggGCTGAGATTCTCCCTCTGCACTCCAGactgtg
i Pan_troglodytes.NBAG03003562.1 I 430 C 0
e Pan_paniscus.KQ412053.1        70924  0 -  73861 C

a score=0.000000
s hg38.chr4_GL000008v2_random     4912 32 + 209709 tgacagaatgagatcctgtcgaatggaattga
s Gorilla_beringei.k141_748801    1820 28 +   3374 tgacagagagagatcctgtcgaaagaaa----
i Gorilla_beringei.k141_748801   C 0 I 437
s Pan_paniscus.KQ412053.1        70924 20 -  73861 ------------atcaacctgagtggaatgga
i Pan_paniscus.KQ412053.1        C 0 C 0
s Pan_troglodytes.NBAG03003562.1  5930 32 +  18198 tgacagaatgagatcctgtcgaatggaattga
i Pan_troglodytes.NBAG03003562.1 C 0 I 86

a score=0.000000
s hg38.chr4_GL000008v2_random      4944 2 + 209709 at
s Pan_paniscus.KQ412053.1         70944 2 -  73861 at
i Pan_paniscus.KQ412053.1        C 0 C 0
s Pan_troglodytes.NBAG03000105.1 141306 2 - 189131 at
i Pan_troglodytes.NBAG03000105.1 I 299 C 0
e Gorilla_beringei.k141_748801     1848 437 +   3374 I

a score=0.000000
s hg38.chr4_GL000008v2_random      4946 84 + 209709 ag-agtgcaatggaatg------gagtgcagtggagtggagcagagtggagtggagtggagtgg-----aatggaatggaatgggat-----ggaatcgaa
s Gorilla_beringei.k141_165600     3207 89 +   6442 gg-actggaatgcaatggagta-gaatgggaaggaaaggagtggagtggaatggcatggagtgg-----aatgaagtggagtggagt-----gtaatggag
i Gorilla_beringei.k141_165600   I 78 I 53
s Pan_paniscus.KQ412053.1         70946 40 -  73861 gt-aatggaatggaatg------gaatggaatataatggaatggaat------------------------------------------------------
i Pan_paniscus.KQ412053.1        C 0 I 14
s Pan_troglodytes.NBAG03000105.1 141308 84 - 189131 gt-aatggaatggaatg------gaatggaatataatggaatggaatggaatggaatggaatat-----aatggaatggaatagaat-----ggaatggaa
i Pan_troglodytes.NBAG03000105.1 C 0 I 414

a score=0.000000
s hg38.chr4_GL000008v2_random     5030 53 + 209709 tggtatgaagtggagg---------------ggaatg--gagttgagtggagggacgaggagtggaatgg
s Gorilla_beringei.k141_3239499   7814 53 -  15222 tggaatggaatggaat---------------ttagtg--taatggaatggagtagagtggaatggaatgg
i Gorilla_beringei.k141_3239499  I 2602 I 740
s Pan_paniscus.KQ412053.1        71000 53 -  73861 tcaacccgagtggaat---------------ggaatg--gaacggaacggaaAGGAACgcaaaggaatgc
i Pan_paniscus.KQ412053.1        I 14 C 0
s Pan_troglodytes.NBAG03003562.1  6048 53 +  18198 tggtatgaagtggagg---------------ggagtg--gagttgagtggagggacgaggagttgaatgg
i Pan_troglodytes.NBAG03003562.1 I 86 I 202

a score=0.000000
s hg38.chr4_GL000008v2_random      5083 40 + 209709 aatggaattggaaggaatgggatggagtggagtg-----gagt-----gg
s Gorilla_beringei.k141_165600     3349 40 +   6442 aatggagtggaatggaatggagtggaatggaaag-----gaat-----gg
i Gorilla_beringei.k141_165600   I 53 I 486
s Pan_paniscus.KQ412053.1         71053 40 -  73861 aatggaatgcaatggcatgtagtggaatggaatc-----aact-----gg
i Pan_paniscus.KQ412053.1        C 0 C 0
s Pan_troglodytes.NBAG03000950.1 126663 40 - 135145 aatggaatcgaatggaatggaaaggaatggagtg-----gaat-----gg
i Pan_troglodytes.NBAG03000950.1 I 195 T 25514

a score=0.000000
s hg38.chr4_GL000008v2_random      5123 10 + 209709 ggtggagagt
s Gorilla_beringei.k141_2370269    4268 10 +   6094 aggggagtgg
i Gorilla_beringei.k141_2370269  I 283 C 0
s Pan_paniscus.KQ412053.1         71093  9 -  73861 aatggaaa-a
i Pan_paniscus.KQ412053.1        C 0 C 0
s Pan_troglodytes.NBAG03000950.1 101189 10 - 135145 agtggactgg
i Pan_troglodytes.NBAG03000950.1 T 25514 I 25504

a score=0.000000
s hg38.chr4_GL000008v2_random      5133 68 + 209709 agtggagtag------------------------------agtggaatggaatggaatgcaatgga-----atgg-agtggagt-----gga---gtagagtgga------------ttggagt
s Gorilla_beringei.k141_2370269    4278 73 +   6094 aatggaatgg------------------------------aatggaatggataggagtggaatggaatagagtgg-acaggaat-----gga---atagagtgga------------gtggaat
i Gorilla_beringei.k141_2370269  C 0 I 207
s Pan_paniscus.KQ412053.1         71102 38 -  73861 aatggaatgg------------------------------aatggaaaggaatggaatggaatgga-----at---------------------------------------------------
i Pan_paniscus.KQ412053.1        C 0 I 10
s Pan_troglodytes.NBAG03000950.1 126703 98 - 135145 aatggaatggcgggGGAAAGAGTGTTGCGGAGTGGAgtttaatggagtggaatggaatggaatgaa-----gtgg-agtggagt-----gaa---gtggagtgga------------atggagt
i Pan_troglodytes.NBAG03000950.1 I 25504 T 37423

a score=0.000000
s hg38.chr4_GL000008v2_random     5201 52 + 209709 gtaatggaatagaatggaatggataggaat-----ggaatggtat---------------agaatggaatga
s Gorilla_beringei.k141_2465350   7002 52 +  10038 ggacaagaatggcgtggagaggagtggaat-----ggaatggaat---------------ggaatagaatgg
i Gorilla_beringei.k141_2465350  I 286 C 0
s Pan_troglodytes.NBAG03000163.1 73831 54 - 223623 ggaatggaatggaatggaatggaatagagtagagaggagtggagt---------------ggaatggag---
i Pan_troglodytes.NBAG03000163.1 T 13008 T 12875
e Pan_paniscus.KQ412053.1        71140 10 -  73861 I

a score=0.000000
s hg38.chr4_GL000008v2_random     5253 37 + 209709 t------gaaat------------------------------gaaatatgag----ctgagattgtgccactgcact
s Gorilla_beringei.k141_2465350   7054 37 +  10038 t------gaaac------------------------------gaaatgtgag----ctgaggttgtgccactgcact
i Gorilla_beringei.k141_2465350  C 0 C 0
s Pan_troglodytes.NBAG03000950.1 89378 67 - 135145 t------ggaatgcagtggaatggagagaaattcaatggaatggaatggaat----ggaatggaatggaatggaatg
i Pan_troglodytes.NBAG03000950.1 T 37423 I 421
e Pan_paniscus.KQ412053.1        71140 10 -  73861 I

a score=0.000000
s hg38.chr4_GL000008v2_random     5290 3 + 209709 gca
s Gorilla_beringei.k141_2465350   7091 3 +  10038 tca
i Gorilla_beringei.k141_2465350  C 0 I 6
s Pan_troglodytes.NBAG03003562.1  6303 3 +  18198 cca
i Pan_troglodytes.NBAG03003562.1 I 202 C 0
e Pan_paniscus.KQ412053.1        71140 10 -  73861 I

a score=0.000000
s hg38.chr4_GL000008v2_random     5293 6 + 209709 gcctgg
s Gorilla_beringei.k141_748801    2285 6 +   3374 gcatgg
i Gorilla_beringei.k141_748801   I 437 I 20
s Pan_troglodytes.NBAG03003562.1  6306 6 +  18198 gcctgg
i Pan_troglodytes.NBAG03003562.1 C 0 C 0
e Pan_paniscus.KQ412053.1        71140 10 -  73861 I

a score=0.000000
s hg38.chr4_GL000008v2_random     5299 2 + 209709 gt
s Gorilla_beringei.k141_2465350   7100 2 +  10038 gt
i Gorilla_beringei.k141_2465350  I 6 C 0
s Pan_troglodytes.NBAG03003562.1  6312 2 +  18198 gt
i Pan_troglodytes.NBAG03003562.1 C 0 C 0
e Pan_paniscus.KQ412053.1        71140 10 -  73861 I

a score=0.000000
s hg38.chr4_GL000008v2_random     5301 12 + 209709 g----acagagtgaga
s Gorilla_beringei.k141_2465350   7102 12 +  10038 g----agagagtgaga
i Gorilla_beringei.k141_2465350  C 0 C 0
s Pan_troglodytes.NBAG03003562.1  6314 12 +  18198 g----acagagtgaga
i Pan_troglodytes.NBAG03003562.1 C 0 C 0
e Pan_paniscus.KQ412053.1        71140 10 -  73861 I

a score=0.000000
s hg38.chr4_GL000008v2_random     5313 3 + 209709 tcc
s Gorilla_beringei.k141_2465350   7114 3 +  10038 tcc
i Gorilla_beringei.k141_2465350  C 0 C 0
s Pan_troglodytes.NBAG03003562.1  6326 3 +  18198 tcc
i Pan_troglodytes.NBAG03003562.1 C 0 C 0
e Pan_paniscus.KQ412053.1        71140 10 -  73861 I

a score=0.000000
s hg38.chr4_GL000008v2_random     5316 3 + 209709 t---gt
s Gorilla_beringei.k141_2465350   7117 3 +  10038 t---gt
i Gorilla_beringei.k141_2465350  C 0 I 77
s Pan_troglodytes.NBAG03003562.1  6329 3 +  18198 t---gt
i Pan_troglodytes.NBAG03003562.1 C 0 C 0
e Pan_paniscus.KQ412053.1        71140 10 -  73861 I

a score=0.000000
s hg38.chr4_GL000008v2_random     5319 1 + 209709 c
s Gorilla_beringei.k141_748801    2311 1 +   3374 t
i Gorilla_beringei.k141_748801   I 20 C 0
s Pan_troglodytes.NBAG03003562.1  6332 1 +  18198 t
i Pan_troglodytes.NBAG03003562.1 C 0 C 0
e Pan_paniscus.KQ412053.1        71140 10 -  73861 I

a score=0.000000
s hg38.chr4_GL000008v2_random     5320 46 + 209709 aaaggaaaggaatggaatggaa---aggtgt-----gga-atggaatggaatgga
s Gorilla_beringei.k141_748801    2312 46 +   3374 gaaagaaaggaatggaatggaa---tggagt-----gga-atggaatggaatgga
i Gorilla_beringei.k141_748801   C 0 I 36
s Pan_paniscus.KQ412053.1        71150 43 -  73861 ---ggaatggaatggaatggaa---tgtaac-----gga-atgcaatggaatgga
i Pan_paniscus.KQ412053.1        I 10 I 30
s Pan_troglodytes.NBAG03003562.1  6333 46 +  18198 aaaggaaaggaatggaatggaa---aggagt-----gga-atggaatggaatgga
i Pan_troglodytes.NBAG03003562.1 C 0 I 35

a score=0.000000
s hg38.chr4_GL000008v2_random     5366 5 + 209709 atgga
s Gorilla_beringei.k141_165600    3875 5 +   6442 gtgga
i Gorilla_beringei.k141_165600   I 486 C 0
s Pan_paniscus.KQ412053.1        71223 1 -  73861 ----a
i Pan_paniscus.KQ412053.1        I 30 C 0
s Pan_troglodytes.NBAG03003562.1  6414 5 +  18198 atgga
i Pan_troglodytes.NBAG03003562.1 I 35 I 293

a score=0.000000
s hg38.chr4_GL000008v2_random      5371  5 + 209709 t--------------tgat
s Gorilla_beringei.k141_165600     3880  5 +   6442 a--------------aggt
i Gorilla_beringei.k141_165600   C 0 I 456
s Pan_paniscus.KQ412053.1         71224  5 -  73861 t--------------caac
i Pan_paniscus.KQ412053.1        C 0 C 0
s Pan_troglodytes.NBAG03000686.1 338959 19 - 341870 tggagtggaaataaGTAAG
i Pan_troglodytes.NBAG03000686.1 I 755 C 0

a score=0.000000
s hg38.chr4_GL000008v2_random      5376 38 + 209709 tggagtgca----gt---------------ggagtggaggtgagtggagttcacagt
s Gorilla_beringei.k141_2465350    7197 42 +  10038 tggaatgcatgtcat---------------ggaatggaatgcagtggagtggagggg
i Gorilla_beringei.k141_2465350  I 77 I 233
s Pan_paniscus.KQ412053.1         71229 28 -  73861 aagagtgga----at---------------ggaatagaatggaatgg----------
i Pan_paniscus.KQ412053.1        C 0 C 0
s Pan_troglodytes.NBAG03000686.1 338978 43 - 341870 AGGAGTGGA----GTAGAGGGgagtagattggaatggaatggagggg----------
i Pan_troglodytes.NBAG03000686.1 C 0 I 255

a score=0.000000
s hg38.chr4_GL000008v2_random     5414 41 + 209709 agtgcaatggaatggaatg-----g----agtg-------gagtcgagtgcagtgga
s Gorilla_beringei.k141_2370269   4558 41 +   6094 aatggaatggaacggaatg-----g----aacg-------gaatggaaaggagtgga
i Gorilla_beringei.k141_2370269  I 207 I 380
s Pan_paniscus.KQ412053.1        71257 31 -  73861 aa----------tggaatg-----g----aatg-------gaatgaaacggaatgga
i Pan_paniscus.KQ412053.1        C 0 C 0
s Pan_troglodytes.NBAG03000163.1 61010 48 - 223623 aatgcaatggaatggaatg-----g----aatggaaagttcagatgagtggattgga
i Pan_troglodytes.NBAG03000163.1 T 12875 I 130

a score=0.000000
s hg38.chr4_GL000008v2_random     5455 101 + 209709 gtgggttgga-a----------tggaat----------ggagt----------ggaatga-----aatgggatggaatggaatggagtggagtggagtt---------------cacaggagtgcaatggaatgg-----g---atggaatggaatggaa
s Gorilla_beringei.k141_2465350   7472 111 +  10038 gtggaatgga-a----------tgggat----------ggagtagagtgccgaggagtgg-----agtgaaatggagtgtagtggagtgcagtggagtg---------------gagtggaatggaatggagtgg-----a---atgaaattgaatgcaa
i Gorilla_beringei.k141_2465350  I 233 I 52
s Pan_paniscus.KQ412053.1        71288  66 -  73861 at-caacgagtg----------tggaat----------ggaat----------ggaatcg-----aatggaaggGAATCAAAGAGAAGGGAatcgaatg---------------gca-------------------------------------------
i Pan_paniscus.KQ412053.1        C 0 C 0
s Pan_troglodytes.NBAG03000163.1 61188 116 - 223623 gtggaatgga-aagcaatggagtgGAGA----------TGAGT----------AGAATggagtataatggaatggaatggaatggaatggaatggaatg---------------gaatcgaatggaacggaatgg-----aagggtgAAGTGAAAtt---
i Pan_troglodytes.NBAG03000163.1 I 130 I 209

a score=0.000000
s hg38.chr4_GL000008v2_random      5556 8 + 209709 tggaatgg
s Gorilla_beringei.k141_748801     2394 8 +   3374 tgcaatgg
i Gorilla_beringei.k141_748801   I 36 I 25
s Pan_troglodytes.NBAG03000105.1 141806 8 - 189131 tggaatgg
i Pan_troglodytes.NBAG03000105.1 I 414 I 734
e Pan_paniscus.KQ412053.1         71354 0 -  73861 C

a score=0.000000
s hg38.chr4_GL000008v2_random     5564 50 + 209709 aatg-----gaatg--------------------------gaatggaatggaatacaat----ggag----------------tggaatgcaatggaatgc
s Gorilla_beringei.k141_165600    4341 70 +   6442 aaag-----gaatg--------------------------gaacggagtggagtggaatgcactgaagttcagtgcagtggatccgagtgcagtggaatgg
i Gorilla_beringei.k141_165600   I 456 C 0
s Pan_paniscus.KQ412053.1        71354 40 -  73861 ------------tg--------------------------gaatggaatggaatctatc----CTAg----------------tggaatgtaatgtaa---
i Pan_paniscus.KQ412053.1        C 0 C 0
s Pan_troglodytes.NBAG03000950.1 89866 75 - 135145 agag-----gaatggaattgaGGGAtgtagaatggaata-gagtggagtggagtggaaa----ggaa----------------tggagtggattgaaatca
i Pan_troglodytes.NBAG03000950.1 I 421 I 38017

a score=0.000000
s hg38.chr4_GL000008v2_random     5614 12 + 209709 aatcgaatggaa
s Gorilla_beringei.k141_165600    4411 12 +   6442 aatggaatggaa
i Gorilla_beringei.k141_165600   C 0 C 0
s Pan_troglodytes.NBAG03003562.1  6712 12 +  18198 aatcgaatggaa
i Pan_troglodytes.NBAG03003562.1 I 293 C 0
e Pan_paniscus.KQ412053.1        71394  0 -  73861 C

a score=0.000000
s hg38.chr4_GL000008v2_random     5626 2 + 209709 tt
s Gorilla_beringei.k141_165600    4423 2 +   6442 tg
i Gorilla_beringei.k141_165600   C 0 I 29
s Pan_troglodytes.NBAG03003562.1  6724 2 +  18198 tt
i Pan_troglodytes.NBAG03003562.1 C 0 C 0
e Pan_paniscus.KQ412053.1        71394 0 -  73861 C

a score=0.000000
s hg38.chr4_GL000008v2_random     5628 50 + 209709 gtgaaat-ta-aatg-------tgagctgagatagtgccactgcactccagcctgtgtg
s Gorilla_beringei.k141_748801    2427 49 +   3374 -tgaaat-ga-aatg-------tgacctgagattgtgccactgcactccagcctgggtg
i Gorilla_beringei.k141_748801   I 25 I 310
s Pan_troglodytes.NBAG03003562.1  6726 50 +  18198 gtgaaat-ta-aatg-------tgagctgagatagtgccactgcactccagcctgtgtg
i Pan_troglodytes.NBAG03003562.1 C 0 I 734
e Pan_paniscus.KQ412053.1        71394  0 -  73861 C

a score=0.000000
s hg38.chr4_GL000008v2_random     5678 40 + 209709 acagagtgagatcctgttgaaag-----aaa---ttaatg-----gaatgtaa
s Gorilla_beringei.k141_2465350   7635 40 +  10038 ACAAAGCGAGATTTtgtcgaaag-----aaa---ggaatg-----gaatggaa
i Gorilla_beringei.k141_2465350  I 52 I 16
s Pan_paniscus.KQ412053.1        71394 10 -  73861 --------------------------------------tg-----gaatggaa
i Pan_paniscus.KQ412053.1        C 0 C 0
s Pan_troglodytes.NBAG03000163.1 61513 45 - 223623 acagagtgagatcctgtcgaaagaaaacaaa---ggaatg-----gaatggaa
i Pan_troglodytes.NBAG03000163.1 I 209 C 0

a score=0.000000
s hg38.chr4_GL000008v2_random     5718 48 + 209709 gagagtgaattatactggaatggaatggattggagtggagtggagagg
s Gorilla_beringei.k141_165600    4454 37 +   6442 -----------ggaatgtaatggagtggtgtggagtggagtggagtgc
i Gorilla_beringei.k141_165600   I 29 C 0
s Pan_paniscus.KQ412053.1        71404 48 -  73861 tggaattgaatcaacgcgagacgaatggaaaggaatggaatggaatgg
i Pan_paniscus.KQ412053.1        C 0 C 0
s Pan_troglodytes.NBAG03000163.1 61558 48 - 223623 tggagtggaatggaatggattgggatttaatggagtggagtggagtgg
i Pan_troglodytes.NBAG03000163.1 C 0 I 595

a score=0.000000
s hg38.chr4_GL000008v2_random      5766 70 + 209709 a-----atggagctt----a-----atggagtggaaggga-----atgggaaggagtggaatagaatggagtggagtggag-----tg-------------------------gagtgg
s Gorilla_beringei.k141_165600     4491 90 +   6442 a-----gtggaatgg----a-----atggagtggaatggc-----atggaatggattggaatggaatggaatggagtggagtgaaatg----------gaatgaagtggattggagtgg
i Gorilla_beringei.k141_165600   C 0 C 0
s Pan_paniscus.KQ412053.1         71452 48 -  73861 a-----atggaatgg----a-----atggaatagaatggc-----aTGGCATGGcacggaatggaaa----------------------------------------------------
i Pan_paniscus.KQ412053.1        C 0 I 12
s Pan_troglodytes.NBAG03000686.1 339276 95 - 341870 a-----gtggaatgg----a-----aatgaatgaaatgta-----atgtaatggaatggaatggaagggaacggagtGAAG-----TAGAGTGGAGTGGGTTTCAGTAGAATGGATCag
i Pan_troglodytes.NBAG03000686.1 I 255 C 0

a score=0.000000
s hg38.chr4_GL000008v2_random      5836  95 + 209709 a-----gagaaatgaggtaaaatgcaat---------gggatggac----tggaatggagtggag------tggagtggagtgaa-----ttggaatggagtggatttgactggattgcagtgg
s Gorilla_beringei.k141_165600     4581 109 +   6442 a-----atggaaagaagtagaatggaatggggtggagggaatggaa----tggggtggagtggagatgag-tggagtggagtgga-----gtggaatggattggagtggaatggacaggagtgg
i Gorilla_beringei.k141_165600   C 0 I 253
s Pan_paniscus.KQ412053.1         71512  85 -  73861 a-----g-----tcg-----tacggaat---------ggaacggaa----tgcaatagaatgcaa------tggaatagaatgga-----atggaatcaacctgagtggaatggaatggaatgg
i Pan_paniscus.KQ412053.1        I 12 C 0
s Pan_troglodytes.NBAG03000686.1 339371 100 - 341870 attgcagtggaatgg-----aatggaat---------ggagtggag----tggagtggagttgaa------tagaatggaatggtgtggtatggaatggaatagagtggaatagaatggaatgg
i Pan_troglodytes.NBAG03000686.1 C 0 C 0

a score=0.000000
s hg38.chr4_GL000008v2_random      5931  87 + 209709 aatgaagtggagtg---ga-----------atgcaatggaatggaatggaatggaggggagtgg----agtggag---------ttgagggaaatggagtggagtggaatggag
s Gorilla_beringei.k141_2370269    4979 101 +   6094 aagggagtggaatg---gaatggaa-tggagtagaatggagtggagtggaatggaaaggagtggaaacaatggag---------tgtaatggagtggaatcgagctgcattgaa
i Gorilla_beringei.k141_2370269  I 380 I 441
s Pan_paniscus.KQ412053.1         71597  97 -  73861 aatggaatgcaatg---gaatgcaa-tggaatggaatagaatgggatGGAATCAACACtactgg----aatggaa---------tagaatggaatggagaggactagaatgaaa
i Pan_paniscus.KQ412053.1        C 0 C 0
s Pan_troglodytes.NBAG03000686.1 339471 106 - 341870 agggaagtggaatg---gaatgaaa-tggaacggaatggaatggaatggaatggagtggagtgg----aatggaagcagtggagtagaatggaatggagtggagtggaacagag
i Pan_troglodytes.NBAG03000686.1 C 0 I 520

a score=0.000000
s hg38.chr4_GL000008v2_random     6018 190 + 209709 tggaatggaatggaa-------tggaatg-------gtgaaataaaatgtgagctgagattgtgccactgtgttccagcctTTTTTtgacacagtgagagcccgtcaaaggaaaggaatggaatggaatatggtggaatggaa---------------------------------tggagtggagtggattggag----------tggagtg-----gagtg---------------gagtcaagtgg-----aacggagtggaatggaat
s Gorilla_beringei.k141_748801    2786 170 +   3374 gggaatgcaatggaa-------tggaatg-------gtgaaaagaaatgtgagctgagatcatgccactgcacgccagca--tgggtgacagagtgagaccctgtcaaaataaaggaatggaatggagtgaaat----------ggaatgg------aat-g--g--aa--tggagaggagtggaggggagtggag----------tggaatg-----gagtg---------------g---------------------------------
i Gorilla_beringei.k141_748801   I 310 n 441
s Pan_paniscus.KQ412053.1        71694 165 -  73861 -ggaatggaatggga-------tgaaATGAACCCGagtaaaatggaat-------------------------------------------------------------ggaatggagtagaatcaacccgagtggaatggaatggaatgga-atggaatgg-aatggaa-tggaatggaatggaatcatcccgag----------tggaatg-----gaatg---------------gaattgaatga-----aatgaaatggaatggaat
i Pan_paniscus.KQ412053.1        C 0 C 0
s Pan_troglodytes.NBAG03000163.1 62201 228 - 223623 ggaaatggaattgaa-------tgcaatg-------gtgaaacgtaatgtgagctgagattatgccactgcacatgagcc--agggtgacagagtcagatcctgtcaaaagaaaggaatggaatgcaaaggaatggaatggaatggaatgga-atggaatgg-aatggaa-tggaatggaatggaatggagtggagtggagtggaatggaatg-----gaatg---------------gaatggagtgg-----agtgcagtggaatggaat
i Pan_troglodytes.NBAG03000163.1 I 595 I 365

a score=0.000000
s hg38.chr4_GL000008v2_random      6208  99 + 209709 agg----------atggaatcgaatggcatgtagtggagtgggatggagtgaatgtcagtggattagggtggaatggagtggaatggaatgggatggaagggaatggc-----a
s Gorilla_beringei.k141_165600     4943  79 +   6442 gga----------gtggaatggaatggagtggagtggagtggaatggaatg---------------gaagggagtggtgtggaatggaatggaat-----ggaaagaa-----a
i Gorilla_beringei.k141_165600   I 253 I 112
s Pan_paniscus.KQ412053.1         71859  88 -  73861 gga----------atcaacgcga-----gTGAAacggtatggaatggaatggaatggaatggaatagaatcaacccgagtggaatg------aaTGGAACgagatgga-----a
i Pan_paniscus.KQ412053.1        C 0 C 0
s Pan_troglodytes.NBAG03000771.1 174083 104 + 210065 ggg----------agGGAATGGAATGTCATGTAGTGGAGTAGGGTGGAGTGAATTTGAGTAGAGTAgggtagaatggagtggaatgaagtggaatggaatgggatggaagggga
i Pan_troglodytes.NBAG03000771.1 I 997 C 0

a score=0.000000
s hg38.chr4_GL000008v2_random      6307 10 + 209709 tggagtgtag
s Pan_paniscus.KQ412053.1         71947 10 -  73861 tggaatggaa
i Pan_paniscus.KQ412053.1        C 0 C 0
s Pan_troglodytes.NBAG03000771.1 174187 10 + 210065 tggcatggag
i Pan_troglodytes.NBAG03000771.1 C 0 C 0
e Gorilla_beringei.k141_165600     5022 112 +   6442 I

a score=0.000000
s hg38.chr4_GL000008v2_random      6317 22 + 209709 tggagtggactggagtgggtta
s Gorilla_beringei.k141_3239499    8607 22 -  15222 cgaagtggaaaggaatggaatg
i Gorilla_beringei.k141_3239499  I 740 I 55
s Pan_paniscus.KQ412053.1         71957 22 -  73861 tggaattacaTAAACCctagtg
i Pan_paniscus.KQ412053.1        C 0 I 50
s Pan_troglodytes.NBAG03000771.1 174197 22 + 210065 tggagtggaatggagtggattg
i Pan_troglodytes.NBAG03000771.1 C 0 I 888

a score=0.000000
s hg38.chr4_GL000008v2_random      6339 35 + 209709 ga---at--ggaattgaatggaatggtat-------------------------ggaatggaatg
s Gorilla_beringei.k141_3239499    8684 35 -  15222 ga---gt--gcaggggaatggaatggaat-------------------------ggaatggaatg
i Gorilla_beringei.k141_3239499  I 55 I 5347
s Pan_paniscus.KQ412053.1         72029 33 -  73861 ga---at--ggaatgcaatggaatggaat-------------------------ggaatggaa--
i Pan_paniscus.KQ412053.1        I 50 C 0
s Pan_troglodytes.NBAG03000105.1 142548 35 - 189131 ga---at--ggaatggaatggaatggaat-------------------------agaatggaatg
i Pan_troglodytes.NBAG03000105.1 I 734 I 138

a score=0.000000
s hg38.chr4_GL000008v2_random     6374 26 + 209709 ga----atgcaatgcaatggaatggaatgg
s Gorilla_beringei.k141_165600    5134 26 +   6442 ta----attgaacggaatggaatggaatgg
i Gorilla_beringei.k141_165600   I 112 C 0
s Pan_paniscus.KQ412053.1        72062  9 -  73861 --------aaacccgag-------------
i Pan_paniscus.KQ412053.1        C 0 C 0
s Pan_troglodytes.NBAG03003562.1  7510 26 +  18198 ga----atggaatgcagtggaatggaatgg
i Pan_troglodytes.NBAG03003562.1 I 734 C 0

a score=0.000000
s hg38.chr4_GL000008v2_random     6400 67 + 209709 tgaaattgaatgtgagctgagatag-tgccactccactccagcctgggtgacagattgatatcctgt-c
s Gorilla_beringei.k141_317772    1344 54 +   1616 -------------GAGTTGAGATTG-TGCCACTGTACTCCATCTTGGGTaacagagtgagatgctgt-t
i Gorilla_beringei.k141_317772   I 833 I 6
s Pan_troglodytes.NBAG03003562.1  7536 67 +  18198 tgaaattgaatgtgagctgagatag-tgccactccactccagcctgggtgacagattgagatcctgt-c
i Pan_troglodytes.NBAG03003562.1 C 0 C 0
e Pan_paniscus.KQ412053.1        72071  0 -  73861 C

a score=0.000000
s hg38.chr4_GL000008v2_random     6467 6 + 209709 aaaaga
s Gorilla_beringei.k141_165600    5160 6 +   6442 aaagga
i Gorilla_beringei.k141_165600   C 0 I 104
s Pan_troglodytes.NBAG03003562.1  7603 6 +  18198 aaaaga
i Pan_troglodytes.NBAG03003562.1 C 0 I 817
e Pan_paniscus.KQ412053.1        72071 0 -  73861 C

a score=0.000000
s hg38.chr4_GL000008v2_random     6473 54 + 209709 aatgaatggaat--------------------tgaatgga-ggggaatggaatggga-------------------------tggagtggggtgg------------------------------agtgg
s Gorilla_beringei.k141_317772    1404 48 +   1616 aaacaatggaat--------------------ggaatgga-gtggaatggaatggaa-------------------------tggaatggagtg------------------------------------
i Gorilla_beringei.k141_317772   I 6 C 0
s Pan_paniscus.KQ412053.1        72071 53 -  73861 -gggaatggaat--------------------ggagtgaa-atggaatggaatggaa-------------------------tagatttGAATGG------------------------------AAAAA
i Pan_paniscus.KQ412053.1        C 0 C 0
s Pan_troglodytes.NBAG03000163.1 62794 77 - 223623 -------ggaat--------------------ggaatgga-atggaatggaatggaa-------------------------tggaatggagtggagtggagaggagtggagtggagtggactacaatgg
i Pan_troglodytes.NBAG03000163.1 I 365 n 817

a score=0.000000
s hg38.chr4_GL000008v2_random      6527 30 + 209709 agtggagtggaggggactggatttgagtgg
s Gorilla_beringei.k141_317772     1452 26 +   1616 ----gaatggaatggaatggaatggagtgg
i Gorilla_beringei.k141_317772   C 0 I 28
s Pan_paniscus.KQ412053.1         72124 23 -  73861 ACCTgactgcaatggaatggaat-------
i Pan_paniscus.KQ412053.1        C 0 C 0
s Pan_troglodytes.NBAG03000950.1 127958 30 - 135145 aatggaatggaatggattccaattgaatga
i Pan_troglodytes.NBAG03000950.1 I 38017 C 0

a score=0.000000
s hg38.chr4_GL000008v2_random      6557 30 + 209709 agtctagtggaacagagtggaatg--------------------gaatgg
s Gorilla_beringei.k141_2370269    5521 30 +   6094 agtggaatggaatggaatggattg--------------------gaaggg
i Gorilla_beringei.k141_2370269  I 441 C 0
s Pan_troglodytes.NBAG03000950.1 127988 50 - 135145 aatgaaatggaatggaatggaatgaaaagggttggtatggaatggaatgg
i Pan_troglodytes.NBAG03000950.1 C 0 T 8353
e Pan_paniscus.KQ412053.1         72147  0 -  73861 C

a score=0.000000
s hg38.chr4_GL000008v2_random      6587  7 + 209709 ggt-----ggag
s Gorilla_beringei.k141_2370269    5551  7 +   6094 agt-----ggag
i Gorilla_beringei.k141_2370269  C 0 I 20
s Pan_troglodytes.NBAG03000105.1 142721 10 - 189131 --tcaacgagaa
i Pan_troglodytes.NBAG03000105.1 I 138 I 161
e Pan_paniscus.KQ412053.1         72147  0 -  73861 C

a score=0.000000
s hg38.chr4_GL000008v2_random      6594 15 + 209709 tg-g---aacggaatggaa
s Gorilla_beringei.k141_165600     5270 12 +   6442 tg-a---aatggaatg---
i Gorilla_beringei.k141_165600   I 104 I 222
s Pan_paniscus.KQ412053.1         72147  4 -  73861 ---------------ggaa
i Pan_paniscus.KQ412053.1        C 0 C 0
s Pan_troglodytes.NBAG03000686.1 340097 18 - 341870 tg-gtgaaatgaaatgtga
i Pan_troglodytes.NBAG03000686.1 I 520 I 139

a score=0.000000
s hg38.chr4_GL000008v2_random      6609 5 + 209709 tggag
s Gorilla_beringei.k141_1044046    1045 5 +   1361 TGAGC
i Gorilla_beringei.k141_1044046  I 288 n 222
s Pan_paniscus.KQ412053.1         72151 5 -  73861 tgcaa
i Pan_paniscus.KQ412053.1        C 0 I 3
s Pan_troglodytes.NBAG03000950.1 119685 5 - 135145 tgaag
i Pan_troglodytes.NBAG03000950.1 T 8353 I 3934

a score=0.000000
s hg38.chr4_GL000008v2_random      6614 51 + 209709 aggagtggtg----tg------gagtggagt-----------ggattggaattcaat----g---------------gga---tggaatggtat
s Gorilla_beringei.k141_2370269    5578 42 +   6094 tgcagtggaa----tg------gaatgcaat---gga---aaggagtgaagtggagt----g--------------------------------
i Gorilla_beringei.k141_2370269  I 20 I 367
s Pan_paniscus.KQ412053.1         72159 18 -  73861 ------------------------------------------------------aat----g---------------gaa---tggaatggaat
i Pan_paniscus.KQ412053.1        I 3 C 0
s Pan_troglodytes.NBAG03000950.1 123624 74 - 135145 tggaatggaa----tgggatg-gaatggaat---gga---atggagtggagtggact----ggagtgcactggaggctag---tggagtgga--
i Pan_troglodytes.NBAG03000950.1 I 3934 I 2

a score=0.000000
s hg38.chr4_GL000008v2_random      6665 44 + 209709 ggagtggagtgca-------------gtggaatggaatggaatggaatggaat------------------------------ggaa
s Gorilla_beringei.k141_317772     1506 64 +   1616 ggaacggaacggaatggaggg-g--agtggagtggaatggaggggaatggaatg---tg-at-g-aa--------------atggaa
i Gorilla_beringei.k141_317772   I 28 C 0
s Pan_paniscus.KQ412053.1         72177 64 -  73861 ggaatggaatggaatggaatg-g--aatggaatggaatggaatggaatcaacacgagtgga----a----------------tggaa
i Pan_paniscus.KQ412053.1        C 0 C 0
s Pan_troglodytes.NBAG03000950.1 123700 84 - 135145 gaagtggaatggaatggaacg-g--agtgtaatgaagtggagtggactggagtggagtggattgcaaTGGAGTCAAGTAGAGTgaca
i Pan_troglodytes.NBAG03000950.1 I 2 I 125

a score=0.000000
s hg38.chr4_GL000008v2_random      6709 46 + 209709 tggaatggaatggagaggagaggaatggagtggaatgt-----agtgtaat
s Gorilla_beringei.k141_317772     1570 44 +   1616 tggaatggagtggagtagagtggattggagtggagtgg-----agtaga--
i Gorilla_beringei.k141_317772   C 0 n 0
s Pan_paniscus.KQ412053.1         72241 46 -  73861 tagaaaggaatggagaggaatagaatggaatggaatgg-----aaaggaat
i Pan_paniscus.KQ412053.1        C 0 C 0
s Pan_troglodytes.NBAG03000686.1 340254 51 - 341870 tggaatggagtggagtggaatggagtggagtggaatggtgtggagtggaat
i Pan_troglodytes.NBAG03000686.1 I 139 I 217

a score=0.000000
s hg38.chr4_GL000008v2_random      6755  78 + 209709 tggaa-----------aggat-----ggaatggaatggaatgccatggaatagaatt-------------------------aggaatagaatggaatgatgtggaatggaatggagta
s Gorilla_beringei.k141_165600     5504 101 +   6442 tggaa-----------ggaat-----ggagtggaatggagtggagtggagtggaatg-cagtggagtggaatg-gaatggagtggagcagagtggaatggagtggaatggaatggaatg
i Gorilla_beringei.k141_165600   I 222 C 0
s Pan_paniscus.KQ412053.1         72287  76 -  73861 ggaat-----------caacc-----cgagtggaatggaatggaatggaatggaa---------------------------aggagtggaatggaatggagtagaatcaagcggagtg
i Pan_paniscus.KQ412053.1        C 0 C 0
s Pan_troglodytes.NBAG03000105.1 142892  75 - 189131 ggaat-----------ca-ac-----caagtggaatggaatggaatggaatggaa---------------------------gggaagggaatggagtggaatggaatggaatggaatg
i Pan_troglodytes.NBAG03000105.1 I 161 I 119

a score=0.000000
s hg38.chr4_GL000008v2_random     6833 103 + 209709 gaatt------cagtggagt-----ggagtggagtggagtggaa---tgtaatg----------taa--tggaatgggatgggatggagt-------------------ggaatggaatgga--gtggagtggagtggagtgga------atggag
s Gorilla_beringei.k141_165600    5605 113 +   6442 gagaa------gaacgaagaagaatggagtggaatgtaatggag---tggagtg----------gag--tggattggagtggagtggcgt-------------------ggacaggagtgga--atggagtgaaatggagtggagtgga-ctggag
i Gorilla_beringei.k141_165600   C 0 C 0
s Pan_paniscus.KQ412053.1        72363 127 -  73861 gaatc------gaatggaat-----ggaaaggaatggaatggaa---tggaatg----------gaa--tggaatggaatggaatggaatcaacctgattGCCatgaatggaagggaatgga--atggaatacaatcaACCCGAGtgaa-atggat
i Pan_paniscus.KQ412053.1        C 0 C 0
s Pan_troglodytes.NBAG03003287.1 19617 113 +  22681 gaatt------cagtggagt-----ggagtggagtggagtggag---tggaatgtaatggaatggaa--tggaatgggatgggatggagt-------------------ggaatggaatgga--gtggagtgga-----gtggagcgga-atggag
i Pan_troglodytes.NBAG03003287.1 I 2186 I 407

a score=0.000000
s hg38.chr4_GL000008v2_random      6936 28 + 209709 tggaatggaatgggatgggatggaatgg
s Gorilla_beringei.k141_165600     5718 28 +   6442 tggagtggaatgcaatggagtggaatgg
i Gorilla_beringei.k141_165600   C 0 I 138
s Pan_paniscus.KQ412053.1         72490 28 -  73861 tggaatggaagggaatgcaATCAAGCCG
i Pan_paniscus.KQ412053.1        C 0 C 0
s Pan_troglodytes.NBAG03000105.1 143086 28 - 189131 tgcaatggaatggaatggaatggaacgg
i Pan_troglodytes.NBAG03000105.1 I 119 I 228

a score=0.000000
s hg38.chr4_GL000008v2_random      6964 57 + 209709 a--------------------gtggagtggagt-----tgagtggat-----tggaatcgaatggaatggagtggagaggagtgtag
s Gorilla_beringei.k141_165600     5884 67 +   6442 a--------------------gtggaatggagtggagtggagaggattgcagtggagttgagtgaaatggagtggaattgagtggag
i Gorilla_beringei.k141_165600   I 138 I 35
s Pan_paniscus.KQ412053.1         72518 51 -  73861 A--------------------CTCGA-----------ATGAAAGGAA-----TGAgatgaaatggaatgcaatggaatggaatgtaa
i Pan_paniscus.KQ412053.1        C 0 I 35
s Pan_troglodytes.NBAG03000686.1 340522 82 - 341870 agtggagaggagtggagtggcatggagtggagtggatttgaaTAGAG-----TGGATcgcagtgcagtggaatggaacagaatggaa
i Pan_troglodytes.NBAG03000686.1 I 217 I 383

a score=0.000000
s hg38.chr4_GL000008v2_random     7021 41 + 209709 tggaatg---------------gaatggaatg-----gaatggaatagaa-----gggaatagaat
s Gorilla_beringei.k141_165600    5986 40 +   6442 tggaatggaacggagtggaaccgaatggaatg-----gaacagaa---------------------
i Gorilla_beringei.k141_165600   I 35 I 71
s Pan_paniscus.KQ412053.1        72604 41 -  73861 tggaatg---------------gaatggattg-----aaatggaatgtaa-----tggaaaggaat
i Pan_paniscus.KQ412053.1        I 35 I 2
s Pan_troglodytes.NBAG03004682.1  1165 46 +   3314 tggaatg---------------gaatggaatg-----gaatggaatggaatagaagggaatagaat
i Pan_troglodytes.NBAG03004682.1 I 389 n 383

a score=0.000000
s hg38.chr4_GL000008v2_random      7062 69 + 209709 ggtgaaatgaaatgtgagctgcgattgtgCCACTGCACTCCATCCCGGGTGACAG-gtgagattctatcg
s Gorilla_beringei.k141_165600     6097 70 +   6442 ggtgaaatgaaatgtgagctaagattgtgccactgcactccagtatgtgtgacagagtgagaacaagttg
i Gorilla_beringei.k141_165600   I 71 I 67
s Pan_paniscus.KQ412053.1         72647  8 -  73861 -----aatggaat---------------------------------------------------------
i Pan_paniscus.KQ412053.1        I 2 C 0
s Pan_troglodytes.NBAG03000771.1 175107 69 + 210065 ggtgaaatgaaatgtgagctgagattgtgccactgcactccatcctgggtgacag-gtgagattctatcg
i Pan_troglodytes.NBAG03000771.1 I 888 I 183

a score=0.000000
s hg38.chr4_GL000008v2_random      7131 72 + 209709 aaagaaa-ggaatggaacggattagagtggaatggaatggagtggggtagagtgg----------agtgga-----------gtggagtggagt
s Gorilla_beringei.k141_2465350    7691 65 +  10038 --------ggaatggaatggaatggaatggaatggaatgcagtggagtgaagtgg----------agtgga-----------gtggaattgagt
i Gorilla_beringei.k141_2465350  I 16 n 67
s Pan_paniscus.KQ412053.1         72655 45 -  73861 -------------ggaatcaatgcGAGTGAaacagaatggaattgaatggaatgg----------aat--------------------------
i Pan_paniscus.KQ412053.1        C 0 C 0
s Pan_troglodytes.NBAG03000950.1 123909 72 - 135145 aaagaaa-ggaatgtaatgtaatggagtgtattcgaatggaatggagtggagtag----------agtgga-----------gtggaatggagt
i Pan_troglodytes.NBAG03000950.1 I 125 I 106

a score=0.000000
s hg38.chr4_GL000008v2_random     7203 15 + 209709 agagtggaataaaga
s Pan_paniscus.KQ412053.1        72700 10 -  73861 -----gaaatggaat
i Pan_paniscus.KQ412053.1        C 0 C 0
s Pan_troglodytes.NBAG03003562.1  8426 15 +  18198 agagtggaataaaga
i Pan_troglodytes.NBAG03003562.1 I 817 I 338
e Gorilla_beringei.k141_2465350   7756 67 +  10038 I

a score=0.000000
s hg38.chr4_GL000008v2_random      7218  66 + 209709 ggaatgg--aatg------ggat-----gtaatggaaagg-----------aatg----cagtgga------------gtg-----gagtagagtggagtgga-------g-------------------------------------tggagtg
s Gorilla_beringei.k141_165600     6234  91 +   6442 ggaatga--aatg------gaat-----ggagtggaatgg-----------agtg----gagtgga------------atg-----gagtggagtggaataga-------gtgga-at-g-a-a---a-tg-gaa-tggag-tggaa-tggagtg
i Gorilla_beringei.k141_165600   I 67 I 69
s Pan_paniscus.KQ412053.1         72710  36 -  73861 ggaaagg--aat-caacccgagg-----ggaatggaatgg-----------aatg----------------------------------------------------------------------------------------------------
i Pan_paniscus.KQ412053.1        C 0 I 36
s Pan_troglodytes.NBAG03000105.1 143342 105 - 189131 ggaatgg--aat-caacccgagt-----ggaatggaatgg-----------aatggagacaaTGGA------------ATTAACGCgagtgaaacagaatgga-------at-------gga-atggaatg-gaa-tggaa-tggaa-tggaatc
i Pan_troglodytes.NBAG03000105.1 I 228 I 63

a score=0.000000
s hg38.chr4_GL000008v2_random      7284 55 + 209709 gtg-----tggagtggagtggagtggaatggaatggaat---ggaatggaatggaatggaatg
s Gorilla_beringei.k141_165600     6394 48 +   6442 gag-----tggaatggagtggagtggagtcgaatggagt---ggagtggagtTTAA-------
i Gorilla_beringei.k141_165600   I 69 n 69
s Pan_paniscus.AJFE02005303.1         0 37 +   1263 -----------------------tggaatggaatggaat---ggaatggaatggaatggaatg
i Pan_paniscus.AJFE02005303.1    n 36 I 5
s Pan_troglodytes.NBAG03000950.1 124087 55 - 135145 gag-----tggagtggagtggaatttaatggatttgagt---gaagtggaatggaatggaatg
i Pan_troglodytes.NBAG03000950.1 I 106 I 44

a score=0.000000
s hg38.chr4_GL000008v2_random      7339 4 + 209709 gcac
s Pan_paniscus.AJFE02005303.1        42 4 +   1263 gcac
i Pan_paniscus.AJFE02005303.1    I 5 C 0
s Pan_troglodytes.NBAG03000771.1 175359 4 + 210065 gcac
i Pan_troglodytes.NBAG03000771.1 I 183 I 1297
e Gorilla_beringei.k141_165600     6442 69 +   6442 I

a score=0.000000
s hg38.chr4_GL000008v2_random     7343 5 + 209709 ggtga
s Pan_paniscus.AJFE02005303.1       46 5 +   1263 gTTGA
i Pan_paniscus.AJFE02005303.1    C 0 C 0
s Pan_troglodytes.NBAG03003287.1 20137 5 +  22681 ggtga
i Pan_troglodytes.NBAG03003287.1 I 407 n 1297
e Gorilla_beringei.k141_165600    6442 69 +   6442 I

a score=0.000000
s hg38.chr4_GL000008v2_random      7348 39 + 209709 aatgaaatgtgggctgagattgtgccacttcactacagc
s Gorilla_beringei.k141_3656        523 27 -   8983 ------------gctgaaattgtgccactgcactgcagc
i Gorilla_beringei.k141_3656     n 69 C 0
s Pan_paniscus.AJFE02005303.1        51 31 +   1263 AATGAAatgtgggctgagattgtgccacttc--------
i Pan_paniscus.AJFE02005303.1    C 0 I 256
s Pan_troglodytes.NBAG03000950.1 124186 39 - 135145 aatgaaatgtgagctgagattgtgccactgctctccagc
i Pan_troglodytes.NBAG03000950.1 I 44 I 4416

a score=0.000000
s hg38.chr4_GL000008v2_random      7387 38 + 209709 ctgggtgacggagtgagttcctgaagaaataaaagaat
s Gorilla_beringei.k141_3656        550 23 -   8983 ctgggtgacagagtgagatcctg---------------
i Gorilla_beringei.k141_3656     C 0 n 0
s Pan_troglodytes.NBAG03000950.1 128641 23 - 135145 ctgtgtgacagagtgagatccta---------------
i Pan_troglodytes.NBAG03000950.1 I 4416 C 0
e Pan_paniscus.AJFE02005303.1        82 256 +   1263 I

a score=0.000000
s hg38.chr4_GL000008v2_random      7425 69 + 209709 gtaatagaatggattggaatg------a---------aatggaatgga---------------gtgtagtggactagagt-agagtggaatgaggt----ggag
s Gorilla_beringei.k141_3239499   14066 84 -  15222 tggaatggaatggaatggaatggagcgg---------aatgcaatggaatggaatggagt---g--gagtggaatgaaa-tggaatgtaatggagt----gga-
i Gorilla_beringei.k141_3239499  I 5347 I 453
s Pan_paniscus.KQ412053.1         72782 12 -  73861 ----------------------------------------------------------------------------------------aatgcaat----aaac
i Pan_paniscus.KQ412053.1        I 36 C 0
s Pan_troglodytes.NBAG03000950.1 128664 79 - 135145 tttaaagaaaggaatggaata------c---------aatgaagtgga-g--tg-g-aatggaaaggaattgaatggagt-tgagtggagtggaat----ggaa
i Pan_troglodytes.NBAG03000950.1 C 0 n 0

a score=0.000000
s hg38.chr4_GL000008v2_random      7494 14 + 209709 tagagtggaag------gga
s Gorilla_beringei.k141_3239499   14603  9 -  15222 --gaatggaat---------
i Gorilla_beringei.k141_3239499  I 453 n 453
s Pan_paniscus.KQ412053.1         72794 14 -  73861 acgaatgcaat------gga
i Pan_paniscus.KQ412053.1        C 0 C 0
s Pan_troglodytes.NBAG03000105.1 143510 14 - 189131 ctgagtggaat------gga
i Pan_troglodytes.NBAG03000105.1 I 63 C 0

a score=0.000000
s hg38.chr4_GL000008v2_random      7508 34 + 209709 atggaat---gaaatga----gatggaatggaatggaat-gt
s Gorilla_beringei.k141_2370269    5987 37 +   6094 atggaatcatggaatgc----agtgcagtggaatggaat-tt
i Gorilla_beringei.k141_2370269  I 367 C 0
s Pan_paniscus.KQ412053.1         72808 34 -  73861 atggaat---ggaatgg----aatggaatggaatggaat-gg
i Pan_paniscus.KQ412053.1        C 0 I 9
s Pan_troglodytes.NBAG03000105.1 143524 34 - 189131 atgcaat---gaaatgg----aatgcaatggaattgaat-gg
i Pan_troglodytes.NBAG03000105.1 C 0 n 0

a score=0.000000
s hg38.chr4_GL000008v2_random      7542 21 + 209709 aatagaatg-------------gaatgaagtgga
s Gorilla_beringei.k141_2370269    6024 31 +   6094 catggaatggag-tg--gagtggagtgaaattga
i Gorilla_beringei.k141_2370269  C 0 N 0
s Pan_paniscus.KQ412053.1         72851 12 -  73861 ----------------------aacgtgagtgga
i Pan_paniscus.KQ412053.1        I 9 n 9
s Pan_troglodytes.NBAG03000686.1 340987 26 - 341870 aacggattggag-tg--gagtggagttga-----
i Pan_troglodytes.NBAG03000686.1 I 383 n 0

a score=0.000000
s hg38.chr4_GL000008v2_random    7563 42 + 209709 gtggagtggagtgca---------aaaatcctcaataaaatgctagcaaac
s Pan_paniscus.AJFE02005303.1     338 29 +   1263 -------------ca---------aaaatcctcaataaaatactagcatac
i Pan_paniscus.AJFE02005303.1    I 256 C 0
s Pan_troglodytes.NBAG03003562.1 8779 29 +  18198 -------------ca---------aaaatcctcaataaaatactagcaaac
i Pan_troglodytes.NBAG03003562.1 I 338 I 447

a score=0.000000
s hg38.chr4_GL000008v2_random             7605 23 +    209709 cgaatcca---gcagcaaat------caaaaa
s Gorilla_beringei.k141_111300             997 23 -     14630 tgaatcca---gcagcacat------caaaaa
i Gorilla_beringei.k141_111300       N 0 C 0
s Gorilla_gorilla.LT578340.1         119648095 23 - 195582420 tgaatcca---gcagcacat------caaaaa
i Gorilla_gorilla.LT578340.1         N 0 C 0
s Hoolock_leuconedys.ctg2405                11031 23 -     15084 tgaatcca---gcagcacat------caaaaa
i Hoolock_leuconedys.ctg2405            N 0 C 0
s Nomascus_concolor.k141_463898           1318 23 +      1817 tgaatcca---gca------gcacatcaaaaa
i Nomascus_concolor.k141_463898      N 0 I 3
s Nomascus_gabriellae.k141_1350167         267 20 +      9928 taaatcca---ac--cttat------caata-
i Nomascus_gabriellae.k141_1350167   N 0 I 106
s Pan_paniscus.AJFE02005303.1              367 23 +      1263 cgaatcca---gcagcaaat------caaaaa
i Pan_paniscus.AJFE02005303.1        C 0 I 497
s Pan_troglodytes.KZ622853.1            258051 23 +    258671 cgaatcca---gcagcaaat------caaaaa
i Pan_troglodytes.KZ622853.1         I 367 I 370
s Pongo_abelii.NDHI03003816.1           182891 23 -    373494 tgaatcca---gcagcacat------caaaaa
i Pongo_abelii.NDHI03003816.1        N 0 C 0
s Pongo_pygmaeus.ctg62                19802792 23 +  19899266 tgaatcca---gcagcacat------caaaaa
i Pongo_pygmaeus.ctg62               N 0 C 0
s Symphalangus_syndactylus.tarseq_24  13897616 23 +  13920577 tgaatcca---gcagcacat------caaaaa
i Symphalangus_syndactylus.tarseq_24 N 0 I 280

a score=0.000000
s hg38.chr4_GL000008v2_random             7628 277 +    209709 gcttatccacc-ataatcaaatgggtttcatccctgggatgcaaggctggtacaacatacgcaaat----cagtaaacgtaatc-catcatataaacagaaccaacgtcaaaaaccac--gattatctcaatagatgcaga-aaagccctttgacaaaattcaacaac-c-ttcatgctaaaaactctcaataaattagatattgatgggacgtatctcaaaatattaagagctattta-----tgacaaacccacagccaatagcatact-gaatgggcaa----aacctgaaagca
s Gorilla_beringei.k141_111300            1020 278 -     14630 gcttatccacc-gtgatctagtgggcttcatccctgggatgcaaggctggttcaacatacgcaaat----caataaacgtaacc-cagtatacaaatagaacaaaagacaaaaaccacatgattatctcaatagatgcaga-aaaggcctttgacaaaattcaacaac-c-ttcatgctaaaaactctcaataaattaggtattga-gggacatatcccaaaataataagagctattta-----tgacaaacccacagccaatatcatact-gaatgggcaa----aaactggaagca
i Gorilla_beringei.k141_111300       C 0 C 0
s Gorilla_gorilla.LT578340.1         119648118 278 - 195582420 gcttatccacc-gtgatctagtgggcttcatccctgggatgcaaggctggttcaacatacgcaaat----caataaacgtaacc-cagtatacaaatagaacaaaagacaaaaaccacatgattatctcaatagatgcaga-aaaggcctttgacaaaattcaacaac-c-ttcatgctaaaaactctcaataaattaggtattga-gggacatatcccaaaataataagagctattta-----tgacaaacccacagccaatatcatact-gaatgggcaa----aaactggaagca
i Gorilla_gorilla.LT578340.1         C 0 C 0
s Hoolock_leuconedys.ctg2405                11054 280 -     15084 gcttgtccacc-atgatcaagtgggcttcatccctgggatgcaaggctggttcaacatacacaaat----caataaatgtaatc-cagcatataaacagaaccaacgacaaaaaccatatgattatctcagtagatgcaga-aaaggcctttgacaaaattcaacagc-ccttcatgctaaaaactctcaataaattaggtattgatgggacgtatatcaaaataataagagctatcta-----tgacaaacccacagccaatatcatact-gaatgggcaa----aaactggaagca
i Hoolock_leuconedys.ctg2405            C 0 C 0
s Nomascus_annamensis.k141_745421            0  44 -      4569 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------aagagatgcatgccaaatattat-----ggtatagat----aagctgagagta
i Nomascus_annamensis.k141_745421    N 0 I 305
s Nomascus_concolor.k141_463898           1344 276 +      1817 ---tatcca-ctatgatcaagttggcttcatccctgggatacaaggctggttgaacacacac----aaattgataaatgtaat-ccatcacataaatagaaccaatgacagaaaccacatgattatctcaatagatgcag-aaaaggcctttga-aaaattcaacag-tctttcatgctaaaaactctcaataaactaggtattgatgggacataactgaaaataataagagctattta-----tgacaaacccacagccaatatcatact-gaatgggcaa----aaactggaagca
i Nomascus_concolor.k141_463898      I 3 C 0
s Nomascus_gabriellae.k141_1350167         393  62 +      9928 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------attAATAAAAGT-ACcta-----taagagatgcatgccaaatattat-----ggtataggt----aagctgagagta
i Nomascus_gabriellae.k141_1350167   I 106 I 305
s Nomascus_siki_b.tarseq_80          20339  62 -  18771707 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------gtccaggacctgatggattcaccgccga-attctacc-agaggtacaaggaggagctggtacca
i Nomascus_siki_b.tarseq_80      N 0 C 0
s Pan_paniscus.CM003386.1            127570361 278 - 205426864 gcttatccacc-acgatcaagtgggcttcatccctgggatgcaaggctggttcaacatacgcaaat----caataaacgtaacc-cagtatataaacagaacaaaagacaaaaaccacatgattatctcaatagacgcaga-agaggcctttgacaaaattcaacaac-c-ttcatgctaaaaactctcaataaattaggtattaa-gggatgtatctcaaaataataagagctatcta-----tgacaaacccacagccaatatcatact-gaatgggcaa----aaactggaagca
i Pan_paniscus.CM003386.1            n 497 C 0
s Pan_troglodytes.CM009241.2         120147508 278 - 196562556 gcttatccacc-atgatcaagtgggcttcatccctgggatgcaaggctggttcaacatacgcaaat----caataaacgtaacc-cagtatataaacagaaccaaagacaaaaaccacatgattatctcaatagacgcaga-agaggcctttgacaaaattcaacaac-c-ttcatgctaaaaactctcaataaattaggtattaa-gggatgtatctcaaaataataagagctatcta-----tgacaaacccacagccaatatcatact-gaatgggcaa----aaactggaagca
i Pan_troglodytes.CM009241.2         n 370 C 0
s Pongo_abelii.NDHI03003816.1           182914 279 -    373494 gcttatccacc-atgatcaagtgggcttcatccctgggatgcaaggctggttcaacatatgcaaat----caataaatgtaatc-cagtatataaacagaacaaaagacaaaaaccacatgattatctcagtagatgcaga-aaaggcctttgacaaaattcaagaac-c-ttcatgctaaaaactgtcaataaattaggcattgatgagacgtatctcaaaataataagagctatcta-----tgacaaacccacagccaatatcatatg-gaatgggcaa----aaactggaagca
i Pongo_abelii.NDHI03003816.1        C 0 C 0
s Pongo_pygmaeus.ctg62                19802815 280 +  19899266 gcttatccacc-atgatcaagtgggcttcatccctgggatgcaaggctggttcaacatatgcaaat----caataaatgtaatc-cagtatataaacagaacaaaagacaaaaaccacatgattatctcagtagatgcaga-aaaggcctttgacaaaattcaagaac-c-ttcatgctaaaaactgtcaataaattaggtattgatgagacgtatctcaaaataataagagctatcta-----tgacaaacccacagccaatatcatactggaatgggcaa----aaactggaagca
i Pongo_pygmaeus.ctg62               C 0 C 0
s Symphalangus_syndactylus.tarseq_24     10627 280 -  13920577 gcttatacacc-atgatcaagtgggcttcatccctgggatgcaaggctggttcaacatacacaaat----caataaatgtaatc-cagcatataaacagaaccaacgacaaaaaccatatgattatctcagtagatgcaga-aaaggcctttgacaaaattcaacagc-ccttcatgctaaaaactctcaataaattaggtattgatgggacgtatatcaaaataataagagctatcta-----tgacaaacccacagccaatatcatact-gaatgggcaa----aaactggaagcc
i Symphalangus_syndactylus.tarseq_24 n 280 I 21

a score=0.000000
s hg38.chr4_GL000008v2_random             7905 12 +    209709 ttccct-ttgaa--------------a
s Gorilla_beringei.k141_111300            1298 12 -     14630 ttccct-ttgaa--------------a
i Gorilla_beringei.k141_111300       C 0 C 0
s Gorilla_gorilla.LT578340.1         119648396 12 - 195582420 ttccct-ttgaa--------------a
i Gorilla_gorilla.LT578340.1         C 0 C 0
s Hoolock_leuconedys.ctg2405                11334 12 -     15084 ttccct-ttgaa--------------a
i Hoolock_leuconedys.ctg2405            C 0 C 0
s Nomascus_annamensis.k141_745421          349 12 -      4569 atccct-caaga--------------a
i Nomascus_annamensis.k141_745421    I 305 I 11
s Nomascus_concolor.k141_463898           1620 12 +      1817 ctccct-ttgaa--------------a
i Nomascus_concolor.k141_463898      C 0 C 0
s Nomascus_gabriellae.k141_1350167         760 12 +      9928 atccct-caaga--------------a
i Nomascus_gabriellae.k141_1350167   I 305 I 11
s Nomascus_siki_b.tarseq_80          20401 27 -  18771707 ttccttctgaaactattccaatcgata
i Nomascus_siki_b.tarseq_80      C 0 I 26
s Pan_paniscus.CM003386.1            127570639 12 - 205426864 ttccct-ttgaa--------------a
i Pan_paniscus.CM003386.1            C 0 C 0
s Pan_troglodytes.CM009241.2         120147786 12 - 196562556 ttccct-ttgaa--------------a
i Pan_troglodytes.CM009241.2         C 0 C 0
s Pongo_abelii.NDHI03003816.1           183193 12 -    373494 ttccct-ttgaa--------------a
i Pongo_abelii.NDHI03003816.1        C 0 C 0
s Pongo_pygmaeus.ctg62                19803095 12 +  19899266 ttccct-ttgaa--------------a
i Pongo_pygmaeus.ctg62               C 0 C 0
s Symphalangus_syndactylus.tarseq_24  13897919 12 +  13920577 ttccct-ttgaa--------------a
i Symphalangus_syndactylus.tarseq_24 I 280 C 0

a score=0.000000
s hg38.chr4_GL000008v2_random                            7917  9 +    209709 atct-C---A-------GTT
s Acomys_cahirinus.AcoCah_scaffold_1625                108330  8 -    189883 C--AGG---A-------GCC
i Acomys_cahirinus.AcoCah_scaffold_1625             N 0 C 0
s Allenopithecus_nigroviridis.k141_3103707              58940  9 +     61638 atct-c---a-------gta
i Allenopithecus_nigroviridis.k141_3103707          N 0 C 0
s Allochrocebus_lhoesti.k141_4825038                    50748  9 +     53391 atct-c---a-------gta
i Allochrocebus_lhoesti.k141_4825038                N 0 C 0
s Allochrocebus_preussi.k141_1202907                     1472  9 +     72529 atct-c---a-------gta
i Allochrocebus_preussi.k141_1202907                N 0 C 0
s Allochrocebus_solatus.k141_787528                      1049  9 +      3797 atct-c---a-------gta
i Allochrocebus_solatus.k141_787528                 N 0 C 0
s Alouatta_belzebul.k141_1818029                         6129 13 -     18050 actt-c---act-ta--att
i Alouatta_belzebul.k141_1818029                    N 0 C 0
s Alouatta_caraya.k141_5460                              7246 13 -     11521 acct-c---act-ta--att
i Alouatta_caraya.k141_5460                         N 0 C 0
s Alouatta_discolor.k141_811576                          6804 13 -     21359 actt-c---act-ta--att
i Alouatta_discolor.k141_811576                     N 0 C 0
s Alouatta_juara.k141_1856473                            5187 13 +      7227 actt-c---act-ta--att
i Alouatta_juara.k141_1856473                       N 0 C 0
s Alouatta_macconnelli.k141_1331706                      6102 13 -     10438 actt-c---act-ta--att
i Alouatta_macconnelli.k141_1331706                 N 0 C 0
s Alouatta_nigerrima.k141_2718643                        2756 13 +      7047 actt-c---act-ta--att
i Alouatta_nigerrima.k141_2718643                   N 0 C 0
s Alouatta_palliata.k141_1316127                         6040 13 +     10410 acct-c---act-ta--att
i Alouatta_palliata.k141_1316127                    N 0 C 0
s Alouatta_puruensis.k141_390786                         7317 13 -      7615 actt-c---act-ta--att
i Alouatta_puruensis.k141_390786                    N 0 C 0
s Alouatta_seniculus.k141_990213                         2761 13 +      6429 actt-c---act-ta--att
i Alouatta_seniculus.k141_990213                    N 0 C 0
s Aotus_azarae.k141_3170768                             58444 13 +     78111 atct-c---act-ta--gtt
i Aotus_azarae.k141_3170768                         N 0 C 0
s Aotus_griseimembra.k141_3275623                        1375 13 +     22701 atct-c---act-ta--gtt
i Aotus_griseimembra.k141_3275623                   N 0 C 0
s Aotus_nancymaae.KZ196176.1                          5745335 13 +   9889416 atct-c---act-tA--GTT
i Aotus_nancymaae.KZ196176.1                        N 0 C 0
s Aotus_trivirgatus.k141_1740727                         1927 13 -    104377 atct-c---act-ta--gtt
i Aotus_trivirgatus.k141_1740727                    N 0 C 0
s Aotus_vociferans.k141_718647                           1927 13 +     23246 atct-c---act-ta--gtt
i Aotus_vociferans.k141_718647                      N 0 C 0
s Arctocebus_calabarensis.k141_1161114                  14233 13 +     17483 atct-c---a-tata--gtt
i Arctocebus_calabarensis.k141_1161114              N 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                         9535188 13 +  39197703 acct-c---act-ta--att
i Ateles_geoffroyi_b.tarseq_2582                       N 0 C 0
s Ateles_belzebuth.k141_1348307                         56476 13 +     85812 acct-c---act-ta--att
i Ateles_belzebuth.k141_1348307                     N 0 C 0
s Ateles_chamek.k141_1072810                             7473 13 +     89302 acct-c---act-ta--att
i Ateles_chamek.k141_1072810                        N 0 C 0
s Ateles_geoffroyi_a.k141_1300742                         11982 13 -     58268 acct-c---act-ta--att
i Ateles_geoffroyi_a.k141_1300742                     N 0 C 0
s Ateles_marginatus.k141_899112                         59970 13 +    119057 acct-c---act-ta--att
i Ateles_marginatus.k141_899112                     N 0 C 0
s Ateles_paniscus.k141_1631200                           1921 13 -     25888 acct-c---act-ta--att
i Ateles_paniscus.k141_1631200                      N 0 C 0
s Avahi_laniger.k141_2840928                             2801  9 -     16375 atct-c---a-------gtt
i Avahi_laniger.k141_2840928                        N 0 C 0
s Avahi_peyrierasi.k141_767228                           8771  9 -      9688 atct-c---a-------gtt
i Avahi_peyrierasi.k141_767228                      N 0 C 0
s Cacajao_ayresi.k141_724503                           109845 13 -    171031 atct-c---act-ta--att
i Cacajao_ayresi.k141_724503                        N 0 C 0
s Cacajao_calvus.k141_96166                              8871 13 +    125063 atct-c---act-ta--att
i Cacajao_calvus.k141_96166                         N 0 C 0
s Cacajao_hosomi.k141_303789                            10919 13 -    216513 atct-c---act-ta--att
i Cacajao_hosomi.k141_303789                        N 0 C 0
s Cacajao_melanocephalus.k141_1160263                    3458 13 -    134917 atct-c---act-ta--att
i Cacajao_melanocephalus.k141_1160263               N 0 C 0
s Capromys_pilorides.CapPil_scaffold_647363               236  9 +      1887 caca-t---a-------gtt
i Capromys_pilorides.CapPil_scaffold_647363         N 0 I 3
s Carlito_syrichta.NW_007248099.1                      305229 13 +    345090 attt-c---ACA-TA--GTT
i Carlito_syrichta.NW_007248099.1                   N 0 C 0
s Castor_canadensis.CasCan_scaffold_47037               26791  9 +     33760 caca-t---a-------gtt
i Castor_canadensis.CasCan_scaffold_47037           N 0 C 0
s Cavia_aperea.AVPZ01000278.1                        15783532  9 -  24422027 cata-t---a-------gtt
i Cavia_aperea.AVPZ01000278.1                       N 0 C 0
s Cavia_porcellus.DS562889.1                         15795466  9 -  24440124 caca-t---a-------gtt
i Cavia_porcellus.DS562889.1                        N 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                   173657  9 +    436027 caca-t---a-------gtt
i Cavia_tschudii.CavTsc_scaffold_488                N 0 C 0
s Cebus_albifrons.Contig22                           18886656 13 -  29618158 atct-c---act-tt--att
i Cebus_albifrons.Contig22                          N 0 C 0
s Cebus_olivaceus.k141_93739                             4202 13 -     26817 atct-c---act-tt--att
i Cebus_olivaceus.k141_93739                        N 0 C 0
s Cebus_unicolor.k141_239009                             8442 13 +     25043 atct-c---act-tt--att
i Cebus_unicolor.k141_239009                        N 0 C 0
s Cephalopachus_bancanus.k141_702587                     4266 13 +     21754 attt-c---aca-ta--gtt
i Cephalopachus_bancanus.k141_702587                N 0 C 0
s Cercocebus_atys.KQ010443.1                          6550738  9 +   6739814 atct-c---a-------gta
i Cercocebus_atys.KQ010443.1                        N 0 C 0
s Cercocebus_chrysogaster.k141_2951608                  52215  9 -     54931 atct-c---a-------gta
i Cercocebus_chrysogaster.k141_2951608              N 0 C 0
s Cercocebus_lunulatus.k141_3387186                     17199  9 -     19697 atct-c---a-------gta
i Cercocebus_lunulatus.k141_3387186                 N 0 C 0
s Cercocebus_torquatus.k141_3969582                     54730  9 -    107033 atct-c---a-------gta
i Cercocebus_torquatus.k141_3969582                 N 0 C 0
s Cercopithecus_ascanius.k141_3371259                    1171  9 -      3853 atct-c---a-------gta
i Cercopithecus_ascanius.k141_3371259               N 0 C 0
s Cercopithecus_cephus.k141_598190                      25103  9 +     30494 atct-c---a-------gta
i Cercopithecus_cephus.k141_598190                  N 0 C 0
s Cercopithecus_diana.k141_1490386                       1126  9 -      4022 atct-c---a-------tta
i Cercopithecus_diana.k141_1490386                  N 0 C 0
s Cercopithecus_hamlyni.k141_381099                      1016  9 -      3505 atct-c---a-------gta
i Cercopithecus_hamlyni.k141_381099                 N 0 C 0
s Cercopithecus_lowei.k141_623764                       19827  9 +     35983 atct-c---a-------gta
i Cercopithecus_lowei.k141_623764                   N 0 C 0
s Cercopithecus_albogularis.ctg51                          11985603  9 +  12117833 atct-c---a-------gta
i Cercopithecus_albogularis.ctg51                         N 0 C 0
s Cercopithecus_mona.ctg12                           46473099  9 +  46592721 atct-c---a-------gta
i Cercopithecus_mona.ctg12                          N 0 C 0
s Cercopithecus_neglectus.k141_1474992                  30926  9 +     33420 atct-c---a-------gta
i Cercopithecus_neglectus.k141_1474992              N 0 C 0
s Cercopithecus_nictitans.k141_675209                     962  9 -      3443 atct-c---a-------gta
i Cercopithecus_nictitans.k141_675209               N 0 C 0
s Cercopithecus_petaurista.k141_2037881                  1953  9 -      4669 atct-c---a-------gta
i Cercopithecus_petaurista.k141_2037881             N 0 C 0
s Cercopithecus_pogonias.k141_1977419                    1757  9 -      4411 atct-c---a-------gta
i Cercopithecus_pogonias.k141_1977419               N 0 C 0
s Cercopithecus_roloway.k141_3372345                     1277  9 -      4205 atct-c---a-------tta
i Cercopithecus_roloway.k141_3372345                N 0 C 0
s Cheirogaleus_major.k141_1157592                       55139  9 -     68416 atct-c---a-------gtt
i Cheirogaleus_major.k141_1157592                   N 0 C 0
s Cheirogaleus_medius.k141_133808                        4189  9 +     13308 atct-c---a-------gtt
i Cheirogaleus_medius.k141_133808                   N 0 C 0
s Cheracebus_lucifer.k141_619653                         1455 13 -     18223 atct-c---act-ta--att
i Cheracebus_lucifer.k141_619653                    N 0 C 0
s Cheracebus_lugens.k141_203936                         18478 13 +     25473 atct-c---act-ta--att
i Cheracebus_lugens.k141_203936                     N 0 C 0
s Cheracebus_regulus.k141_2128895                       37517 13 +     57117 atct-c---act-ta--att
i Cheracebus_regulus.k141_2128895                   N 0 C 0
s Cheracebus_torquatus.k141_315545                      42192 13 +     54541 atct-c---act-ta--att
i Cheracebus_torquatus.k141_315545                  N 0 C 0
s Chinchilla_lanigera.JH721867.1                     15957657  9 +  43084221 caca-t---a-------gtt
i Chinchilla_lanigera.JH721867.1                    N 0 I 3
s Chiropotes_israelita.k141_1189915                     67066 13 +    196370 atct-c---act-ta--att
i Chiropotes_israelita.k141_1189915                 N 0 C 0
s Chiropotes_sagulatus.k141_773804                      11240 13 +     40510 atct-c---act-ta--att
i Chiropotes_sagulatus.k141_773804                  N 0 C 0
s Chlorocebus_aethiops.ctg22                         15134557  9 -  15256731 atct-c---a-------gta
i Chlorocebus_aethiops.ctg22                        N 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                  29603  9 -     53260 atct-c---a-------gta
i Chlorocebus_pygerythrus.k141_1486215              N 0 C 0
s Chlorocebus_sabaeus.CM001963.2                    101140051  9 + 101219884 atct-c---a-------gta
i Chlorocebus_sabaeus.CM001963.2                    N 0 C 0
s Colobus_angolensis.KN985967.1                      10878633  9 +  10971483 ATCT-C---A-------GTa
i Colobus_angolensis.KN985967.1                     N 0 C 0
s Colobus_guereza.LG08                              147659792  9 + 156195979 atct-c---a-------gta
i Colobus_guereza.LG08                              N 0 C 0
s Colobus_polykomos.k141_1406057                        11777  9 +     23629 atct-c---a-------gta
i Colobus_polykomos.k141_1406057                    N 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949             273771  3 -    399297 -----------------gtc
i Cricetomys_gambianus.CriGam_scaffold_949          N 0 C 0
s Cricetulus_griseus.LT883672.1                      53025241  9 +  72327488 caca-g---a-------gtc
i Cricetulus_griseus.LT883672.1                     N 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447              204490  9 -    956709 CACA-T---A-------TTA
i Ctenodactylus_gundi.CteGun_scaffold_447           N 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489             26393  9 -     67205 caca-t---a-------gtt
i Ctenomys_sociabilis.CteSoc_scaffold_19489         N 0 I 3
s Cuniculus_paca.CunPac_flattened_line_16637            14410  9 +     26546 caca-t---g-------ttt
i Cuniculus_paca.CunPac_flattened_line_16637        N 0 I 3
s Dasyprocta_punctata.DasPun_flattened_line_634         55887  9 -    236241 caca-t---a-------ggt
i Dasyprocta_punctata.DasPun_flattened_line_634     N 0 I 3
s Daubentonia_madagascariensis.ctg11                 16840994 13 +  31942871 acgt-c---aca-ta--gtt
i Daubentonia_madagascariensis.ctg11                N 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102            33049  5 -     73477 -----c---a-------gtt
i Dolichotis_patagonum.DolPat_scaffold_14102        N 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                    235206 12 -    369425 caca-gagga-------agc
i Ellobius_lutescens.LOEQ01003611.1                 N 0 I 218
s Ellobius_talpinus.LOJH01090055.1                       2215 12 -      7838 caca-gagga-------agc
i Ellobius_talpinus.LOJH01090055.1                  N 0 I 218
s Erythrocebus_patas.Contig8                         48766736  9 -  48907691 atct-c---a-------gta
i Erythrocebus_patas.Contig8                        N 0 C 0
s Eulemur_albifrons.k141_715837                          1210  9 +     13586 ttct-c---a-------gtt
i Eulemur_albifrons.k141_715837                     N 0 C 0
s Eulemur_collaris.k141_311830                           1148  9 -      6809 ttct-c---a-------gtt
i Eulemur_collaris.k141_311830                      N 0 C 0
s Eulemur_coronatus.k141_3240342                         7619  9 +     36558 ttct-c---a-------gtt
i Eulemur_coronatus.k141_3240342                    N 0 C 0
s Eulemur_flavifrons.k141_903901                         3936  9 +     60246 ttct-c---a-------gtt
i Eulemur_flavifrons.k141_903901                    N 0 C 0
s Eulemur_fulvus.k141_653297                             7423  9 +    109717 ttct-c---a-------gtt
i Eulemur_fulvus.k141_653297                        N 0 C 0
s Eulemur_macaco.k141_1341545                           11798  9 +     16540 ttct-c---a-------gtt
i Eulemur_macaco.k141_1341545                       N 0 C 0
s Eulemur_mongoz.k141_825972                            12074  9 +     27497 ttct-c---a-------gtt
i Eulemur_mongoz.k141_825972                        N 0 C 0
s Eulemur_rubriventer.k141_411740                       14532  9 +     26808 tttt-c---a-------gtt
i Eulemur_rubriventer.k141_411740                   N 0 C 0
s Eulemur_rufus.k141_1620292                            29264  9 +     46535 ttct-c---a-------gtt
i Eulemur_rufus.k141_1620292                        N 0 C 0
s Eulemur_sanfordi.k141_186399                          11987  9 -     29447 ttct-c---a-------gtt
i Eulemur_sanfordi.k141_186399                      N 0 C 0
s Fukomys_damarensis.KN123630.1                      13889212  9 -  19261668 cacg-t---a-------gtt
i Fukomys_damarensis.KN123630.1                     N 0 I 3
s Galago_moholi.ctg555                                 207310 13 -    847004 atct-c---a-tata--gtt
i Galago_moholi.ctg555                              N 0 C 0
s Galago_senegalensis.k141_964197                        9690 13 -     43889 atct-c---aga-ta--gtt
i Galago_senegalensis.k141_964197                   N 0 C 0
s Galagoides_demidoff.k141_1769638                       6710 13 +     27357 atct-c---a-t--actgtt
i Galagoides_demidoff.k141_1769638                  N 0 C 0
s Gorilla_beringei.k141_111300                           1310  9 -     14630 aTCT-C---a-------gtt
i Gorilla_beringei.k141_111300                      C 0 C 0
s Gorilla_gorilla.LT578340.1                        119648408  9 - 195582420 atct-c---a-------gtt
i Gorilla_gorilla.LT578340.1                        C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493               73462  9 +    118900 ccca-t---a-------gtt
i Graphiurus_murinus.GraMur_scaffold_4493           N 0 I 2
s Hapalemur_alaotrensis.k141_1198205                     1760  9 +      3980 attt-c---a-------gtt
i Hapalemur_alaotrensis.k141_1198205                N 0 C 0
s Hapalemur_gilberti.k141_97962                         24238  9 +     26611 attt-c---a-------gtt
i Hapalemur_gilberti.k141_97962                     N 0 C 0
s Hapalemur_griseus.k141_1387522                         1692  9 +     56096 attt-c---a-------gtt
i Hapalemur_griseus.k141_1387522                    N 0 C 0
s Hapalemur_meridionalis.k141_186231                    24965  9 -     42470 attt-c---a-------gtt
i Hapalemur_meridionalis.k141_186231                N 0 C 0
s Hapalemur_occidentalis.k141_797938                    41565  9 -     54384 attt-c---a-------gtt
i Hapalemur_occidentalis.k141_797938                N 0 C 0
s Heterocephalus_glaber.JH602058.1                    2547097  9 +  31725842 caca-t---a-------att
i Heterocephalus_glaber.JH602058.1                  N 0 I 3
s Hoolock_leuconedys.ctg2405                               11346  9 -     15084 aTCT-C---a-------gtt
i Hoolock_leuconedys.ctg2405                           C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                 2193  9 +     22540 taca-t---a-------gtt
i Hystrix_cristata.HysCri_scaffold_50788            N 0 I 3
s Ictidomys_tridecemlineatus.JH393315.1               7122028  9 +  13083262 caca-t---t-------gtt
i Ictidomys_tridecemlineatus.JH393315.1             N 0 C 0
s Indri_indri.k141_3334527                               8200  9 +      9207 atct-c---a-------gtt
i Indri_indri.k141_3334527                          N 0 C 0
s Lagothrix_lagothricha.k141_12968                      46031 13 -    147782 acct-c---act-ta--att
i Lagothrix_lagothricha.k141_12968                  N 0 C 0
s Lemur_catta.scaffold_1                            258403241  9 - 285822530 attg-c---a-------gtt
i Lemur_catta.scaffold_1                            N 0 C 0
s Lepilemur_ankaranensis.k141_884009                    20134  9 +     39228 atct-c---a-------gtt
i Lepilemur_ankaranensis.k141_884009                N 0 C 0
s Lepilemur_dorsalis.k141_134267                        49512  9 +     63517 atct-c---a-------gtt
i Lepilemur_dorsalis.k141_134267                    N 0 C 0
s Lepilemur_ruficaudatus.k141_617879                    74730  9 +    116806 gtct-c---a-------gtt
i Lepilemur_ruficaudatus.k141_617879                N 0 C 0
s Lepilemur_septentrionalis.k141_578524                 27770  9 -     33031 atct-c---a-------gtt
i Lepilemur_septentrionalis.k141_578524             N 0 C 0
s Lophocebus_aterrimus.ctg55                         19243823  9 +  19376315 atct-c---a-------gta
i Lophocebus_aterrimus.ctg55                        N 0 C 0
s Loris_lydekkerianus.k141_550999                        6732 13 +     84689 atct-c---a-tata--gtt
i Loris_lydekkerianus.k141_550999                   N 0 C 0
s Loris_tardigradus.ctg97                             3774491 13 +   6799190 atct-c---a-tata--gtt
i Loris_tardigradus.ctg97                           N 0 C 0
s Macaca_arctoides.k141_2201161                         15508  9 +     74745 atct-c---a-------gta
i Macaca_arctoides.k141_2201161                     N 0 C 0
s Macaca_assamensis.Contig65                         12702014  9 +  12821369 atct-c---a-------gta
i Macaca_assamensis.Contig65                        N 0 C 0
s Macaca_cyclopis.k119_1168412                           4107  9 +      6569 atct-c---a-------gta
i Macaca_cyclopis.k119_1168412                      N 0 C 0
s Macaca_fascicularis.k141_155037                       42407  9 +     63263 atct-c---a-------gta
i Macaca_fascicularis.k141_155037                   N 0 C 0
s Macaca_fuscata.k119_1068107                           10984  9 +     12679 atct-c---a-------gta
i Macaca_fuscata.k119_1068107                       N 0 C 0
s Macaca_leonina.k141_3421209                             557  9 +      3017 atct-c---a-------gta
i Macaca_leonina.k141_3421209                       N 0 C 0
s Macaca_maura.k141_251854                              42169  9 -     79256 atct-c---a-------gta
i Macaca_maura.k141_251854                          N 0 C 0
s Macaca_mulatta.NC_041755.1                        196031089  9 + 196197964 atct-c---a-------gta
i Macaca_mulatta.NC_041755.1                        N 0 C 0
s Macaca_nemestrina.KQ004885.1                       11441193  9 +  11645122 atct-c---a-------gta
i Macaca_nemestrina.KQ004885.1                      N 0 C 0
s Macaca_nigra.k141_282495                               1119  9 -     46448 atct-c---a-------gta
i Macaca_nigra.k141_282495                          N 0 C 0
s Macaca_radiata.k141_1580474                             946  9 -      3617 atct-c---a-------gta
i Macaca_radiata.k141_1580474                       N 0 C 0
s Macaca_siberu.k141_741907                             11279  9 -     55006 atct-c---a-------gta
i Macaca_siberu.k141_741907                         N 0 C 0
s Macaca_silenus.Contig12                            43836318  9 +  43892939 atct-c---a-------gta
i Macaca_silenus.Contig12                           N 0 C 0
s Macaca_thibetana.k99_116940                            3541  9 -      5978 atct-c---a-------gta
i Macaca_thibetana.k99_116940                       N 0 C 0
s Macaca_tonkeana.k141_2870633                           1121  9 -     27140 atct-c---a-------gta
i Macaca_tonkeana.k141_2870633                      N 0 C 0
s Mandrillus_leucophaeus.scaffold125                 43432984  9 -  43563597 atct-c---a-------gta
i Mandrillus_leucophaeus.scaffold125                N 0 C 0
s Mandrillus_sphinx.Contig144                         4445810  9 -   4543643 atct-c---a-------gta
i Mandrillus_sphinx.Contig144                       N 0 C 0
s Marmota_marmota.CZRN01000005.1                     36869872  9 +  64221397 caca-t---t-------gtt
i Marmota_marmota.CZRN01000005.1                    N 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233            7775 10 +     15977 cacaag---a-------gcc
i Meriones_unguiculatus.MerUng_scaffold_52233       N 0 I 3
s Mesocricetus_auratus.KB708139.1                     1042724  9 -  26018355 cata-g---a-------gtc
i Mesocricetus_auratus.KB708139.1                   N 0 C 0
s Microcebus_murinus.CM007691.1                      16506352  9 +  47401472 atct-c---a-------gtt
i Microcebus_murinus.CM007691.1                     N 0 C 0
s Miopithecus_ogouensis.k141_2666161                    31656  9 +     34273 atct-c---a-------gta
i Miopithecus_ogouensis.k141_2666161                N 0 C 0
s Mirza_zaza.k141_226143                                 1768  9 +      8497 atct-c---g-------gtt
i Mirza_zaza.k141_226143                            N 0 C 0
s Mus_caroli.LT608236.1                              70761244  9 +  92629107 CTCA-G---A-------GCC
i Mus_caroli.LT608236.1                             N 0 C 0
s Mus_musculus.chr16                                 75484319  9 +  98207768 CACA-G---A-------GCC
i Mus_musculus.chr16                                N 0 C 0
s Mus_pahari.LT608305.1                              67548859  9 +  89017189 CATA-G---A-------GCC
i Mus_pahari.LT608305.1                             N 0 C 0
s Mus_spretus.CM004110.1                             74323957  9 +  97876770 CACA-G---A-------GTC
i Mus_spretus.CM004110.1                            N 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643          6773  9 +     98495 ccca-t---a-------ctt
i Muscardinus_avellanarius.MusAve_scaffold_9643     N 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                 85987  9 -    117718 caca-t---a-------gtt
i Myocastor_coypus.MyoCoy_scaffold_3653             N 0 I 3
s Nannospalax_galili.KL201303.1                        107062  9 +    362372 caca-t---a-------gtt
i Nannospalax_galili.KL201303.1                     N 0 C 0
s Nasalis_larvatus.k141_153429                           4021  9 +     48152 atct-c---a-------gta
i Nasalis_larvatus.k141_153429                      N 0 C 0
s Nomascus_annamensis.k141_745421                         372  2 -      4569 ct------------------
i Nomascus_annamensis.k141_745421                   I 11 C 0
s Nomascus_concolor.k141_463898                          1632  9 +      1817 aTCT-C---A-------GTT
i Nomascus_concolor.k141_463898                     C 0 I 6
s Nomascus_gabriellae.k141_1350167                        783  2 +      9928 ct------------------
i Nomascus_gabriellae.k141_1350167                  I 11 C 0
s Nomascus_siki_b.tarseq_80                         20454  2 -  18771707 at------------------
i Nomascus_siki_b.tarseq_80                     I 26 C 0
s Nycticebus_bengalensis.LG16                        65563080 13 -  95554990 atct-c---a-tata--gtt
i Nycticebus_bengalensis.LG16                       N 0 C 0
s Nycticebus_coucang.k141_7268257                        2095 13 -      2537 atct-c---a-tata--gtt
i Nycticebus_coucang.k141_7268257                   N 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17  65665440 13 +  89412551 atct-c---a-tata--gtt
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17 N 0 C 0
s Octodon_degus.JH651621.1                            3674518  8 +  10294119 caca-t---a-------gt-
i Octodon_degus.JH651621.1                          N 0 I 3
s Ondatra_zibethicus.OndZib_scaffold_6821              120142  9 +    145789 cata-g---a-------agc
i Ondatra_zibethicus.OndZib_scaffold_6821           N 0 I 595
s Onychomys_torridus.OnyTor_scaffold_12578              32853  3 +     62360 -----------------GTC
i Onychomys_torridus.OnyTor_scaffold_12578          N 0 C 0
s Otolemur_crassicaudatus.k141_321880                   35378 13 +     38679 atct-c---a-tata--gtt
i Otolemur_crassicaudatus.k141_321880               N 0 C 0
s Otolemur_garnettii.GL873528.1                      18004816 13 -  38779656 ATCT-C---ATA-TA--GTt
i Otolemur_garnettii.GL873528.1                     N 0 C 0
s Pan_paniscus.CM003386.1                           127570651  9 - 205426864 atct-c---a-------gtt
i Pan_paniscus.CM003386.1                           C 0 C 0
s Pan_troglodytes.CM009241.2                        120147798  9 - 196562556 atct-c---a-------gtt
i Pan_troglodytes.CM009241.2                        C 0 C 0
s Papio_anubis.CM001492.2                           188151768  9 - 188283584 atct-c---a-------gta
i Papio_anubis.CM001492.2                           N 0 C 0
s Papio_cynocephalus.k141_386926                        47980  9 +     76494 atct-c---a-------gta
i Papio_cynocephalus.k141_386926                    N 0 C 0
s Papio_hamadryas.Contig15                           47509164  9 +  47705337 atct-c---a-------gta
i Papio_hamadryas.Contig15                          N 0 C 0
s Papio_kindae.k141_5458022                             63147  9 -    104429 atct-c---a-------gta
i Papio_kindae.k141_5458022                         N 0 C 0
s Papio_papio.k141_3561084                              12931  9 -     29451 atct-c---a-------gta
i Papio_papio.k141_3561084                          N 0 C 0
s Papio_ursinus.k141_3762866                            33336  9 +     35859 atct-c---a-------gta
i Papio_ursinus.k141_3762866                        N 0 C 0
s Perodicticus_ibeanus.k141_117958                       1081 13 -     23713 atct-c---a-tata--gtt
i Perodicticus_ibeanus.k141_117958                  N 0 C 0
s Perodicticus_potto.k141_713187                        20378 13 -     27972 atct-c---a-tata--gtt
i Perodicticus_potto.k141_713187                    N 0 C 0
s Peromyscus_maniculatus.KI615518.1                   4946007  9 -   8017169 caca-g---A-------GTC
i Peromyscus_maniculatus.KI615518.1                 N 0 C 0
s Piliocolobus_badius.k141_1497351                       1022  9 -      3310 atct-c---a-------gta
i Piliocolobus_badius.k141_1497351                  N 0 C 0
s Piliocolobus_gordonorum.k141_902470                   20928  9 -     82327 atct-c---a-------gta
i Piliocolobus_gordonorum.k141_902470               N 0 C 0
s Piliocolobus_kirkii.k141_557609                       17679  9 +     19957 atct-c---a-------gta
i Piliocolobus_kirkii.k141_557609                   N 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1           26735688  9 +  26888534 atct-c---a-------gta
i Piliocolobus_tephrosceles.PDMG02000036.1          N 0 C 0
s Pithecia_albicans.k141_991845                         39558 13 -     61926 atct-c---act-ta--att
i Pithecia_albicans.k141_991845                     N 0 C 0
s Pithecia_chrysocephala.k141_159118                    20987 13 +     78826 atct-c---act-ta--att
i Pithecia_chrysocephala.k141_159118                N 0 C 0
s Pithecia_hirsuta.k141_1152968                          4938 13 -     15800 atct-c---act-ta--att
i Pithecia_hirsuta.k141_1152968                     N 0 C 0
s Pithecia_mittermeieri.k141_2119203                     8136 13 -     16101 atct-c---act-ta--att
i Pithecia_mittermeieri.k141_2119203                N 0 C 0
s Pithecia_pissinattii.k141_1102319                      1445 13 +      9673 atct-c---act-ta--att
i Pithecia_pissinattii.k141_1102319                 N 0 C 0
s Pithecia_pithecia.tarseq_313                       13470439 13 -  19735023 atct-c---act-ta--att
i Pithecia_pithecia.tarseq_313                      N 0 C 0
s Pithecia_vanzolinii.k141_831006                        9347 13 -     31692 atct-c---act-ta--att
i Pithecia_vanzolinii.k141_831006                   N 0 C 0
s Plecturocebus_bernhardi.k141_959214                   18711 13 +     44506 atct-c---act-ta--att
i Plecturocebus_bernhardi.k141_959214               N 0 C 0
s Plecturocebus_brunneus.k141_498086                    18929 13 +     67491 atct-c---act-ta--att
i Plecturocebus_brunneus.k141_498086                N 0 C 0
s Plecturocebus_caligatus.k141_2539816                   9174 13 -     98129 atct-c---act-ta--att
i Plecturocebus_caligatus.k141_2539816              N 0 C 0
s Plecturocebus_cinerascens.k141_744510                 18774 13 +    147771 atct-c---act-ta--att
i Plecturocebus_cinerascens.k141_744510             N 0 C 0
s Plecturocebus_cupreus.k141_1223294                    19025 13 -     23762 atct-c---act-ta--att
i Plecturocebus_cupreus.k141_1223294                N 0 C 0
s Plecturocebus_dubius.k141_2078842                     18973 13 -     19696 atct-c---act-ta--att
i Plecturocebus_dubius.k141_2078842                 N 0 C 0
s Plecturocebus_grovesi.k141_242819                     18847 13 +    152463 atct-c---act-ta--att
i Plecturocebus_grovesi.k141_242819                 N 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                  5604 13 +      8943 atct-c---act-ta--att
i Plecturocebus_hoffmannsi.k141_1595076             N 0 C 0
s Plecturocebus_miltoni.k141_841561                      8564 13 +    134592 atct-c---act-ta--att
i Plecturocebus_miltoni.k141_841561                 N 0 C 0
s Plecturocebus_moloch.k141_890597                      19157 13 -     75465 atct-c---act-ta--att
i Plecturocebus_moloch.k141_890597                  N 0 C 0
s Pongo_abelii.NDHI03003816.1                          183205  9 -    373494 atct-c---A-------GTT
i Pongo_abelii.NDHI03003816.1                       C 0 C 0
s Pongo_pygmaeus.ctg62                               19803107  9 +  19899266 aTCT-C---A-------GTT
i Pongo_pygmaeus.ctg62                              C 0 C 0
s Presbytis_comata.k141_672698                           1258  9 -     15069 atct-c---a-------gta
i Presbytis_comata.k141_672698                      N 0 C 0
s Presbytis_mitrata.k141_860013                          1393  9 +     14865 atct-c---a-------gta
i Presbytis_mitrata.k141_860013                     N 0 C 0
s Prolemur_simus.MPIZ01000048.1                       6844622  9 +  12164890 attt-c---a-------gtt
i Prolemur_simus.MPIZ01000048.1                     N 0 C 0
s Propithecus_coquerelli.NW_012147997.1                663892  9 -   2312742 atct-c---a-------gtt
i Propithecus_coquerelli.NW_012147997.1             N 0 C 0
s Propithecus_coronatus.k141_844990                     30644  9 +     30823 atct-c---a-------gtt
i Propithecus_coronatus.k141_844990                 N 0 C 0
s Propithecus_diadema.k141_577245                       39085  9 +     52369 gtct-c---a-------gtt
i Propithecus_diadema.k141_577245                   N 0 C 0
s Propithecus_edwardsi.k141_1317105                     31474  9 -     44753 gtct-c---a-------gtt
i Propithecus_edwardsi.k141_1317105                 N 0 C 0
s Propithecus_perrieri.k141_7554                        13396  9 +     27322 gtct-c---a-------gtt
i Propithecus_perrieri.k141_7554                    N 0 C 0
s Propithecus_tattersalli.k141_907138                   13036  9 -     53241 gtct-c---a-------gtt
i Propithecus_tattersalli.k141_907138               N 0 C 0
s Propithecus_verreauxi.k141_158021                     35307  9 -     48185 atct-c---a-------gtt
i Propithecus_verreauxi.k141_158021                 N 0 C 0
s Psammomys_obesus.NESX01026517.1                       28836 10 +     77221 cacaag---a-------gtg
i Psammomys_obesus.NESX01026517.1                   N 0 C 0
s Pygathrix_cinerea.k141_374971                         25383  9 +     56732 atct-c---a-------gta
i Pygathrix_cinerea.k141_374971                     N 0 C 0
s Pygathrix_nigripes_b.ctg79                             6801872  9 +   6970761 atct-c---a-------gta
i Pygathrix_nigripes_b.ctg79                           N 0 C 0
s Pygathrix_nigripes_a.k141_101123                         1265  9 +     18040 atct-c---a-------gta
i Pygathrix_nigripes_a.k141_101123                    N 0 C 0
s Rattus_norvegicus.chr11                            13910782  9 +  90463843 CACA-A---A-------TCC
i Rattus_norvegicus.chr11                           N 0 C 0
s Rhinopithecus_bieti.k119_102124                       11820  9 -     14454 atct-c---a-------gta
i Rhinopithecus_bieti.k119_102124                   N 0 C 0
s Rhinopithecus_roxellana.NC_044549.1               206373146  9 - 206558726 atct-c---a-------gta
i Rhinopithecus_roxellana.NC_044549.1               N 0 C 0
s Rhinopithecus_strykeri.ctg4                        44850794  9 -  45163003 atct-c---a-------gta
i Rhinopithecus_strykeri.ctg4                       N 0 C 0
s Saimiri_boliviensis.NW_024100938.1                 15668582 13 -  43202129 atct-c---act-tA--ATT
i Saimiri_boliviensis.NW_024100938.1                N 0 C 0
s Saimiri_cassiquiarensis.k141_808270                     457 13 +     34089 atgt-c---act-ta--att
i Saimiri_cassiquiarensis.k141_808270               N 0 C 0
s Saimiri_macrodon.k141_2087127                           388 13 -     60842 atgt-c---act-ta--att
i Saimiri_macrodon.k141_2087127                     N 0 C 0
s Saimiri_oerstedii.k141_841116                           457 13 +     67014 atgt-c---act-ta--att
i Saimiri_oerstedii.k141_841116                     N 0 C 0
s Saimiri_sciureus.k141_1947592                           457 13 +     60816 atgt-c---act-ta--att
i Saimiri_sciureus.k141_1947592                     N 0 C 0
s Saimiri_ustus.k141_1282476                              385 13 -     76454 atct-c---act-ta--att
i Saimiri_ustus.k141_1282476                        N 0 C 0
s Sapajus_apella.ctg10                               17336965 13 -  30362882 atct-c---act-tt--att
i Sapajus_apella.ctg10                              N 0 C 0
s Sapajus_macrocephalus.k141_966464                     16566 13 -     62485 atct-c---act-tt--att
i Sapajus_macrocephalus.k141_966464                 N 0 C 0
s Semnopithecus_entellus.k141_1527475                   23808  9 +     26421 atct-c---a-------gta
i Semnopithecus_entellus.k141_1527475               N 0 C 0
s Semnopithecus_hypoleucos.k141_761524                   4270  9 +     20762 atct-c---a-------gta
i Semnopithecus_hypoleucos.k141_761524              N 0 C 0
s Semnopithecus_johnii.k141_1351450                     38003  9 +     40653 atct-c---a-------gta
i Semnopithecus_johnii.k141_1351450                 N 0 C 0
s Semnopithecus_priam.k141_198153                        8562  9 -     12194 atct-c---a-------gta
i Semnopithecus_priam.k141_198153                   N 0 C 0
s Semnopithecus_schistaceus.k141_653647                 21981  9 -     27512 atct-c---a-------gta
i Semnopithecus_schistaceus.k141_653647             N 0 C 0
s Semnopithecus_vetulus.k141_642050                     31002  9 -     33692 atct-c---a-------gta
i Semnopithecus_vetulus.k141_642050                 N 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332               94119  9 -    120886 CACA-G---A-------GTC
i Sigmodon_hispidus.SigHis_scaffold_11332           N 0 C 0
s Spermophilus_dauricus.KZ294190.1                    2235954  9 +   2842873 caca-t---t-------gtt
i Spermophilus_dauricus.KZ294190.1                  N 0 C 0
s Symphalangus_syndactylus.tarseq_24                 13897931  9 +  13920577 aTCT-C---a-------gtt
i Symphalangus_syndactylus.tarseq_24                C 0 I 68
s Tarsius_lariang.k141_609102                           22714 13 +     42269 attt-c---aca-ta--att
i Tarsius_lariang.k141_609102                       N 0 C 0
s Tarsius_wallacei.k141_48636                           56022 13 +     65473 attt-c---aca-ta--att
i Tarsius_wallacei.k141_48636                       N 0 C 0
s Theropithecus_gelada.CM009951.1                   194003304  9 - 194193292 atct-c---a-------gta
i Theropithecus_gelada.CM009951.1                   N 0 C 0
s Trachypithecus_auratus.k141_738098                    22380  9 +     38948 atct-c---a-------gta
i Trachypithecus_auratus.k141_738098                N 0 C 0
s Trachypithecus_crepusculus.k141_1588528               16107  9 -     32910 atct-c---a-------gta
i Trachypithecus_crepusculus.k141_1588528           N 0 C 0
s Trachypithecus_cristatus.k141_27198                   22005  9 +     24652 atct-c---a-------gta
i Trachypithecus_cristatus.k141_27198               N 0 C 0
s Trachypithecus_francoisi.k141_1178450                   890  9 -      3559 atct-c---a-------gta
i Trachypithecus_francoisi.k141_1178450             N 0 C 0
s Trachypithecus_geei.k141_670367                       38827  9 -     54611 atct-c---a-------gta
i Trachypithecus_geei.k141_670367                   N 0 C 0
s Trachypithecus_germaini.k141_809503                   14828  9 +     17312 atct-c---a-------gta
i Trachypithecus_germaini.k141_809503               N 0 C 0
s Trachypithecus_hatinhensis.k141_357672                22198  9 -     25040 atct-c---a-------gta
i Trachypithecus_hatinhensis.k141_357672            N 0 C 0
s Trachypithecus_laotum.k141_171445                       864  9 +      3528 atct-c---a-------gta
i Trachypithecus_laotum.k141_171445                 N 0 C 0
s Trachypithecus_leucocephalus.k141_283605              47226  9 +     51589 atct-c---a-------gta
i Trachypithecus_leucocephalus.k141_283605          N 0 C 0
s Trachypithecus_melamera.k141_238507                   10394  9 +     14732 atct-c---a-------gta
i Trachypithecus_melamera.k141_238507               N 0 C 0
s Trachypithecus_obscurus.k141_1115109                    872  9 -     28054 atct-c---a-------gta
i Trachypithecus_obscurus.k141_1115109              N 0 C 0
s Trachypithecus_phayrei.ctg3                        44655667  9 -  44834318 atct-c---a-------gta
i Trachypithecus_phayrei.ctg3                       N 0 C 0
s Trachypithecus_pileatus.k141_469329                     675  9 +      3372 atct-c---a-------gta
i Trachypithecus_pileatus.k141_469329               N 0 C 0
s Tupaia_chinensis.KB320831.1                         2785943  4 -   3938065 ---------a-------gct
i Tupaia_chinensis.KB320831.1                       N 0 C 0
s Tupaia_tana.TupTan_flattened_line_251551               4336  4 -      5019 ---------a-------gtt
i Tupaia_tana.TupTan_flattened_line_251551          N 0 C 0
s Varecia_rubra.k141_432109                              1560  9 -     20643 attt-c---a-------gtt
i Varecia_rubra.k141_432109                         N 0 C 0
s Varecia_variegata.k141_775891                         21105  9 -     33872 attt-c---a-------gtt
i Varecia_variegata.k141_775891                     N 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                   123127  9 -    134049 caca-t---t-------gtt
i Xerus_inauris.XerIna_scaffold_7898                N 0 C 0

a score=0.000000
s hg38.chr4_GL000008v2_random                            7926 13 +    209709 A---C-CTT---T--CT-TTTGG
s Acomys_cahirinus.AcoCah_scaffold_1625                108338  3 -    189883 A---T-C----------------
i Acomys_cahirinus.AcoCah_scaffold_1625             C 0 I 5
s Allenopithecus_nigroviridis.k141_3103707              58949 13 +     61638 a---c-ctt---t--ct-tttgg
i Allenopithecus_nigroviridis.k141_3103707          C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                    50757 13 +     53391 a---c-ctt---t--ct-tttgg
i Allochrocebus_lhoesti.k141_4825038                C 0 C 0
s Allochrocebus_preussi.k141_1202907                     1481 13 +     72529 a---c-ctt---t--ct-tttgg
i Allochrocebus_preussi.k141_1202907                C 0 C 0
s Allochrocebus_solatus.k141_787528                      1058 13 +      3797 a---c-ctt---t--ct-tttgg
i Allochrocebus_solatus.k141_787528                 C 0 C 0
s Alouatta_belzebul.k141_1818029                         6142 13 -     18050 a---c-ctt---t--ct-tttgt
i Alouatta_belzebul.k141_1818029                    C 0 C 0
s Alouatta_caraya.k141_5460                              7259 13 -     11521 a---c-ctt---t--ct-tttgt
i Alouatta_caraya.k141_5460                         C 0 C 0
s Alouatta_discolor.k141_811576                          6817 13 -     21359 a---c-ctt---t--ct-tttgt
i Alouatta_discolor.k141_811576                     C 0 C 0
s Alouatta_juara.k141_1856473                            5200 13 +      7227 a---c-ctt---t--ct-tttgt
i Alouatta_juara.k141_1856473                       C 0 C 0
s Alouatta_macconnelli.k141_1331706                      6115 13 -     10438 a---c-ctt---t--ct-tttgt
i Alouatta_macconnelli.k141_1331706                 C 0 C 0
s Alouatta_nigerrima.k141_2718643                        2769 13 +      7047 a---c-ctt---t--ct-tttgt
i Alouatta_nigerrima.k141_2718643                   C 0 C 0
s Alouatta_palliata.k141_1316127                         6053 13 +     10410 a---c-ctt---t--ct-tttgt
i Alouatta_palliata.k141_1316127                    C 0 C 0
s Alouatta_puruensis.k141_390786                         7330 13 -      7615 a---c-ctt---t--ct-tttgt
i Alouatta_puruensis.k141_390786                    C 0 C 0
s Alouatta_seniculus.k141_990213                         2774 13 +      6429 a---c-ctt---t--ct-tttgt
i Alouatta_seniculus.k141_990213                    C 0 C 0
s Aotus_azarae.k141_3170768                             58457 13 +     78111 a---c-ctt---t--ct-tttgt
i Aotus_azarae.k141_3170768                         C 0 C 0
s Aotus_griseimembra.k141_3275623                        1388 13 +     22701 a---c-ctt---t--ct-tttgt
i Aotus_griseimembra.k141_3275623                   C 0 C 0
s Aotus_nancymaae.KZ196176.1                          5745348 13 +   9889416 A---C-CTT---T--CT-TTTGT
i Aotus_nancymaae.KZ196176.1                        C 0 C 0
s Aotus_trivirgatus.k141_1740727                         1940 13 -    104377 a---c-ctt---t--ct-tttgt
i Aotus_trivirgatus.k141_1740727                    C 0 C 0
s Aotus_vociferans.k141_718647                           1940 13 +     23246 a---c-ctt---t--ct-tttgt
i Aotus_vociferans.k141_718647                      C 0 C 0
s Arctocebus_calabarensis.k141_1161114                  14246 11 +     17483 a---c-cac---t--tt-tca--
i Arctocebus_calabarensis.k141_1161114              C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                         9535201 13 +  39197703 a---c-ctt---t--ct-tttgt
i Ateles_geoffroyi_b.tarseq_2582                       C 0 C 0
s Ateles_belzebuth.k141_1348307                         56489 13 +     85812 a---c-ctt---t--ct-tttgt
i Ateles_belzebuth.k141_1348307                     C 0 C 0
s Ateles_chamek.k141_1072810                             7486 13 +     89302 a---c-ctt---t--ct-tttgt
i Ateles_chamek.k141_1072810                        C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                         11995 13 -     58268 a---c-ctt---t--ct-tttgt
i Ateles_geoffroyi_a.k141_1300742                     C 0 C 0
s Ateles_marginatus.k141_899112                         59983 13 +    119057 a---c-ctt---t--ct-tttgt
i Ateles_marginatus.k141_899112                     C 0 C 0
s Ateles_paniscus.k141_1631200                           1934 13 -     25888 a---c-ctt---t--ct-tttgt
i Ateles_paniscus.k141_1631200                      C 0 C 0
s Avahi_laniger.k141_2840928                             2810 10 -     16375 a---c-cat---t--tt-tt---
i Avahi_laniger.k141_2840928                        C 0 I 27
s Avahi_peyrierasi.k141_767228                           8780 10 -      9688 a---c-cat---t--tt-tt---
i Avahi_peyrierasi.k141_767228                      C 0 C 0
s Cacajao_ayresi.k141_724503                           109858 13 -    171031 a---c-ctt---t--ct-tttgt
i Cacajao_ayresi.k141_724503                        C 0 C 0
s Cacajao_calvus.k141_96166                              8884 13 +    125063 a---c-ctt---t--ct-tttgt
i Cacajao_calvus.k141_96166                         C 0 C 0
s Cacajao_hosomi.k141_303789                            10932 13 -    216513 a---c-ctt---t--ct-tttgt
i Cacajao_hosomi.k141_303789                        C 0 C 0
s Cacajao_melanocephalus.k141_1160263                    3471 13 -    134917 a---c-ctt---t--ct-tttgt
i Cacajao_melanocephalus.k141_1160263               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_647363               248  3 +      1887 ------------------cct--
i Capromys_pilorides.CapPil_scaffold_647363         I 3 C 0
s Carlito_syrichta.NW_007248099.1                      305242 11 +    345090 A---C-CCT---T--CT-TTT--
i Carlito_syrichta.NW_007248099.1                   C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037               26800  3 +     33760 a---c-c----------------
i Castor_canadensis.CasCan_scaffold_47037           C 0 I 3
s Cavia_aperea.AVPZ01000278.1                        15783541  3 -  24422027 a---t-t----------------
i Cavia_aperea.AVPZ01000278.1                       C 0 I 3
s Cavia_porcellus.DS562889.1                         15795475  3 -  24440124 a---t-t----------------
i Cavia_porcellus.DS562889.1                        C 0 I 3
s Cavia_tschudii.CavTsc_scaffold_488                   173666  3 +    436027 a---t-t----------------
i Cavia_tschudii.CavTsc_scaffold_488                C 0 I 3
s Cebus_albifrons.Contig22                           18886669 13 -  29618158 a---c-ctt---t--ct-tttgt
i Cebus_albifrons.Contig22                          C 0 C 0
s Cebus_olivaceus.k141_93739                             4215 13 -     26817 a---c-ctt---t--ct-tttgt
i Cebus_olivaceus.k141_93739                        C 0 C 0
s Cebus_unicolor.k141_239009                             8455 13 +     25043 a---c-ctt---t--ct-tttgt
i Cebus_unicolor.k141_239009                        C 0 C 0
s Cephalopachus_bancanus.k141_702587                     4279 11 +     21754 a---c-cct---t--ct-ttt--
i Cephalopachus_bancanus.k141_702587                C 0 I 28
s Cercocebus_atys.KQ010443.1                          6550747 13 +   6739814 a---c-ctt---t--ct-tttgg
i Cercocebus_atys.KQ010443.1                        C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                  52224 13 -     54931 a---c-ctt---t--ct-tttgg
i Cercocebus_chrysogaster.k141_2951608              C 0 C 0
s Cercocebus_lunulatus.k141_3387186                     17208 13 -     19697 a---c-ctt---t--ct-tttgg
i Cercocebus_lunulatus.k141_3387186                 C 0 C 0
s Cercocebus_torquatus.k141_3969582                     54739 13 -    107033 a---c-ctt---t--ct-tttgg
i Cercocebus_torquatus.k141_3969582                 C 0 C 0
s Cercopithecus_ascanius.k141_3371259                    1180 13 -      3853 a---c-ctt---t--ct-tttgg
i Cercopithecus_ascanius.k141_3371259               C 0 C 0
s Cercopithecus_cephus.k141_598190                      25112 13 +     30494 a---c-ctt---t--ct-tttgg
i Cercopithecus_cephus.k141_598190                  C 0 C 0
s Cercopithecus_diana.k141_1490386                       1135 13 -      4022 a---c-ctt---t--ct-tttgg
i Cercopithecus_diana.k141_1490386                  C 0 C 0
s Cercopithecus_hamlyni.k141_381099                      1025 13 -      3505 a---c-ttt---t--ct-tttgg
i Cercopithecus_hamlyni.k141_381099                 C 0 C 0
s Cercopithecus_lowei.k141_623764                       19836 13 +     35983 a---c-ctt---t--ct-tttgg
i Cercopithecus_lowei.k141_623764                   C 0 C 0
s Cercopithecus_albogularis.ctg51                          11985612 13 +  12117833 a---c-ctt---t--ct-tttgg
i Cercopithecus_albogularis.ctg51                         C 0 C 0
s Cercopithecus_mona.ctg12                           46473108 13 +  46592721 a---c-ctt---t--ct-tttgg
i Cercopithecus_mona.ctg12                          C 0 C 0
s Cercopithecus_neglectus.k141_1474992                  30935 13 +     33420 a---c-ctt---t--ct-tttgg
i Cercopithecus_neglectus.k141_1474992              C 0 C 0
s Cercopithecus_nictitans.k141_675209                     971 13 -      3443 a---c-ctt---t--ct-tttgg
i Cercopithecus_nictitans.k141_675209               C 0 C 0
s Cercopithecus_petaurista.k141_2037881                  1962 13 -      4669 a---c-ctt---t--ct-tttgg
i Cercopithecus_petaurista.k141_2037881             C 0 C 0
s Cercopithecus_pogonias.k141_1977419                    1766 13 -      4411 a---c-ctt---t--ct-tttgg
i Cercopithecus_pogonias.k141_1977419               C 0 C 0
s Cercopithecus_roloway.k141_3372345                     1286 13 -      4205 a---c-ctt---t--ct-tttgg
i Cercopithecus_roloway.k141_3372345                C 0 C 0
s Cheirogaleus_major.k141_1157592                       55148 12 -     68416 a---c-cat---tatct-tt---
i Cheirogaleus_major.k141_1157592                   C 0 C 0
s Cheirogaleus_medius.k141_133808                        4198 12 +     13308 a---c-cat---tattt-tt---
i Cheirogaleus_medius.k141_133808                   C 0 C 0
s Cheracebus_lucifer.k141_619653                         1468 13 -     18223 a---c-ctt---t--ct-tttgt
i Cheracebus_lucifer.k141_619653                    C 0 C 0
s Cheracebus_lugens.k141_203936                         18491 13 +     25473 a---c-ctt---t--ct-tttgt
i Cheracebus_lugens.k141_203936                     C 0 C 0
s Cheracebus_regulus.k141_2128895                       37530 13 +     57117 a---c-ctt---t--ct-tttgt
i Cheracebus_regulus.k141_2128895                   C 0 C 0
s Cheracebus_torquatus.k141_315545                      42205 13 +     54541 a---c-ctt---t--ct-tttgt
i Cheracebus_torquatus.k141_315545                  C 0 C 0
s Chinchilla_lanigera.JH721867.1                     15957669  3 +  43084221 ------------------cct--
i Chinchilla_lanigera.JH721867.1                    I 3 C 0
s Chiropotes_israelita.k141_1189915                     67079 13 +    196370 a---c-ctt---t--ct-tttgt
i Chiropotes_israelita.k141_1189915                 C 0 C 0
s Chiropotes_sagulatus.k141_773804                      11253 13 +     40510 a---c-ctt---t--ct-tttgt
i Chiropotes_sagulatus.k141_773804                  C 0 C 0
s Chlorocebus_aethiops.ctg22                         15134566 13 -  15256731 a---c-ctt---t--ct-tttgg
i Chlorocebus_aethiops.ctg22                        C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                  29612 13 -     53260 a---c-ctt---t--ct-tttgg
i Chlorocebus_pygerythrus.k141_1486215              C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                    101140060 13 + 101219884 a---c-ctt---t--ct-tttgg
i Chlorocebus_sabaeus.CM001963.2                    C 0 C 0
s Colobus_angolensis.KN985967.1                      10878642 13 +  10971483 a---c-ctt---t--ct-tttgg
i Colobus_angolensis.KN985967.1                     C 0 C 0
s Colobus_guereza.LG08                              147659801 13 + 156195979 a---c-ctt---t--ct-tttgg
i Colobus_guereza.LG08                              C 0 C 0
s Colobus_polykomos.k141_1406057                        11786 13 +     23629 a---c-ctt---t--ct-tttgg
i Colobus_polykomos.k141_1406057                    C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489             26405  3 -     67205 ------------------cct--
i Ctenomys_sociabilis.CteSoc_scaffold_19489         I 3 C 0
s Cuniculus_paca.CunPac_flattened_line_16637            14422  3 +     26546 ------------------cct--
i Cuniculus_paca.CunPac_flattened_line_16637        I 3 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634         55899  3 -    236241 ------------------cct--
i Dasyprocta_punctata.DasPun_flattened_line_634     I 3 C 0
s Cricetomys_gambianus.CriGam_scaffold_949             273774  3 -    399297 a---t-t----------------
i Cricetomys_gambianus.CriGam_scaffold_949          C 0 I 5
s Cricetulus_griseus.LT883672.1                      53025250  3 +  72327488 a---t-c----------------
i Cricetulus_griseus.LT883672.1                     C 0 I 5
s Ctenodactylus_gundi.CteGun_scaffold_447              204499  2 -    956709 A---T------------------
i Ctenodactylus_gundi.CteGun_scaffold_447           C 0 C 0
s Daubentonia_madagascariensis.ctg11                 16841007 10 +  31942871 a---c-cat---t--tt-tt---
i Daubentonia_madagascariensis.ctg11                C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102            33054  3 -     73477 a---t-g----------------
i Dolichotis_patagonum.DolPat_scaffold_14102        C 0 I 3
s Ellobius_lutescens.LOEQ01003611.1                    235436  3 -    369425 A---T-C----------------
i Ellobius_lutescens.LOEQ01003611.1                 I 218 I 5
s Ellobius_talpinus.LOJH01090055.1                       2445  3 -      7838 A---T-C----------------
i Ellobius_talpinus.LOJH01090055.1                  I 218 I 5
s Erythrocebus_patas.Contig8                         48766745 13 -  48907691 a---c-ctt---t--ct-tttgg
i Erythrocebus_patas.Contig8                        C 0 C 0
s Eulemur_albifrons.k141_715837                          1219 12 +     13586 a---c-cattttt---t-tt---
i Eulemur_albifrons.k141_715837                     C 0 C 0
s Eulemur_collaris.k141_311830                           1157 11 -      6809 a---c-cattt-t---t-tt---
i Eulemur_collaris.k141_311830                      C 0 C 0
s Eulemur_coronatus.k141_3240342                         7628 10 +     36558 a---c-catt--t---t-tt---
i Eulemur_coronatus.k141_3240342                    C 0 C 0
s Eulemur_flavifrons.k141_903901                         3945 10 +     60246 a---c-catt--t---t-tt---
i Eulemur_flavifrons.k141_903901                    C 0 C 0
s Eulemur_fulvus.k141_653297                             7432 11 +    109717 a---c-cattt-t---t-tt---
i Eulemur_fulvus.k141_653297                        C 0 C 0
s Eulemur_macaco.k141_1341545                           11807 10 +     16540 a---c-catt--t---t-tt---
i Eulemur_macaco.k141_1341545                       C 0 C 0
s Eulemur_mongoz.k141_825972                            12083 11 +     27497 a---c-cattt-t---t-tt---
i Eulemur_mongoz.k141_825972                        C 0 C 0
s Eulemur_rubriventer.k141_411740                       14541  9 +     26808 a---c-cat---t---t-tt---
i Eulemur_rubriventer.k141_411740                   C 0 C 0
s Eulemur_rufus.k141_1620292                            29273 11 +     46535 a---c-cattt-t---t-tt---
i Eulemur_rufus.k141_1620292                        C 0 C 0
s Eulemur_sanfordi.k141_186399                          11996 11 -     29447 a---c-cattt-t---t-tt---
i Eulemur_sanfordi.k141_186399                      C 0 C 0
s Fukomys_damarensis.KN123630.1                      13889224  3 -  19261668 ------------------cct--
i Fukomys_damarensis.KN123630.1                     I 3 C 0
s Galago_moholi.ctg555                                 207323 11 -    847004 a---c-cat---t--tt-tca--
i Galago_moholi.ctg555                              C 0 I 9
s Galago_senegalensis.k141_964197                        9703 11 -     43889 a---c-ctt---t--tt-tca--
i Galago_senegalensis.k141_964197                   C 0 I 9
s Galagoides_demidoff.k141_1769638                       6723 11 +     27357 c---c-cat---t--tt-tca--
i Galagoides_demidoff.k141_1769638                  C 0 I 9
s Gorilla_beringei.k141_111300                           1319 12 -     14630 a---c-ctt---t--c--tttgg
i Gorilla_beringei.k141_111300                      C 0 C 0
s Gorilla_gorilla.LT578340.1                        119648417 12 - 195582420 a---c-ctt---t--c--tttgg
i Gorilla_gorilla.LT578340.1                        C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493               73473  2 +    118900 -------------------ct--
i Graphiurus_murinus.GraMur_scaffold_4493           I 2 C 0
s Hapalemur_alaotrensis.k141_1198205                     1769  9 +      3980 a---c-aat---t---t-tt---
i Hapalemur_alaotrensis.k141_1198205                C 0 C 0
s Hapalemur_gilberti.k141_97962                         24247  9 +     26611 a---c-aat---t---t-tt---
i Hapalemur_gilberti.k141_97962                     C 0 C 0
s Hapalemur_griseus.k141_1387522                         1701  9 +     56096 a---c-aat---t---t-tt---
i Hapalemur_griseus.k141_1387522                    C 0 C 0
s Hapalemur_meridionalis.k141_186231                    24974  9 -     42470 a---c-aat---t---t-tt---
i Hapalemur_meridionalis.k141_186231                C 0 C 0
s Hapalemur_occidentalis.k141_797938                    41574  9 -     54384 a---c-aat---t---t-tt---
i Hapalemur_occidentalis.k141_797938                C 0 C 0
s Heterocephalus_glaber.JH602058.1                    2547109  3 +  31725842 ------------------cct--
i Heterocephalus_glaber.JH602058.1                  I 3 C 0
s Hoolock_leuconedys.ctg2405                               11355 13 -     15084 a---c-ctt---t--tt-tctgg
i Hoolock_leuconedys.ctg2405                           C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                 2205  3 +     22540 ------------------cct--
i Hystrix_cristata.HysCri_scaffold_50788            I 3 C 0
s Ictidomys_tridecemlineatus.JH393315.1               7122037  4 +  13083262 a---cct----------------
i Ictidomys_tridecemlineatus.JH393315.1             C 0 I 2
s Indri_indri.k141_3334527                               8209 10 +      9207 a---c-cat---t--tt-tt---
i Indri_indri.k141_3334527                          C 0 C 0
s Lagothrix_lagothricha.k141_12968                      46044 13 -    147782 a---c-ctt---t--ct-tttga
i Lagothrix_lagothricha.k141_12968                  C 0 C 0
s Lemur_catta.scaffold_1                            258403250  9 - 285822530 a---c-aat---t---t-tt---
i Lemur_catta.scaffold_1                            C 0 C 0
s Lepilemur_ankaranensis.k141_884009                    20143 11 +     39228 a---c-cat---g-ttt-tt---
i Lepilemur_ankaranensis.k141_884009                C 0 C 0
s Lepilemur_dorsalis.k141_134267                        49521 11 +     63517 a---c-cat---g-ttt-tt---
i Lepilemur_dorsalis.k141_134267                    C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                    74739 11 +    116806 a---c-cat---g-ttt-tt---
i Lepilemur_ruficaudatus.k141_617879                C 0 C 0
s Lepilemur_septentrionalis.k141_578524                 27779 11 -     33031 a---c-cat---g-ttt-tt---
i Lepilemur_septentrionalis.k141_578524             C 0 C 0
s Lophocebus_aterrimus.ctg55                         19243832 13 +  19376315 a---c-ctt---t--ct-tttgg
i Lophocebus_aterrimus.ctg55                        C 0 C 0
s Loris_lydekkerianus.k141_550999                        6745 11 +     84689 c---c-ctt---t--tt-tca--
i Loris_lydekkerianus.k141_550999                   C 0 C 0
s Loris_tardigradus.ctg97                             3774504 11 +   6799190 c---c-ctt---t--tt-tca--
i Loris_tardigradus.ctg97                           C 0 C 0
s Macaca_arctoides.k141_2201161                         15517 13 +     74745 a---c-ctt---t--ct-tttgg
i Macaca_arctoides.k141_2201161                     C 0 C 0
s Macaca_assamensis.Contig65                         12702023 13 +  12821369 a---c-ctt---t--ct-tttgg
i Macaca_assamensis.Contig65                        C 0 C 0
s Macaca_cyclopis.k119_1168412                           4116 13 +      6569 a---c-ctt---t--ct-tttgg
i Macaca_cyclopis.k119_1168412                      C 0 C 0
s Macaca_fascicularis.k141_155037                       42416 13 +     63263 a---c-ctt---t--ct-tttgg
i Macaca_fascicularis.k141_155037                   C 0 C 0
s Macaca_fuscata.k119_1068107                           10993 13 +     12679 a---c-ctt---t--ct-tttgg
i Macaca_fuscata.k119_1068107                       C 0 C 0
s Macaca_leonina.k141_3421209                             566 13 +      3017 a---c-ctt---t--ct-tttgg
i Macaca_leonina.k141_3421209                       C 0 C 0
s Macaca_maura.k141_251854                              42178 13 -     79256 a---c-ctt---t--ct-tttgg
i Macaca_maura.k141_251854                          C 0 C 0
s Macaca_mulatta.NC_041755.1                        196031098 13 + 196197964 a---c-ctt---t--ct-tttgg
i Macaca_mulatta.NC_041755.1                        C 0 C 0
s Macaca_nemestrina.KQ004885.1                       11441202 13 +  11645122 a---c-ctt---t--ct-tttgg
i Macaca_nemestrina.KQ004885.1                      C 0 C 0
s Macaca_nigra.k141_282495                               1128 13 -     46448 a---c-ctt---t--ct-tttgg
i Macaca_nigra.k141_282495                          C 0 C 0
s Macaca_radiata.k141_1580474                             955 13 -      3617 a---c-ctt---t--ct-tttgg
i Macaca_radiata.k141_1580474                       C 0 C 0
s Macaca_siberu.k141_741907                             11288 13 -     55006 a---c-ctt---t--ct-tttgg
i Macaca_siberu.k141_741907                         C 0 C 0
s Macaca_silenus.Contig12                            43836327 13 +  43892939 a---c-ctt---t--ct-tttgg
i Macaca_silenus.Contig12                           C 0 C 0
s Macaca_thibetana.k99_116940                            3550 13 -      5978 a---c-ctt---t--ct-tttgg
i Macaca_thibetana.k99_116940                       C 0 C 0
s Macaca_tonkeana.k141_2870633                           1130 13 -     27140 a---c-ctt---t--ct-tttgg
i Macaca_tonkeana.k141_2870633                      C 0 C 0
s Mandrillus_leucophaeus.scaffold125                 43432993 13 -  43563597 a---c-ctt---t--ct-tttgg
i Mandrillus_leucophaeus.scaffold125                C 0 C 0
s Mandrillus_sphinx.Contig144                         4445819 13 -   4543643 a---c-ctt---t--ct-tttgg
i Mandrillus_sphinx.Contig144                       C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233            7788  3 +     15977 ------------------cat--
i Meriones_unguiculatus.MerUng_scaffold_52233       I 3 I 2
s Marmota_marmota.CZRN01000005.1                     36869881  4 +  64221397 a---cct----------------
i Marmota_marmota.CZRN01000005.1                    C 0 I 2
s Mesocricetus_auratus.KB708139.1                     1042733  3 -  26018355 a---t-c----------------
i Mesocricetus_auratus.KB708139.1                   C 0 I 5
s Microcebus_murinus.CM007691.1                      16506361 12 +  47401472 a---c-ctt---t-tttatt---
i Microcebus_murinus.CM007691.1                     C 0 C 0
s Microtus_ochrogaster.CM001673.1                    22815096  3 -  98408828 A---T-C----------------
i Microtus_ochrogaster.CM001673.1                   N 0 I 5
s Miopithecus_ogouensis.k141_2666161                    31665 13 +     34273 a---c-ctt---t--ct-tttgg
i Miopithecus_ogouensis.k141_2666161                C 0 C 0
s Mirza_zaza.k141_226143                                 1777 10 +      8497 a---c-tt----t-ttt-tt---
i Mirza_zaza.k141_226143                            C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                 85999  3 -    117718 ------------------cct--
i Myocastor_coypus.MyoCoy_scaffold_3653             I 3 C 0
s Mus_caroli.LT608236.1                              70761253  3 +  92629107 A---T-C----------------
i Mus_caroli.LT608236.1                             C 0 I 5
s Mus_musculus.chr16                                 75484328  3 +  98207768 A---T-C----------------
i Mus_musculus.chr16                                C 0 I 5
s Mus_pahari.LT608305.1                              67548868  3 +  89017189 A---T-C----------------
i Mus_pahari.LT608305.1                             C 0 I 5
s Mus_spretus.CM004110.1                             74323966  3 +  97876770 A---T-C----------------
i Mus_spretus.CM004110.1                            C 0 I 5
s Muscardinus_avellanarius.MusAve_scaffold_9643          6782  3 +     98495 a---c-a----------------
i Muscardinus_avellanarius.MusAve_scaffold_9643     C 0 I 2
s Nannospalax_galili.KL201303.1                        107071  3 +    362372 g---c-c----------------
i Nannospalax_galili.KL201303.1                     C 0 I 5
s Nasalis_larvatus.k141_153429                           4030 13 +     48152 a---c-ctt---t--ct-tttgg
i Nasalis_larvatus.k141_153429                      C 0 C 0
s Nomascus_concolor.k141_463898                          1647  7 +      1817 ---------------TT-TCTGA
i Nomascus_concolor.k141_463898                     I 6 C 0
s Nycticebus_bengalensis.LG16                        65563093 11 -  95554990 a---c-cat---t--tt-tca--
i Nycticebus_bengalensis.LG16                       C 0 C 0
s Nycticebus_coucang.k141_7268257                        2108 11 -      2537 a---c-cat---t--tt-tca--
i Nycticebus_coucang.k141_7268257                   C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17  65665453 11 +  89412551 a---c-cat---t--tt-tca--
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17 C 0 C 0
s Octodon_degus.JH651621.1                            3674529  3 +  10294119 ------------------cct--
i Octodon_degus.JH651621.1                          I 3 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821              120746  3 +    145789 A---T-C----------------
i Ondatra_zibethicus.OndZib_scaffold_6821           I 595 I 5
s Onychomys_torridus.OnyTor_scaffold_12578              32856  3 +     62360 A---T-C----------------
i Onychomys_torridus.OnyTor_scaffold_12578          C 0 I 5
s Otolemur_crassicaudatus.k141_321880                   35391 11 +     38679 a---c-cat---t--tt-tca--
i Otolemur_crassicaudatus.k141_321880               C 0 I 9
s Otolemur_garnettii.GL873528.1                      18004829 11 -  38779656 a---c-cat---t--tt-tca--
i Otolemur_garnettii.GL873528.1                     C 0 I 9
s Pan_paniscus.CM003386.1                           127570660 13 - 205426864 a---c-ctt---t--ct-tttgg
i Pan_paniscus.CM003386.1                           C 0 C 0
s Pan_troglodytes.CM009241.2                        120147807 13 - 196562556 a---c-ctt---t--ct-tttgg
i Pan_troglodytes.CM009241.2                        C 0 C 0
s Papio_anubis.CM001492.2                           188151777 13 - 188283584 a---c-ctt---t--ct-tttgg
i Papio_anubis.CM001492.2                           C 0 C 0
s Papio_cynocephalus.k141_386926                        47989 13 +     76494 a---c-ctt---t--ct-tttgg
i Papio_cynocephalus.k141_386926                    C 0 C 0
s Papio_hamadryas.Contig15                           47509173 13 +  47705337 a---c-ctt---t--ct-tttgg
i Papio_hamadryas.Contig15                          C 0 C 0
s Papio_kindae.k141_5458022                             63156 13 -    104429 a---c-ctt---t--ct-tttgg
i Papio_kindae.k141_5458022                         C 0 C 0
s Papio_papio.k141_3561084                              12940 13 -     29451 a---c-ctt---t--ct-tttgg
i Papio_papio.k141_3561084                          C 0 C 0
s Papio_ursinus.k141_3762866                            33345 13 +     35859 a---c-ctt---t--ct-tttgg
i Papio_ursinus.k141_3762866                        C 0 C 0
s Perodicticus_ibeanus.k141_117958                       1094 11 -     23713 a---c-cac---t--tt-tca--
i Perodicticus_ibeanus.k141_117958                  C 0 C 0
s Perodicticus_potto.k141_713187                        20391 11 -     27972 a---c-cac---t--tt-tca--
i Perodicticus_potto.k141_713187                    C 0 C 0
s Peromyscus_maniculatus.KI615518.1                   4946016  3 -   8017169 A---T-C----------------
i Peromyscus_maniculatus.KI615518.1                 C 0 I 5
s Piliocolobus_badius.k141_1497351                       1031 13 -      3310 a---c-ctt---t--ct-tttgg
i Piliocolobus_badius.k141_1497351                  C 0 C 0
s Piliocolobus_gordonorum.k141_902470                   20937 13 -     82327 a---c-ctt---t--ct-tttgg
i Piliocolobus_gordonorum.k141_902470               C 0 C 0
s Piliocolobus_kirkii.k141_557609                       17688 13 +     19957 a---c-ctt---t--ct-tttgg
i Piliocolobus_kirkii.k141_557609                   C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1           26735697 13 +  26888534 a---c-ctt---t--ct-tttgg
i Piliocolobus_tephrosceles.PDMG02000036.1          C 0 C 0
s Pithecia_albicans.k141_991845                         39571 13 -     61926 a---t-ctt---t--ct-tttgt
i Pithecia_albicans.k141_991845                     C 0 C 0
s Pithecia_chrysocephala.k141_159118                    21000 13 +     78826 a---t-ctt---t--ct-tttgt
i Pithecia_chrysocephala.k141_159118                C 0 C 0
s Pithecia_hirsuta.k141_1152968                          4951 13 -     15800 a---t-ctt---t--ct-tttgt
i Pithecia_hirsuta.k141_1152968                     C 0 C 0
s Pithecia_mittermeieri.k141_2119203                     8149 13 -     16101 a---t-ctt---t--ct-tttgt
i Pithecia_mittermeieri.k141_2119203                C 0 C 0
s Pithecia_pissinattii.k141_1102319                      1458 13 +      9673 a---t-ctt---t--ct-tttgt
i Pithecia_pissinattii.k141_1102319                 C 0 C 0
s Pithecia_pithecia.tarseq_313                       13470452 13 -  19735023 a---t-ctt---t--ct-tttgt
i Pithecia_pithecia.tarseq_313                      C 0 C 0
s Pithecia_vanzolinii.k141_831006                        9360 13 -     31692 a---t-ctt---t--ct-tttgt
i Pithecia_vanzolinii.k141_831006                   C 0 C 0
s Plecturocebus_bernhardi.k141_959214                   18724 13 +     44506 a---c-ctt---t--ct-tttgt
i Plecturocebus_bernhardi.k141_959214               C 0 C 0
s Plecturocebus_brunneus.k141_498086                    18942 13 +     67491 a---c-ctt---t--ct-tttgt
i Plecturocebus_brunneus.k141_498086                C 0 C 0
s Plecturocebus_caligatus.k141_2539816                   9187 13 -     98129 a---c-ctt---t--ct-tttgt
i Plecturocebus_caligatus.k141_2539816              C 0 C 0
s Plecturocebus_cinerascens.k141_744510                 18787 13 +    147771 a---c-ctt---t--ct-tttgt
i Plecturocebus_cinerascens.k141_744510             C 0 C 0
s Plecturocebus_cupreus.k141_1223294                    19038 13 -     23762 a---c-ctt---t--ct-tttgt
i Plecturocebus_cupreus.k141_1223294                C 0 C 0
s Plecturocebus_dubius.k141_2078842                     18986 13 -     19696 a---c-ctt---t--ct-tttgt
i Plecturocebus_dubius.k141_2078842                 C 0 C 0
s Plecturocebus_grovesi.k141_242819                     18860 13 +    152463 a---c-ctt---t--ct-tttgt
i Plecturocebus_grovesi.k141_242819                 C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                  5617 13 +      8943 a---c-ctt---t--ct-tttgt
i Plecturocebus_hoffmannsi.k141_1595076             C 0 C 0
s Plecturocebus_miltoni.k141_841561                      8577 13 +    134592 a---c-ctt---t--ct-tttgt
i Plecturocebus_miltoni.k141_841561                 C 0 C 0
s Plecturocebus_moloch.k141_890597                      19170 13 -     75465 a---c-ctt---t--ct-tttgt
i Plecturocebus_moloch.k141_890597                  C 0 C 0
s Pongo_abelii.NDHI03003816.1                          183214 13 -    373494 A---C-CTT---T--CT-TCTGG
i Pongo_abelii.NDHI03003816.1                       C 0 C 0
s Pongo_pygmaeus.ctg62                               19803116 13 +  19899266 A---C-CTT---T--CT-TCTGG
i Pongo_pygmaeus.ctg62                              C 0 C 0
s Presbytis_comata.k141_672698                           1267 13 -     15069 a---c-ctt---t--ct-tttgg
i Presbytis_comata.k141_672698                      C 0 C 0
s Presbytis_mitrata.k141_860013                          1402 13 +     14865 a---c-ctt---t--ct-tttgg
i Presbytis_mitrata.k141_860013                     C 0 C 0
s Prolemur_simus.MPIZ01000048.1                       6844631  9 +  12164890 a---c-aat---t---t-tt---
i Prolemur_simus.MPIZ01000048.1                     C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                663901 11 -   2312742 a---c-catt--t--tt-tt---
i Propithecus_coquerelli.NW_012147997.1             C 0 C 0
s Propithecus_coronatus.k141_844990                     30653 11 +     30823 a---c-catt--t--tt-tt---
i Propithecus_coronatus.k141_844990                 C 0 C 0
s Propithecus_diadema.k141_577245                       39094 10 +     52369 a---c-cat---t--tt-tt---
i Propithecus_diadema.k141_577245                   C 0 C 0
s Propithecus_edwardsi.k141_1317105                     31483 10 -     44753 a---c-cat---t--tt-tt---
i Propithecus_edwardsi.k141_1317105                 C 0 C 0
s Propithecus_perrieri.k141_7554                        13405 10 +     27322 a---c-cat---t--tt-tt---
i Propithecus_perrieri.k141_7554                    C 0 C 0
s Propithecus_tattersalli.k141_907138                   13045 11 -     53241 a---c-catt--t--tt-tt---
i Propithecus_tattersalli.k141_907138               C 0 C 0
s Propithecus_verreauxi.k141_158021                     35316 11 -     48185 a---c-catt--t--tt-tt---
i Propithecus_verreauxi.k141_158021                 C 0 C 0
s Psammomys_obesus.NESX01026517.1                       28846  3 +     77221 a---t-a----------------
i Psammomys_obesus.NESX01026517.1                   C 0 I 5
s Pygathrix_cinerea.k141_374971                         25392 13 +     56732 a---c-ctt---t--ct-tttgg
i Pygathrix_cinerea.k141_374971                     C 0 C 0
s Pygathrix_nigripes_b.ctg79                             6801881 13 +   6970761 a---c-ctt---t--ct-tttgg
i Pygathrix_nigripes_b.ctg79                           C 0 C 0
s Pygathrix_nigripes_a.k141_101123                         1274 13 +     18040 a---c-ctt---t--ct-tttgg
i Pygathrix_nigripes_a.k141_101123                    C 0 C 0
s Rattus_norvegicus.chr11                            13910791  3 +  90463843 A---T-C----------------
i Rattus_norvegicus.chr11                           C 0 I 5
s Rhinopithecus_bieti.k119_102124                       11829 13 -     14454 a---c-ctt---t--ct-tttgg
i Rhinopithecus_bieti.k119_102124                   C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1               206373155 13 - 206558726 a---c-ctt---t--ct-tttgg
i Rhinopithecus_roxellana.NC_044549.1               C 0 C 0
s Rhinopithecus_strykeri.ctg4                        44850803 13 -  45163003 a---c-ctt---t--ct-tttgg
i Rhinopithecus_strykeri.ctg4                       C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                 15668595 13 -  43202129 A---C-CTT---T--CC-TTTGT
i Saimiri_boliviensis.NW_024100938.1                C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                     470 13 +     34089 a---c-ctt---t--cc-tttgt
i Saimiri_cassiquiarensis.k141_808270               C 0 C 0
s Saimiri_macrodon.k141_2087127                           401 13 -     60842 a---c-ctt---t--cc-tttgt
i Saimiri_macrodon.k141_2087127                     C 0 C 0
s Saimiri_oerstedii.k141_841116                           470 13 +     67014 a---c-ctt---t--cc-tttgt
i Saimiri_oerstedii.k141_841116                     C 0 C 0
s Saimiri_sciureus.k141_1947592                           470 13 +     60816 a---c-ctt---t--cc-tttgt
i Saimiri_sciureus.k141_1947592                     C 0 C 0
s Saimiri_ustus.k141_1282476                              398 13 -     76454 a---c-ctt---t--cc-tttgt
i Saimiri_ustus.k141_1282476                        C 0 C 0
s Sapajus_apella.ctg10                               17336978 13 -  30362882 a---c-ctt---t--ct-tttgt
i Sapajus_apella.ctg10                              C 0 C 0
s Sapajus_macrocephalus.k141_966464                     16579 13 -     62485 a---c-ctt---t--ct-tttgt
i Sapajus_macrocephalus.k141_966464                 C 0 C 0
s Semnopithecus_entellus.k141_1527475                   23817 13 +     26421 a---c-ctt---t--ct-tttgg
i Semnopithecus_entellus.k141_1527475               C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                   4279 13 +     20762 a---c-ctt---t--ct-tttgg
i Semnopithecus_hypoleucos.k141_761524              C 0 C 0
s Semnopithecus_johnii.k141_1351450                     38012 13 +     40653 a---c-ctt---t--ct-tttgg
i Semnopithecus_johnii.k141_1351450                 C 0 C 0
s Semnopithecus_priam.k141_198153                        8571 13 -     12194 a---c-ctt---t--ct-tttgg
i Semnopithecus_priam.k141_198153                   C 0 C 0
s Semnopithecus_schistaceus.k141_653647                 21990 13 -     27512 a---c-ctt---t--ct-tttgg
i Semnopithecus_schistaceus.k141_653647             C 0 C 0
s Semnopithecus_vetulus.k141_642050                     31011 13 -     33692 a---c-ctt---t--ct-tttgg
i Semnopithecus_vetulus.k141_642050                 C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332               94128  3 -    120886 A---T-C----------------
i Sigmodon_hispidus.SigHis_scaffold_11332           C 0 I 5
s Spermophilus_dauricus.KZ294190.1                    2235963  4 +   2842873 a---cct----------------
i Spermophilus_dauricus.KZ294190.1                  C 0 I 2
s Symphalangus_syndactylus.tarseq_24                    10928 13 -  13920577 a---c-ctt---t--tt-tctgg
i Symphalangus_syndactylus.tarseq_24                I 21 C 0
s Tarsius_lariang.k141_609102                           22727 11 +     42269 a---c-cct---t--ct-ttt--
i Tarsius_lariang.k141_609102                       C 0 C 0
s Tarsius_wallacei.k141_48636                           56035 11 +     65473 a---c-cct---t--ct-ttt--
i Tarsius_wallacei.k141_48636                       C 0 C 0
s Theropithecus_gelada.CM009951.1                   194003313 13 - 194193292 a---c-ctt---t--ct-tttgg
i Theropithecus_gelada.CM009951.1                   C 0 C 0
s Trachypithecus_auratus.k141_738098                    22389 13 +     38948 a---c-ctt---t--ct-tttgg
i Trachypithecus_auratus.k141_738098                C 0 C 0
s Trachypithecus_crepusculus.k141_1588528               16116 13 -     32910 a---c-ctt---t--ct-tttgg
i Trachypithecus_crepusculus.k141_1588528           C 0 C 0
s Trachypithecus_cristatus.k141_27198                   22014 13 +     24652 a---c-ctt---t--ct-tttgg
i Trachypithecus_cristatus.k141_27198               C 0 C 0
s Trachypithecus_francoisi.k141_1178450                   899 13 -      3559 a---c-ctt---t--ct-tttgg
i Trachypithecus_francoisi.k141_1178450             C 0 C 0
s Trachypithecus_geei.k141_670367                       38836 13 -     54611 a---c-ctt---t--ct-tttgg
i Trachypithecus_geei.k141_670367                   C 0 I 2
s Trachypithecus_germaini.k141_809503                   14837 13 +     17312 a---c-ctt---t--ct-tttgg
i Trachypithecus_germaini.k141_809503               C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                22207 13 -     25040 a---c-ctt---t--ct-tttgg
i Trachypithecus_hatinhensis.k141_357672            C 0 C 0
s Trachypithecus_laotum.k141_171445                       873 13 +      3528 a---c-ctt---t--ct-tttgg
i Trachypithecus_laotum.k141_171445                 C 0 C 0
s Trachypithecus_leucocephalus.k141_283605              47235 13 +     51589 a---c-ctt---t--ct-tttgg
i Trachypithecus_leucocephalus.k141_283605          C 0 C 0
s Trachypithecus_melamera.k141_238507                   10403 13 +     14732 a---c-ctt---t--ct-tttgg
i Trachypithecus_melamera.k141_238507               C 0 C 0
s Trachypithecus_obscurus.k141_1115109                    881 13 -     28054 a---c-ctt---t--ct-tttgg
i Trachypithecus_obscurus.k141_1115109              C 0 C 0
s Trachypithecus_phayrei.ctg3                        44655676 13 -  44834318 a---c-ctt---t--ct-tttgg
i Trachypithecus_phayrei.ctg3                       C 0 C 0
s Trachypithecus_pileatus.k141_469329                     684 13 +      3372 a---c-ctt---t--ct-tttgg
i Trachypithecus_pileatus.k141_469329               C 0 I 2
s Tupaia_chinensis.KB320831.1                         2785947  3 -   3938065 a---c-c----------------
i Tupaia_chinensis.KB320831.1                       C 0 I 3
s Tupaia_tana.TupTan_flattened_line_251551               4340  3 -      5019 a---c-c----------------
i Tupaia_tana.TupTan_flattened_line_251551          C 0 I 3
s Varecia_rubra.k141_432109                              1569  9 -     20643 a---c-aat---t---t-tt---
i Varecia_rubra.k141_432109                         C 0 C 0
s Varecia_variegata.k141_775891                         21114  9 -     33872 a---c-aat---t---t-tt---
i Varecia_variegata.k141_775891                     C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                   123136  4 -    134049 a---tcg----------------
i Xerus_inauris.XerIna_scaffold_7898                C 0 I 2
e Nomascus_siki_b.tarseq_80                         20456  0 -  18771707 C
e Nomascus_annamensis.k141_745421                         374  0 -      4569 C
e Nomascus_gabriellae.k141_1350167                        785  0 +      9928 C

a score=0.000000
s hg38.chr4_GL000008v2_random                            7939 55 +    209709 A-TA-TG-T-GTGTG-AGGAAA---GAGTACC----T-ACA-A-A-C-T-ACC---CTTTT--A--GT--T--AAATGCCATAT
s Acomys_cahirinus.AcoCah_scaffold_1625                108346 46 -    189883 -----------C-TG-TGGCAA---GTTTATC----TGAA--A-A-C-G-ACC---CTT----T--TACCA--AAATGCAG-AT
i Acomys_cahirinus.AcoCah_scaffold_1625             I 5 C 0
s Allenopithecus_nigroviridis.k141_3103707              58962 54 +     61638 a-ta-tg-t-gtgtg-aggaaa---gagtacc----t-aca-a-a-c-t-acc---ctaa---a--gt--a--aaatgccaaat
i Allenopithecus_nigroviridis.k141_3103707          C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                    50770 54 +     53391 a-ta-tg-t-gtgtg-aggaaa---gagtacc----t-aca-a-a-c-t-acc---ctaa---a--gt--a--aaatgccaaat
i Allochrocebus_lhoesti.k141_4825038                C 0 C 0
s Allochrocebus_preussi.k141_1202907                     1494 54 +     72529 a-ta-tg-t-gtgtg-aggaaa---gagtacc----t-aca-a-a-c-t-acc---ctaa---a--gt--a--aaatgccaaat
i Allochrocebus_preussi.k141_1202907                C 0 C 0
s Allochrocebus_solatus.k141_787528                      1071 54 +      3797 a-ta-tg-t-gtgtg-aggaaa---gagtacc----t-aca-a-a-c-t-acc---ctaa---a--gt--a--aaatgccaaat
i Allochrocebus_solatus.k141_787528                 C 0 C 0
s Alouatta_belzebul.k141_1818029                         6155 55 -     18050 g-ta-ta-g-gtatg-aggaaa---gagtacc----t-aca-a-a-c-c-acc---ccttt--a--gc--a--aaatgccaaat
i Alouatta_belzebul.k141_1818029                    C 0 C 0
s Alouatta_caraya.k141_5460                              7272 55 -     11521 g-ta-ta-g-gtatg-aggaaa---gagtacc----t-aca-a-a-c-c-acc---ccttt--a--gc--a--aaatgccaaat
i Alouatta_caraya.k141_5460                         C 0 C 0
s Alouatta_discolor.k141_811576                          6830 55 -     21359 g-ta-ta-g-gtatg-aggaaa---gagtacc----t-aca-a-a-c-c-acc---ccttt--a--gc--a--aaatgccaaat
i Alouatta_discolor.k141_811576                     C 0 C 0
s Alouatta_juara.k141_1856473                            5213 55 +      7227 g-ta-ta-g-gtatg-aggaaa---gagtacc----t-aca-a-a-c-c-acc---ccttt--a--gc--a--aaatgccaaat
i Alouatta_juara.k141_1856473                       C 0 C 0
s Alouatta_macconnelli.k141_1331706                      6128 55 -     10438 g-tg-ta-g-gtatg-aggaaa---gagtacc----t-aca-a-a-c-c-acc---ccttt--a--gc--a--aaatgccaaat
i Alouatta_macconnelli.k141_1331706                 C 0 C 0
s Alouatta_nigerrima.k141_2718643                        2782 55 +      7047 g-ta-ta-g-gtatg-aggaaa---gagtacc----t-aca-a-a-c-c-acc---ccttt--a--gc--a--aaatgccaaat
i Alouatta_nigerrima.k141_2718643                   C 0 C 0
s Alouatta_palliata.k141_1316127                         6066 55 +     10410 g-ta-ta-g-gtatg-aggaaa---gagtacc----t-aca-a-a-c-c-acc---ccttt--a--gc--a--aaatgccaaat
i Alouatta_palliata.k141_1316127                    C 0 C 0
s Alouatta_puruensis.k141_390786                         7343 55 -      7615 g-ta-ta-g-gtatg-aggaaa---gagtacc----t-aca-a-a-c-c-acc---ccttt--a--gc--a--aaatgccaaat
i Alouatta_puruensis.k141_390786                    C 0 C 0
s Alouatta_seniculus.k141_990213                         2787 55 +      6429 g-ta-ta-g-gtatg-aggaaa---gagtacc----t-aca-a-a-c-c-acc---ccttt--a--gc--a--aaatgccaaat
i Alouatta_seniculus.k141_990213                    C 0 C 0
s Aotus_azarae.k141_3170768                             58470 55 +     78111 g-ta-tg-g-gtatg-aggaaa---gagtacc----t-aca-a-a-c-c-act---ccttt--a--gc--a--aaatgccaaat
i Aotus_azarae.k141_3170768                         C 0 C 0
s Aotus_griseimembra.k141_3275623                        1401 55 +     22701 g-ta-tg-g-gtatg-aggaaa---gagtacc----t-aca-a-a-c-c-act---ccttt--a--gc--a--aaatgccaaat
i Aotus_griseimembra.k141_3275623                   C 0 C 0
s Aotus_nancymaae.KZ196176.1                          5745361 55 +   9889416 G-TA-TG-G-GTATG-AGGAAA---GAGTACC----T-ACA-A-A-C-C-ACT---CCTTT--A--GC--A--AAATGCcaaat
i Aotus_nancymaae.KZ196176.1                        C 0 C 0
s Aotus_trivirgatus.k141_1740727                         1953 55 -    104377 g-ta-tg-g-gtatg-aggaaa---gagtacc----t-aca-a-a-c-c-acc---ccttt--a--gc--a--aaatgccaaat
i Aotus_trivirgatus.k141_1740727                    C 0 C 0
s Aotus_vociferans.k141_718647                           1953 55 +     23246 g-ta-tg-g-gtatg-aggaaa---gagtacc----t-aca-a-a-c-c-acc---ccttt--a--gc--a--aaatgccaaat
i Aotus_vociferans.k141_718647                      C 0 C 0
s Arctocebus_calabarensis.k141_1161114                  14257 54 +     17483 ---t-tc-t-tc-ca-tgataa---gagcacc----t-aga-a-aac-t-aa-tcc-tttc--a--gc--a--aaatgtcaaac
i Arctocebus_calabarensis.k141_1161114              C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                         9535214 55 +  39197703 g-ta-tg-g-gtatg-aggaga---gagtacc----t-aca-a-a-c-c-acc---ccttt--a--gc--a--aaatgccaaat
i Ateles_geoffroyi_b.tarseq_2582                       C 0 C 0
s Ateles_belzebuth.k141_1348307                         56502 55 +     85812 g-ta-tg-g-gtatg-aggaga---gagtacg----t-aca-a-a-c-c-acc---ccttt--g--gc--a--aaatgccaaat
i Ateles_belzebuth.k141_1348307                     C 0 C 0
s Ateles_chamek.k141_1072810                             7499 55 +     89302 g-ta-tg-g-gtatg-aggaga---gagtacg----t-aca-a-a-c-c-acc---ccttt--a--gc--a--aaatgccaaat
i Ateles_chamek.k141_1072810                        C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                         12008 55 -     58268 g-ta-tg-g-gtatg-aggaga---gagtacc----t-aca-a-a-c-c-acc---ccttt--a--gc--a--aaatgccaaat
i Ateles_geoffroyi_a.k141_1300742                     C 0 C 0
s Ateles_marginatus.k141_899112                         59996 55 +    119057 g-ta-tg-g-gtatg-aggaga---gagtacg----t-aca-a-a-c-c-acc---ccttt--a--gc--a--aaatgccaaat
i Ateles_marginatus.k141_899112                     C 0 C 0
s Ateles_paniscus.k141_1631200                           1947 55 -     25888 g-ta-tg-g-gtatg-aggaga---gagtacg----t-aca-a-a-c-c-acc---ccttt--a--gc--a--aaatgccaaat
i Ateles_paniscus.k141_1631200                      C 0 C 0
s Avahi_laniger.k141_2840928                             2847 20 -     16375 --------------------------------------------------------ctttc--a--gc--a--aaatgtcaaat
i Avahi_laniger.k141_2840928                        I 27 C 0
s Avahi_peyrierasi.k141_767228                           8790 30 -      9688 ---ttta-t-tt-tg-tggcaa---gagcacc----t-aaa-a-a-c-t-----------------------------------
i Avahi_peyrierasi.k141_767228                      C 0 I 20
s Cacajao_ayresi.k141_724503                           109871 55 -    171031 g-ta-tg-g-gtatg-aggaaa---gagtacc----t-aca-a-a-c-c-atc---ccttt--a--gc--a--aaatgccaaat
i Cacajao_ayresi.k141_724503                        C 0 C 0
s Cacajao_calvus.k141_96166                              8897 55 +    125063 g-ta-tg-g-gtatg-aggaaa---gagtacc----t-aca-a-a-c-c-atc---ccttt--a--gc--a--aaatgccaaat
i Cacajao_calvus.k141_96166                         C 0 C 0
s Cacajao_hosomi.k141_303789                            10945 55 -    216513 g-ta-tg-g-gtatg-aggaaa---gagtacc----t-aca-a-a-c-c-atc---ccttt--a--gc--a--aaatgccaaat
i Cacajao_hosomi.k141_303789                        C 0 C 0
s Cacajao_melanocephalus.k141_1160263                    3484 55 -    134917 g-ta-tg-g-gtatg-aggaaa---gagtacc----t-aca-a-a-c-c-atc---ccttt--a--gc--a--aaatgccaaat
i Cacajao_melanocephalus.k141_1160263               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_647363               251 25 +      1887 --tt-ta-a-ct-tt-tggcaa---aagcacc----t-aa--------------------------------------------
i Capromys_pilorides.CapPil_scaffold_647363         C 0 I 21
s Carlito_syrichta.NW_007248099.1                      305253 54 +    345090 --TG-AG-G-GAAAA-AGAGAA---GAGCACC----T-AAA-A-A-T-T-ACC---CTTTC--A--GC--A--AAATGCCAAac
i Carlito_syrichta.NW_007248099.1                   C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037               26806 54 +     33760 --tt-ta-t-tt-ttgtggcca---gattact----t-ga--aca-c-t-cct---ctt----t--ta--atgaaatgccatat
i Castor_canadensis.CasCan_scaffold_47037           I 3 C 0
s Cavia_aperea.AVPZ01000278.1                        15783547 35 -  24422027 --ct-ta-a-gt-tt-tatcaa---gaggccc----t--a--a-a-a-atagt---a------t--t-----------------
i Cavia_aperea.AVPZ01000278.1                       I 3 I 12
s Cavia_porcellus.DS562889.1                         15795481 35 -  24440124 --ct-ta-a-gt-tt-tatcaa---gaggccc----t--a--a-a-a-atagt---a------t--t-----------------
i Cavia_porcellus.DS562889.1                        I 3 I 12
s Cavia_tschudii.CavTsc_scaffold_488                   173672 35 +    436027 --ct-ta-a-gt-tt-tatcaa---gaggccc----t--a--a-a-a-atagt---a------t--t-----------------
i Cavia_tschudii.CavTsc_scaffold_488                I 3 I 12
s Cebus_albifrons.Contig22                           18886682 55 -  29618158 g-ta-tg-g-gtatg-aggaaa---gagtacc----t-aca-a-a-c-c-acc---ccttt--a--gc--a--aaatgccaaat
i Cebus_albifrons.Contig22                          C 0 C 0
s Cebus_olivaceus.k141_93739                             4228 55 -     26817 g-ta-tg-g-gtatg-aggaaa---gagtacc----t-aca-a-a-c-c-acc---ccttt--a--gc--a--aaatgccaaat
i Cebus_olivaceus.k141_93739                        C 0 C 0
s Cebus_unicolor.k141_239009                             8468 55 +     25043 g-ta-tg-g-gtatg-aggaaa---gagtacc----t-aca-a-a-c-c-acc---ccttt--a--gc--a--aaatgccaaat
i Cebus_unicolor.k141_239009                        C 0 C 0
s Cephalopachus_bancanus.k141_702587                     4318 25 +     21754 ----------------------------------------------t-t-acc---ctttc--a--gc--a--aaatgccaaac
i Cephalopachus_bancanus.k141_702587                I 28 C 0
s Cercocebus_atys.KQ010443.1                          6550760 52 +   6739814 a-ta-tg-t-gtGTG-AGGAAA---GA--ACC----T-ACA-A-A-C-T-ACC---CTAA---A--GT--A--AAATgccaaat
i Cercocebus_atys.KQ010443.1                        C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                  52237 52 -     54931 a-ta-tg-t-gtgtg-aggaaa---ga--acc----t-aca-a-a-c-t-acc---ctaa---a--gt--a--aaatgccaaat
i Cercocebus_chrysogaster.k141_2951608              C 0 C 0
s Cercocebus_lunulatus.k141_3387186                     17221 52 -     19697 a-ta-tg-t-gtgtg-aggaaa---ga--acc----t-aca-a-a-c-t-act---ctaa---a--gt--a--aaatgccaaat
i Cercocebus_lunulatus.k141_3387186                 C 0 C 0
s Cercocebus_torquatus.k141_3969582                     54752 52 -    107033 a-ta-tg-t-gtgtg-aggaaa---ga--acc----t-aca-a-a-c-t-acc---ctaa---a--gt--a--aaatgccaaat
i Cercocebus_torquatus.k141_3969582                 C 0 C 0
s Cercopithecus_ascanius.k141_3371259                    1193 54 -      3853 g-ta-tg-t-gtgtg-aggaaa---gagtacc----t-aca-a-a-c-t-acc---ctaa---a--gt--a--aaatgccaaat
i Cercopithecus_ascanius.k141_3371259               C 0 C 0
s Cercopithecus_cephus.k141_598190                      25125 54 +     30494 a-ta-tg-t-gtgtg-aggaaa---gagtacc----t-aca-a-a-c-t-acc---ctaa---a--gt--a--aaatgccaaat
i Cercopithecus_cephus.k141_598190                  C 0 C 0
s Cercopithecus_diana.k141_1490386                       1148 54 -      4022 a-ta-tg-t-gtgtg-aggaaa---gagtacc----t-aca-a-a-c-t-acc---ctaa---a--gt--a--aaatgccaaat
i Cercopithecus_diana.k141_1490386                  C 0 C 0
s Cercopithecus_hamlyni.k141_381099                      1038 54 -      3505 a-ta-tg-t-gtgtg-aggaaa---gagtacc----t-aca-a-a-c-t-acc---ctaa---a--gt--a--aaatgccagat
i Cercopithecus_hamlyni.k141_381099                 C 0 C 0
s Cercopithecus_lowei.k141_623764                       19849 54 +     35983 a-ta-tg-t-gtgtg-aggaaa---gagtacc----t-aca-a-a-c-t-acc---ctaa---a--gt--a--aaatgccaaat
i Cercopithecus_lowei.k141_623764                   C 0 C 0
s Cercopithecus_albogularis.ctg51                          11985625 54 +  12117833 a-ta-tg-t-gtgtg-aggaaa---gagtacc----t-aca-a-a-c-t-acc---ctaa---a--gt--a--aaatgccaaat
i Cercopithecus_albogularis.ctg51                         C 0 C 0
s Cercopithecus_mona.ctg12                           46473121 54 +  46592721 a-ta-tg-t-gtgtg-aggaaa---gagtacc----t-aca-a-a-c-t-acc---ctaa---a--gt--a--aaatgccaaat
i Cercopithecus_mona.ctg12                          C 0 C 0
s Cercopithecus_neglectus.k141_1474992                  30948 54 +     33420 a-ta-tg-t-gtgtg-aggaaa---gagtacc----t-aca-a-a-c-t-acc---ctaa---a--gt--a--aaatgccaaat
i Cercopithecus_neglectus.k141_1474992              C 0 C 0
s Cercopithecus_nictitans.k141_675209                     984 54 -      3443 a-ta-tg-t-gtgtg-aggaaa---gagtacc----t-aca-a-a-c-t-acc---ctaa---a--gt--a--aaatgccaaat
i Cercopithecus_nictitans.k141_675209               C 0 C 0
s Cercopithecus_petaurista.k141_2037881                  1975 54 -      4669 a-ta-tg-t-gtgtg-aggaaa---gagtacc----t-aga-a-a-c-t-acc---ctaa---a--gt--a--aaatgccaaat
i Cercopithecus_petaurista.k141_2037881             C 0 C 0
s Cercopithecus_pogonias.k141_1977419                    1779 54 -      4411 a-ta-tg-t-gtgtg-aggaaa---gagtacc----t-aca-a-a-c-t-acc---ctaa---a--gt--a--aaatgccaaat
i Cercopithecus_pogonias.k141_1977419               C 0 C 0
s Cercopithecus_roloway.k141_3372345                     1299 54 -      4205 a-ta-tg-t-gtgtg-aggaaa---gagtacc----t-aca-a-a-c-t-acc---ctaa---a--gt--a--aaatgccaaat
i Cercopithecus_roloway.k141_3372345                C 0 C 0
s Cheirogaleus_major.k141_1157592                       55160 29 -     68416 ---t-tc-t-tt-tg-tgccaa---gagcacc----t-aaa-a-a-c-t-----------------------------------
i Cheirogaleus_major.k141_1157592                   C 0 I 20
s Cheirogaleus_medius.k141_133808                        4210 29 +     13308 ---t-tc-t-tt-tg-tggcaa---gaccacc----t-gaa-a-a-c-t-----------------------------------
i Cheirogaleus_medius.k141_133808                   C 0 I 20
s Cheracebus_lucifer.k141_619653                         1481 55 -     18223 g-ta-tg-g-gtatg-aggaaa---gattacc----t-aca-a-a-t-c-acc---ccttt--a--gc--a--aaatgccaaat
i Cheracebus_lucifer.k141_619653                    C 0 C 0
s Cheracebus_lugens.k141_203936                         18504 55 +     25473 g-ta-tg-g-gtatg-aggaaa---gattacc----t-aca-a-a-t-c-acc---ccttt--a--gc--a--aaatgccaaat
i Cheracebus_lugens.k141_203936                     C 0 C 0
s Cheracebus_regulus.k141_2128895                       37543 55 +     57117 g-ta-tg-g-gtatg-aggaaa---gattacc----t-aca-a-a-t-c-acc---ccttt--a--gc--a--aaatgccaaat
i Cheracebus_regulus.k141_2128895                   C 0 C 0
s Cheracebus_torquatus.k141_315545                      42218 55 +     54541 g-ta-tg-g-gtatg-aggaaa---gattacc----t-aca-a-a-t-c-acc---ccttt--a--gc--a--aaatgccaaat
i Cheracebus_torquatus.k141_315545                  C 0 C 0
s Chinchilla_lanigera.JH721867.1                     15957672 35 +  43084221 --tt-ta-a-ct-tt-tagcaa---taacacc----t-aa--a-a-a-t-act---a------t--t-----------------
i Chinchilla_lanigera.JH721867.1                    C 0 I 14
s Chiropotes_israelita.k141_1189915                     67092 55 +    196370 g-ta-tg-g-gtatg-aggaaa---gagtacc----t-aca-a-a-c-c-atc---ccttt--a--gc--a--aaatgccaaat
i Chiropotes_israelita.k141_1189915                 C 0 C 0
s Chiropotes_sagulatus.k141_773804                      11266 55 +     40510 g-ta-tg-g-gtatg-aggaaa---gagtacc----t-aca-a-a-c-c-atc---ccttt--a--gc--a--aaatgccaaat
i Chiropotes_sagulatus.k141_773804                  C 0 C 0
s Chlorocebus_aethiops.ctg22                         15134579 54 -  15256731 a-ta-tg-t-gtgtg-aggaaa---gagtacc----t-aca-a-a-c-t-acc---ctaa---a--gt--a--aaatgccaaat
i Chlorocebus_aethiops.ctg22                        C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                  29625 54 -     53260 a-ta-tg-t-gtgtg-aggaaa---gagtacc----t-aca-a-a-c-t-acc---ctaa---a--gt--a--aaatgccaaat
i Chlorocebus_pygerythrus.k141_1486215              C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                    101140073 54 + 101219884 a-ta-tg-t-gtGTG-AGGAAA---GAGTACC----T-ACA-A-A-C-T-ACC---CTAA---A--GT--A--AAATgccaaat
i Chlorocebus_sabaeus.CM001963.2                    C 0 C 0
s Colobus_angolensis.KN985967.1                      10878655 54 +  10971483 a-ta-tg-t-gtGTG-AGGAAA---CAGTACC----T-ACA-A-A-C-T-ACC---CTAA---A--GT--A--AAATgccaaat
i Colobus_angolensis.KN985967.1                     C 0 C 0
s Colobus_guereza.LG08                              147659814 54 + 156195979 a-ta-tg-t-gtgtg-aggaaa---cagtacc----t-aca-a-a-c-t-acc---ctaa---a--gt--a--aaatgccaaat
i Colobus_guereza.LG08                              C 0 C 0
s Colobus_polykomos.k141_1406057                        11799 54 +     23629 a-ta-tg-t-gtgtg-aggaac---cagtacc----t-aca-a-a-c-t-acc---ctaa---a--gt--a--aaatgccaaat
i Colobus_polykomos.k141_1406057                    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949             273782 46 -    399297 -----------t-tg-tggcac---aattatc----tgaa--a-a-c-t-act----tt----t--tacca--aaatgccagat
i Cricetomys_gambianus.CriGam_scaffold_949          I 5 C 0
s Cricetulus_griseus.LT883672.1                      53025258 47 +  72327488 -----------t-tg-tggcaa---gattatc----tgaa--a-a-t-t-act---ctt----c--catcc--aaatcccggat
i Cricetulus_griseus.LT883672.1                     I 5 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447              204501 22 -    956709 --TT-TA-G-TA-TT-TTGCAA---GAAGACC----------------------------------------------------
i Ctenodactylus_gundi.CteGun_scaffold_447           C 0 I 18
s Ctenomys_sociabilis.CteSoc_scaffold_19489             26408 25 -     67205 --ct-ta-a-ct-tt-tggcaa---aagcacc----t-aa--------------------------------------------
i Ctenomys_sociabilis.CteSoc_scaffold_19489         C 0 I 22
s Cuniculus_paca.CunPac_flattened_line_16637            14425 27 +     26546 --tt-ta-a-tt-tt-tagcaa---gagaccc----acaa--a-----------------------------------------
i Cuniculus_paca.CunPac_flattened_line_16637        C 0 I 21
s Dasyprocta_punctata.DasPun_flattened_line_634         55902 25 -    236241 --tt-ta-a-ct-tt-tagcaa---gagaccc----t--a--a-----------------------------------------
i Dasyprocta_punctata.DasPun_flattened_line_634     C 0 I 19
s Daubentonia_madagascariensis.ctg11                 16841017 52 +  31942871 ---t-tc-t-tt-tg-tggcaa---gagcacc----t-aaa-a-g-c-t-act---atttt--a--gc--a--aaatgtcaaat
i Daubentonia_madagascariensis.ctg11                C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102            33060 34 -     73477 --tt-ta-t-gt-tt-tagcaa---gagaccc----t--a--a-a-a-a-agt---t------t--t-----------------
i Dolichotis_patagonum.DolPat_scaffold_14102        I 3 I 12
s Ellobius_lutescens.LOEQ01003611.1                    235444 47 -    369425 -----------t-tg-tagcaa---gataatc----tgaa--a-a-c-t-act---ctt----t--tacca--aaatggcaaat
i Ellobius_lutescens.LOEQ01003611.1                 I 5 C 0
s Ellobius_talpinus.LOJH01090055.1                       2453 47 -      7838 -----------t-tg-tggcaa---gataatc----tgaa--a-a-c-t-act---ctt----t--tacca--aaatgacaaat
i Ellobius_talpinus.LOJH01090055.1                  I 5 C 0
s Erythrocebus_patas.Contig8                         48766758 54 -  48907691 a-ta-tg-t-gtgtg-aggaaa---gagtacc----t-aca-a-a-c-t-acc---ctaa---a--gt--a--aaatgccaaat
i Erythrocebus_patas.Contig8                        C 0 C 0
s Eulemur_albifrons.k141_715837                          1231 29 +     13586 ---t-tc-t-tt-tg-tgtcaa---gagcacc----t-aaa-a-a-c-t-----------------------------------
i Eulemur_albifrons.k141_715837                     C 0 I 20
s Eulemur_collaris.k141_311830                           1168 29 -      6809 ---t-tc-t-tt-tg-tgtcaa---gagcacc----t-aaa-a-a-c-t-----------------------------------
i Eulemur_collaris.k141_311830                      C 0 I 20
s Eulemur_coronatus.k141_3240342                         7638 29 +     36558 ---t-tc-t-tt-tg-tgtcaa---gagcacc----t-aaa-a-a-c-t-----------------------------------
i Eulemur_coronatus.k141_3240342                    C 0 I 20
s Eulemur_flavifrons.k141_903901                         3955 29 +     60246 ---t-tc-t-tt-tg-tgtcaa---gagcacc----t-aaa-a-a-c-t-----------------------------------
i Eulemur_flavifrons.k141_903901                    C 0 I 20
s Eulemur_fulvus.k141_653297                             7443 29 +    109717 ---t-tc-t-tt-tg-tgtcaa---gagcacc----t-aaa-a-c-c-t-----------------------------------
i Eulemur_fulvus.k141_653297                        C 0 I 20
s Eulemur_macaco.k141_1341545                           11817 29 +     16540 ---t-tc-t-tt-tg-tgtcaa---gagcacc----t-aaa-a-a-c-t-----------------------------------
i Eulemur_macaco.k141_1341545                       C 0 I 20
s Eulemur_mongoz.k141_825972                            12094 29 +     27497 ---t-tc-t-tt-tg-tgtcaa---gagcact----t-aaa-a-a-c-t-----------------------------------
i Eulemur_mongoz.k141_825972                        C 0 I 20
s Eulemur_rubriventer.k141_411740                       14550 29 +     26808 ---t-tc-t-tt-tg-tgtcaa---gagcacc----t-aaa-a-a-c-t-----------------------------------
i Eulemur_rubriventer.k141_411740                   C 0 I 20
s Eulemur_rufus.k141_1620292                            29284 29 +     46535 ---t-tc-t-tt-tg-tgtcaa---gagcacc----t-aaa-a-a-c-t-----------------------------------
i Eulemur_rufus.k141_1620292                        C 0 I 20
s Eulemur_sanfordi.k141_186399                          12007 29 -     29447 ---t-tc-t-tt-tg-tgtcaa---gagcacc----t-aaa-a-a-c-t-----------------------------------
i Eulemur_sanfordi.k141_186399                      C 0 I 20
s Fukomys_damarensis.KN123630.1                      13889227 40 -  19261668 --tt-ta-a-tt-tt-tggcaa---gaacacgtaggt-aa--a-a-act-act---c------c--a-----------------
i Fukomys_damarensis.KN123630.1                     C 0 I 12
s Galago_moholi.ctg555                                 207343 20 -    847004 ----------------------------cagc----a-aca-a-aaa-t-aa-----tttt--a--------------------
i Galago_moholi.ctg555                              I 9 I 68
s Galago_senegalensis.k141_964197                        9723 20 -     43889 ----------------------------cagc----a-aca-a-aaa-t-aa-----tttt--a--------------------
i Galago_senegalensis.k141_964197                   I 9 I 68
s Galagoides_demidoff.k141_1769638                       6743 20 +     27357 ----------------------------cagt----a-ata-a-aaa-t-aa-----tttt--a--------------------
i Galagoides_demidoff.k141_1769638                  I 9 I 68
s Galeopterus_variegatus.GalVar_scaffold_354           152501 30 +    324696 ------------------------------cc----t-aaa-a-t-c-c-act---ctt----a--gc--a--aaatg-caaat
i Galeopterus_variegatus.GalVar_scaffold_354        N 0 C 0
s Gorilla_beringei.k141_111300                           1331 55 -     14630 a-ta-tg-t-gtgtg-aggaaa---gggtacc----t-aca-a-a-c-t-acc---ctttt--a--gt--a--aaatgccaaat
i Gorilla_beringei.k141_111300                      C 0 C 0
s Gorilla_gorilla.LT578340.1                        119648429 55 - 195582420 a-ta-tg-t-gtgtg-aggaaa---gggtacc----t-aca-a-a-c-t-acc---ctttt--a--gt--a--aaatgccaaat
i Gorilla_gorilla.LT578340.1                        C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493               73475 51 +    118900 --ct-tatt-tt-tt-tagtaa---gaacacc----t-aa--a-g-c-t-att---ctt----ttaac--a--aaatgtcag--
i Graphiurus_murinus.GraMur_scaffold_4493           C 0 I 2
s Hapalemur_alaotrensis.k141_1198205                     1778 29 +      3980 ---t-tc-t-tt-tg-tggcaa---gagcacc----t-aga-a-a-c-c-----------------------------------
i Hapalemur_alaotrensis.k141_1198205                C 0 I 20
s Hapalemur_gilberti.k141_97962                         24256 29 +     26611 ---t-tc-t-tt-tg-tggcaa---gagcacc----t-aga-a-a-c-t-----------------------------------
i Hapalemur_gilberti.k141_97962                     C 0 I 20
s Hapalemur_griseus.k141_1387522                         1710 29 +     56096 ---t-tc-t-tt-tg-tggcaa---gagcacc----t-aga-a-a-c-t-----------------------------------
i Hapalemur_griseus.k141_1387522                    C 0 I 20
s Hapalemur_meridionalis.k141_186231                    24983 29 -     42470 ---t-tc-t-tt-tg-tggcaa---gagcacc----t-aga-a-a-c-t-----------------------------------
i Hapalemur_meridionalis.k141_186231                C 0 I 20
s Hapalemur_occidentalis.k141_797938                    41583 29 -     54384 ---t-tc-t-tt-tg-tggcaa---gagcacc----t-aga-a-a-c-c-----------------------------------
i Hapalemur_occidentalis.k141_797938                C 0 I 20
s Heterocephalus_glaber.JH602058.1                    2547112 38 +  31725842 --tt-ta-a-tt-tt-tgtcaa---gaccccg----t-aa--a-a-act-act---c----ttt--A-----------------
i Heterocephalus_glaber.JH602058.1                  C 0 I 117
s Hoolock_leuconedys.ctg2405                               11368 55 -     15084 a-ta-tg-t-gtgtg-aggaaa---tagtacc----c-aca-a-a-c-t-acc---ctttt--a--gt--a--aaatgccaaat
i Hoolock_leuconedys.ctg2405                           C 0 I 1270
s Hylobates_abbotti.k141_493872                          1166 29 +      5897 ---------------------------------------ca-a-a-c-t-acc---ctttt--a--gt--a--aaatgccaaat
i Hylobates_abbotti.k141_493872                     N 0 C 0
s Hylobates_agilis.k141_961056                          20937 29 -     21634 ---------------------------------------ca-a-a-c-t-acc---ctttt--a--gt--a--aaatgccaaat
i Hylobates_agilis.k141_961056                      N 0 I 2
s Hylobates_klossii.k141_466549                          7624 29 +     11537 ---------------------------------------ca-a-a-c-t-aca---ctttt--a--gt--a--aaatgccaaat
i Hylobates_klossii.k141_466549                     N 0 C 0
s Hylobates_muelleri.k141_1133650                         601 29 -      2775 ---------------------------------------ca-a-a-c-t-acc---ctttt--a--gt--a--aaatgccaaat
i Hylobates_muelleri.k141_1133650                   N 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                 2208 52 +     22540 --tt-ta-a-ct-ttttagcga---gagcacc----t-aa--a-atc-t-aat---ctt----t--aa--a--aatacccagat
i Hystrix_cristata.HysCri_scaffold_50788            C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1               7122043 53 +  13083262 --at-tattgtt-tg-tggcaa---gagcatc----t-aa-aa-a-c-t-acg---ctt----a--ac--a--aaatatcagat
i Ictidomys_tridecemlineatus.JH393315.1             I 2 C 0
s Indri_indri.k141_3334527                               8219 29 +      9207 ---t-tc-t-tt-tg-tggcaa---gagcacc----t-aaa-a-a-c-t-----------------------------------
i Indri_indri.k141_3334527                          C 0 I 20
s Lagothrix_lagothricha.k141_12968                      46057 55 -    147782 g-ta-tg-g-gtatg-aggaga---gagtacc----t-aca-a-a-c-c-acc---ccttt--a--gc--a--aaatgccaaat
i Lagothrix_lagothricha.k141_12968                  C 0 C 0
s Lemur_catta.scaffold_1                            258403259 29 - 285822530 ---t-tc-t-tt-tg-tggcaa---gagcacc----t-aga-a-a-c-c-----------------------------------
i Lemur_catta.scaffold_1                            C 0 I 20
s Lepilemur_ankaranensis.k141_884009                    20154 29 +     39228 ---t-tc-t-tt-tg-tggcaa---gagcacc----t-aaa-a-a-c-t-----------------------------------
i Lepilemur_ankaranensis.k141_884009                C 0 I 18
s Lepilemur_dorsalis.k141_134267                        49532 30 +     63517 ---tttc-t-tt-tg-tggcaa---gagcacc----t-aaa-a-a-c-t-----------------------------------
i Lepilemur_dorsalis.k141_134267                    C 0 I 18
s Lepilemur_ruficaudatus.k141_617879                    74750 29 +    116806 ---t-tc-t-tt-tg-tggcga---gagcacc----t-aaa-a-a-t-t-----------------------------------
i Lepilemur_ruficaudatus.k141_617879                C 0 I 18
s Lepilemur_septentrionalis.k141_578524                 27790 29 -     33031 ---t-tc-t-tt-tg-tggcaa---gagcacc----t-aaa-a-a-c-t-----------------------------------
i Lepilemur_septentrionalis.k141_578524             C 0 I 18
s Lophocebus_aterrimus.ctg55                         19243845 52 +  19376315 a-ta-tg-t-gtgtg-aggaaa---ga--acc----t-aca-a-a-c-t-acc---ctaa---a--gt--a--aaatgccaaat
i Lophocebus_aterrimus.ctg55                        C 0 C 0
s Loris_lydekkerianus.k141_550999                        6756 54 +     84689 ---t-tc-t-tc-cc-tgaaaa---gagcacc----t-aaa-a-aac-t-aa-ccc-tttt--a--gc--a--aactgtcagac
i Loris_lydekkerianus.k141_550999                   C 0 C 0
s Loris_tardigradus.ctg97                             3774515 54 +   6799190 ---t-tc-t-tc-cc-tgaaaa---gagcacc----t-aaa-a-aac-t-aa-ccc-tttt--a--gc--a--aaatgtcagac
i Loris_tardigradus.ctg97                           C 0 C 0
s Macaca_arctoides.k141_2201161                         15530 54 +     74745 a-ta-tg-t-gtgtg-aggaaa---gagtacc----t-aca-a-a-c-t-acc---ccaa---a--gt--a--aaatgccaaat
i Macaca_arctoides.k141_2201161                     C 0 C 0
s Macaca_assamensis.Contig65                         12702036 54 +  12821369 a-ta-tg-t-gtgtg-aggaaa---gagtacc----t-aca-a-a-c-t-acc---ccaa---a--gt--a--aaatgccaaat
i Macaca_assamensis.Contig65                        C 0 C 0
s Macaca_cyclopis.k119_1168412                           4129 54 +      6569 a-ta-tg-t-gtgtg-aggaaa---gagtacc----t-aca-a-a-c-t-acc---ctaa---a--gt--a--aaatgccaaat
i Macaca_cyclopis.k119_1168412                      C 0 C 0
s Macaca_fascicularis.k141_155037                       42429 54 +     63263 a-ta-tg-t-gtgtg-aggaaa---gagtacc----t-aca-a-a-c-t-acc---ctaa---a--gt--a--aaatgccaaat
i Macaca_fascicularis.k141_155037                   C 0 C 0
s Macaca_fuscata.k119_1068107                           11006 54 +     12679 a-ta-tg-t-gtgtg-aggaaa---gagtacc----t-aca-a-a-c-t-acc---ctaa---a--gt--a--aaatgccaaat
i Macaca_fuscata.k119_1068107                       C 0 C 0
s Macaca_leonina.k141_3421209                             579 54 +      3017 a-ta-tg-t-gtgtg-aggaaa---gagtacc----t-aca-a-a-c-t-acc---ctaa---a--gt--a--aaatgccaaat
i Macaca_leonina.k141_3421209                       C 0 C 0
s Macaca_maura.k141_251854                              42191 54 -     79256 a-ta-tg-t-gtgtg-aggaaa---gagtacc----t-aca-a-a-c-t-acc---ctaa---a--gt--a--aaatgccaaat
i Macaca_maura.k141_251854                          C 0 C 0
s Macaca_mulatta.NC_041755.1                        196031111 54 + 196197964 a-ta-tg-t-gtGTG-AGGAAA---GAGTACC----T-ACA-A-A-C-T-ACC---CCAA---A--GT--A--AAATgccaaat
i Macaca_mulatta.NC_041755.1                        C 0 C 0
s Macaca_nemestrina.KQ004885.1                       11441215 54 +  11645122 a-ta-tg-t-gtGTG-AGGAAA---GAGTACC----T-ACA-A-A-C-T-ACC---CTAA---A--GT--A--AAATgccaaat
i Macaca_nemestrina.KQ004885.1                      C 0 C 0
s Macaca_nigra.k141_282495                               1141 54 -     46448 a-ta-tg-t-gtgtg-aggaaa---gagtacc----t-aca-a-a-c-t-acc---ctaa---a--gt--a--aaatgccaaat
i Macaca_nigra.k141_282495                          C 0 C 0
s Macaca_radiata.k141_1580474                             968 54 -      3617 a-ta-tg-t-gtgtg-aggaaa---gagtacc----t-aca-a-a-c-t-acc---ctaa---a--gt--a--aaatgccaaat
i Macaca_radiata.k141_1580474                       C 0 C 0
s Macaca_siberu.k141_741907                             11301 54 -     55006 a-ta-tg-t-gtgtg-aggaaa---gagtacc----t-aca-a-a-c-t-acc---ctaa---a--gt--a--aaatgccaaat
i Macaca_siberu.k141_741907                         C 0 C 0
s Macaca_silenus.Contig12                            43836340 54 +  43892939 a-ta-tg-t-gtgtg-aggaaa---gagtacc----t-aca-a-a-c-t-acc---ccaa---a--gt--a--aaatgccaaat
i Macaca_silenus.Contig12                           C 0 C 0
s Macaca_thibetana.k99_116940                            3563 54 -      5978 a-ta-tg-t-gtgtg-aggaaa---gagtacc----t-aca-a-a-c-t-acc---ccaa---a--gt--a--aaatgccaaat
i Macaca_thibetana.k99_116940                       C 0 C 0
s Macaca_tonkeana.k141_2870633                           1143 54 -     27140 a-ta-tg-t-gtgtg-aggaaa---gagtacc----t-aca-a-a-c-t-acc---ctaa---a--gt--a--aaatgccaaat
i Macaca_tonkeana.k141_2870633                      C 0 C 0
s Mandrillus_leucophaeus.scaffold125                 43433006 52 -  43563597 a-ta-tg-t-gtgtg-aggaaa---ga--acc----t-aca-a-a-c-t-acc---ctaa---a--gt--a--aaatgccaaat
i Mandrillus_leucophaeus.scaffold125                C 0 C 0
s Mandrillus_sphinx.Contig144                         4445832 52 -   4543643 a-ta-tg-t-gtgtg-aggaaa---ga--acc----t-aca-a-a-c-t-acc---ctaa---a--gt--a--aaatgccaaat
i Mandrillus_sphinx.Contig144                       C 0 C 0
s Marmota_marmota.CZRN01000005.1                     36869887 53 +  64221397 --at-tattttt-tg-tggaaa---gagcatc----t-aa-aa-a-c-t-acg---cat----a--ac--a--aaacatcagat
i Marmota_marmota.CZRN01000005.1                    I 2 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233            7793 47 +     15977 -----------t-tg-tggata---gttcatc----agaa--a-a-c-t-act---ctt----t--tacca--aaataccgagc
i Meriones_unguiculatus.MerUng_scaffold_52233       I 2 C 0
s Mesocricetus_auratus.KB708139.1                     1042741 47 -  26018355 -----------t-tg-tggcaa---gattata----taaa--a-a-c-t-ata---ctt----c--caccc--agatgctgaat
i Mesocricetus_auratus.KB708139.1                   I 5 C 0
s Microcebus_murinus.CM007691.1                      16506373 27 +  47401472 ---t-tc-t-tt-tg-tggcaA---GAGTACC----T-GAA-A-A---------------------------------------
i Microcebus_murinus.CM007691.1                     C 0 I 20
s Microtus_ochrogaster.CM001673.1                    22815104 47 -  98408828 -----------t-tg-tggcaa---gataatc----tgaa--a-a-g-c-act---ctt----t--tacca--aaagggcaaat
i Microtus_ochrogaster.CM001673.1                   I 5 C 0
s Miopithecus_ogouensis.k141_2666161                    31678 54 +     34273 a-ta-tg-t-gtgtg-aggaaa---gagtacc----t-aca-a-a-c-t-acc---ctaa---a--gt--a--aaatgccaaat
i Miopithecus_ogouensis.k141_2666161                C 0 C 0
s Mirza_zaza.k141_226143                                 1787 27 +      8497 ---t-tc-t-tt-tg-tggcaa---gagcacc----t-aaa-a-a---------------------------------------
i Mirza_zaza.k141_226143                            C 0 I 20
s Mus_caroli.LT608236.1                              70761261 47 +  92629107 -----------T-TA-TGGCAA---GTTTATC----TGAA--A-A-C-T-ACT---CTT----A--TACCA--AAATgccaaaa
i Mus_caroli.LT608236.1                             I 5 C 0
s Mus_musculus.chr16                                 75484336 47 +  98207768 -----------T-TA-TGGCAA---GTTTATC----TGAA--A-A-C-T-ACT---TGT----A--TACCA--AAATGccaaaa
i Mus_musculus.chr16                                I 5 C 0
s Mus_pahari.LT608305.1                              67548876 47 +  89017189 -----------C-TC-TGGCAA---GTTTATC----TGAA--A-A-c-t-act---ctt----a--tacca--aaatgccaaac
i Mus_pahari.LT608305.1                             I 5 C 0
s Mus_spretus.CM004110.1                             74323974 47 +  97876770 -----------T-TA-TGGCAA---GTTTATC----TGAA--A-A-C-T-ACT---TGT----A--TACCA--AAATgccaaaa
i Mus_spretus.CM004110.1                            I 5 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643          6787 51 +     98495 --tt-tatt-tt-tg-tggtaa---aaacatc----t-aa--a-g-c-t-att---ttt----t--aa--a--aaatgccagtt
i Muscardinus_avellanarius.MusAve_scaffold_9643     I 2 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                 86002 25 -    117718 --tt-ta-a-ct-tc-tggcaa---aagcatg----t-aa--------------------------------------------
i Myocastor_coypus.MyoCoy_scaffold_3653             C 0 I 24
s Nannospalax_galili.KL201303.1                        107079 17 +    362372 -----------t-tg-t---aa---cattatc----tgaa--------------------------------------------
i Nannospalax_galili.KL201303.1                     I 5 I 19
s Nasalis_larvatus.k141_153429                           4043 54 +     48152 g-ta-tg-t-gtgtg-aggaaa---cagtacc----t-aca-a-a-c-t-acc---ctaa---a--gt--a--aaatgccaaat
i Nasalis_larvatus.k141_153429                      C 0 C 0
s Nomascus_concolor.k141_463898                          1654 55 +      1817 A-TA-CG-T-GTGTG-AGGAAA---GTGTACC----C-ACA-A-A-C-T-ACC---CTTTT--A--GT--A--AAATGCCAAAT
i Nomascus_concolor.k141_463898                     C 0 C 0
s Nycticebus_bengalensis.LG16                        65563104 54 -  95554990 ---t-tc-t-tc-cc-tgacaa---gagcacc----t-aaa-a-aag-t-aa-ccc-tttt--a--gc--a--aaatgtcagat
i Nycticebus_bengalensis.LG16                       C 0 C 0
s Nycticebus_coucang.k141_7268257                        2119 54 -      2537 ---t-tc-t-tc-cc-tgacaa---gagcacc----t-aaa-a-aag-t-aa-ccc-tttt--a--gc--a--aaatgtcagat
i Nycticebus_coucang.k141_7268257                   C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17  65665464 54 +  89412551 ---t-tc-t-tc-cc-tgacaa---gagcacc----t-aaa-a-aag-t-aa-ccc-tttt--a--gc--a--aaatgtcagat
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17 C 0 C 0
s Octodon_degus.JH651621.1                            3674532 25 +  10294119 --tt-ta-a-ct-tt-tggcaa---aagcacc----t-aa--------------------------------------------
i Octodon_degus.JH651621.1                          C 0 I 22
s Ondatra_zibethicus.OndZib_scaffold_6821              120754 47 +    145789 -----------t-tg-tagcaa---gataatc----tgaa--a-a-c-t-act---ctt----t--tacca--aagtggcaagt
i Ondatra_zibethicus.OndZib_scaffold_6821           I 5 C 0
s Onychomys_torridus.OnyTor_scaffold_12578              32864 49 +     62360 -----------T-TA-TCGCAA---GA-TATC----TGAG--A-A-C-T-AGTACTCTT----T--TATCA--AGATGCCAGAT
i Onychomys_torridus.OnyTor_scaffold_12578          I 5 C 0
s Otolemur_crassicaudatus.k141_321880                   35411 20 +     38679 ----------------------------cagc----a-aca-a-aaa-t-aa-----tttt--a--------------------
i Otolemur_crassicaudatus.k141_321880               I 9 I 68
s Otolemur_garnettii.GL873528.1                      18004849 20 -  38779656 ----------------------------cagc----a-aca-a-aaa-t-aa-----tttc--a--------------------
i Otolemur_garnettii.GL873528.1                     I 9 I 68
s Pan_paniscus.CM003386.1                           127570673 55 - 205426864 a-ta-tg-t-gtGTG-AGGAAA---GAGTACC----T-ACA-A-A-C-T-ACC---CTTTT--A--GT--A--AAATGTCAAAT
i Pan_paniscus.CM003386.1                           C 0 C 0
s Pan_troglodytes.CM009241.2                        120147820 55 - 196562556 a-ta-tg-t-gtGTG-AGGAAA---GAGTACC----T-ACA-A-A-C-T-ACC---CTTTT--A--GT--A--AAATGTCAAAT
i Pan_troglodytes.CM009241.2                        C 0 C 0
s Papio_anubis.CM001492.2                           188151790 52 - 188283584 a-ta-tg-t-gtGTG-AGGAAA---GA--ACC----T-ACA-A-A-C-T-ACC---CTAA---A--GT--A--AAATgccaaat
i Papio_anubis.CM001492.2                           C 0 C 0
s Papio_cynocephalus.k141_386926                        48002 52 +     76494 a-ta-tg-t-gtgtg-aggaaa---ga--acc----t-aca-a-a-c-t-acc---ctaa---a--gt--a--aaatgccaaat
i Papio_cynocephalus.k141_386926                    C 0 C 0
s Papio_hamadryas.Contig15                           47509186 52 +  47705337 a-ta-tg-t-gtgtg-aggaaa---ga--acc----t-aca-a-a-c-t-acc---ctaa---a--gt--a--aaatgccaaat
i Papio_hamadryas.Contig15                          C 0 C 0
s Papio_kindae.k141_5458022                             63169 52 -    104429 a-ta-tg-t-gtgtg-aggaaa---ga--acc----t-aca-a-a-c-t-acc---ctaa---a--gt--a--aaatgccaaat
i Papio_kindae.k141_5458022                         C 0 C 0
s Papio_papio.k141_3561084                              12953 52 -     29451 a-ta-tg-t-gtgtg-aggaaa---ga--acc----t-aca-a-a-c-t-acc---ctaa---a--gt--a--aaatgccaaat
i Papio_papio.k141_3561084                          C 0 C 0
s Papio_ursinus.k141_3762866                            33358 52 +     35859 a-ta-tg-t-gtgtg-aggaaa---ga--acc----t-aca-a-a-c-t-acc---ctaa---a--gt--a--aaatgccaaat
i Papio_ursinus.k141_3762866                        C 0 C 0
s Perodicticus_ibeanus.k141_117958                       1105 54 -     23713 ---t-tc-t-tc-cc-tgacaa---gagcacc----t-aac-a-aac-t-aa-ccc-tttt--a--gc--a--aaatgtcaaat
i Perodicticus_ibeanus.k141_117958                  C 0 C 0
s Perodicticus_potto.k141_713187                        20402 54 -     27972 ---t-tc-c-tc-cc-tgacaa---gagcacc----t-aaa-a-aac-t-aa-ccc-tttt--a--gc--a--aaatgtcaaat
i Perodicticus_potto.k141_713187                    C 0 C 0
s Peromyscus_maniculatus.KI615518.1                   4946024 49 -   8017169 -----------T-TA-TCGCAA---GA-TATC----TGAA--A-A-C-T-ACTTCTCTT----T--TATCA--AAATGCCAGCT
i Peromyscus_maniculatus.KI615518.1                 I 5 C 0
s Piliocolobus_badius.k141_1497351                       1044 54 -      3310 a-ta-tg-t-gtgtg-aggaaa---cagtacc----t-aca-a-a-c-t-acc---ctaa---a--gt--a--aaatgccaaat
i Piliocolobus_badius.k141_1497351                  C 0 C 0
s Piliocolobus_gordonorum.k141_902470                   20950 54 -     82327 a-ta-tg-t-gtgtg-aggaaa---cagtacc----t-aca-a-a-c-t-acc---ctaa---a--gt--a--aaatgccaaat
i Piliocolobus_gordonorum.k141_902470               C 0 C 0
s Piliocolobus_kirkii.k141_557609                       17701 54 +     19957 a-ta-tg-t-gtgtg-aggaaa---cagtacc----t-aca-a-a-c-t-acc---ctaa---a--gt--a--aaatgccaaat
i Piliocolobus_kirkii.k141_557609                   C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1           26735710 54 +  26888534 a-ta-tg-t-gtGTG-AGGAAA---CAGTACC----T-ACA-A-A-C-T-ACC---CTAA---A--GT--A--AAATgccaaat
i Piliocolobus_tephrosceles.PDMG02000036.1          C 0 C 0
s Pithecia_albicans.k141_991845                         39584 55 -     61926 g-ta-tg-c-atacg-aggaaa---gagtacc----t-aaa-a-a-c-c-acc---ccttt--a--gc--a--aaatgccaaat
i Pithecia_albicans.k141_991845                     C 0 C 0
s Pithecia_chrysocephala.k141_159118                    21013 55 +     78826 g-ta-tg-c-ctaca-aggaaa---gagtacc----t-aaa-a-a-c-c-acc---ccttt--a--gc--a--aaatgccaaat
i Pithecia_chrysocephala.k141_159118                C 0 C 0
s Pithecia_hirsuta.k141_1152968                          4964 55 -     15800 g-ta-tg-c-atacg-aggaaa---gagtacc----t-aaa-a-a-c-c-acc---ccttt--a--gc--a--aaatgccaaat
i Pithecia_hirsuta.k141_1152968                     C 0 C 0
s Pithecia_mittermeieri.k141_2119203                     8162 55 -     16101 g-ta-tg-c-gtacg-aggaaa---gagtacc----t-aaa-a-a-c-c-acc---ccttt--a--gc--a--aaatgccaaat
i Pithecia_mittermeieri.k141_2119203                C 0 C 0
s Pithecia_pissinattii.k141_1102319                      1471 55 +      9673 g-ta-tg-c-gtacg-aggaaa---gagtacc----t-aaa-a-a-c-c-acc---ccttt--a--gc--a--aaatgccaaat
i Pithecia_pissinattii.k141_1102319                 C 0 C 0
s Pithecia_pithecia.tarseq_313                       13470465 55 -  19735023 g-ta-tg-c-gtacg-aggaaa---gagtacc----t-aaa-a-a-c-t-acc---ccttt--a--gc--a--aaatgccaaat
i Pithecia_pithecia.tarseq_313                      C 0 C 0
s Pithecia_vanzolinii.k141_831006                        9373 55 -     31692 g-ta-tg-c-atacg-aggaaa---gagtacc----t-aaa-a-a-c-c-acc---ccttt--a--gc--a--aaatgccaaat
i Pithecia_vanzolinii.k141_831006                   C 0 C 0
s Plecturocebus_bernhardi.k141_959214                   18737 55 +     44506 g-ta-tg-g-gtatg-aggaaa---gaatacc----t-aca-a-a-c-c-acc---ccttt--a--gc--a--aaatgccaaat
i Plecturocebus_bernhardi.k141_959214               C 0 C 0
s Plecturocebus_brunneus.k141_498086                    18955 55 +     67491 g-ta-tg-g-gtatg-aggaaa---gaatacc----t-aca-a-a-c-c-acc---ccttt--a--gc--a--aaatgccaaat
i Plecturocebus_brunneus.k141_498086                C 0 C 0
s Plecturocebus_caligatus.k141_2539816                   9200 55 -     98129 g-ta-tg-g-gtatg-aggaaa---gaatacc----t-aca-a-a-c-c-acc---ccttt--a--gc--a--aaatgccaaat
i Plecturocebus_caligatus.k141_2539816              C 0 C 0
s Plecturocebus_cinerascens.k141_744510                 18800 55 +    147771 g-ta-tg-g-gtatg-aggaaa---gaatacc----t-aca-a-a-c-c-acc---ccttt--a--gc--a--aaatgccaaat
i Plecturocebus_cinerascens.k141_744510             C 0 C 0
s Plecturocebus_cupreus.k141_1223294                    19051 55 -     23762 g-ta-tg-g-gtatg-aggaaa---gaatacc----t-aca-a-a-c-c-acc---tcttt--a--gc--a--aaatgccaaat
i Plecturocebus_cupreus.k141_1223294                C 0 C 0
s Plecturocebus_dubius.k141_2078842                     18999 55 -     19696 g-ta-tg-g-gtatg-aggaaa---gaatacc----t-aca-a-a-c-c-acc---ccttt--a--gc--a--aaatgccaaat
i Plecturocebus_dubius.k141_2078842                 C 0 C 0
s Plecturocebus_grovesi.k141_242819                     18873 55 +    152463 g-ta-tg-g-gtatg-aggaaa---gaatacc----t-aca-a-a-c-c-act---ccttt--a--gc--a--aaatgccaaat
i Plecturocebus_grovesi.k141_242819                 C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                  5630 55 +      8943 g-ta-tg-g-gtatg-aggaaa---gaatacc----t-aca-a-a-c-c-acc---ccttt--a--gc--a--aaatgccaaat
i Plecturocebus_hoffmannsi.k141_1595076             C 0 C 0
s Plecturocebus_miltoni.k141_841561                      8590 55 +    134592 g-ta-tg-g-gtatg-aggaaa---gaatacc----t-aca-a-a-c-c-acc---ccttt--a--gc--a--aaatgccaaat
i Plecturocebus_miltoni.k141_841561                 C 0 C 0
s Plecturocebus_moloch.k141_890597                      19183 55 -     75465 g-ta-tg-g-gtatg-aggaaa---gaatacc----t-aca-a-a-c-c-act---ccttt--a--gc--a--aaatgccaaat
i Plecturocebus_moloch.k141_890597                  C 0 C 0
s Pongo_abelii.NDHI03003816.1                          183227 55 -    373494 A-TA-TG-T-GTGTG-AGGAAA---GAGTACC----T-ACA-A-A-C-T-ACC---CTTTT--A--GT--A--AAATgccaaat
i Pongo_abelii.NDHI03003816.1                       C 0 C 0
s Pongo_pygmaeus.ctg62                               19803129 55 +  19899266 A-TA-TG-t-gtgtg-aggaaa---gagtacc----t-aca-a-a-c-t-acc---ctttt--a--gt--a--aaatgccaaat
i Pongo_pygmaeus.ctg62                              C 0 C 0
s Presbytis_comata.k141_672698                           1280 54 -     15069 a-ta-tg-t-gtgtg-aggaaa---cagtacc----t-aca-a-a-c-t-acc---ctaa---a--gt--a--aaatgccaaat
i Presbytis_comata.k141_672698                      C 0 C 0
s Presbytis_mitrata.k141_860013                          1415 42 +     14865 a-ta-tg-t-gtgtg-aggaaa---cagtacc----t-aca-a-a-c-t-acc---ctaa---a--gt----------------
i Presbytis_mitrata.k141_860013                     C 0 I 11
s Prolemur_simus.MPIZ01000048.1                       6844640 27 +  12164890 ---t-tc-t-tt-tg-tggcaa---gagcacc----t-aga-a-a---------------------------------------
i Prolemur_simus.MPIZ01000048.1                     C 0 I 14
s Propithecus_coquerelli.NW_012147997.1                663912 29 -   2312742 ---t-tc-t-tt-tg-tggcaa---GAGTACC----T-AAA-A-A-T-T-----------------------------------
i Propithecus_coquerelli.NW_012147997.1             C 0 I 20
s Propithecus_coronatus.k141_844990                     30664 29 +     30823 ---t-tc-t-tt-tg-tggcaa---gagtacc----t-aaa-a-a-c-t-----------------------------------
i Propithecus_coronatus.k141_844990                 C 0 I 20
s Propithecus_diadema.k141_577245                       39104 29 +     52369 ---t-tc-t-tt-tg-tggcaa---aagcacc----t-aaa-a-a-c-t-----------------------------------
i Propithecus_diadema.k141_577245                   C 0 I 17
s Propithecus_edwardsi.k141_1317105                     31493 29 -     44753 ---t-tc-t-tt-tg-tggcaa---gagcacc----t-aaa-a-a-c-t-----------------------------------
i Propithecus_edwardsi.k141_1317105                 C 0 I 17
s Propithecus_perrieri.k141_7554                        13415 29 +     27322 ---t-tc-t-tt-tg-tggcaa---aagcacc----t-aaa-a-a-c-t-----------------------------------
i Propithecus_perrieri.k141_7554                    C 0 I 17
s Propithecus_tattersalli.k141_907138                   13056 29 -     53241 ---t-tc-t-tt-tg-tggcaa---gagcacc----t-aaa-a-a-c-t-----------------------------------
i Propithecus_tattersalli.k141_907138               C 0 I 20
s Propithecus_verreauxi.k141_158021                     35327 29 -     48185 ---t-tc-t-tt-tg-tggcaa---gagtacc----t-aaa-a-a-c-t-----------------------------------
i Propithecus_verreauxi.k141_158021                 C 0 I 20
s Psammomys_obesus.NESX01026517.1                       28854 47 +     77221 -----------t-tg-tggcca---gttcatc----agaa--a-a-c-t-act---ctt----t--tacca--aaatgctaaac
i Psammomys_obesus.NESX01026517.1                   I 5 C 0
s Pygathrix_cinerea.k141_374971                         25405 54 +     56732 g-ta-tg-t-gtgtg-aggaaa---cagtacc----t-aca-a-a-c-t-acc---ctaa---a--gt--a--aaatgccaaat
i Pygathrix_cinerea.k141_374971                     C 0 C 0
s Pygathrix_nigripes_b.ctg79                             6801894 55 +   6970761 gtta-tg-t-gtgtg-aggaaa---cagtacc----t-aca-a-a-c-t-acc---ctaa---a--gt--a--aaatgccaaat
i Pygathrix_nigripes_b.ctg79                           C 0 C 0
s Pygathrix_nigripes_a.k141_101123                         1287 54 +     18040 g-ta-tg-t-gtgtg-aggaaa---cagtacc----t-aca-a-a-c-t-acc---ctaa---a--gt--a--aaatgccaaat
i Pygathrix_nigripes_a.k141_101123                    C 0 C 0
s Rattus_norvegicus.chr11                            13910799 46 +  90463843 -----------T-TA-GGTCAA---GTTCATC----TGAA--A-A-C-T-TCT---CTT----A--TACCA--AAATGCTAA-T
i Rattus_norvegicus.chr11                           I 5 C 0
s Rhinopithecus_bieti.k119_102124                       11842 54 -     14454 g-ta-tg-t-gtgtg-aggaaa---cagtacc----t-aca-a-a-c-t-acc---ctaa---a--gt--a--aaatgccaagt
i Rhinopithecus_bieti.k119_102124                   C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1               206373168 54 - 206558726 g-ta-tg-t-gtGTG-AGGAAA---CAGTACC----T-ACA-A-A-C-T-ACC---CTAA---A--GT--A--AAATGCCAagt
i Rhinopithecus_roxellana.NC_044549.1               C 0 C 0
s Rhinopithecus_strykeri.ctg4                        44850816 54 -  45163003 g-ta-tg-t-gtgtg-aggaaa---cagtacc----t-aca-a-a-c-t-acc---ctaa---a--gt--a--aaatgccaagt
i Rhinopithecus_strykeri.ctg4                       C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                 15668608 55 -  43202129 G-TA-TG-G-GTGTG-AGGAAA---GAGTACC----T-ACA-A-A-C-C-ACC---CCTTT--A--GC--A--AAATgccaaat
i Saimiri_boliviensis.NW_024100938.1                C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                     483 55 +     34089 g-ta-tg-g-gtgtg-aggaaa---gagtacc----t-aca-a-a-c-c-acc---ccttt--a--gc--a--aaatgccaaat
i Saimiri_cassiquiarensis.k141_808270               C 0 C 0
s Saimiri_macrodon.k141_2087127                           414 55 -     60842 g-ta-tg-g-gtgtg-aggaaa---gagtacc----t-aca-a-a-c-c-acc---ccttt--a--gc--a--aaatgccaaat
i Saimiri_macrodon.k141_2087127                     C 0 C 0
s Saimiri_oerstedii.k141_841116                           483 55 +     67014 g-ta-tg-g-gtgtg-aggaaa---gagtacc----t-aca-a-a-c-c-acc---ccttt--a--gc--a--aaatgccaaat
i Saimiri_oerstedii.k141_841116                     C 0 C 0
s Saimiri_sciureus.k141_1947592                           483 55 +     60816 g-ta-tg-g-gtgtg-aggaaa---gagtacc----t-aca-a-a-c-c-acc---ccttt--a--gc--a--aaatgccaaat
i Saimiri_sciureus.k141_1947592                     C 0 C 0
s Saimiri_ustus.k141_1282476                              411 55 -     76454 g-ta-tg-g-gtgtg-aggaaa---gagtacc----t-aca-a-a-c-c-acc---ccttt--a--gc--a--aaatgccaaat
i Saimiri_ustus.k141_1282476                        C 0 C 0
s Sapajus_apella.ctg10                               17336991 55 -  30362882 g-ta-tg-g-gtatg-aggaaa---gagtacc----t-aca-a-a-c-c-acc---ccttt--a--gc--a--aaatgccaaat
i Sapajus_apella.ctg10                              C 0 C 0
s Sapajus_macrocephalus.k141_966464                     16592 55 -     62485 g-ta-tg-g-gtatg-aggaaa---gagtacc----t-aca-a-a-c-c-acc---ccttt--a--gc--a--aaatgccaaat
i Sapajus_macrocephalus.k141_966464                 C 0 C 0
s Semnopithecus_entellus.k141_1527475                   23830 54 +     26421 a-ta-tg-t-gtgtg-aggaaa---cagtacc----t-aca-a-a-c-t-acc---ctaa---a--gt--a--aaatgccaaat
i Semnopithecus_entellus.k141_1527475               C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                   4292 54 +     20762 a-ta-tg-t-gtgtg-aggaaa---cagtacc----t-aca-a-a-c-t-acc---ctaa---a--gt--a--aaatgccaaat
i Semnopithecus_hypoleucos.k141_761524              C 0 C 0
s Semnopithecus_johnii.k141_1351450                     38025 54 +     40653 a-ta-tg-t-gtgtg-aggaaa---cagtacc----t-aca-a-a-c-t-acc---ctaa---a--gt--a--aaatgccaaat
i Semnopithecus_johnii.k141_1351450                 C 0 C 0
s Semnopithecus_priam.k141_198153                        8584 54 -     12194 a-ta-tg-t-gtgtg-aggaaa---cagtacc----t-aca-a-a-c-t-acc---ctaa---a--gt--a--aaatgccaaat
i Semnopithecus_priam.k141_198153                   C 0 C 0
s Semnopithecus_schistaceus.k141_653647                 22003 54 -     27512 a-ta-tg-t-gtgtg-aggaaa---cagtacc----t-aca-a-a-c-t-acc---ctaa---a--gt--a--aaatgccaaat
i Semnopithecus_schistaceus.k141_653647             C 0 C 0
s Semnopithecus_vetulus.k141_642050                     31024 54 -     33692 a-ta-tg-t-gtgtg-aggaaa---cagtacc----t-aca-a-a-c-t-acc---ctaa---a--gt--a--aaatgccaaat
i Semnopithecus_vetulus.k141_642050                 C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332               94136 29 -    120886 -----------T-TG-TGGCAC---TGTTATC----TAAA--A-A-T-G-ACT---CT--------------------------
i Sigmodon_hispidus.SigHis_scaffold_11332           I 5 I 16
s Spermophilus_dauricus.KZ294190.1                    2235969 53 +   2842873 --at-tattttt-tg-tggcaa---gaacatc----t-aa-aa-a-c-t-aca---ctt----a--ac--a--aaatatcggat
i Spermophilus_dauricus.KZ294190.1                  I 2 C 0
s Symphalangus_syndactylus.tarseq_24                    10941 55 -  13920577 a-ta-tg-t-gtgtg-aggaaa---tagtacc----c-aca-a-a-c-t-acc---ctttt--a--gt--a--aaatgccaaat
i Symphalangus_syndactylus.tarseq_24                C 0 I 2
s Tarsius_lariang.k141_609102                           22738 54 +     42269 --tg-ag-g-gaaaa-agagaa---gagcacc----t-aaa-a-g-t-g-acc---ctttc--a--gc--a--aaatgccaaac
i Tarsius_lariang.k141_609102                       C 0 C 0
s Tarsius_wallacei.k141_48636                           56046 54 +     65473 --tg-ag-g-gaaaa-agagaa---gagcacc----t-aaa-a-g-t-g-acc---ctttc--a--gc--a--aaatgccaaac
i Tarsius_wallacei.k141_48636                       C 0 C 0
s Theropithecus_gelada.CM009951.1                   194003326 52 - 194193292 a-ta-tg-t-gtGTG-AGGAAA---GA--ACC----T-ACA-A-A-C-T-ACC---CTAA---A--GT--A--AAATgccaaat
i Theropithecus_gelada.CM009951.1                   C 0 C 0
s Trachypithecus_auratus.k141_738098                    22402 54 +     38948 a-ta-tg-t-gtgtg-aggaaa---cagtacc----t-aca-a-a-c-t-acc---ctaa---a--gt--a--aaatgccaaat
i Trachypithecus_auratus.k141_738098                C 0 C 0
s Trachypithecus_crepusculus.k141_1588528               16129 54 -     32910 a-ta-tg-t-gtgtg-aggaaa---cagtacc----t-aca-a-a-c-t-acc---ctaa---a--gt--a--aaatgccaaat
i Trachypithecus_crepusculus.k141_1588528           C 0 C 0
s Trachypithecus_cristatus.k141_27198                   22027 54 +     24652 a-ta-tg-t-gtgtg-aggaaa---cagtacc----t-aca-a-a-c-t-acc---ctaa---a--gt--a--aaatgccaaat
i Trachypithecus_cristatus.k141_27198               C 0 C 0
s Trachypithecus_francoisi.k141_1178450                   912 54 -      3559 a-ta-tg-t-gtgtg-aggaaa---cagtacc----t-aca-a-a-c-t-acc---ctaa---a--gt--a--aaatgccaaat
i Trachypithecus_francoisi.k141_1178450             C 0 C 0
s Trachypithecus_geei.k141_670367                       38851 54 -     54611 a-ta-tg-t-gtgtg-aggaaa---cagtacc----t-aca-a-a-c-t-acc---ctaa---a--gt--a--aaatgccaaat
i Trachypithecus_geei.k141_670367                   I 2 C 0
s Trachypithecus_germaini.k141_809503                   14850 54 +     17312 a-ta-tg-t-gtgtg-aggaaa---cagtacc----t-aca-a-a-c-t-acc---ctaa---a--gt--a--aaatgccaaat
i Trachypithecus_germaini.k141_809503               C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                22220 54 -     25040 a-ta-tg-t-gtgtg-aggaaa---cagtacc----t-aca-a-a-c-t-acc---ctaa---a--gt--a--aaatgccaaat
i Trachypithecus_hatinhensis.k141_357672            C 0 C 0
s Trachypithecus_laotum.k141_171445                       886 54 +      3528 a-ta-tg-t-gtgtg-aggaaa---cagtacc----t-aca-a-a-c-t-acc---ctaa---a--gt--a--aaatgccaaat
i Trachypithecus_laotum.k141_171445                 C 0 C 0
s Trachypithecus_leucocephalus.k141_283605              47248 54 +     51589 a-ta-tg-t-gtgtg-aggaaa---cagtacc----t-aca-a-a-c-t-acc---ctaa---a--gt--a--aaatgccaaat
i Trachypithecus_leucocephalus.k141_283605          C 0 C 0
s Trachypithecus_melamera.k141_238507                   10416 54 +     14732 a-ta-tg-t-gtgtg-aggaaa---cagtacc----t-aca-a-a-c-t-acc---ctaa---a--gt--a--aaatgccaaat
i Trachypithecus_melamera.k141_238507               C 0 C 0
s Trachypithecus_obscurus.k141_1115109                    894 54 -     28054 a-ta-tg-t-gtgtg-aggaaa---cagtacc----t-aca-a-a-c-t-acc---ctaa---a--gt--a--aaatgccaaat
i Trachypithecus_obscurus.k141_1115109              C 0 C 0
s Trachypithecus_phayrei.ctg3                        44655689 54 -  44834318 a-ta-tg-t-gtgtg-aggaaa---cagtacc----t-aca-a-a-c-t-acc---ctaa---a--gt--a--aaatgccaaat
i Trachypithecus_phayrei.ctg3                       C 0 C 0
s Trachypithecus_pileatus.k141_469329                     699 54 +      3372 a-ta-tg-t-gtgtg-aggaaa---cagtacc----t-aca-a-a-c-t-acc---ctaa---a--gt--a--aaatgccaaat
i Trachypithecus_pileatus.k141_469329               I 2 C 0
s Tupaia_chinensis.KB320831.1                         2785953 52 -   3938065 --tt-ca-c-tt-tg-taacaa---gaacacc----t-gaa-a-t-c-t-act---ctt--t-t--ag--a--aagtgtcaaat
i Tupaia_chinensis.KB320831.1                       I 3 C 0
s Tupaia_tana.TupTan_flattened_line_251551               4346 55 -      5019 --tt-ca-c-tt-tg-taacaagaagaacacc----t-gaa-a-t-c-t-act---ctt--t-t--ag--a--aattgtcaaat
i Tupaia_tana.TupTan_flattened_line_251551          I 3 C 0
s Varecia_rubra.k141_432109                              1578 29 -     20643 ---t-tc-t-tt-tg-tggcaa---gagcacc----t-aga-a-a-c-t-----------------------------------
i Varecia_rubra.k141_432109                         C 0 I 20
s Varecia_variegata.k141_775891                         21123 29 -     33872 ---t-tc-t-tt-tg-tggcaa---gagcacc----t-aga-a-a-c-t-----------------------------------
i Varecia_variegata.k141_775891                     C 0 I 20
s Xerus_inauris.XerIna_scaffold_7898                   123142 53 -    134049 --at-tattttt-tg-tggcaa---gagcacc----t-aa-aa-a-c-t-act---ctt----a--ac--a--aaatgccagat
i Xerus_inauris.XerIna_scaffold_7898                I 2 C 0
e Nomascus_siki_b.tarseq_80                         20456  0 -  18771707 C
e Nomascus_annamensis.k141_745421                         374  0 -      4569 C
e Nomascus_gabriellae.k141_1350167                        785  0 +      9928 C

a score=0.000000
s hg38.chr4_GL000008v2_random                            7994 2 +    209709 AC
s Acomys_cahirinus.AcoCah_scaffold_1625                108392 2 -    189883 GC
i Acomys_cahirinus.AcoCah_scaffold_1625             C 0 I 3
s Allenopithecus_nigroviridis.k141_3103707              59016 2 +     61638 ac
i Allenopithecus_nigroviridis.k141_3103707          C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                    50824 2 +     53391 ac
i Allochrocebus_lhoesti.k141_4825038                C 0 C 0
s Allochrocebus_preussi.k141_1202907                     1548 2 +     72529 ac
i Allochrocebus_preussi.k141_1202907                C 0 C 0
s Allochrocebus_solatus.k141_787528                      1125 2 +      3797 ac
i Allochrocebus_solatus.k141_787528                 C 0 C 0
s Alouatta_belzebul.k141_1818029                         6210 2 -     18050 ac
i Alouatta_belzebul.k141_1818029                    C 0 C 0
s Alouatta_caraya.k141_5460                              7327 2 -     11521 ac
i Alouatta_caraya.k141_5460                         C 0 C 0
s Alouatta_discolor.k141_811576                          6885 2 -     21359 ac
i Alouatta_discolor.k141_811576                     C 0 C 0
s Alouatta_juara.k141_1856473                            5268 2 +      7227 ac
i Alouatta_juara.k141_1856473                       C 0 C 0
s Alouatta_macconnelli.k141_1331706                      6183 2 -     10438 ac
i Alouatta_macconnelli.k141_1331706                 C 0 C 0
s Alouatta_nigerrima.k141_2718643                        2837 2 +      7047 ac
i Alouatta_nigerrima.k141_2718643                   C 0 C 0
s Alouatta_palliata.k141_1316127                         6121 2 +     10410 ac
i Alouatta_palliata.k141_1316127                    C 0 C 0
s Alouatta_puruensis.k141_390786                         7398 2 -      7615 ac
i Alouatta_puruensis.k141_390786                    C 0 C 0
s Alouatta_seniculus.k141_990213                         2842 2 +      6429 ac
i Alouatta_seniculus.k141_990213                    C 0 C 0
s Aotus_azarae.k141_3170768                             58525 2 +     78111 ac
i Aotus_azarae.k141_3170768                         C 0 C 0
s Aotus_griseimembra.k141_3275623                        1456 2 +     22701 ac
i Aotus_griseimembra.k141_3275623                   C 0 C 0
s Aotus_nancymaae.KZ196176.1                          5745416 2 +   9889416 ac
i Aotus_nancymaae.KZ196176.1                        C 0 C 0
s Aotus_trivirgatus.k141_1740727                         2008 2 -    104377 ac
i Aotus_trivirgatus.k141_1740727                    C 0 C 0
s Aotus_vociferans.k141_718647                           2008 2 +     23246 ac
i Aotus_vociferans.k141_718647                      C 0 C 0
s Arctocebus_calabarensis.k141_1161114                  14311 2 +     17483 gt
i Arctocebus_calabarensis.k141_1161114              C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                         9535269 2 +  39197703 ac
i Ateles_geoffroyi_b.tarseq_2582                       C 0 C 0
s Ateles_belzebuth.k141_1348307                         56557 2 +     85812 ac
i Ateles_belzebuth.k141_1348307                     C 0 C 0
s Ateles_chamek.k141_1072810                             7554 2 +     89302 ac
i Ateles_chamek.k141_1072810                        C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                         12063 2 -     58268 ac
i Ateles_geoffroyi_a.k141_1300742                     C 0 C 0
s Ateles_marginatus.k141_899112                         60051 2 +    119057 ac
i Ateles_marginatus.k141_899112                     C 0 C 0
s Ateles_paniscus.k141_1631200                           2002 2 -     25888 ac
i Ateles_paniscus.k141_1631200                      C 0 C 0
s Avahi_laniger.k141_2840928                             2867 2 -     16375 at
i Avahi_laniger.k141_2840928                        C 0 C 0
s Avahi_peyrierasi.k141_767228                           8840 2 -      9688 at
i Avahi_peyrierasi.k141_767228                      I 20 C 0
s Cacajao_ayresi.k141_724503                           109926 2 -    171031 ac
i Cacajao_ayresi.k141_724503                        C 0 C 0
s Cacajao_calvus.k141_96166                              8952 2 +    125063 ac
i Cacajao_calvus.k141_96166                         C 0 C 0
s Cacajao_hosomi.k141_303789                            11000 2 -    216513 ac
i Cacajao_hosomi.k141_303789                        C 0 C 0
s Cacajao_melanocephalus.k141_1160263                    3539 2 -    134917 ac
i Cacajao_melanocephalus.k141_1160263               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_647363               297 1 +      1887 -a
i Capromys_pilorides.CapPil_scaffold_647363         I 21 I 3
s Carlito_syrichta.NW_007248099.1                      305307 2 +    345090 ac
i Carlito_syrichta.NW_007248099.1                   C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037               26860 2 +     33760 ac
i Castor_canadensis.CasCan_scaffold_47037           C 0 I 3
s Cavia_aperea.AVPZ01000278.1                        15783594 2 -  24422027 ac
i Cavia_aperea.AVPZ01000278.1                       I 12 I 3
s Cavia_porcellus.DS562889.1                         15795528 2 -  24440124 ac
i Cavia_porcellus.DS562889.1                        I 12 I 3
s Cavia_tschudii.CavTsc_scaffold_488                   173719 2 +    436027 ac
i Cavia_tschudii.CavTsc_scaffold_488                I 12 I 3
s Cebus_albifrons.Contig22                           18886737 2 -  29618158 ac
i Cebus_albifrons.Contig22                          C 0 C 0
s Cebus_olivaceus.k141_93739                             4283 2 -     26817 ac
i Cebus_olivaceus.k141_93739                        C 0 C 0
s Cebus_unicolor.k141_239009                             8523 2 +     25043 ac
i Cebus_unicolor.k141_239009                        C 0 C 0
s Cephalopachus_bancanus.k141_702587                     4343 2 +     21754 ac
i Cephalopachus_bancanus.k141_702587                C 0 C 0
s Cercocebus_atys.KQ010443.1                          6550812 2 +   6739814 ac
i Cercocebus_atys.KQ010443.1                        C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                  52289 2 -     54931 ac
i Cercocebus_chrysogaster.k141_2951608              C 0 C 0
s Cercocebus_lunulatus.k141_3387186                     17273 2 -     19697 ac
i Cercocebus_lunulatus.k141_3387186                 C 0 C 0
s Cercocebus_torquatus.k141_3969582                     54804 2 -    107033 ac
i Cercocebus_torquatus.k141_3969582                 C 0 C 0
s Cercopithecus_ascanius.k141_3371259                    1247 2 -      3853 ac
i Cercopithecus_ascanius.k141_3371259               C 0 C 0
s Cercopithecus_cephus.k141_598190                      25179 2 +     30494 ac
i Cercopithecus_cephus.k141_598190                  C 0 C 0
s Cercopithecus_diana.k141_1490386                       1202 2 -      4022 ac
i Cercopithecus_diana.k141_1490386                  C 0 C 0
s Cercopithecus_hamlyni.k141_381099                      1092 2 -      3505 ac
i Cercopithecus_hamlyni.k141_381099                 C 0 C 0
s Cercopithecus_lowei.k141_623764                       19903 2 +     35983 ac
i Cercopithecus_lowei.k141_623764                   C 0 C 0
s Cercopithecus_albogularis.ctg51                          11985679 2 +  12117833 ac
i Cercopithecus_albogularis.ctg51                         C 0 C 0
s Cercopithecus_mona.ctg12                           46473175 2 +  46592721 ac
i Cercopithecus_mona.ctg12                          C 0 C 0
s Cercopithecus_neglectus.k141_1474992                  31002 2 +     33420 ac
i Cercopithecus_neglectus.k141_1474992              C 0 C 0
s Cercopithecus_nictitans.k141_675209                    1038 2 -      3443 ac
i Cercopithecus_nictitans.k141_675209               C 0 C 0
s Cercopithecus_petaurista.k141_2037881                  2029 2 -      4669 ac
i Cercopithecus_petaurista.k141_2037881             C 0 C 0
s Cercopithecus_pogonias.k141_1977419                    1833 2 -      4411 ac
i Cercopithecus_pogonias.k141_1977419               C 0 C 0
s Cercopithecus_roloway.k141_3372345                     1353 2 -      4205 ac
i Cercopithecus_roloway.k141_3372345                C 0 C 0
s Cheirogaleus_major.k141_1157592                       55209 2 -     68416 at
i Cheirogaleus_major.k141_1157592                   I 20 I 5
s Cheirogaleus_medius.k141_133808                        4259 2 +     13308 at
i Cheirogaleus_medius.k141_133808                   I 20 I 5
s Cheracebus_lucifer.k141_619653                         1536 2 -     18223 ac
i Cheracebus_lucifer.k141_619653                    C 0 C 0
s Cheracebus_lugens.k141_203936                         18559 2 +     25473 ac
i Cheracebus_lugens.k141_203936                     C 0 C 0
s Cheracebus_regulus.k141_2128895                       37598 2 +     57117 ac
i Cheracebus_regulus.k141_2128895                   C 0 C 0
s Cheracebus_torquatus.k141_315545                      42273 2 +     54541 ac
i Cheracebus_torquatus.k141_315545                  C 0 C 0
s Chinchilla_lanigera.JH721867.1                     15957721 2 +  43084221 ac
i Chinchilla_lanigera.JH721867.1                    I 14 I 3
s Chiropotes_israelita.k141_1189915                     67147 2 +    196370 ac
i Chiropotes_israelita.k141_1189915                 C 0 C 0
s Chiropotes_sagulatus.k141_773804                      11321 2 +     40510 ac
i Chiropotes_sagulatus.k141_773804                  C 0 C 0
s Chlorocebus_aethiops.ctg22                         15134633 2 -  15256731 ac
i Chlorocebus_aethiops.ctg22                        C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                  29679 2 -     53260 ac
i Chlorocebus_pygerythrus.k141_1486215              C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                    101140127 2 + 101219884 ac
i Chlorocebus_sabaeus.CM001963.2                    C 0 C 0
s Colobus_angolensis.KN985967.1                      10878709 2 +  10971483 ac
i Colobus_angolensis.KN985967.1                     C 0 C 0
s Colobus_guereza.LG08                              147659868 2 + 156195979 ac
i Colobus_guereza.LG08                              C 0 C 0
s Colobus_polykomos.k141_1406057                        11853 2 +     23629 ac
i Colobus_polykomos.k141_1406057                    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949             273828 2 -    399297 at
i Cricetomys_gambianus.CriGam_scaffold_949          C 0 I 3
s Cricetulus_griseus.LT883672.1                      53025305 2 +  72327488 ac
i Cricetulus_griseus.LT883672.1                     C 0 I 3
s Ctenodactylus_gundi.CteGun_scaffold_447              204541 2 -    956709 AC
i Ctenodactylus_gundi.CteGun_scaffold_447           I 18 I 3
s Ctenomys_sociabilis.CteSoc_scaffold_19489             26455 2 -     67205 aa
i Ctenomys_sociabilis.CteSoc_scaffold_19489         I 22 I 3
s Cuniculus_paca.CunPac_flattened_line_16637            14473 2 +     26546 ac
i Cuniculus_paca.CunPac_flattened_line_16637        I 21 I 3
s Dasyprocta_punctata.DasPun_flattened_line_634         55946 2 -    236241 ac
i Dasyprocta_punctata.DasPun_flattened_line_634     I 19 I 3
s Daubentonia_madagascariensis.ctg11                 16841069 2 +  31942871 ag
i Daubentonia_madagascariensis.ctg11                C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102            33106 2 -     73477 ac
i Dolichotis_patagonum.DolPat_scaffold_14102        I 12 I 3
s Ellobius_lutescens.LOEQ01003611.1                    235491 2 -    369425 ac
i Ellobius_lutescens.LOEQ01003611.1                 C 0 I 3
s Ellobius_talpinus.LOJH01090055.1                       2500 2 -      7838 ac
i Ellobius_talpinus.LOJH01090055.1                  C 0 I 3
s Erythrocebus_patas.Contig8                         48766812 2 -  48907691 ac
i Erythrocebus_patas.Contig8                        C 0 C 0
s Eulemur_albifrons.k141_715837                          1280 2 +     13586 at
i Eulemur_albifrons.k141_715837                     I 20 C 0
s Eulemur_collaris.k141_311830                           1217 2 -      6809 at
i Eulemur_collaris.k141_311830                      I 20 C 0
s Eulemur_coronatus.k141_3240342                         7687 2 +     36558 at
i Eulemur_coronatus.k141_3240342                    I 20 C 0
s Eulemur_flavifrons.k141_903901                         4004 2 +     60246 at
i Eulemur_flavifrons.k141_903901                    I 20 C 0
s Eulemur_fulvus.k141_653297                             7492 2 +    109717 at
i Eulemur_fulvus.k141_653297                        I 20 C 0
s Eulemur_macaco.k141_1341545                           11866 2 +     16540 at
i Eulemur_macaco.k141_1341545                       I 20 C 0
s Eulemur_mongoz.k141_825972                            12143 2 +     27497 at
i Eulemur_mongoz.k141_825972                        I 20 C 0
s Eulemur_rubriventer.k141_411740                       14599 2 +     26808 at
i Eulemur_rubriventer.k141_411740                   I 20 C 0
s Eulemur_rufus.k141_1620292                            29333 2 +     46535 at
i Eulemur_rufus.k141_1620292                        I 20 C 0
s Eulemur_sanfordi.k141_186399                          12056 2 -     29447 at
i Eulemur_sanfordi.k141_186399                      I 20 C 0
s Fukomys_damarensis.KN123630.1                      13889279 2 -  19261668 ac
i Fukomys_damarensis.KN123630.1                     I 12 I 3
s Galeopterus_variegatus.GalVar_scaffold_354           152531 2 +    324696 ac
i Galeopterus_variegatus.GalVar_scaffold_354        C 0 C 0
s Gorilla_beringei.k141_111300                           1386 2 -     14630 ac
i Gorilla_beringei.k141_111300                      C 0 C 0
s Gorilla_gorilla.LT578340.1                        119648484 2 - 195582420 ac
i Gorilla_gorilla.LT578340.1                        C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                     1827 2 +      3980 at
i Hapalemur_alaotrensis.k141_1198205                I 20 C 0
s Hapalemur_gilberti.k141_97962                         24305 2 +     26611 at
i Hapalemur_gilberti.k141_97962                     I 20 C 0
s Hapalemur_griseus.k141_1387522                         1759 2 +     56096 at
i Hapalemur_griseus.k141_1387522                    I 20 C 0
s Hapalemur_meridionalis.k141_186231                    25032 2 -     42470 at
i Hapalemur_meridionalis.k141_186231                I 20 C 0
s Hapalemur_occidentalis.k141_797938                    41632 2 -     54384 at
i Hapalemur_occidentalis.k141_797938                I 20 C 0
s Heterocephalus_glaber.JH602058.1                    2547267 2 +  31725842 ac
i Heterocephalus_glaber.JH602058.1                  I 117 I 3
s Hoolock_leuconedys.ctg649                                98058 2 +    115816 ac
i Hoolock_leuconedys.ctg649                            n 1270 C 0
s Hylobates_abbotti.k141_493872                          1195 2 +      5897 ac
i Hylobates_abbotti.k141_493872                     C 0 C 0
s Hylobates_agilis.k141_282275                            408 2 +      1846 ac
i Hylobates_agilis.k141_282275                      n 2 I 50
s Hylobates_klossii.k141_466549                          7653 2 +     11537 ac
i Hylobates_klossii.k141_466549                     C 0 C 0
s Hylobates_muelleri.k141_1133650                         630 2 -      2775 ac
i Hylobates_muelleri.k141_1133650                   C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                 2260 2 +     22540 ac
i Hystrix_cristata.HysCri_scaffold_50788            C 0 I 3
s Ictidomys_tridecemlineatus.JH393315.1               7122096 2 +  13083262 at
i Ictidomys_tridecemlineatus.JH393315.1             C 0 I 3
s Indri_indri.k141_3334527                               8268 2 +      9207 at
i Indri_indri.k141_3334527                          I 20 C 0
s Lagothrix_lagothricha.k141_12968                      46112 2 -    147782 ac
i Lagothrix_lagothricha.k141_12968                  C 0 C 0
s Lemur_catta.scaffold_1                            258403308 2 - 285822530 at
i Lemur_catta.scaffold_1                            I 20 C 0
s Lepilemur_ankaranensis.k141_884009                    20201 2 +     39228 at
i Lepilemur_ankaranensis.k141_884009                I 18 C 0
s Lepilemur_dorsalis.k141_134267                        49580 2 +     63517 at
i Lepilemur_dorsalis.k141_134267                    I 18 C 0
s Lepilemur_ruficaudatus.k141_617879                    74797 2 +    116806 at
i Lepilemur_ruficaudatus.k141_617879                I 18 C 0
s Lepilemur_septentrionalis.k141_578524                 27837 2 -     33031 at
i Lepilemur_septentrionalis.k141_578524             I 18 C 0
s Lophocebus_aterrimus.ctg55                         19243897 2 +  19376315 ac
i Lophocebus_aterrimus.ctg55                        C 0 C 0
s Loris_lydekkerianus.k141_550999                        6810 2 +     84689 at
i Loris_lydekkerianus.k141_550999                   C 0 C 0
s Loris_tardigradus.ctg97                             3774569 2 +   6799190 at
i Loris_tardigradus.ctg97                           C 0 C 0
s Macaca_arctoides.k141_2201161                         15584 2 +     74745 ac
i Macaca_arctoides.k141_2201161                     C 0 C 0
s Macaca_assamensis.Contig65                         12702090 2 +  12821369 ac
i Macaca_assamensis.Contig65                        C 0 C 0
s Macaca_cyclopis.k119_1168412                           4183 2 +      6569 ac
i Macaca_cyclopis.k119_1168412                      C 0 C 0
s Macaca_fascicularis.k141_155037                       42483 2 +     63263 ac
i Macaca_fascicularis.k141_155037                   C 0 C 0
s Macaca_fuscata.k119_1068107                           11060 2 +     12679 ac
i Macaca_fuscata.k119_1068107                       C 0 C 0
s Macaca_leonina.k141_3421209                             633 2 +      3017 ac
i Macaca_leonina.k141_3421209                       C 0 C 0
s Macaca_maura.k141_251854                              42245 2 -     79256 ac
i Macaca_maura.k141_251854                          C 0 C 0
s Macaca_mulatta.NC_041755.1                        196031165 2 + 196197964 ac
i Macaca_mulatta.NC_041755.1                        C 0 C 0
s Macaca_nemestrina.KQ004885.1                       11441269 2 +  11645122 ac
i Macaca_nemestrina.KQ004885.1                      C 0 C 0
s Macaca_nigra.k141_282495                               1195 2 -     46448 ac
i Macaca_nigra.k141_282495                          C 0 C 0
s Macaca_radiata.k141_1580474                            1022 2 -      3617 ac
i Macaca_radiata.k141_1580474                       C 0 C 0
s Macaca_siberu.k141_741907                             11355 2 -     55006 ac
i Macaca_siberu.k141_741907                         C 0 C 0
s Macaca_silenus.Contig12                            43836394 2 +  43892939 ac
i Macaca_silenus.Contig12                           C 0 C 0
s Macaca_thibetana.k99_116940                            3617 2 -      5978 ac
i Macaca_thibetana.k99_116940                       C 0 C 0
s Macaca_tonkeana.k141_2870633                           1197 2 -     27140 ac
i Macaca_tonkeana.k141_2870633                      C 0 C 0
s Mandrillus_leucophaeus.scaffold125                 43433058 2 -  43563597 ac
i Mandrillus_leucophaeus.scaffold125                C 0 C 0
s Mandrillus_sphinx.Contig144                         4445884 2 -   4543643 ac
i Mandrillus_sphinx.Contig144                       C 0 C 0
s Marmota_marmota.CZRN01000005.1                     36869940 2 +  64221397 ac
i Marmota_marmota.CZRN01000005.1                    C 0 I 3
s Meriones_unguiculatus.MerUng_scaffold_52233            7840 2 +     15977 ac
i Meriones_unguiculatus.MerUng_scaffold_52233       C 0 I 3
s Mesocricetus_auratus.KB708139.1                     1042788 2 -  26018355 ac
i Mesocricetus_auratus.KB708139.1                   C 0 I 3
s Microcebus_murinus.CM007691.1                      16506420 2 +  47401472 AT
i Microcebus_murinus.CM007691.1                     I 20 C 0
s Microtus_ochrogaster.CM001673.1                    22815151 2 -  98408828 ac
i Microtus_ochrogaster.CM001673.1                   C 0 I 3
s Miopithecus_ogouensis.k141_2666161                    31732 2 +     34273 ac
i Miopithecus_ogouensis.k141_2666161                C 0 C 0
s Mirza_zaza.k141_226143                                 1834 1 +      8497 a-
i Mirza_zaza.k141_226143                            I 20 C 0
s Mus_caroli.LT608236.1                              70761308 2 +  92629107 aa
i Mus_caroli.LT608236.1                             C 0 I 3
s Mus_musculus.chr16                                 75484383 2 +  98207768 ac
i Mus_musculus.chr16                                C 0 I 3
s Mus_pahari.LT608305.1                              67548923 2 +  89017189 ac
i Mus_pahari.LT608305.1                             C 0 I 3
s Mus_spretus.CM004110.1                             74324021 2 +  97876770 ac
i Mus_spretus.CM004110.1                            C 0 I 3
s Muscardinus_avellanarius.MusAve_scaffold_9643          6838 2 +     98495 ac
i Muscardinus_avellanarius.MusAve_scaffold_9643     C 0 I 3
s Nannospalax_galili.KL201303.1                        107115 2 +    362372 ac
i Nannospalax_galili.KL201303.1                     I 19 I 3
s Nasalis_larvatus.k141_153429                           4097 2 +     48152 ac
i Nasalis_larvatus.k141_153429                      C 0 C 0
s Nomascus_concolor.k141_463898                          1709 2 +      1817 AC
i Nomascus_concolor.k141_463898                     C 0 I 4
s Nycticebus_bengalensis.LG16                        65563158 2 -  95554990 at
i Nycticebus_bengalensis.LG16                       C 0 C 0
s Nycticebus_coucang.k141_7268257                        2173 2 -      2537 at
i Nycticebus_coucang.k141_7268257                   C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17  65665518 2 +  89412551 at
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17 C 0 C 0
s Octodon_degus.JH651621.1                            3674579 2 +  10294119 aa
i Octodon_degus.JH651621.1                          I 22 I 3
s Ondatra_zibethicus.OndZib_scaffold_6821              120801 2 +    145789 ac
i Ondatra_zibethicus.OndZib_scaffold_6821           C 0 I 3
s Onychomys_torridus.OnyTor_scaffold_12578              32913 2 +     62360 AT
i Onychomys_torridus.OnyTor_scaffold_12578          C 0 I 3
s Pan_paniscus.CM003386.1                           127570728 2 - 205426864 AC
i Pan_paniscus.CM003386.1                           C 0 C 0
s Pan_troglodytes.CM009241.2                        120147875 2 - 196562556 AC
i Pan_troglodytes.CM009241.2                        C 0 I 50
s Papio_anubis.CM001492.2                           188151842 2 - 188283584 ac
i Papio_anubis.CM001492.2                           C 0 C 0
s Papio_cynocephalus.k141_386926                        48054 2 +     76494 ac
i Papio_cynocephalus.k141_386926                    C 0 C 0
s Papio_hamadryas.Contig15                           47509238 2 +  47705337 ac
i Papio_hamadryas.Contig15                          C 0 C 0
s Papio_kindae.k141_5458022                             63221 2 -    104429 ac
i Papio_kindae.k141_5458022                         C 0 C 0
s Papio_papio.k141_3561084                              13005 2 -     29451 ac
i Papio_papio.k141_3561084                          C 0 C 0
s Papio_ursinus.k141_3762866                            33410 2 +     35859 ac
i Papio_ursinus.k141_3762866                        C 0 C 0
s Perodicticus_ibeanus.k141_117958                       1159 2 -     23713 at
i Perodicticus_ibeanus.k141_117958                  C 0 C 0
s Perodicticus_potto.k141_713187                        20456 2 -     27972 at
i Perodicticus_potto.k141_713187                    C 0 C 0
s Peromyscus_maniculatus.KI615518.1                   4946073 2 -   8017169 AC
i Peromyscus_maniculatus.KI615518.1                 C 0 I 3
s Piliocolobus_badius.k141_1497351                       1098 2 -      3310 ac
i Piliocolobus_badius.k141_1497351                  C 0 C 0
s Piliocolobus_gordonorum.k141_902470                   21004 2 -     82327 ac
i Piliocolobus_gordonorum.k141_902470               C 0 C 0
s Piliocolobus_kirkii.k141_557609                       17755 2 +     19957 ac
i Piliocolobus_kirkii.k141_557609                   C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1           26735764 2 +  26888534 ac
i Piliocolobus_tephrosceles.PDMG02000036.1          C 0 C 0
s Pithecia_albicans.k141_991845                         39639 2 -     61926 ac
i Pithecia_albicans.k141_991845                     C 0 C 0
s Pithecia_chrysocephala.k141_159118                    21068 2 +     78826 ac
i Pithecia_chrysocephala.k141_159118                C 0 C 0
s Pithecia_hirsuta.k141_1152968                          5019 2 -     15800 ac
i Pithecia_hirsuta.k141_1152968                     C 0 C 0
s Pithecia_mittermeieri.k141_2119203                     8217 2 -     16101 ac
i Pithecia_mittermeieri.k141_2119203                C 0 C 0
s Pithecia_pissinattii.k141_1102319                      1526 2 +      9673 ac
i Pithecia_pissinattii.k141_1102319                 C 0 C 0
s Pithecia_pithecia.tarseq_313                       13470520 2 -  19735023 ac
i Pithecia_pithecia.tarseq_313                      C 0 C 0
s Pithecia_vanzolinii.k141_831006                        9428 2 -     31692 ac
i Pithecia_vanzolinii.k141_831006                   C 0 C 0
s Plecturocebus_bernhardi.k141_959214                   18792 2 +     44506 ac
i Plecturocebus_bernhardi.k141_959214               C 0 C 0
s Plecturocebus_brunneus.k141_498086                    19010 2 +     67491 ac
i Plecturocebus_brunneus.k141_498086                C 0 C 0
s Plecturocebus_caligatus.k141_2539816                   9255 2 -     98129 ac
i Plecturocebus_caligatus.k141_2539816              C 0 C 0
s Plecturocebus_cinerascens.k141_744510                 18855 2 +    147771 ac
i Plecturocebus_cinerascens.k141_744510             C 0 C 0
s Plecturocebus_cupreus.k141_1223294                    19106 2 -     23762 ac
i Plecturocebus_cupreus.k141_1223294                C 0 C 0
s Plecturocebus_dubius.k141_2078842                     19054 2 -     19696 ac
i Plecturocebus_dubius.k141_2078842                 C 0 C 0
s Plecturocebus_grovesi.k141_242819                     18928 2 +    152463 ac
i Plecturocebus_grovesi.k141_242819                 C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                  5685 2 +      8943 ac
i Plecturocebus_hoffmannsi.k141_1595076             C 0 C 0
s Plecturocebus_miltoni.k141_841561                      8645 2 +    134592 ac
i Plecturocebus_miltoni.k141_841561                 C 0 C 0
s Plecturocebus_moloch.k141_890597                      19238 2 -     75465 ac
i Plecturocebus_moloch.k141_890597                  C 0 C 0
s Pongo_abelii.NDHI03003816.1                          183282 2 -    373494 ac
i Pongo_abelii.NDHI03003816.1                       C 0 C 0
s Pongo_pygmaeus.ctg62                               19803184 2 +  19899266 ac
i Pongo_pygmaeus.ctg62                              C 0 C 0
s Presbytis_comata.k141_672698                           1334 2 -     15069 ac
i Presbytis_comata.k141_672698                      C 0 C 0
s Presbytis_mitrata.k141_860013                          1468 2 +     14865 gc
i Presbytis_mitrata.k141_860013                     I 11 C 0
s Prolemur_simus.MPIZ01000048.1                       6844681 2 +  12164890 at
i Prolemur_simus.MPIZ01000048.1                     I 14 C 0
s Propithecus_coquerelli.NW_012147997.1                663961 2 -   2312742 AT
i Propithecus_coquerelli.NW_012147997.1             I 20 C 0
s Propithecus_coronatus.k141_844990                     30713 2 +     30823 at
i Propithecus_coronatus.k141_844990                 I 20 C 0
s Propithecus_diadema.k141_577245                       39150 2 +     52369 at
i Propithecus_diadema.k141_577245                   I 17 C 0
s Propithecus_edwardsi.k141_1317105                     31539 2 -     44753 at
i Propithecus_edwardsi.k141_1317105                 I 17 C 0
s Propithecus_perrieri.k141_7554                        13461 2 +     27322 at
i Propithecus_perrieri.k141_7554                    I 17 C 0
s Propithecus_tattersalli.k141_907138                   13105 2 -     53241 at
i Propithecus_tattersalli.k141_907138               I 20 C 0
s Propithecus_verreauxi.k141_158021                     35376 2 -     48185 at
i Propithecus_verreauxi.k141_158021                 I 20 C 0
s Psammomys_obesus.NESX01026517.1                       28901 2 +     77221 ac
i Psammomys_obesus.NESX01026517.1                   C 0 I 3
s Pygathrix_cinerea.k141_374971                         25459 2 +     56732 ac
i Pygathrix_cinerea.k141_374971                     C 0 C 0
s Pygathrix_nigripes_b.ctg79                             6801949 2 +   6970761 ac
i Pygathrix_nigripes_b.ctg79                           C 0 C 0
s Pygathrix_nigripes_a.k141_101123                         1341 2 +     18040 ac
i Pygathrix_nigripes_a.k141_101123                    C 0 C 0
s Rattus_norvegicus.chr11                            13910845 2 +  90463843 CC
i Rattus_norvegicus.chr11                           C 0 I 3
s Rhinopithecus_bieti.k119_102124                       11896 2 -     14454 ac
i Rhinopithecus_bieti.k119_102124                   C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1               206373222 2 - 206558726 ac
i Rhinopithecus_roxellana.NC_044549.1               C 0 C 0
s Rhinopithecus_strykeri.ctg4                        44850870 2 -  45163003 ac
i Rhinopithecus_strykeri.ctg4                       C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                 15668663 2 -  43202129 ac
i Saimiri_boliviensis.NW_024100938.1                C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                     538 2 +     34089 ac
i Saimiri_cassiquiarensis.k141_808270               C 0 C 0
s Saimiri_macrodon.k141_2087127                           469 2 -     60842 ac
i Saimiri_macrodon.k141_2087127                     C 0 C 0
s Saimiri_oerstedii.k141_841116                           538 2 +     67014 ac
i Saimiri_oerstedii.k141_841116                     C 0 C 0
s Saimiri_sciureus.k141_1947592                           538 2 +     60816 ac
i Saimiri_sciureus.k141_1947592                     C 0 C 0
s Saimiri_ustus.k141_1282476                              466 2 -     76454 ac
i Saimiri_ustus.k141_1282476                        C 0 C 0
s Sapajus_apella.ctg10                               17337046 2 -  30362882 ac
i Sapajus_apella.ctg10                              C 0 C 0
s Sapajus_macrocephalus.k141_966464                     16647 2 -     62485 ac
i Sapajus_macrocephalus.k141_966464                 C 0 C 0
s Semnopithecus_entellus.k141_1527475                   23884 2 +     26421 ac
i Semnopithecus_entellus.k141_1527475               C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                   4346 2 +     20762 ac
i Semnopithecus_hypoleucos.k141_761524              C 0 C 0
s Semnopithecus_johnii.k141_1351450                     38079 2 +     40653 ac
i Semnopithecus_johnii.k141_1351450                 C 0 C 0
s Semnopithecus_priam.k141_198153                        8638 2 -     12194 ac
i Semnopithecus_priam.k141_198153                   C 0 C 0
s Semnopithecus_schistaceus.k141_653647                 22057 2 -     27512 ac
i Semnopithecus_schistaceus.k141_653647             C 0 C 0
s Semnopithecus_vetulus.k141_642050                     31078 2 -     33692 ac
i Semnopithecus_vetulus.k141_642050                 C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332               94181 2 -    120886 CC
i Sigmodon_hispidus.SigHis_scaffold_11332           I 16 I 3
s Spermophilus_dauricus.KZ294190.1                    2236022 2 +   2842873 ac
i Spermophilus_dauricus.KZ294190.1                  C 0 I 3
s Symphalangus_syndactylus.tarseq_24                 13898008 2 +  13920577 ac
i Symphalangus_syndactylus.tarseq_24                I 68 I 50
s Tarsius_lariang.k141_609102                           22792 2 +     42269 ac
i Tarsius_lariang.k141_609102                       C 0 C 0
s Tarsius_wallacei.k141_48636                           56100 2 +     65473 ac
i Tarsius_wallacei.k141_48636                       C 0 C 0
s Theropithecus_gelada.CM009951.1                   194003378 2 - 194193292 ac
i Theropithecus_gelada.CM009951.1                   C 0 C 0
s Trachypithecus_auratus.k141_738098                    22456 2 +     38948 ac
i Trachypithecus_auratus.k141_738098                C 0 C 0
s Trachypithecus_crepusculus.k141_1588528               16183 2 -     32910 ac
i Trachypithecus_crepusculus.k141_1588528           C 0 C 0
s Trachypithecus_cristatus.k141_27198                   22081 2 +     24652 ac
i Trachypithecus_cristatus.k141_27198               C 0 C 0
s Trachypithecus_francoisi.k141_1178450                   966 2 -      3559 ac
i Trachypithecus_francoisi.k141_1178450             C 0 C 0
s Trachypithecus_geei.k141_670367                       38905 2 -     54611 ac
i Trachypithecus_geei.k141_670367                   C 0 C 0
s Trachypithecus_germaini.k141_809503                   14904 2 +     17312 ac
i Trachypithecus_germaini.k141_809503               C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                22274 2 -     25040 ac
i Trachypithecus_hatinhensis.k141_357672            C 0 C 0
s Trachypithecus_laotum.k141_171445                       940 2 +      3528 ac
i Trachypithecus_laotum.k141_171445                 C 0 C 0
s Trachypithecus_leucocephalus.k141_283605              47302 2 +     51589 ac
i Trachypithecus_leucocephalus.k141_283605          C 0 C 0
s Trachypithecus_melamera.k141_238507                   10470 2 +     14732 ac
i Trachypithecus_melamera.k141_238507               C 0 C 0
s Trachypithecus_obscurus.k141_1115109                    948 2 -     28054 ac
i Trachypithecus_obscurus.k141_1115109              C 0 C 0
s Trachypithecus_phayrei.ctg3                        44655743 2 -  44834318 ac
i Trachypithecus_phayrei.ctg3                       C 0 C 0
s Trachypithecus_pileatus.k141_469329                     753 2 +      3372 ac
i Trachypithecus_pileatus.k141_469329               C 0 C 0
s Tupaia_chinensis.KB320831.1                         2786005 2 -   3938065 at
i Tupaia_chinensis.KB320831.1                       C 0 I 209
s Tupaia_tana.TupTan_flattened_line_251551               4401 2 -      5019 at
i Tupaia_tana.TupTan_flattened_line_251551          C 0 I 191
s Varecia_rubra.k141_432109                              1627 2 -     20643 ac
i Varecia_rubra.k141_432109                         I 20 C 0
s Varecia_variegata.k141_775891                         21172 2 -     33872 ac
i Varecia_variegata.k141_775891                     I 20 C 0
s Xerus_inauris.XerIna_scaffold_7898                   123195 2 -    134049 at
i Xerus_inauris.XerIna_scaffold_7898                C 0 I 3
e Otolemur_garnettii.GL873528.1                      18004869 68 -  38779656 I
e Otolemur_crassicaudatus.k141_321880                   35431 68 +     38679 I
e Myocastor_coypus.MyoCoy_scaffold_3653                 86027 24 -    117718 I
e Graphiurus_murinus.GraMur_scaffold_4493               73526 2 +    118900 I
e Galagoides_demidoff.k141_1769638                       6763 68 +     27357 I
e Galago_senegalensis.k141_964197                        9743 68 -     43889 I
e Galago_moholi.ctg555                                 207363 68 -    847004 I
e Nomascus_siki_b.tarseq_80                         20456 0 -  18771707 C
e Nomascus_annamensis.k141_745421                         374 0 -      4569 C
e Nomascus_gabriellae.k141_1350167                        785 0 +      9928 C

a score=0.000000
s hg38.chr4_GL000008v2_random                            7996 50 +    209709 Aa-t-----a-aatatt---------aatacc-tacag-tcctcatgttgta-c---attagat-cc-ctcaa---t
s Acomys_cahirinus.AcoCah_scaffold_1625                108397 42 -    189883 --------------GCT---------ATTCAC-TATGG-TCTCCAT-TTGTA-A---ATTAGAG-TT-CTAGA---C
i Acomys_cahirinus.AcoCah_scaffold_1625             I 3 C 0
s Allactaga_bullata.AllBul_scaffold_70162                8711 19 -     22067 -------------------------------------------------ATA-C---TAATGCT-CT-CTAGA---C
i Allactaga_bullata.AllBul_scaffold_70162           N 0 C 0
s Allenopithecus_nigroviridis.k141_3103707              59018 50 +     61638 aa-t-----a-aatatt---------aatatc-tacag-ttctcatgttgta-c---attagat-cc-ctcaa---c
i Allenopithecus_nigroviridis.k141_3103707          C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                    50826 50 +     53391 aa-t-----a-aatatt---------aatacc-tacag-tcctcatgttgta-c---attagat-cc-ctcaa---c
i Allochrocebus_lhoesti.k141_4825038                C 0 C 0
s Allochrocebus_preussi.k141_1202907                     1550 50 +     72529 aa-t-----a-aatatt---------aatacc-tacag-tcctcatgttgta-c---attagat-cc-ctcaa---c
i Allochrocebus_preussi.k141_1202907                C 0 C 0
s Allochrocebus_solatus.k141_787528                      1127 50 +      3797 aa-t-----a-aatatt---------aatacc-tacag-tcctcatgttgta-c---attagat-cc-ctcaa---c
i Allochrocebus_solatus.k141_787528                 C 0 C 0
s Alouatta_belzebul.k141_1818029                         6212 50 -     18050 aa-t-----a-aatatt---------aatacc-tacag-tcttcatgttgta-c---attagat-ac-ctcaa---c
i Alouatta_belzebul.k141_1818029                    C 0 C 0
s Alouatta_caraya.k141_5460                              7329 50 -     11521 aa-t-----a-aatatt---------aatacc-tacag-tcttcatgttgta-c---attagat-ac-ctcaa---c
i Alouatta_caraya.k141_5460                         C 0 C 0
s Alouatta_discolor.k141_811576                          6887 50 -     21359 aa-t-----a-aatatt---------aatacc-tacag-tcctcatgttgta-c---attagat-ac-ctcaa---c
i Alouatta_discolor.k141_811576                     C 0 C 0
s Alouatta_juara.k141_1856473                            5270 50 +      7227 aa-t-----a-aatatt---------aatacc-tacag-tcctcaagttgta-c---attagat-ac-ctcaa---c
i Alouatta_juara.k141_1856473                       C 0 C 0
s Alouatta_macconnelli.k141_1331706                      6185 50 -     10438 aa-t-----a-aatagt---------aatacc-tacag-tcctcatgttgta-c---attagat-ac-ctcaa---c
i Alouatta_macconnelli.k141_1331706                 C 0 C 0
s Alouatta_nigerrima.k141_2718643                        2839 50 +      7047 aa-t-----a-aatagt---------aatacc-tacag-tcctcatgttgta-c---attagat-ac-ctcaa---c
i Alouatta_nigerrima.k141_2718643                   C 0 C 0
s Alouatta_palliata.k141_1316127                         6123 50 +     10410 aa-t-----a-aatatt---------aatacc-tacag-tcttcatgttgta-c---attagat-ac-ctcaa---c
i Alouatta_palliata.k141_1316127                    C 0 C 0
s Alouatta_puruensis.k141_390786                         7400 50 -      7615 aa-t-----a-aatatt---------aatacc-tacag-tcctcatgttgta-c---attagat-ac-ctcaa---c
i Alouatta_puruensis.k141_390786                    C 0 C 0
s Alouatta_seniculus.k141_990213                         2844 50 +      6429 aa-t-----a-aatatt---------aatacc-tacag-tcttcatgttgta-c---attagat-ac-ctcaa---c
i Alouatta_seniculus.k141_990213                    C 0 C 0
s Aotus_azarae.k141_3170768                             58527 50 +     78111 aa-t-----a-aatatt---------aatacc-tacag-tcctcatgttgta-c---gttagat-cc-ctcaa---c
i Aotus_azarae.k141_3170768                         C 0 C 0
s Aotus_griseimembra.k141_3275623                        1458 50 +     22701 aa-t-----a-aatatt---------aatacc-tacag-tcctcatgttgta-c---gttagat-cc-ctcaa---c
i Aotus_griseimembra.k141_3275623                   C 0 C 0
s Aotus_nancymaae.KZ196176.1                          5745418 50 +   9889416 ag-t-----a-aatatt---------aatACc-tacag-tcctcatgttgta-c---gttagat-cc-ctcaa---c
i Aotus_nancymaae.KZ196176.1                        C 0 C 0
s Aotus_trivirgatus.k141_1740727                         2010 50 -    104377 aa-t-----a-aatatt---------aatacc-tacag-tcctcatgttgta-c---attagat-cc-ctcaa---c
i Aotus_trivirgatus.k141_1740727                    C 0 C 0
s Aotus_vociferans.k141_718647                           2010 50 +     23246 aa-t-----a-aatatt---------aatacc-tacag-tcctcatgttgta-c---attagat-cc-ctcaa---c
i Aotus_vociferans.k141_718647                      C 0 C 0
s Arctocebus_calabarensis.k141_1161114                  14313 50 +     17483 at-t-----ataacatt---------gttacctgta-g-ttgtc-cgttgc-ac---attgcagccc-tag-a---c
i Arctocebus_calabarensis.k141_1161114              C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                         9535271 50 +  39197703 aa-t-----a-aatatt---------aatacc-tacag-tcctcatgttgta-c---attagat-ac-ctcaa---c
i Ateles_geoffroyi_b.tarseq_2582                       C 0 C 0
s Ateles_belzebuth.k141_1348307                         56559 50 +     85812 ca-t-----a-aatatt---------aacacc-tacag-tcctcatgttgta-c---attagat-ac-ctcaa---c
i Ateles_belzebuth.k141_1348307                     C 0 C 0
s Ateles_chamek.k141_1072810                             7556 50 +     89302 ca-t-----a-aatatt---------aacacc-tacag-tcctcatgttgta-c---attagat-ac-ctcaa---c
i Ateles_chamek.k141_1072810                        C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                         12065 50 -     58268 aa-t-----a-aatatt---------aatacc-tacag-tcctcatgttgta-c---attagat-ac-ctcaa---c
i Ateles_geoffroyi_a.k141_1300742                     C 0 C 0
s Ateles_marginatus.k141_899112                         60053 50 +    119057 ca-t-----a-aatatt---------aacacc-tacag-tcctcatgttgta-c---attagat-ac-ctcaa---c
i Ateles_marginatus.k141_899112                     C 0 C 0
s Ateles_paniscus.k141_1631200                           2004 50 -     25888 ca-t-----a-aatatt---------aacacc-tacag-tcctcatgttgta-c---attagat-ac-ctcaa---c
i Ateles_paniscus.k141_1631200                      C 0 C 0
s Avahi_laniger.k141_2840928                             2869 54 -     16375 ga-t-----accgtatt---------attacc-tgcag-tcctcatgttgtt-cattattagca-cc-ttaga---c
i Avahi_laniger.k141_2840928                        C 0 C 0
s Avahi_peyrierasi.k141_767228                           8842 54 -      9688 ga-t-----accgtatt---------attacc-tgcag-tcctcatgttgtt-cattattagca-cc-ttaga---c
i Avahi_peyrierasi.k141_767228                      C 0 C 0
s Cacajao_ayresi.k141_724503                           109928 50 -    171031 aa-t-----a-aatatt---------aatacc-tacag-tcctcatgctgta-c---attagat-ac-ctcaa---c
i Cacajao_ayresi.k141_724503                        C 0 C 0
s Cacajao_calvus.k141_96166                              8954 50 +    125063 aa-t-----a-aatatt---------aatacc-tacag-tcctcatgctgta-c---attagat-ac-ctcaa---c
i Cacajao_calvus.k141_96166                         C 0 C 0
s Cacajao_hosomi.k141_303789                            11002 50 -    216513 aa-t-----a-aatatt---------aatacc-tacag-tcctcatgctgta-c---attagat-ac-ctcaa---c
i Cacajao_hosomi.k141_303789                        C 0 C 0
s Cacajao_melanocephalus.k141_1160263                    3541 50 -    134917 aa-t-----a-aatatt---------aatacc-tacag-tcctcatgctgta-c---attagat-ac-ctcaa---c
i Cacajao_melanocephalus.k141_1160263               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_647363               301 42 +      1887 --------------agt---------attaac-tata--cttttgtgtaatg-t---attagtt-ct-ctaga---a
i Capromys_pilorides.CapPil_scaffold_647363         I 3 C 0
s Carlito_syrichta.NW_007248099.1                      305309 51 +    345090 aa-t-----acaatatt---------attacc-AATAG-TCCTCATGTTGGT-C---GTTAGAA-TC-CTAGA---C
i Carlito_syrichta.NW_007248099.1                   C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037               26865 43 +     33760 --------------att---------attaac-tacag-tccttcttttgta-c---attagat-at-ctgca---c
i Castor_canadensis.CasCan_scaffold_47037           I 3 C 0
s Cavia_aperea.AVPZ01000278.1                        15783599 43 -  24422027 --------------att---------attaac-tacaa-tctttgtgctttg-t---gtgagtt-ct-ctata---t
i Cavia_aperea.AVPZ01000278.1                       I 3 C 0
s Cavia_porcellus.DS562889.1                         15795533 43 -  24440124 --------------att---------attaac-tacag-tctttgtgctttg-t---gtgagtt-ct-ctata---t
i Cavia_porcellus.DS562889.1                        I 3 C 0
s Cavia_tschudii.CavTsc_scaffold_488                   173724 43 +    436027 --------------att---------attaac-tacag-tctttgtgctttg-t---gtgagtt-ct-ctata---t
i Cavia_tschudii.CavTsc_scaffold_488                I 3 C 0
s Cebus_albifrons.Contig22                           18886739 50 -  29618158 aa-t-----a-aatatt---------aatacc-tacag-tcctcatgttgta-c---gttagat-ac-ctcaa---c
i Cebus_albifrons.Contig22                          C 0 C 0
s Cebus_olivaceus.k141_93739                             4285 50 -     26817 aa-t-----a-aatatt---------aatacc-tacag-tcctcatgttgta-c---gttagat-ac-ctcaa---c
i Cebus_olivaceus.k141_93739                        C 0 C 0
s Cebus_unicolor.k141_239009                             8525 50 +     25043 aa-t-----a-aatatt---------aatacc-tacag-tcctcatgttgta-c---gttagat-ac-ctcaa---c
i Cebus_unicolor.k141_239009                        C 0 C 0
s Cephalopachus_bancanus.k141_702587                     4345 51 +     21754 aa-t-----acaatatt---------attacc-aatag-tcctcatgttggt-g---gttagaa-tc-ctaga---c
i Cephalopachus_bancanus.k141_702587                C 0 C 0
s Cercocebus_atys.KQ010443.1                          6550814 50 +   6739814 aa-t-----a-aatatt---------aatacc-tacag-tcctcatgttgta-c---attagat-cc-cTCAA---C
i Cercocebus_atys.KQ010443.1                        C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                  52291 50 -     54931 aa-t-----a-aatatt---------aatacc-tacag-tcctcatgttgta-c---attagat-cc-ctcaa---c
i Cercocebus_chrysogaster.k141_2951608              C 0 C 0
s Cercocebus_lunulatus.k141_3387186                     17275 50 -     19697 aa-t-----a-aatatt---------aatacc-tacag-tcctcatgttgta-c---attagat-cc-ctcaa---c
i Cercocebus_lunulatus.k141_3387186                 C 0 C 0
s Cercocebus_torquatus.k141_3969582                     54806 50 -    107033 aa-t-----a-aatatt---------aatacc-tacag-tcctcatgttgta-c---attagat-cc-ctcaa---c
i Cercocebus_torquatus.k141_3969582                 C 0 C 0
s Cercopithecus_ascanius.k141_3371259                    1249 50 -      3853 aa-t-----a-aatatt---------aatacc-tacag-tcctcatgttgta-c---attagat-cc-ctcaa---c
i Cercopithecus_ascanius.k141_3371259               C 0 C 0
s Cercopithecus_cephus.k141_598190                      25181 50 +     30494 aa-t-----a-aatatt---------aatacc-tacag-tcctcatgttgta-c---attagat-cc-ctcaa---c
i Cercopithecus_cephus.k141_598190                  C 0 C 0
s Cercopithecus_diana.k141_1490386                       1204 50 -      4022 aa-t-----a-aatatt---------aatacc-tacag-tcctcatgttgta-c---attagat-cc-ctcaa---c
i Cercopithecus_diana.k141_1490386                  C 0 C 0
s Cercopithecus_hamlyni.k141_381099                      1094 50 -      3505 aa-t-----a-aatatt---------aatacc-tacag-tcctcatgttgta-c---attagat-cc-ctcaa---c
i Cercopithecus_hamlyni.k141_381099                 C 0 C 0
s Cercopithecus_lowei.k141_623764                       19905 50 +     35983 aa-t-----a-aatatt---------aatacc-tacag-tcctcatgttgta-c---attagat-cc-ctcaa---c
i Cercopithecus_lowei.k141_623764                   C 0 C 0
s Cercopithecus_albogularis.ctg51                          11985681 50 +  12117833 aa-t-----a-aatatt---------aatacc-tacag-tcctcatgttgta-c---attagat-cc-ctcaa---c
i Cercopithecus_albogularis.ctg51                         C 0 C 0
s Cercopithecus_mona.ctg12                           46473177 50 +  46592721 aa-t-----a-aatatt---------aatacc-tacag-tcctcatgttgta-c---attagat-cc-ctcaa---c
i Cercopithecus_mona.ctg12                          C 0 C 0
s Cercopithecus_neglectus.k141_1474992                  31004 50 +     33420 aa-t-----a-aatatt---------aatacc-tacag-tcctcatgttgta-c---attagat-cc-ctcaa---c
i Cercopithecus_neglectus.k141_1474992              C 0 C 0
s Cercopithecus_nictitans.k141_675209                    1040 50 -      3443 aa-t-----a-aatatt---------aatacc-tacag-tcctcatgttgta-c---attagat-cc-ctcaa---c
i Cercopithecus_nictitans.k141_675209               C 0 C 0
s Cercopithecus_petaurista.k141_2037881                  2031 50 -      4669 aa-t-----a-aatatt---------aatacc-tacag-tcctcatgttgta-c---attagat-cc-ctcaa---c
i Cercopithecus_petaurista.k141_2037881             C 0 C 0
s Cercopithecus_pogonias.k141_1977419                    1835 50 -      4411 aa-t-----a-aatatt---------aatacc-tacag-tcctcatgttgta-c---attagat-cc-ctcaa---c
i Cercopithecus_pogonias.k141_1977419               C 0 C 0
s Cercopithecus_roloway.k141_3372345                     1355 50 -      4205 aa-t-----a-aatatt---------aatacc-tacag-tcctcatgttgta-c---attagat-cc-ctcaa---c
i Cercopithecus_roloway.k141_3372345                C 0 C 0
s Cheirogaleus_major.k141_1157592                       55216 43 -     68416 --------------att---------attgcc-tgcag-tcctcatgttgta-c---attagtg-ct-ctaga---c
i Cheirogaleus_major.k141_1157592                   I 5 C 0
s Cheirogaleus_medius.k141_133808                        4266 43 +     13308 --------------att---------attgcc-tgcag-tcctcatgttgta-c---attagtg-ct-ctaga---c
i Cheirogaleus_medius.k141_133808                   I 5 C 0
s Cheracebus_lucifer.k141_619653                         1538 50 -     18223 aa-t-----a-aatatt---------aatacc-tgcag-tgctcatgttgta-c---attagat-ac-ctcaa---c
i Cheracebus_lucifer.k141_619653                    C 0 C 0
s Cheracebus_lugens.k141_203936                         18561 50 +     25473 aa-t-----a-aatatt---------aatacc-tgcag-tgctcatgttgta-c---attagat-ac-ctcaa---c
i Cheracebus_lugens.k141_203936                     C 0 C 0
s Cheracebus_regulus.k141_2128895                       37600 50 +     57117 aa-t-----a-aatatt---------aatacc-tgcag-tgctcatgttgta-c---attagat-ac-ctcaa---c
i Cheracebus_regulus.k141_2128895                   C 0 C 0
s Cheracebus_torquatus.k141_315545                      42275 50 +     54541 aa-t-----a-aatatt---------aatacc-tgcag-tgctcatgttgta-c---attagat-ac-ctcaa---c
i Cheracebus_torquatus.k141_315545                  C 0 C 0
s Chinchilla_lanigera.JH721867.1                     15957726 43 +  43084221 --------------att---------atttac-tatag-cctttgtgttatg-t---attagtt-ct-ctaga---c
i Chinchilla_lanigera.JH721867.1                    I 3 C 0
s Chiropotes_israelita.k141_1189915                     67149 50 +    196370 aa-t-----a-aatatt---------aatacc-tacag-tcctcatgctgta-c---attagat-ac-ctcaa---c
i Chiropotes_israelita.k141_1189915                 C 0 C 0
s Chiropotes_sagulatus.k141_773804                      11323 50 +     40510 aa-t-----a-aatatt---------aatacc-tacag-tcctcatgctgta-c---atttgtt-tc-ctaaa---c
i Chiropotes_sagulatus.k141_773804                  C 0 C 0
s Chlorocebus_aethiops.ctg22                         15134635 50 -  15256731 aa-t-----a-aatatt---------aatacc-tacag-tcctcatgttgta-c---attagat-cc-ctcaa---c
i Chlorocebus_aethiops.ctg22                        C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                  29681 50 -     53260 aa-t-----a-aatatt---------aatacc-tacag-tcctcatgttgta-c---attagat-cc-ctcaa---c
i Chlorocebus_pygerythrus.k141_1486215              C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                    101140129 50 + 101219884 aa-t-----a-aatatt---------aatacc-tacag-tcctcatgttgta-c---attagat-cc-ctCAA---C
i Chlorocebus_sabaeus.CM001963.2                    C 0 C 0
s Colobus_angolensis.KN985967.1                      10878711 50 +  10971483 aa-t-----a-aatatt---------aatacc-tacag-tcctcacgttgta-c---attagat-cc-ctcaa---c
i Colobus_angolensis.KN985967.1                     C 0 C 0
s Colobus_guereza.LG08                              147659870 50 + 156195979 aa-t-----a-aatatt---------aatacc-tacag-tcctcacgttgta-c---attagat-cc-ctcaa---c
i Colobus_guereza.LG08                              C 0 C 0
s Colobus_polykomos.k141_1406057                        11855 50 +     23629 aa-t-----a-aatatt---------aatacc-tacag-tcctcacgttgta-c---attagat-cc-ctcaa---c
i Colobus_polykomos.k141_1406057                    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949             273833 43 -    399297 --------------ctt---------atttgt-tgtgg-tcctcatgttgta-t---attagat-tt-ctaga---t
i Cricetomys_gambianus.CriGam_scaffold_949          I 3 C 0
s Cricetulus_griseus.LT883672.1                      53025310 43 +  72327488 --------------gtt---------atttgc-tatag-tctccatgtcata-c---attaggt-tt-gtaga---c
i Cricetulus_griseus.LT883672.1                     I 3 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447              204546 43 -    956709 --------------ATC---------ACTAGC-TAGAG-CTTTCAGATTGTA-C---GTTAGCT-CA-TCGGA---C
i Ctenodactylus_gundi.CteGun_scaffold_447           I 3 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489             26460 43 -     67205 --------------att---------gttaat-gatag-cttttgtgttatg-t---attagtt-ct-ctaga---a
i Ctenomys_sociabilis.CteSoc_scaffold_19489         I 3 C 0
s Cuniculus_paca.CunPac_flattened_line_16637            14478 43 +     26546 --------------att---------attaac-tatag-cctttgtgttatg-t---atgagtt-ct-ctata---c
i Cuniculus_paca.CunPac_flattened_line_16637        I 3 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634         55951 43 -    236241 --------------att---------attaac-tatag-cctttgcattatg-t---acgagtt-ct-ctata---c
i Dasyprocta_punctata.DasPun_flattened_line_634     I 3 C 0
s Daubentonia_madagascariensis.ctg11                 16841071 51 +  31942871 aa-t-----acaatatt---------attacc-tgtag-tcctcatgttgta-c---attagtg-cc-ctaga---c
i Daubentonia_madagascariensis.ctg11                C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102            33111 43 -     73477 --------------att---------attaac-tatag-cctttgtgttatg-t---atgagtt-ct-ctata---t
i Dolichotis_patagonum.DolPat_scaffold_14102        I 3 C 0
s Ellobius_lutescens.LOEQ01003611.1                    235496 43 -    369425 --------------att---------attagc-tatag-tctttctgttgta-c---aattggt-tt-ctaTA---C
i Ellobius_lutescens.LOEQ01003611.1                 I 3 C 0
s Ellobius_talpinus.LOJH01090055.1                       2505 43 -      7838 --------------att---------atttgc-tgtag-tctttcttttgta-c---aattggt-tt-ctaTA---C
i Ellobius_talpinus.LOJH01090055.1                  I 3 C 0
s Erythrocebus_patas.Contig8                         48766814 50 -  48907691 aa-t-----a-aatatt---------aatacc-tacag-tcctcatgttgta-c---attagat-cc-ctcaa---c
i Erythrocebus_patas.Contig8                        C 0 C 0
s Eulemur_albifrons.k141_715837                          1282 51 +     13586 ga-t-----accacatt---------attgcc-tgcag-tcctcatgttgta-c---attagtg-cc-ctgga---c
i Eulemur_albifrons.k141_715837                     C 0 C 0
s Eulemur_collaris.k141_311830                           1219 51 -      6809 ga-t-----accacatt---------attgcc-tgcag-tcctcatgttgta-c---atcagtg-cc-ttaga---c
i Eulemur_collaris.k141_311830                      C 0 C 0
s Eulemur_coronatus.k141_3240342                         7689 51 +     36558 ga-t-----accacatt---------attgcc-tgcag-tcctcatgttgta-c---attagtg-cc-ctaga---c
i Eulemur_coronatus.k141_3240342                    C 0 C 0
s Eulemur_flavifrons.k141_903901                         4006 51 +     60246 ga-t-----acctcatt---------attgcc-tgcag-tcctcatgttgta-c---attagtg-cc-ctgga---c
i Eulemur_flavifrons.k141_903901                    C 0 C 0
s Eulemur_fulvus.k141_653297                             7494 51 +    109717 ga-t-----accacatt---------attgcc-tgcag-tcctcatgttgta-c---attagtg-cc-ctgga---c
i Eulemur_fulvus.k141_653297                        C 0 C 0
s Eulemur_macaco.k141_1341545                           11868 51 +     16540 ga-t-----acctcatt---------attgcc-tgcag-tcctcatgttgta-c---attagtg-cc-ctgga---c
i Eulemur_macaco.k141_1341545                       C 0 C 0
s Eulemur_mongoz.k141_825972                            12145 51 +     27497 ga-t-----accacatt---------attgcc-tgcag-tcctcatgttgta-c---attagtg-cc-ctaga---c
i Eulemur_mongoz.k141_825972                        C 0 C 0
s Eulemur_rubriventer.k141_411740                       14601 51 +     26808 ga-t-----accacatt---------attgcc-tgcag-tcctcatgttgta-c---attagtg-cc-ctaga---c
i Eulemur_rubriventer.k141_411740                   C 0 C 0
s Eulemur_rufus.k141_1620292                            29335 51 +     46535 ga-t-----accacatt---------attgcc-tgcag-tcctcatgttgta-c---attagtg-cc-ttaga---c
i Eulemur_rufus.k141_1620292                        C 0 C 0
s Eulemur_sanfordi.k141_186399                          12058 51 -     29447 ga-t-----accacatt---------attgcc-tgcag-tcctcatgttgta-c---attagtg-cc-ctgga---c
i Eulemur_sanfordi.k141_186399                      C 0 C 0
s Fukomys_damarensis.KN123630.1                      13889284 43 -  19261668 --------------att---------attaac-tatgg-cctttgcattaca-t---attaatt-ct-ctaga---t
i Fukomys_damarensis.KN123630.1                     I 3 C 0
s Galeopterus_variegatus.GalVar_scaffold_354           152533 51 +    324696 aa-t-----ataatatt---------tttaac-tgtag-tcctcatattgta-c---attagat-ct-ccaga---c
i Galeopterus_variegatus.GalVar_scaffold_354        C 0 C 0
s Gorilla_beringei.k141_111300                           1388 50 -     14630 aa-t-----c-aatatt---------aatacc-tacag-tcctcatgttgta-c---attagat-cc-ctcaa---c
i Gorilla_beringei.k141_111300                      C 0 C 0
s Gorilla_gorilla.LT578340.1                        119648486 50 - 195582420 aa-t-----c-aatatt---------aatacc-tacag-tcctcatgttgta-c---attagat-cc-ctcaa---c
i Gorilla_gorilla.LT578340.1                        C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493               73528 42 +    118900 --------------ac----------attaac-tacaa-tacttttgttgaa-c---actggat-gt-ctaga---C
i Graphiurus_murinus.GraMur_scaffold_4493           I 2 C 0
s Hapalemur_alaotrensis.k141_1198205                     1829 49 +      3980 ga-t-----accatatt---------attgcc-tgcag-tcctcat--tgta-c---attagtg-cc-ctaga---c
i Hapalemur_alaotrensis.k141_1198205                C 0 C 0
s Hapalemur_gilberti.k141_97962                         24307 51 +     26611 ga-t-----gccatatt---------attgcc-tgcag-tcctcatgttgta-c---attagtg-cc-ctaga---c
i Hapalemur_gilberti.k141_97962                     C 0 C 0
s Hapalemur_griseus.k141_1387522                         1761 51 +     56096 ga-t-----accatatt---------attgcc-tgcag-tcctcatgttgta-c---attagtg-cc-ctaga---c
i Hapalemur_griseus.k141_1387522                    C 0 C 0
s Hapalemur_meridionalis.k141_186231                    25034 51 -     42470 ga-t-----accatatt---------attgcc-tgcag-tcctcatgttgta-c---attagtg-cc-ctaga---c
i Hapalemur_meridionalis.k141_186231                C 0 C 0
s Hapalemur_occidentalis.k141_797938                    41634 49 -     54384 ga-t-----accatatt---------attgcc-tgcag-tcctcat--tgta-c---attagtg-cc-ctaga---c
i Hapalemur_occidentalis.k141_797938                C 0 C 0
s Heterocephalus_glaber.JH602058.1                    2547272 43 +  31725842 --------------att---------attaac-tatag-cctttgtatgatg-t---attagtt-ct-ctaga---t
i Heterocephalus_glaber.JH602058.1                  I 3 C 0
s Hoolock_leuconedys.ctg649                                98060 50 +    115816 ag-t-----a-aatatt---------aatacc-tacag-tcctcatgttgtg-c---atcagat-cc-ctcaa---c
i Hoolock_leuconedys.ctg649                            C 0 C 0
s Hylobates_abbotti.k141_493872                          1197 50 +      5897 ag-t-----a-aatatt---------aatacc-tacag-tcctcatgttgtg-c---atcagat-cc-ctcaa---c
i Hylobates_abbotti.k141_493872                     C 0 C 0
s Hylobates_agilis.k141_961056                          20968 50 -     21634 ag-t-----a-aatatt---------aatacc-tacag-tcctcatgttgtg-c---atcagat-cc-ctcaa---c
i Hylobates_agilis.k141_961056                      I 2 I 460
s Hylobates_klossii.k141_466549                          7655 50 +     11537 ag-t-----a-aatatt---------aatacc-tacag-tcctcatgttgtg-c---atcagat-cc-ctcaa---c
i Hylobates_klossii.k141_466549                     C 0 C 0
s Hylobates_pileatus_b.LG03                                 92553606  4 - 189753342 --------------atc---------a--------------------------------------------------
i Hylobates_pileatus_b.LG03                                N 0 C 0
s Hylobates_muelleri.k141_1133650                         632 50 -      2775 ag-t-----a-aatatt---------aatacc-tacag-tcctcatgttttg-c---atcagat-cc-ctcaa---c
i Hylobates_muelleri.k141_1133650                   C 0 C 0
s Hylobates_pileatus_a.tarseq_428                       4030215  4 -  24252207 --------------atc---------a--------------------------------------------------
i Hylobates_pileatus_a.tarseq_428                     N 0 N 0
s Hystrix_cristata.HysCri_scaffold_50788                 2265 43 +     22540 --------------aat---------attaac-tgtag-actttgtgtaatg-t---attagtt-ct-ctaga---c
i Hystrix_cristata.HysCri_scaffold_50788            I 3 C 0
s Ictidomys_tridecemlineatus.JH393315.1               7122101 43 +  13083262 --------------att---------attaac-tacag-gacccatgaggta-c---tttagct-ct-ctaga---t
i Ictidomys_tridecemlineatus.JH393315.1             I 3 C 0
s Indri_indri.k141_3334527                               8270 51 +      9207 ga-t-----accatatt---------attacc-ctcag-tcctcatgttgtt-c---attagtg-cc-ttaga---c
i Indri_indri.k141_3334527                          C 0 C 0
s Jaculus_jaculus.JH725517.1                          8561676 15 +  11848649 ---------------------------------------------------------CATTACT-CT-CTAGA---C
i Jaculus_jaculus.JH725517.1                        N 0 C 0
s Lagothrix_lagothricha.k141_12968                      46114 50 -    147782 aa-t-----a-aatatt---------aatacc-tacag-ttctcatgttgta-c---attagat-ac-ctcaa---c
i Lagothrix_lagothricha.k141_12968                  C 0 C 0
s Lemur_catta.scaffold_1                            258403310 51 - 285822530 ga-t-----accatatt---------attacc-tgcag-tcctcatgttgta-c---attagtg-cc-ctaga---c
i Lemur_catta.scaffold_1                            C 0 C 0
s Lepilemur_ankaranensis.k141_884009                    20203 51 +     39228 ga-t-----accatatt---------atcgcc-tgcag-tcctcatgttgta-c---attagtg-cc-ctaga---c
i Lepilemur_ankaranensis.k141_884009                C 0 C 0
s Lepilemur_dorsalis.k141_134267                        49582 48 +     63517 ga-t-----accatatc------------gcc-tgcag-tcctcgtgttgta-c---attagtg-cc-ctaga---c
i Lepilemur_dorsalis.k141_134267                    C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                    74799 51 +    116806 ga-t-----accatatt---------atctcc-tgcag-tcctcatgttgta-c---attagtg-cc-ctaaa---c
i Lepilemur_ruficaudatus.k141_617879                C 0 C 0
s Lepilemur_septentrionalis.k141_578524                 27839 51 -     33031 ga-t-----accatatt---------atcgcc-tgcag-tcctcatgttgta-c---attagtg-cc-ctaga---c
i Lepilemur_septentrionalis.k141_578524             C 0 C 0
s Lophocebus_aterrimus.ctg55                         19243899 51 +  19376315 aaat-----a-aatatt---------aatacc-tacag-tcctcatgttgta-c---attagat-cc-ctcaa---c
i Lophocebus_aterrimus.ctg55                        C 0 C 0
s Loris_lydekkerianus.k141_550999                        6812 48 +     84689 at-t-----acaacctt---------gttacc-gta-g-tcctc-tattgt-ac---attggag-cc-tac-a---c
i Loris_lydekkerianus.k141_550999                   C 0 C 0
s Loris_tardigradus.ctg97                             3774571 48 +   6799190 at-t-----acaacctt---------gttacc-gta-g-tcctc-tattgt-ac---attggag-cc-tac-a---c
i Loris_tardigradus.ctg97                           C 0 C 0
s Macaca_arctoides.k141_2201161                         15586 50 +     74745 aa-t-----a-aatatt---------aatacc-tacag-tcctcatgttgta-c---attagat-ct-ctcaa---c
i Macaca_arctoides.k141_2201161                     C 0 C 0
s Macaca_assamensis.Contig65                         12702092 50 +  12821369 aa-t-----a-aatatt---------aatacc-tacag-tcctcatgttgta-c---attagat-ct-ctcaa---c
i Macaca_assamensis.Contig65                        C 0 C 0
s Macaca_cyclopis.k119_1168412                           4185 50 +      6569 aa-t-----a-aatatt---------aatacc-tacag-tcctcatgttgta-c---attagat-cc-ctcaa---c
i Macaca_cyclopis.k119_1168412                      C 0 C 0
s Macaca_fascicularis.k141_155037                       42485 50 +     63263 aa-t-----a-aatatt---------aatacc-tacag-tcctcatgttgta-c---attagat-cc-ctcaa---c
i Macaca_fascicularis.k141_155037                   C 0 C 0
s Macaca_fuscata.k119_1068107                           11062 50 +     12679 aa-t-----a-aatatt---------aatacc-tacag-tcctcatgttgta-c---attagat-cc-ctcaa---c
i Macaca_fuscata.k119_1068107                       C 0 C 0
s Macaca_leonina.k141_3421209                             635 50 +      3017 aa-t-----a-aatatt---------aatacc-tacag-tcctcatgttgta-c---attagat-cc-ctcaa---c
i Macaca_leonina.k141_3421209                       C 0 C 0
s Macaca_maura.k141_251854                              42247 50 -     79256 aa-t-----a-aatatt---------aatacc-tacag-tcctcatgttgta-c---attagat-cc-ctcaa---c
i Macaca_maura.k141_251854                          C 0 C 0
s Macaca_mulatta.NC_041755.1                        196031167 50 + 196197964 aa-t-----a-aatatt---------aatacc-tacag-tcctcatgttgta-c---attagat-cc-ctCAA---C
i Macaca_mulatta.NC_041755.1                        C 0 C 0
s Macaca_nemestrina.KQ004885.1                       11441271 50 +  11645122 aa-t-----a-aatatt---------aatacc-tacag-tcctcatgttgta-c---attagat-cc-ctCAA---C
i Macaca_nemestrina.KQ004885.1                      C 0 C 0
s Macaca_nigra.k141_282495                               1197 50 -     46448 aa-t-----a-aatatt---------aatacc-tacag-tcctcatgttgta-c---attagat-cc-ctcaa---c
i Macaca_nigra.k141_282495                          C 0 C 0
s Macaca_radiata.k141_1580474                            1024 50 -      3617 aa-t-----a-aatatt---------aatacc-tacag-tcctcatgttgta-c---attagat-cc-ctcaa---c
i Macaca_radiata.k141_1580474                       C 0 C 0
s Macaca_siberu.k141_741907                             11357 50 -     55006 aa-t-----a-aatatt---------aatacc-tacag-tcctcatgttgta-c---attagat-cc-ctcaa---c
i Macaca_siberu.k141_741907                         C 0 C 0
s Macaca_silenus.Contig12                            43836396 50 +  43892939 aa-t-----a-aatatt---------aatacc-tacag-tcctcatgttgta-c---attagat-cc-ctcaa---c
i Macaca_silenus.Contig12                           C 0 C 0
s Macaca_thibetana.k99_116940                            3619 50 -      5978 aa-t-----a-aatatt---------aatacc-tacag-tcctcatgttgta-c---attagat-ct-ctcaa---c
i Macaca_thibetana.k99_116940                       C 0 C 0
s Macaca_tonkeana.k141_2870633                           1199 50 -     27140 aa-t-----a-aatatt---------aatacc-tacag-tcctcatgttgta-c---attagat-cc-ctcaa---c
i Macaca_tonkeana.k141_2870633                      C 0 C 0
s Mandrillus_leucophaeus.scaffold125                 43433060 50 -  43563597 aa-t-----a-aatatt---------aatacc-tacag-tcctcatgttgta-c---attagat-cc-ctcaa---c
i Mandrillus_leucophaeus.scaffold125                C 0 C 0
s Mandrillus_sphinx.Contig144                         4445886 50 -   4543643 aa-t-----a-aatatt---------aatacc-tacag-tcctcatgttgta-c---attagat-cc-ctcaa---c
i Mandrillus_sphinx.Contig144                       C 0 C 0
s Marmota_marmota.CZRN01000005.1                     36869945 43 +  64221397 --------------act---------attaac-tacag-gacccatgaggta-c---cttggct-ct-ctaga---c
i Marmota_marmota.CZRN01000005.1                    I 3 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233            7845 43 +     15977 --------------gct---------atgtgc-tatag-accccatgttgta-a---attagat-tt-ctaga---c
i Meriones_unguiculatus.MerUng_scaffold_52233       I 3 C 0
s Mesocricetus_auratus.KB708139.1                     1042793 43 -  26018355 --------------gtt---------acttgc-tataa-tatccatgttgtg-c---attcaat-tt-gtaga---c
i Mesocricetus_auratus.KB708139.1                   I 3 C 0
s Microcebus_murinus.CM007691.1                      16506422 54 +  47401472 GA-T-----ACCGTATT---------ATTGCC-TGCAG-TCCTAATGCTGTA-C---ATTAGTG-CC-CTAGACTTC
i Microcebus_murinus.CM007691.1                     C 0 C 0
s Microtus_ochrogaster.CM001673.1                    22815156 43 -  98408828 --------------gtt---------atttgc-tatag-tctttctgctgta-c---aattggt-tt-ctATA---C
i Microtus_ochrogaster.CM001673.1                   I 3 C 0
s Miopithecus_ogouensis.k141_2666161                    31734 50 +     34273 aa-t-----a-aatatt---------aatacc-tacag-tcctcatgttgta-c---attagat-cc-ctcaa---c
i Miopithecus_ogouensis.k141_2666161                C 0 C 0
s Mirza_zaza.k141_226143                                 1835 53 +      8497 -a-t-----accttatt---------attgcc-tgcag-tcctcatgctgta-c---attggtg-cc-ctagacttc
i Mirza_zaza.k141_226143                            C 0 C 0
s Mus_caroli.LT608236.1                              70761313 43 +  92629107 --------------att---------ttttgc-tataA-TGTTCATGTTGTA-C---ATTGGAT-TT-CTATA---C
i Mus_caroli.LT608236.1                             I 3 C 0
s Mus_musculus.chr16                                 75484388 43 +  98207768 --------------att---------ttttgc-TCTAA-TGTTCATGTTGTA-C---ATTAGAT-TT-CTATA---C
i Mus_musculus.chr16                                I 3 C 0
s Mus_pahari.LT608305.1                              67548928 43 +  89017189 --------------att---------atttgc-tataa-tgttcatgttgta-c---attagat-tt-ctaga---c
i Mus_pahari.LT608305.1                             I 3 C 0
s Mus_spretus.CM004110.1                             74324026 43 +  97876770 --------------att---------ttttgc-tCTAA-TGTTCATGTTGTA-C---ATTAGAT-TT-CTATA---C
i Mus_spretus.CM004110.1                            I 3 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643          6843 42 +     98495 --------------ac----------attaac-tacat-cactcttgttgaa-c---acggcct-gt-ctaga---c
i Muscardinus_avellanarius.MusAve_scaffold_9643     I 3 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                 86051 43 -    117718 --------------att---------atgaac-tata-gcttttgtgttatg-t---attagtt-ca-ctaga---a
i Myocastor_coypus.MyoCoy_scaffold_3653             I 24 C 0
s Nannospalax_galili.KL201303.1                        107120 37 +    362372 --------------gtt---------att-----attg-ttctcatgtccta-g---a--acat-gt-ctaga---c
i Nannospalax_galili.KL201303.1                     I 3 C 0
s Nasalis_larvatus.k141_153429                           4099 50 +     48152 aa-t-----a-aatatt---------aatacc-tacag-tcctcacgttgta-c---attagat-cc-ctcaa---c
i Nasalis_larvatus.k141_153429                      C 0 C 0
s Nomascus_concolor.k141_463898                          1715  7 +      1817 -----------AATATT---------A--------------------------------------------------
i Nomascus_concolor.k141_463898                     I 4 N 0
s Nycticebus_bengalensis.LG16                        65563160 48 -  95554990 at-t-----acaacatt---------gttacc-gtg-g-tcctt-tattgt--c---attggag-ccctac-a---c
i Nycticebus_bengalensis.LG16                       C 0 C 0
s Nycticebus_coucang.k141_7268257                        2175 48 -      2537 at-t-----acaacatt---------gttacc-gtg-g-tcctt-tattgt--c---attggag-ccctac-a---c
i Nycticebus_coucang.k141_7268257                   C 0 I 6
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17  65665520 48 +  89412551 at-t-----acaacatt---------gttacc-gtg-g-tcctt-tattgt--c---attggag-ccctac-a---c
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17 C 0 C 0
s Octodon_degus.JH651621.1                            3674584 42 +  10294119 --------------att---------attaac-tgtaa-ctt-catgttatg-t---actagtt-ct-ataga---a
i Octodon_degus.JH651621.1                          I 3 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821              120806 43 +    145789 --------------att---------atttgc-tatag-tctttctgttgta-c---aattggt-tt-ctATa---c
i Ondatra_zibethicus.OndZib_scaffold_6821           I 3 I 168
s Onychomys_torridus.OnyTor_scaffold_12578              32918 43 +     62360 --------------GTT---------ATTGGC-TATAA-TTTTCCTGTTGTG-C---ATTAGGT-TT-CTAGA---C
i Onychomys_torridus.OnyTor_scaffold_12578          I 3 C 0
s Pan_paniscus.CM003386.1                           127570730 50 - 205426864 AA-T-----C-AATATT---------AATTCC-TAcag-tcctcatgttgta-c---attagct-CC-CTCAA---C
i Pan_paniscus.CM003386.1                           C 0 C 0
s Pan_troglodytes.KZ622853.1                           258444 50 +    258671 aa-t-----a-aatatt---------aatacc-tacag-tcctcatgttgta-c---attatat-CC-CTCAA---C
i Pan_troglodytes.KZ622853.1                        I 370 I 79
s Papio_anubis.CM001492.2                           188151844 51 - 188283584 aaat-----a-aatatt---------aatacc-tacag-tcctcatgttgta-c---attagat-cc-cTCAA---C
i Papio_anubis.CM001492.2                           C 0 C 0
s Papio_cynocephalus.k141_386926                        48056 51 +     76494 aaat-----a-aatatt---------aatacc-tacag-tcctcatgttgta-c---attagat-cc-ctcaa---c
i Papio_cynocephalus.k141_386926                    C 0 C 0
s Papio_hamadryas.Contig15                           47509240 51 +  47705337 aaat-----a-aatatt---------aatacc-tacag-tcctcatgttgta-c---attagat-cc-ctcaa---c
i Papio_hamadryas.Contig15                          C 0 C 0
s Papio_kindae.k141_5458022                             63223 51 -    104429 aaat-----a-aatatt---------aatacc-tacag-tcctcatgttgta-c---attagat-cc-ctcaa---c
i Papio_kindae.k141_5458022                         C 0 C 0
s Papio_papio.k141_3561084                              13007 51 -     29451 aaat-----a-aatatt---------aatacc-tacag-tcctcatgttgta-c---attagat-cc-ctcaa---c
i Papio_papio.k141_3561084                          C 0 C 0
s Papio_ursinus.k141_3762866                            33412 51 +     35859 aaat-----a-aatatt---------aatacc-tacag-tcctcatgttgta-c---attagat-cc-ctcaa---c
i Papio_ursinus.k141_3762866                        C 0 C 0
s Perodicticus_ibeanus.k141_117958                       1161 50 -     23713 at-t-----ataacatt---------gttacctgtc-g-ttctc-tgttgc-ac---attggcgccc-tag-a---c
i Perodicticus_ibeanus.k141_117958                  C 0 C 0
s Perodicticus_potto.k141_713187                        20458 50 -     27972 at-t-----ataacatt---------gttacctgtc-a-ttctc-tgttgc-ac---attggccccc-tag-a---c
i Perodicticus_potto.k141_713187                    C 0 C 0
s Peromyscus_maniculatus.KI615518.1                   4946078 43 -   8017169 --------------GTT---------ATTGGC-TATAG-TCTTCCTGTTGTA-C---CTTAGGT-TT-CTAGA---C
i Peromyscus_maniculatus.KI615518.1                 I 3 C 0
s Piliocolobus_badius.k141_1497351                       1100 50 -      3310 aa-t-----a-aatatt---------aattcc-tacag-tcctcacattgta-c---attagat-cc-ctcaa---c
i Piliocolobus_badius.k141_1497351                  C 0 C 0
s Piliocolobus_gordonorum.k141_902470                   21006 50 -     82327 aa-t-----a-aatatt---------aattcc-tacag-tcctcacgttgta-c---attagat-cc-ctcaa---c
i Piliocolobus_gordonorum.k141_902470               C 0 C 0
s Piliocolobus_kirkii.k141_557609                       17757 50 +     19957 aa-t-----a-aatatt---------aattcc-tacag-tcctcacgttgta-c---attagat-cc-ctcaa---c
i Piliocolobus_kirkii.k141_557609                   C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1           26735766 50 +  26888534 aa-t-----a-aatatt---------aattcc-taCag-tcctcacgttgta-c---attagat-cc-ctcaa---c
i Piliocolobus_tephrosceles.PDMG02000036.1          C 0 C 0
s Pithecia_albicans.k141_991845                         39641 50 -     61926 ga-t-----a-aatatt---------aatacc-tacag-tcctcatgctgta-c---attagat-ac-ctcaa---c
i Pithecia_albicans.k141_991845                     C 0 C 0
s Pithecia_chrysocephala.k141_159118                    21070 50 +     78826 ga-t-----a-aatatt---------aatacc-tacag-tcctcatgctgta-c---attagat-ac-ctcaa---c
i Pithecia_chrysocephala.k141_159118                C 0 C 0
s Pithecia_hirsuta.k141_1152968                          5021 50 -     15800 ga-t-----a-aatatt---------aatacc-tacag-tcctcatgctgta-c---attagat-ac-ctcaa---c
i Pithecia_hirsuta.k141_1152968                     C 0 C 0
s Pithecia_mittermeieri.k141_2119203                     8219 50 -     16101 ga-t-----a-aatatt---------aatacc-tacag-tcctcatgctgta-c---attagat-ac-ctcaa---c
i Pithecia_mittermeieri.k141_2119203                C 0 C 0
s Pithecia_pissinattii.k141_1102319                      1528 50 +      9673 ga-t-----a-aatatt---------aatacc-tacag-tcctcatgctgta-c---attagat-ac-ctcaa---c
i Pithecia_pissinattii.k141_1102319                 C 0 C 0
s Pithecia_pithecia.tarseq_313                       13470522 50 -  19735023 ga-t-----a-aatatt---------aatacc-tacag-tcctcatgctgta-c---attagat-ac-ctcaa---c
i Pithecia_pithecia.tarseq_313                      C 0 C 0
s Pithecia_vanzolinii.k141_831006                        9430 50 -     31692 ga-t-----a-aatatt---------aatacc-tacag-tcctcatgctgta-c---attagat-ac-ctcaa---c
i Pithecia_vanzolinii.k141_831006                   C 0 C 0
s Plecturocebus_bernhardi.k141_959214                   18794 50 +     44506 aa-t-----a-aatatt---------aatacc-tacaa-tgctcatgttgta-c---attagat-at-ctcaa---c
i Plecturocebus_bernhardi.k141_959214               C 0 C 0
s Plecturocebus_brunneus.k141_498086                    19012 50 +     67491 aa-t-----a-aatatt---------aatacc-tacag-tgctcatgttgta-c---attagat-ac-ctcaa---c
i Plecturocebus_brunneus.k141_498086                C 0 C 0
s Plecturocebus_caligatus.k141_2539816                   9257 50 -     98129 aa-t-----a-aatatt---------aatacc-tacag-tgctcatgttgta-c---attagat-ac-ctcaa---c
i Plecturocebus_caligatus.k141_2539816              C 0 C 0
s Plecturocebus_cinerascens.k141_744510                 18857 50 +    147771 aa-t-----a-aatatt---------aatacc-tacag-tgctcatgttgta-c---attagat-ac-ctcaa---c
i Plecturocebus_cinerascens.k141_744510             C 0 C 0
s Plecturocebus_cupreus.k141_1223294                    19108 50 -     23762 aa-t-----a-aatatt---------aatacc-tacag-tgctcatgttgta-c---attagat-ac-ctcaa---c
i Plecturocebus_cupreus.k141_1223294                C 0 C 0
s Plecturocebus_dubius.k141_2078842                     19056 50 -     19696 aa-t-----a-aatatt---------aatacc-tacag-tgctcatgttgta-c---attagat-ac-ctcaa---c
i Plecturocebus_dubius.k141_2078842                 C 0 C 0
s Plecturocebus_grovesi.k141_242819                     18930 50 +    152463 aa-t-----a-aatatt---------aatacc-tacag-tgctcatgttgta-c---attagat-ac-ctcaa---t
i Plecturocebus_grovesi.k141_242819                 C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                  5687 50 +      8943 aa-t-----a-aatatt---------aatacc-tacag-tgctcatgttgta-c---attagat-ac-ctcaa---c
i Plecturocebus_hoffmannsi.k141_1595076             C 0 C 0
s Plecturocebus_miltoni.k141_841561                      8647 50 +    134592 aa-t-----a-aatatt---------aatacc-tacag-tgctcatgttgta-c---attagat-ac-ctcaa---c
i Plecturocebus_miltoni.k141_841561                 C 0 C 0
s Plecturocebus_moloch.k141_890597                      19240 50 -     75465 aa-t-----a-aatatt---------aatacc-tacag-tgctcatgttgta-c---attagat-ac-ctcaa---c
i Plecturocebus_moloch.k141_890597                  C 0 C 0
s Pongo_abelii.NDHI03003816.1                          183284 49 -    373494 aa-t-----a-aatatt---------aatacc-tacac-t-ctcatgttgta-c---attagat-cc-ctCAA---C
i Pongo_abelii.NDHI03003816.1                       C 0 C 0
s Pongo_pygmaeus.ctg62                               19803186 50 +  19899266 aa-t-----a-aatatt---------aatacc-tacag-tcctcatgttgta-c---attagat-cc-ctcaa---c
i Pongo_pygmaeus.ctg62                              C 0 C 0
s Presbytis_comata.k141_672698                           1336 50 -     15069 aa-t-----a-aatatt---------aatacc-tacag-tcctcacgttgta-c---attagat-cc-ctcaa---c
i Presbytis_comata.k141_672698                      C 0 C 0
s Presbytis_mitrata.k141_860013                          1470 50 +     14865 aa-t-----a-aatatt---------aatacc-tacag-tcctcacgttgta-c---attagat-cc-ctcaa---c
i Presbytis_mitrata.k141_860013                     C 0 C 0
s Prolemur_simus.MPIZ01000048.1                       6844683 51 +  12164890 ga-t-----ACCATATT---------ATTGCC-Tgcag-tcctcatgttgta-c---attagtg-CC-CTAGA---C
i Prolemur_simus.MPIZ01000048.1                     C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                663963 51 -   2312742 GA-T-----ACCATATC---------ATTACC-TGCAG-TCCTCATGTTGTT-C---ATTAGTG-CC-TTAGA---C
i Propithecus_coquerelli.NW_012147997.1             C 0 C 0
s Propithecus_coronatus.k141_844990                     30715 51 +     30823 ga-t-----accatatc---------attacc-tgcag-tcctcatgttgtt-c---attagtg-cc-ttaga---c
i Propithecus_coronatus.k141_844990                 C 0 C 0
s Propithecus_diadema.k141_577245                       39152 51 +     52369 ga-t-----accatatc---------attacc-tgcag-tcctcatgttgtt-c---attagtg-cc-ttaga---c
i Propithecus_diadema.k141_577245                   C 0 C 0
s Propithecus_edwardsi.k141_1317105                     31541 51 -     44753 ga-t-----accatatc---------attacc-tgcag-tcctcatgttgtt-c---attagtg-cc-ttaga---c
i Propithecus_edwardsi.k141_1317105                 C 0 C 0
s Propithecus_perrieri.k141_7554                        13463 51 +     27322 ga-t-----accatatc---------attacc-tgcag-tcctcatgttgtt-c---attagtg-cc-ttaga---c
i Propithecus_perrieri.k141_7554                    C 0 C 0
s Propithecus_tattersalli.k141_907138                   13107 51 -     53241 ga-t-----accatatc---------attacc-tgcag-tcctcatgttgtt-c---attagtg-cc-ttaga---c
i Propithecus_tattersalli.k141_907138               C 0 C 0
s Propithecus_verreauxi.k141_158021                     35378 51 -     48185 ga-t-----accatatc---------attacc-tgcag-tcctcatgttgtt-c---attagtg-cc-ttaga---c
i Propithecus_verreauxi.k141_158021                 C 0 C 0
s Psammomys_obesus.NESX01026517.1                       28906 43 +     77221 --------------gct---------atttgc-tatag-acgccatgttgta-a---attagat-tt-ctaga---c
i Psammomys_obesus.NESX01026517.1                   I 3 C 0
s Pygathrix_cinerea.k141_374971                         25461 50 +     56732 aa-t-----a-aatatt---------aatacc-tacag-tcctcacgttgta-c---attagat-cc-ctcaa---c
i Pygathrix_cinerea.k141_374971                     C 0 C 0
s Pygathrix_nigripes_b.ctg79                             6801951 50 +   6970761 aa-t-----a-aatatt---------aatacc-tacag-tcctcacgttgta-c---attagat-cc-ctcaa---c
i Pygathrix_nigripes_b.ctg79                           C 0 C 0
s Pygathrix_nigripes_a.k141_101123                         1343 50 +     18040 aa-t-----a-aatatt---------aatacc-tacag-tcctcacgttgta-c---attagat-cc-ctcaa---c
i Pygathrix_nigripes_a.k141_101123                    C 0 C 0
s Rattus_norvegicus.chr11                            13910850 43 +  90463843 --------------GTT---------ATTTGC-TGTAG-CGTTCCTGTGATA-C---ATTAAAT-TT-CTAGA---C
i Rattus_norvegicus.chr11                           I 3 C 0
s Rhinopithecus_bieti.k119_102124                       11898 50 -     14454 aa-t-----a-aatatt---------aatacc-tacag-tcctcacgttgta-c---attagat-cc-ctcaa---c
i Rhinopithecus_bieti.k119_102124                   C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1               206373224 50 - 206558726 aa-t-----a-aatatt---------aatacc-tacag-tcctcacgttgta-c---attaggt-cc-ctcaa---c
i Rhinopithecus_roxellana.NC_044549.1               C 0 C 0
s Rhinopithecus_strykeri.ctg4                        44850872 50 -  45163003 aa-t-----a-aatatt---------aatacc-tacag-tcctcacgttgta-c---attagat-cc-ctcaa---c
i Rhinopithecus_strykeri.ctg4                       C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                 15668665 50 -  43202129 aa-t-----a-aatatt---------aatacc-tacag-tcctcatgttgta-c---attagat-aA-CTCAA---C
i Saimiri_boliviensis.NW_024100938.1                C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                     540 50 +     34089 aa-t-----a-aatatt---------aatacc-tacag-tcctcatgttgta-c---attagat-aa-ctcaa---c
i Saimiri_cassiquiarensis.k141_808270               C 0 C 0
s Saimiri_macrodon.k141_2087127                           471 50 -     60842 aa-t-----a-aatatt---------aatacc-tacag-tcctcatgttgta-c---attagat-aa-ctcaa---c
i Saimiri_macrodon.k141_2087127                     C 0 C 0
s Saimiri_oerstedii.k141_841116                           540 50 +     67014 aa-t-----a-aatatt---------aatacc-tacag-tcctcatgttgta-c---attagat-aa-ctcaa---c
i Saimiri_oerstedii.k141_841116                     C 0 C 0
s Saimiri_sciureus.k141_1947592                           540 50 +     60816 aa-t-----a-aatatt---------aatacc-tacag-tcctcatgttgta-c---attagat-aa-ctcaa---c
i Saimiri_sciureus.k141_1947592                     C 0 C 0
s Saimiri_ustus.k141_1282476                              468 50 -     76454 aa-t-----a-aatatt---------aatacc-tacag-tcctcatgttgta-c---attagat-aa-ctcaa---c
i Saimiri_ustus.k141_1282476                        C 0 C 0
s Sapajus_apella.ctg10                               17337048 50 -  30362882 aa-t-----a-aatatt---------aatacc-tgcag-tcctcatgttgta-c---gttagat-ac-ctcaa---c
i Sapajus_apella.ctg10                              C 0 C 0
s Sapajus_macrocephalus.k141_966464                     16649 50 -     62485 aa-t-----a-aatatt---------aatacc-tacag-tcctcatgttgta-c---gttagat-ac-ctcaa---c
i Sapajus_macrocephalus.k141_966464                 C 0 C 0
s Semnopithecus_entellus.k141_1527475                   23886 50 +     26421 aa-t-----a-aatatt---------aatacc-tacag-tcctcacattgta-c---attagat-cc-ctcaa---c
i Semnopithecus_entellus.k141_1527475               C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                   4348 50 +     20762 aa-t-----a-aatatt---------aatacc-tacag-tcctcacattgta-c---attagat-cc-ctcaa---c
i Semnopithecus_hypoleucos.k141_761524              C 0 C 0
s Semnopithecus_johnii.k141_1351450                     38081 50 +     40653 aa-t-----a-aatatt---------aatacc-tacag-tcctcacattgta-c---attagat-cc-ctcaa---c
i Semnopithecus_johnii.k141_1351450                 C 0 C 0
s Semnopithecus_priam.k141_198153                        8640 50 -     12194 aa-t-----a-aatatt---------aatacc-tacag-tcctcacattgta-c---attagat-cc-ctcaa---c
i Semnopithecus_priam.k141_198153                   C 0 C 0
s Semnopithecus_schistaceus.k141_653647                 22059 50 -     27512 aa-t-----a-aatatt---------aatacc-tacag-tcctcacattgta-c---attagat-cc-ctcaa---c
i Semnopithecus_schistaceus.k141_653647             C 0 C 0
s Semnopithecus_vetulus.k141_642050                     31080 50 -     33692 aa-t-----a-aatatt---------aatacc-tacag-tcctcacattgta-c---attagat-cc-ctcaa---c
i Semnopithecus_vetulus.k141_642050                 C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332               94186 33 -    120886 --------------GTT---------ATTTGC-TAGAG-TCTCCATGTTGTA-T---ATTGC---------------
i Sigmodon_hispidus.SigHis_scaffold_11332           I 3 C 0
s Spermophilus_dauricus.KZ294190.1                    2236027 43 +   2842873 --------------att---------attaac-tacag-gacccatgaggta-c---cttggct-ct-ccaga---c
i Spermophilus_dauricus.KZ294190.1                  I 3 C 0
s Symphalangus_syndactylus.tarseq_24                    10998 50 -  13920577 ag-t-----a-aatatt---------aatacc-tacag-tcctcatgttgtg-c---atcagat-cc-ctcaa---c
i Symphalangus_syndactylus.tarseq_24                I 2 I 79
s Tarsius_lariang.k141_609102                           22794 51 +     42269 aa-t-----ataatgtt---------attacc-aatag-tcctcatgttggt-c---attagaa-tc-ctaga---c
i Tarsius_lariang.k141_609102                       C 0 C 0
s Tarsius_wallacei.k141_48636                           56102 51 +     65473 aa-t-----ataatgtt---------attacc-aatag-tcctcatgttggt-c---attagaa-tc-ctaga---c
i Tarsius_wallacei.k141_48636                       C 0 C 0
s Theropithecus_gelada.CM009951.1                   194003380 50 - 194193292 aa-t-----a-aatatt---------aatacc-tacag-tcctcatgttgta-c---attagat-cc-ctCAA---C
i Theropithecus_gelada.CM009951.1                   C 0 C 0
s Trachypithecus_auratus.k141_738098                    22458 50 +     38948 aa-t-----a-aatatt---------aatacc-tacag-tcctcacattgta-c---attagat-cc-ctcaa---c
i Trachypithecus_auratus.k141_738098                C 0 C 0
s Trachypithecus_crepusculus.k141_1588528               16185 50 -     32910 aa-t-----a-aatatt---------aatacc-tacag-tcctcacattgta-c---attagat-cc-ctcaa---c
i Trachypithecus_crepusculus.k141_1588528           C 0 C 0
s Trachypithecus_cristatus.k141_27198                   22083 50 +     24652 aa-t-----a-aatatt---------aatacc-tacag-tcctcacattgta-c---attagat-cc-ctcaa---c
i Trachypithecus_cristatus.k141_27198               C 0 C 0
s Trachypithecus_francoisi.k141_1178450                   968 50 -      3559 aa-t-----a-aatatt---------aatacc-tacag-tcctcacattgta-c---attagat-cc-ctcaa---c
i Trachypithecus_francoisi.k141_1178450             C 0 C 0
s Trachypithecus_geei.k141_670367                       38907 50 -     54611 aa-t-----a-aatatt---------aatacc-tacag-tcctcacattgta-c---attagat-cc-ctcaa---c
i Trachypithecus_geei.k141_670367                   C 0 C 0
s Trachypithecus_germaini.k141_809503                   14906 50 +     17312 aa-t-----a-aatatt---------aatacc-tacag-tcctcacattgta-c---attagat-cc-ctcaa---c
i Trachypithecus_germaini.k141_809503               C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                22276 50 -     25040 aa-t-----a-aatatt---------aatacc-tacag-tcctcacattgta-c---attagat-cc-ctcaa---c
i Trachypithecus_hatinhensis.k141_357672            C 0 C 0
s Trachypithecus_laotum.k141_171445                       942 50 +      3528 aa-t-----a-aatatt---------aatacc-tacag-tcctcacattgta-c---attagat-cc-ctcaa---c
i Trachypithecus_laotum.k141_171445                 C 0 C 0
s Trachypithecus_leucocephalus.k141_283605              47304 50 +     51589 aa-t-----a-aatatt---------aatacc-tacag-tcctcacattgta-c---attagat-cc-ctcaa---c
i Trachypithecus_leucocephalus.k141_283605          C 0 C 0
s Trachypithecus_melamera.k141_238507                   10472 50 +     14732 aa-t-----a-aatatt---------aatacc-tacag-tcctcacattgta-c---attagat-cc-ctcaa---c
i Trachypithecus_melamera.k141_238507               C 0 C 0
s Trachypithecus_obscurus.k141_1115109                    950 50 -     28054 aa-t-----a-aatatt---------aatacc-tacag-tcctcacattgta-c---attagat-cc-ctcaa---c
i Trachypithecus_obscurus.k141_1115109              C 0 C 0
s Trachypithecus_phayrei.ctg3                        44655745 50 -  44834318 aa-t-----a-aatatt---------aatacc-tacag-tcctcacattgta-c---attagat-cc-ctcaa---c
i Trachypithecus_phayrei.ctg3                       C 0 C 0
s Trachypithecus_pileatus.k141_469329                     755 50 +      3372 aa-t-----a-aatatt---------aatacc-tacag-tcctcacattgta-c---attagat-cc-ctcaa---c
i Trachypithecus_pileatus.k141_469329               C 0 C 0
s Tupaia_chinensis.KB320831.1                         2786216 22 -   3938065 ----------------------------------------------GTTGGA-C---ATTAGAT-CT-ctaga---c
i Tupaia_chinensis.KB320831.1                       I 209 I 263
s Tupaia_tana.TupTan_flattened_line_251551               4594 55 -      5019 aa-tataatattagact---------cttaac-tgtag-t-tttatgttgga-c---attagat-ct-ctaga---C
i Tupaia_tana.TupTan_flattened_line_251551          I 191 C 0
s Varecia_rubra.k141_432109                              1629 51 -     20643 ga-t-----accatatt---------attgcc-tgcag-tcctcatgttgta-c---attagtg-cc-ctaga---c
i Varecia_rubra.k141_432109                         C 0 C 0
s Varecia_variegata.k141_775891                         21174 51 -     33872 ga-t-----accatatt---------attgcc-tgcag-tcctcatgttgta-c---attagtg-cc-ctaga---c
i Varecia_variegata.k141_775891                     C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                   123200 52 -    134049 --------------actctattatttattaac-tacag-gacccatgaggta-c---cttggct-ct-ctaga---c
i Xerus_inauris.XerIna_scaffold_7898                I 3 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                 12020 19 -     20485 -------------------------------------------------GTT-C---ATAAGCT-CT-CTACA---C
i Zapus_hudsonius.ZapHud_scaffold_64392             N 0 C 0
e Otolemur_garnettii.GL873528.1                      18004869 68 -  38779656 I
e Otolemur_crassicaudatus.k141_321880                   35431 68 +     38679 I
e Galagoides_demidoff.k141_1769638                       6763 68 +     27357 I
e Galago_senegalensis.k141_964197                        9743 68 -     43889 I
e Galago_moholi.ctg555                                 207363 68 -    847004 I
e Nomascus_siki_b.tarseq_80                         20456  0 -  18771707 C
e Nomascus_annamensis.k141_745421                         374  0 -      4569 C
e Nomascus_gabriellae.k141_1350167                        785  0 +      9928 C

a score=0.000000
s hg38.chr4_GL000008v2_random                            8046 3 +    209709 ttg
s Acomys_cahirinus.AcoCah_scaffold_1625                108439 3 -    189883 TTC
i Acomys_cahirinus.AcoCah_scaffold_1625             C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                8730 3 -     22067 TTG
i Allactaga_bullata.AllBul_scaffold_70162           C 0 C 0
s Allenopithecus_nigroviridis.k141_3103707              59068 3 +     61638 ttg
i Allenopithecus_nigroviridis.k141_3103707          C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                    50876 3 +     53391 ttg
i Allochrocebus_lhoesti.k141_4825038                C 0 C 0
s Allochrocebus_preussi.k141_1202907                     1600 3 +     72529 ttg
i Allochrocebus_preussi.k141_1202907                C 0 C 0
s Allochrocebus_solatus.k141_787528                      1177 3 +      3797 ttg
i Allochrocebus_solatus.k141_787528                 C 0 C 0
s Alouatta_belzebul.k141_1818029                         6262 3 -     18050 ttg
i Alouatta_belzebul.k141_1818029                    C 0 C 0
s Alouatta_caraya.k141_5460                              7379 3 -     11521 ttg
i Alouatta_caraya.k141_5460                         C 0 C 0
s Alouatta_discolor.k141_811576                          6937 3 -     21359 ttg
i Alouatta_discolor.k141_811576                     C 0 C 0
s Alouatta_juara.k141_1856473                            5320 3 +      7227 ttg
i Alouatta_juara.k141_1856473                       C 0 C 0
s Alouatta_macconnelli.k141_1331706                      6235 3 -     10438 ttg
i Alouatta_macconnelli.k141_1331706                 C 0 C 0
s Alouatta_nigerrima.k141_2718643                        2889 3 +      7047 ttg
i Alouatta_nigerrima.k141_2718643                   C 0 C 0
s Alouatta_palliata.k141_1316127                         6173 3 +     10410 ttg
i Alouatta_palliata.k141_1316127                    C 0 C 0
s Alouatta_puruensis.k141_390786                         7450 3 -      7615 ttg
i Alouatta_puruensis.k141_390786                    C 0 C 0
s Alouatta_seniculus.k141_990213                         2894 3 +      6429 ttg
i Alouatta_seniculus.k141_990213                    C 0 C 0
s Aotus_azarae.k141_3170768                             58577 3 +     78111 tgg
i Aotus_azarae.k141_3170768                         C 0 C 0
s Aotus_griseimembra.k141_3275623                        1508 3 +     22701 tgg
i Aotus_griseimembra.k141_3275623                   C 0 C 0
s Aotus_nancymaae.KZ196176.1                          5745468 3 +   9889416 tgg
i Aotus_nancymaae.KZ196176.1                        C 0 C 0
s Aotus_trivirgatus.k141_1740727                         2060 3 -    104377 ggg
i Aotus_trivirgatus.k141_1740727                    C 0 C 0
s Aotus_vociferans.k141_718647                           2060 3 +     23246 ggg
i Aotus_vociferans.k141_718647                      C 0 C 0
s Arctocebus_calabarensis.k141_1161114                  14363 3 +     17483 atc
i Arctocebus_calabarensis.k141_1161114              C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                         9535321 3 +  39197703 ttg
i Ateles_geoffroyi_b.tarseq_2582                       C 0 C 0
s Ateles_belzebuth.k141_1348307                         56609 3 +     85812 ttg
i Ateles_belzebuth.k141_1348307                     C 0 C 0
s Ateles_chamek.k141_1072810                             7606 3 +     89302 ttg
i Ateles_chamek.k141_1072810                        C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                         12115 3 -     58268 ttg
i Ateles_geoffroyi_a.k141_1300742                     C 0 C 0
s Ateles_marginatus.k141_899112                         60103 3 +    119057 ttg
i Ateles_marginatus.k141_899112                     C 0 C 0
s Ateles_paniscus.k141_1631200                           2054 3 -     25888 ttg
i Ateles_paniscus.k141_1631200                      C 0 C 0
s Cacajao_ayresi.k141_724503                           109978 3 -    171031 ttg
i Cacajao_ayresi.k141_724503                        C 0 C 0
s Cacajao_calvus.k141_96166                              9004 3 +    125063 ttg
i Cacajao_calvus.k141_96166                         C 0 C 0
s Cacajao_hosomi.k141_303789                            11052 3 -    216513 ttg
i Cacajao_hosomi.k141_303789                        C 0 C 0
s Cacajao_melanocephalus.k141_1160263                    3591 3 -    134917 ttg
i Cacajao_melanocephalus.k141_1160263               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_647363               343 3 +      1887 tta
i Capromys_pilorides.CapPil_scaffold_647363         C 0 C 0
s Carlito_syrichta.NW_007248099.1                      305360 3 +    345090 TGG
i Carlito_syrichta.NW_007248099.1                   C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037               26908 3 +     33760 ttg
i Castor_canadensis.CasCan_scaffold_47037           C 0 C 0
s Cavia_aperea.AVPZ01000278.1                        15783642 3 -  24422027 tta
i Cavia_aperea.AVPZ01000278.1                       C 0 C 0
s Cavia_porcellus.DS562889.1                         15795576 3 -  24440124 tta
i Cavia_porcellus.DS562889.1                        C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                   173767 3 +    436027 tta
i Cavia_tschudii.CavTsc_scaffold_488                C 0 C 0
s Cebus_albifrons.Contig22                           18886789 3 -  29618158 ttg
i Cebus_albifrons.Contig22                          C 0 C 0
s Cebus_olivaceus.k141_93739                             4335 3 -     26817 ttg
i Cebus_olivaceus.k141_93739                        C 0 C 0
s Cebus_unicolor.k141_239009                             8575 3 +     25043 ttg
i Cebus_unicolor.k141_239009                        C 0 C 0
s Cephalopachus_bancanus.k141_702587                     4396 3 +     21754 tcg
i Cephalopachus_bancanus.k141_702587                C 0 C 0
s Cercocebus_atys.KQ010443.1                          6550864 3 +   6739814 TTG
i Cercocebus_atys.KQ010443.1                        C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                  52341 3 -     54931 ttg
i Cercocebus_chrysogaster.k141_2951608              C 0 C 0
s Cercocebus_lunulatus.k141_3387186                     17325 3 -     19697 ttg
i Cercocebus_lunulatus.k141_3387186                 C 0 C 0
s Cercocebus_torquatus.k141_3969582                     54856 3 -    107033 ttg
i Cercocebus_torquatus.k141_3969582                 C 0 C 0
s Cercopithecus_ascanius.k141_3371259                    1299 3 -      3853 ttg
i Cercopithecus_ascanius.k141_3371259               C 0 C 0
s Cercopithecus_cephus.k141_598190                      25231 3 +     30494 ttg
i Cercopithecus_cephus.k141_598190                  C 0 C 0
s Cercopithecus_diana.k141_1490386                       1254 3 -      4022 ttg
i Cercopithecus_diana.k141_1490386                  C 0 C 0
s Cercopithecus_hamlyni.k141_381099                      1144 3 -      3505 ttg
i Cercopithecus_hamlyni.k141_381099                 C 0 C 0
s Cercopithecus_lowei.k141_623764                       19955 3 +     35983 ttg
i Cercopithecus_lowei.k141_623764                   C 0 C 0
s Cercopithecus_albogularis.ctg51                          11985731 3 +  12117833 ttg
i Cercopithecus_albogularis.ctg51                         C 0 C 0
s Cercopithecus_mona.ctg12                           46473227 3 +  46592721 ttg
i Cercopithecus_mona.ctg12                          C 0 C 0
s Cercopithecus_neglectus.k141_1474992                  31054 3 +     33420 ttg
i Cercopithecus_neglectus.k141_1474992              C 0 C 0
s Cercopithecus_nictitans.k141_675209                    1090 3 -      3443 ttg
i Cercopithecus_nictitans.k141_675209               C 0 C 0
s Cercopithecus_petaurista.k141_2037881                  2081 3 -      4669 ttg
i Cercopithecus_petaurista.k141_2037881             C 0 C 0
s Cercopithecus_pogonias.k141_1977419                    1885 3 -      4411 ttg
i Cercopithecus_pogonias.k141_1977419               C 0 C 0
s Cercopithecus_roloway.k141_3372345                     1405 3 -      4205 ttg
i Cercopithecus_roloway.k141_3372345                C 0 C 0
s Cheracebus_lucifer.k141_619653                         1588 3 -     18223 ttg
i Cheracebus_lucifer.k141_619653                    C 0 C 0
s Cheracebus_lugens.k141_203936                         18611 3 +     25473 ttg
i Cheracebus_lugens.k141_203936                     C 0 C 0
s Cheracebus_regulus.k141_2128895                       37650 3 +     57117 ttg
i Cheracebus_regulus.k141_2128895                   C 0 C 0
s Cheracebus_torquatus.k141_315545                      42325 3 +     54541 ttg
i Cheracebus_torquatus.k141_315545                  C 0 C 0
s Chinchilla_lanigera.JH721867.1                     15957769 3 +  43084221 tta
i Chinchilla_lanigera.JH721867.1                    C 0 C 0
s Chiropotes_israelita.k141_1189915                     67199 3 +    196370 ttg
i Chiropotes_israelita.k141_1189915                 C 0 C 0
s Chiropotes_sagulatus.k141_773804                      11373 3 +     40510 ttg
i Chiropotes_sagulatus.k141_773804                  C 0 C 0
s Chlorocebus_aethiops.ctg22                         15134685 3 -  15256731 ttg
i Chlorocebus_aethiops.ctg22                        C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                  29731 3 -     53260 ttg
i Chlorocebus_pygerythrus.k141_1486215              C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                    101140179 3 + 101219884 TTG
i Chlorocebus_sabaeus.CM001963.2                    C 0 C 0
s Colobus_angolensis.KN985967.1                      10878761 3 +  10971483 ttg
i Colobus_angolensis.KN985967.1                     C 0 C 0
s Colobus_guereza.LG08                              147659920 3 + 156195979 ttg
i Colobus_guereza.LG08                              C 0 C 0
s Colobus_polykomos.k141_1406057                        11905 3 +     23629 ttg
i Colobus_polykomos.k141_1406057                    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949             273876 3 -    399297 ctc
i Cricetomys_gambianus.CriGam_scaffold_949          C 0 C 0
s Cricetulus_griseus.LT883672.1                      53025353 3 +  72327488 gtt
i Cricetulus_griseus.LT883672.1                     C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447              204589 3 -    956709 CTA
i Ctenodactylus_gundi.CteGun_scaffold_447           C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489             26503 3 -     67205 tta
i Ctenomys_sociabilis.CteSoc_scaffold_19489         C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637            14521 3 +     26546 tta
i Cuniculus_paca.CunPac_flattened_line_16637        C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634         55994 3 -    236241 tta
i Dasyprocta_punctata.DasPun_flattened_line_634     C 0 C 0
s Daubentonia_madagascariensis.ctg11                 16841122 3 +  31942871 ttc
i Daubentonia_madagascariensis.ctg11                C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102            33154 3 -     73477 tta
i Dolichotis_patagonum.DolPat_scaffold_14102        C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                    235539 3 -    369425 ACT
i Ellobius_lutescens.LOEQ01003611.1                 C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                       2548 3 -      7838 ACT
i Ellobius_talpinus.LOJH01090055.1                  C 0 C 0
s Erythrocebus_patas.Contig8                         48766864 3 -  48907691 ttg
i Erythrocebus_patas.Contig8                        C 0 C 0
s Fukomys_damarensis.KN123630.1                      13889327 3 -  19261668 tta
i Fukomys_damarensis.KN123630.1                     C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354           152584 3 +    324696 tta
i Galeopterus_variegatus.GalVar_scaffold_354        C 0 C 0
s Gorilla_beringei.k141_111300                           1438 3 -     14630 ttg
i Gorilla_beringei.k141_111300                      C 0 C 0
s Gorilla_gorilla.LT578340.1                        119648536 3 - 195582420 ttg
i Gorilla_gorilla.LT578340.1                        C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493               73570 1 +    118900 A--
i Graphiurus_murinus.GraMur_scaffold_4493           C 0 C 0
s Heterocephalus_glaber.JH602058.1                    2547315 3 +  31725842 tta
i Heterocephalus_glaber.JH602058.1                  C 0 C 0
s Hoolock_leuconedys.ctg649                                98110 3 +    115816 ttg
i Hoolock_leuconedys.ctg649                            C 0 C 0
s Hylobates_abbotti.k141_493872                          1247 3 +      5897 ttg
i Hylobates_abbotti.k141_493872                     C 0 C 0
s Hylobates_agilis.k141_282275                            460 3 +      1846 ttg
i Hylobates_agilis.k141_282275                      I 50 C 0
s Hylobates_klossii.k141_466549                          7705 3 +     11537 ttg
i Hylobates_klossii.k141_466549                     C 0 C 0
s Hylobates_muelleri.k141_1133650                         682 3 -      2775 ttg
i Hylobates_muelleri.k141_1133650                   C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                 2308 3 +     22540 ttg
i Hystrix_cristata.HysCri_scaffold_50788            C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1               7122144 3 +  13083262 gta
i Ictidomys_tridecemlineatus.JH393315.1             C 0 C 0
s Jaculus_jaculus.JH725517.1                          8561691 3 +  11848649 TTG
i Jaculus_jaculus.JH725517.1                        C 0 C 0
s Lagothrix_lagothricha.k141_12968                      46164 3 -    147782 ttg
i Lagothrix_lagothricha.k141_12968                  C 0 C 0
s Lophocebus_aterrimus.ctg55                         19243950 3 +  19376315 ttg
i Lophocebus_aterrimus.ctg55                        C 0 C 0
s Loris_lydekkerianus.k141_550999                        6860 3 +     84689 ttc
i Loris_lydekkerianus.k141_550999                   C 0 C 0
s Loris_tardigradus.ctg97                             3774619 3 +   6799190 ttc
i Loris_tardigradus.ctg97                           C 0 C 0
s Macaca_arctoides.k141_2201161                         15636 3 +     74745 ttg
i Macaca_arctoides.k141_2201161                     C 0 C 0
s Macaca_assamensis.Contig65                         12702142 3 +  12821369 ttg
i Macaca_assamensis.Contig65                        C 0 C 0
s Macaca_cyclopis.k119_1168412                           4235 3 +      6569 ttg
i Macaca_cyclopis.k119_1168412                      C 0 C 0
s Macaca_fascicularis.k141_155037                       42535 3 +     63263 ttg
i Macaca_fascicularis.k141_155037                   C 0 C 0
s Macaca_fuscata.k119_1068107                           11112 3 +     12679 ttg
i Macaca_fuscata.k119_1068107                       C 0 C 0
s Macaca_leonina.k141_3421209                             685 3 +      3017 ttg
i Macaca_leonina.k141_3421209                       C 0 C 0
s Macaca_maura.k141_251854                              42297 3 -     79256 ttg
i Macaca_maura.k141_251854                          C 0 C 0
s Macaca_mulatta.NC_041755.1                        196031217 3 + 196197964 TTG
i Macaca_mulatta.NC_041755.1                        C 0 C 0
s Macaca_nemestrina.KQ004885.1                       11441321 3 +  11645122 TTG
i Macaca_nemestrina.KQ004885.1                      C 0 C 0
s Macaca_nigra.k141_282495                               1247 3 -     46448 ttg
i Macaca_nigra.k141_282495                          C 0 C 0
s Macaca_radiata.k141_1580474                            1074 3 -      3617 ttg
i Macaca_radiata.k141_1580474                       C 0 C 0
s Macaca_siberu.k141_741907                             11407 3 -     55006 ttg
i Macaca_siberu.k141_741907                         C 0 C 0
s Macaca_silenus.Contig12                            43836446 3 +  43892939 ttg
i Macaca_silenus.Contig12                           C 0 C 0
s Macaca_thibetana.k99_116940                            3669 3 -      5978 ttg
i Macaca_thibetana.k99_116940                       C 0 C 0
s Macaca_tonkeana.k141_2870633                           1249 3 -     27140 ttg
i Macaca_tonkeana.k141_2870633                      C 0 C 0
s Mandrillus_leucophaeus.scaffold125                 43433110 3 -  43563597 ttg
i Mandrillus_leucophaeus.scaffold125                C 0 C 0
s Mandrillus_sphinx.Contig144                         4445936 3 -   4543643 ttg
i Mandrillus_sphinx.Contig144                       C 0 C 0
s Marmota_marmota.CZRN01000005.1                     36869988 3 +  64221397 gta
i Marmota_marmota.CZRN01000005.1                    C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233            7888 3 +     15977 ttc
i Meriones_unguiculatus.MerUng_scaffold_52233       C 0 C 0
s Mesocricetus_auratus.KB708139.1                     1042836 2 -  26018355 tt-
i Mesocricetus_auratus.KB708139.1                   C 0 C 0
s Microtus_ochrogaster.CM001673.1                    22815199 3 -  98408828 ACT
i Microtus_ochrogaster.CM001673.1                   C 0 C 0
s Miopithecus_ogouensis.k141_2666161                    31784 3 +     34273 ttg
i Miopithecus_ogouensis.k141_2666161                C 0 C 0
s Mus_caroli.LT608236.1                              70761356 3 +  92629107 CTC
i Mus_caroli.LT608236.1                             C 0 C 0
s Mus_musculus.chr16                                 75484431 3 +  98207768 CTC
i Mus_musculus.chr16                                C 0 C 0
s Mus_pahari.LT608305.1                              67548971 3 +  89017189 ctC
i Mus_pahari.LT608305.1                             C 0 C 0
s Mus_spretus.CM004110.1                             74324069 3 +  97876770 CTC
i Mus_spretus.CM004110.1                            C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643          6885 3 +     98495 att
i Muscardinus_avellanarius.MusAve_scaffold_9643     C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                 86094 3 -    117718 tta
i Myocastor_coypus.MyoCoy_scaffold_3653             C 0 C 0
s Nannospalax_galili.KL201303.1                        107157 3 +    362372 ttg
i Nannospalax_galili.KL201303.1                     C 0 C 0
s Nasalis_larvatus.k141_153429                           4149 3 +     48152 ttg
i Nasalis_larvatus.k141_153429                      C 0 C 0
s Nycticebus_bengalensis.LG16                        65563208 3 -  95554990 ttc
i Nycticebus_bengalensis.LG16                       C 0 C 0
s Nycticebus_coucang.k141_2051882                          46 3 +      6470 TTT
i Nycticebus_coucang.k141_2051882                   n 6 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17  65665568 3 +  89412551 ttc
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17 C 0 C 0
s Octodon_degus.JH651621.1                            3674626 3 +  10294119 cta
i Octodon_degus.JH651621.1                          C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821              121017 3 +    145789 acT
i Ondatra_zibethicus.OndZib_scaffold_6821           I 168 C 0
s Onychomys_torridus.OnyTor_scaffold_12578              32961 3 +     62360 ATT
i Onychomys_torridus.OnyTor_scaffold_12578          C 0 C 0
s Pan_paniscus.CM003386.1                           127570780 3 - 205426864 TTG
i Pan_paniscus.CM003386.1                           C 0 C 0
s Pan_troglodytes.CM009241.2                        120147927 3 - 196562556 ttg
i Pan_troglodytes.CM009241.2                        I 50 C 0
s Papio_anubis.CM001492.2                           188151895 3 - 188283584 TTG
i Papio_anubis.CM001492.2                           C 0 C 0
s Papio_cynocephalus.k141_386926                        48107 3 +     76494 ttg
i Papio_cynocephalus.k141_386926                    C 0 C 0
s Papio_hamadryas.Contig15                           47509291 3 +  47705337 ttg
i Papio_hamadryas.Contig15                          C 0 C 0
s Papio_kindae.k141_5458022                             63274 3 -    104429 ttg
i Papio_kindae.k141_5458022                         C 0 C 0
s Papio_papio.k141_3561084                              13058 3 -     29451 ttg
i Papio_papio.k141_3561084                          C 0 C 0
s Papio_ursinus.k141_3762866                            33463 3 +     35859 ttg
i Papio_ursinus.k141_3762866                        C 0 C 0
s Perodicticus_ibeanus.k141_117958                       1211 3 -     23713 ttc
i Perodicticus_ibeanus.k141_117958                  C 0 C 0
s Perodicticus_potto.k141_713187                        20508 3 -     27972 ttc
i Perodicticus_potto.k141_713187                    C 0 C 0
s Peromyscus_maniculatus.KI615518.1                   4946121 2 -   8017169 TT-
i Peromyscus_maniculatus.KI615518.1                 C 0 C 0
s Piliocolobus_badius.k141_1497351                       1150 3 -      3310 ttg
i Piliocolobus_badius.k141_1497351                  C 0 C 0
s Piliocolobus_gordonorum.k141_902470                   21056 3 -     82327 ttg
i Piliocolobus_gordonorum.k141_902470               C 0 C 0
s Piliocolobus_kirkii.k141_557609                       17807 3 +     19957 ttg
i Piliocolobus_kirkii.k141_557609                   C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1           26735816 3 +  26888534 ttg
i Piliocolobus_tephrosceles.PDMG02000036.1          C 0 C 0
s Pithecia_albicans.k141_991845                         39691 3 -     61926 ttg
i Pithecia_albicans.k141_991845                     C 0 C 0
s Pithecia_chrysocephala.k141_159118                    21120 3 +     78826 ttg
i Pithecia_chrysocephala.k141_159118                C 0 C 0
s Pithecia_hirsuta.k141_1152968                          5071 3 -     15800 ttg
i Pithecia_hirsuta.k141_1152968                     C 0 C 0
s Pithecia_mittermeieri.k141_2119203                     8269 3 -     16101 ttg
i Pithecia_mittermeieri.k141_2119203                C 0 C 0
s Pithecia_pissinattii.k141_1102319                      1578 3 +      9673 ttg
i Pithecia_pissinattii.k141_1102319                 C 0 C 0
s Pithecia_pithecia.tarseq_313                       13470572 3 -  19735023 ttg
i Pithecia_pithecia.tarseq_313                      C 0 C 0
s Pithecia_vanzolinii.k141_831006                        9480 3 -     31692 ttg
i Pithecia_vanzolinii.k141_831006                   C 0 C 0
s Plecturocebus_bernhardi.k141_959214                   18844 3 +     44506 ttg
i Plecturocebus_bernhardi.k141_959214               C 0 C 0
s Plecturocebus_brunneus.k141_498086                    19062 3 +     67491 ttg
i Plecturocebus_brunneus.k141_498086                C 0 C 0
s Plecturocebus_caligatus.k141_2539816                   9307 3 -     98129 ttg
i Plecturocebus_caligatus.k141_2539816              C 0 C 0
s Plecturocebus_cinerascens.k141_744510                 18907 3 +    147771 ttg
i Plecturocebus_cinerascens.k141_744510             C 0 C 0
s Plecturocebus_cupreus.k141_1223294                    19158 3 -     23762 ttg
i Plecturocebus_cupreus.k141_1223294                C 0 C 0
s Plecturocebus_dubius.k141_2078842                     19106 3 -     19696 ttg
i Plecturocebus_dubius.k141_2078842                 C 0 C 0
s Plecturocebus_grovesi.k141_242819                     18980 3 +    152463 ttg
i Plecturocebus_grovesi.k141_242819                 C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                  5737 3 +      8943 ttg
i Plecturocebus_hoffmannsi.k141_1595076             C 0 C 0
s Plecturocebus_miltoni.k141_841561                      8697 3 +    134592 ttg
i Plecturocebus_miltoni.k141_841561                 C 0 C 0
s Plecturocebus_moloch.k141_890597                      19290 3 -     75465 ttg
i Plecturocebus_moloch.k141_890597                  C 0 C 0
s Pongo_abelii.NDHI03003816.1                          183333 3 -    373494 TTG
i Pongo_abelii.NDHI03003816.1                       C 0 C 0
s Pongo_pygmaeus.ctg62                               19803236 3 +  19899266 ttg
i Pongo_pygmaeus.ctg62                              C 0 C 0
s Presbytis_comata.k141_672698                           1386 3 -     15069 ttg
i Presbytis_comata.k141_672698                      C 0 C 0
s Presbytis_mitrata.k141_860013                          1520 3 +     14865 ttg
i Presbytis_mitrata.k141_860013                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                       28949 3 +     77221 ttc
i Psammomys_obesus.NESX01026517.1                   C 0 C 0
s Pygathrix_cinerea.k141_374971                         25511 3 +     56732 ttg
i Pygathrix_cinerea.k141_374971                     C 0 C 0
s Pygathrix_nigripes_b.ctg79                             6802001 3 +   6970761 ttg
i Pygathrix_nigripes_b.ctg79                           C 0 C 0
s Pygathrix_nigripes_a.k141_101123                         1393 3 +     18040 ttg
i Pygathrix_nigripes_a.k141_101123                    C 0 C 0
s Rattus_norvegicus.chr11                            13910893 3 +  90463843 CTC
i Rattus_norvegicus.chr11                           C 0 C 0
s Rhinopithecus_bieti.k119_102124                       11948 3 -     14454 ttg
i Rhinopithecus_bieti.k119_102124                   C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1               206373274 3 - 206558726 ttg
i Rhinopithecus_roxellana.NC_044549.1               C 0 C 0
s Rhinopithecus_strykeri.ctg4                        44850922 3 -  45163003 ttg
i Rhinopithecus_strykeri.ctg4                       C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                 15668715 3 -  43202129 TTG
i Saimiri_boliviensis.NW_024100938.1                C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                     590 3 +     34089 ttg
i Saimiri_cassiquiarensis.k141_808270               C 0 C 0
s Saimiri_macrodon.k141_2087127                           521 3 -     60842 ttg
i Saimiri_macrodon.k141_2087127                     C 0 C 0
s Saimiri_oerstedii.k141_841116                           590 3 +     67014 ttg
i Saimiri_oerstedii.k141_841116                     C 0 C 0
s Saimiri_sciureus.k141_1947592                           590 3 +     60816 ttg
i Saimiri_sciureus.k141_1947592                     C 0 C 0
s Saimiri_ustus.k141_1282476                              518 3 -     76454 ttg
i Saimiri_ustus.k141_1282476                        C 0 C 0
s Sapajus_apella.ctg10                               17337098 3 -  30362882 ttg
i Sapajus_apella.ctg10                              C 0 C 0
s Sapajus_macrocephalus.k141_966464                     16699 3 -     62485 ttg
i Sapajus_macrocephalus.k141_966464                 C 0 C 0
s Semnopithecus_entellus.k141_1527475                   23936 3 +     26421 ttg
i Semnopithecus_entellus.k141_1527475               C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                   4398 3 +     20762 ttg
i Semnopithecus_hypoleucos.k141_761524              C 0 C 0
s Semnopithecus_johnii.k141_1351450                     38131 3 +     40653 ttg
i Semnopithecus_johnii.k141_1351450                 C 0 C 0
s Semnopithecus_priam.k141_198153                        8690 3 -     12194 ttg
i Semnopithecus_priam.k141_198153                   C 0 C 0
s Semnopithecus_schistaceus.k141_653647                 22109 3 -     27512 ttg
i Semnopithecus_schistaceus.k141_653647             C 0 C 0
s Semnopithecus_vetulus.k141_642050                     31130 3 -     33692 ttg
i Semnopithecus_vetulus.k141_642050                 C 0 C 0
s Spermophilus_dauricus.KZ294190.1                    2236070 3 +   2842873 ata
i Spermophilus_dauricus.KZ294190.1                  C 0 C 0
s Symphalangus_syndactylus.tarseq_24                 13898060 3 +  13920577 ttg
i Symphalangus_syndactylus.tarseq_24                I 50 C 0
s Tarsius_lariang.k141_609102                           22845 3 +     42269 tcg
i Tarsius_lariang.k141_609102                       C 0 C 0
s Tarsius_wallacei.k141_48636                           56153 3 +     65473 tcg
i Tarsius_wallacei.k141_48636                       C 0 C 0
s Theropithecus_gelada.CM009951.1                   194003430 3 - 194193292 TTG
i Theropithecus_gelada.CM009951.1                   C 0 C 0
s Trachypithecus_auratus.k141_738098                    22508 3 +     38948 ttg
i Trachypithecus_auratus.k141_738098                C 0 C 0
s Trachypithecus_crepusculus.k141_1588528               16235 3 -     32910 ttg
i Trachypithecus_crepusculus.k141_1588528           C 0 C 0
s Trachypithecus_cristatus.k141_27198                   22133 3 +     24652 ttg
i Trachypithecus_cristatus.k141_27198               C 0 C 0
s Trachypithecus_francoisi.k141_1178450                  1018 3 -      3559 ttg
i Trachypithecus_francoisi.k141_1178450             C 0 C 0
s Trachypithecus_geei.k141_670367                       38957 3 -     54611 ttg
i Trachypithecus_geei.k141_670367                   C 0 C 0
s Trachypithecus_germaini.k141_809503                   14956 3 +     17312 ttg
i Trachypithecus_germaini.k141_809503               C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                22326 3 -     25040 ttg
i Trachypithecus_hatinhensis.k141_357672            C 0 C 0
s Trachypithecus_laotum.k141_171445                       992 3 +      3528 ttg
i Trachypithecus_laotum.k141_171445                 C 0 C 0
s Trachypithecus_leucocephalus.k141_283605              47354 3 +     51589 ttg
i Trachypithecus_leucocephalus.k141_283605          C 0 C 0
s Trachypithecus_melamera.k141_238507                   10522 3 +     14732 ttg
i Trachypithecus_melamera.k141_238507               C 0 C 0
s Trachypithecus_obscurus.k141_1115109                   1000 3 -     28054 ttg
i Trachypithecus_obscurus.k141_1115109              C 0 C 0
s Trachypithecus_phayrei.ctg3                        44655795 3 -  44834318 ttg
i Trachypithecus_phayrei.ctg3                       C 0 C 0
s Trachypithecus_pileatus.k141_469329                     805 3 +      3372 ttg
i Trachypithecus_pileatus.k141_469329               C 0 C 0
s Tupaia_chinensis.KB320831.1                         2786501 3 -   3938065 tta
i Tupaia_chinensis.KB320831.1                       I 263 I 404
s Tupaia_tana.TupTan_flattened_line_251551               4649 3 -      5019 tta
i Tupaia_tana.TupTan_flattened_line_251551          C 0 N 0
s Xerus_inauris.XerIna_scaffold_7898                   123252 3 -    134049 tta
i Xerus_inauris.XerIna_scaffold_7898                C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                 12039 3 -     20485 TTG
i Zapus_hudsonius.ZapHud_scaffold_64392             C 0 C 0
e Hylobates_pileatus_b.LG03                                 92553610 0 - 189753342 C
e Varecia_variegata.k141_775891                         21225 0 -     33872 C
e Varecia_rubra.k141_432109                              1680 0 -     20643 C
e Sigmodon_hispidus.SigHis_scaffold_11332               94219 0 -    120886 C
e Propithecus_verreauxi.k141_158021                     35429 0 -     48185 C
e Propithecus_tattersalli.k141_907138                   13158 0 -     53241 C
e Propithecus_perrieri.k141_7554                        13514 0 +     27322 C
e Propithecus_edwardsi.k141_1317105                     31592 0 -     44753 C
e Propithecus_diadema.k141_577245                       39203 0 +     52369 C
e Propithecus_coronatus.k141_844990                     30766 0 +     30823 C
e Propithecus_coquerelli.NW_012147997.1                664014 0 -   2312742 C
e Prolemur_simus.MPIZ01000048.1                       6844734 0 +  12164890 C
e Otolemur_garnettii.GL873528.1                      18004869 68 -  38779656 I
e Otolemur_crassicaudatus.k141_321880                   35431 68 +     38679 I
e Mirza_zaza.k141_226143                                 1888 0 +      8497 C
e Microcebus_murinus.CM007691.1                      16506476 0 +  47401472 C
e Lepilemur_septentrionalis.k141_578524                 27890 0 -     33031 C
e Lepilemur_ruficaudatus.k141_617879                    74850 0 +    116806 C
e Lepilemur_dorsalis.k141_134267                        49630 0 +     63517 C
e Lepilemur_ankaranensis.k141_884009                    20254 0 +     39228 C
e Lemur_catta.scaffold_1                            258403361 0 - 285822530 C
e Indri_indri.k141_3334527                               8321 0 +      9207 C
e Hapalemur_occidentalis.k141_797938                    41683 0 -     54384 C
e Hapalemur_meridionalis.k141_186231                    25085 0 -     42470 C
e Hapalemur_griseus.k141_1387522                         1812 0 +     56096 C
e Hapalemur_gilberti.k141_97962                         24358 0 +     26611 C
e Hapalemur_alaotrensis.k141_1198205                     1878 0 +      3980 C
e Galagoides_demidoff.k141_1769638                       6763 68 +     27357 I
e Galago_senegalensis.k141_964197                        9743 68 -     43889 I
e Galago_moholi.ctg555                                 207363 68 -    847004 I
e Eulemur_sanfordi.k141_186399                          12109 0 -     29447 C
e Eulemur_rufus.k141_1620292                            29386 0 +     46535 C
e Eulemur_rubriventer.k141_411740                       14652 0 +     26808 C
e Eulemur_mongoz.k141_825972                            12196 0 +     27497 C
e Eulemur_macaco.k141_1341545                           11919 0 +     16540 C
e Eulemur_fulvus.k141_653297                             7545 0 +    109717 C
e Eulemur_flavifrons.k141_903901                         4057 0 +     60246 C
e Eulemur_coronatus.k141_3240342                         7740 0 +     36558 C
e Eulemur_collaris.k141_311830                           1270 0 -      6809 C
e Eulemur_albifrons.k141_715837                          1333 0 +     13586 C
e Cheirogaleus_medius.k141_133808                        4309 0 +     13308 C
e Cheirogaleus_major.k141_1157592                       55259 0 -     68416 C
e Avahi_peyrierasi.k141_767228                           8896 0 -      9688 C
e Avahi_laniger.k141_2840928                             2923 0 -     16375 C
e Nomascus_siki_b.tarseq_80                         20456 0 -  18771707 C
e Nomascus_annamensis.k141_745421                         374 0 -      4569 C
e Nomascus_gabriellae.k141_1350167                        785 0 +      9928 C

a score=0.000000
s hg38.chr4_GL000008v2_random                            8049 3 +    209709 tt---a
s Acomys_cahirinus.AcoCah_scaffold_1625                108442 3 -    189883 TT---T
i Acomys_cahirinus.AcoCah_scaffold_1625             C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                8733 3 -     22067 TT---C
i Allactaga_bullata.AllBul_scaffold_70162           C 0 C 0
s Allenopithecus_nigroviridis.k141_3103707              59071 3 +     61638 tt---c
i Allenopithecus_nigroviridis.k141_3103707          C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                    50879 3 +     53391 tt---c
i Allochrocebus_lhoesti.k141_4825038                C 0 C 0
s Allochrocebus_preussi.k141_1202907                     1603 3 +     72529 tt---c
i Allochrocebus_preussi.k141_1202907                C 0 C 0
s Allochrocebus_solatus.k141_787528                      1180 3 +      3797 tt---c
i Allochrocebus_solatus.k141_787528                 C 0 C 0
s Alouatta_belzebul.k141_1818029                         6265 3 -     18050 tt---c
i Alouatta_belzebul.k141_1818029                    C 0 C 0
s Alouatta_caraya.k141_5460                              7382 3 -     11521 tt---c
i Alouatta_caraya.k141_5460                         C 0 C 0
s Alouatta_discolor.k141_811576                          6940 3 -     21359 tt---c
i Alouatta_discolor.k141_811576                     C 0 C 0
s Alouatta_juara.k141_1856473                            5323 3 +      7227 tt---c
i Alouatta_juara.k141_1856473                       C 0 C 0
s Alouatta_macconnelli.k141_1331706                      6238 3 -     10438 tt---c
i Alouatta_macconnelli.k141_1331706                 C 0 C 0
s Alouatta_nigerrima.k141_2718643                        2892 3 +      7047 tt---c
i Alouatta_nigerrima.k141_2718643                   C 0 C 0
s Alouatta_palliata.k141_1316127                         6176 3 +     10410 tt---c
i Alouatta_palliata.k141_1316127                    C 0 C 0
s Alouatta_puruensis.k141_390786                         7453 3 -      7615 tt---c
i Alouatta_puruensis.k141_390786                    C 0 C 0
s Alouatta_seniculus.k141_990213                         2897 3 +      6429 tt---c
i Alouatta_seniculus.k141_990213                    C 0 C 0
s Aotus_azarae.k141_3170768                             58580 3 +     78111 tt---c
i Aotus_azarae.k141_3170768                         C 0 C 0
s Aotus_griseimembra.k141_3275623                        1511 3 +     22701 tt---c
i Aotus_griseimembra.k141_3275623                   C 0 C 0
s Aotus_nancymaae.KZ196176.1                          5745471 3 +   9889416 tt---c
i Aotus_nancymaae.KZ196176.1                        C 0 C 0
s Aotus_trivirgatus.k141_1740727                         2063 3 -    104377 tt---c
i Aotus_trivirgatus.k141_1740727                    C 0 C 0
s Aotus_vociferans.k141_718647                           2063 3 +     23246 tt---c
i Aotus_vociferans.k141_718647                      C 0 C 0
s Arctocebus_calabarensis.k141_1161114                  14366 3 +     17483 tt---c
i Arctocebus_calabarensis.k141_1161114              C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                         9535324 3 +  39197703 tt---c
i Ateles_geoffroyi_b.tarseq_2582                       C 0 C 0
s Ateles_belzebuth.k141_1348307                         56612 3 +     85812 tt---c
i Ateles_belzebuth.k141_1348307                     C 0 C 0
s Ateles_chamek.k141_1072810                             7609 3 +     89302 tt---c
i Ateles_chamek.k141_1072810                        C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                         12118 3 -     58268 tt---c
i Ateles_geoffroyi_a.k141_1300742                     C 0 C 0
s Ateles_marginatus.k141_899112                         60106 3 +    119057 tt---c
i Ateles_marginatus.k141_899112                     C 0 C 0
s Ateles_paniscus.k141_1631200                           2057 3 -     25888 tt---c
i Ateles_paniscus.k141_1631200                      C 0 C 0
s Avahi_laniger.k141_2840928                             2923 3 -     16375 tt---c
i Avahi_laniger.k141_2840928                        C 0 C 0
s Avahi_peyrierasi.k141_767228                           8896 3 -      9688 tt---c
i Avahi_peyrierasi.k141_767228                      C 0 C 0
s Cacajao_ayresi.k141_724503                           109981 3 -    171031 tt---c
i Cacajao_ayresi.k141_724503                        C 0 C 0
s Cacajao_calvus.k141_96166                              9007 3 +    125063 tt---c
i Cacajao_calvus.k141_96166                         C 0 C 0
s Cacajao_hosomi.k141_303789                            11055 3 -    216513 tt---c
i Cacajao_hosomi.k141_303789                        C 0 C 0
s Cacajao_melanocephalus.k141_1160263                    3594 3 -    134917 tt---c
i Cacajao_melanocephalus.k141_1160263               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_647363               346 3 +      1887 tt---c
i Capromys_pilorides.CapPil_scaffold_647363         C 0 C 0
s Carlito_syrichta.NW_007248099.1                      305363 3 +    345090 CT---C
i Carlito_syrichta.NW_007248099.1                   C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037               26911 3 +     33760 ct---c
i Castor_canadensis.CasCan_scaffold_47037           C 0 C 0
s Cavia_aperea.AVPZ01000278.1                        15783645 3 -  24422027 tt---c
i Cavia_aperea.AVPZ01000278.1                       C 0 C 0
s Cavia_porcellus.DS562889.1                         15795579 3 -  24440124 tt---c
i Cavia_porcellus.DS562889.1                        C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                   173770 3 +    436027 tt---c
i Cavia_tschudii.CavTsc_scaffold_488                C 0 C 0
s Cebus_albifrons.Contig22                           18886792 3 -  29618158 tt---c
i Cebus_albifrons.Contig22                          C 0 C 0
s Cebus_olivaceus.k141_93739                             4338 3 -     26817 tt---c
i Cebus_olivaceus.k141_93739                        C 0 C 0
s Cebus_unicolor.k141_239009                             8578 3 +     25043 tt---c
i Cebus_unicolor.k141_239009                        C 0 C 0
s Cephalopachus_bancanus.k141_702587                     4399 3 +     21754 ct---c
i Cephalopachus_bancanus.k141_702587                C 0 C 0
s Cercocebus_atys.KQ010443.1                          6550867 3 +   6739814 TT---C
i Cercocebus_atys.KQ010443.1                        C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                  52344 3 -     54931 tt---c
i Cercocebus_chrysogaster.k141_2951608              C 0 C 0
s Cercocebus_lunulatus.k141_3387186                     17328 3 -     19697 tt---c
i Cercocebus_lunulatus.k141_3387186                 C 0 C 0
s Cercocebus_torquatus.k141_3969582                     54859 3 -    107033 tt---c
i Cercocebus_torquatus.k141_3969582                 C 0 C 0
s Cercopithecus_ascanius.k141_3371259                    1302 3 -      3853 tt---c
i Cercopithecus_ascanius.k141_3371259               C 0 C 0
s Cercopithecus_cephus.k141_598190                      25234 3 +     30494 tt---c
i Cercopithecus_cephus.k141_598190                  C 0 C 0
s Cercopithecus_diana.k141_1490386                       1257 3 -      4022 tt---c
i Cercopithecus_diana.k141_1490386                  C 0 C 0
s Cercopithecus_hamlyni.k141_381099                      1147 3 -      3505 tt---c
i Cercopithecus_hamlyni.k141_381099                 C 0 C 0
s Cercopithecus_lowei.k141_623764                       19958 3 +     35983 tt---c
i Cercopithecus_lowei.k141_623764                   C 0 C 0
s Cercopithecus_albogularis.ctg51                          11985734 3 +  12117833 tt---c
i Cercopithecus_albogularis.ctg51                         C 0 C 0
s Cercopithecus_mona.ctg12                           46473230 3 +  46592721 tt---c
i Cercopithecus_mona.ctg12                          C 0 C 0
s Cercopithecus_neglectus.k141_1474992                  31057 3 +     33420 tt---c
i Cercopithecus_neglectus.k141_1474992              C 0 C 0
s Cercopithecus_nictitans.k141_675209                    1093 3 -      3443 tt---c
i Cercopithecus_nictitans.k141_675209               C 0 C 0
s Cercopithecus_petaurista.k141_2037881                  2084 3 -      4669 tt---c
i Cercopithecus_petaurista.k141_2037881             C 0 C 0
s Cercopithecus_pogonias.k141_1977419                    1888 3 -      4411 tt---c
i Cercopithecus_pogonias.k141_1977419               C 0 C 0
s Cercopithecus_roloway.k141_3372345                     1408 3 -      4205 tt---c
i Cercopithecus_roloway.k141_3372345                C 0 C 0
s Cheirogaleus_major.k141_1157592                       55259 3 -     68416 tt---c
i Cheirogaleus_major.k141_1157592                   C 0 C 0
s Cheirogaleus_medius.k141_133808                        4309 3 +     13308 tt---g
i Cheirogaleus_medius.k141_133808                   C 0 C 0
s Cheracebus_lucifer.k141_619653                         1591 3 -     18223 tt---c
i Cheracebus_lucifer.k141_619653                    C 0 C 0
s Cheracebus_lugens.k141_203936                         18614 3 +     25473 tt---c
i Cheracebus_lugens.k141_203936                     C 0 C 0
s Cheracebus_regulus.k141_2128895                       37653 3 +     57117 tt---c
i Cheracebus_regulus.k141_2128895                   C 0 C 0
s Cheracebus_torquatus.k141_315545                      42328 3 +     54541 tt---c
i Cheracebus_torquatus.k141_315545                  C 0 C 0
s Chinchilla_lanigera.JH721867.1                     15957772 3 +  43084221 tt---c
i Chinchilla_lanigera.JH721867.1                    C 0 C 0
s Chiropotes_israelita.k141_1189915                     67202 3 +    196370 tt---c
i Chiropotes_israelita.k141_1189915                 C 0 C 0
s Chiropotes_sagulatus.k141_773804                      11376 3 +     40510 tt---c
i Chiropotes_sagulatus.k141_773804                  C 0 C 0
s Chlorocebus_aethiops.ctg22                         15134688 3 -  15256731 tt---c
i Chlorocebus_aethiops.ctg22                        C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                  29734 3 -     53260 tt---c
i Chlorocebus_pygerythrus.k141_1486215              C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                    101140182 3 + 101219884 TT---C
i Chlorocebus_sabaeus.CM001963.2                    C 0 C 0
s Colobus_angolensis.KN985967.1                      10878764 3 +  10971483 tt---c
i Colobus_angolensis.KN985967.1                     C 0 C 0
s Colobus_guereza.LG08                              147659923 3 + 156195979 tt---c
i Colobus_guereza.LG08                              C 0 C 0
s Colobus_polykomos.k141_1406057                        11908 3 +     23629 tt---c
i Colobus_polykomos.k141_1406057                    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949             273879 3 -    399297 tt---t
i Cricetomys_gambianus.CriGam_scaffold_949          C 0 C 0
s Cricetulus_griseus.LT883672.1                      53025356 3 +  72327488 at---t
i Cricetulus_griseus.LT883672.1                     C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447              204592 3 -    956709 GT---C
i Ctenodactylus_gundi.CteGun_scaffold_447           C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489             26506 1 -     67205 t-----
i Ctenomys_sociabilis.CteSoc_scaffold_19489         C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637            14524 3 +     26546 ag---c
i Cuniculus_paca.CunPac_flattened_line_16637        C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634         55997 3 -    236241 tt---c
i Dasyprocta_punctata.DasPun_flattened_line_634     C 0 C 0
s Daubentonia_madagascariensis.ctg11                 16841125 3 +  31942871 tt---c
i Daubentonia_madagascariensis.ctg11                C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102            33157 3 -     73477 tt---c
i Dolichotis_patagonum.DolPat_scaffold_14102        C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                    235542 3 -    369425 TT---T
i Ellobius_lutescens.LOEQ01003611.1                 C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                       2551 3 -      7838 TT---T
i Ellobius_talpinus.LOJH01090055.1                  C 0 C 0
s Erythrocebus_patas.Contig8                         48766867 3 -  48907691 tt---c
i Erythrocebus_patas.Contig8                        C 0 C 0
s Eulemur_albifrons.k141_715837                          1333 3 +     13586 tt---c
i Eulemur_albifrons.k141_715837                     C 0 C 0
s Eulemur_collaris.k141_311830                           1270 3 -      6809 tt---c
i Eulemur_collaris.k141_311830                      C 0 C 0
s Eulemur_coronatus.k141_3240342                         7740 3 +     36558 tt---c
i Eulemur_coronatus.k141_3240342                    C 0 C 0
s Eulemur_flavifrons.k141_903901                         4057 3 +     60246 tt---c
i Eulemur_flavifrons.k141_903901                    C 0 C 0
s Eulemur_fulvus.k141_653297                             7545 3 +    109717 tt---c
i Eulemur_fulvus.k141_653297                        C 0 C 0
s Eulemur_macaco.k141_1341545                           11919 3 +     16540 tt---c
i Eulemur_macaco.k141_1341545                       C 0 C 0
s Eulemur_mongoz.k141_825972                            12196 3 +     27497 tt---c
i Eulemur_mongoz.k141_825972                        C 0 C 0
s Eulemur_rubriventer.k141_411740                       14652 3 +     26808 tg---c
i Eulemur_rubriventer.k141_411740                   C 0 C 0
s Eulemur_rufus.k141_1620292                            29386 3 +     46535 tt---c
i Eulemur_rufus.k141_1620292                        C 0 C 0
s Eulemur_sanfordi.k141_186399                          12109 3 -     29447 tt---c
i Eulemur_sanfordi.k141_186399                      C 0 C 0
s Fukomys_damarensis.KN123630.1                      13889330 3 -  19261668 tt---c
i Fukomys_damarensis.KN123630.1                     C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354           152587 3 +    324696 ct---c
i Galeopterus_variegatus.GalVar_scaffold_354        C 0 C 0
s Gorilla_beringei.k141_111300                           1441 3 -     14630 tt---a
i Gorilla_beringei.k141_111300                      C 0 C 0
s Gorilla_gorilla.LT578340.1                        119648539 3 - 195582420 tt---a
i Gorilla_gorilla.LT578340.1                        C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493               73571 3 +    118900 GT---C
i Graphiurus_murinus.GraMur_scaffold_4493           C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                     1878 3 +      3980 tt---c
i Hapalemur_alaotrensis.k141_1198205                C 0 C 0
s Hapalemur_gilberti.k141_97962                         24358 3 +     26611 tt---c
i Hapalemur_gilberti.k141_97962                     C 0 C 0
s Hapalemur_griseus.k141_1387522                         1812 3 +     56096 tt---c
i Hapalemur_griseus.k141_1387522                    C 0 C 0
s Hapalemur_meridionalis.k141_186231                    25085 3 -     42470 tt---c
i Hapalemur_meridionalis.k141_186231                C 0 C 0
s Hapalemur_occidentalis.k141_797938                    41683 3 -     54384 tt---c
i Hapalemur_occidentalis.k141_797938                C 0 C 0
s Heterocephalus_glaber.JH602058.1                    2547318 3 +  31725842 tt---c
i Heterocephalus_glaber.JH602058.1                  C 0 C 0
s Hoolock_leuconedys.ctg649                                98113 3 +    115816 tt---a
i Hoolock_leuconedys.ctg649                            C 0 C 0
s Hylobates_abbotti.k141_493872                          1250 3 +      5897 tt---t
i Hylobates_abbotti.k141_493872                     C 0 C 0
s Hylobates_agilis.k141_282275                            463 3 +      1846 tt---a
i Hylobates_agilis.k141_282275                      C 0 C 0
s Hylobates_klossii.k141_466549                          7708 3 +     11537 tt---a
i Hylobates_klossii.k141_466549                     C 0 C 0
s Hylobates_muelleri.k141_1133650                         685 3 -      2775 tt---a
i Hylobates_muelleri.k141_1133650                   C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                 2311 3 +     22540 tt---c
i Hystrix_cristata.HysCri_scaffold_50788            C 0 I 13
s Ictidomys_tridecemlineatus.JH393315.1               7122147 3 +  13083262 tt---t
i Ictidomys_tridecemlineatus.JH393315.1             C 0 C 0
s Indri_indri.k141_3334527                               8321 3 +      9207 tt---c
i Indri_indri.k141_3334527                          C 0 C 0
s Jaculus_jaculus.JH725517.1                          8561694 3 +  11848649 TC---C
i Jaculus_jaculus.JH725517.1                        C 0 C 0
s Lagothrix_lagothricha.k141_12968                      46167 3 -    147782 tt---c
i Lagothrix_lagothricha.k141_12968                  C 0 C 0
s Lemur_catta.scaffold_1                            258403361 3 - 285822530 tt---c
i Lemur_catta.scaffold_1                            C 0 C 0
s Lepilemur_ankaranensis.k141_884009                    20254 3 +     39228 tt---c
i Lepilemur_ankaranensis.k141_884009                C 0 C 0
s Lepilemur_dorsalis.k141_134267                        49630 3 +     63517 tt---c
i Lepilemur_dorsalis.k141_134267                    C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                    74850 3 +    116806 tt---c
i Lepilemur_ruficaudatus.k141_617879                C 0 C 0
s Lepilemur_septentrionalis.k141_578524                 27890 3 -     33031 tt---c
i Lepilemur_septentrionalis.k141_578524             C 0 C 0
s Lophocebus_aterrimus.ctg55                         19243953 3 +  19376315 tt---c
i Lophocebus_aterrimus.ctg55                        C 0 C 0
s Loris_lydekkerianus.k141_550999                        6863 3 +     84689 tt---c
i Loris_lydekkerianus.k141_550999                   C 0 C 0
s Loris_tardigradus.ctg97                             3774622 3 +   6799190 tt---c
i Loris_tardigradus.ctg97                           C 0 C 0
s Macaca_arctoides.k141_2201161                         15639 3 +     74745 tt---c
i Macaca_arctoides.k141_2201161                     C 0 C 0
s Macaca_assamensis.Contig65                         12702145 3 +  12821369 tt---c
i Macaca_assamensis.Contig65                        C 0 C 0
s Macaca_cyclopis.k119_1168412                           4238 3 +      6569 tt---c
i Macaca_cyclopis.k119_1168412                      C 0 C 0
s Macaca_fascicularis.k141_155037                       42538 3 +     63263 tt---c
i Macaca_fascicularis.k141_155037                   C 0 C 0
s Macaca_fuscata.k119_1068107                           11115 3 +     12679 tt---c
i Macaca_fuscata.k119_1068107                       C 0 C 0
s Macaca_leonina.k141_3421209                             688 3 +      3017 tt---c
i Macaca_leonina.k141_3421209                       C 0 C 0
s Macaca_maura.k141_251854                              42300 3 -     79256 tt---c
i Macaca_maura.k141_251854                          C 0 C 0
s Macaca_mulatta.NC_041755.1                        196031220 3 + 196197964 TT---C
i Macaca_mulatta.NC_041755.1                        C 0 C 0
s Macaca_nemestrina.KQ004885.1                       11441324 3 +  11645122 TT---C
i Macaca_nemestrina.KQ004885.1                      C 0 C 0
s Macaca_nigra.k141_282495                               1250 3 -     46448 tt---c
i Macaca_nigra.k141_282495                          C 0 C 0
s Macaca_radiata.k141_1580474                            1077 3 -      3617 tt---c
i Macaca_radiata.k141_1580474                       C 0 C 0
s Macaca_siberu.k141_741907                             11410 3 -     55006 tt---c
i Macaca_siberu.k141_741907                         C 0 C 0
s Macaca_silenus.Contig12                            43836449 3 +  43892939 tt---c
i Macaca_silenus.Contig12                           C 0 C 0
s Macaca_thibetana.k99_116940                            3672 3 -      5978 tt---c
i Macaca_thibetana.k99_116940                       C 0 C 0
s Macaca_tonkeana.k141_2870633                           1252 3 -     27140 tt---c
i Macaca_tonkeana.k141_2870633                      C 0 C 0
s Mandrillus_leucophaeus.scaffold125                 43433113 3 -  43563597 tt---c
i Mandrillus_leucophaeus.scaffold125                C 0 C 0
s Mandrillus_sphinx.Contig144                         4445939 3 -   4543643 tt---c
i Mandrillus_sphinx.Contig144                       C 0 C 0
s Marmota_marmota.CZRN01000005.1                     36869991 3 +  64221397 tt---t
i Marmota_marmota.CZRN01000005.1                    C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233            7891 3 +     15977 tt---t
i Meriones_unguiculatus.MerUng_scaffold_52233       C 0 C 0
s Mesocricetus_auratus.KB708139.1                     1042838 3 -  26018355 tt---t
i Mesocricetus_auratus.KB708139.1                   C 0 C 0
s Microcebus_murinus.CM007691.1                      16506476 3 +  47401472 TT---C
i Microcebus_murinus.CM007691.1                     C 0 C 0
s Microtus_ochrogaster.CM001673.1                    22815202 3 -  98408828 TT---T
i Microtus_ochrogaster.CM001673.1                   C 0 C 0
s Miopithecus_ogouensis.k141_2666161                    31787 3 +     34273 tt---c
i Miopithecus_ogouensis.k141_2666161                C 0 C 0
s Mirza_zaza.k141_226143                                 1888 3 +      8497 tt---c
i Mirza_zaza.k141_226143                            C 0 C 0
s Mus_caroli.LT608236.1                              70761359 3 +  92629107 TT---T
i Mus_caroli.LT608236.1                             C 0 C 0
s Mus_musculus.chr16                                 75484434 3 +  98207768 TT---T
i Mus_musculus.chr16                                C 0 C 0
s Mus_pahari.LT608305.1                              67548974 3 +  89017189 TT---T
i Mus_pahari.LT608305.1                             C 0 C 0
s Mus_spretus.CM004110.1                             74324072 3 +  97876770 TT---T
i Mus_spretus.CM004110.1                            C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643          6888 3 +     98495 tt---c
i Muscardinus_avellanarius.MusAve_scaffold_9643     C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                 86097 3 -    117718 tt---c
i Myocastor_coypus.MyoCoy_scaffold_3653             C 0 C 0
s Nannospalax_galili.KL201303.1                        107160 3 +    362372 tt---c
i Nannospalax_galili.KL201303.1                     C 0 C 0
s Nasalis_larvatus.k141_153429                           4152 3 +     48152 tt---c
i Nasalis_larvatus.k141_153429                      C 0 C 0
s Nycticebus_bengalensis.LG16                        65563211 3 -  95554990 tt---c
i Nycticebus_bengalensis.LG16                       C 0 C 0
s Nycticebus_coucang.k141_2051882                          49 3 +      6470 TT---C
i Nycticebus_coucang.k141_2051882                   C 0 I 102
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17  65665571 6 +  89412551 ttcttc
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17 C 0 C 0
s Octodon_degus.JH651621.1                            3674629 3 +  10294119 tt---c
i Octodon_degus.JH651621.1                          C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821              121020 3 +    145789 TT---T
i Ondatra_zibethicus.OndZib_scaffold_6821           C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578              32964 3 +     62360 TT---T
i Onychomys_torridus.OnyTor_scaffold_12578          C 0 C 0
s Pan_paniscus.CM003386.1                           127570783 3 - 205426864 TT---A
i Pan_paniscus.CM003386.1                           C 0 C 0
s Pan_troglodytes.CM009241.2                        120147930 3 - 196562556 tt---a
i Pan_troglodytes.CM009241.2                        C 0 I 29
s Papio_anubis.CM001492.2                           188151898 3 - 188283584 TT---C
i Papio_anubis.CM001492.2                           C 0 C 0
s Papio_cynocephalus.k141_386926                        48110 3 +     76494 tt---c
i Papio_cynocephalus.k141_386926                    C 0 C 0
s Papio_hamadryas.Contig15                           47509294 3 +  47705337 tt---c
i Papio_hamadryas.Contig15                          C 0 C 0
s Papio_kindae.k141_5458022                             63277 3 -    104429 tt---c
i Papio_kindae.k141_5458022                         C 0 C 0
s Papio_papio.k141_3561084                              13061 3 -     29451 tt---c
i Papio_papio.k141_3561084                          C 0 C 0
s Papio_ursinus.k141_3762866                            33466 3 +     35859 tt---c
i Papio_ursinus.k141_3762866                        C 0 C 0
s Perodicticus_ibeanus.k141_117958                       1214 3 -     23713 tt---c
i Perodicticus_ibeanus.k141_117958                  C 0 C 0
s Perodicticus_potto.k141_713187                        20511 3 -     27972 tt---c
i Perodicticus_potto.k141_713187                    C 0 C 0
s Peromyscus_maniculatus.KI615518.1                   4946123 3 -   8017169 TT---T
i Peromyscus_maniculatus.KI615518.1                 C 0 C 0
s Piliocolobus_badius.k141_1497351                       1153 3 -      3310 tt---c
i Piliocolobus_badius.k141_1497351                  C 0 C 0
s Piliocolobus_gordonorum.k141_902470                   21059 3 -     82327 tt---c
i Piliocolobus_gordonorum.k141_902470               C 0 C 0
s Piliocolobus_kirkii.k141_557609                       17810 3 +     19957 tt---c
i Piliocolobus_kirkii.k141_557609                   C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1           26735819 3 +  26888534 tt---c
i Piliocolobus_tephrosceles.PDMG02000036.1          C 0 C 0
s Pithecia_albicans.k141_991845                         39694 3 -     61926 tt---c
i Pithecia_albicans.k141_991845                     C 0 C 0
s Pithecia_chrysocephala.k141_159118                    21123 3 +     78826 tt---c
i Pithecia_chrysocephala.k141_159118                C 0 C 0
s Pithecia_hirsuta.k141_1152968                          5074 3 -     15800 tt---c
i Pithecia_hirsuta.k141_1152968                     C 0 C 0
s Pithecia_mittermeieri.k141_2119203                     8272 3 -     16101 tt---c
i Pithecia_mittermeieri.k141_2119203                C 0 C 0
s Pithecia_pissinattii.k141_1102319                      1581 3 +      9673 tt---c
i Pithecia_pissinattii.k141_1102319                 C 0 C 0
s Pithecia_pithecia.tarseq_313                       13470575 3 -  19735023 tt---c
i Pithecia_pithecia.tarseq_313                      C 0 C 0
s Pithecia_vanzolinii.k141_831006                        9483 3 -     31692 tt---c
i Pithecia_vanzolinii.k141_831006                   C 0 C 0
s Plecturocebus_bernhardi.k141_959214                   18847 3 +     44506 tt---c
i Plecturocebus_bernhardi.k141_959214               C 0 C 0
s Plecturocebus_brunneus.k141_498086                    19065 3 +     67491 tt---c
i Plecturocebus_brunneus.k141_498086                C 0 C 0
s Plecturocebus_caligatus.k141_2539816                   9310 3 -     98129 tt---c
i Plecturocebus_caligatus.k141_2539816              C 0 C 0
s Plecturocebus_cinerascens.k141_744510                 18910 3 +    147771 tt---c
i Plecturocebus_cinerascens.k141_744510             C 0 C 0
s Plecturocebus_cupreus.k141_1223294                    19161 3 -     23762 tt---c
i Plecturocebus_cupreus.k141_1223294                C 0 C 0
s Plecturocebus_dubius.k141_2078842                     19109 3 -     19696 tt---c
i Plecturocebus_dubius.k141_2078842                 C 0 C 0
s Plecturocebus_grovesi.k141_242819                     18983 3 +    152463 tt---c
i Plecturocebus_grovesi.k141_242819                 C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                  5740 3 +      8943 tt---c
i Plecturocebus_hoffmannsi.k141_1595076             C 0 C 0
s Plecturocebus_miltoni.k141_841561                      8700 3 +    134592 tt---c
i Plecturocebus_miltoni.k141_841561                 C 0 C 0
s Plecturocebus_moloch.k141_890597                      19293 3 -     75465 tt---c
i Plecturocebus_moloch.k141_890597                  C 0 C 0
s Pongo_abelii.NDHI03003816.1                          183336 3 -    373494 TT---A
i Pongo_abelii.NDHI03003816.1                       C 0 C 0
s Pongo_pygmaeus.ctg62                               19803239 3 +  19899266 tt---a
i Pongo_pygmaeus.ctg62                              C 0 C 0
s Presbytis_comata.k141_672698                           1389 3 -     15069 tt---c
i Presbytis_comata.k141_672698                      C 0 C 0
s Presbytis_mitrata.k141_860013                          1523 3 +     14865 tt---c
i Presbytis_mitrata.k141_860013                     C 0 C 0
s Prolemur_simus.MPIZ01000048.1                       6844734 3 +  12164890 TT---C
i Prolemur_simus.MPIZ01000048.1                     C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                664014 3 -   2312742 TT---C
i Propithecus_coquerelli.NW_012147997.1             C 0 C 0
s Propithecus_coronatus.k141_844990                     30766 3 +     30823 tt---c
i Propithecus_coronatus.k141_844990                 C 0 C 0
s Propithecus_diadema.k141_577245                       39203 3 +     52369 tt---c
i Propithecus_diadema.k141_577245                   C 0 C 0
s Propithecus_edwardsi.k141_1317105                     31592 3 -     44753 tt---c
i Propithecus_edwardsi.k141_1317105                 C 0 C 0
s Propithecus_perrieri.k141_7554                        13514 3 +     27322 tt---c
i Propithecus_perrieri.k141_7554                    C 0 C 0
s Propithecus_tattersalli.k141_907138                   13158 3 -     53241 tt---c
i Propithecus_tattersalli.k141_907138               C 0 C 0
s Propithecus_verreauxi.k141_158021                     35429 3 -     48185 tt---c
i Propithecus_verreauxi.k141_158021                 C 0 C 0
s Psammomys_obesus.NESX01026517.1                       28952 3 +     77221 tt---t
i Psammomys_obesus.NESX01026517.1                   C 0 C 0
s Pygathrix_cinerea.k141_374971                         25514 3 +     56732 tt---c
i Pygathrix_cinerea.k141_374971                     C 0 C 0
s Pygathrix_nigripes_b.ctg79                             6802004 3 +   6970761 tt---c
i Pygathrix_nigripes_b.ctg79                           C 0 C 0
s Pygathrix_nigripes_a.k141_101123                         1396 3 +     18040 tt---c
i Pygathrix_nigripes_a.k141_101123                    C 0 C 0
s Rattus_norvegicus.chr11                            13910896 3 +  90463843 TT---T
i Rattus_norvegicus.chr11                           C 0 C 0
s Rhinopithecus_bieti.k119_102124                       11951 3 -     14454 tt---c
i Rhinopithecus_bieti.k119_102124                   C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1               206373277 3 - 206558726 tt---c
i Rhinopithecus_roxellana.NC_044549.1               C 0 C 0
s Rhinopithecus_strykeri.ctg4                        44850925 3 -  45163003 tt---c
i Rhinopithecus_strykeri.ctg4                       C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                 15668718 3 -  43202129 TT---C
i Saimiri_boliviensis.NW_024100938.1                C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                     593 3 +     34089 tt---c
i Saimiri_cassiquiarensis.k141_808270               C 0 C 0
s Saimiri_macrodon.k141_2087127                           524 3 -     60842 tt---c
i Saimiri_macrodon.k141_2087127                     C 0 C 0
s Saimiri_oerstedii.k141_841116                           593 3 +     67014 tt---c
i Saimiri_oerstedii.k141_841116                     C 0 C 0
s Saimiri_sciureus.k141_1947592                           593 3 +     60816 tt---c
i Saimiri_sciureus.k141_1947592                     C 0 C 0
s Saimiri_ustus.k141_1282476                              521 3 -     76454 tt---c
i Saimiri_ustus.k141_1282476                        C 0 C 0
s Sapajus_apella.ctg10                               17337101 3 -  30362882 tt---c
i Sapajus_apella.ctg10                              C 0 C 0
s Sapajus_macrocephalus.k141_966464                     16702 3 -     62485 tt---c
i Sapajus_macrocephalus.k141_966464                 C 0 C 0
s Semnopithecus_entellus.k141_1527475                   23939 3 +     26421 tt---c
i Semnopithecus_entellus.k141_1527475               C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                   4401 3 +     20762 tt---c
i Semnopithecus_hypoleucos.k141_761524              C 0 C 0
s Semnopithecus_johnii.k141_1351450                     38134 3 +     40653 tt---c
i Semnopithecus_johnii.k141_1351450                 C 0 C 0
s Semnopithecus_priam.k141_198153                        8693 3 -     12194 tt---c
i Semnopithecus_priam.k141_198153                   C 0 C 0
s Semnopithecus_schistaceus.k141_653647                 22112 3 -     27512 tt---c
i Semnopithecus_schistaceus.k141_653647             C 0 C 0
s Semnopithecus_vetulus.k141_642050                     31133 3 -     33692 tt---c
i Semnopithecus_vetulus.k141_642050                 C 0 C 0
s Spermophilus_dauricus.KZ294190.1                    2236073 3 +   2842873 tt---t
i Spermophilus_dauricus.KZ294190.1                  C 0 C 0
s Symphalangus_syndactylus.tarseq_24                 13898063 3 +  13920577 tt---a
i Symphalangus_syndactylus.tarseq_24                C 0 C 0
s Tarsius_lariang.k141_609102                           22848 3 +     42269 ct---c
i Tarsius_lariang.k141_609102                       C 0 C 0
s Tarsius_wallacei.k141_48636                           56156 3 +     65473 ct---c
i Tarsius_wallacei.k141_48636                       C 0 C 0
s Theropithecus_gelada.CM009951.1                   194003433 3 - 194193292 TT---C
i Theropithecus_gelada.CM009951.1                   C 0 C 0
s Trachypithecus_auratus.k141_738098                    22511 3 +     38948 tt---c
i Trachypithecus_auratus.k141_738098                C 0 C 0
s Trachypithecus_crepusculus.k141_1588528               16238 3 -     32910 tt---c
i Trachypithecus_crepusculus.k141_1588528           C 0 C 0
s Trachypithecus_cristatus.k141_27198                   22136 3 +     24652 tt---c
i Trachypithecus_cristatus.k141_27198               C 0 C 0
s Trachypithecus_francoisi.k141_1178450                  1021 3 -      3559 tt---c
i Trachypithecus_francoisi.k141_1178450             C 0 C 0
s Trachypithecus_geei.k141_670367                       38960 3 -     54611 tt---c
i Trachypithecus_geei.k141_670367                   C 0 C 0
s Trachypithecus_germaini.k141_809503                   14959 3 +     17312 tt---c
i Trachypithecus_germaini.k141_809503               C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                22329 3 -     25040 tt---c
i Trachypithecus_hatinhensis.k141_357672            C 0 C 0
s Trachypithecus_laotum.k141_171445                       995 3 +      3528 tt---c
i Trachypithecus_laotum.k141_171445                 C 0 C 0
s Trachypithecus_leucocephalus.k141_283605              47357 3 +     51589 tt---c
i Trachypithecus_leucocephalus.k141_283605          C 0 C 0
s Trachypithecus_melamera.k141_238507                   10525 3 +     14732 tt---c
i Trachypithecus_melamera.k141_238507               C 0 C 0
s Trachypithecus_obscurus.k141_1115109                   1003 3 -     28054 tt---c
i Trachypithecus_obscurus.k141_1115109              C 0 C 0
s Trachypithecus_phayrei.ctg3                        44655798 3 -  44834318 tt---c
i Trachypithecus_phayrei.ctg3                       C 0 C 0
s Trachypithecus_pileatus.k141_469329                     808 3 +      3372 tt---c
i Trachypithecus_pileatus.k141_469329               C 0 C 0
s Tupaia_chinensis.KB320831.1                         2786908 3 -   3938065 GC---C
i Tupaia_chinensis.KB320831.1                       I 404 I 102
s Tupaia_tana.TupTan_flattened_line_6570078               219 3 +       222 GC---C
i Tupaia_tana.TupTan_flattened_line_6570078         N 0 N 0
s Varecia_rubra.k141_432109                              1680 3 -     20643 tt---c
i Varecia_rubra.k141_432109                         C 0 C 0
s Varecia_variegata.k141_775891                         21225 3 -     33872 tt---c
i Varecia_variegata.k141_775891                     C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                   123255 3 -    134049 ct---c
i Xerus_inauris.XerIna_scaffold_7898                C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                 12042 2 -     20485 T----C
i Zapus_hudsonius.ZapHud_scaffold_64392             C 0 C 0
e Hylobates_pileatus_b.LG03                                 92553610 0 - 189753342 C
e Sigmodon_hispidus.SigHis_scaffold_11332               94219 0 -    120886 C
e Otolemur_garnettii.GL873528.1                      18004869 68 -  38779656 I
e Otolemur_crassicaudatus.k141_321880                   35431 68 +     38679 I
e Galagoides_demidoff.k141_1769638                       6763 68 +     27357 I
e Galago_senegalensis.k141_964197                        9743 68 -     43889 I
e Galago_moholi.ctg555                                 207363 68 -    847004 I
e Nomascus_siki_b.tarseq_80                         20456 0 -  18771707 C
e Nomascus_annamensis.k141_745421                         374 0 -      4569 C
e Nomascus_gabriellae.k141_1350167                        785 0 +      9928 C

a score=0.000000
s hg38.chr4_GL000008v2_random                            8052 29 +    209709 a--t--tcta--catatct-------------gcaac-tttgcatcctt
s Acomys_cahirinus.AcoCah_scaffold_1625                108445 29 -    189883 G--T--CCTA--AGTATCT-------------GCCAA-TGTATGCTATT
i Acomys_cahirinus.AcoCah_scaffold_1625             C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                8736 26 -     22067 A--T--CTTA--CAT---T-------------GTCAA-CGTACATTATT
i Allactaga_bullata.AllBul_scaffold_70162           C 0 C 0
s Allenopithecus_nigroviridis.k141_3103707              59074 29 +     61638 a--t--ccta--tgtgtct-------------gcaac-ttttcatcctt
i Allenopithecus_nigroviridis.k141_3103707          C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                    50882 29 +     53391 a--t--ccta--tgtgtct-------------gcaac-ttttcatcctt
i Allochrocebus_lhoesti.k141_4825038                C 0 C 0
s Allochrocebus_preussi.k141_1202907                     1606 29 +     72529 a--t--ccta--tgtgtct-------------gcaac-ttttcatcctt
i Allochrocebus_preussi.k141_1202907                C 0 C 0
s Allochrocebus_solatus.k141_787528                      1183 29 +      3797 a--t--ccta--tgtgtct-------------gcaac-ttttcatcctt
i Allochrocebus_solatus.k141_787528                 C 0 C 0
s Alouatta_belzebul.k141_1818029                         6268 29 -     18050 a--t--tcta--catatct-------------gcaac-tttgcatcctt
i Alouatta_belzebul.k141_1818029                    C 0 C 0
s Alouatta_caraya.k141_5460                              7385 29 -     11521 a--t--tcta--catatct-------------gcaac-tttgcatcctt
i Alouatta_caraya.k141_5460                         C 0 C 0
s Alouatta_discolor.k141_811576                          6943 29 -     21359 a--t--tcta--catatct-------------gcaac-tttgcatcctt
i Alouatta_discolor.k141_811576                     C 0 C 0
s Alouatta_juara.k141_1856473                            5326 29 +      7227 g--t--tcta--catatct-------------gcaact-ttgcatcctt
i Alouatta_juara.k141_1856473                       C 0 C 0
s Alouatta_macconnelli.k141_1331706                      6241 29 -     10438 a--t--tcta--catatct-------------gcaac-tttgcatcctt
i Alouatta_macconnelli.k141_1331706                 C 0 C 0
s Alouatta_nigerrima.k141_2718643                        2895 29 +      7047 a--t--tcta--catatct-------------gcaac-tttgcatcctt
i Alouatta_nigerrima.k141_2718643                   C 0 C 0
s Alouatta_palliata.k141_1316127                         6179 29 +     10410 a--t--tcta--catatct-------------gcaac-tttgcatcctt
i Alouatta_palliata.k141_1316127                    C 0 C 0
s Alouatta_puruensis.k141_390786                         7456 29 -      7615 a--t--tcta--catatct-------------gcaact-ttgcatcctt
i Alouatta_puruensis.k141_390786                    C 0 C 0
s Alouatta_seniculus.k141_990213                         2900 29 +      6429 a--t--tcta--cgtatct-------------gcaact-ttgcatcctt
i Alouatta_seniculus.k141_990213                    C 0 C 0
s Aotus_azarae.k141_3170768                             58583 29 +     78111 a--t--tcta--cgtatct-------------gcaac-tttgcatcctt
i Aotus_azarae.k141_3170768                         C 0 C 0
s Aotus_griseimembra.k141_3275623                        1514 29 +     22701 a--t--tcta--cgtatct-------------gcaac-tttgcatcctt
i Aotus_griseimembra.k141_3275623                   C 0 C 0
s Aotus_nancymaae.KZ196176.1                          5745474 29 +   9889416 a--t--tcta--cgtatct-------------gcaac-tttgcaTcctt
i Aotus_nancymaae.KZ196176.1                        C 0 C 0
s Aotus_trivirgatus.k141_1740727                         2066 29 -    104377 a--t--tcta--cgtatct-------------gcaac-tttgcatcctt
i Aotus_trivirgatus.k141_1740727                    C 0 C 0
s Aotus_vociferans.k141_718647                           2066 29 +     23246 a--t--tcta--cgtatct-------------gcaac-tttgcatcctt
i Aotus_vociferans.k141_718647                      C 0 C 0
s Arctocebus_calabarensis.k141_1161114                  14369 31 +     17483 ctct--ccca--catatct-------------gcaac-attgtatctct
i Arctocebus_calabarensis.k141_1161114              C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                         9535327 29 +  39197703 a--t--tcta--catatct-------------gcaac-tttgcatcctt
i Ateles_geoffroyi_b.tarseq_2582                       C 0 C 0
s Ateles_belzebuth.k141_1348307                         56615 29 +     85812 a--t--tcta--catatct-------------gcaac-tttgcatcctt
i Ateles_belzebuth.k141_1348307                     C 0 C 0
s Ateles_chamek.k141_1072810                             7612 29 +     89302 a--t--tcta--catatct-------------gcaac-tttgcatcctt
i Ateles_chamek.k141_1072810                        C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                         12121 29 -     58268 a--t--tcta--catatct-------------gcaac-tttgcatcctt
i Ateles_geoffroyi_a.k141_1300742                     C 0 C 0
s Ateles_marginatus.k141_899112                         60109 29 +    119057 a--t--tcta--catatct-------------gcaac-tttgcatcctt
i Ateles_marginatus.k141_899112                     C 0 C 0
s Ateles_paniscus.k141_1631200                           2060 29 -     25888 a--t--tcta--catatct-------------gcaac-tttgcatcctt
i Ateles_paniscus.k141_1631200                      C 0 C 0
s Avahi_laniger.k141_2840928                             2926 29 -     16375 a--t--ccta--cacatct-------------gcaac-tttgtatcctt
i Avahi_laniger.k141_2840928                        C 0 C 0
s Avahi_peyrierasi.k141_767228                           8899 29 -      9688 a--t--ccta--cacatct-------------gcaac-tttgtatcctt
i Avahi_peyrierasi.k141_767228                      C 0 C 0
s Cacajao_ayresi.k141_724503                           109984 29 -    171031 a--t--tcta--catatct-------------gcaac-tttgcgtcctt
i Cacajao_ayresi.k141_724503                        C 0 C 0
s Cacajao_calvus.k141_96166                              9010 29 +    125063 a--t--tcta--catatct-------------gcaac-tttgcgtcctt
i Cacajao_calvus.k141_96166                         C 0 C 0
s Cacajao_hosomi.k141_303789                            11058 29 -    216513 a--t--tcta--catatct-------------gcaac-tttgcgtcctt
i Cacajao_hosomi.k141_303789                        C 0 C 0
s Cacajao_melanocephalus.k141_1160263                    3597 29 -    134917 a--t--tcta--catatct-------------gcaac-tttgcgtcctt
i Cacajao_melanocephalus.k141_1160263               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_647363               349 11 +      1887 a--t--cttA--CAAAT--------------------------------
i Capromys_pilorides.CapPil_scaffold_647363         C 0 I 284
s Carlito_syrichta.NW_007248099.1                      305366 29 +    345090 A--G--CCTA--CATACAT-------------GCAAC-TTTGTTTCCTT
i Carlito_syrichta.NW_007248099.1                   C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037               26914 29 +     33760 c--t--ccta--cgtatct-------------gccac-tttgcatcttt
i Castor_canadensis.CasCan_scaffold_47037           C 0 C 0
s Cavia_aperea.AVPZ01000278.1                        15783648 11 -  24422027 a--t--ctta--catat--------------------------------
i Cavia_aperea.AVPZ01000278.1                       C 0 I 115
s Cavia_porcellus.DS562889.1                         15795582 11 -  24440124 a--t--ctta--catat--------------------------------
i Cavia_porcellus.DS562889.1                        C 0 I 115
s Cavia_tschudii.CavTsc_scaffold_488                   173773 11 +    436027 a--t--ctta--catat--------------------------------
i Cavia_tschudii.CavTsc_scaffold_488                C 0 I 115
s Cebus_albifrons.Contig22                           18886795 29 -  29618158 a--t--tcta--catatct-------------gcaac-tttgcatcctt
i Cebus_albifrons.Contig22                          C 0 C 0
s Cebus_olivaceus.k141_93739                             4341 29 -     26817 a--t--tcta--catatct-------------gcaac-tttgcatcctt
i Cebus_olivaceus.k141_93739                        C 0 C 0
s Cebus_unicolor.k141_239009                             8581 29 +     25043 a--t--tcta--catatct-------------gcaac-tttgcatcctt
i Cebus_unicolor.k141_239009                        C 0 C 0
s Cephalopachus_bancanus.k141_702587                     4402 29 +     21754 a--g--ccta--catacct-------------gcaac-tttgtttcctt
i Cephalopachus_bancanus.k141_702587                C 0 C 0
s Cercocebus_atys.KQ010443.1                          6550870 29 +   6739814 A--T--CCTA--CGTGTCT-------------GCAAC-TTTGCATCCTT
i Cercocebus_atys.KQ010443.1                        C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                  52347 29 -     54931 a--t--ccta--cgtgtct-------------gcaac-tttgcatcctt
i Cercocebus_chrysogaster.k141_2951608              C 0 C 0
s Cercocebus_lunulatus.k141_3387186                     17331 29 -     19697 a--t--ccta--cgtgtct-------------gcaac-tttgcatcctt
i Cercocebus_lunulatus.k141_3387186                 C 0 C 0
s Cercocebus_torquatus.k141_3969582                     54862 29 -    107033 a--t--ccta--cgcgtct-------------gcaac-tttgcatcctt
i Cercocebus_torquatus.k141_3969582                 C 0 C 0
s Cercopithecus_ascanius.k141_3371259                    1305 29 -      3853 a--t--ccta--tgtgtct-------------gcaac-ttttcatcctt
i Cercopithecus_ascanius.k141_3371259               C 0 C 0
s Cercopithecus_cephus.k141_598190                      25237 29 +     30494 a--t--ccta--tgtgtct-------------gcaac-ttttcatcctt
i Cercopithecus_cephus.k141_598190                  C 0 C 0
s Cercopithecus_diana.k141_1490386                       1260 29 -      4022 a--t--ccta--tgtgtct-------------gcaac-ttttcatcctt
i Cercopithecus_diana.k141_1490386                  C 0 C 0
s Cercopithecus_hamlyni.k141_381099                      1150 29 -      3505 a--t--ccta--tgtgtct-------------gcaac-ttttcatcctt
i Cercopithecus_hamlyni.k141_381099                 C 0 C 0
s Cercopithecus_lowei.k141_623764                       19961 29 +     35983 a--t--ccta--tgtgtct-------------gcaac-ttttcatcctt
i Cercopithecus_lowei.k141_623764                   C 0 C 0
s Cercopithecus_albogularis.ctg51                          11985737 29 +  12117833 a--t--ccta--cgtgtct-------------gtaac-ttttcatcctt
i Cercopithecus_albogularis.ctg51                         C 0 C 0
s Cercopithecus_mona.ctg12                           46473233 29 +  46592721 a--t--ccta--tgtgtct-------------gcaac-ttttcatcctt
i Cercopithecus_mona.ctg12                          C 0 C 0
s Cercopithecus_neglectus.k141_1474992                  31060 29 +     33420 a--t--ccta--tgtgtct-------------gcaac-ttttcatcctt
i Cercopithecus_neglectus.k141_1474992              C 0 C 0
s Cercopithecus_nictitans.k141_675209                    1096 29 -      3443 a--t--ccta--cgtgtct-------------gcaac-ttttcatcctt
i Cercopithecus_nictitans.k141_675209               C 0 C 0
s Cercopithecus_petaurista.k141_2037881                  2087 29 -      4669 a--t--ccta--tgtgtct-------------gcaac-ttttcatcctt
i Cercopithecus_petaurista.k141_2037881             C 0 C 0
s Cercopithecus_pogonias.k141_1977419                    1891 29 -      4411 a--t--ccta--tgtgtct-------------gcaac-ttttcatcctt
i Cercopithecus_pogonias.k141_1977419               C 0 C 0
s Cercopithecus_roloway.k141_3372345                     1411 29 -      4205 a--t--ccta--tgtgtct-------------gcaac-ttttcatcctt
i Cercopithecus_roloway.k141_3372345                C 0 C 0
s Cheirogaleus_major.k141_1157592                       55262 29 -     68416 a--t--ccta--cacatct-------------acaac-tttgtatcctt
i Cheirogaleus_major.k141_1157592                   C 0 C 0
s Cheirogaleus_medius.k141_133808                        4312 29 +     13308 a--t--ccta--cacatct-------------acaac-tttgtatcctt
i Cheirogaleus_medius.k141_133808                   C 0 C 0
s Cheracebus_lucifer.k141_619653                         1594 29 -     18223 a--t--tcta--catatct-------------gcaac-tttgcatcctt
i Cheracebus_lucifer.k141_619653                    C 0 C 0
s Cheracebus_lugens.k141_203936                         18617 29 +     25473 a--t--tcta--catatct-------------gcaac-tttgcatcctt
i Cheracebus_lugens.k141_203936                     C 0 C 0
s Cheracebus_regulus.k141_2128895                       37656 29 +     57117 a--t--tcta--catatct-------------gcaac-tttgcatcctt
i Cheracebus_regulus.k141_2128895                   C 0 C 0
s Cheracebus_torquatus.k141_315545                      42331 29 +     54541 a--t--tcta--catatct-------------gcaac-tttgcatcctt
i Cheracebus_torquatus.k141_315545                  C 0 C 0
s Chinchilla_lanigera.JH721867.1                     15957775 11 +  43084221 a--t--ctta--cattt--------------------------------
i Chinchilla_lanigera.JH721867.1                    C 0 I 14
s Chiropotes_israelita.k141_1189915                     67205 29 +    196370 a--t--tcta--catatct-------------gcaac-tttgcgtcctt
i Chiropotes_israelita.k141_1189915                 C 0 C 0
s Chiropotes_sagulatus.k141_773804                      11379 29 +     40510 a--t--tcta--catatct-------------gcaac-tttgcgtcctt
i Chiropotes_sagulatus.k141_773804                  C 0 C 0
s Chlorocebus_aethiops.ctg22                         15134691 29 -  15256731 a--t--ccta--tgtgtct-------------gcaac-ttttcatcctt
i Chlorocebus_aethiops.ctg22                        C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                  29737 29 -     53260 a--t--ccta--tgtgtct-------------gcaac-ttttcatcctt
i Chlorocebus_pygerythrus.k141_1486215              C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                    101140185 29 + 101219884 A--T--CCTA--TGTGTCT-------------GCAAC-TTTTCATCCTT
i Chlorocebus_sabaeus.CM001963.2                    C 0 C 0
s Colobus_angolensis.KN985967.1                      10878767 29 +  10971483 a--t--cctg--cgtgtct-------------gcaac-tttgcatcctt
i Colobus_angolensis.KN985967.1                     C 0 C 0
s Colobus_guereza.LG08                              147659926 29 + 156195979 a--t--cctg--cgtgtct-------------gcaac-tttgcatcctt
i Colobus_guereza.LG08                              C 0 C 0
s Colobus_polykomos.k141_1406057                        11911 29 +     23629 a--t--cctg--cgtgtct-------------gcaac-tttgcatcctt
i Colobus_polykomos.k141_1406057                    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949             273882 29 -    399297 g--t--cata--agtacct-------------gccaa-tatatgttatt
i Cricetomys_gambianus.CriGam_scaffold_949          C 0 C 0
s Cricetulus_griseus.LT883672.1                      53025359 27 +  72327488 G--T--C--A--GGTATCT-------------GCCAT-TGCATGTCATT
i Cricetulus_griseus.LT883672.1                     C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447              204595 29 -    956709 A--T--CTCG--CGTGTCA-------------GCCAT-ATTGTTTCCTT
i Ctenodactylus_gundi.CteGun_scaffold_447           C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489             26507  6 -     67205 ---------a--caAAT--------------------------------
i Ctenomys_sociabilis.CteSoc_scaffold_19489         C 0 I 292
s Cuniculus_paca.CunPac_flattened_line_16637            14527 11 +     26546 a--t--ctta--catac--------------------------------
i Cuniculus_paca.CunPac_flattened_line_16637        C 0 I 33
s Dasyprocta_punctata.DasPun_flattened_line_634         56000 11 -    236241 a--t--ctta--catat--------------------------------
i Dasyprocta_punctata.DasPun_flattened_line_634     C 0 I 33
s Daubentonia_madagascariensis.ctg11                 16841128 29 +  31942871 a--t--cgta--cacatct-------------gcaac-tttgtattctt
i Daubentonia_madagascariensis.ctg11                C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102            33160 11 -     73477 a--t--ctta--cttat--------------------------------
i Dolichotis_patagonum.DolPat_scaffold_14102        C 0 I 115
s Ellobius_lutescens.LOEQ01003611.1                    235545 29 -    369425 G--TCTC--A--AGTGTCT-------------GTCAA-Tgcatgtcatt
i Ellobius_lutescens.LOEQ01003611.1                 C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                       2554 29 -      7838 G--TCTC--A--AGTGTCT-------------GTCAA-TGCatgtcatt
i Ellobius_talpinus.LOJH01090055.1                  C 0 C 0
s Erythrocebus_patas.Contig8                         48766870 29 -  48907691 a--t--ccta--tgtgtct-------------gcaac-ttttcatcctt
i Erythrocebus_patas.Contig8                        C 0 C 0
s Eulemur_albifrons.k141_715837                          1336 29 +     13586 a--t--ccta--cacatct-------------gcaac-tttgtatcctt
i Eulemur_albifrons.k141_715837                     C 0 C 0
s Eulemur_collaris.k141_311830                           1273 29 -      6809 a--t--ccta--cacatct-------------gcaac-tttgtatcctt
i Eulemur_collaris.k141_311830                      C 0 C 0
s Eulemur_coronatus.k141_3240342                         7743 29 +     36558 a--t--ccta--cacatct-------------gcaac-tttgtatcctt
i Eulemur_coronatus.k141_3240342                    C 0 C 0
s Eulemur_flavifrons.k141_903901                         4060 29 +     60246 a--t--ccta--cacatct-------------gcaac-tttgtatcctt
i Eulemur_flavifrons.k141_903901                    C 0 C 0
s Eulemur_fulvus.k141_653297                             7548 29 +    109717 a--t--ccta--cacatct-------------gcaac-tttgtatcctt
i Eulemur_fulvus.k141_653297                        C 0 C 0
s Eulemur_macaco.k141_1341545                           11922 29 +     16540 a--t--ccta--cacatct-------------gcaac-tttgtatcctt
i Eulemur_macaco.k141_1341545                       C 0 C 0
s Eulemur_mongoz.k141_825972                            12199 29 +     27497 a--t--ccta--cacatct-------------gcaac-tttgtatcctt
i Eulemur_mongoz.k141_825972                        C 0 C 0
s Eulemur_rubriventer.k141_411740                       14655 29 +     26808 a--t--ccta--cacatct-------------gcaac-tttgtatcctt
i Eulemur_rubriventer.k141_411740                   C 0 C 0
s Eulemur_rufus.k141_1620292                            29389 29 +     46535 a--t--ccta--cacatct-------------gcaac-tttgtatcctt
i Eulemur_rufus.k141_1620292                        C 0 C 0
s Eulemur_sanfordi.k141_186399                          12112 29 -     29447 a--t--ccta--cacatct-------------gcaac-tttgtatcctt
i Eulemur_sanfordi.k141_186399                      C 0 C 0
s Fukomys_damarensis.KN123630.1                      13889333  7 -  19261668 a--t--c------ttag--------------------------------
i Fukomys_damarensis.KN123630.1                     C 0 I 27
s Galeopterus_variegatus.GalVar_scaffold_354           152590 29 +    324696 a--t--tcaa--catatct-------------gcatc-tttgtaccctt
i Galeopterus_variegatus.GalVar_scaffold_354        C 0 C 0
s Glis_glis.GliGli_scaffold_79770                        9025 21 -     18683 --------------aaTCT-------------TTCAG-tttatatcctt
i Glis_glis.GliGli_scaffold_79770                   N 0 C 0
s Gorilla_beringei.k141_111300                           1444 29 -     14630 a--t--tcta--catatct-------------gcaac-tttgcatcctt
i Gorilla_beringei.k141_111300                      C 0 C 0
s Gorilla_gorilla.LT578340.1                        119648542 29 - 195582420 a--t--tcta--catatct-------------gcaac-tttgcatcctt
i Gorilla_gorilla.LT578340.1                        C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493               73574 29 +    118900 A--T--CTTA--CATATCT-------------TTCAG-TTTATATTCTT
i Graphiurus_murinus.GraMur_scaffold_4493           C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                     1881 29 +      3980 a--t--ccta--cacatct-------------gcaac-tttgtatcctt
i Hapalemur_alaotrensis.k141_1198205                C 0 C 0
s Hapalemur_gilberti.k141_97962                         24361 29 +     26611 a--t--ccta--cacatct-------------gcaac-tttgtatcctt
i Hapalemur_gilberti.k141_97962                     C 0 C 0
s Hapalemur_griseus.k141_1387522                         1815 29 +     56096 a--t--ccta--cacatct-------------gcaac-tttgtatcctt
i Hapalemur_griseus.k141_1387522                    C 0 C 0
s Hapalemur_meridionalis.k141_186231                    25088 29 -     42470 a--t--ccta--cacatct-------------gcaac-tttgtatcctt
i Hapalemur_meridionalis.k141_186231                C 0 C 0
s Hapalemur_occidentalis.k141_797938                    41686 28 -     54384 a--t--ccta--cacatct-------------acaac-tt-gtatcctt
i Hapalemur_occidentalis.k141_797938                C 0 C 0
s Heterocephalus_glaber.JH602058.1                    2547321  7 +  31725842 a--t--c------ttag--------------------------------
i Heterocephalus_glaber.JH602058.1                  C 0 I 30
s Hoolock_leuconedys.ctg649                                98116 29 +    115816 a--t--tcta--catatct-------------gcaac-tttgcatcctc
i Hoolock_leuconedys.ctg649                            C 0 C 0
s Hylobates_abbotti.k141_493872                          1253 29 +      5897 a--t--tcta--catatct-------------gcaac-tttgcatcctc
i Hylobates_abbotti.k141_493872                     C 0 C 0
s Hylobates_agilis.k141_282275                            466 29 +      1846 a--t--tcta--catatct-------------gcaac-tttgcatcctc
i Hylobates_agilis.k141_282275                      C 0 C 0
s Hylobates_klossii.k141_466549                          7711 29 +     11537 a--t--tcta--catatct-------------gcaac-tttgcatcctc
i Hylobates_klossii.k141_466549                     C 0 C 0
s Hylobates_muelleri.k141_1133650                         688 29 -      2775 a--t--tcta--catatct-------------gcaac-tttgcatcctc
i Hylobates_muelleri.k141_1133650                   C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                 2327 31 +     22540 -----------------TCgcagtgctggggatcaaa-ctcagggcttc
i Hystrix_cristata.HysCri_scaffold_50788            I 13 I 105
s Ictidomys_tridecemlineatus.JH393315.1               7122150 29 +  13083262 a--t--cttg--tacatct-------------accac-tttgtatccat
i Ictidomys_tridecemlineatus.JH393315.1             C 0 C 0
s Indri_indri.k141_3334527                               8324 29 +      9207 a--t--ccta--cacatct-------------gcaac-tttgtattctt
i Indri_indri.k141_3334527                          C 0 C 0
s Jaculus_jaculus.JH725517.1                          8561697 26 +  11848649 A--T--CTTA--CAT---T-------------GTCAA-TGTGcatcatt
i Jaculus_jaculus.JH725517.1                        C 0 C 0
s Lagothrix_lagothricha.k141_12968                      46170 29 -    147782 a--t--tcta--catatct-------------gcaac-tttgcatcctt
i Lagothrix_lagothricha.k141_12968                  C 0 C 0
s Lemur_catta.scaffold_1                            258403364 29 - 285822530 a--t--ccta--cacatct-------------acaac-tttgtatcctt
i Lemur_catta.scaffold_1                            C 0 C 0
s Lepilemur_ankaranensis.k141_884009                    20257 29 +     39228 a--t--ctta--cacatct-------------gcaac-tttgtatcctt
i Lepilemur_ankaranensis.k141_884009                C 0 C 0
s Lepilemur_dorsalis.k141_134267                        49633 29 +     63517 a--t--ccta--cacatct-------------gcaac-tttgtatcctt
i Lepilemur_dorsalis.k141_134267                    C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                    74853 29 +    116806 a--t--ccta--cacatct-------------gcaac-tttgtatcctt
i Lepilemur_ruficaudatus.k141_617879                C 0 C 0
s Lepilemur_septentrionalis.k141_578524                 27893 29 -     33031 a--t--ctta--cacatcc-------------gcaac-tttgtatcctt
i Lepilemur_septentrionalis.k141_578524             C 0 C 0
s Lophocebus_aterrimus.ctg55                         19243956 29 +  19376315 a--t--ccta--cgtgtct-------------gcaac-tttgcatcctt
i Lophocebus_aterrimus.ctg55                        C 0 C 0
s Loris_lydekkerianus.k141_550999                        6866 29 +     84689 a--t--ccca--catatct-------------gccac-atggtttctct
i Loris_lydekkerianus.k141_550999                   C 0 C 0
s Loris_tardigradus.ctg97                             3774625 29 +   6799190 a--t--ccca--catatct-------------gccac-atggtttctct
i Loris_tardigradus.ctg97                           C 0 C 0
s Macaca_arctoides.k141_2201161                         15642 29 +     74745 a--t--ccta--cgtgtct-------------gcaac-tttgcatcctt
i Macaca_arctoides.k141_2201161                     C 0 C 0
s Macaca_assamensis.Contig65                         12702148 29 +  12821369 a--t--ccta--cgtgtct-------------gcaac-tttgcatcctt
i Macaca_assamensis.Contig65                        C 0 C 0
s Macaca_cyclopis.k119_1168412                           4241 29 +      6569 a--t--ccta--cgtgtct-------------gcaac-tttgcatcctt
i Macaca_cyclopis.k119_1168412                      C 0 C 0
s Macaca_fascicularis.k141_155037                       42541 29 +     63263 a--t--ccta--cgtgtct-------------gcaac-tttgcatcctt
i Macaca_fascicularis.k141_155037                   C 0 C 0
s Macaca_fuscata.k119_1068107                           11118 29 +     12679 a--t--ccta--cgtgtct-------------gcaac-tttgcatcctt
i Macaca_fuscata.k119_1068107                       C 0 C 0
s Macaca_leonina.k141_3421209                             691 29 +      3017 a--t--ccta--cgtgtct-------------gcaac-tttgcatcctt
i Macaca_leonina.k141_3421209                       C 0 C 0
s Macaca_maura.k141_251854                              42303 29 -     79256 a--t--ccta--cgtgtct-------------gcaac-tttgcatcctt
i Macaca_maura.k141_251854                          C 0 C 0
s Macaca_mulatta.NC_041755.1                        196031223 29 + 196197964 A--T--CCTA--CGTGTCT-------------GCAAC-TTTGCATCCTT
i Macaca_mulatta.NC_041755.1                        C 0 C 0
s Macaca_nemestrina.KQ004885.1                       11441327 29 +  11645122 A--T--CCTA--CGTGTCT-------------GCAAC-TTTGCATCCTT
i Macaca_nemestrina.KQ004885.1                      C 0 C 0
s Macaca_nigra.k141_282495                               1253 29 -     46448 a--t--ccta--cgtgtct-------------gcaac-tttgcatcctt
i Macaca_nigra.k141_282495                          C 0 C 0
s Macaca_radiata.k141_1580474                            1080 29 -      3617 a--t--ccta--cgtgtct-------------gcaac-tttgcatcctt
i Macaca_radiata.k141_1580474                       C 0 C 0
s Macaca_siberu.k141_741907                             11413 29 -     55006 a--t--ccta--cgtgtct-------------gcaac-tttgcatcctt
i Macaca_siberu.k141_741907                         C 0 C 0
s Macaca_silenus.Contig12                            43836452 29 +  43892939 a--t--ccta--cgtgtct-------------gcaac-tttgcatcctt
i Macaca_silenus.Contig12                           C 0 C 0
s Macaca_thibetana.k99_116940                            3675 29 -      5978 a--t--ccta--cgtgtct-------------gcaac-tttgcatcctt
i Macaca_thibetana.k99_116940                       C 0 C 0
s Macaca_tonkeana.k141_2870633                           1255 29 -     27140 a--t--ccta--cgtgtct-------------gcaac-tttgcatcctt
i Macaca_tonkeana.k141_2870633                      C 0 C 0
s Mandrillus_leucophaeus.scaffold125                 43433116 29 -  43563597 a--t--ccta--cgtgtct-------------gcaac-tttgcatcctt
i Mandrillus_leucophaeus.scaffold125                C 0 C 0
s Mandrillus_sphinx.Contig144                         4445942 29 -   4543643 a--t--ccta--cgtgtct-------------gcaac-tttgcatcctt
i Mandrillus_sphinx.Contig144                       C 0 C 0
s Marmota_marmota.CZRN01000005.1                     36869994 29 +  64221397 a--t--cttg--tacatct-------------accac-tttgtatccat
i Marmota_marmota.CZRN01000005.1                    C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233            7894 29 +     15977 a--t--ccta--agtatct-------------gccaa-tgtatgccatt
i Meriones_unguiculatus.MerUng_scaffold_52233       C 0 C 0
s Mesocricetus_auratus.KB708139.1                     1042841 27 -  26018355 g--t--c--a--agtatct-------------gtcat-tgtatgacatt
i Mesocricetus_auratus.KB708139.1                   C 0 C 0
s Microcebus_murinus.CM007691.1                      16506479 29 +  47401472 A--T--CCTA--CACATCT-------------Gcaac-tttgtatcctt
i Microcebus_murinus.CM007691.1                     C 0 C 0
s Microtus_ochrogaster.CM001673.1                    22815205 29 -  98408828 G--TCTC--A--CATGTCT-------------GTCAA-Tgcatggcatt
i Microtus_ochrogaster.CM001673.1                   C 0 C 0
s Miopithecus_ogouensis.k141_2666161                    31790 29 +     34273 a--t--ccta--tgtgtct-------------gcaac-ttttcatcctc
i Miopithecus_ogouensis.k141_2666161                C 0 C 0
s Mirza_zaza.k141_226143                                 1891 29 +      8497 a--t--ccta--cacatct-------------gcaac-tttgtatcctt
i Mirza_zaza.k141_226143                            C 0 C 0
s Mus_caroli.LT608236.1                              70761362 29 +  92629107 G--T--TTTA--AGTATGT-------------GACAA-TGTACACCACT
i Mus_caroli.LT608236.1                             C 0 I 21
s Mus_musculus.chr16                                 75484437 29 +  98207768 G--T--TTTA--AGTATGT-------------GCCAA-TGTGCACCACT
i Mus_musculus.chr16                                C 0 I 21
s Mus_pahari.LT608305.1                              67548977 28 +  89017189 G--T--TTTA---ATATAT-------------GCCAA-TGCATGCTATT
i Mus_pahari.LT608305.1                             C 0 I 21
s Mus_spretus.CM004110.1                             74324075 29 +  97876770 G--T--TTTA--AGTATGT-------------GCCAA-TGTGCACCACT
i Mus_spretus.CM004110.1                            C 0 I 21
s Muscardinus_avellanarius.MusAve_scaffold_9643          6891 29 +     98495 a--c--ctta--tgcatca-------------ttcac-tttatatcctt
i Muscardinus_avellanarius.MusAve_scaffold_9643     C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                 86100 11 -    117718 a--t--ccta--caaat--------------------------------
i Myocastor_coypus.MyoCoy_scaffold_3653             C 0 I 285
s Nannospalax_galili.KL201303.1                        107163 29 +    362372 t--t--ctta--cccatct-------------gacat-tgtatatcatt
i Nannospalax_galili.KL201303.1                     C 0 C 0
s Nasalis_larvatus.k141_153429                           4155 29 +     48152 a--t--ccta--cgtgtct-------------gcaac-tttgcatcctt
i Nasalis_larvatus.k141_153429                      C 0 C 0
s Nycticebus_bengalensis.LG16                        65563214 29 -  95554990 a--t--tcca--catatct-------------gccac-attgtttctct
i Nycticebus_bengalensis.LG16                       C 0 C 0
s Nycticebus_coucang.k141_7268257                        2229 29 -      2537 a--t--tcca--catatct-------------gccac-attgtttctct
i Nycticebus_coucang.k141_7268257                   I 6 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17  65665577 29 +  89412551 a--t--tcca--catatct-------------gccac-attgtttctct
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17 C 0 C 0
s Octodon_degus.JH651621.1                            3674632 11 +  10294119 t--t--ctaa--caaat--------------------------------
i Octodon_degus.JH651621.1                          C 0 I 291
s Ondatra_zibethicus.OndZib_scaffold_6821              121023 29 +    145789 A--TCTC--A--AGTGTCT-------------GTCAA-TGCATGTCATT
i Ondatra_zibethicus.OndZib_scaffold_6821           C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578              32967 26 +     62360 A--T--C--T--TGTGTCT-------------TTCAA-CACATC-CATT
i Onychomys_torridus.OnyTor_scaffold_12578          C 0 C 0
s Pan_paniscus.CM003386.1                           127570786 29 - 205426864 A--T--TCTA--CATATTT-------------GCAAC-TTTGCATCCTT
i Pan_paniscus.CM003386.1                           C 0 C 0
s Pan_troglodytes.NBAG03003562.1                         9255 29 +     18198 A--T--TCTA--CATATCT-------------GCAAC-TTTGCATCCTT
i Pan_troglodytes.NBAG03003562.1                    I 447 I 249
s Papio_anubis.CM001492.2                           188151901 29 - 188283584 A--T--CCTA--CGTGTCT-------------GCAAC-TTTGCATCCTT
i Papio_anubis.CM001492.2                           C 0 C 0
s Papio_cynocephalus.k141_386926                        48113 29 +     76494 a--t--ccta--cgtgtct-------------gcaac-tttgcatcctt
i Papio_cynocephalus.k141_386926                    C 0 C 0
s Papio_hamadryas.Contig15                           47509297 29 +  47705337 a--t--ccta--cgtgtct-------------gcaac-tttgcatcctt
i Papio_hamadryas.Contig15                          C 0 C 0
s Papio_kindae.k141_5458022                             63280 29 -    104429 a--t--ccta--cgtgtct-------------gcaac-tttgcatcctt
i Papio_kindae.k141_5458022                         C 0 C 0
s Papio_papio.k141_3561084                              13064 29 -     29451 a--t--ccta--cgtgtct-------------gcaac-tttgcatcctt
i Papio_papio.k141_3561084                          C 0 C 0
s Papio_ursinus.k141_3762866                            33469 29 +     35859 a--t--ccta--cgtgtct-------------gcaac-tttgcatcctt
i Papio_ursinus.k141_3762866                        C 0 C 0
s Perodicticus_ibeanus.k141_117958                       1217 31 -     23713 atct--ccca--catatct-------------gcaac-attgtatctct
i Perodicticus_ibeanus.k141_117958                  C 0 C 0
s Perodicticus_potto.k141_713187                        20514 31 -     27972 atct--ccca--catatct-------------gcaac-attgtatctct
i Perodicticus_potto.k141_713187                    C 0 C 0
s Peromyscus_maniculatus.KI615518.1                   4946126 29 -   8017169 A--T--C--TTAAGTACCT-------------GCCAA-TGCATCTCATC
i Peromyscus_maniculatus.KI615518.1                 C 0 C 0
s Piliocolobus_badius.k141_1497351                       1156 29 -      3310 a--t--ccta--tgtgtct-------------gcaac-tttgcatcctt
i Piliocolobus_badius.k141_1497351                  C 0 C 0
s Piliocolobus_gordonorum.k141_902470                   21062 29 -     82327 a--t--ccta--cgtgtct-------------gcaac-tttgcatcctt
i Piliocolobus_gordonorum.k141_902470               C 0 C 0
s Piliocolobus_kirkii.k141_557609                       17813 29 +     19957 a--t--ccta--cgtgtct-------------gcaac-tttgcatcctt
i Piliocolobus_kirkii.k141_557609                   C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1           26735822 29 +  26888534 a--t--ccta--tgtgtct-------------gcaac-tttgcatcctt
i Piliocolobus_tephrosceles.PDMG02000036.1          C 0 C 0
s Pithecia_albicans.k141_991845                         39697 29 -     61926 a--t--tcta--catatct-------------gcaac-tttgcgtcctt
i Pithecia_albicans.k141_991845                     C 0 C 0
s Pithecia_chrysocephala.k141_159118                    21126 29 +     78826 a--t--tcta--catatct-------------gcaac-tttgcgtcctt
i Pithecia_chrysocephala.k141_159118                C 0 C 0
s Pithecia_hirsuta.k141_1152968                          5077 29 -     15800 a--t--tcta--catatct-------------gcaac-tttgcgtcctt
i Pithecia_hirsuta.k141_1152968                     C 0 C 0
s Pithecia_mittermeieri.k141_2119203                     8275 29 -     16101 a--t--tcta--catatct-------------gcaac-tttgcgtcctt
i Pithecia_mittermeieri.k141_2119203                C 0 C 0
s Pithecia_pissinattii.k141_1102319                      1584 29 +      9673 a--t--tcta--catatct-------------gcaac-tttgcgtcctt
i Pithecia_pissinattii.k141_1102319                 C 0 C 0
s Pithecia_pithecia.tarseq_313                       13470578 29 -  19735023 a--t--tcta--catatct-------------gcaac-tttgcgtcctt
i Pithecia_pithecia.tarseq_313                      C 0 C 0
s Pithecia_vanzolinii.k141_831006                        9486 29 -     31692 a--t--tcta--catatct-------------gcaac-tttgcgtcctt
i Pithecia_vanzolinii.k141_831006                   C 0 C 0
s Plecturocebus_bernhardi.k141_959214                   18850 29 +     44506 a--t--tcta--catatct-------------gcaac-tttgcatcctt
i Plecturocebus_bernhardi.k141_959214               C 0 C 0
s Plecturocebus_brunneus.k141_498086                    19068 29 +     67491 a--t--tcta--catatct-------------gcaac-tttgcatcctt
i Plecturocebus_brunneus.k141_498086                C 0 C 0
s Plecturocebus_caligatus.k141_2539816                   9313 29 -     98129 a--t--tcta--catatct-------------gcaac-tttgcatcctt
i Plecturocebus_caligatus.k141_2539816              C 0 C 0
s Plecturocebus_cinerascens.k141_744510                 18913 29 +    147771 a--t--tcta--catatct-------------gcaac-tttgcatcctt
i Plecturocebus_cinerascens.k141_744510             C 0 C 0
s Plecturocebus_cupreus.k141_1223294                    19164 29 -     23762 a--t--tcta--catatct-------------gcaac-tttgcatcctt
i Plecturocebus_cupreus.k141_1223294                C 0 C 0
s Plecturocebus_dubius.k141_2078842                     19112 29 -     19696 a--t--tcta--catatct-------------gcaac-tttgcatcctt
i Plecturocebus_dubius.k141_2078842                 C 0 C 0
s Plecturocebus_grovesi.k141_242819                     18986 29 +    152463 a--t--tcta--catatct-------------gcaac-tttgcatcctt
i Plecturocebus_grovesi.k141_242819                 C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                  5743 29 +      8943 a--t--tcta--catatct-------------gcaac-tttgcatcctt
i Plecturocebus_hoffmannsi.k141_1595076             C 0 C 0
s Plecturocebus_miltoni.k141_841561                      8703 29 +    134592 a--t--tcta--catatct-------------gcaac-tttgcatcctt
i Plecturocebus_miltoni.k141_841561                 C 0 C 0
s Plecturocebus_moloch.k141_890597                      19296 29 -     75465 a--t--tcta--catatct-------------gcaac-tttgcatcctt
i Plecturocebus_moloch.k141_890597                  C 0 C 0
s Pongo_abelii.NDHI03003816.1                          183339 29 -    373494 A--T--TGTA--CATATCT-------------GCAAC-TTTGCATCCTT
i Pongo_abelii.NDHI03003816.1                       C 0 C 0
s Pongo_pygmaeus.ctg62                               19803242 29 +  19899266 a--t--tgta--catatct-------------gcaac-tttgcatcctt
i Pongo_pygmaeus.ctg62                              C 0 C 0
s Presbytis_comata.k141_672698                           1392 29 -     15069 a--t--ccta--cgtgtct-------------gcaac-tttgcatcctt
i Presbytis_comata.k141_672698                      C 0 C 0
s Presbytis_mitrata.k141_860013                          1526 29 +     14865 a--t--ccta--cgtgtct-------------gcaac-tttgcatcctt
i Presbytis_mitrata.k141_860013                     C 0 C 0
s Prolemur_simus.MPIZ01000048.1                       6844737 29 +  12164890 A--T--CCTA--CACATCT-------------GCAAC-TTCGTATCCTT
i Prolemur_simus.MPIZ01000048.1                     C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                664017 29 -   2312742 A--T--CCTA--CACATCT-------------GCAAC-TTTGTTTCCTT
i Propithecus_coquerelli.NW_012147997.1             C 0 C 0
s Propithecus_coronatus.k141_844990                     30769 29 +     30823 a--t--ccta--cacatct-------------gcaac-tttgtttcctt
i Propithecus_coronatus.k141_844990                 C 0 C 0
s Propithecus_diadema.k141_577245                       39206 29 +     52369 a--t--ccta--cacatct-------------gcaac-tttgtttcctt
i Propithecus_diadema.k141_577245                   C 0 C 0
s Propithecus_edwardsi.k141_1317105                     31595 29 -     44753 a--t--ccta--cacatct-------------gcaac-tttgtttcctt
i Propithecus_edwardsi.k141_1317105                 C 0 C 0
s Propithecus_perrieri.k141_7554                        13517 29 +     27322 a--t--ccta--cacatct-------------gcaac-tttgtttcctt
i Propithecus_perrieri.k141_7554                    C 0 C 0
s Propithecus_tattersalli.k141_907138                   13161 29 -     53241 a--t--ccta--cacatct-------------gcaac-tttgtttcctt
i Propithecus_tattersalli.k141_907138               C 0 C 0
s Propithecus_verreauxi.k141_158021                     35432 29 -     48185 a--t--ccta--cacatct-------------gcaac-tttgtttcctt
i Propithecus_verreauxi.k141_158021                 C 0 C 0
s Psammomys_obesus.NESX01026517.1                       28955 29 +     77221 a--t--ccta--agtatct-------------gccaa-tgtatgccatt
i Psammomys_obesus.NESX01026517.1                   C 0 C 0
s Pygathrix_cinerea.k141_374971                         25517 29 +     56732 a--t--ccta--cgtgtct-------------gcaac-ttcgcatcctt
i Pygathrix_cinerea.k141_374971                     C 0 C 0
s Pygathrix_nigripes_b.ctg79                             6802007 29 +   6970761 a--t--ccta--cgtgtct-------------gcaac-ttcgcatcctt
i Pygathrix_nigripes_b.ctg79                           C 0 C 0
s Pygathrix_nigripes_a.k141_101123                         1399 29 +     18040 a--t--ccta--cgtgtct-------------gcaac-ttcgcatcctt
i Pygathrix_nigripes_a.k141_101123                    C 0 C 0
s Rattus_norvegicus.chr11                            13910899 29 +  90463843 G--T--CTTC--AGTGTGT-------------GCCTA-CGTATGCCGTT
i Rattus_norvegicus.chr11                           C 0 C 0
s Rhinopithecus_bieti.k119_102124                       11954 29 -     14454 a--t--ccta--cgtgtct-------------gcaac-tttgcatcctt
i Rhinopithecus_bieti.k119_102124                   C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1               206373280 29 - 206558726 a--t--ccta--cgtgtct-------------gcaac-tttgcatcctt
i Rhinopithecus_roxellana.NC_044549.1               C 0 C 0
s Rhinopithecus_strykeri.ctg4                        44850928 29 -  45163003 a--t--ccta--cgtgtct-------------gcaac-tttgcatcctt
i Rhinopithecus_strykeri.ctg4                       C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                 15668721 29 -  43202129 A--T--TCTA--CATATCT-------------GCAAC-GTTGCATCCTT
i Saimiri_boliviensis.NW_024100938.1                C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                     596 29 +     34089 a--t--tcta--catatct-------------gcaac-gttgcatcctt
i Saimiri_cassiquiarensis.k141_808270               C 0 C 0
s Saimiri_macrodon.k141_2087127                           527 29 -     60842 a--t--tcta--catatct-------------gcaac-gttgcatcctt
i Saimiri_macrodon.k141_2087127                     C 0 C 0
s Saimiri_oerstedii.k141_841116                           596 29 +     67014 a--t--tcta--catatct-------------gcaac-gttgcatcctt
i Saimiri_oerstedii.k141_841116                     C 0 C 0
s Saimiri_sciureus.k141_1947592                           596 29 +     60816 a--t--tcta--catatct-------------gcaac-gttgcatcctt
i Saimiri_sciureus.k141_1947592                     C 0 C 0
s Saimiri_ustus.k141_1282476                              524 29 -     76454 a--t--tcta--catatct-------------gcaac-gttgcatcctt
i Saimiri_ustus.k141_1282476                        C 0 C 0
s Sapajus_apella.ctg10                               17337104 29 -  30362882 a--t--tcta--catatct-------------gcaac-tttgcatcctt
i Sapajus_apella.ctg10                              C 0 C 0
s Sapajus_macrocephalus.k141_966464                     16705 29 -     62485 a--t--tcta--catatct-------------gcaac-tttgcatcctt
i Sapajus_macrocephalus.k141_966464                 C 0 C 0
s Semnopithecus_entellus.k141_1527475                   23942 29 +     26421 a--t--ccta--cgtgtct-------------gcaac-tttgcatcctt
i Semnopithecus_entellus.k141_1527475               C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                   4404 29 +     20762 a--t--ccta--cgtgtct-------------gcaac-tttgcatcctt
i Semnopithecus_hypoleucos.k141_761524              C 0 C 0
s Semnopithecus_johnii.k141_1351450                     38137 29 +     40653 a--t--ccta--cgtgtct-------------gcaac-tttgcatcctt
i Semnopithecus_johnii.k141_1351450                 C 0 C 0
s Semnopithecus_priam.k141_198153                        8696 29 -     12194 a--t--ccta--cgtgtct-------------gcaac-tttgcatcctt
i Semnopithecus_priam.k141_198153                   C 0 C 0
s Semnopithecus_schistaceus.k141_653647                 22115 29 -     27512 a--t--ccta--cgtgtct-------------gcaac-tttgcatcctt
i Semnopithecus_schistaceus.k141_653647             C 0 C 0
s Semnopithecus_vetulus.k141_642050                     31136 29 -     33692 a--t--ccta--cgtgtct-------------gcaac-tttgcatcctt
i Semnopithecus_vetulus.k141_642050                 C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332               94219 22 -    120886 ------------ATTAGCT-------------GCCAA-TGCATGT-ATT
i Sigmodon_hispidus.SigHis_scaffold_11332           C 0 C 0
s Spermophilus_dauricus.KZ294190.1                    2236076 29 +   2842873 a--t--cttg--tacatct-------------accac-tttgtatccat
i Spermophilus_dauricus.KZ294190.1                  C 0 C 0
s Symphalangus_syndactylus.tarseq_24                 13898066 29 +  13920577 a--t--tcta--catatct-------------gcaac-tttgcatcctc
i Symphalangus_syndactylus.tarseq_24                C 0 C 0
s Tarsius_lariang.k141_609102                           22851 29 +     42269 a--g--ccta--catttct-------------gcaac-tttgtttcctt
i Tarsius_lariang.k141_609102                       C 0 C 0
s Tarsius_wallacei.k141_48636                           56159 29 +     65473 a--g--ccta--catttct-------------gcaac-tttgtttcctt
i Tarsius_wallacei.k141_48636                       C 0 C 0
s Theropithecus_gelada.CM009951.1                   194003436 29 - 194193292 A--T--CCTA--CGTGTCT-------------GCAAC-TTTGCATCCTT
i Theropithecus_gelada.CM009951.1                   C 0 C 0
s Trachypithecus_auratus.k141_738098                    22514 29 +     38948 a--t--ccta--cgtgtct-------------gcaac-tttgcatcctt
i Trachypithecus_auratus.k141_738098                C 0 C 0
s Trachypithecus_crepusculus.k141_1588528               16241 29 -     32910 a--t--ccta--cgtgtct-------------gcaac-tttgcatcctt
i Trachypithecus_crepusculus.k141_1588528           C 0 C 0
s Trachypithecus_cristatus.k141_27198                   22139 29 +     24652 a--t--ccta--cgtgtct-------------gcaac-tttgcatcctt
i Trachypithecus_cristatus.k141_27198               C 0 C 0
s Trachypithecus_francoisi.k141_1178450                  1024 29 -      3559 a--t--ccta--cgtgtct-------------gcaac-tttgcatcctt
i Trachypithecus_francoisi.k141_1178450             C 0 C 0
s Trachypithecus_geei.k141_670367                       38963 29 -     54611 a--t--ccta--tgtgtct-------------gcaac-tttgcatcctt
i Trachypithecus_geei.k141_670367                   C 0 C 0
s Trachypithecus_germaini.k141_809503                   14962 29 +     17312 a--t--ccta--tgtgtct-------------gcaac-tttgcatcctt
i Trachypithecus_germaini.k141_809503               C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                22332 29 -     25040 a--t--ccta--cgtgtct-------------gcaac-tttgcatcctt
i Trachypithecus_hatinhensis.k141_357672            C 0 C 0
s Trachypithecus_laotum.k141_171445                       998 29 +      3528 a--t--ccta--cgtgtct-------------gcaac-tttgcatcctt
i Trachypithecus_laotum.k141_171445                 C 0 C 0
s Trachypithecus_leucocephalus.k141_283605              47360 29 +     51589 a--t--ccta--cgtgtct-------------gcaac-tttgcatcctt
i Trachypithecus_leucocephalus.k141_283605          C 0 C 0
s Trachypithecus_melamera.k141_238507                   10528 29 +     14732 a--t--ccta--cgtgtct-------------gcaac-tttgcatcctt
i Trachypithecus_melamera.k141_238507               C 0 C 0
s Trachypithecus_obscurus.k141_1115109                   1006 29 -     28054 a--t--ccta--cgtgtct-------------gcaac-tttgcatcctt
i Trachypithecus_obscurus.k141_1115109              C 0 C 0
s Trachypithecus_phayrei.ctg3                        44655801 29 -  44834318 a--t--ccta--cgtgtct-------------gcaac-tttgcatcctt
i Trachypithecus_phayrei.ctg3                       C 0 C 0
s Trachypithecus_pileatus.k141_469329                     811 29 +      3372 a--t--ccta--cgtgtct-------------gcaac-tttgcatcctt
i Trachypithecus_pileatus.k141_469329               C 0 C 0
s Tupaia_chinensis.KB320831.1                         2787013 29 -   3938065 a--t--tctg--catagct-------------gcaac-tttgtatcctg
i Tupaia_chinensis.KB320831.1                       I 102 I 9
s Tupaia_tana.TupTan_flattened_line_3657864                 0 29 +       342 A--t--tcta--tatagct-------------gcaac-tttgtatcctg
i Tupaia_tana.TupTan_flattened_line_3657864         N 0 C 0
s Varecia_rubra.k141_432109                              1683 29 -     20643 a--t--ccta--cacatct-------------gcaac-tttgtatcctt
i Varecia_rubra.k141_432109                         C 0 C 0
s Varecia_variegata.k141_775891                         21228 29 -     33872 a--t--ccta--cacatct-------------gcaac-tttgtatcctt
i Varecia_variegata.k141_775891                     C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                   123258 29 -    134049 a--t--cttg--cacatct-------------gccac-tttgcatccat
i Xerus_inauris.XerIna_scaffold_7898                C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                 12044 26 -     20485 A--T--CTTA--CAT---C-------------GTCAA-TGTGCATCCTT
i Zapus_hudsonius.ZapHud_scaffold_64392             C 0 C 0
e Hylobates_pileatus_b.LG03                                 92553610  0 - 189753342 C
e Otolemur_garnettii.GL873528.1                      18004869 68 -  38779656 I
e Otolemur_crassicaudatus.k141_321880                   35431 68 +     38679 I
e Galagoides_demidoff.k141_1769638                       6763 68 +     27357 I
e Galago_senegalensis.k141_964197                        9743 68 -     43889 I
e Galago_moholi.ctg555                                 207363 68 -    847004 I
e Nomascus_siki_b.tarseq_80                         20456  0 -  18771707 C
e Nomascus_annamensis.k141_745421                         374  0 -      4569 C
e Nomascus_gabriellae.k141_1350167                        785  0 +      9928 C

a score=0.000000
s hg38.chr4_GL000008v2_random                            8081 34 +    209709 cgaatt------c-tc---tatc-tc--------------c-att-t--tc-t----ct--------------------tctcacc--cc
s Acomys_cahirinus.AcoCah_scaffold_1625                108474 23 -    189883 TCATCT------G-CA---ATTC-TA--------------TGAGT-C--AT---------------------------------------
i Acomys_cahirinus.AcoCah_scaffold_1625             C 0 I 14
s Allactaga_bullata.AllBul_scaffold_70162                8762 37 -     22067 TTACTT------G-TA---TGTT-TC--------------T-ATT-T--CA-T----CC-TC-CCT---A-CAT-G---TT---------
i Allactaga_bullata.AllBul_scaffold_70162           C 0 I 1
s Allenopithecus_nigroviridis.k141_3103707              59103 34 +     61638 tgaatt------c-cc---tatc-tc--------------c-att-t--tc-c----ct--------------------cctcacc--cc
i Allenopithecus_nigroviridis.k141_3103707          C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                    50911 34 +     53391 tgaatt------c-cc---tatc-tc--------------c-att-t--tc-c----ct--------------------cctcacc--cc
i Allochrocebus_lhoesti.k141_4825038                C 0 C 0
s Allochrocebus_preussi.k141_1202907                     1635 34 +     72529 tgaatt------c-cc---tatc-tc--------------c-att-t--tc-c----ct--------------------cctcacc--cc
i Allochrocebus_preussi.k141_1202907                C 0 C 0
s Allochrocebus_solatus.k141_787528                      1212 34 +      3797 tgaatt------c-cc---tatc-tc--------------c-att-t--tc-c----ct--------------------cctcacc--cc
i Allochrocebus_solatus.k141_787528                 C 0 C 0
s Alouatta_belzebul.k141_1818029                         6297 33 -     18050 tgaatt------c-tt---tctt-tc--------------c--tt-t--tc-t----tt--------------------cctcact--cc
i Alouatta_belzebul.k141_1818029                    C 0 C 0
s Alouatta_caraya.k141_5460                              7414 33 -     11521 tgaatt------c-tt---tctt-tc--------------c--tt-t--tc-t----tt--------------------cctcact--cc
i Alouatta_caraya.k141_5460                         C 0 C 0
s Alouatta_discolor.k141_811576                          6972 33 -     21359 ttaatt------c-tt---tctt-tc--------------c--tt-t--tc-t----tt--------------------cctcact--cc
i Alouatta_discolor.k141_811576                     C 0 C 0
s Alouatta_juara.k141_1856473                            5355 33 +      7227 tgaatt------c-tt---tctt-tc--------------c--tt-t--tc-t----tt--------------------cctcact--cc
i Alouatta_juara.k141_1856473                       C 0 C 0
s Alouatta_macconnelli.k141_1331706                      6270 33 -     10438 tgaatt------c-tt---tctt-tc--------------c--tt-t--tc-t----tt--------------------cctcact--cc
i Alouatta_macconnelli.k141_1331706                 C 0 C 0
s Alouatta_nigerrima.k141_2718643                        2924 33 +      7047 tgaatt------c-tt---tctt-tc--------------c--tt-t--tc-t----tt--------------------cctcact--cc
i Alouatta_nigerrima.k141_2718643                   C 0 C 0
s Alouatta_palliata.k141_1316127                         6208 33 +     10410 tgaatt------c-tt---tctt-tc--------------c--tt-t--tc-t----tt--------------------cctcact--cc
i Alouatta_palliata.k141_1316127                    C 0 C 0
s Alouatta_puruensis.k141_390786                         7485 33 -      7615 tgaatt------c-tt---tctt-tc--------------c--tt-t--tc-t----tt--------------------cctcact--cc
i Alouatta_puruensis.k141_390786                    C 0 C 0
s Alouatta_seniculus.k141_990213                         2929 33 +      6429 tgaatt------c-tt---tctt-tc--------------c--tt-t--tc-t----tt--------------------cctcact--cc
i Alouatta_seniculus.k141_990213                    C 0 C 0
s Aotus_azarae.k141_3170768                             58612 34 +     78111 tgaatt------c-tt---tctt-tc--------------c-att-t--tc-t----ct--------------------cctcacc--cc
i Aotus_azarae.k141_3170768                         C 0 C 0
s Aotus_griseimembra.k141_3275623                        1543 34 +     22701 tgaatt------c-tt---tctt-tc--------------c-att-t--tc-t----ct--------------------cctcacc--ct
i Aotus_griseimembra.k141_3275623                   C 0 C 0
s Aotus_nancymaae.KZ196176.1                          5745503 34 +   9889416 tgaatt------c-tt---tctt-tc--------------c-att-t--tc-t----ct--------------------cctcacc--cc
i Aotus_nancymaae.KZ196176.1                        C 0 C 0
s Aotus_trivirgatus.k141_1740727                         2095 34 -    104377 tgaatt------c-tt---tctt-tc--------------c-att-t--tc-t----ct--------------------cctcact--cc
i Aotus_trivirgatus.k141_1740727                    C 0 C 0
s Aotus_vociferans.k141_718647                           2095 34 +     23246 tgaatt------c-tt---tctt-tc--------------c-att-t--tc-t----ct--------------------cctcact--cc
i Aotus_vociferans.k141_718647                      C 0 C 0
s Arctocebus_calabarensis.k141_1161114                  14400 38 +     17483 tgacct------a-ca---tctc-tc--------------c-att-c--aa-tggtcct--------------------tcccatc--ct
i Arctocebus_calabarensis.k141_1161114              C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                         9535356 34 +  39197703 tgaatt------c-tt---tctt-tc--------------c-att-t--tc-t----ct--------------------cctcgcc--cc
i Ateles_geoffroyi_b.tarseq_2582                       C 0 C 0
s Ateles_belzebuth.k141_1348307                         56644 34 +     85812 tgaatt------c-tt---tctt-tc--------------c-att-t--tc-t----ct--------------------cctcacc--cc
i Ateles_belzebuth.k141_1348307                     C 0 C 0
s Ateles_chamek.k141_1072810                             7641 34 +     89302 tgaatt------c-tt---tctt-tc--------------c-att-t--tc-t----ct--------------------cctcacc--cc
i Ateles_chamek.k141_1072810                        C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                         12150 34 -     58268 tgaatt------c-tt---tctt-tc--------------c-att-t--tc-t----ct--------------------cctcgcc--cc
i Ateles_geoffroyi_a.k141_1300742                     C 0 C 0
s Ateles_marginatus.k141_899112                         60138 34 +    119057 tgaatt------c-tt---tctt-tc--------------c-att-t--tc-t----ct--------------------cctcacc--cc
i Ateles_marginatus.k141_899112                     C 0 C 0
s Ateles_paniscus.k141_1631200                           2089 34 -     25888 tgaatt------c-tt---tctt-tc--------------c-att-t--tc-t----ct--------------------cctcacc--cc
i Ateles_paniscus.k141_1631200                      C 0 C 0
s Avahi_laniger.k141_2840928                             2955 29 -     16375 taacct------aaca---tctc-tc--------------c-att-t---c-t----tg--------------------cctc-------
i Avahi_laniger.k141_2840928                        C 0 C 0
s Avahi_peyrierasi.k141_767228                           8928 29 -      9688 taacct------aaca---tctc-tc--------------c-att-t---c-t----tg--------------------cctc-------
i Avahi_peyrierasi.k141_767228                      C 0 C 0
s Cacajao_ayresi.k141_724503                           110013 34 -    171031 tgaatt------c-tt---tctc-tc--------------c-att-t--tc-t----tt--------------------cctcatc--cc
i Cacajao_ayresi.k141_724503                        C 0 C 0
s Cacajao_calvus.k141_96166                              9039 34 +    125063 tgaatt------c-tt---tctc-tc--------------c-att-t--tc-t----ct--------------------cctcatc--cc
i Cacajao_calvus.k141_96166                         C 0 C 0
s Cacajao_hosomi.k141_303789                            11087 34 -    216513 tgaatt------c-tt---tctc-tc--------------c-att-t--tc-t----ct--------------------cctcatc--cc
i Cacajao_hosomi.k141_303789                        C 0 C 0
s Cacajao_melanocephalus.k141_1160263                    3626 34 -    134917 tgaatt------c-tt---tctc-tc--------------c-att-t--tc-t----ct--------------------cctcatc--cc
i Cacajao_melanocephalus.k141_1160263               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_647363               644 38 +      1887 TGATCT------A-CA---TCT--CT--------------C-ATT-T--CC-T----CC-TA-TAT-A-T-TCACA---TC---------
i Capromys_pilorides.CapPil_scaffold_647363         I 284 C 0
s Carlito_syrichta.NW_007248099.1                      305395 36 +    345090 TGAcct------a-ca---tctc-cc--------------c-att-t--cc-t----ct--------------------tccccttATCC
i Carlito_syrichta.NW_007248099.1                   C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037               26943 39 +     33760 tgactc------a-ta---tcac-cc--------------c-act-ccacc-t----gc--c--cc-a-c-accag---tc---------
i Castor_canadensis.CasCan_scaffold_47037           C 0 C 0
s Cavia_aperea.AVPZ01000278.1                        15783774 52 -  24422027 tttgct------a-tg---tat--acatataccaaaacatc-aTT-T--CC-T----GC-TA-CATAG-T-CAT-G---TC---------
i Cavia_aperea.AVPZ01000278.1                       I 115 C 0
s Cavia_porcellus.DS562889.1                         15795708 52 -  24440124 tttgct------a-tg---tat--acatatatcaaaacatc-att-t--CC-T----CC-TA-CATAG-T-CAT-G---TC---------
i Cavia_porcellus.DS562889.1                        I 115 C 0
s Cavia_tschudii.CavTsc_scaffold_488                   173899 52 +    436027 tttgct------a-tg---tat--acatatatcaaaacatc-atT-T--CC-T----CC-TA-CATAG-T-CAT-G---TC---------
i Cavia_tschudii.CavTsc_scaffold_488                I 115 C 0
s Cebus_albifrons.Contig22                           18886824 34 -  29618158 tgaatt------c-tt---tctc-tc--------------c-att-t--tc-t----ct--------------------cctcact--cc
i Cebus_albifrons.Contig22                          C 0 C 0
s Cebus_olivaceus.k141_93739                             4370 34 -     26817 tgaatt------c-tt---tctc-tc--------------c-att-t--tc-t----ct--------------------cctcact--cc
i Cebus_olivaceus.k141_93739                        C 0 C 0
s Cebus_unicolor.k141_239009                             8610 34 +     25043 tgaatt------c-tt---tctc-tc--------------c-att-t--tc-t----ct--------------------cctcact--cc
i Cebus_unicolor.k141_239009                        C 0 C 0
s Cephalopachus_bancanus.k141_702587                     4431 36 +     21754 tgacct------a-ca---tctc-cc--------------c-att-t--cc-t----ct--------------------tcccgttatcc
i Cephalopachus_bancanus.k141_702587                C 0 C 0
s Cercocebus_atys.KQ010443.1                          6550899 34 +   6739814 TGAATT------C-CC---TATC-TC--------------C-ATT-T--Tc-c----ct--------------------cctcacc--cc
i Cercocebus_atys.KQ010443.1                        C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                  52376 34 -     54931 tgaatt------c-cc---tatc-tc--------------c-att-t--tc-c----ct--------------------cctcacc--cc
i Cercocebus_chrysogaster.k141_2951608              C 0 C 0
s Cercocebus_lunulatus.k141_3387186                     17360 34 -     19697 tgaatt------c-cc---tatc-tc--------------c-att-t--tc-c----ct--------------------cctcacc--cc
i Cercocebus_lunulatus.k141_3387186                 C 0 C 0
s Cercocebus_torquatus.k141_3969582                     54891 34 -    107033 tgaatt------c-cc---tatc-tc--------------c-att-t--tc-c----ct--------------------cctcacc--cc
i Cercocebus_torquatus.k141_3969582                 C 0 C 0
s Cercopithecus_ascanius.k141_3371259                    1334 34 -      3853 tgaatt------c-cc---tatc-tc--------------c-att-t--tc-c----ct--------------------cctcacc--cc
i Cercopithecus_ascanius.k141_3371259               C 0 C 0
s Cercopithecus_cephus.k141_598190                      25266 34 +     30494 tgaatt------c-cc---tatc-tc--------------c-att-t--tc-c----ct--------------------cctcacc--cc
i Cercopithecus_cephus.k141_598190                  C 0 C 0
s Cercopithecus_diana.k141_1490386                       1289 34 -      4022 tgaatt------c-cc---tatc-tc--------------c-att-t--tc-c----ct--------------------cctcacc--cc
i Cercopithecus_diana.k141_1490386                  C 0 C 0
s Cercopithecus_hamlyni.k141_381099                      1179 34 -      3505 tgaatt------c-cc---tatc-tc--------------c-att-t--tc-c----ct--------------------cctcacc--cc
i Cercopithecus_hamlyni.k141_381099                 C 0 C 0
s Cercopithecus_lowei.k141_623764                       19990 34 +     35983 tgaatt------c-cc---tatc-tc--------------c-att-t--tc-c----ct--------------------cctcacc--cc
i Cercopithecus_lowei.k141_623764                   C 0 C 0
s Cercopithecus_albogularis.ctg51                          11985766 34 +  12117833 tgaatt------c-cc---tatc-tc--------------c-att-t--tc-c----ct--------------------cctcacc--cc
i Cercopithecus_albogularis.ctg51                         C 0 C 0
s Cercopithecus_mona.ctg12                           46473262 34 +  46592721 tgaatt------c-cc---tatc-tc--------------c-att-t--tc-c----ct--------------------cctcacc--cc
i Cercopithecus_mona.ctg12                          C 0 C 0
s Cercopithecus_neglectus.k141_1474992                  31089 34 +     33420 tgaatt------c-cc---tatc-tc--------------c-att-t--tc-c----ct--------------------cctcacc--cc
i Cercopithecus_neglectus.k141_1474992              C 0 C 0
s Cercopithecus_nictitans.k141_675209                    1125 34 -      3443 tgaatt------c-cc---tatc-tc--------------c-att-t--tc-c----ct--------------------cctcacc--cc
i Cercopithecus_nictitans.k141_675209               C 0 C 0
s Cercopithecus_petaurista.k141_2037881                  2116 34 -      4669 tgaatt------c-cc---tatc-tc--------------c-att-t--tc-c----ct--------------------cctcacc--cc
i Cercopithecus_petaurista.k141_2037881             C 0 C 0
s Cercopithecus_pogonias.k141_1977419                    1920 34 -      4411 tgaatt------c-cc---tatc-tc--------------c-att-t--tc-c----ct--------------------cctcacc--gc
i Cercopithecus_pogonias.k141_1977419               C 0 C 0
s Cercopithecus_roloway.k141_3372345                     1440 34 -      4205 tgaatt------c-cc---tatc-tc--------------c-att-t--tc-c----ct--------------------cctcacc--cc
i Cercopithecus_roloway.k141_3372345                C 0 C 0
s Cheirogaleus_major.k141_1157592                       55291 29 -     68416 taacct------aaga---tctc-tc--------------c-att-t---c-t----tg--------------------cctc-------
i Cheirogaleus_major.k141_1157592                   C 0 C 0
s Cheirogaleus_medius.k141_133808                        4341 29 +     13308 taacct------aaca---tctc-tc--------------c-att-t---c-t----tg--------------------cctc-------
i Cheirogaleus_medius.k141_133808                   C 0 C 0
s Cheracebus_lucifer.k141_619653                         1623 34 -     18223 tgaatt------c-tt---tctc-tc--------------c-att-t--tc-t----ct--------------------cctcacc--cc
i Cheracebus_lucifer.k141_619653                    C 0 C 0
s Cheracebus_lugens.k141_203936                         18646 34 +     25473 tgaatt------c-tt---tctc-tc--------------c-att-t--tc-t----ct--------------------cctcacc--cc
i Cheracebus_lugens.k141_203936                     C 0 C 0
s Cheracebus_regulus.k141_2128895                       37685 34 +     57117 tgaatt------c-tt---tctc-tc--------------c-att-t--tc-t----ct--------------------cctcacc--cc
i Cheracebus_regulus.k141_2128895                   C 0 C 0
s Cheracebus_torquatus.k141_315545                      42360 34 +     54541 tgaatt------c-tt---tctc-tc--------------c-att-t--tc-t----ct--------------------cctcacc--cc
i Cheracebus_torquatus.k141_315545                  C 0 C 0
s Chinchilla_lanigera.JH721867.1                     15957800 39 +  43084221 tgacgt------a-ta---tct--tc--------------c-atttt--tc-t----cctac--at-t-c-tcatg---tc---------
i Chinchilla_lanigera.JH721867.1                    I 14 C 0
s Chiropotes_israelita.k141_1189915                     67234 34 +    196370 tgaatt------c-tt---tctc-tc--------------c-att-t--tc-t----ct--------------------cctcatc--cc
i Chiropotes_israelita.k141_1189915                 C 0 C 0
s Chiropotes_sagulatus.k141_773804                      11408 34 +     40510 tgaatt------c-tt---tctc-tc--------------c-att-t--tc-t----ct--------------------cctcatc--cc
i Chiropotes_sagulatus.k141_773804                  C 0 C 0
s Chlorocebus_aethiops.ctg22                         15134720 34 -  15256731 tgaatt------c-cc---tatc-tc--------------c-att-t--tc-c----ct--------------------cctcacc--cc
i Chlorocebus_aethiops.ctg22                        C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                  29766 34 -     53260 tgaatt------c-cc---tatc-tc--------------c-att-t--tc-c----ct--------------------cctcacc--cc
i Chlorocebus_pygerythrus.k141_1486215              C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                    101140214 34 + 101219884 TGAATT------C-CC---TATC-TC--------------C-ATT-T--Tc-c----ct--------------------cctcacc--cc
i Chlorocebus_sabaeus.CM001963.2                    C 0 C 0
s Colobus_angolensis.KN985967.1                      10878796 34 +  10971483 tgaatt------c-cc---tatc-tc--------------a-att-t--tc-C----CG--------------------cctcacc--cc
i Colobus_angolensis.KN985967.1                     C 0 C 0
s Colobus_guereza.LG08                              147659955 34 + 156195979 tgaatt------c-cc---tatc-tc--------------a-att-t--tc-c----cg--------------------cctcacc--cc
i Colobus_guereza.LG08                              C 0 C 0
s Colobus_polykomos.k141_1406057                        11940 34 +     23629 tgaatt------c-cc---tatc-tc--------------c-att-t--tc-c----cg--------------------cctcacc--cc
i Colobus_polykomos.k141_1406057                    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949             273911 38 -    399297 ttatct------t-ca---tttc-tc--------------tgagt-c--ac-t----atta----a-a-a-ctctg---tc---------
i Cricetomys_gambianus.CriGam_scaffold_949          C 0 C 0
s Cricetulus_griseus.LT883672.1                      53025386 38 +  72327488 TTATCT------G-CA---TTTC-TC--------------TGTGT-C--AT-C----TT-----TT-G-AACCCTG---CC---------
i Cricetulus_griseus.LT883672.1                     C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447              204624 39 -    956709 TGATCT------A-CG---CCCC-GC--------------C-GTT-T--CC-T----CCTCT-ACA-G---CCTTG---TC---------
i Ctenodactylus_gundi.CteGun_scaffold_447           C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489             26805 38 -     67205 TGATCT------A-CA---TCT--CT--------------T-TTT-T--CC-T----CT-TA-CAT---A-C-TTCCA-TC---------
i Ctenomys_sociabilis.CteSoc_scaffold_19489         I 292 C 0
s Cuniculus_paca.CunPac_flattened_line_16637            14571 38 +     26546 tgacct------a-ta---gct--tt--------------c-att-t--cc-t----cctac--at-a-g-tcatg---tc---------
i Cuniculus_paca.CunPac_flattened_line_16637        I 33 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634         56044 38 -    236241 tgacct------a-ta---tct--cc--------------c-att-t--cc-t----cctac--at-g-g-tcatg---tc---------
i Dasyprocta_punctata.DasPun_flattened_line_634     I 33 C 0
s Daubentonia_madagascariensis.ctg11                 16841157 33 +  31942871 caacct------a-ca---tctc-tc--------------c-att-t---c-t----tg--------------------cccctct--cc
i Daubentonia_madagascariensis.ctg11                C 0 I 4
s Dolichotis_patagonum.DolPat_scaffold_14102            33286 52 -     73477 tttgct------a-tg---cat--acgtatatcaaaacatc-aTT-T--CC-T----CC-TA-CATAG-T-C-AGG---TC---------
i Dolichotis_patagonum.DolPat_scaffold_14102        I 115 C 0
s Ellobius_lutescens.LOEQ01003611.1                    235574 37 -    369425 -tattt------g-ta---tttt-tc--------------tgcat-C--AT-C----TTTTG-GAT---T-C-T-G---AC---------
i Ellobius_lutescens.LOEQ01003611.1                 C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                       2583 38 -      7838 ttattt------g-ta---tttt-tc--------------tgcat-C--AT-C----TTTCA-GAT-----CCT-G---AC---------
i Ellobius_talpinus.LOJH01090055.1                  C 0 C 0
s Erythrocebus_patas.Contig8                         48766899 34 -  48907691 tgaatt------c-cc---tatc-tc--------------c-att-t--tc-c----ct--------------------cctcacc--cc
i Erythrocebus_patas.Contig8                        C 0 C 0
s Eulemur_albifrons.k141_715837                          1365 28 +     13586 taacct------a-ca---tctc-tt--------------c-atg-t---c-t----tg--------------------cctc-------
i Eulemur_albifrons.k141_715837                     C 0 C 0
s Eulemur_collaris.k141_311830                           1302 28 -      6809 taacct------a-ca---tctc-tt--------------c-atg-t---c-t----tg--------------------cctc-------
i Eulemur_collaris.k141_311830                      C 0 C 0
s Eulemur_coronatus.k141_3240342                         7772 28 +     36558 taacct------a-ca---tctc-tt--------------c-atg-t---c-t----tg--------------------cctc-------
i Eulemur_coronatus.k141_3240342                    C 0 C 0
s Eulemur_flavifrons.k141_903901                         4089 28 +     60246 taacct------a-ca---tctc-tt--------------c-atg-t---c-t----tg--------------------cctc-------
i Eulemur_flavifrons.k141_903901                    C 0 C 0
s Eulemur_fulvus.k141_653297                             7577 28 +    109717 taacct------a-ca---tctc-tt--------------c-atg-t---c-t----tg--------------------cctc-------
i Eulemur_fulvus.k141_653297                        C 0 C 0
s Eulemur_macaco.k141_1341545                           11951 28 +     16540 taacct------a-ca---tctc-tt--------------c-atg-t---c-t----tg--------------------cctc-------
i Eulemur_macaco.k141_1341545                       C 0 C 0
s Eulemur_mongoz.k141_825972                            12228 28 +     27497 taacct------a-ca---tctc-tt--------------c-atg-t---c-t----tg--------------------cctc-------
i Eulemur_mongoz.k141_825972                        C 0 C 0
s Eulemur_rubriventer.k141_411740                       14684 28 +     26808 taacct------a-ca---tctc-tt--------------c-atg-t---c-t----tg--------------------cctc-------
i Eulemur_rubriventer.k141_411740                   C 0 C 0
s Eulemur_rufus.k141_1620292                            29418 28 +     46535 taacct------a-ca---tctc-tt--------------c-atg-t---c-t----tg--------------------cctc-------
i Eulemur_rufus.k141_1620292                        C 0 C 0
s Eulemur_sanfordi.k141_186399                          12141 28 -     29447 taacct------a-ca---tctc-tt--------------c-atg-t---c-t----tg--------------------cctc-------
i Eulemur_sanfordi.k141_186399                      C 0 C 0
s Fukomys_damarensis.KN123630.1                      13889367 45 -  19261668 tgatctttgacct-ac--gtct--cc--------------c-att-c--cg-c----cctacatc----c-tcttt---tc---------
i Fukomys_damarensis.KN123630.1                     I 27 C 0
s Galeopterus_variegatus.GalVar_scaffold_354           152619 12 +    324696 tcatct------g-ca---tct--------------------------------------------------------------------
i Galeopterus_variegatus.GalVar_scaffold_354        C 0 I 7
s Glis_glis.GliGli_scaffold_79770                        9046 37 -     18683 tgacct------a-ca---tcta-tc--------------c-act-t--ca-t----cctacatc-------cctg---tt---------
i Glis_glis.GliGli_scaffold_79770                   C 0 C 0
s Gorilla_beringei.k141_111300                           1473 34 -     14630 tgaatt------c-tc---tatc-tc--------------c-att-t--tc-t----ct--------------------cctcacc--cc
i Gorilla_beringei.k141_111300                      C 0 C 0
s Gorilla_gorilla.LT578340.1                        119648571 34 - 195582420 tgaatt------c-tc---tatc-tc--------------c-att-t--tc-t----ct--------------------cctcacc--cc
i Gorilla_gorilla.LT578340.1                        C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493               73603 37 +    118900 TGACCT------A-TA---TCTA-CC--------------C-AAT-T--TA-T----TC----TAC-A-A-CCTTG---TT---------
i Graphiurus_murinus.GraMur_scaffold_4493           C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                     1910 28 +      3980 taacct------a-ca---tctc-tc--------------c-atg-t---c-t----tg--------------------cctc-------
i Hapalemur_alaotrensis.k141_1198205                C 0 C 0
s Hapalemur_gilberti.k141_97962                         24390 28 +     26611 taacct------a-ca---tctc-tc--------------c-atg-t---c-t----tg--------------------cctc-------
i Hapalemur_gilberti.k141_97962                     C 0 C 0
s Hapalemur_griseus.k141_1387522                         1844 28 +     56096 taacct------a-ca---tctc-tc--------------c-atg-t---c-t----tg--------------------cctc-------
i Hapalemur_griseus.k141_1387522                    C 0 C 0
s Hapalemur_meridionalis.k141_186231                    25117 28 -     42470 taacct------a-ca---tctc-tc--------------c-atg-t---c-t----tg--------------------cctc-------
i Hapalemur_meridionalis.k141_186231                C 0 C 0
s Hapalemur_occidentalis.k141_797938                    41714 28 -     54384 taacct------a-ca---tctc-tc--------------c-atg-t---c-t----tg--------------------cctc-------
i Hapalemur_occidentalis.k141_797938                C 0 C 0
s Heterocephalus_glaber.JH602058.1                    2547358 39 +  31725842 tgactt------a-at--gtct--cc--------------c-att-t--cc-t----cctac--at-a-c-tcttc---cc---------
i Heterocephalus_glaber.JH602058.1                  I 30 C 0
s Hoolock_leuconedys.ctg649                                98145 34 +    115816 tgaatt------c-tc---tgtc-tc--------------c-att-t--tc-t----ct--------------------cctcacc--cc
i Hoolock_leuconedys.ctg649                            C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       16272  2 -    119109 -------------------------------------------------------------------------------TA---------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259   N 0 C 0
s Hylobates_abbotti.k141_493872                          1282 34 +      5897 tgaatt------c-tc---tgtc-tc--------------c-att-t--tc-t----ct--------------------cctcacc--cc
i Hylobates_abbotti.k141_493872                     C 0 C 0
s Hylobates_agilis.k141_282275                            495 34 +      1846 tgaatt------c-tc---tgtc-tc--------------c-att-t--tc-t----gt--------------------cctcacc--cc
i Hylobates_agilis.k141_282275                      C 0 C 0
s Hylobates_klossii.k141_466549                          7740 34 +     11537 tgaatt------c-tc---tgtc-tc--------------c-att-t--tc-t----ct--------------------cctcacc--cc
i Hylobates_klossii.k141_466549                     C 0 C 0
s Hylobates_muelleri.k141_1133650                         717 34 -      2775 tgaatt------c-tc---tgtc-tc--------------c-att-t--tc-t----ct--------------------cctcacc--cc
i Hylobates_muelleri.k141_1133650                   C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                 2463 38 +     22540 TGACCT------A-GT---TCT--CC--------------C-ATT-T--CC-T----CC-TA-CAT-ACT-CAT-G---CC---------
i Hystrix_cristata.HysCri_scaffold_50788            I 105 C 0
s Ictidomys_tridecemlineatus.JH393315.1               7122179 18 +  13083262 tgacct------g-ca---tcga-tc--------------c-at----------------------------------------------
i Ictidomys_tridecemlineatus.JH393315.1             C 0 I 13
s Indri_indri.k141_3334527                               8353 29 +      9207 taacct------aaca---tctc-tc--------------c-att-t---c-t----tg--------------------cctc-------
i Indri_indri.k141_3334527                          C 0 C 0
s Jaculus_jaculus.JH725517.1                          8561723 37 +  11848649 ttattt------g-ta---tgtt-cC--------------T-ATT-T--CA-T----TC-TC-CCT---A-CAT-A---TT---------
i Jaculus_jaculus.JH725517.1                        C 0 I 1
s Lagothrix_lagothricha.k141_12968                      46199 34 -    147782 tggatt------c-tt---tctt-tc--------------c-att-t--tc-t----ct--------------------cctcagc--cc
i Lagothrix_lagothricha.k141_12968                  C 0 C 0
s Lemur_catta.scaffold_1                            258403393 28 - 285822530 taacct------a-ca---tctc-tc--------------c-atg-t---c-t----tg--------------------cctc-------
i Lemur_catta.scaffold_1                            C 0 C 0
s Lepilemur_ankaranensis.k141_884009                    20286 29 +     39228 taacct------aata---tctc-tc--------------c-att-t---c-t----tg--------------------cctc-------
i Lepilemur_ankaranensis.k141_884009                C 0 C 0
s Lepilemur_dorsalis.k141_134267                        49662 29 +     63517 taacct------aaca---tctc-tc--------------c-att-t---c-t----tg--------------------cctc-------
i Lepilemur_dorsalis.k141_134267                    C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                    74882 29 +    116806 taacct------aaca---tctc-tc--------------c-att-t---c-t----tg--------------------cctc-------
i Lepilemur_ruficaudatus.k141_617879                C 0 C 0
s Lepilemur_septentrionalis.k141_578524                 27922 29 -     33031 taacct------aaca---tctc-tc--------------c-att-t---c-t----tg--------------------cctc-------
i Lepilemur_septentrionalis.k141_578524             C 0 C 0
s Lophocebus_aterrimus.ctg55                         19243985 34 +  19376315 tgaatt------c-cc---tatc-tc--------------c-att-t--tc-c----ct--------------------cctcacc--cc
i Lophocebus_aterrimus.ctg55                        C 0 C 0
s Loris_lydekkerianus.k141_550999                        6895 38 +     84689 tcacct------a-ca---tctc-tc--------------c-att-t--at-tgctcct--------------------tcccatc--ct
i Loris_lydekkerianus.k141_550999                   C 0 C 0
s Loris_tardigradus.ctg97                             3774654 38 +   6799190 tcacct------a-ca---tctc-tc--------------c-att-t--at-tgctcct--------------------tcccatc--ct
i Loris_tardigradus.ctg97                           C 0 C 0
s Macaca_arctoides.k141_2201161                         15671 34 +     74745 tgaatt------c-cc---tatc-tc--------------c-att-t--tc-c----ct--------------------cctcacc--cc
i Macaca_arctoides.k141_2201161                     C 0 C 0
s Macaca_assamensis.Contig65                         12702177 34 +  12821369 tgaatt------c-cc---tatc-tc--------------c-att-t--tc-c----ct--------------------cctcacc--cc
i Macaca_assamensis.Contig65                        C 0 C 0
s Macaca_cyclopis.k119_1168412                           4270 34 +      6569 tgaatt------c-cc---tatc-tc--------------c-att-t--tc-c----ct--------------------cctcacc--cc
i Macaca_cyclopis.k119_1168412                      C 0 C 0
s Macaca_fascicularis.k141_155037                       42570 34 +     63263 tgaatt------c-cc---tatc-tc--------------c-att-t--tc-c----ct--------------------cctcact--cc
i Macaca_fascicularis.k141_155037                   C 0 C 0
s Macaca_fuscata.k119_1068107                           11147 34 +     12679 tgaatt------c-cc---tgtc-tc--------------c-att-t--tc-c----ct--------------------cctcacc--cc
i Macaca_fuscata.k119_1068107                       C 0 C 0
s Macaca_leonina.k141_3421209                             720 34 +      3017 tgaatt------c-cc---tatc-tc--------------c-att-t--tc-c----ct--------------------cctcacc--cc
i Macaca_leonina.k141_3421209                       C 0 C 0
s Macaca_maura.k141_251854                              42332 34 -     79256 tgaatt------c-cc---tatc-tc--------------c-att-t--tc-c----ct--------------------cctcacc--cc
i Macaca_maura.k141_251854                          C 0 C 0
s Macaca_mulatta.NC_041755.1                        196031252 34 + 196197964 TGAATT------C-CC---TATC-TC--------------C-ATT-T--TC-C----Ct--------------------cctcacc--cc
i Macaca_mulatta.NC_041755.1                        C 0 C 0
s Macaca_nemestrina.KQ004885.1                       11441356 34 +  11645122 TGAATT------C-CC---TATC-TC--------------C-ATT-T--Tc-c----ct--------------------cctcacc--cc
i Macaca_nemestrina.KQ004885.1                      C 0 C 0
s Macaca_nigra.k141_282495                               1282 34 -     46448 tgaatt------c-cc---tatc-tc--------------c-att-t--tc-c----ct--------------------cctcacc--cc
i Macaca_nigra.k141_282495                          C 0 C 0
s Macaca_radiata.k141_1580474                            1109 34 -      3617 tgaatt------c-cc---tatc-tc--------------c-att-t--tc-c----ct--------------------cctcacc--cc
i Macaca_radiata.k141_1580474                       C 0 C 0
s Macaca_siberu.k141_741907                             11442 34 -     55006 tgaatt------c-cc---tatc-tc--------------c-att-t--tc-c----ct--------------------cctcacc--cc
i Macaca_siberu.k141_741907                         C 0 C 0
s Macaca_silenus.Contig12                            43836481 34 +  43892939 tgaatt------c-cc---tatc-tc--------------c-att-t--tc-c----ct--------------------cctcacc--cc
i Macaca_silenus.Contig12                           C 0 C 0
s Macaca_thibetana.k99_116940                            3704 34 -      5978 tgaatt------c-cc---tatc-tc--------------c-att-t--tc-c----ct--------------------cctcacc--cc
i Macaca_thibetana.k99_116940                       C 0 C 0
s Macaca_tonkeana.k141_2870633                           1284 34 -     27140 tgaatt------c-cc---tatc-tc--------------c-att-t--tc-c----ct--------------------cctcacc--cc
i Macaca_tonkeana.k141_2870633                      C 0 C 0
s Mandrillus_leucophaeus.scaffold125                 43433145 34 -  43563597 tgaatt------c-cc---tatc-tc--------------c-att-t--tc-c----ct--------------------cctcacc--cc
i Mandrillus_leucophaeus.scaffold125                C 0 C 0
s Mandrillus_sphinx.Contig144                         4445971 34 -   4543643 tgaatt------c-cc---tatc-tc--------------c-att-t--tc-c----ct--------------------cctcacc--cc
i Mandrillus_sphinx.Contig144                       C 0 C 0
s Marmota_marmota.CZRN01000005.1                     36870023 18 +  64221397 tgacct------g-ca---taga-tc--------------c-at----------------------------------------------
i Marmota_marmota.CZRN01000005.1                    C 0 I 13
s Meriones_unguiculatus.MerUng_scaffold_52233            7923 23 +     15977 tcacct------g-ca---tttc-cA--------------TGAGT-T--AT---------------------------------------
i Meriones_unguiculatus.MerUng_scaffold_52233       C 0 I 15
s Mesocricetus_auratus.KB708139.1                     1042868 38 -  26018355 ttatct------g-ca---tttc-tc--------------tgtat-c--at-c----ttt---t-g-a-a-ccctg---cc---------
i Mesocricetus_auratus.KB708139.1                   C 0 C 0
s Microcebus_murinus.CM007691.1                      16506508 28 +  47401472 taa-ct------AACA---TCTC-TC--------------C-ATT-T---C-T----TG--------------------CCTC-------
i Microcebus_murinus.CM007691.1                     C 0 C 0
s Microtus_ochrogaster.CM001673.1                    22815234 38 -  98408828 ttattt------g-ta---tttc-tc--------------tgcaT-C--AT-C----TTTTG-AAT-----CCT-G---AC---------
i Microtus_ochrogaster.CM001673.1                   C 0 C 0
s Miopithecus_ogouensis.k141_2666161                    31819 34 +     34273 tgaatt------c-cc---tatc-tc--------------c-att-t--tc-c----ct--------------------cctcacc--cc
i Miopithecus_ogouensis.k141_2666161                C 0 C 0
s Mirza_zaza.k141_226143                                 1920 30 +      8497 taacct------aaca---tctc-tc--------------c-att-tc--c-t----tg--------------------cctc-------
i Mirza_zaza.k141_226143                            C 0 C 0
s Mus_caroli.LT608236.1                              70761412 14 +  92629107 ---------------------------------------------------------TT--T-TCA-A-A-C-TTC---CC---------
i Mus_caroli.LT608236.1                             I 21 C 0
s Mus_musculus.chr16                                 75484487 14 +  98207768 ---------------------------------------------------------TT--T-TCA-A-A-C-TTC---CC---------
i Mus_musculus.chr16                                I 21 C 0
s Mus_pahari.LT608305.1                              67549026 14 +  89017189 ---------------------------------------------------------ttt---tct-a-A-C-TTT---CC---------
i Mus_pahari.LT608305.1                             I 21 C 0
s Mus_spretus.CM004110.1                             74324125 14 +  97876770 ---------------------------------------------------------TT--T-TCA-A-A-C-TTC---CC---------
i Mus_spretus.CM004110.1                            I 21 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643          6920 37 +     98495 tgacct------a-ca---tcgt-tc--------------c-act-t--ta-t----cctacatc-------cctg---tt---------
i Muscardinus_avellanarius.MusAve_scaffold_9643     C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                 86396 38 -    117718 TGATCT------A-CA---TCT--AT--------------C-ATT-T--CC-T----CC----TAT-A-T-ACT-GACATC---------
i Myocastor_coypus.MyoCoy_scaffold_3653             I 285 C 0
s Nannospalax_galili.KL201303.1                        107192 39 +    362372 ttgcct------g-ca---ttttctt--------------c-atg-c--tttt----ct--c-t-g-a-g-ccctg---cc---------
i Nannospalax_galili.KL201303.1                     C 0 C 0
s Nasalis_larvatus.k141_153429                           4184 34 +     48152 tgaatt------c-cc---tatc-tc--------------c-att-t--tc-c----cg--------------------cctcacc--cc
i Nasalis_larvatus.k141_153429                      C 0 C 0
s Nycticebus_bengalensis.LG16                        65563243 38 -  95554990 tcacct------a-ca---tctc-tc--------------c-att-t--at-tgctcct--------------------tcccatc--ct
i Nycticebus_bengalensis.LG16                       C 0 C 0
s Nycticebus_coucang.k141_7268257                        2258 38 -      2537 tcacct------a-ca---tctc-tc--------------c-att-t--at-tgctcct--------------------tcccatc--ct
i Nycticebus_coucang.k141_7268257                   C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17  65665606 38 +  89412551 tcacct------a-ca---tctc-tc--------------c-att-t--at-tgctcct--------------------tcccatc--ct
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17 C 0 C 0
s Octodon_degus.JH651621.1                            3674934 38 +  10294119 TGATCT------G-CA---TCT--CT--------------C-ATT-T--AC-T----GC-TA-CAT-GCT-CAT-G---TC---------
i Octodon_degus.JH651621.1                          I 291 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821              121052 38 +    145789 TTATTT------G-TA---TTTT-TC--------------TGCAT-C--AT-C----TTTTG-AAT-----CCT-G---AC---------
i Ondatra_zibethicus.OndZib_scaffold_6821           C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578              32993 38 +     62360 GTATAG------G-CA---TTGC-TC--------------TGAGT-C--AT-A----TT-----TT-G-AACCCTG---CC---------
i Onychomys_torridus.OnyTor_scaffold_12578          C 0 C 0
s Pan_paniscus.CM003386.1                           127570815 34 - 205426864 TGAATT------C-TC---Tatc-tc--------------c-att-t--tc-t----ct--------------------cctcacc--cc
i Pan_paniscus.CM003386.1                           C 0 C 0
s Pan_troglodytes.CM009241.2                        120147962 34 - 196562556 tgaatt------C-TC---TATC-TC--------------C-ATT-T--TC-T----ct--------------------cctcacc--cc
i Pan_troglodytes.CM009241.2                        I 29 I 7
s Papio_anubis.CM001492.2                           188151930 34 - 188283584 TGAATT------C-CC---TATC-TC--------------C-ATT-T--TC-C----Ct--------------------cctcacc--cc
i Papio_anubis.CM001492.2                           C 0 C 0
s Papio_cynocephalus.k141_386926                        48142 34 +     76494 tgaatt------c-cc---tatc-tc--------------c-att-t--tc-c----ct--------------------cctcacc--cc
i Papio_cynocephalus.k141_386926                    C 0 C 0
s Papio_hamadryas.Contig15                           47509326 34 +  47705337 tgaatt------c-cc---tatc-tc--------------c-att-t--tc-c----ct--------------------cctcacc--cc
i Papio_hamadryas.Contig15                          C 0 C 0
s Papio_kindae.k141_5458022                             63309 34 -    104429 tgaatt------c-cc---tatc-tc--------------c-att-t--tc-c----ct--------------------cctcacc--cc
i Papio_kindae.k141_5458022                         C 0 C 0
s Papio_papio.k141_3561084                              13093 34 -     29451 tgaatt------c-cc---tatc-tc--------------c-att-t--tc-c----ct--------------------cctcacc--cc
i Papio_papio.k141_3561084                          C 0 C 0
s Papio_ursinus.k141_3762866                            33498 34 +     35859 tgaatt------c-cc---tatc-tc--------------c-att-t--tc-c----ct--------------------cctcacc--cc
i Papio_ursinus.k141_3762866                        C 0 C 0
s Perodicticus_ibeanus.k141_117958                       1248 38 -     23713 tcacct------a-ca---tctc-tc--------------c-att-c--at-tggtcct--------------------tcccatc--ct
i Perodicticus_ibeanus.k141_117958                  C 0 C 0
s Perodicticus_potto.k141_713187                        20545 38 -     27972 tcacct------a-ca---tctc-tc--------------c-att-c--at-tggtcct--------------------tcccatc--ct
i Perodicticus_potto.k141_713187                    C 0 C 0
s Peromyscus_maniculatus.KI615518.1                   4946155 38 -   8017169 TTATCT------G-CA---TTTC-TC--------------TGCAT-C--AT-G----TT-----TT-G-AACCCTG---CC---------
i Peromyscus_maniculatus.KI615518.1                 C 0 C 0
s Piliocolobus_badius.k141_1497351                       1185 34 -      3310 tgaatt------c-cc---tatc-tc--------------c-att-t--tc-c----ct--------------------cctcacc--cc
i Piliocolobus_badius.k141_1497351                  C 0 C 0
s Piliocolobus_gordonorum.k141_902470                   21091 34 -     82327 tgaatt------c-cc---tatc-tc--------------c-att-t--tc-c----ct--------------------cctcacc--cc
i Piliocolobus_gordonorum.k141_902470               C 0 C 0
s Piliocolobus_kirkii.k141_557609                       17842 34 +     19957 tgaatt------c-cc---tatc-tc--------------c-att-t--tc-c----ct--------------------cctcacc--cc
i Piliocolobus_kirkii.k141_557609                   C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1           26735851 34 +  26888534 tgaatt------c-cc---tatc-tc--------------c-att-t--tc-C----Ct--------------------cctcacc--cc
i Piliocolobus_tephrosceles.PDMG02000036.1          C 0 C 0
s Pithecia_albicans.k141_991845                         39726 34 -     61926 tgaatt------c-tt---tctc-tc--------------c-att-t--tc-t----ct--------------------ctgcatc--cc
i Pithecia_albicans.k141_991845                     C 0 C 0
s Pithecia_chrysocephala.k141_159118                    21155 34 +     78826 tgaatt------c-tt---tctc-tc--------------c-att-t--tc-t----ct--------------------ccgcatc--cc
i Pithecia_chrysocephala.k141_159118                C 0 C 0
s Pithecia_hirsuta.k141_1152968                          5106 34 -     15800 tgaatt------c-tt---tctc-tc--------------c-att-t--tc-t----ct--------------------ccgcatc--cc
i Pithecia_hirsuta.k141_1152968                     C 0 C 0
s Pithecia_mittermeieri.k141_2119203                     8304 34 -     16101 tgaatt------c-tt---tctc-tc--------------c-att-t--tc-t----ct--------------------ccgcatc--cc
i Pithecia_mittermeieri.k141_2119203                C 0 C 0
s Pithecia_pissinattii.k141_1102319                      1613 34 +      9673 tgaatt------c-tt---tctc-tc--------------c-att-t--tc-t----ct--------------------ccgcatc--cc
i Pithecia_pissinattii.k141_1102319                 C 0 C 0
s Pithecia_pithecia.tarseq_313                       13470607 34 -  19735023 tgaatt------c-tt---tctc-tc--------------c-att-t--tc-t----ct--------------------ccgcatc--cc
i Pithecia_pithecia.tarseq_313                      C 0 C 0
s Pithecia_vanzolinii.k141_831006                        9515 34 -     31692 tgaatt------c-tt---tctc-tc--------------c-att-t--tc-t----ct--------------------ccgcatc--cc
i Pithecia_vanzolinii.k141_831006                   C 0 C 0
s Plecturocebus_bernhardi.k141_959214                   18879 34 +     44506 tgaatt------c-tt---tctc-tc--------------c-att-t--tc-t----ct--------------------cctcacc--cc
i Plecturocebus_bernhardi.k141_959214               C 0 C 0
s Plecturocebus_brunneus.k141_498086                    19097 34 +     67491 tgaatt------c-tt---tctc-tc--------------c-att-t--tc-t----ct--------------------cctcacc--cc
i Plecturocebus_brunneus.k141_498086                C 0 C 0
s Plecturocebus_caligatus.k141_2539816                   9342 34 -     98129 tgaatt------c-tt---tctc-tc--------------c-att-t--tc-t----ct--------------------cctcacc--cc
i Plecturocebus_caligatus.k141_2539816              C 0 C 0
s Plecturocebus_cinerascens.k141_744510                 18942 34 +    147771 tgaatt------c-tt---tctc-tc--------------c-att-t--tc-t----ct--------------------cctcacc--cc
i Plecturocebus_cinerascens.k141_744510             C 0 C 0
s Plecturocebus_cupreus.k141_1223294                    19193 34 -     23762 tgaatt------c-tt---tctc-tc--------------c-att-t--tc-t----ct--------------------cctcacc--cc
i Plecturocebus_cupreus.k141_1223294                C 0 C 0
s Plecturocebus_dubius.k141_2078842                     19141 34 -     19696 tgaatt------c-tt---tctc-tc--------------c-att-t--tc-t----ct--------------------cctcacc--cc
i Plecturocebus_dubius.k141_2078842                 C 0 C 0
s Plecturocebus_grovesi.k141_242819                     19015 34 +    152463 tgaatt------c-tt---tctc-tc--------------c-att-t--tc-t----ct--------------------cctcacc--cc
i Plecturocebus_grovesi.k141_242819                 C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                  5772 34 +      8943 tgaatt------c-tt---tctc-tc--------------c-att-t--tc-t----ct--------------------cctcacc--cc
i Plecturocebus_hoffmannsi.k141_1595076             C 0 C 0
s Plecturocebus_miltoni.k141_841561                      8732 34 +    134592 tgaatt------c-tt---tctc-tc--------------c-att-t--tc-t----ct--------------------cctcacc--cc
i Plecturocebus_miltoni.k141_841561                 C 0 C 0
s Plecturocebus_moloch.k141_890597                      19325 34 -     75465 tgaatt------c-tt---tctc-tc--------------c-att-t--tc-t----ct--------------------cctcacc--cc
i Plecturocebus_moloch.k141_890597                  C 0 C 0
s Pongo_abelii.NDHI03003816.1                          183368 34 -    373494 TGAATT------C-TC---TAtc-tc--------------c-att-t--tc-t----ct--------------------cctcacc--ct
i Pongo_abelii.NDHI03003816.1                       C 0 C 0
s Pongo_pygmaeus.ctg62                               19803271 34 +  19899266 tgaatt------c-tc---tatc-tc--------------c-att-t--tc-t----ct--------------------cctcacc--ct
i Pongo_pygmaeus.ctg62                              C 0 C 0
s Presbytis_comata.k141_672698                           1421 34 -     15069 tgaatt------c-cc---tatc-tc--------------c-att-t--tc-c----cg--------------------cctcacc--cc
i Presbytis_comata.k141_672698                      C 0 C 0
s Presbytis_mitrata.k141_860013                          1555 34 +     14865 tgaatt------c-cc---tatc-tc--------------c-att-t--tc-c----cg--------------------cctcacc--cc
i Presbytis_mitrata.k141_860013                     C 0 C 0
s Prolemur_simus.MPIZ01000048.1                       6844766 28 +  12164890 TAACCT------A-CA---TCTC-TC--------------C-ATG-T---C-T----TG--------------------CCTC-------
i Prolemur_simus.MPIZ01000048.1                     C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                664046 29 -   2312742 TAACCT------aaca---tctc-tc--------------c-att-t---c-t----tg--------------------CCTC-------
i Propithecus_coquerelli.NW_012147997.1             C 0 I 91
s Propithecus_coronatus.k141_844990                     30798 25 +     30823 taacct------aaca---tctc-tc--------------c-att-t---c-T----TG-------------------------------
i Propithecus_coronatus.k141_844990                 C 0 N 0
s Propithecus_diadema.k141_577245                       39235 29 +     52369 taacct------aaca---tctc-tc--------------c-att-t---c-t----tg--------------------tctc-------
i Propithecus_diadema.k141_577245                   C 0 C 0
s Propithecus_edwardsi.k141_1317105                     31624 29 -     44753 taacct------aaca---tctc-tc--------------c-att-t---c-t----tg--------------------tctc-------
i Propithecus_edwardsi.k141_1317105                 C 0 C 0
s Propithecus_perrieri.k141_7554                        13546 29 +     27322 taacct------aaca---tctc-tc--------------c-att-t---c-t----tg--------------------tctc-------
i Propithecus_perrieri.k141_7554                    C 0 C 0
s Propithecus_tattersalli.k141_907138                   13190 29 -     53241 taacct------aaca---tctc-tc--------------c-att-t---c-t----tg--------------------tctc-------
i Propithecus_tattersalli.k141_907138               C 0 C 0
s Propithecus_verreauxi.k141_158021                     35461 29 -     48185 taacct------aaca---tctc-tc--------------c-att-t---c-t----tg--------------------cctc-------
i Propithecus_verreauxi.k141_158021                 C 0 C 0
s Psammomys_obesus.NESX01026517.1                       28984 23 +     77221 tcatct------g-ca---tttc-ca--------------tgact-t--at---------------------------------------
i Psammomys_obesus.NESX01026517.1                   C 0 I 15
s Pygathrix_cinerea.k141_374971                         25546 34 +     56732 tgaatt------c-cc---tatc-tc--------------c-att-t--tc-c----cg--------------------cctcacc--ca
i Pygathrix_cinerea.k141_374971                     C 0 C 0
s Pygathrix_nigripes_b.ctg79                             6802036 34 +   6970761 tgaatt------c-cc---tatc-tc--------------c-att-t--tc-c----cg--------------------cctcacc--ca
i Pygathrix_nigripes_b.ctg79                           C 0 C 0
s Pygathrix_nigripes_a.k141_101123                         1428 34 +     18040 tgaatt------c-cc---tatc-tc--------------c-att-t--tc-c----cg--------------------cctcacc--ca
i Pygathrix_nigripes_a.k141_101123                    C 0 C 0
s Rattus_norvegicus.chr11                            13910928 24 +  90463843 CCACTT------G-TA---TCTCTCT--------------TGAGT-C--AT---------------------------------------
i Rattus_norvegicus.chr11                           C 0 I 14
s Rhinopithecus_bieti.k119_102124                       11983 34 -     14454 tgaatt------c-cc---tatc-tc--------------c-att-t--tc-c----cg--------------------cctcacc--cc
i Rhinopithecus_bieti.k119_102124                   C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1               206373309 34 - 206558726 tgaatt------c-cc---tatc-tc--------------c-att-t--tc-c----cG--------------------cctcacc--cc
i Rhinopithecus_roxellana.NC_044549.1               C 0 C 0
s Rhinopithecus_strykeri.ctg4                        44850957 34 -  45163003 tgaatt------c-cc---tatc-tc--------------c-att-t--tc-c----cg--------------------cctcacc--ct
i Rhinopithecus_strykeri.ctg4                       C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                 15668750 34 -  43202129 TGaatt------c-tt---tctc-tc--------------c-att-t--tc-t----ct--------------------cctcacc--cc
i Saimiri_boliviensis.NW_024100938.1                C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                     625 34 +     34089 tgaatt------c-tt---tctc-tc--------------c-att-t--tc-t----ct--------------------cctcacc--cc
i Saimiri_cassiquiarensis.k141_808270               C 0 C 0
s Saimiri_macrodon.k141_2087127                           556 34 -     60842 tgaatt------c-tt---tctc-tc--------------c-att-t--tc-t----ct--------------------cctcacc--cc
i Saimiri_macrodon.k141_2087127                     C 0 C 0
s Saimiri_oerstedii.k141_841116                           625 34 +     67014 tgaatt------c-tt---tctc-tc--------------c-att-t--tc-t----ct--------------------cctcacc--cc
i Saimiri_oerstedii.k141_841116                     C 0 C 0
s Saimiri_sciureus.k141_1947592                           625 34 +     60816 tgaatt------c-tt---tctc-tc--------------c-att-t--tc-t----ct--------------------cctcacc--cc
i Saimiri_sciureus.k141_1947592                     C 0 C 0
s Saimiri_ustus.k141_1282476                              553 34 -     76454 tgaatt------c-tt---tctc-tc--------------c-att-t--tc-t----ct--------------------cctcacc--cc
i Saimiri_ustus.k141_1282476                        C 0 C 0
s Sapajus_apella.ctg10                               17337133 34 -  30362882 tgaatt------c-tt---tctc-tc--------------c-att-t--tc-t----ct--------------------cctcacc--cc
i Sapajus_apella.ctg10                              C 0 C 0
s Sapajus_macrocephalus.k141_966464                     16734 34 -     62485 tgaatt------c-tt---tctc-tc--------------c-att-t--tc-t----ct--------------------cctcacc--cc
i Sapajus_macrocephalus.k141_966464                 C 0 C 0
s Semnopithecus_entellus.k141_1527475                   23971 34 +     26421 tgaatt------c-cc---tatc-tc--------------c-att-t--tt-c----ca--------------------cctcacc--cc
i Semnopithecus_entellus.k141_1527475               C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                   4433 34 +     20762 tgaatt------c-cc---tatc-tc--------------c-att-t--tt-c----cg--------------------cctcacc--cc
i Semnopithecus_hypoleucos.k141_761524              C 0 C 0
s Semnopithecus_johnii.k141_1351450                     38166 34 +     40653 tgaatt------c-cc---tatc-tc--------------c-att-t--tt-c----cg--------------------cctcacc--cc
i Semnopithecus_johnii.k141_1351450                 C 0 C 0
s Semnopithecus_priam.k141_198153                        8725 34 -     12194 tgaatt------c-cc---tatc-tc--------------c-att-t--tt-c----cg--------------------cctcacc--cc
i Semnopithecus_priam.k141_198153                   C 0 C 0
s Semnopithecus_schistaceus.k141_653647                 22144 34 -     27512 tgaatt------c-cc---tatc-tc--------------c-att-t--tt-c----cg--------------------cctcacc--cc
i Semnopithecus_schistaceus.k141_653647             C 0 C 0
s Semnopithecus_vetulus.k141_642050                     31165 34 -     33692 tgaatt------c-cc---tatc-tc--------------c-att-t--tt-c----cg--------------------cctcacc--cc
i Semnopithecus_vetulus.k141_642050                 C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332               94241 22 -    120886 TTAGTT------G-CA---TT-C-CC--------------TATAT-T--AT---------------------------------------
i Sigmodon_hispidus.SigHis_scaffold_11332           C 0 I 13
s Spermophilus_dauricus.KZ294190.1                    2236105 18 +   2842873 tgacct------g-ca---tcga-tc--------------c-at----------------------------------------------
i Spermophilus_dauricus.KZ294190.1                  C 0 I 13
s Symphalangus_syndactylus.tarseq_24                 13898095 34 +  13920577 tgaatt------c-tc---tgtc-tc--------------c-att-t--tc-t----ct--------------------cctcacc--cc
i Symphalangus_syndactylus.tarseq_24                C 0 C 0
s Tarsius_lariang.k141_609102                           22880 36 +     42269 tgacct------a-ca---tccc-cc--------------c-agt-t--cc-t----ct--------------------tccccttatcc
i Tarsius_lariang.k141_609102                       C 0 C 0
s Tarsius_wallacei.k141_48636                           56188 36 +     65473 tgacct------a-ca---tccc-cc--------------c-agt-t--cc-t----ct--------------------tccccttatcc
i Tarsius_wallacei.k141_48636                       C 0 C 0
s Theropithecus_gelada.CM009951.1                   194003465 34 - 194193292 TGAATT------C-CC---TATC-TC--------------C-ATT-T--TC-C----Ct--------------------cctcacc--cc
i Theropithecus_gelada.CM009951.1                   C 0 C 0
s Trachypithecus_auratus.k141_738098                    22543 34 +     38948 tgaatt------c-cc---tatc-tc--------------c-att-t--tt-c----cg--------------------cctcacc--cc
i Trachypithecus_auratus.k141_738098                C 0 C 0
s Trachypithecus_crepusculus.k141_1588528               16270 34 -     32910 tgaatt------c-cc---tatc-tc--------------c-att-t--tt-c----tg--------------------cctcacc--cc
i Trachypithecus_crepusculus.k141_1588528           C 0 C 0
s Trachypithecus_cristatus.k141_27198                   22168 34 +     24652 tgaatt------c-cc---tatc-tc--------------c-att-t--tt-c----cg--------------------cctcacc--cc
i Trachypithecus_cristatus.k141_27198               C 0 C 0
s Trachypithecus_francoisi.k141_1178450                  1053 34 -      3559 tgaatt------c-cc---tatc-tc--------------c-att-t--tt-c----cg--------------------cctcacc--cc
i Trachypithecus_francoisi.k141_1178450             C 0 C 0
s Trachypithecus_geei.k141_670367                       38992 34 -     54611 tgaatt------c-cc---tatc-tc--------------c-att-t--tt-c----cg--------------------cctcacc--cc
i Trachypithecus_geei.k141_670367                   C 0 C 0
s Trachypithecus_germaini.k141_809503                   14991 34 +     17312 tgaatt------c-cc---tatc-tc--------------c-att-t--tt-c----cg--------------------cctcacc--cc
i Trachypithecus_germaini.k141_809503               C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                22361 34 -     25040 tgaatt------c-cc---tatc-tc--------------c-att-t--tt-c----cg--------------------cctcacc--cc
i Trachypithecus_hatinhensis.k141_357672            C 0 C 0
s Trachypithecus_laotum.k141_171445                      1027 34 +      3528 tgaatt------c-cc---tatc-tc--------------c-att-t--tt-c----cg--------------------cctcacc--cc
i Trachypithecus_laotum.k141_171445                 C 0 C 0
s Trachypithecus_leucocephalus.k141_283605              47389 34 +     51589 tgaatt------c-cc---tatc-tc--------------c-att-t--tt-c----cg--------------------cctcacc--cc
i Trachypithecus_leucocephalus.k141_283605          C 0 C 0
s Trachypithecus_melamera.k141_238507                   10557 34 +     14732 tgaatt------c-cc---tatc-tc--------------c-att-t--tt-c----cg--------------------cctcacc--cc
i Trachypithecus_melamera.k141_238507               C 0 C 0
s Trachypithecus_obscurus.k141_1115109                   1035 34 -     28054 tgaatt------c-cc---tatc-tc--------------c-att-t--tt-c----tg--------------------cctcacc--cc
i Trachypithecus_obscurus.k141_1115109              C 0 C 0
s Trachypithecus_phayrei.ctg3                        44655830 34 -  44834318 tgaatt------c-cc---tatc-tc--------------c-att-t--tt-c----tg--------------------cctcacc--cc
i Trachypithecus_phayrei.ctg3                       C 0 C 0
s Trachypithecus_pileatus.k141_469329                     840 34 +      3372 tgaatt------c-cc---tatc-tc--------------c-att-t--tt-c----cg--------------------cctcacc--cc
i Trachypithecus_pileatus.k141_469329               C 0 C 0
s Tupaia_chinensis.KB320831.1                         2787051 18 -   3938065 -------------------tctt-cc--------------c-att-t--tc-t----cc--------------------tc---------
i Tupaia_chinensis.KB320831.1                       I 9 C 0
s Tupaia_tana.TupTan_flattened_line_3657864                29 30 +       342 tgacta------a-caccttctt-cc--------------c-att-t--tc-t----cc--------------------tc---------
i Tupaia_tana.TupTan_flattened_line_3657864         C 0 C 0
s Varecia_rubra.k141_432109                              1712 28 -     20643 taacct------a-ca---tctc-tc--------------c-atg-t---t-t----tg--------------------cctc-------
i Varecia_rubra.k141_432109                         C 0 C 0
s Varecia_variegata.k141_775891                         21257 28 -     33872 taacct------a-ca---tctc-tc--------------c-atg-t---t-t----tg--------------------cctc-------
i Varecia_variegata.k141_775891                     C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                   123287 40 -    134049 tggcct------g-ca---tctg-tc--------------t-att-t--cc-t----cctac-tcT-G-T-CCTTG---TA---------
i Xerus_inauris.XerIna_scaffold_7898                C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                 12070 37 -     20485 GTACTT------G-GA---TGTT-TC--------------C-TTT-T--CA-T----CC--T-CCC-C-A-CAT-G---TA---------
i Zapus_hudsonius.ZapHud_scaffold_64392             C 0 I 1
e Hylobates_pileatus_b.LG03                                 92553610  0 - 189753342 C
e Otolemur_garnettii.GL873528.1                      18004869 68 -  38779656 I
e Otolemur_crassicaudatus.k141_321880                   35431 68 +     38679 I
e Galagoides_demidoff.k141_1769638                       6763 68 +     27357 I
e Galago_senegalensis.k141_964197                        9743 68 -     43889 I
e Galago_moholi.ctg555                                 207363 68 -    847004 I
e Nomascus_siki_b.tarseq_80                         20456  0 -  18771707 C
e Nomascus_annamensis.k141_745421                         374  0 -      4569 C
e Nomascus_gabriellae.k141_1350167                        785  0 +      9928 C

a score=0.000000
s hg38.chr4_GL000008v2_random                            8115  7 +    209709 c-agccc------------c
s Acomys_cahirinus.AcoCah_scaffold_1625                108511  2 -    189883 ------C------------C
i Acomys_cahirinus.AcoCah_scaffold_1625             I 14 C 0
s Allactaga_bullata.AllBul_scaffold_70162                8800  2 -     22067 ------T------------C
i Allactaga_bullata.AllBul_scaffold_70162           I 1 C 0
s Allenopithecus_nigroviridis.k141_3103707              59137  7 +     61638 c-agcca------------c
i Allenopithecus_nigroviridis.k141_3103707          C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                    50945  7 +     53391 c-agccc------------c
i Allochrocebus_lhoesti.k141_4825038                C 0 C 0
s Allochrocebus_preussi.k141_1202907                     1669  7 +     72529 c-agccc------------c
i Allochrocebus_preussi.k141_1202907                C 0 C 0
s Allochrocebus_solatus.k141_787528                      1246  6 +      3797 c--gccc------------c
i Allochrocebus_solatus.k141_787528                 C 0 C 0
s Alouatta_belzebul.k141_1818029                         6330  7 -     18050 c-agccc------------c
i Alouatta_belzebul.k141_1818029                    C 0 C 0
s Alouatta_caraya.k141_5460                              7447  7 -     11521 c-agccc------------c
i Alouatta_caraya.k141_5460                         C 0 C 0
s Alouatta_discolor.k141_811576                          7005  7 -     21359 c-agccc------------c
i Alouatta_discolor.k141_811576                     C 0 C 0
s Alouatta_juara.k141_1856473                            5388  7 +      7227 c-agccc------------c
i Alouatta_juara.k141_1856473                       C 0 C 0
s Alouatta_macconnelli.k141_1331706                      6303  7 -     10438 c-agcct------------c
i Alouatta_macconnelli.k141_1331706                 C 0 C 0
s Alouatta_nigerrima.k141_2718643                        2957  7 +      7047 c-agccc------------c
i Alouatta_nigerrima.k141_2718643                   C 0 C 0
s Alouatta_palliata.k141_1316127                         6241  7 +     10410 c-agccg------------c
i Alouatta_palliata.k141_1316127                    C 0 C 0
s Alouatta_puruensis.k141_390786                         7518  7 -      7615 c-agccc------------c
i Alouatta_puruensis.k141_390786                    C 0 C 0
s Alouatta_seniculus.k141_990213                         2962  7 +      6429 c-agccc------------c
i Alouatta_seniculus.k141_990213                    C 0 C 0
s Aotus_azarae.k141_3170768                             58646  7 +     78111 c-agccc------------c
i Aotus_azarae.k141_3170768                         C 0 C 0
s Aotus_griseimembra.k141_3275623                        1577  7 +     22701 c-agccc------------c
i Aotus_griseimembra.k141_3275623                   C 0 C 0
s Aotus_nancymaae.KZ196176.1                          5745537  7 +   9889416 c-agccc------------c
i Aotus_nancymaae.KZ196176.1                        C 0 C 0
s Aotus_trivirgatus.k141_1740727                         2129  7 -    104377 c-agccc------------c
i Aotus_trivirgatus.k141_1740727                    C 0 C 0
s Aotus_vociferans.k141_718647                           2129  7 +     23246 c-agccc------------c
i Aotus_vociferans.k141_718647                      C 0 C 0
s Arctocebus_calabarensis.k141_1161114                  14438  7 +     17483 g-atcca------------c
i Arctocebus_calabarensis.k141_1161114              C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                         9535390  7 +  39197703 c-agccc------------c
i Ateles_geoffroyi_b.tarseq_2582                       C 0 C 0
s Ateles_belzebuth.k141_1348307                         56678  7 +     85812 c-agccc------------c
i Ateles_belzebuth.k141_1348307                     C 0 C 0
s Ateles_chamek.k141_1072810                             7675  7 +     89302 c-agccc------------c
i Ateles_chamek.k141_1072810                        C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                         12184  7 -     58268 c-agccc------------c
i Ateles_geoffroyi_a.k141_1300742                     C 0 C 0
s Ateles_marginatus.k141_899112                         60172  7 +    119057 c-agccc------------c
i Ateles_marginatus.k141_899112                     C 0 C 0
s Ateles_paniscus.k141_1631200                           2123  7 -     25888 c-agccc------------c
i Ateles_paniscus.k141_1631200                      C 0 C 0
s Avahi_laniger.k141_2840928                             2984  7 -     16375 t-ggcat------------c
i Avahi_laniger.k141_2840928                        C 0 C 0
s Avahi_peyrierasi.k141_767228                           8957  7 -      9688 t-ggcat------------c
i Avahi_peyrierasi.k141_767228                      C 0 C 0
s Cacajao_ayresi.k141_724503                           110047  7 -    171031 c-agccc------------c
i Cacajao_ayresi.k141_724503                        C 0 C 0
s Cacajao_calvus.k141_96166                              9073  7 +    125063 c-agccc------------c
i Cacajao_calvus.k141_96166                         C 0 C 0
s Cacajao_hosomi.k141_303789                            11121  7 -    216513 c-agccc------------c
i Cacajao_hosomi.k141_303789                        C 0 C 0
s Cacajao_melanocephalus.k141_1160263                    3660  7 -    134917 c-agccc------------c
i Cacajao_melanocephalus.k141_1160263               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_647363               682  3 +      1887 ------C-----------TC
i Capromys_pilorides.CapPil_scaffold_647363         C 0 C 0
s Carlito_syrichta.NW_007248099.1                      305431  7 +    345090 C-AGGtc------------c
i Carlito_syrichta.NW_007248099.1                   C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037               26982  2 +     33760 ------c------------c
i Castor_canadensis.CasCan_scaffold_47037           C 0 C 0
s Cavia_aperea.AVPZ01000278.1                        15783826  2 -  24422027 ------C------------C
i Cavia_aperea.AVPZ01000278.1                       C 0 I 1
s Cavia_porcellus.DS562889.1                         15795760  2 -  24440124 ------C------------C
i Cavia_porcellus.DS562889.1                        C 0 I 1
s Cavia_tschudii.CavTsc_scaffold_488                   173951  2 +    436027 ------C------------C
i Cavia_tschudii.CavTsc_scaffold_488                C 0 I 1
s Cebus_albifrons.Contig22                           18886858  7 -  29618158 c-agccc------------c
i Cebus_albifrons.Contig22                          C 0 C 0
s Cebus_olivaceus.k141_93739                             4404  7 -     26817 c-agccc------------c
i Cebus_olivaceus.k141_93739                        C 0 C 0
s Cebus_unicolor.k141_239009                             8644  7 +     25043 c-agccc------------c
i Cebus_unicolor.k141_239009                        C 0 C 0
s Cephalopachus_bancanus.k141_702587                     4467  7 +     21754 c-aggtc------------c
i Cephalopachus_bancanus.k141_702587                C 0 C 0
s Cercocebus_atys.KQ010443.1                          6550933  7 +   6739814 c-agccc------------c
i Cercocebus_atys.KQ010443.1                        C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                  52410  7 -     54931 c-agccc------------c
i Cercocebus_chrysogaster.k141_2951608              C 0 C 0
s Cercocebus_lunulatus.k141_3387186                     17394  7 -     19697 c-agccc------------c
i Cercocebus_lunulatus.k141_3387186                 C 0 C 0
s Cercocebus_torquatus.k141_3969582                     54925  7 -    107033 c-agccc------------c
i Cercocebus_torquatus.k141_3969582                 C 0 C 0
s Cercopithecus_ascanius.k141_3371259                    1368  7 -      3853 c-agccc------------c
i Cercopithecus_ascanius.k141_3371259               C 0 C 0
s Cercopithecus_cephus.k141_598190                      25300  7 +     30494 c-agccc------------c
i Cercopithecus_cephus.k141_598190                  C 0 C 0
s Cercopithecus_diana.k141_1490386                       1323  7 -      4022 c-agccc------------c
i Cercopithecus_diana.k141_1490386                  C 0 C 0
s Cercopithecus_hamlyni.k141_381099                      1213  7 -      3505 c-agccc------------c
i Cercopithecus_hamlyni.k141_381099                 C 0 C 0
s Cercopithecus_lowei.k141_623764                       20024  7 +     35983 c-agccc------------c
i Cercopithecus_lowei.k141_623764                   C 0 C 0
s Cercopithecus_albogularis.ctg51                          11985800  7 +  12117833 c-agccc------------c
i Cercopithecus_albogularis.ctg51                         C 0 C 0
s Cercopithecus_mona.ctg12                           46473296  7 +  46592721 c-agccc------------c
i Cercopithecus_mona.ctg12                          C 0 C 0
s Cercopithecus_neglectus.k141_1474992                  31123  7 +     33420 c-agccc------------c
i Cercopithecus_neglectus.k141_1474992              C 0 C 0
s Cercopithecus_nictitans.k141_675209                    1159  7 -      3443 c-agccc------------c
i Cercopithecus_nictitans.k141_675209               C 0 C 0
s Cercopithecus_petaurista.k141_2037881                  2150  7 -      4669 c-agccc------------c
i Cercopithecus_petaurista.k141_2037881             C 0 C 0
s Cercopithecus_pogonias.k141_1977419                    1954  7 -      4411 c-agccc------------c
i Cercopithecus_pogonias.k141_1977419               C 0 C 0
s Cercopithecus_roloway.k141_3372345                     1474  7 -      4205 c-agccc------------c
i Cercopithecus_roloway.k141_3372345                C 0 C 0
s Cheirogaleus_major.k141_1157592                       55320  7 -     68416 t-ggccc------------c
i Cheirogaleus_major.k141_1157592                   C 0 C 0
s Cheirogaleus_medius.k141_133808                        4370  7 +     13308 t-ggccc------------c
i Cheirogaleus_medius.k141_133808                   C 0 C 0
s Cheracebus_lucifer.k141_619653                         1657  7 -     18223 c-agccc------------c
i Cheracebus_lucifer.k141_619653                    C 0 C 0
s Cheracebus_lugens.k141_203936                         18680  7 +     25473 c-agccc------------c
i Cheracebus_lugens.k141_203936                     C 0 C 0
s Cheracebus_regulus.k141_2128895                       37719  7 +     57117 c-agccc------------c
i Cheracebus_regulus.k141_2128895                   C 0 C 0
s Cheracebus_torquatus.k141_315545                      42394  7 +     54541 c-agccc------------c
i Cheracebus_torquatus.k141_315545                  C 0 C 0
s Chinchilla_lanigera.JH721867.1                     15957839  2 +  43084221 ------c------------c
i Chinchilla_lanigera.JH721867.1                    C 0 I 1
s Chiropotes_israelita.k141_1189915                     67268  7 +    196370 c-agccc------------c
i Chiropotes_israelita.k141_1189915                 C 0 C 0
s Chiropotes_sagulatus.k141_773804                      11442  7 +     40510 c-agccc------------c
i Chiropotes_sagulatus.k141_773804                  C 0 C 0
s Chlorocebus_aethiops.ctg22                         15134754  7 -  15256731 c-agccc------------c
i Chlorocebus_aethiops.ctg22                        C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                  29800  7 -     53260 c-agccc------------c
i Chlorocebus_pygerythrus.k141_1486215              C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                    101140248  7 + 101219884 c-agccc------------c
i Chlorocebus_sabaeus.CM001963.2                    C 0 C 0
s Colobus_angolensis.KN985967.1                      10878830  7 +  10971483 c-agccc------------c
i Colobus_angolensis.KN985967.1                     C 0 C 0
s Colobus_guereza.LG08                              147659989  7 + 156195979 c-agccc------------c
i Colobus_guereza.LG08                              C 0 C 0
s Colobus_polykomos.k141_1406057                        11974  7 +     23629 c-agccc------------c
i Colobus_polykomos.k141_1406057                    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949             273949  2 -    399297 ------c------------c
i Cricetomys_gambianus.CriGam_scaffold_949          C 0 C 0
s Cricetulus_griseus.LT883672.1                      53025424  2 +  72327488 ------C------------C
i Cricetulus_griseus.LT883672.1                     C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447              204663  2 -    956709 ------C------------C
i Ctenodactylus_gundi.CteGun_scaffold_447           C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489             26843  3 -     67205 ------T-----------TT
i Ctenomys_sociabilis.CteSoc_scaffold_19489         C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637            14609  2 +     26546 ------c------------c
i Cuniculus_paca.CunPac_flattened_line_16637        C 0 I 1
s Dasyprocta_punctata.DasPun_flattened_line_634         56082  2 -    236241 ------c------------c
i Dasyprocta_punctata.DasPun_flattened_line_634     C 0 I 1
s Daubentonia_madagascariensis.ctg11                 16841194  7 +  31942871 t-ggcac------------c
i Daubentonia_madagascariensis.ctg11                I 4 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102            33338  2 -     73477 ------C------------C
i Dolichotis_patagonum.DolPat_scaffold_14102        C 0 I 1
s Ellobius_lutescens.LOEQ01003611.1                    235611  2 -    369425 ------C------------C
i Ellobius_lutescens.LOEQ01003611.1                 C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                       2621  2 -      7838 ------C------------C
i Ellobius_talpinus.LOJH01090055.1                  C 0 C 0
s Erythrocebus_patas.Contig8                         48766933  7 -  48907691 c-agccc------------c
i Erythrocebus_patas.Contig8                        C 0 C 0
s Eulemur_albifrons.k141_715837                          1393  7 +     13586 t-gaccc------------c
i Eulemur_albifrons.k141_715837                     C 0 C 0
s Eulemur_collaris.k141_311830                           1330  7 -      6809 t-gaccc------------c
i Eulemur_collaris.k141_311830                      C 0 C 0
s Eulemur_coronatus.k141_3240342                         7800  7 +     36558 t-gaccc------------c
i Eulemur_coronatus.k141_3240342                    C 0 C 0
s Eulemur_flavifrons.k141_903901                         4117  7 +     60246 t-gaccc------------t
i Eulemur_flavifrons.k141_903901                    C 0 C 0
s Eulemur_fulvus.k141_653297                             7605  7 +    109717 t-gaccc------------c
i Eulemur_fulvus.k141_653297                        C 0 C 0
s Eulemur_macaco.k141_1341545                           11979  7 +     16540 t-gaccc------------t
i Eulemur_macaco.k141_1341545                       C 0 C 0
s Eulemur_mongoz.k141_825972                            12256  7 +     27497 t-gaccc------------c
i Eulemur_mongoz.k141_825972                        C 0 C 0
s Eulemur_rubriventer.k141_411740                       14712  7 +     26808 t-gaccc------------c
i Eulemur_rubriventer.k141_411740                   C 0 C 0
s Eulemur_rufus.k141_1620292                            29446  7 +     46535 t-gaccc------------c
i Eulemur_rufus.k141_1620292                        C 0 C 0
s Eulemur_sanfordi.k141_186399                          12169  7 -     29447 t-gaccc------------c
i Eulemur_sanfordi.k141_186399                      C 0 C 0
s Fukomys_damarensis.KN123630.1                      13889412  2 -  19261668 ------c------------a
i Fukomys_damarensis.KN123630.1                     C 0 I 2
s Galeopterus_variegatus.GalVar_scaffold_354           152638  2 +    324696 ------c------------c
i Galeopterus_variegatus.GalVar_scaffold_354        I 7 C 0
s Glis_glis.GliGli_scaffold_79770                        9083  2 -     18683 ------c------------c
i Glis_glis.GliGli_scaffold_79770                   C 0 C 0
s Gorilla_beringei.k141_111300                           1507  7 -     14630 c-agccc------------c
i Gorilla_beringei.k141_111300                      C 0 C 0
s Gorilla_gorilla.LT578340.1                        119648605  7 - 195582420 c-agccc------------c
i Gorilla_gorilla.LT578340.1                        C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493               73640  2 +    118900 ------C------------C
i Graphiurus_murinus.GraMur_scaffold_4493           C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                     1938  7 +      3980 t-ggtct------------c
i Hapalemur_alaotrensis.k141_1198205                C 0 C 0
s Hapalemur_gilberti.k141_97962                         24418  7 +     26611 t-ggtct------------c
i Hapalemur_gilberti.k141_97962                     C 0 C 0
s Hapalemur_griseus.k141_1387522                         1872  7 +     56096 t-ggtct------------c
i Hapalemur_griseus.k141_1387522                    C 0 C 0
s Hapalemur_meridionalis.k141_186231                    25145  7 -     42470 t-ggtct------------c
i Hapalemur_meridionalis.k141_186231                C 0 C 0
s Hapalemur_occidentalis.k141_797938                    41742  7 -     54384 t-ggtct------------c
i Hapalemur_occidentalis.k141_797938                C 0 C 0
s Heterocephalus_glaber.JH602058.1                    2547397  2 +  31725842 ------c------------c
i Heterocephalus_glaber.JH602058.1                  C 0 I 2
s Hoolock_leuconedys.ctg649                                98179  7 +    115816 c-agccc------------c
i Hoolock_leuconedys.ctg649                            C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       16274  2 -    119109 ------C------------C
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259   C 0 I 1
s Hylobates_abbotti.k141_493872                          1316  7 +      5897 c-agccc------------c
i Hylobates_abbotti.k141_493872                     C 0 C 0
s Hylobates_agilis.k141_282275                            529  7 +      1846 c-agccc------------c
i Hylobates_agilis.k141_282275                      C 0 C 0
s Hylobates_klossii.k141_466549                          7774  7 +     11537 c-agccc------------c
i Hylobates_klossii.k141_466549                     C 0 C 0
s Hylobates_muelleri.k141_1133650                         751  7 -      2775 c-agccc------------c
i Hylobates_muelleri.k141_1133650                   C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                 2501  1 +     22540 ------C-------------
i Hystrix_cristata.HysCri_scaffold_50788            C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1               7122210  2 +  13083262 ------c------------c
i Ictidomys_tridecemlineatus.JH393315.1             I 13 C 0
s Indri_indri.k141_3334527                               8382  7 +      9207 t-ggcac------------c
i Indri_indri.k141_3334527                          C 0 C 0
s Jaculus_jaculus.JH725517.1                          8561761  2 +  11848649 ------C------------C
i Jaculus_jaculus.JH725517.1                        I 1 C 0
s Lagothrix_lagothricha.k141_12968                      46233  7 -    147782 c-agccc------------c
i Lagothrix_lagothricha.k141_12968                  C 0 C 0
s Lemur_catta.scaffold_1                            258403421  7 - 285822530 t-ggtcc------------c
i Lemur_catta.scaffold_1                            C 0 C 0
s Lepilemur_ankaranensis.k141_884009                    20315  7 +     39228 c-tgatc------------c
i Lepilemur_ankaranensis.k141_884009                C 0 C 0
s Lepilemur_dorsalis.k141_134267                        49691  7 +     63517 t-ggacc------------c
i Lepilemur_dorsalis.k141_134267                    C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                    74911  7 +    116806 c-ggacc------------c
i Lepilemur_ruficaudatus.k141_617879                C 0 C 0
s Lepilemur_septentrionalis.k141_578524                 27951  7 -     33031 c-tgatc------------c
i Lepilemur_septentrionalis.k141_578524             C 0 C 0
s Lophocebus_aterrimus.ctg55                         19244019  7 +  19376315 c-agccc------------c
i Lophocebus_aterrimus.ctg55                        C 0 C 0
s Loris_lydekkerianus.k141_550999                        6933  7 +     84689 g-aaccg------------c
i Loris_lydekkerianus.k141_550999                   C 0 C 0
s Loris_tardigradus.ctg97                             3774692  7 +   6799190 g-aaccg------------c
i Loris_tardigradus.ctg97                           C 0 C 0
s Macaca_arctoides.k141_2201161                         15705  7 +     74745 c-agccc------------c
i Macaca_arctoides.k141_2201161                     C 0 C 0
s Macaca_assamensis.Contig65                         12702211  7 +  12821369 c-agccc------------c
i Macaca_assamensis.Contig65                        C 0 C 0
s Macaca_cyclopis.k119_1168412                           4304  7 +      6569 c-agccc------------c
i Macaca_cyclopis.k119_1168412                      C 0 C 0
s Macaca_fascicularis.k141_155037                       42604  7 +     63263 c-agccc------------c
i Macaca_fascicularis.k141_155037                   C 0 C 0
s Macaca_fuscata.k119_1068107                           11181  7 +     12679 c-agccc------------c
i Macaca_fuscata.k119_1068107                       C 0 C 0
s Macaca_leonina.k141_3421209                             754  7 +      3017 c-agccc------------c
i Macaca_leonina.k141_3421209                       C 0 C 0
s Macaca_maura.k141_251854                              42366  7 -     79256 c-agccc------------c
i Macaca_maura.k141_251854                          C 0 C 0
s Macaca_mulatta.NC_041755.1                        196031286  7 + 196197964 c-agccc------------c
i Macaca_mulatta.NC_041755.1                        C 0 C 0
s Macaca_nemestrina.KQ004885.1                       11441390  7 +  11645122 c-agccc------------c
i Macaca_nemestrina.KQ004885.1                      C 0 C 0
s Macaca_nigra.k141_282495                               1316  7 -     46448 c-agccc------------c
i Macaca_nigra.k141_282495                          C 0 C 0
s Macaca_radiata.k141_1580474                            1143  7 -      3617 c-agccc------------c
i Macaca_radiata.k141_1580474                       C 0 C 0
s Macaca_siberu.k141_741907                             11476  7 -     55006 c-agccc------------c
i Macaca_siberu.k141_741907                         C 0 C 0
s Macaca_silenus.Contig12                            43836515  7 +  43892939 c-agccc------------c
i Macaca_silenus.Contig12                           C 0 C 0
s Macaca_thibetana.k99_116940                            3738  7 -      5978 c-agccc------------c
i Macaca_thibetana.k99_116940                       C 0 C 0
s Macaca_tonkeana.k141_2870633                           1318  7 -     27140 c-agccc------------c
i Macaca_tonkeana.k141_2870633                      C 0 C 0
s Mandrillus_leucophaeus.scaffold125                 43433179  7 -  43563597 c-aggcc------------c
i Mandrillus_leucophaeus.scaffold125                C 0 C 0
s Mandrillus_sphinx.Contig144                         4446005  7 -   4543643 c-aggcc------------c
i Mandrillus_sphinx.Contig144                       C 0 C 0
s Marmota_marmota.CZRN01000005.1                     36870054  2 +  64221397 ------c------------c
i Marmota_marmota.CZRN01000005.1                    I 13 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233            7961  2 +     15977 ------C------------C
i Meriones_unguiculatus.MerUng_scaffold_52233       I 15 C 0
s Mesocricetus_auratus.KB708139.1                     1042906  2 -  26018355 ------c------------c
i Mesocricetus_auratus.KB708139.1                   C 0 C 0
s Microcebus_murinus.CM007691.1                      16506536  7 +  47401472 A-GGCCC------------C
i Microcebus_murinus.CM007691.1                     C 0 C 0
s Microtus_ochrogaster.CM001673.1                    22815272  2 -  98408828 ------T------------C
i Microtus_ochrogaster.CM001673.1                   C 0 C 0
s Miopithecus_ogouensis.k141_2666161                    31853  7 +     34273 c-agccc------------c
i Miopithecus_ogouensis.k141_2666161                C 0 C 0
s Mirza_zaza.k141_226143                                 1950  7 +      8497 t-ggccc------------c
i Mirza_zaza.k141_226143                            C 0 C 0
s Mus_caroli.LT608236.1                              70761426  2 +  92629107 ------C------------T
i Mus_caroli.LT608236.1                             C 0 C 0
s Mus_musculus.chr16                                 75484501  2 +  98207768 ------C------------T
i Mus_musculus.chr16                                C 0 C 0
s Mus_pahari.LT608305.1                              67549040  2 +  89017189 ------C------------T
i Mus_pahari.LT608305.1                             C 0 C 0
s Mus_spretus.CM004110.1                             74324139  2 +  97876770 ------C------------T
i Mus_spretus.CM004110.1                            C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643          6957  2 +     98495 ------c------------t
i Muscardinus_avellanarius.MusAve_scaffold_9643     C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                 86434  3 -    117718 ------C-----------TC
i Myocastor_coypus.MyoCoy_scaffold_3653             C 0 C 0
s Nannospalax_galili.KL201303.1                        107231  2 +    362372 ------c------------c
i Nannospalax_galili.KL201303.1                     C 0 C 0
s Nasalis_larvatus.k141_153429                           4218  7 +     48152 c-acccc------------c
i Nasalis_larvatus.k141_153429                      C 0 C 0
s Nycticebus_bengalensis.LG16                        65563281  7 -  95554990 g-aatca------------c
i Nycticebus_bengalensis.LG16                       C 0 C 0
s Nycticebus_coucang.k141_7268257                        2296  7 -      2537 g-aatca------------c
i Nycticebus_coucang.k141_7268257                   C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17  65665644  7 +  89412551 g-aatca------------c
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17 C 0 C 0
s Octodon_degus.JH651621.1                            3674972  3 +  10294119 ------T-----------TT
i Octodon_degus.JH651621.1                          C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821              121090  2 +    145789 ------C------------C
i Ondatra_zibethicus.OndZib_scaffold_6821           C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578              33031  2 +     62360 ------C------------C
i Onychomys_torridus.OnyTor_scaffold_12578          C 0 C 0
s Pan_paniscus.CM003386.1                           127570849  7 - 205426864 c-agccc------------c
i Pan_paniscus.CM003386.1                           C 0 C 0
s Pan_troglodytes.NBAG03004801.1                         1679  8 +      1858 ccagccc------------c
i Pan_troglodytes.NBAG03004801.1                    n 7 n 7
s Papio_anubis.CM001492.2                           188151964  7 - 188283584 c-agccc------------c
i Papio_anubis.CM001492.2                           C 0 C 0
s Papio_cynocephalus.k141_386926                        48176  7 +     76494 c-agccc------------c
i Papio_cynocephalus.k141_386926                    C 0 C 0
s Papio_hamadryas.Contig15                           47509360  7 +  47705337 c-agccc------------c
i Papio_hamadryas.Contig15                          C 0 C 0
s Papio_kindae.k141_5458022                             63343  7 -    104429 c-agccc------------c
i Papio_kindae.k141_5458022                         C 0 C 0
s Papio_papio.k141_3561084                              13127  7 -     29451 c-agccc------------c
i Papio_papio.k141_3561084                          C 0 C 0
s Papio_ursinus.k141_3762866                            33532  7 +     35859 c-agccc------------c
i Papio_ursinus.k141_3762866                        C 0 C 0
s Perodicticus_ibeanus.k141_117958                       1286  7 -     23713 g-accca------------c
i Perodicticus_ibeanus.k141_117958                  C 0 C 0
s Perodicticus_potto.k141_713187                        20583  7 -     27972 g-accca------------c
i Perodicticus_potto.k141_713187                    C 0 C 0
s Peromyscus_maniculatus.KI615518.1                   4946193  2 -   8017169 ------C------------C
i Peromyscus_maniculatus.KI615518.1                 C 0 C 0
s Piliocolobus_badius.k141_1497351                       1219  7 -      3310 c-agccc------------c
i Piliocolobus_badius.k141_1497351                  C 0 C 0
s Piliocolobus_gordonorum.k141_902470                   21125  7 -     82327 c-agccc------------c
i Piliocolobus_gordonorum.k141_902470               C 0 C 0
s Piliocolobus_kirkii.k141_557609                       17876  7 +     19957 c-agccc------------c
i Piliocolobus_kirkii.k141_557609                   C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1           26735885  7 +  26888534 c-agccc------------c
i Piliocolobus_tephrosceles.PDMG02000036.1          C 0 C 0
s Pithecia_albicans.k141_991845                         39760  7 -     61926 t-agccc------------c
i Pithecia_albicans.k141_991845                     C 0 C 0
s Pithecia_chrysocephala.k141_159118                    21189  7 +     78826 t-agccc------------c
i Pithecia_chrysocephala.k141_159118                C 0 C 0
s Pithecia_hirsuta.k141_1152968                          5140  7 -     15800 t-agccc------------c
i Pithecia_hirsuta.k141_1152968                     C 0 C 0
s Pithecia_mittermeieri.k141_2119203                     8338  7 -     16101 t-agccc------------c
i Pithecia_mittermeieri.k141_2119203                C 0 C 0
s Pithecia_pissinattii.k141_1102319                      1647  7 +      9673 t-agccc------------c
i Pithecia_pissinattii.k141_1102319                 C 0 C 0
s Pithecia_pithecia.tarseq_313                       13470641  7 -  19735023 t-agccc------------c
i Pithecia_pithecia.tarseq_313                      C 0 C 0
s Pithecia_vanzolinii.k141_831006                        9549  7 -     31692 t-agccc------------c
i Pithecia_vanzolinii.k141_831006                   C 0 C 0
s Plecturocebus_bernhardi.k141_959214                   18913  7 +     44506 c-agccc------------c
i Plecturocebus_bernhardi.k141_959214               C 0 C 0
s Plecturocebus_brunneus.k141_498086                    19131  7 +     67491 c-agccc------------c
i Plecturocebus_brunneus.k141_498086                C 0 C 0
s Plecturocebus_caligatus.k141_2539816                   9376  7 -     98129 c-agccc------------c
i Plecturocebus_caligatus.k141_2539816              C 0 C 0
s Plecturocebus_cinerascens.k141_744510                 18976  7 +    147771 c-agccc------------c
i Plecturocebus_cinerascens.k141_744510             C 0 C 0
s Plecturocebus_cupreus.k141_1223294                    19227  7 -     23762 c-agccc------------c
i Plecturocebus_cupreus.k141_1223294                C 0 C 0
s Plecturocebus_dubius.k141_2078842                     19175  7 -     19696 c-agccc------------c
i Plecturocebus_dubius.k141_2078842                 C 0 C 0
s Plecturocebus_grovesi.k141_242819                     19049  7 +    152463 c-agccc------------c
i Plecturocebus_grovesi.k141_242819                 C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                  5806  7 +      8943 c-agccc------------c
i Plecturocebus_hoffmannsi.k141_1595076             C 0 C 0
s Plecturocebus_miltoni.k141_841561                      8766  7 +    134592 c-agccc------------c
i Plecturocebus_miltoni.k141_841561                 C 0 C 0
s Plecturocebus_moloch.k141_890597                      19359  7 -     75465 c-agccc------------c
i Plecturocebus_moloch.k141_890597                  C 0 C 0
s Pongo_abelii.NDHI03003816.1                          183402  7 -    373494 c-agccc------------c
i Pongo_abelii.NDHI03003816.1                       C 0 C 0
s Pongo_pygmaeus.ctg62                               19803305  7 +  19899266 c-agccc------------c
i Pongo_pygmaeus.ctg62                              C 0 C 0
s Presbytis_comata.k141_672698                           1455  7 -     15069 c-agccc------------c
i Presbytis_comata.k141_672698                      C 0 C 0
s Presbytis_mitrata.k141_860013                          1589  7 +     14865 c-agccc------------c
i Presbytis_mitrata.k141_860013                     C 0 C 0
s Prolemur_simus.MPIZ01000048.1                       6844794  7 +  12164890 T-GGTCC------------C
i Prolemur_simus.MPIZ01000048.1                     C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                 13229  7 -     30946 T-GGCAC------------C
i Propithecus_coquerelli.NW_012147863.1             n 91 C 0
s Propithecus_diadema.k141_577245                       39264  7 +     52369 t-ggcac------------c
i Propithecus_diadema.k141_577245                   C 0 C 0
s Propithecus_edwardsi.k141_1317105                     31653  7 -     44753 t-ggcac------------c
i Propithecus_edwardsi.k141_1317105                 C 0 C 0
s Propithecus_perrieri.k141_7554                        13575  7 +     27322 t-ggcac------------c
i Propithecus_perrieri.k141_7554                    C 0 C 0
s Propithecus_tattersalli.k141_907138                   13219  7 -     53241 t-ggcac------------c
i Propithecus_tattersalli.k141_907138               C 0 C 0
s Propithecus_verreauxi.k141_158021                     35490  7 -     48185 t-ggcac------------c
i Propithecus_verreauxi.k141_158021                 C 0 C 0
s Psammomys_obesus.NESX01026517.1                       29022  2 +     77221 ------c------------c
i Psammomys_obesus.NESX01026517.1                   I 15 C 0
s Pygathrix_cinerea.k141_374971                         25580  7 +     56732 c-agccc------------c
i Pygathrix_cinerea.k141_374971                     C 0 C 0
s Pygathrix_nigripes_b.ctg79                             6802070  7 +   6970761 c-agccc------------c
i Pygathrix_nigripes_b.ctg79                           C 0 C 0
s Pygathrix_nigripes_a.k141_101123                         1462  7 +     18040 c-agccc------------c
i Pygathrix_nigripes_a.k141_101123                    C 0 C 0
s Rattus_norvegicus.chr11                            13910966  2 +  90463843 ------C------------C
i Rattus_norvegicus.chr11                           I 14 C 0
s Rhinopithecus_bieti.k119_102124                       12017  7 -     14454 c-agccc------------c
i Rhinopithecus_bieti.k119_102124                   C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1               206373343  7 - 206558726 c-agccc------------c
i Rhinopithecus_roxellana.NC_044549.1               C 0 C 0
s Rhinopithecus_strykeri.ctg4                        44850991  7 -  45163003 c-agccc------------c
i Rhinopithecus_strykeri.ctg4                       C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                 15668784  7 -  43202129 c-agccc------------c
i Saimiri_boliviensis.NW_024100938.1                C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                     659  7 +     34089 c-agccc------------c
i Saimiri_cassiquiarensis.k141_808270               C 0 C 0
s Saimiri_macrodon.k141_2087127                           590  7 -     60842 c-agccc------------c
i Saimiri_macrodon.k141_2087127                     C 0 C 0
s Saimiri_oerstedii.k141_841116                           659  7 +     67014 c-agccc------------c
i Saimiri_oerstedii.k141_841116                     C 0 C 0
s Saimiri_sciureus.k141_1947592                           659  7 +     60816 c-agccc------------c
i Saimiri_sciureus.k141_1947592                     C 0 C 0
s Saimiri_ustus.k141_1282476                              587  7 -     76454 c-agccc------------c
i Saimiri_ustus.k141_1282476                        C 0 C 0
s Sapajus_apella.ctg10                               17337167  7 -  30362882 c-agccc------------c
i Sapajus_apella.ctg10                              C 0 C 0
s Sapajus_macrocephalus.k141_966464                     16768  7 -     62485 c-agccc------------c
i Sapajus_macrocephalus.k141_966464                 C 0 C 0
s Semnopithecus_entellus.k141_1527475                   24005  7 +     26421 c-agccc------------c
i Semnopithecus_entellus.k141_1527475               C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                   4467  7 +     20762 c-agccc------------c
i Semnopithecus_hypoleucos.k141_761524              C 0 C 0
s Semnopithecus_johnii.k141_1351450                     38200  7 +     40653 c-agccc------------c
i Semnopithecus_johnii.k141_1351450                 C 0 C 0
s Semnopithecus_priam.k141_198153                        8759  7 -     12194 c-agccc------------c
i Semnopithecus_priam.k141_198153                   C 0 C 0
s Semnopithecus_schistaceus.k141_653647                 22178  7 -     27512 c-agccc------------c
i Semnopithecus_schistaceus.k141_653647             C 0 C 0
s Semnopithecus_vetulus.k141_642050                     31199  7 -     33692 c-agccc------------c
i Semnopithecus_vetulus.k141_642050                 C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332               94276  2 -    120886 ------C------------A
i Sigmodon_hispidus.SigHis_scaffold_11332           I 13 C 0
s Spermophilus_dauricus.KZ294190.1                    2236136  2 +   2842873 ------c------------c
i Spermophilus_dauricus.KZ294190.1                  I 13 C 0
s Symphalangus_syndactylus.tarseq_24                 13898129  7 +  13920577 c-agccc------------c
i Symphalangus_syndactylus.tarseq_24                C 0 C 0
s Tarsius_lariang.k141_609102                           22916  7 +     42269 c-aggtc------------c
i Tarsius_lariang.k141_609102                       C 0 C 0
s Tarsius_wallacei.k141_48636                           56224  7 +     65473 c-aggtc------------c
i Tarsius_wallacei.k141_48636                       C 0 C 0
s Theropithecus_gelada.CM009951.1                   194003499  7 - 194193292 c-agccc------------c
i Theropithecus_gelada.CM009951.1                   C 0 C 0
s Trachypithecus_auratus.k141_738098                    22577  7 +     38948 c-agccc------------c
i Trachypithecus_auratus.k141_738098                C 0 C 0
s Trachypithecus_crepusculus.k141_1588528               16304  7 -     32910 c-agccc------------c
i Trachypithecus_crepusculus.k141_1588528           C 0 C 0
s Trachypithecus_cristatus.k141_27198                   22202  7 +     24652 c-agccc------------c
i Trachypithecus_cristatus.k141_27198               C 0 C 0
s Trachypithecus_francoisi.k141_1178450                  1087  7 -      3559 c-agccc------------c
i Trachypithecus_francoisi.k141_1178450             C 0 C 0
s Trachypithecus_geei.k141_670367                       39026  7 -     54611 c-agccc------------c
i Trachypithecus_geei.k141_670367                   C 0 C 0
s Trachypithecus_germaini.k141_809503                   15025  7 +     17312 c-agccc------------c
i Trachypithecus_germaini.k141_809503               C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                22395  7 -     25040 c-agccc------------c
i Trachypithecus_hatinhensis.k141_357672            C 0 C 0
s Trachypithecus_laotum.k141_171445                      1061  7 +      3528 c-agccc------------c
i Trachypithecus_laotum.k141_171445                 C 0 C 0
s Trachypithecus_leucocephalus.k141_283605              47423  7 +     51589 c-agccc------------c
i Trachypithecus_leucocephalus.k141_283605          C 0 C 0
s Trachypithecus_melamera.k141_238507                   10591  7 +     14732 c-agccc------------c
i Trachypithecus_melamera.k141_238507               C 0 C 0
s Trachypithecus_obscurus.k141_1115109                   1069  7 -     28054 c-agccc------------c
i Trachypithecus_obscurus.k141_1115109              C 0 C 0
s Trachypithecus_phayrei.ctg3                        44655864  7 -  44834318 c-agccc------------c
i Trachypithecus_phayrei.ctg3                       C 0 C 0
s Trachypithecus_pileatus.k141_469329                     874  7 +      3372 c-agccc------------c
i Trachypithecus_pileatus.k141_469329               C 0 C 0
s Tupaia_chinensis.KB320831.1                         2787069 14 -   3938065 ------ccaacctctgcccc
i Tupaia_chinensis.KB320831.1                       C 0 C 0
s Tupaia_tana.TupTan_flattened_line_3657864                59 14 +       342 ------ccaacacctgcccc
i Tupaia_tana.TupTan_flattened_line_3657864         C 0 C 0
s Varecia_rubra.k141_432109                              1740  7 -     20643 t-ggccc------------c
i Varecia_rubra.k141_432109                         C 0 C 0
s Varecia_variegata.k141_775891                         21285  7 -     33872 t-ggccc------------c
i Varecia_variegata.k141_775891                     C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                   123327  2 -    134049 ------C------------C
i Xerus_inauris.XerIna_scaffold_7898                C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                 12108  2 -     20485 ------C------------c
i Zapus_hudsonius.ZapHud_scaffold_64392             I 1 I 63
e Hylobates_pileatus_b.LG03                                 92553610  0 - 189753342 C
e Otolemur_garnettii.GL873528.1                      18004869 68 -  38779656 I
e Otolemur_crassicaudatus.k141_321880                   35431 68 +     38679 I
e Galagoides_demidoff.k141_1769638                       6763 68 +     27357 I
e Galago_senegalensis.k141_964197                        9743 68 -     43889 I
e Galago_moholi.ctg555                                 207363 68 -    847004 I
e Nomascus_siki_b.tarseq_80                         20456  0 -  18771707 C
e Nomascus_annamensis.k141_745421                         374  0 -      4569 C
e Nomascus_gabriellae.k141_1350167                        785  0 +      9928 C

a score=0.000000
s hg38.chr4_GL000008v2_random                            8122 3 +    209709 tg--g
s Acomys_cahirinus.AcoCah_scaffold_1625                108513 3 -    189883 AG--A
i Acomys_cahirinus.AcoCah_scaffold_1625             C 0 I 9
s Allactaga_bullata.AllBul_scaffold_70162                8802 3 -     22067 TG--A
i Allactaga_bullata.AllBul_scaffold_70162           C 0 I 6
s Allenopithecus_nigroviridis.k141_3103707              59144 3 +     61638 tg--g
i Allenopithecus_nigroviridis.k141_3103707          C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                    50952 3 +     53391 tg--a
i Allochrocebus_lhoesti.k141_4825038                C 0 C 0
s Allochrocebus_preussi.k141_1202907                     1676 3 +     72529 tg--a
i Allochrocebus_preussi.k141_1202907                C 0 C 0
s Allochrocebus_solatus.k141_787528                      1252 3 +      3797 tg--a
i Allochrocebus_solatus.k141_787528                 C 0 C 0
s Alouatta_belzebul.k141_1818029                         6337 3 -     18050 tg--g
i Alouatta_belzebul.k141_1818029                    C 0 C 0
s Alouatta_caraya.k141_5460                              7454 3 -     11521 tg--g
i Alouatta_caraya.k141_5460                         C 0 C 0
s Alouatta_discolor.k141_811576                          7012 3 -     21359 tg--g
i Alouatta_discolor.k141_811576                     C 0 C 0
s Alouatta_juara.k141_1856473                            5395 3 +      7227 tg--g
i Alouatta_juara.k141_1856473                       C 0 C 0
s Alouatta_macconnelli.k141_1331706                      6310 3 -     10438 tg--g
i Alouatta_macconnelli.k141_1331706                 C 0 C 0
s Alouatta_nigerrima.k141_2718643                        2964 3 +      7047 tg--g
i Alouatta_nigerrima.k141_2718643                   C 0 C 0
s Alouatta_palliata.k141_1316127                         6248 3 +     10410 tg--g
i Alouatta_palliata.k141_1316127                    C 0 C 0
s Alouatta_puruensis.k141_390786                         7525 3 -      7615 tg--g
i Alouatta_puruensis.k141_390786                    C 0 C 0
s Alouatta_seniculus.k141_990213                         2969 3 +      6429 tg--g
i Alouatta_seniculus.k141_990213                    C 0 C 0
s Aotus_azarae.k141_3170768                             58653 3 +     78111 tg--g
i Aotus_azarae.k141_3170768                         C 0 C 0
s Aotus_griseimembra.k141_3275623                        1584 3 +     22701 tg--g
i Aotus_griseimembra.k141_3275623                   C 0 C 0
s Aotus_nancymaae.KZ196176.1                          5745544 3 +   9889416 tg--g
i Aotus_nancymaae.KZ196176.1                        C 0 C 0
s Aotus_trivirgatus.k141_1740727                         2136 3 -    104377 tg--g
i Aotus_trivirgatus.k141_1740727                    C 0 C 0
s Aotus_vociferans.k141_718647                           2136 3 +     23246 tg--g
i Aotus_vociferans.k141_718647                      C 0 C 0
s Arctocebus_calabarensis.k141_1161114                  14445 2 +     17483 tg---
i Arctocebus_calabarensis.k141_1161114              C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                         9535397 3 +  39197703 tg--g
i Ateles_geoffroyi_b.tarseq_2582                       C 0 C 0
s Ateles_belzebuth.k141_1348307                         56685 3 +     85812 tg--g
i Ateles_belzebuth.k141_1348307                     C 0 C 0
s Ateles_chamek.k141_1072810                             7682 3 +     89302 tg--g
i Ateles_chamek.k141_1072810                        C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                         12191 3 -     58268 tg--g
i Ateles_geoffroyi_a.k141_1300742                     C 0 C 0
s Ateles_marginatus.k141_899112                         60179 3 +    119057 tg--g
i Ateles_marginatus.k141_899112                     C 0 C 0
s Ateles_paniscus.k141_1631200                           2130 3 -     25888 tg--g
i Ateles_paniscus.k141_1631200                      C 0 C 0
s Avahi_laniger.k141_2840928                             2991 3 -     16375 tg--g
i Avahi_laniger.k141_2840928                        C 0 C 0
s Avahi_peyrierasi.k141_767228                           8964 3 -      9688 tg--g
i Avahi_peyrierasi.k141_767228                      C 0 C 0
s Cacajao_ayresi.k141_724503                           110054 3 -    171031 tg--g
i Cacajao_ayresi.k141_724503                        C 0 C 0
s Cacajao_calvus.k141_96166                              9080 3 +    125063 tg--g
i Cacajao_calvus.k141_96166                         C 0 C 0
s Cacajao_hosomi.k141_303789                            11128 3 -    216513 tg--g
i Cacajao_hosomi.k141_303789                        C 0 C 0
s Cacajao_melanocephalus.k141_1160263                    3667 3 -    134917 tg--g
i Cacajao_melanocephalus.k141_1160263               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_647363               685 1 +      1887 ----G
i Capromys_pilorides.CapPil_scaffold_647363         C 0 I 20
s Carlito_syrichta.NW_007248099.1                      305438 3 +    345090 tg--g
i Carlito_syrichta.NW_007248099.1                   C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037               26984 3 +     33760 tg--a
i Castor_canadensis.CasCan_scaffold_47037           C 0 C 0
s Cavia_aperea.AVPZ01000278.1                        15783829 1 -  24422027 ----G
i Cavia_aperea.AVPZ01000278.1                       I 1 C 0
s Cavia_porcellus.DS562889.1                         15795763 1 -  24440124 ----G
i Cavia_porcellus.DS562889.1                        I 1 I 18
s Cavia_tschudii.CavTsc_scaffold_488                   173954 1 +    436027 ----G
i Cavia_tschudii.CavTsc_scaffold_488                I 1 I 18
s Cebus_albifrons.Contig22                           18886865 3 -  29618158 tg--g
i Cebus_albifrons.Contig22                          C 0 C 0
s Cebus_olivaceus.k141_93739                             4411 3 -     26817 tg--g
i Cebus_olivaceus.k141_93739                        C 0 C 0
s Cebus_unicolor.k141_239009                             8651 3 +     25043 tg--g
i Cebus_unicolor.k141_239009                        C 0 C 0
s Cephalopachus_bancanus.k141_702587                     4474 3 +     21754 tg--g
i Cephalopachus_bancanus.k141_702587                C 0 C 0
s Cercocebus_atys.KQ010443.1                          6550940 3 +   6739814 tg--g
i Cercocebus_atys.KQ010443.1                        C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                  52417 3 -     54931 tg--g
i Cercocebus_chrysogaster.k141_2951608              C 0 C 0
s Cercocebus_lunulatus.k141_3387186                     17401 3 -     19697 tg--g
i Cercocebus_lunulatus.k141_3387186                 C 0 C 0
s Cercocebus_torquatus.k141_3969582                     54932 3 -    107033 tg--g
i Cercocebus_torquatus.k141_3969582                 C 0 C 0
s Cercopithecus_ascanius.k141_3371259                    1375 3 -      3853 tg--g
i Cercopithecus_ascanius.k141_3371259               C 0 C 0
s Cercopithecus_cephus.k141_598190                      25307 3 +     30494 ta--g
i Cercopithecus_cephus.k141_598190                  C 0 C 0
s Cercopithecus_diana.k141_1490386                       1330 3 -      4022 tg--a
i Cercopithecus_diana.k141_1490386                  C 0 C 0
s Cercopithecus_hamlyni.k141_381099                      1220 3 -      3505 tg--g
i Cercopithecus_hamlyni.k141_381099                 C 0 C 0
s Cercopithecus_lowei.k141_623764                       20031 3 +     35983 ta--g
i Cercopithecus_lowei.k141_623764                   C 0 C 0
s Cercopithecus_albogularis.ctg51                          11985807 3 +  12117833 ta--g
i Cercopithecus_albogularis.ctg51                         C 0 C 0
s Cercopithecus_mona.ctg12                           46473303 3 +  46592721 ta--g
i Cercopithecus_mona.ctg12                          C 0 C 0
s Cercopithecus_neglectus.k141_1474992                  31130 3 +     33420 tg--g
i Cercopithecus_neglectus.k141_1474992              C 0 C 0
s Cercopithecus_nictitans.k141_675209                    1166 3 -      3443 ta--g
i Cercopithecus_nictitans.k141_675209               C 0 C 0
s Cercopithecus_petaurista.k141_2037881                  2157 3 -      4669 tg--a
i Cercopithecus_petaurista.k141_2037881             C 0 C 0
s Cercopithecus_pogonias.k141_1977419                    1961 3 -      4411 tg--g
i Cercopithecus_pogonias.k141_1977419               C 0 C 0
s Cercopithecus_roloway.k141_3372345                     1481 3 -      4205 tg--a
i Cercopithecus_roloway.k141_3372345                C 0 C 0
s Cheirogaleus_major.k141_1157592                       55327 3 -     68416 tg--a
i Cheirogaleus_major.k141_1157592                   C 0 C 0
s Cheirogaleus_medius.k141_133808                        4377 3 +     13308 tg--a
i Cheirogaleus_medius.k141_133808                   C 0 C 0
s Cheracebus_lucifer.k141_619653                         1664 3 -     18223 tg--g
i Cheracebus_lucifer.k141_619653                    C 0 C 0
s Cheracebus_lugens.k141_203936                         18687 3 +     25473 tg--g
i Cheracebus_lugens.k141_203936                     C 0 C 0
s Cheracebus_regulus.k141_2128895                       37726 3 +     57117 tg--g
i Cheracebus_regulus.k141_2128895                   C 0 C 0
s Cheracebus_torquatus.k141_315545                      42401 3 +     54541 tg--g
i Cheracebus_torquatus.k141_315545                  C 0 C 0
s Chinchilla_lanigera.JH721867.1                     15957842 1 +  43084221 ----T
i Chinchilla_lanigera.JH721867.1                    I 1 I 15
s Chiropotes_israelita.k141_1189915                     67275 3 +    196370 tg--g
i Chiropotes_israelita.k141_1189915                 C 0 C 0
s Chiropotes_sagulatus.k141_773804                      11449 3 +     40510 tg--g
i Chiropotes_sagulatus.k141_773804                  C 0 C 0
s Chlorocebus_aethiops.ctg22                         15134761 3 -  15256731 tg--a
i Chlorocebus_aethiops.ctg22                        C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                  29807 3 -     53260 tg--a
i Chlorocebus_pygerythrus.k141_1486215              C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                    101140255 3 + 101219884 tg--a
i Chlorocebus_sabaeus.CM001963.2                    C 0 C 0
s Colobus_angolensis.KN985967.1                      10878837 3 +  10971483 tg--g
i Colobus_angolensis.KN985967.1                     C 0 C 0
s Colobus_guereza.LG08                              147659996 3 + 156195979 tg--g
i Colobus_guereza.LG08                              C 0 C 0
s Colobus_polykomos.k141_1406057                        11981 3 +     23629 tg--g
i Colobus_polykomos.k141_1406057                    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949             273951 3 -    399297 tg--a
i Cricetomys_gambianus.CriGam_scaffold_949          C 0 I 7
s Cricetulus_griseus.LT883672.1                      53025426 2 +  72327488 TG---
i Cricetulus_griseus.LT883672.1                     C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447              204665 3 -    956709 TG--A
i Ctenodactylus_gundi.CteGun_scaffold_447           C 0 I 15
s Ctenomys_sociabilis.CteSoc_scaffold_19489             26846 1 -     67205 ----A
i Ctenomys_sociabilis.CteSoc_scaffold_19489         C 0 I 20
s Cuniculus_paca.CunPac_flattened_line_16637            14612 1 +     26546 ----g
i Cuniculus_paca.CunPac_flattened_line_16637        I 1 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634         56085 1 -    236241 ----a
i Dasyprocta_punctata.DasPun_flattened_line_634     I 1 C 0
s Daubentonia_madagascariensis.ctg11                 16841201 3 +  31942871 tg--a
i Daubentonia_madagascariensis.ctg11                C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102            33341 1 -     73477 ----G
i Dolichotis_patagonum.DolPat_scaffold_14102        I 1 I 17
s Ellobius_lutescens.LOEQ01003611.1                    235613 3 -    369425 CA--A
i Ellobius_lutescens.LOEQ01003611.1                 C 0 I 6
s Ellobius_talpinus.LOJH01090055.1                       2623 3 -      7838 CA--A
i Ellobius_talpinus.LOJH01090055.1                  C 0 I 6
s Erythrocebus_patas.Contig8                         48766940 3 -  48907691 tg--a
i Erythrocebus_patas.Contig8                        C 0 C 0
s Eulemur_albifrons.k141_715837                          1400 3 +     13586 tg--g
i Eulemur_albifrons.k141_715837                     C 0 C 0
s Eulemur_collaris.k141_311830                           1337 3 -      6809 tg--g
i Eulemur_collaris.k141_311830                      C 0 C 0
s Eulemur_coronatus.k141_3240342                         7807 3 +     36558 tg--g
i Eulemur_coronatus.k141_3240342                    C 0 C 0
s Eulemur_flavifrons.k141_903901                         4124 3 +     60246 tg--g
i Eulemur_flavifrons.k141_903901                    C 0 C 0
s Eulemur_fulvus.k141_653297                             7612 3 +    109717 tg--g
i Eulemur_fulvus.k141_653297                        C 0 C 0
s Eulemur_macaco.k141_1341545                           11986 3 +     16540 tg--g
i Eulemur_macaco.k141_1341545                       C 0 C 0
s Eulemur_mongoz.k141_825972                            12263 3 +     27497 tg--g
i Eulemur_mongoz.k141_825972                        C 0 C 0
s Eulemur_rubriventer.k141_411740                       14719 3 +     26808 tg--g
i Eulemur_rubriventer.k141_411740                   C 0 C 0
s Eulemur_rufus.k141_1620292                            29453 3 +     46535 tg--g
i Eulemur_rufus.k141_1620292                        C 0 C 0
s Eulemur_sanfordi.k141_186399                          12176 3 -     29447 tg--g
i Eulemur_sanfordi.k141_186399                      C 0 C 0
s Fukomys_damarensis.KN123630.1                      13889416 1 -  19261668 ----a
i Fukomys_damarensis.KN123630.1                     I 2 I 12
s Galeopterus_variegatus.GalVar_scaffold_354           152640 3 +    324696 ag--c
i Galeopterus_variegatus.GalVar_scaffold_354        C 0 C 0
s Glis_glis.GliGli_scaffold_79770                        9085 3 -     18683 tg--a
i Glis_glis.GliGli_scaffold_79770                   C 0 C 0
s Gorilla_beringei.k141_111300                           1514 3 -     14630 tg--g
i Gorilla_beringei.k141_111300                      C 0 C 0
s Gorilla_gorilla.LT578340.1                        119648612 3 - 195582420 tg--g
i Gorilla_gorilla.LT578340.1                        C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493               73642 3 +    118900 TG--A
i Graphiurus_murinus.GraMur_scaffold_4493           C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                     1945 3 +      3980 tg--g
i Hapalemur_alaotrensis.k141_1198205                C 0 C 0
s Hapalemur_gilberti.k141_97962                         24425 3 +     26611 tg--g
i Hapalemur_gilberti.k141_97962                     C 0 C 0
s Hapalemur_griseus.k141_1387522                         1879 3 +     56096 tg--g
i Hapalemur_griseus.k141_1387522                    C 0 C 0
s Hapalemur_meridionalis.k141_186231                    25152 3 -     42470 tg--g
i Hapalemur_meridionalis.k141_186231                C 0 C 0
s Hapalemur_occidentalis.k141_797938                    41749 3 -     54384 tg--g
i Hapalemur_occidentalis.k141_797938                C 0 C 0
s Heterocephalus_glaber.JH602058.1                    2547401 1 +  31725842 ----a
i Heterocephalus_glaber.JH602058.1                  I 2 I 135
s Hoolock_leuconedys.ctg649                                98186 3 +    115816 tg--g
i Hoolock_leuconedys.ctg649                            C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       16277 1 -    119109 ----G
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259   I 1 C 0
s Hylobates_abbotti.k141_493872                          1323 3 +      5897 tg--g
i Hylobates_abbotti.k141_493872                     C 0 C 0
s Hylobates_agilis.k141_282275                            536 3 +      1846 tg--g
i Hylobates_agilis.k141_282275                      C 0 C 0
s Hylobates_klossii.k141_466549                          7781 3 +     11537 tg--g
i Hylobates_klossii.k141_466549                     C 0 C 0
s Hylobates_muelleri.k141_1133650                         758 3 -      2775 tg--g
i Hylobates_muelleri.k141_1133650                   C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                 2502 2 +     22540 -C--A
i Hystrix_cristata.HysCri_scaffold_50788            C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1               7122212 5 +  13083262 ttcaa
i Ictidomys_tridecemlineatus.JH393315.1             C 0 I 4
s Indri_indri.k141_3334527                               8389 3 +      9207 tg--g
i Indri_indri.k141_3334527                          C 0 C 0
s Jaculus_jaculus.JH725517.1                          8561763 3 +  11848649 TG--A
i Jaculus_jaculus.JH725517.1                        C 0 I 6
s Lagothrix_lagothricha.k141_12968                      46240 3 -    147782 tg--g
i Lagothrix_lagothricha.k141_12968                  C 0 C 0
s Lemur_catta.scaffold_1                            258403428 3 - 285822530 tg--g
i Lemur_catta.scaffold_1                            C 0 C 0
s Lepilemur_ankaranensis.k141_884009                    20322 3 +     39228 tg--a
i Lepilemur_ankaranensis.k141_884009                C 0 C 0
s Lepilemur_dorsalis.k141_134267                        49698 3 +     63517 ta--g
i Lepilemur_dorsalis.k141_134267                    C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                    74918 3 +    116806 tg--g
i Lepilemur_ruficaudatus.k141_617879                C 0 C 0
s Lepilemur_septentrionalis.k141_578524                 27958 3 -     33031 tg--a
i Lepilemur_septentrionalis.k141_578524             C 0 C 0
s Lophocebus_aterrimus.ctg55                         19244026 3 +  19376315 tg--g
i Lophocebus_aterrimus.ctg55                        C 0 C 0
s Loris_lydekkerianus.k141_550999                        6940 2 +     84689 tg---
i Loris_lydekkerianus.k141_550999                   C 0 C 0
s Loris_tardigradus.ctg97                             3774699 2 +   6799190 tg---
i Loris_tardigradus.ctg97                           C 0 C 0
s Macaca_arctoides.k141_2201161                         15712 3 +     74745 tg--g
i Macaca_arctoides.k141_2201161                     C 0 C 0
s Macaca_assamensis.Contig65                         12702218 3 +  12821369 tg--g
i Macaca_assamensis.Contig65                        C 0 C 0
s Macaca_cyclopis.k119_1168412                           4311 3 +      6569 tg--g
i Macaca_cyclopis.k119_1168412                      C 0 C 0
s Macaca_fascicularis.k141_155037                       42611 3 +     63263 tg--g
i Macaca_fascicularis.k141_155037                   C 0 C 0
s Macaca_fuscata.k119_1068107                           11188 3 +     12679 tg--c
i Macaca_fuscata.k119_1068107                       C 0 C 0
s Macaca_leonina.k141_3421209                             761 3 +      3017 tg--g
i Macaca_leonina.k141_3421209                       C 0 C 0
s Macaca_maura.k141_251854                              42373 3 -     79256 tg--g
i Macaca_maura.k141_251854                          C 0 C 0
s Macaca_mulatta.NC_041755.1                        196031293 3 + 196197964 tg--g
i Macaca_mulatta.NC_041755.1                        C 0 C 0
s Macaca_nemestrina.KQ004885.1                       11441397 3 +  11645122 tg--g
i Macaca_nemestrina.KQ004885.1                      C 0 C 0
s Macaca_nigra.k141_282495                               1323 3 -     46448 tg--g
i Macaca_nigra.k141_282495                          C 0 C 0
s Macaca_radiata.k141_1580474                            1150 3 -      3617 tg--g
i Macaca_radiata.k141_1580474                       C 0 C 0
s Macaca_siberu.k141_741907                             11483 3 -     55006 tg--g
i Macaca_siberu.k141_741907                         C 0 C 0
s Macaca_silenus.Contig12                            43836522 3 +  43892939 tg--g
i Macaca_silenus.Contig12                           C 0 C 0
s Macaca_thibetana.k99_116940                            3745 3 -      5978 tg--g
i Macaca_thibetana.k99_116940                       C 0 C 0
s Macaca_tonkeana.k141_2870633                           1325 3 -     27140 tg--g
i Macaca_tonkeana.k141_2870633                      C 0 C 0
s Mandrillus_leucophaeus.scaffold125                 43433186 3 -  43563597 tg--g
i Mandrillus_leucophaeus.scaffold125                C 0 C 0
s Mandrillus_sphinx.Contig144                         4446012 3 -   4543643 tg--g
i Mandrillus_sphinx.Contig144                       C 0 C 0
s Marmota_marmota.CZRN01000005.1                     36870056 5 +  64221397 ttcaa
i Marmota_marmota.CZRN01000005.1                    C 0 I 4
s Meriones_unguiculatus.MerUng_scaffold_52233            7963 3 +     15977 AG--A
i Meriones_unguiculatus.MerUng_scaffold_52233       C 0 I 17
s Mesocricetus_auratus.KB708139.1                     1042908 3 -  26018355 ag--a
i Mesocricetus_auratus.KB708139.1                   C 0 I 7
s Microcebus_murinus.CM007691.1                      16506543 3 +  47401472 TG--G
i Microcebus_murinus.CM007691.1                     C 0 C 0
s Microtus_ochrogaster.CM001673.1                    22815274 3 -  98408828 CC--A
i Microtus_ochrogaster.CM001673.1                   C 0 I 6
s Miopithecus_ogouensis.k141_2666161                    31860 3 +     34273 tg--g
i Miopithecus_ogouensis.k141_2666161                C 0 C 0
s Mirza_zaza.k141_226143                                 1957 3 +      8497 tg--g
i Mirza_zaza.k141_226143                            C 0 C 0
s Mus_caroli.LT608236.1                              70761428 3 +  92629107 TG--A
i Mus_caroli.LT608236.1                             C 0 I 17
s Mus_musculus.chr16                                 75484503 3 +  98207768 TG--A
i Mus_musculus.chr16                                C 0 I 17
s Mus_pahari.LT608305.1                              67549042 3 +  89017189 TG--A
i Mus_pahari.LT608305.1                             C 0 I 17
s Mus_spretus.CM004110.1                             74324141 3 +  97876770 TG--A
i Mus_spretus.CM004110.1                            C 0 I 17
s Muscardinus_avellanarius.MusAve_scaffold_9643          6959 3 +     98495 gg--a
i Muscardinus_avellanarius.MusAve_scaffold_9643     C 0 I 6
s Myocastor_coypus.MyoCoy_scaffold_3653                 86437 1 -    117718 ----A
i Myocastor_coypus.MyoCoy_scaffold_3653             C 0 I 16
s Nannospalax_galili.KL201303.1                        107233 3 +    362372 ta--g
i Nannospalax_galili.KL201303.1                     C 0 I 7
s Nasalis_larvatus.k141_153429                           4225 3 +     48152 tg--a
i Nasalis_larvatus.k141_153429                      C 0 I 8
s Octodon_degus.JH651621.1                            3674975 1 +  10294119 ----G
i Octodon_degus.JH651621.1                          C 0 I 20
s Nycticebus_bengalensis.LG16                        65563288 2 -  95554990 tg---
i Nycticebus_bengalensis.LG16                       C 0 C 0
s Nycticebus_coucang.k141_7268257                        2303 2 -      2537 tg---
i Nycticebus_coucang.k141_7268257                   C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17  65665651 2 +  89412551 tg---
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17 C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821              121092 3 +    145789 CA--A
i Ondatra_zibethicus.OndZib_scaffold_6821           C 0 I 6
s Onychomys_torridus.OnyTor_scaffold_12578              33033 3 +     62360 TG--A
i Onychomys_torridus.OnyTor_scaffold_12578          C 0 I 4
s Pan_paniscus.CM003386.1                           127570856 3 - 205426864 tg--g
i Pan_paniscus.CM003386.1                           C 0 I 36
s Pan_troglodytes.CM009241.2                        120148003 3 - 196562556 tg--g
i Pan_troglodytes.CM009241.2                        I 7 I 36
s Papio_anubis.CM001492.2                           188151971 3 - 188283584 tg--g
i Papio_anubis.CM001492.2                           C 0 C 0
s Papio_cynocephalus.k141_386926                        48183 3 +     76494 tg--g
i Papio_cynocephalus.k141_386926                    C 0 C 0
s Papio_hamadryas.Contig15                           47509367 3 +  47705337 tg--g
i Papio_hamadryas.Contig15                          C 0 C 0
s Papio_kindae.k141_5458022                             63350 3 -    104429 tg--g
i Papio_kindae.k141_5458022                         C 0 C 0
s Papio_papio.k141_3561084                              13134 3 -     29451 tg--g
i Papio_papio.k141_3561084                          C 0 C 0
s Papio_ursinus.k141_3762866                            33539 3 +     35859 tg--g
i Papio_ursinus.k141_3762866                        C 0 C 0
s Perodicticus_ibeanus.k141_117958                       1293 2 -     23713 tg---
i Perodicticus_ibeanus.k141_117958                  C 0 I 2
s Perodicticus_potto.k141_713187                        20590 2 -     27972 tg---
i Perodicticus_potto.k141_713187                    C 0 I 2
s Peromyscus_maniculatus.KI615518.1                   4946195 3 -   8017169 CA--A
i Peromyscus_maniculatus.KI615518.1                 C 0 I 7
s Piliocolobus_badius.k141_1497351                       1226 3 -      3310 tg--g
i Piliocolobus_badius.k141_1497351                  C 0 C 0
s Piliocolobus_gordonorum.k141_902470                   21132 3 -     82327 tg--g
i Piliocolobus_gordonorum.k141_902470               C 0 C 0
s Piliocolobus_kirkii.k141_557609                       17883 3 +     19957 tg--g
i Piliocolobus_kirkii.k141_557609                   C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1           26735892 3 +  26888534 tg--g
i Piliocolobus_tephrosceles.PDMG02000036.1          C 0 C 0
s Pithecia_albicans.k141_991845                         39767 3 -     61926 tg--g
i Pithecia_albicans.k141_991845                     C 0 C 0
s Pithecia_chrysocephala.k141_159118                    21196 3 +     78826 tg--g
i Pithecia_chrysocephala.k141_159118                C 0 C 0
s Pithecia_hirsuta.k141_1152968                          5147 3 -     15800 tg--g
i Pithecia_hirsuta.k141_1152968                     C 0 C 0
s Pithecia_mittermeieri.k141_2119203                     8345 3 -     16101 tg--g
i Pithecia_mittermeieri.k141_2119203                C 0 C 0
s Pithecia_pissinattii.k141_1102319                      1654 3 +      9673 tg--g
i Pithecia_pissinattii.k141_1102319                 C 0 C 0
s Pithecia_pithecia.tarseq_313                       13470648 3 -  19735023 tg--g
i Pithecia_pithecia.tarseq_313                      C 0 C 0
s Pithecia_vanzolinii.k141_831006                        9556 3 -     31692 tg--g
i Pithecia_vanzolinii.k141_831006                   C 0 C 0
s Plecturocebus_bernhardi.k141_959214                   18920 3 +     44506 tg--g
i Plecturocebus_bernhardi.k141_959214               C 0 C 0
s Plecturocebus_brunneus.k141_498086                    19138 3 +     67491 tg--g
i Plecturocebus_brunneus.k141_498086                C 0 C 0
s Plecturocebus_caligatus.k141_2539816                   9383 3 -     98129 tg--g
i Plecturocebus_caligatus.k141_2539816              C 0 C 0
s Plecturocebus_cinerascens.k141_744510                 18983 3 +    147771 tg--g
i Plecturocebus_cinerascens.k141_744510             C 0 C 0
s Plecturocebus_cupreus.k141_1223294                    19234 3 -     23762 tg--g
i Plecturocebus_cupreus.k141_1223294                C 0 C 0
s Plecturocebus_dubius.k141_2078842                     19182 3 -     19696 tg--g
i Plecturocebus_dubius.k141_2078842                 C 0 C 0
s Plecturocebus_grovesi.k141_242819                     19056 3 +    152463 tg--g
i Plecturocebus_grovesi.k141_242819                 C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                  5813 3 +      8943 tg--g
i Plecturocebus_hoffmannsi.k141_1595076             C 0 C 0
s Plecturocebus_miltoni.k141_841561                      8773 3 +    134592 tg--g
i Plecturocebus_miltoni.k141_841561                 C 0 C 0
s Plecturocebus_moloch.k141_890597                      19366 3 -     75465 tg--g
i Plecturocebus_moloch.k141_890597                  C 0 C 0
s Pongo_abelii.NDHI03003816.1                          183409 3 -    373494 tg--g
i Pongo_abelii.NDHI03003816.1                       C 0 C 0
s Pongo_pygmaeus.ctg62                               19803312 3 +  19899266 tg--g
i Pongo_pygmaeus.ctg62                              C 0 C 0
s Presbytis_comata.k141_672698                           1462 3 -     15069 tg--g
i Presbytis_comata.k141_672698                      C 0 C 0
s Presbytis_mitrata.k141_860013                          1596 3 +     14865 tg--g
i Presbytis_mitrata.k141_860013                     C 0 C 0
s Prolemur_simus.MPIZ01000048.1                       6844801 3 +  12164890 TG--G
i Prolemur_simus.MPIZ01000048.1                     C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                 13236 3 -     30946 TG--G
i Propithecus_coquerelli.NW_012147863.1             C 0 C 0
s Propithecus_diadema.k141_577245                       39271 3 +     52369 tg--g
i Propithecus_diadema.k141_577245                   C 0 C 0
s Propithecus_edwardsi.k141_1317105                     31660 3 -     44753 tg--g
i Propithecus_edwardsi.k141_1317105                 C 0 C 0
s Propithecus_perrieri.k141_7554                        13582 3 +     27322 tg--g
i Propithecus_perrieri.k141_7554                    C 0 C 0
s Propithecus_tattersalli.k141_907138                   13226 3 -     53241 tg--g
i Propithecus_tattersalli.k141_907138               C 0 C 0
s Propithecus_verreauxi.k141_158021                     35497 3 -     48185 tg--g
i Propithecus_verreauxi.k141_158021                 C 0 C 0
s Psammomys_obesus.NESX01026517.1                       29024 3 +     77221 ag--a
i Psammomys_obesus.NESX01026517.1                   C 0 I 17
s Pygathrix_cinerea.k141_374971                         25587 3 +     56732 tg--a
i Pygathrix_cinerea.k141_374971                     C 0 C 0
s Pygathrix_nigripes_b.ctg79                             6802077 3 +   6970761 tg--a
i Pygathrix_nigripes_b.ctg79                           C 0 C 0
s Pygathrix_nigripes_a.k141_101123                         1469 3 +     18040 tg--a
i Pygathrix_nigripes_a.k141_101123                    C 0 C 0
s Rattus_norvegicus.chr11                            13910968 3 +  90463843 TG--A
i Rattus_norvegicus.chr11                           C 0 I 17
s Rhinopithecus_bieti.k119_102124                       12024 3 -     14454 tg--a
i Rhinopithecus_bieti.k119_102124                   C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1               206373350 3 - 206558726 tg--a
i Rhinopithecus_roxellana.NC_044549.1               C 0 C 0
s Rhinopithecus_strykeri.ctg4                        44850998 3 -  45163003 tg--a
i Rhinopithecus_strykeri.ctg4                       C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                 15668791 3 -  43202129 tg--g
i Saimiri_boliviensis.NW_024100938.1                C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                     666 3 +     34089 tg--g
i Saimiri_cassiquiarensis.k141_808270               C 0 C 0
s Saimiri_macrodon.k141_2087127                           597 3 -     60842 tg--g
i Saimiri_macrodon.k141_2087127                     C 0 C 0
s Saimiri_oerstedii.k141_841116                           666 3 +     67014 tg--g
i Saimiri_oerstedii.k141_841116                     C 0 C 0
s Saimiri_sciureus.k141_1947592                           666 3 +     60816 tg--g
i Saimiri_sciureus.k141_1947592                     C 0 C 0
s Saimiri_ustus.k141_1282476                              594 3 -     76454 tg--g
i Saimiri_ustus.k141_1282476                        C 0 C 0
s Sapajus_apella.ctg10                               17337174 3 -  30362882 tg--g
i Sapajus_apella.ctg10                              C 0 C 0
s Sapajus_macrocephalus.k141_966464                     16775 3 -     62485 tg--g
i Sapajus_macrocephalus.k141_966464                 C 0 C 0
s Semnopithecus_entellus.k141_1527475                   24012 3 +     26421 tg--g
i Semnopithecus_entellus.k141_1527475               C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                   4474 3 +     20762 tg--g
i Semnopithecus_hypoleucos.k141_761524              C 0 C 0
s Semnopithecus_johnii.k141_1351450                     38207 3 +     40653 tg--g
i Semnopithecus_johnii.k141_1351450                 C 0 C 0
s Semnopithecus_priam.k141_198153                        8766 3 -     12194 tg--g
i Semnopithecus_priam.k141_198153                   C 0 C 0
s Semnopithecus_schistaceus.k141_653647                 22185 3 -     27512 tg--g
i Semnopithecus_schistaceus.k141_653647             C 0 C 0
s Semnopithecus_vetulus.k141_642050                     31206 3 -     33692 tg--g
i Semnopithecus_vetulus.k141_642050                 C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332               94278 3 -    120886 CA--A
i Sigmodon_hispidus.SigHis_scaffold_11332           C 0 I 7
s Spermophilus_dauricus.KZ294190.1                    2236138 5 +   2842873 ttcaa
i Spermophilus_dauricus.KZ294190.1                  C 0 I 4
s Symphalangus_syndactylus.tarseq_24                 13898136 3 +  13920577 tg--g
i Symphalangus_syndactylus.tarseq_24                C 0 I 36
s Tarsius_lariang.k141_609102                           22923 3 +     42269 tg--g
i Tarsius_lariang.k141_609102                       C 0 C 0
s Tarsius_wallacei.k141_48636                           56231 3 +     65473 tg--g
i Tarsius_wallacei.k141_48636                       C 0 C 0
s Theropithecus_gelada.CM009951.1                   194003506 3 - 194193292 tg--c
i Theropithecus_gelada.CM009951.1                   C 0 C 0
s Trachypithecus_auratus.k141_738098                    22584 3 +     38948 tg--g
i Trachypithecus_auratus.k141_738098                C 0 C 0
s Trachypithecus_crepusculus.k141_1588528               16311 3 -     32910 tg--g
i Trachypithecus_crepusculus.k141_1588528           C 0 C 0
s Trachypithecus_cristatus.k141_27198                   22209 3 +     24652 tg--g
i Trachypithecus_cristatus.k141_27198               C 0 C 0
s Trachypithecus_francoisi.k141_1178450                  1094 3 -      3559 tg--g
i Trachypithecus_francoisi.k141_1178450             C 0 C 0
s Trachypithecus_geei.k141_670367                       39033 3 -     54611 tg--g
i Trachypithecus_geei.k141_670367                   C 0 C 0
s Trachypithecus_germaini.k141_809503                   15032 3 +     17312 tg--g
i Trachypithecus_germaini.k141_809503               C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                22402 3 -     25040 tg--g
i Trachypithecus_hatinhensis.k141_357672            C 0 C 0
s Trachypithecus_laotum.k141_171445                      1068 3 +      3528 tg--g
i Trachypithecus_laotum.k141_171445                 C 0 C 0
s Trachypithecus_leucocephalus.k141_283605              47430 3 +     51589 tg--g
i Trachypithecus_leucocephalus.k141_283605          C 0 C 0
s Trachypithecus_melamera.k141_238507                   10598 3 +     14732 tg--g
i Trachypithecus_melamera.k141_238507               C 0 C 0
s Trachypithecus_obscurus.k141_1115109                   1076 3 -     28054 tg--g
i Trachypithecus_obscurus.k141_1115109              C 0 C 0
s Trachypithecus_phayrei.ctg3                        44655871 3 -  44834318 tg--g
i Trachypithecus_phayrei.ctg3                       C 0 C 0
s Trachypithecus_pileatus.k141_469329                     881 3 +      3372 tg--g
i Trachypithecus_pileatus.k141_469329               C 0 C 0
s Tupaia_chinensis.KB320831.1                         2787083 3 -   3938065 tg--g
i Tupaia_chinensis.KB320831.1                       C 0 C 0
s Tupaia_tana.TupTan_flattened_line_3657864                73 3 +       342 tg--g
i Tupaia_tana.TupTan_flattened_line_3657864         C 0 C 0
s Varecia_rubra.k141_432109                              1747 3 -     20643 tg--g
i Varecia_rubra.k141_432109                         C 0 C 0
s Varecia_variegata.k141_775891                         21292 3 -     33872 tg--g
i Varecia_variegata.k141_775891                     C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                   123329 5 -    134049 TTCAA
i Xerus_inauris.XerIna_scaffold_7898                C 0 I 4
s Zapus_hudsonius.ZapHud_scaffold_64392                 12173 3 -     20485 tc--a
i Zapus_hudsonius.ZapHud_scaffold_64392             I 63 I 7
e Hylobates_pileatus_b.LG03                                 92553610 0 - 189753342 C
e Otolemur_garnettii.GL873528.1                      18004869 68 -  38779656 I
e Otolemur_crassicaudatus.k141_321880                   35431 68 +     38679 I
e Galagoides_demidoff.k141_1769638                       6763 68 +     27357 I
e Galago_senegalensis.k141_964197                        9743 68 -     43889 I
e Galago_moholi.ctg555                                 207363 68 -    847004 I
e Nomascus_siki_b.tarseq_80                         20456 0 -  18771707 C
e Nomascus_annamensis.k141_745421                         374 0 -      4569 C
e Nomascus_gabriellae.k141_1350167                        785 0 +      9928 C

a score=0.000000
s hg38.chr4_GL000008v2_random                                8125 36 +    209709 taa--ccact-gttt-------ta-tac----------tc----ta-tctc--tg-c--atatt----taa
s Acinonyx_jubatus.LLWD01000356.1                         2030262  4 +   3721120 --------------------------------------------------------------tt----ta-
i Acinonyx_jubatus.LLWD01000356.1                       N 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    108525 19 -    189883 --------------------------------------TC----TA-TCTC--TA-T--GAAAT----AAG
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 9 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10653595  4 +  23371972 --------------------------------------------------------------TT----CA-
i Ailuropoda_melanoleuca.LNAT01000321.1                 N 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7090097  4 -  16596857 --------------------------------------------------------------TT----CA-
i Ailurus_fulgens.LNAC01000003.1                        N 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                    8811 21 -     22067 --------------------------AA----------TC----TA-CTTC--TA-T--ATGTT----CAA
i Allactaga_bullata.AllBul_scaffold_70162               I 6 C 0
s Allenopithecus_nigroviridis.k141_3103707                  59147 36 +     61638 taa--cccct-attt-------ta-tac----------tc----ta-tctc--tg-t--gtatt----taa
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        50955 36 +     53391 taa--cccct-gttt-------ta-tac----------tc----ta-tctc--tg-t--gtatt----taa
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         1679 36 +     72529 taa--cccct-gttt-------ta-tac----------tc----ta-tctc--tg-t--gtatt----taa
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          1255 36 +      3797 taa--cccct-gttt-------ta-tac----------tc----ta-tctc--tg-t--gtatt----taa
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             6340 45 -     18050 taa--tcact-gttt-------ta-tactctattatactc----ta-tctc--t--t--gtatt----caa
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  7457 45 -     11521 taa--tcact-gttt-------ta-tactctattatactc----ta-tctc--t--t--gtatt----caa
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              7015 45 -     21359 taa--tcact-gttt-------ta-tactctattatactc----ta-tctc--t--t--gtatt----caa
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1856473                                5398 45 +      7227 taa--tcact-gttt-------ta-tactctattatactc----ta-tctc--t--t--gtatt----caa
i Alouatta_juara.k141_1856473                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          6313 45 -     10438 taa--tcact-gttt-------ta-tactctattatactc----ta-tctc--t--t--gtatt----caa
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            2967 45 +      7047 taa--tcact-gttt-------ta-tactctattatactc----ta-tctc--t--t--gtatt----caa
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             6251 45 +     10410 taa--tcact-gttt-------ta-tactctattatactc----ta-tctc--t--t--gtatt----caa
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_390786                             7528 45 -      7615 taa--tcact-gttt-------ta-tactctattatactc----ta-tctc--t--t--gtatt----caa
i Alouatta_puruensis.k141_390786                        C 0 C 0
s Alouatta_seniculus.k141_990213                             2972 45 +      6429 taa--tcact-gttt-------ta-tactctattatactc----ta-tctc--t--t--gtatt----caa
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3516760  3 +   4113121 --------------------------------------------------------------TT----C--
i Ammotragus_lervia.NIVO01013474.1                      N 0 I 1
s Anoura_caudifer.AnoCau_scaffold_422                      387222  4 -    631301 --------------------------------------------------------------TT----CA-
i Anoura_caudifer.AnoCau_scaffold_422                   N 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            27666  3 +     33004 --------------------------------------------------------------TT----C--
i Antilocapra_americana.AntAmePen_scaffold_42841        N 0 I 1
s Aotus_azarae.k141_3170768                                 58656 35 +     78111 taa--tcact-gttt-------ta-tac----------tc----ta-tctc--t--t--gtatt----caa
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            1587 35 +     22701 taa--tcact-gttt-------ta-tac----------tc----ta-tctc--t--t--gtatt----caa
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5745547 35 +   9889416 taa--tcaCT-GTTT-------TA-TAC----------TC----TA-TCTC--T--T--GTAtt----caa
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             2139 35 -    104377 taa--tcact-gttt-------ta-tac----------tc----ta-tctc--t--t--gtatt----caa
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               2139 35 +     23246 taa--tcact-gttt-------ta-tac----------tc----ta-tctc--t--t--gtatt----caa
i Aotus_vociferans.k141_718647                          C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      14447 27 +     17483 -------------ct-------ta-ttc----------tc----tattatc--at-t--gtact----tga
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 5318  4 -     29036 --------------------------------------------------------------TT----CA-
i Artibeus_jamaicensis.ArtJam_scaffold_41619            N 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9535400 35 +  39197703 taa--tcact-gttt-------ta-tac----------tc----ta-tctc--t--t--gtgtt----caa
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             56688 35 +     85812 taa--tcact-gttt-------ta-tac----------tc----ta-tctc--t--t--gtatt----cag
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 7685 35 +     89302 taa--tcact-gttt-------ta-tac----------tc----ta-tctc--t--t--gtatt----cag
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             12194 35 -     58268 taa--tcact-gttt-------ta-tac----------tc----ta-tctc--t--t--gtgtt----caa
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             60182 35 +    119057 taa--tcact-gttt-------ta-tac----------tc----ta-tctc--t--t--gtatt----cag
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               2133 35 -     25888 taa--tcact-gttt-------ta-tac----------tc----ta-tctc--t--t--gtatt----cag
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 2994 36 -     16375 tag--ccaac-attt-------ta-ttc----------tc----ta-tttc--tg-t--gtatt----tga
i Avahi_laniger.k141_2840928                            C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26376966  3 +  51448160 ---------------------------------------------------------------T----CA-
i Balaenoptera_acutorostrata.KI537095.1                 N 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        2197  3 -     13118 ---------------------------------------------------------------T----CA-
i Balaenoptera_bonaerensis.DF502048.1                   N 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   39860  3 -     72089 --------------------------------------------------------------TT----C--
i Beatragus_hunteri.BeaHun_scaffold_21644               N 0 I 1
s Bison_bison.KN264915.1                                  6556282  3 +   6870073 --------------------------------------------------------------TT----C--
i Bison_bison.KN264915.1                                N 0 I 1
s Bos_indicus.CM003021.1                                138136513  3 - 161108492 --------------------------------------------------------------TT----C--
i Bos_indicus.CM003021.1                                N 0 I 1
s Bos_mutus.JH883513.1                                     568891  3 -    998990 --------------------------------------------------------------TT----C--
i Bos_mutus.JH883513.1                                  N 0 I 1
s Bos_taurus.CM000177.6                                 136292246  3 - 158972876 --------------------------------------------------------------TT----C--
i Bos_taurus.CM000177.6                                 N 0 I 1
s Bubalus_bubalis.KI419065.1                              1227867  3 -   1914593 --------------------------------------------------------------TT----C--
i Bubalus_bubalis.KI419065.1                            N 0 I 1
s Avahi_peyrierasi.k141_767228                               8967 31 -      9688 tag--ccaac-attt-------ta-ttc----------tc----ta-tttc--tg-t--gta---------
i Avahi_peyrierasi.k141_767228                          C 0 I 4
s Cacajao_ayresi.k141_724503                               110057 35 -    171031 taa--tcact-gttt-------ta-tac----------tc----ta-tctc--t--t--gtatt----caa
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                  9083 35 +    125063 taa--tcact-gttt-------ta-tac----------tc----ta-tctc--t--t--gtatt----caa
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                11131 35 -    216513 taa--tcact-gttt-------ta-tac----------tc----ta-tctc--t--t--gtatt----caa
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        3670 35 -    134917 taa--tcact-gttt-------ta-tac----------tc----ta-tctc--t--t--gtatt----caa
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3216000  4 -   8989139 --------------------------------------------------------------TT----CA-
i Camelus_bactrianus.KN276303.1                         N 0 C 0
s Camelus_dromedarius.KN271192.1                           394187  4 -  15254737 --------------------------------------------------------------TT----CA-
i Camelus_dromedarius.KN271192.1                        N 0 C 0
s Camelus_ferus.KB016973.1                                2969921  4 +   6889770 --------------------------------------------------------------TT----CA-
i Camelus_ferus.KB016973.1                              N 0 C 0
s CanFam4.chr31                                          11514983  4 +  39901454 --------------------------------------------------------------TT----CG-
i CanFam4.chr31                                         N 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   10000  4 +     87036 --------------------------------------------------------------TT----CG-
i Canis_lupus_VD.CanFam_VD_scaffold_16982               N 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11261642  4 -  35597290 --------------------------------------------------------------TT----CG-
i Canis_lupus_dingo.QKWQ01001993.1                      N 0 C 0
s Canis_lupus_familiaris.chr31                           11084171  4 +  39895921 --------------------------------------------------------------TT----CG-
i Canis_lupus_familiaris.chr31                          N 0 C 0
s Canis_lupus_orion.HG994411.1                           16451205  4 -  44759192 --------------------------------------------------------------TT----CG-
i Canis_lupus_orion.HG994411.1                          N 0 C 0
s Capra_aegagrus.CM003214.1                              21321867  3 + 157394656 --------------------------------------------------------------TT----C--
i Capra_aegagrus.CM003214.1                             N 0 I 1
s Capra_hircus.CM004562.1                               135703094  3 - 157403528 --------------------------------------------------------------TT----C--
i Capra_hircus.CM004562.1                               N 0 I 1
s Capromys_pilorides.CapPil_scaffold_647363                   706 17 +      1887 --------------------------------------------TA-CATG--TG-T--ACATT----CAA
i Capromys_pilorides.CapPil_scaffold_647363             I 20 C 0
s Carlito_syrichta.NW_007248099.1                          305441 34 +    345090 taa--ccact-gttt-------ta-t------------TC----TG-CCTC--TG-T--GTACT----TGA
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               56399  4 +     67245 --------------------------------------------------------------TT----CA-
i Carollia_perspicillata.CarPer_scaffold_4436           N 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   155716  4 -    276539 --------------------------------------------------------------TT----CA-
i Catagonus_wagneri.CatWag_scaffold_1305                N 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   26987 28 +     33760 aa---ctacc-attt-------ta-tta----------tc----ta-tctc--tg-t--g-----------
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Cavia_porcellus.DS562889.1                             15795782 16 -  24440124 --------------------------------------tc----ta-aata--tg-t--ACATT-------
i Cavia_porcellus.DS562889.1                            I 18 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       173973 16 +    436027 --------------------------------------TC----TA-AATA--TG-T--ACATT-------
i Cavia_tschudii.CavTsc_scaffold_488                    I 18 C 0
s Cavia_aperea.AVPZ01000278.1                            15783830 18 -  24422027 ATA-ATGTca-gttt--tctt-c------------------------------------------------
i Cavia_aperea.AVPZ01000278.1                           C 0 I 16
s Cebus_albifrons.Contig22                               18886868 35 -  29618158 taa--tcagt-gttt-------ta-tac----------tc----ta-tctc--t--t--gtatt----caa
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 4414 35 -     26817 taa--tcagt-gttt-------ta-tac----------tc----ta-tctc--t--t--gtatt----caa
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                 8654 35 +     25043 taa--tcagt-gttt-------ta-tac----------tc----ta-tctc--t--t--gtatt----caa
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         4477 34 +     21754 taa--ccact-gttt-------ta-t------------tc----tg-cctc--tg-t--gtact----tga
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4359528  4 +   7569818 --------------------------------------------------------------tt----ca-
i Ceratotherium_simum.JH767818.1                        N 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_305802         1170  4 +      1857 --------------------------------------------------------------TT----CA-
i Ceratotherium_simum_cottoni.CerCot_scaffold_305802    N 0 C 0
s Cercocebus_atys.KQ010443.1                              6550943 36 +   6739814 taa--ccccT-GTTT-------TA-TAC----------TC----TA-TCTC--tg-t--gtatt----taa
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      52420 36 -     54931 taa--cccct-gttt-------ta-tac----------tc----ta-tctc--tg-t--gtatt----taa
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         17404 36 -     19697 taa--cccct-gttt-------ta-tac----------tc----ta-tctc--tg-t--gtatt----taa
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         54935 36 -    107033 taa--cccct-gttt-------ta-tac----------tc----ta-tctc--tg-t--gtatt----taa
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        1378 36 -      3853 taa--cccct-gttt-------ta-tac----------tc----ta-tctc--tg-t--gtatt----taa
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          25310 36 +     30494 taa--cccct-gttt-------ta-tac----------tc----ta-tctc--tg-t--gtatt----taa
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           1333 36 -      4022 taa--cccct-gttt-------ta-tac----------tc----ta-tctc--tg-t--gtatt----taa
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          1223 36 -      3505 taa--cccct-gttt-------ta-tac----------tc----ta-tctc--tg-t--gtatt----taa
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           20034 36 +     35983 taa--cccct-gttt-------ta-tac----------tc----ta-tctc--tg-t--gtatt----taa
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11985810 36 +  12117833 taa--cccct-gttt-------ta-tac----------tc----ta-tctc--tg-t--atatt----taa
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46473306 36 +  46592721 taa--cccct-gttt-------ta-tac----------tc----ta-tctc--tg-t--gtatt----taa
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      31133 36 +     33420 taa--cccct-gttt-------ta-tac----------tc----ta-tctc--tg-t--gtatt----taa
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        1169 36 -      3443 taa--cccct-gttt-------ta-tac----------tc----ta-tctc--tg-t--gtatt----taa
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      2160 36 -      4669 taa--cccct-gttt-------ta-tac----------tc----ta-tctc--tg-t--gtatt----taa
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        1964 36 -      4411 taa--cccct-gttt-------ta-tac----------tc----ta-tctc--tg-t--gtatt----taa
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         1484 36 -      4205 taa--cccct-gttt-------ta-tac----------tc----ta-tctc--tg-t--gtatt----taa
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           55330 36 -     68416 tag--ccaat-gttt-------ta-ttc----------tc----ta-tttc--tg-t--gtatt----tga
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            4380 36 +     13308 ttg--ccaat-gttt-------ta-ttc----------tt----ta-tttc--tg-t--gtatt----tga
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             1667 35 -     18223 taa--tcact-gtct-------ta-tac----------tc----ta-tctg--t--t--gtatt----caa
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             18690 35 +     25473 taa--tcact-gtct-------ta-tac----------tc----ta-tctg--t--t--gtatt----caa
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           37729 35 +     57117 taa--tcact-gtct-------ta-tac----------tc----ta-tctg--t--t--gtatt----caa
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          42404 35 +     54541 taa--tcact-gtct-------ta-tac----------tc----ta-tctg--t--t--gtatt----caa
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15957858 16 +  43084221 ---------------------------------------------T-TATA--TG-T--ACATT----CAA
i Chinchilla_lanigera.JH721867.1                        I 15 C 0
s Chiropotes_israelita.k141_1189915                         67278 35 +    196370 taa--tcact-gttt-------ta-tat----------tc----ta-tctc--t--t--gtatt----caa
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          11452 35 +     40510 taa--tcact-gttt-------ta-tat----------tc----ta-tctc--t--t--gtatt----caa
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15134764 36 -  15256731 taa--cccct-gttt-------ta-tac----------tc----ta-tctc--tg-t--gtatt----taa
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      29810 36 -     53260 taa--cccct-gttt-------ta-tac----------tc----ta-tctc--tg-t--gtatt----taa
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101140258 36 + 101219884 TAA--CCCCT-GTTT-------TA-TAC----------TC----TA-TCTC--tg-t--gtatt----taa
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                13397  6 -     21363 ------------------------------------------------------------TGCT----CA-
i Choloepus_didactylus.ChoDid_scaffold_36182            N 0 C 0
s Choloepus_hoffmanni.KN194586.1                           758703  6 +    964067 ------------------------------------------------------------TGTT----CA-
i Choloepus_hoffmanni.KN194586.1                        N 0 C 0
s Colobus_angolensis.KN985967.1                          10878840 36 +  10971483 taa--ccccT-GTTT-------TA-TAC----------TC----TA-TCTC--tg-t--gtatt----taa
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147659999 36 + 156195979 taa--cccct-gttt-------ta-tac----------tc----ta-tctc--tg-t--gtatt----taa
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            11984 36 +     23629 taa--cccct-gttt-------ta-tac----------tc----ta-tctc--tg-t--gtatt----taa
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60609682  3 +  78930452 ---------------------------------------------------------------A----GA-
i Condylura_cristata.JH655880.1                         N 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         35786  4 -     40477 --------------------------------------------------------------TT----CA-
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     N 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 273961 21 -    399297 --------------------------ca----------tc----ta-actc--tt-t--gAATT----CAA
i Cricetomys_gambianus.CriGam_scaffold_949              I 7 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             15612  3 -     19186 ---------------------------------------------------------------T----AA-
i Crocidura_indochinensis.CroInd_scaffold_38409         N 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            48292  4 -     70449 --------------------------------------------------------------CT----TA-
i Cryptoprocta_ferox.CryFer_flattened_line_19014        N 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  204683 22 -    956709 -------------------------TTC----------TC----TC-TTTC--AA-T--ACCTC----CAA
i Ctenodactylus_gundi.CteGun_scaffold_447               I 15 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 26867 17 -     67205 --------------------------------------------TA-TATG--TG-T--ACATT----CAA
i Ctenomys_sociabilis.CteSoc_scaffold_19489             I 20 C 0
s Dasypus_novemcinctus.JH568778.1                          178575  6 -   6883506 ------------------------------------------------------------TGCT----TG-
i Dasypus_novemcinctus.JH568778.1                       N 0 C 0
s Cricetulus_griseus.LT883672.1                          53025428  1 +  72327488 A----------------------------------------------------------------------
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                14613 18 +     26546 aca-acgtca-gttc--tatt-c------------------------------------------------
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 I 16
s Dasyprocta_punctata.DasPun_flattened_line_634             56086 18 -    236241 ata-atgtca-gttc--tctt-c------------------------------------------------
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 I 16
s Daubentonia_madagascariensis.ctg11                     16841204 36 +  31942871 taa--ccact-gttt-------ta-ttc----------tc----ta-tatc--tg-t--gtatt----gga
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80033705  3 -  96802777 ---------------------------------------------------------------T----CA-
i Delphinapterus_leucas.KZ290064.1                      N 0 C 0
s Desmodus_rotundus.KZ672188.1                           18695707  4 -  18957592 --------------------------------------------------------------tt----ca-
i Desmodus_rotundus.KZ672188.1                          N 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 318836  4 +    993696 --------------------------------------------------------------TT----CA-
i Dicerorhinus_sumatrensis.PEKH010003161.1              N 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_24487                 60991  4 +     62380 --------------------------------------------------------------TT----CA-
i Diceros_bicornis.DicBicMic_scaffold_24487             N 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                33359 16 -     73477 --------------------------------------TC----TA-AATA--TG-T--ACATT-------
i Dolichotis_patagonum.DolPat_scaffold_14102            I 17 C 0
s Echinops_telfairi.JH980316.1                           22990737  6 -  44670279 ------------------------------------------------------------CATT----TG-
i Echinops_telfairi.JH980316.1                          N 0 C 0
s Eidolon_helvum.KE772537.1                                  9077  4 +     24177 --------------------------------------------------------------TT----CA-
i Eidolon_helvum.KE772537.1                             N 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1488406  3 +   1727528 --------------------------------------------------------------TC----C--
i Elaphurus_davidianus.JRFZ01086400.1                   N 0 I 1
s Elephantulus_edwardii.JH947210.1                        7803127  6 +  15467074 ------------------------------------------------------------CACT----CA-
i Elephantulus_edwardii.JH947210.1                      N 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        235622 20 -    369425 --------------------------CA----------TC----TA-TCTC--TA-T--GAATT----CT-
i Ellobius_lutescens.LOEQ01003611.1                     I 6 C 0
s Ellobius_talpinus.LOJH01090055.1                           2632 20 -      7838 --------------------------CA----------TC----TA-TCTC--TA-T--GAATT----CT-
i Ellobius_talpinus.LOJH01090055.1                      I 6 C 0
s Enhydra_lutris.KZ291749.1                              85866904  4 +  99434291 --------------------------------------------------------------TT----CA-
i Enhydra_lutris.KZ291749.1                             N 0 C 0
s Equus_asinus.JREZ01000137.1                             2952096  4 -   4388051 --------------------------------------------------------------TT----GA-
i Equus_asinus.JREZ01000137.1                           N 0 C 0
s Equus_caballus.CM000402.2                              13346107  4 +  41866177 --------------------------------------------------------------TT----GA-
i Equus_caballus.CM000402.2                             N 0 C 0
s Equus_przewalskii.ATBW01073585.1                           8099  4 +     92910 --------------------------------------------------------------TT----GA-
i Equus_przewalskii.ATBW01073585.1                      N 0 C 0
s Erythrocebus_patas.Contig8                             48766943 36 -  48907691 taa--cccct-gttt-------ta-tac----------tc----ta-tctc--tg-t--gtatt----taa
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          311850  3 +    330699 ---------------------------------------------------------------T----CA-
i Eschrichtius_robustus.EscRob_flattened_line_685       N 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             58279  3 +     89355 ---------------------------------------------------------------T----CA-
i Eubalaena_japonica.EubJap_flattened_line_7756         N 0 C 0
s Eulemur_albifrons.k141_715837                              1403 36 +     13586 taa--ccaac-gttt-------ta-ttc----------tc----ta-tttg--tg-t--atatt----tga
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               1340 36 -      6809 taa--ccaac-gttt-------ta-ttc----------tc----ta-tttg--tg-t--atatt----tga
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             7810 36 +     36558 taa--ccaac-gttt-------ta-ttc----------tc----ta-tttg--tg-t--atatt----tga
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             4127 36 +     60246 taa--ccaac-gttt-------ta-ttc----------tc----ta-tttc--tg-t--gtatt----tga
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 7615 36 +    109717 taa--ccaac-gttt-------ta-ttc----------tc----ta-tttg--tg-t--atatt----tga
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               11989 36 +     16540 taa--ccaac-gttt-------ta-ttc----------tc----ta-tttc--tg-t--gtatt----tga
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                12266 36 +     27497 taa--ccaac-gttt-------ta-ttc----------tc----ta-tttg--tg-t--atatt----tga
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           14722 36 +     26808 taa--ccaac-gttt-------ta-ttc----------tc----ta-tttc--tg-t--gtatt----tga
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                29456 36 +     46535 taa--ccaac-gttt-------ta-ttc----------tc----ta-tttg--tg-t--atatt----tga
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              12179 36 -     29447 taa--ccaac-gttt-------ta-ttc----------tc----ta-tttc--tg-t--gtatt----tga
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129889242  4 - 159252932 --------------------------------------------------------------tt----ta-
i Felis_catus.CM001386.2                                N 0 C 0
s Felis_catus_fca126.CM031420.1                         129276316  4 - 158578461 --------------------------------------------------------------tt----ta-
i Felis_catus_fca126.CM031420.1                         N 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 17451  4 +     52776 --------------------------------------------------------------TT----TA-
i Felis_nigripes.FelNig_flattened_line_8080             N 0 C 0
s Fukomys_damarensis.KN123630.1                          13889429 19 -  19261668 --------------------------------------tc----tc-tgta--tg-a--acatt----caa
i Fukomys_damarensis.KN123630.1                         I 12 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               152643 37 +    324696 taa--ccacactttt-------ta-ttc----------tc----ta-tctc--tg-t--ATATT----CAA
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    177919  3 -    189561 --------------------------------------------------------------TT----C--
i Giraffa_tippelskirchi.LVKQ01S012154.1                 N 0 I 1
s Glis_glis.GliGli_scaffold_79770                            9088 34 -     18683 taa-tt---a-ccat-------tt-tac----------tc----ta-tcat--ta-t--gcatt----caa
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               1517 36 -     14630 aga--ccact-gttt-------ta-tac----------cc----tt-tctc--tg-t--gtatt----taa
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119648615 36 - 195582420 aga--ccact-gttt-------ta-tac----------cc----ta-tctc--tg-t--gtatt----taa
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   73645 34 +    118900 TCA-TC---A-CCAT-------TT-TAC----------TC----TA-TCAC--TA-T--GCATC----CAA
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                         1948 36 +      3980 taa--ccaac-gttt-------ta-ttc----------tc----ta-tttc--tg-t--gtatt----aga
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             24428 36 +     26611 taa--ccaac-gttt-------ta-ttc----------tc----ta-tttc--tg-t--gtatt----aga
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             1882 36 +     56096 taa--ccaac-gttt-------ta-ttc----------tc----ta-tttc--tg-t--gtatt----aga
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        25155 36 -     42470 taa--ccaac-gttt-------ta-ttc----------tc----ta-tttc--tg-t--gtatt----aga
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        41752 36 -     54384 taa--ccaac-gttt-------ta-ttc----------tc----ta-tttc--tg-t--gtatt----aga
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              13217  4 +     53719 --------------------------------------------------------------CG----CA-
i Helogale_parvula.HelPar_flattened_line_22962          N 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                24273  3 -     91191 --------------------------------------------------------------TT----C--
i Hemitragus_hylocrius.HemHyl_scaffold_16669            N 0 I 1
s Heterocephalus_glaber.JH602058.1                        2547537 19 +  31725842 --------------------------------------TC----TA-TATA--TG-T--ACATT----caa
i Heterocephalus_glaber.JH602058.1                      I 135 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               52966  6 +     73687 ------------------------------------------------------------AGAC----TA-
i Heterohyrax_brucei.HetBruBak_scaffold_25354           N 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              143973  4 +    277961 --------------------------------------------------------------TT----CG-
i Hippopotamus_amphibius.HipAmp_scaffold_1308           N 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      275390  4 -    477199 --------------------------------------------------------------TT----CA-
i Hipposideros_armiger.JXIK01001085.1                   N 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              4545  4 -      9143 --------------------------------------------------------------TT----CA-
i Hipposideros_galeritus.HipGal_scaffold_104691         N 0 C 0
s Hoolock_leuconedys.ctg649                                    98189 36 +    115816 taa--ccact-gttt-------ta-tac----------cc----tg-tctc--tg-t--gtatt----taa
i Hoolock_leuconedys.ctg649                                C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 12561  4 -     67322 --------------------------------------------------------------CT----TA-
i Hyaena_hyaena.HyaHya_flattened_line_20729             N 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16278 13 -    119109 ATA-ATGTCA-GTTT--------------------------------------------------------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 I 1
s Hylobates_abbotti.k141_493872                              1326 36 +      5897 taa--ccact-gttt-------ta-tac----------cc----tg-tctc--tg-t--gtatt----taa
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_282275                                539 36 +      1846 taa--ccact-gttt-------ta-tac----------cc----tg-tctc--tg-t--gtatt----taa
i Hylobates_agilis.k141_282275                          C 0 C 0
s Hylobates_klossii.k141_466549                              7784 36 +     11537 taa--ccact-gttt-------ta-tac----------tc----tg-tctc--tg-t--gtatt----taa
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_muelleri.k141_1133650                             761 36 -      2775 taa--ccact-gttt-------ta-tac----------cc----tg-tctc--tg-t--gtatt----taa
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     2504 37 +     22540 ATA-ATGACA-GTTT-------TC-TTC----------TC----TA-TCTA--TG-T--ACATT----CAA
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7122221  7 +  13083262 ----------------------tt-ttt----------tt-------------------------------
i Ictidomys_tridecemlineatus.JH393315.1                 I 4 I 1
s Indri_indri.k141_3334527                                   8392 36 +      9207 tag--ccaac-attt-------ta-ttc----------tc----ta-tttc--tg-c--gtatt----tga
i Indri_indri.k141_3334527                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               5632  3 +     17520 ---------------------------------------------------------------T----CA-
i Inia_geoffrensis.IniGeo_flattened_line_66725          N 0 C 0
s Jaculus_jaculus.JH725517.1                              8561772 22 +  11848649 --------------------------GG----------TC----TA-CTTC--TATT--ATGTT----CAT
i Jaculus_jaculus.JH725517.1                            I 6 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               20464  3 +     37189 ---------------------------------------------------------------T----CA-
i Kogia_breviceps.KogBre_flattened_line_35920           N 0 C 0
s Lagothrix_lagothricha.k141_12968                          46243 35 -    147782 taa--tcact-gttt-------ta-tac----------tc----ta-tctc--t--t--gtatt----caa
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   110582  4 -    115756 --------------------------------------------------------------TT----CA-
i Lasiurus_borealis.LasBor_scaffold_5102                N 0 C 0
s Lemur_catta.scaffold_1                                258403431 36 - 285822530 taa--ccaac-gttt-------ta-ttc----------tc----ta-tttc--tg-t--gtatt----aga
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        20325 36 +     39228 taa--ccaac-gttt-------ta-ttc----------tc----ta-tttc--tg-t--gtatt----tga
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            49701 36 +     63517 taa--ccagt-gttt-------ta-ttc----------tc----ta-tttc--tg-t--gtatt----tga
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        74921 36 +    116806 taa--ccagt-gttt-------ta-ttc----------tc----ta-tttc--tg-t--gtatt----tga
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     27961 36 -     33031 taa--ccaac-gttt-------ta-ttc----------tc----ta-tttc--tg-t--gtatt----tga
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3082263  4 -   3498232 --------------------------------------------------------------TT----CA-
i Leptonychotes_weddellii.KB714749.1                    N 0 C 0
s Lipotes_vexillifer.KE558548.1                            132811  3 +   3060487 ---------------------------------------------------------------T----CA-
i Lipotes_vexillifer.KE558548.1                         N 0 C 0
s Lophocebus_aterrimus.ctg55                             19244029 36 +  19376315 taa--cccct-gttt-------ta-tac----------tc----ta-tctc--tg-t--gtatt----taa
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            6942 26 +     84689 -------------tt-------ta-ttc----------tc----ta-tatc--at-t--gtgtt----tga
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3774701 26 +   6799190 -------------tt-------ta-ttc----------tc----ta-tatc--at-t--gtgtt----tga
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20587541  6 -  62548349 ------------------------------------------------------------AGCT----CA-
i Loxodonta_africana.GL010040.1                         N 0 C 0
s Lycaon_pictus.CM007556.1                               11083627  4 +  39895028 --------------------------------------------------------------TT----CG-
i Lycaon_pictus.CM007556.1                              N 0 C 0
s Macaca_arctoides.k141_2201161                             15715 36 +     74745 taa--cccct-gttt-------ta-tac----------tc----ta-tctc--tg-t--gtatt----tag
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12702221 36 +  12821369 taa--cccct-gttt-------ta-tac----------tc----ta-tctc--tg-t--gtatt----tag
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               4314 36 +      6569 taa--cccct-gttt-------ta-tac----------tc----ta-tctc--tg-t--gtatt----tag
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           42614 36 +     63263 taa--cccct-gttt-------ta-tac----------tc----ta-tctc--tg-t--gtatt----tag
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_1068107                               11191 36 +     12679 taa--cccct-gttt-------ta-tac----------tc----ta-tctc--tg-t--gtatt----tag
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                 764 36 +      3017 taa--cccct-gttt-------ta-tac----------tc----ta-tctc--tg-t--gtatt----tag
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  42376 36 -     79256 taa--cccct-gttt-------ta-tac----------tc----ta-tctc--tg-t--gtatt----tag
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196031296 36 + 196197964 taa--ccctT-GTTT-------TA-TAC----------TC----TA-TCTC--TG-T--GTAtt----tag
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11441400 36 +  11645122 taa--ccccT-GTTT-------TA-TAC----------TC----TA-TCTC--TG-T--GTatt----tag
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   1326 36 -     46448 taa--cccct-gttt-------ta-tac----------tc----ta-tctc--tg-t--gtatt----tag
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                1153 36 -      3617 taa--cccct-gttt-------ta-tac----------tc----ta-tctc--tg-t--gtatt----tag
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 11486 36 -     55006 taa--cccct-gttt-------ta-tac----------tc----ta-tctc--tg-t--gtatt----tag
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43836525 36 +  43892939 taa--cccct-gttt-------ta-tac----------tc----ta-tctc--tg-t--gtatt----tag
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                3748 36 -      5978 taa--cccct-gttt-------ta-tac----------tc----ta-tctc--tg-t--gtatt----tag
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               1328 36 -     27140 taa--cccct-gttt-------ta-tac----------tc----ta-tctc--tg-t--gtatt----tag
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43433189 36 -  43563597 taa--cccct-gttt-------ta-tac----------tc----ca-tctc--tg-t--gtatt----taa
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4446015 36 -   4543643 taa--cccct-gttt-------ta-tac----------tc----ca-tctc--tg-t--gtatt----taa
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            142876  4 +    252755 --------------------------------------------------------------TC----CA-
i Manis_javanica.JSZB01003966.1                         N 0 C 0
s Manis_pentadactyla.KN017078.1                             32941  4 +     58827 --------------------------------------------------------------TC----CA-
i Manis_pentadactyla.KN017078.1                         N 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       61368  4 -    234502 --------------------------------------------------------------TC----CA-
i Megaderma_lyra.MegLyr_scaffold_3562                   N 0 C 0
s Mellivora_capensis.MelCap_flattened_line_1828            224461  4 -    226874 --------------------------------------------------------------AT----CA-
i Mellivora_capensis.MelCap_flattened_line_1828         N 0 C 0
s Marmota_marmota.CZRN01000005.1                         36870065  9 +  64221397 ----------------------tt-ttt----------tt----tt-------------------------
i Marmota_marmota.CZRN01000005.1                        I 4 I 2
s Meriones_unguiculatus.MerUng_scaffold_52233                7983 21 +     15977 --------------------------TA----------TC----TA-TCTC--TA-T--AAATT----TAA
i Meriones_unguiculatus.MerUng_scaffold_52233           I 17 C 0
s Mesocricetus_auratus.KB708139.1                         1042918 20 -  26018355 --------------------------ca----------tc----ta-cctc--ta-t--gaatt----CA-
i Mesocricetus_auratus.KB708139.1                       I 7 C 0
s Mesoplodon_bidens.MesBid_scaffold_183284                    503  3 +      2166 ---------------------------------------------------------------T----CA-
i Mesoplodon_bidens.MesBid_scaffold_183284              N 0 C 0
s Microcebus_murinus.CM007691.1                          16506546 36 +  47401472 TAG--CCAat-cttt-------ta-ttc----------tc----ta-tttc--tg-t--gtatt----tga
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  27682 10 -     48017 ------------------------------------------------------------CATTTAATTG-
i Microgale_talazaci.MicTal_scaffold_34660              N 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               19556  4 -     32043 --------------------------------------------------------------TT----CA-
i Micronycteris_hirsuta.MicHir_scaffold_37978           N 0 C 0
s Microtus_ochrogaster.CM001673.1                        22815283 20 -  98408828 --------------------------TA----------TC----TA-TCTC--TA-T--GAATT----CT-
i Microtus_ochrogaster.CM001673.1                       I 6 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8206295  4 +  10048721 --------------------------------------------------------------TT----CA-
i Miniopterus_natalensis.LDJU01000022.1                 N 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            30972  4 +     45743 --------------------------------------------------------------TT----TA-
i Miniopterus_schreibersii.MinSch_scaffold_24116        N 0 C 0
s Miopithecus_ogouensis.k141_2666161                        31863 36 +     34273 taa--cccct-gttt-------ta-tac----------tc----ta-tctc--tg-t--gtatt----taa
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         7561  4 -    104932 --------------------------------------------------------------TT----CA-
i Mirounga_angustirostris.MirAng_flattened_line_8852    N 0 C 0
s Mirza_zaza.k141_226143                                     1960 36 +      8497 taa--ccaac-cttt-------ta-ttc----------tc----ta-tttc--tg-t--gtatc----tga
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 143230  3 +    154973 ---------------------------------------------------------------T----CA-
i Monodon_monoceros.MonMon_M_scaffold_5598              N 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                157876  4 +    265003 --------------------------------------------------------------TT----CA-
i Mormoops_blainvillei.MorMeg_scaffold_2952             N 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 1503  3 -      4346 --------------------------------------------------------------TT----C--
i Moschus_moschiferus.MosMos_scaffold_146101            N 0 I 1
s Mungos_mungo.MunMun_flattened_line_8729                  140912  4 -    168139 --------------------------------------------------------------CG----CA-
i Mungos_mungo.MunMun_flattened_line_8729               N 0 C 0
s Murina_feae.MurFea_scaffold_2254                          16093  4 -    100666 --------------------------------------------------------------TT----CA-
i Murina_feae.MurFea_scaffold_2254                      N 0 C 0
s Mus_caroli.LT608236.1                                  70761448 21 +  92629107 --------------------------TA----------TC----AA-TATC--TA-T--TAACT----CAA
i Mus_caroli.LT608236.1                                 I 17 C 0
s Mus_musculus.chr16                                     75484523 21 +  98207768 --------------------------TA----------TC----AA-TATC--TA-T--TAACT----CAA
i Mus_musculus.chr16                                    I 17 C 0
s Mus_pahari.LT608305.1                                  67549062 21 +  89017189 --------------------------TA----------TC----AA-TATC--TA-T--AAACT----CAA
i Mus_pahari.LT608305.1                                 I 17 C 0
s Mus_spretus.CM004110.1                                 74324161 21 +  97876770 --------------------------TA----------TC----AA-TATC--TA-T--TAACT----CAA
i Mus_spretus.CM004110.1                                I 17 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              6968 32 +     98495 -----------ccac-------tt-tac----------tctttcta-ccac--ta-t--acatt----caa
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 6 C 0
s Mustela_putorius.JH417978.1                             4419314  4 -  28371801 --------------------------------------------------------------TT----CA-
i Mustela_putorius.JH417978.1                           N 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     86454 11 -    117718 -----------------------------------------------------TG-T--ACATT----CAA
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 16 C 0
s Myotis_brandtii.KE161952.1                               964421  4 +   8389877 --------------------------------------------------------------TT----CA-
i Myotis_brandtii.KE161952.1                            N 0 C 0
s Myotis_davidii.KB114863.1                               5016098  4 +   6462685 --------------------------------------------------------------TT----CA-
i Myotis_davidii.KB114863.1                             N 0 C 0
s Myotis_lucifugus.GL429887.1                             3462007  4 -   3747815 --------------------------------------------------------------TT----CA-
i Myotis_lucifugus.GL429887.1                           N 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         7204  4 +     66751 --------------------------------------------------------------TT----CA-
i Myotis_myotis.MyoMyo_scaffold_6123                    N 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             1956  6 -      8794 ------------------------------------------------------------TGCT----CA-
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        N 0 C 0
s Nannospalax_galili.KL201303.1                            107243 21 +    362372 --------------------------ca----------tt----ta-tttc--ta-t--aaatt----taa
i Nannospalax_galili.KL201303.1                         I 7 C 0
s Nasalis_larvatus.k141_153429                               4236 28 +     48152 -----------gttt-------ta-tac----------tc----ta-tctc--tg-t--gtatt----taa
i Nasalis_larvatus.k141_153429                          I 8 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4481162  4 -  14209539 --------------------------------------------------------------TT----CA-
i Neomonachus_schauinslandi.NINY01007774.1              N 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3947839  3 -   4490290 ---------------------------------------------------------------T----CA-
i Neophocaena_asiaeorientalis.KZ688543.1                N 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  46209  4 +     94413 --------------------------------------------------------------TT----CA-
i Noctilio_leporinus.NocLep_scaffold_12062              N 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                26623  4 +   3668941 --------------------------------------------------------------TT----CG-
i Nyctereutes_procyonoides.CAJHUB010000786.1            N 0 C 0
s Nycticebus_bengalensis.LG16                            65563290 26 -  95554990 -------------tt-------ta-ttc----------tc----ta-tatc--at-t--gtgtt----tga
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_7268257                            2305 26 -      2537 -------------tt-------ta-ttc----------tc----ta-tatc--at-t--gtgtt----tga
i Nycticebus_coucang.k141_7268257                       C 0 n 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65665653 26 +  89412551 -------------tt-------ta-ttc----------tc----ta-tatc--at-t--gtgtt----tga
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Octodon_degus.JH651621.1                                3674996 19 +  10294119 --------------------------------------------AA-TATG--TG-TATAGAAA----Caa
i Octodon_degus.JH651621.1                              I 20 C 0
s Odobenus_rosmarus.KB229369.1                             675846  4 -   3126709 --------------------------------------------------------------TT----CA-
i Odobenus_rosmarus.KB229369.1                          N 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1076629  3 +   1425656 --------------------------------------------------------------TC----C--
i Odocoileus_virginianus.KZ101650.1                     N 0 I 1
s Okapia_johnstoni.LVCL01S0017931.1                         33791  3 +     78940 --------------------------------------------------------------TT----C--
i Okapia_johnstoni.LVCL01S0017931.1                     N 0 I 1
s Ondatra_zibethicus.OndZib_scaffold_6821                  121101 20 +    145789 --------------------------TA----------TA----TA-TCTC--AA-T--GAATT----CC-
i Ondatra_zibethicus.OndZib_scaffold_6821               I 6 I 5
s Onychomys_torridus.OnyTor_scaffold_12578                  33040 16 +     62360 --------------------------------------------CA-TCTC--TA-T--GAATT----CA-
i Onychomys_torridus.OnyTor_scaffold_12578              I 4 C 0
s Orcinus_orca.KB316965.1                                 7221523  3 -   7562323 ---------------------------------------------------------------T----CA-
i Orcinus_orca.KB316965.1                               N 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              39754  6 -     66828 ------------------------------------------------------------CCTT----CA-
i Orycteropus_afer.OryAfe_flattened_line_13509          N 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      303958  4 -    505867 --------------------------------------------------------------TT----CA-
i Otocyon_megalotis.JAEUCK010005121.1                   N 0 C 0
s Ovis_aries.CM001582.2                                 134074074  3 - 275406953 --------------------------------------------------------------TT----C--
i Ovis_aries.CM001582.2                                 N 0 I 1
s Ovis_canadensis.OviCan_scaffold_6251                      75288  3 +    140051 --------------------------------------------------------------TT----C--
i Ovis_canadensis.OviCan_scaffold_6251                  N 0 I 1
s Pan_paniscus.AJFE02005303.1                                 887 36 +      1263 taa--ccact-gttt-------ta-taC----------TC----TA-TCTC--tg-t--gtatt----taa
i Pan_paniscus.AJFE02005303.1                           I 497 I 169
s Pan_troglodytes.KZ622853.1                               258573 36 +    258671 taa--ccact-gttt-------ta-taC----------TC----TA-TCTC--TG-T--Gtatt----taa
i Pan_troglodytes.KZ622853.1                            I 79 I 2
s Panthera_onca.PanOnc_flattened_line_1615                  30405  4 +    295523 --------------------------------------------------------------TT----TA-
i Panthera_onca.PanOnc_flattened_line_1615              N 0 C 0
s Panthera_pardus.KV860323.1                              3634009  4 +  18214204 --------------------------------------------------------------tt----ta-
i Panthera_pardus.KV860323.1                            N 0 C 0
s Panthera_tigris.KE721879.1                              5023786  4 -   6340057 --------------------------------------------------------------tt----ta-
i Panthera_tigris.KE721879.1                            N 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1062789  3 -   1292953 --------------------------------------------------------------TC----C--
i Pantholops_hodgsonii.KE114631.1                       N 0 I 1
s Papio_anubis.CM001492.2                               188151974 36 - 188283584 taa--ccccT-GTTT-------TA-TAC----------TC----TA-TCTC--tg-t--gtatt----taa
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            48186 36 +     76494 taa--cccct-gttt-------ta-tac----------tc----ta-tctc--tg-t--gtatt----taa
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47509370 36 +  47705337 taa--cccct-gttt-------ta-tac----------tc----ta-tctc--tg-t--gtatt----taa
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 63353 36 -    104429 taa--cccct-gttt-------ta-tac----------tc----ta-tctc--tg-t--gtatt----taa
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  13137 36 -     29451 taa--cccct-gttt-------ta-tac----------tc----ta-tctc--tg-t--gtatt----taa
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                33542 36 +     35859 taa--cccct-gttt-------ta-tac----------tc----ta-tctc--tg-t--gtatt----taa
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    111736  4 -    135482 --------------------------------------------------------------TT----TA-
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 N 0 C 0
s Perodicticus_ibeanus.k141_117958                           1297 22 -     23713 -------------------------ttc----------tc----ta-tgtc--at-t--gtgtt----tga
i Perodicticus_ibeanus.k141_117958                      I 2 C 0
s Perodicticus_potto.k141_713187                            20594 22 -     27972 -------------------------ttc----------tc----ta-tatc--at-t--gtgtt----tga
i Perodicticus_potto.k141_713187                        I 2 C 0
s Peromyscus_maniculatus.KI615518.1                       4946205 20 -   8017169 --------------------------CA----------TC----CA-TCTC--TA-T--GAATT----CA-
i Peromyscus_maniculatus.KI615518.1                     I 7 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            118140  3 -    122454 ---------------------------------------------------------------T----CA-
i Phocoena_phocoena.PhoPho_flattened_line_11948         N 0 C 0
s Piliocolobus_badius.k141_1497351                           1229 36 -      3310 taa--cccct-gttt-------ta-tac----------tc----ta-tctc--tg-t--gtatt----taa
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       21135 36 -     82327 taa--cccct-gttt-------ta-tac----------tc----ta-tctc--tg-t--gtatt----taa
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           17886 36 +     19957 taa--cccct-gttt-------ta-tac----------tc----ta-tctc--tg-t--gtatt----taa
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26735895 36 +  26888534 taa--ccccT-GTTT-------TA-TAC----------TC----TA-TCTC--Tg-t--gtatt----taa
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            93198  4 +    112873 --------------------------------------------------------------TT----CA-
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        N 0 C 0
s Pithecia_albicans.k141_991845                             39770 35 -     61926 taa--tcact-gttt-------ta-tac----------ac----ta-tctc--t--t--gtatt----caa
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        21199 35 +     78826 taa--tcact-gttt-------ta-tac----------ac----ta-tctc--t--t--gtatt----caa
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              5150 35 -     15800 taa--tcact-gttt-------ta-tac----------ac----ta-tctc--t--t--gtatt----caa
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                         8348 35 -     16101 taa--tcact-gttt-------ta-tac----------ac----ta-tctc--t--t--gtatt----caa
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          1657 35 +      9673 taa--tcact-gttt-------ta-tac----------ac----ta-tctc--t--t--gtatt----caa
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13470651 35 -  19735023 taa--tcact-gttt-------ta-tac----------ac----ta-tctc--t--t--gtatt----caa
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                            9559 35 -     31692 taa--tcact-gttt-------ta-tac----------ac----ta-tctc--t--t--gtatt----caa
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           2207  3 +     21690 ---------------------------------------------------------------T----CA-
i Platanista_gangetica.PlaMin_flattened_line_72990      N 0 C 0
s Plecturocebus_bernhardi.k141_959214                       18923 35 +     44506 taa--tcact-gtgt-------ta-tac----------tt----ta-tctg--t--t--gtatt----caa
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        19141 35 +     67491 taa--tcact-gtgt-------ta-tac----------tc----ta-tctg--t--t--gtatt----caa
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                       9386 35 -     98129 taa--tcact-gtgt-------ta-tac----------tc----ta-tctg--t--t--gtatt----caa
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     18986 35 +    147771 taa--tcact-gtgt-------ta-tac----------tc----ta-tttg--t--t--gtatt----caa
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        19237 35 -     23762 taa--tcact-gtgt-------ta-tac----------tc----ta-tctg--t--t--gtatt----caa
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_2078842                         19185 35 -     19696 taa--tcact-gtgt-------ta-tac----------tc----ta-tctg--t--t--gtatt----caa
i Plecturocebus_dubius.k141_2078842                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         19059 35 +    152463 taa--tcact-gtgt-------ta-tac----------tt----ta-tctg--t--t--gtatt----caa
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      5816 35 +      8943 taa--tcact-gtgt-------ta-tac----------tc----ta-tctg--t--t--gtatt----caa
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                          8776 35 +    134592 taa--tcact-gtgt-------ta-tac----------tc----ta-tctg--t--t--gtatt----caa
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          19369 35 -     75465 taa--tcact-gtgt-------ta-tac----------tt----ta-tctg--t--t--gtatt----caa
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              183412 36 -    373494 aaa--ccact-gttT-------AA-TAC----------CC----TA-TCTC--TG-T--GTATT----Taa
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19803315 37 +  19899266 aaa--ccact-gttt-------taatac----------cc----ta-tctc--tg-t--gtatt----taa
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               1465 36 -     15069 taa--cccct-gttt-------ta-tac----------tc----ta-tctc--tg-t--gtatt----taa
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              1599 36 +     14865 taa--cccct-gttt-------ta-tac----------tc----ta-tctc--tg-t--gtatt----taa
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                72830  6 +     78963 ------------------------------------------------------------AGAC----TA-
i Procavia_capensis.ProCapCap_scaffold_15315            N 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6844804 36 +  12164890 TAA--CCAAc-gttt-------ta-ttc----------tc----ta-tttc--tg-t--gTATT----AGA
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     13239 36 -     30946 TAG--CCaac-attt-------ta-ttc----------tc----ta-tttc--tg-t--gtatt----tga
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_diadema.k141_577245                           39274 36 +     52369 tag--ccaat-gttt-------ta-ttc----------tc----tg-tttc--tg-t--gtatt----tga
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         31663 36 -     44753 tag--ccaat-gttt-------ta-ttc----------tc----tg-tttc--tg-t--gtatt----tga
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            13585 36 +     27322 tag--ccaat-gttt-------ta-ttc----------tc----tg-tttc--tg-t--gtatt----tga
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       13229 36 -     53241 tag--ccaac-gttt-------ta-ttc----------tc----tg-tttc--tg-t--gtatt----tga
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         35500 36 -     48185 tag--ccaac-attt-------ta-ttc----------tc----ta-tttc--tg-t--gtatt----tga
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           29044 21 +     77221 --------------------------ta----------tc----ta-tttc--ta-t--aaatt----taa
i Psammomys_obesus.NESX01026517.1                       I 17 C 0
s Pteronotus_parnellii.KE867983.1                             766  4 -     27784 --------------------------------------------------------------tt----ca-
i Pteronotus_parnellii.KE867983.1                       N 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        241171  4 -    344369 --------------------------------------------------------------TT----CA-
i Pteronura_brasiliensis.PteBra_flattened_line_1343     N 0 C 0
s Pteropus_alecto.KB031157.1                             13242870  4 -  17261082 --------------------------------------------------------------TT----CA-
i Pteropus_alecto.KB031157.1                            N 0 C 0
s Pteropus_vampyrus.KN525959.1                             600824  4 -   3946241 --------------------------------------------------------------TT----CA-
i Pteropus_vampyrus.KN525959.1                          N 0 C 0
s Puma_concolor.QAVW01000427.1                          131530602  4 - 161321710 --------------------------------------------------------------tt----ta-
i Puma_concolor.QAVW01000427.1                          N 0 C 0
s Pygathrix_cinerea.k141_374971                             25590 36 +     56732 taa--cccct-gtgt-------ta-tac----------tc----ta-tctc--tg-t--gtatt----taa
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6802080 36 +   6970761 taa--ccccc-gtgt-------ta-tac----------tc----ta-tctc--tg-t--gtatt----taa
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             1472 36 +     18040 taa--cccct-gtgt-------ta-tac----------tc----ta-tctc--tg-t--gtatt----taa
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                12715  3 +     68503 --------------------------------------------------------------TC----C--
i Rangifer_tarandus.RanTarSib_scaffold_24239            N 0 I 1
s Rattus_norvegicus.chr11                                13910988 21 +  90463843 --------------------------TA----------TC----AA-TATC--TA-T--GAATT----CAA
i Rattus_norvegicus.chr11                               I 17 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1784472  4 +   2252614 --------------------------------------------------------------tt----ca-
i Rhinolophus_sinicus.LVEH01000179.1                    N 0 C 0
s Rhinopithecus_bieti.k119_102124                           12027 36 -     14454 taa--cccct-gttt-------ta-tac----------tc----ta-tctc--tg-t--gtatt----taa
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206373353 36 - 206558726 TAA--CCCCT-GTTT-------TA-TAC----------TC----TA-TCTC--TG-t--gtatt----taa
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44851001 36 -  45163003 taa--cccct-gttt-------ta-tac----------tc----ta-tctc--tg-t--gtatt----taa
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                16173  4 +    109198 --------------------------------------------------------------TT----CA-
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            N 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       4361  3 +     12214 --------------------------------------------------------------TT----C--
i Saiga_tatarica.SaiTat_scaffold_82192                  N 0 I 1
s Saimiri_boliviensis.NW_024100938.1                     15668794 35 -  43202129 taa--tcaGT-GTTT-------TA-TAC----------TC----TA-TCTC--T--T--GTATT----caa
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                         669 35 +     34089 taa--tcagt-gttt-------ta-tac----------tc----ta-tctc--t--t--gtatt----caa
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                               600 35 -     60842 taa--tcagt-gttt-------ta-tac----------tc----ta-tctc--t--t--gtatt----caa
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                               669 35 +     67014 taa--tcagt-gttt-------ta-tac----------tc----ta-tctc--t--t--gtatt----caa
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                               669 35 +     60816 taa--tcagt-gttt-------ta-tac----------tc----ta-tctc--t--t--gtatt----caa
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                  597 35 -     76454 taa--tcagt-gttt-------ta-tac----------tc----ta-tctc--t--t--gtatt----caa
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17337177 35 -  30362882 taa--tcagt-gttt-------ta-tac----------tc----ta-tctc--t--t--gtatt----caa
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         16778 35 -     62485 taa--tcagt-gttt-------ta-tac----------tc----ta-tctc--t--t--gtatt----caa
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   28263  3 -    114521 ---------------------------------------------------------------T----CA-
i Scalopus_aquaticus.ScaAqu_scaffold_9300               N 0 C 0
s Semnopithecus_entellus.k141_1527475                       24015 36 +     26421 taa--cccct-gttt-------ta-tac----------tc----ta-tctc--tg-t--gtatt----taa
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       4477 36 +     20762 taa--cccct-gttt-------ta-tac----------tc----ta-tctc--tg-t--gtatt----taa
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         38210 36 +     40653 taa--cccct-gttt-------ta-tac----------tc----ta-tctc--tg-t--gtttt----taa
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                            8769 36 -     12194 taa--cccct-gttt-------ta-tac----------tc----ta-tctc--tg-t--gtatt----taa
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     22188 36 -     27512 taa--cccct-gttt-------ta-tac----------tc----ta-tctc--tg-t--gtatt----taa
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         31209 36 -     33692 taa--cccct-gttt-------ta-tac----------tc----ta-tctc--tg-t--gtatt----taa
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   94288 20 -    120886 --------------------------CA----------TT----TA-TCTC--TA-T--GAATT----CA-
i Sigmodon_hispidus.SigHis_scaffold_11332               I 7 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            14489  3 +    739146 ---------------------------------------------------------------T----TG-
i Solenodon_paradoxus.SolPar_flattened_line_1012        N 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             230888  4 -    276980 --------------------------------------------------------------TG----CA-
i Spilogale_gracilis.SpiGra_flattened_line_905          N 0 C 0
s Sus_scrofa.CM000824.4                                 189268780  4 + 218635234 --------------------------------------------------------------CT----CA-
i Sus_scrofa.CM000824.4                                 N 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2236147  7 +   2842873 ----------------------tt-ttt----------tt-------------------------------
i Spermophilus_dauricus.KZ294190.1                      I 4 I 1
s Symphalangus_syndactylus.tarseq_24                        11127 36 -  13920577 taa--ccact-gttt-------ta-tac----------cc----tg-tctc--tg-t--gtatt----taa
i Symphalangus_syndactylus.tarseq_24                    I 79 I 10
s Tadarida_brasiliensis.TadBra_scaffold_145589               2694  4 -      6213 --------------------------------------------------------------TT----TA-
i Tadarida_brasiliensis.TadBra_scaffold_145589          N 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               11634  6 +     45698 ------------------------------------------------------------TGCT----CA-
i Tamandua_tetradactyla.TamTet_scaffold_26877           N 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      803633  4 +   1148477 --------------------------------------------------------------TT----CA-
i Tapirus_indicus.TapInd_scaffold_176                   N 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  54292  4 +     99546 --------------------------------------------------------------TT----CA-
i Tapirus_terrestris.TapTer_scaffold_14939              N 0 C 0
s Tarsius_lariang.k141_609102                               22926 38 +     42269 taa--ccact-gttt-------ta-ttc----------tc----tg-tctctgtg-t--gtact----tga
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               56234 38 +     65473 taa--ccact-gttt-------ta-ttc----------tc----tg-tctctgtg-t--gtact----tga
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194003509 36 - 194193292 taA--CCCCT-GTTT-------TA-TAC----------TC----TA-TCTC--tg-t--gtatt----taa
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                   500  6 +      6782 ------------------------------------------------------------TGCT----TG-
i Tolypeutes_matacus.TolMat_scaffold_269431             N 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  132769  4 -    259118 --------------------------------------------------------------TT----CA-
i Tonatia_saurophila.TonSau_scaffold_3334               N 0 C 0
s Trachypithecus_auratus.k141_738098                        22587 36 +     38948 taa--cccct-gttt-------ta-tac----------tc----ta-tctc--tg-t--gtatt----taa
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   16314 36 -     32910 taa--cccct-gttt-------ta-tac----------tc----ta-tctc--tg-t--gtatt----taa
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       22212 36 +     24652 taa--cccct-gttt-------ta-tac----------tc----ta-tctc--tg-t--gtatt----taa
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      1097 36 -      3559 taa--cccct-gttt-------ta-tac----------tc----ta-tctc--tg-t--gtatt----taa
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           39036 36 -     54611 taa--cccct-gttt-------ta-tac----------tc----ta-tctc--tg-t--gtatt----taa
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       15035 36 +     17312 taa--cccct-gttt-------ta-tac----------tc----ta-tctc--tg-t--gtatt----taa
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    22405 36 -     25040 taa--cccct-gttt-------ta-tac----------tc----ta-tctc--tg-t--gtatt----taa
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          1071 36 +      3528 taa--cccct-gttt-------ta-tac----------tc----ta-tctc--tg-t--gtatt----taa
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  47433 36 +     51589 taa--cccct-gttt-------ta-tac----------tc----ta-tctc--tg-t--gtatt----taa
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       10601 36 +     14732 taa--cccct-gttt-------ta-tac----------tc----ta-tctc--tg-t--gtatt----taa
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       1079 36 -     28054 taa--cccct-gttt-------ta-tac----------tc----ta-tctc--tg-t--gtatt----taa
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44655874 36 -  44834318 taa--cccct-gttt-------ta-tac----------tc----ta-tctc--tg-t--gtatt----taa
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                         884 36 +      3372 taa--cccct-gttt-------ta-tac----------tc----ta-tctc--tg-t--gtatt----taa
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   2126  3 +     90398 --------------------------------------------------------------TC----C--
i Tragulus_javanicus.TraJav_scaffold_14717              N 0 C 0
s Trichechus_manatus.JH594618.1                          16078222  6 +  31416278 ------------------------------------------------------------AGAT----CA-
i Trichechus_manatus.JH594618.1                         N 0 C 0
s Tupaia_chinensis.KB320831.1                             2787086 37 -   3938065 taa-tccaac-gtta-------ta-ttc----------tc----aa-tctc--tg-t--gcatt----tga
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_3657864                    76 37 +       342 taa-tccaac-gcta-------ta-ttc----------tc----aa-tctc--tg-t--gcatt----tga
i Tupaia_tana.TupTan_flattened_line_3657864             C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69310241  3 -  96451834 ---------------------------------------------------------------T----CA-
i Tursiops_truncatus.MRVK01000923.1                     N 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 23451  3 -     25548 ---------------------------------------------------------------T----CA-
i Uropsilus_gracilis.UroGra_scaffold_4143_0             N 0 C 0
s Ursus_maritimus.KK498671.1                              6510870  4 +  28682327 --------------------------------------------------------------TT----CA-
i Ursus_maritimus.KK498671.1                            N 0 C 0
s Varecia_rubra.k141_432109                                  1750 36 -     20643 taa--ccaac-gttt-------ta-ttc----------tc----ta-tttc--tg-t--gtatt----tga
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             21295 36 -     33872 taa--ccaac-gttt-------ta-ttc----------tc----ta-tttc--tg-t--gtatt----tga
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1521553  4 -   2331223 --------------------------------------------------------------TT----CA-
i Vicugna_pacos.KN269600.1                              N 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                134023  4 -    281493 --------------------------------------------------------------TT----TG-
i Vulpes_lagopus.VulLag_flattened_line_2045             N 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        210573  4 -    227762 --------------------------------------------------------------TT----CA-
i Zalophus_californianus.ZalCal_flattened_line_4097     N 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       123338  9 -    134049 ----------------------tt-ttt----------tt----tt-------------------------
i Xerus_inauris.XerIna_scaffold_7898                    I 4 I 2
s Zapus_hudsonius.ZapHud_scaffold_64392                     12183 21 -     20485 --------------------------ca----------tc----ta-ctcC--AA-T--ATGTT----CAG
i Zapus_hudsonius.ZapHud_scaffold_64392                 I 7 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           3744  3 -      8775 ---------------------------------------------------------------T----CA-
i Ziphius_cavirostris.ZipCav_flattened_line_127025      N 0 C 0
e Hylobates_pileatus_b.LG03                                     92553610  0 - 189753342 C
e Otolemur_garnettii.GL873528.1                          18004869 68 -  38779656 I
e Otolemur_crassicaudatus.k141_321880                       35431 68 +     38679 I
e Galagoides_demidoff.k141_1769638                           6763 68 +     27357 I
e Galago_senegalensis.k141_964197                            9743 68 -     43889 I
e Galago_moholi.ctg555                                     207363 68 -    847004 I
e Nomascus_siki_b.tarseq_80                             20456  0 -  18771707 C
e Nomascus_annamensis.k141_745421                             374  0 -      4569 C
e Nomascus_gabriellae.k141_1350167                            785  0 +      9928 C

a score=0.000000
s hg38.chr4_GL000008v2_random                                8161 2 +    209709 ct
s Acomys_cahirinus.AcoCah_scaffold_1625                    108544 2 -    189883 CT
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                    8832 2 -     22067 CT
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_3103707                  59183 2 +     61638 ct
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        50991 2 +     53391 ct
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         1715 2 +     72529 ct
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          1291 2 +      3797 ct
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             6385 2 -     18050 ct
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  7502 2 -     11521 ct
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              7060 2 -     21359 ct
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1856473                                5443 2 +      7227 ct
i Alouatta_juara.k141_1856473                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          6358 2 -     10438 ct
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            3012 2 +      7047 ct
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             6296 2 +     10410 ct
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_390786                             7573 2 -      7615 ct
i Alouatta_puruensis.k141_390786                        C 0 C 0
s Alouatta_seniculus.k141_990213                             3017 2 +      6429 ct
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Aotus_azarae.k141_3170768                                 58691 2 +     78111 ct
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            1622 2 +     22701 ct
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5745582 2 +   9889416 ct
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             2174 2 -    104377 ct
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               2174 2 +     23246 ct
i Aotus_vociferans.k141_718647                          C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      14474 2 +     17483 ct
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9535435 2 +  39197703 ct
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             56723 2 +     85812 ct
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 7720 2 +     89302 ct
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             12229 2 -     58268 ct
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             60217 2 +    119057 ct
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               2168 2 -     25888 ct
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 3030 1 -     16375 c-
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_767228                               9002 1 -      9688 c-
i Avahi_peyrierasi.k141_767228                          I 4 C 0
s Cacajao_ayresi.k141_724503                               110092 2 -    171031 ct
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                  9118 2 +    125063 ct
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                11166 2 -    216513 ct
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        3705 2 -    134917 ct
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Capromys_pilorides.CapPil_scaffold_647363                   723 2 +      1887 CA
i Capromys_pilorides.CapPil_scaffold_647363             C 0 C 0
s Carlito_syrichta.NW_007248099.1                          305475 2 +    345090 GT
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Cebus_albifrons.Contig22                               18886903 2 -  29618158 gt
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 4449 2 -     26817 gt
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                 8689 2 +     25043 gt
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         4511 2 +     21754 gt
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6550979 2 +   6739814 ct
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      52456 2 -     54931 ct
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         17440 2 -     19697 ct
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         54971 2 -    107033 ct
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        1414 2 -      3853 ct
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          25346 2 +     30494 ct
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           1369 2 -      4022 ct
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          1259 2 -      3505 ct
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           20070 2 +     35983 ct
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11985846 2 +  12117833 ct
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46473342 2 +  46592721 ct
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      31169 2 +     33420 ct
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        1205 2 -      3443 ct
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      2196 2 -      4669 ct
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        2000 2 -      4411 ct
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         1520 2 -      4205 ct
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           55366 1 -     68416 c-
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            4416 1 +     13308 c-
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             1702 2 -     18223 ct
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             18725 2 +     25473 ct
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           37764 2 +     57117 ct
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          42439 2 +     54541 ct
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15957874 2 +  43084221 CT
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         67313 2 +    196370 ct
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          11487 2 +     40510 ct
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15134800 2 -  15256731 ct
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      29846 2 -     53260 ct
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101140294 2 + 101219884 ct
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10878876 2 +  10971483 ct
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147660035 2 + 156195979 ct
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            12020 2 +     23629 ct
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 273982 2 -    399297 CT
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  204705 1 -    956709 C-
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 26884 2 -     67205 CA
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16841240 1 +  31942871 c-
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Erythrocebus_patas.Contig8                             48766979 2 -  48907691 ct
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eulemur_albifrons.k141_715837                              1439 1 +     13586 c-
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               1376 1 -      6809 c-
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             7846 1 +     36558 c-
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             4163 1 +     60246 c-
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 7651 1 +    109717 c-
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               12025 1 +     16540 c-
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                12302 1 +     27497 c-
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           14758 1 +     26808 c-
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                29492 1 +     46535 c-
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              12215 1 -     29447 c-
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Fukomys_damarensis.KN123630.1                          13889448 2 -  19261668 tg
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               152680 2 +    324696 CG
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Glis_glis.GliGli_scaffold_79770                            9122 2 -     18683 ca
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               1553 2 -     14630 ct
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119648651 2 - 195582420 ct
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   73679 2 +    118900 CA
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                         1984 1 +      3980 c-
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             24464 1 +     26611 c-
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             1918 1 +     56096 c-
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        25191 1 -     42470 c-
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        41788 1 -     54384 c-
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2547556 2 +  31725842 ca
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Hoolock_leuconedys.ctg649                                    98225 2 +    115816 ct
i Hoolock_leuconedys.ctg649                                C 0 C 0
s Hylobates_abbotti.k141_493872                              1362 2 +      5897 ct
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_282275                                575 2 +      1846 ct
i Hylobates_agilis.k141_282275                          C 0 C 0
s Hylobates_klossii.k141_466549                              7820 2 +     11537 ct
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_muelleri.k141_1133650                             797 2 -      2775 ct
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     2541 2 +     22540 CA
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Indri_indri.k141_3334527                                   8428 1 +      9207 c-
i Indri_indri.k141_3334527                              C 0 C 0
s Jaculus_jaculus.JH725517.1                              8561794 2 +  11848649 CT
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Lagothrix_lagothricha.k141_12968                          46278 2 -    147782 ct
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lemur_catta.scaffold_1                                258403467 1 - 285822530 c-
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        20361 1 +     39228 c-
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            49737 1 +     63517 c-
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        74957 1 +    116806 c-
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     27997 1 -     33031 c-
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Lophocebus_aterrimus.ctg55                             19244065 2 +  19376315 ct
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            6968 2 +     84689 ct
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3774727 2 +   6799190 ct
i Loris_tardigradus.ctg97                               C 0 C 0
s Macaca_arctoides.k141_2201161                             15751 2 +     74745 ct
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12702257 2 +  12821369 ct
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               4350 2 +      6569 ct
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           42650 2 +     63263 ct
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_1068107                               11227 2 +     12679 ct
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                 800 2 +      3017 ct
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  42412 2 -     79256 ct
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196031332 2 + 196197964 ct
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11441436 2 +  11645122 ct
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   1362 2 -     46448 ct
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                1189 2 -      3617 ct
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 11522 2 -     55006 ct
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43836561 2 +  43892939 ct
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                3784 2 -      5978 ct
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               1364 2 -     27140 ct
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43433225 2 -  43563597 ct
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4446051 2 -   4543643 ct
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233                8004 2 +     15977 CT
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Microcebus_murinus.CM007691.1                          16506582 1 +  47401472 c-
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        31899 2 +     34273 ct
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirza_zaza.k141_226143                                     1996 1 +      8497 c-
i Mirza_zaza.k141_226143                                C 0 C 0
s Mus_caroli.LT608236.1                                  70761469 2 +  92629107 CT
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75484544 2 +  98207768 CT
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67549083 2 +  89017189 CT
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74324182 2 +  97876770 CT
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              7000 2 +     98495 ca
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     86465 2 -    117718 CA
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Nannospalax_galili.KL201303.1                            107264 2 +    362372 ct
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               4264 2 +     48152 ct
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Nycticebus_bengalensis.LG16                            65563316 1 -  95554990 c-
i Nycticebus_bengalensis.LG16                           C 0 I 8
s Nycticebus_coucang.k141_2051882                             154 2 +      6470 CT
i Nycticebus_coucang.k141_2051882                       I 102 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65665679 2 +  89412551 ct
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Octodon_degus.JH651621.1                                3675015 2 +  10294119 ca
i Octodon_degus.JH651621.1                              C 0 C 0
s Pan_paniscus.CM003386.1                               127570895 2 - 205426864 ct
i Pan_paniscus.CM003386.1                               I 36 I 3
s Pan_troglodytes.CM009241.2                            120148042 2 - 196562556 ct
i Pan_troglodytes.CM009241.2                            I 36 I 3
s Papio_anubis.CM001492.2                               188152010 2 - 188283584 ct
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            48222 2 +     76494 ct
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47509406 2 +  47705337 ct
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 63389 2 -    104429 ct
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  13173 2 -     29451 ct
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                33578 2 +     35859 ct
i Papio_ursinus.k141_3762866                            C 0 C 0
s Perodicticus_ibeanus.k141_117958                           1319 2 -     23713 ca
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            20616 2 -     27972 ca
i Perodicticus_potto.k141_713187                        C 0 C 0
s Piliocolobus_badius.k141_1497351                           1265 2 -      3310 ct
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       21171 2 -     82327 ct
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           17922 2 +     19957 ct
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26735931 2 +  26888534 ct
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pithecia_albicans.k141_991845                             39805 2 -     61926 ct
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        21234 2 +     78826 ct
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              5185 2 -     15800 ct
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                         8383 2 -     16101 ct
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          1692 2 +      9673 ct
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13470686 2 -  19735023 ct
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                            9594 2 -     31692 ct
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       18958 2 +     44506 ct
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        19176 2 +     67491 ct
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                       9421 2 -     98129 ct
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     19021 2 +    147771 ct
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        19272 2 -     23762 ct
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_2078842                         19220 2 -     19696 ct
i Plecturocebus_dubius.k141_2078842                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         19094 2 +    152463 ct
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      5851 2 +      8943 ct
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                          8811 2 +    134592 ct
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          19404 2 -     75465 ct
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              183448 2 -    373494 cc
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19803352 2 +  19899266 cc
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               1501 2 -     15069 ct
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              1635 2 +     14865 ct
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6844840 1 +  12164890 C-
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     13275 1 -     30946 c-
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_diadema.k141_577245                           39310 1 +     52369 c-
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         31699 1 -     44753 c-
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            13621 1 +     27322 c-
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       13265 1 -     53241 c-
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         35536 1 -     48185 c-
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           29065 2 +     77221 ct
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pygathrix_cinerea.k141_374971                             25626 2 +     56732 ct
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6802116 2 +   6970761 ct
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             1508 2 +     18040 ct
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rattus_norvegicus.chr11                                13911009 2 +  90463843 CT
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinopithecus_bieti.k119_102124                           12063 2 -     14454 ct
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206373389 2 - 206558726 ct
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44851037 2 -  45163003 ct
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15668829 2 -  43202129 ct
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                         704 2 +     34089 ct
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                               635 2 -     60842 ct
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                               704 2 +     67014 ct
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                               704 2 +     60816 ct
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                  632 2 -     76454 ct
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17337212 2 -  30362882 ct
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         16813 2 -     62485 ct
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Semnopithecus_entellus.k141_1527475                       24051 2 +     26421 ct
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       4513 2 +     20762 ct
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         38246 2 +     40653 ct
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                            8805 2 -     12194 ct
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     22224 2 -     27512 ct
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         31245 2 -     33692 ct
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Symphalangus_syndactylus.tarseq_24                     13898175 2 +  13920577 ct
i Symphalangus_syndactylus.tarseq_24                    I 36 C 0
s Tarsius_lariang.k141_609102                               22964 2 +     42269 gt
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               56272 2 +     65473 gt
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194003545 2 - 194193292 ct
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Trachypithecus_auratus.k141_738098                        22623 2 +     38948 ct
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   16350 2 -     32910 ct
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       22248 2 +     24652 ct
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      1133 2 -      3559 ct
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           39072 2 -     54611 ct
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       15071 2 +     17312 ct
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    22441 2 -     25040 ct
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          1107 2 +      3528 ct
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  47469 2 +     51589 ct
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       10637 2 +     14732 ct
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       1115 2 -     28054 ct
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44655910 2 -  44834318 ct
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                         920 2 +      3372 ct
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tupaia_chinensis.KB320831.1                             2787123 2 -   3938065 cA
i Tupaia_chinensis.KB320831.1                           C 0 I 126
s Tupaia_tana.TupTan_flattened_line_3657864                   113 2 +       342 ca
i Tupaia_tana.TupTan_flattened_line_3657864             C 0 I 108
s Varecia_rubra.k141_432109                                  1786 1 -     20643 c-
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             21331 1 -     33872 c-
i Varecia_variegata.k141_775891                         C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     12204 2 -     20485 CT
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
e Ziphius_cavirostris.ZipCav_flattened_line_127025           3747 0 -      8775 C
e Zalophus_californianus.ZalCal_flattened_line_4097        210577 0 -    227762 C
e Vulpes_lagopus.VulLag_flattened_line_2045                134027 0 -    281493 C
e Vicugna_pacos.KN269600.1                                1521557 0 -   2331223 C
e Ursus_maritimus.KK498671.1                              6510874 0 +  28682327 C
e Uropsilus_gracilis.UroGra_scaffold_4143_0                 23454 0 -     25548 C
e Tursiops_truncatus.MRVK01000923.1                      69310244 0 -  96451834 C
e Trichechus_manatus.JH594618.1                          16078228 0 +  31416278 C
e Tragulus_javanicus.TraJav_scaffold_14717                   2129 0 +     90398 C
e Tonatia_saurophila.TonSau_scaffold_3334                  132773 0 -    259118 C
e Tolypeutes_matacus.TolMat_scaffold_269431                   506 0 +      6782 C
e Tapirus_terrestris.TapTer_scaffold_14939                  54296 0 +     99546 C
e Tapirus_indicus.TapInd_scaffold_176                      803637 0 +   1148477 C
e Tamandua_tetradactyla.TamTet_scaffold_26877               11640 0 +     45698 C
e Tadarida_brasiliensis.TadBra_scaffold_145589               2698 0 -      6213 C
e Sus_scrofa.CM000824.4                                 189268784 0 + 218635234 C
e Spilogale_gracilis.SpiGra_flattened_line_905             230892 0 -    276980 C
e Solenodon_paradoxus.SolPar_flattened_line_1012            14492 0 +    739146 C
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   28266 0 -    114521 C
e Saiga_tatarica.SaiTat_scaffold_82192                       4364 1 +     12214 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                16177 0 +    109198 C
e Rhinolophus_sinicus.LVEH01000179.1                      1784476 0 +   2252614 C
e Rangifer_tarandus.RanTarSib_scaffold_24239                12718 1 +     68503 I
e Puma_concolor.QAVW01000427.1                          131530606 0 - 161321710 C
e Pteropus_vampyrus.KN525959.1                             600828 0 -   3946241 C
e Pteropus_alecto.KB031157.1                             13242874 0 -  17261082 C
e Pteronura_brasiliensis.PteBra_flattened_line_1343        241175 0 -    344369 C
e Pteronotus_parnellii.KE867983.1                             770 0 -     27784 C
e Procavia_capensis.ProCapCap_scaffold_15315                72836 0 +     78963 C
e Platanista_gangetica.PlaMin_flattened_line_72990           2210 0 +     21690 C
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            93202 0 +    112873 C
e Phocoena_phocoena.PhoPho_flattened_line_11948            118143 0 -    122454 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    111740 0 -    135482 C
e Pantholops_hodgsonii.KE114631.1                         1062792 1 -   1292953 I
e Panthera_tigris.KE721879.1                              5023790 0 -   6340057 C
e Panthera_pardus.KV860323.1                              3634013 0 +  18214204 C
e Panthera_onca.PanOnc_flattened_line_1615                  30409 0 +    295523 C
e Ovis_canadensis.OviCan_scaffold_6251                      75291 1 +    140051 I
e Ovis_aries.CM001582.2                                 134074077 1 - 275406953 I
e Otocyon_megalotis.JAEUCK010005121.1                      303962 0 -    505867 C
e Orycteropus_afer.OryAfe_flattened_line_13509              39760 0 -     66828 C
e Orcinus_orca.KB316965.1                                 7221526 0 -   7562323 C
e Okapia_johnstoni.LVCL01S0017931.1                         33794 1 +     78940 I
e Odocoileus_virginianus.KZ101650.1                       1076632 1 +   1425656 I
e Odobenus_rosmarus.KB229369.1                             675850 0 -   3126709 C
e Nyctereutes_procyonoides.CAJHUB010000786.1                26627 0 +   3668941 C
e Noctilio_leporinus.NocLep_scaffold_12062                  46213 0 +     94413 C
e Neophocaena_asiaeorientalis.KZ688543.1                  3947842 0 -   4490290 C
e Neomonachus_schauinslandi.NINY01007774.1                4481166 0 -  14209539 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             1962 0 -      8794 C
e Myotis_myotis.MyoMyo_scaffold_6123                         7208 0 +     66751 C
e Myotis_lucifugus.GL429887.1                             3462011 0 -   3747815 C
e Myotis_davidii.KB114863.1                               5016102 0 +   6462685 C
e Myotis_brandtii.KE161952.1                               964425 0 +   8389877 C
e Mustela_putorius.JH417978.1                             4419318 0 -  28371801 C
e Murina_feae.MurFea_scaffold_2254                          16097 0 -    100666 C
e Mungos_mungo.MunMun_flattened_line_8729                  140916 0 -    168139 C
e Moschus_moschiferus.MosMos_scaffold_146101                 1506 1 -      4346 I
e Mormoops_blainvillei.MorMeg_scaffold_2952                157880 0 +    265003 C
e Monodon_monoceros.MonMon_M_scaffold_5598                 143233 0 +    154973 C
e Mirounga_angustirostris.MirAng_flattened_line_8852         7565 0 -    104932 C
e Miniopterus_schreibersii.MinSch_scaffold_24116            30976 0 +     45743 C
e Miniopterus_natalensis.LDJU01000022.1                   8206299 0 +  10048721 C
e Micronycteris_hirsuta.MicHir_scaffold_37978               19560 0 -     32043 C
e Microgale_talazaci.MicTal_scaffold_34660                  27692 0 -     48017 C
e Mesoplodon_bidens.MesBid_scaffold_183284                    506 0 +      2166 C
e Mellivora_capensis.MelCap_flattened_line_1828            224465 0 -    226874 C
e Megaderma_lyra.MegLyr_scaffold_3562                       61372 0 -    234502 C
e Manis_pentadactyla.KN017078.1                             32945 0 +     58827 C
e Manis_javanica.JSZB01003966.1                            142880 0 +    252755 C
e Lycaon_pictus.CM007556.1                               11083631 0 +  39895028 C
e Loxodonta_africana.GL010040.1                          20587547 0 -  62548349 C
e Lipotes_vexillifer.KE558548.1                            132814 0 +   3060487 C
e Leptonychotes_weddellii.KB714749.1                      3082267 0 -   3498232 C
e Lasiurus_borealis.LasBor_scaffold_5102                   110586 0 -    115756 C
e Kogia_breviceps.KogBre_flattened_line_35920               20467 0 +     37189 C
e Inia_geoffrensis.IniGeo_flattened_line_66725               5635 0 +     17520 C
e Hyaena_hyaena.HyaHya_flattened_line_20729                 12565 0 -     67322 C
e Hipposideros_galeritus.HipGal_scaffold_104691              4549 0 -      9143 C
e Hipposideros_armiger.JXIK01001085.1                      275394 0 -    477199 C
e Hippopotamus_amphibius.HipAmp_scaffold_1308              143977 0 +    277961 C
e Heterohyrax_brucei.HetBruBak_scaffold_25354               52972 0 +     73687 C
e Hemitragus_hylocrius.HemHyl_scaffold_16669                24276 1 -     91191 I
e Helogale_parvula.HelPar_flattened_line_22962              13221 0 +     53719 C
e Giraffa_tippelskirchi.LVKQ01S012154.1                    177922 1 -    189561 I
e Felis_nigripes.FelNig_flattened_line_8080                 17455 0 +     52776 C
e Felis_catus_fca126.CM031420.1                         129276320 0 - 158578461 C
e Eubalaena_japonica.EubJap_flattened_line_7756             58282 0 +     89355 C
e Eschrichtius_robustus.EscRob_flattened_line_685          311853 0 +    330699 C
e Equus_przewalskii.ATBW01073585.1                           8103 0 +     92910 C
e Equus_caballus.CM000402.2                              13346111 0 +  41866177 C
e Equus_asinus.JREZ01000137.1                             2952100 0 -   4388051 C
e Enhydra_lutris.KZ291749.1                              85866908 0 +  99434291 C
e Elephantulus_edwardii.JH947210.1                        7803133 0 +  15467074 C
e Elaphurus_davidianus.JRFZ01086400.1                     1488409 1 +   1727528 I
e Eidolon_helvum.KE772537.1                                  9081 0 +     24177 C
e Echinops_telfairi.JH980316.1                           22990743 0 -  44670279 C
e Diceros_bicornis.DicBicMic_scaffold_24487                 60995 0 +     62380 C
e Dicerorhinus_sumatrensis.PEKH010003161.1                 318840 0 +    993696 C
e Desmodus_rotundus.KZ672188.1                           18695711 0 -  18957592 C
e Delphinapterus_leucas.KZ290064.1                       80033708 0 -  96802777 C
e Dasypus_novemcinctus.JH568778.1                          178581 0 -   6883506 C
e Cryptoprocta_ferox.CryFer_flattened_line_19014            48296 0 -     70449 C
e Crocidura_indochinensis.CroInd_scaffold_38409             15615 0 -     19186 C
e Craseonycteris_thonglongyai.CraTho_scaffold_22679         35790 0 -     40477 C
e Condylura_cristata.JH655880.1                          60609685 0 +  78930452 C
e Choloepus_hoffmanni.KN194586.1                           758709 0 +    964067 C
e Choloepus_didactylus.ChoDid_scaffold_36182                13403 0 -     21363 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_305802         1174 0 +      1857 C
e Catagonus_wagneri.CatWag_scaffold_1305                   155720 0 -    276539 C
e Carollia_perspicillata.CarPer_scaffold_4436               56403 0 +     67245 C
e Capra_hircus.CM004562.1                               135703097 1 - 157403528 I
e Capra_aegagrus.CM003214.1                              21321870 1 + 157394656 I
e Canis_lupus_orion.HG994411.1                           16451209 0 -  44759192 C
e Canis_lupus_familiaris.chr31                           11084175 0 +  39895921 C
e Canis_lupus_dingo.QKWQ01001993.1                       11261646 0 -  35597290 C
e Canis_lupus_VD.CanFam_VD_scaffold_16982                   10004 0 +     87036 C
e CanFam4.chr31                                          11514987 0 +  39901454 C
e Camelus_ferus.KB016973.1                                2969925 0 +   6889770 C
e Camelus_dromedarius.KN271192.1                           394191 0 -  15254737 C
e Camelus_bactrianus.KN276303.1                           3216004 0 -   8989139 C
e Bubalus_bubalis.KI419065.1                              1227870 1 -   1914593 I
e Bos_taurus.CM000177.6                                 136292249 1 - 158972876 I
e Bos_mutus.JH883513.1                                     568894 1 -    998990 I
e Bos_indicus.CM003021.1                                138136516 1 - 161108492 I
e Bison_bison.KN264915.1                                  6556285 1 +   6870073 I
e Beatragus_hunteri.BeaHun_scaffold_21644                   39863 1 -     72089 I
e Balaenoptera_bonaerensis.DF502048.1                        2200 0 -     13118 C
e Balaenoptera_acutorostrata.KI537095.1                  26376969 0 +  51448160 C
e Artibeus_jamaicensis.ArtJam_scaffold_41619                 5322 0 -     29036 C
e Antilocapra_americana.AntAmePen_scaffold_42841            27669 1 +     33004 I
e Anoura_caudifer.AnoCau_scaffold_422                      387226 0 -    631301 C
e Ammotragus_lervia.NIVO01013474.1                        3516763 1 +   4113121 I
e Ailurus_fulgens.LNAC01000003.1                          7090101 0 -  16596857 C
e Ailuropoda_melanoleuca.LNAT01000321.1                  10653599 0 +  23371972 C
e Acinonyx_jubatus.LLWD01000356.1                         2030266 0 +   3721120 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16291 1 -    119109 I
e Hylobates_pileatus_b.LG03                                     92553610 0 - 189753342 C
e Microtus_ochrogaster.CM001673.1                        22815303 0 -  98408828 C
e Xerus_inauris.XerIna_scaffold_7898                       123347 2 -    134049 I
e Spermophilus_dauricus.KZ294190.1                        2236154 1 +   2842873 I
e Sigmodon_hispidus.SigHis_scaffold_11332                   94308 0 -    120886 C
e Peromyscus_maniculatus.KI615518.1                       4946225 0 -   8017169 C
e Otolemur_garnettii.GL873528.1                          18004869 68 -  38779656 I
e Otolemur_crassicaudatus.k141_321880                       35431 68 +     38679 I
e Onychomys_torridus.OnyTor_scaffold_12578                  33056 0 +     62360 C
e Ondatra_zibethicus.OndZib_scaffold_6821                  121121 5 +    145789 I
e Mesocricetus_auratus.KB708139.1                         1042938 0 -  26018355 C
e Marmota_marmota.CZRN01000005.1                         36870074 2 +  64221397 I
e Ictidomys_tridecemlineatus.JH393315.1                   7122228 1 +  13083262 I
e Galagoides_demidoff.k141_1769638                           6763 68 +     27357 I
e Galago_senegalensis.k141_964197                            9743 68 -     43889 I
e Galago_moholi.ctg555                                     207363 68 -    847004 I
e Ellobius_talpinus.LOJH01090055.1                           2652 0 -      7838 C
e Ellobius_lutescens.LOEQ01003611.1                        235642 0 -    369425 C
e Dolichotis_patagonum.DolPat_scaffold_14102                33375 0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             56104 16 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                14631 16 +     26546 I
e Cricetulus_griseus.LT883672.1                          53025429 0 +  72327488 C
e Cavia_tschudii.CavTsc_scaffold_488                       173989 0 +    436027 C
e Cavia_porcellus.DS562889.1                             15795798 0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15783848 16 -  24422027 I
e Castor_canadensis.CasCan_scaffold_47037                   27015 0 +     33760 C
e Nomascus_siki_b.tarseq_80                             20456 0 -  18771707 C
e Nomascus_annamensis.k141_745421                             374 0 -      4569 C
e Nomascus_gabriellae.k141_1350167                            785 0 +      9928 C

a score=0.000000
s hg38.chr4_GL000008v2_random                                8163  3 +    209709 tt------------t
s Acinonyx_jubatus.LLWD01000356.1                         2030266  2 +   3721120 -t------------t
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    108546  3 -    189883 AT------------T
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10653599  2 +  23371972 -T------------T
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7090101  2 -  16596857 -T------------T
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                    8834  3 -     22067 AT------------T
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_3103707                  59185  3 +     61638 tt------------t
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        50993  3 +     53391 tt------------t
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         1717  3 +     72529 tt------------t
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          1293  3 +      3797 tt------------t
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             6387  3 -     18050 tt------------t
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  7504  3 -     11521 tt------------t
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              7062  3 -     21359 tt------------t
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1856473                                5445  3 +      7227 tt------------t
i Alouatta_juara.k141_1856473                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          6360  3 -     10438 tt------------t
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            3014  3 +      7047 tt------------t
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             6298  3 +     10410 tt------------t
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_390786                             7575  3 -      7615 tt------------t
i Alouatta_puruensis.k141_390786                        C 0 C 0
s Alouatta_seniculus.k141_990213                             3019  3 +      6429 tt------------t
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3516764  2 +   4113121 -T------------T
i Ammotragus_lervia.NIVO01013474.1                      I 1 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      387226  2 -    631301 -T------------T
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            27670  2 +     33004 -T------------T
i Antilocapra_americana.AntAmePen_scaffold_42841        I 1 C 0
s Aotus_azarae.k141_3170768                                 58693  3 +     78111 tt------------t
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            1624  3 +     22701 tt------------t
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5745584  3 +   9889416 tt------------t
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             2176  3 -    104377 tt------------t
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               2176  3 +     23246 tt------------t
i Aotus_vociferans.k141_718647                          C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      14476  3 +     17483 tt------------t
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 5322  2 -     29036 -T------------T
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9535437  3 +  39197703 tt------------t
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             56725  3 +     85812 tt------------t
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 7722  3 +     89302 tt------------t
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             12231  3 -     58268 tt------------t
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             60219  3 +    119057 tt------------t
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               2170  3 -     25888 tt------------t
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 3031  1 -     16375 --------------t
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_767228                               9003  1 -      9688 --------------t
i Avahi_peyrierasi.k141_767228                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26376969  2 +  51448160 -T------------T
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        2200  2 -     13118 -T------------T
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   39864  2 -     72089 -T------------T
i Beatragus_hunteri.BeaHun_scaffold_21644               I 1 C 0
s Bison_bison.KN264915.1                                  6556286  2 +   6870073 -T------------T
i Bison_bison.KN264915.1                                I 1 C 0
s Bos_indicus.CM003021.1                                138136517  2 - 161108492 -T------------T
i Bos_indicus.CM003021.1                                I 1 C 0
s Bos_mutus.JH883513.1                                     568895  2 -    998990 -T------------T
i Bos_mutus.JH883513.1                                  I 1 C 0
s Bos_taurus.CM000177.6                                 136292250  2 - 158972876 -T------------T
i Bos_taurus.CM000177.6                                 I 1 C 0
s Bubalus_bubalis.KI419065.1                              1227871  2 -   1914593 -T------------T
i Bubalus_bubalis.KI419065.1                            I 1 C 0
s Cacajao_ayresi.k141_724503                               110094  3 -    171031 tt------------t
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                  9120  3 +    125063 tt------------t
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                11168  3 -    216513 tt------------t
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        3707  3 -    134917 tt------------t
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3216004  2 -   8989139 -T------------T
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           394191  2 -  15254737 -T------------T
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2969925  2 +   6889770 -T------------T
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11514987  2 +  39901454 -T------------T
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   10004  2 +     87036 -T------------T
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11261646  2 -  35597290 -T------------T
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11084175  2 +  39895921 -T------------T
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16451209  2 -  44759192 -T------------T
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21321871  2 + 157394656 -T------------T
i Capra_aegagrus.CM003214.1                             I 1 C 0
s Capra_hircus.CM004562.1                               135703098  2 - 157403528 -T------------T
i Capra_hircus.CM004562.1                               I 1 C 0
s Capromys_pilorides.CapPil_scaffold_647363                   725  3 +      1887 AT------------T
i Capromys_pilorides.CapPil_scaffold_647363             C 0 I 1
s Carlito_syrichta.NW_007248099.1                          305477  3 +    345090 TT------------T
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               56403  2 +     67245 -T------------T
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   155720  2 -    276539 -T------------T
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18886905  3 -  29618158 tt------------t
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 4451  3 -     26817 tt------------t
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                 8691  3 +     25043 tt------------t
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         4513  3 +     21754 tt------------t
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4359532  2 +   7569818 -t------------t
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_305802         1174  2 +      1857 -T------------T
i Ceratotherium_simum_cottoni.CerCot_scaffold_305802    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6550981  3 +   6739814 tt------------t
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      52458  3 -     54931 tt------------t
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         17442  3 -     19697 tt------------t
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         54973  3 -    107033 tt------------t
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        1416  3 -      3853 tt------------t
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          25348  3 +     30494 tt------------t
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           1371  3 -      4022 tt------------t
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          1261  3 -      3505 tt------------t
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           20072  3 +     35983 tt------------t
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11985848  3 +  12117833 tt------------t
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46473344  3 +  46592721 tt------------t
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      31171  3 +     33420 tt------------t
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        1207  3 -      3443 tt------------t
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      2198  3 -      4669 tt------------t
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        2002  3 -      4411 tt------------t
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         1522  3 -      4205 tt------------t
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           55367  1 -     68416 --------------t
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            4417  1 +     13308 --------------t
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             1704  3 -     18223 tt------------t
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             18727  3 +     25473 tt------------t
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           37766  3 +     57117 tt------------t
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          42441  3 +     54541 tt------------t
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15957876  2 +  43084221 -T------------T
i Chinchilla_lanigera.JH721867.1                        C 0 I 1
s Chiropotes_israelita.k141_1189915                         67315  3 +    196370 tt------------t
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          11489  3 +     40510 tt------------t
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15134802  3 -  15256731 tt------------t
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      29848  3 -     53260 tt------------t
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101140296  3 + 101219884 tt------------t
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                13403  2 -     21363 -T------------T
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           758709  2 +    964067 -t------------t
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10878878  3 +  10971483 tt------------t
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147660037  3 + 156195979 tt------------t
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            12022  3 +     23629 tt------------t
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60609685  2 +  78930452 -T------------T
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         35790  2 -     40477 -T------------T
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 273984  3 -    399297 TT------------T
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             15615  2 -     19186 -T------------T
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            48296  2 -     70449 -T------------T
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 26886  3 -     67205 TT------------T
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 I 1
s Dasypus_novemcinctus.JH568778.1                          178581  2 -   6883506 -T------------T
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16841241  1 +  31942871 --------------t
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80033708  2 -  96802777 -T------------T
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18695711  2 -  18957592 -t------------t
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 318840  2 +    993696 -T------------T
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_24487                 60995  2 +     62380 -T------------T
i Diceros_bicornis.DicBicMic_scaffold_24487             C 0 C 0
s Echinops_telfairi.JH980316.1                           22990743  2 -  44670279 -T------------T
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                  9081  2 +     24177 -T------------T
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1488410  2 +   1727528 -T------------T
i Elaphurus_davidianus.JRFZ01086400.1                   I 1 C 0
s Elephantulus_edwardii.JH947210.1                        7803133  2 +  15467074 -T------------T
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85866908  2 +  99434291 -T------------T
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Equus_asinus.JREZ01000137.1                             2952100  2 -   4388051 -T------------T
i Equus_asinus.JREZ01000137.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13346111  2 +  41866177 -T------------T
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                           8103  2 +     92910 -T------------T
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erythrocebus_patas.Contig8                             48766981  3 -  48907691 tt------------t
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          311853  2 +    330699 -T------------T
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             58282  2 +     89355 -T------------T
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              1440  1 +     13586 --------------t
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               1377  1 -      6809 --------------t
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             7847  1 +     36558 --------------t
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             4164  1 +     60246 --------------t
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 7652  1 +    109717 --------------t
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               12026  1 +     16540 --------------t
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                12303  1 +     27497 --------------t
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           14759  1 +     26808 --------------t
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                29493  1 +     46535 --------------t
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              12216  1 -     29447 --------------t
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129889246  2 - 159252932 -t------------t
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129276320  2 - 158578461 -t------------t
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 17455  2 +     52776 -T------------T
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13889450  3 -  19261668 tt------------t
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               152682  3 +    324696 TC------------T
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    177923  2 -    189561 -T------------T
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 1 C 0
s Glis_glis.GliGli_scaffold_79770                            9124  3 -     18683 tt------------t
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               1555  3 -     14630 tt------------t
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119648653  3 - 195582420 tt------------t
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   73681  3 +    118900 TG------------T
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                         1985  1 +      3980 --------------c
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             24465  1 +     26611 --------------c
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             1919  1 +     56096 --------------c
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        25192  1 -     42470 --------------c
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        41789  1 -     54384 --------------c
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              13221  2 +     53719 -T------------T
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                24277  2 -     91191 -T------------T
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 1 C 0
s Heterocephalus_glaber.JH602058.1                        2547558  4 +  31725842 tt-----------tt
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               52972  2 +     73687 -T------------G
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              143977  2 +    277961 -T------------T
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      275394  2 -    477199 -T------------T
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              4549  2 -      9143 -T------------T
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg649                                    98227  3 +    115816 tt------------c
i Hoolock_leuconedys.ctg649                                C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 12565  2 -     67322 -T------------T
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hylobates_abbotti.k141_493872                              1364  3 +      5897 tt------------c
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_282275                                577  3 +      1846 tt------------c
i Hylobates_agilis.k141_282275                          C 0 C 0
s Hylobates_klossii.k141_466549                              7822  3 +     11537 tt------------c
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_muelleri.k141_1133650                             799  3 -      2775 tt------------c
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     2543  3 +     22540 TT------------T
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7122229  3 +  13083262 tt------------t
i Ictidomys_tridecemlineatus.JH393315.1                 I 1 C 0
s Indri_indri.k141_3334527                                   8429  1 +      9207 --------------t
i Indri_indri.k141_3334527                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               5635  2 +     17520 -T------------T
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8561796  3 +  11848649 AT------------T
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               20467  2 +     37189 -T------------T
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          46280  3 -    147782 tt------------t
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   110586  2 -    115756 -T------------G
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258403468  1 - 285822530 --------------c
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        20362  1 +     39228 --------------t
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            49738  1 +     63517 --------------t
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        74958  1 +    116806 --------------t
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     27998  1 -     33031 --------------t
i Lepilemur_septentrionalis.k141_578524                 C 0 I 1
s Leptonychotes_weddellii.KB714749.1                      3082267  2 -   3498232 -T------------C
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lipotes_vexillifer.KE558548.1                            132814  2 +   3060487 -T------------T
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19244067  3 +  19376315 tt------------t
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            6970 13 +     84689 tttttTTTTTTT--T
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3774729 12 +   6799190 ttttCTTTTTT---T
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20587547  2 -  62548349 -T------------G
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11083631  2 +  39895028 -T------------T
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             15753  3 +     74745 tt------------t
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12702259  3 +  12821369 tt------------t
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               4352  3 +      6569 tt------------t
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           42652  3 +     63263 tt------------t
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_1068107                               11229  3 +     12679 tt------------t
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                 802  3 +      3017 tt------------t
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  42414  3 -     79256 tt------------t
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196031334  3 + 196197964 tt------------t
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11441438  3 +  11645122 tt------------t
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   1364  3 -     46448 tt------------t
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                1191  3 -      3617 tt------------t
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 11524  3 -     55006 tt------------t
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43836563  3 +  43892939 tt------------t
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                3786  3 -      5978 tt------------t
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               1366  3 -     27140 tt------------t
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43433227  3 -  43563597 tt------------t
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4446053  3 -   4543643 tt------------t
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            142880  2 +    252755 -T------------T
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             32945  2 +     58827 -T------------T
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36870076  3 +  64221397 tt------------t
i Marmota_marmota.CZRN01000005.1                        I 2 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       61372  2 -    234502 -T------------C
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_1828            224465  2 -    226874 -A------------A
i Mellivora_capensis.MelCap_flattened_line_1828         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233                8006  3 +     15977 TT------------T
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_183284                    506  2 +      2166 -T------------T
i Mesoplodon_bidens.MesBid_scaffold_183284              C 0 C 0
s Microcebus_murinus.CM007691.1                          16506583  1 +  47401472 --------------t
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  27692  2 -     48017 -T------------T
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               19560  2 -     32043 -T------------T
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8206299  2 +  10048721 -G------------T
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            30976  2 +     45743 -G------------T
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        31901  3 +     34273 tt------------t
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         7565  2 -    104932 -T------------C
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     1997  1 +      8497 --------------t
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 143233  2 +    154973 -T------------T
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                157880  2 +    265003 -T------------T
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 1507  2 -      4346 -T------------T
i Moschus_moschiferus.MosMos_scaffold_146101            I 1 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  140916  2 -    168139 -T------------T
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          16097  2 -    100666 -T------------T
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70761471  3 +  92629107 TT------------A
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75484546  3 +  98207768 TT------------A
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67549085  3 +  89017189 TT------------A
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74324184  3 +  97876770 TT------------A
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              7002  3 +     98495 tt------------t
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4419318  2 -  28371801 -T------------T
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     86467  3 -    117718 AT------------T
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 I 1
s Myotis_brandtii.KE161952.1                               964425  2 +   8389877 -T------------T
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5016102  2 +   6462685 -T------------T
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3462011  2 -   3747815 -T------------T
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         7208  2 +     66751 -T------------T
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             1962  2 -      8794 -T------------T
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            107266  3 +    362372 tt------------c
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               4266  3 +     48152 tt------------t
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4481166  2 -  14209539 -T------------C
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3947842  2 -   4490290 -T------------T
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  46213  2 +     94413 -T------------T
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                26627  2 +   3668941 -T------------T
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65563325  1 -  95554990 --------------T
i Nycticebus_bengalensis.LG16                           I 8 C 0
s Nycticebus_coucang.k141_2051882                             156 15 +      6470 TTTTTTTTTTTTTTT
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65665681 15 +  89412551 tttttTTTTTTTTTT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Octodon_degus.JH651621.1                                3675017  3 +  10294119 tt------------t
i Octodon_degus.JH651621.1                              C 0 I 1
s Odobenus_rosmarus.KB229369.1                             675850  2 -   3126709 -T------------C
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1076633  2 +   1425656 -T------------T
i Odocoileus_virginianus.KZ101650.1                     I 1 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         33795  2 +     78940 -T------------T
i Okapia_johnstoni.LVCL01S0017931.1                     I 1 C 0
s Orcinus_orca.KB316965.1                                 7221526  2 -   7562323 -T------------T
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              39760  2 -     66828 -T------------T
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      303962  2 -    505867 -T------------T
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Ovis_aries.CM001582.2                                 134074078  2 - 275406953 -T------------T
i Ovis_aries.CM001582.2                                 I 1 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      75292  2 +    140051 -T------------T
i Ovis_canadensis.OviCan_scaffold_6251                  I 1 C 0
s Pan_paniscus.AJFE02000950.1                                  33  3 -      1008 tt------------t
i Pan_paniscus.AJFE02000950.1                           n 3 I 94
s Pan_troglodytes.KZ622853.1                               258611  3 +    258671 tt------------t
i Pan_troglodytes.KZ622853.1                            I 2 n 3
s Panthera_onca.PanOnc_flattened_line_1615                  30409  2 +    295523 -T------------T
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3634013  2 +  18214204 -t------------t
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5023790  2 -   6340057 -t------------t
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1062793  2 -   1292953 -T------------T
i Pantholops_hodgsonii.KE114631.1                       I 1 C 0
s Papio_anubis.CM001492.2                               188152012  3 - 188283584 tt------------t
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            48224  3 +     76494 tt------------t
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47509408  3 +  47705337 tt------------t
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 63391  3 -    104429 tt------------t
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  13175  3 -     29451 tt------------t
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                33580  3 +     35859 tt------------t
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    111740  2 -    135482 -T------------T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           1321  3 -     23713 tt------------t
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            20618  3 -     27972 tt------------t
i Perodicticus_potto.k141_713187                        C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            118143  2 -    122454 -T------------T
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           1267  3 -      3310 tt------------t
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       21173  3 -     82327 tt------------t
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           17924  3 +     19957 tt------------t
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26735933  3 +  26888534 tt------------t
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            93202  2 +    112873 -T------------G
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             39807  3 -     61926 tt------------t
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        21236  3 +     78826 tt------------t
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              5187  3 -     15800 tt------------t
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                         8385  3 -     16101 tt------------t
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          1694  3 +      9673 tt------------t
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13470688  3 -  19735023 tt------------t
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                            9596  3 -     31692 tt------------t
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           2210  2 +     21690 -T------------T
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       18960  3 +     44506 tt------------t
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        19178  3 +     67491 tt------------t
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                       9423  3 -     98129 tt------------t
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     19023  3 +    147771 tt------------t
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        19274  3 -     23762 tt------------t
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_2078842                         19222  3 -     19696 tt------------t
i Plecturocebus_dubius.k141_2078842                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         19096  3 +    152463 tt------------t
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      5853  3 +      8943 tt------------t
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                          8813  3 +    134592 tt------------t
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          19406  3 -     75465 tt------------t
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              183450  3 -    373494 tt------------t
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19803354  3 +  19899266 tt------------t
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               1503  3 -     15069 tt------------t
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              1637  3 +     14865 tt------------t
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                72836  2 +     78963 -T------------G
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6844841  1 +  12164890 --------------C
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     13276  1 -     30946 --------------t
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_diadema.k141_577245                           39311  1 +     52369 --------------t
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         31700  1 -     44753 --------------t
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            13622  1 +     27322 --------------t
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       13266  1 -     53241 --------------t
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         35537  1 -     48185 --------------t
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           29067  3 +     77221 tt------------t
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                             770  2 -     27784 -t------------t
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        241175  2 -    344369 -T------------T
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13242874  2 -  17261082 -T------------T
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             600828  2 -   3946241 -T------------T
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131530606  2 - 161321710 -t------------t
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             25628  3 +     56732 tt------------t
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6802118  3 +   6970761 tt------------t
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             1510  3 +     18040 tt------------t
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                12719  2 +     68503 -T------------T
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 1 C 0
s Rattus_norvegicus.chr11                                13911011  3 +  90463843 TT------------A
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1784476  2 +   2252614 -t------------t
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           12065  3 -     14454 tt------------t
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206373391  3 - 206558726 tt------------t
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44851039  3 -  45163003 tt------------t
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                16177  2 +    109198 -T------------T
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       4365  2 +     12214 -T------------T
i Saiga_tatarica.SaiTat_scaffold_82192                  I 1 C 0
s Saimiri_boliviensis.NW_024100938.1                     15668831  3 -  43202129 tt------------t
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                         706  3 +     34089 tt------------t
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                               637  3 -     60842 tt------------t
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                               706  3 +     67014 tt------------t
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                               706  3 +     60816 tt------------t
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                  634  3 -     76454 tt------------t
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17337214  3 -  30362882 tt------------t
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         16815  3 -     62485 tt------------t
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   28266  2 -    114521 -T------------T
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1527475                       24053  3 +     26421 tt------------t
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       4515  3 +     20762 tt------------t
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         38248  3 +     40653 tt------------t
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                            8807  3 -     12194 tt------------t
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     22226  3 -     27512 tt------------t
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         31247  3 -     33692 tt------------t
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            14492  2 +    739146 -T------------T
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2236155  3 +   2842873 tt------------t
i Spermophilus_dauricus.KZ294190.1                      I 1 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             230892  2 -    276980 -T------------T
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Sus_scrofa.CM000824.4                                 189268784  1 + 218635234 -T-------------
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                     13898177  3 +  13920577 tt------------C
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               2698  2 -      6213 -T------------T
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               11640  2 +     45698 -T------------T
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      803637  2 +   1148477 -T------------T
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  54296  2 +     99546 -T------------T
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               22966  3 +     42269 tt------------t
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               56274  3 +     65473 tt------------t
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194003547  3 - 194193292 tt------------t
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                   506  2 +      6782 -T------------C
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  132773  2 -    259118 -T------------T
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        22625  3 +     38948 tt------------t
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   16352  3 -     32910 tt------------t
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       22250  3 +     24652 tt------------t
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      1135  3 -      3559 tt------------t
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           39074  3 -     54611 tt------------t
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       15073  3 +     17312 tt------------t
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    22443  3 -     25040 tt------------t
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          1109  3 +      3528 tt------------t
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  47471  3 +     51589 tt------------t
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       10639  3 +     14732 tt------------t
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       1117  3 -     28054 tt------------t
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44655912  3 -  44834318 tt------------t
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                         922  3 +      3372 tt------------t
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   2129  2 +     90398 -T------------T
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16078228  2 +  31416278 -T------------G
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2787251  3 -   3938065 tt------------t
i Tupaia_chinensis.KB320831.1                           I 126 C 0
s Tupaia_tana.TupTan_flattened_line_3657864                   223  3 +       342 tt------------t
i Tupaia_tana.TupTan_flattened_line_3657864             I 108 C 0
s Tursiops_truncatus.MRVK01000923.1                      69310244  2 -  96451834 -T------------T
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 23454  2 -     25548 -T------------T
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6510874  2 +  28682327 -T------------T
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  1787  1 -     20643 --------------t
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             21332  1 -     33872 --------------t
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1521557  2 -   2331223 -T------------T
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                134027  2 -    281493 -T------------T
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       123349  3 -    134049 tt------------t
i Xerus_inauris.XerIna_scaffold_7898                    I 2 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        210577  2 -    227762 -T------------C
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     12206  3 -     20485 TT------------C
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           3747  2 -      8775 -T------------T
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16291  1 -    119109 I
e Hylobates_pileatus_b.LG03                                     92553610  0 - 189753342 C
e Microtus_ochrogaster.CM001673.1                        22815303  0 -  98408828 C
e Sigmodon_hispidus.SigHis_scaffold_11332                   94308  0 -    120886 C
e Peromyscus_maniculatus.KI615518.1                       4946225  0 -   8017169 C
e Otolemur_garnettii.GL873528.1                          18004869 68 -  38779656 I
e Otolemur_crassicaudatus.k141_321880                       35431 68 +     38679 I
e Onychomys_torridus.OnyTor_scaffold_12578                  33056  0 +     62360 C
e Ondatra_zibethicus.OndZib_scaffold_6821                  121121  5 +    145789 I
e Mesocricetus_auratus.KB708139.1                         1042938  0 -  26018355 C
e Galagoides_demidoff.k141_1769638                           6763 68 +     27357 I
e Galago_senegalensis.k141_964197                            9743 68 -     43889 I
e Galago_moholi.ctg555                                     207363 68 -    847004 I
e Ellobius_talpinus.LOJH01090055.1                           2652  0 -      7838 C
e Ellobius_lutescens.LOEQ01003611.1                        235642  0 -    369425 C
e Dolichotis_patagonum.DolPat_scaffold_14102                33375  0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             56104 16 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                14631 16 +     26546 I
e Ctenodactylus_gundi.CteGun_scaffold_447                  204706  0 -    956709 C
e Cricetulus_griseus.LT883672.1                          53025429  0 +  72327488 C
e Cavia_tschudii.CavTsc_scaffold_488                       173989  0 +    436027 C
e Cavia_porcellus.DS562889.1                             15795798  0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15783848 16 -  24422027 I
e Castor_canadensis.CasCan_scaffold_47037                   27015  0 +     33760 C
e Nomascus_siki_b.tarseq_80                             20456  0 -  18771707 C
e Nomascus_annamensis.k141_745421                             374  0 -      4569 C
e Nomascus_gabriellae.k141_1350167                            785  0 +      9928 C

a score=0.000000
s hg38.chr4_GL000008v2_random                                8166  3 +    209709 t------------gc
s Allenopithecus_nigroviridis.k141_3103707                  59188  3 +     61638 t------------GT
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        50996  3 +     53391 t------------GT
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         1720  3 +     72529 t------------GT
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          1296  3 +      3797 t------------GT
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             6390  3 -     18050 t------------GT
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  7507  3 -     11521 t------------GT
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              7065  3 -     21359 t------------GT
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1856473                                5448  3 +      7227 t------------GT
i Alouatta_juara.k141_1856473                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          6363  3 -     10438 t------------GT
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            3017  3 +      7047 t------------GT
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             6301  3 +     10410 t------------GT
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_390786                             7578  3 -      7615 t------------GT
i Alouatta_puruensis.k141_390786                        C 0 C 0
s Alouatta_seniculus.k141_990213                             3022  3 +      6429 t------------GT
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Aotus_azarae.k141_3170768                                 58696  3 +     78111 t------------GT
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            1627  3 +     22701 t------------GT
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5745587  3 +   9889416 t------------gt
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             2179  3 -    104377 t------------GT
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               2179  3 +     23246 t------------GT
i Aotus_vociferans.k141_718647                          C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      14479  3 +     17483 t------------tT
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9535440  3 +  39197703 t------------GT
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             56728  3 +     85812 t------------GT
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 7725  3 +     89302 t------------GT
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             12234  3 -     58268 t------------GT
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             60222  3 +    119057 t------------GT
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               2173  3 -     25888 t------------GT
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 3032  3 -     16375 t------------tt
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_767228                               9004  3 -      9688 t------------tt
i Avahi_peyrierasi.k141_767228                          C 0 C 0
s Cacajao_ayresi.k141_724503                               110097  3 -    171031 t------------GT
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                  9123  3 +    125063 t------------GT
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                11171  3 -    216513 t------------GT
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        3710  3 -    134917 t------------GT
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Carlito_syrichta.NW_007248099.1                          305480  3 +    345090 T------------GT
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Cebus_albifrons.Contig22                               18886908  3 -  29618158 t------------GT
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 4454  3 -     26817 t------------GT
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                 8694  3 +     25043 t------------GT
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         4516  3 +     21754 t------------GT
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6550984  3 +   6739814 t------------gt
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      52461  3 -     54931 t------------GT
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         17445  3 -     19697 t------------gt
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         54976  3 -    107033 t------------GT
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        1419  3 -      3853 t------------GT
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          25351  3 +     30494 t------------GT
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           1374  3 -      4022 t------------GT
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          1264  3 -      3505 t------------GT
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           20075  3 +     35983 t------------GT
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11985851  3 +  12117833 t------------GT
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46473347  3 +  46592721 t------------GT
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      31174  3 +     33420 t------------GT
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        1210  3 -      3443 t------------GT
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      2201  3 -      4669 t------------GT
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        2005  3 -      4411 t------------GT
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         1525  3 -      4205 t------------GT
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           55368  3 -     68416 t------------tt
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            4418  3 +     13308 t------------tt
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             1707  3 -     18223 t------------GT
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             18730  3 +     25473 t------------GT
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           37769  3 +     57117 t------------GT
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          42444  3 +     54541 t------------GT
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chiropotes_israelita.k141_1189915                         67318  3 +    196370 t------------GT
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          11492  3 +     40510 t------------GT
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15134805  3 -  15256731 t------------GT
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      29851  3 -     53260 t------------GT
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101140299  3 + 101219884 t------------gt
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10878881  3 +  10971483 t------------gt
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147660040  3 + 156195979 t------------GT
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            12025  3 +     23629 t------------GT
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16841242  3 +  31942871 t------------AT
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Erythrocebus_patas.Contig8                             48766984  3 -  48907691 t------------GT
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eulemur_albifrons.k141_715837                              1441  3 +     13586 t------------at
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               1378  3 -      6809 t------------at
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             7848  3 +     36558 t------------at
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             4165  3 +     60246 t------------at
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 7653  3 +    109717 t------------at
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               12027  3 +     16540 t------------at
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                12304  3 +     27497 t------------at
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           14760  3 +     26808 t------------at
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                29494  3 +     46535 t------------at
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              12217  3 -     29447 t------------at
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               152685 15 +    324696 CCCCCCCCTCCCCGT
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Gorilla_beringei.k141_111300                               1558  3 -     14630 t------------GT
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119648656  3 - 195582420 t------------gt
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                         1986  3 +      3980 t------------tt
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             24466  3 +     26611 t------------tt
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             1920  3 +     56096 t------------tt
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        25193  3 -     42470 t------------tt
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        41790  3 -     54384 t------------tt
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Hoolock_leuconedys.ctg649                                    98230  3 +    115816 t------------GT
i Hoolock_leuconedys.ctg649                                C 0 C 0
s Hylobates_abbotti.k141_493872                              1367  3 +      5897 t------------GT
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_282275                                580  3 +      1846 t------------GT
i Hylobates_agilis.k141_282275                          C 0 C 0
s Hylobates_klossii.k141_466549                              7825  3 +     11537 t------------GT
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_muelleri.k141_1133650                             802  3 -      2775 t------------GT
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Indri_indri.k141_3334527                                   8430  3 +      9207 t------------tt
i Indri_indri.k141_3334527                              C 0 C 0
s Lagothrix_lagothricha.k141_12968                          46283  3 -    147782 t------------GT
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lemur_catta.scaffold_1                                258403469  3 - 285822530 t------------tt
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        20363  3 +     39228 t------------tt
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            49739  3 +     63517 t------------tt
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        74959  3 +    116806 t------------tt
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     28000  3 -     33031 t------------tt
i Lepilemur_septentrionalis.k141_578524                 I 1 C 0
s Lophocebus_aterrimus.ctg55                             19244070  3 +  19376315 t------------GT
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            6983  3 +     84689 T------------TT
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3774741  3 +   6799190 T------------TT
i Loris_tardigradus.ctg97                               C 0 C 0
s Macaca_arctoides.k141_2201161                             15756  3 +     74745 t------------GT
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12702262  3 +  12821369 t------------GT
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               4355  3 +      6569 t------------GT
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           42655  3 +     63263 t------------GT
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_1068107                               11232  3 +     12679 t------------GT
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                 805  3 +      3017 t------------GT
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  42417  3 -     79256 t------------GT
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196031337  3 + 196197964 t------------gt
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11441441  3 +  11645122 t------------gt
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   1367  3 -     46448 t------------GT
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                1194  3 -      3617 t------------GT
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 11527  3 -     55006 t------------GT
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43836566  3 +  43892939 t------------GT
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                3789  3 -      5978 t------------GT
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               1369  3 -     27140 t------------GT
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43433230  3 -  43563597 t------------GT
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4446056  3 -   4543643 t------------GT
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Microcebus_murinus.CM007691.1                          16506584  3 +  47401472 t------------tt
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        31904  3 +     34273 t------------GT
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirza_zaza.k141_226143                                     1998  3 +      8497 t------------tt
i Mirza_zaza.k141_226143                                C 0 C 0
s Nasalis_larvatus.k141_153429                               4269  3 +     48152 t------------GT
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Nycticebus_bengalensis.LG16                            65563326  3 -  95554990 T------------TT
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                             171  3 +      6470 T------------TT
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65665696  3 +  89412551 T------------TT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Pan_paniscus.CM003386.1                               127570900  3 - 205426864 t------------gt
i Pan_paniscus.CM003386.1                               I 3 C 0
s Pan_troglodytes.CM009241.2                            120148047  3 - 196562556 t------------gt
i Pan_troglodytes.CM009241.2                            I 3 C 0
s Papio_anubis.CM001492.2                               188152015  3 - 188283584 t------------gt
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            48227  3 +     76494 t------------GT
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47509411  3 +  47705337 t------------GT
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 63394  3 -    104429 t------------GT
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  13178  3 -     29451 t------------GT
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                33583  3 +     35859 t------------GT
i Papio_ursinus.k141_3762866                            C 0 C 0
s Perodicticus_ibeanus.k141_117958                           1324  3 -     23713 t------------tT
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            20621  3 -     27972 t------------tT
i Perodicticus_potto.k141_713187                        C 0 C 0
s Piliocolobus_badius.k141_1497351                           1270  3 -      3310 t------------GT
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       21176  3 -     82327 t------------GT
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           17927  3 +     19957 t------------GT
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26735936  3 +  26888534 t------------gt
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pithecia_albicans.k141_991845                             39810  3 -     61926 t------------AT
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        21239  3 +     78826 t------------AT
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              5190  3 -     15800 t------------AT
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                         8388  3 -     16101 t------------AT
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          1697  3 +      9673 t------------AT
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13470691  3 -  19735023 t------------AT
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                            9599  3 -     31692 t------------AT
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       18963  3 +     44506 t------------GT
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        19181  3 +     67491 t------------GT
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                       9426  3 -     98129 t------------GT
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     19026  3 +    147771 t------------GT
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        19277  3 -     23762 t------------GT
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_2078842                         19225  3 -     19696 t------------GT
i Plecturocebus_dubius.k141_2078842                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         19099  3 +    152463 t------------GT
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      5856  3 +      8943 t------------GT
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                          8816  3 +    134592 t------------GT
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          19409  3 -     75465 t------------GT
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              183453  3 -    373494 t------------gt
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19803357  3 +  19899266 t------------GT
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               1506  3 -     15069 t------------GT
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              1640  3 +     14865 t------------GT
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6844842  3 +  12164890 T------------TT
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     13277  3 -     30946 t------------tt
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_diadema.k141_577245                           39312  3 +     52369 t------------tt
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         31701  3 -     44753 t------------tt
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            13623  3 +     27322 t------------tt
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       13267  3 -     53241 t------------at
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         35538  3 -     48185 t------------tt
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Pygathrix_cinerea.k141_374971                             25631  3 +     56732 t------------GT
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6802121  3 +   6970761 t------------GT
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             1513  3 +     18040 t------------GT
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rhinopithecus_bieti.k119_102124                           12068  3 -     14454 t------------GT
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206373394  3 - 206558726 t------------gt
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44851042  3 -  45163003 t------------GT
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15668834  3 -  43202129 t------------gt
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                         709  3 +     34089 t------------GT
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                               640  3 -     60842 t------------GT
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                               709  3 +     67014 t------------GT
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                               709  3 +     60816 t------------GT
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                  637  3 -     76454 t------------GT
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17337217  3 -  30362882 t------------GT
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         16818  3 -     62485 t------------GT
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Semnopithecus_entellus.k141_1527475                       24056  3 +     26421 t------------GT
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       4518  3 +     20762 t------------GT
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         38251  3 +     40653 t------------GT
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                            8810  3 -     12194 t------------GT
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     22229  3 -     27512 t------------GT
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         31250  3 -     33692 t------------GT
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Symphalangus_syndactylus.tarseq_24                     13898180  3 +  13920577 T------------GT
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tarsius_lariang.k141_609102                               22969  3 +     42269 G------------GT
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               56277  3 +     65473 G------------GT
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194003550  3 - 194193292 t------------gt
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Trachypithecus_auratus.k141_738098                        22628  3 +     38948 t------------GT
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   16355  3 -     32910 t------------GT
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       22253  3 +     24652 t------------GT
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      1138  3 -      3559 t------------GT
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           39077  3 -     54611 t------------GT
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       15076  3 +     17312 t------------GT
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    22446  3 -     25040 t------------GT
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          1112  3 +      3528 t------------GT
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  47474  3 +     51589 t------------GT
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       10642  3 +     14732 t------------GT
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       1120  3 -     28054 t------------GT
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44655915  3 -  44834318 t------------GT
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                         925  3 +      3372 t------------GT
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Varecia_rubra.k141_432109                                  1788  3 -     20643 t------------at
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             21333  3 -     33872 t------------at
i Varecia_variegata.k141_775891                         C 0 C 0
e Ziphius_cavirostris.ZipCav_flattened_line_127025           3749  0 -      8775 C
e Zalophus_californianus.ZalCal_flattened_line_4097        210579  0 -    227762 C
e Vulpes_lagopus.VulLag_flattened_line_2045                134029  0 -    281493 C
e Vicugna_pacos.KN269600.1                                1521559  0 -   2331223 C
e Ursus_maritimus.KK498671.1                              6510876  0 +  28682327 C
e Uropsilus_gracilis.UroGra_scaffold_4143_0                 23456  0 -     25548 C
e Tursiops_truncatus.MRVK01000923.1                      69310246  0 -  96451834 C
e Trichechus_manatus.JH594618.1                          16078230  0 +  31416278 C
e Tragulus_javanicus.TraJav_scaffold_14717                   2131  0 +     90398 C
e Tonatia_saurophila.TonSau_scaffold_3334                  132775  0 -    259118 C
e Tolypeutes_matacus.TolMat_scaffold_269431                   508  0 +      6782 C
e Tapirus_terrestris.TapTer_scaffold_14939                  54298  0 +     99546 C
e Tapirus_indicus.TapInd_scaffold_176                      803639  0 +   1148477 C
e Tamandua_tetradactyla.TamTet_scaffold_26877               11642  0 +     45698 C
e Tadarida_brasiliensis.TadBra_scaffold_145589               2700  0 -      6213 C
e Sus_scrofa.CM000824.4                                 189268785  0 + 218635234 C
e Spilogale_gracilis.SpiGra_flattened_line_905             230894  0 -    276980 C
e Solenodon_paradoxus.SolPar_flattened_line_1012            14494  0 +    739146 C
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   28268  0 -    114521 C
e Saiga_tatarica.SaiTat_scaffold_82192                       4367  0 +     12214 C
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                16179  0 +    109198 C
e Rhinolophus_sinicus.LVEH01000179.1                      1784478  0 +   2252614 C
e Rangifer_tarandus.RanTarSib_scaffold_24239                12721  0 +     68503 C
e Puma_concolor.QAVW01000427.1                          131530608  0 - 161321710 C
e Pteropus_vampyrus.KN525959.1                             600830  0 -   3946241 C
e Pteropus_alecto.KB031157.1                             13242876  0 -  17261082 C
e Pteronura_brasiliensis.PteBra_flattened_line_1343        241177  0 -    344369 C
e Pteronotus_parnellii.KE867983.1                             772  0 -     27784 C
e Procavia_capensis.ProCapCap_scaffold_15315                72838  0 +     78963 C
e Platanista_gangetica.PlaMin_flattened_line_72990           2212  0 +     21690 C
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            93204  0 +    112873 C
e Phocoena_phocoena.PhoPho_flattened_line_11948            118145  0 -    122454 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    111742  0 -    135482 C
e Pantholops_hodgsonii.KE114631.1                         1062795  0 -   1292953 C
e Panthera_tigris.KE721879.1                              5023792  0 -   6340057 C
e Panthera_pardus.KV860323.1                              3634015  0 +  18214204 C
e Panthera_onca.PanOnc_flattened_line_1615                  30411  0 +    295523 C
e Ovis_canadensis.OviCan_scaffold_6251                      75294  0 +    140051 C
e Ovis_aries.CM001582.2                                 134074080  0 - 275406953 C
e Otocyon_megalotis.JAEUCK010005121.1                      303964  0 -    505867 C
e Orycteropus_afer.OryAfe_flattened_line_13509              39762  0 -     66828 C
e Orcinus_orca.KB316965.1                                 7221528  0 -   7562323 C
e Okapia_johnstoni.LVCL01S0017931.1                         33797  0 +     78940 C
e Odocoileus_virginianus.KZ101650.1                       1076635  0 +   1425656 C
e Odobenus_rosmarus.KB229369.1                             675852  0 -   3126709 C
e Nyctereutes_procyonoides.CAJHUB010000786.1                26629  0 +   3668941 C
e Noctilio_leporinus.NocLep_scaffold_12062                  46215  0 +     94413 C
e Neophocaena_asiaeorientalis.KZ688543.1                  3947844  0 -   4490290 C
e Neomonachus_schauinslandi.NINY01007774.1                4481168  0 -  14209539 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             1964  0 -      8794 C
e Myotis_myotis.MyoMyo_scaffold_6123                         7210  0 +     66751 C
e Myotis_lucifugus.GL429887.1                             3462013  0 -   3747815 C
e Myotis_davidii.KB114863.1                               5016104  0 +   6462685 C
e Myotis_brandtii.KE161952.1                               964427  0 +   8389877 C
e Mustela_putorius.JH417978.1                             4419320  0 -  28371801 C
e Murina_feae.MurFea_scaffold_2254                          16099  0 -    100666 C
e Mungos_mungo.MunMun_flattened_line_8729                  140918  0 -    168139 C
e Moschus_moschiferus.MosMos_scaffold_146101                 1509  0 -      4346 C
e Mormoops_blainvillei.MorMeg_scaffold_2952                157882  0 +    265003 C
e Monodon_monoceros.MonMon_M_scaffold_5598                 143235  0 +    154973 C
e Mirounga_angustirostris.MirAng_flattened_line_8852         7567  0 -    104932 C
e Miniopterus_schreibersii.MinSch_scaffold_24116            30978  0 +     45743 C
e Miniopterus_natalensis.LDJU01000022.1                   8206301  0 +  10048721 C
e Micronycteris_hirsuta.MicHir_scaffold_37978               19562  0 -     32043 C
e Microgale_talazaci.MicTal_scaffold_34660                  27694  0 -     48017 C
e Mesoplodon_bidens.MesBid_scaffold_183284                    508  0 +      2166 C
e Mellivora_capensis.MelCap_flattened_line_1828            224467  0 -    226874 C
e Megaderma_lyra.MegLyr_scaffold_3562                       61374  0 -    234502 C
e Manis_pentadactyla.KN017078.1                             32947  0 +     58827 C
e Manis_javanica.JSZB01003966.1                            142882  0 +    252755 C
e Lycaon_pictus.CM007556.1                               11083633  0 +  39895028 C
e Loxodonta_africana.GL010040.1                          20587549  0 -  62548349 C
e Lipotes_vexillifer.KE558548.1                            132816  0 +   3060487 C
e Leptonychotes_weddellii.KB714749.1                      3082269  0 -   3498232 C
e Lasiurus_borealis.LasBor_scaffold_5102                   110588  0 -    115756 C
e Kogia_breviceps.KogBre_flattened_line_35920               20469  0 +     37189 C
e Inia_geoffrensis.IniGeo_flattened_line_66725               5637  0 +     17520 C
e Hyaena_hyaena.HyaHya_flattened_line_20729                 12567  0 -     67322 C
e Hipposideros_galeritus.HipGal_scaffold_104691              4551  0 -      9143 C
e Hipposideros_armiger.JXIK01001085.1                      275396  0 -    477199 C
e Hippopotamus_amphibius.HipAmp_scaffold_1308              143979  0 +    277961 C
e Heterohyrax_brucei.HetBruBak_scaffold_25354               52974  0 +     73687 C
e Hemitragus_hylocrius.HemHyl_scaffold_16669                24279  0 -     91191 C
e Helogale_parvula.HelPar_flattened_line_22962              13223  0 +     53719 C
e Giraffa_tippelskirchi.LVKQ01S012154.1                    177925  0 -    189561 C
e Felis_nigripes.FelNig_flattened_line_8080                 17457  0 +     52776 C
e Felis_catus_fca126.CM031420.1                         129276322  0 - 158578461 C
e Eubalaena_japonica.EubJap_flattened_line_7756             58284  0 +     89355 C
e Eschrichtius_robustus.EscRob_flattened_line_685          311855  0 +    330699 C
e Equus_przewalskii.ATBW01073585.1                           8105  0 +     92910 C
e Equus_caballus.CM000402.2                              13346113  0 +  41866177 C
e Equus_asinus.JREZ01000137.1                             2952102  0 -   4388051 C
e Enhydra_lutris.KZ291749.1                              85866910  0 +  99434291 C
e Elephantulus_edwardii.JH947210.1                        7803135  0 +  15467074 C
e Elaphurus_davidianus.JRFZ01086400.1                     1488412  0 +   1727528 C
e Eidolon_helvum.KE772537.1                                  9083  0 +     24177 C
e Echinops_telfairi.JH980316.1                           22990745  0 -  44670279 C
e Diceros_bicornis.DicBicMic_scaffold_24487                 60997  0 +     62380 C
e Dicerorhinus_sumatrensis.PEKH010003161.1                 318842  0 +    993696 C
e Desmodus_rotundus.KZ672188.1                           18695713  0 -  18957592 C
e Delphinapterus_leucas.KZ290064.1                       80033710  0 -  96802777 C
e Dasypus_novemcinctus.JH568778.1                          178583  0 -   6883506 C
e Cryptoprocta_ferox.CryFer_flattened_line_19014            48298  0 -     70449 C
e Crocidura_indochinensis.CroInd_scaffold_38409             15617  0 -     19186 C
e Craseonycteris_thonglongyai.CraTho_scaffold_22679         35792  0 -     40477 C
e Condylura_cristata.JH655880.1                          60609687  0 +  78930452 C
e Choloepus_hoffmanni.KN194586.1                           758711  0 +    964067 C
e Choloepus_didactylus.ChoDid_scaffold_36182                13405  0 -     21363 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_305802         1176  0 +      1857 C
e Catagonus_wagneri.CatWag_scaffold_1305                   155722  0 -    276539 C
e Carollia_perspicillata.CarPer_scaffold_4436               56405  0 +     67245 C
e Capra_hircus.CM004562.1                               135703100  0 - 157403528 C
e Capra_aegagrus.CM003214.1                              21321873  0 + 157394656 C
e Canis_lupus_orion.HG994411.1                           16451211  0 -  44759192 C
e Canis_lupus_familiaris.chr31                           11084177  0 +  39895921 C
e Canis_lupus_dingo.QKWQ01001993.1                       11261648  0 -  35597290 C
e Canis_lupus_VD.CanFam_VD_scaffold_16982                   10006  0 +     87036 C
e CanFam4.chr31                                          11514989  0 +  39901454 C
e Camelus_ferus.KB016973.1                                2969927  0 +   6889770 C
e Camelus_dromedarius.KN271192.1                           394193  0 -  15254737 C
e Camelus_bactrianus.KN276303.1                           3216006  0 -   8989139 C
e Bubalus_bubalis.KI419065.1                              1227873  0 -   1914593 C
e Bos_taurus.CM000177.6                                 136292252  0 - 158972876 C
e Bos_mutus.JH883513.1                                     568897  0 -    998990 C
e Bos_indicus.CM003021.1                                138136519  0 - 161108492 C
e Bison_bison.KN264915.1                                  6556288  0 +   6870073 C
e Beatragus_hunteri.BeaHun_scaffold_21644                   39866  0 -     72089 C
e Balaenoptera_bonaerensis.DF502048.1                        2202  0 -     13118 C
e Balaenoptera_acutorostrata.KI537095.1                  26376971  0 +  51448160 C
e Artibeus_jamaicensis.ArtJam_scaffold_41619                 5324  0 -     29036 C
e Antilocapra_americana.AntAmePen_scaffold_42841            27672  0 +     33004 C
e Anoura_caudifer.AnoCau_scaffold_422                      387228  0 -    631301 C
e Ammotragus_lervia.NIVO01013474.1                        3516766  0 +   4113121 C
e Ailurus_fulgens.LNAC01000003.1                          7090103  0 -  16596857 C
e Ailuropoda_melanoleuca.LNAT01000321.1                  10653601  0 +  23371972 C
e Acinonyx_jubatus.LLWD01000356.1                         2030268  0 +   3721120 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16291  1 -    119109 I
e Glis_glis.GliGli_scaffold_79770                            9127  0 -     18683 C
e Zapus_hudsonius.ZapHud_scaffold_64392                     12209  0 -     20485 C
e Jaculus_jaculus.JH725517.1                              8561799  0 +  11848649 C
e Hylobates_pileatus_b.LG03                                     92553610  0 - 189753342 C
e Allactaga_bullata.AllBul_scaffold_70162                    8837  0 -     22067 C
e Microtus_ochrogaster.CM001673.1                        22815303  0 -  98408828 C
e Xerus_inauris.XerIna_scaffold_7898                       123352  0 -    134049 C
e Tupaia_tana.TupTan_flattened_line_3657864                   226  0 +       342 C
e Tupaia_chinensis.KB320831.1                             2787254  0 -   3938065 C
e Spermophilus_dauricus.KZ294190.1                        2236158  0 +   2842873 C
e Sigmodon_hispidus.SigHis_scaffold_11332                   94308  0 -    120886 C
e Rattus_norvegicus.chr11                                13911014  0 +  90463843 C
e Psammomys_obesus.NESX01026517.1                           29070  0 +     77221 C
e Peromyscus_maniculatus.KI615518.1                       4946225  0 -   8017169 C
e Otolemur_garnettii.GL873528.1                          18004869 68 -  38779656 I
e Otolemur_crassicaudatus.k141_321880                       35431 68 +     38679 I
e Onychomys_torridus.OnyTor_scaffold_12578                  33056  0 +     62360 C
e Ondatra_zibethicus.OndZib_scaffold_6821                  121121  5 +    145789 I
e Octodon_degus.JH651621.1                                3675020  1 +  10294119 I
e Nannospalax_galili.KL201303.1                            107269  0 +    362372 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     86470  1 -    117718 I
e Muscardinus_avellanarius.MusAve_scaffold_9643              7005  0 +     98495 C
e Mus_spretus.CM004110.1                                 74324187  0 +  97876770 C
e Mus_pahari.LT608305.1                                  67549088  0 +  89017189 C
e Mus_musculus.chr16                                     75484549  0 +  98207768 C
e Mus_caroli.LT608236.1                                  70761474  0 +  92629107 C
e Mesocricetus_auratus.KB708139.1                         1042938  0 -  26018355 C
e Meriones_unguiculatus.MerUng_scaffold_52233                8009  0 +     15977 C
e Marmota_marmota.CZRN01000005.1                         36870079  0 +  64221397 C
e Ictidomys_tridecemlineatus.JH393315.1                   7122232  0 +  13083262 C
e Hystrix_cristata.HysCri_scaffold_50788                     2546  0 +     22540 C
e Heterocephalus_glaber.JH602058.1                        2547562  0 +  31725842 C
e Graphiurus_murinus.GraMur_scaffold_4493                   73684  0 +    118900 C
e Galagoides_demidoff.k141_1769638                           6763 68 +     27357 I
e Galago_senegalensis.k141_964197                            9743 68 -     43889 I
e Galago_moholi.ctg555                                     207363 68 -    847004 I
e Fukomys_damarensis.KN123630.1                          13889453  0 -  19261668 C
e Ellobius_talpinus.LOJH01090055.1                           2652  0 -      7838 C
e Ellobius_lutescens.LOEQ01003611.1                        235642  0 -    369425 C
e Dolichotis_patagonum.DolPat_scaffold_14102                33375  0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             56104 16 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                14631 16 +     26546 I
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 26889  1 -     67205 I
e Ctenodactylus_gundi.CteGun_scaffold_447                  204706  0 -    956709 C
e Cricetulus_griseus.LT883672.1                          53025429  0 +  72327488 C
e Cricetomys_gambianus.CriGam_scaffold_949                 273987  0 -    399297 C
e Chinchilla_lanigera.JH721867.1                         15957878  1 +  43084221 I
e Cavia_tschudii.CavTsc_scaffold_488                       173989  0 +    436027 C
e Cavia_porcellus.DS562889.1                             15795798  0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15783848 16 -  24422027 I
e Castor_canadensis.CasCan_scaffold_47037                   27015  0 +     33760 C
e Capromys_pilorides.CapPil_scaffold_647363                   728  1 +      1887 I
e Acomys_cahirinus.AcoCah_scaffold_1625                    108549  0 -    189883 C
e Nomascus_siki_b.tarseq_80                             20456  0 -  18771707 C
e Nomascus_annamensis.k141_745421                             374  0 -      4569 C
e Nomascus_gabriellae.k141_1350167                            785  0 +      9928 C

a score=0.000000
s hg38.chr4_GL000008v2_random                                8169 1 +    209709 t
s Acinonyx_jubatus.LLWD01000356.1                         2030268 1 +   3721120 a
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    108549 1 -    189883 A
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10653601 1 +  23371972 C
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7090103 1 -  16596857 C
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                    8837 1 -     22067 T
i Allactaga_bullata.AllBul_scaffold_70162               C 0 I 2
s Allenopithecus_nigroviridis.k141_3103707                  59191 1 +     61638 T
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        50999 1 +     53391 T
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         1723 1 +     72529 T
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          1299 1 +      3797 T
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             6393 1 -     18050 T
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  7510 1 -     11521 T
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              7068 1 -     21359 T
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1856473                                5451 1 +      7227 T
i Alouatta_juara.k141_1856473                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          6366 1 -     10438 T
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            3020 1 +      7047 T
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             6304 1 +     10410 T
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_390786                             7581 1 -      7615 T
i Alouatta_puruensis.k141_390786                        C 0 C 0
s Alouatta_seniculus.k141_990213                             3025 1 +      6429 T
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3516766 1 +   4113121 C
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      387228 1 -    631301 A
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            27672 1 +     33004 C
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 58699 1 +     78111 T
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            1630 1 +     22701 T
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5745590 1 +   9889416 t
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             2182 1 -    104377 T
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               2182 1 +     23246 T
i Aotus_vociferans.k141_718647                          C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      14482 1 +     17483 T
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 5324 1 -     29036 A
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9535443 1 +  39197703 T
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             56731 1 +     85812 T
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 7728 1 +     89302 T
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             12237 1 -     58268 T
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             60225 1 +    119057 T
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               2176 1 -     25888 T
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 3035 1 -     16375 t
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_767228                               9007 1 -      9688 t
i Avahi_peyrierasi.k141_767228                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26376971 1 +  51448160 C
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        2202 1 -     13118 C
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   39866 1 -     72089 C
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6556288 1 +   6870073 C
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138136519 1 - 161108492 C
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     568897 1 -    998990 C
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136292252 1 - 158972876 C
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1227873 1 -   1914593 C
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               110100 1 -    171031 T
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                  9126 1 +    125063 T
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                11174 1 -    216513 T
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        3713 1 -    134917 T
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3216006 1 -   8989139 C
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           394193 1 -  15254737 C
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2969927 1 +   6889770 C
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11514989 1 +  39901454 C
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   10006 1 +     87036 C
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11261648 1 -  35597290 C
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11084177 1 +  39895921 C
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16451211 1 -  44759192 C
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21321873 1 + 157394656 C
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135703100 1 - 157403528 C
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_647363                   729 1 +      1887 T
i Capromys_pilorides.CapPil_scaffold_647363             I 1 C 0
s Carlito_syrichta.NW_007248099.1                          305483 1 +    345090 G
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               56405 1 +     67245 A
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   155722 1 -    276539 C
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18886911 1 -  29618158 T
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 4457 1 -     26817 T
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                 8697 1 +     25043 T
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         4519 1 +     21754 G
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4359534 1 +   7569818 c
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_305802         1176 1 +      1857 C
i Ceratotherium_simum_cottoni.CerCot_scaffold_305802    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6550987 1 +   6739814 t
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      52464 1 -     54931 T
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         17448 1 -     19697 t
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         54979 1 -    107033 T
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        1422 1 -      3853 T
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          25354 1 +     30494 T
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           1377 1 -      4022 T
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          1267 1 -      3505 T
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           20078 1 +     35983 T
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11985854 1 +  12117833 T
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46473350 1 +  46592721 T
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      31177 1 +     33420 T
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        1213 1 -      3443 T
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      2204 1 -      4669 T
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        2008 1 -      4411 T
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         1528 1 -      4205 T
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           55371 1 -     68416 t
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            4421 1 +     13308 t
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             1710 1 -     18223 T
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             18733 1 +     25473 T
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           37772 1 +     57117 T
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          42447 1 +     54541 T
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15957879 1 +  43084221 T
i Chinchilla_lanigera.JH721867.1                        I 1 C 0
s Chiropotes_israelita.k141_1189915                         67321 1 +    196370 T
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          11495 1 +     40510 T
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15134808 1 -  15256731 T
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      29854 1 -     53260 T
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101140302 1 + 101219884 t
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                13405 1 -     21363 G
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           758711 1 +    964067 g
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_141308              5490 1 -     12508 G
i Chrysochloris_asiatica.ChrAsi_scaffold_141308         N 0 C 0
s Colobus_angolensis.KN985967.1                          10878884 1 +  10971483 t
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147660043 1 + 156195979 T
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            12028 1 +     23629 T
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60609687 1 +  78930452 C
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         35792 1 -     40477 C
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 273987 1 -    399297 T
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             15617 1 -     19186 A
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            48298 1 -     70449 C
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  204706 1 -    956709 T
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 26890 1 -     67205 T
i Ctenomys_sociabilis.CteSoc_scaffold_19489             I 1 C 0
s Dasypus_novemcinctus.JH568778.1                          178583 1 -   6883506 T
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16841245 1 +  31942871 A
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80033710 1 -  96802777 C
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18695713 1 -  18957592 a
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 318842 1 +    993696 C
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_24487                 60997 1 +     62380 C
i Diceros_bicornis.DicBicMic_scaffold_24487             C 0 C 0
s Echinops_telfairi.JH980316.1                           22990745 1 -  44670279 A
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                  9083 1 +     24177 C
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1488412 1 +   1727528 A
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7803135 1 +  15467074 G
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85866910 1 +  99434291 C
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Equus_asinus.JREZ01000137.1                             2952102 1 -   4388051 C
i Equus_asinus.JREZ01000137.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13346113 1 +  41866177 C
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                           8105 1 +     92910 C
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erythrocebus_patas.Contig8                             48766987 1 -  48907691 T
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          311855 1 +    330699 C
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             58284 1 +     89355 C
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Felis_catus.CM001386.2                                129889248 1 - 159252932 a
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129276322 1 - 158578461 a
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 17457 1 +     52776 A
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               152700 1 +    324696 T
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    177925 1 -    189561 C
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                            9127 1 -     18683 t
i Glis_glis.GliGli_scaffold_79770                       C 0 I 1
s Gorilla_beringei.k141_111300                               1561 1 -     14630 T
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119648659 1 - 195582420 t
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   73684 1 +    118900 T
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 I 6
s Hapalemur_alaotrensis.k141_1198205                         1989 1 +      3980 t
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             24469 1 +     26611 t
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             1923 1 +     56096 t
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        25196 1 -     42470 t
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        41793 1 -     54384 t
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              13223 1 +     53719 C
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                24279 1 -     91191 C
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               52974 1 +     73687 G
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              143979 1 +    277961 C
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      275396 1 -    477199 C
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              4551 1 -      9143 C
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg649                                    98233 1 +    115816 T
i Hoolock_leuconedys.ctg649                                C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 12567 1 -     67322 C
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hylobates_abbotti.k141_493872                              1370 1 +      5897 T
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_282275                                583 1 +      1846 T
i Hylobates_agilis.k141_282275                          C 0 C 0
s Hylobates_klossii.k141_466549                              7828 1 +     11537 T
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_muelleri.k141_1133650                             805 1 -      2775 T
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     2546 1 +     22540 T
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7122232 1 +  13083262 t
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_3334527                                   8433 1 +      9207 t
i Indri_indri.k141_3334527                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               5637 1 +     17520 C
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8561799 1 +  11848649 T
i Jaculus_jaculus.JH725517.1                            C 0 I 2
s Kogia_breviceps.KogBre_flattened_line_35920               20469 1 +     37189 C
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          46286 1 -    147782 T
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   110588 1 -    115756 C
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258403472 1 - 285822530 t
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        20366 1 +     39228 t
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            49742 1 +     63517 t
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        74962 1 +    116806 t
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     28003 1 -     33031 t
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3082269 1 -   3498232 C
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lipotes_vexillifer.KE558548.1                            132816 1 +   3060487 C
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19244073 1 +  19376315 T
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            6986 1 +     84689 T
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3774744 1 +   6799190 T
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20587549 1 -  62548349 A
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11083633 1 +  39895028 C
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             15759 1 +     74745 T
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12702265 1 +  12821369 T
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               4358 1 +      6569 T
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           42658 1 +     63263 T
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_1068107                               11235 1 +     12679 T
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                 808 1 +      3017 T
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  42420 1 -     79256 T
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196031340 1 + 196197964 t
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11441444 1 +  11645122 t
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   1370 1 -     46448 T
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                1197 1 -      3617 T
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 11530 1 -     55006 T
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43836569 1 +  43892939 T
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                3792 1 -      5978 T
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               1372 1 -     27140 T
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43433233 1 -  43563597 T
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4446059 1 -   4543643 T
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            142882 1 +    252755 C
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             32947 1 +     58827 C
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36870079 1 +  64221397 t
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       61374 1 -    234502 C
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_1828            224467 1 -    226874 C
i Mellivora_capensis.MelCap_flattened_line_1828         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233                8009 1 +     15977 G
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 I 3
s Mesoplodon_bidens.MesBid_scaffold_183284                    508 1 +      2166 C
i Mesoplodon_bidens.MesBid_scaffold_183284              C 0 C 0
s Microcebus_murinus.CM007691.1                          16506587 1 +  47401472 t
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  27694 1 -     48017 A
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               19562 1 -     32043 A
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8206301 1 +  10048721 C
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            30978 1 +     45743 C
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        31907 1 +     34273 T
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         7567 1 -    104932 C
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     2001 1 +      8497 t
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 143235 1 +    154973 C
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                157882 1 +    265003 A
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 1509 1 -      4346 C
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  140918 1 -    168139 C
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          16099 1 -    100666 C
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70761474 1 +  92629107 T
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75484549 1 +  98207768 T
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67549088 1 +  89017189 C
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74324187 1 +  97876770 T
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              7005 1 +     98495 t
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 I 2
s Mustela_putorius.JH417978.1                             4419320 1 -  28371801 C
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     86471 1 -    117718 T
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 1 C 0
s Myotis_brandtii.KE161952.1                               964427 1 +   8389877 C
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5016104 1 +   6462685 T
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3462013 1 -   3747815 C
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         7210 1 +     66751 C
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             1964 1 -      8794 C
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            107269 1 +    362372 t
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               4272 1 +     48152 T
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4481168 1 -  14209539 C
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3947844 1 -   4490290 C
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  46215 1 +     94413 A
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                26629 1 +   3668941 C
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65563329 1 -  95554990 T
i Nycticebus_bengalensis.LG16                           C 0 I 3
s Nycticebus_coucang.k141_2051882                             174 1 +      6470 T
i Nycticebus_coucang.k141_2051882                       C 0 I 3
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65665699 1 +  89412551 T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Octodon_degus.JH651621.1                                3675021 1 +  10294119 t
i Octodon_degus.JH651621.1                              I 1 C 0
s Odobenus_rosmarus.KB229369.1                             675852 1 -   3126709 C
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1076635 1 +   1425656 A
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         33797 1 +     78940 C
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Orcinus_orca.KB316965.1                                 7221528 1 -   7562323 C
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              39762 1 -     66828 A
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      303964 1 -    505867 C
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Ovis_aries.CM001582.2                                 134074080 1 - 275406953 C
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      75294 1 +    140051 C
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127570903 1 - 205426864 t
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120148050 1 - 196562556 t
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  30411 1 +    295523 A
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3634015 1 +  18214204 a
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5023792 1 -   6340057 a
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1062795 1 -   1292953 C
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188152018 1 - 188283584 t
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            48230 1 +     76494 T
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47509414 1 +  47705337 T
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 63397 1 -    104429 T
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  13181 1 -     29451 T
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                33586 1 +     35859 T
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    111742 1 -    135482 C
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           1327 1 -     23713 T
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            20624 1 -     27972 T
i Perodicticus_potto.k141_713187                        C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            118145 1 -    122454 C
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           1273 1 -      3310 T
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       21179 1 -     82327 T
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           17930 1 +     19957 T
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26735939 1 +  26888534 t
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            93204 1 +    112873 T
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             39813 1 -     61926 T
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        21242 1 +     78826 T
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              5193 1 -     15800 T
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                         8391 1 -     16101 T
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          1700 1 +      9673 T
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13470694 1 -  19735023 T
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                            9602 1 -     31692 T
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           2212 1 +     21690 C
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       18966 1 +     44506 C
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        19184 1 +     67491 T
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                       9429 1 -     98129 C
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     19029 1 +    147771 C
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        19280 1 -     23762 C
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_2078842                         19228 1 -     19696 C
i Plecturocebus_dubius.k141_2078842                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         19102 1 +    152463 C
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      5859 1 +      8943 C
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                          8819 1 +    134592 C
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          19412 1 -     75465 C
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              183456 1 -    373494 t
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19803360 1 +  19899266 T
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               1509 1 -     15069 T
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              1643 1 +     14865 T
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                72838 1 +     78963 G
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6844845 1 +  12164890 T
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     13280 1 -     30946 t
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_diadema.k141_577245                           39315 1 +     52369 t
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         31704 1 -     44753 t
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            13626 1 +     27322 t
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       13270 1 -     53241 t
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         35541 1 -     48185 t
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           29070 1 +     77221 G
i Psammomys_obesus.NESX01026517.1                       C 0 I 3
s Pteronotus_parnellii.KE867983.1                             772 1 -     27784 a
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        241177 1 -    344369 C
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13242876 1 -  17261082 C
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             600830 1 -   3946241 C
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131530608 1 - 161321710 a
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             25634 1 +     56732 T
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6802124 1 +   6970761 T
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             1516 1 +     18040 T
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                12721 1 +     68503 A
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13911014 1 +  90463843 T
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1784478 1 +   2252614 c
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           12071 1 -     14454 T
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206373397 1 - 206558726 t
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44851045 1 -  45163003 T
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                16179 1 +    109198 C
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       4367 1 +     12214 C
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15668837 1 -  43202129 a
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                         712 1 +     34089 G
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                               643 1 -     60842 G
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                               712 1 +     67014 G
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                               712 1 +     60816 G
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                  640 1 -     76454 G
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17337220 1 -  30362882 T
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         16821 1 -     62485 T
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   28268 1 -    114521 C
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1527475                       24059 1 +     26421 T
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       4521 1 +     20762 T
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         38254 1 +     40653 T
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                            8813 1 -     12194 T
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     22232 1 -     27512 T
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         31253 1 -     33692 T
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            14494 1 +    739146 C
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2236158 1 +   2842873 t
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             230894 1 -    276980 C
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Symphalangus_syndactylus.tarseq_24                     13898183 1 +  13920577 T
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               2700 1 -      6213 T
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               11642 1 +     45698 C
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      803639 1 +   1148477 C
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  54298 1 +     99546 C
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               22972 1 +     42269 G
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               56280 1 +     65473 G
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194003553 1 - 194193292 t
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                   508 1 +      6782 T
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  132775 1 -    259118 A
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        22631 1 +     38948 T
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   16358 1 -     32910 T
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       22256 1 +     24652 T
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      1141 1 -      3559 T
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           39080 1 -     54611 T
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       15079 1 +     17312 T
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    22449 1 -     25040 T
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          1115 1 +      3528 T
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  47477 1 +     51589 T
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       10645 1 +     14732 T
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       1123 1 -     28054 T
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44655918 1 -  44834318 T
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                         928 1 +      3372 T
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   2131 1 +     90398 C
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 I 2
s Trichechus_manatus.JH594618.1                          16078230 1 +  31416278 C
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2787254 1 -   3938065 t
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_3657864                   226 1 +       342 t
i Tupaia_tana.TupTan_flattened_line_3657864             C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69310246 1 -  96451834 C
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 23456 1 -     25548 C
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6510876 1 +  28682327 C
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Vicugna_pacos.KN269600.1                                1521559 1 -   2331223 C
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                134029 1 -    281493 C
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       123352 1 -    134049 t
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        210579 1 -    227762 C
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     12209 1 -     20485 T
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 I 2
s Ziphius_cavirostris.ZipCav_flattened_line_127025           3749 1 -      8775 C
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Sus_scrofa.CM000824.4                                 189268785 0 + 218635234 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16291 1 -    119109 I
e Hylobates_pileatus_b.LG03                                     92553610 0 - 189753342 C
e Microtus_ochrogaster.CM001673.1                        22815303 0 -  98408828 C
e Varecia_variegata.k141_775891                             21336 0 -     33872 C
e Varecia_rubra.k141_432109                                  1791 0 -     20643 C
e Sigmodon_hispidus.SigHis_scaffold_11332                   94308 0 -    120886 C
e Peromyscus_maniculatus.KI615518.1                       4946225 0 -   8017169 C
e Otolemur_garnettii.GL873528.1                          18004869 68 -  38779656 I
e Otolemur_crassicaudatus.k141_321880                       35431 68 +     38679 I
e Onychomys_torridus.OnyTor_scaffold_12578                  33056 0 +     62360 C
e Ondatra_zibethicus.OndZib_scaffold_6821                  121121 5 +    145789 I
e Mesocricetus_auratus.KB708139.1                         1042938 0 -  26018355 C
e Heterocephalus_glaber.JH602058.1                        2547562 0 +  31725842 C
e Galagoides_demidoff.k141_1769638                           6763 68 +     27357 I
e Galago_senegalensis.k141_964197                            9743 68 -     43889 I
e Galago_moholi.ctg555                                     207363 68 -    847004 I
e Fukomys_damarensis.KN123630.1                          13889453 0 -  19261668 C
e Eulemur_sanfordi.k141_186399                              12220 0 -     29447 C
e Eulemur_rufus.k141_1620292                                29497 0 +     46535 C
e Eulemur_rubriventer.k141_411740                           14763 0 +     26808 C
e Eulemur_mongoz.k141_825972                                12307 0 +     27497 C
e Eulemur_macaco.k141_1341545                               12030 0 +     16540 C
e Eulemur_fulvus.k141_653297                                 7656 0 +    109717 C
e Eulemur_flavifrons.k141_903901                             4168 0 +     60246 C
e Eulemur_coronatus.k141_3240342                             7851 0 +     36558 C
e Eulemur_collaris.k141_311830                               1381 0 -      6809 C
e Eulemur_albifrons.k141_715837                              1444 0 +     13586 C
e Ellobius_talpinus.LOJH01090055.1                           2652 0 -      7838 C
e Ellobius_lutescens.LOEQ01003611.1                        235642 0 -    369425 C
e Dolichotis_patagonum.DolPat_scaffold_14102                33375 0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             56104 16 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                14631 16 +     26546 I
e Cricetulus_griseus.LT883672.1                          53025429 0 +  72327488 C
e Cavia_tschudii.CavTsc_scaffold_488                       173989 0 +    436027 C
e Cavia_porcellus.DS562889.1                             15795798 0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15783848 16 -  24422027 I
e Castor_canadensis.CasCan_scaffold_47037                   27015 0 +     33760 C
e Nomascus_siki_b.tarseq_80                             20456 0 -  18771707 C
e Nomascus_annamensis.k141_745421                             374 0 -      4569 C
e Nomascus_gabriellae.k141_1350167                            785 0 +      9928 C

a score=0.000000
s hg38.chr4_GL000008v2_random                                8170 1 +    209709 g
s Allenopithecus_nigroviridis.k141_3103707                  59192 1 +     61638 G
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        51000 1 +     53391 G
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         1724 1 +     72529 G
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          1300 1 +      3797 G
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             6394 1 -     18050 G
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  7511 1 -     11521 G
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              7069 1 -     21359 G
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1856473                                5452 1 +      7227 G
i Alouatta_juara.k141_1856473                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          6367 1 -     10438 G
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            3021 1 +      7047 G
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             6305 1 +     10410 G
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_390786                             7582 1 -      7615 G
i Alouatta_puruensis.k141_390786                        C 0 C 0
s Alouatta_seniculus.k141_990213                             3026 1 +      6429 G
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Aotus_azarae.k141_3170768                                 58700 1 +     78111 G
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            1631 1 +     22701 G
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5745591 1 +   9889416 g
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             2183 1 -    104377 G
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               2183 1 +     23246 G
i Aotus_vociferans.k141_718647                          C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      14483 1 +     17483 T
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9535444 1 +  39197703 G
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             56732 1 +     85812 G
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 7729 1 +     89302 G
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             12238 1 -     58268 G
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             60226 1 +    119057 G
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               2177 1 -     25888 G
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 3036 1 -     16375 G
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_767228                               9008 1 -      9688 G
i Avahi_peyrierasi.k141_767228                          C 0 C 0
s Cacajao_ayresi.k141_724503                               110101 1 -    171031 G
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                  9127 1 +    125063 G
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                11175 1 -    216513 G
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        3714 1 -    134917 G
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Cebus_albifrons.Contig22                               18886912 1 -  29618158 G
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 4458 1 -     26817 G
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                 8698 1 +     25043 G
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cercocebus_atys.KQ010443.1                              6550988 1 +   6739814 g
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      52465 1 -     54931 G
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         17449 1 -     19697 g
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         54980 1 -    107033 G
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        1423 1 -      3853 G
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          25355 1 +     30494 G
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           1378 1 -      4022 G
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          1268 1 -      3505 G
i Cercopithecus_hamlyni.k141_381099                     C 0 I 2
s Cercopithecus_lowei.k141_623764                           20079 1 +     35983 G
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11985855 1 +  12117833 G
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46473351 1 +  46592721 A
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      31178 1 +     33420 G
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        1214 1 -      3443 G
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      2205 1 -      4669 G
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        2009 1 -      4411 G
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         1529 1 -      4205 G
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           55372 1 -     68416 G
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            4422 1 +     13308 G
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             1711 1 -     18223 G
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             18734 1 +     25473 G
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           37773 1 +     57117 G
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          42448 1 +     54541 G
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chiropotes_israelita.k141_1189915                         67322 1 +    196370 G
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          11496 1 +     40510 G
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15134809 1 -  15256731 G
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      29855 1 -     53260 G
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101140303 1 + 101219884 g
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10878885 1 +  10971483 g
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147660044 1 + 156195979 G
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            12029 1 +     23629 G
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16841246 1 +  31942871 G
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Erythrocebus_patas.Contig8                             48766988 1 -  48907691 G
i Erythrocebus_patas.Contig8                            C 0 C 0
s Gorilla_beringei.k141_111300                               1562 1 -     14630 G
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119648660 1 - 195582420 g
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                         1990 1 +      3980 G
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             24470 1 +     26611 G
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             1924 1 +     56096 G
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        25197 1 -     42470 G
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        41794 1 -     54384 G
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Hoolock_leuconedys.ctg649                                    98234 1 +    115816 G
i Hoolock_leuconedys.ctg649                                C 0 C 0
s Hylobates_abbotti.k141_493872                              1371 1 +      5897 G
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_282275                                584 1 +      1846 G
i Hylobates_agilis.k141_282275                          C 0 C 0
s Hylobates_klossii.k141_466549                              7829 1 +     11537 G
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_muelleri.k141_1133650                             806 1 -      2775 G
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Indri_indri.k141_3334527                                   8434 1 +      9207 G
i Indri_indri.k141_3334527                              C 0 C 0
s Lagothrix_lagothricha.k141_12968                          46287 1 -    147782 G
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lemur_catta.scaffold_1                                258403473 1 - 285822530 G
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        20367 1 +     39228 G
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            49743 1 +     63517 G
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        74963 1 +    116806 G
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     28004 1 -     33031 T
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Lophocebus_aterrimus.ctg55                             19244074 1 +  19376315 G
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            6987 1 +     84689 G
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3774745 1 +   6799190 G
i Loris_tardigradus.ctg97                               C 0 C 0
s Macaca_arctoides.k141_2201161                             15760 1 +     74745 G
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12702266 1 +  12821369 G
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               4359 1 +      6569 G
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           42659 1 +     63263 G
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_1068107                               11236 1 +     12679 G
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                 809 1 +      3017 G
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  42421 1 -     79256 G
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196031341 1 + 196197964 g
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11441445 1 +  11645122 g
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   1371 1 -     46448 G
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                1198 1 -      3617 G
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 11531 1 -     55006 G
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43836570 1 +  43892939 G
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                3793 1 -      5978 G
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               1373 1 -     27140 G
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43433234 1 -  43563597 G
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4446060 1 -   4543643 G
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Microcebus_murinus.CM007691.1                          16506588 1 +  47401472 g
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        31908 1 +     34273 G
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirza_zaza.k141_226143                                     2002 1 +      8497 G
i Mirza_zaza.k141_226143                                C 0 C 0
s Nasalis_larvatus.k141_153429                               4273 1 +     48152 G
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Nycticebus_bengalensis.LG16                            65563333 1 -  95554990 G
i Nycticebus_bengalensis.LG16                           I 3 C 0
s Nycticebus_coucang.k141_2051882                             178 1 +      6470 G
i Nycticebus_coucang.k141_2051882                       I 3 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65665700 1 +  89412551 G
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Pan_paniscus.CM003386.1                               127570904 1 - 205426864 g
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120148051 1 - 196562556 g
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Papio_anubis.CM001492.2                               188152019 1 - 188283584 g
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            48231 1 +     76494 G
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47509415 1 +  47705337 G
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 63398 1 -    104429 G
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  13182 1 -     29451 G
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                33587 1 +     35859 G
i Papio_ursinus.k141_3762866                            C 0 C 0
s Perodicticus_ibeanus.k141_117958                           1328 1 -     23713 G
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            20625 1 -     27972 G
i Perodicticus_potto.k141_713187                        C 0 C 0
s Piliocolobus_badius.k141_1497351                           1274 1 -      3310 G
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       21180 1 -     82327 G
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           17931 1 +     19957 G
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26735940 1 +  26888534 g
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pithecia_albicans.k141_991845                             39814 1 -     61926 G
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        21243 1 +     78826 G
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              5194 1 -     15800 G
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                         8392 1 -     16101 G
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          1701 1 +      9673 G
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13470695 1 -  19735023 G
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                            9603 1 -     31692 G
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       18967 1 +     44506 G
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        19185 1 +     67491 G
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                       9430 1 -     98129 G
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     19030 1 +    147771 G
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        19281 1 -     23762 G
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_2078842                         19229 1 -     19696 G
i Plecturocebus_dubius.k141_2078842                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         19103 1 +    152463 G
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      5860 1 +      8943 G
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                          8820 1 +    134592 G
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          19413 1 -     75465 G
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              183457 1 -    373494 g
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19803361 1 +  19899266 G
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               1510 1 -     15069 G
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              1644 1 +     14865 G
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6844846 1 +  12164890 G
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     13281 1 -     30946 g
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_diadema.k141_577245                           39316 1 +     52369 G
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         31705 1 -     44753 G
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            13627 1 +     27322 G
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       13271 1 -     53241 G
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         35542 1 -     48185 G
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Pygathrix_cinerea.k141_374971                             25635 1 +     56732 G
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6802125 1 +   6970761 G
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             1517 1 +     18040 G
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rhinopithecus_bieti.k119_102124                           12072 1 -     14454 G
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206373398 1 - 206558726 g
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44851046 1 -  45163003 G
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15668838 1 -  43202129 g
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                         713 1 +     34089 G
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                               644 1 -     60842 G
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                               713 1 +     67014 G
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                               713 1 +     60816 G
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                  641 1 -     76454 G
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17337221 1 -  30362882 G
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         16822 1 -     62485 G
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Semnopithecus_entellus.k141_1527475                       24060 1 +     26421 G
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       4522 1 +     20762 G
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         38255 1 +     40653 G
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                            8814 1 -     12194 G
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     22233 1 -     27512 G
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         31254 1 -     33692 G
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Symphalangus_syndactylus.tarseq_24                     13898184 1 +  13920577 G
i Symphalangus_syndactylus.tarseq_24                    C 0 I 46
s Theropithecus_gelada.CM009951.1                       194003554 1 - 194193292 g
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Trachypithecus_auratus.k141_738098                        22632 1 +     38948 G
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   16359 1 -     32910 G
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       22257 1 +     24652 G
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      1142 1 -      3559 G
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           39081 1 -     54611 G
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       15080 1 +     17312 G
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    22450 1 -     25040 G
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          1116 1 +      3528 G
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  47478 1 +     51589 G
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       10646 1 +     14732 G
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       1124 1 -     28054 G
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44655919 1 -  44834318 G
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                         929 1 +      3372 G
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_141308              5491 0 -     12508 C
e Ziphius_cavirostris.ZipCav_flattened_line_127025           3750 0 -      8775 C
e Zalophus_californianus.ZalCal_flattened_line_4097        210580 0 -    227762 C
e Vulpes_lagopus.VulLag_flattened_line_2045                134030 0 -    281493 C
e Vicugna_pacos.KN269600.1                                1521560 0 -   2331223 C
e Ursus_maritimus.KK498671.1                              6510877 0 +  28682327 C
e Uropsilus_gracilis.UroGra_scaffold_4143_0                 23457 0 -     25548 C
e Tursiops_truncatus.MRVK01000923.1                      69310247 0 -  96451834 C
e Trichechus_manatus.JH594618.1                          16078231 0 +  31416278 C
e Tragulus_javanicus.TraJav_scaffold_14717                   2132 2 +     90398 I
e Tonatia_saurophila.TonSau_scaffold_3334                  132776 0 -    259118 C
e Tolypeutes_matacus.TolMat_scaffold_269431                   509 0 +      6782 C
e Tapirus_terrestris.TapTer_scaffold_14939                  54299 0 +     99546 C
e Tapirus_indicus.TapInd_scaffold_176                      803640 0 +   1148477 C
e Tamandua_tetradactyla.TamTet_scaffold_26877               11643 0 +     45698 C
e Tadarida_brasiliensis.TadBra_scaffold_145589               2701 0 -      6213 C
e Sus_scrofa.CM000824.4                                 189268785 0 + 218635234 C
e Spilogale_gracilis.SpiGra_flattened_line_905             230895 0 -    276980 C
e Solenodon_paradoxus.SolPar_flattened_line_1012            14495 0 +    739146 C
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   28269 0 -    114521 C
e Saiga_tatarica.SaiTat_scaffold_82192                       4368 0 +     12214 C
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                16180 0 +    109198 C
e Rhinolophus_sinicus.LVEH01000179.1                      1784479 0 +   2252614 C
e Rangifer_tarandus.RanTarSib_scaffold_24239                12722 0 +     68503 C
e Puma_concolor.QAVW01000427.1                          131530609 0 - 161321710 C
e Pteropus_vampyrus.KN525959.1                             600831 0 -   3946241 C
e Pteropus_alecto.KB031157.1                             13242877 0 -  17261082 C
e Pteronura_brasiliensis.PteBra_flattened_line_1343        241178 0 -    344369 C
e Pteronotus_parnellii.KE867983.1                             773 0 -     27784 C
e Procavia_capensis.ProCapCap_scaffold_15315                72839 0 +     78963 C
e Platanista_gangetica.PlaMin_flattened_line_72990           2213 0 +     21690 C
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            93205 0 +    112873 C
e Phocoena_phocoena.PhoPho_flattened_line_11948            118146 0 -    122454 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    111743 0 -    135482 C
e Pantholops_hodgsonii.KE114631.1                         1062796 0 -   1292953 C
e Panthera_tigris.KE721879.1                              5023793 0 -   6340057 C
e Panthera_pardus.KV860323.1                              3634016 0 +  18214204 C
e Panthera_onca.PanOnc_flattened_line_1615                  30412 0 +    295523 C
e Ovis_canadensis.OviCan_scaffold_6251                      75295 0 +    140051 C
e Ovis_aries.CM001582.2                                 134074081 0 - 275406953 C
e Otocyon_megalotis.JAEUCK010005121.1                      303965 0 -    505867 C
e Orycteropus_afer.OryAfe_flattened_line_13509              39763 0 -     66828 C
e Orcinus_orca.KB316965.1                                 7221529 0 -   7562323 C
e Okapia_johnstoni.LVCL01S0017931.1                         33798 0 +     78940 C
e Odocoileus_virginianus.KZ101650.1                       1076636 0 +   1425656 C
e Odobenus_rosmarus.KB229369.1                             675853 0 -   3126709 C
e Nyctereutes_procyonoides.CAJHUB010000786.1                26630 0 +   3668941 C
e Noctilio_leporinus.NocLep_scaffold_12062                  46216 0 +     94413 C
e Neophocaena_asiaeorientalis.KZ688543.1                  3947845 0 -   4490290 C
e Neomonachus_schauinslandi.NINY01007774.1                4481169 0 -  14209539 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             1965 0 -      8794 C
e Myotis_myotis.MyoMyo_scaffold_6123                         7211 0 +     66751 C
e Myotis_lucifugus.GL429887.1                             3462014 0 -   3747815 C
e Myotis_davidii.KB114863.1                               5016105 0 +   6462685 C
e Myotis_brandtii.KE161952.1                               964428 0 +   8389877 C
e Mustela_putorius.JH417978.1                             4419321 0 -  28371801 C
e Murina_feae.MurFea_scaffold_2254                          16100 0 -    100666 C
e Mungos_mungo.MunMun_flattened_line_8729                  140919 0 -    168139 C
e Moschus_moschiferus.MosMos_scaffold_146101                 1510 0 -      4346 C
e Mormoops_blainvillei.MorMeg_scaffold_2952                157883 0 +    265003 C
e Monodon_monoceros.MonMon_M_scaffold_5598                 143236 0 +    154973 C
e Mirounga_angustirostris.MirAng_flattened_line_8852         7568 0 -    104932 C
e Miniopterus_schreibersii.MinSch_scaffold_24116            30979 0 +     45743 C
e Miniopterus_natalensis.LDJU01000022.1                   8206302 0 +  10048721 C
e Micronycteris_hirsuta.MicHir_scaffold_37978               19563 0 -     32043 C
e Microgale_talazaci.MicTal_scaffold_34660                  27695 0 -     48017 C
e Mesoplodon_bidens.MesBid_scaffold_183284                    509 0 +      2166 C
e Mellivora_capensis.MelCap_flattened_line_1828            224468 0 -    226874 C
e Megaderma_lyra.MegLyr_scaffold_3562                       61375 0 -    234502 C
e Manis_pentadactyla.KN017078.1                             32948 0 +     58827 C
e Manis_javanica.JSZB01003966.1                            142883 0 +    252755 C
e Lycaon_pictus.CM007556.1                               11083634 0 +  39895028 C
e Loxodonta_africana.GL010040.1                          20587550 0 -  62548349 C
e Lipotes_vexillifer.KE558548.1                            132817 0 +   3060487 C
e Leptonychotes_weddellii.KB714749.1                      3082270 0 -   3498232 C
e Lasiurus_borealis.LasBor_scaffold_5102                   110589 0 -    115756 C
e Kogia_breviceps.KogBre_flattened_line_35920               20470 0 +     37189 C
e Inia_geoffrensis.IniGeo_flattened_line_66725               5638 0 +     17520 C
e Hyaena_hyaena.HyaHya_flattened_line_20729                 12568 0 -     67322 C
e Hipposideros_galeritus.HipGal_scaffold_104691              4552 0 -      9143 C
e Hipposideros_armiger.JXIK01001085.1                      275397 0 -    477199 C
e Hippopotamus_amphibius.HipAmp_scaffold_1308              143980 0 +    277961 C
e Heterohyrax_brucei.HetBruBak_scaffold_25354               52975 0 +     73687 C
e Hemitragus_hylocrius.HemHyl_scaffold_16669                24280 0 -     91191 C
e Helogale_parvula.HelPar_flattened_line_22962              13224 0 +     53719 C
e Giraffa_tippelskirchi.LVKQ01S012154.1                    177926 0 -    189561 C
e Felis_nigripes.FelNig_flattened_line_8080                 17458 0 +     52776 C
e Felis_catus_fca126.CM031420.1                         129276323 0 - 158578461 C
e Eubalaena_japonica.EubJap_flattened_line_7756             58285 0 +     89355 C
e Eschrichtius_robustus.EscRob_flattened_line_685          311856 0 +    330699 C
e Equus_przewalskii.ATBW01073585.1                           8106 0 +     92910 C
e Equus_caballus.CM000402.2                              13346114 0 +  41866177 C
e Equus_asinus.JREZ01000137.1                             2952103 0 -   4388051 C
e Enhydra_lutris.KZ291749.1                              85866911 0 +  99434291 C
e Elephantulus_edwardii.JH947210.1                        7803136 0 +  15467074 C
e Elaphurus_davidianus.JRFZ01086400.1                     1488413 0 +   1727528 C
e Eidolon_helvum.KE772537.1                                  9084 0 +     24177 C
e Echinops_telfairi.JH980316.1                           22990746 0 -  44670279 C
e Diceros_bicornis.DicBicMic_scaffold_24487                 60998 0 +     62380 C
e Dicerorhinus_sumatrensis.PEKH010003161.1                 318843 0 +    993696 C
e Desmodus_rotundus.KZ672188.1                           18695714 0 -  18957592 C
e Delphinapterus_leucas.KZ290064.1                       80033711 0 -  96802777 C
e Dasypus_novemcinctus.JH568778.1                          178584 0 -   6883506 C
e Cryptoprocta_ferox.CryFer_flattened_line_19014            48299 0 -     70449 C
e Crocidura_indochinensis.CroInd_scaffold_38409             15618 0 -     19186 C
e Craseonycteris_thonglongyai.CraTho_scaffold_22679         35793 0 -     40477 C
e Condylura_cristata.JH655880.1                          60609688 0 +  78930452 C
e Choloepus_hoffmanni.KN194586.1                           758712 0 +    964067 C
e Choloepus_didactylus.ChoDid_scaffold_36182                13406 0 -     21363 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_305802         1177 0 +      1857 C
e Catagonus_wagneri.CatWag_scaffold_1305                   155723 0 -    276539 C
e Carollia_perspicillata.CarPer_scaffold_4436               56406 0 +     67245 C
e Capra_hircus.CM004562.1                               135703101 0 - 157403528 C
e Capra_aegagrus.CM003214.1                              21321874 0 + 157394656 C
e Canis_lupus_orion.HG994411.1                           16451212 0 -  44759192 C
e Canis_lupus_familiaris.chr31                           11084178 0 +  39895921 C
e Canis_lupus_dingo.QKWQ01001993.1                       11261649 0 -  35597290 C
e Canis_lupus_VD.CanFam_VD_scaffold_16982                   10007 0 +     87036 C
e CanFam4.chr31                                          11514990 0 +  39901454 C
e Camelus_ferus.KB016973.1                                2969928 0 +   6889770 C
e Camelus_dromedarius.KN271192.1                           394194 0 -  15254737 C
e Camelus_bactrianus.KN276303.1                           3216007 0 -   8989139 C
e Bubalus_bubalis.KI419065.1                              1227874 0 -   1914593 C
e Bos_taurus.CM000177.6                                 136292253 0 - 158972876 C
e Bos_mutus.JH883513.1                                     568898 0 -    998990 C
e Bos_indicus.CM003021.1                                138136520 0 - 161108492 C
e Bison_bison.KN264915.1                                  6556289 0 +   6870073 C
e Beatragus_hunteri.BeaHun_scaffold_21644                   39867 0 -     72089 C
e Balaenoptera_bonaerensis.DF502048.1                        2203 0 -     13118 C
e Balaenoptera_acutorostrata.KI537095.1                  26376972 0 +  51448160 C
e Artibeus_jamaicensis.ArtJam_scaffold_41619                 5325 0 -     29036 C
e Antilocapra_americana.AntAmePen_scaffold_42841            27673 0 +     33004 C
e Anoura_caudifer.AnoCau_scaffold_422                      387229 0 -    631301 C
e Ammotragus_lervia.NIVO01013474.1                        3516767 0 +   4113121 C
e Ailurus_fulgens.LNAC01000003.1                          7090104 0 -  16596857 C
e Ailuropoda_melanoleuca.LNAT01000321.1                  10653602 0 +  23371972 C
e Acinonyx_jubatus.LLWD01000356.1                         2030269 0 +   3721120 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16291 1 -    119109 I
e Glis_glis.GliGli_scaffold_79770                            9128 1 -     18683 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     12210 2 -     20485 I
e Jaculus_jaculus.JH725517.1                              8561800 2 +  11848649 I
e Hylobates_pileatus_b.LG03                                     92553610 0 - 189753342 C
e Allactaga_bullata.AllBul_scaffold_70162                    8838 2 -     22067 I
e Galeopterus_variegatus.GalVar_scaffold_354               152701 0 +    324696 C
e Microtus_ochrogaster.CM001673.1                        22815303 0 -  98408828 C
e Xerus_inauris.XerIna_scaffold_7898                       123353 0 -    134049 C
e Varecia_variegata.k141_775891                             21336 0 -     33872 C
e Varecia_rubra.k141_432109                                  1791 0 -     20643 C
e Tupaia_tana.TupTan_flattened_line_3657864                   227 0 +       342 C
e Tupaia_chinensis.KB320831.1                             2787255 0 -   3938065 C
e Tarsius_wallacei.k141_48636                               56281 0 +     65473 C
e Tarsius_lariang.k141_609102                               22973 0 +     42269 C
e Spermophilus_dauricus.KZ294190.1                        2236159 0 +   2842873 C
e Sigmodon_hispidus.SigHis_scaffold_11332                   94308 0 -    120886 C
e Rattus_norvegicus.chr11                                13911015 0 +  90463843 C
e Psammomys_obesus.NESX01026517.1                           29071 3 +     77221 I
e Peromyscus_maniculatus.KI615518.1                       4946225 0 -   8017169 C
e Otolemur_garnettii.GL873528.1                          18004869 68 -  38779656 I
e Otolemur_crassicaudatus.k141_321880                       35431 68 +     38679 I
e Onychomys_torridus.OnyTor_scaffold_12578                  33056 0 +     62360 C
e Ondatra_zibethicus.OndZib_scaffold_6821                  121121 5 +    145789 I
e Octodon_degus.JH651621.1                                3675022 0 +  10294119 C
e Nannospalax_galili.KL201303.1                            107270 0 +    362372 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     86472 0 -    117718 C
e Muscardinus_avellanarius.MusAve_scaffold_9643              7006 2 +     98495 I
e Mus_spretus.CM004110.1                                 74324188 0 +  97876770 C
e Mus_pahari.LT608305.1                                  67549089 0 +  89017189 C
e Mus_musculus.chr16                                     75484550 0 +  98207768 C
e Mus_caroli.LT608236.1                                  70761475 0 +  92629107 C
e Mesocricetus_auratus.KB708139.1                         1042938 0 -  26018355 C
e Meriones_unguiculatus.MerUng_scaffold_52233                8010 3 +     15977 I
e Marmota_marmota.CZRN01000005.1                         36870080 0 +  64221397 C
e Ictidomys_tridecemlineatus.JH393315.1                   7122233 0 +  13083262 C
e Hystrix_cristata.HysCri_scaffold_50788                     2547 0 +     22540 C
e Heterocephalus_glaber.JH602058.1                        2547562 0 +  31725842 C
e Graphiurus_murinus.GraMur_scaffold_4493                   73685 6 +    118900 I
e Galagoides_demidoff.k141_1769638                           6763 68 +     27357 I
e Galago_senegalensis.k141_964197                            9743 68 -     43889 I
e Galago_moholi.ctg555                                     207363 68 -    847004 I
e Fukomys_damarensis.KN123630.1                          13889453 0 -  19261668 C
e Eulemur_sanfordi.k141_186399                              12220 0 -     29447 C
e Eulemur_rufus.k141_1620292                                29497 0 +     46535 C
e Eulemur_rubriventer.k141_411740                           14763 0 +     26808 C
e Eulemur_mongoz.k141_825972                                12307 0 +     27497 C
e Eulemur_macaco.k141_1341545                               12030 0 +     16540 C
e Eulemur_fulvus.k141_653297                                 7656 0 +    109717 C
e Eulemur_flavifrons.k141_903901                             4168 0 +     60246 C
e Eulemur_coronatus.k141_3240342                             7851 0 +     36558 C
e Eulemur_collaris.k141_311830                               1381 0 -      6809 C
e Eulemur_albifrons.k141_715837                              1444 0 +     13586 C
e Ellobius_talpinus.LOJH01090055.1                           2652 0 -      7838 C
e Ellobius_lutescens.LOEQ01003611.1                        235642 0 -    369425 C
e Dolichotis_patagonum.DolPat_scaffold_14102                33375 0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             56104 16 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                14631 16 +     26546 I
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 26891 0 -     67205 C
e Ctenodactylus_gundi.CteGun_scaffold_447                  204707 0 -    956709 C
e Cricetulus_griseus.LT883672.1                          53025429 0 +  72327488 C
e Cricetomys_gambianus.CriGam_scaffold_949                 273988 0 -    399297 C
e Chinchilla_lanigera.JH721867.1                         15957880 0 +  43084221 C
e Cephalopachus_bancanus.k141_702587                         4520 0 +     21754 C
e Cavia_tschudii.CavTsc_scaffold_488                       173989 0 +    436027 C
e Cavia_porcellus.DS562889.1                             15795798 0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15783848 16 -  24422027 I
e Castor_canadensis.CasCan_scaffold_47037                   27015 0 +     33760 C
e Carlito_syrichta.NW_007248099.1                          305484 0 +    345090 C
e Capromys_pilorides.CapPil_scaffold_647363                   730 0 +      1887 C
e Acomys_cahirinus.AcoCah_scaffold_1625                    108550 0 -    189883 C
e Nomascus_siki_b.tarseq_80                             20456 0 -  18771707 C
e Nomascus_annamensis.k141_745421                             374 0 -      4569 C
e Nomascus_gabriellae.k141_1350167                            785 0 +      9928 C

a score=0.000000
s hg38.chr4_GL000008v2_random                                8171 23 +    209709 tt----T-T-T-GTCC-T---GA----------G-A-A----G-T-T-TA-TT----G
s Acinonyx_jubatus.LLWD01000356.1                         2030269 21 +   3721120 -t----t-t-t-gtcc-t---GA----------G-A-A---GC-T-T-C---C----T
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    108550 22 -    189883 -A----T-TTT-GTCC-T---A-----------G-A-AA---A-T-T-G-A-T----T
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10653602 21 +  23371972 -T----T-T-T-GGCC-T---GA----------G-A-AA---C-T-T-T---G----T
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7090104 21 -  16596857 -T----T-T-T-GGCC-T---GA----------G-A-AA---C-T-T-C---G----T
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                    8840 17 -     22067 ------------GTCC-T---GG----------G-A-A---GT-T-T-T---G----A
i Allactaga_bullata.AllBul_scaffold_70162               I 2 C 0
s Allenopithecus_nigroviridis.k141_3103707                  59193 24 +     61638 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        51001 24 +     53391 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-A-T-TG-TT----G
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         1725 24 +     72529 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-A-T-TG-TT----G
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          1301 24 +      3797 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-A-T-TG-TT----G
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             6395 24 -     18050 TT----T-T-T-GTTC-T---GA----------G-A-A---GA-T-T-TG-TT----G
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  7512 24 -     11521 TT----T-T-T-GTTC-T---GA----------G-A-A---GA-T-T-TG-TT----G
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              7070 24 -     21359 TT----T-T-T-GTTC-T---GA----------G-A-A---GA-T-T-TG-TT----G
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1856473                                5453 24 +      7227 TT----T-T-T-GTTC-T---GA----------G-A-A---GA-T-T-TG-TT----G
i Alouatta_juara.k141_1856473                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          6368 24 -     10438 TT----T-T-T-GTTC-T---GA----------G-A-A---GA-T-T-TG-TT----G
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            3022 24 +      7047 TT----T-T-T-GTTC-T---GA----------G-A-A---GA-T-T-TG-TT----G
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             6306 24 +     10410 TT----T-T-T-GTTC-T---GA----------G-A-A---GA-T-T-TG-TT----G
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_390786                             7583 24 -      7615 TT----T-T-T-GTTC-T---GA----------G-A-A---GA-T-T-TG-TT----G
i Alouatta_puruensis.k141_390786                        C 0 N 0
s Alouatta_seniculus.k141_990213                             3027 24 +      6429 TT----T-T-T-GTTC-T---GA----------G-A-A---GA-T-T-TG-TT----G
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3516767 22 +   4113121 -T----T-T-C-ATCA-T---GA----------A-A-AA---T-C-T-G---TT---T
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      387229 11 -    631301 -T----T-T-T--TCT-T---AA----------A------------------------
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 I 7
s Antilocapra_americana.AntAmePen_scaffold_42841            27673 21 +     33004 -T----T-T-C-ATTC-T---GA----------G-A-AA---T-C-T-T---T----T
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 58701 24 +     78111 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            1632 24 +     22701 CT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5745592 24 +   9889416 tt----t-t-t-gttc-t---ga----------G-A-A---GC-T-T-TG-TT----G
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             2184 24 -    104377 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               2184 24 +     23246 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Aotus_vociferans.k141_718647                          C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      14484 19 +     17483 ------------GTCC-T---AT----------C-A-A---GC-T-T-CT-TC----A
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 5325 21 -     29036 -T----T-T-T--TCTTT---AA----------A-A-AA---A-G-T-T---T----T
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9535445 24 +  39197703 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             56733 24 +     85812 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 7730 24 +     89302 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             12239 24 -     58268 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             60227 24 +    119057 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               2178 15 -     25888 TT----T-T-T-GTTC-T---GA----------G-A-A--------------------
i Ateles_paniscus.k141_1631200                          C 0 I 8
s Avahi_laniger.k141_2840928                                 3037 24 -     16375 TT----T-T-T-GTCC-T---GA----------C-A-T---GC-T-T-CT-TT----G
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_767228                               9009 24 -      9688 TT----T-T-T-GTCC-T---GA----------C-A-T---GC-T-T-CT-TT----G
i Avahi_peyrierasi.k141_767228                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26376972 18 +  51448160 -T----T-C-C-GTCC-T---Ga----------g-a-a--aca-t-------------
i Balaenoptera_acutorostrata.KI537095.1                 C 0 I 3
s Balaenoptera_bonaerensis.DF502048.1                        2203 18 -     13118 -T----T-C-C-GTCC-T---Ga----------g-a-a--aca-t-------------
i Balaenoptera_bonaerensis.DF502048.1                   C 0 I 3
s Beatragus_hunteri.BeaHun_scaffold_21644                   39867 22 -     72089 -T----T-T-C-ATCC-T---GA----------G-A-AA---T-C-T-T---TT---T
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6556289 22 +   6870073 -T----t-t-c-atcc-t---ga----------g-a-a---at-c-t-t---t---tt
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138136520 22 - 161108492 -T----t-t-c-atcc-t---ga----------g-a-a---at-c-t-t---t---tt
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     568898 22 -    998990 -T----t-t-c-atcc-t---ga----------g-a-a---at-c-t-t---t---tt
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136292253 22 - 158972876 -T----t-t-c-atcc-t---ga----------g-a-a---at-c-t-t---t---tt
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1227874 22 -   1914593 -T----t-t-c-atcc-t---ga----------g-a-a---at-c-t-t---t---tt
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               110102 24 -    171031 TT----T-T-T-GTTC-T---GA----------G-A-A---GA-T-T-TG-TT----G
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                  9128 24 +    125063 TT----T-T-T-GTTC-T---GA----------G-A-A---GA-T-T-TG-TT----G
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                11176 24 -    216513 TT----T-T-T-GTTC-T---GA----------G-A-A---GA-T-T-TG-TT----G
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        3715 24 -    134917 TT----T-T-T-GTTC-T---GA----------G-A-A---GA-T-T-TG-TT----G
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3216007 21 -   8989139 -T----T-C-T-GTCC-T---GA----------G-A-AA---C-G-C-C---T----T
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           394194 21 -  15254737 -T----T-C-T-GTCC-T---GA----------G-A-AA---C-G-C-C---T----T
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2969928 21 +   6889770 -T----T-C-T-GTCC-T---GA----------G-A-AA---C-G-C-C---T----T
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11514990 21 +  39901454 -T----T-T-T-GTCC-T---GA----------G-A-AA---A-T-T-C---T----T
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   10007 21 +     87036 -T----T-T-T-GTCC-T---GA----------G-A-AA---A-T-T-C---T----T
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11261649 21 -  35597290 -T----T-T-T-GTCC-T---GA----------g-a-a---aa-t-t-c---t----t
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11084178 21 +  39895921 -T----T-T-T-GTCC-T---GA----------g-a-a---aa-t-t-c---t----t
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16451212 21 -  44759192 -T----T-T-T-GTCC-T---GA----------G-a-a---aa-t-t-c---t----t
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21321874 22 + 157394656 -T----T-T-C-atcc-t---ga----------a-a-a---at-c-t-g---t---tt
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135703101 22 - 157403528 -T----T-T-C-ATCC-T---GA----------A-A-AA---T-C-T-G---TT---T
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_647363                   730 21 +      1887 -A----T-A-T-GTCT-T---GA----------T-A-A---GT-T-T-T---T----G
i Capromys_pilorides.CapPil_scaffold_647363             C 0 C 0
s Carlito_syrichta.NW_007248099.1                          305484 16 +    345090 -----------------T---GA----------G-A-AA---A-T-T-TGTCG----G
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               56406 21 +     67245 -T----T-T-T--TCTTT---AA----------A-A-AA---A-A-T-C---T----T
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   155723 18 -    276539 -T----T-T-T-GTCC-A---GA----------G-A-AA---C-T-T-----------
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18886913 24 -  29618158 TT----T-T-T-GTCC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 4459 24 -     26817 TT----T-T-T-GTCC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                 8699 24 +     25043 TT----T-T-T-GTCC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         4520 16 +     21754 -----------------T---GA----------G-A-AA---A-T-T-TGCAG----G
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4359535 21 +   7569818 -t----t-t-t-gtcC-T---GA----------A-A-AA---C-T-T-C---T----T
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_305802         1177 21 +      1857 -T----T-T-T-GTCC-T---GA----------A-A-AA---C-T-T-C---T----T
i Ceratotherium_simum_cottoni.CerCot_scaffold_305802    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6550989 24 +   6739814 tt----t-t-t-gttc-t---ga----------g-A-A---GC-T-T-TG-TT----G
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      52466 24 -     54931 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         17450 24 -     19697 tt----t-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         54981 24 -    107033 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        1424 24 -      3853 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          25356 24 +     30494 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           1379 24 -      4022 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          1271 24 -      3505 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Cercopithecus_hamlyni.k141_381099                     I 2 C 0
s Cercopithecus_lowei.k141_623764                           20080 24 +     35983 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11985856 24 +  12117833 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46473352 24 +  46592721 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      31179 24 +     33420 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        1215 24 -      3443 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      2206 24 -      4669 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        2010 24 -      4411 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         1530 24 -      4205 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           55373 24 -     68416 TT----T-G-T-GTCC-T---GA----------G-A-T---GC-T-T-CT-TT----G
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            4423 24 +     13308 TT----T-G-T-GTCC-T---GA----------G-A-T---GC-T-T-CT-TT----G
i Cheirogaleus_medius.k141_133808                       C 0 I 6
s Cheracebus_lucifer.k141_619653                             1712 24 -     18223 TT----T-T-T-GTTC-T---GA----------G-A-A---GA-T-T-TG-TT----G
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             18735 24 +     25473 TT----T-T-T-GTTC-T---GA----------G-A-A---GA-T-T-TG-TT----G
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           37774 24 +     57117 TT----T-T-T-GTTC-T---GA----------G-A-A---GA-T-T-TG-TT----G
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          42449 24 +     54541 TT----T-T-T-GTTC-T---AA----------G-A-A---GA-T-T-TG-TT----G
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15957880 22 +  43084221 -T---GT-A-T-GTCT-T---GA----------G-A-AA---T-G-T-T---T----T
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         67323 24 +    196370 TT----T-T-T-GTTC-T---GA----------G-A-A---GA-T-T-TG-TT----G
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          11497 24 +     40510 TT----T-T-T-GTTC-T---GA----------G-A-A---GA-T-T-TG-TT----G
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15134810 24 -  15256731 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-A-T-TG-TT----G
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      29856 24 -     53260 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-A-T-TG-TT----G
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101140304 24 + 101219884 tt----t-t-t-gttc-t---ga----------g-A-A---GC-A-T-TG-TT----G
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                13406 24 -     21363 -T----A-T-T-CTCC-A---GA----------G-A-AATTTA-T-T-T---T----G
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 I 4
s Choloepus_hoffmanni.KN194586.1                           758712 24 +    964067 -t----g-t-t-ctcc-a---ga----------g-a-aattta-T-T-T---T----G
i Choloepus_hoffmanni.KN194586.1                        C 0 I 4
s Chrysochloris_asiatica.ChrAsi_scaffold_141308              5491 21 -     12508 -T----T-T-T-GTCC-T---GA----------A-A-A---CC-T-T-T---T----G
i Chrysochloris_asiatica.ChrAsi_scaffold_141308         C 0 I 4
s Colobus_angolensis.KN985967.1                          10878886 24 +  10971483 tt----t-t-t-gttc-t---ga----------G-A-A---GC-T-T-TG-TT----G
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147660045 24 + 156195979 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            12030 24 +     23629 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60609688 14 +  78930452 -C----T-T-T-GTTC-T---GA----------G-A-A--------------------
i Condylura_cristata.JH655880.1                         C 0 I 7
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         35793 21 -     40477 -T----T-T-T-GTAC-T---GA----------G-G-AA---CCT-C-T---T-----
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 273988 23 -    399297 -C----T-GTT-GTGT-T---AG----------G-A-AA---T-T-T-T-A-T----T
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             15618 19 -     19186 -T----T-C-T-ATTC-TGCAAA--------ACA-A-A--------------------
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 I 2
s Cryptoprocta_ferox.CryFer_flattened_line_19014            48299 21 -     70449 -T----T-T-T-GTCC-T---GA----------G-A-AA---C-T-T-C---T----T
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 I 4
s Ctenodactylus_gundi.CteGun_scaffold_447                  204707 21 -    956709 -T----T-G-T-GTCC-T---GG----------G-A-AA---T-T-T-C---T----T
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 26891 21 -     67205 -G----T-A-G-GTCT-T---GA----------T-A-AA---T-T-T-T---T----G
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          178584 24 -   6883506 -T----C-T-T-GTCC-A---CA----------G-A-AATTTC-T-T-T---T----A
i Dasypus_novemcinctus.JH568778.1                       C 0 I 4
s Daubentonia_madagascariensis.ctg11                     16841247 24 +  31942871 TT----T-T-A-ATCC-T---GA----------G-A-A---GC-T-T-CT-TG----G
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80033711 18 -  96802777 -T----T-C-C-GTCC-T---GA----------G-A-AA--CA-T-------------
i Delphinapterus_leucas.KZ290064.1                      C 0 I 3
s Desmodus_rotundus.KZ672188.1                           18695714 20 -  18957592 -t----t-t-t--tct-t---aa----------a-a-a---at-g-t-c---t----t
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 318843 21 +    993696 -T----T-T-T-GTCC-T---GA----------A-A-AA---C-T-T-C---T----T
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_24487                 60998 21 +     62380 -T----T-T-T-GTCC-T---GA----------A-A-AA---C-T-T-C---T----T
i Diceros_bicornis.DicBicMic_scaffold_24487             C 0 C 0
s Echinops_telfairi.JH980316.1                           22990746 21 -  44670279 -T----T-T-T-GATA-T---GA----------G-A-AA---T-A-T-T---T----A
i Echinops_telfairi.JH980316.1                          C 0 I 4
s Eidolon_helvum.KE772537.1                                  9084 19 +     24177 -T----T-T-T-GTCC-T---GA----------G-A-AA---C-T-T-T---------
i Eidolon_helvum.KE772537.1                             C 0 I 2
s Elaphurus_davidianus.JRFZ01086400.1                     1488413 21 +   1727528 -T----T-T-C-ATCC-T---GA----------G-A-AA---T-C-G-T---T----T
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7803136 20 +  15467074 -T----C-T-T-CT-C-T---AT----------G-C-AA---C-A-T-T---T----G
i Elephantulus_edwardii.JH947210.1                      C 0 I 4
s Ellobius_lutescens.LOEQ01003611.1                        235642 15 -    369425 -----------------T---GG---------AG-G-AA---T-T-T-T-A-T----T
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           2652 15 -      7838 -----------------T---GG---------AG-G-AA---T-T-T-T-A-T----T
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85866911 21 +  99434291 -T----T-T-T-GGCT-T---GG----------G-A-AA---C-T-T-C---A----C
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Equus_asinus.JREZ01000137.1                             2952103 21 -   4388051 -T----T-T-C-GTCC-T---GA----------A-A-AA---C-T-T-C---T----T
i Equus_asinus.JREZ01000137.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13346114 21 +  41866177 -T----T-T-C-GTCC-T---GA----------A-A-AA---C-T-T-C---T----T
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                           8106 21 +     92910 -T----T-T-C-GTCC-T---GA----------A-A-AA---C-T-T-C---T----T
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erythrocebus_patas.Contig8                             48766989 24 -  48907691 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-A-T-TG-TT----G
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          311856 18 +    330699 -T----T-C-C-GTCC-T---GA----------G-A-A--GCA-T-------------
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 I 3
s Eubalaena_japonica.EubJap_flattened_line_7756             58285 18 +     89355 -T----T-C-C-GTCC-T---GA----------G-A-AA--CA-T-------------
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 I 3
s Eulemur_albifrons.k141_715837                              1444 24 +     13586 tt----T-T-T-GTCC-T---GA----------G-A-T---GC-T-T-CT-TT----G
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               1381 24 -      6809 tt----T-T-T-GTCC-T---GA----------G-A-T---GC-T-T-CT-TT----G
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             7851 24 +     36558 tt----T-T-T-GTCC-T---GA----------G-A-T---GC-T-T-CT-TT----G
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             4168 24 +     60246 tt----T-T-T-GTCC-T---GA----------G-A-T---GC-T-T-CT-TT----G
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 7656 24 +    109717 tt----T-T-T-GTCC-T---GA----------G-A-T---GC-T-T-CT-TT----G
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               12030 24 +     16540 tt----T-T-T-GTCC-T---GA----------G-A-T---GC-T-T-CT-TT----G
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                12307 24 +     27497 tt----T-T-T-GTCC-T---GA----------G-A-T---GC-T-T-CT-TT----G
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           14763 24 +     26808 tt----T-T-T-GTCC-T---GA----------G-A-T---GC-T-T-CT-TT----G
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                29497 24 +     46535 tt----T-T-T-GTCC-T---GA----------G-A-T---GC-T-T-CT-TT----G
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              12220 24 -     29447 tt----T-T-T-GTCC-T---GA----------G-A-T---GC-T-T-CT-TT----G
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129889249 21 - 159252932 -t----t-t-t-gtcc-t---GA----------G-A-A---GC-T-T-C---T----T
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129276323 21 - 158578461 -t----t-t-t-gtcc-t---GA----------G-A-A---GC-T-T-C---T----T
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 17458 21 +     52776 -T----T-T-T-GTCC-T---GA----------G-A-A---GC-T-T-C---T----T
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13889453 21 -  19261668 -t----t-g-t-gttt-t---ga----------g-a-a---gC-T-C-T---T----T
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               152701 23 +    324696 -T----T-T-T-GTCC-T---GA----------G-G-AA---C-T-T-CT-TT----G
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    177926 21 -    189561 -T----t-t-c-atcc-t---ga----------g-a-a---at-c-t-g---t----t
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                            9129 13 -     18683 ----------T-ATCT-T---GG----------A-A-AA---A---------------
i Glis_glis.GliGli_scaffold_79770                       I 1 I 4
s Gorilla_beringei.k141_111300                               1563 24 -     14630 TT----T-T-T-GTTC-T---GA----------G-A-A-T--G-T-T-TG-TT----G
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119648661 24 - 195582420 tt----t-t-t-gttc-t---ga----------G-A-A-T--G-T-T-TG-TT----G
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   73691 19 +    118900 ----------T-GTCC-T---GG----------A-GTAA---C-T-T-T---T----A
i Graphiurus_murinus.GraMur_scaffold_4493               I 6 C 0
s Hapalemur_alaotrensis.k141_1198205                         1991 24 +      3980 TT----T-T-T-GTCC-T---GA----------G-A-T---GC-T-T-CT-TT----G
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             24471 24 +     26611 TT----T-T-T-GTCC-T---GA----------G-A-T---GC-T-T-CT-TT----G
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             1925 24 +     56096 TT----T-T-T-GTCC-T---GA----------G-A-T---GC-T-T-CT-TT----G
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        25198 24 -     42470 TT----T-T-T-GTCC-T---GA----------G-A-T---GC-T-T-CT-TT----G
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        41795 24 -     54384 TT----T-T-T-GTCC-T---GA----------G-A-T---GC-T-T-CT-TT----G
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              13224 21 +     53719 -T----T-T-T-GTCC-T---GA----------G-A-AA---C-T-T-C---T----T
i Helogale_parvula.HelPar_flattened_line_22962          C 0 I 4
s Hemitragus_hylocrius.HemHyl_scaffold_16669                24280 21 -     91191 -T----T-A-C-ATG--T---GA----------A-A-AA---T-C-T-G---TT---T
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2547562 21 +  31725842 -t----t-g-t-gtgt-t---ga----------g-a-aA---C-T-T-T---T----G
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               52975 21 +     73687 -T----T-A-T-GTCC-T---GA----------G-A-AA---C-A-C-T---T----T
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 I 4
s Hippopotamus_amphibius.HipAmp_scaffold_1308              143980 22 +    277961 -T----T-C-C-ACCC-T---GA----------G-A-A-TT-T-T-T-T---T----T
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      275397 20 -    477199 -T----T-T-T-GTCC-T---CA----------G-A-AA---C-T-T-T---T-----
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              4552 20 -      9143 -T----T-T-T-GTCC-T---CA----------G-A-AA---C-T-T-T---T-----
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg649                                    98235 24 +    115816 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Hoolock_leuconedys.ctg649                                C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 12568 11 -     67322 -T----T-T-T-GTCC-T---GA-----------------------------------
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 I 9
s Hylobates_abbotti.k141_493872                              1372 24 +      5897 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_282275                                585 24 +      1846 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Hylobates_agilis.k141_282275                          C 0 C 0
s Hylobates_klossii.k141_466549                              7830 24 +     11537 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_muelleri.k141_1133650                             807 24 -      2775 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             29428  5 -     60944 ------------------------------------------------TG-TT----G
i Hylobates_pileatus_a.tarseq_592                         N 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     2547 21 +     22540 -T----T-G-T-GTCT-T---GA----------G-A-AA---C-A-T-T---T----T
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7122233 16 +  13083262 -------------gcc-t---gg----------A-A-AA---C-A-T-T---T----T
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_3334527                                   8435 24 +      9207 TT----T-T-T-GTCC-T---GA----------G-A-T---GC-T-T-CT-TT----G
i Indri_indri.k141_3334527                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               5638 18 +     17520 -T----T-C-C-ATCC-T---GA----------G-A-AA--CA-T-------------
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 I 3
s Jaculus_jaculus.JH725517.1                              8561802 17 +  11848649 ------------GTGC-T---GG----------G-A-AA---T-T-T-T---G----A
i Jaculus_jaculus.JH725517.1                            I 2 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               20470 18 +     37189 -T----T-C-C-GTCC-T---GA----------G-A-AA--CA-T-------------
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 I 3
s Lagothrix_lagothricha.k141_12968                          46288 24 -    147782 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   110589 21 -    115756 -C----T-T-T-GTCC-T---AA----------G-A-AA---C-T-T-C---T----T
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258403474 24 - 285822530 TT----T-T-T-GTCC-T---GA----------G-A-T---GC-T-T-CT-TT----G
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        20368 24 +     39228 TT----T-T-T-GTCC-T---GA----------G-A-T---GC-T-T-CT-TT----G
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            49744 24 +     63517 TT----T-T-T-GTCC-T---GA----------G-A-T---GT-T-T-CT-GT----G
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        74964 24 +    116806 TT----T-T-T-GTCC-T---GA----------G-A-T---GC-T-T-CT-TT----A
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     28005 24 -     33031 TT----T-T-T-GTCC-T---GA----------G-A-T---GC-T-T-CT-GT----G
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3082270 21 -   3498232 -T----T-T-T-GACC-T---GA----------G-A-A---CC-T-T-C---G----T
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lipotes_vexillifer.KE558548.1                            132817 18 +   3060487 -T----T-C-C-ATCC-T---GA----------G-A-AA--CA-T-------------
i Lipotes_vexillifer.KE558548.1                         C 0 I 3
s Lophocebus_aterrimus.ctg55                             19244075 24 +  19376315 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            6988 19 +     84689 ------------GTCC-T---TT----------C-A-A---gc-t-t-ct-tt----g
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3774746 19 +   6799190 ------------GTCC-T---TT----------C-A-a---gc-t-t-ct-tt----g
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20587550 21 -  62548349 -T----T-G-T-GTCC-T---GA----------G-A-AA---C-A-T-T---G----T
i Loxodonta_africana.GL010040.1                         C 0 I 4
s Lycaon_pictus.CM007556.1                               11083634 21 +  39895028 -T----T-T-T-GTCC-T---GA----------g-a-a---aa-t-t-c---t----t
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             15761 24 +     74745 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12702267 24 +  12821369 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               4360 24 +      6569 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           42660 24 +     63263 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_1068107                               11237 24 +     12679 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                 810 24 +      3017 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  42422 24 -     79256 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196031342 24 + 196197964 tt----t-t-t-gttc-t---ga----------g-A-A---GC-T-T-TG-TT----G
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11441446 24 +  11645122 tt----t-t-t-gttc-t---ga----------g-A-A---GC-T-T-TG-TT----G
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   1372 24 -     46448 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                1199 24 -      3617 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 11532 24 -     55006 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43836571 24 +  43892939 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                3794 24 -      5978 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               1374 24 -     27140 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43433235 24 -  43563597 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4446061 24 -   4543643 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            142883 21 +    252755 -T----T-T-T-GTAC-T---GA----------G-A-AA---C-T-T-C---T----T
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             32948 21 +     58827 -T----T-T-T-GTAC-T---GA----------G-A-AA---C-T-T-C---T----T
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36870080 16 +  64221397 -------------gcc-t---aG----------A-A-AA---C-A-T-T---T----T
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       61375 20 -    234502 ------T-T-T-GTCC-T---GA----------G-A-A---CC-T-CGT---G-----
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_1828            224468 21 -    226874 -T----T-T-T-GGCA-T---GG----------G-A-AA---C-T-T-C---T----T
i Mellivora_capensis.MelCap_flattened_line_1828         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233                8013 19 +     15977 ----------T-GTCA-T---AG----------G-A-AA---A-T-T-T-A-T----T
i Meriones_unguiculatus.MerUng_scaffold_52233           I 3 C 0
s Mesocricetus_auratus.KB708139.1                         1042938 15 -  26018355 -----------------T---AG---------AA-G-AA---T-T-C-T-A-T----T
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_183284                    509 18 +      2166 -T----T-C-C-ATCC-T---GA----------G-A-AA--CA-T-------------
i Mesoplodon_bidens.MesBid_scaffold_183284              C 0 I 3
s Microcebus_murinus.CM007691.1                          16506589 24 +  47401472 tt----t-t-t-gtcc-t---ga----------G-A-T---GC-T-T-CT-TT----G
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  27695 21 -     48017 -T----T-T-T-GATA-T---TA----------G-A-AA---T-A-T-T---T----G
i Microgale_talazaci.MicTal_scaffold_34660              C 0 I 4
s Micronycteris_hirsuta.MicHir_scaffold_37978               19563 20 -     32043 -T----T-T-T--TCT-T---AA----------A-A-AA---C-A-T-C---T----T
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22815303 15 -  98408828 -----------------T---GG---------AG-G-AA---T-T-T-T-A-T----C
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8206302 21 +  10048721 -A----T-T-T-GTCC-C---AA----------G-A-AA---G-G-T-C---T----C
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            30979 21 +     45743 -A----T-T-T-GTCC-C---AA----------G-A-AA---G-G-T-C---T----C
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        31909 24 +     34273 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         7568 21 -    104932 -T----T-T-T-GACC-T---GA----------G-A-AA---C-T-T-C---G----T
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     2003 24 +      8497 TT----T-T-T-GTCC-T---GA----------G-A-T---GC-T-T-CT-TT----G
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 143236 18 +    154973 -T----T-C-C-GTCC-T---GA----------G-A-AA--CA-T-------------
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 I 3
s Mormoops_blainvillei.MorMeg_scaffold_2952                157883 21 +    265003 -T----T-T-T-GTCC-T---AA----------A-A-AA---C-A-T-C---T----T
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 1510 22 -      4346 -T----T-T-C-ATCC-T---GA----------G-A-AA---T-C-T-T---TT---T
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  140919 22 -    168139 -T----T-T-T-GTCC-T---AA----------G-A-AA---C-T-T-T-A-A----T
i Mungos_mungo.MunMun_flattened_line_8729               C 0 I 4
s Murina_feae.MurFea_scaffold_2254                          16100 21 -    100666 -T----T-T-T-GTCC-T---AA----------G-A-AA---C-T-T-G---T----T
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70761475 23 +  92629107 -C----C-TTT-GACC-T---AA----------G-A-AA---T-T-T-T-A-T----T
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75484550 23 +  98207768 -C----C-TTT-GTCC-T---AA----------G-A-AA---T-T-T-T-A-T----T
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67549089 24 +  89017189 -C----C-TTT-GTcc-t---aa----------a-a-a---at-ttt-t-a-t----t
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74324188 23 +  97876770 -C----C-TTT-GTCC-T---AA----------G-A-AA---T-T-T-T-A-T----T
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              7008 18 +     98495 ----------T-GTCC-T---GG----------A-A-AA---C-T-T-T---T----G
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 2 C 0
s Mustela_putorius.JH417978.1                             4419321 21 -  28371801 -T----T-T-T-GGCT-T---GG----------G-A-AA---C-T-T-C---A----T
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     86472 21 -    117718 -A----T-A-T-GTCA-T---GC----------C-A-A---GT-T-T-T---T----G
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               964428 21 +   8389877 -T----T-T-T-GTCC-T---AA----------G-A-AA---C-T-T-C---T----T
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5016105 21 +   6462685 -T----T-T-T-GTCC-T---AA----------G-A-AA---C-T-T-C---T----T
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3462014 21 -   3747815 -T----T-T-T-GTCC-T---AA----------G-A-AA---C-T-T-C---T----T
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         7211 21 +     66751 -T----T-T-T-GTCC-T---AA----------G-A-AA---C-T-T-C---T----T
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             1965 24 -      8794 -T----C-T-T-TTCC-A---GA----------G-A-AATTTC-T-T-T---T----A
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 I 4
s Nannospalax_galili.KL201303.1                            107270 23 +    362372 -C----T-TTT-GTAC-T---GG----------G-A-AA---C-A-T-T-A-T----G
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               4274 24 +     48152 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4481169 21 -  14209539 -T----T-T-T-GGCC-T---GA----------G-A-AA---C-T-T-C---G----T
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3947845 18 -   4490290 -T----T-C-C-GTCC-T---GA----------G-A-AA--CA-T-------------
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 I 3
s Noctilio_leporinus.NocLep_scaffold_12062                  46216 21 +     94413 -T----T-T-T-GTCC-T---AA----------A-A-GA---C-T-T-C---T----T
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_745421                             374  8 -      4569 ------------gtaa-t---ca----------t------------------------
i Nomascus_annamensis.k141_745421                       C 0 I 765
s Nomascus_gabriellae.k141_1350167                            785  8 +      9928 ------------gtaa-t---ca----------t------------------------
i Nomascus_gabriellae.k141_1350167                      C 0 I 670
s Nomascus_siki_b.tarseq_80                             20456 18 -  18771707 ------------ttta-t---gaagccagcatcg------------------------
i Nomascus_siki_b.tarseq_80                         C 0 I 697
s Nyctereutes_procyonoides.CAJHUB010000786.1                26630 21 +   3668941 -T----T-T-T-GTCC-T---Ga----------g-a-a---aa-t-t-c---t----t
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65563334 19 -  95554990 ------------GTCC-T---TT----------C-A-A-T--C-T-T-CT-TT----G
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                             179 19 +      6470 ------------GTCC-T---TT----------C-A-A-T--C-T-T-CT-TT----G
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65665701 19 +  89412551 ------------GTCC-T---TT----------C-A-A-T--C-t-t-ct-tt----g
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Octodon_degus.JH651621.1                                3675022 21 +  10294119 -g----t-g-t-gtct-t---gA----------T-G-A-T--T-T-T-T---T----G
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             675853 16 -   3126709 -T----T-T-T-GACC-T---GA----------G-A-AA---C---------------
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1076636 21 +   1425656 -T----T-T-C-ATCT-T---GA----------G-A-AA---T-C-T-T---T----T
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         33798 21 +     78940 -T----T-T-C-ATCC-T---GA----------G-A-AA---T-G-T-G---T----T
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  121126  9 +    145789 -------------------------------------AA---T-T-T-T-A-T----T
i Ondatra_zibethicus.OndZib_scaffold_6821               I 5 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  33056 15 +     62360 -----------------C---AG---------AA-G-AA---T-T-T-T-A-T----T
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7221529 18 -   7562323 -T----T-C-C-ATCC-T---GA----------G-A-AA--CA-T-------------
i Orcinus_orca.KB316965.1                               C 0 I 3
s Orycteropus_afer.OryAfe_flattened_line_13509              39763 21 -     66828 -T----T-T-T-GTCC-T---GA----------G-A-AA---C-T-T-T---T----G
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 I 4
s Otocyon_megalotis.JAEUCK010005121.1                      303965 21 -    505867 -T----T-T-T-GTCC-T---GA----------g-a-a---aa-t-t-c---t----t
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Ovis_aries.CM001582.2                                 134074081 22 - 275406953 -T----T-A-C-Atcc-t---ga----------a-a-a---at-c-t-g---t---tt
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      75295 22 +    140051 -T----T-A-C-ATCC-T---GA----------A-A-AA---T-C-T-G---TT---T
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127570905 24 - 205426864 tt----t-t-t-gttc-t---gA----------G-A-A---GG-T-T-TG-TT----G
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120148052 24 - 196562556 tt----t-t-t-gttc-t---gA----------G-A-A---GG-T-T-TG-TT----G
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  30412 21 +    295523 -T----T-T-T-GTCC-T---GA----------A-A-A---GC-T-T-C---T----T
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3634016 21 +  18214204 -t----t-t-t-gtcc-t---GA----------A-A-A---GC-T-T-C---T----T
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5023793 21 -   6340057 -t----t-t-t-gtcc-t---GA----------A-A-A---GC-T-T-C---T----T
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1062796 22 -   1292953 -T----T-T-C-Atcc-t---ga----------a-a-a---at-c-t-g---t---tt
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188152020 24 - 188283584 tt----t-t-t-gttc-t---ga----------G-A-A---GC-T-T-TG-TT----G
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            48232 24 +     76494 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47509416 24 +  47705337 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 63399 24 -    104429 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  13183 24 -     29451 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                33588 24 +     35859 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    111743 21 -    135482 -T----T-G-T-GTCC-T---GA----------G-A-AA---C-T-T-C---T----T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           1329 19 -     23713 ------------GTCC-T---AT----------C-A-A---GC-t-t-ct-tt----g
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            20626 19 -     27972 ------------GTCC-T---AT----------C-A-A---GC-T-t-ct-tt----g
i Perodicticus_potto.k141_713187                        C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4946225 15 -   8017169 -----------------C---AG---------AA-G-AA---T-T-T-T-A-T----T
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            118146 18 -    122454 -T----T-C-C-GTCC-T---GA----------G-A-AA--CA-T-------------
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 I 3
s Piliocolobus_badius.k141_1497351                           1275 24 -      3310 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       21181 24 -     82327 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           17932 24 +     19957 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26735941 24 +  26888534 tt----t-t-t-gttc-t---ga----------G-A-A---GC-T-T-TG-TT----G
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            93205 21 +    112873 -T----T-T-T-GTCC-T---AA----------G-A-AA---C-T-T-G---T----T
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             39815 24 -     61926 TT----T-T-T-GTTC-T---GA----------G-A-A---GA-T-T-TG-TT----G
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        21244 24 +     78826 TT----T-T-T-GTTC-T---GA----------G-A-A---GA-T-T-TG-TT----G
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              5195 24 -     15800 TT----T-T-T-GTTC-T---GA----------G-A-A---GA-T-T-TG-TT----G
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                         8393 24 -     16101 TT----T-T-T-GTTC-T---GA----------G-A-A---GA-T-T-TG-TT----G
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          1702 24 +      9673 TT----T-T-T-GTTC-T---GA----------G-A-A---GA-T-T-TG-TT----G
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13470696 24 -  19735023 TT----T-T-T-GTTC-T---GA----------G-A-A---GA-T-T-TG-TT----G
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                            9604 24 -     31692 TT----T-T-T-GTTC-T---GA----------G-A-A---GA-T-T-TG-TT----G
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           2213 18 +     21690 -T----T-C-C-ACCC-T---GA----------G-A-AA--CA-T-------------
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 I 3
s Plecturocebus_bernhardi.k141_959214                       18968 24 +     44506 TT----T-T-T-GTTC-T---GA----------G-A-A---GA-T-T-TG-TT----G
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        19186 24 +     67491 TT----T-T-T-GTTC-T---GA----------G-A-A---GA-T-T-TG-TT----G
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                       9431 24 -     98129 TT----T-T-T-GTTC-T---GA----------G-A-A---GA-T-T-TG-TT----G
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     19031 24 +    147771 TT----T-T-T-GTTC-T---GA----------G-A-A---GA-T-T-TG-TT----G
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        19282 24 -     23762 TT----T-T-T-GTTC-T---GA----------G-A-A---GA-T-T-TG-TT----G
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_2078842                         19230 24 -     19696 TT----T-T-T-GTTC-T---GA----------G-A-A---GA-T-T-TG-TT----G
i Plecturocebus_dubius.k141_2078842                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         19104 24 +    152463 TT----T-T-T-GTTC-T---GA----------G-A-A---GA-T-T-TG-TT----G
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      5861 24 +      8943 TT----T-T-T-GTTC-T---GA----------G-A-A---GA-T-T-TG-TT----G
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                          8821 24 +    134592 TT----T-T-T-GTTC-T---GA----------G-A-A---GA-T-T-TG-TT----G
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          19414 24 -     75465 TT----T-T-T-GTTC-T---GA----------G-A-A---GA-T-T-TG-TT----G
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              183458 24 -    373494 tt----t-t-t-gttc-t---ga----------G-A-AA---C-T-T-TG-TT----G
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19803362 24 +  19899266 TT----T-T-T-GTTC-T---GA----------G-A-AA---C-T-T-TG-TT----G
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               1511 24 -     15069 TT----T-T-C-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              1645 24 +     14865 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                72839 21 +     78963 -T----T-A-T-GTCC-T---GA----------G-A-AA---C-A-C-T---T----T
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 I 4
s Prolemur_simus.MPIZ01000048.1                           6844847 24 +  12164890 TT----T-T-T-GTCC-T---GA----------G-A-T---GC-T-T-CT-TT----G
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     13282 24 -     30946 tt----t-t-t-gtcc-t---ga----------G-A-T---GC-T-T-CT-TT----G
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_diadema.k141_577245                           39317 24 +     52369 TT----T-T-T-GTCC-T---GA----------G-A-T---GC-T-T-CT-TT----G
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         31706 24 -     44753 TT----T-T-T-GTCC-T---GA----------G-A-T---GC-T-T-CT-TT----G
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            13628 24 +     27322 TT----T-T-T-GTCC-T---GA----------G-A-T---GC-T-T-CT-TT----G
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       13272 24 -     53241 TT----T-T-T-GTCC-T---GA----------G-A-T---GC-T-T-CT-TT----G
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         35543 24 -     48185 TT----T-T-T-GTCC-T---GA----------G-A-T---GC-T-T-CT-TT----G
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           29074 19 +     77221 ----------T-GTCG-T---AG----------G-A-AA---A-T-T-T-A-T----T
i Psammomys_obesus.NESX01026517.1                       I 3 C 0
s Pteronotus_parnellii.KE867983.1                             773 21 -     27784 -t----t-t-t-gtcc-t---aa----------a-a-a---at-g-t-c---t----t
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        241178 22 -    344369 -T----TTT-T-GGCT-T---GG----------G-A-AA---C-T-T-C---A----T
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13242877 19 -  17261082 -T----T-T-T-GTCT-T---GA----------G-A-AA---C-T-T-T---------
i Pteropus_alecto.KB031157.1                            C 0 I 2
s Pteropus_vampyrus.KN525959.1                             600831 19 -   3946241 -T----T-T-T-GTCT-T---GA----------G-A-AA---C-T-T-T---------
i Pteropus_vampyrus.KN525959.1                          C 0 I 2
s Puma_concolor.QAVW01000427.1                          131530609 21 - 161321710 -t----t-t-t-gtcc-t---GA----------G-A-A---GC-T-T-C---C----T
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             25636 24 +     56732 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6802126 24 +   6970761 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             1518 24 +     18040 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                12722 21 +     68503 -T----T-T-C-ATCC-T---GA----------G-A-AA---T-C-T-T---T----T
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13911015 23 +  90463843 -C----C-TTT-GTCC-T---GA----------G-A-AA---T-T-T-T-A-T----T
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1784479 21 +   2252614 -t----t-t-t-gtct-t---cA----------A-A-AA---C-T-T-C---T----G
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           12073 24 -     14454 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206373399 24 - 206558726 tt----t-t-t-gttc-t---ga----------G-A-A---GC-T-T-TG-TT----G
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44851047 24 -  45163003 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                16180 19 +    109198 -T----T-T-T-GTCC-T---GA----------G-A-AA---C-T-T-T---------
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 I 2
s Saiga_tatarica.SaiTat_scaffold_82192                       4368 22 +     12214 -T----T-T-C-ATCC-T---GA----------G-A-AA---T-C-T-T---TT---T
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15668839 24 -  43202129 tt----t-t-t-gttc-t---GA----------G-A-A---GC-T-T-TG-TT----G
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                         714 24 +     34089 TT----T-T-T-GTTC-T---GA----------G-A-A---GT-T-T-TG-TT----G
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                               645 24 -     60842 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                               714 24 +     67014 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                               714 24 +     60816 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                  642 24 -     76454 TT----T-T-T-GTTC-T---GA----------G-A-G---GC-T-T-TG-TT----G
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17337222 24 -  30362882 TT----T-T-T-GTTC-T---GA----------G-A-A---GT-T-T-TG-TT----G
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         16823 24 -     62485 TT----T-T-T-GTTC-T---GA----------G-A-A---GT-T-T-TG-TT----G
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   28269 14 -    114521 -C----T-T-T-GTTC-G---GA----------G-A-A--------------------
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 I 7
s Semnopithecus_entellus.k141_1527475                       24061 24 +     26421 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       4523 24 +     20762 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         38256 24 +     40653 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                            8815 24 -     12194 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     22234 24 -     27512 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         31255 24 -     33692 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   94308 15 -    120886 -----------------T---AA---------AA-T-AA---T-T-T-T-A-T----T
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            14495 14 +    739146 -T----T-T-T-GTTC-T---AA----------A-A-A--------------------
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 I 2
s Spermophilus_dauricus.KZ294190.1                        2236159 16 +   2842873 -------------gcc-t---gg----------A-A-AA---C-A-T-T---T----T
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             230895 21 -    276980 -T----T-T-T-GGCC-T---GA----------G-A-AA---C-T-T-C---A----T
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Sus_scrofa.CM000824.4                                 189268785 17 + 218635234 ------T-T-T-GTCC-T---GA----------G-A-AA---C-T-T-----------
i Sus_scrofa.CM000824.4                                 C 0 I 1
s Symphalangus_syndactylus.tarseq_24                        11173 24 -  13920577 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Symphalangus_syndactylus.tarseq_24                    I 10 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               2701 21 -      6213 -T----T-T-T-GTCC-T---GA----------G-A-AA---C-T-T-C---T----T
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               11643 24 +     45698 -T----C-T-T-TTCC-A---GA----------G-A-AATTTC-T-T-T---T----G
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 I 4
s Tapirus_indicus.TapInd_scaffold_176                      803640 21 +   1148477 -T----T-T-T-GTCC-T---GA----------G-A-AA---C-T-T-C---T----C
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  54299 21 +     99546 -T----T-T-T-GTCC-T---GA----------G-A-AA---C-T-T-C---T----C
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               22973 15 +     42269 -----------------T---GA----------G-A-AA---A-T-T-TG-GG----G
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               56281 15 +     65473 -----------------T---GA----------G-A-AA---A-T-T-TG-GG----G
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194003555 24 - 194193292 tt----t-t-t-gttc-t---ga----------G-A-A---GC-T-T-TG-TT----G
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                   509 24 +      6782 -T----C-T-T-GTCC-A---CA----------G-A-AATTTC-T-T-T---T----A
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 I 4
s Tonatia_saurophila.TonSau_scaffold_3334                  132776 21 -    259118 -T----T-T-T--TCC-T---AA----------AAA-AA---T-G-T-C---T----T
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        22633 24 +     38948 TT----T-T-T-GTTC-T---AA----------G-A-A---GC-T-T-TG-TT----G
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   16360 24 -     32910 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       22258 24 +     24652 TT----T-T-T-GTTC-T---AA----------G-A-A---GC-T-T-TG-TT----G
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      1143 24 -      3559 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           39082 24 -     54611 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       15081 24 +     17312 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    22451 24 -     25040 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          1117 24 +      3528 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  47479 24 +     51589 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       10647 24 +     14732 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       1125 24 -     28054 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44655920 24 -  44834318 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                         930 24 +      3372 TT----T-T-T-GTTC-T---GA----------G-A-A---GC-T-T-TG-TT----G
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   2134 16 +     90398 -------------TCC-T---GA----------G-A-AA---C-C-T-T---T----T
i Tragulus_javanicus.TraJav_scaffold_14717              I 2 C 0
s Trichechus_manatus.JH594618.1                          16078231 21 +  31416278 -T----T-G-T-TTCC-T---GA----------G-A-AA---C-A-T-T---T----T
i Trichechus_manatus.JH594618.1                         C 0 I 4
s Tupaia_chinensis.KB320831.1                             2787255 19 -   3938065 -t----tat-t-gtcc-t---CA----------G-A-AA---T-T-T-----------
i Tupaia_chinensis.KB320831.1                           C 0 I 2
s Tupaia_tana.TupTan_flattened_line_3657864                   227 18 +       342 -T----T-T-T-GTCC-T---CA----------G-A-AA---C-T-T-----------
i Tupaia_tana.TupTan_flattened_line_3657864             C 0 I 2
s Tursiops_truncatus.MRVK01000923.1                      69310247 18 -  96451834 -T----T-C-C-GTCC-T---GA----------G-A-AA--CA-T-------------
i Tursiops_truncatus.MRVK01000923.1                     C 0 I 3
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 23457 14 -     25548 -T----T-T-T-GTTC-T---GA----------G-A-A--------------------
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 I 7
s Ursus_maritimus.KK498671.1                              6510877 21 +  28682327 -T----T-T-T-GGCC-T---GA----------G-A-AA---C-T-T-T---G----T
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  1791 23 -     20643 tt----T-T-T-GTCC-T---GA----------G-A-T---GC-T-T-C--TT----A
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             21336 23 -     33872 tt----T-T-T-GTCC-T---GA----------G-A-T---GC-T-T-C--TT----A
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1521560 21 -   2331223 -T----T-C-T-GTCC-T---GA----------G-A-AA---C-G-C-C---T----T
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                134030 21 -    281493 -T----T-T-T-GTCC-T---GA----------G-A-AA---A-T-T-C---T----T
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       123353 21 -    134049 -t----t-t-G-GTCC-T---GG----------G-A-AA---C-A-T-T---T----G
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        210580 16 -    227762 -T----T-T-T-GACC-T---GA----------G-A-AA---C---------------
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     12212 17 -     20485 ------------GCCC-T---GG----------G-A-AA---T-T-T-T---G----A
i Zapus_hudsonius.ZapHud_scaffold_64392                 I 2 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           3750 18 -      8775 -T----T-C-C-ATCC-T---GA----------G-A-AA--CA-T-------------
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 I 3
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16291  1 -    119109 I
e Hylobates_pileatus_b.LG03                                     92553610  0 - 189753342 C
e Otolemur_garnettii.GL873528.1                          18004869 68 -  38779656 I
e Otolemur_crassicaudatus.k141_321880                       35431 68 +     38679 I
e Galagoides_demidoff.k141_1769638                           6763 68 +     27357 I
e Galago_senegalensis.k141_964197                            9743 68 -     43889 I
e Galago_moholi.ctg555                                     207363 68 -    847004 I
e Dolichotis_patagonum.DolPat_scaffold_14102                33375  0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             56104 16 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                14631 16 +     26546 I
e Cricetulus_griseus.LT883672.1                          53025429  0 +  72327488 C
e Cavia_tschudii.CavTsc_scaffold_488                       173989  0 +    436027 C
e Cavia_porcellus.DS562889.1                             15795798  0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15783848 16 -  24422027 I
e Castor_canadensis.CasCan_scaffold_47037                   27015  0 +     33760 C

a score=0.000000
s hg38.chr4_GL000008v2_random                                8194 22 +    209709 GG--A-------CTT-T----CAGCTAGG-------A-------------G-----A-TA-A--T
s Acinonyx_jubatus.LLWD01000356.1                         2030290 24 +   3721120 TA--GGA-A-T-T---T----CAGCTAAG-------G-------------A-----A-TA-A--T
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    108572  9 -    189883 ---------------------------GG-------T-------------G-----A-TA-A--A
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10653623 24 +  23371972 TA--GGA-A-T-T---T----CGGCTAGT-------C-------------A-----A-TA-A--T
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7090125 24 -  16596857 TA--AGA-A-T-T---T----CTGCTAGT-------C-------------A-----A-TA-A--T
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                    8857  9 -     22067 ---------------------------GA-------G-------------G-----A-TA-A--A
i Allactaga_bullata.AllBul_scaffold_70162               C 0 I 4
s Allenopithecus_nigroviridis.k141_3103707                  59217 22 +     61638 GG--A-------CTT-T----CCGCTAGG-------A-------------A-----A-TA-A--T
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        51025 22 +     53391 GG--A-------CTT-T----CCACTAGG-------A-------------A-----A-TA-A--T
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         1749 22 +     72529 GG--A-------CTT-T----CCACTAGG-------A-------------A-----A-TA-A--T
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          1325 22 +      3797 GG--A-------CTT-T----CCACTAGG-------A-------------A-----A-TA-A--T
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             6419 22 -     18050 GG--A-------CTT-T----CAGCTAGG-------A-------------A-----A-TG-A--T
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  7536 22 -     11521 GG--A-------CTT-T----CAGCTAGG-------A-------------A-----A-TG-A--T
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              7094 22 -     21359 GG--A-------CTT-T----CAGCTAGG-------A-------------A-----A-TG-A--T
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1856473                                5477 22 +      7227 GG--A-------CTT-T----CAGCTAGG-------A-------------A-----A-TG-A--T
i Alouatta_juara.k141_1856473                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          6392 22 -     10438 GG--A-------CTT-T----CAGCTAGG-------A-------------A-----A-TG-A--T
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            3046 22 +      7047 GG--A-------CTT-T----CAGCTAGG-------A-------------A-----A-TG-A--T
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             6330 22 +     10410 GG--A-------CTT-T----CAGCTAGG-------A-------------A-----A-TG-A--T
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1374428                             133 22 -     25526 GG--A-------CTT-T----CAGCTAGG-------A-------------A-----A-TG-A--T
i Alouatta_puruensis.k141_1374428                       N 0 C 0
s Alouatta_seniculus.k141_990213                             3051 22 +      6429 GG--A-------CTT-T----CAGCTAGG-------A-------------A-----A-TG-A--T
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3516789 24 +   4113121 TG--GAA-A-T-T---T----CAGCTAGG-------G-------------A-----A-TC-A--C
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      387247 24 -    631301 TG--GGA-A-T-T---T----CAGCTAGG-------G-------------A-----A-TA-A--T
i Anoura_caudifer.AnoCau_scaffold_422                   I 7 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            27694 24 +     33004 TG--GAA-A-T-T---T----CAGCTAGG-------C-------------A-----A-TC-A--T
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 58725 21 +     78111 GG--A-------CCT-T----CAGCTA-G-------A-------------A-----A-TA-A--T
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            1656 21 +     22701 GG--A-------CCT-T----CAGCTA-G-------A-------------A-----A-TA-A--T
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5745616 21 +   9889416 GG--A-------CCT-T----CAGCTA-G-------A-------------A-----A-TA-A--T
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             2208 21 -    104377 GG--A-------CCT-T----CAGCTA-G-------A-------------A-----A-TA-A--T
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               2208 21 +     23246 GG--A-------CCT-T----CAGCTA-G-------A-------------A-----A-TA-A--T
i Aotus_vociferans.k141_718647                          C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      14503 23 +     17483 GG--A-------CTTAA----CAGCTAGC-------A-------------A-----A-TA-T--T
i Arctocebus_calabarensis.k141_1161114                  C 0 I 30
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 5346 24 -     29036 GG--GGA-A-T-T---T----CAGCTAGG-------G-------------A-----A-TA-A--T
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9535469 22 +  39197703 GG--A-------CTT-T----CAGCTAGG-------A-------------A-----A-TG-A--T
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             56757 22 +     85812 GG--A-------CTT-T----CAGCTAGG-------A-------------A-----A-TG-A--T
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 7754 22 +     89302 GG--A-------CTT-T----CAGCTAGG-------A-------------A-----A-TG-A--T
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             12263 22 -     58268 GG--A-------CTT-T----CAGCTAGG-------A-------------A-----A-TG-A--T
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             60251 22 +    119057 GG--A-------CTT-T----CAGCTAGG-------A-------------A-----A-TG-A--T
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               2201 22 -     25888 GG--A-------CTT-T----CAGCTAGG-------A-------------A-----A-TG-A--T
i Ateles_paniscus.k141_1631200                          I 8 C 0
s Avahi_laniger.k141_2840928                                 3061 20 -     16375 GG--C-------CTT-T----CAGCTAGC-------G-------------A-----A-TA-----
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_767228                               9033 20 -      9688 GG--C-------CTT-T----CAGCTAGC-------G-------------A-----A-TA-----
i Avahi_peyrierasi.k141_767228                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26376993 24 +  51448160 tg--gaa-a-t-t---t----cAGCTAGG-------G-------------A-----A-TC-A--t
i Balaenoptera_acutorostrata.KI537095.1                 I 3 C 0
s Balaenoptera_bonaerensis.DF502048.1                        2224 24 -     13118 tg--gaa-a-t-t---G----CAGCTAGG-------G-------------A-----A-TC-A--t
i Balaenoptera_bonaerensis.DF502048.1                   I 3 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   39889 24 -     72089 TG--GAA-A-T-T---T----CAGCTAGG-------G-------------A-----A-TC-A--T
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6556311 24 +   6870073 tG--GAA-A-T-T---T----CAGCTAGG-------G-------------A-----A-TC-A--C
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138136542 24 - 161108492 tG--GAA-A-T-T---T----CAGCTAGG-------G-------------A-----A-TC-A--N
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     568920 24 -    998990 tG--GAA-A-T-T---T----CAGCTAGG-------G-------------A-----A-TC-A--C
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136292275 24 - 158972876 tG--GAA-A-T-T---T----CAGCTAGG-------G-------------A-----A-TC-A--C
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1227896 24 -   1914593 tG--GAA-A-T-T---T----CAGCTAGG-------G-------------A-----A-TC-A--C
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               110126 22 -    171031 GG--A-------CTT-T----CAGGTAGG-------A-------------A-----A-TA-A--T
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                  9152 22 +    125063 GG--A-------CTT-T----CAGGTAGG-------A-------------A-----A-TA-A--T
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                11200 22 -    216513 GG--A-------CTT-T----CAGGTAGG-------A-------------A-----A-TA-A--T
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        3739 22 -    134917 GG--A-------CTT-T----CAGGTAGG-------A-------------A-----A-TA-A--T
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3216028 24 -   8989139 TG--GAA-A-T-T---T----CAGCTAAG-------G-------------A-----G-TA-A--T
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           394215 24 -  15254737 TG--GAA-A-T-T---T----CAGCTAAG-------G-------------A-----G-TA-A--T
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2969949 24 +   6889770 TG--GAA-A-T-T---T----CAGCTAAG-------G-------------A-----G-TA-A--T
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11515011 24 +  39901454 TA--AGA-A-T-T---T----TAGCTAGT-------C-------------A-----A-TT-A--T
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   10028 24 +     87036 TA--AGA-A-T-T---T----TGGCTAGT-------C-------------A-----A-TT-A--T
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11261670 24 -  35597290 ta--aga-a-t-t---t----taGCTAGT-------C-------------A-----A-TT-A--T
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11084199 24 +  39895921 ta--aga-a-t-t---t----taGCTAGT-------C-------------A-----A-TT-A--T
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16451233 24 -  44759192 ta--aga-a-t-t---t----taGCTAGT-------C-------------A-----A-TT-A--T
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21321896 24 + 157394656 tg--GAA-A-C-T---T----CAGCTAGG-------G-------------A-----A-TC-A--C
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135703123 24 - 157403528 TG--GAA-A-C-T---T----CAGCTAGG-------G-------------A-----A-TC-A--C
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_647363                   751  8 +      1887 ----------------------------A-------G-------------G-----A-TA-A--C
i Capromys_pilorides.CapPil_scaffold_647363             C 0 I 4
s Carlito_syrichta.NW_007248099.1                          305500 24 +    345090 GTGTA-------CTT-T----CAGGTAGG-------G-------------A-----G-TA-A--A
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               56427 24 +     67245 TG--GGA-A-T-T---T----CAGCTAGG-------A-------------A-----A-TA-A--T
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   155741 24 -    276539 TG--GAA-A-T-A---T----CACCTAGG-------A-------------A-----A-TA-A--T
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18886937 22 -  29618158 GG--A-------CTT-T----CAGCTAGG-------A-------------A-----A-TA-A--T
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 4483 22 -     26817 GG--A-------CTT-T----CAGCTAGG-------A-------------A-----A-TA-A--T
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                 8723 22 +     25043 GG--A-------CTT-T----CAGCTAGG-------A-------------A-----A-TA-A--T
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         4536 24 +     21754 GGGTA-------CTT-T----CAGGTAAG-------G-------------A-----G-TA-A--A
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4359556 24 +   7569818 TG--GGA-A-T-C---T----CAGCAAAG-------C-------------A-----A-TG-A--T
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_305802         1198 24 +      1857 TG--GGA-A-T-C---T----CAGCAAAG-------C-------------A-----A-TG-A--T
i Ceratotherium_simum_cottoni.CerCot_scaffold_305802    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6551013 22 +   6739814 GG--A-------CTT-T----CCACTAGG-------A-------------A-----A-TA-A--T
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      52490 22 -     54931 GG--A-------CTT-T----CCGCTAGG-------A-------------A-----A-TA-A--T
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         17474 22 -     19697 GG--A-------CTT-T----CCACTAGG-------A-------------A-----A-TA-A--T
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         55005 22 -    107033 GG--A-------CTT-T----CCGCTAGG-------A-------------A-----A-TA-A--T
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        1448 22 -      3853 GG--A-------CTT-T----CCGCTAGG-------A-------------A-----A-TA-A--T
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          25380 22 +     30494 GG--A-------CTT-T----CCGCTAGG-------A-------------A-----A-TA-A--T
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           1403 22 -      4022 GG--A-------CTT-T----CCGCTAGG-------A-------------A-----A-TA-A--T
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          1295 22 -      3505 GG--A-------CTT-T----CCGCTAGA-------A-------------A-----A-TA-A--T
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           20104 22 +     35983 GG--A-------CTT-T----CCGCTAGG-------A-------------A-----A-TA-A--T
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11985880 22 +  12117833 GG--A-------CTT-T----CCgatagg-------a-------------a-----a-ta-a--g
i Cercopithecus_albogularis.ctg51                             C 0 I 2
s Cercopithecus_mona.ctg12                               46473376 22 +  46592721 GG--A-------CTT-T----CCGCTAGG-------A-------------A-----A-TA-A--T
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      31203 22 +     33420 GG--A-------CTT-T----CCGCTAGG-------A-------------A-----A-TA-A--T
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        1239 22 -      3443 GG--A-------CTT-T----CCGCTAGG-------A-------------A-----A-TA-A--T
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      2230 22 -      4669 GG--A-------CTT-T----CCGCTAGG-------A-------------A-----A-TA-A--T
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        2034 22 -      4411 GG--A-------CTT-T----CCGCTAGG-------A-------------A-----A-TA-A--T
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         1554 22 -      4205 GG--A-------CTT-T----CCGCTAGG-------A-------------A-----A-TA-A--T
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           55397 20 -     68416 GG--C-------CTT-C----CAGCTAGT-------A-------------A-----A-TA-----
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            4453 13 +     13308 ---------------------CAGCTAGT-------A-------------A-----A-TA-----
i Cheirogaleus_medius.k141_133808                       I 6 C 0
s Cheracebus_lucifer.k141_619653                             1736 22 -     18223 GG--A-------CTT-T----CAGCTAGG-------A-------------A-----A-TA-A--T
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             18759 22 +     25473 GG--A-------CTT-T----CAGCTAGG-------A-------------A-----A-TA-A--T
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           37798 22 +     57117 GG--A-------CTT-T----CAGCTAGG-------A-------------A-----A-TA-A--T
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          42473 22 +     54541 GG--A-------CTT-T----CAGCTAGG-------A-------------A-----A-TA-A--T
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15957902  8 +  43084221 ----------------------------G-------G-------------G-----A-TA-A--T
i Chinchilla_lanigera.JH721867.1                        C 0 I 4
s Chiropotes_israelita.k141_1189915                         67347 22 +    196370 GG--A-------CTT-T----CAGGTAGG-------A-------------A-----A-TA-A--T
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          11521 22 +     40510 GG--A-------CTT-T----CAGGTAGG-------A-------------A-----A-TA-A--T
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15134834 22 -  15256731 GG--A-------CTT-T----CCGCTAGG-------A-------------A-----A-TA-A--T
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      29880 22 -     53260 GG--A-------CTT-T----CCGCTAGG-------A-------------A-----A-TA-A--T
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101140328 22 + 101219884 GG--A-------CTT-T----CCGCTAGG-------A-------------A-----A-TA-A--T
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                13434 17 -     21363 ------------T---T----CAGCTAGG-------G-------------A-----A-AA-C--C
i Choloepus_didactylus.ChoDid_scaffold_36182            I 4 C 0
s Choloepus_hoffmanni.KN194586.1                           758740 17 +    964067 ------------T---T----CAGCTAGG-------G-------------A-----A-AA-C--C
i Choloepus_hoffmanni.KN194586.1                        I 4 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_141308              5516 17 -     12508 ------------T---G----AAACTAGA-------G-------------A-----C-TA-A--C
i Chrysochloris_asiatica.ChrAsi_scaffold_141308         I 4 C 0
s Colobus_angolensis.KN985967.1                          10878910 22 +  10971483 GG--A-------CTT-T----CCACTAGG-------A-------------A-----A-TA-A--T
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147660069 22 + 156195979 GG--A-------CTT-T----CCACTAGG-------A-------------A-----A-TA-A--T
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            12054 22 +     23629 GG--A-------CTT-T----CCACTAGG-------A-------------A-----A-TA-A--T
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60609709 23 +  78930452 TG--G-A-ACT-T---T----TAGTGAAG-------A-------------A-----ATCA-----
i Condylura_cristata.JH655880.1                         I 7 I 1
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         35814 36 -     40477 TG--GGA-T-T-T---T----CAGCTAGG-------GATTA-ATGCATGAA-----A-TA-A--T
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 274011  9 -    399297 ---------------------------GG-------T-------------G-----A-TA-A--A
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             15639 27 -     19186 TT--G-A-A-TTT---C----CAGTTAAG-------G-------------ATTCAAA-TA-----
i Crocidura_indochinensis.CroInd_scaffold_38409         I 2 I 1
s Cryptoprocta_ferox.CryFer_flattened_line_19014            48324 17 -     70449 ------------T---T----CAGCTAAG-------G-------------A-----A-TA-A--T
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 4 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  204728  9 -    956709 ---------------------------TG-------G-------------A-----G-TA-A--T
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 26912  8 -     67205 ----------------------------T-------G-------------G-----A-TA-A--C
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 I 4
s Dasypus_novemcinctus.JH568778.1                          178612 17 -   6883506 ------------T---T----CAACTAGG-------G-------------A-----A-AA-A--C
i Dasypus_novemcinctus.JH568778.1                       I 4 C 0
s Daubentonia_madagascariensis.ctg11                     16841271 20 +  31942871 AG--A-------CTT-T----CAGCTAGC-------G-------------A-----A-TA-----
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80033732 24 -  96802777 TG--GAA-A-C-T---T----CAGCTAGG-------G-------------A-----A-TC-A--t
i Delphinapterus_leucas.KZ290064.1                      I 3 C 0
s Desmodus_rotundus.KZ672188.1                           18695734 24 -  18957592 tg--gga-a-t-T---T----CAGCCAGG-------G-------------A-----A-TA-A--T
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 318864 24 +    993696 TG--GGA-A-T-C---T----CAGCAAAG-------G-------------A-----A-TG-A--T
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_24487                 61019 24 +     62380 TG--GGA-A-T-C---T----CAGCAAAG-------G-------------A-----A-TG-A--T
i Diceros_bicornis.DicBicMic_scaffold_24487             C 0 C 0
s Echinops_telfairi.JH980316.1                           22990771 17 -  44670279 ------------T---C----CAGCTAAA-------G-------------G-----A-TA-A--T
i Echinops_telfairi.JH980316.1                          I 4 I 8
s Eidolon_helvum.KE772537.1                                  9105 35 +     24177 TG--GGA-A-T-T---T----CAGCTAAA-------AATTACAT--ATGGA-----A-TA-A--T
i Eidolon_helvum.KE772537.1                             I 2 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1488434 24 +   1727528 TG--GAA-A-T-T---T----CAACTAGG-------G-------------A-----A-TC-A--T
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7803160 21 +  15467074 ------------T---ACCTACCTCTAAG-------G-------------A-----A-TA-A--G
i Elephantulus_edwardii.JH947210.1                      I 4 C 0
s Ellobius_lutescens.LOEQ01003611.1                        235657  9 -    369425 ---------------------------GA-------T-------------G-----A-TA-A--A
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           2667  9 -      7838 ---------------------------GG-------T-------------G-----A-TA-A--A
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85866932 24 +  99434291 GA--AGA-A-T-T---T----CCGCTAGT-------C-------------A-----A-TA-A--T
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Equus_asinus.JREZ01000137.1                             2952124 24 -   4388051 TG--GGA-A-T-C---T----CAGCTTGG-------G-------------A-----A-TA-G--T
i Equus_asinus.JREZ01000137.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13346135 24 +  41866177 TG--GGA-A-T-C---T----CAGCTTGG-------G-------------A-----A-TA-G--T
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                           8127 24 +     92910 TG--GGA-A-T-C---T----CAGCTTGG-------G-------------A-----A-TA-G--T
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erythrocebus_patas.Contig8                             48767013 22 -  48907691 GG--A-------CTT-T----CTGCTAGG-------A-------------A-----A-TA-A--T
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          311877 24 +    330699 TG--GAA-A-T-T---T----CAGCTAGG-------G-------------A-----A-TC-A--T
i Eschrichtius_robustus.EscRob_flattened_line_685       I 3 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             58306 24 +     89355 TG--GAA-A-T-T---T----CAGCTAGG-------G-------------A-----A-TC-A--T
i Eubalaena_japonica.EubJap_flattened_line_7756         I 3 C 0
s Eulemur_albifrons.k141_715837                              1468 20 +     13586 AG--C-------CTT-T----CAGCTAGC-------G-------------A-----A-TA-----
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               1405 20 -      6809 AG--C-------CTT-T----CAGCTAGC-------G-------------A-----A-TA-----
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             7875 20 +     36558 AG--C-------CTT-T----CAACTAGC-------G-------------A-----A-TA-----
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             4192 20 +     60246 AG--C-------CTT-T----CAGCTAGC-------G-------------A-----A-TA-----
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 7680 20 +    109717 AG--C-------CTT-T----CAGCTAGC-------G-------------A-----A-TA-----
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               12054 20 +     16540 AG--C-------CTT-T----CAGCTAGC-------G-------------A-----A-TA-----
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                12331 20 +     27497 AG--C-------CTT-T----CAACTAGC-------A-------------A-----A-TA-----
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           14787 20 +     26808 AG--C-------CTT-T----TAGCTAGC-------G-------------A-----A-TA-----
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                29521 20 +     46535 AG--C-------CTT-T----CAGCTAGC-------G-------------A-----A-TA-----
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              12244 20 -     29447 AG--C-------CTT-T----CAGCTAGC-------G-------------A-----A-TA-----
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129889270 24 - 159252932 TA--GGA-A-T-T---T----CAGCTAAG-------G-------------A-----A-TA-A--T
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129276344 24 - 158578461 TA--GGA-A-T-T---T----CAGCTAAG-------G-------------A-----A-TA-A--T
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 17479 24 +     52776 TA--GGA-A-T-T---T----CAGCTAAG-------G-------------A-----A-TA-A--T
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13889474  8 -  19261668 ----------------------------G-------G-------------T-----A-TA-A--T
i Fukomys_damarensis.KN123630.1                         C 0 I 18
s Galeopterus_variegatus.GalVar_scaffold_354               152724 22 +    324696 GG--A-------CTT-T----CAGCTAGG-------G-------------A-----A-TA-A--T
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    177947 24 -    189561 tg--gaA-A-T-T---T----CAGCTAGG-------G-------------A-----A-TC-A--C
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                            9146  9 -     18683 ---------------------------GG-------G-------------G-----G-TA-A--T
i Glis_glis.GliGli_scaffold_79770                       I 4 I 13
s Gorilla_beringei.k141_111300                               1587 22 -     14630 GG--A-------CTT-T----CAGCTAGG-------A-------------A-----A-TA-A--C
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119648685 22 - 195582420 GG--A-------CTT-T----CAGCTAGG-------A-------------A-----A-TA-A--C
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   73710  9 +    118900 ---------------------------GG-------G-------------A-----G-TA-A--T
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 I 8
s Hapalemur_alaotrensis.k141_1198205                         2015 20 +      3980 GG--C-------CTT-T----CAGCTAGT-------G-------------A-----A-TA-----
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             24495 20 +     26611 GG--C-------CTT-T----CAGCTAGT-------G-------------A-----A-TA-----
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             1949 20 +     56096 GG--C-------CTT-T----CAGCTAGT-------G-------------A-----A-TA-----
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        25222 20 -     42470 GG--C-------CTT-T----CAGCTAGT-------G-------------A-----A-TA-----
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        41819 20 -     54384 GG--C-------CTT-T----CAGCTAGT-------G-------------A-----A-TA-----
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              13249 16 +     53719 ------------T---T----C-GCTAAG-------G-------------A-----A-TA-A--T
i Helogale_parvula.HelPar_flattened_line_22962          I 4 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                24301 24 -     91191 TG--GAA-A-C-T---T----CAGCTAGG-------G-------------A-----A-TC-A--C
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2547583  8 +  31725842 ----------------------------G-------G-------------G-----A-TA-A--T
i Heterocephalus_glaber.JH602058.1                      C 0 I 18
s Heterohyrax_brucei.HetBruBak_scaffold_25354               53000 17 +     73687 ------------T---G----CATCTGGG-------T-------------A-----A-TA-A--C
i Heterohyrax_brucei.HetBruBak_scaffold_25354           I 4 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              144002 24 +    277961 TG--G-ACA-T-T---T----CAGCTAGA-------G-------------A-----G-GC-A--T
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      275417 33 -    477199 TG--GGA-A-T-T---T----CAGCTGAG-------GA--A--TGTAGGAA-----A-TA-A--T
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              4572 33 -      9143 TG--GGA-A-T-T---T----CAGCTAGA-------GA--A--TGTAGGAA-----A-TA-A--T
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg649                                    98259 22 +    115816 GG--A-------CTT-T----CAGCTAGG-------A-------------A-----A-TA-A--T
i Hoolock_leuconedys.ctg649                                C 0 I 25
s Hyaena_hyaena.HyaHya_flattened_line_20729                 12588 24 -     67322 TA--GGA-A-T-T---T----CAGCTAAG-------G-------------G-----A-AA-A--T
i Hyaena_hyaena.HyaHya_flattened_line_20729             I 9 C 0
s Hylobates_abbotti.k141_493872                              1396 22 +      5897 GG--A-------CTT-T----CAGCTAGG-------A-------------A-----A-TA-A--T
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_282275                                609 22 +      1846 GG--A-------CTT-T----CAGCTAGG-------A-------------A-----A-TA-A--T
i Hylobates_agilis.k141_282275                          C 0 C 0
s Hylobates_klossii.k141_466549                              7854 22 +     11537 GG--A-------CTT-T----CAGCTAGG-------A-------------A-----A-TA-A--T
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_muelleri.k141_1133650                             831 22 -      2775 GG--A-------CTT-T----CAGCTAGG-------A-------------A-----A-TA-A--T
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             29433 22 -     60944 GG--A-------CTT-T----CAGCTAGG-------A-------------A-----A-TA-A--T
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     2568  8 +     22540 ----------------------------T-------G-------------G-----A-TA-A--T
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7122249  9 +  13083262 ---------------------------TG-------g-------------g-----a-ta-a--t
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_3334527                                   8459 20 +      9207 GG--C-------CTT-T----CAGCTAGC-------G-------------A-----A-TA-----
i Indri_indri.k141_3334527                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               5659 24 +     17520 TG--GAA-A-T-T---T----CAGCCAGG-------G-------------A-----A-TC-A--T
i Inia_geoffrensis.IniGeo_flattened_line_66725          I 3 I 3
s Jaculus_jaculus.JH725517.1                              8561819  9 +  11848649 ---------------------------GA-------G-------------G-----A-TA-A--A
i Jaculus_jaculus.JH725517.1                            C 0 I 4
s Kogia_breviceps.KogBre_flattened_line_35920               20491 24 +     37189 TG--GAA-A-T-T---T----CAGCTAGG-------G-------------A-----A-TC-G--T
i Kogia_breviceps.KogBre_flattened_line_35920           I 3 C 0
s Lagothrix_lagothricha.k141_12968                          46312 22 -    147782 GG--A-------CTT-T----CAGCTAGG-------A-------------A-----A-TG-A--T
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   110610 24 -    115756 TG--GAA-A-T-T---T----CAACTAAG-------G-------------G-----A-TA-A--T
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258403498 20 - 285822530 GG--C-------CTT-T----CAGCTAGT-------G-------------A-----A-TA-----
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        20392 20 +     39228 GG--C-------CTT-T----CAGCCAGT-------T-------------A-----A-TA-----
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            49768 20 +     63517 GG--C-------CTT-T----CAGCTAGT-------T-------------A-----A-TA-----
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        74988 20 +    116806 GG--C-------CTT-T----CAGCTAGT-------T-------------A-----A-TA-----
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     28029 20 -     33031 GG--C-------CTT-T----CAGCTAGT-------T-------------A-----A-TA-----
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3082291 24 -   3498232 TA--AGA-A-T-T---T----CAGCTAGT-------C-------------A-----A-TA-A--T
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lipotes_vexillifer.KE558548.1                            132838 24 +   3060487 TG--GAA-A-T-T---T----CAGCTAGG-------G-------------A-----A-TC-A--t
i Lipotes_vexillifer.KE558548.1                         I 3 C 0
s Lophocebus_aterrimus.ctg55                             19244099 22 +  19376315 GG--A-------CTT-T----CCGCTAGG-------A-------------A-----A-TA-A--T
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            7007 22 +     84689 gg--a-------ctt-a----cagctagc-------a-------------a-----a-ta-t--t
i Loris_lydekkerianus.k141_550999                       C 0 I 115
s Loris_tardigradus.ctg97                                 3774765 22 +   6799190 gg--a-------ctt-a----cagctagc-------a-------------a-----a-ta-t--t
i Loris_tardigradus.ctg97                               C 0 I 115
s Loxodonta_africana.GL010040.1                          20587575 17 -  62548349 ------------T---G----CACCTAGG-------G-------------A-----A-TC-A--T
i Loxodonta_africana.GL010040.1                         I 4 C 0
s Lycaon_pictus.CM007556.1                               11083655 24 +  39895028 ta--aga-a-t-t---t----tgGCTAGT-------C-------------A-----A-TT-A--T
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             15785 22 +     74745 GG--A-------CTT-T----CTGCTAGG-------A-------------A-----A-TC-A--T
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12702291 22 +  12821369 GG--A-------CTT-T----CTGCTAGG-------A-------------A-----A-TC-A--T
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               4384 22 +      6569 GG--A-------CTT-T----CCGCTAGG-------A-------------A-----A-TC-A--T
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           42684 22 +     63263 GG--A-------CTT-T----CCGCTAGG-------A-------------A-----A-TC-A--T
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_1068107                               11261 22 +     12679 GG--A-------CTT-T----CCGCTAGG-------A-------------A-----A-TC-A--T
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                 834 22 +      3017 GG--A-------CTT-T----CTGCTAGG-------A-------------A-----A-TC-A--T
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  42446 22 -     79256 GG--A-------CTT-T----CCACTAGG-------A-------------A-----A-TC-A--T
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196031366 22 + 196197964 GG--A-------CTT-T----CTGCTAGG-------A-------------A-----A-TC-A--T
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11441470 22 +  11645122 GG--A-------CTT-T----CCGCTAGG-------A-------------A-----A-TC-A--T
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   1396 22 -     46448 GG--A-------CTT-T----CCGCTAGG-------A-------------A-----A-TC-A--T
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                1223 22 -      3617 GG--A-------CTT-T----CCGCTAGG-------A-------------A-----A-TC-A--T
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 11556 22 -     55006 GG--A-------CTT-T----CCGCTAGG-------A-------------A-----A-TC-A--T
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43836595 22 +  43892939 GG--A-------CTT-T----CTGCTAGG-------A-------------A-----A-TC-A--T
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                3818 22 -      5978 GG--A-------CTT-T----CTGCTAGG-------A-------------A-----A-TC-A--T
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               1398 22 -     27140 GG--A-------CTT-T----CCGCTAGG-------A-------------A-----A-TC-A--T
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43433259 22 -  43563597 GG--A-------CTT-T----CCGCTAGG-------A-------------A-----A-TA-A--T
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4446085 22 -   4543643 GG--A-------CTT-T----CCGCTAGG-------A-------------A-----A-TA-A--T
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            142904 23 +    252755 TA--GGA---T-T---T----TGGCTAGG-------G-------------A-----A-TC-C--T
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             32969 23 +     58827 TA--GGA---T-T---T----TGGCTAGG-------G-------------A-----A-TC-C--T
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36870096  9 +  64221397 ---------------------------CG-------g-------------g-----a-ta-a--t
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       61395 36 -    234502 TG--GGA-G-T-T---T----CAGCTGGG-------TACTA-ACGCAGGAA-----A-TA-A--T
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_1828            224489 24 -    226874 GA--AGA-A-T-T---T----CGGCTAGT-------C-------------A-----A-TA-A--T
i Mellivora_capensis.MelCap_flattened_line_1828         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233                8032  9 +     15977 ---------------------------TG-------T-------------A-----A-TA-A--A
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1042953  9 -  26018355 ---------------------------GG-------T-------------G-----A-TA-A--A
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_183284                    530 24 +      2166 TG--GAA-A-T-T---T----CAGCTAGG-------G-------------A-----A-TC-A--T
i Mesoplodon_bidens.MesBid_scaffold_183284              I 3 C 0
s Microcebus_murinus.CM007691.1                          16506613 20 +  47401472 GG--C-------CTT-T----CAGCTAGT-------G-------------A-----A-TA-----
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  27720 17 -     48017 ------------T---C----CAGCTATA-------G-------------G-----A-TA-A--T
i Microgale_talazaci.MicTal_scaffold_34660              I 4 I 8
s Micronycteris_hirsuta.MicHir_scaffold_37978               19583 24 -     32043 TG--GGA-A-T-T---T----CAGCTAGG-------G-------------A-----A-TA-A--T
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22815318  9 -  98408828 ---------------------------GG-------T-------------G-----A-TA-A--A
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8206323 24 +  10048721 TG--GGA-A-T-T---T----CAGCTAGG-------A-------------A-----A-TA-A--C
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            31000 24 +     45743 CG--GGA-A-T-T---T----CAGCTAGG-------A-------------A-----A-TA-A--C
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        31933 22 +     34273 GG--A-------CTT-T----CCGCTAGG-------A-------------A-----A-TA-A--T
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         7589 24 -    104932 TA--AGA-A-T-T---T----CAGCTAGT-------C-------------A-----A-TA-A--T
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     2027 20 +      8497 GG--C-------CTT-T----CAGCTAGT-------G-------------A-----A-TA-----
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 143257 24 +    154973 TG--GAA-A-C-T---T----CAGCTAGG-------G-------------A-----A-TC-A--T
i Monodon_monoceros.MonMon_M_scaffold_5598              I 3 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                157904 24 +    265003 TT--GGA-A-T-T---T----CAGCTAGG-------G-------------A-----A-TA-A--T
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 1532 24 -      4346 TG--GAA-A-T-T---T----CAGCTAAG-------G-------------A-----A-TC-A--C
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  140945 16 -    168139 ------------T---T----C-GCTAAG-------G-------------A-----A-TG-A--T
i Mungos_mungo.MunMun_flattened_line_8729               I 4 C 0
s Murina_feae.MurFea_scaffold_2254                          16121 22 -    100666 TG--GAA-A-T-T---T----CAACTAGG-------G-------------A-----A-TA-----
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70761498  9 +  92629107 ---------------------------AG-------T-------------G-----A-TA-A--A
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75484573  9 +  98207768 ---------------------------AG-------T-------------G-----A-TA-A--A
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67549113  9 +  89017189 ---------------------------ag-------t-------------g-----a-TA-A--A
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74324211  9 +  97876770 ---------------------------AG-------T-------------G-----A-TA-A--A
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              7026  9 +     98495 ---------------------------AG-------G-------------G-----G-CA-A--T
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 I 11
s Mustela_putorius.JH417978.1                             4419342 24 -  28371801 GA--AGA-A-T-T---T----CCGCTAGT-------C-------------A-----G-TA-A--T
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     86493  8 -    117718 ----------------------------A-------G-------------G-----A-TG-A--C
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 I 4
s Myotis_brandtii.KE161952.1                               964449 24 +   8389877 TG--GAA-A-T-T---T----CAACTAGG-------G-------------A-----A-TA-A--T
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5016126 24 +   6462685 TG--GAA-A-T-T---T----CAACTAGG-------G-------------A-----A-TA-A--T
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3462035 24 -   3747815 TG--GAA-A-T-T---T----CAACTAGG-------G-------------A-----A-TA-A--T
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         7232 24 +     66751 TG--GAA-A-T-T---T----CAACTAGG-------G-------------A-----A-TA-A--T
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             1993 18 -      8794 ------------T---T----CAGCTAGG-------G-------------A-----A-AACC--C
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        I 4 C 0
s Nannospalax_galili.KL201303.1                            107293 15 +    362372 ---------------------------G-TGTGGctt-------------g-----a-ta-a--a
i Nannospalax_galili.KL201303.1                         C 0 I 60
s Nasalis_larvatus.k141_153429                               4298 22 +     48152 GG--A-------CTT-T----CCACTAGG-------A-------------A-----A-TA-A--T
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4481190 24 -  14209539 TA--AGA-A-T-T---T----CAGCTAGT-------C-------------A-----A-TA-A--T
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3947866 24 -   4490290 TG--GAA-A-C-T---T----CAGCTAGG-------G-------------A-----A-TC-A--t
i Neophocaena_asiaeorientalis.KZ688543.1                I 3 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  46237 23 +     94413 TG--GGA-A-T-T---T----GAGCTAG--------G-------------A-----A-TA-A--T
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1223136                          10065 22 -     11253 GG--A-------CTT-T----CAGCTAGG-------A-------------A-----A-TA-A--T
i Nomascus_annamensis.k141_1223136                      n 765 C 0
s Nomascus_concolor.k141_468488                               708 22 -      1482 GG--A-------CTT-T----CAGCTAGG-------A-------------A-----A-TA-A--T
i Nomascus_concolor.k141_468488                         N 0 C 0
s Nomascus_gabriellae.k141_200970                           14009 22 -     14076 GG--A-------CTT-T----CAGCTAGG-------A-------------A-----A-TA-A--T
i Nomascus_gabriellae.k141_200970                       n 670 n 670
s Nomascus_siki_b.tarseq_80                             21171 22 -  18771707 GG--A-------CTT-T----CAGCTAGG-------A-------------A-----A-TA-A--T
i Nomascus_siki_b.tarseq_80                         I 697 C 0
s Nomascus_siki_a.k141_844529                                   446 22 +      2124 GG--A-------CTT-T----CAGCTAGG-------A-------------A-----A-TA-A--T
i Nomascus_siki_a.k141_844529                             N 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                26651 24 +   3668941 ta--aga-a-t-t---t----tgGCTAGT-------C-------------A-----A-TT-A--T
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65563353 22 -  95554990 GG--A-------ctt-a----cagctagc-------a-------------a-----a-ta-t--t
i Nycticebus_bengalensis.LG16                           C 0 I 115
s Nycticebus_coucang.k141_2051882                             198 22 +      6470 GG--A-------ctt-a----cagctagc-------a-------------a-----a-ta-t--t
i Nycticebus_coucang.k141_2051882                       C 0 I 115
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65665720 22 +  89412551 gg--a-------ctt-a----cagctagc-------a-------------a-----a-ta-t--t
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 I 115
s Octodon_degus.JH651621.1                                3675043  8 +  10294119 ----------------------------A-------G-------------G-----A-TA-A--C
i Octodon_degus.JH651621.1                              C 0 I 4
s Odobenus_rosmarus.KB229369.1                             675869  4 -   3126709 ----------------------------------------------------------TA-A--T
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1076657 24 +   1425656 TG--GAA-A-T-T---T----CAACTAGG-------G-------------A-----A-TC-A--T
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         33819 24 +     78940 TG--GAA-A-T-T---T----CAGCTAGG-------G-------------A-----A-TC-A--T
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  121135  9 +    145789 ---------------------------GG-------T-------------G-----A-TA-A--A
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  33071  9 +     62360 ---------------------------GG-------T-------------G-----A-TA-A--A
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7221550 24 -   7562323 TG--GAA-A-C-T---T----CAGCTAGG-------A-------------A-----A-TC-A--t
i Orcinus_orca.KB316965.1                               I 3 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              39788 17 -     66828 ------------T---A----CGGCTAGG-------G-------------A-----A-AA-A--C
i Orycteropus_afer.OryAfe_flattened_line_13509          I 4 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      303986 24 -    505867 ta--aga-a-t-t---t----tgGCTAGT-------C-------------A-----A-TT-A--T
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Ovis_aries.CM001582.2                                 134074103 24 - 275406953 tg--G-A-A-GCT---T----CAGCCAGG-------G-------------A-----A-TC-A--C
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      75317 24 +    140051 TG--GAA-A-C-T---T----CAGCCAGG-------G-------------A-----A-TC-A--C
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127570929 22 - 205426864 GG--A-------CTT-T----CAGCTAGG-------A-------------A-----A-TA-A--C
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120148076 22 - 196562556 GG--A-------CTT-T----CAGCTAGG-------A-------------A-----A-TA-A--C
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  30433 24 +    295523 TA--GGA-A-T-T---T----CAGCTAAG-------G-------------A-----A-TA-A--T
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3634037 24 +  18214204 TA--GGA-A-T-T---T----CAGCTAAG-------G-------------A-----A-TA-A--T
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5023814 24 -   6340057 TA--GGA-A-T-T---T----CAGCTAAG-------G-------------A-----A-TA-A--T
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1062818 24 -   1292953 tg--GAA-A-T-T---T----CAGCTAGG-------G-------------A-----A-TC-A--C
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188152044 22 - 188283584 GG--A-------CTT-T----CCGCTAGG-------A-------------A-----A-TA-A--T
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            48256 22 +     76494 GG--A-------CTT-T----CCGCTAGG-------A-------------A-----A-TA-A--T
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47509440 22 +  47705337 GG--A-------CTT-T----CCGCTAGG-------A-------------A-----A-TA-A--T
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 63423 22 -    104429 GG--A-------CTT-T----CCGCTAGG-------A-------------A-----A-TA-A--T
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  13207 22 -     29451 GG--A-------CTT-T----CCGCTAGG-------A-------------A-----A-TA-A--T
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                33612 22 +     35859 GG--A-------CTT-T----CCGCTAGG-------A-------------A-----A-TA-A--T
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    111764 24 -    135482 TA--GGA-G-T-T---T----CGGCTAAG-------G-------------A-----A-TA-G--T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           1348 22 -     23713 gg--a-------ctt-a----cagctagc-------a-------------a-----a-ta-t--t
i Perodicticus_ibeanus.k141_117958                      C 0 I 369
s Perodicticus_potto.k141_713187                            20645 22 -     27972 gg--a-------ctt-a----cagctagc-------a-------------a-----a-ta-t--t
i Perodicticus_potto.k141_713187                        C 0 I 369
s Peromyscus_maniculatus.KI615518.1                       4946240  9 -   8017169 ---------------------------GG-------T-------------G-----A-TA-A--A
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            118167 24 -    122454 TG--GAA-A-C-T---T----CAGCTAGG-------G-------------A-----A-TC-A--T
i Phocoena_phocoena.PhoPho_flattened_line_11948         I 3 C 0
s Piliocolobus_badius.k141_1497351                           1299 22 -      3310 GG--A-------CTT-T----CCACTAGG-------A-------------A-----A-TA-A--T
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       21205 22 -     82327 GG--A-------CTT-T----CCACTAGG-------A-------------A-----A-TA-A--T
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           17956 22 +     19957 GG--A-------CTT-T----CCACTAGG-------A-------------A-----A-TA-A--T
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26735965 22 +  26888534 GG--A-------CTT-T----CCACTAGG-------A-------------A-----A-TA-A--T
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            93226 23 +    112873 CT--GAA-A-T-T---T----CAACCA-G-------G-------------A-----A-TA-A--T
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             39839 22 -     61926 GG--A-------CTT-T----CAGCTAGG-------A-------------A-----A-TA-A--T
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        21268 22 +     78826 GG--A-------CTT-T----CAGCTAGG-------A-------------A-----A-TA-A--T
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              5219 22 -     15800 GG--A-------CTT-T----CAGCTAGG-------A-------------A-----A-TA-A--T
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                         8417 22 -     16101 GG--A-------CTT-T----CAGCTAGG-------A-------------A-----A-TA-A--T
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          1726 22 +      9673 GG--A-------CTT-T----CAGCTAGG-------A-------------A-----A-TA-A--T
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13470720 22 -  19735023 GG--A-------CTT-T----CAGCTAGG-------A-------------A-----A-TA-A--T
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                            9628 22 -     31692 GG--A-------CTT-T----CAGCTAGG-------A-------------A-----A-TA-A--T
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           2234 24 +     21690 TG--GAA-A-T-T---T----CAGCTAGG-------G-------------A-----A-TC-A--T
i Platanista_gangetica.PlaMin_flattened_line_72990      I 3 C 0
s Plecturocebus_bernhardi.k141_959214                       18992 22 +     44506 GG--A-------CTT-T----CAGCTAGG-------A-------------A-----A-TA-A--T
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        19210 22 +     67491 GG--A-------CTT-T----CAGCTAGG-------A-------------A-----A-TA-A--T
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                       9455 22 -     98129 GG--A-------CTT-T----CAGCTAGG-------A-------------A-----A-TA-A--T
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     19055 22 +    147771 GG--A-------CTT-T----CAGCTAGG-------A-------------A-----A-TA-A--T
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        19306 22 -     23762 GG--A-------CTT-T----CAGCTAGG-------A-------------A-----A-TA-A--T
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_2078842                         19254 22 -     19696 GG--A-------CTT-T----CAGCTAGG-------A-------------A-----A-TA-A--T
i Plecturocebus_dubius.k141_2078842                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         19128 22 +    152463 GG--A-------CTT-T----CAGCTAGG-------A-------------A-----A-TA-A--T
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      5885 22 +      8943 GG--A-------CTT-T----CAGCTAGG-------A-------------A-----A-TA-A--T
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                          8845 22 +    134592 GG--A-------CTT-T----CAGCTAGG-------A-------------A-----A-TA-A--T
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          19438 22 -     75465 GG--A-------CTT-T----CAGCTAGG-------A-------------A-----A-TA-A--T
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              183482 22 -    373494 GG--A-------CTT-T----CAGCTAGG-------A-------------A-----A-TA-A--T
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19803386 22 +  19899266 GG--A-------CTT-T----CAGCTAGG-------A-------------A-----A-TA-A--T
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               1535 22 -     15069 GG--A-------CTT-T----CCACTAGG-------A-------------A-----A-TA-A--T
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              1669 22 +     14865 GG--A-------CTT-T----CCACTAGG-------A-------------A-----A-TA-A--T
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                72864 17 +     78963 ------------T---G----CATCTGGG-------T-------------A-----A-TA-A--C
i Procavia_capensis.ProCapCap_scaffold_15315            I 4 C 0
s Prolemur_simus.MPIZ01000048.1                           6844871 20 +  12164890 GG--C-------CTT-T----CAGCTAGT-------G-------------A-----A-TA-----
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     13306 20 -     30946 GG--C-------CTT-T----CAGCTAGC-------G-------------A-----A-TA-----
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_diadema.k141_577245                           39341 20 +     52369 GG--C-------TAT-T----CAGCTAGC-------G-------------A-----A-TA-----
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         31730 20 -     44753 GG--C-------TAT-T----CAGCTAGC-------G-------------A-----A-TA-----
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            13652 20 +     27322 GG--C-------TAT-T----CAGCTAGC-------G-------------A-----A-TA-----
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       13296 20 -     53241 GG--C-------TAT-T----CAGCTAAC-------G-------------A-----A-TA-----
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         35567 20 -     48185 GG--C-------CTT-T----CAGCTAGC-------G-------------A-----A-TA-----
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           29093  9 +     77221 ---------------------------TG-------t-------------g-----a-ta-a--a
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                             794 24 -     27784 tg--gga-a-T-T---T----CACTGAAG-------G-------------A-----A-TA-G--T
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        241200 24 -    344369 GA--AGA-A-T-T---T----CCACTAGT-------C-------------A-----A-TA-A--T
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13242898 35 -  17261082 TG--GGA-A-T-T---T----CAGCTAAG-------AATTA--CGTATGGA-----A-TA-A--T
i Pteropus_alecto.KB031157.1                            I 2 C 0
s Pteropus_vampyrus.KN525959.1                             600852 35 -   3946241 TG--GGA-A-T-T---T----CAGCTAAG-------AATTACAT--ATGGA-----A-TA-A--T
i Pteropus_vampyrus.KN525959.1                          I 2 C 0
s Puma_concolor.QAVW01000427.1                          131530630 24 - 161321710 TA--GGA-A-T-T---T----CAGCTAAG-------G-------------A-----A-TA-A--T
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             25660 22 +     56732 GG--A-------CTT-T----CCACTAGG-------A-------------A-----A-TA-A--T
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6802150 22 +   6970761 GG--A-------CTT-T----CCACTAGG-------A-------------A-----A-TA-A--T
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             1542 22 +     18040 GG--A-------CTT-T----CCACTAGG-------A-------------A-----A-TA-A--T
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                12743 24 +     68503 TG--GAA-A-T-T---T----CAACTAGG-------G-------------A-----A-TC-A--T
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13911038 11 +  90463843 ---------------------------at-------t-------------g-----a-ta-aaaa
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1784500 33 +   2252614 TG--GGA-A-T-T---G----CAGCTAGg-------a---a-atgtatgaa-----a-ta-a--t
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           12097 22 -     14454 GG--A-------CTT-T----CCACTAGG-------A-------------A-----A-TA-A--T
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206373423 22 - 206558726 GG--A-------CTT-T----CCACTAGG-------A-------------A-----A-TA-A--T
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44851071 22 -  45163003 GG--A-------CTT-T----CCACTAGG-------A-------------A-----A-TA-A--T
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                16201 35 +    109198 TG--GGA-A-T-T---T----CAGCTAAG-------AATTA--CGTATGGA-----A-TA-A--T
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            I 2 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       4390 24 +     12214 TG--GAA-A-T-T---T----CAGCTAGG-------G-------------A-----A-TC-A--T
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15668863 22 -  43202129 GG--A-------CTT-T----CAGCTAGG-------A-------------A-----A-TA-A--T
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                         738 22 +     34089 GG--A-------CTT-T----CAGCTAGG-------A-------------A-----A-TA-A--T
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                               669 22 -     60842 GG--A-------CTT-T----CAGCTAGG-------A-------------A-----A-TA-A--T
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                               738 22 +     67014 GG--A-------CTT-T----CAGCTAGG-------A-------------A-----A-TA-A--T
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                               738 22 +     60816 GG--A-------CTT-T----CAGCTAGG-------A-------------A-----A-TA-A--T
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                  666 22 -     76454 GG--A-------CTT-T----CAGCTAGG-------A-------------A-----A-TA-A--T
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17337246 22 -  30362882 GG--A-------CTT-T----CAGCTAGG-------A-------------A-----A-TA-A--T
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         16847 22 -     62485 GG--A-------CTT-T----CAGCTAGG-------A-------------A-----A-TA-A--T
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   28290 23 -    114521 TG--G-A-ACT-T---T----TAGTGAGA-------G-------------A-----ATCA-----
i Scalopus_aquaticus.ScaAqu_scaffold_9300               I 7 I 1
s Semnopithecus_entellus.k141_1527475                       24085 22 +     26421 GG--A-------CTT-T----CCACTAGG-------A-------------A-----A-TA-A--T
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       4547 22 +     20762 GG--A-------CTT-T----CCACTAGG-------A-------------A-----A-TA-A--T
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         38280 22 +     40653 GG--A-------CTT-T----CCACTAGG-------A-------------A-----A-TA-A--T
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                            8839 22 -     12194 GG--A-------CTT-T----CCACTAGG-------A-------------A-----A-TA-A--T
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     22258 22 -     27512 GG--A-------CTT-T----CCACTAGG-------A-------------A-----A-TA-A--T
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         31279 22 -     33692 GG--A-------CTT-T----CCACTAGG-------A-------------A-----A-TA-A--T
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   94323  9 -    120886 ---------------------------AG-------G-------------G-----A-TA-A--A
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            14511 22 +    739146 TG--AGA-A-T-T---T----CAGTTAGG-------G-------------A-----A-TA-----
i Solenodon_paradoxus.SolPar_flattened_line_1012        I 2 I 1
s Spermophilus_dauricus.KZ294190.1                        2236175  9 +   2842873 ---------------------------TG-------g-------------g-----a-ta-a--t
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             230916 24 -    276980 TA--AGA-A-T-T---T----TGGCTAGT-------C-------------A-----A-TA-A--T
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Sus_scrofa.CM000824.4                                 189268803 24 + 218635234 TG--GAA-A-T-A---T----CAGCTAGG-------A-------------A-----A-TA-A--T
i Sus_scrofa.CM000824.4                                 I 1 C 0
s Symphalangus_syndactylus.tarseq_24                        11197 22 -  13920577 GG--A-------CTT-T----CAGCTAGG-------A-------------A-----A-TA-A--T
i Symphalangus_syndactylus.tarseq_24                    C 0 I 73
s Tadarida_brasiliensis.TadBra_scaffold_145589               2722 23 -      6213 TG--GGG-A-T-T---T----CAGCT-GG-------G-------------A-----A-TA-C--T
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               11671 18 +     45698 ------------T---T----CAGCTAGG-------G-------------A-----A-AATC--C
i Tamandua_tetradactyla.TamTet_scaffold_26877           I 4 C 0
s Tapirus_indicus.TapInd_scaffold_176                      803661 24 +   1148477 TG--GAA-A-T-C---T----CAGCAAGA-------C-------------A-----A-TA-A--T
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  54320 24 +     99546 TG--GAA-A-T-C---T----CAGCAAGA-------C-------------A-----A-TA-A--T
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               22988 24 +     42269 GGGTA-------CTT-T----CAGGTAGG-------A-------------A-----G-TA-A--A
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               56296 24 +     65473 GGGTA-------CTT-G----CAGGTAGG-------A-------------A-----G-TA-A--A
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194003579 22 - 194193292 GG--A-------CTT-T----CCGCTAGG-------A-------------A-----A-TA-A--T
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                   537 17 +      6782 ------------T---T----CAACTAGG-------G-------------A-----A-AA-A--C
i Tolypeutes_matacus.TolMat_scaffold_269431             I 4 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  132797 23 -    259118 CG--GGA-A-T-T---T----CAGCT-GG-------G-------------A-----A-TA-A--T
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        22657 22 +     38948 GG--A-------CTT-T----CCACTAGG-------A-------------A-----A-TA-A--T
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   16384 22 -     32910 GG--A-------CTT-T----CCACTAGG-------A-------------A-----A-TA-A--T
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       22282 22 +     24652 GG--A-------CTT-T----CCACTAGG-------A-------------A-----A-TA-A--T
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      1167 22 -      3559 GG--A-------CTT-T----CCACTAGG-------A-------------A-----A-TA-A--T
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           39106 22 -     54611 GG--A-------CTT-T----CCATTAGG-------A-------------A-----A-TA-A--T
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       15105 22 +     17312 GG--A-------CTT-T----CCACTAGG-------A-------------A-----A-TA-A--T
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    22475 22 -     25040 GG--A-------CTT-T----CCACTAGG-------A-------------A-----A-TA-A--T
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          1141 22 +      3528 GG--A-------CTT-T----CCACTAGG-------A-------------A-----A-TA-A--T
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  47503 22 +     51589 GG--A-------CTT-T----CCACTAGG-------A-------------A-----A-TA-A--T
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       10671 22 +     14732 GG--A-------CTT-T----CCACTAGG-------A-------------A-----A-TA-A--T
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       1149 22 -     28054 GG--A-------CTT-T----CCACTAGG-------A-------------A-----A-TA-A--T
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44655944 22 -  44834318 GG--A-------CTT-T----CCACTAGG-------A-------------A-----A-TA-A--T
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                         954 22 +      3372 GG--A-------CTT-T----CCACTAGG-------A-------------A-----A-TA-A--T
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   2150 24 +     90398 TG--GAA-A-T-T---T----CAGATACA-------G-------------A-----A-TC-A--T
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16078256 11 +  31416278 ------------T---G----CAGCTAGG-------G----------------------------
i Trichechus_manatus.JH594618.1                         I 4 I 5
s Tupaia_chinensis.KB320831.1                             2787276 21 -   3938065 AG--A-------C---T----CAGCTAGG------AA-------------A-----G-TA-A--T
i Tupaia_chinensis.KB320831.1                           I 2 C 0
s Tupaia_tana.TupTan_flattened_line_3657864                   247 21 +       342 AG--A-------C---T----CAGCTAGG------AA-------------A-----G-TA-A--T
i Tupaia_tana.TupTan_flattened_line_3657864             I 2 C 0
s Tursiops_truncatus.MRVK01000923.1                      69310268 24 -  96451834 TG--GAA-A-C-T---T----CAGCTAGG-------A-------------A-----A-TC-A--t
i Tursiops_truncatus.MRVK01000923.1                     I 3 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 23478 23 -     25548 TG--GGA-C-T-T---T----AGTCCCAA-------A-------------A-----ACCA-----
i Uropsilus_gracilis.UroGra_scaffold_4143_0             I 7 I 1
s Ursus_maritimus.KK498671.1                              6510898 24 +  28682327 TA--AGA-A-T-T---T----CGGCTAGT-------C-------------A-----A-TA-A--T
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  1814 20 -     20643 GG--C-------CCT-T----CGGCTAGC-------G-------------A-----A-TA-----
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             21359 20 -     33872 GG--C-------CCT-T----CGGCTAGC-------G-------------A-----A-TA-----
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1521581 24 -   2331223 TG--GAA-A-T-T---T----CAGCTAAG-------G-------------A-----G-TA-A--T
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                134051 24 -    281493 TA--AGA-A-T-T---T----TGGCTAGT-------C-------------A-----A-TT-A--T
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       123374  9 -    134049 ---------------------------TG-------G-------------G-----A-TA-A--C
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        210596  4 -    227762 ----------------------------------------------------------TA-A--T
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     12229  9 -     20485 ---------------------------GG-------T-------------G-----A-TA-A--A
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 I 4
s Ziphius_cavirostris.ZipCav_flattened_line_127025           3771 24 -      8775 TG--GAA-A-T-T---T----CAGCTAGG-------G-------------A-----A-TC-A--T
i Ziphius_cavirostris.ZipCav_flattened_line_127025      I 3 C 0
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16291  1 -    119109 I
e Hylobates_pileatus_b.LG03                                     92553610  0 - 189753342 C
e Otolemur_garnettii.GL873528.1                          18004869 68 -  38779656 I
e Otolemur_crassicaudatus.k141_321880                       35431 68 +     38679 I
e Galagoides_demidoff.k141_1769638                           6763 68 +     27357 I
e Galago_senegalensis.k141_964197                            9743 68 -     43889 I
e Galago_moholi.ctg555                                     207363 68 -    847004 I
e Dolichotis_patagonum.DolPat_scaffold_14102                33375  0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             56104 16 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                14631 16 +     26546 I
e Cricetulus_griseus.LT883672.1                          53025429  0 +  72327488 C
e Cavia_tschudii.CavTsc_scaffold_488                       173989  0 +    436027 C
e Cavia_porcellus.DS562889.1                             15795798  0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15783848 16 -  24422027 I
e Castor_canadensis.CasCan_scaffold_47037                   27015  0 +     33760 C

a score=0.000000
s hg38.chr4_GL000008v2_random                                8216 25 +    209709 ATG-------------T-T-CTGA---GTCTT----GATT-AT-CTC-AA
s Acinonyx_jubatus.LLWD01000356.1                         2030314 24 +   3721120 GTA-------------G-T-TCTG---GTCTT----AGAC-AT--TG-AA
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    108581 32 -    189883 ATA-AT-G-TTA--TAT-T-CTGG---GTCTT----AGGT-AT-GC--AA
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10653647 25 +  23371972 GTA-------------G-T-CGTG---GTCTC----GGTT-AT-GGG-AA
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7090149 25 -  16596857 GTA-------------G-T-CCTG---GTGTT----GAGT-AT-CTG-AA
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                    8870 12 -     22067 -------------------------------T----ACAT-AT-CTA-AA
i Allactaga_bullata.AllBul_scaffold_70162               I 4 C 0
s Allenopithecus_nigroviridis.k141_3103707                  59239 25 +     61638 ATG-------------T-T-CTGA---GTCTT----GGGC-AT-CTC-AA
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        51047 25 +     53391 ATG-------------C-T-CTGA---GTCTC----GGGC-AT-CTC-AA
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         1771 25 +     72529 ATG-------------C-T-CTGA---GTCTC----GGGC-AT-CTC-AA
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          1347 25 +      3797 ATG-------------C-T-CTGA---GTCTC----GGGC-AT-CTC-AA
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             6441 25 -     18050 ATA-------------T-T-CTGA---GTCTT----GGGT-AT-CTC-AA
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  7558 25 -     11521 ATA-------------T-T-CCGA---GCTTT----GGGT-AT-CTC-AA
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              7116 25 -     21359 ATA-------------T-T-CTGA---GTCTT----GGGT-AT-CTC-AA
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1856473                                5499 25 +      7227 ATA-------------T-T-CTGA---GTCTT----GGGT-AT-CTC-AA
i Alouatta_juara.k141_1856473                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          6414 25 -     10438 ACA-------------T-T-CCGA---GTCTT----GGGT-AT-CTC-AA
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            3068 25 +      7047 ACA-------------T-T-CCGA---GTCTT----GGGT-AT-CTC-AA
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             6352 25 +     10410 ATA-------------T-T-CTGA---GTCTT----GGGT-AT-CTC-AA
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1374428                             155 25 -     25526 ATA-------------T-T-CTGA---GTCTT----GGGT-AT-CTC-AA
i Alouatta_puruensis.k141_1374428                       C 0 C 0
s Alouatta_seniculus.k141_990213                             3073 25 +      6429 ATA-------------T-T-CTGA---GTCTT----GGGT-AT-CTC-AA
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3516813 25 +   4113121 ATA-------------T-T-CCCG---GTCTT----AGGG-TT-CTG-AA
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      387271 25 -    631301 ATA-------------T-T-CCTG---GTGTT----GGGT-AT-CTG-AA
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            27718 28 +     33004 GTA-------------T-T-CCTGGTGGTCTT----AGGG-TT-CTG-AA
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 58746 25 +     78111 ATA-------------T-T-CTGA---GTCTT----GGGT-AT-CTC-AA
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            1677 25 +     22701 ATA-------------T-T-CTGA---GTCTT----GGGT-AT-CTC-AA
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5745637 25 +   9889416 ATA-------------T-T-CTGA---GTCTT----GGGT-AT-CTC-AA
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             2229 25 -    104377 ATA-------------T-T-CTGA---GTCTT----GGGT-AT-CTC-AA
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               2229 25 +     23246 ATA-------------T-T-CTGA---GTCTT----GGGT-AT-CTC-AA
i Aotus_vociferans.k141_718647                          C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 5370 25 -     29036 ATA-------------T-T-TCTG---GTGTT----GGGT-AT-CTG-AA
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9535491 25 +  39197703 ATA-------------T-T-CTGA---GTCTT----GGGT-AT-CTC-AA
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             56779 25 +     85812 ATA-------------T-T-CTAA---GTCTT----GGGT-AT-CTC-AA
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 7776 25 +     89302 ATA-------------T-T-CTAA---GTCTT----GGGT-AT-CTC-AA
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             12285 25 -     58268 ATA-------------T-T-CTGA---GTCTT----GGGT-AT-CTC-AA
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             60273 25 +    119057 ATA-------------T-T-CTAA---GTCTT----GGGT-AT-CTC-AA
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               2223 25 -     25888 ATA-------------T-T-CTAA---GTCTT----GGGT-AT-CTC-AA
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 3081 22 -     16375 ----------------T-T-CTAG---GTCTT----GAGT-AT-CCA-AA
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_767228                               9053 22 -      9688 ----------------T-T-CTAG---GTCTT----GAGT-AT-CCA-AA
i Avahi_peyrierasi.k141_767228                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26377017 25 +  51448160 gta-------------t-t-cctg---atctt----agga-at-CTG-AA
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        2248 25 -     13118 gta-------------t-t-cctg---atctt----agga-at-CTG-AA
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   39913 25 -     72089 GTG-------------T-T-CCTG---GCCTT----AGGG-TT-CTG-AA
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6556335 25 +   6870073 GCA-------------T-T-CCTG---GTCTT----AGGG-TT-CTG-AA
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138136566 25 - 161108492 GCA-------------T-T-CCTG---GTCTT----AGGG-TT-CTG-AA
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     568944 25 -    998990 ACA-------------T-T-CCTG---GTCTT----AGGG-TT-CTG-AA
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136292299 25 - 158972876 GCA-------------T-T-CCTG---GTCTT----AGGG-TT-CTG-AA
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1227920 25 -   1914593 GCA-------------T-T-CCTG---GTCTT----AGGG-TT-CTG-AA
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               110148 25 -    171031 ATA-------------T-T-CTGA---GTCTT----GTGT-AT-CTC-AA
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                  9174 25 +    125063 ATA-------------T-T-CTGA---GTCTT----GTGT-AT-CTC-AA
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                11222 25 -    216513 ATA-------------T-T-CTGA---GTCTT----GTGT-AT-CTC-AA
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        3761 25 -    134917 ATA-------------T-T-CTGA---GTCTT----GTGT-AT-CTC-AA
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3216052 26 -   8989139 GTA-------------T-TTCCTG---TTCTC----AGGG-AT-CTG-AA
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           394239 26 -  15254737 GTA-------------T-TTCCTG---TTCTC----AGGG-AT-CTG-AA
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2969973 26 +   6889770 GTA-------------T-TTCCTG---TTCTC----AGGG-AT-CTG-AA
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11515035 25 +  39901454 CTA-------------G-T-ACTG---GTCTT----GGGT-AT-CTG-AA
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   10052 25 +     87036 CTA-------------G-T-ACTG---GTCTT----GGGT-AT-CTG-AA
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11261694 25 -  35597290 CTA-------------G-T-ACTG---GTCTT----GGGT-AT-CTG-AA
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11084223 25 +  39895921 CTA-------------G-T-ACTG---GTCTT----GGGT-AT-CTG-AA
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16451257 25 -  44759192 CTA-------------G-T-ACTG---GTCTT----GGGT-AT-CTG-AA
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21321920 25 + 157394656 GTA-------------T-T-CCCG---GTCTT----AGGG-TT-CTG-AA
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135703147 25 - 157403528 GTA-------------T-T-CCCG---GTCTT----AGGG-TT-CTG-AA
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_647363                   763 13 +      1887 ---------------------GAA---GCTTT----GGA--AT-------
i Capromys_pilorides.CapPil_scaffold_647363             I 4 I 8
s Carlito_syrichta.NW_007248099.1                          305524 22 +    345090 ATA-------------T-T-CTAG---ATCT-------TT-AT-CTA-AA
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               56451 25 +     67245 ATA-------------T-T-CCTG---GTGTT----GGGT-AT-CTG-AA
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   27015  9 +     33760 ----------------------------CACT----CAAC-A--------
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   155765 25 -    276539 GTA-------------T-T-CCTG---CTTCT----ATGG-AT-CTG-AA
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18886959 25 -  29618158 AAA-------------T-T-CTGA---GTCTT----GGGT-AT-CTC-AA
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 4505 25 -     26817 AAA-------------T-T-CTGA---GTCTT----GGGT-AT-CTC-AA
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                 8745 25 +     25043 AAA-------------T-T-CTGA---GTCTT----GGGT-AT-CTC-AA
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         4560 22 +     21754 ATA-------------T-T-CTAG---ATCT-------TT-AT-CTA-AA
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4359580 25 +   7569818 ATA-------------T-T-CCTG---GTCTT----GGGT-AT-CTG-AA
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_305802         1222 25 +      1857 ATA-------------T-T-CCTG---GTCTT----GGGT-AT-CTG-AA
i Ceratotherium_simum_cottoni.CerCot_scaffold_305802    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6551035 25 +   6739814 ATG-------------T-T-CTGA---GTCTT----GGGC-AT-CTC-AA
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      52512 25 -     54931 ATG-------------T-T-CTGA---GTCTT----GGGC-AT-CTC-AA
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         17496 25 -     19697 ATG-------------T-T-CTAA---GTCTT----GGGC-AT-CTC-AA
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         55027 25 -    107033 ATG-------------T-T-CTGA---GTCTT----GGGC-AT-CTC-AA
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        1470 25 -      3853 ATG-------------T-T-CTGA---GTCTC----GGGC-AC-CTC-AA
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          25402 25 +     30494 ATG-------------T-T-CTGA---GTCTC----GGGC-AC-CTC-AA
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           1425 25 -      4022 ATG-------------T-T-CTGA---GTCTC----GGGC-AC-CTC-AA
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          1317 25 -      3505 ATG-------------T-T-CTGA---GTCTT----GGGC-AT-CTC-AA
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           20126 25 +     35983 ATG-------------T-T-CTGA---GTCTT----GGGC-GT-GTC-AA
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11985904 19 +  12117833 --------------------caga---ggatg----gag--gc-cag-ag
i Cercopithecus_albogularis.ctg51                             I 2 C 0
s Cercopithecus_mona.ctg12                               46473398 25 +  46592721 ATG-------------T-T-CTGA---GTCTT----GGGC-AT-CTC-AA
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      31225 25 +     33420 ATG-------------T-T-CTGA---GTCTT----GGGC-GT-CTC-AA
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        1261 25 -      3443 ATG-------------T-T-CTGA---GTCCC----GGGC-AC-CTC-AA
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      2252 25 -      4669 ATG-------------T-T-CTGA---GTCTC----GGGC-AC-CTC-AA
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        2056 25 -      4411 ATG-------------T-T-CTGA---GTCTT----GGGC-GT-CTC-AA
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         1576 25 -      4205 ATG-------------T-T-CTGA---GTCTC----GGGC-AC-CTC-AA
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           55417 22 -     68416 ----------------T-T-CTAG---GTCTT----GAGT-AT-CCA-AA
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            4466 22 +     13308 ----------------T-T-CTAG---GTCTT----GAGT-AT-CCA-AA
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             1758 25 -     18223 ATA-------------T-T-CTGA---GTCTT----GGGT-AT-CTC-AA
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             18781 25 +     25473 ATA-------------T-T-CTGA---GTCTT----GGGT-AT-CTC-AA
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           37820 25 +     57117 ATA-------------T-T-CTGA---GTCTT----GGGT-AT-CTC-AA
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          42495 25 +     54541 ATA-------------T-T-CTGA---GTCTT----GGGT-AT-CTC-AA
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15957914 14 +  43084221 ---------------------TAG---GCACT----GGAT-AT-------
i Chinchilla_lanigera.JH721867.1                        I 4 I 8
s Chiropotes_israelita.k141_1189915                         67369 25 +    196370 ATA-------------T-T-CTGA---GTCTT----GTGT-AT-CTC-AA
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          11543 25 +     40510 ATA-------------T-T-CTGA---GTCTT----GTGT-AT-CTC-AA
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15134856 25 -  15256731 ATG-------------T-T-CTGA---GTCTC----AGGC-AT-CTC-AA
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      29902 25 -     53260 ATG-------------T-T-CTGA---GTCTC----AGGC-AT-CTC-AA
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101140350 25 + 101219884 ATG-------------T-T-CTGA---GTCTC----AGGC-AT-CTC-AA
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                13451 24 -     21363 TTA-------------T-T-CCAG---GTTAT----GGGC-AT-CC--AA
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 I 1
s Choloepus_hoffmanni.KN194586.1                           758757 24 +    964067 TTA-------------T-T-CCAG---GTTAT----GGGC-AT-CT--AA
i Choloepus_hoffmanni.KN194586.1                        C 0 I 1
s Chrysochloris_asiatica.ChrAsi_scaffold_141308              5533 24 -     12508 TTA-------------T-T-CAA----GTCAT----GAGC-AT-ATG-AA
i Chrysochloris_asiatica.ChrAsi_scaffold_141308         C 0 C 0
s Colobus_angolensis.KN985967.1                          10878932 25 +  10971483 ACG-------------T-T-CTGA---GTCTT----GGGC-AT-CTC-AA
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147660091 25 + 156195979 ACG-------------T-T-CTGA---GTCTT----GGGC-AT-CTC-AA
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            12076 25 +     23629 ACG-------------T-T-CTGA---GTCTT----GGGC-AT-CTC-AA
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60609733 21 +  78930452 GCA-------------G-T-CCTG---AC--T----GGGT-A--CTG-A-
i Condylura_cristata.JH655880.1                         I 1 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         35850 25 -     40477 GAA-------------T-T-CCTG---GTCTT----GCAT-GT-CTT-AC
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 274020 31 -    399297 ATA-AT-G--TA----C-T-CTGG---GTATT----GGGG-ATACTG-AA
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             15667 24 -     19186 ATA-------------T-T-TCTG---AT-AA----GAAT-AA-CTC-AA
i Crocidura_indochinensis.CroInd_scaffold_38409         I 1 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            48341 25 -     70449 GTA-------------G-T-TCTG---GTCTT----GGAT-AT-CGG-AA
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  204737 32 -    956709 ATATATTG-G-A----G-T-CTAA---GTCTT----AGAT-AT-TTA-AA
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 26924 14 -     67205 ---------------------AAG---GCTTT----GGAT-AT-------
i Ctenomys_sociabilis.CteSoc_scaffold_19489             I 4 I 8
s Dasypus_novemcinctus.JH568778.1                          178629 25 -   6883506 TTA-------------T-T-ATGG---ATAAT----GGTC-AT-CTA-AA
i Dasypus_novemcinctus.JH568778.1                       C 0 I 1
s Daubentonia_madagascariensis.ctg11                     16841291 22 +  31942871 ----------------T-T-CTAG---GTGTT----GAGT-AT-CTG-AA
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80033756 25 -  96802777 gta-------------t-t-cctg---atctt----agga-at-CTG-AA
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18695758 25 -  18957592 ATA-------------T-T-CCTG---GTGTT----GGGT-GT-CTG-AA
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 318888 25 +    993696 ATA-------------T-T-CCTG---GTCTT----GGGT-AT-CTG-AA
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_24487                 61043 25 +     62380 ATA-------------T-T-CCTG---GTCTT----AGGT-AT-CTG-AA
i Diceros_bicornis.DicBicMic_scaffold_24487             C 0 C 0
s Echinops_telfairi.JH980316.1                           22990796 13 -  44670279 ------------------------------AT----GAGC-AT-GTG-AA
i Echinops_telfairi.JH980316.1                          I 8 C 0
s Eidolon_helvum.KE772537.1                                  9140 25 +     24177 GTA-------------T-T-CCTG---GTTTG----GGGc-at-ttg-aa
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1488458 25 +   1727528 GTA-------------T-C-CCTG---GTCTT----AGGA-TT-CTG-AA
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7803181 25 +  15467074 TTA-------------T-T-CTAG---GTCAT----CGAC-AT-CTA-AA
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        235666 33 -    369425 ATA-AT-G-TTAC--AT-T-CTTG---GTCTT----GGAT-AT-CTA-AT
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           2676 33 -      7838 ATA-AT-G-TTA--TAT-T-CTTG---GTCTT----GGAT-AT-CTA-AT
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85866956 25 +  99434291 GCA-------------G-T-CCTC---CCCTT----GAGT-AT-CTG-AA
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Equus_asinus.JREZ01000137.1                             2952148 25 -   4388051 GTA-------------T-T-CCAG---GTCTT----GGGT-AT-CTG-AA
i Equus_asinus.JREZ01000137.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13346159 25 +  41866177 GTA-------------T-T-CCAG---GTCTT----GGGT-AT-CTG-AA
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                           8151 25 +     92910 GTA-------------T-T-CCAG---GTCTT----GGGT-AT-CTG-AA
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erythrocebus_patas.Contig8                             48767035 25 -  48907691 ATG-------------T-T-CTGA---GTCTC----AGGC-AT-CTC-AA
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          311901 25 +    330699 GTA-------------T-T-CCTG---ATCTT----AGGA-AT-CTG-AA
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             58330 25 +     89355 GTA-------------T-T-CCTG---ATCTT----AGGA-AT-CTG-AA
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              1488 22 +     13586 ----------------T-T-CTAG---GTCTT----GAGC-AT-CCA-AA
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               1425 22 -      6809 ----------------T-T-CTAG---GTCTT----GAGC-AT-CCA-AA
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             7895 22 +     36558 ----------------T-T-CTAG---GTCTT----GAGC-AT-CCA-AA
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             4212 22 +     60246 ----------------T-T-CTAG---GTCTT----GAGC-AT-CCA-AA
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 7700 22 +    109717 ----------------T-T-CTAG---GTCTT----GAGC-AT-CCA-AA
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               12074 22 +     16540 ----------------T-T-CTAG---GTCTT----GAGC-AT-CCA-AA
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                12351 22 +     27497 ----------------T-T-CTAG---GTCTT----GAGC-AT-CCA-AA
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           14807 22 +     26808 ----------------T-T-CTAG---GTCTT----GAGC-AT-CCA-AA
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                29541 22 +     46535 ----------------T-T-CTAG---GTCTT----GAGC-AT-CCA-AA
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              12264 22 -     29447 ----------------T-T-CTAG---GTCTT----GAGC-AT-CCA-AA
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129889294 24 - 159252932 GTA-------------G-T-TCTG---GTCTT----AGAT-AT--TG-AA
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129276368 24 - 158578461 GTA-------------G-T-TCTG---GTCTT----AGAT-AT--TG-AA
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 17503 24 +     52776 GTA-------------G-T-TCTG---GTCTT----AGAT-AT--TG-AA
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13889500 14 -  19261668 ---------------------TAT---Acctt----gtat-at-------
i Fukomys_damarensis.KN123630.1                         I 18 C 0
s Galago_moholi.ctg555                                     207431 25 -    847004 tga-------------t-t-ctaa---atctt----gcat-at-ctg-aa
i Galago_moholi.ctg555                                  I 68 C 0
s Galago_senegalensis.k141_964197                            9811 25 -     43889 tga-------------t-t-ctaa---atctt----gtat-at-ctg-aa
i Galago_senegalensis.k141_964197                       I 68 C 0
s Galagoides_demidoff.k141_1769638                           6831 25 +     27357 ccg-------------t-t-ctag---atctt----gtat-at-ctg-aa
i Galagoides_demidoff.k141_1769638                      I 68 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               152746 25 +    324696 ATA-------------T-T-TTAG---GTCTT----GGGT-AT-CTG-GA
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    177971 25 -    189561 GTA-------------T-T-CCCG---GTCTT----AGGG-TT-CTG-AA
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                            9168 19 -     18683 ---------------------TAT---GTATT----GGTC-AT-CTA-AA
i Glis_glis.GliGli_scaffold_79770                       I 13 C 0
s Gorilla_beringei.k141_111300                               1609 25 -     14630 ATG-------------T-T-CTGA---GTCTT----GGGT-AT-CTC-AA
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119648707 25 - 195582420 ATG-------------T-T-CTGA---GTCTT----GGGT-AT-CTC-AA
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   73727 19 +    118900 ---------------------TAG---GTCTT----GGTT-TT-CTA-AA
i Graphiurus_murinus.GraMur_scaffold_4493               I 8 C 0
s Hapalemur_alaotrensis.k141_1198205                         2035 22 +      3980 ----------------T-T-CTAG---GTCTT----GAAT-AT-CCA-AA
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             24515 22 +     26611 ----------------T-T-CTAG---GTCTT----GAAT-AT-CCA-AA
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             1969 22 +     56096 ----------------T-T-CTAG---GTCTT----GAAT-AT-CCA-AA
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        25242 22 -     42470 ----------------T-T-CTAG---GTCTT----GAAT-AT-CCA-AA
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        41839 22 -     54384 ----------------T-T-CTAG---GTCTT----GAAT-AT-CCA-AA
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              13265 25 +     53719 ATA-------------G-T-TCTG---GTCTT----GGAT-AT-CGG-AA
i Helogale_parvula.HelPar_flattened_line_22962          C 0 I 279
s Hemitragus_hylocrius.HemHyl_scaffold_16669                24325 25 -     91191 ATA-------------T-T-CCCG---GTCTT----AGGG-TT-CTG-AA
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2547609 14 +  31725842 ---------------------TAT---Gcctt----gtat-at-------
i Heterocephalus_glaber.JH602058.1                      I 18 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               53017 24 +     73687 TTA-------------T-T-CCAG---GT-GT----GGGT-AT-CAG-AA
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              144026 25 +    277961 GTA-------------T-T-CATG---ATCTT----GGGG-AT-CTG-GA
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      275450 25 -    477199 ATA-------------T-T-CCTG---GTCTT----GGGT-GT-CTG-AA
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              4605 25 -      9143 ATA-------------T-T-CCTG---GTCTT----GGGT-AT-CTG-AA
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg2144                                      41 26 -      8057 ATG-------------T-T-CTGG---GTCTT----GGATTGT-CTC-AA
i Hoolock_leuconedys.ctg2144                               n 25 n 25
s Hyaena_hyaena.HyaHya_flattened_line_20729                 12612 25 -     67322 GTA-------------G-T-TCTG---GTCTT----GGAT-AT-CGG-AA
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hylobates_abbotti.k141_493872                              1418 25 +      5897 ATG-------------T-T-CTGA---GTCTT----GGTT-GT-CTC-AA
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_282275                                631 25 +      1846 ATG-------------T-T-CTGA---GTCTT----GGTT-GT-CTC-AA
i Hylobates_agilis.k141_282275                          C 0 C 0
s Hylobates_klossii.k141_466549                              7876 25 +     11537 ATG-------------T-T-CTGA---GTCTT----GGTT-GT-CTC-AA
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_muelleri.k141_1133650                             853 25 -      2775 ATG-------------T-T-CTGA---GTCTT----GGTT-GT-CTC-AA
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             29455 17 -     60944 ATG-------------T-T-CTGA---GTCTT----GGG-----------
i Hylobates_pileatus_a.tarseq_592                         C 0 I 8
s Hystrix_cristata.HysCri_scaffold_50788                     2576 32 +     22540 ACA-CTATATGTTATAG-T-CTAG---GCCTT----GGAT-AC-------
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7122258 32 +  13083262 aca------tattatat-t-ttgg---GTCTT----GGAT-AT-CTA-AA
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_3334527                                   8479 22 +      9207 ----------------T-T-CTAG---GTCTT----GAGT-AT-CCA-AA
i Indri_indri.k141_3334527                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               5686 22 +     17520 ----------------T-T-GCTG---ATCTT----AGGA-AT-CTG-AA
i Inia_geoffrensis.IniGeo_flattened_line_66725          I 3 C 0
s Jaculus_jaculus.JH725517.1                              8561832 12 +  11848649 -------------------------------T----ACAT-AT-CTA-AA
i Jaculus_jaculus.JH725517.1                            I 4 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               20515 25 +     37189 GTA-------------T-T-CCTG---ATCTT----AGGA-AT-CTG-AA
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          46334 25 -    147782 ATA-------------T-T-CTGA---GTCTT----GGGT-AT-CTC-AA
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   110634 25 -    115756 TTA-------------T-T-CCTG---GTCCT----TGGT-GT-CTG-AA
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258403518 22 - 285822530 ----------------T-T-CTAG---GTCTT----GAAT-AT-CCA-AA
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        20412 22 +     39228 ----------------T-T-CTAG---GCCTT----GAGT-AT-CCA-AA
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            49788 22 +     63517 ----------------T-T-CTAG---GCCTT----GAGT-AT-CCA-AA
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        75008 22 +    116806 ----------------T-T-CTAG---GCCTT----GAGT-AT-CCA-AA
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     28049 22 -     33031 ----------------T-T-CTAG---GCCTT----GAGT-AT-CCA-AA
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3082315 25 -   3498232 GTA-------------G-T-CCTG---GTCTT----GGGT-AT-CTG-AA
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lipotes_vexillifer.KE558548.1                            132862 25 +   3060487 gta-------------t-t-cctg---atctt----agga-at-TTG-AA
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19244121 25 +  19376315 ATG-------------T-T-CTGA---GTCTT----GGGC-AT-CTC-AA
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            7144 25 +     84689 ctg-------------t-t-ctag---atgtt----gtat-at-ctg-aa
i Loris_lydekkerianus.k141_550999                       I 115 C 0
s Loris_tardigradus.ctg97                                 3774902 25 +   6799190 ctg-------------t-t-ctag---atgtt----gtat-at-ctg-aa
i Loris_tardigradus.ctg97                               I 115 C 0
s Loxodonta_africana.GL010040.1                          20587592 25 -  62548349 TAA-------------T-T-CCAG---GTCAT----GGGC-AT-CTG-AA
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11083679 25 +  39895028 CTA-------------G-T-ACTG---GTCTT----GGGT-AA-CTG-AA
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             15807 25 +     74745 ATG-------------T-T-CTGA---GTCTT----GGGC-AT-CTC-AA
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12702313 25 +  12821369 ATG-------------T-T-CTGA---GTCTT----GGGC-AT-CTC-AA
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               4406 25 +      6569 ATG-------------T-T-CTGA---GTCTT----GGGC-AT-CTC-AA
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           42706 25 +     63263 ATG-------------T-T-CTGA---GTCTT----GGGC-AT-CTC-AA
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_1068107                               11283 25 +     12679 ATG-------------T-T-CTGA---GTCTT----GGGC-AT-CTC-AA
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                 856 25 +      3017 ATG-------------T-T-CTGA---GTCTT----GGGC-AT-CTC-AA
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  42468 25 -     79256 ATG-------------T-T-CTGA---GTCTT----GGGC-AT-CTC-AA
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196031388 25 + 196197964 ATG-------------T-T-CTGA---GTCTT----GGGC-AT-CTC-AA
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11441492 25 +  11645122 ATG-------------T-T-CTGA---GTCTT----GGGC-AT-CTC-AA
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   1418 25 -     46448 ATG-------------T-T-CTGA---GTCTT----GGGC-AT-CTC-AA
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                1245 25 -      3617 ATG-------------T-T-CTGA---GTCTT----GGGC-AT-CTC-AA
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 11578 25 -     55006 ATG-------------T-T-CTGA---GTCTT----GGGC-AT-CTC-AA
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43836617 25 +  43892939 ATG-------------T-T-CTGA---GTCTT----GGGC-AT-CTC-AA
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                3840 25 -      5978 ATG-------------T-T-CTGA---GTCTT----GGGC-AT-CTC-AA
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               1420 25 -     27140 ATG-------------T-T-CTGA---GTCTT----GGGC-AT-CTC-AA
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43433281 25 -  43563597 ATG-------------T-T-CTGA---GTCTT----GGGC-AT-CTC-AA
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4446107 25 -   4543643 ATG-------------T-T-CTGA---GTCTT----GGGC-AT-CTC-AA
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            142927 25 +    252755 GTA-------------T-T-CCTG---GTCTT----GGGT-AT-TTG-CA
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             32992 25 +     58827 GTA-------------T-T-CCTG---GTCTT----GGGC-AT-TTG-CA
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36870105 32 +  64221397 aca------tattatat-t-tggG---GTCTT----AGAT-AT-CTA-AA
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       61431 25 -    234502 GTA-------------T-T-CCGC---GTCCT----GGGG-GT-CTG-AG
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_1828            224513 25 -    226874 GCA-------------G-T-CCTC---CTCTT----GAGT-AT-CTG-AA
i Mellivora_capensis.MelCap_flattened_line_1828         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233                8041 32 +     15977 ATA-AT-G-TTA--TAT-T-CTGG---GTCTT----AGAT-AT-GT--AA
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 I 1
s Mesocricetus_auratus.KB708139.1                         1042962 33 -  26018355 ATA-AT-G-TTA--TAT-T-CTTG---GTCTT----AGAT-GT-CTG-AT
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_183284                    554 25 +      2166 ATA-------------T-T-TCTG---ATCTT----AGGA-AT-CTG-AA
i Mesoplodon_bidens.MesBid_scaffold_183284              C 0 C 0
s Microcebus_murinus.CM007691.1                          16506633 22 +  47401472 ----------------T-T-CTAG---GTCTT----GAGT-AT-CCA-AA
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  27745 13 -     48017 ------------------------------AT----AAGC-AT-ATG-AA
i Microgale_talazaci.MicTal_scaffold_34660              I 8 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               19607 25 -     32043 ATA-------------T-T-CCTG---GTGTT----GGGT-AT-CTG-AA
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22815327 15 -  98408828 ATA-AT-G-TTA--TAT-T-CT----------------------------
i Microtus_ochrogaster.CM001673.1                       C 0 I 12
s Miniopterus_natalensis.LDJU01000022.1                   8206347 24 +  10048721 ATA-------------T-C-CCT----GTCTT----GGGG-AT-CTG-AA
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            31024 24 +     45743 ATA-------------T-C-CCT----GTCTT----GGGG-AT-CTC-AA
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        31955 25 +     34273 ATG-------------T-T-CTGA---GTCTC----AGGC-AT-CTC-AA
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         7613 25 -    104932 GTA-------------G-T-CCTG---GTCTT----GGGT-AT-CTG-AA
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     2047 22 +      8497 ----------------T-T-CTAG---GTCTT----GAGT-AT-CCA-AA
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 143281 25 +    154973 GTA-------------T-T-CCTG---ATCTT----AGGA-AT-CTG-AA
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                157928 25 +    265003 ATA-------------T-T-CCTG---GTCTT----GGAT-AT-CTG-AA
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 1556 25 -      4346 ATA-------------T-T-CCTG---GTCCT----AGGG-TT-CTC-AA
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  140961 25 -    168139 ATA-------------G-T-TCTG---GTCTT----GGAT-AT-CGG-AA
i Mungos_mungo.MunMun_flattened_line_8729               C 0 I 273
s Murina_feae.MurFea_scaffold_2254                          16143 24 -    100666 -TA-------------T-T-CCTG---GCCTT----CAAT-AT-CTG-AA
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70761507 33 +  92629107 ATA-AT-GTG-A--TGT-T-CTGG---GTCTT----GGAT-GT-CTT-AT
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75484582 33 +  98207768 ATA-AT-GTG-A--TGT-T-CTGG---GTCTT----GGAT-GT-CTT-Aa
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67549122 33 +  89017189 ATA-AT-GTG-A--TGT-T-CTGG---GTCTT----GGAT-GT-CTT-AA
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74324220 33 +  97876770 ATA-AT-GTG-A--TGT-T-CTGG---GTCTT----GGAT-GT-CTT-AA
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              7046  6 +     98495 ------------------------------------------A-CTA-AA
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 11 C 0
s Mustela_putorius.JH417978.1                             4419366 25 -  28371801 GCA-------------G-T-CCTC---CCCTT----GAGT-AT-CTG-AA
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     86505 14 -    117718 ---------------------GAA---GCTTT----GGAT-AT-------
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 4 I 8
s Myotis_brandtii.KE161952.1                               964473 25 +   8389877 TTA-------------T-T-CCTG---GTCCT----CGAT-AT-CTG-AA
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5016150 25 +   6462685 TTA-------------T-T-CCTG---GTCCT----CGAT-AT-CCG-AA
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3462059 25 -   3747815 TTA-------------T-T-CCTG---GTCCT----CGAT-AT-CTG-AA
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         7256 25 +     66751 TTA-------------T-T-CCTG---GTCCT----TGAT-AT-CTG-AA
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             2011 24 -      8794 TTA-------------T-T-CCAG---GTCAT----GGGC-TT-CA--AA
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            107368 42 +    362372 ATGGATAGAGGACgggg-t-ctaa---gtatgatcaagat-gt-atg-aa
i Nannospalax_galili.KL201303.1                         I 60 C 0
s Nasalis_larvatus.k141_153429                               4320 25 +     48152 ATG-------------T-T-CTGA---GTCTT----GGGC-AT-CTC-AA
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4481214 25 -  14209539 GTA-------------G-T-CCTG---GTCTT----GGGT-AT-CTG-AA
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3947890 25 -   4490290 gta-------------t-t-cctg---atctt----agga-at-CTG-AA
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  46260 25 +     94413 ATA-------------C-T-TCTG---GTCTT----AGAT-AG-CTG-AA
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1223136                          10087 25 -     11253 ATG-------------T-T-CTGA---GTCTT----GGGT-AT-CTC-AA
i Nomascus_annamensis.k141_1223136                      C 0 C 0
s Nomascus_concolor.k141_468488                               730 25 -      1482 ATC-------------T-T-CTGA---GTCTT----GGGT-AT-CTC-AA
i Nomascus_concolor.k141_468488                         C 0 C 0
s Nomascus_gabriellae.k141_906566                             719 25 -      2544 ATG-------------T-T-CTGA---GTCTT----GGGT-AT-CTC-AA
i Nomascus_gabriellae.k141_906566                       n 670 C 0
s Nomascus_siki_b.tarseq_80                             21193 25 -  18771707 ATG-------------T-T-CTGA---GTCTT----GGGT-AT-CTC-AA
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_844529                                   468 25 +      2124 ATG-------------T-T-CTGA---GTCTT----GGGT-AT-CTC-AA
i Nomascus_siki_a.k141_844529                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                26675 25 +   3668941 CTA-------------G-T-ACTG---GTCTT----GGGT-AT-CTG-AA
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65563490 25 -  95554990 ctg-------------t-t-ctag---atgtt----gtat-at-ctG-AA
i Nycticebus_bengalensis.LG16                           I 115 C 0
s Nycticebus_coucang.k141_2051882                             335 25 +      6470 ctg-------------t-t-ctag---atgtt----gtat-at-ctG-AA
i Nycticebus_coucang.k141_2051882                       I 115 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65665857 25 +  89412551 ctg-------------t-t-ctag---atgtt----gtat-at-ctg-AA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     I 115 C 0
s Octodon_degus.JH651621.1                                3675055 14 +  10294119 ---------------------AAG---GCTTT----GGGT-AT-------
i Octodon_degus.JH651621.1                              I 4 I 8
s Odobenus_rosmarus.KB229369.1                             675873 25 -   3126709 GTA-------------G-T-CCTG---GTCTT----GGGT-AT-CTG-AA
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1076681 25 +   1425656 GTA-------------T-C-CCTG---GTCTT----AGGA-TT-CTG-AA
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         33843 25 +     78940 GTA-------------T-T-CCTG---GTCTT----AGGG-TT-CTG-AA
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  121144 33 +    145789 ATA-AT-G-TTA--TAT-T-CTTG---GTCTT----GGAT-AT-CTG-AT
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  33080 33 +     62360 ATA-AT-G-TTA--TAT-T-CTTG---GTGTT----GGAT-AT-CTG-CT
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7221574 25 -   7562323 gta-------------t-t-cctg---atctt----agga-at-CTG-AA
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              39805 25 -     66828 TTC-------------T-T-CTAG---GTCAG----GGGC-AT-CTG-AA
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      304010 25 -    505867 CTA-------------G-T-ACTG---GTCTT----GGGT-AT-CTG-AA
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       35499 25 +     38679 tga-------------t-t-ctaa---atctt----gtat-at-ctg-aa
i Otolemur_crassicaudatus.k141_321880                   I 68 C 0
s Otolemur_garnettii.GL873528.1                          18004937 25 -  38779656 tga-------------t-T-CTAA---ATCTT----GTAT-AT-CTG-AA
i Otolemur_garnettii.GL873528.1                         I 68 C 0
s Ovis_aries.CM001582.2                                 134074127 25 - 275406953 ATA-------------T-T-CCCG---GTCTT----AGGG-TT-CTG-AA
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      75341 25 +    140051 ATA-------------T-T-CCCG---GTCTT----AGGG-TT-CTG-AA
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127570951 25 - 205426864 ATG-------------T-T-CTGA---GTCTT----GGGT-AT-CTC-AA
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120148098 25 - 196562556 ATG-------------T-T-CTGA---GTCTT----GGGT-AT-CTC-AA
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  30457 24 +    295523 GTA-------------G-T-TCTG---GTCTT----AGAT-AT--TG-AA
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3634061 24 +  18214204 GTA-------------G-T-TCTG---GTCTT----AGAT-AT--TG-AA
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5023838 24 -   6340057 GTA-------------G-T-TCTG---GTCTT----AGAT-AT--TG-AA
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1062842 25 -   1292953 GTA-------------T-T-CCTG---GTCTT----AGGG-TT-CTG-AA
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188152066 25 - 188283584 ATG-------------T-T-CTGA---GTCTT----GGGC-AT-CTC-AA
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            48278 25 +     76494 ATG-------------T-T-CTGA---GTCTT----GGGC-AT-CTC-AA
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47509462 25 +  47705337 ATG-------------T-T-CTGA---GTCTT----GGGC-AT-CTC-AA
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 63445 25 -    104429 ATG-------------T-T-CTGA---GTCTT----GGGT-AT-CTC-AA
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  13229 25 -     29451 ATG-------------T-T-CTGA---GTCTT----GGGC-AT-CTC-AA
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                33634 25 +     35859 ATG-------------T-T-CTGA---GTCTT----GGGC-AT-CTC-AA
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    111788 25 -    135482 GTT-------------G-T-TTTG---GTCTT----GGAT-AT-CGG-AA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           1739 25 -     23713 ctg-------------c-t-ctag---gtctt----gtat-at-ctg-aa
i Perodicticus_ibeanus.k141_117958                      I 369 C 0
s Perodicticus_potto.k141_713187                            21036 25 -     27972 ctg-------------c-t-ctag---gtctt----gtat-at-ctg-aa
i Perodicticus_potto.k141_713187                        I 369 C 0
s Peromyscus_maniculatus.KI615518.1                       4946249 33 -   8017169 ATA-AT-G-TTA--TAT-T-CTTG---GTGTT----GGCT-AT-CTG-AT
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            118191 25 -    122454 GTA-------------T-T-CCTG---ATCTT----AGGA-AT-CTG-AA
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           1321 25 -      3310 ACG-------------T-T-CTGA---GTCTT----GGGC-AT-CTC-AA
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       21227 25 -     82327 ACG-------------T-T-CTGA---GTCTT----GGGC-AT-CTC-AA
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           17978 25 +     19957 ACG-------------T-T-CTGA---GTCTT----GGGC-AT-CTC-AA
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26735987 25 +  26888534 ACG-------------T-T-CTGA---GTCTT----GGGC-AT-CTC-AA
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            93249 25 +    112873 TTA-------------T-T-CCTG---GTTCT----AAGT-AT-CTG-AA
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             39861 25 -     61926 ATA-------------T-T-CTGA---GTCTT----AGGT-AT-CTC-AA
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        21290 25 +     78826 ATA-------------T-T-CTGA---GTCTT----AGGT-AT-CTC-AA
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              5241 25 -     15800 ATA-------------T-T-CTGA---GTCTT----AGGT-AT-CTC-AA
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                         8439 25 -     16101 ATA-------------T-T-CTGA---GTCTT----AGGT-AT-CTC-AA
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          1748 25 +      9673 ATA-------------T-T-CTGA---GTCTT----AGGT-AT-CTC-AA
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13470742 25 -  19735023 ATA-------------T-T-CTGA---GTCTT----AGGT-AT-CTC-AA
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                            9650 25 -     31692 ATA-------------T-T-CTGA---GTCTT----AGGT-AT-CTC-AA
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           2258 25 +     21690 GTA-------------T-T-CCTG---ATCTT----AGGA-AT-CCG-AA
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       19014 25 +     44506 ATA-------------T-T-CTGA---GTCTT----GGGT-AT-CGC-AA
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        19232 25 +     67491 ATA-------------T-T-CTGA---GTCTT----GGGT-AT-CTC-AA
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                       9477 25 -     98129 ATA-------------T-T-CTGA---GTCTT----GGGT-AT-CTC-AA
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     19077 25 +    147771 ATA-------------T-T-CTGA---GTCTT----GGGT-AT-CTC-AA
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        19328 25 -     23762 ATA-------------T-T-CTGA---GTCTT----GGGT-AT-CTC-AA
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_2078842                         19276 25 -     19696 ATA-------------T-T-CTGA---GTCTT----GGGT-AT-CTC-AA
i Plecturocebus_dubius.k141_2078842                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         19150 25 +    152463 ATA-------------T-T-CTGA---GTCTT----GGGT-AT-CGC-AA
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      5907 25 +      8943 ATA-------------T-T-CTGA---GTCTT----GGGT-AT-CTC-AA
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                          8867 25 +    134592 ATA-------------T-T-CTGA---GTCTT----GGGT-AT-CTC-AA
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          19460 25 -     75465 ATA-------------T-T-CTGA---GTCTT----GGGT-AT-CGC-AA
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              183504 25 -    373494 ATG-------------T-T-CTGA---GTCTT----GGGT-GT-CTC-AA
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19803408 25 +  19899266 ATG-------------T-T-CTGA---GTCTT----GGGT-GT-CTC-AA
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               1557 25 -     15069 ATG-------------T-T-CTGA---GTCTT----GGGC-AT-CTC-AA
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              1691 25 +     14865 ATG-------------T-T-CTGA---GTCTT----GGGC-AT-CTC-AA
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                72881 24 +     78963 TTA-------------T-T-CCAG---GT-GT----GGGT-AT-CAG-AA
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6844891 22 +  12164890 ----------------T-T-CTAG---GTGTT----GAAT-AT-CCA-AA
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     13326 22 -     30946 ----------------T-T-CTAG---GTCTT----GAGT-AT-CCA-AA
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_diadema.k141_577245                           39361 22 +     52369 ----------------T-T-CTAG---GTTTT----GAGT-AT-CCA-AA
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         31750 22 -     44753 ----------------T-T-CTAG---GTTTT----GAGT-AT-CCA-AA
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            13672 22 +     27322 ----------------T-T-CTAG---GTTTT----GAGT-AT-CCA-AA
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       13316 22 -     53241 ----------------T-T-CTAG---GTTTT----GAGT-AT-CCA-AA
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         35587 22 -     48185 ----------------T-T-CTAG---GTCTT----GAGT-AT-CCA-AA
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           29102 32 +     77221 ata-----atgttatat-t-cTGG---GTCTT----AGAT-AT-GT--AA
i Psammomys_obesus.NESX01026517.1                       C 0 I 1
s Pteronotus_parnellii.KE867983.1                             818 25 -     27784 ATA-------------T-T-GCTG---GTCTT----GGGT-AT-CTG-AA
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        241224 25 -    344369 GCA-------------G-T-TCTC---CCCTT----GAGT-AT-CTG-AA
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13242933 25 -  17261082 GTA-------------T-T-CCTG---GTTTG----GAGC-AT-CTG-AA
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             600887 25 -   3946241 GTA-------------T-T-CCTG---GTTTG----GAGC-AT-CTG-AA
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131530654 24 - 161321710 GTA-------------G-T-TCTG---GTCTT----AGAT-AT--TG-AA
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             25682 25 +     56732 ATG-------------T-T-CTGA---GTCTT----GGGC-AT-CTC-AA
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6802172 25 +   6970761 ATG-------------T-T-CTGA---GTCTT----GGGC-AT-CTC-AA
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             1564 25 +     18040 ATG-------------T-T-CTGA---GTCTT----GGGC-AT-CTC-AA
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                12767 25 +     68503 GTA-------------T-C-CTTG---GTCTT----AGGA-TT-CTG-AA
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13911049 34 +  90463843 ata-atgttG----TGTTT-CTGG---GTCTT----GGAT-AT-CCT-AA
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1784533 22 +   2252614 atA-------------T-C----A---GTCTT----GGGT-AC-CTG-AA
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           12119 25 -     14454 ATG-------------T-T-CTGA---GTCTT----GGGC-AT-CTC-AA
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206373445 25 - 206558726 ATG-------------T-T-CTGA---GTCTT----GGGC-AT-CTC-AA
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44851093 25 -  45163003 ATG-------------T-T-CTGA---GTCTT----GGGC-AT-CTC-AA
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                16236 25 +    109198 GTA-------------T-T-CCTG---GTTTG----GTGC-AT-CTG-AA
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       4414 25 +     12214 GTA-------------T-T-CCTG---ATCTT----AGGG-TT-CTG-AA
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15668885 25 -  43202129 GTA-------------T-T-CTGA---GTCTT----GGGT-AT-CTC-AA
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                         760 25 +     34089 ATA-------------T-T-CTGA---GTCTT----GGGT-AT-CTC-AA
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                               691 25 -     60842 ATA-------------T-T-CTGA---GTCTT----GGGT-AT-CTC-AA
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                               760 25 +     67014 ATA-------------T-T-CTGA---GTCTT----GGGT-AT-CTC-AA
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                               760 25 +     60816 ATA-------------T-T-CTGA---GTCTT----GGGT-AT-CTC-AA
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                  688 25 -     76454 ATA-------------T-T-CTGA---GTCTT----GGGT-AT-CTC-AA
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17337268 25 -  30362882 AAA-------------T-T-CTGA---GTCTT----GTGT-AT-CTC-AA
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         16869 25 -     62485 AAA-------------T-T-CTGA---GTCTT----GTGT-AT-CTC-AA
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   28314 24 -    114521 GCA-------------G-T-CCTG---AAGTT----AGGT-A--CTG-AA
i Scalopus_aquaticus.ScaAqu_scaffold_9300               I 1 C 0
s Semnopithecus_entellus.k141_1527475                       24107 25 +     26421 ATG-------------T-T-CTGA---GTCTT----GGGC-AT-CTC-AA
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       4569 25 +     20762 ATG-------------T-T-CTGA---GTCTT----GGGC-AT-CTC-AA
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         38302 25 +     40653 ATG-------------T-T-CTGA---GTCTT----GGGC-AT-CTC-AA
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                            8861 25 -     12194 ATG-------------T-T-CTGA---GTCTT----GGGC-AT-CTC-AA
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     22280 25 -     27512 ATG-------------T-T-CTGA---GTCTT----GGGC-AT-CTC-AA
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         31301 25 -     33692 ATG-------------T-T-CTGA---GTCTT----GGGC-AT-CTC-AA
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   94332 33 -    120886 ATA-AT-G-TTA--TAT-T-CTTG---GTCTT----AGAT-AA-GTG-AT
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            14534 25 +    739146 TTA-------------T-T-CTTA---GTCTT----GGGT-AT-CTG-AA
i Solenodon_paradoxus.SolPar_flattened_line_1012        I 1 C 0
s Spermophilus_dauricus.KZ294190.1                        2236184 32 +   2842873 aca------tattatat-t-ttgg---gTCTT----GGAT-AT-CTA-AA
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             230940 25 -    276980 GTA-------------G-A-CCTG---GTCTT----GAAT-AT-CTG-AA
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Sus_scrofa.CM000824.4                                 189268827 25 + 218635234 ATA-------------T-T-CCTG---ATCCT----AGGG-AT-CCA-AA
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                     13898231 25 +  13920577 ATG-------------T-T-CTGA---GTCTT----GGGT-GT-CTC-AA
i Symphalangus_syndactylus.tarseq_24                    I 46 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               2745 25 -      6213 GTA-------------T-T-CTTG---GTCTT----GGGT-AT-TTG-AA
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               11689 24 +     45698 TTA-------------T-T-CCAG---GTCAT----GGGC-TT-CA--AA
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      803685 25 +   1148477 GTA-------------T-T-CCTG---GTCTT----GGGT-AT-CTG-AA
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  54344 25 +     99546 GTA-------------T-T-CCTG---GTCTT----GGGT-AT-CTG-AA
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               23012 25 +     42269 ATA-------------T-T-CTAG---TTCTT----GGGT-AT-CTA-AA
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               56320 25 +     65473 ATA-------------T-T-CTAG---TTCTT----GGGT-AT-CTA-AA
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194003601 25 - 194193292 ATG-------------T-T-CTGA---GTCTT----GGGC-AT-CTC-AA
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                   554 25 +      6782 TTA-------------T-T-CTGG---GTCAT----GGTC-AT-CTA-AA
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 I 1
s Tonatia_saurophila.TonSau_scaffold_3334                  132820 25 -    259118 ATA-------------T-T-CCTA---GTGTT----GGGT-AT-CTA-AA
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        22679 25 +     38948 ATG-------------T-T-CTGA---GTCTT----GGGC-AT-CTC-AA
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   16406 25 -     32910 ATG-------------T-T-CTGA---GTCTT----GGGC-AT-CTC-AA
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       22304 25 +     24652 ATG-------------T-T-CTGA---GTCTT----GGGC-AT-CTC-AA
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      1189 25 -      3559 ATG-------------T-T-CTGA---GTCTT----GGGC-AT-CTC-AA
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           39128 25 -     54611 ATG-------------T-T-CTGA---GTCTT----GGGC-AT-CTC-AA
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       15127 25 +     17312 ATG-------------T-T-CTGA---GTCTT----GGGC-AT-CTC-AA
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    22497 25 -     25040 ATG-------------T-T-CTGA---GTCTT----GGGC-AT-CTC-AA
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          1163 25 +      3528 ATG-------------T-T-CTGA---GTCTT----GGGC-AT-CTC-AA
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  47525 25 +     51589 ATG-------------T-T-CTGA---GTCTT----GGGC-AT-CTC-AA
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       10693 25 +     14732 ATG-------------T-T-CTGA---GTCTT----GGGC-AT-CTC-AA
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       1171 25 -     28054 ATG-------------T-T-CTGA---GTCTT----GGGC-AT-CTC-AA
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44655966 25 -  44834318 ATG-------------T-T-CTGA---GTCTT----GGGC-AT-CTC-AA
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                         976 25 +      3372 ATG-------------T-T-CTGA---GTCTT----GGGC-AT-CTC-AA
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   2174 25 +     90398 GTA-------------T-T-CCTG---GTCTT----AGGG-AT-CTG-AA
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16078272 25 +  31416278 TTA-------------T-T-CCAG---GTCAT----GGGC-AT-CTG-AA
i Trichechus_manatus.JH594618.1                         I 5 C 0
s Tupaia_chinensis.KB320831.1                             2787297 24 -   3938065 ACA-------------T-T-CCAG---GAA-T----AACT-AT-CGA-AA
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_3657864                   268 24 +       342 ACA-------------T-T-CCAG---GAA-T----AGCT-AT-CTA-AA
i Tupaia_tana.TupTan_flattened_line_3657864             C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69310292 25 -  96451834 gta-------------t-t-cctg---atctt----agga-at-CTG-AA
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 23502 24 -     25548 GTA-------------A-C-TCTG---GTTTG----GGGC-A--CTA-AA
i Uropsilus_gracilis.UroGra_scaffold_4143_0             I 1 C 0
s Ursus_maritimus.KK498671.1                              6510922 25 +  28682327 GTA-------------G-T-CCTG---GTCTT----GGTT-AT-GGG-AA
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  1834 22 -     20643 ----------------T-T-CTAG---GTCTT----GAGT-AT-CCA-AA
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             21379 22 -     33872 ----------------T-T-CTAG---GTCTT----GAGT-AT-CCA-AA
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1521605 26 -   2331223 GTA-------------T-TTCCTG---TTCTC----AGGG-AT-CTG-AA
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                134075 25 -    281493 CTA-------------G-T-ACTG---GTCTT----GGGT-AT-CTG-AA
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       123383 32 -    134049 ATGTAT-TA-TA----T-T-TTGA---GTCTA----GAGT-AT-CTA-AA
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        210600 26 -    227762 GTA-------------G-T-CCTG---GTCTC----GGGT-AT-CTGGAA
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     12242 12 -     20485 -------------------------------T----ACAT-AT-CTA-AA
i Zapus_hudsonius.ZapHud_scaffold_64392                 I 4 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           3795 25 -      8775 ATA-------------T-T-TCTG---ATCTT----AGGA-AT-CTG-AA
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16291  1 -    119109 I
e Hylobates_pileatus_b.LG03                                     92553610  0 - 189753342 C
e Dolichotis_patagonum.DolPat_scaffold_14102                33375  0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             56104 16 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                14631 16 +     26546 I
e Cricetulus_griseus.LT883672.1                          53025429  0 +  72327488 C
e Cavia_tschudii.CavTsc_scaffold_488                       173989  0 +    436027 C
e Cavia_porcellus.DS562889.1                             15795798  0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15783848 16 -  24422027 I
e Arctocebus_calabarensis.k141_1161114                      14526 30 +     17483 I

a score=0.000000
s hg38.chr4_GL000008v2_random                                8241 11 +    209709 AT-T---A--------TAGCA----------------------------G----G
s Acinonyx_jubatus.LLWD01000356.1                         2030338 11 +   3721120 GT-G---A--------TAGTA----------------------------T----A
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    108613  5 -    189883 AT-A---A--------T--------------------------------------
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10653672 11 +  23371972 GT-G---A--------TAGTA----------------------------A----A
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7090174 11 -  16596857 GT-G---A--------TAGTA----------------------------A----A
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                    8882  8 -     22067 AT-G---A--------CAAT-----------------------------------
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_3103707                  59264 11 +     61638 GT-G---A--------GAACA----------------------------G----G
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        51072 11 +     53391 GT-G---A--------GAGCA----------------------------G----G
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         1796 11 +     72529 GT-G---A--------GAGCA----------------------------G----G
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          1372 11 +      3797 GT-G---A--------GAGCA----------------------------G----G
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             6466 11 -     18050 GT-G---A--------TAGCA----------------------------A----G
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  7583 11 -     11521 GT-G---A--------TAGCA----------------------------A----G
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              7141 11 -     21359 GT-G---A--------TAGCA----------------------------A----G
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1856473                                5524 11 +      7227 GT-G---A--------TAGCA----------------------------A----G
i Alouatta_juara.k141_1856473                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          6439 11 -     10438 GT-G---A--------TAGCA----------------------------A----G
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            3093 11 +      7047 GT-G---A--------TAGCA----------------------------A----G
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             6377 11 +     10410 GT-G---A--------TAGCA----------------------------A----G
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1374428                             180 11 -     25526 GT-G---A--------TAGCA----------------------------A----G
i Alouatta_puruensis.k141_1374428                       C 0 C 0
s Alouatta_seniculus.k141_990213                             3098 11 +      6429 GT-G---A--------TAGCA----------------------------A----G
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3516838  6 +   4113121 GT-G---A--------TG-------------------------------------
i Ammotragus_lervia.NIVO01013474.1                      C 0 I 1
s Anoura_caudifer.AnoCau_scaffold_422                      387296 11 -    631301 GA-G---A--------TGGGA----------------------------A----A
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            27746  6 +     33004 GT-G---A--------TG-------------------------------------
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 I 1
s Aotus_azarae.k141_3170768                                 58771 11 +     78111 GT-G---A--------TAGCA----------------------------G----G
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            1702 11 +     22701 GT-G---A--------TAGCA----------------------------G----G
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5745662 11 +   9889416 GT-G---A--------TAGCA----------------------------G----G
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             2254 11 -    104377 GT-G---A--------TAGCA----------------------------G----G
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               2254 11 +     23246 GT-G---A--------TAGCA----------------------------G----G
i Aotus_vociferans.k141_718647                          C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 5395 11 -     29036 GA-G---A--------TGGGA----------------------------A----A
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9535516 11 +  39197703 GT-G---A--------TAGCA----------------------------A----G
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             56804 11 +     85812 GT-G---A--------TAGCA----------------------------A----G
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 7801 11 +     89302 GT-G---A--------TAGCA----------------------------A----G
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             12310 11 -     58268 GT-G---A--------TAGCA----------------------------A----G
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             60298 11 +    119057 GT-G---A--------TAGCA----------------------------A----G
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               2248 11 -     25888 GT-G---A--------TAGCA----------------------------A----G
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 3103 11 -     16375 GT-G---A--------TAGCA----------------------------A----G
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_767228                               9075 11 -      9688 GT-G---A--------TAGCA----------------------------A----G
i Avahi_peyrierasi.k141_767228                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26377042 11 +  51448160 GT-T---A--------TAGTA----------------------------A----A
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        2273 11 -     13118 GT-T---A--------TAGTA----------------------------A----A
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   39938  6 -     72089 GT-G---A--------TG-------------------------------------
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 I 1
s Bison_bison.KN264915.1                                  6556360  6 +   6870073 GT-G---A--------TG-------------------------------------
i Bison_bison.KN264915.1                                C 0 I 1
s Bos_indicus.CM003021.1                                138136591  6 - 161108492 GT-G---A--------TG-------------------------------------
i Bos_indicus.CM003021.1                                C 0 I 1
s Bos_mutus.JH883513.1                                     568969  6 -    998990 GT-G---A--------TG-------------------------------------
i Bos_mutus.JH883513.1                                  C 0 I 1
s Bos_taurus.CM000177.6                                 136292324  6 - 158972876 GT-G---A--------TG-------------------------------------
i Bos_taurus.CM000177.6                                 C 0 I 1
s Bubalus_bubalis.KI419065.1                              1227945  6 -   1914593 GT-G---A--------TG-------------------------------------
i Bubalus_bubalis.KI419065.1                            C 0 I 1
s Cacajao_ayresi.k141_724503                               110173 11 -    171031 GT-G---A--------TAGCA----------------------------G----G
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                  9199 11 +    125063 GT-G---A--------TAGCA----------------------------G----G
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                11247 11 -    216513 GT-G---A--------TAGCA----------------------------G----G
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        3786 11 -    134917 GT-G---A--------TAGCA----------------------------G----G
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3216078  8 -   8989139 GT-A---A--------TAGT-----------------------------------
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           394265  8 -  15254737 GT-A---A--------TAGT-----------------------------------
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2969999  8 +   6889770 GT-A---A--------TAGT-----------------------------------
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11515060 11 +  39901454 GT-G---A--------TAGTA----------------------------A----A
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   10077 11 +     87036 GT-G---A--------TAGTA----------------------------A----A
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11261719 11 -  35597290 GT-G---A--------TAGTA----------------------------A----A
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11084248 11 +  39895921 GT-G---A--------TAGTA----------------------------A----A
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16451282 11 -  44759192 GT-G---A--------TAGTA----------------------------A----A
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21321945  6 + 157394656 GT-G---A--------TG-------------------------------------
i Capra_aegagrus.CM003214.1                             C 0 I 1
s Capra_hircus.CM004562.1                               135703172  6 - 157403528 GT-G---A--------TG-------------------------------------
i Capra_hircus.CM004562.1                               C 0 I 1
s Capromys_pilorides.CapPil_scaffold_647363                   784  5 +      1887 -------A--------CAGT-----------------------------------
i Capromys_pilorides.CapPil_scaffold_647363             I 8 C 0
s Carlito_syrichta.NW_007248099.1                          305546 11 +    345090 GT-G---A--------TAGCA----------------------------A----G
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               56476 11 +     67245 GA-G---A--------TGGGA----------------------------A----A
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   155790 11 -    276539 GT-A---A--------CAGTA----------------------------A----A
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18886984 11 -  29618158 GT-G---A--------TAGCA----------------------------G----G
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 4530 11 -     26817 GT-G---A--------TAGCA----------------------------G----G
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                 8770 11 +     25043 GT-G---A--------TAGCA----------------------------G----G
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         4582 11 +     21754 GT-G---A--------TAGCA----------------------------A----G
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4359605 11 +   7569818 GT-G---A--------TAGTA----------------------------A----A
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_305802         1247 11 +      1857 GT-G---A--------TAGTA----------------------------A----A
i Ceratotherium_simum_cottoni.CerCot_scaffold_305802    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6551060 11 +   6739814 GT-G---A--------GAGCA----------------------------G----G
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      52537 11 -     54931 GT-G---A--------GAGCA----------------------------G----G
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         17521 11 -     19697 GT-G---A--------GAGCA----------------------------G----G
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         55052 11 -    107033 GT-G---A--------GAGCA----------------------------G----G
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        1495 11 -      3853 GT-G---A--------GAGCA----------------------------G----G
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          25427 11 +     30494 GT-G---A--------GAGCA----------------------------G----G
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           1450 11 -      4022 GT-G---A--------GAGCA----------------------------G----G
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          1342 11 -      3505 GT-G---A--------GAGCA----------------------------G----G
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           20151 11 +     35983 GT-G---A--------GAGCA----------------------------G----G
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11985923 11 +  12117833 at-g---a--------tagag----------------------------g----a
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46473423 11 +  46592721 GT-G---A--------GAGCA----------------------------G----G
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      31250 11 +     33420 GT-G---A--------GAGCA----------------------------G----G
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        1286 11 -      3443 GT-G---A--------GAGCA----------------------------G----G
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      2277 11 -      4669 GT-G---A--------GAGCA----------------------------G----G
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        2081 11 -      4411 GT-G---A--------GAGCA----------------------------G----G
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         1601 11 -      4205 GT-G---A--------GAGCA----------------------------G----G
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           55439 11 -     68416 GT-G---A--------TAGCA----------------------------A----G
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            4488 11 +     13308 GT-G---A--------TAGCA----------------------------A----G
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             1783 11 -     18223 GT-G---A--------CAGCA----------------------------G----G
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             18806 11 +     25473 GT-G---A--------CAGCA----------------------------G----G
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           37845 11 +     57117 GT-G---A--------CAGCA----------------------------G----G
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          42520 11 +     54541 GT-G---A--------CAGCA----------------------------G----G
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15957936  5 +  43084221 -------G--------TAGT-----------------------------------
i Chinchilla_lanigera.JH721867.1                        I 8 C 0
s Chiropotes_israelita.k141_1189915                         67394 11 +    196370 GT-G---A--------TAGCA----------------------------G----G
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          11568 11 +     40510 GT-G---A--------TAGCA----------------------------G----G
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15134881 11 -  15256731 GT-G---A--------GAGCA----------------------------G----G
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      29927 11 -     53260 GT-G---A--------GAGCA----------------------------G----G
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101140375 11 + 101219884 GT-G---A--------GAGCA----------------------------G----G
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                13476 11 -     21363 GT-G---A--------TAGTA----------------------------A----G
i Choloepus_didactylus.ChoDid_scaffold_36182            I 1 C 0
s Choloepus_hoffmanni.KN194586.1                           758782 11 +    964067 GT-G---A--------TAGTA----------------------------A----G
i Choloepus_hoffmanni.KN194586.1                        I 1 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_141308              5557 11 -     12508 TT-G---A--------TAGAA----------------------------A----G
i Chrysochloris_asiatica.ChrAsi_scaffold_141308         C 0 C 0
s Colobus_angolensis.KN985967.1                          10878957 11 +  10971483 GT-G---A--------GAGCA----------------------------G----G
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147660116 11 + 156195979 GT-G---A--------GAGCA----------------------------G----G
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            12101 11 +     23629 GT-G---A--------GAGCA----------------------------G----G
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         35875 11 -     40477 AA-G---A--------TGGta----------------------------a----a
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 274051  5 -    399297 AT-G---A--------C--------------------------------------
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             15691  7 -     19186 AT-G---A--------TA-T-----------------------------------
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            48366 11 -     70449 GT-G---A--------TAGTA----------------------------A----A
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  204769  5 -    956709 AT-G---G--------T--------------------------------------
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 26946  5 -     67205 -------G--------CAGT-----------------------------------
i Ctenomys_sociabilis.CteSoc_scaffold_19489             I 8 C 0
s Dasypus_novemcinctus.JH568778.1                          178655  6 -   6883506 -----------------CATA----------------------------A----G
i Dasypus_novemcinctus.JH568778.1                       I 1 C 0
s Daubentonia_madagascariensis.ctg11                     16841313 11 +  31942871 GT-G---A--------TAGCA----------------------------A----A
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80033781 11 -  96802777 GT-T---A--------TAGTA----------------------------A----A
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18695783 11 -  18957592 GA-G---A--------TGGTA----------------------------A----A
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 318913 11 +    993696 GT-G---G--------TAGTA----------------------------A----A
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_24487                 61068 11 +     62380 GT-G---A--------TAGTA----------------------------A----A
i Diceros_bicornis.DicBicMic_scaffold_24487             C 0 C 0
s Echinops_telfairi.JH980316.1                           22990809 11 -  44670279 G-TA---G--------TAGTA----------------------------A----G
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                  9165 11 +     24177 ga-g---a--------taata----------------------------a----a
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1488483  6 +   1727528 GT-G---A--------TG-------------------------------------
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 I 1
s Elephantulus_edwardii.JH947210.1                        7803206  8 +  15467074 GA-C---A--------TAGT-----------------------------------
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        235699  5 -    369425 AT-G---A--------C--------------------------------------
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           2709  5 -      7838 AT-G---A--------C--------------------------------------
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85866981 11 +  99434291 GT-G---A--------TAGTA----------------------------A----G
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Equus_asinus.JREZ01000137.1                             2952173 11 -   4388051 GT-C---A--------TAGTA----------------------------A----A
i Equus_asinus.JREZ01000137.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13346184 11 +  41866177 GT-C---A--------TAGTA----------------------------A----A
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                           8176 11 +     92910 GT-C---A--------TAGTA----------------------------A----A
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erythrocebus_patas.Contig8                             48767060 11 -  48907691 GT-G---A--------GAGCA----------------------------G----G
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          311926 11 +    330699 GT-T---A--------TAGTA----------------------------A----A
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             58355 11 +     89355 GT-T---A--------TAGTA----------------------------A----A
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              1510 11 +     13586 GT-G---A--------TAGCA----------------------------A----G
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               1447 11 -      6809 GT-G---A--------TAGCA----------------------------A----G
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             7917 11 +     36558 GT-G---A--------TAGCA----------------------------A----G
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             4234 11 +     60246 GT-G---A--------TAGCA----------------------------A----G
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 7722 11 +    109717 GT-G---A--------TAGCA----------------------------A----G
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               12096 11 +     16540 GT-G---A--------TAGCA----------------------------A----G
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                12373 11 +     27497 GT-G---A--------TAGGA----------------------------A----G
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           14829 11 +     26808 GT-G---A--------TAGCA----------------------------A----G
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                29563 11 +     46535 GT-G---A--------TAGCA----------------------------A----G
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              12286 11 -     29447 GT-G---A--------TAGCA----------------------------A----G
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129889318 11 - 159252932 GT-G---A--------TAGTA----------------------------T----A
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129276392 11 - 158578461 GT-G---A--------TAGTA----------------------------T----A
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 17527 11 +     52776 GT-G---A--------TAGTA----------------------------T----A
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13889514 13 -  19261668 -------ttaaaatggtaGT-----------------------------------
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     207456 11 -    847004 gt-a---a--------tagca----------------------------a----G
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                            9836 11 -     43889 gt-a---a--------tagcA----------------------------A----G
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           6856 39 +     27357 gt-a---a--------tagcagATATACAAGTAACTTACTAGTAAACCTA----G
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               152771 11 +    324696 GT-G---A--------TAGTA----------------------------A----A
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    177996  6 -    189561 GT-G---A--------TG-------------------------------------
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 I 1
s Glis_glis.GliGli_scaffold_79770                            9187  8 -     18683 AC-C---A--------TGGT-----------------------------------
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               1634 11 -     14630 AT-G---A--------TAGCA----------------------------G----G
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119648732 11 - 195582420 AT-G---A--------TAGCA----------------------------G----G
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   73746  8 +    118900 AT-G---A--------TGTT-----------------------------------
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                         2057 11 +      3980 GT-G---A--------TAGCA----------------------------A----G
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             24537 11 +     26611 GT-G---A--------TAGCA----------------------------A----G
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             1991 11 +     56096 GT-G---A--------TAGCA----------------------------A----G
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        25264 11 -     42470 GT-G---A--------TAGCA----------------------------A----G
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        41861 11 -     54384 GT-G---A--------TAGCA----------------------------A----G
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              13569 11 +     53719 GT-G---A--------TGGTA----------------------------A----A
i Helogale_parvula.HelPar_flattened_line_22962          I 279 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                24350  6 -     91191 GT-G---A--------TG-------------------------------------
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 I 1
s Heterocephalus_glaber.JH602058.1                        2547623 13 +  31725842 -------ttaaaatgatagt-----------------------------------
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               53041 11 +     73687 GT-A---A--------CAATA----------------------------A----G
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              144051 11 +    277961 GC-A---T--------TAGTA----------------------------A----A
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      275475 11 -    477199 GT-G---A--------TGGTA----------------------------A----A
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              4630 11 -      9143 GT-G---A--------TGGTA----------------------------A----A
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg649                                    98306 11 +    115816 AT-G---A--------TAGCA----------------------------G----G
i Hoolock_leuconedys.ctg649                                I 25 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 12637 11 -     67322 AT-G---A--------TAGTA----------------------------A----A
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hylobates_abbotti.k141_493872                              1443 11 +      5897 AT-G---A--------TAGCA----------------------------G----G
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_282275                                656 11 +      1846 AT-G---A--------TAGCA----------------------------G----G
i Hylobates_agilis.k141_282275                          C 0 C 0
s Hylobates_klossii.k141_466549                              7901 11 +     11537 AT-G---A--------TAGCA----------------------------G----G
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_muelleri.k141_1133650                             878 11 -      2775 AT-G---A--------TAGCA----------------------------G----G
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             29480 11 -     60944 AT-G---A--------TAGCA----------------------------G----G
i Hylobates_pileatus_a.tarseq_592                         I 8 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     2608  5 +     22540 -------G--------TAGT-----------------------------------
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7122290  8 +  13083262 AT-G---A--------TGGT-----------------------------------
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_3334527                                   8501 11 +      9207 GT-G---A--------TAGCA----------------------------A----G
i Indri_indri.k141_3334527                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               5708 11 +     17520 GT-T---A--------TAATA----------------------------A----A
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8561844  8 +  11848649 AT-G---A--------CAAT-----------------------------------
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               20540 11 +     37189 GT-T---A--------TAGTA----------------------------A----A
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          46359 11 -    147782 GT-G---A--------TAGCA----------------------------A----G
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   110659 11 -    115756 GA-G---A--------TGGTA----------------------------A----A
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258403540 11 - 285822530 GT-G---A--------CAGCA----------------------------A----G
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        20434 11 +     39228 GT-G---A--------TAGCA----------------------------A----G
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            49810 11 +     63517 GT-G---A--------TAGCA----------------------------A----G
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        75030 11 +    116806 GT-G---A--------TAGCA----------------------------A----G
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     28071 11 -     33031 GT-G---A--------TAGCA----------------------------A----G
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3082340 11 -   3498232 GT-G---G--------TAGTA----------------------------A----A
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lipotes_vexillifer.KE558548.1                            132887  8 +   3060487 GT-T---A--------TAGT-----------------------------------
i Lipotes_vexillifer.KE558548.1                         C 0 I 3
s Lophocebus_aterrimus.ctg55                             19244146 11 +  19376315 GT-G---A--------GAGCA----------------------------G----G
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            7169 11 +     84689 GT-G---A--------TAGCA----------------------------A----G
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3774927 11 +   6799190 GT-G---A--------TAGCA----------------------------A----G
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20587617 11 -  62548349 TT-G---A--------TCTTA----------------------------A----G
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11083704 11 +  39895028 GT-G---A--------TAGTA----------------------------A----A
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             15832 11 +     74745 GT-G---A--------GAGCA----------------------------G----G
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12702338 11 +  12821369 GT-G---A--------GAGCA----------------------------G----G
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               4431 11 +      6569 GT-G---A--------GAGCA----------------------------G----G
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           42731 11 +     63263 GT-G---A--------GAGCA----------------------------G----G
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_1068107                               11308 11 +     12679 GT-G---A--------GAGCA----------------------------G----G
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                 881 11 +      3017 GT-G---A--------GAGCA----------------------------G----G
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  42493 11 -     79256 GT-G---A--------GAGCA----------------------------G----G
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196031413 11 + 196197964 GT-G---A--------GAGCA----------------------------G----G
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11441517 11 +  11645122 GT-G---A--------GAGCA----------------------------G----G
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   1443 11 -     46448 GT-G---A--------GAGCA----------------------------G----G
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                1270 11 -      3617 GT-G---A--------GAGCA----------------------------G----G
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 11603 11 -     55006 GT-G---A--------GAGCA----------------------------G----G
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43836642 11 +  43892939 GT-G---A--------GAGCA----------------------------G----G
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                3865 11 -      5978 GT-G---A--------GAGCA----------------------------G----G
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               1445 11 -     27140 GT-G---A--------GAGCA----------------------------G----G
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43433306 11 -  43563597 GT-G---A--------GAGCA----------------------------G----G
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4446132 11 -   4543643 GT-G---A--------GAGCA----------------------------G----G
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            142952 11 +    252755 GT-G---A--------TAGTA----------------------------A----A
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             33017  9 +     58827 GT-G---A--------TAGTA----------------------------------
i Manis_pentadactyla.KN017078.1                         C 0 I 1
s Marmota_marmota.CZRN01000005.1                         36870137  8 +  64221397 AT-G---A--------TGGT-----------------------------------
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       61456 11 -    234502 GA-G---A--------TGGTA----------------------------A----A
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_1828            224538 11 -    226874 GT-G---A--------TAGTA----------------------------A----G
i Mellivora_capensis.MelCap_flattened_line_1828         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233                8074  1 +     15977 ----------------C--------------------------------------
i Meriones_unguiculatus.MerUng_scaffold_52233           I 1 C 0
s Mesocricetus_auratus.KB708139.1                         1042995  5 -  26018355 AT-G---A--------C--------------------------------------
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_183284                    579 11 +      2166 GT-T---A--------TAGTA----------------------------A----A
i Mesoplodon_bidens.MesBid_scaffold_183284              C 0 C 0
s Microcebus_murinus.CM007691.1                          16506655 11 +  47401472 GT-G---A--------TAGCA----------------------------A----G
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  27758 10 -     48017 G--A---A--------TAGTA----------------------------A----G
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               19632 11 -     32043 GA-G---A--------TGGTA----------------------------A----A
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22815354  5 -  98408828 AT-G---G--------C--------------------------------------
i Microtus_ochrogaster.CM001673.1                       I 12 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8206371 10 +  10048721 GA-G---G--------TGATG----------------------------A-----
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            31048 11 +     45743 GA-G---G--------TGATG----------------------------A----C
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        31980 11 +     34273 GG-G---A--------GAGCA----------------------------G----G
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         7638 11 -    104932 GT-G---G--------TAGTA----------------------------A----A
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     2069 11 +      8497 GT-G---A--------TAGCA----------------------------A----G
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 143306 11 +    154973 GT-T---A--------TAGTA----------------------------A----A
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                157953 11 +    265003 GA-G---A--------TTGTA----------------------------A----A
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 1581  6 -      4346 GT-G---A--------TG-------------------------------------
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 I 1
s Mungos_mungo.MunMun_flattened_line_8729                  141259 11 -    168139 GT-G---A--------TGGTA----------------------------A----A
i Mungos_mungo.MunMun_flattened_line_8729               I 273 C 0
s Murina_feae.MurFea_scaffold_2254                          16167 11 -    100666 GA-G---A--------TGATA----------------------------A----A
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70761540  5 +  92629107 at-g---g--------a--------------------------------------
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75484615  5 +  98207768 at-g---g--------a--------------------------------------
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67549155  5 +  89017189 at-g---g--------a--------------------------------------
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74324253  5 +  97876770 AT-G---G--------A--------------------------------------
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              7052  8 +     98495 AT-G---A--------TGGT-----------------------------------
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 I 2
s Mustela_putorius.JH417978.1                             4419391 11 -  28371801 GT-G---A--------TGGTA----------------------------A----G
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     86527  5 -    117718 -------G--------CAGT-----------------------------------
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 8 I 1
s Myotis_brandtii.KE161952.1                               964498 11 +   8389877 GA-G---A--------TGGTA----------------------------A----A
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5016175 11 +   6462685 GA-G---A--------TGGTA----------------------------A----A
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3462084 11 -   3747815 GA-G---A--------TGGTA----------------------------A----A
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         7281 11 +     66751 GA-G---A--------TGGTA----------------------------A----A
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             2035 11 -      8794 GT-G---A--------CAGTA----------------------------A----G
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            107410  3 +    362372 at-c---------------------------------------------------
i Nannospalax_galili.KL201303.1                         C 0 I 5
s Nasalis_larvatus.k141_153429                               4345 11 +     48152 AT-G---A--------GAGCA----------------------------G----G
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4481239 11 -  14209539 GT-G---A--------TAGTA----------------------------A----A
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3947915 11 -   4490290 GT-T---A--------TAGTA----------------------------A----A
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  46285  8 +     94413 GA-G---A--------TGAT-----------------------------------
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1223136                          10112 11 -     11253 AT-G---A--------TAGCA----------------------------G----G
i Nomascus_annamensis.k141_1223136                      C 0 C 0
s Nomascus_concolor.k141_468488                               755 11 -      1482 AT-G---A--------TAGCA----------------------------G----G
i Nomascus_concolor.k141_468488                         C 0 C 0
s Nomascus_gabriellae.k141_906566                             744 11 -      2544 AT-G---A--------TAGCA----------------------------G----G
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             21218 11 -  18771707 AT-G---A--------TAGCA----------------------------G----G
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_844529                                   493 11 +      2124 AT-G---A--------TAGCA----------------------------G----G
i Nomascus_siki_a.k141_844529                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                26700 11 +   3668941 GT-G---A--------TAGTA----------------------------A----A
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65563515 11 -  95554990 GT-G---A--------TAGCA----------------------------A----G
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                             360 11 +      6470 GT-G---A--------TAGCA----------------------------A----G
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65665882 11 +  89412551 GT-G---A--------TAGCA----------------------------A----G
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Octodon_degus.JH651621.1                                3675077  5 +  10294119 -------G--------CAGG-----------------------------------
i Octodon_degus.JH651621.1                              I 8 C 0
s Odobenus_rosmarus.KB229369.1                             675898 11 -   3126709 GT-G---T--------TAATA----------------------------A----A
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1076706  6 +   1425656 GT-G---A--------TG-------------------------------------
i Odocoileus_virginianus.KZ101650.1                     C 0 I 1
s Okapia_johnstoni.LVCL01S0017931.1                         33868  6 +     78940 GT-G---A--------TG-------------------------------------
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 I 1
s Ondatra_zibethicus.OndZib_scaffold_6821                  121177  5 +    145789 AT-G---A--------C--------------------------------------
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  33113  5 +     62360 AT-G---A--------C--------------------------------------
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7221599 11 -   7562323 GT-T---A--------CAGTA----------------------------A----A
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              39830 11 -     66828 GT-A---T--------TAGTA----------------------------A----G
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      304035 11 -    505867 GT-G---A--------TAGTA----------------------------A----A
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       35524 11 +     38679 gt-a---a--------tagTA----------------------------A----G
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18004962 11 -  38779656 GT-A---A--------TAGCA----------------------------A----G
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134074152  6 - 275406953 GT-G---A--------TG-------------------------------------
i Ovis_aries.CM001582.2                                 C 0 I 1
s Ovis_canadensis.OviCan_scaffold_6251                      75366  6 +    140051 GT-G---A--------TG-------------------------------------
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 I 1
s Pan_paniscus.CM003386.1                               127570976 11 - 205426864 AT-G---A--------TAGCA----------------------------C----G
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120148123 11 - 196562556 AT-G---A--------TAGCA----------------------------C----G
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  30481 11 +    295523 GT-G---A--------TAGTA----------------------------T----A
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3634085 11 +  18214204 GT-G---A--------TAGTA----------------------------T----A
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5023862 11 -   6340057 GT-G---A--------TAGTA----------------------------T----A
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1062867  6 -   1292953 GT-G---A--------TG-------------------------------------
i Pantholops_hodgsonii.KE114631.1                       C 0 I 1
s Papio_anubis.CM001492.2                               188152091 11 - 188283584 GT-G---A--------GAGCA----------------------------G----G
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            48303 11 +     76494 GT-G---A--------GAGCA----------------------------G----G
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47509487 11 +  47705337 GT-G---A--------GAGCA----------------------------G----G
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 63470 11 -    104429 GT-G---A--------GAGCA----------------------------G----G
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  13254 11 -     29451 GT-G---A--------GAGCA----------------------------G----G
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                33659 11 +     35859 GT-G---A--------GAGCA----------------------------G----G
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    111813 11 -    135482 GT-G---A--------TAGTA----------------------------A----A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           1764 11 -     23713 gt-g---a--------taaca----------------------------A----G
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            21061 11 -     27972 gt-g---a--------taaca----------------------------a----g
i Perodicticus_potto.k141_713187                        C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4946282  5 -   8017169 AT-A---A--------C--------------------------------------
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            118216 11 -    122454 GT-T---A--------TAGTA----------------------------A----A
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           1346 11 -      3310 GT-G---A--------GAGCA----------------------------G----G
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       21252 11 -     82327 GT-G---A--------GAGCA----------------------------G----G
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           18003 11 +     19957 GT-G---A--------GAGCA----------------------------G----G
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26736012 11 +  26888534 GT-G---A--------GAGCA----------------------------G----G
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            93274 11 +    112873 GA-G---A--------TGGTA----------------------------A----A
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             39886 11 -     61926 GT-G---A--------TAGCA----------------------------G----G
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        21315 11 +     78826 GT-G---A--------TAGCA----------------------------G----G
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              5266 11 -     15800 GT-G---A--------TAGCA----------------------------G----G
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                         8464 11 -     16101 GT-G---A--------TAGCA----------------------------G----G
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          1773 11 +      9673 GT-G---A--------TAGCA----------------------------G----G
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13470767 11 -  19735023 GT-G---A--------TAGCA----------------------------G----G
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                            9675 11 -     31692 GT-G---A--------TAGCA----------------------------G----G
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           2283 11 +     21690 GT-T---A--------TAGTA----------------------------A----A
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       19039 11 +     44506 GT-G---A--------CAGCA----------------------------G----G
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        19257 11 +     67491 GT-G---A--------CAGCA----------------------------G----G
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                       9502 11 -     98129 GT-G---A--------CAGCA----------------------------G----G
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     19102 11 +    147771 GT-G---A--------CAGCA----------------------------G----G
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        19353 11 -     23762 GT-G---A--------CAGCA----------------------------G----G
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_2078842                         19301 11 -     19696 GT-G---A--------CAGCA----------------------------G----G
i Plecturocebus_dubius.k141_2078842                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         19175 11 +    152463 GT-G---A--------CAGCA----------------------------G----G
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      5932 11 +      8943 GT-G---A--------CAGCA----------------------------G----G
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                          8892 11 +    134592 GT-G---A--------CAGCA----------------------------G----G
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          19485 11 -     75465 GT-G---A--------CAGCA----------------------------G----G
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              183529 11 -    373494 AT-G---A--------TAACA----------------------------G----G
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19803433 11 +  19899266 AT-G---A--------TAACA----------------------------G----G
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               1582 11 -     15069 AT-G---A--------GAGCA----------------------------G----G
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              1716 11 +     14865 AT-G---A--------GAGCA----------------------------G----G
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                72905 11 +     78963 GT-A---A--------CAATA----------------------------A----G
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6844913 11 +  12164890 GT-G---A--------TAGCA----------------------------A----G
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     13348 11 -     30946 GT-A---A--------TAGCA----------------------------A----G
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_diadema.k141_577245                           39383 11 +     52369 GT-G---A--------TAGCA----------------------------A----G
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         31772 11 -     44753 GT-G---A--------TAGCA----------------------------A----G
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            13694 11 +     27322 GT-G---A--------TAGCA----------------------------A----G
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       13338 11 -     53241 GT-G---A--------TAGCA----------------------------A----G
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         35609 11 -     48185 GT-A---A--------TAGCA----------------------------A----G
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           29135  1 +     77221 ----------------C--------------------------------------
i Psammomys_obesus.NESX01026517.1                       I 1 C 0
s Pteronotus_parnellii.KE867983.1                             843 11 -     27784 GA-G---A--------TGGTA----------------------------A----A
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        241249 11 -    344369 GT-G---A--------TAGTA----------------------------A----G
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13242958 11 -  17261082 GA-G---A--------TGATC----------------------------A----A
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             600912 11 -   3946241 GA-G---A--------TGATC----------------------------A----A
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131530678 11 - 161321710 GT-G---A--------TGGTA----------------------------T----A
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             25707 11 +     56732 AT-G---A--------GAGCA----------------------------G----G
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6802197 11 +   6970761 AT-G---A--------GAGCA----------------------------G----G
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             1589 11 +     18040 AT-G---A--------GAGCA----------------------------G----G
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                12792  6 +     68503 GT-G---A--------TG-------------------------------------
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 I 1
s Rattus_norvegicus.chr11                                13911083  5 +  90463843 AT-G---G--------A--------------------------------------
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1784555 11 +   2252614 GT-G---A--------TGGTA----------------------------A----A
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           12144 11 -     14454 AT-G---A--------GAGCA----------------------------G----G
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206373470 11 - 206558726 AT-G---A--------GAGCA----------------------------G----G
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44851118 11 -  45163003 AT-G---A--------GAGCA----------------------------G----G
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                16261 11 +    109198 GA-G---A--------TGATA----------------------------A----A
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       4439  6 +     12214 GT-G---A--------TG-------------------------------------
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 I 1
s Saimiri_boliviensis.NW_024100938.1                     15668910 11 -  43202129 GC-G---A--------TAGCA----------------------------G----G
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                         785 11 +     34089 GC-G---A--------TAGCA----------------------------G----G
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                               716 11 -     60842 GC-G---A--------TAGCA----------------------------G----G
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                               785 11 +     67014 GC-G---A--------TAGCA----------------------------G----G
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                               785 11 +     60816 GC-G---A--------TAGCA----------------------------G----G
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                  713 11 -     76454 GC-G---A--------TAGCA----------------------------G----G
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17337293 11 -  30362882 GT-G---A--------TAGCA----------------------------G----G
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         16894 11 -     62485 GT-G---A--------TAGCA----------------------------G----G
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   28338  5 -    114521 GT-G---C-----------T-----------------------------------
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1527475                       24132 11 +     26421 AT-G---A--------GAGCA----------------------------G----G
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       4594 11 +     20762 AT-G---A--------GAGCA----------------------------G----G
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         38327 11 +     40653 AT-G---A--------GAGCA----------------------------G----G
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                            8886 11 -     12194 AT-G---A--------GAGCA----------------------------G----G
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     22305 11 -     27512 AT-G---A--------GAGCA----------------------------G----G
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         31326 11 -     33692 AT-G---A--------GAGCA----------------------------G----G
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   94365  5 -    120886 CT-G---A--------T--------------------------------------
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            14559  8 +    739146 GT-G---A--------AAGT-----------------------------------
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2236216  8 +   2842873 AT-G---A--------TGGT-----------------------------------
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             230965 10 -    276980 GT-G---A--------TAGTA----------------------------A-----
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            23926 11 +     62062 GT-G---A--------TGGTA----------------------------A----A
i Suricata_suricatta.SurSur_flattened_line_20339        N 0 C 0
s Sus_scrofa.CM000824.4                                 189268852 11 + 218635234 AT-A---A--------CAGTA----------------------------A----T
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                     13898256 11 +  13920577 AT-G---A--------TAGCA----------------------------G----G
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               2770 11 -      6213 GA-G---A--------TGGTC----------------------------A----A
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               11713 11 +     45698 GT-G---A--------CAGTA----------------------------A----G
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      803710 11 +   1148477 GT-G---A--------TAGTA----------------------------A----A
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  54369 11 +     99546 GT-G---A--------TAGTA----------------------------A----A
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               23037 11 +     42269 GT-G---G--------TAGCA----------------------------A----G
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               56345 11 +     65473 GT-G---A--------TAGCA----------------------------A----G
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194003626 11 - 194193292 GT-G---A--------GAGCA----------------------------G----G
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                   580  6 +      6782 -----------------CATT----------------------------A----G
i Tolypeutes_matacus.TolMat_scaffold_269431             I 1 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  132845 15 -    259118 AA-G---A--------TGGGA----------------------------ATTCCA
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        22704 11 +     38948 AT-G---A--------GAGCA----------------------------G----G
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   16431 11 -     32910 AT-G---A--------GAGCA----------------------------G----G
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       22329 11 +     24652 AT-G---A--------GAGCA----------------------------G----G
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      1214 11 -      3559 AT-G---A--------GAGCA----------------------------G----G
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           39153 11 -     54611 AT-G---A--------GAGCA----------------------------G----G
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       15152 11 +     17312 AT-G---A--------GAGCA----------------------------G----G
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    22522 11 -     25040 AT-G---A--------GAGCA----------------------------G----G
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          1188 11 +      3528 AT-G---A--------GAGCA----------------------------G----G
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  47550 11 +     51589 AT-G---A--------GAGCA----------------------------G----G
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       10718 11 +     14732 AT-G---A--------GAGCA----------------------------G----G
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       1196 11 -     28054 AT-G---A--------GAGCA----------------------------G----G
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44655991 11 -  44834318 AT-G---A--------GAGCA----------------------------G----G
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        1001 11 +      3372 AT-G---A--------GAGCA----------------------------G----G
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   2199  6 +     90398 GT-G---A--------TG-------------------------------------
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 I 5
s Trichechus_manatus.JH594618.1                          16078297  6 +  31416278 GT-G---A--------TA-------------------------------------
i Trichechus_manatus.JH594618.1                         C 0 I 1
s Tupaia_chinensis.KB320831.1                             2787321 10 -   3938065 AT-G---G--------TAGT-----------------------------A----A
i Tupaia_chinensis.KB320831.1                           C 0 I 261
s Tupaia_tana.TupTan_flattened_line_3657864                   292 11 +       342 AT-G---G--------TAGTT----------------------------A----A
i Tupaia_tana.TupTan_flattened_line_3657864             C 0 N 0
s Tursiops_truncatus.MRVK01000923.1                      69310317 11 -  96451834 GT-T---A--------CAGTA----------------------------A----A
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 23526  5 -     25548 GT-G---A-----------T-----------------------------------
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6510947 11 +  28682327 GT-G---A--------TAGTA----------------------------A----A
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  1856 11 -     20643 GT-G---A--------TAGCA----------------------------A----G
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             21401 11 -     33872 GT-G---A--------TAGCA----------------------------A----G
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1521631 11 -   2331223 GC-A---A--------TAGTA----------------------------A----G
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                134100 11 -    281493 GT-G---A--------TAGTA----------------------------A----A
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       123415  8 -    134049 AT-G---A--------TGGT-----------------------------------
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        210626 11 -    227762 GT-G---T--------TAATA----------------------------A----A
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     12254  8 -     20485 AT-G---A--------TAAT-----------------------------------
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           3820 11 -      8775 GT-T---A--------TAGTA----------------------------A----A
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Condylura_cristata.JH655880.1                          60609754  0 +  78930452 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16291  1 -    119109 I
e Hylobates_pileatus_b.LG03                                     92553610  0 - 189753342 C
e Dolichotis_patagonum.DolPat_scaffold_14102                33375  0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             56104 16 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                14631 16 +     26546 I
e Cricetulus_griseus.LT883672.1                          53025429  0 +  72327488 C
e Cavia_tschudii.CavTsc_scaffold_488                       173989  0 +    436027 C
e Cavia_porcellus.DS562889.1                             15795798  0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15783848 16 -  24422027 I
e Castor_canadensis.CasCan_scaffold_47037                   27024  0 +     33760 C
e Arctocebus_calabarensis.k141_1161114                      14526 30 +     17483 I

a score=0.000000
s hg38.chr4_GL000008v2_random                                8252  6 +    209709 T---AA----GA-A
s Acinonyx_jubatus.LLWD01000356.1                         2030349  4 +   3721120 T---AA----C---
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    108618  2 -    189883 -----------A-A
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10653683  4 +  23371972 T---AA----G---
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7090185  4 -  16596857 T---AA----G---
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                    8890  5 -     22067 ----AA----TG-A
i Allactaga_bullata.AllBul_scaffold_70162               C 0 I 2
s Allenopithecus_nigroviridis.k141_3103707                  59275  6 +     61638 T---AA----GA-A
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        51083  6 +     53391 T---AA----GA-A
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         1807  6 +     72529 T---AA----GA-A
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          1383  6 +      3797 T---AA----GA-A
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             6477  6 -     18050 T---AA----GA-A
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  7594  6 -     11521 T---AA----GA-A
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              7152  6 -     21359 T---AA----GA-A
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1856473                                5535  6 +      7227 T---AA----GA-A
i Alouatta_juara.k141_1856473                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          6450  6 -     10438 T---AA----GA-A
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            3104  6 +      7047 T---AA----GA-A
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             6388  6 +     10410 T---AA----GA-A
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1374428                             191  6 -     25526 T---AA----GA-A
i Alouatta_puruensis.k141_1374428                       C 0 C 0
s Alouatta_seniculus.k141_990213                             3109  6 +      6429 T---AA----GA-A
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3516845  3 +   4113121 ----GA----G---
i Ammotragus_lervia.NIVO01013474.1                      I 1 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      387307  3 -    631301 T---AA--------
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            27753  3 +     33004 ----GA----G---
i Antilocapra_americana.AntAmePen_scaffold_42841        I 1 C 0
s Aotus_azarae.k141_3170768                                 58782  6 +     78111 T---AA----GA-A
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            1713  6 +     22701 T---AA----GA-A
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5745673  6 +   9889416 T---AA----GA-A
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             2265  6 -    104377 T---AA----GA-A
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               2265  6 +     23246 T---AA----GA-A
i Aotus_vociferans.k141_718647                          C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 5406  3 -     29036 T---AA--------
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9535527  6 +  39197703 T---AA----GA-A
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             56815  6 +     85812 T---AA----GA-A
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 7812  6 +     89302 T---AA----GA-A
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             12321  6 -     58268 T---AA----GA-A
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             60309  6 +    119057 T---AA----GA-A
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               2259  6 -     25888 T---AA----GA-A
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 3114  6 -     16375 T---AA----CA-A
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_767228                               9086  6 -      9688 T---AA----CA-A
i Avahi_peyrierasi.k141_767228                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26377053  7 +  51448160 TAAGAA----G---
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        2284  7 -     13118 TAAGAA----G---
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   39945  3 -     72089 ----GA----G---
i Beatragus_hunteri.BeaHun_scaffold_21644               I 1 C 0
s Bison_bison.KN264915.1                                  6556367  3 +   6870073 ----GA----G---
i Bison_bison.KN264915.1                                I 1 C 0
s Bos_indicus.CM003021.1                                138136598  3 - 161108492 ----GA----G---
i Bos_indicus.CM003021.1                                I 1 C 0
s Bos_mutus.JH883513.1                                     568976  3 -    998990 ----GA----G---
i Bos_mutus.JH883513.1                                  I 1 C 0
s Bos_taurus.CM000177.6                                 136292331  3 - 158972876 ----GA----G---
i Bos_taurus.CM000177.6                                 I 1 C 0
s Bubalus_bubalis.KI419065.1                              1227952  3 -   1914593 ----GA----G---
i Bubalus_bubalis.KI419065.1                            I 1 C 0
s Cacajao_ayresi.k141_724503                               110184  6 -    171031 T---AA----GA-A
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                  9210  6 +    125063 T---AA----GA-A
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                11258  6 -    216513 T---AA----GA-A
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        3797  6 -    134917 T---AA----GA-A
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3216086  5 -   8989139 ----AA----GA-A
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           394273  2 -  15254737 ----AA--------
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2970007  5 +   6889770 ----AA----GA-A
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11515071  4 +  39901454 T---AA----G---
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   10088  4 +     87036 T---AA----G---
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11261730  4 -  35597290 T---AA----G---
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11084259  4 +  39895921 T---AA----G---
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16451293  4 -  44759192 T---AA----G---
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21321952  3 + 157394656 ----GA----G---
i Capra_aegagrus.CM003214.1                             I 1 C 0
s Capra_hircus.CM004562.1                               135703179  3 - 157403528 ----GA----G---
i Capra_hircus.CM004562.1                               I 1 C 0
s Capromys_pilorides.CapPil_scaffold_647363                   789  5 +      1887 ----AA----GA-A
i Capromys_pilorides.CapPil_scaffold_647363             C 0 C 0
s Carlito_syrichta.NW_007248099.1                          305557  6 +    345090 C---AA----GA-A
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               56487  3 +     67245 T---AA--------
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   155801  4 -    276539 T---AA----G---
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18886995  6 -  29618158 T---AA----GA-A
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 4541  6 -     26817 T---AA----GA-A
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                 8781  6 +     25043 T---AA----GA-A
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         4593  6 +     21754 C---AA----GA-A
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4359616  6 +   7569818 T---AA----GA-A
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_305802         1258  6 +      1857 T---AA----GA-A
i Ceratotherium_simum_cottoni.CerCot_scaffold_305802    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6551071  6 +   6739814 T---AA----AA-A
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      52548  6 -     54931 T---AA----GA-A
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         17532  6 -     19697 T---AA----GA-A
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         55063  6 -    107033 T---AA----GA-A
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        1506  6 -      3853 T---AA----GA-A
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          25438  6 +     30494 T---AA----GA-A
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           1461  6 -      4022 T---AA----GA-A
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          1353  6 -      3505 T---AA----GA-A
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           20162  5 +     35983 T---AA----GA--
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11985934  6 +  12117833 t---ga----ga-g
i Cercopithecus_albogularis.ctg51                             C 0 I 758
s Cercopithecus_mona.ctg12                               46473434  6 +  46592721 T---AA----GA-A
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      31261  6 +     33420 T---AA----GA-A
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        1297  6 -      3443 T---AA----GA-A
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      2288  6 -      4669 T---AA----GA-A
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        2092  5 -      4411 T---AA----GA--
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         1612  6 -      4205 T---AA----GA-A
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           55450  6 -     68416 T---AA----CA-A
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            4499  6 +     13308 T---AA----CA-A
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             1794  6 -     18223 T---AA----GA-A
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             18817  6 +     25473 T---AA----GA-A
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           37856  6 +     57117 T---AA----GA-A
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          42531  6 +     54541 T---AA----GA-A
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15957941  5 +  43084221 ----AA----CA-A
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         67405  6 +    196370 T---AA----GA-A
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          11579  6 +     40510 T---AA----GA-A
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15134892  6 -  15256731 T---AA----GA-A
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      29938  6 -     53260 T---AA----GA-A
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101140386  6 + 101219884 T---AA----GA-A
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                13487  5 -     21363 T---AA----GA--
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           758793  5 +    964067 T---AA----GA--
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_141308              5568  6 -     12508 T---AA----TA-T
i Chrysochloris_asiatica.ChrAsi_scaffold_141308         C 0 C 0
s Colobus_angolensis.KN985967.1                          10878968  6 +  10971483 C---AA----GA-A
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147660127  6 + 156195979 C---AA----GA-A
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            12112  6 +     23629 C---AA----GA-A
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 274056  2 -    399297 -----------A-A
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             15698  2 -     19186 -----------A-A
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         35886  3 -     40477 t---ga--------
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            48377  4 -     70449 T---AA----C---
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  204774  5 -    956709 ----AG----AA-A
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 26951  5 -     67205 ----AA----GA-A
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          178661  6 -   6883506 T---AA----GA-A
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16841324  6 +  31942871 T---AA----GA-A
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80033792  7 -  96802777 TAAGAA----G---
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18695794  3 -  18957592 T---AA--------
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 318924  6 +    993696 T---AA----GA-A
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_24487                 61079  6 +     62380 T---AA----GA-A
i Diceros_bicornis.DicBicMic_scaffold_24487             C 0 C 0
s Echinops_telfairi.JH980316.1                           22990820  6 -  44670279 C---AA----TA-A
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                  9176  3 +     24177 t---aa--------
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1488490  3 +   1727528 ----GA----G---
i Elaphurus_davidianus.JRFZ01086400.1                   I 1 C 0
s Elephantulus_edwardii.JH947210.1                        7803214  5 +  15467074 ----CA----TA-A
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        235704  2 -    369425 -----------A-A
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           2714  2 -      7838 -----------A-A
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85866992  4 +  99434291 T---CA----G---
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Equus_asinus.JREZ01000137.1                             2952184  6 -   4388051 T---AA----GA-A
i Equus_asinus.JREZ01000137.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13346195  6 +  41866177 T---AA----GA-A
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                           8187  6 +     92910 T---AA----GA-A
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erythrocebus_patas.Contig8                             48767071  6 -  48907691 T---AA----GA-A
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          311937  7 +    330699 TAAGAA----G---
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             58366  7 +     89355 TAAGAA----G---
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              1521  6 +     13586 T---AA----GA-A
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               1458  6 -      6809 T---AA----GA-A
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             7928  6 +     36558 T---AA----GA-A
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             4245  6 +     60246 T---AA----GA-A
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 7733  6 +    109717 T---AA----AA-A
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               12107  6 +     16540 T---AA----GA-A
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                12384  6 +     27497 T---AA----GA-A
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           14840  6 +     26808 T---AA----GA-A
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                29574  6 +     46535 T---AA----GA-A
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              12297  6 -     29447 T---AA----GA-A
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129889329  4 - 159252932 T---AA----C---
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129276403  4 - 158578461 T---AA----C---
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 17538  4 +     52776 T---AA----C---
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13889527  5 -  19261668 ----AA----GA-A
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     207467  6 -    847004 T---AA----GA-A
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                            9847  6 -     43889 T---AA----GA-A
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           6895  6 +     27357 T---AA----GA-A
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               152782  6 +    324696 T---AA----GA-A
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    178003  3 -    189561 ----GA----G---
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 1 C 0
s Glis_glis.GliGli_scaffold_79770                            9195  5 -     18683 ----AG----GA-A
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               1645  6 -     14630 T---AA----GA-A
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119648743  6 - 195582420 T---AA----GA-A
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   73754  5 +    118900 ----AA----GA-A
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                         2068  6 +      3980 T---AA----GA-A
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             24548  6 +     26611 T---AA----GA-A
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             2002  6 +     56096 T---AA----GA-A
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        25275  6 -     42470 T---AA----GA-A
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        41872  6 -     54384 T---AA----GA-A
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              13580  4 +     53719 T---AA----C---
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                24357  3 -     91191 ----GA----G---
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 1 C 0
s Heterocephalus_glaber.JH602058.1                        2547636  5 +  31725842 ----AA----GA-A
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               53052  6 +     73687 C---AT----GA-T
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              144062  7 +    277961 TAAGAA----G---
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      275486  3 -    477199 T---AA--------
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              4641  3 -      9143 T---AA--------
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg649                                    98317  6 +    115816 T---AA----GA-A
i Hoolock_leuconedys.ctg649                                C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 12648  4 -     67322 T---AA----C---
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hylobates_abbotti.k141_493872                              1454  6 +      5897 T---AA----GA-A
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_282275                                667  6 +      1846 T---AA----GA-A
i Hylobates_agilis.k141_282275                          C 0 C 0
s Hylobates_klossii.k141_466549                              7912  6 +     11537 T---AA----GA-A
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_muelleri.k141_1133650                             889  6 -      2775 T---AA----GA-A
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             29491  6 -     60944 T---AA----GA-A
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     2613  5 +     22540 ----AG----GA-A
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7122298  6 +  13083262 ----AA----GAAA
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_3334527                                   8512  6 +      9207 T---AA----CA-A
i Indri_indri.k141_3334527                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               5719  7 +     17520 TAAGAA----G---
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8561852  5 +  11848649 ----AA----CA-A
i Jaculus_jaculus.JH725517.1                            C 0 I 2
s Kogia_breviceps.KogBre_flattened_line_35920               20551  7 +     37189 TAAGAA----G---
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          46370  6 -    147782 T---AA----GA-A
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   110670  2 -    115756 T----A--------
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258403551  6 - 285822530 T---AA----GA-A
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        20445  6 +     39228 T---GA----CA-A
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            49821  6 +     63517 T---GA----CA-A
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        75041  6 +    116806 T---GA----CA-A
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     28082  6 -     33031 T---GA----CA-A
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3082351  4 -   3498232 T---AA----G---
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lipotes_vexillifer.KE558548.1                            132898  3 +   3060487 ----AA----G---
i Lipotes_vexillifer.KE558548.1                         I 3 C 0
s Lophocebus_aterrimus.ctg55                             19244157  6 +  19376315 T---AA----GA-A
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            7180  6 +     84689 T---AA----GA-A
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3774938  6 +   6799190 T---AA----GA-A
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20587628  6 -  62548349 T---AA----TA-A
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11083715  4 +  39895028 T---AA----G---
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             15843  6 +     74745 T---TA----GA-A
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12702349  6 +  12821369 T---TA----GA-A
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               4442  6 +      6569 T---TA----GA-A
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           42742  6 +     63263 T---TA----GA-A
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_1068107                               11319  6 +     12679 T---TA----GA-A
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                 892  6 +      3017 T---TA----GA-A
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  42504  6 -     79256 T---TA----GA-A
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196031424  6 + 196197964 T---TA----GA-A
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11441528  6 +  11645122 T---TA----GA-A
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   1454  6 -     46448 T---TA----GA-A
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                1281  6 -      3617 T---TA----GA-A
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 11614  6 -     55006 T---TA----GA-A
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43836653  6 +  43892939 T---TA----GA-A
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                3876  6 -      5978 T---TA----GA-A
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               1456  6 -     27140 T---TA----GA-A
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43433317  6 -  43563597 T---AA----GA-A
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4446143  6 -   4543643 T---AA----GA-A
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            142963  4 +    252755 T---AA----G---
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             33027  4 +     58827 T---AA----G---
i Manis_pentadactyla.KN017078.1                         I 1 C 0
s Marmota_marmota.CZRN01000005.1                         36870145  6 +  64221397 ----AA----GAAA
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       61467  2 -    234502 G---A---------
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 I 13
s Mellivora_capensis.MelCap_flattened_line_1828            224549  4 -    226874 T---CA----G---
i Mellivora_capensis.MelCap_flattened_line_1828         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233                8075  2 +     15977 -----------A-A
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1043000  2 -  26018355 -----------A-A
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_183284                    590  7 +      2166 TAAGAA----G---
i Mesoplodon_bidens.MesBid_scaffold_183284              C 0 C 0
s Microcebus_murinus.CM007691.1                          16506666  6 +  47401472 T---AA----CA-C
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  27768  6 -     48017 C---AA----TA-T
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22815359  2 -  98408828 -----------A-A
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               19643  3 -     32043 T---AA--------
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            31059  2 +     45743 T----A--------
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 I 1
s Miopithecus_ogouensis.k141_2666161                        31991  6 +     34273 T---AA----GA-A
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         7649  4 -    104932 T---AA----G---
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     2080  6 +      8497 T---AA----CA-A
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 143317  7 +    154973 TAAGAA----G---
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                157964  2 +    265003 T----A--------
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 1588  3 -      4346 ----GA----G---
i Moschus_moschiferus.MosMos_scaffold_146101            I 1 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  141270  4 -    168139 T---AA----C---
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Mus_caroli.LT608236.1                                  70761545  3 +  92629107 -----------aaa
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75484620  3 +  98207768 -----------aaa
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67549160  3 +  89017189 -----------aaa
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74324258  3 +  97876770 -----------AAA
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              7062  3 +     98495 ----------GA-A
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 2 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     86533  1 -    117718 -------------A
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 1 C 0
s Murina_feae.MurFea_scaffold_2254                          16178  2 -    100666 T----A--------
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mustela_putorius.JH417978.1                             4419402  3 -  28371801 T---CA--------
i Mustela_putorius.JH417978.1                           C 0 I 1
s Myotis_brandtii.KE161952.1                               964509  2 +   8389877 T----A--------
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5016186  2 +   6462685 T----A--------
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3462095  2 -   3747815 T----A--------
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         7292  2 +     66751 T----A--------
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             2046  6 -      8794 A---AA----GA-A
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            107418  2 +    362372 -----------a-a
i Nannospalax_galili.KL201303.1                         I 5 C 0
s Nasalis_larvatus.k141_153429                               4356  6 +     48152 C---AA----GA-A
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4481250  4 -  14209539 T---AA----G---
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3947926  7 -   4490290 TAAGAA----G---
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  46293  2 +     94413 ----AA--------
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1223136                          10123  6 -     11253 T---AA----GA-A
i Nomascus_annamensis.k141_1223136                      C 0 C 0
s Nomascus_concolor.k141_468488                               766  6 -      1482 T---AA----GA-A
i Nomascus_concolor.k141_468488                         C 0 C 0
s Nomascus_gabriellae.k141_906566                             755  6 -      2544 T---AA----GA-A
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             21229  6 -  18771707 T---AA----GA-A
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_844529                                   504  6 +      2124 T---AA----GA-A
i Nomascus_siki_a.k141_844529                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                26711  4 +   3668941 T---AA----G---
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65563526  6 -  95554990 T---AA----GA-A
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                             371  6 +      6470 T---AA----GA-A
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65665893  6 +  89412551 T---AA----GA-A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Octodon_degus.JH651621.1                                3675082  5 +  10294119 ----AA----GA-A
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             675909  4 -   3126709 T---AA----G---
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1076713  3 +   1425656 ----GA----G---
i Odocoileus_virginianus.KZ101650.1                     I 1 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         33875  3 +     78940 ----GA----G---
i Okapia_johnstoni.LVCL01S0017931.1                     I 1 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  121182  2 +    145789 -----------A-A
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  33118  2 +     62360 -----------A-A
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7221610  7 -   7562323 TAAGAA----G---
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              39841  6 -     66828 T---AA----TA-A
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      304046  4 -    505867 T---AA----G---
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       35535  6 +     38679 T---AA----GA-A
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18004973  6 -  38779656 T---AA----GA-A
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134074159  3 - 275406953 ----GA----G---
i Ovis_aries.CM001582.2                                 I 1 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      75373  3 +    140051 ----GA----G---
i Ovis_canadensis.OviCan_scaffold_6251                  I 1 C 0
s Pan_paniscus.CM003386.1                               127570987  6 - 205426864 T---AA----GA-A
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120148134  6 - 196562556 T---AA----GA-A
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  30492  4 +    295523 T---AA----C---
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3634096  4 +  18214204 T---AA----C---
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5023873  4 -   6340057 T---AA----C---
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1062874  3 -   1292953 ----GA----G---
i Pantholops_hodgsonii.KE114631.1                       I 1 C 0
s Papio_anubis.CM001492.2                               188152102  6 - 188283584 T---AA----GA-A
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            48314  6 +     76494 T---AA----GA-A
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47509498  6 +  47705337 T---AA----GA-A
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 63481  6 -    104429 T---AA----GA-A
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  13265  6 -     29451 T---AA----GA-A
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                33670  6 +     35859 T---AA----GA-A
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    111824  4 -    135482 T---AA----C---
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           1775  6 -     23713 T---AA----GA-C
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            21072  6 -     27972 t---AA----GA-C
i Perodicticus_potto.k141_713187                        C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4946287  2 -   8017169 -----------A-A
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            118227  7 -    122454 TAAGAA----G---
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           1357  6 -      3310 C---AA----GA-A
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       21263  6 -     82327 C---AA----GA-A
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           18014  6 +     19957 C---AA----GA-A
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26736023  6 +  26888534 C---AA----GA-A
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            93285  1 +    112873 T-------------
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             39897  6 -     61926 T---AA----GA-A
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        21326  6 +     78826 T---AA----GA-A
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              5277  6 -     15800 T---AA----GA-A
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                         8475  6 -     16101 T---AA----GA-A
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          1784  6 +      9673 T---AA----GA-A
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13470778  6 -  19735023 T---AA----GA-A
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                            9686  6 -     31692 T---AA----GA-A
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           2294  7 +     21690 TAAGAA----G---
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       19050  6 +     44506 T---AA----GA-A
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        19268  6 +     67491 T---AA----GA-A
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                       9513  6 -     98129 T---AA----GA-A
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     19113  6 +    147771 T---AA----GA-A
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        19364  6 -     23762 T---AA----GA-A
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_2078842                         19312  6 -     19696 T---AA----GA-A
i Plecturocebus_dubius.k141_2078842                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         19186  6 +    152463 T---AA----GA-A
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      5943  6 +      8943 T---AA----GA-A
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                          8903  6 +    134592 T---AA----GA-A
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          19496  6 -     75465 T---AA----GA-A
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              183540  6 -    373494 T---AA----GA-A
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19803444  6 +  19899266 T---AA----GA-A
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               1593  6 -     15069 C---AA----GA-A
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              1727  6 +     14865 C---AA----GA-A
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                72916  6 +     78963 C---AT----GA-T
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6844924  6 +  12164890 T---AA----GA-A
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     13359  6 -     30946 T---AA----CA-A
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_diadema.k141_577245                           39394  6 +     52369 T---AA----CA-A
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         31783  6 -     44753 T---AA----CA-A
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            13705  6 +     27322 T---AA----CA-A
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       13349  6 -     53241 T---AA----CA-A
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         35620  6 -     48185 T---AA----CA-A
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           29136  2 +     77221 -----------A-A
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                             854  3 -     27784 T---GA--------
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        241260  4 -    344369 T---CA----G---
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13242969  3 -  17261082 T---AA--------
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             600923  3 -   3946241 T---AA--------
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131530689  4 - 161321710 T---AA----C---
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             25718  6 +     56732 C---AA----GA-A
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6802208  6 +   6970761 C---AA----GA-A
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             1600  6 +     18040 C---AA----GA-A
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                12799  3 +     68503 ----GA----G---
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 1 C 0
s Rattus_norvegicus.chr11                                13911088  2 +  90463843 -----------A-A
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1784566  3 +   2252614 T---AA--------
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 I 3
s Rhinopithecus_bieti.k119_102124                           12155  6 -     14454 C---AA----GA-A
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206373481  6 - 206558726 C---AA----GA-A
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44851129  6 -  45163003 C---AA----GA-A
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                16272  3 +    109198 T---AA--------
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       4446  3 +     12214 ----GA----G---
i Saiga_tatarica.SaiTat_scaffold_82192                  I 1 C 0
s Saimiri_boliviensis.NW_024100938.1                     15668921  6 -  43202129 T---AA----GA-A
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                         796  6 +     34089 T---AA----GA-A
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                               727  6 -     60842 T---AA----GA-A
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                               796  6 +     67014 T---AA----GA-A
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                               796  6 +     60816 T---AA----GA-A
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                  724  6 -     76454 T---AA----GA-A
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17337304  6 -  30362882 T---AA----GA-A
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         16905  6 -     62485 T---AA----GA-A
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   28343  2 -    114521 -----------A-A
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1527475                       24143  6 +     26421 C---AA----GA-A
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       4605  6 +     20762 C---AA----GA-A
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         38338  6 +     40653 C---AA----GA-A
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                            8897  6 -     12194 C---AA----GA-A
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     22316  6 -     27512 C---AA----GA-A
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         31337  6 -     33692 C---AA----GA-A
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   94370  2 -    120886 -----------G-A
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            14567  2 +    739146 -----------A-A
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2236224  6 +   2842873 ----AA----GAAA
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             230975  1 -    276980 ----------C---
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            23937  4 +     62062 T---AA----C---
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189268863  4 + 218635234 T---AA----G---
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                     13898267  6 +  13920577 T---AA----GA-A
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               2781  3 -      6213 T---AA--------
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               11724  6 +     45698 A---AA----GA-A
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      803721  3 +   1148477 T---AA--------
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  54380  6 +     99546 T---AA----GA-A
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               23048  6 +     42269 C---AG----GC-A
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               56356  6 +     65473 C---AG----GC-A
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194003637  6 - 194193292 T---AA----GA-A
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                   586 10 +      6782 T---AAGAAAGA-A
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  132860  3 -    259118 T---AA--------
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        22715  6 +     38948 C---AA----GA-A
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   16442  6 -     32910 C---AA----GA-A
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       22340  6 +     24652 C---AA----GA-A
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      1225  6 -      3559 C---AA----GA-A
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           39164  6 -     54611 C---AA----GA-A
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       15163  6 +     17312 C---AA----GA-A
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    22533  6 -     25040 C---AA----GA-A
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          1199  6 +      3528 C---AA----GA-A
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  47561  6 +     51589 C---AA----GA-A
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       10729  6 +     14732 C---AA----GA-A
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       1207  6 -     28054 C---AA----GA-A
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44656002  6 -  44834318 C---AA----GA-A
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        1012  6 +      3372 C---AA----GA-A
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   2210  3 +     90398 ----GA----G---
i Tragulus_javanicus.TraJav_scaffold_14717              I 5 C 0
s Trichechus_manatus.JH594618.1                          16078304  6 +  31416278 T---AA----TA-A
i Trichechus_manatus.JH594618.1                         I 1 C 0
s Tupaia_chinensis.KB320831.1                             2787592  6 -   3938065 t---aG----TA-A
i Tupaia_chinensis.KB320831.1                           I 261 C 0
s Tupaia_tana.TupTan_flattened_line_68454                     434  6 +     13056 T---AG----TA-A
i Tupaia_tana.TupTan_flattened_line_68454               N 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69310328  7 -  96451834 TAAGAA----G---
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 23531  2 -     25548 -----------A-A
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6510958  4 +  28682327 T---AA----G---
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  1867  6 -     20643 T---AA----GT-A
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             21412  6 -     33872 T---AA----GA-A
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1521642  6 -   2331223 T---AA----GA-A
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                134111  4 -    281493 T---AA----G---
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       123423  6 -    134049 ----CA----AAAA
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        210637  4 -    227762 T---AA----G---
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     12262  5 -     20485 ----AA----CT-A
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 I 2
s Ziphius_cavirostris.ZipCav_flattened_line_127025           3831  7 -      8775 TAAGAA----G---
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Miniopterus_natalensis.LDJU01000022.1                   8206381  0 +  10048721 C
e Condylura_cristata.JH655880.1                          60609754  0 +  78930452 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16291  1 -    119109 I
e Hylobates_pileatus_b.LG03                                     92553610  0 - 189753342 C
e Dolichotis_patagonum.DolPat_scaffold_14102                33375  0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             56104 16 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                14631 16 +     26546 I
e Cricetulus_griseus.LT883672.1                          53025429  0 +  72327488 C
e Cavia_tschudii.CavTsc_scaffold_488                       173989  0 +    436027 C
e Cavia_porcellus.DS562889.1                             15795798  0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15783848 16 -  24422027 I
e Castor_canadensis.CasCan_scaffold_47037                   27024  0 +     33760 C
e Arctocebus_calabarensis.k141_1161114                      14526 30 +     17483 I

a score=0.000000
s hg38.chr4_GL000008v2_random                                8258 2 +    209709 G------T
s Acinonyx_jubatus.LLWD01000356.1                         2030353 1 +   3721120 -------A
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    108620 2 -    189883 G------A
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10653687 1 +  23371972 -------A
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7090189 1 -  16596857 -------A
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                    8897 2 -     22067 A------G
i Allactaga_bullata.AllBul_scaffold_70162               I 2 C 0
s Allenopithecus_nigroviridis.k141_3103707                  59281 2 +     61638 G------T
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        51089 2 +     53391 G------T
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         1813 2 +     72529 G------T
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          1389 2 +      3797 G------T
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             6483 2 -     18050 G------T
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  7600 2 -     11521 G------T
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              7158 2 -     21359 G------T
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1856473                                5541 2 +      7227 G------T
i Alouatta_juara.k141_1856473                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          6456 2 -     10438 G------T
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            3110 2 +      7047 G------T
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             6394 2 +     10410 G------T
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1374428                             197 2 -     25526 G------T
i Alouatta_puruensis.k141_1374428                       C 0 C 0
s Alouatta_seniculus.k141_990213                             3115 2 +      6429 G------T
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3516848 1 +   4113121 -------A
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      387310 2 -    631301 A------A
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            27756 1 +     33004 -------A
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 58788 2 +     78111 G------T
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            1719 2 +     22701 G------T
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5745679 2 +   9889416 G------T
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             2271 2 -    104377 G------T
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               2271 2 +     23246 G------T
i Aotus_vociferans.k141_718647                          C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 5409 2 -     29036 G------G
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9535533 2 +  39197703 G------T
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             56821 2 +     85812 G------T
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 7818 2 +     89302 G------T
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             12327 2 -     58268 G------T
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             60315 2 +    119057 G------T
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               2265 2 -     25888 G------T
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 3120 2 -     16375 G------G
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_767228                               9092 2 -      9688 G------G
i Avahi_peyrierasi.k141_767228                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26377060 1 +  51448160 -------A
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        2291 1 -     13118 -------A
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   39948 1 -     72089 -------A
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6556370 1 +   6870073 -------A
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138136601 1 - 161108492 -------A
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     568979 1 -    998990 -------A
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136292334 1 - 158972876 -------A
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1227955 1 -   1914593 -------A
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               110190 2 -    171031 G------T
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                  9216 2 +    125063 G------T
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                11264 2 -    216513 G------T
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        3803 2 -    134917 G------T
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3216091 2 -   8989139 G------A
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           394275 2 -  15254737 G------A
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2970012 2 +   6889770 G------A
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11515075 1 +  39901454 -------A
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   10092 1 +     87036 -------A
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11261734 1 -  35597290 -------A
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11084263 1 +  39895921 -------A
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16451297 1 -  44759192 -------A
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21321955 1 + 157394656 -------A
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135703182 1 - 157403528 -------A
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_647363                   794 2 +      1887 G------T
i Capromys_pilorides.CapPil_scaffold_647363             C 0 I 6
s Carlito_syrichta.NW_007248099.1                          305563 2 +    345090 G------G
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               56490 2 +     67245 G------A
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   155805 1 -    276539 -------A
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18887001 2 -  29618158 G------T
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 4547 2 -     26817 G------T
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                 8787 2 +     25043 G------T
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         4599 2 +     21754 G------G
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4359622 2 +   7569818 G------A
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_305802         1264 2 +      1857 G------A
i Ceratotherium_simum_cottoni.CerCot_scaffold_305802    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6551077 2 +   6739814 G------T
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      52554 2 -     54931 G------T
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         17538 2 -     19697 G------T
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         55069 2 -    107033 G------T
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        1512 2 -      3853 G------A
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          25444 2 +     30494 G------A
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           1467 2 -      4022 G------T
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          1359 2 -      3505 G------T
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_albogularis.ctg51                              11986698 2 +  12117833 g------a
i Cercopithecus_albogularis.ctg51                             I 758 C 0
s Cercopithecus_mona.ctg12                               46473440 2 +  46592721 G------A
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      31267 2 +     33420 G------A
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        1303 2 -      3443 G------A
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      2294 2 -      4669 G------A
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_roloway.k141_3372345                         1618 2 -      4205 G------T
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           55456 2 -     68416 G------G
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            4505 2 +     13308 G------G
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             1800 2 -     18223 G------T
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             18823 2 +     25473 G------T
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           37862 2 +     57117 G------T
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          42537 2 +     54541 G------T
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15957946 2 +  43084221 G------T
i Chinchilla_lanigera.JH721867.1                        C 0 I 6
s Chiropotes_israelita.k141_1189915                         67411 2 +    196370 G------T
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          11585 2 +     40510 G------T
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15134898 2 -  15256731 G------A
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      29944 2 -     53260 G------A
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101140392 2 + 101219884 G------A
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                13492 2 -     21363 G------G
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           758798 2 +    964067 G------G
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_141308              5574 2 -     12508 G------G
i Chrysochloris_asiatica.ChrAsi_scaffold_141308         C 0 C 0
s Colobus_angolensis.KN985967.1                          10878974 2 +  10971483 G------T
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147660133 2 + 156195979 G------T
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            12118 2 +     23629 G------T
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         35889 2 -     40477 g------a
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 274058 2 -    399297 G------G
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             15700 2 -     19186 G------G
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            48381 1 -     70449 -------A
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  204779 2 -    956709 G------G
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 26956 2 -     67205 G------T
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 I 6
s Dasypus_novemcinctus.JH568778.1                          178667 2 -   6883506 G------G
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16841330 2 +  31942871 G------G
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80033799 1 -  96802777 -------A
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18695797 2 -  18957592 G------A
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 318930 2 +    993696 G------A
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_24487                 61085 2 +     62380 C------A
i Diceros_bicornis.DicBicMic_scaffold_24487             C 0 C 0
s Echinops_telfairi.JH980316.1                           22990826 2 -  44670279 G------A
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                  9179 2 +     24177 g------a
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1488493 1 +   1727528 -------A
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7803219 1 +  15467074 -------G
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        235706 2 -    369425 G------G
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           2716 2 -      7838 G------G
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85866996 1 +  99434291 -------A
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Equus_asinus.JREZ01000137.1                             2952190 2 -   4388051 G------A
i Equus_asinus.JREZ01000137.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13346201 2 +  41866177 G------A
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                           8193 2 +     92910 G------A
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erythrocebus_patas.Contig8                             48767077 2 -  48907691 G------A
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          311944 1 +    330699 -------A
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             58373 1 +     89355 -------A
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              1527 2 +     13586 G------G
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               1464 2 -      6809 G------G
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             7934 2 +     36558 G------G
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             4251 2 +     60246 G------G
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 7739 2 +    109717 G------G
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               12113 2 +     16540 G------G
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                12390 2 +     27497 G------G
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           14846 2 +     26808 G------G
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                29580 2 +     46535 G------G
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              12303 2 -     29447 G------G
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129889333 1 - 159252932 -------A
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129276407 1 - 158578461 -------A
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 17542 1 +     52776 -------A
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13889532 8 -  19261668 GGGTTACT
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     207473 2 -    847004 G------G
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                            9853 2 -     43889 G------G
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           6901 2 +     27357 G------G
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               152788 2 +    324696 G------G
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    178006 1 -    189561 -------A
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                            9200 2 -     18683 G------G
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               1651 2 -     14630 G------T
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119648749 2 - 195582420 G------T
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   73759 2 +    118900 G------G
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                         2074 2 +      3980 G------G
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             24554 2 +     26611 G------G
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             2008 2 +     56096 G------G
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        25281 2 -     42470 G------G
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        41878 2 -     54384 G------G
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              13584 1 +     53719 -------A
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                24360 1 -     91191 -------A
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2547641 8 +  31725842 GGGTTACT
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               53058 2 +     73687 A------G
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              144069 1 +    277961 -------A
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      275489 2 -    477199 G------A
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              4644 2 -      9143 G------A
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg649                                    98323 2 +    115816 G------T
i Hoolock_leuconedys.ctg649                                C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 12652 1 -     67322 -------A
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hylobates_abbotti.k141_493872                              1460 2 +      5897 G------T
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_282275                                673 2 +      1846 G------T
i Hylobates_agilis.k141_282275                          C 0 C 0
s Hylobates_klossii.k141_466549                              7918 2 +     11537 G------T
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_muelleri.k141_1133650                             895 2 -      2775 G------T
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             29497 1 -     60944 G-------
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     2618 1 +     22540 G-------
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7122304 2 +  13083262 G------A
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_3334527                                   8518 2 +      9207 G------G
i Indri_indri.k141_3334527                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               5726 1 +     17520 -------A
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8561859 2 +  11848649 A------G
i Jaculus_jaculus.JH725517.1                            I 2 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               20558 1 +     37189 -------A
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          46376 2 -    147782 G------T
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   110672 2 -    115756 G------A
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258403557 2 - 285822530 G------G
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        20451 2 +     39228 G------G
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            49827 2 +     63517 G------G
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        75047 2 +    116806 G------G
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     28088 2 -     33031 G------G
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3082355 1 -   3498232 -------A
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lipotes_vexillifer.KE558548.1                            132901 1 +   3060487 -------A
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19244163 2 +  19376315 G------T
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            7186 2 +     84689 G------G
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3774944 2 +   6799190 G------G
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20587634 2 -  62548349 A------G
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11083719 1 +  39895028 -------A
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             15849 2 +     74745 G------T
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12702355 2 +  12821369 G------T
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               4448 2 +      6569 G------T
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           42748 2 +     63263 G------T
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_1068107                               11325 2 +     12679 G------T
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                 898 2 +      3017 G------T
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  42510 2 -     79256 G------T
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196031430 2 + 196197964 G------T
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11441534 2 +  11645122 G------T
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   1460 2 -     46448 G------T
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                1287 2 -      3617 G------T
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 11620 2 -     55006 G------T
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43836659 2 +  43892939 G------T
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                3882 2 -      5978 G------T
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               1462 2 -     27140 G------T
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43433323 2 -  43563597 G------T
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4446149 2 -   4543643 G------T
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            142967 1 +    252755 -------A
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             33031 1 +     58827 -------A
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36870151 2 +  64221397 G------A
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_1828            224553 1 -    226874 -------A
i Mellivora_capensis.MelCap_flattened_line_1828         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233                8077 2 +     15977 G------G
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1043002 2 -  26018355 G------G
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_183284                    597 1 +      2166 -------A
i Mesoplodon_bidens.MesBid_scaffold_183284              C 0 C 0
s Microcebus_murinus.CM007691.1                          16506672 2 +  47401472 A------G
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  27774 2 -     48017 G------A
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               19646 2 -     32043 G------A
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22815361 2 -  98408828 G------G
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8206381 2 +  10048721 C------A
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            31062 2 +     45743 C------A
i Miniopterus_schreibersii.MinSch_scaffold_24116        I 1 C 0
s Miopithecus_ogouensis.k141_2666161                        31997 2 +     34273 G------T
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         7653 1 -    104932 -------A
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     2086 2 +      8497 G------G
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 143324 1 +    154973 -------A
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                157966 2 +    265003 G------A
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 1591 1 -      4346 -------A
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  141274 1 -    168139 -------A
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          16180 2 -    100666 G------A
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70761548 2 +  92629107 g------g
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75484623 2 +  98207768 g------g
i Mus_musculus.chr16                                    C 0 I 219
s Mus_pahari.LT608305.1                                  67549163 2 +  89017189 g------g
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74324261 2 +  97876770 G------G
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              7065 2 +     98495 G------G
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4419406 1 -  28371801 -------A
i Mustela_putorius.JH417978.1                           I 1 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     86534 2 -    117718 G------T
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 I 6
s Myotis_brandtii.KE161952.1                               964511 2 +   8389877 G------A
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5016188 2 +   6462685 G------A
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3462097 2 -   3747815 G------A
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         7294 2 +     66751 T------A
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             2052 2 -      8794 G------A
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            107420 2 +    362372 a------a
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               4362 2 +     48152 G------T
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4481254 1 -  14209539 -------A
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3947933 1 -   4490290 -------A
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  46295 2 +     94413 A------A
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1223136                          10129 2 -     11253 G------T
i Nomascus_annamensis.k141_1223136                      C 0 C 0
s Nomascus_concolor.k141_468488                               772 2 -      1482 G------T
i Nomascus_concolor.k141_468488                         C 0 C 0
s Nomascus_gabriellae.k141_906566                             761 2 -      2544 G------T
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             21235 2 -  18771707 G------T
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_844529                                   510 2 +      2124 G------T
i Nomascus_siki_a.k141_844529                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                26715 1 +   3668941 -------A
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65563532 2 -  95554990 G------G
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                             377 2 +      6470 G------G
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65665899 2 +  89412551 G------G
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Octodon_degus.JH651621.1                                3675087 2 +  10294119 G------T
i Octodon_degus.JH651621.1                              C 0 I 8
s Odobenus_rosmarus.KB229369.1                             675913 1 -   3126709 -------A
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1076716 1 +   1425656 -------A
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         33878 1 +     78940 -------A
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  121184 2 +    145789 G------G
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  33120 2 +     62360 G------T
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7221617 1 -   7562323 -------A
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              39847 2 -     66828 G------G
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      304050 1 -    505867 -------A
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       35541 2 +     38679 G------G
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18004979 2 -  38779656 G------G
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134074162 1 - 275406953 -------A
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      75376 1 +    140051 -------A
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127570993 2 - 205426864 G------T
i Pan_paniscus.CM003386.1                               C 0 I 5
s Pan_troglodytes.CM009241.2                            120148140 2 - 196562556 G------T
i Pan_troglodytes.CM009241.2                            C 0 I 5
s Panthera_onca.PanOnc_flattened_line_1615                  30496 1 +    295523 -------A
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3634100 1 +  18214204 -------A
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5023877 1 -   6340057 -------A
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1062877 1 -   1292953 -------A
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188152108 2 - 188283584 G------T
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            48320 2 +     76494 G------T
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47509504 2 +  47705337 G------T
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 63487 2 -    104429 G------T
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  13271 2 -     29451 G------T
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                33676 2 +     35859 G------T
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    111828 1 -    135482 -------A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4946289 2 -   8017169 G------G
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            118234 1 -    122454 -------A
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           1363 2 -      3310 G------T
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       21269 2 -     82327 G------T
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           18020 2 +     19957 G------T
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26736029 2 +  26888534 G------T
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pithecia_albicans.k141_991845                             39903 2 -     61926 G------G
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        21332 2 +     78826 G------G
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              5283 2 -     15800 G------G
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                         8481 2 -     16101 G------G
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          1790 2 +      9673 G------G
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13470784 2 -  19735023 G------G
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                            9692 2 -     31692 G------G
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           2301 1 +     21690 -------A
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       19056 2 +     44506 G------T
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        19274 2 +     67491 G------T
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                       9519 2 -     98129 G------T
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     19119 2 +    147771 G------T
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        19370 2 -     23762 G------T
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_2078842                         19318 2 -     19696 G------T
i Plecturocebus_dubius.k141_2078842                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         19192 2 +    152463 G------T
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      5949 2 +      8943 G------T
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                          8909 2 +    134592 G------T
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          19502 2 -     75465 G------T
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              183546 2 -    373494 G------T
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19803450 2 +  19899266 G------T
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               1599 2 -     15069 G------T
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              1733 2 +     14865 G------T
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                72922 2 +     78963 A------G
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6844930 2 +  12164890 G------G
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     13365 2 -     30946 G------G
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_diadema.k141_577245                           39400 2 +     52369 G------G
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         31789 2 -     44753 G------G
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            13711 2 +     27322 G------G
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       13355 2 -     53241 G------G
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         35626 2 -     48185 G------G
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           29138 2 +     77221 G------G
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                             857 2 -     27784 G------A
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        241264 1 -    344369 -------A
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13242972 2 -  17261082 G------A
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             600926 2 -   3946241 G------A
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131530693 1 - 161321710 -------A
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             25724 2 +     56732 G------T
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6802214 2 +   6970761 G------T
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             1606 2 +     18040 G------T
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                12802 1 +     68503 -------A
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13911090 2 +  90463843 G------G
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1784572 2 +   2252614 G------A
i Rhinolophus_sinicus.LVEH01000179.1                    I 3 C 0
s Rhinopithecus_bieti.k119_102124                           12161 2 -     14454 G------T
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206373487 2 - 206558726 G------T
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44851135 2 -  45163003 G------T
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                16275 2 +    109198 G------A
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       4449 1 +     12214 -------A
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15668927 2 -  43202129 G------T
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                         802 2 +     34089 G------T
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                               733 2 -     60842 G------T
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                               802 2 +     67014 G------T
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                               802 2 +     60816 G------T
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                  730 2 -     76454 G------T
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17337310 2 -  30362882 G------T
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         16911 2 -     62485 G------T
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   28345 2 -    114521 G------A
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 I 2
s Semnopithecus_entellus.k141_1527475                       24149 2 +     26421 G------T
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       4611 2 +     20762 G------T
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         38344 2 +     40653 G------T
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                            8903 2 -     12194 G------T
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     22322 2 -     27512 G------T
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         31343 2 -     33692 G------T
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   94372 2 -    120886 A------G
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            14569 2 +    739146 G------A
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2236230 2 +   2842873 G------A
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             230976 1 -    276980 -------A
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            23941 1 +     62062 -------A
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189268867 1 + 218635234 -------A
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                     13898273 2 +  13920577 G------T
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               2784 2 -      6213 G------A
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               11730 2 +     45698 G------A
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      803724 2 +   1148477 G------A
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  54386 2 +     99546 G------A
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               23054 2 +     42269 G------G
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               56362 2 +     65473 G------G
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194003643 2 - 194193292 G------T
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                   596 2 +      6782 G------A
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  132863 2 -    259118 G------A
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        22721 2 +     38948 G------T
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   16448 2 -     32910 G------T
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       22346 2 +     24652 G------T
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      1231 2 -      3559 G------T
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           39170 2 -     54611 G------T
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       15169 2 +     17312 G------T
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    22539 2 -     25040 G------T
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          1205 2 +      3528 G------T
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  47567 2 +     51589 G------T
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       10735 2 +     14732 G------T
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       1213 2 -     28054 G------T
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44656008 2 -  44834318 G------T
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        1018 2 +      3372 G------T
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   2213 1 +     90398 -------A
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16078310 2 +  31416278 A------G
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2787598 2 -   3938065 G------A
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                     440 2 +     13056 G------A
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69310335 1 -  96451834 -------A
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 23533 2 -     25548 G------A
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6510962 1 +  28682327 -------A
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  1873 2 -     20643 G------G
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             21418 2 -     33872 G------G
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1521648 2 -   2331223 G------A
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                134115 1 -    281493 -------A
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       123429 2 -    134049 G------A
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        210641 1 -    227762 -------A
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     12269 2 -     20485 A------G
i Zapus_hudsonius.ZapHud_scaffold_64392                 I 2 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           3838 1 -      8775 -------A
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            93286 0 +    112873 C
e Megaderma_lyra.MegLyr_scaffold_3562                       61469 13 -    234502 I
e Condylura_cristata.JH655880.1                          60609754 0 +  78930452 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16291 1 -    119109 I
e Hylobates_pileatus_b.LG03                                     92553610 0 - 189753342 C
e Perodicticus_potto.k141_713187                            21078 0 -     27972 C
e Perodicticus_ibeanus.k141_117958                           1781 0 -     23713 C
e Dolichotis_patagonum.DolPat_scaffold_14102                33375 0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             56104 16 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                14631 16 +     26546 I
e Cricetulus_griseus.LT883672.1                          53025429 0 +  72327488 C
e Cercopithecus_pogonias.k141_1977419                        2097 0 -      4411 C
e Cercopithecus_lowei.k141_623764                           20167 0 +     35983 C
e Cavia_tschudii.CavTsc_scaffold_488                       173989 0 +    436027 C
e Cavia_porcellus.DS562889.1                             15795798 0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15783848 16 -  24422027 I
e Castor_canadensis.CasCan_scaffold_47037                   27024 0 +     33760 C
e Arctocebus_calabarensis.k141_1161114                      14526 30 +     17483 I

a score=0.000000
s hg38.chr4_GL000008v2_random                                8260 5 +    209709 TTTAC
s Acinonyx_jubatus.LLWD01000356.1                         2030354 5 +   3721120 TTTGC
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    108622 5 -    189883 TTCAT
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10653688 5 +  23371972 TTTAC
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7090190 5 -  16596857 CTTAC
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                    8899 5 -     22067 TTTAT
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_3103707                  59283 5 +     61638 TTTTC
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        51091 5 +     53391 TTTTC
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         1815 5 +     72529 TTTTC
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          1391 5 +      3797 TTTTC
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             6485 5 -     18050 TTTAC
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  7602 5 -     11521 TTTAC
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              7160 5 -     21359 TTTAC
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1856473                                5543 5 +      7227 TTTAC
i Alouatta_juara.k141_1856473                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          6458 5 -     10438 TTTAC
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            3112 5 +      7047 TTTAC
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             6396 5 +     10410 TTTAC
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1374428                             199 5 -     25526 TTTAC
i Alouatta_puruensis.k141_1374428                       C 0 C 0
s Alouatta_seniculus.k141_990213                             3117 5 +      6429 TTTAC
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3516849 5 +   4113121 TTTAC
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      387312 5 -    631301 TTTAT
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            27757 5 +     33004 TTTAC
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 58790 5 +     78111 TTTAC
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            1721 5 +     22701 TTTAC
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5745681 5 +   9889416 TTTAC
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             2273 5 -    104377 TTTAC
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               2273 5 +     23246 TTTAC
i Aotus_vociferans.k141_718647                          C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 5411 5 -     29036 TTTAT
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9535535 5 +  39197703 TTTAC
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             56823 5 +     85812 TTTAC
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 7820 5 +     89302 TTTAC
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             12329 5 -     58268 TTTAC
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             60317 5 +    119057 TTTAC
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               2267 5 -     25888 TTTAC
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 3122 5 -     16375 TTTAC
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_767228                               9094 5 -      9688 TTTAC
i Avahi_peyrierasi.k141_767228                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26377061 5 +  51448160 CTGAC
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        2292 5 -     13118 CTGAC
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   39949 5 -     72089 TTTAC
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6556371 5 +   6870073 CTTAC
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138136602 5 - 161108492 TTTAC
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     568980 5 -    998990 TTTAC
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136292335 5 - 158972876 TTTAC
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1227956 5 -   1914593 TTTAC
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               110192 4 -    171031 TTTA-
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                  9218 4 +    125063 TTTA-
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                11266 4 -    216513 TTTA-
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        3805 4 -    134917 TTTA-
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3216093 5 -   8989139 TTTAC
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           394277 5 -  15254737 TTTAC
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2970014 5 +   6889770 TTTAC
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11515076 5 +  39901454 TTTAC
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   10093 5 +     87036 TTTAC
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11261735 5 -  35597290 TTTAC
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11084264 5 +  39895921 TTTAC
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16451298 5 -  44759192 TTTAC
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21321956 5 + 157394656 TTTAC
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135703183 5 - 157403528 TTTAC
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          305565 5 +    345090 TTTAC
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               56492 5 +     67245 TTTAT
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   155806 5 -    276539 TTTAC
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18887003 5 -  29618158 TTTAC
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 4549 5 -     26817 TTTAC
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                 8789 5 +     25043 TTTAC
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         4601 5 +     21754 TTTAC
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4359624 5 +   7569818 TTTAC
i Ceratotherium_simum.JH767818.1                        C 0 I 651
s Ceratotherium_simum_cottoni.CerCot_scaffold_305802         1266 5 +      1857 TTTAC
i Ceratotherium_simum_cottoni.CerCot_scaffold_305802    C 0 N 0
s Cercocebus_atys.KQ010443.1                              6551079 5 +   6739814 TTTTC
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      52556 5 -     54931 TTTTC
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         17540 5 -     19697 TTTTC
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         55071 5 -    107033 TTTTC
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        1514 5 -      3853 TTTTC
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          25446 5 +     30494 TTTTC
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           1469 5 -      4022 TTTTC
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          1361 5 -      3505 TTTTC
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           20167 5 +     35983 TTTTC
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11986700 1 +  12117833 t----
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46473442 5 +  46592721 TTTTC
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      31269 5 +     33420 TTTTC
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        1305 5 -      3443 TTTTC
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      2296 5 -      4669 TTTTC
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        2097 5 -      4411 TTTTC
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         1620 5 -      4205 TTTTC
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           55458 5 -     68416 TTTAT
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            4507 5 +     13308 TTTAT
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             1802 5 -     18223 TTTAC
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             18825 5 +     25473 TTTAC
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           37864 5 +     57117 TTTAC
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          42539 5 +     54541 TTTAC
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chiropotes_israelita.k141_1189915                         67413 4 +    196370 TTTA-
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          11587 4 +     40510 TTTA-
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15134900 5 -  15256731 TTTTC
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      29946 5 -     53260 TTTTC
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101140394 5 + 101219884 TTTTC
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                13494 5 -     21363 TTTAT
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           758800 5 +    964067 TTTAT
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_141308              5576 5 -     12508 TTTTN
i Chrysochloris_asiatica.ChrAsi_scaffold_141308         C 0 C 0
s Colobus_angolensis.KN985967.1                          10878976 5 +  10971483 TTTTC
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147660135 5 + 156195979 TTTTC
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            12120 5 +     23629 TTTTC
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60609754 5 +  78930452 CTGAC
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         35891 5 -     40477 attac
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 274060 5 -    399297 TTTGT
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             15702 5 -     19186 TTTAT
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            48382 5 -     70449 TTTAC
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  204781 5 -    956709 TTTAA
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          178669 5 -   6883506 TTTAT
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16841332 5 +  31942871 TTTAC
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80033800 5 -  96802777 CTGAC
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18695799 5 -  18957592 TTTAT
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 318932 5 +    993696 TTTAC
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_24487                 61087 5 +     62380 TTTAC
i Diceros_bicornis.DicBicMic_scaffold_24487             C 0 N 0
s Echinops_telfairi.JH980316.1                           22990828 5 -  44670279 TTTAT
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                  9181 5 +     24177 tttat
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1488494 5 +   1727528 TTTAC
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7803220 5 +  15467074 TTTAT
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        235708 5 -    369425 CTTAT
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           2718 5 -      7838 TTTAT
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85866997 5 +  99434291 TCTAC
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Equus_asinus.JREZ01000137.1                             2952192 5 -   4388051 TTTAC
i Equus_asinus.JREZ01000137.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13346203 5 +  41866177 TTTAC
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                           8195 5 +     92910 TTTAC
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erythrocebus_patas.Contig8                             48767079 5 -  48907691 TTTTC
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          311945 5 +    330699 CTGAC
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             58374 5 +     89355 CTGAC
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              1529 5 +     13586 TTTAC
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               1466 5 -      6809 TTTAC
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             7936 5 +     36558 TTTAC
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             4253 5 +     60246 TTTAC
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 7741 5 +    109717 TTTAC
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               12115 5 +     16540 TTTAC
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                12392 5 +     27497 TTTAC
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           14848 5 +     26808 TTTAC
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                29582 5 +     46535 TTTAC
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              12305 5 -     29447 TTTAC
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129889334 5 - 159252932 TTTGC
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129276408 5 - 158578461 TTTGC
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 17543 5 +     52776 TTTGC
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Galago_moholi.ctg555                                     207475 5 -    847004 TTTAC
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                            9855 5 -     43889 TTTAC
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           6903 5 +     27357 TTTAC
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               152790 5 +    324696 TTTCC
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    178007 5 -    189561 TTTGC
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                            9202 5 -     18683 TTTAC
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               1653 5 -     14630 TTCAC
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119648751 5 - 195582420 TTCAC
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   73761 5 +    118900 TTTAC
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                         2076 5 +      3980 TTTCC
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             24556 5 +     26611 TTTAC
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             2010 5 +     56096 TTTCC
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        25283 5 -     42470 TTTCC
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        41880 5 -     54384 TTTCC
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              13585 5 +     53719 TTTAC
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                24361 5 -     91191 TTTAC
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               53060 5 +     73687 TTTAT
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              144070 5 +    277961 CTTAC
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      275491 5 -    477199 ATTAC
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              4646 5 -      9143 ATTAC
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg649                                    98325 5 +    115816 TTTAC
i Hoolock_leuconedys.ctg649                                C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 12653 5 -     67322 CTTAC
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hylobates_abbotti.k141_493872                              1462 5 +      5897 TTTAC
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_282275                                675 5 +      1846 TTTAC
i Hylobates_agilis.k141_282275                          C 0 C 0
s Hylobates_klossii.k141_466549                              7920 5 +     11537 TTTAC
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_muelleri.k141_1133650                             897 5 -      2775 TTTAC
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7122306 5 +  13083262 TTTTC
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_3334527                                   8520 5 +      9207 TTTAC
i Indri_indri.k141_3334527                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               5727 5 +     17520 CTGAC
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8561861 5 +  11848649 CTTAT
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               20559 5 +     37189 CTGAC
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          46378 5 -    147782 TTTAC
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   110674 5 -    115756 TTTAC
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258403559 5 - 285822530 TTTAC
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        20453 5 +     39228 TTTAC
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            49829 5 +     63517 TTTAC
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        75049 5 +    116806 TTTAC
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     28090 5 -     33031 TTTAC
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3082356 5 -   3498232 TTTAC
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lipotes_vexillifer.KE558548.1                            132902 5 +   3060487 CTGAC
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19244165 5 +  19376315 TTTTC
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            7188 5 +     84689 TTTAC
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3774946 5 +   6799190 TTTAC
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20587636 5 -  62548349 TTTAT
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11083720 5 +  39895028 TTTAC
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             15851 5 +     74745 TTTTC
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12702357 5 +  12821369 TTTTC
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               4450 5 +      6569 TTTTC
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           42750 5 +     63263 TTTTC
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_1068107                               11327 5 +     12679 TTTTC
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                 900 5 +      3017 TTTTC
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  42512 5 -     79256 TTTTC
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196031432 5 + 196197964 TTTTC
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11441536 5 +  11645122 TTTTC
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   1462 5 -     46448 TTTTC
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                1289 5 -      3617 TTTTC
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 11622 5 -     55006 TTTTC
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43836661 5 +  43892939 TTTTC
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                3884 5 -      5978 TTTTC
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               1464 5 -     27140 TTTTC
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43433325 5 -  43563597 TTTTC
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4446151 5 -   4543643 TTTTC
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            142968 5 +    252755 TTTAT
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             33032 5 +     58827 TTTAT
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36870153 5 +  64221397 GTTTC
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_1828            224554 5 -    226874 TCTAC
i Mellivora_capensis.MelCap_flattened_line_1828         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233                8079 5 +     15977 TTCAT
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1043004 5 -  26018355 TTTAT
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_183284                    598 5 +      2166 CTGAC
i Mesoplodon_bidens.MesBid_scaffold_183284              C 0 C 0
s Microcebus_murinus.CM007691.1                          16506674 5 +  47401472 TTTAC
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  27776 5 -     48017 TAAAT
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               19648 5 -     32043 TTTAT
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22815363 5 -  98408828 TTTAT
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8206383 5 +  10048721 TTTAC
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            31064 5 +     45743 TTTAC
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        31999 5 +     34273 TTTTC
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         7654 5 -    104932 TTTAC
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     2088 5 +      8497 TTTAC
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 143325 5 +    154973 CTGAC
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                157968 5 +    265003 CTTGT
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 1592 5 -      4346 TTTAC
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  141275 5 -    168139 TTTAC
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          16182 5 -    100666 TTTAC
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70761550 5 +  92629107 tttat
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75484844 5 +  98207768 tttat
i Mus_musculus.chr16                                    I 219 C 0
s Mus_pahari.LT608305.1                                  67549165 5 +  89017189 tttat
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74324263 5 +  97876770 TTCAT
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              7067 5 +     98495 TATAC
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4419407 5 -  28371801 GCTAC
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myotis_brandtii.KE161952.1                               964513 5 +   8389877 TTTAC
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5016190 5 +   6462685 TTTAC
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3462099 5 -   3747815 TTTAC
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         7296 5 +     66751 TTTAC
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             2054 5 -      8794 TTTAT
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            107422 5 +    362372 tttat
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               4364 5 +     48152 TTTTC
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4481255 5 -  14209539 TTTAC
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3947934 5 -   4490290 CTGAC
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  46297 5 +     94413 TTTAT
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1223136                          10131 5 -     11253 TCTAC
i Nomascus_annamensis.k141_1223136                      C 0 C 0
s Nomascus_concolor.k141_468488                               774 5 -      1482 TCTAC
i Nomascus_concolor.k141_468488                         C 0 C 0
s Nomascus_gabriellae.k141_906566                             763 5 -      2544 TCTAC
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             21237 5 -  18771707 TCTAC
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_844529                                   512 5 +      2124 TCTAC
i Nomascus_siki_a.k141_844529                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                26716 5 +   3668941 TTTAC
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65563534 5 -  95554990 TTTAC
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                             379 5 +      6470 TTTAC
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65665901 5 +  89412551 TTTAC
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Odobenus_rosmarus.KB229369.1                             675914 5 -   3126709 TTTAC
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1076717 5 +   1425656 TTTAC
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         33879 5 +     78940 TTTAG
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  121186 5 +    145789 TTTAT
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  33122 5 +     62360 TTTAT
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7221618 5 -   7562323 CTGAC
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              39849 5 -     66828 TTTAT
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      304051 5 -    505867 TTTAC
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       35543 5 +     38679 TTTAC
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18004981 5 -  38779656 TTTAC
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134074163 5 - 275406953 TTTAC
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      75377 5 +    140051 TTTAC
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.AJFE02000950.1                                 130 5 -      1008 TTTAC
i Pan_paniscus.AJFE02000950.1                           I 94 I 24
s Pan_troglodytes.KZ622857.1                               323982 5 +    772158 TTTAC
i Pan_troglodytes.KZ622857.1                            I 1678 I 24
s Panthera_onca.PanOnc_flattened_line_1615                  30497 5 +    295523 TTTGC
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3634101 5 +  18214204 TTTGC
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5023878 5 -   6340057 TTTGC
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1062878 5 -   1292953 TTTAC
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188152110 5 - 188283584 TTTTC
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            48322 5 +     76494 TTTTC
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47509506 5 +  47705337 TTTTC
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 63489 5 -    104429 TTTTC
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  13273 5 -     29451 TTTTC
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                33678 5 +     35859 TTTTC
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    111829 5 -    135482 TTTAC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4946291 5 -   8017169 TTTAT
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            118235 5 -    122454 CTGAC
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           1365 5 -      3310 TTTTC
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       21271 5 -     82327 TTTTC
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           18022 5 +     19957 TTTTC
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26736031 5 +  26888534 TTTTC
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pithecia_albicans.k141_991845                             39905 4 -     61926 TTTA-
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        21334 4 +     78826 TTTA-
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              5285 4 -     15800 TTTA-
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                         8483 4 -     16101 TTTA-
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          1792 4 +      9673 TTTA-
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13470786 4 -  19735023 TTTA-
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                            9694 4 -     31692 TTTA-
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           2302 5 +     21690 CTGAC
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       19058 5 +     44506 TTTAC
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        19276 5 +     67491 TTTAC
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                       9521 5 -     98129 TTTAC
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     19121 5 +    147771 TTTAC
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        19372 5 -     23762 TTTAC
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_2078842                         19320 5 -     19696 TTTAC
i Plecturocebus_dubius.k141_2078842                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         19194 5 +    152463 TTTAC
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      5951 5 +      8943 TTTAC
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                          8911 5 +    134592 TTTAC
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          19504 5 -     75465 TTTAC
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              183548 5 -    373494 TTTAC
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19803452 5 +  19899266 TTTAC
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               1601 5 -     15069 TTTTC
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              1735 5 +     14865 TTTTC
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                72924 5 +     78963 TTTAT
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6844932 5 +  12164890 TTTAC
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     13367 5 -     30946 TTTAC
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_diadema.k141_577245                           39402 5 +     52369 TTTAC
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         31791 5 -     44753 TTTAC
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            13713 5 +     27322 TTTAC
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       13357 5 -     53241 TTTAC
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         35628 5 -     48185 TTTAC
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           29140 5 +     77221 TTCAA
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                             859 5 -     27784 CTTAT
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        241265 5 -    344369 TCTAC
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13242974 5 -  17261082 TTTAC
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             600928 5 -   3946241 TTTAC
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131530694 5 - 161321710 TTTGC
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             25726 5 +     56732 TTTTC
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6802216 5 +   6970761 TTTTC
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             1608 5 +     18040 TTTTC
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                12803 5 +     68503 TTTAC
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13911092 5 +  90463843 TTTAT
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1784574 5 +   2252614 ATTAA
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           12163 5 -     14454 TTTTC
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206373489 5 - 206558726 TTTTC
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44851137 5 -  45163003 TTTTC
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                16277 5 +    109198 TTTAC
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       4450 5 +     12214 TTTAC
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15668929 5 -  43202129 TTTAC
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                         804 5 +     34089 TTTAC
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                               735 5 -     60842 TTTAC
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                               804 5 +     67014 TTTAC
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                               804 5 +     60816 TTTAC
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                  732 5 -     76454 TTTAC
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17337312 5 -  30362882 TTTAC
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         16913 5 -     62485 TTTAC
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   28349 5 -    114521 ATTGC
i Scalopus_aquaticus.ScaAqu_scaffold_9300               I 2 C 0
s Semnopithecus_entellus.k141_1527475                       24151 5 +     26421 TTTTC
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       4613 5 +     20762 TTTTC
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         38346 5 +     40653 TTTTC
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                            8905 5 -     12194 TTTTC
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     22324 5 -     27512 TTTTC
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         31345 5 -     33692 TTTTC
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   94374 5 -    120886 TTTAT
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            14571 5 +    739146 TTTAC
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2236232 5 +   2842873 TTTCC
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             230977 5 -    276980 TTTGC
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            23942 5 +     62062 TTTAC
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189268868 5 + 218635234 TTTAC
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                     13898275 5 +  13920577 TTTAC
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               2786 5 -      6213 TTCAC
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               11732 5 +     45698 TTTAT
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      803726 5 +   1148477 TTTAC
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  54388 5 +     99546 TTTAC
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               23056 5 +     42269 TTTAC
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               56364 5 +     65473 TTTAC
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194003645 5 - 194193292 TTTTC
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                   598 5 +      6782 TTTAT
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  132865 5 -    259118 TATAT
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        22723 5 +     38948 TTTTC
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   16450 5 -     32910 TTTTC
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       22348 5 +     24652 TTTTC
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      1233 5 -      3559 TTTTC
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           39172 5 -     54611 TTTTC
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       15171 5 +     17312 TTTTC
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    22541 5 -     25040 TTTTC
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          1207 5 +      3528 TTTTC
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  47569 5 +     51589 TTTTC
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       10737 5 +     14732 TTTTC
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       1215 5 -     28054 TTTTC
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44656010 5 -  44834318 TTTTC
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        1020 5 +      3372 TTTTC
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   2214 5 +     90398 TTTAC
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16078312 5 +  31416278 CTTAT
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2787600 5 -   3938065 TTTAC
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                     442 5 +     13056 TTTAC
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69310336 5 -  96451834 CTGAC
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 23535 5 -     25548 TTGGT
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6510963 5 +  28682327 TTTAC
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  1875 5 -     20643 TTTAC
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             21420 5 -     33872 TTTAC
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1521650 5 -   2331223 TTTAC
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                134116 5 -    281493 TTTAC
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       123431 5 -    134049 TTTAC
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        210642 5 -    227762 TTTAC
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     12271 5 -     20485 ATTAC
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           3839 5 -      8775 CTGAC
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            93286 0 +    112873 C
e Megaderma_lyra.MegLyr_scaffold_3562                       61469 13 -    234502 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16291 1 -    119109 I
e Hylobates_pileatus_a.tarseq_592                             29498 0 -     60944 C
e Hylobates_pileatus_b.LG03                                     92553610 0 - 189753342 C
e Perodicticus_potto.k141_713187                            21078 0 -     27972 C
e Perodicticus_ibeanus.k141_117958                           1781 0 -     23713 C
e Octodon_degus.JH651621.1                                3675089 8 +  10294119 I
e Myocastor_coypus.MyoCoy_scaffold_3653                     86536 6 -    117718 I
e Hystrix_cristata.HysCri_scaffold_50788                     2619 0 +     22540 C
e Heterocephalus_glaber.JH602058.1                        2547649 0 +  31725842 C
e Fukomys_damarensis.KN123630.1                          13889540 0 -  19261668 C
e Dolichotis_patagonum.DolPat_scaffold_14102                33375 0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             56104 16 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                14631 16 +     26546 I
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 26958 6 -     67205 I
e Cricetulus_griseus.LT883672.1                          53025429 0 +  72327488 C
e Chinchilla_lanigera.JH721867.1                         15957948 6 +  43084221 I
e Cavia_tschudii.CavTsc_scaffold_488                       173989 0 +    436027 C
e Cavia_porcellus.DS562889.1                             15795798 0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15783848 16 -  24422027 I
e Castor_canadensis.CasCan_scaffold_47037                   27024 0 +     33760 C
e Capromys_pilorides.CapPil_scaffold_647363                   796 6 +      1887 I
e Arctocebus_calabarensis.k141_1161114                      14526 30 +     17483 I

a score=0.000000
s hg38.chr4_GL000008v2_random                                8265 2 +    209709 T-----T
s Acinonyx_jubatus.LLWD01000356.1                         2030359 2 +   3721120 T-----T
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    108627 2 -    189883 T-----G
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10653693 2 +  23371972 T-----T
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7090195 2 -  16596857 T-----T
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                    8904 2 -     22067 A-----T
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_3103707                  59288 2 +     61638 T-----C
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        51096 2 +     53391 T-----C
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         1820 2 +     72529 T-----C
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          1396 2 +      3797 T-----C
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             6490 2 -     18050 T-----T
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  7607 2 -     11521 T-----T
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              7165 2 -     21359 T-----T
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1856473                                5548 2 +      7227 T-----T
i Alouatta_juara.k141_1856473                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          6463 2 -     10438 T-----T
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            3117 2 +      7047 T-----T
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             6401 2 +     10410 T-----T
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1374428                             204 2 -     25526 T-----T
i Alouatta_puruensis.k141_1374428                       C 0 C 0
s Alouatta_seniculus.k141_990213                             3122 2 +      6429 T-----T
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3516854 2 +   4113121 C-----T
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      387317 2 -    631301 T-----T
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            27762 2 +     33004 T-----T
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 58795 2 +     78111 T-----T
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            1726 2 +     22701 T-----T
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5745686 2 +   9889416 T-----T
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             2278 2 -    104377 T-----T
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               2278 2 +     23246 T-----T
i Aotus_vociferans.k141_718647                          C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 5416 2 -     29036 T-----T
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9535540 2 +  39197703 T-----T
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             56828 2 +     85812 T-----T
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 7825 2 +     89302 T-----T
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             12334 2 -     58268 T-----T
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             60322 2 +    119057 T-----T
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               2272 2 -     25888 T-----T
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 3127 2 -     16375 T-----T
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_767228                               9099 2 -      9688 T-----T
i Avahi_peyrierasi.k141_767228                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26377066 2 +  51448160 T-----T
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        2297 2 -     13118 T-----T
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   39954 2 -     72089 T-----T
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6556376 2 +   6870073 T-----T
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138136607 2 - 161108492 T-----T
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     568985 2 -    998990 T-----T
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136292340 2 - 158972876 T-----T
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1227961 2 -   1914593 T-----T
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Camelus_bactrianus.KN276303.1                           3216098 2 -   8989139 T-----T
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           394282 2 -  15254737 T-----T
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2970019 2 +   6889770 T-----T
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11515081 2 +  39901454 G-----T
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   10098 2 +     87036 G-----T
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11261740 2 -  35597290 G-----T
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11084269 2 +  39895921 G-----T
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16451303 2 -  44759192 G-----T
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21321961 2 + 157394656 C-----T
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135703188 2 - 157403528 C-----T
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_647363                   802 1 +      1887 ------T
i Capromys_pilorides.CapPil_scaffold_647363             I 6 C 0
s Carlito_syrichta.NW_007248099.1                          305570 2 +    345090 T-----T
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               56497 1 +     67245 ------T
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   155811 2 -    276539 T-----T
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18887008 2 -  29618158 T-----T
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 4554 2 -     26817 T-----T
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                 8794 2 +     25043 T-----T
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         4606 2 +     21754 T-----T
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4360280 2 +   7569818 t-----g
i Ceratotherium_simum.JH767818.1                        I 651 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_520758          282 2 -       446 t-----g
i Ceratotherium_simum_cottoni.CerCot_scaffold_520758    N 0 C 0
s Cercocebus_atys.KQ010443.1                              6551084 2 +   6739814 T-----T
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      52561 2 -     54931 T-----T
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         17545 2 -     19697 T-----T
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         55076 2 -    107033 T-----T
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        1519 2 -      3853 T-----C
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          25451 2 +     30494 T-----C
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           1474 2 -      4022 T-----C
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          1366 2 -      3505 T-----C
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           20172 2 +     35983 T-----C
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_mona.ctg12                               46473447 2 +  46592721 T-----C
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      31274 2 +     33420 T-----C
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        1310 2 -      3443 T-----C
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      2301 2 -      4669 T-----C
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        2102 2 -      4411 T-----C
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         1625 2 -      4205 T-----C
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           55463 2 -     68416 T-----T
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            4512 2 +     13308 T-----T
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             1807 2 -     18223 T-----T
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             18830 2 +     25473 T-----T
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           37869 2 +     57117 T-----T
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          42544 2 +     54541 T-----T
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15957954 1 +  43084221 ------T
i Chinchilla_lanigera.JH721867.1                        I 6 C 0
s Chlorocebus_aethiops.ctg22                             15134905 2 -  15256731 T-----C
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      29951 2 -     53260 T-----C
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101140399 2 + 101219884 T-----C
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                13499 2 -     21363 A-----T
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           758805 2 +    964067 A-----T
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_141308              5581 2 -     12508 N-----N
i Chrysochloris_asiatica.ChrAsi_scaffold_141308         C 0 C 0
s Colobus_angolensis.KN985967.1                          10878981 2 +  10971483 T-----T
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147660140 2 + 156195979 T-----T
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            12125 2 +     23629 T-----T
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60609759 2 +  78930452 T-----T
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         35896 2 -     40477 t-----t
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 I 305
s Cricetomys_gambianus.CriGam_scaffold_949                 274065 2 -    399297 T-----T
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             15707 2 -     19186 T-----C
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            48387 2 -     70449 T-----T
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  204786 2 -    956709 T-----T
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 26964 1 -     67205 ------T
i Ctenomys_sociabilis.CteSoc_scaffold_19489             I 6 C 0
s Dasypus_novemcinctus.JH568778.1                          178674 2 -   6883506 A-----T
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16841337 2 +  31942871 T-----T
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80033805 2 -  96802777 T-----T
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18695804 2 -  18957592 T-----T
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 318937 2 +    993696 T-----G
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_170113                  200 2 +       818 t-----g
i Diceros_bicornis.DicBicMic_scaffold_170113            N 0 C 0
s Echinops_telfairi.JH980316.1                           22990833 2 -  44670279 G-----T
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                  9186 2 +     24177 t-----t
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1488499 2 +   1727528 T-----T
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7803225 2 +  15467074 A-----T
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        235713 2 -    369425 T-----T
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           2723 2 -      7838 T-----T
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85867002 2 +  99434291 T-----T
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Equus_asinus.JREZ01000137.1                             2952197 2 -   4388051 T-----T
i Equus_asinus.JREZ01000137.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13346208 2 +  41866177 T-----T
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                           8200 2 +     92910 T-----T
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erythrocebus_patas.Contig8                             48767084 2 -  48907691 T-----C
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          311950 2 +    330699 T-----T
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             58379 2 +     89355 T-----T
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              1534 2 +     13586 A-----T
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               1471 2 -      6809 A-----T
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             7941 2 +     36558 A-----T
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             4258 2 +     60246 A-----T
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 7746 2 +    109717 A-----T
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               12120 2 +     16540 A-----T
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                12397 2 +     27497 A-----T
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           14853 2 +     26808 A-----T
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                29587 2 +     46535 A-----T
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              12310 2 -     29447 A-----T
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129889339 2 - 159252932 T-----T
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129276413 2 - 158578461 T-----T
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 17548 2 +     52776 T-----T
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13889540 1 -  19261668 ------T
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     207480 1 -    847004 ------T
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                            9860 1 -     43889 ------T
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           6908 1 +     27357 ------T
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               152795 2 +    324696 T-----T
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    178012 2 -    189561 T-----T
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                            9207 2 -     18683 A-----G
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               1658 2 -     14630 T-----T
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119648756 2 - 195582420 T-----T
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   73766 2 +    118900 A-----T
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                         2081 2 +      3980 A-----T
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             24561 2 +     26611 A-----T
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             2015 2 +     56096 A-----T
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        25288 2 -     42470 A-----T
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        41885 2 -     54384 A-----T
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              13590 2 +     53719 T-----T
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                24366 2 -     91191 C-----T
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2547649 1 +  31725842 ------T
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               53065 2 +     73687 C-----C
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              144075 2 +    277961 T-----T
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      275496 2 -    477199 T-----T
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              4651 2 -      9143 T-----T
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg649                                    98330 2 +    115816 T-----T
i Hoolock_leuconedys.ctg649                                C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 12658 2 -     67322 T-----T
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hylobates_abbotti.k141_493872                              1467 2 +      5897 T-----T
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_282275                                680 2 +      1846 T-----T
i Hylobates_agilis.k141_282275                          C 0 C 0
s Hylobates_klossii.k141_466549                              7925 2 +     11537 T-----T
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_muelleri.k141_1133650                             902 2 -      2775 T-----T
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     2619 2 +     22540 T-----T
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7122311 2 +  13083262 C-----T
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_3334527                                   8525 2 +      9207 T-----T
i Indri_indri.k141_3334527                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               5732 2 +     17520 T-----T
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8561866 2 +  11848649 A-----T
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               20564 2 +     37189 T-----T
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          46383 2 -    147782 T-----T
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   110679 2 -    115756 T-----T
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258403564 2 - 285822530 A-----T
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        20458 2 +     39228 T-----T
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            49834 2 +     63517 T-----T
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        75054 2 +    116806 T-----T
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     28095 2 -     33031 T-----T
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3082361 2 -   3498232 T-----T
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lipotes_vexillifer.KE558548.1                            132907 2 +   3060487 T-----T
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19244170 2 +  19376315 T-----T
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            7193 1 +     84689 ------T
i Loris_lydekkerianus.k141_550999                       C 0 I 1
s Loris_tardigradus.ctg97                                 3774951 1 +   6799190 ------T
i Loris_tardigradus.ctg97                               C 0 I 1
s Loxodonta_africana.GL010040.1                          20587641 2 -  62548349 A-----T
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11083725 2 +  39895028 G-----T
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             15856 2 +     74745 T-----T
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12702362 2 +  12821369 T-----T
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               4455 2 +      6569 T-----T
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           42755 2 +     63263 T-----T
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_1068107                               11332 2 +     12679 T-----T
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                 905 2 +      3017 T-----T
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  42517 2 -     79256 T-----T
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196031437 2 + 196197964 T-----T
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11441541 2 +  11645122 T-----T
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   1467 2 -     46448 T-----T
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                1294 2 -      3617 T-----T
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 11627 2 -     55006 T-----T
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43836666 2 +  43892939 T-----T
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                3889 2 -      5978 T-----T
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               1469 2 -     27140 T-----T
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43433330 2 -  43563597 T-----T
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4446156 2 -   4543643 T-----T
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            142973 2 +    252755 G-----T
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             33037 2 +     58827 G-----T
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36870158 2 +  64221397 C-----T
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_1828            224559 2 -    226874 T-----T
i Mellivora_capensis.MelCap_flattened_line_1828         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233                8084 2 +     15977 T-----T
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1043009 2 -  26018355 T-----T
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_183284                    603 2 +      2166 T-----T
i Mesoplodon_bidens.MesBid_scaffold_183284              C 0 C 0
s Microcebus_murinus.CM007691.1                          16506679 2 +  47401472 T-----T
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  27781 2 -     48017 G-----T
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               19653 2 -     32043 T-----T
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22815368 2 -  98408828 T-----T
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8206388 2 +  10048721 T-----T
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            31069 2 +     45743 T-----T
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        32004 2 +     34273 T-----C
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         7659 2 -    104932 T-----T
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     2093 2 +      8497 T-----T
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 143330 2 +    154973 T-----T
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                157973 2 +    265003 T-----T
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 1597 2 -      4346 T-----T
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  141280 2 -    168139 T-----T
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          16187 2 -    100666 T-----T
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70761555 2 +  92629107 t-----t
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75484849 2 +  98207768 t-----t
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67549170 2 +  89017189 t-----t
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74324268 2 +  97876770 T-----T
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              7072 2 +     98495 A-----T
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4419412 2 -  28371801 T-----T
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     86542 1 -    117718 ------T
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 6 C 0
s Myotis_brandtii.KE161952.1                               964518 2 +   8389877 T-----T
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5016195 2 +   6462685 T-----T
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3462104 2 -   3747815 T-----T
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         7301 2 +     66751 T-----T
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             2059 2 -      8794 G-----T
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            107427 2 +    362372 t-----t
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               4369 2 +     48152 T-----T
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4481260 2 -  14209539 T-----T
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3947939 2 -   4490290 T-----T
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  46302 2 +     94413 T-----T
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1223136                          10136 2 -     11253 T-----T
i Nomascus_annamensis.k141_1223136                      C 0 C 0
s Nomascus_concolor.k141_468488                               779 2 -      1482 T-----T
i Nomascus_concolor.k141_468488                         C 0 I 22
s Nomascus_gabriellae.k141_906566                             768 2 -      2544 T-----T
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             21242 2 -  18771707 T-----T
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_844529                                   517 2 +      2124 T-----T
i Nomascus_siki_a.k141_844529                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                26721 2 +   3668941 G-----T
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65563539 1 -  95554990 ------T
i Nycticebus_bengalensis.LG16                           C 0 I 1
s Nycticebus_coucang.k141_2051882                             384 1 +      6470 ------T
i Nycticebus_coucang.k141_2051882                       C 0 I 1
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65665906 1 +  89412551 ------T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 I 1
s Octodon_degus.JH651621.1                                3675097 1 +  10294119 ------T
i Octodon_degus.JH651621.1                              I 8 C 0
s Odobenus_rosmarus.KB229369.1                             675919 2 -   3126709 T-----T
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1076722 2 +   1425656 T-----T
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         33884 2 +     78940 T-----T
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  121191 2 +    145789 T-----T
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  33127 2 +     62360 T-----T
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7221623 2 -   7562323 T-----T
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              39854 2 -     66828 G-----T
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      304056 2 -    505867 G-----T
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       35548 1 +     38679 ------T
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18004986 1 -  38779656 ------T
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134074168 2 - 275406953 C-----T
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      75382 2 +    140051 C-----T
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127571000 2 - 205426864 T-----T
i Pan_paniscus.CM003386.1                               I 5 C 0
s Pan_troglodytes.CM009241.2                            120148147 2 - 196562556 T-----T
i Pan_troglodytes.CM009241.2                            I 5 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  30502 2 +    295523 T-----T
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3634106 2 +  18214204 T-----T
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5023883 2 -   6340057 T-----T
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1062883 2 -   1292953 C-----T
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188152115 2 - 188283584 T-----T
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            48327 2 +     76494 T-----T
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47509511 2 +  47705337 T-----T
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 63494 2 -    104429 T-----T
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  13278 2 -     29451 T-----T
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                33683 2 +     35859 T-----T
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    111834 2 -    135482 T-----T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4946296 2 -   8017169 T-----T
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            118240 2 -    122454 T-----T
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           1370 2 -      3310 T-----T
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       21276 2 -     82327 T-----T
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           18027 2 +     19957 T-----T
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26736036 2 +  26888534 T-----T
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            93286 1 +    112873 ------T
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           2307 2 +     21690 T-----T
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       19063 2 +     44506 T-----T
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        19281 2 +     67491 T-----T
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                       9526 2 -     98129 T-----T
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     19126 2 +    147771 T-----T
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        19377 2 -     23762 T-----T
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_2078842                         19325 2 -     19696 T-----T
i Plecturocebus_dubius.k141_2078842                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         19199 2 +    152463 T-----T
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      5956 2 +      8943 T-----T
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                          8916 2 +    134592 T-----T
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          19509 2 -     75465 T-----T
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              183553 2 -    373494 T-----T
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19803457 2 +  19899266 T-----T
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               1606 2 -     15069 T-----T
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              1740 2 +     14865 T-----T
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                72929 2 +     78963 C-----C
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6844937 2 +  12164890 A-----T
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     13372 2 -     30946 T-----T
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_diadema.k141_577245                           39407 2 +     52369 T-----T
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         31796 2 -     44753 T-----T
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            13718 2 +     27322 T-----T
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       13362 2 -     53241 T-----T
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         35633 2 -     48185 T-----T
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           29145 2 +     77221 T-----T
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                             864 2 -     27784 T-----T
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        241270 2 -    344369 T-----T
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13242979 2 -  17261082 T-----T
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             600933 2 -   3946241 T-----T
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131530699 2 - 161321710 T-----T
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             25731 2 +     56732 T-----T
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6802221 2 +   6970761 T-----T
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             1613 2 +     18040 T-----T
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                12808 2 +     68503 T-----T
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13911097 2 +  90463843 T-----T
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1784579 2 +   2252614 T-----T
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           12168 2 -     14454 T-----T
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206373494 2 - 206558726 T-----T
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44851142 2 -  45163003 T-----T
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                16282 2 +    109198 T-----T
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       4455 2 +     12214 T-----T
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15668934 2 -  43202129 T-----T
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                         809 2 +     34089 T-----T
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                               740 2 -     60842 T-----T
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                               809 2 +     67014 T-----T
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                               809 2 +     60816 T-----T
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                  737 2 -     76454 T-----T
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17337317 2 -  30362882 C-----T
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         16918 2 -     62485 T-----T
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   28354 2 -    114521 T-----T
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1527475                       24156 2 +     26421 T-----T
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       4618 2 +     20762 T-----T
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         38351 2 +     40653 T-----T
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                            8910 2 -     12194 T-----T
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     22329 2 -     27512 T-----T
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         31350 2 -     33692 T-----T
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   94379 2 -    120886 T-----T
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            14576 2 +    739146 T-----T
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2236237 2 +   2842873 C-----T
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             230982 2 -    276980 T-----T
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            23947 2 +     62062 T-----T
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189268873 2 + 218635234 T-----T
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                     13898280 2 +  13920577 T-----T
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               2791 2 -      6213 T-----T
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               11737 2 +     45698 G-----T
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      803731 2 +   1148477 T-----T
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  54393 2 +     99546 T-----T
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               23061 2 +     42269 T-----T
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               56369 2 +     65473 T-----T
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194003650 2 - 194193292 T-----T
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                   603 2 +      6782 A-----T
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  132870 2 -    259118 T-----T
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        22728 2 +     38948 T-----T
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   16455 2 -     32910 T-----T
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       22353 2 +     24652 T-----T
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      1238 2 -      3559 T-----T
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           39177 2 -     54611 T-----T
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       15176 2 +     17312 T-----T
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    22546 2 -     25040 T-----T
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          1212 2 +      3528 T-----T
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  47574 2 +     51589 T-----T
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       10742 2 +     14732 T-----T
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       1220 2 -     28054 T-----T
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44656015 2 -  44834318 T-----T
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        1025 2 +      3372 T-----T
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   2219 2 +     90398 T-----T
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16078317 2 +  31416278 G-----T
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2787605 2 -   3938065 C-----T
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                     447 2 +     13056 C-----T
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69310341 2 -  96451834 T-----T
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 23540 2 -     25548 T-----T
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6510968 2 +  28682327 T-----T
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  1880 2 -     20643 A-----T
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             21425 2 -     33872 A-----T
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1521655 7 -   2331223 TGTAAGT
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                134121 2 -    281493 G-----T
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       123436 2 -    134049 C-----T
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        210647 2 -    227762 T-----T
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     12276 2 -     20485 A-----T
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           3844 2 -      8775 T-----T
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Megaderma_lyra.MegLyr_scaffold_3562                       61469 13 -    234502 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16291 1 -    119109 I
e Hylobates_pileatus_a.tarseq_592                             29498 0 -     60944 C
e Hylobates_pileatus_b.LG03                                     92553610 0 - 189753342 C
e Pithecia_vanzolinii.k141_831006                            9698 0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13470790 0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          1796 0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                         8487 0 -     16101 C
e Pithecia_hirsuta.k141_1152968                              5289 0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        21338 0 +     78826 C
e Pithecia_albicans.k141_991845                             39909 0 -     61926 C
e Perodicticus_potto.k141_713187                            21078 0 -     27972 C
e Perodicticus_ibeanus.k141_117958                           1781 0 -     23713 C
e Dolichotis_patagonum.DolPat_scaffold_14102                33375 0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             56104 16 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                14631 16 +     26546 I
e Cricetulus_griseus.LT883672.1                          53025429 0 +  72327488 C
e Chiropotes_sagulatus.k141_773804                          11591 0 +     40510 C
e Chiropotes_israelita.k141_1189915                         67417 0 +    196370 C
e Cercopithecus_albogularis.ctg51                              11986701 0 +  12117833 C
e Cavia_tschudii.CavTsc_scaffold_488                       173989 0 +    436027 C
e Cavia_porcellus.DS562889.1                             15795798 0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15783848 16 -  24422027 I
e Castor_canadensis.CasCan_scaffold_47037                   27024 0 +     33760 C
e Cacajao_melanocephalus.k141_1160263                        3809 0 -    134917 C
e Cacajao_hosomi.k141_303789                                11270 0 -    216513 C
e Cacajao_calvus.k141_96166                                  9222 0 +    125063 C
e Cacajao_ayresi.k141_724503                               110196 0 -    171031 C
e Arctocebus_calabarensis.k141_1161114                      14526 30 +     17483 I

a score=0.000000
s hg38.chr4_GL000008v2_random                                8267 22 +    209709 GT-CTGGA-G----AGCA-GAGAGCA--AGT
s Acinonyx_jubatus.LLWD01000356.1                         2030361 22 +   3721120 GC-CTGGA-T----TGCA-AAGTACC--TGT
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    108629 22 -    189883 GT-CAAGG-G----ATTA-CAAACCA--GGT
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10653695 22 +  23371972 GC-CTGGG-T----TGTG-GAGTTCC--TGT
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7090197 22 -  16596857 GC-CTGAA-T----TTCA-GAGTCTC--TAT
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                    8906  5 -     22067 GC-CTA-------------------------
i Allactaga_bullata.AllBul_scaffold_70162               C 0 I 2
s Allenopithecus_nigroviridis.k141_3103707                  59290 22 +     61638 GT-CTGGA-G----AGCA-GAGTGCC--AGT
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        51098 22 +     53391 GT-CTGGA-G----AGCA-GAGTACC--AGT
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         1822 22 +     72529 GT-CTGGA-G----AGCA-GAGTACC--AGT
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          1398 22 +      3797 GT-CTGGA-G----AGCA-GAGTACC--AGT
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             6492 22 -     18050 GT-CTGGA-G----AGCA-GACTGCC--AGT
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  7609 22 -     11521 GT-CTGGA-G----AGCA-GACTGCC--AGT
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              7167 22 -     21359 GT-CTGGA-G----AGCA-GACTGCC--AGT
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1856473                                5550 22 +      7227 GT-CTGGA-G----AGCA-GACTGCC--AGT
i Alouatta_juara.k141_1856473                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          6465 22 -     10438 GT-CTGGA-G----AGCA-GACTGCC--AGT
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            3119 22 +      7047 GT-CTGGA-G----AGCA-GACTGCC--AGT
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             6403 22 +     10410 GT-CTGGA-G----AGCA-GACTGCC--AGT
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1374428                             206 22 -     25526 GT-CTGGA-G----AGCA-GATTGCC--AGT
i Alouatta_puruensis.k141_1374428                       C 0 I 9
s Alouatta_seniculus.k141_990213                             3124 22 +      6429 GT-CTGGA-G----AGCA-GACTGCC--AGT
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3516856 22 +   4113121 GC-CTAGA-A----AGTG-AAGTGCT--TCT
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      387319 21 -    631301 GC-CTGAA-T----T-CA-GAGTGCC--TGT
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            27764 22 +     33004 GC-CTAGA-A----AGTG-AAGTGTT--TCT
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 58797 22 +     78111 GT-CTGGA-G----AGCA-GACTGAC--AGG
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            1728 22 +     22701 CT-CTGGA-G----AGCA-GACTGAC--AGG
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5745688 22 +   9889416 GT-CTGGA-G----AGCA-GACTGAC--AGG
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             2280 22 -    104377 GT-CTGGA-G----AGCA-GACTGAC--AGG
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               2280 22 +     23246 GT-CTGGA-G----AGCA-GACTGAC--AGG
i Aotus_vociferans.k141_718647                          C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 5418 21 -     29036 GC-CTGAA-T----T-CA-GAGTGCC--TGT
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9535542 22 +  39197703 GT-CTGGA-G----AGCA-GACTGCC--ATT
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             56830 22 +     85812 GT-CTGGA-G----AGCA-GACTGCC--ATT
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 7827 22 +     89302 GT-CTGGA-G----AGCA-GACTGCC--ATT
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             12336 22 -     58268 GT-CTGGA-G----AGCA-GACTGCC--ATT
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             60324 22 +    119057 GT-CTGGA-G----AGCA-GACTGCC--ATT
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               2274 22 -     25888 GT-CTGGA-G----AGCA-GACTGCC--ATT
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 3129 22 -     16375 GT-CTGGA-C----AGCA-GAGTACC--AGT
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_767228                               9101 22 -      9688 GT-CTGGA-C----AGCA-GAGTACC--AGT
i Avahi_peyrierasi.k141_767228                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26377068 22 +  51448160 GC-CTAGA-A----AGTG-AAGTGCC--TGT
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        2299 22 -     13118 GC-CTAGA-A----AGTG-AAGTTCC--TGT
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   39956 22 -     72089 GC-CTAGA-A----AGTG-AAGTGCT--TCT
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6556378 22 +   6870073 GC-CTAGA-A----AGTG-CCGTGCT--TCT
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138136609 22 - 161108492 GC-CTAGA-A----AGTG-ANGTGCT--TCT
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     568987 22 -    998990 GC-CTAGA-A----AGTG-ACGTGCT--TCT
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136292342 22 - 158972876 GC-CTAGA-A----AGTG-ACGTGCT--TCT
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1227963 22 -   1914593 GC-CTAGA-A----AGTG-ACGTGCT--TCT
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Camelus_bactrianus.KN276303.1                           3216100 22 -   8989139 GC-CTAGA-G----AGCA-AAATGCC--TGT
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           394284 22 -  15254737 GC-CTAGA-G----AGCA-AAATGCC--TGT
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2970021 22 +   6889770 GC-CTAGA-G----AGCA-AAATGCC--TGT
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11515083 23 +  39901454 GC-CTGGA-C----TGCAAGAGTACC--TGT
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   10100 23 +     87036 GC-CTGGA-C----TGCAAGAGTACC--TGT
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11261742 23 -  35597290 GC-CTGGA-C----TGCAAGAGTACC--TGT
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11084271 23 +  39895921 GC-CTGGA-C----TGCAAGAGTACC--TGT
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16451305 23 -  44759192 GC-CTGGA-C----TGCAAGAGTACC--TGT
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21321963 22 + 157394656 GC-CTAGA-A----AGTG-AAGTGCT--TCT
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135703190 22 - 157403528 GC-CTAGA-A----AGTG-AAGTGCT--TCT
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_647363                   803 22 +      1887 CC-CTAGA-G----AGCA-ATATAGT--AAT
i Capromys_pilorides.CapPil_scaffold_647363             C 0 I 5
s Carlito_syrichta.NW_007248099.1                          305572 22 +    345090 AT-CTGGA-G----AACA-AAGtgcc--agt
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               56498 21 +     67245 AC-CTGAA-T----T-CA-GAGTGCC--TGT
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   27024 12 +     33760 ----------------CA-GAGCATG--AAA
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   155813 23 -    276539 GC-CTAGAGA----AGCA-AAGTGCC--TGT
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18887010 22 -  29618158 GT-CTTGA-G----AGCA-GACTGCC--AGT
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 4556 22 -     26817 GT-CTTGA-G----AGCA-GACTGCC--AGT
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                 8796 22 +     25043 GT-CTTGA-G----AGCA-GACTGCC--AGT
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         4608 22 +     21754 AT-CTGGA-G----AACA-AAGTGCC--AGT
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4360282 22 +   7569818 gc-CTGGA-T----TGCA-GAGCGCC--TGT
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_520758          284 22 -       446 gc-ctGGA-T----TGCA-GAGCGCC--TGT
i Ceratotherium_simum_cottoni.CerCot_scaffold_520758    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6551086 22 +   6739814 GT-CTGGA-G----AGCA-GAGTGCC--AGT
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      52563 22 -     54931 GT-CTGGA-G----AGCA-GAGTGCC--AGT
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         17547 22 -     19697 GT-CTGGA-G----AGCA-GAGTGCC--AGT
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         55078 22 -    107033 GT-CTGGA-G----AGCA-GAGTGCC--AGT
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        1521 22 -      3853 GT-CTGGA-G----AGCA-GAGTGCC--AGT
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          25453 22 +     30494 GT-CTGGA-G----AGCA-GAGTGCC--AGT
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           1476 22 -      4022 GT-CTGGA-G----AGCA-GAGTGCC--AGT
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          1368 22 -      3505 GT-CTGGA-G----AGCA-GAGTGCC--AGT
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           20174 22 +     35983 GT-CTGGA-G----AGCA-GAGTGCC--AGT
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11986701 17 +  12117833 ------ga-g----agta-gagTGCC--AGT
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46473449 22 +  46592721 GT-CTGGA-G----AGCA-GAGTGCC--AGT
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      31276 22 +     33420 GT-CTGGA-G----AGCA-GAGTGCC--AGT
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        1312 22 -      3443 GT-CTGGA-G----AGCA-GAGTGCC--AGT
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      2303 22 -      4669 GT-CTGGA-G----GGCA-GAGTGCC--AGT
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        2104 22 -      4411 GT-CTGGA-G----AGCA-GAGTGCC--AGT
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         1627 22 -      4205 GT-CTGGA-G----AGCA-GAGTGCC--AGT
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           55465 22 -     68416 GT-CTGGA-C----AGCA-GAGTACC--AGT
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            4514 22 +     13308 GT-CTGGA-C----AGCA-GAGTACC--AGT
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             1809 22 -     18223 GT-CCAGA-G----AGCA-GACTGCC--AGT
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             18832 22 +     25473 GT-CCAGA-G----AGCA-GACTGCC--AGT
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           37871 22 +     57117 GT-CCAGA-G----AGCA-GACTGCC--AGT
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          42546 22 +     54541 GT-CCAGA-G----AGCA-GACTGCC--AGT
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15957955 22 +  43084221 CC-CTAGG-G----AGCA-GAGTAAT--AAT
i Chinchilla_lanigera.JH721867.1                        C 0 I 5
s Chlorocebus_aethiops.ctg22                             15134907 22 -  15256731 GT-CTGGA-G----AGCA-CAGTACC--AGT
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      29953 22 -     53260 GT-CTGGA-G----AGCA-GAGTACC--AGT
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101140401 22 + 101219884 GT-CTGGA-G----AGCA-AAGTACC--AGT
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                13501 22 -     21363 GC-CTGGA-G----AAAA-GAGTGCC--TGA
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           758807 22 +    964067 GC-CTGGA-G----AAAA-CAGTGCC--TGA
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_141308              5583 22 -     12508 NN-NNNNN-N----NNNN-NNNNNNN--NNN
i Chrysochloris_asiatica.ChrAsi_scaffold_141308         C 0 C 0
s Colobus_angolensis.KN985967.1                          10878983 22 +  10971483 GT-CTGGA-G----AGCA-GAGTGCC--TGT
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147660142 22 + 156195979 GT-CTGGA-G----AGCA-GAGTGCC--TGT
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            12127 22 +     23629 GT-CTGGA-G----AGCA-GAGTGCC--CAT
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60609761 22 +  78930452 GCCTGGAG-A----ATA--CAGtgtc--tgt
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         36203 21 -     40477 AC-CTGGA-T----TGCA-G-GTGCC--TGT
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     I 305 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 274067 22 -    399297 GT-CAAAT-G----AGCA-GAATCCT--GGT
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             15709 19 -     19186 TA-TTGGA-A----ATAA-AACTGTA-----
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            48389 21 -     70449 AC-CTAGA-T----TGCA-AAGTACC--T-T
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  204788 22 -    956709 CC-CTAGA-T----AAGA-ACACACT--AGT
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 26965 22 -     67205 CC-CTAGA-G----AGCA-ACACAGT--AAT
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          178676 22 -   6883506 GC-CTGGA-C----AATA-GAGTGCC--AGT
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16841339 22 +  31942871 GT-CTGAA-G----AGCA-GAGTGCC--AGT
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80033807 22 -  96802777 GC-CTGGA-A----AGTG-AAGTGCC--TGT
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18695806 21 -  18957592 GC-CTCAA-T----T-CA-GAGTGCC--GAT
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 318939 22 +    993696 GC-CTGGA-T----TGCA-GAGTGCC--TGT
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_170113                  202 22 +       818 gc-ctGGA-T----TGCA-GAGCGCC--TGT
i Diceros_bicornis.DicBicMic_scaffold_170113            C 0 C 0
s Echinops_telfairi.JH980316.1                           22990835 26 -  44670279 AT-CTCtt-tatggttgt-ttttttt--taa
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                  9188 21 +     24177 gc-TTGGA-T----TGAA-G-GTGac--tga
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1488501 22 +   1727528 GC-CTAGA-A----AGTG-AAGTGCT--TCT
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7803227 22 +  15467074 GT-CTGAG-G----AACC-aagtgtt--tat
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        235715 22 -    369425 GT-CAAGT-G----AATG-ATTTCCT--GGA
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           2725 22 -      7838 GT-CAAGT-G----AATG-ATTTCCT--GGT
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85867004 22 +  99434291 GG-CTGGA-T----TGCA-CAGTCCC--TGT
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Equus_asinus.JREZ01000137.1                             2952199 22 -   4388051 GC-CTGGA-T----TGCA-GAGCGCC--CAT
i Equus_asinus.JREZ01000137.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13346210 22 +  41866177 GC-CTGGA-T----TGCA-GAGCGCC--CAT
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                           8202 22 +     92910 GC-CTGGA-T----TGCA-GAGCGCC--CAT
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erythrocebus_patas.Contig8                             48767086 22 -  48907691 GT-CTGGA-G----AGCA-GAGTACC--AGT
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          311952 22 +    330699 GC-CTAGA-A----AGTG-AAGTGCC--TGT
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             58381 22 +     89355 GC-CTAGA-A----AGTG-AAGTGCC--TGT
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              1536 21 +     13586 GC-CTGGA-C----AG-A-GAGTGTC--AGT
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               1473 21 -      6809 GT-CTGGA-C----AG-A-GAGTGTC--AGT
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             7943 22 +     36558 GC-CTGGA-C----AGCA-GAGTGTC--AGT
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             4260 22 +     60246 GT-CTGGA-C----AGCA-GAGTGTC--AGT
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 7748 22 +    109717 GT-CTGGA-C----AGCA-GAGTGTC--AGT
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               12122 22 +     16540 GT-CTGGA-C----AGCA-GAGTGTC--AGT
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                12399 22 +     27497 GC-CTGGA-C----AGCA-GAGTGTC--AGT
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           14855 22 +     26808 GC-CTGGA-C----AGCA-GAGTGTC--AGT
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                29589 21 +     46535 GC-CTGGA-C----AG-A-GAGTGTC--AGT
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              12312 21 -     29447 GC-CTGGA-C----AG-A-GAGTGTC--AGT
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129889341 22 - 159252932 GC-CTGGA-T----TGCA-AAGTACC--TGT
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129276415 22 - 158578461 GC-CTGGA-T----TGCA-AAGTACC--TGT
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 17550 22 +     52776 GC-CTGGA-T----TGCA-AAGTACC--TGT
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13889541 22 -  19261668 CC-CTAGA-G----AGCA-GAGTCCT--Aat
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     207481 22 -    847004 AT-CTGGA-T----GGTA-GAGCATC--AGT
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                            9861 22 -     43889 AT-CTGGA-T----GGTA-GAGCATC--AGT
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           6909 22 +     27357 AT-CTGGA-C----AGTA-GTGCATC--AGA
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               152797 22 +    324696 GC-CTGGA-G----GACA-GAGTGCT--AGG
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    178014 22 -    189561 GC-CTAGA-A----AGTG-AAGCGCT--TCC
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                            9209 22 -     18683 GC-CTATA-G----AGCA-GAGTGCC--AGT
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               1660 22 -     14630 GT-CTGGA-G----AGCA-GAGTGCC--GGT
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119648758 22 - 195582420 GT-CTGGA-G----AGCA-GAGTGCC--GGT
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   73768 22 +    118900 GC-CTAGA-T----AGCA-GAGTGTC--CGT
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                         2083 22 +      3980 GT-CTGGA-C----AGCA-GAGTGCC--AGT
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             24563 22 +     26611 GT-CTGGA-C----AGCA-GAGTGCC--AGT
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             2017 22 +     56096 GT-CTGGA-C----AGCA-GAGTGCC--AGT
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        25290 22 -     42470 GT-CTGGA-C----AGCA-GAGTGCC--AGT
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        41887 22 -     54384 GT-CTGGA-C----AGCA-GAGTGCC--AGT
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              13592 22 +     53719 AC-CTAGA-T----TGCA-AACTACC--TGT
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                24368 22 -     91191 GC-CTAGA-A----AGTG-AAGTGCT--TCT
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2547650 22 +  31725842 CC-CTAGA-G----AGCA-GAGTACT--AAT
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               53067 21 +     73687 AC-CTGGA-G-----AAT-GAGAACT--TAT
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              144077 22 +    277961 GC-CTAGA-A----AGTG-ACGTGCC--TGT
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      275498 21 -    477199 GC-CTGGA-T----TGCA-G-GCACC--TGT
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              4653 20 -      9143 GT-CTGGA-T----TGCA-G-GCAC---TGT
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg649                                    98332 22 +    115816 GT-CTGGA-G----AGCA-GAGTGCC--GGT
i Hoolock_leuconedys.ctg649                                C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 12660 22 -     67322 GC-ATAGA-T----TGCA-AAGTACT--TCT
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hylobates_abbotti.k141_493872                              1469 22 +      5897 GT-CTGGA-G----AGCA-GAGTGCC--AGT
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_282275                                682 22 +      1846 GT-CTGGA-G----AGCA-GAGTGCC--AGT
i Hylobates_agilis.k141_282275                          C 0 C 0
s Hylobates_klossii.k141_466549                              7927 22 +     11537 GT-CTGGA-G----AGCA-GAGTGCC--AGT
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_muelleri.k141_1133650                             904 22 -      2775 GT-CTGGA-G----AGCA-GAGTGCC--AGT
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     2621 22 +     22540 CT-TTAGA-G----ACCA-AAGGACT--AAT
i Hystrix_cristata.HysCri_scaffold_50788                C 0 I 5
s Ictidomys_tridecemlineatus.JH393315.1                   7122313 22 +  13083262 GC-TTGGA-G----AACA-CAGTGTC--AGT
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_3334527                                   8527 22 +      9207 GT-CTGGA-C----AGCA-GAGTACC--AGT
i Indri_indri.k141_3334527                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               5734 22 +     17520 GC-CTAGA-A----AGTG-AAGTGCC--TGT
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8561868  5 +  11848649 GC-CTA-------------------------
i Jaculus_jaculus.JH725517.1                            C 0 I 2
s Kogia_breviceps.KogBre_flattened_line_35920               20566 22 +     37189 GC-CTAGA-A----AGTG-AAGTGCC--TGT
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          46385 22 -    147782 GT-CTGGA-G----AGTA-GACTGCC--ATT
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   110681 22 -    115756 GC-CTGAA-T----TGCA-GAGTGCT--TGT
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258403566 22 - 285822530 GT-CTGGA-C----AGCA-GAGTGCC--AGT
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        20460 22 +     39228 GT-ACGGA-C----AGCA-GAACACC--AGT
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            49836 22 +     63517 GT-CTGGA-C----AGCA-GAATACC--AGT
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        75056 22 +    116806 GT-CCGGA-C----AGCA-GAATACC--AGT
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     28097 22 -     33031 GT-CCGGA-C----AGCA-GAATACC--AGT
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3082363 22 -   3498232 GC-CTGGA-T----TGCA-GAGCCCC--TGT
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lipotes_vexillifer.KE558548.1                            132909 22 +   3060487 GC-CCAGA-A----AGTG-AAGTGAC--TGT
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19244172 22 +  19376315 GT-CTGGA-G----AGCA-GAGTGCC--AGT
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            7195 22 +     84689 GT-CTGGA-T----AGTA-GAGCATC--AGT
i Loris_lydekkerianus.k141_550999                       I 1 C 0
s Loris_tardigradus.ctg97                                 3774953 22 +   6799190 GT-CTGGA-T----AGTA-GAGCATC--AGT
i Loris_tardigradus.ctg97                               I 1 C 0
s Loxodonta_africana.GL010040.1                          20587643 21 -  62548349 AC-CTGGA-G-----TGT-GAGTGCC--TAT
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11083727 23 +  39895028 GC-CTGGA-C----TGCAAGAGTACC--TGT
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             15858 22 +     74745 GT-CTGGA-G----AGCA-GAGTGCC--AGT
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12702364 22 +  12821369 GT-CTGGA-G----AGCA-GAGTGCC--AGT
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               4457 22 +      6569 GT-CTGGA-G----AGCA-GAGTGCC--AGT
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           42757 22 +     63263 GT-CTGGA-G----AGCA-GAGTGCC--AGT
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_1068107                               11334 22 +     12679 GT-CTGGA-G----AGCA-GAGTGCC--AGT
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                 907 22 +      3017 GT-CTGGA-G----AGCA-GAGTGCC--AGT
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  42519 22 -     79256 GT-CTGGA-G----AGCA-GAGTGCC--AGT
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196031439 22 + 196197964 GT-CTGGA-G----AGCA-GAGTGCC--AGT
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11441543 22 +  11645122 GT-CTGGA-G----AGCA-GAGTGCC--AGT
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   1469 22 -     46448 GT-CTGGA-G----AGCA-GAGTGCC--AGT
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                1296 22 -      3617 GT-CTGGA-G----AGCA-GAGTGCC--AGT
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 11629 22 -     55006 GT-CTGGA-G----AGCA-GAGTGCC--AGT
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43836668 22 +  43892939 GT-CTGGA-G----AGCA-GAGTGCC--AGT
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                3891 22 -      5978 GT-CTGGA-G----AGCA-GAGTGCC--AGT
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               1471 22 -     27140 GT-CTGGA-G----AGCA-GAGTGCC--AGT
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43433332 22 -  43563597 GT-CTGGA-G----AGCA-GAGTGCC--AGT
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4446158 22 -   4543643 GT-CTGGA-G----AGCA-GAGTGCC--AGT
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            142975 22 +    252755 GC-CTAGA-T----TGCA-GATTGCC--TGT
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             33039 22 +     58827 GC-CTAGA-T----TGCA-GATTGCC--TGT
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36870160 22 +  64221397 GC-TTGGA-G----AACA-CAGTGTC--AGT
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       61482 21 -    234502 GC-CTGGA-T----TGCA-G-GGTCC--CAC
i Megaderma_lyra.MegLyr_scaffold_3562                   I 13 C 0
s Mellivora_capensis.MelCap_flattened_line_1828            224561 22 -    226874 GC-CTGGA-T----TGCA-GAGTCCC--TGT
i Mellivora_capensis.MelCap_flattened_line_1828         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233                8086 22 +     15977 GT-CAAGG-G----AATA-CATTCCA--AGG
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1043011 11 -  26018355 GT-CAAGT-G----gat--------------
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_183284                    605 22 +      2166 AC-CTAGA-A----AGTA-AAGTGCC--TGT
i Mesoplodon_bidens.MesBid_scaffold_183284              C 0 C 0
s Microcebus_murinus.CM007691.1                          16506681 22 +  47401472 GT-CTGGA-C----AGCA-GAGTACC--AGT
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  27783 24 -     48017 AT-CTATC-T----TTGC-TTTTTTTNNAAA
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               19655 21 -     32043 GC-CTGAA-T----C-CA-GAGTGCC--TGT
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22815370 22 -  98408828 GT-CAAGT-G----AATG-ATTTCCT--GGT
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8206390 21 +  10048721 GC-CTGAA-C----TGCA-GGGGG-C--TGT
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            31071 21 +     45743 GC-CTGAA-C----TGCA-GGGGG-C--TGT
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        32006 22 +     34273 GT-CTGGA-G----AGCA-GAGTGCC--AGT
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         7661 22 -    104932 GC-CTGGA-T----TGCA-GAGCCCC--TGT
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     2095 22 +      8497 GT-CTGGA-C----AGCA-GAGTACC--AGT
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 143332 22 +    154973 GC-CTGGA-A----AGTG-AAGTGCC--TGT
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                157975 21 +    265003 GC-CTGAA-T----T-CA-GAGTGCC--TGT
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 1599 22 -      4346 GC-CTAGA-A----AGTG-AAGTGCT--TCT
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  141282 22 -    168139 AC-CTAGA-T----TGCA-AAGTATC--TGT
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          16189 22 -    100666 GT-CTGAA-T----TGCA-GAGTGTT--TGT
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70761557 20 +  92629107 gt-taaat-g----aata-taATCT----GG
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75484851 20 +  98207768 gt-caAAT-G----AATA-TAATCT----GG
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67549172 20 +  89017189 gt-taAAC-T----AACA-TAATCT----GA
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74324270 20 +  97876770 GT-CAAAT-G----AATA-TAATCT----GG
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              7074 17 +     98495 AC-CTAGA-T----A------GTACT--AGT
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4419414 22 -  28371801 GC-CTGGA-T----TGCA-GAGTCCC--TGT
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     86543 20 -    117718 CC---ACA-G----AGCC-ACATAAT--AAT
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 I 5
s Myotis_brandtii.KE161952.1                               964520 18 +   8389877 GC-CTGAA-T----TGCA-GAGT------GT
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5016197 18 +   6462685 GC-CTGAA-T----TGCA-GAGT------GT
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3462106 18 -   3747815 GC-CTGAA-T----TGCA-GAGT------GT
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         7303 18 +     66751 GC-CTGAA-T----TGCA-GAGT------GT
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             2061 22 -      8794 GC-CTGGA-G----AACA-GAGTACT--TGT
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            107429  2 +    362372 tt-----------------------------
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               4371 22 +     48152 GT-CTGGA-G----AGCA-GAGTGCC--CGT
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4481262 22 -  14209539 GC-CTGGA-T----TGCA-GAGCCCC--TGT
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3947941 22 -   4490290 GC-CTAGA-A----AGTG-AAGTGCC--TGT
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  46304 21 +     94413 GC-CTGAA-T----T-CA-GAGTGAC--TGT
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1223136                          10138 22 -     11253 GT-CTGGA-G----AGCA-GAGTGCC--GGT
i Nomascus_annamensis.k141_1223136                      C 0 C 0
s Nomascus_concolor.k141_190193                               394 22 -      1094 GT-CTGGA-G----AGCA-GAGTGCC--GGT
i Nomascus_concolor.k141_190193                         n 22 I 9
s Nomascus_gabriellae.k141_906566                             770 22 -      2544 GT-CTGGA-G----AGCA-GAGTGCC--GGT
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             21244 22 -  18771707 GT-CTGGA-G----AGCA-GAGTGCC--GGT
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_844529                                   519 22 +      2124 GT-CTGGA-G----AGCA-GAGTGCC--GGT
i Nomascus_siki_a.k141_844529                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                26723 23 +   3668941 GC-CTGGA-C----TGCAAGAGTACC--TGT
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65563541 22 -  95554990 GT-CTGGA-T----AGTA-GAGCATC--AGT
i Nycticebus_bengalensis.LG16                           I 1 C 0
s Nycticebus_coucang.k141_2051882                             386 22 +      6470 GT-CTGGA-T----AGTA-GAGCATC--AGT
i Nycticebus_coucang.k141_2051882                       I 1 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65665908 22 +  89412551 GT-CTGGA-T----AGTA-GAGCATC--AGT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     I 1 C 0
s Octodon_degus.JH651621.1                                3675098 22 +  10294119 CA-GTAGA-G----AGCA-ACacagt--aat
i Octodon_degus.JH651621.1                              C 0 I 5
s Odobenus_rosmarus.KB229369.1                             675921 21 -   3126709 GC-CTGGA-T----TGCA-GAGTC-C--TGT
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1076724 22 +   1425656 GC-CTAGA-A----AGTG-AAGCGCT--TCT
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         33886 22 +     78940 GC-CTAGA-A----AGTG-AAGTGCT--TCT
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  121193 22 +    145789 GT-CAAGT-G----AATG-ATTTCCT--AGT
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  33129 22 +     62360 GC-CAAGT-G----AATG-GAATCCT--GGT
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7221625 22 -   7562323 GC-CTAGA-A----AGTG-AAGTGCC--TGT
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              39856 22 -     66828 GT-CTGGA-T----TACT-GAGTACC--TGT
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      304058 23 -    505867 GC-CTGGA-C----TGCAAGAGTACC--TGT
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       35549 22 +     38679 AT-CTGGA-C----GGTA-GAGCATC--AGT
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18004987 22 -  38779656 AT-CTGGA-C----GGTA-GAGcatc--agt
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134074170 22 - 275406953 GC-CTAGA-A----AGTG-AAGTGCT--TCT
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      75384 22 +    140051 GC-CTAGA-A----AGTG-AAGTGCT--TCT
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127571002 22 - 205426864 GT-CTGGA-G----AGCA-GAGTGCC--AGT
i Pan_paniscus.CM003386.1                               C 0 I 37
s Pan_troglodytes.CM009241.2                            120148149 22 - 196562556 GT-CTGGA-G----AGCA-GAGTGCC--AGT
i Pan_troglodytes.CM009241.2                            C 0 I 37
s Panthera_onca.PanOnc_flattened_line_1615                  30504 22 +    295523 GC-CTGGA-T----TGCA-AAGTACC--TGT
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3634108 22 +  18214204 GC-CTGGA-T----TGCA-AAGTACC--TGT
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5023885 22 -   6340057 GC-CTGGA-T----TGCA-AAGTACC--TGT
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1062885 22 -   1292953 GC-CTAGA-A----AGTG-AAGTGCT--TCT
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188152117 22 - 188283584 GT-CTGGA-G----AGCA-GAGTGCC--AGT
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            48329 22 +     76494 GT-CTGGA-G----AGCA-GAGTGCC--AGT
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47509513 22 +  47705337 GT-CTGGA-G----AGCA-GAGTGCC--AGT
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 63496 22 -    104429 GT-CTGGA-G----AGCA-GAGTGCC--AGT
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  13280 22 -     29451 GT-CTGGA-G----AGCA-GAGTGCC--AGT
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                33685 22 +     35859 GT-CTGGA-G----AGCA-GAGTGCC--AGT
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    111836 22 -    135482 GC-CTAGA-T----CGCA-AAGTACC--TGT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           1781 21 -     23713 -T-CTGGA-C----TGTA-GAGCATC--AGT
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            21078 21 -     27972 -T-CTGGA-C----TGTA-GAGCATC--AGT
i Perodicticus_potto.k141_713187                        C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4946298 22 -   8017169 GC-CAAGT-G----AATG-GAAtcct--ggt
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            118242 22 -    122454 GC-CTAGA-A----AGTG-AAGTGCC--TGT
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           1372 22 -      3310 GT-CTGGA-G----AGCA-GAGTGCC--GGT
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       21278 22 -     82327 GT-CTGGA-G----AGCA-GAGTGCC--GGT
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           18029 22 +     19957 GT-CTGGA-G----AGCA-GAGTGCC--GGT
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26736038 22 +  26888534 GT-CTGGA-G----AGCA-GAGTGCC--GGT
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            93287 22 +    112873 AC-CTGAA-T----TGCA-GAGTGCT--TGT
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           2309 22 +     21690 GC-CTAGA-A----AGTG-AAGTGCC--TGT
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       19065 22 +     44506 GT-CCGGA-G----AGCA-GACTGCC--AGT
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        19283 22 +     67491 GT-CCGGA-G----AGCA-GACTGCC--AGT
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                       9528 22 -     98129 GT-CCGGA-G----AGCA-GACTGCC--AGT
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     19128 22 +    147771 GT-CCGGA-G----AGCA-GACTGCC--AGT
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        19379 22 -     23762 GT-CCGGA-G----AGCA-GACTGCC--AGT
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_2078842                         19327 22 -     19696 GT-CCGGA-G----AGCA-GACTGCC--AGT
i Plecturocebus_dubius.k141_2078842                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         19201 22 +    152463 GT-CCGGA-G----AGCA-GACTGCC--AGT
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      5958 22 +      8943 GT-CCGGA-G----AGCA-GACTGCC--AGT
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                          8918 22 +    134592 GT-CCGGA-G----AGCA-GACTGCC--AGT
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          19511 22 -     75465 GT-CCGGA-G----AGCA-GACTGCC--AGC
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              183555 22 -    373494 GT-CTGGA-G----AGCA-GAGTGCC--AGT
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19803459 22 +  19899266 GT-CTGGA-G----AGCA-GAGTGCC--AGT
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               1608 22 -     15069 GT-CTGGA-G----AGCA-AAGTGCC--CGT
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              1742 22 +     14865 GT-CTGGA-G----AGCA-GAGTGCC--CAT
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                72931 21 +     78963 GC-CTGGA-G-----AGT-GAGAGCT--TAT
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6844939 22 +  12164890 GT-CTGGA-C----AGCA-GAGTGCC--AGT
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     13374 22 -     30946 GT-CTGGA-C----AGCA-GAGTACC--AGT
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_diadema.k141_577245                           39409 22 +     52369 GT-CTGGA-C----TGCA-GAGTACC--AGT
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         31798 22 -     44753 GT-CTGGA-C----TGCA-GAGTACC--AGT
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            13720 22 +     27322 GT-CTGGA-C----TGCA-GAGTACC--AGT
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       13364 22 -     53241 GT-CTGGA-C----AGCA-GAGTACC--AAT
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         35635 22 -     48185 GT-CTGGA-C----AGCA-GAGTACC--AGT
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           29147 22 +     77221 GT-CAAGG-G----AATA-CAATcta--agg
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                             866 21 -     27784 GC-CTGAA-T----T-CA-AAGGGCC--TGT
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        241272 22 -    344369 GG-CTGGA-T----TGCA-GAGTCCC--TGT
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13242981 21 -  17261082 GC-TTGGA-T----TGAA-G-GTGCC--TGA
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             600935 21 -   3946241 GC-TTGGA-T----TGAA-G-GTGCC--TGA
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131530701 22 - 161321710 GC-CTGGA-T----TGCA-AAGTACC--TGT
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             25733 22 +     56732 GT-CTGGA-G----AGCA-GAGTGCC--CGT
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6802223 22 +   6970761 GT-CTGGA-G----AGCA-GAGTGCC--CGT
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             1615 22 +     18040 GT-CTGGA-G----AGCA-GAGTGCC--CGT
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                12810 22 +     68503 GC-CTAGA-A----AGTG-AAGTGCT--TCT
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13911099 20 +  90463843 GT-CAAAT-G----AATA-TAATAC----GG
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1784581 21 +   2252614 GC-CTGGA-T----TGCA-G-GTGCC--CAT
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           12170 22 -     14454 GT-CTGGA-G----AGCA-GAGTGCC--CGT
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206373496 22 - 206558726 GT-CTGGA-G----AGCA-GAGTGCC--CGT
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44851144 22 -  45163003 GT-CTGGA-G----AGCA-GAGTGCC--CGT
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                16284 21 +    109198 GC-TTGGA-T----TGAA-G-GTGCC--TGA
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       4457 21 +     12214 G--CTAGA-A----AGTG-AAGTGCT--TCT
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15668936 22 -  43202129 CT-CTGGA-G----AGCA-GACTGCC--AGT
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                         811 22 +     34089 CT-CTGGA-G----AGCA-GACTGCC--AGT
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                               742 22 -     60842 CT-CTGGA-G----AGCA-GACTGCC--AGT
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                               811 22 +     67014 CT-CTGGA-G----AGCA-GACTGCC--AGT
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                               811 22 +     60816 CT-CTGGA-G----AGCA-GACTGCC--TGT
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                  739 22 -     76454 CT-CTGGA-G----AGCA-GACTGCC--AGT
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17337319 22 -  30362882 GT-CTTGA-G----AGCA-GACTGCC--AGT
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         16920 22 -     62485 GT-CTTGA-G----AGCA-GACTGCC--AGT
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   28356 22 -    114521 GCCTGGAT-A----GCA--AAGTGCC--TGT
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1527475                       24158 22 +     26421 GT-CTGGA-G----AGCA-GAGTGCC--CGT
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       4620 22 +     20762 GT-CTGGA-G----AGCA-GAGTGCC--CGT
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         38353 22 +     40653 GT-CTGGA-G----AGCA-GAGTGCC--CGT
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                            8912 22 -     12194 GT-CTGGA-G----AGCA-GAGTGCC--CGT
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     22331 22 -     27512 GT-CTGGA-G----AGCA-GAGTGCC--CGT
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         31352 22 -     33692 GT-CTGGA-G----AGCA-GAGTGCC--CGT
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   94381 22 -    120886 GT-CAAGT-G----AATG-GAATCCT--GTT
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            14578 22 +    739146 GC-TGAAA-A----GCAA-GAGTGTC--TGT
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2236239 22 +   2842873 GC-TTGGA-G----AACA-CAGTGTC--AGT
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             230984 22 -    276980 AG-CTAGA-T----TGCA-GAATCTC--TGT
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            23949 22 +     62062 AC-CTAGA-T----TTCA-AAGTACC--TGT
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189268875 23 + 218635234 GC-CTAGAGA----AGTA-AGGTGcc--tgt
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                     13898282 22 +  13920577 GT-CTGGA-G----AGCA-GAGTGCC--GGT
i Symphalangus_syndactylus.tarseq_24                    C 0 I 9
s Tadarida_brasiliensis.TadBra_scaffold_145589               2793 22 -      6213 GT-CTGAA-T----TGCA-GAATGCC--TGT
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               11739 22 +     45698 GC-CTGGA-G----AACA-GAGTACT--TGT
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      803733 22 +   1148477 GC-CTGGA-T----TACA-GAGTGTC--TGT
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  54395 22 +     99546 GC-CTGGA-T----TACA-GAGTGTC--TGT
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               23063 22 +     42269 AT-CTGGA-G----AACA-AAGTGCC--AGT
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               56371 22 +     65473 AT-CTGGA-G----AACA-AAGTGCC--AGT
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194003652 22 - 194193292 GT-CTGGA-G----ACCA-GAGTGCC--AGA
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                   605 22 +      6782 GC-CTGTA-G----AATA-GAGCACC--AGT
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  132872 21 -    259118 GC-CTGAA-T----T-CA-GAGTGTC--TGT
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        22730 22 +     38948 GT-CTGGA-G----AGCA-GAGTGTC--CGT
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   16457 22 -     32910 GT-CTGGA-G----AGCA-GAGTGCC--CGT
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       22355 22 +     24652 GT-CTGGA-G----AGCA-GAGTGTC--CGT
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      1240 22 -      3559 GT-CTGGA-G----AGCA-GAGTGCC--CGT
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           39179 22 -     54611 GT-CTGGA-G----AGCA-GAGTGCC--CGT
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       15178 22 +     17312 GT-CTGGA-G----AGCA-GAGTGTC--CGT
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    22548 22 -     25040 GT-CTGGA-G----AGCA-GAGTGCC--CGT
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          1214 22 +      3528 GT-CTGGA-G----AGCA-GAGTGCC--CGT
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  47576 22 +     51589 GT-CTGGA-G----AGCA-GAGTGCC--CGT
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       10744 22 +     14732 GT-CTGGA-G----AGCA-GAGTGCC--CGT
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       1222 22 -     28054 GT-CTGGA-G----AGCA-GAGTGCC--CGT
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44656017 22 -  44834318 GT-CTGGA-G----AGCA-GAGTGCC--CGT
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        1027 22 +      3372 GT-CTGGA-G----AGCA-GAGTGCC--CGT
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   2221 22 +     90398 GC-CTAGA-A----AGTG-AGGTGCC--TGT
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16078319 21 +  31416278 GC-CTGGA-G-----AGC-AAGTGCC--TAT
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2787607 22 -   3938065 GT-GTGGA-G----AGCA-AAGTCCC--AGT
i Tupaia_chinensis.KB320831.1                           C 0 I 282
s Tupaia_tana.TupTan_flattened_line_68454                     449 22 +     13056 GT-GTGGA-G----AGCA-GAGTCCC--AGC
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69310343 22 -  96451834 GC-CTAGA-A----AGTG-AAGTGCC--TGT
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 23542 22 -     25548 GCCTGGAG-A----GCA--GAATGCC--TGT
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6510970 22 +  28682327 AC-CTGGA-T----TGTG-GAGCTCC--TGT
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  1882 22 -     20643 GT-CTGGA-C----AGCA-GAGTGCC--AGT
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             21427 22 -     33872 GT-CTGGA-C----AGCA-GAGTGCC--AGT
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1521662 22 -   2331223 GC-CTAGA-G----AGCA-AAGTGCC--TGT
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                134123 23 -    281493 GC-CTGGA-T----TGCAAGAGTACC--TGT
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       123438 22 -    134049 AC-CTAGA-A----AACA-GAGTGTC--AAT
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        210649 21 -    227762 GC-CTGGA-C----TGCA-GAGTC-C--TGT
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     12278  5 -     20485 GC-CTA-------------------------
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 I 2
s Ziphius_cavirostris.ZipCav_flattened_line_127025           3846 22 -      8775 AC-CTAGA-A----AGTA-AAGTGCC--TGT
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16291  1 -    119109 I
e Hylobates_pileatus_a.tarseq_592                             29498  0 -     60944 C
e Hylobates_pileatus_b.LG03                                     92553610  0 - 189753342 C
e Pithecia_vanzolinii.k141_831006                            9698  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13470790  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          1796  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                         8487  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                              5289  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        21338  0 +     78826 C
e Pithecia_albicans.k141_991845                             39909  0 -     61926 C
e Dolichotis_patagonum.DolPat_scaffold_14102                33375  0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             56104 16 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                14631 16 +     26546 I
e Cricetulus_griseus.LT883672.1                          53025429  0 +  72327488 C
e Chiropotes_sagulatus.k141_773804                          11591  0 +     40510 C
e Chiropotes_israelita.k141_1189915                         67417  0 +    196370 C
e Cavia_tschudii.CavTsc_scaffold_488                       173989  0 +    436027 C
e Cavia_porcellus.DS562889.1                             15795798  0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15783848 16 -  24422027 I
e Cacajao_melanocephalus.k141_1160263                        3809  0 -    134917 C
e Cacajao_hosomi.k141_303789                                11270  0 -    216513 C
e Cacajao_calvus.k141_96166                                  9222  0 +    125063 C
e Cacajao_ayresi.k141_724503                               110196  0 -    171031 C
e Arctocebus_calabarensis.k141_1161114                      14526 30 +     17483 I

a score=0.000000
s hg38.chr4_GL000008v2_random                                8289  9 +    209709 GC---------ATA-------------A--------------------T-T-------------T
s Acinonyx_jubatus.LLWD01000356.1                         2030383  8 +   3721120 GC---------AT--------------T--------------------T-G-------------T
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    108651  9 -    189883 AC---------ATT-------------T--------------------T-T-------------T
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10653717  8 +  23371972 GC---------AT--------------T--------------------T-A-------------T
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7090219  8 -  16596857 GC---------AT--------------T--------------------T-G-------------T
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allenopithecus_nigroviridis.k141_3103707                  59312  9 +     61638 GC---------ATA-------------A--------------------T-T-------------T
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        51120  9 +     53391 GC---------ATA-------------G--------------------T-T-------------T
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         1844  9 +     72529 GC---------ATA-------------G--------------------T-T-------------T
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          1420  9 +      3797 GC---------ATA-------------G--------------------T-T-------------T
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             6514  9 -     18050 GC---------ATA-------------A--------------------T-T-------------T
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  7631  9 -     11521 GC---------ATA-------------A--------------------T-T-------------T
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              7189  9 -     21359 GC---------ATA-------------A--------------------T-T-------------T
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1856473                                5572  9 +      7227 GC---------ATA-------------A--------------------T-T-------------T
i Alouatta_juara.k141_1856473                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          6487  9 -     10438 GC---------ATA-------------A--------------------T-T-------------T
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            3141  9 +      7047 GC---------ATA-------------A--------------------T-T-------------T
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             6425  9 +     10410 GC---------ATA-------------A--------------------T-T-------------T
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                             228  9 -      4927 GC---------ATA-------------A--------------------T-T-------------T
i Alouatta_puruensis.k141_1284840                       n 9 I 69
s Alouatta_seniculus.k141_990213                             3146  9 +      6429 GC---------ATA-------------A--------------------T-T-------------T
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3516878  8 +   4113121 GC---------GT--------------G--------------------T-T-------------T
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      387340  8 -    631301 GC---------AT--------------T--------------------T-T-------------T
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            27786  8 +     33004 GC---------AT--------------G--------------------T-T-------------T
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 58819  9 +     78111 GC---------ATA-------------A--------------------T-T-------------T
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            1750  9 +     22701 GC---------ATA-------------A--------------------T-T-------------T
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5745710  9 +   9889416 GC---------ATA-------------A--------------------T-T-------------T
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             2302  9 -    104377 GC---------ATA-------------A--------------------T-T-------------T
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               2302  9 +     23246 GC---------ATA-------------A--------------------T-T-------------T
i Aotus_vociferans.k141_718647                          C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 5439  8 -     29036 GC---------AT--------------T--------------------T-T-------------T
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9535564  9 +  39197703 GC---------ATA-------------A--------------------T-T-------------T
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             56852  9 +     85812 GC---------ATA-------------A--------------------T-T-------------T
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 7849  9 +     89302 GC---------ATA-------------A--------------------T-T-------------T
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             12358  9 -     58268 GC---------ATA-------------A--------------------T-T-------------T
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             60346  9 +    119057 GC---------ATA-------------A--------------------T-T-------------T
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               2296  9 -     25888 GC---------ATA-------------A--------------------T-T-------------T
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 3151  9 -     16375 GC---------ATT-------------T--------------------T-C-------------C
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_767228                               9123  9 -      9688 GC---------ATT-------------T--------------------T-C-------------C
i Avahi_peyrierasi.k141_767228                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26377090  8 +  51448160 GC---------AT--------------G--------------------T-T-------------T
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        2321  8 -     13118 GC---------AT--------------G--------------------T-T-------------T
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   39978  8 -     72089 GC---------AT--------------G--------------------T-T-------------T
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6556400  8 +   6870073 GC---------AT--------------G--------------------T-T-------------T
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138136631  8 - 161108492 GC---------AT--------------G--------------------T-T-------------T
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     569009  8 -    998990 GC---------AT--------------G--------------------T-T-------------T
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136292364  8 - 158972876 GC---------AT--------------G--------------------T-T-------------T
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1227985  8 -   1914593 GC---------AT--------------G--------------------T-T-------------T
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               110196  6 -    171031 ------------TA-------------A--------------------T-T-------------T
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                  9222  6 +    125063 ------------TA-------------A--------------------T-T-------------T
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                11270  6 -    216513 ------------TA-------------A--------------------T-T-------------T
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        3809  6 -    134917 ------------TA-------------A--------------------T-T-------------T
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3216122  8 -   8989139 GC---------AT--------------T--------------------T-T-------------T
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           394306  8 -  15254737 GC---------AT--------------T--------------------T-T-------------T
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2970043  8 +   6889770 GC---------AT--------------T--------------------T-T-------------T
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11515106  8 +  39901454 GC---------AT--------------T--------------------T-G-------------T
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   10123  8 +     87036 GC---------AT--------------T--------------------T-G-------------T
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11261765  8 -  35597290 GC---------AT--------------T--------------------T-G-------------T
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11084294  8 +  39895921 GC---------AT--------------T--------------------T-G-------------T
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16451328  8 -  44759192 GC---------AT--------------T--------------------T-G-------------T
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21321985  8 + 157394656 GC---------AT--------------G--------------------T-T-------------C
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135703212  8 - 157403528 GC---------AT--------------G--------------------T-T-------------C
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_647363                   830  3 +      1887 ------------------------------------------------T-T-------------T
i Capromys_pilorides.CapPil_scaffold_647363             I 5 C 0
s Carlito_syrichta.NW_007248099.1                          305594 17 +    345090 gt---------ttt-----tgtttttgt--------------------t-t-------------t
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               56519  8 +     67245 GC---------AT--------------T--------------------T-T-------------T
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   27036  9 +     33760 AC---------ATT-------------T--------------------T-G-------------G
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   155836  8 -    276539 GC---------AT--------------T--------------------G-T-------------T
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18887032  9 -  29618158 GC---------ATA-------------A--------------------T-T-------------T
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 4578  9 -     26817 GC---------ATA-------------A--------------------T-T-------------T
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                 8818  9 +     25043 GC---------ATA-------------A--------------------T-T-------------T
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         4630 30 +     21754 TA---------TTTTTTGTTT-----GT--------------------T-TGTTTGTTTTTCTTT
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4360304  8 +   7569818 GC---------AT--------------T--------------------T-T-------------T
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_520758          306  8 -       446 GC---------AT--------------T--------------------T-T-------------T
i Ceratotherium_simum_cottoni.CerCot_scaffold_520758    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6551108  9 +   6739814 GC---------ATC-------------A--------------------T-T-------------C
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      52585  9 -     54931 GC---------ATC-------------A--------------------T-T-------------C
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         17569  9 -     19697 GC---------ATC-------------A--------------------T-T-------------C
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         55100  9 -    107033 GC---------ATC-------------A--------------------T-T-------------C
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        1543  9 -      3853 GC---------ATA-------------A--------------------T-T-------------T
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          25475  9 +     30494 GC---------ATA-------------A--------------------T-T-------------T
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           1498  9 -      4022 GC---------ATA-------------A--------------------T-T-------------T
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          1390  9 -      3505 GC---------ATA-------------A--------------------T-T-------------T
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           20196  9 +     35983 GC---------ATA-------------A--------------------T-T-------------T
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11986718  9 +  12117833 GC---------ATA-------------A--------------------T-T-------------T
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46473471  9 +  46592721 GC---------AAA-------------A--------------------T-T-------------T
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      31298  9 +     33420 GC---------ATA-------------A--------------------T-T-------------T
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        1334  9 -      3443 GC---------ATA-------------A--------------------T-T-------------T
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      2325  9 -      4669 GC---------ATA-------------A--------------------T-T-------------T
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        2126  9 -      4411 GC---------AAA-------------A--------------------T-T-------------T
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         1649  9 -      4205 GC---------ATA-------------A--------------------T-T-------------T
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           55487  9 -     68416 GC---------ATT-------------T--------------------T-C-------------T
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            4536  9 +     13308 GC---------ATT-------------T--------------------T-C-------------T
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             1831  9 -     18223 GC---------ATA-------------A--------------------T-T-------------T
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             18854  9 +     25473 GC---------ATA-------------A--------------------T-T-------------T
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           37893  9 +     57117 GC---------ATA-------------A--------------------T-T-------------T
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          42568  9 +     54541 GC---------ATA-------------A--------------------T-T-------------T
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15957982  4 +  43084221 ------------------------------------------------TTT-------------T
i Chinchilla_lanigera.JH721867.1                        I 5 I 14
s Chiropotes_israelita.k141_1189915                         67417  6 +    196370 ------------TT-------------A--------------------T-T-------------T
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          11591  6 +     40510 ------------TT-------------A--------------------T-T-------------T
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15134929  9 -  15256731 GC---------ATA-------------A--------------------T-T-------------T
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      29975  9 -     53260 GC---------ATA-------------A--------------------T-T-------------T
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101140423  9 + 101219884 GC---------ATA-------------G--------------------T-T-------------T
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                13523  8 -     21363 AC---------TA--------------T--------------------T-T-------------T
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           758829  8 +    964067 AC---------TA--------------T--------------------T-T-------------T
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_141308              5605 17 -     12508 NNNNNNNNNNNNN--------------N--------------------N-N-------------N
i Chrysochloris_asiatica.ChrAsi_scaffold_141308         C 0 C 0
s Colobus_angolensis.KN985967.1                          10879005  9 +  10971483 GC---------ATA-------------A--------------------T-T-------------T
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147660164  9 + 156195979 GC---------ATA-------------A--------------------T-T-------------T
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            12149  9 +     23629 GC---------ATA-------------A--------------------T-T-------------T
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60609783  9 +  78930452 gc---------at-------------tt--------------------t-t-------------c
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         36224  8 -     40477 GC---------AT--------------T--------------------T-T-------------T
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 274089  9 -    399297 AC---------ATT-------------T--------------------T-G-------------T
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             15728  4 -     19186 ---------------------------C--------------------T-T-------------T
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            48410  8 -     70449 GC---------AT--------------T--------------------T-G-------------T
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  204810  9 -    956709 GC---------ATC-------------T--------------------T-T-------------T
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 26987  5 -     67205 AC---------ATT---------------------------------------------------
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 I 16
s Dasypus_novemcinctus.JH568778.1                          178698  8 -   6883506 AA---------AA--------------T--------------------T-T-------------T
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16841361  9 +  31942871 GC---------ATT-------------T--------------------T-T-------------T
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80033829  8 -  96802777 GC---------AT--------------G--------------------T-T-------------T
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18695827  8 -  18957592 GC---------AT--------------T--------------------T-T-------------T
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 318961  8 +    993696 GC---------AT--------------T--------------------T-T-------------T
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_170113                  224  8 +       818 GC---------AT--------------T--------------------T-T-------------T
i Diceros_bicornis.DicBicMic_scaffold_170113            C 0 C 0
s Echinops_telfairi.JH980316.1                           22990861 15 -  44670279 tagggacaaacac--------------a--------------------g----------------
i Echinops_telfairi.JH980316.1                          C 0 I 241
s Eidolon_helvum.KE772537.1                                  9209  8 +     24177 ac---------at--------------t--------------------t-t-------------t
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1488523  8 +   1727528 GC---------AT--------------G--------------------T-T-------------T
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7803249  7 +  15467074 a----------tt--------------t--------------------t-t-------------t
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        235737  6 -    369425 A----------TAT-------------T--------------------T----------------
i Ellobius_lutescens.LOEQ01003611.1                     C 0 I 1
s Ellobius_talpinus.LOJH01090055.1                           2747  6 -      7838 A----------CAT-------------T--------------------T----------------
i Ellobius_talpinus.LOJH01090055.1                      C 0 I 1
s Enhydra_lutris.KZ291749.1                              85867026  8 +  99434291 GC---------AT--------------T--------------------T-G-------------T
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Equus_asinus.JREZ01000137.1                             2952221  8 -   4388051 GC---------AT--------------T--------------------T-T-------------T
i Equus_asinus.JREZ01000137.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13346232  8 +  41866177 GC---------AT--------------T--------------------T-T-------------T
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                           8224  8 +     92910 GC---------AT--------------T--------------------T-T-------------T
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erythrocebus_patas.Contig8                             48767108  9 -  48907691 GC---------ATA-------------G--------------------T-T-------------T
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          311974  8 +    330699 GC---------AT--------------G--------------------T-T-------------T
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             58403  8 +     89355 GC---------AT--------------G--------------------T-T-------------T
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              1557  9 +     13586 AC---------ATT-------------T--------------------T-C-------------T
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               1494  9 -      6809 AC---------ATT-------------T--------------------T-C-------------T
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             7965  9 +     36558 AC---------ATT-------------T--------------------T-C-------------T
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             4282  9 +     60246 AC---------ATT-------------T--------------------T-C-------------T
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 7770  9 +    109717 AC---------ATT-------------T--------------------T-C-------------T
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               12144  9 +     16540 AC---------ATT-------------T--------------------T-C-------------T
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                12421  9 +     27497 AC---------ATT-------------T--------------------T-C-------------T
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           14877  9 +     26808 AC---------ATT-------------T--------------------T-C-------------T
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                29610  9 +     46535 AC---------ATT-------------T--------------------T-C-------------T
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              12333  9 -     29447 AC---------ATT-------------T--------------------T-C-------------T
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129889363  8 - 159252932 GC---------AT--------------T--------------------T-G-------------T
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129276437  8 - 158578461 GC---------AT--------------T--------------------T-G-------------T
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 17572  8 +     52776 GC---------AT--------------T--------------------T-G-------------T
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13889563  5 -  19261668 gc---------att---------------------------------------------------
i Fukomys_damarensis.KN123630.1                         C 0 I 21
s Galago_moholi.ctg555                                     207503 12 -    847004 GC---------ATTTTT----------T--------------------T-T-------------T
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                            9883 12 -     43889 GC---------ATTTTT----------T--------------------T-T-------------T
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           6931 13 +     27357 GC---------ATTTTTT---------T--------------------T-T-------------T
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               152819  9 +    324696 AT---------ACT-------------T--------------------T-T-------------T
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    178036  8 -    189561 GC---------AC--------------A--------------------T-T-------------T
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                            9231  9 -     18683 GC---------ATT-------------T--------------------T-T-------------T
i Glis_glis.GliGli_scaffold_79770                       C 0 I 16
s Gorilla_beringei.k141_111300                               1682  9 -     14630 GC---------ATA-------------A--------------------T-T-------------T
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119648780  9 - 195582420 GC---------ATA-------------A--------------------T-T-------------T
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   73790  9 +    118900 GC---------ATT-------------T--------------------T-T-------------T
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 I 8
s Hapalemur_alaotrensis.k141_1198205                         2105  9 +      3980 AT---------GTT-------------T--------------------T-C-------------T
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             24585  9 +     26611 AT---------GTT-------------T--------------------T-C-------------T
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             2039  9 +     56096 AT---------GTT-------------T--------------------T-C-------------T
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        25312  9 -     42470 AT---------GTT-------------T--------------------T-C-------------T
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        41909  9 -     54384 AT---------GTT-------------T--------------------T-C-------------T
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              13614  8 +     53719 GC---------AT--------------T--------------------T-T-------------T
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                24390  8 -     91191 GC---------GT--------------G--------------------T-T-------------T
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2547672  5 +  31725842 gc---------att---------------------------------------------------
i Heterocephalus_glaber.JH602058.1                      C 0 I 2
s Heterohyrax_brucei.HetBruBak_scaffold_25354               53088 10 +     73687 AT---------TT--------------T------------------ATT-T-------------T
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              144099  8 +    277961 GC---------AT--------------G--------------------T-T-------------T
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      275519  8 -    477199 GC---------AC--------------T--------------------T-T-------------T
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              4673  8 -      9143 GC---------AC--------------T--------------------T-C-------------T
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg649                                    98354  9 +    115816 GC---------ATA-------------A--------------------T-T-------------T
i Hoolock_leuconedys.ctg649                                C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 12682  8 -     67322 GC---------AT--------------T--------------------T-A-------------T
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hylobates_abbotti.k141_493872                              1491  9 +      5897 GC---------ATA-------------A--------------------T-T-------------T
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_282275                                704  9 +      1846 GC---------ATA-------------A--------------------T-T-------------T
i Hylobates_agilis.k141_282275                          C 0 C 0
s Hylobates_klossii.k141_466549                              7949  9 +     11537 GC---------ATA-------------A--------------------T-T-------------T
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_muelleri.k141_1133650                             926  9 -      2775 GC---------ATA-------------A--------------------T-T-------------T
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             29498  3 -     60944 ------------------------------------------------T-T-------------T
i Hylobates_pileatus_a.tarseq_592                         C 0 I 36
s Hystrix_cristata.HysCri_scaffold_50788                     2648  3 +     22540 ------------------------------------------------T-T-------------T
i Hystrix_cristata.HysCri_scaffold_50788                I 5 I 14
s Ictidomys_tridecemlineatus.JH393315.1                   7122335  6 +  13083262 AC---------AAT-------------T-------------------------------------
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 I 2
s Indri_indri.k141_3334527                                   8549  9 +      9207 GC---------ATT-------------T--------------------T-C-------------C
i Indri_indri.k141_3334527                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               5756  8 +     17520 GC---------AT--------------G--------------------T-T-------------T
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               20588  8 +     37189 GC---------AT--------------G--------------------T-T-------------T
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          46407  9 -    147782 GC---------ATA-------------A--------------------T-T-------------T
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   110703  8 -    115756 GC---------TT--------------T--------------------T-T-------------T
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258403588  9 - 285822530 AT---------GTT-------------T--------------------T-C-------------T
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        20482  9 +     39228 GC---------ATT-------------T--------------------T-C-------------T
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            49858  9 +     63517 GC---------ATT-------------T--------------------T-C-------------T
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        75078  9 +    116806 GC---------ATT-------------T--------------------T-C-------------T
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     28119  9 -     33031 GC---------ATT-------------T--------------------T-C-------------T
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3082385  8 -   3498232 GC---------AT--------------T--------------------T-G-------------G
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lipotes_vexillifer.KE558548.1                            132931  8 +   3060487 GC---------AT--------------G--------------------T-T-------------T
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19244194  9 +  19376315 GC---------ATC-------------A--------------------T-T-------------C
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            7217 20 +     84689 GC---------ATTTTTTTTTTTTT--T--------------------T-T-------------T
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3774975 20 +   6799190 GC---------ATTTTATTTTTTTT--T--------------------T-T-------------T
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20587664  8 -  62548349 GC---------TT--------------T--------------------T-T-------------T
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11083750  8 +  39895028 GC---------AT--------------T--------------------T-G-------------T
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             15880  9 +     74745 GC---------ATC-------------A--------------------T-T-------------C
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12702386  9 +  12821369 GC---------ATC-------------A--------------------T-T-------------C
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               4479  9 +      6569 GC---------ATC-------------A--------------------T-T-------------C
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           42779  9 +     63263 GC---------ATC-------------A--------------------T-T-------------C
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_1068107                               11356  9 +     12679 GC---------ATC-------------A--------------------T-T-------------C
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                 929  9 +      3017 GC---------ATC-------------A--------------------T-T-------------C
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  42541  9 -     79256 GC---------ATC-------------A--------------------T-T-------------C
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196031461  9 + 196197964 GC---------ATC-------------A--------------------T-T-------------C
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11441565  9 +  11645122 GC---------ATC-------------A--------------------T-T-------------C
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   1491  9 -     46448 GC---------ATC-------------A--------------------T-T-------------C
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                1318  9 -      3617 GC---------ATC-------------A--------------------T-T-------------C
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 11651  9 -     55006 GC---------ATC-------------A--------------------T-T-------------C
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43836690  9 +  43892939 GC---------ATC-------------A--------------------T-T-------------C
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                3913  9 -      5978 GC---------ATC-------------A--------------------T-T-------------C
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               1493  9 -     27140 GC---------ATC-------------A--------------------T-T-------------C
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43433354  9 -  43563597 GC---------ATC-------------G--------------------T-T-------------C
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4446180  9 -   4543643 GC---------ATC-------------A--------------------T-T-------------C
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            142997  8 +    252755 GC---------AT--------------T--------------------T-T-------------T
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             33061  8 +     58827 GC---------AT--------------T--------------------T-T-------------T
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36870182  6 +  64221397 AC---------AAT-------------T-------------------------------------
i Marmota_marmota.CZRN01000005.1                        C 0 I 2
s Megaderma_lyra.MegLyr_scaffold_3562                       61503  5 -    234502 GC---------AA--------------T-------------------------------------
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_1828            224583  8 -    226874 GC---------AT--------------T--------------------T-G-------------T
i Mellivora_capensis.MelCap_flattened_line_1828         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233                8108 10 +     15977 AC---------ATT-------------T--------------------TTT-------------T
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 I 2
s Mesoplodon_bidens.MesBid_scaffold_183284                    627  8 +      2166 GC---------AT--------------G--------------------T-T-------------T
i Mesoplodon_bidens.MesBid_scaffold_183284              C 0 C 0
s Microcebus_murinus.CM007691.1                          16506703  9 +  47401472 GC---------ATT-------------T--------------------T-C-------------T
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  27807 15 -     48017 TAGGGACAAAGAA--------------A--------------------G----------------
i Microgale_talazaci.MicTal_scaffold_34660              C 0 I 237
s Micronycteris_hirsuta.MicHir_scaffold_37978               19676  8 -     32043 GC---------AT--------------T--------------------T-T-------------T
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22815392  6 -  98408828 A----------CTT-------------T--------------------T----------------
i Microtus_ochrogaster.CM001673.1                       C 0 I 1
s Miniopterus_natalensis.LDJU01000022.1                   8206411  8 +  10048721 GC---------AT--------------T--------------------T-T-------------T
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            31092  8 +     45743 GC---------AT--------------T--------------------T-T-------------T
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        32028  9 +     34273 GC---------ATA-------------A--------------------T-T-------------T
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         7683  8 -    104932 GC---------AT--------------T--------------------T-G-------------G
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     2117  9 +      8497 GC---------ATT-------------T--------------------T-C-------------T
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 143354  8 +    154973 GC---------AT--------------G--------------------T-T-------------T
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                157996  8 +    265003 GC---------AT--------------T--------------------T-T-------------T
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 1621  8 -      4346 GC---------AT--------------G--------------------T-T-------------T
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  141304  8 -    168139 GC---------AT--------------T--------------------T-T-------------T
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          16211  8 -    100666 GC---------TT--------------T--------------------T-T-------------T
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70761577  9 +  92629107 AT---------AGC-------------T--------------------A-T-------------T
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75484871  9 +  98207768 AT---------AGC-------------T--------------------A-T-------------T
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67549192  9 +  89017189 AT---------AGC-------------T--------------------A-T-------------T
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74324290  9 +  97876770 AT---------AGC-------------T--------------------A-T-------------T
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              7091  9 +     98495 GC---------CTT-------------T--------------------T-T-------------T
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 I 15
s Mustela_putorius.JH417978.1                             4419436  8 -  28371801 GC---------AT--------------T--------------------T-G-------------T
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     86568  3 -    117718 ------------------------------------------------T-T-------------T
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 5 C 0
s Myotis_brandtii.KE161952.1                               964538  8 +   8389877 GC---------TT--------------T--------------------T-T-------------T
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5016215  8 +   6462685 GC---------TT--------------T--------------------T-T-------------T
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3462124  8 -   3747815 GC---------TT--------------T--------------------T-T-------------T
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         7321  8 +     66751 GC---------TT--------------T--------------------T-T-------------T
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             2083  8 -      8794 TC---------GA--------------T--------------------A-T-------------T
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nasalis_larvatus.k141_153429                               4393  9 +     48152 GC---------ATA-------------A--------------------T-T-------------T
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4481284  8 -  14209539 GC---------AT--------------T--------------------T-G-------------G
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3947963  8 -   4490290 GC---------AT--------------G--------------------T-T-------------T
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  46325  8 +     94413 GC---------AT--------------T--------------------T-T-------------T
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1223136                          10160  9 -     11253 GC---------CTA-------------A--------------------T-T-------------T
i Nomascus_annamensis.k141_1223136                      C 0 C 0
s Nomascus_concolor.k141_468488                               803  9 -      1482 GC---------CTA-------------A--------------------T-T-------------T
i Nomascus_concolor.k141_468488                         I 22 I 28
s Nomascus_gabriellae.k141_906566                             792  9 -      2544 GC---------CTA-------------A--------------------T-T-------------T
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             21266  9 -  18771707 GC---------CTA-------------A--------------------T-T-------------T
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_844529                                   541  9 +      2124 GC---------CTA-------------A--------------------T-T-------------T
i Nomascus_siki_a.k141_844529                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                26746  8 +   3668941 GC---------AT--------------T--------------------T-G-------------T
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65563563 10 -  95554990 GC---------ATTTTTT---------T-------------------------------------
i Nycticebus_bengalensis.LG16                           C 0 I 1
s Nycticebus_coucang.k141_2051882                             408 10 +      6470 GC---------ATTTTTT---------T-------------------------------------
i Nycticebus_coucang.k141_2051882                       C 0 I 1
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65665930 13 +  89412551 GC---------ATTTTTT---------T--------------------T-T-------------T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Octodon_degus.JH651621.1                                3675125  3 +  10294119 ------------------------------------------------t-t-------------t
i Octodon_degus.JH651621.1                              I 5 I 14
s Odobenus_rosmarus.KB229369.1                             675942  8 -   3126709 GC---------AT--------------T--------------------T-G-------------T
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1076746  8 +   1425656 GC---------AT--------------G--------------------T-T-------------T
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         33908  8 +     78940 GC---------AC--------------G--------------------T-T-------------T
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  121215  6 +    145789 A----------CCT-------------T--------------------T----------------
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 I 1
s Onychomys_torridus.OnyTor_scaffold_12578                  33151 22 +     62360 AG---------TTT-------------T-------TTTTTTTTTTTTTT-T-------------T
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7221647  8 -   7562323 GC---------AT--------------G--------------------T-T-------------T
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              39878 17 -     66828 AGGTTTTTTGGTT--------------T--------------------T-T-------------T
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      304081  8 -    505867 GC---------AT--------------T--------------------T-G-------------T
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       35571 12 +     38679 GC---------ATCTTT----------T--------------------T-T-------------T
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18005009 15 -  38779656 gc---------att-------ttttttt--------------------t-t-------------t
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134074192  8 - 275406953 GC---------GT--------------G--------------------T-T-------------T
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      75406  8 +    140051 GC---------GT--------------G--------------------T-T-------------T
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.AJFE02000950.1                                 159  9 -      1008 GC---------ATA-------------A--------------------T-T-------------T
i Pan_paniscus.AJFE02000950.1                           I 24 C 0
s Pan_troglodytes.KZ622857.1                               324011  9 +    772158 GC---------ATA-------------A--------------------T-T-------------T
i Pan_troglodytes.KZ622857.1                            I 24 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  30526  8 +    295523 GC---------AT--------------T--------------------T-G-------------T
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3634130  8 +  18214204 GC---------AT--------------T--------------------T-G-------------T
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5023907  8 -   6340057 GC---------AT--------------T--------------------T-G-------------T
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1062907  8 -   1292953 GC---------AT--------------G--------------------T-T-------------T
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188152139  9 - 188283584 GC---------ATC-------------A--------------------T-T-------------C
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            48351  9 +     76494 GC---------ATC-------------A--------------------T-T-------------C
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47509535  9 +  47705337 GC---------ATC-------------A--------------------T-T-------------C
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 63518  9 -    104429 GC---------ATC-------------A--------------------T-T-------------C
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  13302  9 -     29451 GC---------ATC-------------A--------------------T-T-------------C
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                33707  9 +     35859 GC---------ATC-------------A--------------------T-T-------------C
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    111858  8 -    135482 GC---------AT--------------T--------------------T-G-------------T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           1802 12 -     23713 AC---------ATTTT----------AT--------------------T-T-------------T
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            21099 12 -     27972 GC---------ATTTT----------AT--------------------T-T-------------T
i Perodicticus_potto.k141_713187                        C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4946320 29 -   8017169 ag---------ttt-------------ttttttttttttgttttttttt-t-------------t
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            118264  8 -    122454 GC---------AT--------------G--------------------T-T-------------T
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           1394  9 -      3310 GC---------ATA-------------A--------------------T-T-------------T
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       21300  9 -     82327 GC---------ATA-------------A--------------------T-T-------------T
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           18051  9 +     19957 GC---------ATA-------------A--------------------T-T-------------T
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26736060  9 +  26888534 GC---------ATA-------------A--------------------T-T-------------T
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            93309  8 +    112873 GC---------TT--------------T--------------------T-T-------------T
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 I 1
s Pithecia_albicans.k141_991845                             39909  6 -     61926 ------------TA-------------A--------------------T-T-------------T
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        21338  6 +     78826 ------------TA-------------A--------------------T-T-------------T
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              5289  6 -     15800 ------------TA-------------A--------------------T-T-------------T
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                         8487  6 -     16101 ------------TA-------------A--------------------T-T-------------T
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          1796  6 +      9673 ------------TA-------------A--------------------T-T-------------T
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13470790  6 -  19735023 ------------TA-------------A--------------------T-T-------------T
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                            9698  6 -     31692 ------------TA-------------A--------------------T-T-------------T
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           2331  8 +     21690 GC---------AT--------------G--------------------T-T-------------T
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       19087  9 +     44506 GC---------ATA-------------A--------------------T-T-------------T
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        19305  9 +     67491 GC---------ATA-------------A--------------------T-T-------------T
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                       9550  9 -     98129 GC---------ATA-------------A--------------------T-T-------------T
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     19150  9 +    147771 GC---------ATA-------------A--------------------T-T-------------T
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        19401  9 -     23762 GC---------ATA-------------A--------------------T-T-------------T
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_2078842                         19349  9 -     19696 GC---------ATA-------------A--------------------T-T-------------T
i Plecturocebus_dubius.k141_2078842                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         19223  9 +    152463 GC---------ATA-------------A--------------------T-T-------------T
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      5980  9 +      8943 GC---------ATA-------------A--------------------T-T-------------T
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                          8940  9 +    134592 GC---------ATA-------------A--------------------T-T-------------T
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          19533  9 -     75465 GC---------ATA-------------A--------------------T-T-------------T
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              183577  9 -    373494 GC---------ATA-------------A--------------------T-T-------------T
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19803481  9 +  19899266 GC---------ATA-------------A--------------------T-T-------------T
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               1630  9 -     15069 GC---------ATA-------------A--------------------T-T-------------T
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              1764  9 +     14865 GC---------ATA-------------A--------------------T-T-------------T
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                72952 10 +     78963 AC---------TT--------------T------------------ATT-T-------------T
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6844961  9 +  12164890 AT---------GTT-------------T--------------------T-C-------------T
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     13396  9 -     30946 GC---------ATT-------------T--------------------T-C-------------C
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_diadema.k141_577245                           39431  9 +     52369 GC---------ATT-------------T--------------------T-C-------------C
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         31820  9 -     44753 GC---------ATT-------------T--------------------T-C-------------C
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            13742  9 +     27322 GC---------ATT-------------T--------------------T-C-------------C
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       13386  9 -     53241 GC---------ATT-------------T--------------------T-C-------------C
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         35657  9 -     48185 GC---------ATT-------------T--------------------T-C-------------C
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           29169  9 +     77221 ac---------att-------------t--------------------t-t-------------t
i Psammomys_obesus.NESX01026517.1                       C 0 I 2
s Pteronotus_parnellii.KE867983.1                             887  8 -     27784 GC---------AT--------------T--------------------T-T-------------T
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        241294  8 -    344369 GC---------AT--------------T--------------------T-G-------------T
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13243002  8 -  17261082 AT---------AT--------------T--------------------T-T-------------T
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             600956  8 -   3946241 AT---------AT--------------T--------------------T-T-------------T
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131530723  8 - 161321710 GC---------AT--------------T--------------------T-G-------------T
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             25755  9 +     56732 GC---------ATA-------------A--------------------T-T-------------T
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6802245  9 +   6970761 GC---------ATA-------------A--------------------T-T-------------T
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             1637  9 +     18040 GC---------ATA-------------A--------------------T-T-------------T
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                12832  8 +     68503 GC---------AT--------------G--------------------T-T-------------T
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13911119  9 +  90463843 AT---------ATT-------------T--------------------A-T-------------T
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1784602  8 +   2252614 GT---------GT--------------T--------------------T-T-------------T
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           12192  9 -     14454 GC---------ATA-------------A--------------------T-T-------------T
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206373518  9 - 206558726 GC---------ATA-------------A--------------------T-T-------------T
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44851166  9 -  45163003 GC---------ATA-------------A--------------------T-T-------------T
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                16305  8 +    109198 AC---------AT--------------T--------------------T-T-------------T
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       4478  8 +     12214 GC---------AT--------------G--------------------T-T-------------T
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15668958  9 -  43202129 GC---------ATA-------------A--------------------T-T-------------T
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                         833  9 +     34089 GC---------ATA-------------A--------------------T-T-------------T
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                               764  9 -     60842 GC---------ATA-------------A--------------------T-T-------------T
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                               833  9 +     67014 GC---------ATA-------------A--------------------T-T-------------T
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                               833  9 +     60816 GC---------ATA-------------A--------------------T-T-------------T
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                  761  9 -     76454 GC---------ATA-------------A--------------------T-T-------------T
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17337341  9 -  30362882 GC---------ATA-------------A--------------------T-T-------------T
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         16942  9 -     62485 GC---------ATA-------------A--------------------T-T-------------T
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   28378  8 -    114521 GC---------AT-T------------T--------------------T-T--------------
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1527475                       24180  9 +     26421 GT---------ATA-------------A--------------------T-T-------------T
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       4642  9 +     20762 GT---------ATA-------------A--------------------T-T-------------T
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         38375  9 +     40653 GT---------ATA-------------A--------------------T-T-------------T
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                            8934  9 -     12194 GT---------ATA-------------A--------------------T-T-------------T
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     22353  9 -     27512 GT---------ATA-------------A--------------------T-T-------------T
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         31374  9 -     33692 GT---------ATA-------------A--------------------T-T-------------T
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   94403  7 -    120886 AG---------CTT-------------T--------------------T----------------
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 I 1
s Solenodon_paradoxus.SolPar_flattened_line_1012            14600  8 +    739146 GC---------AT--------------T--------------------T-T-------------T
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2236261  6 +   2842873 AC---------AAT-------------T-------------------------------------
i Spermophilus_dauricus.KZ294190.1                      C 0 I 2
s Spilogale_gracilis.SpiGra_flattened_line_905             231006  8 -    276980 GC---------AT--------------T--------------------T-G-------------T
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            23971  8 +     62062 GC---------AT--------------T--------------------T-T-------------T
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189268898  9 + 218635234 gc---------at--------------t--------------------ttt-------------t
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        11292  9 -  13920577 GC---------ATA-------------A--------------------T-T-------------T
i Symphalangus_syndactylus.tarseq_24                    I 73 I 115
s Tadarida_brasiliensis.TadBra_scaffold_145589               2815  8 -      6213 GA---------GT--------------T--------------------T-T-------------T
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 I 28
s Tamandua_tetradactyla.TamTet_scaffold_26877               11761  8 +     45698 TC---------GA--------------T--------------------A-T-------------T
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      803755  8 +   1148477 GT---------AT--------------T--------------------T-T-------------T
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  54417  8 +     99546 GT---------AT--------------T--------------------T-T-------------T
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               23085 16 +     42269 GC---------ATTTTTTTTT------T--------------------T-T-------------T
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               56393 22 +     65473 GT---------ATTTTTTTTTTTTTTTT--------------------T-T-------------T
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194003674  9 - 194193292 GC---------ATC-------------A--------------------T-T-------------C
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                   627  8 +      6782 AA---------AA--------------T--------------------T-T-------------T
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  132893  8 -    259118 GC---------AT--------------T--------------------T-T-------------T
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        22752  9 +     38948 GT---------ATA-------------A--------------------T-T-------------T
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   16479  9 -     32910 GT---------ATA-------------A--------------------T-T-------------T
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       22377  9 +     24652 GT---------ATA-------------A--------------------T-T-------------T
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      1262  9 -      3559 GT---------ATA-------------A--------------------T-T-------------T
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           39201  9 -     54611 GT---------ATA-------------A--------------------T-T-------------T
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       15200  9 +     17312 GT---------ATA-------------A--------------------T-T-------------T
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    22570  9 -     25040 GT---------ATA-------------A--------------------T-T-------------T
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          1236  9 +      3528 GT---------ATA-------------A--------------------T-T-------------T
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  47598  9 +     51589 GT---------ATA-------------A--------------------T-T-------------T
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       10766  9 +     14732 GT---------ATA-------------A--------------------T-T-------------T
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       1244  9 -     28054 GT---------ATA-------------A--------------------T-T-------------T
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44656039  9 -  44834318 GT---------ATA-------------A--------------------T-T-------------T
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        1049  9 +      3372 GT---------ATA-------------A--------------------T-T-------------T
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   2243  8 +     90398 GC---------AT--------------T--------------------T-T-------------G
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16078340  8 +  31416278 AC---------TT--------------T--------------------T-T-------------T
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2787911  9 -   3938065 ga---------ACC-------------T--------------------T-T-------------T
i Tupaia_chinensis.KB320831.1                           I 282 I 10
s Tupaia_tana.TupTan_flattened_line_68454                     471  9 +     13056 GA---------ACC-------------T--------------------T-T-------------T
i Tupaia_tana.TupTan_flattened_line_68454               C 0 I 10
s Tursiops_truncatus.MRVK01000923.1                      69310365  8 -  96451834 GC---------AT--------------G--------------------T-T-------------T
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 23564  9 -     25548 GC---------AT-T------------T--------------------T-T-------------T
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6510992  8 +  28682327 GC---------AT--------------T--------------------T-A-------------T
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  1904  9 -     20643 AC---------ATT-------------T--------------------T-C-------------T
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             21449  9 -     33872 AC---------ATT-------------T--------------------T-C-------------T
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1521684  8 -   2331223 GC---------AT--------------T--------------------T-T-------------T
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                134146  8 -    281493 GC---------AC--------------T--------------------T-G-------------T
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       123460  6 -    134049 GC---------GTT-------------T-------------------------------------
i Xerus_inauris.XerIna_scaffold_7898                    C 0 I 2
s Zalophus_californianus.ZalCal_flattened_line_4097        210670  8 -    227762 GC---------AT--------------T--------------------T-G-------------T
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           3868  8 -      8775 GC---------AT--------------G--------------------T-T-------------T
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16291  1 -    119109 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     12283  2 -     20485 I
e Jaculus_jaculus.JH725517.1                              8561873  2 +  11848649 I
e Hylobates_pileatus_b.LG03                                     92553610  0 - 189753342 C
e Allactaga_bullata.AllBul_scaffold_70162                    8911  2 -     22067 I
e Nannospalax_galili.KL201303.1                            107431  0 +    362372 C
e Mesocricetus_auratus.KB708139.1                         1043022  0 -  26018355 C
e Dolichotis_patagonum.DolPat_scaffold_14102                33375  0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             56104 16 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                14631 16 +     26546 I
e Cricetulus_griseus.LT883672.1                          53025429  0 +  72327488 C
e Cavia_tschudii.CavTsc_scaffold_488                       173989  0 +    436027 C
e Cavia_porcellus.DS562889.1                             15795798  0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15783848 16 -  24422027 I
e Arctocebus_calabarensis.k141_1161114                      14526 30 +     17483 I

a score=0.000000
s hg38.chr4_GL000008v2_random                                8298 28 +    209709 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TC
s Acinonyx_jubatus.LLWD01000356.1                         2030391 28 +   3721120 C-------A----------TGT-GG---AAG-A------GG--ACG-TA-A-----AGAGA---A-T-TT
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    108660 20 -    189883 --------A---------ACAT-AG---AAG-A------TA--AAA-TA-T-----A-------------
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 I 3
s Ailuropoda_melanoleuca.LNAT01000321.1                  10653725 28 +  23371972 C-------A----------TGT-GG---AAG-A------GG--GTG-TA-A-----GGAGA---A-T-TT
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7090227 28 -  16596857 C-------G----------TGT-GG---AAG-A------GG--GTG-TA-A-----AGAGA---A-C-TT
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allenopithecus_nigroviridis.k141_3103707                  59321 28 +     61638 T-------A----------TGC-AG---AAG-A------GG--GAA-CA-A-----AGAGA---A-T-TT
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        51129 28 +     53391 T-------A----------TGC-AG---AAG-A------GG--GAA-CA-A-----AGAGA---A-T-TT
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         1853 28 +     72529 T-------A----------TGC-AG---AAG-A------GG--GAA-CA-A-----AGAGA---A-T-TT
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          1429 28 +      3797 T-------A----------TGC-AG---AAG-A------GG--GAA-CA-A-----AGAGA---A-T-TT
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             6523 27 -     18050 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A------GAGA---A-T-TT
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  7640 27 -     11521 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A------GAGA---A-T-TT
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              7198 27 -     21359 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A------GAGA---A-T-TT
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1856473                                5581 27 +      7227 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A------GAGA---A-T-TT
i Alouatta_juara.k141_1856473                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          6496 26 -     10438 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A------G-GA---A-T-TT
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            3150 27 +      7047 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A------GAGA---A-T-TT
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             6434 27 +     10410 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A------GAGA---A-T-TT
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1374428                             237 27 -     25526 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A------GAGA---A-T-TT
i Alouatta_puruensis.k141_1374428                       I 9 C 0
s Alouatta_seniculus.k141_990213                             3155 27 +      6429 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A------GAGA---A-T-TT
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3516886 28 +   4113121 C-------A----------TGT-GA---CAG-A------GG--GAA-TA-A-----AGAGA---A-T-TG
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      387348 26 -    631301 C-------A----------TGT-GG---AA--A------GG--GAG-T--A-----AGAGG---A-T-TT
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            27794 28 +     33004 C-------A----------TGT-GA---CAG-A------GA--GAA-TA-A-----AGAAG---A-T-TT
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 58828 28 +     78111 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            1759 28 +     22701 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5745719 28 +   9889416 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGaga---a-t-tt
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             2311 28 -    104377 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               2311 28 +     23246 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Aotus_vociferans.k141_718647                          C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 5447 26 -     29036 C-------A----------TGT-GA---AG--A------GG--GAG-T--A-----ATAGA---A-T-TT
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9535573 27 +  39197703 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A------GAGA---A-T-TT
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             56861 27 +     85812 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A------GAGA---A-T-TT
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 7858 27 +     89302 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A------GAGA---A-T-TT
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             12367 27 -     58268 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A------GAGA---A-T-TT
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             60355 27 +    119057 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A------GAGA---A-T-TT
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               2305 27 -     25888 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A------GAGA---A-T-TT
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 3160 28 -     16375 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_767228                               9132 28 -      9688 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Avahi_peyrierasi.k141_767228                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26377098 28 +  51448160 C-------A----------TGC-GG---CAG-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        2329 28 -     13118 C-------A----------TGT-GG---CAG-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   39986 28 -     72089 C-------G----------TGT-GA---CAG-A------GG--GAA-TA-A-----AGAGA---A-T-TG
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6556408 28 +   6870073 C-------A----------TGT-GA---CAG-A------GG--GAA-TA-A-----AGAGA---A-T-TG
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138136639 28 - 161108492 C-------A----------TGT-GA---CAG-A------GG--GAA-TA-A-----AGAGA---A-T-TG
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     569017 28 -    998990 C-------A----------TGT-GA---CAG-A------GG--GAA-TA-A-----AGAGA---A-T-TG
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136292372 28 - 158972876 C-------A----------TGT-GA---CAG-A------GG--GAA-TA-A-----AGAGA---A-T-TG
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1227993 28 -   1914593 C-------A----------TGT-GA---CAG-A------GG--GAA-TA-A-----AGAGA---A-G-TG
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               110202 28 -    171031 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                  9228 28 +    125063 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                11276 28 -    216513 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        3815 28 -    134917 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3216130 28 -   8989139 C-------A----------TGT-GG---AAG-A------GG--GAA-TA-C-----AGAGA---A-T-TT
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           394314 28 -  15254737 C-------A----------TGT-GG---AAG-A------GG--GAA-TA-C-----AGAGA---A-T-TT
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2970051 28 +   6889770 C-------A----------TGT-GG---AAG-A------GG--GAA-TA-C-----AGAGA---A-T-TT
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11515114 26 +  39901454 C-------A----------TGT-GG---AAG-A------GG--GTG-TA-A-----AGAGA---A-T---
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   10131 26 +     87036 C-------A----------TGT-GG---AAG-A------GG--GTG-TA-A-----AGAGA---A-T---
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11261773 26 -  35597290 C-------A----------TGT-GG---AAG-A------GG--GTG-TA-A-----AGAGA---A-T---
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11084302 26 +  39895921 C-------A----------TGT-GG---AAG-A------GG--GTG-TA-A-----AGAGA---A-T---
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16451336 26 -  44759192 C-------A----------TGT-GG---AAG-A------GG--GTG-TA-A-----AGAGA---A-T---
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21321993 28 + 157394656 C-------A----------TGT-GA---CAG-A------GG--GAA-TA-A-----AGAGA---A-T-TG
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135703220 28 - 157403528 C-------A----------TGT-GA---CAG-A------GG--GAA-TA-A-----AGAGA---A-T-TG
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_647363                   833 14 +      1887 T-------A-------CCATGG-AA---AAG-C-------------------------------------
i Capromys_pilorides.CapPil_scaffold_647363             C 0 I 16
s Carlito_syrichta.NW_007248099.1                          305611 28 +    345090 t-------a----------ctc-ag---AAG-A------AG--GAA-TA-A-----AGAGA---A-T-CT
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               56527 24 +     67245 C-------A----------TGT-GG---AG--A------GA--GAG-T--A-----A--GA---A-T-TT
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   27045 28 +     33760 T-------AT-------AATAT-AA---TAT-A------AT--ATA-TA-T-----GTATA---T-----
i Castor_canadensis.CasCan_scaffold_47037               C 0 I 4
s Catagonus_wagneri.CatWag_scaffold_1305                   155844 28 -    276539 C-------A----------TGT-GG---AAG-A------AG--GAA-TA-A-----GGAGA---A-T-TT
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18887041 28 -  29618158 T-------G----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 4587 28 -     26817 T-------G----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                 8827 28 +     25043 T-------G----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         4660 28 +     21754 T-------A----------CTC-AG---AAG-A------AG--GAA-TA-A-----AGAGA---A-T-CT
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4360312 26 +   7569818 C-------A----------G---GG---AAG-A------GG--GAG-TA-A-----AGAGA---A-T-TT
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_520758          314 26 -       446 C-------A----------G---GG---AAG-A------GG--GAG-TA-A-----AGAGA---A-T-TT
i Ceratotherium_simum_cottoni.CerCot_scaffold_520758    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6551117 28 +   6739814 T-------A----------TGC-AG---AAG-A------GG--GAA-CA-A-----AGaga---a-t-tt
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      52594 28 -     54931 T-------A----------TGC-AG---AAG-A------GG--GAA-CA-A-----AGAGA---A-T-TT
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         17578 28 -     19697 T-------A----------TGC-AG---AAG-A------GG--GAA-CA-A-----AGAGA---A-T-TT
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         55109 28 -    107033 T-------A----------TGC-AG---AAG-A------GG--GAA-CA-A-----AGAGA---A-T-TT
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        1552 28 -      3853 T-------A----------TGC-AG---AAG-A------GG--GAA-CA-A-----AGAGA---A-T-TT
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          25484 28 +     30494 T-------A----------TGC-AG---AAG-A------GG--GAA-CA-A-----AGAGA---A-T-TT
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           1507 28 -      4022 T-------A----------TGC-AG---AAG-A------GG--GAA-CA-A-----AGAGA---A-T-TT
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          1399 28 -      3505 T-------A----------TGC-AG---AAG-A------GG--GAA-CA-A-----AGAGA---A-T-TT
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           20205 28 +     35983 T-------A----------TGC-AG---AAG-A------GG--GAA-CA-A-----AGAGA---A-T-TT
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11986727 28 +  12117833 T-------A----------TGC-AG---AAG-A------GG--GAA-CA-A-----AGAGA---A-T-TT
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46473480 28 +  46592721 T-------A----------TGC-AG---AAG-A------GG--GAA-CA-A-----AGAGA---A-T-TT
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      31307 28 +     33420 T-------A----------TGC-AG---AAG-A------GG--GAA-CA-A-----AGAGA---A-T-TT
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        1343 28 -      3443 T-------A----------TGC-AG---AAG-A------GG--GAA-CA-A-----AGAGA---A-T-TT
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      2334 28 -      4669 T-------A----------TGC-AG---AAG-A------GG--GAA-CA-A-----AGAGA---A-T-TT
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        2135 28 -      4411 T-------A----------TGC-AG---AAG-A------GG--GAA-CA-A-----AGAGA---A-T-TT
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         1658 28 -      4205 T-------A----------TGC-AG---AAG-A------GG--GAA-CA-A-----AGAGA---A-T-TT
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           55496 28 -     68416 T-------A----------TGC-AG---AAA-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            4545 28 +     13308 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             1840 28 -     18223 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             18863 28 +     25473 T-------A----------TGC-AG---AAA-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           37902 28 +     57117 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          42577 28 +     54541 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15958000 15 +  43084221 -------------------------------------------aaa-tt-a-----aatta---a-t-tt
i Chinchilla_lanigera.JH721867.1                        I 14 C 0
s Chiropotes_israelita.k141_1189915                         67423 28 +    196370 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          11597 28 +     40510 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15134938 28 -  15256731 T-------A----------TGC-AG---AAG-A------GG--GAA-CA-A-----AGAGA---A-T-TT
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      29984 28 -     53260 T-------A----------TGC-AG---AAG-A------GG--GAA-CA-A-----AGAGA---A-T-TT
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101140432 28 + 101219884 T-------A----------TGC-AG---AAG-A------GG--GAA-CA-A-----AGaga---a-t-tt
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                13531 25 -     21363 T-------A----------TAC-AG---AAG-A------GT--TAG-TA-A-----AAAGA---A-----
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           758837 25 +    964067 T-------A----------TAC-AG---AAG-A------GT--TAG-TA-A-----AAAGA---A-----
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_141308              5622  3 -     12508 N-------N----------N--------------------------------------------------
i Chrysochloris_asiatica.ChrAsi_scaffold_141308         C 0 M 53
s Colobus_angolensis.KN985967.1                          10879014 28 +  10971483 T-------A----------tgc-ag---aag-a------gg--gaa-aa-a-----agaga---a-t-tt
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147660173 28 + 156195979 T-------A----------TGC-AG---AAG-A------GG--GAA-AA-A-----AGAGA---A-T-TT
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            12158 28 +     23629 T-------A----------TGC-AG---AAG-A------GG--GAA-CA-A-----AGAGA---A-T-TT
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60609792 18 +  78930452 c-------a----------tgc-aT---TAG-A------GG--GAG-TA---------------------
i Condylura_cristata.JH655880.1                         C 0 I 8
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         36232 17 -     40477 C-------A----------CGT-GG---AAG-A------GG--AAA-T----------------------
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 I 8
s Cricetomys_gambianus.CriGam_scaffold_949                 274098 28 -    399297 --------A---------ATGC-TA---AAG-A------TA--AAA-TA-A-----AGGTA---A-G-TT
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             15732 34 -     19186 C-------A----------TTT-GG---AAG-AGTAAACAG--AAC-GA-A-----ACAGA---A-A-GA
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 I 1
s Cryptoprocta_ferox.CryFer_flattened_line_19014            48418 28 -     70449 C-------A----------TGT-GG---AAG-A------GG--ACG-TA-A-----AGAGA---A-T-TT
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  204819 31 -    956709 T-------A-------ACATGA-AA---CAG-G------GG--GAA-AA-A-----AGATA---A-T-TT
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 27008 15 -     67205 -------------------------------------------AAA-TT-A-----AGTTA---A-t-tt
i Ctenomys_sociabilis.CteSoc_scaffold_19489             I 16 C 0
s Dasypus_novemcinctus.JH568778.1                          178706 25 -   6883506 T-------A----------TAT-AG---AAA-A------GG--TAG-TA-A-----AAAGA---A-----
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16841370 28 +  31942871 A-------A----------TGC-AG---AAG-A------GG--AAA-TA-A-----AGAGG---A-T-TT
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80033837 28 -  96802777 C-------A----------TGT-GG---CAG-A------GG--GAA-TA-A-----AGAGA---A-T-TG
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18695835 26 -  18957592 C-------A----------TGT-GG---AA--A------GG--GAG-T--A-----GGaga---a-t-tt
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 318969 26 +    993696 C-------G----------T---GA---AAG-A------GG--GAG-TA-A-----AGAGA---A-T-TT
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_170113                  232 26 +       818 C-------A----------G---GG---AAG-A------GG--GAG-TA-A-----AGAGA---A-T-TT
i Diceros_bicornis.DicBicMic_scaffold_170113            C 0 C 0
s Dipodomys_ordii.KN672545.1                              3652140 15 +   4240102 -------------------------------------------aaa-ta-a-----agaaa---a-t-gt
i Dipodomys_ordii.KN672545.1                            N 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 23694 15 +     28912 -------------------------------------------AAA-TA-A-----AGAAA---A-T-GT
i Dipodomys_stephensi.DipSte_scaffold_44365             N 0 C 0
s Echinops_telfairi.JH980316.1                           22991117 18 -  44670279 --------------------------------a-----cag---gg-aa-g-----acAGA---A-C-TT
i Echinops_telfairi.JH980316.1                          I 241 C 0
s Eidolon_helvum.KE772537.1                                  9217 25 +     24177 t-------a----------tgt-gG---AAG-A------GG--CTA-TA-A-----AGAga---c-----
i Eidolon_helvum.KE772537.1                             C 0 I 2
s Elaphurus_davidianus.JRFZ01086400.1                     1488531 28 +   1727528 C-------A----------TGT-GA---CAG-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7803256 29 +  15467074 t-------a----------taa-gg---aag-a-----gag---aa-ta-a-----aaaga---a-catt
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        235744 28 -    369425 --------A---------ATgt-ag---aat-a------tg--aaa-ta-a-----aaata---a-a-tt
i Ellobius_lutescens.LOEQ01003611.1                     I 1 C 0
s Ellobius_talpinus.LOJH01090055.1                           2754 16 -      7838 --------A---------ATgt-ag---aag-a------tg--aaa------------------------
i Ellobius_talpinus.LOJH01090055.1                      I 1 I 10
s Enhydra_lutris.KZ291749.1                              85867034 18 +  99434291 C-------A----------CAT-GG---AAG-A------GA--GTG-TA---------------------
i Enhydra_lutris.KZ291749.1                             C 0 I 10
s Equus_asinus.JREZ01000137.1                             2952229 16 -   4388051 C-------A----------T---GG---AAG-A------GG--GAG-TA---------------------
i Equus_asinus.JREZ01000137.1                           C 0 I 9
s Equus_caballus.CM000402.2                              13346240 16 +  41866177 C-------A----------T---GG---AAG-A------GG--GAG-TA---------------------
i Equus_caballus.CM000402.2                             C 0 I 9
s Equus_przewalskii.ATBW01073585.1                           8232 16 +     92910 C-------A----------T---GG---AAG-A------GG--GAG-TA---------------------
i Equus_przewalskii.ATBW01073585.1                      C 0 I 9
s Erythrocebus_patas.Contig8                             48767117 28 -  48907691 T-------A----------TGC-AG---AAG-A------GG--GAA-CA-A-----AGAGA---A-T-TT
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          311982 28 +    330699 C-------A----------TGT-GG---CAG-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             58411 28 +     89355 C-------A----------TGT-GG---CAG-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              1566 28 +     13586 T-------A----------TGC-AG---AAG-A------CA--GAA-TA-A-----AGAGA---A-T-TT
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               1503 28 -      6809 T-------A----------TGC-AG---AAG-A------CA--GAA-TA-A-----AGAGA---A-T-TT
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             7974 28 +     36558 T-------A----------TGC-AG---AAG-A------CA--GAA-TA-A-----AGAGA---A-T-TT
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             4291 28 +     60246 T-------A----------TGC-AG---AAG-A------CA--GAA-TA-A-----AGAGA---A-T-TT
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 7779 28 +    109717 T-------A----------TGC-AG---AAG-A------CA--GAA-TA-A-----AGAGA---A-T-TT
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               12153 28 +     16540 T-------A----------TGC-AG---AAG-A------CA--GAA-TA-A-----AGAGA---A-T-TT
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                12430 28 +     27497 T-------A----------TGC-AG---AAG-A------CA--GAA-TA-A-----AGAGA---A-T-TT
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           14886 28 +     26808 T-------A----------TGC-AG---AAG-A------CA--GAA-TA-A-----AGAGA---A-T-TT
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                29619 28 +     46535 T-------A----------TGC-AG---AAG-A------CA--GAA-TA-A-----AGAGA---A-T-TT
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              12342 28 -     29447 T-------A----------TGC-AG---AAG-A------CA--GAA-TA-A-----AGAGA---A-T-TT
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129889371 28 - 159252932 C-------A----------TGT-GG---AAG-A------GG--ACG-TA-A-----AGAGA---A-T-TT
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129276445 28 - 158578461 C-------A----------TGT-GG---ACG-A------GG--ATG-TA-A-----AGACA---A-T-TT
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 17580 28 +     52776 C-------A----------TGT-GG---AAG-A------GG--ACG-TA-A-----AGAGA---A-T-TT
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13889589 10 -  19261668 --------------------------------------------------------aatca---att-tt
i Fukomys_damarensis.KN123630.1                         I 21 C 0
s Galago_moholi.ctg555                                     207515 28 -    847004 T-------A----------TTC-AG---AAG-A------GG--GAA-TA-A-----AGAGG---A-T-TT
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                            9895 28 -     43889 T-------A----------TTC-AG---AAG-A------GG--GAA-TA-A-----AGAGG---A-T-TT
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           6944 28 +     27357 T-------A----------TTC-AG---AAG-G------GG--GAA-TA-A-----AGAGG---A-T-TT
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               152828 29 +    324696 T-------A----------TGT-GG---AAG-A------GG--GAAGTA-A-----AGAGA---A-T-TT
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    178044 28 -    189561 C-------A----------TAT-GA---CAG-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                            9256  8 -     18683 ------------------------------------------------------------AAAGA-T-AA
i Glis_glis.GliGli_scaffold_79770                       I 16 C 0
s Gorilla_beringei.k141_111300                               1691 28 -     14630 T-------A----------TGC-AG---AAG-A------GT--GAA-TA-A-----AGAGA---A-T-TC
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119648789 28 - 195582420 T-------A----------TGC-AG---AAG-A------GT--GAA-TA-A-----AGAGA---A-T-TC
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   73807  8 +    118900 ------------------------------G-A------GG--AAA-T----------------------
i Graphiurus_murinus.GraMur_scaffold_4493               I 8 I 8
s Hapalemur_alaotrensis.k141_1198205                         2114 28 +      3980 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             24594 28 +     26611 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             2048 28 +     56096 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        25321 28 -     42470 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        41918 28 -     54384 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              13622 28 +     53719 C-------A----------TGT-AG---AAG-A------GG--ACG-TA-A-----AGAGA---A-T-TT
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                24398 28 -     91191 C-------A----------TGT-GA---CAG-A------GG--GAA-TA-A-----AGAGA---A-C-TG
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2547679 15 +  31725842 t------ca-------atgtaa-a----aaagc-------------------------------------
i Heterocephalus_glaber.JH602058.1                      I 2 I 16
s Heterohyrax_brucei.HetBruBak_scaffold_25354               53098 29 +     73687 T-------A----------TAC-GG---AAG-A-----CAG--AGT-GA-T-----AAAAA---A-C-TT
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              144107 28 +    277961 C-------A----------TGT-GG---CAA-A------GG--AAA-TA-A-----AGAGA---A-T-TT
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      275527 28 -    477199 C-------A----------TGT-GG---AAG-A------GA--AAG-TA-A-----AGaga---a-t-tt
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              4681 28 -      9143 C-------A----------TGT-GG---AAG-A------GG--AAG-TA-A-----AGAGA---A-T-TT
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg649                                    98363 28 +    115816 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TC
i Hoolock_leuconedys.ctg649                                C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 12690 28 -     67322 C-------A----------TGT-GG---AAG-A------GG--ACG-TT-A-----AGAGA---A-T-TT
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hylobates_abbotti.k141_493872                              1500 28 +      5897 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TC
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_282275                                713 28 +      1846 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TC
i Hylobates_agilis.k141_282275                          C 0 C 0
s Hylobates_klossii.k141_466549                              7958 28 +     11537 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TC
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_muelleri.k141_1133650                             935 28 -      2775 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TC
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             29537 28 -     60944 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TC
i Hylobates_pileatus_a.tarseq_592                         I 36 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     2665 14 +     22540 -------------------------------------------GAC-AT-T-----AGTTA---A-T--T
i Hystrix_cristata.HysCri_scaffold_50788                I 14 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7122343 20 +  13083262 T-------AAT-------GTGg-aa-----g-a------aataaga-t----------------------
i Ictidomys_tridecemlineatus.JH393315.1                 I 2 I 5
s Indri_indri.k141_3334527                                   8558 28 +      9207 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Indri_indri.k141_3334527                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               5764 28 +     17520 C-------A----------TGT-GG---CAG-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               20596 28 +     37189 C-------A----------TGT-GG---CCA-A------GG--GAA-CA-A-----AGAGA---A-T-TT
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          46416 27 -    147782 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A------GAGA---A-T-TT
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   110711 28 -    115756 C-------A----------TGT-GG---AAG-A------GG--GAG-TA-A-----AGCAA---G-T-TT
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258403597 28 - 285822530 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        20491 28 +     39228 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            49867 28 +     63517 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        75087 28 +    116806 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     28128 28 -     33031 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3082393 28 -   3498232 C-------A----------TGT-GG---AAG-A------GG--GTG-TA-G-----AGAGA---A-T-TT
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lipotes_vexillifer.KE558548.1                            132939 28 +   3060487 C-------A----------TGT-GG---CAG-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19244203 28 +  19376315 T-------A----------TGC-AG---AAG-A------GG--GAA-CA-A-----AGAGA---A-T-TT
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            7237 35 +     84689 TTTTTTTAA----------GTC-AG---AAG-A------GG--GAA-TA-A-----AGAGG---A-T-TT
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3774995 28 +   6799190 T-------A----------GTC-AG---AAG-A------GG--GAA-TA-A-----AGAGG---A-T-TT
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20587672 29 -  62548349 T-------a----------tat-ga---gag-a-----ata--aaa-aa-a-----aaaaa---a-c-tt
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11083758 26 +  39895028 C-------A----------TGT-GG---AAG-A------GG--GTG-TA-A-----AGAGA---A-T---
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             15889 28 +     74745 T-------A----------TGC-AG---AAG-A------GG--TAA-CA-A-----AGAGA---A-T-TT
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12702395 28 +  12821369 T-------A----------TGC-AG---AAG-A------GG--TAA-TA-A-----AGAGA---A-T-TT
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               4488 28 +      6569 T-------A----------TGC-AG---AAG-A------GG--TAA-CA-A-----AGAGA---A-T-TT
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           42788 28 +     63263 T-------A----------TGC-AG---AAG-A------GG--TAA-CA-A-----AGAGA---A-T-TT
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_1068107                               11365 28 +     12679 T-------A----------TGC-AG---AAG-A------GG--TAA-CA-A-----AGAGA---A-T-TT
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                 938 28 +      3017 T-------A----------TGC-AG---AAG-A------GG--TAA-CA-A-----AGAGA---A-T-TT
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  42550 28 -     79256 T-------A----------TGC-AG---AAG-A------GG--TAA-CA-A-----AGAGA---A-T-TT
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196031470 28 + 196197964 T-------A----------TGC-AG---AAA-A------GG--TAA-CA-A-----AGaga---a-t-tt
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11441574 28 +  11645122 T-------A----------TGC-AG---AAG-A------GG--TAA-CA-A-----AGaga---a-t-tt
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   1500 28 -     46448 T-------A----------TGC-AG---AAG-A------GG--TAA-CA-A-----AGAGA---A-T-TT
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                1327 28 -      3617 T-------A----------TGC-AG---AAG-A------GG--TAA-CA-A-----AGAGA---A-T-TT
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 11660 28 -     55006 T-------A----------TGC-AG---AAG-A------GG--TAA-CA-A-----AGAGA---A-T-TT
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43836699 28 +  43892939 T-------A----------TGC-AG---AAG-A------GG--TAA-CA-A-----AGAGA---A-T-TT
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                3922 28 -      5978 T-------A----------TGC-AG---AAG-A------GG--GAA-CA-A-----AGAGA---A-T-TT
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               1502 28 -     27140 T-------A----------TGC-AG---AAG-A------GG--TAA-CA-A-----AGAGA---A-T-TT
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43433363 28 -  43563597 T-------G----------TGC-AG---AAG-A------GG--GAA-CA-A-----AGAGA---A-T-TT
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4446189 28 -   4543643 T-------A----------TGC-AG---AAG-A------GG--GAA-CA-A-----AGAGA---A-T-TT
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            143005 29 +    252755 C-------A----------TGTTGG---AAA-A------AG--GAG-TA-A-----AGAGA---A-T-TT
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             33069 29 +     58827 C-------A----------TGTTGG---AAA-A------AG--GAG-TA-A-----AGAGA---A-T-TT
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36870190 20 +  64221397 T-------AAT-------GTGg-aa-----g-a------aataaga-t----------------------
i Marmota_marmota.CZRN01000005.1                        I 2 I 5
s Mellivora_capensis.MelCap_flattened_line_1828            224591 28 -    226874 C-------A----------CGT-GG---AAG-A------GA--GTG-TA-A-----AGAGA---A-T-TT
i Mellivora_capensis.MelCap_flattened_line_1828         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233                8120 28 +     15977 --------A---------ATAC-AG---AAG-A------TA--AAA-CA-A-----GGATA---A-G-TT
i Meriones_unguiculatus.MerUng_scaffold_52233           I 2 C 0
s Mesocricetus_auratus.KB708139.1                         1043022 16 -  26018355 ----------------------------------------g--aaa-ta-a-----ggaaa---a-a-tt
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_183284                    635 28 +      2166 C-------A----------CGT-GG---CAG-A------GG--GAA-TG-A-----AGAGA---A-T-TT
i Mesoplodon_bidens.MesBid_scaffold_183284              C 0 C 0
s Microcebus_murinus.CM007691.1                          16506712 28 +  47401472 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-C-----agaga---a-t-tt
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  28059 18 -     48017 --------------------------------A-----CAG---GG-AT-G-----ATAGA---A-C-TT
i Microgale_talazaci.MicTal_scaffold_34660              I 237 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               19684 26 -     32043 C-------A----------TGT-GG---AA--A------GG--GAG-T--A-----AGAGA---A-T-TT
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22815399 28 -  98408828 --------A---------ATgt-ag---aag-a------tg--aaa-ta-a-----agata---a-a-ct
i Microtus_ochrogaster.CM001673.1                       I 1 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8206419 19 +  10048721 C-------A----------TGT-GG---AAG-A------GA--GAG-TA-A-------------------
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            31100 19 +     45743 C-------A----------TGT-GG---AAG-A------GA--GAG-TA-A-------------------
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        32037 28 +     34273 T-------A----------TGC-AG---AAG-A------GG--GAA-CA-A-----AGAGA---A-T-TT
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         7691 28 -    104932 C-------A----------TGT-GG---AAG-A------GG--GTG-TA-T-----AGAGA---A-T-TT
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     2126 28 +      8497 T-------A----------TAC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 143362 28 +    154973 C-------A----------TGT-GG---CAG-A------GG--GAA-TA-A-----AGAGA---A-T-TG
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                158004 26 +    265003 C-------A----------TAT-GG---AA--A------GG--AAG-T--A-----AGAGA---A-T-TT
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 1629 28 -      4346 C-------A----------TGT-GA---CAG-A------GG--GAA-TA-A-----AGAGA---A-T-TG
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  141312 28 -    168139 C-------A----------TGT-AG---AAG-A------GG--ATG-CA-A-----AGAGA---A-T-TT
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          16219 28 -    100666 C-------A----------TAT-GA---AAG-A------GG--GAG-TA-A-----AGCAA---T-T-TT
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70761586 29 +  92629107 --------G---------ATat-gg---aag-a------tg--aaa-ta-aa-ataagagt---c-----
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75484880 30 +  98207768 --------G---------GTat-ag---aag-a------ta--aaa-ta-aagacaagagT---C-----
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67549201 25 +  89017189 --------G---------atat-ag---aag-a------ta--aaa-ta-a-----agagt---C-----
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74324299 30 +  97876770 --------G---------gtat-ag---aag-a------ta--aaa-ta-aagacaagagt---C-----
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              7115  5 +     98495 ------------------------------------------------------------A---T-T-TT
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 15 I 657
s Mustela_putorius.JH417978.1                             4419444 28 -  28371801 C-------A----------CGT-GG---AAG-A------GA--GTG-TA-A-----AGAGA---A-T-TT
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     86571 14 -    117718 T-------A-------CCATGG-AA---AAG-C-------------------------------------
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 I 14
s Myotis_brandtii.KE161952.1                               964546 28 +   8389877 C-------A----------TAT-GG---AAG-A------GG--GAG-TA-A-----AGCaa---g-t-tt
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5016223 28 +   6462685 C-------A----------TAT-GG---AAG-A------GT--GAG-TA-A-----AGCaa---g-t-tt
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3462132 28 -   3747815 C-------A----------TAT-GG---AAG-A------GA--GAG-TA-A-----AGCaa---g-t-tt
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         7329 28 +     66751 C-------A----------TAT-GG---AAG-A------GG--GAG-TA-A-----AGCAA---G-T-TT
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             2091 25 -      8794 T-------A----------TAC-AG---AAA-A------GG--TAA-CA-A-----AAAGA---A-----
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nasalis_larvatus.k141_153429                               4402 28 +     48152 T-------A----------TGC-AG---AAG-A------GG--GAA-CA-A-----AGAGA---A-T-TT
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4481292 28 -  14209539 C-------A----------TGT-GG---AAG-A------GG--GTG-TA-G-----AGAGA---A-T-TT
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3947971 28 -   4490290 C-------A----------TGT-GG---CAG-A------GG--GAA-TA-A-----AGAGA---A-T-TG
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  46333 28 +     94413 C-------A----------TGT-GG---AA--A------GG--GAG-TATA-----AAACA---A-T-TA
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1223136                          10169 28 -     11253 T-------A----------TGC-AG---AAT-A------GG--GAA-TA-A-----AGAGA---A-T-TC
i Nomascus_annamensis.k141_1223136                      C 0 C 0
s Nomascus_concolor.k141_190193                               425 28 -      1094 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TC
i Nomascus_concolor.k141_190193                         I 9 I 5
s Nomascus_gabriellae.k141_906566                             801 28 -      2544 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TC
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             21275 28 -  18771707 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TC
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_844529                                   550 28 +      2124 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TC
i Nomascus_siki_a.k141_844529                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                26754 26 +   3668941 C-------A----------TGT-GG---AAG-A------GG--GTG-TA-A-----AGAGA---A-T---
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65563574 28 -  95554990 T-------A----------TTC-AG---AAG-A------GG--GAA-TA-A-----AGAGG---A-T-TT
i Nycticebus_bengalensis.LG16                           I 1 C 0
s Nycticebus_coucang.k141_2051882                             419 28 +      6470 T-------A----------TTC-AG---AAG-A------GG--GAA-TA-A-----AGAGG---A-T-TT
i Nycticebus_coucang.k141_2051882                       I 1 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65665943 28 +  89412551 T-------A----------TTC-AG---AAG-A------GG--GAA-TA-A-----AGAGG---A-T-TT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Octodon_degus.JH651621.1                                3675142 15 +  10294119 -------------------------------------------aaa-tt-a-----agata---a-t-tt
i Octodon_degus.JH651621.1                              I 14 C 0
s Odobenus_rosmarus.KB229369.1                             675950 28 -   3126709 C-------A----------TGT-GG---AAG-A------GG--GTG-CA-G-----AGAGA---A-T-TT
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1076754 28 +   1425656 C-------A----------TGT-GA---TAG-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         33916 28 +     78940 C-------A----------TAT-GA---CAG-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  121222 28 +    145789 --------A---------ATGT-AG---AAG-A------TG--AAA-TG-A-----AGATA---A-A-TT
i Ondatra_zibethicus.OndZib_scaffold_6821               I 1 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  33173 28 +     62360 --------A---------ATGT-AG---AAG-A------TG--AAA-TA-A-----AGATA---A-G-TT
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7221655 28 -   7562323 C-------A----------TGT-GG---CGG-A------GG--GAA-TA-A-----AGAGA---A-T-TG
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              39895 41 -     66828 T-------TTTTTTTTTTTTTT-GGTCTAGA-AG-----AG---AG-TA-A-----AAAGA---A-C-TT
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      304089 26 -    505867 C-------A----------TGT-GG---AAG-A------GG--GTG-TA-A-----AGAGa---a-t---
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       35583 28 +     38679 T-------A----------TTC-AG---AAG-A------GG--GAG-TA-A-----AGAGG---A-T-TT
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18005024 28 -  38779656 t-------a----------ttc-ag---aag-a------GG--GAG-TA-A-----AGAGG---A-T-TT
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134074200 28 - 275406953 C-------A----------TGT-GA---CAG-A------GG--GAA-TA-A-----AGAGA---A-T-TG
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      75414 28 +    140051 C-------A----------TGT-GA---CAG-A------GG--GAA-TA-A-----AGAGA---A-T-TG
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.AJFE02000950.1                                 168 28 -      1008 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TC
i Pan_paniscus.AJFE02000950.1                           C 0 I 83
s Pan_troglodytes.KZ622857.1                               324020 28 +    772158 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TC
i Pan_troglodytes.KZ622857.1                            C 0 I 83
s Panthera_onca.PanOnc_flattened_line_1615                  30534 28 +    295523 C-------A----------TGT-GG---AAG-A------GG--ACG-TA-A-----AGAGA---A-T-TT
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3634138 28 +  18214204 C-------A----------TGT-GG---AAG-A------GG--ACG-TA-A-----AGAGA---A-T-TT
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5023915 28 -   6340057 C-------A----------TGT-GG---AAG-A------GG--ACG-TA-A-----AGAGA---A-T-TT
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1062915 28 -   1292953 C-------A----------TGT-GA---CAG-A------GG--GAA-TA-A-----AGAGA---A-T-TG
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188152148 28 - 188283584 T-------A----------TGC-AG---AAG-A------GG--GAA-CA-A-----AGaga---a-t-tt
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            48360 28 +     76494 T-------A----------TGC-AG---AAG-A------GG--GAA-CA-A-----AGAGA---A-T-TT
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47509544 28 +  47705337 T-------A----------TGC-AG---AAG-A------GG--GAA-CA-A-----AGAGA---A-T-TT
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 63527 28 -    104429 T-------A----------TGC-AG---AAG-A------GG--GAA-CA-A-----AGAGA---A-T-TT
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  13311 28 -     29451 T-------A----------TGC-AG---AAG-A------GG--GAA-CA-A-----AGAGA---A-T-TT
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                33716 28 +     35859 T-------A----------TGC-AG---AAG-A------GG--GAA-CA-A-----AGAGA---A-T-TT
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    111866 28 -    135482 C-------A----------TGT-GG---AAG-A------GG--ATG-TA-A-----AGAGA---A-T-TT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           1814 19 -     23713 T-------A----------TTC-AA---AAG-A------GG--GAA-TC-A-------------------
i Perodicticus_ibeanus.k141_117958                      C 0 I 6
s Perodicticus_potto.k141_713187                            21111 19 -     27972 T-------A----------TTC-AA---AAG-A------GG--GAA-TC-A-------------------
i Perodicticus_potto.k141_713187                        C 0 I 6
s Perognathus_longimembris.PerPac_flattened_line_22291      39682  9 -     45160 -------------------------------------------AGA-TA-G-----AGC-----------
i Perognathus_longimembris.PerPac_flattened_line_22291  N 0 I 6
s Peromyscus_maniculatus.KI615518.1                       4946349 20 -   8017169 --------a---------atgt-ag---aag-a------tg--aaa-ta-a-----a-------------
i Peromyscus_maniculatus.KI615518.1                     C 0 I 4
s Phocoena_phocoena.PhoPho_flattened_line_11948            118272 28 -    122454 C-------A----------TGT-GG---CAG-A------GG--GAA-TA-A-----AGAGA---A-T-TG
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           1403 28 -      3310 T-------A----------TGC-AG---AAG-A------GG--GAA-CA-A-----AGAGA---A-T-TT
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       21309 28 -     82327 T-------A----------TGC-AG---AAG-A------GG--GAA-CA-A-----AGAGA---A-T-TT
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           18060 28 +     19957 T-------A----------TGC-AG---AAG-A------GG--GAA-CA-A-----AGAGA---A-T-TT
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26736069 28 +  26888534 T-------A----------TGC-AG---AAG-A------GG--GAA-CA-A-----AGaga---a-t-tt
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            93318 28 +    112873 C-------A----------TGT-GG---AAG-A------GG--GAG-TA-A-----AGCAA---G-T-TT
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        I 1 C 0
s Pithecia_albicans.k141_991845                             39915 28 -     61926 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        21344 28 +     78826 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              5295 28 -     15800 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                         8493 28 -     16101 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          1802 28 +      9673 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13470796 28 -  19735023 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                            9704 28 -     31692 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           2339 28 +     21690 C-------A----------TGT-GG---CAG-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       19096 28 +     44506 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        19314 28 +     67491 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                       9559 28 -     98129 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     19159 28 +    147771 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        19410 28 -     23762 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_2078842                         19358 28 -     19696 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Plecturocebus_dubius.k141_2078842                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         19232 28 +    152463 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      5989 28 +      8943 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                          8949 28 +    134592 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          19542 28 -     75465 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              183586 28 -    373494 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TC
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19803490 28 +  19899266 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TC
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               1639 28 -     15069 T-------A----------TGC-AG---AAG-A------GG--GAA-CA-A-----AGAGA---A-T-TT
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              1773 28 +     14865 T-------A----------TGC-AG---AAG-A------GG--GAA-CA-A-----AGAGA---A-T-TT
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                72962 29 +     78963 T-------A----------TAA-GG---AAG-A-----CAG--AGT-GA-T-----AAAAA---A-C-TT
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6844970 28 +  12164890 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGaga---a-t-tt
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     13405 28 -     30946 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAga---a-t-tt
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                            0  5 +     11805 ------------------------------------------------------------A---T-A-TT
i Propithecus_coronatus.k141_1353159                    N 0 C 0
s Propithecus_diadema.k141_577245                           39440 28 +     52369 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         31829 28 -     44753 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            13751 28 +     27322 T-------A----------TGC-AG---AAG-A------GA--GAA-TA-A-----AGAGA---A-T-TT
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       13395 28 -     53241 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAGT---A-T-TT
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         35666 28 -     48185 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           29180 28 +     77221 --------a---------atat-ag---aat-a------ta--aaa-ta-a-----ggaTA---A-G-TT
i Psammomys_obesus.NESX01026517.1                       I 2 C 0
s Pteronotus_parnellii.KE867983.1                             895 26 -     27784 C-------A----------CAT-GT---AA--A------GG--GAG-T--A-----AGAAA---A-T-TT
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        241302 28 -    344369 C-------A----------CGT-GG---AAG-A------GA--GTG-TA-G-----AGAGA---A-T-TT
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13243010 25 -  17261082 C-------A----------TGT-GG---AAG-A------GG--GTA-TA-A-----AGAga---c-----
i Pteropus_alecto.KB031157.1                            C 0 I 2
s Pteropus_vampyrus.KN525959.1                             600964 25 -   3946241 C-------A----------TGT-GG---AAG-A------GG--GTA-TA-A-----AGAga---c-----
i Pteropus_vampyrus.KN525959.1                          C 0 I 2
s Puma_concolor.QAVW01000427.1                          131530731 28 - 161321710 C-------A----------TGT-GG---AAG-A------GG--ACG-TA-A-----AGAGA---A-T-TT
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             25764 28 +     56732 T-------A----------TGC-AG---AAG-A------GG--GAA-CA-A-----AGAGA---A-T-TT
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6802254 28 +   6970761 T-------A----------TGC-AG---AAG-A------GG--GAA-CA-A-----AGAGA---A-T-TT
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             1646 28 +     18040 T-------A----------TGC-AG---AAG-A------GG--GAA-CA-A-----AGAGA---A-T-TT
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                12840 28 +     68503 C-------A----------TGT-GA---TAG-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13911128 25 +  90463843 --------G---------ATGT-AG---aag-a------ta--aaa-ca-a-----agaga---a-----
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1784610 28 +   2252614 C-------A----------TGT-GG---AAG-A------GG--AAG-TA-A-----AGaga---a-t-tt
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           12201 28 -     14454 T-------A----------TGC-AG---AAG-A------GG--GAA-CA-A-----AGAGA---A-T-TT
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206373527 28 - 206558726 T-------A----------TGC-AG---AAG-A------GG--GAA-CA-A-----AGaga---a-t-tt
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44851175 28 -  45163003 T-------A----------TGC-AG---AAG-A------GG--GAA-CA-A-----AGAGA---A-T-TT
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                16313 25 +    109198 C-------A----------TGT-GG---AAG-A------GG--GTA-TA-A-----AGAGA---C-----
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 I 2
s Saiga_tatarica.SaiTat_scaffold_82192                       4486 28 +     12214 A-------A----------TGT-GC---CAG-A------GG--GAA-TA-A-----AGAGA---A-T-TA
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15668967 28 -  43202129 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGaga---a-t-tt
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                         842 28 +     34089 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                               773 28 -     60842 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                               842 28 +     67014 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                               842 28 +     60816 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                  770 28 -     76454 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17337350 28 -  30362882 T-------G----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         16951 28 -     62485 T-------G----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   28386 28 -    114521 C-------A----------TGT-AT---TAG-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1527475                       24189 28 +     26421 T-------A----------TGC-AG---AAG-A------GG--GAA-CA-A-----AGAGA---A-T-TT
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       4651 28 +     20762 T-------A----------TGC-AG---AAG-A------GG--GAA-CA-A-----AGAGA---A-T-TT
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         38384 28 +     40653 T-------A----------TGC-AG---AAG-A------GG--GAA-CA-A-----AGAGA---A-T-TT
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                            8943 28 -     12194 T-------A----------TGC-AG---AAG-A------GG--GAA-CA-A-----AGAGA---A-T-TT
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     22362 28 -     27512 T-------A----------TGC-AG---AAG-A------GG--GAA-CA-A-----AGAGA---A-T-TT
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         31383 28 -     33692 T-------A----------TGC-AG---AAG-A------GG--GAA-CA-A-----AGAGA---A-T-TT
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   94411 28 -    120886 --------A---------ACGT-AC---AAG-A------TG--AAA-TA-A-----GGATA---A-G-TA
i Sigmodon_hispidus.SigHis_scaffold_11332               I 1 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            14608 28 +    739146 C-------A----------TGT-GG---AAG-A------AG--AAG-TA-A-----AGAGA---A-T-TT
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2236269 20 +   2842873 T-------AAT-------GTGg-aa-----g-a------aataaga-t----------------------
i Spermophilus_dauricus.KZ294190.1                      I 2 I 5
s Spilogale_gracilis.SpiGra_flattened_line_905             231014 28 -    276980 C-------A----------TGA-GG---AAG-A------GG--GTG-TA-A-----AGAGA---A-A-TT
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            23979 28 +     62062 C-------A----------TGC-AG---AAG-A------GG--ACG-TA-A-----AGAGA---A-T-TT
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189268907 28 + 218635234 c-------a----------tgt-ag---aAG-A------AG--GAA-TA-A-----GGAGA---A-T-TT
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                     13898313 28 +  13920577 T-------A----------TGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TC
i Symphalangus_syndactylus.tarseq_24                    I 9 C 0
s Tadarida_brasiliensis.TadBra_scaffold_148405               2642 28 -      6063 C-------G----------TGT-GG---TAG-A------GG--GTG-TA-A-----AGAAA---A-T-TT
i Tadarida_brasiliensis.TadBra_scaffold_148405          n 28 I 7
s Tamandua_tetradactyla.TamTet_scaffold_26877               11769 25 +     45698 T-------A----------TAC-AG---AAA-A------GG--TAA-TA-A-----AAAGA---A-----
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      803763 26 +   1148477 C-------A----------T---GG---AAG-A------GG--GAG-TA-A-----AGAGA---A-T-TT
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  54425 26 +     99546 C-------A----------T---GG---AAG-A------GG--GAG-TA-A-----AGAGA---A-T-TT
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               23101 28 +     42269 T-------A----------CTC-AG---AAG-A------AG--GAA-TA-A-----AGAGA---A-C-CT
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               56415 28 +     65473 T-------G----------CTC-AG---AAG-A------AG--GAA-TA-A-----AGAGA---A-C-CT
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194003683 28 - 194193292 T-------A----------TGC-AG---AAG-A------GG--GAA-CA-A-----AGaga---a-t-tt
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                   635 25 +      6782 T-------A----------TAT-AG---AAA-A------GG--TAG-TA-A-----AAAGA---A-----
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  132901 26 -    259118 C-------A----------TAT-GA---CA--A------GG--GAG-T--A-----AGAGA---A-T-TT
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        22761 28 +     38948 T-------A----------TGC-AG---AAG-A------GG--GAA-CA-A-----AGAGA---A-T-TT
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   16488 28 -     32910 T-------A----------TGC-AG---AAG-A------GG--GAA-CA-A-----AGAGA---A-T-TT
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       22386 28 +     24652 T-------A----------TGC-AG---AAG-A------GG--GAA-CA-A-----AGAGA---A-T-TT
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      1271 28 -      3559 T-------A----------TGC-AG---AAG-A------GG--GAA-CA-A-----AGAGA---A-T-TT
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           39210 28 -     54611 T-------A----------TGC-AG---AAG-A------GG--GAA-CA-A-----AGAGA---A-T-TT
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       15209 28 +     17312 T-------A----------TGC-AG---AAG-A------GG--GAA-CA-A-----AGAGA---A-T-TT
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    22579 28 -     25040 T-------A----------TGC-AG---AAG-A------GG--GAA-CA-A-----AGAGA---A-T-TT
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          1245 28 +      3528 T-------A----------TGC-AG---AAG-A------GG--GAA-CA-A-----AGAGA---A-T-TT
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  47607 28 +     51589 T-------A----------TGC-AG---AAG-A------GG--GAA-CA-A-----AGAGA---A-T-TT
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       10775 28 +     14732 T-------A----------TGC-AG---AAG-A------GG--GAA-CA-A-----AGAGA---A-T-TT
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       1253 28 -     28054 T-------A----------TGC-AG---AAG-A------GG--GAA-CA-A-----AGAGA---A-T-TT
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44656048 28 -  44834318 T-------A----------TGC-AG---AAG-A------GG--GAA-CA-A-----AGAGA---A-T-TT
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        1058 28 +      3372 T-------A----------TGC-AG---AAG-A------GG--GAA-CA-A-----AGAGA---A-T-TT
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   2251 26 +     90398 C-------A----------TGT-GA---CAG-A------GG--GAA-TA-A-----A--GA---A-T-TT
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16078348 19 +  31416278 A-------A----------TAT-gg---aag-a-----gag--aat-aa---------------------
i Trichechus_manatus.JH594618.1                         C 0 I 9
s Tupaia_chinensis.KB320831.1                             2787930 14 -   3938065 --------------------------------------------AA-CA-A-----AGACA---A-T-TT
i Tupaia_chinensis.KB320831.1                           I 10 C 0
s Tupaia_tana.TupTan_flattened_line_68454                     490 14 +     13056 --------------------------------------------AA-CA-A-----AGACA---A-T-TT
i Tupaia_tana.TupTan_flattened_line_68454               I 10 C 0
s Tursiops_truncatus.MRVK01000923.1                      69310373 28 -  96451834 C-------A----------TGT-GG---CGG-A------GG--GAA-TA-A-----AGAGA---A-T-TG
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 23573 26 -     25548 T-------AT---------TGT-AG---AAA-A------TG--AAG-TA-A-----AGAGA---C-----
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 I 2
s Ursus_maritimus.KK498671.1                              6511000 28 +  28682327 C-------A----------TGT-GG---AAG-A------GG--GTG-TA-A-----GGAGA---A-T-TT
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  1913 28 -     20643 T-------A----------CGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             21458 28 -     33872 T-------A----------CGC-AG---AAG-A------GG--GAA-TA-A-----AGAGA---A-T-TT
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1521692 28 -   2331223 C-------A----------TGT-GG---GAG-A------GG--GAA-TA-C-----AGAGA---A-T-TT
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                134154 26 -    281493 C-------A----------TGT-GG---AAG-A------GG--GTG-TA-A-----AGAGA---A-T---
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       123468 18 -    134049 C-------AGT-------ATGA-AA-----G-A------AG--AAA-T----------------------
i Xerus_inauris.XerIna_scaffold_7898                    I 2 I 5
s Zalophus_californianus.ZalCal_flattened_line_4097        210678 28 -    227762 C-------A----------TGT-GG---AAG-A------GG--GTG-TA-G-----AGAGA---A-T-TT
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           3876 28 -      8775 C-------A----------CGT-GG---CAG-A------GG--GAA-TG-A-----AGAGA---A-T-TT
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Megaderma_lyra.MegLyr_scaffold_3562                       61508  0 -    234502 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16291  1 -    119109 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     12283  2 -     20485 I
e Jaculus_jaculus.JH725517.1                              8561873  2 +  11848649 I
e Hylobates_pileatus_b.LG03                                     92553610  0 - 189753342 C
e Allactaga_bullata.AllBul_scaffold_70162                    8911  2 -     22067 I
e Nannospalax_galili.KL201303.1                            107431  0 +    362372 C
e Dolichotis_patagonum.DolPat_scaffold_14102                33375  0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             56104 16 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                14631 16 +     26546 I
e Cricetulus_griseus.LT883672.1                          53025429  0 +  72327488 C
e Cavia_tschudii.CavTsc_scaffold_488                       173989  0 +    436027 C
e Cavia_porcellus.DS562889.1                             15795798  0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15783848 16 -  24422027 I
e Arctocebus_calabarensis.k141_1161114                      14526 30 +     17483 I

a score=0.000000
s hg38.chr4_GL000008v2_random                                8326 4 +    209709 T--CT-A
s Acinonyx_jubatus.LLWD01000356.1                         2030419 4 +   3721120 t--ca-a
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    108683 5 -    189883 T--TTAA
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 3 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10653753 4 +  23371972 T--CT-A
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7090255 4 -  16596857 T--Cc-a
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allenopithecus_nigroviridis.k141_3103707                  59349 4 +     61638 T--CT-A
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        51157 4 +     53391 T--CT-A
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         1881 4 +     72529 T--CT-A
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          1457 4 +      3797 T--CT-A
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             6550 4 -     18050 T--CT-A
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  7667 4 -     11521 T--CT-A
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              7225 4 -     21359 T--CT-A
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1856473                                5608 4 +      7227 T--CT-A
i Alouatta_juara.k141_1856473                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          6522 4 -     10438 T--CT-A
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            3177 4 +      7047 T--CT-A
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             6461 4 +     10410 T--CT-A
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1374428                             264 4 -     25526 T--CT-A
i Alouatta_puruensis.k141_1374428                       C 0 C 0
s Alouatta_seniculus.k141_990213                             3182 4 +      6429 T--CT-A
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3516914 4 +   4113121 T--CT-A
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      387374 4 -    631301 T--CT-A
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            27822 4 +     33004 T--CT-A
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 58856 4 +     78111 T--CT-A
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            1787 4 +     22701 T--CT-A
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5745747 4 +   9889416 t--ct-a
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             2339 4 -    104377 T--CT-A
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               2339 4 +     23246 T--CT-A
i Aotus_vociferans.k141_718647                          C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 5473 4 -     29036 T--CT-A
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9535600 4 +  39197703 T--CT-A
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             56888 4 +     85812 T--CT-A
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 7885 4 +     89302 T--CT-A
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             12394 4 -     58268 T--CT-A
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             60382 4 +    119057 T--CT-A
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               2332 4 -     25888 T--CT-A
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 3188 4 -     16375 T--AT-A
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_767228                               9160 4 -      9688 T--AT-A
i Avahi_peyrierasi.k141_767228                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26377126 4 +  51448160 T--CT-A
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        2357 4 -     13118 T--CT-A
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   40014 4 -     72089 T--CT-A
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6556436 4 +   6870073 T--CT-A
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138136667 4 - 161108492 T--CT-A
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     569045 4 -    998990 T--CT-A
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136292400 4 - 158972876 T--CT-A
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1228021 4 -   1914593 T--CT-A
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               110230 4 -    171031 T--CT-A
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                  9256 4 +    125063 T--CT-A
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                11304 4 -    216513 T--CT-A
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        3843 4 -    134917 T--CT-A
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3216158 4 -   8989139 T--CT-A
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           394342 4 -  15254737 T--CT-A
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2970079 4 +   6889770 T--CT-A
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11515140 1 +  39901454 ------A
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   10157 1 +     87036 ------A
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11261799 1 -  35597290 ------A
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11084328 1 +  39895921 ------A
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16451362 1 -  44759192 ------A
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21322021 4 + 157394656 T--CT-A
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135703248 4 - 157403528 T--CT-A
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_647363                   863 3 +      1887 T---C-A
i Capromys_pilorides.CapPil_scaffold_647363             I 16 I 152
s Carlito_syrichta.NW_007248099.1                          305639 4 +    345090 T--CT-A
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               56551 4 +     67245 T--CT-A
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   155872 4 -    276539 T--CT-A
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18887069 4 -  29618158 T--CT-A
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 4615 4 -     26817 T--CT-A
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                 8855 4 +     25043 T--CT-A
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         4688 4 +     21754 T--CT-A
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4360338 4 +   7569818 T--CT-A
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_520758          340 4 -       446 T--CT-A
i Ceratotherium_simum_cottoni.CerCot_scaffold_520758    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6551145 4 +   6739814 t--cc-a
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      52622 4 -     54931 T--CT-A
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         17606 4 -     19697 T--CT-A
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         55137 4 -    107033 T--CT-A
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        1580 4 -      3853 T--CT-A
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          25512 4 +     30494 T--CT-A
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           1535 4 -      4022 T--CT-A
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          1427 4 -      3505 T--CT-A
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           20233 4 +     35983 T--CT-A
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11986755 4 +  12117833 T--CT-A
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46473508 4 +  46592721 T--CT-A
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      31335 4 +     33420 T--CT-A
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        1371 4 -      3443 T--CT-A
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      2362 4 -      4669 T--CT-A
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        2163 4 -      4411 T--CT-A
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         1686 4 -      4205 T--CT-A
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           55524 4 -     68416 T--AT-A
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            4573 4 +     13308 T--AT-A
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             1868 4 -     18223 T--CT-A
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             18891 4 +     25473 T--CT-A
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           37930 4 +     57117 T--CT-A
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          42605 4 +     54541 T--CT-A
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15958015 3 +  43084221 t---g-c
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         67451 4 +    196370 T--CT-A
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          11625 4 +     40510 T--CT-A
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15134966 4 -  15256731 T--CT-A
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      30012 4 -     53260 T--CT-A
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101140460 4 + 101219884 t--ct-a
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10879042 4 +  10971483 t--ct-a
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147660201 4 + 156195979 T--CT-A
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            12186 4 +     23629 T--CT-A
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60609818 4 +  78930452 T--CT-A
i Condylura_cristata.JH655880.1                         I 8 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         36257 4 -     40477 T--CT-C
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     I 8 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 274126 4 -    399297 T--CT-A
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             15767 2 -     19186 ----T-A
i Crocidura_indochinensis.CroInd_scaffold_38409         I 1 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            48446 4 -     70449 T--CT-A
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  204850 4 -    956709 T--CT-A
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 27023 3 -     67205 t---c-a
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 I 118
s Daubentonia_madagascariensis.ctg11                     16841398 4 +  31942871 T--AT-A
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80033865 4 -  96802777 T--CT-A
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18695861 4 -  18957592 t--ct-a
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 318995 4 +    993696 T--CT-A
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_170113                  258 4 +       818 T--CT-A
i Diceros_bicornis.DicBicMic_scaffold_170113            C 0 C 0
s Dipodomys_ordii.KN672545.1                              3652155 4 +   4240102 a--at-a
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 23709 4 +     28912 A--AT-A
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Echinops_telfairi.JH980316.1                           22991135 4 -  44670279 G--GT-A
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                  9244 4 +     24177 t--ct-a
i Eidolon_helvum.KE772537.1                             I 2 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1488559 4 +   1727528 T--CT-A
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7803285 4 +  15467074 t--tt-a
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        235772 4 -    369425 t--cc-a
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           2780 4 -      7838 c--ct-a
i Ellobius_talpinus.LOJH01090055.1                      I 10 C 0
s Enhydra_lutris.KZ291749.1                              85867062 4 +  99434291 C--CT-A
i Enhydra_lutris.KZ291749.1                             I 10 C 0
s Equus_asinus.JREZ01000137.1                             2952254 4 -   4388051 c--ct-a
i Equus_asinus.JREZ01000137.1                           I 9 C 0
s Equus_caballus.CM000402.2                              13346265 4 +  41866177 C--CT-A
i Equus_caballus.CM000402.2                             I 9 C 0
s Equus_przewalskii.ATBW01073585.1                           8257 4 +     92910 C--CT-A
i Equus_przewalskii.ATBW01073585.1                      I 9 C 0
s Erythrocebus_patas.Contig8                             48767145 4 -  48907691 T--CT-A
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          312010 4 +    330699 T--CT-C
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             58439 4 +     89355 T--CT-A
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              1594 4 +     13586 T--AT-A
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               1531 4 -      6809 T--AT-A
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             8002 4 +     36558 T--AT-A
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             4319 4 +     60246 T--AT-A
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 7807 4 +    109717 T--AT-A
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               12181 4 +     16540 T--AT-A
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                12458 4 +     27497 T--AT-A
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           14914 4 +     26808 T--AT-A
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                29647 4 +     46535 T--AT-A
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              12370 4 -     29447 T--AT-A
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129889399 4 - 159252932 t--ca-a
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129276473 4 - 158578461 T--ca-a
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 17608 4 +     52776 T--CA-A
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13889599 3 -  19261668 a---t-a
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     207543 4 -    847004 T--AT-A
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                            9923 4 -     43889 T--AT-A
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           6972 4 +     27357 T--AT-A
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               152857 4 +    324696 T--CT-A
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    178072 4 -    189561 T--CT-A
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                            9264 6 -     18683 TTTTT-A
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               1719 4 -     14630 T--CT-A
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119648817 4 - 195582420 T--CT-A
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   73823 4 +    118900 T--TT-A
i Graphiurus_murinus.GraMur_scaffold_4493               I 8 C 0
s Hapalemur_alaotrensis.k141_1198205                         2142 4 +      3980 T--AC-A
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             24622 4 +     26611 T--AC-A
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             2076 4 +     56096 T--AC-A
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        25349 4 -     42470 T--AC-A
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        41946 4 -     54384 T--AC-A
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              13650 4 +     53719 T--CT-A
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                24426 4 -     91191 T--CT-A
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2547710 3 +  31725842 g---t-a
i Heterocephalus_glaber.JH602058.1                      I 16 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               53127 4 +     73687 T--CT-A
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              144135 4 +    277961 T--CC-A
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      275555 4 -    477199 t--ct-a
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              4709 4 -      9143 T--CT-A
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg649                                    98391 4 +    115816 T--CT-A
i Hoolock_leuconedys.ctg649                                C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 12718 4 -     67322 C--CT-A
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hylobates_abbotti.k141_493872                              1528 4 +      5897 T--CT-A
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_282275                                741 4 +      1846 T--CT-A
i Hylobates_agilis.k141_282275                          C 0 C 0
s Hylobates_klossii.k141_466549                              7986 4 +     11537 T--CT-A
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_muelleri.k141_1133650                             963 4 -      2775 T--CT-A
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             29565 4 -     60944 T--CT-A
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     2679 4 +     22540 T--GT-A
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7122368 4 +  13083262 t--tt-a
i Ictidomys_tridecemlineatus.JH393315.1                 I 5 C 0
s Indri_indri.k141_3334527                                   8586 4 +      9207 T--AT-G
i Indri_indri.k141_3334527                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               5792 4 +     17520 T--CT-A
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               20624 4 +     37189 T--CT-A
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          46443 4 -    147782 T--CT-G
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   110739 4 -    115756 T--AT-A
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258403625 4 - 285822530 T--AC-A
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        20519 4 +     39228 T--AT-A
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            49895 4 +     63517 T--TT-A
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        75115 4 +    116806 T--TT-A
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     28156 4 -     33031 T--AT-A
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3082421 4 -   3498232 T--CT-A
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lipotes_vexillifer.KE558548.1                            132967 4 +   3060487 T--CT-A
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19244231 4 +  19376315 T--CT-A
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            7272 4 +     84689 T--AT-A
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3775023 4 +   6799190 T--AT-A
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20587701 4 -  62548349 t--at-a
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11083784 1 +  39895028 ------A
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             15917 4 +     74745 T--CT-A
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12702423 4 +  12821369 T--CT-A
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               4516 4 +      6569 T--CT-A
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           42816 4 +     63263 T--CT-A
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_1068107                               11393 4 +     12679 T--CT-A
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                 966 4 +      3017 T--CT-A
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  42578 4 -     79256 T--CT-A
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196031498 4 + 196197964 t--ct-a
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11441602 4 +  11645122 t--ct-a
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   1528 4 -     46448 T--CT-A
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                1355 4 -      3617 T--CT-A
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 11688 4 -     55006 T--CT-A
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43836727 4 +  43892939 T--CT-A
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                3950 4 -      5978 T--CT-A
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               1530 4 -     27140 T--CT-A
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43433391 4 -  43563597 T--CT-A
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4446217 4 -   4543643 T--CT-A
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            143034 4 +    252755 T--CT-A
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             33098 4 +     58827 T--CT-A
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36870215 4 +  64221397 t--tt-a
i Marmota_marmota.CZRN01000005.1                        I 5 C 0
s Mellivora_capensis.MelCap_flattened_line_1828            224619 4 -    226874 C--CC-A
i Mellivora_capensis.MelCap_flattened_line_1828         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233                8148 4 +     15977 T---TGA
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1043038 4 -  26018355 t--CT-A
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_183284                    663 4 +      2166 T--CT-A
i Mesoplodon_bidens.MesBid_scaffold_183284              C 0 C 0
s Microcebus_murinus.CM007691.1                          16506740 4 +  47401472 t--at-a
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  28077 4 -     48017 G--GT-A
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               19710 4 -     32043 T--CT-A
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22815427 4 -  98408828 t--CT-A
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        32065 4 +     34273 T--CT-A
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         7719 4 -    104932 T--CT-A
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     2154 4 +      8497 T--AT-A
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 143390 4 +    154973 T--CT-A
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                158030 4 +    265003 T--CT-A
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 1657 4 -      4346 T--CT-A
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  141340 4 -    168139 T--CT-A
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          16247 4 -    100666 T--CT-A
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70761615 2 +  92629107 ----t-a
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75484910 2 +  98207768 ----T-A
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67549226 2 +  89017189 ----T-C
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74324329 2 +  97876770 ----T-A
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              7777 4 +     98495 T--TT-A
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 657 C 0
s Mustela_putorius.JH417978.1                             4419472 4 -  28371801 C--CT-A
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     86599 3 -    117718 T---C-A
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 14 I 152
s Myotis_brandtii.KE161952.1                               964574 4 +   8389877 t--ct-a
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5016251 4 +   6462685 t--ct-a
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3462160 4 -   3747815 t--ct-a
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         7357 4 +     66751 T--CT-A
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Nasalis_larvatus.k141_153429                               4430 4 +     48152 T--CT-A
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4481320 4 -  14209539 T--CT-A
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3947999 4 -   4490290 T--CT-A
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  46361 4 +     94413 T--CT-A
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1223136                          10197 4 -     11253 T--CT-A
i Nomascus_annamensis.k141_1223136                      C 0 C 0
s Nomascus_concolor.k141_468488                               840 4 -      1482 T--CT-A
i Nomascus_concolor.k141_468488                         I 28 C 0
s Nomascus_gabriellae.k141_906566                             829 4 -      2544 T--CT-A
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             21303 4 -  18771707 T--CT-A
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_844529                                   578 4 +      2124 T--CT-A
i Nomascus_siki_a.k141_844529                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                26780 1 +   3668941 ------A
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65563602 4 -  95554990 T--AT-A
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                             447 4 +      6470 T--AT-A
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65665971 4 +  89412551 T--AT-A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Octodon_degus.JH651621.1                                3675157 3 +  10294119 t---t-c
i Octodon_degus.JH651621.1                              C 0 I 327
s Odobenus_rosmarus.KB229369.1                             675978 4 -   3126709 T--CT-A
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1076782 4 +   1425656 T--CT-a
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         33944 4 +     78940 T--CT-A
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  121250 4 +    145789 T--CT-A
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  33201 4 +     62360 T--CT-A
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7221683 4 -   7562323 T--CT-A
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              39936 4 -     66828 T--CC-A
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      304115 1 -    505867 ------a
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       35611 4 +     38679 T--AT-A
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18005052 4 -  38779656 T--AT-A
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134074228 4 - 275406953 T--CT-A
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      75442 4 +    140051 T--CT-A
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127571061 4 - 205426864 T--CT-A
i Pan_paniscus.CM003386.1                               I 37 I 1
s Pan_troglodytes.CM009241.2                            120148208 4 - 196562556 T--CT-A
i Pan_troglodytes.CM009241.2                            I 37 I 1
s Panthera_onca.PanOnc_flattened_line_1615                  30562 4 +    295523 T--CA-A
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3634166 4 +  18214204 t--ca-a
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5023943 4 -   6340057 t--ca-a
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1062943 4 -   1292953 T--CT-A
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188152176 4 - 188283584 t--ct-a
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            48388 4 +     76494 T--CT-A
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47509572 4 +  47705337 T--CT-A
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 63555 4 -    104429 T--CT-A
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  13339 4 -     29451 T--CT-A
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                33744 4 +     35859 T--CT-A
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    111894 4 -    135482 T--CT-A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           1839 4 -     23713 T--AT-A
i Perodicticus_ibeanus.k141_117958                      I 6 C 0
s Perodicticus_potto.k141_713187                            21136 4 -     27972 T--AT-A
i Perodicticus_potto.k141_713187                        I 6 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      39697 4 -     45160 A--AT-A
i Perognathus_longimembris.PerPac_flattened_line_22291  I 6 C 0
s Peromyscus_maniculatus.KI615518.1                       4946373 4 -   8017169 T--CT-A
i Peromyscus_maniculatus.KI615518.1                     I 4 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            118300 4 -    122454 T--CT-A
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           1431 4 -      3310 T--CT-A
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       21337 4 -     82327 T--CT-A
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           18088 4 +     19957 T--CT-A
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26736097 4 +  26888534 t--ct-a
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            93346 4 +    112873 T--CT-A
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             39943 4 -     61926 T--CT-A
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        21372 4 +     78826 T--CT-A
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              5323 4 -     15800 T--CT-A
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                         8521 4 -     16101 T--CT-A
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          1830 4 +      9673 T--CT-A
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13470824 4 -  19735023 T--CT-A
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                            9732 4 -     31692 T--CT-A
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           2367 4 +     21690 T--CT-A
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       19124 4 +     44506 T--CT-A
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        19342 4 +     67491 T--CT-A
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                       9587 4 -     98129 T--CT-A
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     19187 4 +    147771 T--CT-A
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        19438 4 -     23762 T--CT-A
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_2078842                         19386 4 -     19696 T--CT-A
i Plecturocebus_dubius.k141_2078842                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         19260 4 +    152463 T--CT-A
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      6017 4 +      8943 T--CT-A
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                          8977 4 +    134592 T--CT-A
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          19570 4 -     75465 T--CT-A
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              183614 4 -    373494 T--CT-A
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19803518 4 +  19899266 T--CT-A
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               1667 4 -     15069 T--CT-A
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              1801 4 +     14865 T--CT-A
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                72991 4 +     78963 T--CT-A
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6844998 4 +  12164890 t--ac-a
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     13433 4 -     30946 t--at-a
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                            5 4 +     11805 T--TT-A
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           39468 4 +     52369 T--AT-A
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         31857 4 -     44753 T--AT-A
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            13779 4 +     27322 T--AT-A
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       13423 4 -     53241 T--AT-A
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         35694 4 -     48185 T--AT-A
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           29208 5 +     77221 T--TTGA
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                             921 4 -     27784 c--ct-a
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        241330 4 -    344369 C--CT-A
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13243037 4 -  17261082 t--ct-a
i Pteropus_alecto.KB031157.1                            I 2 C 0
s Pteropus_vampyrus.KN525959.1                             600991 4 -   3946241 t--ct-a
i Pteropus_vampyrus.KN525959.1                          I 2 C 0
s Puma_concolor.QAVW01000427.1                          131530759 4 - 161321710 T--ca-a
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             25792 4 +     56732 T--CT-A
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6802282 4 +   6970761 T--CT-A
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             1674 4 +     18040 T--CT-A
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                12868 4 +     68503 T--CT-A
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13911153 2 +  90463843 ----t-a
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1784638 4 +   2252614 t--ct-a
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           12229 4 -     14454 T--CT-A
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206373555 4 - 206558726 t--ct-a
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44851203 4 -  45163003 T--CT-A
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                16340 4 +    109198 T--CT-A
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            I 2 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       4514 4 +     12214 T--CT-A
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15668995 4 -  43202129 t--ct-a
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                         870 4 +     34089 T--CT-A
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                               801 4 -     60842 T--CT-A
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                               870 4 +     67014 T--CT-A
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                               870 4 +     60816 T--CT-A
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                  798 4 -     76454 T--CT-A
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17337378 4 -  30362882 T--CT-A
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         16979 4 -     62485 T--CT-A
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   28414 4 -    114521 T--CC-A
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1527475                       24217 4 +     26421 T--CT-A
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       4679 4 +     20762 T--CT-A
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         38412 4 +     40653 T--CT-A
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                            8971 4 -     12194 T--CT-A
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     22390 4 -     27512 T--CT-A
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         31411 4 -     33692 T--CT-A
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   94439 4 -    120886 T--CT-A
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            14636 4 +    739146 T--CT-A
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2236294 4 +   2842873 t--tt-a
i Spermophilus_dauricus.KZ294190.1                      I 5 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             231042 4 -    276980 T--CT-A
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            24007 4 +     62062 T--CT-A
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189268935 4 + 218635234 T--CT-A
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                     13898341 4 +  13920577 T--CT-A
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               2851 4 -      6213 T--CT-A
i Tadarida_brasiliensis.TadBra_scaffold_145589          I 28 C 0
s Tapirus_indicus.TapInd_scaffold_176                      803789 4 +   1148477 T--CT-A
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  54451 4 +     99546 T--CT-A
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               23129 4 +     42269 T--CT-G
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               56443 4 +     65473 T--CT-A
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194003711 4 - 194193292 t--ct-a
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  132927 4 -    259118 T--CT-A
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        22789 4 +     38948 T--CT-A
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   16516 4 -     32910 T--CT-A
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       22414 4 +     24652 T--CT-A
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      1299 4 -      3559 T--CT-A
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           39238 4 -     54611 T--CT-A
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       15237 4 +     17312 T--CT-A
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    22607 4 -     25040 T--CT-A
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          1273 4 +      3528 T--CT-A
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  47635 4 +     51589 T--CT-A
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       10803 4 +     14732 T--CT-A
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       1281 4 -     28054 T--CT-A
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44656076 4 -  44834318 T--CT-A
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        1086 4 +      3372 T--CT-A
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   2277 4 +     90398 T--CT-A
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16078376 4 +  31416278 t--ct-a
i Trichechus_manatus.JH594618.1                         I 9 C 0
s Tupaia_chinensis.KB320831.1                             2787944 4 -   3938065 T--CT-A
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                     504 4 +     13056 T--CT-A
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69310401 4 -  96451834 T--CT-A
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 23601 4 -     25548 T--CT-A
i Uropsilus_gracilis.UroGra_scaffold_4143_0             I 2 C 0
s Ursus_maritimus.KK498671.1                              6511028 4 +  28682327 T--CT-A
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  1941 4 -     20643 G--AT-A
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             21486 4 -     33872 G--AT-A
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1521720 4 -   2331223 T--CT-A
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                134180 1 -    281493 ------A
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       123491 4 -    134049 T--CT-A
i Xerus_inauris.XerIna_scaffold_7898                    I 5 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        210706 4 -    227762 T--CT-A
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           3904 4 -      8775 T--CT-A
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_141308              5625 53 -     12508 M
e Tolypeutes_matacus.TolMat_scaffold_269431                   660 0 +      6782 C
e Tamandua_tetradactyla.TamTet_scaffold_26877               11794 0 +     45698 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             2116 0 -      8794 C
e Miniopterus_schreibersii.MinSch_scaffold_24116            31119 0 +     45743 C
e Miniopterus_natalensis.LDJU01000022.1                   8206438 0 +  10048721 C
e Megaderma_lyra.MegLyr_scaffold_3562                       61508 0 -    234502 C
e Dasypus_novemcinctus.JH568778.1                          178731 0 -   6883506 C
e Choloepus_hoffmanni.KN194586.1                           758862 0 +    964067 C
e Choloepus_didactylus.ChoDid_scaffold_36182                13556 0 -     21363 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16291 1 -    119109 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     12283 2 -     20485 I
e Jaculus_jaculus.JH725517.1                              8561873 2 +  11848649 I
e Hylobates_pileatus_b.LG03                                     92553610 0 - 189753342 C
e Allactaga_bullata.AllBul_scaffold_70162                    8911 2 -     22067 I
e Nannospalax_galili.KL201303.1                            107431 0 +    362372 C
e Dolichotis_patagonum.DolPat_scaffold_14102                33375 0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             56104 16 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                14631 16 +     26546 I
e Cricetulus_griseus.LT883672.1                          53025429 0 +  72327488 C
e Cavia_tschudii.CavTsc_scaffold_488                       173989 0 +    436027 C
e Cavia_porcellus.DS562889.1                             15795798 0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15783848 16 -  24422027 I
e Castor_canadensis.CasCan_scaffold_47037                   27073 4 +     33760 I
e Arctocebus_calabarensis.k141_1161114                      14526 30 +     17483 I

a score=0.000000
s hg38.chr4_GL000008v2_random                                8330 1 +    209709 A
s Acinonyx_jubatus.LLWD01000356.1                         2030423 1 +   3721120 a
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    108688 1 -    189883 A
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10653757 1 +  23371972 A
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7090259 1 -  16596857 a
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allenopithecus_nigroviridis.k141_3103707                  59353 1 +     61638 A
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        51161 1 +     53391 A
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         1885 1 +     72529 A
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          1461 1 +      3797 A
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             6554 1 -     18050 A
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  7671 1 -     11521 A
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              7229 1 -     21359 A
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1856473                                5612 1 +      7227 A
i Alouatta_juara.k141_1856473                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          6526 1 -     10438 A
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            3181 1 +      7047 A
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             6465 1 +     10410 A
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1374428                             268 1 -     25526 A
i Alouatta_puruensis.k141_1374428                       C 0 C 0
s Alouatta_seniculus.k141_990213                             3186 1 +      6429 A
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3516918 1 +   4113121 A
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      387378 1 -    631301 A
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            27826 1 +     33004 A
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 58860 1 +     78111 A
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            1791 1 +     22701 A
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5745751 1 +   9889416 a
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             2343 1 -    104377 A
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               2343 1 +     23246 A
i Aotus_vociferans.k141_718647                          C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 5477 1 -     29036 A
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9535604 1 +  39197703 A
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             56892 1 +     85812 A
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 7889 1 +     89302 A
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             12398 1 -     58268 A
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             60386 1 +    119057 A
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               2336 1 -     25888 A
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 3192 1 -     16375 A
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_767228                               9164 1 -      9688 A
i Avahi_peyrierasi.k141_767228                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26377130 1 +  51448160 A
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        2361 1 -     13118 A
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   40018 1 -     72089 A
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6556440 1 +   6870073 A
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138136671 1 - 161108492 A
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     569049 1 -    998990 A
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136292404 1 - 158972876 A
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1228025 1 -   1914593 A
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               110234 1 -    171031 A
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                  9260 1 +    125063 A
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                11308 1 -    216513 A
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        3847 1 -    134917 A
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3216162 1 -   8989139 A
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           394346 1 -  15254737 A
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2970083 1 +   6889770 A
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11515141 1 +  39901454 A
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   10158 1 +     87036 A
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11261800 1 -  35597290 A
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11084329 1 +  39895921 A
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16451363 1 -  44759192 A
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21322025 1 + 157394656 A
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135703252 1 - 157403528 A
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_647363                  1018 1 +      1887 a
i Capromys_pilorides.CapPil_scaffold_647363             I 152 C 0
s Carlito_syrichta.NW_007248099.1                          305643 1 +    345090 A
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               56555 1 +     67245 A
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   155876 1 -    276539 A
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18887073 1 -  29618158 A
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 4619 1 -     26817 A
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                 8859 1 +     25043 A
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         4692 1 +     21754 A
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4360342 1 +   7569818 A
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_520758          344 1 -       446 A
i Ceratotherium_simum_cottoni.CerCot_scaffold_520758    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6551149 1 +   6739814 a
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      52626 1 -     54931 A
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         17610 1 -     19697 A
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         55141 1 -    107033 A
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        1584 1 -      3853 A
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          25516 1 +     30494 A
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           1539 1 -      4022 A
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          1431 1 -      3505 A
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           20237 1 +     35983 A
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11986759 1 +  12117833 A
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46473512 1 +  46592721 A
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      31339 1 +     33420 A
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        1375 1 -      3443 A
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      2366 1 -      4669 A
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        2167 1 -      4411 A
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         1690 1 -      4205 A
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           55528 1 -     68416 A
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            4577 1 +     13308 A
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             1872 1 -     18223 A
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             18895 1 +     25473 A
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           37934 1 +     57117 A
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          42609 1 +     54541 A
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15958018 1 +  43084221 a
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         67455 1 +    196370 A
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          11629 1 +     40510 A
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15134970 1 -  15256731 A
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      30016 1 -     53260 A
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101140464 1 + 101219884 a
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10879046 1 +  10971483 a
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147660205 1 + 156195979 A
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            12190 1 +     23629 A
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60609822 1 +  78930452 G
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         36261 1 -     40477 A
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 274130 1 -    399297 A
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             15769 1 -     19186 A
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 I 6
s Cryptoprocta_ferox.CryFer_flattened_line_19014            48450 1 -     70449 A
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  204854 1 -    956709 A
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16841402 1 +  31942871 A
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80033869 1 -  96802777 G
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18695865 1 -  18957592 a
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 318999 1 +    993696 A
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_170113                  262 1 +       818 A
i Diceros_bicornis.DicBicMic_scaffold_170113            C 0 C 0
s Dipodomys_ordii.KN672545.1                              3652159 1 +   4240102 a
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 23713 1 +     28912 A
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Echinops_telfairi.JH980316.1                           22991139 1 -  44670279 C
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                  9248 1 +     24177 a
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1488563 1 +   1727528 A
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7803289 1 +  15467074 a
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        235776 1 -    369425 a
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           2784 1 -      7838 a
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85867066 1 +  99434291 A
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Equus_asinus.JREZ01000137.1                             2952258 1 -   4388051 a
i Equus_asinus.JREZ01000137.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13346269 1 +  41866177 A
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                           8261 1 +     92910 A
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erythrocebus_patas.Contig8                             48767149 1 -  48907691 A
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          312014 1 +    330699 A
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             58443 1 +     89355 A
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              1598 1 +     13586 A
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               1535 1 -      6809 A
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             8006 1 +     36558 A
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             4323 1 +     60246 A
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 7811 1 +    109717 A
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               12185 1 +     16540 A
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                12462 1 +     27497 A
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           14918 1 +     26808 A
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                29651 1 +     46535 A
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              12374 1 -     29447 A
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129889403 1 - 159252932 a
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129276477 1 - 158578461 a
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 17612 1 +     52776 A
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13889602 1 -  19261668 a
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     207547 1 -    847004 A
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                            9927 1 -     43889 A
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           6976 1 +     27357 A
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               152861 1 +    324696 A
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    178076 1 -    189561 C
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                            9270 1 -     18683 A
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               1723 1 -     14630 C
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119648821 1 - 195582420 C
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   73827 1 +    118900 A
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                         2146 1 +      3980 A
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             24626 1 +     26611 A
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             2080 1 +     56096 A
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        25353 1 -     42470 A
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        41950 1 -     54384 A
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              13654 1 +     53719 A
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                24430 1 -     91191 A
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2547713 1 +  31725842 a
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               53131 1 +     73687 A
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              144139 1 +    277961 A
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      275559 1 -    477199 a
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              4713 1 -      9143 A
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg649                                    98395 1 +    115816 A
i Hoolock_leuconedys.ctg649                                C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 12722 1 -     67322 A
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hylobates_abbotti.k141_493872                              1532 1 +      5897 A
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_282275                                745 1 +      1846 A
i Hylobates_agilis.k141_282275                          C 0 C 0
s Hylobates_klossii.k141_466549                              7990 1 +     11537 A
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_muelleri.k141_1133650                             967 1 -      2775 A
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             29569 1 -     60944 A
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     2683 1 +     22540 A
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7122372 1 +  13083262 g
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_3334527                                   8590 1 +      9207 A
i Indri_indri.k141_3334527                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               5796 1 +     17520 G
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               20628 1 +     37189 A
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          46447 1 -    147782 A
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   110743 1 -    115756 A
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258403629 1 - 285822530 A
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        20523 1 +     39228 A
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            49899 1 +     63517 A
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        75119 1 +    116806 A
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     28160 1 -     33031 A
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3082425 1 -   3498232 A
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lipotes_vexillifer.KE558548.1                            132971 1 +   3060487 G
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19244235 1 +  19376315 A
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            7276 1 +     84689 A
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3775027 1 +   6799190 A
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20587705 1 -  62548349 a
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11083785 1 +  39895028 A
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             15921 1 +     74745 A
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12702427 1 +  12821369 A
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               4520 1 +      6569 A
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           42820 1 +     63263 A
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_1068107                               11397 1 +     12679 A
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                 970 1 +      3017 A
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  42582 1 -     79256 A
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196031502 1 + 196197964 a
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11441606 1 +  11645122 a
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   1532 1 -     46448 A
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                1359 1 -      3617 A
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 11692 1 -     55006 A
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43836731 1 +  43892939 A
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                3954 1 -      5978 A
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               1534 1 -     27140 A
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43433395 1 -  43563597 A
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4446221 1 -   4543643 A
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            143038 1 +    252755 A
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             33102 1 +     58827 A
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36870219 1 +  64221397 a
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_1828            224623 1 -    226874 A
i Mellivora_capensis.MelCap_flattened_line_1828         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233                8152 1 +     15977 A
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1043042 1 -  26018355 A
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_183284                    667 1 +      2166 G
i Mesoplodon_bidens.MesBid_scaffold_183284              C 0 C 0
s Microcebus_murinus.CM007691.1                          16506744 1 +  47401472 a
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  28081 1 -     48017 C
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               19714 1 -     32043 A
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22815431 1 -  98408828 A
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        32069 1 +     34273 A
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         7723 1 -    104932 A
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     2158 1 +      8497 A
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 143394 1 +    154973 G
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                158034 1 +    265003 A
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 1661 1 -      4346 A
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  141344 1 -    168139 A
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          16251 1 -    100666 A
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70761617 1 +  92629107 a
i Mus_caroli.LT608236.1                                 C 0 I 173
s Mus_musculus.chr16                                     75484912 1 +  98207768 A
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67549228 1 +  89017189 G
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74324331 1 +  97876770 A
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              7781 1 +     98495 G
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4419476 1 -  28371801 A
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     86754 1 -    117718 a
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 152 I 2
s Myotis_brandtii.KE161952.1                               964578 1 +   8389877 a
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5016255 1 +   6462685 a
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3462164 1 -   3747815 a
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         7361 1 +     66751 A
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Nasalis_larvatus.k141_153429                               4434 1 +     48152 A
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4481324 1 -  14209539 A
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3948003 1 -   4490290 G
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Nomascus_annamensis.k141_1223136                          10201 1 -     11253 A
i Nomascus_annamensis.k141_1223136                      C 0 C 0
s Nomascus_concolor.k141_468488                               844 1 -      1482 A
i Nomascus_concolor.k141_468488                         C 0 I 1
s Nomascus_gabriellae.k141_906566                             833 1 -      2544 A
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             21307 1 -  18771707 A
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_844529                                   582 1 +      2124 A
i Nomascus_siki_a.k141_844529                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                26781 1 +   3668941 A
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65563606 1 -  95554990 A
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                             451 1 +      6470 A
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65665975 1 +  89412551 A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Odobenus_rosmarus.KB229369.1                             675982 1 -   3126709 A
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1076786 1 +   1425656 a
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         33948 1 +     78940 C
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  121254 1 +    145789 A
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  33205 1 +     62360 G
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7221687 1 -   7562323 G
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              39940 1 -     66828 A
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      304116 1 -    505867 a
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       35615 1 +     38679 A
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18005056 1 -  38779656 A
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134074232 1 - 275406953 A
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      75446 1 +    140051 A
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.AJFE02005303.1                                1092 1 +      1263 A
i Pan_paniscus.AJFE02005303.1                           I 169 n 1
s Pan_troglodytes.NBAG03003562.1                             9533 1 +     18198 A
i Pan_troglodytes.NBAG03003562.1                        I 249 I 137
s Panthera_onca.PanOnc_flattened_line_1615                  30566 1 +    295523 A
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3634170 1 +  18214204 a
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5023947 1 -   6340057 a
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1062947 1 -   1292953 A
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188152180 1 - 188283584 a
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            48392 1 +     76494 A
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47509576 1 +  47705337 A
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 63559 1 -    104429 A
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  13343 1 -     29451 A
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                33748 1 +     35859 A
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    111898 1 -    135482 A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           1843 1 -     23713 A
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            21140 1 -     27972 A
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      39701 1 -     45160 G
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4946377 1 -   8017169 G
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            118304 1 -    122454 G
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           1435 1 -      3310 A
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       21341 1 -     82327 A
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           18092 1 +     19957 A
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26736101 1 +  26888534 a
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            93350 1 +    112873 A
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             39947 1 -     61926 A
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        21376 1 +     78826 A
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              5327 1 -     15800 A
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                         8525 1 -     16101 A
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          1834 1 +      9673 A
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13470828 1 -  19735023 A
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                            9736 1 -     31692 A
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           2371 1 +     21690 A
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       19128 1 +     44506 A
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        19346 1 +     67491 A
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                       9591 1 -     98129 A
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     19191 1 +    147771 A
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        19442 1 -     23762 A
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_2078842                         19390 1 -     19696 A
i Plecturocebus_dubius.k141_2078842                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         19264 1 +    152463 A
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      6021 1 +      8943 A
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                          8981 1 +    134592 A
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          19574 1 -     75465 A
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              183618 1 -    373494 C
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19803522 1 +  19899266 C
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               1671 1 -     15069 A
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              1805 1 +     14865 A
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                72995 1 +     78963 A
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6845002 1 +  12164890 a
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     13437 1 -     30946 a
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                            9 1 +     11805 G
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           39472 1 +     52369 A
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         31861 1 -     44753 A
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            13783 1 +     27322 A
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       13427 1 -     53241 A
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         35698 1 -     48185 A
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           29213 1 +     77221 A
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                             925 1 -     27784 a
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        241334 1 -    344369 A
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13243041 1 -  17261082 a
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             600995 1 -   3946241 a
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131530763 1 - 161321710 a
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             25796 1 +     56732 A
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6802286 1 +   6970761 A
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             1678 1 +     18040 A
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                12872 1 +     68503 A
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13911155 1 +  90463843 g
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1784642 1 +   2252614 a
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           12233 1 -     14454 A
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206373559 1 - 206558726 a
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44851207 1 -  45163003 A
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                16344 1 +    109198 A
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       4518 1 +     12214 A
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15668999 1 -  43202129 a
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                         874 1 +     34089 A
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                               805 1 -     60842 A
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                               874 1 +     67014 A
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                               874 1 +     60816 A
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                  802 1 -     76454 A
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17337382 1 -  30362882 A
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         16983 1 -     62485 A
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   28418 1 -    114521 G
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1527475                       24221 1 +     26421 A
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       4683 1 +     20762 A
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         38416 1 +     40653 A
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                            8975 1 -     12194 A
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     22394 1 -     27512 A
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         31415 1 -     33692 A
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   94443 1 -    120886 A
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            14640 1 +    739146 A
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2236298 1 +   2842873 g
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             231046 1 -    276980 A
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            24011 1 +     62062 A
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189268939 1 + 218635234 A
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                     13898345 1 +  13920577 A
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               2855 1 -      6213 A
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      803793 1 +   1148477 A
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  54455 1 +     99546 A
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               23133 1 +     42269 A
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               56447 1 +     65473 A
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194003715 1 - 194193292 a
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  132931 1 -    259118 A
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        22793 1 +     38948 A
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   16520 1 -     32910 A
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       22418 1 +     24652 A
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      1303 1 -      3559 A
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           39242 1 -     54611 A
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       15241 1 +     17312 A
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    22611 1 -     25040 A
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          1277 1 +      3528 A
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  47639 1 +     51589 A
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       10807 1 +     14732 A
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       1285 1 -     28054 A
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44656080 1 -  44834318 A
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        1090 1 +      3372 A
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   2281 1 +     90398 G
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16078380 1 +  31416278 a
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2787948 1 -   3938065 A
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                     508 1 +     13056 A
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69310405 1 -  96451834 G
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 23605 1 -     25548 A
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6511032 1 +  28682327 A
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  1945 1 -     20643 A
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             21490 1 -     33872 A
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1521724 1 -   2331223 A
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                134181 1 -    281493 C
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       123495 1 -    134049 T
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        210710 1 -    227762 A
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           3908 1 -      8775 G
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_141308              5625 53 -     12508 M
e Tolypeutes_matacus.TolMat_scaffold_269431                   660 0 +      6782 C
e Tamandua_tetradactyla.TamTet_scaffold_26877               11794 0 +     45698 C
e Noctilio_leporinus.NocLep_scaffold_12062                  46365 0 +     94413 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             2116 0 -      8794 C
e Miniopterus_schreibersii.MinSch_scaffold_24116            31119 0 +     45743 C
e Miniopterus_natalensis.LDJU01000022.1                   8206438 0 +  10048721 C
e Megaderma_lyra.MegLyr_scaffold_3562                       61508 0 -    234502 C
e Dasypus_novemcinctus.JH568778.1                          178731 0 -   6883506 C
e Choloepus_hoffmanni.KN194586.1                           758862 0 +    964067 C
e Choloepus_didactylus.ChoDid_scaffold_36182                13556 0 -     21363 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16291 1 -    119109 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     12283 2 -     20485 I
e Jaculus_jaculus.JH725517.1                              8561873 2 +  11848649 I
e Hylobates_pileatus_b.LG03                                     92553610 0 - 189753342 C
e Allactaga_bullata.AllBul_scaffold_70162                    8911 2 -     22067 I
e Octodon_degus.JH651621.1                                3675160 327 +  10294119 I
e Nannospalax_galili.KL201303.1                            107431 0 +    362372 C
e Dolichotis_patagonum.DolPat_scaffold_14102                33375 0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             56104 16 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                14631 16 +     26546 I
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 27026 118 -     67205 I
e Cricetulus_griseus.LT883672.1                          53025429 0 +  72327488 C
e Cavia_tschudii.CavTsc_scaffold_488                       173989 0 +    436027 C
e Cavia_porcellus.DS562889.1                             15795798 0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15783848 16 -  24422027 I
e Castor_canadensis.CasCan_scaffold_47037                   27073 4 +     33760 I
e Arctocebus_calabarensis.k141_1161114                      14526 30 +     17483 I

a score=0.000000
s hg38.chr4_GL000008v2_random                                8331 1 +    209709 T
s Acinonyx_jubatus.LLWD01000356.1                         2030424 1 +   3721120 t
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    108689 1 -    189883 T
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10653758 1 +  23371972 T
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7090260 1 -  16596857 t
i Ailurus_fulgens.LNAC01000003.1                        C 0 I 200
s Allenopithecus_nigroviridis.k141_3103707                  59354 1 +     61638 T
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        51162 1 +     53391 T
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         1886 1 +     72529 T
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          1462 1 +      3797 T
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             6555 1 -     18050 T
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  7672 1 -     11521 T
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              7230 1 -     21359 T
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1856473                                5613 1 +      7227 T
i Alouatta_juara.k141_1856473                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          6527 1 -     10438 T
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            3182 1 +      7047 T
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             6466 1 +     10410 T
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1374428                             269 1 -     25526 T
i Alouatta_puruensis.k141_1374428                       C 0 C 0
s Alouatta_seniculus.k141_990213                             3187 1 +      6429 T
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3516919 1 +   4113121 T
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      387379 1 -    631301 T
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            27827 1 +     33004 T
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 58861 1 +     78111 T
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            1792 1 +     22701 T
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5745752 1 +   9889416 t
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             2344 1 -    104377 T
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               2344 1 +     23246 T
i Aotus_vociferans.k141_718647                          C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 5478 1 -     29036 T
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9535605 1 +  39197703 T
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             56893 1 +     85812 T
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 7890 1 +     89302 T
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             12399 1 -     58268 T
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             60387 1 +    119057 T
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               2337 1 -     25888 T
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 3193 1 -     16375 C
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_767228                               9165 1 -      9688 C
i Avahi_peyrierasi.k141_767228                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26377131 1 +  51448160 T
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        2362 1 -     13118 T
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   40019 1 -     72089 T
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6556441 1 +   6870073 T
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138136672 1 - 161108492 T
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     569050 1 -    998990 T
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136292405 1 - 158972876 T
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1228026 1 -   1914593 T
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               110235 1 -    171031 T
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                  9261 1 +    125063 T
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                11309 1 -    216513 T
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        3848 1 -    134917 T
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3216163 1 -   8989139 T
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           394347 1 -  15254737 T
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2970084 1 +   6889770 T
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11515142 1 +  39901454 T
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   10159 1 +     87036 T
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11261801 1 -  35597290 T
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11084330 1 +  39895921 T
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16451364 1 -  44759192 T
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21322026 1 + 157394656 T
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135703253 1 - 157403528 T
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_647363                  1019 1 +      1887 t
i Capromys_pilorides.CapPil_scaffold_647363             C 0 C 0
s Carlito_syrichta.NW_007248099.1                          305644 1 +    345090 T
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               56556 1 +     67245 T
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   155877 1 -    276539 T
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18887074 1 -  29618158 T
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 4620 1 -     26817 T
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                 8860 1 +     25043 T
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         4693 1 +     21754 T
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4360343 1 +   7569818 T
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_520758          345 1 -       446 T
i Ceratotherium_simum_cottoni.CerCot_scaffold_520758    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6551150 1 +   6739814 t
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      52627 1 -     54931 T
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         17611 1 -     19697 T
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         55142 1 -    107033 T
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        1585 1 -      3853 T
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          25517 1 +     30494 T
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           1540 1 -      4022 T
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          1432 1 -      3505 T
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           20238 1 +     35983 T
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11986760 1 +  12117833 T
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46473513 1 +  46592721 T
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      31340 1 +     33420 T
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        1376 1 -      3443 T
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      2367 1 -      4669 T
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        2168 1 -      4411 T
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         1691 1 -      4205 T
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           55529 1 -     68416 T
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            4578 1 +     13308 T
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             1873 1 -     18223 T
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             18896 1 +     25473 T
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           37935 1 +     57117 T
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          42610 1 +     54541 T
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15958019 1 +  43084221 a
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         67456 1 +    196370 T
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          11630 1 +     40510 T
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15134971 1 -  15256731 T
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      30017 1 -     53260 T
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101140465 1 + 101219884 t
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                13556 1 -     21363 T
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           758862 1 +    964067 T
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10879047 1 +  10971483 t
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147660206 1 + 156195979 T
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            12191 1 +     23629 T
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60609823 1 +  78930452 C
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         36262 1 -     40477 T
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 274131 1 -    399297 T
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             15776 1 -     19186 A
i Crocidura_indochinensis.CroInd_scaffold_38409         I 6 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            48451 1 -     70449 T
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  204855 1 -    956709 T
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          178731 1 -   6883506 T
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16841403 1 +  31942871 T
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80033870 1 -  96802777 T
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18695866 1 -  18957592 t
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 319000 1 +    993696 T
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_170113                  263 1 +       818 T
i Diceros_bicornis.DicBicMic_scaffold_170113            C 0 C 0
s Dipodomys_ordii.KN672545.1                              3652160 1 +   4240102 t
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 23714 1 +     28912 T
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Echinops_telfairi.JH980316.1                           22991140 1 -  44670279 T
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                  9249 1 +     24177 t
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1488564 1 +   1727528 T
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7803290 1 +  15467074 t
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        235777 1 -    369425 t
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           2785 1 -      7838 t
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85867067 1 +  99434291 T
i Enhydra_lutris.KZ291749.1                             C 0 I 183
s Equus_asinus.JREZ01000137.1                             2952259 1 -   4388051 t
i Equus_asinus.JREZ01000137.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13346270 1 +  41866177 T
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                           8262 1 +     92910 T
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erythrocebus_patas.Contig8                             48767150 1 -  48907691 T
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          312015 1 +    330699 T
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             58444 1 +     89355 T
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              1599 1 +     13586 T
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               1536 1 -      6809 T
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             8007 1 +     36558 T
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             4324 1 +     60246 T
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 7812 1 +    109717 T
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               12186 1 +     16540 T
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                12463 1 +     27497 T
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           14919 1 +     26808 T
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                29652 1 +     46535 T
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              12375 1 -     29447 T
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129889404 1 - 159252932 t
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129276478 1 - 158578461 t
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 17613 1 +     52776 T
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13889603 1 -  19261668 t
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     207548 1 -    847004 T
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                            9928 1 -     43889 T
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           6977 1 +     27357 T
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               152862 1 +    324696 C
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    178077 1 -    189561 T
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                            9271 1 -     18683 T
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               1724 1 -     14630 T
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119648822 1 - 195582420 T
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   73828 1 +    118900 T
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                         2147 1 +      3980 T
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             24627 1 +     26611 T
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             2081 1 +     56096 T
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        25354 1 -     42470 T
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        41951 1 -     54384 T
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              13655 1 +     53719 T
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                24431 1 -     91191 T
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2547714 1 +  31725842 t
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               53132 1 +     73687 T
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              144140 1 +    277961 T
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      275560 1 -    477199 t
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              4714 1 -      9143 T
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg649                                    98396 1 +    115816 T
i Hoolock_leuconedys.ctg649                                C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 12723 1 -     67322 T
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hylobates_abbotti.k141_493872                              1533 1 +      5897 T
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_282275                                746 1 +      1846 T
i Hylobates_agilis.k141_282275                          C 0 C 0
s Hylobates_klossii.k141_466549                              7991 1 +     11537 T
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_muelleri.k141_1133650                             968 1 -      2775 T
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             29570 1 -     60944 T
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     2684 1 +     22540 T
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7122373 1 +  13083262 t
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_3334527                                   8591 1 +      9207 T
i Indri_indri.k141_3334527                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               5797 1 +     17520 T
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               20629 1 +     37189 T
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          46448 1 -    147782 T
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   110744 1 -    115756 T
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258403630 1 - 285822530 T
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        20524 1 +     39228 T
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            49900 1 +     63517 T
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        75120 1 +    116806 T
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     28161 1 -     33031 T
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3082426 1 -   3498232 T
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lipotes_vexillifer.KE558548.1                            132972 1 +   3060487 T
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19244236 1 +  19376315 T
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            7277 1 +     84689 T
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3775028 1 +   6799190 T
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20587706 1 -  62548349 t
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11083786 1 +  39895028 T
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             15922 1 +     74745 T
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12702428 1 +  12821369 T
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               4521 1 +      6569 T
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           42821 1 +     63263 T
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_1068107                               11398 1 +     12679 T
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                 971 1 +      3017 T
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  42583 1 -     79256 T
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196031503 1 + 196197964 t
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11441607 1 +  11645122 t
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   1533 1 -     46448 T
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                1360 1 -      3617 T
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 11693 1 -     55006 T
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43836732 1 +  43892939 T
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                3955 1 -      5978 T
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               1535 1 -     27140 T
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43433396 1 -  43563597 T
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4446222 1 -   4543643 T
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            143039 1 +    252755 T
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             33103 1 +     58827 T
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36870220 1 +  64221397 t
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_1828            224624 1 -    226874 T
i Mellivora_capensis.MelCap_flattened_line_1828         C 0 I 159
s Meriones_unguiculatus.MerUng_scaffold_52233                8153 1 +     15977 T
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1043043 1 -  26018355 T
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_183284                    668 1 +      2166 T
i Mesoplodon_bidens.MesBid_scaffold_183284              C 0 C 0
s Microcebus_murinus.CM007691.1                          16506745 1 +  47401472 t
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  28082 1 -     48017 T
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               19715 1 -     32043 T
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22815432 1 -  98408828 T
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        32070 1 +     34273 T
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         7724 1 -    104932 T
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     2159 1 +      8497 T
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 143395 1 +    154973 T
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                158035 1 +    265003 T
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 1662 1 -      4346 T
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  141345 1 -    168139 T
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          16252 1 -    100666 T
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70761791 1 +  92629107 T
i Mus_caroli.LT608236.1                                 I 173 C 0
s Mus_musculus.chr16                                     75484913 1 +  98207768 T
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67549229 1 +  89017189 T
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74324332 1 +  97876770 T
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              7782 1 +     98495 T
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4419477 1 -  28371801 T
i Mustela_putorius.JH417978.1                           C 0 I 182
s Myotis_brandtii.KE161952.1                               964579 1 +   8389877 t
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5016256 1 +   6462685 t
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3462165 1 -   3747815 t
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         7362 1 +     66751 T
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             2116 1 -      8794 T
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nasalis_larvatus.k141_153429                               4435 1 +     48152 T
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4481325 1 -  14209539 T
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3948004 1 -   4490290 T
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  46365 1 +     94413 T
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1223136                          10202 1 -     11253 T
i Nomascus_annamensis.k141_1223136                      C 0 C 0
s Nomascus_concolor.k141_190193                               458 1 -      1094 T
i Nomascus_concolor.k141_190193                         I 5 I 17
s Nomascus_gabriellae.k141_906566                             834 1 -      2544 T
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             21308 1 -  18771707 T
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_844529                                   583 1 +      2124 T
i Nomascus_siki_a.k141_844529                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                26782 1 +   3668941 T
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65563607 1 -  95554990 T
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                             452 1 +      6470 T
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65665976 1 +  89412551 T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Odobenus_rosmarus.KB229369.1                             675983 1 -   3126709 T
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1076787 1 +   1425656 t
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         33949 1 +     78940 T
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  121255 1 +    145789 T
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  33206 1 +     62360 T
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7221688 1 -   7562323 T
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              39941 1 -     66828 T
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      304117 1 -    505867 t
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       35616 1 +     38679 T
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18005057 1 -  38779656 T
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134074233 1 - 275406953 T
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      75447 1 +    140051 T
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127571066 1 - 205426864 T
i Pan_paniscus.CM003386.1                               I 1 C 0
s Pan_troglodytes.CM009241.2                            120148213 1 - 196562556 T
i Pan_troglodytes.CM009241.2                            I 1 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  30567 1 +    295523 T
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3634171 1 +  18214204 t
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5023948 1 -   6340057 t
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1062948 1 -   1292953 T
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188152181 1 - 188283584 t
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            48393 1 +     76494 T
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47509577 1 +  47705337 T
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 63560 1 -    104429 T
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  13344 1 -     29451 T
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                33749 1 +     35859 T
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    111899 1 -    135482 T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           1844 1 -     23713 T
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            21141 1 -     27972 T
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      39702 1 -     45160 T
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4946378 1 -   8017169 T
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            118305 1 -    122454 T
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           1436 1 -      3310 T
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       21342 1 -     82327 T
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           18093 1 +     19957 T
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26736102 1 +  26888534 t
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            93351 1 +    112873 T
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             39948 1 -     61926 T
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        21377 1 +     78826 T
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              5328 1 -     15800 T
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                         8526 1 -     16101 T
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          1835 1 +      9673 T
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13470829 1 -  19735023 T
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                            9737 1 -     31692 T
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           2372 1 +     21690 T
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       19129 1 +     44506 T
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        19347 1 +     67491 T
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                       9592 1 -     98129 T
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     19192 1 +    147771 T
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        19443 1 -     23762 T
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_2078842                         19391 1 -     19696 T
i Plecturocebus_dubius.k141_2078842                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         19265 1 +    152463 T
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      6022 1 +      8943 T
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                          8982 1 +    134592 T
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          19575 1 -     75465 T
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              183619 1 -    373494 T
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19803523 1 +  19899266 T
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               1672 1 -     15069 T
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              1806 1 +     14865 T
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                72996 1 +     78963 T
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6845003 1 +  12164890 t
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     13438 1 -     30946 c
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                           10 1 +     11805 C
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           39473 1 +     52369 C
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         31862 1 -     44753 C
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            13784 1 +     27322 C
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       13428 1 -     53241 C
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         35699 1 -     48185 C
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           29214 1 +     77221 T
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                             926 1 -     27784 t
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        241335 1 -    344369 T
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 I 183
s Pteropus_alecto.KB031157.1                             13243042 1 -  17261082 t
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             600996 1 -   3946241 t
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131530764 1 - 161321710 t
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             25797 1 +     56732 T
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6802287 1 +   6970761 T
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             1679 1 +     18040 T
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                12873 1 +     68503 T
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13911156 1 +  90463843 t
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1784643 1 +   2252614 t
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           12234 1 -     14454 T
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206373560 1 - 206558726 t
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44851208 1 -  45163003 T
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                16345 1 +    109198 T
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       4519 1 +     12214 T
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15669000 1 -  43202129 t
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                         875 1 +     34089 T
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                               806 1 -     60842 T
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                               875 1 +     67014 T
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                               875 1 +     60816 T
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                  803 1 -     76454 T
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17337383 1 -  30362882 T
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         16984 1 -     62485 T
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   28419 1 -    114521 T
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1527475                       24222 1 +     26421 T
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       4684 1 +     20762 T
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         38417 1 +     40653 T
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                            8976 1 -     12194 T
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     22395 1 -     27512 T
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         31416 1 -     33692 T
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   94444 1 -    120886 T
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            14641 1 +    739146 T
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2236299 1 +   2842873 t
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             231047 1 -    276980 T
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 I 181
s Suricata_suricatta.SurSur_flattened_line_20339            24012 1 +     62062 T
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189268940 1 + 218635234 T
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                     13898346 1 +  13920577 T
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               2856 1 -      6213 T
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               11794 1 +     45698 T
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      803794 1 +   1148477 T
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  54456 1 +     99546 T
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               23134 1 +     42269 T
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               56448 1 +     65473 T
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194003716 1 - 194193292 t
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                   660 1 +      6782 T
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  132932 1 -    259118 T
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        22794 1 +     38948 T
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   16521 1 -     32910 T
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       22419 1 +     24652 T
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      1304 1 -      3559 T
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           39243 1 -     54611 T
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       15242 1 +     17312 T
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    22612 1 -     25040 T
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          1278 1 +      3528 T
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  47640 1 +     51589 T
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       10808 1 +     14732 T
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       1286 1 -     28054 T
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44656081 1 -  44834318 T
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        1091 1 +      3372 T
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   2282 1 +     90398 T
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16078381 1 +  31416278 T
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2787949 1 -   3938065 T
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                     509 1 +     13056 T
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69310406 1 -  96451834 T
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 23606 1 -     25548 T
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6511033 1 +  28682327 T
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  1946 1 -     20643 T
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             21491 1 -     33872 T
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1521725 1 -   2331223 T
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                134182 1 -    281493 T
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       123496 1 -    134049 T
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        210711 1 -    227762 T
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           3909 1 -      8775 T
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_141308              5625 53 -     12508 M
e Miniopterus_schreibersii.MinSch_scaffold_24116            31119 0 +     45743 C
e Miniopterus_natalensis.LDJU01000022.1                   8206438 0 +  10048721 C
e Megaderma_lyra.MegLyr_scaffold_3562                       61508 0 -    234502 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16291 1 -    119109 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     12283 2 -     20485 I
e Jaculus_jaculus.JH725517.1                              8561873 2 +  11848649 I
e Hylobates_pileatus_b.LG03                                     92553610 0 - 189753342 C
e Allactaga_bullata.AllBul_scaffold_70162                    8911 2 -     22067 I
e Octodon_degus.JH651621.1                                3675160 327 +  10294119 I
e Nannospalax_galili.KL201303.1                            107431 0 +    362372 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     86755 2 -    117718 I
e Dolichotis_patagonum.DolPat_scaffold_14102                33375 0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             56104 16 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                14631 16 +     26546 I
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 27026 118 -     67205 I
e Cricetulus_griseus.LT883672.1                          53025429 0 +  72327488 C
e Cavia_tschudii.CavTsc_scaffold_488                       173989 0 +    436027 C
e Cavia_porcellus.DS562889.1                             15795798 0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15783848 16 -  24422027 I
e Castor_canadensis.CasCan_scaffold_47037                   27073 4 +     33760 I
e Arctocebus_calabarensis.k141_1161114                      14526 30 +     17483 I

a score=0.000000
s hg38.chr4_GL000008v2_random                                8332 1 +    209709 T
s Acinonyx_jubatus.LLWD01000356.1                         2030425 1 +   3721120 c
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    108690 1 -    189883 G
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 I 4
s Ailuropoda_melanoleuca.LNAT01000321.1                  10653759 1 +  23371972 C
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7090461 1 -  16596857 c
i Ailurus_fulgens.LNAC01000003.1                        I 200 C 0
s Allenopithecus_nigroviridis.k141_3103707                  59355 1 +     61638 T
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        51163 1 +     53391 T
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         1887 1 +     72529 T
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          1463 1 +      3797 T
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             6556 1 -     18050 T
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  7673 1 -     11521 T
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              7231 1 -     21359 T
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1856473                                5614 1 +      7227 T
i Alouatta_juara.k141_1856473                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          6528 1 -     10438 T
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            3183 1 +      7047 T
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             6467 1 +     10410 T
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1374428                             270 1 -     25526 T
i Alouatta_puruensis.k141_1374428                       C 0 C 0
s Alouatta_seniculus.k141_990213                             3188 1 +      6429 T
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3516920 1 +   4113121 T
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      387380 1 -    631301 T
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            27828 1 +     33004 T
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 58862 1 +     78111 T
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            1793 1 +     22701 T
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5745753 1 +   9889416 t
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             2345 1 -    104377 T
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               2345 1 +     23246 T
i Aotus_vociferans.k141_718647                          C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 5479 1 -     29036 C
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9535606 1 +  39197703 T
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             56894 1 +     85812 T
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 7891 1 +     89302 T
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             12400 1 -     58268 T
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             60388 1 +    119057 T
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               2338 1 -     25888 T
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 3194 1 -     16375 T
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_767228                               9166 1 -      9688 T
i Avahi_peyrierasi.k141_767228                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26377132 1 +  51448160 C
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        2363 1 -     13118 T
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   40020 1 -     72089 T
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6556442 1 +   6870073 T
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138136673 1 - 161108492 T
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     569051 1 -    998990 T
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136292406 1 - 158972876 T
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1228027 1 -   1914593 T
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               110236 1 -    171031 T
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                  9262 1 +    125063 T
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                11310 1 -    216513 T
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        3849 1 -    134917 T
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3216164 1 -   8989139 T
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           394348 1 -  15254737 T
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2970085 1 +   6889770 T
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11515143 1 +  39901454 C
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   10160 1 +     87036 C
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11261802 1 -  35597290 C
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11084331 1 +  39895921 C
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16451365 1 -  44759192 C
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21322027 1 + 157394656 T
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135703254 1 - 157403528 T
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_647363                  1020 1 +      1887 a
i Capromys_pilorides.CapPil_scaffold_647363             C 0 I 34
s Carlito_syrichta.NW_007248099.1                          305645 1 +    345090 T
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               56557 1 +     67245 T
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   155878 1 -    276539 T
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18887075 1 -  29618158 T
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 4621 1 -     26817 T
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                 8861 1 +     25043 T
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         4694 1 +     21754 T
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4360344 1 +   7569818 T
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_520758          346 1 -       446 T
i Ceratotherium_simum_cottoni.CerCot_scaffold_520758    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6551151 1 +   6739814 t
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      52628 1 -     54931 T
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         17612 1 -     19697 T
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         55143 1 -    107033 T
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        1586 1 -      3853 T
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          25518 1 +     30494 T
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           1541 1 -      4022 T
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          1433 1 -      3505 G
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           20239 1 +     35983 T
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11986761 1 +  12117833 T
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46473514 1 +  46592721 T
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      31341 1 +     33420 T
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        1377 1 -      3443 T
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      2368 1 -      4669 T
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        2169 1 -      4411 T
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         1692 1 -      4205 T
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           55530 1 -     68416 T
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            4579 1 +     13308 T
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             1874 1 -     18223 T
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             18897 1 +     25473 T
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           37936 1 +     57117 T
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          42611 1 +     54541 T
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15958020 1 +  43084221 c
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         67457 1 +    196370 T
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          11631 1 +     40510 T
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15134972 1 -  15256731 T
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      30018 1 -     53260 T
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101140466 1 + 101219884 t
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                13557 1 -     21363 T
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           758863 1 +    964067 T
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10879048 1 +  10971483 t
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147660207 1 + 156195979 T
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            12192 1 +     23629 T
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60609824 1 +  78930452 T
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         36263 1 -     40477 T
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 274132 1 -    399297 G
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 I 4
s Crocidura_indochinensis.CroInd_scaffold_38409             15777 1 -     19186 T
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            48452 1 -     70449 C
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  204856 1 -    956709 T
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          178732 1 -   6883506 T
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16841404 1 +  31942871 T
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80033871 1 -  96802777 T
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18695867 1 -  18957592 t
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 319001 1 +    993696 T
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_170113                  264 1 +       818 T
i Diceros_bicornis.DicBicMic_scaffold_170113            C 0 C 0
s Dipodomys_ordii.KN672545.1                              3652161 1 +   4240102 t
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 23715 1 +     28912 T
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Echinops_telfairi.JH980316.1                           22991141 1 -  44670279 T
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                  9250 1 +     24177 t
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1488565 1 +   1727528 T
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7803291 1 +  15467074 a
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        235778 1 -    369425 t
i Ellobius_lutescens.LOEQ01003611.1                     C 0 I 4
s Ellobius_talpinus.LOJH01090055.1                           2786 1 -      7838 G
i Ellobius_talpinus.LOJH01090055.1                      C 0 I 4
s Enhydra_lutris.KZ291749.1                              85867251 1 +  99434291 c
i Enhydra_lutris.KZ291749.1                             I 183 C 0
s Equus_asinus.JREZ01000137.1                             2952260 1 -   4388051 t
i Equus_asinus.JREZ01000137.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13346271 1 +  41866177 T
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                           8263 1 +     92910 T
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erythrocebus_patas.Contig8                             48767151 1 -  48907691 T
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          312016 1 +    330699 T
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             58445 1 +     89355 T
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              1600 1 +     13586 T
i Eulemur_albifrons.k141_715837                         C 0 I 1
s Eulemur_collaris.k141_311830                               1537 1 -      6809 T
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             8008 1 +     36558 T
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             4325 1 +     60246 T
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 7813 1 +    109717 T
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               12187 1 +     16540 T
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                12464 1 +     27497 T
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           14920 1 +     26808 T
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                29653 1 +     46535 T
i Eulemur_rufus.k141_1620292                            C 0 I 1
s Eulemur_sanfordi.k141_186399                              12376 1 -     29447 T
i Eulemur_sanfordi.k141_186399                          C 0 I 1
s Felis_catus.CM001386.2                                129889405 1 - 159252932 c
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129276479 1 - 158578461 c
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 17614 1 +     52776 C
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13889604 1 -  19261668 t
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     207549 1 -    847004 T
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                            9929 1 -     43889 T
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           6978 1 +     27357 T
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               152863 1 +    324696 T
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    178078 1 -    189561 T
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                            9272 1 -     18683 T
i Glis_glis.GliGli_scaffold_79770                       C 0 I 4
s Gorilla_beringei.k141_111300                               1725 1 -     14630 T
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119648823 1 - 195582420 T
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   73829 1 +    118900 T
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 I 4
s Hapalemur_alaotrensis.k141_1198205                         2148 1 +      3980 T
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             24628 1 +     26611 T
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             2082 1 +     56096 T
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        25355 1 -     42470 T
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        41952 1 -     54384 T
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              13656 1 +     53719 C
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                24432 1 -     91191 T
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2547715 1 +  31725842 t
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               53133 1 +     73687 T
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              144141 1 +    277961 T
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      275561 1 -    477199 t
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              4715 1 -      9143 T
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg649                                    98397 1 +    115816 T
i Hoolock_leuconedys.ctg649                                C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 12724 1 -     67322 C
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hylobates_abbotti.k141_493872                              1534 1 +      5897 T
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_282275                                747 1 +      1846 T
i Hylobates_agilis.k141_282275                          C 0 C 0
s Hylobates_klossii.k141_466549                              7992 1 +     11537 T
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_muelleri.k141_1133650                             969 1 -      2775 T
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             29571 1 -     60944 T
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     2685 1 +     22540 T
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7122374 1 +  13083262 t
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 I 4
s Indri_indri.k141_3334527                                   8592 1 +      9207 T
i Indri_indri.k141_3334527                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               5798 1 +     17520 T
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               20630 1 +     37189 T
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          46449 1 -    147782 T
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lemur_catta.scaffold_1                                258403631 1 - 285822530 T
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        20525 1 +     39228 T
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            49901 1 +     63517 T
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        75121 1 +    116806 T
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     28162 1 -     33031 T
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3082427 1 -   3498232 C
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lipotes_vexillifer.KE558548.1                            132973 1 +   3060487 T
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19244237 1 +  19376315 T
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            7278 1 +     84689 T
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3775029 1 +   6799190 T
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20587707 1 -  62548349 t
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11083787 1 +  39895028 C
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             15923 1 +     74745 T
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12702429 1 +  12821369 T
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               4522 1 +      6569 T
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           42822 1 +     63263 T
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_1068107                               11399 1 +     12679 T
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                 972 1 +      3017 T
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  42584 1 -     79256 T
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196031504 1 + 196197964 t
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11441608 1 +  11645122 t
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   1534 1 -     46448 T
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                1361 1 -      3617 T
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 11694 1 -     55006 T
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43836733 1 +  43892939 T
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                3956 1 -      5978 T
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               1536 1 -     27140 T
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43433397 1 -  43563597 T
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4446223 1 -   4543643 T
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            143040 1 +    252755 T
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             33104 1 +     58827 T
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36870221 1 +  64221397 t
i Marmota_marmota.CZRN01000005.1                        C 0 I 4
s Mellivora_capensis.MelCap_flattened_line_1828            224784 1 -    226874 C
i Mellivora_capensis.MelCap_flattened_line_1828         I 159 C 0
s Mesocricetus_auratus.KB708139.1                         1043044 1 -  26018355 G
i Mesocricetus_auratus.KB708139.1                       C 0 I 4
s Mesoplodon_bidens.MesBid_scaffold_183284                    669 1 +      2166 T
i Mesoplodon_bidens.MesBid_scaffold_183284              C 0 C 0
s Microcebus_murinus.CM007691.1                          16506746 1 +  47401472 t
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  28083 1 -     48017 T
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               19716 1 -     32043 T
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22815433 1 -  98408828 G
i Microtus_ochrogaster.CM001673.1                       C 0 I 4
s Miopithecus_ogouensis.k141_2666161                        32071 1 +     34273 T
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         7725 1 -    104932 C
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     2160 1 +      8497 T
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 143396 1 +    154973 T
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                158036 1 +    265003 T
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 1663 1 -      4346 T
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  141346 1 -    168139 C
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Mus_caroli.LT608236.1                                  70761792 1 +  92629107 G
i Mus_caroli.LT608236.1                                 C 0 I 4
s Mus_musculus.chr16                                     75484914 1 +  98207768 G
i Mus_musculus.chr16                                    C 0 I 4
s Mus_pahari.LT608305.1                                  67549230 1 +  89017189 G
i Mus_pahari.LT608305.1                                 C 0 I 4
s Mus_spretus.CM004110.1                                 74324333 1 +  97876770 G
i Mus_spretus.CM004110.1                                C 0 I 4
s Muscardinus_avellanarius.MusAve_scaffold_9643              7783 1 +     98495 T
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 I 4
s Mustela_putorius.JH417978.1                             4419660 1 -  28371801 c
i Mustela_putorius.JH417978.1                           I 182 I 1
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             2117 1 -      8794 T
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nasalis_larvatus.k141_153429                               4436 1 +     48152 T
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4481326 1 -  14209539 C
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3948005 1 -   4490290 T
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  46366 1 +     94413 T
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1223136                          10203 1 -     11253 T
i Nomascus_annamensis.k141_1223136                      C 0 C 0
s Nomascus_concolor.k141_468488                               846 1 -      1482 T
i Nomascus_concolor.k141_468488                         I 1 C 0
s Nomascus_gabriellae.k141_906566                             835 1 -      2544 T
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             21309 1 -  18771707 T
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_844529                                   584 1 +      2124 T
i Nomascus_siki_a.k141_844529                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                26783 1 +   3668941 C
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65563608 1 -  95554990 T
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                             453 1 +      6470 T
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65665977 1 +  89412551 T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Odobenus_rosmarus.KB229369.1                             675984 1 -   3126709 C
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1076788 1 +   1425656 t
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         33950 1 +     78940 T
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  121256 1 +    145789 G
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 I 4
s Onychomys_torridus.OnyTor_scaffold_12578                  33207 1 +     62360 G
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 I 4
s Orcinus_orca.KB316965.1                                 7221689 1 -   7562323 T
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              39942 1 -     66828 T
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      304118 1 -    505867 c
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       35617 1 +     38679 T
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18005058 1 -  38779656 t
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134074234 1 - 275406953 T
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      75448 1 +    140051 T
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127571067 1 - 205426864 T
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120148214 1 - 196562556 T
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  30568 1 +    295523 C
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3634172 1 +  18214204 c
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5023949 1 -   6340057 c
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1062949 1 -   1292953 T
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188152182 1 - 188283584 t
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            48394 1 +     76494 T
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47509578 1 +  47705337 T
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 63561 1 -    104429 T
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  13345 1 -     29451 T
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                33750 1 +     35859 T
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    111900 1 -    135482 C
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           1845 1 -     23713 G
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            21142 1 -     27972 G
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      39703 1 -     45160 T
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4946379 1 -   8017169 G
i Peromyscus_maniculatus.KI615518.1                     C 0 I 4
s Phocoena_phocoena.PhoPho_flattened_line_11948            118306 1 -    122454 T
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           1437 1 -      3310 T
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       21343 1 -     82327 T
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           18094 1 +     19957 T
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26736103 1 +  26888534 t
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pithecia_albicans.k141_991845                             39949 1 -     61926 T
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        21378 1 +     78826 T
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              5329 1 -     15800 T
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                         8527 1 -     16101 T
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          1836 1 +      9673 T
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13470830 1 -  19735023 T
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                            9738 1 -     31692 T
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           2373 1 +     21690 T
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       19130 1 +     44506 T
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        19348 1 +     67491 T
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                       9593 1 -     98129 T
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     19193 1 +    147771 T
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        19444 1 -     23762 T
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_2078842                         19392 1 -     19696 T
i Plecturocebus_dubius.k141_2078842                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         19266 1 +    152463 T
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      6023 1 +      8943 T
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                          8983 1 +    134592 T
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          19576 1 -     75465 T
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              183620 1 -    373494 T
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19803524 1 +  19899266 T
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               1673 1 -     15069 T
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              1807 1 +     14865 T
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                72997 1 +     78963 T
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6845004 1 +  12164890 t
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     13439 1 -     30946 t
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                           11 1 +     11805 T
i Propithecus_coronatus.k141_1353159                    C 0 I 1
s Propithecus_diadema.k141_577245                           39474 1 +     52369 T
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         31863 1 -     44753 T
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            13785 1 +     27322 T
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       13429 1 -     53241 T
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         35700 1 -     48185 T
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           29215 1 +     77221 G
i Psammomys_obesus.NESX01026517.1                       C 0 I 4
s Pteronotus_parnellii.KE867983.1                             927 1 -     27784 t
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        241519 1 -    344369 C
i Pteronura_brasiliensis.PteBra_flattened_line_1343     I 183 C 0
s Pteropus_alecto.KB031157.1                             13243043 1 -  17261082 t
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             600997 1 -   3946241 t
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131530765 1 - 161321710 c
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             25798 1 +     56732 T
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6802288 1 +   6970761 T
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             1680 1 +     18040 T
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                12874 1 +     68503 T
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13911157 1 +  90463843 G
i Rattus_norvegicus.chr11                               C 0 I 4
s Rhinolophus_sinicus.LVEH01000179.1                      1784644 1 +   2252614 t
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           12235 1 -     14454 T
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206373561 1 - 206558726 t
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44851209 1 -  45163003 T
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                16346 1 +    109198 T
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       4520 1 +     12214 T
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15669001 1 -  43202129 t
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                         876 1 +     34089 T
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                               807 1 -     60842 T
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                               876 1 +     67014 T
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                               876 1 +     60816 T
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                  804 1 -     76454 T
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17337384 1 -  30362882 T
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         16985 1 -     62485 T
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   28420 1 -    114521 T
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1527475                       24223 1 +     26421 T
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       4685 1 +     20762 T
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         38418 1 +     40653 T
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                            8977 1 -     12194 T
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     22396 1 -     27512 T
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         31417 1 -     33692 T
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   94445 1 -    120886 G
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 I 4
s Solenodon_paradoxus.SolPar_flattened_line_1012            14642 1 +    739146 T
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2236300 1 +   2842873 t
i Spermophilus_dauricus.KZ294190.1                      C 0 I 4
s Spilogale_gracilis.SpiGra_flattened_line_905             231229 1 -    276980 C
i Spilogale_gracilis.SpiGra_flattened_line_905          I 181 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            24013 1 +     62062 C
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189268941 1 + 218635234 T
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                     13898347 1 +  13920577 T
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               2857 1 -      6213 T
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 I 6
s Tamandua_tetradactyla.TamTet_scaffold_26877               11795 1 +     45698 T
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      803795 1 +   1148477 T
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  54457 1 +     99546 T
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               23135 1 +     42269 T
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               56449 1 +     65473 T
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194003717 1 - 194193292 t
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                   661 1 +      6782 T
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  132933 1 -    259118 T
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        22795 1 +     38948 T
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   16522 1 -     32910 T
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       22420 1 +     24652 T
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      1305 1 -      3559 T
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           39244 1 -     54611 T
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       15243 1 +     17312 T
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    22613 1 -     25040 T
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          1279 1 +      3528 T
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  47641 1 +     51589 T
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       10809 1 +     14732 T
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       1287 1 -     28054 T
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44656082 1 -  44834318 T
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        1092 1 +      3372 T
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   2283 1 +     90398 T
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16078382 1 +  31416278 T
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2787950 1 -   3938065 C
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                     510 1 +     13056 C
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69310407 1 -  96451834 T
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 23607 1 -     25548 T
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6511034 1 +  28682327 C
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  1947 1 -     20643 T
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             21492 1 -     33872 T
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1521726 1 -   2331223 T
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                134183 1 -    281493 C
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 I 5
s Xerus_inauris.XerIna_scaffold_7898                       123497 1 -    134049 T
i Xerus_inauris.XerIna_scaffold_7898                    C 0 I 4
s Zalophus_californianus.ZalCal_flattened_line_4097        210712 1 -    227762 C
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           3910 1 -      8775 T
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_141308              5625 53 -     12508 M
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            93352 0 +    112873 C
e Myotis_myotis.MyoMyo_scaffold_6123                         7363 0 +     66751 C
e Myotis_lucifugus.GL429887.1                             3462166 0 -   3747815 C
e Myotis_davidii.KB114863.1                               5016257 0 +   6462685 C
e Myotis_brandtii.KE161952.1                               964580 0 +   8389877 C
e Murina_feae.MurFea_scaffold_2254                          16253 0 -    100666 C
e Miniopterus_schreibersii.MinSch_scaffold_24116            31119 0 +     45743 C
e Miniopterus_natalensis.LDJU01000022.1                   8206438 0 +  10048721 C
e Megaderma_lyra.MegLyr_scaffold_3562                       61508 0 -    234502 C
e Lasiurus_borealis.LasBor_scaffold_5102                   110745 0 -    115756 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16291 1 -    119109 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     12283 2 -     20485 I
e Jaculus_jaculus.JH725517.1                              8561873 2 +  11848649 I
e Hylobates_pileatus_b.LG03                                     92553610 0 - 189753342 C
e Allactaga_bullata.AllBul_scaffold_70162                    8911 2 -     22067 I
e Octodon_degus.JH651621.1                                3675160 327 +  10294119 I
e Nannospalax_galili.KL201303.1                            107431 0 +    362372 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     86755 2 -    117718 I
e Meriones_unguiculatus.MerUng_scaffold_52233                8154 0 +     15977 C
e Dolichotis_patagonum.DolPat_scaffold_14102                33375 0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             56104 16 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                14631 16 +     26546 I
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 27026 118 -     67205 I
e Cricetulus_griseus.LT883672.1                          53025429 0 +  72327488 C
e Cavia_tschudii.CavTsc_scaffold_488                       173989 0 +    436027 C
e Cavia_porcellus.DS562889.1                             15795798 0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15783848 16 -  24422027 I
e Castor_canadensis.CasCan_scaffold_47037                   27073 4 +     33760 I
e Arctocebus_calabarensis.k141_1161114                      14526 30 +     17483 I

a score=0.000000
s hg38.chr4_GL000008v2_random                                8333  6 +    209709 A--------AA-A-T-T
s Acinonyx_jubatus.LLWD01000356.1                         2030426  7 +   3721120 a--------aa-a-att
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    108695  2 -    189883 --------------T-T
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 4 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10653760  7 +  23371972 A--------GA-A-TTT
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7090462  5 -  16596857 a--------GA-A-T--
i Ailurus_fulgens.LNAC01000003.1                        C 0 I 1
s Allenopithecus_nigroviridis.k141_3103707                  59356  6 +     61638 A--------AA-A-T-T
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        51164  6 +     53391 A--------AA-A-T-T
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         1888  6 +     72529 A--------AA-A-T-T
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          1464  6 +      3797 A--------AA-A-T-T
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             6557  6 -     18050 A--------AA-A-T-T
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  7674  6 -     11521 A--------AA-A-T-T
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              7232  6 -     21359 A--------AA-A-T-T
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1856473                                5615  6 +      7227 A--------AA-A-T-T
i Alouatta_juara.k141_1856473                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          6529  6 -     10438 A--------AA-A-A-T
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            3184  6 +      7047 A--------AA-A-T-T
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             6468  6 +     10410 A--------AA-A-T-T
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1374428                             271  6 -     25526 A--------AA-A-T-T
i Alouatta_puruensis.k141_1374428                       C 0 C 0
s Alouatta_seniculus.k141_990213                             3189  6 +      6429 A--------AA-A-T-T
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3516921  6 +   4113121 A--------GA-A-T-T
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      387381  6 -    631301 A--------AA-A-T-T
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            27829  6 +     33004 A--------GA-A-T-T
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 58863  6 +     78111 A--------AA-A-T-T
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            1794  6 +     22701 A--------AA-A-T-T
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5745754  6 +   9889416 a--------aa-a-t-t
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             2346  6 -    104377 A--------AA-A-T-T
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               2346  6 +     23246 A--------AA-A-T-T
i Aotus_vociferans.k141_718647                          C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 5480  6 -     29036 A--------AA-A-T-T
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9535607  6 +  39197703 A--------AA-A-T-T
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             56895  6 +     85812 A--------AA-A-T-T
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 7892  6 +     89302 A--------AA-A-T-T
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             12401  6 -     58268 A--------AA-A-T-T
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             60389  6 +    119057 A--------AA-A-T-T
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               2339  6 -     25888 A--------AA-A-T-T
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 3195  6 -     16375 A--------AA-A-T-T
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_767228                               9167  6 -      9688 A--------AA-A-T-T
i Avahi_peyrierasi.k141_767228                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26377133  6 +  51448160 A--------GA-A-T-T
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        2364  6 -     13118 A--------GA-A-T-T
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   40021  6 -     72089 A--------GA-A-T-T
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6556443  6 +   6870073 A--------GA-A-T-T
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138136674  6 - 161108492 A--------GA-A-T-T
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     569052  6 -    998990 A--------GA-A-T-T
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136292407  6 - 158972876 A--------GA-A-T-T
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1228028  6 -   1914593 A--------GA-A-T-T
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               110237  6 -    171031 A--------AA-A-T-T
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                  9263  6 +    125063 A--------AA-A-T-T
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                11311  6 -    216513 A--------AA-A-T-T
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        3850  6 -    134917 A--------AA-A-T-T
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3216165  6 -   8989139 A--------GA-A-T-T
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           394349  6 -  15254737 A--------GA-A-T-T
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2970086  6 +   6889770 A--------GA-A-T-T
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11515144  7 +  39901454 A--------GA-A-TTT
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   10161  7 +     87036 A--------GA-A-TTT
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11261803  7 -  35597290 A--------GA-A-TTT
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11084332  7 +  39895921 A--------GA-A-TTT
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16451366  7 -  44759192 A--------GA-A-TTT
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21322028  6 + 157394656 A--------GA-G-T-T
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135703255  6 - 157403528 A--------GA-G-T-T
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_647363                  1055 14 +      1887 taacatttcta-g-t-g
i Capromys_pilorides.CapPil_scaffold_647363             I 34 C 0
s Carlito_syrichta.NW_007248099.1                          305646  6 +    345090 A--------AA-A-T-T
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               56558  6 +     67245 A--------AA-A-T-T
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   27077  5 +     33760 ---------TA-G-T-C
i Castor_canadensis.CasCan_scaffold_47037               I 4 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   155879  6 -    276539 A--------GA-A-T-T
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18887076  6 -  29618158 A--------AA-A-T-T
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 4622  6 -     26817 A--------AA-A-T-T
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                 8862  6 +     25043 A--------AA-A-T-T
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         4695  6 +     21754 A--------AA-A-T-T
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4360345  6 +   7569818 A--------GA-A-T-T
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_520758          347  6 -       446 A--------GA-A-T-T
i Ceratotherium_simum_cottoni.CerCot_scaffold_520758    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6551152  6 +   6739814 a--------aa-a-t-t
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      52629  6 -     54931 A--------AA-A-T-T
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         17613  6 -     19697 A--------AA-A-T-T
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         55144  6 -    107033 A--------AA-A-T-T
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        1587  6 -      3853 A--------AA-A-T-T
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          25519  6 +     30494 A--------AA-A-T-T
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           1542  6 -      4022 A--------AA-A-T-T
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          1434  6 -      3505 A--------AA-A-T-T
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           20240  6 +     35983 A--------AA-A-T-T
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11986762  6 +  12117833 A--------AA-A-T-T
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46473515  6 +  46592721 A--------AA-A-T-T
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      31342  6 +     33420 A--------AA-A-T-T
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        1378  6 -      3443 A--------AA-A-T-T
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      2369  6 -      4669 A--------AA-A-T-T
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        2170  6 -      4411 A--------AA-A-T-T
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         1693  6 -      4205 A--------AA-A-T-T
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           55531  6 -     68416 A--------AA-A-T-T
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            4580  6 +     13308 A--------AA-A-T-T
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             1875  6 -     18223 A--------AA-A-T-T
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             18898  6 +     25473 A--------AA-A-T-T
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           37937  6 +     57117 A--------AA-A-T-T
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          42612  6 +     54541 A--------AA-A-T-T
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15958021 14 +  43084221 aaacatttcca-a-t-t
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         67458  6 +    196370 A--------AA-A-T-T
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          11632  6 +     40510 A--------AA-A-T-T
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15134973  6 -  15256731 A--------AA-A-T-T
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      30019  6 -     53260 A--------AA-A-T-T
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101140467  6 + 101219884 a--------aa-a-t-t
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                13558  6 -     21363 A--------AG-A-T-T
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           758864  6 +    964067 A--------AG-A-T-G
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10879049  6 +  10971483 a--------aa-a-t-t
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147660208  6 + 156195979 A--------AA-A-T-T
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            12193  6 +     23629 A--------AA-A-T-T
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60609825  6 +  78930452 A--------GA-C-T-T
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         36264  6 -     40477 A--------AT-A-T-T
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 274137  2 -    399297 --------------T-T
i Cricetomys_gambianus.CriGam_scaffold_949              I 4 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             15778  6 -     19186 A--------GC-A-T-A
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            48453  7 -     70449 A--------AA-T-TTT
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  204857 14 -    956709 AAAAGTTTCCA-A-T-T
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 27144  2 -     67205 --------------T-G
i Ctenomys_sociabilis.CteSoc_scaffold_19489             I 118 C 0
s Dasypus_novemcinctus.JH568778.1                          178733  6 -   6883506 A--------AG-A-T-T
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16841405  6 +  31942871 A--------AA-A-T-T
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80033872  6 -  96802777 A--------GA-A-T-T
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18695868  6 -  18957592 a--------aa-a-t-t
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 319002  6 +    993696 A--------GA-A-T-T
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_170113                  265  6 +       818 A--------GA-A-T-T
i Diceros_bicornis.DicBicMic_scaffold_170113            C 0 C 0
s Dipodomys_ordii.KN672545.1                              3652162  1 +   4240102 a----------------
i Dipodomys_ordii.KN672545.1                            C 0 I 3
s Dipodomys_stephensi.DipSte_scaffold_44365                 23716  1 +     28912 A----------------
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 I 3
s Echinops_telfairi.JH980316.1                           22991142  6 -  44670279 A--------AT-A-T-A
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                  9251  6 +     24177 a--------aa-a-t-t
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1488566  6 +   1727528 A--------GA-A-T-T
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7803292  6 +  15467074 a--------gg-a-a-t
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        235783  2 -    369425 --------------T-T
i Ellobius_lutescens.LOEQ01003611.1                     I 4 C 0
s Ellobius_talpinus.LOJH01090055.1                           2791  2 -      7838 --------------T-T
i Ellobius_talpinus.LOJH01090055.1                      I 4 C 0
s Enhydra_lutris.KZ291749.1                              85867252  7 +  99434291 a--------GG-A-TTT
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Equus_asinus.JREZ01000137.1                             2952261  6 -   4388051 a--------aa-a-t-t
i Equus_asinus.JREZ01000137.1                           C 0 N 0
s Equus_caballus.CM000402.2                              13346272  6 +  41866177 A--------AA-A-T-T
i Equus_caballus.CM000402.2                             C 0 I 1963
s Equus_przewalskii.ATBW01073585.1                           8264  6 +     92910 A--------AA-A-T-T
i Equus_przewalskii.ATBW01073585.1                      C 0 I 1461
s Erythrocebus_patas.Contig8                             48767152  6 -  48907691 A--------AA-A-T-T
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          312017  6 +    330699 A--------GA-A-T-T
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             58446  6 +     89355 A--------GA-A-T-T
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              1602  6 +     13586 A--------AA-A-T-T
i Eulemur_albifrons.k141_715837                         I 1 C 0
s Eulemur_collaris.k141_311830                               1538  6 -      6809 A--------AA-A-T-T
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             8009  6 +     36558 A--------AA-A-T-T
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             4326  6 +     60246 A--------AA-A-T-T
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 7814  6 +    109717 A--------AA-A-T-T
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               12188  6 +     16540 A--------AA-A-T-T
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                12465  6 +     27497 A--------AA-A-T-T
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           14921  6 +     26808 A--------AA-A-A-T
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                29655  6 +     46535 A--------AA-A-T-T
i Eulemur_rufus.k141_1620292                            I 1 C 0
s Eulemur_sanfordi.k141_186399                              12378  6 -     29447 A--------AA-A-T-T
i Eulemur_sanfordi.k141_186399                          I 1 C 0
s Felis_catus.CM001386.2                                129889406  7 - 159252932 a--------aa-a-att
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129276480  7 - 158578461 a--------aa-a-att
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 17615  7 +     52776 A--------AA-A-ATT
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13889605 14 -  19261668 aaaaatttcta-a-c-T
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     207550  6 -    847004 A--------AA-A-T-T
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                            9930  6 -     43889 A--------AA-A-T-T
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           6979  6 +     27357 A--------AA-A-T-T
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               152864  6 +    324696 A--------CA-A-T-T
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    178079  6 -    189561 A--------GA-A-T-T
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                            9277  2 -     18683 --------------T-T
i Glis_glis.GliGli_scaffold_79770                       I 4 C 0
s Gorilla_beringei.k141_111300                               1726  6 -     14630 A--------AA-A-T-T
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119648824  6 - 195582420 A--------AA-A-T-T
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   73834  2 +    118900 --------------T-T
i Graphiurus_murinus.GraMur_scaffold_4493               I 4 C 0
s Hapalemur_alaotrensis.k141_1198205                         2149  6 +      3980 A--------AA-A-T-T
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             24629  6 +     26611 A--------AA-A-T-T
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             2083  6 +     56096 A--------AA-A-T-T
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        25356  6 -     42470 A--------AA-A-T-T
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        41953  6 -     54384 A--------AA-A-T-T
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              13657  7 +     53719 A--------AA-T-TTT
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                24433  6 -     91191 A--------GA-A-T-T
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2547716 14 +  31725842 aaatatttcta-a-t-t
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               53134  6 +     73687 A--------AT-T-T-T
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              144142  6 +    277961 A--------GA-A-T-T
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      275562  6 -    477199 a--------aa-a-t-t
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              4716  6 -      9143 A--------AA-A-T-T
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg649                                    98398  6 +    115816 A--------AA-G-T-T
i Hoolock_leuconedys.ctg649                                C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 12725  7 -     67322 A--------AA-G-TTT
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hylobates_abbotti.k141_493872                              1535  6 +      5897 A--------AA-G-T-T
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_282275                                748  6 +      1846 A--------AA-G-T-T
i Hylobates_agilis.k141_282275                          C 0 C 0
s Hylobates_klossii.k141_466549                              7993  6 +     11537 A--------AA-G-T-T
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_muelleri.k141_1133650                             970  6 -      2775 A--------AA-G-T-T
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             29572  6 -     60944 A--------AA-G-T-T
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     2686 14 +     22540 AAATATTTCTG-A-T-T
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7122379  2 +  13083262 --------------t-t
i Ictidomys_tridecemlineatus.JH393315.1                 I 4 C 0
s Indri_indri.k141_3334527                                   8593  6 +      9207 A--------AA-A-T-T
i Indri_indri.k141_3334527                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               5799  6 +     17520 A--------GA-A-T-T
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               20631  6 +     37189 A--------GG-A-T-T
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          46450  6 -    147782 A--------AA-A-T-T
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   110745  5 -    115756 ---------AA-A-T-T
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258403632  6 - 285822530 A--------AA-A-T-T
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        20526  6 +     39228 A--------AA-A-T-T
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            49902  6 +     63517 A--------AA-A-T-T
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        75122  6 +    116806 A--------AA-A-T-T
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     28163  6 -     33031 A--------AA-A-T-T
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3082428  7 -   3498232 A--------GA-A-TTT
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lipotes_vexillifer.KE558548.1                            132974  6 +   3060487 A--------CA-A-C-T
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19244238  6 +  19376315 A--------AA-A-T-T
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            7279  6 +     84689 A--------AG-A-T-T
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3775030  6 +   6799190 A--------AG-A-T-T
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20587708  6 -  62548349 a--------at-a-t-t
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11083788  7 +  39895028 A--------GA-A-TTT
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             15924  6 +     74745 A--------AA-A-T-T
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12702430  6 +  12821369 A--------AA-A-T-T
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               4523  6 +      6569 A--------AA-A-T-T
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           42823  6 +     63263 A--------AA-A-T-T
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_1068107                               11400  6 +     12679 A--------AA-A-T-T
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                 973  6 +      3017 A--------AA-A-T-T
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  42585  6 -     79256 A--------AA-A-T-T
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196031505  6 + 196197964 a--------aa-a-t-t
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11441609  6 +  11645122 a--------aa-a-t-t
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   1535  6 -     46448 A--------AA-A-T-T
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                1362  6 -      3617 A--------AA-A-T-T
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 11695  6 -     55006 A--------AA-A-T-T
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43836734  6 +  43892939 A--------AA-A-T-T
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                3957  6 -      5978 A--------AA-A-T-T
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               1537  6 -     27140 A--------AA-A-T-T
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43433398  6 -  43563597 A--------AA-A-T-T
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4446224  6 -   4543643 A--------AA-A-T-T
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            143041  6 +    252755 A--------GA-A-T-T
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             33105  6 +     58827 A--------GA-A-T-T
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36870226  2 +  64221397 --------------t-t
i Marmota_marmota.CZRN01000005.1                        I 4 C 0
s Mellivora_capensis.MelCap_flattened_line_1828            224785  7 -    226874 A--------GA-A-TTT
i Mellivora_capensis.MelCap_flattened_line_1828         C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1043049  2 -  26018355 --------------T-T
i Mesocricetus_auratus.KB708139.1                       I 4 C 0
s Mesoplodon_bidens.MesBid_scaffold_183284                    670  6 +      2166 A--------GA-A-T-T
i Mesoplodon_bidens.MesBid_scaffold_183284              C 0 C 0
s Microcebus_murinus.CM007691.1                          16506747  6 +  47401472 a--------aa-a-t-t
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  28084  6 -     48017 A--------AG-A-T-T
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               19717  6 -     32043 A--------AA-A-T-T
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22815438  2 -  98408828 --------------T-T
i Microtus_ochrogaster.CM001673.1                       I 4 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8206438  4 +  10048721 ----------A-T-T-T
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            31119  4 +     45743 ----------A-T-T-T
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        32072  6 +     34273 A--------AA-A-T-T
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         7726  7 -    104932 A--------GA-A-TTT
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     2161  6 +      8497 A--------AA-A-T-T
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 143397  6 +    154973 A--------GA-A-T-T
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                158037  6 +    265003 A--------AA-A-T-T
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 1664  6 -      4346 A--------GA-A-T-T
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  141347  7 -    168139 A--------AA-T-TTC
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          16253  6 -    100666 ---------AACA-T-T
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70761797  2 +  92629107 --------------T-T
i Mus_caroli.LT608236.1                                 I 4 C 0
s Mus_musculus.chr16                                     75484919  2 +  98207768 --------------T-T
i Mus_musculus.chr16                                    I 4 C 0
s Mus_pahari.LT608305.1                                  67549235  2 +  89017189 --------------T-T
i Mus_pahari.LT608305.1                                 I 4 C 0
s Mus_spretus.CM004110.1                                 74324338  2 +  97876770 --------------T-T
i Mus_spretus.CM004110.1                                I 4 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              7788  2 +     98495 --------------T-T
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 4 C 0
s Mustela_putorius.JH417978.1                             4419662  6 -  28371801 ---------GA-A-TTT
i Mustela_putorius.JH417978.1                           I 1 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     86757  5 -    117718 ---------TA-C-T-G
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 2 C 0
s Myotis_brandtii.KE161952.1                               964580  6 +   8389877 ---------aaaa-t-t
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5016257  6 +   6462685 ---------aaaa-t-t
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3462166  6 -   3747815 ---------aaaa-t-t
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         7363  6 +     66751 ---------AAAA-T-T
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             2118  6 -      8794 A--------AG-A-T-T
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            107431 14 +    362372 aaaaaatccta-a-g-a
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               4437  6 +     48152 A--------AA-A-T-T
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4481327  7 -  14209539 A--------GA-A-TTT
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3948006  6 -   4490290 A--------GA-A-T-T
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  46367  6 +     94413 A--------AA-A-T-T
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1223136                          10204  6 -     11253 A--------AA-G-T-T
i Nomascus_annamensis.k141_1223136                      C 0 C 0
s Nomascus_concolor.k141_468488                               847  6 -      1482 A--------AA-G-T-T
i Nomascus_concolor.k141_468488                         C 0 C 0
s Nomascus_gabriellae.k141_906566                             836  6 -      2544 A--------AA-G-T-T
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             21310  6 -  18771707 A--------AA-G-T-T
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_844529                                   585  6 +      2124 A--------AA-G-T-T
i Nomascus_siki_a.k141_844529                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                26784  7 +   3668941 A--------GA-A-TTT
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65563609  6 -  95554990 A--------AA-A-T-T
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                             454  6 +      6470 A--------AA-A-T-T
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65665978  6 +  89412551 A--------AA-A-T-T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Octodon_degus.JH651621.1                                3675487  5 +  10294119 ---------TA-G-T-G
i Octodon_degus.JH651621.1                              I 327 C 0
s Odobenus_rosmarus.KB229369.1                             675985  7 -   3126709 A--------GA-A-TTT
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1076789  6 +   1425656 a--------ga-a-t-t
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         33951  6 +     78940 A--------GA-A-T-T
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  121261  2 +    145789 --------------T-T
i Ondatra_zibethicus.OndZib_scaffold_6821               I 4 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  33212  2 +     62360 --------------T-T
i Onychomys_torridus.OnyTor_scaffold_12578              I 4 C 0
s Orcinus_orca.KB316965.1                                 7221690  6 -   7562323 A--------GA-A-T-T
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              39943  6 -     66828 A--------GG-A-T-T
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      304119  7 -    505867 a--------ga-a-ttt
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       35618  6 +     38679 A--------AA-A-T-T
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18005059  6 -  38779656 a--------ga-a-t-t
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134074235  6 - 275406953 A--------GA-A-T-T
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      75449  6 +    140051 A--------GA-A-T-T
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127571068  6 - 205426864 A--------AA-A-T-T
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120148215  6 - 196562556 A--------AA-A-T-T
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  30569  7 +    295523 A--------AA-A-ATT
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3634173  7 +  18214204 a--------aa-a-att
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5023950  7 -   6340057 a--------aa-a-att
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1062950  6 -   1292953 A--------GA-A-T-T
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188152183  6 - 188283584 a--------aa-a-t-t
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            48395  6 +     76494 A--------AA-A-T-T
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47509579  6 +  47705337 A--------AA-A-T-T
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 63562  6 -    104429 A--------AA-A-T-T
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  13346  6 -     29451 A--------AA-A-T-T
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                33751  6 +     35859 A--------AA-A-T-T
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    111901  7 -    135482 A--------AA-A-TTT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           1846  6 -     23713 A--------AA-A-T-T
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            21143  6 -     27972 A--------AA-A-T-T
i Perodicticus_potto.k141_713187                        C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4946384  2 -   8017169 --------------T-T
i Peromyscus_maniculatus.KI615518.1                     I 4 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      39704  1 -     45160 A----------------
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 I 3
s Phocoena_phocoena.PhoPho_flattened_line_11948            118307  6 -    122454 A--------GA-A-T-T
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           1438  6 -      3310 A--------AA-A-T-T
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       21344  6 -     82327 A--------AA-A-T-T
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           18095  6 +     19957 A--------AA-A-T-T
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26736104  6 +  26888534 a--------aa-a-t-t
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            93352  6 +    112873 ---------AA-AAT-T
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             39950  6 -     61926 A--------AA-A-T-T
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        21379  6 +     78826 A--------AA-A-T-T
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              5330  6 -     15800 A--------AA-A-T-T
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                         8528  6 -     16101 A--------AA-A-T-T
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          1837  6 +      9673 A--------AA-A-T-T
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13470831  6 -  19735023 A--------AA-A-T-T
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                            9739  6 -     31692 A--------AA-A-T-T
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           2374  6 +     21690 A--------GA-A-T-T
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       19131  6 +     44506 A--------AA-A-T-T
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        19349  6 +     67491 A--------AA-A-T-T
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                       9594  6 -     98129 A--------AA-A-T-T
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     19194  6 +    147771 A--------AA-A-T-T
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        19445  6 -     23762 A--------AA-A-T-T
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_2078842                         19393  6 -     19696 A--------AA-A-T-T
i Plecturocebus_dubius.k141_2078842                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         19267  6 +    152463 A--------AA-A-T-T
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      6024  6 +      8943 A--------AA-A-T-T
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                          8984  6 +    134592 A--------AA-A-T-T
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          19577  6 -     75465 A--------AA-A-T-T
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              183621  6 -    373494 A--------AA-A-T-T
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19803525  6 +  19899266 A--------AA-A-T-T
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               1674  6 -     15069 A--------AA-A-T-T
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              1808  6 +     14865 A--------AA-A-T-T
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                72998  6 +     78963 A--------AT-T-T-T
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6845005  6 +  12164890 a--------aa-a-t-t
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     13440  6 -     30946 a--------aa-a-t-t
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                           13  1 +     11805 ----------------T
i Propithecus_coronatus.k141_1353159                    I 1 C 0
s Propithecus_diadema.k141_577245                           39475  6 +     52369 A--------AA-A-T-T
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         31864  6 -     44753 A--------AA-A-T-T
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            13786  6 +     27322 A--------AA-A-T-T
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       13430  6 -     53241 A--------AA-A-T-T
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         35701  6 -     48185 A--------AA-A-T-T
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           29220  2 +     77221 --------------T-T
i Psammomys_obesus.NESX01026517.1                       I 4 C 0
s Pteronotus_parnellii.KE867983.1                             928  6 -     27784 a--------aa-a-t-t
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        241520  7 -    344369 A--------GA-A-TTT
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13243044  6 -  17261082 a--------aa-a-t-t
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             600998  6 -   3946241 a--------aa-a-t-t
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131530766  7 - 161321710 a--------aa-a-att
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             25799  6 +     56732 A--------AA-A-T-T
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6802289  6 +   6970761 A--------AA-A-T-T
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             1681  6 +     18040 A--------AA-A-T-T
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                12875  6 +     68503 A--------GA-A-T-T
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13911162  2 +  90463843 --------------T-T
i Rattus_norvegicus.chr11                               I 4 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1784645  6 +   2252614 a--------aa-a-t-t
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           12236  6 -     14454 A--------AA-A-T-T
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206373562  6 - 206558726 a--------aa-a-t-t
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44851210  6 -  45163003 A--------AA-A-T-T
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                16347  6 +    109198 A--------AA-A-T-T
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       4521  6 +     12214 A--------GA-A-T-T
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15669002  6 -  43202129 a--------aa-a-t-t
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                         877  6 +     34089 A--------AA-A-T-T
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                               808  6 -     60842 A--------AA-A-T-T
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                               877  6 +     67014 A--------AA-A-T-T
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                               877  6 +     60816 A--------AA-A-T-T
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                  805  6 -     76454 A--------AA-A-T-T
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17337385  6 -  30362882 A--------AA-A-T-T
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         16986  6 -     62485 A--------AA-A-T-T
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   28421  6 -    114521 G--------GA-C-T-T
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1527475                       24224  6 +     26421 A--------AA-A-T-T
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       4686  6 +     20762 A--------AA-A-T-C
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         38419  6 +     40653 A--------AA-A-T-T
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                            8978  6 -     12194 A--------AA-A-T-T
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     22397  6 -     27512 A--------AA-A-T-T
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         31418  6 -     33692 A--------AA-A-T-T
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   94450  2 -    120886 --------------A-T
i Sigmodon_hispidus.SigHis_scaffold_11332               I 4 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            14643  6 +    739146 A--------GA-A-T-T
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2236305  2 +   2842873 --------------t-t
i Spermophilus_dauricus.KZ294190.1                      I 4 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             231230  7 -    276980 A--------GA-A-TTT
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            24014  7 +     62062 A--------AA-T-TTT
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189268942  6 + 218635234 A--------GA-A-T-T
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                     13898348  6 +  13920577 A--------AA-G-T-T
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_148405               2677  6 -      6063 A--------AA-A-T-T
i Tadarida_brasiliensis.TadBra_scaffold_148405          I 7 I 59
s Tamandua_tetradactyla.TamTet_scaffold_26877               11796  6 +     45698 A--------AG-A-T-T
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      803796  4 +   1148477 A--------GA-A----
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  54458  4 +     99546 A--------GA-A----
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               23136  6 +     42269 A--------AA-A-T-T
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               56450  6 +     65473 A--------AA-A-T-T
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194003718  6 - 194193292 a--------aa-a-t-t
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                   662  6 +      6782 A--------AG-A-T-T
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  132934  6 -    259118 A--------AA-A-T-T
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        22796  6 +     38948 A--------AA-A-T-T
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   16523  6 -     32910 A--------AA-A-T-T
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       22421  6 +     24652 A--------AA-A-T-T
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      1306  6 -      3559 A--------AA-A-T-T
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           39245  6 -     54611 A--------AA-A-T-T
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       15244  6 +     17312 A--------AA-A-T-T
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    22614  6 -     25040 A--------AA-A-T-T
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          1280  6 +      3528 A--------AA-A-T-T
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  47642  6 +     51589 A--------AA-A-T-T
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       10810  6 +     14732 A--------AA-A-T-T
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       1288  6 -     28054 A--------AA-A-T-T
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44656083  6 -  44834318 A--------AA-A-T-T
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        1093  6 +      3372 A--------AA-A-T-T
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   2284  6 +     90398 A--------GA-A-T-T
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16078383  6 +  31416278 A--------AT-A-T-T
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2787951  6 -   3938065 A--------AA-A-T-T
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                     511  6 +     13056 A--------AA-A-T-T
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69310408  6 -  96451834 A--------GA-A-T-T
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 23608  6 -     25548 A--------GG-C-T-T
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6511035  7 +  28682327 A--------GA-A-TTT
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  1948  6 -     20643 A--------AA-A-T-T
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             21493  6 -     33872 A--------AA-A-T-T
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1521727  6 -   2331223 A--------GA-A-T-T
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                134189  7 -    281493 A--------GA-A-TTT
i Vulpes_lagopus.VulLag_flattened_line_2045             I 5 C 0
s Xerus_inauris.XerIna_scaffold_7898                       123502  2 -    134049 --------------T-T
i Xerus_inauris.XerIna_scaffold_7898                    I 4 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        210713  7 -    227762 A--------GA-A-TTT
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           3911  6 -      8775 A--------GA-A-T-T
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_141308              5625 53 -     12508 M
e Megaderma_lyra.MegLyr_scaffold_3562                       61508  0 -    234502 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16291  1 -    119109 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     12283  2 -     20485 I
e Jaculus_jaculus.JH725517.1                              8561873  2 +  11848649 I
e Hylobates_pileatus_b.LG03                                     92553610  0 - 189753342 C
e Allactaga_bullata.AllBul_scaffold_70162                    8911  2 -     22067 I
e Meriones_unguiculatus.MerUng_scaffold_52233                8154  0 +     15977 C
e Dolichotis_patagonum.DolPat_scaffold_14102                33375  0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             56104 16 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                14631 16 +     26546 I
e Cricetulus_griseus.LT883672.1                          53025429  0 +  72327488 C
e Cavia_tschudii.CavTsc_scaffold_488                       173989  0 +    436027 C
e Cavia_porcellus.DS562889.1                             15795798  0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15783848 16 -  24422027 I
e Arctocebus_calabarensis.k141_1161114                      14526 30 +     17483 I

a score=0.000000
s hg38.chr4_GL000008v2_random                                8339 4 +    209709 TGAA
s Acinonyx_jubatus.LLWD01000356.1                         2030433 4 +   3721120 taaa
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    108697 4 -    189883 TGAA
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10653767 4 +  23371972 TGAA
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7090468 4 -  16596857 TGGA
i Ailurus_fulgens.LNAC01000003.1                        I 1 C 0
s Allenopithecus_nigroviridis.k141_3103707                  59362 4 +     61638 TGAA
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        51170 4 +     53391 TGAA
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         1894 4 +     72529 TGAA
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          1470 4 +      3797 TGAA
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             6563 4 -     18050 TGAA
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  7680 4 -     11521 TGAA
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              7238 4 -     21359 TGAA
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1856473                                5621 4 +      7227 TGAA
i Alouatta_juara.k141_1856473                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          6535 4 -     10438 TGAA
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            3190 4 +      7047 TGAA
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             6474 4 +     10410 TGAA
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1374428                             277 4 -     25526 TGAA
i Alouatta_puruensis.k141_1374428                       C 0 C 0
s Alouatta_seniculus.k141_990213                             3195 4 +      6429 TGAA
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3516927 4 +   4113121 TGAA
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      387387 4 -    631301 TGAA
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            27835 4 +     33004 TGAA
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 58869 4 +     78111 TGAA
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            1800 4 +     22701 TGAA
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5745760 4 +   9889416 tgaa
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             2352 4 -    104377 TGAA
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               2352 4 +     23246 TGAA
i Aotus_vociferans.k141_718647                          C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 5486 4 -     29036 TGAA
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9535613 4 +  39197703 TGAA
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             56901 4 +     85812 TGAA
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 7898 4 +     89302 TGAA
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             12407 4 -     58268 TGAA
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             60395 4 +    119057 TGAA
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               2345 4 -     25888 TGAA
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 3201 4 -     16375 CGAA
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_767228                               9173 4 -      9688 CGAA
i Avahi_peyrierasi.k141_767228                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26377139 4 +  51448160 TGAA
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        2370 4 -     13118 TGAA
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   40027 4 -     72089 TGAA
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6556449 4 +   6870073 TGAA
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138136680 4 - 161108492 TGAA
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     569058 4 -    998990 TGAA
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136292413 4 - 158972876 TGAA
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1228034 4 -   1914593 TGAA
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               110243 4 -    171031 TGAA
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                  9269 4 +    125063 TGAA
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                11317 4 -    216513 TGAA
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        3856 4 -    134917 TGAA
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3216171 4 -   8989139 TGAA
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           394355 4 -  15254737 TGAA
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2970092 4 +   6889770 TGAA
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11515151 4 +  39901454 TGAA
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   10168 4 +     87036 TGAA
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11261810 4 -  35597290 TGAA
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11084339 4 +  39895921 TGAA
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16451373 4 -  44759192 TGAA
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21322034 4 + 157394656 TGAA
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135703261 4 - 157403528 TGAA
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_647363                  1069 4 +      1887 aaaa
i Capromys_pilorides.CapPil_scaffold_647363             C 0 C 0
s Carlito_syrichta.NW_007248099.1                          305652 4 +    345090 TGAA
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               56564 4 +     67245 TAAA
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   27082 4 +     33760 TAAA
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   155885 4 -    276539 TGAA
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18887082 4 -  29618158 TGAG
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 4628 4 -     26817 TGAG
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                 8868 4 +     25043 TGAG
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         4701 4 +     21754 TGAA
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4360351 4 +   7569818 TGAA
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_520758          353 4 -       446 TGAA
i Ceratotherium_simum_cottoni.CerCot_scaffold_520758    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6551158 4 +   6739814 tgAA
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      52635 4 -     54931 TGAA
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         17619 4 -     19697 TGAA
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         55150 4 -    107033 TGAA
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        1593 4 -      3853 TGAA
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          25525 4 +     30494 TGAA
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           1548 4 -      4022 TGAA
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          1440 4 -      3505 TGAA
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           20246 4 +     35983 TGAA
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11986768 4 +  12117833 TGAA
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46473521 4 +  46592721 TGAA
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      31348 4 +     33420 TGAA
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        1384 4 -      3443 TGAA
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      2375 4 -      4669 TGAA
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        2176 4 -      4411 TGAA
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         1699 4 -      4205 TGAA
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           55537 4 -     68416 CAAA
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            4586 4 +     13308 CGAA
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             1881 4 -     18223 TGAA
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             18904 4 +     25473 TGAA
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           37943 4 +     57117 TGAA
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          42618 4 +     54541 TGAA
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15958035 4 +  43084221 aaaa
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         67464 4 +    196370 TGAA
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          11638 4 +     40510 TGAA
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15134979 4 -  15256731 TGAA
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      30025 4 -     53260 TGAA
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101140473 4 + 101219884 tgaa
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                13564 4 -     21363 TTAA
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           758870 4 +    964067 TAAA
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10879055 4 +  10971483 tgaA
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147660214 4 + 156195979 TGAA
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            12199 4 +     23629 TGAA
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60609831 4 +  78930452 CTAA
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         36270 4 -     40477 TGAA
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 274139 4 -    399297 TGAA
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             15784 4 -     19186 TGAC
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            48460 4 -     70449 TGAA
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  204871 4 -    956709 AAAA
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 27146 4 -     67205 AATA
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          178739 4 -   6883506 TGAA
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16841411 4 +  31942871 TGAA
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80033878 4 -  96802777 TGAA
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18695874 4 -  18957592 tgaa
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 319008 4 +    993696 TGAA
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_170113                  271 4 +       818 TGAA
i Diceros_bicornis.DicBicMic_scaffold_170113            C 0 C 0
s Echinops_telfairi.JH980316.1                           22991148 4 -  44670279 TAAG
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                  9257 4 +     24177 tgaa
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1488572 4 +   1727528 TGAA
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7803298 4 +  15467074 agaa
i Elephantulus_edwardii.JH947210.1                      C 0 I 7
s Ellobius_lutescens.LOEQ01003611.1                        235785 4 -    369425 TGAA
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           2793 4 -      7838 TGAA
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85867259 4 +  99434291 TGAA
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Equus_asinus.JREZ01000062.1                             5849738 4 -   7175178 tgaa
i Equus_asinus.JREZ01000062.1                           N 0 C 0
s Equus_caballus.CM000402.2                              13348241 4 +  41866177 tGAA
i Equus_caballus.CM000402.2                             I 1963 C 0
s Equus_przewalskii.ATBW01073585.1                           9731 4 +     92910 tGAA
i Equus_przewalskii.ATBW01073585.1                      I 1461 C 0
s Erythrocebus_patas.Contig8                             48767158 4 -  48907691 TGAA
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          312023 4 +    330699 TGAA
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             58452 4 +     89355 TGAA
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              1608 4 +     13586 CGAA
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               1544 4 -      6809 CGAA
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             8015 4 +     36558 CGAA
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             4332 4 +     60246 CAAA
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 7820 4 +    109717 CGAA
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               12194 4 +     16540 CAAA
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                12471 4 +     27497 CGAA
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           14927 4 +     26808 CAAA
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                29661 4 +     46535 CGAA
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              12384 4 -     29447 TGAA
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129889413 4 - 159252932 taaa
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129276487 4 - 158578461 taaa
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 17622 4 +     52776 TAAA
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13889619 4 -  19261668 AAAG
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     207556 4 -    847004 TGAA
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                            9936 4 -     43889 TGAA
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           6985 4 +     27357 TGAA
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               152870 4 +    324696 TGAA
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    178085 4 -    189561 CTAG
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                            9279 4 -     18683 TGGA
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               1732 4 -     14630 TGAA
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119648830 4 - 195582420 TGAA
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   73836 4 +    118900 TGGA
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                         2155 4 +      3980 CGAA
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             24635 4 +     26611 CAAA
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             2089 4 +     56096 CAAA
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        25362 4 -     42470 CGAA
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        41959 4 -     54384 CGAA
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              13664 4 +     53719 TGAA
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                24439 4 -     91191 TGAA
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2547730 4 +  31725842 aaag
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               53140 4 +     73687 TCAA
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              144148 4 +    277961 TGAA
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      275568 4 -    477199 tgaa
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              4722 4 -      9143 TGAA
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg649                                    98404 4 +    115816 TGAA
i Hoolock_leuconedys.ctg649                                C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 12732 4 -     67322 TGAA
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hylobates_abbotti.k141_493872                              1541 4 +      5897 TGAA
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_282275                                754 4 +      1846 TGAA
i Hylobates_agilis.k141_282275                          C 0 C 0
s Hylobates_klossii.k141_466549                              7999 4 +     11537 TGAA
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_muelleri.k141_1133650                             976 4 -      2775 TGAA
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             29578 4 -     60944 TGAA
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     2700 4 +     22540 AAAA
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7122381 4 +  13083262 tgaA
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_3334527                                   8599 4 +      9207 CAAA
i Indri_indri.k141_3334527                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               5805 4 +     17520 TGAA
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               20637 4 +     37189 TGAA
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          46456 4 -    147782 TGAA
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   110750 4 -    115756 TTAA
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258403638 4 - 285822530 CGAA
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        20532 4 +     39228 CAAA
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            49908 4 +     63517 CAAA
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        75128 4 +    116806 CAAA
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     28169 4 -     33031 CAAA
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3082435 4 -   3498232 TGAA
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lipotes_vexillifer.KE558548.1                            132980 4 +   3060487 TGAA
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19244244 4 +  19376315 TGAA
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            7285 4 +     84689 TGAA
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3775036 4 +   6799190 TGAA
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20587714 4 -  62548349 ttaa
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11083795 4 +  39895028 TGAA
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             15930 4 +     74745 TGAA
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12702436 4 +  12821369 TGAA
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               4529 4 +      6569 TGAA
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           42829 4 +     63263 TGAA
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_1068107                               11406 4 +     12679 TGAA
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                 979 4 +      3017 TGAA
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  42591 4 -     79256 TGAA
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196031511 4 + 196197964 tgaA
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11441615 4 +  11645122 tgaa
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   1541 4 -     46448 TGAA
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                1368 4 -      3617 TGAA
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 11701 4 -     55006 TGAA
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43836740 4 +  43892939 TGAA
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                3963 4 -      5978 TGAA
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               1543 4 -     27140 TGAA
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43433404 4 -  43563597 TGAA
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4446230 4 -   4543643 TGAA
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            143047 4 +    252755 TGAA
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             33111 4 +     58827 TGAA
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36870228 4 +  64221397 tgaa
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_1828            224792 4 -    226874 TGAA
i Mellivora_capensis.MelCap_flattened_line_1828         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233                8154 3 +     15977 -TTA
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1043051 4 -  26018355 TTAA
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_183284                    676 4 +      2166 TGAA
i Mesoplodon_bidens.MesBid_scaffold_183284              C 0 C 0
s Microcebus_murinus.CM007691.1                          16506753 4 +  47401472 cgAA
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  28090 4 -     48017 TAAA
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               19723 4 -     32043 TGAA
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22815440 4 -  98408828 TGCA
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8206442 4 +  10048721 TGAA
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            31123 4 +     45743 TGAA
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        32078 4 +     34273 TGAA
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         7733 4 -    104932 TGAA
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     2167 4 +      8497 TGAA
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 143403 4 +    154973 TGAA
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                158043 4 +    265003 TGAA
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 1670 4 -      4346 TGAA
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  141354 4 -    168139 TGAA
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          16259 4 -    100666 TGAA
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70761799 4 +  92629107 TTAA
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75484921 4 +  98207768 TTAA
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67549237 4 +  89017189 TTAA
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74324340 4 +  97876770 TTAA
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              7790 4 +     98495 TGGA
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4419668 4 -  28371801 TGAA
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     86762 4 -    117718 AAAA
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               964586 4 +   8389877 tgaa
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5016263 4 +   6462685 tgaa
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3462172 4 -   3747815 tgaA
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         7369 4 +     66751 TGAA
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             2124 4 -      8794 TGAG
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            107445 4 +    362372 aaaa
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               4443 4 +     48152 TGAA
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4481334 4 -  14209539 TGAA
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3948012 4 -   4490290 TGAA
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  46373 4 +     94413 TGAA
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1223136                          10210 4 -     11253 TGAA
i Nomascus_annamensis.k141_1223136                      C 0 C 0
s Nomascus_concolor.k141_468488                               853 4 -      1482 TGAA
i Nomascus_concolor.k141_468488                         C 0 C 0
s Nomascus_gabriellae.k141_906566                             842 4 -      2544 TGAA
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             21316 4 -  18771707 TGAA
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_844529                                   591 4 +      2124 TGAA
i Nomascus_siki_a.k141_844529                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                26791 4 +   3668941 TGGA
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65563615 4 -  95554990 TGAA
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                             460 4 +      6470 TGAA
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65665984 4 +  89412551 TGAA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Octodon_degus.JH651621.1                                3675492 4 +  10294119 AAAA
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             675992 4 -   3126709 TGAA
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1076795 4 +   1425656 tgaa
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         33957 4 +     78940 CTAG
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  121263 4 +    145789 TGAA
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  33214 4 +     62360 CGAA
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7221696 4 -   7562323 TGAA
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              39949 4 -     66828 TCAA
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      304126 4 -    505867 taaa
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       35624 4 +     38679 TGAA
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18005065 4 -  38779656 tgaa
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134074241 4 - 275406953 TGAA
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      75455 4 +    140051 TGAA
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127571074 4 - 205426864 TGAA
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120148221 4 - 196562556 TGAA
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  30576 4 +    295523 TAAA
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3634180 4 +  18214204 taaa
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5023957 4 -   6340057 taaa
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1062956 4 -   1292953 TGAA
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188152189 4 - 188283584 tgaA
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            48401 4 +     76494 TGAA
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47509585 4 +  47705337 TGAA
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 63568 4 -    104429 TGAA
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  13352 4 -     29451 TGAA
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                33757 4 +     35859 TGAA
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    111908 4 -    135482 TGAA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           1852 4 -     23713 TGAA
i Perodicticus_ibeanus.k141_117958                      C 0 I 4
s Perodicticus_potto.k141_713187                            21149 4 -     27972 TGAA
i Perodicticus_potto.k141_713187                        C 0 I 4
s Peromyscus_maniculatus.KI615518.1                       4946386 4 -   8017169 TGAA
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            118313 4 -    122454 TGAA
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           1444 4 -      3310 TGAA
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       21350 4 -     82327 TGAA
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           18101 4 +     19957 TGAA
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26736110 4 +  26888534 tgaA
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            93358 4 +    112873 TAAA
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             39956 4 -     61926 TGAA
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        21385 4 +     78826 TGAA
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              5336 4 -     15800 TGAA
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                         8534 4 -     16101 TGAA
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          1843 4 +      9673 TGAA
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13470837 4 -  19735023 TGAA
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                            9745 4 -     31692 TGAA
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           2380 4 +     21690 TGAA
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       19137 4 +     44506 TGAA
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        19355 4 +     67491 TGAA
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                       9600 4 -     98129 TGAA
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     19200 4 +    147771 TGAA
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        19451 4 -     23762 TGAA
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_2078842                         19399 4 -     19696 TGAA
i Plecturocebus_dubius.k141_2078842                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         19273 4 +    152463 TGAA
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      6030 4 +      8943 TGAA
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                          8990 4 +    134592 TGAA
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          19583 4 -     75465 TGAA
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              183627 4 -    373494 TGAA
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19803531 4 +  19899266 TGAA
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               1680 4 -     15069 TGAA
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              1814 4 +     14865 TGAA
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                73004 4 +     78963 TCAA
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6845011 4 +  12164890 cgAA
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     13446 4 -     30946 tgAA
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                           14 4 +     11805 CCAA
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           39481 4 +     52369 CGAA
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         31870 4 -     44753 CGAA
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            13792 4 +     27322 CGAA
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       13436 4 -     53241 CGAA
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         35707 4 -     48185 TGAA
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           29222 4 +     77221 TGTA
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                             934 4 -     27784 caaa
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        241527 4 -    344369 TGAA
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13243050 4 -  17261082 tgaa
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             601004 4 -   3946241 tgaa
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131530773 4 - 161321710 taaa
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             25805 4 +     56732 TGAA
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6802295 4 +   6970761 TGAA
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             1687 4 +     18040 TGAA
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                12881 4 +     68503 TGAA
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13911164 4 +  90463843 TGAA
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1784651 4 +   2252614 tgaa
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           12242 4 -     14454 TGAA
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206373568 4 - 206558726 tgaA
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44851216 4 -  45163003 TGAA
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                16353 4 +    109198 TGAA
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       4527 4 +     12214 TGAA
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15669008 4 -  43202129 tgaG
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                         883 4 +     34089 TGAG
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                               814 4 -     60842 TGAG
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                               883 4 +     67014 TGAG
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                               883 4 +     60816 TGAG
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                  811 4 -     76454 TGAG
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17337391 4 -  30362882 TGAG
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         16992 4 -     62485 TGAG
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   28427 4 -    114521 TTTA
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1527475                       24230 4 +     26421 TGAA
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       4692 4 +     20762 TGAA
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         38425 4 +     40653 TGAA
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                            8984 4 -     12194 TGAA
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     22403 4 -     27512 TGAA
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         31424 4 -     33692 TGAA
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   94452 4 -    120886 TAAA
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            14649 4 +    739146 TGAA
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2236307 4 +   2842873 tgaA
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             231237 4 -    276980 TGAA
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            24021 4 +     62062 TGAA
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189268948 4 + 218635234 TGAA
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                     13898354 4 +  13920577 TGAA
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               2864 4 -      6213 TGAA
i Tadarida_brasiliensis.TadBra_scaffold_145589          I 6 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               11802 4 +     45698 TGAG
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      803800 4 +   1148477 TGAA
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  54462 4 +     99546 TGAA
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               23142 4 +     42269 CGAA
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               56456 4 +     65473 TGAA
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194003724 4 - 194193292 tgaA
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                   668 4 +      6782 TGAA
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  132940 4 -    259118 TGAA
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        22802 4 +     38948 TGAA
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   16529 4 -     32910 TGAA
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       22427 4 +     24652 TGAA
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      1312 4 -      3559 TGAA
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           39251 4 -     54611 TGAA
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       15250 4 +     17312 TGAA
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    22620 4 -     25040 TGAA
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          1286 4 +      3528 TGAA
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  47648 4 +     51589 TGAA
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       10816 4 +     14732 TGAA
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       1294 4 -     28054 TGAA
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44656089 4 -  44834318 TGAA
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        1099 4 +      3372 TGAA
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   2290 4 +     90398 TGAA
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16078389 4 +  31416278 TCAA
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2787957 4 -   3938065 GAAA
i Tupaia_chinensis.KB320831.1                           C 0 I 268
s Tupaia_tana.TupTan_flattened_line_68454                     517 4 +     13056 GAAA
i Tupaia_tana.TupTan_flattened_line_68454               C 0 I 269
s Tursiops_truncatus.MRVK01000923.1                      69310414 4 -  96451834 TGAA
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 23614 4 -     25548 TTAA
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6511042 4 +  28682327 TGAA
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  1954 4 -     20643 TGAA
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             21499 4 -     33872 TGAA
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1521733 4 -   2331223 TGAA
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                134196 4 -    281493 TGAA
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       123504 4 -    134049 TGAA
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        210720 4 -    227762 TGAA
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           3917 4 -      8775 TGAA
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Perognathus_longimembris.PerPac_flattened_line_22291      39705 3 -     45160 I
e Dipodomys_stephensi.DipSte_scaffold_44365                 23717 3 +     28912 I
e Dipodomys_ordii.KN672545.1                              3652163 3 +   4240102 I
e Chrysochloris_asiatica.ChrAsi_scaffold_141308              5625 53 -     12508 M
e Megaderma_lyra.MegLyr_scaffold_3562                       61508 0 -    234502 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16291 1 -    119109 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     12283 2 -     20485 I
e Jaculus_jaculus.JH725517.1                              8561873 2 +  11848649 I
e Hylobates_pileatus_b.LG03                                     92553610 0 - 189753342 C
e Allactaga_bullata.AllBul_scaffold_70162                    8911 2 -     22067 I
e Dolichotis_patagonum.DolPat_scaffold_14102                33375 0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             56104 16 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                14631 16 +     26546 I
e Cricetulus_griseus.LT883672.1                          53025429 0 +  72327488 C
e Cavia_tschudii.CavTsc_scaffold_488                       173989 0 +    436027 C
e Cavia_porcellus.DS562889.1                             15795798 0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15783848 16 -  24422027 I
e Arctocebus_calabarensis.k141_1161114                      14526 30 +     17483 I

a score=0.000000
s hg38.chr4_GL000008v2_random                                8343 1 +    209709 T
s Acinonyx_jubatus.LLWD01000356.1                         2030437 1 +   3721120 t
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    108701 1 -    189883 T
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10653771 1 +  23371972 T
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7090472 1 -  16596857 T
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allenopithecus_nigroviridis.k141_3103707                  59366 1 +     61638 T
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        51174 1 +     53391 T
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         1898 1 +     72529 T
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          1474 1 +      3797 T
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             6567 1 -     18050 T
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  7684 1 -     11521 T
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              7242 1 -     21359 T
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1856473                                5625 1 +      7227 T
i Alouatta_juara.k141_1856473                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          6539 1 -     10438 T
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            3194 1 +      7047 T
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             6478 1 +     10410 T
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1374428                             281 1 -     25526 T
i Alouatta_puruensis.k141_1374428                       C 0 C 0
s Alouatta_seniculus.k141_990213                             3199 1 +      6429 T
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3516931 1 +   4113121 T
i Ammotragus_lervia.NIVO01013474.1                      C 0 I 275
s Anoura_caudifer.AnoCau_scaffold_422                      387391 1 -    631301 T
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            27839 1 +     33004 T
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 58873 1 +     78111 T
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            1804 1 +     22701 T
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5745764 1 +   9889416 t
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             2356 1 -    104377 T
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               2356 1 +     23246 T
i Aotus_vociferans.k141_718647                          C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 5490 1 -     29036 T
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9535617 1 +  39197703 T
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             56905 1 +     85812 T
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 7902 1 +     89302 T
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             12411 1 -     58268 T
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             60399 1 +    119057 T
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               2349 1 -     25888 T
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 3205 1 -     16375 T
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_767228                               9177 1 -      9688 T
i Avahi_peyrierasi.k141_767228                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26377143 1 +  51448160 T
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        2374 1 -     13118 T
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   40031 1 -     72089 T
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 I 275
s Bison_bison.KN264915.1                                  6556453 1 +   6870073 T
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138136684 1 - 161108492 T
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     569062 1 -    998990 T
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136292417 1 - 158972876 T
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1228038 1 -   1914593 T
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               110247 1 -    171031 T
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                  9273 1 +    125063 T
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                11321 1 -    216513 T
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        3860 1 -    134917 T
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3216175 1 -   8989139 T
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           394359 1 -  15254737 T
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2970096 1 +   6889770 T
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11515155 1 +  39901454 T
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   10172 1 +     87036 T
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11261814 1 -  35597290 T
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11084343 1 +  39895921 T
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16451377 1 -  44759192 T
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21322038 1 + 157394656 T
i Capra_aegagrus.CM003214.1                             C 0 I 275
s Capra_hircus.CM004562.1                               135703265 1 - 157403528 T
i Capra_hircus.CM004562.1                               C 0 I 275
s Capromys_pilorides.CapPil_scaffold_647363                  1073 1 +      1887 t
i Capromys_pilorides.CapPil_scaffold_647363             C 0 C 0
s Carlito_syrichta.NW_007248099.1                          305656 1 +    345090 T
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               56568 1 +     67245 T
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   27086 1 +     33760 T
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   155889 1 -    276539 T
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18887086 1 -  29618158 T
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 4632 1 -     26817 T
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                 8872 1 +     25043 T
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         4705 1 +     21754 T
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4360355 1 +   7569818 T
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_520758          357 1 -       446 T
i Ceratotherium_simum_cottoni.CerCot_scaffold_520758    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6551162 1 +   6739814 T
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      52639 1 -     54931 T
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         17623 1 -     19697 T
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         55154 1 -    107033 T
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        1597 1 -      3853 T
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          25529 1 +     30494 T
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           1552 1 -      4022 T
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          1444 1 -      3505 T
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           20250 1 +     35983 T
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11986772 1 +  12117833 T
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46473525 1 +  46592721 T
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      31352 1 +     33420 T
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        1388 1 -      3443 T
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      2379 1 -      4669 T
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        2180 1 -      4411 T
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         1703 1 -      4205 T
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           55541 1 -     68416 T
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            4590 1 +     13308 T
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             1885 1 -     18223 T
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             18908 1 +     25473 T
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           37947 1 +     57117 T
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          42622 1 +     54541 T
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15958039 1 +  43084221 t
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         67468 1 +    196370 T
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          11642 1 +     40510 T
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15134983 1 -  15256731 T
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      30029 1 -     53260 T
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101140477 1 + 101219884 T
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                13568 1 -     21363 T
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           758874 1 +    964067 T
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10879059 1 +  10971483 T
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147660218 1 + 156195979 T
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            12203 1 +     23629 T
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60609835 1 +  78930452 T
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         36274 1 -     40477 T
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 274143 1 -    399297 T
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             15788 1 -     19186 C
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            48464 1 -     70449 T
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  204875 1 -    956709 T
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          178743 1 -   6883506 T
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16841415 1 +  31942871 T
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80033882 1 -  96802777 T
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18695878 1 -  18957592 t
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 319012 1 +    993696 T
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_170113                  275 1 +       818 T
i Diceros_bicornis.DicBicMic_scaffold_170113            C 0 C 0
s Echinops_telfairi.JH980316.1                           22991152 1 -  44670279 T
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                  9261 1 +     24177 t
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1488576 1 +   1727528 T
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        235789 1 -    369425 A
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           2797 1 -      7838 A
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85867263 1 +  99434291 T
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Equus_asinus.JREZ01000062.1                             5849742 1 -   7175178 C
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13348245 1 +  41866177 C
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                           9735 1 +     92910 C
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erythrocebus_patas.Contig8                             48767162 1 -  48907691 T
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          312027 1 +    330699 T
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             58456 1 +     89355 T
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              1612 1 +     13586 T
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               1548 1 -      6809 T
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             8019 1 +     36558 T
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             4336 1 +     60246 T
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 7824 1 +    109717 T
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               12198 1 +     16540 T
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                12475 1 +     27497 T
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           14931 1 +     26808 T
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                29665 1 +     46535 T
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              12388 1 -     29447 T
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129889417 1 - 159252932 t
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129276491 1 - 158578461 t
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 17626 1 +     52776 T
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13889623 1 -  19261668 T
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     207560 1 -    847004 T
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                            9940 1 -     43889 T
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           6989 1 +     27357 T
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               152874 1 +    324696 T
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    178089 1 -    189561 T
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                            9283 1 -     18683 T
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               1736 1 -     14630 T
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119648834 1 - 195582420 T
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   73840 1 +    118900 T
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                         2159 1 +      3980 T
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             24639 1 +     26611 T
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             2093 1 +     56096 T
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        25366 1 -     42470 T
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        41963 1 -     54384 T
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              13668 1 +     53719 T
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                24443 1 -     91191 T
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 I 132
s Heterocephalus_glaber.JH602058.1                        2547734 1 +  31725842 t
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               53144 1 +     73687 T
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              144152 1 +    277961 T
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      275572 1 -    477199 t
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              4726 1 -      9143 T
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg649                                    98408 1 +    115816 T
i Hoolock_leuconedys.ctg649                                C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 12736 1 -     67322 T
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hylobates_abbotti.k141_493872                              1545 1 +      5897 T
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_282275                                758 1 +      1846 T
i Hylobates_agilis.k141_282275                          C 0 C 0
s Hylobates_klossii.k141_466549                              8003 1 +     11537 T
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_muelleri.k141_1133650                             980 1 -      2775 T
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             29582 1 -     60944 T
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     2704 1 +     22540 T
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7122385 1 +  13083262 T
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_3334527                                   8603 1 +      9207 T
i Indri_indri.k141_3334527                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               5809 1 +     17520 T
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               20641 1 +     37189 T
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          46460 1 -    147782 T
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   110754 1 -    115756 T
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258403642 1 - 285822530 T
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        20536 1 +     39228 T
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            49912 1 +     63517 T
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        75132 1 +    116806 T
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     28173 1 -     33031 T
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3082439 1 -   3498232 T
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lipotes_vexillifer.KE558548.1                            132984 1 +   3060487 T
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19244248 1 +  19376315 T
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loxodonta_africana.GL010040.1                          20587718 1 -  62548349 t
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11083799 1 +  39895028 T
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             15934 1 +     74745 T
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12702440 1 +  12821369 T
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               4533 1 +      6569 T
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           42833 1 +     63263 T
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_1068107                               11410 1 +     12679 T
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                 983 1 +      3017 T
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  42595 1 -     79256 T
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196031515 1 + 196197964 T
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11441619 1 +  11645122 T
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   1545 1 -     46448 T
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                1372 1 -      3617 T
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 11705 1 -     55006 T
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43836744 1 +  43892939 T
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                3967 1 -      5978 T
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               1547 1 -     27140 T
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43433408 1 -  43563597 T
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4446234 1 -   4543643 T
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            143051 1 +    252755 T
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             33115 1 +     58827 T
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36870232 1 +  64221397 t
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_1828            224796 1 -    226874 T
i Mellivora_capensis.MelCap_flattened_line_1828         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233                8157 1 +     15977 T
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1043055 1 -  26018355 T
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_183284                    680 1 +      2166 T
i Mesoplodon_bidens.MesBid_scaffold_183284              C 0 C 0
s Microcebus_murinus.CM007691.1                          16506757 1 +  47401472 T
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  28094 1 -     48017 T
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               19727 1 -     32043 T
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22815444 1 -  98408828 A
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8206446 1 +  10048721 T
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            31127 1 +     45743 T
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        32082 1 +     34273 T
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         7737 1 -    104932 T
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     2171 1 +      8497 T
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 143407 1 +    154973 T
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                158047 1 +    265003 T
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 1674 1 -      4346 T
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  141358 1 -    168139 T
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          16263 1 -    100666 T
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70761803 1 +  92629107 T
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75484925 1 +  98207768 T
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67549241 1 +  89017189 T
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74324344 1 +  97876770 T
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              7794 1 +     98495 T
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4419672 1 -  28371801 T
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     86766 1 -    117718 T
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               964590 1 +   8389877 T
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5016267 1 +   6462685 t
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3462176 1 -   3747815 T
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         7373 1 +     66751 T
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             2128 1 -      8794 T
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nasalis_larvatus.k141_153429                               4447 1 +     48152 T
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4481338 1 -  14209539 T
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3948016 1 -   4490290 T
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  46377 1 +     94413 T
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1223136                          10214 1 -     11253 T
i Nomascus_annamensis.k141_1223136                      C 0 C 0
s Nomascus_concolor.k141_468488                               857 1 -      1482 T
i Nomascus_concolor.k141_468488                         C 0 C 0
s Nomascus_gabriellae.k141_906566                             846 1 -      2544 T
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             21320 1 -  18771707 T
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_844529                                   595 1 +      2124 T
i Nomascus_siki_a.k141_844529                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                26795 1 +   3668941 T
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Octodon_degus.JH651621.1                                3675496 1 +  10294119 T
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             675996 1 -   3126709 T
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1076799 1 +   1425656 t
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         33961 1 +     78940 T
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  121267 1 +    145789 A
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  33218 1 +     62360 T
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7221700 1 -   7562323 T
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              39953 1 -     66828 T
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      304130 1 -    505867 t
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       35628 1 +     38679 T
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18005069 1 -  38779656 t
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134074245 1 - 275406953 T
i Ovis_aries.CM001582.2                                 C 0 I 132
s Ovis_canadensis.OviCan_scaffold_6251                      75459 1 +    140051 T
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 I 132
s Pan_paniscus.CM003386.1                               127571078 1 - 205426864 T
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120148225 1 - 196562556 T
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  30580 1 +    295523 T
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3634184 1 +  18214204 t
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5023961 1 -   6340057 t
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1062960 1 -   1292953 T
i Pantholops_hodgsonii.KE114631.1                       C 0 I 275
s Papio_anubis.CM001492.2                               188152193 1 - 188283584 T
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            48405 1 +     76494 T
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47509589 1 +  47705337 T
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 63572 1 -    104429 T
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  13356 1 -     29451 T
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                33761 1 +     35859 T
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    111912 1 -    135482 T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4946390 1 -   8017169 T
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            118317 1 -    122454 T
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           1448 1 -      3310 T
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       21354 1 -     82327 T
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           18105 1 +     19957 T
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26736114 1 +  26888534 T
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            93362 1 +    112873 T
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             39960 1 -     61926 T
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        21389 1 +     78826 T
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              5340 1 -     15800 T
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                         8538 1 -     16101 T
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          1847 1 +      9673 T
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13470841 1 -  19735023 T
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                            9749 1 -     31692 T
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           2384 1 +     21690 T
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       19141 1 +     44506 T
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        19359 1 +     67491 T
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                       9604 1 -     98129 T
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     19204 1 +    147771 T
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        19455 1 -     23762 T
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_2078842                         19403 1 -     19696 T
i Plecturocebus_dubius.k141_2078842                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         19277 1 +    152463 T
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      6034 1 +      8943 T
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                          8994 1 +    134592 T
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          19587 1 -     75465 T
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              183631 1 -    373494 T
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19803535 1 +  19899266 T
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               1684 1 -     15069 T
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              1818 1 +     14865 T
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                73008 1 +     78963 T
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6845015 1 +  12164890 T
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     13450 1 -     30946 T
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                           18 1 +     11805 T
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           39485 1 +     52369 G
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         31874 1 -     44753 G
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            13796 1 +     27322 G
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       13440 1 -     53241 T
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         35711 1 -     48185 T
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           29226 1 +     77221 T
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                             938 1 -     27784 t
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        241531 1 -    344369 T
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13243054 1 -  17261082 t
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             601008 1 -   3946241 t
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131530777 1 - 161321710 t
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             25809 1 +     56732 T
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6802299 1 +   6970761 T
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             1691 1 +     18040 T
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                12885 1 +     68503 T
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13911168 1 +  90463843 T
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1784655 1 +   2252614 t
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           12246 1 -     14454 T
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206373572 1 - 206558726 T
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44851220 1 -  45163003 T
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                16357 1 +    109198 T
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       4531 1 +     12214 T
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 I 132
s Saimiri_boliviensis.NW_024100938.1                     15669012 1 -  43202129 T
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                         887 1 +     34089 T
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                               818 1 -     60842 T
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                               887 1 +     67014 T
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                               887 1 +     60816 T
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                  815 1 -     76454 T
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17337395 1 -  30362882 T
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         16996 1 -     62485 T
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   28431 1 -    114521 T
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1527475                       24234 1 +     26421 T
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       4696 1 +     20762 T
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         38429 1 +     40653 T
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                            8988 1 -     12194 T
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     22407 1 -     27512 T
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         31428 1 -     33692 T
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   94456 1 -    120886 T
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            14653 1 +    739146 T
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2236311 1 +   2842873 T
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             231241 1 -    276980 T
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            24025 1 +     62062 T
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189268952 1 + 218635234 T
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                     13898358 1 +  13920577 T
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               2868 1 -      6213 T
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               11806 1 +     45698 T
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      803804 1 +   1148477 T
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  54466 1 +     99546 T
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               23146 1 +     42269 T
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               56460 1 +     65473 T
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194003728 1 - 194193292 T
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                   672 1 +      6782 T
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Trachypithecus_auratus.k141_738098                        22806 1 +     38948 T
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   16533 1 -     32910 T
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       22431 1 +     24652 T
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      1316 1 -      3559 T
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           39255 1 -     54611 T
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       15254 1 +     17312 T
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    22624 1 -     25040 T
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          1290 1 +      3528 T
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  47652 1 +     51589 T
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       10820 1 +     14732 T
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       1298 1 -     28054 T
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44656093 1 -  44834318 T
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        1103 1 +      3372 T
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   2294 1 +     90398 T
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16078393 1 +  31416278 T
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2788229 1 -   3938065 t
i Tupaia_chinensis.KB320831.1                           I 268 C 0
s Tupaia_tana.TupTan_flattened_line_68454                     790 1 +     13056 T
i Tupaia_tana.TupTan_flattened_line_68454               I 269 C 0
s Tursiops_truncatus.MRVK01000923.1                      69310418 1 -  96451834 T
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 23618 1 -     25548 T
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6511046 1 +  28682327 T
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  1958 1 -     20643 T
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             21503 1 -     33872 T
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1521737 1 -   2331223 T
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                134200 1 -    281493 T
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       123508 1 -    134049 T
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        210724 1 -    227762 T
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           3921 1 -      8775 T
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Perognathus_longimembris.PerPac_flattened_line_22291      39705 3 -     45160 I
e Dipodomys_stephensi.DipSte_scaffold_44365                 23717 3 +     28912 I
e Dipodomys_ordii.KN672545.1                              3652163 3 +   4240102 I
e Chrysochloris_asiatica.ChrAsi_scaffold_141308              5625 53 -     12508 M
e Tonatia_saurophila.TonSau_scaffold_3334                  132944 0 -    259118 C
e Megaderma_lyra.MegLyr_scaffold_3562                       61508 0 -    234502 C
e Elephantulus_edwardii.JH947210.1                        7803302 7 +  15467074 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16291 1 -    119109 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     12283 2 -     20485 I
e Jaculus_jaculus.JH725517.1                              8561873 2 +  11848649 I
e Hylobates_pileatus_b.LG03                                     92553610 0 - 189753342 C
e Allactaga_bullata.AllBul_scaffold_70162                    8911 2 -     22067 I
e Perodicticus_potto.k141_713187                            21153 4 -     27972 I
e Perodicticus_ibeanus.k141_117958                           1856 4 -     23713 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65665988 0 +  89412551 C
e Nycticebus_coucang.k141_2051882                             464 0 +      6470 C
e Nycticebus_bengalensis.LG16                            65563619 0 -  95554990 C
e Nannospalax_galili.KL201303.1                            107449 0 +    362372 C
e Loris_tardigradus.ctg97                                 3775040 0 +   6799190 C
e Loris_lydekkerianus.k141_550999                            7289 0 +     84689 C
e Dolichotis_patagonum.DolPat_scaffold_14102                33375 0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             56104 16 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                14631 16 +     26546 I
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 27150 0 -     67205 C
e Cricetulus_griseus.LT883672.1                          53025429 0 +  72327488 C
e Cavia_tschudii.CavTsc_scaffold_488                       173989 0 +    436027 C
e Cavia_porcellus.DS562889.1                             15795798 0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15783848 16 -  24422027 I
e Arctocebus_calabarensis.k141_1161114                      14526 30 +     17483 I

a score=0.000000
s hg38.chr4_GL000008v2_random                                8344 2 +    209709 CA
s Acinonyx_jubatus.LLWD01000356.1                         2030438 2 +   3721120 aa
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    108702 2 -    189883 CA
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10653772 2 +  23371972 AA
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7090473 2 -  16596857 AA
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allenopithecus_nigroviridis.k141_3103707                  59367 2 +     61638 CA
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        51175 2 +     53391 CA
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         1899 2 +     72529 CA
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          1475 2 +      3797 CA
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             6568 2 -     18050 CA
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  7685 2 -     11521 CA
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              7243 2 -     21359 CA
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1856473                                5626 2 +      7227 CA
i Alouatta_juara.k141_1856473                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          6540 2 -     10438 CA
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            3195 2 +      7047 CA
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             6479 2 +     10410 CA
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1374428                             282 2 -     25526 CA
i Alouatta_puruensis.k141_1374428                       C 0 C 0
s Alouatta_seniculus.k141_990213                             3200 2 +      6429 CA
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3517207 2 +   4113121 AA
i Ammotragus_lervia.NIVO01013474.1                      I 275 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      387392 2 -    631301 GA
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            27840 2 +     33004 AA
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 58874 2 +     78111 CA
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            1805 2 +     22701 CA
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5745765 2 +   9889416 ca
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             2357 2 -    104377 CA
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               2357 2 +     23246 CA
i Aotus_vociferans.k141_718647                          C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 5491 2 -     29036 AA
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9535618 2 +  39197703 CA
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             56906 2 +     85812 CA
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 7903 2 +     89302 CA
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             12412 2 -     58268 CA
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             60400 2 +    119057 CA
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               2350 2 -     25888 CA
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 3206 2 -     16375 CA
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_767228                               9178 2 -      9688 CA
i Avahi_peyrierasi.k141_767228                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26377144 2 +  51448160 AA
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        2375 2 -     13118 AA
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   40307 2 -     72089 AA
i Beatragus_hunteri.BeaHun_scaffold_21644               I 275 C 0
s Bison_bison.KN264915.1                                  6556454 2 +   6870073 AA
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138136685 2 - 161108492 AA
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     569063 2 -    998990 AA
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136292418 2 - 158972876 AA
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1228039 2 -   1914593 AA
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               110248 2 -    171031 CA
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                  9274 2 +    125063 CA
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                11322 2 -    216513 CA
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        3861 2 -    134917 CA
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3216176 2 -   8989139 AA
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           394360 2 -  15254737 AA
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2970097 2 +   6889770 AA
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11515156 2 +  39901454 AA
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   10173 2 +     87036 AA
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11261815 2 -  35597290 AA
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11084344 2 +  39895921 AA
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16451378 2 -  44759192 AA
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21322314 2 + 157394656 AA
i Capra_aegagrus.CM003214.1                             I 275 C 0
s Capra_hircus.CM004562.1                               135703541 2 - 157403528 AA
i Capra_hircus.CM004562.1                               I 275 C 0
s Capromys_pilorides.CapPil_scaffold_647363                  1074 2 +      1887 CT
i Capromys_pilorides.CapPil_scaffold_647363             C 0 C 0
s Carlito_syrichta.NW_007248099.1                          305657 2 +    345090 CA
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               56569 2 +     67245 AA
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   27087 2 +     33760 CT
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   155890 2 -    276539 AG
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18887087 2 -  29618158 CA
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 4633 2 -     26817 CA
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                 8873 2 +     25043 CA
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         4706 2 +     21754 CA
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4360356 2 +   7569818 AA
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_520758          358 2 -       446 AA
i Ceratotherium_simum_cottoni.CerCot_scaffold_520758    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6551163 2 +   6739814 CA
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      52640 2 -     54931 CA
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         17624 2 -     19697 CA
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         55155 2 -    107033 CA
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        1598 2 -      3853 CA
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          25530 2 +     30494 CA
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           1553 2 -      4022 CA
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          1445 2 -      3505 CA
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           20251 2 +     35983 CA
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11986773 2 +  12117833 CA
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46473526 2 +  46592721 CA
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      31353 2 +     33420 CA
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        1389 2 -      3443 CA
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      2380 2 -      4669 CA
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        2181 2 -      4411 CA
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         1704 2 -      4205 CA
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           55542 2 -     68416 CA
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            4591 2 +     13308 CA
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             1886 2 -     18223 CA
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             18909 2 +     25473 CA
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           37948 2 +     57117 CA
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          42623 2 +     54541 CA
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15958040 2 +  43084221 ct
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         67469 2 +    196370 CA
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          11643 2 +     40510 CA
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15134984 2 -  15256731 CA
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      30030 2 -     53260 CA
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101140478 2 + 101219884 CA
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                13569 2 -     21363 CA
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           758875 2 +    964067 CA
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10879060 2 +  10971483 CA
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147660219 2 + 156195979 CA
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            12204 2 +     23629 CA
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60609836 2 +  78930452 GA
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         36275 2 -     40477 AA
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 274144 2 -    399297 CA
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             15789 2 -     19186 AA
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            48465 2 -     70449 AA
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  204876 2 -    956709 CT
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          178744 2 -   6883506 CA
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16841416 2 +  31942871 TA
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80033883 2 -  96802777 AA
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18695879 2 -  18957592 aa
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 319013 2 +    993696 AA
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_170113                  276 2 +       818 AA
i Diceros_bicornis.DicBicMic_scaffold_170113            C 0 C 0
s Echinops_telfairi.JH980316.1                           22991153 2 -  44670279 CA
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                  9262 2 +     24177 aa
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1488577 2 +   1727528 AA
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7803309 1 +  15467074 -a
i Elephantulus_edwardii.JH947210.1                      I 7 C 0
s Ellobius_lutescens.LOEQ01003611.1                        235790 2 -    369425 CC
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           2798 2 -      7838 CA
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85867264 2 +  99434291 AA
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Equus_asinus.JREZ01000062.1                             5849743 2 -   7175178 AA
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13348246 2 +  41866177 AA
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                           9736 2 +     92910 AA
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erythrocebus_patas.Contig8                             48767163 2 -  48907691 CA
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          312028 2 +    330699 AA
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             58457 2 +     89355 AA
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              1613 2 +     13586 CA
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               1549 2 -      6809 CA
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             8020 2 +     36558 CA
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             4337 2 +     60246 CA
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 7825 2 +    109717 CA
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               12199 2 +     16540 CA
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                12476 2 +     27497 CA
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           14932 2 +     26808 CA
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                29666 2 +     46535 CA
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              12389 2 -     29447 CA
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129889418 2 - 159252932 aa
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129276492 2 - 158578461 aa
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 17627 2 +     52776 AA
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13889624 2 -  19261668 CT
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     207561 2 -    847004 AT
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                            9941 2 -     43889 AT
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           6990 2 +     27357 AA
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               152875 2 +    324696 CA
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    178090 2 -    189561 AA
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                            9284 2 -     18683 CA
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               1737 2 -     14630 CA
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119648835 2 - 195582420 CA
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   73841 2 +    118900 CA
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                         2160 2 +      3980 CA
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             24640 2 +     26611 CA
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             2094 2 +     56096 CA
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        25367 2 -     42470 CA
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        41964 2 -     54384 CA
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              13669 2 +     53719 AA
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                24576 2 -     91191 AA
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 132 C 0
s Heterocephalus_glaber.JH602058.1                        2547735 2 +  31725842 CT
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               53145 2 +     73687 CT
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              144153 2 +    277961 AA
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      275573 2 -    477199 aa
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              4727 2 -      9143 AA
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg649                                    98409 2 +    115816 CA
i Hoolock_leuconedys.ctg649                                C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 12737 2 -     67322 AA
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hylobates_abbotti.k141_493872                              1546 2 +      5897 CA
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_282275                                759 2 +      1846 CA
i Hylobates_agilis.k141_282275                          C 0 C 0
s Hylobates_klossii.k141_466549                              8004 2 +     11537 CA
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_muelleri.k141_1133650                             981 2 -      2775 CA
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             29583 2 -     60944 CA
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     2705 2 +     22540 CT
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7122386 2 +  13083262 CA
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_3334527                                   8604 2 +      9207 CA
i Indri_indri.k141_3334527                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               5810 2 +     17520 AA
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               20642 2 +     37189 AA
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          46461 2 -    147782 CA
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   110755 2 -    115756 AA
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258403643 2 - 285822530 CA
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        20537 2 +     39228 CA
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            49913 2 +     63517 CA
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        75133 2 +    116806 CA
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     28174 2 -     33031 CA
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3082440 2 -   3498232 AA
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lipotes_vexillifer.KE558548.1                            132985 2 +   3060487 AA
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19244249 2 +  19376315 CA
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loxodonta_africana.GL010040.1                          20587719 2 -  62548349 ca
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11083800 2 +  39895028 AA
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             15935 2 +     74745 CA
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12702441 2 +  12821369 CA
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               4534 2 +      6569 CA
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           42834 2 +     63263 CA
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_1068107                               11411 2 +     12679 CA
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                 984 2 +      3017 CA
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  42596 2 -     79256 CA
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196031516 2 + 196197964 CA
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11441620 2 +  11645122 CA
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   1546 2 -     46448 CA
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                1373 2 -      3617 CA
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 11706 2 -     55006 CA
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43836745 2 +  43892939 CA
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                3968 2 -      5978 CA
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               1548 2 -     27140 CA
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43433409 2 -  43563597 CA
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4446235 2 -   4543643 CA
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            143052 2 +    252755 AA
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             33116 2 +     58827 AA
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36870233 2 +  64221397 ca
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_1828            224797 2 -    226874 AA
i Mellivora_capensis.MelCap_flattened_line_1828         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233                8158 2 +     15977 AA
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1043056 2 -  26018355 CT
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_183284                    681 2 +      2166 AA
i Mesoplodon_bidens.MesBid_scaffold_183284              C 0 C 0
s Microcebus_murinus.CM007691.1                          16506758 2 +  47401472 CA
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  28095 2 -     48017 CA
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               19728 2 -     32043 AA
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22815445 2 -  98408828 CG
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8206447 2 +  10048721 GA
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            31128 2 +     45743 GA
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        32083 2 +     34273 CA
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         7738 2 -    104932 AA
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     2172 2 +      8497 CA
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 143408 2 +    154973 AA
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                158048 2 +    265003 AA
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 1675 2 -      4346 AA
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  141359 2 -    168139 AA
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          16264 2 -    100666 AA
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70761804 2 +  92629107 CA
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75484926 2 +  98207768 CA
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67549242 2 +  89017189 CA
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74324345 2 +  97876770 CA
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              7795 2 +     98495 CA
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4419673 2 -  28371801 AT
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     86767 2 -    117718 CT
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               964591 2 +   8389877 AA
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5016268 2 +   6462685 aa
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3462177 2 -   3747815 AA
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         7374 2 +     66751 AA
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             2129 2 -      8794 CA
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nasalis_larvatus.k141_153429                               4448 2 +     48152 CA
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4481339 2 -  14209539 AA
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3948017 2 -   4490290 AA
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  46378 2 +     94413 AA
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1223136                          10215 2 -     11253 CA
i Nomascus_annamensis.k141_1223136                      C 0 C 0
s Nomascus_concolor.k141_468488                               858 2 -      1482 CA
i Nomascus_concolor.k141_468488                         C 0 C 0
s Nomascus_gabriellae.k141_906566                             847 2 -      2544 CA
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             21321 2 -  18771707 CA
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_844529                                   596 2 +      2124 CA
i Nomascus_siki_a.k141_844529                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                26796 2 +   3668941 AA
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Octodon_degus.JH651621.1                                3675497 2 +  10294119 CT
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             675997 2 -   3126709 AA
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1076800 2 +   1425656 aa
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         33962 2 +     78940 AA
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  121268 2 +    145789 TA
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  33219 2 +     62360 CA
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7221701 2 -   7562323 AA
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              39954 2 -     66828 CA
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      304131 2 -    505867 aa
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       35629 2 +     38679 AA
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18005070 2 -  38779656 aa
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134074378 2 - 275406953 AA
i Ovis_aries.CM001582.2                                 I 132 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      75592 2 +    140051 AA
i Ovis_canadensis.OviCan_scaffold_6251                  I 132 C 0
s Pan_paniscus.CM003386.1                               127571079 2 - 205426864 CA
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120148226 2 - 196562556 CA
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  30581 2 +    295523 AA
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3634185 2 +  18214204 aa
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5023962 2 -   6340057 aa
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1063236 2 -   1292953 AA
i Pantholops_hodgsonii.KE114631.1                       I 275 C 0
s Papio_anubis.CM001492.2                               188152194 2 - 188283584 CA
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            48406 2 +     76494 CA
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47509590 2 +  47705337 CA
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 63573 2 -    104429 CA
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  13357 2 -     29451 CA
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                33762 2 +     35859 CA
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    111913 2 -    135482 AA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4946391 2 -   8017169 CC
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            118318 2 -    122454 AA
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           1449 2 -      3310 CA
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       21355 2 -     82327 CA
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           18106 2 +     19957 CA
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26736115 2 +  26888534 CA
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            93363 2 +    112873 AA
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             39961 2 -     61926 CA
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        21390 2 +     78826 CA
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              5341 2 -     15800 CA
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                         8539 2 -     16101 CA
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          1848 2 +      9673 CA
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13470842 2 -  19735023 CA
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                            9750 2 -     31692 CA
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           2385 2 +     21690 AA
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       19142 2 +     44506 CA
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        19360 2 +     67491 CA
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                       9605 2 -     98129 CA
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     19205 2 +    147771 CA
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        19456 2 -     23762 CA
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_2078842                         19404 2 -     19696 CA
i Plecturocebus_dubius.k141_2078842                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         19278 2 +    152463 CA
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      6035 2 +      8943 CA
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                          8995 2 +    134592 CA
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          19588 2 -     75465 CA
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              183632 2 -    373494 CA
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19803536 2 +  19899266 CA
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               1685 2 -     15069 CA
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              1819 2 +     14865 CA
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                73009 2 +     78963 CT
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6845016 2 +  12164890 CA
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     13451 2 -     30946 CA
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                           19 2 +     11805 TA
i Propithecus_coronatus.k141_1353159                    C 0 I 138
s Propithecus_diadema.k141_577245                           39486 2 +     52369 CA
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         31875 2 -     44753 CA
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            13797 2 +     27322 CA
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       13441 2 -     53241 CA
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         35712 2 -     48185 CA
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           29227 2 +     77221 AA
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                             939 2 -     27784 aa
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        241532 2 -    344369 AA
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13243055 2 -  17261082 aa
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             601009 2 -   3946241 aa
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131530778 2 - 161321710 aa
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             25810 2 +     56732 CA
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6802300 2 +   6970761 CA
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             1692 2 +     18040 CA
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                12886 2 +     68503 AA
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13911169 2 +  90463843 CA
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1784656 2 +   2252614 aa
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           12247 2 -     14454 CA
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206373573 2 - 206558726 CA
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44851221 2 -  45163003 CA
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                16358 2 +    109198 AA
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       4664 2 +     12214 AA
i Saiga_tatarica.SaiTat_scaffold_82192                  I 132 C 0
s Saimiri_boliviensis.NW_024100938.1                     15669013 2 -  43202129 CA
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                         888 2 +     34089 CA
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                               819 2 -     60842 CA
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                               888 2 +     67014 CA
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                               888 2 +     60816 CA
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                  816 2 -     76454 CA
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17337396 2 -  30362882 CA
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         16997 2 -     62485 CA
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   28432 2 -    114521 GA
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1527475                       24235 2 +     26421 CA
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       4697 2 +     20762 CA
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         38430 2 +     40653 CA
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                            8989 2 -     12194 CA
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     22408 2 -     27512 CA
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         31429 2 -     33692 CA
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   94457 2 -    120886 TA
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            14654 2 +    739146 AA
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2236312 2 +   2842873 CA
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             231242 2 -    276980 AA
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            24026 2 +     62062 AA
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189268953 2 + 218635234 AA
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                     13898359 2 +  13920577 CA
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               2869 2 -      6213 AA
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               11807 2 +     45698 CA
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      803805 2 +   1148477 AA
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  54467 2 +     99546 AA
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               23147 2 +     42269 CA
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               56461 2 +     65473 CA
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194003729 2 - 194193292 CA
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                   673 2 +      6782 CA
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  132944 2 -    259118 AA
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        22807 2 +     38948 CA
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   16534 2 -     32910 CA
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       22432 2 +     24652 CA
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      1317 2 -      3559 CA
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           39256 2 -     54611 CA
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       15255 2 +     17312 CA
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    22625 2 -     25040 CA
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          1291 2 +      3528 CA
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  47653 2 +     51589 CA
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       10821 2 +     14732 CA
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       1299 2 -     28054 CA
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44656094 2 -  44834318 CA
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        1104 2 +      3372 CA
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   2295 2 +     90398 AA
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16078394 2 +  31416278 CA
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2788230 2 -   3938065 ca
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                     791 2 +     13056 CA
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69310419 2 -  96451834 AA
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 23619 2 -     25548 GA
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6511047 2 +  28682327 AA
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  1959 2 -     20643 CA
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             21504 2 -     33872 CA
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1521738 2 -   2331223 AA
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                134201 2 -    281493 AA
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       123509 2 -    134049 CA
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        210725 2 -    227762 AA
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           3922 2 -      8775 AA
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Perognathus_longimembris.PerPac_flattened_line_22291      39705 3 -     45160 I
e Dipodomys_stephensi.DipSte_scaffold_44365                 23717 3 +     28912 I
e Dipodomys_ordii.KN672545.1                              3652163 3 +   4240102 I
e Chrysochloris_asiatica.ChrAsi_scaffold_141308              5625 53 -     12508 M
e Megaderma_lyra.MegLyr_scaffold_3562                       61508 0 -    234502 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16291 1 -    119109 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     12283 2 -     20485 I
e Jaculus_jaculus.JH725517.1                              8561873 2 +  11848649 I
e Hylobates_pileatus_b.LG03                                     92553610 0 - 189753342 C
e Allactaga_bullata.AllBul_scaffold_70162                    8911 2 -     22067 I
e Perodicticus_potto.k141_713187                            21153 4 -     27972 I
e Perodicticus_ibeanus.k141_117958                           1856 4 -     23713 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65665988 0 +  89412551 C
e Nycticebus_coucang.k141_2051882                             464 0 +      6470 C
e Nycticebus_bengalensis.LG16                            65563619 0 -  95554990 C
e Nannospalax_galili.KL201303.1                            107449 0 +    362372 C
e Loris_tardigradus.ctg97                                 3775040 0 +   6799190 C
e Loris_lydekkerianus.k141_550999                            7289 0 +     84689 C
e Dolichotis_patagonum.DolPat_scaffold_14102                33375 0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             56104 16 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                14631 16 +     26546 I
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 27150 0 -     67205 C
e Cricetulus_griseus.LT883672.1                          53025429 0 +  72327488 C
e Cavia_tschudii.CavTsc_scaffold_488                       173989 0 +    436027 C
e Cavia_porcellus.DS562889.1                             15795798 0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15783848 16 -  24422027 I
e Arctocebus_calabarensis.k141_1161114                      14526 30 +     17483 I

a score=0.000000
s hg38.chr4_GL000008v2_random                                8346 3 +    209709 GAA
s Acinonyx_jubatus.LLWD01000356.1                         2030440 3 +   3721120 gca
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    108704 3 -    189883 GAA
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10653774 3 +  23371972 GCA
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7090475 3 -  16596857 GCA
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allenopithecus_nigroviridis.k141_3103707                  59369 3 +     61638 GAA
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        51177 3 +     53391 GAA
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         1901 3 +     72529 GAA
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          1477 3 +      3797 GAA
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             6570 3 -     18050 GAA
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  7687 3 -     11521 GAA
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              7245 3 -     21359 GAA
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1856473                                5628 3 +      7227 GAA
i Alouatta_juara.k141_1856473                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          6542 3 -     10438 GAA
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            3197 3 +      7047 GAA
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             6481 3 +     10410 GAA
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1374428                             284 3 -     25526 GAA
i Alouatta_puruensis.k141_1374428                       C 0 C 0
s Alouatta_seniculus.k141_990213                             3202 3 +      6429 GAA
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3517209 3 +   4113121 GCA
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      387394 3 -    631301 GCA
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            27842 3 +     33004 GCA
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 58876 3 +     78111 GAA
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            1807 3 +     22701 GAA
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5745767 3 +   9889416 gaa
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             2359 3 -    104377 GAA
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               2359 3 +     23246 GAA
i Aotus_vociferans.k141_718647                          C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 5493 3 -     29036 GCA
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9535620 3 +  39197703 GAA
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             56908 3 +     85812 GAA
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 7905 3 +     89302 GAA
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             12414 3 -     58268 GAA
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             60402 3 +    119057 GAA
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               2352 3 -     25888 GAA
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 3208 3 -     16375 GAA
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_767228                               9180 3 -      9688 GAA
i Avahi_peyrierasi.k141_767228                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26377146 3 +  51448160 GCA
i Balaenoptera_acutorostrata.KI537095.1                 C 0 I 2
s Balaenoptera_bonaerensis.DF502048.1                        2377 3 -     13118 GCA
i Balaenoptera_bonaerensis.DF502048.1                   C 0 I 2
s Beatragus_hunteri.BeaHun_scaffold_21644                   40309 3 -     72089 GCA
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6556456 3 +   6870073 GCA
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138136687 3 - 161108492 GCA
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     569065 3 -    998990 GCA
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136292420 3 - 158972876 GCA
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1228041 3 -   1914593 GCA
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               110250 3 -    171031 GAA
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                  9276 3 +    125063 GAA
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                11324 3 -    216513 GAA
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        3863 3 -    134917 GAA
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3216178 3 -   8989139 GCA
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           394362 3 -  15254737 GCA
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2970099 3 +   6889770 GCA
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11515158 3 +  39901454 GCA
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   10175 3 +     87036 GCA
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11261817 3 -  35597290 GCA
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11084346 3 +  39895921 GCA
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16451380 3 -  44759192 GCA
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21322316 3 + 157394656 GCA
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135703543 3 - 157403528 GCA
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_647363                  1076 3 +      1887 GAA
i Capromys_pilorides.CapPil_scaffold_647363             C 0 C 0
s Carlito_syrichta.NW_007248099.1                          305659 3 +    345090 GGA
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               56571 3 +     67245 GCA
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   27089 3 +     33760 AAA
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   155892 3 -    276539 GCA
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18887089 3 -  29618158 GAA
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 4635 3 -     26817 GAA
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                 8875 3 +     25043 GAA
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         4708 3 +     21754 GGA
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4360358 3 +   7569818 GCA
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_520758          360 3 -       446 GCA
i Ceratotherium_simum_cottoni.CerCot_scaffold_520758    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6551165 3 +   6739814 GAA
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      52642 3 -     54931 GAA
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         17626 3 -     19697 GAA
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         55157 3 -    107033 GAA
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        1600 3 -      3853 GAA
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          25532 3 +     30494 GAA
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           1555 3 -      4022 GAA
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          1447 3 -      3505 GAA
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           20253 3 +     35983 GAA
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11986775 3 +  12117833 GAA
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46473528 3 +  46592721 GAA
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      31355 3 +     33420 GAA
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        1391 3 -      3443 GAA
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      2382 3 -      4669 GAA
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        2183 3 -      4411 GAA
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         1706 3 -      4205 GAA
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           55544 3 -     68416 GAA
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            4593 3 +     13308 GAA
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             1888 3 -     18223 GAA
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             18911 3 +     25473 GAA
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           37950 3 +     57117 GAA
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          42625 3 +     54541 GAA
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15958042 3 +  43084221 gaa
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         67471 3 +    196370 GAA
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          11645 3 +     40510 GAA
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15134986 3 -  15256731 GAA
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      30032 3 -     53260 GAA
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101140480 3 + 101219884 GAA
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                13571 3 -     21363 GCA
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           758877 3 +    964067 GCA
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10879062 3 +  10971483 GAA
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147660221 3 + 156195979 GAA
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            12206 3 +     23629 GAA
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60609838 3 +  78930452 GCA
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         36277 3 -     40477 GCA
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 274146 3 -    399297 GAA
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             15791 3 -     19186 TTA
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            48467 3 -     70449 GCA
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  204878 3 -    956709 AGA
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 I 2
s Dasypus_novemcinctus.JH568778.1                          178746 3 -   6883506 GCA
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16841418 3 +  31942871 GAA
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80033885 3 -  96802777 GCA
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18695881 3 -  18957592 gCA
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 319015 3 +    993696 GCA
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_170113                  278 3 +       818 GCA
i Diceros_bicornis.DicBicMic_scaffold_170113            C 0 C 0
s Echinops_telfairi.JH980316.1                           22991155 3 -  44670279 TCA
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                  9264 3 +     24177 gcA
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1488579 3 +   1727528 GCA
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7803310 3 +  15467074 aga
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        235792 3 -    369425 TAA
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           2800 3 -      7838 TAA
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85867266 3 +  99434291 GGA
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Equus_asinus.JREZ01000062.1                             5849745 3 -   7175178 GTA
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13348248 3 +  41866177 GTA
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                           9738 3 +     92910 GTA
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erythrocebus_patas.Contig8                             48767165 3 -  48907691 GAA
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          312030 3 +    330699 GCA
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 I 2
s Eubalaena_japonica.EubJap_flattened_line_7756             58459 3 +     89355 GCA
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 I 2
s Eulemur_albifrons.k141_715837                              1615 3 +     13586 GAA
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               1551 3 -      6809 GAA
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             8022 3 +     36558 GAA
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             4339 3 +     60246 GAA
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 7827 3 +    109717 GAA
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               12201 3 +     16540 GAA
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                12478 3 +     27497 GAA
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           14934 3 +     26808 GAA
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                29668 3 +     46535 GAA
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              12391 3 -     29447 GAA
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129889420 3 - 159252932 gca
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129276494 3 - 158578461 gca
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 17629 3 +     52776 GCA
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13889626 3 -  19261668 GAA
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     207563 3 -    847004 AAA
i Galago_moholi.ctg555                                  C 0 I 1
s Galago_senegalensis.k141_964197                            9943 3 -     43889 AAA
i Galago_senegalensis.k141_964197                       C 0 I 1
s Galagoides_demidoff.k141_1769638                           6992 3 +     27357 AAA
i Galagoides_demidoff.k141_1769638                      C 0 I 1
s Galeopterus_variegatus.GalVar_scaffold_354               152877 3 +    324696 GAA
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    178092 3 -    189561 GCA
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                            9286 3 -     18683 GAA
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               1739 3 -     14630 GAA
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119648837 3 - 195582420 GAA
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   73843 3 +    118900 GAA
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                         2162 3 +      3980 GAA
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             24642 3 +     26611 GAA
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             2096 3 +     56096 GAA
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        25369 3 -     42470 GAA
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        41966 3 -     54384 GAA
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              13671 3 +     53719 GCA
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                24578 3 -     91191 GCA
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2547737 3 +  31725842 GAA
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               53147 3 +     73687 GCA
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              144155 3 +    277961 GCA
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      275575 3 -    477199 gtG
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              4729 3 -      9143 GTG
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg649                                    98411 3 +    115816 GAA
i Hoolock_leuconedys.ctg649                                C 0 I 19
s Hyaena_hyaena.HyaHya_flattened_line_20729                 12739 3 -     67322 GCA
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hylobates_abbotti.k141_493872                              1548 3 +      5897 GAA
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_282275                                761 3 +      1846 GAA
i Hylobates_agilis.k141_282275                          C 0 C 0
s Hylobates_klossii.k141_466549                              8006 3 +     11537 GAA
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_muelleri.k141_1133650                             983 3 -      2775 GAA
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             29585 3 -     60944 GAA
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     2707 3 +     22540 GAA
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7122388 3 +  13083262 GAA
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 I 112
s Indri_indri.k141_3334527                                   8606 3 +      9207 GAA
i Indri_indri.k141_3334527                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               5812 3 +     17520 GCA
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               20644 3 +     37189 GCA
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          46463 3 -    147782 GAA
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   110757 3 -    115756 GCA
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258403645 3 - 285822530 GAA
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        20539 3 +     39228 GAA
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            49915 3 +     63517 GAA
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        75135 3 +    116806 GAA
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     28176 3 -     33031 GAA
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3082442 3 -   3498232 GCA
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                     9649 3 +     22452 AAA
i Lepus_americanus.LepAme_scaffold_62849                N 0 I 9
s Lipotes_vexillifer.KE558548.1                            132987 3 +   3060487 GCA
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19244251 3 +  19376315 GAA
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            7289 2 +     84689 -AA
i Loris_lydekkerianus.k141_550999                       C 0 I 1
s Loris_tardigradus.ctg97                                 3775040 2 +   6799190 -AA
i Loris_tardigradus.ctg97                               C 0 I 1
s Loxodonta_africana.GL010040.1                          20587721 3 -  62548349 gCA
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11083802 3 +  39895028 GCA
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             15937 3 +     74745 GAA
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12702443 3 +  12821369 GAA
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               4536 3 +      6569 GAA
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           42836 3 +     63263 GAA
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_1068107                               11413 3 +     12679 GAA
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                 986 3 +      3017 GAA
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  42598 3 -     79256 GAA
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196031518 3 + 196197964 GAA
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11441622 3 +  11645122 GAA
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   1548 3 -     46448 GAA
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                1375 3 -      3617 GAA
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 11708 3 -     55006 GAA
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43836747 3 +  43892939 GAA
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                3970 3 -      5978 GAA
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               1550 3 -     27140 GAA
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43433411 3 -  43563597 GAA
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4446237 3 -   4543643 GAA
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            143054 3 +    252755 GCA
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             33118 3 +     58827 GCA
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36870235 3 +  64221397 gAT
i Marmota_marmota.CZRN01000005.1                        C 0 I 112
s Mellivora_capensis.MelCap_flattened_line_1828            224799 3 -    226874 GCA
i Mellivora_capensis.MelCap_flattened_line_1828         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233                8160 3 +     15977 GAA
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1043058 3 -  26018355 TAA
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_183284                    683 3 +      2166 GCA
i Mesoplodon_bidens.MesBid_scaffold_183284              C 0 C 0
s Microcebus_murinus.CM007691.1                          16506760 3 +  47401472 GAA
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  28097 3 -     48017 ACA
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               19730 3 -     32043 GCA
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22815447 3 -  98408828 TAA
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8206449 3 +  10048721 GCA
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            31130 3 +     45743 GCA
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        32085 3 +     34273 GAA
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         7740 3 -    104932 GCA
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     2174 3 +      8497 GAA
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 143410 3 +    154973 GCA
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                158050 3 +    265003 GCA
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 1677 3 -      4346 GCA
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  141361 3 -    168139 GCA
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          16266 3 -    100666 GCA
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70761806 3 +  92629107 TGA
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75484928 3 +  98207768 TGA
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67549244 3 +  89017189 TGA
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74324347 3 +  97876770 TGA
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              7797 3 +     98495 GAA
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4419675 3 -  28371801 GCA
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     86769 3 -    117718 GAA
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               964593 3 +   8389877 GCA
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5016270 3 +   6462685 gCA
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3462179 3 -   3747815 GCA
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         7376 3 +     66751 GCA
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             2131 3 -      8794 ACA
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nasalis_larvatus.k141_153429                               4450 3 +     48152 GAA
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4481341 3 -  14209539 GCA
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3948019 3 -   4490290 GCA
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  46380 3 +     94413 ACA
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1223136                          10217 3 -     11253 GAA
i Nomascus_annamensis.k141_1223136                      C 0 C 0
s Nomascus_concolor.k141_468488                               860 3 -      1482 GAA
i Nomascus_concolor.k141_468488                         C 0 I 26
s Nomascus_gabriellae.k141_906566                             849 3 -      2544 GAA
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             21323 3 -  18771707 GAA
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_844529                                   598 3 +      2124 GAA
i Nomascus_siki_a.k141_844529                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                26798 3 +   3668941 GCA
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65563619 2 -  95554990 -AA
i Nycticebus_bengalensis.LG16                           C 0 I 1
s Nycticebus_coucang.k141_2051882                             464 2 +      6470 -AA
i Nycticebus_coucang.k141_2051882                       C 0 I 1
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65665988 2 +  89412551 -AA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 I 1
s Ochotona_princeps.JH802095.1                            4992310 3 -  23139505 aaA
i Ochotona_princeps.JH802095.1                          N 0 C 0
s Octodon_degus.JH651621.1                                3675499 3 +  10294119 GAA
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             675999 3 -   3126709 GCA
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1076802 3 +   1425656 gca
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         33964 3 +     78940 GCA
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  121270 3 +    145789 TAA
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  33221 3 +     62360 TAA
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7221703 3 -   7562323 GCA
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              39956 3 -     66828 AAA
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141872298 3 + 163896628 aaa
i Oryctolagus_cuniculus.CM000803.1                      N 0 I 9
s Otocyon_megalotis.JAEUCK010005121.1                      304133 3 -    505867 gca
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       35631 3 +     38679 AAA
i Otolemur_crassicaudatus.k141_321880                   C 0 I 1
s Otolemur_garnettii.GL873528.1                          18005072 3 -  38779656 aaa
i Otolemur_garnettii.GL873528.1                         C 0 I 1
s Ovis_aries.CM001582.2                                 134074380 3 - 275406953 GCA
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      75594 3 +    140051 GCA
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127571081 3 - 205426864 GAA
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120148228 3 - 196562556 GAA
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  30583 3 +    295523 GCA
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3634187 3 +  18214204 gca
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5023964 3 -   6340057 gca
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1063238 3 -   1292953 GCA
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188152196 3 - 188283584 GAA
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            48408 3 +     76494 GAA
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47509592 3 +  47705337 GAA
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 63575 3 -    104429 GAA
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  13359 3 -     29451 GAA
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                33764 3 +     35859 GAA
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    111915 3 -    135482 GCA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           1860 2 -     23713 -AA
i Perodicticus_ibeanus.k141_117958                      I 4 I 1
s Perodicticus_potto.k141_713187                            21157 2 -     27972 -AA
i Perodicticus_potto.k141_713187                        I 4 I 1
s Peromyscus_maniculatus.KI615518.1                       4946393 3 -   8017169 TAA
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            118320 3 -    122454 GCA
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           1451 3 -      3310 GAA
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       21357 3 -     82327 GAA
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           18108 3 +     19957 GAA
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26736117 3 +  26888534 GAA
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            93365 3 +    112873 GCA
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             39963 3 -     61926 GAA
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        21392 3 +     78826 GAA
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              5343 3 -     15800 GAA
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                         8541 3 -     16101 GAA
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          1850 3 +      9673 GAA
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13470844 3 -  19735023 GAA
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                            9752 3 -     31692 GAA
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           2387 3 +     21690 GCA
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       19144 3 +     44506 GAA
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        19362 3 +     67491 GAA
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                       9607 3 -     98129 GAA
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     19207 3 +    147771 GAA
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        19458 3 -     23762 GAA
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_2078842                         19406 3 -     19696 GAA
i Plecturocebus_dubius.k141_2078842                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         19280 3 +    152463 GAA
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      6037 3 +      8943 GAA
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                          8997 3 +    134592 GAA
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          19590 3 -     75465 GAA
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              183634 3 -    373494 GAA
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19803538 3 +  19899266 GAA
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               1687 3 -     15069 GAA
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              1821 3 +     14865 GAA
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                73011 3 +     78963 GCA
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6845018 3 +  12164890 GAA
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     13453 3 -     30946 GAA
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                          159 3 +     11805 GAA
i Propithecus_coronatus.k141_1353159                    I 138 C 0
s Propithecus_diadema.k141_577245                           39488 3 +     52369 GAA
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         31877 3 -     44753 GAA
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            13799 3 +     27322 GAA
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       13443 3 -     53241 GAA
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         35714 3 -     48185 GAA
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           29229 3 +     77221 GAA
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                             941 3 -     27784 gca
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        241534 3 -    344369 GGA
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13243057 3 -  17261082 gcA
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             601011 3 -   3946241 gcA
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131530780 3 - 161321710 gca
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             25812 3 +     56732 GAA
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6802302 3 +   6970761 GAA
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             1694 3 +     18040 GAA
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                12888 3 +     68503 GCA
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13911171 3 +  90463843 TAA
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1784658 3 +   2252614 cTA
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           12249 3 -     14454 GAA
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206373575 3 - 206558726 GAA
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44851223 3 -  45163003 GAA
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                16360 3 +    109198 GCA
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       4666 3 +     12214 GCA
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15669015 3 -  43202129 GAA
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                         890 3 +     34089 GAA
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                               821 3 -     60842 GAA
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                               890 3 +     67014 GAA
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                               890 3 +     60816 GAA
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                  818 3 -     76454 GAA
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17337398 3 -  30362882 GAA
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         16999 3 -     62485 GAA
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   28434 3 -    114521 GCA
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1527475                       24237 3 +     26421 GAA
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       4699 3 +     20762 GAA
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         38432 3 +     40653 GAA
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                            8991 3 -     12194 GAA
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     22410 3 -     27512 GAA
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         31431 3 -     33692 GAA
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   94459 3 -    120886 TAA
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            14656 3 +    739146 GCA
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2236314 3 +   2842873 GAA
i Spermophilus_dauricus.KZ294190.1                      C 0 I 110
s Spilogale_gracilis.SpiGra_flattened_line_905             231244 3 -    276980 GTA
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            24028 3 +     62062 GCA
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189268955 3 + 218635234 GCA
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                     13898361 3 +  13920577 GAA
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               2871 3 -      6213 GCA
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               11809 3 +     45698 ACA
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      803807 3 +   1148477 GCA
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  54469 3 +     99546 GCA
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               23149 3 +     42269 GAA
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               56463 3 +     65473 GAA
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194003731 3 - 194193292 GAA
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                   675 3 +      6782 GCA
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  132946 3 -    259118 GCA
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        22809 3 +     38948 GAA
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   16536 3 -     32910 GAA
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       22434 3 +     24652 GAA
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      1319 3 -      3559 GAA
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           39258 3 -     54611 GAA
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       15257 3 +     17312 GAA
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    22627 3 -     25040 GAA
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          1293 3 +      3528 GAA
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  47655 3 +     51589 GAA
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       10823 3 +     14732 GAA
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       1301 3 -     28054 GAA
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44656096 3 -  44834318 GAA
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        1106 3 +      3372 GAA
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   2297 3 +     90398 GCA
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16078396 3 +  31416278 GCA
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2788232 3 -   3938065 gca
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                     793 3 +     13056 GCA
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69310421 3 -  96451834 GCA
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 23621 3 -     25548 GCA
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6511049 3 +  28682327 GCA
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  1961 3 -     20643 GAA
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             21506 3 -     33872 GAA
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1521740 3 -   2331223 GCA
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                134203 3 -    281493 GCA
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       123511 3 -    134049 GAA
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        210727 3 -    227762 GCA
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           3924 3 -      8775 GCA
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Perognathus_longimembris.PerPac_flattened_line_22291      39705 3 -     45160 I
e Dipodomys_stephensi.DipSte_scaffold_44365                 23717 3 +     28912 I
e Dipodomys_ordii.KN672545.1                              3652163 3 +   4240102 I
e Chrysochloris_asiatica.ChrAsi_scaffold_141308              5625 53 -     12508 M
e Megaderma_lyra.MegLyr_scaffold_3562                       61508 0 -    234502 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16291 1 -    119109 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     12283 2 -     20485 I
e Jaculus_jaculus.JH725517.1                              8561873 2 +  11848649 I
e Hylobates_pileatus_b.LG03                                     92553610 0 - 189753342 C
e Allactaga_bullata.AllBul_scaffold_70162                    8911 2 -     22067 I
e Nannospalax_galili.KL201303.1                            107449 0 +    362372 C
e Dolichotis_patagonum.DolPat_scaffold_14102                33375 0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             56104 16 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                14631 16 +     26546 I
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 27150 0 -     67205 C
e Cricetulus_griseus.LT883672.1                          53025429 0 +  72327488 C
e Cavia_tschudii.CavTsc_scaffold_488                       173989 0 +    436027 C
e Cavia_porcellus.DS562889.1                             15795798 0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15783848 16 -  24422027 I
e Arctocebus_calabarensis.k141_1161114                      14526 30 +     17483 I

a score=0.000000
s hg38.chr4_GL000008v2_random                                8349 19 +    209709 ATATGG---TTC--A------TAT-T-TTT-A-----T
s Acinonyx_jubatus.LLWD01000356.1                         2030443 19 +   3721120 atAAGG---CTC--A------TAC-T-TTT-A-----T
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    108707 20 -    189883 TTATAG---CTC--A------TAA-TTTTT-T-----A
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 I 1
s Ailuropoda_melanoleuca.LNAT01000321.1                  10653777  9 +  23371972 ACGTGG---CTC--------------------------
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 I 2
s Ailurus_fulgens.LNAC01000003.1                          7090478  9 -  16596857 ACGTGG---CTC--------------------------
i Ailurus_fulgens.LNAC01000003.1                        C 0 I 2
s Allenopithecus_nigroviridis.k141_3103707                  59372 19 +     61638 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        51180 19 +     53391 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         1904 19 +     72529 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          1480 19 +      3797 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             6573 19 -     18050 ATATGG---CTT--A------TAT-T-TTT-A-----C
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  7690 19 -     11521 ATATGG---CTT--A------TAT-T-TTT-A-----C
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              7248 19 -     21359 ATATGG---CTT--A------TAT-T-TTT-A-----C
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1856473                                5631 19 +      7227 ATATGG---CTT--A------TAT-T-TTT-A-----C
i Alouatta_juara.k141_1856473                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          6545 19 -     10438 ATATGG---CTT--A------TAT-T-TTT-A-----C
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            3200 19 +      7047 ATATGG---CTT--A------TAT-T-TTT-A-----C
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             6484 19 +     10410 ATATGG---CTT--A------TAT-T-TTT-A-----C
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1374428                             287 19 -     25526 ATATGG---CTT--A------TAT-T-TTT-A-----C
i Alouatta_puruensis.k141_1374428                       C 0 I 7
s Alouatta_seniculus.k141_990213                             3205 19 +      6429 ATATGG---CTT--A------TAT-T-TTT-A-----C
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3517212 19 +   4113121 ATAAGG---ctc--a------tat-a-ttt-a-----t
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      387397 19 -    631301 ATATGG---CTC--A------TAA-T-TTT-A-----T
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            27845 19 +     33004 ATAAGG---CTT--A------TAT-A-TTT-G-----T
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 58879 19 +     78111 ATATGG---CTT--A------TAT-T-TTT-A-----C
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            1810 19 +     22701 ATATGG---CTT--A------TAT-T-TTT-A-----C
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5745770 19 +   9889416 atatgg---ctt--a------tat-t-ttt-a-----c
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             2362 19 -    104377 ATATGG---CTT--A------TAT-T-TTT-A-----C
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               2362 19 +     23246 ATATGG---CTT--A------TAT-T-TTT-A-----C
i Aotus_vociferans.k141_718647                          C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 5496 19 -     29036 ATGTGG---CTC--A------TAA-T-TTT-A-----T
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9535623 19 +  39197703 ATATGG---CTT--A------TAT-T-TTT-A-----C
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             56911 19 +     85812 ATGTGG---CTT--A------TAT-T-TTT-A-----C
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 7908 19 +     89302 ATGTGG---CTT--A------TAT-T-TTT-A-----C
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             12417 19 -     58268 ATATGG---CTT--A------TAT-T-TTT-A-----C
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             60405 19 +    119057 ATGTGG---CTT--A------TAT-T-TTT-A-----C
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               2355 19 -     25888 ATGTGG---CTT--A------TAT-T-TTT-A-----C
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 3211 19 -     16375 ATATGG---CTC--A------TAT-T-TTT-A-----T
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_767228                               9183 19 -      9688 ATATGG---CTC--A------TAT-T-TTT-A-----T
i Avahi_peyrierasi.k141_767228                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26377151 16 +  51448160 ATG------CTC--A------TAt-t-ttt-a-----t
i Balaenoptera_acutorostrata.KI537095.1                 I 2 C 0
s Balaenoptera_bonaerensis.DF502048.1                        2382 16 -     13118 ATG------CTC--A------TAt-t-ttt-a-----t
i Balaenoptera_bonaerensis.DF502048.1                   I 2 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   40312 19 -     72089 ATAAGG---CTC--A------TAT-A-TTT-A-----T
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6556459 19 +   6870073 ATAAGC---CTC--A------TAT-A-TTT-A-----T
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138136690 19 - 161108492 ATAAGC---CTC--A------TAT-A-TTT-A-----T
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     569068 19 -    998990 ATAAGC---CTC--A------TAT-A-TTT-A-----T
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136292423 19 - 158972876 ATAAGC---CTC--A------TAT-A-TTT-A-----T
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1228044 19 -   1914593 ATAAGC---CTC--A------TAT-A-TTT-A-----T
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               110253 19 -    171031 ATATGG---ATT--A------TAT-T-TTT-A-----T
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                  9279 19 +    125063 ATATGG---ATT--A------TAT-T-TTT-A-----T
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                11327 19 -    216513 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        3866 19 -    134917 ATATGG---ATT--A------TAT-T-TTT-A-----T
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3216181 19 -   8989139 ATATGG---CTT--A------TAT-T-TTC-A-----T
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           394365 19 -  15254737 ATATGG---CTT--A------TAT-T-TTC-A-----T
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2970102 19 +   6889770 ATATGG---CTT--A------TAT-T-TTC-A-----T
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11515161  9 +  39901454 ATATAG---CTC--------------------------
i CanFam4.chr31                                         C 0 I 2
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   10178  9 +     87036 ATATAG---CTC--------------------------
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 I 2
s Canis_lupus_dingo.QKWQ01001993.1                       11261820  9 -  35597290 ATATAG---CTC--------------------------
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 I 2
s Canis_lupus_familiaris.chr31                           11084349  9 +  39895921 ATATAG---CTC--------------------------
i Canis_lupus_familiaris.chr31                          C 0 I 2
s Canis_lupus_orion.HG994411.1                           16451383  9 -  44759192 ATATAG---CTC--------------------------
i Canis_lupus_orion.HG994411.1                          C 0 I 2
s Capra_aegagrus.CM003214.1                              21322319 19 + 157394656 ATAAGG---ctc--a------tat-a-ttt-a-----t
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135703546 19 - 157403528 ATAAGG---ctc--a------tat-a-ttt-a-----t
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_647363                  1079 20 +      1887 ATATGA---C----A----CATAGTA-GTC-A-----T
i Capromys_pilorides.CapPil_scaffold_647363             C 0 C 0
s Carlito_syrichta.NW_007248099.1                          305662 19 +    345090 ATATgg---ctt--g------tat-t-ttt-a-----t
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               56574 19 +     67245 ATATGG---CTC--A------TAA-T-TTT-A-----T
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   27092 21 +     33760 ATAATA---CCA--T----GCAAG-G-TTT-A-----T
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   155895 15 -    276539 AGATGG---CTC--A--------T-T-TTT--------
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18887092 19 -  29618158 ATATGG---CTT--A------TAT-T-TTT-A-----C
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 4638 19 -     26817 ATATGG---CTT--A------TAT-T-TTT-A-----C
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                 8878 19 +     25043 ATATGG---CTT--A------TAT-T-TTT-A-----C
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         4711 19 +     21754 ATATGG---CTT--G------TAT-T-TTC-A-----T
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4360361 17 +   7569818 ATATGG---CTC--A--------T-T-TTT-A-----T
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_520758          363 17 -       446 ATATGG---CTC--A--------T-T-TTT-A-----T
i Ceratotherium_simum_cottoni.CerCot_scaffold_520758    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6551168 19 +   6739814 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      52645 19 -     54931 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         17629 19 -     19697 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         55160 19 -    107033 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        1603 19 -      3853 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          25535 19 +     30494 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           1558 19 -      4022 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          1450 19 -      3505 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           20256 19 +     35983 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11986778 19 +  12117833 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46473531 19 +  46592721 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      31358 19 +     33420 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        1394 19 -      3443 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      2385 19 -      4669 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        2186 19 -      4411 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         1709 19 -      4205 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           55547 19 -     68416 ATATGG---CTC--A------TAT-T-TTC-A-----T
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            4596 19 +     13308 ATATGG---CTC--A------TAT-T-TTC-A-----T
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             1891 19 -     18223 ATATGG---CTT--A------TAT-T-TTT-A-----T
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             18914 19 +     25473 ATATGG---CTT--A------TAT-T-TTT-A-----T
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           37953 19 +     57117 ATATGG---CTT--A------TAT-T-TTT-A-----T
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          42628 19 +     54541 ATATGG---CTT--A------TAT-T-TTT-A-----T
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15958045 18 +  43084221 atatga---c----a------tattt-ttc-a-----t
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         67474 19 +    196370 ATATGG---ATT--A------TAT-T-TTT-A-----T
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          11648 19 +     40510 ATATGG---ATT--A------TAT-T-TTT-A-----T
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15134989 19 -  15256731 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      30035 19 -     53260 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101140483 19 + 101219884 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                13574 17 -     21363 ATATTG---CCC--A------TAT-T-C---A-----T
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           758880 17 +    964067 ATATTG---CCC--A------TAT-T-C---A-----T
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10879065 19 +  10971483 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147660224 19 + 156195979 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            12209 19 +     23629 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60609841  9 +  78930452 ATAGCA---ATC--------------------------
i Condylura_cristata.JH655880.1                         C 0 I 6
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         36280 19 -     40477 ATATGC---CTC--A------AAT-T-CGT-A-----T
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 274149 19 -    399297 CTATAG---TTT--A------TAT-T-TCT-T-----C
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 I 1
s Crocidura_indochinensis.CroInd_scaffold_38409             15794 19 -     19186 CTATGG---TTC--A------TAT-T-CTT-A-----T
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            48470 19 -     70449 ATATGG---CTC--A------TAC-T-TTT-A-----T
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  204883 18 -    956709 TTATGG---CTC--T-------GT-T-TTT-A-----A
i Ctenodactylus_gundi.CteGun_scaffold_447               I 2 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 27150 18 -     67205 CTGTGA---C----A------TAGTT-TTC-A-----T
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          178749 17 -   6883506 GTATTg---ctc--a------tat-t-t---a-----t
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16841421 19 +  31942871 ATATGG---CTT--G------TGT-T-TTT-A-----T
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80033888 19 -  96802777 ATA---TGGCTC--A------TAt-t-ttt-a-----t
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18695884 19 -  18957592 ATATGg---ctt--a------taa-t-ttc-a-----t
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 319018 17 +    993696 ATATGG---CTC--A--------T-T-TTT-A-----T
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_170113                  281 17 +       818 ATATGG---CTC--A--------T-T-TTT-A-----T
i Diceros_bicornis.DicBicMic_scaffold_170113            C 0 C 0
s Echinops_telfairi.JH980316.1                           22991158 14 -  44670279 ATAGTC---TTA--A------TAT-T------------
i Echinops_telfairi.JH980316.1                          C 0 I 1
s Eidolon_helvum.KE772537.1                                  9267 19 +     24177 ATATgg---ctc--a------tat-t-ttt-a-----t
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1488582 19 +   1727528 GTAAGA---CTC--A------TAT-A-TTT-A-----T
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7803313 21 +  15467074 attaaa-tgtTC--A------TAT-T-TAC-A-----T
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        235795 19 -    369425 CTATAG---CTC--A------TAA-T-TTT-T-----T
i Ellobius_lutescens.LOEQ01003611.1                     C 0 I 1
s Ellobius_talpinus.LOJH01090055.1                           2803 19 -      7838 CTATAG---CTC--A------TAA-T-TTT-T-----T
i Ellobius_talpinus.LOJH01090055.1                      C 0 I 1
s Enhydra_lutris.KZ291749.1                              85867269  9 +  99434291 ATGTGG---CTC--------------------------
i Enhydra_lutris.KZ291749.1                             C 0 I 2
s Equus_asinus.JREZ01000062.1                             5849748 17 -   7175178 ATATGG---CTC--A--------T-T-TTT-A-----T
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13348251 17 +  41866177 ATATGG---CTC--A--------T-T-TTT-A-----T
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                           9741 17 +     92910 ATATGG---CTC--A--------T-T-TTT-A-----T
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erythrocebus_patas.Contig8                             48767168 19 -  48907691 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          312035 16 +    330699 ATG------CTC--A------TAT-T-TTT-A-----T
i Eschrichtius_robustus.EscRob_flattened_line_685       I 2 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             58464 16 +     89355 ATG------CTC--A------TAT-T-TTT-A-----T
i Eubalaena_japonica.EubJap_flattened_line_7756         I 2 C 0
s Eulemur_albifrons.k141_715837                              1618 19 +     13586 ATATGG---CTC--A------TAT-T-TTT-A-----T
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               1554 19 -      6809 ATATGG---CTC--A------TAT-T-TTT-A-----T
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             8025 19 +     36558 ATATGG---CTC--A------TAT-T-TTT-A-----T
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             4342 19 +     60246 ATATGG---CTC--A------TAT-T-TTT-A-----T
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 7830 19 +    109717 ATATGG---CTC--A------TAT-T-TTT-A-----T
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               12204 19 +     16540 ATATGG---CTC--A------TAT-T-TTT-A-----T
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                12481 19 +     27497 ATATGG---CTC--A------TAT-T-TTT-A-----T
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           14937 19 +     26808 ATATGG---CTC--A------TAT-T-TTT-A-----T
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                29671 19 +     46535 ATATGG---CTC--A------TAT-T-TTT-A-----T
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              12394 19 -     29447 ATATGG---CTC--A------TAT-T-TTT-A-----T
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129889423 19 - 159252932 atAAGG---CTC--A------TAC-T-TTT-A-----T
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129276497 19 - 158578461 atAAGG---CTC--A------TAC-T-TTT-A-----T
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 17632 19 +     52776 ATAAGG---CTC--A------TAC-T-TTT-A-----T
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13889629 20 -  19261668 ACATGA---CTG--A------TATTT-TTC-A-----T
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     207567 19 -    847004 ATATAG---CTC--A------TAT-T-TTT-C-----T
i Galago_moholi.ctg555                                  I 1 C 0
s Galago_senegalensis.k141_964197                            9947 19 -     43889 ATATAG---CTC--A------TAT-T-TTT-A-----T
i Galago_senegalensis.k141_964197                       I 1 C 0
s Galagoides_demidoff.k141_1769638                           6996 19 +     27357 ATATAG---CTC--A------TAT-T-TTT-A-----T
i Galagoides_demidoff.k141_1769638                      I 1 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               152880 19 +    324696 ATGTGG---CTC--A------CAT-T-TCT-A-----T
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    178095 19 -    189561 ATAAGG---CTC--A------TAT-A-TTT-A-----T
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                            9289 19 -     18683 ATATGG---CTC--C------TAC-T-TTT-A-----T
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               1742 19 -     14630 ATATAG---CTC--A------TAT-T-TTT-A-----T
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119648840 19 - 195582420 ATATAG---CTC--A------TAT-T-TTT-A-----T
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   73846 19 +    118900 ATGTGG---CTC--T------TAC-T-TTT-A-----T
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                         2165 19 +      3980 ATATGG---CTT--A------TAT-T-TTT-A-----T
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             24645 19 +     26611 ATATGG---CTT--A------TAT-T-TTT-A-----T
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             2099 19 +     56096 ATATGG---CTT--A------TAT-T-TTT-A-----T
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        25372 19 -     42470 ATATGG---CTT--A------TAT-T-TTT-A-----T
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        41969 19 -     54384 ATATGG---CTT--A------TAT-T-TTT-A-----T
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              13674 19 +     53719 ATATGG---CTC--A------TAC-T-TTT-A-----T
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                24581 19 -     91191 ATAAGG---CTC--A------TAT-A-TTT-A-----T
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2547740 20 +  31725842 ATATTA---CTC--A------TATTT-CTC-T-----T
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               53150 19 +     73687 ATAGTG---TTC--A------TAT-T-TGC-A-----T
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              144158 16 +    277961 ATA------CTC--A------TAT-T-TTT-A-----T
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      275578 19 -    477199 ACATGg---ctc--a------tat-t-ttt-a-----t
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              4732 19 -      9143 ACATGG---CTC--A------TAT-T-TTT-A-----T
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg2145                                     688 29 -      4981 gtgagg---ttc--aactctg-gt-a-gtt-ggataca
i Hoolock_leuconedys.ctg2145                               n 19 I 325
s Hyaena_hyaena.HyaHya_flattened_line_20729                 12742 19 -     67322 ATACGG---CTC--A------TAC-T-TTT-A-----T
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hylobates_abbotti.k141_493872                              1551 19 +      5897 ATATGG---TTC--A------TAT-T-TTT-A-----T
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_282275                                764 19 +      1846 ATATGG---TTC--A------TAT-T-TTT-A-----T
i Hylobates_agilis.k141_282275                          C 0 C 0
s Hylobates_klossii.k141_466549                              8009 19 +     11537 ATATGG---TTC--A------TAT-T-TTT-A-----C
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.LG03                                     92553610  1 - 189753342 ---------------------------t----------
i Hylobates_pileatus_b.LG03                                    C 0 N 0
s Hylobates_muelleri.k141_1133650                             986 19 -      2775 ATATGG---TTC--A------TAT-T-TTT-A-----T
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             29588 19 -     60944 ATATGG---TTC--A------TAT-T-TTT-A-----T
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     2710 20 +     22540 ATATGA---CTC--A------TATTT-TTC-A-----T
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7122503 19 +  13083262 atatgg---ttc--a------tat-a-ttt-a-----t
i Ictidomys_tridecemlineatus.JH393315.1                 I 112 C 0
s Indri_indri.k141_3334527                                   8609 19 +      9207 ATATGG---CTC--A------TAT-T-TTT-G-----T
i Indri_indri.k141_3334527                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               5815 19 +     17520 ATA---TGGCTC--A------TAT-T-TTT-A-----T
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               20647 19 +     37189 ATA---TGGCTC--A------TAT-T-TTT-A-----T
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          46466 19 -    147782 ACATGG---CTT--A------TAT-T-TTT-A-----C
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   110760 19 -    115756 ATATAG---CTC--A------TAA-T-TTT-A-----T
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258403648 19 - 285822530 ATATGG---CTC--T------TAT-T-TTT-A-----T
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        20542 19 +     39228 ATATGG---CTC--A------TAT-T-TTT-A-----T
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            49918 19 +     63517 ATATGG---CTC--A------TAT-T-TTT-A-----T
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        75138 19 +    116806 ATATGG---CTC--A------TAT-T-TTT-A-----T
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     28179 19 -     33031 ATATGG---CTC--A------TAT-T-TTT-A-----T
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                     9661  8 +     22452 ----------------------AT-C-TTT-T-----T
i Lepus_americanus.LepAme_scaffold_62849                I 9 C 0
s Leptonychotes_weddellii.KB714749.1                      3082445  9 -   3498232 GTGTGG---CTC--------------------------
i Leptonychotes_weddellii.KB714749.1                    C 0 I 2
s Lipotes_vexillifer.KE558548.1                            132990 19 +   3060487 ATA---TGGCTC--A------TAt-t-ttt-a-----t
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19244254 19 +  19376315 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            7292 19 +     84689 ATATAG---CTC--A------TAT-T-TTT-A-----C
i Loris_lydekkerianus.k141_550999                       I 1 C 0
s Loris_tardigradus.ctg97                                 3775043 19 +   6799190 ATATAG---CTC--A------TAT-T-TTT-A-----C
i Loris_tardigradus.ctg97                               I 1 C 0
s Loxodonta_africana.GL010040.1                          20587724 19 -  62548349 ATAGCA---TTC--A------TAT-T-TAC-A-----T
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11083805  9 +  39895028 ATATAG---CTC--------------------------
i Lycaon_pictus.CM007556.1                              C 0 I 2
s Macaca_arctoides.k141_2201161                             15940 19 +     74745 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12702446 19 +  12821369 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               4539 19 +      6569 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           42839 19 +     63263 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_1068107                               11416 19 +     12679 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                 989 19 +      3017 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  42601 19 -     79256 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196031521 19 + 196197964 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11441625 19 +  11645122 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   1551 19 -     46448 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                1378 19 -      3617 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 11711 19 -     55006 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43836750 19 +  43892939 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                3973 19 -      5978 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               1553 19 -     27140 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43433414 19 -  43563597 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4446240 19 -   4543643 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            143057 19 +    252755 ATATGg---ctc--a------tat-t-ttt-a-----t
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             33121 19 +     58827 ATATGg---ctc--a------tat-t-ttt-a-----t
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36870350 19 +  64221397 atatgg---ttc--a------tat-a-ttt-a-----t
i Marmota_marmota.CZRN01000005.1                        I 112 C 0
s Mellivora_capensis.MelCap_flattened_line_1828            224802  9 -    226874 ACGTGG---CTC--------------------------
i Mellivora_capensis.MelCap_flattened_line_1828         C 0 I 2
s Meriones_unguiculatus.MerUng_scaffold_52233                8163 20 +     15977 TTATAG---CTC--A------TAA-TTTTT-T-----T
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 I 1
s Mesocricetus_auratus.KB708139.1                         1043061 12 -  26018355 CTAtag---ttc--a------ta---------------
i Mesocricetus_auratus.KB708139.1                       C 0 I 6
s Mesoplodon_bidens.MesBid_scaffold_183284                    686 19 +      2166 ATA---TGGCTC--A------TAT-T-TTT-A-----T
i Mesoplodon_bidens.MesBid_scaffold_183284              C 0 C 0
s Microcebus_murinus.CM007691.1                          16506763 19 +  47401472 ATacag---ctt--a------tat-t-ttt-a-----a
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  28100 19 -     48017 ATAGTC---TTA--A------AAT-G-TAT-G-----T
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               19733 19 -     32043 GTATGG---CTC--A------CAA-T-TTT-A-----T
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22815450 19 -  98408828 CTATAG---CTC--A------TGA-T-NNN-N-----N
i Microtus_ochrogaster.CM001673.1                       C 0 I 493
s Miniopterus_natalensis.LDJU01000022.1                   8206452 19 +  10048721 ATATGG---CTC--A------TAT-T-TGT-A-----T
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            31133 19 +     45743 ATATGG---CTC--A------TAT-T-TGT-A-----T
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        32088 19 +     34273 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         7743  9 -    104932 GTGTGG---CTC--------------------------
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 I 2
s Mirza_zaza.k141_226143                                     2177 19 +      8497 ATATGG---CTC--A------TAT-T-TTT-A-----T
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 143413 19 +    154973 ATA---TGGCTC--A------TAT-T-TTT-A-----T
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                158053 19 +    265003 ATATGG---CTC--A------TAT-T-TTT-A-----T
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 1680 19 -      4346 ATAAGG---CTC--A------TAT-A-TTT-A-----T
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  141364 19 -    168139 ATATGG---CTC--A------TAC-T-TTT-A-----T
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          16269 19 -    100666 ATATAG---CTC--A------TTA-T-TTT-A-----T
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70761809 12 +  92629107 TAATAG---CTC--A------TA---------------
i Mus_caroli.LT608236.1                                 C 0 I 7
s Mus_musculus.chr16                                     75484931 20 +  98207768 TAATAG---CTC--A------TAA-TTTTT-T-----T
i Mus_musculus.chr16                                    C 0 I 1
s Mus_pahari.LT608305.1                                  67549247 20 +  89017189 CAATAG---CTC--A------TAA-GTTTT-T-----A
i Mus_pahari.LT608305.1                                 C 0 I 1
s Mus_spretus.CM004110.1                                 74324350 20 +  97876770 TAATAG---ctc--a------taa-ttttt-t-----t
i Mus_spretus.CM004110.1                                C 0 I 1
s Muscardinus_avellanarius.MusAve_scaffold_9643              7800 19 +     98495 ACATAG---CTT--T------CAT-T-TTT-A-----T
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4419678  9 -  28371801 CCATGG---CTC--------------------------
i Mustela_putorius.JH417978.1                           C 0 I 2
s Myocastor_coypus.MyoCoy_scaffold_3653                     86772 18 -    117718 ATATGA---C----A-----C-AGTT-TTC-A-----T
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               964596 19 +   8389877 ATATAG---ctc--a------taa-t-ttt-a-----t
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5016273 19 +   6462685 ATATAG---ctc--a------taa-t-ttt-a-----t
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3462182 19 -   3747815 ATATAG---ctc--a------taa-t-ttt-a-----t
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         7379 19 +     66751 ATATAG---CTC--A------TAA-T-TTT-A-----T
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             2134 17 -      8794 GTGTTG---CTT--A------TGT-T-T---A-----T
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nasalis_larvatus.k141_153429                               4453 19 +     48152 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4481344  9 -  14209539 GTGTGG---CTC--------------------------
i Neomonachus_schauinslandi.NINY01007774.1              C 0 I 2
s Neophocaena_asiaeorientalis.KZ688543.1                  3948022 19 -   4490290 ATA---TGGCTC--A------TAt-t-ttt-a-----t
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  46383 19 +     94413 ATATGG---CTC--A------TAT-T-TTT-A-----T
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1223136                          10220 19 -     11253 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Nomascus_annamensis.k141_1223136                      C 0 C 0
s Nomascus_concolor.k141_190193                               476 19 -      1094 ATATGG---CTC--A------TAT-T-TTT-C-----T
i Nomascus_concolor.k141_190193                         I 17 C 0
s Nomascus_gabriellae.k141_906566                             852 19 -      2544 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             21326 19 -  18771707 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Nomascus_siki_b.tarseq_80                         C 0 I 7
s Nomascus_siki_a.k141_844529                                   601 19 +      2124 ATATGG---CTC--A------TAT-T-TTT-C-----T
i Nomascus_siki_a.k141_844529                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                26801  9 +   3668941 ATATAG---CTC--------------------------
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 I 2
s Nycticebus_bengalensis.LG16                            65563622 19 -  95554990 ATATAG---CTC--A------TAT-T-TTT-A-----C
i Nycticebus_bengalensis.LG16                           I 1 C 0
s Nycticebus_coucang.k141_2051882                             467 19 +      6470 ATATAG---CTC--A------TAT-T-TTT-A-----C
i Nycticebus_coucang.k141_2051882                       I 1 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65665991 19 +  89412551 ATATAG---CTC--A------TAT-T-TTT-A-----C
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     I 1 C 0
s Ochotona_princeps.JH802095.1                            4992313 19 -  23139505 GTATCG---TTC--C------TAT-T-TTT-C-----T
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3675502 20 +  10294119 ATATAA---C--ACA------CAGTT-TTC-A-----T
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             676002  9 -   3126709 GTGTGG---CTC--------------------------
i Odobenus_rosmarus.KB229369.1                          C 0 I 2
s Odocoileus_virginianus.KZ101650.1                       1076805 19 +   1425656 ataaga---ctc--a------gat-a-ttT-A-----T
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         33967 19 +     78940 ATAAGG---CTC--A------TAT-A-TTT-A-----T
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  121273 19 +    145789 CTATAG---CTC--A------TAA-T-GTT-T-----T
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 I 1
s Onychomys_torridus.OnyTor_scaffold_12578                  33224 20 +     62360 CTGTAG---CTC--A------TAA-TTTTT-T-----T
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 I 1
s Orcinus_orca.KB316965.1                                 7221706 19 -   7562323 ATA---TGGCTC--A------TAt-t-ttt-a-----t
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              39959 19 -     66828 ATAAAA---TTC--A------TAT-T-TAT-A-----T
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141872310  8 + 163896628 ----------------------AT-T-TTT-T-----T
i Oryctolagus_cuniculus.CM000803.1                      I 9 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      304136  9 -    505867 atATAG---CTC--------------------------
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 I 2
s Otolemur_crassicaudatus.k141_321880                       35635 19 +     38679 ATATAG---CTC--A------TAT-T-TTT-A-----T
i Otolemur_crassicaudatus.k141_321880                   I 1 C 0
s Otolemur_garnettii.GL873528.1                          18005076 19 -  38779656 atatag---ctc--a------tat-t-ttt-a-----t
i Otolemur_garnettii.GL873528.1                         I 1 C 0
s Ovis_aries.CM001582.2                                 134074383 19 - 275406953 ATAAGg---ctc--a------tat-a-ttt-a-----t
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      75597 19 +    140051 ATAAGG---CTC--A------TAT-A-TTT-A-----T
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127571084 19 - 205426864 ATATGG---CTC--A------TAT-T-TTT-A-----T
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120148231 19 - 196562556 ATATGG---CTC--A------TAT-T-TTT-A-----T
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  30586 19 +    295523 ATAAGG---CTC--A------TAC-T-TTT-A-----T
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3634190 19 +  18214204 atAAGG---CTC--A------TAC-T-TTT-A-----T
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5023967 19 -   6340057 atAAGG---CTC--A------TAC-T-TTT-A-----T
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1063241 19 -   1292953 ATAAGg---ctc--a------tat-a-ttt-a-----t
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188152199 19 - 188283584 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            48411 19 +     76494 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47509595 19 +  47705337 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 63578 19 -    104429 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  13362 19 -     29451 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                33767 19 +     35859 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    111918 19 -    135482 ATATGG---CTC--A------TAC-C-CTT-A-----T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           1863 19 -     23713 ATATAG---CTC--A------AAT-T-TTT-A-----T
i Perodicticus_ibeanus.k141_117958                      I 1 C 0
s Perodicticus_potto.k141_713187                            21160 19 -     27972 ATATAG---CTC--A------TAT-T-TTT-A-----T
i Perodicticus_potto.k141_713187                        I 1 C 0
s Peromyscus_maniculatus.KI615518.1                       4946396 20 -   8017169 CTGTAg---ctc--a------taa-ttttt-t-----t
i Peromyscus_maniculatus.KI615518.1                     C 0 I 1
s Phocoena_phocoena.PhoPho_flattened_line_11948            118323 19 -    122454 ATA---TGGCTC--A------TAT-T-TTT-A-----T
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           1454 19 -      3310 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       21360 19 -     82327 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           18111 19 +     19957 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26736120 19 +  26888534 ATATGG---atc--a------tat-t-ttt-a-----t
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            93368 19 +    112873 AAATAG---CTC--A------TAA-T-TTT-A-----T
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             39966 19 -     61926 ATATGG---CTT--A------TAT-T-TTT-A-----T
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        21395 19 +     78826 ATATGG---CTT--A------TAT-T-TTT-A-----T
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              5346 19 -     15800 ATATGG---CTT--A------TAT-T-TTT-A-----T
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                         8544 19 -     16101 ATATGG---CTT--A------TAT-T-TTT-A-----T
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          1853 19 +      9673 ATATGG---CTT--A------TAT-T-TTT-A-----T
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13470847 19 -  19735023 ATATGG---CTT--A------TAT-T-TTT-A-----T
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                            9755 19 -     31692 ATATGG---CTT--A------TAT-T-TTT-A-----T
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           2390 19 +     21690 ATA---TGGCTC--G------TAT-T-TTT-A-----A
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       19147 19 +     44506 ATATAA---CTT--A------TAT-T-TTT-A-----C
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        19365 19 +     67491 ATATAG---CTT--A------TAT-T-TTT-A-----C
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                       9610 19 -     98129 ATATAG---CTT--A------TAT-T-TTT-A-----C
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     19210 19 +    147771 ATATAG---CTT--A------TAT-T-TTT-A-----C
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        19461 19 -     23762 ATATAG---CTT--A------TAT-T-TTT-A-----C
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_2078842                         19409 19 -     19696 ATATAG---CTT--A------TAT-T-TTT-A-----C
i Plecturocebus_dubius.k141_2078842                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         19283 19 +    152463 ATATAG---CTT--A------TAT-T-TTT-A-----C
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      6040 19 +      8943 ATATAG---CTT--A------TAT-T-TTT-A-----C
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                          9000 19 +    134592 ATATAG---CTT--A------CAT-T-TTT-A-----C
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          19593 19 -     75465 ATATAG---CTT--A------TAT-T-TTT-A-----C
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              183637 19 -    373494 ACATGG---CTC--A------TAT-T-TTT-A-----T
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19803541 19 +  19899266 ATATGG---CTC--A------TAT-T-TTT-A-----T
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               1690 19 -     15069 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              1824 19 +     14865 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                73014 19 +     78963 ATAGTG---TTC--A------TAT-T-TGC-A-----T
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6845021 19 +  12164890 ATATgg---ctc--a------tat-t-ttt-a-----t
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     13456 19 -     30946 ATATGG---GTC--A------TAC-T-TTT-A-----T
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                          162 18 +     11805 AT-TGG---CTC--A------TAT-T-TTT-A-----T
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           39491 18 +     52369 AT-TGG---CTC--A------TAT-T-TTT-A-----T
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         31880 18 -     44753 AT-TGG---CTC--A------TAT-T-TTA-A-----T
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            13802 18 +     27322 AT-TGG---CTC--A------TAT-T-TTA-A-----T
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       13446 18 -     53241 AT-TGG---CTC--A------TAT-T-TTT-A-----T
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         35717 19 -     48185 ATATGG---GTC--A------TAC-T-TTT-A-----T
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           29232 19 +     77221 TTATAG---CTC--A------TAA-TTTTT-T------
i Psammomys_obesus.NESX01026517.1                       C 0 I 1
s Pteronotus_parnellii.KE867983.1                             944 19 -     27784 ATACgg---ctc--a------tat-t-ttt-a-----t
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        241537  9 -    344369 ATGTGG---CTC--------------------------
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 I 2
s Pteropus_alecto.KB031157.1                             13243060 19 -  17261082 ATATgg---ctc--a------tat-t-ttt-a-----t
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             601014 19 -   3946241 ATATgg---ctc--a------tat-t-ttt-a-----t
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131530783 19 - 161321710 atAAGG---CTC--A------TAC-T-TTT-A-----T
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             25815 19 +     56732 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6802305 19 +   6970761 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             1697 19 +     18040 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                12891 19 +     68503 ATAAGA---CTC--A------AAT-A-TTT-A-----T
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13911174 19 +  90463843 CAATAg---ctc--a------aaa-tt-tt-t-----a
i Rattus_norvegicus.chr11                               C 0 I 1
s Rhinolophus_sinicus.LVEH01000179.1                      1784661 19 +   2252614 ATATGG---ctc--a------tat-t-ttt-a-----t
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           12252 19 -     14454 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206373578 19 - 206558726 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44851226 19 -  45163003 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                16363 19 +    109198 ATATGG---CTC--A------TAT-T-TTT-A-----T
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       4669 19 +     12214 ATAAGG---CTC--A------TAT-A-TTT-A-----T
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15669018 19 -  43202129 ATATGg---ctt--a------tat-t-ttt-a-----c
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                         893 19 +     34089 ATATGG---CTT--A------TAT-T-TTT-A-----C
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                               824 19 -     60842 ATATGG---CTT--A------TAT-T-TTT-A-----C
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                               893 19 +     67014 ATATGG---CTT--A------TAT-T-TTT-A-----C
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                               893 19 +     60816 ATATGG---CTT--A------TAT-T-TTT-A-----C
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                  821 19 -     76454 ATATGG---CTT--A------TAT-T-TTT-A-----C
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17337401 19 -  30362882 ATATGG---CTT--A------TAT-T-TTT-A-----C
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         17002 19 -     62485 ATATGG---CTT--A------TAT-T-TTT-A-----C
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   28437  9 -    114521 ACAGCA---ATT--------------------------
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 I 6
s Semnopithecus_entellus.k141_1527475                       24240 19 +     26421 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       4702 19 +     20762 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         38435 19 +     40653 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                            8994 19 -     12194 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     22413 19 -     27512 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         31434 19 -     33692 ATATGG---ATC--A------TAG-T-TTT-A-----T
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   94462 19 -    120886 ACATAG---CCA--A------AAC-A-TTT-T-----T
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 I 1
s Solenodon_paradoxus.SolPar_flattened_line_1012            14659 19 +    739146 ATATGG---CTC--A------CGT-T-GTT-A-----T
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2236427 19 +   2842873 atatgg---ttc--A------TAT-G-TTT-A-----T
i Spermophilus_dauricus.KZ294190.1                      I 110 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             231247  9 -    276980 ATATGA---CTC--------------------------
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 I 2
s Suricata_suricatta.SurSur_flattened_line_20339            24031 19 +     62062 ATATGG---CTC--A------TAC-T-TTT-A-----T
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189268958 17 + 218635234 AGATGG---CTC--A--------T-T-TTT-A-----T
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                     13898364 19 +  13920577 ATATGG---TTC--A------TAT-T-TTT-A-----T
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               2874 19 -      6213 ATATGG---CTC--A------TGT-T-TTT-A-----T
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               11812 17 +     45698 GTGTTG---CTT--A------TGT-T-T---A-----T
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      803810 17 +   1148477 ATATGG---CTC--A--------T-T-TTT-A-----T
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  54472 17 +     99546 ATATGG---CTC--A--------T-T-TTT-A-----T
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               23152 19 +     42269 ATATGG---CTT--G------TAT-T-TTT-A-----T
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               56466 19 +     65473 ATATGG---CTT--G------TAT-T-TTT-A-----T
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194003734 19 - 194193292 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                   678 16 +      6782 -TATTG---CTC--A------TAT-T-T---A-----T
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  132949 19 -    259118 ATATGA---CTC--A------TAA-T-TTT-A-----T
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        22812 19 +     38948 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   16539 19 -     32910 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       22437 19 +     24652 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      1322 19 -      3559 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           39261 19 -     54611 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       15260 19 +     17312 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    22630 19 -     25040 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          1296 19 +      3528 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  47658 19 +     51589 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       10826 19 +     14732 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       1304 19 -     28054 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44656099 19 -  44834318 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        1109 19 +      3372 ATATGG---ATC--A------TAT-T-TTT-A-----T
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   2300 19 +     90398 ATAAGG---CTC--A------TAT-A-TTT-A-----T
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16078399 19 +  31416278 ATAGTG---Ttc--a------tat-t-tat-a-----a
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2788235 19 -   3938065 aTATGG---CTC--A------TAT-T-TTG-A-----T
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                     796 19 +     13056 ATATGG---CTC--A------TAT-T-TTG-A-----T
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69310424 19 -  96451834 ATA---TGGCTC--A------TAt-t-ttt-a-----t
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 23624 18 -     25548 ACAGCA---GTC--A------TGT-T--TT-A-----T
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6511052  9 +  28682327 ACGTGG---CTC--------------------------
i Ursus_maritimus.KK498671.1                            C 0 I 2
s Varecia_rubra.k141_432109                                  1964 19 -     20643 ATATAG---TTC--A------TAT-T-TTT-A-----T
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             21509 19 -     33872 ATATAG---TTC--A------TAT-T-TTT-A-----T
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1521743 19 -   2331223 ACATGG---CTT--A------TAT-T-TTC-A-----T
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                134206  9 -    281493 ATATAG---CTC--------------------------
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 I 2
s Xerus_inauris.XerIna_scaffold_7898                       123514 19 -    134049 ATATAG---TTA--A------TAT-T-TTT-A-----C
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        210730  9 -    227762 GTGTGG---CTC--------------------------
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 I 2
s Ziphius_cavirostris.ZipCav_flattened_line_127025           3927 19 -      8775 ATA---TGGCTC--A------TAT-T-TTT-A-----T
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Perognathus_longimembris.PerPac_flattened_line_22291      39705  3 -     45160 I
e Dipodomys_stephensi.DipSte_scaffold_44365                 23717  3 +     28912 I
e Dipodomys_ordii.KN672545.1                              3652163  3 +   4240102 I
e Chrysochloris_asiatica.ChrAsi_scaffold_141308              5625 53 -     12508 M
e Megaderma_lyra.MegLyr_scaffold_3562                       61508  0 -    234502 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16291  1 -    119109 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     12283  2 -     20485 I
e Jaculus_jaculus.JH725517.1                              8561873  2 +  11848649 I
e Allactaga_bullata.AllBul_scaffold_70162                    8911  2 -     22067 I
e Nannospalax_galili.KL201303.1                            107449  0 +    362372 C
e Dolichotis_patagonum.DolPat_scaffold_14102                33375  0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             56104 16 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                14631 16 +     26546 I
e Cricetulus_griseus.LT883672.1                          53025429  0 +  72327488 C
e Cavia_tschudii.CavTsc_scaffold_488                       173989  0 +    436027 C
e Cavia_porcellus.DS562889.1                             15795798  0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15783848 16 -  24422027 I
e Arctocebus_calabarensis.k141_1161114                      14526 30 +     17483 I

a score=0.000000
s hg38.chr4_GL000008v2_random                                8368  7 +    209709 GTA---------CAAC
s Acinonyx_jubatus.LLWD01000356.1                         2030462  8 +   3721120 ATAC---A----CAC-
i Acinonyx_jubatus.LLWD01000356.1                       C 0 I 3
s Acomys_cahirinus.AcoCah_scaffold_1625                    108728  7 -    189883 ATA--T---G-GC---
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 1 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10653788  3 +  23371972 ------------CAA-
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 2 I 3
s Ailurus_fulgens.LNAC01000003.1                          7090489  3 -  16596857 ------------CAA-
i Ailurus_fulgens.LNAC01000003.1                        I 2 I 3
s Allenopithecus_nigroviridis.k141_3103707                  59391  7 +     61638 GTA---------CAAC
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        51199  7 +     53391 GTA---------CAAC
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         1923  7 +     72529 GTA---------CAAC
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          1499  7 +      3797 GTA---------CAAC
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             6592  7 -     18050 GTA---------CAAC
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  7709  7 -     11521 GTA---------CAAC
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              7267  7 -     21359 GTA---------CAAC
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1856473                                5650  7 +      7227 GTA---------CAAC
i Alouatta_juara.k141_1856473                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          6564  7 -     10438 GTA---------CAAC
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            3219  7 +      7047 GTA---------CAAC
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             6503  7 +     10410 GTA---------CAAC
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                             306  7 -      4927 ATA---------CAAC
i Alouatta_puruensis.k141_1284840                       I 69 I 257
s Alouatta_seniculus.k141_990213                             3224  7 +      6429 GTA---------CAAC
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3517231  9 +   4113121 aca------taagaa-
i Ammotragus_lervia.NIVO01013474.1                      C 0 I 3
s Anoura_caudifer.AnoCau_scaffold_422                      387416  9 -    631301 ATA----A--AACAA-
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 I 3
s Antilocapra_americana.AntAmePen_scaffold_42841            27864  9 +     33004 ACA------GAAGAA-
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 I 3
s Aotus_azarae.k141_3170768                                 58898  7 +     78111 ATA---------CAAC
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            1829  7 +     22701 ATA---------CAAC
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5745789  7 +   9889416 ata---------caaC
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             2381  7 -    104377 ATA---------CAAC
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               2381  7 +     23246 ATA---------CAAC
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                      411  2 +      5067 -------------AA-
i Aplodontia_rufa.AprRuf_scaffold_156013                N 0 I 3
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 5515  9 -     29036 ATA----A--AACAA-
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 I 3
s Ateles_geoffroyi_b.tarseq_2582                             9535642  7 +  39197703 GTA---------CAAC
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             56930  7 +     85812 ATA---------CAAC
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 7927  7 +     89302 ATA---------CAAC
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             12436  7 -     58268 GTA---------CAAC
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             60424  7 +    119057 ATA---------CAAC
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               2374  7 -     25888 ATA---------CAAC
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 3230 10 -     16375 ATAC---A--A-CAAC
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_767228                               9202 10 -      9688 ATAC---A--A-CAAC
i Avahi_peyrierasi.k141_767228                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26377167  9 +  51448160 aca------gaagaa-
i Balaenoptera_acutorostrata.KI537095.1                 C 0 I 3
s Balaenoptera_bonaerensis.DF502048.1                        2398  9 -     13118 aca------gaagaa-
i Balaenoptera_bonaerensis.DF502048.1                   C 0 I 3
s Beatragus_hunteri.BeaHun_scaffold_21644                   40331  9 -     72089 ACA--T-A--A-GAA-
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 I 3
s Bison_bison.KN264915.1                                  6556478  9 +   6870073 ACA------GAAGAA-
i Bison_bison.KN264915.1                                C 0 I 3
s Bos_indicus.CM003021.1                                138136709  9 - 161108492 ACA------GAAGAA-
i Bos_indicus.CM003021.1                                C 0 I 3
s Bos_mutus.JH883513.1                                     569087  9 -    998990 ACA------GAAGAA-
i Bos_mutus.JH883513.1                                  C 0 I 3
s Bos_taurus.CM000177.6                                 136292442  9 - 158972876 ACA------GAAGAA-
i Bos_taurus.CM000177.6                                 C 0 I 3
s Bubalus_bubalis.KI419065.1                              1228063  9 -   1914593 ACA------GAAGAA-
i Bubalus_bubalis.KI419065.1                            C 0 I 3
s Cacajao_ayresi.k141_724503                               110272  7 -    171031 GTA---------CAAC
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                  9298  7 +    125063 GTA---------CAAC
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                11346  7 -    216513 GTA---------CAAC
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        3885  7 -    134917 GTA---------CAAC
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3216200  9 -   8989139 ACA------GAACAA-
i Camelus_bactrianus.KN276303.1                         C 0 I 3
s Camelus_dromedarius.KN271192.1                           394384  9 -  15254737 ACA------GAACAA-
i Camelus_dromedarius.KN271192.1                        C 0 I 3
s Camelus_ferus.KB016973.1                                2970121  9 +   6889770 ACA------GAACAA-
i Camelus_ferus.KB016973.1                              C 0 I 3
s CanFam4.chr31                                          11515172  3 +  39901454 ------------CAA-
i CanFam4.chr31                                         I 2 I 3
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   10189  3 +     87036 ------------CAA-
i Canis_lupus_VD.CanFam_VD_scaffold_16982               I 2 I 3
s Canis_lupus_dingo.QKWQ01001993.1                       11261831  3 -  35597290 ------------CAA-
i Canis_lupus_dingo.QKWQ01001993.1                      I 2 I 3
s Canis_lupus_familiaris.chr31                           11084360  3 +  39895921 ------------CAA-
i Canis_lupus_familiaris.chr31                          I 2 I 3
s Canis_lupus_orion.HG994411.1                           16451394  3 -  44759192 ------------CAA-
i Canis_lupus_orion.HG994411.1                          I 2 I 3
s Capra_aegagrus.CM003214.1                              21322338  9 + 157394656 aca------taagaa-
i Capra_aegagrus.CM003214.1                             C 0 I 3
s Capra_hircus.CM004562.1                               135703565  9 - 157403528 aca------taagaa-
i Capra_hircus.CM004562.1                               C 0 I 3
s Capromys_pilorides.CapPil_scaffold_647363                  1099  9 +      1887 GTA--T---G-GCAA-
i Capromys_pilorides.CapPil_scaffold_647363             C 0 I 3
s Carlito_syrichta.NW_007248099.1                          305681  7 +    345090 ata---------caac
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               56593  9 +     67245 ATA----A--AACAA-
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 I 3
s Castor_canadensis.CasCan_scaffold_47037                   27113  3 +     33760 GTG-------------
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   155910  8 -    276539 -CAC---A---CAGA-
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 I 3
s Cebus_albifrons.Contig22                               18887111  7 -  29618158 GTA---------CAGC
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 4657  7 -     26817 GTA---------CAGC
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                 8897  7 +     25043 GTA---------CAGC
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         4730  7 +     21754 ATA---------CAAC
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4360378  9 +   7569818 ATAC---A--A-CAA-
i Ceratotherium_simum.JH767818.1                        C 0 I 3
s Ceratotherium_simum_cottoni.CerCot_scaffold_520758          380  9 -       446 ATAC---A--A-CAA-
i Ceratotherium_simum_cottoni.CerCot_scaffold_520758    C 0 I 3
s Cercocebus_atys.KQ010443.1                              6551187  7 +   6739814 GTA---------CAAC
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      52664  7 -     54931 GTA---------CAAC
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         17648  7 -     19697 GTA---------CAAC
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         55179  7 -    107033 GTA---------CAAC
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        1622  7 -      3853 GTA---------CAAC
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          25554  7 +     30494 GTA---------CAAC
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           1577  7 -      4022 GTA---------CAAC
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          1469  7 -      3505 GTA---------CAAC
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           20275  7 +     35983 GTA---------CAAC
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11986797  7 +  12117833 GTA---------CAAC
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46473550  7 +  46592721 GTA---------CAAC
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      31377  7 +     33420 GTA---------CAAC
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        1413  7 -      3443 GTA---------CAAC
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      2404  7 -      4669 GTA---------CAAC
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        2205  7 -      4411 GTA---------CAAC
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         1728  7 -      4205 GTA---------CAAC
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           55566 10 -     68416 ATGC---A--A-CAAA
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            4615 10 +     13308 ATGC---A--A-CAAA
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             1910  7 -     18223 GTA---------CAAC
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             18933  7 +     25473 GTA---------CAAC
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           37972  7 +     57117 GTA---------CAAC
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          42647  7 +     54541 GTA---------CAAC
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15958063  9 +  43084221 taa------tggCAA-
i Chinchilla_lanigera.JH721867.1                        C 0 I 3
s Chiropotes_israelita.k141_1189915                         67493  7 +    196370 GTA---------CAAC
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          11667  7 +     40510 GTA---------CAAC
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15135008  7 -  15256731 GTG---------CAAC
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      30054  7 -     53260 GTG---------CAAC
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101140502  7 + 101219884 GTA---------CAAC
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                13591  9 -     21363 ATAC---A--A-CAG-
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 I 5
s Choloepus_hoffmanni.KN194586.1                           758897  9 +    964067 ATAC---A--A-CAG-
i Choloepus_hoffmanni.KN194586.1                        C 0 I 5
s Colobus_angolensis.KN985967.1                          10879084  7 +  10971483 GTA---------CAAA
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147660243  6 + 156195979 GTA---------CAA-
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            12228  7 +     23629 GTA---------CAAC
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         36299  9 -     40477 AGGC---A--A-CAA-
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 I 3
s Cricetomys_gambianus.CriGam_scaffold_949                 274169  7 -    399297 ATA--T---G-GC---
i Cricetomys_gambianus.CriGam_scaffold_949              I 1 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             15813  9 -     19186 ATAC---A--A-TGA-
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 I 8
s Cryptoprocta_ferox.CryFer_flattened_line_19014            48489  8 -     70449 ATAC---A----CAT-
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 I 3
s Ctenodactylus_gundi.CteGun_scaffold_447                  204901  9 -    956709 ATA--T-A--A-CAA-
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 I 3
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 27168  9 -     67205 TTA--T---G-CCAA-
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 I 3
s Dasypus_novemcinctus.JH568778.1                          178766 11 -   6883506 ata----tttaacag-
i Dasypus_novemcinctus.JH568778.1                       C 0 I 12
s Daubentonia_madagascariensis.ctg11                     16841440 10 +  31942871 ACAC---A--A-CAGC
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80033907  9 -  96802777 aca------gaagaa-
i Delphinapterus_leucas.KZ290064.1                      C 0 I 3
s Desmodus_rotundus.KZ672188.1                           18695903  9 -  18957592 ata------aaacaA-
i Desmodus_rotundus.KZ672188.1                          C 0 I 3
s Dicerorhinus_sumatrensis.PEKH010003161.1                 319035  9 +    993696 ATAC---A--A-CAA-
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 I 3
s Diceros_bicornis.DicBicMic_scaffold_170113                  298  9 +       818 ATAC---A--A-CAA-
i Diceros_bicornis.DicBicMic_scaffold_170113            C 0 I 3
s Echinops_telfairi.JH980316.1                           22991173  9 -  44670279 ATC--T-A--A-ATA-
i Echinops_telfairi.JH980316.1                          I 1 I 3
s Eidolon_helvum.KE772537.1                                  9286  9 +     24177 ata------caacaa-
i Eidolon_helvum.KE772537.1                             C 0 I 3
s Elaphurus_davidianus.JRFZ01086400.1                     1488601  9 +   1727528 AGA------GAAGAA-
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 I 3
s Elephantulus_edwardii.JH947210.1                        7803334  9 +  15467074 GTAC---A--A-AAA-
i Elephantulus_edwardii.JH947210.1                      C 0 I 3
s Ellobius_lutescens.LOEQ01003611.1                        235815  7 -    369425 ATA--T---G-GC---
i Ellobius_lutescens.LOEQ01003611.1                     I 1 C 0
s Ellobius_talpinus.LOJH01090055.1                           2823  7 -      7838 ATA--T---G-GC---
i Ellobius_talpinus.LOJH01090055.1                      I 1 C 0
s Enhydra_lutris.KZ291749.1                              85867280  3 +  99434291 ------------CAG-
i Enhydra_lutris.KZ291749.1                             I 2 I 3
s Equus_asinus.JREZ01000062.1                             5849765  9 -   7175178 ATAC---A--A-GAG-
i Equus_asinus.JREZ01000062.1                           C 0 I 3
s Equus_caballus.CM000402.2                              13348268  9 +  41866177 ATAC---A--A-GAG-
i Equus_caballus.CM000402.2                             C 0 I 3
s Equus_przewalskii.ATBW01073585.1                           9758  9 +     92910 ATAC---A--A-GAG-
i Equus_przewalskii.ATBW01073585.1                      C 0 I 3
s Erythrocebus_patas.Contig8                             48767187  7 -  48907691 GTA---------CAAC
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          312051  9 +    330699 ACA------GAAGAA-
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 I 3
s Eubalaena_japonica.EubJap_flattened_line_7756             58480  9 +     89355 ACA------GAAGAA-
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 I 3
s Eulemur_albifrons.k141_715837                              1637 10 +     13586 ATAC---A--A-CAAC
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               1573 10 -      6809 ATAC---A--A-CAAC
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             8044 10 +     36558 ATAC---A--A-CAAC
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             4361 10 +     60246 ATAC---A--A-CAAC
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 7849 10 +    109717 ATAC---A--A-CAAC
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               12223 10 +     16540 ATAC---A--A-CAAC
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                12500 10 +     27497 ATAC---A--A-CAAC
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           14956 10 +     26808 ATAC---A--A-CAAC
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                29690 10 +     46535 ATAC---A--A-CAAC
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              12413 10 -     29447 ATAC---A--A-CAAC
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129889442  8 - 159252932 ATAC---A----CAC-
i Felis_catus.CM001386.2                                C 0 I 3
s Felis_catus_fca126.CM031420.1                         129276516  8 - 158578461 ATAC---A----CAC-
i Felis_catus_fca126.CM031420.1                         C 0 I 3
s Felis_nigripes.FelNig_flattened_line_8080                 17651  8 +     52776 ATAC---A----CAC-
i Felis_nigripes.FelNig_flattened_line_8080             C 0 I 3
s Fukomys_damarensis.KN123630.1                          13889649  9 -  19261668 CCA--T---GA-CAA-
i Fukomys_damarensis.KN123630.1                         C 0 I 3
s Galago_moholi.ctg555                                     207586 10 -    847004 ATA--T---GA-CAAC
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                            9966 10 -     43889 ATA--T---GA-CAAC
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           7015 10 +     27357 ATA--T---GA-CAAC
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               152899  9 +    324696 ATA--T-A--A-CAA-
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 I 3
s Giraffa_tippelskirchi.LVKQ01S012154.1                    178114  9 -    189561 ACA------GAAGAA-
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 I 3
s Glis_glis.GliGli_scaffold_79770                            9308  9 -     18683 GTA----A-GA-CAA-
i Glis_glis.GliGli_scaffold_79770                       C 0 I 3
s Gorilla_beringei.k141_111300                               1761  7 -     14630 GTA---------CAAC
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119648859  7 - 195582420 GTA---------CAAC
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   73865  9 +    118900 GTA----A-GA-CAA-
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 I 3
s Hapalemur_alaotrensis.k141_1198205                         2184 10 +      3980 ATAC---A--A-TAAC
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             24664 10 +     26611 ATAC---A--A-TAAC
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             2118 10 +     56096 ATAC---A--A-TAAC
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        25391 10 -     42470 ATA--T-A--A-TAAC
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        41988 10 -     54384 ATAC---A--A-TAAC
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              13693  8 +     53719 ATAC---A----CAT-
i Helogale_parvula.HelPar_flattened_line_22962          C 0 I 3
s Hemitragus_hylocrius.HemHyl_scaffold_16669                24600  9 -     91191 ACA--T-A--A-GAA-
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 I 3
s Heterocephalus_glaber.JH602058.1                        2547760  9 +  31725842 CTA--T---GA-CAA-
i Heterocephalus_glaber.JH602058.1                      C 0 I 3
s Heterohyrax_brucei.HetBruBak_scaffold_25354               53169  9 +     73687 ATAC---A--A-AGA-
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 I 3
s Hippopotamus_amphibius.HipAmp_scaffold_1308              144174  9 +    277961 ACA------GAAGAA-
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 I 3
s Hipposideros_armiger.JXIK01001085.1                      275597  9 -    477199 ata------caataa-
i Hipposideros_armiger.JXIK01001085.1                   C 0 I 3
s Hipposideros_galeritus.HipGal_scaffold_104691              4751  9 -      9143 ATAC---A--A-TAA-
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 I 3
s Hoolock_leuconedys.ctg649                                    98433  7 +    115816 GTG---------CAAC
i Hoolock_leuconedys.ctg649                                I 19 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 12761  8 -     67322 ATAC---A----CAA-
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 I 3
s Hylobates_abbotti.k141_493872                              1570  7 +      5897 GTG---------CAAC
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_282275                                783  7 +      1846 GTG---------CAAC
i Hylobates_agilis.k141_282275                          C 0 C 0
s Hylobates_klossii.k141_466549                              8028  7 +     11537 GTG---------CAAC
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_muelleri.k141_1133650                            1005  7 -      2775 GTG---------CAAC
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             29607  7 -     60944 GTG---------CAAC
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     2730  9 +     22540 CTG--T---GA-CAA-
i Hystrix_cristata.HysCri_scaffold_50788                C 0 I 3
s Ictidomys_tridecemlineatus.JH393315.1                   7122522  9 +  13083262 ata------ggatAA-
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 I 3
s Indri_indri.k141_3334527                                   8628 10 +      9207 GTAC---A--A-CAAC
i Indri_indri.k141_3334527                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               5834  9 +     17520 ACA------GAAGAA-
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 I 3
s Kogia_breviceps.KogBre_flattened_line_35920               20666  9 +     37189 ACAGC--A----GAA-
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 I 3
s Lagothrix_lagothricha.k141_12968                          46485  7 -    147782 GTA---------CAAC
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   110779  9 -    115756 ATA----A--AACAA-
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 I 3
s Lemur_catta.scaffold_1                                258403667 10 - 285822530 ATAC---A--A-TAAC
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        20561 10 +     39228 ACGC---A--A-CAAC
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            49937 10 +     63517 ACAC---A---CCAAC
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        75157 10 +    116806 ATAC---A--A-CAAC
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     28198 10 -     33031 ACGC---A--A-CAAC
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3082456  3 -   3498232 ------------CAA-
i Leptonychotes_weddellii.KB714749.1                    I 2 I 3
s Lepus_americanus.LepAme_scaffold_62849                     9669  9 +     22452 CTTC---A-G--CTC-
i Lepus_americanus.LepAme_scaffold_62849                C 0 I 3
s Lipotes_vexillifer.KE558548.1                            133009  9 +   3060487 aca------gaagaa-
i Lipotes_vexillifer.KE558548.1                         C 0 I 3
s Lophocebus_aterrimus.ctg55                             19244273  7 +  19376315 GTA---------CAAC
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            7311 10 +     84689 ATAC---A--A-TAAC
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3775062 10 +   6799190 ATAC---A--A-TAAC
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20587743  9 -  62548349 ATAC---A--A-TAA-
i Loxodonta_africana.GL010040.1                         C 0 I 3
s Lycaon_pictus.CM007556.1                               11083816  3 +  39895028 ------------CAA-
i Lycaon_pictus.CM007556.1                              I 2 I 3
s Macaca_arctoides.k141_2201161                             15959  7 +     74745 GTA---------CAAC
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12702465  7 +  12821369 GTA---------CAAC
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               4558  7 +      6569 GTA---------CAAC
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           42858  7 +     63263 GTA---------CAAC
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_1068107                               11435  7 +     12679 GTA---------CAAC
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                1008  7 +      3017 GTA---------CAAC
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  42620  7 -     79256 GTA---------CAAC
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196031540  7 + 196197964 GTA---------CAAC
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11441644  7 +  11645122 GTA---------CAAC
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   1570  7 -     46448 GTA---------CAAC
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                1397  7 -      3617 GTA---------CAAC
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 11730  7 -     55006 GTA---------CAAC
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43836769  7 +  43892939 GTA---------CAAC
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                3992  7 -      5978 GTA---------CAAC
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               1572  7 -     27140 GTA---------CAAC
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43433433  7 -  43563597 GTA---------CAAC
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4446259  7 -   4543643 GTA---------CAAC
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            143076  9 +    252755 ata------tgacaa-
i Manis_javanica.JSZB01003966.1                         C 0 I 3
s Manis_pentadactyla.KN017078.1                             33140  9 +     58827 ata------tgacaa-
i Manis_pentadactyla.KN017078.1                         C 0 I 3
s Marmota_marmota.CZRN01000005.1                         36870369  9 +  64221397 ata------ggaTAA-
i Marmota_marmota.CZRN01000005.1                        C 0 I 3
s Mellivora_capensis.MelCap_flattened_line_1828            224813  3 -    226874 ------------CAG-
i Mellivora_capensis.MelCap_flattened_line_1828         I 2 I 3
s Meriones_unguiculatus.MerUng_scaffold_52233                8184  7 +     15977 GTA--T---GA-C---
i Meriones_unguiculatus.MerUng_scaffold_52233           I 1 C 0
s Mesocricetus_auratus.KB708139.1                         1043079  7 -  26018355 ata-----tG-GA---
i Mesocricetus_auratus.KB708139.1                       I 6 C 0
s Mesoplodon_bidens.MesBid_scaffold_183284                    705  9 +      2166 ACA------GAAGAA-
i Mesoplodon_bidens.MesBid_scaffold_183284              C 0 I 3
s Microcebus_murinus.CM007691.1                          16506782 10 +  47401472 ata------caacaaG
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  28119  9 -     48017 ATC--T-A--A-ATA-
i Microgale_talazaci.MicTal_scaffold_34660              C 0 I 3
s Micronycteris_hirsuta.MicHir_scaffold_37978               19752  9 -     32043 ATA----A--AACAA-
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 I 3
s Microtus_ochrogaster.CM001673.1                        22815962  7 -  98408828 atg------tgtt---
i Microtus_ochrogaster.CM001673.1                       I 493 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8206471  9 +  10048721 ATA----A-GA-CAA-
i Miniopterus_natalensis.LDJU01000022.1                 C 0 I 3
s Miniopterus_schreibersii.MinSch_scaffold_24116            31152  9 +     45743 ATA----A-GA-CAA-
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 I 3
s Miopithecus_ogouensis.k141_2666161                        32107  7 +     34273 GTA---------CAAC
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         7754  3 -    104932 ------------CAA-
i Mirounga_angustirostris.MirAng_flattened_line_8852    I 2 I 3
s Mirza_zaza.k141_226143                                     2196 10 +      8497 ATAC---A--A-CAAC
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 143432  9 +    154973 ACA------GAAGAA-
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 I 3
s Mormoops_blainvillei.MorMeg_scaffold_2952                158072  9 +    265003 ATA----A--AACAA-
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 I 3
s Moschus_moschiferus.MosMos_scaffold_146101                 1699  9 -      4346 ACA------GAAGAA-
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 I 3
s Mungos_mungo.MunMun_flattened_line_8729                  141383  8 -    168139 ATAC---A----CAT-
i Mungos_mungo.MunMun_flattened_line_8729               C 0 I 3
s Murina_feae.MurFea_scaffold_2254                          16288  9 -    100666 ATA----A--AACAA-
i Murina_feae.MurFea_scaffold_2254                      C 0 I 3
s Mus_caroli.LT608236.1                                  70761828  7 +  92629107 ATA--T---G-GC---
i Mus_caroli.LT608236.1                                 I 7 C 0
s Mus_musculus.chr16                                     75484952  7 +  98207768 ATA--T---GA-C---
i Mus_musculus.chr16                                    I 1 C 0
s Mus_pahari.LT608305.1                                  67549268  7 +  89017189 ATA--T---G-GC---
i Mus_pahari.LT608305.1                                 I 1 C 0
s Mus_spretus.CM004110.1                                 74324371  7 +  97876770 ata------tgac---
i Mus_spretus.CM004110.1                                I 1 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              7819  9 +     98495 GTA----A-GA-AAA-
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 I 3
s Mustela_putorius.JH417978.1                             4419689  3 -  28371801 ------------CAG-
i Mustela_putorius.JH417978.1                           I 2 I 3
s Myocastor_coypus.MyoCoy_scaffold_3653                     86790  9 -    117718 TTA--T---G-GCAA-
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 I 3
s Myotis_brandtii.KE161952.1                               964615  9 +   8389877 ata------aaacaa-
i Myotis_brandtii.KE161952.1                            C 0 I 3
s Myotis_davidii.KB114863.1                               5016292  9 +   6462685 ata------aaacaa-
i Myotis_davidii.KB114863.1                             C 0 I 3
s Myotis_lucifugus.GL429887.1                             3462201  9 -   3747815 ata------aaacaa-
i Myotis_lucifugus.GL429887.1                           C 0 I 3
s Myotis_myotis.MyoMyo_scaffold_6123                         7398  9 +     66751 ATA----A--AACAA-
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 I 3
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             2151  9 -      8794 ATAC---A-G--CAG-
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 I 3
s Nasalis_larvatus.k141_153429                               4472  7 +     48152 GTA---------CAAC
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4481355  3 -  14209539 ------------CAA-
i Neomonachus_schauinslandi.NINY01007774.1              I 2 I 3
s Neophocaena_asiaeorientalis.KZ688543.1                  3948041  9 -   4490290 aca------gaagaa-
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 I 3
s Noctilio_leporinus.NocLep_scaffold_12062                  46402  9 +     94413 ATA----A-GA-CAA-
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 I 3
s Nomascus_annamensis.k141_1223136                          10239  7 -     11253 GTG---------CGAC
i Nomascus_annamensis.k141_1223136                      C 0 C 0
s Nomascus_concolor.k141_190193                               495  7 -      1094 GTA---------CAAC
i Nomascus_concolor.k141_190193                         C 0 I 2
s Nomascus_gabriellae.k141_906566                             871  7 -      2544 GTG---------CGAC
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_1445                              53  7 -      7983 ttg---------caAC
i Nomascus_siki_b.tarseq_1445                       n 7 I 209
s Nomascus_siki_a.k141_844529                                   620  7 +      2124 GTA---------CAAC
i Nomascus_siki_a.k141_844529                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                26812  3 +   3668941 ------------CAA-
i Nyctereutes_procyonoides.CAJHUB010000786.1            I 2 I 3
s Nycticebus_bengalensis.LG16                            65563641 10 -  95554990 ATAC---A--A-TAAC
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                             486 10 +      6470 ATAC---A--A-TAAC
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65666010 10 +  89412551 ATAC---A--A-TAAC
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4992332  9 -  23139505 ATAC---AT---CTA-
i Ochotona_princeps.JH802095.1                          C 0 I 3
s Octodon_degus.JH651621.1                                3675522  9 +  10294119 TTA--T---G-GCAA-
i Octodon_degus.JH651621.1                              C 0 I 3
s Odobenus_rosmarus.KB229369.1                             676013  3 -   3126709 ------------TAA-
i Odobenus_rosmarus.KB229369.1                          I 2 I 3
s Odocoileus_virginianus.KZ101650.1                       1076824  9 +   1425656 ACA------GAAGAA-
i Odocoileus_virginianus.KZ101650.1                     C 0 I 3
s Okapia_johnstoni.LVCL01S0017931.1                         33986  9 +     78940 ACA------GAAGAA-
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 I 3
s Ondatra_zibethicus.OndZib_scaffold_6821                  121293  7 +    145789 ATA--T---G-GC---
i Ondatra_zibethicus.OndZib_scaffold_6821               I 1 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  33245  7 +     62360 ATA--T---G-GC---
i Onychomys_torridus.OnyTor_scaffold_12578              I 1 C 0
s Orcinus_orca.KB316965.1                                 7221725  9 -   7562323 aca------gaagaa-
i Orcinus_orca.KB316965.1                               C 0 I 3
s Orycteropus_afer.OryAfe_flattened_line_13509              39978  9 -     66828 ATAC---A--A-AAA-
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 I 3
s Oryctolagus_cuniculus.CM000803.1                      141872318  9 + 163896628 CTTC---A-G--CTA-
i Oryctolagus_cuniculus.CM000803.1                      C 0 I 3
s Otocyon_megalotis.JAEUCK010005121.1                      304147  3 -    505867 ------------CAA-
i Otocyon_megalotis.JAEUCK010005121.1                   I 2 I 3
s Otolemur_crassicaudatus.k141_321880                       35654 10 +     38679 ATA--T---GA-CAAC
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18005095 10 -  38779656 ata------tgacaaC
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134074402  9 - 275406953 aca------taagaA-
i Ovis_aries.CM001582.2                                 C 0 I 3
s Ovis_canadensis.OviCan_scaffold_6251                      75616  9 +    140051 ACA--T-A--A-GAA-
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 I 3
s Pan_paniscus.CM003386.1                               127571103  7 - 205426864 GTA---------CAAC
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120148250  7 - 196562556 GTA---------CAAC
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  30605  8 +    295523 ATAC---A----CAC-
i Panthera_onca.PanOnc_flattened_line_1615              C 0 I 3
s Panthera_pardus.KV860323.1                              3634209  8 +  18214204 ATAC---A----CAC-
i Panthera_pardus.KV860323.1                            C 0 I 3
s Panthera_tigris.KE721879.1                              5023986  8 -   6340057 ATAC---A----CAC-
i Panthera_tigris.KE721879.1                            C 0 I 3
s Pantholops_hodgsonii.KE114631.1                         1063260  9 -   1292953 aca------taagaa-
i Pantholops_hodgsonii.KE114631.1                       C 0 I 3
s Papio_anubis.CM001492.2                               188152218  7 - 188283584 GTA---------CAAC
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            48430  7 +     76494 GTA---------CAAC
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47509614  7 +  47705337 GTA---------CAAC
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 63597  7 -    104429 GTA---------CAAC
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  13381  7 -     29451 GTA---------CAAC
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                33786  7 +     35859 GTA---------CAAC
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    111937  8 -    135482 ATAC---A----CAC-
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 I 3
s Perodicticus_ibeanus.k141_117958                           1882 10 -     23713 ATAC---AT---CAAC
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            21179 10 -     27972 ATAC---AT---CAAC
i Perodicticus_potto.k141_713187                        C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4946417  7 -   8017169 ata------tggc---
i Peromyscus_maniculatus.KI615518.1                     I 1 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            118342  9 -    122454 ACA------GAAGAA-
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 I 3
s Piliocolobus_badius.k141_1497351                           1473  7 -      3310 GTA---------CAAC
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       21379  7 -     82327 GTA---------CAAC
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           18130  7 +     19957 GTA---------CAAC
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26736139  7 +  26888534 gta---------caac
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            93387 10 +    112873 AGA----A-AAACAA-
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 I 3
s Pithecia_albicans.k141_991845                             39985  7 -     61926 GTA---------CAAC
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        21414  7 +     78826 GTA---------CAAC
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              5365  7 -     15800 GTA---------CAAC
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                         8563  7 -     16101 GTA---------CAAC
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          1872  7 +      9673 GTA---------CAAC
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13470866  7 -  19735023 GTA---------CAAC
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                            9774  7 -     31692 GTA---------CAAC
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           2409  9 +     21690 ACA------GAAGAA-
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 I 3
s Plecturocebus_bernhardi.k141_959214                       19166  7 +     44506 ATA---------CAAC
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        19384  7 +     67491 ATA---------CAAC
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                       9629  7 -     98129 ATA---------CAAC
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     19229  7 +    147771 ATA---------CAAC
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        19480  7 -     23762 ATA---------CAAC
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_2078842                         19428  7 -     19696 ATA---------CAAC
i Plecturocebus_dubius.k141_2078842                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         19302  7 +    152463 ATA---------CAAC
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      6059  7 +      8943 ATA---------CAAC
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                          9019  7 +    134592 ATA---------CAAC
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          19612  7 -     75465 ATA---------CAAC
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              183656  7 -    373494 GTA---------CAAG
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19803560  7 +  19899266 GTA---------CAAG
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               1709  7 -     15069 GTA---------CAAC
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              1843  7 +     14865 GTA---------CAAC
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                73033  9 +     78963 ATAC---A--A-AGA-
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 I 3
s Prolemur_simus.MPIZ01000048.1                           6845040 10 +  12164890 ata------caataaa
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     13475 10 -     30946 ATAC---A--A-CAAC
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                          180 10 +     11805 ATAC---A--A-CAAC
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           39509 10 +     52369 ATAC---A--A-CAAC
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         31898 10 -     44753 ATAC---A--A-CAAC
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            13820 10 +     27322 ATAC---A--A-CGAC
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       13464 10 -     53241 ATAC---A--A-CAAC
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         35736 10 -     48185 ATAC---A--A-CAAC
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           29252  7 +     77221 GTA--T---G-GC---
i Psammomys_obesus.NESX01026517.1                       I 1 C 0
s Pteronotus_parnellii.KE867983.1                             963  9 -     27784 ata------aaacaa-
i Pteronotus_parnellii.KE867983.1                       C 0 I 3
s Pteronura_brasiliensis.PteBra_flattened_line_1343        241548  3 -    344369 ------------CAG-
i Pteronura_brasiliensis.PteBra_flattened_line_1343     I 2 I 3
s Pteropus_alecto.KB031157.1                             13243079  9 -  17261082 ata------taacaa-
i Pteropus_alecto.KB031157.1                            C 0 I 3
s Pteropus_vampyrus.KN525959.1                             601033  9 -   3946241 ata------taacaa-
i Pteropus_vampyrus.KN525959.1                          C 0 I 3
s Puma_concolor.QAVW01000427.1                          131530802  8 - 161321710 ATAC---A----CAC-
i Puma_concolor.QAVW01000427.1                          C 0 I 3
s Pygathrix_cinerea.k141_374971                             25834  7 +     56732 GTA---------CAAC
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6802324  7 +   6970761 GTA---------CAAC
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             1716  7 +     18040 GTA---------CAAC
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                12910  9 +     68503 ACA------GAAGAA-
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 I 3
s Rattus_norvegicus.chr11                                13911194  7 +  90463843 ata------tggc---
i Rattus_norvegicus.chr11                               I 1 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1784680  9 +   2252614 atg------caatAA-
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 I 3
s Rhinopithecus_bieti.k119_102124                           12271  7 -     14454 GTA---------CAAC
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206373597  7 - 206558726 GTA---------CAAC
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44851245  7 -  45163003 GTA---------CAAC
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                16382  9 +    109198 ATAC---A--A-CAA-
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 I 3
s Saiga_tatarica.SaiTat_scaffold_82192                       4688  9 +     12214 ACA--T-A--A-GAA-
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 I 3
s Saimiri_boliviensis.NW_024100938.1                     15669037  7 -  43202129 ata---------caaC
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                         912  7 +     34089 ATA---------CAAC
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                               843  7 -     60842 ATA---------CAAC
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                               912  7 +     67014 ATA---------CAAC
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                               912  7 +     60816 ATA---------CAAC
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                  840  7 -     76454 ATA---------CAAC
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17337420  7 -  30362882 GTA---------CAGC
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         17021  7 -     62485 GTA---------CAGC
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Semnopithecus_entellus.k141_1527475                       24259  7 +     26421 GTA---------CAAC
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       4721  7 +     20762 GTA---------CAAC
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         38454  7 +     40653 GTA---------CAAC
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                            9013  7 -     12194 GTA---------CAAC
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     22432  7 -     27512 GTA---------CAAC
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         31453  7 -     33692 GTA---------CAAC
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   94482  7 -    120886 ATA--T---G-GC---
i Sigmodon_hispidus.SigHis_scaffold_11332               I 1 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            14678  9 +    739146 AAA--T-A--A-CAA-
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 I 6
s Spermophilus_dauricus.KZ294190.1                        2236446  9 +   2842873 ATA-----GGA-TAA-
i Spermophilus_dauricus.KZ294190.1                      C 0 I 3
s Spilogale_gracilis.SpiGra_flattened_line_905             231258  3 -    276980 ------------CAA-
i Spilogale_gracilis.SpiGra_flattened_line_905          I 2 I 3
s Suricata_suricatta.SurSur_flattened_line_20339            24050  8 +     62062 ATAC---A----CAT-
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 I 3
s Sus_scrofa.CM000824.4                                 189268975  9 + 218635234 ACA------GAAAGA-
i Sus_scrofa.CM000824.4                                 C 0 I 3
s Symphalangus_syndactylus.tarseq_24                     13898383  7 +  13920577 GTG---------CAAC
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               2893  8 -      6213 ATA----A--AACA--
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               11829  9 +     45698 ATTC---A-G--CAG-
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 I 3
s Tapirus_indicus.TapInd_scaffold_176                      803827  9 +   1148477 ATAC---A--A-CAA-
i Tapirus_indicus.TapInd_scaffold_176                   C 0 I 3
s Tapirus_terrestris.TapTer_scaffold_14939                  54489  9 +     99546 ATAC---A--A-CAA-
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 I 3
s Tarsius_lariang.k141_609102                               23171  7 +     42269 ATA---------CAAC
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               56485  7 +     65473 ATA---------CAAC
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194003753  7 - 194193292 GTA---------CAAC
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                   694  7 +      6782 ATA--T------AAG-
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 I 3
s Tonatia_saurophila.TonSau_scaffold_3334                  132968  9 -    259118 ATA----A--AACAA-
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 I 3
s Trachypithecus_auratus.k141_738098                        22831  7 +     38948 GTA---------CAAC
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   16558  7 -     32910 GAA---------CAAC
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       22456  7 +     24652 GTA---------CAAC
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      1341  7 -      3559 GTA---------CAAC
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           39280  7 -     54611 GTA---------CAAC
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       15279  7 +     17312 GTA---------CAAC
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    22649  7 -     25040 GTA---------CAAC
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          1315  7 +      3528 GTA---------CAAC
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  47677  7 +     51589 GTA---------CAAC
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       10845  7 +     14732 GTA---------CAAC
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       1323  7 -     28054 GTA---------CAAC
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44656118  7 -  44834318 GTA---------CAAC
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        1128  7 +      3372 GTA---------CAAC
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   2319 15 +     90398 GAGCCTTATGAAGAA-
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 I 3
s Trichechus_manatus.JH594618.1                          16078418  9 +  31416278 ata------caaaaa-
i Trichechus_manatus.JH594618.1                         C 0 I 3
s Tupaia_chinensis.KB320831.1                             2788254  9 -   3938065 ATGCC--A----CAA-
i Tupaia_chinensis.KB320831.1                           C 0 I 3
s Tupaia_tana.TupTan_flattened_line_68454                     815  9 +     13056 ATGCC--A----CAA-
i Tupaia_tana.TupTan_flattened_line_68454               C 0 I 3
s Tursiops_truncatus.MRVK01000923.1                      69310443  9 -  96451834 aca------gaagaa-
i Tursiops_truncatus.MRVK01000923.1                     C 0 I 3
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 23642  9 -     25548 ATC--T-A-G--CAA-
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 I 6
s Ursus_maritimus.KK498671.1                              6511063  3 +  28682327 ------------CAA-
i Ursus_maritimus.KK498671.1                            I 2 I 3
s Varecia_rubra.k141_432109                                  1983 10 -     20643 ATAC---A--A-CAAC
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             21528 10 -     33872 ATAC---A--A-CAAC
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1521762  9 -   2331223 ACA------GAACAA-
i Vicugna_pacos.KN269600.1                              C 0 I 3
s Vulpes_lagopus.VulLag_flattened_line_2045                134217  3 -    281493 ------------CAA-
i Vulpes_lagopus.VulLag_flattened_line_2045             I 2 I 3
s Xerus_inauris.XerIna_scaffold_7898                       123533  9 -    134049 ATA-----GGA-TAA-
i Xerus_inauris.XerIna_scaffold_7898                    C 0 I 3
s Zalophus_californianus.ZalCal_flattened_line_4097        210741  3 -    227762 ------------TAA-
i Zalophus_californianus.ZalCal_flattened_line_4097     I 2 I 3
s Ziphius_cavirostris.ZipCav_flattened_line_127025           3946  9 -      8775 ACA------GAAGAA-
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 I 3
e Perognathus_longimembris.PerPac_flattened_line_22291      39705  3 -     45160 I
e Dipodomys_stephensi.DipSte_scaffold_44365                 23717  3 +     28912 I
e Dipodomys_ordii.KN672545.1                              3652163  3 +   4240102 I
e Chrysochloris_asiatica.ChrAsi_scaffold_141308              5625 53 -     12508 M
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   28446  6 -    114521 I
e Megaderma_lyra.MegLyr_scaffold_3562                       61508  0 -    234502 C
e Condylura_cristata.JH655880.1                          60609850  6 +  78930452 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16291  1 -    119109 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     12283  2 -     20485 I
e Jaculus_jaculus.JH725517.1                              8561873  2 +  11848649 I
e Allactaga_bullata.AllBul_scaffold_70162                    8911  2 -     22067 I
e Nannospalax_galili.KL201303.1                            107449  0 +    362372 C
e Dolichotis_patagonum.DolPat_scaffold_14102                33375  0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             56104 16 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                14631 16 +     26546 I
e Cricetulus_griseus.LT883672.1                          53025429  0 +  72327488 C
e Cavia_tschudii.CavTsc_scaffold_488                       173989  0 +    436027 C
e Cavia_porcellus.DS562889.1                             15795798  0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15783848 16 -  24422027 I
e Arctocebus_calabarensis.k141_1161114                      14526 30 +     17483 I

a score=0.000000
s hg38.chr4_GL000008v2_random                                8375 2 +    209709 AA
s Allenopithecus_nigroviridis.k141_3103707                  59398 2 +     61638 AA
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        51206 2 +     53391 AA
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         1930 2 +     72529 AA
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          1506 2 +      3797 AA
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             6599 2 -     18050 AA
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  7716 2 -     11521 AA
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              7274 2 -     21359 AA
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1856473                                5657 2 +      7227 AA
i Alouatta_juara.k141_1856473                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          6571 2 -     10438 AA
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            3226 2 +      7047 AA
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             6510 2 +     10410 AA
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1374428                             313 2 -     25526 AA
i Alouatta_puruensis.k141_1374428                       I 7 C 0
s Alouatta_seniculus.k141_990213                             3231 2 +      6429 AA
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Aotus_azarae.k141_3170768                                 58905 2 +     78111 AA
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            1836 2 +     22701 AA
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5745796 2 +   9889416 AA
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             2388 2 -    104377 AA
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               2388 2 +     23246 AA
i Aotus_vociferans.k141_718647                          C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9535649 2 +  39197703 AA
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             56937 2 +     85812 AA
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 7934 2 +     89302 AA
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             12443 2 -     58268 AA
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             60431 2 +    119057 AA
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               2381 2 -     25888 AA
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 3240 2 -     16375 AA
i Avahi_laniger.k141_2840928                            C 0 I 3
s Avahi_peyrierasi.k141_767228                               9212 2 -      9688 AA
i Avahi_peyrierasi.k141_767228                          C 0 I 3
s Cacajao_ayresi.k141_724503                               110279 2 -    171031 AA
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                  9305 2 +    125063 AA
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                11353 2 -    216513 AA
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        3892 2 -    134917 AA
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Carlito_syrichta.NW_007248099.1                          305688 2 +    345090 AA
i Carlito_syrichta.NW_007248099.1                       C 0 I 3
s Cebus_albifrons.Contig22                               18887118 2 -  29618158 AA
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 4664 2 -     26817 AA
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                 8904 2 +     25043 AA
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         4737 2 +     21754 AA
i Cephalopachus_bancanus.k141_702587                    C 0 I 3
s Cercocebus_atys.KQ010443.1                              6551194 2 +   6739814 AA
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      52671 2 -     54931 AA
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         17655 2 -     19697 AA
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         55186 2 -    107033 AA
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        1629 2 -      3853 AA
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          25561 2 +     30494 AA
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           1584 2 -      4022 AA
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          1476 2 -      3505 AA
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           20282 2 +     35983 AA
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11986804 2 +  12117833 AA
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46473557 2 +  46592721 AA
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      31384 2 +     33420 AA
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        1420 2 -      3443 AA
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      2411 2 -      4669 AA
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        2212 2 -      4411 AA
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         1735 2 -      4205 AA
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           55576 2 -     68416 AA
i Cheirogaleus_major.k141_1157592                       C 0 I 3
s Cheirogaleus_medius.k141_133808                            4625 2 +     13308 AA
i Cheirogaleus_medius.k141_133808                       C 0 I 3
s Cheracebus_lucifer.k141_619653                             1917 2 -     18223 AA
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             18940 2 +     25473 AA
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           37979 2 +     57117 AA
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          42654 2 +     54541 AA
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chiropotes_israelita.k141_1189915                         67500 2 +    196370 AA
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          11674 2 +     40510 AA
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15135015 2 -  15256731 AA
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      30061 2 -     53260 AA
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101140509 2 + 101219884 AA
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10879091 2 +  10971483 AA
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147660249 2 + 156195979 AA
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            12235 2 +     23629 AA
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16841450 2 +  31942871 AA
i Daubentonia_madagascariensis.ctg11                    C 0 I 3
s Erythrocebus_patas.Contig8                             48767194 2 -  48907691 AA
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eulemur_albifrons.k141_715837                              1647 2 +     13586 AA
i Eulemur_albifrons.k141_715837                         C 0 I 3
s Eulemur_collaris.k141_311830                               1583 2 -      6809 AA
i Eulemur_collaris.k141_311830                          C 0 I 3
s Eulemur_coronatus.k141_3240342                             8054 2 +     36558 AA
i Eulemur_coronatus.k141_3240342                        C 0 I 3
s Eulemur_flavifrons.k141_903901                             4371 2 +     60246 AA
i Eulemur_flavifrons.k141_903901                        C 0 I 3
s Eulemur_fulvus.k141_653297                                 7859 2 +    109717 AA
i Eulemur_fulvus.k141_653297                            C 0 I 3
s Eulemur_macaco.k141_1341545                               12233 2 +     16540 AA
i Eulemur_macaco.k141_1341545                           C 0 I 3
s Eulemur_mongoz.k141_825972                                12510 2 +     27497 AA
i Eulemur_mongoz.k141_825972                            C 0 I 3
s Eulemur_rubriventer.k141_411740                           14966 2 +     26808 AA
i Eulemur_rubriventer.k141_411740                       C 0 I 3
s Eulemur_rufus.k141_1620292                                29700 2 +     46535 AA
i Eulemur_rufus.k141_1620292                            C 0 I 3
s Eulemur_sanfordi.k141_186399                              12423 2 -     29447 AA
i Eulemur_sanfordi.k141_186399                          C 0 I 3
s Galago_moholi.ctg555                                     207596 2 -    847004 AA
i Galago_moholi.ctg555                                  C 0 I 3
s Galago_senegalensis.k141_964197                            9976 2 -     43889 AA
i Galago_senegalensis.k141_964197                       C 0 I 3
s Galagoides_demidoff.k141_1769638                           7025 2 +     27357 AA
i Galagoides_demidoff.k141_1769638                      C 0 I 3
s Gorilla_beringei.k141_111300                               1768 2 -     14630 AA
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119648866 2 - 195582420 AA
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                         2194 2 +      3980 AA
i Hapalemur_alaotrensis.k141_1198205                    C 0 I 3
s Hapalemur_gilberti.k141_97962                             24674 2 +     26611 AA
i Hapalemur_gilberti.k141_97962                         C 0 I 3
s Hapalemur_griseus.k141_1387522                             2128 2 +     56096 AA
i Hapalemur_griseus.k141_1387522                        C 0 I 3
s Hapalemur_meridionalis.k141_186231                        25401 2 -     42470 AA
i Hapalemur_meridionalis.k141_186231                    C 0 I 3
s Hapalemur_occidentalis.k141_797938                        41998 2 -     54384 AA
i Hapalemur_occidentalis.k141_797938                    C 0 I 3
s Hoolock_leuconedys.ctg649                                    98440 2 +    115816 AA
i Hoolock_leuconedys.ctg649                                C 0 C 0
s Hylobates_abbotti.k141_493872                              1577 2 +      5897 AA
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_282275                                790 2 +      1846 AA
i Hylobates_agilis.k141_282275                          C 0 C 0
s Hylobates_klossii.k141_466549                              8035 2 +     11537 AA
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_muelleri.k141_1133650                            1012 2 -      2775 AA
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             29614 2 -     60944 AA
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Indri_indri.k141_3334527                                   8638 2 +      9207 AA
i Indri_indri.k141_3334527                              C 0 I 3
s Lagothrix_lagothricha.k141_12968                          46492 2 -    147782 AA
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lemur_catta.scaffold_1                                258403677 2 - 285822530 AA
i Lemur_catta.scaffold_1                                C 0 I 3
s Lepilemur_ankaranensis.k141_884009                        20571 2 +     39228 AA
i Lepilemur_ankaranensis.k141_884009                    C 0 I 3
s Lepilemur_dorsalis.k141_134267                            49947 2 +     63517 AA
i Lepilemur_dorsalis.k141_134267                        C 0 I 3
s Lepilemur_ruficaudatus.k141_617879                        75167 2 +    116806 AA
i Lepilemur_ruficaudatus.k141_617879                    C 0 I 3
s Lepilemur_septentrionalis.k141_578524                     28208 2 -     33031 AA
i Lepilemur_septentrionalis.k141_578524                 C 0 I 3
s Lophocebus_aterrimus.ctg55                             19244280 2 +  19376315 AA
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            7321 2 +     84689 AA
i Loris_lydekkerianus.k141_550999                       C 0 I 3
s Loris_tardigradus.ctg97                                 3775072 2 +   6799190 AA
i Loris_tardigradus.ctg97                               C 0 I 3
s Macaca_arctoides.k141_2201161                             15966 2 +     74745 AA
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12702472 2 +  12821369 AA
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               4565 2 +      6569 AA
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           42865 2 +     63263 AA
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_1068107                               11442 2 +     12679 AA
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                1015 2 +      3017 AA
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  42627 2 -     79256 AA
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196031547 2 + 196197964 AA
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11441651 2 +  11645122 AA
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   1577 2 -     46448 AA
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                1404 2 -      3617 AA
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 11737 2 -     55006 AA
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43836776 2 +  43892939 AA
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                3999 2 -      5978 AA
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               1579 2 -     27140 AA
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43433440 2 -  43563597 AA
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4446266 2 -   4543643 AA
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Microcebus_murinus.CM007691.1                          16506792 2 +  47401472 AA
i Microcebus_murinus.CM007691.1                         C 0 I 3
s Miopithecus_ogouensis.k141_2666161                        32114 2 +     34273 AA
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirza_zaza.k141_226143                                     2206 2 +      8497 AA
i Mirza_zaza.k141_226143                                C 0 I 3
s Nasalis_larvatus.k141_153429                               4479 2 +     48152 AA
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Nomascus_annamensis.k141_1223136                          10246 2 -     11253 AA
i Nomascus_annamensis.k141_1223136                      C 0 C 0
s Nomascus_concolor.k141_468488                               889 2 -      1482 AA
i Nomascus_concolor.k141_468488                         I 26 I 28
s Nomascus_gabriellae.k141_906566                             878 2 -      2544 AA
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             21352 2 -  18771707 AA
i Nomascus_siki_b.tarseq_80                         I 7 C 0
s Nomascus_siki_a.k141_844529                                   627 2 +      2124 AA
i Nomascus_siki_a.k141_844529                             C 0 C 0
s Nycticebus_bengalensis.LG16                            65563651 2 -  95554990 AA
i Nycticebus_bengalensis.LG16                           C 0 I 3
s Nycticebus_coucang.k141_2051882                             496 2 +      6470 AA
i Nycticebus_coucang.k141_2051882                       C 0 I 3
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65666020 2 +  89412551 AA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 I 3
s Otolemur_crassicaudatus.k141_321880                       35664 2 +     38679 AA
i Otolemur_crassicaudatus.k141_321880                   C 0 I 3
s Otolemur_garnettii.GL873528.1                          18005105 2 -  38779656 AA
i Otolemur_garnettii.GL873528.1                         C 0 I 3
s Pan_paniscus.CM003386.1                               127571110 2 - 205426864 AA
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120148257 2 - 196562556 AA
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Papio_anubis.CM001492.2                               188152225 2 - 188283584 AA
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            48437 2 +     76494 AA
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47509621 2 +  47705337 AA
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 63604 2 -    104429 AA
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  13388 2 -     29451 AA
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                33793 2 +     35859 AA
i Papio_ursinus.k141_3762866                            C 0 C 0
s Perodicticus_ibeanus.k141_117958                           1892 2 -     23713 AA
i Perodicticus_ibeanus.k141_117958                      C 0 I 3
s Perodicticus_potto.k141_713187                            21189 2 -     27972 AA
i Perodicticus_potto.k141_713187                        C 0 I 3
s Piliocolobus_badius.k141_1497351                           1480 2 -      3310 AA
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       21386 2 -     82327 AA
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           18137 2 +     19957 AA
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26736146 2 +  26888534 AA
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pithecia_albicans.k141_991845                             39992 2 -     61926 AA
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        21421 2 +     78826 AA
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              5372 2 -     15800 AA
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                         8570 2 -     16101 AA
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          1879 2 +      9673 AA
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13470873 2 -  19735023 AA
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                            9781 2 -     31692 AA
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       19173 2 +     44506 AA
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        19391 2 +     67491 AA
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                       9636 2 -     98129 AA
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     19236 2 +    147771 AA
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        19487 2 -     23762 AA
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_2078842                         19435 2 -     19696 AA
i Plecturocebus_dubius.k141_2078842                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         19309 2 +    152463 AA
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      6066 2 +      8943 AA
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                          9026 2 +    134592 AA
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          19619 2 -     75465 AA
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              183663 2 -    373494 AA
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19803567 2 +  19899266 AA
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               1716 2 -     15069 AA
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              1850 2 +     14865 AA
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6845050 2 +  12164890 aa
i Prolemur_simus.MPIZ01000048.1                         C 0 I 3
s Propithecus_coquerelli.NW_012147863.1                     13485 2 -     30946 AA
i Propithecus_coquerelli.NW_012147863.1                 C 0 I 3
s Propithecus_coronatus.k141_1353159                          190 2 +     11805 AA
i Propithecus_coronatus.k141_1353159                    C 0 I 3
s Propithecus_diadema.k141_577245                           39519 2 +     52369 AA
i Propithecus_diadema.k141_577245                       C 0 I 3
s Propithecus_edwardsi.k141_1317105                         31908 2 -     44753 AA
i Propithecus_edwardsi.k141_1317105                     C 0 I 3
s Propithecus_perrieri.k141_7554                            13830 2 +     27322 AA
i Propithecus_perrieri.k141_7554                        C 0 I 3
s Propithecus_tattersalli.k141_907138                       13474 2 -     53241 AA
i Propithecus_tattersalli.k141_907138                   C 0 I 3
s Propithecus_verreauxi.k141_158021                         35746 2 -     48185 AA
i Propithecus_verreauxi.k141_158021                     C 0 I 3
s Pygathrix_cinerea.k141_374971                             25841 2 +     56732 AA
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6802331 2 +   6970761 AA
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             1723 2 +     18040 AA
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rhinopithecus_bieti.k119_102124                           12278 2 -     14454 AA
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206373604 2 - 206558726 AA
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44851252 2 -  45163003 AA
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15669044 2 -  43202129 AA
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                         919 2 +     34089 AA
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                               850 2 -     60842 AA
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                               919 2 +     67014 AA
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                               919 2 +     60816 AA
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                  847 2 -     76454 AA
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17337427 2 -  30362882 AA
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         17028 2 -     62485 AA
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Semnopithecus_entellus.k141_1527475                       24266 2 +     26421 AA
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       4728 2 +     20762 AA
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         38461 2 +     40653 AA
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                            9020 2 -     12194 AA
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     22439 2 -     27512 AA
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         31460 2 -     33692 AA
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Symphalangus_syndactylus.tarseq_24                     13898390 2 +  13920577 AA
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tarsius_lariang.k141_609102                               23178 2 +     42269 AA
i Tarsius_lariang.k141_609102                           C 0 I 3
s Tarsius_wallacei.k141_48636                               56492 2 +     65473 AA
i Tarsius_wallacei.k141_48636                           C 0 I 3
s Theropithecus_gelada.CM009951.1                       194003760 2 - 194193292 AA
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Trachypithecus_auratus.k141_738098                        22838 2 +     38948 AA
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   16565 2 -     32910 AA
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       22463 2 +     24652 AA
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      1348 2 -      3559 AA
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           39287 2 -     54611 AA
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       15286 2 +     17312 AA
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    22656 2 -     25040 AA
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          1322 2 +      3528 AA
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  47684 2 +     51589 AA
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       10852 2 +     14732 AA
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       1330 2 -     28054 AA
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44656125 2 -  44834318 AA
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        1135 2 +      3372 AA
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Varecia_rubra.k141_432109                                  1993 2 -     20643 AA
i Varecia_rubra.k141_432109                             C 0 I 3
s Varecia_variegata.k141_775891                             21538 2 -     33872 AA
i Varecia_variegata.k141_775891                         C 0 I 3
e Aplodontia_rufa.AprRuf_scaffold_156013                      413 3 +      5067 I
e Oryctolagus_cuniculus.CM000803.1                      141872327 3 + 163896628 I
e Ochotona_princeps.JH802095.1                            4992341 3 -  23139505 I
e Lepus_americanus.LepAme_scaffold_62849                     9678 3 +     22452 I
e Perognathus_longimembris.PerPac_flattened_line_22291      39705 3 -     45160 I
e Dipodomys_stephensi.DipSte_scaffold_44365                 23717 3 +     28912 I
e Dipodomys_ordii.KN672545.1                              3652163 3 +   4240102 I
e Suricata_suricatta.SurSur_flattened_line_20339            24058 3 +     62062 I
e Chrysochloris_asiatica.ChrAsi_scaffold_141308              5625 53 -     12508 M
e Ziphius_cavirostris.ZipCav_flattened_line_127025           3955 3 -      8775 I
e Zalophus_californianus.ZalCal_flattened_line_4097        210744 3 -    227762 I
e Vulpes_lagopus.VulLag_flattened_line_2045                134220 3 -    281493 I
e Vicugna_pacos.KN269600.1                                1521771 3 -   2331223 I
e Ursus_maritimus.KK498671.1                              6511066 3 +  28682327 I
e Uropsilus_gracilis.UroGra_scaffold_4143_0                 23651 6 -     25548 I
e Tursiops_truncatus.MRVK01000923.1                      69310452 3 -  96451834 I
e Trichechus_manatus.JH594618.1                          16078427 3 +  31416278 I
e Tragulus_javanicus.TraJav_scaffold_14717                   2334 3 +     90398 I
e Tonatia_saurophila.TonSau_scaffold_3334                  132977 3 -    259118 I
e Tolypeutes_matacus.TolMat_scaffold_269431                   701 3 +      6782 I
e Tapirus_terrestris.TapTer_scaffold_14939                  54498 3 +     99546 I
e Tapirus_indicus.TapInd_scaffold_176                      803836 3 +   1148477 I
e Tamandua_tetradactyla.TamTet_scaffold_26877               11838 3 +     45698 I
e Tadarida_brasiliensis.TadBra_scaffold_145589               2901 0 -      6213 C
e Sus_scrofa.CM000824.4                                 189268984 3 + 218635234 I
e Spilogale_gracilis.SpiGra_flattened_line_905             231261 3 -    276980 I
e Solenodon_paradoxus.SolPar_flattened_line_1012            14687 6 +    739146 I
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   28446 6 -    114521 I
e Saiga_tatarica.SaiTat_scaffold_82192                       4697 3 +     12214 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                16391 3 +    109198 I
e Rhinolophus_sinicus.LVEH01000179.1                      1784689 3 +   2252614 I
e Rangifer_tarandus.RanTarSib_scaffold_24239                12919 3 +     68503 I
e Puma_concolor.QAVW01000427.1                          131530810 3 - 161321710 I
e Pteropus_vampyrus.KN525959.1                             601042 3 -   3946241 I
e Pteropus_alecto.KB031157.1                             13243088 3 -  17261082 I
e Pteronura_brasiliensis.PteBra_flattened_line_1343        241551 3 -    344369 I
e Pteronotus_parnellii.KE867983.1                             972 3 -     27784 I
e Procavia_capensis.ProCapCap_scaffold_15315                73042 3 +     78963 I
e Platanista_gangetica.PlaMin_flattened_line_72990           2418 3 +     21690 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            93397 3 +    112873 I
e Phocoena_phocoena.PhoPho_flattened_line_11948            118351 3 -    122454 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    111945 3 -    135482 I
e Pantholops_hodgsonii.KE114631.1                         1063269 3 -   1292953 I
e Panthera_tigris.KE721879.1                              5023994 3 -   6340057 I
e Panthera_pardus.KV860323.1                              3634217 3 +  18214204 I
e Panthera_onca.PanOnc_flattened_line_1615                  30613 3 +    295523 I
e Ovis_canadensis.OviCan_scaffold_6251                      75625 3 +    140051 I
e Ovis_aries.CM001582.2                                 134074411 3 - 275406953 I
e Otocyon_megalotis.JAEUCK010005121.1                      304150 3 -    505867 I
e Orycteropus_afer.OryAfe_flattened_line_13509              39987 3 -     66828 I
e Orcinus_orca.KB316965.1                                 7221734 3 -   7562323 I
e Okapia_johnstoni.LVCL01S0017931.1                         33995 3 +     78940 I
e Odocoileus_virginianus.KZ101650.1                       1076833 3 +   1425656 I
e Odobenus_rosmarus.KB229369.1                             676016 3 -   3126709 I
e Nyctereutes_procyonoides.CAJHUB010000786.1                26815 3 +   3668941 I
e Noctilio_leporinus.NocLep_scaffold_12062                  46411 3 +     94413 I
e Neophocaena_asiaeorientalis.KZ688543.1                  3948050 3 -   4490290 I
e Neomonachus_schauinslandi.NINY01007774.1                4481358 3 -  14209539 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             2160 3 -      8794 I
e Myotis_myotis.MyoMyo_scaffold_6123                         7407 3 +     66751 I
e Myotis_lucifugus.GL429887.1                             3462210 3 -   3747815 I
e Myotis_davidii.KB114863.1                               5016301 3 +   6462685 I
e Myotis_brandtii.KE161952.1                               964624 3 +   8389877 I
e Mustela_putorius.JH417978.1                             4419692 3 -  28371801 I
e Murina_feae.MurFea_scaffold_2254                          16297 3 -    100666 I
e Mungos_mungo.MunMun_flattened_line_8729                  141391 3 -    168139 I
e Moschus_moschiferus.MosMos_scaffold_146101                 1708 3 -      4346 I
e Mormoops_blainvillei.MorMeg_scaffold_2952                158081 3 +    265003 I
e Monodon_monoceros.MonMon_M_scaffold_5598                 143441 3 +    154973 I
e Mirounga_angustirostris.MirAng_flattened_line_8852         7757 3 -    104932 I
e Miniopterus_schreibersii.MinSch_scaffold_24116            31161 3 +     45743 I
e Miniopterus_natalensis.LDJU01000022.1                   8206480 3 +  10048721 I
e Micronycteris_hirsuta.MicHir_scaffold_37978               19761 3 -     32043 I
e Microgale_talazaci.MicTal_scaffold_34660                  28128 3 -     48017 I
e Mesoplodon_bidens.MesBid_scaffold_183284                    714 3 +      2166 I
e Mellivora_capensis.MelCap_flattened_line_1828            224816 3 -    226874 I
e Megaderma_lyra.MegLyr_scaffold_3562                       61508 0 -    234502 C
e Manis_pentadactyla.KN017078.1                             33149 3 +     58827 I
e Manis_javanica.JSZB01003966.1                            143085 3 +    252755 I
e Lycaon_pictus.CM007556.1                               11083819 3 +  39895028 I
e Loxodonta_africana.GL010040.1                          20587752 3 -  62548349 I
e Lipotes_vexillifer.KE558548.1                            133018 3 +   3060487 I
e Leptonychotes_weddellii.KB714749.1                      3082459 3 -   3498232 I
e Lasiurus_borealis.LasBor_scaffold_5102                   110788 3 -    115756 I
e Kogia_breviceps.KogBre_flattened_line_35920               20675 3 +     37189 I
e Inia_geoffrensis.IniGeo_flattened_line_66725               5843 3 +     17520 I
e Hyaena_hyaena.HyaHya_flattened_line_20729                 12769 3 -     67322 I
e Hipposideros_galeritus.HipGal_scaffold_104691              4760 3 -      9143 I
e Hipposideros_armiger.JXIK01001085.1                      275606 3 -    477199 I
e Hippopotamus_amphibius.HipAmp_scaffold_1308              144183 3 +    277961 I
e Heterohyrax_brucei.HetBruBak_scaffold_25354               53178 3 +     73687 I
e Hemitragus_hylocrius.HemHyl_scaffold_16669                24609 3 -     91191 I
e Helogale_parvula.HelPar_flattened_line_22962              13701 3 +     53719 I
e Giraffa_tippelskirchi.LVKQ01S012154.1                    178123 3 -    189561 I
e Felis_nigripes.FelNig_flattened_line_8080                 17659 3 +     52776 I
e Felis_catus_fca126.CM031420.1                         129276524 3 - 158578461 I
e Eubalaena_japonica.EubJap_flattened_line_7756             58489 3 +     89355 I
e Eschrichtius_robustus.EscRob_flattened_line_685          312060 3 +    330699 I
e Equus_przewalskii.ATBW01073585.1                           9767 3 +     92910 I
e Equus_caballus.CM000402.2                              13348277 3 +  41866177 I
e Equus_asinus.JREZ01000062.1                             5849774 3 -   7175178 I
e Enhydra_lutris.KZ291749.1                              85867283 3 +  99434291 I
e Elephantulus_edwardii.JH947210.1                        7803343 3 +  15467074 I
e Elaphurus_davidianus.JRFZ01086400.1                     1488610 3 +   1727528 I
e Eidolon_helvum.KE772537.1                                  9295 3 +     24177 I
e Echinops_telfairi.JH980316.1                           22991182 3 -  44670279 I
e Diceros_bicornis.DicBicMic_scaffold_170113                  307 3 +       818 I
e Dicerorhinus_sumatrensis.PEKH010003161.1                 319044 3 +    993696 I
e Desmodus_rotundus.KZ672188.1                           18695912 3 -  18957592 I
e Delphinapterus_leucas.KZ290064.1                       80033916 3 -  96802777 I
e Dasypus_novemcinctus.JH568778.1                          178777 12 -   6883506 I
e Cryptoprocta_ferox.CryFer_flattened_line_19014            48497 3 -     70449 I
e Crocidura_indochinensis.CroInd_scaffold_38409             15822 8 -     19186 I
e Craseonycteris_thonglongyai.CraTho_scaffold_22679         36308 3 -     40477 I
e Condylura_cristata.JH655880.1                          60609850 6 +  78930452 I
e Choloepus_hoffmanni.KN194586.1                           758906 5 +    964067 I
e Choloepus_didactylus.ChoDid_scaffold_36182                13600 5 -     21363 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_520758          389 3 -       446 I
e Catagonus_wagneri.CatWag_scaffold_1305                   155918 3 -    276539 I
e Carollia_perspicillata.CarPer_scaffold_4436               56602 3 +     67245 I
e Capra_hircus.CM004562.1                               135703574 3 - 157403528 I
e Capra_aegagrus.CM003214.1                              21322347 3 + 157394656 I
e Canis_lupus_orion.HG994411.1                           16451397 3 -  44759192 I
e Canis_lupus_familiaris.chr31                           11084363 3 +  39895921 I
e Canis_lupus_dingo.QKWQ01001993.1                       11261834 3 -  35597290 I
e Canis_lupus_VD.CanFam_VD_scaffold_16982                   10192 3 +     87036 I
e CanFam4.chr31                                          11515175 3 +  39901454 I
e Camelus_ferus.KB016973.1                                2970130 3 +   6889770 I
e Camelus_dromedarius.KN271192.1                           394393 3 -  15254737 I
e Camelus_bactrianus.KN276303.1                           3216209 3 -   8989139 I
e Bubalus_bubalis.KI419065.1                              1228072 3 -   1914593 I
e Bos_taurus.CM000177.6                                 136292451 3 - 158972876 I
e Bos_mutus.JH883513.1                                     569096 3 -    998990 I
e Bos_indicus.CM003021.1                                138136718 3 - 161108492 I
e Bison_bison.KN264915.1                                  6556487 3 +   6870073 I
e Beatragus_hunteri.BeaHun_scaffold_21644                   40340 3 -     72089 I
e Balaenoptera_bonaerensis.DF502048.1                        2407 3 -     13118 I
e Balaenoptera_acutorostrata.KI537095.1                  26377176 3 +  51448160 I
e Artibeus_jamaicensis.ArtJam_scaffold_41619                 5524 3 -     29036 I
e Antilocapra_americana.AntAmePen_scaffold_42841            27873 3 +     33004 I
e Anoura_caudifer.AnoCau_scaffold_422                      387425 3 -    631301 I
e Ammotragus_lervia.NIVO01013474.1                        3517240 3 +   4113121 I
e Ailurus_fulgens.LNAC01000003.1                          7090492 3 -  16596857 I
e Ailuropoda_melanoleuca.LNAT01000321.1                  10653791 3 +  23371972 I
e Acinonyx_jubatus.LLWD01000356.1                         2030470 3 +   3721120 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16291 1 -    119109 I
e Glis_glis.GliGli_scaffold_79770                            9317 3 -     18683 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     12283 2 -     20485 I
e Jaculus_jaculus.JH725517.1                              8561873 2 +  11848649 I
e Allactaga_bullata.AllBul_scaffold_70162                    8911 2 -     22067 I
e Galeopterus_variegatus.GalVar_scaffold_354               152908 3 +    324696 I
e Microtus_ochrogaster.CM001673.1                        22815969 0 -  98408828 C
e Xerus_inauris.XerIna_scaffold_7898                       123542 3 -    134049 I
e Tupaia_tana.TupTan_flattened_line_68454                     824 3 +     13056 I
e Tupaia_chinensis.KB320831.1                             2788263 3 -   3938065 I
e Spermophilus_dauricus.KZ294190.1                        2236455 3 +   2842873 I
e Sigmodon_hispidus.SigHis_scaffold_11332                   94489 0 -    120886 C
e Rattus_norvegicus.chr11                                13911201 0 +  90463843 C
e Psammomys_obesus.NESX01026517.1                           29259 0 +     77221 C
e Peromyscus_maniculatus.KI615518.1                       4946424 0 -   8017169 C
e Onychomys_torridus.OnyTor_scaffold_12578                  33252 0 +     62360 C
e Ondatra_zibethicus.OndZib_scaffold_6821                  121300 0 +    145789 C
e Octodon_degus.JH651621.1                                3675531 3 +  10294119 I
e Nannospalax_galili.KL201303.1                            107449 0 +    362372 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     86799 3 -    117718 I
e Muscardinus_avellanarius.MusAve_scaffold_9643              7828 3 +     98495 I
e Mus_spretus.CM004110.1                                 74324378 0 +  97876770 C
e Mus_pahari.LT608305.1                                  67549275 0 +  89017189 C
e Mus_musculus.chr16                                     75484959 0 +  98207768 C
e Mus_caroli.LT608236.1                                  70761835 0 +  92629107 C
e Mesocricetus_auratus.KB708139.1                         1043086 0 -  26018355 C
e Meriones_unguiculatus.MerUng_scaffold_52233                8191 0 +     15977 C
e Marmota_marmota.CZRN01000005.1                         36870378 3 +  64221397 I
e Ictidomys_tridecemlineatus.JH393315.1                   7122531 3 +  13083262 I
e Hystrix_cristata.HysCri_scaffold_50788                     2739 3 +     22540 I
e Heterocephalus_glaber.JH602058.1                        2547769 3 +  31725842 I
e Graphiurus_murinus.GraMur_scaffold_4493                   73874 3 +    118900 I
e Fukomys_damarensis.KN123630.1                          13889658 3 -  19261668 I
e Ellobius_talpinus.LOJH01090055.1                           2830 0 -      7838 C
e Ellobius_lutescens.LOEQ01003611.1                        235822 0 -    369425 C
e Dolichotis_patagonum.DolPat_scaffold_14102                33375 0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             56104 16 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                14631 16 +     26546 I
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 27177 3 -     67205 I
e Ctenodactylus_gundi.CteGun_scaffold_447                  204910 3 -    956709 I
e Cricetulus_griseus.LT883672.1                          53025429 0 +  72327488 C
e Cricetomys_gambianus.CriGam_scaffold_949                 274176 0 -    399297 C
e Chinchilla_lanigera.JH721867.1                         15958072 3 +  43084221 I
e Cavia_tschudii.CavTsc_scaffold_488                       173989 0 +    436027 C
e Cavia_porcellus.DS562889.1                             15795798 0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15783848 16 -  24422027 I
e Castor_canadensis.CasCan_scaffold_47037                   27116 0 +     33760 C
e Capromys_pilorides.CapPil_scaffold_647363                  1108 3 +      1887 I
e Arctocebus_calabarensis.k141_1161114                      14526 30 +     17483 I
e Acomys_cahirinus.AcoCah_scaffold_1625                    108735 0 -    189883 C

a score=0.000000
s hg38.chr4_GL000008v2_random                                8377 28 +    209709 TCTC--TAAG---GC-TTC--TT-----GGAAAGG----AAC--TA-----G
s Acinonyx_jubatus.LLWD01000356.1                         2030473 28 +   3721120 GTTC--TAAA---GC-TTC--TT-----GGTAAGG----ATT--TA-----A
i Acinonyx_jubatus.LLWD01000356.1                       I 3 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    108735 28 -    189883 -TCC--T------GG-CCC--TG-----AGAAGGA----ATT--TAGTAC-A
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10653794 28 +  23371972 GCTC--TATG---GC-TTC--TT-----GGTAAGA----ATT--TA-----A
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 3 C 0
s Ailurus_fulgens.LNAC01000003.1                          7090495 27 -  16596857 GCTC--TGAG---GG-GTC--TT-----GGTAaga----att--ta------
i Ailurus_fulgens.LNAC01000003.1                        I 3 I 1
s Allenopithecus_nigroviridis.k141_3103707                  59400 28 +     61638 TCTC--TAAG---GC-TTC--TT-----GGAAAGG----AAT--TA-----G
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        51208 28 +     53391 TCTC--TAAG---GC-TTC--TT-----GGAAAGG----AAT--TA-----G
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         1932 28 +     72529 TCTC--TAAG---GC-TTC--TT-----GGAAAGG----AAT--TA-----G
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          1508 28 +      3797 TCTC--TAAG---GC-TTC--TT-----GGAAAGG----AAT--TA-----G
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             6601 28 -     18050 GCTC--TAAG---GC-TTC--TT-----GGAAAGG----ATT--AA-----A
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  7718 28 -     11521 GCTC--TAAG---GC-TTC--TT-----GGAAAGG----ATT--AA-----A
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              7276 28 -     21359 GCTC--TAAG---GC-TTC--TT-----GGAAAGG----ATT--AA-----A
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1856473                                5659 28 +      7227 GCTC--TAAG---GC-TTC--TT-----GGAAAGG----ATT--AA-----A
i Alouatta_juara.k141_1856473                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          6573 28 -     10438 GCTC--TAAG---GC-TTC--TT-----GGAAAGG----ATT--AA-----A
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            3228 28 +      7047 GCTC--TAAG---GC-TTC--TT-----GGAAAGG----ATT--AA-----A
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             6512 28 +     10410 GCTC--TAAG---GC-TTC--TT-----GGAAAGG----ATT--AA-----A
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1374428                             315 28 -     25526 GCTC--TAAG---GC-TTC--TT-----GGAAAGG----ATT--AA-----A
i Alouatta_puruensis.k141_1374428                       C 0 C 0
s Alouatta_seniculus.k141_990213                             3233 28 +      6429 GCTC--TAAG---GC-TTC--TT-----GGAAAGG----ATT--AA-----A
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3517243 28 +   4113121 TCTC--TAAG---AC-TTC--TT-----GGTAAGA----ACT--GA-----A
i Ammotragus_lervia.NIVO01013474.1                      I 3 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      387428 28 -    631301 GCTC--AAAG---GC-TTA--TT-----GGTAAAG----ATT--TA-----A
i Anoura_caudifer.AnoCau_scaffold_422                   I 3 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            27876 28 +     33004 TTTC--TAAG---AC-TTC--TT-----GGTAAGA----ATT--GA-----A
i Antilocapra_americana.AntAmePen_scaffold_42841        I 3 C 0
s Aotus_azarae.k141_3170768                                 58907 28 +     78111 GCTC--TAAG---CC-TTC--TT-----GGAAAGG----ATT--AA-----A
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            1838 28 +     22701 GCTC--TAAG---CC-TTC--TT-----GGAAAGG----ATT--AA-----A
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5745798 28 +   9889416 GCTC--TAAG---CC-TTC--TT-----GGAAAGG----ATT--AA-----A
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             2390 28 -    104377 GCTC--TAAG---CC-TTC--TT-----GGAAAGG----ATT--AA-----A
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               2390 28 +     23246 GCTC--TAAG---CC-TTC--TT-----GGAAAGG----ATT--AA-----A
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                      416 28 +      5067 GGA-CTTACG---GC-TTT--CT-----AGAA-GG----AAA--TA-----G
i Aplodontia_rufa.AprRuf_scaffold_156013                I 3 I 1
s Arctocebus_calabarensis.k141_1161114                      14556 12 +     17483 -----------------------------GACAGG----ATT--TA-----G
i Arctocebus_calabarensis.k141_1161114                  I 30 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 5527 28 -     29036 GCTC--AAAG---GC-TTA--AT-----GGAAAAG----ATT--TA-----A
i Artibeus_jamaicensis.ArtJam_scaffold_41619            I 3 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9535651 28 +  39197703 GCTC--TAAG---GC-TTC--TT-----GGAAAGG----ATT--AA-----A
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             56939 28 +     85812 GCTC--TAAG---TC-TTC--TT-----GGAAAGG----ATT--AA-----A
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 7936 28 +     89302 GCTC--TAAG---TC-TTC--TT-----GGAAAGG----ATT--AA-----A
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             12445 28 -     58268 GCTC--TAAG---GC-TTC--TT-----GGAAAGG----ATT--AA-----A
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             60433 28 +    119057 GCTC--TAAG---TC-TTC--TT-----GGAAAGG----ATT--AA-----A
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               2383 28 -     25888 GCTC--TAAG---TC-TTC--TT-----GGAAAGG----ATT--AA-----A
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 3245 28 -     16375 CCTC--TAAG---GC-TTC--TT-----GGAGAGG----ATT--TA-----G
i Avahi_laniger.k141_2840928                            I 3 C 0
s Avahi_peyrierasi.k141_767228                               9217 28 -      9688 CCTC--TAAG---GC-TTC--TT-----GGAAAGG----ATT--TA-----G
i Avahi_peyrierasi.k141_767228                          I 3 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26377179 28 +  51448160 gcTC--TAAG---AC-TTC--TT-----GGTAAGA----ATT--TA-----A
i Balaenoptera_acutorostrata.KI537095.1                 I 3 C 0
s Balaenoptera_bonaerensis.DF502048.1                        2410 28 -     13118 gcTC--TAAG---AC-TTC--TT-----GGTAAGA----ATT--TA-----A
i Balaenoptera_bonaerensis.DF502048.1                   I 3 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   40343 28 -     72089 TCTC--TAAG---AC-TTC--TT-----GGTAAGA----ATT--GA-----A
i Beatragus_hunteri.BeaHun_scaffold_21644               I 3 C 0
s Bison_bison.KN264915.1                                  6556490 28 +   6870073 TCTC--TAAG---AC-TTC--TT-----GGTAAGA----ATT--GA-----A
i Bison_bison.KN264915.1                                I 3 C 0
s Bos_indicus.CM003021.1                                138136721 28 - 161108492 TCTC--TAAG---AC-TTC--TT-----GGTAAGA----ATT--GA-----A
i Bos_indicus.CM003021.1                                I 3 C 0
s Bos_mutus.JH883513.1                                     569099 28 -    998990 TCTC--TAAG---AC-TTC--TT-----GGTAAGA----ATT--GA-----A
i Bos_mutus.JH883513.1                                  I 3 C 0
s Bos_taurus.CM000177.6                                 136292454 28 - 158972876 TCTC--TAAG---AC-TTC--TT-----GGTAAGA----ATT--GA-----A
i Bos_taurus.CM000177.6                                 I 3 C 0
s Bubalus_bubalis.KI419065.1                              1228075 28 -   1914593 TCTC--TAAG---AC-TTC--TT-----GGTAAGA----ATT--GA-----A
i Bubalus_bubalis.KI419065.1                            I 3 C 0
s Cacajao_ayresi.k141_724503                               110281 28 -    171031 GCTC--TAAG---TC-TTC--CT-----GGAAACG----ATT--AA-----A
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                  9307 28 +    125063 GCTC--TAAG---TC-TTC--CT-----GGAAAGG----ATT--AA-----A
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                11355 28 -    216513 GCTC--TAAG---TC-TTC--CT-----GGAAACG----ATT--AA-----A
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        3894 28 -    134917 GCTC--TAAG---TC-TTC--CT-----GGAAACG----ATT--AA-----A
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3216212 28 -   8989139 TCTC--TAAG---GC-TTC--TT-----GGTAAGA----ATG--TA-----A
i Camelus_bactrianus.KN276303.1                         I 3 C 0
s Camelus_dromedarius.KN271192.1                           394396 28 -  15254737 TCTC--TAAG---GC-TTC--TT-----GGTAAGA----ATG--TA-----A
i Camelus_dromedarius.KN271192.1                        I 3 C 0
s Camelus_ferus.KB016973.1                                2970133 28 +   6889770 TCTC--TAAG---GC-TTC--TT-----GGTAAGA----ATG--TA-----A
i Camelus_ferus.KB016973.1                              I 3 C 0
s CanFam4.chr31                                          11515178 28 +  39901454 GCTA--TAAG---TC-TTC--TT-----GGTAAGA----ATT--TA-----A
i CanFam4.chr31                                         I 3 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   10195 28 +     87036 GCTA--TAAG---TC-TTC--TT-----GGTAAGA----ATT--TA-----A
i Canis_lupus_VD.CanFam_VD_scaffold_16982               I 3 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11261837 28 -  35597290 GCTA--TAAG---TC-TTC--TT-----GGTAAGA----ATT--TA-----A
i Canis_lupus_dingo.QKWQ01001993.1                      I 3 C 0
s Canis_lupus_familiaris.chr31                           11084366 28 +  39895921 GCTA--TAAG---TC-TTC--TT-----GGTAAGA----ATT--TA-----A
i Canis_lupus_familiaris.chr31                          I 3 C 0
s Canis_lupus_orion.HG994411.1                           16451400 28 -  44759192 GCTA--TAAG---TC-TTC--TT-----GGTAAGA----ATT--TA-----A
i Canis_lupus_orion.HG994411.1                          I 3 C 0
s Capra_aegagrus.CM003214.1                              21322350 28 + 157394656 TCTC--TAAG---AC-TTC--TT-----GGTAAGA----ATT--GA-----A
i Capra_aegagrus.CM003214.1                             I 3 C 0
s Capra_hircus.CM004562.1                               135703577 28 - 157403528 TCTC--TAAG---AC-TTC--TT-----GGTAAGA----ATT--GA-----A
i Capra_hircus.CM004562.1                               I 3 C 0
s Capromys_pilorides.CapPil_scaffold_647363                  1111 28 +      1887 CAAC--TAAA---GC-TTT--TT-----GAAAGGA----ATT--TA-----G
i Capromys_pilorides.CapPil_scaffold_647363             I 3 C 0
s Carlito_syrichta.NW_007248099.1                          305693 28 +    345090 TCTC--TAAG---GC-TTT--TT-----GGGAAAG----ATT--TA-----G
i Carlito_syrichta.NW_007248099.1                       I 3 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               56605 28 +     67245 GCTC--AAAG---GC-TTA--TT-----GGTAAAG----ATT--TA-----A
i Carollia_perspicillata.CarPer_scaffold_4436           I 3 C 0
s Castor_canadensis.CasCan_scaffold_47037                   27116 20 +     33760 -------------CC-TTC--TT-----AAAAGAA----ATA--TA-----G
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   155921 28 -    276539 GTTC--TAAG---GC-TTC--TT-----GGTAAAA----ATT--TA-----A
i Catagonus_wagneri.CatWag_scaffold_1305                I 3 C 0
s Cebus_albifrons.Contig22                               18887120 28 -  29618158 GCTC--TAAG---GC-TTC--TT-----GGAAAGG----ATT--AA-----A
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 4666 28 -     26817 GCTC--TAAG---GC-TTC--TT-----GGAAAGG----ATT--AA-----A
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                 8906 28 +     25043 GCTC--TAAG---GC-TTC--TT-----GGAAAGG----ATT--AA-----A
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         4742 28 +     21754 TCTC--TAAG---GC-TTT--TT-----GGGAAAG----ATT--TA-----G
i Cephalopachus_bancanus.k141_702587                    I 3 C 0
s Ceratotherium_simum.JH767818.1                          4360390 28 +   7569818 GCTC--TAAG---GC-TTC--TT-----AGTAAGG----ATT--TA-----A
i Ceratotherium_simum.JH767818.1                        I 3 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_520758          392 28 -       446 GCTC--TAAG---GC-TTC--TT-----AGTAAGG----ATT--TA-----A
i Ceratotherium_simum_cottoni.CerCot_scaffold_520758    I 3 C 0
s Cercocebus_atys.KQ010443.1                              6551196 28 +   6739814 TCTC--TAAG---GC-TTC--TT-----GGAAAGG----AAT--TA-----g
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      52673 28 -     54931 TCTC--TAAG---GC-TTC--TT-----GGAAAGG----AAT--TA-----G
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         17657 28 -     19697 TCTC--TAAG---GC-TTC--TT-----GGAAAGG----AAT--TA-----G
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         55188 28 -    107033 TCTC--TAAG---GC-TTC--TT-----GGAAAGG----AAT--TA-----G
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        1631 28 -      3853 TCTC--TAAG---GC-TTC--TT-----GGAAAGG----AAT--TA-----G
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          25563 28 +     30494 TCTC--TAAG---GC-TTC--TT-----GGAAAGG----AAT--TA-----G
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           1586 28 -      4022 TCTC--TAAG---GC-TTC--TT-----GGAAAGG----AAT--TA-----G
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          1478 28 -      3505 TCTC--TAAG---GC-TTC--TT-----GGAAAGG----AAT--TA-----G
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           20284 28 +     35983 TCTC--TAAG---GC-TTC--TT-----GGAAAGG----AAT--TA-----G
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11986806 28 +  12117833 TCTC--TAAG---GC-TTC--TT-----GGAAAGG----AAT--TA-----G
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46473559 28 +  46592721 TCTC--TAAG---GC-TTC--TT-----GGAAAGG----AAT--TA-----G
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      31386 28 +     33420 TCTC--TAAG---GC-TTC--TT-----GGAAAGG----AAT--TA-----G
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        1422 28 -      3443 TCTC--TAAG---GC-TTC--TT-----GGAAAGG----AAT--TA-----G
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      2413 28 -      4669 TCTC--TAAG---GC-TTC--TT-----GGAAAGG----AAT--TA-----G
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        2214 28 -      4411 TCTC--TAAG---GC-TTC--TT-----GGAAAGG----AAT--TA-----G
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         1737 28 -      4205 TCTC--TAAG---GC-TTC--TT-----GGAAAGG----AAT--TA-----G
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           55581 28 -     68416 CCTC--TAAG---AC-TTC--TT-----GGAAAGG----GCT--TA-----G
i Cheirogaleus_major.k141_1157592                       I 3 C 0
s Cheirogaleus_medius.k141_133808                            4630 28 +     13308 CCTC--TAAG---AC-TTC--TT-----GGAAAGG----GCT--TA-----G
i Cheirogaleus_medius.k141_133808                       I 3 C 0
s Cheracebus_lucifer.k141_619653                             1919 28 -     18223 GCTC--TAAG---CC-TTC--TT-----GAAAAGG----ATT--AA-----A
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             18942 28 +     25473 GCTC--TAAG---CC-TTC--TT-----GAAAAGG----ATT--AA-----A
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           37981 28 +     57117 GCTC--TAAG---CC-TTC--TT-----GAAAAGG----ATT--AA-----A
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          42656 28 +     54541 GCTC--TAAG---CC-TTC--TT-----GAAAAGG----ATT--AA-----A
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15958075 28 +  43084221 CCTC--TAAA---GC-TTC--TT-----GGAAGAG----ATT--TA-----A
i Chinchilla_lanigera.JH721867.1                        I 3 C 0
s Chiropotes_israelita.k141_1189915                         67502 28 +    196370 GCTC--TAAG---TC-TTC--CT-----GGAAAGG----ATT--AA-----A
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          11676 28 +     40510 GCTC--TAAG---TC-TTC--CT-----GGAAAGG----ATT--AA-----A
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15135017 28 -  15256731 TCTC--TAAG---GC-TTC--TT-----GGAAAGG----AAT--TA-----G
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      30063 28 -     53260 TCTC--TAAG---GC-TTC--TT-----GGAAAGG----AAT--TA-----G
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101140511 28 + 101219884 TCTC--TAAG---GC-TTC--TT-----GGAAAGG----AAT--TA-----g
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                13605  4 -     21363 -----------------------------------------A--AA-----A
i Choloepus_didactylus.ChoDid_scaffold_36182            I 5 C 0
s Choloepus_hoffmanni.KN194586.1                           758911  4 +    964067 -----------------------------------------A--AA-----A
i Choloepus_hoffmanni.KN194586.1                        I 5 C 0
s Colobus_angolensis.KN985967.1                          10879093 28 +  10971483 TCTC--TAAG---GC-TTC--TG-----GGAAAGG----AAT--Ta-----g
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147660251 28 + 156195979 TCTC--TAAG---GC-TTC--TG-----GGAAAGG----AAT--TA-----G
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            12237 28 +     23629 TCTC--TAAG---GC-TTC--TG-----GGAAAGG----AAT--TA-----G
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60609856 23 +  78930452 -------AAT---AT-TTC--TT-----GGTAAAG----ATT--AG-----A
i Condylura_cristata.JH655880.1                         I 6 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         36311 28 -     40477 GCTC--TAAG---AC-TTC--TT-----GGTAAAG----ATT--TA-----A
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     I 3 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 274176 28 -    399297 -CAC--T------GG-TTT--TA-----AGGAGGA----ATT--TAGCAC-A
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             15830 33 -     19186 GATG--TAAG---GAAATT--TT-----AGTAAGGGTTTATT--TA-----A
i Crocidura_indochinensis.CroInd_scaffold_38409         I 8 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            48500 28 -     70449 GCTC--TAAG---AC-TTG--TT-----GGTAAGG----ATT--CA-----A
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 3 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  204913 27 -    956709 CCAC--TAAA---GA-T-C--TT-----GGAAGAG----ATT--TA-----A
i Ctenodactylus_gundi.CteGun_scaffold_447               I 3 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 27180 27 -     67205 CCTC--TAAA---AC-TTT--TT-----GAAAGG-----ATT--TA-----A
i Ctenomys_sociabilis.CteSoc_scaffold_19489             I 3 C 0
s Dasypus_novemcinctus.JH568778.1                          178789  7 -   6883506 ----------------------------------------CTTCTA-----A
i Dasypus_novemcinctus.JH568778.1                       I 12 C 0
s Daubentonia_madagascariensis.ctg11                     16841455 28 +  31942871 CCTC--TAAG---GC-TTC--TT-----GGAAAGC----ATT--TA-----G
i Daubentonia_madagascariensis.ctg11                    I 3 C 0
s Delphinapterus_leucas.KZ290064.1                       80033919 28 -  96802777 gcTC--TAAG---AC-TTC--TT-----GGTAAGA----ATT--TA-----A
i Delphinapterus_leucas.KZ290064.1                      I 3 C 0
s Desmodus_rotundus.KZ672188.1                           18695915 28 -  18957592 GCTC--AAAG---GC-TTA--TT-----GGTAAAG----TTG--TA-----A
i Desmodus_rotundus.KZ672188.1                          I 3 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 319047 28 +    993696 GCTC--TAAG---GC-TTC--TT-----AGTAAGG----ATT--TA-----A
i Dicerorhinus_sumatrensis.PEKH010003161.1              I 3 C 0
s Diceros_bicornis.DicBicMic_scaffold_170113                  310 28 +       818 GCTC--TAAG---GC-TTC--TT-----AGTAAGG----ATT--TA-----A
i Diceros_bicornis.DicBicMic_scaffold_170113            I 3 C 0
s Echinops_telfairi.JH980316.1                           22991185 28 -  44670279 CCTT--CACA---GC-CTC--CT-----GAAAAGA----CTG--TA-----A
i Echinops_telfairi.JH980316.1                          I 3 C 0
s Eidolon_helvum.KE772537.1                                  9298 28 +     24177 ATTC--TAAG---GC-TTC--TT-----CATAAGA----ATT--TA-----A
i Eidolon_helvum.KE772537.1                             I 3 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1488613 28 +   1727528 TCTC--TAAG---AC-TTC--TT-----GGTAAGA----ATT--GA-----A
i Elaphurus_davidianus.JRFZ01086400.1                   I 3 C 0
s Elephantulus_edwardii.JH947210.1                        7803346 28 +  15467074 CCTC--CAAA---GC-ATC--TT-----AACATTA----ATT--TA-----G
i Elephantulus_edwardii.JH947210.1                      I 3 C 0
s Ellobius_lutescens.LOEQ01003611.1                        235822 28 -    369425 -TGA--T------AG-TTC--TG-----AGAAGAA----ATT--TAGCAC-a
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           2830 28 -      7838 -TGG--T------GG-TTC--TG-----AGAAGAA----ATT--TAGCAC-A
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85867286 28 +  99434291 TCTC--TGAG---GG-TTC--TT-----GGTAAGA----ATT--TA-----A
i Enhydra_lutris.KZ291749.1                             I 3 I 930
s Equus_asinus.JREZ01000062.1                             5849777 28 -   7175178 GCTC--TAAT---GC-TTA--TT-----AGTAAGG----ATT--TA-----G
i Equus_asinus.JREZ01000062.1                           I 3 C 0
s Equus_caballus.CM000402.2                              13348280 28 +  41866177 GCTC--TAAT---GC-TTA--TT-----AGTAAGG----ATT--TA-----G
i Equus_caballus.CM000402.2                             I 3 C 0
s Equus_przewalskii.ATBW01073585.1                           9770 28 +     92910 GCTC--TAAT---GC-TTA--TT-----AGTAAGG----ATT--TA-----G
i Equus_przewalskii.ATBW01073585.1                      I 3 C 0
s Erythrocebus_patas.Contig8                             48767196 28 -  48907691 TCTC--TAAG---GC-TTC--TT-----GGAAAGG----AAT--TA-----G
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          312063 28 +    330699 GCTC--TAAG---AC-TTC--TT-----GGTAAGA----ATT--TA-----A
i Eschrichtius_robustus.EscRob_flattened_line_685       I 3 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             58492 28 +     89355 GCTC--TAAG---AC-TTC--TT-----GGTAAGA----ATT--TA-----A
i Eubalaena_japonica.EubJap_flattened_line_7756         I 3 C 0
s Eulemur_albifrons.k141_715837                              1652 28 +     13586 CCTC--TAAG---GC-TTC--TT-----AGAAAGG----ATT--TA-----G
i Eulemur_albifrons.k141_715837                         I 3 C 0
s Eulemur_collaris.k141_311830                               1588 28 -      6809 CCTC--TAAG---GC-TTC--TT-----AGAAAGG----ATT--TA-----G
i Eulemur_collaris.k141_311830                          I 3 C 0
s Eulemur_coronatus.k141_3240342                             8059 28 +     36558 CCTC--TAAG---GC-TTC--TT-----AGAAAGG----ATT--TA-----G
i Eulemur_coronatus.k141_3240342                        I 3 C 0
s Eulemur_flavifrons.k141_903901                             4376 28 +     60246 CCTC--TAAG---GC-TTC--TT-----AGAAATG----ATT--TA-----G
i Eulemur_flavifrons.k141_903901                        I 3 C 0
s Eulemur_fulvus.k141_653297                                 7864 28 +    109717 CCTC--TAAG---GC-TTC--TT-----AGAAAGG----ATT--TA-----G
i Eulemur_fulvus.k141_653297                            I 3 C 0
s Eulemur_macaco.k141_1341545                               12238 28 +     16540 CCTC--TAAG---GC-TTC--TT-----AGAAATG----ATT--TA-----G
i Eulemur_macaco.k141_1341545                           I 3 C 0
s Eulemur_mongoz.k141_825972                                12515 28 +     27497 CCTC--TAAG---GC-TTC--TT-----AGAAAGG----ATT--TA-----G
i Eulemur_mongoz.k141_825972                            I 3 C 0
s Eulemur_rubriventer.k141_411740                           14971 28 +     26808 CCTC--TAAG---GC-TTC--TT-----AGAAAGG----ATT--TA-----G
i Eulemur_rubriventer.k141_411740                       I 3 C 0
s Eulemur_rufus.k141_1620292                                29705 28 +     46535 CCTC--TAAG---GC-TTC--TT-----AGAAAGG----ATT--TA-----G
i Eulemur_rufus.k141_1620292                            I 3 C 0
s Eulemur_sanfordi.k141_186399                              12428 28 -     29447 CCTC--TAAG---GC-TTC--TT-----AGAAAGG----ATT--TA-----G
i Eulemur_sanfordi.k141_186399                          I 3 C 0
s Felis_catus.CM001386.2                                129889453 28 - 159252932 GTTC--TAAA---GC-TTC--TT-----GGTAAGG----ATT--TA-----A
i Felis_catus.CM001386.2                                I 3 C 0
s Felis_catus_fca126.CM031420.1                         129276527 28 - 158578461 GTTC--TAAA---GC-TTC--TT-----GGTAAGG----ATT--TA-----A
i Felis_catus_fca126.CM031420.1                         I 3 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 17662 28 +     52776 GTTC--TAAA---GC-TTC--TT-----GGTAAGG----ATT--TA-----A
i Felis_nigripes.FelNig_flattened_line_8080             I 3 C 0
s Fukomys_damarensis.KN123630.1                          13889661 28 -  19261668 CTTC--TGAA---GC-TTT--TT-----ggaagtt----att--ta-----a
i Fukomys_damarensis.KN123630.1                         I 3 C 0
s Galago_moholi.ctg555                                     207601 28 -    847004 CCTC--TAAG---GC-TAC--TT-----GGAAAGG----ATT--TA-----G
i Galago_moholi.ctg555                                  I 3 C 0
s Galago_senegalensis.k141_964197                            9981 28 -     43889 CCTC--TAAG---GC-TAC--TT-----GGAAAGG----ATT--TA-----G
i Galago_senegalensis.k141_964197                       I 3 C 0
s Galagoides_demidoff.k141_1769638                           7030 28 +     27357 CCTC--TAAG---GC-TAC--TT-----GGAAAGG----ATT--TA-----C
i Galagoides_demidoff.k141_1769638                      I 3 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               152911 28 +    324696 TCTC--TAAG---GC-TTG--TT-----AGAAATG----ATT--CA-----A
i Galeopterus_variegatus.GalVar_scaffold_354            I 3 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    178126 28 -    189561 TCTC--TAAG---AC-TTC--TT-----GGTAAGA----ATT--GA-----A
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 3 C 0
s Glis_glis.GliGli_scaffold_79770                            9320 27 -     18683 CCAC--TAAG---GC-TTC--TT-----GGAAG-G----ATC--TA-----A
i Glis_glis.GliGli_scaffold_79770                       I 3 I 1
s Gorilla_beringei.k141_111300                               1770 28 -     14630 TCTC--TAAG---AC-TTC--TT-----GGAAAGG----AAC--TA-----G
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119648868 28 - 195582420 TCTC--TAAG---GC-TTC--TT-----GGAAAGG----AAC--TA-----g
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   73877 25 +    118900 CCAC--CAAG---GC-TTC--TT-----GGAAGGT----ATT----------
i Graphiurus_murinus.GraMur_scaffold_4493               I 3 C 0
s Hapalemur_alaotrensis.k141_1198205                         2199 28 +      3980 CCTC--TAAG---GC-TCC--CT-----GGAAAGG----ATT--TA-----G
i Hapalemur_alaotrensis.k141_1198205                    I 3 C 0
s Hapalemur_gilberti.k141_97962                             24679 28 +     26611 CCTC--TAAG---GC-TCC--CT-----GGAAAGG----ATT--TA-----G
i Hapalemur_gilberti.k141_97962                         I 3 C 0
s Hapalemur_griseus.k141_1387522                             2133 28 +     56096 CCTC--TAAG---GC-TCC--CT-----GGAAAGG----ATT--TA-----G
i Hapalemur_griseus.k141_1387522                        I 3 C 0
s Hapalemur_meridionalis.k141_186231                        25406 28 -     42470 CCTC--TAAG---GC-TCC--CT-----GGAAAGG----ATT--TA-----G
i Hapalemur_meridionalis.k141_186231                    I 3 C 0
s Hapalemur_occidentalis.k141_797938                        42003 28 -     54384 CCTC--TAAG---GC-TCC--CT-----GGAAAGG----ATT--TA-----G
i Hapalemur_occidentalis.k141_797938                    I 3 C 0
s Helogale_parvula.HelPar_flattened_line_22962              13704 27 +     53719 GCTC--TAAG----C-TTG--TT-----CATAAGG----ATT--CA-----G
i Helogale_parvula.HelPar_flattened_line_22962          I 3 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                24612 28 -     91191 TCTC--TAAG---AC-TTC--TT-----GGTAAGA----ATT--GA-----A
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 3 C 0
s Heterocephalus_glaber.JH602058.1                        2547772 28 +  31725842 CTTC--TAAA---GC-TTT--TT-----Ggaagat----atg--ta-----a
i Heterocephalus_glaber.JH602058.1                      I 3 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               53181 28 +     73687 CTTC--CCAT---GT-GTC--TT-----GGTAAGC----ATT--TA-----A
i Heterohyrax_brucei.HetBruBak_scaffold_25354           I 3 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              144186 28 +    277961 GCTC--TAAG---AC-TTC--TT-----GGTAAGA----ATT--TA-----A
i Hippopotamus_amphibius.HipAmp_scaffold_1308           I 3 C 0
s Hipposideros_armiger.JXIK01001085.1                      275609 28 -    477199 GCTC--TAAG---GC-TTC--CT-----GGTAAGG----ATT--TA-----A
i Hipposideros_armiger.JXIK01001085.1                   I 3 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              4763 28 -      9143 GCTC--TAAG---GC-TTC--TT-----GGTAAGG----ATT--TA-----A
i Hipposideros_galeritus.HipGal_scaffold_104691         I 3 C 0
s Hoolock_leuconedys.ctg649                                    98442 28 +    115816 TCTC--TAAG---GC-TTC--TT-----GGAAAGG----AAC--TA-----G
i Hoolock_leuconedys.ctg649                                C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 12772 28 -     67322 GCTC--TAAG---GC-TTT--CT-----TGTAAGG----ATT--CA-----A
i Hyaena_hyaena.HyaHya_flattened_line_20729             I 3 C 0
s Hylobates_abbotti.k141_493872                              1579 28 +      5897 TCTC--TAAG---GC-TTC--TT-----GGAAAGG----AAC--TA-----G
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_282275                                792 28 +      1846 TCTC--TAAG---GC-TTC--TT-----GGAAAGG----AAC--TA-----G
i Hylobates_agilis.k141_282275                          C 0 C 0
s Hylobates_klossii.k141_466549                              8037 28 +     11537 TCTC--TAAG---GC-TTC--TT-----GGAAAGG----AAC--TA-----G
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_muelleri.k141_1133650                            1014 28 -      2775 TCTC--TAAG---GC-TTC--TT-----GGAAAGG----AAC--TA-----G
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             29616 28 -     60944 TCTC--TAAG---GC-TTC--TT-----GGAAAGG----AAC--TA-----G
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     2742 28 +     22540 TCTC--TCAA---GG-TTC--TT-----GGAAGAG----ATT--TA-----A
i Hystrix_cristata.HysCri_scaffold_50788                I 3 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7122534 28 +  13083262 CCTC--TGAG---GC-TCC--TT-----GAGAGGT----GTT--TA-----A
i Ictidomys_tridecemlineatus.JH393315.1                 I 3 I 1
s Indri_indri.k141_3334527                                   8643 28 +      9207 CCTC--TAAG---GC-TTC--TT-----GGAAAGG----ATT--TA-----G
i Indri_indri.k141_3334527                              I 3 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               5846 28 +     17520 GCTC--TAAG---AC-TTC--TT-----GGTAAGA----ATT--TA-----A
i Inia_geoffrensis.IniGeo_flattened_line_66725          I 3 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               20678 28 +     37189 GCTC--TAAG---AC-TTC--TT-----GGTAAGA----ATT--TA-----A
i Kogia_breviceps.KogBre_flattened_line_35920           I 3 C 0
s Lagothrix_lagothricha.k141_12968                          46494 28 -    147782 GCTC--TAAG---TC-TTC--TT-----GGAAAGG----ATT--AA-----A
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   110791 28 -    115756 GTTC--TAAA---AA-TTC--CT-----GGTAAAA----ATT--TA-----A
i Lasiurus_borealis.LasBor_scaffold_5102                I 3 C 0
s Lemur_catta.scaffold_1                                258403682 28 - 285822530 CCTC--TAAG---GC-TCC--TT-----GGAAAGG----ATT--TA-----G
i Lemur_catta.scaffold_1                                I 3 C 0
s Lepilemur_ankaranensis.k141_884009                        20576 28 +     39228 CCTC--TAAG---AC-TTC--TT-----GGAAAGG----GTT--TA-----G
i Lepilemur_ankaranensis.k141_884009                    I 3 C 0
s Lepilemur_dorsalis.k141_134267                            49952 28 +     63517 CCTC--TAAG---AC-TTC--TT-----GGAAAGG----GTT--TA-----G
i Lepilemur_dorsalis.k141_134267                        I 3 C 0
s Lepilemur_ruficaudatus.k141_617879                        75172 28 +    116806 CCTC--TAAG---AC-TTC--TT-----GGAAAGG----CTT--TA-----G
i Lepilemur_ruficaudatus.k141_617879                    I 3 C 0
s Lepilemur_septentrionalis.k141_578524                     28213 28 -     33031 CCTC--TAAG---AC-TTC--TT-----GGAAAGG----GTT--TA-----G
i Lepilemur_septentrionalis.k141_578524                 I 3 C 0
s Leptonychotes_weddellii.KB714749.1                      3082462 28 -   3498232 GCTC--TGAG---GC-TTC--TG-----GGTAAGA----ATT--TA-----A
i Leptonychotes_weddellii.KB714749.1                    I 3 C 0
s Lepus_americanus.LepAme_scaffold_62849                     9681 28 +     22452 CTTC--TAAT---TC-TTC--TT-----AGAAGGG----ACT--TC-----A
i Lepus_americanus.LepAme_scaffold_62849                I 3 C 0
s Lipotes_vexillifer.KE558548.1                            133021 28 +   3060487 gcTC--TAAG---AC-TTC--TT-----GGTAAGA----ATT--TG-----A
i Lipotes_vexillifer.KE558548.1                         I 3 C 0
s Lophocebus_aterrimus.ctg55                             19244282 28 +  19376315 TCTC--TAAG---GC-TTC--TT-----GGAAAGG----AAT--TA-----G
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            7326 28 +     84689 CCTC--GAAG---AC-TAC--TT-----GGAAAGG----ATT--TA-----G
i Loris_lydekkerianus.k141_550999                       I 3 C 0
s Loris_tardigradus.ctg97                                 3775077 28 +   6799190 CCTC--GAAG---AC-TAC--TT-----GGAAAGG----ATT--TA-----G
i Loris_tardigradus.ctg97                               I 3 C 0
s Loxodonta_africana.GL010040.1                          20587755 28 -  62548349 CCTC--TAAC---AA-GTC--TT-----GGTAAAC----ATT--TA-----A
i Loxodonta_africana.GL010040.1                         I 3 C 0
s Lycaon_pictus.CM007556.1                               11083822 28 +  39895028 GCTA--TAGG---TC-TTC--TT-----GGTAAGA----ATT--TA-----A
i Lycaon_pictus.CM007556.1                              I 3 C 0
s Macaca_arctoides.k141_2201161                             15968 28 +     74745 TCTC--TAAG---GC-TTC--TT-----GGAAAGG----AAT--TA-----G
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12702474 28 +  12821369 TCTC--TAAG---GC-TTC--TT-----GGAAAGG----AAT--TA-----G
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               4567 28 +      6569 TCTC--TAAG---GC-TTC--TT-----GGAAAGG----AAT--TA-----G
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           42867 28 +     63263 TCTC--TAAG---GC-TTC--TT-----GGAAAGG----AAT--TA-----G
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_1068107                               11444 28 +     12679 TCTC--TAAG---GC-TTC--TT-----GGAAAGG----AAT--TA-----G
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                1017 28 +      3017 TCTC--TAAG---GC-TTC--TT-----GGAAAGG----AAT--TA-----G
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  42629 28 -     79256 TCTC--TAAG---GC-TTC--TT-----GGAAAGG----AAT--TA-----G
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196031549 28 + 196197964 TCTC--TAAG---GC-TTC--TT-----GGAAAGG----AAT--Ta-----g
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11441653 28 +  11645122 TCTC--TAAG---GC-TTC--TT-----GGAAAGG----AAT--Ta-----g
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   1579 28 -     46448 TCTC--TAAG---GC-TTC--TT-----GGAAAGG----AAT--TA-----G
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                1406 28 -      3617 TCTC--TAAG---GC-TTC--TT-----GGAAAGG----AAT--TA-----G
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 11739 28 -     55006 TCTC--TAAG---GC-TTC--TT-----GGAAAGG----AAT--TA-----G
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43836778 28 +  43892939 TCTC--TAAG---GC-TTC--TT-----GGAAAGG----AAT--TA-----G
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                4001 28 -      5978 TCTC--TAAG---GC-TTC--TT-----GGAAAGG----AAT--TA-----G
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               1581 28 -     27140 TCTC--TAAG---GC-TTC--TT-----GGAAAGG----AAT--TA-----G
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43433442 28 -  43563597 TCTC--TAAG---GC-TTC--TT-----GGAAAGG----AAT--TA-----G
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4446268 28 -   4543643 TCTC--TAAG---GC-TTC--TT-----GGAAAGG----AAT--TA-----G
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            143088 28 +    252755 ACTG--TAAT---GT-TTC--TT-----GATAAGG----ATT--TA-----A
i Manis_javanica.JSZB01003966.1                         I 3 C 0
s Manis_pentadactyla.KN017078.1                             33152 28 +     58827 ACTG--TAAT---GT-TTC--TT-----GATAAGG----ATT--TA-----A
i Manis_pentadactyla.KN017078.1                         I 3 C 0
s Marmota_marmota.CZRN01000005.1                         36870381 28 +  64221397 CCTC--CGAG---GC-TCC--TT-----GAGAGGT----GTT--TA-----A
i Marmota_marmota.CZRN01000005.1                        I 3 I 1
s Mellivora_capensis.MelCap_flattened_line_1828            224819 28 -    226874 TCTC--TGAG---GG-TTC--TT-----GGTAAGA----ATT--TA-----A
i Mellivora_capensis.MelCap_flattened_line_1828         I 3 I 895
s Meriones_unguiculatus.MerUng_scaffold_52233                8191 28 +     15977 -CAC--T------GG-TTC--TG-----AGAAGGA----ATT--TAGCAC-A
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1043086 28 -  26018355 -TGC--T------AG-TTC--TG-----AGAAGAA----ATT--TAGCAC-A
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_183284                    717 28 +      2166 GCTC--TAAG---AC-TTC--TT-----GGTAAGA----ATT--TA-----A
i Mesoplodon_bidens.MesBid_scaffold_183284              I 3 C 0
s Microcebus_murinus.CM007691.1                          16506797 28 +  47401472 CCTC--TAAG---AC-TTC--TT-----GGAAAGG----ATT--Ta-----g
i Microcebus_murinus.CM007691.1                         I 3 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  28131 28 -     48017 CCTT--CACA---GT-CTC--TT-----GAAAAGG----CTG--TA-----A
i Microgale_talazaci.MicTal_scaffold_34660              I 3 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               19764 28 -     32043 GCTC--AAAG---GT-TTA--TT-----GGTAAAG----ATT--TA-----A
i Micronycteris_hirsuta.MicHir_scaffold_37978           I 3 C 0
s Microtus_ochrogaster.CM001673.1                        22815969 28 -  98408828 -tga--T------GG-TTC--TG-----AGAAGAA----ATT--TAGCAc-a
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8206483 28 +  10048721 GCTC--TCTG---GC-TTC--TT-----GGTAAGG----ATT--TA-----A
i Miniopterus_natalensis.LDJU01000022.1                 I 3 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            31164 28 +     45743 GCTC--TCTG---GC-TTC--TT-----GGTAAGG----ATT--TA-----T
i Miniopterus_schreibersii.MinSch_scaffold_24116        I 3 C 0
s Miopithecus_ogouensis.k141_2666161                        32116 28 +     34273 TCTC--TAAG---GC-TTC--TT-----GGAAAGG----AAT--TA-----G
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         7760 28 -    104932 GCTC--TGAG---GC-TTC--TG-----GGTAAGA----ATT--TA-----A
i Mirounga_angustirostris.MirAng_flattened_line_8852    I 3 C 0
s Mirza_zaza.k141_226143                                     2211 28 +      8497 TCTC--TAAG---AC-TTC--TT-----GGAAAGG----ATT--TA-----G
i Mirza_zaza.k141_226143                                I 3 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 143444 28 +    154973 GCTC--TAAG---AC-TTC--TT-----GGTAAGA----ATT--TA-----A
i Monodon_monoceros.MonMon_M_scaffold_5598              I 3 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                158084 28 +    265003 GCTC--AAAG---GC-TCA--TT-----GGTAAGG----ATT--TA-----A
i Mormoops_blainvillei.MorMeg_scaffold_2952             I 3 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 1711 28 -      4346 TCTC--TAAG---AC-TTC--TT-----GGTAAGA----ATT--GA-----A
i Moschus_moschiferus.MosMos_scaffold_146101            I 3 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  141394 27 -    168139 GCTC--TAAG----C-TTG--TT-----CGTAAGG----ATT--CA-----A
i Mungos_mungo.MunMun_flattened_line_8729               I 3 C 0
s Murina_feae.MurFea_scaffold_2254                          16300 28 -    100666 GCTC--TAAA---GA-TTC--CT-----GGTAAAA----TTT--TG-----A
i Murina_feae.MurFea_scaffold_2254                      I 3 C 0
s Mus_caroli.LT608236.1                                  70761835 28 +  92629107 -TGC--T------GC-TTC--TG-----TAAAGGA----ATt--tagctc-a
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75484959 28 +  98207768 -TGC--T------GC-TTC--TG-----TAAAGGA----ATT--Tagctc-a
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67549275 28 +  89017189 -TGC--T------GC-TTC--TG-----TAAACGA----ATT--Tagctc-a
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74324378 28 +  97876770 -CGC--T------GC-TTC--TG-----TAAAGGA----ATT--Tagctc-a
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              7831 28 +     98495 CCAC--TCAG---GC-TTC--TT-----GGAAGGG----ATC--TA-----A
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 3 I 1
s Mustela_putorius.JH417978.1                             4419695 28 -  28371801 TCTC--TGAG---GG-TTC--TT-----GGTAAGA----ATT--ta-----a
i Mustela_putorius.JH417978.1                           I 3 I 914
s Myocastor_coypus.MyoCoy_scaffold_3653                     86802 28 -    117718 CCTC--TAAA---GC-TTT--TT-----GAAAGGA----ATT--TA-----A
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 3 C 0
s Myotis_brandtii.KE161952.1                               964627 28 +   8389877 gCTC--TAAA---GA-TTC--Ct-----ggtaaaa----ttt--ta-----a
i Myotis_brandtii.KE161952.1                            I 3 C 0
s Myotis_davidii.KB114863.1                               5016304 28 +   6462685 gCTC--TAAA---GA-TTC--ct-----ggtaaaa----ttt--ta-----a
i Myotis_davidii.KB114863.1                             I 3 C 0
s Myotis_lucifugus.GL429887.1                             3462213 28 -   3747815 gCTC--TAAG---GA-TTC--Ct-----ggtaaaa----ttt--ta-----a
i Myotis_lucifugus.GL429887.1                           I 3 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         7410 28 +     66751 GCTC--TAAA---GA-TTC--CT-----GGTAAAA----TTT--TA-----A
i Myotis_myotis.MyoMyo_scaffold_6123                    I 3 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             2163 12 -      8794 CCTC--TAAGGCTT--------------------------------------
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        I 3 I 5
s Nasalis_larvatus.k141_153429                               4481 28 +     48152 TCTC--TAAG---GC-TTC--TG-----GGAAAGG----AAT--TA-----G
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4481361 28 -  14209539 GCTC--TGAG---GC-TTC--TG-----GGTAAGA----ATT--TA-----A
i Neomonachus_schauinslandi.NINY01007774.1              I 3 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3948053 28 -   4490290 gcTC--TAAG---AC-TTC--TT-----GGTAAGA----ATT--TA-----A
i Neophocaena_asiaeorientalis.KZ688543.1                I 3 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  46414 28 +     94413 GCTC--AAAG---GC-TTA--TT-----GGCAAGG----ATT--TA-----A
i Noctilio_leporinus.NocLep_scaffold_12062              I 3 C 0
s Nomascus_annamensis.k141_1223136                          10248 28 -     11253 TCTC--TAAG---GC-GTC--TT-----GGAAAGG----AAC--TA-----G
i Nomascus_annamensis.k141_1223136                      C 0 C 0
s Nomascus_concolor.k141_190193                               504 28 -      1094 TCTC--TAAG---GC-TTC--TT-----GGAAAGG----AAC--TA-----T
i Nomascus_concolor.k141_190193                         I 2 I 62
s Nomascus_gabriellae.k141_906566                             880 28 -      2544 TCTC--TAAG---GC-GTC--TT-----GGAAAGG----AAC--TA-----G
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             21354 28 -  18771707 TCTC--TAAG---GC-TTC--TT-----GGAAAGG----AAC--TA-----G
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_844529                                   629 28 +      2124 TCTC--TAAG---GC-TTC--TT-----GGAAAGG----AAC--TA-----T
i Nomascus_siki_a.k141_844529                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                26818 28 +   3668941 GCTA--TAAG---TC-TTC--TT-----GGTAAGA----ATT--TA-----A
i Nyctereutes_procyonoides.CAJHUB010000786.1            I 3 C 0
s Nycticebus_bengalensis.LG16                            65563656 28 -  95554990 CCTC--GAAG---GC-TAC--TT-----GGAAAGG----ATT--TA-----G
i Nycticebus_bengalensis.LG16                           I 3 C 0
s Nycticebus_coucang.k141_2051882                             501 28 +      6470 CCTC--GAAG---GC-TAC--TT-----GGAAAGG----ATT--TA-----G
i Nycticebus_coucang.k141_2051882                       I 3 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65666025 28 +  89412551 CCTC--GAAG---GC-TAC--TT-----GGAAAGG----ATT--TA-----G
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     I 3 C 0
s Ochotona_princeps.JH802095.1                            4992344 27 -  23139505 -TAT--TAAG---TA-TTT--TT-----AGAAAGG----GCT--TT-----G
i Ochotona_princeps.JH802095.1                          I 3 C 0
s Octodon_degus.JH651621.1                                3675534 28 +  10294119 CTTC--TAAA---GC-TTT--TT-----GAAAGGA----ATT--TA-----A
i Octodon_degus.JH651621.1                              I 3 C 0
s Odobenus_rosmarus.KB229369.1                             676019 28 -   3126709 GCTC--TGAG---GC-TTC--TT-----GGTAAGA----ATT--TA-----A
i Odobenus_rosmarus.KB229369.1                          I 3 C 0
s Odocoileus_virginianus.KZ101650.1                       1076836 28 +   1425656 TCTC--TAAG---AC-TTC--TT-----GGTAAGA----ATT--GA-----A
i Odocoileus_virginianus.KZ101650.1                     I 3 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         33998 28 +     78940 TCTC--TAAG---AC-TTC--TT-----GGTAAGA----ATT--GA-----A
i Okapia_johnstoni.LVCL01S0017931.1                     I 3 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  121300 28 +    145789 -TGA--T------GG-TTC--TG-----AGAAGAA----ATT--TAGCAC-A
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  33252 18 +     62360 ---------------------TG-----AGAAGAA----ATT--TA--ACAA
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7221737 28 -   7562323 gcTC--TAAG---AC-TTC--TC-----GGTAAGG----ATT--TA-----A
i Orcinus_orca.KB316965.1                               I 3 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              39990 28 -     66828 CCTC--CAGT---GA-TTT--TT-----GGTAAGG----ATT--TA-----A
i Orycteropus_afer.OryAfe_flattened_line_13509          I 3 C 0
s Oryctolagus_cuniculus.CM000803.1                      141872330 28 + 163896628 CTTC--TAAT---TC-TTC--TT-----AGAAAGG----ACT--TC-----A
i Oryctolagus_cuniculus.CM000803.1                      I 3 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      304153 28 -    505867 GCTA--TAAG---TC-TTC--TT-----GGTAAGA----ATT--TA-----A
i Otocyon_megalotis.JAEUCK010005121.1                   I 3 C 0
s Otolemur_crassicaudatus.k141_321880                       35669 28 +     38679 CCTC--TAAG---GC-TCC--TT-----GGAAAGG----ATT--TA-----G
i Otolemur_crassicaudatus.k141_321880                   I 3 C 0
s Otolemur_garnettii.GL873528.1                          18005110 28 -  38779656 CCTC--TAAG---GC-TCC--TT-----GGAAAGG----ATT--TA-----G
i Otolemur_garnettii.GL873528.1                         I 3 C 0
s Ovis_aries.CM001582.2                                 134074414 28 - 275406953 TCTC--TAAG---AC-TTC--TT-----GGTAAGA----ATT--GA-----A
i Ovis_aries.CM001582.2                                 I 3 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      75628 28 +    140051 TCTC--TAAG---AC-TTC--TT-----GGTAAGA----ACT--GA-----A
i Ovis_canadensis.OviCan_scaffold_6251                  I 3 C 0
s Pan_paniscus.CM003386.1                               127571112 28 - 205426864 TCTC--TAAG---GC-TTC--TT-----GGAAAGG----AAC--TA-----G
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120148259 28 - 196562556 TCTC--TAAG---GC-TTC--TT-----GGAAAGG----AAC--TA-----G
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  30616 28 +    295523 GTTC--TAAA---GC-TTC--TT-----GGTAAGG----ATT--TA-----A
i Panthera_onca.PanOnc_flattened_line_1615              I 3 C 0
s Panthera_pardus.KV860323.1                              3634220 28 +  18214204 GTTC--TAAA---GC-TTC--TT-----GGTAAGG----ATT--TA-----A
i Panthera_pardus.KV860323.1                            I 3 C 0
s Panthera_tigris.KE721879.1                              5023997 28 -   6340057 GTTC--TAAA---GC-TTC--TT-----GGTAAGG----ATT--TA-----A
i Panthera_tigris.KE721879.1                            I 3 C 0
s Pantholops_hodgsonii.KE114631.1                         1063272 28 -   1292953 TCTC--TAAG---AC-TTC--TT-----GGTAAGA----ATT--GA-----A
i Pantholops_hodgsonii.KE114631.1                       I 3 C 0
s Papio_anubis.CM001492.2                               188152227 28 - 188283584 TCTC--TAAG---GA-TTC--TT-----GGAAAGG----AAT--TA-----g
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            48439 28 +     76494 TCTC--TAAG---GA-TTC--TT-----GGAAAGG----AAT--TA-----G
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47509623 28 +  47705337 TCTC--TAAG---GA-TTC--TT-----GGAAAGG----AAT--TA-----G
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 63606 28 -    104429 TCTC--TAAG---GA-TTC--TT-----GGAAAGG----AAT--TA-----G
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  13390 28 -     29451 TCTC--TAAG---GA-TTC--TT-----GGAAAGG----AAT--TA-----G
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                33795 28 +     35859 TCTC--TAAG---GA-TTC--TT-----GGAAAGG----AAT--TA-----G
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    111948 28 -    135482 GCTC--TAAG---GC-TTC--TA-----GGTAGGG----ATT--TA-----A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 I 3 C 0
s Perodicticus_ibeanus.k141_117958                           1897 24 -     23713 CCTC--TAAG---GC-TAC--TT-----GGAAAGG----AT-----------
i Perodicticus_ibeanus.k141_117958                      I 3 C 0
s Perodicticus_potto.k141_713187                            21194 24 -     27972 CCTC--TAAG---GC-TAC--TT-----GGAAAGG----AT-----------
i Perodicticus_potto.k141_713187                        I 3 C 0
s Peromyscus_maniculatus.KI615518.1                       4946424 19 -   8017169 ---------------------TG-----AGAAGAA----ATT--TAgcac-a
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            118354 28 -    122454 GCTG--TAAG---AC-TTC--TT-----GGTAAGA----ATT--TA-----A
i Phocoena_phocoena.PhoPho_flattened_line_11948         I 3 C 0
s Piliocolobus_badius.k141_1497351                           1482 28 -      3310 TCTC--TAAG---GC-TTC--TG-----GGAAAGG----AAT--TA-----G
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       21388 28 -     82327 TCTC--TAAG---GC-TTC--TG-----GGAAAGG----AAT--TA-----G
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           18139 28 +     19957 TCTC--TAAG---GC-TTC--TG-----GGAAAGG----AAT--TA-----G
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26736148 28 +  26888534 TCTC--TAAG---GC-TTC--TG-----GGAAAGG----AAT--TA-----g
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            93400 28 +    112873 GTTC--TAAA---GA-TTC--CT-----GGTAAAA----TTT--TA-----A
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        I 3 C 0
s Pithecia_albicans.k141_991845                             39994 28 -     61926 GCTC--TAAG---GC-TTC--CT-----GGAAAGG----ATT--AA-----A
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        21423 28 +     78826 GCTC--TAAG---GC-TTC--CT-----GGAAAGG----ATT--AA-----A
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              5374 28 -     15800 GCTC--TAAG---GC-TTC--CT-----GGAAAGG----ATT--AA-----A
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                         8572 28 -     16101 GCTC--TAAG---GC-TTC--CT-----GGAAAGG----ATT--AA-----A
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          1881 28 +      9673 GCTC--TAAG---GC-TTC--CT-----GGAAAGG----ATT--AA-----A
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13470875 28 -  19735023 GCTC--TAAG---GC-TTC--CT-----GGAAAGG----ATT--AA-----A
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                            9783 28 -     31692 GCTC--TAAG---AC-TTC--CT-----GGAAAGG----ATT--AA-----A
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           2421 28 +     21690 GCTC--TAAG---AC-TTC--TT-----GGTAAGA----ATT--TA-----A
i Platanista_gangetica.PlaMin_flattened_line_72990      I 3 C 0
s Plecturocebus_bernhardi.k141_959214                       19175 28 +     44506 GCTC--TAAG---CC-TTC--TT-----GAAAAGG----ATT--AA-----A
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        19393 28 +     67491 GCTC--TAAG---CC-TTC--TT-----GAAAAGG----ATT--AA-----A
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                       9638 28 -     98129 GCTC--TAAG---CC-TTC--TT-----GAAAAGG----ATT--AA-----A
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     19238 28 +    147771 GCTC--TAAG---CC-TTC--TT-----GAAAAGG----ATT--AA-----A
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        19489 28 -     23762 GCTC--TAAG---CC-TTC--TT-----GAAAAGG----ATT--AA-----A
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_2078842                         19437 28 -     19696 GCTC--TAAG---CC-TTC--TT-----GAAAAGG----ATT--AA-----A
i Plecturocebus_dubius.k141_2078842                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         19311 28 +    152463 GCTC--TAAG---CC-TTC--TT-----GAAAAGG----ATT--AA-----A
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      6068 28 +      8943 ACTC--TAAG---CC-TTC--TT-----GAAAAGG----ATT--AA-----A
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                          9028 28 +    134592 GCTC--TAAG---CC-TTC--TT-----GAAAAGG----ATT--AA-----A
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          19621 28 -     75465 GCTC--TAAG---CC-TTC--TT-----GAAAAGG----ATT--AA-----A
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              183665 28 -    373494 GCTC--TAAG---GC-TTC--TT-----GGAAAGG----AAC--TA-----g
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19803569 28 +  19899266 GCTC--TAAG---GC-TTC--TT-----GGAAAGG----AAC--TA-----G
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               1718 28 -     15069 TCTC--TAAG---GC-TTC--TG-----GGAAAGG----AAT--TA-----G
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              1852 28 +     14865 TCTC--TAAG---GC-TTC--TG-----GGAAAGG----AAT--TA-----G
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                73045 28 +     78963 CTTC--CCAT---GT-GTC--TT-----GGTAAGC----ATT--TA-----A
i Procavia_capensis.ProCapCap_scaffold_15315            I 3 C 0
s Prolemur_simus.MPIZ01000048.1                           6845055 28 +  12164890 CCTC--TAAG---GC-TCC--TT-----GGAAAGG----ATT--TA-----g
i Prolemur_simus.MPIZ01000048.1                         I 3 C 0
s Propithecus_coquerelli.NW_012147863.1                     13490 28 -     30946 CCTC--TAAG---GC-TTC--TT-----GGAAAGA----ATT--ta-----g
i Propithecus_coquerelli.NW_012147863.1                 I 3 C 0
s Propithecus_coronatus.k141_1353159                          195 28 +     11805 CCTC--TAAG---GC-TTC--TT-----GGAAAGG----ATT--TA-----G
i Propithecus_coronatus.k141_1353159                    I 3 C 0
s Propithecus_diadema.k141_577245                           39524 28 +     52369 CCTC--TAAG---GC-TTC--TT-----GGAAAGG----ATT--TA-----G
i Propithecus_diadema.k141_577245                       I 3 C 0
s Propithecus_edwardsi.k141_1317105                         31913 28 -     44753 CCTC--TAAG---GC-TTC--TT-----GGAAAGG----ATT--TA-----G
i Propithecus_edwardsi.k141_1317105                     I 3 C 0
s Propithecus_perrieri.k141_7554                            13835 28 +     27322 CCTC--TAAG---GC-TTC--TT-----GGAAAGG----ATT--TA-----G
i Propithecus_perrieri.k141_7554                        I 3 C 0
s Propithecus_tattersalli.k141_907138                       13479 28 -     53241 CCTC--TAAG---GC-TTC--TT-----GGAAAGA----ATT--TA-----G
i Propithecus_tattersalli.k141_907138                   I 3 C 0
s Propithecus_verreauxi.k141_158021                         35751 28 -     48185 CCTC--TAAG---GC-TTC--TT-----GGAAAGA----ATT--TA-----G
i Propithecus_verreauxi.k141_158021                     I 3 C 0
s Psammomys_obesus.NESX01026517.1                           29259 28 +     77221 -CAC--T------GG-TTC--TG-----AAAAGGA----ATT--TAGcac-c
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                             975 24 -     27784 GTTC--AAAG---GC-TTA--CT-----GCTAAAG----AT-----------
i Pteronotus_parnellii.KE867983.1                       I 3 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        241554 28 -    344369 TCTC--TGAG---GG-TTC--TT-----GGTAAGA----ATT--TA-----A
i Pteronura_brasiliensis.PteBra_flattened_line_1343     I 3 I 928
s Pteropus_alecto.KB031157.1                             13243091 28 -  17261082 GTTC--TGAG---GC-TTC--TT-----CATAAGG----ATT--TA-----A
i Pteropus_alecto.KB031157.1                            I 3 C 0
s Pteropus_vampyrus.KN525959.1                             601045 28 -   3946241 GTTC--TGAG---GC-TTC--TT-----CATAAGG----ATT--TA-----A
i Pteropus_vampyrus.KN525959.1                          I 3 C 0
s Puma_concolor.QAVW01000427.1                          131530813 28 - 161321710 GTTC--TAAA---GC-TTC--TT-----GGTAAGG----ATT--TA-----A
i Puma_concolor.QAVW01000427.1                          I 3 C 0
s Pygathrix_cinerea.k141_374971                             25843 28 +     56732 TCTC--TAAG---GC-TTC--TG-----GGAAAGG----AAT--TA-----G
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6802333 28 +   6970761 TCTC--TAAG---GC-TTC--TG-----GGAAAGG----AAT--TA-----G
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             1725 28 +     18040 TCTC--TAAG---GC-TTC--TG-----GGAAAGG----AAT--TA-----G
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                12922 28 +     68503 TCTC--TAAG---AC-TTC--TT-----GGTAAGA----ATT--GA-----A
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 3 C 0
s Rattus_norvegicus.chr11                                13911201 28 +  90463843 -TGC--T------GC-TTT--TG-----TGAAGGA----att--cagaat-a
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1784692 28 +   2252614 GCTG--TAAG---TC-TTC--TT-----AGTAAGG----ATT--Ta-----a
i Rhinolophus_sinicus.LVEH01000179.1                    I 3 C 0
s Rhinopithecus_bieti.k119_102124                           12280 28 -     14454 TCTC--TAAG---GC-TTC--TG-----GGAAAGG----AAT--TA-----G
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206373606 28 - 206558726 TCTC--TAAG---GC-TTC--TG-----GGAAAGG----AAT--TA-----g
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44851254 28 -  45163003 TCTC--TAAG---GC-TTC--TG-----GGAAAGG----AAT--TA-----G
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                16394 28 +    109198 TTTT--TGAG---GC-TTC--TT-----CATAAGG----ATT--TA-----A
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            I 3 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       4700 28 +     12214 TCTC--TGAG---GC-TTC--TT-----GGTAAGA----ACT--GA-----A
i Saiga_tatarica.SaiTat_scaffold_82192                  I 3 C 0
s Saimiri_boliviensis.NW_024100938.1                     15669046 28 -  43202129 GCTC--TAAG---GC-TTC--TT-----GGAAAGG----ATT--AA-----A
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                         921 28 +     34089 GCTC--TAAG---GC-TTC--TT-----GGAAAGG----ATT--AA-----A
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                               852 28 -     60842 GCTC--TAAG---GC-TTC--TT-----GGAAAGG----ATT--AA-----A
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                               921 28 +     67014 GCTC--TAAG---GC-TTC--TT-----GGAAAGG----ATT--AA-----A
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                               921 28 +     60816 GCTC--TAAG---GC-TTC--TT-----GGAAAGG----ATT--AA-----A
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                  849 28 -     76454 GCTC--TAAG---GC-TTC--TT-----GGAAAGG----ATT--AA-----A
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17337429 28 -  30362882 GCTC--TAAG---GC-TTC--TT-----AGAAAGG----ATT--AA-----A
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         17030 28 -     62485 GCTC--TAAG---GC-TTC--TT-----GGAAAGG----ATT--AA-----A
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   28452 23 -    114521 -------AAT---GT-TTC--TT-----GGTAAAG----ATT--TG-----A
i Scalopus_aquaticus.ScaAqu_scaffold_9300               I 6 C 0
s Semnopithecus_entellus.k141_1527475                       24268 28 +     26421 TCTC--TAAG---GC-TTC--TG-----GGAAAGG----AAT--TA-----G
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       4730 28 +     20762 TCTC--TAAG---GC-TTC--TG-----GGAAAGG----AAT--TA-----G
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         38463 28 +     40653 TCTC--TAAG---GC-TTC--TG-----GGAAAGG----AAT--TA-----G
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                            9022 28 -     12194 TCTC--TAAG---GC-TTC--TG-----GGAAAGG----AAT--TA-----G
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     22441 28 -     27512 TCTC--TAAG---GC-TTC--TG-----GGAAAGG----AAT--TA-----G
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         31462 28 -     33692 TCTC--TAAG---GC-TTC--TG-----GGAAAGG----AAT--TA-----G
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   94489 28 -    120886 -TGC--T------GT-TTC--TG-----AGATGGA----CTT--TAAGAC-A
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            14693 28 +    739146 ACTC--TAAG---GC-TTC--TT-----GGAAAGA----ATT--TA-----A
i Solenodon_paradoxus.SolPar_flattened_line_1012        I 6 C 0
s Spermophilus_dauricus.KZ294190.1                        2236458 28 +   2842873 TCTC--TGAG---GC-TCC--TT-----GAGAGGT----GTT--TA-----A
i Spermophilus_dauricus.KZ294190.1                      I 3 I 1
s Spilogale_gracilis.SpiGra_flattened_line_905             231264 28 -    276980 GCCC--TGAG---GG-TTC--TT-----GGTAAGG----ATT--TA-----A
i Spilogale_gracilis.SpiGra_flattened_line_905          I 3 I 215
s Suricata_suricatta.SurSur_flattened_line_20339            24061 27 +     62062 GCTC--TAAG----C-TTG--TT-----CGTAAGG----ATT--CA-----A
i Suricata_suricatta.SurSur_flattened_line_20339        I 3 C 0
s Sus_scrofa.CM000824.4                                 189268987 33 + 218635234 GTTT--TAAG---GT-TTC--TTAACTTGGTAAGA----ATT--TA-----A
i Sus_scrofa.CM000824.4                                 I 3 C 0
s Symphalangus_syndactylus.tarseq_24                     13898392 28 +  13920577 TCTC--TAAG---GC-TTC--TT-----GGAAAGG----AAC--TA-----G
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               2901 22 -      6213 --------AA---GA-TTC--CT-----GGTAAAG----ATT--TA-----A
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 I 8
s Tamandua_tetradactyla.TamTet_scaffold_26877               11841 12 +     45698 CCTC--TAAGGCTT--------------------------------------
i Tamandua_tetradactyla.TamTet_scaffold_26877           I 3 I 5
s Tapirus_indicus.TapInd_scaffold_176                      803839 28 +   1148477 TCTC--TAAG---GC-TTC--TT-----AGTAAGG----ATT--TA-----A
i Tapirus_indicus.TapInd_scaffold_176                   I 3 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  54501 28 +     99546 TCTC--TAAG---GC-TTC--TT-----AGTAAGG----ATT--TA-----A
i Tapirus_terrestris.TapTer_scaffold_14939              I 3 C 0
s Tarsius_lariang.k141_609102                               23183 28 +     42269 TCTC--TAAG---GC-TTC--TT-----GGGAAAG----ATT--TA-----G
i Tarsius_lariang.k141_609102                           I 3 C 0
s Tarsius_wallacei.k141_48636                               56497 28 +     65473 TCCC--TAAG---GC-TTC--TT-----GGGAAAG----ATT--TA-----G
i Tarsius_wallacei.k141_48636                           I 3 C 0
s Theropithecus_gelada.CM009951.1                       194003762 28 - 194193292 TCTC--TAAG---GC-TTC--TT-----GGAAAGG----AAT--TA-----G
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                   704  9 +      6782 CCTC--TAAA---T--------------------------------------
i Tolypeutes_matacus.TolMat_scaffold_269431             I 3 I 5
s Tonatia_saurophila.TonSau_scaffold_3334                  132980 28 -    259118 GCTC--AAAG---GC-TTA--TT-----GGTAAAT----ATT--TA-----A
i Tonatia_saurophila.TonSau_scaffold_3334               I 3 C 0
s Trachypithecus_auratus.k141_738098                        22840 28 +     38948 TCTC--TAAG---GC-TTC--TG-----GGAAAGG----AAT--TA-----G
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   16567 28 -     32910 TCTC--TAAG---GC-TTC--TG-----GGAAAGG----AAT--TA-----G
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       22465 28 +     24652 TCTC--TAAG---GC-TTC--TG-----GGAAAGG----AAT--TA-----G
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      1350 28 -      3559 TCTC--TAAG---GC-TTC--TG-----GGAAAGG----AAT--TA-----G
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           39289 28 -     54611 TCTC--TAAG---GC-TTC--TG-----GGAAAGG----AAT--TA-----G
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       15288 28 +     17312 TCTC--TAAG---GC-TTC--TG-----GGAAAGG----AAT--TA-----G
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    22658 28 -     25040 TCTC--TAAG---GC-TTC--TG-----GGAAAGG----AAT--TA-----G
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          1324 28 +      3528 TCTC--TAAG---GC-TTC--TG-----GGAAAGG----AAT--TA-----G
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  47686 28 +     51589 TCTC--TAAG---GC-TTC--TG-----GGAAAGG----AAT--TA-----G
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       10854 28 +     14732 TCTC--TAAG---GC-TTC--TG-----GGAAAGG----AAT--TA-----G
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       1332 28 -     28054 TCTC--TAAG---GC-TTC--TG-----GGAAAGG----AAT--TA-----G
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44656127 28 -  44834318 TCTC--TAAG---GC-TTC--TG-----GGAAAGG----AAT--TA-----G
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        1137 28 +      3372 TCTC--TAAG---GC-TTC--TG-----GGAAAGG----AAT--TA-----G
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   2337 28 +     90398 GCTC--AAAG---AG-TTC--TT-----GCTAAGA----ACT--GA-----A
i Tragulus_javanicus.TraJav_scaffold_14717              I 3 C 0
s Trichechus_manatus.JH594618.1                          16078430 28 +  31416278 CCCC--CAAT---AT-GTC--TT-----GGTAAGC----ATT--TA-----A
i Trichechus_manatus.JH594618.1                         I 3 C 0
s Tupaia_chinensis.KB320831.1                             2788266 11 -   3938065 CTTC--TTAG---GC-T-----------------------------------
i Tupaia_chinensis.KB320831.1                           I 3 C 0
s Tupaia_tana.TupTan_flattened_line_68454                     827 11 +     13056 CTTC--TTAG---GC-C-----------------------------------
i Tupaia_tana.TupTan_flattened_line_68454               I 3 C 0
s Tursiops_truncatus.MRVK01000923.1                      69310455 28 -  96451834 gcTC--TAAG---AC-TTC--TC-----GGTAAGG----ATT--TA-----A
i Tursiops_truncatus.MRVK01000923.1                     I 3 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 23657 23 -     25548 -------AAT---GT-TTC--TT-----GGTGAAG----ATT--AG-----A
i Uropsilus_gracilis.UroGra_scaffold_4143_0             I 6 C 0
s Ursus_maritimus.KK498671.1                              6511069 28 +  28682327 GCTC--TAAG---GC-TTC--GT-----GGTAAGA----ATT--TA-----A
i Ursus_maritimus.KK498671.1                            I 3 C 0
s Varecia_rubra.k141_432109                                  1998 28 -     20643 CCTC--CAAG---GC-TTC--TT-----GGAAAGG----ATT--TA-----G
i Varecia_rubra.k141_432109                             I 3 C 0
s Varecia_variegata.k141_775891                             21543 28 -     33872 CCTC--CAAG---GC-TTC--TT-----GGAAAGG----ATT--TA-----G
i Varecia_variegata.k141_775891                         I 3 C 0
s Vicugna_pacos.KN269600.1                                1521774 28 -   2331223 TCTC--TAAG---GC-TTC--TT-----GGTAAGA----ATG--TA-----A
i Vicugna_pacos.KN269600.1                              I 3 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                134223 28 -    281493 GCTA--TAAG---TC-TTC--TT-----GGTAAGA----ATT--TA-----A
i Vulpes_lagopus.VulLag_flattened_line_2045             I 3 C 0
s Xerus_inauris.XerIna_scaffold_7898                       123545 28 -    134049 CCTC--TAAG---GC-TCC--TT-----GAAAGGT----ATT--TA-----A
i Xerus_inauris.XerIna_scaffold_7898                    I 3 I 1
s Zalophus_californianus.ZalCal_flattened_line_4097        210747 28 -    227762 GCTC--TGAG---GC-TTC--TT-----GGTAAGA----ATT--TA-----A
i Zalophus_californianus.ZalCal_flattened_line_4097     I 3 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           3958 28 -      8775 GCTC--TAAG---AC-TTC--TT-----GGTAAGA----ATT--TA-----A
i Ziphius_cavirostris.ZipCav_flattened_line_127025      I 3 C 0
e Perognathus_longimembris.PerPac_flattened_line_22291      39705  3 -     45160 I
e Dipodomys_stephensi.DipSte_scaffold_44365                 23717  3 +     28912 I
e Dipodomys_ordii.KN672545.1                              3652163  3 +   4240102 I
e Chrysochloris_asiatica.ChrAsi_scaffold_141308              5625 53 -     12508 M
e Megaderma_lyra.MegLyr_scaffold_3562                       61508  0 -    234502 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16291  1 -    119109 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     12283  2 -     20485 I
e Jaculus_jaculus.JH725517.1                              8561873  2 +  11848649 I
e Allactaga_bullata.AllBul_scaffold_70162                    8911  2 -     22067 I
e Nannospalax_galili.KL201303.1                            107449  0 +    362372 C
e Dolichotis_patagonum.DolPat_scaffold_14102                33375  0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             56104 16 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                14631 16 +     26546 I
e Cricetulus_griseus.LT883672.1                          53025429  0 +  72327488 C
e Cavia_tschudii.CavTsc_scaffold_488                       173989  0 +    436027 C
e Cavia_porcellus.DS562889.1                             15795798  0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15783848 16 -  24422027 I

a score=0.000000
s hg38.chr4_GL000008v2_random                                8405 8 +    209709 CTGCCTGA
s Acinonyx_jubatus.LLWD01000356.1                         2030501 4 +   3721120 ----CTGA
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    108763 4 -    189883 TCTT----
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 I 2
s Ailuropoda_melanoleuca.LNAT01000321.1                  10653822 4 +  23371972 ----CGGA
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7090523 4 -  16596857 ----agga
i Ailurus_fulgens.LNAC01000003.1                        I 1 C 0
s Allenopithecus_nigroviridis.k141_3103707                  59428 8 +     61638 CTGCCTGA
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        51236 8 +     53391 CTGCCTGA
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         1960 8 +     72529 CTGCCTGA
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          1536 8 +      3797 CTGCCTGA
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             6629 8 -     18050 CTCCCTGA
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  7746 8 -     11521 CTCCCTGA
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              7304 8 -     21359 CTCCCTGA
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1856473                                5687 8 +      7227 CTCCCTGA
i Alouatta_juara.k141_1856473                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          6601 8 -     10438 CTCCCTGA
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            3256 8 +      7047 CTCCCTGA
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             6540 8 +     10410 CTCCCTGA
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1374428                             343 8 -     25526 CTCCCTGA
i Alouatta_puruensis.k141_1374428                       C 0 C 0
s Alouatta_seniculus.k141_990213                             3261 8 +      6429 CTCCCTGA
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3517271 6 +   4113121 CTCT--GA
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      387456 6 -    631301 CTCT--GA
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            27904 6 +     33004 CACT--GA
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 58935 8 +     78111 CTCTCTGA
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            1866 8 +     22701 CTCCCTAA
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5745826 8 +   9889416 CTCTCTGA
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             2418 8 -    104377 CTCCCTGA
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               2418 8 +     23246 CTCCCTGA
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                      445 1 +      5067 T-------
i Aplodontia_rufa.AprRuf_scaffold_156013                I 1 C 0
s Arctocebus_calabarensis.k141_1161114                      14568 6 +     17483 CTCT--GA
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 5555 6 -     29036 CTGT--GA
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9535679 8 +  39197703 CTCCCTGA
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             56967 8 +     85812 CTCCCTGA
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 7964 8 +     89302 CTCCCTGA
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             12473 8 -     58268 CTCCCTGA
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             60461 8 +    119057 CTCCCTGA
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               2411 8 -     25888 CTCCCTGA
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 3273 8 -     16375 CTCTCTGA
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_767228                               9245 8 -      9688 CTCTCTGA
i Avahi_peyrierasi.k141_767228                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26377207 6 +  51448160 CTCT--GA
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        2438 6 -     13118 CTCT--GA
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   40371 6 -     72089 CTCT--GA
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6556518 6 +   6870073 CTCT--GA
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138136749 6 - 161108492 CTNT--GA
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     569127 6 -    998990 CTCT--GA
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136292482 6 - 158972876 CTCT--GA
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1228103 6 -   1914593 CTCT--GA
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               110309 8 -    171031 CTCTCTGA
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                  9335 8 +    125063 CTCTCTGA
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                11383 8 -    216513 CTCTCTGA
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        3922 8 -    134917 CTCTCTGA
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3216240 6 -   8989139 CTCT--GA
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           394424 6 -  15254737 CTCT--GA
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2970161 6 +   6889770 CTCT--GA
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11515206 4 +  39901454 ----TGGA
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   10223 4 +     87036 ----TGGA
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11261865 4 -  35597290 ----TGGA
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11084394 4 +  39895921 ----TGGA
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16451428 4 -  44759192 ----TGGA
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21322378 6 + 157394656 CTCT--GA
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135703605 6 - 157403528 CTCT--GA
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_647363                  1139 4 +      1887 GTTT----
i Capromys_pilorides.CapPil_scaffold_647363             C 0 C 0
s Carlito_syrichta.NW_007248099.1                          305721 8 +    345090 CTCTCTGA
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               56633 6 +     67245 CTTT--GA
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   27136 4 +     33760 GTTT----
i Castor_canadensis.CasCan_scaffold_47037               C 0 I 3
s Catagonus_wagneri.CatWag_scaffold_1305                   155949 4 -    276539 CT----GA
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18887148 8 -  29618158 CTCCCTGA
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 4694 8 -     26817 CTCCCTGA
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                 8934 8 +     25043 CTCCCTGA
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         4770 8 +     21754 CTCTCTGA
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4360418 6 +   7569818 --CTATGA
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_520758          420 6 -       446 --CTATGA
i Ceratotherium_simum_cottoni.CerCot_scaffold_520758    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6551224 8 +   6739814 ctgcctga
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      52701 8 -     54931 CTGCCTGA
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         17685 8 -     19697 CTGCCTGA
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         55216 8 -    107033 CTGCCTGA
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        1659 8 -      3853 CTGCCTGA
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          25591 8 +     30494 CTGCCTGA
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           1614 8 -      4022 CTGCCCGA
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          1506 8 -      3505 CTGCCTGA
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           20312 8 +     35983 CTGCCTGA
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11986834 8 +  12117833 CTGCCTGA
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46473587 8 +  46592721 CTGCCTGA
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      31414 8 +     33420 CTGCCTGA
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        1450 8 -      3443 CTGCCTGA
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      2441 8 -      4669 CTGCCTGA
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        2242 8 -      4411 CTGGCTGA
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         1765 8 -      4205 CTGCCCGA
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           55609 8 -     68416 CTCTCTGA
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            4658 8 +     13308 CTCTCTGA
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             1947 8 -     18223 CTCCCTGA
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             18970 8 +     25473 CTCCCTGA
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           38009 8 +     57117 CTCCCTGA
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          42684 8 +     54541 CTCCCTGA
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15958103 4 +  43084221 ACTT----
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         67530 8 +    196370 CTCTCTGA
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          11704 8 +     40510 CTCTCTGA
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15135045 8 -  15256731 CTGCCTGA
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      30091 8 -     53260 CTGCCTGA
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101140539 8 + 101219884 ctgcctga
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                13609 8 -     21363 ATCCCTGA
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           758915 8 +    964067 ATCCCTGA
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10879121 8 +  10971483 ttgcctga
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147660279 8 + 156195979 TTGCCTGA
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            12265 8 +     23629 CTGCCTGA
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60609879 8 +  78930452 CTCtctaa
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         36339 6 -     40477 CTCT--GA
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 274204 4 -    399297 TCTT----
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 I 2
s Crocidura_indochinensis.CroInd_scaffold_38409             15863 8 -     19186 GTCTCTGA
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            48528 4 -     70449 ----CTAA
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  204940 4 -    956709 TCTT----
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 27207 4 -     67205 GTTT----
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          178796 8 -   6883506 atccttga
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16841483 8 +  31942871 CTCTCTGA
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80033947 6 -  96802777 CTCT--GA
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18695943 6 -  18957592 CTCT--GA
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 319075 6 +    993696 --CCATGC
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_170113                  338 6 +       818 --CTATGA
i Diceros_bicornis.DicBicMic_scaffold_170113            C 0 C 0
s Echinops_telfairi.JH980316.1                           22991213 8 -  44670279 GCCTCCAG
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                  9326 6 +     24177 CTCT--CT
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1488641 6 +   1727528 CTCT--GA
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7803374 8 +  15467074 CACTTGAA
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        235850 4 -    369425 gctt----
i Ellobius_lutescens.LOEQ01003611.1                     C 0 I 2
s Ellobius_talpinus.LOJH01090055.1                           2858 4 -      7838 GCTT----
i Ellobius_talpinus.LOJH01090055.1                      C 0 I 2
s Enhydra_lutris.KZ291749.1                              85868244 4 +  99434291 ----gaga
i Enhydra_lutris.KZ291749.1                             I 930 C 0
s Equus_asinus.JREZ01000062.1                             5849805 6 -   7175178 --CTGTGA
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13348308 6 +  41866177 --CTGTGA
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                           9798 6 +     92910 --CTGTGA
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erythrocebus_patas.Contig8                             48767224 8 -  48907691 CTCCCTGA
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          312091 6 +    330699 CTCT--GA
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             58520 6 +     89355 CTCT--GA
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              1680 8 +     13586 CTCTCTGA
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               1616 8 -      6809 CTCTCTGA
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             8087 8 +     36558 ATCTCTGA
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             4404 8 +     60246 CTCTCTGA
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 7892 8 +    109717 CTCTCTGA
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               12266 8 +     16540 CTCTCTGA
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                12543 8 +     27497 CTCTCTGA
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           14999 8 +     26808 CTCTCTGA
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                29733 8 +     46535 CTCTCTGA
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              12456 8 -     29447 CTCTCTGA
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129889481 4 - 159252932 ----CTGA
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129276555 4 - 158578461 ----CTGA
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 17690 4 +     52776 ----CTGA
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13889689 4 -  19261668 atat----
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     207629 8 -    847004 CTCTCTGA
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           10009 8 -     43889 CTCTCTGA
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           7058 8 +     27357 CTCTCTGA
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               152939 8 +    324696 TTCTCTGA
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    178154 6 -    189561 CTCT--GA
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                            9348 4 -     18683 TCTA----
i Glis_glis.GliGli_scaffold_79770                       I 1 C 0
s Gorilla_beringei.k141_111300                               1798 8 -     14630 CTGCCTGA
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119648896 8 - 195582420 ctgcctga
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   73902 2 +    118900 --TA----
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                         2227 8 +      3980 CTCTCTGA
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             24707 8 +     26611 CTCTCTGA
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             2161 8 +     56096 CTCTCTGA
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        25434 8 -     42470 CTCTCTGA
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        42031 8 -     54384 CTCTCTGA
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              13731 4 +     53719 ----CTGA
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                24640 6 -     91191 CTCT--GA
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2547800 4 +  31725842 atat----
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               53209 8 +     73687 TCTTGTAA
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              144214 6 +    277961 CTCT--GA
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      275637 6 -    477199 CTCT--GA
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              4791 6 -      9143 CTCT--GA
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg649                                    98470 8 +    115816 CTGCCTGA
i Hoolock_leuconedys.ctg649                                C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 12800 4 -     67322 ----CTGA
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hylobates_abbotti.k141_493872                              1607 8 +      5897 CTGCCTGA
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_282275                                820 8 +      1846 CTGCCTGA
i Hylobates_agilis.k141_282275                          C 0 C 0
s Hylobates_klossii.k141_466549                              8065 8 +     11537 CTGCCTGA
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_muelleri.k141_1133650                            1042 8 -      2775 CTGCCTGA
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             29644 8 -     60944 CTGCCTGA
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     2770 4 +     22540 ATTT----
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7122563 4 +  13083262 TCTT----
i Ictidomys_tridecemlineatus.JH393315.1                 I 1 C 0
s Indri_indri.k141_3334527                                   8671 8 +      9207 CTCTCTGA
i Indri_indri.k141_3334527                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               5874 6 +     17520 CTCT--GA
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               20706 6 +     37189 CTCT--GA
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          46522 8 -    147782 CTCCCCGA
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   110819 8 -    115756 CTCTCTGA
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258403710 8 - 285822530 CTCTCTGA
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        20604 8 +     39228 CTTTCTGA
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            49980 8 +     63517 TTTTCTGA
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        75200 8 +    116806 CTTTCTGA
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     28241 8 -     33031 CTTTCTGA
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3082490 4 -   3498232 ----TGGG
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                     9709 8 +     22452 CACTCCAA
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            133049 6 +   3060487 CTCC--GA
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19244310 8 +  19376315 CTGCCTGA
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            7354 8 +     84689 TGCTCTGA
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3775105 8 +   6799190 TGCTCTGA
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20587783 8 -  62548349 CCTTCTAA
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11083850 4 +  39895028 ----TGGA
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             15996 8 +     74745 CTGCCTGA
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12702502 8 +  12821369 CTGCCTGA
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               4595 8 +      6569 CTGCCTGA
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           42895 8 +     63263 CTGCCTGT
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_1068107                               11472 8 +     12679 CTGCCTGA
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                1045 8 +      3017 CTGCCTGA
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  42657 8 -     79256 CTGCCTGA
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196031577 8 + 196197964 ctgcctga
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11441681 8 +  11645122 ctgcctga
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   1607 8 -     46448 CTGCCTGA
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                1434 8 -      3617 CTGCCTGA
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 11767 8 -     55006 CTGCCTGA
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43836806 8 +  43892939 CTGCCTGA
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                4029 8 -      5978 CTGCCTGA
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               1609 8 -     27140 CTGCCTGA
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43433470 8 -  43563597 CTGCCTGA
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4446296 8 -   4543643 CTGCCTGA
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            143116 6 +    252755 CTCT--GA
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             33180 6 +     58827 CTCT--GA
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36870410 4 +  64221397 TCTT----
i Marmota_marmota.CZRN01000005.1                        I 1 C 0
s Mellivora_capensis.MelCap_flattened_line_1828            225742 4 -    226874 ----GGGA
i Mellivora_capensis.MelCap_flattened_line_1828         I 895 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233                8219 4 +     15977 TCTT----
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 I 2
s Mesocricetus_auratus.KB708139.1                         1043114 4 -  26018355 GCCT----
i Mesocricetus_auratus.KB708139.1                       C 0 I 2
s Mesoplodon_bidens.MesBid_scaffold_183284                    745 6 +      2166 GTCT--AA
i Mesoplodon_bidens.MesBid_scaffold_183284              C 0 C 0
s Microcebus_murinus.CM007691.1                          16506825 8 +  47401472 ctctctga
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  28159 8 -     48017 TCCTCCAG
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               19792 6 -     32043 CACT--GA
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22815997 4 -  98408828 gctt----
i Microtus_ochrogaster.CM001673.1                       C 0 I 2
s Miniopterus_natalensis.LDJU01000022.1                   8206511 8 +  10048721 CTCTCTGA
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            31192 8 +     45743 CTCTCTGA
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        32144 8 +     34273 CTGCCTGA
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         7788 4 -    104932 ----CGGG
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     2239 8 +      8497 ATCTCTGA
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 143472 6 +    154973 CTCT--GA
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                158112 6 +    265003 CTCT--GA
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 I 213
s Moschus_moschiferus.MosMos_scaffold_146101                 1739 6 -      4346 CTCT--GA
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  141421 4 -    168139 ----CTAA
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          16328 8 -    100666 CTCTCTGA
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70761863 4 +  92629107 tttt----
i Mus_caroli.LT608236.1                                 C 0 I 2
s Mus_musculus.chr16                                     75484987 4 +  98207768 attt----
i Mus_musculus.chr16                                    C 0 I 2
s Mus_pahari.LT608305.1                                  67549303 4 +  89017189 cttt----
i Mus_pahari.LT608305.1                                 C 0 I 2
s Mus_spretus.CM004110.1                                 74324406 4 +  97876770 attt----
i Mus_spretus.CM004110.1                                C 0 I 2
s Muscardinus_avellanarius.MusAve_scaffold_9643              7860 4 +     98495 TCTG----
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 1 C 0
s Mustela_putorius.JH417978.1                             4420637 4 -  28371801 ----ggaA
i Mustela_putorius.JH417978.1                           I 914 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     86830 4 -    117718 GTTT----
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               964655 8 +   8389877 atctctga
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5016332 8 +   6462685 atctctga
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3462241 8 -   3747815 atctctga
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         7438 8 +     66751 ATCTCTGA
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             2180 8 -      8794 ATCCATAA
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        I 5 C 0
s Nasalis_larvatus.k141_153429                               4509 8 +     48152 CTGCCTGA
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4481389 4 -  14209539 ----CGGG
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3948081 6 -   4490290 CTCT--GA
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  46442 8 +     94413 CTCTGTGA
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1223136                          10276 8 -     11253 CTGCCTGA
i Nomascus_annamensis.k141_1223136                      C 0 C 0
s Nomascus_concolor.k141_468488                               919 8 -      1482 CTGCCTGA
i Nomascus_concolor.k141_468488                         I 28 C 0
s Nomascus_gabriellae.k141_906566                             908 8 -      2544 CTGCCTGA
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             21382 8 -  18771707 CTGCCTGA
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_844529                                   657 8 +      2124 TTGCCTGA
i Nomascus_siki_a.k141_844529                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                26846 4 +   3668941 ----TGGA
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65563684 8 -  95554990 TTTTGTGA
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                             529 8 +      6470 TTTTGTGA
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65666053 8 +  89412551 CTCTGTGA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4992371 8 -  23139505 CACTCTGA
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3675562 4 +  10294119 GGTT----
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             676047 4 -   3126709 ----CGGG
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1076864 6 +   1425656 CTCT--GA
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         34026 6 +     78940 CTCT--GA
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  121328 4 +    145789 GCTT----
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 I 2
s Onychomys_torridus.OnyTor_scaffold_12578                  33270 4 +     62360 GCTT----
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 I 2
s Orcinus_orca.KB316965.1                                 7221765 6 -   7562323 CTCT--GA
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              40018 8 -     66828 TTCTATAA
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141872358 8 + 163896628 CActctaa
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      304181 4 -    505867 ----TGGA
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       35697 8 +     38679 CTCTCTGA
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18005138 8 -  38779656 CTCTCTGA
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134074442 6 - 275406953 CTCT--GA
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      75656 6 +    140051 CTCT--GA
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127571140 8 - 205426864 ctgcctga
i Pan_paniscus.CM003386.1                               C 0 I 1
s Pan_troglodytes.CM009241.2                            120148287 8 - 196562556 ctgcctga
i Pan_troglodytes.CM009241.2                            C 0 I 1
s Panthera_onca.PanOnc_flattened_line_1615                  30644 4 +    295523 ----CTGA
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3634248 4 +  18214204 ----CTGA
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5024025 4 -   6340057 ----CTGA
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1063300 6 -   1292953 CTCT--GA
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188152255 8 - 188283584 ctgcctga
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            48467 8 +     76494 CTGCCTGA
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47509651 8 +  47705337 CTGCCTGA
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 63634 8 -    104429 CTGCCTGA
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  13418 8 -     29451 CTGCCTGA
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                33823 8 +     35859 CTGCCTGA
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    111976 4 -    135482 ----CCGA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4946443 4 -   8017169 gctt----
i Peromyscus_maniculatus.KI615518.1                     C 0 I 2
s Phocoena_phocoena.PhoPho_flattened_line_11948            118382 6 -    122454 CTCT--GA
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           1510 8 -      3310 CTGCCTGA
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       21416 8 -     82327 CTGCCTGA
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           18167 8 +     19957 CTGCCTGA
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26736176 8 +  26888534 ctgcctga
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            93428 8 +    112873 CGCTCTGA
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             40022 8 -     61926 CTCCCTGA
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        21451 8 +     78826 CTCCCTGA
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              5402 8 -     15800 CTCCCTGA
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                         8600 8 -     16101 CTCCCTGA
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          1909 8 +      9673 CTCCCTGA
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13470903 8 -  19735023 TTCCCTGA
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                            9811 8 -     31692 CTCCCTGA
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           2449 6 +     21690 CTCT--GA
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       19203 8 +     44506 CTCCCTGA
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        19421 8 +     67491 CTCCCTGA
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                       9666 8 -     98129 CTCCCTGA
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     19266 8 +    147771 CTCCCTGA
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        19517 8 -     23762 CTCCCTGA
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_2078842                         19465 8 -     19696 CTCCCTGA
i Plecturocebus_dubius.k141_2078842                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         19339 8 +    152463 CTCCCTGA
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      6096 8 +      8943 CTCCTTGA
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                          9056 8 +    134592 CTCCCTGA
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          19649 8 -     75465 CTCCCTGA
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              183693 8 -    373494 ctgcctga
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19803597 8 +  19899266 CTGCCTGA
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               1746 8 -     15069 CTGCCTGA
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              1880 8 +     14865 CTGCCTGA
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                73073 8 +     78963 TCTTGTAA
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6845083 8 +  12164890 ctatctga
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     13518 8 -     30946 ctttctga
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                          223 8 +     11805 CTCTCTGA
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           39552 8 +     52369 CTCTCTGA
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         31941 8 -     44753 CTCTCTGA
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            13863 8 +     27322 CTCTCTGA
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       13507 8 -     53241 CTTTCTGA
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         35779 8 -     48185 CTTTCTGA
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           29287 4 +     77221 tctt----
i Psammomys_obesus.NESX01026517.1                       C 0 I 2
s Pteronura_brasiliensis.PteBra_flattened_line_1343        242510 3 -    344369 ----G-GA
i Pteronura_brasiliensis.PteBra_flattened_line_1343     I 928 C 0
s Pteropus_alecto.KB031157.1                             13243119 6 -  17261082 CACT--CT
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             601073 6 -   3946241 CACT--CT
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131530841 4 - 161321710 ----CTGA
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             25871 8 +     56732 CTGCCTGA
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6802361 8 +   6970761 CTGCCTGA
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             1753 8 +     18040 CTGCCTGA
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                12950 6 +     68503 CTCT--GA
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13911229 4 +  90463843 tttt----
i Rattus_norvegicus.chr11                               C 0 I 2
s Rhinolophus_sinicus.LVEH01000179.1                      1784720 6 +   2252614 ctct--ga
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           12308 8 -     14454 CTGCCTGA
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206373634 8 - 206558726 ctgcctga
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44851282 8 -  45163003 CTGCCTGA
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                16422 6 +    109198 CTCT--CT
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       4728 6 +     12214 CTCT--GA
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15669074 8 -  43202129 CTTCCTGA
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                         949 8 +     34089 CTTCCTGA
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                               880 8 -     60842 CTTCCTGA
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                               949 8 +     67014 CTTCCTGA
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                               949 8 +     60816 CTTCCTGA
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                  877 8 -     76454 CTTCCTGA
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17337457 8 -  30362882 CTCCCTGA
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         17058 8 -     62485 CTCCCTGA
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   28475 8 -    114521 CTCTCTAA
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1527475                       24296 8 +     26421 CTGCCTGA
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       4758 8 +     20762 CTGCCTGA
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         38491 8 +     40653 CTGCCTGA
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                            9050 8 -     12194 CTGCCTGA
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     22469 8 -     27512 CTGCCTGA
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         31490 8 -     33692 CTGCCTGA
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   94517 4 -    120886 GCTT----
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 I 2
s Solenodon_paradoxus.SolPar_flattened_line_1012            14721 8 +    739146 TTCTGTGA
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2236487 4 +   2842873 TCTT----
i Spermophilus_dauricus.KZ294190.1                      I 1 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             231507 4 -    276980 ----TGGA
i Spilogale_gracilis.SpiGra_flattened_line_905          I 215 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            24088 4 +     62062 ----CTGA
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189269020 6 + 218635234 CTGT--CA
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                     13898420 8 +  13920577 CTGCCTGA
i Symphalangus_syndactylus.tarseq_24                    C 0 I 4
s Tadarida_brasiliensis.TadBra_scaffold_148405               2742 8 -      6063 CTCTCTGA
i Tadarida_brasiliensis.TadBra_scaffold_148405          I 59 I 561
s Tamandua_tetradactyla.TamTet_scaffold_26877               11858 8 +     45698 ATCCATAA
i Tamandua_tetradactyla.TamTet_scaffold_26877           I 5 C 0
s Tapirus_indicus.TapInd_scaffold_176                      803867 6 +   1148477 --CTGTGA
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  54529 6 +     99546 --CTGCGA
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               23211 8 +     42269 CTCTCTGA
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               56525 8 +     65473 CTCTCTGA
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194003790 8 - 194193292 CTGCctga
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                   718 7 +      6782 ATCCTTG-
i Tolypeutes_matacus.TolMat_scaffold_269431             I 5 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  133008 6 -    259118 TTTT--GA
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        22868 8 +     38948 CTGCCTGA
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   16595 8 -     32910 CTGCCTGA
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       22493 8 +     24652 CTGCCTGA
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      1378 8 -      3559 CTGCCTGA
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           39317 8 -     54611 CTGCCTGA
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       15316 8 +     17312 CTGCCTGA
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    22686 8 -     25040 CTGCCTGA
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          1352 8 +      3528 CTGCCTGA
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  47714 8 +     51589 CTGCCTGA
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       10882 8 +     14732 CTGCCTGA
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       1360 8 -     28054 CTGCCTGA
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44656155 8 -  44834318 CTGCCTGA
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        1165 8 +      3372 CTGCCTGA
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   2365 6 +     90398 CACT--GA
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16078458 5 +  31416278 CC---TAA
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2788277 6 -   3938065 -ATTCTA-
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                     838 6 +     13056 -ATTCTA-
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69310483 6 -  96451834 CTCT--GA
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 23680 8 -     25548 TTTTCTAA
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6511097 4 +  28682327 ----CGGA
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  2026 6 -     20643 CTCTCT--
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             21571 6 -     33872 CTCTCT--
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1521802 6 -   2331223 CTCT--GA
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                134251 4 -    281493 ----TAGA
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       123574 4 -    134049 ACTT----
i Xerus_inauris.XerIna_scaffold_7898                    I 1 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        210775 4 -    227762 ----CGGG
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           3986 6 -      8775 CTCT--GA
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Perognathus_longimembris.PerPac_flattened_line_22291      39705 3 -     45160 I
e Dipodomys_stephensi.DipSte_scaffold_44365                 23717 3 +     28912 I
e Dipodomys_ordii.KN672545.1                              3652163 3 +   4240102 I
e Chrysochloris_asiatica.ChrAsi_scaffold_141308              5625 53 -     12508 M
e Pteronotus_parnellii.KE867983.1                             999 0 -     27784 C
e Megaderma_lyra.MegLyr_scaffold_3562                       61508 0 -    234502 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16291 1 -    119109 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     12283 2 -     20485 I
e Jaculus_jaculus.JH725517.1                              8561873 2 +  11848649 I
e Allactaga_bullata.AllBul_scaffold_70162                    8911 2 -     22067 I
e Perodicticus_potto.k141_713187                            21218 0 -     27972 C
e Perodicticus_ibeanus.k141_117958                           1921 0 -     23713 C
e Nannospalax_galili.KL201303.1                            107449 0 +    362372 C
e Dolichotis_patagonum.DolPat_scaffold_14102                33375 0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             56104 16 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                14631 16 +     26546 I
e Cricetulus_griseus.LT883672.1                          53025429 0 +  72327488 C
e Cavia_tschudii.CavTsc_scaffold_488                       173989 0 +    436027 C
e Cavia_porcellus.DS562889.1                             15795798 0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15783848 16 -  24422027 I

a score=0.000000
s hg38.chr4_GL000008v2_random                                8413 2 +    209709 T--T
s Acinonyx_jubatus.LLWD01000356.1                         2030505 1 +   3721120 T---
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    108769 2 -    189883 T--T
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 2 I 1
s Ailuropoda_melanoleuca.LNAT01000321.1                  10653826 1 +  23371972 T---
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7090527 1 -  16596857 t---
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allenopithecus_nigroviridis.k141_3103707                  59436 2 +     61638 T--T
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        51244 2 +     53391 T--T
i Allochrocebus_lhoesti.k141_4825038                    C 0 I 3
s Allochrocebus_preussi.k141_1202907                         1968 2 +     72529 T--T
i Allochrocebus_preussi.k141_1202907                    C 0 I 3
s Allochrocebus_solatus.k141_787528                          1544 2 +      3797 T--T
i Allochrocebus_solatus.k141_787528                     C 0 I 3
s Alouatta_belzebul.k141_1818029                             6637 2 -     18050 T--T
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  7754 2 -     11521 T--T
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              7312 2 -     21359 T--T
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1856473                                5695 2 +      7227 T--T
i Alouatta_juara.k141_1856473                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          6609 2 -     10438 T--T
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            3264 2 +      7047 T--T
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             6548 2 +     10410 T--T
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1374428                             351 2 -     25526 T--T
i Alouatta_puruensis.k141_1374428                       C 0 C 0
s Alouatta_seniculus.k141_990213                             3269 2 +      6429 T--T
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3517277 1 +   4113121 T---
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      387462 1 -    631301 T---
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            27910 1 +     33004 T---
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 58943 2 +     78111 T--T
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            1874 2 +     22701 T--T
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5745834 2 +   9889416 T--T
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             2426 2 -    104377 T--T
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               2426 2 +     23246 T--T
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                      446 2 +      5067 A--T
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 I 2
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 5561 1 -     29036 T---
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9535687 2 +  39197703 T--T
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             56975 2 +     85812 T--T
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 7972 2 +     89302 T--T
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             12481 2 -     58268 T--T
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             60469 2 +    119057 T--T
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               2419 2 -     25888 T--T
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 3281 2 -     16375 T--T
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_767228                               9253 2 -      9688 T--T
i Avahi_peyrierasi.k141_767228                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26377213 1 +  51448160 T---
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        2444 1 -     13118 T---
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   40377 1 -     72089 T---
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6556524 1 +   6870073 T---
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138136755 1 - 161108492 T---
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     569133 1 -    998990 T---
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136292488 1 - 158972876 T---
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1228109 1 -   1914593 T---
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               110317 2 -    171031 T--T
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                  9343 2 +    125063 T--T
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                11391 2 -    216513 T--T
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        3930 2 -    134917 T--T
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3216246 1 -   8989139 C---
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           394430 1 -  15254737 C---
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2970167 1 +   6889770 C---
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11515210 1 +  39901454 T---
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   10227 1 +     87036 T---
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11261869 1 -  35597290 T---
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11084398 1 +  39895921 T---
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16451432 1 -  44759192 T---
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21322384 1 + 157394656 T---
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135703611 1 - 157403528 T---
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_647363                  1143 1 +      1887 T---
i Capromys_pilorides.CapPil_scaffold_647363             C 0 C 0
s Carlito_syrichta.NW_007248099.1                          305729 2 +    345090 T--T
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               56639 1 +     67245 T---
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   27143 2 +     33760 T--T
i Castor_canadensis.CasCan_scaffold_47037               I 3 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   155953 1 -    276539 T---
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18887156 2 -  29618158 T--T
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 4702 2 -     26817 T--T
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                 8942 2 +     25043 T--T
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         4778 2 +     21754 T--T
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4360424 1 +   7569818 T---
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_520758          426 1 -       446 T---
i Ceratotherium_simum_cottoni.CerCot_scaffold_520758    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6551232 2 +   6739814 t--t
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      52709 2 -     54931 T--T
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         17693 2 -     19697 T--T
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         55224 2 -    107033 T--T
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        1667 1 -      3853 T---
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          25599 1 +     30494 T---
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           1622 1 -      4022 T---
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          1514 2 -      3505 T--T
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_1070855             0 1 -      1715 ---T
i Chaetophractus_vellerosus.ChaVel_scaffold_1070855     N 0 C 0
s Cercopithecus_lowei.k141_623764                           20320 1 +     35983 T---
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11986842 1 +  12117833 T---
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46473595 1 +  46592721 T---
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      31422 1 +     33420 T---
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        1458 1 -      3443 T---
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      2449 1 -      4669 T---
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        2250 1 -      4411 T---
i Cercopithecus_pogonias.k141_1977419                   C 0 I 2
s Cercopithecus_roloway.k141_3372345                         1773 1 -      4205 T---
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           55617 2 -     68416 T--T
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            4666 2 +     13308 T--T
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             1955 2 -     18223 T--T
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             18978 2 +     25473 T--T
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           38017 2 +     57117 T--T
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          42692 2 +     54541 T--T
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15958107 1 +  43084221 T---
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         67538 2 +    196370 T--T
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          11712 3 +     40510 TT-T
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15135053 2 -  15256731 T--T
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      30099 2 -     53260 T--T
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101140547 2 + 101219884 t--t
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                13617 2 -     21363 C--T
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           758923 2 +    964067 C--T
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10879129 2 +  10971483 t--t
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147660287 2 + 156195979 T--T
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            12273 2 +     23629 T--T
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60609887 1 +  78930452 t---
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         36345 1 -     40477 T---
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 274210 3 -    399297 T-GT
i Cricetomys_gambianus.CriGam_scaffold_949              I 2 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             15871 1 -     19186 T---
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            48532 1 -     70449 T---
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  204944 2 -    956709 T--T
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 27211 1 -     67205 T---
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          178804 2 -   6883506 t--t
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16841491 2 +  31942871 T--T
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80033953 1 -  96802777 T---
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18695949 1 -  18957592 T---
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 319081 1 +    993696 T---
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_170113                  344 1 +       818 T---
i Diceros_bicornis.DicBicMic_scaffold_170113            C 0 C 0
s Echinops_telfairi.JH980316.1                           22991221 2 -  44670279 C--A
i Echinops_telfairi.JH980316.1                          C 0 I 3
s Eidolon_helvum.KE772537.1                                  9332 1 +     24177 G---
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1488647 1 +   1727528 T---
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7803382 2 +  15467074 T--A
i Elephantulus_edwardii.JH947210.1                      C 0 I 1
s Ellobius_lutescens.LOEQ01003611.1                        235856 2 -    369425 t--t
i Ellobius_lutescens.LOEQ01003611.1                     I 2 C 0
s Ellobius_talpinus.LOJH01090055.1                           2864 2 -      7838 C--T
i Ellobius_talpinus.LOJH01090055.1                      I 2 C 0
s Enhydra_lutris.KZ291749.1                              85868248 1 +  99434291 t---
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Equus_asinus.JREZ01000062.1                             5849811 1 -   7175178 T---
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13348314 1 +  41866177 T---
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                           9804 1 +     92910 T---
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erythrocebus_patas.Contig8                             48767232 2 -  48907691 T--T
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          312097 1 +    330699 T---
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             58526 1 +     89355 T---
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              1688 2 +     13586 T--T
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               1624 2 -      6809 T--T
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             8095 3 +     36558 TT-T
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             4412 2 +     60246 T--T
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 7900 2 +    109717 T--T
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               12274 2 +     16540 T--T
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                12551 2 +     27497 T--T
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           15007 2 +     26808 T--T
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                29741 2 +     46535 T--T
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              12464 2 -     29447 T--T
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129889485 1 - 159252932 T---
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129276559 1 - 158578461 T---
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 17694 1 +     52776 T---
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13889693 1 -  19261668 t---
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               152947 2 +    324696 T--T
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    178160 1 -    189561 T---
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                            9352 2 -     18683 A--T
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               1806 2 -     14630 T--T
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119648904 2 - 195582420 t--t
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   73904 2 +    118900 A--T
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                         2235 2 +      3980 T--T
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             24715 2 +     26611 T--T
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             2169 2 +     56096 T--T
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        25442 2 -     42470 T--T
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        42039 2 -     54384 T--T
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              13735 1 +     53719 T---
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                24646 1 -     91191 T---
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2547804 1 +  31725842 t---
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               53217 2 +     73687 C--A
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              144220 1 +    277961 T---
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      275643 1 -    477199 T---
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              4797 1 -      9143 T---
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg649                                    98478 2 +    115816 T--T
i Hoolock_leuconedys.ctg649                                C 0 I 2
s Hyaena_hyaena.HyaHya_flattened_line_20729                 12804 1 -     67322 T---
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hylobates_abbotti.k141_493872                              1615 2 +      5897 T--T
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_282275                                828 2 +      1846 T--T
i Hylobates_agilis.k141_282275                          C 0 C 0
s Hylobates_klossii.k141_466549                              8073 2 +     11537 T--T
i Hylobates_klossii.k141_466549                         C 0 I 2
s Hylobates_muelleri.k141_1133650                            1050 2 -      2775 T--T
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             29652 2 -     60944 T--T
i Hylobates_pileatus_a.tarseq_592                         C 0 I 2
s Hystrix_cristata.HysCri_scaffold_50788                     2774 1 +     22540 T---
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7122567 2 +  13083262 C--C
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_3334527                                   8679 2 +      9207 T--T
i Indri_indri.k141_3334527                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               5880 1 +     17520 T---
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               20712 1 +     37189 T---
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          46530 2 -    147782 T--T
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   110827 1 -    115756 T---
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258403718 2 - 285822530 T--T
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        20612 2 +     39228 T--T
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            49988 2 +     63517 T--T
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        75208 2 +    116806 T--T
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     28249 2 -     33031 T--T
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3082494 1 -   3498232 T---
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                     9717 2 +     22452 T--T
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            133055 1 +   3060487 T---
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19244318 2 +  19376315 T--T
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loxodonta_africana.GL010040.1                          20587791 2 -  62548349 T--A
i Loxodonta_africana.GL010040.1                         C 0 I 2
s Lycaon_pictus.CM007556.1                               11083854 1 +  39895028 T---
i Lycaon_pictus.CM007556.1                              C 0 I 2
s Macaca_arctoides.k141_2201161                             16004 2 +     74745 T--T
i Macaca_arctoides.k141_2201161                         C 0 I 2
s Macaca_assamensis.Contig65                             12702510 2 +  12821369 T--T
i Macaca_assamensis.Contig65                            C 0 I 2
s Macaca_cyclopis.k119_1168412                               4603 1 +      6569 T---
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           42903 1 +     63263 T---
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_1068107                               11480 1 +     12679 T---
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                1053 1 +      3017 T---
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  42665 1 -     79256 T---
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196031585 1 + 196197964 t---
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11441689 1 +  11645122 t---
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   1615 1 -     46448 T---
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                1442 2 -      3617 C--T
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 11775 1 -     55006 T---
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43836814 1 +  43892939 T---
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                4037 2 -      5978 T--T
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               1617 1 -     27140 T---
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43433478 2 -  43563597 T--T
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4446304 2 -   4543643 T--T
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            143122 1 +    252755 T---
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             33186 1 +     58827 T---
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36870414 2 +  64221397 C--c
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_1828            225746 1 -    226874 T---
i Mellivora_capensis.MelCap_flattened_line_1828         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233                8225 2 +     15977 T--T
i Meriones_unguiculatus.MerUng_scaffold_52233           I 2 I 1
s Mesocricetus_auratus.KB708139.1                         1043120 2 -  26018355 G--G
i Mesocricetus_auratus.KB708139.1                       I 2 I 1
s Mesoplodon_bidens.MesBid_scaffold_183284                    751 1 +      2166 T---
i Mesoplodon_bidens.MesBid_scaffold_183284              C 0 C 0
s Microcebus_murinus.CM007691.1                          16506833 2 +  47401472 t--t
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  28167 2 -     48017 T--A
i Microgale_talazaci.MicTal_scaffold_34660              C 0 I 3
s Micronycteris_hirsuta.MicHir_scaffold_37978               19798 1 -     32043 T---
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22816003 2 -  98408828 t--t
i Microtus_ochrogaster.CM001673.1                       I 2 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8206519 1 +  10048721 T---
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            31200 1 +     45743 T---
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        32152 2 +     34273 T--T
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         7792 1 -    104932 T---
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     2247 2 +      8497 T--T
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 143478 1 +    154973 T---
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                158331 1 +    265003 T---
i Mormoops_blainvillei.MorMeg_scaffold_2952             I 213 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 1745 1 -      4346 T---
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  141425 1 -    168139 T---
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          16336 1 -    100666 T---
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70761869 3 +  92629107 t-tt
i Mus_caroli.LT608236.1                                 I 2 I 1
s Mus_musculus.chr16                                     75484993 3 +  98207768 t-tt
i Mus_musculus.chr16                                    I 2 I 1
s Mus_pahari.LT608305.1                                  67549309 3 +  89017189 t-tt
i Mus_pahari.LT608305.1                                 I 2 I 1
s Mus_spretus.CM004110.1                                 74324412 3 +  97876770 t-tt
i Mus_spretus.CM004110.1                                I 2 I 1
s Muscardinus_avellanarius.MusAve_scaffold_9643              7864 2 +     98495 A--T
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4420641 1 -  28371801 T---
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     86834 1 -    117718 T---
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               964663 1 +   8389877 T---
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5016340 1 +   6462685 T---
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3462249 1 -   3747815 T---
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         7446 1 +     66751 T---
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             2188 3 -      8794 TT-T
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nasalis_larvatus.k141_153429                               4517 2 +     48152 T--T
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4481393 1 -  14209539 T---
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3948087 1 -   4490290 T---
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  46450 1 +     94413 T---
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1223136                          10284 2 -     11253 T--T
i Nomascus_annamensis.k141_1223136                      C 0 I 2
s Nomascus_concolor.k141_468488                               927 2 -      1482 T--T
i Nomascus_concolor.k141_468488                         C 0 I 2
s Nomascus_gabriellae.k141_906566                             916 2 -      2544 T--T
i Nomascus_gabriellae.k141_906566                       C 0 I 2
s Nomascus_siki_b.tarseq_80                             21390 2 -  18771707 T--T
i Nomascus_siki_b.tarseq_80                         C 0 I 2
s Nomascus_siki_a.k141_844529                                   665 2 +      2124 T--T
i Nomascus_siki_a.k141_844529                             C 0 I 2
s Nyctereutes_procyonoides.CAJHUB010000786.1                26850 1 +   3668941 T---
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 I 2
s Ochotona_princeps.JH802095.1                            4992379 2 -  23139505 T--T
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3675566 1 +  10294119 T---
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             676051 1 -   3126709 T---
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1076870 1 +   1425656 T---
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         34032 1 +     78940 T---
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  121334 2 +    145789 T--T
i Ondatra_zibethicus.OndZib_scaffold_6821               I 2 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  33276 2 +     62360 T--T
i Onychomys_torridus.OnyTor_scaffold_12578              I 2 I 1
s Orcinus_orca.KB316965.1                                 7221771 1 -   7562323 T---
i Orcinus_orca.KB316965.1                               C 0 I 2
s Orycteropus_afer.OryAfe_flattened_line_13509              40026 2 -     66828 T--A
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 I 2
s Oryctolagus_cuniculus.CM000803.1                      141872366 2 + 163896628 t--t
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      304185 1 -    505867 T---
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Ovis_aries.CM001582.2                                 134074448 1 - 275406953 T---
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      75662 1 +    140051 T---
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.AJFE02000950.1                                 279 2 -      1008 t--t
i Pan_paniscus.AJFE02000950.1                           I 83 I 6
s Pan_troglodytes.KZ622857.1                               324131 2 +    772158 t--t
i Pan_troglodytes.KZ622857.1                            I 83 I 7
s Panthera_onca.PanOnc_flattened_line_1615                  30648 1 +    295523 T---
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3634252 1 +  18214204 T---
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5024029 1 -   6340057 T---
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1063306 1 -   1292953 T---
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188152263 3 - 188283584 t-tt
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            48475 2 +     76494 T--T
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47509659 3 +  47705337 TT-T
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 63642 2 -    104429 T--T
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  13426 3 -     29451 TT-T
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                33831 2 +     35859 T--T
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    111980 1 -    135482 T---
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4946449 2 -   8017169 t--t
i Peromyscus_maniculatus.KI615518.1                     I 2 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            118388 1 -    122454 T---
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           1518 2 -      3310 T--T
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       21424 2 -     82327 T--T
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           18175 2 +     19957 T--T
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26736184 2 +  26888534 t--t
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            93436 1 +    112873 T---
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             40030 2 -     61926 T--T
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        21459 2 +     78826 T--T
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              5410 2 -     15800 T--T
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                         8608 2 -     16101 T--T
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          1917 2 +      9673 T--T
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13470911 2 -  19735023 T--T
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                            9819 2 -     31692 T--T
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           2455 1 +     21690 T---
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       19211 2 +     44506 T--T
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        19429 2 +     67491 T--T
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                       9674 2 -     98129 T--T
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     19274 2 +    147771 T--T
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        19525 2 -     23762 T--T
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_2078842                         19473 2 -     19696 T--T
i Plecturocebus_dubius.k141_2078842                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         19347 2 +    152463 T--T
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      6104 2 +      8943 T--T
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                          9064 2 +    134592 T--T
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          19657 2 -     75465 T--T
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              183701 2 -    373494 t--t
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19803605 2 +  19899266 T--T
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               1754 2 -     15069 T--T
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              1888 2 +     14865 T--T
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                73081 2 +     78963 C--A
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6845091 2 +  12164890 t--t
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     13526 2 -     30946 t--t
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                          231 2 +     11805 T--T
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           39560 4 +     52369 TTTT
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         31949 4 -     44753 TTTT
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            13871 4 +     27322 TTTT
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       13515 2 -     53241 T--T
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         35787 2 -     48185 T--T
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           29293 2 +     77221 t--t
i Psammomys_obesus.NESX01026517.1                       I 2 I 1
s Pteronura_brasiliensis.PteBra_flattened_line_1343        242513 1 -    344369 T---
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13243125 1 -  17261082 G---
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             601079 1 -   3946241 G---
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131530845 1 - 161321710 T---
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             25879 2 +     56732 T--T
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6802369 2 +   6970761 T--T
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             1761 2 +     18040 T--T
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                12956 1 +     68503 T---
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13911235 2 +  90463843 t--t
i Rattus_norvegicus.chr11                               I 2 I 1
s Rhinolophus_sinicus.LVEH01000179.1                      1784726 1 +   2252614 t---
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           12316 2 -     14454 T--T
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206373642 2 - 206558726 t--t
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44851290 2 -  45163003 T--T
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                16428 1 +    109198 G---
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       4734 1 +     12214 T---
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15669082 2 -  43202129 T--T
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                         957 2 +     34089 T--T
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                               888 2 -     60842 T--T
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                               957 2 +     67014 T--T
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                               957 2 +     60816 T--T
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                  885 2 -     76454 T--T
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17337465 2 -  30362882 T--T
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         17066 2 -     62485 T--T
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   28483 1 -    114521 T---
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1527475                       24304 2 +     26421 T--T
i Semnopithecus_entellus.k141_1527475                   C 0 I 2
s Semnopithecus_hypoleucos.k141_761524                       4766 2 +     20762 T--T
i Semnopithecus_hypoleucos.k141_761524                  C 0 I 1
s Semnopithecus_johnii.k141_1351450                         38499 2 +     40653 T--T
i Semnopithecus_johnii.k141_1351450                     C 0 I 1
s Semnopithecus_priam.k141_198153                            9058 2 -     12194 T--T
i Semnopithecus_priam.k141_198153                       C 0 I 1
s Semnopithecus_schistaceus.k141_653647                     22477 3 -     27512 TT-T
i Semnopithecus_schistaceus.k141_653647                 C 0 I 1
s Semnopithecus_vetulus.k141_642050                         31498 2 -     33692 T--T
i Semnopithecus_vetulus.k141_642050                     C 0 I 1
s Sigmodon_hispidus.SigHis_scaffold_11332                   94523 2 -    120886 T--T
i Sigmodon_hispidus.SigHis_scaffold_11332               I 2 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            14729 1 +    739146 T---
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2236491 2 +   2842873 C--C
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             231511 1 -    276980 T---
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            24092 1 +     62062 T---
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189269026 1 + 218635234 T---
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        11416 2 -  13920577 T--T
i Symphalangus_syndactylus.tarseq_24                    I 115 I 137
s Tadarida_brasiliensis.TadBra_scaffold_145589               2931 1 -      6213 T---
i Tadarida_brasiliensis.TadBra_scaffold_145589          I 8 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               11866 3 +     45698 TT-T
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      803873 1 +   1148477 T---
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  54535 1 +     99546 T---
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               23219 2 +     42269 T--T
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               56533 2 +     65473 T--T
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194003798 2 - 194193292 t--t
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                   725 1 +      6782 ---T
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  133014 1 -    259118 T---
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        22876 2 +     38948 T--T
i Trachypithecus_auratus.k141_738098                    C 0 I 1
s Trachypithecus_crepusculus.k141_1588528                   16603 2 -     32910 T--T
i Trachypithecus_crepusculus.k141_1588528               C 0 I 1
s Trachypithecus_cristatus.k141_27198                       22501 2 +     24652 T--T
i Trachypithecus_cristatus.k141_27198                   C 0 I 1
s Trachypithecus_francoisi.k141_1178450                      1386 2 -      3559 T--T
i Trachypithecus_francoisi.k141_1178450                 C 0 I 1
s Trachypithecus_geei.k141_670367                           39325 2 -     54611 T--T
i Trachypithecus_geei.k141_670367                       C 0 I 1
s Trachypithecus_germaini.k141_809503                       15324 2 +     17312 T--T
i Trachypithecus_germaini.k141_809503                   C 0 I 1
s Trachypithecus_hatinhensis.k141_357672                    22694 2 -     25040 T--T
i Trachypithecus_hatinhensis.k141_357672                C 0 I 1
s Trachypithecus_laotum.k141_171445                          1360 2 +      3528 T--T
i Trachypithecus_laotum.k141_171445                     C 0 I 1
s Trachypithecus_leucocephalus.k141_283605                  47722 2 +     51589 T--T
i Trachypithecus_leucocephalus.k141_283605              C 0 I 1
s Trachypithecus_melamera.k141_238507                       10890 2 +     14732 T--T
i Trachypithecus_melamera.k141_238507                   C 0 I 1
s Trachypithecus_obscurus.k141_1115109                       1368 2 -     28054 T--T
i Trachypithecus_obscurus.k141_1115109                  C 0 I 1
s Trachypithecus_phayrei.ctg3                            44656163 2 -  44834318 T--T
i Trachypithecus_phayrei.ctg3                           C 0 I 1
s Trachypithecus_pileatus.k141_469329                        1173 2 +      3372 T--T
i Trachypithecus_pileatus.k141_469329                   C 0 I 1
s Tragulus_javanicus.TraJav_scaffold_14717                   2371 1 +     90398 T---
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16078463 2 +  31416278 T--A
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2788283 2 -   3938065 G--T
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                     844 2 +     13056 G--T
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69310489 1 -  96451834 T---
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 23688 1 -     25548 T---
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6511101 1 +  28682327 T---
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Vicugna_pacos.KN269600.1                                1521808 1 -   2331223 C---
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                134255 1 -    281493 T---
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       123578 2 -    134049 T--C
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        210779 1 -    227762 T---
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           3992 1 -      8775 T---
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Perognathus_longimembris.PerPac_flattened_line_22291      39705 3 -     45160 I
e Dipodomys_stephensi.DipSte_scaffold_44365                 23717 3 +     28912 I
e Dipodomys_ordii.KN672545.1                              3652163 3 +   4240102 I
e Chrysochloris_asiatica.ChrAsi_scaffold_141308              5625 53 -     12508 M
e Pteronotus_parnellii.KE867983.1                             999 0 -     27784 C
e Megaderma_lyra.MegLyr_scaffold_3562                       61508 0 -    234502 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16291 1 -    119109 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     12283 2 -     20485 I
e Jaculus_jaculus.JH725517.1                              8561873 2 +  11848649 I
e Allactaga_bullata.AllBul_scaffold_70162                    8911 2 -     22067 I
e Varecia_variegata.k141_775891                             21577 0 -     33872 C
e Varecia_rubra.k141_432109                                  2032 0 -     20643 C
e Perodicticus_potto.k141_713187                            21218 0 -     27972 C
e Perodicticus_ibeanus.k141_117958                           1921 0 -     23713 C
e Otolemur_garnettii.GL873528.1                          18005146 0 -  38779656 C
e Otolemur_crassicaudatus.k141_321880                       35705 0 +     38679 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65666061 0 +  89412551 C
e Nycticebus_coucang.k141_2051882                             537 0 +      6470 C
e Nycticebus_bengalensis.LG16                            65563692 0 -  95554990 C
e Nannospalax_galili.KL201303.1                            107449 0 +    362372 C
e Loris_tardigradus.ctg97                                 3775113 0 +   6799190 C
e Loris_lydekkerianus.k141_550999                            7362 0 +     84689 C
e Galagoides_demidoff.k141_1769638                           7066 0 +     27357 C
e Galago_senegalensis.k141_964197                           10017 0 -     43889 C
e Galago_moholi.ctg555                                     207637 0 -    847004 C
e Dolichotis_patagonum.DolPat_scaffold_14102                33375 0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             56104 16 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                14631 16 +     26546 I
e Cricetulus_griseus.LT883672.1                          53025429 0 +  72327488 C
e Cavia_tschudii.CavTsc_scaffold_488                       173989 0 +    436027 C
e Cavia_porcellus.DS562889.1                             15795798 0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15783848 16 -  24422027 I
e Arctocebus_calabarensis.k141_1161114                      14574 0 +     17483 C

a score=0.000000
s hg38.chr4_GL000008v2_random                                8415  6 +    209709 TT-T-T------T---T
s Acinonyx_jubatus.LLWD01000356.1                         2030506  5 +   3721120 T--T-C------T---T
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    108772  2 -    189883 -----T------T----
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 1 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10653827  5 +  23371972 T--T-C------T---T
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7090528  5 -  16596857 t--t-t------t---t
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allenopithecus_nigroviridis.k141_3103707                  59438  5 +     61638 T--T-T------T---T
i Allenopithecus_nigroviridis.k141_3103707              C 0 I 2
s Allochrocebus_lhoesti.k141_4825038                        51249  2 +     53391 ------------T---T
i Allochrocebus_lhoesti.k141_4825038                    I 3 I 2
s Allochrocebus_preussi.k141_1202907                         1973  2 +     72529 ------------T---T
i Allochrocebus_preussi.k141_1202907                    I 3 I 2
s Allochrocebus_solatus.k141_787528                          1549  2 +      3797 ------------T---T
i Allochrocebus_solatus.k141_787528                     I 3 I 2
s Alouatta_belzebul.k141_1818029                             6639  3 -     18050 T--T-T-----------
i Alouatta_belzebul.k141_1818029                        C 0 I 1
s Alouatta_caraya.k141_5460                                  7756  3 -     11521 T--T-T-----------
i Alouatta_caraya.k141_5460                             C 0 I 1
s Alouatta_discolor.k141_811576                              7314  3 -     21359 T--T-T-----------
i Alouatta_discolor.k141_811576                         C 0 I 1
s Alouatta_juara.k141_1856473                                5697  3 +      7227 T--T-T-----------
i Alouatta_juara.k141_1856473                           C 0 I 1
s Alouatta_macconnelli.k141_1331706                          6611  3 -     10438 T--T-T-----------
i Alouatta_macconnelli.k141_1331706                     C 0 I 1
s Alouatta_nigerrima.k141_2718643                            3266  3 +      7047 T--T-T-----------
i Alouatta_nigerrima.k141_2718643                       C 0 I 1
s Alouatta_palliata.k141_1316127                             6550  3 +     10410 T--T-T-----------
i Alouatta_palliata.k141_1316127                        C 0 I 1
s Alouatta_puruensis.k141_1374428                             353  3 -     25526 T--T-T-----------
i Alouatta_puruensis.k141_1374428                       C 0 I 1
s Alouatta_seniculus.k141_990213                             3271  3 +      6429 T--T-T-----------
i Alouatta_seniculus.k141_990213                        C 0 I 1
s Ammotragus_lervia.NIVO01013474.1                        3517278  5 +   4113121 T--T-C------T---G
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      387463  5 -    631301 T--T-C------T---T
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            27911  5 +     33004 T--T-C------T---G
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                      450  5 +      5067 ------------ATATC
i Aplodontia_rufa.AprRuf_scaffold_156013                I 2 C 0
s Aotus_azarae.k141_3170768                                 58945  3 +     78111 T--T-T-----------
i Aotus_azarae.k141_3170768                             C 0 I 1
s Aotus_griseimembra.k141_3275623                            1876  3 +     22701 T--T-T-----------
i Aotus_griseimembra.k141_3275623                       C 0 I 1
s Aotus_nancymaae.KZ196176.1                              5745836  3 +   9889416 T--T-T-----------
i Aotus_nancymaae.KZ196176.1                            C 0 I 1
s Aotus_trivirgatus.k141_1740727                             2428  3 -    104377 T--T-T-----------
i Aotus_trivirgatus.k141_1740727                        C 0 I 1
s Aotus_vociferans.k141_718647                               2428  3 +     23246 T--T-T-----------
i Aotus_vociferans.k141_718647                          C 0 I 1
s Arctocebus_calabarensis.k141_1161114                      14574  3 +     17483 -----T------G---T
i Arctocebus_calabarensis.k141_1161114                  C 0 I 2
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 5562  5 -     29036 T--T-C------T---T
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9535689  3 +  39197703 T--T-T-----------
i Ateles_geoffroyi_b.tarseq_2582                           C 0 I 1
s Ateles_belzebuth.k141_1348307                             56977  3 +     85812 T--T-T-----------
i Ateles_belzebuth.k141_1348307                         C 0 I 1
s Ateles_chamek.k141_1072810                                 7974  3 +     89302 T--T-T-----------
i Ateles_chamek.k141_1072810                            C 0 I 1
s Ateles_geoffroyi_a.k141_1300742                             12483  3 -     58268 T--T-T-----------
i Ateles_geoffroyi_a.k141_1300742                         C 0 I 1
s Ateles_marginatus.k141_899112                             60471  3 +    119057 T--T-T-----------
i Ateles_marginatus.k141_899112                         C 0 I 1
s Ateles_paniscus.k141_1631200                               2421  3 -     25888 T--T-T-----------
i Ateles_paniscus.k141_1631200                          C 0 I 1
s Avahi_laniger.k141_2840928                                 3283  5 -     16375 G--T-T------T---T
i Avahi_laniger.k141_2840928                            C 0 I 2
s Avahi_peyrierasi.k141_767228                               9255  5 -      9688 G--T-T------T---T
i Avahi_peyrierasi.k141_767228                          C 0 I 2
s Balaenoptera_acutorostrata.KI537095.1                  26377214  5 +  51448160 T--T-C------T---T
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        2445  5 -     13118 T--T-C------T---T
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   40378  5 -     72089 T--T-C------T---G
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6556525  5 +   6870073 T--T-C------T---G
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138136756  5 - 161108492 T--T-C------T---G
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     569134  5 -    998990 T--T-C------T---G
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136292489  5 - 158972876 T--T-C------T---G
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1228110  5 -   1914593 T--T-C------T---G
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               110319  3 -    171031 T--T-T-----------
i Cacajao_ayresi.k141_724503                            C 0 I 1
s Cacajao_calvus.k141_96166                                  9345  3 +    125063 T--T-T-----------
i Cacajao_calvus.k141_96166                             C 0 I 1
s Cacajao_hosomi.k141_303789                                11393  3 -    216513 T--T-T-----------
i Cacajao_hosomi.k141_303789                            C 0 I 1
s Cacajao_melanocephalus.k141_1160263                        3932  3 -    134917 T--T-T-----------
i Cacajao_melanocephalus.k141_1160263                   C 0 I 1
s Camelus_bactrianus.KN276303.1                           3216247  5 -   8989139 T--T-C------T---T
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           394431  5 -  15254737 T--T-C------T---T
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2970168  5 +   6889770 T--T-C------T---T
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11515211  5 +  39901454 T--T-C------T---T
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   10228  5 +     87036 T--T-C------T---T
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11261870  5 -  35597290 T--T-C------T---T
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11084399  5 +  39895921 T--T-C------T---T
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16451433  5 -  44759192 T--T-C------T---T
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21322385  5 + 157394656 T--T-C------T---G
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135703612  5 - 157403528 T--T-C------T---G
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_647363                  1144  2 +      1887 ---T-G-----------
i Capromys_pilorides.CapPil_scaffold_647363             C 0 I 5
s Carlito_syrichta.NW_007248099.1                          305731  3 +    345090 -----C------T---T
i Carlito_syrichta.NW_007248099.1                       C 0 I 2
s Carollia_perspicillata.CarPer_scaffold_4436               56640  5 +     67245 T--T-C------T---T
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   27145  5 +     33760 T--T-T------T---T
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   155954  5 -    276539 T--T-C------T---T
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18887158  3 -  29618158 T--T-T-----------
i Cebus_albifrons.Contig22                              C 0 I 1
s Cebus_olivaceus.k141_93739                                 4704  3 -     26817 T--T-T-----------
i Cebus_olivaceus.k141_93739                            C 0 I 1
s Cebus_unicolor.k141_239009                                 8944  3 +     25043 T--T-T-----------
i Cebus_unicolor.k141_239009                            C 0 I 1
s Cephalopachus_bancanus.k141_702587                         4780  3 +     21754 -----C------T---T
i Cephalopachus_bancanus.k141_702587                    C 0 I 2
s Ceratotherium_simum.JH767818.1                          4360425  5 +   7569818 T--T-C------T---T
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_520758          427  5 -       446 T--T-C------T---T
i Ceratotherium_simum_cottoni.CerCot_scaffold_520758    C 0 N 0
s Cercocebus_atys.KQ010443.1                              6551234  6 +   6739814 t--ttt------t---t
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      52711  6 -     54931 T--TTT------T---T
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         17695  6 -     19697 T--TTT------T---T
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         55226  6 -    107033 T--TTT------T---T
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        1668  5 -      3853 T--T-T------T---T
i Cercopithecus_ascanius.k141_3371259                   C 0 I 2
s Cercopithecus_cephus.k141_598190                          25600  5 +     30494 T--T-T------T---T
i Cercopithecus_cephus.k141_598190                      C 0 I 2
s Cercopithecus_diana.k141_1490386                           1623  6 -      4022 T--T-TT-----T---T
i Cercopithecus_diana.k141_1490386                      C 0 I 2
s Cercopithecus_hamlyni.k141_381099                          1516  6 -      3505 T--T-TT-----T---T
i Cercopithecus_hamlyni.k141_381099                     C 0 I 2
s Cercopithecus_lowei.k141_623764                           20321  5 +     35983 T--T-T------T---T
i Cercopithecus_lowei.k141_623764                       C 0 I 2
s Cercopithecus_albogularis.ctg51                              11986843  5 +  12117833 T--T-T------T---T
i Cercopithecus_albogularis.ctg51                             C 0 I 2
s Cercopithecus_mona.ctg12                               46473596  5 +  46592721 T--T-T------T---T
i Cercopithecus_mona.ctg12                              C 0 I 2
s Cercopithecus_neglectus.k141_1474992                      31423  5 +     33420 T--T-T------T---T
i Cercopithecus_neglectus.k141_1474992                  C 0 I 2
s Cercopithecus_nictitans.k141_675209                        1459  5 -      3443 T--T-T------T---T
i Cercopithecus_nictitans.k141_675209                   C 0 I 2
s Cercopithecus_petaurista.k141_2037881                      2450  5 -      4669 T--T-T------T---T
i Cercopithecus_petaurista.k141_2037881                 C 0 I 2
s Cercopithecus_pogonias.k141_1977419                        2253  2 -      4411 ------------T---T
i Cercopithecus_pogonias.k141_1977419                   I 2 I 2
s Cercopithecus_roloway.k141_3372345                         1774  6 -      4205 T--T-TT-----T---T
i Cercopithecus_roloway.k141_3372345                    C 0 I 2
s Chaetophractus_vellerosus.ChaVel_scaffold_1070855             1  5 -      1715 T--T-T------T---T
i Chaetophractus_vellerosus.ChaVel_scaffold_1070855     C 0 C 0
s Cheirogaleus_major.k141_1157592                           55619  5 -     68416 T--T-T------T---T
i Cheirogaleus_major.k141_1157592                       C 0 I 3
s Cheirogaleus_medius.k141_133808                            4668  5 +     13308 T--T-T------T---T
i Cheirogaleus_medius.k141_133808                       C 0 I 3
s Cheracebus_lucifer.k141_619653                             1957  3 -     18223 T--T-T-----------
i Cheracebus_lucifer.k141_619653                        C 0 I 1
s Cheracebus_lugens.k141_203936                             18980  3 +     25473 T--T-T-----------
i Cheracebus_lugens.k141_203936                         C 0 I 1
s Cheracebus_regulus.k141_2128895                           38019  3 +     57117 T--T-T-----------
i Cheracebus_regulus.k141_2128895                       C 0 I 1
s Cheracebus_torquatus.k141_315545                          42694  3 +     54541 T--T-T-----------
i Cheracebus_torquatus.k141_315545                      C 0 I 1
s Chinchilla_lanigera.JH721867.1                         15958108  2 +  43084221 ---T-G-----------
i Chinchilla_lanigera.JH721867.1                        C 0 I 403
s Chiropotes_israelita.k141_1189915                         67540  3 +    196370 T--T-T-----------
i Chiropotes_israelita.k141_1189915                     C 0 I 1
s Chiropotes_sagulatus.k141_773804                          11715  3 +     40510 T--T-T-----------
i Chiropotes_sagulatus.k141_773804                      C 0 I 1
s Chlorocebus_aethiops.ctg22                             15135055  6 -  15256731 T--TTT------T---T
i Chlorocebus_aethiops.ctg22                            C 0 I 2
s Chlorocebus_pygerythrus.k141_1486215                      30101  6 -     53260 T--TTT------T---T
i Chlorocebus_pygerythrus.k141_1486215                  C 0 I 2
s Chlorocebus_sabaeus.CM001963.2                        101140549  7 + 101219884 t--ttt-----tt---t
i Chlorocebus_sabaeus.CM001963.2                        C 0 I 2
s Choloepus_didactylus.ChoDid_scaffold_36182                13619  5 -     21363 T--T-T------T---T
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           758925  5 +    964067 T--T-T------T---T
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10879131  5 +  10971483 t--t-t------t---t
i Colobus_angolensis.KN985967.1                         C 0 I 2
s Colobus_guereza.LG08                                  147660289  5 + 156195979 T--T-T------T---T
i Colobus_guereza.LG08                                  C 0 I 2
s Colobus_polykomos.k141_1406057                            12275  5 +     23629 T--T-T------T---T
i Colobus_polykomos.k141_1406057                        C 0 I 2
s Condylura_cristata.JH655880.1                          60609888  5 +  78930452 t--t-c------t---t
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         36346  5 -     40477 T--T-C------T---T
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 274213  5 -    399297 T--T-T------T---T
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             15872  5 -     19186 T--T-G------T---C
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            48533  5 -     70449 T--T-C------T---T
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  204946  5 -    956709 T--T-T------T---T
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 27212  2 -     67205 ---T-G-----------
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 I 5
s Dasypus_novemcinctus.JH568778.1                          178806  5 -   6883506 t--t-t------t---t
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16841493  3 +  31942871 -----T------C---T
i Daubentonia_madagascariensis.ctg11                    C 0 I 2
s Delphinapterus_leucas.KZ290064.1                       80033954  5 -  96802777 T--T-C------T---T
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18695950  5 -  18957592 T--T-C------T---T
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 319082  5 +    993696 T--T-C------T---T
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_170113                  345  5 +       818 T--T-C------T---T
i Diceros_bicornis.DicBicMic_scaffold_170113            C 0 C 0
s Echinops_telfairi.JH980316.1                           22991226  2 -  44670279 ------------T---T
i Echinops_telfairi.JH980316.1                          I 3 C 0
s Eidolon_helvum.KE772537.1                                  9333  5 +     24177 T--T-C------T---T
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1488648  5 +   1727528 T--T-C------C---A
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7803385  2 +  15467074 ------------T---T
i Elephantulus_edwardii.JH947210.1                      I 1 C 0
s Ellobius_lutescens.LOEQ01003611.1                        235858  4 -    369425 ---t-t------t---c
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           2866  5 -      7838 T--T-T------T---C
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85868249  5 +  99434291 T--T-C------T---T
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Equus_asinus.JREZ01000062.1                             5849812  5 -   7175178 T--T-C------T---T
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13348315  5 +  41866177 T--T-C------T---T
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                           9805  5 +     92910 T--T-C------T---T
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erythrocebus_patas.Contig8                             48767234  6 -  48907691 T--TTT------T---T
i Erythrocebus_patas.Contig8                            C 0 I 2
s Eschrichtius_robustus.EscRob_flattened_line_685          312098  5 +    330699 T--T-C------T---T
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             58527  5 +     89355 T--T-C------T---T
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              1690  5 +     13586 T-TT-T------T----
i Eulemur_albifrons.k141_715837                         C 0 I 2
s Eulemur_collaris.k141_311830                               1626  5 -      6809 T-TT-T------T----
i Eulemur_collaris.k141_311830                          C 0 I 2
s Eulemur_coronatus.k141_3240342                             8098  5 +     36558 T-TT-T------T----
i Eulemur_coronatus.k141_3240342                        C 0 I 2
s Eulemur_flavifrons.k141_903901                             4414  5 +     60246 T-TT-T------T----
i Eulemur_flavifrons.k141_903901                        C 0 I 2
s Eulemur_fulvus.k141_653297                                 7902  5 +    109717 T-TT-T------T----
i Eulemur_fulvus.k141_653297                            C 0 I 2
s Eulemur_macaco.k141_1341545                               12276  5 +     16540 T-TT-T------T----
i Eulemur_macaco.k141_1341545                           C 0 I 2
s Eulemur_mongoz.k141_825972                                12553  4 +     27497 T--T-T------T----
i Eulemur_mongoz.k141_825972                            C 0 I 3
s Eulemur_rubriventer.k141_411740                           15009 10 +     26808 T--T-TTTTTTTT----
i Eulemur_rubriventer.k141_411740                       C 0 I 2
s Eulemur_rufus.k141_1620292                                29743  4 +     46535 T--T-T------T----
i Eulemur_rufus.k141_1620292                            C 0 I 2
s Eulemur_sanfordi.k141_186399                              12466  4 -     29447 T--T-T------T----
i Eulemur_sanfordi.k141_186399                          C 0 I 2
s Felis_catus.CM001386.2                                129889486  5 - 159252932 T--T-C------T---T
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129276560  5 - 158578461 T--T-C------T---T
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 17695  5 +     52776 T--T-C------T---T
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13889694  2 -  19261668 ---t-t-----------
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     207637  3 -    847004 -----T------T---T
i Galago_moholi.ctg555                                  C 0 I 2
s Galago_senegalensis.k141_964197                           10017  3 -     43889 -----T------T---T
i Galago_senegalensis.k141_964197                       C 0 I 2
s Galagoides_demidoff.k141_1769638                           7066  3 +     27357 -----T------T---T
i Galagoides_demidoff.k141_1769638                      C 0 I 2
s Galeopterus_variegatus.GalVar_scaffold_354               152949  5 +    324696 T--T-T------T---T
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 I 1
s Giraffa_tippelskirchi.LVKQ01S012154.1                    178161  5 -    189561 T--T-C------T---G
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                            9354  5 -     18683 T--T-G------C---T
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               1808  6 -     14630 TT-T-T------T---T
i Gorilla_beringei.k141_111300                          C 0 I 2
s Gorilla_gorilla.LT578340.1                            119648906  6 - 195582420 tt-t-t------t---t
i Gorilla_gorilla.LT578340.1                            C 0 I 2
s Graphiurus_murinus.GraMur_scaffold_4493                   73906  5 +    118900 T--T-G------T---T
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                         2237  4 +      3980 T--T-T------T----
i Hapalemur_alaotrensis.k141_1198205                    C 0 I 2
s Hapalemur_gilberti.k141_97962                             24717  4 +     26611 T--T-T------T----
i Hapalemur_gilberti.k141_97962                         C 0 I 2
s Hapalemur_griseus.k141_1387522                             2171  4 +     56096 T--T-T------T----
i Hapalemur_griseus.k141_1387522                        C 0 I 2
s Hapalemur_meridionalis.k141_186231                        25444  4 -     42470 T--T-T------T----
i Hapalemur_meridionalis.k141_186231                    C 0 I 2
s Hapalemur_occidentalis.k141_797938                        42041  4 -     54384 T--T-T------T----
i Hapalemur_occidentalis.k141_797938                    C 0 I 2
s Helogale_parvula.HelPar_flattened_line_22962              13736  5 +     53719 T--T-C------T---T
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                24647  5 -     91191 T--T-C------T---G
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2547805  2 +  31725842 ---t-t-----------
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               53219  5 +     73687 C--A-C------T---T
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              144221  5 +    277961 T--T-C------T---T
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      275644  5 -    477199 T--T-C------T---T
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              4798  5 -      9143 T--T-C------T---T
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg649                                    98482  2 +    115816 ------------T---T
i Hoolock_leuconedys.ctg649                                I 2 I 2
s Hyaena_hyaena.HyaHya_flattened_line_20729                 12805  5 -     67322 T--T-C------T---T
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hylobates_klossii.k141_466549                              8077  2 +     11537 ------------T---T
i Hylobates_klossii.k141_466549                         I 2 I 133
s Hylobates_pileatus_a.tarseq_592                             29656  2 -     60944 ------------T---T
i Hylobates_pileatus_a.tarseq_592                         I 2 I 2
s Hylobates_abbotti.k141_493872                              1617  3 +      5897 T-TT-------------
i Hylobates_abbotti.k141_493872                         C 0 I 3
s Hylobates_agilis.k141_282275                                830  3 +      1846 T-TT-------------
i Hylobates_agilis.k141_282275                          C 0 I 4
s Hylobates_muelleri.k141_1133650                            1052  3 -      2775 T-TT-------------
i Hylobates_muelleri.k141_1133650                       C 0 I 3
s Hystrix_cristata.HysCri_scaffold_50788                     2775  4 +     22540 ---T-T------T---C
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7122569  8 +  13083262 A--C-G------TTTTA
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_3334527                                   8681  5 +      9207 T--T-T------T---T
i Indri_indri.k141_3334527                              C 0 I 2
s Inia_geoffrensis.IniGeo_flattened_line_66725               5881  5 +     17520 T--T-C------T---T
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               20713  5 +     37189 T--T-C------T---T
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          46532  3 -    147782 T--T-T-----------
i Lagothrix_lagothricha.k141_12968                      C 0 I 1
s Lasiurus_borealis.LasBor_scaffold_5102                   110828  5 -    115756 T--T-C------T---T
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258403720  4 - 285822530 T--T-T------T----
i Lemur_catta.scaffold_1                                C 0 I 2
s Lepilemur_ankaranensis.k141_884009                        20614  6 +     39228 T-TT-T------T---T
i Lepilemur_ankaranensis.k141_884009                    C 0 I 4
s Lepilemur_dorsalis.k141_134267                            49990  6 +     63517 T-TT-T------T---T
i Lepilemur_dorsalis.k141_134267                        C 0 I 2
s Lepilemur_ruficaudatus.k141_617879                        75210  8 +    116806 T-TT-TTT----T---T
i Lepilemur_ruficaudatus.k141_617879                    C 0 I 2
s Lepilemur_septentrionalis.k141_578524                     28251  6 -     33031 T-TT-T------T---T
i Lepilemur_septentrionalis.k141_578524                 C 0 I 4
s Leptonychotes_weddellii.KB714749.1                      3082495  5 -   3498232 T--T-C------T---T
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                     9719  5 +     22452 C--T-T------T---T
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            133056  5 +   3060487 T--T-C------T---T
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19244320  5 +  19376315 T--T-T------T---T
i Lophocebus_aterrimus.ctg55                            C 0 I 2
s Loris_lydekkerianus.k141_550999                            7362  3 +     84689 -----T------T---T
i Loris_lydekkerianus.k141_550999                       C 0 I 2
s Loris_tardigradus.ctg97                                 3775113  3 +   6799190 -----T------T---T
i Loris_tardigradus.ctg97                               C 0 I 2
s Loxodonta_africana.GL010040.1                          20587795  3 -  62548349 -----T------T---T
i Loxodonta_africana.GL010040.1                         I 2 C 0
s Lycaon_pictus.CM007556.1                               11083857  3 +  39895028 -----C------T---T
i Lycaon_pictus.CM007556.1                              I 2 C 0
s Macaca_arctoides.k141_2201161                             16008  2 +     74745 ------------T---T
i Macaca_arctoides.k141_2201161                         I 2 I 2
s Macaca_assamensis.Contig65                             12702514  2 +  12821369 ------------T---T
i Macaca_assamensis.Contig65                            I 2 I 2
s Macaca_cyclopis.k119_1168412                               4604  8 +      6569 T--T-TTT---GT---T
i Macaca_cyclopis.k119_1168412                          C 0 I 2
s Macaca_fascicularis.k141_155037                           42904  5 +     63263 T--T-T------T---T
i Macaca_fascicularis.k141_155037                       C 0 I 6
s Macaca_fuscata.k119_1068107                               11481  6 +     12679 T--T-TT-----T---G
i Macaca_fuscata.k119_1068107                           C 0 I 4
s Macaca_leonina.k141_3421209                                1054  5 +      3017 T--T-T------T---T
i Macaca_leonina.k141_3421209                           C 0 I 2
s Macaca_maura.k141_251854                                  42666  5 -     79256 T--T-T------T---T
i Macaca_maura.k141_251854                              C 0 I 2
s Macaca_mulatta.NC_041755.1                            196031586  6 + 196197964 t--t-t-----tt---t
i Macaca_mulatta.NC_041755.1                            C 0 I 2
s Macaca_nemestrina.KQ004885.1                           11441690  5 +  11645122 t--t-t------t---t
i Macaca_nemestrina.KQ004885.1                          C 0 I 2
s Macaca_nigra.k141_282495                                   1616  5 -     46448 T--T-T------T---T
i Macaca_nigra.k141_282495                              C 0 I 2
s Macaca_radiata.k141_1580474                                1444  5 -      3617 T--T-T------T---T
i Macaca_radiata.k141_1580474                           C 0 I 4
s Macaca_siberu.k141_741907                                 11776  5 -     55006 T--T-T------T---T
i Macaca_siberu.k141_741907                             C 0 I 2
s Macaca_silenus.Contig12                                43836815  5 +  43892939 T--T-T------T---T
i Macaca_silenus.Contig12                               C 0 I 2
s Macaca_thibetana.k99_116940                                4039  5 -      5978 T--T-T------T---T
i Macaca_thibetana.k99_116940                           C 0 I 2
s Macaca_tonkeana.k141_2870633                               1618  5 -     27140 T--T-T------T---T
i Macaca_tonkeana.k141_2870633                          C 0 I 2
s Mandrillus_leucophaeus.scaffold125                     43433480  6 -  43563597 T--TTT------T---T
i Mandrillus_leucophaeus.scaffold125                    C 0 I 2
s Mandrillus_sphinx.Contig144                             4446306  6 -   4543643 T--TTT------T---T
i Mandrillus_sphinx.Contig144                           C 0 I 2
s Manis_javanica.JSZB01003966.1                            143123  5 +    252755 T--T-C------T---T
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             33187  5 +     58827 T--T-C------T---T
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36870416  8 +  64221397 a--t-g------tttta
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_1828            225747  5 -    226874 T--T-C------T---T
i Mellivora_capensis.MelCap_flattened_line_1828         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233                8228  2 +     15977 -----T------T----
i Meriones_unguiculatus.MerUng_scaffold_52233           I 1 C 0
s Mesocricetus_auratus.KB708139.1                         1043123  3 -  26018355 -----T------T---T
i Mesocricetus_auratus.KB708139.1                       I 1 C 0
s Mesoplodon_bidens.MesBid_scaffold_183284                    752  5 +      2166 T--T-C------T---T
i Mesoplodon_bidens.MesBid_scaffold_183284              C 0 C 0
s Microcebus_murinus.CM007691.1                          16506835  6 +  47401472 t-tt-t------t---t
i Microcebus_murinus.CM007691.1                         C 0 I 2
s Microgale_talazaci.MicTal_scaffold_34660                  28172  2 -     48017 ------------T---T
i Microgale_talazaci.MicTal_scaffold_34660              I 3 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               19799  5 -     32043 T--T-C------T---T
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22816005  5 -  98408828 t--t-t------t---c
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8206520  5 +  10048721 T--T-C------T---T
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            31201  5 +     45743 T--T-C------T---T
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        32154  5 +     34273 T--T-T------T---T
i Miopithecus_ogouensis.k141_2666161                    C 0 I 2
s Mirounga_angustirostris.MirAng_flattened_line_8852         7793  5 -    104932 T--T-C------T---T
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     2249  5 +      8497 T--T-T------T---T
i Mirza_zaza.k141_226143                                C 0 I 2
s Monodon_monoceros.MonMon_M_scaffold_5598                 143479  5 +    154973 T--T-C------T---T
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                158332  5 +    265003 T--T-C------T---T
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 1746  5 -      4346 T--T-C------T---G
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  141426  5 -    168139 T--T-C------T---T
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          16337  5 -    100666 T--C-C------T---T
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70761873  3 +  92629107 -----t------t---t
i Mus_caroli.LT608236.1                                 I 1 C 0
s Mus_musculus.chr16                                     75484997  3 +  98207768 -----t------t---t
i Mus_musculus.chr16                                    I 1 C 0
s Mus_pahari.LT608305.1                                  67549313  3 +  89017189 -----t------t---a
i Mus_pahari.LT608305.1                                 I 1 C 0
s Mus_spretus.CM004110.1                                 74324416  3 +  97876770 -----t------t---t
i Mus_spretus.CM004110.1                                I 1 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              7866  5 +     98495 T--T-G------T---T
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4420642  5 -  28371801 T--T-C------T---T
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     86835  2 -    117718 ---T-G-----------
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 I 5
s Myotis_brandtii.KE161952.1                               964664  5 +   8389877 T--T-C------T---T
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5016341  5 +   6462685 T--T-C------T---T
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3462250  5 -   3747815 T--T-C------T---T
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         7447  5 +     66751 T--T-C------T---T
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             2191  5 -      8794 T--T-T------T---T
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 I 1
s Nasalis_larvatus.k141_153429                               4519  5 +     48152 T--T-T------T---T
i Nasalis_larvatus.k141_153429                          C 0 I 2
s Neomonachus_schauinslandi.NINY01007774.1                4481394  5 -  14209539 T--T-C------T---T
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3948088  5 -   4490290 T--T-C------T---T
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  46451  5 +     94413 A--T-C------T---T
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1223136                          10288  2 -     11253 ------------T---T
i Nomascus_annamensis.k141_1223136                      I 2 I 2
s Nomascus_concolor.k141_468488                               931  2 -      1482 ------------T---T
i Nomascus_concolor.k141_468488                         I 2 I 2
s Nomascus_gabriellae.k141_906566                             920  2 -      2544 ------------T---T
i Nomascus_gabriellae.k141_906566                       I 2 I 2
s Nomascus_siki_b.tarseq_80                             21394  2 -  18771707 ------------T---T
i Nomascus_siki_b.tarseq_80                         I 2 I 2
s Nomascus_siki_a.k141_844529                                   669  2 +      2124 ------------T---T
i Nomascus_siki_a.k141_844529                             I 2 I 2
s Nyctereutes_procyonoides.CAJHUB010000786.1                26853  3 +   3668941 -----C------T---T
i Nyctereutes_procyonoides.CAJHUB010000786.1            I 2 C 0
s Nycticebus_bengalensis.LG16                            65563692  3 -  95554990 -----T------T---T
i Nycticebus_bengalensis.LG16                           C 0 I 2
s Nycticebus_coucang.k141_2051882                             537  3 +      6470 -----T------T---T
i Nycticebus_coucang.k141_2051882                       C 0 I 2
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65666061  3 +  89412551 -----T------T---T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 I 2
s Ochotona_princeps.JH802095.1                            4992381  5 -  23139505 C--T-A------T---T
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3675567  2 +  10294119 ---t-g-----------
i Octodon_degus.JH651621.1                              C 0 I 5
s Odobenus_rosmarus.KB229369.1                             676052  5 -   3126709 T--T-C------T---T
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1076871  5 +   1425656 T--T-C------T---G
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         34033  5 +     78940 T--T-C------T---G
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  121336  5 +    145789 T--T-T------T---C
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  33279  3 +     62360 -----T------T---T
i Onychomys_torridus.OnyTor_scaffold_12578              I 1 C 0
s Orcinus_orca.KB316965.1                                 7221774  3 -   7562323 -----C------T---T
i Orcinus_orca.KB316965.1                               I 2 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              40030  2 -     66828 ------------T---T
i Orycteropus_afer.OryAfe_flattened_line_13509          I 2 C 0
s Oryctolagus_cuniculus.CM000803.1                      141872368  5 + 163896628 c--t-t------t---t
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      304186  5 -    505867 T--T-C------T---T
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       35705  3 +     38679 -----T------T---T
i Otolemur_crassicaudatus.k141_321880                   C 0 I 2
s Otolemur_garnettii.GL873528.1                          18005146  3 -  38779656 -----T------T---T
i Otolemur_garnettii.GL873528.1                         C 0 I 2
s Ovis_aries.CM001582.2                                 134074449  5 - 275406953 T--T-C------T---G
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      75663  5 +    140051 T--T-C------T---G
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127571149  6 - 205426864 tt-t-t------t---t
i Pan_paniscus.CM003386.1                               I 1 I 22
s Pan_troglodytes.CM009241.2                            120148296  6 - 196562556 tt-t-t------t---t
i Pan_troglodytes.CM009241.2                            I 1 I 22
s Panthera_onca.PanOnc_flattened_line_1615                  30649  5 +    295523 T--T-C------T---T
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3634253  5 +  18214204 T--T-C------T---T
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5024030  5 -   6340057 T--T-C------T---T
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1063307  5 -   1292953 T--T-C------T---G
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188152266  3 - 188283584 t--t-t-----------
i Papio_anubis.CM001492.2                               C 0 I 3
s Papio_cynocephalus.k141_386926                            48477  5 +     76494 T--T-T------T---T
i Papio_cynocephalus.k141_386926                        C 0 I 2
s Papio_hamadryas.Contig15                               47509662  5 +  47705337 T--T-T------T---T
i Papio_hamadryas.Contig15                              C 0 I 2
s Papio_kindae.k141_5458022                                 63644  5 -    104429 T--T-T------T---T
i Papio_kindae.k141_5458022                             C 0 I 2
s Papio_papio.k141_3561084                                  13429  6 -     29451 T--T-T------TT--T
i Papio_papio.k141_3561084                              C 0 I 2
s Papio_ursinus.k141_3762866                                33833  5 +     35859 T--T-T------T---T
i Papio_ursinus.k141_3762866                            C 0 I 2
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    111981  5 -    135482 T--G-T------T---C
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4946451  6 -   8017169 t--ttt------t---t
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            118389  5 -    122454 T--T-C------T---T
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           1520  5 -      3310 T--T-T------T---T
i Piliocolobus_badius.k141_1497351                      C 0 I 2
s Piliocolobus_gordonorum.k141_902470                       21426  5 -     82327 T--T-T------T---T
i Piliocolobus_gordonorum.k141_902470                   C 0 I 2
s Piliocolobus_kirkii.k141_557609                           18177  6 +     19957 T--TTT------T---T
i Piliocolobus_kirkii.k141_557609                       C 0 I 2
s Piliocolobus_tephrosceles.PDMG02000036.1               26736186  6 +  26888534 t--ttt------t---t
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 I 2
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            93437  5 +    112873 T--T-C------T---T
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             40032  3 -     61926 T--T-T-----------
i Pithecia_albicans.k141_991845                         C 0 I 1
s Pithecia_chrysocephala.k141_159118                        21461  3 +     78826 T--T-T-----------
i Pithecia_chrysocephala.k141_159118                    C 0 I 1
s Pithecia_hirsuta.k141_1152968                              5412  3 -     15800 T--T-T-----------
i Pithecia_hirsuta.k141_1152968                         C 0 I 1
s Pithecia_mittermeieri.k141_2119203                         8610  3 -     16101 T--T-T-----------
i Pithecia_mittermeieri.k141_2119203                    C 0 I 1
s Pithecia_pissinattii.k141_1102319                          1919  3 +      9673 T--T-T-----------
i Pithecia_pissinattii.k141_1102319                     C 0 I 1
s Pithecia_pithecia.tarseq_313                           13470913  3 -  19735023 T--T-T-----------
i Pithecia_pithecia.tarseq_313                          C 0 I 1
s Pithecia_vanzolinii.k141_831006                            9821  3 -     31692 T--T-T-----------
i Pithecia_vanzolinii.k141_831006                       C 0 I 1
s Platanista_gangetica.PlaMin_flattened_line_72990           2456  5 +     21690 T--T-C------T---T
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       19213  3 +     44506 T--T-T-----------
i Plecturocebus_bernhardi.k141_959214                   C 0 I 1
s Plecturocebus_brunneus.k141_498086                        19431  3 +     67491 T--T-T-----------
i Plecturocebus_brunneus.k141_498086                    C 0 I 1
s Plecturocebus_caligatus.k141_2539816                       9676  3 -     98129 T--T-T-----------
i Plecturocebus_caligatus.k141_2539816                  C 0 I 1
s Plecturocebus_cinerascens.k141_744510                     19276  3 +    147771 T--T-T-----------
i Plecturocebus_cinerascens.k141_744510                 C 0 I 1
s Plecturocebus_cupreus.k141_1223294                        19527  3 -     23762 T--T-T-----------
i Plecturocebus_cupreus.k141_1223294                    C 0 I 1
s Plecturocebus_dubius.k141_2078842                         19475  3 -     19696 T--T-T-----------
i Plecturocebus_dubius.k141_2078842                     C 0 I 1
s Plecturocebus_grovesi.k141_242819                         19349  3 +    152463 T--T-T-----------
i Plecturocebus_grovesi.k141_242819                     C 0 I 1
s Plecturocebus_hoffmannsi.k141_1595076                      6106  3 +      8943 T--T-T-----------
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 I 1
s Plecturocebus_miltoni.k141_841561                          9066  3 +    134592 T--T-T-----------
i Plecturocebus_miltoni.k141_841561                     C 0 I 1
s Plecturocebus_moloch.k141_890597                          19659  3 -     75465 T--T-T-----------
i Plecturocebus_moloch.k141_890597                      C 0 I 1
s Pongo_abelii.NDHI03003816.1                              183703  5 -    373494 t--t-t------t---t
i Pongo_abelii.NDHI03003816.1                           C 0 I 2
s Pongo_pygmaeus.ctg62                                   19803607  5 +  19899266 T--T-T------T---T
i Pongo_pygmaeus.ctg62                                  C 0 I 2
s Presbytis_comata.k141_672698                               1756  6 -     15069 T-TT-T------T---T
i Presbytis_comata.k141_672698                          C 0 I 2
s Presbytis_mitrata.k141_860013                              1890  6 +     14865 T-TT-T------T---T
i Presbytis_mitrata.k141_860013                         C 0 I 2
s Procavia_capensis.ProCapCap_scaffold_15315                73083  5 +     78963 C--A-C------T---T
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6845093  5 +  12164890 t--t-t-----tt----
i Prolemur_simus.MPIZ01000048.1                         C 0 I 2
s Propithecus_coquerelli.NW_012147863.1                     13528  5 -     30946 t--t-t------t---t
i Propithecus_coquerelli.NW_012147863.1                 C 0 I 2
s Propithecus_coronatus.k141_1353159                          233  6 +     11805 T-TT-T------T---T
i Propithecus_coronatus.k141_1353159                    C 0 I 2
s Propithecus_diadema.k141_577245                           39564  5 +     52369 T--T-T------T---T
i Propithecus_diadema.k141_577245                       C 0 I 3
s Propithecus_edwardsi.k141_1317105                         31953  5 -     44753 T--T-T------T---T
i Propithecus_edwardsi.k141_1317105                     C 0 I 2
s Propithecus_perrieri.k141_7554                            13875  5 +     27322 T--T-T------T---T
i Propithecus_perrieri.k141_7554                        C 0 I 2
s Propithecus_tattersalli.k141_907138                       13517  5 -     53241 T--T-T------T---T
i Propithecus_tattersalli.k141_907138                   C 0 I 2
s Propithecus_verreauxi.k141_158021                         35789  5 -     48185 T--T-T------T---T
i Propithecus_verreauxi.k141_158021                     C 0 I 2
s Psammomys_obesus.NESX01026517.1                           29296  2 +     77221 -----t------t----
i Psammomys_obesus.NESX01026517.1                       I 1 C 0
s Pteronotus_parnellii.KE867983.1                             999  5 -     27784 T--T-C------T---T
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        242514  5 -    344369 T--T-C------T---T
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13243126  5 -  17261082 A--T-C------T---T
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             601080  5 -   3946241 A--T-C------T---T
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131530846  5 - 161321710 T--T-C------T---T
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             25881  5 +     56732 T--T-T------T---T
i Pygathrix_cinerea.k141_374971                         C 0 I 2
s Pygathrix_nigripes_b.ctg79                                 6802371  5 +   6970761 T--T-T------T---T
i Pygathrix_nigripes_b.ctg79                               C 0 I 2
s Pygathrix_nigripes_a.k141_101123                             1763  5 +     18040 T--T-T------T---T
i Pygathrix_nigripes_a.k141_101123                        C 0 I 2
s Rangifer_tarandus.RanTarSib_scaffold_24239                12957  5 +     68503 T--T-C------T---G
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13911238  3 +  90463843 -----t------t---t
i Rattus_norvegicus.chr11                               I 1 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1784727  5 +   2252614 t--t-t------t---t
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           12318  6 -     14454 T-TT-T------T---T
i Rhinopithecus_bieti.k119_102124                       C 0 I 2
s Rhinopithecus_roxellana.NC_044549.1                   206373644  6 - 206558726 t-tt-t------t---t
i Rhinopithecus_roxellana.NC_044549.1                   C 0 I 2
s Rhinopithecus_strykeri.ctg4                            44851292  6 -  45163003 T-TT-T------T---T
i Rhinopithecus_strykeri.ctg4                           C 0 I 2
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                16429  5 +    109198 A--T-C------T---T
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       4735  5 +     12214 T--T-C------T---G
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15669084  3 -  43202129 T--T-T-----------
i Saimiri_boliviensis.NW_024100938.1                    C 0 I 1
s Saimiri_cassiquiarensis.k141_808270                         959  3 +     34089 T--T-T-----------
i Saimiri_cassiquiarensis.k141_808270                   C 0 I 1
s Saimiri_macrodon.k141_2087127                               890  3 -     60842 T--T-T-----------
i Saimiri_macrodon.k141_2087127                         C 0 I 1
s Saimiri_oerstedii.k141_841116                               959  3 +     67014 T--T-T-----------
i Saimiri_oerstedii.k141_841116                         C 0 I 1
s Saimiri_sciureus.k141_1947592                               959  3 +     60816 T--T-T-----------
i Saimiri_sciureus.k141_1947592                         C 0 I 1
s Saimiri_ustus.k141_1282476                                  887  3 -     76454 T--T-T-----------
i Saimiri_ustus.k141_1282476                            C 0 I 1
s Sapajus_apella.ctg10                                   17337467  3 -  30362882 T--T-T-----------
i Sapajus_apella.ctg10                                  C 0 I 1
s Sapajus_macrocephalus.k141_966464                         17068  3 -     62485 T--T-T-----------
i Sapajus_macrocephalus.k141_966464                     C 0 I 1
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   28484  5 -    114521 C--T-C------T---T
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1527475                       24308  3 +     26421 -----T------T---T
i Semnopithecus_entellus.k141_1527475                   I 2 I 2
s Semnopithecus_hypoleucos.k141_761524                       4769  3 +     20762 -----T------T---T
i Semnopithecus_hypoleucos.k141_761524                  I 1 I 2
s Semnopithecus_johnii.k141_1351450                         38502  3 +     40653 -----T------T---T
i Semnopithecus_johnii.k141_1351450                     I 1 I 3
s Semnopithecus_priam.k141_198153                            9061  3 -     12194 -----T------T---T
i Semnopithecus_priam.k141_198153                       I 1 I 2
s Semnopithecus_schistaceus.k141_653647                     22481  3 -     27512 -----T------T---T
i Semnopithecus_schistaceus.k141_653647                 I 1 I 2
s Semnopithecus_vetulus.k141_642050                         31501  4 -     33692 -----T------TT--T
i Semnopithecus_vetulus.k141_642050                     I 1 I 2
s Sigmodon_hispidus.SigHis_scaffold_11332                   94525  5 -    120886 T--G-T------T---C
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 I 1
s Solenodon_paradoxus.SolPar_flattened_line_1012            14730  5 +    739146 T--T-C------T---T
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2236493  8 +   2842873 A--C-G------TTTTA
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             231512  5 -    276980 T--T-C------T---T
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            24093  5 +     62062 T--T-C------T---T
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189269027  5 + 218635234 T--T-C------T---T
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                     13898432  2 +  13920577 ------------T---T
i Symphalangus_syndactylus.tarseq_24                    I 4 I 2
s Tadarida_brasiliensis.TadBra_scaffold_145589               2932  5 -      6213 T--T-A------T---T
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               11869  5 +     45698 T--T-T------T---T
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      803874  5 +   1148477 T--T-C------T---T
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  54536  5 +     99546 T--T-C------T---T
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               23221  3 +     42269 -----C------T---T
i Tarsius_lariang.k141_609102                           C 0 I 2
s Tarsius_wallacei.k141_48636                               56535  3 +     65473 -----C------T---T
i Tarsius_wallacei.k141_48636                           C 0 I 2
s Theropithecus_gelada.CM009951.1                       194003800  5 - 194193292 t--t-t------g---t
i Theropithecus_gelada.CM009951.1                       C 0 I 2
s Tolypeutes_matacus.TolMat_scaffold_269431                   726  5 +      6782 T--T-T------T---T
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  133015  5 -    259118 T--T-C------T---T
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        22879  3 +     38948 -----T------T---T
i Trachypithecus_auratus.k141_738098                    I 1 I 2
s Trachypithecus_crepusculus.k141_1588528                   16606  3 -     32910 -----T------T---T
i Trachypithecus_crepusculus.k141_1588528               I 1 I 2
s Trachypithecus_cristatus.k141_27198                       22504  3 +     24652 -----T------T---T
i Trachypithecus_cristatus.k141_27198                   I 1 I 2
s Trachypithecus_francoisi.k141_1178450                      1389  3 -      3559 -----T------T---T
i Trachypithecus_francoisi.k141_1178450                 I 1 I 2
s Trachypithecus_geei.k141_670367                           39328  3 -     54611 -----T------T---T
i Trachypithecus_geei.k141_670367                       I 1 I 2
s Trachypithecus_germaini.k141_809503                       15327  3 +     17312 -----T------T---T
i Trachypithecus_germaini.k141_809503                   I 1 I 2
s Trachypithecus_hatinhensis.k141_357672                    22697  3 -     25040 -----T------T---T
i Trachypithecus_hatinhensis.k141_357672                I 1 I 2
s Trachypithecus_laotum.k141_171445                          1363  3 +      3528 -----T------T---T
i Trachypithecus_laotum.k141_171445                     I 1 I 2
s Trachypithecus_leucocephalus.k141_283605                  47725  3 +     51589 -----T------T---T
i Trachypithecus_leucocephalus.k141_283605              I 1 I 2
s Trachypithecus_melamera.k141_238507                       10893  3 +     14732 -----T------T---T
i Trachypithecus_melamera.k141_238507                   I 1 I 2
s Trachypithecus_obscurus.k141_1115109                       1371  3 -     28054 -----T------T---T
i Trachypithecus_obscurus.k141_1115109                  I 1 I 2
s Trachypithecus_phayrei.ctg3                            44656166  3 -  44834318 -----T------T---T
i Trachypithecus_phayrei.ctg3                           I 1 I 2
s Trachypithecus_pileatus.k141_469329                        1176  3 +      3372 -----T------T---T
i Trachypithecus_pileatus.k141_469329                   I 1 I 2
s Tragulus_javanicus.TraJav_scaffold_14717                   2372  5 +     90398 T--T-C------T---T
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16078465  5 +  31416278 T--T-T------T---T
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2788285  5 -   3938065 T--G-T------T---T
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                     846  5 +     13056 T--G-T------T---T
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69310490  5 -  96451834 T--T-C------T---T
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 23689  5 -     25548 C--T-C------T---T
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6511102  5 +  28682327 T--T-C------T---T
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  2032  5 -     20643 T--T-T------T---T
i Varecia_rubra.k141_432109                             C 0 I 2
s Varecia_variegata.k141_775891                             21577  5 -     33872 T--T-T------T---T
i Varecia_variegata.k141_775891                         C 0 I 2
s Vicugna_pacos.KN269600.1                                1521809  5 -   2331223 T--T-C------T---T
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                134256  5 -    281493 T--T-C------T---T
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       123580  8 -    134049 A--T-G------TTTTT
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        210780  5 -    227762 T--T-C------T---T
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           3993  5 -      8775 T--T-C------T---T
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Perognathus_longimembris.PerPac_flattened_line_22291      39705  3 -     45160 I
e Dipodomys_stephensi.DipSte_scaffold_44365                 23717  3 +     28912 I
e Dipodomys_ordii.KN672545.1                              3652163  3 +   4240102 I
e Chrysochloris_asiatica.ChrAsi_scaffold_141308              5625 53 -     12508 M
e Megaderma_lyra.MegLyr_scaffold_3562                       61508  0 -    234502 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16291  1 -    119109 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     12283  2 -     20485 I
e Jaculus_jaculus.JH725517.1                              8561873  2 +  11848649 I
e Allactaga_bullata.AllBul_scaffold_70162                    8911  2 -     22067 I
e Perodicticus_potto.k141_713187                            21218  0 -     27972 C
e Perodicticus_ibeanus.k141_117958                           1921  0 -     23713 C
e Nannospalax_galili.KL201303.1                            107449  0 +    362372 C
e Dolichotis_patagonum.DolPat_scaffold_14102                33375  0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             56104 16 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                14631 16 +     26546 I
e Cricetulus_griseus.LT883672.1                          53025429  0 +  72327488 C
e Cavia_tschudii.CavTsc_scaffold_488                       173989  0 +    436027 C
e Cavia_porcellus.DS562889.1                             15795798  0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15783848 16 -  24422027 I

a score=0.000000
s hg38.chr4_GL000008v2_random                                8421 21 +    209709 C-ATT---TGAAT-------CC-----TCT--AA---------TAC-------------AT
s Acinonyx_jubatus.LLWD01000356.1                         2030511 21 +   3721120 A-ATT---TGAGT----C---T-----GCT--TA---------TGA-------------GT
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    108774 20 -    189883 C-CTT---TGAAT--------C-----ATT--AA---------TAC-------------AT
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10653832 21 +  23371972 A-ATC---TGAGT----C---T-----GTT--AA---------TAA-------------GC
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7090533 21 -  16596857 a-att---tgagt------c-t-----GCT--AA---------TAA-------------GT
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allenopithecus_nigroviridis.k141_3103707                  59445 21 +     61638 T-GTT---TGAAT-------CC-----ACT--AG---------TAC-------------AT
i Allenopithecus_nigroviridis.k141_3103707              I 2 C 0
s Allochrocebus_lhoesti.k141_4825038                        51253 21 +     53391 T-GTT---TGAAT-------CC-----ACT--AG---------TAC-------------AT
i Allochrocebus_lhoesti.k141_4825038                    I 2 C 0
s Allochrocebus_preussi.k141_1202907                         1977 21 +     72529 T-GTT---TGAAT-------CC-----ACT--AG---------TAC-------------AT
i Allochrocebus_preussi.k141_1202907                    I 2 C 0
s Allochrocebus_solatus.k141_787528                          1553 21 +      3797 T-GTT---TGAAT-------CC-----ACT--AG---------TAC-------------AT
i Allochrocebus_solatus.k141_787528                     I 2 C 0
s Alouatta_belzebul.k141_1818029                             6643 21 -     18050 C-ATT---TGGAT-------CC-----ACT--AA---------TAC-------------AT
i Alouatta_belzebul.k141_1818029                        I 1 C 0
s Alouatta_caraya.k141_5460                                  7760 21 -     11521 C-ATT---TGGAT-------CC-----ACT--AA---------TAC-------------AT
i Alouatta_caraya.k141_5460                             I 1 C 0
s Alouatta_discolor.k141_811576                              7318 21 -     21359 C-ATT---TGGAT-------CC-----ACT--AA---------TAC-------------AT
i Alouatta_discolor.k141_811576                         I 1 C 0
s Alouatta_juara.k141_1856473                                5701 21 +      7227 C-ATT---TGGAT-------CC-----ACT--AA---------TAC-------------AT
i Alouatta_juara.k141_1856473                           I 1 C 0
s Alouatta_macconnelli.k141_1331706                          6615 21 -     10438 C-ATT---TGGAT-------CC-----ACT--AA---------TAC-------------AT
i Alouatta_macconnelli.k141_1331706                     I 1 C 0
s Alouatta_nigerrima.k141_2718643                            3270 21 +      7047 C-ATT---TGGAT-------CC-----ACT--AA---------TAC-------------AT
i Alouatta_nigerrima.k141_2718643                       I 1 C 0
s Alouatta_palliata.k141_1316127                             6554 21 +     10410 C-ATT---TGGAT-------CC-----ACT--AA---------TAC-------------AT
i Alouatta_palliata.k141_1316127                        I 1 C 0
s Alouatta_puruensis.k141_1374428                             357 21 -     25526 C-ATT---TGGAT-------CC-----ACT--AA---------TAC-------------AT
i Alouatta_puruensis.k141_1374428                       I 1 C 0
s Alouatta_seniculus.k141_990213                             3275 21 +      6429 C-ATT---TGGAT-------CC-----ACT--AA---------TAC-------------AT
i Alouatta_seniculus.k141_990213                        I 1 C 0
s Ammotragus_lervia.NIVO01013474.1                        3517283 18 +   4113121 ---------GAGC----C---C-----ACTACAA---------TAA-------------AT
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      387468 19 -    631301 A-A-----TGAGT--T-----C-----ACT--AA---------TAA-------------AA
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            27916 18 +     33004 ---------GAGC----C---C-----ACTACAA---------TAA-------------AT
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 58949 21 +     78111 C-ATT---TGGAT-------CC-----ACT--AA---------TAC-------------GT
i Aotus_azarae.k141_3170768                             I 1 C 0
s Aotus_griseimembra.k141_3275623                            1880 21 +     22701 C-ATT---TGGAT-------CC-----ACT--AA---------TAC-------------GT
i Aotus_griseimembra.k141_3275623                       I 1 C 0
s Aotus_nancymaae.KZ196176.1                              5745840 21 +   9889416 C-ATT---TGGAT-------CC-----ACT--AA---------TAC-------------GT
i Aotus_nancymaae.KZ196176.1                            I 1 C 0
s Aotus_trivirgatus.k141_1740727                             2432 21 -    104377 C-ATT---TGGAT-------CC-----ACT--AA---------TAC-------------GT
i Aotus_trivirgatus.k141_1740727                        I 1 C 0
s Aotus_vociferans.k141_718647                               2432 21 +     23246 C-ATT---TGGAT-------CC-----ACT--AA---------TAC-------------GT
i Aotus_vociferans.k141_718647                          I 1 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                      455 18 +      5067 A-ACT---TGAAT-------CC-----AGT--AA---------TA----------------
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      14579 21 +     17483 T-ATT---TGAAT-------CC-----ACT--AA---------TAA-------------AT
i Arctocebus_calabarensis.k141_1161114                  I 2 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 5567 21 -     29036 A-ATA---TGAGT--T-----T-----ACT--AA---------TAA-------------GA
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9535693 21 +  39197703 C-ATT---TGGAT-------CC-----ACT--AA---------TAC-------------AT
i Ateles_geoffroyi_b.tarseq_2582                           I 1 C 0
s Ateles_belzebuth.k141_1348307                             56981 21 +     85812 C-ATT---TGGAT-------CC-----ACT--AA---------TAC-------------AT
i Ateles_belzebuth.k141_1348307                         I 1 C 0
s Ateles_chamek.k141_1072810                                 7978 21 +     89302 C-ATT---TGGAT-------CC-----ACT--AA---------TAC-------------AT
i Ateles_chamek.k141_1072810                            I 1 C 0
s Ateles_geoffroyi_a.k141_1300742                             12487 21 -     58268 C-ATT---TGGAT-------CC-----ACT--AA---------TAC-------------AT
i Ateles_geoffroyi_a.k141_1300742                         I 1 C 0
s Ateles_marginatus.k141_899112                             60475 21 +    119057 C-ATT---TGGAT-------CC-----ACT--AA---------TAC-------------AT
i Ateles_marginatus.k141_899112                         I 1 C 0
s Ateles_paniscus.k141_1631200                               2425 21 -     25888 C-ATT---TGGAT-------CC-----ACT--AA---------TAC-------------AT
i Ateles_paniscus.k141_1631200                          I 1 C 0
s Avahi_laniger.k141_2840928                                 3290 21 -     16375 C-ATT---TGAAG-------CC-----ACT--AA---------TAA-------------AT
i Avahi_laniger.k141_2840928                            I 2 C 0
s Avahi_peyrierasi.k141_767228                               9262 21 -      9688 C-ATT---TGAAG-------CC-----ACT--AA---------TAA-------------AT
i Avahi_peyrierasi.k141_767228                          I 2 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26377219 18 +  51448160 ---------GAGC----C---C-----ACTATAG---------TGA-------------AT
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        2450 18 -     13118 ---------GAGC----C---C-----ACTATAG---------TGA-------------AT
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   40383 18 -     72089 ---------GAGC----C---C-----ACTACAA---------TAA-------------AT
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6556530 18 +   6870073 ---------GAGC----C---C-----ACTACAA---------TAA-------------AT
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138136761 18 - 161108492 ---------GAGC----C---C-----ACTACAA---------TAA-------------AT
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     569139 18 -    998990 ---------GAGC----C---C-----ACTACAA---------TAA-------------AT
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136292494 18 - 158972876 ---------GAGC----C---C-----ACTACAA---------TAA-------------AT
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1228115 18 -   1914593 ---------GAGC----C---C-----ACTACAA---------TAA-------------AT
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               110323 21 -    171031 C-ATT---TGGAT-------CC-----ACT--AA---------CAC-------------AT
i Cacajao_ayresi.k141_724503                            I 1 C 0
s Cacajao_calvus.k141_96166                                  9349 21 +    125063 C-ATT---TGGAT-------CC-----ACT--AA---------CAC-------------AT
i Cacajao_calvus.k141_96166                             I 1 C 0
s Cacajao_hosomi.k141_303789                                11397 21 -    216513 C-ATT---TGGAT-------CC-----ACT--AA---------CAC-------------AT
i Cacajao_hosomi.k141_303789                            I 1 C 0
s Cacajao_melanocephalus.k141_1160263                        3936 21 -    134917 C-ATT---TGGAT-------CC-----ACT--AA---------CAC-------------AT
i Cacajao_melanocephalus.k141_1160263                   I 1 C 0
s Camelus_bactrianus.KN276303.1                           3216252 18 -   8989139 ---------GAGC----C---C-----AGTAGAG---------TAA-------------GT
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           394436 18 -  15254737 ---------GAGC----C---C-----AGTAGAG---------TAA-------------GT
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2970173 18 +   6889770 ---------GAGC----C---C-----AGTAGAG---------TAA-------------GT
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11515216 21 +  39901454 A-ATT---TGAGT----C---T-----GCT--AA---------TAA-------------GT
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   10233 21 +     87036 A-ATT---TGAGT----C---T-----GCT--AA---------TAT-------------GT
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11261875 21 -  35597290 A-ATT---TGAGT----C---T-----GCT--AA---------TAA-------------GT
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11084404 21 +  39895921 A-ATT---TGAGT----C---T-----GCT--AA---------TAA-------------GT
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16451438 21 -  44759192 A-ATT---TGAGT----C---T-----GCT--AA---------TAA-------------GT
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21322390 18 + 157394656 ---------GAGC----C---C-----ACTACAA---------TAA-------------AT
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135703617 18 - 157403528 ---------GAGC----C---C-----ACTACAA---------TAA-------------AT
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_647363                  1151  5 +      1887 -------------------------------------------TGA-------------AT
i Capromys_pilorides.CapPil_scaffold_647363             I 5 C 0
s Carlito_syrichta.NW_007248099.1                          305736 21 +    345090 C-ATT---TGAAG-------CC-----ACT--AA---------CAA-------------AT
i Carlito_syrichta.NW_007248099.1                       I 2 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               56645 20 +     67245 A-ATA---T-AGT--T-----C-----ATT--AA---------TAA-------------AA
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   27150 21 +     33760 C-ATT---TGAAT-------CC-----AGT--AA---------TAA-------------GT
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   155959 17 -    276539 ---------GAGC--T-----C-----ACAACAA---------AGA-------------A-
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 I 1
s Cebus_albifrons.Contig22                               18887162 21 -  29618158 C-ATT---TGGAT-------CC-----ACT--AA---------TAC-------------AT
i Cebus_albifrons.Contig22                              I 1 C 0
s Cebus_olivaceus.k141_93739                                 4708 21 -     26817 C-ATT---TGGAT-------CC-----ACT--AA---------TAC-------------AT
i Cebus_olivaceus.k141_93739                            I 1 C 0
s Cebus_unicolor.k141_239009                                 8948 21 +     25043 C-ATT---TGGAT-------CC-----ACT--AA---------TAC-------------AT
i Cebus_unicolor.k141_239009                            I 1 C 0
s Cephalopachus_bancanus.k141_702587                         4785 21 +     21754 C-ATT---TGAAG-------CC-----ACT--AA---------CAA-------------AT
i Cephalopachus_bancanus.k141_702587                    I 2 C 0
s Ceratotherium_simum.JH767818.1                          4360430 21 +   7569818 A-ATG---TGAGT--T-----C-----ACT--AA---------TAA-------------AT
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623          185 21 -      9338 A-ATG---TGAGT--T-----C-----ACT--AA---------TAA-------------AT
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    N 0 C 0
s Cercocebus_atys.KQ010443.1                              6551240 21 +   6739814 t-gtt---tgaat-------cc-----ACT--AG---------TAC-------------AT
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      52717 21 -     54931 T-GTT---TGAAT-------CC-----ACT--AG---------TAC-------------AT
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         17701 21 -     19697 T-GTT---TGAAT-------CC-----ACT--AG---------TAC-------------AT
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         55232 21 -    107033 T-GTT---TGAAT-------CC-----ACT--AG---------TAC-------------AT
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        1675 21 -      3853 T-GTT---TGAAT-------CC-----ACT--AG---------TAC-------------AT
i Cercopithecus_ascanius.k141_3371259                   I 2 C 0
s Cercopithecus_cephus.k141_598190                          25607 21 +     30494 T-GTT---TGAAT-------CC-----ACT--AG---------TAC-------------AT
i Cercopithecus_cephus.k141_598190                      I 2 C 0
s Cercopithecus_diana.k141_1490386                           1631 21 -      4022 T-GTT---TGAAT-------CC-----ACT--AG---------TAC-------------AT
i Cercopithecus_diana.k141_1490386                      I 2 C 0
s Cercopithecus_hamlyni.k141_381099                          1524 21 -      3505 T-GTT---TGAAT-------CC-----ACT--AG---------TAC-------------AT
i Cercopithecus_hamlyni.k141_381099                     I 2 C 0
s Cercopithecus_lowei.k141_623764                           20328 21 +     35983 T-GTT---TGAAT-------CT-----ACT--AG---------TAC-------------AT
i Cercopithecus_lowei.k141_623764                       I 2 C 0
s Cercopithecus_albogularis.ctg51                              11986850 21 +  12117833 T-GTT---TGAAT-------CC-----ACT--AG---------TAC-------------AT
i Cercopithecus_albogularis.ctg51                             I 2 C 0
s Cercopithecus_mona.ctg12                               46473603 21 +  46592721 T-GTT---TGAAT-------CT-----ACT--AG---------TAC-------------AT
i Cercopithecus_mona.ctg12                              I 2 C 0
s Cercopithecus_neglectus.k141_1474992                      31430 21 +     33420 T-GTT---TGAAT-------CC-----ACT--GG---------TAC-------------AT
i Cercopithecus_neglectus.k141_1474992                  I 2 C 0
s Cercopithecus_nictitans.k141_675209                        1466 21 -      3443 T-GTT---TGAAT-------CC-----ACT--AG---------TAC-------------AT
i Cercopithecus_nictitans.k141_675209                   I 2 C 0
s Cercopithecus_petaurista.k141_2037881                      2457 21 -      4669 T-GTT---TGGAT-------CC-----ACT--AG---------TAC-------------AT
i Cercopithecus_petaurista.k141_2037881                 I 2 C 0
s Cercopithecus_pogonias.k141_1977419                        2257 21 -      4411 T-GTT---TGAAT-------CC-----ACT--AG---------TAC-------------AT
i Cercopithecus_pogonias.k141_1977419                   I 2 C 0
s Cercopithecus_roloway.k141_3372345                         1782 21 -      4205 T-GTT---TGAAT-------CC-----ACT--AG---------TAC-------------AT
i Cercopithecus_roloway.k141_3372345                    I 2 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_1070855             6 18 -      1715 C-TTT---AGAAT-------CC-----ACT--AA---------TA----------------
i Chaetophractus_vellerosus.ChaVel_scaffold_1070855     C 0 C 0
s Cheirogaleus_major.k141_1157592                           55627 21 -     68416 C-ATT---TGAAG-------AC-----ACT--AA---------TAA-------------AT
i Cheirogaleus_major.k141_1157592                       I 3 C 0
s Cheirogaleus_medius.k141_133808                            4676 21 +     13308 C-ATT---TGAAG-------CC-----ACT--AA---------TAA-------------AT
i Cheirogaleus_medius.k141_133808                       I 3 C 0
s Cheracebus_lucifer.k141_619653                             1961 21 -     18223 C-ATT---TGGAT-------CC-----ACT--AA---------TAC-------------CT
i Cheracebus_lucifer.k141_619653                        I 1 C 0
s Cheracebus_lugens.k141_203936                             18984 21 +     25473 C-ATT---TGGAT-------CC-----ACT--AA---------TAC-------------CT
i Cheracebus_lugens.k141_203936                         I 1 C 0
s Cheracebus_regulus.k141_2128895                           38023 21 +     57117 C-ATT---TGGAT-------CC-----ACT--AA---------TAC-------------CT
i Cheracebus_regulus.k141_2128895                       I 1 C 0
s Cheracebus_torquatus.k141_315545                          42698 21 +     54541 C-ATT---TGGAT-------CC-----ACT--AA---------TAC-------------CT
i Cheracebus_torquatus.k141_315545                      I 1 C 0
s Chinchilla_lanigera.JH721867.1                         15958513 21 +  43084221 T-ATA---GTGAT-------CT-----ACT--AA---------TAA-------------AT
i Chinchilla_lanigera.JH721867.1                        I 403 C 0
s Chiropotes_israelita.k141_1189915                         67544 21 +    196370 C-ATT---TGGAT-------CC-----ACT--AA---------CAC-------------AT
i Chiropotes_israelita.k141_1189915                     I 1 C 0
s Chiropotes_sagulatus.k141_773804                          11719 21 +     40510 C-ATT---TGGAT-------CC-----ACT--AA---------CAC-------------AT
i Chiropotes_sagulatus.k141_773804                      I 1 C 0
s Chlorocebus_aethiops.ctg22                             15135063 21 -  15256731 T-GTT---TGAAT-------CC-----ACT--AG---------TAC-------------AT
i Chlorocebus_aethiops.ctg22                            I 2 C 0
s Chlorocebus_pygerythrus.k141_1486215                      30109 21 -     53260 T-GTT---TGAAT-------CC-----ACT--AG---------TAC-------------AT
i Chlorocebus_pygerythrus.k141_1486215                  I 2 C 0
s Chlorocebus_sabaeus.CM001963.2                        101140558 21 + 101219884 t-gtt---tgaat-------tc-----aCT--AG---------TAC-------------AT
i Chlorocebus_sabaeus.CM001963.2                        I 2 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                13624 21 -     21363 C-ATT---TGAAT-------CC-----ACT--AA---------TAA-------------AT
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           758930 21 +    964067 C-ATT---TGAAT-------CC-----ACT--AA---------TAA-------------AT
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_141308              5678  1 -     12508 ------------------------------------------------------------N
i Chrysochloris_asiatica.ChrAsi_scaffold_141308         M 53 C 0
s Colobus_angolensis.KN985967.1                          10879138 20 +  10971483 --gtt---tgaat-------cc-----ACT--AG---------TAC-------------AT
i Colobus_angolensis.KN985967.1                         I 2 C 0
s Colobus_guereza.LG08                                  147660296 20 + 156195979 --GTT---TGAAT-------CC-----ACT--AG---------TAC-------------AT
i Colobus_guereza.LG08                                  I 2 C 0
s Colobus_polykomos.k141_1406057                            12282 20 +     23629 --GTT---TGAAT-------CC-----ACT--AG---------TAC-------------AT
i Colobus_polykomos.k141_1406057                        I 2 C 0
s Condylura_cristata.JH655880.1                          60609893 21 +  78930452 a-att---tgaaa------c-C-----ACT--AA---------TAA-------------AT
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         36351 21 -     40477 A-ATC---TGAGT----C---C-----ACT--AA---------TAA-------------AT
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 274218 21 -    399297 C-CTT---TGTAT-------AC-----TCT--AA---------TAA-------------AT
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             15877 20 -     19186 T-AAC---TCTCA--------A-----ATT--AA---------TAT-------------GT
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            48538 21 -     70449 A-ATT---TGAGT----C---T-----ACT--TA---------AGA-------------GT
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  204951 21 -    956709 C-ACT---TGAAA-------CC-----ACT--GA---------TAA-------------TT
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 27219  5 -     67205 -------------------------------------------TGA-------------AT
i Ctenomys_sociabilis.CteSoc_scaffold_19489             I 5 C 0
s Dasypus_novemcinctus.JH568778.1                          178811 18 -   6883506 c-ttt---agaat-------cc-----ACT--AA---------TA----------------
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16841498 21 +  31942871 C-AGT---TGAAT-------CC-----ACT--AA---------TAA-------------AT
i Daubentonia_madagascariensis.ctg11                    I 2 C 0
s Delphinapterus_leucas.KZ290064.1                       80033959 18 -  96802777 ---------GAGC------G-C-----ACTATAG---------TGA-------------AT
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18695955 21 -  18957592 A-ATA---TGAGT------t-c-----act--aa---------taa-------------aa
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 319087 21 +    993696 A-ATT---TGAGT--T-----C-----ACT--AA---------TAA-------------AT
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_170113                  350 21 +       818 A-ATG---TGAGT--T-----C-----ACT--AA---------TAA-------------AT
i Diceros_bicornis.DicBicMic_scaffold_170113            C 0 C 0
s Echinops_telfairi.JH980316.1                           22991228 20 -  44670279 C-AAT---GAAAG-------CC-----ACT--AA---------TAC-------------A-
i Echinops_telfairi.JH980316.1                          C 0 I 2
s Eidolon_helvum.KE772537.1                                  9338 21 +     24177 A-ATT---AGAAT----C---C-----ACT--AA---------TAG-------------AT
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1488653 18 +   1727528 ---------GAGC----C---C-----ACTACAA---------TAA-------------AT
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7803387 21 +  15467074 C-AGT---TGAGT-------CC-----ATT--AA---------TAA-------------AT
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        235862 21 -    369425 c-ctt---tgaat-------cc-----act--aa---------taa-------------ag
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           2871 21 -      7838 C-CTT---TGAAT-------cc-----act--aa---------taa-------------ag
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85868254 21 +  99434291 A-ATT---TGAGT----C---T-----GCT--AA---------TAA-------------GT
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Equus_asinus.JREZ01000062.1                             5849817 21 -   7175178 A-ATT---TGAGT--T-----C-----cct--aa---------taa-------------at
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13348320 21 +  41866177 A-ATT---TGAGT--T-----C-----cct--aa---------taa-------------at
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                           9810 21 +     92910 A-ATT---TGAGT--T-----C-----cct--aa---------taa-------------at
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11529424  7 +  16010500 --------------------------------aa---------taa-------------at
i Erinaceus_europaeus.JH835290.1                        N 0 C 0
s Erythrocebus_patas.Contig8                             48767242 21 -  48907691 T-GGT---TGAAT-------CC-----ACT--AG---------TAC-------------AT
i Erythrocebus_patas.Contig8                            I 2 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          312103 18 +    330699 ---------GAGC----C---C-----ACTATAG---------TGA-------------AT
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             58532 18 +     89355 ---------GAGC----C---C-----ACTATAG---------TGA-------------AT
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              1697 21 +     13586 C-ATT---TGAAG-------CC-----ACT--AA---------TAA-------------AT
i Eulemur_albifrons.k141_715837                         I 2 C 0
s Eulemur_collaris.k141_311830                               1633 21 -      6809 C-ATT---TGAAG-------CC-----ACT--AA---------TAA-------------AT
i Eulemur_collaris.k141_311830                          I 2 C 0
s Eulemur_coronatus.k141_3240342                             8105 21 +     36558 C-ATT---TGAAG-------CC-----ACT--AA---------TAA-------------AT
i Eulemur_coronatus.k141_3240342                        I 2 C 0
s Eulemur_flavifrons.k141_903901                             4421 21 +     60246 C-ATT---TGAAG-------CC-----ACT--AA---------TAA-------------AT
i Eulemur_flavifrons.k141_903901                        I 2 C 0
s Eulemur_fulvus.k141_653297                                 7909 21 +    109717 C-ATT---TGAAG-------CC-----ACT--AA---------TAA-------------AT
i Eulemur_fulvus.k141_653297                            I 2 C 0
s Eulemur_macaco.k141_1341545                               12283 21 +     16540 C-ATT---TGAAG-------CC-----ACT--AA---------TAA-------------AT
i Eulemur_macaco.k141_1341545                           I 2 C 0
s Eulemur_mongoz.k141_825972                                12560 21 +     27497 C-ATT---TGAAG-------CC-----ACT--AA---------TAA-------------AT
i Eulemur_mongoz.k141_825972                            I 3 C 0
s Eulemur_rubriventer.k141_411740                           15021 21 +     26808 C-ATT---TTAAG-------CC-----ACT--AA---------TAA-------------AT
i Eulemur_rubriventer.k141_411740                       I 2 C 0
s Eulemur_rufus.k141_1620292                                29749 21 +     46535 C-ATT---TGAAG-------CC-----ACT--AA---------TAA-------------AT
i Eulemur_rufus.k141_1620292                            I 2 C 0
s Eulemur_sanfordi.k141_186399                              12472 21 -     29447 C-ATT---TGAAG-------CC-----ACT--AA---------TAA-------------AT
i Eulemur_sanfordi.k141_186399                          I 2 C 0
s Felis_catus.CM001386.2                                129889491 21 - 159252932 A-ATT---TGAGT----C---T-----GCT--TA---------TGA-------------GT
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129276565 21 - 158578461 A-ATT---TGAGT----C---T-----GCT--TA---------TGA-------------GT
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 17700 21 +     52776 A-ATT---TGAGT----C---T-----GCT--TA---------TGA-------------GT
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13889696 21 -  19261668 c-att---tgaat-------tt-----act--AA---------TAA-------------AT
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     207642 21 -    847004 C-ATT---TGAAT-------CC-----ACT--AA---------TAA-------------AT
i Galago_moholi.ctg555                                  I 2 C 0
s Galago_senegalensis.k141_964197                           10022 21 -     43889 C-ATT---TGAAT-------CC-----ACT--AA---------TAA-------------AT
i Galago_senegalensis.k141_964197                       I 2 C 0
s Galagoides_demidoff.k141_1769638                           7071 21 +     27357 C-ATT---TGAAT-------CC-----ACT--AA---------TAA-------------AT
i Galagoides_demidoff.k141_1769638                      I 2 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               152955 21 +    324696 C-ATT---TGAAT-------CC-----ACT--GA---------TAA-------------GT
i Galeopterus_variegatus.GalVar_scaffold_354            I 1 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    178166 18 -    189561 ---------GAGC----C---C-----ACTACAA---------TAA-------------AT
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                            9359 21 -     18683 T-ATT---TGGAT-------CC-----ATT--AA---------TAA-------------AT
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               1816 21 -     14630 C-ATT---TGAAT-------CC-----ACT--GA---------TAC-------------AT
i Gorilla_beringei.k141_111300                          I 2 C 0
s Gorilla_gorilla.LT578340.1                            119648914 21 - 195582420 c-att---tgaat-------cc-----ACT--GA---------TAC-------------AT
i Gorilla_gorilla.LT578340.1                            I 2 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   73911 21 +    118900 C-ATT---TGGAT-------CC-----ACT--AA---------TAA-------------AT
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                         2243 21 +      3980 C-ATT---TGAAG-------CC-----ACT--AA---------TAA-------------AT
i Hapalemur_alaotrensis.k141_1198205                    I 2 C 0
s Hapalemur_gilberti.k141_97962                             24723 21 +     26611 C-ATT---TGAAG-------CC-----ACT--AA---------TAA-------------AT
i Hapalemur_gilberti.k141_97962                         I 2 C 0
s Hapalemur_griseus.k141_1387522                             2177 21 +     56096 C-ATT---TGAAG-------CC-----ACT--AA---------TAA-------------AT
i Hapalemur_griseus.k141_1387522                        I 2 C 0
s Hapalemur_meridionalis.k141_186231                        25450 21 -     42470 C-ATT---TGAAG-------CC-----ACT--AA---------TAA-------------AT
i Hapalemur_meridionalis.k141_186231                    I 2 C 0
s Hapalemur_occidentalis.k141_797938                        42047 21 -     54384 C-ATT---TGAAG-------CC-----ACT--AA---------TAA-------------AT
i Hapalemur_occidentalis.k141_797938                    I 2 C 0
s Helogale_parvula.HelPar_flattened_line_22962              13741 21 +     53719 A-GTT---TGAGT----C---T-----ACT--TT---------GTA-------------GT
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                24652 18 -     91191 ---------GAGC----C---C-----ACTACAA---------TAA-------------AT
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2547807 21 +  31725842 c-att---tgaac-------tT-----ACT--AA---------TAA-------------AT
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               53224 22 +     73687 C-AGG---TGAAT-------CC-----ACCA-AA---------TAA-------------AT
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              144226 18 +    277961 ---------GAGC----C---C-----ACTGTAG---------TAA-------------AT
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      275649 21 -    477199 A-ATC---GGAGT----C---C-----AGT--AA---------TAA-------------AT
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              4803 21 -      9143 A-ATC---TGAGT----C---C-----ACT--AA---------TAA-------------AT
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg649                                    98486 21 +    115816 C-ATT---TGAAT-------CC-----ACT--AA---------TAC-------------AT
i Hoolock_leuconedys.ctg649                                I 2 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 12810 21 -     67322 A-ATT---TGAGT----C---T-----GCT--TA---------TGA-------------GT
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hylobates_abbotti.k141_493872                              1623 21 +      5897 C-ATT---TGAAT-------CC-----ACT--AA---------TAC-------------AT
i Hylobates_abbotti.k141_493872                         I 3 C 0
s Hylobates_agilis.k141_282275                                837 21 +      1846 C-ATT---TGAAT-------CC-----ACT--AA---------TAC-------------AT
i Hylobates_agilis.k141_282275                          I 4 C 0
s Hylobates_klossii.k141_584463                                 0 21 -      1009 C-ATT---TGAAT-------CC-----ACT--AA---------TAC-------------AT
i Hylobates_klossii.k141_584463                         n 133 C 0
s Hylobates_muelleri.k141_1133650                            1058 21 -      2775 C-ATT---TGAAT-------CC-----ACT--AA---------TAC-------------AT
i Hylobates_muelleri.k141_1133650                       I 3 C 0
s Hylobates_pileatus_a.tarseq_592                             29660 21 -     60944 C-ATT---TGAAT-------CC-----ACT--AA---------TAC-------------AT
i Hylobates_pileatus_a.tarseq_592                         I 2 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     2779 21 +     22540 C-ATT---TCAAA-------CT-----ACT--AA---------TAA-------------AT
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7122577 18 +  13083262 T-ATT---TGAAT-------CC-----AAT--AA---------TA----------------
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_3334527                                   8688 21 +      9207 C-ATT---TGAAG-------CC-----ACT--AA---------TAA-------------AT
i Indri_indri.k141_3334527                              I 2 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               5886 18 +     17520 ---------GACC----C---C-----ACTATAG---------TGA-------------AT
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               20718 18 +     37189 ---------GAGC----C---C-----ACTGTAG---------TGG-------------AT
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          46536 21 -    147782 C-ATT---TGGAT-------CC-----ACT--AA---------TAC-------------AT
i Lagothrix_lagothricha.k141_12968                      I 1 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   110833 20 -    115756 A-ATT---TGAAT--T-----C-----ACT--AA----------AA-------------AT
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258403726 21 - 285822530 C-ATT---TGAAG-------CC-----ACT--AA---------TAA-------------AT
i Lemur_catta.scaffold_1                                I 2 C 0
s Lepilemur_ankaranensis.k141_884009                        20624 21 +     39228 C-ATT---TGAAG-------CC-----ACT--GA---------TAA-------------AT
i Lepilemur_ankaranensis.k141_884009                    I 4 C 0
s Lepilemur_dorsalis.k141_134267                            49998 21 +     63517 C-ATT---TGAAG-------CC-----ACT--GA---------TAA-------------AT
i Lepilemur_dorsalis.k141_134267                        I 2 C 0
s Lepilemur_ruficaudatus.k141_617879                        75220 21 +    116806 C-ATT---TGAAG-------CC-----ACT--GA---------TAA-------------AT
i Lepilemur_ruficaudatus.k141_617879                    I 2 C 0
s Lepilemur_septentrionalis.k141_578524                     28261 21 -     33031 C-ATT---TGAAG-------CC-----ACT--GA---------TAA-------------AT
i Lepilemur_septentrionalis.k141_578524                 I 4 C 0
s Leptonychotes_weddellii.KB714749.1                      3082500 21 -   3498232 C-ATT---TGAGT----C---T-----GCT--CC---------TAA-------------GG
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                     9724 20 +     22452 A-TTT---TGAAT--------C-----ACT--AA---------TAA-------------AT
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            133061 18 +   3060487 ---------GATC----C---C-----ACTATAG---------TGA-------------AT
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19244327 21 +  19376315 T-GTT---TGAAT-------CC-----ACT--AG---------TAC-------------AT
i Lophocebus_aterrimus.ctg55                            I 2 C 0
s Loris_lydekkerianus.k141_550999                            7367 21 +     84689 C-ATT---TTAAT-------CC-----ATT--AA---------TAA-------------AT
i Loris_lydekkerianus.k141_550999                       I 2 C 0
s Loris_tardigradus.ctg97                                 3775118 21 +   6799190 C-ATT---TTAAT-------CC-----ATT--AA---------TAA-------------AT
i Loris_tardigradus.ctg97                               I 2 C 0
s Loxodonta_africana.GL010040.1                          20587798 21 -  62548349 C-AAT---TGAAT-------CC-----ACT--AA---------TAA-------------AG
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11083860 21 +  39895028 A-ATT---TGAGT----C---T-----GCT--AA---------TAA-------------GT
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             16012 21 +     74745 T-GTT---TGAAT-------CC-----ACT--AG---------TAC-------------AT
i Macaca_arctoides.k141_2201161                         I 2 C 0
s Macaca_assamensis.Contig65                             12702518 21 +  12821369 T-GTT---TGAAT-------CC-----ACT--AG---------TAC-------------AT
i Macaca_assamensis.Contig65                            I 2 C 0
s Macaca_cyclopis.k119_1168412                               4614 21 +      6569 T-GTT---TGAAT-------CC-----ACT--AG---------TAC-------------AT
i Macaca_cyclopis.k119_1168412                          I 2 C 0
s Macaca_fascicularis.k141_155037                           42915 21 +     63263 T-GTT---TGAAT-------CC-----ACT--AG---------TAC-------------AT
i Macaca_fascicularis.k141_155037                       I 6 C 0
s Macaca_fuscata.k119_1068107                               11491 21 +     12679 T-GTT---TGAAT-------CC-----ACT--AG---------TAC-------------AT
i Macaca_fuscata.k119_1068107                           I 4 C 0
s Macaca_leonina.k141_3421209                                1061 24 +      3017 T-GTTGTTTGAAT-------CC-----ACT--AG---------TAC-------------AT
i Macaca_leonina.k141_3421209                           I 2 C 0
s Macaca_maura.k141_251854                                  42673 24 -     79256 T-GTTGTTTGAAT-------CC-----ACT--AG---------TAC-------------AT
i Macaca_maura.k141_251854                              I 2 C 0
s Macaca_mulatta.NC_041755.1                            196031594 21 + 196197964 t-gtt---tgaat-------cc-----ACT--AG---------TAC-------------AT
i Macaca_mulatta.NC_041755.1                            I 2 C 0
s Macaca_nemestrina.KQ004885.1                           11441697 24 +  11645122 t-gttgtttgaat-------cC-----ACT--AG---------TAC-------------AT
i Macaca_nemestrina.KQ004885.1                          I 2 C 0
s Macaca_nigra.k141_282495                                   1623 21 -     46448 T-GTT---TGAAT-------CC-----ACT--AG---------TAC-------------AT
i Macaca_nigra.k141_282495                              I 2 C 0
s Macaca_radiata.k141_1580474                                1453 21 -      3617 T-GTT---TGAAT-------CC-----ACT--AG---------TAC-------------AT
i Macaca_radiata.k141_1580474                           I 4 C 0
s Macaca_siberu.k141_741907                                 11783 24 -     55006 T-GTTGTTTGAAT-------CC-----ACT--AG---------TAC-------------AT
i Macaca_siberu.k141_741907                             I 2 C 0
s Macaca_silenus.Contig12                                43836822 22 +  43892939 ---TTGTTTGAAT-------CC-----ACT--AG---------TAC-------------AT
i Macaca_silenus.Contig12                               I 2 C 0
s Macaca_thibetana.k99_116940                                4046 21 -      5978 T-GTT---TGAAT-------CC-----ACT--AG---------TAC-------------AT
i Macaca_thibetana.k99_116940                           I 2 C 0
s Macaca_tonkeana.k141_2870633                               1625 24 -     27140 T-GTTGTTTGAAT-------CC-----ACT--AG---------TAC-------------AT
i Macaca_tonkeana.k141_2870633                          I 2 C 0
s Mandrillus_leucophaeus.scaffold125                     43433488 21 -  43563597 T-GTT---TGAAT-------CC-----ACT--AG---------TAC-------------AT
i Mandrillus_leucophaeus.scaffold125                    I 2 C 0
s Mandrillus_sphinx.Contig144                             4446314 21 -   4543643 T-GTT---TGAAT-------CC-----ACT--AG---------TAC-------------AT
i Mandrillus_sphinx.Contig144                           I 2 C 0
s Manis_javanica.JSZB01003966.1                            143128 21 +    252755 A-ATT---TGAGT----C---C-----ACT--AA---------TAA-------------AT
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             33192 21 +     58827 A-ATT---TGAGT----C---C-----ACT--AA---------TAA-------------AT
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36870424 18 +  64221397 t-att---tgaat-------cC-----AAT--AA---------TA----------------
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_1828            225752 21 -    226874 A-ATT---TGAGT----C---T-----GCT--AA---------TAA-------------GT
i Mellivora_capensis.MelCap_flattened_line_1828         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233                8230 20 +     15977 C--TT---TAAAT-------CT-----ACT--AA---------TAA-------------AT
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1043126 21 -  26018355 C-CTT---TGAAA-------CC-----ACT--AG---------TAG-------------TG
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_183284                    757 18 +      2166 ---------GAGC----C---C-----ACTATAG---------TAA-------------AT
i Mesoplodon_bidens.MesBid_scaffold_183284              C 0 C 0
s Microcebus_murinus.CM007691.1                          16506843 21 +  47401472 c-att---tgaag-------cC-----ACT--AA---------TAA-------------AT
i Microcebus_murinus.CM007691.1                         I 2 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  28174 20 -     48017 C-AAT---GAAAC-------CC-----ACT--AA---------TAA-------------A-
i Microgale_talazaci.MicTal_scaffold_34660              C 0 I 2
s Micronycteris_hirsuta.MicHir_scaffold_37978               19804 21 -     32043 A-ATA---TGAGA--T-----C-----ACT--AA---------TAA-------------AA
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22816010 21 -  98408828 c-ctt---tcaat-------cc-----act--aa---------taa-------------ag
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8206525 21 +  10048721 A-ATT---TGAGC--T-----C-----ACT--AA---------TAA-------------AT
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            31206 21 +     45743 A-ATT---TGCGC--T-----C-----ACT--AA---------TAA-------------AT
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        32161 21 +     34273 T-GTT---TGAAT-------CC-----ACT--AG---------TAC-------------AT
i Miopithecus_ogouensis.k141_2666161                    I 2 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         7798 21 -    104932 C-ATT---TGAGT----C---T-----GCT--CC---------TAA-------------GG
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     2256 21 +      8497 C-ATT---TGAAG-------CC-----ACT--AA---------TAA-------------AT
i Mirza_zaza.k141_226143                                I 2 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 143484 18 +    154973 ---------GAGC------G-C-----ACTATAG---------TGA-------------AT
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                158337 21 +    265003 A-ATG---GGAGT--T-----C-----ACT--AA---------TGA-------------AG
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 1751 18 -      4346 ---------GAGC----C---C-----ACGACAA---------TAA-------------AT
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  141431 21 -    168139 A-ATT---TAAGT----C---T-----ACT--TT---------GGA-------------GT
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          16342 21 -    100666 A-ATT---TGAAT--T-----C-----ACT--GA---------TAA-------------AT
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70761876 21 +  92629107 c-ttt---tgaat-------cc-----aTT--AA---------CAA-------------AT
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75485000 21 +  98207768 c-ttt---tgaat-------cc-----aCT--AA---------CAA-------------AT
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67549316 21 +  89017189 c-ttt---tgaat-------CC-----ACT--AA---------CAA-------------AT
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74324419 21 +  97876770 c-ttt---tgaat-------cc-----aCT--AA---------CAA-------------AT
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              7871 21 +     98495 C-TTT---TGAAT-------CC-----ACT--AA---------TAA-------------AT
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4420647 21 -  28371801 A-ATT---TGAGT----C---T-----GCT--AA---------TAA-------------GT
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     86842  5 -    117718 -------------------------------------------TGA-------------AT
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 5 C 0
s Myotis_brandtii.KE161952.1                               964669 21 +   8389877 A-ATT---TGAAT--T-----C-----ACT--GA---------CAA-------------AT
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5016346 21 +   6462685 A-ATT---TGAAT--T-----C-----ACT--GA---------CAA-------------AT
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3462255 21 -   3747815 A-ATT---TGAAT--T-----C-----ACT--GA---------CAA-------------AT
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         7452 21 +     66751 A-ATT---TGAAT--T-----C-----ACT--GA---------CAA-------------AT
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             2197 21 -      8794 C-ATT---TCAAT-------CA-----ACT--AA---------TGA-------------AT
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        I 1 C 0
s Nasalis_larvatus.k141_153429                               4526 20 +     48152 --GTT---TGAAC-------CC-----ACT--AG---------TAC-------------AT
i Nasalis_larvatus.k141_153429                          I 2 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4481399 21 -  14209539 C-ATT---TGAAT----C---T-----GCT--CC---------TAA-------------GG
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3948093 18 -   4490290 ---------GAGC------G-C-----ACTATAG---------TGA-------------AT
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  46456 21 +     94413 A-ATA---TGAGT--T-----C-----ACT--AA---------TAA-------------AA
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1223136                          10292 21 -     11253 C-ATT---TGAAT-------CC-----ACT--AA---------TAC-------------AT
i Nomascus_annamensis.k141_1223136                      I 2 C 0
s Nomascus_concolor.k141_468488                               935 21 -      1482 C-ATT---TGAAT-------CC-----ACT--AA---------TAC-------------AT
i Nomascus_concolor.k141_468488                         I 2 C 0
s Nomascus_gabriellae.k141_906566                             924 21 -      2544 C-ATT---TGAAT-------CC-----ACT--AA---------TAC-------------AT
i Nomascus_gabriellae.k141_906566                       I 2 C 0
s Nomascus_siki_b.tarseq_80                             21398 21 -  18771707 C-ATT---TGAAT-------CC-----ACT--AA---------TAC-------------AT
i Nomascus_siki_b.tarseq_80                         I 2 C 0
s Nomascus_siki_a.k141_844529                                   673 20 +      2124 --ATT---TGAAT-------CC-----ACT--AA---------TAC-------------AT
i Nomascus_siki_a.k141_844529                             I 2 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                26856 21 +   3668941 A-ATT---TGAGT----C---T-----GCT--AA---------TAA-------------GT
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65563697 21 -  95554990 C-ATG---TGAAT-------CC-----ATT--AA---------TAA-------------AT
i Nycticebus_bengalensis.LG16                           I 2 C 0
s Nycticebus_coucang.k141_2051882                             542 21 +      6470 C-ATG---TGAAT-------CC-----ATT--AA---------TAA-------------AT
i Nycticebus_coucang.k141_2051882                       I 2 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65666066 21 +  89412551 C-ATG---TGAAT-------CC-----ATT--AA---------TAA-------------AT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     I 2 C 0
s Ochotona_princeps.JH802095.1                            4992386 20 -  23139505 A-ATT---TGGAT--------C-----ATT--AA---------TAA-------------AT
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3675574  5 +  10294119 -------------------------------------------tga-------------at
i Octodon_degus.JH651621.1                              I 5 C 0
s Odobenus_rosmarus.KB229369.1                             676057 21 -   3126709 C-ATT---TGAGT----C---T-----GCT--CC---------TAA-------------GG
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1076876 18 +   1425656 ---------GAGC----C---C-----ACTACAA---------TAA-------------AT
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         34038 18 +     78940 ---------GAGC----C---C-----ACTACAA---------TAA-------------AT
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  121341 21 +    145789 C-TTT---TGAAT-------CC-----ACT--CA---------TAA-------------AG
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  33282 21 +     62360 C-CTT---TGAAT-------CC-----ACC--AA---------TGA-------------AT
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7221777 18 -   7562323 ---------GAGC------G-C-----ACTATAG---------TGA-------------AT
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              40032 21 -     66828 C-AAT---TGTAC-------TC-----AAT--GA---------TAA-------------AT
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 I 110
s Oryctolagus_cuniculus.CM000803.1                      141872373 20 + 163896628 a-ttt---tgaat--------c-----act--aa---------taa-------------at
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      304191 21 -    505867 A-ATT---TGAGT----C---T-----GCT--AA---------TAA-------------GT
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       35710 21 +     38679 C-ATT---TGAAT-------CC-----ACT--AA---------TAA-------------AT
i Otolemur_crassicaudatus.k141_321880                   I 2 C 0
s Otolemur_garnettii.GL873528.1                          18005151 21 -  38779656 C-ATT---TGAAT-------CC-----ACt--aa---------taa-------------at
i Otolemur_garnettii.GL873528.1                         I 2 C 0
s Ovis_aries.CM001582.2                                 134074454 18 - 275406953 ---------GAGC----C---C-----ACTACAA---------TAA-------------AT
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      75668 18 +    140051 ---------GAGC----C---C-----ACTACAA---------TAA-------------AT
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.AJFE02000950.1                                 287 21 -      1008 c-att---tgaat-------cc-----ACT--AA---------TAC-------------AT
i Pan_paniscus.AJFE02000950.1                           I 6 I 26
s Pan_troglodytes.KZ622857.1                               324140 21 +    772158 c-att---tgaat-------cc-----ACT--AA---------TAC-------------AT
i Pan_troglodytes.KZ622857.1                            I 7 I 63
s Panthera_onca.PanOnc_flattened_line_1615                  30654 21 +    295523 A-ATT---TGAGT----C---T-----GCT--TA---------TGA-------------GT
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3634258 21 +  18214204 A-ATT---TGAGT----C---T-----GCT--TA---------TGA-------------GT
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5024035 21 -   6340057 A-ATT---TGAGT----C---T-----GCT--TA---------TGA-------------GT
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1063312 18 -   1292953 ---------GGGC----C---C-----ACTACAA---------TAA-------------AT
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188152272 21 - 188283584 t-gtt---tgaat-------cc-----ACT--AG---------TAC-------------AT
i Papio_anubis.CM001492.2                               I 3 C 0
s Papio_cynocephalus.k141_386926                            48484 21 +     76494 T-GTT---TGAAT-------CC-----ACT--AG---------TAC-------------AT
i Papio_cynocephalus.k141_386926                        I 2 C 0
s Papio_hamadryas.Contig15                               47509669 21 +  47705337 T-GTT---TGAAT-------CC-----ACT--AG---------TAC-------------AT
i Papio_hamadryas.Contig15                              I 2 C 0
s Papio_kindae.k141_5458022                                 63651 21 -    104429 T-GTT---TGAAT-------CC-----ACT--AG---------TAC-------------AT
i Papio_kindae.k141_5458022                             I 2 C 0
s Papio_papio.k141_3561084                                  13437 21 -     29451 T-GTT---TGAAT-------CC-----ACT--AG---------TAC-------------AT
i Papio_papio.k141_3561084                              I 2 C 0
s Papio_ursinus.k141_3762866                                33840 21 +     35859 T-GTT---TGAAT-------CC-----ACT--AG---------TAC-------------AT
i Papio_ursinus.k141_3762866                            I 2 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    111986 21 -    135482 A-ATT---TGAGT----C---T-----GCT--TA---------TGA-------------GT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 I 1
s Peromyscus_maniculatus.KI615518.1                       4946457 21 -   8017169 c-ctt---tgaat-------cc-----ACT--AA---------TGA-------------AT
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            118394 18 -    122454 ---------GAGC------G-C-----ACTATAG---------TGA-------------AT
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           1527 20 -      3310 --GTT---TGAAT-------CC-----ACT--AG---------TAC-------------AC
i Piliocolobus_badius.k141_1497351                      I 2 C 0
s Piliocolobus_gordonorum.k141_902470                       21433 20 -     82327 --GTT---TGAAT-------CC-----ACT--AG---------TAC-------------AT
i Piliocolobus_gordonorum.k141_902470                   I 2 C 0
s Piliocolobus_kirkii.k141_557609                           18185 20 +     19957 --GTT---TGAAT-------CC-----ACT--AG---------TAC-------------AT
i Piliocolobus_kirkii.k141_557609                       I 2 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26736194 20 +  26888534 --gtt---tgaat-------cc-----ACT--AG---------TAC-------------AT
i Piliocolobus_tephrosceles.PDMG02000036.1              I 2 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            93442 21 +    112873 A-ATT---GAAAT--T-----C-----ATT--AA-T--------AA-------------AT
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             40036 21 -     61926 C-ATT---TGGAT-------CC-----ACT--AA---------CAC-------------AT
i Pithecia_albicans.k141_991845                         I 1 C 0
s Pithecia_chrysocephala.k141_159118                        21465 21 +     78826 C-ATT---TGGAT-------CC-----ACT--AA---------CAC-------------AT
i Pithecia_chrysocephala.k141_159118                    I 1 C 0
s Pithecia_hirsuta.k141_1152968                              5416 21 -     15800 C-ATT---TGGAT-------CC-----ACT--AA---------CAC-------------AT
i Pithecia_hirsuta.k141_1152968                         I 1 C 0
s Pithecia_mittermeieri.k141_2119203                         8614 21 -     16101 C-ATT---TGGAT-------CC-----ACT--AA---------CAC-------------AT
i Pithecia_mittermeieri.k141_2119203                    I 1 C 0
s Pithecia_pissinattii.k141_1102319                          1923 21 +      9673 C-ATT---TGGAT-------CC-----ACT--AA---------CAC-------------AT
i Pithecia_pissinattii.k141_1102319                     I 1 C 0
s Pithecia_pithecia.tarseq_313                           13470917 21 -  19735023 C-ATT---TGGAT-------CC-----ACT--AA---------CAC-------------AT
i Pithecia_pithecia.tarseq_313                          I 1 C 0
s Pithecia_vanzolinii.k141_831006                            9825 21 -     31692 C-ATT---TGGAT-------CC-----ACT--AA---------CAC-------------AT
i Pithecia_vanzolinii.k141_831006                       I 1 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           2461 18 +     21690 ---------GAGC----C---C-----ACTATAG---------TGA-------------AT
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       19217 21 +     44506 C-ATT---TGGAT-------CC-----ACT--AA---------TAC-------------CT
i Plecturocebus_bernhardi.k141_959214                   I 1 C 0
s Plecturocebus_brunneus.k141_498086                        19435 21 +     67491 C-ATT---TGGAT-------CC-----ACT--AA---------TAC-------------CT
i Plecturocebus_brunneus.k141_498086                    I 1 C 0
s Plecturocebus_caligatus.k141_2539816                       9680 21 -     98129 C-ATT---TGGAT-------CC-----ACT--AA---------TAC-------------CT
i Plecturocebus_caligatus.k141_2539816                  I 1 C 0
s Plecturocebus_cinerascens.k141_744510                     19280 21 +    147771 C-ATT---TGGAT-------CC-----ACT--AA---------TAC-------------CT
i Plecturocebus_cinerascens.k141_744510                 I 1 C 0
s Plecturocebus_cupreus.k141_1223294                        19531 21 -     23762 C-ATT---TGGAT-------CC-----ACT--AA---------TAC-------------CT
i Plecturocebus_cupreus.k141_1223294                    I 1 C 0
s Plecturocebus_dubius.k141_2078842                         19479 21 -     19696 C-ATT---TGGAT-------CC-----ACT--AA---------TAC-------------CT
i Plecturocebus_dubius.k141_2078842                     I 1 C 0
s Plecturocebus_grovesi.k141_242819                         19353 21 +    152463 C-ATT---TGGAT-------CC-----ACT--AA---------TAC-------------CT
i Plecturocebus_grovesi.k141_242819                     I 1 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      6110 21 +      8943 C-ATT---TGGAT-------CC-----ACT--AA---------TAC-------------CT
i Plecturocebus_hoffmannsi.k141_1595076                 I 1 C 0
s Plecturocebus_miltoni.k141_841561                          9070 21 +    134592 C-ATT---TGGAT-------CC-----ACT--AA---------TAC-------------CT
i Plecturocebus_miltoni.k141_841561                     I 1 C 0
s Plecturocebus_moloch.k141_890597                          19663 21 -     75465 C-ATT---TGGAT-------CC-----ACT--AA---------TAC-------------CT
i Plecturocebus_moloch.k141_890597                      I 1 C 0
s Pongo_abelii.NDHI03003816.1                              183710 21 -    373494 c-att---tgaat-------cc-----ACT--GA---------TAC-------------AT
i Pongo_abelii.NDHI03003816.1                           I 2 C 0
s Pongo_pygmaeus.ctg62                                   19803614 21 +  19899266 C-ATT---TGAAT-------CC-----ACT--GA---------TAC-------------AT
i Pongo_pygmaeus.ctg62                                  I 2 C 0
s Presbytis_comata.k141_672698                               1764 20 -     15069 --GTT---TGAAT-------CC-----ACT--AC---------TAC-------------AT
i Presbytis_comata.k141_672698                          I 2 C 0
s Presbytis_mitrata.k141_860013                              1898 20 +     14865 --GTT---TGAAT-------CC-----ACT--AC---------TAC-------------AT
i Presbytis_mitrata.k141_860013                         I 2 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                73088 22 +     78963 C-AGG---TGAAT-------CC-----ACCA-AA---------TAA-------------AT
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6845100 21 +  12164890 c-att---tgaag-------cC-----ACT--AA---------TAA-------------AT
i Prolemur_simus.MPIZ01000048.1                         I 2 C 0
s Propithecus_coquerelli.NW_012147863.1                     13535 21 -     30946 c-att---tgaag-------cC-----ACT--AA---------TAT-------------AT
i Propithecus_coquerelli.NW_012147863.1                 I 2 C 0
s Propithecus_coronatus.k141_1353159                          241 21 +     11805 C-ATT---TGAAG-------CC-----ACT--AA---------TAA-------------AT
i Propithecus_coronatus.k141_1353159                    I 2 C 0
s Propithecus_diadema.k141_577245                           39572 21 +     52369 C-ATT---TGAAG-------CC-----ACT--AA---------TAA-------------AT
i Propithecus_diadema.k141_577245                       I 3 C 0
s Propithecus_edwardsi.k141_1317105                         31960 21 -     44753 C-ATT---TGAAG-------CC-----ACT--AA---------TAA-------------AT
i Propithecus_edwardsi.k141_1317105                     I 2 C 0
s Propithecus_perrieri.k141_7554                            13882 21 +     27322 C-ATT---TGAAG-------CC-----ACT--AA---------TAA-------------AT
i Propithecus_perrieri.k141_7554                        I 2 C 0
s Propithecus_tattersalli.k141_907138                       13524 21 -     53241 C-ATT---TGAAG-------CC-----ACT--AA---------TAT-------------AT
i Propithecus_tattersalli.k141_907138                   I 2 C 0
s Propithecus_verreauxi.k141_158021                         35796 21 -     48185 C-ATT---TGAAG-------CC-----ACT--AA---------TAT-------------AT
i Propithecus_verreauxi.k141_158021                     I 2 C 0
s Psammomys_obesus.NESX01026517.1                           29298 20 +     77221 c--tt---taaat-------ct-----act--aa---------taa-------------at
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            1004 21 -     27784 A-ATA---TGAGT--T-----C-----ACT--AA---------TGA-------------AG
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        242519 21 -    344369 A-ATT---TGAGT----C---T-----GCT--AA---------TAA-------------GT
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13243131 21 -  17261082 A-ATT---AGAGT--T-----C-----ACT--AA---------TAG-------------AT
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             601085 21 -   3946241 A-ATT---AGAGT--T-----C-----ACT--AA---------TAG-------------AT
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131530851 21 - 161321710 A-ATT---TGAGT----C---T-----GCT--TA---------TGA-------------GT
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             25888 20 +     56732 --GTT---TGAAC-------CC-----ACT--AG---------TAC-------------AT
i Pygathrix_cinerea.k141_374971                         I 2 C 0
s Pygathrix_nigripes_b.ctg79                                 6802378 20 +   6970761 --GTT---TGAAC-------CC-----ACT--AG---------TAC-------------AT
i Pygathrix_nigripes_b.ctg79                               I 2 C 0
s Pygathrix_nigripes_a.k141_101123                             1770 20 +     18040 --GTT---TGAAC-------CC-----ACT--AG---------TAC-------------AT
i Pygathrix_nigripes_a.k141_101123                        I 2 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                12962 18 +     68503 ---------GAGC----C---C-----ACTACAA---------TAA-------------AT
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13911241 21 +  90463843 c-tct---cgaAT-------CA-----ACT--TA---------TAA-------------GT
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1784732 22 +   2252614 aaatt---tgagt------c-t-----gct--aa---------taa-------------at
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           12326 20 -     14454 --GTT---TGAAC-------CC-----ACT--AG---------TAC-------------AT
i Rhinopithecus_bieti.k119_102124                       I 2 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206373652 20 - 206558726 --gtt---tgaac-------cC-----ACT--AG---------TAC-------------AT
i Rhinopithecus_roxellana.NC_044549.1                   I 2 C 0
s Rhinopithecus_strykeri.ctg4                            44851300 20 -  45163003 --GTT---TGAAC-------CC-----ACT--AG---------TAC-------------AT
i Rhinopithecus_strykeri.ctg4                           I 2 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                16434 21 +    109198 A-ATT---AGAGT----C---C-----ACT--AA---------TAG-------------AT
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       4740 18 +     12214 ---------GAGC----C---C-----ACTACAA---------TAA-------------AT
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15669088 21 -  43202129 C-ATT---TGGAT-------CC-----ACT--AA---------TAC-------------AT
i Saimiri_boliviensis.NW_024100938.1                    I 1 C 0
s Saimiri_cassiquiarensis.k141_808270                         963 21 +     34089 C-ATT---TGGAT-------CC-----ACT--AA---------TAC-------------AT
i Saimiri_cassiquiarensis.k141_808270                   I 1 C 0
s Saimiri_macrodon.k141_2087127                               894 21 -     60842 C-ATT---TGGAT-------CC-----ACT--AA---------TAC-------------AT
i Saimiri_macrodon.k141_2087127                         I 1 C 0
s Saimiri_oerstedii.k141_841116                               963 21 +     67014 C-ATT---TGGAT-------CC-----ACT--AA---------TAC-------------AT
i Saimiri_oerstedii.k141_841116                         I 1 C 0
s Saimiri_sciureus.k141_1947592                               963 21 +     60816 C-ATT---TGGAT-------CC-----ACT--AA---------TAC-------------AT
i Saimiri_sciureus.k141_1947592                         I 1 C 0
s Saimiri_ustus.k141_1282476                                  891 21 -     76454 C-ATT---TGGAT-------CC-----ACT--AA---------TAC-------------AT
i Saimiri_ustus.k141_1282476                            I 1 C 0
s Sapajus_apella.ctg10                                   17337471 21 -  30362882 C-ATT---TGGAT-------CC-----ACT--AA---------TAC-------------AT
i Sapajus_apella.ctg10                                  I 1 C 0
s Sapajus_macrocephalus.k141_966464                         17072 21 -     62485 C-ATT---TGGAT-------CC-----ACT--AA---------TAC-------------AT
i Sapajus_macrocephalus.k141_966464                     I 1 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   28489 21 -    114521 A-ATT---TGAAT----C---C-----ACT--AA---------TAA-------------AT
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1527475                       24313 20 +     26421 --GTT---TGAAT-------CC-----ACT--AG---------TAC-------------AT
i Semnopithecus_entellus.k141_1527475                   I 2 C 0
s Semnopithecus_hypoleucos.k141_761524                       4774 20 +     20762 --GTT---TGAAT-------CC-----ACT--AG---------TAC-------------AT
i Semnopithecus_hypoleucos.k141_761524                  I 2 C 0
s Semnopithecus_johnii.k141_1351450                         38508 20 +     40653 --GTT---TGAAT-------CC-----ACT--AG---------TAC-------------AT
i Semnopithecus_johnii.k141_1351450                     I 3 C 0
s Semnopithecus_priam.k141_198153                            9066 20 -     12194 --GTT---TGAAT-------CC-----ACT--AG---------TAC-------------AT
i Semnopithecus_priam.k141_198153                       I 2 C 0
s Semnopithecus_schistaceus.k141_653647                     22486 20 -     27512 --GTT---TGAAT-------CC-----ACT--AG---------TAC-------------AT
i Semnopithecus_schistaceus.k141_653647                 I 2 C 0
s Semnopithecus_vetulus.k141_642050                         31507 20 -     33692 --GTT---TGAAT-------CC-----ACT--AG---------TAC-------------AT
i Semnopithecus_vetulus.k141_642050                     I 2 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   94531 21 -    120886 C-ATT---TCAAT-------CC-----ATT--AA---------CAA-------------AT
i Sigmodon_hispidus.SigHis_scaffold_11332               I 1 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            14735 20 +    739146 C-ATT---TGAAT--------C-----ACT--GA---------TAA-------------AT
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2236501 18 +   2842873 T-ATT---TGAAT-------CC-----AAA--AA---------TA----------------
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             231517 21 -    276980 A-ATT---TGAGT----C---T-----GAT--AA---------TAA-------------TT
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            24098 21 +     62062 A-ATT---TGAGT----C---T-----ACT--TT---------GGA-------------GT
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189269032 18 + 218635234 ---------AAGC----C---C-----ACAATAG---------TGA-------------AT
i Sus_scrofa.CM000824.4                                 C 0 I 1
s Symphalangus_syndactylus.tarseq_24                     13898436 42 +  13920577 C-ATT---TGAATAATACATCCTTGAAACC--AAATGAATTTTTAA-------------AT
i Symphalangus_syndactylus.tarseq_24                    I 2 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               2937 21 -      6213 C-ATT---TGAGT--T-----C-----ACT--AA---------TAA-------------AT
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               11874 21 +     45698 C-ATT---TCAAT-------CA-----ACT--AA---------TGA-------------AT
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      803879 21 +   1148477 A-ATT---TGAGT--T-----T-----GCT--CA---------TAA-------------AG
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  54541 21 +     99546 A-ATT---TGAGT--T-----T-----GCT--AA---------TAA-------------AT
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               23226 21 +     42269 C-ATT---TGAAG-------CC-----ACT--AA---------CAA-------------AT
i Tarsius_lariang.k141_609102                           I 2 C 0
s Tarsius_wallacei.k141_48636                               56540 21 +     65473 C-ATT---TGAAG-------CC-----ACT--AA---------CAA-------------AT
i Tarsius_wallacei.k141_48636                           I 2 C 0
s Theropithecus_gelada.CM009951.1                       194003807 21 - 194193292 g-gtt---tgaat-------CC-----ACT--AG---------TAC-------------AT
i Theropithecus_gelada.CM009951.1                       I 2 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                   731 18 +      6782 C-TTT---AGAAT-------CC-----ACT--AA---------TA----------------
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  133020 21 -    259118 A-ATA---TGAAT--T-----C-----ACT--AA---------TTA-------------AG
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        22884 20 +     38948 --GTT---TGAAT-------CC-----ACT--AG---------TAC-------------AT
i Trachypithecus_auratus.k141_738098                    I 2 C 0
s Trachypithecus_crepusculus.k141_1588528                   16611 20 -     32910 --GTT---TGAAT-------CC-----ACT--AG---------TAC-------------AT
i Trachypithecus_crepusculus.k141_1588528               I 2 C 0
s Trachypithecus_cristatus.k141_27198                       22509 20 +     24652 --GTT---TGAAT-------CC-----ACT--AG---------TAC-------------AT
i Trachypithecus_cristatus.k141_27198                   I 2 C 0
s Trachypithecus_francoisi.k141_1178450                      1394 20 -      3559 --GTT---TGAAT-------CC-----ACT--AG---------TAC-------------AT
i Trachypithecus_francoisi.k141_1178450                 I 2 C 0
s Trachypithecus_geei.k141_670367                           39333 20 -     54611 --GTT---TGAAT-------CC-----ACT--AG---------TAC-------------AT
i Trachypithecus_geei.k141_670367                       I 2 C 0
s Trachypithecus_germaini.k141_809503                       15332 20 +     17312 --GTT---TGAAT-------CC-----ACT--AG---------TAC-------------AT
i Trachypithecus_germaini.k141_809503                   I 2 C 0
s Trachypithecus_hatinhensis.k141_357672                    22702 20 -     25040 --GTT---TGAAT-------CC-----ACT--AG---------TAC-------------AT
i Trachypithecus_hatinhensis.k141_357672                I 2 C 0
s Trachypithecus_laotum.k141_171445                          1368 20 +      3528 --GTT---TGAAT-------CC-----ACT--AG---------TAC-------------AT
i Trachypithecus_laotum.k141_171445                     I 2 C 0
s Trachypithecus_leucocephalus.k141_283605                  47730 20 +     51589 --GTT---TGAAT-------CC-----ACT--AG---------TAC-------------AT
i Trachypithecus_leucocephalus.k141_283605              I 2 C 0
s Trachypithecus_melamera.k141_238507                       10898 20 +     14732 --GTT---TGAAT-------CC-----ACT--AG---------TAC-------------AT
i Trachypithecus_melamera.k141_238507                   I 2 C 0
s Trachypithecus_obscurus.k141_1115109                       1376 20 -     28054 --GTT---TGAAT-------CC-----ACT--AG---------TAC-------------AT
i Trachypithecus_obscurus.k141_1115109                  I 2 C 0
s Trachypithecus_phayrei.ctg3                            44656171 20 -  44834318 --GTT---TGAAT-------CC-----ACT--AG---------TAC-------------AT
i Trachypithecus_phayrei.ctg3                           I 2 C 0
s Trachypithecus_pileatus.k141_469329                        1181 20 +      3372 --GTT---TGAAT-------CC-----ACT--AG---------TAC-------------AT
i Trachypithecus_pileatus.k141_469329                   I 2 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   2377 18 +     90398 ---------GAGC----C---C-----ACTATAA---------TAA-------------GT
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16078470 21 +  31416278 C-AAT---TGAAA-------CC-----ACT--AA---------TGA-------------AT
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2788290 34 -   3938065 C-ATT---TGAAT-------CC-----ACT--AT---------TAATTAAttacacataat
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                     851 34 +     13056 C-ATT---TGAAT-------CC-----ACT--AT---------TAATTAATTACACATAAT
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69310495 18 -  96451834 ---------GAGC------G-C-----ACTATAG---------TGA-------------AT
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 23694 21 -     25548 A-ATT---TTAAC----C---T-----AAT--AA---------TGG-------------AT
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6511107 21 +  28682327 A-ATC---TGAGT----C---T-----GCT--AA---------TAA-------------GC
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  2039 21 -     20643 C-ATT---TGAAG-------CC-----ACT--AA---------TAA-------------AT
i Varecia_rubra.k141_432109                             I 2 C 0
s Varecia_variegata.k141_775891                             21584 21 -     33872 C-ATT---TGAAG-------CC-----ACT--AA---------TAA-------------AT
i Varecia_variegata.k141_775891                         I 2 C 0
s Vicugna_pacos.KN269600.1                                1521814 18 -   2331223 ---------GAGC----C---C-----AGTAGAG---------TAA-------------GT
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                134261 21 -    281493 A-ATT---TGAGT----C---T-----GCT--AA---------TAA-------------GT
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       123588 21 -    134049 T-ATT---TGAAT-------CC-----TAT--AA---------TAA-------------AA
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        210785 21 -    227762 C-ATT---TAAGT----C---T-----GCT--CC---------TAA-------------GG
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           3998 18 -      8775 ---------GAGC----C---C-----ACTATAG---------TAA-------------AT
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Perognathus_longimembris.PerPac_flattened_line_22291      39705  3 -     45160 I
e Dipodomys_stephensi.DipSte_scaffold_44365                 23717  3 +     28912 I
e Dipodomys_ordii.KN672545.1                              3652163  3 +   4240102 I
e Megaderma_lyra.MegLyr_scaffold_3562                       61508  0 -    234502 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16291  1 -    119109 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     12283  2 -     20485 I
e Jaculus_jaculus.JH725517.1                              8561873  2 +  11848649 I
e Allactaga_bullata.AllBul_scaffold_70162                    8911  2 -     22067 I
e Perodicticus_potto.k141_713187                            21218  0 -     27972 C
e Perodicticus_ibeanus.k141_117958                           1921  0 -     23713 C
e Nannospalax_galili.KL201303.1                            107449  0 +    362372 C
e Dolichotis_patagonum.DolPat_scaffold_14102                33375  0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             56104 16 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                14631 16 +     26546 I
e Cricetulus_griseus.LT883672.1                          53025429  0 +  72327488 C
e Cavia_tschudii.CavTsc_scaffold_488                       173989  0 +    436027 C
e Cavia_porcellus.DS562889.1                             15795798  0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15783848 16 -  24422027 I

a score=0.000000
s hg38.chr4_GL000008v2_random                                8442 1 +    209709 G
s Acinonyx_jubatus.LLWD01000356.1                         2030532 1 +   3721120 T
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    108794 1 -    189883 A
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10653853 1 +  23371972 T
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7090554 1 -  16596857 T
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allenopithecus_nigroviridis.k141_3103707                  59466 1 +     61638 G
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        51274 1 +     53391 G
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         1998 1 +     72529 G
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          1574 1 +      3797 G
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             6664 1 -     18050 G
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  7781 1 -     11521 G
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              7339 1 -     21359 G
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1856473                                5722 1 +      7227 G
i Alouatta_juara.k141_1856473                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          6636 1 -     10438 G
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            3291 1 +      7047 G
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             6575 1 +     10410 G
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1374428                             378 1 -     25526 G
i Alouatta_puruensis.k141_1374428                       C 0 C 0
s Alouatta_seniculus.k141_990213                             3296 1 +      6429 G
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3517301 1 +   4113121 G
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      387487 1 -    631301 G
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            27934 1 +     33004 G
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 58970 1 +     78111 G
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            1901 1 +     22701 G
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5745861 1 +   9889416 G
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             2453 1 -    104377 G
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               2453 1 +     23246 G
i Aotus_vociferans.k141_718647                          C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      14600 1 +     17483 G
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 5588 1 -     29036 G
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9535714 1 +  39197703 G
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             57002 1 +     85812 G
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 7999 1 +     89302 G
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             12508 1 -     58268 G
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             60496 1 +    119057 G
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               2446 1 -     25888 G
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 3311 1 -     16375 G
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_767228                               9283 1 -      9688 G
i Avahi_peyrierasi.k141_767228                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26377237 1 +  51448160 G
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        2468 1 -     13118 G
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   40401 1 -     72089 G
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6556548 1 +   6870073 G
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138136779 1 - 161108492 G
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     569157 1 -    998990 G
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136292512 1 - 158972876 G
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1228133 1 -   1914593 G
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               110344 1 -    171031 G
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                  9370 1 +    125063 G
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                11418 1 -    216513 G
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        3957 1 -    134917 G
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3216270 1 -   8989139 G
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           394454 1 -  15254737 G
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2970191 1 +   6889770 G
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11515237 1 +  39901454 T
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   10254 1 +     87036 T
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11261896 1 -  35597290 T
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11084425 1 +  39895921 T
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16451459 1 -  44759192 T
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21322408 1 + 157394656 G
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135703635 1 - 157403528 G
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_647363                  1156 1 +      1887 G
i Capromys_pilorides.CapPil_scaffold_647363             C 0 C 0
s Carlito_syrichta.NW_007248099.1                          305757 1 +    345090 G
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               56665 1 +     67245 G
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   27171 1 +     33760 G
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   155977 1 -    276539 A
i Catagonus_wagneri.CatWag_scaffold_1305                I 1 C 0
s Cebus_albifrons.Contig22                               18887183 1 -  29618158 G
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 4729 1 -     26817 G
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                 8969 1 +     25043 G
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         4806 1 +     21754 G
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4360451 1 +   7569818 T
i Ceratotherium_simum.JH767818.1                        C 0 I 4
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623          206 1 -      9338 T
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 I 4
s Cercocebus_atys.KQ010443.1                              6551261 1 +   6739814 G
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      52738 1 -     54931 G
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         17722 1 -     19697 G
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         55253 1 -    107033 G
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        1696 1 -      3853 G
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          25628 1 +     30494 G
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           1652 1 -      4022 G
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          1545 1 -      3505 G
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           20349 1 +     35983 G
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11986871 1 +  12117833 G
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46473624 1 +  46592721 G
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      31451 1 +     33420 G
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        1487 1 -      3443 G
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      2478 1 -      4669 G
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        2278 1 -      4411 G
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         1803 1 -      4205 G
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           55648 1 -     68416 G
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            4697 1 +     13308 G
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             1982 1 -     18223 G
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             19005 1 +     25473 G
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           38044 1 +     57117 G
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          42719 1 +     54541 G
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15958534 1 +  43084221 G
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         67565 1 +    196370 G
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          11740 1 +     40510 G
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15135084 1 -  15256731 G
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      30130 1 -     53260 G
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101140579 1 + 101219884 G
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                13645 1 -     21363 A
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           758951 1 +    964067 A
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_141308              5679 1 -     12508 N
i Chrysochloris_asiatica.ChrAsi_scaffold_141308         C 0 I 150
s Colobus_angolensis.KN985967.1                          10879158 1 +  10971483 G
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147660316 1 + 156195979 G
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            12302 1 +     23629 G
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60609914 1 +  78930452 T
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         36372 1 -     40477 G
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 274239 1 -    399297 A
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             15897 1 -     19186 A
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 I 17
s Cryptoprocta_ferox.CryFer_flattened_line_19014            48559 1 -     70449 T
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  204972 1 -    956709 A
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 27224 1 -     67205 G
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16841519 1 +  31942871 G
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80033977 1 -  96802777 G
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18695976 1 -  18957592 g
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 319108 1 +    993696 T
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_170113                  371 1 +       818 T
i Diceros_bicornis.DicBicMic_scaffold_170113            C 0 I 4
s Eidolon_helvum.KE772537.1                                  9359 1 +     24177 G
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1488671 1 +   1727528 G
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7803408 1 +  15467074 G
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        235883 1 -    369425 a
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           2892 1 -      7838 a
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85868275 1 +  99434291 T
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Equus_asinus.JREZ01000062.1                             5849838 1 -   7175178 a
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13348341 1 +  41866177 a
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                           9831 1 +     92910 a
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11529431 1 +  16010500 g
i Erinaceus_europaeus.JH835290.1                        C 0 I 1
s Erythrocebus_patas.Contig8                             48767263 1 -  48907691 G
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          312121 1 +    330699 G
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             58550 1 +     89355 G
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              1718 1 +     13586 G
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               1654 1 -      6809 G
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             8126 1 +     36558 G
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             4442 1 +     60246 G
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 7930 1 +    109717 G
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               12304 1 +     16540 G
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                12581 1 +     27497 G
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           15042 1 +     26808 G
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                29770 1 +     46535 G
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              12493 1 -     29447 G
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129889512 1 - 159252932 T
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129276586 1 - 158578461 T
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 17721 1 +     52776 T
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13889717 1 -  19261668 G
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     207663 1 -    847004 G
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           10043 1 -     43889 G
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           7092 1 +     27357 G
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               152976 1 +    324696 G
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    178184 1 -    189561 G
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                            9380 1 -     18683 G
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               1837 1 -     14630 G
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119648935 1 - 195582420 G
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   73932 1 +    118900 G
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                         2264 1 +      3980 G
i Hapalemur_alaotrensis.k141_1198205                    C 0 I 1
s Hapalemur_gilberti.k141_97962                             24744 1 +     26611 G
i Hapalemur_gilberti.k141_97962                         C 0 I 1
s Hapalemur_griseus.k141_1387522                             2198 1 +     56096 G
i Hapalemur_griseus.k141_1387522                        C 0 I 1
s Hapalemur_meridionalis.k141_186231                        25471 1 -     42470 G
i Hapalemur_meridionalis.k141_186231                    C 0 I 1
s Hapalemur_occidentalis.k141_797938                        42068 1 -     54384 G
i Hapalemur_occidentalis.k141_797938                    C 0 I 1
s Helogale_parvula.HelPar_flattened_line_22962              13762 1 +     53719 T
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                24670 1 -     91191 G
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2547828 1 +  31725842 T
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               53246 1 +     73687 G
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              144244 1 +    277961 G
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 I 1
s Hipposideros_armiger.JXIK01001085.1                      275670 1 -    477199 G
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              4824 1 -      9143 G
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg649                                    98507 1 +    115816 G
i Hoolock_leuconedys.ctg649                                C 0 I 25
s Hyaena_hyaena.HyaHya_flattened_line_20729                 12831 1 -     67322 T
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hylobates_abbotti.k141_493872                              1644 1 +      5897 G
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_282275                                858 1 +      1846 G
i Hylobates_agilis.k141_282275                          C 0 C 0
s Hylobates_klossii.k141_584463                                21 1 -      1009 G
i Hylobates_klossii.k141_584463                         C 0 C 0
s Hylobates_muelleri.k141_1133650                            1079 1 -      2775 G
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             29681 1 -     60944 G
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     2800 1 +     22540 G
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Indri_indri.k141_3334527                                   8709 1 +      9207 G
i Indri_indri.k141_3334527                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               5904 1 +     17520 G
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               20736 1 +     37189 G
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          46557 1 -    147782 G
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   110853 1 -    115756 T
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258403747 1 - 285822530 G
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        20645 1 +     39228 G
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            50019 1 +     63517 G
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        75241 1 +    116806 G
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     28282 1 -     33031 G
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3082521 1 -   3498232 T
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                     9744 1 +     22452 A
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            133079 1 +   3060487 G
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19244348 1 +  19376315 G
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            7388 1 +     84689 G
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3775139 1 +   6799190 G
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20587819 1 -  62548349 G
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11083881 1 +  39895028 T
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             16033 1 +     74745 G
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12702539 1 +  12821369 G
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               4635 1 +      6569 G
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           42936 1 +     63263 G
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_1068107                               11512 1 +     12679 G
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                1085 1 +      3017 G
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  42697 1 -     79256 G
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196031615 1 + 196197964 G
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11441721 1 +  11645122 G
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   1644 1 -     46448 G
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                1474 1 -      3617 G
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 11807 1 -     55006 G
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43836844 1 +  43892939 G
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                4067 1 -      5978 G
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               1649 1 -     27140 G
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43433509 1 -  43563597 G
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4446335 1 -   4543643 G
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            143149 1 +    252755 T
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             33213 1 +     58827 T
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_1828            225773 1 -    226874 T
i Mellivora_capensis.MelCap_flattened_line_1828         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233                8250 1 +     15977 A
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1043147 1 -  26018355 A
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_183284                    775 1 +      2166 G
i Mesoplodon_bidens.MesBid_scaffold_183284              C 0 C 0
s Microcebus_murinus.CM007691.1                          16506864 1 +  47401472 G
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               19825 1 -     32043 G
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22816031 1 -  98408828 a
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8206546 1 +  10048721 G
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            31227 1 +     45743 G
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        32182 1 +     34273 G
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         7819 1 -    104932 T
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     2277 1 +      8497 G
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 143502 1 +    154973 G
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                158358 1 +    265003 G
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 1769 1 -      4346 G
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  141452 1 -    168139 T
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          16363 1 -    100666 G
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70761897 1 +  92629107 G
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75485021 1 +  98207768 G
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67549337 1 +  89017189 G
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74324440 1 +  97876770 G
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              7892 1 +     98495 G
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4420668 1 -  28371801 T
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     86847 1 -    117718 G
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               964690 1 +   8389877 G
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5016367 1 +   6462685 G
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3462276 1 -   3747815 G
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         7473 1 +     66751 G
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             2218 1 -      8794 A
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nasalis_larvatus.k141_153429                               4546 1 +     48152 G
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4481420 1 -  14209539 T
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3948111 1 -   4490290 G
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  46477 1 +     94413 G
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1223136                          10313 1 -     11253 G
i Nomascus_annamensis.k141_1223136                      C 0 C 0
s Nomascus_concolor.k141_468488                               956 1 -      1482 G
i Nomascus_concolor.k141_468488                         C 0 C 0
s Nomascus_gabriellae.k141_906566                             945 1 -      2544 G
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             21419 1 -  18771707 G
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_844529                                   693 1 +      2124 G
i Nomascus_siki_a.k141_844529                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                26877 1 +   3668941 T
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65563718 1 -  95554990 G
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                             563 1 +      6470 G
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65666087 1 +  89412551 G
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4992406 1 -  23139505 G
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3675579 1 +  10294119 t
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             676078 1 -   3126709 T
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1076894 1 +   1425656 G
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         34056 1 +     78940 G
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  121362 1 +    145789 A
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  33303 1 +     62360 G
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7221795 1 -   7562323 G
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              40163 1 -     66828 c
i Orycteropus_afer.OryAfe_flattened_line_13509          I 110 I 99
s Oryctolagus_cuniculus.CM000803.1                      141872393 1 + 163896628 a
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      304212 1 -    505867 T
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       35731 1 +     38679 G
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18005172 1 -  38779656 g
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134074472 1 - 275406953 G
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      75686 1 +    140051 G
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127571177 1 - 205426864 G
i Pan_paniscus.CM003386.1                               I 22 C 0
s Pan_troglodytes.CM009241.2                            120148324 1 - 196562556 G
i Pan_troglodytes.CM009241.2                            I 22 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  30675 1 +    295523 T
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3634279 1 +  18214204 T
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5024056 1 -   6340057 T
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1063330 1 -   1292953 G
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188152293 1 - 188283584 G
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            48505 1 +     76494 G
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47509690 1 +  47705337 G
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 63672 1 -    104429 G
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  13458 1 -     29451 G
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                33861 1 +     35859 G
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    112008 1 -    135482 T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 I 1 C 0
s Peromyscus_maniculatus.KI615518.1                       4946478 1 -   8017169 G
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            118412 1 -    122454 G
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           1547 1 -      3310 G
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       21453 1 -     82327 G
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           18205 1 +     19957 G
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26736214 1 +  26888534 G
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            93463 1 +    112873 G
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             40057 1 -     61926 G
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        21486 1 +     78826 G
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              5437 1 -     15800 G
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                         8635 1 -     16101 G
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          1944 1 +      9673 G
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13470938 1 -  19735023 G
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                            9846 1 -     31692 G
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           2479 1 +     21690 G
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       19238 1 +     44506 G
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        19456 1 +     67491 G
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                       9701 1 -     98129 G
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     19301 1 +    147771 G
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        19552 1 -     23762 G
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_2078842                         19500 1 -     19696 G
i Plecturocebus_dubius.k141_2078842                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         19374 1 +    152463 G
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      6131 1 +      8943 G
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                          9091 1 +    134592 G
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          19684 1 -     75465 G
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              183731 1 -    373494 G
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19803635 1 +  19899266 G
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               1784 1 -     15069 G
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              1918 1 +     14865 G
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                73110 1 +     78963 G
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6845121 1 +  12164890 G
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     13556 1 -     30946 G
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                          262 1 +     11805 G
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           39593 1 +     52369 G
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         31981 1 -     44753 G
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            13903 1 +     27322 G
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       13545 1 -     53241 G
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         35817 1 -     48185 G
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           29318 1 +     77221 a
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            1025 1 -     27784 G
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        242540 1 -    344369 T
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13243152 1 -  17261082 G
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             601106 1 -   3946241 G
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131530872 1 - 161321710 T
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             25908 1 +     56732 G
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6802398 1 +   6970761 G
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             1790 1 +     18040 G
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                12980 1 +     68503 G
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13911262 1 +  90463843 G
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1784754 1 +   2252614 g
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           12346 1 -     14454 G
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206373672 1 - 206558726 G
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44851320 1 -  45163003 G
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                16455 1 +    109198 G
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       4758 1 +     12214 G
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15669109 1 -  43202129 G
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                         984 1 +     34089 G
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                               915 1 -     60842 G
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                               984 1 +     67014 G
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                               984 1 +     60816 G
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                  912 1 -     76454 G
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17337492 1 -  30362882 G
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         17093 1 -     62485 G
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   28510 1 -    114521 G
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1527475                       24333 1 +     26421 G
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       4794 1 +     20762 G
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         38528 1 +     40653 G
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                            9086 1 -     12194 G
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     22506 1 -     27512 G
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         31527 1 -     33692 G
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   94552 1 -    120886 A
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            14755 1 +    739146 G
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             231538 1 -    276980 T
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            24119 1 +     62062 T
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189269051 1 + 218635234 C
i Sus_scrofa.CM000824.4                                 I 1 C 0
s Symphalangus_syndactylus.tarseq_24                     13898478 1 +  13920577 G
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               2958 1 -      6213 G
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               11895 1 +     45698 A
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      803900 1 +   1148477 T
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  54562 1 +     99546 T
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               23247 1 +     42269 G
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               56561 1 +     65473 G
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194003828 1 - 194193292 G
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  133041 1 -    259118 G
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 I 1
s Trachypithecus_auratus.k141_738098                        22904 1 +     38948 G
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   16631 1 -     32910 G
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       22529 1 +     24652 G
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      1414 1 -      3559 G
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           39353 1 -     54611 G
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       15352 1 +     17312 G
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    22722 1 -     25040 G
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          1388 1 +      3528 G
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  47750 1 +     51589 G
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       10918 1 +     14732 G
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       1396 1 -     28054 G
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44656191 1 -  44834318 G
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        1201 1 +      3372 G
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   2395 1 +     90398 G
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16078491 1 +  31416278 G
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2788324 1 -   3938065 a
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                     885 1 +     13056 A
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69310513 1 -  96451834 G
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 23715 1 -     25548 A
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6511128 1 +  28682327 T
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  2060 1 -     20643 G
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             21605 1 -     33872 G
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1521832 1 -   2331223 G
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                134282 1 -    281493 T
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       123609 1 -    134049 G
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        210806 1 -    227762 T
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           4016 1 -      8775 G
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Chaetophractus_vellerosus.ChaVel_scaffold_1070855            24 0 -      1715 C
e Aplodontia_rufa.AprRuf_scaffold_156013                      473 0 +      5067 C
e Perognathus_longimembris.PerPac_flattened_line_22291      39705 3 -     45160 I
e Dipodomys_stephensi.DipSte_scaffold_44365                 23717 3 +     28912 I
e Dipodomys_ordii.KN672545.1                              3652163 3 +   4240102 I
e Tolypeutes_matacus.TolMat_scaffold_269431                   749 0 +      6782 C
e Microgale_talazaci.MicTal_scaffold_34660                  28194 2 -     48017 I
e Megaderma_lyra.MegLyr_scaffold_3562                       61508 0 -    234502 C
e Echinops_telfairi.JH980316.1                           22991248 2 -  44670279 I
e Dasypus_novemcinctus.JH568778.1                          178829 0 -   6883506 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16291 1 -    119109 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     12283 2 -     20485 I
e Jaculus_jaculus.JH725517.1                              8561873 2 +  11848649 I
e Allactaga_bullata.AllBul_scaffold_70162                    8911 2 -     22067 I
e Spermophilus_dauricus.KZ294190.1                        2236519 0 +   2842873 C
e Perodicticus_potto.k141_713187                            21218 0 -     27972 C
e Perodicticus_ibeanus.k141_117958                           1921 0 -     23713 C
e Nannospalax_galili.KL201303.1                            107449 0 +    362372 C
e Marmota_marmota.CZRN01000005.1                         36870442 0 +  64221397 C
e Ictidomys_tridecemlineatus.JH393315.1                   7122595 0 +  13083262 C
e Dolichotis_patagonum.DolPat_scaffold_14102                33375 0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             56104 16 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                14631 16 +     26546 I
e Cricetulus_griseus.LT883672.1                          53025429 0 +  72327488 C
e Cavia_tschudii.CavTsc_scaffold_488                       173989 0 +    436027 C
e Cavia_porcellus.DS562889.1                             15795798 0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15783848 16 -  24422027 I

a score=0.000000
s hg38.chr4_GL000008v2_random                                8443 25 +    209709 A----A-GA--GGAT--GA--------TTC---TACCA---TAC-------C------AAT
s Acinonyx_jubatus.LLWD01000356.1                         2030533 17 +   3721120 A----A-CA--GGAT--AA--------TTC---TCTT------------------------
i Acinonyx_jubatus.LLWD01000356.1                       C 0 I 9
s Acomys_cahirinus.AcoCah_scaffold_1625                    108795 26 -    189883 A----A-AA--TGAT--AA--------TTTT--CCTGA---TAC-------C------AGC
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10653854 17 +  23371972 A----A-CC--AGAC--AA--------CTC---TCTT------------------------
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 I 9
s Ailurus_fulgens.LNAC01000003.1                          7090555 17 -  16596857 A----A-CA--GAAC--AA--------TTC---TCTT------------------------
i Ailurus_fulgens.LNAC01000003.1                        C 0 I 9
s Allenopithecus_nigroviridis.k141_3103707                  59467 25 +     61638 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        51275 25 +     53391 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         1999 25 +     72529 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          1575 25 +      3797 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             6665 25 -     18050 A----A-GA--GGAT--GA--------TTC---TCTCA---TAC-------C------AGT
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  7782 25 -     11521 A----A-GA--GGAT--GA--------TTC---TCTCA---TAC-------C------AGT
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              7340 25 -     21359 A----A-GA--GGAT--GA--------TTC---TCTCA---TAC-------C------AGT
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1856473                                5723 25 +      7227 A----A-GA--GGAT--GA--------TTC---TCTCA---TAC-------C------AGT
i Alouatta_juara.k141_1856473                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          6637 25 -     10438 A----A-GA--GGAT--GA--------TTC---TCTCA---TAC-------C------AGT
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            3292 25 +      7047 A----A-GA--GGAT--GA--------TTC---TCTCA---TAC-------C------AGT
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             6576 25 +     10410 A----A-GA--GGAT--GA--------TTC---TCTCA---TAC-------C------AGT
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1374428                             379 25 -     25526 A----A-GA--GGAT--GA--------TTC---TCTCA---TAC-------C------AGT
i Alouatta_puruensis.k141_1374428                       C 0 C 0
s Alouatta_seniculus.k141_990213                             3297 25 +      6429 A----A-GA--GGAT--GA--------TTC---TCTCA---TAC-------C------AGT
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3517302 23 +   4113121 A----G-GA--AGAC--AA--------TTC---TTTCA---CAC-------C------A--
i Ammotragus_lervia.NIVO01013474.1                      C 0 I 4
s Anoura_caudifer.AnoCau_scaffold_422                      387488 27 -    631301 A----A-GG--ACAC--AA--------TTA---TCTCA---TACT---AGTC------A--
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            27935 23 +     33004 A----G-GA--GGAC--AA--------TTC---TTTCA---CAC-------C------A--
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 I 4
s Aotus_azarae.k141_3170768                                 58971 25 +     78111 A----A-GA--GGAT--GA--------TTC---CCTCA---TAC-------C------AGT
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            1902 25 +     22701 A----A-GA--GGAT--GA--------TTC---CCTCA---TAC-------C------AGT
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5745862 25 +   9889416 A----A-GA--GGAT--GA--------TTC---CCTCA---TAC-------C------AGT
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             2454 25 -    104377 A----A-GA--GGAT--GA--------TTC---CCTCA---TAC-------C------AGT
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               2454 25 +     23246 A----A-GA--GGAT--GA--------TTC---CCTCA---TAC-------C------AGT
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                      473 25 +      5067 A----A-GT--GGAA--AA--------TTC---TCTAA---AAC-------C------AGT
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      14601 26 +     17483 A----A-GA--GAAA--AA-------ATAC---TCTCA---TAC-------C------AAT
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 5589 27 -     29036 C----A-GA--ACAC--AA--------TTC---TCTCA---TACT---AGTC------A--
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9535715 25 +  39197703 A----A-GA--GGAT--GA--------TTC---TCTCA---TAC-------C------AGT
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             57003 25 +     85812 A----A-GA--GGAT--GA--------TTC---TCTCA---TAC-------C------AGT
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 8000 25 +     89302 A----A-GA--GGAT--GA--------TTC---TCTCA---TAC-------C------AGT
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             12509 25 -     58268 A----A-GA--GGAT--GA--------TTC---TCTCA---TAC-------C------AGT
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             60497 25 +    119057 A----A-GA--GGAT--GA--------TTC---TCTCA---TAC-------C------AGT
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               2447 25 -     25888 A----A-GA--GGAT--GA--------TTC---TCTCA---TAC-------C------AGT
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 3312 25 -     16375 A----A-GA--GAAC--AA--------TTC---TCTCA---TAC-------C------AGT
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_767228                               9284 25 -      9688 A----A-GA--GAAC--AA--------TTC---TCTCA---TAC-------C------AGT
i Avahi_peyrierasi.k141_767228                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26377238 27 +  51448160 A----G-GA--GGAC--AA--------TTC---TTTCA---TAC-------CAG-T-CA--
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        2469 27 -     13118 A----G-GA--GGAC--AA--------TTC---TTTCA---TAC-------CAG-T-CA--
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   40402 23 -     72089 A----G-CA--AGAC--AA--------TTC---TTTCA---CAC-------C------A--
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 I 4
s Bison_bison.KN264915.1                                  6556549 23 +   6870073 A----A-GA--GGAC--AA--------TTC---TTTCA---CAC-------C------A--
i Bison_bison.KN264915.1                                C 0 I 4
s Bos_indicus.CM003021.1                                138136780 23 - 161108492 A----A-GA--GGAC--AA--------TTC---TTTCA---NAC-------C------A--
i Bos_indicus.CM003021.1                                C 0 I 4
s Bos_mutus.JH883513.1                                     569158 23 -    998990 A----A-GA--GGAC--AA--------TTC---TTTCA---CAC-------C------A--
i Bos_mutus.JH883513.1                                  C 0 I 4
s Bos_taurus.CM000177.6                                 136292513 23 - 158972876 A----A-GA--GGAC--AA--------TTC---TTTCA---CAC-------C------A--
i Bos_taurus.CM000177.6                                 C 0 I 4
s Bubalus_bubalis.KI419065.1                              1228134 23 -   1914593 A----G-GA--GGAC--AA--------TTC---TTTCA---CAC-------C------A--
i Bubalus_bubalis.KI419065.1                            C 0 I 4
s Cacajao_ayresi.k141_724503                               110345 25 -    171031 A----A-GA--GGAC--AA--------TCC---TCTCA---TAC-------C------AGT
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                  9371 25 +    125063 A----A-GA--GGAC--AA--------TCC---TCTCA---TAC-------C------AGT
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                11419 25 -    216513 A----A-GA--GGAC--AA--------TCC---TCTCA---TAC-------C------AGT
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        3958 25 -    134917 A----A-GA--GGAC--AA--------TCC---TCTCA---TAC-------C------AGT
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3216271 20 -   8989139 A----G-GA--G-----AA--------TTC---TTTCA---TAC-------C------A--
i Camelus_bactrianus.KN276303.1                         C 0 I 487
s Camelus_dromedarius.KN271192.1                           394455 20 -  15254737 A----G-GA--G-----AA--------TTC---TTTCA---TAC-------C------A--
i Camelus_dromedarius.KN271192.1                        C 0 I 4
s Camelus_ferus.KB016973.1                                2970192 20 +   6889770 A----G-GA--G-----AA--------TTC---TTTCA---TAC-------C------A--
i Camelus_ferus.KB016973.1                              C 0 I 4
s CanFam4.chr31                                          11515238 17 +  39901454 A----A-CA--GGAC--AA--------GTC---TCTT------------------------
i CanFam4.chr31                                         C 0 I 9
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   10255 17 +     87036 A----A-CA--GGAC--AA--------GTC---TCTT------------------------
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 I 9
s Canis_lupus_dingo.QKWQ01001993.1                       11261897 17 -  35597290 A----A-CA--GGAC--AA--------GTC---TCTT------------------------
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 I 9
s Canis_lupus_familiaris.chr31                           11084426 17 +  39895921 A----A-CA--GGAC--AA--------GTC---TCTT------------------------
i Canis_lupus_familiaris.chr31                          C 0 I 9
s Canis_lupus_orion.HG994411.1                           16451460 17 -  44759192 A----A-CA--GGAC--AA--------GTC---TCTT------------------------
i Canis_lupus_orion.HG994411.1                          C 0 I 9
s Capra_aegagrus.CM003214.1                              21322409 23 + 157394656 A----G-GA--AGAC--AA--------TTC---TTTCA---CAC-------C------A--
i Capra_aegagrus.CM003214.1                             C 0 I 4
s Capra_hircus.CM004562.1                               135703636 23 - 157403528 A----G-GA--AGAC--AA--------TTC---TTTCA---CAC-------C------A--
i Capra_hircus.CM004562.1                               C 0 I 4
s Capromys_pilorides.CapPil_scaffold_647363                  1157 24 +      1887 A----A-GA--GGA---AA--------TTC---TCTCA---CAC-------T------CAT
i Capromys_pilorides.CapPil_scaffold_647363             C 0 C 0
s Carlito_syrichta.NW_007248099.1                          305758 25 +    345090 A----A-GA--GGAC--AA--------TTC---TCTCC---TTA-------A------AGT
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               56666 27 +     67245 A----A-GA--ACAC--AA--------TTC---TCTCA---TACT---AGTC------A--
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   27172 25 +     33760 A----A-GA--AGAC--AA--------TTT---TCTCA---TAC-------C------AGT
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   155978 23 -    276539 A----G-GA--GGAA--AA--------TTC---TGTCA---TAC-------C------A--
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18887184 25 -  29618158 A----A-GA--GAAC--GA--------TTC---TCTGA---TAC-------C------AGT
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 4730 25 -     26817 A----A-GA--GAAC--GA--------TTC---TCTGA---TAC-------C------AGT
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                 8970 25 +     25043 A----A-GA--GAAC--GA--------TTC---TCTGA---TAC-------C------AGT
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         4807 25 +     21754 A----A-GA--GGAC--AA--------TTC---TCTTC---TAA-------A------AGT
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4360456 19 +   7569818 -----------------AA--------TTC---TCTCA---TAC-------CAG-T-CA--
i Ceratotherium_simum.JH767818.1                        I 4 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623          211 19 -      9338 -----------------AA--------TTC---TCTCA---TAC-------CAG-T-CA--
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    I 4 C 0
s Cercocebus_atys.KQ010443.1                              6551262 25 +   6739814 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      52739 25 -     54931 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         17723 25 -     19697 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         55254 25 -    107033 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        1697 24 -      3853 A----A-GA--GGAT--GA--------TTC---T-CCA---TAT-------C------AAT
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          25629 25 +     30494 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           1653 25 -      4022 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          1546 25 -      3505 A----A-GA--GGAT--GA--------TTC---TCCCG---TAT-------C------AAT
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           20350 25 +     35983 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11986872 25 +  12117833 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46473625 25 +  46592721 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      31452 25 +     33420 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        1488 25 -      3443 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      2479 25 -      4669 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        2279 25 -      4411 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         1804 25 -      4205 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_1070855            24 25 -      1715 A----A-GA--GGAC--AA--------TTC---TCTTG---CAC-------C------AGT
i Chaetophractus_vellerosus.ChaVel_scaffold_1070855     C 0 C 0
s Cheirogaleus_major.k141_1157592                           55649 25 -     68416 A----A-GA--GAAC--AA--------TTG---TCTCA---TAC-------C------AGT
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            4698 25 +     13308 A----A-GA--GAAA--AA--------TTA---TCTCA---TAC-------C------AGT
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             1983 25 -     18223 A----A-GA--GGAC--AA--------TCC---TCCCA---GAC-------C------AGT
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             19006 25 +     25473 A----A-GA--GGAC--AA--------TCC---TCCCA---GAC-------C------AGT
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           38045 25 +     57117 A----A-GA--GGAC--AA--------TCC---TCCCA---GAC-------C------AGT
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          42720 25 +     54541 A----A-GA--GGAC--AA--------TCC---TCCCA---GAC-------C------AGT
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15958535 25 +  43084221 A----A-GA--GGAC--AA--------TTA---CCTCG---TAC-------A------AGT
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         67566 25 +    196370 A----A-GA--GGAC--AA--------TCT---TCTCA---TAC-------C------AGT
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          11741 25 +     40510 A----A-GA--GGAC--AA--------TCT---TCTCA---TAC-------C------AGT
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15135085 25 -  15256731 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      30131 25 -     53260 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101140580 25 + 101219884 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                13646 25 -     21363 A----A-GA--GGAC--AA--------TTC---TCTTG---TAC-------C------AGT
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           758952 25 +    964067 A----A-GA--GGAC--AA--------TTC---TCTTG---TAC-------C------AGT
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10879159 25 +  10971483 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147660317 25 + 156195979 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            12303 25 +     23629 A----A-GA--GGAT--GA--------TTC---TCTCA---TAT-------C------AAT
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60609915 26 +  78930452 A----A-GA--AGAG--GG--------TTC---TCTTTACCAAT-------C------A--
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         36373 27 -     40477 G----A-GA--AAAC--AA--------TTC---TCTCA---TAC--CCA-TC------A--
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 274240 24 -    399297 A----A--A--AGAC--AA--------TTT---TCTGA---TAC-------A------ACT
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53025429  8 +  72327488 -------------------------------------A---CAg-------c------cat
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             15915 10 -     19186 -------------------------------------A---TAC-------CAG-T-CA--
i Crocidura_indochinensis.CroInd_scaffold_38409         I 17 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            48560 17 -     70449 A----A-CA--GGAC--AA--------TTC---TCTT------------------------
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 I 9
s Ctenodactylus_gundi.CteGun_scaffold_447                  204973 25 -    956709 A----A-AA--AGAC--AA--------TTC---TCTCC---TAC-------C------AGC
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 27225 25 -     67205 A----A-GA--GGAT--AA--------TTC---TCTCA---TAC-------C------CAT
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          178829 25 -   6883506 A----A-GA--GGAC--AA--------TAC---TCTTG---CAC-------C------AGT
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16841520 25 +  31942871 A----A-GA--GAAC--AA--------TTC---TTTCA---TAC-------C------AGT
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80033978 27 -  96802777 A----G-GA--GGAC--AA--------TTC---TTTCA---TAC-------CAG-T-CA--
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18695977 27 -  18957592 a----a-aa--acac--ag--------ttc---TCTCA---TACT---AGTC------A--
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 319109 28 +    993696 A----AACA--GGAC--AA--------TTC---TCTCA---TAC-------CAG-T-CA--
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_170113                  376 19 +       818 -----------------AA--------TTC---TCTCA---TAC-------CAG-T-CA--
i Diceros_bicornis.DicBicMic_scaffold_170113            I 4 C 0
s Dipodomys_ordii.KN672545.1                              3652166 10 +   4240102 -----------------------------------taa---tac-------t------AGT
i Dipodomys_ordii.KN672545.1                            I 3 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 23720 10 +     28912 -----------------------------------TAA---TAC-------T------AGT
i Dipodomys_stephensi.DipSte_scaffold_44365             I 3 C 0
s Echinops_telfairi.JH980316.1                           22991250 25 -  44670279 A----A-GA--GGAG--CA--------TTC---TTTTG---TGC-------C------TTC
i Echinops_telfairi.JH980316.1                          I 2 C 0
s Eidolon_helvum.KE772537.1                                  9360 27 +     24177 A----A-GA--TGAC--AA--------TTC---TCTCA---TACCT--A-TC------A--
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1488672 23 +   1727528 A----G-GA--GGAC--AA--------TTC---TTTCA---CAC-------C------A--
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 I 5
s Elephantulus_edwardii.JH947210.1                        7803409 25 +  15467074 A----A-GA--ATAT--AA--------TTC---TCCTG---TAC-------T------GGT
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        235884 25 -    369425 a----a-aa--aaac--aa--------ttc---tgtga---cac-------c------agt
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           2893 25 -      7838 a----a-aa--aaac--aa--------ttc---tgtga---cac-------c------agt
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85868276 17 +  99434291 A----A-CA--GGAC--AA--------TTC---TCTT------------------------
i Enhydra_lutris.KZ291749.1                             C 0 I 9
s Equus_asinus.JREZ01000062.1                             5849839 28 -   7175178 a----aaca--ggac--aG--------TTC---TCTCA---TAC-------T-GAT-CA--
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13348342 28 +  41866177 a----aaca--ggac--aG--------TTC---TCTCA---TAC-------T-GAT-CA--
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                           9832 28 +     92910 a----aaca--ggac--aG--------TTC---TCTCA---TAC-------T-GAT-CA--
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11529433 19 +  16010500 -----------gaac--aA--------TTC---TATTA---TGT-------C------A--
i Erinaceus_europaeus.JH835290.1                        I 1 C 0
s Erythrocebus_patas.Contig8                             48767264 25 -  48907691 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          312122 27 +    330699 A----G-GA--GGAC--AA--------TTC---TTTCA---TAC-------CAG-T-CA--
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             58551 27 +     89355 A----G-GA--GGAC--AA--------TTC---TTTCA---TAC-------CAG-T-CA--
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              1719 25 +     13586 A----A-GA--GAAC--AA--------TTC---TCTCA---TAC-------C------AGT
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               1655 25 -      6809 A----A-GA--GAAC--AA--------TTC---TCTCA---TAC-------C------AGT
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             8127 25 +     36558 A----A-GA--GAAC--AA--------TTC---TCTCA---AAC-------A------AGT
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             4443 25 +     60246 A----A-GA--GAAC--AA--------TTC---TCTCA---TAC-------C------AGT
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 7931 25 +    109717 A----A-GA--GAAC--AA--------TTC---TCTCA---TAC-------C------AGT
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               12305 25 +     16540 A----A-GA--GAAC--AA--------TTC---TCTCA---TAC-------C------AGT
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                12582 25 +     27497 A----A-GA--GAAC--AA--------TTC---TCTCA---AAC-------A------AGT
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           15043 25 +     26808 A----A-GA--GAAC--AA--------TTC---TCTCA---TAC-------A------AGT
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                29771 25 +     46535 A----A-GA--GAAC--AA--------TTC---TCTCA---TAC-------C------AGT
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              12494 25 -     29447 A----A-GA--GAAC--AA--------TTC---TCTCA---TAC-------C------AGT
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129889513 17 - 159252932 A----A-CA--GGAT--AA--------TTC---TCTT------------------------
i Felis_catus.CM001386.2                                C 0 I 9
s Felis_catus_fca126.CM031420.1                         129276587 17 - 158578461 A----A-CA--GGAT--AA--------TTC---TCTT------------------------
i Felis_catus_fca126.CM031420.1                         C 0 I 9
s Felis_nigripes.FelNig_flattened_line_8080                 17722 17 +     52776 A----A-CA--GGAT--AA--------TTC---TCTT------------------------
i Felis_nigripes.FelNig_flattened_line_8080             C 0 I 9
s Fukomys_damarensis.KN123630.1                          13889718 25 -  19261668 A----A-GA--GGAC--AA--------TTT---TTTCA---TAC-------C------AGT
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     207664 25 -    847004 A----A-GA--GAAA--AA--------TAC---TCTCG---TAT-------C------AAT
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           10044 25 -     43889 A----A-GA--GAAA--AA--------TAC---TCTTG---TAT-------C------AAT
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           7093 25 +     27357 A----A-GA--GAAA--AA--------TAC---TCTCA---TAC-------C------AAT
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               152977 20 +    324696 ------------GAC--AA--------TTC---TCTCA---TAT-------G------AGT
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    178185 23 -    189561 A----G-GA--GGAC--AA--------TTC---TTTCA---TAC-------T------A--
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 I 4
s Glis_glis.GliGli_scaffold_79770                            9381 25 -     18683 A----A-GA--GGAC--AA--------TTC---TCTCA---AAC-------C------AGT
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               1838 25 -     14630 A----A-GA--CAAT--GA--------TTC---TCCCA---CAC-------C------AAT
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119648936 25 - 195582420 A----A-GA--CAAT--GA--------TTC---TCCCA---CAC-------C------AAT
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   73933 25 +    118900 A----A-GG--GGAC--AA--------TTC---TCTCA---AAC-------C------AGC
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                         2266 21 +      3980 -----------GAAT--AA--------TTC---TCTCA---TGC-------C------AGT
i Hapalemur_alaotrensis.k141_1198205                    I 1 C 0
s Hapalemur_gilberti.k141_97962                             24746 21 +     26611 -----------GAAT--AA--------TTC---TCTCA---TGC-------C------AGT
i Hapalemur_gilberti.k141_97962                         I 1 C 0
s Hapalemur_griseus.k141_1387522                             2200 21 +     56096 -----------GAAT--AA--------TTC---TCTCA---TGC-------C------AGT
i Hapalemur_griseus.k141_1387522                        I 1 C 0
s Hapalemur_meridionalis.k141_186231                        25473 21 -     42470 -----------GAAT--AA--------TTC---TCTCA---TGC-------C------AGT
i Hapalemur_meridionalis.k141_186231                    I 1 C 0
s Hapalemur_occidentalis.k141_797938                        42070 21 -     54384 -----------GAAT--AA--------TTC---TCTCA---TGC-------C------AGT
i Hapalemur_occidentalis.k141_797938                    I 1 C 0
s Helogale_parvula.HelPar_flattened_line_22962              13763 17 +     53719 A----A-TA--GGAC--AA--------TTC---TCTT------------------------
i Helogale_parvula.HelPar_flattened_line_22962          C 0 I 9
s Hemitragus_hylocrius.HemHyl_scaffold_16669                24671 23 -     91191 A----G-GA--AGAC--AA--------TTC---TTTCA---CAC-------C------A--
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 I 4
s Heterocephalus_glaber.JH602058.1                        2547829 25 +  31725842 A----A-GA--AGAC--AA--------TTC---TCTCA---TAT-------C------AGT
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               53247 25 +     73687 A----A-AA--GATT--GA--------TAC---TCTCC---CAC-------C------AGT
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              144246 19 +    277961 -----------GGAC--AA--------TTC---TTTCA---TAC-------C------C--
i Hippopotamus_amphibius.HipAmp_scaffold_1308           I 1 C 0
s Hipposideros_armiger.JXIK01001085.1                      275671 27 -    477199 A----A-GA--AGGC--AA--------TTC---TCTTA---TAA---CCGTT------A--
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              4825 27 -      9143 A----A-GA--AGGC--GA--------TTC---TCTTG---TAA---CCGTT------A--
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg2145                                    1042 31 -      4981 atctga-ca--ggatcaaa--------ttc---acaca---ttc-------c------aat
i Hoolock_leuconedys.ctg2145                               I 325 n 25
s Hyaena_hyaena.HyaHya_flattened_line_20729                 12832 17 -     67322 A----A-CA--GGAC--AA--------TTC---TCTT------------------------
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 I 9
s Hylobates_abbotti.k141_493872                              1645 25 +      5897 A----A-GA--GGAT--GA--------TTC---TCCCA---TAC-------C------AAT
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_282275                                859 25 +      1846 A----A-GA--GGAT--GA--------TTC---TCCCA---TAC-------C------AAT
i Hylobates_agilis.k141_282275                          C 0 C 0
s Hylobates_klossii.k141_584463                                22 25 -      1009 A----A-GA--GGAT--GA--------TTC---TCCCA---TAC-------C------AAT
i Hylobates_klossii.k141_584463                         C 0 C 0
s Hylobates_muelleri.k141_1133650                            1080 25 -      2775 A----A-GA--GGAT--GA--------TTC---TCCCA---CAC-------C------AAT
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             29682 25 -     60944 A----A-GA--GGAT--GA--------TTC---TCCCA---TAC-------C------AAT
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     2801 25 +     22540 A----A-GA--GGAC--AA--------TTC---TCTCA---TAC-------C------AGT
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7122595 23 +  13083262 -----A-GA--GAGT--AA--------TTC---TCTCA----AC-------C------AGT
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_3334527                                   8710 25 +      9207 A----A-GA--GAAC--AA--------TTC---TCTCA---TAC-------C------AGT
i Indri_indri.k141_3334527                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               5905 27 +     17520 C----G-GA--GAAC--AA--------TTC---TTTCA---TAC-------CAG-T-CA--
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               20737 27 +     37189 A----G-GA--GGAC--AA--------TTC---TTTCA---TAC-------CAG-T-CA--
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          46558 25 -    147782 A----A-GA--GGAT--GA--------TTC---TCTCA---TAC-------C------AGT
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   110854 27 -    115756 A----G-GA--GAAC--AG--------TTC---TTTCA---TAC---CAGTC------A--
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258403748 25 - 285822530 A----A-GA--GAAC--AA--------TTC---TCTCA---TAC-------C------AGT
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        20646 25 +     39228 A----A-GA--GAAC--AA--------TTC---TCTCA---TAC-------C------AGT
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            50020 25 +     63517 A----A-GA--GAAC--AA--------TTC---TCTCA---TAC-------C------AGT
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        75242 25 +    116806 A----A-GA--GAAC--AA--------TTC---TCTCA---TAC-------C------AGT
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     28283 25 -     33031 A----A-GA--GAAC--AA--------TTC---TCTCA---TAC-------C------AGT
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3082522 17 -   3498232 A----A-CA--GGAA--AA--------TTC---GCTT------------------------
i Leptonychotes_weddellii.KB714749.1                    C 0 I 9
s Lepus_americanus.LepAme_scaffold_62849                     9745 25 +     22452 A----A-GA--GGAT--AC--------TTC---TCTTA---TTT-------T------AGT
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            133080 27 +   3060487 A----G-GA--GGAC--AA--------TTC---TTTCA---TAC-------CAG-T-CA--
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19244349 25 +  19376315 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            7389 25 +     84689 A----T-GA--GAAA--AA--------TAC---TCTCA---TAC-------C------AAT
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3775140 25 +   6799190 A----T-GA--GAAA--AA--------TAC---TCTCA---TAC-------C------AAT
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20587820 25 -  62548349 A----A-GA--GGGT--GA--------TTC---TCTTG---TGC-------C------AGT
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11083882 17 +  39895028 A----A-CA--GGAC--AA--------GTC---TCTT------------------------
i Lycaon_pictus.CM007556.1                              C 0 I 9
s Macaca_arctoides.k141_2201161                             16034 25 +     74745 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12702540 25 +  12821369 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               4636 25 +      6569 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           42937 25 +     63263 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_1068107                               11513 25 +     12679 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                1086 25 +      3017 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  42698 25 -     79256 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196031616 25 + 196197964 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11441722 25 +  11645122 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   1645 25 -     46448 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                1475 25 -      3617 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 11808 25 -     55006 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43836845 25 +  43892939 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                4068 25 -      5978 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               1650 25 -     27140 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------CAT
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43433510 25 -  43563597 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4446336 25 -   4543643 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            143150 27 +    252755 A----A-CA--GGAC--AT--------TTC---TCTCA---TTC-------CAG-T-CA--
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             33214 27 +     58827 A----A-CA--GGAC--AT--------TTC---TCTCA---TTC-------CAG-T-CA--
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36870442 23 +  64221397 -----A-GC--GGGT--AA--------TTC---TCTCA----AC-------C------AGT
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_1828            225774 17 -    226874 A----A-CA--GGAC--AA--------TTC---TCTT------------------------
i Mellivora_capensis.MelCap_flattened_line_1828         C 0 I 9
s Meriones_unguiculatus.MerUng_scaffold_52233                8251 26 +     15977 A----A-AA--AGAT--AA--------TTT--ATCTGA---TAC-------C------AGC
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 I 89
s Mesocricetus_auratus.KB708139.1                         1043148 25 -  26018355 A----A-AA--AGAT--AA--------TTC---TCTGA---TAc-------c------agt
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_183284                    776 27 +      2166 A----G-GA--GGAC--AA--------TTC---TTTCA---TAC-------CAG-T-CA--
i Mesoplodon_bidens.MesBid_scaffold_183284              C 0 C 0
s Microcebus_murinus.CM007691.1                          16506865 25 +  47401472 A----A-GA--GAAC--AA--------TTC---TTTCA---TAC-------C------AGT
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  28196 25 -     48017 A----A-GA--GGAT--CA--------TTT---TCTTG---TGC-------C------TTC
i Microgale_talazaci.MicTal_scaffold_34660              I 2 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               19826 27 -     32043 A----A-GA--ACAA--AA--------TTC---CCTCA---TACT---GGTC------A--
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22816032 25 -  98408828 a----g-aa--agac--aa--------ttC---TGTGA---TAC-------C------Aat
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8206547 27 +  10048721 A----A-GA--GGAC--AA--------TTC---TCTCA---GGC---CACTC------A--
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            31228 27 +     45743 A----A-GA--GGAC--AA--------TTC---TCTCA---GGC---CACTC------A--
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        32183 25 +     34273 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         7820 17 -    104932 A----A-CA--GGAC--AA--------TTC---GCTT------------------------
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 I 9
s Mirza_zaza.k141_226143                                     2278 25 +      8497 A----A-GA--GAAC--AA--------CTC---TTTCA---TAC-------C------AGT
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 143503 27 +    154973 A----G-GA--GGAC--AA--------TTC---TTTCA---TAC-------CAG-T-CA--
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                158359 30 +    265003 A----A-GA--ACAC--AA--------TTC---TCTCA---TAATTTTAGTC------A--
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 1770 23 -      4346 A----G-GA--GGAC--AA--------TTC---TTTCA---CAC-------C------A--
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 I 4
s Mungos_mungo.MunMun_flattened_line_8729                  141453 17 -    168139 A----A-TA--GGAC--AA--------TTC---TCTT------------------------
i Mungos_mungo.MunMun_flattened_line_8729               C 0 I 9
s Murina_feae.MurFea_scaffold_2254                          16364 27 -    100666 A----A-GA--GAAC--AA--------TTC---TCTCA---TAC---CGGTC------A--
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70761898 25 +  92629107 A----A-AA--AGGC--TA--------TTC---TCTGA---TAC-------t------agt
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75485022 25 +  98207768 A----A-AA--AGGC--TA--------TTC---TCTGA---TAA-------t------agt
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67549338 25 +  89017189 A----A-AA--TGAC--TA--------TTC---TCTGA---tac-------t------agt
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74324441 25 +  97876770 A----A-AA--AGGC--TA--------TTC---TCTGA---TAA-------t------agt
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              7893 25 +     98495 A----A-GA--GGAC--AA--------TTC---TTTCA---TGC-------C------AGT
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4420669 17 -  28371801 A----A-CA--GGAC--AA--------TTC---TCTT------------------------
i Mustela_putorius.JH417978.1                           C 0 I 9
s Myocastor_coypus.MyoCoy_scaffold_3653                     86848 25 -    117718 A----A-GA--GGAC--AA--------TTC---TCTCA---CAC-------C------CAT
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               964691 27 +   8389877 A----A-GA--GAAC--AA--------TTC---TCTCA---TAC---CCGTC------A--
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5016368 27 +   6462685 A----A-GA--GAAC--AA--------Ttc---tctca---tac---ctgtc------a--
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3462277 27 -   3747815 A----A-GA--GAAC--AA--------TTC---TCTTA---TAC---CCGTC------A--
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         7474 27 +     66751 A----A-GA--GAAT--AA--------TTC---TCTCA---TACCT---GTC------A--
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             2219 25 -      8794 A----A-GA--GGAC--AA--------TTC---TCTTG---CAC-------C------AGT
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nasalis_larvatus.k141_153429                               4547 25 +     48152 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4481421 17 -  14209539 A----A-CA--GGAC--AA--------TTC---GCTT------------------------
i Neomonachus_schauinslandi.NINY01007774.1              C 0 I 9
s Neophocaena_asiaeorientalis.KZ688543.1                  3948112 27 -   4490290 A----G-GA--GGAC--AA--------TTC---TTTCA---TAC-------CAG-T-CA--
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  46478 27 +     94413 A----A-GA--ACAT--AA--------TTA---TCTCA---TACT---GGTC------A--
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1223136                          10314 25 -     11253 A----A-GA--GGAT--GA--------TTC---TCCCA---TAC-------C------AAT
i Nomascus_annamensis.k141_1223136                      C 0 C 0
s Nomascus_concolor.k141_468488                               957 25 -      1482 A----A-GA--GGAT--GA--------TTC---TCCCA---TAC-------C------AAT
i Nomascus_concolor.k141_468488                         C 0 I 32
s Nomascus_gabriellae.k141_906566                             946 25 -      2544 A----A-GA--GGAT--GA--------TTC---TCCCA---TAC-------C------AAT
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             21420 25 -  18771707 A----A-GA--GGAT--GA--------TTC---TCCCA---TAC-------C------AAT
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_844529                                   694 25 +      2124 A----A-GA--GGAT--GA--------TTC---TCCCA---TAC-------C------AAT
i Nomascus_siki_a.k141_844529                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                26878 17 +   3668941 A----A-CA--GGAC--AA--------GTC---TCTT------------------------
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 I 9
s Nycticebus_bengalensis.LG16                            65563719 25 -  95554990 A----T-GA--GAAA--AA--------TAC---TCTCA---TAC-------C------AAT
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                             564 25 +      6470 A----T-GA--GAAA--AA--------TAC---TCTCA---TAC-------C------AAT
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65666088 25 +  89412551 A----T-GA--GAAA--AA--------TAC---TCTCA---TAC-------C------AAT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4992407 24 -  23139505 A----A-GG--AGAT--GA--------TTT---TCT-A---TAC-------T------GGT
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3675580  2 +  10294119 t----t-------------------------------------------------------
i Octodon_degus.JH651621.1                              C 0 I 26
s Odobenus_rosmarus.KB229369.1                             676079 17 -   3126709 A----A-CA--GGAC--AA--------TTC---GCTT------------------------
i Odobenus_rosmarus.KB229369.1                          C 0 I 9
s Odocoileus_virginianus.KZ101650.1                       1076895 23 +   1425656 A----G-GA--GGAC--AA--------TTC---TTTCA---CAC-------C------A--
i Odocoileus_virginianus.KZ101650.1                     C 0 I 5
s Okapia_johnstoni.LVCL01S0017931.1                         34057 23 +     78940 A----G-GA--GGAC--AA--------TTC---TTTCA---TAC-------T------A--
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 I 4
s Ondatra_zibethicus.OndZib_scaffold_6821                  121363 25 +    145789 A----A-AA--AGAC--AA--------TTC---TGAGA---TAC-------C------AGT
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  33304 25 +     62360 A----A-AA--AGAC--AA--------TTC---TCTGA---TAC-------C------AAT
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7221796 27 -   7562323 A----G-GA--GGAC--AA--------TTC---TTTCA---TAC-------CAG-T-CA--
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              40263 25 -     66828 A----A-GA--GGAT--AA--------ATC---TCTTG---TGC-------C------AGT
i Orycteropus_afer.OryAfe_flattened_line_13509          I 99 C 0
s Oryctolagus_cuniculus.CM000803.1                      141872394 25 + 163896628 a----a-ga--ggat--ac--------ttc---tcttt---ttt-------t------agt
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      304213 17 -    505867 A----A-CA--GGAC--AA--------GTC---TCTT------------------------
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 I 9
s Otolemur_crassicaudatus.k141_321880                       35732 25 +     38679 A----A-GA--GAAA--AA--------TAC---TCTCG---TAT-------C------AAT
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18005173 25 -  38779656 a----a-gg--gaaa--aa--------tac---tCTCG---TAT-------C------AAT
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134074473 23 - 275406953 A----G-GA--AGAC--AA--------TTC---TTTCA---CAC-------C------A--
i Ovis_aries.CM001582.2                                 C 0 I 4
s Ovis_canadensis.OviCan_scaffold_6251                      75687 23 +    140051 A----G-GA--AGAC--AA--------TTC---TTTCA---CAC-------C------A--
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 I 4
s Pan_paniscus.CM003386.1                               127571178 25 - 205426864 A----A-GA--GGAT--GA--------TTC---TCCCA---TAC-------C------AAT
i Pan_paniscus.CM003386.1                               C 0 I 32
s Pan_troglodytes.CM009241.2                            120148325 25 - 196562556 A----A-GA--GGAT--GA--------TTC---TCCCA---TAC-------C------AAT
i Pan_troglodytes.CM009241.2                            C 0 I 32
s Panthera_onca.PanOnc_flattened_line_1615                  30676 17 +    295523 A----A-CA--GGAT--AA--------TTC---TCTT------------------------
i Panthera_onca.PanOnc_flattened_line_1615              C 0 I 9
s Panthera_pardus.KV860323.1                              3634280 17 +  18214204 A----A-CA--GGAT--AA--------TTC---TCTT------------------------
i Panthera_pardus.KV860323.1                            C 0 I 9
s Panthera_tigris.KE721879.1                              5024057 17 -   6340057 A----A-CA--GGAT--AA--------TTC---TCTT------------------------
i Panthera_tigris.KE721879.1                            C 0 I 9
s Pantholops_hodgsonii.KE114631.1                         1063331 23 -   1292953 A----G-GA--AGAC--AA--------TTC---TTTCA---CAC-------C------A--
i Pantholops_hodgsonii.KE114631.1                       C 0 I 4
s Papio_anubis.CM001492.2                               188152294 25 - 188283584 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            48506 25 +     76494 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47509691 25 +  47705337 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 63673 25 -    104429 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  13459 25 -     29451 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                33862 25 +     35859 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    112009 17 -    135482 A----A-CA--GGAC--AA--------TTC---TCTT------------------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 I 9
s Perognathus_longimembris.PerPac_flattened_line_22291      39708 10 -     45160 -----------------------------------TAG---TAC-------T------AGT
i Perognathus_longimembris.PerPac_flattened_line_22291  I 3 C 0
s Peromyscus_maniculatus.KI615518.1                       4946479 25 -   8017169 A----A-AA--AGAC--AA--------TTC---TCTGA---TAC-------c------agt
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            118413 27 -    122454 A----G-GA--GGAC--AA--------TTC---TTTCA---TAC-------CAG-T-CA--
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           1548 25 -      3310 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       21454 25 -     82327 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           18206 25 +     19957 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26736215 25 +  26888534 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            93464 27 +    112873 A----G-AA--GAAC--AA--------TTC---TCTCA---TAC---CAGTC------A--
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             40058 25 -     61926 A----A-GA--GGAC--AA--------TCC---TCTCA---TAC-------C------AGT
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        21487 25 +     78826 A----A-GA--GGAC--AA--------TCC---TCTCA---TAC-------C------AGT
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              5438 25 -     15800 A----A-GA--GGAC--AA--------TCC---TCTCA---TAC-------C------AGT
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                         8636 25 -     16101 A----A-GA--GGAC--AA--------TCC---TCTCA---TAC-------C------AGT
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          1945 25 +      9673 A----A-GA--GGAC--AA--------TCC---TCTCA---TAC-------C------AGT
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13470939 25 -  19735023 A----A-GA--GGAC--AA--------TCC---TCTCA---TAC-------C------AGT
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                            9847 25 -     31692 A----A-GA--GGAC--AA--------TCC---TCTCA---TAC-------C------AGT
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           2480 27 +     21690 T----G-GA--GGAC--AA--------TTC---TTTCA---TAC-------CAG-T-CA--
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       19239 25 +     44506 A----A-GA--GGAC--AG--------CCC---TCCCA---GAC-------C------AGT
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        19457 25 +     67491 A----A-GA--GGAC--AA--------CCC---TCCCA---GAC-------C------AGT
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                       9702 25 -     98129 A----A-GA--GGAC--AA--------CCC---TCCCA---GAC-------C------AGT
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     19302 25 +    147771 A----A-GA--GGAC--AG--------CCC---TCCCA---GAC-------C------AGT
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        19553 25 -     23762 A----A-GA--GGAC--AA--------CCC---TCCCA---GAC-------C------AGT
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_2078842                         19501 25 -     19696 A----A-GA--GGAC--AA--------CCC---TCCCA---GAC-------C------AGT
i Plecturocebus_dubius.k141_2078842                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         19375 25 +    152463 A----A-GA--GGAC--AA--------ACC---TCCCA---GAC-------C------AGT
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      6132 25 +      8943 A----A-GA--GGAC--AA--------CCC---TCCCA---GAC-------C------AGT
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                          9092 25 +    134592 A----A-GA--GGAC--AA--------CCC---TCCCA---GAC-------C------AGT
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          19685 25 -     75465 A----A-GA--GGAC--AA--------CCC---TCCCA---GAC-------C------AGT
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              183732 25 -    373494 A----A-GA--GGAT--GA--------TTC---TCCCA---TAC-------C------AAT
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19803636 25 +  19899266 A----A-GA--GGAT--GA--------TTC---TCCCA---TAC-------C------AAT
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               1785 25 -     15069 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              1919 25 +     14865 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                73111 25 +     78963 A----A-AA--GATT--GA--------TAC---TCTCC---CAC-------C------AGT
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6845122 25 +  12164890 A----A-GA--GAAC--AA--------TTC---TCCCA---TAC-------G------AGT
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     13557 25 -     30946 A----A-GA--GAAC--AA--------TTC---TCTCA---TAC-------C------AGT
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                          263 25 +     11805 A----A-GA--GAAA--AA--------TTC---TTTCA---TAC-------T------AGT
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           39594 25 +     52369 A----A-GA--GAAC--AA--------TTC---TCTCA---TAC-------C------AAT
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         31982 25 -     44753 A----A-GA--GAAC--AA--------TTC---TCTCA---TAC-------C------AGT
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            13904 25 +     27322 A----A-GA--GAAC--AA--------TTC---TCTCA---TAC-------C------AGT
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       13546 25 -     53241 A----A-GA--GAAC--AA--------TTC---TCTCA---TAC-------C------AGT
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         35818 25 -     48185 A----A-GA--GAAC--AA--------TTC---TCTCA---TAC-------C------AGT
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           29319 26 +     77221 a----a-aa--agat--aa--------ttt--atctGA---TAT-------G------AGC
i Psammomys_obesus.NESX01026517.1                       C 0 I 84
s Pteronotus_parnellii.KE867983.1                            1026 27 -     27784 A----A-GA--ACAC--AA--------TTC---TCTCA---TACT---AGtc------a--
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        242541 17 -    344369 A----A-CA--GGAC--AA--------TTC---TCTT------------------------
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 I 9
s Pteropus_alecto.KB031157.1                             13243153 27 -  17261082 A----A-GA--TGAC--AA--------TTA---TCTCA---TACCT--A-TC------A--
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             601107 27 -   3946241 A----A-GA--TGAC--AA--------TTA---TCTCA---TACCT--A-TC------A--
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131530873 17 - 161321710 A----A-CA--GGAT--AA--------TTC---TCTT------------------------
i Puma_concolor.QAVW01000427.1                          C 0 I 9
s Pygathrix_cinerea.k141_374971                             25909 25 +     56732 A----A-GA--GGAT--GA--------TTC---TCCCA---TTT-------C------AAT
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6802399 25 +   6970761 A----A-GA--GGAT--GA--------TTC---TCCCA---TGT-------C------AAT
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             1791 25 +     18040 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                12981 23 +     68503 A----G-GA--GGAC--AA--------TTC---TTTCA---CAC-------C------A--
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 I 5
s Rattus_norvegicus.chr11                                13911263 25 +  90463843 A----A-AA--AGAC--AA--------CTT---TCTAA---TAc-------t------agt
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1784755 27 +   2252614 a----a-ga--aggt--aA--------TTC---TCTCA---TACCCTT---T------A--
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           12347 25 -     14454 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206373673 25 - 206558726 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44851321 25 -  45163003 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                16456 27 +    109198 A----A-TA--TGAC--AA--------TTT---TCTCA---TGCCT---GTC------A--
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       4759 23 +     12214 A----G-GA--AGAC--AA--------TTC---TTTCA---CAC-------C------A--
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 I 4
s Saimiri_boliviensis.NW_024100938.1                     15669110 25 -  43202129 A----A-GA--AGAT--GA--------TTC---TCTCA---TAC-------C------AGT
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                         985 25 +     34089 A----A-GA--AGAT--GA--------TTC---TCTCA---TAC-------C------AGT
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                               916 25 -     60842 A----A-GA--AGAT--GA--------TTC---TCTCA---TAC-------C------AGT
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                               985 25 +     67014 A----A-GA--AGAT--GA--------TTC---TCTCA---TAC-------C------AGT
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                               985 25 +     60816 A----A-GA--AGAT--GA--------TTC---TCTCA---TAC-------C------AGT
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                  913 25 -     76454 A----A-GA--AGAT--GA--------TTC---TCTCA---TAC-------C------AGT
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17337493 25 -  30362882 A----A-GA--GAAC--GA--------TTC---TCTCA---TAC-------C------AGT
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         17094 25 -     62485 A----G-GA--GAAC--GA--------TTC---TCTCA---TAC-------C------AGT
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   28511 26 -    114521 A----A-GA--GGAT--GG--------TTC---TCTCTACCAAT-------C------A--
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1527475                       24334 25 +     26421 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       4795 25 +     20762 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         38529 25 +     40653 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                            9087 25 -     12194 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     22507 25 -     27512 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         31528 25 -     33692 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   94553 25 -    120886 A----A-AA--TGAC--AA--------TTT---TCTGA---TAC-------C------AGT
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            14756 23 +    739146 A----A-AA--GGAC--AA--------TTC---TCTCA---TAA-------C------A--
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2236519 23 +   2842873 -----A-GA--GGGT--AA--------TTC---TCTCA----AC-------C------AGT
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             231539 17 -    276980 A----A-CA--GGAC--AA--------TTC---TCCT------------------------
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 I 9
s Suricata_suricatta.SurSur_flattened_line_20339            24120 17 +     62062 A----A-TA--GGAC--AA--------TTC---TCTT------------------------
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 I 9
s Sus_scrofa.CM000824.4                                 189269052 18 + 218635234 -----------AGAC--AA--------TTA---TTTCA---TAC-------C---------
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                     13898479 25 +  13920577 A----A-GA--GGAT--GA--------TTC---TCCCA---TAC-------C------AAT
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               2959 27 -      6213 A----A-GA--GGAC--AA--------TTC---TCTTA---TAC---CAGTC------A--
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               11896 25 +     45698 A----A-GA--GGAC--AA--------TTC---TCTTG---CAC-------C------AGT
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      803901 28 +   1148477 A----AACA--AGAC--AA--------TTC---TCTCA---TAC-------CAG-T-CA--
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  54563 28 +     99546 A----AACA--AGAC--AA--------TTC---TCTCA---TAC-------CAG-T-CA--
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               23248 25 +     42269 A----A-GA--GGAC--AA--------TTC---TCTCA---TAA-------A------AGT
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               56562 25 +     65473 A----A-GA--GGAC--AA--------TTC---TCTCA---TAA-------A------AGT
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194003829 25 - 194193292 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                   749 25 +      6782 A----A-GG--GGAC--AA--------TTC---TCTTG---CAC-------C------AGT
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  133043 23 -    259118 -----------ACAC--AA--------TTC---TCTAA---TACT---AGTC------A--
i Tonatia_saurophila.TonSau_scaffold_3334               I 1 C 0
s Trachypithecus_auratus.k141_738098                        22905 25 +     38948 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   16632 25 -     32910 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       22530 25 +     24652 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      1415 25 -      3559 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           39354 25 -     54611 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       15353 25 +     17312 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    22723 25 -     25040 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          1389 25 +      3528 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  47751 25 +     51589 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       10919 25 +     14732 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       1397 25 -     28054 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44656192 25 -  44834318 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        1202 25 +      3372 A----A-GA--GGAT--GA--------TTC---TCCCA---TAT-------C------AAT
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   2396 26 +     90398 A----G-GA--GGAC--AA--------TTCTTCTTTCA---CAT-------C------G--
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 I 4
s Trichechus_manatus.JH594618.1                          16078492 25 +  31416278 A----A-GA--GGGT--AA--------TTC---TCTTG---TGC-------C------CGT
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2788325 33 -   3938065 a----a-ta--aaat--aaaaatgactctc---TCTTA---TAC-------C------AGT
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                     886 33 +     13056 A----A-TA--AAAT--AAAAATGACTCTC---TCTTA---TAC-------C------AGC
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69310514 27 -  96451834 A----G-GA--GGAC--AA--------TTC---TTTCA---TAC-------CAG-T-CA--
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 23716 26 -     25548 A----A-GA--GGGT--AG--------TTC---TCTCTACCAGT-------C------A--
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6511129 17 +  28682327 A----A-CC--AGAC--AA--------CTC---TCTT------------------------
i Ursus_maritimus.KK498671.1                            C 0 I 9
s Varecia_rubra.k141_432109                                  2061 25 -     20643 A----A-GA--GAAC--AA--------TTC---TCTCA---TAC-------C------AGT
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             21606 25 -     33872 A----A-GA--GAAC--AA--------TTC---TCTCA---TAC-------C------AGT
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1521833 22 -   2331223 A----G-GAGAG-----AA--------TTC---TTTCA---TAC-------C------A--
i Vicugna_pacos.KN269600.1                              C 0 I 4
s Vulpes_lagopus.VulLag_flattened_line_2045                134283 17 -    281493 A----A-CA--GGAC--AA--------GTC---TCTT------------------------
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 I 9
s Xerus_inauris.XerIna_scaffold_7898                       123610 25 -    134049 A----A-GA--GGAC--AA--------TTC---TCTTA---AAC-------C------AGT
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        210807 17 -    227762 A----A-CA--GGAC--AA--------TTC---ACTT------------------------
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 I 9
s Ziphius_cavirostris.ZipCav_flattened_line_127025           4017 27 -      8775 A----G-GA--GGAC--AA--------TTC---TTTCA---TAC-------CAG-T-CA--
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_141308              5680 150 -     12508 I
e Megaderma_lyra.MegLyr_scaffold_3562                       61508  0 -    234502 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16291  1 -    119109 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     12283  2 -     20485 I
e Jaculus_jaculus.JH725517.1                              8561873  2 +  11848649 I
e Allactaga_bullata.AllBul_scaffold_70162                    8911  2 -     22067 I
e Perodicticus_potto.k141_713187                            21218  0 -     27972 C
e Perodicticus_ibeanus.k141_117958                           1921  0 -     23713 C
e Nannospalax_galili.KL201303.1                            107449  0 +    362372 C
e Dolichotis_patagonum.DolPat_scaffold_14102                33375  0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             56104 16 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                14631 16 +     26546 I
e Cavia_tschudii.CavTsc_scaffold_488                       173989  0 +    436027 C
e Cavia_porcellus.DS562889.1                             15795798  0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15783848 16 -  24422027 I

a score=0.000000
s hg38.chr4_GL000008v2_random                                8468 32 +    209709 CAC-----AAG-A----A-T----GATATCTGT-AGA-ATCAAAA-------G-T--T--G
s Acinonyx_jubatus.LLWD01000356.1                         2030559 26 +   3721120 --C-----AAG-A----A-T----GGCATTTGT-AGA-AGGAACT----------------
i Acinonyx_jubatus.LLWD01000356.1                       I 9 I 4
s Acomys_cahirinus.AcoCah_scaffold_1625                    108821 31 -    189883 CAG-----AAG-A-TAAA-T----AATATTTGT-AGA-AGGAACT----------------
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 I 9
s Ailuropoda_melanoleuca.LNAT01000321.1                  10653880 32 +  23371972 --C-----AAG-A----A-C----GGCATTTGT-AGA-GGGAACTGT-----T-T--T--G
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 9 C 0
s Ailurus_fulgens.LNAC01000003.1                          7090581 31 -  16596857 --C-----AAG-A----A-T----GGCACTTAT-AGA-GGA-ATG----CT-T-T--T--G
i Ailurus_fulgens.LNAC01000003.1                        I 9 C 0
s Allenopithecus_nigroviridis.k141_3103707                  59492 32 +     61638 CGC-----AAG-A----A-T----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        51300 32 +     53391 CGC-----AAG-A----A-C----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         2024 32 +     72529 CGC-----AAG-A----A-C----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          1600 32 +      3797 CGC-----AAG-A----A-C----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             6690 32 -     18050 CAC-----AAG-A----A-T----GAAGTCTGT-AGA-ATCAAAA-------G-T--T--G
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  7807 32 -     11521 CAC-----AAG-A----A-T----GAAGTCTGT-AGA-ATCAAAA-------G-T--T--G
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              7365 32 -     21359 CAC-----AAG-A----A-T----GAAGTCTGT-AGA-ATCAAAA-------G-T--T--G
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1856473                                5748 32 +      7227 CAC-----AAG-A----A-T----GAAGTCTGT-AGA-ATCAAAA-------G-T--T--G
i Alouatta_juara.k141_1856473                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          6662 32 -     10438 CAC-----AAG-A----A-T----GAAGTCTGT-AGA-ATCAAAA-------G-T--T--G
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            3317 32 +      7047 CAC-----AAG-A----A-T----GAAGTCTGT-AGA-ATCAAAA-------G-T--T--G
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             6601 32 +     10410 CAC-----AAG-A----A-T----GAAGTCTGT-AGA-ATCAAAA-------G-T--T--G
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1374428                             404 32 -     25526 CAC-----AAG-A----A-T----GAAGTCTGT-AGA-ATCAAAA-------G-T--T--G
i Alouatta_puruensis.k141_1374428                       C 0 C 0
s Alouatta_seniculus.k141_990213                             3322 32 +      6429 CAC-----AAG-A----A-T----GAAGTCTGT-AGA-ATCAAAA-------G-T--T--G
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3517329 14 +   4113121 --T-----ATG-A----A-T----GACATTT------------------------------
i Ammotragus_lervia.NIVO01013474.1                      I 4 I 1
s Anoura_caudifer.AnoCau_scaffold_422                      387515 29 -    631301 --C-----AAA-A----A-T----GACACTTGC-A----GGAGCT----CC-T-T--G--G
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            27962 14 +     33004 --T-----ATG-A----A-T----GACATTT------------------------------
i Antilocapra_americana.AntAmePen_scaffold_42841        I 4 I 1
s Aotus_azarae.k141_3170768                                 58996 32 +     78111 CAC-----AAG-A----A-T----GAAATCTGT-GGA-ATCAAAA-------G-G--T--G
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            1927 32 +     22701 CAC-----AAG-A----A-T----AAAATCTGT-GGA-ATCAAAA-------G-G--T--G
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5745887 32 +   9889416 CAC-----AAG-A----A-T----GAAATCTGT-GGA-ATCAAAA-------G-G--T--G
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             2479 32 -    104377 CAC-----AAG-A----A-T----GAAATCTGT-GGA-ATCAAAA-------G-T--T--G
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               2479 32 +     23246 CAC-----AAG-A----A-T----GAAATCTGT-GGA-ATCAAAA-------G-T--T--G
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                      498 26 +      5067 CAC-----AAG-A----A-T----GACATCTGT-AGA-AG--AAA----------------
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 I 4
s Arctocebus_calabarensis.k141_1161114                      14627 34 +     17483 C-C-C---AAG-C----A-T----GGCATCTGT-AGA-AGCCGGT--AT---T-T--T--T
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 5616 29 -     29036 --C-----AGA-A----A-T----GACATTTGT-A----GGAGCT----CC-T-T--T--G
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9535740 32 +  39197703 CAC-----AAG-A----A-T----GAAATCTGT-AGA-ATCAAAA-------G-T--T--G
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             57028 32 +     85812 CAC-----AAG-A----A-T----GAAATCTGT-AGA-ATCAAAA-------G-T--T--G
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 8025 32 +     89302 CAC-----AAG-A----A-T----GAAATCTGT-AGA-ATCAAAA-------G-T--T--G
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             12534 32 -     58268 CAC-----AAG-A----A-T----GAAATCTGT-AGA-ATCAAAA-------G-T--T--G
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             60522 32 +    119057 CAC-----AAG-A----A-T----GAAATCTGT-AGA-ATCAAAA-------G-T--T--G
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               2472 32 -     25888 CAC-----AAG-A----A-T----GAAATCTGT-AGA-ATCAAAA-------G-T--T--G
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 3337 34 -     16375 CAC-----AAG-A----A-T----GACATCTGA-AGA-AGCAGCT----CT-T-T--G--A
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_767228                               9309 34 -      9688 CAC-----AAG-A----A-T----GACATCTGA-AGA-AGCAGCT----CT-T-T--G--G
i Avahi_peyrierasi.k141_767228                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26377265 32 +  51448160 --T-----AGG-A----A-T----GACCCTTGT-AGA-AGGAGTT----CT-C-T--T--G
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        2496 32 -     13118 --T-----AGG-A----A-T----GACCCTTGT-AGA-AGGAGTT----CT-C-T--T--G
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   40429 14 -     72089 --T-----ATG-A----A-T----GACATTT------------------------------
i Beatragus_hunteri.BeaHun_scaffold_21644               I 4 I 1
s Bison_bison.KN264915.1                                  6556576 14 +   6870073 --T-----ATG-A----A-T----GACATTT------------------------------
i Bison_bison.KN264915.1                                I 4 I 1
s Bos_indicus.CM003021.1                                138136807 14 - 161108492 --T-----ATG-A----A-T----GACATTT------------------------------
i Bos_indicus.CM003021.1                                I 4 I 1
s Bos_mutus.JH883513.1                                     569185 14 -    998990 --T-----ATG-A----A-T----GACATTT------------------------------
i Bos_mutus.JH883513.1                                  I 4 I 1
s Bos_taurus.CM000177.6                                 136292540 14 - 158972876 --T-----ATG-A----A-T----GACATTT------------------------------
i Bos_taurus.CM000177.6                                 I 4 I 1
s Bubalus_bubalis.KI419065.1                              1228161 14 -   1914593 --T-----ATG-A----A-T----GACATTT------------------------------
i Bubalus_bubalis.KI419065.1                            I 4 I 1
s Cacajao_ayresi.k141_724503                               110370 32 -    171031 CAC-----AAG-A----A-T----GAAATCTGT-AGA-ATTAAAA-------G-T--T--G
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                  9396 32 +    125063 CAC-----AAG-A----A-T----GAAATCTGT-AGA-ATTAAAA-------G-T--T--G
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                11444 32 -    216513 CAC-----AAG-A----A-T----GAAATCTGT-AGA-ATTAAAA-------G-T--T--G
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        3983 32 -    134917 CAC-----AAG-A----A-T----GAAATCTGT-AGA-ATTAAAA-------G-T--T--G
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3216778 36 -   8989139 --C-----AAG-A----A-TGGTAGAAACTTTT-AGA-AGAAGCT----CT-T-C--T--G
i Camelus_bactrianus.KN276303.1                         I 487 C 0
s Camelus_dromedarius.KN271192.1                           394479 36 -  15254737 --C-----AAG-A----A-TGGTAGAAACTTTT-AGA-AGAAGCT----CT-T-C--T--G
i Camelus_dromedarius.KN271192.1                        I 4 C 0
s Camelus_ferus.KB016973.1                                2970216 36 +   6889770 --C-----AAG-A----A-TGGTAGAAACTTTT-AGA-AGAAGCT----CT-T-C--T--G
i Camelus_ferus.KB016973.1                              I 4 C 0
s CanFam4.chr31                                          11515264 33 +  39901454 --C-----AAGAA----A-T----TGTATTTGT-AGA-AGGAACT----CT-T-T--T--G
i CanFam4.chr31                                         I 9 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   10281 33 +     87036 --C-----AAGAA----A-T----TGTATTTGT-AGA-AGGAACT----CT-T-T--T--G
i Canis_lupus_VD.CanFam_VD_scaffold_16982               I 9 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11261923 33 -  35597290 --C-----AAGAA----A-T----TGTATTTGT-AGA-AGGAACT----CT-T-T--T--G
i Canis_lupus_dingo.QKWQ01001993.1                      I 9 C 0
s Canis_lupus_familiaris.chr31                           11084452 33 +  39895921 --C-----AAGAA----A-T----TGTATTTGT-AGA-AGGAACT----CT-T-T--T--G
i Canis_lupus_familiaris.chr31                          I 9 C 0
s Canis_lupus_orion.HG994411.1                           16451486 33 -  44759192 --C-----AAGAA----A-T----TGTATTTGT-AGA-AGGAACT----CT-T-T--T--G
i Canis_lupus_orion.HG994411.1                          I 9 C 0
s Capra_aegagrus.CM003214.1                              21322436 14 + 157394656 --T-----ATG-A----A-T----GACATTT------------------------------
i Capra_aegagrus.CM003214.1                             I 4 I 1
s Capra_hircus.CM004562.1                               135703663 14 - 157403528 --T-----ATG-A----A-T----GACATTT------------------------------
i Capra_hircus.CM004562.1                               I 4 I 1
s Capromys_pilorides.CapPil_scaffold_647363                  1181 34 +      1887 CAA-----AAT-A----T-T----GATATTTGC-AGA-AAGAGTT----CT-T-T--T--G
i Capromys_pilorides.CapPil_scaffold_647363             C 0 C 0
s Carlito_syrichta.NW_007248099.1                          305783 33 +    345090 CAC-----AGG-A----A-T----AATATCTGT-ATA-AGCAGCT----C--T-T--T--G
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               56693 28 +     67245 --T-----AAA-A----A-T----GACATTT-T-A----GGAGCT----CC-T-T--T--G
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   27197 31 +     33760 TAC-----ACA-A----G-T----G-CATTTGC-AGA-GGGAACT----CT-T-T------
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   156001 35 -    276539 --ATCACCAAG-A----A-T----GGCATTTGT-AGA-AGCAGCT----CT-T-C------
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18887209 32 -  29618158 CAC-----AAG-A----T-T----GAAATTTGT-AGA-ATTAAAA-------G-T--T--G
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 4755 32 -     26817 CAC-----AAG-A----T-T----GAAATTTGT-AGA-ATTAAAA-------G-T--T--G
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                 8995 32 +     25043 CAC-----AAG-A----T-T----GAAATTTGT-AGA-ATTAAAA-------G-T--T--G
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         4832 33 +     21754 CAC-----AGG-A----A-T----AATATCTGT-ATA-AGCAGCT----C--T-T--T--G
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4360475 33 +   7569818 --C-----AAG-A----A-C----GACATTTGT-AGa-agcagat----tt-ttt--t--c
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623          230 33 -      9338 --C-----AAG-A----A-C----GACATTTGT-AGA-AGCAGATTT-----TTT--T--C
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6551287 32 +   6739814 CGC-----AAG-A----A-T----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      52764 32 -     54931 CGC-----AAG-A----A-T----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         17748 32 -     19697 CGC-----AAG-A----A-T----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         55279 32 -    107033 CGC-----AAG-A----A-T----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        1721 32 -      3853 CGC-----AAG-A----A-T----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          25654 32 +     30494 CGC-----AAG-A----A-T----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           1678 32 -      4022 CGC-----AAG-A----A-T----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          1571 32 -      3505 CGC-----AAG-A----A-T----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           20375 32 +     35983 CGC-----AAG-A----A-T----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11986897 32 +  12117833 CGC-----AAG-A----A-T----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46473650 32 +  46592721 CGC-----AAG-A----A-T----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      31477 32 +     33420 CGC-----AAG-A----A-T----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        1513 32 -      3443 CAC-----AAG-A----A-T----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      2504 32 -      4669 CGC-----AAG-A----A-T----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        2304 32 -      4411 CGC-----AAG-A----A-T----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         1829 32 -      4205 CGC-----AAG-A----A-T----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_1070855            49 34 -      1715 CAT-----TAG-A----A-T----GACATTTGC-AGA-AGTATCT----CT-C-T--T--G
i Chaetophractus_vellerosus.ChaVel_scaffold_1070855     C 0 C 0
s Cheirogaleus_major.k141_1157592                           55674 34 -     68416 CAC-----AAG-A----A-T----GACATCTGT-AGA-AGCAGCT----CT-T-T--T--G
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            4723 34 +     13308 CAC-----AAG-A----A-T----GACATCTGT-AGA-AGCAGCT----CT-T-T--T--G
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             2008 32 -     18223 CAC-----AAG-A----A-T----GAAATCTGT-AGA-ATCAAAA-------G-T--T--G
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             19031 32 +     25473 CAC-----AAG-A----A-T----GAAATCTGT-AGA-ATCAAAA-------G-T--T--G
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           38070 32 +     57117 CAC-----AAG-A----A-T----GAAATCTGT-AGA-ATCAAAA-------G-T--T--G
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          42745 32 +     54541 CAC-----AAG-A----A-T----GAAATCTGT-AGG-ATCAAAA-------G-T--T--G
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15958560 34 +  43084221 CAA-----AAT-A----T-T----GATATTTGC-AGA-AAGAATT----CC-T-T--T--G
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         67591 32 +    196370 CAC-----AAG-A----A-T----GAAATCTGT-AGA-ATCAAAA-------G-T--T--G
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          11766 32 +     40510 CAC-----AAG-A----A-T----GAAATCTGT-AGA-ATCAAAA-------G-T--T--G
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15135110 32 -  15256731 CGC-----AAG-A----A-C----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      30156 32 -     53260 CGC-----AAG-A----A-C----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101140605 32 + 101219884 CGC-----AAG-A----A-C----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                13671 31 -     21363 CAC-----TAG-A----A-A----GACATTTGC-AGA-AGTATCT----CT-T--------
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 I 1
s Choloepus_hoffmanni.KN194586.1                           758977 31 +    964067 CAC-----TAG-A----A-A----GACATTTGC-AGA-AGTATCT----CT-T--------
i Choloepus_hoffmanni.KN194586.1                        C 0 I 1
s Colobus_angolensis.KN985967.1                          10879184 32 +  10971483 CAC-----AAG-A----A-T----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147660342 32 + 156195979 CAC-----AAG-A----A-T----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            12328 32 +     23629 CAC-----AAG-A----A-T----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60609941 31 +  78930452 --C-----AGA-G----A-T----GACATCCGT-AGA-A-AGAATTT-----T-T--G--G
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         36400 30 -     40477 --C-----AAA-A----A-T----AGTATTTGT-AGA-AGGTA------CT-C-C--T--G
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 274264 41 -    399297 CAA-----AAC-A-AAAA-T----AATGTTTGT-AGG-AGGAACTTTATCA-T-C--C--A
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53025437 41 +  72327488 caa-----aag-aaaa-a-c----aatatttgt-aAA-AGGAGCTCTACCA-T-C--C--A
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             15925 31 -     19186 --T-----AGC-A----G-T----TATATTT-T-AGA-AGGACTT----CT-T-T--T--G
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            48586 30 -     70449 --C-----AAG-A----A-T----GGCATTTGT-AGA-ATGC--C--AT---T-T--T--G
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 9 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  204998 30 -    956709 TAC------AG-A----A-T----GACATTTGT-AGA-A---GTT----CT-T-T--T--G
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 27250 34 -     67205 CAA-----AAT-A----C-T----GATATTTGC-AGA-AAGAGTT----CT-T-T--T--C
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          178854 34 -   6883506 CAC-----TAG-A----A-T----GATCTCTGC-AGA-AGTATCT----CT-T-T--T--G
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16841545 34 +  31942871 CAC-----AAG-A----A-C----AACATCTGC-AGA-AGCAGCT----CT-T-T--T--G
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80034005 32 -  96802777 --T-----AGG-A----A-T----GACTCTTGT-AGA-AGGAGCT----CT-C-T--T--G
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18696004 32 -  18957592 --C-----AAA-A----A-T----GACATTTGT-AGA-AGGAGCT----CC-T-T--T--G
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 319137 33 +    993696 --C-----AAG-A----A-C----GACATTTGT-AGA-aggagat----tt-ttt--t--c
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_170113                  395 33 +       818 --C-----AAG-A----A-C----GACATTTGT-AGA-AGGAGATTT-----TTT--T--C
i Diceros_bicornis.DicBicMic_scaffold_170113            C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   154433 29 +    228994 ----------G-A----T-T----GATATTTGC-AGA-AAGAGTT----CT-T-T--T--G
i Dinomys_branickii.DinBra_scaffold_1996                N 0 C 0
s Dipodomys_ordii.KN672545.1                              3652176 31 +   4240102 CCC-----AGA-A----A-T----GACATTTGT-TGT-AA---TC----CT-T-T--T--G
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 23730 31 +     28912 CCC-----AGA-A----A-T----GACATTTGT-TGT-AA---TC----CT-T-T--T--G
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Echinops_telfairi.JH980316.1                           22991275 25 -  44670279 ------------------------TGTATCAGC-AGA-AGGAGCT----CT-T-T--A--G
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                  9387 29 +     24177 --C-----AAG-A----A-T----GACATTTGT-A----GGAGAT----CT-T-T--T--G
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1488700 11 +   1727528 ----------G-A----A-T----GACATTT------------------------------
i Elaphurus_davidianus.JRFZ01086400.1                   I 5 I 1
s Elephantulus_edwardii.JH947210.1                        7803434 32 +  15467074 CAT-----GAG-A----A-C----AGCATTTGA-AAA-AGGGCCT----CT-T-T------
i Elephantulus_edwardii.JH947210.1                      C 0 I 1
s Ellobius_lutescens.LOEQ01003611.1                        235909 41 -    369425 aaa-----aat-aaaa-a-t----aatattttt-aaa-agaaactctaTCT-C-C--C--A
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           2918 41 -      7838 caa-----aat-aaaa-a-t----aatattttt-aaa-agaaactctaCCA-C-C--C--A
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85868302 32 +  99434291 --C-----AAG-A----A-T----GGCATTTGT-AGA-GGGAAAG----CT-T-T--T--G
i Enhydra_lutris.KZ291749.1                             I 9 C 0
s Equus_asinus.JREZ01000062.1                             5849867 32 -   7175178 --C-----AAG-A----A-T----GACATTCGT-AGA-AGGatat----tt-t-t--t--g
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13348370 32 +  41866177 --C-----AAG-A----A-T----GACATTCGT-AGA-AGgatat----tt-t-t--t--g
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                           9860 32 +     92910 --C-----AAG-A----A-T----GACATTCGT-AGA-AGgatat----tt-t-t--t--g
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11529452 30 +  16010500 --GTTGC-AGG-A----A-T----GACATTTGT-GAA-AGGAACC----------------
i Erinaceus_europaeus.JH835290.1                        C 0 I 5
s Erythrocebus_patas.Contig8                             48767289 32 -  48907691 CGC-----AAG-A----A-T----GATGGCTGT-AGA-ATCAAGA-------G-T--T--G
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          312149 32 +    330699 --T-----AGG-A----A-T----GACCCTTGT-AGA-AGGAGTT----CT-C-T--T--G
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             58578 32 +     89355 --T-----AGG-A----A-T----GACCCTTGT-AGA-AGGAGTT----CT-C-T--T--G
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              1744 36 +     13586 CAC-----AAG-A----A-T----GACATCTGT-GGA-AGTAGCT----CT-T-T--TGAG
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               1680 36 -      6809 CAC-----AAG-A----A-T----GACATCTGT-GGA-AGTAGCT----CT-T-T--TGAG
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             8152 36 +     36558 CAC-----AAG-A----A-T----GGCATCTGT-AGA-AGTAGCT----CT-T-T--TGAG
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             4468 36 +     60246 CAC-----AAG-A----A-T----GACATCTGT-GGA-AGTAGCT----CT-T-T--TGAG
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 7956 36 +    109717 CAC-----AAG-A----A-T----GACATCTGT-GGA-AGTAGCT----CT-T-T--TGAG
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               12330 36 +     16540 CAC-----AAG-A----A-T----GACATCTGT-GGA-AGTAGCT----CT-T-T--TGAG
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                12607 36 +     27497 CAC-----AAG-A----A-T----GGCATCTGT-AGA-AGTAGCT----CT-T-T--TGAG
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           15068 36 +     26808 CAC-----AAG-G----A-T----GTCATCTGT-AGA-AGTAGCT----CT-T-T--TGAG
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                29796 36 +     46535 CAC-----AAG-A----A-T----GACATCTGT-GGA-AGTAGCT----CT-T-T--TGAG
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              12519 36 -     29447 CAC-----AAG-A----A-T----GACATCTGT-GGA-AGTAGCT----CT-T-T--TGAG
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129889539 26 - 159252932 --C-----AAG-A----A-T----GGCATTTGT-AGA-AGGAACT----------------
i Felis_catus.CM001386.2                                I 9 I 4
s Felis_catus_fca126.CM031420.1                         129276613 26 - 158578461 --C-----AAG-A----A-T----GGCATTTGT-AGA-AGGAACC----------------
i Felis_catus_fca126.CM031420.1                         I 9 I 4
s Felis_nigripes.FelNig_flattened_line_8080                 17748 26 +     52776 --C-----AAG-G----A-T----GGCATTTGT-AGA-AGGAACT----------------
i Felis_nigripes.FelNig_flattened_line_8080             I 9 I 4
s Fukomys_damarensis.KN123630.1                          13889743 27 -  19261668 CAA-----AAT-A----A-T----GATACTTGT-ATA-AAGAGT-----------------
i Fukomys_damarensis.KN123630.1                         C 0 I 2
s Galago_moholi.ctg555                                     207689 34 -    847004 CAC-----AAG-C----A-T----GGCATCTGT-AGA-AGCGGGT--AT---T-T--T--C
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           10069 34 -     43889 CAC-----AAG-C----A-T----GGCATCTGT-AGA-AGCGGGT--AT---T-T--T--C
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           7118 34 +     27357 CAC-----AAG-C----A-T----GGCATCTGT-AGA-AGCTGGT--AT---T-T--T--C
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               152997 34 +    324696 CAC-----AAG-A----A-C----AATATTTGC-CGA-AGGAGCT----CT-T-T--T--G
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    178212 14 -    189561 --T-----ATG-A----A-T----GACATTT------------------------------
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 4 I 1
s Glis_glis.GliGli_scaffold_79770                            9406 34 -     18683 CAT-----AAG-A----A-A----GATATTTAT-AGA-AAGATGT----CT-T-T--T--G
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               1863 32 -     14630 CAC-----AAG-A----A-T----GATATCTGT-AGA-ATCAGAA-------G-T--T--G
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119648961 32 - 195582420 CAC-----AAG-A----A-T----GATATCTGT-AGA-ATCAGAA-------G-T--T--G
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   73958 34 +    118900 AAC-----AGG-A----A-A----GATATTTAC-AGA-AAGATTT----CT-T-T--T--G
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                         2287 34 +      3980 CAC-----AAG-A----A-T----GACATCTGT-AGA-AGCAGCC----CT-T-T--T--G
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             24767 34 +     26611 CAC-----AAG-A----A-T----GACATCTGT-AGA-AGCAGCC----CT-T-T--T--G
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             2221 34 +     56096 CAC-----AAG-A----A-T----GACATCTGT-AGA-AGCAGCC----CT-T-T--T--G
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        25494 34 -     42470 CAC-----AAG-A----A-T----GACATCTGT-AGA-AGCAGCC----CT-T-T--T--G
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        42091 34 -     54384 CAC-----AAG-A----A-T----GACATCTGT-AGA-AGCAGCC----CT-T-T--T--G
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              13789 32 +     53719 --C-----AAG-A----A-T----GGCATTTGT-AGA-AGGAAAT----CT-T-T--T--G
i Helogale_parvula.HelPar_flattened_line_22962          I 9 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                24698 14 -     91191 --T-----ATG-A----A-T----GACATTT------------------------------
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 4 I 1
s Heterocephalus_glaber.JH602058.1                        2547854 27 +  31725842 CAA-----AAT-A----A-T----GATATTTGT-TGA-AGGAGT-----------------
i Heterocephalus_glaber.JH602058.1                      C 0 I 7
s Heterohyrax_brucei.HetBruBak_scaffold_25354               53272 18 +     73687 CAC-----AAG-A----A-T----GATATTTGT----------------------------
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 I 13
s Hippopotamus_amphibius.HipAmp_scaffold_1308              144265 32 +    277961 --T-----AGG-A----A-C----GACATTTGT-AGA-AGGATCT----CT-T-T--T--G
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      275698 31 -    477199 --C-----AAG-A----A-T----GACATATGT-AG--AGGAGCT----CT-T-C--T--A
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              4852 32 -      9143 --C-----AAG-A----A-T----AACATATGT-AGA-AGGAGCT----CT-T-C--T--A
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg649                                    98533 32 +    115816 CCC-----AAG-A----A-T----GGTATCTG-TAGA-ATCCAAA-------G-T--T--G
i Hoolock_leuconedys.ctg649                                I 25 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 12858 32 -     67322 --C-----AAG-A----A-T----GGCATTTGT-AGA-AGGAACT----CT-T-T--T--G
i Hyaena_hyaena.HyaHya_flattened_line_20729             I 9 C 0
s Hylobates_abbotti.k141_493872                              1670 32 +      5897 CCC-----AAG-A----A-T----GGTCTCTG-TAGA-ATCAAAA-------G-C--T--G
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_282275                                884 32 +      1846 CCC-----AAG-A----A-T----GGTCTCTG-TAGA-ATCAAAA-------G-C--T--G
i Hylobates_agilis.k141_282275                          C 0 C 0
s Hylobates_klossii.k141_584463                                47 32 -      1009 CCC-----AAG-A----A-T----GGTATCTG-TAGA-ATCCAAA-------G-T--T--G
i Hylobates_klossii.k141_584463                         C 0 C 0
s Hylobates_muelleri.k141_1133650                            1105 32 -      2775 CCC-----AAG-A----A-T----GGTATCTG-TAGA-ATCCAAA-------G-T--T--G
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             29707 32 -     60944 CCC-----AAG-A----A-T----GGTCTCTG-TAGA-ATCCAAA-------G-T--T--G
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     2826 34 +     22540 CAA-----AAT-A----A-A----GATATTTGT-AGA-AGGAGTT----CT-T-T--T--G
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7122618 28 +  13083262 TTT-----GAG-A----A-T----GCCATTTAT-AGA-AGGGACT----------------
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 I 4
s Indri_indri.k141_3334527                                   8735 34 +      9207 CAC-----AAG-A----A-G----GACATCTGT-AGA-AACAGCT----CT-T-T--G--G
i Indri_indri.k141_3334527                              C 0 I 1
s Inia_geoffrensis.IniGeo_flattened_line_66725               5932 32 +     17520 --C-----AGG-A----A-T----GACACTTGT-AGA-AGGAGCT----CT-C-T--T--G
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               20764 32 +     37189 --T-----AGG-A----A-T----GACACTTGT-AGA-AGGAGCT----CT-C-T--T--G
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          46583 32 -    147782 CAC-----AAG-A----A-T----GAAATCTGT-GGA-ATCAAAA-------G-T--T--G
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   110881 26 -    115756 --G-----AAT-A----A-T----GACTTTTGT-ATA-AGGCACT----------------
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 I 4
s Lemur_catta.scaffold_1                                258403773 34 - 285822530 CAC-----AAG-A----A-T----GACATCTGT-AGA-AGCAGCC----CT-T-T--T--G
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        20671 34 +     39228 AGC-----AAG-A----A-T----GACATCTGT-AGA-AGCAGCT----CT-T-T--T--G
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            50045 34 +     63517 AGC-----AAG-A----A-T----GACATCTGT-AGA-AGCAGCT----CT-T-T--T--G
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        75267 34 +    116806 AGC-----AAG-A----A-T----GACATCTGT-AGA-AGCAGCT----CT-T-T--T--G
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     28308 34 -     33031 AGC-----AAG-A----A-T----GACATCTGT-AGA-AGCAGCT----CT-T-T--T--G
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3082548 32 -   3498232 --T-----AAG-A----A-C----GGCATTTGT-AGA-AGGAACT----CT-T-T--T--G
i Leptonychotes_weddellii.KB714749.1                    I 9 C 0
s Lepus_americanus.LepAme_scaffold_62849                     9770 32 +     22452 TAT-----AAA-A----A-T----GACATTTGT-AGA-TGTTTCT-------C-T--T--G
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            133107 32 +   3060487 --T-----AGG-A----A-T----GACACTTGT-AGA-AGGAGCT----CT-C-T--T--G
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19244374 32 +  19376315 CGC-----AAG-A----A-T----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            7414 33 +     84689 T-A-----AAG-C----A-T----GGCATCTAT-AGA-AGCAGAT--AT---T-T--T--C
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3775165 33 +   6799190 T-A-----AAG-C----A-T----GGCATCTAT-AGA-AGCAGAT--A-C--T-T--T--C
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20587845 18 -  62548349 TAC-----AAG-A----A-T----GGTATTTGC----------------------------
i Loxodonta_africana.GL010040.1                         C 0 I 13
s Lycaon_pictus.CM007556.1                               11083908 33 +  39895028 --C-----AAGAA----A-T----TGTATTTGT-AGA-AGGAACT----CT-T-T--T--G
i Lycaon_pictus.CM007556.1                              I 9 C 0
s Macaca_arctoides.k141_2201161                             16059 32 +     74745 CAC-----AAG-A----A-T----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12702565 32 +  12821369 CAC-----AAG-A----A-T----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               4661 32 +      6569 CAC-----AAG-A----A-T----GATGTCTGT-AGA-ATCAAGA-------G-T--T--T
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           42962 32 +     63263 CAC-----AAG-A----A-T----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_1068107                               11538 32 +     12679 CAC-----AAG-A----A-T----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                1111 32 +      3017 CAC-----AAG-A----A-T----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  42723 32 -     79256 CAC-----AAG-A----A-T----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196031641 32 + 196197964 CAC-----AAG-A----A-T----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11441747 32 +  11645122 CAC-----AAG-A----A-T----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   1670 32 -     46448 CAC-----AAG-A----A-T----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                1500 32 -      3617 CAC-----AAG-A----A-T----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 11833 32 -     55006 CAC-----AAG-A----A-T----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43836870 32 +  43892939 CAC-----AAG-A----A-T----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                4093 32 -      5978 CAC-----AAG-A----A-T----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               1675 32 -     27140 CAC-----AAG-A----A-T----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43433535 32 -  43563597 CGC-----AAG-A----A-T----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4446361 32 -   4543643 CGC-----AAG-A----A-T----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            143177 30 +    252755 --C-----AAG-A----A-T----GACA--TGC-AGA-AAGAGCT----CT-T-T--G--G
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             33241 32 +     58827 --C-----AAG-A----A-T----GACATTTGC-AGA-AAGAGCT----CT-T-T--G--G
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36870465 28 +  64221397 TAT-----GAG-A----A-T----GCCATTTAT-AGA-AGGGACT----------------
i Marmota_marmota.CZRN01000005.1                        C 0 I 4
s Mellivora_capensis.MelCap_flattened_line_1828            225800 32 -    226874 --C-----AAG-A----A-T----GGCATTTGT-AGA-GGGAAAG----CT-T-T--T--G
i Mellivora_capensis.MelCap_flattened_line_1828         I 9 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233                8366 41 +     15977 CAA-----AAG-A-AAAA-T----AGTATTTGT-AAA-AGGAACTGTAACA-T-C--C--A
i Meriones_unguiculatus.MerUng_scaffold_52233           I 89 C 0
s Mesocricetus_auratus.KB708139.1                         1043173 41 -  26018355 caa-----aag-aaaa-a-c----aatgtttgt-AAA-AGGAACTCTACCA-T-C--C--A
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_183284                    803 32 +      2166 --T-----AGG-A----A-T----GACACTTGT-AGA-AGGAGCT----CT-C-T--T--G
i Mesoplodon_bidens.MesBid_scaffold_183284              C 0 C 0
s Microcebus_murinus.CM007691.1                          16506890 34 +  47401472 CAC-----AAG-A----A-T----GACATCTGT-AGA-AGCAGCT----CT-T-T--T--T
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  28221 25 -     48017 ------------------------TGTATCAGC-AGA-AGGAGCT----CT-T-T--A--G
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               19853 29 -     32043 --C-----AGA-A----A-T----GACATTTGT-A----GGCGCT----CC-T-T--T--G
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22816057 41 -  98408828 caa-----aat-aaa-ca-t----aatattttt-aaa-agcaactctATCA-C-C--C--A
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8206574 29 +  10048721 --C-----AAA-A----A-A----GATATTTGT-AGA-AGGAGCT----CT-G--------
i Miniopterus_natalensis.LDJU01000022.1                 C 0 I 2
s Miniopterus_schreibersii.MinSch_scaffold_24116            31255 29 +     45743 --C-----AAA-A----A-A----GACATTTGT-AGA-AGGAGCT----CT-G--------
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 I 2
s Miopithecus_ogouensis.k141_2666161                        32208 32 +     34273 CGC-----AAG-A----A-T----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         7846 32 -    104932 --T-----AAG-A----A-C----GGCATTTGT-AGA-AGGAACT----CT-T-T--T--G
i Mirounga_angustirostris.MirAng_flattened_line_8852    I 9 C 0
s Mirza_zaza.k141_226143                                     2303 34 +      8497 CAC-----AAG-A----A-T----GACATCTGT-AGA-AGCAGCT----CT-T-T--T--T
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 143530 32 +    154973 --T-----AGG-A----A-T----GACTCTTGT-AGA-AGGAGTT----CT-C-T--T--G
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                158389 32 +    265003 --C-----AAa-a----a-t----aacatttgt-aga-aggagct----tc-t-t--t--g
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 1797 14 -      4346 --T-----ATG-A----A-T----GACATTT------------------------------
i Moschus_moschiferus.MosMos_scaffold_146101            I 4 I 1
s Mungos_mungo.MunMun_flattened_line_8729                  141479 32 -    168139 --C-----AAG-A----A-T----GGCATTTGT-AGA-AGGAAAT----CT-T-T--T--G
i Mungos_mungo.MunMun_flattened_line_8729               I 9 C 0
s Murina_feae.MurFea_scaffold_2254                          16391 29 -    100666 --G-----AAA-A----A-T----GACTTTTGT-AAA-AGGCTCTTT-----T--------
i Murina_feae.MurFea_scaffold_2254                      C 0 I 3
s Mus_caroli.LT608236.1                                  70761923 41 +  92629107 caa-----aag-aaaa-a-t----aacgTTTGT-AGA-AGAAGCCCTACCA-T-T--C--a
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75485047 41 +  98207768 caa-----aag-aaaa-a-t----aacGTTTGT-AGA-AGAAGCCCTAcca-t-t--c--a
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67549363 42 +  89017189 caa-----aaa-aaaaaa-t----aacgttTGT-AGA-AGAAGCCCTAcaa-t-t--c--a
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74324466 41 +  97876770 caa-----aag-aaaa-a-t----aacgTTTGT-AGA-AGAAGCCCTACCA-T-T--C--a
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              7918 28 +     98495 CAC-----AAG-A----A-A----GATATTTAC-AGA-AAGATCT----------------
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 I 5
s Mustela_putorius.JH417978.1                             4420695 32 -  28371801 --C-----AGG-A----A-T----GGCATTTGT-AGA-GGGAAAG----CT-T-T--T--G
i Mustela_putorius.JH417978.1                           I 9 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     86873 34 -    117718 CAA-----AAT-A----T-T----GATATTTGC-AGA-AAGAGTT----CT-T-T--T--G
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               964718 29 +   8389877 --G-----AAA-A----A-T----GACTTTTGT-ATA-AGGCACT----CT-T--------
i Myotis_brandtii.KE161952.1                            C 0 I 3
s Myotis_davidii.KB114863.1                               5016395 29 +   6462685 --g-----aaa-a----A-T----GACTTTTGT-ATA-AGGCACT----CT-T--------
i Myotis_davidii.KB114863.1                             C 0 I 3
s Myotis_lucifugus.GL429887.1                             3462304 29 -   3747815 --G-----AAA-A----A-T----GACTTTTGT-ATA-AGGCACT----CT-T--------
i Myotis_lucifugus.GL429887.1                           C 0 I 3
s Myotis_myotis.MyoMyo_scaffold_6123                         7501 29 +     66751 --G-----AAA-A----A-T----GACTTTTGT-ATA-AGGCACTT----G-T--------
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 I 3
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             2244 36 -      8794 CAC-----TCG-A----A-T----GACATCTGC-AGA-AGTATCT----CT-T-GAAT--C
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nasalis_larvatus.k141_153429                               4572 32 +     48152 CAC-----GAG-A----A-T----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4481447 32 -  14209539 --T-----AAG-A----A-C----GGCATTTGT-AGA-AGGAACT----CT-T-T--T--G
i Neomonachus_schauinslandi.NINY01007774.1              I 9 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3948139 32 -   4490290 --T-----AGG-A----A-T----GACTCTTTT-AGA-AGGAGCT----CT-C-T--T--G
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  46505 32 +     94413 --C-----AAA-A----G-T----GCCATTTGT-AGA-AGGAGCT----CT-T-T--C--A
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1223136                          10339 32 -     11253 CCC-----AAG-A----A-T----GGTATCTGT-AGA-ATCCAAA-------G-T--T--G
i Nomascus_annamensis.k141_1223136                      C 0 C 0
s Nomascus_concolor.k141_190193                               594 32 -      1094 CCC-----AAG-A----A-T----GAAATCTGT-AGA-ATCAAAA-------G-T--T--G
i Nomascus_concolor.k141_190193                         I 62 I 44
s Nomascus_gabriellae.k141_906566                             971 32 -      2544 CCC-----AAG-A----A-T----GGTATCTGT-AGA-ATCCAAA-------G-T--T--G
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             21445 32 -  18771707 CCC-----AAG-A----A-T----GGTATCTGT-AGA-ATCCAAA-------G-T--T--G
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_844529                                   719 32 +      2124 CCC-----AAG-A----A-T----GGTATCTGT-AGA-ATCCAAA-------G-T--T--G
i Nomascus_siki_a.k141_844529                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                26904 32 +   3668941 --C-----AAG-A----A-A----TGTATTTGT-AGA-AGGAACC----CT-T-T--T--G
i Nyctereutes_procyonoides.CAJHUB010000786.1            I 9 C 0
s Nycticebus_bengalensis.LG16                            65563744 33 -  95554990 T-A-----AAA-C----A-T----GGCATCTAT-AGA-AGCAGAT--AT---T-T--T--C
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                             589 33 +      6470 T-A-----AAA-C----A-T----GGCATCTAT-AGA-AGCAGAT--AT---T-T--T--C
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65666113 33 +  89412551 T-A-----AAA-C----A-T----GGCATCTAT-AGA-AGCAGAT--AT---T-T--T--C
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4992431 35 -  23139505 TGC-----AAG-A----ACT----GGCATTTAT-AGA-CATTCCT--A--A-T-T--T--G
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Odobenus_rosmarus.KB229369.1                             676105 32 -   3126709 --T-----AAG-A----A-T----GGCATTTGT-AAA-AAAAGGA----CT-C-T--T--G
i Odobenus_rosmarus.KB229369.1                          I 9 C 0
s Odocoileus_virginianus.KZ101650.1                       1076923 11 +   1425656 ----------G-A----A-T----GACATTT------------------------------
i Odocoileus_virginianus.KZ101650.1                     I 5 I 1
s Okapia_johnstoni.LVCL01S0017931.1                         34084 14 +     78940 --T-----ATG-A----A-T----GACATTT------------------------------
i Okapia_johnstoni.LVCL01S0017931.1                     I 4 I 1
s Ondatra_zibethicus.OndZib_scaffold_6821                  121388 41 +    145789 CAA-----AAT-A-AAAA-T----AATATTTGT-AAA-AGAAACTCTA-CTGC-C--C--A
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  33329 41 +     62360 CAA-----AAG-A-AAAA-T----AATATCTGT-AAA-AGGAGCTCTACCA-C-C--C--A
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7221823 32 -   7562323 --T-----AGG-A----A-T----GTCTCTTGT-AGA-AGGAGCT----CT-C-T--T--G
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              40288 34 -     66828 CAC-----GGG-A----A-T----GGCAATTGC-AGA-AGGAACTTT-----T-T--A--G
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141872419 32 + 163896628 tat-----aaA-A----T-T----GACATTTGT-AGA-AGTTTCT-------C-T--T--G
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      304239 32 -    505867 --C-----AAG-A----A-A----TGTATTTGT-AGA-AGGAACT----CT-T-T--T--G
i Otocyon_megalotis.JAEUCK010005121.1                   I 9 C 0
s Otolemur_crassicaudatus.k141_321880                       35757 34 +     38679 CAC-----AAG-C----A-T----GGCATCTGT-AGA-AGCGGGT--AT---T-T--T--C
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18005198 34 -  38779656 CAC-----AAG-C----A-T----GGCATCTGT-AGA-AGCGGGT--AT---T-T--T--C
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134074500 14 - 275406953 --T-----ATG-A----A-T----GACATTT------------------------------
i Ovis_aries.CM001582.2                                 I 4 I 1
s Ovis_canadensis.OviCan_scaffold_6251                      75714 14 +    140051 --T-----ATG-A----A-T----GACATTT------------------------------
i Ovis_canadensis.OviCan_scaffold_6251                  I 4 I 1
s Pan_paniscus.AJFE02000950.1                                 334 32 -      1008 CAC-----AAG-A----A-T----GATATCTGT-AGA-ATCAAAA-------G-T--T--G
i Pan_paniscus.AJFE02000950.1                           I 26 I 5
s Pan_troglodytes.NBAG03003562.1                             9671 32 +     18198 CAC-----AAG-A----A-T----GATATCTGT-AGA-ATCAAAA-------G-T--T--G
i Pan_troglodytes.NBAG03003562.1                        I 137 I 655
s Panthera_onca.PanOnc_flattened_line_1615                  30702 32 +    295523 --C-----AAG-A----A-T----GGCATTTGT-AGA-AGGAAAT----CT-T-T--T--G
i Panthera_onca.PanOnc_flattened_line_1615              I 9 C 0
s Panthera_pardus.KV860323.1                              3634306 32 +  18214204 --C-----AAG-A----A-T----GGCATTTGT-AGa-aggaaat----ct-t-t--t--g
i Panthera_pardus.KV860323.1                            I 9 C 0
s Panthera_tigris.KE721879.1                              5024083 32 -   6340057 --C-----AAG-A----A-T----GGCATTTGT-AGA-AGGAAAT----CT-T-T--T--G
i Panthera_tigris.KE721879.1                            I 9 C 0
s Pantholops_hodgsonii.KE114631.1                         1063358 14 -   1292953 --T-----ATG-A----A-T----GACATTT------------------------------
i Pantholops_hodgsonii.KE114631.1                       I 4 I 1
s Papio_anubis.CM001492.2                               188152319 32 - 188283584 CGC-----AAG-A----A-T----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            48531 32 +     76494 TGC-----AAG-A----A-T----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47509716 32 +  47705337 CGC-----AAG-A----A-T----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 63698 32 -    104429 CGC-----AAG-A----A-T----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  13484 32 -     29451 CGC-----AAG-A----A-T----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                33887 32 +     35859 CGC-----AAG-A----A-T----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    112035 32 -    135482 --A-----AAG-A----A-T----GGCATTTGT-AGA-AAGAATT----CT-T-T--T--G
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 I 9 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      39718 31 -     45160 TTC-----TGA-A----A-T----GGTATTTGC-TGT-AG---CT----CT-C-T--T--G
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4946504 41 -   8017169 caa-----aag-aaaa-a-t----aacatctgT-AAA-AGGAGCTCTACCA-T-C--C--A
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            118440 32 -    122454 --T-----AGG-A----A-T----GACTCTTGT-AGA-AGGAGCA----CT-C-T--T--G
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           1573 32 -      3310 TAC-----AAG-A----A-T----GATGTCTGC-AGA-ATCAAGA-------G-T--T--G
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       21479 32 -     82327 TAC-----AAG-A----A-T----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           18231 32 +     19957 TAC-----AAG-A----A-T----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26736240 32 +  26888534 TAC-----AAG-A----A-T----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            93491 26 +    112873 --G-----AAA-A----A-T----GGCTTTTGT-AGA-AGGCACT----------------
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 I 6
s Pithecia_albicans.k141_991845                             40083 32 -     61926 CAC-----AAG-A----A-T----GAAATCTGT-AGA-ATCAAAA-------G-T--T--G
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        21512 32 +     78826 CAC-----AAG-A----A-T----GAAATCTGT-AGA-ATCAAAA-------G-T--T--G
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              5463 32 -     15800 CAC-----AAG-A----A-T----GAAATCTGT-AGA-ATCAAAA-------G-T--T--G
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                         8661 32 -     16101 CAC-----AAG-A----A-T----GAAATCTGT-AGA-ATCAAAA-------G-T--T--G
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          1970 32 +      9673 CAC-----AAG-A----A-T----GAAATCTGT-AGA-ATCAAAA-------G-T--T--G
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13470964 32 -  19735023 CAC-----AAG-A----A-T----GAAATCTGT-AGA-ATCAAAA-------G-T--T--G
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                            9872 32 -     31692 CAC-----AAG-A----A-T----GAAATCTGT-AGA-ATCAAAA-------G-T--T--G
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           2507 32 +     21690 --T-----AGG-A----A-T----GACACTTGT-AGA-AGGAGCT----CT-C-T--T--G
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       19264 32 +     44506 CAC-----AAG-A----A-T----GAAATCTGT-AGA-ATCAAAA-------G-T--T--G
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        19482 32 +     67491 CAC-----AAG-A----A-T----GAAATCTGT-AGA-ATCAAAA-------G-T--T--G
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                       9727 32 -     98129 CAC-----AAG-A----A-T----GAAATCTGT-AGA-ATCAAAA-------G-T--T--G
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     19327 32 +    147771 CAC-----AAG-A----A-T----GAAATCTGT-AGA-ATCAAAA-------G-T--T--G
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        19578 32 -     23762 CAC-----AAG-A----A-T----GAAATCTGT-AGA-ATCAAAA-------G-T--T--G
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_2078842                         19526 32 -     19696 CAC-----AAG-A----A-T----GAAATCTGT-AGA-ATCAAAA-------G-T--T--G
i Plecturocebus_dubius.k141_2078842                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         19400 32 +    152463 CAC-----AAG-A----A-T----GAAATCTGT-AGA-ATCAAAA-------G-T--T--G
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      6157 32 +      8943 CAC-----AAG-A----A-T----GAAATCTGT-AGA-ATCAAAA-------G-T--T--G
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                          9117 32 +    134592 CAC-----AAG-A----A-T----GAAATCTGT-AGA-ATCAAAA-------G-T--T--G
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          19710 32 -     75465 CAC-----AAG-A----A-T----GAAATCTGT-AGA-ATCAAAA-------G-T--T--G
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              183757 32 -    373494 AAC-----AAG-A----A-T----GATATTTGT-AGA-ATCAAAA-------G-T--T--G
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19803661 32 +  19899266 CAC-----AAG-A----A-T----GATATTTGT-AGA-ATCAAAA-------G-T--T--G
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               1810 32 -     15069 CAC-----AAG-A----A-T----GATGTCTGT-AGA-ATCAAAA-------G-T--T--G
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              1944 32 +     14865 CAC-----AAG-A----A-T----GATGTCTGT-AGA-ATCAAAA-------G-T--T--G
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                73136 18 +     78963 CAC-----AAG-A----A-T----GATATTTGT----------------------------
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 I 13
s Prolemur_simus.MPIZ01000048.1                           6845147 34 +  12164890 CAC-----AAG-A----A-T----GACATCTGT-AGA-AGCAGCC----CT-T-T--T--G
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     13582 34 -     30946 CAC-----AAG-A----A-T----GACATCTGA-AGA-AGCAGCC----CT-T-T--G--G
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                          288 34 +     11805 CAC-----AAG-A----A-T----GACATCTGA-AGA-AGCAGCT----CT-T-T--G--G
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           39619 34 +     52369 CAC-----AAG-A----A-T----GACATCTGA-AGA-AGCAGCT----CT-T-T--G--G
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         32007 34 -     44753 CAC-----AAG-A----A-T----GACATCTGA-AGA-AGCAGCT----CT-T-T--G--G
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            13929 34 +     27322 CAC-----AAG-A----A-T----GACATCTGA-AGA-AGCAGCT----CT-T-T--G--G
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       13571 34 -     53241 CAC-----AAG-A----A-T----GACATCTGA-AGA-AGCAGCT----CT-T-T--G--G
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         35843 34 -     48185 CAC-----AAG-A----A-T----GACATCTGA-AGA-AGCAGCT----CT-T-T--G--G
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           29429 41 +     77221 gaa-----aag-aaaa-a-t----agtatttgt-AAA-AGGAACTCtaaca-t-c--c--a
i Psammomys_obesus.NESX01026517.1                       I 84 I 471
s Pteronotus_parnellii.KE867983.1                            1053 32 -     27784 --c-----aaa-a----a-t----aacatttat-aga-aGGAGCT----CT-T-T--C--A
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        242567 32 -    344369 --C-----AAG-A----A-T----GGCATTTGT-AGA-GGGAAAG----CT-T-T--T--G
i Pteronura_brasiliensis.PteBra_flattened_line_1343     I 9 C 0
s Pteropus_alecto.KB031157.1                             13243180 32 -  17261082 --C-----AAG-A----A-T----GACATTTGT-AGAA-GGAGAT----CT-T-T--T--G
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             601134 32 -   3946241 --C-----AAG-A----A-T----GACATTTGT-AGAA-GGAGAT----CT-T-T--T--G
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131530899 26 - 161321710 --C-----AAG-A----A-T----GGCATTTGT-AGA-AGGAACT----------------
i Puma_concolor.QAVW01000427.1                          I 9 I 4
s Pygathrix_cinerea.k141_374971                             25934 32 +     56732 CAC-----AAG-A----A-T----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6802424 32 +   6970761 CAC-----AAG-A----A-T----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             1816 32 +     18040 CAC-----AAG-A----A-T----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                13009 11 +     68503 ----------G-A----A-T----GACATTT------------------------------
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 5 I 1
s Rattus_norvegicus.chr11                                13911288 42 +  90463843 caa-----agg-aaaaaa-t----aacgtTTGT-AGA-AGAAGCCCTACCA-T-T--C--a
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1784782 32 +   2252614 --C-----AAG-A----A-T----GACATTTGT-ATA-AGGAGCT----CT-T-T--T--G
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           12372 32 -     14454 CAC-----AAG-A----A-T----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206373698 32 - 206558726 CAC-----AAG-A----A-T----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44851346 32 -  45163003 CAC-----AAG-A----A-T----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                16483 32 +    109198 --C-----AAG-A----A-C----AACATTTGT-AGAA-GGAAAT----CT-T-T--G--G
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       4786 14 +     12214 --T-----ATG-A----A-T----GACATTT------------------------------
i Saiga_tatarica.SaiTat_scaffold_82192                  I 4 I 1
s Saimiri_boliviensis.NW_024100938.1                     15669135 32 -  43202129 CAC-----AAG-A----T-T----GAAATCTGT-AGA-ATCAAAA-------G-T--T--G
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        1010 32 +     34089 CAC-----AAG-A----T-T----GAAATCTGT-AGA-ATCAAAA-------G-T--T--G
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                               941 32 -     60842 CAC-----AAG-A----T-T----GAAATCTGT-AGA-ATCAAAA-------G-T--T--G
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              1010 32 +     67014 CAC-----AAG-A----T-T----GAAATCTGT-AGA-ATCAAAA-------G-T--T--G
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              1010 32 +     60816 CAC-----AAG-A----T-T----GAAATCTGT-AGA-ATCAAAA-------G-T--T--G
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                  938 32 -     76454 CAC-----AAG-A----T-T----GAAATCTGT-AGA-ATCAAAA-------G-T--T--G
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17337518 32 -  30362882 CAC-----AAG-A----T-T----GAAATCTGT-AGA-ATTAAAA-------G-T--T--G
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         17119 32 -     62485 CAC-----AAG-A----T-T----GAAATCTGT-AGA-ATTAAAA-------G-T--T--G
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   28537 31 -    114521 --C-----AGG-G----A-T----GACATCTGT-AGA-A-GGAATTT-----T-T--T--G
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1527475                       24359 32 +     26421 CAC-----AAG-A----A-T----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       4820 32 +     20762 CAC-----AAG-A----A-T----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         38554 32 +     40653 CAC-----AAG-A----A-T----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                            9112 32 -     12194 CAC-----AAG-A----A-T----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     22532 32 -     27512 CAC-----AAG-A----A-T----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         31553 32 -     33692 CAC-----AAG-A----A-T----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   94578 38 -    120886 CAA-----AAG-A-AAAA-T----AGTACTTGT-AAA-ATGAGTT--AT-A-A-C--C--A
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            14779 32 +    739146 --A-----AGG-A----G-T----GACATTTGT-AGA-ATGAGGT----CT-T-T--T--A
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2236542 28 +   2842873 TAT-----GAG-A----A-T----GCCATTTAT-AGA-AGGGACT----------------
i Spermophilus_dauricus.KZ294190.1                      C 0 I 4
s Spilogale_gracilis.SpiGra_flattened_line_905             231565 30 -    276980 --T-----AAG-A----A-T----GGAATTTGT-AGA-GGGAA------CT-T-T--T--G
i Spilogale_gracilis.SpiGra_flattened_line_905          I 9 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            24146 32 +     62062 --C-----AAG-A----A-T----GGCATTTGT-AGA-AGGAAAT----CT-T-T--T--G
i Suricata_suricatta.SurSur_flattened_line_20339        I 9 C 0
s Sus_scrofa.CM000824.4                                 189269070 35 + 218635234 --ATCACCAAA-A----A-T----GGCATTTGT-AGA-AGCGGCT----CT-T-G------
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                     13898504 32 +  13920577 CCC-----AAG-A----A-T----GGTATCTGT-AGA-ATCCAAA-------G-T--T--G
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               2986 32 -      6213 --C-----AAA-A----A-T----GACATTTAT-AGA-AGGAGCT----CT-T-T--T--C
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               11921 32 +     45698 CAC-----TCG-A----A-T----GACATTTGC-AGA-AGTATCT----CT-T-A------
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      803929 32 +   1148477 --C-----GAG-A----A-T----GACATTTGT-AGA-AGGAGATTT-----T-T--T--G
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  54591 26 +     99546 --C-----AAG-A----A-T----GACATTTGT-AGA-AGGAGAT----------------
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 I 4
s Tarsius_lariang.k141_609102                               23273 34 +     42269 CAC-----AGG-A----A-T----AATATCTGT-ATG-AGCAGCT----CT-T-T--T--G
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               56587 34 +     65473 CAC-----AGG-A----A-T----AGTATCTGT-ATG-AGCAGCT----CT-T-T--T--G
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194003854 32 - 194193292 CGC-----AAG-A----A-T----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                   774 32 +      6782 CAC-----TTG-A----A-T----GACATTTGC-AGA-AGTATC-T------T-T--T--G
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  133066 29 -    259118 --C-----AAA-A----A-T----GGCATTTGT-A----GGAGCT----CC-T-T--T--G
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        22930 32 +     38948 CAC-----AAG-A----A-T----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   16657 32 -     32910 CAC-----AAG-A----A-T----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       22555 32 +     24652 CAC-----AAG-A----A-T----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      1440 32 -      3559 CAC-----AAG-A----A-T----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           39379 32 -     54611 CAC-----AAG-A----A-T----GATGGCTGT-AGA-ATCAAGA-------G-T--T--G
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       15378 32 +     17312 CAC-----AAG-A----A-T----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    22748 32 -     25040 CAC-----AAG-A----A-T----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          1414 32 +      3528 CAC-----AAG-A----A-T----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  47776 32 +     51589 CAC-----AAG-A----A-T----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       10944 32 +     14732 CAC-----AAG-A----A-T----GATGCCTGT-AGA-ATCAAGA-------G-T--T--G
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       1422 32 -     28054 CAC-----AAG-A----A-T----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44656217 32 -  44834318 CAC-----AAG-A----A-T----GATGTCTGT-AGA-ATCAAGA-------G-T--T--G
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        1227 32 +      3372 CAC-----AAG-A----A-T----GATGGCTGT-AGA-ATCAAGA-------G-T--T--G
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   2426 14 +     90398 --T-----AGG-A----A-T----GCCATTT------------------------------
i Tragulus_javanicus.TraJav_scaffold_14717              I 4 I 1
s Trichechus_manatus.JH594618.1                          16078517 18 +  31416278 CAC-----AAG-A----A-T----GGTATTTGT----------------------------
i Trichechus_manatus.JH594618.1                         C 0 I 13
s Tupaia_chinensis.KB320831.1                             2788358 32 -   3938065 CAC-----AAG-A----A-A----GACAT--GC-TTA-AGGAGCTTT-----T-T--T--G
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                     919 32 +     13056 CAC-----AAG-A----A-A----GACAT--GC-TTA-AGGAGCTTT-----T-T--T--G
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69310541 32 -  96451834 --T-----AGG-A----A-T----GACTCTTGT-AGA-AGGAGCT----CT-C-T--T--G
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 23742 31 -     25548 --T-----CAG-A----A-T----GACATTTGT-AGG-G-GAGCTTT-----T-C--T--G
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6511155 32 +  28682327 --C-----AAG-A----A-T----GGCATTTGT-AGA-GGGAACTGT-----T-T--T--G
i Ursus_maritimus.KK498671.1                            I 9 C 0
s Varecia_rubra.k141_432109                                  2086 34 -     20643 CAA-----AAG-A----A-T----GACATCTAT-AGA-AGCAGCT----CT-T-T--T--G
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             21631 34 -     33872 CAA-----AAG-A----A-T----GACATCTAT-AGA-AGCAGCT----CT-T-T--T--G
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1521859 36 -   2331223 --C-----AAG-A----A-TGGTAGAAACTTTT-AGA-AGGAGCT----CT-T-C--T--G
i Vicugna_pacos.KN269600.1                              I 4 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                134309 32 -    281493 --C-----AAG-A----A-A----TGTATTTGT-AGA-AGGAACT----CT-T-T--T--G
i Vulpes_lagopus.VulLag_flattened_line_2045             I 9 C 0
s Xerus_inauris.XerIna_scaffold_7898                       123635 28 -    134049 CAC-----AGT-A----A-T----GCCATCTAT-AGG-AGGAGCT----------------
i Xerus_inauris.XerIna_scaffold_7898                    C 0 I 4
s Zalophus_californianus.ZalCal_flattened_line_4097        210833 33 -    227762 --T-----AAG-A----A-T----GGCATTTGT-AAAAAAGGACT----CT-T-T--T--G
i Zalophus_californianus.ZalCal_flattened_line_4097     I 9 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           4044 32 -      8775 --T-----AGG-A----A-T----GACACTTGT-AGA-AGGAGCT----CT-C-T--T--G
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_141308              5680 150 -     12508 I
e Megaderma_lyra.MegLyr_scaffold_3562                       61508  0 -    234502 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16291  1 -    119109 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     12283  2 -     20485 I
e Jaculus_jaculus.JH725517.1                              8561873  2 +  11848649 I
e Allactaga_bullata.AllBul_scaffold_70162                    8911  2 -     22067 I
e Perodicticus_potto.k141_713187                            21218  0 -     27972 C
e Perodicticus_ibeanus.k141_117958                           1921  0 -     23713 C
e Octodon_degus.JH651621.1                                3675582 26 +  10294119 I
e Nannospalax_galili.KL201303.1                            107449  0 +    362372 C
e Dolichotis_patagonum.DolPat_scaffold_14102                33375  0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             56104 16 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                14631 16 +     26546 I
e Cavia_tschudii.CavTsc_scaffold_488                       173989  0 +    436027 C
e Cavia_porcellus.DS562889.1                             15795798  0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15783848 16 -  24422027 I

a score=0.000000
s hg38.chr4_GL000008v2_random                                8500  5 +    209709 A-A------AT-C
s Acinonyx_jubatus.LLWD01000356.1                         2030589  6 +   3721120 A-A------ATTC
i Acinonyx_jubatus.LLWD01000356.1                       I 4 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    108861  5 -    189883 A-A------AT-T
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 9 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10653912  6 +  23371972 A-A------ATTC
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7090612  6 -  16596857 C-A------ATTC
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allenopithecus_nigroviridis.k141_3103707                  59524  5 +     61638 A-A------AT-C
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        51332  5 +     53391 A-A------AT-C
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         2056  5 +     72529 A-A------AT-C
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          1632  5 +      3797 A-A------AT-C
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             6722  5 -     18050 A-A------AT-C
i Alouatta_belzebul.k141_1818029                        C 0 I 133
s Alouatta_caraya.k141_5460                                  7839  5 -     11521 A-A------AT-C
i Alouatta_caraya.k141_5460                             C 0 I 129
s Alouatta_discolor.k141_811576                              7397  5 -     21359 A-A------AT-C
i Alouatta_discolor.k141_811576                         C 0 I 133
s Alouatta_juara.k141_1856473                                5780  5 +      7227 A-A------AT-C
i Alouatta_juara.k141_1856473                           C 0 I 131
s Alouatta_macconnelli.k141_1331706                          6694  5 -     10438 A-A------AT-C
i Alouatta_macconnelli.k141_1331706                     C 0 I 131
s Alouatta_nigerrima.k141_2718643                            3349  5 +      7047 A-A------AT-C
i Alouatta_nigerrima.k141_2718643                       C 0 I 131
s Alouatta_palliata.k141_1316127                             6633  5 +     10410 A-A------AT-C
i Alouatta_palliata.k141_1316127                        C 0 I 134
s Alouatta_puruensis.k141_1374428                             436  5 -     25526 A-A------AT-C
i Alouatta_puruensis.k141_1374428                       C 0 n 0
s Alouatta_seniculus.k141_990213                             3354  5 +      6429 A-A------AT-C
i Alouatta_seniculus.k141_990213                        C 0 I 131
s Ammotragus_lervia.NIVO01013474.1                        3517344  6 +   4113121 A-A------ATTC
i Ammotragus_lervia.NIVO01013474.1                      I 1 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      387544  6 -    631301 A-A------ATTC
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            27977  6 +     33004 A-A------ATTC
i Antilocapra_americana.AntAmePen_scaffold_42841        I 1 C 0
s Aotus_azarae.k141_3170768                                 59028  5 +     78111 A-A------AT-C
i Aotus_azarae.k141_3170768                             C 0 I 156
s Aotus_griseimembra.k141_3275623                            1959  5 +     22701 A-A------AT-C
i Aotus_griseimembra.k141_3275623                       C 0 I 155
s Aotus_nancymaae.KZ196176.1                              5745919  5 +   9889416 A-a------at-c
i Aotus_nancymaae.KZ196176.1                            C 0 I 153
s Aotus_trivirgatus.k141_1740727                             2511  5 -    104377 A-A------AT-C
i Aotus_trivirgatus.k141_1740727                        C 0 I 142
s Aotus_vociferans.k141_718647                               2511  5 +     23246 A-A------AT-C
i Aotus_vociferans.k141_718647                          C 0 I 151
s Aplodontia_rufa.AprRuf_scaffold_156013                      528  5 +      5067 A-A------AT-T
i Aplodontia_rufa.AprRuf_scaffold_156013                I 4 C 0
s Arctocebus_calabarensis.k141_1161114                      14661  6 +     17483 AAG------AA-T
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 5645  6 -     29036 A-A------ATTT
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9535772  5 +  39197703 T-A------AT-C
i Ateles_geoffroyi_b.tarseq_2582                           C 0 I 153
s Ateles_belzebuth.k141_1348307                             57060  5 +     85812 A-A------AT-C
i Ateles_belzebuth.k141_1348307                         C 0 I 150
s Ateles_chamek.k141_1072810                                 8057  5 +     89302 A-A------AT-C
i Ateles_chamek.k141_1072810                            C 0 I 152
s Ateles_geoffroyi_a.k141_1300742                             12566  5 -     58268 T-A------AT-C
i Ateles_geoffroyi_a.k141_1300742                         C 0 I 152
s Ateles_marginatus.k141_899112                             60554  5 +    119057 A-A------AT-C
i Ateles_marginatus.k141_899112                         C 0 I 151
s Ateles_paniscus.k141_1631200                               2504  5 -     25888 A-A------AT-C
i Ateles_paniscus.k141_1631200                          C 0 I 152
s Avahi_laniger.k141_2840928                                 3371  5 -     16375 A-G------AG-T
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_767228                               9343  5 -      9688 A-G------AG-T
i Avahi_peyrierasi.k141_767228                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26377297  6 +  51448160 A-A------ATCC
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        2528  6 -     13118 A-A------ATCC
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   40444  6 -     72089 A-A------ATTC
i Beatragus_hunteri.BeaHun_scaffold_21644               I 1 C 0
s Bison_bison.KN264915.1                                  6556591  6 +   6870073 A-A------ATTC
i Bison_bison.KN264915.1                                I 1 C 0
s Bos_indicus.CM003021.1                                138136822  6 - 161108492 A-A------ATTC
i Bos_indicus.CM003021.1                                I 1 C 0
s Bos_mutus.JH883513.1                                     569200  6 -    998990 A-A------ATTC
i Bos_mutus.JH883513.1                                  I 1 C 0
s Bos_taurus.CM000177.6                                 136292555  6 - 158972876 A-A------ATTC
i Bos_taurus.CM000177.6                                 I 1 C 0
s Bubalus_bubalis.KI419065.1                              1228176  6 -   1914593 A-A------ATTC
i Bubalus_bubalis.KI419065.1                            I 1 C 0
s Cacajao_ayresi.k141_724503                               110402  5 -    171031 A-A------AT-C
i Cacajao_ayresi.k141_724503                            C 0 I 157
s Cacajao_calvus.k141_96166                                  9428  5 +    125063 A-A------AT-C
i Cacajao_calvus.k141_96166                             C 0 I 157
s Cacajao_hosomi.k141_303789                                11476  5 -    216513 A-A------AT-C
i Cacajao_hosomi.k141_303789                            C 0 I 157
s Cacajao_melanocephalus.k141_1160263                        4015  5 -    134917 A-A------AT-C
i Cacajao_melanocephalus.k141_1160263                   C 0 I 158
s Camelus_bactrianus.KN276303.1                           3216814  6 -   8989139 A-A------ATTC
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           394515  6 -  15254737 A-A------ATTC
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2970252  6 +   6889770 A-A------ATTC
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11515297  6 +  39901454 A-A------ATTC
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   10314  6 +     87036 A-A------ATTC
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11261956  6 -  35597290 A-A------ATTC
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11084485  6 +  39895921 A-A------ATTC
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16451519  6 -  44759192 A-A------ATTC
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21322451  6 + 157394656 A-A------ATTC
i Capra_aegagrus.CM003214.1                             I 1 C 0
s Capra_hircus.CM004562.1                               135703678  6 - 157403528 A-A------ATTC
i Capra_hircus.CM004562.1                               I 1 C 0
s Capromys_pilorides.CapPil_scaffold_647363                  1215  2 +      1887 G-A----------
i Capromys_pilorides.CapPil_scaffold_647363             C 0 I 26
s Carlito_syrichta.NW_007248099.1                          305816  5 +    345090 A-A------AT-T
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               56721  6 +     67245 A-A------ATTC
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   27228  5 +     33760 A-T------AT-T
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   156036  6 -    276539 A-A------ATTC
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18887241  5 -  29618158 A-A------AT-C
i Cebus_albifrons.Contig22                              C 0 I 158
s Cebus_olivaceus.k141_93739                                 4787  5 -     26817 A-A------AT-C
i Cebus_olivaceus.k141_93739                            C 0 I 156
s Cebus_unicolor.k141_239009                                 9027  5 +     25043 A-A------AT-C
i Cebus_unicolor.k141_239009                            C 0 I 159
s Cephalopachus_bancanus.k141_702587                         4865  5 +     21754 A-A------AT-T
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4360508  6 +   7569818 a-a------attt
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623          263  6 -      9338 A-A------ATTT
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6551319  5 +   6739814 A-A------AT-C
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      52796  5 -     54931 A-A------AT-C
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         17780  5 -     19697 A-A------AT-C
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         55311  5 -    107033 A-A------AT-C
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        1753  5 -      3853 A-A------AT-C
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          25686  5 +     30494 A-A------AT-C
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           1710  5 -      4022 A-A------AT-C
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          1603  5 -      3505 A-A------AT-C
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           20407  5 +     35983 A-A------AT-C
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11986929  5 +  12117833 A-A------AT-C
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46473682  5 +  46592721 A-A------AT-C
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      31509  5 +     33420 A-A------AT-C
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        1545  5 -      3443 A-A------AT-C
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      2536  5 -      4669 A-A------AT-C
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        2336  5 -      4411 A-A------AT-C
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         1861  5 -      4205 A-A------AT-C
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_1070855            83  5 -      1715 A-A------AT-T
i Chaetophractus_vellerosus.ChaVel_scaffold_1070855     C 0 I 8
s Cheirogaleus_major.k141_1157592                           55708  5 -     68416 A-G------AG-T
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            4757  5 +     13308 A-G------AG-T
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             2040  5 -     18223 A-A------AT-C
i Cheracebus_lucifer.k141_619653                        C 0 I 162
s Cheracebus_lugens.k141_203936                             19063  5 +     25473 A-A------AT-C
i Cheracebus_lugens.k141_203936                         C 0 I 162
s Cheracebus_regulus.k141_2128895                           38102  5 +     57117 A-A------AT-C
i Cheracebus_regulus.k141_2128895                       C 0 I 162
s Cheracebus_torquatus.k141_315545                          42777  5 +     54541 A-A------AT-C
i Cheracebus_torquatus.k141_315545                      C 0 I 162
s Chinchilla_lanigera.JH721867.1                         15958594  2 +  43084221 A-A----------
i Chinchilla_lanigera.JH721867.1                        C 0 I 20
s Chiropotes_israelita.k141_1189915                         67623  5 +    196370 A-A------AT-C
i Chiropotes_israelita.k141_1189915                     C 0 I 157
s Chiropotes_sagulatus.k141_773804                          11798  5 +     40510 A-A------AT-C
i Chiropotes_sagulatus.k141_773804                      C 0 I 163
s Chlorocebus_aethiops.ctg22                             15135142  5 -  15256731 A-A------AT-C
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      30188  5 -     53260 A-A------AT-C
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101140637  5 + 101219884 A-A------AT-C
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                13703  5 -     21363 A-A------AT-T
i Choloepus_didactylus.ChoDid_scaffold_36182            I 1 I 11
s Choloepus_hoffmanni.KN194586.1                           759009  5 +    964067 A-A------AT-T
i Choloepus_hoffmanni.KN194586.1                        I 1 I 11
s Colobus_angolensis.KN985967.1                          10879216  5 +  10971483 A-A------AT-C
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147660374  5 + 156195979 A-A------AT-C
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            12360  5 +     23629 A-A------AT-C
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60609972  4 +  78930452 A-A------AT--
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         36430  6 -     40477 A-A------ATTC
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 274305  5 -    399297 A-A------AT-T
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53025478  5 +  72327488 A-A------TT-T
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             15956  4 -     19186 A-A------AT--
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            48616  6 -     70449 A-A------ATTC
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  205028  5 -    956709 A-A------AT-T
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 27284  2 -     67205 A-A----------
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          178888  5 -   6883506 A-A------AT-T
i Dasypus_novemcinctus.JH568778.1                       C 0 I 14
s Daubentonia_madagascariensis.ctg11                     16841579  5 +  31942871 A-G------AG-T
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80034037 12 -  96802777 A-AATTGAAATCC
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18696036  6 -  18957592 A-A------ATTC
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 319170  6 +    993696 a-a------attt
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_170113                  428  6 +       818 A-A------ATTT
i Diceros_bicornis.DicBicMic_scaffold_170113            C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   154462  2 +    228994 A-A----------
i Dinomys_branickii.DinBra_scaffold_1996                C 0 I 20
s Dipodomys_ordii.KN672545.1                              3652207  5 +   4240102 A-A------AT-T
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 23761  5 +     28912 A-A------AT-T
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Echinops_telfairi.JH980316.1                           22991300  5 -  44670279 A-A------AT-T
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                  9416  6 +     24177 A-A------ATTC
i Eidolon_helvum.KE772537.1                             C 0 I 8
s Elaphurus_davidianus.JRFZ01086400.1                     1488712  6 +   1727528 A-A------ATTC
i Elaphurus_davidianus.JRFZ01086400.1                   I 1 C 0
s Elephantulus_edwardii.JH947210.1                        7803467  5 +  15467074 A-A------AT-T
i Elephantulus_edwardii.JH947210.1                      I 1 C 0
s Ellobius_lutescens.LOEQ01003611.1                        235950  5 -    369425 A-A------TT-T
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           2959  5 -      7838 A-A------TT-T
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85868334  6 +  99434291 A-A------GTTC
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Equus_asinus.JREZ01000062.1                             5849899  6 -   7175178 g-a------attt
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13348402  6 +  41866177 g-a------attt
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                           9892  6 +     92910 g-a------attt
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11529487  4 +  16010500 T-A------TA--
i Erinaceus_europaeus.JH835290.1                        I 5 C 0
s Erythrocebus_patas.Contig8                             48767321  5 -  48907691 A-A------AT-C
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          312181  6 +    330699 A-A------ATCC
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             58610  6 +     89355 A-A------ATCC
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              1780  5 +     13586 A-G------AG-T
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               1716  5 -      6809 A-G------AG-T
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             8188  5 +     36558 A-G------AG-T
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             4504  5 +     60246 A-G------AG-T
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 7992  5 +    109717 A-G------AG-T
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               12366  5 +     16540 A-G------AG-T
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                12643  5 +     27497 A-G------AG-T
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           15104  5 +     26808 A-G------AG-T
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                29832  5 +     46535 A-G------AG-T
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              12555  5 -     29447 A-G------AG-T
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129889569  6 - 159252932 A-A------ATTC
i Felis_catus.CM001386.2                                I 4 C 0
s Felis_catus_fca126.CM031420.1                         129276643  6 - 158578461 A-A------ATTC
i Felis_catus_fca126.CM031420.1                         I 4 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 17778  6 +     52776 A-A------ATTC
i Felis_nigripes.FelNig_flattened_line_8080             I 4 C 0
s Fukomys_damarensis.KN123630.1                          13889772  5 -  19261668 A-A------AT-T
i Fukomys_damarensis.KN123630.1                         I 2 I 22
s Galago_moholi.ctg555                                     207723  5 -    847004 A-G------AG-T
i Galago_moholi.ctg555                                  C 0 I 1
s Galago_senegalensis.k141_964197                           10103  5 -     43889 A-G------AG-T
i Galago_senegalensis.k141_964197                       C 0 I 1
s Galagoides_demidoff.k141_1769638                           7152  5 +     27357 A-G------AG-T
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               153031  5 +    324696 A-A------AT-T
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    178227  6 -    189561 A-A------ATTC
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 1 C 0
s Glis_glis.GliGli_scaffold_79770                            9440  5 -     18683 A-A------AT-T
i Glis_glis.GliGli_scaffold_79770                       C 0 I 18
s Gorilla_beringei.k141_111300                               1895  5 -     14630 A-A------AT-C
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119648993  5 - 195582420 A-A------AT-C
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   73992  5 +    118900 A-A------AT-T
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 I 1
s Hapalemur_alaotrensis.k141_1198205                         2321  5 +      3980 A-G------AG-T
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             24801  5 +     26611 A-A------AG-T
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             2255  5 +     56096 A-A------AG-T
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        25528  5 -     42470 A-A------AG-T
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        42125  5 -     54384 A-A------AG-T
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              13821  6 +     53719 A-A------ATTC
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                24713  6 -     91191 A-A------ATTC
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 1 C 0
s Heterocephalus_glaber.JH602058.1                        2547888  5 +  31725842 A-A------GT-T
i Heterocephalus_glaber.JH602058.1                      I 7 I 40
s Heterohyrax_brucei.HetBruBak_scaffold_25354               53303  5 +     73687 A-A------GT-T
i Heterohyrax_brucei.HetBruBak_scaffold_25354           I 13 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              144297  6 +    277961 A-A------ATTC
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      275729  6 -    477199 A-A------ATTT
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              4884  6 -      9143 A-A------ATTT
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg649                                    98565  5 +    115816 A-A------AT-C
i Hoolock_leuconedys.ctg649                                C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 12890  6 -     67322 A-A------ATTT
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hylobates_abbotti.k141_493872                              1702  5 +      5897 A-A------AT-C
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_282275                                916  5 +      1846 A-A------AT-C
i Hylobates_agilis.k141_282275                          C 0 I 39
s Hylobates_klossii.k141_584463                                79  5 -      1009 A-A------AT-C
i Hylobates_klossii.k141_584463                         C 0 C 0
s Hylobates_muelleri.k141_1133650                            1137  5 -      2775 A-A------AT-G
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             29739  5 -     60944 A-A------AT-C
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     2860  5 +     22540 A-A------AT-T
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7122650  5 +  13083262 A-T------AT-C
i Ictidomys_tridecemlineatus.JH393315.1                 I 4 C 0
s Indri_indri.k141_3334527                                   8770  5 +      9207 A-G------AG-T
i Indri_indri.k141_3334527                              I 1 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               5964 12 +     17520 A-AATTGAAATCC
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               20796 12 +     37189 A-AATTGAAATCC
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          46615  5 -    147782 A-A------AT-C
i Lagothrix_lagothricha.k141_12968                      C 0 I 164
s Lasiurus_borealis.LasBor_scaffold_5102                   110911  6 -    115756 A-A------ATTC
i Lasiurus_borealis.LasBor_scaffold_5102                I 4 C 0
s Lemur_catta.scaffold_1                                258403807  5 - 285822530 A-G------AG-T
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        20705  5 +     39228 A-G------AG-T
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            50079  5 +     63517 A-G------AG-T
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        75301  5 +    116806 A-G------AG-T
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     28342  5 -     33031 A-G------AG-T
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3082580  6 -   3498232 A-A------ATTC
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                     9802  5 +     22452 A-A------AA-T
i Lepus_americanus.LepAme_scaffold_62849                C 0 I 1
s Lipotes_vexillifer.KE558548.1                            133139 12 +   3060487 A-AATTGCAATCC
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19244406  5 +  19376315 A-A------AT-C
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            7447  5 +     84689 A-G------AG-T
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3775198  5 +   6799190 A-G------AG-T
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20587876  5 -  62548349 A-A------GT-T
i Loxodonta_africana.GL010040.1                         I 13 C 0
s Lycaon_pictus.CM007556.1                               11083941  6 +  39895028 A-A------ATTC
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             16091  5 +     74745 A-A------AT-C
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12702597  5 +  12821369 A-A------AT-C
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               4693  5 +      6569 A-A------AT-C
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           42994  5 +     63263 A-A------AT-C
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_1068107                               11570  5 +     12679 A-A------AT-C
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                1143  5 +      3017 A-A------AT-C
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  42755  5 -     79256 A-A------AT-C
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196031673  5 + 196197964 A-A------AT-C
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11441779  5 +  11645122 A-A------AT-C
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   1702  5 -     46448 A-A------AT-C
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                1532  5 -      3617 A-A------AT-C
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 11865  5 -     55006 A-A------AT-C
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43836902  5 +  43892939 A-A------AT-C
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                4125  5 -      5978 A-A------AT-C
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               1707  5 -     27140 A-A------AT-C
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43433567  5 -  43563597 A-A------AT-C
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4446393  5 -   4543643 A-A------AT-C
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            143207  6 +    252755 A-A------GTTT
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             33273  6 +     58827 A-A------GTTT
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36870497  5 +  64221397 A-A------AT-C
i Marmota_marmota.CZRN01000005.1                        I 4 C 0
s Mellivora_capensis.MelCap_flattened_line_1828            225832  6 -    226874 A-A------GTTC
i Mellivora_capensis.MelCap_flattened_line_1828         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233                8407  5 +     15977 A-A------AT-T
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1043214  5 -  26018355 A-A------TT-T
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_183284                    835 12 +      2166 A-AATTGAAATCC
i Mesoplodon_bidens.MesBid_scaffold_183284              C 0 C 0
s Microcebus_murinus.CM007691.1                          16506924  5 +  47401472 A-G------AG-T
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  28246  5 -     48017 A-A------AT-T
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               19882  6 -     32043 A-A------ATTC
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22816098  5 -  98408828 A-A------TT-T
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8206605  6 +  10048721 G-A------ATTC
i Miniopterus_natalensis.LDJU01000022.1                 I 2 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            31286  6 +     45743 G-A------ATTC
i Miniopterus_schreibersii.MinSch_scaffold_24116        I 2 C 0
s Miopithecus_ogouensis.k141_2666161                        32240  5 +     34273 A-A------AT-T
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         7878  6 -    104932 A-A------ATTC
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     2337  5 +      8497 A-G------AG-T
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 143562 12 +    154973 A-AATTGAAATCC
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                158421  6 +    265003 a-a------attc
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 1812  6 -      4346 A-A------ATTC
i Moschus_moschiferus.MosMos_scaffold_146101            I 1 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  141511  6 -    168139 A-A------ATTC
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          16423  6 -    100666 A-A------ACTC
i Murina_feae.MurFea_scaffold_2254                      I 3 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              7951  5 +     98495 A-A------AC-T
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 5 I 1
s Mustela_putorius.JH417978.1                             4420727  6 -  28371801 A-A------GTTC
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     86907  2 -    117718 G-C----------
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 I 26
s Myotis_brandtii.KE161952.1                               964750  6 +   8389877 A-A------ATTC
i Myotis_brandtii.KE161952.1                            I 3 C 0
s Myotis_davidii.KB114863.1                               5016427  6 +   6462685 A-A------ATTC
i Myotis_davidii.KB114863.1                             I 3 C 0
s Myotis_lucifugus.GL429887.1                             3462336  6 -   3747815 A-A------ATTC
i Myotis_lucifugus.GL429887.1                           I 3 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         7533  6 +     66751 A-A------ATTC
i Myotis_myotis.MyoMyo_scaffold_6123                    I 3 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             2280  5 -      8794 A-A------AT-T
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 I 11
s Nasalis_larvatus.k141_153429                               4604  5 +     48152 A-A------AT-C
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4481479  6 -  14209539 A-A------ATTC
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3948171 12 -   4490290 A-AATTGAAATCC
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  46537  6 +     94413 A-A------ATTC
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1223136                          10371  5 -     11253 A-A------AT-C
i Nomascus_annamensis.k141_1223136                      C 0 C 0
s Nomascus_concolor.k141_468488                              1014  5 -      1482 A-A------AT-C
i Nomascus_concolor.k141_468488                         I 32 C 0
s Nomascus_gabriellae.k141_906566                            1003  5 -      2544 A-A------AT-C
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             21477  5 -  18771707 A-A------AT-C
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_844529                                   751  5 +      2124 A-A------AT-C
i Nomascus_siki_a.k141_844529                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                26936  6 +   3668941 A-A------ATTC
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65563777  5 -  95554990 A-G------AG-T
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                             622  5 +      6470 A-G------AG-T
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65666146  5 +  89412551 A-G------AG-C
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4992466  5 -  23139505 A-A------AA-T
i Ochotona_princeps.JH802095.1                          C 0 I 1
s Odobenus_rosmarus.KB229369.1                             676137  6 -   3126709 A-A------ATTC
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1076935  6 +   1425656 A-A------ATTC
i Odocoileus_virginianus.KZ101650.1                     I 1 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         34099  6 +     78940 A-A------ATGC
i Okapia_johnstoni.LVCL01S0017931.1                     I 1 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  121429  5 +    145789 A-A------TT-T
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  33370  5 +     62360 A-A------TT-T
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7221855 12 -   7562323 A-AATTGAAATCC
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              40322  5 -     66828 A-A------AT-T
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141872451  5 + 163896628 A-A------AA-T
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      304271  6 -    505867 A-A------ATTC
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       35791  5 +     38679 A-G------AG-T
i Otolemur_crassicaudatus.k141_321880                   C 0 I 1
s Otolemur_garnettii.GL873528.1                          18005232  5 -  38779656 A-G------AG-T
i Otolemur_garnettii.GL873528.1                         C 0 I 1
s Ovis_aries.CM001582.2                                 134074515  6 - 275406953 A-A------ATCC
i Ovis_aries.CM001582.2                                 I 1 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      75729  6 +    140051 A-A------ATCC
i Ovis_canadensis.OviCan_scaffold_6251                  I 1 C 0
s Pan_paniscus.CM003386.1                               127571235  5 - 205426864 A-A------AT-C
i Pan_paniscus.CM003386.1                               I 32 I 39
s Pan_troglodytes.CM009241.2                            120148382  5 - 196562556 A-A------AT-C
i Pan_troglodytes.CM009241.2                            I 32 I 39
s Panthera_onca.PanOnc_flattened_line_1615                  30734  6 +    295523 A-A------ATTC
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3634338  6 +  18214204 a-a------attC
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5024115  6 -   6340057 A-A------ATTC
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1063373  6 -   1292953 A-A------ATTC
i Pantholops_hodgsonii.KE114631.1                       I 1 C 0
s Papio_anubis.CM001492.2                               188152351  5 - 188283584 A-A------AT-C
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            48563  5 +     76494 A-A------AT-C
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47509748  5 +  47705337 A-A------AT-C
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 63730  5 -    104429 A-A------AT-C
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  13516  5 -     29451 A-A------AT-C
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                33919  5 +     35859 A-A------AT-C
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    112067  6 -    135482 A-A------ATTC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      39749  5 -     45160 A-A------AT-T
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4946545  5 -   8017169 A-A------TT-T
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            118472 12 -    122454 A-AATTGAAATCC
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           1605  5 -      3310 A-A------AT-C
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       21511  5 -     82327 A-A------AT-C
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           18263  5 +     19957 A-A------AT-C
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26736272  5 +  26888534 A-A------AT-C
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            93523  6 +    112873 A-A------ATTC
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        I 6 C 0
s Pithecia_albicans.k141_991845                             40115  5 -     61926 A-A------AT-C
i Pithecia_albicans.k141_991845                         C 0 I 156
s Pithecia_chrysocephala.k141_159118                        21544  5 +     78826 A-A------AT-C
i Pithecia_chrysocephala.k141_159118                    C 0 I 156
s Pithecia_hirsuta.k141_1152968                              5495  5 -     15800 A-A------AT-C
i Pithecia_hirsuta.k141_1152968                         C 0 I 156
s Pithecia_mittermeieri.k141_2119203                         8693  5 -     16101 A-A------AT-C
i Pithecia_mittermeieri.k141_2119203                    C 0 I 156
s Pithecia_pissinattii.k141_1102319                          2002  5 +      9673 A-A------AT-C
i Pithecia_pissinattii.k141_1102319                     C 0 I 156
s Pithecia_pithecia.tarseq_313                           13470996  5 -  19735023 A-A------AT-C
i Pithecia_pithecia.tarseq_313                          C 0 I 156
s Pithecia_vanzolinii.k141_831006                            9904  5 -     31692 A-A------AT-C
i Pithecia_vanzolinii.k141_831006                       C 0 I 156
s Platanista_gangetica.PlaMin_flattened_line_72990           2539 12 +     21690 A-AATTGAAATCC
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       19296  5 +     44506 A-A------AT-C
i Plecturocebus_bernhardi.k141_959214                   C 0 I 164
s Plecturocebus_brunneus.k141_498086                        19514  5 +     67491 A-A------AT-C
i Plecturocebus_brunneus.k141_498086                    C 0 I 164
s Plecturocebus_caligatus.k141_2539816                       9759  5 -     98129 A-A------AT-C
i Plecturocebus_caligatus.k141_2539816                  C 0 I 164
s Plecturocebus_cinerascens.k141_744510                     19359  5 +    147771 A-A------AT-C
i Plecturocebus_cinerascens.k141_744510                 C 0 I 165
s Plecturocebus_cupreus.k141_1223294                        19610  5 -     23762 A-A------AT-C
i Plecturocebus_cupreus.k141_1223294                    C 0 I 164
s Plecturocebus_dubius.k141_2078842                         19558  5 -     19696 A-A------AT-C
i Plecturocebus_dubius.k141_2078842                     C 0 N 0
s Plecturocebus_grovesi.k141_242819                         19432  5 +    152463 A-A------AT-C
i Plecturocebus_grovesi.k141_242819                     C 0 I 161
s Plecturocebus_hoffmannsi.k141_1595076                      6189  5 +      8943 A-A------AT-C
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 I 164
s Plecturocebus_miltoni.k141_841561                          9149  5 +    134592 A-A------AT-C
i Plecturocebus_miltoni.k141_841561                     C 0 I 164
s Plecturocebus_moloch.k141_890597                          19742  5 -     75465 A-A------AT-C
i Plecturocebus_moloch.k141_890597                      C 0 I 161
s Pongo_abelii.NDHI03003816.1                              183789  5 -    373494 A-A------AT-C
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19803693  5 +  19899266 A-A------AT-C
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               1842  5 -     15069 A-A------AT-C
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              1976  5 +     14865 A-A------AT-C
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                73167  5 +     78963 A-A------GT-T
i Procavia_capensis.ProCapCap_scaffold_15315            I 13 C 0
s Prolemur_simus.MPIZ01000048.1                           6845181  5 +  12164890 A-G------AG-T
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     13616  5 -     30946 A-G------AG-T
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                          322  5 +     11805 A-G------AG-T
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           39653  5 +     52369 A-G------AG-T
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         32041  5 -     44753 A-G------AG-T
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            13963  5 +     27322 A-G------AG-T
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       13605  5 -     53241 A-G------AG-T
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         35877  5 -     48185 A-G------AG-T
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           29941  5 +     77221 A-A------AT-T
i Psammomys_obesus.NESX01026517.1                       I 471 C 0
s Pteronotus_parnellii.KE867983.1                            1085  6 -     27784 T-A------ACTC
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        242599  6 -    344369 A-A------GGTT
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13243212  6 -  17261082 A-A------Attc
i Pteropus_alecto.KB031157.1                            C 0 I 8
s Pteropus_vampyrus.KN525959.1                             601166  6 -   3946241 A-A------attc
i Pteropus_vampyrus.KN525959.1                          C 0 I 8
s Puma_concolor.QAVW01000427.1                          131530929  6 - 161321710 A-A------ATTC
i Puma_concolor.QAVW01000427.1                          I 4 C 0
s Pygathrix_cinerea.k141_374971                             25966  5 +     56732 A-A------AT-C
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6802456  5 +   6970761 A-A------AT-C
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             1848  5 +     18040 A-A------AT-C
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                13021  6 +     68503 A-A------ATTC
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 1 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1784814  6 +   2252614 A-A------ATTC
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           12404  5 -     14454 A-A------AT-C
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206373730  5 - 206558726 A-A------AT-C
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44851378  5 -  45163003 A-A------AT-C
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                16515  6 +    109198 C-T------ATTC
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 I 8
s Saiga_tatarica.SaiTat_scaffold_82192                       4801  6 +     12214 A-A------ATTC
i Saiga_tatarica.SaiTat_scaffold_82192                  I 1 C 0
s Saimiri_boliviensis.NW_024100938.1                     15669167  5 -  43202129 A-A------AT-c
i Saimiri_boliviensis.NW_024100938.1                    C 0 I 194
s Saimiri_cassiquiarensis.k141_808270                        1042  5 +     34089 A-A------AT-T
i Saimiri_cassiquiarensis.k141_808270                   C 0 I 185
s Saimiri_macrodon.k141_2087127                               973  5 -     60842 A-A------AT-T
i Saimiri_macrodon.k141_2087127                         C 0 I 197
s Saimiri_oerstedii.k141_841116                              1042  5 +     67014 A-A------AT-T
i Saimiri_oerstedii.k141_841116                         C 0 I 205
s Saimiri_sciureus.k141_1947592                              1042  5 +     60816 A-A------AT-T
i Saimiri_sciureus.k141_1947592                         C 0 I 201
s Saimiri_ustus.k141_1282476                                  970  5 -     76454 A-A------AT-T
i Saimiri_ustus.k141_1282476                            C 0 I 210
s Sapajus_apella.ctg10                                   17337550  5 -  30362882 A-A------AT-C
i Sapajus_apella.ctg10                                  C 0 I 153
s Sapajus_macrocephalus.k141_966464                         17151  5 -     62485 A-A------AT-C
i Sapajus_macrocephalus.k141_966464                     C 0 I 152
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   28568  4 -    114521 A-A------AT--
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1527475                       24391  5 +     26421 A-A------AT-C
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       4852  5 +     20762 A-A------AT-C
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         38586  5 +     40653 A-A------AT-C
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                            9144  5 -     12194 A-A------AT-C
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     22564  5 -     27512 A-A------AT-C
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         31585  5 -     33692 A-A------AT-C
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   94616  5 -    120886 A-A------TG-T
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 I 18
s Solenodon_paradoxus.SolPar_flattened_line_1012            14811  4 +    739146 A-A------AT--
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2236574  5 +   2842873 A-T------AT-C
i Spermophilus_dauricus.KZ294190.1                      I 4 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             231595  6 -    276980 A-A------ATTC
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            24178  6 +     62062 A-A------ATTC
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189269105  6 + 218635234 A-A------ATTC
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                     13898536  5 +  13920577 A-A------AT-C
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               3018  6 -      6213 A-A------ATTC
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               11953  5 +     45698 A-A------AT-T
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 I 11
s Tapirus_indicus.TapInd_scaffold_176                      803961  6 +   1148477 A-A------ATTT
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  54621  6 +     99546 A-A------ATTT
i Tapirus_terrestris.TapTer_scaffold_14939              I 4 C 0
s Tarsius_lariang.k141_609102                               23307  5 +     42269 A-A------GT-T
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               56621  5 +     65473 A-A------GT-T
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194003886  5 - 194193292 A-A------AT-C
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                   806  5 +      6782 A-A------AT-T
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 I 11
s Tonatia_saurophila.TonSau_scaffold_3334                  133095  6 -    259118 A-A------ATTC
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        22962  5 +     38948 A-A------AT-C
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   16689  5 -     32910 A-A------AT-C
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       22587  5 +     24652 A-A------AT-C
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      1472  5 -      3559 A-A------AT-C
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           39411  5 -     54611 A-A------AT-C
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       15410  5 +     17312 A-A------AT-C
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    22780  5 -     25040 A-A------AT-C
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          1446  5 +      3528 A-A------AT-C
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  47808  5 +     51589 A-A------AT-C
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       10976  5 +     14732 A-A------AT-C
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       1454  5 -     28054 A-A------AT-C
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44656249  5 -  44834318 A-A------AT-C
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        1259  5 +      3372 A-A------AT-C
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   2441  6 +     90398 A-A------ATTC
i Tragulus_javanicus.TraJav_scaffold_14717              I 1 C 0
s Trichechus_manatus.JH594618.1                          16078548  5 +  31416278 A-A------AT-T
i Trichechus_manatus.JH594618.1                         I 13 C 0
s Tupaia_chinensis.KB320831.1                             2788390  5 -   3938065 A-A------AT-G
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                     951  5 +     13056 A-A------AT-G
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69310573 12 -  96451834 A-AATTGAAATCC
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 23773  4 -     25548 A-A------AT--
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6511187  6 +  28682327 A-A------ATTC
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  2120  5 -     20643 A-G------AG-T
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             21665  5 -     33872 A-G------AG-T
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1521895  6 -   2331223 A-A------ATTC
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                134341  6 -    281493 A-A------ATTC
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       123667  5 -    134049 A-A------AT-T
i Xerus_inauris.XerIna_scaffold_7898                    I 4 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        210866  6 -    227762 A-A------ATTC
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           4076 12 -      8775 A-AATTGAAATCC
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_141308              5680 150 -     12508 I
e Megaderma_lyra.MegLyr_scaffold_3562                       61508  0 -    234502 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16291  1 -    119109 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     12283  2 -     20485 I
e Jaculus_jaculus.JH725517.1                              8561873  2 +  11848649 I
e Allactaga_bullata.AllBul_scaffold_70162                    8911  2 -     22067 I
e Rattus_norvegicus.chr11                                13911330  0 +  90463843 C
e Perodicticus_potto.k141_713187                            21218  0 -     27972 C
e Perodicticus_ibeanus.k141_117958                           1921  0 -     23713 C
e Octodon_degus.JH651621.1                                3675582 26 +  10294119 I
e Nannospalax_galili.KL201303.1                            107449  0 +    362372 C
e Mus_spretus.CM004110.1                                 74324507  0 +  97876770 C
e Mus_pahari.LT608305.1                                  67549405  0 +  89017189 C
e Mus_musculus.chr16                                     75485088  0 +  98207768 C
e Mus_caroli.LT608236.1                                  70761964  0 +  92629107 C
e Dolichotis_patagonum.DolPat_scaffold_14102                33375  0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             56104 16 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                14631 16 +     26546 I
e Cavia_tschudii.CavTsc_scaffold_488                       173989  0 +    436027 C
e Cavia_porcellus.DS562889.1                             15795798  0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15783848 16 -  24422027 I

a score=0.000000
s hg38.chr4_GL000008v2_random                                8505 39 +    209709 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-TT--T-C-AGAA-------A-A-----C--T--T--G-AAC-ATGT
s Acinonyx_jubatus.LLWD01000356.1                         2030595 24 +   3721120 -T-A--TC---A----TC----AA-g------t--------aca---t-t--t--t-c-agaa-------a--------------------------
i Acinonyx_jubatus.LLWD01000356.1                       C 0 I 12
s Acomys_cahirinus.AcoCah_scaffold_1625                    108866 44 -    189883 TT-A--TC---A----CCC---AA-A------T--------AAT---A-T-AGTTTTC-AGAA-------A-A-----A--TATG--T-GGC-ACTT
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10653918 46 +  23371972 -T-A--AC---A----TC----AG-T------TCAAAAtctaca---t-t--t--t-c-agaa-------a-a-----aaaa--t--t-agc-actt
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7090618 50 -  16596857 -T-A--CC---ATCAGTC----AG-T------TCAATTtctaca---t-t--t--t-c-agaa-------a-a-----aaat--t--t-agc-aCTT
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allenopithecus_nigroviridis.k141_3103707                  59529 39 +     61638 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-TT--T-C-AGAA-------A-A-----G--T--T--T-AAC-GTGT
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        51337 39 +     53391 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-TT--T-C-AGAA-------A-A-----G--T--T--T-AAC-GTGT
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         2061 39 +     72529 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-TT--T-C-AGAA-------A-A-----G--T--T--T-AAC-GTGT
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          1637 39 +      3797 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-TT--T-C-AGAA-------A-A-----G--T--T--T-AAC-GTGT
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3517350 36 +   4113121 -T-A--CC---A----TC----TG-G------T--------ACA---T-T--T--T-C-AGAG-------A-A-----A--T--A--C-ACC-ATTT
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      387550 36 -    631301 -T-A--CT---G----TC----CA-G------T--------ACA---T-T--T--T-C-AGAA-------A-A-----A--T--T--T-AGT-ACTG
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            27983 36 +     33004 -T-A--CC---A----TC----TG-G------T--------ACG---T-T--T--T-C-AGAG-------A-A-----A--T--A--C-AGC-ATTT
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 59189 24 +     78111 -------------------------------------------T---T-T-TT--T-C-AGAA-------A-A-----G--C--T--T-AAC-ATGT
i Aotus_azarae.k141_3170768                             I 156 C 0
s Aotus_griseimembra.k141_3275623                            2119 24 +     22701 -------------------------------------------T---T-T-TT--T-C-AGAA-------A-A-----G--C--T--T-AAC-ATGT
i Aotus_griseimembra.k141_3275623                       I 155 C 0
s Aotus_nancymaae.KZ196176.1                              5746077 24 +   9889416 -------------------------------------------T---T-T-TT--T-C-AGAA-------A-A-----G--C--T--t-aac-atgt
i Aotus_nancymaae.KZ196176.1                            I 153 C 0
s Aotus_trivirgatus.k141_1740727                             2658 24 -    104377 -------------------------------------------T---T-T-TT--T-C-AGAA-------A-A-----G--C--T--T-AAC-ATGT
i Aotus_trivirgatus.k141_1740727                        I 142 C 0
s Aotus_vociferans.k141_718647                               2667 24 +     23246 -------------------------------------------T---T-T-TT--T-C-AGAA-------A-A-----G--C--T--T-AAC-ATGT
i Aotus_vociferans.k141_718647                          I 151 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                      533 40 +      5067 CT-G--TC---A----TCC---AA-G------G--------ACC---T-T-TA--TAT-GGAA-------A-T-----A--T--T--T-ATA-ACCT
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      14667 40 +     17483 CC-T--TC---A----TCC---TA-G------G--------ACA---T-T-TT--T-CTAGCA-------A-A-----A--T--T--T-TGC-ACTT
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 5651 36 -     29036 -T-A--CT---G----TC----TA-G------T--------ACA---T-T--T--T-C-AGAA-------A-A-----A--T--T--G-AGT-ACTG
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9535930 25 +  39197703 -------------------------------------------TT--T-T-TT--T-C-AGAA-------A-A-----G--C--T--T-AAC-ATGT
i Ateles_geoffroyi_b.tarseq_2582                           I 153 C 0
s Ateles_belzebuth.k141_1348307                             57215 24 +     85812 -------------------------------------------T---T-T-TT--T-C-AGAA-------A-A-----G--C--T--T-AAC-ATGT
i Ateles_belzebuth.k141_1348307                         I 150 C 0
s Ateles_chamek.k141_1072810                                 8214 24 +     89302 -------------------------------------------T---T-T-TT--T-C-AGAA-------A-A-----G--C--T--T-AAC-ATGT
i Ateles_chamek.k141_1072810                            I 152 C 0
s Ateles_geoffroyi_a.k141_1300742                             12723 25 -     58268 -------------------------------------------TT--T-T-TT--T-C-AGAA-------A-A-----G--C--T--T-AAC-ATGT
i Ateles_geoffroyi_a.k141_1300742                         I 152 C 0
s Ateles_marginatus.k141_899112                             60710 24 +    119057 -------------------------------------------T---T-T-TT--T-C-AGAA-------A-A-----G--C--T--T-AAC-ATGT
i Ateles_marginatus.k141_899112                         I 151 C 0
s Ateles_paniscus.k141_1631200                               2661 24 -     25888 -------------------------------------------T---T-T-TT--T-C-AGAA-------A-A-----G--C--T--T-AAC-ATGT
i Ateles_paniscus.k141_1631200                          I 152 C 0
s Avahi_laniger.k141_2840928                                 3376 40 -     16375 CT-A--TC---A----TCC---TA-G------G--------ACA---T-T-TT--T-A-AGAA-------A-A-----A--T--T--T-AGCAATTT
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_767228                               9348 35 -      9688 CT-A--TC---A----TCC---TA-A------G--------ACA---T-T-TT--T-A-AGAA-------A-A-----A--T--T--T-AGC-----
i Avahi_peyrierasi.k141_767228                          C 0 I 14
s Balaenoptera_acutorostrata.KI537095.1                  26377303 36 +  51448160 -T-A--CC---A----TC----CA-G------T--------ATG---C-T--T--T-C-AGAG-------A-A-----A--T--T--T-AGC-ATTC
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        2534 36 -     13118 -T-A--CC---A----TC----CA-G------T--------ATG---C-T--T--T-C-AGAG-------A-A-----A--T--T--T-AGC-ATTC
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   40450 36 -     72089 -T-A--CC---A----TC----TG-G------T--------ACA---T-T--T--T-C-AGAG-------A-A-----A--T--A--C-AGC-ATTT
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6556597 36 +   6870073 -T-A--CC---A----TC----TG-G------T--------ACA---T-T--T--T-C-AGAG-------A-A-----A--T--A--C-AGC-ATTT
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138136828 36 - 161108492 -T-A--CC---A----TC----TG-G------T--------ACA---T-T--T--T-C-AGAG-------A-A-----A--T--A--C-AGC-ATTT
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     569206 36 -    998990 -T-A--CC---A----TC----TG-G------T--------ACA---T-T--T--T-C-AGAG-------A-A-----A--T--A--C-AGC-ATTT
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136292561 36 - 158972876 -T-A--CC---A----TC----TG-G------T--------ACA---T-T--T--T-C-AGAG-------A-A-----A--T--A--C-AGC-ATTT
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1228182 36 -   1914593 -T-A--CC---A----TT----TG-G------T--------ACA---T-T--T--T-C-AGAG-------A-A-----A--T--A--C-AGC-ATTT
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               110564 24 -    171031 -------------------------------------------T---T-T-TT--T-C-AGAA-------A-A-----G--T--T--T-AAC-ATGT
i Cacajao_ayresi.k141_724503                            I 157 C 0
s Cacajao_calvus.k141_96166                                  9590 24 +    125063 -------------------------------------------T---T-T-TT--T-C-AGAA-------A-A-----G--T--T--T-AAC-ATGT
i Cacajao_calvus.k141_96166                             I 157 C 0
s Cacajao_hosomi.k141_303789                                11638 24 -    216513 -------------------------------------------T---T-T-TT--T-C-AGAA-------A-A-----G--T--T--T-AAC-ATGT
i Cacajao_hosomi.k141_303789                            I 157 C 0
s Cacajao_melanocephalus.k141_1160263                        4178 24 -    134917 -------------------------------------------T---T-T-TT--T-C-AGAA-------A-A-----G--T--T--T-AAC-ATGT
i Cacajao_melanocephalus.k141_1160263                   I 158 C 0
s Camelus_bactrianus.KN276303.1                           3216820 36 -   8989139 -T-A--CC---A----TC----Ta-g------t--------ata---t-t--t--t-c-agaa-------a-a-----a--t--t--t-agc-ACCT
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           394521 36 -  15254737 -T-A--CC---A----TC----Ta-g------t--------ata---t-t--t--t-c-agaa-------a-a-----a--t--t--t-agc-ACCT
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2970258 36 +   6889770 -T-A--CC---A----TC----Ta-g------t--------ata---t-t--t--t-c-agaa-------a-a-----a--t--t--t-agc-ACCT
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11515303 38 +  39901454 -T-A--CC---A----TC----AA-G------T--------ATA---T-T--T--T-C-AGAA-------A-A-----AAAT--T--T-AGC-ACTT
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   10320 38 +     87036 -T-A--CC---A----TC----AA-G------T--------ATA---T-T--T--T-C-AGAA-------A-A-----AAAT--T--T-AGC-ACTT
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11261962 38 -  35597290 -T-A--CC---A----TC----aa-g------t--------ata---t-t--t--t-c-agaa-------a-a-----aaat--t--t-agc-aCTT
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11084491 38 +  39895921 -T-A--CC---A----TC----aa-g------t--------ata---t-t--t--t-c-agaa-------a-a-----aaat--t--t-agc-aCTT
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16451525 38 -  44759192 -T-A--CC---A----TC----aa-g------t--------ata---t-t--t--t-c-agaa-------a-a-----aaat--t--t-agc-aCTT
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21322457 36 + 157394656 -T-A--CC---A----TC----TG-G------T--------ACA---T-T--T--T-C-AGAG-------A-A-----A--T--A--C-AGC-ATTT
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135703684 36 - 157403528 -T-A--CC---A----TC----TG-G------T--------ACA---T-T--T--T-C-AGAG-------A-A-----A--T--A--C-AGC-ATTT
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_647363                  1243 19 +      1887 ---------------------------------------------------------G-AGAA-------A-A-----A--T--A--CTAGC-AATT
i Capromys_pilorides.CapPil_scaffold_647363             I 26 C 0
s Carlito_syrichta.NW_007248099.1                          305821 36 +    345090 CT-A--TC---A----TTT---AA-T------G--------gca---t-t-tt--t-c-agaa-------a-a-----t--g--t--t-agC-A---
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               56727 36 +     67245 -T-A--CT---G----TC----TA-C------T--------ACA---T-T--T--T-C-AGAA-------A-A-----A--T--T--T-AGT-ACTG
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   27233 43 +     33760 CT-A--CC---A----TCC---AA-G------A--------AAATTAT-T-TT--TTC-AGAA-------A-A-----A--T--T--T-AGC-ACTT
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   156042 36 -    276539 -T-A--CC---A----TC----TA-G------T--------ATA---T-T--T--T-C-AGAA-------A-A-----A--A--T--T-AGC-ATCT
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18887404 24 -  29618158 -------------------------------------------T---T-T-TT--C-C-AGAA-------A-A-----G--C--T--T-AAC-GTGT
i Cebus_albifrons.Contig22                              I 158 C 0
s Cebus_olivaceus.k141_93739                                 4948 24 -     26817 -------------------------------------------T---T-T-TT--C-C-AGAA-------A-A-----G--C--T--T-AAC-GTGT
i Cebus_olivaceus.k141_93739                            I 156 C 0
s Cebus_unicolor.k141_239009                                 9191 24 +     25043 -------------------------------------------T---T-T-TT--C-C-AGAA-------A-A-----G--C--T--T-AAC-GTGT
i Cebus_unicolor.k141_239009                            I 159 C 0
s Cephalopachus_bancanus.k141_702587                         4870 33 +     21754 ------TT---A----TCT---AA-T------G--------ACA---T-T-TT--T-C-AGAA-------A-A-----T--G--T--T-AGC-A---
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4360514 36 +   7569818 -t-a--tc---a----tc----ta-g------t--------aca---t-t--t--t-c-agaa-------a-a-----a--t--t--t-agc-ACTT
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623          269 36 -      9338 -T-A--TC---A----TC----TA-G------T--------ACA---T-T--T--T-C-AGAA-------A-A-----A--T--T--T-AGC-ACTT
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6551324 40 +   6739814 CT-A--TT---A----TCC---TA-G------A--------act--tt-t-tt--t-c-agaa-------a-a-----g--t--t--t-aAC-GTGT
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      52801 40 -     54931 CT-A--TT---A----TCC---TA-G------A--------ACTT--T-T-TT--T-C-AGAA-------A-A-----G--T--T--T-AAC-GTGT
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         17785 40 -     19697 CT-A--TT---A----TCC---TA-G------A--------ACTT--T-T-TT--T-C-AGAA-------A-A-----G--T--T--T-AAC-GTGT
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         55316 40 -    107033 CT-A--TT---A----TCC---TA-G------A--------ACTT--T-T-TT--T-C-AGAA-------A-A-----G--T--T--T-AAC-GTGT
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        1758 39 -      3853 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-TT--C-C-AGAA-------A-A-----G--T--T--T-AAC-GTGT
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          25691 39 +     30494 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-TT--T-C-AGAA-------A-A-----G--T--T--T-AAC-GTGT
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           1715 39 -      4022 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-TT--T-C-AGAA-------A-A-----G--T--T--T-AAC-GTGT
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          1608 39 -      3505 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-TT--T-C-AGAA-------A-A-----G--T--T--T-AAC-GTGT
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           20412 39 +     35983 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-TT--T-C-AGAA-------A-A-----G--T--T--T-AAC-GTGT
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11986934 39 +  12117833 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-TT--T-C-AGAA-------A-A-----G--T--T--T-AAC-GTAT
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46473687 39 +  46592721 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-TT--T-C-AGAA-------A-A-----G--T--T--T-AAC-GTGT
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      31514 39 +     33420 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-TT--T-C-AGAA-------A-A-----G--T--T--T-AAC-GTGT
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        1550 39 -      3443 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-TT--T-C-AGAA-------A-A-----G--T--T--T-AAC-GTGT
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      2541 39 -      4669 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-TT--T-C-AGAA-------A-A-----G--T--T--T-AAC-GTGT
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        2341 39 -      4411 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-TT--T-C-AGAA-------A-A-----G--T--T--T-AAC-GTGT
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         1866 39 -      4205 TT-A--TT---A----TCC---TA-G------A--------ACT---T-T-TT--T-C-AGAA-------A-A-----G--T--T--T-AAC-GTGT
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_1070855            96 26 -      1715 --------------------------------A--------GTG---T-T--T--T-C-ATCA-------A-A-----A--T--T--T-AGC-ACAT
i Chaetophractus_vellerosus.ChaVel_scaffold_1070855     I 8 C 0
s Cheirogaleus_major.k141_1157592                           55713 39 -     68416 CT-A--TC---A----TCC---TA-G------G--------ACA---T-T-TT--T-A-AGAG-------A-A-----A--T--T--T-AGC-ACTT
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            4762 39 +     13308 CT-A--TC---A----TCC---TA-G------G--------ACA---T-T-TT--T-A-AGAG-------A-A-----A--T--T--T-AGC-ACTT
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             2207 24 -     18223 -------------------------------------------T---T-T-TT--T-C-AGAA-------A-A-----G--C--T--T-AAC-ATGT
i Cheracebus_lucifer.k141_619653                        I 162 C 0
s Cheracebus_lugens.k141_203936                             19230 24 +     25473 -------------------------------------------T---T-T-TT--T-C-AGAA-------A-A-----G--C--T--T-AAC-ATGT
i Cheracebus_lugens.k141_203936                         I 162 C 0
s Cheracebus_regulus.k141_2128895                           38269 24 +     57117 -------------------------------------------T---T-T-TT--T-C-AGAA-------A-A-----G--C--T--T-AAC-ATGT
i Cheracebus_regulus.k141_2128895                       I 162 C 0
s Cheracebus_torquatus.k141_315545                          42944 24 +     54541 -------------------------------------------T---T-T-TT--T-C-AGAA-------A-A-----G--C--T--T-AAC-ATGT
i Cheracebus_torquatus.k141_315545                      I 162 C 0
s Chinchilla_lanigera.JH721867.1                         15958616 18 +  43084221 ---------------------------------------------------------g-agaa-------a-a-----a--a--t--t-agc-AATT
i Chinchilla_lanigera.JH721867.1                        I 20 C 0
s Chiropotes_israelita.k141_1189915                         67785 24 +    196370 -------------------------------------------T---T-T-TT--T-C-AGAA-------A-A-----G--T--T--T-AAC-ATGT
i Chiropotes_israelita.k141_1189915                     I 157 C 0
s Chiropotes_sagulatus.k141_773804                          11966 24 +     40510 -------------------------------------------T---T-T-TT--T-C-AGAA-------A-A-----G--T--T--T-AAC-ATGT
i Chiropotes_sagulatus.k141_773804                      I 163 C 0
s Chlorocebus_aethiops.ctg22                             15135147 39 -  15256731 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-TT--T-C-AGAA-------A-A-----G--T--T--T-AAC-GTGT
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      30193 39 -     53260 CT-A--TT---A----TCC---TA-G------A--------ACT---T-C-TT--T-C-AGAA-------A-A-----G--T--T--T-AAC-GTGT
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101140642 39 + 101219884 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-TT--T-C-AGAA-------A-A-----G--T--T--T-AAC-GTGT
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                13719 26 -     21363 --------------------------------G--------ACG---T-T--T--T-C-ATCA-------A-A-----A--T--T--T-AGC-ACAT
i Choloepus_didactylus.ChoDid_scaffold_36182            I 11 C 0
s Choloepus_hoffmanni.KN194586.1                           759025 26 +    964067 --------------------------------G--------aca---t-t--t--t-c-atca-------a-a-----a--t--t--t-agc-ACAT
i Choloepus_hoffmanni.KN194586.1                        I 11 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_141308              5830  9 -     12508 ------------------------------------------------------------------------------------c--t-act-gcac
i Chrysochloris_asiatica.ChrAsi_scaffold_141308         I 150 C 0
s Colobus_angolensis.KN985967.1                          10879221 39 +  10971483 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-CT--T-C-AGAA-------A-A-----G--T--T--T-AAC-ATGT
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147660379 39 + 156195979 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-CT--T-C-AGAA-------A-A-----G--T--T--T-AAC-ATGT
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            12365 39 +     23629 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-CT--T-C-AGAA-------A-A-----G--T--T--T-AAC-ATGT
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60609976 37 +  78930452 -CAA--T----A----Tc----tg-g------t--------aca---t-t--a--a-a-aaaa-------a-a-----a--a--c--tcagc-acTA
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         36436 36 -     40477 -T-A--TC---A----TC----TA-G------T--------ACA---T-T--T--T-C-AGAA-------A-A-----A--T--T--G-AGC-TCTT
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 274310 44 -    399297 CT-A--TC---A----TCC---AA-A------T--------AAT---T-T-TCTTTTC-AGAA-------A-A-----A--TGTA--T-AGC-ACTT
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53025483 51 +  72327488 CT-A--CC---A----CCC---AA-A------T--------AAA---T-t-tgttctc-agaaaaaaaaaa-a-----a--tgtg--t-ggc-aCTT
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             15960 38 -     19186 -T-ATATA---A----CC----TA-G------T--------ATG---T-T--T--T-C-AGAG-------A-A-----A--T--T--T-AGC-ACTT
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            48622 37 -     70449 -T-A--TC---A----TC----AA-G------T--------ACA---T-T--T--T-C-AGGA-------A-A-----A-AT--T--T-AGC-ATTT
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  205033 40 -    956709 CT-A--TC---A----AAC---AA-G------G--------ACA---T-T-TG--TAA-AGAA-------A-A-----A--T--T--T-AGC-TCTG
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 27286 24 -     67205 ---T--CC---A----ACC---AA-CTGATTTC--------ACA---A-T-TT--------------------------------------------
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 I 20
s Dasypus_novemcinctus.JH568778.1                          178907 26 -   6883506 --------------------------------A--------AAG---T-T--T--T-C-ATCA-------A-A-----A--T--T--T-AGC-ACAT
i Dasypus_novemcinctus.JH568778.1                       I 14 C 0
s Daubentonia_madagascariensis.ctg11                     16841584 39 +  31942871 CT-A--TC---A----TCC---TA-G------G--------ATA---T-T-TT--T-A-AGAA-------A-A-----A--T--T--T-AGC-ATTT
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80034049 36 -  96802777 -T-G--CC---A----TC----CA-G------T--------ATG---C-T--T--T-C-AGAT-------A-A-----A--T--T--T-AGC-ATTC
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18696042 36 -  18957592 -T-A--CT---G----TC----TA-g------t--------aca---t-t--t--t-c-agaa-------a-a-----a--t--t--t-agt-ACTG
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 319176 36 +    993696 -t-a--tc---a----tc----ta-g------t--------aca---t-t--t--t-c-agaa-------a-a-----a--t--t--t-agC-ACTT
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_170113                  434 36 +       818 -T-A--TC---A----TC----TA-G------T--------ACA---T-T--T--T-C-AGAA-------A-A-----A--T--T--T-AGC-ACTT
i Diceros_bicornis.DicBicMic_scaffold_170113            C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   154484 19 +    228994 ---------------------------------------------------------G-AGAA-------AAA-----A--A--T--T-AGC-AGTT
i Dinomys_branickii.DinBra_scaffold_1996                I 20 C 0
s Dipodomys_ordii.KN672545.1                              3652212 39 +   4240102 CT-A--TT---T----TCC---AA-A------G--------aca---t-t-t---ttc-agaa-------a-t-----a--t--t--t-acc-aTTT
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 23766 39 +     28912 CT-A--TT---T----TCC---AA-A------G--------ACA---T-T-T---TTC-AGAA-------A-T-----A--T--T--T-ACC-ATTT
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Echinops_telfairi.JH980316.1                           22991305 38 -  44670279 CT-A--TC---G----TGC---TA-G------G--------ATA---T-T--T--T-C-ATCA-------A-A-----A--C--T--T-AGC-ACAC
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                  9430 25 +     24177 -----------------------------------------aca---t-t--t--t-c-agaa-------a-a-----t--t--t--t-agc-ACTT
i Eidolon_helvum.KE772537.1                             I 8 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1488718 36 +   1727528 -T-A--CC---A----TC----TG-G------T--------ACA---T-T--T--T-C-AGAG-------A-A-----A--T--A--C-AGC-ATTT
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7803472 38 +  15467074 CT-G--TC---A----TCC---TA-G------G--------ACA---T-T--T--C-C-ATCA-------T-A-----A--T--T--T-AGC-ACAC
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        235955 47 -    369425 TT-A--TC---A----CTC---AT-A------T--------AAt---c-t-tgttttc-agaaaaa----a-a-----a--tgtg--t-ggc-aCTC
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           2964 45 -      7838 TT-A--TC---A----CTC---AT-A------T--------Aat---c-t-tgttttc-agaaa------a-a-----a--tgtG--T-GGC-ACTT
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85868340 50 +  99434291 -T-A--CC---GCCAGTC----AA-T------TCAATTtctaca---t-t--t--t-c-agaa-------a-a-----aaat--t--t-agc-ACTT
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Equus_asinus.JREZ01000062.1                             5849905 36 -   7175178 -t-a--tc---A----TC----TA-G------T--------ACA---T-C--T--G-C-AGGA-------A-A-----A--T--T--T-AAC-ACTT
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13348408 36 +  41866177 -t-a--tc---A----TC----TA-G------T--------ACA---T-C--T--G-C-AGGA-------A-A-----A--T--T--T-AAC-ACTT
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                           9898 36 +     92910 -t-a--tc---A----TC----TA-G------T--------ACA---T-C--T--G-C-AGGA-------A-A-----A--T--T--T-AAC-ACTT
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11529491 39 +  16010500 -T-C--CC---A----TC-AGACT-a------t--------aca---t-t--t--a-a-agaa-------a-a-----a--c--t--t-aGC-ACTT
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48767326 39 -  48907691 GT-A--TT---A----TCC---TA-G------A--------ACT---T-T-TT--T-C-AGAA-------A-A-----G--T--T--T-AAC-GTGT
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          312187 36 +    330699 -T-A--CC---A----TC----CA-G------T--------ATG---C-T--T--T-C-AGGG-------A-A-----A--T--T--T-AGC-ATTC
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             58616 36 +     89355 -T-A--CC---A----TC----CA-G------T--------ATG---C-T--T--T-C-AGAG-------A-A-----A--T--T--T-AGC-ATTC
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              1785 39 +     13586 CT-A--TC---T----TCC---TA-G------G--------ACA---T-T-TT--T-A-AGAA-------A-A-----A--T--T--T-AGC-ACTT
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               1721 39 -      6809 CT-A--TC---T----TCC---TA-G------G--------ACA---T-T-TT--T-A-AGAA-------A-A-----A--T--T--T-AGC-ACTT
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             8193 39 +     36558 CT-A--TC---T----TCC---TA-G------G--------ACA---T-T-TT--T-A-AGAA-------A-A-----A--T--T--T-AGC-ACTT
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             4509 39 +     60246 CT-A--TC---T----TCC---TA-G------G--------ACA---T-T-TT--T-A-AGAA-------A-A-----A--T--T--T-AGC-ACTT
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 7997 39 +    109717 CT-A--TC---T----TCC---TA-G------G--------ACA---T-T-TT--T-A-AGAA-------A-A-----A--T--T--T-AGC-ACTT
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               12371 39 +     16540 CT-A--TC---T----TCC---TA-G------G--------ACA---T-T-TT--T-A-AGAA-------A-A-----A--T--T--T-AGC-ACTT
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                12648 39 +     27497 CT-A--TC---C----TCC---TA-G------G--------ACA---T-T-TT--T-A-AGAA-------A-A-----A--T--T--T-AGC-ACTT
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           15109 39 +     26808 CT-A--TC---T----TTC---TA-G------G--------ACA---T-T-TT--T-A-AGAA-------A-A-----A--T--T--T-AGC-ACTT
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                29837 39 +     46535 CT-A--TC---T----TCC---TA-G------G--------ACA---T-T-TT--T-A-AGAA-------A-A-----A--T--T--T-AGC-ACTT
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              12560 39 -     29447 CT-A--TC---T----TCC---TA-G------G--------ACA---T-T-TT--T-A-AGAA-------A-A-----A--T--T--T-AGC-ACTT
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129889575 24 - 159252932 -T-A--TC---A----TC----AA-g------t--------aca---t-t--t--t-c-agaa-------a--------------------------
i Felis_catus.CM001386.2                                C 0 I 12
s Felis_catus_fca126.CM031420.1                         129276649 24 - 158578461 -T-A--TC---A----TC----Aa-g------t--------aca---t-t--t--t-c-agaa-------a--------------------------
i Felis_catus_fca126.CM031420.1                         C 0 I 12
s Felis_nigripes.FelNig_flattened_line_8080                 17784 24 +     52776 -T-A--TC---A----TC----AA-G------T--------ACA---T-T--T--T-C-AGAA-------A--------------------------
i Felis_nigripes.FelNig_flattened_line_8080             C 0 I 12
s Fukomys_damarensis.KN123630.1                          13889799 18 -  19261668 ---------------------------------------------------------c-agaa-------a-a-----a--a--a--t-agc-aatt
i Fukomys_damarensis.KN123630.1                         I 22 C 0
s Galago_moholi.ctg555                                     207729 36 -    847004 -------C---T----TCC---TA-G------G--------ATG---T-T-TT--T-CTAGCA-------A-A-----A--T--T--T-CGC-ACTT
i Galago_moholi.ctg555                                  I 1 C 0
s Galago_senegalensis.k141_964197                           10109 36 -     43889 -------C---T----TCC---TA-G------G--------ATG---T-T-TT--T-CTAGCA-------A-A-----A--T--T--T-CGC-ACTT
i Galago_senegalensis.k141_964197                       I 1 C 0
s Galagoides_demidoff.k141_1769638                           7157 40 +     27357 CC-A--TC---A----TCC---TA-G------G--------ACA---T-T-TT--T-CTAGCA-------A-A-----A--T--T--T-TGC-ACTT
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               153036 40 +    324696 CT-A--TC---A----TTG---TA-G------G--------ATA---T-TGTT--T-T-GGAA-------A-A-----A--C--A--C-AGC-ACTT
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    178233 36 -    189561 -T-A--CC---A----TC----TG-G------T--------ACG---T-T--T--T-C-AGAG-------A-A-----A--C--A--C-AGC-ATTT
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                            9463 18 -     18683 ---------------------------------------------------------C-AGAA-------A-A-----A--T--T--T-AGC-ACCC
i Glis_glis.GliGli_scaffold_79770                       I 18 C 0
s Gorilla_beringei.k141_111300                               1900 39 -     14630 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-TT--T-C-AGAA-------A-A-----C--T--T--T-AAC-ATGT
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119648998 39 - 195582420 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-TT--T-C-AGAA-------A-A-----C--T--T--T-AAC-ATGT
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   73998 37 +    118900 ------TC---A----TCC---CG-T------G--------ACT---T-T-TA--TAC-AGGA-------A-A-----A--T--T--T-AGC-ACCT
i Graphiurus_murinus.GraMur_scaffold_4493               I 1 C 0
s Hapalemur_alaotrensis.k141_1198205                         2326 39 +      3980 CT-A--TC---A----TCC---TA-G------G--------ACA---T-T-TT--T-A-AGAA-------A-A-----A--T--T--T-AGC-ACTT
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             24806 39 +     26611 CT-A--TC---A----TCC---TA-G------G--------ACA---T-T-TT--T-A-AGAA-------A-A-----A--T--T--T-AGC-ACTT
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             2260 39 +     56096 CT-A--TC---A----TCC---TA-G------G--------ACA---T-T-TT--T-A-AGAA-------A-A-----A--T--T--T-AGC-ACTT
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        25533 39 -     42470 CT-A--TC---A----TCC---TA-G------G--------ACA---T-T-TT--T-A-AGAA-------A-A-----A--T--T--T-AGC-ACTT
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        42130 39 -     54384 CT-A--TC---A----TCC---TA-G------G--------ACA---T-T-TT--T-A-AGAA-------A-A-----A--T--T--T-AGC-ACTT
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              13827 37 +     53719 -T-A--TC---A----TG----AA-G------T--------ACA---T-T--T--T-C-AGGA-------A-A-----A-AT--T--T-AGC-ATTT
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                24719 36 -     91191 -T-A--CC---A----TC----TG-G------T--------ACA---T-T--T--T-C-AGAG-------A-A-----A--T--A--C-AGC-ATTT
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2547933 18 +  31725842 ---------------------------------------------------------g-agaa-------a-a-----t--a--t--t-agc-aatt
i Heterocephalus_glaber.JH602058.1                      I 40 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               53308 38 +     73687 CT-G--CC---A----CCC---TA-G------G--------ATA---G-T--T--T-C-CTCA-------A-A-----A--T--T--T-AGG-ATGT
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              144303 36 +    277961 -T-A--CC---A----TC----CA-G------T--------ATG---T-T--T--T-C-GGAG-------A-A-----A--T--T--T-AGC-ATTT
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      275735 36 -    477199 -T-A--CC---A----TC----Ta-c------t--------aca---t-t--t--t-c-agaa-------a-a-----a--t--t--t-agc-ACTT
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              4890 36 -      9143 -T-A--CC---A----TC----TA-C------T--------ACA---T-T--T--T-C-AGAA-------A-A-----A--T--T--T-AGC-ACAT
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg649                                    98570 39 +    115816 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-TT--T-C-AGAA-------A-A-----C--T--T--T-AAC-ATGT
i Hoolock_leuconedys.ctg649                                C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 12896 37 -     67322 -T-A--TC---A----TC----AA-G------T--------ATA---T-T--T--T-C-AGGA-------A-A-----A-AT--T--T-AGC-ATTT
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hylobates_abbotti.k141_493872                              1707 39 +      5897 CT-A--TT---A----TCC---TG-G------A--------ACT---T-T-TT--T-C-AGAG-------A-A-----C--T--T--T-AAC-ATAT
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_961056                              21478 39 -     21634 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-TT--T-C-AGAA-------A-A-----C--T--T--T-AAC-ATGT
i Hylobates_agilis.k141_961056                          I 460 I 58
s Hylobates_klossii.k141_584463                                84 39 -      1009 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-TT--T-C-AGAA-------A-A-----C--T--T--T-AAC-ATGT
i Hylobates_klossii.k141_584463                         C 0 C 0
s Hylobates_muelleri.k141_1133650                            1142 39 -      2775 CT-A--TT---A----TCC---TA-G------A--------ACA---T-T-TT--T-C-AGAA-------A-A-----C--T--T--T-AAC-GTGT
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             29744 39 -     60944 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-TT--T-C-AGAA-------A-A-----C--T--T--T-AAC-ATGT
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     2865 40 +     22540 CT-A--TC---A----ACC---AA-G------G--------ACA---T-A-TT--TTT-AGAA-------A-A-----A--T--T--T-AGC-AATT
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7122655 40 +  13083262 CT-A--TC---A----TCC---AA-A------G--------ATC---T-T-TC--TAA-GGAT-------A-T-----A--T--C--T-AGC-ACCT
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_3334527                                   8775 39 +      9207 CT-A--TC---A----TCC---TA-A------G--------ACA---T-T-TT--T-A-AGAA-------A-A-----A--T--T--T-AGCA-CTT
i Indri_indri.k141_3334527                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               5976 36 +     17520 -T-A--CC---A----TC----CA-G------T--------ATG---C-T--T--T-C-AGAG-------A-A-----A--T--T--T-AGC-ATTC
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               20808 36 +     37189 -T-A--CC---A----TC----CA-G------T--------ATG---C-T--T--T-C-AGAG-------A-A-----A--T--T--T-AGC-ATTC
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          46784 24 -    147782 -------------------------------------------T---T-T-TT--T-C-AGAA-------A-A-----G--C--T--T-AAC-ATGT
i Lagothrix_lagothricha.k141_12968                      I 164 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   110917 36 -    115756 -T-A--CC---A----TC----CA-G------T--------ACA---T-T--T--T-C-AGAA-------A-C-----A--T--T--T-AGC-ACTT
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258403812 39 - 285822530 CT-A--TC---A----TCC---TA-G------G--------ACA---T-T-TT--T-A-AGAA-------A-A-----A--T--T--T-AGT-ACTT
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        20710 39 +     39228 CT-A--TC---A----TCC---TA-A------A--------ACA---T-T-TT--C-A-AGAA-------A-A-----A--T--T--T-AGC-ACTT
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            50084 39 +     63517 CT-A--TC---A----TCC---TA-A------A--------ACA---T-T-TT--C-A-AGAA-------A-A-----A--T--T--T-AGC-ACTT
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        75306 39 +    116806 CT-A--TC---A----TCC---TA-A------A--------ACA---T-T-TT--T-A-AGAA-------A-A-----A--T--T--T-AGC-ACTT
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     28347 39 -     33031 CT-A--TC---A----TCC---TA-A------A--------ACA---T-T-TT--C-A-AGAA-------A-A-----A--T--T--T-AGC-ACTT
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3082586 46 -   3498232 -T-A--CC---A----TC----AG-T------CCAATTtctaca---t-t--t--t-c-agaa-------a-a-----aaac--t--t-aGC-ACTT
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                     9808 37 +     22452 -T-C--TC---A-----CC---TA-G------G--------ACA---A-T-TT--T-C-AGAA-------A-A-----A--T--T--C-AGC-ACTT
i Lepus_americanus.LepAme_scaffold_62849                I 1 C 0
s Lipotes_vexillifer.KE558548.1                            133151 36 +   3060487 -T-A--CC---A----CC----CA-G------T--------ATG---C-T--T--T-C-AGAG-------A-A-----A--T--T--G-AGG-ATTC
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19244411 41 +  19376315 CT-A--TT---A----TCC---TA-G------A--------ACTTT-T-T-TT--T-C-AGAA-------A-A-----G--T--T--T-AAC-GTGT
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            7452 40 +     84689 CC-A--TC---A----TCC---TG-G------G--------ACA---T-T-TT--T-CTAGCA-------A-A-----A--T--T--T-TGC-ACTT
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3775203 40 +   6799190 CC-A--TC---A----TCC---TG-G------G--------ACA---T-T-TT--T-CTAGCA-------A-A-----A--T--T--T-TGC-ACTT
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20587881 38 -  62548349 CT-G--TC---A----TCC---CA-G------A--------ACA---T-T--T--T-C-CTCA-------A-A-----A--T--T--C-CGC-ACGC
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11083947 38 +  39895028 -T-A--CC---A----TC----aa-g------t--------ata---t-t--t--t-c-agaa-------a-a-----aaat--t--t-agc-aCTT
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             16096 39 +     74745 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-TT--T-C-AGAA-------A-A-----G--T--T--T-AAC-GTGT
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12702602 39 +  12821369 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-TT--T-C-AGAA-------A-A-----G--T--T--T-AAC-GTGT
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               4698 39 +      6569 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-TT--T-C-AGAA-------A-A-----G--T--T--T-AAC-GTGT
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           42999 39 +     63263 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-TT--T-C-AGAA-------A-A-----G--T--T--T-AAG-GTGT
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_1068107                               11575 39 +     12679 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-TT--T-C-AGAA-------A-A-----G--T--T--T-AAC-GTGT
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                1148 39 +      3017 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-TT--T-C-AGAA-------A-A-----G--T--T--T-AAC-GTGT
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  42760 39 -     79256 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-TT--T-C-AGAA-------A-A-----G--T--T--T-AAC-GTGT
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196031678 39 + 196197964 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-TT--T-C-AGAA-------A-A-----G--T--T--T-AAC-GTGT
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11441784 39 +  11645122 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-TT--T-C-AGAA-------A-A-----G--T--T--T-AAC-GTGT
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   1707 39 -     46448 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-TT--T-C-AGAA-------A-A-----G--T--T--T-AAC-GTGT
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                1537 39 -      3617 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-TT--T-C-AGAA-------A-A-----G--T--T--T-AAC-GTGT
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 11870 39 -     55006 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-TT--T-C-AGAA-------A-A-----G--T--T--T-AAC-GTGT
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43836907 39 +  43892939 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-TT--T-C-AGAA-------A-A-----G--T--T--T-AAC-GTGT
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                4130 39 -      5978 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-TT--T-C-AGAA-------A-A-----G--T--T--T-AAC-GTGT
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               1712 39 -     27140 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-TT--T-C-AGAA-------A-A-----G--T--T--T-AAC-GTGT
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43433572 40 -  43563597 CT-A--TT---A----TCC---TA-G------A--------ACTT--T-T-TT--T-C-AGAA-------A-A-----G--T--T--T-AAC-GTGT
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4446398 40 -   4543643 CT-A--TT---A----TCC---TA-G------A--------ACTT--T-T-TT--T-C-AGAA-------A-A-----G--T--T--T-AAC-GTGT
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            143213 36 +    252755 -T-T--TC---A----TC----ta-a------t--------aca---t-t--t--t-c-agaa-------a-a-----a--t--t--t-agC-ACTT
i Manis_javanica.JSZB01003966.1                         C 0 I 1
s Manis_pentadactyla.KN017078.1                             33279 36 +     58827 -T-T--TC---A----TC----ta-a------t--------aca---t-t--t--t-c-agaa-------a-a-----a--t--t--t-agC-ACTT
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36870502 40 +  64221397 CT-A--TC---A----TCC---AA-A------G--------ATC---T-T-TC--TAA-GGAT-------A-T-----A--T--C--T-AGC-ACCT
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       61508 21 -    234502 -------------------------------------------------------T-C-AGAA-------A-A-----A--A--AAAA-TGT-ACTT
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_1828            225838 50 -    226874 -T-A--CC---GCCAGTC----AG-T------TCAATTTCTACA---T-T--T--T-C-AGAA-------A-A-----AAAT--T--T-AGC-ACTT
i Mellivora_capensis.MelCap_flattened_line_1828         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233                8412 29 +     15977 TT-A--TC---A----CCC---AA-A------T--------AAT---T-T-TGTTTTC-AGAA----------------------------------
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 I 14
s Mesocricetus_auratus.KB708139.1                         1043219 46 -  26018355 CT-A--TC---A----ccc---aa-a------t--------aat---t-t-tgttttt-agaaaa-----a-a-----a--tgtg--t-ggc-GCTT
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_183284                    847 36 +      2166 -T-A--CC---A----TC----CA-G------T--------ATG---C-T--T--T-C-AGAG-------A-A-----A--T--T--T-AGC-ATTC
i Mesoplodon_bidens.MesBid_scaffold_183284              C 0 C 0
s Microcebus_murinus.CM007691.1                          16506929 39 +  47401472 CT-A--TC---A----TCC---Ta-g------g--------aca---t-t-tt--t-a-agaa-------a-a-----a--t--t--t-agc-aCTT
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  28251 38 -     48017 CT-A--TC---A----TCC---TA-G------G--------ATA---T-T--T--T-C-CTCA-------A-A-----A--C--T--T-CAC-ACAC
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               19888 36 -     32043 -T-A--CT---G----TC----TA-G------T--------ACA---T-C--T--T-C-AGAA-------A-A-----A--T--T--T-AGT-ACTG
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22816103 46 -  98408828 TT-A--TC---A----ctc---at-a------t--------aat---t-t-tgttttc-aa-aaaa----a-a-----a--tgtg--t-ggc-aCTT
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8206611 27 +  10048721 -T-A--CC---A----TC----TA-g------t--------act---t-t--t--t-c-agaa-------a-a-----a--t---------------
i Miniopterus_natalensis.LDJU01000022.1                 C 0 I 8
s Miniopterus_schreibersii.MinSch_scaffold_24116            31292 27 +     45743 -T-A--CC---A----TC----TA-G------T--------ACT---T-T--T--T-C-AGAA-------A-A-----A--T---------------
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 I 8
s Miopithecus_ogouensis.k141_2666161                        32245 39 +     34273 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-TT--T-C-AGAA-------A-A-----G--T--T--T-AAC-GTGT
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         7884 46 -    104932 -T-A--CC---A----TC----AG-T------CCAATTTCTACA---T-T--T--T-C-AGAA-------A-A-----AAAC--T--T-AGC-ACTT
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     2342 39 +      8497 CT-A--TC---A----TCC---TA-G------G--------ACA---T-T-TT--A-A-AGAA-------A-A-----A--T--T--T-AGC-ACTT
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 143574 36 +    154973 -T-A--CC---A----TC----CA-G------T--------ATG---C-T--T--T-C-AGAG-------A-A-----A--T--T--T-AGC-ATTC
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                158427 36 +    265003 -t-a--cc---a----tc----ta-c------t--------aca---t-t--t--t-c-agag-------a-a-----t--t--t--t-agt-actg
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 1818 36 -      4346 -T-A--CC---A----TC----TG-G------T--------ACA---T-T--T--T-C-AGAG-------A-A-----A--T--A--C-AGC-ATTT
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  141517 37 -    168139 -T-A--TC---A----TC----AA-G------T--------ACA---T-T--T--T-C-AGGA-------A-A-----A-AT--T--T-AGC-ATTT
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          16429 36 -    100666 -T-A--CC---A----TC----TA-G------T--------ATG---T-T--T--T-C-AGAA-------A-A-----A--T--T--T-AGC-ACTT
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70761964 32 +  92629107 --------------------------------g--------aat---t-t-tgttttc-agaa-------a-a-----a--tatg--a-GGC-ACTT
i Mus_caroli.LT608236.1                                 C 0 I 1
s Mus_musculus.chr16                                     75485088 31 +  98207768 --------------------------------t--------a-t---t-t-ttttttc-agaa-------a-a-----a--tatg--t-GGC-ACTT
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67549405 32 +  89017189 --------------------------------g--------aat---t-t-tattttc-agga-------a-a-----a--tgtg--t-GGC-ACTT
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74324507 32 +  97876770 --------------------------------c--------aat---t-t-tgttttc-agaa-------a-a-----a--tatg--t-GGC-ACTT
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              7957 37 +     98495 ------TC---A----TCC---AA-A------A--------ACT---T-T-TA--TAC-AGAA-------A-A-----A--T--T--T-AGC-ACCT
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 1 C 0
s Mustela_putorius.JH417978.1                             4420733 50 -  28371801 -T-A--CC---ACCAGTC----AG-T------TCAATTtctaca---t-t--t--t-c-agaa-------a-a-----aaat--t--t-agc-aCTT
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     86935 19 -    117718 ---------------------------------------------------------G-AGAA-------A-A-----A--T--A--TTAGC-AATT
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 26 C 0
s Myotis_brandtii.KE161952.1                               964756 36 +   8389877 -T-A--CT---A----TC----ga-g------t--------ata---t-t--t--t-c-agaa-------a-a-----a--t--t--t-agc-ACTT
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5016433 36 +   6462685 -T-A--CT---A----TC----ca-g------t--------ata---t-t--t--t-c-agaa-------a-a-----a--t--t--t-agC-ACTT
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3462342 36 -   3747815 -T-A--CT---A----TC----CA-g------t--------aca---t-t--t--t-c-agaa-------a-a-----a--t--t--t-agC-ACTT
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         7539 36 +     66751 -T-A--CT---A----TC----CA-G------T--------ATA---T-T--T--T-C-AGAA-------A-A-----A--T--T--T-AGC-ACTT
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             2296 26 -      8794 --------------------------------G--------ATG---T-T--T--T-G-ATCA-------A-A-----A--T--T--T-AGC-ACAT
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        I 11 C 0
s Nasalis_larvatus.k141_153429                               4609 39 +     48152 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-CT--T-C-AGAA-------A-A-----G--T--T--T-AAC-GTGT
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4481485 46 -  14209539 -T-A--CC---A----TC----AG-T------CCAATTtctaca---t-t--t--t-c-agaa-------a-a-----aaac--t--t-AGC-ACTT
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3948183 36 -   4490290 -T-A--CC---A----TC----CA-G------T--------ATG---C-T--T--T-C-AGAG-------A-A-----A--T--T--T-AGC-ATTC
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  46543 36 +     94413 -T-A--CC---C----TC----TA-G------A--------ACA---T-T--C--T-C-AGAA-------A-A-----A--T--T--T-AGT-ACTG
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1223136                          10376 39 -     11253 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-TT--T-C-AGAA-------A-A-----C--T--T--T-AAC-ATGT
i Nomascus_annamensis.k141_1223136                      C 0 C 0
s Nomascus_concolor.k141_468488                              1019 39 -      1482 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-TT--T-C-AGAA-------A-A-----C--T--T--T-AAC-ATGT
i Nomascus_concolor.k141_468488                         C 0 I 1
s Nomascus_gabriellae.k141_906566                            1008 39 -      2544 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-TT--T-C-AGAA-------A-A-----C--T--T--T-AAC-ATGT
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             21482 39 -  18771707 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-TT--T-C-AGAA-------A-A-----C--T--T--T-AAC-ATGT
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_844529                                   756 39 +      2124 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-TT--T-C-AGAA-------A-A-----C--T--T--T-AAC-ATGT
i Nomascus_siki_a.k141_844529                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                26942 38 +   3668941 -T-A--CC---A----TC----aa-g------t--------ata---t-t--t--t-c-agaa-------a-a-----aaat--t--t-agc-aCTT
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65563782 40 -  95554990 CC-A--TC---A----TCC---TA-G------G--------ACA---T-T-TT--T-CTAGCA-------A-A-----A--T--T--T-TGC-ACTT
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                             627 40 +      6470 CC-A--TC---A----TCC---TA-G------G--------ACA---T-T-TT--T-CTAGCA-------A-A-----A--T--T--T-TGC-ACTT
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65666151 40 +  89412551 CC-A--TC---A----TCC---TA-G------G--------ACA---T-T-TT--T-CTAGCA-------A-A-----A--T--T--T-TGC-ACTT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4992472 37 -  23139505 -T-A--TC---A----TCC---TA-G------G--------ACA---T-T-TC--C-C-CCCC-------A-A-----A--T--T--T-AGC-A-TT
i Ochotona_princeps.JH802095.1                          I 1 C 0
s Octodon_degus.JH651621.1                                3675608 17 +  10294119 ---------------------------------------------------------g-agaa-------a-c-----a--a--a--t-agc-aat-
i Octodon_degus.JH651621.1                              I 26 I 1232
s Odobenus_rosmarus.KB229369.1                             676143 46 -   3126709 -T-A--CC---A----TC----AG-T------CCAATTTctgca---t-t--t--t-c-agaa-------a-a-----aaac--t--t-aGC-ACTT
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1076941 36 +   1425656 -T-A--CC---A----TC----TG-G------T--------ACA---T-T--T--T-C-AGAG-------A-A-----A--T--A--C-AGC-GTTT
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         34105 36 +     78940 -T-A--CC---A----TC----TG-G------T--------ACG---T-T--T--T-C-AGAG-------A-A-----A--T--A--C-AGC-ATTT
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  121434 47 +    145789 TT-A--TC---A----CTC---AA-A------T--------AAT---T-T-TGTTTTC-AGAA----AAAA-A-----A--TGTG--T-GGC-ACTT
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  33375 49 +     62360 CC-A--TC---A----CCC---AA-A------T--------AAT---T-T-TATTTTC-AGAA--AAAAAA-A-----A--TGTG--T-AGC-ACTT
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7221867 36 -   7562323 -T-A--CC---A----TC----CA-G------T--------ATG---C-T--T--T-C-AGAG-------A-A-----A--T--T--T-AGC-ATTC
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              40327 38 -     66828 CT-A--TC---A----TCG---TA-A------G--------ACA---T-T--T--T-C-ATCA-------A-A-----C--T--T--T-ACC-ACAC
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141872456 38 + 163896628 -T-C--TC---A-----CC---AA-G------g--------aca---a-t-tt--t-c-agaa-------aaa-----a--t--t--t-agC-ACTT
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      304277 38 -    505867 -G-A--CC---A----TC----aa-g------t--------ata---t-t--t--t-c-agaa-------a-a-----aaat--t--t-agc-aCTT
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       35797 36 +     38679 -------C---T----TCC---TA-G------G--------ATG---T-T-TT--T-CTAGCA-------A-A-----A--T--T--T-CGC-ACTT
i Otolemur_crassicaudatus.k141_321880                   I 1 C 0
s Otolemur_garnettii.GL873528.1                          18005238 36 -  38779656 -------C---T----TCC---TA-G------G--------ATG---T-T-TT--T-CTAGCA-------A-A-----A--T--T--T-CGC-ACTT
i Otolemur_garnettii.GL873528.1                         I 1 C 0
s Ovis_aries.CM001582.2                                 134074521 36 - 275406953 -T-A--CC---A----TC----TG-G------T--------ACA---T-T--T--T-C-AGAG-------A-A-----A--T--A--C-AGC-ATTT
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      75735 36 +    140051 -T-A--CC---A----TC----TG-G------T--------ACA---T-T--T--T-C-AGAG-------A-A-----A--T--A--C-AGC-ATTT
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.AJFE02000950.1                                 371 39 -      1008 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-TT--T-C-AGAA-------A-A-----C--T--T--G-AAC-ATGT
i Pan_paniscus.AJFE02000950.1                           I 5 I 46
s Pan_troglodytes.KZ622857.1                               324224 39 +    772158 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-TT--T-C-AGAA-------A-A-----C--T--T--G-AAC-ATGT
i Pan_troglodytes.KZ622857.1                            I 63 I 46
s Panthera_onca.PanOnc_flattened_line_1615                  30740 24 +    295523 -T-A--TC---A----TC----AA-G------T--------ACA---T-T--T--T-C-AGAA-------A--------------------------
i Panthera_onca.PanOnc_flattened_line_1615              C 0 I 12
s Panthera_pardus.KV860323.1                              3634344 24 +  18214204 -T-A--TC---A----TC----AA-g------t--------aca---t-t--t--t-c-agaa-------a--------------------------
i Panthera_pardus.KV860323.1                            C 0 I 12
s Panthera_tigris.KE721879.1                              5024121 24 -   6340057 -T-A--TC---A----TC----Aa-g------t--------aca---t-t--t--t-c-agaa-------a--------------------------
i Panthera_tigris.KE721879.1                            C 0 I 12
s Pantholops_hodgsonii.KE114631.1                         1063379 36 -   1292953 -T-A--CC---A----TC----TG-G------t--------aca---t-t--t--t-c-agag-------a-a-----a--t--a--c-AGC-GTTT
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188152356 40 - 188283584 CT-A--TT---A----TCC---TA-G------A--------act--tt-t-tt--t-c-agaa-------a-a-----g--t--t--t-aAC-GTGT
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            48568 40 +     76494 CT-A--TT---A----TCC---TA-G------A--------ACTT--T-T-TT--T-C-AGAA-------A-A-----G--T--T--T-AAC-GTGT
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47509753 40 +  47705337 CT-A--TT---A----TCC---TA-G------A--------ACTT--T-T-TT--T-C-AGAA-------A-A-----G--T--T--T-AAC-GTGT
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 63735 40 -    104429 CT-A--TT---A----TCC---TA-G------A--------ACTT--T-T-TT--T-C-AGAA-------A-A-----G--T--T--T-AAC-GTGT
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  13521 40 -     29451 CT-A--TT---A----TCC---TA-G------A--------ACTT--T-T-TT--T-C-AGAA-------A-A-----G--T--T--T-AAC-GTGT
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                33924 40 +     35859 CT-A--TT---A----TCC---TA-G------A--------ACTT--T-T-TT--T-C-AGAA-------A-A-----G--T--T--T-AAC-GTGT
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    112073 37 -    135482 -T-A--TC---A----TC----AA-G------T--------ACA---T-T--T--T-C-AGAA-------A-A-----A-AT--T--T-AAC-ATTT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      39754 32 -     45160 CT-A--TT---A----TCC---AA-G------G--------ACA---TAT-TT--TTC-AGAA-------A-T-----A--T---------------
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 I 8
s Peromyscus_maniculatus.KI615518.1                       4946550 48 -   8017169 CC-A--TC---a----ccc---aa-a------t--------aat---t-t-tattttc-agaaaaaa---a-a-----a--tgtg--t-agc-aCTT
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            118484 36 -    122454 -T-A--CC---A----TC----CA-G------T--------ATG---C-T--T--T-C-AGAG-------A-A-----A--T--T--T-AGC-ATTC
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           1610 39 -      3310 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-CT--T-C-AGAA-------A-A-----G--T--T--T-AAC-ATGT
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       21516 39 -     82327 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-CT--T-C-AGAA-------A-A-----G--T--T--T-AAC-ATGT
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           18268 39 +     19957 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-CT--T-C-AGAA-------A-A-----G--T--T--T-AAC-ATGT
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26736277 39 +  26888534 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-CT--T-C-AGAA-------A-A-----G--T--T--T-AAC-ATGT
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            93529 36 +    112873 -T-A--TC---A----TC----CA-G------T--------ACA---T-T--T--T-C-AGTA-------A-A-----A--A--T--T-AGC-ACTT
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             40276 25 -     61926 -------------------------------------------T---T-T-TTT-T-C-AGAA-------A-A-----G--C--T--T-AAC-ATGT
i Pithecia_albicans.k141_991845                         I 156 C 0
s Pithecia_chrysocephala.k141_159118                        21705 25 +     78826 -------------------------------------------T---T-T-TTT-T-C-AGAA-------A-A-----G--C--T--T-AAC-ATGT
i Pithecia_chrysocephala.k141_159118                    I 156 C 0
s Pithecia_hirsuta.k141_1152968                              5656 25 -     15800 -------------------------------------------T---T-T-TTT-T-C-AGAA-------A-A-----G--C--T--T-AAC-ATGC
i Pithecia_hirsuta.k141_1152968                         I 156 C 0
s Pithecia_mittermeieri.k141_2119203                         8854 25 -     16101 -------------------------------------------T---T-T-TTT-T-C-AGAA-------A-A-----G--C--T--T-AAC-ATGC
i Pithecia_mittermeieri.k141_2119203                    I 156 C 0
s Pithecia_pissinattii.k141_1102319                          2163 25 +      9673 -------------------------------------------T---T-T-TTT-T-C-AGAA-------A-A-----G--C--T--T-AAC-ATGT
i Pithecia_pissinattii.k141_1102319                     I 156 C 0
s Pithecia_pithecia.tarseq_313                           13471157 25 -  19735023 -------------------------------------------T---T-T-TTT-T-C-AGAA-------A-A-----G--C--T--T-AAC-ATGT
i Pithecia_pithecia.tarseq_313                          I 156 C 0
s Pithecia_vanzolinii.k141_831006                           10065 25 -     31692 -------------------------------------------T---T-T-TTT-T-C-AGAA-------A-A-----G--C--T--T-AAC-ATGT
i Pithecia_vanzolinii.k141_831006                       I 156 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           2551 36 +     21690 -T-A--CC---A----TC----CA-G------T--------ATG---C-T--T--C-C-AGAG-------A-A-----A--T--T--G-AGC-ATTC
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       19465 24 +     44506 -------------------------------------------T---T-T-TT--T-C-AGAA-------A-A-----G--C--T--T-AAC-ACGT
i Plecturocebus_bernhardi.k141_959214                   I 164 C 0
s Plecturocebus_brunneus.k141_498086                        19683 24 +     67491 -------------------------------------------T---T-T-TT--T-C-AGAA-------A-A-----G--C--T--T-AAC-ATGT
i Plecturocebus_brunneus.k141_498086                    I 164 C 0
s Plecturocebus_caligatus.k141_2539816                       9928 24 -     98129 -------------------------------------------T---T-T-TT--T-C-AGAA-------A-A-----G--C--T--T-AAC-ATGT
i Plecturocebus_caligatus.k141_2539816                  I 164 C 0
s Plecturocebus_cinerascens.k141_744510                     19529 24 +    147771 -------------------------------------------T---T-T-TT--T-C-AGAA-------A-A-----G--C--T--T-AAC-ATGT
i Plecturocebus_cinerascens.k141_744510                 I 165 C 0
s Plecturocebus_cupreus.k141_1223294                        19779 24 -     23762 -------------------------------------------T---T-T-TT--T-C-AGAA-------A-A-----G--C--T--T-AAC-ATGT
i Plecturocebus_cupreus.k141_1223294                    I 164 C 0
s Plecturocebus_dubius.k141_3565563                           245 24 -     55515 -------------------------------------------T---T-T-TT--T-C-AGAA-------A-A-----G--C--T--T-AAC-ATGT
i Plecturocebus_dubius.k141_3565563                     N 0 C 0
s Plecturocebus_grovesi.k141_242819                         19598 24 +    152463 -------------------------------------------T---T-T-TT--T-C-AGAA-------A-A-----G--C--T--T-AAC-ATGT
i Plecturocebus_grovesi.k141_242819                     I 161 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      6358 24 +      8943 -------------------------------------------T---T-T-TT--T-C-AGAA-------A-A-----G--C--T--T-AAC-ATGT
i Plecturocebus_hoffmannsi.k141_1595076                 I 164 C 0
s Plecturocebus_miltoni.k141_841561                          9318 24 +    134592 -------------------------------------------T---T-T-TT--T-C-AGAA-------A-A-----G--C--T--T-AAC-ATGT
i Plecturocebus_miltoni.k141_841561                     I 164 C 0
s Plecturocebus_moloch.k141_890597                          19908 24 -     75465 -------------------------------------------T---T-T-TT--T-C-AGAA-------A-A-----G--C--T--T-AAC-ATGT
i Plecturocebus_moloch.k141_890597                      I 161 C 0
s Pongo_abelii.NDHI03003816.1                              183794 39 -    373494 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-TT--T-C-AGAA-------A-A-----C--C--T--T-AAC-ATGT
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19803698 39 +  19899266 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-TT--T-C-AGAA-------A-A-----C--C--T--T-AAC-ATGT
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               1847 39 -     15069 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-CT--T-C-AGAA-------A-A-----G--T--T--T-AAC-ATGT
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              1981 39 +     14865 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-CT--T-C-AGAA-------A-A-----G--T--T--T-AAC-ATGT
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                73172 38 +     78963 CT-G--CC---A----CCC---TA-G------G--------ATA---G-T--T--T-C-CTCA-------A-A-----A--T--T--T-AGG-ATGT
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6845186 39 +  12164890 CT-A--TC---A----TCC---Ta-g------g--------aca---t-t-tt--t-a-agaa-------a-a-----a--t--t--t-agt-aCTT
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     13621 40 -     30946 CT-A--TC---A----TCC---TA-g------g--------aca---t-t-tt--t-a-agat-------a-a-----a--t--t--t-agcaattt
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                          327 40 +     11805 CT-A--TC---A----TCC---TA-G------G--------ACA---T-T-TT--T-A-AGAA-------A-A-----A--T--T--T-AGCAATTT
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           39658 40 +     52369 CT-A--TC---A----TCC---TA-G------G--------ACA---T-T-TT--C-A-AGAA-------A-A-----A--T--T--T-AGCAATTT
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         32046 40 -     44753 CT-A--TC---A----TCC---TA-G------G--------ACA---T-T-TT--T-A-AGAA-------A-A-----A--T--T--T-AGCAATTT
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            13968 40 +     27322 CT-A--TC---A----TCC---TA-G------G--------ACA---T-T-TT--C-A-AGAA-------A-A-----A--T--T--T-AGCAATTT
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       13610 40 -     53241 CT-A--TC---A----TCC---TA-G------G--------ACA---T-T-TT--T-A-AGAA-------A-A-----A--T--T--T-AGCAATTT
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         35882 40 -     48185 CT-A--TC---A----TCC---TA-G------G--------ACA---T-T-TT--T-A-AGAT-------A-A-----A--T--T--T-AGCAATTT
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           29946 29 +     77221 TT-A--TC---A----ccc---aa-a------t--------aat---t-t-tgttttc-agaa----------------------------------
i Psammomys_obesus.NESX01026517.1                       C 0 I 14
s Pteronotus_parnellii.KE867983.1                            1091 36 -     27784 -T-A--CC---A----TC----ta-a------t--------aca---t-t--t--t-c-agaa-------a-a-----a--t--t--t-agt-ACTG
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        242605 50 -    344369 -T-A--CT---GCCAGTC----AG-T------TCAATTTCTACA---T-T--T--T-C-AGAA-------A-A-----AAAC--T--T-AGC-ACTT
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13243226 25 -  17261082 -----------------------------------------ata---t-t--t--t-c-agaa-------a-a-----t--t--t--t-agc-ACTT
i Pteropus_alecto.KB031157.1                            I 8 C 0
s Pteropus_vampyrus.KN525959.1                             601180 25 -   3946241 -----------------------------------------ata---t-t--t--t-c-agaa-------a-a-----t--t--t--t-agc-ACTT
i Pteropus_vampyrus.KN525959.1                          I 8 C 0
s Puma_concolor.QAVW01000427.1                          131530935 24 - 161321710 -T-A--TC---A----TC----Aa-g------t--------aca---t-t--t--t-c-agaa-------a--------------------------
i Puma_concolor.QAVW01000427.1                          C 0 I 12
s Pygathrix_cinerea.k141_374971                             25971 39 +     56732 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-CT--T-C-AGAA-------A-A-----G--T--T--T-ACC-GTGT
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6802461 39 +   6970761 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-CT--T-C-AGAA-------A-A-----G--T--T--T-AAT-GTGT
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             1853 39 +     18040 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-CT--T-C-AGAA-------A-A-----G--T--T--T-AAT-GTGT
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                13027 36 +     68503 -T-A--CC---A----TC----TG-G------T--------ACA---T-T--T--T-C-AGAG-------A-A-----G--T--A--C-AGC-GTTT
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13911330 32 +  90463843 --------------------------------t--------cat---t-t-tgttttc-agaa-------a-a-----a--tgGG--T-GGC-ATTT
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1784820 36 +   2252614 -T-A--CC---A----TC----Ta-c------t--------aca---t-t--t--t-c-agaa-------a-a-----a--c--t--t-AGC-ACTT
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           12409 39 -     14454 CT-A--TT---A----TCC---TA-G------A--------ACT---A-T-CT--T-C-AGAA-------A-A-----G--T--T--T-AAC-GTGT
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206373735 39 - 206558726 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-CT--T-C-AGAA-------A-A-----G--T--T--T-AAC-GTGT
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44851383 39 -  45163003 CT-A--TT---A----TCC---TA-G------A--------ACT---A-T-CT--T-C-AGAA-------A-A-----G--T--T--T-AAC-GTGT
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                16529 25 +    109198 -----------------------------------------ATA---T-T--T--T-C-AGAA-------A-A-----T--T--T--T-AGC-ACTT
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            I 8 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       4807 36 +     12214 -T-A--CC---A----TC----TG-G------T--------ACA---T-T--T--T-T-AGAG-------A-A-----A--T--A--C-AGC-ATTT
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15669366 24 -  43202129 -------------------------------------------T---T-T-TT--T-C-AGAA-------A-A-----G--C--T--t-aac-atgt
i Saimiri_boliviensis.NW_024100938.1                    I 194 C 0
s Saimiri_cassiquiarensis.k141_808270                        1232 24 +     34089 -------------------------------------------T---T-T-TT--T-C-AGAA-------A-A-----G--C--T--T-AAC-ATGT
i Saimiri_cassiquiarensis.k141_808270                   I 185 C 0
s Saimiri_macrodon.k141_2087127                              1175 24 -     60842 -------------------------------------------T---T-T-TT--T-C-AGAA-------A-A-----G--C--T--T-AAC-ATGT
i Saimiri_macrodon.k141_2087127                         I 197 C 0
s Saimiri_oerstedii.k141_841116                              1252 24 +     67014 -------------------------------------------T---T-T-TT--T-C-AGAA-------A-A-----G--C--T--T-AAC-ATGT
i Saimiri_oerstedii.k141_841116                         I 205 C 0
s Saimiri_sciureus.k141_1947592                              1248 24 +     60816 -------------------------------------------T---T-T-TT--T-C-AGAA-------A-A-----G--C--T--T-AAC-ATGT
i Saimiri_sciureus.k141_1947592                         I 201 C 0
s Saimiri_ustus.k141_1282476                                 1185 24 -     76454 -------------------------------------------T---T-T-TT--T-C-AGAA-------A-A-----G--C--T--T-AAC-ATGT
i Saimiri_ustus.k141_1282476                            I 210 C 0
s Sapajus_apella.ctg10                                   17337708 24 -  30362882 -------------------------------------------T---T-T-TT--T-G-AGAA-------A-A-----G--C--T--T-AAC-GTGT
i Sapajus_apella.ctg10                                  I 153 C 0
s Sapajus_macrocephalus.k141_966464                         17308 24 -     62485 -------------------------------------------T---T-T-TT--T-C-AGAA-------A-A-----G--C--T--T-AAC-GTGT
i Sapajus_macrocephalus.k141_966464                     I 152 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   28572 36 -    114521 -T-C--T----A----TC----TA-G------T--------ACA---T-T--A--A-A-AAAA-------A-A-----A--C--C--TTAAC-ACTA
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1527475                       24396 39 +     26421 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-CT--T-C-AGAA-------A-A-----G--T--T--T-AAC-ATGT
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       4857 39 +     20762 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-CT--T-C-AGAA-------A-A-----G--T--T--T-AAC-ATGT
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         38591 39 +     40653 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-CT--T-C-AGAA-------A-A-----G--T--T--T-AAC-ATGT
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                            9149 39 -     12194 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-CT--T-C-AGAA-------A-A-----G--T--T--T-AAC-ATGT
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     22569 39 -     27512 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-CT--T-C-AGAA-------A-A-----G--T--T--T-AAC-ATGT
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         31590 39 -     33692 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-CT--T-C-AGAA-------A-A-----G--T--T--T-AAC-ATGT
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   94639 20 -    120886 ---------------------------------------------------------C----A----AAGC-A-----A--TGTG--T-GGT-ACTT
i Sigmodon_hispidus.SigHis_scaffold_11332               I 18 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            14815 36 +    739146 -T-G--TC---A----TC----TA-G------T--------ACA---T-T--T--T-C-AGAA-------A-A-----A--A--T--T-TGT-GCTT
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17747496 11 -  27805282 ------------------------------------------------------------------------------a--t--t--t-agc-aatt
i Sorex_araneus.JH798170.1                              N 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2236579 40 +   2842873 CT-A--TC---A----TCC---AA-A------G--------ATC---T-T-TC--TAA-GGAT-------A-T-----A--T--C--T-AGT-ACCT
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             231601 51 -    276980 -T-A--CT---A----TC----AG-T------TCAATTTCCACA---C-T--T--T-C-AGAA-------A-AAAAAAAAAA--T--T-AGC-ACTT
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            24184 37 +     62062 -T-A--TC---A----TC----AA-G------T--------ACA---T-T--T--T-C-AGGA-------A-A-----A-AT--T--T-AGC-ATTT
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189269111 36 + 218635234 -T-A--CC---A----CC----TA-G------t--------gta---t-t--a--t-c-agaa-------a-a-----a--a--a--t-agt-attt
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                     13898541 39 +  13920577 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-TT--T-C-AGAA-------A-A-----C--T--T--T-AAC-ATGT
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               3024 36 -      6213 -T-A--CT---A----TC----TA-G------G--------ATG---C-T--T--T-C-AGAA-------A-A-----A--T--T--T-AGC-ACTT
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               11969 26 +     45698 --------------------------------G--------ATG---T-T--T--T-G-ATCA-------A-A-----A--T--T--T-AGC-ACAT
i Tamandua_tetradactyla.TamTet_scaffold_26877           I 11 C 0
s Tapirus_indicus.TapInd_scaffold_176                      803967 36 +   1148477 -T-A--TC---A----TC----TA-G------T--------ATA---T-T--T--T-C-AGAA-------A-A-----A--T--G--T-AGC-GCTT
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  54627 36 +     99546 -T-A--TC---A----TC----TA-G------T--------ATA---T-T--T--T-C-AGAA-------A-A-----A--T--G--T-AGC-ACTT
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               23312 36 +     42269 CA-A--TT---A----TCT---AA-T------G--------ACA---T-T-TT--T-C-GGAA-------A-A-----T--G--T--T-AGC-A---
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               56626 36 +     65473 CA-A--TT---A----TCT---AA-T------G--------ACA---T-T-TT--T-C-GGAA-------A-A-----T--G--T--T-AGC-A---
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194003891 41 - 194193292 CT-A--TT---A----TCC---TA-G------a--------act-ttt-t-tt--t-c-agaa-------a-a-----g--t--t--t-aAC-GTGT
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                   822 26 +      6782 --------------------------------A--------ATG---T-T--T--T-C-ATCA-------A-A-----A--T--T--T-AGC-ACAT
i Tolypeutes_matacus.TolMat_scaffold_269431             I 11 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  133101 33 -    259118 -------T---G----TC----TA-G------T--------ACA---T-T--T--T-C-AGAA-------A-A-----A--T--T--T-AGT-ACTA
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        22967 39 +     38948 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-CT--T-C-AGAA-------A-A-----G--T--T--T-AAC-ATAT
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   16694 39 -     32910 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-CT--T-C-AGAA-------A-A-----G--T--T--T-AAC-ATGT
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       22592 39 +     24652 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-CT--T-C-AGAA-------A-A-----G--T--T--T-AAC-ATAT
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      1477 39 -      3559 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-CT--T-C-AGAA-------A-A-----G--T--T--T-AAC-ATGT
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           39416 39 -     54611 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-CT--T-C-AGAA-------A-A-----G--T--T--T-AAC-ATGT
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       15415 39 +     17312 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-CT--T-C-AGAA-------A-A-----G--T--T--T-AAC-ATGT
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    22785 39 -     25040 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-CT--T-C-AGAA-------A-A-----G--T--T--T-AAC-ATGT
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          1451 39 +      3528 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-CT--T-C-AGAA-------A-A-----G--T--T--T-AAC-ATGT
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  47813 39 +     51589 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-CT--T-C-AGAA-------A-A-----G--T--T--T-AAC-ATGT
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       10981 39 +     14732 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-CT--T-C-AGAA-------A-A-----A--T--T--T-AAC-ATGT
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       1459 39 -     28054 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-CT--T-C-AGAA-------A-A-----G--T--T--T-AAC-ATGT
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44656254 39 -  44834318 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-CT--T-C-AGAA-------A-A-----G--T--T--T-AAC-ATGT
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        1264 39 +      3372 CT-A--TT---A----TCC---TA-G------A--------ACT---T-T-CT--T-C-AGAA-------A-A-----G--T--T--T-AAC-ATGT
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   2447 36 +     90398 -T-A--CC---A----TC----CA-G------T--------ACA---T-C--T--T-C-AGAG-------A-A-----A--A--T--C-AGC-ATTT
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16078553 38 +  31416278 CT-G--TC---A----TCC---TA-G------G--------aca---t-t--t--t-c-atca-------a-a-----a--t--t--t-agC-ACAC
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2788395 38 -   3938065 AT-A--TC---A----TCC---Ta-g------g--------ata---t-t-t---t-c-agaa-------a-a-----a--t--t--t-aaa-attc
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                     956 38 +     13056 AT-A--TC---A----TCC---TA-G------G--------ATA---T-T-T---T-C-AGAA-------A-A-----A--T--T--T-AAA-ATTC
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69310585 36 -  96451834 -T-A--CC---A----TC----CA-G------T--------ATG---C-T--T--T-C-AGAG-------A-A-----A--T--T--T-AGC-ATTC
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 23777 21 -     25548 -T-C--T----A----TC----TA-T------T--------AAT---T-T--A--A-A-AAA-----------------------------------
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 I 7
s Ursus_maritimus.KK498671.1                              6511193 46 +  28682327 -T-A--AC---A----TC----AG-T------TCAACAtctaca---t-t--t--t-c-agaa-------a-a-----aaat--t--t-agc-aCTT
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  2125 39 -     20643 CT-A--TC---A----TTC---TA-G------G--------ATA---T-T-TT--T-A-AGAA-------A-A-----A--T--T--T-AGC-ACTT
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             21670 39 -     33872 CT-A--TC---A----TTC---TA-G------G--------ATA---T-T-TT--T-A-AGAA-------A-A-----A--T--T--T-AGC-ACTT
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1521901 36 -   2331223 -T-A--CC---A----TC----Ta-g------t--------ata---t-t--t--t-c-agaa-------a-a-----a--t--t--c-agC-TCCT
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                134347 38 -    281493 -T-A--CC---A----TC----AA-G------T--------ATA---T-T--T--T-C-AGAA-------A-A-----AAAT--T--T-AGC-ACTT
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       123672 40 -    134049 CT-A--TC---A----TCC---AA-G------G--------TCC---T-T-TA--TAA-GGAT-------A-T-----A--T--T--T-AGC-ACCT
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        210872 46 -    227762 -T-A--CC---A----TC----AG-T------CCAATTTCTACA---T-T--T--T-T-AGGA-------A-A-----AAAC--T--T-AGC-ACTT
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           4088 36 -      8775 -T-A--CC---A----TC----CA-A------T--------ATG---C-T--T--T-C-AGAG-------A-A-----A--T--T--T-AGC-ATTC
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16291  1 -    119109 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     12283  2 -     20485 I
e Jaculus_jaculus.JH725517.1                              8561873  2 +  11848649 I
e Allactaga_bullata.AllBul_scaffold_70162                    8911  2 -     22067 I
e Perodicticus_potto.k141_713187                            21218  0 -     27972 C
e Perodicticus_ibeanus.k141_117958                           1921  0 -     23713 C
e Nannospalax_galili.KL201303.1                            107449  0 +    362372 C
e Dolichotis_patagonum.DolPat_scaffold_14102                33375  0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             56104 16 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                14631 16 +     26546 I
e Cavia_tschudii.CavTsc_scaffold_488                       173989  0 +    436027 C
e Cavia_porcellus.DS562889.1                             15795798  0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15783848 16 -  24422027 I
e Alouatta_seniculus.k141_990213                             3359 131 +      6429 I
e Alouatta_puruensis.k141_1374428                             441  0 -     25526 I
e Alouatta_palliata.k141_1316127                             6638 134 +     10410 I
e Alouatta_nigerrima.k141_2718643                            3354 131 +      7047 I
e Alouatta_macconnelli.k141_1331706                          6699 131 -     10438 I
e Alouatta_juara.k141_1856473                                5785 131 +      7227 I
e Alouatta_discolor.k141_811576                              7402 133 -     21359 I
e Alouatta_caraya.k141_5460                                  7844 129 -     11521 I
e Alouatta_belzebul.k141_1818029                             6727 133 -     18050 I

a score=0.000000
s hg38.chr4_GL000008v2_random                                8544 1 +    209709 A
s Acinonyx_jubatus.LLWD01000356.1                         2030631 1 +   3721120 a
i Acinonyx_jubatus.LLWD01000356.1                       I 12 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    108910 1 -    189883 A
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10653964 1 +  23371972 A
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7090668 1 -  16596857 A
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allenopithecus_nigroviridis.k141_3103707                  59568 1 +     61638 A
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        51376 1 +     53391 A
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         2100 1 +     72529 A
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          1676 1 +      3797 A
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3517386 1 +   4113121 A
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      387586 1 -    631301 A
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            28019 1 +     33004 A
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 59213 1 +     78111 A
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            2143 1 +     22701 A
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5746101 1 +   9889416 a
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             2682 1 -    104377 A
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               2691 1 +     23246 A
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                      573 1 +      5067 G
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      14707 1 +     17483 A
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 5687 1 -     29036 A
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9535955 1 +  39197703 A
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             57239 1 +     85812 A
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 8238 1 +     89302 A
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             12748 1 -     58268 A
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             60734 1 +    119057 A
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               2685 1 -     25888 A
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 3416 1 -     16375 A
i Avahi_laniger.k141_2840928                            C 0 I 31
s Balaenoptera_acutorostrata.KI537095.1                  26377339 1 +  51448160 A
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        2570 1 -     13118 A
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   40486 1 -     72089 A
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6556633 1 +   6870073 A
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138136864 1 - 161108492 A
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     569242 1 -    998990 A
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136292597 1 - 158972876 A
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1228218 1 -   1914593 A
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               110588 1 -    171031 A
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                  9614 1 +    125063 A
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                11662 1 -    216513 A
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        4202 1 -    134917 A
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3216856 1 -   8989139 A
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           394557 1 -  15254737 A
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2970294 1 +   6889770 A
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11515341 1 +  39901454 A
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   10358 1 +     87036 A
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11262000 1 -  35597290 A
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11084529 1 +  39895921 A
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16451563 1 -  44759192 A
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21322493 1 + 157394656 A
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135703720 1 - 157403528 A
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_647363                  1262 1 +      1887 A
i Capromys_pilorides.CapPil_scaffold_647363             C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               56763 1 +     67245 A
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   27276 1 +     33760 A
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   156078 1 -    276539 A
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18887428 1 -  29618158 A
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 4972 1 -     26817 A
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                 9215 1 +     25043 A
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4360550 1 +   7569818 A
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623          305 1 -      9338 A
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6551364 1 +   6739814 A
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      52841 1 -     54931 A
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         17825 1 -     19697 A
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         55356 1 -    107033 A
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        1797 1 -      3853 A
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          25730 1 +     30494 A
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           1754 1 -      4022 A
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          1647 1 -      3505 A
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           20451 1 +     35983 A
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11986973 1 +  12117833 A
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46473726 1 +  46592721 A
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      31553 1 +     33420 A
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        1589 1 -      3443 A
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      2580 1 -      4669 A
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        2380 1 -      4411 A
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         1905 1 -      4205 A
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_1070855           122 1 -      1715 A
i Chaetophractus_vellerosus.ChaVel_scaffold_1070855     C 0 C 0
s Cheirogaleus_major.k141_1157592                           55752 1 -     68416 A
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            4801 1 +     13308 A
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             2231 1 -     18223 A
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             19254 1 +     25473 A
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           38293 1 +     57117 A
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          42968 1 +     54541 A
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15958634 1 +  43084221 A
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         67809 1 +    196370 A
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          11990 1 +     40510 A
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15135186 1 -  15256731 A
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      30232 1 -     53260 A
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101140681 1 + 101219884 A
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                13745 1 -     21363 A
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           759051 1 +    964067 A
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_141308              5839 1 -     12508 a
i Chrysochloris_asiatica.ChrAsi_scaffold_141308         C 0 C 0
s Colobus_angolensis.KN985967.1                          10879260 1 +  10971483 A
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147660418 1 + 156195979 A
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            12404 1 +     23629 A
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60610013 1 +  78930452 A
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         36472 1 -     40477 A
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 274354 1 -    399297 A
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53025534 1 +  72327488 A
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             15998 1 -     19186 A
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            48659 1 -     70449 A
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  205073 1 -    956709 A
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 27330 1 -     67205 A
i Ctenomys_sociabilis.CteSoc_scaffold_19489             I 20 C 0
s Dasypus_novemcinctus.JH568778.1                          178933 1 -   6883506 A
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16841623 1 +  31942871 A
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80034085 1 -  96802777 A
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18696078 1 -  18957592 A
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 319212 1 +    993696 A
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_170113                  470 1 +       818 A
i Diceros_bicornis.DicBicMic_scaffold_170113            C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   154503 1 +    228994 A
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3652251 1 +   4240102 G
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 23805 1 +     28912 G
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Echinops_telfairi.JH980316.1                           22991343 1 -  44670279 A
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                  9455 1 +     24177 A
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1488754 1 +   1727528 A
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7803510 1 +  15467074 A
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        236002 1 -    369425 A
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           3009 1 -      7838 A
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85868390 1 +  99434291 A
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Equus_asinus.JREZ01000062.1                             5849941 1 -   7175178 A
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13348444 1 +  41866177 A
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                           9934 1 +     92910 A
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11529530 1 +  16010500 A
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48767365 1 -  48907691 A
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          312223 1 +    330699 A
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             58652 1 +     89355 A
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              1824 1 +     13586 A
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               1760 1 -      6809 A
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             8232 1 +     36558 A
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             4548 1 +     60246 A
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 8036 1 +    109717 A
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               12410 1 +     16540 A
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                12687 1 +     27497 A
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           15148 1 +     26808 A
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                29876 1 +     46535 A
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              12599 1 -     29447 A
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129889611 1 - 159252932 a
i Felis_catus.CM001386.2                                I 12 C 0
s Felis_catus_fca126.CM031420.1                         129276685 1 - 158578461 a
i Felis_catus_fca126.CM031420.1                         I 12 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 17820 1 +     52776 A
i Felis_nigripes.FelNig_flattened_line_8080             I 12 C 0
s Fukomys_damarensis.KN123630.1                          13889817 1 -  19261668 a
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     207765 1 -    847004 A
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           10145 1 -     43889 A
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           7197 1 +     27357 A
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               153076 1 +    324696 A
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    178269 1 -    189561 A
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                            9481 1 -     18683 T
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               1939 1 -     14630 A
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119649037 1 - 195582420 A
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   74035 1 +    118900 A
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                         2365 1 +      3980 A
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             24845 1 +     26611 A
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             2299 1 +     56096 A
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        25572 1 -     42470 A
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        42169 1 -     54384 A
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              13864 1 +     53719 A
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                24755 1 -     91191 A
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2547951 1 +  31725842 a
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               53346 1 +     73687 T
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              144339 1 +    277961 A
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      275771 1 -    477199 A
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              4926 1 -      9143 A
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg649                                    98609 1 +    115816 G
i Hoolock_leuconedys.ctg649                                C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 12933 1 -     67322 A
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hylobates_abbotti.k141_493872                              1746 1 +      5897 G
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_282275                                960 1 +      1846 G
i Hylobates_agilis.k141_282275                          I 39 C 0
s Hylobates_klossii.k141_584463                               123 1 -      1009 G
i Hylobates_klossii.k141_584463                         C 0 C 0
s Hylobates_muelleri.k141_1133650                            1181 1 -      2775 G
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             29783 1 -     60944 G
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     2905 1 +     22540 A
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7122695 1 +  13083262 G
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_3334527                                   8814 1 +      9207 A
i Indri_indri.k141_3334527                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               6012 1 +     17520 A
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               20844 1 +     37189 A
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          46808 1 -    147782 A
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   110953 1 -    115756 A
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258403851 1 - 285822530 A
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        20749 1 +     39228 A
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            50123 1 +     63517 A
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        75345 1 +    116806 A
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     28386 1 -     33031 A
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3082632 1 -   3498232 A
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                     9845 1 +     22452 A
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            133187 1 +   3060487 A
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19244452 1 +  19376315 A
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            7492 1 +     84689 A
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3775243 1 +   6799190 A
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20587919 1 -  62548349 T
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11083985 1 +  39895028 A
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             16135 1 +     74745 A
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12702641 1 +  12821369 A
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               4737 1 +      6569 A
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           43038 1 +     63263 A
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_1068107                               11614 1 +     12679 A
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                1187 1 +      3017 A
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  42799 1 -     79256 A
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196031717 1 + 196197964 A
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11441823 1 +  11645122 A
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   1746 1 -     46448 A
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                1576 1 -      3617 A
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 11909 1 -     55006 A
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43836946 1 +  43892939 A
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                4169 1 -      5978 A
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               1751 1 -     27140 A
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43433612 1 -  43563597 A
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4446438 1 -   4543643 A
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            143250 1 +    252755 A
i Manis_javanica.JSZB01003966.1                         I 1 C 0
s Manis_pentadactyla.KN017078.1                             33315 1 +     58827 A
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36870542 1 +  64221397 G
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       61529 1 -    234502 A
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_1828            225888 1 -    226874 A
i Mellivora_capensis.MelCap_flattened_line_1828         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233                8455 1 +     15977 A
i Meriones_unguiculatus.MerUng_scaffold_52233           I 14 C 0
s Mesocricetus_auratus.KB708139.1                         1043265 1 -  26018355 A
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_183284                    883 1 +      2166 A
i Mesoplodon_bidens.MesBid_scaffold_183284              C 0 C 0
s Microcebus_murinus.CM007691.1                          16506968 1 +  47401472 A
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  28289 1 -     48017 A
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               19924 1 -     32043 A
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22816149 1 -  98408828 A
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8206646 1 +  10048721 A
i Miniopterus_natalensis.LDJU01000022.1                 I 8 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            31327 1 +     45743 A
i Miniopterus_schreibersii.MinSch_scaffold_24116        I 8 C 0
s Miopithecus_ogouensis.k141_2666161                        32284 1 +     34273 A
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         7930 1 -    104932 A
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     2381 1 +      8497 A
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 143610 1 +    154973 A
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                158463 1 +    265003 a
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 1854 1 -      4346 A
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  141554 1 -    168139 A
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          16465 1 -    100666 A
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70761997 1 +  92629107 A
i Mus_caroli.LT608236.1                                 I 1 C 0
s Mus_musculus.chr16                                     75485119 1 +  98207768 A
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67549437 1 +  89017189 C
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74324539 1 +  97876770 A
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              7994 1 +     98495 A
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4420783 1 -  28371801 A
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     86954 1 -    117718 A
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               964792 1 +   8389877 A
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5016469 1 +   6462685 A
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3462378 1 -   3747815 A
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         7575 1 +     66751 A
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             2322 1 -      8794 A
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nasalis_larvatus.k141_153429                               4648 1 +     48152 A
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4481531 1 -  14209539 A
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3948219 1 -   4490290 A
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  46579 1 +     94413 A
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1223136                          10415 1 -     11253 G
i Nomascus_annamensis.k141_1223136                      C 0 C 0
s Nomascus_concolor.k141_190193                               670 1 -      1094 A
i Nomascus_concolor.k141_190193                         I 44 I 138
s Nomascus_gabriellae.k141_906566                            1047 1 -      2544 A
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             21521 1 -  18771707 G
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_844529                                   795 1 +      2124 G
i Nomascus_siki_a.k141_844529                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                26980 1 +   3668941 A
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65563822 1 -  95554990 A
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                             667 1 +      6470 A
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65666191 1 +  89412551 A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4992509 1 -  23139505 A
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3676857 1 +  10294119 a
i Octodon_degus.JH651621.1                              I 1232 C 0
s Odobenus_rosmarus.KB229369.1                             676189 1 -   3126709 A
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1076977 1 +   1425656 A
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         34141 1 +     78940 A
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  121481 1 +    145789 A
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  33424 1 +     62360 A
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7221903 1 -   7562323 A
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              40365 1 -     66828 A
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141872494 1 + 163896628 A
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      304315 1 -    505867 A
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       35833 1 +     38679 A
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18005274 1 -  38779656 A
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134074557 1 - 275406953 A
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      75771 1 +    140051 A
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127571279 1 - 205426864 A
i Pan_paniscus.CM003386.1                               I 39 C 0
s Pan_troglodytes.CM009241.2                            120148426 1 - 196562556 A
i Pan_troglodytes.CM009241.2                            I 39 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  30776 1 +    295523 A
i Panthera_onca.PanOnc_flattened_line_1615              I 12 C 0
s Panthera_pardus.KV860323.1                              3634380 1 +  18214204 a
i Panthera_pardus.KV860323.1                            I 12 C 0
s Panthera_tigris.KE721879.1                              5024157 1 -   6340057 a
i Panthera_tigris.KE721879.1                            I 12 C 0
s Pantholops_hodgsonii.KE114631.1                         1063415 1 -   1292953 A
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188152396 1 - 188283584 A
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            48608 1 +     76494 A
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47509793 1 +  47705337 A
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 63775 1 -    104429 A
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  13561 1 -     29451 A
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                33964 1 +     35859 A
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    112110 1 -    135482 A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      39794 1 -     45160 G
i Perognathus_longimembris.PerPac_flattened_line_22291  I 8 C 0
s Peromyscus_maniculatus.KI615518.1                       4946598 1 -   8017169 A
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            118520 1 -    122454 A
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           1649 1 -      3310 A
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       21555 1 -     82327 A
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           18307 1 +     19957 A
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26736316 1 +  26888534 A
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            93565 1 +    112873 G
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             40301 1 -     61926 G
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        21730 1 +     78826 G
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              5681 1 -     15800 G
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                         8879 1 -     16101 G
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          2188 1 +      9673 G
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13471182 1 -  19735023 G
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           10090 1 -     31692 G
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           2587 1 +     21690 A
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       19489 1 +     44506 A
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        19707 1 +     67491 A
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                       9952 1 -     98129 A
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     19553 1 +    147771 A
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        19803 1 -     23762 A
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                           269 1 -     55515 A
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         19622 1 +    152463 A
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      6382 1 +      8943 A
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                          9342 1 +    134592 A
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          19932 1 -     75465 A
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              183833 1 -    373494 A
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19803737 1 +  19899266 A
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               1886 1 -     15069 A
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              2020 1 +     14865 A
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                73210 1 +     78963 T
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6845225 1 +  12164890 A
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     13661 1 -     30946 a
i Propithecus_coquerelli.NW_012147863.1                 C 0 I 34
s Propithecus_coronatus.k141_1353159                          367 1 +     11805 A
i Propithecus_coronatus.k141_1353159                    C 0 I 11
s Propithecus_diadema.k141_577245                           39698 1 +     52369 A
i Propithecus_diadema.k141_577245                       C 0 I 11
s Propithecus_edwardsi.k141_1317105                         32086 1 -     44753 A
i Propithecus_edwardsi.k141_1317105                     C 0 I 11
s Propithecus_perrieri.k141_7554                            14008 1 +     27322 A
i Propithecus_perrieri.k141_7554                        C 0 I 11
s Propithecus_tattersalli.k141_907138                       13650 1 -     53241 A
i Propithecus_tattersalli.k141_907138                   C 0 I 11
s Propithecus_verreauxi.k141_158021                         35922 1 -     48185 A
i Propithecus_verreauxi.k141_158021                     C 0 I 11
s Psammomys_obesus.NESX01026517.1                           29989 1 +     77221 A
i Psammomys_obesus.NESX01026517.1                       I 14 C 0
s Pteronotus_parnellii.KE867983.1                            1127 1 -     27784 A
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        242655 1 -    344369 A
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13243251 1 -  17261082 A
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             601205 1 -   3946241 A
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131530971 1 - 161321710 a
i Puma_concolor.QAVW01000427.1                          I 12 C 0
s Pygathrix_cinerea.k141_374971                             26010 1 +     56732 A
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6802500 1 +   6970761 A
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             1892 1 +     18040 A
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                13063 1 +     68503 A
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13911362 1 +  90463843 A
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1784856 1 +   2252614 A
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           12448 1 -     14454 A
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206373774 1 - 206558726 A
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44851422 1 -  45163003 A
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                16554 1 +    109198 A
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       4843 1 +     12214 A
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15669390 1 -  43202129 a
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        1256 1 +     34089 A
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              1199 1 -     60842 A
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              1276 1 +     67014 A
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              1272 1 +     60816 A
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 1209 1 -     76454 A
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17337732 1 -  30362882 A
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         17332 1 -     62485 A
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   28608 1 -    114521 A
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1527475                       24435 1 +     26421 A
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       4896 1 +     20762 A
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         38630 1 +     40653 A
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                            9188 1 -     12194 A
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     22608 1 -     27512 A
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         31629 1 -     33692 A
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   94659 1 -    120886 T
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            14851 1 +    739146 A
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17747507 1 -  27805282 a
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2236619 1 +   2842873 G
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             231652 1 -    276980 A
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            24221 1 +     62062 A
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189269147 1 + 218635234 a
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                     13898580 1 +  13920577 G
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               3060 1 -      6213 A
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               11995 1 +     45698 A
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      804003 1 +   1148477 A
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  54663 1 +     99546 A
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194003932 1 - 194193292 A
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                   848 1 +      6782 A
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  133134 1 -    259118 A
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        23006 1 +     38948 A
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   16733 1 -     32910 A
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       22631 1 +     24652 A
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      1516 1 -      3559 A
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           39455 1 -     54611 A
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       15454 1 +     17312 A
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    22824 1 -     25040 A
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          1490 1 +      3528 A
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  47852 1 +     51589 A
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       11020 1 +     14732 A
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       1498 1 -     28054 A
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44656293 1 -  44834318 A
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        1303 1 +      3372 A
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   2483 1 +     90398 A
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16078591 1 +  31416278 T
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2788433 1 -   3938065 a
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                     994 1 +     13056 A
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69310621 1 -  96451834 A
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 23805 1 -     25548 A
i Uropsilus_gracilis.UroGra_scaffold_4143_0             I 7 C 0
s Ursus_maritimus.KK498671.1                              6511239 1 +  28682327 A
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  2164 1 -     20643 A
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             21709 1 -     33872 A
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1521937 1 -   2331223 A
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                134385 1 -    281493 A
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       123712 1 -    134049 G
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        210918 1 -    227762 A
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           4124 1 -      8775 A
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16291 1 -    119109 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     12283 2 -     20485 I
e Jaculus_jaculus.JH725517.1                              8561873 2 +  11848649 I
e Allactaga_bullata.AllBul_scaffold_70162                    8911 2 -     22067 I
e Tarsius_wallacei.k141_48636                               56662 0 +     65473 C
e Tarsius_lariang.k141_609102                               23348 0 +     42269 C
e Perodicticus_potto.k141_713187                            21218 0 -     27972 C
e Perodicticus_ibeanus.k141_117958                           1921 0 -     23713 C
e Nannospalax_galili.KL201303.1                            107449 0 +    362372 C
e Dolichotis_patagonum.DolPat_scaffold_14102                33375 0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             56104 16 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                14631 16 +     26546 I
e Cephalopachus_bancanus.k141_702587                         4903 0 +     21754 C
e Cavia_tschudii.CavTsc_scaffold_488                       173989 0 +    436027 C
e Cavia_porcellus.DS562889.1                             15795798 0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15783848 16 -  24422027 I
e Carlito_syrichta.NW_007248099.1                          305857 0 +    345090 C
e Avahi_peyrierasi.k141_767228                               9383 14 -      9688 I
e Alouatta_seniculus.k141_990213                             3359 131 +      6429 I
e Alouatta_puruensis.k141_1374428                             441 0 -     25526 I
e Alouatta_palliata.k141_1316127                             6638 134 +     10410 I
e Alouatta_nigerrima.k141_2718643                            3354 131 +      7047 I
e Alouatta_macconnelli.k141_1331706                          6699 131 -     10438 I
e Alouatta_juara.k141_1856473                                5785 131 +      7227 I
e Alouatta_discolor.k141_811576                              7402 133 -     21359 I
e Alouatta_caraya.k141_5460                                  7844 129 -     11521 I
e Alouatta_belzebul.k141_1818029                             6727 133 -     18050 I

a score=0.000000
s hg38.chr4_GL000008v2_random                                8545  7 +    209709 T-TGAAA-------------T
s Acinonyx_jubatus.LLWD01000356.1                         2030632  7 +   3721120 t-tgaaa-------------t
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    108911  7 -    189883 C-TGCAA-------------A
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10653965  7 +  23371972 T-TGAAA-------------T
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7090669  7 -  16596857 A-TGAAA-------------T
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allenopithecus_nigroviridis.k141_3103707                  59569  7 +     61638 T-GGAAA-------------T
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        51377  7 +     53391 T-GGAAA-------------T
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         2101  7 +     72529 T-GGAAA-------------T
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          1677  7 +      3797 T-GGAAA-------------T
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             6860  4 -     18050 ----AAA-------------A
i Alouatta_belzebul.k141_1818029                        I 133 C 0
s Alouatta_caraya.k141_5460                                  7973  4 -     11521 ----aaa-------------a
i Alouatta_caraya.k141_5460                             I 129 C 0
s Alouatta_discolor.k141_811576                              7535  4 -     21359 ----AAA-------------A
i Alouatta_discolor.k141_811576                         I 133 C 0
s Alouatta_juara.k141_1856473                                5916  4 +      7227 ----AAA-------------A
i Alouatta_juara.k141_1856473                           I 131 C 0
s Alouatta_macconnelli.k141_1331706                          6830  4 -     10438 ----AAA-------------A
i Alouatta_macconnelli.k141_1331706                     I 131 C 0
s Alouatta_nigerrima.k141_2718643                            3485  4 +      7047 ----AAA-------------A
i Alouatta_nigerrima.k141_2718643                       I 131 C 0
s Alouatta_palliata.k141_1316127                             6772  4 +     10410 ----AAA-------------A
i Alouatta_palliata.k141_1316127                        I 134 C 0
s Alouatta_puruensis.k141_1284840                             570  4 -      4927 ----aaa-------------a
i Alouatta_puruensis.k141_1284840                       I 257 C 0
s Alouatta_seniculus.k141_990213                             3490 17 +      6429 ----AAACAAACAAAAAAAAA
i Alouatta_seniculus.k141_990213                        I 131 C 0
s Ammotragus_lervia.NIVO01013474.1                        3517387  7 +   4113121 T-TAAAA-------------T
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      387587  7 -    631301 G-TGGAA-------------C
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            28020  7 +     33004 T-TAAAA-------------T
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 59214  7 +     78111 T-TGAAA-------------T
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            2144  7 +     22701 T-TGAAA-------------T
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5746102  7 +   9889416 t-tgaaa-------------t
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             2683  7 -    104377 T-TGAAA-------------T
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               2692  7 +     23246 T-TGAAA-------------T
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                      574  7 +      5067 C-CAAAA-------------T
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 I 6
s Arctocebus_calabarensis.k141_1161114                      14708  7 +     17483 T-TGAAA-------------T
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 5688  7 -     29036 A-TGGGA-------------C
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9535956  7 +  39197703 T-TGAAA-------------T
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             57240  7 +     85812 T-TGAAA-------------T
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 8239  7 +     89302 T-TGAAA-------------T
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             12749  7 -     58268 T-TGAAA-------------T
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             60735  7 +    119057 T-TGAAA-------------T
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               2686  7 -     25888 T-TGAAA-------------T
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 3448  7 -     16375 T-TAGAA-------------T
i Avahi_laniger.k141_2840928                            I 31 C 0
s Avahi_peyrierasi.k141_767228                               9397  7 -      9688 T-TAGAA-------------T
i Avahi_peyrierasi.k141_767228                          I 14 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26377340  7 +  51448160 T-TAAAA-------------T
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        2571  7 -     13118 T-TAAAA-------------T
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   40487  7 -     72089 T-TAAAA-------------T
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6556634  7 +   6870073 T-TAAAA-------------T
i Bison_bison.KN264915.1                                C 0 I 5
s Bos_indicus.CM003021.1                                138136865  7 - 161108492 T-TAAAA-------------T
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     569243  7 -    998990 T-TAAAA-------------T
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136292598  7 - 158972876 T-TAAAA-------------T
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1228219  7 -   1914593 T-TAAAA-------------T
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               110589  7 -    171031 T-TGAAA-------------T
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                  9615  7 +    125063 T-TGAAA-------------T
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                11663  7 -    216513 T-TGAAA-------------T
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        4203  7 -    134917 T-TGAAA-------------T
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3216857  8 -   8989139 TTTAAAA-------------T
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           394558  8 -  15254737 TTTAAAA-------------T
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2970295  8 +   6889770 TTTAAAA-------------T
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11515342  7 +  39901454 T-TGAAA-------------T
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   10359  7 +     87036 T-TGAAA-------------T
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11262001  7 -  35597290 T-TGAAA-------------T
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11084530  7 +  39895921 T-TGAAA-------------T
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16451564  7 -  44759192 T-TGAAA-------------T
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21322494  7 + 157394656 T-TAAAA-------------T
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135703721  7 - 157403528 T-TAAAA-------------T
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_647363                  1263  7 +      1887 C-TAAAA-------------T
i Capromys_pilorides.CapPil_scaffold_647363             C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               56764  7 +     67245 A-TGGGA-------------C
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   27277  7 +     33760 C-TGGAA-------------T
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   156079  6 -    276539 T-TA-AA-------------T
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18887429  7 -  29618158 T-TGAAA-------------T
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 4973  7 -     26817 T-TGAAA-------------T
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                 9216  7 +     25043 T-TGAAA-------------T
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4360551  7 +   7569818 T-TGAAA-------------G
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623          306  7 -      9338 T-TGAAA-------------G
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6551365  7 +   6739814 T-GGAAA-------------T
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      52842  7 -     54931 T-GGAAA-------------T
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         17826  7 -     19697 T-GGAAA-------------T
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         55357  7 -    107033 T-GGAAA-------------T
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        1798  7 -      3853 T-GGAAA-------------T
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          25731  7 +     30494 T-GGAAA-------------T
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           1755  7 -      4022 T-GGAAA-------------T
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          1648  7 -      3505 T-AGAAA-------------T
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           20452  7 +     35983 T-GGAAA-------------T
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11986974  7 +  12117833 T-GGAAA-------------T
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46473727  7 +  46592721 T-GGAAA-------------T
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      31554  7 +     33420 T-GGAAA-------------T
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        1590  7 -      3443 T-GGAAA-------------T
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      2581  7 -      4669 T-GGAAA-------------T
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        2381  7 -      4411 T-GGAAA-------------T
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         1906  7 -      4205 T-GGAAA-------------T
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_1070855           123  6 -      1715 T--GAGA-------------T
i Chaetophractus_vellerosus.ChaVel_scaffold_1070855     C 0 C 0
s Cheirogaleus_major.k141_1157592                           55753  7 -     68416 T-TGAAA-------------T
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            4802  7 +     13308 T-TGAAA-------------T
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             2232  7 -     18223 T-TGAAA-------------C
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             19255  7 +     25473 T-TGAAA-------------C
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           38294  7 +     57117 T-TGAAA-------------C
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          42969  7 +     54541 T-TGAAA-------------C
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15958635  7 +  43084221 C-TGAAA-------------T
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         67810  7 +    196370 T-TGAAA-------------T
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          11991  7 +     40510 T-TGAAA-------------T
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15135187  7 -  15256731 T-GGAAA-------------T
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      30233  7 -     53260 T-GGAAA-------------T
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101140682  7 + 101219884 T-GGAAA-------------T
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                13746  6 -     21363 T--GAAA-------------T
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           759052  6 +    964067 T--GAAA-------------T
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_141308              5840  7 -     12508 c-caaga-------------g
i Chrysochloris_asiatica.ChrAsi_scaffold_141308         C 0 C 0
s Colobus_angolensis.KN985967.1                          10879261  7 +  10971483 T-GGAAA-------------T
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147660419  7 + 156195979 T-GGAAA-------------T
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            12405  7 +     23629 T-GGAAA-------------T
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60610014  7 +  78930452 T-TGAAA-------------T
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         36473  7 -     40477 G-TGAAA-------------T
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 274355  6 -    399297 C-TGAA--------------A
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53025535  7 +  72327488 C-TGAAA-------------A
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             15999  7 -     19186 T-TTAAG-------------G
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            48660  7 -     70449 T-TGAAA-------------T
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  205074  7 -    956709 A-TGAAA-------------T
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 I 6
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 27331  7 -     67205 C-TAAAA-------------T
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          178934  6 -   6883506 T--GAAA-------------T
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16841624  7 +  31942871 T-TGAAA-------------T
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80034086  7 -  96802777 T-TAAAA-------------T
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18696079  7 -  18957592 A-TGGAA-------------C
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 319213  7 +    993696 T-TGAAA-------------T
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_170113                  471  7 +       818 T-TGAAA-------------G
i Diceros_bicornis.DicBicMic_scaffold_170113            C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   154504  7 +    228994 C-TGAGA-------------T
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3652252  7 +   4240102 C-TACAA-------------T
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 23806  7 +     28912 C-TACAA-------------T
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Echinops_telfairi.JH980316.1                           22991344  7 -  44670279 T-TTAAA-------------T
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                  9456  7 +     24177 T-TGAAA-------------T
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1488755  7 +   1727528 T-TAAAA-------------T
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7803511  7 +  15467074 T-ATATA-------------G
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        236003  7 -    369425 C-AGGAA-------------A
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           3010  7 -      7838 C-AGGAA-------------A
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85868391  7 +  99434291 T-TGAAA-------------T
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Equus_asinus.JREZ01000062.1                             5849942  7 -   7175178 T-TGAAA-------------T
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13348445  7 +  41866177 T-TGAAA-------------T
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                           9935  7 +     92910 T-TGAAA-------------T
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11529531  7 +  16010500 T-TGAAA-------------T
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48767366  7 -  48907691 T-GGAAA-------------T
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          312224  7 +    330699 T-TAAAA-------------T
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             58653  7 +     89355 T-TAAAA-------------T
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              1825  7 +     13586 T-TAAAA-------------T
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               1761  7 -      6809 T-TAAAA-------------T
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             8233  7 +     36558 T-TAAAA-------------T
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             4549  7 +     60246 T-TAAAA-------------T
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 8037  7 +    109717 T-TAAAA-------------T
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               12411  7 +     16540 T-TAAAA-------------T
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                12688  7 +     27497 T-TAAAA-------------T
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           15149  7 +     26808 T-TAAAA-------------T
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                29877  7 +     46535 T-TAAAA-------------T
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              12600  7 -     29447 T-TAAAA-------------T
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129889612  7 - 159252932 t-tgaaa-------------t
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129276686  7 - 158578461 t-tgaaa-------------t
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 17821  7 +     52776 T-TGAAA-------------T
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13889818  7 -  19261668 c-TGATA-------------T
i Fukomys_damarensis.KN123630.1                         C 0 I 6
s Galago_moholi.ctg555                                     207766  7 -    847004 T-GGAAG-------------T
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           10146  7 -     43889 T-GGAAG-------------T
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           7198  7 +     27357 T-TGAAA-------------T
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               153077  7 +    324696 T-TGCAA-------------T
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    178270  7 -    189561 T-TAAAA-------------T
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                            9482  7 -     18683 C-TGAAA-------------T
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               1940  7 -     14630 T-TGAAA-------------T
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119649038  7 - 195582420 T-TGAAA-------------T
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   74036  7 +    118900 C-TGAAA-------------T
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                         2366  7 +      3980 T-TGAAA-------------T
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             24846  7 +     26611 T-TGAAA-------------T
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             2300  7 +     56096 T-TGAAA-------------T
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        25573  7 -     42470 T-TGAAA-------------T
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        42170  7 -     54384 T-TGAAA-------------T
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              13865  7 +     53719 T-TGAAA-------------T
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                24756  7 -     91191 T-TAAAA-------------T
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2547952  7 +  31725842 t-TGAAA-------------T
i Heterocephalus_glaber.JH602058.1                      C 0 I 13
s Heterohyrax_brucei.HetBruBak_scaffold_25354               53347  7 +     73687 T-CTAAA-------------T
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              144340  7 +    277961 T-TAAAA-------------T
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      275772  7 -    477199 T-TGAAA-------------T
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              4927  7 -      9143 T-TGAAA-------------T
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg649                                    98610  7 +    115816 T-TGAAA-------------T
i Hoolock_leuconedys.ctg649                                C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 12934  7 -     67322 T-TGAAA-------------T
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hylobates_abbotti.k141_493872                              1747  7 +      5897 T-TGAAA-------------T
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_282275                                961  7 +      1846 T-TGAAA-------------T
i Hylobates_agilis.k141_282275                          C 0 C 0
s Hylobates_klossii.k141_584463                               124  7 -      1009 T-TGAAA-------------T
i Hylobates_klossii.k141_584463                         C 0 I 34
s Hylobates_muelleri.k141_1133650                            1182  7 -      2775 T-TGAAA-------------T
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             29784  7 -     60944 T-TGAAA-------------T
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     2906  7 +     22540 C-GGAAA-------------T
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7122696  7 +  13083262 C-TAAAA-------------A
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_3334527                                   8815  7 +      9207 T-TGAAA-------------T
i Indri_indri.k141_3334527                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               6013  7 +     17520 T-TAAAA-------------T
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               20845  7 +     37189 T-TAAAA-------------T
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          46809  7 -    147782 T-TGAAA-------------T
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   110954  7 -    115756 A-TGGAA-------------T
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258403852  7 - 285822530 T-TGAAA-------------T
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        20750  7 +     39228 T-TGAAA-------------T
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            50124  7 +     63517 T-TGAAA-------------T
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        75346  7 +    116806 T-TGAAA-------------T
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     28387  7 -     33031 T-TGAAA-------------T
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3082633  7 -   3498232 C-TGAAA-------------T
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                     9846  7 +     22452 T-TGAAA-------------T
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            133188  7 +   3060487 T-TAAAA-------------T
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19244453  7 +  19376315 T-GGAAA-------------T
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            7493  7 +     84689 T-TGAAA-------------T
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3775244  7 +   6799190 T-TGAAA-------------T
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20587920  7 -  62548349 T-CTAAA-------------t
i Loxodonta_africana.GL010040.1                         C 0 I 185
s Lycaon_pictus.CM007556.1                               11083986  7 +  39895028 T-TGAAA-------------T
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             16136  7 +     74745 T-GGAAA-------------T
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12702642  7 +  12821369 T-GGAAA-------------T
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               4738  7 +      6569 T-GGAAA-------------T
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           43039  7 +     63263 T-GGAAA-------------T
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_1068107                               11615  7 +     12679 T-GGAAA-------------T
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                1188  7 +      3017 T-GGAAA-------------T
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  42800  7 -     79256 T-GGAAA-------------T
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196031718  7 + 196197964 T-GGAAA-------------T
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11441824  7 +  11645122 T-GGAAA-------------T
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   1747  7 -     46448 T-GGAAA-------------T
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                1577  7 -      3617 T-GGAAA-------------T
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 11910  7 -     55006 T-GGAAA-------------T
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43836947  7 +  43892939 T-GGAAA-------------T
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                4170  7 -      5978 T-GGAAA-------------T
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               1752  7 -     27140 T-GGAAA-------------T
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43433613  7 -  43563597 T-GGAAA-------------T
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4446439  7 -   4543643 T-GGAAA-------------T
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            143251  7 +    252755 T-TGAAA-------------A
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             33316  7 +     58827 T-TGAAA-------------A
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36870543  7 +  64221397 C-TAAAA-------------A
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       61530  7 -    234502 T-TGAAA-------------T
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_1828            225889  7 -    226874 T-TGAAA-------------T
i Mellivora_capensis.MelCap_flattened_line_1828         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233                8456  7 +     15977 C-TGAAA-------------A
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1043266  7 -  26018355 T-TGAAA-------------A
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_183284                    884  7 +      2166 T-TAAAA-------------T
i Mesoplodon_bidens.MesBid_scaffold_183284              C 0 C 0
s Microcebus_murinus.CM007691.1                          16506969  7 +  47401472 T-TGAAA-------------T
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  28290  7 -     48017 T-TTAAA-------------T
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               19925  7 -     32043 A-TGGAA-------------C
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22816150  7 -  98408828 C-AGAAA-------------A
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8206647  7 +  10048721 G-TGAAA-------------T
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            31328  7 +     45743 G-TGAAA-------------T
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        32285  7 +     34273 T-GGAAA-------------T
i Miopithecus_ogouensis.k141_2666161                    C 0 I 7
s Mirounga_angustirostris.MirAng_flattened_line_8852         7931  7 -    104932 C-TGAAA-------------T
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     2382  7 +      8497 T-TGAAA-------------T
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 143611  7 +    154973 T-TAAAA-------------T
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                158464  7 +    265003 a-tggaa-------------c
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 1855  7 -      4346 T-TAAAA-------------T
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  141555  7 -    168139 T-TGAAA-------------T
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          16466  7 -    100666 A-TGGAA-------------T
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70761998  7 +  92629107 C-TAAAA-------------A
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75485120  7 +  98207768 C-TAGAA-------------A
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67549438  7 +  89017189 C-TAAAA-------------A
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74324540  7 +  97876770 C-TAGAA-------------A
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              7995  7 +     98495 C-TGAAA-------------T
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4420784  7 -  28371801 T-TGAAA-------------T
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     86955  7 -    117718 C-TAAAA-------------T
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               964793  7 +   8389877 A-TGGAA-------------T
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5016470  7 +   6462685 A-TGGAA-------------T
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3462379  7 -   3747815 A-TGGAA-------------T
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         7576  7 +     66751 A-TGGAA-------------T
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 I 9
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             2323  6 -      8794 T--GAAA-------------T
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nasalis_larvatus.k141_153429                               4649  7 +     48152 T-GGAAA-------------T
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4481532  7 -  14209539 C-TGAAA-------------T
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3948220  7 -   4490290 T-TAAAA-------------T
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  46580  7 +     94413 A-TGGAA-------------C
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1223136                          10416  7 -     11253 T-TGAAA-------------T
i Nomascus_annamensis.k141_1223136                      C 0 C 0
s Nomascus_concolor.k141_468488                              1059  7 -      1482 T-TGAAA-------------T
i Nomascus_concolor.k141_468488                         I 1 C 0
s Nomascus_gabriellae.k141_906566                            1048  7 -      2544 T-TGAAA-------------T
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             21522  7 -  18771707 T-TGAAA-------------T
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_844529                                   796  7 +      2124 T-TGAAA-------------T
i Nomascus_siki_a.k141_844529                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                26981  7 +   3668941 T-TGAAA-------------T
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65563823  7 -  95554990 T-TGAAA-------------T
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                             668  7 +      6470 T-TGAAA-------------T
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65666192  7 +  89412551 T-TGAAA-------------T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4992510  7 -  23139505 T-TGAAA-------------T
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3676858  7 +  10294119 c-taaaa-------------t
i Octodon_degus.JH651621.1                              C 0 I 6
s Odobenus_rosmarus.KB229369.1                             676190  7 -   3126709 T-TGAAA-------------G
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1076978  7 +   1425656 T-TAAAA-------------T
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         34142  7 +     78940 T-TAAAA-------------T
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  121482  7 +    145789 C-AGAAA-------------A
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  33425  7 +     62360 C-TGAAA-------------A
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7221904  7 -   7562323 T-TAAAA-------------T
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              40366  7 -     66828 T-CTAAA-------------T
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 I 8
s Oryctolagus_cuniculus.CM000803.1                      141872495  7 + 163896628 T-TGAAA-------------T
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      304316  7 -    505867 T-TGAAA-------------T
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       35834  7 +     38679 T-TGAAG-------------T
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18005275  7 -  38779656 T-TGAAG-------------T
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134074558  7 - 275406953 T-TAAAA-------------T
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      75772  7 +    140051 T-TAAAA-------------T
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127571280  7 - 205426864 T-TGAAA-------------T
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120148427  7 - 196562556 T-TGAAA-------------T
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  30777  7 +    295523 T-TGAAA-------------T
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3634381  7 +  18214204 t-tgaaa-------------t
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5024158  7 -   6340057 t-tgaaa-------------t
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1063416  7 -   1292953 T-TAAAA-------------T
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188152397  7 - 188283584 T-GGAAA-------------T
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            48609  7 +     76494 T-GGAAA-------------T
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47509794  7 +  47705337 T-GGAAA-------------T
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 63776  7 -    104429 T-GGAAA-------------T
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  13562  7 -     29451 T-GGAAA-------------T
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                33965  7 +     35859 T-GGAAA-------------T
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    112111  7 -    135482 T-TGAAA-------------T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      39795  7 -     45160 C-TACAA-------------T
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4946599  7 -   8017169 C-TGAAA-------------A
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            118521  7 -    122454 T-TAAAA-------------T
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           1650  7 -      3310 T-GGAAA-------------T
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       21556  7 -     82327 T-GGAAA-------------T
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           18308  7 +     19957 T-GGAAA-------------T
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26736317  7 +  26888534 T-GGAAA-------------T
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            93566  7 +    112873 A-TGGAA-------------T
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             40302  7 -     61926 T-TGAAA-------------T
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        21731  7 +     78826 T-TGAAA-------------T
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              5682  7 -     15800 T-TGAAA-------------T
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                         8880  7 -     16101 T-TGAAA-------------T
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          2189  7 +      9673 T-TGAAA-------------T
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13471183  7 -  19735023 T-TGAAA-------------T
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           10091  7 -     31692 T-TGAAA-------------T
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           2588  7 +     21690 T-TAAAA-------------T
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       19490  7 +     44506 T-TGAAA-------------T
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        19708  7 +     67491 T-TGAAA-------------T
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                       9953  7 -     98129 T-TGAAA-------------T
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     19554  7 +    147771 T-TGAAA-------------T
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        19804  7 -     23762 T-TGAAA-------------T
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                           270  7 -     55515 T-TGAAA-------------T
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         19623  7 +    152463 T-TGAAA-------------T
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      6383  7 +      8943 T-TGAAA-------------T
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                          9343  7 +    134592 T-TGAAA-------------T
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          19933  7 -     75465 T-TGAAA-------------T
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              183834  7 -    373494 T-TGAAA-------------T
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19803738  7 +  19899266 T-TGAAA-------------T
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               1887  7 -     15069 T-GGAAA-------------T
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              2021  7 +     14865 T-GGAAA-------------T
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                73211  7 +     78963 T-CTAAA-------------T
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6845226  7 +  12164890 T-TGAAA-------------T
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     13696  5 -     30946 ---gaaa-------------t
i Propithecus_coquerelli.NW_012147863.1                 I 34 C 0
s Propithecus_coronatus.k141_1353159                          379  5 +     11805 ---GAAA-------------T
i Propithecus_coronatus.k141_1353159                    I 11 C 0
s Propithecus_diadema.k141_577245                           39710  5 +     52369 ---GAAA-------------T
i Propithecus_diadema.k141_577245                       I 11 C 0
s Propithecus_edwardsi.k141_1317105                         32098  5 -     44753 ---GAAA-------------T
i Propithecus_edwardsi.k141_1317105                     I 11 C 0
s Propithecus_perrieri.k141_7554                            14020  5 +     27322 ---GAAA-------------T
i Propithecus_perrieri.k141_7554                        I 11 C 0
s Propithecus_tattersalli.k141_907138                       13662  5 -     53241 ---GAAA-------------T
i Propithecus_tattersalli.k141_907138                   I 11 C 0
s Propithecus_verreauxi.k141_158021                         35934  5 -     48185 ---GAAA-------------T
i Propithecus_verreauxi.k141_158021                     I 11 C 0
s Psammomys_obesus.NESX01026517.1                           29990  7 +     77221 C-TGAAA-------------A
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            1128  7 -     27784 A-TGGAA-------------C
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        242656  7 -    344369 T-TGAAA-------------T
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13243252  7 -  17261082 T-TGAAA-------------T
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             601206  7 -   3946241 T-TGAAA-------------T
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131530972  7 - 161321710 t-tgaaa-------------t
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             26011  7 +     56732 T-GGAAA-------------T
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6802501  7 +   6970761 T-GGAAA-------------T
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             1893  7 +     18040 T-GGAAA-------------T
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                13064  7 +     68503 T-TAAAA-------------T
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13911363  7 +  90463843 C-TAAAA-------------T
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1784857  7 +   2252614 T-TGAAA-------------T
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           12449  7 -     14454 T-GGAAA-------------T
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206373775  7 - 206558726 T-GGAAA-------------T
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44851423  7 -  45163003 T-GGAAA-------------T
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                16555  7 +    109198 T-TGAAA-------------T
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       4844  7 +     12214 T-TAAAA-------------T
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15669391  7 -  43202129 t-tgaaa-------------t
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        1257  7 +     34089 T-TGAAA-------------T
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              1200  7 -     60842 T-TGAAA-------------T
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              1277  7 +     67014 T-TGAAA-------------T
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              1273  7 +     60816 T-TGAAA-------------T
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 1210  7 -     76454 T-TGAAA-------------T
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17337733  7 -  30362882 T-TGAAA-------------T
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         17333  7 -     62485 T-TGAAA-------------T
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   28609  7 -    114521 T-TGAAA-------------T
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1527475                       24436  7 +     26421 T-GGAAA-------------T
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       4897  7 +     20762 T-GGAAA-------------T
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         38631  7 +     40653 T-GGAAA-------------T
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                            9189  7 -     12194 T-GGAAA-------------T
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     22609  7 -     27512 T-GGAAA-------------T
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         31630  7 -     33692 T-GGAAA-------------T
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   94660  7 -    120886 C-AGAGA-------------A
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            14852  7 +    739146 T-TGAAA-------------T
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17747508  7 -  27805282 t-ttaaa-------------t
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2236620  7 +   2842873 C-TAAAA-------------A
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             231653  7 -    276980 T-TGAAA-------------T
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            24222  7 +     62062 T-TGAAA-------------T
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189269148  6 + 218635234 t-ta-aa-------------t
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                     13898581  7 +  13920577 T-TGAAA-------------T
i Symphalangus_syndactylus.tarseq_24                    C 0 I 34
s Tadarida_brasiliensis.TadBra_scaffold_145589               3061  7 -      6213 A-TGAAA-------------T
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               11996  6 +     45698 T--GAAA-------------T
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      804004  7 +   1148477 T-TGAAA-------------T
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  54664  7 +     99546 T-TGAAA-------------T
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194003933  7 - 194193292 T-GGAAA-------------T
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                   849  6 +      6782 T--GAGA-------------T
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  133135  7 -    259118 A-TGAAA-------------C
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        23007  7 +     38948 T-GGAAA-------------T
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   16734  7 -     32910 T-GGAAA-------------T
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       22632  7 +     24652 T-GGAAA-------------T
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      1517  6 -      3559 T-GGAAA--------------
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           39456  7 -     54611 T-GGAAA-------------T
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       15455  7 +     17312 T-GGAAA-------------T
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    22825  6 -     25040 T-GGAAA--------------
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          1491  6 +      3528 T-GGAAA--------------
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  47853  6 +     51589 T-GGAAA--------------
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       11021  7 +     14732 T-GGAAA-------------T
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       1499  7 -     28054 T-GGAAA-------------T
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44656294  7 -  44834318 T-GGAAA-------------T
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        1304  7 +      3372 T-GGAAA-------------T
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   2484  7 +     90398 T-TAAAA-------------T
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16078592  3 +  31416278 T-----A-------------T
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2788434  7 -   3938065 a-taaaa-------------t
i Tupaia_chinensis.KB320831.1                           C 0 I 7
s Tupaia_tana.TupTan_flattened_line_68454                     995  7 +     13056 A-CAAAA-------------T
i Tupaia_tana.TupTan_flattened_line_68454               C 0 I 7
s Tursiops_truncatus.MRVK01000923.1                      69310622  7 -  96451834 T-TAAAA-------------T
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 23806  7 -     25548 C-TGAAA-------------T
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6511240  7 +  28682327 T-TGAAA-------------T
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  2165  7 -     20643 T-TGAAA-------------T
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             21710  7 -     33872 T-CGAAA-------------T
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1521938  8 -   2331223 TTTAAAA-------------T
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                134386  7 -    281493 T-TGAAA-------------T
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       123713  7 -    134049 C-TTAAA-------------A
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        210919  7 -    227762 T-TGAAA-------------T
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           4125  7 -      8775 T-TAAAA-------------T
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16291  1 -    119109 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     12283  2 -     20485 I
e Jaculus_jaculus.JH725517.1                              8561873  2 +  11848649 I
e Allactaga_bullata.AllBul_scaffold_70162                    8911  2 -     22067 I
e Tarsius_wallacei.k141_48636                               56662  0 +     65473 C
e Tarsius_lariang.k141_609102                               23348  0 +     42269 C
e Perodicticus_potto.k141_713187                            21218  0 -     27972 C
e Perodicticus_ibeanus.k141_117958                           1921  0 -     23713 C
e Nannospalax_galili.KL201303.1                            107449  0 +    362372 C
e Dolichotis_patagonum.DolPat_scaffold_14102                33375  0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             56104 16 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                14631 16 +     26546 I
e Cephalopachus_bancanus.k141_702587                         4903  0 +     21754 C
e Cavia_tschudii.CavTsc_scaffold_488                       173989  0 +    436027 C
e Cavia_porcellus.DS562889.1                             15795798  0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15783848 16 -  24422027 I
e Carlito_syrichta.NW_007248099.1                          305857  0 +    345090 C

a score=0.000000
s hg38.chr4_GL000008v2_random                                8552 34 +    209709 GTCAT-------GCT-----G-GTCATAT----------------ATG----TTACAGCAATG-AG---GA
s Acinonyx_jubatus.LLWD01000356.1                         2030639 34 +   3721120 gCCAG-------GCT-----A-GTCATAT----------------ATT----GGATAGCAATG-AG---GA
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    108918 34 -    189883 TATAT-------GTT-----T-GTTCTGT----------------ATC----TGATCACAATT-AG---TA
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10653972 34 +  23371972 GCCAG-------GCT-----A-GTCACAT----------------ATT----GGATAGGAATG-AG---GA
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7090676 34 -  16596857 GCCAG-------GCT-----A-GTCACCT----------------ATT----GGATAGCAATA-AG---GA
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allenopithecus_nigroviridis.k141_3103707                  59576 32 +     61638 GTCGT-------GCT-----G-GTCATAT------------------T----TGATAGCAATG-AG---GA
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        51384 32 +     53391 GTCGT-------GCT-----G-GTCATAT------------------T----TGATAGCAATG-AG---GA
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         2108 32 +     72529 GTCAT-------GCT-----G-GTCATAT------------------T----TGATAGCAATG-AG---GA
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          1684 32 +      3797 GTCGT-------GCT-----G-GTCATAT------------------T----TGATAGCAATG-AG---GA
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             6864 32 -     18050 --CAT-------GCT-----G-GTCATAT----------------ATC----TGATAGCAATG-AG---GA
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  7977 34 -     11521 aACAT-------GCT-----G-GTCATAT----------------ATC----TGATAGCAATG-AG---GA
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              7539 34 -     21359 AACAT-------GCT-----G-GTCATAT----------------ATC----TGATAGCAATG-AG---GA
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1856473                                5920 34 +      7227 AACAT-------GCT-----G-GTCATAT----------------ATC----TGATAGCAATG-AG---GA
i Alouatta_juara.k141_1856473                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          6834 34 -     10438 AACAT-------GCT-----G-GTCATAT----------------ATC----TGATAGCAATG-AG---GA
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            3489 34 +      7047 AACAT-------GCT-----G-GTCATAT----------------ATC----TGATAGCAATG-AG---GA
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             6776 34 +     10410 AACAT-------GCT-----G-GTCATAT----------------ATC----TGATAGCAATG-AG---GA
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                             574 34 -      4927 aACAT-------GCT-----G-GTCATAT----------------ATC----TGATAGCAATG-AG---GA
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             3507 34 +      6429 AACAT-------GCT-----G-GTCATAT----------------ATC----TGATAGCAATG-AG---GA
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3517394 35 +   4113121 GCCAT-------GCT-----AAGTCTTCT----------------ATC----TGATGACAGTG-AT---AC
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      387594 29 -    631301 ATTGT-------CCA-----A-----TAT----------------ATT----TGACAGC-ATG-AG---GA
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            28027 35 +     33004 GCCAT-------GCT-----AAGTCTTCT----------------ATC----TGATGACAGCG-AT---AC
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 59221 34 +     78111 ATCAT-------GCT-----G-ATCATAT----------------ATC----TGATAGCAATG-AG---GA
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            2151 34 +     22701 ATCAT-------GCT-----G-ATCATAT----------------ATC----TGATAGCAATG-AG---GA
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5746109 34 +   9889416 atcat-------gCT-----G-ATCATAT----------------ATC----TGATAGCAATG-AG---GA
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             2690 34 -    104377 ATCAT-------GCT-----G-ATCATAT----------------ATC----TGATAGCAATG-AG---GA
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               2699 34 +     23246 ATCAT-------GCT-----G-ATCATAT----------------ATC----TGATAGCAATG-AG---GA
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                      587 23 +      5067 ----------------------ATCAT------------------ATC----TGATAGTAATG-GG---AT
i Aplodontia_rufa.AprRuf_scaffold_156013                I 6 C 0
s Arctocebus_calabarensis.k141_1161114                      14715 33 +     17483 GCCAT-------GCT-----A-GCCATTT----------------ATC----TGATAG-AGTG-AG---GA
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 5695 33 -     29036 ATTGT-------CCA-----A-TTCATAT----------------ATT----TGATAGC-ATG-AG---GA
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9535963 34 +  39197703 ATCAT-------GCT-----G-GTCATGT----------------ATC----TGATAGCAATG-AG---GA
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             57247 34 +     85812 ATCAT-------GCT-----G-GTCATAT----------------ATC----TGATAGCAATG-AG---GA
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 8246 34 +     89302 ATCAT-------GCT-----G-GTCATAT----------------ATC----TGATAGCAATG-AG---GA
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             12756 34 -     58268 ATCAT-------GCT-----G-GTCATGT----------------ATC----TGATAGCAATG-AG---GA
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             60742 34 +    119057 ATCAT-------GCT-----G-GTCATAT----------------ATC----TGATAGCAATG-AG---GA
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               2693 34 -     25888 ATCAT-------GCT-----G-GTCATAT----------------ATC----TGATAGCAATG-AG---GA
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 3455 34 -     16375 GCCAT-------ACT-----A-GTCATAT----------------ATC----TGACAGCAATG-AG---GA
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_767228                               9404 34 -      9688 GCCAT-------ACT-----A-GTCATAT----------------ATC----TGACAGCAATG-AG---GA
i Avahi_peyrierasi.k141_767228                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26377347 35 +  51448160 GCCAT-------GCT-----AAGTCTTCT----------------ATT----TGGTAACAATG-AT---AA
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        2578 35 -     13118 GCCAT-------GCT-----AAGTCTTCT----------------ATT----TGGTAACAATG-AT---AA
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   40494 35 -     72089 GCCAT-------GCT-----AAGTCTTCT----------------ATC----TGAACACAGTG-AT---AC
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6556646 27 +   6870073 --------------------AAGTCTTCT----------------ATC----TGATGACAGTA-AT---AC
i Bison_bison.KN264915.1                                I 5 C 0
s Bos_indicus.CM003021.1                                138136872 35 - 161108492 GCCAT-------GCT-----AAGTCTTCT----------------ATC----TGATGACAGTA-AT---AC
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     569250 35 -    998990 GCCAT-------GCT-----AAGTCTTCT----------------ATC----TGATGACAGTA-AT---AC
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136292605 35 - 158972876 GCCAT-------GCT-----AAGTCTTCT----------------ATC----TGATGACAGTA-AT---AC
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1228226 35 -   1914593 GCCAT-------GCT-----AAGTCTTCT----------------ATC----TGATGACAGTG-AT---AC
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               110596 34 -    171031 ATCAT-------GCT-----G-GTCATAT----------------ATC----TGATAGCAATG-GG---GA
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                  9622 34 +    125063 ATCAT-------GCT-----G-GTCATAT----------------ATC----TGATAGCAATG-GG---GA
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                11670 34 -    216513 ATCAT-------GCT-----G-GTCATAT----------------ATC----TGATAGCAATG-GG---GA
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        4210 34 -    134917 ATCAT-------GCT-----G-GTCATAT----------------ATC----TGATAGCAATG-GG---GA
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3216865 31 -   8989139 GCCAT-------GCC-----A-CT---CC----------------ATT----TAACAGCAATT-AG---AA
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           394566 31 -  15254737 GCCAT-------GCC-----A-TT---CC----------------ATT----TAACAGCAATT-AG---AA
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2970303 31 +   6889770 GCCAT-------GCC-----A-CT---CC----------------ATT----TAACAGCAATT-AG---AA
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11515349 34 +  39901454 GCCAG-------GCT-----A-GTCATAT----------------ATT----GGATAGCAATG-AG---GA
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   10366 34 +     87036 GCCAG-------GCT-----A-GTCATAT----------------ATT----GGATAGCAATG-AG---GA
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11262008 34 -  35597290 GCCAG-------GCT-----A-GTCATAT----------------ATT----GGATAGCAATG-AG---GA
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11084537 34 +  39895921 GCCAG-------GCT-----A-GTCATAT----------------ATT----GGATAGCAATG-AG---GA
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16451571 34 -  44759192 GCCAG-------GCT-----A-GTCATAT----------------ATT----GGATAGCAATG-AG---GA
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21322501 35 + 157394656 GCCAT-------GCT-----AAGTCTTCT----------------ATC----TGATGACAGTG-AT---AC
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135703728 35 - 157403528 GCCAT-------GCT-----AAGTCTTCT----------------ATC----TGATGACAGTG-AT---AC
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_647363                  1270 34 +      1887 ATCAT-------GCC-----A-ATCGTGT----------------ATC----TGATAGCAATG-GA---AT
i Capromys_pilorides.CapPil_scaffold_647363             C 0 C 0
s Carlito_syrichta.NW_007248099.1                          305857 28 +    345090 -------------CT-----A-GTCATAT----------------ATT----TTATAGCAACA-AG---CA
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               56771 33 +     67245 ATTGT-------CCG-----A-TTCATAT----------------ATT----TGATAGC-GTG-AA---GA
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   27284 24 +     33760 GCCAT-------GCT-----A-GGAAT-------------------T-----------CTATG-AG---GA
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   156085 30 -    276539 GCACT-------GCT-----A-TTCTTCT----------------ACT----TGATAGCAATT--------
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18887436 34 -  29618158 ATCAT-------GCT-----G-GTCATAT----------------ATC----TGACAGCAATG-AG---GA
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 4980 34 -     26817 ATCAT-------GCT-----G-GTCATAT----------------ATC----TGACAGCAATG-AG---GA
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                 9223 34 +     25043 ATCAT-------GCT-----G-GTCATAT----------------ATC----TGACAGCAATG-AG---GA
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         4903 28 +     21754 -------------CT-----A-GTTATAT----------------ATT----TTATAGCAACA-AA---CA
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4360558 34 +   7569818 GCCAT-------GCT-----A-GTCACAC----------------ATT----TGATAGCAGAG-AG---GA
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623          313 34 -      9338 GCCAT-------GCT-----A-GTCACAC----------------ATT----TGATAGCAGAG-AG---GA
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6551372 32 +   6739814 GTCGT-------GCT-----G-GTCATAT------------------T----TGATAGCAATG-AG---GA
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      52849 32 -     54931 GTCGT-------GCT-----G-GTCATAT------------------T----TGATAGCAATG-AG---GA
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         17833 32 -     19697 GTCGT-------GCT-----G-GTCATAT------------------T----TGATAGCAATG-AG---GA
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         55364 32 -    107033 GTCGT-------GCT-----G-GTCATAT------------------T----TGATAGCAATG-AG---GA
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        1805 32 -      3853 GCCAT-------GCT-----G-GTCATAT------------------T----TGATAGCAATG-AG---GA
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          25738 32 +     30494 GTCAT-------GCT-----G-GTCATAT------------------T----TGATAGCAATG-AG---GA
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           1762 32 -      4022 GTCAT-------GCT-----G-GTCGTAT------------------T----TGATAGCAATG-AG---GA
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          1655 32 -      3505 GTCGT-------GCT-----G-GTCATAT------------------T----TGATAACAATG-AG---GA
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           20459 32 +     35983 GTCAT-------GCT-----G-GTCATAT------------------T----TGATAGCAATG-AG---GA
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11986981 32 +  12117833 GTCAT-------GCT-----G-GTCATAT------------------T----TGATAGCAATG-AG---GA
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46473734 32 +  46592721 GTCAT-------GCT-----G-GTCATAT------------------T----TGATAGCAATG-AG---GA
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      31561 32 +     33420 GTCGT-------GCT-----G-GTCATAT------------------T----TGATAGCAATG-AG---GA
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        1597 32 -      3443 GTCAT-------GCT-----G-GTCATAT------------------T----TGATAGCAATG-AG---GA
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      2588 32 -      4669 GTCAT-------GCT-----G-GTCATAT------------------T----TGATAGCAATG-AG---GA
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        2388 32 -      4411 GTCAT-------GCT-----G-GTCATAT------------------T----TGATAGCAATG-AG---GA
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         1913 32 -      4205 GTCAT-------GCT-----G-GTCGTAT------------------T----TGATAGCAATG-AG---GA
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_1070855           129 34 -      1715 ACCAT-------GCT-----A-GTTATTT----------------ATG----TGGTAGAAATG-AG---GA
i Chaetophractus_vellerosus.ChaVel_scaffold_1070855     C 0 C 0
s Cheirogaleus_major.k141_1157592                           55760 34 -     68416 GCCAT-------GCT-----A-GTCATAT----------------ATC----TGTTAGCAATG-AG---AA
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            4809 34 +     13308 GCCAT-------GCT-----A-GTCATAT----------------ATC----TGATAGCAATG-AG---AA
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             2239 34 -     18223 ATCAT-------GCT-----G-GTCATAC----------------ATC----TGATAGCAATG-GG---GA
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             19262 34 +     25473 ATCAT-------GCT-----G-GTCATAC----------------ATC----TGATAGCAATG-GG---GA
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           38301 34 +     57117 ATCAT-------GCT-----G-GTCATAC----------------ATC----TGATAGCAATG-GG---GA
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          42976 34 +     54541 ATCAT-------GCT-----G-GTCATAC----------------ATC----TGATAGCAATG-GG---GA
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15958642 34 +  43084221 ATCAT-------GCT-----A-GTCATGT----------------ATC----TGACAACAATG-GG---AT
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         67817 34 +    196370 ATCAT-------GCT-----G-GTCATAT----------------ATC----TGATAGCAATG-GG---GA
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          11998 34 +     40510 ATCAT-------GCT-----G-GTCATAT----------------ATC----TGATAGCAATG-GG---GA
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15135194 32 -  15256731 GTCGT-------GCT-----G-GTCATAT------------------T----TGATAGCAATG-AG---GA
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      30240 32 -     53260 GTCGT-------GCT-----G-GTCATAT------------------T----TGATAGCAATG-AG---GA
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101140689 32 + 101219884 GTCGT-------GCT-----G-GTCATAT------------------T----TGATAGCAATG-AG---GA
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                13752 34 -     21363 GCCAT-------GTT-----A-GTGATAT----------------ATC----TGGTAGCCATG-AG---GA
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           759058 34 +    964067 GCCAT-------GTT-----A-GTGATAT----------------ATC----TGGTAGCCATG-AG---GA
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_141308              5847 34 -     12508 tcctt-------aCT-----A-GTGATCT----------------ATC----TGAGAGCACTG-AG---GA
i Chrysochloris_asiatica.ChrAsi_scaffold_141308         C 0 C 0
s Colobus_angolensis.KN985967.1                          10879268 32 +  10971483 GTCGT-------GCT-----G-GTCACAT------------------T----TGACAGCAATG-AG---GA
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147660426 32 + 156195979 GTCGT-------GCT-----G-GTCACAT------------------T----TGACAGCAATG-AG---GA
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            12412 32 +     23629 GTCGT-------GCT-----G-GTCACAT------------------T----TGACAGCAATG-AG---GA
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60610021 34 +  78930452 GCCAT-------GCT-----A-TTCATCT----------------ATT----TGATAATAATG-AA---GA
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         36480 33 -     40477 GCCAG-------GCT-----A-GTCAGAT----------------ATT----TGATGGC-ATG-AT---GA
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 274361 34 -    399297 GCTAT-------ACT-----T-GGTGCAT----------------ATT----TGGTCAGAATT-AG---TA
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53025542 34 +  72327488 GCCAC-------GAT-----T-GCTGTAC----------------AGC----TGATCGCAACT-AG---TA
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             16006 33 -     19186 ATAA--------ATT-----A-GTCCTAT----------------ATT----TCATTGTAGTA-AC---AA
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            48667 34 -     70449 GCCAG-------GGT-----A-GTCATAT----------------ATT----GGATAGCAATG-AG---GA
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  205087 24 -    956709 -----------------------ACATGT----------------ATG----TGATAGAAATG-GG---AT
i Ctenodactylus_gundi.CteGun_scaffold_447               I 6 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 27338 34 -     67205 ATCAT-------GCC-----A-GTCATGT----------------GTC----TGATAGCAATA-GA---AT
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          178940 34 -   6883506 ACCAT-------GCT-----A-GTGATAT----------------ATC----TGGCAGCAATG-AG---GA
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16841631 34 +  31942871 GCCAT-------GCT-----A-GTCATAT----------------ATC----TGATAGCAATG-AG---GA
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80034093 35 -  96802777 GCCAT-------GCT-----AAGTCTTCT----------------ATA----TGATAACAATG-AT---AA
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18696086 31 -  18957592 ACTGT-------CCA-----A-GTCAT------------------ATT----CAATGGC-ATG-AG---GA
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 319220 34 +    993696 GCCAT-------GCT-----A-GTCACAT----------------ATT----TGATAGCAGAG-AG---CA
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_170113                  478 34 +       818 GCCAT-------GCT-----A-GTCACAC----------------ATT----TGATAGCAGAG-AG---GA
i Diceros_bicornis.DicBicMic_scaffold_170113            C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   154511 34 +    228994 ATCAT-------GCT-----A-GTCATGT----------------ATC----TGACAGCAATG-GA---AT
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3652259 34 +   4240102 TTCAT-------ACT-----A-GTCATAT----------------TTC----TGATAGCAATG-AA---AA
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 23813 34 +     28912 TTCAT-------ACT-----A-GTCATAT----------------TTC----TGATAGCAATG-AA---AA
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Echinops_telfairi.JH980316.1                           22991351 34 -  44670279 GCCAT-------TCT-----A-GTGATAG----------------ATC----TGATAGCATTG-AG---GA
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                  9463 33 +     24177 GCCAT-------GCT-----A-GTCATAT----------------ATT----TGATAGC-ATG-AG---ga
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1488762 35 +   1727528 GCCAT-------GTT-----AAGTCTTCT----------------ATC----TGATGACAGTG-AT---AC
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7803518 34 +  15467074 GTCAC-------ATT-----A-GTGATAT----------------ATG----TGACAGTGATG-AG---AA
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        236010 34 -    369425 GCCAT-------GCT-----T-GCTGTAT----------------ATC----TAACCACAGTT-GG---TC
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           3017 34 -      7838 GCCAT-------GCT-----T-GCTGTAT----------------ATC----TGATCACAGTT-GG---TC
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85868398 34 +  99434291 GCCAG-------GCT-----A-GTCACAT----------------ACT----GGATAGCATAG-AG---GA
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Equus_asinus.JREZ01000062.1                             5849949 34 -   7175178 GCCAT-------GCT-----A-GTCACAT----------------ATT----CGAGAACAAAG-AG---GA
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13348452 34 +  41866177 GCCAT-------GCT-----A-GTCACAT----------------ATT----CGAGAACAAAG-AG---GA
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                           9942 34 +     92910 GCCAT-------GCT-----A-GTCACAT----------------ATT----CGAGAACAAAG-AG---GA
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11529538 34 +  16010500 GTCAT-------GTC-----C-ATCAAAT----------------AGT----TGACAGCAGTG-AG---GG
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48767373 32 -  48907691 GTCGT-------GCT-----G-GTCATAT------------------T----TGATAGCAATG-AG---GA
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          312231 35 +    330699 GCCAT-------GCT-----AAGTCTTCT----------------ATT----TGGTAACAATG-AT---AA
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             58660 35 +     89355 GCCAT-------GCT-----AAGTCTTCT----------------ATT----TGGTAACAATG-AT---AA
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              1832 34 +     13586 GCAGT-------GCT-----A-GTCATAA----------------ATC----TGGTAGCAATG-AG---GA
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               1768 34 -      6809 GCAGT-------GCT-----A-GTCATAT----------------ATC----TGGTAGCAATG-AG---GA
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             8240 34 +     36558 GCAGT-------GCT-----A-GTCATAT----------------ATC----TGGTAGCAATG-AG---GA
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             4556 34 +     60246 TCAGT-------GCT-----A-GTCATAT----------------ATC----TGGTAGCAATG-AG---GA
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 8044 34 +    109717 GCAGT-------GCT-----A-GTCATAT----------------ATC----TGGTAGCAATG-AG---GA
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               12418 34 +     16540 GCAGT-------GCT-----A-GTCATAT----------------ATC----TGGTAGCAATG-AG---GA
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                12695 34 +     27497 GCAGT-------GCT-----A-GTCATAT----------------ATC----TGGTAGCAATG-AG---GA
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           15156 34 +     26808 GCAGT-------GCT-----A-GTCATAT----------------ATC----TGGTAGCAATG-AG---GA
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                29884 34 +     46535 GCAGT-------GCT-----A-GTCATAT----------------ATC----TGGTAGCAATG-AG---GA
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              12607 34 -     29447 GCAGT-------GCT-----A-GTCATAT----------------ATC----TGGTAGCAATG-AG---GA
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129889619 34 - 159252932 gCCAG-------GCT-----A-GTCATAT----------------ATT----GGATAGCAATG-AG---GA
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129276693 34 - 158578461 gCCAG-------GCT-----A-GTCATAT----------------ATT----GGATAGCAATG-AG---GA
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 17828 34 +     52776 GCCAG-------GCT-----A-GTCATAT----------------ATT----GGATAGCAATG-AG---GA
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13889831 21 -  19261668 --------------------------TGT----------------ATC----TGATAGCAAAG-gg---at
i Fukomys_damarensis.KN123630.1                         I 6 C 0
s Galago_moholi.ctg555                                     207773 29 -    847004 GCCCT-------GCT-----A-GCCCTTT----------------ATC----TG-----AGTG-AG---GA
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           10153 29 -     43889 GCCCT-------GCT-----A-GCCCTTT----------------ATC----TG-----AGTG-AG---GA
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           7205 29 +     27357 GCCAT-------GCT-----A-GCCACTT----------------ATC----TG-----AGTA-AG---GA
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               153084 34 +    324696 GTCAT-------GCT-----A-GTCATAT----------------ATC----TAATAGCAATG-AG---GA
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    178277 35 -    189561 GCCAT-------GCT-----AAGTCTTCT----------------ATC----TGATGACAGTG-AT---AC
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                            9489 34 -     18683 GCCAT-------CTT-----A-GTCATAT----------------ATC----TGATAGCAAAG-AG---CT
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               1947 34 -     14630 GTCAT-------GCT-----G-GTCATAT----------------ATT----TGATAGCAATG-AG---GA
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119649045 34 - 195582420 GTCAT-------GCT-----G-GTCATAT----------------ATT----TGATAGCAATG-AG---GA
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   74043 34 +    118900 GCCAT-------GTT-----A-GTCATAT----------------ATC----TGATAGCAATG-AA---CT
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                         2373 34 +      3980 ACCAT-------GCT-----A-GTCATAT----------------GTC----TGGTAGCAATG-AG---GA
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             24853 34 +     26611 ACCAT-------GCT-----A-GTCATAT----------------GTC----TGGTAGCAATG-AG---GA
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             2307 34 +     56096 ACCAT-------GCT-----A-GTCATAT----------------GTC----TGGTAGCAATG-AG---GA
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        25580 34 -     42470 ACCAT-------GCT-----A-GTCATAT----------------GTC----TGGTAGCAATG-AG---GA
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        42177 34 -     54384 ACCAT-------GCT-----A-GTCATAT----------------GTC----TGGTAGCAATG-AG---GA
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              13872 34 +     53719 GCCAG-------GGT-----A-GTCATAT----------------ATT----GGATAGCAATG-AG---AA
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                24763 35 -     91191 GCCAT-------GCT-----AAGTCTTCT----------------GTC----TGATGACAGTG-AT---AC
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2547972 21 +  31725842 --------------------------TGT----------------ATC----TGATAGCAATG-gg---at
i Heterocephalus_glaber.JH602058.1                      I 13 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               53354 24 +     73687 GCCAC-------CCT-----A-GTCAGAT----------------AG------GACGGC------------
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 I 1
s Hippopotamus_amphibius.HipAmp_scaffold_1308              144347 35 +    277961 GTCAT-------GCT-----AAGCCTTCT----------------ATT----TGATAACAATG-AT---AC
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      275779 33 -    477199 GCCAT-------GCT-----A-GTCATAT----------------ATT----TGATAGC-ATT-AG---GA
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              4934 33 -      9143 GCCAT-------GCT-----A-GTCATAT----------------ATT----TGATAGC-ATC-AG---GA
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg649                                    98617 34 +    115816 GTCAT-------GCT-----G-GTCATAT----------------ATT----TGATAGCAATG-AG---GA
i Hoolock_leuconedys.ctg649                                C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 12941 34 -     67322 GCCAG-------GGT-----A-GTCATAC----------------ATT----AGATAGCAATG-AG---GA
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hylobates_abbotti.k141_493872                              1754 34 +      5897 GTCAT-------GCT-----G-GTCATAT----------------ATT----TGATAGCAATG-AG---GA
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_282275                                968 34 +      1846 GTCAT-------GCT-----G-GTCATAT----------------ATT----TGATAGCAATG-AG---GA
i Hylobates_agilis.k141_282275                          C 0 C 0
s Hylobates_klossii.k141_466549                              8212 34 +     11537 GTCAT-------GCT-----G-GTCATAT----------------ATT----TGATAGCAATG-AG---GA
i Hylobates_klossii.k141_466549                         I 133 I 4
s Hylobates_muelleri.k141_1133650                            1189 34 -      2775 GTCAT-------GCT-----G-CTCATAT----------------ACT----TGATAGCAATG-AG---GA
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             29791 34 -     60944 GTCAT-------GCT-----G-CTCATAT----------------ATT----TGATAGCAATG-AG---GA
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     2913 34 +     22540 ATCAT-------GCT-----A-GTCATGT----------------ATC----TGATAGCAATG-AG---AT
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7122703 32 +  13083262 GCCAT-------GCT-----A-ATTGT------------------ATC----TCATACTAATG-GG---AA
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_3334527                                   8822 34 +      9207 GCCAT-------GCT-----A-GTCATAT----------------ATC----TGATAGCAATC-AG---GA
i Indri_indri.k141_3334527                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               6020 35 +     17520 GCCAT-------GAT-----AAATCTTCT----------------ATA----TGATAACAATG-AT---AC
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               20852 35 +     37189 GCCAT-------GCT-----AAGTCTTCT----------------ATT----TGGTAACAATG-AT---AA
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          46816 34 -    147782 ATCAT-------GCT-----G-GTCATAT----------------ATC----TGATAGCAATG-AG---GA
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   110961 31 -    115756 GCTCT-------GCA-----A-GTC--AT----------------ATT----TGATAGC-ATG-AG---GA
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258403859 34 - 285822530 ACCAT-------GCT-----A-GTCATAT----------------ATC----TGGTAGCAATG-AG---GA
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        20757 34 +     39228 GCCAT-------GCT-----A-GTCATAT----------------ATC----TGATAGCAATG-AG---GA
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            50131 34 +     63517 GCCAT-------GCT-----A-GTCATAT----------------ATC----TGATAGCAATG-AG---GA
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        75353 34 +    116806 GCCAT-------GCT-----A-GTCATAT----------------ATC----TGATAGCAATG-AG---GA
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     28394 34 -     33031 GCCAT-------GCT-----A-GTCATAT----------------ATC----TGATAGCAATG-AG---GA
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3082640 34 -   3498232 GCCAG-------GCT-----A-GTCACAT----------------ATT----GGATAGCAACG-AG---GA
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                     9853 34 +     22452 CCCAT-------GCT-----A-GTTATAG----------------ATA----TGAAAGCAATG-AG---GG
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            133195 35 +   3060487 GCCAG-------GCT-----AAGTCTTCt----------------ata----taataacaatg-at---aa
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19244460 32 +  19376315 GTCGT-------GCT-----G-GTCATAT------------------T----TGATAGCAATG-AG---GA
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            7500 33 +     84689 GCCAT-------GCT-----A-GCCATTT----------------ATC----TGATAG-CATG-AG---GA
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3775251 33 +   6799190 GCCAT-------GCT-----A-GCCATTT----------------ATC----TGATAG-CATG-AG---GA
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20588112 34 -  62548349 GCCAT-------AGT-----A-GTCATGT----------------ATC----TGATGGCACCG-AG---AA
i Loxodonta_africana.GL010040.1                         I 185 C 0
s Lycaon_pictus.CM007556.1                               11083993 34 +  39895028 GCCAG-------GCT-----A-GTCATAT----------------ATT----GGATAGCAATG-AG---GA
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             16143 32 +     74745 GTCGT-------GCT-----G-GTCATAT------------------T----TGATAGCAATG-AG---GA
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12702649 32 +  12821369 GTCGT-------GCT-----G-GTCATAT------------------T----TGATAGCAATG-AG---GA
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               4745 32 +      6569 GTCGT-------GCT-----G-GTCATAT------------------T----TGATAGCAATG-AG---GA
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           43046 32 +     63263 GTCGT-------GCT-----G-GTCATAT------------------T----TGATAGCAATG-AG---GA
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_1068107                               11622 32 +     12679 GTCGT-------GCT-----G-GTCATAT------------------T----TGATAGCAATG-AG---GA
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                1195 32 +      3017 GTCGT-------GCT-----G-GTCATAT------------------T----TGATAGCAATG-AG---GA
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  42807 32 -     79256 GTCGT-------GCT-----G-GTCATAT------------------T----TGATAGCAATG-AG---GA
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196031725 32 + 196197964 GTCGT-------GCT-----G-GTCATAT------------------T----TGATAGCAATG-AG---GA
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11441831 32 +  11645122 GTCGT-------GCT-----G-GTCATAT------------------T----TGATAGCAATG-AG---GA
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   1754 32 -     46448 GTCGT-------GCT-----G-GTCATAT------------------T----TGATAGCAATG-AG---GA
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                1584 32 -      3617 GTCGT-------GCT-----G-GTCATAT------------------T----TGATAGCAATG-AG---GA
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 11917 32 -     55006 GTCAT-------GCT-----G-GTCATAT------------------T----TGATAGCAATG-AG---GA
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43836954 32 +  43892939 GTCGT-------GCT-----G-GTCATAT------------------T----TGATAGCAATG-AG---GA
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                4177 32 -      5978 GTCGT-------GCT-----G-GTCATAT------------------T----TGATAGCAATG-AG---GA
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               1759 32 -     27140 GTCGT-------GCT-----G-GTCATAT------------------T----TGATAGCAATG-AG---GA
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43433620 32 -  43563597 GTCGT-------GCT-----G-GTCATAT------------------T----TGATAGCAATG-AG---GA
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4446446 32 -   4543643 GTCGT-------GCT-----G-GTCATAT------------------T----TGATAGCAATG-AG---GA
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            143258 33 +    252755 GCCAT-------GCT-----A-GTCATAT----------------ATT----TGATAGCAA-G-AA---GA
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             33323 33 +     58827 GCCAT-------GCT-----A-GTCATAT----------------ATT----TGATAGCAA-G-AA---GA
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36870550 32 +  64221397 GCCAT-------GCT-----A-ATTGT------------------ATC----CCATACTAATG-GG---AA
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       61537 33 -    234502 GTCAT-------GGT-----A-ATTGTAG----------------ATT----TAATCTC-ATG-AG---GA
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_1828            225896 34 -    226874 GCCAG-------GCT-----A-GTCACAT----------------ACT----GGATAGCAATG-AG---GA
i Mellivora_capensis.MelCap_flattened_line_1828         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233                8463 37 +     15977 GCCAT-------GCT-----T-GCTATAT----------------GTC----TAATGACAATT-AGTAGTA
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1043273 34 -  26018355 GCCAA-------GCT-----T-GTTGTAT----------------ACC----TTAGCAAAACT-AG---aa
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_183284                    891 35 +      2166 GCCAT-------GCT-----AAGTCTTCT----------------ATT----TGGTAACAATG-AT---AA
i Mesoplodon_bidens.MesBid_scaffold_183284              C 0 C 0
s Microcebus_murinus.CM007691.1                          16506976 34 +  47401472 GCCAT-------GCT-----A-GTCATGT----------------ATC----TGATAGCAATG-Ag---ga
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  28297 34 -     48017 GCCAT-------ACT-----A-GTGATGG----------------ATC----TGATAGCACTG-AG---GA
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               19932 33 -     32043 CTTGT-------CCA-----A-CTCATGT----------------ATT----TGATAAC-ACG-AG---GA
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22816157 34 -  98408828 GCCAT-------GCT-----T-GCTGTAT----------------ATC----TGATCACAGTT-GG---TC
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8206654 33 +  10048721 GCCAC-------CCA-----A-GTCACAT----------------ATT----TGATAGC-ATG-AG---GA
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            31335 33 +     45743 GCCAT-------GCA-----A-GTCACAT----------------ATT----TGATAGC-ATG-AG---GA
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        32299  8 +     34273 -----------------------------------------------------------AATG-AG---GA
i Miopithecus_ogouensis.k141_2666161                    I 7 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         7938 34 -    104932 GCCAG-------GCT-----A-GTCACAT----------------ATT----GGATAGCAACG-AG---GA
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     2389 34 +      8497 GCCAT-------GGT-----A-GTCATGT----------------ATC----TAATAGCAATG-AG---GA
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 143618 35 +    154973 GCCAT-------GAT-----AAGTCTTCT----------------ATA----TGATAACAATG-AT---AA
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                158471 29 +    265003 attgt-------gca-----t-gtcatat----------------att----tgatagc-atg--------
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 I 1
s Moschus_moschiferus.MosMos_scaffold_146101                 1862 35 -      4346 GCCAT-------GCT-----AAGTCTTCT----------------ATC----TGATGACAGTG-AT---AC
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  141562 34 -    168139 GCCAG-------GGT-----A-GTCATAT----------------AGT----GGATAACAATG-AG---AA
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          16473 31 -    100666 GCTAT-------GCA-----A-GTC--AT----------------ATT----TGATAGC-ATG-AG---GA
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70762005 33 +  92629107 GCCAT-------ACT-----T-GCTGGAT----------------ATC----TAATCAT-ATT-AG---TA
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75485127 33 +  98207768 GTCAT-------GCT-----T-GCTGGAT----------------ATC----TAATCAT-ATT-AG---TA
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67549445 33 +  89017189 GTCAT-------GCT-----T-GCTGGAT----------------ATC----TGAATAT-ATT-AG---TA
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74324547 33 +  97876770 GCCAT-------GCT-----T-GCTGGAT----------------ATC----TAATCAT-ATT-AG---TA
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              8002 34 +     98495 GCCAC-------ATT-----A-GTCATAT----------------ATC----TGATGCCAATG-AG---CT
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4420791 34 -  28371801 GCCAG-------GCT-----A-CTCACAT----------------ACT----GGATAGCAATA-AG---GA
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     86962 34 -    117718 ATCAT-------GCC-----A-ATCATGT----------------ATC----TGATAGCAATG-CC---AT
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               964800 31 +   8389877 GCTAT-------GCA-----A-GCC--AT----------------ATT----TGATAGC-ATG-AG---GA
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5016477 31 +   6462685 GCTAT-------GCA-----A-ACC--AT----------------ATT----TGATAGC-ATG-AG---GA
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3462386 31 -   3747815 GCTAT-------GCA-----A-GCC--AT----------------ATT----TGATAGC-ATG-AG---GA
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         7592 14 +     66751 ----------------------------------------------------TGATAGC-ATG-AG---GA
i Myotis_myotis.MyoMyo_scaffold_6123                    I 9 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             2329 34 -      8794 GCCAT-------GCT-----A-GTGATAT----------------ATC----TGGTAGCAATG-AG---TA
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nasalis_larvatus.k141_153429                               4656 32 +     48152 GTCGT-------GCT-----G-GTCACAT------------------T----TGACAGCAATG-AG---GA
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4481539 34 -  14209539 GCCAG-------GCT-----A-GTCACAT----------------ATT----GGATAGCAACG-AG---GA
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3948227 35 -   4490290 GCCAT-------GCT-----AAGTCTTCT----------------ATA----TGATAACAATG-AT---AA
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  46587 31 +     94413 ATTGT-------ACA-----A-GTCATAT----------------ATT----TGGTAGC-TTC-A-----A
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1223136                          10423 34 -     11253 GTCAT-------GCT-----G-GTCATAT----------------ATT----TGATAGCAATG-AG---GA
i Nomascus_annamensis.k141_1223136                      C 0 C 0
s Nomascus_concolor.k141_468488                              1066 34 -      1482 GCCAT-------GCT-----G-GTCATAT----------------ATT----TGATAGCAATG-AG---GA
i Nomascus_concolor.k141_468488                         C 0 C 0
s Nomascus_gabriellae.k141_906566                            1055 34 -      2544 GTCAT-------GCT-----G-GTCATAT----------------ATT----TGATAGCAATG-AG---GA
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             21529 34 -  18771707 GTCAT-------GCT-----G-GTCATAT----------------ATT----TGATAGCAATG-AG---GA
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_844529                                   803 34 +      2124 GCCAT-------GCT-----G-GTCATAT----------------ATT----TGATAGCAATG-AG---GA
i Nomascus_siki_a.k141_844529                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                26988 34 +   3668941 GCCAG-------GCT-----A-GTCATAT----------------ATT----GGATAGCAATG-AG---GA
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65563830 33 -  95554990 GCTAT-------GCT-----A-GCCATTT----------------ATC----TGATAG-CATG-AG---GA
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                             675 33 +      6470 GCTAT-------GCT-----A-GCCATTT----------------ATC----TGATAG-CATG-AG---GA
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65666199 33 +  89412551 GCTAT-------GCT-----A-GCCATTT----------------ATC----TAATAG-CATG-AG---GA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4992517 50 -  23139505 GCCAT-------GCT-----A-GTTAGATGTCATGCTAGTTTGAAATG----TGACAGCAATG-CA---CA
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3676871 13 +  10294119 -------------------------------------------------------taaaaatagga---at
i Octodon_degus.JH651621.1                              I 6 C 0
s Odobenus_rosmarus.KB229369.1                             676197 34 -   3126709 GCCAG-------GCT-----A-GTCACAT----------------ATT----GGATAACAATG-AG---GA
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1076985 35 +   1425656 CCCAT-------GTT-----AAGTCTTCT----------------ATC----TGATGACAGTG-AT---AC
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         34149 35 +     78940 GCCAT-------GCT-----AAGTCTTCT----------------ATC----TGATGACAGTG-AT---AC
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  121489 34 +    145789 GCCAT-------GCT-----T-GCTGTAT----------------ATC----TGATCACAGAT-AG---TC
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  33432 34 +     62360 ACCAT-------GCT-----T-GCTGTAT----------------ATT----TGATCACAATT-AG---CA
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7221911 35 -   7562323 GCCAT-------GCT-----AAGTCTTCT----------------ATA----TGGTAACAATG-AT---AA
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              40381 22 -     66828 -------------------------ATAT----------------ATC----TGATAGCACTG-AA---GA
i Orycteropus_afer.OryAfe_flattened_line_13509          I 8 C 0
s Oryctolagus_cuniculus.CM000803.1                      141872502 34 + 163896628 GCCAT-------GCT-----A-GTTATAG----------------ACG----TGAAAGCAATG-AG---GG
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      304323 34 -    505867 GCCAG-------GCT-----A-GTCATAT----------------ATT----GGATAGCAATG-AG---GA
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       35841 29 +     38679 GCCCT-------GCT-----A-GCCCTTT----------------ATC----TG-----AGTG-AG---GA
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18005282 29 -  38779656 GCCCT-------GCT-----A-GCCCTTT----------------ATC----TG-----AGTG-AG---GA
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134074565 35 - 275406953 GCCAT-------GCT-----AAGTCTTCT----------------GTC----TGATGACAGTG-AT---AC
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      75779 35 +    140051 GCCAT-------GCT-----AAGTCTTCT----------------GTC----TGATGACAGTG-AT---AC
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127571287 34 - 205426864 GTCAT-------GCT-----G-GTCATAT----------------ATT----TGATAGCAAtg-ag---ga
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120148434 34 - 196562556 GTCAT-------GCT-----G-GTCATAT----------------ATT----TGATAGCAAtg-ag---ga
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  30784 34 +    295523 GCCAG-------GCT-----A-GTCATAT----------------ATT----GGATAGCAATG-AG---GA
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3634388 34 +  18214204 gCCAG-------GCT-----A-GTCATAT----------------ATT----GGATAGCAATG-AG---GA
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5024165 34 -   6340057 gCCAG-------GCT-----A-GTCATAT----------------ATT----GGCTAGCAATG-AG---GA
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1063423 35 -   1292953 GCCAT-------GCT-----AAGTCTTCT----------------ATC----TGATGACAGTG-AT---AC
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188152404 32 - 188283584 GCCGT-------GCT-----G-GTCATAT------------------T----TGATAGCAATG-AG---GA
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            48616 32 +     76494 GCCGT-------GCT-----G-GTCATAT------------------T----TGATAGCAATG-AG---GA
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47509801 32 +  47705337 GCCGT-------GCT-----G-GTCATAT------------------T----TGATAGCAATG-AG---GA
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 63783 32 -    104429 GCCGT-------GCT-----G-GTCATAT------------------T----TGATAGCAATG-AG---GA
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  13569 32 -     29451 GCCGT-------GCT-----G-GTCATAT------------------T----TGATAGCAATG-AG---GA
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                33972 32 +     35859 GCCGT-------GCT-----G-GTCATAT------------------T----TGATAGCAATG-AG---GA
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    112118 34 -    135482 GCCAG-------TCT-----A-GTTATAT----------------ATT----GGACAGCAATG-AG---GA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           1921 10 -     23713 --------------------------------------------------------AG-AGTG-AG---GA
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            21218 10 -     27972 --------------------------------------------------------AG-AGTG-AG---GA
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      39802 34 -     45160 GTCAT-------GCT-----A-GTCATAT----------------TTC----CGGTGGCAATG-AA---GA
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4946606 34 -   8017169 ACCAT-------GCT-----T-GCTGTAT----------------ATT----TGATCACaatt-ag---ta
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            118528 35 -    122454 GCCAT-------GCT-----AAGTCTTCT----------------ACA----TGATAACAATG-AT---AA
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           1657 32 -      3310 GTCGT-------GCT-----G-GTCACAT------------------T----TGACAGCAATG-AG---GA
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       21563 32 -     82327 GTCGT-------GCT-----G-GTCACAT------------------T----TGACAGCAATG-AG---GA
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           18315 32 +     19957 GTCGT-------GCT-----G-GTCACAT------------------T----TGACAGCAATG-AG---GA
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26736324 32 +  26888534 GTCGT-------GCT-----G-GTCACAT------------------T----TGACAGCAATG-AG---GA
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            93573 31 +    112873 GCTAT-------GCA-----A-GCC--AT----------------ATT----TGATAGC-ATG-AG---GA
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             40309 34 -     61926 ATCAT-------GCT-----G-GTCATAT----------------ATC----TGATAGCAATA-AG---GA
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        21738 34 +     78826 ATCAT-------GCT-----G-GTCATAT----------------ATC----TGATAGCAATA-GG---GA
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              5689 34 -     15800 ATCAT-------GCT-----G-GTCATAT----------------ATC----TGATAGCAATA-AG---GA
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                         8887 34 -     16101 ATCAT-------GCT-----G-GTCATAT----------------ATC----TGATAGCAATA-AG---GA
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          2196 34 +      9673 ATCAT-------GCT-----G-GTCATAT----------------ATC----TGATAGCAATA-AG---GA
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13471190 34 -  19735023 ATCAT-------GCT-----G-GTCATAT----------------ATC----TGATAGCAATA-AG---GA
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           10098 34 -     31692 ATCAT-------GCT-----G-GTCATAT----------------ATC----TGATAGCAATA-AG---GA
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           2595 35 +     21690 GCCAT-------GCT-----AAGTCTTCT----------------ATT----TGGTAACAATG-AT---AA
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       19497 34 +     44506 ATCAT-------GCT-----G-GTCATAT----------------ATC----TGATAGCAATG-GG---GA
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        19715 34 +     67491 ATCAT-------GCT-----G-GTCATAT----------------ATC----TGATAGCAATG-GG---GA
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                       9960 34 -     98129 ATCAT-------GCT-----G-GTCATAT----------------ATC----TGATAGCAATG-GG---GA
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     19561 34 +    147771 ATCAT-------GCT-----G-GTCATAT----------------ATC----CGATAGCAATG-GG---GA
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        19811 34 -     23762 ATCAT-------GCT-----G-GTCATAT----------------ATC----TGATAGCAATG-GG---GA
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                           277 34 -     55515 ATCAT-------GCT-----G-GTCATAT----------------ATC----TGATAGCAATG-GG---GA
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         19630 34 +    152463 ATCAT-------GCT-----G-GTCATAT----------------ATC----TGATAGCAATG-GG---GA
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      6390 34 +      8943 ATCAT-------GCT-----G-GTCATAT----------------ATC----TGATAGCAATG-GG---GA
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                          9350 34 +    134592 ATCAT-------GCT-----G-GTCATAT----------------ATC----TGATAGCAATG-GG---GA
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          19940 34 -     75465 ATCAT-------GCT-----G-GTCATAT----------------ATC----TGATAGCAATG-GG---GA
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              183841 34 -    373494 GTCAT-------GCT-----G-GTCATAT----------------ATT----TGATAGCAATG-AG---GA
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19803745 34 +  19899266 GTCAT-------GCT-----G-GTCATAT----------------ATT----TGATAGCAATG-AG---GA
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               1894 32 -     15069 GTCGT-------GCT-----G-GTCACAT------------------T----TGACAGCAATA-AG---GA
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              2028 32 +     14865 GTCGT-------GCT-----G-GTCACAT------------------T----TGACAGCAATG-AG---GA
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                73218 24 +     78963 GCCAC-------CCT-----A-GTCAGAT----------------AG------GATGGC------------
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 I 1
s Prolemur_simus.MPIZ01000048.1                           6845233 34 +  12164890 ACCAT-------GCT-----A-GTCATAT----------------ATC----TGGTAGCAATG-AG---GG
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     13701 34 -     30946 gccAT-------ACT-----A-GTCATAT----------------ATC----TGATAGCAATG-AG---GA
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                          384 34 +     11805 GCCAT-------ACT-----A-TTCATAT----------------ATC----TGATAGCAATG-AG---GA
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           39715 34 +     52369 GCCAT-------ACT-----A-GTCATAT----------------ATC----TGATAGCAATG-AG---GA
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         32103 34 -     44753 GCCAT-------ACT-----A-GTCATAT----------------ATC----TGATAGCAATG-AG---GA
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            14025 34 +     27322 GCCAT-------ACT-----A-GTCATAT----------------ATC----TGATAGCAATG-AG---GA
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       13667 34 -     53241 GCCAT-------ACT-----A-GTCATAT----------------ATC----TGATAGCAATG-AG---GA
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         35939 34 -     48185 GCCAT-------ACT-----A-GTCATAT----------------ATC----TGATAGCAATG-AG---GA
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           29997 34 +     77221 GCCAT-------GCT-----T-GCTTTAT----------------GTC----TAATGACAATt-ag---ta
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            1135 33 -     27784 ATTGT-------GCA-----T-GTCATCT----------------ATT----TAATAGC-ATG-AG---GA
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        242663 34 -    344369 GCCAG-------GCT-----A-GTCACAT----------------ACT----GGATAGCAATG-AG---GA
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13243259 33 -  17261082 GCTAT-------GCT-----A-GTCATAT----------------ATT----TGATAGC-ATG-AA---GA
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             601213 33 -   3946241 GCTAT-------GCT-----A-GTCATAT----------------ATT----TGATAGC-ATG-AA---GA
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131530979 34 - 161321710 gCCAG-------GCT-----A-GTCATAT----------------ATT----GGATAGCAATG-AG---GA
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             26018 32 +     56732 GTCGT-------GCT-----G-GTCACAT------------------T----TGACAGCATTG-AG---GA
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6802508 32 +   6970761 GTCGT-------GCT-----G-GTCACAT------------------T----TGACAGCATTG-AG---GA
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             1900 32 +     18040 GTCGT-------GCT-----G-GTCACAT------------------T----TGACAGCATTG-AG---GA
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                13071 35 +     68503 GCCAT-------GTT-----AAGTCTTCT----------------ATC----TGATGACAGTG-AT---AC
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13911370 34 +  90463843 GCCAT-------GCT-----T-GCTATGT----------------ATC----TGATCACAATT-AG---TA
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1784864 33 +   2252614 GCCAT-------GCC-----A-GTCACAT----------------ATT----TGATAGC-ATC-AG---GA
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           12456 32 -     14454 GTCGT-------GCT-----G-GTCACAT------------------T----TGACAGCAATG-AG---GA
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206373782 32 - 206558726 GTTGT-------GCT-----G-GTCACAT------------------T----TGACAGCAATG-AG---GA
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44851430 32 -  45163003 GTCGT-------GCT-----G-GTCACAT------------------T----TGACAGCAATG-AG---GA
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                16562 33 +    109198 GCCAT-------GCT-----A-GTCATAT----------------ATT----TGATAGC-ATG-AG---GA
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       4851 35 +     12214 GCCAT-------GCT-----AAGTCTTCT----------------ATC----TGATGACAGTG-GT---AC
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15669398 34 -  43202129 atcat-------gCT-----G-GTCATAT----------------ATC----TGACAGTAATG-AG---GA
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        1264 34 +     34089 ATCAT-------GCT-----G-GTCATAT----------------ATC----TGACAGTAATG-AG---GA
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              1207 34 -     60842 ATCAT-------GCT-----G-GTCATAT----------------ATC----TGACAGTAATG-AG---GA
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              1284 34 +     67014 ATCAT-------GCT-----G-GTCATAT----------------ATC----TGACAGTAATG-AG---GA
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              1280 34 +     60816 ATCAT-------GCT-----G-GTCATAT----------------ATC----TGACAGTAATG-AG---GA
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 1217 34 -     76454 ATCAT-------GCT-----G-GTCATAT----------------ATC----TGACAGTAATG-AG---GA
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17337740 34 -  30362882 ATCAT-------GCT-----G-GTCATAT----------------ATC----TGACAGCAATG-AG---GA
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         17340 34 -     62485 ATCAT-------GCT-----G-GTCATAT----------------ATC----TGACAGCAATG-AG---GA
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   28616 34 -    114521 GCCAT-------GTT-----A-GTCATAT----------------ATT----TGATAACAATG-AA---GA
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1527475                       24443 32 +     26421 GTCAT-------GCT-----G-GTCACAT------------------T----TGACAGCAATG-AG---GA
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       4904 32 +     20762 GTCGT-------GCT-----G-GTCACAT------------------T----TGACAGCAATG-AG---GA
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         38638 32 +     40653 GTCAT-------GCT-----G-GTCACAT------------------T----TGACAGCAATG-AG---GA
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                            9196 32 -     12194 GTCGT-------GCT-----G-GTCACAT------------------T----TGACAGCAATG-AG---GA
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     22616 32 -     27512 GTCAT-------GCT-----G-GTCACAT------------------T----TGACAGCAATG-AG---GA
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         31637 32 -     33692 GTCGT-------GCT-----G-GTCACAT------------------T----TGACAGCAATG-AG---GA
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   94667 34 -    120886 GTCAT-------GGT-----T-GTGATAT----------------CAC----TAACTATAATT-AG---TA
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            14859 34 +    739146 GTCAT-------GCT-----A-GCTATAT----------------ATT----TGATAACCATG-AG---GA
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 I 265
s Sorex_araneus.JH798170.1                               17747515 33 -  27805282 gaga--------act-----a-gttatat----------------att----ttatactaatg-AA---AA
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2236627 32 +   2842873 GCCAT-------GCT-----A-ATTGT------------------ATC----TCATACTAATG-GG---AA
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             231660 34 -    276980 GCCAG-------GCT-----A-GTCACAT----------------ATT----GTATAGCAATA-AG---GA
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            24229 34 +     62062 GCCAG-------GAT-----A-GTCATAT----------------ATT----GGAAAGCAATG-AG---AA
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189269154 30 + 218635234 gctGT-------ACT-----A-TTCTTCT----------------ACT----TGATAGCAATT--------
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        11555 34 -  13920577 GTCAT-------GCT-----G-CTCATAT----------------ATT----TGATAGCAATG-AG---GA
i Symphalangus_syndactylus.tarseq_24                    I 137 I 298
s Tadarida_brasiliensis.TadBra_scaffold_145589               3068 33 -      6213 GCCAT-------GCA-----A-GTCTTAT----------------ATT----TGATAGT-ATG-AG---GA
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               12002 34 +     45698 GCCAT-------GCT-----A-GTGATAT----------------ATC----TGGTAGCAATG-AG---TA
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      804011 34 +   1148477 GCCAT-------GCT-----A-GTCACAT----------------ATT----TGATAGCAAAG-AG---GA
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  54671 34 +     99546 GCCAG-------CCT-----A-GTCACAT----------------ATT----TGATAGCAAAG-AG---GA
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               23348 28 +     42269 -------------CT-----A-GTCATAC----------------ATT----TTATAGCAATG-AA---CA
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               56662 28 +     65473 -------------CT-----A-GTCATAT----------------ATT----TTATAGCAATG-AA---CA
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194003940 32 - 194193292 GTCGT-------GCT-----G-GTCATAT------------------T----TGATAGCAATG-AG---GA
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                   855 34 +      6782 ACCGT-------GCT-----T-ATGATGT----------------ATC----TGGTAGCAATG-AG---GA
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  133142 33 -    259118 ATTGT-------CCA-----A-TTCATAT----------------ATC----TGATACC-ATG-AG---GA
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        23014 32 +     38948 GTCGT-------GCT-----G-GTCACAT------------------T----TGACAGCAATG-AG---GA
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   16741 32 -     32910 GTCGT-------GAT-----G-GTCACAT------------------T----TGACAGCAATG-AG---GA
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       22639 32 +     24652 GTCGT-------GCT-----G-GTCACAT------------------T----TGACAGCAATG-AG---GA
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      1523 30 -      3559 --TGT-------GCT-----G-GTCACAT------------------T----TGACAGCAATG-AG---GA
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           39463 32 -     54611 GTCGT-------GCT-----G-GTCACAT------------------T----TGACAGCAATG-AG---GA
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       15462 32 +     17312 GTCGT-------GCT-----G-GTCACAT------------------T----TGACAGCAATG-AG---GA
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    22831 30 -     25040 --TGT-------GCT-----G-GTCACAT------------------T----TGACAGCAATG-AG---GA
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          1497 30 +      3528 --TGT-------GCT-----G-GTCACAT------------------T----TGACAGCAATG-AG---GA
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  47859 30 +     51589 --TGT-------GCT-----G-GTCACAT------------------T----TGACAGCAATG-AG---GA
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       11028 32 +     14732 GTCGT-------GCT-----G-GTCACAT------------------T----TGACAGCAATG-AG---GA
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       1506 32 -     28054 GTCGT-------GAT-----G-GTCACAT------------------T----TGACAGCAATG-AG---GA
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44656301 32 -  44834318 GTCGT-------GAT-----G-GTCACAT------------------T----TGACAGCAATG-AG---GA
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        1311 32 +      3372 GTCGT-------GCT-----G-GTCACAT------------------T----TGACAGCAATG-AG---GA
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   2491 35 +     90398 GCCAT-------GCT-----AAGTCTTGT----------------ATC----TGATAGCAGTG-AT---AA
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16078595 34 +  31416278 TTCAT-------ACT-----A-GTCGTAT----------------GGC----TGATAGCACTG-AG---GA
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2788448 33 -   3938065 gcCAC-------ACT-----C-TCCATAT----------------ATC----TGATAGCAATG-AA---G-
i Tupaia_chinensis.KB320831.1                           I 7 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    1009 33 +     13056 GCCAC-------ACT-----C-TCCATAT----------------ATT----TGATAGCAATG-AA---G-
i Tupaia_tana.TupTan_flattened_line_68454               I 7 C 0
s Tursiops_truncatus.MRVK01000923.1                      69310629 35 -  96451834 GCCAT-------GCT-----AAGTCTTCT----------------ATA----TGGTAACAATG-AT---AA
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 23813 34 -     25548 ACCAT-------TTT-----A-GTCATAT----------------ATT----TGATTAGGATG-AA---AA
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6511247 34 +  28682327 GCCAA-------GCT-----A-GTCACAT----------------ATT----GGATAGGAATG-AG---GA
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  2172 28 -     20643 GCCAT-------GCT-----A-GTCATAT----------------ATC----TGGTAGCAA----------
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             21717 28 -     33872 GCCAT-------GCT-----A-GTCATAT----------------ATC----TGGTAGCAA----------
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1521946 31 -   2331223 GTCAT-------GCC-----A-CT---CC----------------ATT----TAACAGCAATT-AG---AA
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                134393 34 -    281493 GCCAG-------GCT-----A-GTCATAT----------------ATT----GGATAGCAATG-AG---GA
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       123720 32 -    134049 TCCAT-------GCT-----A-ATCCT------------------ATC----TTACAGTAATG-GA---AT
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        210926 34 -    227762 GCCAG-------GCT-----A-GTCACAT----------------ATT----GGATAGCAATG-AG---GA
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           4132 35 -      8775 GCCAT-------GCT-----AAGTCTTCT----------------ATT----TGGTAACAATG-AT---AA
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16291  1 -    119109 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     12283  2 -     20485 I
e Jaculus_jaculus.JH725517.1                              8561873  2 +  11848649 I
e Allactaga_bullata.AllBul_scaffold_70162                    8911  2 -     22067 I
e Nannospalax_galili.KL201303.1                            107449  0 +    362372 C
e Dolichotis_patagonum.DolPat_scaffold_14102                33375  0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             56104 16 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                14631 16 +     26546 I
e Cavia_tschudii.CavTsc_scaffold_488                       173989  0 +    436027 C
e Cavia_porcellus.DS562889.1                             15795798  0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15783848 16 -  24422027 I

a score=0.000000
s hg38.chr4_GL000008v2_random                                8586 4 +    209709 ATTT
s Acinonyx_jubatus.LLWD01000356.1                         2030673 4 +   3721120 ATTt
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    108952 4 -    189883 ATAT
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10654006 4 +  23371972 ATTT
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7090710 4 -  16596857 ATTT
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allenopithecus_nigroviridis.k141_3103707                  59608 4 +     61638 ATTT
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        51416 4 +     53391 ATTT
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         2140 4 +     72529 ATTT
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          1716 4 +      3797 ATTT
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             6896 4 -     18050 ATTT
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  8011 4 -     11521 ATTT
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              7573 4 -     21359 ATTT
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1856473                                5954 4 +      7227 ATTT
i Alouatta_juara.k141_1856473                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          6868 4 -     10438 ATTT
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            3523 4 +      7047 ATTT
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             6810 4 +     10410 ATTT
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                             608 4 -      4927 ATTT
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             3541 4 +      6429 ATTT
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3517429 4 +   4113121 ATTT
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      387623 4 -    631301 GTTT
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            28062 4 +     33004 ATTT
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 59255 4 +     78111 ATTT
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            2185 4 +     22701 ATTT
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5746143 4 +   9889416 ATTT
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             2724 4 -    104377 ATTT
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               2733 4 +     23246 ATTT
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                      610 4 +      5067 ATTT
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      14748 4 +     17483 ATTG
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 5728 4 -     29036 GTTT
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 I 37
s Ateles_geoffroyi_b.tarseq_2582                             9535997 4 +  39197703 ATTT
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             57281 4 +     85812 ATTT
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 8280 4 +     89302 ATTT
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             12790 4 -     58268 GTTT
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             60776 4 +    119057 ATCT
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               2727 4 -     25888 ATTT
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 3489 4 -     16375 ATTT
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_767228                               9438 4 -      9688 ATTT
i Avahi_peyrierasi.k141_767228                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26377382 4 +  51448160 ATGT
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        2613 4 -     13118 ATGT
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   40529 4 -     72089 ATTT
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6556673 4 +   6870073 ATTT
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138136907 4 - 161108492 ATTT
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     569285 4 -    998990 ATTT
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136292640 4 - 158972876 ATTT
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1228261 4 -   1914593 ATTT
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               110630 4 -    171031 ATTT
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                  9656 4 +    125063 ATTT
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                11704 4 -    216513 ATTT
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        4244 4 -    134917 ATTT
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3216896 3 -   8989139 ATG-
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           394597 3 -  15254737 ATG-
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2970334 3 +   6889770 ATG-
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11515383 4 +  39901454 ATTT
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   10400 4 +     87036 ATTT
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11262042 4 -  35597290 ATTT
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11084571 4 +  39895921 ATTT
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16451605 4 -  44759192 ATTT
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21322536 4 + 157394656 ATTT
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135703763 4 - 157403528 ATTT
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_647363                  1304 4 +      1887 ACTT
i Capromys_pilorides.CapPil_scaffold_647363             C 0 C 0
s Carlito_syrichta.NW_007248099.1                          305885 4 +    345090 ATtt
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               56804 4 +     67245 GTTT
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   27308 4 +     33760 ATTT
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Cebus_albifrons.Contig22                               18887470 4 -  29618158 ATTT
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 5014 4 -     26817 ATTT
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                 9257 4 +     25043 ATTT
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         4931 4 +     21754 ATTT
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4360592 4 +   7569818 ATTT
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623          347 4 -      9338 ATTT
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6551404 4 +   6739814 ATTT
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      52881 4 -     54931 ATTT
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         17865 4 -     19697 ATTT
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         55396 4 -    107033 ATTT
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        1837 4 -      3853 ATTT
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          25770 4 +     30494 ATTT
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           1794 4 -      4022 ATTT
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          1687 4 -      3505 ATTT
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           20491 4 +     35983 ATTT
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11987013 4 +  12117833 ATTT
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46473766 4 +  46592721 ATTT
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      31593 4 +     33420 ATTT
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        1629 4 -      3443 ATTT
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      2620 4 -      4669 ATTT
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        2420 4 -      4411 ATTT
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         1945 4 -      4205 ATTT
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_1070855           163 4 -      1715 AATT
i Chaetophractus_vellerosus.ChaVel_scaffold_1070855     C 0 C 0
s Cheirogaleus_major.k141_1157592                           55794 4 -     68416 ATTT
i Cheirogaleus_major.k141_1157592                       C 0 I 4
s Cheirogaleus_medius.k141_133808                            4843 4 +     13308 ATTT
i Cheirogaleus_medius.k141_133808                       C 0 I 4
s Cheracebus_lucifer.k141_619653                             2273 4 -     18223 ATTT
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             19296 4 +     25473 ATTT
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           38335 4 +     57117 ATTT
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          43010 4 +     54541 ATTT
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15958676 4 +  43084221 ATct
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         67851 4 +    196370 ATTT
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          12032 4 +     40510 ATTT
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15135226 4 -  15256731 ATTT
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      30272 4 -     53260 ATTT
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101140721 4 + 101219884 ATTT
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                13786 4 -     21363 ATTT
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           759092 4 +    964067 ATTT
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_141308              5881 4 -     12508 ATTC
i Chrysochloris_asiatica.ChrAsi_scaffold_141308         C 0 C 0
s Colobus_angolensis.KN985967.1                          10879300 4 +  10971483 ATTT
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147660458 4 + 156195979 ATTT
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            12444 4 +     23629 ATTT
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60610055 4 +  78930452 CTTC
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         36513 4 -     40477 ATTT
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 274395 4 -    399297 ATTT
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53025576 4 +  72327488 ATTT
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             16039 4 -     19186 ATTC
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            48701 4 -     70449 ATTT
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  205111 4 -    956709 ATCC
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 27372 4 -     67205 ACTT
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          178974 4 -   6883506 attt
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16841665 4 +  31942871 ATTT
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80034128 4 -  96802777 ATGT
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18696117 4 -  18957592 GTTT
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 319254 4 +    993696 ATTT
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_170113                  512 4 +       818 ATTT
i Diceros_bicornis.DicBicMic_scaffold_170113            C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   154545 1 +    228994 A---
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3652293 4 +   4240102 ATTT
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 23847 4 +     28912 ATTT
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Echinops_telfairi.JH980316.1                           22991385 4 -  44670279 ATTC
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                  9496 4 +     24177 attt
i Eidolon_helvum.KE772537.1                             C 0 I 4
s Elaphurus_davidianus.JRFZ01086400.1                     1488797 4 +   1727528 ATTT
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7803552 4 +  15467074 ATTA
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        236044 4 -    369425 ATTT
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           3051 4 -      7838 ATTT
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85868432 4 +  99434291 ATTT
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Equus_asinus.JREZ01000062.1                             5849983 4 -   7175178 ATTT
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13348486 4 +  41866177 ATTT
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                           9976 4 +     92910 ATTT
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11529572 4 +  16010500 ACTC
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48767405 4 -  48907691 ATTT
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          312266 4 +    330699 ATGT
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             58695 4 +     89355 ATGT
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              1866 4 +     13586 ATTT
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               1802 4 -      6809 ATTT
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             8274 4 +     36558 ATTT
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             4590 4 +     60246 ATTT
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 8078 4 +    109717 ATTT
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               12452 4 +     16540 ATTT
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                12729 4 +     27497 ATTT
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           15190 4 +     26808 ATTT
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                29918 4 +     46535 ATTT
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              12641 4 -     29447 ATTT
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129889653 4 - 159252932 ATTt
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129276727 4 - 158578461 ATTt
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 17862 4 +     52776 ATTT
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13889852 4 -  19261668 attt
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     207802 4 -    847004 ATTG
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           10182 4 -     43889 ATTG
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           7234 4 +     27357 ATTG
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               153118 4 +    324696 ATTT
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    178312 4 -    189561 ATTT
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Gorilla_beringei.k141_111300                               1981 4 -     14630 ATTT
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119649079 4 - 195582420 ATTT
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                         2407 4 +      3980 ATTT
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             24887 4 +     26611 ATTT
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             2341 4 +     56096 ATTT
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        25614 4 -     42470 ATTT
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        42211 4 -     54384 ATTT
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              13906 4 +     53719 ATTT
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                24798 4 -     91191 ATTT
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2547993 4 +  31725842 attt
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               53379 4 +     73687 ATCA
i Heterohyrax_brucei.HetBruBak_scaffold_25354           I 1 C 0
s Hipposideros_armiger.JXIK01001085.1                      275812 4 -    477199 ACTT
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              4967 4 -      9143 ACTT
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg649                                    98651 4 +    115816 ATTT
i Hoolock_leuconedys.ctg649                                C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 12975 4 -     67322 ATTT
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hylobates_abbotti.k141_493872                              1788 4 +      5897 ATTT
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_282275                               1002 4 +      1846 ATTT
i Hylobates_agilis.k141_282275                          C 0 C 0
s Hylobates_klossii.k141_584463                               165 4 -      1009 ATTT
i Hylobates_klossii.k141_584463                         I 34 I 12
s Hylobates_muelleri.k141_1133650                            1223 4 -      2775 ATCT
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             29825 4 -     60944 ATTT
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     2947 4 +     22540 ACTT
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7122735 4 +  13083262 ATTT
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 I 4
s Indri_indri.k141_3334527                                   8856 4 +      9207 ATTT
i Indri_indri.k141_3334527                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               6055 4 +     17520 ATGT
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               20887 4 +     37189 ATGT
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          46850 4 -    147782 ATTT
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   110992 4 -    115756 ATTT
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258403893 4 - 285822530 ATTT
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        20791 4 +     39228 ATTT
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            50165 4 +     63517 ATTT
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        75387 4 +    116806 ATTT
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     28428 4 -     33031 ATTT
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3082674 4 -   3498232 ACTT
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                     9887 4 +     22452 ACTT
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            133230 4 +   3060487 atgT
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19244492 4 +  19376315 ATTT
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            7533 4 +     84689 ACTG
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3775284 4 +   6799190 ACTG
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20588146 4 -  62548349 ATTC
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11084027 4 +  39895028 ATTT
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             16175 4 +     74745 ATTT
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12702681 4 +  12821369 ATTT
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               4777 4 +      6569 ATTT
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           43078 4 +     63263 ATTT
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_1068107                               11654 4 +     12679 ATTT
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                1227 4 +      3017 ATTT
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  42839 4 -     79256 ATTT
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196031757 4 + 196197964 ATTT
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11441863 4 +  11645122 ATTT
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   1786 4 -     46448 ATTT
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                1616 4 -      3617 ATTT
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 11949 4 -     55006 ATTT
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43836986 4 +  43892939 ATTT
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                4209 4 -      5978 ATTT
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               1791 4 -     27140 ATTT
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43433652 4 -  43563597 ATTT
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4446478 4 -   4543643 ATTT
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            143291 4 +    252755 ATTC
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             33356 4 +     58827 ATTC
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36870582 4 +  64221397 ATTT
i Marmota_marmota.CZRN01000005.1                        C 0 I 4
s Megaderma_lyra.MegLyr_scaffold_3562                       61570 4 -    234502 ATTT
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_1828            225930 4 -    226874 ATTT
i Mellivora_capensis.MelCap_flattened_line_1828         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233                8500 4 +     15977 ATAT
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1043307 4 -  26018355 attt
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_183284                    926 4 +      2166 ATGT
i Mesoplodon_bidens.MesBid_scaffold_183284              C 0 C 0
s Microcebus_murinus.CM007691.1                          16507010 4 +  47401472 attt
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  28331 4 -     48017 ATTC
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               19965 4 -     32043 GTTT
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22816191 4 -  98408828 ATTT
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8206687 4 +  10048721 ATTT
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            31368 4 +     45743 ATTT
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        32307 4 +     34273 ATTT
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         7972 4 -    104932 ACTT
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     2423 4 +      8497 ATTT
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 143653 4 +    154973 ATGT
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                158501 4 +    265003 gTTT
i Mormoops_blainvillei.MorMeg_scaffold_2952             I 1 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 1897 4 -      4346 ATTT
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  141596 4 -    168139 ATTT
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          16504 4 -    100666 ATTT
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70762038 4 +  92629107 GAAT
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75485160 4 +  98207768 GAAT
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67549478 4 +  89017189 GAAT
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74324580 4 +  97876770 GAAT
i Mus_spretus.CM004110.1                                C 0 C 0
s Mustela_putorius.JH417978.1                             4420825 4 -  28371801 ATTT
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     86996 4 -    117718 ACTT
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 I 1
s Myotis_brandtii.KE161952.1                               964831 4 +   8389877 ATTT
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5016508 4 +   6462685 ATTC
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3462417 4 -   3747815 ATTT
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         7606 4 +     66751 ATTT
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             2363 4 -      8794 ATTT
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nasalis_larvatus.k141_153429                               4688 4 +     48152 ATTT
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4481573 4 -  14209539 ACTT
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3948262 4 -   4490290 ATGT
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  46618 4 +     94413 GTTT
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1223136                          10457 4 -     11253 ATTT
i Nomascus_annamensis.k141_1223136                      C 0 C 0
s Nomascus_concolor.k141_468488                              1100 4 -      1482 ATTT
i Nomascus_concolor.k141_468488                         C 0 C 0
s Nomascus_gabriellae.k141_906566                            1089 4 -      2544 ATTT
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             21563 4 -  18771707 ATTT
i Nomascus_siki_b.tarseq_80                         C 0 I 12
s Nomascus_siki_a.k141_844529                                   837 4 +      2124 ATTT
i Nomascus_siki_a.k141_844529                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                27022 4 +   3668941 ATTT
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65563863 4 -  95554990 ATTG
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                             708 4 +      6470 ATTG
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65666232 4 +  89412551 ATTG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4992567 4 -  23139505 ATTT
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3676884 4 +  10294119 aaag
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             676231 4 -   3126709 ACTT
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1077020 4 +   1425656 ATTT
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         34184 4 +     78940 ATTT
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  121523 4 +    145789 ATTT
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  33466 4 +     62360 ATTT
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7221946 4 -   7562323 ATGT
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              40403 4 -     66828 ACTT
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141872536 4 + 163896628 ACTT
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      304357 4 -    505867 ATTT
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       35870 4 +     38679 ATTG
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18005311 4 -  38779656 ATTG
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134074600 4 - 275406953 ATTT
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      75814 4 +    140051 ATTT
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127571321 4 - 205426864 attt
i Pan_paniscus.CM003386.1                               C 0 I 30
s Pan_troglodytes.CM009241.2                            120148468 4 - 196562556 attt
i Pan_troglodytes.CM009241.2                            C 0 I 57
s Panthera_onca.PanOnc_flattened_line_1615                  30818 4 +    295523 ATTT
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3634422 4 +  18214204 ATTt
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5024199 4 -   6340057 ATTt
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1063458 4 -   1292953 ATTT
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188152436 4 - 188283584 ATTT
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            48648 4 +     76494 ATTT
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47509833 4 +  47705337 ATTT
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 63815 4 -    104429 ATTT
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  13601 4 -     29451 ATTT
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                34004 4 +     35859 ATTT
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    112152 4 -    135482 ATTT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           1931 4 -     23713 ATTG
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            21228 4 -     27972 ATTG
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      39836 4 -     45160 ATTT
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4946640 4 -   8017169 attt
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            118563 4 -    122454 ATGT
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           1689 4 -      3310 ATTT
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       21595 4 -     82327 ATTT
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           18347 4 +     19957 ATTT
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26736356 4 +  26888534 ATTT
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            93604 4 +    112873 ATTT
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             40343 4 -     61926 ATTT
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        21772 4 +     78826 ATTT
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              5723 4 -     15800 ATTT
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                         8921 4 -     16101 ATTT
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          2230 4 +      9673 ATTT
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13471224 4 -  19735023 ATTT
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           10132 4 -     31692 ATTT
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           2630 4 +     21690 ATGT
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       19531 4 +     44506 ATTT
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        19749 4 +     67491 ATTT
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                       9994 4 -     98129 ATTT
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     19595 4 +    147771 ATTT
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        19845 4 -     23762 ATTT
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                           311 4 -     55515 ATTT
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         19664 4 +    152463 ATTT
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      6424 4 +      8943 ATTT
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                          9384 4 +    134592 ATTT
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          19974 4 -     75465 ATTT
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              183875 4 -    373494 ATTT
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19803779 4 +  19899266 ATTT
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               1926 4 -     15069 ATTT
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              2060 4 +     14865 ATTT
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                73243 4 +     78963 ATCA
i Procavia_capensis.ProCapCap_scaffold_15315            I 1 C 0
s Prolemur_simus.MPIZ01000048.1                           6845267 4 +  12164890 ATTT
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     13735 4 -     30946 ATTT
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                          418 4 +     11805 ATTT
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           39749 4 +     52369 ATTT
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         32137 4 -     44753 ATTT
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            14059 4 +     27322 ATTT
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       13701 4 -     53241 ATTT
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         35973 4 -     48185 ATTT
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           30031 4 +     77221 atat
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            1168 4 -     27784 GTTT
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        242697 4 -    344369 ATTT
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13243292 4 -  17261082 ATTC
i Pteropus_alecto.KB031157.1                            C 0 I 4
s Pteropus_vampyrus.KN525959.1                             601246 4 -   3946241 ATTC
i Pteropus_vampyrus.KN525959.1                          C 0 I 4
s Puma_concolor.QAVW01000427.1                          131531013 4 - 161321710 ATTt
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             26050 4 +     56732 ATTT
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6802540 4 +   6970761 ATTT
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             1932 4 +     18040 ATTT
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                13106 4 +     68503 ATTT
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13911404 4 +  90463843 GAAT
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1784897 4 +   2252614 ATTT
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           12488 4 -     14454 ATTT
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206373814 4 - 206558726 ATTT
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44851462 4 -  45163003 ATTT
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                16595 4 +    109198 ATTT
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       4886 4 +     12214 ATTT
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15669432 4 -  43202129 ATTT
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        1298 4 +     34089 ATTT
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              1241 4 -     60842 ATTT
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              1318 4 +     67014 ATTT
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              1314 4 +     60816 ATTT
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 1251 4 -     76454 ATTT
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17337774 4 -  30362882 ATTT
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         17374 4 -     62485 ATTT
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   28650 4 -    114521 CTTC
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1527475                       24475 4 +     26421 ATTT
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       4936 4 +     20762 ATTT
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         38670 4 +     40653 ATTT
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                            9228 4 -     12194 ATTT
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     22648 4 -     27512 ATTT
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         31669 4 -     33692 ATTT
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   94701 4 -    120886 ATTT
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            15158 4 +    739146 ATTC
i Solenodon_paradoxus.SolPar_flattened_line_1012        I 265 C 0
s Sorex_araneus.JH798170.1                               17747548 4 -  27805282 ATTC
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2236659 4 +   2842873 ATTT
i Spermophilus_dauricus.KZ294190.1                      C 0 I 4
s Spilogale_gracilis.SpiGra_flattened_line_905             231694 4 -    276980 ATTT
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            24263 4 +     62062 ATTT
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Symphalangus_syndactylus.tarseq_24                     13898622 4 +  13920577 ATTT
i Symphalangus_syndactylus.tarseq_24                    I 34 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               3101 4 -      6213 ATTT
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               12036 4 +     45698 ATTT
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      804045 4 +   1148477 ATTT
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  54705 4 +     99546 ATTT
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               23376 4 +     42269 ATTT
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               56690 4 +     65473 ATTT
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194003972 4 - 194193292 ATTT
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                   889 4 +      6782 ATTT
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  133175 4 -    259118 GTTT
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        23046 4 +     38948 ATTT
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   16773 4 -     32910 ATTT
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       22671 4 +     24652 ATTT
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      1553 4 -      3559 ATTT
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           39495 4 -     54611 ATTT
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       15494 4 +     17312 ATTT
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    22861 4 -     25040 ATTT
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          1527 4 +      3528 ATTT
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  47889 4 +     51589 ATTT
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       11060 4 +     14732 ATTT
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       1538 4 -     28054 ATTT
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44656333 4 -  44834318 ATTT
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        1343 4 +      3372 ATTT
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   2526 3 +     90398 ATT-
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16078629 4 +  31416278 ATTG
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69310664 4 -  96451834 ATGT
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 23847 4 -     25548 CTTC
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6511281 4 +  28682327 ATTT
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Vicugna_pacos.KN269600.1                                1521977 3 -   2331223 ATG-
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                134427 4 -    281493 ATTT
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 I 3
s Xerus_inauris.XerIna_scaffold_7898                       123752 4 -    134049 ATTT
i Xerus_inauris.XerIna_scaffold_7898                    C 0 I 4
s Zalophus_californianus.ZalCal_flattened_line_4097        210960 2 -    227762 AC--
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           4167 4 -      8775 ATGT
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Sus_scrofa.CM000824.4                                 189269184 0 + 218635234 C
e Hippopotamus_amphibius.HipAmp_scaffold_1308              144382 0 +    277961 C
e Catagonus_wagneri.CatWag_scaffold_1305                   156115 0 -    276539 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16291 1 -    119109 I
e Glis_glis.GliGli_scaffold_79770                            9523 0 -     18683 C
e Zapus_hudsonius.ZapHud_scaffold_64392                     12283 2 -     20485 I
e Jaculus_jaculus.JH725517.1                              8561873 2 +  11848649 I
e Allactaga_bullata.AllBul_scaffold_70162                    8911 2 -     22067 I
e Varecia_variegata.k141_775891                             21745 0 -     33872 C
e Varecia_rubra.k141_432109                                  2200 0 -     20643 C
e Tupaia_tana.TupTan_flattened_line_68454                    1042 0 +     13056 C
e Tupaia_chinensis.KB320831.1                             2788481 0 -   3938065 C
e Nannospalax_galili.KL201303.1                            107449 0 +    362372 C
e Muscardinus_avellanarius.MusAve_scaffold_9643              8036 0 +     98495 C
e Graphiurus_murinus.GraMur_scaffold_4493                   74077 0 +    118900 C
e Dolichotis_patagonum.DolPat_scaffold_14102                33375 0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             56104 16 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                14631 16 +     26546 I
e Cavia_tschudii.CavTsc_scaffold_488                       173989 0 +    436027 C
e Cavia_porcellus.DS562889.1                             15795798 0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15783848 16 -  24422027 I

a score=0.000000
s hg38.chr4_GL000008v2_random                                8590 12 +    209709 ACT---T---ATT---------AT-A--TA
s Acinonyx_jubatus.LLWD01000356.1                         2030677 12 +   3721120 act---c---ttc---------at-a--ta
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    108956 12 -    189883 ATT---TGCAT------------T-A--CA
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10654010 12 +  23371972 AGT---T---GAA---------GT-A--TA
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7090714 12 -  16596857 ACT---T---GCG---------AT-A--TA
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allenopithecus_nigroviridis.k141_3103707                  59612 12 +     61638 ACT---T---ATT---------AT-A--TA
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        51420 12 +     53391 ACT---T---ATT---------AT-A--TA
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         2144 12 +     72529 ACT---T---ATT---------AT-A--TA
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          1720 12 +      3797 ACT---T---ATT---------AT-A--TA
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             6900 12 -     18050 ACT---T---ATC---------GT-A--TA
i Alouatta_belzebul.k141_1818029                        C 0 I 1
s Alouatta_caraya.k141_5460                                  8015 12 -     11521 ACT---T---ATC---------GT-A--TA
i Alouatta_caraya.k141_5460                             C 0 I 2
s Alouatta_discolor.k141_811576                              7577 12 -     21359 ACT---T---ATC---------GT-A--TA
i Alouatta_discolor.k141_811576                         C 0 I 1
s Alouatta_juara.k141_1856473                                5958 12 +      7227 ACT---T---ATC---------GT-A--TA
i Alouatta_juara.k141_1856473                           C 0 I 2
s Alouatta_macconnelli.k141_1331706                          6872 12 -     10438 ACT---T---GTC---------GT-A--TA
i Alouatta_macconnelli.k141_1331706                     C 0 I 2
s Alouatta_nigerrima.k141_2718643                            3527 12 +      7047 ACT---T---GTC---------GT-A--TA
i Alouatta_nigerrima.k141_2718643                       C 0 I 2
s Alouatta_palliata.k141_1316127                             6814 12 +     10410 ACT---T---ATC---------GT-A--TA
i Alouatta_palliata.k141_1316127                        C 0 I 2
s Alouatta_puruensis.k141_1284840                             612 12 -      4927 ACT---T---ATC---------GT-A--TA
i Alouatta_puruensis.k141_1284840                       C 0 I 2
s Alouatta_seniculus.k141_990213                             3545 12 +      6429 ACT---T---ATC---------GT-A--TA
i Alouatta_seniculus.k141_990213                        C 0 I 2
s Ammotragus_lervia.NIVO01013474.1                        3517433 12 +   4113121 ATT---T---GTC---------AT-A--TA
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      387627 12 -    631301 ACT---T---CTC---------AT-A--TA
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            28066 12 +     33004 ATT---T---GTC---------AT-A--TA
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 59259 12 +     78111 ACT---T---ATC---------AT-A--TA
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            2189 12 +     22701 ACT---T---ATC---------AT-A--TA
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5746147 12 +   9889416 ACT---T---ATC---------AT-A--TA
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             2728 12 -    104377 ACT---T---ATC---------AT-A--TA
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               2737 12 +     23246 ACT---T---ATC---------AT-A--TA
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                      614 12 +      5067 ACTTATC---A------------T-A--CA
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      14752  9 +     17483 ACT---T---A------------T-G--TA
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 5769 12 -     29036 ATT---T---AAA---------AT-A--TA
i Artibeus_jamaicensis.ArtJam_scaffold_41619            I 37 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9536001 12 +  39197703 ACT---T---ATC---------GT-A--TA
i Ateles_geoffroyi_b.tarseq_2582                           C 0 I 1
s Ateles_belzebuth.k141_1348307                             57285 12 +     85812 ACT---T---ATC---------GT-A--TA
i Ateles_belzebuth.k141_1348307                         C 0 I 1
s Ateles_chamek.k141_1072810                                 8284 12 +     89302 ACT---T---ATC---------GT-A--TA
i Ateles_chamek.k141_1072810                            C 0 I 1
s Ateles_geoffroyi_a.k141_1300742                             12794 12 -     58268 ACT---T---ATC---------GT-A--TA
i Ateles_geoffroyi_a.k141_1300742                         C 0 I 1
s Ateles_marginatus.k141_899112                             60780 12 +    119057 ACT---T---ATC---------GT-A--TA
i Ateles_marginatus.k141_899112                         C 0 I 1
s Ateles_paniscus.k141_1631200                               2731 12 -     25888 ACT---T---ATC---------GT-G--TA
i Ateles_paniscus.k141_1631200                          C 0 I 1
s Avahi_laniger.k141_2840928                                 3493 12 -     16375 GCT---T---ATC---------AT-A--TA
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_767228                               9442 12 -      9688 GCT---T---ATC---------AT-A--TA
i Avahi_peyrierasi.k141_767228                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26377386 12 +  51448160 ATT---T---GTC---------AC-A--TA
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        2617 12 -     13118 ATT---T---GTC---------AC-A--TA
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   40533 12 -     72089 ATT---T---GTC---------AT-A--TA
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6556677 12 +   6870073 ATT---T---GTC---------AT-A--TA
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138136911 12 - 161108492 ATT---T---GTC---------AT-A--TA
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     569289 12 -    998990 ATT---T---GTC---------AT-A--TA
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136292644 12 - 158972876 ATT---T---GTC---------AT-A--TA
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1228265 12 -   1914593 ATT---T---GTC---------AT-A--TA
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               110634 12 -    171031 ACT---T---ATC---------AT-A--TA
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                  9660 12 +    125063 ACT---T---ATC---------AT-A--TA
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                11708 12 -    216513 ACT---T---ATG---------AT-A--TA
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        4248 12 -    134917 ACT---T---ATC---------AT-A--TA
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3216899  9 -   8989139 ------T---gtc---------aa-a--ta
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           394600  9 -  15254737 ------T---gtc---------aa-a--ta
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2970337  9 +   6889770 ------T---gtc---------aa-a--ta
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11515387 12 +  39901454 GCT---T---ATC---------AT-A--TA
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   10404 12 +     87036 GCT---T---ATC---------AT-A--TA
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11262046 12 -  35597290 GCT---T---ATc---------at-a--ta
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11084575 12 +  39895921 GCT---T---ATc---------at-a--ta
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16451609 12 -  44759192 GCT---T---ATc---------at-a--ta
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21322540 12 + 157394656 ATT---T---GTC---------AT-A--TA
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135703767 12 - 157403528 ATT---T---GTC---------AT-A--TA
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_647363                  1308  9 +      1887 CAT---T---A------------T-A--TT
i Capromys_pilorides.CapPil_scaffold_647363             C 0 C 0
s Carlito_syrichta.NW_007248099.1                          305889 12 +    345090 act---t---att---------gt-t--ta
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               56808 12 +     67245 ACT---T---CTC---------AT-A--TA
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   27312 10 +     33760 ATT---T-C-A------------T-A--TA
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   156115  4 -    276539 ----------GTC---------A-------
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 I 2
s Cebus_albifrons.Contig22                               18887474 12 -  29618158 AAT---T---ATT---------AT-A--TA
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 5018 12 -     26817 AAT---T---ATT---------AT-A--TA
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                 9261 12 +     25043 AAT---T---ATT---------AT-A--TA
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         4935  6 +     21754 ACT---T---TT------------------
i Cephalopachus_bancanus.k141_702587                    C 0 I 2
s Ceratotherium_simum.JH767818.1                          4360596 12 +   7569818 ACC---T---atc---------aa-a--ta
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623          351 12 -      9338 ACC---T---ATC---------AA-A--TA
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6551408 12 +   6739814 ACT---T---ATT---------AT-A--TA
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      52885 12 -     54931 ACT---T---ATT---------AT-A--TA
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         17869 12 -     19697 ACT---T---ATT---------AT-A--TA
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         55400 12 -    107033 ACT---T---ATT---------AT-A--TA
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        1841 12 -      3853 ACT---T---ATT---------AT-A--TA
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          25774 12 +     30494 ACT---T---ATT---------AT-A--TA
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           1798 12 -      4022 ACT---T---ATT---------AT-A--TA
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          1691 12 -      3505 ACT---T---ACT---------AT-A--TA
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           20495 12 +     35983 ACT---T---ATT---------AT-A--TA
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11987017 12 +  12117833 ACT---T---ATT---------AT-A--TA
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46473770 12 +  46592721 ACT---T---ATT---------AT-A--TA
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      31597 12 +     33420 ACT---T---ATT---------AT-A--TA
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        1633 12 -      3443 ACT---T---ATT---------AT-A--TA
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      2624 12 -      4669 ACT---T---ATT---------AT-A--TA
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        2424 12 -      4411 ACT---T---ATT---------AT-A--TA
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         1949 12 -      4205 ACT---T---ATT---------AT-A--TA
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_1070855           167 12 -      1715 ACT---T---GTT---------GT-T--TA
i Chaetophractus_vellerosus.ChaVel_scaffold_1070855     C 0 C 0
s Cheirogaleus_major.k141_1157592                           55802  5 -     68416 ----------------------AT-A--TA
i Cheirogaleus_major.k141_1157592                       I 4 C 0
s Cheirogaleus_medius.k141_133808                            4851  5 +     13308 ----------------------AT-A--TA
i Cheirogaleus_medius.k141_133808                       I 4 C 0
s Cheracebus_lucifer.k141_619653                             2277 12 -     18223 ACT---T---ATC---------AT-A--TA
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             19300 12 +     25473 ACT---T---ATC---------AT-A--TA
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           38339 12 +     57117 ACT---T---ATC---------AT-A--TA
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          43014 12 +     54541 ACT---T---ATC---------AT-A--TA
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15958680  9 +  43084221 act---t---a------------t-a--tt
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         67855 12 +    196370 ACT---T---ATC---------AT-A--TA
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          12036 12 +     40510 ACT---T---ATC---------GT-A--TA
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15135230 12 -  15256731 ACT---T---ATT---------AT-A--TA
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      30276 12 -     53260 ACT---T---ATT---------AT-A--TA
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101140725 12 + 101219884 ACT---T---ATT---------AT-A--TA
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                13790 12 -     21363 ACT---T---GTC---------AC-T--TA
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           759096 12 +    964067 ACT---T---GTC---------AC-T--TA
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_141308              5885 12 -     12508 ACT---T---TTC---------AT-A--TA
i Chrysochloris_asiatica.ChrAsi_scaffold_141308         C 0 C 0
s Colobus_angolensis.KN985967.1                          10879304 12 +  10971483 ACT---T---ATT---------AC-G--TA
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147660462 12 + 156195979 ACT---T---ATT---------AT-G--TA
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            12448 12 +     23629 ACT---T---ATT---------AC-G--TA
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60610059 12 +  78930452 ACA---T---GAc---------at-a--ta
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         36517 12 -     40477 ACT---T---GTC---------AC-A--TA
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 274399 12 -    399297 ATT---TGCAA------------T-A--TA
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53025580 11 +  72327488 ATT---CGC-a------------t-a--ta
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             16043 12 -     19186 AAA---A---CTG---------AT-A--TG
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 I 2
s Cryptoprocta_ferox.CryFer_flattened_line_19014            48705 12 -     70449 ACT---T---ATC---------AT-A--TA
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  205115  9 -    956709 ATT---T---A------------T-A--GA
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 27376  9 -     67205 AAT---T---A------------T-A--TT
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          178978 11 -   6883506 -ct---t---gtt---------at-t--ta
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16841669 12 +  31942871 ACC---T---ATC---------AT-A--TA
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80034132 12 -  96802777 ATT---T---GTC---------AC-A--TA
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18696121 12 -  18957592 ACT---T---ctc---------at-a--ta
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 319258 12 +    993696 ACC---T---atc---------at-a--ta
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_170113                  516 12 +       818 ACC---T---ATC---------AA-A--TA
i Diceros_bicornis.DicBicMic_scaffold_170113            C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   154546  8 +    228994 -CT---T---A------------T-A--TT
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3652297 12 +   4240102 ATT---TGcca------------t-a--ta
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 23851 12 +     28912 ATT---TGCCA------------T-A--TA
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Echinops_telfairi.JH980316.1                           22991389 12 -  44670279 ACT---T---GTC---------AT-A--AA
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                  9504  5 +     24177 ----------------------ac-a--ta
i Eidolon_helvum.KE772537.1                             I 4 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1488801 12 +   1727528 ATT---T---GTC---------AT-A--TA
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 I 1
s Elephantulus_edwardii.JH947210.1                        7803556 12 +  15467074 ATT---T---GTC---------TT-A--TG
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        236048 12 -    369425 ATT---TGCCa------------t-a--ta
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           3055 12 -      7838 ATT---TGtca------------t-a--ta
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85868436 12 +  99434291 CCT---T---GCC---------AT-A--TA
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Equus_asinus.JREZ01000062.1                             5849987 12 -   7175178 GCC---T---ATC---------AT-A--TA
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13348490 12 +  41866177 GCC---T---ATC---------AT-A--TA
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                           9980 12 +     92910 GCC---T---ATC---------AT-A--TA
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11529576 12 +  16010500 ACT---T---Gtt---------at-a--ta
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48767409 12 -  48907691 ACT---T---ATT---------AC-A--TA
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          312270 12 +    330699 ATT---T---GTC---------AC-A--TA
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             58699 12 +     89355 ATT---T---GTC---------AC-A--TA
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              1870 12 +     13586 ACT---T---ATC---------TT-A--TA
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               1806 12 -      6809 ACT---T---ATC---------AT-A--TA
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             8278 12 +     36558 ACT---T---ATC---------AT-A--TA
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             4594 12 +     60246 ACT---T---ATC---------AT-A--TA
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 8082 12 +    109717 ACT---T---ATC---------AT-A--TA
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               12456 12 +     16540 ACT---T---ATC---------AT-A--TA
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                12733 12 +     27497 ACT---T---ATC---------AT-A--TA
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           15194 12 +     26808 ACT---T---ATC---------TT-A--TA
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                29922 12 +     46535 ACT---T---ATC---------AT-A--TA
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              12645 12 -     29447 ACT---T---ATC---------AT-A--TA
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129889657 12 - 159252932 act---c---ttc---------at-a--ta
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129276731 12 - 158578461 act---c---ttc---------at-a--ta
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 17866 12 +     52776 ACT---C---TTC---------AT-A--TA
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13889856  9 -  19261668 act---t---a------------t-a--tt
i Fukomys_damarensis.KN123630.1                         C 0 I 1
s Galago_moholi.ctg555                                     207806 12 -    847004 ACT---T---ACC---------AT-G--TA
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           10186 12 -     43889 ACT---T---ACC---------AT-G--TA
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           7238 12 +     27357 CCT---T---ACC---------AT-G--TA
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               153122 12 +    324696 GCT---T---ATC---------AT-A--TA
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    178316 12 -    189561 ATT---T---GTC---------AT-A--TA
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                            9523  9 -     18683 ATT---A---A------------C-A--CA
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               1985 12 -     14630 ACT---T---ATT---------AT-A--TA
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119649083 12 - 195582420 ACT---T---ATT---------AT-A--TA
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   74077  9 +    118900 ACT---A---A------------C-A--CA
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                         2411 12 +      3980 ACT---T---ATC---------AT-A--TG
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             24891 12 +     26611 ACT---T---ATC---------AT-A--TG
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             2345 12 +     56096 ACT---T---ATC---------AT-A--TG
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        25618 12 -     42470 ACT---T---ATC---------AT-A--TG
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        42215 12 -     54384 ACT---T---ATC---------AT-A--TG
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              13910 12 +     53719 ACT---T---ATT---------AT-A--TA
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                24802 12 -     91191 ATT---T---GTC---------AT-A--TA
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2547997  9 +  31725842 act---t---a------------t-a--tt
i Heterocephalus_glaber.JH602058.1                      C 0 I 12
s Heterohyrax_brucei.HetBruBak_scaffold_25354               53383 14 +     73687 ATT---T---GCC---------AT-ATGTA
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              144382 12 +    277961 ATT---T---ATC---------AT-A--TA
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      275816  8 -    477199 ----------TTT---------at-g--ga
i Hipposideros_armiger.JXIK01001085.1                   C 0 I 1
s Hipposideros_galeritus.HipGal_scaffold_104691              4971  8 -      9143 ----------GTT---------AT-G--TA
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 I 1
s Hoolock_leuconedys.ctg649                                    98655 12 +    115816 ACT---T---ATT---------AT-A--TA
i Hoolock_leuconedys.ctg649                                C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 12979 12 -     67322 ACT---T---ATC---------AT-A--AT
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hylobates_abbotti.k141_493872                              1792 12 +      5897 ACT---T---ATT---------AT-A--TA
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_282275                               1006 12 +      1846 ACT---T---ATT---------AT-A--TA
i Hylobates_agilis.k141_282275                          C 0 I 44
s Hylobates_klossii.k141_466549                              8250 12 +     11537 ACT---T---ATT---------AT-A--TA
i Hylobates_klossii.k141_466549                         I 4 I 115
s Hylobates_muelleri.k141_1133650                            1227 12 -      2775 ACT---T---ATT---------AT-A--TA
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             29829 12 -     60944 ACT---T---ATT---------AT-A--TA
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     2951  9 +     22540 ACT---T---A------------C-A--TT
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7122743  5 +  13083262 ----------A------------T-A--CA
i Ictidomys_tridecemlineatus.JH393315.1                 I 4 C 0
s Indri_indri.k141_3334527                                   8860 12 +      9207 ACT---T---ATC---------AT-A--TA
i Indri_indri.k141_3334527                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               6059 12 +     17520 ATT---T---GTC---------AC-A--TA
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               20891 12 +     37189 ATT---T---GTC---------AC-A--TA
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          46854 12 -    147782 ACT---T---ATC---------GT-A--TA
i Lagothrix_lagothricha.k141_12968                      C 0 I 1
s Lasiurus_borealis.LasBor_scaffold_5102                   110996 12 -    115756 ATT---T---GTCA---------T-A--TA
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258403897 12 - 285822530 ACT---T---ATC---------AT-A--TA
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        20795 12 +     39228 ACT---T---ATC---------AT-A--TA
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            50169 12 +     63517 ACT---T---ATC---------AT-A--TA
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        75391 12 +    116806 ACT---T---ATC---------AT-A--TA
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     28432 12 -     33031 ACT---T---ATC---------AT-A--TA
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3082678 12 -   3498232 ACT---T---GTC---------AT-A--TA
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                     9891 10 +     22452 GCC---T---AC-----------T-C--TG
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            133234 12 +   3060487 ATT---T---GTC---------AC-A--TA
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19244496 12 +  19376315 ACT---T---ATT---------AT-A--TA
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            7537 12 +     84689 ACT---C---ACC---------AT-G--TA
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3775288 12 +   6799190 ACT---C---ACC---------AT-G--TA
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20588150 12 -  62548349 ACT---T---GTC---------AC-A--TA
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11084031 12 +  39895028 GCT---T---Atc---------at-a--ta
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             16179 12 +     74745 ACT---T---ATT---------AC-A--TA
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12702685 12 +  12821369 ACT---T---ATT---------AC-A--TA
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               4781 12 +      6569 ACT---T---ATT---------AC-A--TA
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           43082 12 +     63263 ACT---T---ATT---------AC-A--TA
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_1068107                               11658 12 +     12679 ACT---T---ATT---------AC-A--TA
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                1231 12 +      3017 ACT---T---ATT---------AC-A--TA
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  42843 12 -     79256 ACT---T---ATT---------AC-A--TA
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196031761 12 + 196197964 ACT---T---ATT---------AC-A--TA
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11441867 12 +  11645122 ACT---T---ATT---------AC-A--TA
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   1790 12 -     46448 ACT---T---ATT---------AC-A--TA
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                1620 12 -      3617 ACT---T---ATT---------AC-A--TA
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 11953 12 -     55006 ACT---T---ATT---------AC-A--TA
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43836990 12 +  43892939 ACT---T---ATT---------AC-A--TA
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                4213 12 -      5978 ACT---T---ATT---------AC-A--TA
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               1795 12 -     27140 ACT---T---ATT---------AC-A--TA
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43433656 12 -  43563597 ACT---T---ATT---------AT-A--TA
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4446482 12 -   4543643 ACT---T---ATT---------AT-A--TA
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            143295 12 +    252755 ACT---T---GTC---------AC-a--ta
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             33360 12 +     58827 ACT---T---GTC---------AC-A--TA
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36870590  5 +  64221397 ----------A------------T-A--CA
i Marmota_marmota.CZRN01000005.1                        I 4 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       61574 12 -    234502 ACT---T---GTC---------AT-A--TA
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_1828            225934 12 -    226874 CCT---T---GCC---------AT-G--TA
i Mellivora_capensis.MelCap_flattened_line_1828         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233                8504 12 +     15977 ATT---TAAAA------------T-A--TA
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1043311 11 -  26018355 gtt---t-aca------------t-a--ta
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_183284                    930 12 +      2166 ATT---T---GTC---------AC-A--TA
i Mesoplodon_bidens.MesBid_scaffold_183284              C 0 C 0
s Microcebus_murinus.CM007691.1                          16507014 12 +  47401472 att---t---atc---------at-a--ta
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  28335 12 -     48017 ACT---T---GTC---------AT-A--GA
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               19969 12 -     32043 ACT---T---CTC---------AT-A--TA
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22816195 12 -  98408828 ATT---TGCCA------------t-a--ta
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8206691 12 +  10048721 GCT---T---GTC--------G-T-A--TA
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            31372 12 +     45743 GCT---T---GTC--------G-T-A--TA
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        32311 12 +     34273 ACT---T---ATT---------AT-A--TA
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         7976 12 -    104932 ACT---T---GTC---------AT-A--TA
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     2427 12 +      8497 ATT---T---ATC---------AT-A--TA
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 143657 12 +    154973 ATT---T---GTC---------AC-A--TA
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                158505 12 +    265003 ACT---T---ACC---------AT-A--TA
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 1901 12 -      4346 ATT---T---GTC---------AT-A--TA
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  141600 12 -    168139 ACT---T---ATC---------AT-A--TA
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          16508 12 -    100666 ATT---T---GTCA---------T-G--TG
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70762042 12 +  92629107 ATT---TGCAG------------T-A--TA
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75485164 12 +  98207768 ATT---TGTAG------------T-A--TA
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67549482 12 +  89017189 ATT---TGCAG------------C-A--TA
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74324584 12 +  97876770 ATT---TGTAG------------T-A--TA
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              8036  9 +     98495 ATT---A---A------------C-A--CA
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4420829 12 -  28371801 CCT---T---GCC---------AT-A--TA
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     87001  4 -    117718 -----------------------C-A--TT
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 1 C 0
s Myotis_brandtii.KE161952.1                               964835 12 +   8389877 ATT---T---GTc--------a-t-g--tg
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5016512 12 +   6462685 ATT---T---GTCA---------T-A--TG
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3462421 12 -   3747815 Att---t---gtc--------a-t-g--tg
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         7610 12 +     66751 ATT---T---GTCA---------T-A--TG
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             2367 12 -      8794 ACT---T---GTC---------AC-T--TA
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nasalis_larvatus.k141_153429                               4692 12 +     48152 ACT---T---ATT---------AC-A--TA
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4481577 12 -  14209539 ACT---T---GTC---------AT-A--TA
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3948266 12 -   4490290 ATT---T---GTC---------AC-A--TA
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  46622 12 +     94413 ACT---T---GTC---------TT-A--TT
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1223136                          10461 12 -     11253 ATT---T---ATT---------AT-A--TA
i Nomascus_annamensis.k141_1223136                      C 0 C 0
s Nomascus_concolor.k141_468488                              1104 12 -      1482 ACT---T---ATT---------AT-A--TA
i Nomascus_concolor.k141_468488                         C 0 C 0
s Nomascus_gabriellae.k141_906566                            1093 12 -      2544 ACT---T---ATT---------AT-A--TA
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_1445                             269 13 -      7983 ACT---T---ATT---------ATAA--TA
i Nomascus_siki_b.tarseq_1445                       I 209 I 7656
s Nomascus_siki_a.k141_844529                                   841 12 +      2124 ACT---T---ATT---------AT-A--TA
i Nomascus_siki_a.k141_844529                             C 0 I 18
s Nyctereutes_procyonoides.CAJHUB010000786.1                27026 12 +   3668941 GCT---T---ATc---------at-a--ta
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65563867 12 -  95554990 ACT---T---ACC---------AT-G--TA
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                             712 12 +      6470 ACT---T---ACC---------AT-G--TA
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65666236 12 +  89412551 ACT---T---ACC---------AT-G--TA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4992571 10 -  23139505 GCC---c---ac-----------t-a--ta
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3676888  9 +  10294119 aat---t---a------------t-a--ta
i Octodon_degus.JH651621.1                              C 0 I 1038
s Odobenus_rosmarus.KB229369.1                             676235 12 -   3126709 ACT---T---GTC---------AT-A--TA
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1077024 12 +   1425656 ATT---T---GTC---------AT-A--TA
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         34188 12 +     78940 ATT---T---GTC---------AT-A--TA
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  121527 12 +    145789 GTT---TGCCA------------T-A--TA
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  33470 12 +     62360 ATT---TTTAA------------T-A--AA
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7221950 12 -   7562323 ATT---T---GTC---------AC-A--TA
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              40407 12 -     66828 ACT---T---GTC---------AT-A--TA
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141872540 10 + 163896628 GCC---T---AC-----------T-A--TA
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      304361 12 -    505867 GCT---T---ATc---------at-a--ta
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       35874 12 +     38679 ACT---T---ACC---------AT-G--TA
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18005315 12 -  38779656 ACT---T---ACC---------AT-G--TA
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134074604 12 - 275406953 ATT---T---GTC---------AT-A--TA
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      75818 12 +    140051 ATT---T---GTC---------AT-A--TA
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.AJFE02000950.1                                 456 12 -      1008 ACT---T---ATT---------AT-A--TA
i Pan_paniscus.AJFE02000950.1                           I 46 C 0
s Pan_troglodytes.KZ622857.1                               324309 12 +    772158 ACT---T---ATT---------AT-A--TA
i Pan_troglodytes.KZ622857.1                            I 46 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  30822 12 +    295523 ACT---C---TTC---------AT-A--TA
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3634426 12 +  18214204 act---c---ttc---------at-a--ta
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5024203 12 -   6340057 act---c---ttc---------at-a--ta
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1063462 12 -   1292953 ATT---T---GTC---------AT-G--TA
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188152440 12 - 188283584 ACT---T---ATT---------AT-A--TA
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            48652 12 +     76494 ACT---T---ATT---------AT-A--TA
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47509837 12 +  47705337 ACT---T---ATT---------AT-A--TA
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 63819 12 -    104429 ACT---T---ATT---------AT-A--TA
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  13605 12 -     29451 ACT---T---ATT---------AT-A--TA
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                34008 12 +     35859 ACT---T---ATT---------AT-A--TA
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    112156 12 -    135482 ACT---T---ATC---------AT-A--TA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           1935  9 -     23713 ACT---T---A------------T-G--TA
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            21232  9 -     27972 ACT---T---A------------T-G--TA
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      39840 12 -     45160 TCT---TGCCA------------C-A--TA
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4946644 12 -   8017169 att---tttaa------------t-a--ta
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            118567 12 -    122454 ATT---T---GTC---------AC-A--TA
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           1693 12 -      3310 ACT---T---ATT---------AC-G--TA
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       21599 12 -     82327 ACT---T---ATT---------AC-G--TA
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           18351 12 +     19957 ACT---T---ATT---------AC-G--TA
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26736360 12 +  26888534 ACT---T---ATT---------AC-G--TA
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            93608 12 +    112873 ATT---T---ATCA---------T-A--TA
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             40347 12 -     61926 ACT---T---ATC---------AT-A--TA
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        21776 12 +     78826 ACT---T---ATC---------AT-A--TA
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              5727 12 -     15800 ACT---T---ATC---------AT-A--TA
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                         8925 12 -     16101 ACT---T---ATC---------AT-A--TA
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          2234 12 +      9673 ACT---T---ATC---------AT-A--TA
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13471228 12 -  19735023 ACT---T---ATC---------AT-A--TA
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           10136 12 -     31692 ACT---T---ATC---------AT-A--TA
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           2634 12 +     21690 ATT---T---GTC---------AC-A--TA
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       19535 12 +     44506 ACT---T---ATC---------AT-A--CA
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        19753 12 +     67491 ACT---T---ATC---------AT-A--CA
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                       9998 12 -     98129 ACT---T---ATC---------AT-A--CA
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     19599 12 +    147771 ACT---T---ATC---------AT-A--CA
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        19849 12 -     23762 ACT---T---ATC---------AT-A--CA
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                           315 12 -     55515 ACT---T---ATC---------AT-A--CA
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         19668 12 +    152463 ACT---T---ATC---------AT-A--CA
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      6428 12 +      8943 ACT---T---ATC---------AT-A--CA
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                          9388 12 +    134592 ACT---T---ATC---------AT-A--CA
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          19978 12 -     75465 ACT---T---ATC---------AT-A--CA
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              183879 12 -    373494 ACT---T---ATT---------AT-A--TA
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19803783 12 +  19899266 ACT---T---ATT---------AT-A--TA
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               1930 12 -     15069 ACT---T---ATT---------AC-G--TA
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              2064 12 +     14865 ACT---T---ATT---------AC-G--TA
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                73247 14 +     78963 ATT---T---GCC---------AT-ATGTA
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6845271 12 +  12164890 ACT---T---ATC---------AT-A--TA
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     13739 12 -     30946 ACT---T---ATC---------AT-A--TA
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                          422 12 +     11805 ACT---T---ATC---------AT-A--TA
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           39753 12 +     52369 ACT---T---ATC---------AT-A--TA
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         32141 12 -     44753 ACT---T---ATC---------AT-A--TA
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            14063 12 +     27322 ACT---T---ATC---------AT-A--TA
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       13705 12 -     53241 ACT---T---ATC---------AT-A--TA
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         35977 12 -     48185 ACT---T---ATC---------AT-A--TA
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           30035 12 +     77221 att---taaaa------------t-a--ta
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            1172 12 -     27784 ACT---T---GTC---------AT-A--TA
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        242701 12 -    344369 GCT---T---GCC---------AT-A--TA
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13243300  5 -  17261082 ----------------------ac-a--ta
i Pteropus_alecto.KB031157.1                            I 4 C 0
s Pteropus_vampyrus.KN525959.1                             601254  5 -   3946241 ----------------------ac-a--ta
i Pteropus_vampyrus.KN525959.1                          I 4 C 0
s Puma_concolor.QAVW01000427.1                          131531017 12 - 161321710 act---c---ttc---------at-a--ta
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             26054 12 +     56732 ACT---T---ATT---------AC-G--TA
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6802544 12 +   6970761 ACT---T---ATT---------AC-G--TA
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             1936 12 +     18040 ACT---T---ATT---------AC-G--TA
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                13110 12 +     68503 ATT---T---GTC---------AT-A--TA
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13911408 13 +  90463843 CTT---TGCAG------------TCa--cg
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1784901 12 +   2252614 Ac----t--tgtt---------at-a--ta
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           12492 12 -     14454 ACT---T---ATT---------AC-G--TA
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206373818 12 - 206558726 ACT---T---ATT---------AC-G--TA
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44851466 12 -  45163003 ACT---T---ATT---------AC-G--TA
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                16599  4 +    109198 ACT---T-----------------------
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 I 5
s Saiga_tatarica.SaiTat_scaffold_82192                       4890 12 +     12214 ATT---T---GTC---------AT-A--TA
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15669436 12 -  43202129 AAG---T---ATC---------AT-A--CA
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        1302 12 +     34089 AAG---T---ATC---------AT-A--CA
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              1245 12 -     60842 AAG---T---ATC---------AT-A--CA
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              1322 12 +     67014 AAG---T---ATC---------AT-A--CA
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              1318 12 +     60816 AAG---T---ATC---------AT-A--CA
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 1255 12 -     76454 AAG---T---ATC---------AT-A--CA
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17337778 12 -  30362882 AAT---T---ATT---------AT-A--TA
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         17378 12 -     62485 AAT---T---ATT---------AT-A--TA
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   28654 12 -    114521 ATC---T---GAC---------AT-A--TT
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1527475                       24479 12 +     26421 ACT---T---ATT---------AC-G--TA
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       4940 12 +     20762 ACT---T---ATT---------AT-G--TA
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         38674 12 +     40653 ACT---T---ATT---------AC-G--TA
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                            9232 12 -     12194 ACT---T---ATT---------AT-G--TA
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     22652 12 -     27512 ACT---T---ATT---------AC-G--TA
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         31673 12 -     33692 ACT---T---ATT---------AC-G--TA
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   94705 12 -    120886 ATT---TGCAA------------A-A--TA
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            15162 12 +    739146 ACT---C---ACC---------AT-G--TA
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17747552 12 -  27805282 ACA---G---GTC---------AT-A--TA
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2236667  5 +   2842873 ----------a------------t-a--ca
i Spermophilus_dauricus.KZ294190.1                      I 4 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             231698 12 -    276980 ACT---T---GCC---------AT-A--TA
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            24267 12 +     62062 ACT---T---ATT---------AT-A--TA
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189269184  4 + 218635234 ----------ATC---------A-------
i Sus_scrofa.CM000824.4                                 C 0 I 2
s Symphalangus_syndactylus.tarseq_24                     13898626 12 +  13920577 ACT---T---ATT---------AT-A--TA
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               3105 21 -      6213 ATT---T---GTCACAAATTTTAT-G--TA
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               12040 12 +     45698 ACT---T---GTC---------AC-T--TA
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      804049  8 +   1148477 ACC---T---ATC---------A-------
i Tapirus_indicus.TapInd_scaffold_176                   C 0 I 2
s Tapirus_terrestris.TapTer_scaffold_14939                  54709  8 +     99546 ACC---T---ATC---------A-------
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 I 2
s Tarsius_lariang.k141_609102                               23380 12 +     42269 ACT---T---ATT---------GT-T--TA
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               56694 12 +     65473 ACT---T---ATT---------GT-T--TA
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194003976 12 - 194193292 ACT---T---ATT---------AT-A--TA
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                   893 12 +      6782 ACT---T---GTT---------AT-A--TA
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  133179 12 -    259118 ATT---T---CTC---------AT-A--TA
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        23050 12 +     38948 ACT---T---ATT---------AC-G--TA
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   16777 12 -     32910 ACT---T---ATT---------AC-G--TA
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       22675 12 +     24652 ACT---T---ATT---------AC-G--TA
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      1557  6 -      3559 ACT---T---AT------------------
i Trachypithecus_francoisi.k141_1178450                 C 0 I 2
s Trachypithecus_geei.k141_670367                           39499 12 -     54611 ACT---T---ATT---------AC-G--TA
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       15498 12 +     17312 ACT---T---ATT---------AC-G--TA
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    22865  6 -     25040 ACT---T---AT------------------
i Trachypithecus_hatinhensis.k141_357672                C 0 I 2
s Trachypithecus_laotum.k141_171445                          1531  6 +      3528 ACT---T---AT------------------
i Trachypithecus_laotum.k141_171445                     C 0 I 2
s Trachypithecus_leucocephalus.k141_283605                  47893  6 +     51589 ACT---T---AT------------------
i Trachypithecus_leucocephalus.k141_283605              C 0 I 2
s Trachypithecus_melamera.k141_238507                       11064 12 +     14732 ACT---T---ATT---------AC-G--TA
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       1542 12 -     28054 ACT---T---ATT---------AC-G--TA
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44656337 12 -  44834318 ACT---T---ATT---------AC-G--TA
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        1347 12 +      3372 ACT---T---ATT---------AC-G--TA
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   2529  9 +     90398 ------T---GTC---------AT-A--TA
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16078633 12 +  31416278 ACT---T---GTC---------At-c--ta
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2788481 12 -   3938065 ACT---T---ACC---------AT-G--TA
i Tupaia_chinensis.KB320831.1                           C 0 I 24
s Tupaia_tana.TupTan_flattened_line_68454                    1042 12 +     13056 ACT---T---ATC---------AC-A--TA
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69310668 12 -  96451834 ATT---T---GTC---------AC-A--TA
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 23851 12 -     25548 ACC---T---GTC---------AT-G--TA
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6511285 12 +  28682327 AGT---T---GTC---------GT-A--TA
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Vicugna_pacos.KN269600.1                                1521980  9 -   2331223 ------T---GTC---------AA-C--TA
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                134434  9 -    281493 ------T---ATC---------AT-A--TA
i Vulpes_lagopus.VulLag_flattened_line_2045             I 3 C 0
s Xerus_inauris.XerIna_scaffold_7898                       123760  5 -    134049 ----------A------------T-A--TA
i Xerus_inauris.XerIna_scaffold_7898                    I 4 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        210962 10 -    227762 --T---T---GTC---------AT-A--TA
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           4171 12 -      8775 ATT---T---GTC---------AC-A--TA
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16291  1 -    119109 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     12283  2 -     20485 I
e Jaculus_jaculus.JH725517.1                              8561873  2 +  11848649 I
e Allactaga_bullata.AllBul_scaffold_70162                    8911  2 -     22067 I
e Varecia_variegata.k141_775891                             21745  0 -     33872 C
e Varecia_rubra.k141_432109                                  2200  0 -     20643 C
e Nannospalax_galili.KL201303.1                            107449  0 +    362372 C
e Dolichotis_patagonum.DolPat_scaffold_14102                33375  0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             56104 16 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                14631 16 +     26546 I
e Cavia_tschudii.CavTsc_scaffold_488                       173989  0 +    436027 C
e Cavia_porcellus.DS562889.1                             15795798  0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15783848 16 -  24422027 I

a score=0.000000
s hg38.chr4_GL000008v2_random                                8602 18 +    209709 C-T-TT-AG-------C----T-T-TT---T--AG-C--CC---T
s Acinonyx_jubatus.LLWD01000356.1                         2030689 17 +   3721120 t-t-tt-ag-------c----t-t-tt---t--ag-c--C----T
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    108968 14 -    189883 T-T-TT-AGGGGTAT-T----T-----------------------
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 I 9
s Ailuropoda_melanoleuca.LNAT01000321.1                  10654022 17 +  23371972 T-T-TT-ag-------c----t-t-tt---t--ag-t--c----t
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7090726 17 -  16596857 T-T-CT-ag-------a----t-t-tt---t--ag-a--c----t
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allenopithecus_nigroviridis.k141_3103707                  59624 18 +     61638 C-T-TT-AG-------C----T-T-TT---C--AG-T--CC---T
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        51432 18 +     53391 C-T-TT-AG-------C----T-T-TT---C--AG-T--CC---T
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         2156 18 +     72529 C-T-TT-AG-------C----T-T-TT---C--AG-T--CC---T
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          1732 18 +      3797 C-T-TT-AG-------C----T-T-TT---C--AG-T--CC---T
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             6913 16 -     18050 ----TT-TA-------G----T-T-TT---T--AG-C--CC---T
i Alouatta_belzebul.k141_1818029                        I 1 C 0
s Alouatta_caraya.k141_5460                                  8029 16 -     11521 ----TT-AG-------C----T-T-TT---T--AG-C--CC---T
i Alouatta_caraya.k141_5460                             I 2 C 0
s Alouatta_discolor.k141_811576                              7590 16 -     21359 ----TT-TA-------G----T-T-TT---T--AG-C--CC---T
i Alouatta_discolor.k141_811576                         I 1 C 0
s Alouatta_juara.k141_1856473                                5972 16 +      7227 ----TT-AG-------C----T-T-TT---T--AG-C--CC---T
i Alouatta_juara.k141_1856473                           I 2 C 0
s Alouatta_macconnelli.k141_1331706                          6886 16 -     10438 ----TT-AG-------C----T-T-TT---T--AG-C--CC---T
i Alouatta_macconnelli.k141_1331706                     I 2 C 0
s Alouatta_nigerrima.k141_2718643                            3541 16 +      7047 ----TT-AG-------C----T-T-TT---T--AG-C--CC---T
i Alouatta_nigerrima.k141_2718643                       I 2 C 0
s Alouatta_palliata.k141_1316127                             6828 16 +     10410 ----TT-AG-------C----T-T-TT---T--AG-C--CC---T
i Alouatta_palliata.k141_1316127                        I 2 C 0
s Alouatta_puruensis.k141_1284840                             626 16 -      4927 ----TT-AG-------C----T-T-TT---T--AG-C--CC---T
i Alouatta_puruensis.k141_1284840                       I 2 C 0
s Alouatta_seniculus.k141_990213                             3559 16 +      6429 ----TT-AG-------C----T-T-TT---T--AG-C--CC---T
i Alouatta_seniculus.k141_990213                        I 2 C 0
s Ammotragus_lervia.NIVO01013474.1                        3517445 14 +   4113121 T-T-TC-AG-------C----T-A-TT---T--AG----------
i Ammotragus_lervia.NIVO01013474.1                      C 0 I 5
s Anoura_caudifer.AnoCau_scaffold_422                      387639 19 -    631301 T-T-TT-AG-------A----T-T-TT---T--AG-T--TT--TA
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            28078 14 +     33004 T-T-TC-AG-------C----A-A-TT---T--AG----------
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 I 5
s Aotus_azarae.k141_3170768                                 59271 18 +     78111 C-T-TT-AG-------C----C-T-TT---T--AG-C--CC---T
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            2201 18 +     22701 C-T-TT-GG-------C----C-T-TT---T--AG-C--CC---T
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5746159 18 +   9889416 C-T-TT-AG-------C----C-T-TT---T--AG-C--CC---T
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             2740 18 -    104377 C-T-TT-AG-------C----C-T-TT---T--AG-C--CC---T
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               2749 18 +     23246 C-T-TT-AG-------C----C-T-TT---T--AG-C--CC---T
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                      626 18 +      5067 T-T-TT-AG-------C----T-T-TT---T--AT-C--CA---T
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      14761 18 +     17483 T-T-TT-AG-------C----T-T-TT---C--TA-C--CC---T
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 5781 19 -     29036 T-T-TT-AG-------A----T-T-TT---C--AG-T--TT--TA
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9536014 16 +  39197703 ----TT-AG-------C----T-T-TT---T--AG-C--CC---T
i Ateles_geoffroyi_b.tarseq_2582                           I 1 C 0
s Ateles_belzebuth.k141_1348307                             57298 16 +     85812 ----TT-AG-------C----T-T-TT---T--AG-C--CC---T
i Ateles_belzebuth.k141_1348307                         I 1 C 0
s Ateles_chamek.k141_1072810                                 8297 16 +     89302 ----TT-AG-------C----T-T-TT---T--AG-C--CC---T
i Ateles_chamek.k141_1072810                            I 1 C 0
s Ateles_geoffroyi_a.k141_1300742                             12807 16 -     58268 ----TT-AG-------C----T-T-TT---T--AG-C--CC---T
i Ateles_geoffroyi_a.k141_1300742                         I 1 C 0
s Ateles_marginatus.k141_899112                             60793 16 +    119057 ----TT-AG-------C----T-T-TT---T--AG-C--CC---T
i Ateles_marginatus.k141_899112                         I 1 C 0
s Ateles_paniscus.k141_1631200                               2744 16 -     25888 ----TT-AG-------C----T-T-TT---T--AG-C--CC---T
i Ateles_paniscus.k141_1631200                          I 1 C 0
s Avahi_laniger.k141_2840928                                 3505 18 -     16375 T-T-TT-AG-------C----T-T-TT---C--TG-C--CC---T
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_767228                               9454 18 -      9688 T-T-TT-AG-------C----T-T-TT---C--TG-C--CC---T
i Avahi_peyrierasi.k141_767228                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26377398 14 +  51448160 T-T-TC-AG-------C----T-T-TT---T--Ag----------
i Balaenoptera_acutorostrata.KI537095.1                 C 0 I 6
s Balaenoptera_bonaerensis.DF502048.1                        2629 14 -     13118 T-T-TC-AG-------C----T-T-TT---T--AG----------
i Balaenoptera_bonaerensis.DF502048.1                   C 0 I 6
s Beatragus_hunteri.BeaHun_scaffold_21644                   40545 14 -     72089 T-T-TC-AG-------C----T-A-TT---T--AG----------
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 I 5
s Bison_bison.KN264915.1                                  6556689 14 +   6870073 T-T-TC-AG-------C----T-A-TT---T--AG----------
i Bison_bison.KN264915.1                                C 0 I 5
s Bos_indicus.CM003021.1                                138136923 14 - 161108492 T-T-TC-NG-------C----T-A-TT---T--AG----------
i Bos_indicus.CM003021.1                                C 0 I 5
s Bos_mutus.JH883513.1                                     569301 14 -    998990 T-T-TC-AG-------C----T-A-TT---T--AG----------
i Bos_mutus.JH883513.1                                  C 0 I 5
s Bos_taurus.CM000177.6                                 136292656 14 - 158972876 T-T-TC-AG-------C----T-A-TT---T--AG----------
i Bos_taurus.CM000177.6                                 C 0 I 5
s Bubalus_bubalis.KI419065.1                              1228277 14 -   1914593 T-T-TC-AG-------C----T-A-TT---T--AG----------
i Bubalus_bubalis.KI419065.1                            C 0 I 5
s Cacajao_ayresi.k141_724503                               110646 18 -    171031 C-C-TT-AG-------C----A-T-TT---T--AA-C--CC---T
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                  9672 18 +    125063 C-C-TT-AG-------C----A-T-TT---T--AA-C--CC---T
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                11720 18 -    216513 C-C-TT-AG-------C----A-T-TT---T--AA-C--CC---T
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        4260 18 -    134917 C-C-TT-AG-------C----A-T-TT---T--AA-C--CC---T
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3216908 19 -   8989139 t-t-tc-ag-------t----t-t-tt---t--ag-t--CT--TT
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           394609 19 -  15254737 t-t-tc-ag-------t----t-t-tt---t--ag-t--CT--TT
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2970346 19 +   6889770 t-t-tc-ag-------t----t-t-tt---t--ag-t--CT--TT
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11515399 18 +  39901454 T-T-TC-AG-------T----T-T-TT---TT-AG-T--C----T
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   10416 18 +     87036 T-T-TC-AG-------T----T-T-TT---TT-AG-T--C----T
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11262058 18 -  35597290 t-t-tc-ag-------t----t-t-tt---t-tag-t--c----t
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11084587 18 +  39895921 t-t-tc-ag-------t----t-t-tt---t-tag-t--c----t
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16451621 18 -  44759192 t-t-tc-ag-------t----t-t-tt---t-tag-t--c----t
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21322552 14 + 157394656 T-T-TC-AG-------C----T-A-TT---T--AG----------
i Capra_aegagrus.CM003214.1                             C 0 I 5
s Capra_hircus.CM004562.1                               135703779 14 - 157403528 T-T-TC-AG-------C----T-A-TT---T--AG----------
i Capra_hircus.CM004562.1                               C 0 I 5
s Capromys_pilorides.CapPil_scaffold_647363                  1317 19 +      1887 G-TCTT-AG-------A----T-T-TT---T--AG-G--CA---C
i Capromys_pilorides.CapPil_scaffold_647363             C 0 C 0
s Carlito_syrichta.NW_007248099.1                          305901 18 +    345090 t-t-tt-aa-------c----t-t-tt---a--aa-c--ct---T
i Carlito_syrichta.NW_007248099.1                       C 0 I 9
s Carollia_perspicillata.CarPer_scaffold_4436               56820 19 +     67245 T-T-TT-AG-------A----T-T-TT---T--AG-T--TT--TA
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   27322 18 +     33760 T-T-TT-AG-------A----C-T-TT---T--AG-T--CA---T
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   156121 14 -    276539 T-T-TC-AG-------C----T-T-TT---T--AG----------
i Catagonus_wagneri.CatWag_scaffold_1305                I 2 C 0
s Cebus_albifrons.Contig22                               18887486 18 -  29618158 C-T-TT-AG-------C----T-T-TC---T--AG-C--CC---T
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 5030 18 -     26817 C-T-TT-AG-------C----T-T-TC---T--AG-C--CC---T
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                 9273 18 +     25043 C-T-TT-AG-------C----T-T-TC---T--AG-C--CC---T
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         4943 18 +     21754 T-T-TT-AA-------C----T-T-TT---A--AG-C--CT---T
i Cephalopachus_bancanus.k141_702587                    I 2 I 9
s Ceratotherium_simum.JH767818.1                          4360608 17 +   7569818 t-t-tt-ag-------a----t-t-tt---t--ag-t--c----t
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623          363 17 -      9338 T-T-TT-AG-------A----T-T-TT---T--AG-T--C----T
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6551420 18 +   6739814 C-C-TT-AG-------C----T-T-TT---C--AG-T--CC---T
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      52897 18 -     54931 C-C-TT-AG-------C----T-T-TT---C--AG-T--CC---T
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         17881 18 -     19697 C-C-TT-AG-------C----T-T-TT---C--AG-T--CC---T
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         55412 18 -    107033 C-C-TT-AG-------C----T-T-TT---C--AG-T--CC---T
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        1853 18 -      3853 C-T-TC-AG-------C----T-T-TT---C--AG-T--CC---T
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          25786 18 +     30494 C-T-TC-AG-------C----T-T-TT---C--AG-T--CC---T
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           1810 18 -      4022 C-T-TT-AG-------C----T-T-TT---C--AT-T--CC---T
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          1703 18 -      3505 C-T-TT-AG-------C----T-T-TT---C--AG-T--CC---T
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           20507 18 +     35983 C-T-TT-AG-------C----T-T-TT---C--AG-T--CC---T
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11987029 18 +  12117833 C-T-TC-AG-------C----T-T-TT---C--AG-T--CC---T
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46473782 18 +  46592721 C-T-TT-AG-------C----T-T-TT---C--AG-T--CC---T
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      31609 18 +     33420 C-T-TT-AG-------C----T-T-TT---C--AG-T--CC---T
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        1645 18 -      3443 C-T-TC-AG-------C----T-T-TT---C--AG-T--CC---T
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      2636 18 -      4669 C-T-TC-AG-------C----T-T-TT---C--AG-T--CC---T
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        2436 18 -      4411 C-T-TT-AG-------C----T-T-TT---C--AG-T--CC---T
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         1961 18 -      4205 C-T-TT-AG-------C----T-T-TT---C--AT-T--CC---T
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_1070855           179 21 -      1715 T-T-TT-AG-------C----T-T-TT---T--TA-G--TCTTTA
i Chaetophractus_vellerosus.ChaVel_scaffold_1070855     C 0 C 0
s Cheirogaleus_major.k141_1157592                           55807 18 -     68416 T-T-TT-AG-------T----T-T-TT---C--TG-C--CC---T
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            4856 18 +     13308 T-T-TT-AG-------T----T-T-CT---C--TG-C--CT---T
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             2289 18 -     18223 T-T-TT-AG-------C----T-T-TT---T--AA-C--CC---T
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             19312 18 +     25473 T-T-TT-AG-------C----T-T-TT---T--AA-C--CC---T
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           38351 18 +     57117 T-T-TT-AG-------C----T-T-TT---T--AA-C--CC---T
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          43026 18 +     54541 T-T-TT-AG-------C----T-T-TT---T--AA-C--CC---T
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15958689 19 +  43084221 t-tctt-at-------c----G-T-TT---T--AG-T--CA---C
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         67867 18 +    196370 C-C-TT-AG-------C----A-T-TT---T--AA-C--CC---T
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          12048 18 +     40510 C-C-TT-AG-------C----A-T-TT---T--AA-C--CC---T
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15135242 18 -  15256731 C-T-TT-AG-------C----T-T-TT---C--AG-T--CC---T
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      30288 18 -     53260 C-T-TT-AG-------C----T-T-TT---C--AG-T--CC---T
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101140737 18 + 101219884 C-T-TT-AG-------C----T-T-TT---C--AG-T--CC---T
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                13802 17 -     21363 T-T-TC-AG-------G----T-T-TA---T--TA-G--TC----
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 I 3
s Choloepus_hoffmanni.KN194586.1                           759108 17 +    964067 T-T-TC-AG-------G----T-T-TA---T--TA-G--TC----
i Choloepus_hoffmanni.KN194586.1                        C 0 I 3
s Chrysochloris_asiatica.ChrAsi_scaffold_141308              5897 17 -     12508 T-G-TG-TG-------C----T-TTT----T--TA-T--TC----
i Chrysochloris_asiatica.ChrAsi_scaffold_141308         C 0 I 2
s Colobus_angolensis.KN985967.1                          10879316 18 +  10971483 C-T-TT-AG-------C----T-T-TT---C--AG-C--CC---T
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147660474 18 + 156195979 C-T-TT-AG-------C----T-T-TT---C--AG-C--CC---T
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            12460 18 +     23629 C-T-TT-AG-------C----T-T-TT---C--AG-C--CC---T
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60610071 11 +  78930452 t-t-tt-ag-------c----t-t-tt------------------
i Condylura_cristata.JH655880.1                         C 0 I 7
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         36529 19 -     40477 C-T-TG-AG-------C----T-T-TT---T--AG-T--CG--TT
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 I 4
s Cricetomys_gambianus.CriGam_scaffold_949                 274411 23 -    399297 T-A--T-AGGGGT-ACA----T-T-TT---C--AA-A--TA---T
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53025591 24 +  72327488 a-t-tt-a--aagtatt----ttt-tt---c--ag-a--ta---t
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             16057 10 -     19186 -------TG-------T----C-T-TT---A---G-T--------
i Crocidura_indochinensis.CroInd_scaffold_38409         I 2 I 2
s Cryptoprocta_ferox.CryFer_flattened_line_19014            48717 17 -     70449 T-T-TT-AC-------C----T-T-TT---T--AG-A--C----T
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 I 11
s Ctenodactylus_gundi.CteGun_scaffold_447                  205124 18 -    956709 T-T-TT-AG-------C----T-T-TT---G--AG-T--CA---A
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 27385 19 -     67205 T-TCTT-AC-------A----T-T-TT---T--AG-T--CA---C
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          178989 22 -   6883506 t-t-tt-ag-------c----t-t-tt--ct--ca-g--TCTTTA
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16841681 18 +  31942871 T-T-TT-AG-------C----T-T-TT---C--TG-C--CC---T
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80034144 14 -  96802777 T-T-TC-AG-------C----T-T-TT---t--ag----------
i Delphinapterus_leucas.KZ290064.1                      C 0 I 6
s Desmodus_rotundus.KZ672188.1                           18696133 19 -  18957592 t-t-tt-ag-------a----t-t-tt---t--ag-t--tt--ta
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 319270 17 +    993696 t-t-tt-ag-------a----t-t-tt---t--ag-t--C----T
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_170113                  528 17 +       818 T-T-TT-AG-------A----T-T-TT---T--AG-T--C----T
i Diceros_bicornis.DicBicMic_scaffold_170113            C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   154554 19 +    228994 T-TCCT-AT-------A----T-T-TT---T--AG-C--CA---C
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3652309 18 +   4240102 t-t-tt-ag-------a----t-t-tt---t--ag-t--cA---T
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 23863 18 +     28912 T-T-TT-AG-------A----T-T-TT---T--AG-T--CA---T
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Echinops_telfairi.JH980316.1                           22991401 18 -  44670279 C-T-tt-ag-------c----t-ttt----a-aaa-t--tc----
i Echinops_telfairi.JH980316.1                          C 0 I 5
s Eidolon_helvum.KE772537.1                                  9509 19 +     24177 t-t-tt-gc-------c----t-t-tt---t--ag-t--ct--tt
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1488814 12 +   1727528 ----TC-AG-------C----T-A-TT---T--AG----------
i Elaphurus_davidianus.JRFZ01086400.1                   I 1 I 5
s Elephantulus_edwardii.JH947210.1                        7803568 17 +  15467074 C-C-tt-ag-------c----t-ttt----t--ta-t--ta----
i Elephantulus_edwardii.JH947210.1                      C 0 I 2
s Ellobius_lutescens.LOEQ01003611.1                        236060 13 -    369425 t-t-tt-ag-ggttttt----------------------------
i Ellobius_lutescens.LOEQ01003611.1                     C 0 I 10
s Ellobius_talpinus.LOJH01090055.1                           3067 24 -      7838 t-t-tt-at--ggtttt----ttc-tT---C--AA-G--TA---T
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85868448 17 +  99434291 T-T-TT-Ag-------c----t-t-tt---t--ag-t--c----t
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Equus_asinus.JREZ01000062.1                             5849999 17 -   7175178 T-T-TT-AG-------C----T-T-TT---T--AG-T--C----T
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13348502 17 +  41866177 T-T-TT-AG-------C----T-T-TT---T--AG-T--C----T
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                           9992 17 +     92910 T-T-TT-AG-------C----T-T-TT---T--AG-T--C----T
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11529588 17 +  16010500 t-t-ttcag-------t----t-t-tt---a--ag-t--C-----
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48767421 18 -  48907691 C-T-TT-AG-------C----T-T-TT---C--AG-T--CC---T
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          312282 14 +    330699 T-T-TC-AG-------C----T-T-TT---T--AG----------
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 I 6
s Eubalaena_japonica.EubJap_flattened_line_7756             58711 14 +     89355 T-T-TC-AG-------C----T-T-TT---T--AG----------
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 I 6
s Eulemur_albifrons.k141_715837                              1882 18 +     13586 T-T-TT-AG-------C----T-T-TT---C--TG-T--CC---T
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               1818 18 -      6809 T-T-TT-AG-------C----T-T-TT---C--TG-C--CC---T
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             8290 18 +     36558 T-T-TT-AG-------C----T-T-TT---C--TG-C--CC---T
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             4606 18 +     60246 T-T-TT-AG-------C----T-T-TT---C--TG-C--CC---T
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 8094 18 +    109717 T-T-TT-AG-------C----T-T-TT---C--TG-C--CC---T
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               12468 18 +     16540 T-T-TT-AG-------C----T-T-TT---C--TG-C--CC---T
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                12745 18 +     27497 T-T-TT-AG-------C----T-T-TT---C--TG-C--CC---T
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           15206 18 +     26808 T-T-TT-AG-------C----T-T-TT---C--TG-C--CC---T
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                29934 18 +     46535 T-T-TT-AG-------C----T-T-TT---C--TG-C--CC---T
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              12657 18 -     29447 T-T-TT-AG-------C----T-T-TT---C--TG-C--CC---T
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129889669 17 - 159252932 t-t-tt-ag-------c----t-t-tt---t--ag-C--C----T
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129276743 17 - 158578461 t-t-tt-ag-------c----t-t-tt---t--ag-c--C----A
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 17878 17 +     52776 T-T-TT-AG-------C----T-T-TT---T--AG-C--C----T
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13889866  7 -  19261668 ------------------------------t--ag-t--ca---c
i Fukomys_damarensis.KN123630.1                         I 1 C 0
s Galago_moholi.ctg555                                     207818 18 -    847004 T-T-TT-AG-------C----T-T-TT---C--TA-C--CC---C
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           10198 18 -     43889 T-T-TT-AG-------C----T-T-TT---C--TA-C--CC---C
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           7250 18 +     27357 G-T-TT-AG-------C----T-T-TT---C--TA-C--CC---T
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               153134 18 +    324696 T-T-TT-AG-------C----T-T-TT---T--GG-T--CT---T
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    178328 14 -    189561 T-T-TC-AG-------C----T-A-TT---T--AG----------
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 I 5
s Glis_glis.GliGli_scaffold_79770                            9532 18 -     18683 T-T-TG-AG-------T----T-T-TT---T--AG-T--TA---T
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               1997 18 -     14630 C-T-TC-AG-------C----T-T-TT---T--AG-C--CC---T
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119649095 18 - 195582420 C-T-TC-AG-------C----T-T-TT---T--AG-C--CC---T
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   74086 19 +    118900 T-T-TG-TG-------T----T-TTTT---T--AG-T--TA---T
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                         2423 18 +      3980 T-T-TT-AG-------C----T-T-TT---C--TG-C--CC---T
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             24903 18 +     26611 T-T-TT-AG-------C----T-T-TT---C--TG-C--CC---T
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             2357 18 +     56096 T-T-TT-AG-------C----T-T-TT---C--TG-C--CC---T
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        25630 18 -     42470 T-T-TT-AG-------C----T-T-TT---C--TG-C--CC---T
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        42227 18 -     54384 T-T-TT-AG-------C----T-T-TT---C--TG-C--CC---T
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              13922 17 +     53719 T-T-TT-GC-------C----T-T-TT---T--AG-C--C----T
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                24814 14 -     91191 T-T-TC-AG-------C----T-A-TT---T--AG----------
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 I 5
s Heterocephalus_glaber.JH602058.1                        2548018  7 +  31725842 ------------------------------t--ag-t--CA---C
i Heterocephalus_glaber.JH602058.1                      I 12 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               53397 22 +     73687 T-C-TT-AG-------T----T-T-C-TTTT--TAGCTCTT----
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 I 2
s Hippopotamus_amphibius.HipAmp_scaffold_1308              144394 14 +    277961 T-T-TC-AA-------C----T-T-TT---T--AG----------
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 I 4
s Hipposideros_armiger.JXIK01001085.1                      275825 19 -    477199 t-t-tt-at-------a----t-t-tt---t--ag-t--ct--tt
i Hipposideros_armiger.JXIK01001085.1                   I 1 I 8
s Hipposideros_galeritus.HipGal_scaffold_104691              4980 19 -      9143 T-T-TT-AG-------A----T-T-TC---T--AG-T--CT--TT
i Hipposideros_galeritus.HipGal_scaffold_104691         I 1 I 3
s Hoolock_leuconedys.ctg649                                    98667 18 +    115816 C-T-TT-AG-------C----T-T-TT---T--AG-C--CC---T
i Hoolock_leuconedys.ctg649                                C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 12991 17 -     67322 T-T-TT-AC-------C----T-T-TT---T--AG-A--C----T
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hylobates_abbotti.k141_493872                              1804 18 +      5897 C-T-TT-AG-------C----T-T-TT---T--AG-C--CC---T
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_961056                              21575 18 -     21634 C-T-TT-AG-------C----t-t-tt---t--ag-c--cc---t
i Hylobates_agilis.k141_961056                          I 58 n 44
s Hylobates_klossii.k141_584463                               181 18 -      1009 C-T-TT-AG-------C----T-T-TT---T--AA-C--CC---T
i Hylobates_klossii.k141_584463                         I 12 C 0
s Hylobates_muelleri.k141_1133650                            1239 18 -      2775 C-T-TT-AG-------C----T-T-TT---T--AG-C--CC---T
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             29841 18 -     60944 C-T-TT-AG-------C----T-T-TT---T--AG-C--CC---T
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     2960 19 +     22540 T-TCTT-AG-------T----T-T-CT---T--AG-T--CA---C
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7122748 18 +  13083262 T-T-TT-AG-------C----T-T-TT---C--AA-C--CA---T
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_3334527                                   8872 18 +      9207 T-T-TT-AG-------C----T-T-TT---C--TG-C--CT---T
i Indri_indri.k141_3334527                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               6071 14 +     17520 T-T-TC-AG-------C----T-T-TT---C--AG----------
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 I 6
s Kogia_breviceps.KogBre_flattened_line_35920               20903 14 +     37189 T-T-TC-AG-------C----A-T-TT---T--AG----------
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 I 6
s Lagothrix_lagothricha.k141_12968                          46867 16 -    147782 ----TT-AG-------C----T-T-TT---T--AG-C--CC---T
i Lagothrix_lagothricha.k141_12968                      I 1 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   111008 11 -    115756 T-T-TT-AG-------C----T-T-TT------------------
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 I 7
s Lemur_catta.scaffold_1                                258403909 18 - 285822530 T-T-TT-AG-------C----T-T-TT---C--TG-C--CC---T
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        20807 18 +     39228 T-T-TT-AG-------C----T-T-TT---C--TG-T--CC---T
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            50181 18 +     63517 T-T-TT-AG-------C----T-T-TT---C--TG-T--CC---T
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        75403 18 +    116806 T-T-TT-AG-------C----T-T-TT---C--TG-T--CC---T
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     28444 18 -     33031 T-T-TT-AG-------C----T-T-TT---C--TG-T--CC---T
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3082690 17 -   3498232 T-T-TT-AG-------C----T-T-TT---G--AG-T--C----T
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                     9901 12 +     22452 T-T-TG-AG-------A----C-T-TT---A--------------
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            133246 14 +   3060487 T-T-TC-AG-------C----T-T-TT---T--AG----------
i Lipotes_vexillifer.KE558548.1                         C 0 I 6
s Lophocebus_aterrimus.ctg55                             19244508 18 +  19376315 C-C-TT-AG-------C----T-T-TT---C--AG-T--CC---T
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            7549 18 +     84689 T-T-TT-AG-------C----T-T-TT---C--TA-C--CC---T
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3775300 18 +   6799190 T-T-TT-AG-------C----T-T-TT---C--TA-C--CC---T
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20588162 19 -  62548349 T-C-Tt-ag-------c----t-t-t-tttt--ta-t--tc----
i Loxodonta_africana.GL010040.1                         C 0 I 2
s Lycaon_pictus.CM007556.1                               11084043 18 +  39895028 t-t-tc-ag-------t----t-t-tt---t-tag-t--c----t
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             16191 18 +     74745 C-T-TT-AG-------C----T-T-TT---C--AG-T--CC---T
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12702697 18 +  12821369 C-T-TT-AG-------C----T-T-TT---C--AG-T--CC---T
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               4793 18 +      6569 C-T-TT-AG-------C----T-T-TT---C--AG-T--CC---T
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           43094 18 +     63263 C-T-TT-AG-------C----T-T-TT---C--AG-T--CC---T
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_1068107                               11670 18 +     12679 C-T-TT-AG-------C----T-T-TT---C--AG-T--CC---T
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                1243 18 +      3017 C-T-TT-AG-------C----T-T-TT---C--AG-T--CC---T
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  42855 18 -     79256 A-T-TT-AG-------C----T-T-TT---C--AG-T--CC---T
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196031773 18 + 196197964 C-T-TT-AG-------C----T-T-TT---C--AG-T--CC---T
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11441879 18 +  11645122 C-T-TT-AG-------C----T-T-TT---C--AG-T--CC---T
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   1802 18 -     46448 C-T-TT-AG-------C----T-T-TT---C--AG-T--CC---T
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                1632 18 -      3617 C-T-TT-AG-------C----T-T-TT---C--AG-T--CC---T
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 11965 18 -     55006 C-T-TT-AG-------C----T-T-TT---C--AG-T--CC---T
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43837002 18 +  43892939 C-T-TT-AG-------C----T-T-TT---C--AG-T--CC---T
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                4225 18 -      5978 C-T-TT-AG-------C----T-T-TT---C--AG-T--CC---T
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               1807 18 -     27140 C-T-TT-AG-------C----T-T-TT---C--AG-T--CC---T
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43433668 18 -  43563597 C-C-TT-AG-------C----T-T-TT---C--AG-T--CC---T
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4446494 18 -   4543643 C-C-TT-AG-------C----T-T-TT---C--AG-T--CC---T
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            143307 15 +    252755 t-t-tt-ag-------c----t-t-tt---t--aa-t--------
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             33372 17 +     58827 T-T-TT-AG-------c----t-t-tt---t--ag-t--c----t
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36870595 18 +  64221397 T-T-TT-AG-------C----T-T-TT---C--AA-C--CA---T
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       61586 15 -    234502 T-T-TT-AG-------T----T-T-GT---T--AG-T--------
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 I 1
s Mellivora_capensis.MelCap_flattened_line_1828            225946 17 -    226874 T-T-TT-AG-------C----T-T-TT---T--AG-T--C----T
i Mellivora_capensis.MelCap_flattened_line_1828         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233                8516 14 +     15977 T-T-TT-AGG-AGTATT----T-----------------------
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 I 9
s Mesocricetus_auratus.KB708139.1                         1043322 24 -  26018355 t-t-tt-gg-gagtatt----t-t-ta---a--ag-a--ta---t
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_183284                    942 14 +      2166 T-T-TC-AG-------C----T-T-AT---T--AG----------
i Mesoplodon_bidens.MesBid_scaffold_183284              C 0 I 6
s Microcebus_murinus.CM007691.1                          16507026 18 +  47401472 t-t-tt-ag-------c----t-t-tt---c--tg-c--cc---t
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  28347 18 -     48017 C-T-TT-AG-------C----T-TTT----G-AAA-T--TC----
i Microgale_talazaci.MicTal_scaffold_34660              C 0 I 2
s Micronycteris_hirsuta.MicHir_scaffold_37978               19981 19 -     32043 T-T-TT-AG-------A----T-T-TT---T--AG-T--TT--TG
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22816207 25 -  98408828 t-t-tt-ag-ggttttt----ttc-tt---c--aa-g--ta---t
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8206703 19 +  10048721 T-C-TT-ag-------c----t-t-tt---t--ag-t--ct--tt
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            31384 19 +     45743 T-C-TT-AG-------C----T-T-TT---T--AG-T--CT--TT
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        32323 18 +     34273 C-T-TT-AG-------C----T-T-TT---C--AG-T--CC---T
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         7988 17 -    104932 T-T-TT-AG-------C----T-T-TT---G--AG-T--C----T
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     2439 18 +      8497 T-T-TT-AG-------C----T-T-TT---C--TG-C--TC---C
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 143669 14 +    154973 T-T-TC-AG-------C----T-T-TT---T--AG----------
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 I 6
s Mormoops_blainvillei.MorMeg_scaffold_2952                158517 19 +    265003 T-T-TT-AG-------C----T-T-TT---T--AG-T--CT--TC
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 1913 14 -      4346 T-T-TC-AG-------C----T-A-TT---T--AG----------
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 I 5
s Mungos_mungo.MunMun_flattened_line_8729                  141612 16 -    168139 T-T-TT-GC-------C----T-T--T---T--AG-C--C----T
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          16520 11 -    100666 T-T-TT-AA-------C----T-T-TT------------------
i Murina_feae.MurFea_scaffold_2254                      C 0 I 6
s Mus_caroli.LT608236.1                                  70762054 24 +  92629107 T-T-TT-ACG-ggtatt----t-t-tt---c--aa-a--ta---a
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75485176 14 +  98207768 T-T-TT-AGG-ggcatt----t-----------------------
i Mus_musculus.chr16                                    C 0 I 9
s Mus_pahari.LT608305.1                                  67549494 24 +  89017189 T-T-TT-AGGG-gtatt----t-t-tt---c--aa-a--ta---c
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74324596 14 +  97876770 T-T-TT-AGG-ggcatt----t-----------------------
i Mus_spretus.CM004110.1                                C 0 I 9
s Muscardinus_avellanarius.MusAve_scaffold_9643              8045 12 +     98495 T-T-TG-AG-------T----T-T-TT---T--------------
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 I 2
s Mustela_putorius.JH417978.1                             4420841 17 -  28371801 T-T-TT-AG-------C----g-t-tt---t--ag-t--c----t
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     87005 19 -    117718 G-TCTT-AG-------A----T-T-TT---T--AG-T--CA---C
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               964847 11 +   8389877 t-t-tt-tg-------c----t-t-tt------------------
i Myotis_brandtii.KE161952.1                            C 0 I 6
s Myotis_davidii.KB114863.1                               5016524 11 +   6462685 t-t-tt-ag-------c----t-t-tt------------------
i Myotis_davidii.KB114863.1                             C 0 I 6
s Myotis_lucifugus.GL429887.1                             3462433 11 -   3747815 t-t-tt-tg-------c----t-t-tt------------------
i Myotis_lucifugus.GL429887.1                           C 0 I 6
s Myotis_myotis.MyoMyo_scaffold_6123                         7622 11 +     66751 T-T-TT-AG-------C----T-T-TT------------------
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 I 6
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             2379 21 -      8794 C-T-TT-AG-------A----T-T-TT---T--TA-G--TTTTTT
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 I 5
s Nasalis_larvatus.k141_153429                               4704 18 +     48152 C-T-TA-AG-------C----T-T-TT---C--AG-C--CC---T
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4481589 17 -  14209539 T-T-TT-AG-------C----T-T-TT---G--AG-T--C----T
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3948278 14 -   4490290 T-T-TC-AG-------C----T-T-TT---t--ag----------
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 I 6
s Noctilio_leporinus.NocLep_scaffold_12062                  46634 19 +     94413 T-T-TT-AG-------C----C-T-CT---T--AG-T--CT--TC
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1223136                          10473 18 -     11253 C-T-TT-AG-------C----T-T-TT---T--AG-C--CC---T
i Nomascus_annamensis.k141_1223136                      C 0 C 0
s Nomascus_concolor.k141_468488                              1116 18 -      1482 C-T-TT-AG-------C----T-T-TT---T--AG-C--CC---T
i Nomascus_concolor.k141_468488                         C 0 C 0
s Nomascus_gabriellae.k141_906566                            1105 18 -      2544 C-T-TT-AG-------C----T-T-TT---T--AG-C--CC---T
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             21579 18 -  18771707 C-T-TT-AG-------C----T-T-TT---T--AG-C--CC---T
i Nomascus_siki_b.tarseq_80                         I 12 C 0
s Nomascus_siki_a.k141_583075                                   128 18 -      1015 C-T-TT-AG-------C----T-T-TT---T--AG-C--CC---T
i Nomascus_siki_a.k141_583075                             n 18 n 18
s Nyctereutes_procyonoides.CAJHUB010000786.1                27038 18 +   3668941 t-t-tc-ag-------t----t-t-tt---t-tag-t--c----t
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65563879 18 -  95554990 T-T-TT-AG-------C----T-T-TT---C--TA-C--CC---T
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                             724 18 +      6470 T-T-TT-AG-------C----T-T-TT---C--TA-C--CC---T
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65666248 18 +  89412551 T-T-TT-AG-------C----T-T-TT---C--TA-C--CC---T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4992581 13 -  23139505 t-t-tc-aa-------a----a-tgtt---g--------------
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3677935 19 +  10294119 t-tttc-at-------a----t-a-tt---t--at-t--ca---c
i Octodon_degus.JH651621.1                              I 1038 I 166
s Odobenus_rosmarus.KB229369.1                             676247 17 -   3126709 T-T-TT-AG-------C----T-T-TT---G--AG-T--C----T
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1077036 14 +   1425656 T-T-TC-AG-------C----T-A-TT---T--AG----------
i Odocoileus_virginianus.KZ101650.1                     C 0 I 5
s Okapia_johnstoni.LVCL01S0017931.1                         34200 14 +     78940 T-T-TC-AG-------C----T-A-TT---T--AG----------
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 I 5
s Ondatra_zibethicus.OndZib_scaffold_6821                  121539 26 +    145789 T-T-TT-AGGGATTTTT----TTC-TT---C--AA-G--TA---T
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  33482 13 +     62360 T-G--T-AAGGGTAT-T----T-----------------------
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 I 9
s Orcinus_orca.KB316965.1                                 7221962 14 -   7562323 T-T-TC-AG-------C----G-T-TT---T--AG----------
i Orcinus_orca.KB316965.1                               C 0 I 6
s Orycteropus_afer.OryAfe_flattened_line_13509              40419 16 -     66828 T-C-TT-AG-------C----T-T-T----T--TA-T--TC----
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 I 2
s Oryctolagus_cuniculus.CM000803.1                      141872550 12 + 163896628 T-T-tg-ag-------a----c-t-tt---a--------------
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      304373 20 -    505867 t-t-tc-ag-----ttt----t-t-tt---t-tag-t--c----t
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       35886 18 +     38679 T-T-TT-AG-------C----T-T-TT---C--TC-C--CC---C
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18005327 18 -  38779656 T-T-TT-Ag-------c----t-t-tt---c--tc-c--cc---c
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134074616 14 - 275406953 T-T-TC-AG-------C----T-A-TT---T--AG----------
i Ovis_aries.CM001582.2                                 C 0 I 5
s Ovis_canadensis.OviCan_scaffold_6251                      75830 14 +    140051 T-T-TC-AG-------C----T-A-TT---T--AG----------
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 I 5
s Pan_paniscus.AJFE02000950.1                                 468 18 -      1008 C-T-TT-AG-------C----T-T-TT---T--AG-C--CC---T
i Pan_paniscus.AJFE02000950.1                           C 0 I 238
s Pan_troglodytes.KZ622857.1                               324321 18 +    772158 C-T-TT-AG-------C----T-T-TT---T--AG-C--CC---T
i Pan_troglodytes.KZ622857.1                            C 0 I 166
s Panthera_onca.PanOnc_flattened_line_1615                  30834 17 +    295523 T-T-TT-AG-------C----T-T-TT---T--AG-C--C----T
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3634438 17 +  18214204 t-t-tt-ag-------c----t-t-tt---t--ag-c--c----t
i Panthera_pardus.KV860323.1                            C 0 I 5
s Panthera_tigris.KE721879.1                              5024215 17 -   6340057 t-t-tt-ag-------c----t-t-tt---t--ag-c--c----t
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1063474 14 -   1292953 T-T-TC-AG-------C----T-A-TT---T--AG----------
i Pantholops_hodgsonii.KE114631.1                       C 0 I 5
s Papio_anubis.CM001492.2                               188152452 18 - 188283584 C-C-TT-AG-------C----T-T-TT---C--AG-T--CC---T
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            48664 18 +     76494 C-C-TT-AG-------C----T-T-TT---C--AG-T--CC---T
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47509849 18 +  47705337 C-C-TT-AG-------C----T-T-TT---C--AG-T--CC---T
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 63831 18 -    104429 C-C-TT-AG-------C----G-T-TT---C--AG-T--CC---T
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  13617 18 -     29451 C-C-TT-AG-------C----T-T-TT---C--AG-T--CC---T
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                34020 18 +     35859 C-C-TT-AG-------C----G-T-TT---C--AG-T--CC---T
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    112168 17 -    135482 T-T-TT-AG-------T----T-T-TT---T--AG-C--C----T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           1944 18 -     23713 T-T-TT-AG-------C----T-T-TT---C--TA-C--CC---T
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            21241 18 -     27972 T-T-TT-AG-------C----T-T-TT---C--TA-C--CC---T
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      39852 17 -     45160 T-T-TT-AG-------A----T-T--T---T--AG-T--CA---T
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4946656 14 -   8017169 t-t-tt-agggGTAT-T----T-----------------------
i Peromyscus_maniculatus.KI615518.1                     C 0 I 9
s Phocoena_phocoena.PhoPho_flattened_line_11948            118579 14 -    122454 T-T-TC-AG-------C----T-T-TT---T--AG----------
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 I 6
s Piliocolobus_badius.k141_1497351                           1705 18 -      3310 C-T-TT-AG-------C----T-T-TT---C--AG-C--CC---T
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       21611 18 -     82327 C-T-TT-AG-------C----T-T-TT---C--AG-C--CC---T
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           18363 18 +     19957 C-T-TT-AG-------C----T-T-TT---C--AG-C--CC---T
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26736372 18 +  26888534 C-T-TT-AG-------C----T-T-TT---C--AG-C--CC---T
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            93620 11 +    112873 T-T-TT-AG-------C----T-T-TA------------------
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 I 8
s Pithecia_albicans.k141_991845                             40359 18 -     61926 C-C-TT-AG-------C----A-T-TT---T--AA-C--CC---T
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        21788 18 +     78826 C-C-TT-AG-------C----A-T-TT---T--AA-C--CC---T
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              5739 18 -     15800 C-C-TT-AG-------C----A-T-TT---T--AA-C--CC---T
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                         8937 18 -     16101 C-C-TT-AG-------C----A-T-TT---T--AA-C--CC---T
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          2246 18 +      9673 C-C-TT-AG-------C----A-T-TT---T--AA-C--CC---T
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13471240 18 -  19735023 C-C-TT-AG-------C----A-T-TT---T--AA-C--CC---T
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           10148 18 -     31692 C-C-TT-AG-------C----A-T-TT---T--AA-C--CC---T
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           2646 14 +     21690 C-T-TC-AG-------C----T-T-GT---T--AG----------
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 I 6
s Plecturocebus_bernhardi.k141_959214                       19547 18 +     44506 T-T-TT-AG-------C----T-T-TT---T--AA-C--AC---T
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        19765 18 +     67491 T-T-TT-AG-------C----T-T-TT---T--AA-C--AC---T
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      10010 18 -     98129 T-T-TT-AG-------C----T-T-TT---T--AA-C--AC---T
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     19611 18 +    147771 T-T-TT-AG-------C----T-T-TT---T--AA-C--CC---T
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        19861 18 -     23762 T-T-TT-AG-------C----T-T-TT---T--AA-C--AC---T
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                           327 18 -     55515 T-T-TT-AG-------C----T-T-TT---T--AA-C--AC---T
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         19680 18 +    152463 T-T-TT-AG-------C----T-T-TT---T--AA-C--AC---T
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      6440 18 +      8943 T-T-TT-AG-------C----T-T-TT---T--AA-C--AC---T
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                          9400 18 +    134592 T-T-TT-AG-------C----T-T-TT---T--AA-C--AC---T
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          19990 18 -     75465 T-T-TT-AG-------C----T-T-TT---T--AA-C--AC---T
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              183891 18 -    373494 C-T-TC-AG-------C----T-T-TT---T--AG-C--CC---T
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19803795 18 +  19899266 C-T-TC-AG-------C----T-T-TT---T--AG-C--CC---T
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               1942 18 -     15069 C-T-TT-AG-------C----T-T-TT---C--AG-C--CC---T
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              2076 18 +     14865 C-T-TT-AG-------C----T-T-TT---C--AG-C--CC---T
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                73261 22 +     78963 T-C-TT-AG-------T----T-T-C-TTTT--TAGCTCTT----
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 I 2
s Prolemur_simus.MPIZ01000048.1                           6845283 18 +  12164890 T-T-TT-AG-------C----T-T-TT---C--TG-C--CC---T
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     13751 18 -     30946 T-T-TT-ag-------c----t-t-tt---c--tg-c--ct---t
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                          434 18 +     11805 T-T-TT-AG-------C----T-T-TT---C--TG-C--CC---T
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           39765 18 +     52369 T-T-TT-AG-------C----T-T-TT---C--TG-C--CC---T
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         32153 18 -     44753 T-T-TT-AG-------C----T-T-TT---C--TG-C--CC---T
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            14075 18 +     27322 T-T-TT-AG-------C----T-T-TT---C--TG-C--CC---T
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       13717 18 -     53241 T-T-TT-AG-------C----T-T-TT---C--TG-C--CT---T
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         35989 18 -     48185 T-T-TT-AG-------C----T-T-TT---C--TG-C--CT---T
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           30047 14 +     77221 t-t-tt-ag-gggtatt----t-----------------------
i Psammomys_obesus.NESX01026517.1                       C 0 I 9
s Pteronotus_parnellii.KE867983.1                            1184 19 -     27784 T-T-TT-Ag-------c----t-t-tt---t--ag-t--ct--tc
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        242713 17 -    344369 T-T-TT-AG-------C----T-T-TT---T--AG-T--C----T
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13243305 19 -  17261082 t-t-tt-gc-------c----t-t-tt---t--ag-t--ct--tt
i Pteropus_alecto.KB031157.1                            C 0 I 1
s Pteropus_vampyrus.KN525959.1                             601259 19 -   3946241 t-t-tt-gc-------c----t-t-tt---t--ag-t--ct--tt
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131531029 17 - 161321710 t-t-tt-ag-------c----t-t-tt---t--ag-g--C----T
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             26066 18 +     56732 C-T-TA-AG-------C----T-T-TT---C--AG-C--CC---T
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6802556 18 +   6970761 C-T-TA-AG-------C----T-T-TT---C--AG-C--CC---T
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             1948 18 +     18040 C-T-TA-AG-------C----T-T-TT---C--AG-C--CC---T
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                13122 14 +     68503 T-T-TC-AG-------C----T-A-TT---T--AG----------
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 I 5
s Rattus_norvegicus.chr11                                13911421 28 +  90463843 t-t-tt-ag-gttttttttttt-t-tt---c--aa-a--ta---t
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1784913 19 +   2252614 t-t-tt-ag-------a----t-a-tt---t--ag-t--CT--TT
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 I 3
s Rhinopithecus_bieti.k119_102124                           12504 18 -     14454 C-T-TA-AG-------C----T-T-TT---C--AG-C--CC---T
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206373830 18 - 206558726 C-T-TA-AG-------C----T-T-TT---C--AG-C--CC---T
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44851478 18 -  45163003 C-T-TA-AG-------C----T-T-TT---C--AG-C--CC---T
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                16608 19 +    109198 T-T-TT-GC-------C----T-T-TT---T--AG-T--CT--TT
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            I 5 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       4902 14 +     12214 T-T-TC-AG-------C----T-A-TT---T--AG----------
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 I 5
s Saimiri_boliviensis.NW_024100938.1                     15669448 18 -  43202129 C-T-TT-AG-------C----T-T-TT---T--AG-C--CC---T
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        1314 18 +     34089 C-T-TT-AG-------C----T-T-TT---T--AG-C--CC---T
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              1257 18 -     60842 C-T-TT-AG-------C----T-T-TT---T--AG-C--CC---T
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              1334 18 +     67014 C-T-TT-AG-------C----T-T-TT---T--AG-C--CC---T
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              1330 18 +     60816 C-T-TT-AG-------C----T-T-TT---T--AG-C--CC---T
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 1267 18 -     76454 C-T-TT-AG-------C----T-T-TT---T--AG-C--CC---T
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17337790 18 -  30362882 C-T-TT-AG-------C----T-T-TT---T--AG-C--CC---T
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         17390 18 -     62485 C-T-TT-AG-------C----T-T-TT---T--AG-C--CC---T
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   28666 12 -    114521 TTT-TT-AG-------C----T-T-TT------------------
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 I 7
s Semnopithecus_entellus.k141_1527475                       24491 18 +     26421 C-T-TT-AG-------C----T-T-TT---C--AG-C--CC---T
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       4952 18 +     20762 C-T-TT-AG-------C----T-T-TT---C--AG-C--CC---T
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         38686 18 +     40653 C-T-TT-AG-------C----T-T-TT---C--AG-C--CC---T
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                            9244 18 -     12194 C-T-TT-AG-------C----T-T-TT---C--AG-C--CC---T
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     22664 18 -     27512 C-T-TT-AG-------C----T-T-TT---C--AG-C--CC---T
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         31685 18 -     33692 C-T-TT-AG-------C----T-T-TT---C--AG-C--CC---T
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   94717 24 -    120886 T-T-TA-GGGGGTAT-T----T-T-TT---C--AA-A--TA---T
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            15174 19 +    739146 T-T-TT-AG-------A----T-T-TT---A--TG-T--CA--GT
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 I 2
s Sorex_araneus.JH798170.1                               17747564 19 -  27805282 T-T-AC-AG-------G----T-C-tt---a--gt-t--ga--tt
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2236672 18 +   2842873 t-t-tt-ag-------t----t-t-tt---c--aa-c--CA---T
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             231710 17 -    276980 T-T-TT-AG-------C----T-T-TT---T--AG-T--C----T
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            24279 17 +     62062 T-T-TT-GC-------C----T-T-TT---T--AG-C--C----T
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189269190 14 + 218635234 T-T-TC-AG-------C----T-T-TT---T--AG----------
i Sus_scrofa.CM000824.4                                 I 2 C 0
s Symphalangus_syndactylus.tarseq_24                     13898638 18 +  13920577 C-T-TT-AG-------C----T-T-TT---T--AG-C--CC---T
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               3126 19 -      6213 T-T-TT-AG-------C----T-T-TT---T--AG-T--CT--GT
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               12052 21 +     45698 C-T-TT-AG-------A----T-A-TT---T--TA-G--TTTTTT
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      804059 17 +   1148477 T-T-TT-AG-------C----T-T-TT---T--AG-T--C----T
i Tapirus_indicus.TapInd_scaffold_176                   I 2 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  54719 17 +     99546 T-T-TT-AG-------C----C-T-TT---T--AG-T--C----T
i Tapirus_terrestris.TapTer_scaffold_14939              I 2 C 0
s Tarsius_lariang.k141_609102                               23392 18 +     42269 T-T-TT-AG-------C----T-T-TT---A--AG-C--CT---T
i Tarsius_lariang.k141_609102                           C 0 I 9
s Tarsius_wallacei.k141_48636                               56706 18 +     65473 T-T-TT-GG-------C----T-T-TT---A--AG-C--CT---T
i Tarsius_wallacei.k141_48636                           C 0 I 9
s Theropithecus_gelada.CM009951.1                       194003988 18 - 194193292 C-C-TT-AG-------C----T-T-TT---C--AG-T--CC---T
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                   905 21 +      6782 T-T-TT-AG-------C----T-T-TT---T--TA-G--TCTTTA
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 I 1
s Tonatia_saurophila.TonSau_scaffold_3334                  133191 19 -    259118 T-T-TT-AG-------A----T-G-TT---T--AG-T--TT--TA
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        23062 18 +     38948 C-T-TT-AG-------C----T-T-TT---C--AG-C--CC---T
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   16789 18 -     32910 C-T-TT-AG-------C----T-T-TT---C--AG-C--CC---T
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       22687 18 +     24652 C-T-TT-AG-------C----T-T-TT---C--AG-C--CC---T
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      1565 18 -      3559 C-T-TT-AG-------C----T-T-TT---C--AG-T--CC---T
i Trachypithecus_francoisi.k141_1178450                 I 2 C 0
s Trachypithecus_geei.k141_670367                           39511 18 -     54611 C-T-TT-AG-------C----T-T-TT---C--AG-C--CC---T
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       15510 18 +     17312 C-T-TT-AG-------C----T-T-TT---C--AG-C--CC---T
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    22873 18 -     25040 C-T-TT-AG-------C----T-T-TT---C--AG-T--CC---T
i Trachypithecus_hatinhensis.k141_357672                I 2 C 0
s Trachypithecus_laotum.k141_171445                          1539 18 +      3528 C-T-TT-AG-------C----T-T-TT---C--AG-T--CC---T
i Trachypithecus_laotum.k141_171445                     I 2 C 0
s Trachypithecus_leucocephalus.k141_283605                  47901 18 +     51589 C-T-TT-AG-------C----T-T-TT---C--AG-T--CC---T
i Trachypithecus_leucocephalus.k141_283605              I 2 C 0
s Trachypithecus_melamera.k141_238507                       11076 18 +     14732 C-T-TT-AG-------C----T-T-TT---C--AG-C--CC---T
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       1554 18 -     28054 C-T-TT-AG-------C----T-T-TT---C--AG-C--CC---T
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44656349 18 -  44834318 C-T-TT-AG-------C----T-T-TT---C--AG-C--CC---T
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        1359 18 +      3372 C-T-TT-AG-------C----T-T-TT---C--AG-C--CC---T
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   2538 14 +     90398 T-T-TT-AG-------A----T-T-TT---T--AG----------
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 I 4
s Trichechus_manatus.JH594618.1                          16078645 17 +  31416278 t-c-tt-tg-------c----t-t-t---tt--ca-t--tc----
i Trichechus_manatus.JH594618.1                         C 0 I 2
s Tupaia_chinensis.KB320831.1                             2788517  4 -   3938065 ------------------------------------T--CA---T
i Tupaia_chinensis.KB320831.1                           I 24 I 2
s Tupaia_tana.TupTan_flattened_line_68454                    1054  4 +     13056 ------------------------------------T--CT---T
i Tupaia_tana.TupTan_flattened_line_68454               C 0 I 2
s Tursiops_truncatus.MRVK01000923.1                      69310680 14 -  96451834 T-T-TC-AG-------C----G-T-TT---T--AG----------
i Tursiops_truncatus.MRVK01000923.1                     C 0 I 6
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 23863 11 -     25548 C-T-TT-AG-------C----T-T-TT------------------
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 I 7
s Ursus_maritimus.KK498671.1                              6511297 17 +  28682327 T-T-TT-Ag-------c----t-t-tt---t--ag-t--c----t
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Vicugna_pacos.KN269600.1                                1521989 19 -   2331223 T-T-TC-ag-------t----t-t-tt---t--ag-t--ct--tt
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                134443 19 -    281493 T-T-TC-AG-------T----T-T-TT---TTTAG-T--C----T
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       123765 18 -    134049 T-T-TT-AG-------T----T-T-TT---C--AA-C--CA---T
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        210972 17 -    227762 T-T-TT-AG-------C----T-T-TT---G--AG-T--C----T
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           4183 14 -      8775 T-T-TC-AG-------C----T-T-TT---T--AG----------
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 I 6
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16291  1 -    119109 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     12283  2 -     20485 I
e Jaculus_jaculus.JH725517.1                              8561873  2 +  11848649 I
e Allactaga_bullata.AllBul_scaffold_70162                    8911  2 -     22067 I
e Varecia_variegata.k141_775891                             21745  0 -     33872 C
e Varecia_rubra.k141_432109                                  2200  0 -     20643 C
e Nannospalax_galili.KL201303.1                            107449  0 +    362372 C
e Dolichotis_patagonum.DolPat_scaffold_14102                33375  0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             56104 16 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                14631 16 +     26546 I
e Cavia_tschudii.CavTsc_scaffold_488                       173989  0 +    436027 C
e Cavia_porcellus.DS562889.1                             15795798  0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15783848 16 -  24422027 I

a score=0.000000
s hg38.chr4_GL000008v2_random                                8620 27 +    209709 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
s Acinonyx_jubatus.LLWD01000356.1                         2030706 23 +   3721120 T-T---T---T-------T-CC--C-TA----T--------GAATGTT--TGT--TT
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    108991 22 -    189883 T-T---T---C-------C-T---C-CA----G--------AGATTCT--TGT--TT
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 9 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10654039 23 +  23371972 t-t---t---t-------t-c--cc-ta----g--------aaatgtt--tgt--tt
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7090743 24 -  16596857 t-t-t-t---t-------t-c--cc-tG----G--------AAATGTT--TGT--TT
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allenopithecus_nigroviridis.k141_3103707                  59642 27 +     61638 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        51450 27 +     53391 T-T---CCC-TG-----CC-T---AACA----G--------AAATGTT--TCT--TT
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         2174 27 +     72529 T-T---CCC-TG-----CC-T---AACA----G--------AAATGTT--TCT--TT
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          1750 27 +      3797 T-T---CCC-TG-----CC-T---AACA----G--------AAATGTT--TCT--TT
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             6929 27 -     18050 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  8045 27 -     11521 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              7606 27 -     21359 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1856473                                5988 27 +      7227 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Alouatta_juara.k141_1856473                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          6902 27 -     10438 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            3557 27 +      7047 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             6844 27 +     10410 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                             642 27 -      4927 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             3575 27 +      6429 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3517464 22 +   4113121 ------------------C-C---C-CACATTG--------AAATGTT--TGT--TT
i Ammotragus_lervia.NIVO01013474.1                      I 5 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      387658 23 -    631301 T-T---T---T-------T-CC--C-CA----G--------AAATGTT--TGT--TT
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            28097 22 +     33004 ------------------C-C---T-CACATTG--------AAATGTT--TGT--TT
i Antilocapra_americana.AntAmePen_scaffold_42841        I 5 C 0
s Aotus_azarae.k141_3170768                                 59289 27 +     78111 C-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            2219 27 +     22701 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5746177 27 +   9889416 T-T---CCC-TG-----CC-C---Acca----g--------aaatgtt--tct--tt
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             2758 27 -    104377 T-T---TCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               2767 27 +     23246 T-T---TCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                      644 19 +      5067 T-C---C---C-CCACC-C-A------A----G--------AAATGT----------
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 I 2
s Arctocebus_calabarensis.k141_1161114                      14779 23 +     17483 T-T---T---T-------C-C---TTCA----G--------AAATGTT--TGT--TT
i Arctocebus_calabarensis.k141_1161114                  C 0 I 5
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 5800 23 -     29036 T-T---T---T-------T-CC--T-CA----G--------AAATGTT--TGT--TT
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9536030 27 +  39197703 T-T---CCC-TG-----CC-T---ACCA----G--------AAATGTT--TCT--TT
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             57314 27 +     85812 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 8313 27 +     89302 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             12823 27 -     58268 T-T---CCC-TG-----CC-T---ACCA----G--------AAATGTT--TCT--TT
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             60809 27 +    119057 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               2760 27 -     25888 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 3523 23 -     16375 T-T---T---T-------C-C---TTCA----G--------AAATTTT--TAA--TT
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_767228                               9472 23 -      9688 T-T---T---T-------C-C---TTCA----G--------AAATTTT--TAA--TT
i Avahi_peyrierasi.k141_767228                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26377418 22 +  51448160 c-c---c---g-------c-c---c-cc----g--------aaATGTT--TGT--TT
i Balaenoptera_acutorostrata.KI537095.1                 I 6 C 0
s Balaenoptera_bonaerensis.DF502048.1                        2649 22 -     13118 C-C---C---G-------C-C---C-CC----G--------AAATGTT--TGT--TT
i Balaenoptera_bonaerensis.DF502048.1                   I 6 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   40564 22 -     72089 ------------------C-C---C-CACATTG--------AAATGTT--TGT--TT
i Beatragus_hunteri.BeaHun_scaffold_21644               I 5 C 0
s Bison_bison.KN264915.1                                  6556708 22 +   6870073 ------------------C-T---C-CATATTG--------AAATGTT--TGT--TT
i Bison_bison.KN264915.1                                I 5 C 0
s Bos_indicus.CM003021.1                                138136942 22 - 161108492 ------------------C-T---C-CATATTG--------AAATGTT--TGT--TT
i Bos_indicus.CM003021.1                                I 5 C 0
s Bos_mutus.JH883513.1                                     569320 22 -    998990 ------------------C-T---C-CATATTG--------AAATGTT--TGT--TT
i Bos_mutus.JH883513.1                                  I 5 C 0
s Bos_taurus.CM000177.6                                 136292675 22 - 158972876 ------------------C-T---C-CATATTG--------AAATGTT--TGT--TT
i Bos_taurus.CM000177.6                                 I 5 C 0
s Bubalus_bubalis.KI419065.1                              1228296 22 -   1914593 ------------------C-T---C-CATATTG--------AAATGTT--TGT--TT
i Bubalus_bubalis.KI419065.1                            I 5 C 0
s Cacajao_ayresi.k141_724503                               110664 27 -    171031 T-T---GCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                  9690 27 +    125063 T-T---GCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                11738 27 -    216513 T-T---GCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        4278 27 -    134917 T-T---GCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3216927 22 -   8989139 T-T---A---C-------C-C---C-CA----G--------AAAGGTT--TGT--TT
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           394628 22 -  15254737 T-T---A---C-------C-C---C-CA----G--------AAAGGTT--TGT--TT
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2970365 22 +   6889770 T-T---A---C-------C-C---C-CA----G--------AAAGGTT--TGT--TT
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11515417 23 +  39901454 T-T---T---T-------T-CC--C-TA----A--------AAATATT--TGT--TT
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   10434 23 +     87036 T-T---T---T-------T-CC--C-TA----A--------AAATATT--TGT--TT
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11262076 23 -  35597290 t-t---t---t-------t-c--cc-ta----a--------aaatatt--tgt--tt
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11084605 23 +  39895921 t-t---t---t-------t-c--cc-ta----a--------aaatatt--tgt--tt
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16451639 23 -  44759192 t-t---t---t-------t-c--cc-ta----a--------aaatatt--tgt--tt
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21322571 22 + 157394656 ------------------C-C---C-CACATTG--------AAATGTT--TGT--TT
i Capra_aegagrus.CM003214.1                             I 5 C 0
s Capra_hircus.CM004562.1                               135703798 22 - 157403528 ------------------C-C---C-CACATTG--------AAATGTT--TGT--TT
i Capra_hircus.CM004562.1                               I 5 C 0
s Capromys_pilorides.CapPil_scaffold_647363                  1336 20 +      1887 T-T---T---C-------A-A---C-CT----G--------AAAT--A--CCT--TT
i Capromys_pilorides.CapPil_scaffold_647363             C 0 C 0
s Carlito_syrichta.NW_007248099.1                          305928 11 +    345090 ------------------------------------------AACAtt--tgt--tt
i Carlito_syrichta.NW_007248099.1                       I 9 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               56839 23 +     67245 T-T---T---T-------C-CC--C-CA----G--------AAATGTT--TGC--TT
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   27340 23 +     33760 T-T---T---T-------A-CC--C-CA----G--------AAATATT--TGT--TT
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   156135 26 -    276539 T-C---T--TT-------C-CCCTC-CA----G--------AAATGTT--TGT--TT
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18887504 27 -  29618158 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 5048 27 -     26817 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                 9291 27 +     25043 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         4970 11 +     21754 ------------------------------------------AACATT--TGT--TT
i Cephalopachus_bancanus.k141_702587                    I 9 C 0
s Ceratotherium_simum.JH767818.1                          4360625 22 +   7569818 t-t---t---t-------c-c---c-ta----g--------aaatgtt--tgt--tt
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623          380 22 -      9338 T-T---T---T-------C-C---C-TA----G--------AAATGTT--TGT--TT
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6551438 27 +   6739814 T-T---CCC-TG-----CC-C---Acca----g--------aaatgtt--tct--tt
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      52915 27 -     54931 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         17899 27 -     19697 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         55430 27 -    107033 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        1871 27 -      3853 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          25804 27 +     30494 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           1828 27 -      4022 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          1721 27 -      3505 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           20525 27 +     35983 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11987047 27 +  12117833 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46473800 27 +  46592721 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      31627 27 +     33420 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        1663 27 -      3443 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      2654 27 -      4669 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        2454 27 -      4411 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         1979 27 -      4205 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_1070855           200 22 -      1715 T-T---T---T-------C-A---C-CA----G--------AAGTGTT--TCT--TT
i Chaetophractus_vellerosus.ChaVel_scaffold_1070855     C 0 C 0
s Cheirogaleus_major.k141_1157592                           55825 23 -     68416 T-T---T---T-------C-C---TTCA----G--------AAATGTT--TGT--TT
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            4874 23 +     13308 T-T---T---T-------C-C---TTCA----G--------AAATGTT--TGT--TT
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             2307 27 -     18223 T-T---GCT-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             19330 27 +     25473 T-T---GCT-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           38369 27 +     57117 T-T---GCT-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          43044 27 +     54541 T-T---GCT-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15958708 22 +  43084221 T-T---T---C-------A-A---C-CA----G--------AAATATA--TGT--TT
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         67885 27 +    196370 T-T---GCC-TG-----CC-C---ACCA----G--------AAATATT--TCT--TT
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          12066 27 +     40510 T-T---GCC-TG-----CC-C---ACCA----G--------AAATATT--TCT--TT
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15135260 27 -  15256731 T-T---CCC-TG-----CC-T---AACA----G--------AAATGTT--TCT--TT
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      30306 27 -     53260 T-T---CCC-TG-----CC-T---AACA----G--------AAATGTT--TCT--TT
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101140755 27 + 101219884 T-T---CCC-TG-----CC-T---aaca----g--------aaatgtt--tct--tt
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                13822 22 -     21363 T-T---T---A-------C-C---C-CA----G--------AAATGTT--TCT--TT
i Choloepus_didactylus.ChoDid_scaffold_36182            I 3 C 0
s Choloepus_hoffmanni.KN194586.1                           759128 22 +    964067 T-T---T---A-------C-C---C-CA----G--------AAATGTT--TCT--TT
i Choloepus_hoffmanni.KN194586.1                        I 3 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_141308              5916 22 -     12508 T-A---T---C-------T-C---C-AA----T--------AAATGTT--TGC--TT
i Chrysochloris_asiatica.ChrAsi_scaffold_141308         I 2 C 0
s Colobus_angolensis.KN985967.1                          10879334 27 +  10971483 T-T---CCC-TG-----CC-C---Acca----g--------aaatgtt--tct--tt
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147660492 27 + 156195979 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            12478 27 +     23629 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60610089 19 +  78930452 C-C---T---T-------T-C---T-CC----C--------AAA---A--TGT--Tt
i Condylura_cristata.JH655880.1                         I 7 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         36552  6 -     40477 ------------------C-CC--C-CA-----------------------------
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     I 4 I 2
s Cricetomys_gambianus.CriGam_scaffold_949                 274434 22 -    399297 T-T---C---C-------C-T---G-CA----G--------AAATATT--TGT--TA
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53025615 22 +  72327488 t-t---c---c-------C-T---C-CA----G--------AGATGCT--TGT--TT
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             16069 21 -     19186 T-T---T---T-------T-C---T-CA----T--------AACTGTT--TA---TT
i Crocidura_indochinensis.CroInd_scaffold_38409         I 2 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            48745 11 -     70449 ------------------------------------------AATGTT--TGT--TT
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 11 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  205142 22 -    956709 T-T---T---C-------A-C---A-CA----G--------AAATGCT--TAT--TT
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 27404 22 -     67205 T-C---T---C-------A-A---T-CT----G--------AAAT--ATATGC--TT
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          179011 22 -   6883506 T-T---T---T-------C-A---C-CA----G--------AAATGTT--TCT--TT
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16841699 23 +  31942871 T-T---T---T-------C-C---TTCA----G--------AAATGTT--TGT--TT
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80034164 22 -  96802777 c-c---c---a-------c-c---c-ct----g--------aaATGTT--TGT--TT
i Delphinapterus_leucas.KZ290064.1                      I 6 C 0
s Desmodus_rotundus.KZ672188.1                           18696152 23 -  18957592 t-t---t---t-------t-c--cc-ca----g--------aaatgtt--tgt--tt
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 319287 22 +    993696 T-T---T---T-------C-C---C-TA----G--------AAATGTT--TGT--TT
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_170113                  545 22 +       818 T-T---T---T-------C-C---C-TA----G--------AAATGTT--TGT--TT
i Diceros_bicornis.DicBicMic_scaffold_170113            C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   154573 22 +    228994 T-T---T---C-------A-A---T-CA----G--------AAATATA--TGT--GT
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3652327 23 +   4240102 C-T---T---T-------A-C--Tc-ca----g--------aaatatt--tgt--tt
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 23881 23 +     28912 C-T---T---T-------A-C--TC-CA----G--------AAATATT--TGT--TT
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Echinops_telfairi.JH980316.1                           22991424 17 -  44670279 ------------------c-c---t-AA----G--------ATATGTT--TT---AT
i Echinops_telfairi.JH980316.1                          I 5 C 0
s Eidolon_helvum.KE772537.1                                  9528  5 +     24177 t-t---t---c-------c--------------------------------------
i Eidolon_helvum.KE772537.1                             C 0 I 16
s Elaphurus_davidianus.JRFZ01086400.1                     1488831 22 +   1727528 ------------------C-C---C-TACATTG--------AAATGTT--TGT--TT
i Elaphurus_davidianus.JRFZ01086400.1                   I 5 C 0
s Elephantulus_edwardii.JH947210.1                        7803587 21 +  15467074 t-t---t---c-------c-c---t-ac----g--------taatatt--ta---tt
i Elephantulus_edwardii.JH947210.1                      I 2 C 0
s Ellobius_lutescens.LOEQ01003611.1                        236083 22 -    369425 t-t---c---c-------t-G---C-CA----G--------AGATTCC--TGT--TT
i Ellobius_lutescens.LOEQ01003611.1                     I 10 C 0
s Ellobius_talpinus.LOJH01090055.1                           3091 22 -      7838 T-T---C---C-------T-G---C-CA----G--------AGATGCC--TGT--TT
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85868465 23 +  99434291 t-t---t---t-------t-c--ct-ga----g--------aaatgtt--tgt--tt
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Equus_asinus.JREZ01000062.1                             5850016 20 -   7175178 T-T---T---T-------C-C---C-TA----G----------ATGTT--TGT--TT
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13348519 20 +  41866177 T-T---T---T-------C-C---C-TA----G----------ATGTT--TGT--TT
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          10009 20 +     92910 T-T---T---T-------C-C---C-TA----G----------ATGTT--TGT--TT
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11529605 21 +  16010500 --T---C---G-------T-G---C-CA----G--------AAATATT--TGT--TG
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48767439 27 -  48907691 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          312302 22 +    330699 C-C---C---G-------C-C---C-CC----G--------AAATGTT--TGT--TT
i Eschrichtius_robustus.EscRob_flattened_line_685       I 6 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             58731 22 +     89355 C-C---C---A-------C-C---C-CC----A--------AAATGTT--TGT--TT
i Eubalaena_japonica.EubJap_flattened_line_7756         I 6 C 0
s Eulemur_albifrons.k141_715837                              1900 23 +     13586 T-T---T---T-------C-C---TTCA----G--------AAATGTT--TGT--TT
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               1836 23 -      6809 T-T---T---T-------C-C---TTCA----G--------AAATGTT--TGT--TT
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             8308 23 +     36558 T-T---T---T-------C-C---TTCA----G--------AAATGTT--TGT--TT
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             4624 23 +     60246 T-T---T---T-------C-C---TTCA----G--------AAATGTT--TGT--TT
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 8112 23 +    109717 T-T---T---T-------C-C---TTCA----G--------AAATGTT--TGT--TT
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               12486 23 +     16540 T-T---T---T-------C-C---TTCA----G--------AAATGTT--TGT--TT
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                12763 23 +     27497 T-T---T---T-------C-C---TTCA----G--------AAATGTT--TGT--TT
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           15224 23 +     26808 T-T---T---T-------C-C---TTCA----G--------AAATGTT--TGT--TT
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                29952 23 +     46535 T-T---T---T-------C-C---TTCA----G--------AAATGTT--TGT--TT
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              12675 23 -     29447 T-T---T---T-------C-C---TTCA----G--------AAATGTT--TGT--TT
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129889686 23 - 159252932 T-T---T---T-------T-CC--C-TA----T--------GAATGTT--TGT--TT
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129276760 23 - 158578461 T-T---T---T-------T-CC--C-TA----T--------GAATGTT--TGT--TT
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 17895 23 +     52776 T-T---T---T-------T-CC--C-TA----T--------GAATGTT--TGT--TT
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13889873  3 -  19261668 t-c---t--------------------------------------------------
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     207836 23 -    847004 T-T---T---T-------C-C---TTCA----G--------AAATGTT--GGT--TC
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           10216 23 -     43889 T-T---T---T-------C-C---TTCA----G--------AAATGTT--GGT--TC
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           7268 23 +     27357 T-T---T---C-------C-C---TTCA----G--------AAATGTT--GGT--TT
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               153152 18 +    324696 C-T---T---T-------C-C---C-CA----A--------AATTGTT--T------
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    178347 22 -    189561 ------------------C-C---C-CACATTG--------AAATGTT--TGT--TT
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 5 C 0
s Glis_glis.GliGli_scaffold_79770                            9550 22 -     18683 T-T---T---C-------C-C---C-CC----A--------GGAGGTT--TAT--TT
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               2015 27 -     14630 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119649113 27 - 195582420 T-T---CCC-TG-----CC-C---Acca----g--------aaatgtt--tct--tt
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   74105 22 +    118900 T-T---T---T-------C-C---C-CC----A--------GAATGTT--TAT--TT
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                         2441 23 +      3980 T-T---T---T-------C-C---TTCA----G--------AAATGTT--TGT--TT
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             24921 23 +     26611 T-T---T---T-------C-C---TTCA----G--------AAATGTT--TGT--TT
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             2375 23 +     56096 T-T---T---T-------C-C---TTCA----G--------AAATGTT--TGT--TT
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        25648 23 -     42470 T-T---T---T-------C-C---TTCA----G--------AAATGTT--TGT--TT
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        42245 23 -     54384 T-T---T---T-------C-C---TTCA----G--------AAATGTT--TGT--TT
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              13939 24 +     53719 T-T--TT---T-------T-CC--C-TA----G--------AAATGTT--TGT--TT
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                24833 22 -     91191 ------------------C-C---C-CCCACCG--------AAATGTT--TGT--TT
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 5 C 0
s Heterocephalus_glaber.JH602058.1                        2548025  3 +  31725842 T-T---T--------------------------------------------------
i Heterocephalus_glaber.JH602058.1                      C 0 I 229
s Heterohyrax_brucei.HetBruBak_scaffold_25354               53421 22 +     73687 T-T---T---C-------T-T---C-AG----G--------AAATGTT--TGT--TT
i Heterohyrax_brucei.HetBruBak_scaffold_25354           I 2 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              144412 22 +    277961 A-C---A---T-------C-C---C-CA----G--------AAATGTT--TGT--TT
i Hippopotamus_amphibius.HipAmp_scaffold_1308           I 4 C 0
s Hipposideros_armiger.JXIK01001085.1                      275852  2 -    477199 -------------------------------------------------------TT
i Hipposideros_armiger.JXIK01001085.1                   I 8 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              5002  6 -      9143 ------------------T-TC--C-CA-----------------------------
i Hipposideros_galeritus.HipGal_scaffold_104691         I 3 I 2
s Hoolock_leuconedys.ctg649                                    98685 27 +    115816 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Hoolock_leuconedys.ctg649                                C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 13008 23 -     67322 T-T---T---T-------T-CC--C-TA----G--------AAATGGT--TGT--TT
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hylobates_abbotti.k141_493872                              1822 27 +      5897 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_1485652                               249 27 -      1697 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Hylobates_agilis.k141_1485652                         n 44 I 169
s Hylobates_klossii.k141_584463                               199 27 -      1009 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Hylobates_klossii.k141_584463                         C 0 C 0
s Hylobates_muelleri.k141_1133650                            1257 27 -      2775 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             29859 28 -     60944 T-G---CCC-TG-----CC-C---TCCA----G--------AAATGTT--TCT-CTT
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     2979 22 +     22540 C-T---A---C-------A-A---C-CA----G--------AAATGta--cct--tg
i Hystrix_cristata.HysCri_scaffold_50788                C 0 I 79
s Ictidomys_tridecemlineatus.JH393315.1                   7122766 23 +  13083262 T-T---T---C-C-----C-C---T-CA----G--------AAATGTT--TGC--TT
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_3334527                                   8890 23 +      9207 T-T---T---T-------C-C---TTCA----G--------AAATGTT--TGT--TT
i Indri_indri.k141_3334527                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               6091 22 +     17520 C-C---C---G-------C-C---C-CT----G--------AAATGTT--TGT--TT
i Inia_geoffrensis.IniGeo_flattened_line_66725          I 6 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               20923 23 +     37189 C-C---C--TG-------C-C---C-CC----G--------AAATGTT--TGT--TT
i Kogia_breviceps.KogBre_flattened_line_35920           I 6 C 0
s Lagothrix_lagothricha.k141_12968                          46883 27 -    147782 T-T---CCC-TG-----CC-C---ACGA----G--------AAATGTT--TCT--TT
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lemur_catta.scaffold_1                                258403927 23 - 285822530 T-T---T---T-------C-C---TTCA----G--------AAATGTT--TGT--TT
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        20825 23 +     39228 T-T---T---T-------T-C---TTCA----G--------AAATGTT--TGT--GT
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            50199 23 +     63517 T-T---T---T-------T-C---TTCA----G--------AAATGTT--TGT--GT
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        75421 23 +    116806 T-T---T---T-------T-C---TTCA----G--------AAATGTT--TGT--GT
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     28462 23 -     33031 T-T---T---T-------T-C---TTCA----G--------AAATGTT--TGT--GT
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3082707 23 -   3498232 T-T---T---T-------T-CC--c-ta----g--------aaatgtt--tgt--tt
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                     9913 22 +     22452 T-T---A---T-------T-C---A-AA----G--------AAATGTT--AGC--TT
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            133266 22 +   3060487 C-C---C---A-------C-C---C-CT----G--------AAATGTT--TGT--TT
i Lipotes_vexillifer.KE558548.1                         I 6 C 0
s Lophocebus_aterrimus.ctg55                             19244526 27 +  19376315 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            7567 23 +     84689 T-T---T---T-------C-C---TTCA----G--------AAATGTT--TGT--TT
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3775318 23 +   6799190 T-T---T---T-------C-C---TTCA----G--------AAATGTT--TGT--TT
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20588183 22 -  62548349 t-t---t---c-------c-c---c-ag----g--------aaatgtt--tgt--tt
i Loxodonta_africana.GL010040.1                         I 2 C 0
s Lycaon_pictus.CM007556.1                               11084061 23 +  39895028 t-t---t---t-------t-c--cc-ta----a--------aaatatt--tgt--tt
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             16209 27 +     74745 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12702715 27 +  12821369 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               4811 27 +      6569 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           43112 27 +     63263 T-T---CCC-CG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_1068107                               11688 27 +     12679 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                1261 27 +      3017 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  42873 27 -     79256 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196031791 27 + 196197964 T-T---CCC-TG-----CC-C---Acca----g--------aaatgtt--tct--tt
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11441897 27 +  11645122 T-T---CCC-TG-----CC-C---Acca----g--------aaatgtt--tct--tt
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   1820 27 -     46448 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                1650 27 -      3617 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 11983 27 -     55006 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43837020 27 +  43892939 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                4243 27 -      5978 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               1825 27 -     27140 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43433686 27 -  43563597 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4446512 27 -   4543643 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            143322 22 +    252755 t-t---t---t-------t-c---c-ta----g--------aaatgtt--tgt--tt
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             33389 22 +     58827 t-t---t---t-------t-c---c-ta----g--------aaatgtt--tgt--tt
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36870613 23 +  64221397 T-T---T---C-C-----C-C---T-CA----G--------AAATGTT--TGC--TT
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       61602 14 -    234502 T-C---C---C-CC-CG-C-CC--C-CA-----------------------------
i Megaderma_lyra.MegLyr_scaffold_3562                   I 1 I 2
s Mellivora_capensis.MelCap_flattened_line_1828            225963 23 -    226874 T-T---T---A-------T-CC--T-GA----G--------AAATGTT--TGT--TT
i Mellivora_capensis.MelCap_flattened_line_1828         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233                8539 24 +     15977 T-T-TTC---C-------C-T---G-CT----G--------AGATGCT--TGT--TT
i Meriones_unguiculatus.MerUng_scaffold_52233           I 9 C 0
s Mesocricetus_auratus.KB708139.1                         1043346 21 -  26018355 t-t---c---c-------c-A---T-CA----G--------AGATGCT--TGT--T-
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_183284                    962 22 +      2166 C-C---C---G-------C-C---C-CC----G--------AAATGTT--TGT--TT
i Mesoplodon_bidens.MesBid_scaffold_183284              I 6 C 0
s Microcebus_murinus.CM007691.1                          16507044 23 +  47401472 t-t---t---t-------c-c---ttca----g--------aaatgtt--tgt--tt
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  28367 22 -     48017 T-T---G---C-------C-C---T-AA----G--------AAATGTT--TTC--AT
i Microgale_talazaci.MicTal_scaffold_34660              I 2 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               20000 23 -     32043 T-T---T---T-------C-CC--C-CA----G--------AAATGTT--TGT--TT
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22816232 22 -  98408828 t-t---C---C-------T-G---T-CA----G--------AGATGCT--TGT--TT
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8206722 27 +  10048721 t-tattt---t-------c-t-ctc-ca----g--------aaaTG--CTTGT--TT
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            31403 27 +     45743 T-TATTT---T-------C-TC-TC-CA----G--------AAATG--CTTGT--TT
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        32341 27 +     34273 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         8005 23 -    104932 T-T---T---T-------T-CC--C-TA----G--------AAATGTT--TGT--TT
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     2457 23 +      8497 T-T---T---T-------C-C---TTCA----G--------AAATGTT--TGT--TT
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 143689 22 +    154973 C-C---C---A-------C-C---C-CT----G--------AAATGTT--TGT--TT
i Monodon_monoceros.MonMon_M_scaffold_5598              I 6 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                158536 23 +    265003 T-T---T---T-------C-CC--C-CA----G--------AAATGTT--TGT--TT
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 1932 22 -      4346 ------------------C-T---C-CACATTG--------AAATGTT--TGT--TT
i Moschus_moschiferus.MosMos_scaffold_146101            I 5 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  141628 25 -    168139 T-T--TT---T-------TCCC--C-TA----G--------AAATGTT--TGT--TT
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          16537  3 -    100666 TTT------------------------------------------------------
i Murina_feae.MurFea_scaffold_2254                      I 6 C 0
s Mus_caroli.LT608236.1                                  70762078 22 +  92629107 t-t---t---g-------c-t---C-TA----T--------AGATGCT--TAT--TT
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75485199 22 +  98207768 t-t---t---g-------c-t---c-TA----T--------AGATGCT--TAT--TT
i Mus_musculus.chr16                                    I 9 C 0
s Mus_pahari.LT608305.1                                  67549518 22 +  89017189 t-t---t---g-------c-T---C-TA----T--------AGATGCT--TAT--TT
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74324619 22 +  97876770 t-t---t---g-------c-t---c-TA----T--------AGATGCT--TAT--TT
i Mus_spretus.CM004110.1                                I 9 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              8059 22 +     98495 T-T---T---A-------C-C---C-TC----A--------GAATATT--TAT--TC
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 2 C 0
s Mustela_putorius.JH417978.1                             4420858 24 -  28371801 t-t-t-t---t-------t-c--cc-ga----g--------aaatgtt--tgt--tt
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     87024 20 -    117718 T-T---T---C-------A-A---C-CT----G--------AAAC--A--TGT--TT
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             2405 16 -      8794 ------------------------C-CA----G--------AAATGTT--GCT--TT
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        I 5 C 0
s Myotis_brandtii.KE161952.1                               964864  2 +   8389877 t-t------------------------------------------------------
i Myotis_brandtii.KE161952.1                            I 6 C 0
s Myotis_lucifugus.GL429887.1                             3462450  2 -   3747815 t-t------------------------------------------------------
i Myotis_lucifugus.GL429887.1                           I 6 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         7639  2 +     66751 T-T------------------------------------------------------
i Myotis_myotis.MyoMyo_scaffold_6123                    I 6 C 0
s Nasalis_larvatus.k141_153429                               4722 27 +     48152 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4481606 23 -  14209539 T-T---T---T-------T-CC--c-ta----g--------aaatgtt--tgt--tt
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3948298 22 -   4490290 c-c---c---a-------c-c---c-ct----g--------aaATGTT--TGT--TT
i Neophocaena_asiaeorientalis.KZ688543.1                I 6 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  46653 23 +     94413 T-T---T---T-------T-C--TC-CA----G--------AAATGTT--TGT--TT
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1223136                          10491 27 -     11253 T-T---CCC-TA-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Nomascus_annamensis.k141_1223136                      C 0 C 0
s Nomascus_concolor.k141_468488                              1134 27 -      1482 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Nomascus_concolor.k141_468488                         C 0 C 0
s Nomascus_gabriellae.k141_906566                            1123 27 -      2544 T-T---CGC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             21597 27 -  18771707 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_844529                                   871 27 +      2124 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Nomascus_siki_a.k141_844529                             I 18 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                27056 23 +   3668941 t-t---t---t-------t-c--cc-ta----a--------aaatatt--tgt--tt
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65563897 23 -  95554990 T-T---T---T-------C-C---TTCA----G--------AAACGTT--TGT--TT
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                             742 23 +      6470 T-T---T---T-------C-C---TTCA----G--------AAACGTT--TGT--TT
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65666266 23 +  89412551 T-T---T---T-------C-C---TTCA----G--------AAACGTT--TGT--TT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4992594 23 -  23139505 a-t---c---t-------t-t---a-ta----a--------aaaaatt--agc-GTT
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3678120  5 +  10294119 --------------------------------------------------tgt--tt
i Octodon_degus.JH651621.1                              I 166 C 0
s Odobenus_rosmarus.KB229369.1                             676264 23 -   3126709 T-T---T---T-------T-CC--c-ta----g--------aaatgtt--tgt--tt
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1077055 22 +   1425656 ------------------C-C---C-CACATTG--------AAATCTT--TGT--TT
i Odocoileus_virginianus.KZ101650.1                     I 5 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         34219 22 +     78940 ------------------C-C---C-CACATTG--------AAATGTT--TGT--TT
i Okapia_johnstoni.LVCL01S0017931.1                     I 5 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  121565 22 +    145789 T-T---C---C-------T-G---C-CA----G--------AGATGCT--TGT--TT
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  33504 22 +     62360 T-T---C---C-------C-T---C-CA----T--------AGATGAT--TGT--TT
i Onychomys_torridus.OnyTor_scaffold_12578              I 9 C 0
s Orcinus_orca.KB316965.1                                 7221982 22 -   7562323 C-C---C---G-------C-C---C-CT----G--------AAATGTT--TGT--TT
i Orcinus_orca.KB316965.1                               I 6 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              40437 22 -     66828 T-T---T---C-------C-C---C-AA----G--------AAATATT--TGT--TT
i Orycteropus_afer.OryAfe_flattened_line_13509          I 2 C 0
s Oryctolagus_cuniculus.CM000803.1                      141872562 22 + 163896628 t-t---t---t-------t-c---a-aa----g--------aaatgtt--agC--TT
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      304393 23 -    505867 t-t---t---t-------t-c--cc-ta----a--------aaatatt--tgt--tt
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       35904 23 +     38679 T-T---T---T-------C-C---TTCA----G--------AAATGTT--GGT--TC
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18005345 23 -  38779656 t-t---t---t-------c-c---ttca----G--------AAATGTT--GGT--TC
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134074635 22 - 275406953 ------------------C-C---C-CCCACTG--------AAATGTT--TGT--TT
i Ovis_aries.CM001582.2                                 I 5 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      75849 22 +    140051 ------------------C-C---C-CCCACTG--------AAATGTT--TGT--TT
i Ovis_canadensis.OviCan_scaffold_6251                  I 5 C 0
s Pan_paniscus.CM003386.1                               127571355 27 - 205426864 T-T---CCC-TG-----CC-C---Acca----g--------aaatgtt--tct--tt
i Pan_paniscus.CM003386.1                               I 30 C 0
s Pan_troglodytes.NBAG03000771.1                           176660 27 +    210065 T-T---CCC-TG-----CC-C---Acca----g--------aaatgtt--tct--tt
i Pan_troglodytes.NBAG03000771.1                        I 1297 I 2201
s Panthera_onca.PanOnc_flattened_line_1615                  30851 25 +    295523 T-T---T---T----TT-T-CC--C-TA----T--------GAATGTT--TGT--TT
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3634460 19 +  18214204 ------------------t-c--cc-TA----T--------GAATGTT--TGT--TT
i Panthera_pardus.KV860323.1                            I 5 C 0
s Panthera_tigris.KE721879.1                              5024232 25 -   6340057 t-t---t---t----tt-t-c--cc-ta----t--------gaatgTT--TGT--TT
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1063493 22 -   1292953 ------------------C-C---C-CACATTG--------AAATGTT--TGT--TT
i Pantholops_hodgsonii.KE114631.1                       I 5 C 0
s Papio_anubis.CM001492.2                               188152470 27 - 188283584 T-T---CCC-TG-----CC-C---Acca----g--------aaatgtt--tct--tt
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            48682 27 +     76494 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47509867 27 +  47705337 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 63849 27 -    104429 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  13635 27 -     29451 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                34038 27 +     35859 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    112185 23 -    135482 T-T---T---T-------C-TC--C-CA----G--------AAATGTT--TAT--TT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           1962 23 -     23713 T-T---T---T-------C-C---TTCA----G--------AAATGTT--TGT--TT
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            21259 23 -     27972 T-T---T---T-------C-C---TTCA----G--------AAATGTT--TGT--TT
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      39869 23 -     45160 C-T---T---T-------A-C--TC-TA----G--------AAATGTT--TGT--TT
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4946679 22 -   8017169 T-G---C---C-------C-T---C-CA----G--------AGATGat--tgt--tt
i Peromyscus_maniculatus.KI615518.1                     I 9 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            118599 22 -    122454 C-C---C---A-------C-C---C-CT----G--------AAATGTT--TGT--TT
i Phocoena_phocoena.PhoPho_flattened_line_11948         I 6 C 0
s Piliocolobus_badius.k141_1497351                           1723 27 -      3310 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       21629 27 -     82327 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           18381 27 +     19957 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26736390 27 +  26888534 T-T---CCC-TG-----CC-C---Acca----g--------aaatgtt--tct--tt
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pithecia_albicans.k141_991845                             40377 27 -     61926 T-T---GCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        21806 27 +     78826 T-T---GCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              5757 27 -     15800 T-T---GCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                         8955 27 -     16101 T-T---GCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          2264 27 +      9673 T-T---GCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13471258 27 -  19735023 T-T---GCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           10166 27 -     31692 T-T---GCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           2666 22 +     21690 C-C---C---G-------C-C---C-CC----G--------AAATGTT--TGT--TC
i Platanista_gangetica.PlaMin_flattened_line_72990      I 6 C 0
s Plecturocebus_bernhardi.k141_959214                       19565 35 +     44506 T-T---CCT-TG-----CC-C---ACCA----GAAATGTTGAAATGTT--TCT--TT
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        19783 27 +     67491 T-T---CCT-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      10028 27 -     98129 T-T---CCT-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     19629 27 +    147771 T-T---GCT-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        19879 27 -     23762 T-T---CCT-TG-----AC-C---ACCA----G--------AAATGTT--TCT--TT
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                           345 27 -     55515 T-T---CCT-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         19698 27 +    152463 T-T---CCT-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      6458 27 +      8943 T-T---CCT-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                          9418 27 +    134592 T-T---CCT-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          20008 27 -     75465 T-T---CCT-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              183909 27 -    373494 T-T---CCC-TG-----CC-C---Acca----g--------aaatgtt--tct--tt
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19803813 27 +  19899266 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               1960 27 -     15069 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              2094 27 +     14865 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                73285 22 +     78963 T-T---T---C-------T-T---C-AG----G--------AAATGTT--TGT--TT
i Procavia_capensis.ProCapCap_scaffold_15315            I 2 C 0
s Prolemur_simus.MPIZ01000048.1                           6845301 23 +  12164890 T-T---T---T-------C-C---TTCA----G--------AAATGTT--TGT--TT
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     13769 23 -     30946 t-t---t---t-------c-c---ttca----g--------aaatttt--tgt--tt
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                          452 23 +     11805 T-T---T---T-------C-C---TTCA----G--------AAATTTT--TGT--TT
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           39783 23 +     52369 T-T---T---T-------C-C---TTCA----G--------AAATTTT--TGT--TT
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         32171 23 -     44753 T-T---T---T-------C-C---TTCA----G--------AAATTTT--TGT--TT
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            14093 23 +     27322 T-T---T---T-------C-C---TTCA----G--------AAATTTT--TGT--TT
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       13735 23 -     53241 T-T---T---T-------C-C---TTCA----G--------AAATTTT--TGT--TT
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         36007 23 -     48185 T-T---T---T-------C-C---TTCA----G--------AAATTTT--TGT--TT
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           30070 22 +     77221 t-t---c---c-------c-t---g-CA----G--------AGATGCT--GGT--CT
i Psammomys_obesus.NESX01026517.1                       I 9 C 0
s Pteronotus_parnellii.KE867983.1                            1203 23 -     27784 t-t---t---t-------t-c--cc-ca----g--------aaatgtt--tgt--tt
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        242730 23 -    344369 T-T---T---T-------T-CC--T-GA----G--------AAATGTT--TGT--TT
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13243325  5 -  17261082 t-t---t---c-------c--------------------------------------
i Pteropus_alecto.KB031157.1                            I 1 I 16
s Pteropus_vampyrus.KN525959.1                             601278  5 -   3946241 t-t---t---c-------c--------------------------------------
i Pteropus_vampyrus.KN525959.1                          C 0 I 16
s Puma_concolor.QAVW01000427.1                          131531046 23 - 161321710 T-T---T---T-------T-CC--C-TA----T--------GAATGTT--TGT--TT
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             26084 27 +     56732 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6802574 27 +   6970761 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             1966 27 +     18040 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                13141 22 +     68503 ------------------C-C---C-CACATTG--------AAATGTT--TGT--TT
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 5 C 0
s Rattus_norvegicus.chr11                                13911449 22 +  90463843 t-t---t---g-------t-g---c-CA----G--------AGATGCT--TAA--TT
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1784935  6 +   2252614 ------------------T-CC--C-CA-----------------------------
i Rhinolophus_sinicus.LVEH01000179.1                    I 3 I 2
s Rhinopithecus_bieti.k119_102124                           12522 27 -     14454 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206373848 27 - 206558726 T-T---CCC-TG-----CC-C---Acca----g--------aaatgtt--tct--tt
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44851496 27 -  45163003 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                16627  5 +    109198 T-T---T---C-------C--------------------------------------
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 I 16
s Saiga_tatarica.SaiTat_scaffold_82192                       4921 24 +     12214 ------------------C-C---C-CACACTG--------AAATGTT--TGTTTTT
i Saiga_tatarica.SaiTat_scaffold_82192                  I 5 C 0
s Saimiri_boliviensis.NW_024100938.1                     15669466 27 -  43202129 T-T---CCC-TG-----CC-C---acca----g--------aaatgtt--tct--tt
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        1332 27 +     34089 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              1275 27 -     60842 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              1352 27 +     67014 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              1348 27 +     60816 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 1285 27 -     76454 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17337808 27 -  30362882 T-T---CCC-TG-----CC-C---ACCA----G--------AAACGTT--TCT--TT
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         17408 27 -     62485 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   28685 18 -    114521 C-C---T---T-------T-C---C-C-----C--------TAA---A--TGT--TT
i Scalopus_aquaticus.ScaAqu_scaffold_9300               I 7 C 0
s Semnopithecus_entellus.k141_1527475                       24509 27 +     26421 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       4970 27 +     20762 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         38704 27 +     40653 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                            9262 27 -     12194 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     22682 27 -     27512 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         31703 27 -     33692 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   94741 22 -    120886 T-T---C---C-------T-T---T-CA----G--------AGATACT--TGT--TT
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            15195 19 +    739146 ----------T-------C-C---C-CA----G--------AAATGTT--TGT--TT
i Solenodon_paradoxus.SolPar_flattened_line_1012        I 2 C 0
s Sorex_araneus.JH798170.1                               17747583 22 -  27805282 t-t---t---t-------t-c---t-ca----t--------ggatttt--taa--tt
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2236690 23 +   2842873 T-T---T---C-C-----C-C---T-CA----G--------AAATGTT--TGC--TT
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             231727 23 -    276980 T-T---C---A-------T-CC--C-TA----G--------AAATGTT--TGT--TT
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            24296 24 +     62062 T-T--TT---T-------T-CC--C-TA----G--------AAATGTT--TGT--TT
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189269204 25 + 218635234 T-C---T---C-------C-CCCTC-CA----G--------AAATGTT--TGT--TT
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                     13898656 27 +  13920577 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               3145 22 -      6213 T-T---T---T-------T-CC-TT-CA----T--------AAATA----TGT--TT
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               12073 22 +     45698 T-T---T---T-------C-C---C-CA----G--------AAATGTT--GCT--TT
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      804076 22 +   1148477 T-T---T---T-------C-C---C-TG----G--------AAATGTT--TGT--TT
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  54736 22 +     99546 T-T---T---T-------C-C---C-TG----G--------AAATGTT--TGT--TT
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               23419 11 +     42269 ------------------------------------------GACGTT--TGT--TT
i Tarsius_lariang.k141_609102                           I 9 C 0
s Tarsius_wallacei.k141_48636                               56733 11 +     65473 ------------------------------------------AACGTT--TGT--TT
i Tarsius_wallacei.k141_48636                           I 9 C 0
s Theropithecus_gelada.CM009951.1                       194004006 27 - 194193292 T-T---CCC-TG-----CC-C---Acca----g--------aaatgtt--tct--tt
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                   927 15 +      6782 --------------------------CA----G--------AAATGTT--TCT--TT
i Tolypeutes_matacus.TolMat_scaffold_269431             I 1 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  133210 23 -    259118 T-T---T---T-------T-CC--C-CA----G--------AAATGTT--TGT--TT
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        23080 27 +     38948 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   16807 27 -     32910 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       22705 27 +     24652 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      1583 27 -      3559 T-T---CCC-TG-----CT-C---ACCA----G--------AAACGTT--TCT--TT
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           39529 27 -     54611 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       15528 27 +     17312 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    22891 27 -     25040 T-T---CCC-TG-----CC-C---ACCA----G--------AAACGTT--TCT--TT
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          1557 27 +      3528 T-T---CCC-TG-----CC-C---ACCA----G--------AAACGTT--TCT--TT
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  47919 27 +     51589 T-T---CCC-TG-----CT-C---ACCA----G--------AAACGTT--TCT--TT
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       11094 27 +     14732 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       1572 27 -     28054 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44656367 27 -  44834318 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        1377 27 +      3372 T-T---CCC-TG-----CC-C---ACCA----G--------AAATGTT--TCT--TT
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   2556 22 +     90398 C-C---T---C-------C-C---C-CA----G--------ATATGTT--TGT--TT
i Tragulus_javanicus.TraJav_scaffold_14717              I 4 C 0
s Trichechus_manatus.JH594618.1                          16078664 22 +  31416278 t-t---t---c-------c-c---c-ag----g--------aaatatt--tgt--tt
i Trichechus_manatus.JH594618.1                         I 2 C 0
s Tupaia_chinensis.KB320831.1                             2788523 10 -   3938065 -------------------------------------------ATGCT--TGT--TT
i Tupaia_chinensis.KB320831.1                           I 2 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    1060 10 +     13056 -------------------------------------------ATGCT--TGT--TT
i Tupaia_tana.TupTan_flattened_line_68454               I 2 C 0
s Tursiops_truncatus.MRVK01000923.1                      69310700 22 -  96451834 C-C---C---G-------C-C---C-CT----G--------CAATGTT--TGT--TT
i Tursiops_truncatus.MRVK01000923.1                     I 6 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 23881 19 -     25548 C-T---T---T-------T-C---C-CA----A--------AAA---T--TAT--TT
i Uropsilus_gracilis.UroGra_scaffold_4143_0             I 7 C 0
s Ursus_maritimus.KK498671.1                              6511314 23 +  28682327 t-t---t---t-------t-c--cc-ta----g--------aaatgtt--tgt--tt
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Vicugna_pacos.KN269600.1                                1522008 22 -   2331223 t-t---a---c-------C-C---C-CA----G--------AAAGGTT--GGT--TT
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                134462 23 -    281493 T-T---T---T-------T-CC--C-TA----A--------AAATATT--TGT--TT
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       123783 23 -    134049 T-G---T---C-C-----C-C---C-AG----G--------AAGTATT--TGT--TT
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        210989 23 -    227762 T-T---T---T-------T-CC--C-TA----G--------AAATGTT--TGT--TT
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           4203 22 -      8775 C-C---C---G-------C-C---C-CC----G--------AAATGTT--TGT--TT
i Ziphius_cavirostris.ZipCav_flattened_line_127025      I 6 C 0
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            93631  8 +    112873 I
e Myotis_davidii.KB114863.1                               5016535  6 +   6462685 I
e Lasiurus_borealis.LasBor_scaffold_5102                   111019  7 -    115756 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16291  1 -    119109 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     12283  2 -     20485 I
e Jaculus_jaculus.JH725517.1                              8561873  2 +  11848649 I
e Allactaga_bullata.AllBul_scaffold_70162                    8911  2 -     22067 I
e Varecia_variegata.k141_775891                             21745  0 -     33872 C
e Varecia_rubra.k141_432109                                  2200  0 -     20643 C
e Nannospalax_galili.KL201303.1                            107449  0 +    362372 C
e Dolichotis_patagonum.DolPat_scaffold_14102                33375  0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             56104 16 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                14631 16 +     26546 I
e Cavia_tschudii.CavTsc_scaffold_488                       173989  0 +    436027 C
e Cavia_porcellus.DS562889.1                             15795798  0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15783848 16 -  24422027 I

a score=0.000000
s hg38.chr4_GL000008v2_random                                8647 26 +    209709 TGAAT-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
s Acinonyx_jubatus.LLWD01000356.1                         2030729 27 +   3721120 TCAAT-CCA-TTTTGC--TT----CT-----CAAGA--------TAG-T
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    109013 16 -    189883 TCAAT-GAA-TATTTC--TC-----------------------------
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 I 7
s Ailuropoda_melanoleuca.LNAT01000321.1                  10654062 27 +  23371972 ttaat-cca-ttttgg--tt----CT-----CAAGA--------TAG-T
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 I 1
s Ailurus_fulgens.LNAC01000003.1                          7090767 26 -  16596857 TCAAC-CCA-TTTT-G--TT----CT-----CAAGA--------TAG-T
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allenopithecus_nigroviridis.k141_3103707                  59669 26 +     61638 TGAAT-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        51477 26 +     53391 TGAAT-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         2201 26 +     72529 TGAAT-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          1777 26 +      3797 TGAAT-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             6956 26 -     18050 TGAAT-CCA-ATTCGT--TC----CT-----C-AGA--------GTT-T
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  8072 26 -     11521 TGAAT-CCA-ATTCGT--TC----CT-----C-AGA--------GTT-T
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              7633 26 -     21359 TGAAT-CCA-ATTCGT--TC----CT-----C-AGA--------GTT-T
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1856473                                6015 26 +      7227 TGAAT-CCA-ATTCGT--TC----CT-----C-AGA--------GTT-T
i Alouatta_juara.k141_1856473                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          6929 26 -     10438 TGAAT-CCA-ATTTGT--TC----CT-----C-AGA--------GTT-T
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            3584 26 +      7047 TGAAT-CCA-ATTTGT--TC----CT-----C-AGA--------GTT-T
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             6871 26 +     10410 TGAAT-CCA-ATTCGT--TC----CT-----C-AGA--------GTT-T
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                             669 26 -      4927 TGAAT-CCA-ATTCGT--TC----CT-----C-AGA--------GTT-T
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             3602 26 +      6429 TGAAT-CCA-ATTCGT--TC----CT-----C-AGA--------GTT-T
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3517486 26 +   4113121 -CAAT-CCA-TTTTGG--TC----CT-----CAAGa--------tat-t
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      387681 27 -    631301 TCAAT-CCA-TTTTGA--TT----CT-----CAAGA--------TAT-T
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            28119 26 +     33004 -CAAT-CCA-TTTTGG--TC----CT-----CAAGA--------TAT-T
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 59316 26 +     78111 TGAAT-CCA-ATTTGT--TC----CT-----C-AGA--------GTT-T
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            2246 26 +     22701 TGAAT-CCA-ATTTGT--TC----CT-----C-AGA--------GTT-T
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5746204 26 +   9889416 tgaaT-CCA-ATTTGT--TC----CT-----C-AGA--------GTT-T
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             2785 26 -    104377 TGAAT-CCA-ATTTGT--TC----CT-----C-AGA--------GTT-T
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               2794 26 +     23246 TGAAT-CCA-GTTTGT--TC----CT-----C-AGA--------GTT-T
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                      665 20 +      5067 TCAGT-ACA-TCTTGG--TT----AT-----C-A---------------
i Aplodontia_rufa.AprRuf_scaffold_156013                I 2 C 0
s Arctocebus_calabarensis.k141_1161114                      14807 13 +     17483 -----------------------------------ATATTTTGCTAT-T
i Arctocebus_calabarensis.k141_1161114                  I 5 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 5823 27 -     29036 TCAAT-CCA-TTTTGA--TC----CT-----CAAGA--------TAT-T
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9536057 26 +  39197703 TGAAT-CCA-ATTTGT--TC----CT-----C-AGA--------GTT-T
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             57341 26 +     85812 TGAAT-CCA-ATTTGT--TC----CT-----C-AGA--------GTT-T
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 8340 26 +     89302 TGAAT-CCA-ATTTGT--TC----CT-----C-AGA--------GTT-T
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             12850 26 -     58268 TGAAT-CCA-ATTTGT--TC----CT-----C-AGA--------GTT-T
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             60836 26 +    119057 TGAAT-CCA-ATTTGT--TC----CT-----C-AGA--------GTT-T
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               2787 26 -     25888 TGAAT-CCA-ATTTGT--TC----CT-----C-AGA--------GTT-T
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 3546 26 -     16375 TTAAT-TCA-TTTTGG--TC----TT-----C-AGA--------TAT-T
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_767228                               9495 26 -      9688 TTAAT-TCA-TTTTGG--TC----TT-----C-AGA--------TAT-T
i Avahi_peyrierasi.k141_767228                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26377440 26 +  51448160 -CAAT-CCG-TTCTGG--TC----CT-----CAaga--------tat-t
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        2671 26 -     13118 -CAAT-CCG-TTCTGG--TC----CT-----CAaga--------tat-t
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   40586 26 -     72089 -CAAT-CCA-TTTTGG--TC----CT-----CAAGA--------TAT-T
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6556730 26 +   6870073 -CAAT-CCA-TTTTGG--TC----CT-----CAAGa--------tat-t
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138136964 27 - 161108492 -CAATNTCA-TTTTGG--TC----CT-----CAAGA--------tat-t
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     569342 26 -    998990 -CAAT-CCA-TTTTGG--TC----CT-----CAAga--------tat-t
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136292697 27 - 158972876 -CAATTTCA-TTTTGG--TC----CT-----CAAGa--------tat-t
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1228318 26 -   1914593 -CAAT-CCA-TTTTGG--TC----CT-----CAAga--------tat-t
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               110691 26 -    171031 TGAAT-CCA-GTTTGT--TT----CT-----C-AGA--------GTT-T
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                  9717 26 +    125063 TGAAT-CCA-GTTTGT--TT----CT-----C-AGA--------GTT-T
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                11765 26 -    216513 TGAAT-CCA-GTTTGT--TT----CT-----C-AGA--------GTT-T
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        4305 26 -    134917 TGAAT-CCA-GTTTGT--TT----CT-----C-AGA--------GTT-T
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3216949 27 -   8989139 TCAAT-CTA-TTTTGG--AC----CT-----CAAGa--------tac-t
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           394650 27 -  15254737 TCAAT-CTA-TTTTGG--AC----CT-----CAAGa--------tac-t
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2970387 27 +   6889770 TCAAT-CTA-TTTTGG--AC----CT-----CAAGa--------tac-t
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11515440 27 +  39901454 TCAAT-CCA-TTTTGG--TT----CT-----CAAGA--------TAG-T
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   10457 27 +     87036 TCAAT-CCA-TTTTGG--TT----CT-----CAAGA--------TAG-T
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11262099 27 -  35597290 tcaat-cCA-TTTTGG--TT----CT-----CAAGA--------TAG-T
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11084628 27 +  39895921 tcaat-cCA-TTTTGG--TT----CT-----CAAGA--------TAG-T
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16451662 27 -  44759192 tcaat-cCA-TTTTGG--TT----CT-----CAAGA--------TAG-T
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21322593 26 + 157394656 -CAAT-CCA-TTTTGG--TC----CT-----CAAga--------tat-t
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135703820 26 - 157403528 -CAAT-CCA-TTTTGG--TC----AT-----Caaga--------tat-t
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_647363                  1356 27 +      1887 TCTGT-TCA-TGTTGC--TC----AT-----C-TGC--------TACCT
i Capromys_pilorides.CapPil_scaffold_647363             C 0 C 0
s Carlito_syrichta.NW_007248099.1                          305939 26 +    345090 tcaat-tca-ttttgG--TC----CT-----C-AGA--------TAT-T
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               56862 27 +     67245 ACAAT-TCA-TTTTGA--TC----CT-----CAAGA--------TAT-T
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   27363 25 +     33760 TCAAT-CCA-CATTGG--CC----AT-----T-T-A--------TAT-T
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   156161 15 -    276539 TCAAT-CCA-TGTTGG--T------------------------------
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 I 9
s Cebus_albifrons.Contig22                               18887531 26 -  29618158 TGAAT-CCA-ATTTGT--TC----CT-----C-AGA--------GTT-T
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 5075 26 -     26817 TGAAT-CCA-ATTTGT--TC----CT-----C-AGA--------GTT-T
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                 9318 26 +     25043 TGAAT-CCA-ATTTGT--TC----CT-----C-AGA--------GTT-T
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         4981 26 +     21754 TCAAT-CCA-TTTTGG--TC----CT-----C-AGA--------TAT-T
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4360647 27 +   7569818 tcaat-CCA-TTTCGG--TC----CT-----caaga--------tat-t
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623          402 27 -      9338 TCAAT-CCA-TTTCGG--TC----CT-----CAAGA--------TAT-T
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6551465 26 +   6739814 tgaat-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      52942 26 -     54931 TGAAT-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         17926 26 -     19697 TGAAT-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         55457 26 -    107033 TGAAT-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        1898 26 -      3853 TGAAT-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          25831 26 +     30494 TGAAT-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           1855 26 -      4022 TGAAT-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          1748 26 -      3505 TGAAT-CCA-GTTTGG--TC----CT-----C-AGA--------GTT-T
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           20552 26 +     35983 TGAAT-CCA-GTTTGG--TC----CT-----C-AGA--------GTT-T
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11987074 26 +  12117833 TGAAT-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46473827 26 +  46592721 TGAAT-CCA-GTTTGG--TC----CT-----C-AGA--------GTT-T
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      31654 26 +     33420 TGAAT-CCA-GTTTGG--TC----CT-----C-AGA--------GTT-T
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        1690 26 -      3443 TGAAT-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      2681 26 -      4669 TGAAT-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        2481 26 -      4411 TGAAT-CCA-GTTTGG--TC----CT-----C-AGA--------GTT-T
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         2006 26 -      4205 TGAAT-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_1070855           222 27 -      1715 TCAAT-CCA-TTTTGG--TC----CT-----TTAGA--------TAT-T
i Chaetophractus_vellerosus.ChaVel_scaffold_1070855     C 0 C 0
s Cheirogaleus_major.k141_1157592                           55848 26 -     68416 TTAAT-CTA-TTTTGG--TT----TT-----C-AGA--------TAT-G
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            4897 26 +     13308 TTAAT-CTA-TTTTGG--TT----TT-----C-AGA--------TAT-G
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             2334 26 -     18223 TGAAT-CCA-ATTTGT--TC----CT-----C-AGA--------GTT-T
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             19357 26 +     25473 TGAAT-CCA-ATTTGT--TC----CT-----C-AGA--------GTT-T
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           38396 26 +     57117 TGAAT-CCA-ATTTGT--TC----CT-----C-AGA--------GTT-T
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          43071 26 +     54541 TGAAT-CCA-ATTTGT--TC----CT-----C-AGA--------GTT-T
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15958730 26 +  43084221 TCAGT-CTA-GGCTGG--TC----AC-----C-TGA--------TAT-T
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         67912 26 +    196370 TGAAT-CCA-GTTTGT--TT----CT-----C-AGA--------GTT-T
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          12093 26 +     40510 TGAAT-CCA-GTTTGT--TT----CT-----C-AGA--------GTT-T
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15135287 26 -  15256731 TGAAT-CGA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      30333 26 -     53260 TGAAT-CGA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101140782 26 + 101219884 tgaaT-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                13844 27 -     21363 TCAAT-CCA-TTTTGG--TC----CT-----TAAGA--------TAT-T
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           759150 27 +    964067 TCAAT-CCA-TTTTGG--TC----CT-----TAAGA--------TAT-T
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_141308              5938 24 -     12508 TTTGT-TAA-TTTA--GATC----TC-----TAAGA--------T----
i Chrysochloris_asiatica.ChrAsi_scaffold_141308         C 0 C 0
s Colobus_angolensis.KN985967.1                          10879361 26 +  10971483 tgaaT-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147660519 26 + 156195979 TGAAT-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            12505 26 +     23629 TGAAT-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60610108 27 +  78930452 gtaat-caa-ttttta--tt----tt-----ctgca--------tat-a
i Condylura_cristata.JH655880.1                         C 0 I 5
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         36560 27 -     40477 TCTAT-TTG-TTTTGG--TC----CT-----CAAGA--------TAT-T
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     I 2 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 274456 16 -    399297 TTAAT-GAA-TATTGG--TC-----------------------------
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 I 5
s Cricetulus_griseus.LT883672.1                          53025637 16 +  72327488 TCAAT-GAA-TAGTAT--TC-----------------------------
i Cricetulus_griseus.LT883672.1                         C 0 I 7
s Crocidura_indochinensis.CroInd_scaffold_38409             16090 22 -     19186 TCA-C-TTG-TTTTTA--TT----TT-----CAATA-------------
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            48756 27 -     70449 TCAAT-CCA-TTTTGT--TT----CT-----CAAGA--------TAG-C
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  205164 26 -    956709 TAAAC-CAG-TGTTGG--TC----AT-----C-GGA--------TAT-T
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 I 40
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 27426 26 -     67205 TCTGT-CTA-TGTTGG--TC----AT-----C-TGA--------TAT-G
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          179033 27 -   6883506 TCTAT-CCA-TTTTTG--TC----CT-----TAAGA--------TAT-T
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16841722 26 +  31942871 TCAAT-CCA-TTTTGG--TC----TT-----C-AGA--------TAT-T
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80034186 26 -  96802777 -CAAT-CCA-TTCTGG--TC----CT-----CAaga--------tat-t
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18696175 27 -  18957592 tcaat-CCA-TTTTGG--TC----CT-----CAAGA--------TAC-T
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 319309 27 +    993696 TCAAT-CCA-TTTTGG--TC----CT-----Caaga--------tat-t
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_170113                  567 27 +       818 TCAAT-CCA-TTTCGG--TC----CT-----CAAGA--------TAT-T
i Diceros_bicornis.DicBicMic_scaffold_170113            C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   154595 26 +    228994 TCAGT-CTA-TGTTAG--CC----AC-----C-TGA--------TAC-T
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3652350 25 +   4240102 tctat-ccA-CCTAGG--CC----AT-----C-A-A--------TAT-T
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 23904 25 +     28912 TCTAT-CCA-CATAGG--CC----AT-----C-A-A--------TAT-T
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Echinops_telfairi.JH980316.1                           22991441 26 -  44670279 TATAT-TCAACTTT----TC----CA-----CAAGA--------TGC-T
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                  9549 27 +     24177 TCTAT-CTA-TTTTGG--TT----CT-----TAaga--------taa-t
i Eidolon_helvum.KE772537.1                             I 16 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1488853 22 +   1727528 -CAAT-CCA-TTCTGG--TC----CT-----CAAGA-------------
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7803608 29 +  15467074 cctat-tcc-tttT----TTAATATC-----CAACA--------CAT-T
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        236105 16 -    369425 TCAAT-GAA-TATaga--tt-----------------------------
i Ellobius_lutescens.LOEQ01003611.1                     C 0 I 7
s Ellobius_talpinus.LOJH01090055.1                           3113 16 -      7838 TCAAT-GAA-TATaga--tt-----------------------------
i Ellobius_talpinus.LOJH01090055.1                      C 0 I 7
s Enhydra_lutris.KZ291749.1                              85868488 27 +  99434291 tcaat-CCA-TTTTGG--TT----CT-----CAGGA--------TAG-T
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Equus_asinus.JREZ01000062.1                             5850036 27 -   7175178 TCAAT-CCA-TTTTGG--TC----CT-----CAAGA--------TAT-C
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13348539 27 +  41866177 TCAAT-CCA-TTTTGG--TC----CT-----CAAGA--------TAT-C
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          10029 27 +     92910 TCAAT-CCA-TTTTGG--TC----CT-----CAAGA--------TAT-C
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11529626 27 +  16010500 TCGAT-CCT-TTTTGG--TT----TT-----CAAAA--------TAC-C
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48767466 26 -  48907691 TGAAT-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          312324 26 +    330699 -CAAT-CCG-TTCTGG--TC----CT-----CAAGA--------TAT-T
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             58753 26 +     89355 -CAAT-CCG-TTCTGG--TC----CT-----CAAGA--------TAT-T
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              1923 26 +     13586 TCAAT-CCA-TTTTGG--TC----TT-----C-AGA--------TAT-T
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               1859 26 -      6809 TCAAT-CCA-TTTTGG--TC----TT-----C-AGA--------TAT-T
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             8331 26 +     36558 TCAAT-CCA-TTTTGG--TC----TT-----C-AGA--------TAT-T
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             4647 26 +     60246 TCAAT-CCA-TTTTGG--TC----TT-----C-AGA--------TAT-T
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 8135 26 +    109717 TCAAT-CCA-TTTTGG--TC----TT-----C-AGA--------TAT-T
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               12509 26 +     16540 TCAAT-CCA-TTTTGG--TC----TT-----C-AGA--------TAT-T
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                12786 26 +     27497 TCAAT-CCA-TTTTGG--TC----TT-----C-AGA--------TAT-T
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           15247 26 +     26808 TCAAT-CCA-TTTTGG--TC----TT-----C-AGA--------TAT-T
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                29975 26 +     46535 TCAAT-CCA-TTTTGG--TC----TT-----C-AGA--------TAT-T
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              12698 26 -     29447 TCAAT-CCA-TTTTGG--TC----TT-----C-AGA--------TAT-T
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129889709 27 - 159252932 TCAAT-CCA-TTTTGC--TT----CT-----CAAGA--------TAC-T
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129276783 27 - 158578461 TCAAT-CCA-TTTTGC--TT----CT-----CAAGA--------TAC-T
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 17918 27 +     52776 TCAAT-CCA-TTTTGC--TT----CT-----CAAGA--------TAC-T
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Galago_moholi.ctg555                                     207859 34 -    847004 TCAAT-TTA-TTTTGC--TC----TT-----C-AGATATTTTGCTAT-T
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           10239 34 -     43889 TCAAT-TTA-TTTTGC--TC----TT-----C-AGATATTTTGCTAT-T
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           7291 34 +     27357 TCAAT-TTA-TTTTGC--TC----TT-----C-AGATATTTTGCTAT-T
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               153170 19 +    324696 --------A-TTTTGG--TC----TT-----C-AGA--------TAT-T
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    178369 26 -    189561 -CAAT-CCA-TTTTGG--TC----CT-----CAAga--------tat-t
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                            9572 26 -     18683 TCAAC-CTA-GGTTGG--TC----AT-----C-AGA--------TAT-T
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               2042 26 -     14630 TGAAT-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119649140 26 - 195582420 tgaaT-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   74127 26 +    118900 TCAAT-CTA-TGTTGG--TC----AT-----C-AGA--------TAT-T
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                         2464 26 +      3980 TCAAT-CCA-TTTTGG--TC----TT-----C-AGA--------TAC-T
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             24944 26 +     26611 TCAAT-CCA-TTTTGG--TC----TT-----C-AGA--------TAC-T
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             2398 26 +     56096 TCAAT-CCA-TTTTGG--TC----TT-----C-AGA--------TAC-T
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        25671 26 -     42470 TCAAT-CCA-TTTTGG--TC----TT-----C-AGA--------TAC-T
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        42268 26 -     54384 TCAAT-CCA-TTTTGG--TC----TT-----C-AGA--------TAC-T
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              13963 27 +     53719 TCAGT-CCA-TTTTCT--TT----CT-----CAAGA--------TAG-T
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                24855 26 -     91191 -CAAT-CCA-TTTTGG--TC----CT-----CAAGA--------TAT-T
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               53443 27 +     73687 TCTAT-TCC-TTTTGG--TG----TC-----AAAGT--------TAT-T
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              144434 27 +    277961 CCAGT-CCA-TTGTGG--TC----CT-----CAAGA--------TAT-T
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      275854 27 -    477199 TCCAT-CCA-TTTTGG--CC----TT-----CAaga--------tat-t
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              5010 27 -      9143 TCCAT-CCA-TTTTGG--CT----TT-----CAAGA--------TAT-T
i Hipposideros_galeritus.HipGal_scaffold_104691         I 2 C 0
s Hoolock_leuconedys.ctg649                                    98712 26 +    115816 TGAAT-CTG-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Hoolock_leuconedys.ctg649                                C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 13031 27 -     67322 TCAAT-CCA-TTTTGT--TT----CT-----CAAGA--------TAG-T
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hylobates_abbotti.k141_493872                              1849 26 +      5897 TGAAT-CTG-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_282275                               1062 26 +      1846 TGAAT-CTG-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Hylobates_agilis.k141_282275                          I 44 C 0
s Hylobates_klossii.k141_584463                               226 26 -      1009 TGAAT-CTG-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Hylobates_klossii.k141_584463                         C 0 C 0
s Hylobates_muelleri.k141_1133650                            1284 26 -      2775 TGAAT-CTG-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             29887 26 -     60944 TGAAT-CTG-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     3080 26 +     22540 TCAGT-CTA-TGTTAA--TC----AT-----C-TGA--------TAT-C
i Hystrix_cristata.HysCri_scaffold_50788                I 79 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7122789 25 +  13083262 TCAAT-CCA-TGTGA---CT----AT-----C-AAA--------TAC-C
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_3334527                                   8913 26 +      9207 TTGAT-CCA-TTTTGG--TC----TT-----C-AGA--------CAT-G
i Indri_indri.k141_3334527                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               6113 25 +     17520 -CAAT-CCA-T-CTGG--TC----CT-----CAAGA--------TAT-T
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               20946 26 +     37189 -CAAT-CCA-TTCTGG--TC----CT-----CAAGA--------TAT-T
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          46910 26 -    147782 TCAAT-CCA-ATTTGT--TC----CT-----C-AGA--------GTT-T
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lemur_catta.scaffold_1                                258403950 26 - 285822530 TCAAT-CCA-TTTTGG--TC----TT-----C-AGA--------TAC-T
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        20848 26 +     39228 TCAAT-CCA-TTTTGG--TC----TT-----C-AGA--------TAT-T
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            50222 26 +     63517 TCAAT-CCA-TTTTGG--TC----TT-----C-AGA--------TAT-T
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        75444 26 +    116806 TCAAT-CCA-TTTTGG--TC----TT-----C-AGA--------TAT-T
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     28485 26 -     33031 TCAAT-CCA-TTTTGG--TC----TT-----C-AGA--------TAT-T
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3082730 27 -   3498232 tcaat-CCA-TTATGG--TT----CT-----CAAGA--------TAG-T
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                     9935 26 +     22452 CCACT-CCA-TTGTGG--CC----AT-----C-AGA--------TAT-T
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            133288 26 +   3060487 -CAAT-CCA-TTCTGG--TC----CT-----CAaga--------tat-t
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19244553 26 +  19376315 TGAAT-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            7590 34 +     84689 TCGAT-CTA-CTTTGC--TC----TT-----C-ACATATTTTGCTAT-T
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3775341 34 +   6799190 TCGAT-CTA-CTTTGC--TC----TT-----C-ACATATTTTGCTAT-T
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20588205 27 -  62548349 tctgt-tta-ttttgg--tc----TC-----CAAGA--------TAT-T
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11084084 27 +  39895028 tcaat-cCA-TTTTGG--TT----CT-----CAAGA--------TAG-T
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             16236 26 +     74745 TGAAT-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12702742 26 +  12821369 TGAAT-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               4838 26 +      6569 TGAAT-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           43139 26 +     63263 TGAAT-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_1068107                               11715 26 +     12679 TGAAT-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                1288 26 +      3017 TGAAT-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  42900 26 -     79256 TGAAT-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196031818 26 + 196197964 tgaat-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11441924 26 +  11645122 tgaat-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   1847 26 -     46448 TGAAT-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                1677 26 -      3617 TGAAT-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 12010 26 -     55006 TGAAT-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43837047 26 +  43892939 TGAAT-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                4270 26 -      5978 TGAAT-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               1852 26 -     27140 TGAAT-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43433713 26 -  43563597 TGAAT-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4446539 26 -   4543643 TGAAT-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            143344 27 +    252755 tcaat-CCA-TTTTGG--TC----CT-----GAAGA--------TCT-T
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             33411 27 +     58827 tcaat-CCA-TTTTGG--TC----CT-----GAAAA--------TAT-T
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36870636 25 +  64221397 TCAAT-ACA-TGTGA---CT----AT-----C-AAA--------TAC-C
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       61618 27 -    234502 TCTAT-CCA-TTTCGG--TC----CT-----CAAGA--------TAT-T
i Megaderma_lyra.MegLyr_scaffold_3562                   I 2 C 0
s Mellivora_capensis.MelCap_flattened_line_1828            225986 27 -    226874 TCAAT-CCA-TTTTGG--TT----CT-----CAGGA--------TAG-T
i Mellivora_capensis.MelCap_flattened_line_1828         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233                8563 15 +     15977 TCAAT-GAA-TAAT-G--TC-----------------------------
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 I 7
s Mesocricetus_auratus.KB708139.1                         1043367 16 -  26018355 TCAAT-AAG-TAATGT--TC-----------------------------
i Mesocricetus_auratus.KB708139.1                       C 0 I 7
s Mesoplodon_bidens.MesBid_scaffold_183284                    984 26 +      2166 -CAAT-CCA-TTCTGG--TC----CT-----CAAGA--------TAC-T
i Mesoplodon_bidens.MesBid_scaffold_183284              C 0 C 0
s Microcebus_murinus.CM007691.1                          16507067 26 +  47401472 ttaat-cca-ttttgg--tc----TT-----C-aga--------tat-t
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  28389 26 -     48017 TATAT-TCAACTTT----TC----CA-----CAAGA--------TGC-T
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               20023 27 -     32043 TCAAT-CCA-TTTTGG--TC----CT-----TAAGA--------TAT-T
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22816254 16 -  98408828 TCAAT-GAA-TATAGa--tt-----------------------------
i Microtus_ochrogaster.CM001673.1                       C 0 I 7
s Miniopterus_natalensis.LDJU01000022.1                   8206749 27 +  10048721 TCAAT-CCA-TTTTGG--TC----CT-----Caaga--------tat-t
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            31430 27 +     45743 TCAAT-CCA-TTTTGG--TC----CT-----CAAGA--------TAT-T
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        32368 26 +     34273 TGAAT-CCA-GTTTGG--TC----CT-----C-AGA--------GTT-T
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         8028 27 -    104932 TCAAT-CCA-TTATGG--TT----CT-----CAAGA--------TAG-C
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     2480 26 +      8497 TTAAT-CCA-TTTTGG--TC----TT-----C-AGA--------TAT-T
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 143711 26 +    154973 -CAAT-CCA-TTCTGG--TC----CT-----CAAGA--------TAT-T
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                158559 27 +    265003 TCAAT-CCA-TTTTTG--TC----CT-----CAAGA--------CAT-T
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 1954 26 -      4346 -CAAT-CAA-TTTTGG--GC----CT-----CAAGA--------TAT-T
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  141653 27 -    168139 TCAGT-CCA-TTTTGT--TT----CT-----CAAGA--------TAG-T
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Mus_caroli.LT608236.1                                  70762100 16 +  92629107 TTAAT-GAG-TGTTAG--TC-----------------------------
i Mus_caroli.LT608236.1                                 C 0 I 7
s Mus_musculus.chr16                                     75485221 16 +  98207768 TTAAT-GAG-TGTTGG--CC-----------------------------
i Mus_musculus.chr16                                    C 0 I 7
s Mus_pahari.LT608305.1                                  67549540 16 +  89017189 TTAAC-GAG-TGTTGG--TC-----------------------------
i Mus_pahari.LT608305.1                                 C 0 I 7
s Mus_spretus.CM004110.1                                 74324641 16 +  97876770 TTAAT-GAG-TGTTGG--TC-----------------------------
i Mus_spretus.CM004110.1                                C 0 I 7
s Muscardinus_avellanarius.MusAve_scaffold_9643              8081 24 +     98495 TCAAT---A-TGTTGG--TC----AT-----C-AGA--------TAT-T
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4420882 27 -  28371801 tcaat-CCA-TTTTGG--TT----CT-----CAGGA--------TAG-T
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     87044 27 -    117718 TCCAT-CTC-TGTTGG--TC----AT-----C-TGC--------TATCT
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             2421 21 -      8794 TCAAT-CCA-TTTCGG--TC----CT-----TAA---------------
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 I 1
s Nannospalax_galili.KL201303.1                            107449 10 +    362372 ------------------------at-----a-aga--------aaa-a
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               4749 26 +     48152 TGAAT-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4481629 27 -  14209539 tcaat-CCA-TTTTGG--TT----CT-----CAAGA--------TAG-T
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3948320 26 -   4490290 -CAAT-CCA-TTCTGG--TC----CT-----CAaga--------tat-t
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  46676 27 +     94413 TCAAT-CCA-TTTTTG--TC----CT-----TAAGA--------TAT-T
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1223136                          10518 26 -     11253 TGAAT-CTG-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Nomascus_annamensis.k141_1223136                      C 0 C 0
s Nomascus_concolor.k141_468488                              1161 26 -      1482 TGAAT-CTG-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Nomascus_concolor.k141_468488                         C 0 C 0
s Nomascus_gabriellae.k141_906566                            1150 26 -      2544 TGAAT-CTG-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             21624 26 -  18771707 TGAAT-CTG-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_844529                                   898 26 +      2124 TGAAT-CTG-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Nomascus_siki_a.k141_844529                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                27079 27 +   3668941 tcaat-cCA-TTTTGG--TT----CT-----CAAGA--------TAG-T
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65563920 34 -  95554990 TCGAT-CTA-TTTTGC--TC----TT-----C-ACATATTTTGCTAT-T
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                             765 34 +      6470 TCGAT-CTA-TTTTGC--TC----TT-----C-ACATATTTTGCTAT-T
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65666289 34 +  89412551 TCGAT-CTA-TTTTGC--TC----TT-----C-ACATATTTTGCTAT-T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4992617 26 -  23139505 TTAAT-TTA-TTGTGG--TC----AT-----C-AGA--------TTT-T
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3678125 31 +  10294119 tttca-ctt-tgttgg--ta----atttcttt-tga--------tgt-g
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             676287 27 -   3126709 tcaaT-CCA-TTTTGG--TT----CT-----CAAGA--------TAG-T
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1077077 26 +   1425656 -CAAT-CCA-TTCTGG--TC----CT-----CAAGA--------TAG-T
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         34241 26 +     78940 -CAAT-CCA-TTTTGG--TC----CT-----CAAGa--------tat-t
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  121587 16 +    145789 TCAAT-GAA-TATAGA--TT-----------------------------
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 I 7
s Onychomys_torridus.OnyTor_scaffold_12578                  33526 16 +     62360 CAAAT-GAA-TATTGG--TC-----------------------------
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 I 7
s Orcinus_orca.KB316965.1                                 7222004 26 -   7562323 -CAAT-CCA-TTCTGG--TC----CT-----CAaga--------tat-t
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              40459 25 -     66828 CCTAT-TCA-TTTT----AC----CC-----CAAGA--------TAC-T
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141872584 26 + 163896628 Ccaat-cca-ttgtgg--cc----at-----c-aga--------tAT-T
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      304416 26 -    505867 tcaat-cCA--TTTGG--TT----CT-----CAAGA--------TAG-T
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       35927 34 +     38679 TCAAT-TTA-TTTTGC--TC----TT-----C-AGATATTTTGCTAT-T
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18005368 34 -  38779656 TCAAT-TTA-TTTTGC--TC----TT-----C-AGATATTTTGCTAT-T
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134074657 26 - 275406953 -CAAT-CCA-TTTTGG--TC----CT-----CAAGA--------tat-t
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      75871 26 +    140051 -CAAT-CCA-TTTTGG--TC----CT-----CAAGA--------TAT-T
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127571382 26 - 205426864 tgaaT-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120148529 26 - 196562556 tgaat-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Pan_troglodytes.CM009241.2                            I 57 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  30876 27 +    295523 TCAAT-CCA-TTTTGC--TT----CT-----CAAGA--------TAG-T
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3634479 27 +  18214204 TCAAT-CCA-TTTTGC--TT----CT-----CAAGA--------TAG-T
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5024257 27 -   6340057 TCAAT-CCA-TTTTGC--TT----CT-----CAAGA--------TAG-T
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1063515 26 -   1292953 -CAAT-CCA-TTTTGG--TC----CT-----CAAGa--------tat-t
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188152497 26 - 188283584 tgaat-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            48709 26 +     76494 TGAAT-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47509894 26 +  47705337 TGAAT-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 63876 26 -    104429 TGAAT-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  13662 26 -     29451 TGAAT-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                34065 26 +     35859 TGAAT-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    112208 27 -    135482 TCAAT-CCA-TTTTGT--TT----CT-----CAAGA--------TAG-T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 I 231
s Perodicticus_ibeanus.k141_117958                           1985 34 -     23713 TCAAT-CTA-TTTTGC--TC----TT-----C-ATATATTTTGCTAT-T
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            21282 34 -     27972 TCAAT-CTA-TTTTGC--TC----TT-----C-ATATATTTTGCTAT-T
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      39892 25 -     45160 TCAAT-CCA-TGTAGG--TC----AT-----C-A-A--------TAT-T
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4946701 16 -   8017169 taaat-gaa-tattgG--TC-----------------------------
i Peromyscus_maniculatus.KI615518.1                     C 0 I 7
s Phocoena_phocoena.PhoPho_flattened_line_11948            118621 26 -    122454 -CAAT-CCA-TTCTGG--TC----CT-----CAAGA--------TAT-T
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           1750 26 -      3310 TGAAT-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       21656 26 -     82327 TGAAT-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           18408 26 +     19957 TGAAT-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26736417 26 +  26888534 tgaat-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pithecia_albicans.k141_991845                             40404 26 -     61926 TGAAT-CCA-ATTTGT--TC----CT-----C-AGA--------GTT-T
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        21833 26 +     78826 TGAAT-CCA-ATTTGT--TC----CT-----C-AGA--------GTT-T
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              5784 26 -     15800 TGAAT-CCA-ATTTGT--TC----CT-----C-AGA--------GTT-T
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                         8982 26 -     16101 TGAAT-CCA-ATTTGT--TC----CT-----C-AGA--------GTT-T
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          2291 26 +      9673 TGAAT-CCA-ATTTGT--TC----CT-----C-AGA--------GTT-T
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13471285 26 -  19735023 TGAAT-CCA-ATTTGT--TC----CT-----C-AGA--------GTT-T
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           10193 26 -     31692 TGAAT-CCA-ATTTGT--TC----CT-----C-AGA--------GTT-T
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           2688 26 +     21690 -CAAT-CCA-TTCTGG--TC----CT-----CAAGA--------TAT-T
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       19600 26 +     44506 TGAAT-CCA-ATTTGT--TC----CT-----C-AGA--------GTT-T
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        19810 26 +     67491 TGAAT-CCA-ATTTGT--TC----CT-----C-AGA--------GTT-T
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      10055 26 -     98129 TGAAT-CCA-ATTTGT--TC----CT-----C-AGA--------GTT-T
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     19656 26 +    147771 TGAAT-CCA-ATTTGT--TC----CT-----C-AGA--------GTT-T
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        19906 26 -     23762 TGAAT-CCA-ATTTGT--TC----CT-----C-AGA--------GTT-T
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                           372 26 -     55515 TGAAT-CCA-ATTTGT--TC----CT-----C-AGA--------GTT-T
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         19725 26 +    152463 TGAAT-CCA-ATTTGT--TC----CT-----C-AGA--------GTT-T
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      6485 26 +      8943 TGAAT-CCA-ATTTGT--TC----CT-----C-AGA--------GTT-T
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                          9445 26 +    134592 TGAAT-CCA-ATTTGT--TC----CT-----C-GGA--------GTT-T
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          20035 26 -     75465 TGAAT-CCA-ATTTGT--TC----CT-----C-AGA--------GTT-T
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              183936 26 -    373494 tgaat-cCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19803840 26 +  19899266 TGAAT-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               1987 26 -     15069 TGAAT-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              2121 26 +     14865 TGAAT-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                73307 27 +     78963 TCTAT-TCC-TTTTGG--TC----TC-----AAAGT--------TAT-T
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6845324 26 +  12164890 TCAAT-CCA-TTTTGG--TC----TT-----C-AGA--------TAC-T
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     13792 26 -     30946 ttaat-cca-ttttgg--cc----TT-----C-aga--------tat-t
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                          475 26 +     11805 TTAAT-CCA-TTTTGC--TC----TT-----C-AGA--------TAT-T
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           39806 26 +     52369 TTAAT-CCA-TTTTGC--TC----TT-----C-AGA--------TAT-T
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         32194 26 -     44753 TTAAT-CCA-TTTTGC--TC----TT-----C-AGA--------TAT-T
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            14116 26 +     27322 TTAAT-CCA-TTTTGC--TC----TT-----C-AGA--------TAT-T
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       13758 26 -     53241 TTAAT-CCA-TTTTGG--CC----TT-----C-AGG--------TAT-T
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         36030 26 -     48185 TTAAT-CCA-TTTTGG--CA----TT-----C-AGA--------TAT-T
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           30092 15 +     77221 TCAGT-GAA-TACT-G--TC-----------------------------
i Psammomys_obesus.NESX01026517.1                       C 0 I 7
s Pteronotus_parnellii.KE867983.1                            1226 27 -     27784 tcaat-CCA-TTTTGg--tc----tt-----caaaa--------tat-t
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        242753 27 -    344369 TCAAT-CCA-TTTCGG--TT----CT-----CAGGA--------TAG-T
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13243346 27 -  17261082 tctat-cta-tTTTGG--TT----CT-----Taaga--------tat-t
i Pteropus_alecto.KB031157.1                            I 16 C 0
s Pteropus_vampyrus.KN525959.1                             601299 27 -   3946241 tctat-cta-tTTTGG--TT----CT-----TAaga--------tat-t
i Pteropus_vampyrus.KN525959.1                          I 16 C 0
s Puma_concolor.QAVW01000427.1                          131531069 27 - 161321710 TCAAT-CCA-TTTTGC--TT----CT-----CAAGA--------TAG-T
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             26111 26 +     56732 TGAAT-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6802601 26 +   6970761 TGAAT-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             1993 26 +     18040 TGAAT-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                13163 26 +     68503 -CAAT-CCA-TTCTGG--TC----CT-----CAAAA--------TAT-T
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13911471 16 +  90463843 TTAAT-GAA-GATTGG--Tc-----------------------------
i Rattus_norvegicus.chr11                               C 0 I 7
s Rhinolophus_sinicus.LVEH01000179.1                      1784943 27 +   2252614 TCCAT-CCC-TTTTGG--TC----TT-----CAaga--------tat-t
i Rhinolophus_sinicus.LVEH01000179.1                    I 2 C 0
s Rhinopithecus_bieti.k119_102124                           12549 26 -     14454 TGAAT-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206373875 26 - 206558726 tgaat-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44851523 26 -  45163003 TGAAT-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                16648 27 +    109198 TCTAT-CTA-TTTTGA--TT----CT-----TAAGA--------TAT-T
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            I 16 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       4945 26 +     12214 -CAAT-CCA-TTTTGG--TC----CT-----CAAGA--------TAT-T
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15669493 26 -  43202129 tgaaT-CCA-ATTTGC--TC----CT-----C-AGA--------GTT-T
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        1359 26 +     34089 TGAAT-CCA-ATTTGC--TC----CT-----C-AGA--------GTT-T
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              1302 26 -     60842 TGAAT-CCA-ATTTGC--TC----CT-----C-AGA--------GTT-T
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              1379 26 +     67014 TGAAT-CCA-ATTTGC--TC----CT-----C-AGA--------GTT-T
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              1375 26 +     60816 TGAAT-CCA-ATTTGC--TC----CT-----C-AGA--------GTT-T
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 1312 26 -     76454 TGAAT-CCA-ATTTGC--TC----CT-----C-AGA--------GTT-T
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17337835 26 -  30362882 TGAAT-CCA-ATTTGT--TC----CT-----C-AGA--------GTT-T
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         17435 26 -     62485 TGAAT-CCA-ATTTGT--TC----CT-----C-AGA--------GTT-T
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   28703 27 -    114521 GCAGT-CAA-TTCTTA--TT----TT-----CAGGA--------TAT-A
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1527475                       24536 26 +     26421 TGAAT-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       4997 26 +     20762 TGAAT-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         38731 26 +     40653 TGAAT-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                            9289 26 -     12194 TGAAT-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     22709 26 -     27512 TGAAT-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         31730 26 -     33692 TGAAT-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   94763 16 -    120886 TCAAT-GAA-TATTGT--TC-----------------------------
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 I 1560
s Solenodon_paradoxus.SolPar_flattened_line_1012            15214 27 +    739146 TCAAT-CTG-CTTTTG--CC----TT-----CAAGA--------TTT-A
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17747605 18 -  27805282 tcaac-tta-ttttct--tc----tt-----------------------
i Sorex_araneus.JH798170.1                              C 0 I 8
s Spermophilus_dauricus.KZ294190.1                        2236713 25 +   2842873 TCAAT-CCA-TGTGA---CT----AT-----C-AAA--------TAC-C
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             231750 27 -    276980 TCAAT-CCA-TTTTTG--TT----CT-----AAAGA--------TAG-T
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            24320 27 +     62062 TCAGT-CCA-TTTTGT--TT----CT-----CAAGA--------TAG-T
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189269229 15 + 218635234 TCAAT-CCA-TGTTGG--T------------------------------
i Sus_scrofa.CM000824.4                                 C 0 I 9
s Symphalangus_syndactylus.tarseq_24                     13898683 26 +  13920577 TGAAT-CTG-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               3167 27 -      6213 TCAAT-CCA-TTTTGG--TT----CT-----CAGGA--------TAT-T
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               12095 21 +     45698 TCAAT-CCA-TTTCGG--TT----CT-----TAA---------------
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 I 1
s Tapirus_indicus.TapInd_scaffold_176                      804098 26 +   1148477 TCAAT-CCA-TTTTAG--T-----CT-----CAAGA--------TAT-T
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  54758 26 +     99546 TCAAT-CCA-TTTTAG--T-----CA-----CAAGA--------TAT-T
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               23430 26 +     42269 TCAAT-CCA-TTTTGG--TC----CT-----C-AGA--------TAT-T
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               56744 26 +     65473 TCAAT-CCA-TTTTGG--TC----CT-----C-AGA--------TAT-T
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194004033 26 - 194193292 tgaat-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                   942 27 +      6782 TCAAT-CCA-TTTTGG--TC----CT-----TAAGA--------TAC-T
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  133233 27 -    259118 TCAAT-CCA-TTTTGA--TC----CT-----CCAGA--------TAT-A
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        23107 26 +     38948 TGAAT-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   16834 26 -     32910 TGAAT-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       22732 26 +     24652 TGAAT-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      1610 26 -      3559 TGAAT-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           39556 26 -     54611 TGAAT-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       15555 26 +     17312 TGAAT-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    22918 26 -     25040 TGAAT-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          1584 26 +      3528 TGAAC-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  47946 26 +     51589 TGAAT-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       11121 26 +     14732 TGAAT-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       1599 26 -     28054 TGAAT-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44656394 26 -  44834318 TGAAT-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        1404 26 +      3372 TGAAT-CCA-ATTTGG--TC----CT-----C-AGA--------GTT-T
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   2578 26 +     90398 -CAAT-CGA-TTTTGA--TC----CT-----CAAGA--------TGT-T
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16078686 27 +  31416278 tctat-tca-ttTCGG--TC----CC-----Caaga--------tat-t
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2788533 26 -   3938065 TCAAT-TCA-TCTTTG--TT----ac-----t-gta--------tgt-t
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    1070 26 +     13056 TCAAT-CCA-TCTTTG--TT----AC-----T-GTA--------TGT-T
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69310722 26 -  96451834 -CAAT-CCA-TTCTGG--TC----CT-----CAaga--------tat-t
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 23900 27 -     25548 TCAGT-CTA-TTTTCA--TT----TT-----CAAGA--------TAT-A
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6511337 27 +  28682327 ttaat-cca-ttttgg--tt----cT-----CAAGA--------TAG-T
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  2200  2 -     20643 ----------------------------------------------T-G
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             21745  2 -     33872 ----------------------------------------------T-G
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1522030 27 -   2331223 TCAAT-CTA-TTTTGG--AC----CT-----CAAGA--------TAC-T
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                134485 27 -    281493 TCAAT-CCA-TTTTGG--TT----CT-----CAAGA--------TAG-T
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       123806 26 -    134049 TCAAT-CCA-TGTCAG--TT----AT-----C-AAA--------TAT-C
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        211012 27 -    227762 TCAAT-CCA-TTTTGG--TT----CT-----CAAGA--------TAG-T
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           4225 26 -      8775 -CAAT-CCA-TTCTGG--TC----CT-----CAAGA--------TAT-T
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            93631  8 +    112873 I
e Myotis_myotis.MyoMyo_scaffold_6123                         7641  0 +     66751 C
e Myotis_lucifugus.GL429887.1                             3462452  0 -   3747815 C
e Myotis_davidii.KB114863.1                               5016535  6 +   6462685 I
e Myotis_brandtii.KE161952.1                               964866  0 +   8389877 C
e Murina_feae.MurFea_scaffold_2254                          16540  0 -    100666 C
e Lasiurus_borealis.LasBor_scaffold_5102                   111019  7 -    115756 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16291  1 -    119109 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     12283  2 -     20485 I
e Jaculus_jaculus.JH725517.1                              8561873  2 +  11848649 I
e Allactaga_bullata.AllBul_scaffold_70162                    8911  2 -     22067 I
e Heterocephalus_glaber.JH602058.1                        2548028 229 +  31725842 I
e Fukomys_damarensis.KN123630.1                          13889876  0 -  19261668 C
e Dolichotis_patagonum.DolPat_scaffold_14102                33375  0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             56104 16 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                14631 16 +     26546 I
e Cavia_tschudii.CavTsc_scaffold_488                       173989  0 +    436027 C
e Cavia_porcellus.DS562889.1                             15795798  0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15783848 16 -  24422027 I

a score=0.000000
s hg38.chr4_GL000008v2_random                                8673 10 +    209709 TAG-A-AT-G-TT---A
s Acinonyx_jubatus.LLWD01000356.1                         2030756 10 +   3721120 AAG-A-AT-T-TT---A
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    109036 10 -    189883 AAA-A-TT-T-TA---A
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 7 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10654090 10 +  23371972 AAG-A-AT-T-TT---A
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 1 C 0
s Ailurus_fulgens.LNAC01000003.1                          7090793 10 -  16596857 AAG-A-AT-T-TT---A
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allenopithecus_nigroviridis.k141_3103707                  59695 10 +     61638 AAG-A-AT-G-TT---A
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        51503 10 +     53391 AAG-A-AT-G-TT---A
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         2227 10 +     72529 AAG-A-AT-G-TT---A
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          1803 10 +      3797 AAG-A-AT-G-CT---A
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             6982 10 -     18050 AAG-A-AT-G-TT---A
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  8098 10 -     11521 AAG-A-AT-G-TT---A
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              7659 10 -     21359 AAG-A-AT-G-TT---A
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1856473                                6041 10 +      7227 AAG-A-AT-G-TT---A
i Alouatta_juara.k141_1856473                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          6955 10 -     10438 AAG-A-AT-G-TT---A
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            3610 10 +      7047 AAG-A-AT-G-TT---A
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             6897 10 +     10410 AAG-A-AT-G-TT---A
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                             695 10 -      4927 AAG-A-AT-G-TT---A
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             3628 10 +      6429 AAG-A-AT-G-TT---A
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3517512 10 +   4113121 aag-a-at-t-tc---a
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      387708 10 -    631301 AAG-A-AT-T-TT---G
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            28145 10 +     33004 AAG-A-AT-T-TC---A
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 59342 10 +     78111 AAG-A-AT-G-TT---A
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            2272 10 +     22701 AAG-A-AT-G-TT---A
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5746230 10 +   9889416 AAG-A-AT-G-TT---A
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             2811 10 -    104377 AAG-A-AT-G-TT---A
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               2820 10 +     23246 AAG-A-AT-G-TT---A
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                      685 10 +      5067 -AG-A-AT-TTTT---A
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 I 196
s Arctocebus_calabarensis.k141_1161114                      14820 10 +     17483 CAG-A-AT-T-TT---A
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 5850 10 -     29036 AAG-A-AT-T-GT---G
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9536083 10 +  39197703 AAG-A-AT-G-TT---A
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             57367 10 +     85812 AAA-A-AT-G-TT---A
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 8366 10 +     89302 AAA-A-AT-G-TT---A
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             12876 10 -     58268 AAG-A-AT-G-TT---A
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             60862 10 +    119057 AAA-A-AT-G-TT---A
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               2813 10 -     25888 AAA-A-AT-G-TT---A
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 3572 10 -     16375 AAG-A-AT-T-TT---A
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_767228                               9521 10 -      9688 AAG-A-AT-T-TT---A
i Avahi_peyrierasi.k141_767228                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26377466 10 +  51448160 aag-a-at-t-tt---a
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        2697 10 -     13118 aag-a-at-t-tt---a
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   40612 10 -     72089 AAG-A-AT-T-TC---A
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6556756 10 +   6870073 aag-a-at-t-tc---a
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138136991 10 - 161108492 aag-a-at-t-tc---a
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     569368 10 -    998990 aag-a-at-t-tc---a
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136292724 10 - 158972876 aag-a-at-t-tc---a
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1228344 10 -   1914593 aag-a-at-t-tc---a
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               110717 10 -    171031 AAG-A-AT-G-TT---A
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                  9743 10 +    125063 AAG-A-AT-G-TT---A
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                11791 10 -    216513 AAG-A-AT-G-TT---A
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        4331 10 -    134917 AAG-A-AT-G-TT---A
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3216976 10 -   8989139 ctg-a-tt-t-tt---a
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           394677 10 -  15254737 ctg-a-tt-t-tt---a
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2970414 10 +   6889770 ctg-a-tt-t-tt---a
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11515467 10 +  39901454 AAG-A-AT-T-TT---A
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   10484 10 +     87036 AAG-A-AT-T-TT---A
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11262126 10 -  35597290 AAG-A-AT-T-TT---A
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11084655 10 +  39895921 AAG-A-AT-T-TT---A
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16451689 10 -  44759192 AAG-A-AT-T-TT---A
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21322619 10 + 157394656 aag-a-at-t-tc---a
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135703846 10 - 157403528 aag-a-at-t-tc---a
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_647363                  1383 10 +      1887 AAG-G-AT-G-TT---T
i Capromys_pilorides.CapPil_scaffold_647363             C 0 C 0
s Carlito_syrichta.NW_007248099.1                          305965 10 +    345090 AGC-A-AT-T-TT---A
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               56889 10 +     67245 AAG-A-AT-T-TT---G
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   27388 10 +     33760 ATA-A-AT-T-TT---A
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   156185 10 -    276539 ATG-A-AT-T-TT---A
i Catagonus_wagneri.CatWag_scaffold_1305                I 9 C 0
s Cebus_albifrons.Contig22                               18887557 10 -  29618158 AAG-A-AT-G-TT---A
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 5101 10 -     26817 AAG-A-AT-G-TT---A
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                 9344 10 +     25043 AAG-A-AT-G-TT---A
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         5007 10 +     21754 AGC-A-AT-T-TT---A
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4360674 10 +   7569818 aat-a-at-t-tt---a
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623          429 10 -      9338 AAT-A-AT-T-TT---A
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6551491 10 +   6739814 AAG-A-AT-G-TT---A
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      52968 10 -     54931 AAG-A-AT-G-TT---A
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         17952 10 -     19697 AAG-A-AT-G-TT---A
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         55483 10 -    107033 AAG-A-AT-G-TT---A
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        1924 10 -      3853 AAG-A-AT-G-TT---A
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          25857 10 +     30494 AAG-A-AT-G-TT---A
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           1881 10 -      4022 AAG-A-AT-G-TT---A
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          1774 10 -      3505 AAG-A-AT-G-TT---A
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           20578 10 +     35983 AAG-A-AT-G-TT---A
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11987100 10 +  12117833 AAG-A-AT-G-TT---A
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46473853 10 +  46592721 CAG-A-AT-G-TT---A
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      31680 10 +     33420 AAG-A-AT-G-TT---A
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        1716 10 -      3443 AAG-A-AT-G-TT---A
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      2707 10 -      4669 AAG-A-AT-G-TT---A
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        2507 10 -      4411 CAG-A-AT-G-TT---A
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         2032 10 -      4205 AAG-A-AT-G-TT---A
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_1070855           249 10 -      1715 AAG-A-AT-T-TT---A
i Chaetophractus_vellerosus.ChaVel_scaffold_1070855     C 0 C 0
s Cheirogaleus_major.k141_1157592                           55874 10 -     68416 AAG-A-AT-T-TT---A
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            4923 10 +     13308 AAG-A-AT-T-TT---A
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             2360 10 -     18223 AAG-A-AT-G-TT---A
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             19383 10 +     25473 AAG-A-AT-G-TT---A
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           38422 10 +     57117 AAG-A-AT-G-TT---A
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          43097 10 +     54541 AAG-A-AT-G-TT---A
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15958756 10 +  43084221 AAG-A-AT-T-TT---T
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         67938 10 +    196370 AAG-A-AT-G-TT---A
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          12119 10 +     40510 AAG-A-AT-G-TT---A
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15135313 10 -  15256731 AAG-A-AT-G-TT---A
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      30359 10 -     53260 AAG-A-AT-G-TT---A
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101140808 10 + 101219884 AAG-A-AT-G-TT---A
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                13871 10 -     21363 AAG-A-AT-T-TT---A
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           759177 10 +    964067 AAG-A-AT-T-TT---A
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_141308              5962 10 -     12508 ATG-A-AT-T-TT---A
i Chrysochloris_asiatica.ChrAsi_scaffold_141308         C 0 C 0
s Colobus_angolensis.KN985967.1                          10879387 10 +  10971483 AAG-A-AT-G-TT---A
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147660545 10 + 156195979 AAG-A-AT-G-TT---A
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            12531 10 +     23629 AAG-A-AT-G-TT---A
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60610140  5 +  78930452 ------------tttaa
i Condylura_cristata.JH655880.1                         I 5 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         36587 10 -     40477 AAA-A-AT-A-TT---A
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 274477  6 -    399297 ------TG-T-TA---A
i Cricetomys_gambianus.CriGam_scaffold_949              I 5 C 0
s Cricetulus_griseus.LT883672.1                          53025660 10 +  72327488 AAG-A-TT-T-TA---A
i Cricetulus_griseus.LT883672.1                         I 7 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             16112  8 -     19186 TAG-T-AT-T-C-----
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            48783 10 -     70449 AGA-A-AT-T-TT---A
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  205230 10 -    956709 AAG-A-AT-T-TT---A
i Ctenodactylus_gundi.CteGun_scaffold_447               I 40 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 27452 10 -     67205 AAG-A-AT-T-TT---T
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          179060 10 -   6883506 AAG-A-AT-T-TT---A
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16841748 10 +  31942871 AAG-A-AG-T-TT---A
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80034212 10 -  96802777 aag-a-at-t-tt---a
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18696202 10 -  18957592 AAG-A-AT-T-TT---G
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 319336 10 +    993696 aat-a-at-t-tt---a
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_170113                  594 10 +       818 AAT-A-AT-T-TT---A
i Diceros_bicornis.DicBicMic_scaffold_170113            C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   154621 10 +    228994 ACA-A-AC-T-TT---T
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3652375 10 +   4240102 ACA-A-AT-C-TT---A
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 23929 10 +     28912 ACA-A-AT-C-TT---A
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Echinops_telfairi.JH980316.1                           22991467 10 -  44670279 AAA-C-AT-T-TG---A
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                  9576 10 +     24177 aag-a-at-t-tt---a
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1488875  5 +   1727528 -------T-T-TC---A
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7803637 10 +  15467074 AAG-A-GT-T-CC---A
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        236128 10 -    369425 aaa-a-tt-t-ca---a
i Ellobius_lutescens.LOEQ01003611.1                     I 7 C 0
s Ellobius_talpinus.LOJH01090055.1                           3136 10 -      7838 aaa-a-at-t-tg---a
i Ellobius_talpinus.LOJH01090055.1                      I 7 C 0
s Enhydra_lutris.KZ291749.1                              85868515 10 +  99434291 AAG-A-AT-T-TT---A
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Equus_asinus.JREZ01000062.1                             5850063 10 -   7175178 AAG-A-AT-T-TT---A
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13348566 10 +  41866177 AAG-A-AT-T-TT---A
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          10056 10 +     92910 AAG-A-AT-T-TT---A
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11529653 10 +  16010500 GCT-A-AG-C-GT---A
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48767492 10 -  48907691 AAG-A-AT-G-TT---A
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          312350 10 +    330699 AAG-A-AT-T-TT---A
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             58779 10 +     89355 AAG-A-AT-T-TT---A
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              1949 10 +     13586 AAG-A-AT-T-AT---A
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               1885 10 -      6809 AAG-A-AT-T-AT---A
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             8357 10 +     36558 AAG-A-AT-T-AT---A
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             4673 10 +     60246 AAG-A-AT-T-AT---A
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 8161 10 +    109717 AAG-A-AT-T-AT---A
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               12535 10 +     16540 AAG-A-AT-T-AT---A
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                12812 10 +     27497 AAG-A-AT-T-AT---A
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           15273 10 +     26808 AAG-A-AT-T-AT---A
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                30001 10 +     46535 AAG-A-AT-T-AT---A
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              12724 10 -     29447 AAG-A-AT-T-AT---A
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129889736 10 - 159252932 AAG-A-AT-T-TT---A
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129276810 10 - 158578461 AAG-A-AT-T-TT---A
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 17945 10 +     52776 AAG-A-AT-T-TT---A
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Galago_moholi.ctg555                                     207893 10 -    847004 CAG-A-AC-A-TT---A
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           10273 10 -     43889 CAG-A-AC-A-TT---A
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           7325 10 +     27357 CAG-A-AC-T-TT---A
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               153189 11 +    324696 AAG-A-AT-T-TT--TA
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    178395 10 -    189561 aag-a-at-t-tc---a
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                            9598  9 -     18683 AAG-A-AT-T-TA----
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               2068 10 -     14630 AAG-A-AT-G-TT---A
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119649166 10 - 195582420 AAG-A-AT-G-TT---A
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   74153  9 +    118900 AAG-A-AT-T-TA----
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 I 3
s Hapalemur_alaotrensis.k141_1198205                         2490 10 +      3980 AAG-A-AT-T-TT---A
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             24970 10 +     26611 AAG-A-AT-T-TT---A
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             2424 10 +     56096 AAG-A-AT-T-TT---A
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        25697 10 -     42470 AAG-A-AT-T-TT---A
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        42294 10 -     54384 AAG-A-AT-T-TT---A
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              13990 10 +     53719 AGA-A-AT-T-TT---A
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                24881 10 -     91191 AAG-A-AT-T-TC---A
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               53470 10 +     73687 AAT-A-AT-T-TG---A
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              144461 10 +    277961 AAG-A-AT-T-TT---A
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      275881 10 -    477199 aag-a-at-t-tt---a
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              5037 10 -      9143 AGG-A-AT-T-TT---T
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg649                                    98738 10 +    115816 AAG-A-AT-G-TT---A
i Hoolock_leuconedys.ctg649                                C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 13058 10 -     67322 AGA-A-AT-T-TT---A
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hylobates_abbotti.k141_493872                              1875 10 +      5897 AAG-A-AT-G-TT---A
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_282275                               1088 10 +      1846 AAG-A-AT-G-TT---A
i Hylobates_agilis.k141_282275                          C 0 C 0
s Hylobates_klossii.k141_584463                               252 10 -      1009 AAG-A-AT-G-TT---A
i Hylobates_klossii.k141_584463                         C 0 C 0
s Hylobates_muelleri.k141_1133650                            1310 10 -      2775 AAG-A-AT-G-TT---A
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             29913 10 -     60944 AAG-A-AT-G-TT---A
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     3106 10 +     22540 AAG-A-AT-T-TT---A
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7122814 10 +  13083262 AAG-A-AT-T-TT---A
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 I 186
s Indri_indri.k141_3334527                                   8939 10 +      9207 AAG-A-AT-T-TT---A
i Indri_indri.k141_3334527                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               6138 10 +     17520 AAG-A-AT-T-TT---A
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               20972 10 +     37189 AAG-A-AT-T-TT---A
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          46936 10 -    147782 AAG-A-AT-G-TT---A
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lemur_catta.scaffold_1                                258403976 10 - 285822530 AAG-A-AT-T-TT---A
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        20874 10 +     39228 AAG-A-AT-T-TT---A
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            50248 10 +     63517 AAG-A-AT-T-TT---A
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        75470 10 +    116806 AAG-A-AT-T-TT---A
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     28511 10 -     33031 AAG-A-AT-T-TT---A
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3082757 10 -   3498232 AAG-A-AT-T-TT---A
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                     9961 10 +     22452 AAG-A-CA-TT-T---A
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            133314 10 +   3060487 aag-a-at-t-tt---a
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19244579 10 +  19376315 AAG-A-AT-G-TT---A
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            7624 10 +     84689 CAG-A-AT-T-TT---A
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3775375 10 +   6799190 CAG-A-AT-T-TT---A
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20588232 10 -  62548349 AAG-A-AT-T-CT---A
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11084111 10 +  39895028 AAG-A-AT-T-TT---A
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             16262 10 +     74745 AAG-A-AT-G-TT---A
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12702768 10 +  12821369 AAG-A-AT-G-TT---A
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               4864 10 +      6569 AAG-A-AT-G-TT---A
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           43165 10 +     63263 AAG-A-AT-G-TT---A
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_1068107                               11741 10 +     12679 AAG-A-AT-G-TT---A
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                1314 10 +      3017 AAG-A-AT-G-TT---A
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  42926 10 -     79256 AAG-A-AT-G-TT---A
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196031844 10 + 196197964 AAG-A-AT-G-TT---A
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11441950 10 +  11645122 AAG-A-AT-G-TT---A
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   1873 10 -     46448 AAG-A-AT-G-TT---A
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                1703 10 -      3617 AAG-A-AT-G-TT---A
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 12036 10 -     55006 AAG-A-AT-G-TT---A
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43837073 10 +  43892939 AAG-A-AT-G-TT---A
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                4296 10 -      5978 AAG-A-AT-G-TT---A
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               1878 10 -     27140 AAG-A-AT-G-TT---A
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43433739 10 -  43563597 AAG-A-AT-G-TT---A
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4446565 10 -   4543643 AAG-A-AT-G-TT---A
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            143371 10 +    252755 AAG-G-AC-T-TT---A
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             33438 10 +     58827 AAG-G-AC-T-TT---A
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36870661 10 +  64221397 AAG-A-AT-T-TT---A
i Marmota_marmota.CZRN01000005.1                        C 0 I 183
s Megaderma_lyra.MegLyr_scaffold_3562                       61645 10 -    234502 TAG-A-AT-T-TG---A
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_1828            226013 10 -    226874 AAG-A-AT-T-TT---A
i Mellivora_capensis.MelCap_flattened_line_1828         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233                8585 10 +     15977 AAG-A-GT-T-TA---A
i Meriones_unguiculatus.MerUng_scaffold_52233           I 7 C 0
s Mesocricetus_auratus.KB708139.1                         1043390 10 -  26018355 AAG-A-TT-T-TA---A
i Mesocricetus_auratus.KB708139.1                       I 7 C 0
s Mesoplodon_bidens.MesBid_scaffold_183284                   1010 10 +      2166 AAG-A-AT-T-TT---A
i Mesoplodon_bidens.MesBid_scaffold_183284              C 0 C 0
s Microcebus_murinus.CM007691.1                          16507093 10 +  47401472 aag-a-at-t-tt---a
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  28415 10 -     48017 AAT-A-AT-T-TG---A
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               20050 10 -     32043 AAG-A-AT-T-TT---G
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22816277 10 -  98408828 aaa-a-at-t-ca---a
i Microtus_ochrogaster.CM001673.1                       I 7 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8206776 10 +  10048721 aag-a-at-t-tt---a
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            31457 10 +     45743 AAG-A-AT-T-TT---A
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        32394 10 +     34273 AAG-A-AT-G-TT---A
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         8055 10 -    104932 AAG-A-AT-T-TT---A
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     2506 10 +      8497 AAG-A-AT-T-TT---A
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 143737 10 +    154973 AAG-A-AT-T-TT---A
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                158586 10 +    265003 AAG-A-AT-T-TT---A
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 1980 10 -      4346 AAG-A-AT-T-TC---A
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  141680 10 -    168139 AGA-A-AT-T-TT---A
i Mungos_mungo.MunMun_flattened_line_8729               C 0 I 4
s Mus_caroli.LT608236.1                                  70762123 10 +  92629107 AAG-A-TT-T-TA---A
i Mus_caroli.LT608236.1                                 I 7 I 878
s Mus_musculus.chr16                                     75485244 10 +  98207768 AAG-A-TT-T-TA---a
i Mus_musculus.chr16                                    I 7 I 830
s Mus_pahari.LT608305.1                                  67549563 10 +  89017189 AAG-A-TT-T-TA---a
i Mus_pahari.LT608305.1                                 I 7 I 2675
s Mus_spretus.CM004110.1                                 74324664 11 +  97876770 AAG-A-TTTT-TA---A
i Mus_spretus.CM004110.1                                I 7 I 2599
s Muscardinus_avellanarius.MusAve_scaffold_9643              8105  9 +     98495 AAG-A-AT-T-TT----
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4420909  1 -  28371801 A----------------
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     87071 10 -    117718 AAG-A-AT-T-TT---T
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             2443 10 -      8794 AAG-A-AT-T-TT---A
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        I 1 C 0
s Nannospalax_galili.KL201303.1                            107459 10 +    362372 aaa-g-at-t-tt---a
i Nannospalax_galili.KL201303.1                         C 0 I 25
s Nasalis_larvatus.k141_153429                               4775 10 +     48152 AAG-A-AT-G-TT---A
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4481656 10 -  14209539 AAG-A-AT-T-TT---A
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3948346 10 -   4490290 aag-a-at-t-tt---a
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  46703 10 +     94413 AAG-A-AT-C-TT---A
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1223136                          10544 10 -     11253 AAG-A-AT-G-TT---A
i Nomascus_annamensis.k141_1223136                      C 0 C 0
s Nomascus_concolor.k141_468488                              1187 10 -      1482 AAG-A-AT-G-TT---A
i Nomascus_concolor.k141_468488                         C 0 I 23
s Nomascus_gabriellae.k141_906566                            1176 10 -      2544 AAG-A-AT-G-TT---A
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             21650 10 -  18771707 AAG-A-AT-G-TT---A
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_844529                                   924 10 +      2124 AAG-A-AT-G-TT---A
i Nomascus_siki_a.k141_844529                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                27106 10 +   3668941 AAG-A-AT-T-TT---A
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65563954 10 -  95554990 CAG-A-AT-T-TT---A
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                             799 10 +      6470 CAG-A-AT-T-TT---A
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65666323 10 +  89412551 CAG-A-AT-T-TT---A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4992643  9 -  23139505 AAG-A-AA-T--T---G
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3678156 10 +  10294119 aaa-a-ac-t-tc---t
i Octodon_degus.JH651621.1                              C 0 I 574
s Odobenus_rosmarus.KB229369.1                             676314 10 -   3126709 AAG-A-AT-T-TT---A
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1077103 10 +   1425656 AAG-A-AT-T-TC---A
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         34267 10 +     78940 aag-a-at-t-tc---a
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  121610 10 +    145789 AAA-A-AT-T-CA---A
i Ondatra_zibethicus.OndZib_scaffold_6821               I 7 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  33549 11 +     62360 AAG-A-TTTT-TA---A
i Onychomys_torridus.OnyTor_scaffold_12578              I 7 C 0
s Orcinus_orca.KB316965.1                                 7222030 10 -   7562323 aag-a-at-t-tt---a
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              40484 10 -     66828 AAG-A-AT-T-TT---A
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141872610 10 + 163896628 AAG-A-CA-TT-T---A
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      304442 10 -    505867 AAG-A-AT-T-TT---A
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       35961 10 +     38679 CAG-A-AC-A-TT---A
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18005402 10 -  38779656 CAG-A-AC-A-TT---A
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134074683 10 - 275406953 aag-a-at-t-tc---a
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      75897 10 +    140051 AAG-A-AT-T-TC---A
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127571408 10 - 205426864 AAG-A-AT-G-TT---A
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120148555 10 - 196562556 AAG-A-AT-G-TT---A
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  30903 10 +    295523 AAG-A-AT-T-TT---A
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3634506 10 +  18214204 AAG-A-AT-T-TT---A
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5024284 10 -   6340057 AAG-A-AT-T-TT---A
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1063541 10 -   1292953 aag-a-at-t-tc---a
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188152523 10 - 188283584 AAG-A-AT-G-TT---A
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            48735 10 +     76494 AAG-A-AT-G-TT---A
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47509920 10 +  47705337 AAG-A-AT-G-TT---A
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 63902 10 -    104429 AAG-A-AT-G-TT---A
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  13688 10 -     29451 AAG-A-AT-G-TT---A
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                34091 10 +     35859 AAG-A-AT-G-TT---A
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    112466 10 -    135482 AAA-A-AT-T-TT---A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 I 231 C 0
s Perodicticus_ibeanus.k141_117958                           2019 10 -     23713 CAT-A-AT-T-TT---A
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            21316 10 -     27972 CAG-A-AT-T-TT---A
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      39917 10 -     45160 AAG-A-AT-T-TT---A
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4946724 10 -   8017169 CGG-G-TT-T-TA---A
i Peromyscus_maniculatus.KI615518.1                     I 7 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            118647 10 -    122454 AAG-A-AT-T-TT---A
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           1776 10 -      3310 AAG-A-AT-G-TT---A
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       21682 10 -     82327 AAG-A-AT-G-TT---A
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           18434 10 +     19957 AAG-A-AT-G-TT---A
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26736443 10 +  26888534 AAG-A-AT-G-TT---A
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pithecia_albicans.k141_991845                             40430 10 -     61926 AAG-A-AT-G-TT---A
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        21859 10 +     78826 AAG-A-AT-G-TT---A
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              5810 10 -     15800 AAG-A-AT-G-TT---A
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                         9008 10 -     16101 AAG-A-AT-G-TT---A
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          2317 10 +      9673 AAG-A-AT-G-TT---A
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13471311 10 -  19735023 AAG-A-AT-G-TT---A
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           10219 10 -     31692 AAG-A-AT-G-TT---A
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           2714 10 +     21690 AAG-A-AT-T-TT---A
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       19626 10 +     44506 AAG-A-AT-G-TT---A
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        19836 10 +     67491 AAG-A-AT-G-TT---A
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      10081 10 -     98129 AAG-A-AT-G-TT---A
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     19682 10 +    147771 AAG-A-AT-G-TT---A
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        19932 10 -     23762 AAG-A-AT-G-TT---A
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                           398 10 -     55515 AAG-A-AT-G-TT---A
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         19751 10 +    152463 AAG-A-AT-G-TT---A
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      6511 10 +      8943 AAG-A-AT-G-TT---A
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                          9471 10 +    134592 AAG-A-AT-G-TT---A
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          20061 10 -     75465 AAG-A-AT-G-TT---A
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              183962 10 -    373494 AAG-A-AT-G-TT---A
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19803866 10 +  19899266 AAG-A-AT-G-TT---A
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               2013 10 -     15069 AAG-A-AT-G-TT---A
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              2147 10 +     14865 AAG-A-AT-G-TT---A
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                73334 10 +     78963 AAT-A-AT-T-TG---A
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6845350 10 +  12164890 AAG-A-AT-T-TT---A
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     13818 10 -     30946 aag-a-at-t-tt---a
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                          501 10 +     11805 AAG-A-AT-T-TT---A
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           39832 10 +     52369 AAG-A-AT-T-TT---A
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         32220 10 -     44753 AAG-A-AT-T-TT---A
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            14142 10 +     27322 AAG-A-AT-T-TT---A
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       13784 10 -     53241 AAG-A-AT-T-TT---A
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         36056 10 -     48185 AAG-A-AT-T-TT---A
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           30114 10 +     77221 AAG-A-AT-T-TA---A
i Psammomys_obesus.NESX01026517.1                       I 7 C 0
s Pteronotus_parnellii.KE867983.1                            1253 10 -     27784 aag-a-at-t-tt---a
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        242780 10 -    344369 AAG-A-AT-T-TT---A
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13243373 10 -  17261082 aag-a-at-t-tt---a
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             601326 10 -   3946241 aag-a-at-t-tt---a
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131531096 10 - 161321710 AAG-A-AT-T-TT---A
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             26137 10 +     56732 AAG-A-AT-G-TT---A
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6802627 10 +   6970761 AAG-A-AT-G-TT---A
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             2019 10 +     18040 AAG-A-AT-G-TT---A
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                13189 10 +     68503 AAG-A-AT-T-TC---A
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13911494 10 +  90463843 aaa-a-tt-t-ta---a
i Rattus_norvegicus.chr11                               I 7 I 663
s Rhinolophus_sinicus.LVEH01000179.1                      1784970 10 +   2252614 aag-a-at-t-tt---a
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           12575 10 -     14454 AAG-A-AT-G-TT---A
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206373901 10 - 206558726 AAG-A-AT-G-TT---A
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44851549 10 -  45163003 AAG-A-AT-G-TT---A
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                16675 10 +    109198 TAG-A-AT-T-TT---A
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       4971 10 +     12214 AAG-A-AT-T-TC---A
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15669519 10 -  43202129 AAG-A-AT-G-TT---A
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        1385 10 +     34089 AAG-A-AT-G-TT---A
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              1328 10 -     60842 AAG-A-AT-G-TT---A
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              1405 10 +     67014 AAG-A-AT-G-TT---A
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              1401 10 +     60816 AAG-A-AT-G-TT---A
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 1338 10 -     76454 AAG-A-AT-G-TT---A
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17337861 10 -  30362882 AAG-G-AT-G-TT---A
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         17461 10 -     62485 AAG-G-AT-G-TT---A
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   28730  6 -    114521 AAAAC-A----------
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 I 3
s Semnopithecus_entellus.k141_1527475                       24562 10 +     26421 AAG-A-AT-G-TT---A
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       5023 10 +     20762 AAG-A-AT-G-TT---A
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         38757 10 +     40653 AAG-A-AT-G-TT---A
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                            9315 10 -     12194 AAG-A-AT-G-TT---A
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     22735 10 -     27512 AAG-A-AT-G-TT---A
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         31756 10 -     33692 AAG-A-AT-G-TT---A
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   96339 10 -    120886 AAG-G-TT-T-TA---A
i Sigmodon_hispidus.SigHis_scaffold_11332               I 1560 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            15241 10 +    739146 AAG-A-AC-T-TT---A
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17747631  8 -  27805282 TAG-T-AA-T-A-----
i Sorex_araneus.JH798170.1                              I 8 C 0
s Spermophilus_dauricus.KZ294190.1                        2236738 10 +   2842873 AAG-A-AT-T-TT---A
i Spermophilus_dauricus.KZ294190.1                      C 0 I 182
s Spilogale_gracilis.SpiGra_flattened_line_905             231777 10 -    276980 AAG-G-AT-T-TT---A
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            24347 10 +     62062 AGA-A-AT-T-TT---A
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189269253 10 + 218635234 ATG-A-AT-T-TT---A
i Sus_scrofa.CM000824.4                                 I 9 C 0
s Symphalangus_syndactylus.tarseq_24                     13898709 10 +  13920577 AAG-A-AT-G-TT---A
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               3194 10 -      6213 AAG-A-AT-T-TT---A
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               12117 10 +     45698 AAG-A-AT-T-TT---A
i Tamandua_tetradactyla.TamTet_scaffold_26877           I 1 C 0
s Tapirus_indicus.TapInd_scaffold_176                      804124 10 +   1148477 AAT-A-AT-T-TT---A
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  54784 10 +     99546 AAT-A-AT-T-TT---A
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               23456 10 +     42269 AGC-A-AT-T-TT---A
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               56770 10 +     65473 AGC-A-AT-T-TT---A
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194004059 10 - 194193292 AAG-A-AT-G-TT---A
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                   969 10 +      6782 AAG-A-AT-T-TT---A
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  133260 10 -    259118 AAG-A-CT-T-TT---G
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        23133 10 +     38948 AAG-A-AT-G-TT---A
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   16860 10 -     32910 AGG-A-AT-G-TT---A
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       22758 10 +     24652 AAG-A-AT-G-TT---A
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      1636 10 -      3559 AAG-A-AT-G-TT---A
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           39582 10 -     54611 AAG-A-AT-G-TT---A
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       15581 10 +     17312 AAG-A-AT-G-TT---A
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    22944 10 -     25040 AAG-A-AT-G-TT---A
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          1610 10 +      3528 AAG-A-AT-G-TT---A
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  47972 10 +     51589 AAG-A-AT-G-TT---A
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       11147 10 +     14732 AAG-A-AT-G-TT---A
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       1625 10 -     28054 AAG-A-AT-G-TT---A
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44656420 10 -  44834318 AAG-A-AT-G-TT---A
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        1430 10 +      3372 AAG-A-AT-G-TT---A
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   2604 10 +     90398 AAG-A-AT-T-TT---T
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16078713 10 +  31416278 aaa-a-at-t-tt---a
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2788559 11 -   3938065 aaa-aaaa-a-tt---a
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    1096 10 +     13056 AAA-A-AA-A-TT---A
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69310748 10 -  96451834 aag-a-at-t-tt---a
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 23927  5 -     25548 AAA-C-A----------
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 I 2
s Ursus_maritimus.KK498671.1                              6511364 10 +  28682327 AAG-A-AT-T-TT---A
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  2202  8 -     20643 AGG-A-AT-T-T-----
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             21747  8 -     33872 AGG-A-AT-T-T-----
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1522057 10 -   2331223 ctg-a-tt-t-tt---a
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                134512 10 -    281493 AAG-A-AT-T-TT---A
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       123832 10 -    134049 AAG-G-AT-T-TT---A
i Xerus_inauris.XerIna_scaffold_7898                    C 0 I 191
s Zalophus_californianus.ZalCal_flattened_line_4097        211039 10 -    227762 AAG-A-AT-T-TT---A
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           4251 10 -      8775 AAG-A-AT-T-TT---A
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            93631  8 +    112873 I
e Myotis_myotis.MyoMyo_scaffold_6123                         7641  0 +     66751 C
e Myotis_lucifugus.GL429887.1                             3462452  0 -   3747815 C
e Myotis_davidii.KB114863.1                               5016535  6 +   6462685 I
e Myotis_brandtii.KE161952.1                               964866  0 +   8389877 C
e Murina_feae.MurFea_scaffold_2254                          16540  0 -    100666 C
e Lasiurus_borealis.LasBor_scaffold_5102                   111019  7 -    115756 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16291  1 -    119109 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     12283  2 -     20485 I
e Jaculus_jaculus.JH725517.1                              8561873  2 +  11848649 I
e Allactaga_bullata.AllBul_scaffold_70162                    8911  2 -     22067 I
e Heterocephalus_glaber.JH602058.1                        2548028 229 +  31725842 I
e Fukomys_damarensis.KN123630.1                          13889876  0 -  19261668 C
e Dolichotis_patagonum.DolPat_scaffold_14102                33375  0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             56104 16 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                14631 16 +     26546 I
e Cavia_tschudii.CavTsc_scaffold_488                       173989  0 +    436027 C
e Cavia_porcellus.DS562889.1                             15795798  0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15783848 16 -  24422027 I

a score=0.000000
s hg38.chr4_GL000008v2_random                                8683 23 +    209709 AGGA--------A-TGTATA-GG-G--------------GT----T--TC--------TTTT
s Acinonyx_jubatus.LLWD01000356.1                         2030766 20 +   3721120 AGGC--------A-TGTTTA-TA-A--------------GT----T--TC--------T---
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    109046 18 -    189883 ATTT--------A-TGTTTG-GG-T--------------GA----A--T-------------
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10654100 20 +  23371972 ACAC--------A-TGTTTA-TG-C--------------AT----A--TC--------T---
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7090803 20 -  16596857 AGGC--------A-TATTTA-TG-G--------------GT----T--TC--------T---
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allenopithecus_nigroviridis.k141_3103707                  59705 20 +     61638 AGGT--------A-TGTGTA-AG-G--------------GT----T--TC--------T---
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        51513 20 +     53391 AGGC--------A-TGTGTA-AG-G--------------GT----T--TC--------T---
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         2237 20 +     72529 AGGC--------A-TGTGTA-AG-G--------------GT----T--TC--------T---
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          1813 20 +      3797 AGGC--------A-TGTGTA-AG-G--------------GT----T--TC--------T---
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             6992 20 -     18050 AGGC--------A-TGTAAA-GG-G--------------GT----T--TC--------T---
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  8108 20 -     11521 AGGC--------A-TGTAAA-GG-G--------------GT----T--TC--------T---
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              7669 20 -     21359 AGGC--------A-TGTAAA-GG-G--------------GT----T--TC--------T---
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1856473                                6051 20 +      7227 AGGC--------A-TGTAAA-GG-G--------------GT----T--TC--------T---
i Alouatta_juara.k141_1856473                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          6965 20 -     10438 AGGC--------A-TGTAAA-AG-G--------------GT----T--TC--------T---
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            3620 20 +      7047 AGGC--------A-TGTAAA-GG-G--------------GT----T--TC--------T---
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             6907 20 +     10410 AGGC--------A-TGTAAA-GG-G--------------GT----T--TC--------T---
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                             705 20 -      4927 AGGC--------A-TGTAAA-GG-G--------------GT----T--TC--------T---
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             3638 20 +      6429 AGGC--------A-TGTAAA-GG-G--------------GT----T--TC--------T---
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3517522 20 +   4113121 aagc--------a-TGTTTA-TA-G--------------GT----T--TC--------T---
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      387718 19 -    631301 AGGC--------A-T-TTT-GTG-G--------------GT----T--TA--------C---
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            28155 20 +     33004 AAGC--------A-TGTTTA-TA-G--------------GT----T--TC--------A---
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 59352 20 +     78111 AGGC--------A-TGTAAA-GG-G--------------GT----T--TC--------T---
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            2282 20 +     22701 AGGC--------A-TGTAAA-GG-G--------------GT----T--TC--------T---
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5746240 20 +   9889416 AGGC--------A-TGTAAA-Gg-g--------------gt----t--tc--------t---
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             2821 20 -    104377 AGGC--------A-TGTAAA-GG-G--------------GT----T--TC--------T---
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               2830 20 +     23246 AGGC--------A-TGTAAA-GG-G--------------GT----T--TC--------T---
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                      891 18 +      5067 AGGC--------A-CATTTA-GA-G--------------AT----T--T-------------
i Aplodontia_rufa.AprRuf_scaffold_156013                I 196 C 0
s Arctocebus_calabarensis.k141_1161114                      14830 20 +     17483 AGGC--------A-TATTTA-GT-G--------------GG----T--TC--------C---
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 5860 19 -     29036 AGCC--------A-T-GTT-GTG-G--------------AT----T--TG--------C---
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9536093 20 +  39197703 AGGC--------A-TGTAAA-GG-G--------------GT----T--TC--------T---
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             57377 20 +     85812 AGGC--------A-TGTAAA-GG-G--------------GT----T--TC--------T---
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 8376 20 +     89302 AGGC--------A-TGTAAA-GG-G--------------GT----T--TC--------T---
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             12886 20 -     58268 AGGC--------A-TGTAAA-GG-G--------------GT----T--TC--------T---
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             60872 20 +    119057 AGGC--------A-TGTAAA-GG-G--------------GT----T--TC--------T---
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               2823 20 -     25888 AGGC--------A-TGTAAA-GG-G--------------GT----T--TC--------T---
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 3582 15 -     16375 AGGC--------A-TGTTTA-GG-G--------------T----------------------
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_767228                               9531 15 -      9688 AGGC--------A-TGTTTA-GG-G--------------T----------------------
i Avahi_peyrierasi.k141_767228                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26377476 20 +  51448160 aggc--------a-TGTTTA-TG-G--------------GT----T--TC--------T---
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        2707 20 -     13118 aggc--------a-TGTTTA-TG-G--------------GT----T--TC--------T---
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   40622 20 -     72089 AAGC--------A-TGTTTA-TA-G--------------GT----T--TC--------T---
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6556766 20 +   6870073 aagc--------a-TGTTTA-TA-G--------------GT----T--TG--------T---
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138137001 20 - 161108492 aagc--------a-TGTTTA-TA-G--------------GT----T--TG--------T---
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     569378 20 -    998990 aagc--------a-TGTTTA-TA-G--------------GT----T--TG--------T---
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136292734 20 - 158972876 aagc--------a-TGTTTA-TA-G--------------GT----T--TG--------T---
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1228354 20 -   1914593 aaga--------a-tgtttA-TA-G--------------GT----T--TC--------T---
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               110727 20 -    171031 AGGC--------A-CGTAAA-GG-G--------------GT----T--TC--------T---
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                  9753 20 +    125063 AGGC--------A-CGTAAA-GG-G--------------GT----T--TC--------T---
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                11801 20 -    216513 AGGC--------A-CGTAAA-GG-G--------------GT----T--TC--------T---
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        4341 20 -    134917 AGGC--------A-CGTAAA-GG-G--------------GT----T--TC--------T---
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3216986 20 -   8989139 aagc--------a-tgttta-ta-g--------------at----t--tc--------t---
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           394687 20 -  15254737 aagc--------a-tgttta-ta-g--------------at----t--tc--------t---
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2970424 20 +   6889770 aagc--------a-tgttta-ta-g--------------at----t--tc--------t---
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11515477 20 +  39901454 AGGC--------A-TGCTTA-TG-G--------------GT----T--TC--------T---
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   10494 20 +     87036 AGGC--------A-TGCTTA-TG-G--------------GT----T--TC--------T---
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11262136 20 -  35597290 AGGC--------A-TGctta-tg-g--------------gt----t--tc--------t---
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11084665 20 +  39895921 AGGC--------A-TGctta-tg-g--------------gt----t--tc--------t---
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16451699 20 -  44759192 AGGC--------A-Tgctta-tg-g--------------gt----t--tc--------t---
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21322629 20 + 157394656 aagc--------a-TGTTTA-TA-G--------------GT----T--TC--------T---
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135703856 20 - 157403528 aagc--------a-TGTTTA-TA-G--------------GT----T--TC--------T---
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_647363                  1393  9 +      1887 AGAT--------C-TGTG--------------------------------------------
i Capromys_pilorides.CapPil_scaffold_647363             C 0 I 3
s Carlito_syrichta.NW_007248099.1                          305975 27 +    345090 AGCC--------T-TGTTta-ga-g--------------gt----t--t-gtttgtttt---
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               56899 19 +     67245 AGGC--------A-T-TTT-GTG-G--------------GT----T--TG--------C---
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   27398 18 +     33760 GGGA--------A-TATTTA-GA-G--------------AT----T--T-------------
i Castor_canadensis.CasCan_scaffold_47037               C 0 I 1
s Catagonus_wagneri.CatWag_scaffold_1305                   156195 20 -    276539 AGGC--------A-TGTTTA-TG-G--------------GT----T--TC--------T---
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18887567 20 -  29618158 AGGC--------A-TGTAAA-AG-G--------------GT----T--TC--------T---
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 5111 20 -     26817 AGGC--------A-CGTAAA-AG-G--------------GT----T--TC--------T---
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                 9354 20 +     25043 AGGC--------A-TGTAAA-AG-G--------------GT----T--TC--------T---
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         5017 26 +     21754 AGCC--------T-TGTTTA-GA-G--------------GT----T--T--GTTGTGGT---
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4360684 20 +   7569818 agac--------A-TGTTTA-TG-G--------------GT----T--TC--------T---
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623          439 20 -      9338 AGAC--------A-TGTTTA-TG-G--------------GT----T--TC--------T---
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6551501 20 +   6739814 AGGC--------A-TGTgta-ag-g--------------gt----t--tc--------t---
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      52978 20 -     54931 AGGC--------A-TGTGTA-AG-G--------------GT----T--TC--------T---
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         17962 20 -     19697 AGGC--------A-TGTGTA-AG-G--------------GT----T--TC--------T---
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         55493 20 -    107033 AGGC--------A-TGTGTA-AG-G--------------GT----T--TC--------T---
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        1934 20 -      3853 AGGC--------A-TGTGTA-AG-G--------------GT----T--TC--------T---
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          25867 20 +     30494 AGGC--------A-TGTGTA-AG-G--------------GT----T--TC--------T---
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           1891 20 -      4022 AGGC--------A-TGTGTA-AG-G--------------GT----T--TC--------T---
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          1784 20 -      3505 AGGC--------A-TGTGTA-AG-G--------------GT----T--TC--------T---
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           20588 20 +     35983 AGGC--------A-TGTGTA-AG-G--------------GT----T--TC--------T---
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11987110 20 +  12117833 AGGC--------A-TGTGTA-AG-C--------------GT----T--TC--------T---
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46473863 20 +  46592721 AGGC--------A-TGTGTA-AG-G--------------GT----T--TC--------T---
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      31690 20 +     33420 AGGC--------A-TGTGTA-AG-G--------------GT----T--TC--------T---
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        1726 20 -      3443 AGGC--------A-TGTGTA-AG-G--------------GT----T--TC--------T---
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      2717 20 -      4669 AGGC--------A-TGTGTA-AG-G--------------GT----T--TC--------T---
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        2517 20 -      4411 AGGC--------A-TGTGTA-AG-G--------------GT----T--TC--------T---
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         2042 20 -      4205 AGGC--------A-TGTGTA-AG-G--------------GT----T--TC--------T---
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_1070855           259 20 -      1715 AGGC--------A-TGTTTC-AG-G--------------GT----T--AT--------T---
i Chaetophractus_vellerosus.ChaVel_scaffold_1070855     C 0 C 0
s Cheirogaleus_major.k141_1157592                           55884 20 -     68416 AGGC--------A-TGTTTA-GG-G--TTTG---G----T----------------------
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            4933 13 +     13308 AGGC--------A-TGTTTA-GG---------------------------------------
i Cheirogaleus_medius.k141_133808                       C 0 I 3
s Cheracebus_lucifer.k141_619653                             2370 20 -     18223 AGGC--------A-TGTAAA-GG-G--------------GT----T--TC--------T---
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             19393 20 +     25473 AGGC--------A-TGTAAA-GG-G--------------GT----T--TC--------T---
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           38432 20 +     57117 AGGC--------A-TGTAAA-GG-G--------------GT----T--TC--------T---
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          43107 20 +     54541 AGGC--------A-TGTAAA-GG-G--------------GT----T--TC--------T---
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15958766 18 +  43084221 AGGT--------A-TGTATA-GC-A--------------AT----C--T-------------
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         67948 20 +    196370 AGGC--------A-TGTAAA-GG-G--------------GT----T--TC--------T---
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          12129 20 +     40510 AGGC--------A-TGTAAA-GG-G--------------GT----T--TC--------T---
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15135323 20 -  15256731 AGGC--------A-TGTGTA-AG-G--------------GT----T--TC--------T---
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      30369 20 -     53260 AGGC--------A-TGTGTA-AG-G--------------GT----T--TC--------T---
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101140818 20 + 101219884 AGGC--------A-TGTgta-ag-g--------------gt----t--tc--------t---
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                13881 20 -     21363 AGGC--------A-TGTTTC-AG-G--------------AG----T--AT--------T---
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           759187 20 +    964067 AGGC--------A-TGTTTC-AG-G--------------AG----T--AT--------T---
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_141308              5972 20 -     12508 AGAC--------A-TCTTTT-AT-G--------------AG----A--TT--------T---
i Chrysochloris_asiatica.ChrAsi_scaffold_141308         C 0 C 0
s Colobus_angolensis.KN985967.1                          10879397 20 +  10971483 AGGC--------A-TGTgta-ag-g--------------gt----t--tc--------t---
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147660555 20 + 156195979 AGGC--------A-TGTGTA-AG-G--------------GT----T--TC--------T---
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            12541 20 +     23629 AGGC--------A-TGTGTA-AG-G--------------GT----T--TC--------T---
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60610145 20 +  78930452 agac--------a-tcatta-ag-g--------------tt----t--tc--------t---
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         36597 20 -     40477 AGGC--------A-TGTTTA-CA-G--------------AT----T--TT--------C---
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 274483 18 -    399297 ATCA--------A-TGTTTA-GA-T--------------AG----T--T-------------
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53025670 18 +  72327488 AAGC--------A-TGCTTa-ga-t--------------ag----t--t-------------
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             16120 11 -     19186 -----------------TA--AA-G--------------AT----T--TC--------T---
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            48793 20 -     70449 AGTC--------A-TGTTTA-TA-G--------------GT----T--TC--------T---
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  205240 17 -    956709 AGTG--------T-TGC-TA-TG-A--------------AT----T--A-------------
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 27462 14 -     67205 AGAT--------C-TGTATA-GA-A-------------------------------------
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          179070 13 -   6883506 AGGC--------A-TGTTTC-AG---------------------------------------
i Dasypus_novemcinctus.JH568778.1                       C 0 I 6
s Daubentonia_madagascariensis.ctg11                     16841758 15 +  31942871 AGGC--------A-TGTTTA-GG-G--------------T----------------------
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80034222 20 -  96802777 aggc--------a-TGTTTA-TG-G--------------GT----T--TC--------T---
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18696212 19 -  18957592 AGGC--------A-T-TTT-GTG-G--------------GT----T--TG--------C---
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 319346 20 +    993696 agac--------A-TGTTTA-TG-G--------------GT----T--TC--------T---
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_170113                  604 20 +       818 AGAC--------A-TGTTTA-TG-G--------------GT----T--TC--------T---
i Diceros_bicornis.DicBicMic_scaffold_170113            C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   154631 18 +    228994 AGGT--------G-TGTATA-GG-A--------------AT----A--T-------------
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3652385 12 +   4240102 AGGC--------A-TGTTTA-G----------------------------------------
i Dipodomys_ordii.KN672545.1                            C 0 I 5
s Dipodomys_stephensi.DipSte_scaffold_44365                 23939 12 +     28912 AGGC--------A-TGTTTA-G----------------------------------------
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 I 5
s Echinops_telfairi.JH980316.1                           22991477 20 -  44670279 AGGC--------A-TGTTTT-GA-t--------------gg----c--tt--------t---
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                  9586 20 +     24177 aagc--------a-tgtttA-TG-G--------------GT----T--TC--------G---
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1488880 20 +   1727528 AAGC--------A-TGTTTA-TA-G--------------GT----T--TC--------T---
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7803647 34 +  15467074 TGGC--------A-TGTTTC-AT-GAGTTTGTTTGGGTAGG----A--TT--------T---
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        236138 18 -    369425 atct--------a-TCTTTA-GA-C--------------AA----T--T-------------
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           3146 18 -      7838 atct--------a-tgttta-ga-t--------------aa----t--t-------------
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85868525 20 +  99434291 AGGC--------A-TATTTA-TG-G--------------GT----T--TC--------T---
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Equus_asinus.JREZ01000062.1                             5850073 20 -   7175178 AGAC--------A-CGTtta-tg-g--------------gt----t--tc--------t---
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13348576 20 +  41866177 AGAC--------A-CGTtta-tg-g--------------gt----t--tc--------t---
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          10066 20 +     92910 AGAC--------A-CGttta-tg-g--------------gt----t--tc--------t---
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11529663 20 +  16010500 ATGT--------C-TGCTTA-AA-G--------------GT----T--TC--------T---
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48767502 20 -  48907691 AGGC--------A-TGTGTA-AG-G--------------GT----T--TC--------T---
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          312360 20 +    330699 AGGC--------A-TGTTTA-TG-G--------------GT----T--TC--------T---
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             58789 20 +     89355 AGGC--------A-TGTTTA-TG-G--------------GT----T--TC--------T---
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              1959  5 +     13586 AGGC--------A-------------------------------------------------
i Eulemur_albifrons.k141_715837                         C 0 I 1
s Eulemur_collaris.k141_311830                               1895  5 -      6809 AGGC--------A-------------------------------------------------
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             8367  5 +     36558 AGGC--------A-------------------------------------------------
i Eulemur_coronatus.k141_3240342                        C 0 I 1
s Eulemur_flavifrons.k141_903901                             4683  5 +     60246 AGGC--------A-------------------------------------------------
i Eulemur_flavifrons.k141_903901                        C 0 I 1
s Eulemur_fulvus.k141_653297                                 8171  5 +    109717 AGGC--------A-------------------------------------------------
i Eulemur_fulvus.k141_653297                            C 0 I 1
s Eulemur_macaco.k141_1341545                               12545  5 +     16540 AGGT--------A-------------------------------------------------
i Eulemur_macaco.k141_1341545                           C 0 I 1
s Eulemur_mongoz.k141_825972                                12822  5 +     27497 AGGC--------A-------------------------------------------------
i Eulemur_mongoz.k141_825972                            C 0 I 1
s Eulemur_rubriventer.k141_411740                           15283  5 +     26808 AGGC--------A-------------------------------------------------
i Eulemur_rubriventer.k141_411740                       C 0 I 1
s Eulemur_rufus.k141_1620292                                30011  5 +     46535 AGGC--------A-------------------------------------------------
i Eulemur_rufus.k141_1620292                            C 0 I 1
s Eulemur_sanfordi.k141_186399                              12734  5 -     29447 AGGC--------A-------------------------------------------------
i Eulemur_sanfordi.k141_186399                          C 0 I 1
s Felis_catus.CM001386.2                                129889746 20 - 159252932 AGGC--------A-TGTTTA-TA-A--------------GT----T--TC--------T---
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129276820 20 - 158578461 AGGC--------A-TGTTTA-TA-A--------------GT----T--TC--------T---
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 17955 20 +     52776 AGGC--------A-TGTTTA-TA-A--------------GT----T--TC--------T---
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Galago_moholi.ctg555                                     207903 20 -    847004 AGGC--------A-TATTTA-GT-G--------------GG----T--TC--------T---
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           10283 20 -     43889 AGGC--------A-TATTTA-GT-G--------------GG----T--TC--------T---
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           7335 18 +     27357 AGGC--------A-TATTTA-GT-G--------------GG----T--T-------------
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               153200 20 +    324696 AGGC--------A-TGTTTG-GG-T--------------TT----T--TT--------T---
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    178405 20 -    189561 aagc--------a-TGTTTA-TA-G--------------GT----T--GC--------T---
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                            9607 18 -     18683 AGGC--------A-TGCTTA-GA-G--------------AT----T--T-------------
i Glis_glis.GliGli_scaffold_79770                       C 0 I 1
s Gorilla_beringei.k141_111300                               2078 23 -     14630 AGGC--------A-TGTACA-GG-G--------------GT----T--TC--------TTTT
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119649176 23 - 195582420 AGGC--------A-TGTACa-gg-g--------------gt----t--tc--------tttt
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   74165 11 +    118900 ----------------CTTA-GA-G--------------AT----T--T-------------
i Graphiurus_murinus.GraMur_scaffold_4493               I 3 I 1
s Hapalemur_alaotrensis.k141_1198205                         2500 15 +      3980 AGGC--------A-TGTTTA-GG-G--------------T----------------------
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             24980 15 +     26611 AGGC--------A-TGTTTA-GG-G--------------T----------------------
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             2434 15 +     56096 AGGC--------A-TGTTTA-GG-G--------------T----------------------
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        25707 15 -     42470 AGGC--------A-TGTTTA-GG-G--------------t----------------------
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        42304 15 -     54384 AGGC--------A-TGTTTA-GG-G--------------t----------------------
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              14000 20 +     53719 AGGC--------A-TGTTTA-TA-G--------------GG----G--GT--------T---
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                24891 20 -     91191 AAGC--------A-TGTATA-TA-G--------------GT----T--TC--------T---
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               53480 21 +     73687 AGGT--------G-TGTTTC-AT-G--------------GG----T--CT-------CT---
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              144471 20 +    277961 AGGT--------G-TCTTTA-CA-G--------------GT----T--TC--------T---
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      275891 20 -    477199 aggC--------A-TGTTTA-CA-G--------------GT----T--TC--------C---
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              5047 20 -      9143 AGGC--------A-TGTTTA-CA-G--------------GT----T--TC--------T---
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg649                                    98748 23 +    115816 AGGC--------A-TGTATA-GG-G--------------GT----T--TC--------TTTT
i Hoolock_leuconedys.ctg649                                C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 13068 12 -     67322 AGGC--------A-TCTTTA-T----------------------------------------
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 I 6
s Hylobates_abbotti.k141_493872                              1885 23 +      5897 AGGC--------A-TGTATA-GG-G--------------GT----T--TC--------TTTT
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_282275                               1098 23 +      1846 AGGC--------A-TGTATA-GG-G--------------GT----T--TC--------TTTT
i Hylobates_agilis.k141_282275                          C 0 C 0
s Hylobates_klossii.k141_584463                               262 23 -      1009 AGGC--------A-TGTATA-GG-G--------------Gt----t--tc--------tttt
i Hylobates_klossii.k141_584463                         C 0 C 0
s Hylobates_muelleri.k141_1133650                            1320 23 -      2775 AGGC--------A-TGTATA-GG-G--------------Gt----t--tc--------tttt
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             29923 23 -     60944 AGGC--------A-TGTATA-GG-G--------------Gt----t--tc--------tttt
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     3116 18 +     22540 AGGT--------A-TGTATA-GA-A--------------AT----T--T-------------
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7123010 18 +  13083262 aggc--------a-tgTTTA-AA-G--------------AC----T--T-------------
i Ictidomys_tridecemlineatus.JH393315.1                 I 186 C 0
s Indri_indri.k141_3334527                                   8949 15 +      9207 AGGC--------A-TGTTTA-GG-G--------------T----------------------
i Indri_indri.k141_3334527                              C 0 N 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               6148 20 +     17520 AGGC--------A-TGTTTA-TG-G--------------GT----T--TC--------T---
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               20982 20 +     37189 AGGC--------A-TGTTTA-TG-G--------------GT----T--TC--------C---
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          46946 20 -    147782 AGGC--------A-TGTAAA-GG-G--------------GT----T--TC--------T---
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lemur_catta.scaffold_1                                258403986 15 - 285822530 AGGC--------A-TGTTTA-GG-G--------------T----------------------
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        20884 15 +     39228 AGGC--------A-CGTTTA-AG-G--------------G----------------------
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            50258 15 +     63517 AGGC--------A-CGTTTA-AG-G--------------G----------------------
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        75480 15 +    116806 AGGC--------A-TGTTTA-AG-G--------------G----------------------
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     28521 15 -     33031 AGGC--------A-CGTTTA-AG-G--------------G----------------------
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3082767 20 -   3498232 AGGC--------A-TGttta-tg-g--------------gt----t--tc--------t---
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                     9971 20 +     22452 AAGC--------A-TATTTA-GG-T--------------AT----T--TC--------C---
i Lepus_americanus.LepAme_scaffold_62849                C 0 I 3
s Lipotes_vexillifer.KE558548.1                            133324 20 +   3060487 aggc--------a-TGTTTA-TG-G--------------GT----T--TC--------T---
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19244589 20 +  19376315 AGGC--------A-TGTGTA-AG-G--------------GT----T--TC--------T---
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            7634 20 +     84689 AGGC--------A-TATTTA-GT-G--------------GG----T--TC--------T---
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3775385 20 +   6799190 AGGC--------A-TATTTA-GT-G--------------GG----T--TC--------T---
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20588242 20 -  62548349 AGGC--------A-TGtcca-tt-g--------------gg----t--tt--------t---
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11084121 20 +  39895028 AGGC--------A-TGctta-tg-g--------------gt----t--tc--------t---
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             16272 20 +     74745 AGGC--------A-TGTGTA-AG-G--------------GT----T--TC--------T---
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12702778 20 +  12821369 AGGT--------A-TGTGTA-AG-G--------------GT----T--TC--------T---
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               4874 20 +      6569 AGGC--------A-TGTGTA-AG-G--------------GT----T--TC--------T---
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           43175 20 +     63263 AGGC--------A-TGTGTA-AG-G--------------TT----T--TC--------T---
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_1068107                               11751 20 +     12679 AGGC--------A-TGTGTA-AG-G--------------GT----T--TC--------T---
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                1324 20 +      3017 AGGC--------A-TGTGTA-AG-G--------------GT----T--TC--------T---
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  42936 20 -     79256 AGGC--------A-TGTGTA-AG-G--------------GT----T--TC--------T---
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196031854 20 + 196197964 AGGC--------A-TGTgta-ag-g--------------gt----t--tc--------t---
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11441960 20 +  11645122 AGGC--------A-TGTgta-ag-g--------------gt----t--tc--------t---
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   1883 20 -     46448 AGGC--------A-TGTGTA-AG-G--------------GT----T--TC--------T---
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                1713 20 -      3617 AGGC--------A-TGTGTA-AG-G--------------GT----T--TC--------T---
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 12046 20 -     55006 AGGC--------A-TGTGTA-AG-G--------------GT----T--TC--------T---
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43837083 20 +  43892939 AGGC--------A-TGTGTA-AG-G--------------GT----T--TC--------T---
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                4306 20 -      5978 AGGC--------A-TGTGTA-AG-G--------------GT----T--TC--------T---
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               1888 20 -     27140 AGGC--------A-TGTGTA-AG-G--------------GT----T--TC--------T---
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43433749 20 -  43563597 AGGC--------A-TGTGTA-AG-G--------------GT----T--TC--------T---
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4446575 20 -   4543643 AGGC--------A-TGTGTA-AG-G--------------GT----T--TC--------T---
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            143381 20 +    252755 TGGC--------A-TGTTTA-TG-A--------------GT----T--TC--------T---
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             33448 20 +     58827 TGGC--------A-TGTTTA-TG-A--------------GT----T--TC--------T---
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36870854 18 +  64221397 aggc--------a-TGTTTA-AA-G--------------AC----T--T-------------
i Marmota_marmota.CZRN01000005.1                        I 183 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       61655 20 -    234502 AGGC--------A-TGTTTA-CG-G--------------GT----T--TC--------C---
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_1828            226023 20 -    226874 AGGC--------A-TATTTA-TG-G--------------GT----T--TC--------T---
i Mellivora_capensis.MelCap_flattened_line_1828         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233                8595 18 +     15977 ATTC--------A-TGCTTG-GA-T--------------AG----T--T-------------
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1043400 18 -  26018355 ATCC--------A-TTCTTT-GA-T--------------AA----G--T-------------
i Mesocricetus_auratus.KB708139.1                       C 0 I 6
s Mesoplodon_bidens.MesBid_scaffold_183284                   1020 20 +      2166 AGGC--------A-TGTTTA-TG-G--------------GT----T--TC--------T---
i Mesoplodon_bidens.MesBid_scaffold_183284              C 0 C 0
s Microcebus_murinus.CM007691.1                          16507103 15 +  47401472 aagc--------a-tgttta-gg-g--------------t----------------------
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  28425 20 -     48017 AGAC--------A-TGTTTT-AA-G--------------GG----C--TT--------T---
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               20060 19 -     32043 GGGC--------A-T-TTT-GTG-G--------------GT----T--TG--------A---
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22816287 18 -  98408828 atct--------a-TGTTTA-GA-T--------------AG----T--T-------------
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8206786 20 +  10048721 aggc--------A-TGTTT-CTG-G--------------GT----T--TG--------T---
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            31467 20 +     45743 AGGC--------A-TGTTT-CTG-G--------------GT----T--TG--------T---
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        32404 20 +     34273 AGGC--------A-TGTGTA-AG-G--------------GT----T--TC--------T---
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         8065 20 -    104932 AGGC--------A-TGTTTA-TG-G--------------GT----T--TC--------T---
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     2516 15 +      8497 AAGC--------A-TGTTTA-GG-G--------------T----------------------
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 143747 20 +    154973 AGGC--------A-TATTTA-TG-G--------------GT----T--TC--------T---
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                158596 20 +    265003 AGGT--------A-TGTTT-ATG-G--------------GT----T--TG--------C---
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 1990 20 -      4346 AAGC--------A-TGTTTA-TA-G--------------GT----T--TA--------G---
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  141694 14 -    168139 ---------------GTTTA-TA-G--------------GT----T--CC--------T---
i Mungos_mungo.MunMun_flattened_line_8729               I 4 C 0
s Mus_caroli.LT608236.1                                  70763011 17 +  92629107 aaag--------A-TGTTTG-G--T--------------AG----A--T-------------
i Mus_caroli.LT608236.1                                 I 878 I 6
s Mus_musculus.chr16                                     75486084 18 +  98207768 atct--------A-TGTTTG-G-AT--------------AG----A--T-------------
i Mus_musculus.chr16                                    I 830 I 6
s Mus_pahari.LT608305.1                                  67552248 18 +  89017189 atct--------a-TGTTTG-GA-T--------------AG----A--G-------------
i Mus_pahari.LT608305.1                                 I 2675 I 6
s Mus_spretus.CM004110.1                                 74327274  4 +  97876770 ---------------------------------------NN----N--N-------------
i Mus_spretus.CM004110.1                                I 2599 I 6
s Muscardinus_avellanarius.MusAve_scaffold_9643              8114 22 +     98495 AGGC--------A-TACTTA-AA-G--------------ATTGTTT--T-------------
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 I 1
s Mustela_putorius.JH417978.1                             4420910 20 -  28371801 AGGC--------A-TATTTA-TG-G--------------GC----T--TC--------T---
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     87081 20 -    117718 AGAT--------C-TCTATA-GA-A-GCAT---------AC---------------------
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             2453 20 -      8794 AGGC--------A-TGTTTC-TA-G--------------AT----T--TT--------T---
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL204535.1                           2056841 18 +   2354432 TGCC--------A-TGTTAA-CG-A--------------TT----T--T-------------
i Nannospalax_galili.KL204535.1                         n 25 C 0
s Nasalis_larvatus.k141_153429                               4785 20 +     48152 AGGC--------A-TGTGTA-AG-G--------------GT----T--TC--------T---
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4481666 20 -  14209539 AGGC--------A-TGttta-tg-g--------------gt----t--tc--------t---
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3948356 20 -   4490290 aggc--------a-TGTTTA-TG-G--------------GT----T--TC--------T---
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  46713 20 +     94413 AGAC--------A-TGTTT-CTG-G--------------GT----T--TG--------C---
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1223136                          10554 23 -     11253 AGGC--------A-TGTATA-GG-G--------------GT----T--GC--------TTTT
i Nomascus_annamensis.k141_1223136                      C 0 C 0
s Nomascus_concolor.k141_190193                               809 23 -      1094 AGGC--------A-TGTATA-GG-G--------------GT----T--TC--------TTTT
i Nomascus_concolor.k141_190193                         I 138 n 23
s Nomascus_gabriellae.k141_906566                            1186 23 -      2544 AGGC--------A-TGTATA-GG-G--------------GT----T--GC--------TTTT
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             21660 23 -  18771707 AGGC--------A-TGTATA-GG-G--------------Gt----t--tc--------tttt
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_844529                                   934 23 +      2124 AGGC--------A-TGTATA-GG-G--------------GT----T--GC--------TTTT
i Nomascus_siki_a.k141_844529                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                27116 20 +   3668941 AGGC--------A-TGctta-tg-g--------------gt----t--tc--------t---
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65563964 20 -  95554990 AGAC--------A-TGTTTC-GT-G--------------GG----T--TC--------T---
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                             809 20 +      6470 AGAC--------A-TGTTTC-GT-G--------------GG----T--TC--------T---
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65666333 20 +  89412551 AGGC--------A-TGTTTT-GT-G--------------GG----T--TC--------T---
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4992652 20 -  23139505 AAGC--------A-TATTTA-GG-G--------------GT----T--TC--------C---
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3678740  3 +  10294119 ------------c-tg----------------------------------------------
i Octodon_degus.JH651621.1                              I 574 I 1836
s Odobenus_rosmarus.KB229369.1                             676324 20 -   3126709 AGGC--------A-TGTTTA-TG-G--------------GT----T--CC--------T---
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1077113 20 +   1425656 AAGC--------A-TGTTTA-TA-G--------------GT----T--TC--------T---
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         34277 20 +     78940 aagc--------a-TGTTTA-TA-G--------------GT----T--GC--------T---
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  121620 18 +    145789 ATCT--------A-TGTTTA-GA-T--------------AG----T--T-------------
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  33560 18 +     62360 ATCC--------A-TGTTCA-GA-C--------------AG----T--T-------------
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7222040 20 -   7562323 aggc--------a-TGTTTA-TG-G--------------GT----T--TC--------T---
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              40494 28 -     66828 AGACATAGAGACA-TATTCC-AT-G--------------GG----G--TT--------T---
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141872620 20 + 163896628 AAGC--------A-TATTTA-gg-c--------------at----t--tc--------c---
i Oryctolagus_cuniculus.CM000803.1                      C 0 I 3
s Otocyon_megalotis.JAEUCK010005121.1                      304452 20 -    505867 AGGC--------A-TGctta-tg-g--------------gt----t--tc--------t---
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       35971 20 +     38679 AGGC--------A-TATTTA-GC-G--------------GG----T--TC--------T---
i Otolemur_crassicaudatus.k141_321880                   C 0 I 1
s Otolemur_garnettii.GL873528.1                          18005412 20 -  38779656 AGGC--------A-TATTta-gt-g--------------gg----t--tc--------t---
i Otolemur_garnettii.GL873528.1                         C 0 I 1
s Ovis_aries.CM001582.2                                 134074693 20 - 275406953 aagc--------a-TGTTTA-TA-G--------------GT----T--TC--------T---
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      75907 20 +    140051 AAGC--------A-TGTTTA-TA-G--------------GT----T--TC--------T---
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127571418 23 - 205426864 AGGC--------A-TGTATA-gg-g--------------gt----t--tc--------tttt
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120148565 23 - 196562556 AGGC--------A-TGTATA-gg-g--------------gt----t--tc--------tttt
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  30913 20 +    295523 AGGC--------A-TGTTTA-TA-A--------------GT----T--TC--------T---
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3634516 20 +  18214204 AGGC--------A-TGTTTA-TA-A--------------GT----T--TC--------T---
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5024294 20 -   6340057 AGGC--------A-Tgttta-tc-a--------------gt----t--tc--------t---
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1063551 20 -   1292953 aagc--------a-TGTTTA-TA-G--------------GT----T--TC--------T---
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188152533 20 - 188283584 AGGC--------A-TGTgta-ag-g--------------gt----t--tc--------t---
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            48745 20 +     76494 AGGC--------A-TGTGTA-AG-G--------------GT----T--TC--------T---
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47509930 20 +  47705337 AGGC--------A-TGTGTA-AG-G--------------GT----T--TC--------T---
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 63912 20 -    104429 AGGC--------A-TGTGTA-AG-G--------------GT----T--TC--------C---
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  13698 20 -     29451 AGGC--------A-TGTGTA-AG-G--------------GT----T--TC--------T---
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                34101 20 +     35859 AGGC--------A-TGTGTA-AG-G--------------GT----T--TC--------T---
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    112476 20 -    135482 AGGT--------G-TGTTTA-TA-G--------------GT----T--TC--------T---
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           2029 18 -     23713 AGGC--------A-CATTTA-GT-G--------------GG----T--T-------------
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            21326 18 -     27972 AGGC--------A-CATTTA-GT-G--------------GG----T--T-------------
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      39927 18 -     45160 AGGC--------A-TGTTTA-GA-G--------------AG----T--T-------------
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 I 1
s Peromyscus_maniculatus.KI615518.1                       4946734 18 -   8017169 ATCC--------A-TGTTTA-GA-C--------------AG----T--T-------------
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            118657 20 -    122454 AGGC--------A-TGTTTA-TG-G--------------GT----T--TC--------T---
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           1786 20 -      3310 AGGC--------A-TGTGTA-AG-G--------------GT----T--TC--------T---
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       21692 20 -     82327 AGGC--------A-TGTGTA-AG-G--------------GT----T--TC--------T---
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           18444 20 +     19957 AGGC--------A-TGTGTA-AG-G--------------GT----T--TC--------T---
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26736453 20 +  26888534 AGGC--------A-TGTgta-ag-g--------------gt----t--tc--------t---
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pithecia_albicans.k141_991845                             40440 20 -     61926 AGGC--------A-TGTAAA-GG-G--------------GT----T--TC--------T---
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        21869 20 +     78826 AGGC--------A-TGTAAA-GG-G--------------GT----T--TC--------T---
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              5820 20 -     15800 AGGC--------A-TGTAAA-GG-G--------------GT----T--TC--------T---
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                         9018 20 -     16101 AGGC--------A-TGTAAA-GG-G--------------GT----T--TC--------T---
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          2327 20 +      9673 AGGC--------A-TGTAAA-GG-G--------------GT----T--TC--------T---
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13471321 20 -  19735023 AGGC--------A-TGTAAA-GG-G--------------GT----T--TC--------T---
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           10229 20 -     31692 AGGC--------A-TGTAAA-GG-G--------------GT----T--TC--------T---
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           2724 20 +     21690 AGGT--------A-TGTTTA-TG-G--------------GT----T--TC--------T---
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       19636 20 +     44506 AGGC--------A-TGTAAA-GG-G--------------GT----T--TC--------T---
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        19846 20 +     67491 AGGC--------A-TGTAAA-GG-G--------------GT----T--TC--------T---
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      10091 20 -     98129 AGGC--------A-TGTAAA-GG-G--------------GT----T--TC--------T---
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     19692 20 +    147771 AGGC--------A-TGTAAA-GG-G--------------GT----T--TC--------T---
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        19942 20 -     23762 AGGC--------A-TGTAAA-GG-G--------------GT----T--TC--------T---
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                           408 20 -     55515 AGGC--------A-TGTAAA-GG-G--------------GT----T--TC--------T---
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         19761 20 +    152463 AGGC--------A-TGTAAA-GG-G--------------GT----T--TC--------T---
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      6521 20 +      8943 AAGC--------A-TGTAAA-GG-G--------------GT----T--TC--------T---
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                          9481 20 +    134592 AGGC--------A-TGTAAA-GG-G--------------GT----T--TC--------T---
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          20071 20 -     75465 AGGC--------A-TGTAAA-GG-G--------------GT----T--TC--------T---
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              183972 23 -    373494 AGGC--------A-TGCATa-gg-g--------------gt----t--tc--------tttt
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19803876 23 +  19899266 AGGC--------A-TGCATA-GG-G--------------GT----T--TC--------TTTT
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               2023 20 -     15069 AGGC--------A-TGTGTA-AG-G--------------GT----T--TC--------T---
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              2157 20 +     14865 AGGC--------A-TGTGTA-AG-G--------------GT----T--TC--------T---
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                73344 21 +     78963 AGGT--------G-TGTTTC-AT-G--------------GG----T--CT-------CT---
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6845360 15 +  12164890 AGGC--------A-TGTTta-gg-a--------------t----------------------
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     13828 15 -     30946 aggc--------a-tgttta-gg-g--------------t----------------------
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                          511 15 +     11805 AGGC--------A-TGTTTA-GG-G--------------T----------------------
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           39842 15 +     52369 AGGC--------A-TGTTTA-GG-G--------------T----------------------
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         32230 15 -     44753 AGGC--------A-TGTTTA-GG-G--------------T----------------------
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            14152 15 +     27322 AGGC--------A-TGTTTA-GG-G--------------T----------------------
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       13794 15 -     53241 AGGC--------A-TGTTTA-CG-G--------------T----------------------
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         36066 15 -     48185 AGGC--------A-TGTTTA-GG-G--------------T----------------------
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           30124 18 +     77221 ATTC--------A-TGCTTG-GA-T--------------AG----T--T-------------
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            1263 20 -     27784 aggc--------a-tgttt-gtg-t--------------tt----t--tg--------c---
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        242790 20 -    344369 AGGC--------A-TATTTA-TG-G--------------GT----T--TC--------T---
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13243383 20 -  17261082 aagc--------a-tgtttA-TG-G--------------GT----T--TC--------C---
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             601336 20 -   3946241 aagc--------a-tgttTA-TG-G--------------GT----T--TC--------C---
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131531106 20 - 161321710 AGGC--------A-TGTTTA-TA-A--------------GT----T--TC--------T---
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             26147 21 +     56732 AGGC--------A-TGTGTA-AG-G--------------GTT---T--TT--------T---
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6802637 20 +   6970761 AGGC--------A-TGTGTA-AG-G--------------GT----T--TT--------T---
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             2029 20 +     18040 AGGC--------A-TGTGTA-AG-G--------------GT----T--TT--------T---
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                13199 20 +     68503 AAGC--------A-TGTTTA-TA-G--------------GT----T--TC--------T---
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13912167 18 +  90463843 atct--------A-TGTTTG-GA-T--------------AG----T--T-------------
i Rattus_norvegicus.chr11                               I 663 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1784980 18 +   2252614 aggc--------A-TGTTA---C-G--------------GT----T--TC--------C---
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           12585 20 -     14454 AGGC--------A-TGTGTA-AG-G--------------GT----T--TC--------T---
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206373911 20 - 206558726 AGGC--------A-TGTgta-ag-g--------------gt----t--tc--------t---
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44851559 20 -  45163003 AGGC--------A-TGTGTA-AG-G--------------GT----T--TC--------T---
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                16685 20 +    109198 AAGC--------A-TGTTTA-TA-G--------------GC----T--TC--------C---
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       4981 20 +     12214 AAGC--------A-TGTTTA-TA-G--------------GT----T--TC--------T---
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15669529 20 -  43202129 AGGC--------A-TGTAAA-GG-G--------------GT----T--TC--------T---
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        1395 20 +     34089 AGGC--------A-TGTAAA-GG-G--------------GT----T--TC--------T---
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              1338 20 -     60842 AGGC--------A-TGTAAA-GG-G--------------GT----T--TC--------T---
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              1415 20 +     67014 AGGC--------A-TGTAAA-GG-G--------------GT----T--TC--------T---
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              1411 20 +     60816 AGGC--------A-TGTAAA-GG-G--------------GT----T--TC--------T---
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 1348 20 -     76454 AGGC--------A-TGTAAA-GG-G--------------GT----T--TC--------T---
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17337871 20 -  30362882 AGGC--------A-TGTAAA-AG-G--------------GT----T--TC--------T---
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         17471 20 -     62485 AGGC--------A-TGTAAA-AG-G--------------GT----T--TC--------T---
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   28739 20 -    114521 AGAA--------A-TCTTTA-AG-G--------------TT----T--TC--------T---
i Scalopus_aquaticus.ScaAqu_scaffold_9300               I 3 C 0
s Semnopithecus_entellus.k141_1527475                       24572 20 +     26421 AGGC--------A-TGTGTA-AG-G--------------GT----T--TC--------T---
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       5033 20 +     20762 AGGC--------A-TGTGTA-AG-G--------------GT----T--TC--------T---
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         38767 20 +     40653 AGGC--------A-TGTGTA-AG-G--------------GT----T--TC--------T---
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                            9325 20 -     12194 AGGC--------A-TGTGTA-AG-G--------------GT----T--TC--------T---
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     22745 20 -     27512 AGGC--------A-TGTGTA-AG-G--------------GT----T--TC--------T---
i Semnopithecus_schistaceus.k141_653647                 C 0 I 2
s Semnopithecus_vetulus.k141_642050                         31766 20 -     33692 AGGC--------A-TGTGTA-AG-G--------------GT----T--TC--------T---
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   96349 17 -    120886 AT-C--------A-TATCTA-GA-T--------------AG----C--T-------------
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            15251 20 +    739146 AGAC--------A-TGTTTA-AA-G--------------AT----T--TC--------T---
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17747639 11 -  27805282 -----------------TTA-AA-G---------------T----T--TT--------T---
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2236930 18 +   2842873 aggc--------a-tgTTTA-AA-G--------------AC----T--T-------------
i Spermophilus_dauricus.KZ294190.1                      I 182 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             231787 20 -    276980 AGGC--------A-TATTTA-TG-G--------------GT----T--TC--------T---
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            24357 20 +     62062 AGGC--------A-TGTTTA-TA-G--------------GT----T--TC--------T---
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189269263 19 + 218635234 AG-C--------A-TATTTA-TG-G--------------GT----T--TC--------T---
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                     13898719 23 +  13920577 AGGC--------A-TGTATA-GG-G--------------GT----T--TC--------TTTT
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               3204 19 -      6213 AGGC--------A-TGTTT--TG-G--------------GT----T--TG--------C---
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               12127 20 +     45698 AGGC--------A-TGTTTC-TA-G--------------AT----T--TT--------T---
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      804134 20 +   1148477 AAAC--------A-TGTTCA-TG-G--------------AT----T--TC--------T---
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  54794 20 +     99546 AAAC--------A-TGTTCA-TG-G--------------AT----T--TC--------T---
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               23466 14 +     42269 AGCC--------T-TGTTTA-GA-G-------------------------------------
i Tarsius_lariang.k141_609102                           C 0 I 5
s Tarsius_wallacei.k141_48636                               56780 14 +     65473 AGCC--------T-TGTTTA-GA-G-------------------------------------
i Tarsius_wallacei.k141_48636                           C 0 I 5
s Theropithecus_gelada.CM009951.1                       194004069 20 - 194193292 AGGC--------A-TGTgta-ag-g--------------gt----t--tc--------t---
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                   979 20 +      6782 AGGC--------A-TGTTTC-AG-G--------------GG----T--AA--------T---
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  133270 19 -    259118 AGGC--------A-T-TTT-GTG-G--------------GT----T--TC--------C---
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        23143 20 +     38948 AGGC--------A-TGTGTA-AG-G--------------GT----T--TC--------T---
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   16870 20 -     32910 AGGC--------A-TGTGTA-AG-G--------------GT----T--TC--------T---
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       22768 20 +     24652 AGGC--------A-TGTGTA-AG-G--------------GT----T--TC--------T---
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      1646 20 -      3559 AGGC--------A-TGTGTA-AG-G--------------GT----T--TC--------T---
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           39592 20 -     54611 AGGC--------A-TGTGTA-AG-G--------------GT----T--TC--------T---
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       15591 20 +     17312 AGGC--------A-TGTGTA-AG-G--------------GT----T--TC--------T---
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    22954 20 -     25040 AGGC--------A-TGTGTA-AG-G--------------GT----T--TC--------T---
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          1620 20 +      3528 AGGC--------A-TGTGTA-AG-G--------------GT----T--TC--------T---
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  47982 20 +     51589 AGGC--------A-TGTGTA-AG-G--------------GT----T--TC--------T---
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       11157 20 +     14732 AGGC--------A-TGTGTA-AG-G--------------GT----T--TC--------T---
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       1635 20 -     28054 AGGC--------A-TGTGTA-AG-G--------------GT----T--TC--------T---
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44656430 20 -  44834318 AGGC--------A-TGTGTA-AG-G--------------GT----T--TC--------T---
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        1440 20 +      3372 AGGC--------A-TGTGTA-AG-G--------------GT----T--TC--------T---
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   2614 20 +     90398 AGGC--------A-TGTTGA-CA-G--------------AT----T--TC--------T---
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16078723 17 +  31416278 aggc--------a-TGTTTC-AC-G--------------GT----T----------------
i Trichechus_manatus.JH594618.1                         C 0 I 1
s Tupaia_chinensis.KB320831.1                             2788570 19 -   3938065 agat--------a-tacttg-aa-a--------------g-----t--tt--------t---
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    1106 21 +     13056 AGAT--------A-TACTTG-AA-A--------------G-----TGTTT--------T---
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69310758 20 -  96451834 aggc--------a-TGTTTA-TG-G--------------GT----T--TC--------T---
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 23934 20 -     25548 AAAC--------A-TCTATA-AG-A--------------TT----T--TC--------T---
i Uropsilus_gracilis.UroGra_scaffold_4143_0             I 2 C 0
s Ursus_maritimus.KK498671.1                              6511374 20 +  28682327 ACAC--------A-TGTTTA-TG-A--------------GT----T--TC--------T---
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  2210 10 -     20643 ------------A-CTTATC-A--t--------------t----------------------
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             21755 11 -     33872 ------------A-CTTATC-At-t--------------t----------------------
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1522067 20 -   2331223 aagc--------a-tgttta-ta-g--------------at----t--tc--------t---
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                134522 20 -    281493 AGGC--------A-TGCTTA-TG-G--------------GT----T--TC--------T---
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       124033 18 -    134049 AGGA--------A-TGTTTA-GA-G--------------AT----T--T-------------
i Xerus_inauris.XerIna_scaffold_7898                    I 191 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        211049 20 -    227762 AGGC--------A-TGTTTA-TG-G--------------GT----T--TC--------T---
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           4261 20 -      8775 AGGC--------A-TGTTTA-TG-G--------------GT----T--TC--------T---
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            93631  8 +    112873 I
e Myotis_myotis.MyoMyo_scaffold_6123                         7641  0 +     66751 C
e Myotis_lucifugus.GL429887.1                             3462452  0 -   3747815 C
e Myotis_davidii.KB114863.1                               5016535  6 +   6462685 I
e Myotis_brandtii.KE161952.1                               964866  0 +   8389877 C
e Murina_feae.MurFea_scaffold_2254                          16540  0 -    100666 C
e Lasiurus_borealis.LasBor_scaffold_5102                   111019  7 -    115756 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16291  1 -    119109 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     12283  2 -     20485 I
e Jaculus_jaculus.JH725517.1                              8561873  2 +  11848649 I
e Allactaga_bullata.AllBul_scaffold_70162                    8911  2 -     22067 I
e Heterocephalus_glaber.JH602058.1                        2548028 229 +  31725842 I
e Fukomys_damarensis.KN123630.1                          13889876  0 -  19261668 C
e Dolichotis_patagonum.DolPat_scaffold_14102                33375  0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             56104 16 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                14631 16 +     26546 I
e Cavia_tschudii.CavTsc_scaffold_488                       173989  0 +    436027 C
e Cavia_porcellus.DS562889.1                             15795798  0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15783848 16 -  24422027 I

a score=0.000000
s hg38.chr4_GL000008v2_random                                8706 2 +    209709 TT
s Gorilla_beringei.k141_111300                               2101 2 -     14630 TT
i Gorilla_beringei.k141_111300                          C 0 I 1
s Gorilla_gorilla.LT578340.1                            119649199 2 - 195582420 tt
i Gorilla_gorilla.LT578340.1                            C 0 I 1
s Hoolock_leuconedys.ctg649                                    98771 2 +    115816 TT
i Hoolock_leuconedys.ctg649                                C 0 I 3
s Hylobates_abbotti.k141_493872                              1908 2 +      5897 TT
i Hylobates_abbotti.k141_493872                         C 0 I 3
s Hylobates_agilis.k141_282275                               1121 2 +      1846 TT
i Hylobates_agilis.k141_282275                          C 0 I 3
s Hylobates_klossii.k141_584463                               285 2 -      1009 tt
i Hylobates_klossii.k141_584463                         C 0 I 3
s Hylobates_muelleri.k141_1133650                            1343 2 -      2775 tt
i Hylobates_muelleri.k141_1133650                       C 0 I 3
s Hylobates_pileatus_a.tarseq_592                             29946 2 -     60944 tt
i Hylobates_pileatus_a.tarseq_592                         C 0 I 3
s Nomascus_annamensis.k141_1223136                          10577 2 -     11253 TT
i Nomascus_annamensis.k141_1223136                      C 0 I 3
s Nomascus_concolor.k141_468488                              1220 2 -      1482 TT
i Nomascus_concolor.k141_468488                         I 23 I 3
s Nomascus_gabriellae.k141_906566                            1209 2 -      2544 TT
i Nomascus_gabriellae.k141_906566                       C 0 I 3
s Nomascus_siki_b.tarseq_80                             21683 2 -  18771707 tt
i Nomascus_siki_b.tarseq_80                         C 0 I 3
s Nomascus_siki_a.k141_844529                                   957 2 +      2124 TT
i Nomascus_siki_a.k141_844529                             C 0 I 3
s Pan_paniscus.CM003386.1                               127571441 2 - 205426864 tt
i Pan_paniscus.CM003386.1                               C 0 I 1
s Pan_troglodytes.CM009241.2                            120148588 2 - 196562556 tt
i Pan_troglodytes.CM009241.2                            C 0 I 1
s Pongo_abelii.NDHI03003816.1                              183995 2 -    373494 tt
i Pongo_abelii.NDHI03003816.1                           C 0 I 3
s Pongo_pygmaeus.ctg62                                   19803899 2 +  19899266 TT
i Pongo_pygmaeus.ctg62                                  C 0 I 3
s Symphalangus_syndactylus.tarseq_24                     13898742 2 +  13920577 TT
i Symphalangus_syndactylus.tarseq_24                    C 0 I 3
e Sorex_araneus.JH798170.1                               17747650 0 -  27805282 C
e Dinomys_branickii.DinBra_scaffold_1996                   154649 0 +    228994 C
e Erinaceus_europaeus.JH835290.1                         11529683 0 +  16010500 C
e Chaetophractus_vellerosus.ChaVel_scaffold_1070855           279 0 -      1715 C
e Aplodontia_rufa.AprRuf_scaffold_156013                      909 0 +      5067 C
e Oryctolagus_cuniculus.CM000803.1                      141872640 3 + 163896628 I
e Ochotona_princeps.JH802095.1                            4992672 0 -  23139505 C
e Lepus_americanus.LepAme_scaffold_62849                     9991 3 +     22452 I
e Perognathus_longimembris.PerPac_flattened_line_22291      39945 1 -     45160 I
e Dipodomys_stephensi.DipSte_scaffold_44365                 23951 5 +     28912 I
e Dipodomys_ordii.KN672545.1                              3652397 5 +   4240102 I
e Suricata_suricatta.SurSur_flattened_line_20339            24377 0 +     62062 C
e Chrysochloris_asiatica.ChrAsi_scaffold_141308              5992 0 -     12508 C
e Ziphius_cavirostris.ZipCav_flattened_line_127025           4281 0 -      8775 C
e Zalophus_californianus.ZalCal_flattened_line_4097        211069 0 -    227762 C
e Vulpes_lagopus.VulLag_flattened_line_2045                134542 0 -    281493 C
e Vicugna_pacos.KN269600.1                                1522087 0 -   2331223 C
e Ursus_maritimus.KK498671.1                              6511394 0 +  28682327 C
e Uropsilus_gracilis.UroGra_scaffold_4143_0                 23954 0 -     25548 C
e Tursiops_truncatus.MRVK01000923.1                      69310778 0 -  96451834 C
e Trichechus_manatus.JH594618.1                          16078740 1 +  31416278 I
e Tragulus_javanicus.TraJav_scaffold_14717                   2634 0 +     90398 C
e Tonatia_saurophila.TonSau_scaffold_3334                  133289 0 -    259118 C
e Tolypeutes_matacus.TolMat_scaffold_269431                   999 0 +      6782 C
e Tapirus_terrestris.TapTer_scaffold_14939                  54814 0 +     99546 C
e Tapirus_indicus.TapInd_scaffold_176                      804154 0 +   1148477 C
e Tamandua_tetradactyla.TamTet_scaffold_26877               12147 0 +     45698 C
e Tadarida_brasiliensis.TadBra_scaffold_145589               3223 0 -      6213 C
e Sus_scrofa.CM000824.4                                 189269282 0 + 218635234 C
e Spilogale_gracilis.SpiGra_flattened_line_905             231807 0 -    276980 C
e Solenodon_paradoxus.SolPar_flattened_line_1012            15271 0 +    739146 C
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   28759 0 -    114521 C
e Saiga_tatarica.SaiTat_scaffold_82192                       5001 0 +     12214 C
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                16705 0 +    109198 C
e Rhinolophus_sinicus.LVEH01000179.1                      1784998 0 +   2252614 C
e Rangifer_tarandus.RanTarSib_scaffold_24239                13219 0 +     68503 C
e Puma_concolor.QAVW01000427.1                          131531126 0 - 161321710 C
e Pteropus_vampyrus.KN525959.1                             601356 0 -   3946241 C
e Pteropus_alecto.KB031157.1                             13243403 0 -  17261082 C
e Pteronura_brasiliensis.PteBra_flattened_line_1343        242810 0 -    344369 C
e Pteronotus_parnellii.KE867983.1                            1283 0 -     27784 C
e Procavia_capensis.ProCapCap_scaffold_15315                73365 0 +     78963 C
e Platanista_gangetica.PlaMin_flattened_line_72990           2744 0 +     21690 C
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            93631 8 +    112873 I
e Phocoena_phocoena.PhoPho_flattened_line_11948            118677 0 -    122454 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    112496 0 -    135482 C
e Pantholops_hodgsonii.KE114631.1                         1063571 0 -   1292953 C
e Panthera_tigris.KE721879.1                              5024314 0 -   6340057 C
e Panthera_pardus.KV860323.1                              3634536 0 +  18214204 C
e Panthera_onca.PanOnc_flattened_line_1615                  30933 0 +    295523 C
e Ovis_canadensis.OviCan_scaffold_6251                      75927 0 +    140051 C
e Ovis_aries.CM001582.2                                 134074713 0 - 275406953 C
e Otocyon_megalotis.JAEUCK010005121.1                      304472 0 -    505867 C
e Orycteropus_afer.OryAfe_flattened_line_13509              40522 0 -     66828 C
e Orcinus_orca.KB316965.1                                 7222060 0 -   7562323 C
e Okapia_johnstoni.LVCL01S0017931.1                         34297 0 +     78940 C
e Odocoileus_virginianus.KZ101650.1                       1077133 0 +   1425656 C
e Odobenus_rosmarus.KB229369.1                             676344 0 -   3126709 C
e Nyctereutes_procyonoides.CAJHUB010000786.1                27136 0 +   3668941 C
e Noctilio_leporinus.NocLep_scaffold_12062                  46733 0 +     94413 C
e Neophocaena_asiaeorientalis.KZ688543.1                  3948376 0 -   4490290 C
e Neomonachus_schauinslandi.NINY01007774.1                4481686 0 -  14209539 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             2473 0 -      8794 C
e Myotis_myotis.MyoMyo_scaffold_6123                         7641 0 +     66751 C
e Myotis_lucifugus.GL429887.1                             3462452 0 -   3747815 C
e Myotis_davidii.KB114863.1                               5016535 6 +   6462685 I
e Myotis_brandtii.KE161952.1                               964866 0 +   8389877 C
e Mustela_putorius.JH417978.1                             4420930 0 -  28371801 C
e Murina_feae.MurFea_scaffold_2254                          16540 0 -    100666 C
e Mungos_mungo.MunMun_flattened_line_8729                  141708 0 -    168139 C
e Moschus_moschiferus.MosMos_scaffold_146101                 2010 0 -      4346 C
e Mormoops_blainvillei.MorMeg_scaffold_2952                158616 0 +    265003 C
e Monodon_monoceros.MonMon_M_scaffold_5598                 143767 0 +    154973 C
e Mirounga_angustirostris.MirAng_flattened_line_8852         8085 0 -    104932 C
e Miniopterus_schreibersii.MinSch_scaffold_24116            31487 0 +     45743 C
e Miniopterus_natalensis.LDJU01000022.1                   8206806 0 +  10048721 C
e Micronycteris_hirsuta.MicHir_scaffold_37978               20079 0 -     32043 C
e Microgale_talazaci.MicTal_scaffold_34660                  28445 0 -     48017 C
e Mesoplodon_bidens.MesBid_scaffold_183284                   1040 0 +      2166 C
e Mellivora_capensis.MelCap_flattened_line_1828            226043 0 -    226874 C
e Megaderma_lyra.MegLyr_scaffold_3562                       61675 0 -    234502 C
e Manis_pentadactyla.KN017078.1                             33468 0 +     58827 C
e Manis_javanica.JSZB01003966.1                            143401 0 +    252755 C
e Lycaon_pictus.CM007556.1                               11084141 0 +  39895028 C
e Loxodonta_africana.GL010040.1                          20588262 0 -  62548349 C
e Lipotes_vexillifer.KE558548.1                            133344 0 +   3060487 C
e Leptonychotes_weddellii.KB714749.1                      3082787 0 -   3498232 C
e Lasiurus_borealis.LasBor_scaffold_5102                   111019 7 -    115756 I
e Kogia_breviceps.KogBre_flattened_line_35920               21002 0 +     37189 C
e Inia_geoffrensis.IniGeo_flattened_line_66725               6168 0 +     17520 C
e Hyaena_hyaena.HyaHya_flattened_line_20729                 13080 6 -     67322 I
e Hipposideros_galeritus.HipGal_scaffold_104691              5067 0 -      9143 C
e Hipposideros_armiger.JXIK01001085.1                      275911 0 -    477199 C
e Hippopotamus_amphibius.HipAmp_scaffold_1308              144491 0 +    277961 C
e Heterohyrax_brucei.HetBruBak_scaffold_25354               53501 0 +     73687 C
e Hemitragus_hylocrius.HemHyl_scaffold_16669                24911 0 -     91191 C
e Helogale_parvula.HelPar_flattened_line_22962              14020 0 +     53719 C
e Giraffa_tippelskirchi.LVKQ01S012154.1                    178425 0 -    189561 C
e Felis_nigripes.FelNig_flattened_line_8080                 17975 0 +     52776 C
e Felis_catus_fca126.CM031420.1                         129276840 0 - 158578461 C
e Eubalaena_japonica.EubJap_flattened_line_7756             58809 0 +     89355 C
e Eschrichtius_robustus.EscRob_flattened_line_685          312380 0 +    330699 C
e Equus_przewalskii.ATBW01073585.1                          10086 0 +     92910 C
e Equus_caballus.CM000402.2                              13348596 0 +  41866177 C
e Equus_asinus.JREZ01000062.1                             5850093 0 -   7175178 C
e Enhydra_lutris.KZ291749.1                              85868545 0 +  99434291 C
e Elephantulus_edwardii.JH947210.1                        7803681 0 +  15467074 C
e Elaphurus_davidianus.JRFZ01086400.1                     1488900 0 +   1727528 C
e Eidolon_helvum.KE772537.1                                  9606 0 +     24177 C
e Echinops_telfairi.JH980316.1                           22991497 0 -  44670279 C
e Diceros_bicornis.DicBicMic_scaffold_170113                  624 0 +       818 C
e Dicerorhinus_sumatrensis.PEKH010003161.1                 319366 0 +    993696 C
e Desmodus_rotundus.KZ672188.1                           18696231 0 -  18957592 C
e Delphinapterus_leucas.KZ290064.1                       80034242 0 -  96802777 C
e Dasypus_novemcinctus.JH568778.1                          179083 6 -   6883506 I
e Cryptoprocta_ferox.CryFer_flattened_line_19014            48813 0 -     70449 C
e Crocidura_indochinensis.CroInd_scaffold_38409             16131 0 -     19186 C
e Craseonycteris_thonglongyai.CraTho_scaffold_22679         36617 0 -     40477 C
e Condylura_cristata.JH655880.1                          60610165 0 +  78930452 C
e Choloepus_hoffmanni.KN194586.1                           759207 0 +    964067 C
e Choloepus_didactylus.ChoDid_scaffold_36182                13901 0 -     21363 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_160623          459 0 -      9338 C
e Catagonus_wagneri.CatWag_scaffold_1305                   156215 0 -    276539 C
e Carollia_perspicillata.CarPer_scaffold_4436               56918 0 +     67245 C
e Capra_hircus.CM004562.1                               135703876 0 - 157403528 C
e Capra_aegagrus.CM003214.1                              21322649 0 + 157394656 C
e Canis_lupus_orion.HG994411.1                           16451719 0 -  44759192 C
e Canis_lupus_familiaris.chr31                           11084685 0 +  39895921 C
e Canis_lupus_dingo.QKWQ01001993.1                       11262156 0 -  35597290 C
e Canis_lupus_VD.CanFam_VD_scaffold_16982                   10514 0 +     87036 C
e CanFam4.chr31                                          11515497 0 +  39901454 C
e Camelus_ferus.KB016973.1                                2970444 0 +   6889770 C
e Camelus_dromedarius.KN271192.1                           394707 0 -  15254737 C
e Camelus_bactrianus.KN276303.1                           3217006 0 -   8989139 C
e Bubalus_bubalis.KI419065.1                              1228374 0 -   1914593 C
e Bos_taurus.CM000177.6                                 136292754 0 - 158972876 C
e Bos_mutus.JH883513.1                                     569398 0 -    998990 C
e Bos_indicus.CM003021.1                                138137021 0 - 161108492 C
e Bison_bison.KN264915.1                                  6556786 0 +   6870073 C
e Beatragus_hunteri.BeaHun_scaffold_21644                   40642 0 -     72089 C
e Balaenoptera_bonaerensis.DF502048.1                        2727 0 -     13118 C
e Balaenoptera_acutorostrata.KI537095.1                  26377496 0 +  51448160 C
e Artibeus_jamaicensis.ArtJam_scaffold_41619                 5879 0 -     29036 C
e Antilocapra_americana.AntAmePen_scaffold_42841            28175 0 +     33004 C
e Anoura_caudifer.AnoCau_scaffold_422                      387737 0 -    631301 C
e Ammotragus_lervia.NIVO01013474.1                        3517542 0 +   4113121 C
e Ailurus_fulgens.LNAC01000003.1                          7090823 0 -  16596857 C
e Ailuropoda_melanoleuca.LNAT01000321.1                  10654120 0 +  23371972 C
e Acinonyx_jubatus.LLWD01000356.1                         2030786 0 +   3721120 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16291 1 -    119109 I
e Glis_glis.GliGli_scaffold_79770                            9625 1 -     18683 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     12283 2 -     20485 I
e Jaculus_jaculus.JH725517.1                              8561873 2 +  11848649 I
e Allactaga_bullata.AllBul_scaffold_70162                    8911 2 -     22067 I
e Galeopterus_variegatus.GalVar_scaffold_354               153220 0 +    324696 C
e Microtus_ochrogaster.CM001673.1                        22816305 0 -  98408828 C
e Xerus_inauris.XerIna_scaffold_7898                       124051 0 -    134049 C
e Varecia_variegata.k141_775891                             21766 0 -     33872 C
e Varecia_rubra.k141_432109                                  2220 0 -     20643 C
e Tupaia_tana.TupTan_flattened_line_68454                    1127 0 +     13056 C
e Tupaia_chinensis.KB320831.1                             2788589 0 -   3938065 C
e Trachypithecus_pileatus.k141_469329                        1460 0 +      3372 C
e Trachypithecus_phayrei.ctg3                            44656450 0 -  44834318 C
e Trachypithecus_obscurus.k141_1115109                       1655 0 -     28054 C
e Trachypithecus_melamera.k141_238507                       11177 0 +     14732 C
e Trachypithecus_leucocephalus.k141_283605                  48002 0 +     51589 C
e Trachypithecus_laotum.k141_171445                          1640 0 +      3528 C
e Trachypithecus_hatinhensis.k141_357672                    22974 0 -     25040 C
e Trachypithecus_germaini.k141_809503                       15611 0 +     17312 C
e Trachypithecus_geei.k141_670367                           39612 0 -     54611 C
e Trachypithecus_francoisi.k141_1178450                      1666 0 -      3559 C
e Trachypithecus_cristatus.k141_27198                       22788 0 +     24652 C
e Trachypithecus_crepusculus.k141_1588528                   16890 0 -     32910 C
e Trachypithecus_auratus.k141_738098                        23163 0 +     38948 C
e Theropithecus_gelada.CM009951.1                       194004089 0 - 194193292 C
e Tarsius_wallacei.k141_48636                               56794 5 +     65473 I
e Tarsius_lariang.k141_609102                               23480 5 +     42269 I
e Spermophilus_dauricus.KZ294190.1                        2236948 0 +   2842873 C
e Sigmodon_hispidus.SigHis_scaffold_11332                   96366 0 -    120886 C
e Semnopithecus_vetulus.k141_642050                         31786 0 -     33692 C
e Semnopithecus_schistaceus.k141_653647                     22765 2 -     27512 I
e Semnopithecus_priam.k141_198153                            9345 0 -     12194 C
e Semnopithecus_johnii.k141_1351450                         38787 0 +     40653 C
e Semnopithecus_hypoleucos.k141_761524                       5053 0 +     20762 C
e Semnopithecus_entellus.k141_1527475                       24592 0 +     26421 C
e Sapajus_macrocephalus.k141_966464                         17491 0 -     62485 C
e Sapajus_apella.ctg10                                   17337891 0 -  30362882 C
e Saimiri_ustus.k141_1282476                                 1368 0 -     76454 C
e Saimiri_sciureus.k141_1947592                              1431 0 +     60816 C
e Saimiri_oerstedii.k141_841116                              1435 0 +     67014 C
e Saimiri_macrodon.k141_2087127                              1358 0 -     60842 C
e Saimiri_cassiquiarensis.k141_808270                        1415 0 +     34089 C
e Saimiri_boliviensis.NW_024100938.1                     15669549 0 -  43202129 C
e Rhinopithecus_strykeri.ctg4                            44851579 0 -  45163003 C
e Rhinopithecus_roxellana.NC_044549.1                   206373931 0 - 206558726 C
e Rhinopithecus_bieti.k119_102124                           12605 0 -     14454 C
e Rattus_norvegicus.chr11                                13912185 0 +  90463843 C
e Pygathrix_nigripes_a.k141_101123                             2049 0 +     18040 C
e Pygathrix_nigripes_b.ctg79                                 6802657 0 +   6970761 C
e Pygathrix_cinerea.k141_374971                             26168 0 +     56732 C
e Psammomys_obesus.NESX01026517.1                           30142 0 +     77221 C
e Propithecus_verreauxi.k141_158021                         36081 0 -     48185 C
e Propithecus_tattersalli.k141_907138                       13809 0 -     53241 C
e Propithecus_perrieri.k141_7554                            14167 0 +     27322 C
e Propithecus_edwardsi.k141_1317105                         32245 0 -     44753 C
e Propithecus_diadema.k141_577245                           39857 0 +     52369 C
e Propithecus_coronatus.k141_1353159                          526 0 +     11805 C
e Propithecus_coquerelli.NW_012147863.1                     13843 0 -     30946 C
e Prolemur_simus.MPIZ01000048.1                           6845375 0 +  12164890 C
e Presbytis_mitrata.k141_860013                              2177 0 +     14865 C
e Presbytis_comata.k141_672698                               2043 0 -     15069 C
e Plecturocebus_moloch.k141_890597                          20091 0 -     75465 C
e Plecturocebus_miltoni.k141_841561                          9501 0 +    134592 C
e Plecturocebus_hoffmannsi.k141_1595076                      6541 0 +      8943 C
e Plecturocebus_grovesi.k141_242819                         19781 0 +    152463 C
e Plecturocebus_dubius.k141_3565563                           428 0 -     55515 C
e Plecturocebus_cupreus.k141_1223294                        19962 0 -     23762 C
e Plecturocebus_cinerascens.k141_744510                     19712 0 +    147771 C
e Plecturocebus_caligatus.k141_2539816                      10111 0 -     98129 C
e Plecturocebus_brunneus.k141_498086                        19866 0 +     67491 C
e Plecturocebus_bernhardi.k141_959214                       19656 0 +     44506 C
e Pithecia_vanzolinii.k141_831006                           10249 0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13471341 0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          2347 0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                         9038 0 -     16101 C
e Pithecia_hirsuta.k141_1152968                              5840 0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        21889 0 +     78826 C
e Pithecia_albicans.k141_991845                             40460 0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000036.1               26736473 0 +  26888534 C
e Piliocolobus_kirkii.k141_557609                           18464 0 +     19957 C
e Piliocolobus_gordonorum.k141_902470                       21712 0 -     82327 C
e Piliocolobus_badius.k141_1497351                           1806 0 -      3310 C
e Peromyscus_maniculatus.KI615518.1                       4946752 0 -   8017169 C
e Perodicticus_potto.k141_713187                            21344 0 -     27972 C
e Perodicticus_ibeanus.k141_117958                           2047 0 -     23713 C
e Papio_ursinus.k141_3762866                                34121 0 +     35859 C
e Papio_papio.k141_3561084                                  13718 0 -     29451 C
e Papio_kindae.k141_5458022                                 63932 0 -    104429 C
e Papio_hamadryas.Contig15                               47509950 0 +  47705337 C
e Papio_cynocephalus.k141_386926                            48765 0 +     76494 C
e Papio_anubis.CM001492.2                               188152553 0 - 188283584 C
e Otolemur_garnettii.GL873528.1                          18005432 1 -  38779656 I
e Otolemur_crassicaudatus.k141_321880                       35991 1 +     38679 I
e Onychomys_torridus.OnyTor_scaffold_12578                  33578 0 +     62360 C
e Ondatra_zibethicus.OndZib_scaffold_6821                  121638 0 +    145789 C
e Octodon_degus.JH651621.1                                3678743 1836 +  10294119 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65666353 0 +  89412551 C
e Nycticebus_coucang.k141_2051882                             829 0 +      6470 C
e Nycticebus_bengalensis.LG16                            65563984 0 -  95554990 C
e Nasalis_larvatus.k141_153429                               4805 0 +     48152 C
e Nannospalax_galili.KL204535.1                           2056859 0 +   2354432 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     87101 0 -    117718 C
e Muscardinus_avellanarius.MusAve_scaffold_9643              8136 1 +     98495 I
e Mus_spretus.CM004110.1                                 74327278 6 +  97876770 I
e Mus_pahari.LT608305.1                                  67552266 6 +  89017189 I
e Mus_musculus.chr16                                     75486102 6 +  98207768 I
e Mus_caroli.LT608236.1                                  70763028 6 +  92629107 I
e Mirza_zaza.k141_226143                                     2531 0 +      8497 C
e Miopithecus_ogouensis.k141_2666161                        32424 0 +     34273 C
e Microcebus_murinus.CM007691.1                          16507118 0 +  47401472 C
e Mesocricetus_auratus.KB708139.1                         1043418 6 -  26018355 I
e Meriones_unguiculatus.MerUng_scaffold_52233                8613 0 +     15977 C
e Marmota_marmota.CZRN01000005.1                         36870872 0 +  64221397 C
e Mandrillus_sphinx.Contig144                             4446595 0 -   4543643 C
e Mandrillus_leucophaeus.scaffold125                     43433769 0 -  43563597 C
e Macaca_tonkeana.k141_2870633                               1908 0 -     27140 C
e Macaca_thibetana.k99_116940                                4326 0 -      5978 C
e Macaca_silenus.Contig12                                43837103 0 +  43892939 C
e Macaca_siberu.k141_741907                                 12066 0 -     55006 C
e Macaca_radiata.k141_1580474                                1733 0 -      3617 C
e Macaca_nigra.k141_282495                                   1903 0 -     46448 C
e Macaca_nemestrina.KQ004885.1                           11441980 0 +  11645122 C
e Macaca_mulatta.NC_041755.1                            196031874 0 + 196197964 C
e Macaca_maura.k141_251854                                  42956 0 -     79256 C
e Macaca_leonina.k141_3421209                                1344 0 +      3017 C
e Macaca_fuscata.k119_1068107                               11771 0 +     12679 C
e Macaca_fascicularis.k141_155037                           43195 0 +     63263 C
e Macaca_cyclopis.k119_1168412                               4894 0 +      6569 C
e Macaca_assamensis.Contig65                             12702798 0 +  12821369 C
e Macaca_arctoides.k141_2201161                             16292 0 +     74745 C
e Loris_tardigradus.ctg97                                 3775405 0 +   6799190 C
e Loris_lydekkerianus.k141_550999                            7654 0 +     84689 C
e Lophocebus_aterrimus.ctg55                             19244609 0 +  19376315 C
e Lepilemur_septentrionalis.k141_578524                     28536 0 -     33031 C
e Lepilemur_ruficaudatus.k141_617879                        75495 0 +    116806 C
e Lepilemur_dorsalis.k141_134267                            50273 0 +     63517 C
e Lepilemur_ankaranensis.k141_884009                        20899 0 +     39228 C
e Lemur_catta.scaffold_1                                258404001 0 - 285822530 C
e Lagothrix_lagothricha.k141_12968                          46966 0 -    147782 C
e Ictidomys_tridecemlineatus.JH393315.1                   7123028 0 +  13083262 C
e Hystrix_cristata.HysCri_scaffold_50788                     3134 0 +     22540 C
e Heterocephalus_glaber.JH602058.1                        2548028 229 +  31725842 I
e Hapalemur_occidentalis.k141_797938                        42319 0 -     54384 C
e Hapalemur_meridionalis.k141_186231                        25722 0 -     42470 C
e Hapalemur_griseus.k141_1387522                             2449 0 +     56096 C
e Hapalemur_gilberti.k141_97962                             24995 0 +     26611 C
e Hapalemur_alaotrensis.k141_1198205                         2515 0 +      3980 C
e Graphiurus_murinus.GraMur_scaffold_4493                   74176 1 +    118900 I
e Galagoides_demidoff.k141_1769638                           7353 0 +     27357 C
e Galago_senegalensis.k141_964197                           10303 0 -     43889 C
e Galago_moholi.ctg555                                     207923 0 -    847004 C
e Fukomys_damarensis.KN123630.1                          13889876 0 -  19261668 C
e Eulemur_sanfordi.k141_186399                              12739 1 -     29447 I
e Eulemur_rufus.k141_1620292                                30016 1 +     46535 I
e Eulemur_rubriventer.k141_411740                           15288 1 +     26808 I
e Eulemur_mongoz.k141_825972                                12827 1 +     27497 I
e Eulemur_macaco.k141_1341545                               12550 1 +     16540 I
e Eulemur_fulvus.k141_653297                                 8176 1 +    109717 I
e Eulemur_flavifrons.k141_903901                             4688 1 +     60246 I
e Eulemur_coronatus.k141_3240342                             8372 1 +     36558 I
e Eulemur_collaris.k141_311830                               1900 0 -      6809 C
e Eulemur_albifrons.k141_715837                              1964 1 +     13586 I
e Erythrocebus_patas.Contig8                             48767522 0 -  48907691 C
e Ellobius_talpinus.LOJH01090055.1                           3164 0 -      7838 C
e Ellobius_lutescens.LOEQ01003611.1                        236156 0 -    369425 C
e Dolichotis_patagonum.DolPat_scaffold_14102                33375 0 -     73477 C
e Daubentonia_madagascariensis.ctg11                     16841773 0 +  31942871 C
e Dasyprocta_punctata.DasPun_flattened_line_634             56104 16 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                14631 16 +     26546 I
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 27476 0 -     67205 C
e Ctenodactylus_gundi.CteGun_scaffold_447                  205257 0 -    956709 C
e Cricetulus_griseus.LT883672.1                          53025688 0 +  72327488 C
e Cricetomys_gambianus.CriGam_scaffold_949                 274501 0 -    399297 C
e Colobus_polykomos.k141_1406057                            12561 0 +     23629 C
e Colobus_guereza.LG08                                  147660575 0 + 156195979 C
e Colobus_angolensis.KN985967.1                          10879417 0 +  10971483 C
e Chlorocebus_sabaeus.CM001963.2                        101140838 0 + 101219884 C
e Chlorocebus_pygerythrus.k141_1486215                      30389 0 -     53260 C
e Chlorocebus_aethiops.ctg22                             15135343 0 -  15256731 C
e Chiropotes_sagulatus.k141_773804                          12149 0 +     40510 C
e Chiropotes_israelita.k141_1189915                         67968 0 +    196370 C
e Chinchilla_lanigera.JH721867.1                         15958784 0 +  43084221 C
e Cheracebus_torquatus.k141_315545                          43127 0 +     54541 C
e Cheracebus_regulus.k141_2128895                           38452 0 +     57117 C
e Cheracebus_lugens.k141_203936                             19413 0 +     25473 C
e Cheracebus_lucifer.k141_619653                             2390 0 -     18223 C
e Cheirogaleus_medius.k141_133808                            4946 3 +     13308 I
e Cheirogaleus_major.k141_1157592                           55904 0 -     68416 C
e Cercopithecus_roloway.k141_3372345                         2062 0 -      4205 C
e Cercopithecus_pogonias.k141_1977419                        2537 0 -      4411 C
e Cercopithecus_petaurista.k141_2037881                      2737 0 -      4669 C
e Cercopithecus_nictitans.k141_675209                        1746 0 -      3443 C
e Cercopithecus_neglectus.k141_1474992                      31710 0 +     33420 C
e Cercopithecus_mona.ctg12                               46473883 0 +  46592721 C
e Cercopithecus_albogularis.ctg51                              11987130 0 +  12117833 C
e Cercopithecus_lowei.k141_623764                           20608 0 +     35983 C
e Cercopithecus_hamlyni.k141_381099                          1804 0 -      3505 C
e Cercopithecus_diana.k141_1490386                           1911 0 -      4022 C
e Cercopithecus_cephus.k141_598190                          25887 0 +     30494 C
e Cercopithecus_ascanius.k141_3371259                        1954 0 -      3853 C
e Cercocebus_torquatus.k141_3969582                         55513 0 -    107033 C
e Cercocebus_lunulatus.k141_3387186                         17982 0 -     19697 C
e Cercocebus_chrysogaster.k141_2951608                      52998 0 -     54931 C
e Cercocebus_atys.KQ010443.1                              6551521 0 +   6739814 C
e Cephalopachus_bancanus.k141_702587                         5043 0 +     21754 C
e Cebus_unicolor.k141_239009                                 9374 0 +     25043 C
e Cebus_olivaceus.k141_93739                                 5131 0 -     26817 C
e Cebus_albifrons.Contig22                               18887587 0 -  29618158 C
e Cavia_tschudii.CavTsc_scaffold_488                       173989 0 +    436027 C
e Cavia_porcellus.DS562889.1                             15795798 0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15783848 16 -  24422027 I
e Castor_canadensis.CasCan_scaffold_47037                   27416 1 +     33760 I
e Carlito_syrichta.NW_007248099.1                          306002 0 +    345090 C
e Capromys_pilorides.CapPil_scaffold_647363                  1402 3 +      1887 I
e Cacajao_melanocephalus.k141_1160263                        4361 0 -    134917 C
e Cacajao_hosomi.k141_303789                                11821 0 -    216513 C
e Cacajao_calvus.k141_96166                                  9773 0 +    125063 C
e Cacajao_ayresi.k141_724503                               110747 0 -    171031 C
e Avahi_peyrierasi.k141_767228                               9546 0 -      9688 C
e Avahi_laniger.k141_2840928                                 3597 0 -     16375 C
e Ateles_paniscus.k141_1631200                               2843 0 -     25888 C
e Ateles_marginatus.k141_899112                             60892 0 +    119057 C
e Ateles_geoffroyi_a.k141_1300742                             12906 0 -     58268 C
e Ateles_chamek.k141_1072810                                 8396 0 +     89302 C
e Ateles_belzebuth.k141_1348307                             57397 0 +     85812 C
e Ateles_geoffroyi_b.tarseq_2582                             9536113 0 +  39197703 C
e Arctocebus_calabarensis.k141_1161114                      14850 0 +     17483 C
e Aotus_vociferans.k141_718647                               2850 0 +     23246 C
e Aotus_trivirgatus.k141_1740727                             2841 0 -    104377 C
e Aotus_nancymaae.KZ196176.1                              5746260 0 +   9889416 C
e Aotus_griseimembra.k141_3275623                            2302 0 +     22701 C
e Aotus_azarae.k141_3170768                                 59372 0 +     78111 C
e Alouatta_seniculus.k141_990213                             3658 0 +      6429 C
e Alouatta_puruensis.k141_1284840                             725 0 -      4927 C
e Alouatta_palliata.k141_1316127                             6927 0 +     10410 C
e Alouatta_nigerrima.k141_2718643                            3640 0 +      7047 C
e Alouatta_macconnelli.k141_1331706                          6985 0 -     10438 C
e Alouatta_juara.k141_1856473                                6071 0 +      7227 C
e Alouatta_discolor.k141_811576                              7689 0 -     21359 C
e Alouatta_caraya.k141_5460                                  8128 0 -     11521 C
e Alouatta_belzebul.k141_1818029                             7012 0 -     18050 C
e Allochrocebus_solatus.k141_787528                          1833 0 +      3797 C
e Allochrocebus_preussi.k141_1202907                         2257 0 +     72529 C
e Allochrocebus_lhoesti.k141_4825038                        51533 0 +     53391 C
e Allenopithecus_nigroviridis.k141_3103707                  59725 0 +     61638 C
e Acomys_cahirinus.AcoCah_scaffold_1625                    109064 0 -    189883 C

a score=0.000000
s hg38.chr4_GL000008v2_random                                8708 2 +    209709 CT
s Gorilla_beringei.k141_111300                               2104 2 -     14630 TT
i Gorilla_beringei.k141_111300                          I 1 I 2
s Gorilla_gorilla.LT578340.1                            119649202 2 - 195582420 tt
i Gorilla_gorilla.LT578340.1                            I 1 I 3
s Pan_paniscus.CM003386.1                               127571444 2 - 205426864 ct
i Pan_paniscus.CM003386.1                               I 1 I 3
s Pan_troglodytes.CM009241.2                            120148591 2 - 196562556 ct
i Pan_troglodytes.CM009241.2                            I 1 I 3
e Sorex_araneus.JH798170.1                               17747650 0 -  27805282 C
e Dinomys_branickii.DinBra_scaffold_1996                   154649 0 +    228994 C
e Erinaceus_europaeus.JH835290.1                         11529683 0 +  16010500 C
e Chaetophractus_vellerosus.ChaVel_scaffold_1070855           279 0 -      1715 C
e Aplodontia_rufa.AprRuf_scaffold_156013                      909 0 +      5067 C
e Oryctolagus_cuniculus.CM000803.1                      141872640 3 + 163896628 I
e Ochotona_princeps.JH802095.1                            4992672 0 -  23139505 C
e Lepus_americanus.LepAme_scaffold_62849                     9991 3 +     22452 I
e Perognathus_longimembris.PerPac_flattened_line_22291      39945 1 -     45160 I
e Dipodomys_stephensi.DipSte_scaffold_44365                 23951 5 +     28912 I
e Dipodomys_ordii.KN672545.1                              3652397 5 +   4240102 I
e Suricata_suricatta.SurSur_flattened_line_20339            24377 0 +     62062 C
e Nomascus_siki_a.k141_844529                                   959 3 +      2124 I
e Chrysochloris_asiatica.ChrAsi_scaffold_141308              5992 0 -     12508 C
e Ziphius_cavirostris.ZipCav_flattened_line_127025           4281 0 -      8775 C
e Zalophus_californianus.ZalCal_flattened_line_4097        211069 0 -    227762 C
e Vulpes_lagopus.VulLag_flattened_line_2045                134542 0 -    281493 C
e Vicugna_pacos.KN269600.1                                1522087 0 -   2331223 C
e Ursus_maritimus.KK498671.1                              6511394 0 +  28682327 C
e Uropsilus_gracilis.UroGra_scaffold_4143_0                 23954 0 -     25548 C
e Tursiops_truncatus.MRVK01000923.1                      69310778 0 -  96451834 C
e Trichechus_manatus.JH594618.1                          16078740 1 +  31416278 I
e Tragulus_javanicus.TraJav_scaffold_14717                   2634 0 +     90398 C
e Tonatia_saurophila.TonSau_scaffold_3334                  133289 0 -    259118 C
e Tolypeutes_matacus.TolMat_scaffold_269431                   999 0 +      6782 C
e Tapirus_terrestris.TapTer_scaffold_14939                  54814 0 +     99546 C
e Tapirus_indicus.TapInd_scaffold_176                      804154 0 +   1148477 C
e Tamandua_tetradactyla.TamTet_scaffold_26877               12147 0 +     45698 C
e Tadarida_brasiliensis.TadBra_scaffold_145589               3223 0 -      6213 C
e Sus_scrofa.CM000824.4                                 189269282 0 + 218635234 C
e Spilogale_gracilis.SpiGra_flattened_line_905             231807 0 -    276980 C
e Solenodon_paradoxus.SolPar_flattened_line_1012            15271 0 +    739146 C
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   28759 0 -    114521 C
e Saiga_tatarica.SaiTat_scaffold_82192                       5001 0 +     12214 C
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                16705 0 +    109198 C
e Rhinolophus_sinicus.LVEH01000179.1                      1784998 0 +   2252614 C
e Rangifer_tarandus.RanTarSib_scaffold_24239                13219 0 +     68503 C
e Puma_concolor.QAVW01000427.1                          131531126 0 - 161321710 C
e Pteropus_vampyrus.KN525959.1                             601356 0 -   3946241 C
e Pteropus_alecto.KB031157.1                             13243403 0 -  17261082 C
e Pteronura_brasiliensis.PteBra_flattened_line_1343        242810 0 -    344369 C
e Pteronotus_parnellii.KE867983.1                            1283 0 -     27784 C
e Procavia_capensis.ProCapCap_scaffold_15315                73365 0 +     78963 C
e Platanista_gangetica.PlaMin_flattened_line_72990           2744 0 +     21690 C
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            93631 8 +    112873 I
e Phocoena_phocoena.PhoPho_flattened_line_11948            118677 0 -    122454 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    112496 0 -    135482 C
e Pantholops_hodgsonii.KE114631.1                         1063571 0 -   1292953 C
e Panthera_tigris.KE721879.1                              5024314 0 -   6340057 C
e Panthera_pardus.KV860323.1                              3634536 0 +  18214204 C
e Panthera_onca.PanOnc_flattened_line_1615                  30933 0 +    295523 C
e Ovis_canadensis.OviCan_scaffold_6251                      75927 0 +    140051 C
e Ovis_aries.CM001582.2                                 134074713 0 - 275406953 C
e Otocyon_megalotis.JAEUCK010005121.1                      304472 0 -    505867 C
e Orycteropus_afer.OryAfe_flattened_line_13509              40522 0 -     66828 C
e Orcinus_orca.KB316965.1                                 7222060 0 -   7562323 C
e Okapia_johnstoni.LVCL01S0017931.1                         34297 0 +     78940 C
e Odocoileus_virginianus.KZ101650.1                       1077133 0 +   1425656 C
e Odobenus_rosmarus.KB229369.1                             676344 0 -   3126709 C
e Nyctereutes_procyonoides.CAJHUB010000786.1                27136 0 +   3668941 C
e Noctilio_leporinus.NocLep_scaffold_12062                  46733 0 +     94413 C
e Neophocaena_asiaeorientalis.KZ688543.1                  3948376 0 -   4490290 C
e Neomonachus_schauinslandi.NINY01007774.1                4481686 0 -  14209539 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             2473 0 -      8794 C
e Myotis_myotis.MyoMyo_scaffold_6123                         7641 0 +     66751 C
e Myotis_lucifugus.GL429887.1                             3462452 0 -   3747815 C
e Myotis_davidii.KB114863.1                               5016535 6 +   6462685 I
e Myotis_brandtii.KE161952.1                               964866 0 +   8389877 C
e Mustela_putorius.JH417978.1                             4420930 0 -  28371801 C
e Murina_feae.MurFea_scaffold_2254                          16540 0 -    100666 C
e Mungos_mungo.MunMun_flattened_line_8729                  141708 0 -    168139 C
e Moschus_moschiferus.MosMos_scaffold_146101                 2010 0 -      4346 C
e Mormoops_blainvillei.MorMeg_scaffold_2952                158616 0 +    265003 C
e Monodon_monoceros.MonMon_M_scaffold_5598                 143767 0 +    154973 C
e Mirounga_angustirostris.MirAng_flattened_line_8852         8085 0 -    104932 C
e Miniopterus_schreibersii.MinSch_scaffold_24116            31487 0 +     45743 C
e Miniopterus_natalensis.LDJU01000022.1                   8206806 0 +  10048721 C
e Micronycteris_hirsuta.MicHir_scaffold_37978               20079 0 -     32043 C
e Microgale_talazaci.MicTal_scaffold_34660                  28445 0 -     48017 C
e Mesoplodon_bidens.MesBid_scaffold_183284                   1040 0 +      2166 C
e Mellivora_capensis.MelCap_flattened_line_1828            226043 0 -    226874 C
e Megaderma_lyra.MegLyr_scaffold_3562                       61675 0 -    234502 C
e Manis_pentadactyla.KN017078.1                             33468 0 +     58827 C
e Manis_javanica.JSZB01003966.1                            143401 0 +    252755 C
e Lycaon_pictus.CM007556.1                               11084141 0 +  39895028 C
e Loxodonta_africana.GL010040.1                          20588262 0 -  62548349 C
e Lipotes_vexillifer.KE558548.1                            133344 0 +   3060487 C
e Leptonychotes_weddellii.KB714749.1                      3082787 0 -   3498232 C
e Lasiurus_borealis.LasBor_scaffold_5102                   111019 7 -    115756 I
e Kogia_breviceps.KogBre_flattened_line_35920               21002 0 +     37189 C
e Inia_geoffrensis.IniGeo_flattened_line_66725               6168 0 +     17520 C
e Hyaena_hyaena.HyaHya_flattened_line_20729                 13080 6 -     67322 I
e Hipposideros_galeritus.HipGal_scaffold_104691              5067 0 -      9143 C
e Hipposideros_armiger.JXIK01001085.1                      275911 0 -    477199 C
e Hippopotamus_amphibius.HipAmp_scaffold_1308              144491 0 +    277961 C
e Heterohyrax_brucei.HetBruBak_scaffold_25354               53501 0 +     73687 C
e Hemitragus_hylocrius.HemHyl_scaffold_16669                24911 0 -     91191 C
e Helogale_parvula.HelPar_flattened_line_22962              14020 0 +     53719 C
e Giraffa_tippelskirchi.LVKQ01S012154.1                    178425 0 -    189561 C
e Felis_nigripes.FelNig_flattened_line_8080                 17975 0 +     52776 C
e Felis_catus_fca126.CM031420.1                         129276840 0 - 158578461 C
e Eubalaena_japonica.EubJap_flattened_line_7756             58809 0 +     89355 C
e Eschrichtius_robustus.EscRob_flattened_line_685          312380 0 +    330699 C
e Equus_przewalskii.ATBW01073585.1                          10086 0 +     92910 C
e Equus_caballus.CM000402.2                              13348596 0 +  41866177 C
e Equus_asinus.JREZ01000062.1                             5850093 0 -   7175178 C
e Enhydra_lutris.KZ291749.1                              85868545 0 +  99434291 C
e Elephantulus_edwardii.JH947210.1                        7803681 0 +  15467074 C
e Elaphurus_davidianus.JRFZ01086400.1                     1488900 0 +   1727528 C
e Eidolon_helvum.KE772537.1                                  9606 0 +     24177 C
e Echinops_telfairi.JH980316.1                           22991497 0 -  44670279 C
e Diceros_bicornis.DicBicMic_scaffold_170113                  624 0 +       818 C
e Dicerorhinus_sumatrensis.PEKH010003161.1                 319366 0 +    993696 C
e Desmodus_rotundus.KZ672188.1                           18696231 0 -  18957592 C
e Delphinapterus_leucas.KZ290064.1                       80034242 0 -  96802777 C
e Dasypus_novemcinctus.JH568778.1                          179083 6 -   6883506 I
e Cryptoprocta_ferox.CryFer_flattened_line_19014            48813 0 -     70449 C
e Crocidura_indochinensis.CroInd_scaffold_38409             16131 0 -     19186 C
e Craseonycteris_thonglongyai.CraTho_scaffold_22679         36617 0 -     40477 C
e Condylura_cristata.JH655880.1                          60610165 0 +  78930452 C
e Choloepus_hoffmanni.KN194586.1                           759207 0 +    964067 C
e Choloepus_didactylus.ChoDid_scaffold_36182                13901 0 -     21363 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_160623          459 0 -      9338 C
e Catagonus_wagneri.CatWag_scaffold_1305                   156215 0 -    276539 C
e Carollia_perspicillata.CarPer_scaffold_4436               56918 0 +     67245 C
e Capra_hircus.CM004562.1                               135703876 0 - 157403528 C
e Capra_aegagrus.CM003214.1                              21322649 0 + 157394656 C
e Canis_lupus_orion.HG994411.1                           16451719 0 -  44759192 C
e Canis_lupus_familiaris.chr31                           11084685 0 +  39895921 C
e Canis_lupus_dingo.QKWQ01001993.1                       11262156 0 -  35597290 C
e Canis_lupus_VD.CanFam_VD_scaffold_16982                   10514 0 +     87036 C
e CanFam4.chr31                                          11515497 0 +  39901454 C
e Camelus_ferus.KB016973.1                                2970444 0 +   6889770 C
e Camelus_dromedarius.KN271192.1                           394707 0 -  15254737 C
e Camelus_bactrianus.KN276303.1                           3217006 0 -   8989139 C
e Bubalus_bubalis.KI419065.1                              1228374 0 -   1914593 C
e Bos_taurus.CM000177.6                                 136292754 0 - 158972876 C
e Bos_mutus.JH883513.1                                     569398 0 -    998990 C
e Bos_indicus.CM003021.1                                138137021 0 - 161108492 C
e Bison_bison.KN264915.1                                  6556786 0 +   6870073 C
e Beatragus_hunteri.BeaHun_scaffold_21644                   40642 0 -     72089 C
e Balaenoptera_bonaerensis.DF502048.1                        2727 0 -     13118 C
e Balaenoptera_acutorostrata.KI537095.1                  26377496 0 +  51448160 C
e Artibeus_jamaicensis.ArtJam_scaffold_41619                 5879 0 -     29036 C
e Antilocapra_americana.AntAmePen_scaffold_42841            28175 0 +     33004 C
e Anoura_caudifer.AnoCau_scaffold_422                      387737 0 -    631301 C
e Ammotragus_lervia.NIVO01013474.1                        3517542 0 +   4113121 C
e Ailurus_fulgens.LNAC01000003.1                          7090823 0 -  16596857 C
e Ailuropoda_melanoleuca.LNAT01000321.1                  10654120 0 +  23371972 C
e Acinonyx_jubatus.LLWD01000356.1                         2030786 0 +   3721120 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16291 1 -    119109 I
e Glis_glis.GliGli_scaffold_79770                            9625 1 -     18683 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     12283 2 -     20485 I
e Jaculus_jaculus.JH725517.1                              8561873 2 +  11848649 I
e Hylobates_pileatus_a.tarseq_592                             29948 3 -     60944 I
e Allactaga_bullata.AllBul_scaffold_70162                    8911 2 -     22067 I
e Hylobates_muelleri.k141_1133650                            1345 3 -      2775 I
e Hylobates_klossii.k141_584463                               287 3 -      1009 I
e Hylobates_agilis.k141_282275                               1123 3 +      1846 I
e Hylobates_abbotti.k141_493872                              1910 3 +      5897 I
e Galeopterus_variegatus.GalVar_scaffold_354               153220 0 +    324696 C
e Microtus_ochrogaster.CM001673.1                        22816305 0 -  98408828 C
e Xerus_inauris.XerIna_scaffold_7898                       124051 0 -    134049 C
e Varecia_variegata.k141_775891                             21766 0 -     33872 C
e Varecia_rubra.k141_432109                                  2220 0 -     20643 C
e Tupaia_tana.TupTan_flattened_line_68454                    1127 0 +     13056 C
e Tupaia_chinensis.KB320831.1                             2788589 0 -   3938065 C
e Trachypithecus_pileatus.k141_469329                        1460 0 +      3372 C
e Trachypithecus_phayrei.ctg3                            44656450 0 -  44834318 C
e Trachypithecus_obscurus.k141_1115109                       1655 0 -     28054 C
e Trachypithecus_melamera.k141_238507                       11177 0 +     14732 C
e Trachypithecus_leucocephalus.k141_283605                  48002 0 +     51589 C
e Trachypithecus_laotum.k141_171445                          1640 0 +      3528 C
e Trachypithecus_hatinhensis.k141_357672                    22974 0 -     25040 C
e Trachypithecus_germaini.k141_809503                       15611 0 +     17312 C
e Trachypithecus_geei.k141_670367                           39612 0 -     54611 C
e Trachypithecus_francoisi.k141_1178450                      1666 0 -      3559 C
e Trachypithecus_cristatus.k141_27198                       22788 0 +     24652 C
e Trachypithecus_crepusculus.k141_1588528                   16890 0 -     32910 C
e Trachypithecus_auratus.k141_738098                        23163 0 +     38948 C
e Theropithecus_gelada.CM009951.1                       194004089 0 - 194193292 C
e Tarsius_wallacei.k141_48636                               56794 5 +     65473 I
e Tarsius_lariang.k141_609102                               23480 5 +     42269 I
e Spermophilus_dauricus.KZ294190.1                        2236948 0 +   2842873 C
e Sigmodon_hispidus.SigHis_scaffold_11332                   96366 0 -    120886 C
e Semnopithecus_vetulus.k141_642050                         31786 0 -     33692 C
e Semnopithecus_schistaceus.k141_653647                     22765 2 -     27512 I
e Semnopithecus_priam.k141_198153                            9345 0 -     12194 C
e Semnopithecus_johnii.k141_1351450                         38787 0 +     40653 C
e Semnopithecus_hypoleucos.k141_761524                       5053 0 +     20762 C
e Semnopithecus_entellus.k141_1527475                       24592 0 +     26421 C
e Sapajus_macrocephalus.k141_966464                         17491 0 -     62485 C
e Sapajus_apella.ctg10                                   17337891 0 -  30362882 C
e Saimiri_ustus.k141_1282476                                 1368 0 -     76454 C
e Saimiri_sciureus.k141_1947592                              1431 0 +     60816 C
e Saimiri_oerstedii.k141_841116                              1435 0 +     67014 C
e Saimiri_macrodon.k141_2087127                              1358 0 -     60842 C
e Saimiri_cassiquiarensis.k141_808270                        1415 0 +     34089 C
e Saimiri_boliviensis.NW_024100938.1                     15669549 0 -  43202129 C
e Rhinopithecus_strykeri.ctg4                            44851579 0 -  45163003 C
e Rhinopithecus_roxellana.NC_044549.1                   206373931 0 - 206558726 C
e Rhinopithecus_bieti.k119_102124                           12605 0 -     14454 C
e Rattus_norvegicus.chr11                                13912185 0 +  90463843 C
e Pygathrix_nigripes_a.k141_101123                             2049 0 +     18040 C
e Pygathrix_nigripes_b.ctg79                                 6802657 0 +   6970761 C
e Pygathrix_cinerea.k141_374971                             26168 0 +     56732 C
e Psammomys_obesus.NESX01026517.1                           30142 0 +     77221 C
e Propithecus_verreauxi.k141_158021                         36081 0 -     48185 C
e Propithecus_tattersalli.k141_907138                       13809 0 -     53241 C
e Propithecus_perrieri.k141_7554                            14167 0 +     27322 C
e Propithecus_edwardsi.k141_1317105                         32245 0 -     44753 C
e Propithecus_diadema.k141_577245                           39857 0 +     52369 C
e Propithecus_coronatus.k141_1353159                          526 0 +     11805 C
e Propithecus_coquerelli.NW_012147863.1                     13843 0 -     30946 C
e Prolemur_simus.MPIZ01000048.1                           6845375 0 +  12164890 C
e Presbytis_mitrata.k141_860013                              2177 0 +     14865 C
e Presbytis_comata.k141_672698                               2043 0 -     15069 C
e Plecturocebus_moloch.k141_890597                          20091 0 -     75465 C
e Plecturocebus_miltoni.k141_841561                          9501 0 +    134592 C
e Plecturocebus_hoffmannsi.k141_1595076                      6541 0 +      8943 C
e Plecturocebus_grovesi.k141_242819                         19781 0 +    152463 C
e Plecturocebus_dubius.k141_3565563                           428 0 -     55515 C
e Plecturocebus_cupreus.k141_1223294                        19962 0 -     23762 C
e Plecturocebus_cinerascens.k141_744510                     19712 0 +    147771 C
e Plecturocebus_caligatus.k141_2539816                      10111 0 -     98129 C
e Plecturocebus_brunneus.k141_498086                        19866 0 +     67491 C
e Plecturocebus_bernhardi.k141_959214                       19656 0 +     44506 C
e Pithecia_vanzolinii.k141_831006                           10249 0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13471341 0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          2347 0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                         9038 0 -     16101 C
e Pithecia_hirsuta.k141_1152968                              5840 0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        21889 0 +     78826 C
e Pithecia_albicans.k141_991845                             40460 0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000036.1               26736473 0 +  26888534 C
e Piliocolobus_kirkii.k141_557609                           18464 0 +     19957 C
e Piliocolobus_gordonorum.k141_902470                       21712 0 -     82327 C
e Piliocolobus_badius.k141_1497351                           1806 0 -      3310 C
e Peromyscus_maniculatus.KI615518.1                       4946752 0 -   8017169 C
e Perodicticus_potto.k141_713187                            21344 0 -     27972 C
e Perodicticus_ibeanus.k141_117958                           2047 0 -     23713 C
e Papio_ursinus.k141_3762866                                34121 0 +     35859 C
e Papio_papio.k141_3561084                                  13718 0 -     29451 C
e Papio_kindae.k141_5458022                                 63932 0 -    104429 C
e Papio_hamadryas.Contig15                               47509950 0 +  47705337 C
e Papio_cynocephalus.k141_386926                            48765 0 +     76494 C
e Papio_anubis.CM001492.2                               188152553 0 - 188283584 C
e Otolemur_garnettii.GL873528.1                          18005432 1 -  38779656 I
e Otolemur_crassicaudatus.k141_321880                       35991 1 +     38679 I
e Onychomys_torridus.OnyTor_scaffold_12578                  33578 0 +     62360 C
e Ondatra_zibethicus.OndZib_scaffold_6821                  121638 0 +    145789 C
e Octodon_degus.JH651621.1                                3678743 1836 +  10294119 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65666353 0 +  89412551 C
e Nycticebus_coucang.k141_2051882                             829 0 +      6470 C
e Nycticebus_bengalensis.LG16                            65563984 0 -  95554990 C
e Nasalis_larvatus.k141_153429                               4805 0 +     48152 C
e Nannospalax_galili.KL204535.1                           2056859 0 +   2354432 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     87101 0 -    117718 C
e Muscardinus_avellanarius.MusAve_scaffold_9643              8136 1 +     98495 I
e Mus_spretus.CM004110.1                                 74327278 6 +  97876770 I
e Mus_pahari.LT608305.1                                  67552266 6 +  89017189 I
e Mus_musculus.chr16                                     75486102 6 +  98207768 I
e Mus_caroli.LT608236.1                                  70763028 6 +  92629107 I
e Mirza_zaza.k141_226143                                     2531 0 +      8497 C
e Miopithecus_ogouensis.k141_2666161                        32424 0 +     34273 C
e Microcebus_murinus.CM007691.1                          16507118 0 +  47401472 C
e Mesocricetus_auratus.KB708139.1                         1043418 6 -  26018355 I
e Meriones_unguiculatus.MerUng_scaffold_52233                8613 0 +     15977 C
e Marmota_marmota.CZRN01000005.1                         36870872 0 +  64221397 C
e Mandrillus_sphinx.Contig144                             4446595 0 -   4543643 C
e Mandrillus_leucophaeus.scaffold125                     43433769 0 -  43563597 C
e Macaca_tonkeana.k141_2870633                               1908 0 -     27140 C
e Macaca_thibetana.k99_116940                                4326 0 -      5978 C
e Macaca_silenus.Contig12                                43837103 0 +  43892939 C
e Macaca_siberu.k141_741907                                 12066 0 -     55006 C
e Macaca_radiata.k141_1580474                                1733 0 -      3617 C
e Macaca_nigra.k141_282495                                   1903 0 -     46448 C
e Macaca_nemestrina.KQ004885.1                           11441980 0 +  11645122 C
e Macaca_mulatta.NC_041755.1                            196031874 0 + 196197964 C
e Macaca_maura.k141_251854                                  42956 0 -     79256 C
e Macaca_leonina.k141_3421209                                1344 0 +      3017 C
e Macaca_fuscata.k119_1068107                               11771 0 +     12679 C
e Macaca_fascicularis.k141_155037                           43195 0 +     63263 C
e Macaca_cyclopis.k119_1168412                               4894 0 +      6569 C
e Macaca_assamensis.Contig65                             12702798 0 +  12821369 C
e Macaca_arctoides.k141_2201161                             16292 0 +     74745 C
e Loris_tardigradus.ctg97                                 3775405 0 +   6799190 C
e Loris_lydekkerianus.k141_550999                            7654 0 +     84689 C
e Lophocebus_aterrimus.ctg55                             19244609 0 +  19376315 C
e Lepilemur_septentrionalis.k141_578524                     28536 0 -     33031 C
e Lepilemur_ruficaudatus.k141_617879                        75495 0 +    116806 C
e Lepilemur_dorsalis.k141_134267                            50273 0 +     63517 C
e Lepilemur_ankaranensis.k141_884009                        20899 0 +     39228 C
e Lemur_catta.scaffold_1                                258404001 0 - 285822530 C
e Lagothrix_lagothricha.k141_12968                          46966 0 -    147782 C
e Ictidomys_tridecemlineatus.JH393315.1                   7123028 0 +  13083262 C
e Hystrix_cristata.HysCri_scaffold_50788                     3134 0 +     22540 C
e Heterocephalus_glaber.JH602058.1                        2548028 229 +  31725842 I
e Hapalemur_occidentalis.k141_797938                        42319 0 -     54384 C
e Hapalemur_meridionalis.k141_186231                        25722 0 -     42470 C
e Hapalemur_griseus.k141_1387522                             2449 0 +     56096 C
e Hapalemur_gilberti.k141_97962                             24995 0 +     26611 C
e Hapalemur_alaotrensis.k141_1198205                         2515 0 +      3980 C
e Graphiurus_murinus.GraMur_scaffold_4493                   74176 1 +    118900 I
e Galagoides_demidoff.k141_1769638                           7353 0 +     27357 C
e Galago_senegalensis.k141_964197                           10303 0 -     43889 C
e Galago_moholi.ctg555                                     207923 0 -    847004 C
e Fukomys_damarensis.KN123630.1                          13889876 0 -  19261668 C
e Eulemur_sanfordi.k141_186399                              12739 1 -     29447 I
e Eulemur_rufus.k141_1620292                                30016 1 +     46535 I
e Eulemur_rubriventer.k141_411740                           15288 1 +     26808 I
e Eulemur_mongoz.k141_825972                                12827 1 +     27497 I
e Eulemur_macaco.k141_1341545                               12550 1 +     16540 I
e Eulemur_fulvus.k141_653297                                 8176 1 +    109717 I
e Eulemur_flavifrons.k141_903901                             4688 1 +     60246 I
e Eulemur_coronatus.k141_3240342                             8372 1 +     36558 I
e Eulemur_collaris.k141_311830                               1900 0 -      6809 C
e Eulemur_albifrons.k141_715837                              1964 1 +     13586 I
e Erythrocebus_patas.Contig8                             48767522 0 -  48907691 C
e Ellobius_talpinus.LOJH01090055.1                           3164 0 -      7838 C
e Ellobius_lutescens.LOEQ01003611.1                        236156 0 -    369425 C
e Dolichotis_patagonum.DolPat_scaffold_14102                33375 0 -     73477 C
e Daubentonia_madagascariensis.ctg11                     16841773 0 +  31942871 C
e Dasyprocta_punctata.DasPun_flattened_line_634             56104 16 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                14631 16 +     26546 I
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 27476 0 -     67205 C
e Ctenodactylus_gundi.CteGun_scaffold_447                  205257 0 -    956709 C
e Cricetulus_griseus.LT883672.1                          53025688 0 +  72327488 C
e Cricetomys_gambianus.CriGam_scaffold_949                 274501 0 -    399297 C
e Colobus_polykomos.k141_1406057                            12561 0 +     23629 C
e Colobus_guereza.LG08                                  147660575 0 + 156195979 C
e Colobus_angolensis.KN985967.1                          10879417 0 +  10971483 C
e Chlorocebus_sabaeus.CM001963.2                        101140838 0 + 101219884 C
e Chlorocebus_pygerythrus.k141_1486215                      30389 0 -     53260 C
e Chlorocebus_aethiops.ctg22                             15135343 0 -  15256731 C
e Chiropotes_sagulatus.k141_773804                          12149 0 +     40510 C
e Chiropotes_israelita.k141_1189915                         67968 0 +    196370 C
e Chinchilla_lanigera.JH721867.1                         15958784 0 +  43084221 C
e Cheracebus_torquatus.k141_315545                          43127 0 +     54541 C
e Cheracebus_regulus.k141_2128895                           38452 0 +     57117 C
e Cheracebus_lugens.k141_203936                             19413 0 +     25473 C
e Cheracebus_lucifer.k141_619653                             2390 0 -     18223 C
e Cheirogaleus_medius.k141_133808                            4946 3 +     13308 I
e Cheirogaleus_major.k141_1157592                           55904 0 -     68416 C
e Cercopithecus_roloway.k141_3372345                         2062 0 -      4205 C
e Cercopithecus_pogonias.k141_1977419                        2537 0 -      4411 C
e Cercopithecus_petaurista.k141_2037881                      2737 0 -      4669 C
e Cercopithecus_nictitans.k141_675209                        1746 0 -      3443 C
e Cercopithecus_neglectus.k141_1474992                      31710 0 +     33420 C
e Cercopithecus_mona.ctg12                               46473883 0 +  46592721 C
e Cercopithecus_albogularis.ctg51                              11987130 0 +  12117833 C
e Cercopithecus_lowei.k141_623764                           20608 0 +     35983 C
e Cercopithecus_hamlyni.k141_381099                          1804 0 -      3505 C
e Cercopithecus_diana.k141_1490386                           1911 0 -      4022 C
e Cercopithecus_cephus.k141_598190                          25887 0 +     30494 C
e Cercopithecus_ascanius.k141_3371259                        1954 0 -      3853 C
e Cercocebus_torquatus.k141_3969582                         55513 0 -    107033 C
e Cercocebus_lunulatus.k141_3387186                         17982 0 -     19697 C
e Cercocebus_chrysogaster.k141_2951608                      52998 0 -     54931 C
e Cercocebus_atys.KQ010443.1                              6551521 0 +   6739814 C
e Cephalopachus_bancanus.k141_702587                         5043 0 +     21754 C
e Cebus_unicolor.k141_239009                                 9374 0 +     25043 C
e Cebus_olivaceus.k141_93739                                 5131 0 -     26817 C
e Cebus_albifrons.Contig22                               18887587 0 -  29618158 C
e Cavia_tschudii.CavTsc_scaffold_488                       173989 0 +    436027 C
e Cavia_porcellus.DS562889.1                             15795798 0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15783848 16 -  24422027 I
e Castor_canadensis.CasCan_scaffold_47037                   27416 1 +     33760 I
e Carlito_syrichta.NW_007248099.1                          306002 0 +    345090 C
e Capromys_pilorides.CapPil_scaffold_647363                  1402 3 +      1887 I
e Cacajao_melanocephalus.k141_1160263                        4361 0 -    134917 C
e Cacajao_hosomi.k141_303789                                11821 0 -    216513 C
e Cacajao_calvus.k141_96166                                  9773 0 +    125063 C
e Cacajao_ayresi.k141_724503                               110747 0 -    171031 C
e Avahi_peyrierasi.k141_767228                               9546 0 -      9688 C
e Avahi_laniger.k141_2840928                                 3597 0 -     16375 C
e Ateles_paniscus.k141_1631200                               2843 0 -     25888 C
e Ateles_marginatus.k141_899112                             60892 0 +    119057 C
e Ateles_geoffroyi_a.k141_1300742                             12906 0 -     58268 C
e Ateles_chamek.k141_1072810                                 8396 0 +     89302 C
e Ateles_belzebuth.k141_1348307                             57397 0 +     85812 C
e Ateles_geoffroyi_b.tarseq_2582                             9536113 0 +  39197703 C
e Arctocebus_calabarensis.k141_1161114                      14850 0 +     17483 C
e Aotus_vociferans.k141_718647                               2850 0 +     23246 C
e Aotus_trivirgatus.k141_1740727                             2841 0 -    104377 C
e Aotus_nancymaae.KZ196176.1                              5746260 0 +   9889416 C
e Aotus_griseimembra.k141_3275623                            2302 0 +     22701 C
e Aotus_azarae.k141_3170768                                 59372 0 +     78111 C
e Alouatta_seniculus.k141_990213                             3658 0 +      6429 C
e Alouatta_puruensis.k141_1284840                             725 0 -      4927 C
e Alouatta_palliata.k141_1316127                             6927 0 +     10410 C
e Alouatta_nigerrima.k141_2718643                            3640 0 +      7047 C
e Alouatta_macconnelli.k141_1331706                          6985 0 -     10438 C
e Alouatta_juara.k141_1856473                                6071 0 +      7227 C
e Alouatta_discolor.k141_811576                              7689 0 -     21359 C
e Alouatta_caraya.k141_5460                                  8128 0 -     11521 C
e Alouatta_belzebul.k141_1818029                             7012 0 -     18050 C
e Allochrocebus_solatus.k141_787528                          1833 0 +      3797 C
e Allochrocebus_preussi.k141_1202907                         2257 0 +     72529 C
e Allochrocebus_lhoesti.k141_4825038                        51533 0 +     53391 C
e Allenopithecus_nigroviridis.k141_3103707                  59725 0 +     61638 C
e Acomys_cahirinus.AcoCah_scaffold_1625                    109064 0 -    189883 C
e Nomascus_siki_b.tarseq_80                             21685 3 -  18771707 I
e Nomascus_annamensis.k141_1223136                          10579 3 -     11253 I
e Symphalangus_syndactylus.tarseq_24                     13898744 3 +  13920577 I
e Pongo_pygmaeus.ctg62                                   19803901 3 +  19899266 I
e Pongo_abelii.NDHI03003816.1                              183997 3 -    373494 I
e Nomascus_gabriellae.k141_906566                            1211 3 -      2544 I
e Nomascus_concolor.k141_468488                              1222 3 -      1482 I
e Hoolock_leuconedys.ctg649                                    98773 3 +    115816 I

a score=0.000000
s hg38.chr4_GL000008v2_random                                8710 2 +    209709 TC
s Gorilla_beringei.k141_111300                               2108 2 -     14630 CT
i Gorilla_beringei.k141_111300                          I 2 C 0
s Gorilla_gorilla.LT578340.1                            119649207 2 - 195582420 tt
i Gorilla_gorilla.LT578340.1                            I 3 C 0
s Hoolock_leuconedys.ctg649                                    98776 2 +    115816 CT
i Hoolock_leuconedys.ctg649                                I 3 C 0
s Hylobates_abbotti.k141_493872                              1913 2 +      5897 CT
i Hylobates_abbotti.k141_493872                         I 3 C 0
s Hylobates_agilis.k141_282275                               1126 2 +      1846 CT
i Hylobates_agilis.k141_282275                          I 3 C 0
s Hylobates_klossii.k141_584463                               290 2 -      1009 ct
i Hylobates_klossii.k141_584463                         I 3 C 0
s Hylobates_muelleri.k141_1133650                            1348 2 -      2775 ct
i Hylobates_muelleri.k141_1133650                       I 3 C 0
s Hylobates_pileatus_a.tarseq_592                             29951 2 -     60944 ct
i Hylobates_pileatus_a.tarseq_592                         I 3 C 0
s Nomascus_annamensis.k141_1223136                          10582 2 -     11253 CT
i Nomascus_annamensis.k141_1223136                      I 3 C 0
s Nomascus_concolor.k141_468488                              1225 2 -      1482 CT
i Nomascus_concolor.k141_468488                         I 3 C 0
s Nomascus_gabriellae.k141_906566                            1214 2 -      2544 CT
i Nomascus_gabriellae.k141_906566                       I 3 C 0
s Nomascus_siki_b.tarseq_80                             21688 2 -  18771707 ct
i Nomascus_siki_b.tarseq_80                         I 3 C 0
s Nomascus_siki_a.k141_844529                                   962 2 +      2124 CT
i Nomascus_siki_a.k141_844529                             I 3 C 0
s Pan_paniscus.CM003386.1                               127571449 2 - 205426864 tt
i Pan_paniscus.CM003386.1                               I 3 I 2
s Pan_troglodytes.CM009241.2                            120148596 2 - 196562556 tt
i Pan_troglodytes.CM009241.2                            I 3 I 8
s Pongo_abelii.NDHI03003816.1                              184000 1 -    373494 c-
i Pongo_abelii.NDHI03003816.1                           I 3 C 0
s Pongo_pygmaeus.ctg62                                   19803904 2 +  19899266 CT
i Pongo_pygmaeus.ctg62                                  I 3 C 0
s Symphalangus_syndactylus.tarseq_24                     13898747 2 +  13920577 CT
i Symphalangus_syndactylus.tarseq_24                    I 3 C 0
e Sorex_araneus.JH798170.1                               17747650 0 -  27805282 C
e Dinomys_branickii.DinBra_scaffold_1996                   154649 0 +    228994 C
e Erinaceus_europaeus.JH835290.1                         11529683 0 +  16010500 C
e Chaetophractus_vellerosus.ChaVel_scaffold_1070855           279 0 -      1715 C
e Aplodontia_rufa.AprRuf_scaffold_156013                      909 0 +      5067 C
e Oryctolagus_cuniculus.CM000803.1                      141872640 3 + 163896628 I
e Ochotona_princeps.JH802095.1                            4992672 0 -  23139505 C
e Lepus_americanus.LepAme_scaffold_62849                     9991 3 +     22452 I
e Perognathus_longimembris.PerPac_flattened_line_22291      39945 1 -     45160 I
e Dipodomys_stephensi.DipSte_scaffold_44365                 23951 5 +     28912 I
e Dipodomys_ordii.KN672545.1                              3652397 5 +   4240102 I
e Suricata_suricatta.SurSur_flattened_line_20339            24377 0 +     62062 C
e Chrysochloris_asiatica.ChrAsi_scaffold_141308              5992 0 -     12508 C
e Ziphius_cavirostris.ZipCav_flattened_line_127025           4281 0 -      8775 C
e Zalophus_californianus.ZalCal_flattened_line_4097        211069 0 -    227762 C
e Vulpes_lagopus.VulLag_flattened_line_2045                134542 0 -    281493 C
e Vicugna_pacos.KN269600.1                                1522087 0 -   2331223 C
e Ursus_maritimus.KK498671.1                              6511394 0 +  28682327 C
e Uropsilus_gracilis.UroGra_scaffold_4143_0                 23954 0 -     25548 C
e Tursiops_truncatus.MRVK01000923.1                      69310778 0 -  96451834 C
e Trichechus_manatus.JH594618.1                          16078740 1 +  31416278 I
e Tragulus_javanicus.TraJav_scaffold_14717                   2634 0 +     90398 C
e Tonatia_saurophila.TonSau_scaffold_3334                  133289 0 -    259118 C
e Tolypeutes_matacus.TolMat_scaffold_269431                   999 0 +      6782 C
e Tapirus_terrestris.TapTer_scaffold_14939                  54814 0 +     99546 C
e Tapirus_indicus.TapInd_scaffold_176                      804154 0 +   1148477 C
e Tamandua_tetradactyla.TamTet_scaffold_26877               12147 0 +     45698 C
e Tadarida_brasiliensis.TadBra_scaffold_145589               3223 0 -      6213 C
e Sus_scrofa.CM000824.4                                 189269282 0 + 218635234 C
e Spilogale_gracilis.SpiGra_flattened_line_905             231807 0 -    276980 C
e Solenodon_paradoxus.SolPar_flattened_line_1012            15271 0 +    739146 C
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   28759 0 -    114521 C
e Saiga_tatarica.SaiTat_scaffold_82192                       5001 0 +     12214 C
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                16705 0 +    109198 C
e Rhinolophus_sinicus.LVEH01000179.1                      1784998 0 +   2252614 C
e Rangifer_tarandus.RanTarSib_scaffold_24239                13219 0 +     68503 C
e Puma_concolor.QAVW01000427.1                          131531126 0 - 161321710 C
e Pteropus_vampyrus.KN525959.1                             601356 0 -   3946241 C
e Pteropus_alecto.KB031157.1                             13243403 0 -  17261082 C
e Pteronura_brasiliensis.PteBra_flattened_line_1343        242810 0 -    344369 C
e Pteronotus_parnellii.KE867983.1                            1283 0 -     27784 C
e Procavia_capensis.ProCapCap_scaffold_15315                73365 0 +     78963 C
e Platanista_gangetica.PlaMin_flattened_line_72990           2744 0 +     21690 C
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            93631 8 +    112873 I
e Phocoena_phocoena.PhoPho_flattened_line_11948            118677 0 -    122454 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    112496 0 -    135482 C
e Pantholops_hodgsonii.KE114631.1                         1063571 0 -   1292953 C
e Panthera_tigris.KE721879.1                              5024314 0 -   6340057 C
e Panthera_pardus.KV860323.1                              3634536 0 +  18214204 C
e Panthera_onca.PanOnc_flattened_line_1615                  30933 0 +    295523 C
e Ovis_canadensis.OviCan_scaffold_6251                      75927 0 +    140051 C
e Ovis_aries.CM001582.2                                 134074713 0 - 275406953 C
e Otocyon_megalotis.JAEUCK010005121.1                      304472 0 -    505867 C
e Orycteropus_afer.OryAfe_flattened_line_13509              40522 0 -     66828 C
e Orcinus_orca.KB316965.1                                 7222060 0 -   7562323 C
e Okapia_johnstoni.LVCL01S0017931.1                         34297 0 +     78940 C
e Odocoileus_virginianus.KZ101650.1                       1077133 0 +   1425656 C
e Odobenus_rosmarus.KB229369.1                             676344 0 -   3126709 C
e Nyctereutes_procyonoides.CAJHUB010000786.1                27136 0 +   3668941 C
e Noctilio_leporinus.NocLep_scaffold_12062                  46733 0 +     94413 C
e Neophocaena_asiaeorientalis.KZ688543.1                  3948376 0 -   4490290 C
e Neomonachus_schauinslandi.NINY01007774.1                4481686 0 -  14209539 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             2473 0 -      8794 C
e Myotis_myotis.MyoMyo_scaffold_6123                         7641 0 +     66751 C
e Myotis_lucifugus.GL429887.1                             3462452 0 -   3747815 C
e Myotis_davidii.KB114863.1                               5016535 6 +   6462685 I
e Myotis_brandtii.KE161952.1                               964866 0 +   8389877 C
e Mustela_putorius.JH417978.1                             4420930 0 -  28371801 C
e Murina_feae.MurFea_scaffold_2254                          16540 0 -    100666 C
e Mungos_mungo.MunMun_flattened_line_8729                  141708 0 -    168139 C
e Moschus_moschiferus.MosMos_scaffold_146101                 2010 0 -      4346 C
e Mormoops_blainvillei.MorMeg_scaffold_2952                158616 0 +    265003 C
e Monodon_monoceros.MonMon_M_scaffold_5598                 143767 0 +    154973 C
e Mirounga_angustirostris.MirAng_flattened_line_8852         8085 0 -    104932 C
e Miniopterus_schreibersii.MinSch_scaffold_24116            31487 0 +     45743 C
e Miniopterus_natalensis.LDJU01000022.1                   8206806 0 +  10048721 C
e Micronycteris_hirsuta.MicHir_scaffold_37978               20079 0 -     32043 C
e Microgale_talazaci.MicTal_scaffold_34660                  28445 0 -     48017 C
e Mesoplodon_bidens.MesBid_scaffold_183284                   1040 0 +      2166 C
e Mellivora_capensis.MelCap_flattened_line_1828            226043 0 -    226874 C
e Megaderma_lyra.MegLyr_scaffold_3562                       61675 0 -    234502 C
e Manis_pentadactyla.KN017078.1                             33468 0 +     58827 C
e Manis_javanica.JSZB01003966.1                            143401 0 +    252755 C
e Lycaon_pictus.CM007556.1                               11084141 0 +  39895028 C
e Loxodonta_africana.GL010040.1                          20588262 0 -  62548349 C
e Lipotes_vexillifer.KE558548.1                            133344 0 +   3060487 C
e Leptonychotes_weddellii.KB714749.1                      3082787 0 -   3498232 C
e Lasiurus_borealis.LasBor_scaffold_5102                   111019 7 -    115756 I
e Kogia_breviceps.KogBre_flattened_line_35920               21002 0 +     37189 C
e Inia_geoffrensis.IniGeo_flattened_line_66725               6168 0 +     17520 C
e Hyaena_hyaena.HyaHya_flattened_line_20729                 13080 6 -     67322 I
e Hipposideros_galeritus.HipGal_scaffold_104691              5067 0 -      9143 C
e Hipposideros_armiger.JXIK01001085.1                      275911 0 -    477199 C
e Hippopotamus_amphibius.HipAmp_scaffold_1308              144491 0 +    277961 C
e Heterohyrax_brucei.HetBruBak_scaffold_25354               53501 0 +     73687 C
e Hemitragus_hylocrius.HemHyl_scaffold_16669                24911 0 -     91191 C
e Helogale_parvula.HelPar_flattened_line_22962              14020 0 +     53719 C
e Giraffa_tippelskirchi.LVKQ01S012154.1                    178425 0 -    189561 C
e Felis_nigripes.FelNig_flattened_line_8080                 17975 0 +     52776 C
e Felis_catus_fca126.CM031420.1                         129276840 0 - 158578461 C
e Eubalaena_japonica.EubJap_flattened_line_7756             58809 0 +     89355 C
e Eschrichtius_robustus.EscRob_flattened_line_685          312380 0 +    330699 C
e Equus_przewalskii.ATBW01073585.1                          10086 0 +     92910 C
e Equus_caballus.CM000402.2                              13348596 0 +  41866177 C
e Equus_asinus.JREZ01000062.1                             5850093 0 -   7175178 C
e Enhydra_lutris.KZ291749.1                              85868545 0 +  99434291 C
e Elephantulus_edwardii.JH947210.1                        7803681 0 +  15467074 C
e Elaphurus_davidianus.JRFZ01086400.1                     1488900 0 +   1727528 C
e Eidolon_helvum.KE772537.1                                  9606 0 +     24177 C
e Echinops_telfairi.JH980316.1                           22991497 0 -  44670279 C
e Diceros_bicornis.DicBicMic_scaffold_170113                  624 0 +       818 C
e Dicerorhinus_sumatrensis.PEKH010003161.1                 319366 0 +    993696 C
e Desmodus_rotundus.KZ672188.1                           18696231 0 -  18957592 C
e Delphinapterus_leucas.KZ290064.1                       80034242 0 -  96802777 C
e Dasypus_novemcinctus.JH568778.1                          179083 6 -   6883506 I
e Cryptoprocta_ferox.CryFer_flattened_line_19014            48813 0 -     70449 C
e Crocidura_indochinensis.CroInd_scaffold_38409             16131 0 -     19186 C
e Craseonycteris_thonglongyai.CraTho_scaffold_22679         36617 0 -     40477 C
e Condylura_cristata.JH655880.1                          60610165 0 +  78930452 C
e Choloepus_hoffmanni.KN194586.1                           759207 0 +    964067 C
e Choloepus_didactylus.ChoDid_scaffold_36182                13901 0 -     21363 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_160623          459 0 -      9338 C
e Catagonus_wagneri.CatWag_scaffold_1305                   156215 0 -    276539 C
e Carollia_perspicillata.CarPer_scaffold_4436               56918 0 +     67245 C
e Capra_hircus.CM004562.1                               135703876 0 - 157403528 C
e Capra_aegagrus.CM003214.1                              21322649 0 + 157394656 C
e Canis_lupus_orion.HG994411.1                           16451719 0 -  44759192 C
e Canis_lupus_familiaris.chr31                           11084685 0 +  39895921 C
e Canis_lupus_dingo.QKWQ01001993.1                       11262156 0 -  35597290 C
e Canis_lupus_VD.CanFam_VD_scaffold_16982                   10514 0 +     87036 C
e CanFam4.chr31                                          11515497 0 +  39901454 C
e Camelus_ferus.KB016973.1                                2970444 0 +   6889770 C
e Camelus_dromedarius.KN271192.1                           394707 0 -  15254737 C
e Camelus_bactrianus.KN276303.1                           3217006 0 -   8989139 C
e Bubalus_bubalis.KI419065.1                              1228374 0 -   1914593 C
e Bos_taurus.CM000177.6                                 136292754 0 - 158972876 C
e Bos_mutus.JH883513.1                                     569398 0 -    998990 C
e Bos_indicus.CM003021.1                                138137021 0 - 161108492 C
e Bison_bison.KN264915.1                                  6556786 0 +   6870073 C
e Beatragus_hunteri.BeaHun_scaffold_21644                   40642 0 -     72089 C
e Balaenoptera_bonaerensis.DF502048.1                        2727 0 -     13118 C
e Balaenoptera_acutorostrata.KI537095.1                  26377496 0 +  51448160 C
e Artibeus_jamaicensis.ArtJam_scaffold_41619                 5879 0 -     29036 C
e Antilocapra_americana.AntAmePen_scaffold_42841            28175 0 +     33004 C
e Anoura_caudifer.AnoCau_scaffold_422                      387737 0 -    631301 C
e Ammotragus_lervia.NIVO01013474.1                        3517542 0 +   4113121 C
e Ailurus_fulgens.LNAC01000003.1                          7090823 0 -  16596857 C
e Ailuropoda_melanoleuca.LNAT01000321.1                  10654120 0 +  23371972 C
e Acinonyx_jubatus.LLWD01000356.1                         2030786 0 +   3721120 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16291 1 -    119109 I
e Glis_glis.GliGli_scaffold_79770                            9625 1 -     18683 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     12283 2 -     20485 I
e Jaculus_jaculus.JH725517.1                              8561873 2 +  11848649 I
e Allactaga_bullata.AllBul_scaffold_70162                    8911 2 -     22067 I
e Galeopterus_variegatus.GalVar_scaffold_354               153220 0 +    324696 C
e Microtus_ochrogaster.CM001673.1                        22816305 0 -  98408828 C
e Xerus_inauris.XerIna_scaffold_7898                       124051 0 -    134049 C
e Varecia_variegata.k141_775891                             21766 0 -     33872 C
e Varecia_rubra.k141_432109                                  2220 0 -     20643 C
e Tupaia_tana.TupTan_flattened_line_68454                    1127 0 +     13056 C
e Tupaia_chinensis.KB320831.1                             2788589 0 -   3938065 C
e Trachypithecus_pileatus.k141_469329                        1460 0 +      3372 C
e Trachypithecus_phayrei.ctg3                            44656450 0 -  44834318 C
e Trachypithecus_obscurus.k141_1115109                       1655 0 -     28054 C
e Trachypithecus_melamera.k141_238507                       11177 0 +     14732 C
e Trachypithecus_leucocephalus.k141_283605                  48002 0 +     51589 C
e Trachypithecus_laotum.k141_171445                          1640 0 +      3528 C
e Trachypithecus_hatinhensis.k141_357672                    22974 0 -     25040 C
e Trachypithecus_germaini.k141_809503                       15611 0 +     17312 C
e Trachypithecus_geei.k141_670367                           39612 0 -     54611 C
e Trachypithecus_francoisi.k141_1178450                      1666 0 -      3559 C
e Trachypithecus_cristatus.k141_27198                       22788 0 +     24652 C
e Trachypithecus_crepusculus.k141_1588528                   16890 0 -     32910 C
e Trachypithecus_auratus.k141_738098                        23163 0 +     38948 C
e Theropithecus_gelada.CM009951.1                       194004089 0 - 194193292 C
e Tarsius_wallacei.k141_48636                               56794 5 +     65473 I
e Tarsius_lariang.k141_609102                               23480 5 +     42269 I
e Spermophilus_dauricus.KZ294190.1                        2236948 0 +   2842873 C
e Sigmodon_hispidus.SigHis_scaffold_11332                   96366 0 -    120886 C
e Semnopithecus_vetulus.k141_642050                         31786 0 -     33692 C
e Semnopithecus_schistaceus.k141_653647                     22765 2 -     27512 I
e Semnopithecus_priam.k141_198153                            9345 0 -     12194 C
e Semnopithecus_johnii.k141_1351450                         38787 0 +     40653 C
e Semnopithecus_hypoleucos.k141_761524                       5053 0 +     20762 C
e Semnopithecus_entellus.k141_1527475                       24592 0 +     26421 C
e Sapajus_macrocephalus.k141_966464                         17491 0 -     62485 C
e Sapajus_apella.ctg10                                   17337891 0 -  30362882 C
e Saimiri_ustus.k141_1282476                                 1368 0 -     76454 C
e Saimiri_sciureus.k141_1947592                              1431 0 +     60816 C
e Saimiri_oerstedii.k141_841116                              1435 0 +     67014 C
e Saimiri_macrodon.k141_2087127                              1358 0 -     60842 C
e Saimiri_cassiquiarensis.k141_808270                        1415 0 +     34089 C
e Saimiri_boliviensis.NW_024100938.1                     15669549 0 -  43202129 C
e Rhinopithecus_strykeri.ctg4                            44851579 0 -  45163003 C
e Rhinopithecus_roxellana.NC_044549.1                   206373931 0 - 206558726 C
e Rhinopithecus_bieti.k119_102124                           12605 0 -     14454 C
e Rattus_norvegicus.chr11                                13912185 0 +  90463843 C
e Pygathrix_nigripes_a.k141_101123                             2049 0 +     18040 C
e Pygathrix_nigripes_b.ctg79                                 6802657 0 +   6970761 C
e Pygathrix_cinerea.k141_374971                             26168 0 +     56732 C
e Psammomys_obesus.NESX01026517.1                           30142 0 +     77221 C
e Propithecus_verreauxi.k141_158021                         36081 0 -     48185 C
e Propithecus_tattersalli.k141_907138                       13809 0 -     53241 C
e Propithecus_perrieri.k141_7554                            14167 0 +     27322 C
e Propithecus_edwardsi.k141_1317105                         32245 0 -     44753 C
e Propithecus_diadema.k141_577245                           39857 0 +     52369 C
e Propithecus_coronatus.k141_1353159                          526 0 +     11805 C
e Propithecus_coquerelli.NW_012147863.1                     13843 0 -     30946 C
e Prolemur_simus.MPIZ01000048.1                           6845375 0 +  12164890 C
e Presbytis_mitrata.k141_860013                              2177 0 +     14865 C
e Presbytis_comata.k141_672698                               2043 0 -     15069 C
e Plecturocebus_moloch.k141_890597                          20091 0 -     75465 C
e Plecturocebus_miltoni.k141_841561                          9501 0 +    134592 C
e Plecturocebus_hoffmannsi.k141_1595076                      6541 0 +      8943 C
e Plecturocebus_grovesi.k141_242819                         19781 0 +    152463 C
e Plecturocebus_dubius.k141_3565563                           428 0 -     55515 C
e Plecturocebus_cupreus.k141_1223294                        19962 0 -     23762 C
e Plecturocebus_cinerascens.k141_744510                     19712 0 +    147771 C
e Plecturocebus_caligatus.k141_2539816                      10111 0 -     98129 C
e Plecturocebus_brunneus.k141_498086                        19866 0 +     67491 C
e Plecturocebus_bernhardi.k141_959214                       19656 0 +     44506 C
e Pithecia_vanzolinii.k141_831006                           10249 0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13471341 0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          2347 0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                         9038 0 -     16101 C
e Pithecia_hirsuta.k141_1152968                              5840 0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        21889 0 +     78826 C
e Pithecia_albicans.k141_991845                             40460 0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000036.1               26736473 0 +  26888534 C
e Piliocolobus_kirkii.k141_557609                           18464 0 +     19957 C
e Piliocolobus_gordonorum.k141_902470                       21712 0 -     82327 C
e Piliocolobus_badius.k141_1497351                           1806 0 -      3310 C
e Peromyscus_maniculatus.KI615518.1                       4946752 0 -   8017169 C
e Perodicticus_potto.k141_713187                            21344 0 -     27972 C
e Perodicticus_ibeanus.k141_117958                           2047 0 -     23713 C
e Papio_ursinus.k141_3762866                                34121 0 +     35859 C
e Papio_papio.k141_3561084                                  13718 0 -     29451 C
e Papio_kindae.k141_5458022                                 63932 0 -    104429 C
e Papio_hamadryas.Contig15                               47509950 0 +  47705337 C
e Papio_cynocephalus.k141_386926                            48765 0 +     76494 C
e Papio_anubis.CM001492.2                               188152553 0 - 188283584 C
e Otolemur_garnettii.GL873528.1                          18005432 1 -  38779656 I
e Otolemur_crassicaudatus.k141_321880                       35991 1 +     38679 I
e Onychomys_torridus.OnyTor_scaffold_12578                  33578 0 +     62360 C
e Ondatra_zibethicus.OndZib_scaffold_6821                  121638 0 +    145789 C
e Octodon_degus.JH651621.1                                3678743 1836 +  10294119 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65666353 0 +  89412551 C
e Nycticebus_coucang.k141_2051882                             829 0 +      6470 C
e Nycticebus_bengalensis.LG16                            65563984 0 -  95554990 C
e Nasalis_larvatus.k141_153429                               4805 0 +     48152 C
e Nannospalax_galili.KL204535.1                           2056859 0 +   2354432 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     87101 0 -    117718 C
e Muscardinus_avellanarius.MusAve_scaffold_9643              8136 1 +     98495 I
e Mus_spretus.CM004110.1                                 74327278 6 +  97876770 I
e Mus_pahari.LT608305.1                                  67552266 6 +  89017189 I
e Mus_musculus.chr16                                     75486102 6 +  98207768 I
e Mus_caroli.LT608236.1                                  70763028 6 +  92629107 I
e Mirza_zaza.k141_226143                                     2531 0 +      8497 C
e Miopithecus_ogouensis.k141_2666161                        32424 0 +     34273 C
e Microcebus_murinus.CM007691.1                          16507118 0 +  47401472 C
e Mesocricetus_auratus.KB708139.1                         1043418 6 -  26018355 I
e Meriones_unguiculatus.MerUng_scaffold_52233                8613 0 +     15977 C
e Marmota_marmota.CZRN01000005.1                         36870872 0 +  64221397 C
e Mandrillus_sphinx.Contig144                             4446595 0 -   4543643 C
e Mandrillus_leucophaeus.scaffold125                     43433769 0 -  43563597 C
e Macaca_tonkeana.k141_2870633                               1908 0 -     27140 C
e Macaca_thibetana.k99_116940                                4326 0 -      5978 C
e Macaca_silenus.Contig12                                43837103 0 +  43892939 C
e Macaca_siberu.k141_741907                                 12066 0 -     55006 C
e Macaca_radiata.k141_1580474                                1733 0 -      3617 C
e Macaca_nigra.k141_282495                                   1903 0 -     46448 C
e Macaca_nemestrina.KQ004885.1                           11441980 0 +  11645122 C
e Macaca_mulatta.NC_041755.1                            196031874 0 + 196197964 C
e Macaca_maura.k141_251854                                  42956 0 -     79256 C
e Macaca_leonina.k141_3421209                                1344 0 +      3017 C
e Macaca_fuscata.k119_1068107                               11771 0 +     12679 C
e Macaca_fascicularis.k141_155037                           43195 0 +     63263 C
e Macaca_cyclopis.k119_1168412                               4894 0 +      6569 C
e Macaca_assamensis.Contig65                             12702798 0 +  12821369 C
e Macaca_arctoides.k141_2201161                             16292 0 +     74745 C
e Loris_tardigradus.ctg97                                 3775405 0 +   6799190 C
e Loris_lydekkerianus.k141_550999                            7654 0 +     84689 C
e Lophocebus_aterrimus.ctg55                             19244609 0 +  19376315 C
e Lepilemur_septentrionalis.k141_578524                     28536 0 -     33031 C
e Lepilemur_ruficaudatus.k141_617879                        75495 0 +    116806 C
e Lepilemur_dorsalis.k141_134267                            50273 0 +     63517 C
e Lepilemur_ankaranensis.k141_884009                        20899 0 +     39228 C
e Lemur_catta.scaffold_1                                258404001 0 - 285822530 C
e Lagothrix_lagothricha.k141_12968                          46966 0 -    147782 C
e Ictidomys_tridecemlineatus.JH393315.1                   7123028 0 +  13083262 C
e Hystrix_cristata.HysCri_scaffold_50788                     3134 0 +     22540 C
e Heterocephalus_glaber.JH602058.1                        2548028 229 +  31725842 I
e Hapalemur_occidentalis.k141_797938                        42319 0 -     54384 C
e Hapalemur_meridionalis.k141_186231                        25722 0 -     42470 C
e Hapalemur_griseus.k141_1387522                             2449 0 +     56096 C
e Hapalemur_gilberti.k141_97962                             24995 0 +     26611 C
e Hapalemur_alaotrensis.k141_1198205                         2515 0 +      3980 C
e Graphiurus_murinus.GraMur_scaffold_4493                   74176 1 +    118900 I
e Galagoides_demidoff.k141_1769638                           7353 0 +     27357 C
e Galago_senegalensis.k141_964197                           10303 0 -     43889 C
e Galago_moholi.ctg555                                     207923 0 -    847004 C
e Fukomys_damarensis.KN123630.1                          13889876 0 -  19261668 C
e Eulemur_sanfordi.k141_186399                              12739 1 -     29447 I
e Eulemur_rufus.k141_1620292                                30016 1 +     46535 I
e Eulemur_rubriventer.k141_411740                           15288 1 +     26808 I
e Eulemur_mongoz.k141_825972                                12827 1 +     27497 I
e Eulemur_macaco.k141_1341545                               12550 1 +     16540 I
e Eulemur_fulvus.k141_653297                                 8176 1 +    109717 I
e Eulemur_flavifrons.k141_903901                             4688 1 +     60246 I
e Eulemur_coronatus.k141_3240342                             8372 1 +     36558 I
e Eulemur_collaris.k141_311830                               1900 0 -      6809 C
e Eulemur_albifrons.k141_715837                              1964 1 +     13586 I
e Erythrocebus_patas.Contig8                             48767522 0 -  48907691 C
e Ellobius_talpinus.LOJH01090055.1                           3164 0 -      7838 C
e Ellobius_lutescens.LOEQ01003611.1                        236156 0 -    369425 C
e Dolichotis_patagonum.DolPat_scaffold_14102                33375 0 -     73477 C
e Daubentonia_madagascariensis.ctg11                     16841773 0 +  31942871 C
e Dasyprocta_punctata.DasPun_flattened_line_634             56104 16 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                14631 16 +     26546 I
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 27476 0 -     67205 C
e Ctenodactylus_gundi.CteGun_scaffold_447                  205257 0 -    956709 C
e Cricetulus_griseus.LT883672.1                          53025688 0 +  72327488 C
e Cricetomys_gambianus.CriGam_scaffold_949                 274501 0 -    399297 C
e Colobus_polykomos.k141_1406057                            12561 0 +     23629 C
e Colobus_guereza.LG08                                  147660575 0 + 156195979 C
e Colobus_angolensis.KN985967.1                          10879417 0 +  10971483 C
e Chlorocebus_sabaeus.CM001963.2                        101140838 0 + 101219884 C
e Chlorocebus_pygerythrus.k141_1486215                      30389 0 -     53260 C
e Chlorocebus_aethiops.ctg22                             15135343 0 -  15256731 C
e Chiropotes_sagulatus.k141_773804                          12149 0 +     40510 C
e Chiropotes_israelita.k141_1189915                         67968 0 +    196370 C
e Chinchilla_lanigera.JH721867.1                         15958784 0 +  43084221 C
e Cheracebus_torquatus.k141_315545                          43127 0 +     54541 C
e Cheracebus_regulus.k141_2128895                           38452 0 +     57117 C
e Cheracebus_lugens.k141_203936                             19413 0 +     25473 C
e Cheracebus_lucifer.k141_619653                             2390 0 -     18223 C
e Cheirogaleus_medius.k141_133808                            4946 3 +     13308 I
e Cheirogaleus_major.k141_1157592                           55904 0 -     68416 C
e Cercopithecus_roloway.k141_3372345                         2062 0 -      4205 C
e Cercopithecus_pogonias.k141_1977419                        2537 0 -      4411 C
e Cercopithecus_petaurista.k141_2037881                      2737 0 -      4669 C
e Cercopithecus_nictitans.k141_675209                        1746 0 -      3443 C
e Cercopithecus_neglectus.k141_1474992                      31710 0 +     33420 C
e Cercopithecus_mona.ctg12                               46473883 0 +  46592721 C
e Cercopithecus_albogularis.ctg51                              11987130 0 +  12117833 C
e Cercopithecus_lowei.k141_623764                           20608 0 +     35983 C
e Cercopithecus_hamlyni.k141_381099                          1804 0 -      3505 C
e Cercopithecus_diana.k141_1490386                           1911 0 -      4022 C
e Cercopithecus_cephus.k141_598190                          25887 0 +     30494 C
e Cercopithecus_ascanius.k141_3371259                        1954 0 -      3853 C
e Cercocebus_torquatus.k141_3969582                         55513 0 -    107033 C
e Cercocebus_lunulatus.k141_3387186                         17982 0 -     19697 C
e Cercocebus_chrysogaster.k141_2951608                      52998 0 -     54931 C
e Cercocebus_atys.KQ010443.1                              6551521 0 +   6739814 C
e Cephalopachus_bancanus.k141_702587                         5043 0 +     21754 C
e Cebus_unicolor.k141_239009                                 9374 0 +     25043 C
e Cebus_olivaceus.k141_93739                                 5131 0 -     26817 C
e Cebus_albifrons.Contig22                               18887587 0 -  29618158 C
e Cavia_tschudii.CavTsc_scaffold_488                       173989 0 +    436027 C
e Cavia_porcellus.DS562889.1                             15795798 0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15783848 16 -  24422027 I
e Castor_canadensis.CasCan_scaffold_47037                   27416 1 +     33760 I
e Carlito_syrichta.NW_007248099.1                          306002 0 +    345090 C
e Capromys_pilorides.CapPil_scaffold_647363                  1402 3 +      1887 I
e Cacajao_melanocephalus.k141_1160263                        4361 0 -    134917 C
e Cacajao_hosomi.k141_303789                                11821 0 -    216513 C
e Cacajao_calvus.k141_96166                                  9773 0 +    125063 C
e Cacajao_ayresi.k141_724503                               110747 0 -    171031 C
e Avahi_peyrierasi.k141_767228                               9546 0 -      9688 C
e Avahi_laniger.k141_2840928                                 3597 0 -     16375 C
e Ateles_paniscus.k141_1631200                               2843 0 -     25888 C
e Ateles_marginatus.k141_899112                             60892 0 +    119057 C
e Ateles_geoffroyi_a.k141_1300742                             12906 0 -     58268 C
e Ateles_chamek.k141_1072810                                 8396 0 +     89302 C
e Ateles_belzebuth.k141_1348307                             57397 0 +     85812 C
e Ateles_geoffroyi_b.tarseq_2582                             9536113 0 +  39197703 C
e Arctocebus_calabarensis.k141_1161114                      14850 0 +     17483 C
e Aotus_vociferans.k141_718647                               2850 0 +     23246 C
e Aotus_trivirgatus.k141_1740727                             2841 0 -    104377 C
e Aotus_nancymaae.KZ196176.1                              5746260 0 +   9889416 C
e Aotus_griseimembra.k141_3275623                            2302 0 +     22701 C
e Aotus_azarae.k141_3170768                                 59372 0 +     78111 C
e Alouatta_seniculus.k141_990213                             3658 0 +      6429 C
e Alouatta_puruensis.k141_1284840                             725 0 -      4927 C
e Alouatta_palliata.k141_1316127                             6927 0 +     10410 C
e Alouatta_nigerrima.k141_2718643                            3640 0 +      7047 C
e Alouatta_macconnelli.k141_1331706                          6985 0 -     10438 C
e Alouatta_juara.k141_1856473                                6071 0 +      7227 C
e Alouatta_discolor.k141_811576                              7689 0 -     21359 C
e Alouatta_caraya.k141_5460                                  8128 0 -     11521 C
e Alouatta_belzebul.k141_1818029                             7012 0 -     18050 C
e Allochrocebus_solatus.k141_787528                          1833 0 +      3797 C
e Allochrocebus_preussi.k141_1202907                         2257 0 +     72529 C
e Allochrocebus_lhoesti.k141_4825038                        51533 0 +     53391 C
e Allenopithecus_nigroviridis.k141_3103707                  59725 0 +     61638 C
e Acomys_cahirinus.AcoCah_scaffold_1625                    109064 0 -    189883 C

a score=0.000000
s hg38.chr4_GL000008v2_random                                8712 5 +    209709 TTTTT
s Acinonyx_jubatus.LLWD01000356.1                         2030786 1 +   3721120 ---T-
i Acinonyx_jubatus.LLWD01000356.1                       C 0 I 5
s Acomys_cahirinus.AcoCah_scaffold_1625                    109064 1 -    189883 ---T-
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 I 6
s Ailuropoda_melanoleuca.LNAT01000321.1                  10654120 1 +  23371972 ---T-
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 I 5
s Ailurus_fulgens.LNAC01000003.1                          7090823 1 -  16596857 ---C-
i Ailurus_fulgens.LNAC01000003.1                        C 0 I 5
s Allenopithecus_nigroviridis.k141_3103707                  59725 2 +     61638 ---TT
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        51533 2 +     53391 ---TT
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         2257 2 +     72529 ---TT
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          1833 2 +      3797 ---TT
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             7012 2 -     18050 ---TA
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  8128 2 -     11521 ---TA
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              7689 2 -     21359 ---TA
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1856473                                6071 2 +      7227 ---TA
i Alouatta_juara.k141_1856473                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          6985 2 -     10438 ---TA
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            3640 2 +      7047 ---TA
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             6927 2 +     10410 ---TA
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                             725 2 -      4927 ---TA
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             3658 2 +      6429 ---TA
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3517542 1 +   4113121 ---T-
i Ammotragus_lervia.NIVO01013474.1                      C 0 I 4
s Anoura_caudifer.AnoCau_scaffold_422                      387737 1 -    631301 ---T-
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 I 4
s Antilocapra_americana.AntAmePen_scaffold_42841            28175 1 +     33004 ---T-
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 I 4
s Aotus_azarae.k141_3170768                                 59372 2 +     78111 ---TA
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            2302 2 +     22701 ---TA
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5746260 2 +   9889416 ---ta
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             2841 2 -    104377 ---TA
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               2850 2 +     23246 ---TA
i Aotus_vociferans.k141_718647                          C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      14850 2 +     17483 ---TT
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 5879 1 -     29036 ---T-
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 I 4
s Ateles_geoffroyi_b.tarseq_2582                             9536113 2 +  39197703 ---TA
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             57397 2 +     85812 ---TA
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 8396 2 +     89302 ---TA
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             12906 2 -     58268 ---TA
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             60892 2 +    119057 ---TA
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               2843 2 -     25888 ---TA
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 3597 1 -     16375 ----T
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_767228                               9546 1 -      9688 ----T
i Avahi_peyrierasi.k141_767228                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26377496 1 +  51448160 ---T-
i Balaenoptera_acutorostrata.KI537095.1                 C 0 I 4
s Balaenoptera_bonaerensis.DF502048.1                        2727 1 -     13118 ---T-
i Balaenoptera_bonaerensis.DF502048.1                   C 0 I 4
s Beatragus_hunteri.BeaHun_scaffold_21644                   40642 1 -     72089 ---T-
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 I 4
s Bison_bison.KN264915.1                                  6556786 1 +   6870073 ---T-
i Bison_bison.KN264915.1                                C 0 I 4
s Bos_indicus.CM003021.1                                138137021 1 - 161108492 ---T-
i Bos_indicus.CM003021.1                                C 0 I 4
s Bos_mutus.JH883513.1                                     569398 1 -    998990 ---T-
i Bos_mutus.JH883513.1                                  C 0 I 4
s Bos_taurus.CM000177.6                                 136292754 1 - 158972876 ---T-
i Bos_taurus.CM000177.6                                 C 0 I 4
s Bubalus_bubalis.KI419065.1                              1228374 1 -   1914593 ---T-
i Bubalus_bubalis.KI419065.1                            C 0 I 4
s Cacajao_ayresi.k141_724503                               110747 2 -    171031 ---TA
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                  9773 2 +    125063 ---TA
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                11821 2 -    216513 ---TA
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        4361 2 -    134917 ---TA
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3217006 1 -   8989139 ---t-
i Camelus_bactrianus.KN276303.1                         C 0 I 4
s Camelus_dromedarius.KN271192.1                           394707 1 -  15254737 ---t-
i Camelus_dromedarius.KN271192.1                        C 0 I 4
s Camelus_ferus.KB016973.1                                2970444 1 +   6889770 ---t-
i Camelus_ferus.KB016973.1                              C 0 I 4
s CanFam4.chr31                                          11515497 1 +  39901454 ---T-
i CanFam4.chr31                                         C 0 I 5
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   10514 1 +     87036 ---T-
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 I 5
s Canis_lupus_dingo.QKWQ01001993.1                       11262156 1 -  35597290 ---t-
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 I 5
s Canis_lupus_familiaris.chr31                           11084685 1 +  39895921 ---t-
i Canis_lupus_familiaris.chr31                          C 0 I 5
s Canis_lupus_orion.HG994411.1                           16451719 1 -  44759192 ---t-
i Canis_lupus_orion.HG994411.1                          C 0 I 5
s Capra_aegagrus.CM003214.1                              21322649 1 + 157394656 ---T-
i Capra_aegagrus.CM003214.1                             C 0 I 4
s Capra_hircus.CM004562.1                               135703876 1 - 157403528 ---T-
i Capra_hircus.CM004562.1                               C 0 I 4
s Carlito_syrichta.NW_007248099.1                          306002 2 +    345090 ---tt
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               56918 1 +     67245 ---T-
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 I 4
s Castor_canadensis.CasCan_scaffold_47037                   27417 1 +     33760 ---T-
i Castor_canadensis.CasCan_scaffold_47037               I 1 I 2
s Catagonus_wagneri.CatWag_scaffold_1305                   156215 1 -    276539 ---T-
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 I 4
s Cebus_albifrons.Contig22                               18887587 2 -  29618158 ---TA
i Cebus_albifrons.Contig22                              C 0 I 1
s Cebus_olivaceus.k141_93739                                 5131 2 -     26817 ---TA
i Cebus_olivaceus.k141_93739                            C 0 I 1
s Cebus_unicolor.k141_239009                                 9374 2 +     25043 ---TA
i Cebus_unicolor.k141_239009                            C 0 I 1
s Cephalopachus_bancanus.k141_702587                         5043 2 +     21754 ---TT
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4360704 1 +   7569818 ---T-
i Ceratotherium_simum.JH767818.1                        C 0 I 5
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623          459 1 -      9338 ---T-
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 I 5
s Cercocebus_atys.KQ010443.1                              6551521 2 +   6739814 ---tt
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      52998 2 -     54931 ---TT
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         17982 2 -     19697 ---TT
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         55513 2 -    107033 ---TT
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        1954 2 -      3853 ---TT
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          25887 2 +     30494 ---TT
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           1911 2 -      4022 ---TT
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          1804 2 -      3505 ---TT
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           20608 2 +     35983 ---TT
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11987130 2 +  12117833 ---TT
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46473883 2 +  46592721 ---TT
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      31710 2 +     33420 ---TT
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        1746 2 -      3443 ---TT
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      2737 2 -      4669 ---TT
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        2537 2 -      4411 ---TT
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         2062 2 -      4205 ---TT
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_1070855           279 1 -      1715 ---T-
i Chaetophractus_vellerosus.ChaVel_scaffold_1070855     C 0 I 5
s Cheirogaleus_major.k141_1157592                           55904 1 -     68416 ----T
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            4949 1 +     13308 ----T
i Cheirogaleus_medius.k141_133808                       I 3 C 0
s Cheracebus_lucifer.k141_619653                             2390 2 -     18223 ---TA
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             19413 2 +     25473 ---TA
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           38452 2 +     57117 ---TA
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          43127 2 +     54541 ---TA
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15958784 1 +  43084221 ---T-
i Chinchilla_lanigera.JH721867.1                        C 0 I 2
s Chiropotes_israelita.k141_1189915                         67968 2 +    196370 ---TA
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          12149 2 +     40510 ---TA
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15135343 2 -  15256731 ---TT
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      30389 2 -     53260 ---TT
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101140838 2 + 101219884 ---tt
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                13901 1 -     21363 ---T-
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 I 3
s Choloepus_hoffmanni.KN194586.1                           759207 1 +    964067 ---T-
i Choloepus_hoffmanni.KN194586.1                        C 0 I 3
s Chrysochloris_asiatica.ChrAsi_scaffold_141308              5992 1 -     12508 ---T-
i Chrysochloris_asiatica.ChrAsi_scaffold_141308         C 0 I 7
s Colobus_angolensis.KN985967.1                          10879417 2 +  10971483 ---tt
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147660575 2 + 156195979 ---TT
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            12561 2 +     23629 ---TT
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60610165 1 +  78930452 ---t-
i Condylura_cristata.JH655880.1                         C 0 I 5
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         36617 1 -     40477 ---T-
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 I 4
s Cricetomys_gambianus.CriGam_scaffold_949                 274501 1 -    399297 ---T-
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 I 6
s Cricetulus_griseus.LT883672.1                          53025688 1 +  72327488 ---t-
i Cricetulus_griseus.LT883672.1                         C 0 I 6
s Crocidura_indochinensis.CroInd_scaffold_38409             16131 1 -     19186 ---A-
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 I 5
s Cryptoprocta_ferox.CryFer_flattened_line_19014            48813 1 -     70449 ---T-
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 I 5
s Ctenodactylus_gundi.CteGun_scaffold_447                  205257 1 -    956709 ---T-
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 I 2
s Dasypus_novemcinctus.JH568778.1                          179089 1 -   6883506 ---T-
i Dasypus_novemcinctus.JH568778.1                       I 6 I 4
s Daubentonia_madagascariensis.ctg11                     16841773 1 +  31942871 ----T
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80034242 1 -  96802777 ---T-
i Delphinapterus_leucas.KZ290064.1                      C 0 I 4
s Desmodus_rotundus.KZ672188.1                           18696231 1 -  18957592 ---T-
i Desmodus_rotundus.KZ672188.1                          C 0 I 4
s Dicerorhinus_sumatrensis.PEKH010003161.1                 319366 1 +    993696 ---T-
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 I 5
s Diceros_bicornis.DicBicMic_scaffold_170113                  624 1 +       818 ---T-
i Diceros_bicornis.DicBicMic_scaffold_170113            C 0 I 5
s Dinomys_branickii.DinBra_scaffold_1996                   154649 1 +    228994 ---T-
i Dinomys_branickii.DinBra_scaffold_1996                C 0 I 2
s Dipodomys_ordii.KN672545.1                              3652402 1 +   4240102 ---T-
i Dipodomys_ordii.KN672545.1                            I 5 I 2
s Dipodomys_stephensi.DipSte_scaffold_44365                 23956 1 +     28912 ---T-
i Dipodomys_stephensi.DipSte_scaffold_44365             I 5 I 2
s Echinops_telfairi.JH980316.1                           22991497 1 -  44670279 ---t-
i Echinops_telfairi.JH980316.1                          C 0 I 3
s Eidolon_helvum.KE772537.1                                  9606 1 +     24177 ---T-
i Eidolon_helvum.KE772537.1                             C 0 I 4
s Elaphurus_davidianus.JRFZ01086400.1                     1488900 1 +   1727528 ---T-
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 I 4
s Elephantulus_edwardii.JH947210.1                        7803681 1 +  15467074 ---T-
i Elephantulus_edwardii.JH947210.1                      C 0 I 3
s Ellobius_lutescens.LOEQ01003611.1                        236156 1 -    369425 ---T-
i Ellobius_lutescens.LOEQ01003611.1                     C 0 I 6
s Ellobius_talpinus.LOJH01090055.1                           3164 1 -      7838 ---t-
i Ellobius_talpinus.LOJH01090055.1                      C 0 I 6
s Enhydra_lutris.KZ291749.1                              85868545 1 +  99434291 ---C-
i Enhydra_lutris.KZ291749.1                             C 0 I 5
s Equus_asinus.JREZ01000062.1                             5850093 1 -   7175178 ---t-
i Equus_asinus.JREZ01000062.1                           C 0 I 5
s Equus_caballus.CM000402.2                              13348596 1 +  41866177 ---t-
i Equus_caballus.CM000402.2                             C 0 I 5
s Equus_przewalskii.ATBW01073585.1                          10086 1 +     92910 ---t-
i Equus_przewalskii.ATBW01073585.1                      C 0 I 5
s Erinaceus_europaeus.JH835290.1                         11529683 1 +  16010500 ---T-
i Erinaceus_europaeus.JH835290.1                        C 0 I 5
s Erythrocebus_patas.Contig8                             48767522 2 -  48907691 ---TT
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          312380 1 +    330699 ---T-
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 I 4
s Eubalaena_japonica.EubJap_flattened_line_7756             58809 1 +     89355 ---T-
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 I 4
s Eulemur_rubriventer.k141_411740                           15289 1 +     26808 ----T
i Eulemur_rubriventer.k141_411740                       I 1 C 0
s Felis_catus.CM001386.2                                129889766 1 - 159252932 ---T-
i Felis_catus.CM001386.2                                C 0 I 5
s Felis_catus_fca126.CM031420.1                         129276840 1 - 158578461 ---T-
i Felis_catus_fca126.CM031420.1                         C 0 I 5
s Felis_nigripes.FelNig_flattened_line_8080                 17975 1 +     52776 ---T-
i Felis_nigripes.FelNig_flattened_line_8080             C 0 I 5
s Galago_moholi.ctg555                                     207923 2 -    847004 ---TT
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           10303 2 -     43889 ---TT
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           7353 1 +     27357 ----T
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               153220 2 +    324696 ---TT
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    178425 1 -    189561 ---T-
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 I 4
s Glis_glis.GliGli_scaffold_79770                            9626 1 -     18683 ---T-
i Glis_glis.GliGli_scaffold_79770                       I 1 I 2
s Gorilla_beringei.k141_111300                               2110 5 -     14630 TTTTT
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119649209 5 - 195582420 ttttt
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   74177 1 +    118900 ---T-
i Graphiurus_murinus.GraMur_scaffold_4493               I 1 I 2
s Hapalemur_alaotrensis.k141_1198205                         2515 1 +      3980 ----T
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             24995 1 +     26611 ----T
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             2449 1 +     56096 ----T
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        25722 1 -     42470 ----t
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        42319 1 -     54384 ----t
i Hapalemur_occidentalis.k141_797938                    C 0 I 10
s Helogale_parvula.HelPar_flattened_line_22962              14020 1 +     53719 ---T-
i Helogale_parvula.HelPar_flattened_line_22962          C 0 I 5
s Hemitragus_hylocrius.HemHyl_scaffold_16669                24911 1 -     91191 ---T-
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 I 4
s Heterohyrax_brucei.HetBruBak_scaffold_25354               53501 1 +     73687 ---T-
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 I 5
s Hippopotamus_amphibius.HipAmp_scaffold_1308              144491 1 +    277961 ---T-
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 I 4
s Hipposideros_armiger.JXIK01001085.1                      275911 1 -    477199 ---G-
i Hipposideros_armiger.JXIK01001085.1                   C 0 I 4
s Hipposideros_galeritus.HipGal_scaffold_104691              5067 1 -      9143 ---G-
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 I 4
s Hoolock_leuconedys.ctg649                                    98778 5 +    115816 TTTTT
i Hoolock_leuconedys.ctg649                                C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 13086 1 -     67322 ---T-
i Hyaena_hyaena.HyaHya_flattened_line_20729             I 6 I 5
s Hylobates_abbotti.k141_493872                              1915 5 +      5897 TTTTT
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_282275                               1128 5 +      1846 TTTTT
i Hylobates_agilis.k141_282275                          C 0 C 0
s Hylobates_klossii.k141_584463                               292 5 -      1009 ttttt
i Hylobates_klossii.k141_584463                         C 0 I 7
s Hylobates_muelleri.k141_1133650                            1350 5 -      2775 ttttt
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             29953 5 -     60944 ttttt
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     3134 1 +     22540 ---C-
i Hystrix_cristata.HysCri_scaffold_50788                C 0 I 2
s Indri_indri.k141_1884019                                    178 1 -      2196 ----t
i Indri_indri.k141_1884019                              N 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               6168 1 +     17520 ---T-
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 I 4
s Kogia_breviceps.KogBre_flattened_line_35920               21002 1 +     37189 ---T-
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 I 4
s Lagothrix_lagothricha.k141_12968                          46966 2 -    147782 ---TA
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lemur_catta.scaffold_1                                258404001 1 - 285822530 ----T
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        20899 1 +     39228 ----T
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            50273 1 +     63517 ----T
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        75495 1 +    116806 ----G
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     28536 1 -     33031 ----T
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3082787 1 -   3498232 ---t-
i Leptonychotes_weddellii.KB714749.1                    C 0 I 5
s Lepus_americanus.LepAme_scaffold_62849                     9994 1 +     22452 ---T-
i Lepus_americanus.LepAme_scaffold_62849                I 3 I 2
s Lipotes_vexillifer.KE558548.1                            133344 1 +   3060487 ---T-
i Lipotes_vexillifer.KE558548.1                         C 0 I 4
s Lophocebus_aterrimus.ctg55                             19244609 2 +  19376315 ---TT
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            7654 2 +     84689 ---CT
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3775405 2 +   6799190 ---CT
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20588262 1 -  62548349 ---t-
i Loxodonta_africana.GL010040.1                         C 0 I 5
s Lycaon_pictus.CM007556.1                               11084141 1 +  39895028 ---t-
i Lycaon_pictus.CM007556.1                              C 0 I 5
s Macaca_arctoides.k141_2201161                             16292 2 +     74745 ---TT
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12702798 2 +  12821369 ---TT
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               4894 2 +      6569 ---TT
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           43195 2 +     63263 ---TT
i Macaca_fascicularis.k141_155037                       C 0 I 1
s Macaca_fuscata.k119_1068107                               11771 2 +     12679 ---TT
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                1344 2 +      3017 ---TT
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  42956 2 -     79256 ---TT
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196031874 2 + 196197964 ---tt
i Macaca_mulatta.NC_041755.1                            C 0 I 1
s Macaca_nemestrina.KQ004885.1                           11441980 2 +  11645122 ---tt
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   1903 2 -     46448 ---TT
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                1733 2 -      3617 ---TT
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 12066 2 -     55006 ---TT
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43837103 2 +  43892939 ---TT
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                4326 2 -      5978 ---TT
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               1908 2 -     27140 ---TT
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43433769 2 -  43563597 ---TT
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4446595 2 -   4543643 ---TT
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            143401 1 +    252755 ---T-
i Manis_javanica.JSZB01003966.1                         C 0 I 4
s Manis_pentadactyla.KN017078.1                             33468 1 +     58827 ---T-
i Manis_pentadactyla.KN017078.1                         C 0 I 5
s Megaderma_lyra.MegLyr_scaffold_3562                       61675 1 -    234502 ---T-
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 I 4
s Mellivora_capensis.MelCap_flattened_line_1828            226043 1 -    226874 ---C-
i Mellivora_capensis.MelCap_flattened_line_1828         C 0 I 5
s Meriones_unguiculatus.MerUng_scaffold_52233                8613 1 +     15977 ---T-
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 I 6
s Mesoplodon_bidens.MesBid_scaffold_183284                   1040 1 +      2166 ---T-
i Mesoplodon_bidens.MesBid_scaffold_183284              C 0 I 4
s Microcebus_murinus.CM007691.1                          16507118 1 +  47401472 ----t
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  28445 1 -     48017 ---T-
i Microgale_talazaci.MicTal_scaffold_34660              C 0 I 3
s Micronycteris_hirsuta.MicHir_scaffold_37978               20079 1 -     32043 ---T-
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 I 4
s Microtus_ochrogaster.CM001673.1                        22816305 1 -  98408828 ---T-
i Microtus_ochrogaster.CM001673.1                       C 0 I 6
s Miniopterus_natalensis.LDJU01000022.1                   8206806 1 +  10048721 ---T-
i Miniopterus_natalensis.LDJU01000022.1                 C 0 I 11
s Miniopterus_schreibersii.MinSch_scaffold_24116            31487 1 +     45743 ---T-
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 I 2
s Miopithecus_ogouensis.k141_2666161                        32424 2 +     34273 ---TT
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         8085 1 -    104932 ---T-
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 I 5
s Mirza_zaza.k141_226143                                     2531 1 +      8497 ----T
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 143767 1 +    154973 ---T-
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 I 4
s Mormoops_blainvillei.MorMeg_scaffold_2952                158616 1 +    265003 ---T-
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 I 4
s Moschus_moschiferus.MosMos_scaffold_146101                 2010 1 -      4346 ---T-
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 I 4
s Mungos_mungo.MunMun_flattened_line_8729                  141708 1 -    168139 ---T-
i Mungos_mungo.MunMun_flattened_line_8729               C 0 I 5
s Muscardinus_avellanarius.MusAve_scaffold_9643              8137 1 +     98495 ---T-
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 1 I 2
s Mustela_putorius.JH417978.1                             4420930 1 -  28371801 ---C-
i Mustela_putorius.JH417978.1                           C 0 I 5
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             2473 1 -      8794 ---T-
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 I 10
s Nannospalax_galili.KL204535.1                           2056859 1 +   2354432 ---T-
i Nannospalax_galili.KL204535.1                         C 0 I 20
s Nasalis_larvatus.k141_153429                               4805 2 +     48152 ---TT
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4481686 1 -  14209539 ---t-
i Neomonachus_schauinslandi.NINY01007774.1              C 0 I 5
s Neophocaena_asiaeorientalis.KZ688543.1                  3948376 1 -   4490290 ---T-
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 I 4
s Noctilio_leporinus.NocLep_scaffold_12062                  46733 1 +     94413 ---T-
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 I 4
s Nomascus_annamensis.k141_1223136                          10584 5 -     11253 TTTTT
i Nomascus_annamensis.k141_1223136                      C 0 C 0
s Nomascus_concolor.k141_468488                              1227 5 -      1482 TTTTT
i Nomascus_concolor.k141_468488                         C 0 C 0
s Nomascus_gabriellae.k141_906566                            1216 5 -      2544 TTTTT
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             21690 5 -  18771707 ttttt
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_844529                                   964 5 +      2124 TTTTT
i Nomascus_siki_a.k141_844529                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                27136 1 +   3668941 ---t-
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 I 5
s Nycticebus_bengalensis.LG16                            65563984 2 -  95554990 ---CT
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                             829 2 +      6470 ---CT
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65666353 2 +  89412551 ---CT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4992672 1 -  23139505 ---T-
i Ochotona_princeps.JH802095.1                          C 0 I 2
s Odobenus_rosmarus.KB229369.1                             676344 1 -   3126709 ---T-
i Odobenus_rosmarus.KB229369.1                          C 0 I 5
s Odocoileus_virginianus.KZ101650.1                       1077133 1 +   1425656 ---T-
i Odocoileus_virginianus.KZ101650.1                     C 0 I 4
s Okapia_johnstoni.LVCL01S0017931.1                         34297 1 +     78940 ---T-
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 I 4
s Ondatra_zibethicus.OndZib_scaffold_6821                  121638 1 +    145789 ---T-
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 I 6
s Onychomys_torridus.OnyTor_scaffold_12578                  33578 1 +     62360 ---T-
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 I 6
s Orcinus_orca.KB316965.1                                 7222060 1 -   7562323 ---T-
i Orcinus_orca.KB316965.1                               C 0 I 4
s Orycteropus_afer.OryAfe_flattened_line_13509              40522 1 -     66828 ---T-
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 I 3
s Oryctolagus_cuniculus.CM000803.1                      141872643 1 + 163896628 ---t-
i Oryctolagus_cuniculus.CM000803.1                      I 3 I 2
s Otocyon_megalotis.JAEUCK010005121.1                      304472 1 -    505867 ---t-
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 I 5
s Otolemur_crassicaudatus.k141_321880                       35992 2 +     38679 ---TT
i Otolemur_crassicaudatus.k141_321880                   I 1 C 0
s Otolemur_garnettii.GL873528.1                          18005433 2 -  38779656 ---tt
i Otolemur_garnettii.GL873528.1                         I 1 C 0
s Ovis_aries.CM001582.2                                 134074713 1 - 275406953 ---T-
i Ovis_aries.CM001582.2                                 C 0 I 4
s Ovis_canadensis.OviCan_scaffold_6251                      75927 1 +    140051 ---T-
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 I 4
s Pan_paniscus.CM003386.1                               127571453 5 - 205426864 ttttt
i Pan_paniscus.CM003386.1                               I 2 C 0
s Pan_troglodytes.CM009241.2                            120148606 5 - 196562556 ttttt
i Pan_troglodytes.CM009241.2                            I 8 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  30933 1 +    295523 ---T-
i Panthera_onca.PanOnc_flattened_line_1615              C 0 I 5
s Panthera_pardus.KV860323.1                              3634536 1 +  18214204 ---T-
i Panthera_pardus.KV860323.1                            C 0 I 5
s Panthera_tigris.KE721879.1                              5024314 1 -   6340057 ---t-
i Panthera_tigris.KE721879.1                            C 0 I 5
s Pantholops_hodgsonii.KE114631.1                         1063571 1 -   1292953 ---T-
i Pantholops_hodgsonii.KE114631.1                       C 0 I 4
s Papio_anubis.CM001492.2                               188152553 2 - 188283584 ---tt
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            48765 2 +     76494 ---TT
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47509950 2 +  47705337 ---TT
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 63932 2 -    104429 ---TT
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  13718 2 -     29451 ---TT
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                34121 2 +     35859 ---TT
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    112496 1 -    135482 ---T-
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 I 5
s Perodicticus_ibeanus.k141_117958                           2047 1 -     23713 ----T
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            21344 1 -     27972 ----T
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      39946 1 -     45160 ---C-
i Perognathus_longimembris.PerPac_flattened_line_22291  I 1 I 2
s Peromyscus_maniculatus.KI615518.1                       4946752 1 -   8017169 ---T-
i Peromyscus_maniculatus.KI615518.1                     C 0 I 5
s Phocoena_phocoena.PhoPho_flattened_line_11948            118677 1 -    122454 ---T-
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 I 4
s Piliocolobus_badius.k141_1497351                           1806 2 -      3310 ---TT
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       21712 2 -     82327 ---TT
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           18464 2 +     19957 ---TT
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26736473 2 +  26888534 ---tt
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pithecia_albicans.k141_991845                             40460 2 -     61926 ---TA
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        21889 2 +     78826 ---TA
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              5840 2 -     15800 ---TA
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                         9038 2 -     16101 ---TA
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          2347 2 +      9673 ---TA
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13471341 2 -  19735023 ---TA
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           10249 2 -     31692 ---TA
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           2744 1 +     21690 ---T-
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 I 4
s Plecturocebus_bernhardi.k141_959214                       19656 2 +     44506 ---TA
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        19866 2 +     67491 ---TA
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      10111 2 -     98129 ---TA
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     19712 2 +    147771 ---TA
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        19962 2 -     23762 ---TA
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                           428 2 -     55515 ---TA
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         19781 2 +    152463 ---TA
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      6541 2 +      8943 ---TA
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                          9501 2 +    134592 ---TA
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          20091 2 -     75465 ---TA
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              184001 3 -    373494 --ttt
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19803906 5 +  19899266 TTTTT
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               2043 2 -     15069 ---TT
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              2177 2 +     14865 ---TT
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                73365 1 +     78963 ---T-
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 I 5
s Prolemur_simus.MPIZ01000048.1                           6845375 1 +  12164890 ----t
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     13843 1 -     30946 ----t
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                          526 1 +     11805 ----T
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           39857 1 +     52369 ----T
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         32245 1 -     44753 ----T
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            14167 1 +     27322 ----T
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       13809 1 -     53241 ----T
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         36081 1 -     48185 ----T
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           30142 1 +     77221 ---T-
i Psammomys_obesus.NESX01026517.1                       C 0 I 5
s Pteronotus_parnellii.KE867983.1                            1283 1 -     27784 ---t-
i Pteronotus_parnellii.KE867983.1                       C 0 I 4
s Pteronura_brasiliensis.PteBra_flattened_line_1343        242810 1 -    344369 ---C-
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 I 5
s Pteropus_alecto.KB031157.1                             13243403 1 -  17261082 ---T-
i Pteropus_alecto.KB031157.1                            C 0 I 4
s Pteropus_vampyrus.KN525959.1                             601356 1 -   3946241 ---T-
i Pteropus_vampyrus.KN525959.1                          C 0 I 4
s Puma_concolor.QAVW01000427.1                          131531126 1 - 161321710 ---T-
i Puma_concolor.QAVW01000427.1                          C 0 I 5
s Pygathrix_cinerea.k141_374971                             26168 2 +     56732 ---TT
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6802657 2 +   6970761 ---TT
i Pygathrix_nigripes_b.ctg79                               C 0 I 2
s Pygathrix_nigripes_a.k141_101123                             2049 2 +     18040 ---TT
i Pygathrix_nigripes_a.k141_101123                        C 0 I 3
s Rangifer_tarandus.RanTarSib_scaffold_24239                13219 1 +     68503 ---T-
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 I 4
s Rattus_norvegicus.chr11                                13912185 1 +  90463843 ---T-
i Rattus_norvegicus.chr11                               C 0 I 6
s Rhinolophus_sinicus.LVEH01000179.1                      1784998 1 +   2252614 ---T-
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 I 4
s Rhinopithecus_bieti.k119_102124                           12605 2 -     14454 ---TT
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206373931 2 - 206558726 ---tt
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44851579 2 -  45163003 ---TT
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                16705 1 +    109198 ---T-
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 I 4
s Saiga_tatarica.SaiTat_scaffold_82192                       5001 1 +     12214 ---T-
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 I 4
s Saimiri_boliviensis.NW_024100938.1                     15669549 2 -  43202129 ---TA
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        1415 2 +     34089 ---TA
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              1358 2 -     60842 ---TA
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              1435 2 +     67014 ---TA
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              1431 2 +     60816 ---TA
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 1368 2 -     76454 ---TA
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17337891 2 -  30362882 ---TA
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         17491 2 -     62485 ---TA
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   28759 1 -    114521 ---T-
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 I 5
s Semnopithecus_entellus.k141_1527475                       24592 2 +     26421 ---TT
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       5053 2 +     20762 ---TT
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         38787 2 +     40653 ---TT
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                            9345 2 -     12194 ---TT
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     22767 2 -     27512 ---TT
i Semnopithecus_schistaceus.k141_653647                 I 2 C 0
s Semnopithecus_vetulus.k141_642050                         31786 2 -     33692 ---TT
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   96366 1 -    120886 ---T-
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 I 5
s Solenodon_paradoxus.SolPar_flattened_line_1012            15271 1 +    739146 ---T-
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 I 5
s Sorex_araneus.JH798170.1                               17747650 1 -  27805282 ---T-
i Sorex_araneus.JH798170.1                              C 0 I 5
s Spilogale_gracilis.SpiGra_flattened_line_905             231807 1 -    276980 ---C-
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 I 5
s Suricata_suricatta.SurSur_flattened_line_20339            24377 1 +     62062 ---T-
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 I 5
s Sus_scrofa.CM000824.4                                 189269282 1 + 218635234 ---T-
i Sus_scrofa.CM000824.4                                 C 0 I 4
s Symphalangus_syndactylus.tarseq_24                     13898749 5 +  13920577 TTTTT
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               3223 1 -      6213 ---T-
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 I 3
s Tamandua_tetradactyla.TamTet_scaffold_26877               12147 1 +     45698 ---T-
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 I 11
s Tapirus_indicus.TapInd_scaffold_176                      804154 1 +   1148477 ---T-
i Tapirus_indicus.TapInd_scaffold_176                   C 0 I 10
s Tapirus_terrestris.TapTer_scaffold_14939                  54814 1 +     99546 ---T-
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 I 10
s Tarsius_lariang.k141_609102                               23485 1 +     42269 ---T-
i Tarsius_lariang.k141_609102                           I 5 C 0
s Tarsius_wallacei.k141_48636                               56799 2 +     65473 ---TT
i Tarsius_wallacei.k141_48636                           I 5 C 0
s Theropithecus_gelada.CM009951.1                       194004089 2 - 194193292 ---tt
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                   999 1 +      6782 ---T-
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 I 4
s Tonatia_saurophila.TonSau_scaffold_3334                  133289 1 -    259118 ---T-
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 I 4
s Trachypithecus_auratus.k141_738098                        23163 2 +     38948 ---TT
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   16890 2 -     32910 ---TT
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       22788 2 +     24652 ---TT
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      1666 2 -      3559 ---TC
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           39612 2 -     54611 ---TT
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       15611 2 +     17312 ---TT
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    22974 2 -     25040 ---TC
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          1640 2 +      3528 ---TC
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  48002 2 +     51589 ---TC
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       11177 2 +     14732 ---TT
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       1655 2 -     28054 ---TT
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44656450 2 -  44834318 ---TT
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        1460 2 +      3372 ---TT
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   2634 1 +     90398 ---T-
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 I 4
s Trichechus_manatus.JH594618.1                          16078741 1 +  31416278 ---T-
i Trichechus_manatus.JH594618.1                         I 1 I 5
s Tupaia_chinensis.KB320831.1                             2788589 1 -   3938065 ---t-
i Tupaia_chinensis.KB320831.1                           C 0 I 2
s Tupaia_tana.TupTan_flattened_line_68454                    1127 1 +     13056 ---A-
i Tupaia_tana.TupTan_flattened_line_68454               C 0 I 2
s Tursiops_truncatus.MRVK01000923.1                      69310778 1 -  96451834 ---T-
i Tursiops_truncatus.MRVK01000923.1                     C 0 I 4
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 23954 1 -     25548 ---T-
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 I 5
s Ursus_maritimus.KK498671.1                              6511394 1 +  28682327 ---T-
i Ursus_maritimus.KK498671.1                            C 0 I 5
s Varecia_rubra.k141_432109                                  2220 1 -     20643 ----t
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             21766 1 -     33872 ----t
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1522087 1 -   2331223 ---t-
i Vicugna_pacos.KN269600.1                              C 0 I 4
s Vulpes_lagopus.VulLag_flattened_line_2045                134542 1 -    281493 ---T-
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 I 5
s Zalophus_californianus.ZalCal_flattened_line_4097        211069 1 -    227762 ---T-
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 I 5
s Ziphius_cavirostris.ZipCav_flattened_line_127025           4281 1 -      8775 ---T-
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 I 4
e Aplodontia_rufa.AprRuf_scaffold_156013                      909 0 +      5067 C
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            93631 8 +    112873 I
e Myotis_myotis.MyoMyo_scaffold_6123                         7641 0 +     66751 C
e Myotis_lucifugus.GL429887.1                             3462452 0 -   3747815 C
e Myotis_davidii.KB114863.1                               5016535 6 +   6462685 I
e Myotis_brandtii.KE161952.1                               964866 0 +   8389877 C
e Murina_feae.MurFea_scaffold_2254                          16540 0 -    100666 C
e Lasiurus_borealis.LasBor_scaffold_5102                   111019 7 -    115756 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16291 1 -    119109 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     12283 2 -     20485 I
e Jaculus_jaculus.JH725517.1                              8561873 2 +  11848649 I
e Allactaga_bullata.AllBul_scaffold_70162                    8911 2 -     22067 I
e Xerus_inauris.XerIna_scaffold_7898                       124051 0 -    134049 C
e Spermophilus_dauricus.KZ294190.1                        2236948 0 +   2842873 C
e Octodon_degus.JH651621.1                                3678743 1836 +  10294119 I
e Myocastor_coypus.MyoCoy_scaffold_3653                     87101 0 -    117718 C
e Mus_spretus.CM004110.1                                 74327278 6 +  97876770 I
e Mus_pahari.LT608305.1                                  67552266 6 +  89017189 I
e Mus_musculus.chr16                                     75486102 6 +  98207768 I
e Mus_caroli.LT608236.1                                  70763028 6 +  92629107 I
e Mesocricetus_auratus.KB708139.1                         1043418 6 -  26018355 I
e Marmota_marmota.CZRN01000005.1                         36870872 0 +  64221397 C
e Ictidomys_tridecemlineatus.JH393315.1                   7123028 0 +  13083262 C
e Heterocephalus_glaber.JH602058.1                        2548028 229 +  31725842 I
e Fukomys_damarensis.KN123630.1                          13889876 0 -  19261668 C
e Eulemur_sanfordi.k141_186399                              12739 1 -     29447 I
e Eulemur_rufus.k141_1620292                                30016 1 +     46535 I
e Eulemur_mongoz.k141_825972                                12827 1 +     27497 I
e Eulemur_macaco.k141_1341545                               12550 1 +     16540 I
e Eulemur_fulvus.k141_653297                                 8176 1 +    109717 I
e Eulemur_flavifrons.k141_903901                             4688 1 +     60246 I
e Eulemur_coronatus.k141_3240342                             8372 1 +     36558 I
e Eulemur_collaris.k141_311830                               1900 0 -      6809 C
e Eulemur_albifrons.k141_715837                              1964 1 +     13586 I
e Dolichotis_patagonum.DolPat_scaffold_14102                33375 0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             56104 16 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                14631 16 +     26546 I
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 27476 0 -     67205 C
e Cavia_tschudii.CavTsc_scaffold_488                       173989 0 +    436027 C
e Cavia_porcellus.DS562889.1                             15795798 0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15783848 16 -  24422027 I
e Capromys_pilorides.CapPil_scaffold_647363                  1402 3 +      1887 I

a score=0.000000
s hg38.chr4_GL000008v2_random                                8717  4 +    209709 T---------T---------T------T
s Allenopithecus_nigroviridis.k141_3103707                  59727  8 +     61638 T---------T---------TTT--CCT
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        51535  8 +     53391 T---------T---------TTT--CCT
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         2259  8 +     72529 T---------T---------TTT--CCT
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          1835  8 +      3797 T---------T---------TTT--CCT
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             7014  7 -     18050 T---------T---------TTTT---T
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  8130  7 -     11521 T---------T---------TTTT---T
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              7691  7 -     21359 T---------T---------TTTT---T
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1856473                                6073  7 +      7227 T---------T---------TTTT---T
i Alouatta_juara.k141_1856473                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          6987  7 -     10438 T---------T---------TTTT---T
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            3642  7 +      7047 T---------T---------TTTT---T
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             6929  7 +     10410 T---------T---------TTTT---T
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                             727  7 -      4927 T---------T---------TTTT---T
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             3660  7 +      6429 T---------T---------TTTT---T
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Aotus_azarae.k141_3170768                                 59374  7 +     78111 T---------T---------TTT--C-T
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            2304  7 +     22701 T---------T---------TTT--C-T
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5746262  7 +   9889416 t---------t---------t---ttct
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             2843  7 -    104377 T---------T---------TTT--C-T
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               2852  7 +     23246 T---------T---------TTT--C-T
i Aotus_vociferans.k141_718647                          C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      14852  5 +     17483 T---------T-------TTT-------
i Arctocebus_calabarensis.k141_1161114                  C 0 I 3
s Ateles_geoffroyi_b.tarseq_2582                             9536115  7 +  39197703 T---------T---------TTTT---T
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             57399  7 +     85812 T---------T---------TTTT---T
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 8398  7 +     89302 T---------T---------TTTT---T
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             12908  7 -     58268 T---------T---------TTTT---T
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             60894  7 +    119057 T---------T---------TTTT---T
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               2845  7 -     25888 T---------T---------TTTT---T
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 3598  1 -     16375 T---------------------------
i Avahi_laniger.k141_2840928                            C 0 I 8
s Avahi_peyrierasi.k141_767228                               9547  1 -      9688 T---------------------------
i Avahi_peyrierasi.k141_767228                          C 0 N 0
s Cacajao_ayresi.k141_724503                               110749  7 -    171031 T---------T---------TT---CTT
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                  9775  7 +    125063 T---------T---------TT---CTT
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                11823  7 -    216513 T---------T---------TT---CTT
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        4363  7 -    134917 T---------T---------TT---CTT
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Carlito_syrichta.NW_007248099.1                          306004  9 +    345090 t---------ttt-------t---tttg
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Cebus_albifrons.Contig22                               18887590  7 -  29618158 T---------T---------TTTT---T
i Cebus_albifrons.Contig22                              I 1 C 0
s Cebus_olivaceus.k141_93739                                 5134  7 -     26817 T---------T---------TTTT---T
i Cebus_olivaceus.k141_93739                            I 1 C 0
s Cebus_unicolor.k141_239009                                 9377  7 +     25043 T---------T---------TTTT---T
i Cebus_unicolor.k141_239009                            I 1 C 0
s Cephalopachus_bancanus.k141_702587                         5045  9 +     21754 T---------T-------TTTGT--C-A
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6551523  8 +   6739814 t---------t---------t--ttcct
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      53000  8 -     54931 T---------T---------TTT--CCT
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         17984  8 -     19697 T---------T---------TTT--CCT
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         55515  8 -    107033 T---------T---------TTT--CCT
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        1956  8 -      3853 T---------T---------TTT--CCT
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          25889  8 +     30494 T---------T---------TTT--CCT
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           1913  8 -      4022 T---------T---------TTT--CCT
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          1806  8 -      3505 T---------C---------TTT--CCT
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           20610  8 +     35983 T---------C---------TTT--CCT
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11987132  8 +  12117833 T---------T---------TTT--CCT
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46473885  8 +  46592721 T---------C---------TTT--CCT
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      31712  8 +     33420 T---------C---------TTT--CCT
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        1748  8 -      3443 T---------T---------TTT--CCT
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      2739  8 -      4669 T---------T---------TTT--CCT
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        2539  8 -      4411 T---------C---------TTT--CCT
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         2064  8 -      4205 T---------T---------TTT--CCT
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           55905  6 -     68416 T---------T------TTTT-------
i Cheirogaleus_major.k141_1157592                       C 0 I 3
s Cheirogaleus_medius.k141_133808                            4950  6 +     13308 T---------T------TTTT-------
i Cheirogaleus_medius.k141_133808                       C 0 I 3
s Cheracebus_lucifer.k141_619653                             2392  7 -     18223 T---------A---------TTTT---T
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             19415  7 +     25473 T---------A---------TTTT---T
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           38454  7 +     57117 T---------A---------TTTT---T
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          43129  7 +     54541 T---------A---------TTTT---T
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chiropotes_israelita.k141_1189915                         67970  7 +    196370 T---------T---------TT---CTT
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          12151  7 +     40510 T---------T---------TT---CTT
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15135345  8 -  15256731 T---------T---------TTT--CCT
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      30391  8 -     53260 T---------T---------TTT--CCT
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101140840  8 + 101219884 t---------t---------t--ttcct
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10879419  8 +  10971483 t---------t---------t--ttcct
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147660577  8 + 156195979 T---------T---------TTT--CCT
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            12563  9 +     23629 T---------T--------TTTT--CCT
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16841774  5 +  31942871 T---------T-------TTT-------
i Daubentonia_madagascariensis.ctg11                    C 0 I 3
s Erythrocebus_patas.Contig8                             48767524  8 -  48907691 T---------T---------TTT--CCT
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eulemur_albifrons.k141_715837                              1965  6 +     13586 T---------T------TTTT-------
i Eulemur_albifrons.k141_715837                         I 1 I 4
s Eulemur_collaris.k141_311830                               1900  5 -      6809 ----------T------TTTT-------
i Eulemur_collaris.k141_311830                          C 0 I 4
s Eulemur_coronatus.k141_3240342                             8373  6 +     36558 T---------T------TTTT-------
i Eulemur_coronatus.k141_3240342                        I 1 I 3
s Eulemur_flavifrons.k141_903901                             4689  6 +     60246 T---------T------TTTT-------
i Eulemur_flavifrons.k141_903901                        I 1 I 3
s Eulemur_fulvus.k141_653297                                 8177  6 +    109717 T---------T------TTTT-------
i Eulemur_fulvus.k141_653297                            I 1 I 4
s Eulemur_macaco.k141_1341545                               12551  6 +     16540 T---------T------TTTT-------
i Eulemur_macaco.k141_1341545                           I 1 I 3
s Eulemur_mongoz.k141_825972                                12828  6 +     27497 T---------T------TTTT-------
i Eulemur_mongoz.k141_825972                            I 1 I 3
s Eulemur_rubriventer.k141_411740                           15290  6 +     26808 T---------T------TTTT-------
i Eulemur_rubriventer.k141_411740                       C 0 I 3
s Eulemur_rufus.k141_1620292                                30017  6 +     46535 T---------T------TTTT-------
i Eulemur_rufus.k141_1620292                            I 1 I 4
s Eulemur_sanfordi.k141_186399                              12740  6 -     29447 T---------T------TTTT-------
i Eulemur_sanfordi.k141_186399                          I 1 I 4
s Galago_moholi.ctg555                                     207925  5 -    847004 T---------T-------TAT-------
i Galago_moholi.ctg555                                  C 0 I 3
s Galago_senegalensis.k141_964197                           10305  5 -     43889 T---------T-------TAT-------
i Galago_senegalensis.k141_964197                       C 0 I 3
s Galagoides_demidoff.k141_1769638                           7354  5 +     27357 T---------T-------TTT-------
i Galagoides_demidoff.k141_1769638                      C 0 I 3
s Galeopterus_variegatus.GalVar_scaffold_354               153222  9 +    324696 T-----TTTTT-------TTT-------
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 I 3
s Gorilla_beringei.k141_111300                               2115  7 -     14630 T---------T---------TTTT---T
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119649214  7 - 195582420 t---------t---------t---tttt
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                         2516  8 +      3980 T---GTTTGTT-----------------
i Hapalemur_alaotrensis.k141_1198205                    C 0 I 9
s Hapalemur_gilberti.k141_97962                             24996  7 +     26611 T--------GT------TTTT-------
i Hapalemur_gilberti.k141_97962                         C 0 I 6
s Hapalemur_occidentalis.k141_797938                        42330  1 -     54384 --------------------t-------
i Hapalemur_occidentalis.k141_797938                    I 10 I 6
s Hapalemur_griseus.k141_1387522                             2450  8 +     56096 T---GTTTGTT-----------------
i Hapalemur_griseus.k141_1387522                        C 0 I 9
s Hapalemur_meridionalis.k141_186231                        25723  8 -     42470 tg-tttgt--t-----------------
i Hapalemur_meridionalis.k141_186231                    C 0 I 9
s Hoolock_leuconedys.ctg649                                    98783  7 +    115816 C---------T---------TTTT---T
i Hoolock_leuconedys.ctg649                                C 0 I 62
s Hylobates_abbotti.k141_493872                              1920  7 +      5897 C---------T---------TTTT---T
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_282275                               1133  7 +      1846 C---------T---------TTTT---T
i Hylobates_agilis.k141_282275                          C 0 C 0
s Hylobates_klossii.k141_466549                              8377  7 +     11537 C---------T---------TTTT---T
i Hylobates_klossii.k141_466549                         I 115 I 64
s Hylobates_pileatus_b.ContigUN                                 14621472  1 -  25970782 ---------------------------T
i Hylobates_pileatus_b.ContigUN                                N 0 C 0
s Hylobates_muelleri.k141_1133650                            1355  7 -      2775 c---------t---------t---tttt
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             29958  7 -     60944 c---------t---------t---tttt
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Indri_indri.k141_1884019                                    179 12 -      2196 t---------ttttttttttt-------
i Indri_indri.k141_1884019                              C 0 I 4
s Lagothrix_lagothricha.k141_12968                          46968  7 -    147782 T---------T---------TTTT---T
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lemur_catta.scaffold_1                                258404002 12 - 285822530 T---GTTTGTT------TTTT-------
i Lemur_catta.scaffold_1                                C 0 I 3
s Lepilemur_ankaranensis.k141_884009                        20900  2 +     39228 T---------T-----------------
i Lepilemur_ankaranensis.k141_884009                    C 0 I 6
s Lepilemur_dorsalis.k141_134267                            50274  2 +     63517 T---------T-----------------
i Lepilemur_dorsalis.k141_134267                        C 0 I 6
s Lepilemur_ruficaudatus.k141_617879                        75496  6 +    116806 T---------T------TTTA-------
i Lepilemur_ruficaudatus.k141_617879                    C 0 I 3
s Lepilemur_septentrionalis.k141_578524                     28537  2 -     33031 T---------T-----------------
i Lepilemur_septentrionalis.k141_578524                 C 0 I 6
s Lophocebus_aterrimus.ctg55                             19244611  8 +  19376315 T---------T---------TTT--CCT
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            7656  5 +     84689 T---------T-------TTT-------
i Loris_lydekkerianus.k141_550999                       C 0 I 3
s Loris_tardigradus.ctg97                                 3775407  5 +   6799190 T---------T-------TTT-------
i Loris_tardigradus.ctg97                               C 0 I 3
s Macaca_arctoides.k141_2201161                             16294  8 +     74745 ----------T---------GTTT-CCT
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12702800  8 +  12821369 T---------G---------TTT--CCT
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               4896  8 +      6569 T---------T---------TTT--CCT
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           43198  8 +     63263 T---------T---------TTT--CCT
i Macaca_fascicularis.k141_155037                       I 1 C 0
s Macaca_fuscata.k119_1068107                               11773  9 +     12679 T---------T--------TTTT--CCT
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                1346  9 +      3017 T---------T--------TTTT--CCT
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  42958  9 -     79256 T---------T--------TTTT--CCT
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196031877  8 + 196197964 t---------t---------t--ttcct
i Macaca_mulatta.NC_041755.1                            I 1 C 0
s Macaca_nemestrina.KQ004885.1                           11441982  9 +  11645122 t---------tt--------t--ttcct
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   1905  9 -     46448 T---------T--------TTTT--CCT
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                1735 10 -      3617 T---------T---------TTTTTCCT
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 12068  9 -     55006 T---------T--------TTTT--CCT
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43837105  9 +  43892939 T---------T--------TTTT--CCT
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                4328  8 -      5978 T---------G---------TTT--CCT
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               1910  9 -     27140 T---------T--------TTTT--CCT
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43433771  8 -  43563597 T---------T---------TTT--CCT
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4446597  8 -   4543643 T---------T---------TTT--CCT
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Microcebus_murinus.CM007691.1                          16507119 15 +  47401472 tgcttttttttttt------t-------
i Microcebus_murinus.CM007691.1                         C 0 I 2
s Miopithecus_ogouensis.k141_2666161                        32426  8 +     34273 T---------T---------TTT--CCT
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirza_zaza.k141_226143                                     2532  6 +      8497 T---------T------TTTT-------
i Mirza_zaza.k141_226143                                C 0 I 2
s Nasalis_larvatus.k141_153429                               4807  9 +     48152 T---------T---------TTTT-CTT
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Nomascus_annamensis.k141_1223136                          10589  7 -     11253 C---------T---------TTTT---T
i Nomascus_annamensis.k141_1223136                      C 0 C 0
s Nomascus_concolor.k141_468488                              1232  7 -      1482 C---------T---------TTTT---T
i Nomascus_concolor.k141_468488                         C 0 C 0
s Nomascus_gabriellae.k141_906566                            1221  7 -      2544 C---------T---------TTTT---T
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             21695  7 -  18771707 c---------t---------t---tttt
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_844529                                   969  7 +      2124 C---------T---------TTTT---T
i Nomascus_siki_a.k141_844529                             C 0 C 0
s Nycticebus_bengalensis.LG16                            65563986  5 -  95554990 T---------T-------TTT-------
i Nycticebus_bengalensis.LG16                           C 0 I 3
s Nycticebus_coucang.k141_2051882                             831  5 +      6470 T---------T-------TTT-------
i Nycticebus_coucang.k141_2051882                       C 0 I 3
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65666355  5 +  89412551 T---------T-------TTT-------
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 I 3
s Otolemur_crassicaudatus.k141_321880                       35994  5 +     38679 T---------T-------TTT-------
i Otolemur_crassicaudatus.k141_321880                   C 0 I 3
s Otolemur_garnettii.GL873528.1                          18005435  5 -  38779656 t---------ttt-------t-------
i Otolemur_garnettii.GL873528.1                         C 0 I 3
s Pan_paniscus.CM003386.1                               127571458  7 - 205426864 t---------t---------t---tttt
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120148611  7 - 196562556 t---------t---------t---tttt
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Papio_anubis.CM001492.2                               188152555  8 - 188283584 t---------t---------t--ttcct
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            48767  8 +     76494 T---------T---------TTT--CCT
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47509952  8 +  47705337 T---------T---------TTT--CCT
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 63934  8 -    104429 T---------T---------TTT--CCT
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  13720  8 -     29451 T---------T---------TTT--CCT
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                34123  8 +     35859 T---------T---------TTT--CCT
i Papio_ursinus.k141_3762866                            C 0 C 0
s Perodicticus_ibeanus.k141_117958                           2048  5 -     23713 T---------T-------TTT-------
i Perodicticus_ibeanus.k141_117958                      C 0 I 3
s Perodicticus_potto.k141_713187                            21345  5 -     27972 T---------T-------TTT-------
i Perodicticus_potto.k141_713187                        C 0 I 4
s Piliocolobus_badius.k141_1497351                           1808  8 -      3310 T---------T---------TTT--CCT
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       21714  8 -     82327 T---------T---------TTT--CCT
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           18466  8 +     19957 T---------T---------TTT--CCT
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26736475  8 +  26888534 t---------t---------t--ttcct
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pithecia_albicans.k141_991845                             40462  7 -     61926 T---------T---------TTAT---T
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        21891  7 +     78826 T---------T---------TTAT---T
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              5842  7 -     15800 T---------T---------TTAT---T
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                         9040  7 -     16101 T---------T---------TTAT---T
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          2349  7 +      9673 T---------T---------TTAT---T
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13471343  7 -  19735023 T---------T---------TTAT---T
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           10251  7 -     31692 T---------T---------TTAT---T
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       19658  7 +     44506 T---------T---------TTTT---T
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        19868  7 +     67491 T---------T---------TTTT---T
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      10113  7 -     98129 T---------T---------TTTT---T
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     19714  7 +    147771 T---------T---------TTTT---T
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        19964  7 -     23762 T---------T---------TTTT---T
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                           430  7 -     55515 T---------T---------TTTT---T
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         19783  7 +    152463 T---------T---------TTTT---T
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      6543  7 +      8943 T---------T---------TTTT---T
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                          9503  7 +    134592 T---------T---------TTTT---T
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          20093  7 -     75465 T---------T---------TTTT---T
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              184004  7 -    373494 t---------t---------t---tttt
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19803911  7 +  19899266 T---------T---------TTTT---T
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               2045  9 -     15069 T---------T---------TTTT-CTT
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              2179  9 +     14865 T---------T---------TTTT-CTT
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6845376 12 +  12164890 tg-tttgt--tttt------t-------
i Prolemur_simus.MPIZ01000048.1                         C 0 I 6
s Propithecus_coquerelli.NW_012147863.1                     13844  1 -     30946 ----------t-----------------
i Propithecus_coquerelli.NW_012147863.1                 C 0 I 8
s Propithecus_coronatus.k141_1353159                          527  1 +     11805 ----------T-----------------
i Propithecus_coronatus.k141_1353159                    C 0 I 8
s Propithecus_diadema.k141_577245                           39858  1 +     52369 ----------T-----------------
i Propithecus_diadema.k141_577245                       C 0 I 8
s Propithecus_edwardsi.k141_1317105                         32246  1 -     44753 ----------T-----------------
i Propithecus_edwardsi.k141_1317105                     C 0 I 8
s Propithecus_perrieri.k141_7554                            14168  1 +     27322 ----------T-----------------
i Propithecus_perrieri.k141_7554                        C 0 I 8
s Propithecus_tattersalli.k141_907138                       13810  1 -     53241 ----------T-----------------
i Propithecus_tattersalli.k141_907138                   C 0 I 8
s Propithecus_verreauxi.k141_158021                         36082  1 -     48185 ----------T-----------------
i Propithecus_verreauxi.k141_158021                     C 0 I 8
s Pygathrix_cinerea.k141_374971                             26170  9 +     56732 T---------T---------TTTT-CTT
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6802661  9 +   6970761 T---------T---------TTTT-CTT
i Pygathrix_nigripes_b.ctg79                               I 2 C 0
s Pygathrix_nigripes_a.k141_101123                             2054  9 +     18040 T---------T---------TTTT-CTT
i Pygathrix_nigripes_a.k141_101123                        I 3 C 0
s Rhinopithecus_bieti.k119_102124                           12607  9 -     14454 T---------T---------TTTT-CTT
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206373933  9 - 206558726 t---------t---------t-tttctt
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44851581  9 -  45163003 T---------T---------TTTT-CTT
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15669551  6 -  43202129 T---------T---------TTT----T
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        1417  6 +     34089 T---------T---------TTT----T
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              1360  6 -     60842 T---------T---------TTT----T
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              1437  6 +     67014 T---------T---------TTT----T
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              1433  6 +     60816 T---------T---------TTT----T
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 1370  6 -     76454 T---------T---------TTT----T
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17337893  7 -  30362882 A---------T---------TTT--C-T
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         17493  7 -     62485 A---------T---------TTT--C-T
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Semnopithecus_entellus.k141_1527475                       24594 10 +     26421 T--------TT---------TTTT-CTT
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       5055  9 +     20762 T---------T---------TTTT-CTT
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         38789 10 +     40653 T---------T---------TTTTTCTT
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                            9347  9 -     12194 T---------T---------TTTT-CTT
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     22769  9 -     27512 T---------T---------TTTT-CTT
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         31788  9 -     33692 T---------T---------TTTT-CTT
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Symphalangus_syndactylus.tarseq_24                     13898754  7 +  13920577 C---------T---------TTTT---T
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tarsius_lariang.k141_609102                               23486  8 +     42269 ----------T-------TTTTTT---G
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               56801  9 +     65473 T---------T-------TTTTTT---G
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194004091  8 - 194193292 t---------t---------t--ttcct
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Trachypithecus_auratus.k141_738098                        23165  9 +     38948 T---------T---------TTTT-CTT
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   16892  9 -     32910 T---------T---------TTCT-CTT
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       22790  9 +     24652 T---------T---------TTTT-CTT
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      1668  9 -      3559 T---------T---------TTCT-CTT
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           39614  9 -     54611 T---------T---------TTTT-CTT
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       15613  9 +     17312 T---------T---------TTTT-CTT
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    22976  9 -     25040 T---------T---------TTCT-CTT
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          1642  9 +      3528 T---------T---------TTCT-CTT
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  48004  9 +     51589 T---------T---------TTCT-CTT
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       11179 10 +     14732 T--------TT---------TTTT-CTT
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       1657  9 -     28054 T---------T---------TTTT-CTT
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44656452  9 -  44834318 T---------T---------TTTT-CTT
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        1462  9 +      3372 T---------T---------TTTT-CTT
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Varecia_rubra.k141_432109                                  2221  6 -     20643 t---------tttt------t-------
i Varecia_rubra.k141_432109                             C 0 I 3
s Varecia_variegata.k141_775891                             21767  6 -     33872 t---------tttt------t-------
i Varecia_variegata.k141_775891                         C 0 I 3
e Sorex_araneus.JH798170.1                               17747651  5 -  27805282 I
e Dinomys_branickii.DinBra_scaffold_1996                   154650  2 +    228994 I
e Erinaceus_europaeus.JH835290.1                         11529684  5 +  16010500 I
e Chaetophractus_vellerosus.ChaVel_scaffold_1070855           280  5 -      1715 I
e Aplodontia_rufa.AprRuf_scaffold_156013                      909  0 +      5067 C
e Oryctolagus_cuniculus.CM000803.1                      141872644  2 + 163896628 I
e Ochotona_princeps.JH802095.1                            4992673  2 -  23139505 I
e Lepus_americanus.LepAme_scaffold_62849                     9995  2 +     22452 I
e Perognathus_longimembris.PerPac_flattened_line_22291      39947  2 -     45160 I
e Dipodomys_stephensi.DipSte_scaffold_44365                 23957  2 +     28912 I
e Dipodomys_ordii.KN672545.1                              3652403  2 +   4240102 I
e Suricata_suricatta.SurSur_flattened_line_20339            24378  5 +     62062 I
e Chrysochloris_asiatica.ChrAsi_scaffold_141308              5993  7 -     12508 I
e Ziphius_cavirostris.ZipCav_flattened_line_127025           4282  4 -      8775 I
e Zalophus_californianus.ZalCal_flattened_line_4097        211070  5 -    227762 I
e Vulpes_lagopus.VulLag_flattened_line_2045                134543  5 -    281493 I
e Vicugna_pacos.KN269600.1                                1522088  4 -   2331223 I
e Ursus_maritimus.KK498671.1                              6511395  5 +  28682327 I
e Uropsilus_gracilis.UroGra_scaffold_4143_0                 23955  5 -     25548 I
e Tursiops_truncatus.MRVK01000923.1                      69310779  4 -  96451834 I
e Trichechus_manatus.JH594618.1                          16078742  5 +  31416278 I
e Tragulus_javanicus.TraJav_scaffold_14717                   2635  4 +     90398 I
e Tonatia_saurophila.TonSau_scaffold_3334                  133290  4 -    259118 I
e Tolypeutes_matacus.TolMat_scaffold_269431                  1000  4 +      6782 I
e Tapirus_terrestris.TapTer_scaffold_14939                  54815 10 +     99546 I
e Tapirus_indicus.TapInd_scaffold_176                      804155 10 +   1148477 I
e Tamandua_tetradactyla.TamTet_scaffold_26877               12148 11 +     45698 I
e Tadarida_brasiliensis.TadBra_scaffold_145589               3224  3 -      6213 I
e Sus_scrofa.CM000824.4                                 189269283  4 + 218635234 I
e Spilogale_gracilis.SpiGra_flattened_line_905             231808  5 -    276980 I
e Solenodon_paradoxus.SolPar_flattened_line_1012            15272  5 +    739146 I
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   28760  5 -    114521 I
e Saiga_tatarica.SaiTat_scaffold_82192                       5002  4 +     12214 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                16706  4 +    109198 I
e Rhinolophus_sinicus.LVEH01000179.1                      1784999  4 +   2252614 I
e Rangifer_tarandus.RanTarSib_scaffold_24239                13220  4 +     68503 I
e Puma_concolor.QAVW01000427.1                          131531127  5 - 161321710 I
e Pteropus_vampyrus.KN525959.1                             601357  4 -   3946241 I
e Pteropus_alecto.KB031157.1                             13243404  4 -  17261082 I
e Pteronura_brasiliensis.PteBra_flattened_line_1343        242811  5 -    344369 I
e Pteronotus_parnellii.KE867983.1                            1284  4 -     27784 I
e Procavia_capensis.ProCapCap_scaffold_15315                73366  5 +     78963 I
e Platanista_gangetica.PlaMin_flattened_line_72990           2745  4 +     21690 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            93631  8 +    112873 I
e Phocoena_phocoena.PhoPho_flattened_line_11948            118678  4 -    122454 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    112497  5 -    135482 I
e Pantholops_hodgsonii.KE114631.1                         1063572  4 -   1292953 I
e Panthera_tigris.KE721879.1                              5024315  5 -   6340057 I
e Panthera_pardus.KV860323.1                              3634537  5 +  18214204 I
e Panthera_onca.PanOnc_flattened_line_1615                  30934  5 +    295523 I
e Ovis_canadensis.OviCan_scaffold_6251                      75928  4 +    140051 I
e Ovis_aries.CM001582.2                                 134074714  4 - 275406953 I
e Otocyon_megalotis.JAEUCK010005121.1                      304473  5 -    505867 I
e Orycteropus_afer.OryAfe_flattened_line_13509              40523  3 -     66828 I
e Orcinus_orca.KB316965.1                                 7222061  4 -   7562323 I
e Okapia_johnstoni.LVCL01S0017931.1                         34298  4 +     78940 I
e Odocoileus_virginianus.KZ101650.1                       1077134  4 +   1425656 I
e Odobenus_rosmarus.KB229369.1                             676345  5 -   3126709 I
e Nyctereutes_procyonoides.CAJHUB010000786.1                27137  5 +   3668941 I
e Noctilio_leporinus.NocLep_scaffold_12062                  46734  4 +     94413 I
e Neophocaena_asiaeorientalis.KZ688543.1                  3948377  4 -   4490290 I
e Neomonachus_schauinslandi.NINY01007774.1                4481687  5 -  14209539 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             2474 10 -      8794 I
e Myotis_myotis.MyoMyo_scaffold_6123                         7641  0 +     66751 C
e Myotis_lucifugus.GL429887.1                             3462452  0 -   3747815 C
e Myotis_davidii.KB114863.1                               5016535  6 +   6462685 I
e Myotis_brandtii.KE161952.1                               964866  0 +   8389877 C
e Mustela_putorius.JH417978.1                             4420931  5 -  28371801 I
e Murina_feae.MurFea_scaffold_2254                          16540  0 -    100666 C
e Mungos_mungo.MunMun_flattened_line_8729                  141709  5 -    168139 I
e Moschus_moschiferus.MosMos_scaffold_146101                 2011  4 -      4346 I
e Mormoops_blainvillei.MorMeg_scaffold_2952                158617  4 +    265003 I
e Monodon_monoceros.MonMon_M_scaffold_5598                 143768  4 +    154973 I
e Mirounga_angustirostris.MirAng_flattened_line_8852         8086  5 -    104932 I
e Miniopterus_schreibersii.MinSch_scaffold_24116            31488  2 +     45743 I
e Miniopterus_natalensis.LDJU01000022.1                   8206807 11 +  10048721 I
e Micronycteris_hirsuta.MicHir_scaffold_37978               20080  4 -     32043 I
e Microgale_talazaci.MicTal_scaffold_34660                  28446  3 -     48017 I
e Mesoplodon_bidens.MesBid_scaffold_183284                   1041  4 +      2166 I
e Mellivora_capensis.MelCap_flattened_line_1828            226044  5 -    226874 I
e Megaderma_lyra.MegLyr_scaffold_3562                       61676  4 -    234502 I
e Manis_pentadactyla.KN017078.1                             33469  5 +     58827 I
e Manis_javanica.JSZB01003966.1                            143402  4 +    252755 I
e Lycaon_pictus.CM007556.1                               11084142  5 +  39895028 I
e Loxodonta_africana.GL010040.1                          20588263  5 -  62548349 I
e Lipotes_vexillifer.KE558548.1                            133345  4 +   3060487 I
e Leptonychotes_weddellii.KB714749.1                      3082788  5 -   3498232 I
e Lasiurus_borealis.LasBor_scaffold_5102                   111019  7 -    115756 I
e Kogia_breviceps.KogBre_flattened_line_35920               21003  4 +     37189 I
e Inia_geoffrensis.IniGeo_flattened_line_66725               6169  4 +     17520 I
e Hyaena_hyaena.HyaHya_flattened_line_20729                 13087  5 -     67322 I
e Hipposideros_galeritus.HipGal_scaffold_104691              5068  4 -      9143 I
e Hipposideros_armiger.JXIK01001085.1                      275912  4 -    477199 I
e Hippopotamus_amphibius.HipAmp_scaffold_1308              144492  4 +    277961 I
e Heterohyrax_brucei.HetBruBak_scaffold_25354               53502  5 +     73687 I
e Hemitragus_hylocrius.HemHyl_scaffold_16669                24912  4 -     91191 I
e Helogale_parvula.HelPar_flattened_line_22962              14021  5 +     53719 I
e Giraffa_tippelskirchi.LVKQ01S012154.1                    178426  4 -    189561 I
e Felis_nigripes.FelNig_flattened_line_8080                 17976  5 +     52776 I
e Felis_catus_fca126.CM031420.1                         129276841  5 - 158578461 I
e Eubalaena_japonica.EubJap_flattened_line_7756             58810  4 +     89355 I
e Eschrichtius_robustus.EscRob_flattened_line_685          312381  4 +    330699 I
e Equus_przewalskii.ATBW01073585.1                          10087  5 +     92910 I
e Equus_caballus.CM000402.2                              13348597  5 +  41866177 I
e Equus_asinus.JREZ01000062.1                             5850094  5 -   7175178 I
e Enhydra_lutris.KZ291749.1                              85868546  5 +  99434291 I
e Elephantulus_edwardii.JH947210.1                        7803682  3 +  15467074 I
e Elaphurus_davidianus.JRFZ01086400.1                     1488901  4 +   1727528 I
e Eidolon_helvum.KE772537.1                                  9607  4 +     24177 I
e Echinops_telfairi.JH980316.1                           22991498  3 -  44670279 I
e Diceros_bicornis.DicBicMic_scaffold_170113                  625  5 +       818 I
e Dicerorhinus_sumatrensis.PEKH010003161.1                 319367  5 +    993696 I
e Desmodus_rotundus.KZ672188.1                           18696232  4 -  18957592 I
e Delphinapterus_leucas.KZ290064.1                       80034243  4 -  96802777 I
e Dasypus_novemcinctus.JH568778.1                          179090  4 -   6883506 I
e Cryptoprocta_ferox.CryFer_flattened_line_19014            48814  5 -     70449 I
e Crocidura_indochinensis.CroInd_scaffold_38409             16132  5 -     19186 I
e Craseonycteris_thonglongyai.CraTho_scaffold_22679         36618  4 -     40477 I
e Condylura_cristata.JH655880.1                          60610166  5 +  78930452 I
e Choloepus_hoffmanni.KN194586.1                           759208  3 +    964067 I
e Choloepus_didactylus.ChoDid_scaffold_36182                13902  3 -     21363 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_160623          460  5 -      9338 I
e Catagonus_wagneri.CatWag_scaffold_1305                   156216  4 -    276539 I
e Carollia_perspicillata.CarPer_scaffold_4436               56919  4 +     67245 I
e Capra_hircus.CM004562.1                               135703877  4 - 157403528 I
e Capra_aegagrus.CM003214.1                              21322650  4 + 157394656 I
e Canis_lupus_orion.HG994411.1                           16451720  5 -  44759192 I
e Canis_lupus_familiaris.chr31                           11084686  5 +  39895921 I
e Canis_lupus_dingo.QKWQ01001993.1                       11262157  5 -  35597290 I
e Canis_lupus_VD.CanFam_VD_scaffold_16982                   10515  5 +     87036 I
e CanFam4.chr31                                          11515498  5 +  39901454 I
e Camelus_ferus.KB016973.1                                2970445  4 +   6889770 I
e Camelus_dromedarius.KN271192.1                           394708  4 -  15254737 I
e Camelus_bactrianus.KN276303.1                           3217007  4 -   8989139 I
e Bubalus_bubalis.KI419065.1                              1228375  4 -   1914593 I
e Bos_taurus.CM000177.6                                 136292755  4 - 158972876 I
e Bos_mutus.JH883513.1                                     569399  4 -    998990 I
e Bos_indicus.CM003021.1                                138137022  4 - 161108492 I
e Bison_bison.KN264915.1                                  6556787  4 +   6870073 I
e Beatragus_hunteri.BeaHun_scaffold_21644                   40643  4 -     72089 I
e Balaenoptera_bonaerensis.DF502048.1                        2728  4 -     13118 I
e Balaenoptera_acutorostrata.KI537095.1                  26377497  4 +  51448160 I
e Artibeus_jamaicensis.ArtJam_scaffold_41619                 5880  4 -     29036 I
e Antilocapra_americana.AntAmePen_scaffold_42841            28176  4 +     33004 I
e Anoura_caudifer.AnoCau_scaffold_422                      387738  4 -    631301 I
e Ammotragus_lervia.NIVO01013474.1                        3517543  4 +   4113121 I
e Ailurus_fulgens.LNAC01000003.1                          7090824  5 -  16596857 I
e Ailuropoda_melanoleuca.LNAT01000321.1                  10654121  5 +  23371972 I
e Acinonyx_jubatus.LLWD01000356.1                         2030787  5 +   3721120 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16291  1 -    119109 I
e Glis_glis.GliGli_scaffold_79770                            9627  2 -     18683 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     12283  2 -     20485 I
e Jaculus_jaculus.JH725517.1                              8561873  2 +  11848649 I
e Allactaga_bullata.AllBul_scaffold_70162                    8911  2 -     22067 I
e Microtus_ochrogaster.CM001673.1                        22816306  6 -  98408828 I
e Xerus_inauris.XerIna_scaffold_7898                       124051  0 -    134049 C
e Tupaia_tana.TupTan_flattened_line_68454                    1128  2 +     13056 I
e Tupaia_chinensis.KB320831.1                             2788590  2 -   3938065 I
e Spermophilus_dauricus.KZ294190.1                        2236948  0 +   2842873 C
e Sigmodon_hispidus.SigHis_scaffold_11332                   96367  5 -    120886 I
e Rattus_norvegicus.chr11                                13912186  6 +  90463843 I
e Psammomys_obesus.NESX01026517.1                           30143  5 +     77221 I
e Peromyscus_maniculatus.KI615518.1                       4946753  5 -   8017169 I
e Onychomys_torridus.OnyTor_scaffold_12578                  33579  6 +     62360 I
e Ondatra_zibethicus.OndZib_scaffold_6821                  121639  6 +    145789 I
e Octodon_degus.JH651621.1                                3678743 1836 +  10294119 I
e Nannospalax_galili.KL204535.1                           2056860 20 +   2354432 I
e Myocastor_coypus.MyoCoy_scaffold_3653                     87101  0 -    117718 C
e Muscardinus_avellanarius.MusAve_scaffold_9643              8138  2 +     98495 I
e Mus_spretus.CM004110.1                                 74327278  6 +  97876770 I
e Mus_pahari.LT608305.1                                  67552266  6 +  89017189 I
e Mus_musculus.chr16                                     75486102  6 +  98207768 I
e Mus_caroli.LT608236.1                                  70763028  6 +  92629107 I
e Mesocricetus_auratus.KB708139.1                         1043418  6 -  26018355 I
e Meriones_unguiculatus.MerUng_scaffold_52233                8614  6 +     15977 I
e Marmota_marmota.CZRN01000005.1                         36870872  0 +  64221397 C
e Ictidomys_tridecemlineatus.JH393315.1                   7123028  0 +  13083262 C
e Hystrix_cristata.HysCri_scaffold_50788                     3135  2 +     22540 I
e Heterocephalus_glaber.JH602058.1                        2548028 229 +  31725842 I
e Graphiurus_murinus.GraMur_scaffold_4493                   74178  2 +    118900 I
e Fukomys_damarensis.KN123630.1                          13889876  0 -  19261668 C
e Ellobius_talpinus.LOJH01090055.1                           3165  6 -      7838 I
e Ellobius_lutescens.LOEQ01003611.1                        236157  6 -    369425 I
e Dolichotis_patagonum.DolPat_scaffold_14102                33375  0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             56104 16 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                14631 16 +     26546 I
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 27476  0 -     67205 C
e Ctenodactylus_gundi.CteGun_scaffold_447                  205258  2 -    956709 I
e Cricetulus_griseus.LT883672.1                          53025689  6 +  72327488 I
e Cricetomys_gambianus.CriGam_scaffold_949                 274502  6 -    399297 I
e Chinchilla_lanigera.JH721867.1                         15958785  2 +  43084221 I
e Cavia_tschudii.CavTsc_scaffold_488                       173989  0 +    436027 C
e Cavia_porcellus.DS562889.1                             15795798  0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15783848 16 -  24422027 I
e Castor_canadensis.CasCan_scaffold_47037                   27418  2 +     33760 I
e Capromys_pilorides.CapPil_scaffold_647363                  1402  3 +      1887 I
e Acomys_cahirinus.AcoCah_scaffold_1625                    109065  6 -    189883 I

a score=0.000000
s hg38.chr4_GL000008v2_random                                8721 13 +    209709 GTCAAGCT-------A-T-----T-G----T
s Acinonyx_jubatus.LLWD01000356.1                         2030792 13 +   3721120 GCCAATTA-------a-t-----t-g----t
i Acinonyx_jubatus.LLWD01000356.1                       I 5 I 5
s Acomys_cahirinus.AcoCah_scaffold_1625                    109071 13 -    189883 ACCAAGTC-------A-C-----T-G----C
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 6 I 2
s Ailuropoda_melanoleuca.LNAT01000321.1                  10654126 13 +  23371972 GCcaaata-------a-t-----t-g----t
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 5 I 6
s Ailurus_fulgens.LNAC01000003.1                          7090829 13 -  16596857 GCCAATTA-------A-T-----T-G----T
i Ailurus_fulgens.LNAC01000003.1                        I 5 I 8
s Allactaga_bullata.AllBul_scaffold_70162                    8913 13 -     22067 GAAAAATT-------A-T-----T-G----C
i Allactaga_bullata.AllBul_scaffold_70162               I 2 I 2
s Allenopithecus_nigroviridis.k141_3103707                  59735 13 +     61638 GTCTAGCT-------A-T-----T-G----C
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        51543 13 +     53391 GTCTAGCT-------A-T-----T-G----C
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         2267 13 +     72529 GTCTAGCT-------A-T-----T-G----C
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          1843 13 +      3797 GTCTAGCT-------A-T-----T-G----C
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             7021 13 -     18050 GTCAAGCT-------A-T-----T-G----C
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  8137 13 -     11521 GTCAAGCT-------A-T-----T-G----C
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              7698 13 -     21359 GTCAAGCT-------A-T-----T-G----C
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1856473                                6080 13 +      7227 GTCAAGCT-------A-T-----T-G----C
i Alouatta_juara.k141_1856473                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          6994 13 -     10438 GTCAAGCT-------A-T-----T-G----C
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            3649 13 +      7047 GTCAAGCT-------A-T-----T-G----C
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             6936 13 +     10410 GTCAAGCT-------A-T-----T-G----C
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                             734 13 -      4927 GTCAAGCT-------A-T-----T-G----C
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             3667 13 +      6429 GTCAAGCT-------A-T-----T-G----C
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3517547 13 +   4113121 ACCAATTA-------A-T-----C-a----t
i Ammotragus_lervia.NIVO01013474.1                      I 4 I 6
s Anoura_caudifer.AnoCau_scaffold_422                      387742 13 -    631301 TCCAATTA-------A-A-----T-G----C
i Anoura_caudifer.AnoCau_scaffold_422                   I 4 I 5
s Antilocapra_americana.AntAmePen_scaffold_42841            28180 13 +     33004 ACCAGTTA-------A-T-----C-A----T
i Antilocapra_americana.AntAmePen_scaffold_42841        I 4 I 6
s Aotus_azarae.k141_3170768                                 59381 13 +     78111 GTCAAGCT-------A-T-----T-G----T
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            2311 13 +     22701 GTCAAGTT-------A-T-----T-G----T
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5746269 13 +   9889416 gtcaaGCT-------A-T-----T-G----T
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             2850 13 -    104377 GTCAAGCT-------A-T-----T-G----T
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               2859 13 +     23246 GTCAAGCT-------A-T-----T-G----T
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                      909  9 +      5067 ATCA--TC-------A-T-----T-------
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 I 4
s Arctocebus_calabarensis.k141_1161114                      14860 13 +     17483 TCAAAGTC-------A-T-----T-T----T
i Arctocebus_calabarensis.k141_1161114                  I 3 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 5884 13 -     29036 GCCAATTA-------A-T-----T-G----C
i Artibeus_jamaicensis.ArtJam_scaffold_41619            I 4 I 5
s Ateles_geoffroyi_b.tarseq_2582                             9536122 13 +  39197703 GTCAAGCT-------A-T-----T-G----C
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             57406 13 +     85812 GACAAGCT-------A-T-----T-G----C
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 8405 13 +     89302 GTCAAGCT-------A-T-----T-G----C
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             12915 13 -     58268 GTCAAGCT-------A-T-----T-G----C
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             60901 13 +    119057 GTCAAGCT-------A-T-----T-G----C
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               2852 13 -     25888 GTCAAGCT-------A-T-----T-G----C
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 3607 12 -     16375 GCAAAGTC-------A-T-----T-T-----
i Avahi_laniger.k141_2840928                            I 8 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26377501 13 +  51448160 ACCAATTA-------a-c-----c-a----t
i Balaenoptera_acutorostrata.KI537095.1                 I 4 I 7
s Balaenoptera_bonaerensis.DF502048.1                        2732 13 -     13118 ACCAATTA-------A-c-----c-a----t
i Balaenoptera_bonaerensis.DF502048.1                   I 4 I 7
s Beatragus_hunteri.BeaHun_scaffold_21644                   40647 13 -     72089 ACCAATTA-------A-T-----C-A----T
i Beatragus_hunteri.BeaHun_scaffold_21644               I 4 I 6
s Bison_bison.KN264915.1                                  6556791 13 +   6870073 ACCAATTA-------A-T-----G-a----t
i Bison_bison.KN264915.1                                I 4 I 6
s Bos_indicus.CM003021.1                                138137026 13 - 161108492 ACCAATTA-------A-T-----G-a----t
i Bos_indicus.CM003021.1                                I 4 I 6
s Bos_mutus.JH883513.1                                     569403 13 -    998990 ACCAATTA-------A-T-----G-a----t
i Bos_mutus.JH883513.1                                  I 4 I 6
s Bos_taurus.CM000177.6                                 136292759 13 - 158972876 ACCAATTA-------A-T-----G-a----t
i Bos_taurus.CM000177.6                                 I 4 I 6
s Bubalus_bubalis.KI419065.1                              1228379 13 -   1914593 ACCAATTA-------A-T-----G-a----t
i Bubalus_bubalis.KI419065.1                            I 4 I 6
s Cacajao_ayresi.k141_724503                               110756 13 -    171031 GTCAAGCT-------A-T-----T-G----G
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                  9782 13 +    125063 GTCAAGCT-------A-T-----T-G----G
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                11830 13 -    216513 GTCAAGCT-------A-T-----T-G----G
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        4370 13 -    134917 GTCAAGCT-------A-T-----T-G----G
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3217011 13 -   8989139 gccaatta-------a-c-----c-t----t
i Camelus_bactrianus.KN276303.1                         I 4 I 5
s Camelus_dromedarius.KN271192.1                           394712 13 -  15254737 gccaatta-------a-c-----c-t----t
i Camelus_dromedarius.KN271192.1                        I 4 I 5
s Camelus_ferus.KB016973.1                                2970449 13 +   6889770 gccaatta-------a-c-----c-t----t
i Camelus_ferus.KB016973.1                              I 4 I 5
s CanFam4.chr31                                          11515503 13 +  39901454 GCCAACTA-------A-T-----T-G----T
i CanFam4.chr31                                         I 5 I 7
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   10520 13 +     87036 GCCAACTA-------A-T-----T-G----T
i Canis_lupus_VD.CanFam_VD_scaffold_16982               I 5 I 7
s Canis_lupus_dingo.QKWQ01001993.1                       11262162 13 -  35597290 gcCAACTA-------A-T-----T-G----t
i Canis_lupus_dingo.QKWQ01001993.1                      I 5 I 7
s Canis_lupus_familiaris.chr31                           11084691 13 +  39895921 gcCAACTA-------A-T-----T-G----t
i Canis_lupus_familiaris.chr31                          I 5 I 7
s Canis_lupus_orion.HG994411.1                           16451725 13 -  44759192 gcCAACTA-------A-T-----T-G----t
i Canis_lupus_orion.HG994411.1                          I 5 I 7
s Capra_aegagrus.CM003214.1                              21322654 13 + 157394656 ACCAATTA-------A-T-----C-a----t
i Capra_aegagrus.CM003214.1                             I 4 I 6
s Capra_hircus.CM004562.1                               135703881 13 - 157403528 ACCAATTA-------A-T-----C-a----t
i Capra_hircus.CM004562.1                               I 4 I 6
s Carlito_syrichta.NW_007248099.1                          306013 12 +    345090 gtcaa-gc-------a-A-----T-T----A
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               56923 13 +     67245 GCCAATTA-------A-T-----T-G----C
i Carollia_perspicillata.CarPer_scaffold_4436           I 4 I 5
s Castor_canadensis.CasCan_scaffold_47037                   27420 11 +     33760 GCCAA--C-------A-T-----T-T----T
i Castor_canadensis.CasCan_scaffold_47037               I 2 I 1
s Catagonus_wagneri.CatWag_scaffold_1305                   156220 12 -    276539 GTCAACTG-------A-C-----C-A-----
i Catagonus_wagneri.CatWag_scaffold_1305                I 4 I 6
s Cebus_albifrons.Contig22                               18887597 13 -  29618158 GTCAAGCT-------A-T-----T-G----C
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 5141 13 -     26817 GTCAAGCT-------A-T-----T-G----C
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                 9384 13 +     25043 GTCAAGCT-------A-T-----T-G----C
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         5054  8 +     21754 A-----GC-------A-A-----T-T----A
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4360710 20 +   7569818 GCCAACTAAAAATGTA-T-----T-G----T
i Ceratotherium_simum.JH767818.1                        I 5 I 5
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623          465 20 -      9338 GCCAACTAAAAATGTA-T-----T-G----T
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    I 5 I 5
s Cercocebus_atys.KQ010443.1                              6551531 13 +   6739814 gtctagCT-------A-T-----T-G----C
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      53008 13 -     54931 GTCTAGCT-------A-T-----T-G----C
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         17992 13 -     19697 GTCTAGCT-------A-T-----T-G----C
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         55523 13 -    107033 GTCTAGCT-------A-T-----T-G----C
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        1964 13 -      3853 GTCTAGCT-------A-T-----T-G----C
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          25897 13 +     30494 GTCTAGCT-------A-T-----T-G----C
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           1921 13 -      4022 GTCTAGCT-------A-T-----T-G----C
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          1814 13 -      3505 GTCTAGCT-------A-T-----T-G----C
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           20618 13 +     35983 GTCTAGCT-------A-T-----T-G----C
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11987140 13 +  12117833 GTCTAGCT-------A-T-----T-G----C
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46473893 13 +  46592721 GTCTAGCT-------A-T-----T-G----C
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      31720 13 +     33420 GTCTAGCT-------A-T-----T-G----C
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        1756 13 -      3443 GTCTAGCT-------A-T-----T-G----C
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      2747 13 -      4669 GTCTAGCT-------A-T-----T-G----C
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        2547 13 -      4411 GTCTAGCT-------A-T-----T-G----C
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         2072 13 -      4205 GTCTAGCT-------A-T-----T-G----C
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_1070855           285 13 -      1715 CCTAATTC-------C-T-----A-G----T
i Chaetophractus_vellerosus.ChaVel_scaffold_1070855     I 5 I 3
s Cheirogaleus_major.k141_1157592                           55914 12 -     68416 GCAAAGTC-------A-T-----T-T-----
i Cheirogaleus_major.k141_1157592                       I 3 C 0
s Cheirogaleus_medius.k141_133808                            4959 13 +     13308 GCAAAGTC-------A-T----TT-T-----
i Cheirogaleus_medius.k141_133808                       I 3 C 0
s Cheracebus_lucifer.k141_619653                             2399 13 -     18223 GTCAAGCT-------A-T-----T-A----C
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             19422 13 +     25473 GTCAAGCT-------A-T-----T-A----C
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           38461 13 +     57117 GTCAAGCT-------A-T-----T-A----C
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          43136 13 +     54541 GTCAAGCT-------A-T-----T-A----C
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15958787 13 +  43084221 GTTAACtc-------a-t-----t-g----t
i Chinchilla_lanigera.JH721867.1                        I 2 I 5
s Chiropotes_israelita.k141_1189915                         67977 13 +    196370 GTCAAGCT-------A-T-----T-G----G
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          12158 13 +     40510 GTCAAGCT-------A-T-----T-G----G
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15135353 13 -  15256731 GTCTAGCT-------A-T-----T-G----C
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      30399 13 -     53260 GTCTAGCT-------A-T-----T-G----C
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101140848 13 + 101219884 gtctagCT-------A-T-----T-G----C
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                13905 13 -     21363 CCGAAAGT-------C-T-----T-C----T
i Choloepus_didactylus.ChoDid_scaffold_36182            I 3 I 4
s Choloepus_hoffmanni.KN194586.1                           759211 13 +    964067 CCTAAAGT-------C-T-----T-C----T
i Choloepus_hoffmanni.KN194586.1                        I 3 I 4
s Chrysochloris_asiatica.ChrAsi_scaffold_141308              6000 13 -     12508 CTCAGTTT-------G-T-----A-G----T
i Chrysochloris_asiatica.ChrAsi_scaffold_141308         I 7 I 3
s Colobus_angolensis.KN985967.1                          10879427 13 +  10971483 gtctagCT-------A-T-----T-G----C
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147660585 13 + 156195979 GTCTAGCT-------A-T-----T-G----A
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            12572 13 +     23629 GTCTAGCT-------A-T-----T-G----C
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60610171  8 +  78930452 a-----ta-------a-t-----t-a----A
i Condylura_cristata.JH655880.1                         I 5 I 6
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         36622 13 -     40477 GCTAATTG-------T-A-----A-T----G
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     I 4 I 4
s Cricetomys_gambianus.CriGam_scaffold_949                 274508 13 -    399297 GAAAATTA-------A-C-----T-A----A
i Cricetomys_gambianus.CriGam_scaffold_949              I 6 I 2
s Cricetulus_griseus.LT883672.1                          53025695 13 +  72327488 tccaattc-------A-C-----C-A----T
i Cricetulus_griseus.LT883672.1                         I 6 I 2
s Crocidura_indochinensis.CroInd_scaffold_38409             16137  6 -     19186 GTCAAT-------------------------
i Crocidura_indochinensis.CroInd_scaffold_38409         I 5 I 8
s Cryptoprocta_ferox.CryFer_flattened_line_19014            48819 13 -     70449 GCCAATTA-------A-T-----T-G----T
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 5 I 5
s Ctenodactylus_gundi.CteGun_scaffold_447                  205260  8 -    956709 GCTAAGTC-----------------------
i Ctenodactylus_gundi.CteGun_scaffold_447               I 2 I 9
s Dasypus_novemcinctus.JH568778.1                          179094 13 -   6883506 CCTAATTC-------C-C-----a-g----a
i Dasypus_novemcinctus.JH568778.1                       I 4 I 3
s Daubentonia_madagascariensis.ctg11                     16841782 13 +  31942871 GAAAAGTC-------A-T-----A-T----T
i Daubentonia_madagascariensis.ctg11                    I 3 C 0
s Delphinapterus_leucas.KZ290064.1                       80034247 13 -  96802777 ACCAATTG-------A-c-----c-a----t
i Delphinapterus_leucas.KZ290064.1                      I 4 I 7
s Desmodus_rotundus.KZ672188.1                           18696236 13 -  18957592 Gccaatta-------a-t-----t-g----t
i Desmodus_rotundus.KZ672188.1                          I 4 I 5
s Dicerorhinus_sumatrensis.PEKH010003161.1                 319372 20 +    993696 GCCAACTAAAAATGTA-T-----T-G----T
i Dicerorhinus_sumatrensis.PEKH010003161.1              I 5 I 5
s Diceros_bicornis.DicBicMic_scaffold_170113                  630 20 +       818 GCTAACTAAAAATGTA-T-----T-G----T
i Diceros_bicornis.DicBicMic_scaffold_170113            I 5 I 5
s Dinomys_branickii.DinBra_scaffold_1996                   154652 13 +    228994 GTTAACTC-------A-T-----T-G----T
i Dinomys_branickii.DinBra_scaffold_1996                I 2 I 5
s Dipodomys_ordii.KN672545.1                              3652405 13 +   4240102 GCCAAGTC-------A-T-----G-T----T
i Dipodomys_ordii.KN672545.1                            I 2 I 5
s Dipodomys_stephensi.DipSte_scaffold_44365                 23959 13 +     28912 GCCAAGTC-------A-T-----G-T----T
i Dipodomys_stephensi.DipSte_scaffold_44365             I 2 I 5
s Echinops_telfairi.JH980316.1                           22991501  5 -  44670279 ---------------t-t-----t-g----t
i Echinops_telfairi.JH980316.1                          I 3 I 6
s Eidolon_helvum.KE772537.1                                  9611 13 +     24177 Gacaatta-------a-t-----t-g----t
i Eidolon_helvum.KE772537.1                             I 4 I 6
s Elaphurus_davidianus.JRFZ01086400.1                     1488905 13 +   1727528 ACCAATTA-------A-T-----C-a----t
i Elaphurus_davidianus.JRFZ01086400.1                   I 4 I 6
s Elephantulus_edwardii.JH947210.1                        7803685 13 +  15467074 CCctactc-------c-t-----t-t----t
i Elephantulus_edwardii.JH947210.1                      I 3 I 13
s Ellobius_lutescens.LOEQ01003611.1                        236163 13 -    369425 GCTAGTTc-------a-c-----t-a----t
i Ellobius_lutescens.LOEQ01003611.1                     I 6 I 2
s Ellobius_talpinus.LOJH01090055.1                           3171 13 -      7838 gctagttc-------a-c-----t-a----t
i Ellobius_talpinus.LOJH01090055.1                      I 6 I 2
s Enhydra_lutris.KZ291749.1                              85868551 13 +  99434291 GCCAGTTA-------A-T-----T-G----T
i Enhydra_lutris.KZ291749.1                             I 5 I 7
s Equus_asinus.JREZ01000062.1                             5850099 13 -   7175178 gCCAACTA-------A-T-----T-G----T
i Equus_asinus.JREZ01000062.1                           I 5 I 5
s Equus_caballus.CM000402.2                              13348602 13 +  41866177 gcCAACTA-------A-T-----T-G----T
i Equus_caballus.CM000402.2                             I 5 I 5
s Equus_przewalskii.ATBW01073585.1                          10092 13 +     92910 gcCAACTA-------A-T-----T-G----T
i Equus_przewalskii.ATBW01073585.1                      I 5 I 5
s Erinaceus_europaeus.JH835290.1                         11529689 11 +  16010500 GCGGATTA-------T-C-----T-------
i Erinaceus_europaeus.JH835290.1                        I 5 I 7
s Erythrocebus_patas.Contig8                             48767532 13 -  48907691 GTGTAGCT-------A-T-----T-G----C
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          312385 13 +    330699 ACCAATTA-------A-C-----C-A----T
i Eschrichtius_robustus.EscRob_flattened_line_685       I 4 I 7
s Eubalaena_japonica.EubJap_flattened_line_7756             58814 13 +     89355 ACCAATTA-------A-C-----C-A----T
i Eubalaena_japonica.EubJap_flattened_line_7756         I 4 I 7
s Eulemur_albifrons.k141_715837                              1975 13 +     13586 GCAAAGTC-------A-T-----G-G----G
i Eulemur_albifrons.k141_715837                         I 4 I 1
s Eulemur_collaris.k141_311830                               1909 13 -      6809 GCAAAGTC-------A-T-----G-G----G
i Eulemur_collaris.k141_311830                          I 4 I 1
s Eulemur_coronatus.k141_3240342                             8382 14 +     36558 GCAAAGTC-------A-T-----TGG----G
i Eulemur_coronatus.k141_3240342                        I 3 I 1
s Eulemur_flavifrons.k141_903901                             4698 13 +     60246 GCAAAGTC-------A-T-----T-G----G
i Eulemur_flavifrons.k141_903901                        I 3 I 1
s Eulemur_fulvus.k141_653297                                 8187 13 +    109717 GCAAAGTC-------A-T-----T-G----G
i Eulemur_fulvus.k141_653297                            I 4 I 1
s Eulemur_macaco.k141_1341545                               12560 13 +     16540 GCAAAGTC-------A-T-----T-G----G
i Eulemur_macaco.k141_1341545                           I 3 I 1
s Eulemur_mongoz.k141_825972                                12837 13 +     27497 GCAAAGTC-------A-T-----T-G----G
i Eulemur_mongoz.k141_825972                            I 3 I 1
s Eulemur_rubriventer.k141_411740                           15299 13 +     26808 GCAAAGTC-------A-T-----T-G----G
i Eulemur_rubriventer.k141_411740                       I 3 I 1
s Eulemur_rufus.k141_1620292                                30027 13 +     46535 GCAAAGTC-------A-T-----T-G----G
i Eulemur_rufus.k141_1620292                            I 4 I 1
s Eulemur_sanfordi.k141_186399                              12750 13 -     29447 GCAAAGTC-------A-T-----T-G----G
i Eulemur_sanfordi.k141_186399                          I 4 I 1
s Felis_catus.CM001386.2                                129889772 13 - 159252932 GCCAATTA-------a-t-----t-g----t
i Felis_catus.CM001386.2                                I 5 I 5
s Felis_catus_fca126.CM031420.1                         129276846 13 - 158578461 GCCAATTA-------a-t-----t-g----t
i Felis_catus_fca126.CM031420.1                         I 5 I 5
s Felis_nigripes.FelNig_flattened_line_8080                 17981 13 +     52776 GCCAATTA-------A-T-----T-G----T
i Felis_nigripes.FelNig_flattened_line_8080             I 5 I 5
s Galago_moholi.ctg555                                     207933 13 -    847004 ACCAAGTC-------A-T-----T-T----T
i Galago_moholi.ctg555                                  I 3 I 2
s Galago_senegalensis.k141_964197                           10313 13 -     43889 ACCAAGTC-------A-T-----T-T----T
i Galago_senegalensis.k141_964197                       I 3 I 2
s Galagoides_demidoff.k141_1769638                           7362 13 +     27357 ACAAAGTC-------A-T-----T-T----T
i Galagoides_demidoff.k141_1769638                      I 3 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               153234 13 +    324696 GACATGTC-------A-T-----T-G----T
i Galeopterus_variegatus.GalVar_scaffold_354            I 3 I 3
s Giraffa_tippelskirchi.LVKQ01S012154.1                    178430 13 -    189561 ACCAATTA-------A-T-----C-A----T
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 4 I 6
s Glis_glis.GliGli_scaffold_79770                            9629 13 -     18683 ACCAAGAC-------A-T-----T-G----C
i Glis_glis.GliGli_scaffold_79770                       I 2 I 5
s Gorilla_beringei.k141_111300                               2122 13 -     14630 GTCAAGCT-------A-T-----T-G----T
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119649221 13 - 195582420 gtcaagct-------a-t-----t-g----t
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   74180 13 +    118900 ACCAAGTC-------A-T-----T-G----C
i Graphiurus_murinus.GraMur_scaffold_4493               I 2 I 5
s Hapalemur_alaotrensis.k141_1198205                         2533 14 +      3980 ACAAAGTC-------A-T-----T-T---CT
i Hapalemur_alaotrensis.k141_1198205                    I 9 C 0
s Hapalemur_gilberti.k141_97962                             25009 13 +     26611 ACAAAGTC-------A-T-----T-T----T
i Hapalemur_gilberti.k141_97962                         I 6 C 0
s Hapalemur_griseus.k141_1387522                             2467 13 +     56096 ACAAAGTC-------A-T-----T-T----T
i Hapalemur_griseus.k141_1387522                        I 9 C 0
s Hapalemur_meridionalis.k141_186231                        25740 15 -     42470 acaaagtc-------a-ttt---t-t----t
i Hapalemur_meridionalis.k141_186231                    I 9 C 0
s Hapalemur_occidentalis.k141_797938                        42337 13 -     54384 acaaagtc-------a-t-----t-t----t
i Hapalemur_occidentalis.k141_797938                    I 6 C 0
s Helogale_parvula.HelPar_flattened_line_22962              14026 13 +     53719 GCCAATTA-------A-T-----T-G----T
i Helogale_parvula.HelPar_flattened_line_22962          I 5 I 5
s Hemitragus_hylocrius.HemHyl_scaffold_16669                24916 13 -     91191 ACCAATTA-------A-T-----C-A----T
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 4 I 6
s Heterohyrax_brucei.HetBruBak_scaffold_25354               53507 13 +     73687 ACCATTTT-------T-T-----G-G----T
i Heterohyrax_brucei.HetBruBak_scaffold_25354           I 5 I 6
s Hippopotamus_amphibius.HipAmp_scaffold_1308              144496 13 +    277961 ACCAATTA-------A-C-----C-A----T
i Hippopotamus_amphibius.HipAmp_scaffold_1308           I 4 I 8
s Hipposideros_armiger.JXIK01001085.1                      275916 13 -    477199 GCCAActa-------a-t-----t-g----t
i Hipposideros_armiger.JXIK01001085.1                   I 4 I 21
s Hipposideros_galeritus.HipGal_scaffold_104691              5072 13 -      9143 GCCAACTA-------A-T-----T-G----T
i Hipposideros_galeritus.HipGal_scaffold_104691         I 4 I 23
s Hoolock_leuconedys.ctg79                                         4 13 -   7690867 GTCAAGCT-------A-T-----T-G----T
i Hoolock_leuconedys.ctg79                                 n 62 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 13092 13 -     67322 GCCAATTA-------A-T-----T-G----T
i Hyaena_hyaena.HyaHya_flattened_line_20729             I 5 I 5
s Hylobates_abbotti.k141_493872                              1927 13 +      5897 GTCAAGCT-------A-T-----T-G----T
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_282275                               1140 13 +      1846 GTCAAGCT-------A-T-----T-G----T
i Hylobates_agilis.k141_282275                          C 0 C 0
s Hylobates_klossii.k141_584463                               304 13 -      1009 GTCAAGCT-------A-T-----T-G----T
i Hylobates_klossii.k141_584463                         I 7 C 0
s Hylobates_pileatus_b.ContigUN                                 14621473 13 -  25970782 GTCAAGCT-------A-T-----T-G----T
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1133650                            1362 13 -      2775 GTCAAGCT-------G-T-----T-G----T
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             29965 13 -     60944 GTCAAGCT-------A-T-----T-G----T
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     3137 13 +     22540 GTCAACTC-------A-C-----T-G----T
i Hystrix_cristata.HysCri_scaffold_50788                I 2 I 5
s Ictidomys_tridecemlineatus.JH393315.1                   7123028 11 +  13083262 ATcaagtt-------a-a-----t-------
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 I 4
s Indri_indri.k141_1884019                                    195 13 -      2196 tctaagtt-------t-t-----t-t----t
i Indri_indri.k141_1884019                              I 4 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               6173 13 +     17520 ACCAATTG-------A-C-----C-A----T
i Inia_geoffrensis.IniGeo_flattened_line_66725          I 4 I 7
s Jaculus_jaculus.JH725517.1                              8561875 13 +  11848649 GAAAAATT-------A-C-----T-G----C
i Jaculus_jaculus.JH725517.1                            I 2 I 2
s Kogia_breviceps.KogBre_flattened_line_35920               21007 13 +     37189 ACCAATTG-------A-C-----C-A----T
i Kogia_breviceps.KogBre_flattened_line_35920           I 4 I 7
s Lagothrix_lagothricha.k141_12968                          46975 13 -    147782 GTCAAGCT-------A-T-----T-G----C
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lemur_catta.scaffold_1                                258404017 13 - 285822530 ACAAAGTC-------A-T-----T-T----T
i Lemur_catta.scaffold_1                                I 3 C 0
s Lepilemur_ankaranensis.k141_884009                        20908  9 +     39228 ---AAGTC-------A-T-----T-T-----
i Lepilemur_ankaranensis.k141_884009                    I 6 C 0
s Lepilemur_dorsalis.k141_134267                            50282  9 +     63517 ---AAGTC-------A-T-----T-T-----
i Lepilemur_dorsalis.k141_134267                        I 6 C 0
s Lepilemur_ruficaudatus.k141_617879                        75505  9 +    116806 ---AAGTC-------A-T-----T-T-----
i Lepilemur_ruficaudatus.k141_617879                    I 3 C 0
s Lepilemur_septentrionalis.k141_578524                     28545  9 -     33031 ---AAGTC-------a-t-----t-t-----
i Lepilemur_septentrionalis.k141_578524                 I 6 C 0
s Leptonychotes_weddellii.KB714749.1                      3082793 13 -   3498232 gcCAATTA-------A-T-----T-g----t
i Leptonychotes_weddellii.KB714749.1                    I 5 I 7
s Lepus_americanus.LepAme_scaffold_62849                     9997 13 +     22452 GTCAATCT-------G-T-----T-G----T
i Lepus_americanus.LepAme_scaffold_62849                I 2 I 5
s Lipotes_vexillifer.KE558548.1                            133349 13 +   3060487 ACCAATTG-------A-c-----c-a----t
i Lipotes_vexillifer.KE558548.1                         I 4 I 7
s Lophocebus_aterrimus.ctg55                             19244619 13 +  19376315 GTCTAGCT-------A-T-----T-A----C
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            7664 13 +     84689 ACAAAGTC-------T-T-----T-T----T
i Loris_lydekkerianus.k141_550999                       I 3 C 0
s Loris_tardigradus.ctg97                                 3775415 13 +   6799190 ACAAAGTC-------T-T-----T-T----T
i Loris_tardigradus.ctg97                               I 3 C 0
s Loxodonta_africana.GL010040.1                          20588268 13 -  62548349 cccaattt-------t-t-----t-g----t
i Loxodonta_africana.GL010040.1                         I 5 I 3
s Lycaon_pictus.CM007556.1                               11084147 13 +  39895028 gcCAACTA-------A-T-----T-G----t
i Lycaon_pictus.CM007556.1                              I 5 I 7
s Macaca_arctoides.k141_2201161                             16302 13 +     74745 GTCTAGCT-------A-T-----T-G----C
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12702808 13 +  12821369 GTCTAGCT-------A-T-----T-G----C
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               4904 13 +      6569 GTCTAGCT-------A-T-----T-G----C
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           43206 13 +     63263 GTCTAGCT-------C-T-----T-G----C
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_1068107                               11782 13 +     12679 GTCTAGCT-------A-T-----T-G----C
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                1355 13 +      3017 GTCTAGCT-------A-T-----T-G----C
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  42967 13 -     79256 GTCTAGCT-------A-T-----T-G----C
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196031885 13 + 196197964 gtctagCT-------A-T-----T-G----C
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11441991 13 +  11645122 gtctagCT-------A-T-----T-G----C
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   1914 13 -     46448 GTCTAGCT-------A-T-----T-G----C
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                1745 13 -      3617 GTCTAGCT-------A-T-----T-G----C
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 12077 13 -     55006 GTCTAGCT-------A-T-----T-G----C
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43837114 13 +  43892939 GTCTAGCT-------A-T-----T-G----C
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                4336 13 -      5978 GTCTAGCT-------A-T-----T-G----C
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               1919 13 -     27140 GTCTAGCT-------A-T-----T-G----C
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43433779 13 -  43563597 GTCTAGCT-------A-T-----T-G----C
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4446605 13 -   4543643 GTCTAGCT-------A-T-----T-G----C
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            143406 13 +    252755 Gccaatta-------a-t-----t-g----t
i Manis_javanica.JSZB01003966.1                         I 4 I 5
s Manis_pentadactyla.KN017078.1                             33474 13 +     58827 Gccaatta-------a-t-----t-a----t
i Manis_pentadactyla.KN017078.1                         I 5 I 5
s Marmota_marmota.CZRN01000005.1                         36870872 11 +  64221397 ATcaagtt-------a-a-----t-------
i Marmota_marmota.CZRN01000005.1                        C 0 I 4
s Megaderma_lyra.MegLyr_scaffold_3562                       61680 13 -    234502 GCCAATTC-------T-A-----T-T----T
i Megaderma_lyra.MegLyr_scaffold_3562                   I 4 I 6
s Mellivora_capensis.MelCap_flattened_line_1828            226049 13 -    226874 GCCAGTTA-------A-T-----T-G----T
i Mellivora_capensis.MelCap_flattened_line_1828         I 5 I 7
s Meriones_unguiculatus.MerUng_scaffold_52233                8620 13 +     15977 GCCAATTT-------G-C-----T-G----T
i Meriones_unguiculatus.MerUng_scaffold_52233           I 6 I 2
s Mesocricetus_auratus.KB708139.1                         1043424 13 -  26018355 TCCAATTC-------A-C-----T-A----T
i Mesocricetus_auratus.KB708139.1                       I 6 I 2
s Mesoplodon_bidens.MesBid_scaffold_183284                   1045 13 +      2166 ACCAACTG-------A-C-----C-A----T
i Mesoplodon_bidens.MesBid_scaffold_183284              I 4 I 6
s Microcebus_murinus.CM007691.1                          16507136 12 +  47401472 gcaaagtc-------a-t-----t-t-----
i Microcebus_murinus.CM007691.1                         I 2 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  28449  5 -     48017 ---------------T-G-----T-G----C
i Microgale_talazaci.MicTal_scaffold_34660              I 3 I 5
s Micronycteris_hirsuta.MicHir_scaffold_37978               20084 13 -     32043 GCCAATTA-------A-T-----T-G----C
i Micronycteris_hirsuta.MicHir_scaffold_37978           I 4 I 5
s Microtus_ochrogaster.CM001673.1                        22816312 13 -  98408828 GCTAGTTC-------a-c-----t-a----t
i Microtus_ochrogaster.CM001673.1                       I 6 I 2
s Miniopterus_natalensis.LDJU01000022.1                   8206818  9 +  10048721 ----ATTA-------T-A-----T-g----t
i Miniopterus_natalensis.LDJU01000022.1                 I 11 I 39
s Miniopterus_schreibersii.MinSch_scaffold_24116            31490  9 +     45743 ----ATTA-------T-A-----T-G----T
i Miniopterus_schreibersii.MinSch_scaffold_24116        I 2 I 37
s Miopithecus_ogouensis.k141_2666161                        32434 13 +     34273 GTCTAGCT-------A-T-----T-G----C
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         8091 13 -    104932 GCCAATTA-------A-T-----T-G----T
i Mirounga_angustirostris.MirAng_flattened_line_8852    I 5 I 7
s Mirza_zaza.k141_226143                                     2540 12 +      8497 GCAAAGTC-------A-T-----T-T-----
i Mirza_zaza.k141_226143                                I 2 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 143772 13 +    154973 ACCAATTG-------A-C-----C-A----T
i Monodon_monoceros.MonMon_M_scaffold_5598              I 4 I 7
s Mormoops_blainvillei.MorMeg_scaffold_2952                158621 13 +    265003 GTCAATTG-------A-T-----T-G----C
i Mormoops_blainvillei.MorMeg_scaffold_2952             I 4 I 5
s Moschus_moschiferus.MosMos_scaffold_146101                 2015 13 -      4346 ACCAATTA-------A-T-----C-A----T
i Moschus_moschiferus.MosMos_scaffold_146101            I 4 I 6
s Mungos_mungo.MunMun_flattened_line_8729                  141714 13 -    168139 GCCAATTA-------A-T-----T-G----T
i Mungos_mungo.MunMun_flattened_line_8729               I 5 I 5
s Mus_caroli.LT608236.1                                  70763034 13 +  92629107 GCCAATTC-------A-C-----T-A----t
i Mus_caroli.LT608236.1                                 I 6 I 2
s Mus_musculus.chr16                                     75486108 13 +  98207768 GCCAATTC-------A-C-----t-a----t
i Mus_musculus.chr16                                    I 6 I 2
s Mus_pahari.LT608305.1                                  67552272 13 +  89017189 GCCAATTC-------A-C-----T-A----T
i Mus_pahari.LT608305.1                                 I 6 I 2
s Mus_spretus.CM004110.1                                 74327284 13 +  97876770 NNNNNNNN-------N-N-----N-N----N
i Mus_spretus.CM004110.1                                I 6 I 2
s Muscardinus_avellanarius.MusAve_scaffold_9643              8140 13 +     98495 GCTAAATC-------A-T-----T-G----C
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 2 I 3
s Mustela_putorius.JH417978.1                             4420936 13 -  28371801 GCCAGTTA-------A-T-----T-G----T
i Mustela_putorius.JH417978.1                           I 5 I 7
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             2484 13 -      8794 CGTAATAC-------A-T-----T-A----T
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        I 10 I 4
s Nannospalax_galili.KL201303.1                            107494 13 +    362372 tccaaTCC-------A-T-----T-G----T
i Nannospalax_galili.KL201303.1                         I 25 I 9
s Nasalis_larvatus.k141_153429                               4816 13 +     48152 GTCTAGCT-------A-T-----T-G----C
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4481692 13 -  14209539 gcCAATTA-------A-T-----T-g----t
i Neomonachus_schauinslandi.NINY01007774.1              I 5 I 7
s Neophocaena_asiaeorientalis.KZ688543.1                  3948381 13 -   4490290 ACCAATTG-------A-c-----c-a----t
i Neophocaena_asiaeorientalis.KZ688543.1                I 4 I 7
s Noctilio_leporinus.NocLep_scaffold_12062                  46738 13 +     94413 GCCAATTA-------A-T-----T-G----C
i Noctilio_leporinus.NocLep_scaffold_12062              I 4 I 5
s Nomascus_annamensis.k141_1223136                          10596 13 -     11253 GTCAAGCT-------A-T-----T-G----T
i Nomascus_annamensis.k141_1223136                      C 0 C 0
s Nomascus_concolor.k141_468488                              1239 13 -      1482 GTCAAGCT-------A-T-----T-G----T
i Nomascus_concolor.k141_468488                         C 0 C 0
s Nomascus_gabriellae.k141_906566                            1228 13 -      2544 GTCAAGCT-------A-T-----T-G----T
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             21702 13 -  18771707 GTCAAGCT-------A-T-----T-G----T
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_844529                                   976 13 +      2124 GTCAAGCT-------A-T-----T-G----T
i Nomascus_siki_a.k141_844529                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                27142 13 +   3668941 gcCAACTA-------A-T-----T-G----t
i Nyctereutes_procyonoides.CAJHUB010000786.1            I 5 I 7
s Nycticebus_bengalensis.LG16                            65563994 13 -  95554990 ACAAAGTA-------T-T-----T-T----T
i Nycticebus_bengalensis.LG16                           I 3 C 0
s Nycticebus_coucang.k141_2051882                             839 13 +      6470 ACAAAGTA-------T-T-----T-T----T
i Nycticebus_coucang.k141_2051882                       I 3 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65666363 13 +  89412551 ACAAAGTA-------T-T-----T-T----T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     I 3 C 0
s Ochotona_princeps.JH802095.1                            4992675 13 -  23139505 GCCaattt-------a-t-----t-a----t
i Ochotona_princeps.JH802095.1                          I 2 I 304
s Odobenus_rosmarus.KB229369.1                             676350 13 -   3126709 GCCAATTA-------A-T-----T-g----t
i Odobenus_rosmarus.KB229369.1                          I 5 I 7
s Odocoileus_virginianus.KZ101650.1                       1077138 13 +   1425656 ACCAATTA-------A-T-----C-a----t
i Odocoileus_virginianus.KZ101650.1                     I 4 I 6
s Okapia_johnstoni.LVCL01S0017931.1                         34302 13 +     78940 ACCAATTA-------A-T-----C-A----T
i Okapia_johnstoni.LVCL01S0017931.1                     I 4 I 6
s Ondatra_zibethicus.OndZib_scaffold_6821                  121645 13 +    145789 GCTAGTTC-------A-C-----T-A----T
i Ondatra_zibethicus.OndZib_scaffold_6821               I 6 I 2
s Onychomys_torridus.OnyTor_scaffold_12578                  33585 10 +     62360 GCCAATTT-------G-C-------------
i Onychomys_torridus.OnyTor_scaffold_12578              I 6 I 4
s Orcinus_orca.KB316965.1                                 7222065 13 -   7562323 ACCAATTG-------A-C-----c-a----t
i Orcinus_orca.KB316965.1                               I 4 I 7
s Orycteropus_afer.OryAfe_flattened_line_13509              40526 13 -     66828 CTCAACTT-------T-T-----C-A----T
i Orycteropus_afer.OryAfe_flattened_line_13509          I 3 I 3
s Oryctolagus_cuniculus.CM000803.1                      141872646 13 + 163896628 gtcaGTCT-------G-T-----T-G----t
i Oryctolagus_cuniculus.CM000803.1                      I 2 I 5
s Otocyon_megalotis.JAEUCK010005121.1                      304478 13 -    505867 gcCAACTA-------A-T-----T-G----t
i Otocyon_megalotis.JAEUCK010005121.1                   I 5 I 7
s Otolemur_crassicaudatus.k141_321880                       36002 13 +     38679 ACCAAGTC-------A-T-----T-T----T
i Otolemur_crassicaudatus.k141_321880                   I 3 I 2
s Otolemur_garnettii.GL873528.1                          18005443 13 -  38779656 accaagtC-------A-T-----T-T----T
i Otolemur_garnettii.GL873528.1                         I 3 I 2
s Ovis_aries.CM001582.2                                 134074718 13 - 275406953 ACCAATTA-------A-T-----C-a----t
i Ovis_aries.CM001582.2                                 I 4 I 6
s Ovis_canadensis.OviCan_scaffold_6251                      75932 13 +    140051 ACCAATTA-------A-T-----C-A----T
i Ovis_canadensis.OviCan_scaffold_6251                  I 4 I 6
s Pan_paniscus.CM003386.1                               127571465 13 - 205426864 gtcaagct-------a-t-----t-g----t
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120148618 13 - 196562556 gtcaagct-------a-t-----t-g----t
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  30939 13 +    295523 GCCAATTA-------A-T-----T-G----T
i Panthera_onca.PanOnc_flattened_line_1615              I 5 I 5
s Panthera_pardus.KV860323.1                              3634542 13 +  18214204 GCCAATTA-------A-T-----T-G----T
i Panthera_pardus.KV860323.1                            I 5 I 5
s Panthera_tigris.KE721879.1                              5024320 13 -   6340057 gCCAATTa-------a-t-----t-g----t
i Panthera_tigris.KE721879.1                            I 5 I 5
s Pantholops_hodgsonii.KE114631.1                         1063576 13 -   1292953 ACCAATTA-------A-T-----C-a----t
i Pantholops_hodgsonii.KE114631.1                       I 4 I 6
s Papio_anubis.CM001492.2                               188152563 13 - 188283584 gtctagCT-------A-T-----T-G----C
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            48775 13 +     76494 GTCTAGCT-------A-T-----T-G----C
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47509960 13 +  47705337 GTCTAGCT-------A-T-----T-G----C
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 63942 13 -    104429 GTCTAGCT-------A-T-----T-G----C
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  13728 13 -     29451 GTCTAGCT-------A-T-----T-G----C
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                34131 13 +     35859 GTCTAGCT-------A-T-----T-G----C
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    112502 13 -    135482 GCCAGTTA-------A-T-----T-G----T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 I 5 I 5
s Perodicticus_ibeanus.k141_117958                           2056 13 -     23713 ACAAAGTC-------A-T-----T-T----T
i Perodicticus_ibeanus.k141_117958                      I 3 I 2
s Perodicticus_potto.k141_713187                            21354 13 -     27972 ACAAAGTC-------A-T-----T-T----T
i Perodicticus_potto.k141_713187                        I 4 I 2
s Perognathus_longimembris.PerPac_flattened_line_22291      39949 13 -     45160 GCCAAATC-------A-T-----G-T----T
i Perognathus_longimembris.PerPac_flattened_line_22291  I 2 I 5
s Peromyscus_maniculatus.KI615518.1                       4946758 10 -   8017169 GCCAATTT-------G-C-------------
i Peromyscus_maniculatus.KI615518.1                     I 5 I 4
s Phocoena_phocoena.PhoPho_flattened_line_11948            118682 13 -    122454 ACCAATTG-------A-C-----C-A----T
i Phocoena_phocoena.PhoPho_flattened_line_11948         I 4 I 8
s Piliocolobus_badius.k141_1497351                           1816 13 -      3310 GTCTAGCT-------A-T-----T-G----C
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       21722 13 -     82327 GTCTAGCT-------A-T-----T-G----C
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           18474 13 +     19957 GTCTAGCT-------A-T-----T-G----C
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26736483 13 +  26888534 gtctagCT-------A-T-----T-G----C
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pithecia_albicans.k141_991845                             40469 13 -     61926 GTCAAGCT-------A-T-----T-A----G
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        21898 13 +     78826 GTCAAGCT-------A-T-----T-A----G
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              5849 13 -     15800 GTCAAGCT-------A-T-----T-A----G
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                         9047 13 -     16101 GTCAAGCT-------A-T-----T-A----G
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          2356 13 +      9673 GTCAAGCT-------A-T-----T-A----G
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13471350 13 -  19735023 GTCAAGCT-------A-T-----T-A----T
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           10258 13 -     31692 GTCAAGCT-------A-T-----T-A----G
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           2749 13 +     21690 ACCAACTG-------A-C-----C-A----T
i Platanista_gangetica.PlaMin_flattened_line_72990      I 4 I 7
s Plecturocebus_bernhardi.k141_959214                       19665 13 +     44506 GTCAAGCT-------A-T-----T-A----C
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        19875 13 +     67491 GTCAAGCT-------A-T-----T-A----C
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      10120 13 -     98129 GTCAAGCT-------A-T-----T-A----C
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     19721 13 +    147771 GTCAAGCT-------A-T-----T-A----C
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        19971 13 -     23762 GTCAAGCT-------A-T-----T-A----C
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                           437 13 -     55515 GTCAAGCT-------A-T-----T-A----C
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         19790 13 +    152463 GTCAAGCT-------A-T-----T-A----C
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      6550 13 +      8943 GTCAAGCT-------A-T-----T-A----C
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                          9510 13 +    134592 GTCAAGCT-------A-T-----T-A----C
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          20100 13 -     75465 GTCAAGCT-------A-T-----T-A----C
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              184011 13 -    373494 gtcaagct-------A-T-----T-G----T
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19803918 13 +  19899266 GTCAAGCT-------A-T-----T-G----T
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               2054 13 -     15069 GTCTAGCT-------A-T-----T-G----C
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              2188 13 +     14865 GTCTAGCT-------A-T-----T-G----C
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                73371 13 +     78963 ACCATTTT-------T-T-----G-G----T
i Procavia_capensis.ProCapCap_scaffold_15315            I 5 I 3
s Prolemur_simus.MPIZ01000048.1                           6845394 13 +  12164890 acaaagtc-------a-t-----t-t----t
i Prolemur_simus.MPIZ01000048.1                         I 6 C 0
s Propithecus_coquerelli.NW_012147863.1                     13853 10 -     30946 gcaaagtc-------a-t-------------
i Propithecus_coquerelli.NW_012147863.1                 I 8 I 2
s Propithecus_coronatus.k141_1353159                          536 10 +     11805 GCAAAGTC-------A-T-------------
i Propithecus_coronatus.k141_1353159                    I 8 I 2
s Propithecus_diadema.k141_577245                           39867 14 +     52369 GCAAAGTC-------AGT-----T-T----T
i Propithecus_diadema.k141_577245                       I 8 C 0
s Propithecus_edwardsi.k141_1317105                         32255 13 -     44753 GCAAAGTC-------a-t-----t-t----t
i Propithecus_edwardsi.k141_1317105                     I 8 C 0
s Propithecus_perrieri.k141_7554                            14177 13 +     27322 GCAAAGTC-------A-T-----T-T----T
i Propithecus_perrieri.k141_7554                        I 8 C 0
s Propithecus_tattersalli.k141_907138                       13819 10 -     53241 GCAAAGTC-------A-T-------------
i Propithecus_tattersalli.k141_907138                   I 8 C 0
s Propithecus_verreauxi.k141_158021                         36091 10 -     48185 GCAAAGTC-------A-T-------------
i Propithecus_verreauxi.k141_158021                     I 8 I 2
s Psammomys_obesus.NESX01026517.1                           30148 13 +     77221 GCTAATTT-------G-C-----T-G----T
i Psammomys_obesus.NESX01026517.1                       I 5 I 5
s Pteronotus_parnellii.KE867983.1                            1288 13 -     27784 gccaatta-------a-t-----t-g----c
i Pteronotus_parnellii.KE867983.1                       I 4 I 5
s Pteronura_brasiliensis.PteBra_flattened_line_1343        242816 13 -    344369 GCCAGTTA-------A-T-----T-G----T
i Pteronura_brasiliensis.PteBra_flattened_line_1343     I 5 I 7
s Pteropus_alecto.KB031157.1                             13243408 13 -  17261082 Gacaatta-------a-t-----t-g----t
i Pteropus_alecto.KB031157.1                            I 4 I 6
s Pteropus_vampyrus.KN525959.1                             601361 13 -   3946241 GAcaatta-------a-t-----t-g----t
i Pteropus_vampyrus.KN525959.1                          I 4 I 6
s Puma_concolor.QAVW01000427.1                          131531132 13 - 161321710 GCCAATTA-------a-t-----t-g----t
i Puma_concolor.QAVW01000427.1                          I 5 I 5
s Pygathrix_cinerea.k141_374971                             26179 13 +     56732 GTCTAGCT-------A-T-----T-G----C
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6802670 13 +   6970761 GTCTAGCT-------A-T-----T-G----C
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             2063 13 +     18040 GTCTAGCT-------A-T-----T-G----C
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                13224 13 +     68503 ACCAATTA-------A-T-----C-A----T
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 4 I 6
s Rattus_norvegicus.chr11                                13912192 13 +  90463843 GTCAATTC-------A-C-----T-G----T
i Rattus_norvegicus.chr11                               I 6 I 5
s Rhinolophus_sinicus.LVEH01000179.1                      1785003 17 +   2252614 ACCAATTa-------a-t-----g-gggttt
i Rhinolophus_sinicus.LVEH01000179.1                    I 4 I 23
s Rhinopithecus_bieti.k119_102124                           12616 13 -     14454 GTCTAGCT-------A-T-----T-G----C
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206373942 13 - 206558726 gtctagcT-------A-T-----T-G----C
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44851590 13 -  45163003 GTCTAGCT-------A-T-----T-G----C
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                16710 13 +    109198 GACAATTA-------A-T-----T-G----T
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            I 4 I 6
s Saiga_tatarica.SaiTat_scaffold_82192                       5006 13 +     12214 ACCAATTA-------A-T-----C-A----T
i Saiga_tatarica.SaiTat_scaffold_82192                  I 4 I 6
s Saimiri_boliviensis.NW_024100938.1                     15669557 13 -  43202129 GTCAAGCT-------A-T-----T-G----C
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        1423 13 +     34089 GTCAAGCT-------A-T-----T-G----C
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              1366 13 -     60842 GTCAAGCT-------A-T-----T-G----C
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              1443 13 +     67014 GTCAAGCT-------A-T-----T-G----C
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              1439 13 +     60816 GTCAAGCT-------A-T-----T-G----C
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 1376 13 -     76454 GTCAAGCT-------A-T-----T-G----C
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17337900 13 -  30362882 GTCAAGCT-------A-T-----T-G----C
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         17500 13 -     62485 GTCAAGCT-------A-T-----T-G----C
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   28765  8 -    114521 C-----CA-------A-T-----T-A----A
i Scalopus_aquaticus.ScaAqu_scaffold_9300               I 5 I 4
s Semnopithecus_entellus.k141_1527475                       24604 13 +     26421 GTCTAGCT-------G-T-----T-G----C
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       5064 13 +     20762 GTCTAGCT-------A-T-----T-G----C
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         38799 13 +     40653 GTCTAGCT-------A-T-----T-G----C
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                            9356 13 -     12194 GTCTAGCT-------A-T-----T-G----C
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     22778 13 -     27512 GTCTAGCT-------A-T-----T-G----C
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         31797 13 -     33692 GTCTAGCT-------A-T-----T-G----C
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   96372 13 -    120886 GCCAATTC-------A-T-----T-A----T
i Sigmodon_hispidus.SigHis_scaffold_11332               I 5 I 2
s Solenodon_paradoxus.SolPar_flattened_line_1012            15277 13 +    739146 ATCAATTA-------A-T-----T-G----T
i Solenodon_paradoxus.SolPar_flattened_line_1012        I 5 I 5
s Sorex_araneus.JH798170.1                               17747656 13 -  27805282 ATCAAttt-------g-t-----t-g----t
i Sorex_araneus.JH798170.1                              I 5 I 3
s Spermophilus_dauricus.KZ294190.1                        2236948 11 +   2842873 ATcaagtt-------a-a-----t-------
i Spermophilus_dauricus.KZ294190.1                      C 0 I 4
s Spilogale_gracilis.SpiGra_flattened_line_905             231813 13 -    276980 GCCAATTA-------A-T-----T-G----T
i Spilogale_gracilis.SpiGra_flattened_line_905          I 5 I 7
s Suricata_suricatta.SurSur_flattened_line_20339            24383 13 +     62062 GCCAATTA-------A-T-----T-G----T
i Suricata_suricatta.SurSur_flattened_line_20339        I 5 I 5
s Sus_scrofa.CM000824.4                                 189269287 12 + 218635234 GTCAATTA-------A-C-----C-A-----
i Sus_scrofa.CM000824.4                                 I 4 I 6
s Symphalangus_syndactylus.tarseq_24                     13898761 13 +  13920577 GTCAAGCT-------A-T-----T-G----T
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               3227 13 -      6213 GCCAATTA-------A-T-----T-G----T
i Tadarida_brasiliensis.TadBra_scaffold_145589          I 3 I 9
s Tamandua_tetradactyla.TamTet_scaffold_26877               12159 13 +     45698 CCTAATAC-------A-T-----T-G----T
i Tamandua_tetradactyla.TamTet_scaffold_26877           I 11 I 4
s Tapirus_indicus.TapInd_scaffold_176                      804165  4 +   1148477 -----------------T-----T-G----T
i Tapirus_indicus.TapInd_scaffold_176                   I 10 I 5
s Tapirus_terrestris.TapTer_scaffold_14939                  54825  4 +     99546 -----------------T-----T-G----T
i Tapirus_terrestris.TapTer_scaffold_14939              I 10 I 5
s Tarsius_lariang.k141_609102                               23494 12 +     42269 GTCAA-GC-------A-A-----T-T----G
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               56810 12 +     65473 GTCAA-GC-------A-A-----T-T----G
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194004099 13 - 194193292 gtctagCT-------A-T-----T-G----C
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  1004 13 +      6782 CCTAATTC-------C-T-----A-G----T
i Tolypeutes_matacus.TolMat_scaffold_269431             I 4 I 3
s Tonatia_saurophila.TonSau_scaffold_3334                  133294 13 -    259118 GCCAATTA-------A-T-----T-G----C
i Tonatia_saurophila.TonSau_scaffold_3334               I 4 I 5
s Trachypithecus_auratus.k141_738098                        23174 13 +     38948 GTCTAGCT-------A-T-----T-G----C
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   16901 13 -     32910 GTCTAGCT-------A-T-----T-G----C
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       22799 13 +     24652 GTCTAGCT-------A-T-----T-G----C
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      1677 13 -      3559 GTCTAGCT-------A-T-----T-G----C
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           39623 13 -     54611 GTCTAGCT-------A-T-----T-G----C
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       15622 13 +     17312 GTCTAGCT-------A-T-----T-G----C
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    22985 13 -     25040 GTCTAGCT-------A-T-----T-G----C
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          1651 13 +      3528 GTCTAGCT-------A-T-----T-G----C
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  48013 13 +     51589 GTCTAGCT-------A-T-----T-G----C
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       11189 13 +     14732 GTCTAGCT-------A-T-----T-G----C
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       1666 13 -     28054 GTCTAGCT-------A-T-----T-G----C
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44656461 13 -  44834318 GTCTAGCT-------A-T-----T-G----C
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        1471 13 +      3372 GTCTAGCT-------A-T-----T-G----C
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   2639 13 +     90398 ACCAATTA-------A-T-----C-A----T
i Tragulus_javanicus.TraJav_scaffold_14717              I 4 I 7
s Trichechus_manatus.JH594618.1                          16078747 13 +  31416278 Cccaattt-------t-t-----t-g----t
i Trichechus_manatus.JH594618.1                         I 5 I 4
s Tupaia_chinensis.KB320831.1                             2788592 13 -   3938065 gccaaatt-------a-t-----t-g----t
i Tupaia_chinensis.KB320831.1                           I 2 I 3
s Tupaia_tana.TupTan_flattened_line_68454                    1130 13 +     13056 GCCAAATT-------A-T-----T-G----T
i Tupaia_tana.TupTan_flattened_line_68454               I 2 I 3
s Tursiops_truncatus.MRVK01000923.1                      69310783 13 -  96451834 ACCAACTG-------A-C-----c-a----t
i Tursiops_truncatus.MRVK01000923.1                     I 4 I 7
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 23960  8 -     25548 C-----CA-------A-C-----T-G----T
i Uropsilus_gracilis.UroGra_scaffold_4143_0             I 5 I 4
s Ursus_maritimus.KK498671.1                              6511400 13 +  28682327 Gccaaata-------a-t-----t-g----t
i Ursus_maritimus.KK498671.1                            I 5 I 6
s Varecia_rubra.k141_432109                                  2230 19 -     20643 acaaagtc-------atttttttt-t----t
i Varecia_rubra.k141_432109                             I 3 C 0
s Varecia_variegata.k141_775891                             21776  9 -     33872 acaaagtc-------a---------------
i Varecia_variegata.k141_775891                         I 3 I 8
s Vicugna_pacos.KN269600.1                                1522092 13 -   2331223 gccaatta-------a-c-----c-t----t
i Vicugna_pacos.KN269600.1                              I 4 I 5
s Vulpes_lagopus.VulLag_flattened_line_2045                134548 13 -    281493 GCCAACTA-------A-T-----T-G----T
i Vulpes_lagopus.VulLag_flattened_line_2045             I 5 I 7
s Xerus_inauris.XerIna_scaffold_7898                       124051 11 -    134049 ATCAGGTC-------A-T-----T-------
i Xerus_inauris.XerIna_scaffold_7898                    C 0 I 4
s Zalophus_californianus.ZalCal_flattened_line_4097        211075 13 -    227762 GCCAATTA-------G-T-----T-G----T
i Zalophus_californianus.ZalCal_flattened_line_4097     I 5 I 7
s Zapus_hudsonius.ZapHud_scaffold_64392                     12285 13 -     20485 GCAAAATT-------A-T-----T-G----T
i Zapus_hudsonius.ZapHud_scaffold_64392                 I 2 I 2
s Ziphius_cavirostris.ZipCav_flattened_line_127025           4286 13 -      8775 ACCAATTG-------A-C-----C-A----T
i Ziphius_cavirostris.ZipCav_flattened_line_127025      I 4 I 6
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            93631  8 +    112873 I
e Myotis_myotis.MyoMyo_scaffold_6123                         7641  0 +     66751 C
e Myotis_lucifugus.GL429887.1                             3462452  0 -   3747815 C
e Myotis_davidii.KB114863.1                               5016535  6 +   6462685 I
e Myotis_brandtii.KE161952.1                               964866  0 +   8389877 C
e Murina_feae.MurFea_scaffold_2254                          16540  0 -    100666 C
e Lasiurus_borealis.LasBor_scaffold_5102                   111019  7 -    115756 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16291  1 -    119109 I
e Octodon_degus.JH651621.1                                3678743 1836 +  10294119 I
e Myocastor_coypus.MyoCoy_scaffold_3653                     87101  0 -    117718 C
e Heterocephalus_glaber.JH602058.1                        2548028 229 +  31725842 I
e Fukomys_damarensis.KN123630.1                          13889876  0 -  19261668 C
e Dolichotis_patagonum.DolPat_scaffold_14102                33375  0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             56104 16 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                14631 16 +     26546 I
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 27476  0 -     67205 C
e Cavia_tschudii.CavTsc_scaffold_488                       173989  0 +    436027 C
e Cavia_porcellus.DS562889.1                             15795798  0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15783848 16 -  24422027 I
e Capromys_pilorides.CapPil_scaffold_647363                  1402  3 +      1887 I

a score=0.000000
s hg38.chr4_GL000008v2_random                                8734  6 +    209709 A-----------------T-----A---T----------T--------T
s Acinonyx_jubatus.LLWD01000356.1                         2030810  2 +   3721120 ---------------------------------------a--------t
i Acinonyx_jubatus.LLWD01000356.1                       I 5 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    109086  7 -    189883 T-----------------T----TT---T----------T--------A
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 2 I 2
s Ailuropoda_melanoleuca.LNAT01000321.1                  10654145  4 +  23371972 ------------------------t---t----------t--------t
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 6 C 0
s Ailurus_fulgens.LNAC01000003.1                          7090850 31 -  16596857 ttttgtttgtttgtttttt-----g---tt--ttgttttg--------t
i Ailurus_fulgens.LNAC01000003.1                        I 8 C 0
s Allactaga_bullata.AllBul_scaffold_70162                    8928  6 -     22067 T-----------------T-----C---T----------T--------A
i Allactaga_bullata.AllBul_scaffold_70162               I 2 I 2
s Allenopithecus_nigroviridis.k141_3103707                  59748  6 +     61638 A-----------------T-----A---T----------T--------T
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        51556  6 +     53391 A-----------------T-----A---T----------T--------T
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         2280  6 +     72529 A-----------------T-----A---T----------T--------T
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          1856  6 +      3797 A-----------------T-----A---T----------T--------T
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             7034  6 -     18050 A-----------------A-----A---T----------G--------T
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  8150  6 -     11521 A-----------------A-----A---T----------G--------T
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              7711  6 -     21359 A-----------------A-----A---T----------G--------T
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1856473                                6093  6 +      7227 A-----------------A-----A---T----------G--------T
i Alouatta_juara.k141_1856473                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          7007  6 -     10438 A-----------------A-----A---T----------G--------T
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            3662  6 +      7047 A-----------------A-----A---T----------G--------T
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             6949  6 +     10410 A-----------------A-----A---T----------G--------T
i Alouatta_palliata.k141_1316127                        C 0 I 4
s Alouatta_puruensis.k141_1284840                             747  6 -      4927 A-----------------A-----A---T----------G--------T
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             3680  6 +      6429 A-----------------A-----A---T----------G--------T
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3517566  1 +   4113121 ----------------------------t--------------------
i Ammotragus_lervia.NIVO01013474.1                      I 6 I 4
s Antilocapra_americana.AntAmePen_scaffold_42841            28199  1 +     33004 ----------------------------T--------------------
i Antilocapra_americana.AntAmePen_scaffold_42841        I 6 I 4
s Anoura_caudifer.AnoCau_scaffold_422                      387760  6 -    631301 T--------------TAGT-----C------------------------
i Anoura_caudifer.AnoCau_scaffold_422                   I 5 I 3
s Aotus_azarae.k141_3170768                                 59394  6 +     78111 G-----------------A-----A---T----------A--------T
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            2324  6 +     22701 G-----------------A-----A---T----------G--------T
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5746282  6 +   9889416 G-----------------A-----A---T----------G--------T
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             2863  6 -    104377 G-----------------A-----A---T----------G--------T
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               2872  6 +     23246 G-----------------A-----A---T----------G--------T
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                      922  6 +      5067 A-----------------T-----T---T----------T--------A
i Aplodontia_rufa.AprRuf_scaffold_156013                I 4 I 2
s Arctocebus_calabarensis.k141_1161114                      14873  2 +     17483 T-----------------T------------------------------
i Arctocebus_calabarensis.k141_1161114                  C 0 I 2
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 5902  6 -     29036 T--------------TAGT-----C------------------------
i Artibeus_jamaicensis.ArtJam_scaffold_41619            I 5 I 3
s Ateles_geoffroyi_b.tarseq_2582                             9536135  6 +  39197703 A-----------------A-----A---T----------G--------T
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             57419  6 +     85812 A-----------------A-----A---T----------G--------T
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 8418  6 +     89302 A-----------------A-----A---T----------G--------T
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             12928  6 -     58268 A-----------------A-----A---T----------G--------T
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             60914  6 +    119057 A-----------------A-----A---T----------G--------T
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               2865  6 -     25888 A-----------------A-----A---T----------G--------T
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 3619  1 -     16375 ----------------------------T--------------------
i Avahi_laniger.k141_2840928                            C 0 I 9
s Balaenoptera_acutorostrata.KI537095.1                  26377521  1 +  51448160 ----------------------------t--------------------
i Balaenoptera_acutorostrata.KI537095.1                 I 7 I 2
s Balaenoptera_bonaerensis.DF502048.1                        2752  1 -     13118 ----------------------------t--------------------
i Balaenoptera_bonaerensis.DF502048.1                   I 7 I 2
s Beatragus_hunteri.BeaHun_scaffold_21644                   40666  1 -     72089 ----------------------------T--------------------
i Beatragus_hunteri.BeaHun_scaffold_21644               I 6 I 4
s Bison_bison.KN264915.1                                  6556810  1 +   6870073 ----------------------------t--------------------
i Bison_bison.KN264915.1                                I 6 I 4
s Bos_indicus.CM003021.1                                138137045  1 - 161108492 ----------------------------t--------------------
i Bos_indicus.CM003021.1                                I 6 I 4
s Bos_mutus.JH883513.1                                     569422  1 -    998990 ----------------------------t--------------------
i Bos_mutus.JH883513.1                                  I 6 I 4
s Bos_taurus.CM000177.6                                 136292778  1 - 158972876 ----------------------------t--------------------
i Bos_taurus.CM000177.6                                 I 6 I 4
s Bubalus_bubalis.KI419065.1                              1228398  1 -   1914593 ----------------------------t--------------------
i Bubalus_bubalis.KI419065.1                            I 6 I 4
s Cacajao_ayresi.k141_724503                               110769  5 -    171031 A-----------------A-----A---T----------G---------
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                  9795  5 +    125063 A-----------------A-----A---T----------G---------
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                11843  5 -    216513 A-----------------A-----A---T----------G---------
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        4383  5 -    134917 A-----------------A-----A---T----------G---------
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3217029  9 -   8989139 ttt--------------agtg---t---t--------------------
i Camelus_bactrianus.KN276303.1                         I 5 I 2
s Camelus_dromedarius.KN271192.1                           394730 12 -  15254737 ttt--------------agtggttt---t--------------------
i Camelus_dromedarius.KN271192.1                        I 5 I 2
s Camelus_ferus.KB016973.1                                2970467  9 +   6889770 ttt--------------agtg---t---t--------------------
i Camelus_ferus.KB016973.1                              I 5 I 2
s CanFam4.chr31                                          11515523  9 +  39901454 A--------------TGTT-----T---T----------T--------A
i CanFam4.chr31                                         I 7 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   10540  9 +     87036 A--------------TGTT-----T---T----------T--------A
i Canis_lupus_VD.CanFam_VD_scaffold_16982               I 7 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11262182  9 -  35597290 at--gt------------t-----t---t----------t--------a
i Canis_lupus_dingo.QKWQ01001993.1                      I 7 C 0
s Canis_lupus_familiaris.chr31                           11084711  9 +  39895921 at--gt------------t-----t---t----------t--------a
i Canis_lupus_familiaris.chr31                          I 7 C 0
s Canis_lupus_orion.HG994411.1                           16451745  9 -  44759192 at--gt------------t-----t---t----------t--------a
i Canis_lupus_orion.HG994411.1                          I 7 C 0
s Capra_aegagrus.CM003214.1                              21322673  1 + 157394656 ----------------------------t--------------------
i Capra_aegagrus.CM003214.1                             I 6 I 6
s Capra_hircus.CM004562.1                               135703900  1 - 157403528 ----------------------------t--------------------
i Capra_hircus.CM004562.1                               I 6 I 6
s Capromys_pilorides.CapPil_scaffold_647363                  1405  5 +      1887 ------------------------A---A----------T-------GA
i Capromys_pilorides.CapPil_scaffold_647363             I 3 I 4
s Carlito_syrichta.NW_007248099.1                          306025  6 +    345090 T-----------------G-----G---T----------T--------A
i Carlito_syrichta.NW_007248099.1                       C 0 I 2
s Castor_canadensis.CasCan_scaffold_47037                   27432  2 +     33760 ---------------------------------------T--------C
i Castor_canadensis.CasCan_scaffold_47037               I 1 I 2
s Catagonus_wagneri.CatWag_scaffold_1305                   156238  1 -    276539 ----------------------------A--------------------
i Catagonus_wagneri.CatWag_scaffold_1305                I 6 I 2
s Carollia_perspicillata.CarPer_scaffold_4436               56941  6 +     67245 C--------------TGGT-----C------------------------
i Carollia_perspicillata.CarPer_scaffold_4436           I 5 I 3
s Cebus_albifrons.Contig22                               18887610  6 -  29618158 A-----------------A-----A---T----------G--------T
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 5154  6 -     26817 A-----------------A-----A---T----------G--------T
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                 9397  6 +     25043 A-----------------A-----A---T----------G--------T
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         5062  6 +     21754 T-----------------G-----G---T----------T--------A
i Cephalopachus_bancanus.k141_702587                    C 0 I 2
s Ceratotherium_simum.JH767818.1                          4360735  8 +   7569818 T--------------TGAG-----T---T----------T---------
i Ceratotherium_simum.JH767818.1                        I 5 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623          490  8 -      9338 T--------------TGAG-----T---T----------T---------
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    I 5 C 0
s Cercocebus_atys.KQ010443.1                              6551544  6 +   6739814 A-----------------T-----A---C----------T--------T
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      53021  6 -     54931 A-----------------T-----A---C----------T--------T
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         18005  6 -     19697 A-----------------T-----A---C----------T--------T
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         55536  6 -    107033 A-----------------T-----A---C----------T--------T
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        1977  6 -      3853 A-----------------T-----A---C----------T--------T
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          25910  6 +     30494 A-----------------T-----A---C----------T--------T
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           1934  6 -      4022 A-----------------T-----A---T----------T--------T
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          1827  6 -      3505 A-----------------T-----A---T----------T--------T
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           20631  6 +     35983 A-----------------T-----A---T----------T--------T
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11987153  6 +  12117833 A-----------------T-----A---C----------T--------T
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46473906  6 +  46592721 A-----------------T-----A---T----------T--------T
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      31733  6 +     33420 A-----------------T-----A---T----------T--------T
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        1769  6 -      3443 A-----------------T-----A---C----------T--------T
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      2760  6 -      4669 A-----------------T-----A---T----------T--------T
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        2560  6 -      4411 A-----------------T-----A---T----------T--------T
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         2085  6 -      4205 A-----------------T-----A---T----------T--------T
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_1070855           301  5 -      1715 ------------------T-----T---T----------T--------A
i Chaetophractus_vellerosus.ChaVel_scaffold_1070855     I 3 I 2
s Cheirogaleus_major.k141_1157592                           55926  7 -     68416 ---------------------------------------T---TTTTAG
i Cheirogaleus_major.k141_1157592                       C 0 I 1
s Cheirogaleus_medius.k141_133808                            4972  7 +     13308 ---------------------------------------T---TTTTAG
i Cheirogaleus_medius.k141_133808                       C 0 I 1
s Cheracebus_lucifer.k141_619653                             2412  5 -     18223 C-----------------A-----A---T----------G---------
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             19435  5 +     25473 C-----------------A-----A---T----------G---------
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           38474  5 +     57117 C-----------------A-----A---T----------G---------
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          43149  5 +     54541 C-----------------A-----A---T----------G---------
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15958805  6 +  43084221 a-----------------t-----a---a----------t--------a
i Chinchilla_lanigera.JH721867.1                        I 5 I 4
s Chiropotes_israelita.k141_1189915                         67990  5 +    196370 A-----------------A-----A---T----------G---------
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          12171  5 +     40510 A-----------------A-----A---T----------G---------
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15135366  6 -  15256731 A-----------------T-----A---T----------T--------C
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      30412  6 -     53260 A-----------------T-----A---T----------T--------C
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101140861  6 + 101219884 A-----------------T-----A---T----------T--------C
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                13922  5 -     21363 ------------------T-----T---T----------T--------A
i Choloepus_didactylus.ChoDid_scaffold_36182            I 4 I 2
s Choloepus_hoffmanni.KN194586.1                           759228  5 +    964067 ------------------T-----T---T----------T--------A
i Choloepus_hoffmanni.KN194586.1                        I 4 I 2
s Chrysochloris_asiatica.ChrAsi_scaffold_141308              6016  5 -     12508 ------------------T-----T---T----------T--------C
i Chrysochloris_asiatica.ChrAsi_scaffold_141308         I 3 I 3
s Colobus_angolensis.KN985967.1                          10879440  6 +  10971483 A-----------------A-----A---T----------T--------T
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147660598  6 + 156195979 A-----------------A-----A---T----------T--------T
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            12585  6 +     23629 A-----------------A-----A---T----------T--------T
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60610185  5 +  78930452 ------------------A-----G---T----------T--------C
i Condylura_cristata.JH655880.1                         I 6 I 2
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         36639  6 -     40477 T--------------AAGT-----T------------------------
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     I 4 I 1
s Cricetomys_gambianus.CriGam_scaffold_949                 274523  6 -    399297 A-----------------T-----T---T----------T--------A
i Cricetomys_gambianus.CriGam_scaffold_949              I 2 I 2
s Cricetulus_griseus.LT883672.1                          53025710  6 +  72327488 T-----------------T-----T---T----------T--------A
i Cricetulus_griseus.LT883672.1                         I 2 I 2
s Crocidura_indochinensis.CroInd_scaffold_38409             16151  9 -     19186 T--------------TCTC-----T---T----------T--------T
i Crocidura_indochinensis.CroInd_scaffold_38409         I 8 I 813
s Cryptoprocta_ferox.CryFer_flattened_line_19014            48837  5 -     70449 ------------------C-----T---T----------T--------T
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 5 I 5
s Ctenodactylus_gundi.CteGun_scaffold_447                  205277  4 -    956709 A-----------------A-----C---A--------------------
i Ctenodactylus_gundi.CteGun_scaffold_447               I 9 C 0
s Dasypus_novemcinctus.JH568778.1                          179110  5 -   6883506 ------------------t-----t---t----------t--------a
i Dasypus_novemcinctus.JH568778.1                       I 3 I 2
s Daubentonia_madagascariensis.ctg11                     16841795  6 +  31942871 T-----------------T-----T---T----------T--------G
i Daubentonia_madagascariensis.ctg11                    C 0 I 1
s Delphinapterus_leucas.KZ290064.1                       80034267  1 -  96802777 ----------------------------t--------------------
i Delphinapterus_leucas.KZ290064.1                      I 7 I 2
s Desmodus_rotundus.KZ672188.1                           18696254  6 -  18957592 tt-ag-------------t-----c------------------------
i Desmodus_rotundus.KZ672188.1                          I 5 I 3
s Dicerorhinus_sumatrensis.PEKH010003161.1                 319397  8 +    993696 T--------------TGAG-----T---T----------T---------
i Dicerorhinus_sumatrensis.PEKH010003161.1              I 5 C 0
s Diceros_bicornis.DicBicMic_scaffold_170113                  655  8 +       818 T--------------TGAG-----T---T----------T---------
i Diceros_bicornis.DicBicMic_scaffold_170113            I 5 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   154670  6 +    228994 A-----------------C-----T---A----------T--------A
i Dinomys_branickii.DinBra_scaffold_1996                I 5 I 4
s Dipodomys_ordii.KN672545.1                              3652423  2 +   4240102 ---------------------------------------T--------C
i Dipodomys_ordii.KN672545.1                            I 5 I 2
s Dipodomys_stephensi.DipSte_scaffold_44365                 23977  2 +     28912 ---------------------------------------T--------C
i Dipodomys_stephensi.DipSte_scaffold_44365             I 5 I 2
s Echinops_telfairi.JH980316.1                           22991512  2 -  44670279 ---------------------------------------t--------C
i Echinops_telfairi.JH980316.1                          I 6 I 3
s Elaphurus_davidianus.JRFZ01086400.1                     1488924  1 +   1727528 ----------------------------t--------------------
i Elaphurus_davidianus.JRFZ01086400.1                   I 6 I 4
s Eidolon_helvum.KE772537.1                                  9630  6 +     24177 tt-cg-------------T-----T------------------------
i Eidolon_helvum.KE772537.1                             I 6 I 1
s Elephantulus_edwardii.JH947210.1                        7803711  4 +  15467074 ------------------t-----c---t----------t---------
i Elephantulus_edwardii.JH947210.1                      I 13 I 1
s Ellobius_lutescens.LOEQ01003611.1                        236178  6 -    369425 t-----------------t-----t---t----------a--------a
i Ellobius_lutescens.LOEQ01003611.1                     I 2 C 0
s Ellobius_talpinus.LOJH01090055.1                           3186  6 -      7838 t-----------------t-----t---t----------g--------a
i Ellobius_talpinus.LOJH01090055.1                      I 2 C 0
s Enhydra_lutris.KZ291749.1                              85868571 31 +  99434291 tttggttt-tttggttt-g-----g---ttggtttttttt--------t
i Enhydra_lutris.KZ291749.1                             I 7 C 0
s Equus_asinus.JREZ01000062.1                             5850117  8 -   7175178 T--------------TGAG-----T---T----------T---------
i Equus_asinus.JREZ01000062.1                           I 5 C 0
s Equus_caballus.CM000402.2                              13348620  8 +  41866177 T--------------TGAG-----T---T----------T---------
i Equus_caballus.CM000402.2                             I 5 C 0
s Equus_przewalskii.ATBW01073585.1                          10110  8 +     92910 T--------------TGAG-----T---T----------T---------
i Equus_przewalskii.ATBW01073585.1                      I 5 C 0
s Erinaceus_europaeus.JH835290.1                         11529707 11 +  16010500 G------------GTTTGG-----G---T----------T--------C
i Erinaceus_europaeus.JH835290.1                        I 7 I 2
s Erythrocebus_patas.Contig8                             48767545  6 -  48907691 A-----------------T-----A---T----------T--------C
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eulemur_albifrons.k141_715837                              1989  2 +     13586 ---------------------------------------G--------G
i Eulemur_albifrons.k141_715837                         I 1 I 1
s Eulemur_collaris.k141_311830                               1923  2 -      6809 ---------------------------------------G--------G
i Eulemur_collaris.k141_311830                          I 1 I 1
s Eulemur_coronatus.k141_3240342                             8397  2 +     36558 ---------------------------------------G--------G
i Eulemur_coronatus.k141_3240342                        I 1 I 1
s Eulemur_flavifrons.k141_903901                             4712  2 +     60246 ---------------------------------------G--------G
i Eulemur_flavifrons.k141_903901                        I 1 I 1
s Eulemur_fulvus.k141_653297                                 8201  2 +    109717 ---------------------------------------G--------G
i Eulemur_fulvus.k141_653297                            I 1 I 1
s Eulemur_macaco.k141_1341545                               12574  2 +     16540 ---------------------------------------G--------G
i Eulemur_macaco.k141_1341545                           I 1 I 1
s Eulemur_mongoz.k141_825972                                12851  2 +     27497 ---------------------------------------G--------G
i Eulemur_mongoz.k141_825972                            I 1 I 1
s Eulemur_rubriventer.k141_411740                           15313  2 +     26808 ---------------------------------------G--------G
i Eulemur_rubriventer.k141_411740                       I 1 I 1
s Eulemur_rufus.k141_1620292                                30041  2 +     46535 ---------------------------------------G--------G
i Eulemur_rufus.k141_1620292                            I 1 I 1
s Eulemur_sanfordi.k141_186399                              12764  2 -     29447 ---------------------------------------G--------G
i Eulemur_sanfordi.k141_186399                          I 1 I 1
s Felis_catus.CM001386.2                                129889790  2 - 159252932 ---------------------------------------a--------t
i Felis_catus.CM001386.2                                I 5 I 7
s Felis_catus_fca126.CM031420.1                         129276864  2 - 158578461 ---------------------------------------a--------t
i Felis_catus_fca126.CM031420.1                         I 5 I 7
s Felis_nigripes.FelNig_flattened_line_8080                 17999  2 +     52776 ---------------------------------------A--------T
i Felis_nigripes.FelNig_flattened_line_8080             I 5 I 7
s Eschrichtius_robustus.EscRob_flattened_line_685          312405  1 +    330699 ----------------------------T--------------------
i Eschrichtius_robustus.EscRob_flattened_line_685       I 7 I 2
s Eubalaena_japonica.EubJap_flattened_line_7756             58834  1 +     89355 ----------------------------T--------------------
i Eubalaena_japonica.EubJap_flattened_line_7756         I 7 I 2
s Galago_moholi.ctg555                                     207948  3 -    847004 ----------------------------T----------A--------G
i Galago_moholi.ctg555                                  I 2 C 0
s Galago_senegalensis.k141_964197                           10328  3 -     43889 ----------------------------T----------A--------G
i Galago_senegalensis.k141_964197                       I 2 C 0
s Galagoides_demidoff.k141_1769638                           7375  6 +     27357 T-----------------T-----T---T----------A--------G
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               153250  6 +    324696 T-----------------T-----T---T----------T--------G
i Galeopterus_variegatus.GalVar_scaffold_354            I 3 I 2
s Giraffa_tippelskirchi.LVKQ01S012154.1                    178449  1 -    189561 ----------------------------T--------------------
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 6 I 4
s Glis_glis.GliGli_scaffold_79770                            9647  6 -     18683 T-----------------T-----T---T----------T--------A
i Glis_glis.GliGli_scaffold_79770                       I 5 I 2
s Gorilla_beringei.k141_111300                               2135  6 -     14630 A-----------------T-----A---T----------T--------T
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119649234  6 - 195582420 a-----------------t-----a---t----------t--------t
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   74198  6 +    118900 A-----------------T-----T---T----------T--------T
i Graphiurus_murinus.GraMur_scaffold_4493               I 5 I 2
s Hapalemur_alaotrensis.k141_1198205                         2547 10 +      3980 T-----------------T-----T---T------TTTTA--------G
i Hapalemur_alaotrensis.k141_1198205                    C 0 I 1
s Hapalemur_gilberti.k141_97962                             25022 10 +     26611 T-----------------T-----T---T------TTTTA--------G
i Hapalemur_gilberti.k141_97962                         C 0 I 1
s Hapalemur_griseus.k141_1387522                             2480 13 +     56096 T-----------------T-----TTTTT------TTTTA--------G
i Hapalemur_griseus.k141_1387522                        C 0 I 1
s Hapalemur_meridionalis.k141_186231                        25755 13 -     42470 t-----------------t-----tttttt--ttt----a--------g
i Hapalemur_meridionalis.k141_186231                    C 0 I 1
s Hapalemur_occidentalis.k141_797938                        42350 13 -     54384 t-----------------t-----t---tt--tttttt-a--------g
i Hapalemur_occidentalis.k141_797938                    C 0 I 1
s Helogale_parvula.HelPar_flattened_line_22962              14044  5 +     53719 ------------------C-----T---T----------T--------T
i Helogale_parvula.HelPar_flattened_line_22962          I 5 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                24935  1 -     91191 ----------------------------T--------------------
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 6 I 4
s Heterohyrax_brucei.HetBruBak_scaffold_25354               53526  3 +     73687 ----------------------------C----------T--------C
i Heterohyrax_brucei.HetBruBak_scaffold_25354           I 6 I 3
s Hippopotamus_amphibius.HipAmp_scaffold_1308              144517  1 +    277961 ----------------------------T--------------------
i Hippopotamus_amphibius.HipAmp_scaffold_1308           I 8 I 2
s Hipposideros_armiger.JXIK01001085.1                      275950  6 -    477199 g-aag-------------t-----t------------------------
i Hipposideros_armiger.JXIK01001085.1                   I 21 I 1
s Hipposideros_galeritus.HipGal_scaffold_104691              5108  6 -      9143 T--------------AAGT-----T------------------------
i Hipposideros_galeritus.HipGal_scaffold_104691         I 23 I 1
s Hoolock_leuconedys.ctg79                                        17  6 -   7690867 A-----------------T-----A---T----------T--------T
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 13110  5 -     67322 ------------------C-----T---T----------T--------T
i Hyaena_hyaena.HyaHya_flattened_line_20729             I 5 C 0
s Hylobates_abbotti.k141_493872                              1940  6 +      5897 A-----------------T-----A---T----------T--------T
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_282275                               1153  6 +      1846 A-----------------T-----A---T----------T--------T
i Hylobates_agilis.k141_282275                          C 0 C 0
s Hylobates_klossii.k141_584463                               317  6 -      1009 A-----------------T-----A---T----------T--------T
i Hylobates_klossii.k141_584463                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14621486  6 -  25970782 A-----------------T-----A---T----------T--------T
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1133650                            1375  6 -      2775 A-----------------T-----A---T----------T--------T
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             29978  6 -     60944 A-----------------T-----A---T----------T--------T
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     3155  6 +     22540 G-----------------T-----T---A----------A--------A
i Hystrix_cristata.HysCri_scaffold_50788                I 5 I 2
s Ictidomys_tridecemlineatus.JH393315.1                   7123043  6 +  13083262 a-----------------t-----t---t----------t--------a
i Ictidomys_tridecemlineatus.JH393315.1                 I 4 I 2
s Indri_indri.k141_1884019                                    208 16 -      2196 t-----------------t-----t---tt--t---aggtttttt---t
i Indri_indri.k141_1884019                              C 0 I 1
s Inia_geoffrensis.IniGeo_flattened_line_66725               6193  1 +     17520 ----------------------------T--------------------
i Inia_geoffrensis.IniGeo_flattened_line_66725          I 7 I 2
s Jaculus_jaculus.JH725517.1                              8561890  6 +  11848649 T-----------------G-----C---t----------t--------a
i Jaculus_jaculus.JH725517.1                            I 2 I 2
s Kogia_breviceps.KogBre_flattened_line_35920               21027  1 +     37189 ----------------------------T--------------------
i Kogia_breviceps.KogBre_flattened_line_35920           I 7 I 1
s Lagothrix_lagothricha.k141_12968                          46988  6 -    147782 A-----------------A-----A---T----------G--------T
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lemur_catta.scaffold_1                                258404030 11 - 285822530 T-----------------T-----T---T-----TTTTTA--------G
i Lemur_catta.scaffold_1                                C 0 I 1
s Lepilemur_ankaranensis.k141_884009                        20917  9 +     39228 ---------------------------------------T-TTTTTTAG
i Lepilemur_ankaranensis.k141_884009                    C 0 I 1
s Lepilemur_dorsalis.k141_134267                            50291  8 +     63517 ---------------------------------------T--TTTTTAG
i Lepilemur_dorsalis.k141_134267                        C 0 I 1
s Lepilemur_ruficaudatus.k141_617879                        75514  6 +    116806 ---------------------------------------T----TTTAG
i Lepilemur_ruficaudatus.k141_617879                    C 0 I 1
s Lepilemur_septentrionalis.k141_578524                     28554 10 -     33031 ---------------------------------------ttttttttag
i Lepilemur_septentrionalis.k141_578524                 C 0 I 1
s Leptonychotes_weddellii.KB714749.1                      3082813  7 -   3498232 g---gttt----------t-----t------------------------
i Leptonychotes_weddellii.KB714749.1                    I 7 I 1
s Lepus_americanus.LepAme_scaffold_62849                    10015  4 +     22452 C-----------------T-----T---T--------------------
i Lepus_americanus.LepAme_scaffold_62849                I 5 I 2
s Lipotes_vexillifer.KE558548.1                            133369  1 +   3060487 ----------------------------t--------------------
i Lipotes_vexillifer.KE558548.1                         I 7 I 2
s Lophocebus_aterrimus.ctg55                             19244632  6 +  19376315 A-----------------T-----A---C----------T--------T
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            7677  2 +     84689 T-----------------T------------------------------
i Loris_lydekkerianus.k141_550999                       C 0 I 2
s Loris_tardigradus.ctg97                                 3775428  2 +   6799190 T-----------------T------------------------------
i Loris_tardigradus.ctg97                               C 0 I 2
s Loxodonta_africana.GL010040.1                          20588284  5 -  62548349 ------------------t-----t---t----------t--------c
i Loxodonta_africana.GL010040.1                         I 3 I 3
s Lycaon_pictus.CM007556.1                               11084167  9 +  39895028 at--gt------------t-----t---t----------t--------a
i Lycaon_pictus.CM007556.1                              I 7 C 0
s Macaca_arctoides.k141_2201161                             16315  6 +     74745 A-----------------T-----A---T----------T--------T
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12702821  6 +  12821369 A-----------------T-----A---T----------T--------T
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               4917  6 +      6569 A-----------------T-----A---T----------T--------T
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           43219  6 +     63263 A-----------------T-----A---T----------T--------T
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_1068107                               11795  6 +     12679 A-----------------T-----A---T----------T--------T
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                1368  6 +      3017 A-----------------T-----A---T----------T--------T
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  42980  6 -     79256 A-----------------T-----A---T----------T--------T
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196031898  6 + 196197964 A-----------------T-----A---T----------T--------T
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11442004  6 +  11645122 A-----------------T-----A---T----------T--------T
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   1927  6 -     46448 A-----------------T-----A---T----------T--------T
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                1758  6 -      3617 A-----------------T-----A---T----------T--------T
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 12090  6 -     55006 A-----------------T-----A---T----------T--------T
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43837127  6 +  43892939 A-----------------T-----A---T----------T--------T
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                4349  6 -      5978 A-----------------T-----A---T----------T--------T
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               1932  6 -     27140 A-----------------T-----A---T----------T--------T
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43433792  6 -  43563597 A-----------------T-----A---C----------T--------T
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4446618  6 -   4543643 A-----------------T-----A---C----------T--------T
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            143424  9 +    252755 tt--------------aaa-----g---t----------t--------t
i Manis_javanica.JSZB01003966.1                         I 5 C 0
s Manis_pentadactyla.KN017078.1                             33492  9 +     58827 tt--------------aaa-----g---t----------t--------t
i Manis_pentadactyla.KN017078.1                         I 5 C 0
s Marmota_marmota.CZRN01000005.1                         36870887  6 +  64221397 a-----------------t-----t---t----------t--------a
i Marmota_marmota.CZRN01000005.1                        I 4 I 2
s Megaderma_lyra.MegLyr_scaffold_3562                       61699  6 -    234502 T--------------AAGT-----C------------------------
i Megaderma_lyra.MegLyr_scaffold_3562                   I 6 I 1
s Mellivora_capensis.MelCap_flattened_line_1828            226069 29 -    226874 T--TTGTTTTTTTTGTTTG-----G---T--TGGGTTTTT--------T
i Mellivora_capensis.MelCap_flattened_line_1828         I 7 I 2
s Meriones_unguiculatus.MerUng_scaffold_52233                8635  6 +     15977 ------------------T----GC---T----------T--------A
i Meriones_unguiculatus.MerUng_scaffold_52233           I 2 I 4
s Mesocricetus_auratus.KB708139.1                         1043439  6 -  26018355 T-----------------T-----T---T----------T--------A
i Mesocricetus_auratus.KB708139.1                       I 2 I 2
s Microcebus_murinus.CM007691.1                          16507148  5 +  47401472 ---------------------------------------ttt-----ag
i Microcebus_murinus.CM007691.1                         C 0 I 1
s Mesoplodon_bidens.MesBid_scaffold_183284                   1064  1 +      2166 ----------------------------T--------------------
i Mesoplodon_bidens.MesBid_scaffold_183284              I 6 I 2
s Microgale_talazaci.MicTal_scaffold_34660                  28459  3 -     48017 ----------------------------T----------T--------C
i Microgale_talazaci.MicTal_scaffold_34660              I 5 I 3
s Micronycteris_hirsuta.MicHir_scaffold_37978               20102  6 -     32043 T--------------TATT-----C------------------------
i Micronycteris_hirsuta.MicHir_scaffold_37978           I 5 I 3
s Microtus_ochrogaster.CM001673.1                        22816327  6 -  98408828 t-----------------t-----t---t----------g--------a
i Microtus_ochrogaster.CM001673.1                       I 2 I 2
s Miniopterus_natalensis.LDJU01000022.1                   8206866  6 +  10048721 att--------------at-----t------------------------
i Miniopterus_natalensis.LDJU01000022.1                 I 39 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            31536  6 +     45743 A--------------TTGT-----T------------------------
i Miniopterus_schreibersii.MinSch_scaffold_24116        I 37 C 0
s Miopithecus_ogouensis.k141_2666161                        32447  6 +     34273 A-----------------T-----A---T----------T--------T
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         8111 12 -    104932 G-------------GTTTT-----T---T--------TTT--------T
i Mirounga_angustirostris.MirAng_flattened_line_8852    I 7 C 0
s Mirza_zaza.k141_226143                                     2552  6 +      8497 ---------------------------------------T----TTTAG
i Mirza_zaza.k141_226143                                C 0 I 1
s Monodon_monoceros.MonMon_M_scaffold_5598                 143792  1 +    154973 ----------------------------T--------------------
i Monodon_monoceros.MonMon_M_scaffold_5598              I 7 I 2
s Moschus_moschiferus.MosMos_scaffold_146101                 2034  1 -      4346 ----------------------------T--------------------
i Moschus_moschiferus.MosMos_scaffold_146101            I 6 I 4
s Mormoops_blainvillei.MorMeg_scaffold_2952                158639  6 +    265003 T--------------TAGT-----C------------------------
i Mormoops_blainvillei.MorMeg_scaffold_2952             I 5 I 3
s Mungos_mungo.MunMun_flattened_line_8729                  141732  5 -    168139 ------------------C-----T---T----------T--------T
i Mungos_mungo.MunMun_flattened_line_8729               I 5 I 7
s Mus_caroli.LT608236.1                                  70763049  6 +  92629107 a-----------------t-----t---t----------t--------a
i Mus_caroli.LT608236.1                                 I 2 I 2
s Mus_musculus.chr16                                     75486123  3 +  98207768 g-----------------t-----t------------------------
i Mus_musculus.chr16                                    I 2 I 11
s Mus_pahari.LT608305.1                                  67552287  6 +  89017189 A-----------------T-----T---T----------T--------A
i Mus_pahari.LT608305.1                                 I 2 I 2
s Mus_spretus.CM004110.1                                 74327299  3 +  97876770 N-----------------t-----t------------------------
i Mus_spretus.CM004110.1                                I 2 I 11
s Muscardinus_avellanarius.MusAve_scaffold_9643              8156  4 +     98495 ------------------------T---T----------T--------A
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 3 I 2
s Mustela_putorius.JH417978.1                             4420956 29 -  28371801 tttggtttttttgttt--g-----g---ttgggtttt--t--------t
i Mustela_putorius.JH417978.1                           I 7 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     87101  5 -    117718 ------------------------A---A----------G-------AA
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 I 4
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             2501  5 -      8794 ------------------T-----T---T----------T--------A
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        I 4 I 2
s Nannospalax_galili.KL204535.1                           2056880  6 +   2354432 A-----------------T-----T---T----------T--------A
i Nannospalax_galili.KL204535.1                         I 20 I 40
s Nasalis_larvatus.k141_153429                               4829  6 +     48152 A-----------------A-----A---T----------T--------T
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4481712 10 -  14209539 g---gttt----------t-----t---t----------t--------t
i Neomonachus_schauinslandi.NINY01007774.1              I 7 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3948401  1 -   4490290 ----------------------------t--------------------
i Neophocaena_asiaeorientalis.KZ688543.1                I 7 I 2
s Noctilio_leporinus.NocLep_scaffold_12062                  46756  6 +     94413 T--------------TAGT-----C------------------------
i Noctilio_leporinus.NocLep_scaffold_12062              I 5 I 3
s Nomascus_annamensis.k141_1223136                          10609  6 -     11253 A-----------------T-----A---T----------T--------T
i Nomascus_annamensis.k141_1223136                      C 0 C 0
s Nomascus_concolor.k141_468488                              1252  6 -      1482 A-----------------T-----A---T----------T--------T
i Nomascus_concolor.k141_468488                         C 0 C 0
s Nomascus_gabriellae.k141_906566                            1241  6 -      2544 A-----------------T-----A---T----------T--------T
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             21715  6 -  18771707 A-----------------T-----A---T----------T--------T
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_844529                                   989  6 +      2124 A-----------------T-----A---T----------T--------T
i Nomascus_siki_a.k141_844529                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                27162  9 +   3668941 at--gt------------t-----t---t----------t--------a
i Nyctereutes_procyonoides.CAJHUB010000786.1            I 7 C 0
s Ochotona_princeps.JH802095.1                            4992992  2 -  23139505 ---------------------------------------t--------a
i Ochotona_princeps.JH802095.1                          I 304 I 2
s Nycticebus_bengalensis.LG16                            65564007  1 -  95554990 ------------------T------------------------------
i Nycticebus_bengalensis.LG16                           C 0 I 2
s Nycticebus_coucang.k141_2051882                             852  1 +      6470 ------------------T------------------------------
i Nycticebus_coucang.k141_2051882                       C 0 I 2
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65666376  1 +  89412551 ------------------T------------------------------
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 I 2
s Odobenus_rosmarus.KB229369.1                             676370  8 -   3126709 g---gttt----------t-----t---t--------------------
i Odobenus_rosmarus.KB229369.1                          I 7 I 2
s Odocoileus_virginianus.KZ101650.1                       1077157  1 +   1425656 ----------------------------t--------------------
i Odocoileus_virginianus.KZ101650.1                     I 6 I 4
s Okapia_johnstoni.LVCL01S0017931.1                         34321  1 +     78940 ----------------------------T--------------------
i Okapia_johnstoni.LVCL01S0017931.1                     I 6 I 4
s Ondatra_zibethicus.OndZib_scaffold_6821                  121660  6 +    145789 T-----------------T-----T---T----------G--------A
i Ondatra_zibethicus.OndZib_scaffold_6821               I 2 I 3
s Onychomys_torridus.OnyTor_scaffold_12578                  33599  6 +     62360 C-----------------T-----T---T----------T--------A
i Onychomys_torridus.OnyTor_scaffold_12578              I 4 I 2
s Orcinus_orca.KB316965.1                                 7222085  1 -   7562323 ----------------------------t--------------------
i Orcinus_orca.KB316965.1                               I 7 I 2
s Orycteropus_afer.OryAfe_flattened_line_13509              40542  5 -     66828 ------------------T-----C---T----------T--------C
i Orycteropus_afer.OryAfe_flattened_line_13509          I 3 I 2
s Oryctolagus_cuniculus.CM000803.1                      141872664  4 + 163896628 c-----------------t-----t---t--------------------
i Oryctolagus_cuniculus.CM000803.1                      I 5 I 2
s Otocyon_megalotis.JAEUCK010005121.1                      304498  9 -    505867 at--gt------------t-----t---t----------t--------a
i Otocyon_megalotis.JAEUCK010005121.1                   I 7 C 0
s Otolemur_crassicaudatus.k141_321880                       36017  3 +     38679 ----------------------------T----------A--------G
i Otolemur_crassicaudatus.k141_321880                   I 2 C 0
s Otolemur_garnettii.GL873528.1                          18005458  3 -  38779656 ----------------------------T----------A--------G
i Otolemur_garnettii.GL873528.1                         I 2 C 0
s Ovis_aries.CM001582.2                                 134074737  1 - 275406953 ----------------------------t--------------------
i Ovis_aries.CM001582.2                                 I 6 I 4
s Ovis_canadensis.OviCan_scaffold_6251                      75951  1 +    140051 ----------------------------T--------------------
i Ovis_canadensis.OviCan_scaffold_6251                  I 6 I 4
s Pan_paniscus.CM003386.1                               127571478  6 - 205426864 a-----------------t-----a---t----------t--------t
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120148631  6 - 196562556 a-----------------t-----a---t----------t--------t
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  30957  2 +    295523 ---------------------------------------A--------T
i Panthera_onca.PanOnc_flattened_line_1615              I 5 C 0
s Panthera_pardus.KV860323.1                              3634560  2 +  18214204 ---------------------------------------A--------T
i Panthera_pardus.KV860323.1                            I 5 C 0
s Panthera_tigris.KE721879.1                              5024338  2 -   6340057 ---------------------------------------a--------t
i Panthera_tigris.KE721879.1                            I 5 C 0
s Pantholops_hodgsonii.KE114631.1                         1063595  1 -   1292953 ----------------------------t--------------------
i Pantholops_hodgsonii.KE114631.1                       I 6 I 4
s Papio_anubis.CM001492.2                               188152576  6 - 188283584 A-----------------T-----A---C----------T--------T
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            48788  6 +     76494 A-----------------T-----A---C----------T--------T
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47509973  6 +  47705337 A-----------------T-----A---C----------T--------T
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 63955  6 -    104429 A-----------------T-----A---C----------T--------T
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  13741  6 -     29451 A-----------------T-----A---C----------T--------T
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                34144  6 +     35859 A-----------------T-----A---C----------T--------T
i Papio_ursinus.k141_3762866                            C 0 C 0
s Perodicticus_ibeanus.k141_117958                           2071  2 -     23713 ---------------------------------------T--------A
i Perodicticus_ibeanus.k141_117958                      I 2 I 6
s Perodicticus_potto.k141_713187                            21369  2 -     27972 ---------------------------------------T--------A
i Perodicticus_potto.k141_713187                        I 2 I 6
s Perognathus_longimembris.PerPac_flattened_line_22291      39967  2 -     45160 ---------------------------------------T--------C
i Perognathus_longimembris.PerPac_flattened_line_22291  I 5 I 2
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    112520  3 -    135482 ------------------C-----A---A--------------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 I 5 C 0
s Peromyscus_maniculatus.KI615518.1                       4946772  4 -   8017169 C-----------------T-----T---T--------------------
i Peromyscus_maniculatus.KI615518.1                     I 4 I 4
s Phocoena_phocoena.PhoPho_flattened_line_11948            118703  1 -    122454 ----------------------------T--------------------
i Phocoena_phocoena.PhoPho_flattened_line_11948         I 8 I 2
s Piliocolobus_badius.k141_1497351                           1829  6 -      3310 A-----------------A-----A---T----------T--------T
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       21735  6 -     82327 A-----------------A-----A---T----------T--------T
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           18487  6 +     19957 A-----------------A-----A---T----------T--------T
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26736496  6 +  26888534 A-----------------A-----A---T----------T--------T
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pithecia_albicans.k141_991845                             40482  5 -     61926 A-----------------A-----A---T----------G---------
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        21911  5 +     78826 A-----------------A-----A---T----------G---------
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              5862  5 -     15800 A-----------------A-----A---T----------G---------
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                         9060  5 -     16101 A-----------------A-----A---T----------G---------
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          2369  5 +      9673 A-----------------A-----A---T----------G---------
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13471363  5 -  19735023 A-----------------A-----A---T----------G---------
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           10271  5 -     31692 A-----------------A-----A---T----------G---------
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           2769  1 +     21690 ----------------------------T--------------------
i Platanista_gangetica.PlaMin_flattened_line_72990      I 7 I 2
s Plecturocebus_bernhardi.k141_959214                       19678  5 +     44506 A-----------------A-----A---T----------G---------
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        19888  5 +     67491 A-----------------A-----A---T----------G---------
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      10133  5 -     98129 A-----------------A-----A---T----------G---------
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     19734  5 +    147771 A-----------------A-----A---T----------G---------
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        19984  5 -     23762 A-----------------A-----A---T----------G---------
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                           450  5 -     55515 A-----------------A-----A---T----------G---------
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         19803  5 +    152463 A-----------------A-----A---T----------G---------
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      6563  5 +      8943 A-----------------A-----A---T----------G---------
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                          9523  5 +    134592 A-----------------A-----A---T----------G---------
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          20113  5 -     75465 A-----------------A-----A---T----------G---------
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              184024  5 -    373494 A-----------------T-----A---T----------T---------
i Pongo_abelii.NDHI03003816.1                           C 0 I 1
s Pongo_pygmaeus.ctg62                                   19803931  5 +  19899266 A-----------------T-----A---T----------T---------
i Pongo_pygmaeus.ctg62                                  C 0 I 1
s Presbytis_comata.k141_672698                               2067  5 -     15069 A-----------------A-----A---T----------T---------
i Presbytis_comata.k141_672698                          C 0 I 1
s Presbytis_mitrata.k141_860013                              2201  5 +     14865 A-----------------A-----A---T----------T---------
i Presbytis_mitrata.k141_860013                         C 0 I 1
s Procavia_capensis.ProCapCap_scaffold_15315                73387  5 +     78963 ------------------T-----GT--C----------T---------
i Procavia_capensis.ProCapCap_scaffold_15315            I 3 I 4
s Prolemur_simus.MPIZ01000048.1                           6845407  7 +  12164890 t-----------------t-----t---tt--t------a---------
i Prolemur_simus.MPIZ01000048.1                         C 0 I 2
s Propithecus_coquerelli.NW_012147863.1                     13865  1 -     30946 ----------------------------t--------------------
i Propithecus_coquerelli.NW_012147863.1                 I 2 I 7
s Propithecus_coronatus.k141_1353159                          548  1 +     11805 ----------------------------T--------------------
i Propithecus_coronatus.k141_1353159                    I 2 I 7
s Propithecus_diadema.k141_577245                           39881  4 +     52369 T-----------------T-----T---T--------------------
i Propithecus_diadema.k141_577245                       C 0 I 7
s Propithecus_edwardsi.k141_1317105                         32268  4 -     44753 t-----------------t-----t---t--------------------
i Propithecus_edwardsi.k141_1317105                     C 0 I 8
s Propithecus_perrieri.k141_7554                            14190  4 +     27322 T-----------------T-----T---T--------------------
i Propithecus_perrieri.k141_7554                        C 0 I 7
s Propithecus_tattersalli.k141_907138                       13829  4 -     53241 t-----------------t-----t---t--------------------
i Propithecus_tattersalli.k141_907138                   C 0 I 7
s Propithecus_verreauxi.k141_158021                         36103  1 -     48185 ----------------------------t--------------------
i Propithecus_verreauxi.k141_158021                     I 2 I 8
s Psammomys_obesus.NESX01026517.1                           30166  3 +     77221 ----------------------------T----------T--------A
i Psammomys_obesus.NESX01026517.1                       I 5 I 4
s Pteronotus_parnellii.KE867983.1                            1306  6 -     27784 tt-ag-------------t-----C------------------------
i Pteronotus_parnellii.KE867983.1                       I 5 I 3
s Pteronura_brasiliensis.PteBra_flattened_line_1343        242836 29 -    344369 T--TTGGTTTTTTTGTTTG-----G---T--TGGTTTTTT--------T
i Pteronura_brasiliensis.PteBra_flattened_line_1343     I 7 C 0
s Puma_concolor.QAVW01000427.1                          131531150  2 - 161321710 ---------------------------------------a--------t
i Puma_concolor.QAVW01000427.1                          I 5 C 0
s Pteropus_alecto.KB031157.1                             13243427  6 -  17261082 tt-ag-------------t-----t------------------------
i Pteropus_alecto.KB031157.1                            I 6 I 1
s Pteropus_vampyrus.KN525959.1                             601380  6 -   3946241 tt-ag-------------t-----t------------------------
i Pteropus_vampyrus.KN525959.1                          I 6 I 1
s Pygathrix_cinerea.k141_374971                             26192  6 +     56732 A-----------------A-----A---T----------T--------T
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6802683  6 +   6970761 A-----------------A-----A---T----------T--------T
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             2076  6 +     18040 A-----------------A-----A---T----------T--------T
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                13243  1 +     68503 ----------------------------T--------------------
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 6 I 4
s Rattus_norvegicus.chr11                                13912210  3 +  90463843 ----------------------------T----------T--------A
i Rattus_norvegicus.chr11                               I 5 I 2
s Rhinolophus_sinicus.LVEH01000179.1                      1785043  6 +   2252614 tt-ag-------------t-----t------------------------
i Rhinolophus_sinicus.LVEH01000179.1                    I 23 I 1
s Rhinopithecus_bieti.k119_102124                           12629  6 -     14454 A-----------------A-----A---T----------T--------T
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206373955  6 - 206558726 A-----------------A-----A---T----------T--------T
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44851603  6 -  45163003 A-----------------A-----A---T----------T--------T
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       5025  1 +     12214 ----------------------------T--------------------
i Saiga_tatarica.SaiTat_scaffold_82192                  I 6 I 4
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                16729  6 +    109198 T--------------TAGT-----T------------------------
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            I 6 I 1
s Saimiri_boliviensis.NW_024100938.1                     15669570  6 -  43202129 A-----------------A-----A---T----------G--------C
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        1436  6 +     34089 A-----------------A-----A---T----------G--------C
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              1379  6 -     60842 A-----------------A-----A---T----------G--------C
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              1456  6 +     67014 A-----------------A-----A---T----------G--------C
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              1452  6 +     60816 A-----------------A-----A---T----------G--------C
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 1389  6 -     76454 A-----------------A-----A---T----------G--------C
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17337913  6 -  30362882 A-----------------A-----A---T----------G--------T
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         17513  6 -     62485 A-----------------A-----A---T----------G--------T
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   28777  9 -    114521 T--------------GTTA-----G---T----------T--------T
i Scalopus_aquaticus.ScaAqu_scaffold_9300               I 4 I 2
s Semnopithecus_entellus.k141_1527475                       24617  6 +     26421 A-----------------A-----A---T----------T--------T
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       5077  6 +     20762 A-----------------A-----A---T----------T--------T
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         38812  6 +     40653 A-----------------A-----A---T----------T--------T
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                            9369  6 -     12194 A-----------------A-----A---T----------T--------T
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     22791  6 -     27512 A-----------------A-----A---T----------T--------T
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         31810  6 -     33692 A-----------------A-----A---T----------T--------T
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   96387  6 -    120886 T-----------------T-----T---T----------T--------A
i Sigmodon_hispidus.SigHis_scaffold_11332               I 2 I 2
s Solenodon_paradoxus.SolPar_flattened_line_1012            15295  9 +    739146 G--------------TCTC-----T---T----------T--------T
i Solenodon_paradoxus.SolPar_flattened_line_1012        I 5 I 2
s Sorex_araneus.JH798170.1                               17747672  9 -  27805282 tttt--------------c-----t---t----------t--------t
i Sorex_araneus.JH798170.1                              I 3 I 11
s Spermophilus_dauricus.KZ294190.1                        2236963  6 +   2842873 a-----------------t-----t---t----------t--------a
i Spermophilus_dauricus.KZ294190.1                      I 4 I 2
s Spilogale_gracilis.SpiGra_flattened_line_905             231833 12 -    276980 T-----------TTGTTTG-----G---T----------T--------T
i Spilogale_gracilis.SpiGra_flattened_line_905          I 7 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            24401  5 +     62062 ------------------C-----T---T----------T--------T
i Suricata_suricatta.SurSur_flattened_line_20339        I 5 I 2
s Sus_scrofa.CM000824.4                                 189269305  1 + 218635234 ----------------------------A--------------------
i Sus_scrofa.CM000824.4                                 I 6 I 2
s Symphalangus_syndactylus.tarseq_24                     13898774  6 +  13920577 A-----------------T-----A---T----------T--------T
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               3249  6 -      6213 C--------------TAGT-----T------------------------
i Tadarida_brasiliensis.TadBra_scaffold_145589          I 9 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               12176  5 +     45698 ------------------T-----T---T----------T--------A
i Tamandua_tetradactyla.TamTet_scaffold_26877           I 4 I 7
s Tapirus_indicus.TapInd_scaffold_176                      804174  8 +   1148477 T--------------CGAG-----T---T----------T---------
i Tapirus_indicus.TapInd_scaffold_176                   I 5 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  54834  8 +     99546 T--------------CGAG-----T---T----------T---------
i Tapirus_terrestris.TapTer_scaffold_14939              I 5 C 0
s Tarsius_lariang.k141_609102                               23506  6 +     42269 T-----------------A-----G---T----------T--------A
i Tarsius_lariang.k141_609102                           C 0 I 2
s Tarsius_wallacei.k141_48636                               56822  6 +     65473 T-----------------A-----G---T----------T--------A
i Tarsius_wallacei.k141_48636                           C 0 I 2
s Theropithecus_gelada.CM009951.1                       194004112  6 - 194193292 A-----------------T-----A---C----------T--------T
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  1020  5 +      6782 ------------------T-----T---T----------T--------A
i Tolypeutes_matacus.TolMat_scaffold_269431             I 3 I 2
s Tonatia_saurophila.TonSau_scaffold_3334                  133312  6 -    259118 T--------------TGGT-----C------------------------
i Tonatia_saurophila.TonSau_scaffold_3334               I 5 I 3
s Trachypithecus_auratus.k141_738098                        23187  6 +     38948 A-----------------A-----A---T----------T--------T
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   16914  6 -     32910 A-----------------A-----A---T----------T--------T
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       22812  6 +     24652 A-----------------A-----A---T----------T--------T
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      1690  6 -      3559 A-----------------C-----A---T----------T--------T
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           39636  6 -     54611 A-----------------A-----A---T----------T--------T
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       15635  6 +     17312 A-----------------A-----A---T----------T--------T
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    22998  6 -     25040 A-----------------C-----A---T----------T--------T
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          1664  6 +      3528 A-----------------C-----A---T----------T--------T
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  48026  6 +     51589 A-----------------C-----A---T----------T--------T
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       11202  6 +     14732 A-----------------A-----A---T----------T--------T
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       1679  6 -     28054 A-----------------A-----A---T----------T--------T
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44656474  6 -  44834318 A-----------------A-----A---T----------T--------T
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        1484  6 +      3372 A-----------------A-----A---T----------T--------T
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Trichechus_manatus.JH594618.1                          16078764  3 +  31416278 ----------------------------t----------t--------c
i Trichechus_manatus.JH594618.1                         I 4 I 3
s Tupaia_chinensis.KB320831.1                             2788608  8 -   3938065 t-----------------t-----t---t----------a------aaa
i Tupaia_chinensis.KB320831.1                           I 3 I 6
s Tupaia_tana.TupTan_flattened_line_68454                    1146  7 +     13056 T-----------------T-----T---T----------T-------AA
i Tupaia_tana.TupTan_flattened_line_68454               I 3 I 6
s Tursiops_truncatus.MRVK01000923.1                      69310803  1 -  96451834 ----------------------------t--------------------
i Tursiops_truncatus.MRVK01000923.1                     I 7 I 2
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 23972  9 -     25548 T--------------TTTC-----A---T----------T--------T
i Uropsilus_gracilis.UroGra_scaffold_4143_0             I 4 I 2
s Ursus_maritimus.KK498671.1                              6511419  4 +  28682327 ------------------------t---t----------t--------t
i Ursus_maritimus.KK498671.1                            I 6 C 0
s Varecia_rubra.k141_432109                                  2249  6 -     20643 t-----------------t-----t---t----------g--------g
i Varecia_rubra.k141_432109                             C 0 I 1
s Varecia_variegata.k141_775891                             21793  6 -     33872 t-----------------t-----t---t----------g--------g
i Varecia_variegata.k141_775891                         I 8 I 1
s Vicugna_pacos.KN269600.1                                1522110  7 -   2331223 ttt--------------ag-----t---t--------------------
i Vicugna_pacos.KN269600.1                              I 5 I 2
s Vulpes_lagopus.VulLag_flattened_line_2045                134568  9 -    281493 A--------------TGTT-----T---T----------T--------A
i Vulpes_lagopus.VulLag_flattened_line_2045             I 7 C 0
s Xerus_inauris.XerIna_scaffold_7898                       124066  6 -    134049 A-----------------C-----T---T----------G--------T
i Xerus_inauris.XerIna_scaffold_7898                    I 4 I 2
s Zalophus_californianus.ZalCal_flattened_line_4097        211095 10 -    227762 G-------------TTTTT-----T---T----------T--------T
i Zalophus_californianus.ZalCal_flattened_line_4097     I 7 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     12300  6 -     20485 T-----------------T-----C---T----------T--------A
i Zapus_hudsonius.ZapHud_scaffold_64392                 I 2 I 2
s Ziphius_cavirostris.ZipCav_flattened_line_127025           4305  1 -      8775 ----------------------------T--------------------
i Ziphius_cavirostris.ZipCav_flattened_line_127025      I 6 I 2
e Tragulus_javanicus.TraJav_scaffold_14717                   2652  7 +     90398 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            93631  8 +    112873 I
e Myotis_myotis.MyoMyo_scaffold_6123                         7641  0 +     66751 C
e Myotis_lucifugus.GL429887.1                             3462452  0 -   3747815 C
e Myotis_davidii.KB114863.1                               5016535  6 +   6462685 I
e Myotis_brandtii.KE161952.1                               964866  0 +   8389877 C
e Murina_feae.MurFea_scaffold_2254                          16540  0 -    100666 C
e Lasiurus_borealis.LasBor_scaffold_5102                   111019  7 -    115756 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16291  1 -    119109 I
e Octodon_degus.JH651621.1                                3678743 1836 +  10294119 I
e Heterocephalus_glaber.JH602058.1                        2548028 229 +  31725842 I
e Fukomys_damarensis.KN123630.1                          13889876  0 -  19261668 C
e Dolichotis_patagonum.DolPat_scaffold_14102                33375  0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             56104 16 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                14631 16 +     26546 I
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 27476  0 -     67205 C
e Cavia_tschudii.CavTsc_scaffold_488                       173989  0 +    436027 C
e Cavia_porcellus.DS562889.1                             15795798  0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15783848 16 -  24422027 I

a score=0.000000
s hg38.chr4_GL000008v2_random                                8740 16 +    209709 T------T--A-C----T---T-----------T----------------A--CCTG----TT--TG
s Acinonyx_jubatus.LLWD01000356.1                         2030812 18 +   3721120 ----------t-tttttt---t-----------t----------------a--cctg----tt--tc
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    109095  8 -    189883 T------CTCT-T----T---C---------------------------------------------
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 2 I 7
s Ailuropoda_melanoleuca.LNAT01000321.1                  10654149 14 +  23371972 ----------t-t----t---t-----------t----------------a--cctg----tt--tg
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7090881 14 -  16596857 ----------t-t----t---t-----------a----------------a--ccta----gt--TA
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                    8936  9 -     22067 T------T--C-C----T---T-----------T----------------A--T-------------
i Allactaga_bullata.AllBul_scaffold_70162               I 2 I 702
s Allenopithecus_nigroviridis.k141_3103707                  59754 16 +     61638 T------T--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        51562 16 +     53391 T------T--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         2286 16 +     72529 T------T--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          1862 16 +      3797 T------T--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             7040 16 -     18050 T------T--A-C----T---T-----------T----------------A--CCTT----TT--TG
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  8156  7 -     11521 T------T--A-C----G---T-----------T---------------------------------
i Alouatta_caraya.k141_5460                             C 0 I 4
s Alouatta_discolor.k141_811576                              7717 16 -     21359 T------T--A-C----T---T-----------T----------------A--CCTT----TT--TG
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_palliata.k141_1316127                             6959  7 +     10410 ------------------------------------------------------CTT----TT--TG
i Alouatta_palliata.k141_1316127                        I 4 C 0
s Alouatta_juara.k141_1856473                                6099  7 +      7227 T------T--A-C----C---T-----------T---------------------------------
i Alouatta_juara.k141_1856473                           C 0 I 4
s Alouatta_macconnelli.k141_1331706                          7013  7 -     10438 T------T--A-C----C---T-----------T---------------------------------
i Alouatta_macconnelli.k141_1331706                     C 0 I 4
s Alouatta_nigerrima.k141_2718643                            3668  7 +      7047 T------T--A-C----C---T-----------T---------------------------------
i Alouatta_nigerrima.k141_2718643                       C 0 I 4
s Alouatta_puruensis.k141_1284840                             753 16 -      4927 T------T--A-C----T---T-----------T----------------A--CCTT----TT--TG
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             3686  7 +      6429 T------T--A-C----C---T-----------T---------------------------------
i Alouatta_seniculus.k141_990213                        C 0 I 4
s Ammotragus_lervia.NIVO01013474.1                        3517571 17 +   4113121 t------c--t-t----t---t-----------a----------------a-acTTA----TT--TG
i Ammotragus_lervia.NIVO01013474.1                      I 4 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      387769 12 -    631301 -----------------T---G-----------T----------------A--CCTA----TT--TA
i Anoura_caudifer.AnoCau_scaffold_422                   I 3 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            28204 17 +     33004 T------C--T-T----T---T-----------A----------------AA-TTTA----TT--TG
i Antilocapra_americana.AntAmePen_scaffold_42841        I 4 C 0
s Aotus_azarae.k141_3170768                                 59400 16 +     78111 T------T--A-C----T---T-----------T----------------A--CCTG----TT--TG
i Aotus_azarae.k141_3170768                             C 0 I 12
s Aotus_griseimembra.k141_3275623                            2330 16 +     22701 T------T--A-C----T---T-----------T----------------A--CCTG----TT--TG
i Aotus_griseimembra.k141_3275623                       C 0 I 10
s Aotus_nancymaae.KZ196176.1                              5746288 16 +   9889416 T------T--A-C----T---T-----------T----------------A--CCTG----TT--TG
i Aotus_nancymaae.KZ196176.1                            C 0 I 9
s Aotus_trivirgatus.k141_1740727                             2869 16 -    104377 T------T--A-C----T---T-----------T----------------A--CCTG----TT--TG
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               2878 16 +     23246 T------T--A-C----T---T-----------T----------------A--CCTG----TT--TG
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                      930 16 +      5067 T------G--T-C----T---T-----------T----------------A--CCTA----TT--TT
i Aplodontia_rufa.AprRuf_scaffold_156013                I 2 C 0
s Arctocebus_calabarensis.k141_1161114                      14877  6 +     17483 G------T--A-C----T---T---------------------------------------------
i Arctocebus_calabarensis.k141_1161114                  I 2 I 3
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 5911 12 -     29036 -----------------T---T-----------T----------------A--CCTA----TT--TG
i Artibeus_jamaicensis.ArtJam_scaffold_41619            I 3 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9536141 16 +  39197703 T------T--A-C----T---T-----------T----------------A--CCTG----TT--TG
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             57425 16 +     85812 T------T--A-C----T---T-----------T----------------A--CCTG----TT--TG
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 8424 16 +     89302 T------T--A-C----T---T-----------T----------------A--CCTG----TT--TG
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             12934 16 -     58268 T------T--A-C----T---T-----------T----------------A--CCTG----TT--TG
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             60920 16 +    119057 T------T--A-C----T---T-----------T----------------A--CCTG----TT--TG
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               2871 16 -     25888 T------T--A-C----T---T-----------T----------------A--CCTG----TT--TG
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 3629 16 -     16375 T------T--T-C----T---T-----------T----------------A--CCTA----TT--TG
i Avahi_laniger.k141_2840928                            I 9 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26377524 17 +  51448160 a------t--t-t----t---t-----------a----------------a-actta----tt--tg
i Balaenoptera_acutorostrata.KI537095.1                 I 2 C 0
s Balaenoptera_bonaerensis.DF502048.1                        2755 17 -     13118 t------t--t-t----t---t-----------a----------------a-tcttA----TT--TG
i Balaenoptera_bonaerensis.DF502048.1                   I 2 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   40671 17 -     72089 T------C--T-T----T---T-----------A----------------AA-CTTA----TT--TG
i Beatragus_hunteri.BeaHun_scaffold_21644               I 4 C 0
s Bison_bison.KN264915.1                                  6556815 17 +   6870073 t------c--t-t----t---t-----------a----------------a-actta----tt--tg
i Bison_bison.KN264915.1                                I 4 C 0
s Bos_indicus.CM003021.1                                138137050 17 - 161108492 t------c--t-t----t---t-----------a----------------a-aNTTA----TT--TG
i Bos_indicus.CM003021.1                                I 4 C 0
s Bos_mutus.JH883513.1                                     569427 17 -    998990 t------c--t-t----t---t-----------a----------------a-actta----tt--tg
i Bos_mutus.JH883513.1                                  I 4 C 0
s Bos_taurus.CM000177.6                                 136292783 17 - 158972876 t------c--t-t----t---t-----------a----------------a-attta----tt--tg
i Bos_taurus.CM000177.6                                 I 4 C 0
s Bubalus_bubalis.KI419065.1                              1228403 17 -   1914593 t------c--t-t----t---t-----------a----------------a-actTA----TT--TG
i Bubalus_bubalis.KI419065.1                            I 4 C 0
s Cacajao_ayresi.k141_724503                               110774 12 -    171031 -----------------T---T-----------T----------------A--CCTG----TT--TG
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                  9800 12 +    125063 -----------------T---T-----------T----------------A--CCTG----TT--TG
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                11848 12 -    216513 -----------------T---T-----------T----------------A--CCTG----TT--TG
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        4388 12 -    134917 -----------------T---T-----------T----------------A--CCTG----TT--TG
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3217040 17 -   8989139 t------t--t-t----t---t-----------t----------------a-actta----tt--tg
i Camelus_bactrianus.KN276303.1                         I 2 C 0
s Camelus_dromedarius.KN271192.1                           394744 17 -  15254737 t------t--t-t----t---t-----------t----------------a-actta----tt--tg
i Camelus_dromedarius.KN271192.1                        I 2 C 0
s Camelus_ferus.KB016973.1                                2970478 17 +   6889770 t------t--t-t----t---t-----------t----------------a-actta----tt--tg
i Camelus_ferus.KB016973.1                              I 2 C 0
s CanFam4.chr31                                          11515532 14 +  39901454 ----------T-T----T---T-----------T----------------A--CCTG----TT--TG
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   10549 14 +     87036 ----------T-T----T---T-----------T----------------A--CCTG----TT--TG
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11262191 14 -  35597290 ----------t-t----t---t-----------t----------------a--cctg----tt--tG
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11084720 14 +  39895921 ----------t-t----t---t-----------t----------------a--cctg----tt--tG
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16451754 14 -  44759192 ----------t-t----t---t-----------t----------------a--cctg----tt--tG
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21322680 15 + 157394656 ----------t-t----t---t-----------a----------------a-acTTA----TT--TG
i Capra_aegagrus.CM003214.1                             I 6 C 0
s Capra_hircus.CM004562.1                               135703907 15 - 157403528 ----------t-t----t---t-----------a----------------a-acTTA----TT--TG
i Capra_hircus.CM004562.1                               I 6 C 0
s Capromys_pilorides.CapPil_scaffold_647363                  1414 14 +      1887 ------------T---CT---T-----------C----------------A--CCTG----AT--TT
i Capromys_pilorides.CapPil_scaffold_647363             I 4 C 0
s Carlito_syrichta.NW_007248099.1                          306033 13 +    345090 ------------T----T---T-----------A----------------A--CTTG----TT--TA
i Carlito_syrichta.NW_007248099.1                       I 2 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               56950 12 +     67245 -----------------T---T-----------T----------------A--CCTA----TT--GG
i Carollia_perspicillata.CarPer_scaffold_4436           I 3 C 0
s Castor_canadensis.CasCan_scaffold_47037                   27436 16 +     33760 T------T--T-C----T---T-----------T----------------G--CCTA----TT--TT
i Castor_canadensis.CasCan_scaffold_47037               I 2 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   156241 18 -    276539 G------G--T-T----T---T-----------A----------------AAATGCA----TT--TG
i Catagonus_wagneri.CatWag_scaffold_1305                I 2 C 0
s Cebus_albifrons.Contig22                               18887616 16 -  29618158 T------T--A-C----T---T-----------T----------------A--CCTG----TT--TG
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 5160 16 -     26817 T------T--A-C----T---T-----------T----------------A--CCTG----TT--TG
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                 9403 16 +     25043 T------T--A-C----T---T-----------T----------------A--CCTG----TT--TG
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         5070 13 +     21754 ------------T----T---T-----------A----------------A--CTTG----TT--TA
i Cephalopachus_bancanus.k141_702587                    I 2 C 0
s Ceratotherium_simum.JH767818.1                          4360743 14 +   7569818 ----------C-C----T---T-----------T----------------A--CCTT----TT--AG
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623          498 14 -      9338 ----------C-C----T---T-----------T----------------A--CCTG----TT--AG
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6551550 16 +   6739814 T------T--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      53027 16 -     54931 T------T--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         18011 16 -     19697 T------T--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         55542 16 -    107033 T------T--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        1983 16 -      3853 T------T--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          25916 16 +     30494 T------T--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           1940 16 -      4022 T------T--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          1833 16 -      3505 T------T--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           20637 16 +     35983 T------T--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11987159 16 +  12117833 T------T--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46473912 16 +  46592721 T------T--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      31739 16 +     33420 T------T--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        1775 16 -      3443 T------T--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      2766 16 -      4669 T------T--A-C----C---T-----------T----------------A--TCTG----TT--TG
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        2566 16 -      4411 T------T--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         2091 16 -      4205 T------T--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_1070855           308 15 -      1715 T------A--T-T----C---T-----------A----------------A--CCTG----TT--T-
i Chaetophractus_vellerosus.ChaVel_scaffold_1070855     I 2 I 4
s Cheirogaleus_major.k141_1157592                           55934 16 -     68416 T------T--T-C----T---T-----------T----------------A--CCTA----TT--TG
i Cheirogaleus_major.k141_1157592                       I 1 C 0
s Cheirogaleus_medius.k141_133808                            4980 16 +     13308 T------T--T-C----T---T-----------T----------------A--CCTA----TT--TG
i Cheirogaleus_medius.k141_133808                       I 1 C 0
s Cheracebus_lucifer.k141_619653                             2417 12 -     18223 -----------------T---T-----------T----------------A--CCTG----TT--TG
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             19440 12 +     25473 -----------------T---T-----------T----------------A--CCTG----TT--TG
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           38479 12 +     57117 -----------------T---T-----------T----------------A--CCTG----TT--TG
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          43154 12 +     54541 -----------------T---T-----------T----------------A--CCTG----TT--TG
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15958815 13 +  43084221 ------------t----t---t-----------t----------------a--cctG----CT--TT
i Chinchilla_lanigera.JH721867.1                        I 4 C 0
s Chiropotes_israelita.k141_1189915                         67995 12 +    196370 -----------------T---T-----------T----------------A--CCTG----TT--TG
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          12176 12 +     40510 -----------------T---T-----------T----------------A--CCTG----TT--TG
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15135372 16 -  15256731 T------T--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      30418 16 -     53260 T------T--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101140867 16 + 101219884 T------T--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                13929 15 -     21363 T------A--T-C----C---T-----------T----------------A--CCTG----TT--T-
i Choloepus_didactylus.ChoDid_scaffold_36182            I 2 I 2
s Choloepus_hoffmanni.KN194586.1                           759235 15 +    964067 T------G--T-C----C---T-----------T----------------A--CCTg----tt--t-
i Choloepus_hoffmanni.KN194586.1                        I 2 I 2
s Chrysochloris_asiatica.ChrAsi_scaffold_141308              6024 15 -     12508 T------T--T-A----A---T-----------T----------------A--TCTG----TT--T-
i Chrysochloris_asiatica.ChrAsi_scaffold_141308         I 3 C 0
s Colobus_angolensis.KN985967.1                          10879446 16 +  10971483 T------T--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147660604 16 + 156195979 T------T--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            12591 16 +     23629 T------T--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60610192 24 +  78930452 tttattta--t-g----t---gcatatatgcaaG---------------------------------
i Condylura_cristata.JH655880.1                         I 2 I 9
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         36646 14 -     40477 ----------C-T----T---T-----------T----------------A--TCTG----TT--TA
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     I 1 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 274531  9 -    399297 T------G--C-T----T---T-----------T----------------A--T-------------
i Cricetomys_gambianus.CriGam_scaffold_949              I 2 C 0
s Cricetulus_griseus.LT883672.1                          53025718 15 +  72327488 T------C--T-T----T---T-----------C----------------A--TCTA----TC--T-
i Cricetulus_griseus.LT883672.1                         I 2 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             16973  9 -     19186 ------------------------------------------------------CTA----CCTGTG
i Crocidura_indochinensis.CroInd_scaffold_38409         I 813 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            48847  8 -     70449 -----------------------------------------------------CCTG----TT--TC
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 5 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  205281 12 -    956709 ------------T----T---T-----------T----------------A--ACTA----CT--G-
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 27476  7 -     67205 ------------------------------------------------------CTG----AT--TT
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          179117 15 -   6883506 t------a--t-t----c---t-----------a----------------a--CCTG----TT--T-
i Dasypus_novemcinctus.JH568778.1                       I 2 I 4
s Daubentonia_madagascariensis.ctg11                     16841802 16 +  31942871 T------T--T-C----T---T-----------T----------------A--CCTG----TT--TG
i Daubentonia_madagascariensis.ctg11                    I 1 C 0
s Delphinapterus_leucas.KZ290064.1                       80034270 17 -  96802777 t------t--t-t----t---t-----------a----------------a-acttt----tt--tg
i Delphinapterus_leucas.KZ290064.1                      I 2 C 0
s Desmodus_rotundus.KZ672188.1                           18696263 12 -  18957592 -----------------T---T-----------T----------------A--CCTA----TT--TG
i Desmodus_rotundus.KZ672188.1                          I 3 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 319405 14 +    993696 ----------C-C----T---T-----------T----------------A--CCTG----TT--AG
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_170113                  663 14 +       818 ----------C-C----T---T-----------T----------------A--CCTG----TT--AG
i Diceros_bicornis.DicBicMic_scaffold_170113            C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   154680 14 +    228994 ------------T---CC---T-----------T----------------A--CCTG----CT--TT
i Dinomys_branickii.DinBra_scaffold_1996                I 4 C 0
s Dipodomys_ordii.KN672545.1                              3652427 16 +   4240102 T------T--T-C----T---G-----------T----------------a--ccta----tt--tt
i Dipodomys_ordii.KN672545.1                            I 2 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 23981 16 +     28912 T------T--T-C----T---G-----------T----------------A--CCTA----TT--TT
i Dipodomys_stephensi.DipSte_scaffold_44365             I 2 C 0
s Echinops_telfairi.JH980316.1                           22991517 15 -  44670279 T------G--T-C----A---T-----------T----------------A--CCTA----TT--T-
i Echinops_telfairi.JH980316.1                          I 3 C 0
s Eidolon_helvum.KE772537.1                                  9637 14 +     24177 ----------C-C----T---T-----------C----------------A--CCTG----TT--TG
i Eidolon_helvum.KE772537.1                             I 1 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1488929 17 +   1727528 t------c--t-t----t---t-----------a----------------a-actTA----TT--TG
i Elaphurus_davidianus.JRFZ01086400.1                   I 4 C 0
s Elephantulus_edwardii.JH947210.1                        7803716 15 +  15467074 t------t--t-c----t---t-----------t----------------g--cttc----tt--g-
i Elephantulus_edwardii.JH947210.1                      I 1 C 0
s Ellobius_lutescens.LOEQ01003611.1                        236184 15 -    369425 t------t--t-t----t---t-----------t----------------a--tcta----tc--T-
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           3192 16 -      7838 t------t--ttt----t---t-----------t----------------a--tcta----tc--t-
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85868602 14 +  99434291 ----------t-t----t---a-----------a----------------a--ccta----tt--ta
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Equus_asinus.JREZ01000062.1                             5850125 14 -   7175178 ----------C-C----T---C-----------T----------------C--CCTG----TT--AG
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13348628 14 +  41866177 ----------C-C----T---C-----------T----------------C--CCTG----TT--AG
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          10118 14 +     92910 ----------C-C----T---C-----------T----------------C--CCTG----TT--AG
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11529720  7 +  16010500 T------T--T-C----T---T-----------T---------------------------------
i Erinaceus_europaeus.JH835290.1                        I 2 I 9
s Erythrocebus_patas.Contig8                             48767551 16 -  48907691 T------T--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          312408 17 +    330699 T------T--T-T----T---T-----------A----------------AA-CTTA----TT--TG
i Eschrichtius_robustus.EscRob_flattened_line_685       I 2 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             58837 17 +     89355 T------T--T-T----T---T-----------A----------------AA-CTTA----TT--TG
i Eubalaena_japonica.EubJap_flattened_line_7756         I 2 C 0
s Eulemur_albifrons.k141_715837                              1992 16 +     13586 G------T--T-C----T---T-----------C----------------A--CCTA----TT--TG
i Eulemur_albifrons.k141_715837                         I 1 C 0
s Eulemur_collaris.k141_311830                               1926 17 -      6809 G-----GT--T-C----T---T-----------C----------------A--CCTA----TT--TG
i Eulemur_collaris.k141_311830                          I 1 C 0
s Eulemur_coronatus.k141_3240342                             8400 16 +     36558 G------T--T-C----T---T-----------C----------------A--CCTA----TT--TG
i Eulemur_coronatus.k141_3240342                        I 1 C 0
s Eulemur_flavifrons.k141_903901                             4715 16 +     60246 G------T--T-C----T---T-----------C----------------A--CCTA----TT--TG
i Eulemur_flavifrons.k141_903901                        I 1 C 0
s Eulemur_fulvus.k141_653297                                 8204 16 +    109717 G------T--T-C----T---T-----------C----------------A--CCTA----TT--TG
i Eulemur_fulvus.k141_653297                            I 1 C 0
s Eulemur_macaco.k141_1341545                               12577 16 +     16540 G------T--T-C----T---T-----------C----------------A--CCTA----TT--TG
i Eulemur_macaco.k141_1341545                           I 1 C 0
s Eulemur_mongoz.k141_825972                                12854 16 +     27497 G------T--T-C----T---T-----------C----------------A--CCTA----TT--TG
i Eulemur_mongoz.k141_825972                            I 1 C 0
s Eulemur_rubriventer.k141_411740                           15316 16 +     26808 G------T--T-C----T---T-----------C----------------A--CCTA----TT--TG
i Eulemur_rubriventer.k141_411740                       I 1 C 0
s Eulemur_rufus.k141_1620292                                30044 16 +     46535 G------T--T-C----T---T-----------C----------------A--CCTA----TT--TG
i Eulemur_rufus.k141_1620292                            I 1 C 0
s Eulemur_sanfordi.k141_186399                              12767 16 -     29447 G------T--T-C----T---T-----------C----------------A--CCTA----TT--TG
i Eulemur_sanfordi.k141_186399                          I 1 C 0
s Felis_catus.CM001386.2                                129889799  9 - 159252932 --------------------------------------------------a--cctg----tt--tc
i Felis_catus.CM001386.2                                I 7 C 0
s Felis_catus_fca126.CM031420.1                         129276873  9 - 158578461 --------------------------------------------------a--cctg----tt--tc
i Felis_catus_fca126.CM031420.1                         I 7 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 18008  9 +     52776 --------------------------------------------------A--CCTG----TT--TC
i Felis_nigripes.FelNig_flattened_line_8080             I 7 C 0
s Galago_moholi.ctg555                                     207951 16 -    847004 G------T--T-C----T---T-----------T----------------A--GATA----TT--TG
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           10331 16 -     43889 G------T--T-C----T---T-----------T----------------A--GATA----TT--TG
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           7381 16 +     27357 G------T--T-C----T---T-----------T----------------A--CATA----TT--TG
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               153258 16 +    324696 T------T--T-C----T---T-----------G----------------A--CCTG----TT--TG
i Galeopterus_variegatus.GalVar_scaffold_354            I 2 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    178454 17 -    189561 T------C--T-T----T---T-----------A----------------AA-CTTA----TT--TG
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 4 C 0
s Glis_glis.GliGli_scaffold_79770                            9655 16 -     18683 T------T--T-C----T---T-----------T----------------A--TCTG----TT--TT
i Glis_glis.GliGli_scaffold_79770                       I 2 C 0
s Gorilla_beringei.k141_111300                               2141 16 -     14630 T------T--A-C----T---T-----------T----------------A--CCTG----TT--TG
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119649240 16 - 195582420 t------t--a-c----t---t-----------t----------------a--ccTG----TT--TG
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   74206 16 +    118900 T------T--T-C----T---T-----------C----------------A--TCTG----TT--TT
i Graphiurus_murinus.GraMur_scaffold_4493               I 2 C 0
s Hapalemur_alaotrensis.k141_1198205                         2558 16 +      3980 T------T--T-C----T---T-----------T----------------A--CCTA----TT--TG
i Hapalemur_alaotrensis.k141_1198205                    I 1 C 0
s Hapalemur_gilberti.k141_97962                             25033 16 +     26611 T------T--T-C----T---T-----------T----------------A--CCTA----TT--TG
i Hapalemur_gilberti.k141_97962                         I 1 C 0
s Hapalemur_griseus.k141_1387522                             2494 16 +     56096 T------T--T-C----T---T-----------T----------------A--CCTA----TT--TG
i Hapalemur_griseus.k141_1387522                        I 1 C 0
s Hapalemur_meridionalis.k141_186231                        25769 16 -     42470 t------t--t-c----t---t-----------t----------------a--ccta----tt--tg
i Hapalemur_meridionalis.k141_186231                    I 1 C 0
s Hapalemur_occidentalis.k141_797938                        42364 16 -     54384 t------t--t-c----t---t-----------t----------------a--ccta----tt--tg
i Hapalemur_occidentalis.k141_797938                    I 1 C 0
s Helogale_parvula.HelPar_flattened_line_22962              14049 14 +     53719 ----------T-T----T---T-----------T----------------A--CCTG----TT--TG
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                24940 17 -     91191 T------C--T-T----T---T-----------A----------------AA-CTTA----TT--TG
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 4 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               53532 15 +     73687 T------T--T-C----T---T-----------T----------------C--CCCG----TT--T-
i Heterohyrax_brucei.HetBruBak_scaffold_25354           I 3 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              144520 17 +    277961 T------T--T-C----T---T-----------A----------------AA-CTTA----TT--TG
i Hippopotamus_amphibius.HipAmp_scaffold_1308           I 2 C 0
s Hipposideros_armiger.JXIK01001085.1                      275957 14 -    477199 ----------c-c----t---T-----------G----------------A--TCTG----TT--TG
i Hipposideros_armiger.JXIK01001085.1                   I 1 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              5115 14 -      9143 ----------C-C----T---T-----------G----------------A--TCTG----TT--TG
i Hipposideros_galeritus.HipGal_scaffold_104691         I 1 C 0
s Hoolock_leuconedys.ctg79                                        23 16 -   7690867 T------T--A-C----T---T-----------T----------------A--CGTG----TT--TG
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 13115 16 -     67322 ----------T-T--TGT---T-----------T----------------A--CCTG----TT--TC
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hylobates_abbotti.k141_493872                              1946 16 +      5897 T------T--A-C----T---T-----------G----------------A--CGTG----TT--TG
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_282275                               1159 16 +      1846 T------T--A-C----T---T-----------G----------------A--CGTG----TT--TG
i Hylobates_agilis.k141_282275                          C 0 C 0
s Hylobates_klossii.k141_584463                               323 16 -      1009 T------T--A-C----T---T-----------T----------------A--GGTG----TT--TG
i Hylobates_klossii.k141_584463                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14621492 16 -  25970782 T------T--A-C----T---T-----------G----------------A--CGTG----TT--TG
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1133650                            1381 16 -      2775 T------T--A-C----T---T-----------G----------------A--CGTG----TT--TG
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             29984 16 -     60944 T------T--A-C----T---T-----------G----------------A--CGTG----TT--TG
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     3163 16 +     22540 T------T--G-C----T---T-----------T----------------A--CCTA----TT--TT
i Hystrix_cristata.HysCri_scaffold_50788                I 2 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7123051 16 +  13083262 t------g--t-c----t---t-----------t----------------a--CCTC----TA--TT
i Ictidomys_tridecemlineatus.JH393315.1                 I 2 C 0
s Indri_indri.k141_1884019                                    225 16 -      2196 t------t--t-t----t---t-----------t----------------a--ccta----tt--tg
i Indri_indri.k141_1884019                              I 1 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               6196 17 +     17520 T------T--T-T----T---T-----------A----------------AA-CATT----TT--TG
i Inia_geoffrensis.IniGeo_flattened_line_66725          I 2 C 0
s Jaculus_jaculus.JH725517.1                              8561898  9 +  11848649 t------t--c-c----t---t-----------t----------------a--t-------------
i Jaculus_jaculus.JH725517.1                            I 2 I 426
s Kogia_breviceps.KogBre_flattened_line_35920               21029 17 +     37189 T------T--T-T----T---T-----------A----------------AA-CTTA----TT--TG
i Kogia_breviceps.KogBre_flattened_line_35920           I 1 C 0
s Lagothrix_lagothricha.k141_12968                          46994 16 -    147782 T------T--A-C----T---T-----------T----------------A--CCTG----TT--TG
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   111026 17 -    115756 ----------T-T----TCTTT-----------T----------------A--CCTG----TT--TG
i Lasiurus_borealis.LasBor_scaffold_5102                I 7 C 0
s Lemur_catta.scaffold_1                                258404042 16 - 285822530 T------T--T-C----T---T-----------T----------------A--CCTA----TT--TG
i Lemur_catta.scaffold_1                                I 1 C 0
s Lepilemur_ankaranensis.k141_884009                        20927 16 +     39228 T------T--T-C----T---T-----------T----------------A--CCTA----TT--TG
i Lepilemur_ankaranensis.k141_884009                    I 1 C 0
s Lepilemur_dorsalis.k141_134267                            50300 16 +     63517 T------T--T-C----T---T-----------T----------------A--CGTA----TT--TG
i Lepilemur_dorsalis.k141_134267                        I 1 C 0
s Lepilemur_ruficaudatus.k141_617879                        75521 16 +    116806 T------T--T-C----T---T-----------T----------------A--CCTA----TT--TG
i Lepilemur_ruficaudatus.k141_617879                    I 1 C 0
s Lepilemur_septentrionalis.k141_578524                     28565 16 -     33031 t------t--t-c----t---t-----------t----------------a--ccta----tt--tg
i Lepilemur_septentrionalis.k141_578524                 I 1 C 0
s Leptonychotes_weddellii.KB714749.1                      3082821 14 -   3498232 ----------t-t----t---t-----------t----------------a--cctg----tt--tg
i Leptonychotes_weddellii.KB714749.1                    I 1 C 0
s Lepus_americanus.LepAme_scaffold_62849                    10021 16 +     22452 T------T--C-T----C---T-----------T----------------G--CATA----TT--TA
i Lepus_americanus.LepAme_scaffold_62849                I 2 I 3
s Lipotes_vexillifer.KE558548.1                            133372 17 +   3060487 t------t--t-t----t---t-----------a----------------a-acatt----tt--tg
i Lipotes_vexillifer.KE558548.1                         I 2 C 0
s Lophocebus_aterrimus.ctg55                             19244638 16 +  19376315 T------T--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            7681 16 +     84689 G------T--T-C----T---T-----------T----------------A--CATA----TT--TG
i Loris_lydekkerianus.k141_550999                       I 2 C 0
s Loris_tardigradus.ctg97                                 3775432 16 +   6799190 G------T--T-C----T---T-----------T----------------A--CATA----TT--TG
i Loris_tardigradus.ctg97                               I 2 C 0
s Loxodonta_africana.GL010040.1                          20588292 15 -  62548349 t------t--t-c----t---g-----------t----------------a--cCCG----TT--G-
i Loxodonta_africana.GL010040.1                         I 3 C 0
s Lycaon_pictus.CM007556.1                               11084176 14 +  39895028 ----------t-t----t---t-----------t----------------a--cctg----tt--tG
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             16321 16 +     74745 T------C--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12702827 16 +  12821369 T------C--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               4923 16 +      6569 T------C--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           43225 16 +     63263 T------C--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_1068107                               11801 16 +     12679 T------C--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                1374 16 +      3017 T------C--A-C----T---T-----------T----------------A--TCTG----TT--TA
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  42986 16 -     79256 T------C--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196031904 16 + 196197964 T------C--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11442010 16 +  11645122 T------C--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   1933 16 -     46448 T------C--A-C----T---T-----------T----------------A--TCTG----TC--TG
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                1764 16 -      3617 T------C--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 12096 16 -     55006 T------C--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43837133 16 +  43892939 T------C--A-C----T---T-----------T----------------A--TCTG----TT--TA
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                4355 16 -      5978 T------C--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               1938 16 -     27140 T------C--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43433798 16 -  43563597 T------T--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4446624 16 -   4543643 T------T--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            143433 14 +    252755 ----------c-c----t---t-----------t----------------a--CCTG----TT--TG
i Manis_javanica.JSZB01003966.1                         C 0 I 4
s Manis_pentadactyla.KN017078.1                             33501 14 +     58827 ----------c-c----t---t-----------t----------------a--cctg----tt--tg
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36870895 16 +  64221397 c------g--t-C----T---T-----------T----------------A--CCTC----TA--TT
i Marmota_marmota.CZRN01000005.1                        I 2 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       61706 14 -    234502 ----------C-C----T---T-----------T----------------A--CCTG----TT--TG
i Megaderma_lyra.MegLyr_scaffold_3562                   I 1 C 0
s Mellivora_capensis.MelCap_flattened_line_1828            226100 10 -    226874 ---------------------------------A----------------A--CCTA----TT--TG
i Mellivora_capensis.MelCap_flattened_line_1828         I 2 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233                8645  7 +     15977 -----------------------------------------------------TTTA----TC--G-
i Meriones_unguiculatus.MerUng_scaffold_52233           I 4 C 0
s Mesocricetus_auratus.KB708139.1                         1043447 15 -  26018355 T------C--T-T----T---T-----------C----------------A--TCTA----TC--T-
i Mesocricetus_auratus.KB708139.1                       I 2 C 0
s Mesoplodon_bidens.MesBid_scaffold_183284                   1067 17 +      2166 T------T--T-T----T---T-----------A----------------AA-CTTA----TT--TG
i Mesoplodon_bidens.MesBid_scaffold_183284              I 2 C 0
s Microcebus_murinus.CM007691.1                          16507154 16 +  47401472 t------t--t-c----t---t-----------t----------------a--ccTA----TT--TG
i Microcebus_murinus.CM007691.1                         I 1 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  28465 15 -     48017 T------T--T-C----A---T-----------T----------------A--CTTA----TT--T-
i Microgale_talazaci.MicTal_scaffold_34660              I 3 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               20111 12 -     32043 -----------------T---T-----------T----------------A--CCTA----TT--TG
i Micronycteris_hirsuta.MicHir_scaffold_37978           I 3 I 3
s Microtus_ochrogaster.CM001673.1                        22816335 10 -  98408828 ---------------------t-----------t----------------a--tcta----TC--T-
i Microtus_ochrogaster.CM001673.1                       I 2 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8206872 19 +  10048721 t------g--t-t----tgttt-----------g----------------a--cgTG----TT--TG
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            31542 19 +     45743 T------G--T-T----TGTTT-----------G----------------A--CCTG----TT--TG
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        32453 16 +     34273 T------T--A-C----T---T-----------T----------------C--TCTG----TT--TG
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         8123 14 -    104932 ----------T-T----T---T-----------T----------------A--CCTG----TT--TG
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     2559 16 +      8497 T------T--T-C----T---T-----------T----------------A--CCTA----TT--TG
i Mirza_zaza.k141_226143                                I 1 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 143795 17 +    154973 T------T--T-T----T---T-----------A----------------AA-CTTT----TT--TG
i Monodon_monoceros.MonMon_M_scaffold_5598              I 2 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                158648 12 +    265003 -----------------T---T-----------C----------------A--CCTA----TT--TG
i Mormoops_blainvillei.MorMeg_scaffold_2952             I 3 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 2039 17 -      4346 T------C--T-T----T---T-----------A----------------AA-CTTA----TT--TA
i Moschus_moschiferus.MosMos_scaffold_146101            I 4 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  141744 14 -    168139 ----------T-T----T---T-----------T----------------A--CCTG----TT--TC
i Mungos_mungo.MunMun_flattened_line_8729               I 7 C 0
s Murina_feae.MurFea_scaffold_2254                          16540 16 -    100666 ----------T-T----TCTTT-----------T----------------A--CCTG----T---TG
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70763057 31 +  92629107 t------g--t-t----t---t-----------tgttgttgttgttgttta--ttaa----tC--T-
i Mus_caroli.LT608236.1                                 I 2 C 0
s Mus_musculus.chr16                                     75486137  8 +  98207768 --------------------------------------------------t--ttta----tc--t-
i Mus_musculus.chr16                                    I 11 C 0
s Mus_pahari.LT608305.1                                  67552295 11 +  89017189 T------C--T-T----T---T-----------T----------------A--TCT-----------
i Mus_pahari.LT608305.1                                 I 2 C 0
s Mus_spretus.CM004110.1                                 74327313  8 +  97876770 --------------------------------------------------t--taaa----tc--t-
i Mus_spretus.CM004110.1                                I 11 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              8162 12 +     98495 -----------------T---T-----------T----------------A--TATG----TT--TT
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 2 C 0
s Mustela_putorius.JH417978.1                             4420985 14 -  28371801 ----------t-a----a---a-----------a----------------a--ctta----tt--ta
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     87110 14 -    117718 ------------T---CT---T-----------T----------------G--CCTG----CT--TT
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 4 C 0
s Myotis_brandtii.KE161952.1                               964866 17 +   8389877 ----------t-t----tcttt-----------t----------------a--cctg----tt--TG
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5016541 17 +   6462685 ----------t-t----tcttt-----------t----------------a--cctg----tt--ta
i Myotis_davidii.KB114863.1                             I 6 C 0
s Myotis_lucifugus.GL429887.1                             3462452 17 -   3747815 ----------t-t----tcttt-----------t----------------a--cctg----tt--tg
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         7641 17 +     66751 ----------T-T----TCTTT-----------T----------------A--CCTG----TT--TG
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             2508 15 -      8794 T------A--C-C----C---T-----------T----------------A--CCTG----TT--A-
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        I 2 I 4
s Nannospalax_galili.KL201303.1                            107516 15 +    362372 T------C--C-C----T---T-----------T----------------A--CCTG----TC--T-
i Nannospalax_galili.KL201303.1                         I 9 C 0
s Nasalis_larvatus.k141_153429                               4835 16 +     48152 T------T--A-C----T---C-----------T----------------A--TCTG----TT--TG
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4481722 14 -  14209539 ----------t-t----t---t-----------t----------------a--cctg----tt--tg
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3948404 17 -   4490290 t------t--t-t----t---t-----------a----------------a-acttt----tt--tg
i Neophocaena_asiaeorientalis.KZ688543.1                I 2 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  46765 12 +     94413 -----------------T---T-----------T----------------A--CCTA----TT--TG
i Noctilio_leporinus.NocLep_scaffold_12062              I 3 C 0
s Nomascus_annamensis.k141_1223136                          10615 16 -     11253 T------T--A-C----T---T-----------T----------------A--CGTG----TT--TG
i Nomascus_annamensis.k141_1223136                      C 0 C 0
s Nomascus_concolor.k141_468488                              1258 16 -      1482 T------T--A-C----T---T-----------T----------------A--CGTG----TT--TG
i Nomascus_concolor.k141_468488                         C 0 C 0
s Nomascus_gabriellae.k141_906566                            1247 16 -      2544 T------T--A-C----T---T-----------T----------------A--CGTG----TT--TG
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             21721 16 -  18771707 T------T--A-C----T---T-----------T----------------A--CGTG----TT--TG
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_844529                                   995 16 +      2124 T------T--A-C----T---T-----------T----------------A--CGTG----TT--TG
i Nomascus_siki_a.k141_844529                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                27171 14 +   3668941 ----------t-t----t---t-----------t----------------a--cctg----tt--tG
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65564010 16 -  95554990 G------T--T-C----T---T-----------T----------------A--CATA----TT--TG
i Nycticebus_bengalensis.LG16                           I 2 C 0
s Nycticebus_coucang.k141_2051882                             855 16 +      6470 G------T--T-C----T---T-----------T----------------A--CATA----TT--TG
i Nycticebus_coucang.k141_2051882                       I 2 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65666379 16 +  89412551 A------T--T-C----T---T-----------T----------------A--CATA----TT--TG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     I 2 C 0
s Ochotona_princeps.JH802095.1                            4992996 16 -  23139505 t------t--t-a----t---t-----------t----------------g--aata----tt--tc
i Ochotona_princeps.JH802095.1                          I 2 C 0
s Odobenus_rosmarus.KB229369.1                             676380 14 -   3126709 ----------t-t----t---t-----------t----------------a--cctg----tt--tg
i Odobenus_rosmarus.KB229369.1                          I 2 C 0
s Odocoileus_virginianus.KZ101650.1                       1077162 17 +   1425656 t------c--t-t----t---t-----------a----------------a-actta----tt--tg
i Odocoileus_virginianus.KZ101650.1                     I 4 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         34326 17 +     78940 T------C--T-T----T---T-----------A----------------AA-CTTA----TT--TG
i Okapia_johnstoni.LVCL01S0017931.1                     I 4 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  121669 10 +    145789 ---------------------T-----------T----------------A--TCTA----TC--T-
i Ondatra_zibethicus.OndZib_scaffold_6821               I 3 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  33607 15 +     62360 G------C--T-T----T---T-----------T----------------A--TCTA----TC--T-
i Onychomys_torridus.OnyTor_scaffold_12578              I 2 C 0
s Orcinus_orca.KB316965.1                                 7222088 16 -   7562323 t------t--t-t----t---t-----------a----------------a-a-ttt----tt--tg
i Orcinus_orca.KB316965.1                               I 2 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              40549 15 -     66828 T------T--T-C----T---T-----------T----------------A--CCGA----TT--T-
i Orycteropus_afer.OryAfe_flattened_line_13509          I 2 C 0
s Oryctolagus_cuniculus.CM000803.1                      141872670 16 + 163896628 t------t--c-t----t---t-----------t----------------g--caCA----TT--TA
i Oryctolagus_cuniculus.CM000803.1                      I 2 I 3
s Otocyon_megalotis.JAEUCK010005121.1                      304507 14 -    505867 ----------t-t----t---t-----------t----------------a--cctg----tt--tG
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       36020 16 +     38679 G------T--T-C----T---T-----------G----------------A--GATA----TT--TG
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18005461 16 -  38779656 G------T--T-C----T---T-----------G----------------a--gata----tt--tg
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134074742 17 - 275406953 t------c--t-t----t---t-----------a----------------a-acTTA----CT--TG
i Ovis_aries.CM001582.2                                 I 4 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      75956 17 +    140051 T------C--T-T----T---T-----------A----------------AA-CTTA----CT--TG
i Ovis_canadensis.OviCan_scaffold_6251                  I 4 C 0
s Pan_paniscus.CM003386.1                               127571484 16 - 205426864 t------t--a-c----t---t-----------t----------------a--cctG----TT--TG
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120148637 16 - 196562556 t------t--a-c----t---t-----------t----------------a--cctG----TT--TG
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  30959 14 +    295523 ----------T-T----T---T-----------T----------------A--CCTG----TT--TC
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3634562 14 +  18214204 ----------T-T----T---T-----------T----------------A--CCTG----TT--TC
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5024340 14 -   6340057 ----------t-t----t---t-----------t----------------a--CCTG----TT--TC
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1063600 17 -   1292953 t------c--t-t----t---t-----------a----------------a-actta----tt--tg
i Pantholops_hodgsonii.KE114631.1                       I 4 C 0
s Papio_anubis.CM001492.2                               188152582 16 - 188283584 T------T--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            48794 16 +     76494 T------T--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47509979 16 +  47705337 T------T--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 63961 16 -    104429 T------T--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  13747 16 -     29451 T------T--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                34150 16 +     35859 T------T--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    112523 14 -    135482 ----------T-T----T---T-----------T----------------A--CCTG----TT--TC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           2079  3 -     23713 --------------------------------------------------------------T--TG
i Perodicticus_ibeanus.k141_117958                      I 6 C 0
s Perodicticus_potto.k141_713187                            21377  3 -     27972 --------------------------------------------------------------T--TG
i Perodicticus_potto.k141_713187                        I 6 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      39971 16 -     45160 T------T--T-C----T---G-----------T----------------A--CCTA----TT--TT
i Perognathus_longimembris.PerPac_flattened_line_22291  I 2 C 0
s Peromyscus_maniculatus.KI615518.1                       4946780 15 -   8017169 T------C--T-T----T---T-----------T----------------G--TCTA----TC--T-
i Peromyscus_maniculatus.KI615518.1                     I 4 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            118706 17 -    122454 T------T--T-T----T---T-----------A----------------AA-CTTG----TT--TG
i Phocoena_phocoena.PhoPho_flattened_line_11948         I 2 C 0
s Piliocolobus_badius.k141_1497351                           1835 16 -      3310 T------T--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       21741 16 -     82327 T------T--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           18493 16 +     19957 T------T--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26736502 16 +  26888534 T------T--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            93639 11 +    112873 ---------------------T-----------A----------------A--TCTG----TT--TG
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        I 8 C 0
s Pithecia_albicans.k141_991845                             40487 12 -     61926 -----------------T---T-----------T----------------A--CCTG----TT--TG
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        21916 12 +     78826 -----------------T---T-----------T----------------A--CCTG----TT--TG
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              5867 12 -     15800 -----------------T---T-----------T----------------A--CCTG----TT--TG
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                         9065 12 -     16101 -----------------T---T-----------T----------------A--CCTG----TT--TG
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          2374 12 +      9673 -----------------T---T-----------T----------------A--CCTG----TT--TG
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13471368 12 -  19735023 -----------------T---T-----------T----------------A--CCTG----TT--TG
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           10276 12 -     31692 -----------------T---T-----------T----------------A--CCTG----TT--TG
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           2772 17 +     21690 T------T--T-T----T---T-----------A----------------AA-CTTA----TT--TG
i Platanista_gangetica.PlaMin_flattened_line_72990      I 2 C 0
s Plecturocebus_bernhardi.k141_959214                       19683 12 +     44506 -----------------T---T-----------T----------------A--CCTG----TT--TG
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        19893 12 +     67491 -----------------T---T-----------T----------------A--CCTG----TT--TG
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      10138 12 -     98129 -----------------T---T-----------T----------------A--CCTG----TT--TG
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     19739 12 +    147771 -----------------T---T-----------T----------------A--CCTG----TT--TG
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        19989 12 -     23762 -----------------T---T-----------T----------------A--CCTG----TT--TG
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                           455 12 -     55515 -----------------T---T-----------T----------------A--CCTG----TT--TG
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         19808 12 +    152463 -----------------T---T-----------T----------------A--CCTG----TT--TG
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      6568 12 +      8943 -----------------T---T-----------T----------------A--CCTG----TT--TG
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                          9528 12 +    134592 -----------------T---T-----------T----------------A--CCTG----TT--TG
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          20118 12 -     75465 -----------------T---T-----------T----------------A--CCTG----TT--TG
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              184030 16 -    373494 T------T--A-C----T---T-----------T----------------A--CCTG----TT--TG
i Pongo_abelii.NDHI03003816.1                           I 1 C 0
s Pongo_pygmaeus.ctg62                                   19803937 16 +  19899266 T------T--A-C----T---T-----------T----------------A--CCTG----TT--TG
i Pongo_pygmaeus.ctg62                                  I 1 C 0
s Presbytis_comata.k141_672698                               2073 16 -     15069 T------T--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Presbytis_comata.k141_672698                          I 1 C 0
s Presbytis_mitrata.k141_860013                              2207 16 +     14865 T------T--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Presbytis_mitrata.k141_860013                         I 1 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                73396 15 +     78963 T------T--T-C----T---T-----------T----------------C--CCTG----TT--T-
i Procavia_capensis.ProCapCap_scaffold_15315            I 4 C 0
s Prolemur_simus.MPIZ01000048.1                           6845416 16 +  12164890 t------t--t-c----t---t-----------t----------------a--ccta----tt--tg
i Prolemur_simus.MPIZ01000048.1                         I 2 C 0
s Propithecus_coquerelli.NW_012147863.1                     13873 16 -     30946 t------t--t-c----t---t-----------t----------------a--ccTA----TT--TG
i Propithecus_coquerelli.NW_012147863.1                 I 7 C 0
s Propithecus_coronatus.k141_1353159                          556 16 +     11805 T------T--T-C----T---T-----------T----------------A--CCTA----TT--TG
i Propithecus_coronatus.k141_1353159                    I 7 C 0
s Propithecus_diadema.k141_577245                           39892 16 +     52369 T------T--T-C----T---T-----------T----------------A--CCTA----TT--TG
i Propithecus_diadema.k141_577245                       I 7 C 0
s Propithecus_edwardsi.k141_1317105                         32280 16 -     44753 t------t--t-c----t---t-----------t----------------a--ccta----tt--tg
i Propithecus_edwardsi.k141_1317105                     I 8 C 0
s Propithecus_perrieri.k141_7554                            14201 16 +     27322 T------T--T-C----T---T-----------T----------------A--CCTA----TT--TG
i Propithecus_perrieri.k141_7554                        I 7 C 0
s Propithecus_tattersalli.k141_907138                       13840 16 -     53241 t------t--t-c----t---t-----------t----------------a--ccta----tt--tg
i Propithecus_tattersalli.k141_907138                   I 7 C 0
s Propithecus_verreauxi.k141_158021                         36112 16 -     48185 t------t--t-c----t---t-----------t----------------a--ccta----tt--tg
i Propithecus_verreauxi.k141_158021                     I 8 C 0
s Psammomys_obesus.NESX01026517.1                           30173  7 +     77221 -----------------------------------------------------TTTA----TC--G-
i Psammomys_obesus.NESX01026517.1                       I 4 C 0
s Pteronotus_parnellii.KE867983.1                            1315 12 -     27784 -----------------T---T-----------T----------------A--CCTA----TT--TA
i Pteronotus_parnellii.KE867983.1                       I 3 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        242865 14 -    344369 ----------T-T----T---A-----------A----------------A--CCTA----TT--TA
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13243434 14 -  17261082 ----------c-c----t---T-----------C----------------A--CCTG----TT--TG
i Pteropus_alecto.KB031157.1                            I 1 C 0
s Pteropus_vampyrus.KN525959.1                             601387 14 -   3946241 ----------c-c----t---T-----------C----------------A--CCTG----TT--TG
i Pteropus_vampyrus.KN525959.1                          I 1 C 0
s Puma_concolor.QAVW01000427.1                          131531152 18 - 161321710 ----------t-tttttt---t-----------t----------------a--cctg----tt--tc
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             26198 16 +     56732 T------T--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6802689 16 +   6970761 T------T--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             2082 16 +     18040 T------T--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                13248 17 +     68503 T------C--T-T----T---T-----------A----------------AA-CTTA----TT--TG
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 4 C 0
s Rattus_norvegicus.chr11                                13912215 15 +  90463843 T------C--T-T----T---T-----------T----------------A--TCTA----TC--A-
i Rattus_norvegicus.chr11                               I 2 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1785050 18 +   2252614 ----------c-c----t---t-----------t----------------a--cctgtctgtc--tg
i Rhinolophus_sinicus.LVEH01000179.1                    I 1 C 0
s Rhinopithecus_bieti.k119_102124                           12635 16 -     14454 T------T--A-C----T---T-----------T----------------A--TTTG----TT--TG
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206373961 16 - 206558726 T------T--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44851609 16 -  45163003 T------T--A-C----T---T-----------T----------------A--TTTG----TT--TG
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                16736 14 +    109198 ----------C-C----T---T-----------C----------------A--CCTG----TT--TG
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            I 1 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       5030 17 +     12214 T------C--T-T----T---T-----------A----------------AA-CTTA----TT--TG
i Saiga_tatarica.SaiTat_scaffold_82192                  I 4 C 0
s Saimiri_boliviensis.NW_024100938.1                     15669576 16 -  43202129 T------T--A-C----T---T-----------T----------------A--CCTG----TT--TG
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        1442 16 +     34089 T------T--A-C----T---T-----------T----------------A--CCTG----TT--TG
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              1385 16 -     60842 T------T--A-C----T---T-----------T----------------A--CCTG----TT--TG
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              1462 16 +     67014 T------T--A-C----T---T-----------T----------------A--CCTG----TT--TG
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              1458 16 +     60816 T------T--A-C----T---T-----------T----------------A--CCTG----TT--TG
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 1395 16 -     76454 T------T--A-C----T---T-----------T----------------A--CCTG----TT--TG
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17337919 16 -  30362882 T------T--A-C----T---T-----------A----------------A--CCTG----TT--TG
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         17519 16 -     62485 T------T--A-C----T---T-----------T----------------A--CCTG----TT--TG
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   28788 24 -    114521 TTTATTTG--G-T----T---GCATATGTGTAAT---------------------------------
i Scalopus_aquaticus.ScaAqu_scaffold_9300               I 2 I 9
s Semnopithecus_entellus.k141_1527475                       24623 16 +     26421 T------T--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       5083 16 +     20762 T------T--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         38818 16 +     40653 T------T--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                            9375 16 -     12194 T------T--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     22797 16 -     27512 T------T--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         31816 16 -     33692 T------T--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   96395 15 -    120886 T------C--C-T----T---T-----------C----------------A--TCTA----TC--T-
i Sigmodon_hispidus.SigHis_scaffold_11332               I 2 C 0
s Sorex_araneus.JH798170.1                               17747692  7 -  27805282 ------------------------------------------------------CTG----CC--TG
i Sorex_araneus.JH798170.1                              I 11 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            15306  7 +    739146 T------G--T-T----T---T-----------T---------------------------------
i Solenodon_paradoxus.SolPar_flattened_line_1012        I 2 I 2
s Spermophilus_dauricus.KZ294190.1                        2236971 16 +   2842873 c------a--t-c----t---t-----------t----------------a--cCTC----TA--TT
i Spermophilus_dauricus.KZ294190.1                      I 2 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             231845 14 -    276980 ----------T-T----T---T-----------A----------------G--CCTA----CT--TG
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            24408 14 +     62062 ----------T-T----T---T-----------T----------------A--CCTG----TT--TC
i Suricata_suricatta.SurSur_flattened_line_20339        I 2 C 0
s Sus_scrofa.CM000824.4                                 189269308 18 + 218635234 G------G--T-T----T---T-----------A----------------AAACACA----TT--TG
i Sus_scrofa.CM000824.4                                 I 2 C 0
s Symphalangus_syndactylus.tarseq_24                     13898780 16 +  13920577 T------T--G-C----T---T-----------G----------------A--CGTG----TT--TG
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               3255 16 -      6213 T------A--T-T----T---T-----------T----------------T--CCTG----TT--TG
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               12188  9 +     45698 ---------------------------------T----------------A--CCTG----TT--A-
i Tamandua_tetradactyla.TamTet_scaffold_26877           I 7 I 4
s Tapirus_indicus.TapInd_scaffold_176                      804182 14 +   1148477 ----------C-C----T---T-----------T----------------A--CCTG----TT--AG
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  54842 14 +     99546 ----------C-C----T---T-----------T----------------A--CCTG----TT--AG
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               23514 13 +     42269 ------------T----T---T-----------A----------------A--CTTG----TT--TA
i Tarsius_lariang.k141_609102                           I 2 C 0
s Tarsius_wallacei.k141_48636                               56830 13 +     65473 ------------T----T---T-----------A----------------A--CTTG----TT--TA
i Tarsius_wallacei.k141_48636                           I 2 C 0
s Theropithecus_gelada.CM009951.1                       194004118 16 - 194193292 T------T--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  1027 16 +      6782 G------A--T-T----C---T-----------A---------------AA--CCTG----TT--T-
i Tolypeutes_matacus.TolMat_scaffold_269431             I 2 I 41
s Tonatia_saurophila.TonSau_scaffold_3334                  133321 12 -    259118 -----------------T---T-----------T----------------A--CCAA----TT--TG
i Tonatia_saurophila.TonSau_scaffold_3334               I 3 C 0
s Trachypithecus_auratus.k141_738098                        23193 16 +     38948 T------T--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   16920 16 -     32910 T------T--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       22818 16 +     24652 T------T--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      1696 16 -      3559 T------T--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           39642 16 -     54611 T------T--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       15641 16 +     17312 T------T--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    23004 16 -     25040 T------T--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          1670 16 +      3528 T------T--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  48032 16 +     51589 T------T--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       11208 16 +     14732 T------T--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       1685 16 -     28054 T------T--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44656480 16 -  44834318 T------T--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        1490 16 +      3372 T------T--A-C----T---T-----------T----------------A--TCTG----TT--TG
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   2659 17 +     90398 T------A--G-T----T---T-----------A----------------AA-CTTA----TT--TG
i Tragulus_javanicus.TraJav_scaffold_14717              I 7 C 0
s Trichechus_manatus.JH594618.1                          16078770 15 +  31416278 t------t--t-c----t---t-----------t----------------a--ccTG----TT--T-
i Trichechus_manatus.JH594618.1                         I 3 C 0
s Tupaia_chinensis.KB320831.1                             2788622  8 -   3938065 -----------------------------------------------------tcta----tt--tg
i Tupaia_chinensis.KB320831.1                           I 6 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    1159  8 +     13056 -----------------------------------------------------TCTA----TT--TG
i Tupaia_tana.TupTan_flattened_line_68454               I 6 C 0
s Tursiops_truncatus.MRVK01000923.1                      69310806 17 -  96451834 t------t--t-t----t---t-----------a----------------a-acttt----tt--tg
i Tursiops_truncatus.MRVK01000923.1                     I 2 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 23983 18 -     25548 C------A--T-T----T---TCATACACATAAT---------------------------------
i Uropsilus_gracilis.UroGra_scaffold_4143_0             I 2 I 9
s Ursus_maritimus.KK498671.1                              6511423 14 +  28682327 ----------t-t----t---t-----------t----------------a--cctg----tt--tg
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  2256 16 -     20643 t------t--t-c----t---t-----------t----------------A--CCTA----TT--TG
i Varecia_rubra.k141_432109                             I 1 C 0
s Varecia_variegata.k141_775891                             21800 16 -     33872 t------t--t-c----t---t-----------t----------------A--CCTA----TT--TG
i Varecia_variegata.k141_775891                         I 1 C 0
s Vicugna_pacos.KN269600.1                                1522119 17 -   2331223 g------t--t-t----t---t-----------t----------------a-actta----ct--tG
i Vicugna_pacos.KN269600.1                              I 2 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                134577 14 -    281493 ----------T-T----T---T-----------T----------------A--CCTG----TT--TG
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       124074 16 -    134049 T------G--T-C----T---T-----------T----------------A--CCTG----TA--TT
i Xerus_inauris.XerIna_scaffold_7898                    I 2 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        211105 14 -    227762 ----------T-T----T---T-----------T----------------A--CCTG----TT--TG
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     12308  9 -     20485 T------G--T-T----T---T-----------T----------------A--T-------------
i Zapus_hudsonius.ZapHud_scaffold_64392                 I 2 I 2
s Ziphius_cavirostris.ZipCav_flattened_line_127025           4308 17 -      8775 T------T--T-T----T---T-----------A----------------AA-CTTA----TT--TG
i Ziphius_cavirostris.ZipCav_flattened_line_127025      I 2 C 0
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16291  1 -    119109 I
e Octodon_degus.JH651621.1                                3678743 1836 +  10294119 I
e Heterocephalus_glaber.JH602058.1                        2548028 229 +  31725842 I
e Fukomys_damarensis.KN123630.1                          13889876  0 -  19261668 C
e Dolichotis_patagonum.DolPat_scaffold_14102                33375  0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             56104 16 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                14631 16 +     26546 I
e Cavia_tschudii.CavTsc_scaffold_488                       173989  0 +    436027 C
e Cavia_porcellus.DS562889.1                             15795798  0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15783848 16 -  24422027 I

a score=0.000000
s hg38.chr4_GL000008v2_random                                8756 18 +    209709 GGT-A----------TGT----AG-----T--TA----C---------TA----TT-----T
s Acinonyx_jubatus.LLWD01000356.1                         2030830 20 +   3721120 tG-TA----------TGTGTA--C-----T--TA----C---------TA----TC-----T
i Acinonyx_jubatus.LLWD01000356.1                       C 0 I 6
s Acomys_cahirinus.AcoCah_scaffold_1625                    109110 20 -    189883 CA-GC----------TGGGGT--G-----T--TG----C---------TA----TT-----T
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 7 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10654163 20 +  23371972 tg-ta----------tgtgta--c-----t--tA----C---------TA----TC-----T
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 I 4
s Ailurus_fulgens.LNAC01000003.1                          7090895 20 -  16596857 TG-TA----------TATGTA--C-----T--TA----T---------GA----TC-----T
i Ailurus_fulgens.LNAC01000003.1                        C 0 I 4
s Allactaga_bullata.AllBul_scaffold_70162                    9647 20 -     22067 AA-TA----------TGTGCA--A-----T--TA----C---------TC----TT-----T
i Allactaga_bullata.AllBul_scaffold_70162               I 702 C 0
s Allenopithecus_nigroviridis.k141_3103707                  59770 18 +     61638 AA-TA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        51578 18 +     53391 AA-TA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         2302 18 +     72529 AA-TA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          1878 18 +      3797 AA-TA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             7056 18 -     18050 AA-TA----------TAT----AG-----T--TA----T---------TA----TT-----T
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  8167 18 -     11521 AA-TA----------TAT----AG-----T--TA----T---------TA----TT-----T
i Alouatta_caraya.k141_5460                             I 4 C 0
s Alouatta_discolor.k141_811576                              7733 18 -     21359 AA-TA----------TAT----AG-----T--TA----T---------TA----TT-----T
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1856473                                6110 18 +      7227 AA-TA----------TAT----AG-----T--TA----T---------TA----TT-----T
i Alouatta_juara.k141_1856473                           I 4 C 0
s Alouatta_macconnelli.k141_1331706                          7024 18 -     10438 AA-TA----------TAT----AG-----T--TA----T---------TA----TT-----T
i Alouatta_macconnelli.k141_1331706                     I 4 C 0
s Alouatta_nigerrima.k141_2718643                            3679 18 +      7047 AA-TA----------TAT----AG-----T--TA----T---------TA----TT-----T
i Alouatta_nigerrima.k141_2718643                       I 4 C 0
s Alouatta_palliata.k141_1316127                             6966 18 +     10410 AA-TA----------TAT----AG-----T--TA----T---------TA----TT-----T
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                             769 18 -      4927 AA-TA----------TAT----AG-----T--TA----T---------TA----TT-----T
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             3697 18 +      6429 AA-TA----------TAT----AG-----T--TA----T---------TA----TT-----T
i Alouatta_seniculus.k141_990213                        I 4 C 0
s Ammotragus_lervia.NIVO01013474.1                        3517588 20 +   4113121 TC-CC----------CATATA--G-----T--ta----c---------ta----tt-----t
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      387781 20 -    631301 TG-TG----------TGAGTA--G-----T--TA----A---------TA----TT-----T
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            28221 20 +     33004 TC-CC----------CAGATA--G-----T--TA----C---------CA----TT-----T
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 59428 11 +     78111 --------------------------------------T---------TA----TTTATTTC
i Aotus_azarae.k141_3170768                             I 12 C 0
s Aotus_griseimembra.k141_3275623                            2356 10 +     22701 ------------------------------------------------TA----TTTATTTC
i Aotus_griseimembra.k141_3275623                       I 10 C 0
s Aotus_nancymaae.KZ196176.1                              5746313 11 +   9889416 --------------------------------------t---------ta----tttatttc
i Aotus_nancymaae.KZ196176.1                            I 9 C 0
s Aotus_trivirgatus.k141_1740727                             2885 23 -    104377 AA-TA----------TAT----AG-----T--TA----T---------TA----TTTATTTC
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               2894 13 +     23246 AA-TA----------TAT----AGTTA--T--------------------------------
i Aotus_vociferans.k141_718647                          C 0 I 10
s Aplodontia_rufa.AprRuf_scaffold_156013                      946 20 +      5067 TA-TA----------CATGTA--C-----T--TA----C---------TG----TT-----T
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      14886 19 +     17483 TG-TA----------TAT-TT--T-----C--CT----C---------CA----CA-----T
i Arctocebus_calabarensis.k141_1161114                  I 3 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 5923 20 -     29036 TG-TG----------GGAGTA--G-----T--TA----A---------TA----TT-----C
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9536157 18 +  39197703 AA-TA----------TAC----AG-----T--TA----T---------TA----TT-----T
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             57441 18 +     85812 AA-TA----------TAC----AG-----T--TA----C---------TA----TT-----T
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 8440 18 +     89302 AA-TA----------TAC----AG-----T--TA----C---------TA----TT-----T
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             12950 18 -     58268 AA-TA----------TAC----AG-----T--TA----T---------TA----TT-----T
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             60936 18 +    119057 AA-TA----------TAC----AG-----T--TA----C---------TA----TT-----T
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               2887 18 -     25888 AA-TA----------TAC----AG-----T--TA----T---------TA----TT-----T
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 3645 20 -     16375 TG-TA----------TATTTA--G-----T--TA----C---------TA----TT-----T
i Avahi_laniger.k141_2840928                            C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26377541 20 +  51448160 tc-CA----------TGTAGA--G-----t--ta----c---------ta----tt-----t
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        2772 20 -     13118 TC-CA----------TGTAGA--G-----t--ta----c---------ta----tt-----t
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   40688 22 -     72089 TC-CC----------CATATA--G-----TTTTA----C---------TA----TT-----T
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6556832 20 +   6870073 TC-CC----------CATATA--G-----C--TA----C---------CA----TT-----t
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138137067 20 - 161108492 TC-CC----------CATATA--G-----C--TA----C---------CA----TT-----t
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     569444 20 -    998990 TC-CC----------CATATA--G-----C--TA----C---------CA----TT-----T
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136292800 20 - 158972876 tc-cC----------CATATA--G-----C--TA----C---------CA----TT-----t
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1228420 20 -   1914593 TC-CC----------CATATA--G-----C--Ta----c---------ca----tt-----t
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               110786 18 -    171031 AA-TA----------TAT----AG-----T--TA----T---------TA----TT-----T
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                  9812 18 +    125063 AA-TA----------TAT----AG-----T--TA----T---------TA----TT-----T
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                11860 18 -    216513 AA-TA----------TAT----AG-----T--TA----T---------TA----TT-----T
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        4400 18 -    134917 AA-TA----------TAT----AG-----T--TA----T---------TA----TT-----T
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3217057 20 -   8989139 tc-GA----------AGTATA--G-----C--TA----C---------TA----TT-----T
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           394761 20 -  15254737 tc-GA----------AGTATA--G-----C--TA----C---------TA----TT-----T
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2970495 20 +   6889770 tc-GA----------AGTATA--G-----C--TA----C---------TA----TT-----T
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11515546 14 +  39901454 TA-AA----------AGTGTA--C-----T--TA----------------------------
i CanFam4.chr31                                         C 0 I 6
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   10563 14 +     87036 TA-AA----------AGTGTA--C-----T--TA----------------------------
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 I 6
s Canis_lupus_dingo.QKWQ01001993.1                       11262205 14 -  35597290 TA-AA----------AGTGTA--C-----T--TA----------------------------
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 I 6
s Canis_lupus_familiaris.chr31                           11084734 14 +  39895921 TA-AA----------AGTGTA--C-----T--TA----------------------------
i Canis_lupus_familiaris.chr31                          C 0 I 6
s Canis_lupus_orion.HG994411.1                           16451768 14 -  44759192 TA-AA----------AGTGTA--C-----T--TA----------------------------
i Canis_lupus_orion.HG994411.1                          C 0 I 6
s Capra_aegagrus.CM003214.1                              21322695 20 + 157394656 TC-CC----------CATATA--G-----T--ta----c---------ta----tt-----t
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135703922 20 - 157403528 TC-CC----------CATATA--G-----T--ta----c---------ta----tt-----t
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_647363                  1428  5 +      1887 -C-TA----------TG---------------------------------------------
i Capromys_pilorides.CapPil_scaffold_647363             C 0 C 0
s Carlito_syrichta.NW_007248099.1                          306046 20 +    345090 TG-TA----------TGAGT--AG-----T--TA----C---------TA----TC-----T
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               56962 20 +     67245 GA-TA----------GGAGTA--T-----T--TA----A---------TA----TT-----C
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   27452 20 +     33760 TG-CA----------TGTGTA--A-----T--AA----C---------TA----TT-----T
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   156259 20 -    276539 TG-CA----------TAGATA--G-----T--TA----C---------TA----TT-----T
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18887632 15 -  29618158 AA-TA----------TAT----AG-----T--TA----T---------TA------------
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 5176 15 -     26817 AA-TA----------TAT----AG-----T--TA----T---------TA------------
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                 9419 15 +     25043 AA-TA----------TAT----AG-----T--TA----T---------TA------------
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         5083 20 +     21754 TG-TA----------TGAGT--AG-----T--TA----T---------TA----TC-----T
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4360757 20 +   7569818 TA-TA----------AGGGTA--G-----T--TA----C---------TA----TT-----T
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623          512 20 -      9338 TA-TA----------AGGGTA--G-----T--TA----C---------TA----TT-----T
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6551566 18 +   6739814 AA-TA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      53043 18 -     54931 AA-TA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         18027 18 -     19697 AA-TA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         55558 18 -    107033 AA-TA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        1999 18 -      3853 AA-TA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          25932 18 +     30494 AA-TA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           1956 18 -      4022 AA-TA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          1849 18 -      3505 AA-TA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           20653 18 +     35983 AA-TA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11987175 18 +  12117833 AA-TA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46473928 18 +  46592721 AA-TA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      31755 18 +     33420 AA-TA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        1791 18 -      3443 AA-TA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      2782 18 -      4669 AA-TA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        2582 18 -      4411 AA-TA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         2107 18 -      4205 AA-TA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_1070855           327 21 -      1715 ----A----------TATGTA--T-----T--TA----A---------TATTAGTT-----T
i Chaetophractus_vellerosus.ChaVel_scaffold_1070855     I 4 C 0
s Cheirogaleus_major.k141_1157592                           55950 20 -     68416 TG-TA----------TATTTA--G-----T--TA----C---------TA----TT-----T
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            4996 20 +     13308 TG-TA----------TATTTA--G-----T--TA----C---------TA----TT-----T
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             2429 18 -     18223 AA-TA----------TAT----AG-----T--TA----T---------TA----TT-----T
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             19452 18 +     25473 AA-TA----------TAT----AG-----T--TA----T---------TA----TT-----T
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           38491 18 +     57117 AA-TA----------TAT----AG-----T--TA----T---------TA----TT-----T
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          43166 18 +     54541 AA-TA----------TAT----AG-----T--TA----T---------TA----TT-----T
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15958828  5 +  43084221 -A-TA----------TG---------------------------------------------
i Chinchilla_lanigera.JH721867.1                        C 0 I 6
s Chiropotes_israelita.k141_1189915                         68007 18 +    196370 AA-TA----------TAT----AG-----T--TA----T---------TA----TT-----T
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          12188 18 +     40510 AA-TA----------TAT----AG-----T--TA----T---------TA----TT-----T
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15135388 18 -  15256731 AA-TA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      30434 18 -     53260 AA-TA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101140883 18 + 101219884 AA-TA----------TGT----AG-----T--TA----C---------AA----TT-----T
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                13946 14 -     21363 -----------------------T-----T--TA----C---------TATTAGTT-----T
i Choloepus_didactylus.ChoDid_scaffold_36182            I 2 C 0
s Choloepus_hoffmanni.KN194586.1                           759252 14 +    964067 -----------------------t-----t--ta----c---------tattagtt-----t
i Choloepus_hoffmanni.KN194586.1                        I 2 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_141308              6039 17 -     12508 ----A----------TGTATC--A-----T--TA----C---------TA----TT-----T
i Chrysochloris_asiatica.ChrAsi_scaffold_141308         C 0 C 0
s Colobus_angolensis.KN985967.1                          10879462 18 +  10971483 AA-TA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147660620 18 + 156195979 AA-TA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            12607 18 +     23629 AA-TA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60610225 24 +  78930452 CA-TG----------TATATA--A-----T--TATGACT---------TA----TT-----T
i Condylura_cristata.JH655880.1                         I 9 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         36660 20 -     40477 TG-TA----------GGTGTA--G-----T--TA----G---------TA----TT-----T
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 I 4
s Cricetomys_gambianus.CriGam_scaffold_949                 274540 14 -    399297 -----------------AGCC--A-----C--TG----C---------TA----TT-----T
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53025733 20 +  72327488 TG-GA----------TTTG-AC-A-----C--CA----C---------TA----TT-----T
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             16982 20 -     19186 TG-CA----------TGTGTA--G-----C--TA----C---------TA----AT-----T
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            48855 20 -     70449 TG-TA----------TGTGTA--C-----T--CA----C---------TA----TC-----T
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 I 4
s Ctenodactylus_gundi.CteGun_scaffold_447                  205293  9 -    956709 -----------------------------T--AT----A---------TA----TT-----T
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 27483  5 -     67205 -C-CA----------TG---------------------------------------------
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          179136 21 -   6883506 ----A----------TATGTA--G-----T--TA----C---------TATTAGTT-----T
i Dasypus_novemcinctus.JH568778.1                       I 4 C 0
s Daubentonia_madagascariensis.ctg11                     16841818 20 +  31942871 TA-TA----------TATTTA--G-----T--TA----C---------TA----TT-----T
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80034287 20 -  96802777 cc-CA----------TGTATA--G-----t--ta----c---------ta----tt-----t
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18696275 20 -  18957592 TG-TA----------TGAGTA--G-----t--tt----a---------ta----tt-----t
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 319419 20 +    993696 TA-GA----------AGGGTA--G-----T--TA----C---------TA----TT-----T
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_170113                  677 20 +       818 TA-TA----------AGGGTA--G-----T--TA----C---------TA----TT-----T
i Diceros_bicornis.DicBicMic_scaffold_170113            C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   154694  5 +    228994 -A-TA----------TG---------------------------------------------
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3652443 17 +   4240102 ca-ta----------tatata--a-----t--ta----c---------ta------------
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 23997 17 +     28912 CA-TA----------TATATA--A-----T--TA----C---------TA------------
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Echinops_telfairi.JH980316.1                           22991532 17 -  44670279 ----A----------TGACTA--G-----T--TA----C---------TG----TT-----T
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                  9651 20 +     24177 TG-CA----------TGAATA--G-----T--TA----C---------TA----TT-----T
i Eidolon_helvum.KE772537.1                             C 0 I 4
s Elaphurus_davidianus.JRFZ01086400.1                     1488946 20 +   1727528 TC-CC----------CATATA--G-----C--Ta----c---------ca----tt-----t
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7803731 17 +  15467074 ----A----------TTTGTa--a-----c--ta----t---------tc----tt-----t
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        236199 20 -    369425 CA-GG----------TGTG-AC-A-----C--TG----C---------TA----TT-----T
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           3208 20 -      7838 CA-GG----------TGTG-AC-A-----C--TG----C---------TA----TT-----T
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85868616 20 +  99434291 tg-ta----------tgtgta--t-----t--ta----t---------ga----tC-----T
i Enhydra_lutris.KZ291749.1                             C 0 I 4
s Equus_asinus.JREZ01000062.1                             5850139 20 -   7175178 TG-CA----------AGAGTA--G-----T--TA----C---------TA----TT-----T
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13348642 20 +  41866177 TG-CA----------AGAGTA--G-----T--TA----C---------TA----TT-----T
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          10132 20 +     92910 TG-CA----------AGAGTA--G-----T--TA----C---------TA----TT-----T
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11529736 25 +  16010500 TG-TA----------TGTGTA--GCCAGGT--TA----C---------TT----TT-----T
i Erinaceus_europaeus.JH835290.1                        I 9 C 0
s Erythrocebus_patas.Contig8                             48767567 18 -  48907691 AA-TA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          312425 20 +    330699 TC-CA----------TGTATA--G-----T--TA----C---------TA----TT-----T
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             58854 20 +     89355 TC-CA----------TGTATA--G-----T--TA----C---------TA----TT-----T
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              2008 15 +     13586 TG-TA----------TATTTA--G-----T--GA----C-----------------------
i Eulemur_albifrons.k141_715837                         C 0 I 1
s Eulemur_collaris.k141_311830                               1943 15 -      6809 TG-TA----------TATTTA--G-----T--GA----C-----------------------
i Eulemur_collaris.k141_311830                          C 0 I 1
s Eulemur_coronatus.k141_3240342                             8416 15 +     36558 TG-TA----------TATTTA--G-----T--GA----C-----------------------
i Eulemur_coronatus.k141_3240342                        C 0 I 1
s Eulemur_flavifrons.k141_903901                             4731 15 +     60246 TG-TA----------TATTTA--G-----T--GA----C-----------------------
i Eulemur_flavifrons.k141_903901                        C 0 I 1
s Eulemur_fulvus.k141_653297                                 8220 15 +    109717 TG-TA----------TATTTA--G-----T--GA----C-----------------------
i Eulemur_fulvus.k141_653297                            C 0 I 1
s Eulemur_macaco.k141_1341545                               12593 15 +     16540 TG-TA----------TATTTA--G-----T--GA----C-----------------------
i Eulemur_macaco.k141_1341545                           C 0 I 1
s Eulemur_mongoz.k141_825972                                12870 15 +     27497 TG-TA----------TATTTA--G-----T--GA----C-----------------------
i Eulemur_mongoz.k141_825972                            C 0 I 1
s Eulemur_rubriventer.k141_411740                           15332 15 +     26808 TG-TA----------TATTTA--G-----T--GA----C-----------------------
i Eulemur_rubriventer.k141_411740                       C 0 I 1
s Eulemur_rufus.k141_1620292                                30060 15 +     46535 TG-TA----------TATTTA--G-----T--GA----C-----------------------
i Eulemur_rufus.k141_1620292                            C 0 I 1
s Eulemur_sanfordi.k141_186399                              12783 15 -     29447 TG-TA----------TATTTA--G-----T--GA----C-----------------------
i Eulemur_sanfordi.k141_186399                          C 0 I 1
s Felis_catus.CM001386.2                                129889808 20 - 159252932 tG-TA----------TGTGTA--C-----T--TA----C---------TA----TC-----T
i Felis_catus.CM001386.2                                C 0 I 6
s Felis_catus_fca126.CM031420.1                         129276882 20 - 158578461 tG-TA----------TGTGTA--C-----T--TA----C---------TA----TC-----T
i Felis_catus_fca126.CM031420.1                         C 0 I 6
s Felis_nigripes.FelNig_flattened_line_8080                 18017 20 +     52776 TG-TA----------TGTGTA--C-----T--TA----C---------TA----TC-----T
i Felis_nigripes.FelNig_flattened_line_8080             C 0 I 6
s Galago_moholi.ctg555                                     207967 10 -    847004 TG-TA----------TAT-TT--T--------------------------------------
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           10347 10 -     43889 TG-TA----------TAT-TT--T--------------------------------------
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           7397 19 +     27357 TG-TA----------TAT-TT--T-----C--TG----C---------CA----TC-----T
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               153274 20 +    324696 TG-TA----------TGTGTA--G-----T--TA----C---------TA----TT-----T
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    178471 20 -    189561 TC-CC----------CATATA--G-----T--ta----c---------ca----tt-----t
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                            9671 20 -     18683 TA-TG----------TGTGTT--G-----T--TA----C---------TA----TT-----T
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               2157 17 -     14630 AA--A----------TGT----AG-----T--TA----C---------TA----TT-----T
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119649256 17 - 195582420 AA--A----------TGT----AG-----T--TA----C---------TA----TT-----T
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   74222 20 +    118900 TC-TG----------TGTGTA--A-----T--TA----C---------TG----TT-----T
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                         2574 20 +      3980 TG-TA----------TATTTA--G-----T--TA----C---------TA----TT-----T
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             25049 20 +     26611 TG-TA----------TATTTA--G-----T--TA----C---------TA----TT-----T
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             2510 20 +     56096 TG-TA----------TATTTA--G-----T--TA----C---------TA----TT-----T
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        25785 20 -     42470 tg-ta----------tattta--g-----t--ta----c---------ta----tt-----t
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        42380 20 -     54384 tg-ta----------tattta--g-----t--ta----c---------ta----tt-----t
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              14063 20 +     53719 TA-TA----------TGTGTA--C-----T--CA----C---------TA----TC-----T
i Helogale_parvula.HelPar_flattened_line_22962          C 0 I 4
s Hemitragus_hylocrius.HemHyl_scaffold_16669                24957 20 -     91191 TC-CC----------CATATA--G-----T--TA----C---------TA----TT-----T
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               53547 17 +     73687 ----G----------TGTGTA--G-----T--TA----C---------TG----TT-----T
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              144537 20 +    277961 TC-CA----------TGTATA--G-----T--TA----C---------TA----TT-----T
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      275971 20 -    477199 TG-TA----------TGAGTA--G-----T--TA----C---------TA----CT-----T
i Hipposideros_armiger.JXIK01001085.1                   C 0 I 4
s Hipposideros_galeritus.HipGal_scaffold_104691              5129 20 -      9143 TG-TA----------TGAGTA--G-----T--TA----C---------TA----CT-----T
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 I 4
s Hoolock_leuconedys.ctg79                                        39 27 -   7690867 AA-TA----------TGT----AG-----T--TA----CCTGTTTGACTA----TT-----T
i Hoolock_leuconedys.ctg79                                 C 0 I 19
s Hyaena_hyaena.HyaHya_flattened_line_20729                 13131 20 -     67322 TG-TA----------TGTGTA--C-----T--CA----C---------TA----TC-----T
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 I 4
s Hylobates_abbotti.k141_493872                              1962 27 +      5897 AA-TA----------TGT----AG-----T--TA----CCTCTTTGACTA----TT-----T
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_282275                               1175 27 +      1846 AA-TA----------TGT----AG-----T--TA----CCTGTTCGACTA----TT-----T
i Hylobates_agilis.k141_282275                          C 0 C 0
s Hylobates_klossii.k141_584463                               339 27 -      1009 AA-TA----------TGT----AG-----T--TA----CCTGTTTGACTA----TT-----T
i Hylobates_klossii.k141_584463                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14621508 27 -  25970782 AA-TA----------TGT----AG-----T--TA----CCTGTTTGACTA----TT-----T
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1133650                            1397 27 -      2775 AA-TA----------TGT----AG-----T--TA----CCTGTTTGACTA----TT-----T
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             30000 27 -     60944 AA-TA----------TGT----AG-----T--TA----CCTGTTTGACTA----TT-----T
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     3179 20 +     22540 TG-TA----------TGCATA--A-----T--TA----C---------TA----TT-----C
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7123067 20 +  13083262 TA-TA----------CATGTA--C-----C--CA----C---------TC----TT-----T
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_1884019                                    241 20 -      2196 tg-ta----------tattta--g-----t--ta----c---------ta----tt-----t
i Indri_indri.k141_1884019                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               6213 20 +     17520 TC-CA----------TGTATA--G-----T--TA----C---------TA----TT-----T
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8562333 20 +  11848649 AA-TA----------TGTGCA--G-----T--TA----C---------TC----TT-----T
i Jaculus_jaculus.JH725517.1                            I 426 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               21046 18 +     37189 TC-CA----------TGT--A--G-----T--TA----C---------TA----TT-----T
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          47010 18 -    147782 AA-TA----------TAT----AG-----T--TA----T---------TA----TT-----T
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   111043 20 -    115756 TG-TA----------TAAGTA--G-----T--TA----C---------TA----TT-----G
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258404058 20 - 285822530 TG-TA----------TATTTA--G-----T--TA----C---------TC----TT-----T
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        20943 20 +     39228 TG-TA----------TATTTA--G-----T--TA----C---------TA----TT-----T
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            50316 20 +     63517 TG-TA----------TATTTA--G-----T--TA----C---------TA----TT-----T
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        75537 20 +    116806 TG-TA----------TATTTA--G-----T--TA----C---------TA----TA-----T
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     28581 20 -     33031 tg-ta----------tattta--g-----t--ta----c---------ta----tt-----t
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3082835 20 -   3498232 tg-ta----------tgtgta--c-----t--ta----c---------aa----tc-----t
i Leptonychotes_weddellii.KB714749.1                    C 0 I 4
s Lepus_americanus.LepAme_scaffold_62849                    10040 16 +     22452 ---------------TGCGTA--A-----T--TG----C---------TA----TT-----T
i Lepus_americanus.LepAme_scaffold_62849                I 3 C 0
s Lipotes_vexillifer.KE558548.1                            133389 20 +   3060487 tc-ca----------TGTATA--G-----t--ta----c---------ta----tt-----t
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19244654 18 +  19376315 AA-TA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            7697 19 +     84689 TG-TA----------TAT-TT--T-----C--TG----C---------CA----TA-----T
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3775448 19 +   6799190 TG-TA----------TAT-TT--T-----C--TG----C---------CA----TA-----T
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20588307 17 -  62548349 ----A----------TGTACG--G-----T--TA----C---------TG----TT-----T
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11084190 14 +  39895028 TA-AA----------AGTGTA--C-----T--TA----------------------------
i Lycaon_pictus.CM007556.1                              C 0 I 6
s Macaca_arctoides.k141_2201161                             16337 18 +     74745 AA-CA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12702843 18 +  12821369 AA-CA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               4939 18 +      6569 AA-CA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           43241 18 +     63263 AA-CA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_1068107                               11817 18 +     12679 AA-CA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                1390 18 +      3017 CA-CA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  43002 18 -     79256 AA-CA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196031920 18 + 196197964 AA-CA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11442026 18 +  11645122 AA-CA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   1949 18 -     46448 AA-CA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                1780 18 -      3617 AA-CA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 12112 18 -     55006 AA-CA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43837149 18 +  43892939 CA-CA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                4371 18 -      5978 AA-CA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               1954 18 -     27140 AA-CA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43433814 18 -  43563597 AA-TA----------TGT----AG-----T--TG----C---------TA----TT-----T
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4446640 18 -   4543643 AA-TA----------TGT----AG-----T--TG----C---------TA----TT-----T
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            143451 10 +    252755 -----------------------g-----t--ta----c---------ta----tt-----t
i Manis_javanica.JSZB01003966.1                         I 4 I 126
s Manis_pentadactyla.KN017078.1                             33515 20 +     58827 tg-ta----------tatgta--g-----t--ta----c---------ta----tt-----t
i Manis_pentadactyla.KN017078.1                         C 0 I 126
s Marmota_marmota.CZRN01000005.1                         36870911 20 +  64221397 TA-TA----------CATGTA--C-----C--CA----C---------TA----TT-----T
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       61720 20 -    234502 TG-TA----------TGAGTA--G-----T--CA----C---------TA----TT-----T
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 I 4
s Mellivora_capensis.MelCap_flattened_line_1828            226110 20 -    226874 TG-TA----------TGTGTA--T-----T--TA----T---------GA----TC-----T
i Mellivora_capensis.MelCap_flattened_line_1828         C 0 I 4
s Meriones_unguiculatus.MerUng_scaffold_52233                8652 19 +     15977 CA-GG----------TATG-AT-G-----C--TG----T---------TA----TT------
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1043462 20 -  26018355 TG-GT----------TTTG-AC-A-----C--TG----C---------TA----TT-----T
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_183284                   1084 20 +      2166 TC-CA----------TGTATA--C-----T--TA----C---------AA----TT-----T
i Mesoplodon_bidens.MesBid_scaffold_183284              C 0 C 0
s Microcebus_murinus.CM007691.1                          16507170 20 +  47401472 TG-TA----------TATTTA--G-----T--TA----C---------TA----TT-----T
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  28480 17 -     48017 ----A----------TGACTA--G-----T--AA----C---------TG----CT-----T
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               20126 16 -     32043 ---------------TTAGTA--G-----T--TA----A---------TA----TT-----T
i Micronycteris_hirsuta.MicHir_scaffold_37978           I 3 C 0
s Microtus_ochrogaster.CM001673.1                        22816345 20 -  98408828 CA-GG----------TGTG-AC-A-----G--TG----C---------AA----TT-----T
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8206891 20 +  10048721 TG-TA----------TGAGTA--G-----T--TA----C---------TA----AC-----T
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            31561 20 +     45743 TG-TA----------TGCGTA--G-----C--TA----C---------TA----AC-----T
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        32469 18 +     34273 AA-TA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         8137 20 -    104932 TG-TA----------TGTGTA--C-----T--TA----C---------AA----TC-----T
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 I 4
s Mirza_zaza.k141_226143                                     2575 20 +      8497 TG-TA----------TATTTA--G-----T--TA----C---------TA----TT-----T
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 143812 20 +    154973 TC-CA----------TGTATA--G-----T--TA----C---------TA----TT-----T
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                158660 20 +    265003 TA-TA----------TGAGTA--A-----T--TG----A---------TC----TT-----T
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 2056 20 -      4346 CC-CC----------CATATA--G-----T--TA----C---------CA----TT-----T
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  141758 20 -    168139 TG-TA----------TGTGTA--C-----T--CA----C---------TA----TC-----T
i Mungos_mungo.MunMun_flattened_line_8729               C 0 I 4
s Murina_feae.MurFea_scaffold_2254                          16556 20 -    100666 TG-TA----------TGAGTA--G-----T--TA----C---------TA----TT-----T
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70763088 11 +  92629107 TG-AG----------TATG-AC-A--------------------------------------
i Mus_caroli.LT608236.1                                 C 0 I 3
s Mus_musculus.chr16                                     75486145 11 +  98207768 tg-gg----------tATG-AC-A--------------------------------------
i Mus_musculus.chr16                                    C 0 I 3
s Mus_pahari.LT608305.1                                  67552306 11 +  89017189 TG-GG----------TATG-AC-A--------------------------------------
i Mus_pahari.LT608305.1                                 C 0 I 3
s Mus_spretus.CM004110.1                                 74327321 11 +  97876770 ta-gg----------tATG-AC-A--------------------------------------
i Mus_spretus.CM004110.1                                C 0 I 3
s Muscardinus_avellanarius.MusAve_scaffold_9643              8174 20 +     98495 AA-TG----------TGT-TAG-T-----C--AA----C---------TA----TT-----T
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4420999 20 -  28371801 tg-ta----------tgtgta--t-----t--ta----t---------ga----TC-----T
i Mustela_putorius.JH417978.1                           C 0 I 4
s Myocastor_coypus.MyoCoy_scaffold_3653                     87124  5 -    117718 -C-TA----------TG---------------------------------------------
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               964883 20 +   8389877 TG-TA----------TGAGTA--G-----T--TA----C---------TA----TT-----t
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5016558 20 +   6462685 tg-ta----------tgagta--g-----t--ta----c---------ta----tt-----t
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3462469 20 -   3747815 tg-tA----------TGAGTA--G-----T--TA----C---------TA----TT-----t
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         7658 20 +     66751 TG-TA----------TGAGTA--G-----T--TA----C---------TA----TT-----T
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             2527 21 -      8794 ----A----------TTTGTA--T-----T--TA----C---------TATCAGTT-----T
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        I 4 C 0
s Nannospalax_galili.KL201303.1                            107531 20 +    362372 TA-TA----------TGTGCA--A-----T--TG----T---------TA----TT-----T
i Nannospalax_galili.KL201303.1                         C 0 I 1
s Nasalis_larvatus.k141_153429                               4851 18 +     48152 AA-TA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4481736 20 -  14209539 tg-ta----------tgtgta--c-----t--ta----c---------aa----tc-----t
i Neomonachus_schauinslandi.NINY01007774.1              C 0 I 4
s Neophocaena_asiaeorientalis.KZ688543.1                  3948421 20 -   4490290 tc-cA----------TGTATA--G-----t--ta----c---------ta----tt-----t
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  46777 20 +     94413 TG-CA----------TGAGTA--G-----T--TA----G---------TA----TT-----T
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1223136                          10631 27 -     11253 AA-TA----------TGT----AG-----T--TA----CCTGTTTGACTA----TT-----T
i Nomascus_annamensis.k141_1223136                      C 0 C 0
s Nomascus_concolor.k141_468488                              1274 27 -      1482 AA-TA----------TGT----AG-----T--TA----CCTGTTTGACTA----TT-----T
i Nomascus_concolor.k141_468488                         C 0 C 0
s Nomascus_gabriellae.k141_906566                            1263 27 -      2544 AA-TA----------TGT----AG-----T--TA----CCTGTTTGACTA----TT-----T
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             21737 27 -  18771707 AA-TA----------TGT----AG-----T--TA----CCTGTTTGACTA----TT-----T
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_844529                                  1011 27 +      2124 AA-TA----------TGT----AG-----T--TA----CCTGTTTGACTA----TT-----T
i Nomascus_siki_a.k141_844529                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                27185 14 +   3668941 TA-AA----------AGTGTA--C-----T--TA----------------------------
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 I 6
s Nycticebus_bengalensis.LG16                            65564026 19 -  95554990 TA-TA----------TAT-TT--T-----C--TG----C---------CA----TA-----T
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                             871 19 +      6470 TA-TA----------TAT-TT--T-----C--TG----C---------CA----TA-----T
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65666395 19 +  89412551 TG-TA----------TAT-TT--T-----C--TG----C---------CA----TA-----T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4993012 20 -  23139505 tg-tA----------TGTGTA--A-----T--TG----T---------TT----CT-----T
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Odobenus_rosmarus.KB229369.1                             676394 20 -   3126709 tg-ta----------tgtgta--c-----t--ta----c---------ga----tc-----t
i Odobenus_rosmarus.KB229369.1                          C 0 I 4
s Odocoileus_virginianus.KZ101650.1                       1077179 20 +   1425656 tC-CC----------CATATA--G-----C--ta----c---------ca----tt-----t
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         34343 20 +     78940 TC-CC----------CATATA--G-----T--ta----c---------ca----tt-----t
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  121679 20 +    145789 CA-GG----------TGTG-AC-G-----C--TG----C---------TA----TT-----T
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  33622 19 +     62360 CA-GA----------TGTG-AC-A-----C--CA----C---------TA----TT------
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7222104 20 -   7562323 tc-ca----------TGTATA--G-----t--ta----c---------ta----tt-----t
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              40564 17 -     66828 ----A----------TTTGTA--A-----T--TA----C---------TG----TT-----T
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141872689 16 + 163896628 ---------------TGTGTA--A-----T--TG----C---------TA----TT-----T
i Oryctolagus_cuniculus.CM000803.1                      I 3 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      304521 14 -    505867 TA-AA----------AGTGTA--C-----T--TA----------------------------
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 I 6
s Otolemur_crassicaudatus.k141_321880                       36036 19 +     38679 TG-TA----------TAT-TT--T-----C--TG----C---------CA----TC-----T
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18005477 19 -  38779656 tg-ta----------tat-tt--t-----c--tg----C---------CA----TC-----T
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134074759 20 - 275406953 TC-CC----------CATATA--G-----T--ta----c---------ta----tt-----t
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      75973 20 +    140051 TC-CC----------CATATA--G-----T--TA----C---------TA----TT-----T
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127571500 17 - 205426864 AA--A----------TGT----AG-----T--TA----C---------TA----TT-----T
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120148653 17 - 196562556 AA--A----------TGT----AG-----T--TA----C---------TA----TT-----T
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  30973 20 +    295523 TG-TA----------TGTGTA--C-----T--TA----C---------TA----TC-----T
i Panthera_onca.PanOnc_flattened_line_1615              C 0 I 236
s Panthera_pardus.KV860323.1                              3634576 20 +  18214204 TG-TA----------TGTGTA--C-----T--TA----C---------ta----tc-----t
i Panthera_pardus.KV860323.1                            C 0 I 234
s Panthera_tigris.KE721879.1                              5024354 20 -   6340057 TG-TA----------TGTGTA--C-----T--TA----C---------ta----tc-----t
i Panthera_tigris.KE721879.1                            C 0 I 237
s Pantholops_hodgsonii.KE114631.1                         1063617 20 -   1292953 TC-CC----------CATATA--G-----T--ta----c---------ta----tt-----t
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188152598 18 - 188283584 AA-TA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            48810 18 +     76494 AA-TA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47509995 18 +  47705337 AA-TA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 63977 18 -    104429 AA-TA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  13763 18 -     29451 AA-TA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                34166 18 +     35859 AA-TA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    112537 20 -    135482 TG-TA----------TGTGTA--C-----T--TA----C---------TG----TG-----T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 I 4
s Perodicticus_ibeanus.k141_117958                           2082 19 -     23713 TG-TA----------TAT-TT--C-----C--CC----C---------CA----CA-----T
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            21380 19 -     27972 TG-TA----------TGT-TT--T-----C--CT----C---------CA----CA-----T
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      39987 20 -     45160 TA-TA----------CATGCA--A-----T--TA----C---------TA----CT-----T
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4946795 19 -   8017169 CA-GA----------TATG-AC-A-----C--CG----C---------TA----TT------
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            118723 20 -    122454 TC-CA----------TGTATA--G-----T--TA----C---------TA----TT-----T
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           1851 18 -      3310 AA-TA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       21757 18 -     82327 AA-TA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           18509 18 +     19957 AA-TA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26736518 18 +  26888534 AA-TA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            93650 20 +    112873 TG-TA----------TGAGTA--G-----T--TA----C---------TA----TT-----G
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             40499 18 -     61926 AA-TA----------TAT----AG-----T--TA----T---------TA----TT-----T
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        21928 18 +     78826 AA-TA----------TAT----AG-----T--TA----T---------TA----TT-----T
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              5879 18 -     15800 AA-TA----------TAT----AG-----T--TA----T---------TA----TT-----T
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                         9077 18 -     16101 AA-TA----------TAT----AG-----T--TA----T---------TA----TT-----T
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          2386 18 +      9673 AA-TA----------TAT----AG-----T--TA----T---------TA----TT-----T
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13471380 18 -  19735023 AA-TA----------TAT----AG-----T--TA----T---------TA----TT-----T
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           10288 18 -     31692 AA-TA----------TAT----AG-----T--TA----T---------TA----TT-----T
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           2789 20 +     21690 TC-CA----------TGTATA--G-----T--TA----C---------TA----TT-----T
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       19695 18 +     44506 AA-TA----------TAT----AG-----T--TA----T---------TA----CT-----T
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        19905 18 +     67491 AA-TA----------TAT----AG-----T--TA----T---------TA----CT-----T
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      10150 18 -     98129 AA-TA----------TAT----AG-----T--TA----T---------TA----CT-----T
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     19751 18 +    147771 AA-TA----------TAT----AG-----T--TA----T---------TA----CT-----T
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        20001 18 -     23762 AA-TA----------TAT----AG-----T--TA----T---------TA----CT-----T
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                           467 18 -     55515 AA-TA----------TAT----AG-----T--TA----T---------TA----CT-----T
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         19820 18 +    152463 AA-TA----------TAT----AG-----T--TA----T---------TA----CT-----T
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      6580 18 +      8943 AA-TA----------TAT----AG-----T--TA----T---------TA----CT-----T
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                          9540 18 +    134592 AA-TA----------TAT----AG-----T--TA----T---------TA----CT-----T
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          20130 18 -     75465 AA-TA----------TAT----AG-----T--TA----T---------TA----CT-----T
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              184046 17 -    373494 AA--A----------TGT----AG-----T--TA----C---------TA----TT-----T
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19803953 17 +  19899266 AA--A----------TGT----AG-----T--TA----C---------TA----TT-----T
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               2089 18 -     15069 AA-TA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              2223 18 +     14865 AA-TA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                73411 17 +     78963 ----G----------TGTGTA--G-----T--TA----C---------TG----TT-----T
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6845432 20 +  12164890 TG-TA----------TATTTA--G-----T--TA----C---------TA----TT-----T
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     13889 20 -     30946 TG-TA----------TATTTA--G-----T--TA----C---------TA----TT-----T
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                          572 20 +     11805 TG-TA----------TATTTA--G-----T--TA----C---------TA----TT-----T
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           39908 20 +     52369 TG-TA----------TATTTA--G-----T--TA----C---------TA----TT-----T
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         32296 20 -     44753 tg-ta----------tattta--g-----t--ta----c---------ta----tt-----t
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            14217 20 +     27322 TG-TA----------TATTTA--G-----T--TA----C---------TA----TT-----T
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       13856 20 -     53241 tg-ta----------tattta--g-----t--ta----c---------ta----tt-----t
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         36128 20 -     48185 tg-ta----------tattta--g-----t--ta----c---------ta----tt-----t
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           30180 19 +     77221 CA-GG----------TATG-AT-G-----C--TG----T---------TA----TT------
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            1327 20 -     27784 TG-TA----------TTAGTA--G-----T--TA----A---------TA----TT-----T
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        242879 20 -    344369 TG-TA----------TGTGTA--T-----T--TA----T---------GA----TC-----T
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 I 4
s Pteropus_alecto.KB031157.1                             13243448 20 -  17261082 TG-CA----------TGAGTA--G-----T--TA----C---------TA----TT-----T
i Pteropus_alecto.KB031157.1                            C 0 I 4
s Pteropus_vampyrus.KN525959.1                             601401 20 -   3946241 TG-CA----------TGAGTA--G-----T--TA----C---------TA----TT-----T
i Pteropus_vampyrus.KN525959.1                          C 0 I 4
s Puma_concolor.QAVW01000427.1                          131531170 20 - 161321710 tg-TA----------TGTGTA--C-----T--TA----C---------TA----TC-----T
i Puma_concolor.QAVW01000427.1                          C 0 I 6
s Pygathrix_cinerea.k141_374971                             26214 18 +     56732 AA-TA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6802705 18 +   6970761 AA-TA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             2098 18 +     18040 AA-TA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                13265 20 +     68503 TC-CC----------CATATA--G-----T--TA----C---------CA----TT-----T
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13912230 20 +  90463843 TG-GG----------TATG-AC-A-----C--TG----C---------TC----TT-----T
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1785068 20 +   2252614 tg-ta----------tgagta--g-----t--ta----c---------ta----tt-----t
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 I 4
s Rhinopithecus_bieti.k119_102124                           12651 18 -     14454 AA-TA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206373977 18 - 206558726 AA-TA----------TGT----AG-----T--TA----G---------TA----TT-----T
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44851625 18 -  45163003 AA-TA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                16750 20 +    109198 TG-CA----------TGAGTA--G-----T--TA----C---------TA----TT-----T
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 I 4
s Saiga_tatarica.SaiTat_scaffold_82192                       5047 20 +     12214 TC-CC----------CATATA--G-----T--TA----C---------TA----TT-----T
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15669592 18 -  43202129 AA-Ta----------tat----ag-----t--ta----t---------ta----tt-----t
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        1458 18 +     34089 AA-TA----------TAT----AG-----T--TA----T---------TA----TT-----T
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              1401 18 -     60842 AA-TA----------TAT----AG-----T--TA----T---------TA----TT-----T
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              1478 18 +     67014 AA-TA----------TAT----AG-----T--TA----T---------TA----TT-----T
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              1474 18 +     60816 AA-TA----------TAT----AG-----T--TA----T---------TA----TT-----T
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 1411 18 -     76454 AA-TA----------TAT----AG-----T--TA----T---------TA----TT-----T
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17337935 15 -  30362882 AA-TA----------TAT----AG-----T--TA----T---------TA------------
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         17535 15 -     62485 AA-TA----------TAT----AG-----T--TA----T---------TA------------
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   28821 24 -    114521 CA-TA----------TATGTA--A-----T--TATGACT---------TA----TT-----T
i Scalopus_aquaticus.ScaAqu_scaffold_9300               I 9 C 0
s Semnopithecus_entellus.k141_1527475                       24639 18 +     26421 AA-TA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       5099 18 +     20762 AA-TA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         38834 18 +     40653 AA-TA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                            9391 18 -     12194 AA-TA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     22813 18 -     27512 AA-TA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         31832 18 -     33692 AA-TA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   96410 20 -    120886 CA-GG----------AGTG-AC-A-----C--AA----C---------CA----TT-----T
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            15315 20 +    739146 TC-CA----------TGTATA--G-----T--TA----C---------TA----TT-----T
i Solenodon_paradoxus.SolPar_flattened_line_1012        I 2 C 0
s Sorex_araneus.JH798170.1                               17747699 20 -  27805282 TG-TA----------TGCATA--G-----C--TA----C---------TA----TT-----T
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2236987 20 +   2842873 TA-TA----------CATGTA--C-----C--CA----C---------TA----TT-----T
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             231859 20 -    276980 TG-TA----------TGTGTA--C-----T--TA----T---------GA----TC-----T
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 I 4
s Suricata_suricatta.SurSur_flattened_line_20339            24422 20 +     62062 TG-TA----------TGTGTA--C-----T--CA----C---------TA----TC-----T
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 I 4
s Sus_scrofa.CM000824.4                                 189269326 20 + 218635234 TG-CA----------TGGATA--G-----t--ta----t---------ta----tt-----t
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                     13898796 27 +  13920577 AA-TA----------TGT----AG-----T--TA----CCTGTTTGACTA----TT-----T
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               3271 20 -      6213 TG-TA----------TGAGTA--G-----T--TA----C---------TA----TT-----T
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               12201 21 +     45698 ----A----------TTTGTA--T-----T--TA----C---------TATCAGTT-----T
i Tamandua_tetradactyla.TamTet_scaffold_26877           I 4 C 0
s Tapirus_indicus.TapInd_scaffold_176                      804196 20 +   1148477 TG-TA----------ATGGTA--G-----T--TA----C---------TA----TT-----T
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  54856 20 +     99546 TG-TA----------ATGGTA--G-----T--TA----C---------TA----TT-----T
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               23527 20 +     42269 TA-TA----------TGTGT--AG-----T--TA----C---------TA----TC-----T
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               56843 20 +     65473 TA-TA----------TGTGT--AG-----T--TA----C---------TA----TC-----T
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194004134 18 - 194193292 AA-TA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  1084 21 +      6782 ----A----------TATGTA--T-----T--TA----G---------TATTAGTT-----T
i Tolypeutes_matacus.TolMat_scaffold_269431             I 41 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  133333 20 -    259118 TG-TG----------GGAGTA--G-----T--TA----A---------TA----TT-----C
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        23209 18 +     38948 AA-TA----------TGT----AG-----T--TA----C---------CA----TT-----T
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   16936 18 -     32910 AA-TA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       22834 18 +     24652 AA-TA----------TGT----AG-----T--TA----C---------CA----TT-----T
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      1712 18 -      3559 AA-TA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           39658 18 -     54611 AA-TA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       15657 18 +     17312 AA-TA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    23020 18 -     25040 AA-TA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          1686 18 +      3528 AA-TA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  48048 18 +     51589 AA-TA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       11224 18 +     14732 AA-TA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       1701 18 -     28054 AA-TA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44656496 18 -  44834318 AA-TA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        1506 18 +      3372 AA-TA----------TGT----AG-----T--TA----C---------TA----TT-----T
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   2676 20 +     90398 TT-CC----------CATAGA--A-----T--TA----T---------CA----TT-----T
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16078785 17 +  31416278 ----A----------TGTGCA--G-----T--TA----C---------TG----TT-----T
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2788630 20 -   3938065 ta-tA----------CGCCTT--G-----C--TA----C---------TA----CT-----T
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    1167 20 +     13056 TA-TA----------TGGCTT--G-----C--TA----C---------TA----CT-----T
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69310823 20 -  96451834 tc-cA----------TGTATA--G-----t--ta----c---------ta----tt-----t
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 24010 34 -     25548 TA-TATATACATATATATATA--A-----T--TGTGACT---------TA----TT-----T
i Uropsilus_gracilis.UroGra_scaffold_4143_0             I 9 C 0
s Ursus_maritimus.KK498671.1                              6511437 20 +  28682327 tg-ta----------tgtgta--c-----t--tA----C---------TA----TC-----T
i Ursus_maritimus.KK498671.1                            C 0 I 4
s Varecia_rubra.k141_432109                                  2272 20 -     20643 TG-TA----------TATTTA--C-----T--TA----C---------TA----TT-----T
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             21816 20 -     33872 TG-TA----------TATTTA--C-----T--TA----C---------TA----TT-----T
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1522136 20 -   2331223 TC-GA----------AGTATA--G-----C--TA----C---------TA----TT-----T
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                134591 14 -    281493 TA-AA----------AGTATA--C-----T--TA----------------------------
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 I 6
s Xerus_inauris.XerIna_scaffold_7898                       124090 20 -    134049 TA-TA----------CATGTA--G-----T--TA----C---------TA----TT-----T
i Xerus_inauris.XerIna_scaffold_7898                    C 0 I 1
s Zalophus_californianus.ZalCal_flattened_line_4097        211119 20 -    227762 TG-TA----------TGTGTA--C-----T--TA----C---------AA----TC-----T
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 I 4
s Zapus_hudsonius.ZapHud_scaffold_64392                     12319 20 -     20485 AA-TA----------TGTGCA--A-----T--TA----C---------TA----TT-----T
i Zapus_hudsonius.ZapHud_scaffold_64392                 I 2 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           4325 20 -      8775 TC-CA----------TGTATA--G-----T--TA----C---------AA----TT-----T
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16291  1 -    119109 I
e Octodon_degus.JH651621.1                                3678743 1836 +  10294119 I
e Heterocephalus_glaber.JH602058.1                        2548028 229 +  31725842 I
e Fukomys_damarensis.KN123630.1                          13889876  0 -  19261668 C
e Dolichotis_patagonum.DolPat_scaffold_14102                33375  0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             56104 16 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                14631 16 +     26546 I
e Cavia_tschudii.CavTsc_scaffold_488                       173989  0 +    436027 C
e Cavia_porcellus.DS562889.1                             15795798  0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15783848 16 -  24422027 I

a score=0.000000
s hg38.chr4_GL000008v2_random                                8774  6 +    209709 GT-----TTGG
s Acomys_cahirinus.AcoCah_scaffold_1625                    109130  6 -    189883 TT-----ATAT
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10654187  2 +  23371972 ---------GC
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 4 C 0
s Ailurus_fulgens.LNAC01000003.1                          7090919  2 -  16596857 ---------GC
i Ailurus_fulgens.LNAC01000003.1                        I 4 C 0
s Allactaga_bullata.AllBul_scaffold_70162                    9667  3 -     22067 TC-----T---
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_3103707                  59788  6 +     61638 GT-----TTTG
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        51596  6 +     53391 GT-----TTTG
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         2320  6 +     72529 GT-----TTTG
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          1896  6 +      3797 GT-----TTTG
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             7074  6 -     18050 GT-----TTGC
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  8185  6 -     11521 GT-----TTGC
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              7751  6 -     21359 GT-----TTGC
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1856473                                6128  6 +      7227 GT-----TTGC
i Alouatta_juara.k141_1856473                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          7042  6 -     10438 GT-----TTGC
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            3697  6 +      7047 GT-----TTGC
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             6984  6 +     10410 GT-----TTGC
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                             787  6 -      4927 GT-----TTGC
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             3715  6 +      6429 GT-----TTGC
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3517608  2 +   4113121 ---------gc
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      387801  2 -    631301 ---------GT
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            28241  2 +     33004 ---------GC
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 59439  1 +     78111 ----------C
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            2366  1 +     22701 ----------C
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5746324  1 +   9889416 ----------c
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             2908  1 -    104377 ----------C
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               2917  1 +     23246 ----------C
i Aotus_vociferans.k141_718647                          I 10 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                      966  2 +      5067 GT---------
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      14905  6 +     17483 AT-----TTGT
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 5943  2 -     29036 ---------AT
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 I 247
s Ateles_geoffroyi_b.tarseq_2582                             9536175  6 +  39197703 GT-----CTGT
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             57459  6 +     85812 GT-----CTGT
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 8458  6 +     89302 GT-----CTGT
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             12968  6 -     58268 GT-----CTGT
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             60954  6 +    119057 GT-----CTGT
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               2905  6 -     25888 GT-----CTGT
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 3665  6 -     16375 AT-----TTGT
i Avahi_laniger.k141_2840928                            C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26377561  2 +  51448160 ---------gt
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        2792  2 -     13118 ---------gt
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   40710  2 -     72089 ---------GC
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6556852  2 +   6870073 ---------gc
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138137087  2 - 161108492 ---------gc
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     569464  2 -    998990 ---------gc
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136292820  2 - 158972876 ---------gc
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1228440  2 -   1914593 ---------gc
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               110804  6 -    171031 GT-----TTGC
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                  9830  6 +    125063 GT-----TTGC
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                11878  6 -    216513 GT-----TTGC
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        4418  6 -    134917 GT-----TTGC
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3217077  2 -   8989139 ---------GT
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           394781  2 -  15254737 ---------GT
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2970515  2 +   6889770 ---------GT
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11515566  2 +  39901454 ---------AC
i CanFam4.chr31                                         I 6 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   10583  2 +     87036 ---------AC
i Canis_lupus_VD.CanFam_VD_scaffold_16982               I 6 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11262225  2 -  35597290 ---------AC
i Canis_lupus_dingo.QKWQ01001993.1                      I 6 C 0
s Canis_lupus_familiaris.chr31                           11084754  2 +  39895921 ---------AC
i Canis_lupus_familiaris.chr31                          I 6 C 0
s Canis_lupus_orion.HG994411.1                           16451788  2 -  44759192 ---------AC
i Canis_lupus_orion.HG994411.1                          I 6 C 0
s Capra_aegagrus.CM003214.1                              21322715  2 + 157394656 ---------gc
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135703942  2 - 157403528 ---------gc
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_647363                  1433 10 +      1887 -CAAAATCCCT
i Capromys_pilorides.CapPil_scaffold_647363             C 0 C 0
s Carlito_syrichta.NW_007248099.1                          306066  6 +    345090 GC-----TTGC
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               56982  2 +     67245 ---------GT
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   27472  6 +     33760 GT-----TTGT
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   156279  2 -    276539 ---------GT
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18887647  4 -  29618158 -------TTAC
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 5191  4 -     26817 -------TTAC
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                 9434  4 +     25043 -------TTAC
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         5103  6 +     21754 GC-----TTGC
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4360777  2 +   7569818 ---------GT
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623          532  2 -      9338 ---------GT
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6551584  6 +   6739814 GT-----TTTG
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      53061  6 -     54931 GT-----TTTG
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         18045  6 -     19697 GT-----TTTG
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         55576  6 -    107033 GT-----TTTG
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        2017  6 -      3853 GT-----TTTG
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          25950  6 +     30494 GT-----TTTG
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           1974  6 -      4022 GT-----TTTG
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          1867  6 -      3505 GT-----TTTG
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           20671  6 +     35983 GT-----TTTG
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11987193  6 +  12117833 GT-----TTTG
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46473946  6 +  46592721 GT-----TTTG
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      31773  6 +     33420 GT-----TTTG
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        1809  6 -      3443 GT-----TTTG
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      2800  6 -      4669 GT-----TTTG
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        2600  6 -      4411 GT-----TTTG
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         2125  6 -      4205 GT-----TTTG
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_1070855           348  2 -      1715 ---------GT
i Chaetophractus_vellerosus.ChaVel_scaffold_1070855     C 0 C 0
s Cheirogaleus_major.k141_1157592                           55970  6 -     68416 AT-----TTGT
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            5016  6 +     13308 AT-----TTGT
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             2447  6 -     18223 GT-----TTGC
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             19470  6 +     25473 GT-----TTGC
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           38509  6 +     57117 GT-----TTGC
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          43184  6 +     54541 GT-----TTGC
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chiropotes_israelita.k141_1189915                         68025  6 +    196370 GT-----TTGC
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          12206  6 +     40510 GT-----TTGC
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15135406  6 -  15256731 GT-----TTTG
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      30452  6 -     53260 GT-----TTTG
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101140901  6 + 101219884 GT-----TTTG
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                13960  2 -     21363 ---------GT
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           759266  2 +    964067 ---------gt
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_141308              6056  2 -     12508 ---------GC
i Chrysochloris_asiatica.ChrAsi_scaffold_141308         C 0 C 0
s Colobus_angolensis.KN985967.1                          10879480  6 +  10971483 GT-----TTTC
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147660638  6 + 156195979 GT-----TTTC
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            12625  6 +     23629 GT-----TTTC
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60610249  2 +  78930452 ---------GT
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         36684  2 -     40477 ---------GT
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     I 4 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 274554  6 -    399297 GT-----GTGT
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53025753  6 +  72327488 GT-----TTGT
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             17002  2 -     19186 ---------TG
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            48879  2 -     70449 ---------GC
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 4 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  205302  6 -    956709 CT-----TGGC
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 27488 10 -     67205 -TGTAATCACT
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          179157  2 -   6883506 ---------GT
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16841838  6 +  31942871 AT-----TTGC
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80034307  2 -  96802777 ---------gt
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18696295  2 -  18957592 ---------gt
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 319439  2 +    993696 ---------GT
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_170113                  697  2 +       818 ---------GT
i Diceros_bicornis.DicBicMic_scaffold_170113            C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   154699 10 +    228994 -TGTAATTACT
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3652460  6 +   4240102 AT-----GTGT
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 24014  6 +     28912 AT-----GTAT
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Echinops_telfairi.JH980316.1                           22991549  2 -  44670279 ---------GT
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                  9675  2 +     24177 ---------GT
i Eidolon_helvum.KE772537.1                             I 4 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1488966  2 +   1727528 ---------gc
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7803748  2 +  15467074 ---------tt
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        236219  6 -    369425 GT-----TTGT
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           3228  6 -      7838 GT-----TTGT
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85868640  2 +  99434291 ---------GC
i Enhydra_lutris.KZ291749.1                             I 4 C 0
s Equus_asinus.JREZ01000062.1                             5850159  2 -   7175178 ---------GT
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13348662  2 +  41866177 ---------GT
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          10152  2 +     92910 ---------GT
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11529761  2 +  16010500 ---------GA
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48767585  6 -  48907691 GT-----TTTG
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          312445  2 +    330699 ---------GT
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             58874  2 +     89355 ---------GT
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              2024  6 +     13586 AT-----TTGT
i Eulemur_albifrons.k141_715837                         I 1 C 0
s Eulemur_collaris.k141_311830                               1959  6 -      6809 AT-----TTGT
i Eulemur_collaris.k141_311830                          I 1 C 0
s Eulemur_coronatus.k141_3240342                             8432  6 +     36558 AT-----TTGT
i Eulemur_coronatus.k141_3240342                        I 1 C 0
s Eulemur_flavifrons.k141_903901                             4747  6 +     60246 AT-----GTGT
i Eulemur_flavifrons.k141_903901                        I 1 C 0
s Eulemur_fulvus.k141_653297                                 8236  6 +    109717 AT-----GTGT
i Eulemur_fulvus.k141_653297                            I 1 C 0
s Eulemur_macaco.k141_1341545                               12609  6 +     16540 AT-----GTGT
i Eulemur_macaco.k141_1341545                           I 1 C 0
s Eulemur_mongoz.k141_825972                                12886  6 +     27497 AT-----TTGT
i Eulemur_mongoz.k141_825972                            I 1 C 0
s Eulemur_rubriventer.k141_411740                           15348  6 +     26808 AT-----GTGT
i Eulemur_rubriventer.k141_411740                       I 1 C 0
s Eulemur_rufus.k141_1620292                                30076  6 +     46535 AT-----GTGT
i Eulemur_rufus.k141_1620292                            I 1 C 0
s Eulemur_sanfordi.k141_186399                              12799  6 -     29447 AT-----GTGT
i Eulemur_sanfordi.k141_186399                          I 1 C 0
s Galagoides_demidoff.k141_1769638                           7416  6 +     27357 AT-----TTGT
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               153294  6 +    324696 GT-----TTGT
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    178491  2 -    189561 ---------gc
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                            9691  6 -     18683 GT-----CTGT
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               2174  6 -     14630 GT-----TTGG
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119649273  6 - 195582420 GT-----TTGG
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   74242  6 +    118900 GT-----CTGC
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                         2594  6 +      3980 AT-----TTGT
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             25069  6 +     26611 AT-----TTGT
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             2530  6 +     56096 AT-----TTGT
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        25805  6 -     42470 at-----ttGT
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        42400  6 -     54384 at-----ttGT
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              14087  2 +     53719 ---------GC
i Helogale_parvula.HelPar_flattened_line_22962          I 4 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                24977  2 -     91191 ---------GC
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               53564  2 +     73687 ---------AT
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              144557  2 +    277961 ---------GT
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      275995  2 -    477199 ---------GT
i Hipposideros_armiger.JXIK01001085.1                   I 4 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              5153  2 -      9143 ---------GT
i Hipposideros_galeritus.HipGal_scaffold_104691         I 4 C 0
s Hoolock_leuconedys.ctg649                                    98852  6 +    115816 GT-----TTGG
i Hoolock_leuconedys.ctg649                                I 62 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 13155  2 -     67322 ---------GC
i Hyaena_hyaena.HyaHya_flattened_line_20729             I 4 C 0
s Hylobates_abbotti.k141_493872                              1989  6 +      5897 GT-----TTGG
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_282275                               1202  6 +      1846 GT-----TTGG
i Hylobates_agilis.k141_282275                          C 0 C 0
s Hylobates_klossii.k141_584463                               366  6 -      1009 GT-----TTGG
i Hylobates_klossii.k141_584463                         C 0 I 19
s Hylobates_pileatus_b.ContigUN                                 14621535  6 -  25970782 GT-----TTGG
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1133650                            1424  6 -      2775 GT-----TTGG
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             30027  6 -     60944 GT-----TTGG
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     3199  6 +     22540 GT-----TGGC
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7123087  6 +  13083262 AT-----TTGC
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_1884019                                    261  6 -      2196 at-----ttGT
i Indri_indri.k141_1884019                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               6233  2 +     17520 ---------GT
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8562353  3 +  11848649 TT-----T---
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               21064  2 +     37189 ---------AT
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          47028  6 -    147782 GT-----CTGT
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   111063  2 -    115756 ---------GT
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 I 4
s Lemur_catta.scaffold_1                                258404078  6 - 285822530 AT-----TTGT
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        20963  6 +     39228 AT-----TTGT
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            50336  6 +     63517 AT-----TTGT
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        75557  6 +    116806 AT-----TTGT
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     28601  6 -     33031 at-----ttGT
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3082859  2 -   3498232 ---------gc
i Leptonychotes_weddellii.KB714749.1                    I 4 C 0
s Lepus_americanus.LepAme_scaffold_62849                    10056  6 +     22452 TC-----TTGC
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            133409  2 +   3060487 ---------gt
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19244672  6 +  19376315 GT-----TTTG
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            7716  6 +     84689 AT-----TTGT
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3775467  6 +   6799190 AT-----TTGT
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20588324  2 -  62548349 ---------At
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11084210  2 +  39895028 ---------AC
i Lycaon_pictus.CM007556.1                              I 6 C 0
s Macaca_arctoides.k141_2201161                             16355  6 +     74745 GT-----TTTG
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12702861  6 +  12821369 GT-----TTTG
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               4957  6 +      6569 GT-----TTTG
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           43259  6 +     63263 GT-----TTTG
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_1068107                               11835  6 +     12679 GT-----TTTG
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                1408  6 +      3017 GT-----TTTG
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  43020  6 -     79256 GT-----TTTG
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196031938  6 + 196197964 GT-----TTTG
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11442044  6 +  11645122 GT-----TTTG
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   1967  6 -     46448 GT-----TTTG
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                1798  6 -      3617 GT-----TTTG
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 12130  6 -     55006 GT-----TTTG
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43837167  6 +  43892939 GT-----TTTG
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                4389  6 -      5978 GT-----TTTG
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               1972  6 -     27140 GT-----TTTG
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43433832  6 -  43563597 GT-----TTCG
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4446658  6 -   4543643 GT-----TTTG
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            143587  2 +    252755 ---------GT
i Manis_javanica.JSZB01003966.1                         I 126 C 0
s Manis_pentadactyla.KN017078.1                             33661  2 +     58827 ---------GT
i Manis_pentadactyla.KN017078.1                         I 126 C 0
s Marmota_marmota.CZRN01000005.1                         36870931  6 +  64221397 AT-----TTGC
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       61744  2 -    234502 ---------AT
i Megaderma_lyra.MegLyr_scaffold_3562                   I 4 C 0
s Mellivora_capensis.MelCap_flattened_line_1828            226134  2 -    226874 ---------GC
i Mellivora_capensis.MelCap_flattened_line_1828         I 4 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233                8671  6 +     15977 TT-----ATGT
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1043482  6 -  26018355 GT-----TTGT
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_183284                   1104  2 +      2166 ---------GT
i Mesoplodon_bidens.MesBid_scaffold_183284              C 0 C 0
s Microcebus_murinus.CM007691.1                          16507190  6 +  47401472 AT-----TTGT
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  28497  2 -     48017 ---------GT
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               20142  2 -     32043 ---------GC
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22816365  6 -  98408828 GT-----TTGT
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8206911  2 +  10048721 ---------GT
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            31581  2 +     45743 ---------GT
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        32487  6 +     34273 GT-----TTTG
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         8161  2 -    104932 ---------GC
i Mirounga_angustirostris.MirAng_flattened_line_8852    I 4 C 0
s Mirza_zaza.k141_226143                                     2595  6 +      8497 AT-----TTGT
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 143832  2 +    154973 ---------GT
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                158680  2 +    265003 ---------GT
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 2076  2 -      4346 ---------GC
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  141782  2 -    168139 ---------GC
i Mungos_mungo.MunMun_flattened_line_8729               I 4 C 0
s Murina_feae.MurFea_scaffold_2254                          16576  2 -    100666 ---------GT
i Murina_feae.MurFea_scaffold_2254                      C 0 I 4
s Mus_caroli.LT608236.1                                  70763102  6 +  92629107 GT-----TCGT
i Mus_caroli.LT608236.1                                 I 3 C 0
s Mus_musculus.chr16                                     75486159  6 +  98207768 GT-----TCGT
i Mus_musculus.chr16                                    I 3 C 0
s Mus_pahari.LT608305.1                                  67552320  6 +  89017189 GT-----TCAT
i Mus_pahari.LT608305.1                                 I 3 C 0
s Mus_spretus.CM004110.1                                 74327335  6 +  97876770 GT-----TCGT
i Mus_spretus.CM004110.1                                I 3 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              8194  6 +     98495 TT-----CTGC
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4421023  2 -  28371801 ---------GC
i Mustela_putorius.JH417978.1                           I 4 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     87129 10 -    117718 -CAAACTCCCT
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               964903  2 +   8389877 ---------gt
i Myotis_brandtii.KE161952.1                            C 0 I 4
s Myotis_davidii.KB114863.1                               5016578  2 +   6462685 ---------gt
i Myotis_davidii.KB114863.1                             C 0 I 11
s Myotis_lucifugus.GL429887.1                             3462489  2 -   3747815 ---------gt
i Myotis_lucifugus.GL429887.1                           C 0 I 4
s Myotis_myotis.MyoMyo_scaffold_6123                         7678  2 +     66751 ---------GT
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 I 4
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             2548  2 -      8794 ---------GT
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            107552  6 +    362372 CT-----TTGC
i Nannospalax_galili.KL201303.1                         I 1 I 39
s Nasalis_larvatus.k141_153429                               4869  6 +     48152 GT-----TTTC
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4481760  2 -  14209539 ---------gc
i Neomonachus_schauinslandi.NINY01007774.1              I 4 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3948441  2 -   4490290 ---------gt
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  46797  2 +     94413 ---------GT
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1223136                          10658  6 -     11253 GT-----TTGG
i Nomascus_annamensis.k141_1223136                      C 0 C 0
s Nomascus_concolor.k141_468488                              1301  6 -      1482 GT-----TTGG
i Nomascus_concolor.k141_468488                         C 0 C 0
s Nomascus_gabriellae.k141_906566                            1290  6 -      2544 GT-----TTGG
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             21764  6 -  18771707 GT-----TTGG
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_844529                                  1038  6 +      2124 GT-----TTGG
i Nomascus_siki_a.k141_844529                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                27205  2 +   3668941 ---------AC
i Nyctereutes_procyonoides.CAJHUB010000786.1            I 6 C 0
s Nycticebus_bengalensis.LG16                            65564045  6 -  95554990 AT-----TTGT
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                             890  6 +      6470 AT-----TTGT
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65666414  6 +  89412551 AT-----TTGT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4993032  6 -  23139505 GT-----TTAT
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Odobenus_rosmarus.KB229369.1                             676418  2 -   3126709 ---------gc
i Odobenus_rosmarus.KB229369.1                          I 4 C 0
s Odocoileus_virginianus.KZ101650.1                       1077199  2 +   1425656 ---------gc
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         34363  2 +     78940 ---------gc
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  121699  5 +    145789 GT-----TTG-
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  33641  3 +     62360 --------TGT
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7222124  2 -   7562323 ---------gt
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              40581  2 -     66828 ---------GT
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141872705  6 + 163896628 TC-----TTGC
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      304541  2 -    505867 ---------AC
i Otocyon_megalotis.JAEUCK010005121.1                   I 6 C 0
s Otolemur_crassicaudatus.k141_321880                       36055  6 +     38679 AT-----TTGT
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18005496  6 -  38779656 AT-----TTGT
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134074779  2 - 275406953 ---------gc
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      75993  2 +    140051 ---------GC
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127571517  6 - 205426864 GT-----TTGG
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120148670  6 - 196562556 GT-----TTGG
i Pan_troglodytes.CM009241.2                            C 0 I 16
s Panthera_onca.PanOnc_flattened_line_1615                  31229  2 +    295523 ---------GC
i Panthera_onca.PanOnc_flattened_line_1615              I 236 C 0
s Panthera_pardus.KV860323.1                              3634830  2 +  18214204 ---------gc
i Panthera_pardus.KV860323.1                            I 234 C 0
s Panthera_tigris.KE721879.1                              5024611  2 -   6340057 ---------gc
i Panthera_tigris.KE721879.1                            I 237 C 0
s Pantholops_hodgsonii.KE114631.1                         1063637  2 -   1292953 ---------gc
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188152616  6 - 188283584 GT-----TTTG
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            48828  6 +     76494 GT-----TTTG
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47510013  6 +  47705337 GT-----TTTG
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 63995  6 -    104429 GT-----TTTG
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  13781  6 -     29451 GT-----TTTG
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                34184  6 +     35859 GT-----TTTG
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    112561  2 -    135482 ---------GC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 I 4 C 0
s Perodicticus_ibeanus.k141_117958                           2101  6 -     23713 AT-----TTGT
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            21399  6 -     27972 AT-----TTGT
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      40007  6 -     45160 AT-----GTAT
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4946814  3 -   8017169 --------TGT
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            118743  2 -    122454 ---------GT
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           1869  6 -      3310 GT-----TTTC
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       21775  6 -     82327 GT-----TTTC
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           18527  6 +     19957 GT-----TTTC
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26736536  6 +  26888534 GT-----TTTC
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            93670  2 +    112873 ---------GT
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 I 4
s Pithecia_albicans.k141_991845                             40517  6 -     61926 GT-----TTGC
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        21946  6 +     78826 GT-----TTGC
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              5897  6 -     15800 GT-----TTGC
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                         9095  6 -     16101 GT-----TTGC
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          2404  6 +      9673 GT-----TTGC
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13471398  6 -  19735023 GT-----TTGC
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           10306  6 -     31692 GT-----TTGC
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           2809  2 +     21690 ---------GT
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       19713  6 +     44506 GT-----TTGC
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        19923  6 +     67491 GT-----TTGC
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      10168  6 -     98129 GT-----TTGC
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     19769  6 +    147771 GT-----TTGC
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        20019  6 -     23762 GT-----TTGC
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                           485  6 -     55515 GT-----TTGC
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         19838  6 +    152463 GT-----TTGC
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      6598  6 +      8943 GT-----TTGC
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                          9558  6 +    134592 GT-----TTGC
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          20148  6 -     75465 GT-----TTGC
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              184063  6 -    373494 GT-----TTGG
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19803970  6 +  19899266 GT-----TTGG
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               2107  6 -     15069 GT-----TTTC
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              2241  6 +     14865 GT-----TTTC
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                73428  2 +     78963 ---------AT
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6845452  6 +  12164890 AT-----TTGT
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     13909  6 -     30946 AT-----TTGT
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                          592  6 +     11805 AT-----TTGT
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           39928  6 +     52369 AT-----TTGT
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         32316  6 -     44753 at-----ttGT
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            14237  6 +     27322 AT-----TTGT
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       13876  6 -     53241 at-----ttGT
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         36148  6 -     48185 at-----ttGT
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           30199  6 +     77221 TT-----ATGT
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            1347  2 -     27784 ---------GT
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        242903  2 -    344369 ---------GC
i Pteronura_brasiliensis.PteBra_flattened_line_1343     I 4 C 0
s Pteropus_alecto.KB031157.1                             13243472  2 -  17261082 ---------GT
i Pteropus_alecto.KB031157.1                            I 4 C 0
s Pteropus_vampyrus.KN525959.1                             601425  2 -   3946241 ---------GT
i Pteropus_vampyrus.KN525959.1                          I 4 C 0
s Pygathrix_cinerea.k141_374971                             26232  6 +     56732 GT-----TTTC
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6802723  6 +   6970761 GT-----TTTC
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             2116  6 +     18040 GT-----TTTC
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                13285  2 +     68503 ---------GC
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13912250  6 +  90463843 CT-----TTGC
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1785092  2 +   2252614 ---------gt
i Rhinolophus_sinicus.LVEH01000179.1                    I 4 C 0
s Rhinopithecus_bieti.k119_102124                           12669  6 -     14454 GT-----TTTC
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206373995  6 - 206558726 GT-----TTTC
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44851643  6 -  45163003 GT-----TTTC
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                16774  2 +    109198 ---------GT
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            I 4 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       5067  2 +     12214 ---------GC
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15669610  6 -  43202129 at-----ttgc
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        1476  6 +     34089 AT-----TTGC
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              1419  6 -     60842 AT-----TTGC
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              1496  6 +     67014 AT-----TTGC
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              1492  6 +     60816 AT-----TTGC
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 1429  6 -     76454 AT-----TTGC
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17337950  4 -  30362882 -------TTAC
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         17550  4 -     62485 -------TTAC
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   28845  2 -    114521 ---------GT
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1527475                       24657  6 +     26421 GT-----TTTC
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       5117  6 +     20762 GT-----TTTC
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         38852  6 +     40653 GT-----TTTC
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                            9409  6 -     12194 GT-----TTTC
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     22831  6 -     27512 GT-----TTTC
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         31850  6 -     33692 GT-----TTTC
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   96430  6 -    120886 AT-----TTGT
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            15335  2 +    739146 ---------GT
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17747719  2 -  27805282 ---------GT
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2237007  6 +   2842873 AT-----TTGC
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             231883  2 -    276980 ---------GC
i Spilogale_gracilis.SpiGra_flattened_line_905          I 4 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            24446  2 +     62062 ---------GC
i Suricata_suricatta.SurSur_flattened_line_20339        I 4 C 0
s Sus_scrofa.CM000824.4                                 189269346  2 + 218635234 ---------gt
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                     13898823  6 +  13920577 GT-----TTGG
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               3291  2 -      6213 ---------GT
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               12222  2 +     45698 ---------GT
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      804216  2 +   1148477 ---------GT
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  54876  2 +     99546 ---------GT
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               23547  6 +     42269 GC-----TTGC
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               56863  6 +     65473 GC-----TTGC
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194004152  6 - 194193292 GT-----TTTG
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  1105  2 +      6782 ---------GT
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  133353  2 -    259118 ---------AT
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        23227  6 +     38948 GT-----TTTC
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   16954  6 -     32910 GT-----TTTC
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       22852  6 +     24652 GT-----TTTC
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      1730  6 -      3559 GT-----TTTC
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           39676  6 -     54611 GT-----TTTC
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       15675  6 +     17312 GT-----TTTC
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    23038  6 -     25040 GT-----TTTC
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          1704  6 +      3528 GT-----TTTC
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  48066  6 +     51589 GT-----TTTC
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       11242  6 +     14732 GT-----TTTC
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       1719  6 -     28054 GT-----TTTC
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44656514  6 -  44834318 GT-----TTTC
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        1524  6 +      3372 GT-----TTTC
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   2696  2 +     90398 ---------GC
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16078802  2 +  31416278 ---------AT
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69310843  2 -  96451834 ---------gt
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 24044  2 -     25548 ---------AC
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6511461  2 +  28682327 ---------GC
i Ursus_maritimus.KK498671.1                            I 4 C 0
s Tupaia_chinensis.KB320831.1                             2788650  1 -   3938065 G----------
i Tupaia_chinensis.KB320831.1                           C 0 I 1
s Tupaia_tana.TupTan_flattened_line_68454                    1187  1 +     13056 G----------
i Tupaia_tana.TupTan_flattened_line_68454               C 0 I 1
s Varecia_rubra.k141_432109                                  2292  6 -     20643 AT-----TGGT
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             21836  6 -     33872 AT-----TGGT
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1522156  2 -   2331223 ---------GT
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                134611  2 -    281493 ---------AC
i Vulpes_lagopus.VulLag_flattened_line_2045             I 6 C 0
s Xerus_inauris.XerIna_scaffold_7898                       124111  1 -    134049 ----------T
i Xerus_inauris.XerIna_scaffold_7898                    I 1 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        211143  2 -    227762 ---------GC
i Zalophus_californianus.ZalCal_flattened_line_4097     I 4 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     12339  3 -     20485 TC-----T---
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           4345  2 -      8775 ---------GT
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Puma_concolor.QAVW01000427.1                          131531190  6 - 161321710 I
e Felis_nigripes.FelNig_flattened_line_8080                 18037  6 +     52776 I
e Felis_catus_fca126.CM031420.1                         129276902  6 - 158578461 I
e Acinonyx_jubatus.LLWD01000356.1                         2030850  6 +   3721120 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16291  1 -    119109 I
e Octodon_degus.JH651621.1                                3678743 1836 +  10294119 I
e Heterocephalus_glaber.JH602058.1                        2548028 229 +  31725842 I
e Galago_senegalensis.k141_964197                           10357  0 -     43889 C
e Galago_moholi.ctg555                                     207977  0 -    847004 C
e Fukomys_damarensis.KN123630.1                          13889876  0 -  19261668 C
e Dolichotis_patagonum.DolPat_scaffold_14102                33375  0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             56104 16 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                14631 16 +     26546 I
e Chinchilla_lanigera.JH721867.1                         15958833  6 +  43084221 I
e Cavia_tschudii.CavTsc_scaffold_488                       173989  0 +    436027 C
e Cavia_porcellus.DS562889.1                             15795798  0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15783848 16 -  24422027 I

a score=0.000000
s hg38.chr4_GL000008v2_random                                8780 16 +    209709 A---------------------CTGTCATA---CTA---G--A-----A------A
s Acinonyx_jubatus.LLWD01000356.1                         2030856 17 +   3721120 a---------------------ttttttaa---ctg---g--aa----a------a
i Acinonyx_jubatus.LLWD01000356.1                       I 6 I 1
s Acomys_cahirinus.AcoCah_scaffold_1625                    109136 14 -    189883 A---------------------TTCCATTA---GTA---A--A-------------
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 I 3
s Ailuropoda_melanoleuca.LNAT01000321.1                  10654189 17 +  23371972 A---------------------ttttctaa---ctg---a--aa----a------a
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 I 2
s Ailurus_fulgens.LNAC01000003.1                          7090921 20 -  16596857 A---------------------CTTtttaa---ctggggg--aa----a------a
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                    9670  2 -     22067 -----------------------------------A---G----------------
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_3103707                  59794 15 +     61638 A---------------------CTCTCATG---CCA---G--A-----A-------
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        51602 15 +     53391 A---------------------CTCTCATA---CCA---G--A-----A-------
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         2326 16 +     72529 A---------------------CTCTCATA---CCA---G--A----AA-------
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          1902 15 +      3797 A---------------------CTCTCATA---CCA---G--A-----A-------
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             7080 17 -     18050 A---------------------CTCTCAAA---CAA---G--A-----A-----AA
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  8191 17 -     11521 A---------------------CTCTCAAA---CCA---G--A-----A-----AA
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              7757 17 -     21359 A---------------------CTCTCAAA---CAA---G--A-----A-----AA
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1856473                                6134 17 +      7227 A---------------------CTCTCAAA---CAA---G--A-----A-----AA
i Alouatta_juara.k141_1856473                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          7048 17 -     10438 A---------------------CTCTCAAA---CCA---G--A-----A-----AA
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            3703 17 +      7047 A---------------------CTCTCAAA---CCA---G--A-----A-----AA
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             6990 17 +     10410 A---------------------CTCTCAAA---CCA---G--A-----A-----AA
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                             793 17 -      4927 A---------------------CTCTCAAA---CAA---G--A-----A-----AA
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             3721 17 +      6429 A---------------------CTCTCAAA---CAA---G--A-----A-----AA
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3517610 20 +   4113121 a---------------------ttttttaa---ctg---a--aa----aaaa---a
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      387803 20 -    631301 A---------------------CCTTTAAA---CTA---G--A-TTTTT------T
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            28243 17 +     33004 A---------------------TTTTTAAA---CTG---A--A----AA------A
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 59440 14 +     78111 A---------------------CTCTCAAA---CCA---G--A-------------
i Aotus_azarae.k141_3170768                             C 0 I 2
s Aotus_griseimembra.k141_3275623                            2367 16 +     22701 A---------------------CTCTCAAA---CCA---G--A-----A------A
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5746325 14 +   9889416 a---------------------ctctcaaa---cca---g--a-------------
i Aotus_nancymaae.KZ196176.1                            C 0 I 2
s Aotus_trivirgatus.k141_1740727                             2909 17 -    104377 A---------------------CTCTCAAA---CCA---G--A----AA------A
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               2918 16 +     23246 A---------------------CTCTCAAA---CCA---G--A-----A------A
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                      968 15 +      5067 A---------------------CTCT--TC---CCA---G--A----AA------A
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      14911 17 +     17483 A---------------------TCCTTATA---CCA--CT--G-----T------A
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 6192 20 -     29036 a---------------------cctttaaa---CTA---G--A-TTTTT------A
i Artibeus_jamaicensis.ArtJam_scaffold_41619            I 247 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9536181 17 +  39197703 A---------------------CTCTTAAA---CCA---G--A-----A-----AA
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             57465 17 +     85812 A---------------------CTCTCAAA---CCA---G--A-----A-----AA
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 8464 17 +     89302 A---------------------CTCTCAAA---CCA---G--A-----A-----AA
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             12974 17 -     58268 A---------------------CTCTTAAA---CCA---G--A-----A-----AA
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             60960 17 +    119057 A---------------------CTCTCAAA---CCA---G--A-----A-----AA
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               2911 17 -     25888 A---------------------CTCTCAAA---CCA---G--A-----A-----AA
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 3671 16 -     16375 A---------------------CTCTTATA---CTA---T--T-----A------G
i Avahi_laniger.k141_2840928                            C 0 I 1
s Avahi_peyrierasi.k141_2689020                                 0  7 +      2719 ---------------------------------CTA---T--T-----A------G
i Avahi_peyrierasi.k141_2689020                         N 0 I 1
s Balaenoptera_acutorostrata.KI537095.1                  26377563 17 +  51448160 a---------------------tttttaaa---ctg---g--aa----a------a
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        2794 17 -     13118 a---------------------tttttaaa---ctg---g--aa----a------a
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   40712 17 -     72089 A---------------------TTTTTAAA---CTG---A--A----AA------A
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 I 2
s Bison_bison.KN264915.1                                  6556854  6 +   6870073 a---------------------tttct-----------------------------
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138137089  6 - 161108492 a---------------------tttct-----------------------------
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     569466  6 -    998990 a---------------------tttct-----------------------------
i Bos_mutus.JH883513.1                                  C 0 I 8
s Bos_taurus.CM000177.6                                 136292822  6 - 158972876 a---------------------tttct-----------------------------
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1228442 19 -   1914593 a---------------------tttttaaa---ctg---gaaaa----a------a
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               110810 16 -    171031 A---------------------CTCTCATA---CTA---G--A-----A------A
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                  9836 16 +    125063 A---------------------CTCTCATA---CTA---G--A-----A------A
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                11884 16 -    216513 A---------------------CTCTCATA---CTA---G--A-----A------A
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        4424 16 -    134917 A---------------------CTCTCATA---CTA---G--A-----A------A
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3217079 13 -   8989139 a---------------------cttttaaa---ttg---g----------------
i Camelus_bactrianus.KN276303.1                         C 0 I 1
s Camelus_dromedarius.KN271192.1                           394783 13 -  15254737 a---------------------cttttaaa---ttg---g----------------
i Camelus_dromedarius.KN271192.1                        C 0 I 1
s Camelus_ferus.KB016973.1                                2970517 13 +   6889770 a---------------------cttttaaa---ttg---g----------------
i Camelus_ferus.KB016973.1                              C 0 I 1
s CanFam4.chr31                                          11515568 17 +  39901454 A---------------------TTCTTTAG---CCA---G--A----AA------A
i CanFam4.chr31                                         C 0 I 1
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   10585 17 +     87036 A---------------------TTCTTTAG---CCA---G--A----AA------A
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 I 1
s Canis_lupus_dingo.QKWQ01001993.1                       11262227 17 -  35597290 A---------------------TTctttag---cca---g--aa----a------a
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 I 1
s Canis_lupus_familiaris.chr31                           11084756 17 +  39895921 A---------------------TTctttag---cca---g--aa----a------a
i Canis_lupus_familiaris.chr31                          C 0 I 1
s Canis_lupus_orion.HG994411.1                           16451790 17 -  44759192 A---------------------TTctttag---cca---g--aa----a------a
i Canis_lupus_orion.HG994411.1                          C 0 I 1
s Capra_aegagrus.CM003214.1                              21322717 22 + 157394656 a---------------------tttttaaa---ctg---a--aa----aaaaaa-a
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135703944 22 - 157403528 a---------------------tttttaaa---ctg---a--aa----aaaaaa-a
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_647363                  1443 24 +      1887 ATTCACTGGCATTCTT--A---C------A---TTA---A--G-------------
i Capromys_pilorides.CapPil_scaffold_647363             C 0 I 1
s Carlito_syrichta.NW_007248099.1                          306072 15 +    345090 A---------------------CTCAtatt---aaa---a--a-----a-------
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               56984 20 +     67245 A---------------------CCTTTAAA---CTA---G--A-TTTTT------T
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   27478 17 +     33760 A---------------------CTCTTTTA---CCA---G--A----TA------A
i Castor_canadensis.CasCan_scaffold_47037               C 0 I 1
s Catagonus_wagneri.CatWag_scaffold_1305                   156281 16 -    276539 A---------------------CTTTTTAA---CCG-AGG--G-------------
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 I 2
s Cebus_albifrons.Contig22                               18887651 16 -  29618158 A---------------------CTGTCATA---CCA---G--A-----A------A
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 5195 16 -     26817 A---------------------CTGTCATA---CCA---G--A-----A------A
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                 9438 16 +     25043 A---------------------CTGTCATA---CCA---G--A-----A------A
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         5109 15 +     21754 A---------------------CTCATATT---AAA---A--A-----A-------
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4360779 17 +   7569818 A---------------------cttttaaa---ctg---g--aa----a------a
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623          534 17 -      9338 A---------------------CTTTTAAA---CTG---G--A----AA------A
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6551590 15 +   6739814 A---------------------CTCTCATA---CCA---G--A-----A-------
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      53067 15 -     54931 A---------------------CTCTCATA---CCA---G--A-----A-------
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         18051 15 -     19697 A---------------------CTCTCATA---CCA---G--A-----A-------
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         55582 15 -    107033 A---------------------CTCTCATA---CCA---G--A-----A-------
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        2023 15 -      3853 A---------------------CTCTCATA---CCA---G--A-----A-------
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          25956 15 +     30494 A---------------------CTCTCATA---CCA---G--A-----A-------
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           1980 15 -      4022 A---------------------CTCTCATA---CCA---G--A-----A-------
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          1873 15 -      3505 A---------------------CTCTCATA---CCA---G--A-----A-------
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           20677 15 +     35983 A---------------------CTCTCATA---CCA---G--A-----A-------
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11987199 15 +  12117833 A---------------------CTCTCATA---CCA---G--A-----A-------
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46473952 15 +  46592721 A---------------------CTCTCATA---CCA---G--A-----A-------
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      31779 15 +     33420 A---------------------CTCTCATA---CCA---G--A-----A-------
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        1815 15 -      3443 A---------------------CTCTCATA---CCA---G--A-----A-------
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      2806 15 -      4669 A---------------------CTCTCATA---CCA---G--A-----A-------
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        2606 15 -      4411 A---------------------CTCTCATA---CCA---G--A-----A-------
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         2131 15 -      4205 A---------------------CTCTCATA---CCA---G--A-----A-------
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_1070855           350 14 -      1715 A---------------------TTGTTAGG---GCA---G--A-------------
i Chaetophractus_vellerosus.ChaVel_scaffold_1070855     C 0 I 1
s Cheirogaleus_major.k141_1157592                           55976 16 -     68416 A---------------------CTCTTATA---CTA---G--T-----A------G
i Cheirogaleus_major.k141_1157592                       C 0 I 1
s Cheirogaleus_medius.k141_133808                            5022 16 +     13308 A---------------------CTCTTATA---CTA---T--T-----A------G
i Cheirogaleus_medius.k141_133808                       C 0 I 1
s Cheracebus_lucifer.k141_619653                             2453 16 -     18223 A---------------------CTCTCATA---CTT---G--G-----A------A
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             19476 16 +     25473 A---------------------CTCTCATA---CTT---G--A-----A------A
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           38515 16 +     57117 A---------------------CTCTCATA---CTT---G--A-----A------A
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          43190 16 +     54541 A---------------------CTCTCATA---CTT---G--A-----A------A
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15958839  7 +  43084221 ----------------------c------a---tta---a--a-------------
i Chinchilla_lanigera.JH721867.1                        I 6 I 1
s Chiropotes_israelita.k141_1189915                         68031 16 +    196370 A---------------------CTCTCATA---CTA---G--A-----A------A
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          12212 16 +     40510 A---------------------CTCTCATA---CTA---G--A-----A------A
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15135412 16 -  15256731 A---------------------CTCTCATA---CCA---G--A----AA-------
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      30458 16 -     53260 A---------------------CTCTCATA---CCA---G--A----AA-------
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101140907 16 + 101219884 A---------------------CTCTcata---cca---g--aa----a-------
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                13962 14 -     21363 A---------------------GTTTTAGT---TAT---G--A-------------
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 I 1
s Choloepus_hoffmanni.KN194586.1                           759268 14 +    964067 a---------------------gttttagt---taa---g--a-------------
i Choloepus_hoffmanni.KN194586.1                        C 0 I 1
s Chrysochloris_asiatica.ChrAsi_scaffold_141308              6058 17 -     12508 A---------------------CTTTTTAA---CCA---G--A----AA------A
i Chrysochloris_asiatica.ChrAsi_scaffold_141308         C 0 C 0
s Colobus_angolensis.KN985967.1                          10879486 16 +  10971483 A---------------------CTCtcata---cca---g--a-----a------a
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147660644 16 + 156195979 A---------------------CTCTCATA---CCA---G--A-----A------A
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            12631 16 +     23629 A---------------------CTCTCATA---CCA---G--A-----A------A
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60610251 13 +  78930452 C---------------------CTTTAAAG---CTA---G----------------
i Condylura_cristata.JH655880.1                         C 0 I 2
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         36686 14 -     40477 T---------------------CTTTTCAA---CCA---G--A-------------
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 I 6
s Cricetomys_gambianus.CriGam_scaffold_949                 274560 14 -    399297 A---------------------CCCTATTA---GTA---A--A-------------
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 I 3
s Cricetulus_griseus.LT883672.1                          53025759 14 +  72327488 G---------------------CTCTATTA---GTA---A--A-------------
i Cricetulus_griseus.LT883672.1                         C 0 I 3
s Crocidura_indochinensis.CroInd_scaffold_38409             17004 17 -     19186 A---------------------CTTTTGAG---CTG---A--A----AA------A
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            48881 17 -     70449 A---------------------TTTTTTAA---CTG---G--A----AC------A
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 I 1
s Ctenodactylus_gundi.CteGun_scaffold_447                  205308 15 -    956709 A---------------------C--TTTAA---ACA---G--A----TT------A
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 27498 27 -     67205 ATTCACTGGCATTCTT--ACCAC------A---TTA---A--A-------------
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 I 1
s Dasypus_novemcinctus.JH568778.1                          179159 14 -   6883506 C---------------------TTTTGGGG---Gaa---c--a-------------
i Dasypus_novemcinctus.JH568778.1                       C 0 I 1
s Daubentonia_madagascariensis.ctg11                     16841844 15 +  31942871 A---------------------CTCTTATA---CCA---T--T-----A-------
i Daubentonia_madagascariensis.ctg11                    C 0 I 1
s Delphinapterus_leucas.KZ290064.1                       80034309 16 -  96802777 a---------------------tttttaaa---ctg---g--aa----a-------
i Delphinapterus_leucas.KZ290064.1                      C 0 I 1
s Desmodus_rotundus.KZ672188.1                           18696297 19 -  18957592 a---------------------cttttaaa---cta---g--a--tttt------a
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 319441 17 +    993696 A---------------------cttttaaa---ctg---g--aa----a------a
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_170113                  699 17 +       818 A---------------------CTTTTAAA---CTG---G--A----AA------A
i Diceros_bicornis.DicBicMic_scaffold_170113            C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   154709 29 +    228994 ATTCCCTGGCACTCTTTTATCAC------A---TTA---A--G-------------
i Dinomys_branickii.DinBra_scaffold_1996                C 0 I 1
s Dipodomys_ordii.KN672545.1                              3652466 17 +   4240102 G---------------------CCCTATTC---CTA---G--T----AA------A
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 24020 17 +     28912 G---------------------CCCTATTC---CCA---G--T----AA------A
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Echinops_telfairi.JH980316.1                           22991551 13 -  44670279 G---------------------CTTTTAAA---CAA---G----------------
i Echinops_telfairi.JH980316.1                          C 0 I 3
s Eidolon_helvum.KE772537.1                                  9677 20 +     24177 A---------------------CTTTTAAA---CTA---G--A-TTTCT------A
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1488968 17 +   1727528 a---------------------tttttaaa---ctg---a--aa----a------a
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7803750 12 +  15467074 c---------------------cttttaaa---aga--------------------
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        236225 14 -    369425 A---------------------CTTTATTA---ATa---a--a-------------
i Ellobius_lutescens.LOEQ01003611.1                     C 0 I 3
s Ellobius_talpinus.LOJH01090055.1                           3234 14 -      7838 A---------------------CATTATTA---GTA---A--a-------------
i Ellobius_talpinus.LOJH01090055.1                      C 0 I 3
s Enhydra_lutris.KZ291749.1                              85868642 18 +  99434291 A---------------------CTTTTTAA---CTG--GA--A----TA------A
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Equus_asinus.JREZ01000062.1                             5850161 17 -   7175178 A---------------------cttttaaa---ctg---g--aa----a------a
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13348664 17 +  41866177 A---------------------cttttaaa---ctg---g--aa----a------a
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          10154 17 +     92910 A---------------------cttttaaa---ctg---g--aa----a------a
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11529763  4 +  16010500 G---------------------CTT-------------------------------
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48767591 15 -  48907691 A---------------------CTCTCATA---CCA---G--A-----A-------
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          312447 17 +    330699 A---------------------TTTTTAAA---CTG---G--A----AA------A
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             58876 17 +     89355 A---------------------TTTTTAAA---CTG---G--A----AA------A
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 I 1
s Eulemur_albifrons.k141_715837                              2030 16 +     13586 A---------------------CGCTTATA---CTA---T--T-----A------G
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               1965 16 -      6809 A---------------------CGCTTATA---CTA---T--T-----A------G
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             8438 16 +     36558 A---------------------TGCTTATA---CTA---T--T-----A------G
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             4753 16 +     60246 A---------------------CGCTTATA---CTA---T--T-----A------G
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 8242 16 +    109717 A---------------------TGCTTATA---CTA---T--T-----A------G
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               12615 16 +     16540 A---------------------CGCTTATA---CTA---T--T-----A------G
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                12892 16 +     27497 A---------------------CGCTTATA---CTA---T--T-----A------G
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           15354 16 +     26808 A---------------------CGCTTATA---CTA---T--T-----A------G
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                30082 16 +     46535 A---------------------TGCTTATA---CTA---T--T-----A------G
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              12805 16 -     29447 A---------------------TGCTTATA---CTA---T--T-----A------G
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129889834 17 - 159252932 a---------------------ttttttaa---ctg---g--aa----a------a
i Felis_catus.CM001386.2                                I 6 I 1
s Felis_catus_fca126.CM031420.1                         129276908 18 - 158578461 a---------------------ttttttaa---ctg---ga-aa----a------a
i Felis_catus_fca126.CM031420.1                         I 6 I 1
s Felis_nigripes.FelNig_flattened_line_8080                 18043 17 +     52776 A---------------------TTTTTTAA---CTG---G--A----AA------A
i Felis_nigripes.FelNig_flattened_line_8080             I 6 I 1
s Galago_moholi.ctg555                                     207977 11 -    847004 ---------------------------ATA---CCA--CT--G-----T------A
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           10357 11 -     43889 ---------------------------ATA---CCA--CT--G-----T------A
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           7422 17 +     27357 A---------------------TCCTTATA---CCA--CT--G-----T------A
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               153300 16 +    324696 A---------------------TTCTTATA---CCA---G--A-----A------A
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    178493 17 -    189561 a---------------------tttttaaa---ctg---a--aa----a------a
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                            9697 17 -     18683 A---------------------CTCTTTTA---CCA---G--A----AA------A
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               2180 14 -     14630 A---------------------CTCTCATA---TCA---G--A-------------
i Gorilla_beringei.k141_111300                          C 0 I 1
s Gorilla_gorilla.LT578340.1                            119649279 14 - 195582420 A---------------------CTctcata---tca---g--a-------------
i Gorilla_gorilla.LT578340.1                            C 0 I 1
s Graphiurus_murinus.GraMur_scaffold_4493                   74248 17 +    118900 A---------------------CTCTTTTA---CCA---G--A----AA------A
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                         2600 16 +      3980 A---------------------CTCTTATA---CTA---T--T-----A------G
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             25075 16 +     26611 A---------------------CTCTTATA---CTA---T--T-----A------G
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             2536 16 +     56096 A---------------------CTCTTATA---CTA---T--T-----A------G
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        25811 16 -     42470 A---------------------CTCTTATA---CTA---T--T-----A------G
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        42406 16 -     54384 A---------------------CTCTTATA---CTA---T--T-----A------G
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              14089 17 +     53719 A---------------------TTTTTTAA---CAG---G--A----AA------G
i Helogale_parvula.HelPar_flattened_line_22962          C 0 I 1
s Hemitragus_hylocrius.HemHyl_scaffold_16669                24979 17 -     91191 A---------------------TTTTTAAA---CTG---A--A----AA------A
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               53566 14 +     73687 A---------------------CTTTTAAA---TTC---G--A-------------
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              144559 17 +    277961 A---------------------TTTTTAAA---CTG---G--A----AA------A
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      275997 20 -    477199 A---------------------CTTTTAaa---ctg---c--a-ctttt------t
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              5155 19 -      9143 A---------------------CTTTTAAA---CTG---C--A--CTTT------T
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg649                                    98858 16 +    115816 A---------------------CTCTCATG---CCA---G--A-----A------A
i Hoolock_leuconedys.ctg649                                C 0 I 7
s Hyaena_hyaena.HyaHya_flattened_line_20729                 13157 17 -     67322 A---------------------TTTTTTAA---CTG---G--A----AA------A
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 I 1
s Hylobates_abbotti.k141_493872                              1995 16 +      5897 A---------------------CTCTCATG---CCA---G--A-----A------A
i Hylobates_abbotti.k141_493872                         C 0 I 1
s Hylobates_agilis.k141_282275                               1208 16 +      1846 A---------------------CTCTCATG---CCA---G--A-----A------A
i Hylobates_agilis.k141_282275                          C 0 C 0
s Hylobates_klossii.k141_466549                              8448 16 +     11537 A---------------------CTCTCATG---CCA---G--A-----A------A
i Hylobates_klossii.k141_466549                         I 64 C 0
s Hylobates_pileatus_b.ContigUN                                 14621541 16 -  25970782 A---------------------CTCTCATG---CCA---G--A-----A------A
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1133650                            1430 16 -      2775 A---------------------CTCTCATG---CCA---G--A-----A------A
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             30033 16 -     60944 A---------------------CTCTCATG---CCA---G--A-----A------A
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     3205 14 +     22540 A---------------------CCCTTTTA---TTA---G--A-------------
i Hystrix_cristata.HysCri_scaffold_50788                C 0 I 1
s Ictidomys_tridecemlineatus.JH393315.1                   7123093 15 +  13083262 A---------------------CTCT--TA---CCA---T--A----TA------A
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_1884019                                    267 16 -      2196 A---------------------CTCTTATA---CTA---T--T-----A------G
i Indri_indri.k141_1884019                              C 0 I 1
s Inia_geoffrensis.IniGeo_flattened_line_66725               6235 17 +     17520 A---------------------TTTTTAAA---CTG---G--A----AA------A
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8562356  2 +  11848649 -----------------------------------A---G----------------
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               21066 17 +     37189 A---------------------TTTTTAAA---CTG---G--A----AA------A
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          47034 16 -    147782 A---------------------CTCTCAAA---CCA---G--A-----A------A
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   111069  7 -    115756 ------------------------------------------A-CTTTT------A
i Lasiurus_borealis.LasBor_scaffold_5102                I 4 C 0
s Lemur_catta.scaffold_1                                258404084 16 - 285822530 A---------------------CTCTTATA---CTA---T--T-----A------G
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        20969 16 +     39228 A---------------------CTCTTATA---CTA---T--T-----A------G
i Lepilemur_ankaranensis.k141_884009                    C 0 I 2
s Lepilemur_dorsalis.k141_134267                            50342 16 +     63517 A---------------------CTCTTATA---CTA---T--T-----A------G
i Lepilemur_dorsalis.k141_134267                        C 0 I 2
s Lepilemur_ruficaudatus.k141_617879                        75563 16 +    116806 A---------------------CTCTTATA---CTA---T--T-----A------G
i Lepilemur_ruficaudatus.k141_617879                    C 0 I 2
s Lepilemur_septentrionalis.k141_578524                     28607 16 -     33031 A---------------------CTCTTATA---CTA---T--T-----A------G
i Lepilemur_septentrionalis.k141_578524                 C 0 I 2
s Leptonychotes_weddellii.KB714749.1                      3082861 12 -   3498232 a---------------------ttttttaa---cta--------------------
i Leptonychotes_weddellii.KB714749.1                    C 0 I 3
s Lepus_americanus.LepAme_scaffold_62849                    10062 16 +     22452 A---------------------CAC-TATA---CCA---G--C----AA------A
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            133411 17 +   3060487 a---------------------tttttaaa---ctg---g--aa----a------a
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19244678 15 +  19376315 A---------------------CTCTCATA---CCA---G--A-----A-------
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            7722 17 +     84689 A---------------------TTCTTATA---CCA--CT--G-----T------A
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3775473 17 +   6799190 A---------------------TTCTTATA---CCA--CT--G-----T------A
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20588326 23 -  62548349 a---------------------attttata---cca---a--aa----aaaaaaaa
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11084212 17 +  39895028 A---------------------TTctttag---cca---g--aa----a------a
i Lycaon_pictus.CM007556.1                              C 0 I 1
s Macaca_arctoides.k141_2201161                             16361 15 +     74745 A---------------------CTCTCATA---CCA---G--A-----A-------
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12702867 15 +  12821369 A---------------------CTCTCATA---CCA---G--A-----A-------
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               4963 15 +      6569 A---------------------CTCTCATA---CCA---G--A-----A-------
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           43265 15 +     63263 A---------------------CTCTCATA---CCA---G--A-----A-------
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_1068107                               11841 15 +     12679 A---------------------CTCTCATA---CCA---G--A-----A-------
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                1414 15 +      3017 A---------------------CTCTCATA---CCA---G--A-----A-------
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  43026 15 -     79256 A---------------------CTCTCATA---CCA---G--A-----A-------
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196031944 15 + 196197964 A---------------------CTCTCATA---CCA---G--A-----A-------
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11442050 15 +  11645122 A---------------------CTCTCATA---CCA---G--A-----A-------
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   1973 15 -     46448 A---------------------CTCTCATA---CCA---G--A-----A-------
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                1804 15 -      3617 A---------------------CTCTCATA---CCA---G--A-----A-------
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 12136 15 -     55006 A---------------------CTCTCATA---CCA---G--A-----A-------
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43837173 15 +  43892939 A---------------------CTCTCATA---CCA---G--A-----A-------
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                4395 15 -      5978 A---------------------CTCTCATA---CCA---G--A-----A-------
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               1978 15 -     27140 A---------------------CTCTCATA---CCA---G--A-----A-------
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43433838 15 -  43563597 A---------------------CTCTCATA---CCA---G--A-----A-------
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4446664 15 -   4543643 A---------------------CTCTCATA---CCA---G--A-----A-------
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            143589 21 +    252755 a---------------------ctttgaaa---ctg---g--aaaaaga------a
i Manis_javanica.JSZB01003966.1                         C 0 I 1
s Manis_pentadactyla.KN017078.1                             33663 21 +     58827 G---------------------cttttaaa---ctg---g--aaaaaga------a
i Manis_pentadactyla.KN017078.1                         C 0 I 1
s Marmota_marmota.CZRN01000005.1                         36870937 15 +  64221397 A---------------------CTCT--TA---CCA---G--A----TA------A
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       61746 20 -    234502 A---------------------CTTTTAAA---CTG---G--A-TTTTT------A
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_1828            226136 17 -    226874 A---------------------CTTTTTAA---CTG--GA--A----AA-------
i Mellivora_capensis.MelCap_flattened_line_1828         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233                8677 14 +     15977 A---------------------CTTTATTA---ATA---A--A-------------
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 I 3
s Mesocricetus_auratus.KB708139.1                         1043488 14 -  26018355 G---------------------CTCATGTA---GTA---A--A-------------
i Mesocricetus_auratus.KB708139.1                       C 0 I 1
s Mesoplodon_bidens.MesBid_scaffold_183284                   1106 17 +      2166 A---------------------TTTTTAAA---CTG---G--A----AA------A
i Mesoplodon_bidens.MesBid_scaffold_183284              C 0 C 0
s Microcebus_murinus.CM007691.1                          16507196 16 +  47401472 A---------------------ATCTTATA---CTA---T--T-----A------G
i Microcebus_murinus.CM007691.1                         C 0 I 1
s Microgale_talazaci.MicTal_scaffold_34660                  28499 13 -     48017 A---------------------CTTTTAAA---CAT---G----------------
i Microgale_talazaci.MicTal_scaffold_34660              C 0 I 3
s Micronycteris_hirsuta.MicHir_scaffold_37978               20144 14 -     32043 A---------------------CTTTTAAA---CTA---G--A-------------
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 I 6
s Microtus_ochrogaster.CM001673.1                        22816371 14 -  98408828 A---------------------CTTTATTA---GTA---a--a-------------
i Microtus_ochrogaster.CM001673.1                       C 0 I 3
s Miniopterus_natalensis.LDJU01000022.1                   8206913 20 +  10048721 A---------------------CTtttaaa---ctg---g--a-tttta------a
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            31583 21 +     45743 A---------------------CTTTTAAA---CTG---G--ATTTTTA------A
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        32493 15 +     34273 A---------------------CTCTCATA---CCA---G--A-----A-------
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         8163 17 -    104932 A---------------------TTTTTTAA---CTG---A--A----AA------A
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     2601 16 +      8497 A---------------------CTCTTATA---CTA---T--T-----A------G
i Mirza_zaza.k141_226143                                C 0 I 1
s Monodon_monoceros.MonMon_M_scaffold_5598                 143834 16 +    154973 A---------------------TTTTTAAA---CTG---G--A----AA-------
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 I 1
s Mormoops_blainvillei.MorMeg_scaffold_2952                158682 20 +    265003 A---------------------TTTTTAAA---CTG---G--A-TTTCT------A
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 2078 17 -      4346 A---------------------TTTTTAAA---CTG---A--A----AA------A
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  141784 17 -    168139 A---------------------TTTTTTAA---CGG---A--A----AA------G
i Mungos_mungo.MunMun_flattened_line_8729               C 0 I 1
s Murina_feae.MurFea_scaffold_2254                          16582  7 -    100666 ------------------------------------------A-CTTTT------A
i Murina_feae.MurFea_scaffold_2254                      I 4 C 0
s Mus_caroli.LT608236.1                                  70763108 14 +  92629107 G---------------------CTCTATAA---ACa---a--a-------------
i Mus_caroli.LT608236.1                                 C 0 I 3
s Mus_musculus.chr16                                     75486165 14 +  98207768 G---------------------CTCTATAA---ACA---A--A-------------
i Mus_musculus.chr16                                    C 0 I 3
s Mus_pahari.LT608305.1                                  67552326 14 +  89017189 G---------------------CTCTATAA---GCA---A--A-------------
i Mus_pahari.LT608305.1                                 C 0 I 3
s Mus_spretus.CM004110.1                                 74327341 14 +  97876770 G---------------------CTCTATAA---ACA---A--A-------------
i Mus_spretus.CM004110.1                                C 0 I 3
s Muscardinus_avellanarius.MusAve_scaffold_9643              8200 17 +     98495 A---------------------CTCTTTAA---CCA---G--A----AT------A
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4421025 18 -  28371801 A---------------------ctttttaa---ctgg--a--aa----a------a
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     87139 24 -    117718 GTTCACTAGCATTCTT--A---C------A---TTA---A--G-------------
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 I 1
s Myotis_brandtii.KE161952.1                               964909  7 +   8389877 ------------------------------------------a-ctttt------a
i Myotis_brandtii.KE161952.1                            I 4 C 0
s Myotis_davidii.KB114863.1                               5016591  7 +   6462685 ------------------------------------------a-ctttt------a
i Myotis_davidii.KB114863.1                             I 11 C 0
s Myotis_lucifugus.GL429887.1                             3462495  7 -   3747815 ------------------------------------------a-ctttt------t
i Myotis_lucifugus.GL429887.1                           I 4 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         7684  7 +     66751 ------------------------------------------A-CTTTT------A
i Myotis_myotis.MyoMyo_scaffold_6123                    I 4 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             2550 14 -      8794 A---------------------GTTTTAGT---TAA---G--A-------------
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 I 1
s Nannospalax_galili.KL204535.1                           2056926 17 +   2354432 A---------------------CTCTTTAA---TCA---G--A----AA------A
i Nannospalax_galili.KL204535.1                         I 40 C 0
s Nasalis_larvatus.k141_153429                               4875 16 +     48152 A---------------------CTCTCATG---CCA---G--A-----A------A
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4481762 17 -  14209539 a---------------------ttttttaa---ctg---a--aa----a------a
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3948443 17 -   4490290 a---------------------tttttaaa---ctg---g--a----ga------a
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 I 1
s Noctilio_leporinus.NocLep_scaffold_12062                  46799 23 +     94413 A---------------------CTTTTAAATATTTG---A--A-TCTTT------A
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1223136                          10664 16 -     11253 A---------------------CTCTTATA---CCA---G--A-----A------A
i Nomascus_annamensis.k141_1223136                      C 0 C 0
s Nomascus_concolor.k141_468488                              1307 16 -      1482 A---------------------CTCTTATA---CCA---G--A-----A------A
i Nomascus_concolor.k141_468488                         C 0 C 0
s Nomascus_gabriellae.k141_906566                            1296 16 -      2544 A---------------------CTCTTATA---CCA---G--A-----A------A
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             21770 16 -  18771707 A---------------------CTCTTATA---CCA---G--A-----A------A
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_844529                                  1044 16 +      2124 A---------------------CTCTTATA---CCA---G--A-----A------A
i Nomascus_siki_a.k141_844529                             C 0 I 1
s Nyctereutes_procyonoides.CAJHUB010000786.1                27207 17 +   3668941 A---------------------TTctttag---cca---g--aa----a------a
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 I 1
s Nycticebus_bengalensis.LG16                            65564051 17 -  95554990 A---------------------TTCTTATA---CCA--CT--G-----T------A
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                             896 17 +      6470 A---------------------TTCTTATA---CCA--CT--G-----T------A
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65666420 17 +  89412551 A---------------------TTCTTATA---CCA--CT--G-----T------A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4993038 17 -  23139505 A---------------------CTGttata---tca---g--a----ga------a
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Odobenus_rosmarus.KB229369.1                             676420 16 -   3126709 a---------------------ttttttaa---ctg---a--aa----a-------
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1077201 17 +   1425656 a---------------------tttttaaa---ctg---a--aa----a------a
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         34365 17 +     78940 a---------------------tttttaaa---ctg---a--aa----a------a
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  121704 14 +    145789 A---------------------CTCTGTAA---GTA---A--A-------------
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 I 3
s Onychomys_torridus.OnyTor_scaffold_12578                  33644 14 +     62360 A---------------------CTCTATTA---GTA---A--T-------------
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 I 3
s Orcinus_orca.KB316965.1                                 7222126 17 -   7562323 a---------------------tttttaaa---ctg---g--aa----a------a
i Orcinus_orca.KB316965.1                               C 0 I 1
s Orycteropus_afer.OryAfe_flattened_line_13509              40583 17 -     66828 A---------------------CTTTTAAA---GCA---G--A----AT------A
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141872711 16 + 163896628 A---------------------CAC-TATA---tca---g--ca----a------a
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      304543 17 -    505867 A---------------------TTctttag---cca---g--aa----a------a
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 I 1
s Otolemur_crassicaudatus.k141_321880                       36061 17 +     38679 A---------------------TCCTTATA---CCA--CT--G-----T------A
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18005502 17 -  38779656 A---------------------TCCTTATA---CCA--CT--G-----T------A
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134074781 17 - 275406953 a---------------------tttttaaa---ctg---a--aa----a------a
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      75995 17 +    140051 A---------------------TTTTTAAA---CTG---A--A----AA------A
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127571523 16 - 205426864 A---------------------CTctcata---tca---g--a-----a------a
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.KZ622857.1                               324505 17 +    772158 A---------------------CTctcata---cca---ga-a-----a------a
i Pan_troglodytes.KZ622857.1                            I 166 I 65
s Panthera_onca.PanOnc_flattened_line_1615                  31231 18 +    295523 A---------------------TTTTTTAA---CTG---G--A----AA-----GA
i Panthera_onca.PanOnc_flattened_line_1615              C 0 I 1
s Panthera_pardus.KV860323.1                              3634832 18 +  18214204 a---------------------ttttttaa---ctg---g--aa----a-----ga
i Panthera_pardus.KV860323.1                            C 0 I 1
s Panthera_tigris.KE721879.1                              5024613 18 -   6340057 a---------------------ttttttaa---ctg---g--aa----a-----ga
i Panthera_tigris.KE721879.1                            C 0 I 1
s Pantholops_hodgsonii.KE114631.1                         1063639 17 -   1292953 a---------------------tttttaaa---ctg---a--aa----a------a
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188152622 15 - 188283584 A---------------------CTCTCATA---CCA---G--A-----A-------
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            48834 15 +     76494 A---------------------CTCTCATA---CCA---G--A-----A-------
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47510019 15 +  47705337 A---------------------CTCTCATA---CCA---G--A-----A-------
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 64001 15 -    104429 A---------------------CTCTCATA---CCA---G--A-----A-------
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  13787 15 -     29451 A---------------------CTCTCATA---CCA---G--A-----A-------
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                34190 15 +     35859 A---------------------CTCTCATA---CCA---G--A-----A-------
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    112563 14 -    135482 A---------------------TTTTTTAA---CAG---G--A-------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 I 3
s Perodicticus_ibeanus.k141_117958                           2107 17 -     23713 A---------------------TCCTTATA---CCA--CT--G-----T------T
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            21405 17 -     27972 A---------------------TCCTTATA---CCA--CT--G-----T------A
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      40013 17 -     45160 G---------------------CCCTATTC---CCA---G--T----TT------A
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4946817 14 -   8017169 A---------------------CTctatta---gta---a--t-------------
i Peromyscus_maniculatus.KI615518.1                     C 0 I 3
s Phocoena_phocoena.PhoPho_flattened_line_11948            118745 17 -    122454 A---------------------TTTTTAAA---CTG---G--A----GA------A
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 I 1
s Piliocolobus_badius.k141_1497351                           1875 16 -      3310 A---------------------CTCTCATA---CCA---G--A-----A------A
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       21781 16 -     82327 A---------------------CTCTCATA---CCA---G--A-----A------A
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           18533 16 +     19957 A---------------------CTCTCATA---CCA---G--A-----A------A
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26736542 16 +  26888534 A---------------------CTCtcata---cca---g--a-----a------a
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            93676  7 +    112873 ------------------------------------------A-GTTTT------A
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        I 4 C 0
s Pithecia_albicans.k141_991845                             40523 16 -     61926 A---------------------CTCTCATA---CTA---G--A-----A------A
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        21952 16 +     78826 A---------------------CTCTCATA---CTA---G--A-----A------A
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              5903 16 -     15800 A---------------------CTCTCATA---CTA---G--A-----A------A
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                         9101 16 -     16101 A---------------------CTCTCATA---CTA---G--A-----A------A
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          2410 16 +      9673 A---------------------CTCTCATA---CTA---G--A-----A------A
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13471404 16 -  19735023 A---------------------CTCTCATA---CTA---G--A-----A------A
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           10312 16 -     31692 A---------------------CTCTCATA---CTA---G--A-----A------A
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           2811 17 +     21690 A---------------------TTTTTAAA---CTG---G--A----AA------A
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       19719 16 +     44506 A---------------------CTCTCATA---CGT---G--A-----A------A
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        19929 16 +     67491 A---------------------CTCTCATA---CGT---G--A-----A------A
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      10174 16 -     98129 A---------------------CTCTCATA---CGT---G--A-----A------A
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     19775 16 +    147771 A---------------------CTCTCATA---CGT---G--A-----A------A
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        20025 16 -     23762 A---------------------CTCTCATA---CGT---G--A-----A------A
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                           491 16 -     55515 A---------------------CTCTCATA---CGT---G--A-----A------A
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         19844 16 +    152463 A---------------------CTCTCATA---CGT---G--A-----A------A
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      6604 16 +      8943 A---------------------CTCTCATA---CGT---G--A-----A------A
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                          9564 16 +    134592 A---------------------CTCTCATA---CGT---G--A-----A------A
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          20154 16 -     75465 A---------------------CTCTCATA---CGT---G--A-----A------A
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              184069 16 -    373494 A---------------------CTCtcata---cca---g--a-----a------a
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19803976 16 +  19899266 A---------------------CTCTCATA---CCA---G--A-----A------A
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               2113 16 -     15069 A---------------------CTCTCATA---CCA---G--A-----A------A
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              2247 16 +     14865 A---------------------CTCTCATA---CCA---G--A-----A------A
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                73430 14 +     78963 A---------------------CTTTTAAA---TTC---G--A-------------
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6845458 16 +  12164890 A---------------------CTCTTATA---Cta---t--t-----a------g
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     13915 16 -     30946 A---------------------CTCTTATA---CTA---T--T-----A------G
i Propithecus_coquerelli.NW_012147863.1                 C 0 I 1
s Propithecus_coronatus.k141_1353159                          598 16 +     11805 A---------------------CTCTTATA---CTA---T--T-----A------G
i Propithecus_coronatus.k141_1353159                    C 0 I 1
s Propithecus_diadema.k141_577245                           39934 16 +     52369 A---------------------CTCTTATA---CTA---T--T-----A------G
i Propithecus_diadema.k141_577245                       C 0 I 1
s Propithecus_edwardsi.k141_1317105                         32322 16 -     44753 A---------------------CTCTTATA---CTA---T--T-----A------G
i Propithecus_edwardsi.k141_1317105                     C 0 I 1
s Propithecus_perrieri.k141_7554                            14243 16 +     27322 A---------------------CTCTTATA---CTA---T--T-----A------G
i Propithecus_perrieri.k141_7554                        C 0 I 1
s Propithecus_tattersalli.k141_907138                       13882 16 -     53241 A---------------------CTCTTATA---CTA---T--T-----A------G
i Propithecus_tattersalli.k141_907138                   C 0 I 1
s Propithecus_verreauxi.k141_158021                         36154 16 -     48185 A---------------------CTCTTATA---CTA---T--T-----A------G
i Propithecus_verreauxi.k141_158021                     C 0 I 1
s Psammomys_obesus.NESX01026517.1                           30205 14 +     77221 A---------------------CTCTATTA---ATA---A--A-------------
i Psammomys_obesus.NESX01026517.1                       C 0 I 3
s Pteronotus_parnellii.KE867983.1                            1349 19 -     27784 A---------------------CTTCTAAa---ctg---g--g-ctttt-------
i Pteronotus_parnellii.KE867983.1                       C 0 I 1
s Pteronura_brasiliensis.PteBra_flattened_line_1343        242905 17 -    344369 A---------------------CTTTTTAA---CTG--GA--A----AA-------
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13243474 20 -  17261082 A---------------------CTTTTAAA---CTA---G--A-TTTCT------A
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             601427 20 -   3946241 A---------------------CTTTTAAA---CTA---G--A-TTTCT------A
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131531196 17 - 161321710 a---------------------ttttttaa---ctg---g--aa----a------a
i Puma_concolor.QAVW01000427.1                          I 6 I 1
s Pygathrix_cinerea.k141_374971                             26238 16 +     56732 A---------------------CTCTCATA---CCA---G--A-----A------A
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6802729 16 +   6970761 A---------------------CTCTCATA---CCA---G--A-----A------A
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             2122 16 +     18040 A---------------------CTCTCATA---CCA---G--A-----A------A
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                13287 17 +     68503 A---------------------TTTTTAAA---CTG---A--A----AA------A
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13912256 14 +  90463843 C---------------------CTCTGTGA---ATG---A--A-------------
i Rattus_norvegicus.chr11                               C 0 I 2
s Rhinolophus_sinicus.LVEH01000179.1                      1785094 20 +   2252614 A---------------------CTTTTAAA---CTG---G--A-GTTTT------T
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           12675 16 -     14454 A---------------------CTCTCATA---TCA---G--A-----A------A
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206374001 16 - 206558726 A---------------------CTCtcata---cca---g--a-----a------a
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44851649 16 -  45163003 A---------------------CTCTCATA---TCA---G--A-----A------A
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                16776 20 +    109198 A---------------------CTTTTAAA---CTA---G--A-TTTCT------A
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       5069 17 +     12214 A---------------------TTTTTAAG---CTG---A--A----AA------A
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 I 4
s Saimiri_boliviensis.NW_024100938.1                     15669616 16 -  43202129 c---------------------ctctcata---cca---g--a-----a------a
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        1482 15 +     34089 C---------------------CTCTCATA---CCA---G--A-----A-------
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              1425 13 -     60842 C---------------------CTCTCATA---CCA---G----------------
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              1502 16 +     67014 C---------------------CTCTCATA---CCA---G--A-----A------A
i Saimiri_oerstedii.k141_841116                         C 0 I 1
s Saimiri_sciureus.k141_1947592                              1498 16 +     60816 C---------------------CTCTCATA---CCA---G--A-----A------A
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 1435 16 -     76454 C---------------------CTCTCATA---CCA---G--A-----A------A
i Saimiri_ustus.k141_1282476                            C 0 I 1
s Sapajus_apella.ctg10                                   17337954 16 -  30362882 A---------------------CTGTCATA---CCA---G--A-----A------A
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         17554 16 -     62485 A---------------------CTGTCATA---CCA---G--A-----A------A
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   28847 13 -    114521 G---------------------CTTTTAAA---CTA---G----------------
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 I 2
s Semnopithecus_entellus.k141_1527475                       24663 16 +     26421 A---------------------CTCTCATA---CCA---G--A-----A------A
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       5123 16 +     20762 A---------------------CTCTCATA---CCA---G--A-----A------A
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         38858 16 +     40653 A---------------------CTCTCATA---CCA---G--A-----A------A
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                            9415 16 -     12194 A---------------------CTCTCATA---CCA---G--A-----A------A
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     22837 16 -     27512 A---------------------CTCTCATA---CCA---G--A-----A------A
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         31856 16 -     33692 A---------------------CTCTCATA---CCA---G--A-----A------A
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   96436 14 -    120886 A---------------------CTATATTA---TTA---A--A-------------
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 I 3
s Solenodon_paradoxus.SolPar_flattened_line_1012            15337 17 +    739146 C---------------------CTTTTAAA---TTG---G--G----GG------A
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17747721 12 -  27805282 T---------------------TTTATagg---ttg--------------------
i Sorex_araneus.JH798170.1                              C 0 I 1
s Spermophilus_dauricus.KZ294190.1                        2237013 15 +   2842873 A---------------------CTCT--TA---CCA---T--A----TA------A
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             231885 17 -    276980 A---------------------CGTTTTAA---CTG---A--A----AA------A
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            24448 17 +     62062 A---------------------TTTTTTAA---CAG---G--G----AA------G
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 I 1
s Sus_scrofa.CM000824.4                                 189269348 19 + 218635234 a---------------------gtttttaa---CTG-AGG--G----GG------G
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                     13898829 16 +  13920577 A---------------------CTCTCATG---CCA---G--A-----A------A
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               3293 20 -      6213 A---------------------CTTTTAAA---CTA---G--A-TTTTT------A
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               12224 14 +     45698 A---------------------GTTTTAGT---TAA---G--A-------------
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 I 1
s Tapirus_indicus.TapInd_scaffold_176                      804218 17 +   1148477 A---------------------CTTTTAAA---CTG---G--A----AA------A
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  54878 17 +     99546 A---------------------CTTTTAAA---CTG---G--A----AA------A
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               23553 15 +     42269 A---------------------TTCACATT---TAA---A--A-----A-------
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               56869 15 +     65473 A---------------------TTCACATT---TAA---A--A-----A-------
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194004158 15 - 194193292 A---------------------CTCTCATA---CCA---G--A-----A-------
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  1107 14 +      6782 A---------------------TTTTTAGA---GCA---G--A-------------
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 I 1
s Tonatia_saurophila.TonSau_scaffold_3334                  133355 20 -    259118 A---------------------CCTTTAAA---CTA---G--A-TTTCT------T
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        23233 16 +     38948 A---------------------CTCTCATA---CCA---G--A-----A------A
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   16960 16 -     32910 A---------------------CTCTCATA---CCA---G--A-----A------A
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       22858 16 +     24652 A---------------------CTCTCATA---CCA---G--A-----A------A
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      1736 16 -      3559 A---------------------CTCTCATA---CCA---G--A-----A------A
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           39682 16 -     54611 A---------------------CTCTCATA---CCA---G--A-----A------A
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       15681 16 +     17312 A---------------------CTCTCATA---CCA---G--A-----A------A
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    23044 16 -     25040 A---------------------CTCTCATA---CCA---G--A-----A------A
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          1710 16 +      3528 A---------------------CTCTCATA---CCA---G--A-----A------A
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  48072 16 +     51589 A---------------------CTCTCATA---CCA---G--A-----A------A
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       11248 16 +     14732 A---------------------CTCTCATA---CCA---G--A-----A------A
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       1725 16 -     28054 A---------------------CTCTCATA---CCA---G--A-----A------A
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44656520 16 -  44834318 A---------------------CTCTCATA---CCA---G--A-----A------A
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        1530 16 +      3372 A---------------------CTCTCATA---CCA---G--A-----A------A
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   2698 16 +     90398 A---------------------TT-TTAAA---CTG---A--A----AA------A
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16078804 14 +  31416278 A---------------------Cttttaaa---cca---g--a-------------
i Trichechus_manatus.JH594618.1                         C 0 I 2
s Tupaia_chinensis.KB320831.1                             2788652 15 -   3938065 A-----------------------ctcata---cca---g--aa----a------a
i Tupaia_chinensis.KB320831.1                           I 1 I 10
s Tupaia_tana.TupTan_flattened_line_68454                    1189 15 +     13056 A-----------------------CTCATA---CCA---G--A----AA------A
i Tupaia_tana.TupTan_flattened_line_68454               I 1 C 0
s Tursiops_truncatus.MRVK01000923.1                      69310845 17 -  96451834 a---------------------tttttaaa---ctg---g--aa----a------a
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 24046 13 -     25548 A---------------------CTTTAAAA---CTA---G----------------
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 I 3
s Ursus_maritimus.KK498671.1                              6511463 17 +  28682327 A---------------------Ttttctaa---ctg---a--aa----a------a
i Ursus_maritimus.KK498671.1                            C 0 I 1
s Varecia_rubra.k141_432109                                  2298 16 -     20643 A---------------------CTCTTATA---CTA---T--T-----A------G
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             21842 16 -     33872 A---------------------CTCTTATA---CTA---T--T-----A------G
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1522158 13 -   2331223 A---------------------CTTTTAAC---TTG---G----------------
i Vicugna_pacos.KN269600.1                              C 0 I 1
s Vulpes_lagopus.VulLag_flattened_line_2045                134613 17 -    281493 A---------------------TTCTTAAG---CCA---G--A----AA------A
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 I 1
s Xerus_inauris.XerIna_scaffold_7898                       124112 15 -    134049 A---------------------CTCT--TA---CCA---G--A----AA------A
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        211145 16 -    227762 A---------------------TTTTTTAA---CTG---A--A----AA-------
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     12342  2 -     20485 -----------------------------------A---G----------------
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           4347 17 -      8775 A---------------------TTTTTAAA---CTG---G--A----AA------A
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16291  1 -    119109 I
e Octodon_degus.JH651621.1                                3678743 1836 +  10294119 I
e Heterocephalus_glaber.JH602058.1                        2548028 229 +  31725842 I
e Fukomys_damarensis.KN123630.1                          13889876  0 -  19261668 C
e Dolichotis_patagonum.DolPat_scaffold_14102                33375  0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             56104 16 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                14631 16 +     26546 I
e Cavia_tschudii.CavTsc_scaffold_488                       173989  0 +    436027 C
e Cavia_porcellus.DS562889.1                             15795798  0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15783848 16 -  24422027 I

a score=0.000000
s hg38.chr4_GL000008v2_random                                8796 3 +    209709 A----A-A
s Acinonyx_jubatus.LLWD01000356.1                         2030874 2 +   3721120 a----a--
i Acinonyx_jubatus.LLWD01000356.1                       I 1 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    109153 5 -    189883 C-TT-C-T
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 3 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10654208 2 +  23371972 a----a--
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 2 C 0
s Ailurus_fulgens.LNAC01000003.1                          7090941 2 -  16596857 a----a--
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                    9672 2 -     22067 -----G-A
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_3103707                  59809 3 +     61638 A----A-A
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        51617 3 +     53391 A----A-A
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         2342 3 +     72529 A----A-A
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          1917 3 +      3797 A----A-A
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             7097 3 -     18050 A----A-A
i Alouatta_belzebul.k141_1818029                        C 0 I 2
s Alouatta_caraya.k141_5460                                  8208 3 -     11521 A----A-A
i Alouatta_caraya.k141_5460                             C 0 I 2
s Alouatta_discolor.k141_811576                              7774 3 -     21359 A----A-A
i Alouatta_discolor.k141_811576                         C 0 I 2
s Alouatta_juara.k141_1856473                                6151 3 +      7227 A----A-A
i Alouatta_juara.k141_1856473                           C 0 I 2
s Alouatta_macconnelli.k141_1331706                          7065 3 -     10438 A----A-A
i Alouatta_macconnelli.k141_1331706                     C 0 I 2
s Alouatta_nigerrima.k141_2718643                            3720 3 +      7047 A----A-A
i Alouatta_nigerrima.k141_2718643                       C 0 I 3
s Alouatta_palliata.k141_1316127                             7007 3 +     10410 A----A-A
i Alouatta_palliata.k141_1316127                        C 0 I 2
s Alouatta_puruensis.k141_1284840                             810 3 -      4927 A----A-A
i Alouatta_puruensis.k141_1284840                       C 0 I 2
s Alouatta_seniculus.k141_990213                             3738 3 +      6429 A----A-A
i Alouatta_seniculus.k141_990213                        C 0 I 2
s Anoura_caudifer.AnoCau_scaffold_422                      387823 1 -    631301 A-------
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            28260 2 +     33004 A----A--
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 59456 3 +     78111 A----A-A
i Aotus_azarae.k141_3170768                             I 2 I 2
s Aotus_griseimembra.k141_3275623                            2383 3 +     22701 A----A-A
i Aotus_griseimembra.k141_3275623                       C 0 I 2
s Aotus_nancymaae.KZ196176.1                              5746341 3 +   9889416 a----a-a
i Aotus_nancymaae.KZ196176.1                            I 2 I 2
s Aotus_trivirgatus.k141_1740727                             2926 3 -    104377 A----A-A
i Aotus_trivirgatus.k141_1740727                        C 0 I 2
s Aotus_vociferans.k141_718647                               2934 3 +     23246 A----A-A
i Aotus_vociferans.k141_718647                          C 0 I 2
s Aplodontia_rufa.AprRuf_scaffold_156013                      983 3 +      5067 A----A-A
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      14928 3 +     17483 A----A-A
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 6212 2 -     29036 A----A--
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9536198 3 +  39197703 A----A-A
i Ateles_geoffroyi_b.tarseq_2582                           C 0 I 2
s Ateles_belzebuth.k141_1348307                             57482 3 +     85812 A----A-A
i Ateles_belzebuth.k141_1348307                         C 0 I 2
s Ateles_chamek.k141_1072810                                 8481 3 +     89302 A----A-A
i Ateles_chamek.k141_1072810                            C 0 I 2
s Ateles_geoffroyi_a.k141_1300742                             12991 3 -     58268 A----A-A
i Ateles_geoffroyi_a.k141_1300742                         C 0 I 2
s Ateles_marginatus.k141_899112                             60977 3 +    119057 A----A-A
i Ateles_marginatus.k141_899112                         C 0 I 2
s Ateles_paniscus.k141_1631200                               2928 3 -     25888 A----A-A
i Ateles_paniscus.k141_1631200                          C 0 I 2
s Avahi_laniger.k141_2840928                                 3688 3 -     16375 A----A-A
i Avahi_laniger.k141_2840928                            I 1 C 0
s Avahi_peyrierasi.k141_2689020                                 8 3 +      2719 A----A-A
i Avahi_peyrierasi.k141_2689020                         I 1 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26377580 2 +  51448160 a----a--
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        2811 2 -     13118 a----a--
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Cacajao_ayresi.k141_724503                               110826 1 -    171031 A-------
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                  9852 1 +    125063 A-------
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                11900 1 -    216513 A-------
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        4440 1 -    134917 A-------
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3217093 2 -   8989139 a----a--
i Camelus_bactrianus.KN276303.1                         I 1 C 0
s Camelus_dromedarius.KN271192.1                           394797 2 -  15254737 a----a--
i Camelus_dromedarius.KN271192.1                        I 1 C 0
s Camelus_ferus.KB016973.1                                2970531 2 +   6889770 a----a--
i Camelus_ferus.KB016973.1                              I 1 C 0
s CanFam4.chr31                                          11515586 2 +  39901454 A----A--
i CanFam4.chr31                                         I 1 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   10603 2 +     87036 A----A--
i Canis_lupus_VD.CanFam_VD_scaffold_16982               I 1 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11262245 2 -  35597290 a----a--
i Canis_lupus_dingo.QKWQ01001993.1                      I 1 C 0
s Canis_lupus_familiaris.chr31                           11084774 2 +  39895921 a----a--
i Canis_lupus_familiaris.chr31                          I 1 C 0
s Canis_lupus_orion.HG994411.1                           16451808 2 -  44759192 a----a--
i Canis_lupus_orion.HG994411.1                          I 1 C 0
s Capromys_pilorides.CapPil_scaffold_647363                  1468 3 +      1887 T----A-A
i Capromys_pilorides.CapPil_scaffold_647363             I 1 C 0
s Castor_canadensis.CasCan_scaffold_47037                   27496 1 +     33760 -------A
i Castor_canadensis.CasCan_scaffold_47037               I 1 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               57004 2 +     67245 A----A--
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   156299 2 -    276539 A----A--
i Catagonus_wagneri.CatWag_scaffold_1305                I 2 C 0
s Cebus_albifrons.Contig22                               18887667 3 -  29618158 A----A-A
i Cebus_albifrons.Contig22                              C 0 I 2
s Cebus_olivaceus.k141_93739                                 5211 3 -     26817 A----A-A
i Cebus_olivaceus.k141_93739                            C 0 I 2
s Cebus_unicolor.k141_239009                                 9454 3 +     25043 A----A-A
i Cebus_unicolor.k141_239009                            C 0 I 2
s Ceratotherium_simum.JH767818.1                          4360796 3 +   7569818 a--a-a--
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623          551 3 -      9338 AA---A--
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6551605 3 +   6739814 A----A-A
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      53082 3 -     54931 A----A-A
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         18066 3 -     19697 A----A-A
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         55597 3 -    107033 A----A-A
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        2038 3 -      3853 A----A-A
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          25971 3 +     30494 A----A-A
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           1995 3 -      4022 A----A-A
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          1888 3 -      3505 A----A-A
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           20692 3 +     35983 A----A-A
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11987214 3 +  12117833 A----A-A
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46473967 3 +  46592721 A----A-A
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      31794 3 +     33420 A----A-A
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        1830 3 -      3443 A----A-A
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      2821 3 -      4669 A----A-A
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        2621 3 -      4411 A----A-A
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         2146 3 -      4205 A----A-A
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_1070855           365 2 -      1715 A----A--
i Chaetophractus_vellerosus.ChaVel_scaffold_1070855     I 1 I 1
s Cheirogaleus_major.k141_1157592                           55993 3 -     68416 A----C-A
i Cheirogaleus_major.k141_1157592                       I 1 C 0
s Cheirogaleus_medius.k141_133808                            5039 3 +     13308 A----C-A
i Cheirogaleus_medius.k141_133808                       I 1 C 0
s Cheracebus_lucifer.k141_619653                             2469 1 -     18223 A-------
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             19492 1 +     25473 A-------
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           38531 1 +     57117 A-------
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          43206 1 +     54541 A-------
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15958847 3 +  43084221 t----a-a
i Chinchilla_lanigera.JH721867.1                        I 1 C 0
s Chiropotes_israelita.k141_1189915                         68047 1 +    196370 A-------
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          12228 1 +     40510 A-------
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15135428 3 -  15256731 A----A-A
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      30474 3 -     53260 A----A-A
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101140923 3 + 101219884 a----a-a
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                13977 2 -     21363 A----A--
i Choloepus_didactylus.ChoDid_scaffold_36182            I 1 C 0
s Choloepus_hoffmanni.KN194586.1                           759283 2 +    964067 a----a--
i Choloepus_hoffmanni.KN194586.1                        I 1 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_141308              6075 2 -     12508 A----A--
i Chrysochloris_asiatica.ChrAsi_scaffold_141308         C 0 C 0
s Colobus_angolensis.KN985967.1                          10879502 3 +  10971483 a----a-a
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147660660 3 + 156195979 A----A-A
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            12647 3 +     23629 A----A-A
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         36706 2 -     40477 A----A--
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     I 6 I 5
s Cricetomys_gambianus.CriGam_scaffold_949                 274577 5 -    399297 C-TT-T-T
i Cricetomys_gambianus.CriGam_scaffold_949              I 3 C 0
s Cricetulus_griseus.LT883672.1                          53025776 5 +  72327488 C-TT-T-T
i Cricetulus_griseus.LT883672.1                         I 3 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             17021 2 -     19186 A----A--
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            48899 2 -     70449 A----G--
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 1 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  205323 3 -    956709 A----A-A
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 27526 3 -     67205 T----A-A
i Ctenomys_sociabilis.CteSoc_scaffold_19489             I 1 C 0
s Dasypus_novemcinctus.JH568778.1                          179174 2 -   6883506 a----a--
i Dasypus_novemcinctus.JH568778.1                       I 1 C 0
s Daubentonia_madagascariensis.ctg11                     16841860 3 +  31942871 A----A-A
i Daubentonia_madagascariensis.ctg11                    I 1 C 0
s Delphinapterus_leucas.KZ290064.1                       80034326 2 -  96802777 a----a--
i Delphinapterus_leucas.KZ290064.1                      I 1 C 0
s Desmodus_rotundus.KZ672188.1                           18696316 2 -  18957592 a----a--
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 319458 4 +    993696 a-aa-a--
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_170113                  716 3 +       818 AA---A--
i Diceros_bicornis.DicBicMic_scaffold_170113            C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   154739 3 +    228994 T----A-A
i Dinomys_branickii.DinBra_scaffold_1996                I 1 C 0
s Dipodomys_ordii.KN672545.1                              3652483 4 +   4240102 A--G-A-A
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 24037 4 +     28912 A--G-A-A
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Echinops_telfairi.JH980316.1                           22991567 2 -  44670279 A----A--
i Echinops_telfairi.JH980316.1                          I 3 C 0
s Eidolon_helvum.KE772537.1                                  9697 2 +     24177 A----A--
i Eidolon_helvum.KE772537.1                             C 0 I 1
s Elaphurus_davidianus.JRFZ01086400.1                     1488985 3 +   1727528 a--a-a--
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        236242 5 -    369425 c-tt-t-t
i Ellobius_lutescens.LOEQ01003611.1                     I 3 C 0
s Ellobius_talpinus.LOJH01090055.1                           3251 5 -      7838 c-tt-t-t
i Ellobius_talpinus.LOJH01090055.1                      I 3 C 0
s Enhydra_lutris.KZ291749.1                              85868660 2 +  99434291 A----A--
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Equus_asinus.JREZ01000062.1                             5850178 2 -   7175178 a----a--
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13348681 1 +  41866177 -----a--
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          10171 1 +     92910 -----a--
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11529767 1 +  16010500 -----A--
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48767606 3 -  48907691 A----A-A
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          312464 2 +    330699 A----A--
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             58894 2 +     89355 A----A--
i Eubalaena_japonica.EubJap_flattened_line_7756         I 1 C 0
s Eulemur_albifrons.k141_715837                              2046 3 +     13586 A----A-A
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               1981 3 -      6809 A----A-A
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             8454 3 +     36558 A----A-A
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             4769 3 +     60246 A----A-A
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 8258 3 +    109717 A----A-A
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               12631 3 +     16540 A----A-A
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                12908 3 +     27497 A----A-A
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           15370 3 +     26808 A----A-A
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                30098 3 +     46535 A----A-A
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              12821 3 -     29447 A----A-A
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129889852 2 - 159252932 a----a--
i Felis_catus.CM001386.2                                I 1 C 0
s Felis_catus_fca126.CM031420.1                         129276927 2 - 158578461 a----a--
i Felis_catus_fca126.CM031420.1                         I 1 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 18061 2 +     52776 A----A--
i Felis_nigripes.FelNig_flattened_line_8080             I 1 C 0
s Galago_moholi.ctg555                                     207988 3 -    847004 A----A-A
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           10368 3 -     43889 A----A-A
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           7439 3 +     27357 A----A-A
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               153316 3 +    324696 A----A-A
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Glis_glis.GliGli_scaffold_79770                            9714 3 -     18683 C----A-A
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               2195 3 -     14630 A----A-A
i Gorilla_beringei.k141_111300                          I 1 C 0
s Gorilla_gorilla.LT578340.1                            119649294 3 - 195582420 a----a-a
i Gorilla_gorilla.LT578340.1                            I 1 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   74265 1 +    118900 -------A
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                         2616 3 +      3980 A----A-A
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             25091 3 +     26611 A----A-A
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             2552 3 +     56096 A----A-A
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        25827 3 -     42470 A----A-A
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        42422 3 -     54384 A----A-A
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              14107 2 +     53719 G----A--
i Helogale_parvula.HelPar_flattened_line_22962          I 1 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              144576 2 +    277961 G----A--
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      276017 2 -    477199 a----a--
i Hipposideros_armiger.JXIK01001085.1                   C 0 I 4
s Hipposideros_galeritus.HipGal_scaffold_104691              5174 2 -      9143 A----A--
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 I 4
s Hoolock_leuconedys.ctg79                                        85 3 -   7690867 A----A-A
i Hoolock_leuconedys.ctg79                                 I 19 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 13175 2 -     67322 A----A--
i Hyaena_hyaena.HyaHya_flattened_line_20729             I 1 C 0
s Hylobates_abbotti.k141_493872                              2012 3 +      5897 A----A-A
i Hylobates_abbotti.k141_493872                         I 1 C 0
s Hylobates_agilis.k141_282275                               1224 3 +      1846 A----A-A
i Hylobates_agilis.k141_282275                          C 0 C 0
s Hylobates_klossii.k141_466549                              8464 3 +     11537 A----A-A
i Hylobates_klossii.k141_466549                         C 0 I 4
s Hylobates_pileatus_b.ContigUN                                 14621557 3 -  25970782 A----A-A
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1133650                            1446 3 -      2775 A----A-A
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             30049 3 -     60944 A----A-A
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     3220 3 +     22540 T----A-A
i Hystrix_cristata.HysCri_scaffold_50788                I 1 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7123108 3 +  13083262 T----A-A
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_1884019                                    284 3 -      2196 A----A-A
i Indri_indri.k141_1884019                              I 1 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               6252 2 +     17520 A----A--
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8562358 2 +  11848649 -----G-A
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               21083 1 +     37189 -----A--
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          47050 3 -    147782 A----A-A
i Lagothrix_lagothricha.k141_12968                      C 0 I 2
s Lasiurus_borealis.LasBor_scaffold_5102                   111076 2 -    115756 A----A--
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258404100 3 - 285822530 A----A-A
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        20987 3 +     39228 A----A-A
i Lepilemur_ankaranensis.k141_884009                    I 2 C 0
s Lepilemur_dorsalis.k141_134267                            50360 3 +     63517 A----A-A
i Lepilemur_dorsalis.k141_134267                        I 2 C 0
s Lepilemur_ruficaudatus.k141_617879                        75581 3 +    116806 A----A-A
i Lepilemur_ruficaudatus.k141_617879                    I 2 C 0
s Lepilemur_septentrionalis.k141_578524                     28625 3 -     33031 A----A-A
i Lepilemur_septentrionalis.k141_578524                 I 2 C 0
s Leptonychotes_weddellii.KB714749.1                      3082876 2 -   3498232 a----a--
i Leptonychotes_weddellii.KB714749.1                    I 3 C 0
s Lepus_americanus.LepAme_scaffold_62849                    10078 6 +     22452 AAAT-A-A
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            133428 2 +   3060487 a----a--
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19244693 3 +  19376315 A----A-A
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            7739 3 +     84689 A----A-A
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3775490 3 +   6799190 A----A-A
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20588349 2 -  62548349 a----a--
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11084230 2 +  39895028 a----a--
i Lycaon_pictus.CM007556.1                              I 1 C 0
s Macaca_arctoides.k141_2201161                             16376 3 +     74745 A----A-A
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12702882 3 +  12821369 A----A-A
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               4978 3 +      6569 A----A-A
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           43280 3 +     63263 A----A-A
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_1068107                               11856 3 +     12679 A----A-A
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                1429 3 +      3017 A----A-A
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  43041 3 -     79256 A----A-A
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196031959 3 + 196197964 A----A-A
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11442065 3 +  11645122 A----A-A
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   1988 3 -     46448 A----A-A
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                1819 3 -      3617 A----A-A
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 12151 3 -     55006 A----A-A
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43837188 3 +  43892939 A----A-A
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                4410 3 -      5978 A----A-A
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               1993 3 -     27140 A----A-A
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43433853 3 -  43563597 A----A-A
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4446679 3 -   4543643 A----A-A
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            143611 2 +    252755 a----a--
i Manis_javanica.JSZB01003966.1                         I 1 C 0
s Manis_pentadactyla.KN017078.1                             33685 2 +     58827 a----a--
i Manis_pentadactyla.KN017078.1                         I 1 C 0
s Marmota_marmota.CZRN01000005.1                         36870952 3 +  64221397 T----A-A
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       61766 2 -    234502 A----A--
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 I 1
s Mellivora_capensis.MelCap_flattened_line_1828            226153 2 -    226874 A----A--
i Mellivora_capensis.MelCap_flattened_line_1828         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233                8694 5 +     15977 C-TT-T-T
i Meriones_unguiculatus.MerUng_scaffold_52233           I 3 C 0
s Mesocricetus_auratus.KB708139.1                         1043503 2 -  26018355 -----t-t
i Mesocricetus_auratus.KB708139.1                       I 1 C 0
s Mesoplodon_bidens.MesBid_scaffold_183284                   1123 1 +      2166 -----A--
i Mesoplodon_bidens.MesBid_scaffold_183284              C 0 C 0
s Microcebus_murinus.CM007691.1                          16507213 3 +  47401472 A----A-A
i Microcebus_murinus.CM007691.1                         I 1 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  28515 2 -     48017 A----A--
i Microgale_talazaci.MicTal_scaffold_34660              I 3 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               20164 2 -     32043 A----A--
i Micronycteris_hirsuta.MicHir_scaffold_37978           I 6 C 0
s Microtus_ochrogaster.CM001673.1                        22816388 5 -  98408828 c-tt-t-t
i Microtus_ochrogaster.CM001673.1                       I 3 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8206933 2 +  10048721 a----a--
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            31604 2 +     45743 A----A--
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        32508 3 +     34273 A----A-A
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         8180 2 -    104932 A----A--
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     2618 3 +      8497 A----A-A
i Mirza_zaza.k141_226143                                I 1 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 143851 1 +    154973 -----A--
i Monodon_monoceros.MonMon_M_scaffold_5598              I 1 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                158702 2 +    265003 A----A--
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  141802 2 -    168139 A----A--
i Mungos_mungo.MunMun_flattened_line_8729               I 1 C 0
s Murina_feae.MurFea_scaffold_2254                          16589 2 -    100666 A----A--
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70763125 5 +  92629107 c-tt-t-t
i Mus_caroli.LT608236.1                                 I 3 C 0
s Mus_musculus.chr16                                     75486182 5 +  98207768 C-TT-T-T
i Mus_musculus.chr16                                    I 3 C 0
s Mus_pahari.LT608305.1                                  67552343 5 +  89017189 C-TT-T-C
i Mus_pahari.LT608305.1                                 I 3 C 0
s Mus_spretus.CM004110.1                                 74327358 5 +  97876770 C-TT-T-T
i Mus_spretus.CM004110.1                                I 3 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              8217 3 +     98495 A----A-A
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4421043 2 -  28371801 a----a--
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     87164 3 -    117718 T----A-C
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 1 C 0
s Myotis_brandtii.KE161952.1                               964916 2 +   8389877 a----a--
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5016598 2 +   6462685 a----a--
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3462502 2 -   3747815 a----a--
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         7691 2 +     66751 A----A--
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             2565 2 -      8794 A----A--
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        I 1 C 0
s Nasalis_larvatus.k141_153429                               4891 3 +     48152 A----A-A
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4481779 2 -  14209539 a----a--
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3948461 2 -   4490290 a----a--
i Neophocaena_asiaeorientalis.KZ688543.1                I 1 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  46822 2 +     94413 A----A--
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1223136                          10680 3 -     11253 A----A-A
i Nomascus_annamensis.k141_1223136                      C 0 C 0
s Nomascus_concolor.k141_468488                              1323 3 -      1482 A----A-A
i Nomascus_concolor.k141_468488                         C 0 C 0
s Nomascus_gabriellae.k141_906566                            1312 3 -      2544 A----A-A
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             21786 3 -  18771707 A----A-A
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_844529                                  1061 3 +      2124 A----A-A
i Nomascus_siki_a.k141_844529                             I 1 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                27225 2 +   3668941 a----a--
i Nyctereutes_procyonoides.CAJHUB010000786.1            I 1 C 0
s Nycticebus_bengalensis.LG16                            65564068 3 -  95554990 A----A-A
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                             913 3 +      6470 A----A-A
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65666437 3 +  89412551 A----A-A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4993055 6 -  23139505 aaat-a-a
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Odobenus_rosmarus.KB229369.1                             676436 2 -   3126709 a----a--
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1077218 5 +   1425656 aaaa-a--
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  121721 5 +    145789 C-TT-T-T
i Ondatra_zibethicus.OndZib_scaffold_6821               I 3 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  33661 5 +     62360 T-TT-T-T
i Onychomys_torridus.OnyTor_scaffold_12578              I 3 C 0
s Orcinus_orca.KB316965.1                                 7222144 2 -   7562323 a----a--
i Orcinus_orca.KB316965.1                               I 1 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              40600 2 -     66828 A----A--
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141872727 6 + 163896628 aaat-a-a
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      304561 2 -    505867 a----a--
i Otocyon_megalotis.JAEUCK010005121.1                   I 1 C 0
s Otolemur_crassicaudatus.k141_321880                       36078 3 +     38679 A----A-A
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18005519 3 -  38779656 A----A-A
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Pan_paniscus.CM003386.1                               127571539 3 - 205426864 a----a-a
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120148692 3 - 196562556 a----a-a
i Pan_troglodytes.CM009241.2                            I 16 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  31250 2 +    295523 A----A--
i Panthera_onca.PanOnc_flattened_line_1615              I 1 C 0
s Panthera_pardus.KV860323.1                              3634851 2 +  18214204 a----a--
i Panthera_pardus.KV860323.1                            I 1 C 0
s Panthera_tigris.KE721879.1                              5024632 2 -   6340057 a----a--
i Panthera_tigris.KE721879.1                            I 1 C 0
s Papio_anubis.CM001492.2                               188152637 3 - 188283584 A----A-A
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            48849 3 +     76494 A----A-A
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47510034 3 +  47705337 A----A-A
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 64016 3 -    104429 A----A-A
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  13802 3 -     29451 A----A-A
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                34205 3 +     35859 A----A-A
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    112580 2 -    135482 A----C--
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 I 3 C 0
s Perodicticus_ibeanus.k141_117958                           2124 3 -     23713 A----A-A
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            21422 3 -     27972 A----A-A
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      40030 3 -     45160 A----A-A
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4946834 5 -   8017169 t-tt-t-t
i Peromyscus_maniculatus.KI615518.1                     I 3 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            118763 2 -    122454 A----A--
i Phocoena_phocoena.PhoPho_flattened_line_11948         I 1 C 0
s Piliocolobus_badius.k141_1497351                           1891 3 -      3310 A----A-A
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       21797 3 -     82327 A----A-A
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           18549 3 +     19957 A----A-A
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26736558 3 +  26888534 a----a-a
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            93683 2 +    112873 A----A--
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             40539 1 -     61926 A-------
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        21968 1 +     78826 A-------
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              5919 1 -     15800 A-------
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                         9117 1 -     16101 A-------
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          2426 1 +      9673 A-------
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13471420 1 -  19735023 A-------
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           10328 1 -     31692 A-------
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           2828 2 +     21690 A----A--
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       19735 1 +     44506 A-------
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        19945 1 +     67491 A-------
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      10190 1 -     98129 A-------
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     19791 1 +    147771 A-------
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        20041 1 -     23762 A-------
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                           507 1 -     55515 A-------
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         19860 1 +    152463 A-------
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      6620 1 +      8943 A-------
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                          9580 1 +    134592 A-------
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          20170 1 -     75465 A-------
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              184085 3 -    373494 a----a-a
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19803992 3 +  19899266 A----A-A
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               2129 3 -     15069 A----A-A
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              2263 3 +     14865 A----A-G
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6845474 3 +  12164890 a----a-a
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     13932 3 -     30946 A----A-A
i Propithecus_coquerelli.NW_012147863.1                 I 1 C 0
s Propithecus_coronatus.k141_1353159                          615 3 +     11805 A----A-A
i Propithecus_coronatus.k141_1353159                    I 1 C 0
s Propithecus_diadema.k141_577245                           39951 3 +     52369 A----A-A
i Propithecus_diadema.k141_577245                       I 1 C 0
s Propithecus_edwardsi.k141_1317105                         32339 3 -     44753 A----A-A
i Propithecus_edwardsi.k141_1317105                     I 1 C 0
s Propithecus_perrieri.k141_7554                            14260 3 +     27322 A----A-A
i Propithecus_perrieri.k141_7554                        I 1 C 0
s Propithecus_tattersalli.k141_907138                       13899 3 -     53241 A----A-A
i Propithecus_tattersalli.k141_907138                   I 1 C 0
s Propithecus_verreauxi.k141_158021                         36171 3 -     48185 A----A-A
i Propithecus_verreauxi.k141_158021                     I 1 C 0
s Psammomys_obesus.NESX01026517.1                           30222 5 +     77221 A--TCT-T
i Psammomys_obesus.NESX01026517.1                       I 3 C 0
s Pteronotus_parnellii.KE867983.1                            1369 2 -     27784 a----a--
i Pteronotus_parnellii.KE867983.1                       I 1 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        242922 2 -    344369 A----A--
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13243494 2 -  17261082 A----A--
i Pteropus_alecto.KB031157.1                            C 0 I 1
s Pteropus_vampyrus.KN525959.1                             601447 2 -   3946241 A----A--
i Pteropus_vampyrus.KN525959.1                          C 0 I 1
s Puma_concolor.QAVW01000427.1                          131531214 2 - 161321710 a----a--
i Puma_concolor.QAVW01000427.1                          I 1 C 0
s Pygathrix_cinerea.k141_374971                             26254 3 +     56732 A----A-A
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6802745 3 +   6970761 A----A-A
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             2138 3 +     18040 A----A-A
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rattus_norvegicus.chr11                                13912272 1 +  90463843 -------T
i Rattus_norvegicus.chr11                               I 2 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1785114 2 +   2252614 T----T--
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 I 4
s Rhinopithecus_bieti.k119_102124                           12691 3 -     14454 A----A-A
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206374017 3 - 206558726 a----a-a
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44851665 3 -  45163003 A----A-A
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                16796 2 +    109198 A----A--
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 I 1
s Saimiri_boliviensis.NW_024100938.1                     15669632 3 -  43202129 a----a-a
i Saimiri_boliviensis.NW_024100938.1                    C 0 I 15
s Saimiri_cassiquiarensis.k141_808270                        1497 1 +     34089 -------A
i Saimiri_cassiquiarensis.k141_808270                   C 0 I 15
s Saimiri_macrodon.k141_2087127                              1438 1 -     60842 -------A
i Saimiri_macrodon.k141_2087127                         C 0 I 15
s Saimiri_oerstedii.k141_841116                              1519 1 +     67014 -------A
i Saimiri_oerstedii.k141_841116                         I 1 I 15
s Saimiri_sciureus.k141_1947592                              1514 3 +     60816 A----A-A
i Saimiri_sciureus.k141_1947592                         C 0 I 10
s Saimiri_ustus.k141_1282476                                 1452 1 -     76454 -------A
i Saimiri_ustus.k141_1282476                            I 1 I 15
s Sapajus_apella.ctg10                                   17337970 4 -  30362882 A----AAA
i Sapajus_apella.ctg10                                  C 0 I 2
s Sapajus_macrocephalus.k141_966464                         17570 3 -     62485 A----A-A
i Sapajus_macrocephalus.k141_966464                     C 0 I 2
s Semnopithecus_entellus.k141_1527475                       24679 3 +     26421 A----A-A
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       5139 3 +     20762 A----A-A
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         38874 3 +     40653 A----A-A
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                            9431 3 -     12194 A----A-A
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     22853 3 -     27512 A----A-A
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         31872 3 -     33692 A----A-A
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   96453 5 -    120886 C-TT-T-T
i Sigmodon_hispidus.SigHis_scaffold_11332               I 3 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            15354 2 +    739146 A----A--
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17747734 2 -  27805282 a----a--
i Sorex_araneus.JH798170.1                              I 1 C 0
s Spermophilus_dauricus.KZ294190.1                        2237028 3 +   2842873 T----A-A
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             231902 2 -    276980 A----A--
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            24466 2 +     62062 A----A--
i Suricata_suricatta.SurSur_flattened_line_20339        I 1 C 0
s Sus_scrofa.CM000824.4                                 189269367 2 + 218635234 G----G--
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                     13898845 3 +  13920577 A----A-A
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               3313 2 -      6213 A----A--
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               12239 2 +     45698 A----A--
i Tamandua_tetradactyla.TamTet_scaffold_26877           I 1 C 0
s Tapirus_indicus.TapInd_scaffold_176                      804235 3 +   1148477 AA---A--
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  54895 4 +     99546 AAA--A--
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194004173 3 - 194193292 A----A-A
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  1122 2 +      6782 A----A--
i Tolypeutes_matacus.TolMat_scaffold_269431             I 1 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  133375 2 -    259118 A----A--
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        23249 3 +     38948 A----A-A
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   16976 3 -     32910 A----A-A
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       22874 3 +     24652 A----A-A
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      1752 3 -      3559 A----A-A
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           39698 3 -     54611 A----A-A
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       15697 3 +     17312 A----A-A
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    23060 3 -     25040 A----A-A
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          1726 3 +      3528 A----A-A
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  48088 3 +     51589 A----A-A
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       11264 3 +     14732 A----A-A
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       1741 3 -     28054 A----A-A
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44656536 3 -  44834318 A----A-A
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        1546 3 +      3372 A----A-A
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   2714 2 +     90398 A----A--
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16078820 2 +  31416278 a----a--
i Trichechus_manatus.JH594618.1                         I 2 C 0
s Tupaia_chinensis.KB320831.1                             2788677 3 -   3938065 a----a-a
i Tupaia_chinensis.KB320831.1                           I 10 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    1204 3 +     13056 A----A-A
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69310862 2 -  96451834 a----a--
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 24062 2 -     25548 A----A--
i Uropsilus_gracilis.UroGra_scaffold_4143_0             I 3 C 0
s Ursus_maritimus.KK498671.1                              6511481 2 +  28682327 a----a--
i Ursus_maritimus.KK498671.1                            I 1 C 0
s Varecia_rubra.k141_432109                                  2314 3 -     20643 A----A-A
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             21858 3 -     33872 A----A-A
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1522172 2 -   2331223 A----A--
i Vicugna_pacos.KN269600.1                              I 1 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                134631 2 -    281493 A----A--
i Vulpes_lagopus.VulLag_flattened_line_2045             I 1 C 0
s Xerus_inauris.XerIna_scaffold_7898                       124127 3 -    134049 T----A-A
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        211161 2 -    227762 A----A--
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     12344 2 -     20485 -----A-A
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           4364 2 -      8775 A----A--
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   28860 2 -    114521 I
e Saiga_tatarica.SaiTat_scaffold_82192                       5086 4 +     12214 I
e Rangifer_tarandus.RanTarSib_scaffold_24239                13304 0 +     68503 C
e Procavia_capensis.ProCapCap_scaffold_15315                73444 0 +     78963 C
e Pantholops_hodgsonii.KE114631.1                         1063656 0 -   1292953 C
e Ovis_canadensis.OviCan_scaffold_6251                      76012 0 +    140051 C
e Ovis_aries.CM001582.2                                 134074798 0 - 275406953 C
e Okapia_johnstoni.LVCL01S0017931.1                         34382 0 +     78940 C
e Moschus_moschiferus.MosMos_scaffold_146101                 2095 0 -      4346 C
e Heterohyrax_brucei.HetBruBak_scaffold_25354               53580 0 +     73687 C
e Hemitragus_hylocrius.HemHyl_scaffold_16669                24996 0 -     91191 C
e Giraffa_tippelskirchi.LVKQ01S012154.1                    178510 0 -    189561 C
e Elephantulus_edwardii.JH947210.1                        7803762 0 +  15467074 C
e Condylura_cristata.JH655880.1                          60610264 2 +  78930452 I
e Capra_hircus.CM004562.1                               135703966 0 - 157403528 C
e Capra_aegagrus.CM003214.1                              21322739 0 + 157394656 C
e Bubalus_bubalis.KI419065.1                              1228461 0 -   1914593 C
e Bos_taurus.CM000177.6                                 136292828 0 - 158972876 C
e Bos_mutus.JH883513.1                                     569472 8 -    998990 I
e Bos_indicus.CM003021.1                                138137095 0 - 161108492 C
e Bison_bison.KN264915.1                                  6556860 0 +   6870073 C
e Beatragus_hunteri.BeaHun_scaffold_21644                   40729 2 -     72089 I
e Ammotragus_lervia.NIVO01013474.1                        3517630 0 +   4113121 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16291 1 -    119109 I
e Tarsius_wallacei.k141_48636                               56884 0 +     65473 C
e Tarsius_lariang.k141_609102                               23568 0 +     42269 C
e Octodon_degus.JH651621.1                                3678743 1836 +  10294119 I
e Nannospalax_galili.KL204535.1                           2056943 0 +   2354432 C
e Heterocephalus_glaber.JH602058.1                        2548028 229 +  31725842 I
e Fukomys_damarensis.KN123630.1                          13889876 0 -  19261668 C
e Dolichotis_patagonum.DolPat_scaffold_14102                33375 0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             56104 16 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                14631 16 +     26546 I
e Cephalopachus_bancanus.k141_702587                         5124 0 +     21754 C
e Cavia_tschudii.CavTsc_scaffold_488                       173989 0 +    436027 C
e Cavia_porcellus.DS562889.1                             15795798 0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15783848 16 -  24422027 I
e Carlito_syrichta.NW_007248099.1                          306087 0 +    345090 C

a score=0.000000
s hg38.chr4_GL000008v2_random                                8799  4 +    209709 AA--------------T--T
s Acinonyx_jubatus.LLWD01000356.1                         2030876  4 +   3721120 aa--------------g--g
i Acinonyx_jubatus.LLWD01000356.1                       C 0 I 1
s Acomys_cahirinus.AcoCah_scaffold_1625                    109158  4 -    189883 AA--------------A--G
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10654210  4 +  23371972 aa--------------g--g
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7090943  4 -  16596857 aa--------------g--g
i Ailurus_fulgens.LNAC01000003.1                        C 0 I 5
s Allactaga_bullata.AllBul_scaffold_70162                    9674  4 -     22067 AA--------------A--A
i Allactaga_bullata.AllBul_scaffold_70162               C 0 I 221
s Allenopithecus_nigroviridis.k141_3103707                  59812  4 +     61638 AT--------------T--T
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        51620  4 +     53391 AT--------------T--T
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         2345  4 +     72529 AT--------------T--T
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          1920  4 +      3797 AT--------------T--T
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             7102  4 -     18050 AC--------------A--T
i Alouatta_belzebul.k141_1818029                        I 2 C 0
s Alouatta_caraya.k141_5460                                  8213  4 -     11521 AC--------------A--T
i Alouatta_caraya.k141_5460                             I 2 C 0
s Alouatta_discolor.k141_811576                              7779  4 -     21359 AC--------------A--T
i Alouatta_discolor.k141_811576                         I 2 C 0
s Alouatta_juara.k141_1856473                                6156  4 +      7227 AC--------------A--T
i Alouatta_juara.k141_1856473                           I 2 C 0
s Alouatta_macconnelli.k141_1331706                          7070  4 -     10438 AC--------------A--T
i Alouatta_macconnelli.k141_1331706                     I 2 C 0
s Alouatta_nigerrima.k141_2718643                            3726  4 +      7047 AC--------------A--T
i Alouatta_nigerrima.k141_2718643                       I 3 C 0
s Alouatta_palliata.k141_1316127                             7012  4 +     10410 AC--------------A--T
i Alouatta_palliata.k141_1316127                        I 2 C 0
s Alouatta_puruensis.k141_1284840                             815  4 -      4927 AC--------------A--T
i Alouatta_puruensis.k141_1284840                       I 2 C 0
s Alouatta_seniculus.k141_990213                             3743  4 +      6429 AC--------------A--T
i Alouatta_seniculus.k141_990213                        I 2 C 0
s Ammotragus_lervia.NIVO01013474.1                        3517630  2 +   4113121 -a--------------a---
i Ammotragus_lervia.NIVO01013474.1                      C 0 I 3
s Anoura_caudifer.AnoCau_scaffold_422                      387824  4 -    631301 AA--------------G--G
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            28262  4 +     33004 AA--------------A--A
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 59461  4 +     78111 AC--------------A--T
i Aotus_azarae.k141_3170768                             I 2 C 0
s Aotus_griseimembra.k141_3275623                            2388  4 +     22701 AC--------------A--T
i Aotus_griseimembra.k141_3275623                       I 2 C 0
s Aotus_nancymaae.KZ196176.1                              5746346  4 +   9889416 ac--------------a--t
i Aotus_nancymaae.KZ196176.1                            I 2 C 0
s Aotus_trivirgatus.k141_1740727                             2931  4 -    104377 AC--------------A--T
i Aotus_trivirgatus.k141_1740727                        I 2 C 0
s Aotus_vociferans.k141_718647                               2939  4 +     23246 AC--------------A--T
i Aotus_vociferans.k141_718647                          I 2 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                      986  4 +      5067 GA--------------C--A
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      14931  4 +     17483 AA--------------G--G
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 6214  4 -     29036 AA--------------G--A
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9536203  4 +  39197703 AC--------------A--T
i Ateles_geoffroyi_b.tarseq_2582                           I 2 C 0
s Ateles_belzebuth.k141_1348307                             57487  4 +     85812 AC--------------A--T
i Ateles_belzebuth.k141_1348307                         I 2 C 0
s Ateles_chamek.k141_1072810                                 8486  4 +     89302 AC--------------A--T
i Ateles_chamek.k141_1072810                            I 2 C 0
s Ateles_geoffroyi_a.k141_1300742                             12996  4 -     58268 AC--------------A--T
i Ateles_geoffroyi_a.k141_1300742                         I 2 C 0
s Ateles_marginatus.k141_899112                             60982  4 +    119057 AC--------------A--T
i Ateles_marginatus.k141_899112                         I 2 C 0
s Ateles_paniscus.k141_1631200                               2933  4 -     25888 AC--------------A--T
i Ateles_paniscus.k141_1631200                          I 2 C 0
s Avahi_laniger.k141_2840928                                 3691  4 -     16375 AA--------------G--G
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                                11  4 +      2719 AA--------------G--G
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26377582  5 +  51448160 aa-------------ag--a
i Balaenoptera_acutorostrata.KI537095.1                 C 0 I 10
s Balaenoptera_bonaerensis.DF502048.1                        2813  5 -     13118 aa-------------ag--a
i Balaenoptera_bonaerensis.DF502048.1                   C 0 I 10
s Beatragus_hunteri.BeaHun_scaffold_21644                   40731  2 -     72089 -A--------------A---
i Beatragus_hunteri.BeaHun_scaffold_21644               I 2 I 3
s Bubalus_bubalis.KI419065.1                              1228461  3 -   1914593 -a--------------a--a
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               110827  1 -    171031 -------------------T
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                  9853  1 +    125063 -------------------T
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                11901  1 -    216513 -------------------T
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        4441  1 -    134917 -------------------T
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3217095  4 -   8989139 aa--------------a--g
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           394799  4 -  15254737 aa--------------a--g
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2970533  4 +   6889770 aa--------------a--g
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11515588  5 +  39901454 A-A-A-----------G--G
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   10605  6 +     87036 AAA-A-----------G--G
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11262247  7 -  35597290 aa-----------aaag--g
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11084776  7 +  39895921 aa-----------aaag--g
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16451810  2 -  44759192 aa------------------
i Canis_lupus_orion.HG994411.1                          C 0 I 3
s Capra_aegagrus.CM003214.1                              21322739  2 + 157394656 -a--------------a---
i Capra_aegagrus.CM003214.1                             C 0 I 3
s Capra_hircus.CM004562.1                               135703966  2 - 157403528 -a--------------a---
i Capra_hircus.CM004562.1                               C 0 I 3
s Capromys_pilorides.CapPil_scaffold_647363                  1471  4 +      1887 AA--------------G--G
i Capromys_pilorides.CapPil_scaffold_647363             C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               57006  4 +     67245 AA--------------G--G
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   27497  4 +     33760 AA--------------G--A
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   156301  4 -    276539 AA--------------A--G
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18887672  6 -  29618158 AT--------------ATGC
i Cebus_albifrons.Contig22                              I 2 C 0
s Cebus_olivaceus.k141_93739                                 5216  6 -     26817 AT--------------ATGC
i Cebus_olivaceus.k141_93739                            I 2 C 0
s Cebus_unicolor.k141_239009                                 9459  6 +     25043 AT--------------ATGC
i Cebus_unicolor.k141_239009                            I 2 C 0
s Ceratotherium_simum.JH767818.1                          4360799  4 +   7569818 aa--------------g--g
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623          554  4 -      9338 AA--------------G--G
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6551608  4 +   6739814 AT--------------T--T
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      53085  4 -     54931 AT--------------T--T
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         18069  4 -     19697 AT--------------T--T
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         55600  4 -    107033 AT--------------T--T
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        2041  4 -      3853 AT--------------T--T
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          25974  4 +     30494 AT--------------T--T
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           1998  4 -      4022 AT--------------T--T
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          1891  4 -      3505 AT--------------T--T
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           20695  4 +     35983 AT--------------T--T
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11987217  4 +  12117833 AT--------------T--T
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46473970  4 +  46592721 AT--------------T--T
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      31797  4 +     33420 AT--------------T--T
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        1833  4 -      3443 AT--------------T--T
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      2824  4 -      4669 AT--------------T--T
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        2624  4 -      4411 AT--------------T--T
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         2149  4 -      4205 AT--------------T--T
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_1070855           368  1 -      1715 -------------------A
i Chaetophractus_vellerosus.ChaVel_scaffold_1070855     I 1 C 0
s Cheirogaleus_major.k141_1157592                           55996  4 -     68416 AA--------------G--G
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            5042  4 +     13308 AA--------------G--G
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             2470  1 -     18223 -------------------T
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             19493  1 +     25473 -------------------T
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           38532  1 +     57117 -------------------T
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          43207  1 +     54541 -------------------T
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15958850  4 +  43084221 aa--------------c--G
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         68048  1 +    196370 -------------------T
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          12229  1 +     40510 -------------------T
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15135431  4 -  15256731 AT--------------T--T
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      30477  4 -     53260 AT--------------T--T
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101140926  4 + 101219884 at--------------t--t
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                13979  4 -     21363 AA--------------G--A
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           759285  4 +    964067 aa--------------g--a
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_141308              6077  4 -     12508 AA--------------G--T
i Chrysochloris_asiatica.ChrAsi_scaffold_141308         C 0 C 0
s Colobus_angolensis.KN985967.1                          10879505  4 +  10971483 aa--------------t--t
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147660663  4 + 156195979 AA--------------T--T
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            12650  4 +     23629 AA--------------T--T
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60610266  2 +  78930452 ----------------G--A
i Condylura_cristata.JH655880.1                         I 2 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         36713  4 -     40477 AA--------------A--G
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     I 5 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 274582  4 -    399297 AA--------------A--A
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53025781  4 +  72327488 AA--------------G--G
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             17023  4 -     19186 AA--------------G--G
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            48901  4 -     70449 AA--------------G--G
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 I 1
s Ctenodactylus_gundi.CteGun_scaffold_447                  205326  4 -    956709 TA--------------A--A
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 27529  4 -     67205 AA--------------G--G
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          179176  5 -   6883506 aa-------------tt--a
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16841863  4 +  31942871 AA--------------G--G
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80034328  5 -  96802777 aa-------------ag--a
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18696318  4 -  18957592 aa--------------g--a
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 319462  4 +    993696 aa--------------g--g
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_170113                  719  4 +       818 AA--------------G--G
i Diceros_bicornis.DicBicMic_scaffold_170113            C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   154742  4 +    228994 AA--------------A--A
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3652487  4 +   4240102 AT--------------A--C
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 24041  4 +     28912 AT--------------A--C
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Echinops_telfairi.JH980316.1                           22991569  4 -  44670279 AA--------------G--C
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                  9700  4 +     24177 AA--------------T--G
i Eidolon_helvum.KE772537.1                             I 1 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1488988  4 +   1727528 aa--------------a--a
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        236247  4 -    369425 aa--------------a--g
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           3256  4 -      7838 aa--------------a--g
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85868662  4 +  99434291 AA--------------G--G
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Equus_asinus.JREZ01000062.1                             5850180  4 -   7175178 aa--------------a--g
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13348682  4 +  41866177 aa--------------a--g
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          10172  4 +     92910 aa--------------a--g
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11529768  4 +  16010500 AA--------------G--C
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48767609  4 -  48907691 AT--------------T--T
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          312466  5 +    330699 AAA-------------G--A
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             58896  5 +     89355 AAA-------------G--A
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              2049  2 +     13586 AA------------------
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               1984  2 -      6809 AA------------------
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             8457  2 +     36558 AA------------------
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             4772  2 +     60246 AA------------------
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 8261  2 +    109717 AA------------------
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               12634  2 +     16540 AA------------------
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                12911  2 +     27497 AA------------------
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           15373  2 +     26808 AA------------------
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                30101  2 +     46535 AA------------------
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              12824  2 -     29447 AA------------------
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129889854  3 - 159252932 a---------------g--g
i Felis_catus.CM001386.2                                C 0 I 1
s Felis_catus_fca126.CM031420.1                         129276929  3 - 158578461 a---------------g--g
i Felis_catus_fca126.CM031420.1                         C 0 I 1
s Felis_nigripes.FelNig_flattened_line_8080                 18063  3 +     52776 A---------------G--G
i Felis_nigripes.FelNig_flattened_line_8080             C 0 I 1
s Galago_moholi.ctg555                                     207991  3 -    847004 A---------------G--G
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           10371  4 -     43889 AA--------------G--G
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           7442  4 +     27357 AG--------------G--G
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               153319  4 +    324696 AA--------------G--A
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    178510  3 -    189561 -a--------------a--a
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                            9717  4 -     18683 AA--------------G--A
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               2198  4 -     14630 AA--------------T--T
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119649297  4 - 195582420 aa--------------t--t
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   74266  4 +    118900 CA--------------A--A
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                         2619  2 +      3980 AA------------------
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             25094  2 +     26611 AA------------------
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             2555  2 +     56096 AA------------------
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        25830  2 -     42470 AA------------------
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        42425  2 -     54384 AA------------------
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              14109  4 +     53719 AA--------------G--G
i Helogale_parvula.HelPar_flattened_line_22962          C 0 I 1
s Hemitragus_hylocrius.HemHyl_scaffold_16669                24996  2 -     91191 -A--------------A---
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 I 3
s Hippopotamus_amphibius.HipAmp_scaffold_1308              144578  4 +    277961 AA--------------A--G
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      276023  4 -    477199 aa--------------t--g
i Hipposideros_armiger.JXIK01001085.1                   I 4 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              5180  4 -      9143 AA--------------T--G
i Hipposideros_galeritus.HipGal_scaffold_104691         I 4 C 0
s Hoolock_leuconedys.ctg79                                        88  4 -   7690867 AA--------------T--T
i Hoolock_leuconedys.ctg79                                 C 0 I 21
s Hyaena_hyaena.HyaHya_flattened_line_20729                 13177  4 -     67322 AA--------------G--G
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 I 1
s Hylobates_abbotti.k141_493872                              2015  4 +      5897 AA--------------T--T
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_282275                               1227  4 +      1846 AA--------------T--T
i Hylobates_agilis.k141_282275                          C 0 I 21
s Hylobates_klossii.k141_584463                               391  4 -      1009 AA--------------T--T
i Hylobates_klossii.k141_584463                         I 19 I 21
s Hylobates_pileatus_b.ContigUN                                 14621560  4 -  25970782 AA--------------T--T
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1133650                            1449  4 -      2775 AA--------------T--T
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             30052  4 -     60944 AA--------------T--T
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     3223  4 +     22540 AA--------------G--G
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7123111  4 +  13083262 AA--------------G--A
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_1884019                                    287  4 -      2196 AA--------------G--G
i Indri_indri.k141_1884019                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               6254  5 +     17520 AAA-------------G--A
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8562360  4 +  11848649 AA--------------A--A
i Jaculus_jaculus.JH725517.1                            C 0 I 274
s Kogia_breviceps.KogBre_flattened_line_35920               21084  5 +     37189 AAA-------------G--A
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          47055  4 -    147782 AT--------------A--T
i Lagothrix_lagothricha.k141_12968                      I 2 I 2
s Lasiurus_borealis.LasBor_scaffold_5102                   111078  4 -    115756 AA--------------G--G
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258404103  2 - 285822530 AA------------------
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        20990  4 +     39228 AA--------------G--G
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            50363  4 +     63517 AA--------------G--G
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        75584  4 +    116806 AA--------------G--G
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     28628  4 -     33031 AA--------------G--G
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3082878  4 -   3498232 aa--------------g--g
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    10084  4 +     22452 AA--------------G--G
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            133430  1 +   3060487 -------------------a
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19244696  4 +  19376315 AT--------------T--T
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            7742  4 +     84689 AA--------------G--G
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3775493  4 +   6799190 AA--------------G--G
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20588351  4 -  62548349 aa--------------g--g
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11084232  7 +  39895028 aa-----------aaag--g
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             16379  4 +     74745 AT--------------T--T
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12702885  4 +  12821369 AT--------------T--T
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               4981  4 +      6569 AT--------------T--T
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           43283  4 +     63263 AT--------------T--T
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_1068107                               11859  4 +     12679 AT--------------T--T
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                1432  4 +      3017 AT--------------T--T
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  43044  4 -     79256 AT--------------T--T
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196031962  4 + 196197964 AT--------------T--T
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11442068  4 +  11645122 AT--------------T--T
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   1991  4 -     46448 AT--------------T--T
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                1822  4 -      3617 AT--------------T--T
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 12154  4 -     55006 AT--------------T--T
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43837191  4 +  43892939 AT--------------T--T
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                4413  4 -      5978 AT--------------T--T
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               1996  4 -     27140 AT--------------T--T
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43433856  4 -  43563597 AT--------------T--T
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4446682  4 -   4543643 AT--------------T--T
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            143613  4 +    252755 aa--------------g--g
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             33687  4 +     58827 aa--------------g--g
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36870955  4 +  64221397 AA--------------G--G
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       61769  4 -    234502 AA--------------G--G
i Megaderma_lyra.MegLyr_scaffold_3562                   I 1 C 0
s Mellivora_capensis.MelCap_flattened_line_1828            226155  4 -    226874 AA--------------G--G
i Mellivora_capensis.MelCap_flattened_line_1828         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233                8699  4 +     15977 AA--------------A--G
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1043505  4 -  26018355 aa--------------a--g
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_183284                   1124  5 +      2166 AAA-------------G--A
i Mesoplodon_bidens.MesBid_scaffold_183284              C 0 C 0
s Microcebus_murinus.CM007691.1                          16507216  4 +  47401472 AT--------------G--G
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  28517  4 -     48017 GA--------------G--C
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               20166  4 -     32043 AA--------------G--G
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22816393  4 -  98408828 aa--------------a--g
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8206935  4 +  10048721 aa--------------a--g
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            31606  4 +     45743 AA--------------A--G
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        32511  4 +     34273 AT--------------T--T
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         8182  4 -    104932 AA--------------G--G
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     2621  4 +      8497 AT--------------G--G
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 143852  5 +    154973 AAA-------------G--A
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                158704  4 +    265003 AA--------------G--G
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 2095  3 -      4346 -A--------------A--A
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  141804  4 -    168139 AA--------------G--G
i Mungos_mungo.MunMun_flattened_line_8729               C 0 I 1
s Murina_feae.MurFea_scaffold_2254                          16591  4 -    100666 AA--------------G--G
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70763130  4 +  92629107 aa--------------a--g
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75486187  4 +  98207768 AA--------------A--G
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67552348  4 +  89017189 AA--------------A--G
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74327363  4 +  97876770 AA--------------A--G
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              8220  4 +     98495 AA--------------T--A
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4421045  4 -  28371801 aa--------------g--a
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     87167  4 -    117718 AA--------------G--T
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               964918  4 +   8389877 aa--------------a--g
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5016600  4 +   6462685 aa--------------a--g
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3462504  4 -   3747815 aa--------------a--g
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         7693  4 +     66751 AA--------------A--G
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             2567  4 -      8794 AA--------------G--A
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL204535.1                           2056943  1 +   2354432 ----------------A---
i Nannospalax_galili.KL204535.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               4894  4 +     48152 AA--------------T--T
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4481781  4 -  14209539 aa--------------g--g
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3948463  5 -   4490290 aa-------------ag--a
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  46824  4 +     94413 AA--------------T--G
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1223136                          10683  4 -     11253 AA--------------T--T
i Nomascus_annamensis.k141_1223136                      C 0 C 0
s Nomascus_concolor.k141_468488                              1326  4 -      1482 AA--------------T--T
i Nomascus_concolor.k141_468488                         C 0 C 0
s Nomascus_gabriellae.k141_906566                            1315  4 -      2544 TA--------------T--T
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             21789  4 -  18771707 AA--------------T--T
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_844529                                  1064  4 +      2124 AA--------------T--T
i Nomascus_siki_a.k141_844529                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                27227  5 +   3668941 a-------------aag--g
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65564071  4 -  95554990 AA--------------G--G
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                             916  4 +      6470 AA--------------G--G
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65666440  4 +  89412551 AA--------------G--G
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4993061  4 -  23139505 aa--------------g--a
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Odobenus_rosmarus.KB229369.1                             676438  4 -   3126709 aa--------------g--g
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1077223  4 +   1425656 aa--------------a--a
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         34382  4 +     78940 aa--------------a--a
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  121726  4 +    145789 AA--------------A--G
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  33666  3 +     62360 -A--------------A--G
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7222146  5 -   7562323 aa-------------ag--a
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              40602  4 -     66828 AA--------------G--G
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141872733  4 + 163896628 aa--------------g--g
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      304563  8 -    505867 aa----------aaaag--g
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       36081  4 +     38679 AA--------------G--G
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18005522  4 -  38779656 AA--------------G--G
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134074798  2 - 275406953 -a--------------a---
i Ovis_aries.CM001582.2                                 C 0 I 3
s Ovis_canadensis.OviCan_scaffold_6251                      76012  2 +    140051 -A--------------A---
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 I 3
s Pan_paniscus.CM003386.1                               127571542  4 - 205426864 aa--------------t--t
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120148695  4 - 196562556 aa--------------t--t
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  31252  4 +    295523 AA--------------G--G
i Panthera_onca.PanOnc_flattened_line_1615              C 0 I 1
s Panthera_pardus.KV860323.1                              3634853  4 +  18214204 aa--------------g--g
i Panthera_pardus.KV860323.1                            C 0 I 1
s Panthera_tigris.KE721879.1                              5024634  4 -   6340057 aa--------------g--g
i Panthera_tigris.KE721879.1                            C 0 I 1
s Pantholops_hodgsonii.KE114631.1                         1063656  2 -   1292953 -a--------------a---
i Pantholops_hodgsonii.KE114631.1                       C 0 I 3
s Papio_anubis.CM001492.2                               188152640  4 - 188283584 AT--------------T--T
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            48852  4 +     76494 AT--------------T--T
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47510037  4 +  47705337 AT--------------T--T
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 64019  4 -    104429 AT--------------T--T
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  13805  4 -     29451 AT--------------T--T
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                34208  4 +     35859 AT--------------T--T
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    112582  4 -    135482 AA--------------G--T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 I 1
s Perodicticus_ibeanus.k141_117958                           2127  4 -     23713 AA--------------G--G
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            21425  4 -     27972 AA--------------G--G
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      40033  4 -     45160 AT--------------G--T
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4946839  3 -   8017169 -a--------------a--g
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            118765  5 -    122454 AAA-------------G--A
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           1894  4 -      3310 AA--------------T--T
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       21800  4 -     82327 AA--------------T--T
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           18552  4 +     19957 AA--------------T--T
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26736561  4 +  26888534 aa--------------t--t
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            93685  4 +    112873 AA--------------G--G
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             40540  1 -     61926 -------------------T
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        21969  1 +     78826 -------------------T
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              5920  1 -     15800 -------------------T
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                         9118  1 -     16101 -------------------T
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          2427  1 +      9673 -------------------T
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13471421  1 -  19735023 -------------------T
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           10329  1 -     31692 -------------------T
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           2830  5 +     21690 AAA-------------G--A
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       19736  1 +     44506 -------------------T
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        19946  1 +     67491 -------------------T
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      10191  1 -     98129 -------------------T
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     19792  1 +    147771 -------------------T
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        20042  1 -     23762 -------------------T
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                           508  1 -     55515 -------------------T
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         19861  1 +    152463 -------------------T
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      6621  1 +      8943 -------------------T
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                          9581  1 +    134592 -------------------T
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          20171  1 -     75465 -------------------T
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              184088  4 -    373494 aa--------------t--t
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19803995  4 +  19899266 AA--------------T--T
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               2132  4 -     15069 AA--------------T--T
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              2266  4 +     14865 AA--------------T--T
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6845477  2 +  12164890 aa------------------
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     13935  4 -     30946 AA--------------G--G
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                          618  4 +     11805 AA--------------G--G
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           39954  4 +     52369 AA--------------G--G
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         32342  4 -     44753 AA--------------T--G
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            14263  4 +     27322 AA--------------G--G
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       13902  4 -     53241 AA--------------G--G
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         36174  4 -     48185 AA--------------G--G
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           30227  4 +     77221 AA--------------A--G
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            1371  3 -     27784 aa--------------t---
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        242924  4 -    344369 AA--------------G--G
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13243497  4 -  17261082 AA--------------T--G
i Pteropus_alecto.KB031157.1                            I 1 C 0
s Pteropus_vampyrus.KN525959.1                             601450  4 -   3946241 AA--------------T--G
i Pteropus_vampyrus.KN525959.1                          I 1 C 0
s Puma_concolor.QAVW01000427.1                          131531216  4 - 161321710 aa--------------g--g
i Puma_concolor.QAVW01000427.1                          C 0 I 1
s Pygathrix_cinerea.k141_374971                             26257  4 +     56732 AA--------------T--T
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6802748  4 +   6970761 AA--------------T--T
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             2141  4 +     18040 AA--------------T--T
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                13304  4 +     68503 AA--------------A--A
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13912273  4 +  90463843 AA--------------A--G
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1785120  4 +   2252614 AA--------------G--G
i Rhinolophus_sinicus.LVEH01000179.1                    I 4 C 0
s Rhinopithecus_bieti.k119_102124                           12694  4 -     14454 AA--------------T--T
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206374020  4 - 206558726 aa--------------t--t
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44851668  4 -  45163003 AA--------------T--T
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                16799  4 +    109198 TA--------------T--G
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            I 1 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       5090  2 +     12214 -A--------------A---
i Saiga_tatarica.SaiTat_scaffold_82192                  I 4 I 3
s Saimiri_boliviensis.NW_024100938.1                     15669650  4 -  43202129 at--------------a--c
i Saimiri_boliviensis.NW_024100938.1                    I 15 C 0
s Saimiri_cassiquiarensis.k141_808270                        1513  4 +     34089 AT--------------A--C
i Saimiri_cassiquiarensis.k141_808270                   I 15 C 0
s Saimiri_macrodon.k141_2087127                              1454  4 -     60842 AT--------------A--C
i Saimiri_macrodon.k141_2087127                         I 15 C 0
s Saimiri_oerstedii.k141_841116                              1535 18 +     67014 ATATATATATATATATA--C
i Saimiri_oerstedii.k141_841116                         I 15 C 0
s Saimiri_sciureus.k141_1947592                              1527  4 +     60816 AT--------------A--C
i Saimiri_sciureus.k141_1947592                         I 10 C 0
s Saimiri_ustus.k141_1282476                                 1468  4 -     76454 AT--------------A--C
i Saimiri_ustus.k141_1282476                            I 15 C 0
s Sapajus_apella.ctg10                                   17337976  6 -  30362882 AT--------------ATGC
i Sapajus_apella.ctg10                                  I 2 C 0
s Sapajus_macrocephalus.k141_966464                         17575  6 -     62485 AT--------------ATGC
i Sapajus_macrocephalus.k141_966464                     I 2 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   28862  2 -    114521 ----------------G--A
i Scalopus_aquaticus.ScaAqu_scaffold_9300               I 2 C 0
s Semnopithecus_entellus.k141_1527475                       24682  4 +     26421 AA--------------T--T
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       5142  4 +     20762 AA--------------T--T
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         38877  4 +     40653 AA--------------T--T
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                            9434  4 -     12194 AA--------------T--T
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     22856  4 -     27512 AA--------------T--T
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         31875  4 -     33692 AA--------------T--T
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   96458  4 -    120886 AA--------------A--A
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            15356  4 +    739146 AA--------------G--G
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17747736  3 -  27805282 aa--------------a---
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2237031  4 +   2842873 AA--------------G--A
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             231904  4 -    276980 AA--------------G--G
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            24468  4 +     62062 AA--------------G--G
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 I 1
s Sus_scrofa.CM000824.4                                 189269369  4 + 218635234 AA--------------A--G
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                     13898848  4 +  13920577 AA--------------T--T
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               3315  4 -      6213 AA--------------G--G
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               12241  4 +     45698 AA--------------G--A
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      804238  4 +   1148477 AA--------------G--G
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  54899  4 +     99546 AA--------------G--G
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194004176  4 - 194193292 AT--------------T--T
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  1124  5 +      6782 GAA-------------G--A
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  133377  4 -    259118 AA--------------A--G
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        23252  4 +     38948 AA--------------T--T
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   16979  4 -     32910 AA--------------T--T
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       22877  4 +     24652 AA--------------T--T
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      1755  4 -      3559 AA--------------T--T
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           39701  4 -     54611 AA--------------T--T
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       15700  4 +     17312 AA--------------T--T
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    23063  4 -     25040 AA--------------T--T
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          1729  4 +      3528 AA--------------T--T
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  48091  4 +     51589 AA--------------T--T
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       11267  4 +     14732 AA--------------T--T
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       1744  4 -     28054 AA--------------T--T
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44656539  4 -  44834318 AA--------------T--T
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        1549  4 +      3372 AA--------------T--T
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   2716  4 +     90398 AA--------------A--G
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 I 5
s Trichechus_manatus.JH594618.1                          16078822  4 +  31416278 aa--------------g--g
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2788680  3 -   3938065 ga--------------c---
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    1207  3 +     13056 GA--------------C---
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69310864  5 -  96451834 aa-------------ag--a
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 24064  4 -     25548 AA--------------G--G
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6511483  4 +  28682327 aa--------------g--g
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  2317  2 -     20643 AA------------------
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             21861  2 -     33872 AA------------------
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1522174  4 -   2331223 AA--------------A--G
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                134633  7 -    281493 A-A-A-A-A-------G--G
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       124130  4 -    134049 AA--------------G--G
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        211163  4 -    227762 AA--------------G--G
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     12346  4 -     20485 AA--------------A--A
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           4366  5 -      8775 AAA-------------G--A
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Procavia_capensis.ProCapCap_scaffold_15315                73444  0 +     78963 C
e Heterohyrax_brucei.HetBruBak_scaffold_25354               53580  0 +     73687 C
e Elephantulus_edwardii.JH947210.1                        7803762  0 +  15467074 C
e Bos_taurus.CM000177.6                                 136292828  0 - 158972876 C
e Bos_mutus.JH883513.1                                     569472  8 -    998990 I
e Bos_indicus.CM003021.1                                138137095  0 - 161108492 C
e Bison_bison.KN264915.1                                  6556860  0 +   6870073 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16291  1 -    119109 I
e Tarsius_wallacei.k141_48636                               56884  0 +     65473 C
e Tarsius_lariang.k141_609102                               23568  0 +     42269 C
e Octodon_degus.JH651621.1                                3678743 1836 +  10294119 I
e Heterocephalus_glaber.JH602058.1                        2548028 229 +  31725842 I
e Fukomys_damarensis.KN123630.1                          13889876  0 -  19261668 C
e Dolichotis_patagonum.DolPat_scaffold_14102                33375  0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             56104 16 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                14631 16 +     26546 I
e Cephalopachus_bancanus.k141_702587                         5124  0 +     21754 C
e Cavia_tschudii.CavTsc_scaffold_488                       173989  0 +    436027 C
e Cavia_porcellus.DS562889.1                             15795798  0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15783848 16 -  24422027 I
e Carlito_syrichta.NW_007248099.1                          306087  0 +    345090 C

a score=0.000000
s hg38.chr4_GL000008v2_random                                8803 21 +    209709 A---T--AGT----GAATT----TT-A--CATG----T-AT--G
s Acinonyx_jubatus.LLWD01000356.1                         2030881 19 +   3721120 -------tat----gaatT----TT-A--CTTG----T-AA--A
i Acinonyx_jubatus.LLWD01000356.1                       I 1 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    109162 23 -    189883 G---T--TTT----GTATT----TT-ATATATG----C-AA--A
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10654214 21 +  23371972 a---t--tgt----gaaTT----TT-A--CTTG----T-AA--A
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7090952  3 -  16596857 ---------------------------------------aa--a
i Ailurus_fulgens.LNAC01000003.1                        I 5 C 0
s Allactaga_bullata.AllBul_scaffold_70162                    9899 21 -     22067 a---T--GAT----GAATT----TT-A--CATGCA--T-A----
i Allactaga_bullata.AllBul_scaffold_70162               I 221 C 0
s Allenopithecus_nigroviridis.k141_3103707                  59816 21 +     61638 A---T--AGT----GAATT----TT-A--CATG----T-AT--G
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        51624 21 +     53391 A---T--AGT----GAATT----TT-A--CATG----T-AT--G
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         2349 21 +     72529 A---T--AGT----GAATT----TT-A--CATG----T-AT--G
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          1924 21 +      3797 A---T--AGT----GAATT----TT-A--CATG----T-AT--G
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             7106 21 -     18050 A---C--AGA----GAATT----TT-A--CATG----T-AG--A
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  8217 21 -     11521 A---C--AGA----GAATT----TT-A--CATG----T-AG--A
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              7783 21 -     21359 A---C--AGA----GAATT----TT-A--CATG----T-AG--A
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1856473                                6160 21 +      7227 A---C--AGA----GAATT----TT-A--CATG----T-AG--A
i Alouatta_juara.k141_1856473                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          7074 21 -     10438 A---C--AGA----GAATT----TT-A--CATG----T-AG--A
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            3730 21 +      7047 A---C--AGA----GAATT----TT-A--CATG----T-AG--A
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             7016 21 +     10410 A---C--AGA----GAATT----TT-A--CATG----T-AG--A
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                             819 21 -      4927 A---C--AGA----GAATT----TT-A--CATG----T-AG--A
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             3747 21 +      6429 A---C--AGA----GAATT----TT-A--CATG----T-AG--A
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3517635 20 +   4113121 ----t--tgt----tgaTT----TT-A--CATG----C-AA--A
i Ammotragus_lervia.NIVO01013474.1                      I 3 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      387828 20 -    631301 A---C--TGC----ATATT----CT-A--CATG----T-A---A
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            28266 24 +     33004 AGATT--TGT----TGATT----TT-A--CATG----C-AA--A
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 59465 21 +     78111 A---T--AGT----GAATT----TT-A--CATG----T-AC--A
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            2392 21 +     22701 A---T--AGT----GAATT----TT-A--CATG----T-AC--A
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5746350 21 +   9889416 a---g--agt----GAATT----TT-A--CATG----T-AC--A
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             2935 21 -    104377 A---T--AGT----GAATT----TT-A--CATG----T-AC--A
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               2943 21 +     23246 A---T--AGT----GAATT----TT-A--CATG----T-AC--A
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                      990 17 +      5067 ---------T----GAACT----TC-A--CATG----T-AA--A
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      14935 21 +     17483 A---T--AGT----GAATT----TT-A--CATG----T-AA--A
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 6218 23 -     29036 A---T--TGC----ACATT----CT-A--CTTG----T-AAAAA
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9536207 21 +  39197703 A---T--AGT----GAATT----TT-A--CATG----T-AG--A
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             57491 21 +     85812 A---T--AGT----GAATT----TT-A--CATG----C-AG--A
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 8490 21 +     89302 A---T--AGT----GAATT----TT-A--CATG----T-AG--A
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             13000 21 -     58268 A---T--AGT----GAATT----TT-A--CATG----T-AG--A
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             60986 21 +    119057 A---T--AGT----GAATT----TT-A--CATG----T-AG--A
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               2937 21 -     25888 A---T--AGT----GAATT----TT-A--CATG----T-AG--A
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 3695 21 -     16375 A---T--AGT----GAATT----TT-A--CATG----T-AA--A
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                                15 21 +      2719 A---T--AGT----GAATT----TT-A--CATG----T-AA--A
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26377597  9 +  51448160 --------------------------A--CATG----T-AA--A
i Balaenoptera_acutorostrata.KI537095.1                 I 10 C 0
s Balaenoptera_bonaerensis.DF502048.1                        2828  9 -     13118 --------------------------A--CATG----T-AA--A
i Balaenoptera_bonaerensis.DF502048.1                   I 10 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   40736 20 -     72089 ----T--TGT----CGATT----TT-A--CATG----C-AA--A
i Beatragus_hunteri.BeaHun_scaffold_21644               I 3 C 0
s Bubalus_bubalis.KI419065.1                              1228464 24 -   1914593 ggata--tgt----cAATT----TT-A--CATG----C-AA--A
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               110828 21 -    171031 A---T--AGT----GAATT----TT-A--CATG----T-AC--A
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                  9854 21 +    125063 A---T--AGT----GAATT----TT-A--CATG----T-AC--A
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                11902 21 -    216513 A---T--AGT----GAATT----TT-A--CATG----T-AC--A
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        4442 21 -    134917 A---T--AGT----GAATT----TT-A--CATG----T-AC--A
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3217099 25 -   8989139 a---t--tgt----gaatttttttt-a--catg----t-aa--a
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           394803 25 -  15254737 a---t--tgt----gaatttttttt-a--catg----t-aa--a
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2970537 25 +   6889770 a---t--tgt----gaatttttttt-a--catg----t-aa--a
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11515593 21 +  39901454 A---T--TGT----ATATT----TT-A--CTTG----T-AA--A
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   10611 21 +     87036 A---T--TGT----ATATT----TT-A--CTTG----T-AA--A
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11262254 21 -  35597290 a---t--tgt----ataTT----TT-A--CTTG----T-AA--A
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11084783 21 +  39895921 a---t--tgt----ataTT----TT-A--CTTG----T-AA--A
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16451815 13 -  44759192 -----------------tt----tt-a--cttg----t-aA--A
i Canis_lupus_orion.HG994411.1                          I 3 C 0
s Capra_aegagrus.CM003214.1                              21322744 18 + 157394656 ----t--tgt----tgatT----TT-A--CATG----C-A----
i Capra_aegagrus.CM003214.1                             I 3 C 0
s Capra_hircus.CM004562.1                               135703971 18 - 157403528 ----t--tgt----tgaTT----TT-A--CATG----C-A----
i Capra_hircus.CM004562.1                               I 3 C 0
s Capromys_pilorides.CapPil_scaffold_647363                  1475 12 +      1887 A---C--TGC----GATTA----TT-------------------
i Capromys_pilorides.CapPil_scaffold_647363             C 0 I 27
s Carlito_syrichta.NW_007248099.1                          306087 18 +    345090 --------gt----gaatt----tt-a--caTG----T-AA--A
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               57010 23 +     67245 A---T--TGC----ACATT----CT-A--CTTG----T-AAAAA
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   27501 21 +     33760 A---T--GGG----GAATA----CA-A--CATG----C-AG--A
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   156305 21 -    276539 A---T--TGA----GAATT----TT-A--CATG----T-AA--A
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18887678 21 -  29618158 A---T--AGT----GCATT----TT-A--CATG----T-AC--A
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 5222 21 -     26817 A---T--AGT----GCATT----TT-A--CATG----T-AC--A
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                 9465 21 +     25043 A---T--AGT----GCATT----TT-A--CATG----T-AC--A
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         5124 18 +     21754 --------GT----GAATT----TT-A--CATG----T-AA--A
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4360803 21 +   7569818 a---t--tgt----gAATT----TT-A--CATG----T-AA--A
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623          558 21 -      9338 A---T--TGT----GAATT----TT-A--CATG----T-AA--A
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6551612 15 +   6739814 A---T--AGt----gaatt----tt-a--ca-------------
i Cercocebus_atys.KQ010443.1                            C 0 I 2
s Cercocebus_chrysogaster.k141_2951608                      53089 15 -     54931 A---T--AGT----GAATT----TT-A--CA-------------
i Cercocebus_chrysogaster.k141_2951608                  C 0 I 2
s Cercocebus_lunulatus.k141_3387186                         18073 15 -     19697 A---T--AGT----GAATT----TT-A--CA-------------
i Cercocebus_lunulatus.k141_3387186                     C 0 I 2
s Cercocebus_torquatus.k141_3969582                         55604 15 -    107033 A---T--AGT----GAATT----TT-A--CA-------------
i Cercocebus_torquatus.k141_3969582                     C 0 I 2
s Cercopithecus_ascanius.k141_3371259                        2045 21 -      3853 A---T--AGT----GAATT----TT-A--CATG----T-AT--G
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          25978 21 +     30494 A---T--AGT----GAATT----TT-A--CATG----T-AT--G
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           2002 21 -      4022 A---T--AGT----GAATT----TT-A--CATG----T-AT--G
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          1895 21 -      3505 A---T--AGT----GAATT----TT-G--CATG----T-AT--G
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           20699 21 +     35983 A---T--AGT----GAATT----TT-A--CATG----T-AT--G
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11987221 21 +  12117833 A---T--AGT----GAATT----TT-A--CATG----T-AT--G
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46473974 21 +  46592721 A---T--AGT----GAATT----TT-A--CATG----T-AT--G
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      31801 21 +     33420 A---T--AGT----GAATT----TT-A--CATG----T-AT--G
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        1837 21 -      3443 A---T--AGT----GAATT----TT-A--CATG----T-AT--G
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      2828 21 -      4669 A---T--AGT----GAATT----TT-A--CATG----T-AT--G
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        2628 21 -      4411 A---T--AGT----GAATT----TT-A--CATG----T-AT--G
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         2153 21 -      4205 A---T--AGT----GAATT----TT-A--CATG----T-AT--G
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_1070855           369 21 -      1715 A---T--TAC----AAATT----TT-A--CATT----T-AA--G
i Chaetophractus_vellerosus.ChaVel_scaffold_1070855     C 0 C 0
s Cheirogaleus_major.k141_1157592                           56000 21 -     68416 A---G--GGT----GGATT----TT-A--CATG----T-AA--A
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            5046 21 +     13308 A---G--GGT----GAATT----TT-A--CATG----T-AA--A
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             2471 21 -     18223 A---T--AGT----GAATT----TT-A--TATG----T-AC--A
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             19494 21 +     25473 A---T--AGT----GAATT----TT-A--TATG----T-AT--A
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           38533 21 +     57117 A---T--AGT----GAATT----TT-A--TATG----T-AC--A
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          43208 21 +     54541 A---T--AGT----GAATT----TT-A--TATG----T-AC--A
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15958854 12 +  43084221 A---C--TGT----GACTG----TT-------------------
i Chinchilla_lanigera.JH721867.1                        C 0 I 9
s Chiropotes_israelita.k141_1189915                         68049 21 +    196370 A---T--AGT----GAATT----TT-A--CATG----T-AC--A
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          12230 21 +     40510 A---T--AGT----GAATT----TT-A--CATG----T-AC--A
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15135435 21 -  15256731 A---T--AGT----GAATT----TT-A--CATG----T-AT--G
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      30481 21 -     53260 A---T--AGT----GAATT----TT-A--CATG----T-AT--G
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101140930 21 + 101219884 a---t--agt----gAATT----TT-A--CATG----T-AT--A
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                13983 19 -     21363 A---T--GGC----AAATT----TT-A--CATG----T-A----
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           759289 19 +    964067 a---t--ggc----aAATT----TT-A--CATG----T-A----
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_141308              6081 21 -     12508 A---T--TGT----GGATT----TT-A--CATG----T-AA--A
i Chrysochloris_asiatica.ChrAsi_scaffold_141308         C 0 C 0
s Colobus_angolensis.KN985967.1                          10879509 21 +  10971483 a---t--agt----gaatT----TT-A--CATA----T-AT--G
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147660667 21 + 156195979 A---T--AGT----GAATT----TT-A--CATG----T-AT--G
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            12654 21 +     23629 A---T--AGT----GAATT----TT-A--CATG----T-AT--G
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60610268 21 +  78930452 A---T--TGT----TAGTT----TT-A--TATG----T-AA--A
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         36717 23 -     40477 A---T--TGT----GAATT----TT-A--TATG----T-AAAAT
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 274586 21 -    399297 A---C--TTA----CAATT----TT-A--TATG----C-AA--A
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53025785 21 +  72327488 A---T--TTT----GAATT----TT-A--CTTT----C-AA--A
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             17027 21 -     19186 A---T--TTT----GAATT----TT-A--TATG----T-AA--T
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            48906 19 -     70449 -------TGT----GAATT----TT-A--CTTG----T-AA--A
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 1 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  205330 21 -    956709 A---T--ACT----GATTA----TT-A--CATG----T-AA--A
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 27533 12 -     67205 A---A--CGT----GATTA----TT-------------------
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 I 100
s Dasypus_novemcinctus.JH568778.1                          179181 21 -   6883506 a---t--tac----aaatt----tT-A--CATT----T-AA--G
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16841867 21 +  31942871 A---T--AGT----GAATT----TT-A--CACG----T-AA--A
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80034333 21 -  96802777 a---t--tgt----gaatT----AT-A--CATG----T-AA--A
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18696322 23 -  18957592 a---t--tgc----acatt----ct-a--catt----t-aaaaa
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 319466 21 +    993696 a---t--tgt----gaatt----tt-a--tatg----t-aa--a
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_170113                  723 21 +       818 A---T--TGT----GAATT----TT-A--CATG----T-AA--A
i Diceros_bicornis.DicBicMic_scaffold_170113            C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   154746 12 +    228994 T---C--TAT----GATTA----TT-------------------
i Dinomys_branickii.DinBra_scaffold_1996                C 0 I 9
s Dipodomys_ordii.KN672545.1                              3652491 13 +   4240102 A---T--GGT----AAATT----CC-A-----------------
i Dipodomys_ordii.KN672545.1                            C 0 I 2
s Dipodomys_stephensi.DipSte_scaffold_44365                 24045 13 +     28912 A---T--GGT----AAATT----AC-A-----------------
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 I 2
s Echinops_telfairi.JH980316.1                           22991573 22 -  44670279 A---T--TGT----GAATT----TT-A--CATG----TAAA--G
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                  9704 23 +     24177 A---TTGT------GAATT----TC-A--CACA----T-AAAAA
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1488992 24 +   1727528 aggtt--tgt----caatt----tt-a--caTG----C-AA--A
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7803762 19 +  15467074 --------gt----GAATT----ATAA--CATG----T-AA--A
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        236251 21 -    369425 a---t--ttt----gaaGT----TT-A--CATA----C-AA--A
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           3260 21 -      7838 a---t--ttt----gaatt----tt-a--cata----C-AA--A
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85868666 21 +  99434291 A---T--TGT----GAATT----TT-A--CTTG----T-AA--A
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Equus_asinus.JREZ01000062.1                             5850184 21 -   7175178 a---t--tgt----gaaTT----TT-A--CATG----T-AA--A
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13348686 21 +  41866177 a---t--tgt----gaaTT----TT-A--CATG----T-AA--A
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          10176 21 +     92910 a---t--tgt----gaaTT----TT-A--CATG----T-AA--A
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11529772 21 +  16010500 A---C--CGT----AAATT----TT-A--TAGA----T-GA--G
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48767613 21 -  48907691 A---T--AGT----GAATT----TT-A--CATG----T-AT--G
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          312471 21 +    330699 A---T--TGT----GAATT----AT-A--CATG----T-AA--A
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             58901 21 +     89355 A---T--TGT----GAATT----AT-A--CATG----T-AA--A
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              2051 17 +     13586 ---------T----GAATT----TT-A--CATG----T-AA--A
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               1986 17 -      6809 ---------T----GAATT----TT-A--CATG----T-AA--A
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             8459 17 +     36558 ---------T----GAATT----TT-A--CATG----T-AA--A
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             4774 17 +     60246 ---------T----GAATT----TT-A--CATG----T-AA--A
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 8263 17 +    109717 ---------T----GAATT----TT-A--CATG----T-AA--A
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               12636 17 +     16540 ---------T----GAATT----TT-A--CATG----T-AA--A
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                12913 17 +     27497 ---------T----GAATT----TT-A--CATG----T-AA--A
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           15375 17 +     26808 ---------T----GAATT----TT-A--CATG----T-AA--A
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                30103 17 +     46535 ---------T----GAATT----TT-A--CATG----T-AA--A
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              12826 17 -     29447 ---------T----GAATT----TT-A--CATG----T-AA--A
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129889858 19 - 159252932 -------tat----gaaTT----TT-A--CTTG----T-AA--A
i Felis_catus.CM001386.2                                I 1 C 0
s Felis_catus_fca126.CM031420.1                         129276933 19 - 158578461 -------tat----gaatT----TT-A--CTTG----T-AA--A
i Felis_catus_fca126.CM031420.1                         I 1 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 18067 19 +     52776 -------TAT----GAATT----TT-A--CTTG----T-AA--A
i Felis_nigripes.FelNig_flattened_line_8080             I 1 C 0
s Galago_moholi.ctg555                                     207994 21 -    847004 A---T--AGT----GAGTT----TT-A--CACA----T-AA--A
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           10375 21 -     43889 A---T--AGT----GAGTT----TT-A--CACA----T-AA--A
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           7446 21 +     27357 A---T--AGT----GAATT----TT-A--CATG----T-AC--A
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               153323 20 +    324696 ----T--GGT----GAATA----TT-A--CATG----T-AA--A
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    178513 24 -    189561 agatt--tgt----cgATT----TT-A--CATG----C-AA--A
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                            9721 25 -     18683 A---T--GAT----GAATT----TT-G--CATGCAAGT-AA--A
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               2202 21 -     14630 A---T--AGT----GAATT----TT-A--CATG----T-AT--G
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119649301 21 - 195582420 a---t--agt----gaaTT----TT-A--CATG----T-AT--G
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   74270 25 +    118900 A---T--GGT----GAATT----TT-A--CATGCAAGT-AA--A
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                         2621 17 +      3980 ---------T----GAAGT----TT-A--CATA----C-AA--A
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             25096 17 +     26611 ---------T----GAAGT----TT-A--CATA----T-AA--A
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             2557 17 +     56096 ---------T----GAAGT----TT-A--CATA----T-AA--A
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        25832 17 -     42470 ---------T----GAAGT----TT-A--CATA----T-AA--A
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        42427 17 -     54384 ---------T----GAAGT----TT-A--CATA----T-AA--A
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              14114 19 +     53719 -------TGT----GAACT----TT-A--CTTG----T-AA--A
i Helogale_parvula.HelPar_flattened_line_22962          I 1 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                25001 20 -     91191 ----T--TGT----TGATT----TT-A--CATG----C-AA--A
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 3 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               53580 15 +     73687 ---------------AATT----TT-A--CATG----T-CA--A
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              144582 19 +    277961 A---T--T------GAATT----TT-A--CATG----T-AA--A
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      276027 21 -    477199 a---c--t------gaatt----tt-a--CATG----G-AAAAT
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              5184 23 -      9143 A---C--TGT----GAATT----TT-A--CATG----G-AAAAT
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg649                                    98881 21 +    115816 A---T--AGT----GAATT----TT-A--CATG----T-AC--G
i Hoolock_leuconedys.ctg649                                I 7 I 335
s Hyaena_hyaena.HyaHya_flattened_line_20729                 13182 18 -     67322 -------TGT----GAATT----TT-A---GAG----T-AA--A
i Hyaena_hyaena.HyaHya_flattened_line_20729             I 1 C 0
s Hylobates_abbotti.k141_493872                              2019 21 +      5897 A---T--AGT----GAATT----TT-A--CATG----T-AC--A
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_1485652                               445 21 -      1697 A---T--AGT----GAATT----TT-A--CATG----T-AC--G
i Hylobates_agilis.k141_1485652                         I 169 I 50
s Hylobates_klossii.k141_466549                              8471 21 +     11537 A---T--AGT----GAATT----TT-A--CATG----T-GC--A
i Hylobates_klossii.k141_466549                         I 4 I 114
s Hylobates_pileatus_b.ContigUN                                 14621564 21 -  25970782 A---T--AGT----GAATT----TT-A--TATG----T-AC--G
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1133650                            1453 21 -      2775 A---T--AGT----GAATT----TT-A--CATG----T-AC--G
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             30056 21 -     60944 A---T--AGT----GAATT----TT-A--CATG----T-AC--G
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     3227 21 +     22540 A---C--TGT----GATTA----TT-A--TATG----T-AA--A
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7123115 21 +  13083262 A---T--GGT----AAACA----TT-G--AATA----T-GA--A
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_1884019                                    291 19 -      2196 A---T--AGT----GAATT----TT-A--TGTG----T-A----
i Indri_indri.k141_1884019                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               6259 21 +     17520 A---T--TGT----GAATT----AT-A--CATG----T-AA--A
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8562638  2 +  11848649 -------------------------------------N-N----
i Jaculus_jaculus.JH725517.1                            I 274 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               21089 21 +     37189 A---T--TGT----GAATT----AT-A--CATG----T-AA--A
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          47061 21 -    147782 A---T--AGT----GAATT----TT-A--CATG----T-AG--A
i Lagothrix_lagothricha.k141_12968                      I 2 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   111082 23 -    115756 A---T--TGC----AAATT----TT-A--CATG----T-AAAAA
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258404105 17 - 285822530 ---------T----GAAGT----TT-A--CATA----T-AA--A
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        20994 21 +     39228 A---T--AGT----GAATT----TT-A--CATG----T-AA--A
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            50367 21 +     63517 A---T--AGT----GAATT----TT-A--CATG----T-AA--A
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        75588 21 +    116806 A---T--AGT----GAATT----TT-A--CATG----T-AA--A
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     28632 21 -     33031 A---T--AGT----GAATT----TT-A--CATG----T-AA--A
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3082882 21 -   3498232 a---T--TGT----GAATT----TT-A--CTTG----T-AA--A
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    10088 21 +     22452 A---T--GGT----GAATT----TT-A--CTTG----T-CA--A
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            133431 21 +   3060487 a---t--tgt----gaatt----at-a--CATG----T-GA--A
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19244700 15 +  19376315 A---T--AGT----GAATT----TT-A--CA-------------
i Lophocebus_aterrimus.ctg55                            C 0 I 2
s Loris_lydekkerianus.k141_550999                            7746 21 +     84689 A---T--AGT----GCATT----TT-A--CATG----T-AA--A
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3775497 21 +   6799190 A---T--AGT----GCATT----TT-A--CATG----T-AA--A
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20588355 21 -  62548349 a---t--tgt----gaatt----tt-a--catg----t-aa--a
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11084239 21 +  39895028 a---t--tgt----atATT----TT-A--CTTG----T-AA--A
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             16383 21 +     74745 A---T--AGT----GAATT----TT-A--CATG----T-AT--G
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12702889 21 +  12821369 A---T--AGT----GAATT----TT-A--CATG----T-AT--G
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               4985 21 +      6569 A---T--AGT----GAATT----TT-A--CATG----T-AT--G
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           43287 21 +     63263 A---T--AGT----GAATT----TT-A--CATG----T-AT--G
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_1068107                               11863 21 +     12679 A---T--AGT----GAATT----TT-A--CATG----T-AT--G
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                1436 21 +      3017 A---T--AGT----GAATT----TT-A--CATG----T-AT--G
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  43048 21 -     79256 A---T--AGT----GAATT----TT-A--CATG----T-AT--G
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196031966 21 + 196197964 A---T--AGT----GAATT----TT-A--CATG----T-AT--G
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11442072 21 +  11645122 A---T--AGT----GAATT----TT-A--CATG----T-AT--G
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   1995 21 -     46448 A---T--AGT----GAATT----TT-A--CATG----T-AT--G
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                1826 21 -      3617 A---T--AGT----GAATT----TT-A--CATG----T-AT--G
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 12158 21 -     55006 A---T--AGT----GAATT----TT-A--CATG----T-AT--G
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43837195 21 +  43892939 A---T--AGT----GAATT----TT-A--CATG----T-AT--G
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                4417 21 -      5978 A---T--AGT----GAATT----TT-A--CATG----T-AT--G
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               2000 21 -     27140 A---T--AGT----GAATT----TT-A--CATG----T-AT--G
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43433860 15 -  43563597 A---T--AGT----GAATT----TT-A--CA-------------
i Mandrillus_leucophaeus.scaffold125                    C 0 I 2
s Mandrillus_sphinx.Contig144                             4446686 15 -   4543643 A---T--AGT----GAATT----TT-A--CA-------------
i Mandrillus_sphinx.Contig144                           C 0 I 2
s Manis_javanica.JSZB01003966.1                            143617 20 +    252755 a---t--tat----gAGT-----TT-A--CCTG----T-AA--A
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             33691 20 +     58827 a---t--tgt----gGGT-----TT-A--CCTG----T-AA--A
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36870959 21 +  64221397 A---T--GGT----AAACA----TT-G--AATA----T-GA--A
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       61773 22 -    234502 A---C--TG-----GAATT----TT-A--CATG----T-AAAAT
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_1828            226159 21 -    226874 A---T--TGT----TAATT----TT-A--CTTG----T-AA--A
i Mellivora_capensis.MelCap_flattened_line_1828         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233                8703 21 +     15977 G---T--TGT----GAATT----TT-A--TATG----C-AA--A
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1043509 21 -  26018355 a---t--ttt----gaatt----tt-a--catA----C-AA--G
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_183284                   1129 21 +      2166 A---T--TGT----GAATT----AT-A--CATG----T-AA--A
i Mesoplodon_bidens.MesBid_scaffold_183284              C 0 C 0
s Microcebus_murinus.CM007691.1                          16507220 21 +  47401472 A---T--AGT----GAATT----TT-A--CATG----T-AA--A
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  28521 21 -     48017 A---T--TTT----ACATT----GT-G--CATT----A-AA--G
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               20170 23 -     32043 A---C--TGC----ACATT----CT-A--CATG----T-AAAAA
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22816397 21 -  98408828 a---t--ttt----gaatt----tt-a--cata----C-AA--G
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8206939 26 +  10048721 g---t--tgcaaacaaatt----tt-a--catg----t-aa-aa
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            31610 26 +     45743 G---T--TGCAAGCAAATT----TT-A--CATG----T-AAA-A
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        32515 21 +     34273 A---T--AGT----GAATT----TT-A--CATG----T-AT--G
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         8186 21 -    104932 A---T--TGT----GAATT----TT-A--CTTG----T-AA--A
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     2625 21 +      8497 A---A--AGT----GAATT----TT-A--CATG----T-AA--A
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 143857 21 +    154973 A---T--TGT----GAATT----AT-A--CATG----T-AA--A
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                158708 23 +    265003 A---T--TGC----AAATT----TT-A--CATG----T-AAAAG
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 2098 24 -      4346 TGATA--TGT----CGATT----TT-A--CATG----C-AA--A
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  141809 19 -    168139 -------TGT----GAATT----TT-A--CTTG----T-AA--A
i Mungos_mungo.MunMun_flattened_line_8729               I 1 C 0
s Murina_feae.MurFea_scaffold_2254                          16595 23 -    100666 A---T--TGC----AAATT----TT-A--CATG----T-AAAAA
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70763134 21 +  92629107 a---t--ttt----caaTT----TC-A--CATG----A-AA--A
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75486191 21 +  98207768 G---T--TTT----GAATT----TC-A--CATG----A-AA--A
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67552352 21 +  89017189 A---T--TTT----GAATT----TT-A--CATG----A-AA--A
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74327367 21 +  97876770 G---T--TTT----GAATT----TC-A--CATG----A-AA--A
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              8224 25 +     98495 A---T--GGT----GACTT----TT-A--CATGCAAGT-AA--A
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4421049 21 -  28371801 g---t--tgt----gaaTT----TT-A--CTTG----T-AA--A
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     87171 12 -    117718 A---C--TGT----GATTG----TC-------------------
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 I 20
s Myotis_brandtii.KE161952.1                               964922 23 +   8389877 a---t--tgc----aaATT----TT-A--CATG----T-AAAAA
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5016604 23 +   6462685 a---a--tcc----aaatt----tT-A--CATG----T-AAAAA
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3462508 23 -   3747815 a---t--tgc----aaatt----tt-a--catg----t-aaaaa
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         7697 23 +     66751 A---A--TCC----AAATT----TT-A--CATG----C-AAAAA
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             2571 21 -      8794 A---T--TGT----AATTT----TT-A--CATG----T-AA--A
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL204535.1                           2056944 21 +   2354432 G---T--GTT----GAATT----TT-A--TATG----C-AA--A
i Nannospalax_galili.KL204535.1                         C 0 I 4
s Nasalis_larvatus.k141_153429                               4898 21 +     48152 A---T--AGT----GAATT----TT-A--CATG----T-AT--G
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4481785 21 -  14209539 a---t--tgt----gaATT----TT-A--CTTG----T-AA--A
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3948468 21 -   4490290 a---t--tgt----gaatT----AT-A--CATG----T-AA--A
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  46828 23 +     94413 A---T--TGC----AAATT----AT-A--CATA----A-AAGAA
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1223136                          10687 21 -     11253 A---T--AGT----GAATT----TT-A--CATG----T-AC--A
i Nomascus_annamensis.k141_1223136                      C 0 C 0
s Nomascus_concolor.k141_468488                              1330 21 -      1482 A---T--AGT----GAATT----TT-A--CATG----T-AC--A
i Nomascus_concolor.k141_468488                         C 0 C 0
s Nomascus_gabriellae.k141_906566                            1319 21 -      2544 A---T--AGT----GAATT----TT-A--CATG----T-AC--A
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             21793 21 -  18771707 A---T--AGT----GAATT----TT-A--CATG----T-AC--G
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_844529                                  1068 21 +      2124 A---T--AGT----GAATT----TT-A--CATG----T-AC--A
i Nomascus_siki_a.k141_844529                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                27232 21 +   3668941 a---t--tgt----ataTT----TT-A--CTTG----T-AA--A
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65564075 21 -  95554990 A---T--AGT----GCATT----TT-A--CATG----T-AA--A
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                             920 21 +      6470 A---T--AGT----GCATT----TT-A--CATG----T-AA--A
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65666444 21 +  89412551 A---T--AGT----GCATT----TT-A--CATG----T-AA--A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4993065 19 -  23139505 a---t--ggt----gAGTT----TT-A----TG----T-CA--A
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Odobenus_rosmarus.KB229369.1                             676442 21 -   3126709 a---T--TGT----GAATT----TT-A--CTTG----T-AA--A
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1077227 22 +   1425656 agatt--tgg----cgATT----CT-A--CATG----C-A----
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         34386 24 +     78940 agatt--tgt----cgATT----TT-A--CATG----C-AA--A
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  121730 21 +    145789 A---T--TTT----GAATT----TT-A--CATA----C-AA--A
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  33669 20 +     62360 A---T--TTT----CAAT-----TT-A--CATA----C-AA--A
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7222151 21 -   7562323 a---t--tgt----gaatT----AT-A--CATG----T-AA--A
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              40606 21 -     66828 A---C--TGT----GAACT----TT-A--CATG----T-AA--A
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141872737 21 + 163896628 a---t--ggt----gAATT----TT-A--CTTG----T-CA--A
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      304571 21 -    505867 a---t--tgt----ataTT----TT-A--CTTG----T-AA--A
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       36085 21 +     38679 A---T--AGT----GAATT----TT-A--CATG----T-AA--A
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18005526 21 -  38779656 A---T--AGT----GAATT----TT-A--CGTG----T-AA--A
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134074803 20 - 275406953 ----t--tGT----TGATT----TT-A--CATG----C-AA--A
i Ovis_aries.CM001582.2                                 I 3 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      76017 20 +    140051 ----T--TGT----TGATT----TT-A--CATG----C-AA--A
i Ovis_canadensis.OviCan_scaffold_6251                  I 3 C 0
s Pan_paniscus.CM003386.1                               127571546 21 - 205426864 a---t--agt----gaaTT----TT-A--CATG----T-AT--G
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120148699 21 - 196562556 a---t--agt----gaaTT----TT-A--CATG----T-AT--G
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  31257 19 +    295523 -------TAC----GAATT----TT-A--CTTG----T-AA--A
i Panthera_onca.PanOnc_flattened_line_1615              I 1 C 0
s Panthera_pardus.KV860323.1                              3634858 19 +  18214204 -------tac----gAATT----TT-A--CTTG----T-AA--A
i Panthera_pardus.KV860323.1                            I 1 C 0
s Panthera_tigris.KE721879.1                              5024639 19 -   6340057 -------tac----gAATT----TT-A--CTTG----T-AA--A
i Panthera_tigris.KE721879.1                            I 1 C 0
s Pantholops_hodgsonii.KE114631.1                         1063661 20 -   1292953 ----t--tgt----tgatt----TT-A--CATG----C-AA--A
i Pantholops_hodgsonii.KE114631.1                       I 3 C 0
s Papio_anubis.CM001492.2                               188152644 15 - 188283584 A---T--AGt----gaatt----tt-a--ca-------------
i Papio_anubis.CM001492.2                               C 0 I 2
s Papio_cynocephalus.k141_386926                            48856 15 +     76494 A---T--AGT----GAATT----TT-A--CA-------------
i Papio_cynocephalus.k141_386926                        C 0 I 2
s Papio_hamadryas.Contig15                               47510041 15 +  47705337 A---T--AGT----GAATT----TT-A--CA-------------
i Papio_hamadryas.Contig15                              C 0 I 2
s Papio_kindae.k141_5458022                                 64023 15 -    104429 A---T--AGT----GAATT----TT-A--CA-------------
i Papio_kindae.k141_5458022                             C 0 I 2
s Papio_papio.k141_3561084                                  13809 15 -     29451 A---T--AGT----GAATT----TT-A--CA-------------
i Papio_papio.k141_3561084                              C 0 I 2
s Papio_ursinus.k141_3762866                                34212 15 +     35859 A---T--AGT----GAATT----TT-A--CA-------------
i Papio_ursinus.k141_3762866                            C 0 I 2
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    112587 19 -    135482 -------TGT----GAATT----TT-T--CTTG----T-AA--A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 I 1 C 0
s Perodicticus_ibeanus.k141_117958                           2131 21 -     23713 A---T--AGT----GAATT----TT-A--CATG----T-AA--A
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            21429 21 -     27972 A---T--AGT----GAATT----TT-A--CATG----T-AA--A
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      40037 19 -     45160 A---A--GGT----AAATT----CT-A--CATA----C-A----
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4946842 21 -   8017169 a---t--ttt----gaatT----TT-A--CATA----C-AA--A
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            118770 21 -    122454 A---T--TGT----GAATT----AT-A--CATG----T-AA--A
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           1898 21 -      3310 A---T--AGT----GAATT----TT-A--CATG----T-AT--G
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       21804 21 -     82327 A---T--AGT----GAATT----TT-A--CATG----T-AT--G
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           18556 21 +     19957 A---T--AGT----GAATT----TT-A--CATG----T-AT--G
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26736565 21 +  26888534 a---t--agt----gaatT----TT-A--CATG----T-AT--G
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            93689 23 +    112873 A---T--TGC----AAATT----TT-A--CATG----T-AAAAA
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             40541 21 -     61926 G---T--AGT----GAATT----TT-A--CATG----T-AC--A
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        21970 21 +     78826 G---T--AGT----GAATT----TT-A--CATG----T-AC--A
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              5921 21 -     15800 G---T--AGT----GAATT----TT-A--CATG----T-AC--A
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                         9119 21 -     16101 G---T--AGT----GAATT----TT-A--CATG----T-AC--A
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          2428 21 +      9673 G---T--AGT----GAATT----TT-A--CATG----T-AC--A
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13471422 21 -  19735023 G---T--AGT----GAATT----TT-A--CATG----T-AC--A
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           10330 21 -     31692 G---T--AGT----GAATT----TT-A--CATG----T-AC--A
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           2835 21 +     21690 A---T--TGT----GAATT----AT-A--CATG----T-AA--A
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       19737 21 +     44506 A---T--AGT----GAATT----TT-A--CATG----T-AC--A
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        19947 21 +     67491 A---C--AGT----GAATT----TT-A--CATG----T-AC--A
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      10192 21 -     98129 A---C--AGT----GAATT----TT-A--CATG----T-AC--A
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     19793 21 +    147771 A---T--AGT----GAATT----TT-A--CATG----T-AC--A
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        20043 21 -     23762 A---C--AGT----GAATT----TT-A--CATG----T-AC--A
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                           509 21 -     55515 A---C--AGT----GAATT----TT-A--CATG----T-AC--A
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         19862 21 +    152463 A---C--AGT----GAATT----TT-A--CATG----T-AC--A
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      6622 21 +      8943 A---C--AGT----GAATT----TT-A--CATG----T-AC--A
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                          9582 21 +    134592 A---C--AGT----GAATT----TT-A--CATG----T-AC--A
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          20172 21 -     75465 A---C--AGT----GAATT----TT-A--CATG----T-AC--A
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              184092 21 -    373494 a---t--agt----gaaTT----TT-A--CATG----C-AT--G
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19803999 21 +  19899266 A---T--AGT----GAATT----TT-A--CATG----C-AT--G
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               2136 21 -     15069 A---T--AGT----GAATT----TT-A--CATG----T-AT--G
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              2270 21 +     14865 A---T--AGT----GAATT----TT-A--CATG----T-AT--G
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                73444 15 +     78963 ---------------AATT----TT-A--CATG----T-CA--A
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6845479 17 +  12164890 ---------t----gaagt----tt-a--CATA----T-AA--A
i Prolemur_simus.MPIZ01000048.1                         C 0 I 1
s Propithecus_coquerelli.NW_012147863.1                     13939 21 -     30946 A---T--AGT----GAATT----TT-A--CATG----T-AA--A
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                          622 21 +     11805 A---T--AGT----GAATT----TT-G--CATG----T-AA--A
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           39958 21 +     52369 A---T--AGT----GAATT----TT-A--CATG----T-AA--A
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         32346 21 -     44753 A---T--AGT----GAATT----TT-A--CATG----T-AA--A
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            14267 21 +     27322 A---T--AGT----GAATT----TT-A--CATG----T-AA--A
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       13906 21 -     53241 A---T--AGT----GAATT----TT-G--CATG----T-AA--A
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         36178 21 -     48185 A---T--AGT----GAATT----TT-A--CATG----T-AA--A
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           30231 21 +     77221 G---T--TGT----GAATT----TT-A--TATG----C-AA--A
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            1374 22 -     27784 ----t--tgt----aaatt----tt-a--tgtg----t-aaaat
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        242928 21 -    344369 A---T--TGT----GAATT----TT-A--CTTG----T-AA--A
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13243501 23 -  17261082 A---TTGT------GAAGT----TT-A--CATG----T-AAAAA
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             601454 23 -   3946241 A---TTGt------gaatt----tt-a--catg----t-aaaaa
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131531221 19 - 161321710 -------tat----gaatT----TT-A--CTTG----T-AA--A
i Puma_concolor.QAVW01000427.1                          I 1 C 0
s Pygathrix_cinerea.k141_374971                             26261 21 +     56732 A---T--AGT----GAATT----TT-A--CATG----T-AT--G
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6802752 21 +   6970761 A---T--AGT----GAATT----TT-A--CATG----T-AT--G
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             2145 21 +     18040 A---T--AGT----GAATT----TT-A--CATG----T-AT--G
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                13308 22 +     68503 AGATT--TGT----TGATT----TT-A--CATG----C-A----
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13912277 21 +  90463843 A---T--TTT----GAATT----TT-A--CATG----C-AA--A
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1785124 23 +   2252614 A---T--TGT----GAATT----TT-A--CATG----G-AAAAT
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           12698 21 -     14454 A---T--AGT----GAATT----TT-A--CATG----T-AT--G
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206374024 21 - 206558726 a---t--agt----gaaTT----TT-A--CATG----T-AT--G
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44851672 21 -  45163003 A---T--AGT----GAATT----TT-A--CATG----T-AT--G
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                16803 23 +    109198 A---TTGT------GAATT----TT-A--CATG----T-AAAAA
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       5095 20 +     12214 ----T--TGT----CGATT----TT-A--CATG----C-AA--A
i Saiga_tatarica.SaiTat_scaffold_82192                  I 3 C 0
s Saimiri_boliviensis.NW_024100938.1                     15669654 21 -  43202129 c---t--agt----GAATT----TT-A--CATG----T-AC--A
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        1517 21 +     34089 C---T--AGT----GAATT----TT-A--CATG----T-AC--A
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              1458 21 -     60842 C---T--AGT----GAATT----TT-A--CATG----T-AC--A
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              1553 21 +     67014 C---T--AGT----GAATT----TT-A--CATG----T-AC--A
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              1531 21 +     60816 C---T--AGT----GAATT----TT-A--CATA----T-AC--A
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 1472 21 -     76454 C---T--AGT----GAATT----TT-A--CATG----T-AC--A
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17337982 21 -  30362882 A---T--AGT----GAATT----TT-A--CATG----T-AC--A
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         17581 21 -     62485 A---T--AGT----GAATT----TT-A--CATG----T-AC--A
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   28864 21 -    114521 A---T--TGT----GAATT----TT-A--TAAG----T-AA--A
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1527475                       24686 21 +     26421 A---T--AGT----GAATT----TT-A--CATG----T-AT--G
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       5146 21 +     20762 A---T--AGT----GAATT----TT-A--CATG----T-AT--G
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         38881 21 +     40653 A---T--AGT----GAATT----TT-A--CATG----T-AT--G
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                            9438 21 -     12194 A---T--AGT----GAATT----TT-A--CATG----T-AT--G
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     22860 21 -     27512 A---T--AGT----GAATT----TT-A--CATG----T-AT--G
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         31879 21 -     33692 A---T--AGT----GAATT----TT-A--CATG----T-AT--G
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   96462 21 -    120886 G---T--TTT----AAATT----TT-A--TATA----C-AA--A
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            15360 21 +    739146 A---T--TGT----AAATT----TT-A--CATA----T-AA--A
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17747739 18 -  27805282 -------tat----aaat-----tt-a--tacg----T-AA--T
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2237035 21 +   2842873 A---T--GGT----AAACA----TT-G--AATA----T-GA--A
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             231908 21 -    276980 A---T--TGT----GAATT----TT-A--CTTG----T-AA--A
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            24473 19 +     62062 -------TGT----AAACT----TT-A--CTTG----T-AA--G
i Suricata_suricatta.SurSur_flattened_line_20339        I 1 C 0
s Sus_scrofa.CM000824.4                                 189269373 21 + 218635234 A---T--TGA----GACTT----TT-A--CATA----T-AA--A
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                     13898852 21 +  13920577 A---T--AGT----GAATT----TT-A--CATG----T-AC--G
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               3319 23 -      6213 A---T--TAC----AGATT----TT-A--CATG----T-AAAAA
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               12245 21 +     45698 A---T--TGT----AATTT----TT-A--CATG----T-AA--A
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      804242 21 +   1148477 A---T--TGT----GAATT----TT-A--CGTG----T-AA--A
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  54903 21 +     99546 A---T--TGT----GAATT----TT-A--CATG----T-AA--A
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               23568 18 +     42269 --------GT----GAATT----TT-A--CATG----T-AA--A
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               56884 18 +     65473 --------GT----GAATT----TT-A--CATG----T-AA--A
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194004180 15 - 194193292 A---T--AGt----gaatt----tt-a--ca-------------
i Theropithecus_gelada.CM009951.1                       C 0 I 2
s Tolypeutes_matacus.TolMat_scaffold_269431                  1129 21 +      6782 A---T--TAC----AGATT----TT-A--CATT----T-AA--G
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  133381 23 -    259118 A---T--TGC----ACATT----CT-A--CATG----T-AAAAA
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        23256 21 +     38948 A---T--AGT----GAATT----TT-A--CATG----T-AT--G
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   16983 21 -     32910 A---T--AGT----GAATT----TT-A--CATG----T-AT--G
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       22881 21 +     24652 A---T--AGT----GAATT----TT-A--CATG----T-AT--G
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      1759 21 -      3559 A---T--AGT----GAATT----TT-A--CATG----T-AT--G
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           39705 21 -     54611 A---T--AGT----GAATT----TT-A--CATG----T-AT--G
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       15704 21 +     17312 A---T--AGT----GAATT----TT-A--CATG----T-AT--G
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    23067 21 -     25040 A---T--AGT----GAATT----TT-A--CATG----T-AT--G
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          1733 21 +      3528 A---T--AGT----GAATT----TT-A--CATG----T-AT--G
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  48095 21 +     51589 A---T--AGT----GAATT----TT-A--CATG----T-AT--G
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       11271 21 +     14732 A---T--AGT----GAATT----TT-A--CATG----T-AT--G
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       1748 21 -     28054 A---T--AGT----GAATT----TT-A--CATG----T-AT--G
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44656543 21 -  44834318 A---T--AGT----GAATT----TT-A--CATG----T-AT--G
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        1553 21 +      3372 A---T--AGT----GAATT----TT-A--CATG----T-AT--G
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   2725 16 +     90398 --------------GAATT----TG-A--CATG----T-AA--A
i Tragulus_javanicus.TraJav_scaffold_14717              I 5 C 0
s Trichechus_manatus.JH594618.1                          16078826 21 +  31416278 a---c--tgt----gaatt----tt-a--catg----t-aa--a
i Trichechus_manatus.JH594618.1                         C 0 I 1
s Tupaia_chinensis.KB320831.1                             2788683 18 -   3938065 -------agt----aaatt----tT-T--CAAG----T-AT---
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    1210 18 +     13056 -------TGT----AAATT----TT-A--CATG----T-AT---
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69310869 21 -  96451834 a---t--tgt----gaatT----AT-A--CATG----T-AA--A
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 24068 21 -     25548 A---T--TGT----GAATT----TT-A--CATG----T-AA--A
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6511487 21 +  28682327 a---t--tgt----gaATT----TT-A--CTTG----T-AA--A
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  2319 17 -     20643 ---------T----GAAGT----TT-A--CATA----T-AA--A
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             21863 17 -     33872 ---------T----GAAGT----TT-A--CATA----T-AA--A
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1522178 24 -   2331223 A---T--TGT----gaattttt-tt-a--catg----t-aa--a
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                134640 21 -    281493 A---T--TGT----ATATT----TT-A--CTTG----T-AA--A
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       124134 21 -    134049 A---T--GGT----GAACA----TT-A--GATG----T-AA--A
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        211167 21 -    227762 A---T--TGT----GAATT----TT-A--CTTG----T-AA--A
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     12350 19 -     20485 A---T--AAT----AAAAT----TT-A--CATG----T-A----
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           4371 21 -      8775 A---T--TGT----GAATT----AT-A--CATG----T-AA--A
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Bos_taurus.CM000177.6                                 136292828  0 - 158972876 C
e Bos_mutus.JH883513.1                                     569472  8 -    998990 I
e Bos_indicus.CM003021.1                                138137095  0 - 161108492 C
e Bison_bison.KN264915.1                                  6556860  0 +   6870073 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16291  1 -    119109 I
e Octodon_degus.JH651621.1                                3678743 1836 +  10294119 I
e Heterocephalus_glaber.JH602058.1                        2548028 229 +  31725842 I
e Fukomys_damarensis.KN123630.1                          13889876  0 -  19261668 C
e Dolichotis_patagonum.DolPat_scaffold_14102                33375  0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             56104 16 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                14631 16 +     26546 I
e Cavia_tschudii.CavTsc_scaffold_488                       173989  0 +    436027 C
e Cavia_porcellus.DS562889.1                             15795798  0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15783848 16 -  24422027 I

a score=0.000000
s hg38.chr4_GL000008v2_random                                8824 4 +    209709 G-AGT
s Acinonyx_jubatus.LLWD01000356.1                         2030900 4 +   3721120 T-ATT
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    109185 4 -    189883 G-AGT
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10654235 4 +  23371972 G-ACT
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7090955 4 -  16596857 g-ACT
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                    9920 4 -     22067 G-AGA
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_3103707                  59837 4 +     61638 G-AGT
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        51645 4 +     53391 G-AGT
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         2370 4 +     72529 G-AGT
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          1945 4 +      3797 G-AGT
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             7127 4 -     18050 G-AGA
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  8238 4 -     11521 G-AGA
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              7804 4 -     21359 G-AGA
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1856473                                6181 4 +      7227 G-AGA
i Alouatta_juara.k141_1856473                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          7095 4 -     10438 G-AGA
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            3751 4 +      7047 G-AGA
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             7037 4 +     10410 G-AGA
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                             840 4 -      4927 G-AGA
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             3768 4 +      6429 G-AGA
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3517655 4 +   4113121 G-ACT
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      387848 4 -    631301 G-ACT
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            28290 4 +     33004 G-ACT
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 59486 4 +     78111 G-AGA
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            2413 4 +     22701 G-AGA
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5746371 4 +   9889416 G-AGA
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             2956 4 -    104377 G-AGA
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               2964 4 +     23246 G-AGA
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     1007 4 +      5067 G-AGC
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      14956 4 +     17483 G-AGT
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 6241 4 -     29036 G-ACT
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9536228 4 +  39197703 G-AGA
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             57512 4 +     85812 G-AGA
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 8511 4 +     89302 G-AGA
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             13021 4 -     58268 G-AGA
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             61007 4 +    119057 G-AGA
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               2958 4 -     25888 G-AGA
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 3716 4 -     16375 G-TGT
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                                36 4 +      2719 G-TGT
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26377606 4 +  51448160 G-ACT
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        2837 4 -     13118 G-ACT
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   40756 4 -     72089 G-ACT
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bubalus_bubalis.KI419065.1                              1228488 4 -   1914593 G-ACT
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               110849 2 -    171031 G-A--
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                  9875 2 +    125063 G-A--
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                11923 2 -    216513 G-A--
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        4463 2 -    134917 G-A--
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3217124 4 -   8989139 g-aCT
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           394828 4 -  15254737 g-ACT
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2970562 4 +   6889770 g-aCT
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11515614 4 +  39901454 G-ACT
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   10632 4 +     87036 G-ACT
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11262275 4 -  35597290 G-ACT
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11084804 4 +  39895921 G-ACT
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16451828 4 -  44759192 G-ACT
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21322762 4 + 157394656 G-ACT
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135703989 4 - 157403528 G-ACT
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_647363                  1514 4 +      1887 A-AAA
i Capromys_pilorides.CapPil_scaffold_647363             I 27 C 0
s Carlito_syrichta.NW_007248099.1                          306105 4 +    345090 G-ACT
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               57033 4 +     67245 G-ATT
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   27522 2 +     33760 G---T
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   156326 4 -    276539 G-ACT
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18887699 4 -  29618158 G-AGA
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 5243 4 -     26817 G-AGA
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                 9486 4 +     25043 G-AGA
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         5142 4 +     21754 G-ACT
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4360824 4 +   7569818 G-ACT
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623          579 4 -      9338 G-ACT
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6551629 4 +   6739814 a-att
i Cercocebus_atys.KQ010443.1                            I 2 C 0
s Cercocebus_chrysogaster.k141_2951608                      53106 4 -     54931 A-ATT
i Cercocebus_chrysogaster.k141_2951608                  I 2 C 0
s Cercocebus_lunulatus.k141_3387186                         18090 4 -     19697 A-ATT
i Cercocebus_lunulatus.k141_3387186                     I 2 C 0
s Cercocebus_torquatus.k141_3969582                         55621 4 -    107033 A-ATT
i Cercocebus_torquatus.k141_3969582                     I 2 C 0
s Cercopithecus_ascanius.k141_3371259                        2066 4 -      3853 G-AGT
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          25999 4 +     30494 G-AGT
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           2023 4 -      4022 G-AGT
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          1916 4 -      3505 G-AGT
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           20720 4 +     35983 G-AGT
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11987242 4 +  12117833 G-AGT
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46473995 4 +  46592721 G-AGT
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      31822 4 +     33420 G-AGT
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        1858 4 -      3443 G-AGT
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      2849 4 -      4669 G-AGT
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        2649 4 -      4411 G-AGT
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         2174 4 -      4205 G-AGT
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_1070855           390 3 -      1715 G-AG-
i Chaetophractus_vellerosus.ChaVel_scaffold_1070855     C 0 C 0
s Cheirogaleus_major.k141_1157592                           56021 4 -     68416 G-AGT
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            5067 4 +     13308 G-AGT
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             2492 2 -     18223 G-A--
i Cheracebus_lucifer.k141_619653                        C 0 I 31
s Cheracebus_lugens.k141_203936                             19515 2 +     25473 G-A--
i Cheracebus_lugens.k141_203936                         C 0 I 31
s Cheracebus_regulus.k141_2128895                           38554 2 +     57117 G-A--
i Cheracebus_regulus.k141_2128895                       C 0 I 31
s Cheracebus_torquatus.k141_315545                          43229 2 +     54541 G-A--
i Cheracebus_torquatus.k141_315545                      C 0 I 31
s Chinchilla_lanigera.JH721867.1                         15958875 4 +  43084221 A-GTC
i Chinchilla_lanigera.JH721867.1                        I 9 C 0
s Chiropotes_israelita.k141_1189915                         68070 2 +    196370 G-A--
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          12251 2 +     40510 G-A--
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15135456 4 -  15256731 G-AGT
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      30502 4 -     53260 G-AGT
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101140951 4 + 101219884 G-AGT
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                14002 2 -     21363 ---GT
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           759308 2 +    964067 ---GT
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_141308              6102 3 -     12508 --AAT
i Chrysochloris_asiatica.ChrAsi_scaffold_141308         C 0 C 0
s Colobus_angolensis.KN985967.1                          10879530 4 +  10971483 G-AGT
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147660688 4 + 156195979 G-AGT
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            12675 4 +     23629 G-AGT
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60610289 4 +  78930452 G-AGT
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         36740 4 -     40477 T-ACT
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 274607 2 -    399297 ---CT
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53025806 4 +  72327488 G-AAT
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             17048 4 -     19186 G-AAT
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            48925 4 -     70449 G-ACT
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  205351 3 -    956709 G-CT-
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 27645 4 -     67205 a-aaa
i Ctenomys_sociabilis.CteSoc_scaffold_19489             I 100 C 0
s Dasypus_novemcinctus.JH568778.1                          179202 4 -   6883506 G-GGC
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16841888 4 +  31942871 G-AGT
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80034354 4 -  96802777 G-ACT
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18696345 4 -  18957592 g-acT
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 319487 4 +    993696 g-aCT
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_170113                  744 4 +       818 G-ACT
i Diceros_bicornis.DicBicMic_scaffold_170113            C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   154767 3 +    228994 --GTC
i Dinomys_branickii.DinBra_scaffold_1996                I 9 C 0
s Dipodomys_ordii.KN672545.1                              3652506 2 +   4240102 G---T
i Dipodomys_ordii.KN672545.1                            I 2 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 24060 2 +     28912 G---T
i Dipodomys_stephensi.DipSte_scaffold_44365             I 2 C 0
s Echinops_telfairi.JH980316.1                           22991595 4 -  44670279 G-GAT
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                  9727 4 +     24177 G-ACT
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1489016 4 +   1727528 G-ACT
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7803781 4 +  15467074 A-CCT
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        236272 4 -    369425 G-AAT
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           3281 4 -      7838 G-AAT
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85868687 3 +  99434291 G-AC-
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Equus_asinus.JREZ01000062.1                             5850205 4 -   7175178 G-ACT
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13348707 4 +  41866177 G-ACT
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          10197 4 +     92910 G-ACT
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11529793 4 +  16010500 T-AAT
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48767634 4 -  48907691 G-AGT
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          312492 4 +    330699 G-ACT
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             58922 4 +     89355 G-ACT
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              2068 4 +     13586 G-AGT
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               2003 4 -      6809 G-AGT
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             8476 4 +     36558 G-AGT
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             4791 5 +     60246 GTAGT
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 8280 4 +    109717 G-AGT
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               12653 5 +     16540 GTAGT
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                12930 4 +     27497 G-AGT
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           15392 4 +     26808 G-AGT
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                30120 4 +     46535 G-AGT
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              12843 4 -     29447 G-AGT
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129889877 4 - 159252932 T-ATT
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129276952 4 - 158578461 T-ATT
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 18086 4 +     52776 T-ATT
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Galago_moholi.ctg555                                     208015 4 -    847004 G-AGT
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           10396 4 -     43889 G-AGT
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           7467 4 +     27357 G-AGT
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               153343 4 +    324696 G-AGT
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    178537 4 -    189561 G-ACT
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                            9746 4 -     18683 G-AGT
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               2223 4 -     14630 G-AGT
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119649322 4 - 195582420 G-AGT
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   74295 4 +    118900 G-AGT
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                         2638 4 +      3980 G-AGT
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             25113 4 +     26611 G-AGT
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             2574 4 +     56096 G-AGT
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        25849 4 -     42470 G-AGT
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        42444 4 -     54384 G-AGT
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              14133 4 +     53719 G-ACT
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                25021 4 -     91191 G-ACT
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               53595 4 +     73687 A-AAT
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              144601 4 +    277961 G-ACT
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      276048 4 -    477199 G-ACT
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              5207 4 -      9143 G-ACT
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                       113 4 -   7690867 G-AGT
i Hoolock_leuconedys.ctg79                                 I 21 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 13200 4 -     67322 G-ATT
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hylobates_abbotti.k141_493872                              2040 4 +      5897 G-AGT
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_282275                               1252 4 +      1846 G-AGT
i Hylobates_agilis.k141_282275                          I 21 C 0
s Hylobates_klossii.k141_584463                               416 4 -      1009 G-AGT
i Hylobates_klossii.k141_584463                         I 21 C 0
s Hylobates_pileatus_b.ContigUN                                 14621585 4 -  25970782 G-AGT
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1133650                            1474 4 -      2775 G-AGT
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             30077 4 -     60944 G-AGT
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     3248 4 +     22540 G-GTC
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7123136 4 +  13083262 G-GGT
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_1884019                                    310 4 -      2196 G-AGT
i Indri_indri.k141_1884019                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               6280 4 +     17520 G-ACT
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8562640 4 +  11848649 N-NNN
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               21110 4 +     37189 G-ACT
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          47082 4 -    147782 G-AGA
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   111105 1 -    115756 G----
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 I 1
s Lemur_catta.scaffold_1                                258404122 4 - 285822530 G-AGT
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        21015 4 +     39228 G-AGT
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            50388 4 +     63517 G-AGT
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        75609 4 +    116806 G-AGT
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     28653 4 -     33031 G-AGT
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3082903 4 -   3498232 G-ACT
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    10109 4 +     22452 A-AGT
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            133452 4 +   3060487 G-ACT
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19244717 4 +  19376315 A-ATT
i Lophocebus_aterrimus.ctg55                            I 2 C 0
s Loris_lydekkerianus.k141_550999                            7767 4 +     84689 G-AGT
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3775518 4 +   6799190 G-AGT
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20588376 4 -  62548349 a-aat
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11084260 4 +  39895028 G-ACT
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             16404 4 +     74745 G-AGT
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12702910 4 +  12821369 G-AGT
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               5006 4 +      6569 G-AGT
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           43308 4 +     63263 G-AGT
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_1068107                               11884 4 +     12679 G-AGT
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                1457 4 +      3017 G-AGT
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  43069 4 -     79256 G-AGT
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196031987 4 + 196197964 G-AGT
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11442093 4 +  11645122 G-AGT
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   2016 4 -     46448 G-AGT
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                1847 4 -      3617 G-AGT
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 12179 4 -     55006 G-AGT
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43837216 4 +  43892939 G-AGT
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                4438 4 -      5978 G-AGT
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               2021 4 -     27140 G-AGT
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43433877 4 -  43563597 A-ATT
i Mandrillus_leucophaeus.scaffold125                    I 2 C 0
s Mandrillus_sphinx.Contig144                             4446703 4 -   4543643 A-ATT
i Mandrillus_sphinx.Contig144                           I 2 C 0
s Manis_javanica.JSZB01003966.1                            143637 4 +    252755 G-ACT
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             33711 4 +     58827 G-ACT
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36870980 4 +  64221397 G-GGT
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       61795 4 -    234502 G-ACT
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_1828            226180 3 -    226874 G-AC-
i Mellivora_capensis.MelCap_flattened_line_1828         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233                8724 4 +     15977 G-AAT
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1043530 4 -  26018355 T-GAT
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_183284                   1150 4 +      2166 G-ACT
i Mesoplodon_bidens.MesBid_scaffold_183284              C 0 C 0
s Microcebus_murinus.CM007691.1                          16507241 4 +  47401472 G-AGT
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  28542 4 -     48017 G-TAT
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               20193 4 -     32043 G-ACT
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22816418 4 -  98408828 G-AAT
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8206965 5 +  10048721 ggACT
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            31636 5 +     45743 GGACT
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        32536 4 +     34273 G-AGT
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         8207 4 -    104932 G-ACT
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     2646 4 +      8497 G-AGT
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 143878 4 +    154973 G-ACT
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                158731 4 +    265003 G-ACT
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 2122 4 -      4346 G-ACT
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  141828 4 -    168139 G-ACT
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          16618 1 -    100666 G----
i Murina_feae.MurFea_scaffold_2254                      C 0 I 1
s Mus_caroli.LT608236.1                                  70763155 4 +  92629107 T-TAT
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75486212 4 +  98207768 T-TAT
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67552373 4 +  89017189 T-TAT
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74327388 4 +  97876770 T-TAT
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              8249 4 +     98495 G-AAT
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4421070 3 -  28371801 G-AC-
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     87203 4 -    117718 A-AAA
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 20 C 0
s Myotis_brandtii.KE161952.1                               964945 1 +   8389877 G----
i Myotis_brandtii.KE161952.1                            C 0 I 1
s Myotis_davidii.KB114863.1                               5016627 1 +   6462685 G----
i Myotis_davidii.KB114863.1                             C 0 I 1
s Myotis_lucifugus.GL429887.1                             3462531 1 -   3747815 g----
i Myotis_lucifugus.GL429887.1                           C 0 I 1
s Myotis_myotis.MyoMyo_scaffold_6123                         7720 1 +     66751 G----
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 I 1
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             2592 4 -      8794 G-AGT
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            107597 4 +    362372 G-AAT
i Nannospalax_galili.KL201303.1                         I 39 I 219
s Nasalis_larvatus.k141_153429                               4919 4 +     48152 G-AGT
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4481806 4 -  14209539 G-ACT
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3948489 4 -   4490290 G-ACT
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  46851 4 +     94413 G-ACT
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1223136                          10708 4 -     11253 G-AGT
i Nomascus_annamensis.k141_1223136                      C 0 C 0
s Nomascus_concolor.k141_468488                              1351 4 -      1482 G-AGT
i Nomascus_concolor.k141_468488                         C 0 C 0
s Nomascus_gabriellae.k141_906566                            1340 4 -      2544 G-AGT
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             21814 4 -  18771707 G-AGT
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_844529                                  1089 4 +      2124 G-AGT
i Nomascus_siki_a.k141_844529                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                27253 4 +   3668941 G-ACT
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65564096 4 -  95554990 G-AGT
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                             941 4 +      6470 G-AGT
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65666465 4 +  89412551 G-AGT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4993084 4 -  23139505 A-AGG
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Odobenus_rosmarus.KB229369.1                             676463 4 -   3126709 G-ACT
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1077249 4 +   1425656 G-ACT
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         34410 4 +     78940 G-ACT
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  121751 4 +    145789 G-AAT
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  33689 4 +     62360 G-AAT
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7222172 4 -   7562323 G-ACT
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              40627 4 -     66828 A-AAT
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141872758 4 + 163896628 A-AGT
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      304592 4 -    505867 G-ACT
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       36106 4 +     38679 G-AGT
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18005547 4 -  38779656 G-AGT
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134074823 4 - 275406953 G-ACT
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      76037 4 +    140051 G-ACT
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127571567 4 - 205426864 G-AGT
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120148720 4 - 196562556 G-AGT
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  31276 4 +    295523 T-ATT
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3634877 4 +  18214204 T-ATT
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5024658 4 -   6340057 T-ATT
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1063681 4 -   1292953 G-ATT
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188152661 4 - 188283584 a-att
i Papio_anubis.CM001492.2                               I 2 C 0
s Papio_cynocephalus.k141_386926                            48873 4 +     76494 A-ATT
i Papio_cynocephalus.k141_386926                        I 2 C 0
s Papio_hamadryas.Contig15                               47510058 4 +  47705337 A-ATT
i Papio_hamadryas.Contig15                              I 2 C 0
s Papio_kindae.k141_5458022                                 64040 4 -    104429 A-ATT
i Papio_kindae.k141_5458022                             I 2 C 0
s Papio_papio.k141_3561084                                  13826 4 -     29451 A-ATT
i Papio_papio.k141_3561084                              I 2 C 0
s Papio_ursinus.k141_3762866                                34229 4 +     35859 A-ATT
i Papio_ursinus.k141_3762866                            I 2 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    112606 2 -    135482 G---T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           2152 4 -     23713 G-AGT
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            21450 4 -     27972 G-AGT
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      40056 2 -     45160 G---T
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4946863 4 -   8017169 G-AAT
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            118791 4 -    122454 G-ACT
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           1919 4 -      3310 G-AGT
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       21825 4 -     82327 G-AGT
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           18577 4 +     19957 G-AGT
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26736586 4 +  26888534 G-AGT
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            93712 1 +    112873 G----
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 I 1
s Pithecia_albicans.k141_991845                             40562 2 -     61926 G-A--
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        21991 2 +     78826 G-A--
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              5942 2 -     15800 G-A--
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                         9140 2 -     16101 G-A--
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          2449 2 +      9673 G-A--
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13471443 2 -  19735023 G-A--
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           10351 2 -     31692 G-A--
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           2856 4 +     21690 G-ACT
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       19758 2 +     44506 G-A--
i Plecturocebus_bernhardi.k141_959214                   C 0 I 30
s Plecturocebus_brunneus.k141_498086                        19968 2 +     67491 G-A--
i Plecturocebus_brunneus.k141_498086                    C 0 I 30
s Plecturocebus_caligatus.k141_2539816                      10213 2 -     98129 G-A--
i Plecturocebus_caligatus.k141_2539816                  C 0 I 30
s Plecturocebus_cinerascens.k141_744510                     19814 2 +    147771 G-A--
i Plecturocebus_cinerascens.k141_744510                 C 0 I 30
s Plecturocebus_cupreus.k141_1223294                        20064 2 -     23762 G-A--
i Plecturocebus_cupreus.k141_1223294                    C 0 I 30
s Plecturocebus_dubius.k141_3565563                           530 2 -     55515 G-A--
i Plecturocebus_dubius.k141_3565563                     C 0 I 30
s Plecturocebus_grovesi.k141_242819                         19883 2 +    152463 G-A--
i Plecturocebus_grovesi.k141_242819                     C 0 I 30
s Plecturocebus_hoffmannsi.k141_1595076                      6643 2 +      8943 G-A--
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 I 30
s Plecturocebus_miltoni.k141_841561                          9603 2 +    134592 G-A--
i Plecturocebus_miltoni.k141_841561                     C 0 I 30
s Plecturocebus_moloch.k141_890597                          20193 2 -     75465 G-A--
i Plecturocebus_moloch.k141_890597                      C 0 I 30
s Pongo_abelii.NDHI03003816.1                              184113 4 -    373494 G-AGT
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19804020 4 +  19899266 G-AGT
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               2157 4 -     15069 G-AGT
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              2291 4 +     14865 G-AGT
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                73459 4 +     78963 A-AAT
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6845497 4 +  12164890 G-AGT
i Prolemur_simus.MPIZ01000048.1                         I 1 C 0
s Propithecus_coquerelli.NW_012147863.1                     13960 4 -     30946 G-TGT
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                          643 4 +     11805 G-TGT
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           39979 4 +     52369 G-TGT
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         32367 4 -     44753 G-TGT
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            14288 4 +     27322 G-TGT
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       13927 4 -     53241 G-TGT
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         36199 4 -     48185 G-TGT
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           30252 4 +     77221 G-AAT
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            1396 4 -     27784 g-acT
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        242949 3 -    344369 G-AC-
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13243524 4 -  17261082 G-ACT
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             601477 4 -   3946241 g-aCT
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131531240 4 - 161321710 T-ATT
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             26282 4 +     56732 G-AGT
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6802773 4 +   6970761 G-AGT
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             2166 4 +     18040 G-AGT
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                13330 4 +     68503 G-ACT
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13912298 4 +  90463843 C-Tgt
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1785147 4 +   2252614 G-ACT
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           12719 4 -     14454 G-AGT
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206374045 4 - 206558726 G-AGT
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44851693 4 -  45163003 G-AGT
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                16826 4 +    109198 G-ACT
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       5115 4 +     12214 G-ACT
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15669675 4 -  43202129 G-AGA
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        1538 4 +     34089 G-AGA
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              1479 4 -     60842 G-AGA
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              1574 4 +     67014 G-AGA
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              1552 4 +     60816 G-AGA
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 1493 4 -     76454 G-AGA
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17338003 4 -  30362882 G-AGA
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         17602 4 -     62485 G-AGA
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   28885 4 -    114521 G-AGT
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1527475                       24707 4 +     26421 G-AGT
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       5167 4 +     20762 G-AGT
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         38902 4 +     40653 G-AGT
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                            9459 4 -     12194 G-AGT
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     22881 4 -     27512 G-AGT
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         31900 4 -     33692 G-AGT
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   96483 4 -    120886 G-AAT
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            15381 4 +    739146 G-AGT
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17747757 4 -  27805282 G-ATT
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2237056 4 +   2842873 G-GGT
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             231929 4 -    276980 G-ACT
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            24492 4 +     62062 G-ACT
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189269394 4 + 218635234 G-ACT
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                     13898873 4 +  13920577 G-AGT
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               3342 5 -      6213 GAACT
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               12266 4 +     45698 G-AGT
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      804263 4 +   1148477 G-ACT
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  54924 4 +     99546 G-ACT
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               23586 4 +     42269 G-ACT
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               56902 4 +     65473 G-ACT
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194004197 4 - 194193292 a-att
i Theropithecus_gelada.CM009951.1                       I 2 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  1150 3 +      6782 G-AG-
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  133404 4 -    259118 C-ACT
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        23277 4 +     38948 G-AGT
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   17004 4 -     32910 G-AGT
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       22902 4 +     24652 G-AGT
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      1780 4 -      3559 G-AGT
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           39726 4 -     54611 G-AGT
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       15725 4 +     17312 G-AGT
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    23088 4 -     25040 G-AGT
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          1754 4 +      3528 G-AGT
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  48116 4 +     51589 G-AGT
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       11292 4 +     14732 G-AGT
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       1769 4 -     28054 G-AGT
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44656564 4 -  44834318 G-AGT
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        1574 4 +      3372 G-AGT
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   2741 4 +     90398 G-ATT
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16078848 4 +  31416278 a-aat
i Trichechus_manatus.JH594618.1                         I 1 C 0
s Tupaia_chinensis.KB320831.1                             2788701 3 -   3938065 --ACT
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    1228 3 +     13056 --ACT
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69310890 4 -  96451834 G-ACT
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 24089 4 -     25548 G-AGT
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6511508 4 +  28682327 G-ACT
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  2336 4 -     20643 G-AGT
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             21880 4 -     33872 G-AGT
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1522202 4 -   2331223 g-ACT
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                134661 4 -    281493 G-ACT
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       124155 4 -    134049 G-GGT
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        211188 4 -    227762 G-ACT
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     12369 4 -     20485 G-AGT
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           4392 4 -      8775 G-ACT
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Bos_taurus.CM000177.6                                 136292828 0 - 158972876 C
e Bos_mutus.JH883513.1                                     569472 8 -    998990 I
e Bos_indicus.CM003021.1                                138137095 0 - 161108492 C
e Bison_bison.KN264915.1                                  6556860 0 +   6870073 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16291 1 -    119109 I
e Octodon_degus.JH651621.1                                3678743 1836 +  10294119 I
e Heterocephalus_glaber.JH602058.1                        2548028 229 +  31725842 I
e Fukomys_damarensis.KN123630.1                          13889876 0 -  19261668 C
e Dolichotis_patagonum.DolPat_scaffold_14102                33375 0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             56104 16 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                14631 16 +     26546 I
e Cavia_tschudii.CavTsc_scaffold_488                       173989 0 +    436027 C
e Cavia_porcellus.DS562889.1                             15795798 0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15783848 16 -  24422027 I

a score=0.000000
s hg38.chr4_GL000008v2_random                                8828 6 +    209709 CT--TCAT
s Acinonyx_jubatus.LLWD01000356.1                         2030904 6 +   3721120 CT--TCAT
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    109189 6 -    189883 CT--TCAT
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10654239 6 +  23371972 CT--CCAC
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7090959 6 -  16596857 CT--TCAC
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                    9924 6 -     22067 CT--TCAT
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_3103707                  59841 6 +     61638 CT--TCAT
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        51649 6 +     53391 CT--TCAT
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         2374 6 +     72529 CT--TCAT
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          1949 6 +      3797 CT--TCAT
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             7131 6 -     18050 CT--TCAT
i Alouatta_belzebul.k141_1818029                        C 0 I 7
s Alouatta_caraya.k141_5460                                  8242 6 -     11521 CT--TCAT
i Alouatta_caraya.k141_5460                             C 0 I 7
s Alouatta_discolor.k141_811576                              7808 6 -     21359 CT--TCAT
i Alouatta_discolor.k141_811576                         C 0 I 7
s Alouatta_juara.k141_1856473                                6185 6 +      7227 CT--TCAT
i Alouatta_juara.k141_1856473                           C 0 I 7
s Alouatta_macconnelli.k141_1331706                          7099 6 -     10438 CT--TCAT
i Alouatta_macconnelli.k141_1331706                     C 0 I 7
s Alouatta_nigerrima.k141_2718643                            3755 6 +      7047 CT--TCAT
i Alouatta_nigerrima.k141_2718643                       C 0 I 7
s Alouatta_palliata.k141_1316127                             7041 6 +     10410 CT--TCAT
i Alouatta_palliata.k141_1316127                        C 0 I 7
s Alouatta_puruensis.k141_1284840                             844 6 -      4927 CT--TCAT
i Alouatta_puruensis.k141_1284840                       C 0 I 7
s Alouatta_seniculus.k141_990213                             3772 6 +      6429 CT--TCAT
i Alouatta_seniculus.k141_990213                        C 0 I 7
s Ammotragus_lervia.NIVO01013474.1                        3517659 6 +   4113121 CT--TCAT
i Ammotragus_lervia.NIVO01013474.1                      C 0 I 1
s Anoura_caudifer.AnoCau_scaffold_422                      387852 6 -    631301 CT--TCAT
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            28294 3 +     33004 CC-----T
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 I 1
s Aotus_azarae.k141_3170768                                 59490 6 +     78111 CT--TCAT
i Aotus_azarae.k141_3170768                             C 0 I 7
s Aotus_griseimembra.k141_3275623                            2417 6 +     22701 CT--TCAT
i Aotus_griseimembra.k141_3275623                       C 0 I 7
s Aotus_nancymaae.KZ196176.1                              5746375 6 +   9889416 CT--TCAT
i Aotus_nancymaae.KZ196176.1                            C 0 I 7
s Aotus_trivirgatus.k141_1740727                             2960 6 -    104377 CT--TCAT
i Aotus_trivirgatus.k141_1740727                        C 0 I 7
s Aotus_vociferans.k141_718647                               2968 6 +     23246 CT--TCAT
i Aotus_vociferans.k141_718647                          C 0 I 6
s Aplodontia_rufa.AprRuf_scaffold_156013                     1011 6 +      5067 TT--ACTT
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 I 7
s Arctocebus_calabarensis.k141_1161114                      14960 6 +     17483 TT--TCAT
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 6245 6 -     29036 CC--TCGT
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9536232 6 +  39197703 CT--TCAT
i Ateles_geoffroyi_b.tarseq_2582                           C 0 I 7
s Ateles_belzebuth.k141_1348307                             57516 6 +     85812 CT--TCAT
i Ateles_belzebuth.k141_1348307                         C 0 I 7
s Ateles_chamek.k141_1072810                                 8515 6 +     89302 CT--TCAT
i Ateles_chamek.k141_1072810                            C 0 I 7
s Ateles_geoffroyi_a.k141_1300742                             13025 6 -     58268 CT--TCAT
i Ateles_geoffroyi_a.k141_1300742                         C 0 I 7
s Ateles_marginatus.k141_899112                             61011 6 +    119057 CT--TCAT
i Ateles_marginatus.k141_899112                         C 0 I 7
s Ateles_paniscus.k141_1631200                               2962 6 -     25888 CT--TCAT
i Ateles_paniscus.k141_1631200                          C 0 I 7
s Avahi_laniger.k141_2840928                                 3720 5 -     16375 C---TCAT
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                                40 5 +      2719 C---TCAT
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26377610 6 +  51448160 CA--TTAA
i Balaenoptera_acutorostrata.KI537095.1                 C 0 I 61
s Balaenoptera_bonaerensis.DF502048.1                        2841 6 -     13118 CA--TTAA
i Balaenoptera_bonaerensis.DF502048.1                   C 0 I 61
s Beatragus_hunteri.BeaHun_scaffold_21644                   40760 6 -     72089 CT--TCAT
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 I 1
s Bubalus_bubalis.KI419065.1                              1228492 6 -   1914593 CT--TCAT
i Bubalus_bubalis.KI419065.1                            C 0 I 1
s Cacajao_ayresi.k141_724503                               110851 6 -    171031 CT--TCAT
i Cacajao_ayresi.k141_724503                            C 0 I 7
s Cacajao_calvus.k141_96166                                  9877 6 +    125063 CT--TCAT
i Cacajao_calvus.k141_96166                             C 0 I 7
s Cacajao_hosomi.k141_303789                                11925 6 -    216513 CT--TCAT
i Cacajao_hosomi.k141_303789                            C 0 I 7
s Cacajao_melanocephalus.k141_1160263                        4465 6 -    134917 CT--TCAT
i Cacajao_melanocephalus.k141_1160263                   C 0 I 7
s Camelus_bactrianus.KN276303.1                           3217128 2 -   8989139 CA------
i Camelus_bactrianus.KN276303.1                         C 0 I 1
s Camelus_dromedarius.KN271192.1                           394832 2 -  15254737 CA------
i Camelus_dromedarius.KN271192.1                        C 0 I 1
s Camelus_ferus.KB016973.1                                2970566 2 +   6889770 CA------
i Camelus_ferus.KB016973.1                              C 0 I 1
s CanFam4.chr31                                          11515618 6 +  39901454 CT--CTAC
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   10636 6 +     87036 CT--CTAC
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11262279 6 -  35597290 CT--CTAC
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11084808 6 +  39895921 CT--CTAC
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16451832 6 -  44759192 CT--CTAC
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21322766 6 + 157394656 CT--TCAT
i Capra_aegagrus.CM003214.1                             C 0 I 1
s Capra_hircus.CM004562.1                               135703993 6 - 157403528 CT--TCAT
i Capra_hircus.CM004562.1                               C 0 I 1
s Capromys_pilorides.CapPil_scaffold_647363                  1518 6 +      1887 AG--TGTT
i Capromys_pilorides.CapPil_scaffold_647363             C 0 C 0
s Carlito_syrichta.NW_007248099.1                          306109 6 +    345090 CT--TCAT
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               57037 6 +     67245 CT--TCAT
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   27524 6 +     33760 CT--TCAT
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   156330 6 -    276539 CT--TCAT
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18887703 6 -  29618158 CT--TCAA
i Cebus_albifrons.Contig22                              C 0 I 7
s Cebus_olivaceus.k141_93739                                 5247 6 -     26817 CT--TCAA
i Cebus_olivaceus.k141_93739                            C 0 I 7
s Cebus_unicolor.k141_239009                                 9490 6 +     25043 CT--TCAA
i Cebus_unicolor.k141_239009                            C 0 I 7
s Cephalopachus_bancanus.k141_702587                         5146 6 +     21754 CT--TCAT
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4360828 6 +   7569818 CT--TCAT
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623          583 6 -      9338 CT--TCAT
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6551633 6 +   6739814 ct--tCAT
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      53110 6 -     54931 CT--TCAT
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         18094 6 -     19697 CT--TCAT
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         55625 6 -    107033 CT--TCAT
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        2070 6 -      3853 CT--TCAT
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          26003 6 +     30494 CT--TCAT
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           2027 6 -      4022 CT--TCAT
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          1920 6 -      3505 CT--TCAT
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_albogularis.ctg51                              11987246 6 +  12117833 CT--TCAT
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46473999 6 +  46592721 CT--TCAT
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      31826 6 +     33420 CT--TCAT
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        1862 6 -      3443 CT--TCAT
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      2853 6 -      4669 CT--TCAT
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        2653 6 -      4411 CT--TCAT
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         2178 6 -      4205 CT--TCAT
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_1070855           393 4 -      1715 ----TCAT
i Chaetophractus_vellerosus.ChaVel_scaffold_1070855     C 0 C 0
s Cheirogaleus_major.k141_1157592                           56025 6 -     68416 CT--TCAT
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            5071 6 +     13308 CT--TCAT
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             2525 6 -     18223 CT--TCAT
i Cheracebus_lucifer.k141_619653                        I 31 I 7
s Cheracebus_lugens.k141_203936                             19548 6 +     25473 CT--TCAT
i Cheracebus_lugens.k141_203936                         I 31 I 7
s Cheracebus_regulus.k141_2128895                           38587 6 +     57117 CT--TCAT
i Cheracebus_regulus.k141_2128895                       I 31 I 7
s Cheracebus_torquatus.k141_315545                          43262 6 +     54541 CT--TCAT
i Cheracebus_torquatus.k141_315545                      I 31 I 7
s Chinchilla_lanigera.JH721867.1                         15958879 6 +  43084221 CT--GCAT
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         68072 6 +    196370 CT--TCAT
i Chiropotes_israelita.k141_1189915                     C 0 I 7
s Chiropotes_sagulatus.k141_773804                          12253 6 +     40510 CT--TCAT
i Chiropotes_sagulatus.k141_773804                      C 0 I 7
s Chlorocebus_aethiops.ctg22                             15135460 6 -  15256731 CT--TCAT
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      30506 6 -     53260 CT--TCAT
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101140955 6 + 101219884 CT--TCAT
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                14004 6 -     21363 CT--TCAT
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           759310 6 +    964067 CT--TCAT
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_141308              6105 3 -     12508 TT--T---
i Chrysochloris_asiatica.ChrAsi_scaffold_141308         C 0 C 0
s Colobus_angolensis.KN985967.1                          10879534 6 +  10971483 CT--TCAT
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147660692 6 + 156195979 CT--TCAT
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            12679 6 +     23629 CT--TCAT
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60610293 6 +  78930452 AT--TCAT
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         36744 6 -     40477 CT--TCAT
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 274609 6 -    399297 CT--CCAT
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53025810 6 +  72327488 CT--TCAT
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             17052 6 -     19186 TA--TCAT
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            48929 6 -     70449 CT--TCAT
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  205354 6 -    956709 TT--TCAT
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 27649 8 -     67205 agtttaAT
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          179206 6 -   6883506 CT--TCAT
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16841892 6 +  31942871 TT--TCAT
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80034358 4 -  96802777 CA--TT--
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18696349 6 -  18957592 CT--TCAT
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 319491 4 +    993696 C----CAT
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_170113                  748 6 +       818 CT--TCAT
i Diceros_bicornis.DicBicMic_scaffold_170113            C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   154770 6 +    228994 CT--TCAT
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3652508 6 +   4240102 TT--TCAT
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 24062 6 +     28912 TT--TCAT
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Echinops_telfairi.JH980316.1                           22991599 3 -  44670279 CT--T---
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                  9731 2 +     24177 ------AT
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1489020 6 +   1727528 CT--TCAT
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 I 1
s Elephantulus_edwardii.JH947210.1                        7803785 3 +  15467074 CT--T---
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        236276 6 -    369425 CA--TCAT
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           3285 6 -      7838 TA--TCAT
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85868690 5 +  99434291 -T--TCAC
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Equus_asinus.JREZ01000062.1                             5850209 6 -   7175178 CT--TCAT
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13348711 6 +  41866177 CT--TCAT
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          10201 6 +     92910 CT--TCAT
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11529797 5 +  16010500 AT--TTA-
i Erinaceus_europaeus.JH835290.1                        C 0 I 1
s Erythrocebus_patas.Contig8                             48767638 6 -  48907691 CT--TCAT
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          312496 6 +    330699 CA--TTAA
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 I 61
s Eubalaena_japonica.EubJap_flattened_line_7756             58926 6 +     89355 CA--TTAA
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 I 61
s Eulemur_albifrons.k141_715837                              2072 6 +     13586 CT--TCAT
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               2007 6 -      6809 CT--TCAT
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             8480 6 +     36558 CT--TCAT
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             4796 6 +     60246 CT--TCAT
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 8284 6 +    109717 CT--TCAT
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               12658 6 +     16540 CT--TCAT
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                12934 6 +     27497 CT--TCAT
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           15396 6 +     26808 CT--TCAT
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                30124 6 +     46535 CT--TCAT
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              12847 6 -     29447 CT--TCAT
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129889881 6 - 159252932 CT--TCAT
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129276956 6 - 158578461 CT--TCAT
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 18090 6 +     52776 CT--TCAT
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Galago_moholi.ctg555                                     208019 6 -    847004 TT--TCAT
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           10400 6 -     43889 TT--TCAT
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           7471 6 +     27357 TT--TCAT
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               153347 6 +    324696 CA--TCAT
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    178541 6 -    189561 CT--TCAT
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 I 1
s Glis_glis.GliGli_scaffold_79770                            9750 6 -     18683 GC--TCAT
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               2227 6 -     14630 CT--TCAT
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119649326 6 - 195582420 CT--TCAT
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   74299 5 +    118900 AC--TCA-
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                         2642 6 +      3980 CT--TCAT
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             25117 6 +     26611 CT--TCAT
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             2578 6 +     56096 CT--TCAT
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        25853 6 -     42470 CT--TCAT
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        42448 6 -     54384 CT--TCAT
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              14137 6 +     53719 CC--TTAT
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                25025 6 -     91191 CT--TCAT
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 I 1
s Heterohyrax_brucei.HetBruBak_scaffold_25354               53599 6 +     73687 CT--TCAT
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              144605 6 +    277961 CT--TCAT
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      276052 6 -    477199 CT--TCAT
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              5211 6 -      9143 CT--TCAT
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                       117 6 -   7690867 CT--TCAT
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 13204 6 -     67322 CT--TCAT
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hylobates_abbotti.k141_493872                              2044 6 +      5897 CT--TCAT
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_282275                               1256 6 +      1846 CT--TCAT
i Hylobates_agilis.k141_282275                          C 0 C 0
s Hylobates_klossii.k141_584463                               420 6 -      1009 CT--TCAT
i Hylobates_klossii.k141_584463                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14621589 6 -  25970782 CT--TCAT
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1133650                            1478 6 -      2775 CT--TCAT
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             30081 6 -     60944 CT--TCAT
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     3252 6 +     22540 CT--TCAT
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7123140 6 +  13083262 TT--TCAT
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 I 7
s Indri_indri.k141_1884019                                    314 5 -      2196 C---TCAT
i Indri_indri.k141_1884019                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               6284 6 +     17520 CA--TTAA
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 I 61
s Jaculus_jaculus.JH725517.1                              8562644 6 +  11848649 NN--NNNN
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               21114 6 +     37189 CA--TTAA
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 I 61
s Lagothrix_lagothricha.k141_12968                          47086 6 -    147782 CT--TCAT
i Lagothrix_lagothricha.k141_12968                      C 0 I 7
s Lasiurus_borealis.LasBor_scaffold_5102                   111107 6 -    115756 CT--TCAT
i Lasiurus_borealis.LasBor_scaffold_5102                I 1 C 0
s Lemur_catta.scaffold_1                                258404126 6 - 285822530 CT--TCAT
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        21019 6 +     39228 CT--TCAT
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            50392 6 +     63517 CT--TCAT
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        75613 6 +    116806 CT--TCAT
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     28657 6 -     33031 CT--TCAT
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3082907 6 -   3498232 CT--TCAC
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    10113 6 +     22452 TT--TCAT
i Lepus_americanus.LepAme_scaffold_62849                C 0 I 9
s Lipotes_vexillifer.KE558548.1                            133456 6 +   3060487 CA--TTAA
i Lipotes_vexillifer.KE558548.1                         C 0 I 61
s Lophocebus_aterrimus.ctg55                             19244721 6 +  19376315 CT--TCAT
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            7771 6 +     84689 TT--TCAT
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3775522 6 +   6799190 TT--TCAT
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20588380 3 -  62548349 -----cAT
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11084264 6 +  39895028 CT--CCAC
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             16408 6 +     74745 CT--TCAT
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12702914 6 +  12821369 CT--TCAT
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               5010 6 +      6569 CT--TCAT
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           43312 6 +     63263 CT--TCAT
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_1068107                               11888 6 +     12679 CT--TCAT
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                1461 6 +      3017 CT--TCAT
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  43073 6 -     79256 CT--TCAT
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196031991 6 + 196197964 CT--TCAT
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11442097 6 +  11645122 CT--TCAT
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   2020 6 -     46448 CT--TCAT
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                1851 6 -      3617 CT--TCAT
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 12183 6 -     55006 CT--TCAT
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43837220 6 +  43892939 CT--TCAT
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                4442 6 -      5978 CT--TCAT
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               2025 6 -     27140 CT--TCAT
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43433881 6 -  43563597 CT--TCAT
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4446707 6 -   4543643 CT--TCAT
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            143641 6 +    252755 CT--TTAT
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             33715 6 +     58827 CT--TCAT
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36870984 6 +  64221397 TT--TCAT
i Marmota_marmota.CZRN01000005.1                        C 0 I 7
s Megaderma_lyra.MegLyr_scaffold_3562                       61799 5 -    234502 C---TCAT
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_1828            226183 5 -    226874 -T--TCAC
i Mellivora_capensis.MelCap_flattened_line_1828         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233                8728 6 +     15977 CT--TCAT
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 I 4
s Mesocricetus_auratus.KB708139.1                         1043534 6 -  26018355 CT--TCAT
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_183284                   1154 6 +      2166 CA--TTAA
i Mesoplodon_bidens.MesBid_scaffold_183284              C 0 I 61
s Microcebus_murinus.CM007691.1                          16507245 6 +  47401472 TT--TCAT
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  28546 3 -     48017 CT--T---
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               20197 6 -     32043 CT--TCAT
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22816422 6 -  98408828 GA--TCAT
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8206970 6 +  10048721 CT--TCAT
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            31641 6 +     45743 CT--TCAT
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        32540 6 +     34273 CT--TCAT
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         8211 6 -    104932 CT--TCAC
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     2650 6 +      8497 CT--TCAT
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 143882 6 +    154973 CA--TTAA
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 I 57
s Mormoops_blainvillei.MorMeg_scaffold_2952                158735 6 +    265003 CT--TCAT
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 2126 6 -      4346 CT--TCAT
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 I 1
s Mungos_mungo.MunMun_flattened_line_8729                  141832 6 -    168139 CC--TCAT
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          16620 6 -    100666 CT--TCAT
i Murina_feae.MurFea_scaffold_2254                      I 1 C 0
s Mus_caroli.LT608236.1                                  70763159 6 +  92629107 CA--TCAT
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75486216 6 +  98207768 CA--TCAT
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67552377 6 +  89017189 CA--TCAT
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74327392 6 +  97876770 CA--TCAT
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              8253 6 +     98495 AC--TCAT
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4421073 5 -  28371801 -T--TCAC
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     87207 6 -    117718 AG--TATT
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               964947 6 +   8389877 CT--TCAT
i Myotis_brandtii.KE161952.1                            I 1 C 0
s Myotis_davidii.KB114863.1                               5016629 6 +   6462685 CT--TCAT
i Myotis_davidii.KB114863.1                             I 1 C 0
s Myotis_lucifugus.GL429887.1                             3462533 6 -   3747815 CT--TCAT
i Myotis_lucifugus.GL429887.1                           I 1 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         7722 6 +     66751 CT--TCAT
i Myotis_myotis.MyoMyo_scaffold_6123                    I 1 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             2596 6 -      8794 CT--TCAT
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL204535.1                           2056969 6 +   2354432 CT--TCAT
i Nannospalax_galili.KL204535.1                         I 4 C 0
s Nasalis_larvatus.k141_153429                               4923 6 +     48152 CT--TCAT
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4481810 6 -  14209539 CT--TCAC
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3948493 6 -   4490290 CA--TTAA
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 I 57
s Noctilio_leporinus.NocLep_scaffold_12062                  46855 6 +     94413 CT--TTGT
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1223136                          10712 6 -     11253 CT--TCAT
i Nomascus_annamensis.k141_1223136                      C 0 C 0
s Nomascus_concolor.k141_468488                              1355 6 -      1482 CT--TCAT
i Nomascus_concolor.k141_468488                         C 0 C 0
s Nomascus_gabriellae.k141_906566                            1344 6 -      2544 CT--TCAT
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             21818 6 -  18771707 CT--TCAT
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_844529                                  1093 6 +      2124 CT--TCAT
i Nomascus_siki_a.k141_844529                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                27257 6 +   3668941 CT--CCAC
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65564100 6 -  95554990 TT--TCAT
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                             945 6 +      6470 TT--TCAT
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65666469 6 +  89412551 TT--TCAT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4993088 6 -  23139505 TT--TTAT
i Ochotona_princeps.JH802095.1                          C 0 I 9
s Odobenus_rosmarus.KB229369.1                             676467 6 -   3126709 CT--TCAC
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1077253 6 +   1425656 CT--TCAT
i Odocoileus_virginianus.KZ101650.1                     C 0 I 1
s Okapia_johnstoni.LVCL01S0017931.1                         34414 6 +     78940 CT--TCAT
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 I 1
s Ondatra_zibethicus.OndZib_scaffold_6821                  121755 6 +    145789 CA--TCAT
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  33693 6 +     62360 CT--TCTT
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7222176 6 -   7562323 CA--TTAA
i Orcinus_orca.KB316965.1                               C 0 I 61
s Orycteropus_afer.OryAfe_flattened_line_13509              40631 3 -     66828 AT--T---
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141872762 6 + 163896628 TT--TCAT
i Oryctolagus_cuniculus.CM000803.1                      C 0 I 9
s Otocyon_megalotis.JAEUCK010005121.1                      304596 6 -    505867 CT--CCAC
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       36110 6 +     38679 TT--TCAT
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18005551 6 -  38779656 TT--TCAT
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134074827 6 - 275406953 CT--TCAT
i Ovis_aries.CM001582.2                                 C 0 I 1
s Ovis_canadensis.OviCan_scaffold_6251                      76041 6 +    140051 CT--TCAT
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 I 1
s Pan_paniscus.CM003386.1                               127571571 6 - 205426864 CT--TCAT
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120148724 6 - 196562556 CT--TCAT
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  31280 6 +    295523 CT--TCAT
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3634881 6 +  18214204 CT--TCAT
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5024662 6 -   6340057 CT--TCAT
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1063685 6 -   1292953 CT--TCAT
i Pantholops_hodgsonii.KE114631.1                       C 0 I 1
s Papio_anubis.CM001492.2                               188152665 6 - 188283584 ct--tCAT
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            48877 6 +     76494 CT--TCAT
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47510062 6 +  47705337 CT--TCAT
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 64044 6 -    104429 CT--TCAT
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  13830 6 -     29451 CT--TCAT
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                34233 6 +     35859 CT--TCAT
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    112608 6 -    135482 TT--TCAG
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           2156 6 -     23713 TT--TCAT
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            21454 6 -     27972 TT--TCAT
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      40058 6 -     45160 CT--TCAT
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4946867 6 -   8017169 CT--TCTT
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            118795 6 -    122454 CA--TTAA
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 I 57
s Piliocolobus_badius.k141_1497351                           1923 6 -      3310 CT--TCAT
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       21829 6 -     82327 CT--TCAT
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           18581 6 +     19957 CT--TCAT
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26736590 6 +  26888534 CT--TCAT
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            93714 6 +    112873 CT--TCAT
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        I 1 C 0
s Pithecia_albicans.k141_991845                             40564 6 -     61926 CT--TCAT
i Pithecia_albicans.k141_991845                         C 0 I 7
s Pithecia_chrysocephala.k141_159118                        21993 6 +     78826 CT--TCAT
i Pithecia_chrysocephala.k141_159118                    C 0 I 7
s Pithecia_hirsuta.k141_1152968                              5944 6 -     15800 CT--TCAT
i Pithecia_hirsuta.k141_1152968                         C 0 I 7
s Pithecia_mittermeieri.k141_2119203                         9142 6 -     16101 CT--TCAT
i Pithecia_mittermeieri.k141_2119203                    C 0 I 7
s Pithecia_pissinattii.k141_1102319                          2451 6 +      9673 CT--TCAT
i Pithecia_pissinattii.k141_1102319                     C 0 I 7
s Pithecia_pithecia.tarseq_313                           13471445 6 -  19735023 CT--TCAT
i Pithecia_pithecia.tarseq_313                          C 0 I 7
s Pithecia_vanzolinii.k141_831006                           10353 6 -     31692 CT--TCAT
i Pithecia_vanzolinii.k141_831006                       C 0 I 7
s Platanista_gangetica.PlaMin_flattened_line_72990           2860 6 +     21690 CA--TTAA
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 I 61
s Plecturocebus_bernhardi.k141_959214                       19790 6 +     44506 CT--TCAT
i Plecturocebus_bernhardi.k141_959214                   I 30 I 7
s Plecturocebus_brunneus.k141_498086                        20000 6 +     67491 CT--TCAT
i Plecturocebus_brunneus.k141_498086                    I 30 I 7
s Plecturocebus_caligatus.k141_2539816                      10245 6 -     98129 CT--TCAT
i Plecturocebus_caligatus.k141_2539816                  I 30 I 7
s Plecturocebus_cinerascens.k141_744510                     19846 6 +    147771 CT--TCAT
i Plecturocebus_cinerascens.k141_744510                 I 30 I 7
s Plecturocebus_cupreus.k141_1223294                        20096 6 -     23762 CT--TCAT
i Plecturocebus_cupreus.k141_1223294                    I 30 I 7
s Plecturocebus_dubius.k141_3565563                           562 6 -     55515 CT--TCAT
i Plecturocebus_dubius.k141_3565563                     I 30 I 7
s Plecturocebus_grovesi.k141_242819                         19915 6 +    152463 CT--TCAT
i Plecturocebus_grovesi.k141_242819                     I 30 I 7
s Plecturocebus_hoffmannsi.k141_1595076                      6675 6 +      8943 CT--TCAT
i Plecturocebus_hoffmannsi.k141_1595076                 I 30 I 7
s Plecturocebus_miltoni.k141_841561                          9635 6 +    134592 CT--TCAT
i Plecturocebus_miltoni.k141_841561                     I 30 I 7
s Plecturocebus_moloch.k141_890597                          20225 6 -     75465 CT--TCAT
i Plecturocebus_moloch.k141_890597                      I 30 I 7
s Pongo_abelii.NDHI03003816.1                              184117 6 -    373494 CT--CCAT
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19804024 6 +  19899266 CT--CCAT
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               2161 6 -     15069 TT--TCAT
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              2295 6 +     14865 CT--TCAT
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                73463 6 +     78963 CT--TCAT
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6845501 6 +  12164890 CT--TCAT
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     13964 5 -     30946 C---TCAT
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                          647 5 +     11805 C---TCAT
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           39983 5 +     52369 C---TCAT
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         32371 5 -     44753 C---TCAT
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            14292 5 +     27322 C---TCAT
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       13931 5 -     53241 C---TCAT
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         36203 5 -     48185 C---TCAT
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           30256 6 +     77221 CT--TCAT
i Psammomys_obesus.NESX01026517.1                       C 0 I 4
s Pteronotus_parnellii.KE867983.1                            1400 6 -     27784 CT--TCAT
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        242952 5 -    344369 -T--TCAC
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13243528 2 -  17261082 ------AT
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             601481 2 -   3946241 ------AT
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131531244 6 - 161321710 CT--TCAT
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             26286 6 +     56732 CT--TCAT
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6802777 6 +   6970761 CT--TCAT
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             2170 6 +     18040 CT--TCAT
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                13334 6 +     68503 CT--TCAT
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 I 1
s Rattus_norvegicus.chr11                                13912302 6 +  90463843 ca--tcat
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1785151 6 +   2252614 TT--TCAT
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           12723 6 -     14454 CT--TCAT
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206374049 6 - 206558726 CT--TCAT
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44851697 6 -  45163003 CT--TCAT
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                16830 2 +    109198 ------AA
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       5119 6 +     12214 CT--TCAT
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 I 1
s Saimiri_boliviensis.NW_024100938.1                     15669679 6 -  43202129 CT--TCAT
i Saimiri_boliviensis.NW_024100938.1                    C 0 I 6
s Saimiri_cassiquiarensis.k141_808270                        1542 6 +     34089 CT--TCAT
i Saimiri_cassiquiarensis.k141_808270                   C 0 I 6
s Saimiri_macrodon.k141_2087127                              1483 6 -     60842 CT--TCAT
i Saimiri_macrodon.k141_2087127                         C 0 I 6
s Saimiri_oerstedii.k141_841116                              1578 6 +     67014 CT--TCAT
i Saimiri_oerstedii.k141_841116                         C 0 I 6
s Saimiri_sciureus.k141_1947592                              1556 6 +     60816 CT--TCAT
i Saimiri_sciureus.k141_1947592                         C 0 I 6
s Saimiri_ustus.k141_1282476                                 1497 6 -     76454 CT--TCAT
i Saimiri_ustus.k141_1282476                            C 0 I 6
s Sapajus_apella.ctg10                                   17338007 6 -  30362882 CT--TCAT
i Sapajus_apella.ctg10                                  C 0 I 7
s Sapajus_macrocephalus.k141_966464                         17606 6 -     62485 CT--TCAT
i Sapajus_macrocephalus.k141_966464                     C 0 I 7
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   28889 6 -    114521 AT--TCAT
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1527475                       24711 6 +     26421 CT--TCAT
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       5171 6 +     20762 CT--TCAT
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         38906 6 +     40653 CT--TCAT
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                            9463 6 -     12194 CT--TCAT
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     22885 6 -     27512 CT--TCAT
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         31904 6 -     33692 CT--TCAT
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   96487 6 -    120886 CT--TCAT
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            15385 6 +    739146 CT--TCAC
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 I 157
s Sorex_araneus.JH798170.1                               17747761 6 -  27805282 Aa--tcat
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2237060 6 +   2842873 TT--TCAT
i Spermophilus_dauricus.KZ294190.1                      C 0 I 7
s Spilogale_gracilis.SpiGra_flattened_line_905             231933 6 -    276980 CT--TCAC
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            24496 6 +     62062 CC--TCAT
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189269398 6 + 218635234 CT--TCAT
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                     13898877 6 +  13920577 CT--TCAT
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               3347 6 -      6213 CA--TCAT
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               12270 6 +     45698 CT--TCAT
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      804267 6 +   1148477 CT--TCAT
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  54928 6 +     99546 CT--TCAT
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               23590 6 +     42269 CT--TCAT
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               56906 6 +     65473 CT--TCAT
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194004201 6 - 194193292 ct--tCAT
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  1153 4 +      6782 ----TCAT
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  133408 6 -    259118 TT--TCAT
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        23281 6 +     38948 CT--TCAT
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   17008 6 -     32910 CT--TCAT
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       22906 6 +     24652 CT--TCAT
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      1784 6 -      3559 CT--TCAT
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           39730 6 -     54611 CT--TCAT
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       15729 6 +     17312 CT--TCAT
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    23092 6 -     25040 CT--TCAT
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          1758 6 +      3528 CT--TCAT
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  48120 6 +     51589 CT--TCAT
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       11296 6 +     14732 CT--TCAT
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       1773 6 -     28054 CT--TCAT
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44656568 6 -  44834318 CT--TCAT
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        1578 6 +      3372 CT--TCAT
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   2745 6 +     90398 CT--TCAT
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 I 1
s Trichechus_manatus.JH594618.1                          16078852 6 +  31416278 ct--TCAC
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2788704 6 -   3938065 CT--CCAT
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    1231 6 +     13056 CT--CCAT
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69310894 6 -  96451834 CA--TTAA
i Tursiops_truncatus.MRVK01000923.1                     C 0 I 61
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 24093 6 -     25548 AC--TCAT
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6511512 6 +  28682327 CT--CCAC
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  2340 6 -     20643 CT--TCAT
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             21884 6 -     33872 CT--TCAT
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1522206 2 -   2331223 CA------
i Vicugna_pacos.KN269600.1                              C 0 I 1
s Vulpes_lagopus.VulLag_flattened_line_2045                134665 6 -    281493 CT--CCAC
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       124159 6 -    134049 TT--TCAT
i Xerus_inauris.XerIna_scaffold_7898                    C 0 I 7
s Zalophus_californianus.ZalCal_flattened_line_4097        211192 6 -    227762 CT--TCAC
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     12373 6 -     20485 CG--TCGG
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           4396 6 -      8775 CA--TTAA
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 I 61
e Bos_taurus.CM000177.6                                 136292828 0 - 158972876 C
e Bos_mutus.JH883513.1                                     569472 8 -    998990 I
e Bos_indicus.CM003021.1                                138137095 0 - 161108492 C
e Bison_bison.KN264915.1                                  6556860 0 +   6870073 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16291 1 -    119109 I
e Octodon_degus.JH651621.1                                3678743 1836 +  10294119 I
e Heterocephalus_glaber.JH602058.1                        2548028 229 +  31725842 I
e Fukomys_damarensis.KN123630.1                          13889876 0 -  19261668 C
e Dolichotis_patagonum.DolPat_scaffold_14102                33375 0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             56104 16 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                14631 16 +     26546 I
e Cercopithecus_lowei.k141_623764                           20724 0 +     35983 C
e Cavia_tschudii.CavTsc_scaffold_488                       173989 0 +    436027 C
e Cavia_porcellus.DS562889.1                             15795798 0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15783848 16 -  24422027 I

a score=0.000000
s hg38.chr4_GL000008v2_random                                8834 24 +    209709 T---AATC-TGTAT-A-----AACTG-AC--AAG--TTT
s Acinonyx_jubatus.LLWD01000356.1                         2030910 24 +   3721120 T---AATT-CATAT-A-----ATTTC-AC--AAG--TTT
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    109195 24 -    189883 T---CAT-GCATAT-G-----AAGTA-AC----AAGTCT
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10654245 24 +  23371972 T---AATC-CTTAT-A-----ATGTG-AC--AAG--CTT
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7090965 24 -  16596857 T---AATC-CTCAT-A-----ATGTG-AC--AAG--CTT
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                    9930 22 -     22067 T---GGTC-TGTAT-A-----CATTT-AC----A--TAT
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_3103707                  59847 24 +     61638 T---AGTC-TGTAT-A-----AACTG-AC--AAG--TTT
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        51655 24 +     53391 T---AGTC-TGTAT-T-----AATTG-AC--AAG--TTT
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         2380 24 +     72529 T---AGTC-TGTAT-T-----AATTG-AC--AAG--TTT
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          1955 24 +      3797 T---AGTC-TGTAT-T-----AATTG-AC--AAG--TTT
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             7144 24 -     18050 T---AATC-TGTAT-A-----AACTG-AT--GAG--TTT
i Alouatta_belzebul.k141_1818029                        I 7 C 0
s Alouatta_caraya.k141_5460                                  8255 24 -     11521 T---AATC-TGCAT-A-----AACTG-AT--GAG--TTT
i Alouatta_caraya.k141_5460                             I 7 C 0
s Alouatta_discolor.k141_811576                              7821 24 -     21359 T---AATC-TGTAT-A-----AACTG-AT--GAG--TTT
i Alouatta_discolor.k141_811576                         I 7 C 0
s Alouatta_juara.k141_1856473                                6198 24 +      7227 T---AATC-TGTAT-A-----AACTG-AT--GAG--TTT
i Alouatta_juara.k141_1856473                           I 7 C 0
s Alouatta_macconnelli.k141_1331706                          7112 24 -     10438 T---AATC-TGTAT-A-----AACTG-AT--GAG--TTT
i Alouatta_macconnelli.k141_1331706                     I 7 C 0
s Alouatta_nigerrima.k141_2718643                            3768 24 +      7047 T---AATC-TGTAT-A-----AACTG-AT--GAG--TTT
i Alouatta_nigerrima.k141_2718643                       I 7 C 0
s Alouatta_palliata.k141_1316127                             7054 24 +     10410 T---AATC-TGTAT-A-----AACTG-AT--GAG--TTT
i Alouatta_palliata.k141_1316127                        I 7 C 0
s Alouatta_puruensis.k141_1284840                             857 24 -      4927 T---AATC-TGTAT-A-----AACTG-AT--GAG--TTT
i Alouatta_puruensis.k141_1284840                       I 7 C 0
s Alouatta_seniculus.k141_990213                             3785 24 +      6429 T---AATC-TGTAT-A-----AACTG-AT--GAG--TTT
i Alouatta_seniculus.k141_990213                        I 7 C 0
s Ammotragus_lervia.NIVO01013474.1                        3517666 24 +   4113121 A---ATCC-CATAC-A-----AATTG-AT--GAG--TTT
i Ammotragus_lervia.NIVO01013474.1                      I 1 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      387858 25 -    631301 T---AATC-CATAA-A---A-AATTG-AC--AAG--TTT
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            28298 11 +     33004 A---ATCC-TATAT-A-----------------------
i Antilocapra_americana.AntAmePen_scaffold_42841        I 1 C 0
s Aotus_azarae.k141_3170768                                 59503 24 +     78111 T---AATC-TGTAT-A-----AACTG-AT--GAG--TTT
i Aotus_azarae.k141_3170768                             I 7 C 0
s Aotus_griseimembra.k141_3275623                            2430 24 +     22701 T---AATC-TGTAT-A-----AACTG-AT--GAG--TTT
i Aotus_griseimembra.k141_3275623                       I 7 C 0
s Aotus_nancymaae.KZ196176.1                              5746388 24 +   9889416 T---AATC-TGTAT-A-----AACTG-AT--GAG--TTT
i Aotus_nancymaae.KZ196176.1                            I 7 C 0
s Aotus_trivirgatus.k141_1740727                             2973 24 -    104377 T---AATC-TGTAT-A-----AACTG-AT--GAG--TTT
i Aotus_trivirgatus.k141_1740727                        I 7 C 0
s Aotus_vociferans.k141_718647                               2980 23 +     23246 ----AATC-TGTAT-A-----AACTG-AT--GCG--TTT
i Aotus_vociferans.k141_718647                          I 6 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     1024 12 +      5067 ----------------------GTTC-ACAA--G--TTT
i Aplodontia_rufa.AprRuf_scaffold_156013                I 7 C 0
s Arctocebus_calabarensis.k141_1161114                      14966 24 +     17483 T---AATC-CATAT-A-----AACTG-AC--AAG--TTT
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 6251 24 -     29036 T---AATC-CATAT-A-----AATTG-AC--AAG--TTT
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9536245 24 +  39197703 T---AATC-TGTAT-A-----AACTG-AT--GAG--TTT
i Ateles_geoffroyi_b.tarseq_2582                           I 7 C 0
s Ateles_belzebuth.k141_1348307                             57529 24 +     85812 T---AATC-TGTAT-A-----AACTG-AT--GAG--TTT
i Ateles_belzebuth.k141_1348307                         I 7 C 0
s Ateles_chamek.k141_1072810                                 8528 24 +     89302 T---AATC-TGTAT-A-----AACTG-AT--GAG--TTT
i Ateles_chamek.k141_1072810                            I 7 C 0
s Ateles_geoffroyi_a.k141_1300742                             13038 24 -     58268 T---AATC-TGTAT-A-----AACTG-AT--GAG--TTT
i Ateles_geoffroyi_a.k141_1300742                         I 7 C 0
s Ateles_marginatus.k141_899112                             61024 24 +    119057 T---AATC-TGTAT-A-----AACTG-AT--GAG--TTT
i Ateles_marginatus.k141_899112                         I 7 C 0
s Ateles_paniscus.k141_1631200                               2975 24 -     25888 T---AATC-TGTAT-A-----AACTG-AT--GAG--TTT
i Ateles_paniscus.k141_1631200                          I 7 C 0
s Avahi_laniger.k141_2840928                                 3725 24 -     16375 T---AATC-CACAT-A-----AATTG-AC--AAA--TTT
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                                45 24 +      2719 T---AATC-CACAT-A-----AATTG-AC--AAA--TTT
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26377677 24 +  51448160 t---aatC-CATAT-A-----AATTG-AT--GAG--TTT
i Balaenoptera_acutorostrata.KI537095.1                 I 61 C 0
s Balaenoptera_bonaerensis.DF502048.1                        2908 24 -     13118 t---aatC-CCTAT-A-----AATTG-AT--GAG--TTT
i Balaenoptera_bonaerensis.DF502048.1                   I 61 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   40767 24 -     72089 A---ATCC-CATAC-A-----AACTG-AT--GAG--TTT
i Beatragus_hunteri.BeaHun_scaffold_21644               I 1 C 0
s Bubalus_bubalis.KI419065.1                              1228499 24 -   1914593 A---ATCC-CATAT-A-----AATTG-AT--AAG--TTT
i Bubalus_bubalis.KI419065.1                            I 1 C 0
s Cacajao_ayresi.k141_724503                               110864 24 -    171031 T---AATC-TGTAT-A-----AACTG-AG--GAG--TTT
i Cacajao_ayresi.k141_724503                            I 7 C 0
s Cacajao_calvus.k141_96166                                  9890 24 +    125063 T---AATC-TGTAT-A-----AACTG-AG--GAG--TTT
i Cacajao_calvus.k141_96166                             I 7 C 0
s Cacajao_hosomi.k141_303789                                11938 24 -    216513 T---AATC-TGTAT-A-----AACTG-AG--GAG--TTT
i Cacajao_hosomi.k141_303789                            I 7 C 0
s Cacajao_melanocephalus.k141_1160263                        4478 24 -    134917 T---AATC-TGTAT-A-----AACTG-AG--GAG--TTT
i Cacajao_melanocephalus.k141_1160263                   I 7 C 0
s Camelus_bactrianus.KN276303.1                           3217131 16 -   8989139 T---AATC-CATAT-A-----AATTG-------------
i Camelus_bactrianus.KN276303.1                         I 1 I 3
s Camelus_dromedarius.KN271192.1                           394835 16 -  15254737 T---AATC-CATAT-A-----AATTG-------------
i Camelus_dromedarius.KN271192.1                        I 1 I 3
s Camelus_ferus.KB016973.1                                2970569 16 +   6889770 T---AATC-CATAT-A-----AATTG-------------
i Camelus_ferus.KB016973.1                              I 1 I 3
s CanFam4.chr31                                          11515624 24 +  39901454 T---AATC-CATAT-A-----ACGTG-AC--AAG--TTT
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   10642 24 +     87036 T---AATC-CATAT-A-----AAGTG-AC--AAG--TTT
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11262285 24 -  35597290 T---AATC-CATAT-A-----ACGTG-AC--AAG--TTT
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11084814 24 +  39895921 T---AATC-CATAT-A-----ACGTG-AC--AAG--TTT
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16451838 24 -  44759192 T---AATC-CATAT-A-----ACGTG-AC--AAG--TTT
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21322773 24 + 157394656 A---ATCC-CATAC-A-----AATTG-AT--GGG--TTT
i Capra_aegagrus.CM003214.1                             I 1 C 0
s Capra_hircus.CM004562.1                               135704000 24 - 157403528 A---ATCC-CATAC-A-----AATTG-AT--GGG--TTT
i Capra_hircus.CM004562.1                               I 1 C 0
s Capromys_pilorides.CapPil_scaffold_647363                  1524 22 +      1887 T---AATT-CATAT-A-----AGTTT-AC----G--TTC
i Capromys_pilorides.CapPil_scaffold_647363             C 0 C 0
s Carlito_syrichta.NW_007248099.1                          306115 24 +    345090 T---TATC-TGTAC-A-----AATTG-AC--AAG--TTT
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               57043 24 +     67245 T---AATC-CATAT-A-----AATTG-AC--AAG--TTT
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   27530 25 +     33760 T---TATT-TATAT-A-----AACTTTACAA--G--TTT
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   156336 24 -    276539 G---AACC-CATAT-A-----AATTG-AC--AAG--TTT
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18887716 24 -  29618158 T---AATC-TGTAT-A-----AACTG-AC--GAG--TTT
i Cebus_albifrons.Contig22                              I 7 C 0
s Cebus_olivaceus.k141_93739                                 5260 24 -     26817 T---AATC-TGTAT-A-----AACTG-AC--GAG--TTT
i Cebus_olivaceus.k141_93739                            I 7 C 0
s Cebus_unicolor.k141_239009                                 9503 24 +     25043 T---AATC-TGTAT-A-----AACTG-AC--GAG--TTT
i Cebus_unicolor.k141_239009                            I 7 C 0
s Cephalopachus_bancanus.k141_702587                         5152 24 +     21754 T---TATC-TGTAC-A-----AATTG-AC--AAG--TTT
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4360834 24 +   7569818 T---AATC-TGTAT-A-----AATTG-AC--AAG--TTT
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623          589 24 -      9338 T---AATC-TGTAT-A-----AATTG-AC--AAG--TTT
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6551639 24 +   6739814 T---AGTC-TGTAT-A-----AACTG-AC--AAG--TTT
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      53116 24 -     54931 T---AGTC-TGTAT-A-----AACTG-AC--AAG--TTT
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         18100 24 -     19697 T---AGTC-TGTAT-A-----AACTG-AC--AAG--TTT
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         55631 24 -    107033 T---AGTC-TGTAT-A-----AACTG-AC--AAG--TTT
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        2076 24 -      3853 T---AGTC-TATAT-T-----AACTG-AC--AAG--TTT
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          26009 24 +     30494 T---AGTC-TATAT-T-----AACTG-AC--AAG--TTT
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           2033 24 -      4022 T---AGTC-TGTAT-T-----AACTG-AC--AAG--TTT
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          1926 24 -      3505 T---AGTC-TGTAT-A-----AACTG-AC--AAG--TTT
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           20724 16 +     35983 ------------AT-A-----AACTG-AC--AAG--TTT
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11987252 24 +  12117833 T---AGTC-TATAT-T-----AACTG-AC--AAG--TTT
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46474005 24 +  46592721 T---AGTC-TGTAT-A-----AACTG-AC--AAG--TTT
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      31832 24 +     33420 T---AGTC-TGTAT-T-----AACTG-AC--ACG--TTT
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        1868 24 -      3443 T---AGTC-TATAT-T-----AACTG-AC--AAG--TTT
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      2859 24 -      4669 T---AGTC-TGTAT-T-----AACTG-AC--ACG--TTT
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        2659 24 -      4411 T---AGTC-TGTAT-A-----AACTG-AC--AAG--TTT
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         2184 24 -      4205 T---AGTC-TGTAT-T-----AACTG-AC--AAG--TTT
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_1070855           397 25 -      1715 T---AATT-CATAT-A-----AATTAAAC--AAG--TTT
i Chaetophractus_vellerosus.ChaVel_scaffold_1070855     C 0 C 0
s Cheirogaleus_major.k141_1157592                           56031 24 -     68416 T---AATC-TATAT-A-----AATTG-AC--AAG--TTT
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            5077 24 +     13308 T---AATC-CATAT-A-----AATTG-AC--AAG--TTT
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             2538 24 -     18223 T---AATC-TGTAT-A-----AACTG-AG--GAG--TTT
i Cheracebus_lucifer.k141_619653                        I 7 C 0
s Cheracebus_lugens.k141_203936                             19561 24 +     25473 T---AATC-TGTAT-A-----AACTG-AG--GAG--TTT
i Cheracebus_lugens.k141_203936                         I 7 C 0
s Cheracebus_regulus.k141_2128895                           38600 24 +     57117 T---AATC-TGTAT-A-----AACTG-AG--GAG--TTT
i Cheracebus_regulus.k141_2128895                       I 7 C 0
s Cheracebus_torquatus.k141_315545                          43275 24 +     54541 T---AATC-TGTAT-A-----AACTG-AG--GAG--TTT
i Cheracebus_torquatus.k141_315545                      I 7 C 0
s Chinchilla_lanigera.JH721867.1                         15958885 22 +  43084221 T---AAtt-catat-a-----aattt-at----g--ttt
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         68085 24 +    196370 T---AATC-TGTAT-A-----AACTG-AG--GAG--TTT
i Chiropotes_israelita.k141_1189915                     I 7 C 0
s Chiropotes_sagulatus.k141_773804                          12266 24 +     40510 T---AATC-TGTAT-A-----AACTG-AG--GAG--TTT
i Chiropotes_sagulatus.k141_773804                      I 7 C 0
s Chlorocebus_aethiops.ctg22                             15135466 24 -  15256731 T---AGTC-TGTAT-T-----AATTG-AC--AAG--TTT
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      30512 24 -     53260 T---AGTC-TGTAT-T-----AATTG-AC--AAG--TTT
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101140961 24 + 101219884 T---AGTC-TGTAT-T-----AATTG-AC--AAG--TTT
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                14010 24 -     21363 T---AATC-CATAA-G-----AATTA-AC--TAA--TTG
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           759316 24 +    964067 T---AATC-CATAA-G-----AATTA-AC--TAA--TTG
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_141308              6108 27 -     12508 CATCAATT-TATGT-G-----AATTG-AC--AAG--TTT
i Chrysochloris_asiatica.ChrAsi_scaffold_141308         C 0 C 0
s Colobus_angolensis.KN985967.1                          10879540 24 +  10971483 T---AGTC-TGTAT-A-----AACTG-AC--AAG--TTT
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147660698 24 + 156195979 T---AGTC-TGTAT-A-----AACTG-AC--AAG--TTT
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            12685 24 +     23629 T---AGTC-TGTAT-A-----AACTG-AC--AAG--TTT
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60610299 24 +  78930452 C---AGTC-CATAT-A-----GATTA-TT--AAA--TTT
i Condylura_cristata.JH655880.1                         C 0 I 2
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         36750 24 -     40477 T---AATC-CACAG-A-----AACTG-AC--AAG--TTT
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 274615 24 -    399297 T---TATC-AATAT-A-----AAGTA-AC----AAGTTT
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53025816 24 +  72327488 T---CACC-CATAT-A-----aagta-ac----aaattt
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             17058 21 -     19186 A---AAT----AAA-A-----AATTG-AC--AAG--TTT
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            48935 24 -     70449 T---AATC-CATAT-G-----ATTTC-AC--AAG--TTT
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  205360 16 -    956709 A---ATTT-CGTGT-A-----AATTT-------------
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 27657 22 -     67205 T---AATT-CATAT-G-----AACTT-AT----G--TTC
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          179212 25 -   6883506 T---AATT-CATAT-A-----CTTCAAAC--AAG--CTT
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16841898 24 +  31942871 T---AATC-CATAT-A-----AATTG-AC--AAA--TTT
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80034362 23 -  96802777 ----AATC-CATAC-A-----AATTG-AT--GAG--TTT
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18696355 25 -  18957592 T---AATC-CATATTA-----AATTG-AC--AAG--TTT
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 319495 24 +    993696 T---AATC-TGCAT-A-----AATTG-GC--AAG--TTC
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_170113                  754 24 +       818 T---AATC-TGTAT-A-----AATTG-AC--AAG--CTT
i Diceros_bicornis.DicBicMic_scaffold_170113            C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   154776 22 +    228994 T---GATT-CACAT-A-----AATTT-AT----G--TTG
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3652514 23 +   4240102 T---AATC-CAT-C-C-----AACTT-CCAA--G--TTT
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 24068 24 +     28912 T---AATC-CATGC-C-----AACTT-CCAA--G--TTT
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Echinops_telfairi.JH980316.1                           22991602 26 -  44670279 TACCAATT-CATAT-A------ATTG-TC--AAA--TTT
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                  9733 24 +     24177 T---AATC-CATAT-A-----AATTG-AC--AAG--TTT
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1489027 24 +   1727528 A---ACCT-CATAT-A-----AATTG-AT--GAG--TTT
i Elaphurus_davidianus.JRFZ01086400.1                   I 1 C 0
s Elephantulus_edwardii.JH947210.1                        7803788 23 +  15467074 ----AATT-CTTGT-A-----AGTTA-CT--AAC--TTA
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        236282 24 -    369425 T---TATC-CATAT-A-----AAgta-ag----aaattt
i Ellobius_lutescens.LOEQ01003611.1                     C 0 I 167
s Ellobius_talpinus.LOJH01090055.1                           3291 24 -      7838 T---CATC-CATAC-A-----AAgta-ag----aaattt
i Ellobius_talpinus.LOJH01090055.1                      C 0 I 173
s Enhydra_lutris.KZ291749.1                              85868695 24 +  99434291 T---GATC-CTTAT-A-----ATGTG-AG--AAA--CTT
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Equus_asinus.JREZ01000062.1                             5850215 24 -   7175178 T---AATC-AGTAT-A-----AATTG-AC--AAG--TTC
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13348717 24 +  41866177 T---AATC-AGTAT-A-----AATTG-AC--AAG--TTC
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          10207 24 +     92910 T---AATC-AGTAT-A-----AATTG-AC--AAG--TTC
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11529803 24 +  16010500 T---AGTC-CATGC-A-----AACTG-AC--AAA--TTC
i Erinaceus_europaeus.JH835290.1                        I 1 C 0
s Erythrocebus_patas.Contig8                             48767644 24 -  48907691 T---AGTC-TGTAT-T-----AACTG-AC--AAG--TTT
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          312563 24 +    330699 T---AATC-CATAT-A-----AATTG-AT--GAG--TTT
i Eschrichtius_robustus.EscRob_flattened_line_685       I 61 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             58993 24 +     89355 T---AATC-CATAT-A-----AATTG-AT--GAG--TTT
i Eubalaena_japonica.EubJap_flattened_line_7756         I 61 C 0
s Eulemur_albifrons.k141_715837                              2078 24 +     13586 T---AATC-CATAT-A-----AATTG-AC--AAG--TTT
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               2013 24 -      6809 T---AATC-CATAT-A-----AATTG-AC--AAG--TTT
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             8486 24 +     36558 T---AATC-TATAT-A-----AATTG-AC--AAG--TTT
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             4802 24 +     60246 T---AATC-CATAT-A-----AATTG-AC--AAG--TTT
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 8290 24 +    109717 T---AATC-CATAT-A-----AATTG-AC--AAG--TTT
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               12664 24 +     16540 T---AATC-CATAT-A-----AATTG-AC--AAG--TTT
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                12940 24 +     27497 T---AATC-CATAT-A-----AATTG-AC--AAG--TTT
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           15402 24 +     26808 T---AATC-CATAT-A-----AATTG-AC--AAG--TTT
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                30130 24 +     46535 T---AATC-CATAT-A-----AATTG-AC--AAG--TTT
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              12853 24 -     29447 T---AATC-CATAT-A-----AATTC-AC--AAG--TTT
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129889887 24 - 159252932 T---AATC-CATAT-A-----ATTTC-AC--AAG--TTT
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129276962 24 - 158578461 T---AATC-CATAT-A-----ATTTC-AC--AAG--TTT
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 18096 24 +     52776 T---AATC-CATAT-A-----ATTTC-AC--AAG--TTT
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Galago_moholi.ctg555                                     208025 24 -    847004 T---AATC-CATAT-A-----CATTG-AC--ATG--TTT
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           10406 24 -     43889 T---AATC-CATAT-A-----CATTG-AC--ACG--TTT
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           7477 24 +     27357 T---AATC-CATAT-A-----AATCA-AC--AAG--TTT
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               153353 24 +    324696 T---AACC-CATAG-A-----AATTG-AC--AAG--TTT
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    178548 24 -    189561 A---ATCC-CATAT-A-----AATTG-AT--GAG--TTT
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 1 C 0
s Glis_glis.GliGli_scaffold_79770                            9756 24 -     18683 T---AATC-CACAT-A-----AATTT-ACAA--G--TTT
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               2233 24 -     14630 T---AATC-TGTAT-A-----AACTG-AC--AAG--TTT
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119649332 24 - 195582420 T---AATC-TGTAT-A-----AACTG-AC--AAG--TTT
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   74304 22 +    118900 -----ATC-TGTAT-A-----AATTT-ACAA--G--TTT
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                         2648 24 +      3980 T---AATC-CATAT-A-----AATTG-AC--AAG--TTT
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             25123 24 +     26611 T---AATC-CATAT-A-----AATTG-AC--AAG--TTT
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             2584 24 +     56096 T---AATC-CATAT-A-----AATTG-AC--AAG--TTT
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        25859 24 -     42470 T---AATC-CATAT-A-----AATTG-AC--AAG--TTT
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        42454 24 -     54384 T---AATC-CATAT-A-----AATTG-AC--AAG--TTT
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              14143 24 +     53719 T---AATC-CATAT-G-----ATTTC-AC--AAG--TTT
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                25032 24 -     91191 A---ATCC-CATAC-A-----AATTG-AT--GAG--TTT
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 1 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               53605 24 +     73687 C---AATT-CAAAT-A-----AATTA-AT--GAG--TTT
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              144611 24 +    277961 G---AATC-CATAT-A-----AATTG-AT--AAG--TTT
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      276058 24 -    477199 T---AATC-CATAT-A-----AACTG-AC--AAG--TTT
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              5217 24 -      9143 T---AATC-CATAT-T-----AACTG-AC--AAG--TTT
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                       123 24 -   7690867 T---AATC-TGTAT-A-----AACTG-AC--AAG--TTT
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 13210 24 -     67322 T---AATC-CATAT-G-----ATTTC-AC--AAG--TTT
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hylobates_abbotti.k141_493872                              2050 24 +      5897 T---AATC-TGTAT-A-----AACTG-AC--AAG--TTT
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_282275                               1262 24 +      1846 T---AATC-TGTAT-A-----AACTG-AC--AAG--TTT
i Hylobates_agilis.k141_282275                          C 0 C 0
s Hylobates_klossii.k141_584463                               426 24 -      1009 T---AATC-TGTAT-A-----AACTG-AC--AAG--TTT
i Hylobates_klossii.k141_584463                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14621595 24 -  25970782 T---AATC-TGTAT-A-----AACTG-AC--AAG--TTT
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1133650                            1484 24 -      2775 T---AATC-TGTAT-A-----AACTG-AC--AAG--TTT
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             30087 24 -     60944 T---AATC-TGTAT-A-----AACTG-AC--AAG--TTT
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     3258 22 +     22540 T---AATC-CATAT-A-----TATTT-AT----G--TTA
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7123153 12 +  13083262 ----------------------GTTC-ATAA--G--TTT
i Ictidomys_tridecemlineatus.JH393315.1                 I 7 C 0
s Indri_indri.k141_1884019                                    319 24 -      2196 T---AATC-CATAT-A-----AATTG-AC--AAG--TTT
i Indri_indri.k141_1884019                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               6351 24 +     17520 T---AATC-CATAT-A-----AATTG-AT--GGG--TTT
i Inia_geoffrensis.IniGeo_flattened_line_66725          I 61 C 0
s Jaculus_jaculus.JH725517.1                              8562650 22 +  11848649 N---tata-tatat-a-----tattt-ac----a--tat
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               21181 24 +     37189 T---AATC-CATAC-A-----AACTG-AT--GAG--CTT
i Kogia_breviceps.KogBre_flattened_line_35920           I 61 C 0
s Lagothrix_lagothricha.k141_12968                          47099 24 -    147782 T---AATC-TGTAT-A-----AACTG-AT--GAG--TTT
i Lagothrix_lagothricha.k141_12968                      I 7 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   111113 29 -    115756 C---AGTC-CATCA-ATTTATAATTG-AC--ATG--TTT
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258404132 24 - 285822530 T---AATC-CATAT-A-----AATTG-AC--AAG--TTT
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        21025 24 +     39228 T---AATC-CATAT-A-----AATTG-AC--AAG--TTT
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            50398 24 +     63517 T---AATC-CATAT-A-----AATTG-AC--AAG--TTT
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        75619 24 +    116806 T---AATC-CATAT-A-----AATTG-AC--AAG--TTT
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     28663 24 -     33031 T---AATC-CATAT-A-----AATTG-AC--AAG--TTT
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3082913 24 -   3498232 T---AATC-CTTAT-A-----ATGTG-AC--AAG--CTT
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    10128 13 +     22452 ---------------------CATTG-AC--AAG--TTT
i Lepus_americanus.LepAme_scaffold_62849                I 9 C 0
s Lipotes_vexillifer.KE558548.1                            133523 24 +   3060487 t---aatC-CATAT-A-----AATTG-AT--GAG--TTT
i Lipotes_vexillifer.KE558548.1                         I 61 C 0
s Lophocebus_aterrimus.ctg55                             19244727 24 +  19376315 T---AGTC-TGTAT-A-----AACTG-AC--AAG--TTT
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            7777 24 +     84689 C---AATC-CATAT-A-----CATTG-AC--AAG--TTT
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3775528 24 +   6799190 C---AATC-CATAT-A-----CATTG-AC--AAG--TTT
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20588383 24 -  62548349 T---AATT-CATAC-A-----AATTG-AC--AAG--TTT
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11084270 24 +  39895028 T---AATC-CATAT-A-----ACGTG-AC--AAG--TTT
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             16414 24 +     74745 T---AGTC-TGTAT-A-----AACTG-AC--AAG--TTT
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12702920 24 +  12821369 T---AGTC-TGTAT-A-----AACTG-AC--AAG--TTT
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               5016 24 +      6569 T---AGTC-TGTAT-A-----AACTG-AC--AAG--TTT
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           43318 24 +     63263 T---AGTC-TGTAT-A-----AACTG-AC--AAG--TTT
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_1068107                               11894 24 +     12679 T---AGTC-TGTAT-A-----AACTG-AC--AAG--TTT
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                1467 24 +      3017 T---AGTC-TGTAT-A-----AACTG-AC--AAG--TTT
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  43079 24 -     79256 T---AGTC-TGTAT-A-----AACTG-AC--AAG--TTT
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196031997 24 + 196197964 T---AGTC-TGTAT-A-----AACTG-AC--AAG--TTT
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11442103 24 +  11645122 T---AGTC-TGTAT-A-----AACTG-AC--AAG--TTT
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   2026 24 -     46448 T---AGTC-TGTAT-A-----AACTG-AC--AAG--TTT
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                1857 24 -      3617 T---AGTC-TGTAT-A-----AACTG-AC--AAG--TTT
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 12189 24 -     55006 T---AGTC-TGTAT-A-----AACTG-AC--AAG--TTT
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43837226 24 +  43892939 T---AGTC-TGTAT-A-----AACTG-AC--AAG--TTT
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                4448 24 -      5978 T---AGTC-TGTAT-A-----AACTG-AC--AAG--TTT
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               2031 24 -     27140 T---AGTC-TGTAT-A-----AACTG-AC--AAG--TTT
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43433887 24 -  43563597 T---AGTC-TGTAT-A-----AACTG-AC--AAG--TTT
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4446713 24 -   4543643 T---AGTC-TGTAT-A-----AACTG-AC--AAG--TTT
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            143647 24 +    252755 T---AGTC-CACAT-A-----AATTG-GC--AAG--TTT
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             33721 24 +     58827 T---AGTC-CACAT-A-----AATTG-GC--AAG--TTT
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36870997 12 +  64221397 ----------------------GTTC-ATAA--G--TTT
i Marmota_marmota.CZRN01000005.1                        I 7 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       61804 24 -    234502 T---AATT-CGTAT-G-----AACTG-AC--AAG--TTT
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_1828            226188 22 -    226874 T---AATC-CTTAT-A-----ATGTG-AG--AAA--C--
i Mellivora_capensis.MelCap_flattened_line_1828         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233                8738 13 +     15977 ---------------------TAGTA-AC----AAGTCT
i Meriones_unguiculatus.MerUng_scaffold_52233           I 4 C 0
s Mesocricetus_auratus.KB708139.1                         1043540 20 -  26018355 T---C-----ATGT-a-----aagta-ac----attttt
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_183284                   1221 24 +      2166 T---AATC-CATAT-A-----AATTG-AT--GAG--TTT
i Mesoplodon_bidens.MesBid_scaffold_183284              I 61 C 0
s Microcebus_murinus.CM007691.1                          16507251 24 +  47401472 T---AATC-CATAT-G-----AATTG-AC--AAG--TTT
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  28549 27 -     48017 TACCAATT-CCTAT-A-----AAATG-TC--AGA--TTT
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               20203 24 -     32043 T---AATC-CATAT-A-----AATTG-AC--AAG--TTT
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22816428 24 -  98408828 T---CATC-CATAT-A-----AAGTT-AG----AAATTT
i Microtus_ochrogaster.CM001673.1                       C 0 I 224
s Miniopterus_natalensis.LDJU01000022.1                   8206976 24 +  10048721 T---AATC-CATAT-A-----AATTG-AC--ATG--GTT
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            31647 24 +     45743 T---AATC-CATAT-A-----AATTG-AC--AAG--GTT
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        32546 24 +     34273 T---AGTC-TGTAT-A-----AACTG-AC--AAG--TTT
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         8217 24 -    104932 T---AATC-CCTAT-A-----ATGTG-AC--AAG--CTT
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     2656 24 +      8497 T---AATC-CATAT-A-----AATTG-AC--AAG--TTT
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 143945 24 +    154973 T---AATC-CATAT-A-----AATTG-AT--GAG--TTT
i Monodon_monoceros.MonMon_M_scaffold_5598              I 57 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                158741 24 +    265003 T---AATC-CATAT-A-----AATTG-AC--GAG--TTT
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 2133 24 -      4346 A---ATCC-CATAT-A-----AATTG-AT--GAG--TTT
i Moschus_moschiferus.MosMos_scaffold_146101            I 1 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  141838 24 -    168139 T---AATC-AATAT-G-----ATTTC-AC--AAG--TTT
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          16626 24 -    100666 C---AATC-CATAT-A-----AATTG-AC--AGG--TTT
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70763165 23 +  92629107 T---CAT--CATAT-A-----ATGTA-AC----AAGCTT
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75486222 23 +  98207768 T---CAT--CGTAT-A-----AAGTA-ac----aggctt
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67552383 23 +  89017189 T---CAC--CATAT-A-----AAGTA-AC----AAGCTT
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74327398 23 +  97876770 T---CAT--CGTAT-A-----AAGTA-AC----AAGCTT
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              8259 24 +     98495 T---AACA-CATAT-A-----AATTT-ACAA--G--TTT
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4421078 24 -  28371801 T---AATC-CTTAT-A-----ATGTG-AG--AAA--CTT
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     87213 22 -    117718 T---AATT-CATAT-A-----AGTTT-AT----G--TTC
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               964953 24 +   8389877 C---AATC-CATAT-A-----AATTG-AC--AGG--TTT
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5016635 24 +   6462685 C---AATC-CATAT-A-----AATTG-AC--AGG--TTT
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3462539 24 -   3747815 C---AATC-CATAT-A-----AATTG-AC--AGG--TTT
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         7728 24 +     66751 C---AATC-CATAT-A-----AATTG-AC--AGG--TTT
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             2602 24 -      8794 T---AATC-CATAT-G-----AATTA-TC--TAA--TTT
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL204535.1                           2056975 24 +   2354432 T---AATC-AATAT-A-----AACTT-AC----AAGTTT
i Nannospalax_galili.KL204535.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               4929 24 +     48152 T---AGTC-TGTAT-A-----AACTG-AC--AAG--TTT
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4481816 24 -  14209539 T---AATC-CTTAT-A-----ATGTG-AC--AAG--CTT
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3948556 24 -   4490290 T---AATC-CATAT-A-----AATTG-AT--GAG--TTT
i Neophocaena_asiaeorientalis.KZ688543.1                I 57 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  46861 17 +     94413 T---AATC-CATAT-A-----AATTG-A-----------
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 I 1
s Nomascus_annamensis.k141_1223136                          10718 24 -     11253 T---AATC-TGTAT-A-----AACTG-AC--AAG--TTT
i Nomascus_annamensis.k141_1223136                      C 0 C 0
s Nomascus_concolor.k141_468488                              1361 24 -      1482 T---AATC-TGTAT-A-----AACTG-AC--AAG--TTT
i Nomascus_concolor.k141_468488                         C 0 C 0
s Nomascus_gabriellae.k141_906566                            1350 24 -      2544 T---AATC-TGTAT-A-----AACTG-AC--AAG--TTT
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             21824 24 -  18771707 T---AATC-TGTAT-A-----AACTG-AC--AAG--TTT
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_844529                                  1099 24 +      2124 T---AATC-TGTAT-A-----AACTG-AC--AAG--TTT
i Nomascus_siki_a.k141_844529                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                27263 24 +   3668941 T---AATC-CATAT-A-----ACGTG-AC--AAG--TTT
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65564106 24 -  95554990 C---AATC-CATAT-A-----CATTG-AC--AAG--TTT
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                             951 24 +      6470 C---AATC-CATAT-A-----CATTG-AC--AAG--TTT
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65666475 24 +  89412551 C---AATC-CATAT-A-----CATTG-AC--AAG--TTT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4993103 13 -  23139505 ---------------------CACTG-AC--AAC--TTT
i Ochotona_princeps.JH802095.1                          I 9 C 0
s Odobenus_rosmarus.KB229369.1                             676473 24 -   3126709 T---AATC-CTTAC-A-----ATGTG-AC--AAG--CTT
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1077260 24 +   1425656 A---ACCT-CATAT-A-----AATTG-AT--CAG--TTT
i Odocoileus_virginianus.KZ101650.1                     I 1 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         34421 24 +     78940 A---ATCC-CATAT-A-----AATTG-AT--GAG--TTT
i Okapia_johnstoni.LVCL01S0017931.1                     I 1 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  121761 24 +    145789 T---CATC-CATAT-A-----AAGTA-AG----ACATTT
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 I 175
s Onychomys_torridus.OnyTor_scaffold_12578                  33699 24 +     62360 T---CACC-CATAT-A-----AAGTA-AC----AAATTT
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7222243 24 -   7562323 t---aatC-CATAT-A-----AATTG-AT--GAG--TTT
i Orcinus_orca.KB316965.1                               I 61 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              40634 24 -     66828 C---AAGT-CATGT-A-----AATTG-TC--AAG--TTT
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141872777 13 + 163896628 ---------------------CATTG-AC--AAC--TTT
i Oryctolagus_cuniculus.CM000803.1                      I 9 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      304602 24 -    505867 T---AATC-CATAT-A-----ACATG-AC--AAG--TTT
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       36116 24 +     38679 T---AATC-CATAT-A-----CATTG-AC--AAG--TTT
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18005557 24 -  38779656 T---AATC-CATAT-A-----CATTG-AC--AAG--TTT
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134074834 24 - 275406953 A---ATCC-CATAC-A-----AATTG-AT--GAG--TTT
i Ovis_aries.CM001582.2                                 I 1 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      76048 24 +    140051 A---ATCC-CATAC-A-----AATTG-AT--GAG--TTT
i Ovis_canadensis.OviCan_scaffold_6251                  I 1 C 0
s Pan_paniscus.CM003386.1                               127571577 24 - 205426864 T---AATC-TGTAT-A-----AACTG-AC--AAG--TTT
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120148730 24 - 196562556 T---AATC-TGTAT-A-----AACTG-AC--AAG--TTT
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  31286 24 +    295523 T---AATC-CATAT-A-----ATTTC-AC--AAG--TTT
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3634887 24 +  18214204 T---AATC-CATAT-A-----ATTTC-AC--AAG--TTT
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5024668 24 -   6340057 T---AATC-CATAT-A-----ATTTC-AC--AAG--TTT
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1063692 24 -   1292953 A---ATCC-CGTAC-A-----CATTG-AT--GAG--TTT
i Pantholops_hodgsonii.KE114631.1                       I 1 C 0
s Papio_anubis.CM001492.2                               188152671 24 - 188283584 T---AGTC-TGTAT-A-----AACTG-AC--AAG--TTT
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            48883 24 +     76494 T---AGTC-TGTAT-A-----AACTG-AC--AAG--TTT
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47510068 24 +  47705337 T---AGTC-TGTAT-A-----AACTG-AC--AAG--TTT
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 64050 24 -    104429 T---AGTC-TGTAT-A-----AACTG-AC--AAG--TTT
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  13836 24 -     29451 T---AGTC-TGTAT-A-----AACTG-AC--AAG--TTT
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                34239 24 +     35859 T---AGTC-TGTAT-A-----AACTG-AC--AAG--TTT
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    112614 24 -    135482 C---AATC-CATAT-A-----ATTTC-AC--AAG--TTT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           2162 24 -     23713 T---AATC-CATAT-A-----AATTG-AC--AAG--TTT
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            21460 24 -     27972 T---AATC-CATAT-A-----AATTG-AC--AAG--TTT
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      40064 24 -     45160 T---AATC-CATAC-C-----AATTT-CCAA--G--TTT
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4946873 24 -   8017169 T---CACC-CATAT-A-----AAGTA-AC----AAATTT
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            118858 24 -    122454 T---AATC-CATAT-A-----AATTG-AT--GAG--TTT
i Phocoena_phocoena.PhoPho_flattened_line_11948         I 57 C 0
s Piliocolobus_badius.k141_1497351                           1929 24 -      3310 T---AGTC-TGTAT-A-----AACTG-AC--AAG--TTT
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       21835 24 -     82327 T---AGTC-TGTAT-A-----AACTG-AC--AAG--TTT
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           18587 24 +     19957 T---AGTC-TGTAT-A-----AACTG-AC--AAG--TTT
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26736596 24 +  26888534 T---AGTC-TGTAT-A-----AACTG-AC--AAG--TTT
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            93720 30 +    112873 C---AGTC-CCTCA-ATTTATAATTG-AC-GAGG--TTT
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             40577 24 -     61926 T---AATC-TGTAT-A-----AACTG-AG--GCG--TTT
i Pithecia_albicans.k141_991845                         I 7 C 0
s Pithecia_chrysocephala.k141_159118                        22006 24 +     78826 T---AATC-TGTAT-A-----AACTG-AG--GAG--TTT
i Pithecia_chrysocephala.k141_159118                    I 7 C 0
s Pithecia_hirsuta.k141_1152968                              5957 24 -     15800 T---AATC-TGTAT-A-----AACTG-AG--GAG--TTT
i Pithecia_hirsuta.k141_1152968                         I 7 C 0
s Pithecia_mittermeieri.k141_2119203                         9155 24 -     16101 T---AATC-TGTAT-A-----AACTG-AG--GAG--TTT
i Pithecia_mittermeieri.k141_2119203                    I 7 C 0
s Pithecia_pissinattii.k141_1102319                          2464 24 +      9673 T---AATC-TGTAT-A-----AACTG-AG--GAG--TTT
i Pithecia_pissinattii.k141_1102319                     I 7 C 0
s Pithecia_pithecia.tarseq_313                           13471458 24 -  19735023 T---AATC-TGTAT-A-----AACTG-AG--GAG--TTT
i Pithecia_pithecia.tarseq_313                          I 7 C 0
s Pithecia_vanzolinii.k141_831006                           10366 24 -     31692 T---AATC-AGTAT-A-----AACTG-AG--GCA--TTT
i Pithecia_vanzolinii.k141_831006                       I 7 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           2927 24 +     21690 T---AATC-CATAT-A-----CATTG-AT--GAG--TTT
i Platanista_gangetica.PlaMin_flattened_line_72990      I 61 C 0
s Plecturocebus_bernhardi.k141_959214                       19803 24 +     44506 T---AATC-TGTAT-A-----AACTG-AG--GAG--TTT
i Plecturocebus_bernhardi.k141_959214                   I 7 C 0
s Plecturocebus_brunneus.k141_498086                        20013 24 +     67491 T---AATC-TGTAT-A-----AACTG-AG--GAG--TTT
i Plecturocebus_brunneus.k141_498086                    I 7 C 0
s Plecturocebus_caligatus.k141_2539816                      10258 24 -     98129 T---AATC-TGTAT-A-----AACTG-AG--GAG--TTT
i Plecturocebus_caligatus.k141_2539816                  I 7 C 0
s Plecturocebus_cinerascens.k141_744510                     19859 24 +    147771 T---AATC-TGTAT-A-----AACTG-AG--GAG--TTT
i Plecturocebus_cinerascens.k141_744510                 I 7 C 0
s Plecturocebus_cupreus.k141_1223294                        20109 24 -     23762 T---AATC-TGTAT-A-----AACTG-AG--GAG--TTT
i Plecturocebus_cupreus.k141_1223294                    I 7 C 0
s Plecturocebus_dubius.k141_3565563                           575 24 -     55515 T---AATC-TGTAT-A-----AACTG-AG--GAG--TTT
i Plecturocebus_dubius.k141_3565563                     I 7 C 0
s Plecturocebus_grovesi.k141_242819                         19928 24 +    152463 T---AATC-TGTAT-A-----AACTG-AG--GAG--TTT
i Plecturocebus_grovesi.k141_242819                     I 7 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      6688 24 +      8943 T---AATC-TGTAT-A-----AACTG-AG--GAG--TTT
i Plecturocebus_hoffmannsi.k141_1595076                 I 7 C 0
s Plecturocebus_miltoni.k141_841561                          9648 24 +    134592 T---AATC-TGTAT-A-----AACTG-AG--GAG--TTT
i Plecturocebus_miltoni.k141_841561                     I 7 C 0
s Plecturocebus_moloch.k141_890597                          20238 24 -     75465 T---AATC-TGTAT-A-----AACTG-AG--GAG--TTT
i Plecturocebus_moloch.k141_890597                      I 7 C 0
s Pongo_abelii.NDHI03003816.1                              184123 24 -    373494 T---AATC-TGTAT-A-----AACTG-AC--AAG--TTC
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19804030 24 +  19899266 T---AATC-TGTAT-A-----AACTG-AC--AAG--TTC
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               2167 24 -     15069 T---AGTC-TGTAT-A-----AACTG-AC--AAG--TTT
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              2301 24 +     14865 T---AGTC-TGTAT-A-----AACTG-AC--AAG--TTT
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                73469 24 +     78963 C---AATT-CAAAT-A-----AATTA-AT--GAG--TTT
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6845507 24 +  12164890 T---AATC-CATAT-A-----AATTG-AC--AAG--TTT
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     13969 24 -     30946 T---AATC-CATAT-A-----AATTG-AC--AAA--TTT
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                          652 24 +     11805 T---AATC-CATAT-A-----AATTG-AC--AAC--TTT
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           39988 24 +     52369 T---AATC-CATAT-A-----AATTG-AT--AAA--TTT
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         32376 24 -     44753 T---AATC-CATAT-A-----AATTG-AT--AAA--TTT
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            14297 24 +     27322 T---AATC-CATAT-A-----AATTG-AT--AAA--TTT
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       13936 24 -     53241 T---AATC-CATAT-A-----AATTG-AC--AAA--TTT
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         36208 24 -     48185 T---AATC-CATAT-A-----AATTG-AC--AAA--TTT
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           30266 13 +     77221 ---------------------TAGTA-AC----AAGTCT
i Psammomys_obesus.NESX01026517.1                       I 4 C 0
s Pteronotus_parnellii.KE867983.1                            1406 24 -     27784 T---AATC-CATAT-A-----AACTG-AC--AAG--CTT
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        242957 24 -    344369 T---AATC-CTTAT-A-----ATGTG-AG--AAA--CTT
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13243530 24 -  17261082 T---AATC-CATAT-A-----AATTG-AC--AAG--TTT
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             601483 24 -   3946241 T---AATC-CATAT-A-----AATTG-AC--AAG--TTT
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131531250 24 - 161321710 T---AATC-CATAT-A-----ATTTC-AC--AAG--TTT
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             26292 24 +     56732 T---AGTC-TGTAT-A-----AACTG-AC--AAG--TTT
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6802783 24 +   6970761 T---AGTC-TGTAT-A-----AACTG-AC--AAG--TTT
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             2176 24 +     18040 T---AGTC-TGTAT-A-----AACTG-AC--AAG--TTT
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                13341 24 +     68503 A---ACCT-CATAT-A-----AATTG-AT--CAG--TTT
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 1 C 0
s Rattus_norvegicus.chr11                                13912308 24 +  90463843 t---cat-tcatat-a-----aaatG-AC----AAGCTT
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1785157 24 +   2252614 T---Aatt-catat-a-----aacag-aa--aaa--ctt
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           12729 24 -     14454 T---AGTC-TGTAT-A-----AACTG-AC--AAG--TTT
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206374055 24 - 206558726 T---AGTC-TGTAT-A-----AACTG-AC--AAG--TTT
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44851703 24 -  45163003 T---AGTC-TGTAT-A-----AACTG-AC--AAG--TTT
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                16832 24 +    109198 A---AATC-CATAT-A-----AACTG-AC--AAG--TTT
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       5126 24 +     12214 A---ATCC-CATAT-A-----AATTG-AT--GAG--TTT
i Saiga_tatarica.SaiTat_scaffold_82192                  I 1 C 0
s Saimiri_boliviensis.NW_024100938.1                     15669691 24 -  43202129 T---AATC-TGTAT-A-----AACTG-AC--GAG--TTT
i Saimiri_boliviensis.NW_024100938.1                    I 6 C 0
s Saimiri_cassiquiarensis.k141_808270                        1554 24 +     34089 T---AATC-TGTAT-A-----AACTG-AC--GAG--TTT
i Saimiri_cassiquiarensis.k141_808270                   I 6 C 0
s Saimiri_macrodon.k141_2087127                              1495 24 -     60842 T---AATC-TGTAT-A-----AACTG-AC--GAG--TTT
i Saimiri_macrodon.k141_2087127                         I 6 C 0
s Saimiri_oerstedii.k141_841116                              1590 24 +     67014 T---AATC-TGTAT-A-----AACTG-AC--GAG--TTT
i Saimiri_oerstedii.k141_841116                         I 6 C 0
s Saimiri_sciureus.k141_1947592                              1568 24 +     60816 T---AATC-TGTAT-A-----AACTG-AT--GAG--TTT
i Saimiri_sciureus.k141_1947592                         I 6 C 0
s Saimiri_ustus.k141_1282476                                 1509 24 -     76454 T---AATC-TGTAT-A-----AACTG-AC--GAG--TTT
i Saimiri_ustus.k141_1282476                            I 6 C 0
s Sapajus_apella.ctg10                                   17338020 24 -  30362882 T---AATC-TGTAT-A-----AACTG-AC--GAG--TTT
i Sapajus_apella.ctg10                                  I 7 C 0
s Sapajus_macrocephalus.k141_966464                         17619 24 -     62485 T---AATC-TGTAT-A-----AACTG-AC--GAG--TTT
i Sapajus_macrocephalus.k141_966464                     I 7 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   28895 24 -    114521 T---AATC-CATAT-A-----GATTG-AC--AAG--TCC
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1527475                       24717 24 +     26421 T---AGTC-TGTAT-A-----AACTG-AC--AAG--TTT
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       5177 24 +     20762 T---AGTC-TGTAT-A-----AACTG-AC--AAG--TTT
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         38912 24 +     40653 T---AGTC-TGTAT-A-----AACTG-AC--AAG--TTT
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                            9469 24 -     12194 T---AGTC-TGTAT-A-----AACTG-AC--AAG--TTT
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     22891 24 -     27512 T---AGTC-TGTAT-A-----AACTG-AC--AAG--TTT
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         31910 24 -     33692 T---AGTC-TGTAT-A-----AACTG-AC--AAG--TTT
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   96493 20 -    120886 T---CAC-----AT-A-----AAGGA-AA----AAATTT
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            15548 24 +    739146 T---AATC-CTTAT-A-----AATTG-AA--TAG--TTT
i Solenodon_paradoxus.SolPar_flattened_line_1012        I 157 C 0
s Sorex_araneus.JH798170.1                               17747767 24 -  27805282 a---tatc-aataa-a-----aattg-aC--AAT--TGA
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2237073 12 +   2842873 ----------------------GTTC-ATAA--G--TTT
i Spermophilus_dauricus.KZ294190.1                      I 7 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             231939 24 -    276980 T---AATC-CTTAT-A-----ATGTG-AC--AAG--CTT
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            24502 24 +     62062 T---AATC-CATAT-G-----ATTTC-AC--AAG--TTT
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189269404 24 + 218635234 G---AATC-CATAT-A-----AATTG-AC--AAG--TTT
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                     13898883 24 +  13920577 T---AATC-TGTAT-A-----AACTG-AC--AAG--GTT
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               3353 24 -      6213 C---AAAC-CATAT-A-----AATTG-AC--AAG--TCT
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               12276 24 +     45698 T---AATC-CATAT-A-----AATTA-TC--TAA--TTT
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      804273 24 +   1148477 T---AATC-TGTAT-A-----AATTG-GC--ATG--TTT
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  54934 24 +     99546 T---AATC-TGTAT-A-----AATTG-GC--ATG--TTT
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               23596 24 +     42269 T---TATC-TGTAC-A-----AATTG-GC--AAG--TTT
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               56912 24 +     65473 T---TATC-TGTAC-A-----AATTG-GC--AAG--TTT
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194004207 24 - 194193292 T---AGTC-TGTAT-A-----AACTG-AC--AAG--TTT
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  1157 24 +      6782 T---AATT-CCCAT-A-----A-TTAAAC--AAG--TTT
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  133414 24 -    259118 T---AATC-CATAT-A-----TATTG-AC--AAG--TTT
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        23287 24 +     38948 T---AGTC-TGTAT-A-----AACTG-AC--AAG--TTT
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   17014 24 -     32910 T---AGTC-TGTAT-A-----AACTG-AC--AAG--TTT
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       22912 24 +     24652 T---AGTC-TGTAT-A-----AACTG-AC--AAG--TTT
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      1790 24 -      3559 T---AGTC-TGTAT-A-----AACTG-AC--AAG--TTT
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           39736 24 -     54611 T---AGTC-TGTAT-A-----AACTG-AC--AAG--TTT
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       15735 24 +     17312 T---AGTC-TGTAT-A-----AACTG-AC--AAG--TTT
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    23098 24 -     25040 T---AGTC-TGTAT-A-----AACTG-AC--AAG--TTT
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          1764 24 +      3528 T---AGTC-TGTAT-A-----AACTG-AC--AAG--TTT
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  48126 24 +     51589 T---AGTC-TGTAT-A-----AACTG-AC--AAG--TTT
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       11302 24 +     14732 T---AGTC-TGTAT-A-----AACTG-AC--AAG--TTT
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       1779 24 -     28054 T---AGTC-TGTAT-A-----AACTG-AC--AAG--TTT
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44656574 24 -  44834318 T---ATTC-TGTAT-A-----AACTG-AC--AAG--TTT
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        1584 24 +      3372 T---AGTC-TGTAT-A-----AACTG-AC--AAG--TTT
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   2752 24 +     90398 A---GTCC-CATAT-A-----AATTC-AT--GAG--TTT
i Tragulus_javanicus.TraJav_scaffold_14717              I 1 C 0
s Trichechus_manatus.JH594618.1                          16078858 24 +  31416278 C---AATT-Catat-a-----aatta-ac--aag--ttt
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2788710 24 -   3938065 T---AAGC-CATAT-A-----AATTG-AT--CAG--TTA
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    1237 24 +     13056 T---AAAC-CATAT-A-----AATTG-AT--CAG--TTA
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69310961 24 -  96451834 t---aatC-CATAT-A-----AATTG-AT--GAG--TTT
i Tursiops_truncatus.MRVK01000923.1                     I 61 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 24099 24 -     25548 T---AATC-CATAT-A-----GATTG-AC--AAG--TTT
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6511518 24 +  28682327 T---AATC-CTTAT-A-----ATGTG-AC--AAG--CTT
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  2346 24 -     20643 T---AATC-CATGT-A-----AATTG-AC--AAG--TTT
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             21890 24 -     33872 T---AATC-CATGT-A-----AATTG-AC--AAG--TTT
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1522209 16 -   2331223 T---AATC-CATAT-A-----AATTG-------------
i Vicugna_pacos.KN269600.1                              I 1 I 3
s Vulpes_lagopus.VulLag_flattened_line_2045                134671 24 -    281493 T---AATC-CATAT-A-----ACGTG-AC--AAG--TTT
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       124172 12 -    134049 ----------------------GTTC-ACAA--G--TTT
i Xerus_inauris.XerIna_scaffold_7898                    I 7 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        211198 24 -    227762 T---AATC-CTTAC-A-----ATGTG-AC--AAG--CTT
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     12379 22 -     20485 T---AGTC-TGAAT-A-----CACTA-AC----A--TAC
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           4463 24 -      8775 T---AATC-CATAT-A-----AATTG-AT--GAG--TTT
i Ziphius_cavirostris.ZipCav_flattened_line_127025      I 61 C 0
e Bos_taurus.CM000177.6                                 136292828  0 - 158972876 C
e Bos_mutus.JH883513.1                                     569472  8 -    998990 I
e Bos_indicus.CM003021.1                                138137095  0 - 161108492 C
e Bison_bison.KN264915.1                                  6556860  0 +   6870073 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16291  1 -    119109 I
e Octodon_degus.JH651621.1                                3678743 1836 +  10294119 I
e Heterocephalus_glaber.JH602058.1                        2548028 229 +  31725842 I
e Fukomys_damarensis.KN123630.1                          13889876  0 -  19261668 C
e Dolichotis_patagonum.DolPat_scaffold_14102                33375  0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             56104 16 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                14631 16 +     26546 I
e Cavia_tschudii.CavTsc_scaffold_488                       173989  0 +    436027 C
e Cavia_porcellus.DS562889.1                             15795798  0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15783848 16 -  24422027 I

a score=0.000000
s hg38.chr4_GL000008v2_random                                8858 3 +    209709 AGA
s Acinonyx_jubatus.LLWD01000356.1                         2030934 3 +   3721120 AGA
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    109219 2 -    189883 AC-
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 I 324
s Ailuropoda_melanoleuca.LNAT01000321.1                  10654269 3 +  23371972 AGA
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7090989 3 -  16596857 AGA
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                    9952 3 -     22067 CTA
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_3103707                  59871 3 +     61638 AGA
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        51679 3 +     53391 AGA
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         2404 3 +     72529 AGA
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          1979 3 +      3797 AGA
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             7168 3 -     18050 AGA
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  8279 3 -     11521 AGA
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              7845 3 -     21359 AGA
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1856473                                6222 3 +      7227 AGA
i Alouatta_juara.k141_1856473                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          7136 3 -     10438 AGA
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            3792 3 +      7047 AGA
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             7078 3 +     10410 AGA
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                             881 3 -      4927 AGA
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             3809 3 +      6429 AGA
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3517690 3 +   4113121 AGA
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      387883 3 -    631301 AAA
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Aotus_azarae.k141_3170768                                 59527 3 +     78111 AGA
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            2454 3 +     22701 AGA
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5746412 3 +   9889416 AGA
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             2997 3 -    104377 AGA
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               3003 3 +     23246 AGA
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     1036 3 +      5067 GGA
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      14990 3 +     17483 AGA
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 6275 3 -     29036 AAA
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9536269 3 +  39197703 AGA
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             57553 3 +     85812 AGA
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 8552 3 +     89302 AGA
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             13062 3 -     58268 AGA
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             61048 3 +    119057 AGA
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               2999 3 -     25888 AGA
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 3749 3 -     16375 AGG
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                                69 3 +      2719 AGG
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26377701 3 +  51448160 AGA
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        2932 3 -     13118 AGA
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   40791 3 -     72089 AGA
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bubalus_bubalis.KI419065.1                              1228523 3 -   1914593 AGA
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               110888 3 -    171031 AGT
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                  9914 3 +    125063 AGA
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                11962 3 -    216513 AGT
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        4502 3 -    134917 AGT
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3217150 3 -   8989139 AGA
i Camelus_bactrianus.KN276303.1                         I 3 C 0
s Camelus_dromedarius.KN271192.1                           394854 3 -  15254737 AGA
i Camelus_dromedarius.KN271192.1                        I 3 C 0
s Camelus_ferus.KB016973.1                                2970588 3 +   6889770 AGA
i Camelus_ferus.KB016973.1                              I 3 C 0
s CanFam4.chr31                                          11515648 3 +  39901454 AGA
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   10666 3 +     87036 AGA
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11262309 3 -  35597290 AGA
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11084838 3 +  39895921 AGA
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16451862 3 -  44759192 AGA
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21322797 3 + 157394656 AGA
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135704024 3 - 157403528 AGA
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_647363                  1546 3 +      1887 AGA
i Capromys_pilorides.CapPil_scaffold_647363             C 0 C 0
s Carlito_syrichta.NW_007248099.1                          306139 3 +    345090 AGA
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               57067 3 +     67245 AAA
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   27555 3 +     33760 AGA
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   156360 3 -    276539 AGA
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18887740 3 -  29618158 AGA
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 5284 3 -     26817 AGA
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                 9527 3 +     25043 AGA
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         5176 3 +     21754 AGA
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4360858 3 +   7569818 AGA
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623          613 3 -      9338 AGA
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6551663 3 +   6739814 AGA
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      53140 3 -     54931 AGA
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         18124 3 -     19697 AGA
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         55655 3 -    107033 AGA
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        2100 3 -      3853 AGA
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          26033 3 +     30494 AGA
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           2057 3 -      4022 AGA
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          1950 3 -      3505 AGA
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           20740 3 +     35983 AGA
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11987276 3 +  12117833 AGA
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46474029 3 +  46592721 AGA
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      31856 3 +     33420 AGA
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        1892 3 -      3443 AGA
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      2883 3 -      4669 AGA
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        2683 3 -      4411 AGA
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         2208 3 -      4205 AGA
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_1070855           422 3 -      1715 AAC
i Chaetophractus_vellerosus.ChaVel_scaffold_1070855     C 0 C 0
s Cheirogaleus_major.k141_1157592                           56055 3 -     68416 AGA
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            5101 3 +     13308 AGA
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             2562 3 -     18223 AGA
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             19585 3 +     25473 AGA
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           38624 3 +     57117 AGA
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          43299 3 +     54541 AGA
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15958907 3 +  43084221 aga
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         68109 3 +    196370 AGA
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          12290 3 +     40510 AGA
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15135490 3 -  15256731 AGA
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      30536 3 -     53260 AGA
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101140985 3 + 101219884 AGA
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                14034 3 -     21363 GGC
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           759340 3 +    964067 GGC
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_141308              6135 3 -     12508 AGA
i Chrysochloris_asiatica.ChrAsi_scaffold_141308         C 0 C 0
s Colobus_angolensis.KN985967.1                          10879564 3 +  10971483 AGA
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147660722 3 + 156195979 AGA
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            12709 3 +     23629 AGA
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60610325 3 +  78930452 AGA
i Condylura_cristata.JH655880.1                         I 2 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         36774 3 -     40477 AGA
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 274639 3 -    399297 AAA
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53025840 3 +  72327488 taa
i Cricetulus_griseus.LT883672.1                         C 0 I 332
s Crocidura_indochinensis.CroInd_scaffold_38409             17079 3 -     19186 AGG
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            48959 3 -     70449 AGA
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 27679 3 -     67205 AGA
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          179237 3 -   6883506 AAT
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16841922 3 +  31942871 AGA
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80034385 3 -  96802777 AGA
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18696380 3 -  18957592 AAA
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 319519 3 +    993696 AGA
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_170113                  778 3 +       818 AGA
i Diceros_bicornis.DicBicMic_scaffold_170113            C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   154798 3 +    228994 AGA
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3652537 3 +   4240102 AGA
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 24092 3 +     28912 AGA
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Echinops_telfairi.JH980316.1                           22991628 3 -  44670279 AGA
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                  9757 3 +     24177 AGA
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1489051 3 +   1727528 AGA
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7803811 3 +  15467074 AGA
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        236473 3 -    369425 tat
i Ellobius_lutescens.LOEQ01003611.1                     I 167 I 356
s Ellobius_talpinus.LOJH01090055.1                           3488 3 -      7838 aaa
i Ellobius_talpinus.LOJH01090055.1                      I 173 I 356
s Enhydra_lutris.KZ291749.1                              85868719 3 +  99434291 AGA
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Equus_asinus.JREZ01000062.1                             5850239 3 -   7175178 aga
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13348741 3 +  41866177 aga
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          10231 3 +     92910 aga
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11529827 3 +  16010500 AGA
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48767668 3 -  48907691 AGA
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          312587 3 +    330699 AGA
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             59017 3 +     89355 AGA
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              2102 3 +     13586 AGA
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               2037 3 -      6809 AGA
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             8510 3 +     36558 AGA
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             4826 3 +     60246 AGA
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 8314 3 +    109717 AGA
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               12688 3 +     16540 AGA
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                12964 3 +     27497 AGA
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           15426 3 +     26808 AGA
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                30154 3 +     46535 AGA
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              12877 3 -     29447 AGA
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129889911 3 - 159252932 AGA
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129276986 3 - 158578461 AGA
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 18120 3 +     52776 AGA
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Galago_moholi.ctg555                                     208049 3 -    847004 AGA
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           10430 3 -     43889 AGA
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           7501 3 +     27357 AGA
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               153377 3 +    324696 AGA
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    178572 3 -    189561 AGA
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                            9780 3 -     18683 GTA
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               2257 3 -     14630 AGA
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119649356 3 - 195582420 AGA
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   74326 3 +    118900 GTA
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                         2672 3 +      3980 AGA
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             25147 3 +     26611 AGA
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             2608 3 +     56096 AGA
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        25883 3 -     42470 AGA
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        42478 3 -     54384 AGA
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              14167 3 +     53719 AGA
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                25056 3 -     91191 AGA
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               53629 3 +     73687 AGA
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              144635 3 +    277961 CGA
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      276082 3 -    477199 AGA
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              5241 3 -      9143 AGA
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                       147 3 -   7690867 AGA
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 13234 3 -     67322 AGA
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hylobates_abbotti.k141_493872                              2074 3 +      5897 AGA
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_282275                               1286 3 +      1846 AGA
i Hylobates_agilis.k141_282275                          C 0 C 0
s Hylobates_klossii.k141_584463                               450 3 -      1009 AGA
i Hylobates_klossii.k141_584463                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14621619 3 -  25970782 AGA
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1133650                            1508 3 -      2775 AGA
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             30111 3 -     60944 AGA
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     3280 3 +     22540 AGA
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7123165 3 +  13083262 AGA
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_1884019                                    343 3 -      2196 AGA
i Indri_indri.k141_1884019                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               6375 3 +     17520 AGA
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8562672 3 +  11848649 cta
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               21205 3 +     37189 AGA
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          47123 3 -    147782 AGA
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   111142 3 -    115756 AGA
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258404156 3 - 285822530 AGA
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        21049 3 +     39228 GGA
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            50422 3 +     63517 GGA
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        75643 3 +    116806 GGA
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     28687 3 -     33031 GGA
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3082937 3 -   3498232 AGA
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    10141 3 +     22452 AGA
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            133547 3 +   3060487 AGA
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19244751 3 +  19376315 AGA
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            7801 3 +     84689 AGA
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3775552 3 +   6799190 AGA
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20588407 3 -  62548349 AGA
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11084294 3 +  39895028 AGA
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             16438 3 +     74745 AGA
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12702944 3 +  12821369 AGA
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               5040 3 +      6569 AGA
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           43342 3 +     63263 AGA
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_1068107                               11918 3 +     12679 AGA
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                1491 3 +      3017 AGA
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  43103 3 -     79256 AGA
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196032021 3 + 196197964 AGA
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11442127 3 +  11645122 AGA
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   2050 3 -     46448 AGA
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                1881 3 -      3617 AGA
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 12213 3 -     55006 AGA
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43837250 3 +  43892939 AGA
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                4472 3 -      5978 AGA
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               2055 3 -     27140 AGA
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43433911 3 -  43563597 AGA
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4446737 3 -   4543643 AGA
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            143671 3 +    252755 ACA
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             33745 3 +     58827 ACA
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36871009 3 +  64221397 AGA
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       61828 3 -    234502 AGA
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_1828            226210 3 -    226874 AGA
i Mellivora_capensis.MelCap_flattened_line_1828         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233                8751 3 +     15977 AAA
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 I 381
s Mesocricetus_auratus.KB708139.1                         1043560 3 -  26018355 tta
i Mesocricetus_auratus.KB708139.1                       C 0 I 353
s Mesoplodon_bidens.MesBid_scaffold_183284                   1245 3 +      2166 AGA
i Mesoplodon_bidens.MesBid_scaffold_183284              C 0 C 0
s Microcebus_murinus.CM007691.1                          16507275 3 +  47401472 AGA
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  28576 3 -     48017 AGA
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               20227 3 -     32043 AAA
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22816676 1 -  98408828 --a
i Microtus_ochrogaster.CM001673.1                       I 224 I 356
s Miniopterus_natalensis.LDJU01000022.1                   8207000 3 +  10048721 GGA
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            31671 3 +     45743 GGA
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        32570 3 +     34273 AGA
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         8241 3 -    104932 AGA
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     2680 3 +      8497 AGA
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 143969 3 +    154973 AGA
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                158765 3 +    265003 AAA
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 2157 3 -      4346 AGA
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  141862 3 -    168139 AGA
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          16650 3 -    100666 AGA
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70763188 3 +  92629107 AAA
i Mus_caroli.LT608236.1                                 C 0 I 330
s Mus_musculus.chr16                                     75486245 3 +  98207768 taa
i Mus_musculus.chr16                                    C 0 I 337
s Mus_pahari.LT608305.1                                  67552406 3 +  89017189 AAA
i Mus_pahari.LT608305.1                                 C 0 I 336
s Mus_spretus.CM004110.1                                 74327421 3 +  97876770 AAA
i Mus_spretus.CM004110.1                                C 0 I 334
s Muscardinus_avellanarius.MusAve_scaffold_9643              8283 3 +     98495 GTA
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4421102 3 -  28371801 AGA
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     87235 3 -    117718 CAA
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               964977 3 +   8389877 AGA
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5016659 3 +   6462685 AGA
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3462563 3 -   3747815 AGA
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         7752 3 +     66751 AGA
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             2626 3 -      8794 CAC
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL204535.1                           2056999 3 +   2354432 AAA
i Nannospalax_galili.KL204535.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               4953 3 +     48152 AGA
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4481840 3 -  14209539 AGA
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3948580 3 -   4490290 AGA
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  46879 3 +     94413 TGA
i Noctilio_leporinus.NocLep_scaffold_12062              I 1 C 0
s Nomascus_annamensis.k141_1223136                          10742 3 -     11253 AGA
i Nomascus_annamensis.k141_1223136                      C 0 C 0
s Nomascus_concolor.k141_468488                              1385 3 -      1482 AGA
i Nomascus_concolor.k141_468488                         C 0 C 0
s Nomascus_gabriellae.k141_906566                            1374 3 -      2544 AGA
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             21848 3 -  18771707 AGA
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_844529                                  1123 3 +      2124 AGA
i Nomascus_siki_a.k141_844529                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                27287 3 +   3668941 AGA
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65564130 3 -  95554990 AGA
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                             975 3 +      6470 AGA
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65666499 3 +  89412551 AGA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4993116 3 -  23139505 AGA
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Odobenus_rosmarus.KB229369.1                             676497 3 -   3126709 AGA
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1077284 3 +   1425656 AGA
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         34445 3 +     78940 AGA
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  121960 3 +    145789 AAA
i Ondatra_zibethicus.OndZib_scaffold_6821               I 175 I 349
s Onychomys_torridus.OnyTor_scaffold_12578                  33723 3 +     62360 AAA
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 I 345
s Orcinus_orca.KB316965.1                                 7222267 3 -   7562323 AGA
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              40658 3 -     66828 AGA
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141872790 3 + 163896628 AGA
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      304626 3 -    505867 AGA
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       36140 3 +     38679 AGA
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18005581 3 -  38779656 AGA
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134074858 3 - 275406953 AGA
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      76072 3 +    140051 AGA
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127571601 3 - 205426864 AGA
i Pan_paniscus.CM003386.1                               C 0 I 4
s Pan_troglodytes.CM009241.2                            120148754 3 - 196562556 AGA
i Pan_troglodytes.CM009241.2                            C 0 I 4
s Panthera_onca.PanOnc_flattened_line_1615                  31310 3 +    295523 AGA
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3634911 3 +  18214204 AGA
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5024692 3 -   6340057 AGA
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1063716 3 -   1292953 AGA
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188152695 3 - 188283584 AGA
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            48907 3 +     76494 AGA
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47510092 3 +  47705337 AGA
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 64074 3 -    104429 AGA
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  13860 3 -     29451 AGA
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                34263 3 +     35859 AGA
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    112638 3 -    135482 AGA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           2186 3 -     23713 AGA
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            21484 3 -     27972 AGA
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      40088 3 -     45160 GGA
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4946897 2 -   8017169 Aa-
i Peromyscus_maniculatus.KI615518.1                     C 0 I 347
s Phocoena_phocoena.PhoPho_flattened_line_11948            118882 3 -    122454 AGA
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           1953 3 -      3310 AGA
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       21859 3 -     82327 AGA
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           18611 3 +     19957 AGA
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26736620 3 +  26888534 AGA
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            93750 3 +    112873 AGA
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             40601 3 -     61926 ATA
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        22030 3 +     78826 AGA
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              5981 3 -     15800 AGA
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                         9179 3 -     16101 AGA
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          2488 3 +      9673 AGA
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13471482 3 -  19735023 AGA
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           10390 3 -     31692 AGA
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           2951 3 +     21690 AGA
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       19827 3 +     44506 AGA
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        20037 3 +     67491 AGA
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      10282 3 -     98129 AGA
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     19883 3 +    147771 AGA
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        20133 3 -     23762 AGA
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                           599 3 -     55515 AGA
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         19952 3 +    152463 AGA
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      6712 3 +      8943 AGA
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                          9672 3 +    134592 AGA
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          20262 3 -     75465 AGA
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              184147 3 -    373494 AGA
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19804054 3 +  19899266 AGA
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               2191 3 -     15069 AGA
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              2325 3 +     14865 AGA
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                73493 3 +     78963 AGA
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6845531 3 +  12164890 AGA
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     13993 3 -     30946 agg
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                          676 3 +     11805 AGG
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           40012 3 +     52369 AGG
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         32400 3 -     44753 AGG
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            14321 3 +     27322 AGG
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       13960 3 -     53241 AGG
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         36232 3 -     48185 AGG
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           30279 3 +     77221 AAA
i Psammomys_obesus.NESX01026517.1                       C 0 I 392
s Pteronotus_parnellii.KE867983.1                            1430 3 -     27784 AAA
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        242981 3 -    344369 AGA
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13243554 3 -  17261082 AGA
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             601507 3 -   3946241 AGA
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131531274 3 - 161321710 AGA
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             26316 3 +     56732 AGA
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6802807 3 +   6970761 AGA
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             2200 3 +     18040 AGA
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                13365 3 +     68503 AGA
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13912332 3 +  90463843 AAA
i Rattus_norvegicus.chr11                               C 0 I 317
s Rhinolophus_sinicus.LVEH01000179.1                      1785181 3 +   2252614 aGA
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           12753 3 -     14454 AGA
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206374079 3 - 206558726 AGA
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44851727 3 -  45163003 AGA
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                16856 3 +    109198 AGA
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       5150 3 +     12214 AGA
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15669715 3 -  43202129 AGA
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        1578 3 +     34089 AGA
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              1519 3 -     60842 AGA
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              1614 3 +     67014 AGA
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              1592 3 +     60816 AGA
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 1533 3 -     76454 AGA
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17338044 3 -  30362882 AGA
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         17643 3 -     62485 AGA
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   28919 3 -    114521 AGA
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1527475                       24741 3 +     26421 AGA
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       5201 3 +     20762 AGA
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         38936 3 +     40653 AGA
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                            9493 3 -     12194 AGA
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     22915 3 -     27512 AGA
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         31934 3 -     33692 AGA
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   96513 3 -    120886 AAA
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 I 343
s Solenodon_paradoxus.SolPar_flattened_line_1012            15572 3 +    739146 AGA
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17747791 3 -  27805282 GGA
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2237085 3 +   2842873 AGA
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             231963 3 -    276980 AGA
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            24526 3 +     62062 AGA
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189269428 3 + 218635234 AGA
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                     13898907 3 +  13920577 AGA
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               3377 3 -      6213 AGA
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               12300 3 +     45698 CAC
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      804297 3 +   1148477 AGA
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  54958 3 +     99546 AGA
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               23620 3 +     42269 AGA
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               56936 3 +     65473 AGA
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194004231 3 - 194193292 AGA
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  1181 3 +      6782 AAC
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  133438 3 -    259118 AAA
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        23311 3 +     38948 AGA
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   17038 3 -     32910 AGA
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       22936 3 +     24652 AGA
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      1814 3 -      3559 AGA
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           39760 3 -     54611 AGA
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       15759 3 +     17312 AGA
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    23122 3 -     25040 AGA
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          1788 3 +      3528 AGA
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  48150 3 +     51589 AGA
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       11326 3 +     14732 AGA
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       1803 3 -     28054 AGA
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44656598 3 -  44834318 AGA
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        1608 3 +      3372 AGA
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   2776 3 +     90398 AGA
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16078882 3 +  31416278 aga
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2788734 3 -   3938065 AGA
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    1261 3 +     13056 AGA
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69310985 3 -  96451834 AGA
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 24123 3 -     25548 AGA
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6511542 3 +  28682327 AGA
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  2370 3 -     20643 AGA
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             21914 3 -     33872 AGA
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1522228 3 -   2331223 AGA
i Vicugna_pacos.KN269600.1                              I 3 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                134695 3 -    281493 AGA
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       124184 3 -    134049 AGA
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        211222 3 -    227762 AGA
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     12401 3 -     20485 CTA
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           4487 3 -      8775 AGA
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Bos_taurus.CM000177.6                                 136292828 0 - 158972876 C
e Bos_mutus.JH883513.1                                     569472 8 -    998990 I
e Bos_indicus.CM003021.1                                138137095 0 - 161108492 C
e Bison_bison.KN264915.1                                  6556860 0 +   6870073 C
e Antilocapra_americana.AntAmePen_scaffold_42841            28309 0 +     33004 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16291 1 -    119109 I
e Octodon_degus.JH651621.1                                3678743 1836 +  10294119 I
e Heterocephalus_glaber.JH602058.1                        2548028 229 +  31725842 I
e Fukomys_damarensis.KN123630.1                          13889876 0 -  19261668 C
e Dolichotis_patagonum.DolPat_scaffold_14102                33375 0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             56104 16 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                14631 16 +     26546 I
e Ctenodactylus_gundi.CteGun_scaffold_447                  205376 0 -    956709 C
e Cavia_tschudii.CavTsc_scaffold_488                       173989 0 +    436027 C
e Cavia_porcellus.DS562889.1                             15795798 0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15783848 16 -  24422027 I

a score=0.000000
s hg38.chr4_GL000008v2_random                                8861  4 +    209709 ATA----------------T
s Acinonyx_jubatus.LLWD01000356.1                         2030937  4 +   3721120 ATG----------------T
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    109545  4 -    189883 AAG----------------T
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 324 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10654272  4 +  23371972 GTA----------------G
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7090992  4 -  16596857 Ata----------------t
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                    9955  4 -     22067 AAA----------------T
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_3103707                  59874  4 +     61638 ATA----------------T
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        51682  4 +     53391 ATA----------------T
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         2407  4 +     72529 ATA----------------T
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          1982  4 +      3797 ATA----------------T
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             7171  4 -     18050 ATA----------------T
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  8282  4 -     11521 ATA----------------T
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              7848  4 -     21359 ATA----------------T
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1856473                                6225  4 +      7227 ATA----------------T
i Alouatta_juara.k141_1856473                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          7139  4 -     10438 ATA----------------T
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            3795  4 +      7047 ATA----------------T
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             7081  4 +     10410 ATA----------------T
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                             884  4 -      4927 ATA----------------T
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             3812  4 +      6429 ATA----------------T
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3517693  4 +   4113121 ATA----------------T
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      387886  4 -    631301 ATA----------------G
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Aotus_azarae.k141_3170768                                 59530  4 +     78111 ATA----------------T
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            2457  4 +     22701 ATA----------------T
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5746415  4 +   9889416 ATA----------------T
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             3000  4 -    104377 ATA----------------T
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               3006  4 +     23246 ATA----------------T
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     1039  4 +      5067 ATA----------------A
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      14993  4 +     17483 ATA----------------T
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 6278  4 -     29036 ATA----------------G
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9536272  4 +  39197703 ATA----------------T
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             57556  4 +     85812 ATA----------------T
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 8555  4 +     89302 ATA----------------T
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             13065  4 -     58268 ATA----------------T
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             61051  4 +    119057 ATA----------------T
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               3002  4 -     25888 ATA----------------T
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 3752  4 -     16375 ATA----------------T
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                                72  4 +      2719 ATA----------------T
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26377704 20 +  51448160 ATAGTTTAGAGTTTATAACC
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        2935 20 -     13118 ATAGTTTAGAGTTTATAACC
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   40794  4 -     72089 ATA----------------T
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bubalus_bubalis.KI419065.1                              1228526  4 -   1914593 ATA----------------T
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               110891  4 -    171031 ATA----------------T
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                  9917  4 +    125063 ATA----------------T
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                11965  4 -    216513 ATA----------------T
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        4505  4 -    134917 ATA----------------T
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3217153  4 -   8989139 TTA----------------T
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           394857  4 -  15254737 TTA----------------T
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2970591  4 +   6889770 TTA----------------T
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11515651  4 +  39901454 ACA----------------T
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   10669  4 +     87036 ACA----------------T
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11262312  4 -  35597290 ACA----------------T
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11084841  4 +  39895921 ACA----------------T
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16451865  4 -  44759192 ACA----------------T
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21322800  4 + 157394656 ATA----------------T
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135704027  4 - 157403528 ATA----------------T
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_647363                  1549  4 +      1887 ATA----------------T
i Capromys_pilorides.CapPil_scaffold_647363             C 0 C 0
s Carlito_syrichta.NW_007248099.1                          306142  4 +    345090 ATA----------------T
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               57070  4 +     67245 ATA----------------G
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   27558  4 +     33760 ATA----------------T
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   156363  4 -    276539 ATA----------------T
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18887743  4 -  29618158 ATA----------------T
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 5287  4 -     26817 ATA----------------T
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                 9530  4 +     25043 ATA----------------T
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         5179  4 +     21754 ATA----------------T
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4360861  4 +   7569818 Ata----------------t
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623          616  4 -      9338 ATA----------------T
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6551666  4 +   6739814 ATA----------------T
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      53143  4 -     54931 ATA----------------T
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         18127  4 -     19697 ATA----------------T
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         55658  4 -    107033 ATA----------------T
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        2103  4 -      3853 ATA----------------T
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          26036  4 +     30494 ATA----------------T
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           2060  4 -      4022 ATA----------------T
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          1953  4 -      3505 ATA----------------T
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           20743  4 +     35983 ATA----------------T
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11987279  4 +  12117833 ATA----------------T
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46474032  4 +  46592721 ATA----------------T
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      31859  4 +     33420 ATA----------------T
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        1895  4 -      3443 ATA----------------T
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      2886  4 -      4669 ATA----------------T
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        2686  4 -      4411 ATA----------------T
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         2211  4 -      4205 ATA----------------T
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_1070855           425  4 -      1715 ATA----------------T
i Chaetophractus_vellerosus.ChaVel_scaffold_1070855     C 0 C 0
s Cheirogaleus_major.k141_1157592                           56058  4 -     68416 ATA----------------C
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            5104  4 +     13308 ATA----------------C
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             2565  4 -     18223 ATA----------------T
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             19588  4 +     25473 ATA----------------T
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           38627  4 +     57117 ATA----------------T
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          43302  4 +     54541 ATA----------------T
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15958910  4 +  43084221 ata----------------t
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         68112  4 +    196370 ATA----------------T
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          12293  4 +     40510 ATA----------------T
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15135493  4 -  15256731 ATA----------------T
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      30539  4 -     53260 ATA----------------T
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101140988  4 + 101219884 ATA----------------T
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                14037  4 -     21363 ATA----------------T
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           759343  4 +    964067 ATA----------------T
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_141308              6138  4 -     12508 ATA----------------T
i Chrysochloris_asiatica.ChrAsi_scaffold_141308         C 0 C 0
s Colobus_angolensis.KN985967.1                          10879567  4 +  10971483 ATA----------------T
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147660725  4 + 156195979 ATA----------------T
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            12712  4 +     23629 ATA----------------T
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60610328  4 +  78930452 CTA----------------T
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         36777  4 -     40477 ATA----------------T
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 274642  4 -    399297 AAA----------------T
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53026175  4 +  72327488 aaa----------------t
i Cricetulus_griseus.LT883672.1                         I 332 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             17082  4 -     19186 TTA----------------T
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            48962  4 -     70449 ATG----------------T
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 27682  4 -     67205 ATA----------------T
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          179240  4 -   6883506 ATa----------------t
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16841925  4 +  31942871 ATA----------------T
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80034388 20 -  96802777 ATAGTTTAGAGTTTATAACT
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18696383  4 -  18957592 ATA----------------G
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 319522  4 +    993696 ATA----------------T
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_170113                  781  4 +       818 ATA----------------T
i Diceros_bicornis.DicBicMic_scaffold_170113            C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   154801  4 +    228994 CTA----------------T
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3652540  4 +   4240102 TTA----------------C
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 24095  4 +     28912 TTA----------------C
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Echinops_telfairi.JH980316.1                           22991631  4 -  44670279 GGT----------------T
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                  9760  4 +     24177 ATA----------------T
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1489054  4 +   1727528 ATA----------------T
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7803814  4 +  15467074 AAa----------------t
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        236832  4 -    369425 AAA----------------T
i Ellobius_lutescens.LOEQ01003611.1                     I 356 C 0
s Ellobius_talpinus.LOJH01090055.1                           3847  4 -      7838 AAA----------------T
i Ellobius_talpinus.LOJH01090055.1                      I 356 C 0
s Enhydra_lutris.KZ291749.1                              85868722  4 +  99434291 ATA----------------T
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Equus_asinus.JREZ01000062.1                             5850242  4 -   7175178 aaa----------------t
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13348744  4 +  41866177 aaa----------------t
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          10234  4 +     92910 aaa----------------t
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11529830  4 +  16010500 ATA----------------C
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48767671  4 -  48907691 ATA----------------T
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          312590 20 +    330699 ATAGTTTAGAGTTTATAACT
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             59020 20 +     89355 ATAGTTTAGAGTTTATAACT
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              2105  4 +     13586 ATA----------------T
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               2040  4 -      6809 ATA----------------T
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             8513  4 +     36558 ATA----------------T
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             4829  4 +     60246 ATA----------------T
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 8317  4 +    109717 ATA----------------T
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               12691  4 +     16540 ATA----------------T
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                12967  4 +     27497 ATA----------------T
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           15429  4 +     26808 ATA----------------T
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                30157  4 +     46535 ATA----------------T
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              12880  4 -     29447 ATA----------------T
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129889914  4 - 159252932 ATG----------------T
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129276989  4 - 158578461 ACG----------------T
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 18123  4 +     52776 ATG----------------T
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Galago_moholi.ctg555                                     208052  4 -    847004 ATA----------------T
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           10433  4 -     43889 ATA----------------T
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           7504  4 +     27357 ATA----------------T
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               153380  4 +    324696 ATA----------------T
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    178575  4 -    189561 ATA----------------T
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                            9783  4 -     18683 ATA----------------T
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               2260  4 -     14630 ATA----------------T
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119649359  4 - 195582420 ATA----------------T
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   74329  4 +    118900 ATA----------------T
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                         2675  4 +      3980 ATA----------------T
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             25150  4 +     26611 ATA----------------T
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             2611  4 +     56096 ATA----------------T
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        25886  4 -     42470 ATA----------------T
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        42481  4 -     54384 ATA----------------T
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              14170  4 +     53719 ATG----------------T
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                25059  4 -     91191 ATA----------------T
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               53632  4 +     73687 GTG----------------T
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              144638  4 +    277961 ACA----------------T
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      276085  4 -    477199 ATA----------------T
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              5244  4 -      9143 ATA----------------T
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                       150  4 -   7690867 ATA----------------T
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 13237  4 -     67322 AGG----------------T
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hylobates_abbotti.k141_493872                              2077  4 +      5897 ATA----------------T
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_282275                               1289  4 +      1846 ATA----------------T
i Hylobates_agilis.k141_282275                          C 0 C 0
s Hylobates_klossii.k141_584463                               453  4 -      1009 ATA----------------T
i Hylobates_klossii.k141_584463                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14621622  4 -  25970782 ATA----------------T
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1133650                            1511  4 -      2775 ATA----------------T
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             30114  4 -     60944 ATA----------------T
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     3283  4 +     22540 ATA----------------C
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7123168  4 +  13083262 ATA----------------C
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_1884019                                    346  4 -      2196 ATA----------------T
i Indri_indri.k141_1884019                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               6378 18 +     17520 ATAGTTTAG--TTTATAACT
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8562675  4 +  11848649 aaa----------------t
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               21208 20 +     37189 ATGGTTTAGAGTTTATAATT
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          47126  4 -    147782 ATA----------------T
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   111145  4 -    115756 ATA----------------T
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258404159  4 - 285822530 ATA----------------T
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        21052  4 +     39228 ATA----------------T
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            50425  4 +     63517 ATA----------------T
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        75646  4 +    116806 ATA----------------T
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     28690  4 -     33031 ATA----------------T
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3082940  4 -   3498232 ATA----------------T
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    10144  4 +     22452 ATA----------------T
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            133550 15 +   3060487 ATAG---AG--TTTATAACT
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19244754  4 +  19376315 ATA----------------T
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            7804  4 +     84689 ATA----------------T
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3775555  4 +   6799190 ATA----------------T
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20588410  4 -  62548349 ATA----------------t
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11084297  4 +  39895028 ACA----------------T
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             16441  4 +     74745 ATA----------------T
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12702947  4 +  12821369 ATA----------------T
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               5043  4 +      6569 ATA----------------T
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           43345  4 +     63263 ATA----------------T
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_1068107                               11921  4 +     12679 ATA----------------T
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                1494  4 +      3017 ATA----------------T
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  43106  4 -     79256 ATA----------------T
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196032024  4 + 196197964 ATA----------------T
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11442130  4 +  11645122 ATA----------------T
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   2053  4 -     46448 ATA----------------T
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                1884  4 -      3617 ATA----------------T
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 12216  4 -     55006 ATA----------------T
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43837253  4 +  43892939 ATA----------------T
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                4475  4 -      5978 ATA----------------T
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               2058  4 -     27140 ATA----------------T
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43433914  4 -  43563597 ATA----------------T
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4446740  4 -   4543643 ATA----------------T
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            143674  4 +    252755 ATA----------------C
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             33748  4 +     58827 ATA----------------C
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36871012  4 +  64221397 ATA----------------C
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       61831  4 -    234502 ATA----------------T
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_1828            226213  4 -    226874 ATA----------------T
i Mellivora_capensis.MelCap_flattened_line_1828         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233                9135  4 +     15977 AAA----------------T
i Meriones_unguiculatus.MerUng_scaffold_52233           I 381 C 0
s Mesocricetus_auratus.KB708139.1                         1043916  4 -  26018355 aaa----------------t
i Mesocricetus_auratus.KB708139.1                       I 353 C 0
s Mesoplodon_bidens.MesBid_scaffold_183284                   1248 20 +      2166 ATAGTTTAGAGTTTATAACT
i Mesoplodon_bidens.MesBid_scaffold_183284              C 0 C 0
s Microcebus_murinus.CM007691.1                          16507278  4 +  47401472 ATA----------------T
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  28579  4 -     48017 GCC----------------T
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               20230  4 -     32043 ATA----------------G
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22817033  4 -  98408828 AAA----------------T
i Microtus_ochrogaster.CM001673.1                       I 356 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8207003  4 +  10048721 ATA----------------t
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            31674  4 +     45743 ATA----------------T
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        32573  4 +     34273 ATA----------------T
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         8244  4 -    104932 ATA----------------T
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     2683  4 +      8497 ATA----------------T
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 143972 20 +    154973 ATAGTTTAGAGTTTATAACT
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                158768  4 +    265003 GTA----------------T
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 2160  4 -      4346 ATA----------------T
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  141865  4 -    168139 ATG----------------T
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          16653  4 -    100666 GTA----------------T
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70763521  4 +  92629107 aaa----------------t
i Mus_caroli.LT608236.1                                 I 330 C 0
s Mus_musculus.chr16                                     75486585  4 +  98207768 aaa----------------t
i Mus_musculus.chr16                                    I 337 C 0
s Mus_pahari.LT608305.1                                  67552745  4 +  89017189 aaa----------------t
i Mus_pahari.LT608305.1                                 I 336 C 0
s Mus_spretus.CM004110.1                                 74327758  4 +  97876770 aaa----------------t
i Mus_spretus.CM004110.1                                I 334 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              8286  4 +     98495 ATA----------------T
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4421105  4 -  28371801 ATA----------------T
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     87238  4 -    117718 ATA----------------T
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               964980  4 +   8389877 ATA----------------T
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5016662  4 +   6462685 GTA----------------T
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3462566  4 -   3747815 ATA----------------T
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         7755  4 +     66751 ATA----------------T
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             2629  4 -      8794 ATA----------------T
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL204535.1                           2057002  4 +   2354432 GTA----------------T
i Nannospalax_galili.KL204535.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               4956  4 +     48152 ATA----------------T
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4481843  4 -  14209539 ATA----------------T
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3948583 20 -   4490290 ATAGTTTAGAGTTTATAACT
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  46882  4 +     94413 ATG----------------T
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1223136                          10745  4 -     11253 ATA----------------T
i Nomascus_annamensis.k141_1223136                      C 0 C 0
s Nomascus_concolor.k141_468488                              1388  4 -      1482 ATA----------------T
i Nomascus_concolor.k141_468488                         C 0 C 0
s Nomascus_gabriellae.k141_906566                            1377  4 -      2544 ATA----------------T
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             21851  4 -  18771707 ATA----------------T
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_844529                                  1126  4 +      2124 ATA----------------T
i Nomascus_siki_a.k141_844529                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                27290  4 +   3668941 ACA----------------T
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65564133  4 -  95554990 ATA----------------T
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                             978  4 +      6470 ATA----------------T
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65666502  4 +  89412551 ATA----------------T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4993119  4 -  23139505 ATA----------------T
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Odobenus_rosmarus.KB229369.1                             676500  4 -   3126709 ATA----------------T
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1077287  4 +   1425656 ATA----------------T
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         34448  4 +     78940 ATA----------------T
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  122312  4 +    145789 AAA----------------T
i Ondatra_zibethicus.OndZib_scaffold_6821               I 349 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  34071  4 +     62360 AAA----------------T
i Onychomys_torridus.OnyTor_scaffold_12578              I 345 C 0
s Orcinus_orca.KB316965.1                                 7222270 20 -   7562323 ATAGTTTAGAGTTTATAACT
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              40661  4 -     66828 ATA----------------T
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141872793  4 + 163896628 ATA----------------T
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      304629  4 -    505867 ACA----------------T
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       36143  4 +     38679 ATA----------------T
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18005584  4 -  38779656 ATA----------------T
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134074861  4 - 275406953 ATA----------------T
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      76075  4 +    140051 ATA----------------T
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.AJFE02000950.1                                 724  4 -      1008 ATA----------------T
i Pan_paniscus.AJFE02000950.1                           I 238 n 4
s Pan_troglodytes.KZ622857.1                               324587  4 +    772158 ATA----------------T
i Pan_troglodytes.KZ622857.1                            I 65 I 801
s Panthera_onca.PanOnc_flattened_line_1615                  31313  4 +    295523 ATG----------------T
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3634914  4 +  18214204 ATG----------------T
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5024695  4 -   6340057 ATG----------------T
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1063719  4 -   1292953 ATA----------------T
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188152698  4 - 188283584 ATA----------------T
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            48910  4 +     76494 ATA----------------T
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47510095  4 +  47705337 ATA----------------T
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 64077  4 -    104429 ATA----------------T
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  13863  4 -     29451 ATA----------------T
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                34266  4 +     35859 ATA----------------T
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    112641  4 -    135482 ATG----------------T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           2189  4 -     23713 ATA----------------T
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            21487  4 -     27972 ATA----------------T
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      40091  4 -     45160 CTA----------------T
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4947246  4 -   8017169 AAA----------------T
i Peromyscus_maniculatus.KI615518.1                     I 347 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            118885 20 -    122454 ATAGTTTAGAGTTTATAACT
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           1956  4 -      3310 ATA----------------T
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       21862  4 -     82327 ATA----------------T
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           18614  4 +     19957 ATA----------------T
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26736623  4 +  26888534 ATA----------------T
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            93753  4 +    112873 ATA----------------T
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             40604  4 -     61926 ATA----------------T
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        22033  4 +     78826 ATA----------------T
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              5984  4 -     15800 ATA----------------T
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                         9182  4 -     16101 ATA----------------T
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          2491  4 +      9673 ATA----------------T
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13471485  4 -  19735023 ATA----------------T
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           10393  4 -     31692 ATA----------------T
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           2954 20 +     21690 ATAGTTGAGAGTCTATAACT
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       19830  4 +     44506 ATA----------------T
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        20040  4 +     67491 ATA----------------T
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      10285  4 -     98129 ATA----------------T
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     19886  4 +    147771 ATA----------------T
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        20136  4 -     23762 ATA----------------T
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                           602  4 -     55515 ATA----------------T
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         19955  4 +    152463 ATA----------------T
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      6715  4 +      8943 ATA----------------T
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                          9675  4 +    134592 ATA----------------T
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          20265  4 -     75465 ATA----------------T
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              184150  4 -    373494 ATA----------------T
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19804057  4 +  19899266 ATA----------------T
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               2194  4 -     15069 ATA----------------T
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              2328  4 +     14865 ATA----------------T
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                73496  4 +     78963 GTG----------------T
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6845534  4 +  12164890 ATA----------------T
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     13996  4 -     30946 ata----------------t
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                          679  4 +     11805 ATA----------------T
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           40015  4 +     52369 ATA----------------T
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         32403  4 -     44753 ATA----------------T
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            14324  4 +     27322 ATA----------------T
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       13963  4 -     53241 ATA----------------T
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         36235  4 -     48185 ATA----------------T
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           30674  4 +     77221 aaa----------------t
i Psammomys_obesus.NESX01026517.1                       I 392 C 0
s Pteronotus_parnellii.KE867983.1                            1433  4 -     27784 Ata----------------t
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        242984  4 -    344369 ATA----------------T
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13243557  4 -  17261082 ATA----------------T
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             601510  4 -   3946241 ATA----------------T
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131531277  4 - 161321710 ATG----------------T
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             26319  4 +     56732 ATA----------------T
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6802810  4 +   6970761 ATA----------------T
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             2203  4 +     18040 ATA----------------T
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                13368  4 +     68503 ATA----------------T
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13912652  4 +  90463843 aag----------------T
i Rattus_norvegicus.chr11                               I 317 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1785184  4 +   2252614 ATA----------------T
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           12756  4 -     14454 ATA----------------T
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206374082  4 - 206558726 ATA----------------T
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44851730  4 -  45163003 ATA----------------T
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                16859  4 +    109198 ATG----------------T
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       5153  4 +     12214 ATA----------------T
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15669718  4 -  43202129 ATA----------------T
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        1581  4 +     34089 ATA----------------T
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              1522  4 -     60842 ATA----------------T
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              1617  4 +     67014 ATA----------------T
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              1595  4 +     60816 ATA----------------T
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 1536  4 -     76454 ATA----------------T
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17338047  4 -  30362882 ATA----------------T
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         17646  4 -     62485 ATA----------------T
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   28922  4 -    114521 ATA----------------T
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1527475                       24744  4 +     26421 ATA----------------T
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       5204  4 +     20762 ATA----------------T
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         38939  4 +     40653 ATA----------------T
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                            9496  4 -     12194 ATA----------------T
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     22918  4 -     27512 ATA----------------T
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         31937  4 -     33692 ATA----------------C
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   96859  4 -    120886 AAA----------------T
i Sigmodon_hispidus.SigHis_scaffold_11332               I 343 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            15575  4 +    739146 ATA----------------C
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17747794  4 -  27805282 Ata----------------t
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2237088  4 +   2842873 ATA----------------C
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             231966  4 -    276980 ATA----------------T
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            24529  4 +     62062 ATG----------------T
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189269431  4 + 218635234 ATA----------------T
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                     13898910  4 +  13920577 ATA----------------T
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               3380  4 -      6213 ATA----------------T
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               12303  4 +     45698 ATA----------------T
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      804300  4 +   1148477 ATA----------------T
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  54961  4 +     99546 ATA----------------T
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               23623  4 +     42269 ATA----------------T
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               56939  4 +     65473 ATA----------------T
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194004234  4 - 194193292 ATA----------------T
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  1184  4 +      6782 ATA----------------T
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  133441  4 -    259118 ATA----------------G
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        23314  4 +     38948 ATA----------------T
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   17041  4 -     32910 ATA----------------T
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       22939  4 +     24652 ATA----------------T
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      1817  4 -      3559 ATA----------------T
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           39763  4 -     54611 ATA----------------T
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       15762  4 +     17312 ATA----------------T
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    23125  4 -     25040 ATA----------------T
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          1791  4 +      3528 ATA----------------T
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  48153  4 +     51589 ATA----------------T
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       11329  4 +     14732 ATA----------------T
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       1806  4 -     28054 ATA----------------T
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44656601  4 -  44834318 ATA----------------T
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        1611  4 +      3372 ATA----------------T
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   2779  4 +     90398 ATA----------------C
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16078885  4 +  31416278 ata----------------t
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2788737  4 -   3938065 ATC----------------a
i Tupaia_chinensis.KB320831.1                           C 0 I 279
s Tupaia_tana.TupTan_flattened_line_68454                    1264  4 +     13056 ATC----------------A
i Tupaia_tana.TupTan_flattened_line_68454               C 0 I 260
s Tursiops_truncatus.MRVK01000923.1                      69310988 20 -  96451834 ATAGTTTGGAGTTTATAACT
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 24126  4 -     25548 ATA----------------T
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6511545  4 +  28682327 ATA----------------G
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  2373  4 -     20643 ATA----------------T
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             21917  4 -     33872 ATA----------------T
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1522231  4 -   2331223 Tta----------------t
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                134698  4 -    281493 ACA----------------T
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       124187  4 -    134049 ATA----------------C
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        211225  4 -    227762 ATA----------------T
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     12404  4 -     20485 GAT----------------A
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           4490 20 -      8775 ATAGTTTAGAGTTTATAACT
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Bos_taurus.CM000177.6                                 136292828  0 - 158972876 C
e Bos_mutus.JH883513.1                                     569472  8 -    998990 I
e Bos_indicus.CM003021.1                                138137095  0 - 161108492 C
e Bison_bison.KN264915.1                                  6556860  0 +   6870073 C
e Antilocapra_americana.AntAmePen_scaffold_42841            28309  0 +     33004 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16291  1 -    119109 I
e Octodon_degus.JH651621.1                                3678743 1836 +  10294119 I
e Heterocephalus_glaber.JH602058.1                        2548028 229 +  31725842 I
e Fukomys_damarensis.KN123630.1                          13889876  0 -  19261668 C
e Dolichotis_patagonum.DolPat_scaffold_14102                33375  0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             56104 16 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                14631 16 +     26546 I
e Ctenodactylus_gundi.CteGun_scaffold_447                  205376  0 -    956709 C
e Cavia_tschudii.CavTsc_scaffold_488                       173989  0 +    436027 C
e Cavia_porcellus.DS562889.1                             15795798  0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15783848 16 -  24422027 I

a score=0.000000
s hg38.chr4_GL000008v2_random                                8865 1 +    209709 C
s Acinonyx_jubatus.LLWD01000356.1                         2030941 1 +   3721120 C
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    109549 1 -    189883 C
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10654276 1 +  23371972 C
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7090996 1 -  16596857 c
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                    9959 1 -     22067 A
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_3103707                  59878 1 +     61638 C
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        51686 1 +     53391 C
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         2411 1 +     72529 C
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          1986 1 +      3797 C
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             7175 1 -     18050 C
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  8286 1 -     11521 C
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              7852 1 -     21359 C
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1856473                                6229 1 +      7227 C
i Alouatta_juara.k141_1856473                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          7143 1 -     10438 C
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            3799 1 +      7047 C
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             7085 1 +     10410 C
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                             888 1 -      4927 C
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             3816 1 +      6429 C
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3517697 1 +   4113121 C
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      387890 1 -    631301 C
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Aotus_azarae.k141_3170768                                 59534 1 +     78111 C
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            2461 1 +     22701 C
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5746419 1 +   9889416 C
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             3004 1 -    104377 C
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               3010 1 +     23246 C
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     1043 1 +      5067 C
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      14997 1 +     17483 C
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 6282 1 -     29036 C
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9536276 1 +  39197703 C
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             57560 1 +     85812 C
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 8559 1 +     89302 C
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             13069 1 -     58268 C
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             61055 1 +    119057 C
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               3006 1 -     25888 C
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 3756 1 -     16375 C
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                                76 1 +      2719 C
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26377724 1 +  51448160 C
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        2955 1 -     13118 C
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   40798 1 -     72089 C
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bubalus_bubalis.KI419065.1                              1228530 1 -   1914593 C
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               110895 1 -    171031 C
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                  9921 1 +    125063 C
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                11969 1 -    216513 C
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        4509 1 -    134917 C
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3217157 1 -   8989139 C
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           394861 1 -  15254737 C
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2970595 1 +   6889770 C
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11515655 1 +  39901454 C
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   10673 1 +     87036 C
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11262316 1 -  35597290 C
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11084845 1 +  39895921 C
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16451869 1 -  44759192 C
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21322804 1 + 157394656 C
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135704031 1 - 157403528 C
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_647363                  1553 1 +      1887 C
i Capromys_pilorides.CapPil_scaffold_647363             C 0 C 0
s Carlito_syrichta.NW_007248099.1                          306146 1 +    345090 C
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               57074 1 +     67245 C
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   27562 1 +     33760 C
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   156367 1 -    276539 C
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18887747 1 -  29618158 C
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 5291 1 -     26817 C
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                 9534 1 +     25043 C
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         5183 1 +     21754 C
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4360865 1 +   7569818 c
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623          620 1 -      9338 C
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6551670 1 +   6739814 C
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      53147 1 -     54931 C
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         18131 1 -     19697 C
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         55662 1 -    107033 C
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        2107 1 -      3853 C
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          26040 1 +     30494 C
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           2064 1 -      4022 C
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          1957 1 -      3505 C
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           20747 1 +     35983 C
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11987283 1 +  12117833 C
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46474036 1 +  46592721 C
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      31863 1 +     33420 C
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        1899 1 -      3443 C
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      2890 1 -      4669 C
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        2690 1 -      4411 C
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         2215 1 -      4205 C
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_1070855           429 1 -      1715 C
i Chaetophractus_vellerosus.ChaVel_scaffold_1070855     C 0 C 0
s Cheirogaleus_major.k141_1157592                           56062 1 -     68416 T
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            5108 1 +     13308 T
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             2569 1 -     18223 C
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             19592 1 +     25473 C
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           38631 1 +     57117 C
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          43306 1 +     54541 C
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15958914 1 +  43084221 c
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         68116 1 +    196370 C
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          12297 1 +     40510 C
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15135497 1 -  15256731 C
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      30543 1 -     53260 C
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101140992 1 + 101219884 C
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                14041 1 -     21363 C
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           759347 1 +    964067 C
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_141308              6142 1 -     12508 C
i Chrysochloris_asiatica.ChrAsi_scaffold_141308         C 0 C 0
s Colobus_angolensis.KN985967.1                          10879571 1 +  10971483 C
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147660729 1 + 156195979 C
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            12716 1 +     23629 C
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60610332 1 +  78930452 C
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         36781 1 -     40477 C
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 274646 1 -    399297 C
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53026179 1 +  72327488 c
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             17086 1 -     19186 C
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            48966 1 -     70449 C
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 27686 1 -     67205 C
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          179244 1 -   6883506 c
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16841929 1 +  31942871 C
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80034408 1 -  96802777 C
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18696387 1 -  18957592 C
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 319526 1 +    993696 C
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_170113                  785 1 +       818 C
i Diceros_bicornis.DicBicMic_scaffold_170113            C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   154805 1 +    228994 C
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3652544 1 +   4240102 C
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 24099 1 +     28912 C
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Echinops_telfairi.JH980316.1                           22991635 1 -  44670279 C
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                  9764 1 +     24177 G
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1489058 1 +   1727528 C
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7803818 1 +  15467074 c
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        236836 1 -    369425 C
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           3851 1 -      7838 C
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85868726 1 +  99434291 C
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Equus_asinus.JREZ01000062.1                             5850246 1 -   7175178 c
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13348748 1 +  41866177 c
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          10238 1 +     92910 c
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11529834 1 +  16010500 T
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48767675 1 -  48907691 C
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          312610 1 +    330699 C
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             59040 1 +     89355 C
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              2109 1 +     13586 C
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               2044 1 -      6809 C
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             8517 1 +     36558 C
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             4833 1 +     60246 C
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 8321 1 +    109717 C
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               12695 1 +     16540 C
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                12971 1 +     27497 C
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           15433 1 +     26808 C
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                30161 1 +     46535 C
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              12884 1 -     29447 C
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129889918 1 - 159252932 C
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129276993 1 - 158578461 C
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 18127 1 +     52776 C
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13889876 1 -  19261668 c
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     208056 1 -    847004 C
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           10437 1 -     43889 C
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           7508 1 +     27357 C
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               153384 1 +    324696 C
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    178579 1 -    189561 A
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                            9787 1 -     18683 C
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               2264 1 -     14630 C
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119649363 1 - 195582420 C
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   74333 1 +    118900 C
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                         2679 1 +      3980 C
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             25154 1 +     26611 C
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             2615 1 +     56096 C
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        25890 1 -     42470 C
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        42485 1 -     54384 C
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              14174 1 +     53719 C
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                25063 1 -     91191 C
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2548257 1 +  31725842 C
i Heterocephalus_glaber.JH602058.1                      I 229 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               53636 1 +     73687 T
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              144642 1 +    277961 C
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      276089 1 -    477199 C
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              5248 1 -      9143 C
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                       154 1 -   7690867 C
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 13241 1 -     67322 C
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hylobates_abbotti.k141_493872                              2081 1 +      5897 C
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_282275                               1293 1 +      1846 C
i Hylobates_agilis.k141_282275                          C 0 C 0
s Hylobates_klossii.k141_584463                               457 1 -      1009 C
i Hylobates_klossii.k141_584463                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14621626 1 -  25970782 C
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1133650                            1515 1 -      2775 C
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             30118 1 -     60944 C
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     3287 1 +     22540 T
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7123172 1 +  13083262 C
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_1884019                                    350 1 -      2196 C
i Indri_indri.k141_1884019                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               6396 1 +     17520 C
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8562679 1 +  11848649 a
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               21228 1 +     37189 C
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          47130 1 -    147782 C
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   111149 1 -    115756 T
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258404163 1 - 285822530 C
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        21056 1 +     39228 C
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            50429 1 +     63517 C
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        75650 1 +    116806 C
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     28694 1 -     33031 C
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3082944 1 -   3498232 C
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    10148 1 +     22452 C
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            133565 1 +   3060487 C
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19244758 1 +  19376315 C
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            7808 1 +     84689 C
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3775559 1 +   6799190 C
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20588414 1 -  62548349 c
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11084301 1 +  39895028 C
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             16445 1 +     74745 C
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12702951 1 +  12821369 C
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               5047 1 +      6569 C
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           43349 1 +     63263 C
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_1068107                               11925 1 +     12679 C
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                1498 1 +      3017 C
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  43110 1 -     79256 C
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196032028 1 + 196197964 C
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11442134 1 +  11645122 C
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   2057 1 -     46448 C
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                1888 1 -      3617 C
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 12220 1 -     55006 C
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43837257 1 +  43892939 C
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                4479 1 -      5978 C
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               2062 1 -     27140 C
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43433918 1 -  43563597 C
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4446744 1 -   4543643 C
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            143678 1 +    252755 C
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             33752 1 +     58827 C
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36871016 1 +  64221397 C
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       61835 1 -    234502 C
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_1828            226217 1 -    226874 C
i Mellivora_capensis.MelCap_flattened_line_1828         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233                9139 1 +     15977 C
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1043920 1 -  26018355 c
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_183284                   1268 1 +      2166 C
i Mesoplodon_bidens.MesBid_scaffold_183284              C 0 C 0
s Microcebus_murinus.CM007691.1                          16507282 1 +  47401472 C
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  28583 1 -     48017 C
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               20234 1 -     32043 C
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22817037 1 -  98408828 C
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8207007 1 +  10048721 c
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            31678 1 +     45743 C
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        32577 1 +     34273 C
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         8248 1 -    104932 C
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     2687 1 +      8497 C
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 143992 1 +    154973 C
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                158772 1 +    265003 C
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 2164 1 -      4346 C
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  141869 1 -    168139 C
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          16657 1 -    100666 C
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70763525 1 +  92629107 c
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75486589 1 +  98207768 c
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67552749 1 +  89017189 c
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74327762 1 +  97876770 c
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              8290 1 +     98495 C
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4421109 1 -  28371801 C
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     87242 1 -    117718 C
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               964984 1 +   8389877 C
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5016666 1 +   6462685 C
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3462570 1 -   3747815 C
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         7759 1 +     66751 C
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             2633 1 -      8794 T
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL204535.1                           2057006 1 +   2354432 C
i Nannospalax_galili.KL204535.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               4960 1 +     48152 C
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4481847 1 -  14209539 C
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3948603 1 -   4490290 C
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  46886 1 +     94413 G
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1223136                          10749 1 -     11253 C
i Nomascus_annamensis.k141_1223136                      C 0 C 0
s Nomascus_concolor.k141_468488                              1392 1 -      1482 C
i Nomascus_concolor.k141_468488                         C 0 C 0
s Nomascus_gabriellae.k141_906566                            1381 1 -      2544 C
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             21855 1 -  18771707 C
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_844529                                  1130 1 +      2124 C
i Nomascus_siki_a.k141_844529                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                27294 1 +   3668941 C
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65564137 1 -  95554990 C
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                             982 1 +      6470 C
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65666506 1 +  89412551 C
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4993123 1 -  23139505 C
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Odobenus_rosmarus.KB229369.1                             676504 1 -   3126709 C
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1077291 1 +   1425656 C
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         34452 1 +     78940 A
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  122316 1 +    145789 C
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  34075 1 +     62360 C
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7222290 1 -   7562323 C
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              40665 1 -     66828 C
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141872797 1 + 163896628 C
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      304633 1 -    505867 C
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       36147 1 +     38679 C
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18005588 1 -  38779656 C
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134074865 1 - 275406953 C
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      76079 1 +    140051 C
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127571608 1 - 205426864 C
i Pan_paniscus.CM003386.1                               I 4 C 0
s Pan_troglodytes.CM009241.2                            120148761 1 - 196562556 C
i Pan_troglodytes.CM009241.2                            I 4 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  31317 1 +    295523 C
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3634918 1 +  18214204 C
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5024699 1 -   6340057 C
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1063723 1 -   1292953 C
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188152702 1 - 188283584 C
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            48914 1 +     76494 C
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47510099 1 +  47705337 C
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 64081 1 -    104429 C
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  13867 1 -     29451 C
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                34270 1 +     35859 C
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    112645 1 -    135482 C
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           2193 1 -     23713 C
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            21491 1 -     27972 C
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      40095 1 -     45160 G
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4947250 1 -   8017169 C
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            118905 1 -    122454 C
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           1960 1 -      3310 C
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       21866 1 -     82327 C
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           18618 1 +     19957 C
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26736627 1 +  26888534 C
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            93757 1 +    112873 C
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             40608 1 -     61926 C
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        22037 1 +     78826 C
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              5988 1 -     15800 C
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                         9186 1 -     16101 C
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          2495 1 +      9673 C
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13471489 1 -  19735023 C
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           10397 1 -     31692 C
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           2974 1 +     21690 C
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       19834 1 +     44506 C
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        20044 1 +     67491 C
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      10289 1 -     98129 C
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     19890 1 +    147771 C
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        20140 1 -     23762 C
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                           606 1 -     55515 C
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         19959 1 +    152463 C
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      6719 1 +      8943 C
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                          9679 1 +    134592 C
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          20269 1 -     75465 C
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              184154 1 -    373494 C
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19804061 1 +  19899266 C
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               2198 1 -     15069 C
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              2332 1 +     14865 C
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                73500 1 +     78963 T
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6845538 1 +  12164890 C
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     14000 1 -     30946 c
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                          683 1 +     11805 C
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           40019 1 +     52369 C
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         32407 1 -     44753 C
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            14328 1 +     27322 C
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       13967 1 -     53241 C
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         36239 1 -     48185 C
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           30678 1 +     77221 c
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            1437 1 -     27784 c
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        242988 1 -    344369 C
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 I 214
s Pteropus_alecto.KB031157.1                             13243561 1 -  17261082 G
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             601514 1 -   3946241 G
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131531281 1 - 161321710 C
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             26323 1 +     56732 C
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6802814 1 +   6970761 C
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             2207 1 +     18040 C
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                13372 1 +     68503 C
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13912656 1 +  90463843 C
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1785188 1 +   2252614 C
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           12760 1 -     14454 C
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206374086 1 - 206558726 C
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44851734 1 -  45163003 C
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                16863 1 +    109198 G
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       5157 1 +     12214 C
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15669722 1 -  43202129 C
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        1585 1 +     34089 C
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              1526 1 -     60842 C
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              1621 1 +     67014 C
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              1599 1 +     60816 C
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 1540 1 -     76454 C
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17338051 1 -  30362882 C
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         17650 1 -     62485 C
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   28926 1 -    114521 C
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1527475                       24748 1 +     26421 C
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       5208 1 +     20762 C
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         38943 1 +     40653 C
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                            9500 1 -     12194 C
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     22922 1 -     27512 C
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         31941 1 -     33692 C
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   96863 1 -    120886 C
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            15579 1 +    739146 C
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17747798 1 -  27805282 c
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2237092 1 +   2842873 C
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             231970 1 -    276980 C
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            24533 1 +     62062 C
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189269435 1 + 218635234 C
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                     13898914 1 +  13920577 C
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               3384 1 -      6213 A
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               12307 1 +     45698 T
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      804304 1 +   1148477 C
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  54965 1 +     99546 C
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               23627 1 +     42269 C
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               56943 1 +     65473 C
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194004238 1 - 194193292 C
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  1188 1 +      6782 C
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  133445 1 -    259118 C
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        23318 1 +     38948 C
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   17045 1 -     32910 C
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       22943 1 +     24652 C
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      1821 1 -      3559 C
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           39767 1 -     54611 C
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       15766 1 +     17312 C
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    23129 1 -     25040 C
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          1795 1 +      3528 C
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  48157 1 +     51589 C
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       11333 1 +     14732 C
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       1810 1 -     28054 C
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44656605 1 -  44834318 C
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        1615 1 +      3372 C
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   2783 1 +     90398 C
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16078889 1 +  31416278 c
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2789020 1 -   3938065 t
i Tupaia_chinensis.KB320831.1                           I 279 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    1528 1 +     13056 T
i Tupaia_tana.TupTan_flattened_line_68454               I 260 C 0
s Tursiops_truncatus.MRVK01000923.1                      69311008 1 -  96451834 C
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 24130 1 -     25548 C
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6511549 1 +  28682327 C
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  2377 1 -     20643 C
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             21921 1 -     33872 C
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1522235 1 -   2331223 c
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                134702 1 -    281493 C
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       124191 1 -    134049 C
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        211229 1 -    227762 C
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     12408 1 -     20485 A
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           4510 1 -      8775 C
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Bos_taurus.CM000177.6                                 136292828 0 - 158972876 C
e Bos_mutus.JH883513.1                                     569472 8 -    998990 I
e Bos_indicus.CM003021.1                                138137095 0 - 161108492 C
e Bison_bison.KN264915.1                                  6556860 0 +   6870073 C
e Antilocapra_americana.AntAmePen_scaffold_42841            28309 0 +     33004 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16291 1 -    119109 I
e Octodon_degus.JH651621.1                                3678743 1836 +  10294119 I
e Dolichotis_patagonum.DolPat_scaffold_14102                33375 0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             56104 16 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                14631 16 +     26546 I
e Ctenodactylus_gundi.CteGun_scaffold_447                  205376 0 -    956709 C
e Cavia_tschudii.CavTsc_scaffold_488                       173989 0 +    436027 C
e Cavia_porcellus.DS562889.1                             15795798 0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15783848 16 -  24422027 I

a score=0.000000
s hg38.chr4_GL000008v2_random                                8866  8 +    209709 AAA-----------GTCA-A
s Acinonyx_jubatus.LLWD01000356.1                         2030942  8 +   3721120 AAA-----------GTTA-A
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    109550  8 -    189883 AAG-----------GTCA-A
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 I 4
s Ailuropoda_melanoleuca.LNAT01000321.1                  10654277  8 +  23371972 AAc-----------gtta-a
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7090997  8 -  16596857 aaa-----------gtta-a
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                    9960  9 -     22067 TAA-----------GTCACA
i Allactaga_bullata.AllBul_scaffold_70162               C 0 I 7
s Allenopithecus_nigroviridis.k141_3103707                  59879  8 +     61638 AAA-----------GTCA-A
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        51687  8 +     53391 AAA-----------GTCA-A
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         2412  8 +     72529 AAA-----------GTCA-A
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          1987  8 +      3797 AAA-----------GTCA-A
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             7176  8 -     18050 AAA-----------GTCA-A
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  8287  8 -     11521 AAA-----------GTCA-C
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              7853  8 -     21359 AAA-----------GTCA-A
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1856473                                6230  8 +      7227 AAA-----------GTCA-A
i Alouatta_juara.k141_1856473                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          7144  8 -     10438 AAA-----------GTCA-C
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            3800  8 +      7047 AAA-----------GTCA-A
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             7086  8 +     10410 AAA-----------GTCA-A
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                             889  8 -      4927 AAA-----------GTCA-A
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             3817  8 +      6429 AAA-----------GTCA-A
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3517698  8 +   4113121 AAA-----------GTTg-t
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      387891  8 -    631301 AAA-----------GTTA-A
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 I 1
s Antilocapra_americana.AntAmePen_scaffold_42841            28309  7 +     33004 -AA-----------GTTA-T
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 59535  8 +     78111 AAA-----------GTCA-A
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            2462  8 +     22701 AAA-----------GTCA-A
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5746420  8 +   9889416 AAA-----------GTCA-A
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             3005  8 -    104377 AAA-----------GTCA-A
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               3011  8 +     23246 AAC-----------GTCA-A
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     1044  3 +      5067 AAG-----------------
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      14998  8 +     17483 AAA-----------GTCA-A
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 6283  8 -     29036 AAA-----------GTTA-A
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 I 1
s Ateles_geoffroyi_b.tarseq_2582                             9536277  8 +  39197703 AAA-----------GTCA-A
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             57561  8 +     85812 AAA-----------GTCA-A
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 8560  8 +     89302 AAA-----------GTCA-A
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             13070  8 -     58268 AAA-----------GTCA-A
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             61056  8 +    119057 AAA-----------GTCA-A
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               3007  8 -     25888 AAA-----------GTCA-A
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 3757  8 -     16375 TGA-----------GTCA-A
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                                77  8 +      2719 TGA-----------GTCA-A
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26377725  8 +  51448160 AAA-----------Gtta-t
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        2956  8 -     13118 AAA-----------GTta-t
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   40799  8 -     72089 AGA-----------GTTA-T
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bubalus_bubalis.KI419065.1                              1228531  8 -   1914593 AAA-----------GTTA-T
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               110896  8 -    171031 GAA-----------GTCA-A
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                  9922  8 +    125063 GAA-----------GTCA-A
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                11970  8 -    216513 GAA-----------GTCA-A
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        4510  8 -    134917 GAA-----------GTCA-A
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3217158  8 -   8989139 AAA-----------GTTA-A
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           394862  8 -  15254737 AAT-----------GTTA-A
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2970596  8 +   6889770 AAA-----------GTTA-A
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11515656  8 +  39901454 CAA-----------GTTA-A
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   10674  8 +     87036 CAA-----------GTTA-A
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11262317  8 -  35597290 Caa-----------gtta-a
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11084846  8 +  39895921 Caa-----------gtta-a
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16451870  8 -  44759192 Caa-----------gtta-a
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21322805  8 + 157394656 AAA-----------GTTA-T
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135704032  8 - 157403528 AAA-----------GTTA-T
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_647363                  1554  8 +      1887 AAA-----------GTCA-A
i Capromys_pilorides.CapPil_scaffold_647363             C 0 I 28
s Carlito_syrichta.NW_007248099.1                          306147  8 +    345090 AAA-----------GTCA-A
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               57075  8 +     67245 AAA-----------GTTA-A
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 I 1
s Castor_canadensis.CasCan_scaffold_47037                   27563  9 +     33760 AGA-----------GTCAAA
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   156368  8 -    276539 AAA-----------GTTA-A
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18887748  8 -  29618158 AAA-----------GTCA-A
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 5292  8 -     26817 AAA-----------GTCA-A
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                 9535  8 +     25043 AAA-----------GTCA-A
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         5184  8 +     21754 AAA-----------GTCA-A
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4360866  8 +   7569818 aaa-----------gtta-a
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623          621  8 -      9338 AAA-----------GTTA-A
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6551671  8 +   6739814 AAA-----------GTCA-A
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      53148  8 -     54931 AAA-----------GTCA-A
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         18132  8 -     19697 AAA-----------GTCA-A
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         55663  8 -    107033 AAA-----------GTCA-A
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        2108  8 -      3853 AAA-----------GTCA-A
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          26041  8 +     30494 AAA-----------GTCA-A
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           2065  8 -      4022 AAA-----------GTCA-A
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          1958  8 -      3505 AAA-----------GTCA-A
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           20748  8 +     35983 AAA-----------GTCA-A
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11987284  8 +  12117833 AAA-----------GTCA-A
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46474037  8 +  46592721 AAA-----------GTCA-A
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      31864  8 +     33420 AAA-----------GTCA-A
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        1900  8 -      3443 AAA-----------GTCA-A
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      2891  8 -      4669 AAA-----------GTCA-A
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        2691  8 -      4411 AAA-----------GTCA-A
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         2216  8 -      4205 AAA-----------GTCA-A
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_1070855           430  8 -      1715 AAA-----------GTAA-A
i Chaetophractus_vellerosus.ChaVel_scaffold_1070855     C 0 C 0
s Cheirogaleus_major.k141_1157592                           56063  8 -     68416 GAA-----------GTCA-A
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            5109  8 +     13308 GAA-----------GTCA-A
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             2570  8 -     18223 AAA-----------GTCA-A
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             19593  8 +     25473 AAA-----------GTCA-A
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           38632  8 +     57117 AAA-----------GTCA-A
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          43307  8 +     54541 AAA-----------GTCA-A
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15958915  8 +  43084221 aaa-----------gtca-a
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         68117  8 +    196370 AAA-----------GTCA-A
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          12298  8 +     40510 AAA-----------GTCA-A
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15135498  8 -  15256731 AAA-----------GTCA-A
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      30544  8 -     53260 AAA-----------GTCA-A
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101140993  8 + 101219884 AAA-----------GTCA-A
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                14042  8 -     21363 AAA-----------GTCA-A
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           759348  8 +    964067 AAa-----------gtca-a
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_141308              6143  8 -     12508 AAA-----------TTAA-A
i Chrysochloris_asiatica.ChrAsi_scaffold_141308         C 0 C 0
s Colobus_angolensis.KN985967.1                          10879572  8 +  10971483 AAA-----------GTCA-A
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147660730  8 + 156195979 AAA-----------GTCA-A
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            12717  8 +     23629 AAA-----------GTCA-A
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60610333  8 +  78930452 Caa-----------atca-a
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         36782  8 -     40477 AAC-----------GTTA-A
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 I 2
s Cricetomys_gambianus.CriGam_scaffold_949                 274647  8 -    399297 AAG-----------GTCA-A
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 I 4
s Cricetulus_griseus.LT883672.1                          53026180  8 +  72327488 aag-----------gtca-A
i Cricetulus_griseus.LT883672.1                         C 0 I 4
s Crocidura_indochinensis.CroInd_scaffold_38409             17087  7 -     19186 AAG------------TGA-A
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 I 5
s Cryptoprocta_ferox.CryFer_flattened_line_19014            48967  8 -     70449 AAA-----------GTTA-A
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 27687  8 -     67205 AAA-----------GTCA-A
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 I 28
s Dasypus_novemcinctus.JH568778.1                          179245  8 -   6883506 aaa-----------gtta-a
i Dasypus_novemcinctus.JH568778.1                       C 0 I 9
s Daubentonia_madagascariensis.ctg11                     16841930  8 +  31942871 CAA-----------GTCA-A
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80034409  8 -  96802777 AAA-----------GTta-t
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18696388  8 -  18957592 AAa-----------gtta-a
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 319527  8 +    993696 AAA-----------gtta-a
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_170113                  786  8 +       818 TAA-----------GTTA-A
i Diceros_bicornis.DicBicMic_scaffold_170113            C 0 N 0
s Dinomys_branickii.DinBra_scaffold_1996                   154806  8 +    228994 AAA-----------GTCA-A
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3652545  9 +   4240102 AAA-----------GTCAAA
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 24100  9 +     28912 AAA-----------GTCAAA
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Echinops_telfairi.JH980316.1                           22991636  8 -  44670279 AAA-----------CTAA-A
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                  9765  8 +     24177 GAA-----------TTTA-A
i Eidolon_helvum.KE772537.1                             C 0 I 114
s Elaphurus_davidianus.JRFZ01086400.1                     1489059  8 +   1727528 AAA-----------GTta-t
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7803819  8 +  15467074 aaa-----------gtaa-a
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        236837  8 -    369425 AAG-----------GTCA-A
i Ellobius_lutescens.LOEQ01003611.1                     C 0 I 4
s Ellobius_talpinus.LOJH01090055.1                           3852  8 -      7838 AAG-----------GTCA-A
i Ellobius_talpinus.LOJH01090055.1                      C 0 I 4
s Enhydra_lutris.KZ291749.1                              85868727  8 +  99434291 AAA-----------GTTA-A
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Equus_asinus.JREZ01000062.1                             5850247  8 -   7175178 aaa-----------gtta-a
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13348749  8 +  41866177 aaa-----------gtta-a
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          10239  8 +     92910 aaa-----------gtta-a
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11529835  8 +  16010500 GAa-----------gtca-a
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48767676  8 -  48907691 AAA-----------GTCA-A
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          312611  8 +    330699 AAA-----------GTTA-T
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             59041  8 +     89355 AAA-----------GTTA-T
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              2110  8 +     13586 CAA-----------GTCA-A
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               2045  8 -      6809 CAA-----------GTCA-A
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             8518  8 +     36558 CAA-----------GTCA-A
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             4834  8 +     60246 CAA-----------GTCA-A
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 8322  8 +    109717 CAA-----------GTCA-A
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               12696  8 +     16540 CAA-----------GTCA-A
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                12972  8 +     27497 CAA-----------GTCA-A
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           15434  8 +     26808 CAA-----------GTCA-A
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                30162  8 +     46535 CAA-----------GTCA-A
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              12885  8 -     29447 CAA-----------GTCA-A
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129889919  8 - 159252932 AAA-----------GTTA-A
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129276994  8 - 158578461 AAA-----------GTTA-A
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 18128  8 +     52776 AAA-----------GTTA-A
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13889877  8 -  19261668 aaa-----------gtta-a
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     208057  8 -    847004 AAA-----------GTCA-A
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           10438  8 -     43889 AAA-----------GTCA-A
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           7509  8 +     27357 AAA-----------GTCA-A
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               153385  8 +    324696 AAA-----------CTTA-A
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    178580  8 -    189561 AAA-----------GTTA-T
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                            9788  8 -     18683 AAA-----------GTTG-A
i Glis_glis.GliGli_scaffold_79770                       C 0 I 1
s Gorilla_beringei.k141_111300                               2265  8 -     14630 AAA-----------GTCA-A
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119649364  8 - 195582420 AAA-----------GTCA-A
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   74334  8 +    118900 GAA-----------GTTG-A
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 I 1
s Hapalemur_alaotrensis.k141_1198205                         2680  8 +      3980 TGA-----------GTCA-A
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             25155  8 +     26611 TGA-----------GTCA-A
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             2616  8 +     56096 TGA-----------GTCA-A
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        25891  8 -     42470 TGA-----------GTCA-A
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        42486  8 -     54384 TGA-----------GTCA-A
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              14175  8 +     53719 AAA-----------GTTA-A
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                25064  8 -     91191 AAA-----------GTTA-T
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2548258  8 +  31725842 AAA-----------GTCA-a
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               53637  8 +     73687 AGT-----------GTAA-A
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              144643  8 +    277961 AAA-----------GTTA-T
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      276090  8 -    477199 AAA-----------GTTA-A
i Hipposideros_armiger.JXIK01001085.1                   C 0 I 10
s Hipposideros_galeritus.HipGal_scaffold_104691              5249  8 -      9143 AAA-----------GTTA-A
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 I 10
s Hoolock_leuconedys.ctg79                                       155  8 -   7690867 AAA-----------GTCA-A
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 13242  8 -     67322 AAA-----------GCTG-A
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hylobates_abbotti.k141_493872                              2082  8 +      5897 AAA-----------GTCA-A
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_282275                               1294  8 +      1846 AAA-----------GTCA-A
i Hylobates_agilis.k141_282275                          C 0 I 102
s Hylobates_klossii.k141_584463                               458  8 -      1009 AAA-----------GTCA-A
i Hylobates_klossii.k141_584463                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14621627  8 -  25970782 AAA-----------GTCA-A
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1133650                            1516  8 -      2775 AAA-----------GTCA-A
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             30119  8 -     60944 AAA-----------GTCA-A
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     3288  8 +     22540 AAA-----------ATCA-A
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7123173  8 +  13083262 AAA-----------GTCA-A
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 I 9
s Indri_indri.k141_1884019                                    351  8 -      2196 CCA-----------GTCA-A
i Indri_indri.k141_1884019                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               6397  8 +     17520 AAA-----------GTTA-T
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8562680  9 +  11848649 taA-----------GTCACA
i Jaculus_jaculus.JH725517.1                            C 0 I 9
s Kogia_breviceps.KogBre_flattened_line_35920               21229  8 +     37189 AAA-----------GTTA-T
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          47131  8 -    147782 AAA-----------GTCA-A
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   111150  8 -    115756 ACA-----------GTTA-A
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258404164  8 - 285822530 CGA-----------GTCA-A
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        21057  8 +     39228 TAA-----------GCCA-A
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            50430  8 +     63517 TAA-----------CTCA-A
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        75651  8 +    116806 TAA-----------GTCA-A
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     28695  8 -     33031 TAA-----------GCCA-A
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3082945  8 -   3498232 AGc-----------gtta-a
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    10149  8 +     22452 CAA-----------GTCA-A
i Lepus_americanus.LepAme_scaffold_62849                C 0 I 29
s Lipotes_vexillifer.KE558548.1                            133566  8 +   3060487 GAA-----------GTta-t
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19244759  8 +  19376315 AAA-----------GTCA-A
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            7809  8 +     84689 AAA-----------GTCA-A
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3775560  8 +   6799190 AAA-----------GTCA-A
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20588415  8 -  62548349 aaa-----------gtaa-a
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11084302  8 +  39895028 Caa-----------gtta-a
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             16446  8 +     74745 AAA-----------GTCA-A
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12702952  8 +  12821369 AAA-----------GTCA-A
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               5048  8 +      6569 AAA-----------GTCA-A
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           43350  8 +     63263 AAA-----------GTCA-A
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_1068107                               11926  8 +     12679 AAA-----------GTCA-A
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                1499  8 +      3017 AAA-----------GTCA-A
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  43111  8 -     79256 AAA-----------GTCA-A
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196032029  8 + 196197964 AAA-----------GTCA-A
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11442135  8 +  11645122 AAA-----------GTCA-A
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   2058  8 -     46448 AAA-----------GTCA-A
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                1889  8 -      3617 AAA-----------GTCA-A
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 12221  8 -     55006 AAA-----------GTCA-A
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43837258  8 +  43892939 AAA-----------GTCA-A
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                4480  8 -      5978 AAA-----------GTCA-A
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               2063  8 -     27140 AAA-----------GTCA-A
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43433919  8 -  43563597 AAA-----------GTCA-A
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4446745  8 -   4543643 AAA-----------GTCA-A
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            143679  8 +    252755 AAA-----------Gtta-a
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             33753  8 +     58827 AAA-----------Gtta-a
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36871017  8 +  64221397 AAA-----------GTCA-A
i Marmota_marmota.CZRN01000005.1                        C 0 I 7
s Megaderma_lyra.MegLyr_scaffold_3562                       61836  8 -    234502 GAA-----------CTTG-A
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 I 1
s Mellivora_capensis.MelCap_flattened_line_1828            226218  8 -    226874 AAA-----------GTTA-A
i Mellivora_capensis.MelCap_flattened_line_1828         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233                9140  8 +     15977 AAG-----------GTCA-A
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 I 4
s Mesocricetus_auratus.KB708139.1                         1043921  8 -  26018355 aag-----------gtcA-A
i Mesocricetus_auratus.KB708139.1                       C 0 I 4
s Mesoplodon_bidens.MesBid_scaffold_183284                   1269  5 +      2166 AAA-----------G----T
i Mesoplodon_bidens.MesBid_scaffold_183284              C 0 C 0
s Microcebus_murinus.CM007691.1                          16507283  8 +  47401472 CAA-----------GTCA-A
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  28584  8 -     48017 AAA-----------CTAA-A
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               20235  8 -     32043 AAA-----------GTTG-A
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 I 1
s Microtus_ochrogaster.CM001673.1                        22817038  8 -  98408828 AAG-----------GTCA-A
i Microtus_ochrogaster.CM001673.1                       C 0 I 4
s Miniopterus_natalensis.LDJU01000022.1                   8207008  8 +  10048721 aca-----------gtta-a
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            31679  8 +     45743 ACA-----------GTTA-A
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        32578  8 +     34273 AAC-----------GTCA-A
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         8249  8 -    104932 AGC-----------ATTA-A
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 I 21
s Mirza_zaza.k141_226143                                     2688  8 +      8497 CAA-----------GTCA-A
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 143993  8 +    154973 AAA-----------GTTA-T
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                158773  8 +    265003 AAA-----------GTTA-A
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 I 1
s Moschus_moschiferus.MosMos_scaffold_146101                 2165  8 -      4346 AAA-----------GTTA-T
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  141870  8 -    168139 AAA-----------GTAA-A
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          16658  8 -    100666 AGT-----------GTTA-A
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70763526  8 +  92629107 aag-----------gtcA-A
i Mus_caroli.LT608236.1                                 C 0 I 4
s Mus_musculus.chr16                                     75486590  8 +  98207768 aag-----------gtca-a
i Mus_musculus.chr16                                    C 0 I 4
s Mus_pahari.LT608305.1                                  67552750  8 +  89017189 aaa-----------gtta-a
i Mus_pahari.LT608305.1                                 C 0 I 4
s Mus_spretus.CM004110.1                                 74327763  8 +  97876770 aag-----------gtca-a
i Mus_spretus.CM004110.1                                C 0 I 4
s Muscardinus_avellanarius.MusAve_scaffold_9643              8291  8 +     98495 AAA-----------GTTG-A
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 I 1
s Mustela_putorius.JH417978.1                             4421110  8 -  28371801 AAA-----------GTTA-A
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     87243  8 -    117718 GAA-----------GTCA-A
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 I 28
s Myotis_brandtii.KE161952.1                               964985  8 +   8389877 Aca-----------gtta-a
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5016667  8 +   6462685 ACA-----------GTta-a
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3462571  8 -   3747815 Aca-----------gtta-a
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         7760  8 +     66751 ACA-----------GTTA-A
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             2634  8 -      8794 AAA-----------GTAA-A
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL204535.1                           2057007  8 +   2354432 AAC-----------Gtca-a
i Nannospalax_galili.KL204535.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               4961  8 +     48152 AAA-----------GTCA-A
i Nasalis_larvatus.k141_153429                          C 0 I 9
s Neomonachus_schauinslandi.NINY01007774.1                4481848  8 -  14209539 AGc-----------gtta-a
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3948604  8 -   4490290 AAA-----------Gtta-t
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  46887  6 +     94413 --A-----------TTTA-A
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1223136                          10750  8 -     11253 AAA-----------GTCA-A
i Nomascus_annamensis.k141_1223136                      C 0 C 0
s Nomascus_concolor.k141_468488                              1393  8 -      1482 AAA-----------GTCA-A
i Nomascus_concolor.k141_468488                         C 0 C 0
s Nomascus_gabriellae.k141_906566                            1382  8 -      2544 AAA-----------GTCA-A
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             21856  8 -  18771707 AAA-----------GTCA-A
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_844529                                  1131  8 +      2124 AAA-----------GTCA-A
i Nomascus_siki_a.k141_844529                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                27295  8 +   3668941 Caa-----------gtta-a
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65564138  8 -  95554990 AAA-----------GTCA-A
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                             983  8 +      6470 AAA-----------GTCA-A
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65666507  8 +  89412551 AAA-----------GTCA-A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4993124  8 -  23139505 CAG-----------GTAA-A
i Ochotona_princeps.JH802095.1                          C 0 I 12
s Odobenus_rosmarus.KB229369.1                             676505  8 -   3126709 AAc-----------gtta-a
i Odobenus_rosmarus.KB229369.1                          C 0 I 7
s Odocoileus_virginianus.KZ101650.1                       1077292  8 +   1425656 AAA-----------GTTA-T
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         34453  8 +     78940 AAA-----------GTTA-T
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  122317  8 +    145789 AAG-----------GTCA-A
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 I 4
s Onychomys_torridus.OnyTor_scaffold_12578                  34076  8 +     62360 AAG-----------GTCA-C
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 I 4
s Orcinus_orca.KB316965.1                                 7222291  8 -   7562323 AAA-----------GTta-t
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              40666  8 -     66828 TTA-----------GTAA-A
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141872798  8 + 163896628 CAA-----------GTCA-A
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      304634  8 -    505867 Caa-----------gtta-a
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       36148  8 +     38679 AAA-----------GTCA-A
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18005589  8 -  38779656 AAA-----------GTCA-A
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134074866  8 - 275406953 AAA-----------GTta-t
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      76080  8 +    140051 AAA-----------GTTA-T
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127571609  8 - 205426864 AAA-----------GTCA-A
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120148762  8 - 196562556 AAA-----------GTCA-A
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  31318  8 +    295523 AAA-----------GTTA-A
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3634919  8 +  18214204 AAA-----------GTTA-A
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5024700  8 -   6340057 AAA-----------GTTA-A
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1063724  8 -   1292953 AAA-----------GTta-t
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188152703  8 - 188283584 AAA-----------GTCA-A
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            48915  8 +     76494 AAA-----------GTCA-A
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47510100  8 +  47705337 AAA-----------GTCA-A
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 64082  8 -    104429 AAA-----------GTCA-A
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  13868  8 -     29451 AAA-----------GTCA-A
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                34271  8 +     35859 AAA-----------GTCA-A
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    112646  8 -    135482 AAA-----------GTTA-A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           2194  8 -     23713 AAA-----------GTCA-A
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            21492  8 -     27972 AAA-----------GTCA-G
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      40096  9 -     45160 AAA-----------GTCAAA
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4947251  8 -   8017169 AAG-----------GTCA-C
i Peromyscus_maniculatus.KI615518.1                     C 0 I 4
s Petromus_typicus.PetTyp_scaffold_33007                     9416  1 -     36578 -------------------A
i Petromus_typicus.PetTyp_scaffold_33007                N 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            118906  8 -    122454 AAA-----------GTTA-T
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           1961  8 -      3310 AAA-----------GTCA-A
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       21867  8 -     82327 AAA-----------GTCA-A
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           18619  8 +     19957 AAA-----------GTCA-A
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26736628  8 +  26888534 AAA-----------GTCA-A
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            93758  8 +    112873 ACA-----------GTTA-A
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             40609  8 -     61926 AAA-----------GTCA-A
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        22038  8 +     78826 AAA-----------GTCA-A
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              5989  8 -     15800 AAA-----------GTCA-A
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                         9187  8 -     16101 AAA-----------GTCA-A
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          2496  8 +      9673 AAA-----------GTCA-A
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13471490  8 -  19735023 AAA-----------GTCA-A
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           10398  8 -     31692 AAA-----------GTCA-A
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           2975  8 +     21690 AAA-----------GTTG-T
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       19835  8 +     44506 AAA-----------GTCA-A
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        20045  8 +     67491 AAA-----------GTCA-A
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      10290  8 -     98129 AAA-----------GTCA-A
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     19891  8 +    147771 AAA-----------GTCA-A
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        20141  8 -     23762 AAA-----------GTCA-A
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                           607  8 -     55515 AAA-----------GTCA-A
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         19960  8 +    152463 AAA-----------GTCA-A
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      6720  8 +      8943 AAA-----------GTCA-A
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                          9680  8 +    134592 AAA-----------GTCA-A
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          20270  8 -     75465 AAA-----------GTCA-A
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              184155  8 -    373494 AAA-----------GTCA-A
i Pongo_abelii.NDHI03003816.1                           C 0 I 11
s Pongo_pygmaeus.ctg62                                   19804062  8 +  19899266 AAA-----------GTCA-A
i Pongo_pygmaeus.ctg62                                  C 0 I 11
s Presbytis_comata.k141_672698                               2199  8 -     15069 AAA-----------GTCA-A
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              2333  8 +     14865 AAA-----------GTCA-A
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                73501  8 +     78963 AGT-----------GTAA-A
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6845539  8 +  12164890 CGA-----------GTCA-A
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     14001  8 -     30946 caa-----------gtca-a
i Propithecus_coquerelli.NW_012147863.1                 C 0 I 2121
s Propithecus_coronatus.k141_1353159                          684  8 +     11805 CAA-----------GTCA-A
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           40020  8 +     52369 CAA-----------GTCA-A
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         32408  8 -     44753 CAA-----------GTCA-A
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            14329  8 +     27322 CAA-----------GTCA-A
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       13968  8 -     53241 CAA-----------GTCA-A
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         36240  8 -     48185 CAA-----------GTCA-A
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           30679  8 +     77221 aag-----------gtca-a
i Psammomys_obesus.NESX01026517.1                       C 0 I 4
s Pteronotus_parnellii.KE867983.1                            1438  8 -     27784 aaa-----------gtta-a
i Pteronotus_parnellii.KE867983.1                       C 0 I 1
s Pteronura_brasiliensis.PteBra_flattened_line_1343        243203  8 -    344369 AAA-----------GTTA-A
i Pteronura_brasiliensis.PteBra_flattened_line_1343     I 214 C 0
s Pteropus_alecto.KB031157.1                             13243562  8 -  17261082 GAA-----------TTTA-A
i Pteropus_alecto.KB031157.1                            C 0 I 113
s Pteropus_vampyrus.KN525959.1                             601515  8 -   3946241 GAA-----------TTTA-A
i Pteropus_vampyrus.KN525959.1                          C 0 I 113
s Puma_concolor.QAVW01000427.1                          131531282  8 - 161321710 AAA-----------GTTA-A
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             26324  8 +     56732 AAA-----------GTCA-A
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6802815  8 +   6970761 AAA-----------GTCA-A
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             2208  8 +     18040 AAA-----------GTCA-A
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                13373  8 +     68503 AAA-----------GTTA-T
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13912657  8 +  90463843 AAG-----------GTCA-A
i Rattus_norvegicus.chr11                               C 0 I 4
s Rhinolophus_sinicus.LVEH01000179.1                      1785189  8 +   2252614 AAA-----------GCTA-A
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 I 179
s Rhinopithecus_bieti.k119_102124                           12761  8 -     14454 AAA-----------GTCA-A
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206374087  8 - 206558726 AAA-----------GTCA-A
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44851735  8 -  45163003 AAA-----------GTCA-A
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                16864  8 +    109198 GGA-----------TTTA-A
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 I 121
s Saiga_tatarica.SaiTat_scaffold_82192                       5158  8 +     12214 AAA-----------GTTA-C
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15669723  8 -  43202129 AAA-----------GACA-A
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        1586  8 +     34089 AAA-----------GACA-T
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              1527  8 -     60842 AAA-----------GACA-A
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              1622  8 +     67014 AAA-----------GACA-A
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              1600  8 +     60816 AAA-----------GACA-A
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 1541  8 -     76454 AAA-----------GACA-A
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17338052  8 -  30362882 AAA-----------GTCA-A
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         17651  8 -     62485 AAA-----------GTCA-A
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   28927 19 -    114521 AAAATACAAAGAAAGTCA-A
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1527475                       24749  8 +     26421 AAA-----------GTCA-A
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       5209  8 +     20762 AAA-----------GTCA-A
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         38944  8 +     40653 AAA-----------GTCA-A
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                            9501  8 -     12194 AAA-----------GTCA-A
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     22923  8 -     27512 AAA-----------GTCA-A
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         31942  8 -     33692 AAA-----------GTCA-A
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   96864  8 -    120886 AAG-----------GTCA-A
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 I 4
s Solenodon_paradoxus.SolPar_flattened_line_1012            15580  8 +    739146 AAA-----------GTCA-A
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 I 6
s Sorex_araneus.JH798170.1                               17747799  6 -  27805282 aaa------------t-a-a
i Sorex_araneus.JH798170.1                              C 0 I 5
s Spermophilus_dauricus.KZ294190.1                        2237093  8 +   2842873 AAA-----------GTCA-A
i Spermophilus_dauricus.KZ294190.1                      C 0 I 8
s Spilogale_gracilis.SpiGra_flattened_line_905             231971  8 -    276980 AAA-----------GTTA-A
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            24534  8 +     62062 AAA-----------GTTA-A
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189269436  8 + 218635234 AAa-----------gtta-a
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                     13898915  8 +  13920577 AAA-----------GTCA-A
i Symphalangus_syndactylus.tarseq_24                    C 0 I 64
s Tadarida_brasiliensis.TadBra_scaffold_145589               3385  8 -      6213 AAA-----------CTTA-A
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               12308  8 +     45698 AAA-----------GTCA-A
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      804305  8 +   1148477 AAC-----------TTTA-A
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  54966  8 +     99546 AAC-----------TTTA-A
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               23628  8 +     42269 AAA-----------GTCA-A
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               56944  8 +     65473 AAA-----------GTCA-A
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194004239  8 - 194193292 AAA-----------GTCA-A
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             36508  1 -     47444 -------------------A
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         N 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  1189  8 +      6782 AAA-----------GCCA-A
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  133446  8 -    259118 AAA-----------GATA-A
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 I 1
s Trachypithecus_auratus.k141_738098                        23319  8 +     38948 AAA-----------GTCA-A
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   17046  8 -     32910 AAA-----------GTCA-A
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       22944  8 +     24652 AAA-----------GTCA-A
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      1822  8 -      3559 AAA-----------GTCA-A
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           39768  8 -     54611 AAA-----------GTCA-A
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       15767  8 +     17312 AAA-----------GTCA-A
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    23130  8 -     25040 AAA-----------GTCA-A
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          1796  8 +      3528 AAA-----------GTCA-A
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  48158  8 +     51589 AAA-----------GTCA-A
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       11334  8 +     14732 AAA-----------GTCA-A
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       1811  8 -     28054 AAA-----------GTCA-A
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44656606  8 -  44834318 AAA-----------GTCA-A
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        1616  8 +      3372 AAA-----------GTCA-A
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   2784  8 +     90398 AAT-----------GTTA-T
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 I 21
s Trichechus_manatus.JH594618.1                          16078890  8 +  31416278 aaa-----------gtaa-a
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2789021  8 -   3938065 aaa-----------gtta-a
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    1529  8 +     13056 AAA-----------GTTA-A
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69311009  8 -  96451834 AAA-----------GTta-t
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 24131  8 -     25548 AAA-----------GCTA-A
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6511550  8 +  28682327 AAc-----------gtta-a
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  2378  8 -     20643 CAA-----------GTCA-A
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             21922  8 -     33872 CAA-----------GTCA-A
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1522236  8 -   2331223 aaa-----------gtta-a
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                134703  8 -    281493 CAA-----------GTTA-A
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       124192  8 -    134049 AAA-----------GTCA-A
i Xerus_inauris.XerIna_scaffold_7898                    C 0 I 9
s Zalophus_californianus.ZalCal_flattened_line_4097        211230  8 -    227762 AAC-----------GTTA-A
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     12409  9 -     20485 TAA-----------GTCATA
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 I 10
s Ziphius_cavirostris.ZipCav_flattened_line_127025           4511  5 -      8775 AAA-----------G----T
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Bos_taurus.CM000177.6                                 136292828  0 - 158972876 C
e Bos_mutus.JH883513.1                                     569472  8 -    998990 I
e Bos_indicus.CM003021.1                                138137095  0 - 161108492 C
e Bison_bison.KN264915.1                                  6556860  0 +   6870073 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16291  1 -    119109 I
e Octodon_degus.JH651621.1                                3678743 1836 +  10294119 I
e Dolichotis_patagonum.DolPat_scaffold_14102                33375  0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             56104 16 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                14631 16 +     26546 I
e Ctenodactylus_gundi.CteGun_scaffold_447                  205376  0 -    956709 C
e Cavia_tschudii.CavTsc_scaffold_488                       173989  0 +    436027 C
e Cavia_porcellus.DS562889.1                             15795798  0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15783848 16 -  24422027 I

a score=0.000000
s hg38.chr4_GL000008v2_random                                8874 64 +    209709 CA-CTG-----T--AAA-AA-AT---AAAGTGAT-A-TTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
s Acinonyx_jubatus.LLWD01000356.1                         2030950 75 +   3721120 AA-TTG-----T--AGG-AA-AT---AAAGTTAT-C-ATTTA---TCTGC-T-GAATATCCTTACAAATCTCTTACA--------AA---TA-----------------A------G----A--------GAAC-AA---TAA--A-T
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    109562 56 -    189883 ----------------C-AA-AA---ATGTTTAT-C-ATTCA---TCTGCTG--CATCCACTTTC-----------A--------GA---CA-----------------A------A----A-------GGA-A-AA---TAA--A-T
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 4 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10654285 64 +  23371972 aa-atg-----t--aag-aa-at---aaagtGAT-C-ATTTA---TCTGC-T-GAATCTCCTTCC-----------A--------AA---TA-----------------A------A----A--------GTAC-AA---TAA--A-T
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7091005 64 -  16596857 aa-atg-----t--aag-aa-at---aaagtGAT-C-AGTTA---TCTGC-T-AGACCCCCTTCC-----------A--------AA---TA-----------------A------A----A--------GTAC-AA---TAA--A-T
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                    9976 39 -     22067 ---------------------------AAGCAAT-C-ATTAA---TTTGGTG--CATCTCCTTTA-----------A--------AA---TT-----------------A------A----A--------------------------
i Allactaga_bullata.AllBul_scaffold_70162               I 7 I 8
s Allenopithecus_nigroviridis.k141_3103707                  59887 64 +     61638 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        51695 64 +     53391 CA-CTG-----T--AAG-AA-AT---ACAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         2420 64 +     72529 CA-CTG-----T--AAG-AA-AT---ACAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          1995 64 +      3797 CA-CTG-----T--AAG-AA-AT---ACAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             7184 64 -     18050 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TATGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  8295 64 -     11521 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TATGA-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              7861 64 -     21359 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TATGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1856473                                6238 64 +      7227 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TATGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Alouatta_juara.k141_1856473                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          7152 64 -     10438 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TATGA-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            3808 64 +      7047 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TATGG-T-CTATCTTCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             7094 64 +     10410 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TATGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                             897 64 -      4927 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TATGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             3825 64 +      6429 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TATGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3517706 56 +   4113121 aa-atg-----t--aag-aa-at---aaagtGAT-G-ATTTA---TCTGC-T-Gaatctcttccc-----------c--------ac--ccc--------------accc------c-------------------------------
i Ammotragus_lervia.NIVO01013474.1                      C 0 I 17
s Anoura_caudifer.AnoCau_scaffold_422                      387900 63 -    631301 -A-ATG-----T--AAG-AA-AT---AAAGAGAT-C-ATTTA---TTGGC-T-AAATCTCCTTAC-----------A--------AA---TA-----------------A------A----A--------GAAC-AA---TAA--A-T
i Anoura_caudifer.AnoCau_scaffold_422                   I 1 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            28316 46 +     33004 AA-ATG-----T--AAG-AA-AT---AAAGTGTT-G-ATTTA---TCTGC-T-GAATCTCTTTTC-----------A-----------------------------------------------------------------------
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 I 18
s Aotus_azarae.k141_3170768                                 59543 64 +     78111 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTCA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            2470 64 +     22701 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5746428 64 +   9889416 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTgc-----------a--------aa---ta-----------------a------a----agaa--------c-aa---taa--a-t
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             3013 64 -    104377 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               3019 64 +     23246 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     1047 60 +      5067 ----TG-----T--AAA-AA-AT---AACGTGAT-C-ACTTA---TCTTC-TG-TATCTT-TTTC-----------A--------AA---CA-----------------A------A----A--------GAAC-AG---TAA--A-T
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      15006 61 +     17483 CA-CTG-----T--AAG-GA-AT---AAAGTTAT-C-ATTTA---TCTCC-T-CTATCTCCTCCC-----------A--------AA---TA-----------------A------A----A-----------C-AA---TAG--A-T
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 6292 49 -     29036 -A-ATG-----T--AAG-AA-AT---AAAGAGAT-C-ACTTG---TTGGC-T-AAATC---TTAC-----------A--------AA---TA-----------------A------A----A--------------------------
i Artibeus_jamaicensis.ArtJam_scaffold_41619            I 1 I 8
s Ateles_geoffroyi_b.tarseq_2582                             9536285 64 +  39197703 CA-CTG-----T--AAG-AA-AT---AAAGTGTT-C-CTTTA---TATGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             57569 64 +     85812 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TGTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 8568 64 +     89302 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TGTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             13078 64 -     58268 CA-CTG-----T--AAG-AA-AT---AAAGTGTT-C-CTTTA---TATGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             61064 64 +    119057 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TGTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               3015 64 -     25888 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TGTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 3765 61 -     16375 CA-CTA-----C--AAG-AA-AT---AAAGTGAT-A-ATTTA---TCTGC-T-CCATCTCCTTCC-----------A--------AA---TA-----------------A------A----A-----------G-AA---TAA--A-T
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                                85 61 +      2719 CA-CTA-----C--AAG-AA-AT---AAAGTGAT-A-ATTTA---TCTGC-T-CCATCTCCTTCC-----------A--------AA---TA-----------------A------A----A-----------G-AA---TAA--A-T
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26377733 64 +  51448160 aa-atg-----t--aag-aa-at---aaagtGAT-A-ATTTA---TCTGC-T-GAATCTCTTTTC-----------C---------A--AAA-----------------A------C----A--------GAGC-AA---TAA--A-T
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        2964 64 -     13118 aa-atg-----t--aag-aa-at---aaagtGAT-A-ATTTA---TCTGC-T-GAATCTCTTTTC-----------C---------A--AAA-----------------A------C----A--------GAGC-AA---TAA--A-T
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   40807 51 -     72089 AA-ATA-----T--AAG-AA-AT---AAAGTGAT-G-ATTTA---TCTGC-T-GAATCTCTTTTC-----------C--------AA--AAC--------------------------------------------------------
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 I 17
s Bison_bison.KN264915.1                                  6556860 27 +   6870073 -------------------------------------------------------------------------------------gga--aa-----------------a------a-aaaa---aaaaagagt-ag---taa--a-T
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138137095 28 - 161108492 -------------------------------------------------------------------------------------ggga-aa-----------------a------a-aaaa---aaaaagagN-AG---TAA--A-T
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     569480 17 -    998990 -------------------------------------------------------------------------------------------------------------------------a---aaaaagagc-ag---taa--A-T
i Bos_mutus.JH883513.1                                  I 8 C 0
s Bos_taurus.CM000177.6                                 136292828 28 - 158972876 -------------------------------------------------------------------------------------ggga-aa-----------------a------a-aaaa---aaaaagagc-ag---taa--A-T
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1228539 73 -   1914593 AA-ATG-----T--AAG-AA-AT---AAAGTGAT-G-ATTTA---TCTGC-T-Gaatatcttttc-----------t--------aaa--aa-----------------a------a-aaaa---agaaagaac-ag---taa--A-T
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               110904 64 -    171031 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                  9930 64 +    125063 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                11978 64 -    216513 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        4518 64 -    134917 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3217166 65 -   8989139 AA-AAG-----T--AGG-AA-GT---AAAGTGAT-AAATTTA---TCTGC-T-AAATCTCTTTcc-----------c--------aa---aa-----------------a------a----a--------gagc-aa---aaa--a-t
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           394870 65 -  15254737 AA-AAG-----T--AGG-AA-GT---AAAGTGAT-AAATTTA---TCTGC-T-AAATCTCTTTcc-----------c--------aa---aa-----------------a------a----a--------gagc-aa---aaa--a-t
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2970604 65 +   6889770 AA-AAG-----T--AGG-AA-GT---AAAGTGAT-AAATTTA---TCTGC-T-AAATCTCTTTcc-----------c--------aa---aa-----------------a------a----a--------gagc-aa---aaa--a-t
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11515664 64 +  39901454 AA-ATG-----T--AAG-AA-AT---AAAGTGAT-C-ATTCA---TCTGC-T-GAATCTCCTTCC-----------A--------AA---TA-----------------A------A----A--------GTAC-CA---TAA--A-T
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   10682 64 +     87036 AA-ATG-----T--AAG-AA-AT---AAAGTGAT-C-ATTCA---TCTGC-T-GAATCTCCTTCC-----------A--------AA---TA-----------------A------A----A--------GTAC-CA---TAA--A-T
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11262325 64 -  35597290 aa-atg-----t--aag-aa-at---aaagtGAT-C-ATTCA---TCTGC-T-GAATCTCCTTCC-----------A--------AA---TA-----------------A------A----A--------GTAC-CA---TAA--A-T
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11084854 64 +  39895921 aa-atg-----t--aag-aa-at---aaagtGAT-C-ATTCA---TCTGC-T-GAATCTCCTTCC-----------A--------AA---TA-----------------A------A----A--------GTAC-CA---TAA--A-T
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16451878 64 -  44759192 aa-atg-----t--aag-aa-at---aaagtGAT-C-ATTCA---TCTGC-T-GAATCTCCTTCC-----------A--------AA---TA-----------------A------A----A--------GTAC-CA---TAA--A-T
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21322813 46 + 157394656 AA-ATG-----T--AAG-AA-AT---AAAGTGAT-G-ATTTA---TCTGC-T-GAATctctcccc-----------c-----------------------------------------------------------------------
i Capra_aegagrus.CM003214.1                             C 0 I 25
s Capra_hircus.CM004562.1                               135704040 46 - 157403528 AA-ATG-----T--AAG-AA-AT---AAAGTGAT-G-ATTTA---TCTGC-T-GAATCtcttccc-----------c-----------------------------------------------------------------------
i Capra_hircus.CM004562.1                               C 0 I 25
s Capromys_pilorides.CapPil_scaffold_647363                  1590 24 +      1887 ------------------------------------------------------------TTGTA-----------A--------AC---TG-----------------A------C----A--------GAAC-AC---TAA--A-C
i Capromys_pilorides.CapPil_scaffold_647363             I 28 C 0
s Carlito_syrichta.NW_007248099.1                          306155 64 +    345090 CA-CTG-----T--AAG-AA-AT---CAAGTAAT-C-ATTTA---TCTGT-T-CTGTCTCCttcc-----------a--------aa---ta-----------------a------a----agaa--------c-aa---tga--A-T
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               57084 63 +     67245 -A-ATG-----T--AAG-AA-AT---AAAGAGAT-C-ATTTA---TTGGC-T-AAGTCTCCTTAC-----------A--------AA---TA-----------------A------A----A--------GAAC-AA---TAA--A-T
i Carollia_perspicillata.CarPer_scaffold_4436           I 1 C 0
s Castor_canadensis.CasCan_scaffold_47037                   27572 63 +     33760 -A-CCA-----T--AAG-AA-AT---AAAGTGAT-C-ATTTA---TCTGCTG--TATCTCCTTTC-----------A--------AA---CA-----------------C------A----A--------GAAC-AA---TAA--A-T
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   156376 66 -    276539 AA-GTG-----T--AAG-AA-AT---CAAGTGGT-A-ATTTA---TCTGC-TGAAATCTCTTTCT-----------C--------AA--AAA-----------------A------A----G--------GAGC-AA---TAA--A-T
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18887756 64 -  29618158 CA-CTA-----T--GAG-AA-AT---AAAGTTAT-C-CTCTA---TCTGG-C-CTATCTCCTTGC-----------A--------AA---TA-----------------G------A----AAAA--------C-GA---TAA--A-T
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 5300 64 -     26817 CA-CTA-----T--GAG-AA-AT---AAAGTTAT-C-CTTTA---TCTGG-C-CTATCTCCTTGC-----------A--------AA---TA-----------------G------A----AAAA--------C-GA---TAA--A-T
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                 9543 64 +     25043 CA-CTA-----T--GAG-AA-AT---AAAGTTAT-C-CTCTA---TCTGG-C-CTATCTCCTTGC-----------A--------AA---TA-----------------G------A----AAAA--------C-GA---TAA--A-T
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         5192 64 +     21754 CA-CTG-----T--AAG-AA-AT---GAAGTAAT-C-ATTTA---TCTGT-T-CTGTCTCCTTCC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TGA--A-T
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4360874 64 +   7569818 aa-atg-----t--aag-aa-at---aaagtgAT-C-ATTTA---TCTGC-T-AAGTCTccttcc-----------a--------aa---ta-----------------a------a----a--------gaac-aa---taa--a-t
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623          629 64 -      9338 AA-ATG-----T--AAG-AA-AT---AAAGTGAT-C-ATTTA---TCTGC-T-AAGTCTCCTTCC-----------A--------AA---TA-----------------A------A----A--------GAAC-AA---TAA--A-T
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6551679 64 +   6739814 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTgc-----------a--------aa---ta-----------------a------a----agaa--------c-aa---taa--a-t
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      53156 64 -     54931 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         18140 64 -     19697 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         55671 64 -    107033 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        2116 64 -      3853 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          26049 64 +     30494 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           2073 64 -      4022 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          1966 64 -      3505 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           20756 64 +     35983 CA-CTG-----T--AGG-AA-AT---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11987292 64 +  12117833 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------T-AA---TAA--A-T
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46474045 64 +  46592721 CA-CTG-----T--AGG-AA-AT---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      31872 64 +     33420 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        1908 64 -      3443 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      2899 64 -      4669 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        2699 64 -      4411 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         2224 64 -      4205 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_1070855           438 50 -      1715 AA-ATG-----T--GAA-AA-AT---GAAGTGAT-C-TTTTA---TCCCC-T---ATCTCCTTCC-----------A--------AA---TA-----------------A------A-------------------------------
i Chaetophractus_vellerosus.ChaVel_scaffold_1070855     C 0 I 8
s Cheirogaleus_major.k141_1157592                           56071 61 -     68416 CA-CTA-----C--AAG-AA-AT---AAAGTGAT-C-ATTTA---TCTGC-T-CTATTTCCTTCC-----------A--------AA---TA-----------------A------A----A-----------G-AA---TAC--A-T
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            5117 61 +     13308 CA-CTA-----C--AAG-AA-AT---AAAGTGAT-C-ATTTA---TCTGC-T-CTATTTCCTTCC-----------A--------AA---TA-----------------A------A----A-----------G-AA---TAC--A-T
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             2578 64 -     18223 CA-CTG-----T--AAG-AA-AC---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             19601 64 +     25473 CA-CTG-----T--AAG-AA-AC---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           38640 64 +     57117 CA-CTG-----T--AAG-AA-AC---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          43315 64 +     54541 CA-CTG-----A--AAG-AA-AC---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15958923 29 +  43084221 -a-atg-----t--ata-aa-tt---a-aatatt-c-atttg---tctg---------------------------------------------------------------------------------------------------
i Chinchilla_lanigera.JH721867.1                        C 0 I 24
s Chiropotes_israelita.k141_1189915                         68125 64 +    196370 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          12306 64 +     40510 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15135506 64 -  15256731 CA-CTG-----T--AAG-AA-AT---ACAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      30552 64 -     53260 CA-CTG-----T--AAG-AA-AT---ACAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101141001 64 + 101219884 CA-CTG-----T--AAG-AA-AT---ACAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTgc-----------a--------aa---ta-----------------a------a----agaa--------c-aa---taa--a-t
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                14050 32 -     21363 AA-ATA-----T--GAA-AA-AT---CAAGTGAT-C-TTTTA---CCTGC--------------------------------------------------------------------------------------------------
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 I 27
s Choloepus_hoffmanni.KN194586.1                           759356 63 +    964067 aa-ata-----t--gaa-aa-at---caattgat-c-tttTA---CCTGC-t---gtctctttcc-----------a--------aa---ta-----------------a------a----a--------agaacaa---tac--a-T
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_141308              6151 64 -     12508 AA-TT----ATA--AAA-GG-AT---AATGTAAT-C-A-TTA---TCTGC-T-GAATCTCCATAA-----------A--------AA---TA-----------------A------A----A--------GAAA-AA---TAA--A-T
i Chrysochloris_asiatica.ChrAsi_scaffold_141308         C 0 C 0
s Colobus_angolensis.KN985967.1                          10879580 64 +  10971483 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGc-----------a--------aa---ta-----------------a------a----agaa--------c-aa---taa--a-t
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147660738 64 + 156195979 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            12725 64 +     23629 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TCTGG-G-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60610341 65 +  78930452 aa-atg-----t--aaa-aa-at---aaaagaat-t-atgcA---TCTGC-T-AAATCTCCTTCc-----------a--------aa---tg----------------aa------a----c--------aaac-aa---taa--a-t
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         36792 63 -     40477 -A-ATG-----T--AAG-AA-AT---AAAGTGAT-C-ATTTA---TCTGC-T-GAATCTCCTTCC-----------A--------AA---TA-----------------A------A----A--------GAAC-AA---TAA--A-T
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     I 2 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 274659 56 -    399297 ----------------T-AA-AA---ATATTTAT-T-ATTCA---TCTGCTG--CCTCTCCTTTC-----------A--------GA---CA-----------------A------A----A-------GGA-A-AA---TAA--A-T
i Cricetomys_gambianus.CriGam_scaffold_949              I 4 C 0
s Cricetulus_griseus.LT883672.1                          53026192 56 +  72327488 ----------------C-AA-AA---CTGTTTAT-C-ATTCA---TCTGCTG--CATCTTTTTtc-----------a--------ga---ca-----------------a------a----a--------ggaa-aa---taa--a-t
i Cricetulus_griseus.LT883672.1                         I 4 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             17099 42 -     19186 ---------------------AC---AAATGGAT-G-ACTTA---TCTGC-T-GAATCTCCTTTC-----------A--------AA---TC-----------------A------A----A--------------------------
i Crocidura_indochinensis.CroInd_scaffold_38409         I 5 I 8
s Cryptoprocta_ferox.CryFer_flattened_line_19014            48975 64 -     70449 AA-ATG-----T--AGG-AA-AT---AAAGTGAT-C-ATTTA---TCTGC-T-GAATCTCCTTAC-----------A--------AA---TA-----------------A------A----G--------GAAC-AA---TAA--A-T
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 27723 24 -     67205 ------------------------------------------------------------CTCTA-----------A--------AC---TA-----------------A------C----A--------GAAC-AC---TAA--A-T
i Ctenomys_sociabilis.CteSoc_scaffold_19489             I 28 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  205376 26 -    956709 --------------TAA-AA-CT---AAAGTGCTAC-ATGTA---TGTG---------------------------------------------------------------------------------------------------
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 I 16
s Dasypus_novemcinctus.JH568778.1                          179262 36 -   6883506 ---------------------at------gtcat-c-tttTA---TTCCC-T---ATCTCCTtcc-----------a--------aa---ta-----------------a------a-------------------------------
i Dasypus_novemcinctus.JH568778.1                       I 9 I 8
s Daubentonia_madagascariensis.ctg11                     16841938 61 +  31942871 CA-CTG-----T--AAG-AA-AT---AAAGTCAT-C-ATTTA---TCTGC-T-CTATCTCCTTCC-----------A--------AA---TA-----------------A------A----A-----------G-AA---TAA--A-T
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80034417 64 -  96802777 aa-atg-----t--aag-aa-at---aaagtGAT-A-ATTTA---TCTGC-T-GAATCTCTTTTC-----------C---------A--AAA-----------------A------C----A--------GAGC-AA---TAA--A-T
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18696396 63 -  18957592 -a-atg-----t--aag-aa-at---aaagagAT-C-ACTTA---TCGGC-T-AAATCTCcttac-----------a--------aa---ta-----------------a------a----a--------gaac-aa---taa--a-t
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 319535 64 +    993696 aa-atg-----t--aag-aa-at---aaagTGAT-C-ATTTA---TCTGC-T-AAGTCTccttcc-----------a--------aa---ta-----------------a------a----a--------gaac-aa---taa--a-t
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                    199 40 +    151128 ---------------------------------------TTA---TCTGC-T-AAGTCTCCTTCC-----------A--------AA---TA-----------------A------A----A--------GAAC-AA---TAA--A-T
i Diceros_bicornis.DicBicMic_scaffold_9545              N 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   154814 29 +    228994 -A-ATG-----T--GTA-AA-AT---A-AATATT-C-ATTTG---TCTG---------------------------------------------------------------------------------------------------
i Dinomys_branickii.DinBra_scaffold_1996                C 0 I 24
s Dipodomys_ordii.KN672545.1                              3652554 48 +   4240102 -A-CTG-----T--AAG-AA-AT---AGAGTGAT-C-ATTAA---TCTGCTG--TATCTCctttc-----------a--------aa---t---------------------------------------------------------
i Dipodomys_ordii.KN672545.1                            C 0 I 13
s Dipodomys_stephensi.DipSte_scaffold_44365                 24109 48 +     28912 -A-CTG-----T--AAG-AA-AA---AGACTGAT-C-ATTAA---TCTGCTG--TATCTCCTTTC-----------A--------AA---T---------------------------------------------------------
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 I 13
s Echinops_telfairi.JH980316.1                           22991644 63 -  44670279 AA-AT----ATG--TAG-GA-AC---AAAGTAAT-C-AATTA---TGTGC-T-GAATCTCCTTCC-----------A--------AA---TA-----------------A------A----T---TAA-----C-AA---TAN-----
i Echinops_telfairi.JH980316.1                          C 0 I 1367
s Elaphurus_davidianus.JRFZ01086400.1                     1489067 76 +   1727528 aa-atg-----t--aag-aa-at---aaagTGAT-G-ATTTA---TCTGC-T-GAatctcttttc-----------c--------aaa--aa-----------------aaaaaaaa----a---aaaaagagc-ag---taa--A-T
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7803827 72 +  15467074 at-atatttatt--taa-aa-aaaatacaggaat-T-GTACA---TCTGC-T-GAATACCCTTCC-----------A--------CA---TA-----------------A------A----A---AA-----TC-CC---aaa--c-c
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        236849 56 -    369425 ----------------C-AA-AA---ATACTTAT-T-ATTCA---TCTGCTG--GATCTCCTTGA-----------A--------CA---CA-----------------A------A----A--------GGGA-AA---TAA--A-T
i Ellobius_lutescens.LOEQ01003611.1                     I 4 C 0
s Ellobius_talpinus.LOJH01090055.1                           3864 57 -      7838 ----------------c-aa-aa---atatttat-c-attca---tCTGCTG--GATCTCCTTTC-----------A--------ca---ca-----------------aa-----a----a--------ggga-aa---taa--a-t
i Ellobius_talpinus.LOJH01090055.1                      I 4 C 0
s Enhydra_lutris.KZ291749.1                              85868735 64 +  99434291 AA-GTG-----T--AAG-AA-AT---AAAGTGAT-C-ATTTA---TCTGC-T-GAatctctttcc-----------a--------aa---ta-----------------a------a----a--------atac-aa---taa--a-t
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Equus_asinus.JREZ01000062.1                             5850255 64 -   7175178 aa-atg-----t--aag-aa-at---aaaggGAT-C-ATTTA---TCTGC-T-GAATCTGcttcc-----------a--------aa---ta-----------------a------a----a--------gaac-aa---taa--a-t
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13348757 64 +  41866177 aa-atg-----t--aag-aa-at---aaaggGAT-C-ATTTA---TCTGC-T-GAATCTgcttcc-----------a--------aa---ta-----------------a------a----a--------gaac-aa---taa--a-t
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          10247 64 +     92910 aa-atg-----t--aag-aa-at---aaaggGAT-C-ATTTA---TCTGC-T-GAATCTGcttcc-----------a--------aa---ta-----------------a------a----a--------gaac-aa---taa--a-t
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11529843 63 +  16010500 -a-ata-----t--aaa-aa-gt---agaGAGGC-C-ATTCA---TCTGC-C-AAATCACTTTCT-----------C--------TG---TA-----------------A------A----A--------GAAC-AA---CGC--A-T
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48767684 64 -  48907691 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          312619 64 +    330699 AA-ATG-----T--AAG-AA-AT---AAAGTGAT-A-ATTTA---TCTGC-T-GAATCTCTTTTC-----------C---------A--AAA-----------------A------C----A--------GAGC-AA---TAA--A-T
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             59049 64 +     89355 AA-ATG-----T--AAG-AA-AT---AAAGTGAT-A-ATTTA---TCTGC-T-GAATCTCTTTTC-----------C---------A--AAA-----------------A------T----A--------GAGC-AA---TAA--A-T
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              2118 61 +     13586 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-ATTTA---TCTGC-T-CTATCTCCTTCC-----------A--------AA---TA-----------------A------A----A-----------G-AA---TAA--A-T
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               2053 61 -      6809 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-ATTTA---TCTGC-T-CTATCTCCTTCC-----------A--------AA---TA-----------------A------A----A-----------G-AA---TAA--A-T
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             8526 61 +     36558 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-ATTTA---TCTGC-T-CTATCTCCTTCC-----------A--------AA---TA-----------------A------A----A-----------G-AA---TAA--A-T
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             4842 61 +     60246 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-ATTTA---TCTGC-T-CTATCTCCTTCC-----------A--------AA---TA-----------------A------A----A-----------G-AA---TAA--A-T
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 8330 61 +    109717 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-ATTTA---TCTGC-T-CTATCTCCTTCC-----------A--------AA---TA-----------------A------A----A-----------G-AA---TAA--A-T
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               12704 61 +     16540 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-ATTTA---TCTGC-T-CTATCTCCTTCC-----------A--------AA---TA-----------------A------A----A-----------G-AA---TAA--A-T
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                12980 61 +     27497 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-AATTA---TCTGC-T-CTATCTCCTTCC-----------A--------AA---TA-----------------A------A----A-----------G-AA---TAA--A-T
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           15442 61 +     26808 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-ATTTA---TCTGC-T-CTATCTCCTTCC-----------A--------AA---TA-----------------A------A----A-----------G-AA---TGA--A-T
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                30170 61 +     46535 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-ATTTA---TCTGC-T-CTATCTCCTTCC-----------A--------AA---TA-----------------A------A----A-----------G-AA---TAA--A-T
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              12893 61 -     29447 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-ATTTA---TCTGC-T-CTATCTCCTTCC-----------A--------AA---TA-----------------A------A----A-----------G-AA---TAA--A-T
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129889927 75 - 159252932 AA-TTG-----T--AGG-AA-AT---AAAGTTAT-C-ATTTA---TCTGC-T-GAATCTCCTTACAAATCTCTTACA--------AA---TA-----------------A------G----A--------GAAC-AA---TAA--A-T
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129277002 75 - 158578461 AA-TTG-----T--AGG-AA-AT---AAAGTTAT-C-ATTTA---TCTGC-T-GAATCTCCTTACAAATCTCTTACA--------AA---TA-----------------A------G----A--------GAAC-AA---TAA--A-T
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 18136 75 +     52776 AA-TTG-----T--AGG-AA-AT---AAAGTTAT-C-ATTTA---TCTGC-T-GAATCTCCTTACAAATCTCTTACA--------AA---TA-----------------A------G----A--------GAAC-AA---TAA--A-T
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13889885 30 -  19261668 -a-atg-----t--ata-aa-tt---aaaatgtt-c-gTTTG---tgtg---------------------------------------------------------------------------------------------------
i Fukomys_damarensis.KN123630.1                         C 0 I 25
s Galago_moholi.ctg555                                     208065 61 -    847004 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-ATTTA---TCCCC-T-CTGTCTCCTTCC-----------A--------AG---TA-----------------A------A----A-----------T-AA---TAA--A-T
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           10446 61 -     43889 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-ATTTA---TCCCC-T-CTGTCTCCTTCC-----------A--------AG---TA-----------------A------A----A-----------T-AA---TAA--A-T
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           7517 51 +     27357 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-ATTTA---TCCCC-T-CTATCTTCTTCC-----------A--------AA---TA-----------------A--------------------------------------
i Galagoides_demidoff.k141_1769638                      C 0 I 7
s Galeopterus_variegatus.GalVar_scaffold_354               153393 64 +    324696 AA-TTG-----T--AAG-AA-AT---AAACTGAT-C-ATTTA---TCTTC-T-GTATCTCCTTCT-----------A--------GA---TA-----------------A------A----A---CAA-----C-AA---TAA--A-T
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    178588 52 -    189561 AA-ACG-----T--AAG-AA-AT---AACGTGAT-G-ATTTA---TCTCC-T-GAatctcttttc-----------c--------aaa--aa-----------------a--------------------------------------
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 I 17
s Glis_glis.GliGli_scaffold_79770                            9797 63 -     18683 -A-CTG-----T--AAA-AA-GC---AAAGTTAT-C-ATTTA---TCTAC-TG-CTCCTCCTTTC-----------A--------AA---TG-----------------A------A----A--------GAAC-AA---TAA--A-T
i Glis_glis.GliGli_scaffold_79770                       I 1 C 0
s Gorilla_beringei.k141_111300                               2273 64 -     14630 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------T-AA---TAA--A-T
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119649372 64 - 195582420 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTtgc-----------a--------aa---ta-----------------a------a----agaa--------t-aa---taa--a-t
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   74343 52 +    118900 -A-CTA-----T--AAA-AA-GC---AAAGTTAG-C-ATTTA---TCTAC-TA-TTCCTCCTTTC-----------A--------AA---TG-----------------A------A----A--------------------------
i Graphiurus_murinus.GraMur_scaffold_4493               I 1 I 8
s Hapalemur_alaotrensis.k141_1198205                         2688 61 +      3980 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-ATTTA---TCTGC-T-CTATCTCCTTCC-----------A--------AA---TA-----------------A------A----A-----------G-AA---TAA--A-T
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             25163 61 +     26611 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-ATTTA---TCTGC-T-CTATCTCCTTCC-----------A--------AA---TA-----------------A------A----A-----------G-AA---TAA--A-T
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             2624 61 +     56096 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-ATTTA---TCTGC-T-CTATCTCCTTCC-----------A--------AA---TA-----------------A------A----A-----------G-AA---TAA--A-T
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        25899 61 -     42470 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-ATTTA---TCTGC-T-CTATCTCCTTCC-----------A--------AA---TA-----------------A------A----A-----------G-AA---TAA--A-T
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        42494 61 -     54384 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-ATTTA---TCTGC-T-CTATCTCCTTCC-----------A--------AA---TA-----------------A------A----A-----------G-AA---TAA--A-T
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              14183 64 +     53719 AA-ATG-----T--AGG-AA-AT---AAAGTGAT-C-ATTTA---TCTGC-T-GAATCTCCTTAT-----------A--------AA---TA-----------------A------A----G--------GAAC-AA---TAA--A-T
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                25072 85 -     91191 AA-ATG-----T--AAG-AA-AT---AAAGTGAT-G-ATTTA---TCTGC-T-GAATCTCTTCCC-----------CCACCCCCCCC--CAC--------------CCCC------CGGAAA---AAAAAGAGC-AG---TAA--A-T
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2548266 30 +  31725842 -a-atc-----t--ata-aa-tt---aaaatatt-c-actag---TCTG---------------------------------------------------------------------------------------------------
i Heterocephalus_glaber.JH602058.1                      C 0 I 24
s Heterohyrax_brucei.HetBruBak_scaffold_25354               53645 62 +     73687 -G-ATA-----T--AAA-AAC-T---AA---AAT-C-ATTTA---TCTGT-G-AAATCTCCTTCC-----------A--------AA---TA-----------------A------A----A---AAAAA---C-AA---TAA--A-T
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              144651 67 +    277961 AA-ATG-----T--AAG-AA-AT---AAAGTAAT-A-ATTTATCATCTGC-T-GAGTCTCTTTTC-----------C---------A--AAA-----------------A------G----A--------GAGC-AA---TAA--A-T
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hoolock_leuconedys.ctg79                                       163 64 -   7690867 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-TTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 13250 64 -     67322 AA-ATG-----T--AGG-AA-AT---AAAATGAT-C-ATTTA---TCTGC-T-GAATCTCCTTAC-----------A--------AA---TA-----------------A------A----A--------GAAC-AA---TAA--A-T
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hylobates_abbotti.k141_493872                              2090 64 +      5897 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-TTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_1485652                               516 64 -      1697 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-TTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Hylobates_agilis.k141_1485652                         I 50 C 0
s Hylobates_klossii.k141_584463                               466 64 -      1009 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-TTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Hylobates_klossii.k141_584463                         C 0 I 38
s Hylobates_pileatus_b.ContigUN                                 14621635 64 -  25970782 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-TTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1133650                            1524 64 -      2775 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-TTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             30127 64 -     60944 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-TTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     3296 30 +     22540 -A-ATG-----T--ATA-AA-TT---AAAATGTT-C-ATTTC---TTTA---------------------------------------------------------------------------------------------------
i Hystrix_cristata.HysCri_scaffold_50788                C 0 I 24
s Ictidomys_tridecemlineatus.JH393315.1                   7123190 47 +  13083262 ------------------------------TTTA-C-ACTTA---TCTGC-TG-TGTCTCCTTtc-----------a--------aa---ca-----------------a------a----a--------gaac-aa---taa--a-t
i Ictidomys_tridecemlineatus.JH393315.1                 I 9 C 0
s Indri_indri.k141_1884019                                    359 61 -      2196 CA-CTG-----C--AAG-AA-AT---AAAGTGAT-C-ATTTA---TCCGC-T-CCATCTCCTTCC-----------A--------AA---TA-----------------A------A----A-----------G-AA---TAA--A-T
i Indri_indri.k141_1884019                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               6405 63 +     17520 AA-AT------T--AAG-AA-AT---AAAGTGAT-A-ATTTA---TCTGC-T-GAATCTCTTTTC-----------C---------A--AAA-----------------A------C----A--------GAAC-AA---TGA--A-T
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8562698 50 +  11848649 ---------------------------AAGTAAT-C-ACTTA---TTTAGTG--CATCtccttta-----------a--------aa---tt-----------------a------a----a--------gaaa-ta---taa--g-t
i Jaculus_jaculus.JH725517.1                            I 9 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               21237 64 +     37189 AA-ATG-----T--AAG-AA-AT---AAAGTGAT-A-ATTTA---TCTGC-T-GAATCTCTTTTC-----------C---------A--AAA-----------------A------C----A--------GAGC-AA---TAA--A-T
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          47139 64 -    147782 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TATGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   111158 64 -    115756 AA-ATA-----T--AAG-AA-AT---AAAGTGAT-C-ATTTA---TCTGC-T-GAGTCTTTGTAA-----------A--------AA---TA-----------------A------A----A--------GAAC-AA---TAA--A-T
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258404172 61 - 285822530 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-ATTTA---TCTGC-T-CTATCTCCTTCC-----------A--------AA---TA-----------------A------A----A-----------G-AA---TAA--A-T
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        21065 61 +     39228 CA-CTA-----T--AAG-AA-AT---AAAGTGAT-C-ATTTA---TCTGC-T-CCATCTCCTTCC-----------A--------AA---TA-----------------A------A----A-----------G-AA---TAA--A-T
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            50438 61 +     63517 CA-CTA-----T--AAG-AA-AT---AAAGTGAT-C-ATTTA---TCTGC-T-CCATCTCCTTCC-----------A--------AA---TA-----------------A------A----A-----------G-AA---TAA--A-T
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        75659 61 +    116806 CA-CTA-----T--AAG-AA-AT---AAACTGAT-C-ATTTA---TCTGC-T-CCATCTCCTTCC-----------A--------AA---TA-----------------A------A----A-----------C-AA---TAA--A-T
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     28703 61 -     33031 CG-CTA-----T--AAG-AA-AT---AAAGTGAT-C-ATTTA---TCTGC-T-CCATCTCCTTCC-----------A--------AA---TA-----------------A------A----A-----------G-AA---TAA--A-T
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3082953 64 -   3498232 aa-atg-----t--aag-aa-at---aaagtGAT-C-ATTTA---TCTGC-T-GAAtctctttcc-----------a--------aa---ta-----------------a------a----a---gtA-----C-AA---TAA--A-T
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    10186 26 +     22452 ----------------------------------------------------------TCCTTTC-----------A--------AA---TA-----------------A------A----A-------TGA-C-AA---TAA--A-T
i Lepus_americanus.LepAme_scaffold_62849                I 29 C 0
s Lipotes_vexillifer.KE558548.1                            133574 64 +   3060487 aa-atg-----t--aag-aa-at---aaagtGAT-A-ACTTA---TCTGC-T-GAATCTCTTTTC-----------C---------A--AAA-----------------A------C----A--------GAGC-AA---TAA--A-T
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19244767 64 +  19376315 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            7817 50 +     84689 CA-CTG-----T--AAG-AA-A-----AAATGAT-C-ATTTA---TCTCC-T-C---------CC-----------A--------AA---TA-----------------A------A----A-----------C-AA---TAA--A-T
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3775568 50 +   6799190 CA-CTG-----T--AAG-AA-A-----AAATGAT-C-ATTTA---TCTCC-T-C---------CC-----------A--------AA---TA-----------------A------A----A-----------C-AA---TAA--A-T
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20588423 65 -  62548349 aa-ata-----t--aaa-aacac---aaaacaat-c-atTTA---TCTGC-T-AAGCTTCCTTcc-----------a--------aa---ta-----------------a------a----a--------gaat-aa---taa--a-t
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11084310 64 +  39895028 aa-atg-----t--aag-aa-at---aaagtGAT-C-ATTCA---TCTGC-T-GAATCTCCTTCC-----------A--------AA---TA-----------------A------A----A--------GTAC-CA---TAA--A-T
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             16454 64 +     74745 CA-CTG-----T--AAG-AA-AT---ACAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12702960 64 +  12821369 CA-CTG-----T--AAG-AA-AT---ACAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               5056 64 +      6569 CA-CTG-----T--AAG-AA-AT---ACAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           43358 64 +     63263 CA-CTG-----T--AAG-AA-AT---ACAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_1068107                               11934 64 +     12679 CA-CTG-----T--AAG-AA-AT---ACAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                1507 64 +      3017 CA-CTG-----T--AAG-AA-AT---ACAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  43119 64 -     79256 CA-CTG-----T--AAG-AA-AT---ACAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196032037 64 + 196197964 CA-CTG-----T--AAG-AA-AT---ACAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGc-----------a--------aa---ta-----------------a------a----agaa--------c-aa---taa--a-t
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11442143 64 +  11645122 CA-CTG-----T--AAG-AA-AT---ACAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTgc-----------a--------aa---ta-----------------a------a----agaa--------c-aa---taa--a-t
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   2066 64 -     46448 CA-CTG-----T--AAG-AA-AT---ACAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                1897 64 -      3617 CA-CTG-----T--AAG-AA-AT---ACAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 12229 64 -     55006 CA-CTG-----T--AAG-AA-AT---ACAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43837266 64 +  43892939 CA-CTG-----T--AAG-AA-AT---ACAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                4488 64 -      5978 CA-CTG-----T--AAG-AA-AT---ACAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               2071 64 -     27140 CA-CTG-----T--AAG-AA-AT---ACAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43433927 64 -  43563597 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4446753 64 -   4543643 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTGA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            143687 62 +    252755 aa-ttg-----t--aag-aa-at---aaaataat-t-atttg---tttgc-c---ATCTCCttcc-----------a--------aa---ta-----------------a------a----a--------gaac-aa---taa--a-c
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             33761 62 +     58827 aa-ttg-----t--aag-aa-at---aaaataat-c-atttg---tttGC-C---ATCCCcttcc-----------a--------aa---ta-----------------a------a----a--------gaac-aa---taa--a-c
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36871032 45 +  64221397 --------------------------------AT-C-ACTTA---TCTAC-TG-TGTCTCCTTTc-----------a--------aa---ca-----------------a------a----a--------gaac-aa---taa--a-t
i Marmota_marmota.CZRN01000005.1                        I 7 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       61845 63 -    234502 -A-ATG-----T--AAG-CA-AT---AAAGTGAT-C-ATTTA---ACTGC-C-GAATCTCCTTCC-----------A--------AA---CA-----------------A------A----A--------GAAC-AA---TAA--A-T
i Megaderma_lyra.MegLyr_scaffold_3562                   I 1 C 0
s Mellivora_capensis.MelCap_flattened_line_1828            226226 64 -    226874 AA-GTG-----T--AAG-AA-AT---AAAGTGAT-C-ATTTA---TCTGC-T-GAATCTCTTTCC-----------A--------AA---TA-----------------A------A----A---ATA-----C-AA---TAA--A-T
i Mellivora_capensis.MelCap_flattened_line_1828         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233                9152 57 +     15977 ----------------C-AAAAA---ATGTTTAT-C-ATTCA---TCTGCTG--CATTTCCTTTC-----------A--------GA---CA-----------------A------A----A-------GGA-A-AA---TTA--A-T
i Meriones_unguiculatus.MerUng_scaffold_52233           I 4 C 0
s Mesocricetus_auratus.KB708139.1                         1043933 56 -  26018355 ----------------C-AA-AA---CTGTTTAT-C-ATTCA---TCTGCTG--CATCTCCTTtc-----------a--------ga---ca-----------------a------a----a--------ggaa-aa---taa--a-t
i Mesocricetus_auratus.KB708139.1                       I 4 C 0
s Mesoplodon_bidens.MesBid_scaffold_183284                   1274 64 +      2166 AA-ATA-----T--AAG-AA-AT---AAAGTGAT-A-ATTTA---TCTGC-T-GAATCTCTTCTC-----------C---------A--AAA-----------------A------C----A--------GAGC-AA---TAA--A-T
i Mesoplodon_bidens.MesBid_scaffold_183284              C 0 C 0
s Microcebus_murinus.CM007691.1                          16507291 61 +  47401472 CA-CTA-----C--AAG-AA-AT---AAAGTGAT-C-ATTTA---TCTGC-T-CCATCTCTTTCC-----------A--------AC---TA-----------------A------A----G-----------G-AA---TAA--A-T
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  28592 65 -     48017 AA-AC----ATG--TAA-GA-AC---CAAATAAT-C-AACTA---TCTGC-T-CAATCTCCTTCC-----------A--------AA---TA-----------------A------A----T---TAA-----C-AA---CAA--A-T
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               20244 63 -     32043 -A-ATG-----T--AAG-AA-AT---AAAGAGAT-C-GTTTA---TCAGC-T-AAGTCTCCTTAC-----------A--------AA---CA-----------------A------A----A--------GAAC-AC---TAA--A-T
i Micronycteris_hirsuta.MicHir_scaffold_37978           I 1 C 0
s Microtus_ochrogaster.CM001673.1                        22817050 56 -  98408828 ----------------c-aa-aa---atatttat-c-attca---tCTGCTG--GATCTCCTATC-----------A--------CA---CA-----------------G------A----A--------GGGA-AA---TAA--A-T
i Microtus_ochrogaster.CM001673.1                       I 4 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8207016 64 +  10048721 aa-ttt-----t--aag-aa-at---aaagtgat-C-ATTTA---TCTGC-T-GAATCTTcttac-----------a--------aa---ta-----------------a------a----a--------gaac-aa---taa--a-t
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            31687 64 +     45743 AA-TTT-----T--AAG-AA-AT---AAAGTGAT-C-ATTTA---TCTGC-T-GAATCTTCTTAC-----------G--------AA---TA-----------------A------A----A--------GAAC-AA---TAA--A-T
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        32586 64 +     34273 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         8278 42 -    104932 -------------------------------------ATTTA---TCTGC-T-GAATCTCTTTCC-----------A--------AA---TA-----------------A------A----A--------GTAC-AA---TAA--A-T
i Mirounga_angustirostris.MirAng_flattened_line_8852    I 21 C 0
s Mirza_zaza.k141_226143                                     2696 61 +      8497 CT-CTA-----C--AAG-AA-AT---AAAGTGAT-C-ATTTA---TCTGC-T-CCATCTCTTTCC-----------A--------AA---TA-----------------A------A----A-----------G-AA---TAA--A-T
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 144001 64 +    154973 AA-ATG-----T--AAG-AA-AT---AAAGTGAT-A-ATTTA---TCTGC-T-GAATCTCTTTTC-----------C---------A--AAA-----------------A------C----A--------GAGC-AA---TAA--A-T
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                158782 63 +    265003 -T-ATG-----T--AAG-AA-AT---AAAGAAAT-C-ACTTC---TCTGC-T-AAATCTCCTTAC-----------A--------AA---TG-----------------A------A----A--------GAAC-AA---TAA--A-C
i Mormoops_blainvillei.MorMeg_scaffold_2952             I 1 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 2173 70 -      4346 AA-ATG-----T--AAG-AA-AT---AAAGTGAT-G-ATTTA---TCTGC-T-GAATCTCTTTTC-----------C--------AA--AAA-----------------A------A----A---AAAAAGAGC-AG---TAA--A-T
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  141878 64 -    168139 AA-ATG-----T--AGG-AA-AT---AAAGTGAT-C-ATTTA---TCTGC-T-GAATCTCCTTAC-----------A--------AA---TA-----------------A------A----G--------GAAG-AA---TAA--A-T
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          16666 64 -    100666 AA-ATA-----T--AAG-AA-AT---AAAGTGAT-C-ATTTA---TCTGC-T-GAAACTTCTTAC-----------A--------AA---TA-----------------A------A----A--------GAAC-AA---TAA--A-T
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70763538 56 +  92629107 ----------------C-AA-CA---TTGTTTAT-C-ATTCA---TCTGCTG--CATCTCCtttc-----------a--------ga---ca-----------------a------a----a--------agaa-aa---taa--a-t
i Mus_caroli.LT608236.1                                 I 4 C 0
s Mus_musculus.chr16                                     75486602 54 +  98207768 ----------------C-AA-CA---TTGTTTAT-C-ATTCA---TCTGCTG--CATCTCCTTTC-----------A--------GA---TG-----------------G------A----A---AA-----CA-A-----AA--A-T
i Mus_musculus.chr16                                    I 4 C 0
s Mus_pahari.LT608305.1                                  67552762 56 +  89017189 ----------------C-AA-CA---TTTTTTAT-C-ATTCA---TCTGCTG--CATCTCCTTtc-----------a--------ga---ca-----------------a------a----a--------ggaa-aa---taa--a-t
i Mus_pahari.LT608305.1                                 I 4 C 0
s Mus_spretus.CM004110.1                                 74327775 56 +  97876770 ----------------C-AA-CA---TTGTTTAT-C-ATTCA---TCTGCTG--CATCTCCTTTC-----------A--------GA---CG-----------------G------G----A---AAA-----A-AA---CAA--A-T
i Mus_spretus.CM004110.1                                I 4 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              8300 63 +     98495 -A-CTG-----T--AAA-AG-GC---AAAGTTAT-C-ATTTA---TTTAT-GA-CTCCTCCTTTT-----------A--------AA---TG-----------------A------A----A--------GAAC-AA---TAA--A-T
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 1 C 0
s Mustela_putorius.JH417978.1                             4421118 64 -  28371801 AA-GTG-----T--AAG-AA-AT---AAAGTGAT-C-ATTTA---TCTGC-T-GAatctctttcc-----------a--------aa---ta-----------------a------a----a--------atac-aa---taa--a-t
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     87279 24 -    117718 ------------------------------------------------------------CTGTA-----------A--------AC---TG-----------------A------C----A--------GAAC-AC---TAA--A-T
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 28 C 0
s Myotis_brandtii.KE161952.1                               964993 64 +   8389877 aa-ata-----t--aag-aa-at---aaagtgAT-C-ACTTA---TCTGC-T-GAATCTTcttac-----------a--------aa---ta-----------------a------a----a--------gaac-aa---taa--a-t
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5016675 64 +   6462685 ga-ata-----t--aag-aa-at---aaagTGAT-C-ATTTA---TCTTC-C-GAATCTTCttac-----------a--------aa---ta-----------------a------a----a--------gaac-aa---taa--a-t
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3462579 64 -   3747815 aa-ata-----t--aag-aa-at---aaagtgAT-C-ACTTA---TCTGC-T-GAATCTTcttac-----------a--------aa---ta-----------------a------a----a--------gaac-aa---taa--a-t
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         7768 64 +     66751 AA-ATA-----T--AAA-AA-GT---AAAGTGAT-C-ATTTA---TCTTC-C-AAATCTTCTTAC-----------A--------AA---TA-----------------A------A----A--------GAAC-AA---TAA--A-T
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             2642 63 -      8794 AA-ATA-----T--GAAAAA-AT---CAAGTGAT-C-TTTTA---TCTAC-T---GTCTCCTTCC-----------A--------AA---TG-----------------A------A----A---A----GA-A-AA---TAA--A-T
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 I 3
s Nannospalax_galili.KL204535.1                           2057015 63 +   2354432 -a-ctg-----t--ttt-aa-aa---aaaatggt-a-attCA---TCTGTTG--CATCTCCtttc-----------a--------aa---ca-----------------a------a----a--------ggaa-aa---taa--a-t
i Nannospalax_galili.KL204535.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               4978 51 +     48152 --------------------------AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Nasalis_larvatus.k141_153429                          I 9 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4481856 64 -  14209539 aa-atg-----t--aag-aa-at---aaaatgat-c-attta---tCTGC-T-GAAtctctttcc-----------a--------aa---ta-----------------a------a----a---gtA-----C-AA---TAA--A-T
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3948612 64 -   4490290 aa-atg-----t--aag-aa-at---aaagtGAT-A-ATTTA---TCTGC-T-GAATCTCTTTTC-----------C---------A--AAA-----------------A------C----A--------GAGC-AA---TAA--A-T
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  46893 65 +     94413 -A-ATG-----TGTAAA-AA-AT---AGAGGGAT-T-ATTTG---TCTAC-T-AAATATCCTTAC-----------A--------AA---TA-----------------A------G----A--------GAAC-AA---TAA--A-T
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1223136                          10758 64 -     11253 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-TTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Nomascus_annamensis.k141_1223136                      C 0 C 0
s Nomascus_concolor.k141_468488                              1401 64 -      1482 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-TTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Nomascus_concolor.k141_468488                         C 0 N 0
s Nomascus_gabriellae.k141_906566                            1390 64 -      2544 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-TTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             21864 64 -  18771707 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-TTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_844529                                  1139 64 +      2124 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-TTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Nomascus_siki_a.k141_844529                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                27303 64 +   3668941 aa-atg-----t--aag-aa-at---aaagtGAT-C-ATTCA---TCTGC-T-GAATCTCCTTCC-----------A--------AA---TA-----------------A------A----A--------GTAC-CA---TAA--A-T
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65564146 59 -  95554990 CA-CTG-----T--AAG-AA-A-----AAGTGAT-C-ATTTA---TCTCC-T-CTATCTCCTTCC-----------A--------AA---TA-----------------A------A----A-----------C-AA---TAA--A-T
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                             991 59 +      6470 CA-CTG-----T--AAG-AA-A-----AAGTGAT-C-ATTTA---TCTCC-T-CTATCTCCTTCC-----------A--------AA---TA-----------------A------A----A-----------C-AA---TAA--A-T
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65666515 59 +  89412551 CA-CTG-----T--AAG-AA-A-----AAGTGAT-C-ATTTA---TCTCC-T-CTATCTCCTTCC-----------A--------AA---TA-----------------A------A----A-----------C-AA---TAA--A-T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4993144 51 -  23139505 --------------------------AAGGTGAT-A-CTTTA---TCTCC-T-GTATTTCAtctg-----------a--------aa---ta-----------------a------a----a--------gaac-aa---tAC--A-T
i Ochotona_princeps.JH802095.1                          I 12 C 0
s Odobenus_rosmarus.KB229369.1                             676520 53 -   3126709 ---------------------at---aatatgaT-C-ATTTA---TCTGC-T-GAAtctctttcc-----------a--------aa---ta-----------------a------a----a---gtA-----C-AA---TAA--A-T
i Odobenus_rosmarus.KB229369.1                          I 7 C 0
s Odocoileus_virginianus.KZ101650.1                       1077300 52 +   1425656 AA-ATG-----T--AAG-AA-AT---AAAGTGAT-G-ATTTA---TCTGC-T-Gaatctcttttc-----------t--------aaa--aa-----------------a--------------------------------------
i Odocoileus_virginianus.KZ101650.1                     C 0 I 16
s Okapia_johnstoni.LVCL01S0017931.1                         34461 52 +     78940 AA-ACG-----T--AAG-AA-AT---AACGTGAT-G-ATTTA---TCTGC-T-GAatctcttttc-----------c--------aaa--aa-----------------a--------------------------------------
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 I 15
s Ondatra_zibethicus.OndZib_scaffold_6821                  122329 56 +    145789 ----------------C-AA-AA---ATATTTAT-C-ATTCA---TCTGCTG--GATCTCCTTTC-----------A--------GA---CA-----------------A------A----A-------GGA-A-AA---TAA--A-T
i Ondatra_zibethicus.OndZib_scaffold_6821               I 4 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  34088 56 +     62360 ----------------C-AA-AG---ATATTTAT-C-ATTCA---TCTGCTG--CATTTCCTTTC-----------A--------GA---CA-----------------A------A----A-------GGA-A-AA---TAA--A-T
i Onychomys_torridus.OnyTor_scaffold_12578              I 4 I 4
s Orcinus_orca.KB316965.1                                 7222299 64 -   7562323 aa-atg-----t--aag-aa-at---aaagtGAT-A-ATTTA---TCTGC-T-GAATCTCTTTTC-----------C---------A--AAA-----------------A------C----A--------GAGC-AA---TAA--A-T
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              40674 64 -     66828 AA-ATA--CATT--AAA-AA-AA---GAAGCAAT-C-ATTCA---TCTGC-T-GAATCTCCT--------------G--------AA---TA-----------------A------A----A--------GAAC-AA---TAA--A-T
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141872806 64 + 163896628 AG-CGG-----T--AAG-AA-AT---AATGTGTT-C-ATTTA---TCTCC-T-Gtatctcctttc-----------a--------aa---ta-----------------a------a----a--------tgac-aa---taa--a-t
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      304642 64 -    505867 aa-atg-----t--aag-aa-at---aaagtGAT-C-ATTCA---TCTGC-T-GAATCTCCTTCC-----------A--------AA---TA-----------------A------A----A--------GTAC-CA---TAA--A-T
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       36156 61 +     38679 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-ATTTA---TCCCC-T-CTATCTCCTTCC-----------A--------AG---TA-----------------A------A----A-----------T-AA---TAA--A-T
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18005597 61 -  38779656 CA-GTA-----T--AAG-AA-AT---ACAGTGAT-C-ATTTA---TCCCC-T-CTATCTCCTtcc-----------a--------ag---ta-----------------a------a----a-----------t-aa---taa--a-t
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134074874 76 - 275406953 aa-atg-----t--aag-aa-at---aaagtGAT-G-ATTTA---TCTGC-T-GAATctctcccc-----------c--------ct--cac--------------cccc------cggA-A---AAAAAGAGC-AG---TAA--A-T
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      76088 76 +    140051 AA-ATG-----T--AAG-AA-AT---AAAGTGAT-G-ATTTA---TCTGC-T-GAATCTCTCCCC-----------C--------CT--CAC--------------CCCC------CGGA-A---AAAAAGAGC-AG---TAA--A-T
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127571617 64 - 205426864 CA-CTG-----T--AAG-AA-AT---GAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCttgc-----------a--------aa---ta-----------------a------a----agaa--------t-aa---taa--a-t
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120148770 64 - 196562556 CA-CTG-----T--AAG-AA-AT---GAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCttgc-----------a--------aa---ta-----------------a------a----agaa--------t-aa---taa--a-t
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  31326 75 +    295523 AA-TTG-----T--AGG-AA-AT---AAAGTTAT-C-ATTTA---TCTGC-T-GAATCTCCTTACAAATCTCTTACA--------AA---TA-----------------A------G----A--------GAAC-AA---TAA--A-T
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3634927 75 +  18214204 AA-TTG-----T--AGG-AA-AT---AAAGTTAT-C-ATTTA---TCTGC-T-GAATCTCCTTACAAATCTCTTACA--------AA---TA-----------------A------G----A--------GAAC-AA---TAA--A-T
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5024708 75 -   6340057 AA-TTG-----T--AGG-AA-AT---AAAGTTAT-C-ATTTA---TCTGC-T-GAATCTCCTTACAAATCTCTTACA--------AA---TA-----------------A------G----A--------GAAC-AA---TAA--A-T
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1063732 79 -   1292953 aa-atg-----t--aag-aa-at---aaaGTGAT-G-ATTTA---TCAGC-T-GAATCtctcccc-----------c--------cca--ac-----------acacaca------c-acat---acaaaaagc-aG---TAA--A-T
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188152711 64 - 188283584 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGc-----------a--------aa---ta-----------------a------a----agaa--------c-aa---taa--a-t
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            48923 64 +     76494 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47510108 64 +  47705337 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 64090 64 -    104429 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  13876 64 -     29451 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                34279 64 +     35859 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    112654 64 -    135482 AA-ATA-----T--AGG-AA-AT---AAAGTGAT-C-ATTTA---TCTGC-T-GAGTCTCCTTAC-----------A--------AA---TA-----------------A------A----G--------GAAC-AA---TAA--A-T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           2202 61 -     23713 CA-CTG-----T--AAA-GA-AT---AAAGTTAT-C-ATTTC---TCTCC-T-CTATCTCCTTCC-----------A--------AA---TA-----------------A------A----A-----------C-AA---TAA--A-T
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            21500 61 -     27972 CA-CTG-----T--AAA-GA-AT---AAAGTTAT-C-ATTTG---TCTCC-T-CTATCTCCTTCC-----------A--------AA---TA-----------------A------A----A-----------C-AA---TAA--A-T
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      40105 47 -     45160 -A-CTG-----T--AAG-AA-AT---AGAGTGAT-C-ATTAA---CCCAC-G--TATCTCCTTTC-----------A--------AA---T---------------------------------------------------------
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 I 13
s Peromyscus_maniculatus.KI615518.1                       4947263 56 -   8017169 ----------------C-AA-AG---ATATTTAT-C-ATTCA---TCTGCTG--CATTTCCTTtc-----------a--------ga---ca-----------------a------a----a--------ggaa-aa---taa--a-t
i Peromyscus_maniculatus.KI615518.1                     I 4 I 4
s Petromus_typicus.PetTyp_scaffold_33007                     9417 30 -     36578 -A-ATT-----T--ATA-AA-AT---CAAATATT-C-ACTTG---ACTG---------------------------------------------------------------------------------------------------
i Petromus_typicus.PetTyp_scaffold_33007                C 0 I 22
s Phocoena_phocoena.PhoPho_flattened_line_11948            118914 64 -    122454 AA-ATG-----T--AAG-AA-AT---AAAGTGAT-A-ATTTA---TCTGC-T-GAATCTCTTTTC-----------C---------A--AAA-----------------A------C----A--------GAGC-AA---TAA--A-T
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           1969 64 -      3310 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TCTGG-T-CCATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       21875 64 -     82327 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TCTGG-T-CCATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           18627 64 +     19957 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TCTGG-T-CCATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26736636 64 +  26888534 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TCTGG-T-CCATCTCCTTgc-----------a--------aa---ta-----------------a------a----agaa--------c-aa---taa--a-t
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            93766 62 +    112873 AA-ATA-----T----G-AA-AT---AAAGTGAT-C-TTTTA---TCTGC-T-GAATCTTCTTAC-----------A--------AA---TA-----------------A------A----A--------GAAC-AA---TAG--A-T
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             40617 64 -     61926 CA-CTA-----T--AAG-AA-AT---AAACTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        22046 64 +     78826 CA-CTA-----T--AAG-AA-AT---AAACTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              5997 64 -     15800 CA-CTA-----T--AAG-AA-AT---AAACTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                         9195 64 -     16101 CA-CTA-----T--AAG-AA-AT---AAACTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          2504 64 +      9673 CA-CTA-----T--AAG-AA-AT---AAACTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13471498 64 -  19735023 CA-CTA-----T--AAG-AA-AT---AAACTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           10406 64 -     31692 CA-CTA-----T--AAG-AA-AT---AAACTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           2983 65 +     21690 AC-ATG-----T--AAG-AA-AT---ACAGTGAT-AAATTCA---ACTGC-T-GAATCTCTTTTC-----------C---------A--AAA-----------------A------C----A--------GAGC-AA---TAA--A-T
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       19843 64 +     44506 CA-CCG-----T--AAG-AA-AC---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        20053 64 +     67491 CA-CCG-----T--AAG-AA-AC---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      10298 64 -     98129 CA-CCG-----T--AAG-AA-AC---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     19899 64 +    147771 CA-CCG-----T--AAG-AA-AC---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        20149 64 -     23762 CA-CCG-----T--AAG-AA-AC---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                           615 64 -     55515 CA-CCG-----T--AAG-AA-AC---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         19968 64 +    152463 CA-CCG-----T--AAG-AA-AC---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      6728 64 +      8943 CA-CCG-----T--AAG-AA-AC---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                          9688 64 +    134592 CA-CCG-----T--AAG-AA-AC---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          20278 64 -     75465 CA-CCG-----T--AAG-AA-AC---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              184174 51 -    373494 --------------------------AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGc-----------a--------aa---ta-----------------a------a----agaa--------c-aa---taa--a-t
i Pongo_abelii.NDHI03003816.1                           I 11 C 0
s Pongo_pygmaeus.ctg62                                   19804081 51 +  19899266 --------------------------AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Pongo_pygmaeus.ctg62                                  I 11 C 0
s Presbytis_comata.k141_672698                               2207 64 -     15069 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              2341 64 +     14865 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---CCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                73509 61 +     78963 -G-ATA-----T--AAA-AAA-T---AA---AAT-C-ATTTA---TCTGT-G-AAATCTCCTTCC-----------A--------AA---TA-----------------A------A----A---AAA----CC-AA---TAA--A-T
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6845547 61 +  12164890 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-ATTTA---TCTGC-T-CTATCTCCttcc-----------a--------aa---ta-----------------a------a----a-----------g-aa---taa--a-t
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    664166 59 -   2312742 ---CNN-----N--NNN-NN-NN---NNNNNNNN-N-NNNNN---NNNNN-N-NNNNNNNNNNNN-----------N--------NN---NN-----------------N------N----N-----------N-NN---NNN--N-N
i Propithecus_coquerelli.NW_012147997.1                 I 91 C 0
s Propithecus_coronatus.k141_1353159                          692 61 +     11805 CA-CTA-----C--AAG-AA-AT---AAAGTGAT-C-ATTTA---TCTGC-T-CCATCTCCTTCC-----------A--------AA---TA-----------------A------A----A-----------G-AA---TAA--A-T
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           40028 61 +     52369 CA-CTA-----C--AAG-AA-AT---AAAGTGAT-C-ATTTA---TCTGC-T-CCATCTCCTTCC-----------A--------AA---TA-----------------A------A----A-----------G-AA---TAA--A-T
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         32416 61 -     44753 CA-CTA-----C--AAG-AA-AT---AAAGTGAT-C-ATTTA---TCTGC-T-CCATCTCCTTCC-----------A--------AA---TA-----------------A------A----A-----------G-AA---TAA--A-T
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            14337 61 +     27322 CA-CTA-----C--AAG-AA-AT---AAAGTGAT-C-ATTTA---TCTGC-T-CCATCTCCTTCC-----------A--------AA---TA-----------------A------A----A-----------G-AA---TAA--A-T
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       13976 61 -     53241 CA-CTA-----C--AAG-AA-AT---AAAGTGAT-C-ATTTA---TCTGC-T-CCATCTCCTTCC-----------A--------AA---TA-----------------A------A----A-----------G-AA---TAA--A-T
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         36248 61 -     48185 CA-CTA-----C--AAG-AA-AT---AAAGTGAT-C-ATTTA---TCTGC-T-CCATCTCCTTCC-----------A--------AA---TA-----------------A------A----A-----------G-AA---TAA--A-T
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           30691 56 +     77221 ----------------C-AA-AA---ATGTTTAT-C-ATTCA---TCTGCTG--CATCTCCtttc-----------a--------ga---ca-----------------a------a----a--------gaaa-aa---tta--a-t
i Psammomys_obesus.NESX01026517.1                       I 4 C 0
s Pteronotus_parnellii.KE867983.1                            1447 63 -     27784 -a-atg-----t--aag-aa-at---aaaggGAT-C-ATATA---TCTGC-T-AACTCTCcttac-----------a--------aa---tg-----------------a------a----a--------gaac-aa---taa--a-t
i Pteronotus_parnellii.KE867983.1                       I 1 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        243211 64 -    344369 AA-GTG-----T--AAG-AA-AT---AAAGTGAT-C-ATTTA---TCTGC-T-GAATCTCTTTCC-----------A--------AA---TA-----------------A------A----A---ATA-----C-AA---TAA--A-T
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Puma_concolor.QAVW01000427.1                          131531290 75 - 161321710 AA-TTG-----T--AGG-AA-AT---AAAGTTAT-C-ATTTA---TCTGC-T-GAATCTCCTTACAAATCTCTTACA--------AA---TA-----------------A------G----A--------GAAC-AA---TAA--A-T
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             26332 64 +     56732 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6802823 64 +   6970761 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             2216 64 +     18040 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                13381 71 +     68503 AA-ATG-----T--AAG-AA-AT---AAAGTGAT-G-ATTTA---TCTGC-T-GAATCTCTTTCC-----------T--------AA--AAA-----------------A-----AA----A---AAAAAGAGC-AG---TAA--A-T
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13912669 56 +  90463843 ----------------C-AA-AA---TTGCTTAT-C-CGTCA---TCTGCTA--TATCTCCTTtc-----------a--------ga---ca-----------------a------a----a--------ggaa-aa---taa--a-t
i Rattus_norvegicus.chr11                               I 4 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1785376 63 +   2252614 ----TG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TCTGC-T-GATTCTCcctcc-----------a--------aa---ta-----------------a------a----a--------taac-aa---aaagat-t
i Rhinolophus_sinicus.LVEH01000179.1                    I 179 C 0
s Rhinopithecus_bieti.k119_102124                           12769 64 -     14454 CA-CTG-----T--AAG-AA-AT---AAAGTGAC-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206374095 64 - 206558726 CA-CTG-----T--AAG-AA-AT---AAAGTGAC-C-CTTTA---TCTGG-T-CTATCTCCTTGc-----------a--------aa---ta-----------------a------a----agaa--------c-aa---taa--a-t
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44851743 64 -  45163003 CA-CTG-----T--AAG-AA-AT---AAAGTGAC-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       5166 90 +     12214 AA-ATG-----T--AAG-AA-AT---AAAGCGAT-G-ATTTA---TCTGC-T-GAATCTCTTTTC-----------C--------AA--AAAAAGAAAGAAAGAAAGAAA------G-AAAG---AAAGAAAGC-AG---TAA--A-T
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15669731 64 -  43202129 Ta-cta-----t--gag-aa-at---aaagttaT-C-CTTTA---TCTGG-T-CTATCTCATTGC-----------A--------AA---TG-----------------A------A----AGAA--------C-GA---TAA--A-T
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        1594 64 +     34089 TA-CTA-----T--GAG-AA-AT---AAAGTTAT-C-CTTTA---TCTGG-T-CTATCTCATTGC-----------A--------AA---TG-----------------A------A----AGAA--------A-GA---TAA--A-T
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              1535 64 -     60842 TA-CTA-----T--GAG-AA-AT---AAAGTTAT-C-CTTTA---TCTGG-T-CTATCTCATTGC-----------A--------AA---TG-----------------A------A----AGAA--------A-GA---TAA--A-T
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              1630 64 +     67014 TA-CTA-----T--GAG-AA-AT---AAAGTTAT-C-CTTTA---TCTGG-T-CTATCTCATTGC-----------A--------AA---TG-----------------A------A----AGAA--------A-GA---TAA--A-T
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              1608 64 +     60816 TA-CTA-----T--GAG-AA-AT---AAAGTTAT-C-CTTTA---TCTGG-T-CTATCTCATTGC-----------A--------AA---TG-----------------A------A----AGAA--------A-GA---TAA--A-T
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 1549 64 -     76454 TA-CTA-----T--GAG-AA-AT---AAAGTTAT-C-CTTTA---TCTGG-T-CTATCTCATTGC-----------A--------AA---TG-----------------A------A----AGAA--------A-GA---TAA--A-T
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17338060 64 -  30362882 CA-CTA-----T--GAG-AA-AT---AAAGTTAT-C-CTCTA---TCTGG-C-CTATCTCCTTGC-----------A--------AA---TA-----------------G------A----AAAA--------T-GA---TAA--A-T
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         17659 64 -     62485 CA-CTA-----T--GAG-AA-AT---AAAGTTAT-C-CTCTA---TCTGG-C-CTATCTCCTTGC-----------A--------AA---TA-----------------G------A----AAAA--------C-GA---TAA--A-T
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   28946 65 -    114521 AA-ATA-----C--AAA-AA-AC---AAAAGATT-T-ATCCA---TCTGC-T-GAATTTCCTTCC-----------A--------AA---TGA----------------A------A----A--------GAAC-AA---TAA--A-T
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1527475                       24757 64 +     26421 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--G-T
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       5217 64 +     20762 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--G-T
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         38952 64 +     40653 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--G-T
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                            9509 64 -     12194 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--G-T
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     22931 64 -     27512 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--G-T
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         31950 64 -     33692 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTAGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--G-T
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   96876 56 -    120886 ----------------C-AA-AA---ATGTTTAT-C-ATTCA---TCTGCTG--CATCTCTTTTC-----------A--------GA---CA-----------------A------A----A-------GGA-A-AG---TCA--A-T
i Sigmodon_hispidus.SigHis_scaffold_11332               I 4 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            15594 58 +    739146 --------------AAG-AA-AT---AAAGGGAT-C-ATTTA---CCTGC-T-GAATATCCTTCA-----------A--------AA---TA-----------------A------A----A--------GACC-AA---TAA--A-G
i Solenodon_paradoxus.SolPar_flattened_line_1012        I 6 C 0
s Sorex_araneus.JH798170.1                               17747810 53 -  27805282 ---------------------at---aaatatat-t-gctTA---TCTTC-T-GAATCTCCTCCC-----------A--------AA---TC-----------------A------A----A--------GAAC-AG---TAA--A-T
i Sorex_araneus.JH798170.1                              I 5 C 0
s Spermophilus_dauricus.KZ294190.1                        2237109 44 +   2842873 ---------------------------------T-C-ACTTA---TCTAC-TG-TGTCTCCTTtc-----------a--------aa---ca-----------------a------a----a--------gaac-aa---taa--a-t
i Spermophilus_dauricus.KZ294190.1                      I 8 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             231979 64 -    276980 AA-ATG-----T--AAG-CA-AT---AAAGTGAT-C-ATTTA---TCTGC-T-GAATCTCCTTCC-----------A--------AG---TA-----------------G------A----A---ATA-----C-AA---TAA--A-T
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            24542 64 +     62062 AA-ATG-----T--AGG-AA-AT---AAAGTGAT-C-ATTTA---TCTGC-T-GAATCTTCTTAC-----------A--------AA---TA-----------------A------A----G--------GAAC-AA---TAA--A-T
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189269444 66 + 218635234 a--ata-----t--aag-aa-at---aaagcGGT-A-ATTTA---TCTGC-T-GAAtctctttct-----------c--------aaaaaaa-----------------a------a----g--------gagc-aa---taa--A-T
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        11887 64 -  13920577 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-TTTTA---TCTGC-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----ACAA--------C-AA---TAA--A-T
i Symphalangus_syndactylus.tarseq_24                    I 298 I 221
s Tadarida_brasiliensis.TadBra_scaffold_145589               3393 64 -      6213 AA-ATG-----T--AAG-AA-AT---GAAGCGAT-T-CTTTA---TCAGC-T-GAATCTTCTTAC-----------A--------AA---TA-----------------A------A----A--------GAAC-AA---TAA--A-T
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               12316 63 +     45698 AA-ATA-----T--GAAAAA-AT---CAAGTAAT-C-TTTTA---TCTAC-T---GTCTCCTTCC-----------A--------AA---TG-----------------A------A----A---A----GA-A-AA---TAA--A-T
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 I 3
s Tapirus_indicus.TapInd_scaffold_176                      804313 64 +   1148477 AA-ATG-----T--AAG-AA-AT---ACAGTGGT-C-ATTTA---TCTGC-C-GAGTCTCCTTCC-----------A--------AA---TA-----------------A------A----A--------GAAC-AA---TAA--A-T
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  54974 64 +     99546 AA-ATG-----T--AAG-AA-AT---ACAGTGGT-C-ATTTA---TCTGC-C-GAGTCTCCTTCC-----------A--------AA---TA-----------------A------A----A--------GAAC-AA---TAA--A-T
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               23636 64 +     42269 CA-CTG-----T--AAG-AA-AT---AAAGTAAT-C-ATTTA---TCTGT-T-CTGTCTCCTTCC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TGA--A-T
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               56952 64 +     65473 CA-CTG-----T--AAG-AA-AT---AAAGTAAT-C-ATTTA---TCTGT-T-CTGTCTCCTTCC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TGA--A-T
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194004247 64 - 194193292 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTgc-----------a--------aa---ta-----------------a------a----agaa--------c-aa---taa--a-t
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             36509 30 -     47444 -A-ATG-----T--ATA-AA-TT---CAAGTGTT-C-ACTAG---TCTG---------------------------------------------------------------------------------------------------
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 I 21
s Tolypeutes_matacus.TolMat_scaffold_269431                  1197 50 +      6782 AA-ATG-----T--GAA-AA-AT---GAAGTGAT-C-TTTGA---TCCCC-T---ATCTCCTTCC-----------A--------AA---TA-----------------A------A-------------------------------
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 I 11
s Tonatia_saurophila.TonSau_scaffold_3334                  133455 61 -    259118 -A-ATG-----T--AAG-AA-AT---A--GAGAT-C-ATTTA---TTGGT-T-AAATCTCCTTAC-----------A--------AA---TA-----------------A------A----A--------GAAC-AA---TGA--A-T
i Tonatia_saurophila.TonSau_scaffold_3334               I 1 C 0
s Trachypithecus_auratus.k141_738098                        23327 64 +     38948 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--G-T
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   17054 64 -     32910 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--G-T
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       22952 64 +     24652 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--G-T
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      1830 64 -      3559 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGGA--------C-AA---TAA--G-T
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           39776 64 -     54611 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--G-T
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       15775 63 +     17312 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TCT-G-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--G-T
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    23138 64 -     25040 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGGA--------C-AA---TAA--G-T
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          1804 64 +      3528 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGGA--------C-AA---TAA--G-T
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  48166 64 +     51589 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGGA--------C-AA---TAA--G-T
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       11342 64 +     14732 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--A-T
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       1819 64 -     28054 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--G-T
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44656614 64 -  44834318 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--G-T
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        1624 64 +      3372 CA-CTG-----T--AAG-AA-AT---AAAGTGAT-C-CTTTA---TCTGG-T-CTATCTCCTTGC-----------A--------AA---TA-----------------A------A----AGAA--------C-AA---TAA--G-T
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   2813 40 +     90398 ----------------------------------------TA---CCTTC-T-GAATCTCTTTTC-----------C--------AA--AAA-----------------A------A----A---AA---G--C-AA---TAA--A-T
i Tragulus_javanicus.TraJav_scaffold_14717              I 21 C 0
s Trichechus_manatus.JH594618.1                          16078898 64 +  31416278 aa-ata-----t--aaa-aa-ac---aaaacaat-c-aattA---TCTGC-T-AAATCTCCTTCC-----------A--------AA---TA-----------------A------A----C--------GAAT-AA---TAG--A-T
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2789029 57 -   3938065 aa-ctg-----a--aag-aa-at---aaagcaat-c-aTTTA---TCTGC-C-TTTTCTCCTTCT-----------A--------AA---TA-----------------A------G----A--------GAAC--------------
i Tupaia_chinensis.KB320831.1                           C 0 I 1
s Tupaia_tana.TupTan_flattened_line_68454                    1537 57 +     13056 AA-CTG-----A--AAG-AA-AT---AAAGCAAT-C-ATTTA---CTTGC-T-GTATCTCCTTCT-----------A--------AA---TA-----------------A------G----A--------GAAC--------------
i Tupaia_tana.TupTan_flattened_line_68454               C 0 I 1
s Tursiops_truncatus.MRVK01000923.1                      69311017 64 -  96451834 aa-atg-----t--aag-aa-at---aaagtGAT-A-ATTTA---TCTGC-T-GAATCTCTTTTC-----------C---------A--AAA-----------------A------C----A--------GAGC-AA---TAA--A-T
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 24139 60 -     25548 AA-ATG-----C--AAA-AC-AT---AAA------T-ATCCA---TCTGC-T-GAATTTCCTTAC-----------A--------AA---TGA----------------A------A----A--------GAAC-AA---TAA--A-T
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6511558 64 +  28682327 aa-atg-----t--aag-aa-at---aaagtGAT-C-ATTTA---TCTGC-T-GAATCTCCTTCC-----------A--------AA---TA-----------------A------A----A--------GTAC-Aa---taa--a-t
i Ursus_maritimus.KK498671.1                            C 0 I 213
s Varecia_rubra.k141_432109                                  2386 61 -     20643 CA-CTG-----T--AAG-AA-GT---AAAGTGTT-C-ATTTA---TCTGC-T-CTATCTCCTTCC-----------A--------AA---TA-----------------A------A----A-----------G-AA---TAA--A-T
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             21930 61 -     33872 CA-CTG-----T--AAG-AA-GT---AAAGTGTT-C-ATTTA---TCTGC-T-CTATCTCCTTCC-----------A--------AA---TA-----------------A------A----A-----------G-AA---TAA--A-T
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1522244 67 -   2331223 aa-atg-----t--agg-aa-at---aaaGTGAT-AAATTTA---TCTGC-T-AAATCTCTTTCc-----------c--------aaaa-aa-----------------a------a----a--------gagc-aa---taa--a-t
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                134711 63 -    281493 AA--TG-----T--AAG-AA-AT---AAAGTGAT-C-ATTCA---TCTGG-T-GAATCTCCTTCC-----------A--------AA---TA-----------------A------A----A--------GTAC-CA---TAA--A-T
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       124209 47 -    134049 ------------------------------GAAT-C-ACTTA---TCTAC-TG-TATCTCCTTTC-----------A--------AG---CA-----------------A------A----A--------GAAC-AA---TAA--A-T
i Xerus_inauris.XerIna_scaffold_7898                    I 9 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        211238 64 -    227762 AA-ATG-----T--AAG-AA-AT---AATGTGAT-C-ATTTA---TCTGC-T-GAATCTCTTTCC-----------A--------AA---TA-----------------A------A----A--------GTAC-AA---TAA--A-T
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     12428 51 -     20485 --------------------------AAACTAAT-C-ATTTA---TTTGGTG--CATCTCCTTTA-----------A--------AA---TT-----------------A------A----A--------GATA-CA---TAA--G-C
i Zapus_hudsonius.ZapHud_scaffold_64392                 I 10 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           4516 64 -      8775 AA-ATG-----T--AAG-AA-AT---AAAGTGAT-A-ATTTA---TCTGC-T-GAATCTCTTCTC-----------C---------A--AAA-----------------A------C----A--------GAGC-AA---TAA--A-T
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                16872 121 +    109198 I
e Pteropus_vampyrus.KN525959.1                             601523 113 -   3946241 I
e Pteropus_alecto.KB031157.1                             13243570 113 -  17261082 I
e Hipposideros_galeritus.HipGal_scaffold_104691              5257 10 -      9143 I
e Hipposideros_armiger.JXIK01001085.1                      276098 10 -    477199 I
e Eidolon_helvum.KE772537.1                                  9773 114 +     24177 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16291  1 -    119109 I
e Octodon_degus.JH651621.1                                3678743 1836 +  10294119 I
e Dolichotis_patagonum.DolPat_scaffold_14102                33375  0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             56104 16 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                14631 16 +     26546 I
e Cavia_tschudii.CavTsc_scaffold_488                       173989  0 +    436027 C
e Cavia_porcellus.DS562889.1                             15795798  0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15783848 16 -  24422027 I

a score=0.000000
s hg38.chr4_GL000008v2_random                                8938 38 +    209709 T-CT--GT--ACTATT-ATGA----AA-T---ATAAGAGCTTG--A-A-A-ATTTTT
s Acinonyx_jubatus.LLWD01000356.1                         2031025 37 +   3721120 C-CT--AT--ACTCTT-GTGG----AA-T---ATAGgaacaag--a-a-a-acatt-
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    109618 33 -    189883 A-CT--AC--ACTGAT-GTAAAAAAAA-T---AAATGAGCTAT--------------
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 I 8
s Ailuropoda_melanoleuca.LNAT01000321.1                  10654349 37 +  23371972 C-CT--AT--ACTGCT-ATGA----AA-T---ACAGGAGCTAG--A-A-A-ATGCT-
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7091069 37 -  16596857 C-CT--AT--ACTGCT-GTGA----AA-C---ACAGGAGCTAG--A-A-A-ATGCT-
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   10023 38 -     22067 C-TT--AT--ACTGTT-GTGA----AA-T---ATATTAGACAG--A-A-A-ATGTTT
i Allactaga_bullata.AllBul_scaffold_70162               I 8 C 0
s Allenopithecus_nigroviridis.k141_3103707                  59951 38 +     61638 T-CT--GT--ACTATT-ATGA----AA-T---ATATGAGCTTG--A-A-A-ATGTCT
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        51759 38 +     53391 T-CT--GT--ACTATT-ATGC----AA-T---ATATGAGCTTG--A-A-A-ATGTCT
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         2484 38 +     72529 T-CT--GT--ACTATT-ATGC----AA-T---ATATGAGCTTG--A-A-A-ATGTCT
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          2059 38 +      3797 T-CT--GT--ACTATT-ATGC----AA-T---ATATGAGCTTG--A-A-A-ATGTCT
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             7248 38 -     18050 T-CT--GT--ACTATT-ATGA----AA-T---ACGTGAGCTGG--A-A-A-ATTTCT
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  8359 38 -     11521 T-CT--GT--ACTATT-ATGA----AA-T---ATGTGAGCTGG--A-A-A-ATTTCT
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              7925 38 -     21359 T-CT--GT--ACTATT-ATGA----AA-T---ACGTGAGCTGG--A-A-A-ATTTCT
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1856473                                6302 38 +      7227 T-CT--GT--ACTATT-ATGA----AA-T---ATGGGAGCTGG--A-A-A-ATTTCT
i Alouatta_juara.k141_1856473                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          7216 38 -     10438 T-CT--GT--ACTATT-ATGA----AA-T---ATGTGAGCTGG--A-A-A-ATTTCT
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            3872 38 +      7047 T-CT--GT--ACTATT-ATGA----AA-T---ATGTGAGCTGG--A-A-A-ATTTCT
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             7158 38 +     10410 T-CT--GT--ACTATT-ATGA----AA-T---ATGTGAGCTGG--A-A-A-ATTTCT
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                             961 38 -      4927 T-CT--GT--ACTATT-ATGA----AA-T---ATGTGAGCTGG--A-A-A-ATTTCT
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             3889 38 +      6429 T-CT--GT--ACTATT-ATGA----AA-T---ATGGGAGCTGG--A-A-A-ATTTCT
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3517779 38 +   4113121 T-CT--AT--ACTGTT-GTGA----AA-T---ATATGAGCTGG--A-A-A-ATGTTT
i Ammotragus_lervia.NIVO01013474.1                      I 17 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      387963 38 -    631301 C-CT--AC--ACTATT-GTAA----AA-T---ATATGAGCTGG--A-A-A-ATGCTT
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            28380 37 +     33004 T-CT--AT--ACTGTT-GTGA----AA-T---ATATGAGCTG---A-A-A-ATGTTT
i Antilocapra_americana.AntAmePen_scaffold_42841        I 18 C 0
s Aotus_azarae.k141_3170768                                 59607 38 +     78111 T-CT--GT--ACTATT-ATGA----AA-T---ATGTGAGCTGG--A-A-A-ATTTCT
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            2534 38 +     22701 T-CT--GT--ACTATT-ATGA----AA-T---ATGTGAGCTGG--A-A-A-ATTTCT
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5746492 38 +   9889416 t-cT--GT--ACTATT-ATGA----AA-T---ATGTGAGCTGG--A-A-A-ATTTCT
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             3077 38 -    104377 T-CT--GT--ACTATT-ATGA----AA-T---ATGTGAGCTGG--A-A-A-ATTTCT
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               3083 38 +     23246 T-CT--GT--ACTATT-ATGA----AA-T---ATGTGAGCTGG--A-A-A-ATTTCT
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     1107 29 +      5067 T-CT--GT--ACTGTT-GTGA----AT-T---ACATGAGCTAC--------------
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 I 8
s Arctocebus_calabarensis.k141_1161114                      15067 38 +     17483 T-CT--GT--GCCATT-GTGA----CA-T---ATATGAGCTGA--A-A-A-ATGCTT
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 6349 38 -     29036 T-CT--AC--ACTGTT-GTAA----AA-T---GTATGAGCTGC--A-T-A-ATGCTT
i Artibeus_jamaicensis.ArtJam_scaffold_41619            I 8 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9536349 38 +  39197703 T-CT--GC--ACTATT-ATGA----AA-T---ATGTGAGCTGG--A-A-A-TTTTCT
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             57633 38 +     85812 T-CT--GC--ACTATT-ATGA----AA-T---ATGTGAGCTGG--A-A-A-TTTTCT
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 8632 38 +     89302 T-CT--GC--ACTATT-ATGA----AA-T---ATGTGAGCTGG--A-A-A-TTTTCT
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             13142 38 -     58268 T-CT--GC--ACTATT-ATGA----AA-T---ATGTGAGCTGG--A-A-A-TTTTCT
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             61128 38 +    119057 T-CT--GC--ACTATT-ATGA----AA-T---ATGTGAGCTGG--A-A-A-TTTTCT
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               3079 38 -     25888 T-CT--GC--ACTATT-ATGA----AA-T---ATGTGAGCTGG--A-A-A-TTTTCT
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 3826 38 -     16375 T-CT--AT--ACTGTT-GTGG----AA-T---ATATGAGCTGG--A-A-A-ATGCTT
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                               146 38 +      2719 T-CT--AT--ACTGTT-GTGG----AA-T---ATATGAGCTGG--A-A-A-ATGCTT
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26377797 38 +  51448160 T-CT--AT--ACTATT-GTGA----AA-T---AAATGAGCTGG--A-A-A-ATGCTT
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        3028 38 -     13118 T-CT--AT--ACTATT-GTGA----AA-T---AAATGAGCTGG--A-G-A-ATGCTT
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   40875 38 -     72089 T-CT--AT--ACTGTT-GTGA----AA-T---ATATGAGCTGG--A-A-A-ATGTTT
i Beatragus_hunteri.BeaHun_scaffold_21644               I 17 C 0
s Bison_bison.KN264915.1                                  6556887 38 +   6870073 T-CT--AT--ACTGTT-GTGA----GA-T---ATATGAGGTGG--A-A-A-ATGTCT
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138137123 38 - 161108492 T-CT--AT--ACTGTT-GTGA----GA-T---ATATGAGGTGN--A-A-A-ATGTCT
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     569497 38 -    998990 T-CT--AT--ACTGTT-GTGA----GA-T---ACATGAGGTGG--A-A-A-ATGTCT
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136292856 38 - 158972876 T-CT--AT--ACTGTT-GTGA----GA-T---ATATGAGGTGG--A-A-A-ATGTCT
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1228612 38 -   1914593 T-CT--AT--ACTGTT-GTGA----AA-T---ATATGAGGTGG--A-A-A-ATGTCT
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               110968 38 -    171031 T-CT--GT--ACTATT-ATGA----AA-T---ATGTGAGCTGG--A-A-A-ATTTCT
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                  9994 38 +    125063 T-CT--GT--ACTATT-ATGA----AA-T---ATGTGAGCTGG--A-A-A-ATTTCT
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                12042 38 -    216513 T-CT--GT--ACTATT-ATGA----AA-T---ATGTGAGCTGG--A-A-A-ATTTCT
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        4582 38 -    134917 T-CT--GT--ACTATT-ATGA----AA-T---ATGTGAGCTGG--A-A-A-ATTTCT
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3217231 38 -   8989139 t-cT--AT--ACTATT-GTGA----AA-T---ATATGAGCTGG--A-A-A-ATGTTC
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           394935 38 -  15254737 t-cT--AT--ACTATT-GTGA----AA-T---ATATGAGCTGG--A-A-A-ATGTTC
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2970669 38 +   6889770 t-cT--AT--ACTATT-GTGA----AA-T---ATATGAGCTGG--A-A-A-ATGTTC
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11515728 37 +  39901454 A-TT--AT--AGTGTT-GTGA----AA-T---GTAGGAGCTAG--A-A-A-ATGCT-
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   10746 37 +     87036 A-TT--AT--AGTGTT-GTGA----AA-T---GTAGGAGCTAG--A-A-A-ATGCT-
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11262389 37 -  35597290 A-TT--AT--AGTGTT-GTGA----AA-T---GTAGGAGCTAG--A-A-A-ATGCT-
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11084918 37 +  39895921 A-TT--AT--AGTGTT-GTGA----AA-T---GTAGGAGCTAG--A-A-A-ATGCT-
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16451942 37 -  44759192 A-TT--AT--AGTGTT-GTGA----AA-T---GTAGGAGCTAG--A-A-A-ATGCT-
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21322884 38 + 157394656 T-CT--AT--ACTGTT-GTGA----AA-T---ATATGAGCTGG--A-A-A-ATGTTT
i Capra_aegagrus.CM003214.1                             I 25 C 0
s Capra_hircus.CM004562.1                               135704111 38 - 157403528 T-CT--AT--ACTGTT-GTGA----AA-T---ATATGAGCTGG--A-A-A-ATGTTT
i Capra_hircus.CM004562.1                               I 25 C 0
s Capromys_pilorides.CapPil_scaffold_647363                  1614 37 +      1887 T-CT--GT--ACTACT-GTGT----GA-C---C-ATTGTCTGG--A-A-A-ATGCTT
i Capromys_pilorides.CapPil_scaffold_647363             C 0 I 24
s Carlito_syrichta.NW_007248099.1                          306219 38 +    345090 T-CT--GT--ACTGTT-GTGA----AA-T---ATATGACTGGG--A-A-A-ATGCTT
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               57147 38 +     67245 C-CT--AC--ACTGTT-GTAA----AA-T---ATATGAGCTGC--A-A-A-ATGCTT
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   27635 38 +     33760 G-CT--GT--TCTCTT-GTGA----AA-T---ATGTGAGCTGG--A-A-A-ATGTTT
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   156442 38 -    276539 T-CT--AT--ACTACT-GTGA----AA-T---ATATGAGCTGG--A-A-A-ATATTT
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18887820 38 -  29618158 T-CT--GT--ACTATT-ATGA----AC-T---ATGTGAGCTGG--A-A-A-ATTTAT
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 5364 38 -     26817 T-CT--GT--ACTATT-ATGA----AC-T---ATGTGAGCTGG--A-A-A-ATTTAT
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                 9607 38 +     25043 T-CT--GT--ACTATT-ATGA----AC-T---ATGTGAGCTGG--A-A-A-ATTTTT
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         5256 38 +     21754 T-CT--GT--ACTGTT-GTGA----AA-T---ATATGACTGGG--A-A-A-ATGCTT
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4360938 38 +   7569818 c-CT--AC--ACTGTT-GTGA----AA-T---ATATGAGCTAG--A-A-A-ATGCTT
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623          693 38 -      9338 C-CT--AC--ACTGTT-GTGA----AA-T---ATATGAGCTAG--A-A-A-ATGCTT
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6551743 38 +   6739814 t-cT--GT--ACTATT-ATGA----AA-T---ATATGAGCTTG--A-A-A-ATGTCT
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      53220 38 -     54931 T-CT--GT--ACTATT-ATGA----AA-T---ATATGAGCTTG--A-A-A-ATGTCT
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         18204 38 -     19697 T-CT--GT--ACTATT-ATGA----AA-T---ATATGAGCTTG--A-A-A-ATGTCT
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         55735 38 -    107033 T-CT--GT--ACTATT-ATGA----AA-T---ATATGAGCTTG--A-A-A-ATGTCT
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        2180 38 -      3853 T-CT--GT--ACTATT-ATGA----AA-T---ATATGAGCTTG--A-T-A-ATGTCT
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          26113 38 +     30494 T-CT--GT--ACTATT-ATGA----AA-T---ATATGAGCTTG--A-A-A-ATGTCT
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           2137 38 -      4022 T-CT--GT--ACTATT-ATGA----AA-T---ATATGAGCTTG--A-A-A-ATGTCT
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          2030 38 -      3505 T-CT--GT--ACTATT-ATGA----AA-T---ATATGAGCTTG--A-A-A-ATGTCT
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           20820 38 +     35983 T-CT--AT--ACTATT-ATGA----AA-T---ATATGAGCTTG--A-A-A-ATGTCT
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11987356 38 +  12117833 T-CT--GT--ACTATT-ATGA----AA-T---ATATGAGCTTG--A-A-A-ATGTCT
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46474109 38 +  46592721 T-CT--AT--ACTATT-ATGA----AA-T---ATATGAGCTTG--A-A-A-ATGTCT
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      31936 38 +     33420 T-CT--AC--ACTATT-ATGA----AA-T---ATATGAGCTTG--A-A-A-ATGTCT
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        1972 38 -      3443 T-CT--GT--ACTATT-ATGA----AA-T---ATATGAGCTTG--A-A-A-ATGTCT
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      2963 38 -      4669 T-CT--GT--ACTATT-ATGA----AA-T---ATATGAGCTTG--A-A-A-ATGTCT
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        2763 38 -      4411 T-CT--AT--ACTATT-ATGA----AA-T---ATATGAGCTTG--A-A-A-ATGTCT
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         2288 38 -      4205 T-CT--GT--ACTATT-ATGA----AA-T---ATATGAGCTTG--A-A-A-ATGTCT
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_1070855           496 40 -      1715 C-CTTTGT--ACCATT-GTGA----AG-T---ATATAAGCTGA--A-A-A-ATGGTT
i Chaetophractus_vellerosus.ChaVel_scaffold_1070855     I 8 I 14
s Cheirogaleus_major.k141_1157592                           56132 38 -     68416 T-CT--GT--ACTGTT-GTGA----AA-T---ATATGAGCTGG--A-A-A-ATGGTT
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            5178 38 +     13308 T-CT--GT--ACTGTT-GTGA----AA-T---ATATGAGCTGG--A-A-A-ATGGTT
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             2642 38 -     18223 T-CT--GT--AGTATA-ATGA----AA-T---ATGTAAGCTGG--A-A-A-ATTTCT
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             19665 38 +     25473 T-CT--GT--AGTATA-ATGA----AA-T---ATGTAAGCTGG--A-A-A-ATTTCT
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           38704 38 +     57117 T-CT--GT--AGTATA-ATGA----AA-T---ATGTAAGCTGG--A-A-A-ATTTCT
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          43379 38 +     54541 T-CT--GT--AGTATA-ATGA----AA-T---ATGTAAGCTGG--A-A-A-ATTTCT
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15958976 37 +  43084221 G-CT--GA--ACTATT-ATGT----GA-C---A-ATAGCCTGG--A-A-A-GTTCTT
i Chinchilla_lanigera.JH721867.1                        I 24 C 0
s Chiropotes_israelita.k141_1189915                         68189 38 +    196370 T-CT--GT--ACTGTT-ATGA----AA-T---ATATGAGCTGG--A-A-A-ATTTCT
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          12370 38 +     40510 T-CT--GT--ACTGTT-ATGA----AA-T---ATATGAGCTGG--A-A-A-ATTTCT
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15135570 38 -  15256731 T-CT--GT--ACTATT-ATGC----AA-T---ATATGAGCTTG--A-A-A-ATATCT
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      30616 38 -     53260 T-CT--GT--ACTATT-ATGC----AA-T---ATATGAGCTTG--A-A-A-ATGTCT
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101141065 38 + 101219884 t-cT--GT--ACTATT-ATGC----AA-T---ATATGAGCTTG--A-A-A-ATGTCT
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                14109 32 -     21363 C-CT--GT--ACTGTT-GTCA----AG-T---TTATGAGCTGA--A-A-A-------
i Choloepus_didactylus.ChoDid_scaffold_36182            I 27 I 12
s Choloepus_hoffmanni.KN194586.1                           759419 32 +    964067 C-CT--GT--ACTGTT-GTCA----AG-T---TTATGAGCTGA--A-A-A-------
i Choloepus_hoffmanni.KN194586.1                        C 0 I 12
s Chrysochloris_asiatica.ChrAsi_scaffold_141308              6215 38 -     12508 C-AT--AT--ATTGCT-GTGA----GA-T---ATCTGAGCTAA--A-A-A-ATTCTT
i Chrysochloris_asiatica.ChrAsi_scaffold_141308         C 0 I 13
s Colobus_angolensis.KN985967.1                          10879644 38 +  10971483 t-cT--GT--ACTATT-ATGA----AA-T---ATATGAGCTTG--A-A-A-ATTTCT
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147660802 38 + 156195979 T-CT--GT--ACTATT-ATGA----AA-T---ATATGAGCTTG--A-A-A-ATTTCT
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            12789 38 +     23629 T-CT--GT--ACTATC-ATGA----AA-T---ATATGAGCTTG--A-A-A-ATTTCT
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60610406 38 +  78930452 c-CT--GT--TCTATT-GTGA----TA-T---AGACGAGCTGG--A-A-A-ATGCAT
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         36855 38 -     40477 C-CC--AT--ACTGTT-GTGA----AA-T---GTGTGAGCTGG--A-G-A-ATGCTT
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 274715 38 -    399297 C-CT--GC--ACTGCT-CTAA----AA-T---AAATGAGTTCC--A-A-A-ATGCCT
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53026248 38 +  72327488 c-ct--gC--ATTGCT-GTAA----AA-T---AAATGAGCTGG--G-A-T-CTGCTT
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             17149 38 -     19186 A-CT--GT--TATGAT-GTGA----AA-T---ATCTAAACTGA--A-A-A-GTGCTT
i Crocidura_indochinensis.CroInd_scaffold_38409         I 8 I 14
s Cryptoprocta_ferox.CryFer_flattened_line_19014            49039 39 -     70449 T-CT--AT--GCTCTT-GTGG----AA-T---ATAGGAACAAAAAA-A-A-ACATT-
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  205418 38 -    956709 T-CT--GT--ACCACT-GTGT----GA-T---ATATGACCTAG--A-A-A-ATTCTT
i Ctenodactylus_gundi.CteGun_scaffold_447               I 16 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 27747 38 -     67205 T-CT--GT--ACTACT-GTGT----GAAC---A-ATAGTTTAA--A-A-A-ATTCTT
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 I 24
s Dasypus_novemcinctus.JH568778.1                          179306 38 -   6883506 c-ct--aT--ACCATT-GAGA----AG-C---ATATAAGCTGA--A-A-A-ATGGTT
i Dasypus_novemcinctus.JH568778.1                       I 8 I 15
s Daubentonia_madagascariensis.ctg11                     16841999 38 +  31942871 T-CT--GT--ACTGTT-GTGA----AA-T---ATATGAGCTGG--A-A-A-ATGCTT
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80034481 38 -  96802777 T-CT--AT--ACGATT-GTga----aa-t---aaatgagctgg--a-a-g-atgCTT
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18696459 38 -  18957592 c-cT--AC--ACTGTT-GTAA----AA-T---ATATGAGCTGG--A-A-A-ATGCTT
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 319599 38 +    993696 c-CT--AC--ACTGTT-GTGA----AA-T---ATATGAGCTAG--A-A-A-ATGCTT
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                    239 38 +    151128 C-CT--AC--ACTGTT-GTGA----AA-T---ATATGAGCTAG--A-A-A-ATGCTT
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   154867 37 +    228994 T-CT--GA--ACTATT-GTGT----GA-C---A-ATAATCTGA--A-A-A-ATTCTT
i Dinomys_branickii.DinBra_scaffold_1996                I 24 C 0
s Dipodomys_ordii.KN672545.1                              3652615 38 +   4240102 c-ct--GT--ACTGTT-GTAA----AA-T---ATGTGAGCAAG--T-A-G-ATGCTT
i Dipodomys_ordii.KN672545.1                            I 13 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 24170 38 +     28912 C-CT--GT--ACTGTT-GTAA----AA-T---ATGTGAGCAAG--T-A-G-ATGCTT
i Dipodomys_stephensi.DipSte_scaffold_44365             I 13 C 0
s Echinops_telfairi.AAIY02274224.1                              2 38 +      1655 T-AT--ATTTACTATT-GTgc----aa-t---atatta---at--a-aaa-atgttt
i Echinops_telfairi.AAIY02274224.1                      n 1367 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1489143 38 +   1727528 T-CT--AT--ACTGTT-GTGA----AA-T---ATATGAGCTGG--A-A-A-ATGTTT
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7803899 38 +  15467074 t-tt--at--attgtt-gtga----aA-T---ACATTGAGCTG--G-A-A-ATGTTC
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        236905 29 -    369425 C-CA--AC--ACTGCa-gtaa----aa-t---aaatgagttaa--------------
i Ellobius_lutescens.LOEQ01003611.1                     C 0 I 8
s Ellobius_talpinus.LOJH01090055.1                           3921 29 -      7838 c-cA--AC--ACTGCa-gtaa----aa-t---aaatgagttaa--------------
i Ellobius_talpinus.LOJH01090055.1                      C 0 I 8
s Enhydra_lutris.KZ291749.1                              85868799 37 +  99434291 c-cT--AT--ACTGCT-GTGA----AA-T---ACAGGAGCTAG--A-A-A-ATGCT-
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Equus_asinus.JREZ01000062.1                             5850319 38 -   7175178 c-cC--AT--ACTGTT-GTGA----AA-T---ATGTGAGCTGG--T-A-A-ACGCTT
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13348821 38 +  41866177 c-cC--AT--ACTGTT-GTGA----AA-T---ATGTGAGCTGG--T-A-A-ACGCTT
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          10311 38 +     92910 c-cC--AT--ACTGTT-GTGA----AA-T---ATGTGAGCTGG--T-A-A-ACGCTT
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11529906 38 +  16010500 C-TT--AC--TTCGTT-GTGA----AG-T---ATATGGGCTGT--A-A-A-ACTCGT
i Erinaceus_europaeus.JH835290.1                        C 0 I 211
s Erythrocebus_patas.Contig8                             48767748 38 -  48907691 T-CT--GT--ACTATT-ATGA----AA-T---ATATGAGCTTG--A-A-A-ATGTCT
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          312683 38 +    330699 T-CT--AT--ACTATT-GTGA----AA-T---AAATGAGCTGG--A-A-A-ATGCTT
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             59113 38 +     89355 T-CT--AT--ACTATT-GTGA----AA-T---AAATGAGCTGG--A-A-A-ATGCTT
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              2179 38 +     13586 T-CT--GT--ACTGTT-GTGA----AA-C---ATATGAGCTGG--A-A-A-ATGGTT
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               2114 38 -      6809 T-CT--GT--ACTGTT-GTGA----AA-C---ATATGAGCTGG--A-A-A-ATGGTT
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             8587 38 +     36558 T-CT--GT--ACTGTT-GTGA----AA-C---ATATGAGCTGG--A-A-A-ATGGTT
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             4903 38 +     60246 T-CT--GT--ACTGTT-GTGA----AA-C---ATATGAGCTGG--A-A-A-ATGGTT
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 8391 38 +    109717 T-CT--GT--ACTGTT-GTGA----AA-C---ATATGAGCTGG--A-A-A-ATGGTT
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               12765 38 +     16540 T-CT--GT--ACTGTT-GTGA----AA-C---ATATGAGCTGG--A-A-A-ATGGTT
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                13041 38 +     27497 T-CT--GT--ACTGTT-GTGA----AA-C---ATATGAGCTGG--A-A-A-ATGGTT
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           15503 38 +     26808 T-CT--GT--ACTGTT-GTGA----AA-C---ATATGAGCTGG--A-A-A-ATAGTT
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                30231 38 +     46535 T-CT--GT--ACTGTT-GTGA----AA-C---ATATGAGCTGG--A-A-A-ATGGTT
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              12954 38 -     29447 T-CT--GT--ACTGTT-GTGA----AA-C---ATATGAGCTGG--A-A-A-ATGGTT
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129890002 37 - 159252932 C-CT--AT--ACTCTT-GTGG----AA-T---ATAGgaacaag--a-a-a-acatt-
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129277077 37 - 158578461 C-CT--AT--ACTCTT-GTGG----AA-T---ATAGgaacaag--a-a-a-acatt-
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 18211 37 +     52776 C-CT--AT--ACTCTT-GTGG----AA-T---ATAGGAACAAG--A-A-A-ACATT-
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13889940 37 -  19261668 T-CT--GT--ACTATT-GTGT----GA-T---A-ATGGGCTGG--A-A-A-ATTCTT
i Fukomys_damarensis.KN123630.1                         I 25 I 26
s Galago_moholi.ctg555                                     208126 38 -    847004 T-CT--GT--TCCATT-GTGA----AA-T---ACATGACCTGG--A-A-A-ATGCTT
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           10507 38 -     43889 T-CT--GT--TCCATT-GTGA----AA-T---ACATGACCTGG--A-A-A-ATGCTT
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           7575 38 +     27357 T-CT--GT--ACCATT-GTGA----AA-T---ATATAAGCTGG--A-A-A-ATGCTT
i Galagoides_demidoff.k141_1769638                      I 7 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               153457 37 +    324696 C-CT--GT--G-TGTT-GTGA----AA-T---ATATAAGCTAG--A-A-A-ATGCTT
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    178657 38 -    189561 T-CT--AT--ACTGTT-GTGA----AA-T---ATGTGAGCTGG--A-A-A-ATGTTT
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 17 C 0
s Glis_glis.GliGli_scaffold_79770                            9860 38 -     18683 C-CT--GC--ACTGTT-GTGA----AA-T---ATATGAGCTGG--A-A-A-ATGTTT
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               2337 38 -     14630 T-CT--GT--ACTATT-ATGA----AA-T---ATATGAGCTTG--A-A-A-ATTTTT
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119649436 38 - 195582420 t-ct--GT--ACTATT-ATGA----AA-T---ATATGAGCTTG--A-A-A-ATTTTT
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   74403 38 +    118900 C-CT--AC--ACTTTT-ATGA----AA-T---ATATGAGCTGG--A-A-A-ATGTTT
i Graphiurus_murinus.GraMur_scaffold_4493               I 8 C 0
s Hapalemur_alaotrensis.k141_1198205                         2749 38 +      3980 T-CT--GT--ACTGTT-GTGA----AA-T---ATGTGAGCTGG--A-A-A-ATGGTT
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             25224 38 +     26611 T-CT--GT--ACTGTT-GTGA----AA-T---ATGTGAGCTGG--A-A-A-ATGGTT
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             2685 38 +     56096 T-CT--GT--ACTGTT-GTGA----AA-T---ATGTGAGCTGG--A-A-A-ATGGTT
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        25960 38 -     42470 T-CT--GT--ACTGTT-GTGA----AA-T---ATGTGAGCTGG--A-A-A-ATGGTT
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        42555 38 -     54384 T-CT--GT--ACTGTT-GTGA----AA-T---ATGTGAGCTGG--A-A-A-ATGGTT
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              14247 37 +     53719 C-CT--AT--ACTCTT-GTGG----AA-T---ATAGGAACAAG--A-A-A-ACATT-
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                25157 38 -     91191 T-CT--AT--ACTGTT-GTGA----AA-T---ATATGATCTGG--A-A-A-ATGTTT
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2548320 37 +  31725842 T-CT--AT--ACTGTT-GTGT----GA-T---A-ATGGCCTGG--A-A-A-ATTCTT
i Heterocephalus_glaber.JH602058.1                      I 24 I 23
s Heterohyrax_brucei.HetBruBak_scaffold_25354               53707 39 +     73687 C-CA--AT--ATTGCT-GTGA----AA-T---ACATGAGCTAC--A-AAA-ATGCTT
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              144718 36 +    277961 T-CT--AT--ACTATT-GTGA----AA-T---A--TGAGCTAG--A-A-A-ATGCTT
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hoolock_leuconedys.ctg79                                       227 38 -   7690867 T-TT--GT--ACTATT-ATGA----AA-T---AGATGAGCTTG--A-A-A-ATTTTT
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 13314 37 -     67322 C-CT--AT--ACTCCT-GTGG----AA-T---ATAGGAACAAG--A-A-A-ACGTT-
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hylobates_abbotti.k141_493872                              2154 38 +      5897 T-TT--GT--ACTGTT-ATGA----AA-T---AGATGAGCTTG--A-A-A-ATTTTT
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_1485652                               580 38 -      1697 T-TT--GT--ACTGTT-ATGA----AA-T---AGATGAGCTTG--A-A-A-ATTTTT
i Hylobates_agilis.k141_1485652                         C 0 I 183
s Hylobates_klossii.k141_466549                              8606 38 +     11537 T-TT--GT--ACTATT-ATGA----AA-T---AGATGAGCTTG--A-A-A-ATTTTT
i Hylobates_klossii.k141_466549                         I 114 I 276
s Hylobates_pileatus_b.ContigUN                                 14621699 38 -  25970782 T-TT--GT--ACTATT-ATGA----AA-T---AGATGAGCTTG--A-A-A-ATTTTT
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1133650                            1588 38 -      2775 T-TT--GT--ACTGTT-ATGA----AA-T---AGATGAGCTTG--A-A-A-ATTTTT
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             30191 38 -     60944 T-TT--GT--ACTATT-ATGA----AA-T---AGATGAGCTTG--A-A-A-ATTTTT
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     3350 37 +     22540 C-CT--GT--ACTATT-GTGT----GA-T---G-ATGTTCTGG--A-A-A-ATTCTT
i Hystrix_cristata.HysCri_scaffold_50788                I 24 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7123237 38 +  13083262 c-CT--AT--ACTGTT-GTGA----AA-T---AAGTGAGCCAG--A-A-A-ATGTTT
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_1884019                                    420 38 -      2196 T-CT--AT--ACTGTT-GTGG----AA-T---ATATGAACTGG--A-A-A-ATGCTT
i Indri_indri.k141_1884019                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               6468 38 +     17520 T-CT--AT--ATGATT-GTGA----GA-T---AAATGAGCTGG--A-A-A-ATGCTT
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8562748 38 +  11848649 C-TT--AT--ACTGTT-GTGA----AA-T---ATATGAGAAAG--G-A-A-Atgttt
i Jaculus_jaculus.JH725517.1                            C 0 I 24
s Kogia_breviceps.KogBre_flattened_line_35920               21301 38 +     37189 T-CT--AT--ACAATT-GTGA----AA-T---AAATGAGCTGG--A-A-A-ATGCTT
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          47203 38 -    147782 T-CT--GT--ACTATT-ATGA----AA-T---ATGTGAGCTGG--A-A-A-ATTTCT
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   111222 37 -    115756 C-TC--AT--GTTGTT-T-TT----AA-T---ATATGAGCTGG--A-A-A-ATGCTT
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258404233 38 - 285822530 T-CT--GT--ACTGTT-GTGA----AA-T---ATATGAGCTGG--A-A-A-ATGGTT
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        21126 38 +     39228 T-CT--GT--ACTGTT-GTGA----AA-T---ATATGAGCTGG--A-A-A-ATGCTT
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            50499 38 +     63517 T-CT--GT--ACTGTT-GTGA----AA-T---ATATGAGCTGG--A-A-A-ATGCTT
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        75720 38 +    116806 T-CT--GT--ACTGTT-GTGA----AA-T---ATATGAGCTGG--A-A-A-ATGCTT
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     28764 38 -     33031 T-CT--GT--ACTGTT-GTGA----AA-T---ATATGAGCTGG--A-A-A-ATGCTT
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3083017 37 -   3498232 C-CT--AT--ACTGCT-GTGA----AA-T---ATAGGAGCTAG--A-A-A-ATGCC-
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    10212 38 +     22452 C-CT--AT--ATTGTT-GAGA----AA-T---ATATGAGCTAG--A-A-A-ATGCTT
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            133638 38 +   3060487 T-CT--AT--ACGATT-GTGA----AA-T---AAATGAGCTGG--A-A-A-ATGCTT
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19244831 38 +  19376315 T-CT--GT--ACTATT-ATGA----AA-T---ATATGAGCTAG--A-A-A-ATGTCT
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            7867 38 +     84689 T-CT--GT--ACCACT-GTGA----AA-T---ATATGAGCTGG--A-A-A-ATACTT
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3775618 38 +   6799190 T-CT--GT--ACCACT-GTGA----AA-T---ATATGAGCTGG--A-A-A-ATACTT
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20588488 38 -  62548349 c-ct--AT--GCTGTT-GTGA----AA-T---ATATGAGCTAG--A-A-A-ATGCTT
i Loxodonta_africana.GL010040.1                         C 0 I 13
s Lycaon_pictus.CM007556.1                               11084374 37 +  39895028 A-TT--AT--AGTGTT-GTGA----AA-T---GTAGGAGCTAG--A-A-A-ATGCT-
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             16518 38 +     74745 T-CT--GT--ACTATT-ATTA----AA-T---ATATGAACTTG--A-A-A-ATGTCT
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12703024 38 +  12821369 T-CT--GT--ACTATT-ATTA----AA-T---ATATGAACTTG--A-A-A-ATGTCT
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               5120 38 +      6569 T-CT--GT--ACTATT-ATTA----AA-T---ATATGAACTTG--A-A-A-ATGTCT
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           43422 38 +     63263 T-CT--GT--ACTATT-ATTA----AA-T---ATATGAACTTG--A-A-A-ATGTCT
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_1068107                               11998 38 +     12679 T-CT--GT--ACTATT-ATTA----AA-T---ATATGAACTTG--A-A-A-ATGTCT
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                1571 38 +      3017 T-CT--GT--ACTATT-ATTA----AA-T---ATATGAACTTG--A-A-A-ATGTCT
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  43183 38 -     79256 T-CT--GT--ACTATT-ATTA----AA-T---ATATGAACTTG--A-A-A-ATGTCT
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196032101 38 + 196197964 t-ct--gt--actatt-atta----aa-t---atatgaacTTG--A-A-A-ATGTCT
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11442207 38 +  11645122 t-ct--gt--actatt-atta----aa-t---atatgaacTTG--A-A-A-ATGTCT
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   2130 38 -     46448 T-CT--GT--ACTATT-ATTA----AA-T---ATATGAACTTG--A-A-A-ATGTCT
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                1961 38 -      3617 T-CT--GT--ACTATT-ATTA----AA-T---ATATGAACTTG--A-A-A-ATGTCT
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 12293 38 -     55006 T-CT--GT--ACTATT-ATTA----AA-T---ATATGAACTTG--A-A-A-ATGTCT
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43837330 38 +  43892939 T-CT--GT--ACTATT-ATTA----AA-T---ATATGAACTTG--A-A-A-ATGTCT
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                4552 38 -      5978 T-CT--GT--ACTATT-ATTA----AA-T---ATATGAACTTG--A-A-A-ATGTCT
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               2135 38 -     27140 T-CT--GT--ACTATT-ATTA----AA-T---ATATGAACTTG--A-A-A-ATGTCT
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43433991 38 -  43563597 T-CT--GT--ACTATT-ATGA----AA-T---ATATGAGCTTG--A-A-A-ATGTCT
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4446817 38 -   4543643 T-CT--GT--ACTATT-ATGA----AA-T---ATATGAGCTTG--A-A-A-ATGTCT
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            143749 38 +    252755 C-CT--AC--ACTACT-GTGA----AA-T---ATATGAGCTAG--A-A-A-ATGCTT
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             33823 38 +     58827 C-CT--AC--ACTATT-GTGA----AA-A---ATATGAGCTGG--A-A-A-ATGCTT
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36871077 38 +  64221397 c-CT--AT--ACTGTT-GTGA----AA-T---AAATGAGCCAG--A-A-A-ATGTTT
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       61908 38 -    234502 C-CC--AG--ACCGTC-GTGA----AA-T---ACGTGAGCTGG--A-A-A-ATGCTT
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_1828            226290 37 -    226874 C-CT--AT--ACTGCT-GTGA----AA-T---ACAGGAGCTAG--A-A-A-ATGCT-
i Mellivora_capensis.MelCap_flattened_line_1828         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233                9209 38 +     15977 C-CT--AC--ACTGCT-CTAA----AA-T---AAATGAGCCAG--G-A-A-TGGCTT
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1043989 38 -  26018355 c-ct--GC--AGTGCT-GTAA----AA-T---AAATGAGCTAG--G-A-A-CTGCTT
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_183284                   1338 38 +      2166 T-CT--TT--ATGATT-GTGA----AA-T---AAATGAGCTGG--A-A-A-ATGCTT
i Mesoplodon_bidens.MesBid_scaffold_183284              C 0 C 0
s Microcebus_murinus.CM007691.1                          16507352 38 +  47401472 T-CT--GT--ACTGTT-GTGA----AA-T---ATATGAGCTGG--A-A-A-ATGCTT
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  28657 36 -     48017 C-AT--ATTTACTC-T-GTGC----AA-T---ATATTA---AT--A-A-A-ATATTT
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               20307 38 -     32043 C-CT--AC--ACTGTG-ATAA----AG-T---GCATAAACTGG--A-A-T-ATGCTT
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22817106 29 -  98408828 C-CA--AC--ATTAca-gtaa----aa-t---aaatgagttaa--------------
i Microtus_ochrogaster.CM001673.1                       C 0 I 8
s Miniopterus_natalensis.LDJU01000022.1                   8207080 38 +  10048721 c-CT--AT--ACTGTT-GTAA----AA-T---ATGTGAgctgg--a-a-a-atgttt
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            31751 38 +     45743 C-CT--AT--ACTGTT-GTAA----AA-T---ATGTGAGCTGG--A-A-A-ATGTTT
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        32650 38 +     34273 T-CT--GT--ACTGTT-ATGA----AA-T---ATATGAGCTTG--A-A-A-ATGTCT
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         8320 37 -    104932 C-CT--AT--ACTGCT-GTGA----AA-T---ATAGGAGCTAG--A-A-A-ATGCC-
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     2757 38 +      8497 T-CT--GT--ACTGTT-GTGA----AA-T---ATATGAGCTGT--A-A-A-ATGCTT
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 144065 38 +    154973 T-CT--AT--ACGATT-GTGA----AA-T---AAATGAGCTGG--A-A-A-ATGCTT
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                158845 38 +    265003 C-CT--AT--ACTGTT-GTGA----AA-T---ACGTGAGCTGG--A-A-A-ATGCTT
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 2243 38 -      4346 T-CT--GT--ACTGTT-GCAA----AA-T---ATATGAGATGG--A-A-A-ATGTTT
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  141942 37 -    168139 C-CT--AT--ACTCTT-GTGG----AA-T---ATAAGATCAAG--A-A-A-ACATT-
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          16730 38 -    100666 C-TT--AT--GCTGTT-TTTT----AC-T---ATAAGAGCTTT--A-A-A-ATGCTT
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70763594 38 +  92629107 c-ct--aC--ACTGCA-GTGA----AA-T---AAATGAGCTAG--G-A-A-CGGCTT
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75486656 38 +  98207768 C-CT--AC--ACTGCA-GTGA----AA-T---AAATGAGCTAG--G-A-A-CGgctt
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67552818 38 +  89017189 c-ct--AC--ACTGCG-GTAA----AA-T---AAATGAGCTAG--G-A-A-CTGCGT
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74327831 38 +  97876770 C-CT--AC--CCTGCA-GTGA----AA-T---AAATGAGCTAG--G-A-A-CGGCTT
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              8363 38 +     98495 C-CT--GC--ACTGTT-GTAA----AA-T---ATATGAGCTGG--A-A-A-AGTTTT
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4421182 37 -  28371801 c-cT--AT--ACTGCT-GTGA----AA-C---ACAGGAGCTAG--A-A-A-ATGCT-
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     87303 37 -    117718 T-CT--GT--ACTGTC-GTGT----GA-C---G-ATAGTCTGG--A-A-A-ATGTTT
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 I 24
s Myotis_brandtii.KE161952.1                               965057 38 +   8389877 cTT---AT--GCTGTT-GTTT----AA-T---ATATGAGGTGA--A-A-A-GTGCTT
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5016739 37 +   6462685 g-T---AT--CCTGTT-GTTT----AA-T---ATACGAGCTGG--A-A-A-GTGCTT
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3462643 38 -   3747815 cTT---AT--GCTGTT-GTTT----AA-T---ATATGAGCTGG--A-A-A-GTGCTT
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         7832 37 +     66751 C-T---AT--CCTGTT-GTTT----AA-T---ATATGAGCTGG--A-A-A-GTGCTT
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             2708 34 -      8794 ----------ATTGTT-GTGA----AG-T---ATATGAGCTGA--A-A-AGATGCTT
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        I 3 I 15
s Nannospalax_galili.KL204535.1                           2057078 38 +   2354432 a-ct--cT--ATTGCT-CCAA----AA-T---AAATCAGCTGG--A-A-A-ATACTT
i Nannospalax_galili.KL204535.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               5029 38 +     48152 T-CT--GT--ACTATT-ATGA----AA-T---ATATGAGCTTG--A-A-A-ATTTCT
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4481920 37 -  14209539 C-CT--AT--ACTGCT-GTGA----AA-T---ATAGGACCTAG--A-A-A-ATGCC-
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3948676 38 -   4490290 T-CT--AT--ACGATT-GTGA----AA-T---AAATGAGCTGG--A-A-A-ATGCTT
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  46958 38 +     94413 C-CT--AC--AATGTT-GCAA----AA-T---ATATGAGTTGG--A-A-A-ATGCTT
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1223136                          10822 38 -     11253 T-TT--GT--ACTATT-ATGA----AA-T---AGATGAGCTTG--A-A-A-ATTTTT
i Nomascus_annamensis.k141_1223136                      C 0 C 0
s Nomascus_concolor.k141_49591                                124 38 +      2014 T-TT--GT--ACTATT-ATGA----AA-T---AGATGAGCTTG--A-A-A-ATTTTT
i Nomascus_concolor.k141_49591                          N 0 C 0
s Nomascus_gabriellae.k141_906566                            1454 38 -      2544 T-TT--GT--ACTATT-ATGA----AA-T---AGATGAGCTTG--A-A-A-ATTTTT
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             21928 38 -  18771707 T-TT--GT--ACTATT-ATGA----AA-T---AGATGAGCTTG--A-A-A-ATTTTT
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_844529                                  1203 38 +      2124 T-TT--GT--ACTATT-ATGA----AA-T---AGATGAGCTTG--A-A-A-ATTTTT
i Nomascus_siki_a.k141_844529                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                27367 37 +   3668941 A-TT--AT--AGTGTT-GTGA----AA-T---ATAGGAGCTAG--A-A-A-ATGCT-
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65564205 38 -  95554990 T-CT--GT--ACCATT-GTGA----AA-T---ATATGAGCTGG--A-A-A-ATGTTT
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            1050 38 +      6470 T-CT--GT--ACCATT-GTGA----AA-T---ATATGAGCTGG--A-A-A-ATGTTT
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65666574 38 +  89412551 T-CT--GT--ACCATT-GTGA----AA-T---ATATGAGCTGG--A-A-A-ATGCTT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4993195 38 -  23139505 C-TT--AT--ACTGTT-GAGA----AA-C---ACATGAGCTGC--A-G-A-ACACAT
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3680579 34 +  10294119 ---t--gg--actagt-atgt----ggtctat------tttag--a-a-a-gtgact
i Octodon_degus.JH651621.1                              I 1836 C 0
s Odobenus_rosmarus.KB229369.1                             676573 37 -   3126709 C-CT--AT--ACTGCT-GTGA----AA-T---ATAGGAGCTAG--A-A-A-ATGCC-
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1077368 38 +   1425656 T-CT--AT--ACTGTT-GTGA----AA-T---ATATGAGCTGG--A-A-A-ATGTTT
i Odocoileus_virginianus.KZ101650.1                     I 16 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         34528 38 +     78940 T-CT--AT--ACTGTT-GTGA----AA-T---ATGTGAGctgg--a-a-a-atgttt
i Okapia_johnstoni.LVCL01S0017931.1                     I 15 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  122385 29 +    145789 C-CT--AT--GCTGCA-GTAA----AA-T---AAATGAGTTAA--------------
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 I 8
s Onychomys_torridus.OnyTor_scaffold_12578                  34148 26 +     62360 ------------------TAA----AA-T---AAACGAGTCAG--G-A-A-CTGCCT
i Onychomys_torridus.OnyTor_scaffold_12578              I 4 C 0
s Orcinus_orca.KB316965.1                                 7222363 38 -   7562323 T-CT--AT--ACGATT-GTGA----AA-T---AAATGAGCTGG--A-A-A-ATGCTT
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              40738 38 -     66828 C-CT--AT--ACTCTT-GTGA----AA-T---CTATGAGGTAG--A-A-A-AGGCTT
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141872870 38 + 163896628 c-cT--AT--ATTGTT-GAGA----AA-T---ATATGAGCTGG--A-A-A-ATGCTT
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      304706 37 -    505867 A-TT--AT--AGTGTT-GTGA----AA-T---ATAGGAGCTAG--A-A-A-ATGCT-
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       36217 38 +     38679 T-CT--GT--ACCATT-GTGA----AC-T---ATATGACCTGG--A-A-A-ATGCTT
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18005658 38 -  38779656 t-ct--gt--aCCATT-GTGA----AC-T---ATATGACCTGG--A-A-A-ATGCTT
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134074950 38 - 275406953 T-CT--AT--ACTGTT-GTGA----AA-T---ATATGATCTGG--A-A-A-ATGTTT
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      76164 38 +    140051 T-CT--AT--ACTGTT-GTGA----AA-T---ATATGATCTGG--A-A-A-ATGTTT
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127571681 38 - 205426864 t-ct--GT--ACTATT-ATGA----AA-T---ATATGAGCTTG--A-A-A-ATTTTT
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120148834 38 - 196562556 t-ct--GT--ACTATT-ATGA----AA-T---ATATGAGCTTG--A-A-A-ATTTTT
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  31401 37 +    295523 C-CT--AT--ACTCTT-GTGG----AA-T---ATAGGAACAAG--A-A-A-ACATT-
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3635002 37 +  18214204 C-CT--AT--ACTCTT-GTGG----AA-T---ATAGgaacaag--a-a-a-acatt-
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5024783 37 -   6340057 C-CT--AT--ACTCTT-GTGG----AA-T---ATAGgaacaag--a-a-a-acatt-
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1063811 38 -   1292953 T-CT--AT--ACTGTT-GTGA----AA-T---ATATGAGCTGG--A-A-A-ATGTTT
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188152775 38 - 188283584 t-ct--gt--actatt-atga----aa-t---atatgaGCTTG--A-A-A-ATGTCT
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            48987 38 +     76494 T-CT--GT--ACTATT-ATGA----AA-T---ATATGAGCTTG--A-A-A-ATGTCT
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47510172 38 +  47705337 T-CT--GT--ACTATT-ATGA----AA-T---ACATGAGCTTG--A-A-A-ATGTCT
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 64154 38 -    104429 T-CT--GT--ACTATT-ATGA----AA-T---ATATGAGCTTG--A-A-A-ATGTCT
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  13940 38 -     29451 T-CT--GT--ACTATT-ATGA----AA-T---ACATGAGCTTG--A-A-A-ATGTCT
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                34343 38 +     35859 T-CT--GT--ACTATT-ATGA----AA-T---ATATGAGCTTG--A-A-A-ATGTCT
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    112718 37 -    135482 C-CT--AT--ACTCTT-GTGG----AA-T---ATAAGAACAAG--A-A-A-ACATT-
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           2263 38 -     23713 T-CT--GT--GCCACT-GTGA----AA-T---ATATGAGCTGG--A-A-A-ATGCTT
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            21561 38 -     27972 T-CT--GT--GCCATT-GTGA----AA-T---ATATGAGCTGG--A-A-A-ATGCTT
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      40165 38 -     45160 C-CT--GT--ACTGTT-TTGA----AA-T---ATGTGTGCAGA--G-A-A-ATGATT
i Perognathus_longimembris.PerPac_flattened_line_22291  I 13 C 0
s Peromyscus_maniculatus.KI615518.1                       4947323 26 -   8017169 ------------------TAA----AA-T---AAATGAGTCAG--G-A-A-CTGCCG
i Peromyscus_maniculatus.KI615518.1                     I 4 C 0
s Petromus_typicus.PetTyp_scaffold_33007                     9469 37 -     36578 T-CT--AT--ATTGTT-GTGT----GA-T---A-ATGGTCTTG--A-A-A-ACCCTG
i Petromus_typicus.PetTyp_scaffold_33007                I 22 I 24
s Phocoena_phocoena.PhoPho_flattened_line_11948            118978 38 -    122454 T-CT--AT--ACGATT-GTGA----AA-T---AAATGAGCTGG--A-A-A-AGGCTT
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           2033 38 -      3310 T-CT--GT--ACTATT-ATGA----AA-T---ATATGAGCTTG--A-A-A-ATTTCT
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       21939 38 -     82327 T-CT--GT--ACTATT-ATGA----AA-T---ATATGAGCTTG--A-A-A-ATTTCT
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           18691 38 +     19957 T-CT--GT--ACTATT-ATGA----AA-T---ATATGAGCTTG--A-A-A-ATTTCT
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26736700 38 +  26888534 t-cT--GT--ACTATT-ATGA----AA-T---ATATGAGCTTG--A-A-A-ATTTCT
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            93828 38 +    112873 C-TT--AT--GCTGTTGT-TT----AA-T---ATCTGAGCTGG--A-A-A-ATGCTT
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             40681 38 -     61926 T-CT--GT--ACTATT-ATGA----AA-T---ATGTGAGCTGG--A-A-A-ATTTCT
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        22110 38 +     78826 T-CT--GT--ACTATT-ATGA----AA-T---ATGTGAGCTGG--A-A-A-ATTTCT
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              6061 38 -     15800 T-CT--GT--ACTATT-ATGA----AA-T---ATGTGAGCTGG--A-A-A-ATTTCT
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                         9259 38 -     16101 T-CT--GT--ACTATT-ATGA----AA-T---ATGTGAGCTGG--A-A-A-ATTTCT
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          2568 38 +      9673 T-CT--GT--ACTATT-ATGA----AA-T---ATGTGAGCTGG--A-A-A-ATTTCT
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13471562 38 -  19735023 T-CT--GT--ACTATT-ATGA----AA-T---ATGTGAGCTGG--A-A-A-ATTTCT
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           10470 38 -     31692 T-CT--GT--ACTATT-ATGA----AA-T---ATGTGAGCTGG--A-A-A-ATTTCT
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           3048 38 +     21690 T-CT--AT--ACGATT-GTGA----AA-T---AAATGAGCTGG--A-A-A-ATGCTT
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       19907 38 +     44506 T-CT--GT--AGTATT-ATGA----AA-T---ATGTAAGCTGA--A-A-A-ATTTCT
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        20117 38 +     67491 T-CT--GT--AGTATT-ATGA----AA-T---ATGTAAGCTGA--A-A-A-ATTTCT
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      10362 38 -     98129 T-CT--GT--AGTATT-ATGA----AA-T---ATGTAAGCTGA--A-A-A-ATTTCT
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     19963 38 +    147771 T-CT--GT--AGTATT-ATGA----AA-T---ATGTAAGCTGA--A-A-A-ATTTCT
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        20213 38 -     23762 T-CT--GT--AGTATT-ATGA----AA-T---ATGTAAGCTGA--A-A-A-ATTTCT
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                           679 38 -     55515 T-CT--GT--AGTATT-ATGA----AA-T---ATGTAAGCTGA--A-A-A-ATTTCT
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         20032 38 +    152463 T-CT--GT--AGTATT-ATGA----AA-T---ATGTAAGCTGA--A-A-A-ATTTCT
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      6792 38 +      8943 T-CT--GT--AGTATT-ATGA----AA-T---ATGTAAGCTGA--A-A-A-ATTTCT
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                          9752 38 +    134592 T-CT--GT--AGTATT-ATGA----AA-T---ATGTAAGCTGA--A-A-A-ATTTCT
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          20342 38 -     75465 T-CT--GT--AGTATT-ATGA----AA-T---ATGTAAGCTGA--A-A-A-ATTTCT
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              184225 38 -    373494 t-cT--GT--ACTATT-ATGA----AA-T---ATATGAGCTTG--A-A-A-ATTTTT
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19804132 38 +  19899266 T-CT--GT--ACTATT-ATGA----AA-T---ATATGAGCTTG--A-A-A-ATTTTT
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               2271 38 -     15069 T-CT--GT--ACTATT-ATGA----AA-T---ATATGAGCTTG--A-A-A-ATTTCT
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              2405 38 +     14865 T-CT--GT--ACTATT-ATGA----AA-T---ATATGAGCTTG--A-A-A-ATTTCT
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                73570 39 +     78963 C-CA--AT--ATTGCT-GTGA----AA-T---ACATGAGCTAC--A-AAA-ATGCTT
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6845608 38 +  12164890 t-ct--gt--ACTGTT-GTGA----AA-T---ATATGAGCTGG--A-A-A-ATGGTT
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    664225 38 -   2312742 N-NN--NN--NNNNNN-NNNN----NN-N---NNNNNNNNNNN--N-N-N-NNNNNN
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                          753 38 +     11805 T-CT--AT--ACTGTT-GTGG----AA-T---ATATGAGCTGG--A-A-A-ATGCTT
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           40089 38 +     52369 T-CT--AT--ACTGTT-GTGG----AA-T---ATATGAGCTGG--A-A-A-ATGCTT
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         32477 38 -     44753 T-CT--AT--ACTGTT-GTGG----AA-T---ATATGAGCTGG--A-A-A-ATGCTT
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            14398 38 +     27322 T-CT--AT--ACTGTT-GTGG----AA-T---ATATGAGCTGG--A-A-A-ATGCTT
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       14037 38 -     53241 T-CT--AT--ACTGTT-GTGG----AA-T---ATATGAGCTGG--A-A-A-ATGCTT
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         36309 38 -     48185 T-CT--AT--ACTGTT-GTGG----AA-T---ATATGAGCTGG--A-A-A-ATGCTT
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           30747 38 +     77221 c-ct--AC--ACTGCT-CTAA----AA-T---AAATGAGCCAG--G-A-A-TGGCTT
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            1510 38 -     27784 g-ct--at--actatt-gtaa----aa-t---atatgagctgg--a-a-a-atgttt
i Pteronotus_parnellii.KE867983.1                       C 0 I 20
s Pteronura_brasiliensis.PteBra_flattened_line_1343        243275 37 -    344369 C-CT--AT--ACTGCT-GTGA----AA-T---ACAGGAGCTAG--A-A-A-ATGCT-
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Puma_concolor.QAVW01000427.1                          131531365 37 - 161321710 C-CT--AT--ACTCTT-GTGG----AA-T---ATAggaacaag--a-a-a-acatt-
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             26396 38 +     56732 T-CT--GT--ACTATT-ATGA----AA-T---ATATGAGCTTG--A-A-A-ATTTCT
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6802887 38 +   6970761 T-CT--GT--ACTATT-ATGA----AA-T---ATATGAGCTTG--A-A-A-ATTTCT
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             2280 38 +     18040 T-CT--GT--ACTATT-ATGA----AA-T---ATATGAGCTTG--A-A-A-ATTTCT
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                13452 38 +     68503 T-CT--AT--ATTGTT-GTGA----AA-T---ATATGAGCTGT--A-A-A-ATGTTT
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13912725 38 +  90463843 c-ct--AC--ACTGCT-GTAA----AA-T---AAATGAGTGAG--G-A-G-CTGCTT
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1785439 37 +   2252614 c-CT--AC--ACTGT--CTGA----AA-T---ACATAAGCCTG--A-A-A-ATGCTT
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           12833 38 -     14454 T-CT--GT--ACTATT-ATGA----AA-T---ATATGAGCTTG--A-A-A-ATTTCT
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206374159 38 - 206558726 t-cT--GT--ACTATT-ATGA----AA-T---ATATGAGCTTG--A-A-A-ATTTCT
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44851807 38 -  45163003 T-CT--GT--ACTATT-ATGA----AA-T---ATATGAGCTTG--A-A-A-ATTTCT
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       5256 38 +     12214 T-CT--AT--ACTGTT-GTGA----AA-T---ATATGAGCTGG--A-A-A-ATGTTT
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15669795 38 -  43202129 T-CT--GT--ACTATT-ATGA----AA-T---ATGTGAGCTGG--A-A-a-atttct
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        1658 38 +     34089 T-CT--GT--ACTATT-ATGA----AA-T---ATGTGAGCTGG--A-A-A-ATTTCT
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              1599 38 -     60842 T-CT--GT--ACTATT-ATGA----AA-T---ATGTGAGCTGG--A-A-A-ATTTCT
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              1694 38 +     67014 T-CT--GT--ACTATT-ATGA----AA-T---ATGTGAGCTGG--A-A-A-ATTTCT
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              1672 38 +     60816 T-CT--GT--ACTATT-ATGA----AA-T---ATGTGAGCTGG--A-A-A-ATTTCT
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 1613 38 -     76454 T-CT--GT--ACTATT-ATGA----AA-T---ATGTGAGCTGG--A-A-A-ATTTCT
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17338124 38 -  30362882 T-CT--GT--ACTATT-ATGA----AC-T---ATGTGAGCTGG--A-A-A-ATTTAT
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         17723 38 -     62485 T-CT--GT--ACTATA-ATGA----AC-T---ATGTGAGCTGG--A-A-A-ATTTAT
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   29011 38 -    114521 C-CT--GT--TCTGTT-GTGA----AA-T---AGATGAGCTGA--A-A-A-ATGCAT
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1527475                       24821 38 +     26421 T-CT--GT--ACTATT-ATGA----AA-T---ATATGAGCTTG--A-A-A-ATGTCT
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       5281 38 +     20762 T-CT--GT--ACTATT-ATGA----AA-T---ATATGAGCTTG--A-A-A-ATTTCT
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         39016 38 +     40653 T-CT--GT--ACTATT-ATGA----AA-T---ATATGAGCTTG--A-A-A-ATGTCT
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                            9573 38 -     12194 T-CT--GT--ACTATT-ATGA----AA-T---ATATGAGCTTG--A-A-A-ATTTCT
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     22995 38 -     27512 T-CT--GT--ACTATT-ATGA----AA-T---ATATGAGCTTG--A-A-A-ATGTCT
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         32014 38 -     33692 T-CT--GT--ACTATT-ATGA----AA-T---ATATGAGCTTG--A-A-A-ATTTCT
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   96932 37 -    120886 C-CT--AC--ACTGCT-G-AA----AA-T---AAATGAATCAG--G-A-A-CTGCTT
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            15652 40 +    739146 T-CT--AT--ACTGCT-GTGG----TA-T--AATGTAAACTGA--AAA-A-ATGCTT
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17747863 37 -  27805282 --CT--TG--TCTATT-GTGA----AA-T---GTCTGAGCTGG--A-A-A-ATGCTT
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2237153 38 +   2842873 c-CT--AT--ACTATT-GTGA----AA-T---AAATGAGCCAG--A-A-A-ATGTTT
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             232043 37 -    276980 C-CT--AT--ACTGCT-GGGA----AA-T---ACAGGAGCTAG--A-A-A-ATGCT-
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            24606 37 +     62062 C-CT--AT--ACTCTT-GTGG----AA-T---ATAGGAACAAG--A-A-A-ACATT-
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189269510 38 + 218635234 T-CT--AT--ACTATT-ATGA----AA-T---ATATGAGCTGG--G-A-A-ATATTT
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                     13898987 38 +  13920577 T-TT--GT--ACTATT-ATGA----AA-T---AGATGAGCTTG--A-A-A-ATTTTT
i Symphalangus_syndactylus.tarseq_24                    I 64 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               3457 38 -      6213 C-CT--AT--ACTGTT-GTAA----AA-T---ATATGAGCTGG--A-A-A-ATACTT
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 I 79
s Tamandua_tetradactyla.TamTet_scaffold_26877               12382 31 +     45698 ----------ACT----GTGA----AG-T---ATATGAGCTGA--A-A-AGATGCTT
i Tamandua_tetradactyla.TamTet_scaffold_26877           I 3 I 15
s Tapirus_indicus.TapInd_scaffold_176                      804377 38 +   1148477 C-CT--AT--ACTGTT-GTGA----AA-T---ATATGAGCTGG--A-A-A-ATGCTT
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  55038 38 +     99546 C-CT--AT--ACTGTT-GTGA----AA-T---ATATGAGCTGG--A-A-A-ATGCTT
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               23700 38 +     42269 T-CT--GT--ACTGTT-GTGA----AA-T---ATATGACCGGG--A-A-A-ATGCTT
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               57016 38 +     65473 T-CT--GT--ACTGTT-GTGA----AA-T---ATATGACCGGG--A-A-A-ATGCTT
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194004311 38 - 194193292 t-cT--GT--ACTATT-ATGA----AA-T---ATATGAGCTTG--A-A-A-ATGTCT
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             36560 35 -     47444 T-CT--GT--ACTGTT-TTGT----GA-T---A-AATGTC--A--A-A-A-ATCCTT
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         I 21 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  1258 38 +      6782 C-CT--GT--ACCATT-GTGA----AG-T---ATATAAGCTGA--A-A-A-ATGTTT
i Tolypeutes_matacus.TolMat_scaffold_269431             I 11 I 15
s Tonatia_saurophila.TonSau_scaffold_3334                  133516 38 -    259118 T-CT--AC--ATTGTT-GTAA----AA-T---ATATGAGCTGG--A-A-A-ATGCTT
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        23391 38 +     38948 T-CT--GT--ACTATT-ATGA----AA-T---ATATGAGCTTG--A-A-A-ATTTCT
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   17118 38 -     32910 T-CT--GT--ACTATT-ATGA----AA-T---ATATGAGCTTG--A-A-A-ATTTCT
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       23016 38 +     24652 T-CT--GT--ACTATT-ATGA----AA-T---ATATGAGCTTG--A-A-A-ATTTCT
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      1894 38 -      3559 T-CT--GT--ACTATT-ATGA----AA-T---ATATGAGCTTG--A-A-A-ATTTCT
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           39840 38 -     54611 T-CT--GT--ACTATT-ATGA----AA-T---ATATGAGCTTG--A-A-A-ATTTCT
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       15838 38 +     17312 T-CT--GT--ACTATT-ATGA----AA-T---ATATGAGCTTG--A-A-A-ATTTCT
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    23202 38 -     25040 T-CT--GT--ACTATT-ATGA----AA-T---ATATGAGCTTG--A-A-A-ATTTCT
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          1868 38 +      3528 T-CT--GT--ACTATT-ATGA----AA-T---ATATGAGCTTG--A-A-A-ATTTCT
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  48230 38 +     51589 T-CT--GT--ACTATT-ATGA----AA-T---ATATGAGCTTG--A-A-A-ATTTCT
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       11406 38 +     14732 T-CT--GT--ACTATT-ATGA----AA-T---ATATGAGCTTG--A-A-A-ATTTCT
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       1883 38 -     28054 T-CT--GT--ACTATT-ATGA----AA-T---ATATGAGCTTG--A-A-A-ATTTCT
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44656678 38 -  44834318 T-CT--GT--ACTATT-ATGA----AA-T---ATATGAGCTTG--A-A-A-ATTTCT
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        1688 38 +      3372 T-CT--GT--ACTATT-ATGA----AA-T---ATATGAGCTTG--A-A-A-ATTTCT
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   2853 38 +     90398 T-CT--AT--ACTATT-GTGA----AA-T---ACATGAGCTGG--A-A-A-ATGTTT
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16078962 39 +  31416278 C-TT--AT--ACTGTT-GTGA----AA-T---AGATGAGTTAG--A-AAA-ATGCTT
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2789087 38 -   3938065 C-CT--AT--ATTTTT-GTGA----AG-T---ATTCAAGCTGG--A-A-T-GTGCCC
i Tupaia_chinensis.KB320831.1                           I 1 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    1595 38 +     13056 C-CT--AT--ATTTTT-GTGA----AG-T---ATTCAAGCTGG--A-A-A-GTGCCC
i Tupaia_tana.TupTan_flattened_line_68454               I 1 C 0
s Tursiops_truncatus.MRVK01000923.1                      69311081 38 -  96451834 T-CT--AT--ACGATT-GTGA----AA-T---AAATGAGCTGG--A-A-A-ATGCTT
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 24199 38 -     25548 C-CT--GT--TCAGTT-GTGA----AA-T---AGATGAGCTGG--A-A-A-ATACAT
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6511835 37 +  28682327 c-CT--AT--ACTGCT-GTGA----AA-T---ACAGGAGCTAG--A-A-A-ATGCT-
i Ursus_maritimus.KK498671.1                            I 213 C 0
s Varecia_rubra.k141_432109                                  2447 38 -     20643 T-CT--GT--ACTGTT-GTGA----AA-T---ATATGAGCTGG--A-A-A-ATGGTT
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             21991 38 -     33872 T-CT--GT--ACTGTT-GTGA----AA-T---ATATGAGCTGG--A-A-A-ATGGTT
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1522311 38 -   2331223 T-CT--AT--ACTATT-GTGA----AA-T---ATATGagctgg--a-a-a-atgttc
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                134774 37 -    281493 A-TT--AT--AGTGTT-GTGA----AA-T---ATAGGAGCTAG--A-A-A-ATGCT-
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       124256 36 -    134049 C-CT--GT--ACTGTT-CTGA----AA-C-----ATGAGTGGG--A-A-A-ATATTT
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        211302 37 -    227762 C-CT--AT--ACTGCT-GTGA----AA-T---ATAGGAGCTAG--A-A-A-ATGCC-
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     12479 38 -     20485 C-CT--AT--ACTGTT-GCTA----AA-T---ATATGAGGTAG--A-A-A-ATGCTA
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           4580 38 -      8775 T-CT--AT--ACGATT-GTGA----AA-T---AAATGAGCTGG--A-A-A-ATGCTT
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                16872 121 +    109198 I
e Pteropus_vampyrus.KN525959.1                             601523 113 -   3946241 I
e Pteropus_alecto.KB031157.1                             13243570 113 -  17261082 I
e Hipposideros_galeritus.HipGal_scaffold_104691              5257 10 -      9143 I
e Hipposideros_armiger.JXIK01001085.1                      276098 10 -    477199 I
e Eidolon_helvum.KE772537.1                                  9773 114 +     24177 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16291  1 -    119109 I
e Dolichotis_patagonum.DolPat_scaffold_14102                33375  0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             56104 16 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                14631 16 +     26546 I
e Cavia_tschudii.CavTsc_scaffold_488                       173989  0 +    436027 C
e Cavia_porcellus.DS562889.1                             15795798  0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15783848 16 -  24422027 I

a score=0.000000
s hg38.chr4_GL000008v2_random                                8976 40 +    209709 CAAGTG----CC-----CT----GTA-T-----------A-G---AAT--------------G-GC-CTTCGAAA-TCAAG---------------------GT--ATA
s Acinonyx_jubatus.LLWD01000356.1                         2031062 33 +   3721120 -----------------tt----gaa-t-----------a-a---aat--------------t-gtGCTGTGAAC-TCAAG---------------------GT--ATA
i Acinonyx_jubatus.LLWD01000356.1                       C 0 I 58
s Acomys_cahirinus.AcoCah_scaffold_1625                    109659 40 -    189883 CATATG----CT-----TT----GAA-T-----------A-A---AAT--------------T-GTGCATCAAAT-C-AAG---------------------CT--TTA
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 8 I 35
s Ailuropoda_melanoleuca.LNAT01000321.1                  10654386 33 +  23371972 -----------------TT----CAA-T-----------A-A---AAT--------------T-GTGCTTTGAAT-TCAAG---------------------GT--ATa
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 I 58
s Ailurus_fulgens.LNAC01000003.1                          7091106 33 -  16596857 -----------------TT----CTA-T-----------A-A---AAT--------------T-GTGCTTTGAAT-TCAAG---------------------GT--ATA
i Ailurus_fulgens.LNAC01000003.1                        C 0 I 60
s Allactaga_bullata.AllBul_scaffold_70162                   10061 29 -     22067 CATGTG----CT-----TT----TAA-TTTATTTTTTTTA-A---AA--------------------------------------------------------------
i Allactaga_bullata.AllBul_scaffold_70162               C 0 I 57
s Allenopithecus_nigroviridis.k141_3103707                  59989 41 +     61638 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TCAAG---------------------GT--ATA
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        51797 41 +     53391 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TCAAG---------------------GT--ATA
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         2522 41 +     72529 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TCAAG---------------------GT--GTA
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          2097 41 +      3797 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TCAAG---------------------GT--ATA
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             7286 41 -     18050 CAAATG----CT-----TT----GTA-T-----------A-A---AAT--------------G-GCGCTTCGAAT-TCCAG---------------------GT--ATA
i Alouatta_belzebul.k141_1818029                        C 0 I 52
s Alouatta_caraya.k141_5460                                  8397 41 -     11521 CAAATG----CT-----TT----GTA-T-----------A-A---AAT--------------G-GCGCTTCGAAT-TCCAG---------------------GT--ATA
i Alouatta_caraya.k141_5460                             C 0 I 52
s Alouatta_discolor.k141_811576                              7963 41 -     21359 CAAATG----CT-----TT----GTA-T-----------A-A---AAT--------------G-GCGCTTCGAAT-TCCAG---------------------GT--ATA
i Alouatta_discolor.k141_811576                         C 0 I 52
s Alouatta_juara.k141_1856473                                6340 41 +      7227 CAAATG----CT-----TT----GTA-T-----------A-A---AAT--------------G-GCGCTTCGAAT-TCCAG---------------------GT--ATA
i Alouatta_juara.k141_1856473                           C 0 I 52
s Alouatta_macconnelli.k141_1331706                          7254 41 -     10438 CAAATG----CT-----TT----GTA-T-----------A-A---AAT--------------G-GCGCTTCGAAT-TCCAG---------------------GT--ATA
i Alouatta_macconnelli.k141_1331706                     C 0 I 52
s Alouatta_nigerrima.k141_2718643                            3910 41 +      7047 CAAATG----CT-----TT----GTA-T-----------A-A---AAT--------------G-GCGCTTCGAAT-TCCAG---------------------GT--ATA
i Alouatta_nigerrima.k141_2718643                       C 0 I 52
s Alouatta_palliata.k141_1316127                             7196 41 +     10410 CAAGTG----CT-----TT----GTA-T-----------A-A---AAT--------------G-GCGCTTCGAAT-TCCAG---------------------GT--ATA
i Alouatta_palliata.k141_1316127                        C 0 I 52
s Alouatta_puruensis.k141_1284840                             999 41 -      4927 CAAATG----CT-----TT----GTA-T-----------A-A---AAT--------------G-GCGCTTCGAAT-TCCAG---------------------GT--ATA
i Alouatta_puruensis.k141_1284840                       C 0 I 52
s Alouatta_seniculus.k141_990213                             3927 41 +      6429 CAAATG----CT-----TT----GTA-T-----------A-A---AAT--------------G-GCGCTTCGAAT-TCCAG---------------------GT--ATA
i Alouatta_seniculus.k141_990213                        C 0 I 52
s Ammotragus_lervia.NIVO01013474.1                        3517817 39 +   4113121 CATGTG----CC-----TT----GAA-T-----------A-A---AAC--------------G-GTGCTTAAAAT-TCAAG---------------------GT----A
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      388001 41 -    631301 CACGTG----TG-----TT----AAG-T-----------A-A---AAT--------------G-GTGCTTCAAAT-TCAAG---------------------GT--ATA
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            28417 41 +     33004 CATGTG----CC-----TT----GAA-A-----------A-A---AAT--------------G-GTTCTTAAAAT-TCAAG---------------------GT--ATA
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 59645 41 +     78111 CAAATG----CT-----TT----GTA-T-----------A-C---AAT--------------G-CCGCTTCGAAT-TCCAG---------------------GT--ATA
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            2572 41 +     22701 CAAATG----CT-----TT----GTA-T-----------A-C---AAT--------------G-CCGCTTCGAAT-TACAG---------------------GT--ATA
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5746530 41 +   9889416 CAAATG----CT-----TT----GTA-T-----------A-C---AAT--------------G-CCGCTTCGAAT-TCCAG---------------------GT--ATA
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             3115 41 -    104377 CAAATG----CT-----TT----GTA-T-----------A-C---AAT--------------G-CCGCTTCGAAT-TCCAG---------------------GT--ATA
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               3121 41 +     23246 CAAATG----CT-----TT----GTA-T-----------A-C---AAT--------------G-CCGCTTCGAAT-TCCAG---------------------GT--ATA
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     1144 41 +      5067 CATGTG----CT-----TT----GAA-T-----------A-A---AAT--------------G-ATGCTTCAAAT-TTAAG---------------------AT--ATA
i Aplodontia_rufa.AprRuf_scaffold_156013                I 8 I 57
s Arctocebus_calabarensis.k141_1161114                      15105 41 +     17483 CATGAA----CC-----TT----GAA-T-----------A-A---AAT--------------G-GTACTTTGAAT-TTTAG---------------------GT--ATA
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 6387 41 -     29036 CATGTG----TG-----TT----AAG-T-----------A-A---AAT--------------G-GTGCTTCAAAT-TTAAG---------------------AT--ATA
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9536387 41 +  39197703 CAAATG----CT-----TT----GTA-T-----------A-A---AAT--------------G-GCGCTTTGAAT-TCCAG---------------------GT--ATA
i Ateles_geoffroyi_b.tarseq_2582                           C 0 I 52
s Ateles_belzebuth.k141_1348307                             57671 41 +     85812 CAAATG----CT-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTCGAAT-TCCAG---------------------GT--ATA
i Ateles_belzebuth.k141_1348307                         C 0 I 52
s Ateles_chamek.k141_1072810                                 8670 41 +     89302 CAAATG----CT-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTCGAAT-TCCAG---------------------GT--ATA
i Ateles_chamek.k141_1072810                            C 0 I 52
s Ateles_geoffroyi_a.k141_1300742                             13180 41 -     58268 CAAATG----CT-----TT----GTA-T-----------A-A---AAT--------------G-GCGCTTTGAAT-TCCAG---------------------GT--ATA
i Ateles_geoffroyi_a.k141_1300742                         C 0 I 52
s Ateles_marginatus.k141_899112                             61166 41 +    119057 CAAATG----CT-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTCGAAT-TCCAG---------------------GT--ATA
i Ateles_marginatus.k141_899112                         C 0 I 52
s Ateles_paniscus.k141_1631200                               3117 41 -     25888 CAAATG----CT-----TT----GTA-T-----------A-A---AAT--------------G-GCGCTTCGAAT-TCCAG---------------------GT--ATA
i Ateles_paniscus.k141_1631200                          C 0 I 52
s Avahi_laniger.k141_2840928                                 3864 41 -     16375 CATGTG----CC-----TT----GAA-T-----------A-A---AAT--------------G-GTACTTAAAAT-TCAAG---------------------GT--ATA
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                               184 41 +      2719 CATGTG----CC-----TT----GAA-T-----------A-A---AAT--------------G-GTACTTAAAAT-TCAAG---------------------GT--ATA
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26377835 41 +  51448160 CATGTG----CC-----TT----GAA-T-----------A-A---AAC--------------G-CTGCTTAAAAT-TCAAG---------------------GT--ATA
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        3066 41 -     13118 CATGTG----CC-----TT----GAA-G-----------A-A---AAC--------------G-CTGCTTAAAAT-TCAAG---------------------GT--ATA
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   40913 41 -     72089 CATGTG----CC-----TT----GAA-T-----------A-A---AAT--------------G-GTGCTTAAAAT-TCAAG---------------------GTAT--A
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6556925 41 +   6870073 CATGTG----CC-----TT----GAA-T-----------A-A---AAT--------------A-GTGCTTAAAAT-TCAAG---------------------GT--ATA
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138137161 41 - 161108492 CATGNG----CC-----TT----GAA-T-----------A-A---AAT--------------A-GTGCTTAAAAT-TCAAG---------------------GT--ATA
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     569535 41 -    998990 CATGTG----CC-----TT----GAA-T-----------A-A---AAT--------------A-GTGCTTAAAAT-TCAAG---------------------GT--ATA
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136292894 41 - 158972876 CATGTG----CC-----TT----GAA-T-----------A-A---AAT--------------A-GTGCTTAAAAT-TCAAG---------------------GT--ATA
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1228650 41 -   1914593 CATGTG----CC-----TT----GAA-T-----------A-A---AAT--------------A-GTGCTTAAAAT-TCAAG---------------------GT--ATA
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               111006 41 -    171031 CAAATG----CT-----TT----GTA-T-----------A-A---AAT--------------G-GCGCTTCGAAC-CCCAA---------------------GT--ATA
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 10032 41 +    125063 CAAATG----CT-----TT----GTA-T-----------A-A---AAT--------------G-GCGCTTCGAAC-CCCAA---------------------GT--ATA
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                12080 41 -    216513 CAAATG----CT-----TT----GTA-T-----------A-A---AAT--------------G-GCGCTTCGAAC-CCCAA---------------------GT--ATA
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        4620 41 -    134917 CAAATG----CT-----TT----GTA-T-----------A-A---AAT--------------G-GCGCTTCGAAC-CCCAA---------------------GT--ATA
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3217269 36 -   8989139 CACGTG----CC-----TT----GAA-T-----------A-A---AAT--------------G-CTGCTTAAAAT-Tcaag----------------------------
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           394973 36 -  15254737 CACGTG----CC-----TT----GAA-T-----------A-A---AAT--------------G-CTGCTTAAAAT-tcaag----------------------------
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2970707 36 +   6889770 CACGTG----CC-----TT----GAA-T-----------A-A---AAT--------------G-CTGCTTAAAAT-tcaag----------------------------
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11515765 33 +  39901454 -----------------TT----CAA-T-----------A-A---AAT--------------T-GTGCTTTGAAT-TCAAG---------------------GT--ATA
i CanFam4.chr31                                         C 0 I 58
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   10783 33 +     87036 -----------------TT----CAA-T-----------A-A---AAT--------------T-GTGCTTTGAAT-TCAAG---------------------GT--ATA
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 I 58
s Canis_lupus_dingo.QKWQ01001993.1                       11262426 33 -  35597290 -----------------TT----CAA-T-----------A-A---AAT--------------T-GTGCTTTGAAT-TCAAG---------------------Gt--ata
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 I 58
s Canis_lupus_familiaris.chr31                           11084955 33 +  39895921 -----------------TT----CAA-T-----------A-A---AAT--------------T-GTGCTTTGAAT-TCAAG---------------------Gt--ata
i Canis_lupus_familiaris.chr31                          C 0 I 58
s Canis_lupus_orion.HG994411.1                           16451979 33 -  44759192 -----------------TT----CAA-T-----------A-A---AAT--------------T-GTGCTTTGAAT-TCAAG---------------------Gt--ata
i Canis_lupus_orion.HG994411.1                          C 0 I 58
s Capra_aegagrus.CM003214.1                              21322922 39 + 157394656 CATGTG----CC-----TT----GAA-T-----------A-A---AAT--------------G-GTGCTTAAAAT-TCAAG---------------------GT----A
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135704149 39 - 157403528 CATGTG----CC-----TT----GAA-T-----------A-A---AAT--------------G-GTGCTTAAAAT-TCAAG---------------------GT----A
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_647363                  1675 19 +      1887 --------------------------------------------------------------------TTCCAGTTTCTGG---------------------GTA-ATA
i Capromys_pilorides.CapPil_scaffold_647363             I 24 C 0
s Carlito_syrichta.NW_007248099.1                          306257 46 +    345090 CATGTG----CAGTACATT----GAA-T-----------A-A---AAT--------------G-GTGCTTCTGAT-TCATG---------------------GT--ATA
i Carlito_syrichta.NW_007248099.1                       C 0 I 23
s Carollia_perspicillata.CarPer_scaffold_4436               57185 41 +     67245 CATGTG----TG-----TT----AAG-T-----------A-A---AAT--------------G-GTGCCTCAAAT-TCAAG---------------------GT--ATA
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   27673 41 +     33760 CATGTG----CT-----TT----GAA-T-----------A-A---AAT--------------G-GTGCTGCAAGT-TCAAG---------------------GT--ATA
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   156480 41 -    276539 CATGTA----CC-----TT----GAA-T-----------A-A---AAT--------------G-GTGCTTAAAAT-TCAAG---------------------GT--ATA
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 I 60
s Cavia_aperea.AVPZ01000278.1                            15783864 16 -  24422027 ----------------------------------------------------------------------CCAAT-TCTAG---------------------GT-gata
i Cavia_aperea.AVPZ01000278.1                           I 16 C 0
s Cavia_porcellus.DS562889.1                             15795798 16 -  24440124 ----------------------------------------------------------------------CCAAT-TCTAG---------------------GT-gata
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       173989 16 +    436027 ----------------------------------------------------------------------CCAAT-TCTAG---------------------GT-GATA
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18887858 41 -  29618158 CAAATG----CT-----TT----GTA-T-----------A-A---AAT--------------G-GCATTTCAAAT-TCCAG---------------------GT--ATG
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 5402 41 -     26817 CAAATG----CT-----TT----GTA-T-----------A-A---AAT--------------G-GCATTTCAAAT-TCCAG---------------------GT--ATG
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                 9645 41 +     25043 CAAATG----CT-----TT----GTA-T-----------A-A---AAT--------------G-GCATTTCAAAT-TCCAG---------------------GT--ATG
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         5294 46 +     21754 CATGTG----CAGAACATT----GAA-T-----------A-A---AAT--------------G-GTGCTTCTGAT-TCACG---------------------GT--ATA
i Cephalopachus_bancanus.k141_702587                    C 0 I 23
s Ceratotherium_simum.JH767818.1                          4360976 41 +   7569818 CATGTG----CT-----TT----GAA-T-----------A-A---AAT--------------T-GTACTTCAAAT-TCAAG---------------------GT--ATA
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623          731 41 -      9338 CATGTG----CT-----TT----GAA-T-----------A-A---AAT--------------T-GTACTTCAAAT-TCAAG---------------------GT--ATA
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6551781 41 +   6739814 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TCAAG---------------------GT--ATA
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      53258 41 -     54931 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TCAAG---------------------GT--ATA
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         18242 41 -     19697 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TCAAG---------------------GT--ATA
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         55773 41 -    107033 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TCAAG---------------------GT--ATA
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        2218 41 -      3853 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TCAAG---------------------GT--ATA
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          26151 41 +     30494 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TCAAG---------------------GT--ATA
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           2175 41 -      4022 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TCAAG---------------------GT--ATA
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          2068 41 -      3505 CAAGTG----CC-----TT----GTA-T-----------G-A---AAT--------------G-GCACTTTGGAT-TCAAG---------------------GT--ATA
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           20858 41 +     35983 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGAAT-TCAAG---------------------GT--ATA
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11987394 41 +  12117833 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TCAAG---------------------GT--ATA
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46474147 41 +  46592721 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TCAAG---------------------GT--ATA
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      31974 41 +     33420 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TCAAG---------------------GT--ATA
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        2010 41 -      3443 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TCAAG---------------------GT--ATA
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      3001 41 -      4669 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAG-TCAAG---------------------GT--ATA
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        2801 41 -      4411 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TCAAG---------------------GT--ATA
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         2326 41 -      4205 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TCAAG---------------------GT--ATA
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_1070855           550 25 -      1715 ---------------------------------------------AAT--------------G-ATGCTTCAAGT-TCAAG---------------------GT--AAA
i Chaetophractus_vellerosus.ChaVel_scaffold_1070855     I 14 C 0
s Cheirogaleus_major.k141_1157592                           56170 40 -     68416 CATGTG----C------TT----GAA-T-----------A-A---AAT--------------G-GTACTTAGAAT-TCAAG---------------------GT--ATA
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            5216 40 +     13308 CATGTA----C------TT----GAA-T-----------A-A---AAT--------------G-GTACTTAGAAT-TCAAG---------------------GT--ATA
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             2680 41 -     18223 CAAATG----CT-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTCAAAC-CCCAA---------------------GT--ATA
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             19703 41 +     25473 CAAATG----CT-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTCAAAC-CCCAA---------------------GT--ATA
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           38742 41 +     57117 CAAATG----CT-----TT----GTA-T-----------A-A---AAT--------------G-GCGCTTCAAAC-CCCAA---------------------GT--ATA
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          43417 41 +     54541 CAAATG----CT-----TT----GTA-T-----------A-A---AAT--------------G-GCGCTTCAAAC-CCCAA---------------------GT--ATA
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15959013 18 +  43084221 CATGTA----CT-----TT----GAA-T-----------A-A---AA--------------------------------------------------------------
i Chinchilla_lanigera.JH721867.1                        C 0 I 18
s Chiropotes_israelita.k141_1189915                         68227 41 +    196370 CAAATG----CT-----TT----GTA-T-----------A-A---AAT--------------G-GCGCTTCGAAC-CCCAA---------------------GT--ATA
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          12408 41 +     40510 CAAATG----CT-----TT----GTA-T-----------A-A---AAT--------------G-GTGCTTCGAAC-CCCAA---------------------GT--ATA
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15135608 41 -  15256731 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TCAAG---------------------GT--ATA
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      30654 41 -     53260 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TCAAG---------------------GT--ATA
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101141103 41 + 101219884 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TCAAG---------------------GT--ATA
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                14153 25 -     21363 ---------------------------------------------AAC--------------G-GTGCTTCAAGT-TCAAA---------------------GT--ATA
i Choloepus_didactylus.ChoDid_scaffold_36182            I 12 C 0
s Choloepus_hoffmanni.KN194586.1                           759463 25 +    964067 ---------------------------------------------AAC--------------G-GTGCTTCAAGT-TCAAA---------------------GC--ATA
i Choloepus_hoffmanni.KN194586.1                        I 12 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_141308              6266 26 -     12508 -----------------------------------------A---AAT--------------G-GTGTTCCAAAT-TTAAG---------------------GT--ATA
i Chrysochloris_asiatica.ChrAsi_scaffold_141308         I 13 I 30
s Colobus_angolensis.KN985967.1                          10879682 41 +  10971483 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TCAAG---------------------GT--ATA
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147660840 41 + 156195979 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TCAAG---------------------GT--ATA
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            12827 41 +     23629 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TCAAG---------------------GT--ATA
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60610444 40 +  78930452 TATGTG----CT-----GT----GAA-T-----------A-A---AAT--------------G-GCGTT-CAACT-TCAAG---------------------TC--ACA
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         36893 41 -     40477 CATGTG----CC-----TG----AAA-T-----------A-C---GAT--------------G-ATGCTTCAAAT-TCAAG---------------------GT--ATA
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 274753 40 -    399297 CATGTG----CT-----TT----GAA-T-----------A-A---AAT--------------C-ATGCTTCAAAT-T-AAA---------------------CT--ATA
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 I 34
s Cricetulus_griseus.LT883672.1                          53026286 40 +  72327488 CGTATG----CT-----TT----GAA-T-----------A-A---GAT--------------C-TCACTTCACAT-T-CAA---------------------CT--ATA
i Cricetulus_griseus.LT883672.1                         C 0 I 34
s Crocidura_indochinensis.CroInd_scaffold_38409             17201 23 -     19186 -----------------------------------------------T--------------A-GTGTTTATAAT-GCAAG---------------------GT--GTA
i Crocidura_indochinensis.CroInd_scaffold_38409         I 14 I 249
s Cryptoprocta_ferox.CryFer_flattened_line_19014            49078 33 -     70449 -----------------TT----GAA-T-----------A-A---AAT--------------T-GTGCTTTGAAT-TCAAG---------------------GT--ATA
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 I 54
s Ctenodactylus_gundi.CteGun_scaffold_447                  205456 41 -    956709 CATTCG----CA-----TT----GAA-T-----------A-A---AAT--------------G-ATGCTTCATAT-TTAAG---------------------GT--ATA
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 I 61
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 27809 19 -     67205 --------------------------------------------------------------------TTCCAATTTCTAG---------------------GTA-ACA
i Ctenomys_sociabilis.CteSoc_scaffold_19489             I 24 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                14647 16 +     26546 ----------------------------------------------------------------------CCAAT-TCTAG---------------------GT-GATA
i Cuniculus_paca.CunPac_flattened_line_16637            I 16 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             56120 16 -    236241 ----------------------------------------------------------------------CCAAT-TCTAG---------------------GT-GATA
i Dasyprocta_punctata.DasPun_flattened_line_634         I 16 C 0
s Dasypus_novemcinctus.JH568778.1                          179359 25 -   6883506 ---------------------------------------------AAT--------------G-GCACTTCAATT-TCAAG---------------------GT--ATA
i Dasypus_novemcinctus.JH568778.1                       I 15 C 0
s Daubentonia_madagascariensis.ctg11                     16842037 41 +  31942871 CATGTG----CC-----TT----GAA-T-----------A-A---AAT--------------G-GTACTTAGAAT-TCAAG---------------------GT--ATA
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80034519 41 -  96802777 CATGTG----CC-----TT----GAA-T-----------A-A---AAT--------------G-CTGCTTAAAAT-TCAAG---------------------GT--ATA
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18696497 41 -  18957592 CACGTG----TG-----TT----AAG-T-----------A-A---AAT--------------G-GTGCTTCAAAG-TCAAG---------------------GT--ATA
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 319637 41 +    993696 CATGTG----CT-----TT----GAA-T-----------A-A---AAT--------------T-GTACTTCAAAT-TCAAG---------------------GT--ATA
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                    277 41 +    151128 CATGTG----CT-----TT----GAA-T-----------A-A---AAT--------------T-GTACTTCAAAT-TCAAG---------------------GT--ATA
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   154904 18 +    228994 CATGTG----AT-----TT----GAA-T-----------A-A---AA--------------------------------------------------------------
i Dinomys_branickii.DinBra_scaffold_1996                C 0 I 18
s Dipodomys_ordii.KN672545.1                              3652653 40 +   4240102 CATGTG----CT-----TG----AAA-T-----------G-C---AGT--------------G--AGCTTCACAC-TCAAT---------------------GT--ATA
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 24208 40 +     28912 CATGTG----CT-----TG----AAA-T-----------G-C---AGT--------------G--AGCTTCATAC-TCAAT---------------------GT--ATA
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                33375 16 -     73477 ----------------------------------------------------------------------CCAAT-TCTAC---------------------GT-GATA
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.AAIY02274224.1                             40 41 +      1655 cacaGG----CT-----TT----GGA-A-----------A-A---AGT--------------G-GTGCTTCACAT-ACAAG---------------------GT--ACg
i Echinops_telfairi.AAIY02274224.1                      C 0 C 0
s Eidolon_helvum.KE772537.1                                  9887 28 +     24177 -------------------------A-T-----------A-A---AAT--------------G-GTCCTT-CAAT-TCAAC---------------------CT--GTA
i Eidolon_helvum.KE772537.1                             I 114 I 67
s Elaphurus_davidianus.JRFZ01086400.1                     1489181 41 +   1727528 CATGTG----CC-----TT----GAA-T-----------A-A---AAT--------------G-GTGCTTAAAAT-TCAAG---------------------GT--ATA
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7803937 30 +  15467074 CTTGTG----CT-----GT----GG--G-----------A-A---AAT--------------G-TTGGTTCAAAT----------------------------------
i Elephantulus_edwardii.JH947210.1                      C 0 I 3
s Ellobius_lutescens.LOEQ01003611.1                        236942 40 -    369425 CATGTG----CT-----TT----GAA-T-----------G-G---AAT--------------C-ATGCTTCAAAT-T-AAA---------------------CT--ATA
i Ellobius_lutescens.LOEQ01003611.1                     I 8 I 35
s Ellobius_talpinus.LOJH01090055.1                           3958 40 -      7838 CATGTG----CT-----TT----GAA-T-----------G-A---AAT--------------C-AAACTTCAAAT-T-AAA---------------------CT--ATA
i Ellobius_talpinus.LOJH01090055.1                      I 8 I 35
s Enhydra_lutris.KZ291749.1                              85868836 33 +  99434291 -----------------CT----CAA-T-----------A-A---AAT--------------T-GTGCTTTCAAT-TCAAG---------------------GT--ATA
i Enhydra_lutris.KZ291749.1                             C 0 I 59
s Equus_asinus.JREZ01000062.1                             5850357 41 -   7175178 CATGTG----CT-----TT----GAA-T-----------A-A---AAT--------------T-GCACTTAAAAT-TCTAG---------------------GT--ATA
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13348859 41 +  41866177 CATGTG----CT-----TT----GAA-T-----------A-A---AAT--------------T-GCACTTAAAAT-TCTAG---------------------GT--ATA
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          10349 41 +     92910 CATGTG----CT-----TT----GAA-T-----------A-A---AAT--------------T-GCACTTAAAAT-TCTAG---------------------GT--ATA
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11530155 41 +  16010500 CATATG----CT-----CG----GAA-T-----------A-A---AAT--------------G-GAGCTTCAAGT-TCAAG---------------------GT--ATA
i Erinaceus_europaeus.JH835290.1                        I 211 I 17
s Erythrocebus_patas.Contig8                             48767786 41 -  48907691 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TCAAG---------------------GT--ATA
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          312721 41 +    330699 CATGTG----CC-----TT----GAA-T-----------A-A---AAT--------------G-CTGCTTAAAAT-TCAAG---------------------GT--ATA
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             59151 41 +     89355 CATGTG----CC-----TT----GAA-T-----------A-A---AAT--------------G-CTGCTTAAAAT-TCAAG---------------------GT--ATA
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              2217 41 +     13586 CATGTG----CC-----TG----GAA-T-----------A-A---AAT--------------T-GTACTTATAAT-TCAAG---------------------GT--ATA
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               2152 41 -      6809 CATGTG----CC-----TC----GAA-T-----------A-A---AAT--------------T-GTACTTATAAT-TCAAG---------------------GT--ATA
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             8625 41 +     36558 CATGTG----CC-----TC----GAA-T-----------A-A---AAT--------------T-GTACTTATAAT-TCAAG---------------------GT--ATA
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             4941 41 +     60246 CATGTG----CC-----TC----GAA-T-----------A-A---AAT--------------T-GTACTTATAAT-TCAAG---------------------GT--ATA
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 8429 41 +    109717 CATGTG----CC-----TC----GAA-T-----------A-A---AAT--------------T-GTACTTATAAT-TCAAG---------------------GT--ATA
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               12803 41 +     16540 CATGTG----CC-----TC----GAA-T-----------A-A---AAT--------------T-GTACTTATAAT-TCAAG---------------------GT--ATA
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                13079 41 +     27497 CATGTG----CC-----TC----GAA-T-----------A-A---AAT--------------T-GTACTTATAAT-TCAAG---------------------GT--ATA
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           15541 41 +     26808 CATGTG----CC-----TT----GAA-T-----------A-A---AAT--------------T-GTACTTATAAT-TCAAG---------------------GT--ATA
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                30269 41 +     46535 CATGTG----CC-----TC----GAA-T-----------A-A---AAT--------------T-GTACTTATAAT-TCAAG---------------------GT--ATA
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              12992 41 -     29447 CATGTG----CC-----TC----GAA-T-----------A-A---AAT--------------T-GTACTTATAAT-TCAAG---------------------GT--ATA
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129890039 33 - 159252932 -----------------tt----gaa-t-----------a-a---aat--------------t-gtGCTGTGAAC-TCAAG---------------------GT--ATA
i Felis_catus.CM001386.2                                C 0 I 58
s Felis_catus_fca126.CM031420.1                         129277114 33 - 158578461 -----------------tt----gaa-t-----------a-a---aat--------------t-gtgCTGTGAAC-TCAAG---------------------GT--ATA
i Felis_catus_fca126.CM031420.1                         C 0 I 58
s Felis_nigripes.FelNig_flattened_line_8080                 18248 33 +     52776 -----------------TT----GAA-T-----------A-A---AAT--------------T-GTGCTGTGAAC-TCAAG---------------------GT--ATA
i Felis_nigripes.FelNig_flattened_line_8080             C 0 I 58
s Fukomys_damarensis.KN123630.1                          13890003 18 -  19261668 --------------------------------------------------------------------GTCAGAT-TCTAG---------------------Gt-gata
i Fukomys_damarensis.KN123630.1                         I 26 C 0
s Galago_moholi.ctg555                                     208164 41 -    847004 CATGAG----CT-----TT----GAA-T-----------A-A---AAT--------------G-GTACTTGGAAT-TTAAG---------------------GC--ATA
i Galago_moholi.ctg555                                  C 0 I 58
s Galago_senegalensis.k141_964197                           10545 41 -     43889 CATGAG----CT-----TT----GAA-T-----------A-A---AAT--------------G-GTACTTGGAAT-TTAAG---------------------GC--ATA
i Galago_senegalensis.k141_964197                       C 0 I 58
s Galagoides_demidoff.k141_1769638                           7613 40 +     27357 CATGAG----TC-----TT----GAA-T-----------A-A---AAT--------------G-GTACTTTG-AC-TTAAG---------------------GC--ATA
i Galagoides_demidoff.k141_1769638                      C 0 I 58
s Galeopterus_variegatus.GalVar_scaffold_354               153494 40 +    324696 CATGTG----CT-----TT----GAA-T-----------A-A---A-T--------------G-ATACTTTGAAT-TCAAG---------------------GT--ATA
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    178695 41 -    189561 TATGTG----CC-----TT----GAA-T-----------A-A---AAT--------------G-TTGCTTAAAAT-TCAAG---------------------GT--ATA
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                            9898 41 -     18683 TGTGTG----CT-----TT----GAA-T-----------A-A---AAT--------------G-GTGCTTCAAAT-GCATG---------------------GT--ATA
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               2375 41 -     14630 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCATTTCGAAT-TCAAG---------------------GT--ATA
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119649474 41 - 195582420 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCATTTCGAAT-TCAAG---------------------GT--ATA
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   74441 41 +    118900 CATGTG----CT-----TT----GAA-T-----------A-A---GAT--------------G-GCGCTTCAAAT-GCAAG---------------------GT--ATA
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 I 55
s Hapalemur_alaotrensis.k141_1198205                         2787 41 +      3980 CATGTG----CC-----TT----GAA-T-----------A-A---AAT--------------T-GTACTTATAAT-TCAAG---------------------GT--ATA
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             25262 41 +     26611 CATGTG----CC-----TT----GAA-T-----------A-A---AAT--------------T-GTACTTATAAT-TCAAG---------------------GT--ATA
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             2723 42 +     56096 CATGTG----CC-----TT----GAATT-----------A-A---AAT--------------T-GTACTTATAAT-TCAAG---------------------GT--ATA
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        25998 42 -     42470 CATGTG----CC-----TT----GAATT-----------A-A---AAT--------------T-GTACTTATAAT-TCAAG---------------------GT--ATA
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        42593 41 -     54384 CATGTG----CC-----TT----GAA-T-----------A-A---AAT--------------T-GTACTTATAAT-TCAAG---------------------GT--ATA
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              14284 33 +     53719 -----------------TT----GAA-T-----------A-A---AAT--------------T-ATGCTTTGAAT-TCAAG---------------------GT--ATA
i Helogale_parvula.HelPar_flattened_line_22962          C 0 I 58
s Hemitragus_hylocrius.HemHyl_scaffold_16669                25195 39 -     91191 CATGTG----CC-----TT----GAA-T-----------A-A---AAT--------------G-GTGCTTAAAAT-TCAAG---------------------GT----A
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2548380 18 +  31725842 --------------------------------------------------------------------TTCCAAT-TCGAG---------------------GT-GGTA
i Heterocephalus_glaber.JH602058.1                      I 23 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               53746 42 +     73687 TATGTG----CT-----TT----GAA-A-----------A-A---AAT--------------GGGTGCTTCATAT-TTAAG---------------------AC--ATA
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 I 6
s Hippopotamus_amphibius.HipAmp_scaffold_1308              144754 41 +    277961 CATGTG----CC-----TT----GAA-C-----------A-A---AAT--------------G-GTGCTTAATAT-TCAAG---------------------GT--ATA
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      276108 18 -    477199 -------------------------------------------------------------------CCTCAAAT-TCAAG---------------------GT--ATT
i Hipposideros_armiger.JXIK01001085.1                   I 10 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              5267 18 -      9143 -------------------------------------------------------------------CCTCAAAT-TCAAG---------------------AT--ATT
i Hipposideros_galeritus.HipGal_scaffold_104691         I 10 C 0
s Hoolock_leuconedys.ctg79                                       265 41 -   7690867 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGAAT-TCAAG---------------------GT--ATA
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 13351 33 -     67322 -----------------TT----GAC-T-----------A-A---AAT--------------T-GTGCTTTGAAT-TCAAG---------------------GT--ACA
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 I 58
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16292 10 -    119109 -----------------------------------------------------------------------------CTAG---------------------GT-GATA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       I 1 I 53
s Hylobates_abbotti.k141_493872                              2192 41 +      5897 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGAAT-TCAAG---------------------GT--ATA
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_282275                               1404 41 +      1846 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGAAT-TCAAG---------------------GT--ATA
i Hylobates_agilis.k141_282275                          I 102 C 0
s Hylobates_klossii.k141_584463                               568 41 -      1009 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGAAT-TCAAG---------------------GT--ATA
i Hylobates_klossii.k141_584463                         I 38 C 0
s Hylobates_pileatus_b.ContigUN                                 14621737 41 -  25970782 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGAAT-TCAAG---------------------GT--ATA
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1133650                            1626 41 -      2775 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGAAT-TCAAG---------------------GT--ATA
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             30229 41 -     60944 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGAAT-TCAAG---------------------GT--ATA
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     3387 42 +     22540 CAAGTG----CT-----TT----GAA-G-----------A-A---AAG--------------G-GTGCTTCCCAT-TCTAG---------------------GT-GATA
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7123275 41 +  13083262 CATGTG----CT-----TT----AAA-T-----------A-A---AAT--------------G-GTGCTTCAAAT-TCAAG---------------------GT--ATA
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 I 53
s Indri_indri.k141_1884019                                    458 41 -      2196 CATGTG----CC-----TT----GAA-T-----------A-A---AAT--------------G-GTACTTAAAAT-TCAAG---------------------GT--ATG
i Indri_indri.k141_1884019                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               6506 41 +     17520 CATGTG----CC-----TT----GAA-T-----------A-A---AAT--------------G-CTGCTTCAAAT-TCAAG---------------------GT--ATA
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 I 2
s Jaculus_jaculus.JH725517.1                              8562810 42 +  11848649 ----------------------------------------------------------------GTACTTCAAAT-TCAATTCATAGAAAAGCACCTCAAATGT--ATA
i Jaculus_jaculus.JH725517.1                            I 24 I 36
s Kogia_breviceps.KogBre_flattened_line_35920               21339 41 +     37189 CATGTG----CC-----TT----GAA-T-----------A-A---AAT--------------G-CTGCTTAAAAT-TCAAG---------------------GT--ATA
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          47241 41 -    147782 CAAATG----CT-----TT----GTA-T-----------A-A---AAT--------------G-GCGCTTCGAAT-TCCAG---------------------GT--ATG
i Lagothrix_lagothricha.k141_12968                      C 0 I 52
s Lasiurus_borealis.LasBor_scaffold_5102                   111259 41 -    115756 CATGTA----CC-----TT----AAA-T-----------A-A---AAT--------------G-GTACCTCAAAT-TCAAG---------------------TT--ATA
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 I 30
s Lemur_catta.scaffold_1                                258404271 41 - 285822530 CATGTG----CC-----TT----GAA-T-----------A-A---AAT--------------T-GTACTTATAAT-TCAAG---------------------GT--ATA
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        21164 41 +     39228 CATGTG----CC-----TT----GAA-T-----------A-A---AAT--------------G-GTACTTAGAAT-TCAAG---------------------GT--ATA
i Lepilemur_ankaranensis.k141_884009                    C 0 I 58
s Lepilemur_dorsalis.k141_134267                            50537 41 +     63517 CATGTG----CC-----TT----GAA-T-----------A-A---AAT--------------G-GTACTTAGAAT-TCAAG---------------------GT--ATA
i Lepilemur_dorsalis.k141_134267                        C 0 I 58
s Lepilemur_ruficaudatus.k141_617879                        75758 41 +    116806 CATGTG----CC-----TT----GAA-T-----------A-A---AAT--------------G-GTACTTAGAAT-TCAAG---------------------GT--ATA
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     28802 41 -     33031 CATGTG----CC-----TT----GAA-T-----------A-A---AAT--------------G-GTACTTAGAAT-TCAAG---------------------GT--ATA
i Lepilemur_septentrionalis.k141_578524                 C 0 I 58
s Leptonychotes_weddellii.KB714749.1                      3083054 33 -   3498232 -----------------TT----CAA-T-----------A-A---AAT--------------T-ATGCTTTGAAT-TCGAG---------------------AT--ATA
i Leptonychotes_weddellii.KB714749.1                    C 0 I 58
s Lepus_americanus.LepAme_scaffold_62849                    10250 40 +     22452 CATAC-----TT-----AT----GAA-T-----------A-A---AAT--------------G-GTGCTTCAAAG-TCAAG---------------------AT--ATA
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            133676 41 +   3060487 CATGTG----CC-----TT----GCA-T-----------A-A---AAT--------------G-CTGCTTAAAAT-TCAAG---------------------GT--ATA
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19244869 41 +  19376315 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TCAAG---------------------GT--ATA
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            7905 41 +     84689 CATGAG----CC-----TT----GAA-T-----------A-A---AAT--------------G-GTACTTTGAAT-TTAAG---------------------GT--ATA
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3775656 41 +   6799190 CATGAG----CC-----TT----GAA-T-----------A-A---AAT--------------G-GTACTTTGAAT-TTAAA---------------------GT--ATA
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20588539 25 -  62548349 ---------------------------------------A-A---AAT--------------A-GTGCTTCAAAT-TTAAG---------------------TT--A--
i Loxodonta_africana.GL010040.1                         I 13 I 5
s Lycaon_pictus.CM007556.1                               11084411 33 +  39895028 -----------------TT----CAA-T-----------A-A---AAT--------------T-GTGCTTTGACT-TCAAG---------------------Gt--ata
i Lycaon_pictus.CM007556.1                              C 0 I 58
s Macaca_arctoides.k141_2201161                             16556 41 +     74745 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TCAAG---------------------GT--ATA
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12703062 41 +  12821369 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TCAAG---------------------GT--ATA
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               5158 41 +      6569 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TCAAG---------------------GT--ATA
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           43460 41 +     63263 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TCAAG---------------------GT--ATA
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_1068107                               12036 41 +     12679 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TCAAG---------------------GT--ATA
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                1609 41 +      3017 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TCAAG---------------------GT--ATA
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  43221 41 -     79256 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TCAAG---------------------GT--ATA
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196032139 41 + 196197964 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TCAAG---------------------GT--ATA
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11442245 41 +  11645122 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TCAAG---------------------GT--ATA
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   2168 41 -     46448 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TCAAG---------------------GT--ATA
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                1999 41 -      3617 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TCAAG---------------------GT--ATA
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 12331 41 -     55006 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TCAAG---------------------GT--ACA
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43837368 41 +  43892939 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TCAAG---------------------GT--ATA
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                4590 41 -      5978 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TCAAG---------------------GT--ATA
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               2173 41 -     27140 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TCAAG---------------------GT--ATA
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                699324 17 +    802869 -------------------------------------------------------------------CTT-AAAT-TCAAC---------------------AT--ATA
i Macroglossus_sobrinus.MacSob_scaffold_879             N 0 I 67
s Mandrillus_leucophaeus.scaffold125                     43434029 41 -  43563597 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TCAAG---------------------GT--ATA
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4446855 41 -   4543643 CAAGTG----CC-----TT----GTA-T-----------A-A---AAA--------------G-GCACTTTGGAT-TCAAG---------------------GT--ATA
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            143787 41 +    252755 CAGGTG----CT-----TT----GAA-T-----------A-A---AAT------T-------T-GTACTTCAAA--TCAAG---------------------GT--AAA
i Manis_javanica.JSZB01003966.1                         C 0 I 18
s Manis_pentadactyla.KN017078.1                             33861 41 +     58827 CAGGTG----CT-----Tt----gaa-t-----------a-a---aat-------------tt-ctatttcaaa--tCAAG---------------------GT--ATT
i Manis_pentadactyla.KN017078.1                         C 0 I 18
s Marmota_marmota.CZRN01000005.1                         36871115 41 +  64221397 CATGTG----ct-----tt----aaa-t-----------g-a---aat--------------t-aatcttCAAAT-TCAAG---------------------GT--ATA
i Marmota_marmota.CZRN01000005.1                        C 0 I 53
s Megaderma_lyra.MegLyr_scaffold_3562                       61946 41 -    234502 CTTGTG----TC-----TT----GAA-T-----------A-A---AAC--------------A-GTGCTTCAAAT-TCAAG---------------------GT--ATA
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 I 33
s Mellivora_capensis.MelCap_flattened_line_1828            226327 33 -    226874 -----------------CT----CAA-T-----------A-A---AAT--------------T-GTGCTTTGAAT-TCAAG---------------------GT--ATC
i Mellivora_capensis.MelCap_flattened_line_1828         C 0 I 59
s Meriones_unguiculatus.MerUng_scaffold_52233                9247 40 +     15977 CATGTG----CT-----TT----GAA-T-----------A-A---ATT--------------C-ATGTGTCAAAT-T-AAA---------------------CT--ATA
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 I 48
s Mesocricetus_auratus.KB708139.1                         1044027 40 -  26018355 TGTATG----CT-----TT----GAA-T-----------A-A---AAT--------------C-ACGATTCAAAT-C-CAA---------------------CT--ATA
i Mesocricetus_auratus.KB708139.1                       C 0 I 34
s Mesoplodon_bidens.MesBid_scaffold_183284                   1376 41 +      2166 CATGTG----CC-----TT----GAA-T-----------A-A---AAT--------------G-CTGCTTAAAAT-TCAAG---------------------GT--ATA
i Mesoplodon_bidens.MesBid_scaffold_183284              C 0 C 0
s Microcebus_murinus.CM007691.1                          16507390 41 +  47401472 CATGTG----CC-----TT----GAA-T-----------A-A---AAT--------------G-GTACTTAGAAT-TCAAG---------------------GT--ATA
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  28693 39 -     48017 CACATA----CT-----TT----GAA-G-----------A-A---A----------------G-GTGCATCATAT-TCAAT---------------------GT--ATA
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               20345 41 -     32043 CATGTG----TG-----TT----AAG-T-----------A-A---AAT--------------G-GTGCTTCAAAT-TCAAG---------------------GT--ATA
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22817143 40 -  98408828 CATGTG----CT-----TT----GAA-T-----------G-A---AAT--------------C-ATGCTTCAGAT-T-AAA---------------------CT--ATA
i Microtus_ochrogaster.CM001673.1                       I 8 I 35
s Miniopterus_natalensis.LDJU01000022.1                   8207118 41 +  10048721 catgtg----cc-----tT----TAA-T-----------A-A---AAT--------------G-GTGCTTCAAAT-TCAAG---------------------GA--ATA
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            31789 41 +     45743 CATGTG----CC-----TT----TAA-T-----------A-A---AAT--------------G-GTGCTTCAAAT-TCAAG---------------------GA--ATA
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        32688 41 +     34273 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TCAAG---------------------GT--ATA
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         8357 33 -    104932 -----------------TT----CAA-T-----------A-A---AAT--------------T-ATGCTTTGAAT-TCGAG---------------------AT--ATA
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 I 58
s Mirza_zaza.k141_226143                                     2795 41 +      8497 CATGTG----CC-----TT----GAA-T-----------A-A---AAT--------------G-GTACTTAGAAT-TCAAG---------------------GT--ATA
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 144103 41 +    154973 CATGTG----CC-----TT----GAA-T-----------A-A---AAT--------------G-CTGCTTAAAAT-TCAAG---------------------GT--ATA
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                158883 41 +    265003 CATGTG----TG-----TT----AAG-T-----------A-A---AGT--------------G-GTGCCTCAAAT-TCAAG---------------------AT--ATA
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 I 50
s Moschus_moschiferus.MosMos_scaffold_146101                 2281 41 -      4346 CATGTG----CC-----TT----GAA-T-----------A-C---AAT--------------G-GTGCTTAAAAT-TCAAG---------------------GT--ATA
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  141979 33 -    168139 -----------------TT----GAA-T-----------A-A---AAT--------------T-ATGCTTTGAAT-TCAAG---------------------GT--ATA
i Mungos_mungo.MunMun_flattened_line_8729               C 0 I 58
s Murina_feae.MurFea_scaffold_2254                          16768 41 -    100666 CATGCA----TC-----TT----AAA-T-----------A-A---AAT--------------A-GTACCTCAAAT-TCAAG---------------------TC--ATA
i Murina_feae.MurFea_scaffold_2254                      C 0 I 31
s Mus_caroli.LT608236.1                                  70763632 40 +  92629107 CACGTG----TT-----TT----GAA-T-----------A-A---CAT--------------A-ATGGTTcaaat-t-aaa---------------------gt--ata
i Mus_caroli.LT608236.1                                 C 0 I 38
s Mus_musculus.chr16                                     75486694 40 +  98207768 catgtg----tt-----tt----gaa-t-----------a-A---CAT--------------A-ATGCTTCAAAT-T-AAA---------------------GT--ATA
i Mus_musculus.chr16                                    C 0 I 38
s Mus_pahari.LT608305.1                                  67552856 40 +  89017189 CACATG----TT-----TT----GAA-T-----------A-A---CAT--------------C-ATGCTTCAAAT-T-AAA---------------------GT--ATA
i Mus_pahari.LT608305.1                                 C 0 I 38
s Mus_spretus.CM004110.1                                 74327869 40 +  97876770 CACGTG----CT-----TT----GAA-T-----------A-A---CAT--------------A-ATGCTTCAAAT-T-AAa---------------------gt--ata
i Mus_spretus.CM004110.1                                C 0 I 38
s Muscardinus_avellanarius.MusAve_scaffold_9643              8401 41 +     98495 CGTGCA----CT-----TT----GAA-T-----------A-A---AAT--------------G-GTGCTTTAAAT-GCAAG---------------------GT--ATA
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 I 56
s Mustela_putorius.JH417978.1                             4421219 33 -  28371801 -----------------CT----CAA-T-----------A-A---AAT--------------T-GTGCTTTGAAT-TCAAG---------------------GT--ACA
i Mustela_putorius.JH417978.1                           C 0 I 59
s Myocastor_coypus.MyoCoy_scaffold_3653                     87364 19 -    117718 --------------------------------------------------------------------TTCCAATTTCTAG---------------------GTA-ATG
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 24 C 0
s Myotis_brandtii.KE161952.1                               965095 41 +   8389877 CCTGTG----CC-----TT----AAA-T-----------A-A---AAT--------------G-GTACCTCAAAT-TCAAG---------------------TT--ATA
i Myotis_brandtii.KE161952.1                            C 0 I 30
s Myotis_davidii.KB114863.1                               5016776 41 +   6462685 CATGTG----CC-----TT----AAA-T-----------A-A---AAT--------------G-GTACCTCAAAT-TCAAG---------------------TT--ATA
i Myotis_davidii.KB114863.1                             C 0 I 30
s Myotis_lucifugus.GL429887.1                             3462681 41 -   3747815 CATGTG----CC-----TT----AAA-T-----------A-A---AAT--------------G-GTACCTCAAAT-TCAAG---------------------TT--ATA
i Myotis_lucifugus.GL429887.1                           C 0 I 30
s Myotis_myotis.MyoMyo_scaffold_6123                         7869 41 +     66751 CATGTG----CC-----TT----AAA-T-----------A-A---AAT--------------G-GTACCTCAAAT-TCAAG---------------------TT--ATA
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 I 30
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             2757 25 -      8794 ---------------------------------------------AAT--------------G-CTGCTTCGAGT-TCAGA---------------------AT--ATA
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        I 15 C 0
s Nannospalax_galili.KL204535.1                           2057116 40 +   2354432 GATGTG----CA-----TT----GAA-T-----------A-A---ATT--------------A-GTGTATCAAAT-T-AAA---------------------TT--ATA
i Nannospalax_galili.KL204535.1                         C 0 n 0
s Nasalis_larvatus.k141_153429                               5067 41 +     48152 CAAGTG----CC-----TT----CTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TTAAG---------------------GT--ATA
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4481957 33 -  14209539 -----------------TT----CAA-T-----------A-A---AAT--------------T-ATGCTTTGAAT-TCGAG---------------------AT--ATA
i Neomonachus_schauinslandi.NINY01007774.1              C 0 I 58
s Neophocaena_asiaeorientalis.KZ688543.1                  3948714 41 -   4490290 CATGTG----CC-----TT----GAA-T-----------A-A---AAT--------------G-CTGCTTAAAAT-TCAAG---------------------GT--ATA
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  46996 41 +     94413 CATATG----TG-----TT----AAG-T-----------A-A---AAT--------------G-ATGCTTCAAAT-TCAAG---------------------GT--ATA
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1223136                          10860 41 -     11253 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGAAT-TCAAG---------------------GT--ATA
i Nomascus_annamensis.k141_1223136                      C 0 C 0
s Nomascus_concolor.k141_49591                                162 41 +      2014 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGAAT-TCAAG---------------------GT--ATA
i Nomascus_concolor.k141_49591                          C 0 C 0
s Nomascus_gabriellae.k141_906566                            1492 41 -      2544 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGAAT-TCAAG---------------------GT--ATA
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             21966 41 -  18771707 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGAAT-TCAAG---------------------GT--ATA
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_844529                                  1241 41 +      2124 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGAAT-TCAAG---------------------GT--ATA
i Nomascus_siki_a.k141_844529                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                27404 33 +   3668941 -----------------TT----CAA-T-----------A-A---AAT--------------T-GTGCTTTGAAT-TCAAG---------------------Gt--ata
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 I 58
s Nycticebus_bengalensis.LG16                            65564243 55 -  95554990 CACGAG----CC-----TT----GAA-T-----------A-A---AATAAGAACTTTGAATAA-GTACTTTGAAT-TTAAG---------------------GT--ATA
i Nycticebus_bengalensis.LG16                           C 0 I 54
s Nycticebus_coucang.k141_2051882                            1088 55 +      6470 CACGAG----CC-----TT----GAA-T-----------A-A---AATAAGAACTTTGAATAA-GTACTTTGAAT-TTAAG---------------------GT--ATA
i Nycticebus_coucang.k141_2051882                       C 0 I 54
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65666612 55 +  89412551 CACGAG----CC-----TT----GAA-T-----------A-A---AATAAGAACTTTGAATAA-GTACTTTGAAT-TTAAG---------------------GT--ATA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4993233 40 -  23139505 Catgt-----tt-----tt----gaa-t-----------a-a---aat--------------g-atacTTCCAGG-TCAAG---------------------AT--AAA
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3680613 19 +  10294119 catgt--gca-g-----ct----gag-a-----------a-a---aa--------------------------------------------------------------
i Octodon_degus.JH651621.1                              C 0 I 1579
s Odobenus_rosmarus.KB229369.1                             676610 33 -   3126709 -----------------TT----CAA-T-----------A-A---AAT--------------T-GTGCTTTGAAT-TCAAG---------------------AT--ata
i Odobenus_rosmarus.KB229369.1                          C 0 I 58
s Odocoileus_virginianus.KZ101650.1                       1077406 41 +   1425656 CATGTG----CC-----TT----GAA-T-----------A-A---AAT--------------G-GTGCTTAAAAT-TCAAG---------------------GT--ATA
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         34566 41 +     78940 tatgtg----CC-----TT----GAA-T-----------A-A---AAT--------------G-TTGCTTAAAAT-TCAAG---------------------GT--ATA
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  122422 40 +    145789 CATGTG----CT-----CT----GAA-T-----------G-A---AAT--------------C-ATGCTTCAAAT-T-AAA---------------------CT--AAA
i Ondatra_zibethicus.OndZib_scaffold_6821               I 8 I 40
s Onychomys_torridus.OnyTor_scaffold_12578                  34174 40 +     62360 CGTGTG----CT-----CT----GAA-T-----------A-A---AAT--------------C-ATGCTTCAAGT-T-AAA---------------------CT--ATA
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 I 33
s Orcinus_orca.KB316965.1                                 7222401 41 -   7562323 CATGTG----CC-----TT----GAA-T-----------A-A---AAT--------------G-CTGCTTAAAAT-TCAAG---------------------GT--ATA
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              40776 44 -     66828 CATGTA----CT-----TT----GAA-G-----------A-AAAAAAA--------------A-GTGCTTCAAAT-TGAAA---------------------GC--ATA
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141872908 40 + 163896628 CATAC-----TT-----AT----GAA-T-----------A-A---AAT--------------G-GTGCTTCAAAG-TCAAG---------------------AT--ATA
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      304743 33 -    505867 -----------------TT----CAA-T-----------A-A---AAT--------------T-GTGCTTTGAAT-TCAAG---------------------Gt--ata
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 I 58
s Otolemur_crassicaudatus.k141_321880                       36255 41 +     38679 CATGAG----TT-----TT----GAA-T-----------A-A---AAT--------------G-GTACTCGGAAT-TTAAG---------------------GC--ATA
i Otolemur_crassicaudatus.k141_321880                   C 0 I 58
s Otolemur_garnettii.GL873528.1                          18005696 41 -  38779656 CATGAG----TT-----TT----GAA-T-----------A-A---AAT--------------G-GTACTTGGAAT-TTAAG---------------------GC--ATA
i Otolemur_garnettii.GL873528.1                         C 0 I 58
s Ovis_aries.CM001582.2                                 134074988 39 - 275406953 CATGTG----CC-----TT----GAA-T-----------A-A---AAT--------------G-GTGCTTAAAAT-TCAAG---------------------GT----A
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      76202 39 +    140051 CATGTG----CC-----TT----GAA-T-----------A-A---AAT--------------G-GTGCTTAAAAT-TCAAG---------------------GT----A
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127571719 41 - 205426864 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCTTTTCGAAT-TCAAG---------------------GT--ATA
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120148872 41 - 196562556 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCTTTTCGAAT-TCAAG---------------------GT--ATA
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  31438 33 +    295523 -----------------TT----GAA-T-----------A-A---AAT--------------T-GTGCTGTGAAC-TCAAG---------------------GT--ATA
i Panthera_onca.PanOnc_flattened_line_1615              C 0 I 58
s Panthera_pardus.KV860323.1                              3635039 33 +  18214204 -----------------tt----gaa-t-----------a-a---aat--------------t-gtgCTGTGAAC-TCAAG---------------------GT--ATA
i Panthera_pardus.KV860323.1                            C 0 I 58
s Panthera_tigris.KE721879.1                              5024820 33 -   6340057 -----------------tt----gaa-t-----------a-a---aat--------------t-gtgCTGTGAAC-TCAAG---------------------GT--ATA
i Panthera_tigris.KE721879.1                            C 0 I 58
s Pantholops_hodgsonii.KE114631.1                         1063849 39 -   1292953 CATGTG----CC-----TT----GAA-T-----------A-A---AAT--------------G-GTGCTTAAAAT-TCAAG---------------------GT----A
i Pantholops_hodgsonii.KE114631.1                       C 0 I 10
s Papio_anubis.CM001492.2                               188152813 41 - 188283584 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TCAAG---------------------GT--ATA
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            49025 41 +     76494 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TCAAG---------------------GT--ATA
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47510210 41 +  47705337 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TCAAG---------------------GT--ATA
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 64192 41 -    104429 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TCAAG---------------------GT--ATA
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  13978 41 -     29451 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TCAAG---------------------GT--ATA
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                34381 41 +     35859 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TCAAG---------------------GT--ATA
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    112755 33 -    135482 -----------------TT----GAA-T-----------A-A---AAT--------------T-GTGCCTTGAAT-TCAAG---------------------GT--ATA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           2301 41 -     23713 CATGAG----CC-----TT----GAA-T-----------A-A---AAT--------------G-GTACTTTGAAT-TTTAG---------------------GT--AGA
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            21599 41 -     27972 CATGAG----CC-----TT----GAA-T-----------A-A---AAT--------------G-GTACTTTGAAT-TTTAG---------------------GT--ATA
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      40203 40 -     45160 CATGTA----CT-----TG----CAA-T-----------A-C---AGG--------------G--AGCTTCACCA-TCCAT---------------------GT--GTA
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4947349 40 -   8017169 CATGTG----CT-----TT----GAA-T-----------A-A---AAT--------------C-ATGCTTCAAGT-T-AAA---------------------CT--ATA
i Peromyscus_maniculatus.KI615518.1                     C 0 I 33
s Petromus_typicus.PetTyp_scaffold_33007                     9530 18 -     36578 --------------------------------------------------------------------GTCACAT-TCTAG---------------------GT-GATA
i Petromus_typicus.PetTyp_scaffold_33007                I 24 I 34
s Phocoena_phocoena.PhoPho_flattened_line_11948            119016 41 -    122454 CATGTG----CC-----TT----GAA-T-----------A-A---AAT--------------G-CTGCTTAAAAT-TCAAG---------------------GT--ATA
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           2071 41 -      3310 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TCAAG---------------------GT--ATA
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       21977 41 -     82327 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TCAAG---------------------GT--ATA
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           18729 41 +     19957 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TCAAG---------------------GT--ATA
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26736738 41 +  26888534 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TCAAG---------------------GT--ATA
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            93866 42 +    112873 CATGTG----CC-----TT----AAA-T-----------A-AA--AAT--------------T-GTACCTCAAAT-TCAAG---------------------TT--ATA
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 I 71
s Pithecia_albicans.k141_991845                             40719 41 -     61926 CAAATG----CT-----TT----GTA-T-----------A-A---AAT--------------G-GTGCTTCGAAC-CCCAA---------------------GT--ATA
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        22148 41 +     78826 CAAAAG----CT-----TT----GTA-T-----------A-A---AAT--------------G-GCGCTTCGAAC-CCCAA---------------------GT--ATA
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              6099 41 -     15800 CAAATG----CT-----TT----GTA-T-----------A-A---AAT--------------G-GCGCTTCGAAC-CCCAA---------------------GT--ATA
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                         9297 41 -     16101 CAAATG----CT-----TT----GTA-T-----------A-A---AAT--------------G-GCGCTTCGAAC-CCCAA---------------------GT--ATA
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          2606 41 +      9673 CAAATG----CT-----TT----GTA-T-----------A-A---AAT--------------G-GCGCTTCGAAC-CCCAA---------------------GT--ATA
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13471600 41 -  19735023 CAAATG----CT-----TT----GTA-T-----------A-A---AAT--------------G-GCGCTTCGAAC-CCCAA---------------------GT--ATA
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           10508 41 -     31692 CAAATG----CT-----TT----GTA-T-----------A-A---AAT--------------G-GCGCTTCGAAC-CCCAA---------------------GT--ATA
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           3086 41 +     21690 CATGTG----CC-----TT----GAA-T-----------A-A---AAT--------------G-CTGCTTAAAAT-TCAAG---------------------GT--ATA
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       19945 41 +     44506 CAAATG----CT-----TT----GTA-T-----------A-A---AAT--------------G-GTGCTTCAAAC-CCCAA---------------------GT--ATA
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        20155 41 +     67491 CAAATG----CT-----TT----GTA-T-----------A-A---AAT--------------G-GTGCTTCAAAC-CCCAA---------------------GT--ATA
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      10400 41 -     98129 CAAATG----CT-----TT----GTA-T-----------A-A---AAT--------------G-GTGCTTCAAAC-CCCAA---------------------GT--ATA
i Plecturocebus_caligatus.k141_2539816                  C 0 I 48
s Plecturocebus_cinerascens.k141_744510                     20001 41 +    147771 CAAATG----CT-----TT----GTA-T-----------A-A---AAT--------------G-GTGCTTCAAAC-CCCAA---------------------GT--ATA
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        20251 41 -     23762 CAAATG----CT-----TT----GTA-T-----------A-A---AAT--------------G-GTGCTTCAAAC-CCCAA---------------------GT--ATA
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                           717 41 -     55515 CAAATG----CT-----TT----GTA-T-----------A-A---AAT--------------G-GTGCTTCAAAC-CCCAA---------------------GT--ATA
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         20070 41 +    152463 CAAATG----CT-----TT----GTA-T-----------A-A---AAT--------------G-GTGCTTCAAAC-CTCAA---------------------GT--ATA
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      6830 41 +      8943 CAAATG----CT-----TT----GTA-T-----------A-A---AAT--------------G-GTGCTTCAAAC-CCCAA---------------------GT--ATA
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                          9790 41 +    134592 CAAATG----CT-----TT----GTA-T-----------A-A---AAT--------------G-GTGCTTCAAAC-CCCAA---------------------GT--ATA
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          20380 41 -     75465 CAAATG----CT-----TT----GTA-T-----------A-A---AAT--------------G-GTGCTTCAAAC-CCCAA---------------------GT--ATA
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              184263 41 -    373494 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTCGAAT-TCAAG---------------------GT--ATA
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19804170 41 +  19899266 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTCGAAT-TCAAG---------------------GT--ATA
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               2309 41 -     15069 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TTAAG---------------------GT--ATA
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              2443 41 +     14865 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TTAAG---------------------GT--ATA
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                73609 42 +     78963 TATGCA----CT-----TT----GAA-A-----------A-A---AAT--------------GGGTGCTTCATAT-TTAAG---------------------AC--ATA
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 I 6
s Prolemur_simus.MPIZ01000048.1                           6845646 41 +  12164890 CATGTG----CC-----TT----GAA-T-----------A-A---AAT--------------T-GTACTTATAAT-TCAAG---------------------GT--ATA
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    664263 41 -   2312742 NNNNNN----NN-----NN----NNN-N-----------N-N---NNN--------------N-NNNNNNNNNNN-NNNNN---------------------NN--NNN
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                          791 41 +     11805 CATGTG----CC-----TT----GAA-T-----------A-A---AAT--------------G-GTACTTAAAAT-TCAAG---------------------GT--ATA
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           40127 41 +     52369 CATGTG----CC-----TT----GAA-T-----------A-A---AAT--------------G-GTACTTAAAAT-TCAAG---------------------GT--ATA
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         32515 41 -     44753 CATGTG----CC-----TT----GAA-T-----------A-A---AAT--------------G-GTACTTAAAAT-TCAAG---------------------GT--ATA
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            14436 41 +     27322 CATGTG----CC-----TT----GAA-T-----------A-A---AAT--------------G-GTACTTAAAAT-TCAAG---------------------GT--ATA
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       14075 41 -     53241 CATGTG----CC-----TT----GAA-T-----------A-A---AAT--------------G-GTACTTAAAAT-TCAAG---------------------GT--ATA
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         36347 41 -     48185 CATGTG----CC-----TT----GAA-T-----------A-A---AAT--------------G-GTACTTAAAAT-TCAAG---------------------GT--ATA
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           30785 40 +     77221 CATGTG----CT-----TT----GAA-T-----------A-A---ATT--------------C-ATGcgtcaaat-t-aaa---------------------at--ata
i Psammomys_obesus.NESX01026517.1                       C 0 I 50
s Pteronotus_parnellii.KE867983.1                            1568 18 -     27784 -------------------------------------------------------------------CTTCAAAT-TCAAG---------------------GT--ATA
i Pteronotus_parnellii.KE867983.1                       I 20 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        243312 33 -    344369 -----------------CT----CAA-T-----------A-A---AAT--------------T-GTGCTTTGAAT-TCAAG---------------------GT--ATA
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 I 59
s Pteropus_alecto.KB031157.1                             13243683 28 -  17261082 -------------------------A-T-----------A-A---AAT--------------G-GTCCTT-CAAT-TCAAC---------------------AT--GTA
i Pteropus_alecto.KB031157.1                            I 113 I 67
s Pteropus_vampyrus.KN525959.1                             601636 28 -   3946241 -------------------------A-T-----------A-A---AAT--------------G-GTCCTT-CAAT-TCAAC---------------------AT--GTA
i Pteropus_vampyrus.KN525959.1                          I 113 I 67
s Puma_concolor.QAVW01000427.1                          131531402 33 - 161321710 -----------------tt----gaa-t-----------a-a---aat--------------t-gtgCTGTGAAC-TCAAG---------------------GT--ATa
i Puma_concolor.QAVW01000427.1                          C 0 I 58
s Pygathrix_cinerea.k141_374971                             26434 41 +     56732 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TTAAG---------------------GT--ATA
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6802925 41 +   6970761 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TTAAG---------------------GT--ATA
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             2318 41 +     18040 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TTAAG---------------------GT--ATA
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                13490 41 +     68503 CATGTG----CC-----TT----GAA-T-----------A-A---AAT--------------G-GTGCTTAAAAT-TCAAG---------------------GT--ATA
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13912763 40 +  90463843 CCTGTG----CT-----TT----GAA-T-----------A-A---CAT--------------C-GTACTTCTTAT-T-AAA---------------------CT--GTA
i Rattus_norvegicus.chr11                               C 0 I 43
s Rhinolophus_sinicus.LVEH01000179.1                      1785476 41 +   2252614 CATATG----CC-----TT----GAA-T-----------A-A---AAT--------------A-GTGTCTCAAAT-TCAAG---------------------Ga--att
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           12871 41 -     14454 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TTAAG---------------------GT--ATA
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206374197 41 - 206558726 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TTAAG---------------------GT--ATA
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44851845 41 -  45163003 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TTAAG---------------------GT--ATA
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                16993 20 +    109198 ----------------------------------------------------------------GTCCTT-CAAT-TCAAC---------------------AT--GTA
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            I 121 I 67
s Saiga_tatarica.SaiTat_scaffold_82192                       5294 41 +     12214 CATGTG----CC-----TT----GAA-T-----------A-A---AAT--------------G-GTGCTTAAAAT-TCAAG---------------------GTAT--A
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15669833 41 -  43202129 tgaatg----ct-----tt----gta-T-----------A-A---AAT--------------G-GCGCTTCAAAT-TCCAG---------------------GT--ATA
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        1696 45 +     34089 TGAATG----CT-----TTCTTTGTA-T-----------A-A---AAT--------------G-GCGCTTCAAAT-TCCAG---------------------GT--ATA
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              1637 45 -     60842 TGAATG----CT-----TTCTTTGTA-T-----------A-A---AAT--------------G-GCGCTTCAAAT-TCCAG---------------------GT--ATA
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              1732 45 +     67014 TGAATGCTTTCT-----TT----GTA-T-----------A-A---AAT--------------G-GCGCTTCAAAT-TCCAG---------------------GT--ATA
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              1710 45 +     60816 TGAATG----CT-----TTCTTTGTA-T-----------A-A---AAT--------------G-GCGCTTCAAAT-TCCAG---------------------GT--ATA
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 1651 41 -     76454 TGAATG----CT-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTCAAAT-TCCAG---------------------GT--ATA
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17338162 41 -  30362882 CAAATG----CT-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTCAAAT-TCCAG---------------------GT--ATG
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         17761 41 -     62485 CAAATG----CT-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTCAAAT-TCCAG---------------------GT--ATG
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   29049 41 -    114521 TATGTG----CT-----GT----GAA-T-----------A-A---AAT--------------G-GCATTCCAACT-TCAAG---------------------CC--ATA
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1527475                       24859 41 +     26421 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTCGAT-TTAAG---------------------GT--ATA
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       5319 41 +     20762 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TTAAG---------------------GT--ATA
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         39054 41 +     40653 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TTAAG---------------------GT--ATA
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                            9611 41 -     12194 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TTAAG---------------------GT--ATA
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     23033 41 -     27512 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTCGAT-TTAAG---------------------GT--ATA
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         32052 41 -     33692 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TTAAG---------------------GT--ATA
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   96969 40 -    120886 TGTGTG----CT-----TT----GAA-T-----------A-A---AAT--------------C-ATGCTTCAAAT-T-AAA---------------------CT--AAA
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 I 34
s Solenodon_paradoxus.SolPar_flattened_line_1012            15692 41 +    739146 CAAGTG----TT-----TT----GAA-T-----------A-T---AAA--------------G-GTACTTTAAAT-TCAAG---------------------AT--ATA
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17747900 41 -  27805282 TATGTG----TT-----TT----TGT-T-----------C-C---AAT--------------A-ATGCTTCTAAT-ACAAG---------------------GT--ATA
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2237191 41 +   2842873 CATGTG----CT-----TT----AAA-T-----------A-A---AAT--------------G-GTGCTTCAAAT-TCAAG---------------------GT--ATA
i Spermophilus_dauricus.KZ294190.1                      C 0 I 53
s Spilogale_gracilis.SpiGra_flattened_line_905             232080 33 -    276980 -----------------CT----TAA-T-----------A-A---AAT--------------T-GTGCTTTGAAT-TCAAG---------------------GT--ATA
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 I 58
s Suricata_suricatta.SurSur_flattened_line_20339            24643 33 +     62062 -----------------TT----GAA-T-----------A-A---AAT--------------T-ATGCTTTGAAT-TCAAG---------------------GT--ATA
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 I 58
s Sus_scrofa.CM000824.4                                 189269548 41 + 218635234 CATGTA----CC-----TT----GAA-T-----------A-A---AAT--------------G-GTGTTTAAAAT-TCAAG---------------------GT--ATA
i Sus_scrofa.CM000824.4                                 C 0 I 53
s Symphalangus_syndactylus.tarseq_24                     13899025 41 +  13920577 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGAAT-TCAAG---------------------GT--ATA
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_148405               3311 41 -      6063 CATGTG----CC-----CT----AAA-T-----------A-A---AAT--------------G-GTGTTTCAAAT-TCAAG---------------------GT--ATA
i Tadarida_brasiliensis.TadBra_scaffold_148405          I 561 I 198
s Tamandua_tetradactyla.TamTet_scaffold_26877               12428 25 +     45698 ---------------------------------------------AAT--------------G-CTGCTTCGAGT-TCAGA---------------------AT--ATA
i Tamandua_tetradactyla.TamTet_scaffold_26877           I 15 C 0
s Tapirus_indicus.TapInd_scaffold_176                      804415 41 +   1148477 CATGTG----CT-----TT----GAA-T-----------A-A---AAT--------------T-GTGCTTCAAAT-TCAAG---------------------GT--ATA
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  55076 41 +     99546 CATGTG----CT-----TT----GAA-T-----------A-A---AAT--------------T-GTGCTTCAAAT-TCAAG---------------------GT--ATA
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               23738 46 +     42269 CATGTG----CAGTACATT----GAA-T-----------A-A---AAT--------------G-GTGCTTCTGAT-TCATG---------------------GT--ATA
i Tarsius_lariang.k141_609102                           C 0 I 23
s Tarsius_wallacei.k141_48636                               57054 46 +     65473 CATGTG----CAGTACATT----GAA-T-----------A-A---AAT--------------G-GTGCTTCTGAT-TCATG---------------------GT--ATA
i Tarsius_wallacei.k141_48636                           C 0 I 23
s Theropithecus_gelada.CM009951.1                       194004349 41 - 194193292 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGGT-TCAAG---------------------GT--ATA
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             36595 18 -     47444 CATGTG----CT-----TT----GAA-G-----------C-A---AA--------------------------------------------------------------
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 I 29
s Tolypeutes_matacus.TolMat_scaffold_269431                  1311 25 +      6782 ---------------------------------------------AAT--------------G-ATGCTTCAAGT-TCAAG---------------------TT--ATA
i Tolypeutes_matacus.TolMat_scaffold_269431             I 15 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  133554 41 -    259118 CATGTG----TA-----TT----GAG-T-----------A-A---AAT--------------G-GTGCTTCAAAT-TCAAG---------------------GT--ATA
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        23429 41 +     38948 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TTAAG---------------------GT--ATA
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   17156 41 -     32910 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TTAAG---------------------GT--ATA
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       23054 41 +     24652 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TTAAG---------------------GT--ATA
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      1932 41 -      3559 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TTAAG---------------------GT--ATA
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           39878 41 -     54611 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TTAAG---------------------GT--ATA
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       15876 41 +     17312 CAAGTG----TC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TTAAG---------------------GT--ATA
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    23240 41 -     25040 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TTAAG---------------------GT--ATA
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          1906 41 +      3528 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TTAAG---------------------GT--ATA
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  48268 41 +     51589 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TTAAG---------------------GT--ATA
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       11444 41 +     14732 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TTAAG---------------------GT--ATA
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       1921 41 -     28054 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TTAAG---------------------GT--ATA
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44656716 41 -  44834318 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TTAAG---------------------GT--ATA
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        1726 41 +      3372 CAAGTG----CC-----TT----GTA-T-----------A-A---AAT--------------G-GCACTTTGGAT-TTAAG---------------------GT--ATA
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   2891 41 +     90398 CATGTG----GC-----TT----TAA-T-----------A-A---AAT--------------G-GTGCTTATAAT-TCAAG---------------------GC--ATA
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 I 66
s Trichechus_manatus.JH594618.1                          16079001 41 +  31416278 CACATG----TT-----TT----GGA-A-----------A-A---AAT--------------G-GTGCTTCAAAT-TTAAG---------------------GT--ATA
i Trichechus_manatus.JH594618.1                         C 0 I 6
s Tupaia_chinensis.KB320831.1                             2789125 42 -   3938065 CATGTG----CT-----TT----GAA-T-----------ATA---AAT--------------G-GTGCTTAAAAA-TCAaa---------------------gt--ata
i Tupaia_chinensis.KB320831.1                           C 0 I 330
s Tupaia_tana.TupTan_flattened_line_68454                    1633 42 +     13056 CATATG----CT-----TT----GAA-T-----------ATA---AAT--------------G-GTGCTTAAAAA-TCAAA---------------------GT--ATA
i Tupaia_tana.TupTan_flattened_line_68454               C 0 I 338
s Tursiops_truncatus.MRVK01000923.1                      69311119 41 -  96451834 CATGTG----CC-----TT----GAA-T-----------A-A---AAT--------------G-CTGCTTAAAAT-TCAAG---------------------GT--ATA
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 24237 41 -     25548 TAAATG----CT-----GT----GAA-T-----------A-A---AAT--------------G-ACACTCCAACT-CCAAG---------------------TC--ATA
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6511872 33 +  28682327 -----------------TT----CAA-T-----------A-A---AAT--------------T-GTGCTTTGAAT-TCAAG---------------------Gt--ata
i Ursus_maritimus.KK498671.1                            C 0 I 58
s Varecia_rubra.k141_432109                                  2485 41 -     20643 CATGTG----CA-----TT----GAA-T-----------A-A---AAT--------------T-GTACTTATAAT-TCAAG---------------------GT--ATA
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             22029 41 -     33872 CATGTG----CA-----TT----GAA-T-----------A-A---AAT--------------T-GTACTTATAAT-TCAAG---------------------GT--ATA
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1522349 41 -   2331223 catgtg----cc-----tT----GAA-T-----------A-A---ACT--------------G-CTGCTTAAAAT-TCAAG---------------------GT--ATA
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                134811 33 -    281493 -----------------TT----CAA-T-----------A-A---AAT--------------T-GTGCTTTGAAT-TCAAG---------------------GT--ATA
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 I 58
s Xerus_inauris.XerIna_scaffold_7898                       124292 41 -    134049 TATGTG----CT-----TT----GAA-T-----------A-A---AAT--------------G-GTGCTTCAAAT-TCTAG---------------------GT--ATA
i Xerus_inauris.XerIna_scaffold_7898                    C 0 I 53
s Zalophus_californianus.ZalCal_flattened_line_4097        211339 33 -    227762 -----------------TT----CAA-T-----------A-A---AAT--------------T-GTGCTTCGAAT-TCAAG---------------------AT--ATA
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 I 58
s Zapus_hudsonius.ZapHud_scaffold_64392                     12517 25 -     20485 CATGTG----CT-----TT----GAA-TTT-TTTTT---T-A---AA--------------------------------------------------------------
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 I 56
s Ziphius_cavirostris.ZipCav_flattened_line_127025           4618 41 -      8775 CATGTG----CC-----TT----GAA-T-----------A-A---AAT--------------G-CTGCTTAAAAT-TCAAG---------------------GT--ATA
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0

a score=0.000000
s hg38.chr4_GL000008v2_random                                9016 142 +    209709 AACTAC-AACA-A---A-ACA-C---TT-T-CGAGAT--CTAGT-T-TGAT--T-GA--AG-A----GT-GCATT-CTTAC-TTA-TT--TA-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------CAAGATAG-T-CCACAATTCTAAAGGAAA-ACCAA--AATA-GAA----TAATA-ATT----------ACAA-AACAA-AAT
s Acinonyx_jubatus.LLWD01000356.1                         2031153  78 +   3721120 -----------------------------------------------------------------------------------------------------------t----------t-ctctgcatT-TTCTGA----T-----T------------------CAATATAT-T-TCACAGTTCTAAAGGAGA-accaa--aata-gaa----taata-att----------acaa-aataa-aac
i Acinonyx_jubatus.LLWD01000356.1                       I 58 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    109734  84 -    189883 -------------------------------------------------------------------------TT-C---T-TCC-CT--TA-T--T--------TAT----------T-TTCTTCCTT-CTCTGA----C-----T------------------TAAGATAT-T-TTATAATTCTAAAGAAGA-AACAA--AACT-AAG----TAAAA-ATT----------ACA-----------
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 35 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10654477  78 +  23371972 -----------------------------------------------------------------------------------------------------------T----------T-CTCTGCATT-TTCTAA----T-----T------------------CAAGATAT-T-TCacaattcaaaaggaga-acgaa--aata-gaa----taata-att----------acaa-aacaa-aac
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 58 C 0
s Ailurus_fulgens.LNAC01000003.1                          7091199  78 -  16596857 -----------------------------------------------------------------------------------------------------------t----------t-ctctccatt-ttctgA----T-----T------------------CAAGATAT-T-TCACAATTCTGAAGGAGa-accaa--aata-gaa----taata-att----------acaa-aacaa-aac
i Ailurus_fulgens.LNAC01000003.1                        I 60 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   10147  95 -     22067 -------------------------------------------------------------------GT-GCACC-CTCAT-TCA-TT--CA-T--A--------TAT----------T-CTCTTTCTT-CTCTGA----T-----G------------------ATAGATAT-T-TTACCATTCAAAATAAGA-GCTAA--AATA-GAG----CAATA-ATT----------AC-A-AAC------
i Allactaga_bullata.AllBul_scaffold_70162               I 57 C 0
s Allenopithecus_nigroviridis.k141_3103707                  60030 142 +     61638 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GTATT-CCTAT-TCA-CT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AGC
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        51838 142 +     53391 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGAC--TTAGT-T-TGGT--T-GC--AG-A----GT-GTATT-CTTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-tcacaattctaaaggaaa-atcaa--aata-gga----taata-att----------acaa-aacaa-aac
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         2563 142 +     72529 AACTAC-AACA-C---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGGT--T-GC--AG-A----GC-GTATT-CTTAT-TCA-TT--TG-T--C--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          2138 142 +      3797 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGAC--TTAGT-T-TGGT--T-GC--AG-A----GT-GTATT-CTTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-tcacaattctaaaggaaa-atcaa--aata-gga----taata-att----------acaa-aacaa-aac
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             7379  81 -     18050 --------------------------------------------------------------------------------------TT--TA-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------CAAGATAT-T-TTACAATTCTAAAGGAGA-AACAA--AATA-GGA----TAATA-ATT----------ACAA-AA------C
i Alouatta_belzebul.k141_1818029                        I 52 C 0
s Alouatta_caraya.k141_5460                                  8490  81 -     11521 --------------------------------------------------------------------------------------TT--TA-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------CAAGATAT-T-TTACAATTCTAAAGGAGA-AACAA--AATA-GGA----TAATA-ATT----------ACAA-AA------C
i Alouatta_caraya.k141_5460                             I 52 C 0
s Alouatta_discolor.k141_811576                              8056  81 -     21359 --------------------------------------------------------------------------------------TT--TA-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------CAAGATAT-T-TTACAATTCTAAAGGAGA-AACAA--AATA-GGA----TAATA-ATT----------ACAA-AA------C
i Alouatta_discolor.k141_811576                         I 52 C 0
s Alouatta_juara.k141_1856473                                6433  81 +      7227 --------------------------------------------------------------------------------------TT--TA-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------CAAGATAT-T-TTACAATTCTAAAGGAGA-AACAA--AATA-GGA----TAATA-ATT----------ACAA-AA------C
i Alouatta_juara.k141_1856473                           I 52 C 0
s Alouatta_macconnelli.k141_1331706                          7347  81 -     10438 --------------------------------------------------------------------------------------TT--TA-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------CAAGATAT-T-TTACAATTCTAAAGGAGA-AACAA--AATA-GGA----TAATA-ATT----------ACAA-AA------C
i Alouatta_macconnelli.k141_1331706                     I 52 C 0
s Alouatta_nigerrima.k141_2718643                            4003  81 +      7047 --------------------------------------------------------------------------------------TT--TA-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------CAAGATAT-T-TTACAATTCTAAAGGAGA-AACAA--AATA-GGA----TAATA-ATT----------ACAA-AA------C
i Alouatta_nigerrima.k141_2718643                       I 52 C 0
s Alouatta_palliata.k141_1316127                             7289  81 +     10410 --------------------------------------------------------------------------------------TT--TA-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------CAAGATAT-T-TTACAATTCTAAAGGAGA-AACAA--AATA-GGA----TAATA-ATT----------ACAA-AA------C
i Alouatta_palliata.k141_1316127                        I 52 C 0
s Alouatta_puruensis.k141_1284840                            1092  81 -      4927 --------------------------------------------------------------------------------------TT--TA-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------CAAGATAT-T-TTACAATTCTAAAGGAGA-AACAA--AATA-GGA----TAATA-ATT----------ACAA-AA------C
i Alouatta_puruensis.k141_1284840                       I 52 C 0
s Alouatta_seniculus.k141_990213                             4020  81 +      6429 --------------------------------------------------------------------------------------TT--TA-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------CAAGATAT-T-TTACAATTCTAAAGGAGA-AACAA--AATA-GGA----TAATA-ATT----------ACAA-AA------C
i Alouatta_seniculus.k141_990213                        I 52 C 0
s Ammotragus_lervia.NIVO01013474.1                        3517856  84 +   4113121 ATCTAT-AACA-A---A-ACA-CTT-TT-T-CCAGAT--TCAGC-T-TAAT--A-GC--AG-G----AT-GCATT-TTCAC-TCA-TT--TA-T--A--------TAT----------G-CTCTGCATT-TCCTGT----T----------------------------------------------------------------------------------------------------------
i Ammotragus_lervia.NIVO01013474.1                      C 0 I 61
s Anoura_caudifer.AnoCau_scaffold_422                      388042 141 -    631301 ATCTAT-AACA-A---A-ACA-CTT-TT-T-CCAGAT--TCAGT-TTTTAT--G-GC--AG-G----AT-GCA---CTTGC-TCA-TT--TA-T--A--------TAT----------T-C--TGCATT-TTCTGA----T-----T------------------CAAGATAT-T-TAACAATTCTAAAGGAGA-ACCAA--AATA-GAA----TAATA-ATT----------ACAA-AATAA-AAC
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            28458 145 +     33004 ATCTAT-AACA-A---A-ACA-CTT-TT-T-CCAGAT--TCAGC-T-TTAT--G-GC--AG-G----AT-GTATT-TTCAC-TCA-TT--TA-T--A--------CAT----------T-CTCTGCATT-TCCTGA----T-----A------------------CAAGATCT-TTTCAAAATTCTAAAGGAGA-ACCAA--AATA-GAA----CAATA-ATT----------ACAA-AATAA-AAC
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 59686 142 +     78111 AACTAT-AACA-A---G-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GA-GCATT-CTTAC-TTA-TT--TA-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------CAAGATAT-T-TTACAATTCTAAAGGAGA-AACAC--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            2613 142 +     22701 AACTGT-AACA-A---G-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GA-GCATT-CTTAC-TTA-TT--TA-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------CAAGATAT-T-TTACAATTCTAAAGGAGA-AACAC--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5746571 142 +   9889416 AACTGT-AACA-A---G-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GA-GCAtt-cttac-tta-tt--ta-t--a--------tat----------t-ctctGCAAT-TTCTGA----T-----T------------------CAAGATAT-T-TTACAATTCTAAAGGAGA-AACAC--AATA-Gga----taata-att----------acaa-aacaa-aac
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             3156 142 -    104377 AACTAT-AACA-A---G-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GA-GCATT-CTTAC-TTA-TT--TA-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------CAAGATAT-T-TTACAATTCTAAAGGAGA-AACAC--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               3162 142 +     23246 AACTAT-AACA-A---G-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GA-GCATT-CTTAC-TTA-TT--TA-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------CAAGATAT-T-TTACAATTCTAAAGGAGA-AACAC--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     1242  76 +      5067 ------------------------------------------------------------------------------------------------A--------TAT----------G-CTCTTCAAT-CTCTGA----T-----T------------------CAAGACAT-T-TTACAATTCTAAAGGAGA-ACCAA--AATA-GAA----TAATA-ATT----------ATGA-AAC------
i Aplodontia_rufa.AprRuf_scaffold_156013                I 57 I 3
s Arctocebus_calabarensis.k141_1161114                      15146 143 +     17483 ATCTAT-AACA-A---A-ACA-T---TT-T-CCAGAT--CTAGC-T-TTAC--A-GC--AT-G----GT-GCATT-CTCAC-TCA-TT-TTT-T--T--------TAT----------T-GTTTACATT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAAGAGA-ACTGA--AATA-GAA----TAATA-ATT----------GCAA-AATAA-AAG
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 6428 141 -     29036 ATTTAT-AACA-A---A-ACA-CTT-TT-T-CCAGAT--TCAGT-TTTTAG--G-GC--AG-G----AT-GCA---CTGGC-TCA-TT--TA-T--A--------TAT----------T-C--TGCATT-TTCTGA----T-----T------------------CAGGATAT-T-TAACAATTCTGAAGAAGA-ACCAA--GATA-GAA----TAATA-ATT----------ACAA-AATAA-AAC
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9536480  86 +  39197703 --------------------------------------------------------------------------------------TT--TA-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------CAAGGTAT-T-TTACAATTCTAAAGGAGa-aacaa--aata-gga----taata-att----------acaa-aacaa-aac
i Ateles_geoffroyi_b.tarseq_2582                           I 52 C 0
s Ateles_belzebuth.k141_1348307                             57764  86 +     85812 --------------------------------------------------------------------------------------TT--TA-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------CAAGATAT-T-TTACAATTCTAAAGGAGa-aacaa--aata-gga----taata-att----------acaa-aacaa-aac
i Ateles_belzebuth.k141_1348307                         I 52 C 0
s Ateles_chamek.k141_1072810                                 8763  86 +     89302 --------------------------------------------------------------------------------------TT--TA-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------CAAGATAT-T-TTACAATTCTAAAGGAGa-aacaa--aata-gga----taata-att----------acaa-aacaa-aac
i Ateles_chamek.k141_1072810                            I 52 C 0
s Ateles_geoffroyi_a.k141_1300742                             13273  81 -     58268 --------------------------------------------------------------------------------------TT--TA-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------CAAGGTAT-T-TTACAATTCTAAAGGAGA-AACAA--AATA-GGA----TAATA-ATT----------ACAA-AA------C
i Ateles_geoffroyi_a.k141_1300742                         I 52 C 0
s Ateles_marginatus.k141_899112                             61259  86 +    119057 --------------------------------------------------------------------------------------TT--TA-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------CAAGATAT-T-TTACAATTCTAAAGGAGa-aacaa--aata-gga----taata-att----------acaa-aacaa-aac
i Ateles_marginatus.k141_899112                         I 52 C 0
s Ateles_paniscus.k141_1631200                               3210  86 -     25888 --------------------------------------------------------------------------------------TT--TA-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------CAAGATAT-T-TTACAATTCTAAAGGAGA-AACAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Ateles_paniscus.k141_1631200                          I 52 C 0
s Avahi_laniger.k141_2840928                                 3905 142 -     16375 ATTTAT-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-C-TTAT--G-GC--AG-G----TT-GCATT-CTCACTCAT-TT---A-T--A--------TAG----------T-CTCTGCATT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAGGAGA-GCCAA--AATA-GAA----TAATA-ATT----------ATAA-AATAA-AAC
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                               225 142 +      2719 ATTTAT-AACA-A---A-ACA-C---TT-T-CCAGAT--CTAGT-C-TTAT--G-GC--AG-G----TT-GCATT-CTCACTCAT-TT---A-T--A--------TAG----------T-CTCTGCATT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAGGAGA-GCCaa--aata-gaa----taata-att----------ataa-aataa-aac
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26377876 141 +  51448160 GTCTGT-AACA-A---A-ATA-CTT-TT-T-CCAGAT--TCAGT-T-TAAT--G-GC--AG-G----AT-GAATT-CTCAC-TCA-TT--TA-T--a--------tat----------t-ctctgcatt-ttctgA----C-----T------------------CGAGATAT-T-TCACAATTCTAAAGGAGA-ACCaa--aata-gaa----t---a-att----------acaa-aataa-aac
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        3107 141 -     13118 GTCTGT-AACA-A---A-ATA-CTT-TT-T-CCAGAT--TCAGT-T-TAAT--G-GC--AG-G----AT-GCATT-CTCAC-TCA-TT--TA-T--A--------TAT----------T-CTCTGCATT-TTCTGA----C-----T------------------CGAGATAT-T-TCACAATTCTAAAGGAGA-ACCaa--aata-gaa----t---a-att----------acaa-aataa-aac
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   40954 145 -     72089 ATCTAT-AACA-A---A-ACA-CTT-TT-T-CCAGAT--TCAGC-T-TAAT--G-GC--AG-G----AT-GCATT-TTCAC-TCA-TT--TA-T--A--------TAT----------G-CTCTGCATT-TCCTGT----T-----A------------------TAAGATCT-TTTCACAACTCTAAAGGAGA-ACCAA--AATA-GAA----CAATA-ATT----------ACAA-AATAA-AAC
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6556966 142 +   6870073 ATCTAT-AACA-A---A-ACA-CTT-TT-T-CCAGAT--TCAGC-T-TTAT--G-GC--AG-G----AT-GCATT-TTCAC-TCA-TT--TA-T--A--------TGT----------T-CTCTGCATT-TCCTGT----T-----A------------------CAAGATCT-TTTCACAATTCTAAA---GA-ACCAA--AATA-Gaa----caata-att----------acaa-aataa-aac
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138137202 145 - 161108492 ATCTAT-AACA-A---A-ACA-CTT-TT-T-CCAGAT--TCAGC-T-TTAT--G-GC--AG-G----AT-GCATT-TTCAC-TCA-TT--TA-T--A--------TNT----------T-CTCTGCATT-TCCTGT----T-----A------------------CAAGATCT-TTTCACAATTCTAAAGGAGA-ACCAA--AATA-GAN----caata-att----------acaa-aataa-aac
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     569576 145 -    998990 ATCTAT-AACA-A---A-ACA-CTT-TT-T-CCAGAT--TCAGC-T-TTAT--G-GC--AG-G----AT-GCATT-TTCAC-TCA-TT--TA-T--A--------TGT----------T-CTCTGCATT-TCCTGT----T-----A------------------CAAGATCT-TTTCACAATTCTAAAGGAGA-ACCAA--AATA-Gaa----caata-att----------acaa-aataa-aac
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136292935 145 - 158972876 ATCTAT-AACA-A---A-ACA-CTT-TT-T-CCAGAT--TCAGC-T-TTAT--G-GC--AG-G----AT-GCATT-TTCAC-TCA-TT--TA-T--A--------TGT----------T-CTCTGCATT-TCCTGT----T-----A------------------CAAGATCT-TTTCACAATTCTAAAGGAGA-ACCAA--AATA-GAc----caata-att----------acaa-aataa-aac
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1228691 145 -   1914593 ATCTAT-AACA-A---A-ACA-CTT-TT-T-CCAGAT--ACAGC-T-TTAT--G-GC--AG-G----AT-GCATT-TTCAC-TCA-TT--TA-T--A--------TGT----------T-CTCTGCATT-TCCTGT----T-----A------------------CAAGATCT-TTTCACAATTCTAAAGGAGA-ACCAA--AATA-Gaa----caata-att----------acaa-aataa-aac
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               111047 142 -    171031 AACTAT-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GCATT-CTTAC-TTA-TT--TA-T--A--------TAT----------T-CTCCGCAAT-TTCTAA----T-----T------------------CAAGATAT-T-TTATAATTCTAAAGGAGA-AACAA--AATA-GGA----TAATA-ATT----------ACAA-AATAA-AAC
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 10073 142 +    125063 AACTAT-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GCATA-CTTAC-TTA-TT--TA-T--A--------TAT----------T-CTCTGCAAT-TTCTAA----T-----T------------------CAAGATAT-T-TTATAATTCTAAAGGAGA-AACAA--AATA-GGA----TAATA-ATT----------ACAA-AATAA-AAC
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                12121 142 -    216513 AACTAT-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GCATT-CTTAC-TTA-TT--TA-T--A--------TAT----------T-CTCCGCAAT-TTCTAA----T-----T------------------CAAGATAT-T-TTATAATTCTAAAGGAGA-AACAA--AATA-GGA----TAATA-ATT----------ACAA-AATAA-AAC
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        4661 142 -    134917 AACTAT-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GCATT-CTTAC-TTA-TT--TA-T--A--------TAT----------T-CTCTGCAAT-TTCTAA----T-----T------------------CAAGATAT-T-TTATAATTCTAAAGGAGA-AACAA--AATA-GGA----TAATA-ATT----------ACAA-AATAA-AAC
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3217305 135 -   8989139 --------aca-a---a-ata-a-tttt-t-ccagaT--TCGAT-T-TTAT--G-GC--AG-G----AT-GCATT-TTCAC-TCA-TT--TA-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAATTGTAAAGAAGA-TCcaa--aata-gaa----taata-att----------acat-aataa-a--
i Camelus_bactrianus.KN276303.1                         C 0 I 1
s Camelus_dromedarius.KN271192.1                           395009 135 -  15254737 --------aca-a---a-ata-a-tttt-t-ccagaT--TCGAT-T-TTAT--G-GC--AG-G----AT-GCATT-TTCAC-TCA-TT--TA-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------CCAGATAT-T-TCACAATTGTAAAGAAGA-Tccaa--aata-gaa----taata-att----------acat-aataa-a--
i Camelus_dromedarius.KN271192.1                        C 0 I 1
s Camelus_ferus.KB016973.1                                2970743 135 +   6889770 --------aca-a---a-ata-a-tttt-t-ccagaT--TCGAT-T-TTAT--G-GC--AG-G----AT-GCATT-TTCAC-TCA-TT--TA-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAATTGTAAAGAAGA-Tccaa--aata-gaa----taata-att----------acat-aataa-a--
i Camelus_ferus.KB016973.1                              C 0 I 1
s CanFam4.chr31                                          11515856  78 +  39901454 -----------------------------------------------------------------------------------------------------------T----------T-CTCTGCATT-TTCCGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAGGAGa-accaa--aata-gaa----taata-att----------acaa-aacaa-aac
i CanFam4.chr31                                         I 58 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   10874  78 +     87036 -----------------------------------------------------------------------------------------------------------T----------T-CTCTGCATT-TTCCGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAGGAGA-ACCAA--AATA-GAA----TAATA-ATT----------ACAA-AACAA-AAC
i Canis_lupus_VD.CanFam_VD_scaffold_16982               I 58 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11262517  78 -  35597290 -----------------------------------------------------------------------------------------------------------T----------T-CTCTGCATT-TTCCGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAGGAGA-accaa--aata-gaa----taata-att----------acaa-aacaa-aac
i Canis_lupus_dingo.QKWQ01001993.1                      I 58 C 0
s Canis_lupus_familiaris.chr31                           11085046  78 +  39895921 -----------------------------------------------------------------------------------------------------------T----------T-CTCTGCATT-TTCCGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAGGAGa-accaa--aata-gaa----taata-att----------acaa-aacaa-aac
i Canis_lupus_familiaris.chr31                          I 58 C 0
s Canis_lupus_orion.HG994411.1                           16452070  78 -  44759192 -----------------------------------------------------------------------------------------------------------T----------T-CTCTGCATT-TTCCGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAGGAGA-accaa--aata-gaa----taata-att----------acaa-aacaa-aac
i Canis_lupus_orion.HG994411.1                          I 58 C 0
s Capra_aegagrus.CM003214.1                              21322961  84 + 157394656 ATCTAT-AACA-A---A-ACA-CTT-TT-T-CCAGAT--TCAGC-T-TAAT--A-GC--AG-G----AT-GCATT-TTCAC-TCA-TT--TA-T--A--------TAT----------G-CTCTGCATT-TCCTGT----T----------------------------------------------------------------------------------------------------------
i Capra_aegagrus.CM003214.1                             C 0 I 61
s Capra_hircus.CM004562.1                               135704188  84 - 157403528 ATCTAT-AACA-A---A-ACA-CTT-TT-T-CCAGAT--TCAGC-T-TAAT--A-GC--AG-G----AT-GCATT-TTCAC-TCA-TT--TA-T--A--------TAT----------G-CTCTGCATT-TCCTGT----T----------------------------------------------------------------------------------------------------------
i Capra_hircus.CM004562.1                               C 0 I 61
s Capromys_pilorides.CapPil_scaffold_647363                  1694 135 +      1887 AAGTGT-AACA-A---A-GCA-C---TT-T-CTGGTT--CTATG-T-TTAG--G-AC--AG-G----GT-GCTT--CAGAC-TCA-CT--CT-G--A--------CGT----------C-TTCTGCATT-CTTGGA----T-----A------------------GAGGATAA-T-TCCAAATTCTAAAGAAGA-ATCCT---GTG-GAG----TAATA-ATT----------ATAA-AAC------
i Capromys_pilorides.CapPil_scaffold_647363             C 0 N 0
s Carlito_syrichta.NW_007248099.1                          306326 108 +    345090 --------------------------------------------------T--G-GC--AA-A----AG-TCATT-GTCAC-TCA-TT--TA-T--A--------TGA----------T-CTCTGCATT-TTCTGA----T-----T------------------CAAGGTAT-T-TCACAATTCTAAAGGAGA-Accaa--aata-gaa----taata-att----------acaa-aacaa-aat
i Carlito_syrichta.NW_007248099.1                       I 23 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               57226 141 +     67245 CTCTAT-AACA-G---A-ACA-CTT-TT-T-CCAGAT--TCAGT-TTTTAT--G-GA--AG-G----AT-GCA---CTTGC-TCA-TT--TA-T--G--------TAT----------T-C--TGCATT-TTCTGA----T-----T------------------CAAGATAT-T-TAACAATTCTATGGGAGA-ACCAA--AATA-TAA----TAATA-ATT----------ATAA-AATAA-AAC
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   27714 138 +     33760 ATCTAC-AACA-A---A-GCA-C---TT-T-GTGGAC--CTAGT-T-TTAT--G-GC--AA-G----GT-ACATT-CTCAT-CCA-CT--TA-A--A--------TAT----------T-CTCAGCATA-TTCTGA----T-----T------------------CAACATAC-T-TCACAGTTCTAAAGGCGA-ACCAAA-AATA-GGA----TAATA-ATT----------ACAA-AAT------
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   156581  82 -    276539 ---------------------------------------------------------------------------------------------------------TCT----------G-CTTTGCATT-TTCTGC----T-----T------------------CAATATAT-T-TCACAACTCTAAGGGAGA-GCAAA--AATA-GAA----TAATAAATT----------ACAA-AATAAAGAC
i Catagonus_wagneri.CatWag_scaffold_1305                I 60 C 0
s Cavia_aperea.AVPZ01000278.1                            15783880 137 -  24422027 atatat-aaca-a---a-ata-t---gt-t-CCAGGA--CTATTCT-TTAG--G-AC--AA-G----AT-GCTTC-CTcat-tca-tt--ta-t--a--------tat----------c-ttcaacATT-CTTGGA----T-----G------------------CAAGGTAT-T-TCCAAATtctaaaggaga-aacaa--aata-ga-----taata-att----------acaa-aac------
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15795814 135 -  24440124 atatat-aaca-a---a-ata-t---gt-t-CCAGGA--CTATTCT-TTAG--G-AC--AA-G----AT-GCTTC-Ctcat-tca-tt--ta-t--a--------tat----------c-ttcagcATT-CTTGGA----T-----G------------------CAAGGTAT-T-TCCAAATtctaaaggaga-aacaa--aata-ca-------gta-att----------acaa-aac------
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       174005 135 +    436027 ATATAT-AACA-A---A-ATA-T---GT-T-CCAGGA--CTATTCT-TTAG--G-AC--AA-G----AT-GCTTC-CTCAT-TCA-TT--TA-T--A--------TAT----------C-TTCAGCATT-CTTGGA----T-----G------------------CAAGGTAT-T-TCCAAATTCTAAAGGAGA-AACAA--AATA-CA-------GTA-ATT----------ACAA-AAC------
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18887899 142 -  29618158 AACTAT-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GCATT-CTTAC-TTA-TT--TA-T--A--------TAT----------T-CTCTGCAAT-TTCTGG----T-----T------------------CAAGATAT-T-TTACAATTCTAAAGGAGA-AACAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 5443 142 -     26817 AACTAT-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GCATT-CTTAC-TTA-TT--TA-T--A--------TAT----------T-CTCTGCAAT-TTCTGG----T-----T------------------CAAGATAT-T-TTACAATTCTAAAGGAGA-AACAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                 9686 142 +     25043 AACTAT-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GCATT-CTTAC-TTA-TT--TA-T--A--------TAT----------T-CTCTGCAAT-TTCTGG----T-----T------------------CAAGATAT-T-TTACAATTCTAAAGGAGa-aacaa--aata-gga----taata-att----------acaa-aacaa-aac
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         5363 108 +     21754 --------------------------------------------------T--G-GC--AA-A----AG-TCATT-ATCAC-TCA-TT--TA-T--A--------TGA----------T-CTCTGCATT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAGGAGA-ACCAa--aata-gaa----taata-att----------acaa-aacaa-aat
i Cephalopachus_bancanus.k141_702587                    I 23 C 0
s Ceratotherium_simum.JH767818.1                          4361017 144 +   7569818 ATTTAT-AACA-A---A-TAC-TTT-TT-T-CCAGAT--TCAGT-T-TTAT--G-AC--AG-G----AT-GCATT-CTCAC-TCA-TT--TA-C--A--------TAT----------T-CTCTGCATT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAGGAGa-accaa--aata-gaa----taata-att----------acaa-aacaa-aac
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623          772 144 -      9338 ATTTAT-AACA-A---A-TAC-TTT-TT-T-CCAGAT--TCAGT-T-TTAT--G-AC--AG-G----AT-GCATT-CTCAC-TCA-TT--TA-C--A--------TAT----------T-CTCTGCATT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAGGAGA-ACCAA--AATA-GAA----TAATA-ATT----------ACAA-AACAA-AAC
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6551822 142 +   6739814 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GTATT-CCTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-Gga----taata-att----------acaa-aacaa-aac
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      53299 142 -     54931 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GTATT-CCTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         18283 142 -     19697 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GTATT-CCTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         55814 142 -    107033 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GTATT-CCTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        2259 142 -      3853 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGGT--T-GC--AG-A----GC-GTATT-TCTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          26192 142 +     30494 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGGT--T-GC--AG-A----GC-GTATT-CCTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           2216 142 -      4022 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGGT--T-GC--AG-A----GC-GTATT-CCTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          2109 142 -      3505 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GTATT-CCTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           20899 142 +     35983 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GTATT-CCTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-C-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11987435 142 +  12117833 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGAT--ATAGT-T-TGGT--T-GC--AG-A----GC-ATATT-CCTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46474188 142 +  46592721 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GTATT-CCTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-C-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      32015 142 +     33420 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-AC--AG-A----GT-GTATT-CCTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-C-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        2051 142 -      3443 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGAT--ATAGT-T-TGGT--T-GC--AG-A----GC-ATATT-CCTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      3042 142 -      4669 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGGT--T-GC--AA-A----GC-GTATT-CCTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        2842 137 -      4411 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGGT--T-GC--AG-A----GC-GTATT-CCTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-C-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGA----TAATA-ATT----------ACAA-AA------C
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         2367 142 -      4205 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGGT--T-GC--AG-A----GC-GTATT-CCTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_1070855           575 143 -      1715 ATCTAT-AACA-A---A-ATA-CTT-TT-T-CCAGATTTCTAGT-T-TTAT--G-TC--AG-T----GT-GCATT-CTGAC-TCA-GT--TA-T--A--------TAT----------T-CTCTGCACA-TTTTGA----T-----T------------------CAAGATAA-T-TCACAATTCTAAA---GA-ACCAA--AATA-GAA----TAATA-ATT----------ACAA-AACAA-AAC
i Chaetophractus_vellerosus.ChaVel_scaffold_1070855     C 0 C 0
s Cheirogaleus_major.k141_1157592                           56210 142 -     68416 ATCTAT-AACA-A---G-ACA-C---TT-T-CCAGAT--CTAGT-C-TTAA--G-GC--AG-A----GT-GCATT-CTCAC-TCATTT---A-T--A--------AAG----------T-CTCTGCATT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAGGAGA-GCCAA--AATA-GAA----TAATA-ATT----------ACAA-AATAA-AAC
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            5256 142 +     13308 ATCTAT-AACA-A---G-ACA-C---TT-T-CCAGAT--CTAGT-C-TTAA--G-GC--AG-A----GT-GCATT-CTCAC-TCATTT---A-T--A--------TAG----------T-CTCTGCATT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAGGAGA-GCCAA--AATA-GAA----TAATA-ATT----------ACAA-AATAA-AAC
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             2721 142 -     18223 AACTAT-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GCATT-CTTAC-TTA-TT--TA-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------CAAGATAT-T-TTACAATTCTAAAGGAGA-AACAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             19744 142 +     25473 AACTAT-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GCATT-CTTAC-TTA-TT--TA-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------CAAGATAT-T-TTACAATTCTAAAGGAGa-aacaa--aata-gga----taata-att----------acaa-aacaa-aac
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           38783 142 +     57117 AACTAT-AACA-A---A-ACA-C---TT-T-CTACAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GCATT-CTTAC-TTA-TT--TA-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------CAAGATAT-T-TTACAATTCTAAAGGAGa-aacaa--aata-gga----taata-att----------acaa-aacaa-aac
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          43458 142 +     54541 AACTAT-AACA-A---A-ACA-C---TT-T-CTACAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GCATT-CTTAC-TTA-TT--TA-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------CAAGATAT-T-TTACAATTCTAAAGGAGa-aacaa--aata-gga----taata-att----------acaa-aacaa-aac
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15959049 137 +  43084221 ACATAC-AACA-A---A-GTA-C---TT-T-CAGGTA--CTATT-G-TTAG--G-AT--AC-G----GT-GCTTG-CAcac-tca-tt--tt-t--a--------tat----------c-ttctgcatT-CTTGGA----T-----A------------------CAGGATAT-T-TCCAAATTCTAGAGAAGA-ATCCG--AATA-GAG----taata-att----------acaa-aat------
i Chinchilla_lanigera.JH721867.1                        I 18 C 0
s Chiropotes_israelita.k141_1189915                         68268 142 +    196370 AACTAT-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GCATT-CTTAC-TTA-TT--TA-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------CAAGATAT-T-TTATAATTCTAAAGGAGA-AACAA--AATA-GGA----CAATA-ATT----------ACAA-AATAA-AAC
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          12449 142 +     40510 AACTAT-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GCATT-CTTAC-TTA-TT--TA-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------CAAGATAT-T-TTATAATTCTAAAGGAGA-AACAA--AATA-GGA----CAATA-ATT----------ACAA-AATAA-AAC
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15135649 142 -  15256731 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGGC--TTAGT-T-TGGT--T-GC--AG-A----GC-GTATT-CTTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      30695 142 -     53260 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGGC--TTAGT-T-TGGT--T-GC--AG-A----GC-GTATT-CTTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGA----TAATA-ATT----------ACAA-AACAG-AAC
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101141144 142 + 101219884 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGAC--TTAGT-T-TGGT--T-GC--AG-A----GC-GTATt-cttat-tca-tt--tg-t--a--------tat----------t-ctCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-Gga----taata-att----------acaa-aacaa-aac
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                14178 146 -     21363 ATCTAT-AACC-A---A-ATG-CTTTTT-T-CCAGATTTCTA-T-T-TTAT--A-GC--AG-G----GT-GCATT-CTGAC-TCA-TT--TT-T--A--------TAT----------T-CTCTACAT--TTTTGA----T-----T------------------CAAGATAA-T-TCACAATTCAAAAGAAGA-ACCAA--AATA-GAA----TAATA-ATT----------ATAAAAACAA-AAC
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           759488 146 +    964067 ATCTAT-AACC-A---A-ATG-CTTTTT-T-CCAGATTTCTA-T-T-TTAT--A-GC--AG-G----GT-GCATT-CTGAC-TCA-TT--TT-T--A--------TAT----------T-CTCTACAT--TTTTGA----T-----T------------------CAAGATAA-T-TCacaattcaaaagaaga-accaa--aata-gaa----taata-att----------ataaaaacaa-aac
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_141308              6322 104 -     12508 -------------------------------------------------AT--G-TC--AG-G----GT-GCATT-CTGAC-TCA-TT--TA-T--AATATCTTGCCT----------T-TT----------CTGG----A-----T------------------CAAGATAT-T-TCATAATTCTAAAAGGAA-AA------ATA-GAA----TAATA-ATT----------ATAA-ATCAA-AAT
i Chrysochloris_asiatica.ChrAsi_scaffold_141308         I 30 C 0
s Colobus_angolensis.KN985967.1                          10879723 142 +  10971483 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----CT-GTATT-cttat-tca-tt--tg-t--a--------tat----------t-ctCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-TCACaattctaaagaaaa-atcaa--aata-gga----taata-att----------acaa-aacaa-aac
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147660881 142 + 156195979 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----CT-GTATT-CTTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-TCACAATTCTAAAGAAAA-ATCAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            12868 142 +     23629 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GTATT-CTTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-TCACAATTCTAAAGAAAA-ATCAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60610484 142 +  78930452 Gtctat-aaca-a---a-ata-a-ttt--t-cctagT--TCAGT-T-TTAT--G-GT--AG-A----AT-GTATT-CTCAC-TCA--TCACA-T--A--------TAT----------T-CTCTGCATT--TCAGA----T-----C------------------CAAGATAT-T-CC-CAATTCTaaatgaga-accaa--aata-gaa----taata-att----------acaa-aataa-aac
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         36934 144 -     40477 ATCTAT-AACA-A---A-ATA-CTT-TT-C-TCATAT--TTGTT-T-TTTTGGG-GC--AG-G----AT-GCATT-CTCAC-TCA-TT--TA-A--A--------TAT----------T-C--TGCATT-TTTTGT----T-----T------------------CAAGACAT-T-TGACAGTTCTAAAGGAGA-ACCAA--AATA-GCA----TAATA-ATT----------ACAA-AATAA-AAC
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 274827  83 -    399297 -------------------------------------------------------------------------TT-C---T-TTA-TT--TA-T--T--------TAT----------T-CCCTTTCTT-CTCTGA----C-----T------------------CACGATAC-T-TTAAAATTCTAAAAAAGA-AACA---AATA-AAG----TAATA-ATT----------ACA-----------
i Cricetomys_gambianus.CriGam_scaffold_949              I 34 C 0
s Cricetulus_griseus.LT883672.1                          53026360  85 +  72327488 -------------------------------------------------------------------------TT-C---T-TTC-TT--TA-T--G--------TAA----------T-CCCTTTCTT-CTATGA----T-----T------------------CAAGTTAT-T-TGGTAAttctaaagaaga-aacaa-aaatg-aag----taaTA-ATT----------ACA-----------
i Cricetulus_griseus.LT883672.1                         I 34 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             17473 100 -     19186 --------------------------------------------------------g--ag-a----AT-ATATT-GCCAG-ACA-TT--TA-T--A--------TAT----------C-CCTTACATT-TT---A----T-----T------------------CAACATAT-T-TTACAATCCTAAGCATGT-ACCACACAATA-G--------ATA-ATT----------ATAA-AATTA-TAA
i Crocidura_indochinensis.CroInd_scaffold_38409         I 249 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            49165  77 -     70449 -----------------------------------------------------------------------------------------------------------T----------T-CTCTGCATT-TTCT-A----T-----T------------------CAAGATAT-T-TCACAATTCTAAAGGAGA-ACCAA--AATA-GAA----TAATA-ATT----------ACAA-AATAA-AAC
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 54 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  205558  62 -    956709 -------------------------------------------------------------------------------------------------------------------------TCTGCATT-CAC-------T-----C------------------CAAAAAAT-A-TCCCAATGGTAAT---GA-GCCAA--AATA-GAA----TAATA-ATT----------TTAA-A--------
i Ctenodactylus_gundi.CteGun_scaffold_447               I 61 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 27828 135 -     67205 ATGTGC-AACA-A---G-GCA-C---TT-T-CCAGCA--CTATT-T-TTAG--G-AC--AG-G----GT-GCTT--CAGGC-TCA-CA--TT-T--G--------TGC----------C-TTCTGCATT-CTTGGA----T-----A------------------TGGGATAT-T-TCCAAATTCTGAAGGAGA-AACCA---CTA-GAG----TAATA-ATT----------ACAA-AAC------
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                14663 136 +     26546 ATATAT-AACA-A---A-GTA-C---TT-T-CCAGGA--CTATTGT-TTAG--G-AC--AG-G----AT-ATTTC-CTCAC-ACA-TT--TA-T--A--------TAT----------C-TTCGACATT-CTTGGA----T-----G------------------CAGGATAT-T-TCCAAATTCTAAAGGAGA-ACCCA--AACA-CAG----TGATA-ACT----------ATAA-A--------
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             56136 138 -    236241 ATATAC-AACA-A---A-GTA-C---TT-T-CCAGGA--CTGTATT-TTAG--G-AC--AA-G----AT-ACTTC-CTCAC-TCA-TT--TA-T--A--------TAT----------C-ACCACCATT-CTTGGA----T-----G------------------CAGGATAT-T-TCCAAATTCTAAAGGAGA-ACCCA--AATA-GAG----TAATA-ATT----------ATAA-AAC------
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          179384 143 -   6883506 ATCTAT-AACA-A---A-ATA-CTT-TT-T-CCAGATTTCCAGG-T-TTAT--G-TC--AG-T----GT-ATATT-TAGAT-TCG-TT--TA-T--A--------GAT----------T-CTCTGCCTC-TTTTGA----T-----T------------------CAAGATAA-T-TCacaattctaaa---ga-acaaa--aata-gaa----taata-att----------acaa-aacaa-aac
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16842078 142 +  31942871 ATCTAT-AACA-A---A-ACA-C---TT-C-CCAGAT--CTAGT-C-TTTT--G-GC--AG-G----GT-GCATT-CTGAC-TCA-TT--TA-T--A--------CAT----------C-CTCTGCATT-TTCTCA----T-----T------------------CAAGATAT-T-CCACAATTCTAAAGGAGA-ACCAA--AATA-GAA----TAATA-ATT----------ACAA-AATAA-AAC
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80034560 141 -  96802777 GCCTGT-AACA-A---A-ATA-CGT-TT-T-CCAGAT--TCAGT-T-TTAT--G-GC--AG-G----AT-GCATT-CTCAC-TCA-TT--TA-T--A--------TAT----------T-CTCTGCATT-TTCTGA----C-----T------------------CGAGATAT-T-TCGTAATTCTAAAGGAGA-ACCaa--aata-gaa----t---a-att----------acaa-aataa-aac
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18696538 141 -  18957592 ACcgaa-aata-a---a-aca-c-tttt-t-ccAGAT--TCAGT-TTTTAT--G-GC--AG-G----AT-GCA---CTCGC-TCA-TT--TA-T--C--------TAT----------T-C--TGCATT-TTCTGA----T-----T------------------CAAGATAT-T-TAACAATTCTAAAGGAGA-ATCAA--AATA-GAa----tgata-att----------acaa-aataa-aac
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 319678 144 +    993696 ATTTAT-AACA-A---A-TAC-TTT-TT-T-CCAGAT--TCAGT-T-TTAT--G-AC--AG-G----AT-GCATT-CTCAC-TCA-TT--TA-C--A--------TAT----------T-CTCTGCATT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAGGAGA-Accaa--aata-gaa----taata-att----------acaa-aataa-aac
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                    318 144 +    151128 ATTTAT-AACA-A---A-TAC-TGT-TT-T-CCAGAT--TCAGT-T-TTAT--G-AC--AG-G----AT-GCTTT-CTCAC-TCA-TT--TA-C--A--------TAT----------T-CTCTGCATT-TTCTGA----T-----T------------------CAAGATAT-T-TCACCATTCTAAAGGAGA-ACTAA--AACA-GAA----TAATA-ATT----------ACAA-AATAA-AAC
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   154940 132 +    228994 ATA------CA-A---A-GTA-C---TT-T-CAAGTA--CTATT-T-TTAG--G-AC--AG-G----GT-GCTTC-CATAT-TCA-TT--TG-C--A--------TAT----------C-TTCTGCATT-CTCGGA----T-----A------------------CAGGGTAT-T-TCCAAATTCTAAAGAAGA-ATCCA--AATA-GAG----CAATA-ATT----------ACAA-AAC------
i Dinomys_branickii.DinBra_scaffold_1996                I 18 C 0
s Dipodomys_ordii.KN672545.1                              3652693 129 +   4240102 ATCTAT-AACT-G---A-ACA-C---TT-T-CCAG------AGT-T-TTAC--A-GC--AG-T----AT-ACATT-CTCAC-TCA-GT--TA-A--A--------TTT----------T-CTCCACGTT-CT-TGA----T-----T------------------TGA--TTC-T-TTACAATTCTAAAAGAGA-ACCAA--AATA-Gag----gaa-a-att----------acaa-aac------
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 24248 133 +     28912 ATCTAT-AACT-G---A-ACA-C---TT-T-CCAGAC--AGAGT-T-TTAC--A-GC--AG-T----AT-ACATT-CTCAC-TCA-GT--TA-A--A--------TTT----------T-CTCCACGTT-CT-TGA----G-----T------------------TGA--TTC-T-TTACAATTCTAAAAGAGA-ACCAA--AATA-GAG----GAA-A-ATT----------GCAA-AAC------
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                33391 140 -     73477 ATATAT-AACA-A---A-GTA-C---AT-T-CTAGGA--CTATTTG-TTAG--G-AC--AG-G----AT-GCTTC-CTCAC-TCA-TT--TA-TATA--------TAT----------C-TTCAGCATT-CTTGTA----T-----G------------------CAGGATAT-T-TCCAAATTCTAAAGGAGA-AACCA--AATA-GAG----TAATA-ATT----------ACAA-AAA------
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.AAIY02274224.1                             81 141 +      1655 atctat-aaaa-a---t-ata-t-agtt-t-ccAGATTTCTAGT-T-TTCT--G-TT--GG-A----TT-A-AT---TGAC-TCA-TT--TA-T--A--------TCA----------T-TC----------CTGCTTCTTCTGAAT------------------CAAGGCAT-T-TCACAATTCTAAAATGGA-AACAA--CATA-GAA----TAATA-ATT----------ATCA-AACGA-A--
i Echinops_telfairi.AAIY02274224.1                      C 0 C 0
s Eidolon_helvum.KE772537.1                                  9982  74 +     24177 ------------------------------------------------------------------------------------------------------------------------c--tgcatt-ttctat----t-----t------------------caagaTAT-T-TGATAATTCTAAAGGAGA-accaa--aata-gaa----taata-att----------acaa-aataa-aac
i Eidolon_helvum.KE772537.1                             I 67 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1489222 142 +   1727528 ATCTAT-AACA-A---A-ACA-CTT-TT-T-CCAGAT--TCAGC-T-TTAT--G-GC--AG-G----AT-GCATT-TTCAC-TCA-TT--TA-T--A--------TAT----------T-CTCTGCATT-TCCTGA----T-----A------------------CAAGATCT-TTTCACAATTCTAAAGGAGA-ACCAA--AATA-GAA----CAata-att----------acag----aa-aac
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7803970 147 +  15467074 GTTTAC-AGCA-T---A-ATA-CAT-AT-T-CCAGACGTCTACT-T-TTAT--G-TC--AT-G----TC-GTATT-CTAAC-TCA-TT--ac-t--a--------tttttttctgtgtt-tt----------ctaa----t-----t------------------ccagacat-t-tcacatttttaaaaggaa-accaA--AATA-GAA----TAATA-ATT----------ACAA-ATCAA-AGC
i Elephantulus_edwardii.JH947210.1                      I 3 C 0
s Ellobius_lutescens.LOEQ01003611.1                        237017  85 -    369425 -------------------------------------------------------------------------tt-c---t-ttc-tt--tc-t--t--------tat----------t-cactttctt-ctctta----t-----t------------------caagatat-t-ttataattctaaagaaga-aacaa-aaata-aag----taata-att----------aca-----------
i Ellobius_lutescens.LOEQ01003611.1                     I 35 C 0
s Ellobius_talpinus.LOJH01090055.1                           4033  84 -      7838 -------------------------------------------------------------------------tt-c---t-ttc-tt--tc-t--t--------tat----------t-ccttttctt-ctccta----t-----t------------------caagatat-t-ttataattctaaagaaga-aacaa--aata-aag----taata-att----------acA-----------
i Ellobius_talpinus.LOJH01090055.1                      I 35 C 0
s Enhydra_lutris.KZ291749.1                              85868928  78 +  99434291 -----------------------------------------------------------------------------------------------------------T----------T-CTCTGCATT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAATTCTGAAGGAGa-accaa--aata-gaa----taata-att----------acaa-aacaa-aac
i Enhydra_lutris.KZ291749.1                             I 59 C 0
s Equus_asinus.JREZ01000062.1                             5850398 145 -   7175178 ATTTat-aaca-a---a-tac-t-tttt-t-ccagGT--TCACT-T-TTAT--G-AC--AG-G----AT-GCATT-CTCAC-TCA-AT--TA-C--A--------TAT----------T-CTCTGCATT-TTCTGA----T-----T------------------CAAGATAT-TTTCACAATTCTAAAGgaga-acaaa--aata-gaa----taata-att----------acaa-aacaa-aac
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13348900 145 +  41866177 ATTTAt-aaca-a---a-tac-t-tttt-t-ccaGGT--TCACT-T-TTAT--G-AC--AG-G----AT-GCATT-CTCAC-TCA-AT--TA-C--A--------TAT----------T-CTCTGCATT-TTCTGA----T-----T------------------CAAGATAT-TTTCACAATTCTAAAGGAGa-accaa--aata-gaa----taata-att----------acaa-aacaa-aac
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          10390 145 +     92910 ATTTAt-aaca-a---a-tac-t-tttt-t-ccaGGT--TCACT-T-TTAT--G-AC--AG-G----AT-GCATT-CTCAC-TCA-AT--TA-C--A--------TAT----------T-CTCTGCATT-TTCTGA----T-----T------------------CAAGATAT-TTTCACAATTCTAAAGGAGa-accaa--aata-gaa----taata-att----------acaa-aacaa-aac
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11530213 124 +  16010500 --------------------------TT-C-CCAGGA--CCAGT-T-TTAT--A-GC--AA-G----AC-ATGTT-CTTAT-GTG-TT--TA-T--A--------TAT----------T-CTCTGCATT-TTCTGA----T-----T------------------CAAGA-AT-T-GTACAGTTCTACATGgga-accaa--aata--aa----taata-att----------gcaa-aataa-aac
i Erinaceus_europaeus.JH835290.1                        I 17 C 0
s Erythrocebus_patas.Contig8                             48767827 142 -  48907691 AACTAC-AACA-C---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGGT--T-GC--AG-A----GT-GTATT-CCTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-TTACAATTCTAAAGGAAA-ACCAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          312762 141 +    330699 GTCTAT-AACA-A---A-ATA-CTT-TT-T-CCAGAT--TCAGT-T-TTAT--G-GC--AG-G----AT-GCATT-CTCAC-TCA-TT--TA-T--A--------TAT----------T-CTCTGCATT-TTCTGA----C-----T------------------CGAGATAT-T-TCACAATTCTAAAGGAGA-ACCAA--AATA-GAA----T---A-ATT----------ACAA-AATAA-AAC
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             59192 141 +     89355 GTCTAT-AACA-A---A-ATA-CTT-TT-T-CCAGAT--TCAGT-T-TTAT--G-GC--AG-G----AT-GCATT-CTCAC-TCA-TT--TA-T--A--------TAT----------T-CTCTGCATT-TTCTGA----C-----T------------------CGAGATAT-T-TCACAATTCTAAAGGAGA-ACCAA--AATA-GAA----T---A-ATT----------ACAA-AATAA-AAC
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              2258 143 +     13586 ATCTAC-AAAAGA---A-ACA-C---TT-T-CCAGAT--CTAGT-C-TTAT--G-GC--AG-G----GT-GCATT-CTCAC-TCA-TT--TA-T--A--------TAG----------T-CTCTGCATT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAGGAGA-GCCAA--AATA-GAA----TAATA-ATT----------ACAA-AATAA-AAC
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               2193 143 -      6809 ATCTAC-AAAAGA---A-ACA-C---TT-T-CCAGAT--CTAGT-C-TTAT--G-GC--AG-G----GT-GCATT-CTCAC-TCA-TT--TA-T--A--------TAG----------T-CTCTGCATT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAGGAGA-GCCAA--AATA-GAA----TAATA-ATT----------ACAA-AATAA-AAC
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             8666 143 +     36558 ATCTAC-AAAAGA---A-ACA-C---TT-T-CCAGAT--CTAGT-C-TTAT--G-GC--AG-G----GT-GCATT-CTCAC-TCA-TT--TA-T--A--------TAG----------T-CTCTGCATT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAGGAGA-GCCAA--AATA-GAA----TAATA-ATT----------ACAA-AATAA-AAC
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             4982 143 +     60246 ATCTAC-AAAAGA---A-ACA-C---TT-T-CCAGAT--CTAGT-C-TTAT--G-GC--AG-G----GT-GCATT-GTCAC-TCA-TT--TA-T--A--------TAG----------T-CTCTGCATT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAGGAGA-GCCAA--AATA-GAA----TAATA-ATT----------ACAA-AATAA-AAC
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 8470 143 +    109717 ATCTAC-AAAAGA---A-ACA-C---TT-T-CCAGAT--CTAGT-C-TTAT--G-GC--AG-G----GT-GCATT-CTCAC-TCA-TT--TA-T--A--------TAG----------T-CTCTGCATT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAGGAGA-GCCAA--AATA-GAA----TAATA-ATT----------ACAA-AATAA-AAC
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               12844 143 +     16540 ATCTAC-AAAAGA---A-ACA-C---TT-T-CCAGAT--CTAGT-C-TTAT--G-GC--AG-G----GT-GCATT-CTCAC-TCA-TT--TA-T--A--------TAG----------T-CTCTGCATT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAGGAGA-GCCAA--AATA-GAA----TAATA-ATT----------ACAA-AATAA-AAC
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                13120 143 +     27497 ATCTAC-AAAAGA---A-ACA-C---TT-T-CCAGAT--CTAGT-C-TTAT--G-GC--AG-G----GT-GCATT-CTCAC-TCA-TT--TA-T--A--------TAG----------T-CTCTGCATT-TTCTGC----T-----T------------------CAAGATAT-T-TCACAATTCTAAAGGAGA-GCCAA--AATA-GAA----TAATA-ATT----------ACAA-AATAA-AAC
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           15582 143 +     26808 ATCTAC-AAAA-AAAAA-ACA-C---TT-T-CCAGAT--CTAGT-C-TTAT--T-GC--AG-G----GT-GCATG-CTCAC-TCA-TT--TA-T--A--------TAG----------T-CT--GCGTT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAGGAGA-GCCAA--AATA-GAA----TAATA-ATT----------ACAA-AATAA-AAC
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                30310 143 +     46535 ATCTAC-AAAAGA---A-ACA-C---TT-T-CCAGAT--CTAGT-C-TTAT--G-GC--AG-G----GT-GCATT-CTCAC-TCA-TT--TA-T--A--------TAG----------T-CTCTGCATT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAGGAGA-GCCAA--AATA-GAA----TAATA-ATT----------ACAA-AATAA-AAC
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              13033 143 -     29447 ATCTAC-AAAAGA---A-ACA-C---TT-T-CCAGAT--CTAGT-C-TTAT--G-GC--AG-G----GT-GCATT-CTCAC-TCA-TT--TA-T--A--------TAG----------T-CTCTGCATT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAGGAGA-GCCAA--AATA-GAA----TAATA-ATT----------ACAA-AATAA-AAC
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129890130  78 - 159252932 -----------------------------------------------------------------------------------------------------------t----------t-ctctgcatT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAGTTCTAAAGGAGA-accaa--aata-gaa----taata-att----------acaa-aataa-aac
i Felis_catus.CM001386.2                                I 58 C 0
s Felis_catus_fca126.CM031420.1                         129277205  78 - 158578461 -----------------------------------------------------------------------------------------------------------t----------t-ctctgcatT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAGTTCTAAAGGAGA-accaa--aata-gaa----taata-att----------acaa-aataa-aac
i Felis_catus_fca126.CM031420.1                         I 58 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 18339  78 +     52776 -----------------------------------------------------------------------------------------------------------T----------T-CTCTGCATT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAGTTCTAAAGGAGA-ACCAA--AATA-GAA----TAATA-ATT----------ACAA-AATAA-AAC
i Felis_nigripes.FelNig_flattened_line_8080             I 58 C 0
s Fukomys_damarensis.KN123630.1                          13890021 136 -  19261668 ataaat-aaca-a---a-aca-c---tt-C-CCAGTC--CTAGC-T-GTAT--G-AC--AG-G----GT-ACTTT-CTCac-tca-tt--tg-t--a--------tat----------c-ttctgc-TT-CTTGGA----T-----T------------------CAAGATAT-T-TCCAAATTCTGAAGGAAT-ACCCA--AATA-GAG----Tgata-att----------acaa-aac------
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     208263  79 -    847004 ----------------------------------------------------------------------------------------------------------AT----------T-GTTTACATT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAAGAAA-ACCGA--AATA-GAA----TAATA-ATT----------GCAA-AATAA-AAG
i Galago_moholi.ctg555                                  I 58 C 0
s Galago_senegalensis.k141_964197                           10644  79 -     43889 ----------------------------------------------------------------------------------------------------------AT----------T-GTTTACATT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAAGAAA-ACCGA--AATA-GAA----TAATA-ATT----------GCAA-AATAA-AAG
i Galago_senegalensis.k141_964197                       I 58 C 0
s Galagoides_demidoff.k141_1769638                           7711  77 +     27357 ----------------------------------------------------------------------------------------------------------AT----------T-GTTTATGGT-TTCTGA----T-----T------------------CAAGATAT-T-TTACAATTCTaaaagaaa-accaa--aata-gaa----taata-att----------gcaa-aataa-a--
i Galagoides_demidoff.k141_1769638                      I 58 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               153534 141 +    324696 AT-TAT-AACA-A---A-ACA-C---TT-T-CCAGAT--GTAGT-T-TTAT--G-GC--AG-G----GT-GCATT-CTCAC-TCA-TT--TA-T--A--------TGT----------T-TTCTGCATT-TTCTGA----T-----T------------------CAAAATAT-T-TCACAATTGTAAAAGGGA-ACCAA--AATA-GAA----TAATA-ATT----------ACAA-AACAA-AAC
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    178736 145 -    189561 ATCTAT-AACA-A---A-ACA-CTT-TT-T-CCAGAT--TCAGC-T-TTGT--G-GC--AG-G----AT-GCATT-TTCAC-TTA-TC--TA-T--A--------TAT----------A-CCCTGCATT-TCCTGA----T-----A------------------CAAGATCT-TTTCACAATTCTAAAGGAGA-ACCAA--AATA-Gaa----caata-att----------acaa-aataa-aac
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                            9939 137 -     18683 ATCTGT-GATC-G---A-CTA-C---TT-T-CCAGAC--CTAAT-T-TTAT--G-GC--AG-A----GT-GCCTT-CTCAC-TCA-CT--TA-T--A--------GAT----------T-CTCTGCATT-CTCTGA----T-----T------------------CAAGAAAT-T-TCACAATTCTAGAGGATA-ACAAA--AATA-GAA----TAATA-ATT----------ATGA-AAC------
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               2416 142 -     14630 AACTAC-AACA-A---A-ACA-C---TT-T-CGAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GCATG-CTTAC-TCA-TT--TA-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAGTTCTAAAGGAAA-ACCAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119649515 142 - 195582420 AACTAC-AACA-A---A-ACA-C---TT-T-CGAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GCATG-CTTAC-TCA-TT--TA-T--A--------CAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAGTTCTAAAGGAAA-ACCAA--AATA-Gga----taata-att----------acaa-aacaa-aac
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   74537  75 +    118900 -------------------------------------------------------------------------------------------A-G--A--------GAT----------T-CTCTGCATT---TTGA----T-----T------------------CAAGAAAT-T-TCACA-TTCTAGAGGAGA-ACAAA--AATA-GGA----TAATA-ATT----------ATGC-AAC------
i Graphiurus_murinus.GraMur_scaffold_4493               I 55 C 0
s Hapalemur_alaotrensis.k141_1198205                         2828 141 +      3980 ATCTAC-AGCA-A---A-ACA-C---TT-T-CCAGAT--CTAGT-C-TTAT--G-GC--AG-G----GT-GCATT-CTCAC--TA-AT--TA-T--A--------TAG----------T-CTCTGCATT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAGGAAA-GCCAA--AATA-GAA----TAATA-ATT----------ACAA-AATAA-AAC
i Hapalemur_alaotrensis.k141_1198205                    C 0 I 20
s Hapalemur_gilberti.k141_97962                             25303 141 +     26611 ATCTAC-AACA-A---A-ACA-C---TT-T-CCAGAT--CTAGT-C-TTAT--G-GC--AG-G----GT-GCATT-CTCAC--TA-AT--TA-T--A--------TAG----------T-CTCTGCATT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAGGAAA-GCCAA--AATA-GAA----TAATA-ATT----------ACAA-AATAA-AAC
i Hapalemur_gilberti.k141_97962                         C 0 I 20
s Hapalemur_griseus.k141_1387522                             2765 141 +     56096 ATCTAC-AACA-A---A-ACA-C---TT-T-CCAGAT--CTAGT-C-TTAT--G-GC--AG-G----GT-GCATT-CTCAC--TA-AT--TA-T--A--------TAG----------T-CTCTGCATT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAGGAAA-GCCAA--AATA-GAA----TAATA-ATT----------ACAA-AATAA-AAC
i Hapalemur_griseus.k141_1387522                        C 0 I 20
s Hapalemur_meridionalis.k141_186231                        26040 141 -     42470 ATCTAC-AACA-A---A-ACA-C---TT-T-CCAGAT--CTAGT-C-TTAT--G-GC--AG-G----GT-GCATT-CTCAC--TA-AT--TA-T--A--------TAG----------T-CTCTGCATT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAGGAAA-GCCAA--AATA-GAA----TAATA-ATT----------ACAA-AATAA-AAC
i Hapalemur_meridionalis.k141_186231                    C 0 I 20
s Hapalemur_occidentalis.k141_797938                        42634 141 -     54384 ATCTAC-AATA-A---A-ACA-C---TT-T-CCAGAT--CTAGT-C-TTAT--G-GC--AG-G----GT-GCATT-CTCAC--TA-AT--TA-T--A--------TAG----------T-CTCTGCATT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAGGAAA-GCCAA--AATA-GAA----TAATA-ATT----------ACAA-AATAA-AAC
i Hapalemur_occidentalis.k141_797938                    C 0 I 20
s Helogale_parvula.HelPar_flattened_line_22962              14375  78 +     53719 -----------------------------------------------------------------------------------------------------------T----------T-CTCTGCTTT-TTTGGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAGGAGA-ACCAA--AATA-GAA----TAATA-ATT----------ACAA-AATAA-AAC
i Helogale_parvula.HelPar_flattened_line_22962          I 58 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                25234  84 -     91191 ATCTAT-AACA-A---A-ACA-CTT-TT-T-CCAGAT--TCAGC-T-TAAT--A-GC--AG-G----AT-GCATT-TTCAC-TCA-TT--TA-T--A--------TAT----------G-CTCTGCATT-TCCTGT----T----------------------------------------------------------------------------------------------------------
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 I 59
s Heterocephalus_glaber.JH602058.1                        2548398 137 +  31725842 ATATAT-AACA-A---A-ACa-t---tt-t-ccagtc--ctagt-t-ttag--G-AT--AG-C----AT-GTTTT-CTCac-tca-tt--ta-t--a--------tat----------c-ttctgcATT-CTTGGA----T-----T------------------CAAGATAT-T-TCCAAATTCTAAAGAAGT-ACCCA--AATA-GAG----TAATA-att----------acag-aac------
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               53794 130 +     73687 --------------------------TT-T-CCAGATTTCTAGT-T-TTAT--G-TC--AG-G----GT-GCATT-CTAAC-TCA-CT--TG-T--AAT------TTT----------T-TTCTGCCTT-TTCTGT----T-----T------------------CAAGATAA-T-CCACAATTTCAGAGAGAA-ACCAA--AATA-GAA----TAATA-ATT----------ACAA-AACAA-AAC
i Heterohyrax_brucei.HetBruBak_scaffold_25354           I 6 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              144795 144 +    277961 ATCTAT-AACA-A---A-ACA-ATT-TT-T-CCAGAC--TCAGT-T-TTAT--G-GC--AG-G----AT-GCATT-CTCAC-TCA-TT--TA-T--A--------CAT----------T-GACTGCATC-TTCTAA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAGGAGA-ACCAA--AATA-GAA----TAATA-ATT----------ACAA-AATAA-AAC
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      276126 139 -    477199 atctat-aaca-a---a-ata-t-tttc-t-ccagat--TCAGT-T-TTAT--G-GT--AG-G----AT-GCATT-CTCAC-TCA-TT--TA-T--A--------CAT----------T-C--TGCATT-T--TGT----T-----T------------------CAAGATCT-T-TAACAATTCTAAAGGAga-accaa--aata-gaa-----aata-att----------acaa-aataa-aac
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              5285 139 -      9143 ATCTAT-AACA-A---A-ATA-CTT-TC-T-CCAGAT--TCAGT-T-TTAT--G-GT--AG-G----AT-GCATT-CTCAC-TCA-TT--TA-T--A--------CAT----------T-C--TGCATT-T--TGT----T-----T------------------CAAGATCT-T-TAACAATTCTAAAGGACA-ACCAA--AACA-GAA-----AATA-ATT----------ACAA-AATAA-AAC
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                       306 152 -   7690867 AACTAC-AACA-A---A-ACA-C---TT-T-CGAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GCATG-CTTAC-TCA-TT--TA-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------CAAGATAT-T-CCACAATTCTAAGGGAAA-ACCAA--AATA-GGA----TAATA-ATTACAAAACAAAACAA-AACAA-AAC
i Hoolock_leuconedys.ctg79                                 C 0 I 137
s Hyaena_hyaena.HyaHya_flattened_line_20729                 13442  77 -     67322 -----------------------------------------------------------------------------------------------------------T----------T-CCTTGCATT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAGGAGA-ACCAA--AATA-GAA----TAATA-ATT----------ACA--AATAA-AGT
i Hyaena_hyaena.HyaHya_flattened_line_20729             I 58 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16355  81 -    119109 --------------------------------------------------------------------------------------TT--TA-T--A--------TAT----------C-TTCAGTATT-CATGAA----T-----G------------------CAGGATAT-T-TCCAAATTCTAAAGGAGA-AACCA--AATA-GAG----TAATA-ATT----------ACAA-AAC------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       I 53 C 0
s Hylobates_abbotti.k141_493872                              2233 142 +      5897 AACTAC-AACA-A---A-ACA-C---TT-T-TGAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GCATG-CTTAC-TCA-TT--TA-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_282275                               1445 142 +      1846 AACTAC-AACA-A---A-ACA-C---TT-T-TTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GCATG-CTTAC-TCA-TT--TA-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Hylobates_agilis.k141_282275                          C 0 I 62
s Hylobates_klossii.k141_584463                               609 142 -      1009 AACTAC-AACA-A---A-ACA-C---TT-T-TGAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GCATG-CTTAC-TCA-TT--TA-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Hylobates_klossii.k141_584463                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14621778 142 -  25970782 AACTAC-AACA-A---A-ACA-C---TT-T-CGAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GCATG-CTTAC-TCA-TT--TA-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1133650                            1667 142 -      2775 AACTAC-AACA-A---A-ACA-C---TT-T-TGAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GCATG-CTTAC-TCA-TT--TA-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             30270 142 -     60944 AACTAC-AACA-A---A-ACA-C---TT-T-CGAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GCATG-CTTAC-TCA-TT--TA-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     3429 137 +     22540 ATATAT-AGTA-A---A-GCA-C---TT-T-CCAGTC--CTAGT-T-TTAT--G-AC--AG-G----AT-CCTTT-CCCAC-TCA-TT--TA-T--G--------TAT----------T-CTCTGCATT-CTCAGA----T-----A------------------CAAGATAT-T-TCCAAATTCTAAAGGAGA-ACCCA--AATA-GAA----TAATA-ATT----------ACAA-AAC------
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7123369  73 +  13083262 ------------------------------------------------------------------------------------------------G--------TAT----------T----T----T-CTCCAA----T-----T------------------CAAGATAT-T-TCCCAATTCTAAGGGAGA-ACCAA--AATA-GAATgaataata-att----------acaa-aac------
i Ictidomys_tridecemlineatus.JH393315.1                 I 53 C 0
s Indri_indri.k141_1884019                                    499 142 -      2196 ATTTAT-AACA-A---A-ACA-C---TT-T-CCAGAT--CCAGT-C-TTAC--G-GC--AG-G----GT-GCATT-CTCAC-TCA-TT-T-A-T--A--------GAG----------T-CTCTGCATT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAGGAGA-GCCGA--AATA-GAA----TAATA-ATT----------ATAA-AATAA-AAC
i Indri_indri.k141_1884019                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               6549 141 +     17520 GTCTGT-AACA-A---A-ATA-AGT-TT-T-CCAGAT--TCGGT-T-CTAT--G-GC--AG-G----GT-GCATT-CTCAC-TCA-TT--TA-T--A--------TAT----------T-CTCTACATT-TTCTGA----C-----T------------------CAAGATAT-T-TCGTAATTCTAAAGGAGA-GCCAA--AATA-GAA----T---A-ATT----------ACAA-AATAA-AAC
i Inia_geoffrensis.IniGeo_flattened_line_66725          I 2 C 0
s Jaculus_jaculus.JH725517.1                              8562888  95 +  11848649 -------------------------------------------------------------------GT-GCacc-ctcat-tca-tt--ca-t--a--------tat----------t-ctcttcctt-ctctga----t-----t------------------ATAGATAT-T-TTAGCATTctaaagaaga-attaa--aata-gag----aaata-att----------ac-a-aac------
i Jaculus_jaculus.JH725517.1                            I 36 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               21380 140 +     37189 GTCTGT-AACA-A---A-ATA-CTT-TT-T-CCAGAT--TCAGT-T-TTAT--G-GC--AG-G----AT-GCATT-CTCAC-TCA-TT--TA-T--A--------TAT----------T-CTCTGCATT-TTCTGA----C-----T------------------CGAGACAC-T-TCACAATTC-AAAGGAGA-ACCAA--AATA-GAA----T---A-ATT----------ACAA-AATAA-AAA
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          47334  86 -    147782 --------------------------------------------------------------------------------------TT--TA-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------CAAGATAT-T-TTACAATTCTAAAGGAGA-AACAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Lagothrix_lagothricha.k141_12968                      I 52 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   111330 103 -    115756 -------------------------------------------------AT--G-AC--AG-G----AT-G-----CACTC-TCA-CT--TA-T--A--------TAT----------T-C--TGCATT-TTCTGA----T-----T------------------CAAGTTAC-T-TGTCAATTTTAAAAGAGA-AACAA--AATA-GAA----TAATG-ATT----------ACAA-AATAA-GAC
i Lasiurus_borealis.LasBor_scaffold_5102                I 30 C 0
s Lemur_catta.scaffold_1                                258404312 141 - 285822530 ATCTAC-AACA-A---A-ACA-C---TT-T-CCAGAT--CTAGT-C-TTAT--G-GC--AG-G----GT-GCATT-CTCAC--TA-AT--TA-T--A--------TAG----------T-CTCTGCATT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAGGAAA-GCCAA--AATA-GAA----TAATA-ATT----------ACAA-AATAA-AAC
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        21263  62 +     39228 ------------------------------------------------------------------------------------------------------------------------------------CTGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAG---A-GCCAA--AATA-GAA----TAATA-ATT----------ACAA-AATAA-AAC
i Lepilemur_ankaranensis.k141_884009                    I 58 C 0
s Lepilemur_dorsalis.k141_134267                            50636  62 +     63517 ------------------------------------------------------------------------------------------------------------------------------------CTGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAG---A-GCCAA--AATA-GAA----TAATA-ATT----------ACAA-AATAA-AAC
i Lepilemur_dorsalis.k141_134267                        I 58 C 0
s Lepilemur_ruficaudatus.k141_617879                        75799 142 +    116806 ATCTAT-AACA-A---A-ACA-C---TC-T-CCAGAT--GTAGT-C-TTAT--G-GC--AG-G----AT-GCATT-CTCAC-TCACTT---A-T--G--------TAG----------T-CTCTGCATT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAGAAGA-GCCAA--AATA-GAA----TAATA-ATT----------ACAA-AATAA-AAC
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     28901  62 -     33031 ------------------------------------------------------------------------------------------------------------------------------------CTGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAG---A-GCCAA--AATA-GAA----TAATA-ATT----------ACAA-AATAA-AAC
i Lepilemur_septentrionalis.k141_578524                 I 58 C 0
s Leptonychotes_weddellii.KB714749.1                      3083145  78 -   3498232 -----------------------------------------------------------------------------------------------------------t----------t-ctctgcaTT-TTCTGT----T-----T------------------CAAGATAT-T-TCACAATTCTGAAGGAGa-accaa--aata-gaa----taata-att----------acaa-aacaa-aac
i Leptonychotes_weddellii.KB714749.1                    I 58 C 0
s Lepus_americanus.LepAme_scaffold_62849                    10290 142 +     22452 ATCTAT-AACA-A---G-ACA-C---TT-T-CTAGAC--CCCGT-T-TAAA--G-GC--AG-G----GT-TATTT-CTCTC-TCG-TG--TA-T--A--------TAT----------T-CTTTCCCTT-TTCTGA----T-----T------------------TGAGAATG-T-TCACAATTCTAAAGGAGA-ACTGA--AATA-AAA----TAATA-ATT----------ACAA-TACAA-AAC
i Lepus_americanus.LepAme_scaffold_62849                C 0 I 26
s Lipotes_vexillifer.KE558548.1                            133717 141 +   3060487 GTCTGT-AACA-A---A-ATA-CGT-TT-T-CCAGAT--TCAGT-T-CTAT--G-GC--AG-G----AT-GCATT-CTCAC-TCA-TT--TA-T--A--------TAT----------T-CTCTGCATT-TTCTGA----C-----T------------------CGAGATAT-T-TCATAATTCTAAAGGAGA-ACCaa--aata-gaa----t---a-att----------acaa-aataa-aac
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19244910 142 +  19376315 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GTATT-CCTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            7946 140 +     84689 ATCTAT-AACA-A---A-ACA-T---TT-A-CCAGAT--CCAGT-T-TTAT--G-GC--AC-G----GG-GCATG-CTCAC-TCA-TT--TA-T--T--------TAT----------T-GTTTGCATT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAAGAAC-A--GA--AATA-GAA----TAATA-ATT----------GCAA-AATCA-AAG
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3775697 140 +   6799190 ATCTAT-AACA-A---A-ACA-T---TT-A-CCAGAT--CCAGT-T-TTAT--G-GC--AC-G----GG-GCATG-CTCAC-TCA-TT--TA-C--T--------TAT----------T-GTTTGCATT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAAGAAC-A--GA--AATA-GAA----TAATA-ATT----------GCAA-AATCA-AAG
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20588569 128 -  62548349 --------------------------TT-T-CCAGATTCTTAGC-T-TTAT--G-CC--AG-G----GT-GCCTT-CTGac-tca-tt--ta-t--a--------ttt----------t-ttctgcctt-ttctaa----T-----T------------------CAAGATAT-T-TCACAATTccaaagagaa-accaa--aata-gaa----taata-atc----------acaa-cacaa-aac
i Loxodonta_africana.GL010040.1                         I 5 C 0
s Lycaon_pictus.CM007556.1                               11084502  78 +  39895028 -----------------------------------------------------------------------------------------------------------T----------T-CTCTGCATT-TTCCGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAGGAGa-accaa--aata-gaa----taata-att----------acaa-aacaa-aac
i Lycaon_pictus.CM007556.1                              I 58 C 0
s Macaca_arctoides.k141_2201161                             16597 142 +     74745 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GC-GTATT-CTTAT-TCA-TT--TG-T--A--------TAT----------T-CTTTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGA----GAATA-ATT----------ACAA-AACAA-AAC
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12703103 142 +  12821369 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GC-GTATT-CTTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGA----GAATA-ATT----------ACAA-AACAA-AAC
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               5199 142 +      6569 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GC-GTATT-CTTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGA----GAATA-ATT----------ACAA-AACAA-AAC
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           43501 142 +     63263 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GC-GTATT-CTTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGA----GAATA-ATT----------ACAA-AACAA-AAC
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_1068107                               12077 142 +     12679 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GC-GTTTT-CTTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGA----GAATA-ATT----------ACAA-AACAA-AAC
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                1650 142 +      3017 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GC-GTATT-CTTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGA----GAATA-ATT----------ACAA-AACAA-AAC
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  43262 142 -     79256 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GC-GTATT-CTTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGA----GAATA-ATT----------ACAA-AACAA-AAC
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196032180 142 + 196197964 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GC-GTATT-Cttat-tca-tt--tg-t--a--------tat----------t-ctCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGA----gaata-att----------acaa-aacaa-aac
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11442286 142 +  11645122 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GC-GTATt-cttat-tca-tt--tg-t--a--------tat----------t-ctCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGA----gaata-att----------acaa-aacaa-aac
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   2209 142 -     46448 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GC-GTATT-CTTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGA----GAATA-ATT----------ACAA-AACAA-AAC
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                2040 142 -      3617 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GC-GTATT-CTTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGA----GAATA-ATT----------ACAA-AACAA-AAC
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 12372 142 -     55006 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GC-GTATT-CTTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGA----GAATA-ATT----------ACAA-AACAA-AAC
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43837409 142 +  43892939 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GC-GTATT-CTTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGA----GAATA-ATT----------ACAA-AACAA-AAC
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                4631 142 -      5978 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GC-GTATT-CTTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGA----GAATA-ATT----------ACAA-AACAA-AAC
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               2214 142 -     27140 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GC-GTATT-CTTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGA----GAATA-ATT----------ACAA-AACAA-AAC
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                699408  74 +    802869 ------------------------------------------------------------------------------------------------------------------------C--TGCATT-TTCTGT----T-----T------------------CAAGATAT-T-TAACAATTCTAAAGGAGA-ACTAA--AATA-GAA----TAATA-ATT----------ACAA-AATAA-AAC
i Macroglossus_sobrinus.MacSob_scaffold_879             I 67 C 0
s Mandrillus_leucophaeus.scaffold125                     43434070 142 -  43563597 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GTATT-CCTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-TCACAATTCTAACGGAAA-ACCAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4446896 142 -   4543643 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GTATT-CCTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-TCACAATTCTAACGGAAA-ACCAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            143846 122 +    252755 -----------------------------T-ACAGAT--TTGTA-T-ATAT--G-AA--GG-G----AT-GAACT-CTCAC-TCA-TC--TA-A--A--------TAT----------T-CTCTGCATT-TTCTGA----C-----T------------------CAAGATAT-T-TCACAATCCCAAAGGAGA-ACcaa--aata-gaa----taata-att----------at-a-aataa--ac
i Manis_javanica.JSZB01003966.1                         I 18 C 0
s Manis_pentadactyla.KN017078.1                             33920 123 +     58827 -----------------------------T-ACAGAT--TTGGA-T-ATAT--G-AA--GG-G----AT-GCACT-CTCAC-TCA-TC--TA-A--A--------TAT----------T-CTCTGCATT-TTCTGA----C-----T------------------CAAGATAT-T-TCACAATCCCAAAAGAGA-ACcaa--aata-gaa----taatt-att----------atga-aataa--ac
i Manis_pentadactyla.KN017078.1                         I 18 C 0
s Marmota_marmota.CZRN01000005.1                         36871209  73 +  64221397 ------------------------------------------------------------------------------------------------a--------tat----------t----t----t-ctccaa----t-----t------------------caaGATAT-T-TCCCAATTCTAAAGGAGA-ACCAA--AATA-GAATgaataata-att----------acaa-aac------
i Marmota_marmota.CZRN01000005.1                        I 53 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       62020  97 -    234502 ----------------------------------------------------------------------GTATT-CTCAC-TCA-TT--TA-T--A--------TGT----------T-C--TGCATT-TTCTGT----T-----T------------------CAAGATAT-T-TAACAATTATACAGGAGA-ACCAA--AATA-GAA----TAATA-ATT----------ACAG-AATAA-AAC
i Megaderma_lyra.MegLyr_scaffold_3562                   I 33 C 0
s Mellivora_capensis.MelCap_flattened_line_1828            226419  78 -    226874 -----------------------------------------------------------------------------------------------------------T----------T-CTCTGCATT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAATTCTGAAGGAGA-ACCAA--AATA-GAA----TAATA-ATT----------ACAA-AACAA-AAC
i Mellivora_capensis.MelCap_flattened_line_1828         I 59 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233                9335  62 +     15977 ----------------------------------------------------------------------------------------------------------------------------TACTC-CTCTGA----T-----T------------------CAAGAT-T-T-TTATAATTCTAAAGAAGA-AACAA--CATA-AAG----TAATA-ATT----------ACA-----------
i Meriones_unguiculatus.MerUng_scaffold_52233           I 48 C 0
s Mesocricetus_auratus.KB708139.1                         1044101  85 -  26018355 -------------------------------------------------------------------------tt-c---t-ttc-tt--ta-T--G--------TAT----------T-CCCTTTCTT-CTATGA----T-----T------------------CAAGTTAT-T-TGGTAAttctaaagaaga-aacaa-aaatg-aag----taata-att----------aca-----------
i Mesocricetus_auratus.KB708139.1                       I 34 C 0
s Mesoplodon_bidens.MesBid_scaffold_183284                   1417 141 +      2166 GTCTGT-AACA-A---A-ATA-CTT-TT-T-CCAGAT--TCAGT-T-TTAT--G-GC--AG-G----AT-GCATT-CTCAC-TCA-TT--TA-T--A--------TAT----------A-CTCTGCATT-TTCTGA----C-----T------------------CGAGATAT-T-TCACAATTCTAAAGGAGA-ACCAA--AATA-GAA----T---A-ATT----------ACAA-AATAA-AAC
i Mesoplodon_bidens.MesBid_scaffold_183284              C 0 C 0
s Microcebus_murinus.CM007691.1                          16507431 142 +  47401472 ATCTAT-AACA-A---G-ACA-C---TT-T-CCAGAT--CTAGC-C-TTAT--G-GC--AG-G----GT-GCATT-CTCAC-TTATTT---A-T--A--------TAG----------T-CTCTGCATT-GTGTGA----T-----T------------------CAAGATAT-T-TCACAATTctaaagaaga-accaa--aata-gaa----taata-att----------acaa-aacaa-aac
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  28732  80 -     48017 ATACAT-AAA--A---G-ATA-CAT-TT-T-CCAGATTTCTAGT-T-TTAT--G-CT--AG-T----AT-GAATT-CTGAC-TAC-TT--TA-T--A--------TCA----------T-TC----------TTGCTTCTT----------------------------------------------------------------------------------------------------------
i Microgale_talazaci.MicTal_scaffold_34660              C 0 I 78
s Micronycteris_hirsuta.MicHir_scaffold_37978               20386 159 -     32043 ATCTAT-AATA-A---A-ACA-CTT-TT-T-CCAGAT--TCAGT-TTTTAT--G-GC--AG-G----AT-GCA---CTCGC-TCA-TT--TA-T--G--------TAT----------T-C--TGCATC-TTCTGA----T-----TTCTAACAATTCTAAAAATGAAGATAT-T-TAGCAATTCTAAAAGAGA-GCCAA--AATA-GAA----TAATA-ATT----------ACAA-AACAA-AAC
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22817218  85 -  98408828 -------------------------------------------------------------------------tt-c---t-ttc-tt--tc-t--t--------tat----------t-cccttcctt-ccctta----t-----t------------------caagatat-t-ttataattctaaagaaga-aacaa-aaata-aag----taata-att----------acA-----------
i Microtus_ochrogaster.CM001673.1                       I 35 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8207159 143 +  10048721 ATctat-aaca-a---a-ata-c-tttt-t-CCAGAT--TCAGC-TTTTAT--T-GC--AG-GATGGAT-T-----CTCAC-TCA-TT--TA-T--A--------TAC----------T-C--TGCATT-TTCTGA----T-----T------------------CAAGATAT-T-TAGCAATTCGAAAGGAAG-actaa--aata-gaa----taata-att----------acaa-aataa-aag
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            31830 143 +     45743 ATCTAT-AACA-A---A-ATA-CTT-TT-T-CCAGGT--TCAGC-TTTTAT--T-GC--AG-GATGGAT-T-----CTCAC-TCA-TT--TA-T--A--------TAC----------T-C--TGCATT-TTCTGA----T-----T------------------CAAGATAT-T-TAGCAATTCGAAAGGAGG-ACTAA--AATA-GAA----TAATA-ATT----------ACAA-AATAA-AAC
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        32729 142 +     34273 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GTATT-CCTAT-TCG-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         8448  78 -    104932 -----------------------------------------------------------------------------------------------------------T----------T-CTCTGCATT-TTCTGT----T-----T------------------CAAGATAT-T-TCACAATTCTGAAGGAGA-ACCAA--AATA-GAA----TAATA-ATT----------ACAA-AACAA-AAC
i Mirounga_angustirostris.MirAng_flattened_line_8852    I 58 C 0
s Mirza_zaza.k141_226143                                     2836 142 +      8497 ATCTAT-AACA-A---G-ACA-C---TT-T-CCAGAT--CTAGC-C-TTAT--G-GC--AG-G----GT-GCATT-CTCAC-TCATTT---A-T--A--------TAG----------T-CTCTGCATT-GTCTGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAGAAGA-GCCAA--AATA-GAA----TAATA-ATT----------ACAA-AATAA-AAC
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 144144 141 +    154973 GTCTGT-AACA-A---A-ATA-CGT-TT-T-CCAGAT--TCAGT-T-TTAT--G-GC--AG-G----AT-GCATT-CTCAC-TCA-TT--TA-T--A--------TAT----------T-CTCTGCATT-TTCCGA----C-----T------------------CGAGATAT-T-TCGTAATTCTAAAGGAGA-ACCAA--AATA-GAA----T---A-ATT----------ACAA-AATAA-AAC
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                158974  84 +    265003 ----------------------------------------------------------------------------------TCA-TT--TA-T--A--------TAT----------T-C--TGCATT-TTCTGA----T-----T------------------CAAGATAT-T-TAACAACCCTGAAGGAGG-ACCAA--AATA-GAA----T---G-ATT----------ACAA-AATAA-AAC
i Mormoops_blainvillei.MorMeg_scaffold_2952             I 50 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 2322 145 -      4346 ATCTAT-AACA-A---G-ACA-CAT-TT-T-CCAGAT--TCAGC-T-TTAT--G-GC--AG-G----AT-GCATT-TTCAC-TCG-TT--TA-T--A--------TAT----------T-CTCTGCATT-TCCTGT----T-----A------------------CAAGATCT-TTTCACAATTCTAAAGGAGA-ACCAA--AATA-GAA----CAATA-ATT----------ACAA-AATAA-AAC
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  142070  78 -    168139 -----------------------------------------------------------------------------------------------------------T----------T-CTCTGCTTT-TTCGGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAGGAGA-ACCAA--AATA-GAA----TAATA-ATT----------ACAA-AATAA-AAC
i Mungos_mungo.MunMun_flattened_line_8729               I 58 C 0
s Murina_feae.MurFea_scaffold_2254                          16840 103 -    100666 -------------------------------------------------AT--A-GC--AG-G----AT-G-----CACTC-TCA-TT--TA-T--A--------TAT----------T-C--TGCATT-TTCTGA----T-----T------------------CAAGTTAT-T-TAGTAATTCTAAAAGAGA-AACAA--AATA-GAA----TAATT-ATT----------ACAA-AATAA-AAC
i Murina_feae.MurFea_scaffold_2254                      I 31 C 0
s Mus_caroli.LT608236.1                                  70763710  75 +  92629107 ---------------------------------------------------------------------------------------T--TA-T--T--------TAT----------T-CCCTCTCTT-CTATGA----T-----T------------------CAA-ATAT-C-TTATatttctagaaaaga-aacaa--aata-aag----tgata-att----------aga-----------
i Mus_caroli.LT608236.1                                 I 38 C 0
s Mus_musculus.chr16                                     75486772  76 +  98207768 ---------------------------------------------------------------------------------------T--TA-T--T--------TAT----------T-CCCTCTCTT-CTATGA----T-----T------------------CAAGATAT-C-GTATAAttctagaaaata-aacaa--aata-aag----tgata-att----------aga-----------
i Mus_musculus.chr16                                    I 38 C 0
s Mus_pahari.LT608305.1                                  67552934  76 +  89017189 ---------------------------------------------------------------------------------------T--TA-T--T--------TAC----------T-CCCTCTCTT-TTCTGA----T-----T------------------CAAGGTAT-C-TTATAattctagaaaaga-aacaa--aata-aag----tgata-att----------aga-----------
i Mus_pahari.LT608305.1                                 I 38 C 0
s Mus_spretus.CM004110.1                                 74327947  76 +  97876770 ---------------------------------------------------------------------------------------T--TA-T--T--------TAT----------T-CCCTCTCTT-CTATGA----T-----T------------------CAAGATAT-C-ATATAattctagaaaaga-aacaa--aata-aag----tgata-att----------aga-----------
i Mus_spretus.CM004110.1                                I 38 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              8498  81 +     98495 --------------------------------------------------------------------------------------CT--TA-A--A--------GAC----------T-CTCTGCATT-CTCTGA----T-----T------------------CAAGAAAT-T-TCACAAATCTAGAGGAGA-ACAAA--AATA-GAA----TAATA-ATT----------ATGA-AAT------
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 56 C 0
s Mustela_putorius.JH417978.1                             4421311  78 -  28371801 -----------------------------------------------------------------------------------------------------------T----------T-CTCTGCATT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAATTCTGAAGGAGa-accaa--aata-gaa----taata-att----------acaa-aacaa-aac
i Mustela_putorius.JH417978.1                           I 59 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     87383 135 -    117718 ATGTGT-AACA-A---A-GCG-C---TT-T-CTGGTT--CCATT-T-TTAG--G-AT--CG-G----GT-GCTT--CATCC-TCA-CT--CT-T--A--------CGT----------C-TTCTGCATT-TTTGGA----T-----A------------------GGGGCTAT-T-TCCAAATTCTAAAGGAGA-ATCCA---GCA-GAG----TAATA-ATT----------ATTA-AAC------
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               965166  75 +   8389877 -------------------------------------------------AT--G-GC--AG-G----AT-G-----CACTC-TCA-TT--TA-T--A--------TAT----------T-C--TGCATT-TTCTGA----T-----T------------------CAAGTAAT-T-TAGCAATTCtaaaagaga-aaca------------------------------------------------
i Myotis_brandtii.KE161952.1                            I 30 I 23
s Myotis_davidii.KB114863.1                               5016847 103 +   6462685 -------------------------------------------------AT--G-GC--AG-G----AT-G-----CACTC-TCA-TT--TA-T--A--------TAT----------T-C--TGCATT-TTCTGa----t-----t------------------caagttat-t-taaaaattctaaaagaga-aacaa--aata-gaa----taatt-att----------acaa-aataa-aac
i Myotis_davidii.KB114863.1                             I 30 C 0
s Myotis_lucifugus.GL429887.1                             3462752  75 -   3747815 -------------------------------------------------AT--G-GC--AG-G----AT-G-----CACTC-TCA-TT--TA-T--A--------TAT----------T-C--TGCATT-TTCTGA----T-----T------------------CAAGTTAT-T-TAGCAATTctaaaagaga-aaca------------------------------------------------
i Myotis_lucifugus.GL429887.1                           I 30 I 23
s Myotis_myotis.MyoMyo_scaffold_6123                         7940 103 +     66751 -------------------------------------------------GT--G-GC--AG-G----AT-G-----CACTC-TCA-TT--TA-T--A--------CAT----------T-C--TGCATT-TTATGA----T-----T------------------CAAGTTAT-T-TAGAAATTCTAAAAGAGA-AACAA--AATA-GAA----TAATT-ATT----------ACAA-AATAA-AAC
i Myotis_myotis.MyoMyo_scaffold_6123                    I 30 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             2782 144 -      8794 ATCCAT-AACA-A---A-ATA-ATT-TG-T-CCA--TTTCTAGT-T-TCAT--G-GC--CG-G----GT-GCATT-CTGAC-TCA-TT--TA-A--A--------TAT----------T-CTCTACACT-TTCTGA----T-----T------------------CAAGATAA-T-TCACAATTCTAAAGAAGA-ACCAA--AATA-GAA----TAATA-ATT----------ACAA-AACAA-AAC
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            107820  89 +    362372 -------------------------------------------------------------------------gt-c---t-ttc-tt--tttt--a--------tat----------t-ctcttcttt-cactaa----t-----t------------------aaagatat-t-ttatgattccaaaggaga-aacag--aata-aag----taata-att----------acaa-aac------
i Nannospalax_galili.KL201303.1                         I 219 C 0
s Nasalis_larvatus.k141_153429                               5108 142 +     48152 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GTATT-CTTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCGGA----T-----T------------------GAAGACAC-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGA----TAATA-ATT----------ACAA-AACAG-AAC
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4482048  78 -  14209539 -----------------------------------------------------------------------------------------------------------t----------t-ctctgcatT-TTCTGT----T-----T------------------CAAGATAT-T-TCACAATTCTGAAGAAGa-accaa--aata-gaa----taata-att----------acaa-aacaa-aac
i Neomonachus_schauinslandi.NINY01007774.1              I 58 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3948755 141 -   4490290 GTCTGT-AACA-A---A-ATA-CGT-TT-T-CCAGAT--TCAGT-T-TTAT--G-GC--AG-G----AT-GCATG-CTCAc-tca-tt--ta-t--a--------tat----------t-gtctgCATT-TTCTGA----C-----T------------------CGAGATAT-T-TCGTAATTCTAAAGGAGA-ACCaa--aata-gaa----t---a-att----------acaa-aataa-aac
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  47037 139 +     94413 ATCTAT-AACA-A---A-ATA-CCT-TT-T-TCAGAT--TCAGT-TTTCAT--A-GC--AG-G----AT-GCA---CTCAC-TCA-TT--TA-T--A--------TAT----------T-C--TACATT-TTCTGA----T-----T------------------CAAGATAT-T-TAACAATTCTAAAGGAGA-ACCAA--AATA-GAA----TAATA-ATT----------ACAA-AATAA-A--
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1223136                          10901 142 -     11253 AACTAC-AACA-A---A-ACA-C---TT-T-CGAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GCATG-CTTAC-TCA-TT--TA-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Nomascus_annamensis.k141_1223136                      C 0 I 141
s Nomascus_concolor.k141_49591                                203 142 +      2014 AACTAC-AACA-A---A-ACA-C---TT-T-CGAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GCACG-CTTAC-TCA-TT--TA-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Nomascus_concolor.k141_49591                          C 0 C 0
s Nomascus_gabriellae.k141_906566                            1533 142 -      2544 AACTAC-AACA-A---A-ACA-C---TT-T-CGAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GCATG-CTTAC-TCA-TT--TA-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             22007 142 -  18771707 AACTAC-AACA-A---A-ACA-C---TT-T-CGAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GCATG-CTTAC-TCA-TT--TA-T--A--------TAT----------TC-TCTGCAAT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Nomascus_siki_b.tarseq_80                         C 0 I 62
s Nomascus_siki_a.k141_844529                                  1282 142 +      2124 AACTAC-AACA-A---A-ACA-C---TT-T-CGAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GCATG-CTTAC-TCA-TT--TG-T--A--------TAT----------TC-TCTGCAAT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Nomascus_siki_a.k141_844529                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                27495  78 +   3668941 -----------------------------------------------------------------------------------------------------------T----------T-CTCTGCATT-TTCCGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAGGAGA-accaa--aata-gaa----taata-att----------acaa-aacaa-aac
i Nyctereutes_procyonoides.CAJHUB010000786.1            I 58 C 0
s Nycticebus_bengalensis.LG16                            65564352  82 -  95554990 ------------------------------------------------------------------------------------------TA-T--T--------TAT----------T-GTTTGCATT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAGGAAC-A--GA--AATA-GAA----TAATA-ATT----------GCAA-AATCA-AAG
i Nycticebus_bengalensis.LG16                           I 54 C 0
s Nycticebus_coucang.k141_2051882                            1197  82 +      6470 ------------------------------------------------------------------------------------------TA-T--T--------TAT----------T-GTTTGCATT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAGGAAC-A--GA--AATA-GAA----TAATA-ATT----------GCAA-AATCA-AAG
i Nycticebus_coucang.k141_2051882                       I 54 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65666667 137 +  89412551 ATCTAT-AACA-A---A-ACA-T---TT-A-CCAGAT--CCAGT-T-TTAT--G-GC--AT-G----GT-GCATG-CTCAT-TCA-TT--TA-T--T--------TAT----------T-GTTTGCATT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAAGAAC-A--GA--AATA-GAA----TAA----TT----------GCAA-AATCA-AAG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4993273 141 -  23139505 ATTTAT-AGTA-A---A-ACA-C---TT-T-CTAAAC--CCAGC-T-TAAA--G-AG--Ag-g----at-atttt-ctctc-tca-tt--ta-t--a--------TAT----------T-CTCTGC-TT-TTGAGA----T-----G------------------CAACATGA-T-TCACAATTCAAAGGGAAG-AGTGA--AATA-GAA----TAATA-att----------acaa-agcaa-aac
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Odobenus_rosmarus.KB229369.1                             676701  78 -   3126709 -----------------------------------------------------------------------------------------------------------t----------t-ctctgcaTT-TTCCGA----T-----T------------------CAAGATAT-T-TCACAATTCTGAAGGAGa-accaa--aata-gaa----taata-att----------acaa-aacaa-aac
i Odobenus_rosmarus.KB229369.1                          I 58 C 0
s Odocoileus_virginianus.KZ101650.1                       1077447 142 +   1425656 ATCTAT-AACA-A---A-ACA-CTT-TT-T-CCAGAT--TCAGC-T-TTAT--G-GC--AG-G----AT-GCATT-TTCAC-TCA-TT--TA-T--A--------TAT----------T-CTCTGCATT-TCCTGA----T-----A------------------CAAGATCT-TTTCACAATTCTAAAGGAGa-accaa--aata-gaa----caata-att----------acag----aa-aac
i Odocoileus_virginianus.KZ101650.1                     C 0 I 6
s Okapia_johnstoni.LVCL01S0017931.1                         34607 144 +     78940 ATCTAT-AACA-A---A-ACA-CTT-TT-T-CCAGAT--TCAGC-T-TTAT--G-GC--AG-G----AT-GCATT-TTCAC-TCA-TC--TA-T--A--------TAT----------A-CCCTGCATT-TCCTGA----T-----A------------------CAAGATCT-TTTCACAATTCTAAGGGAGA-ACCAA--AATA-Gaa----caata-att----------acaa-aataa--ac
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  122502  77 +    145789 ------------------------------------------------------------------------------------------TC-T--T--------TAT----------T-CCCTTTCTT-CTCTTA----T-----T------------------CAAGATTTTT-TTATAACTCTAAAGAAGA-AACAAA-AATA-AAG----TAATA-ATT----------ACA-----------
i Ondatra_zibethicus.OndZib_scaffold_6821               I 40 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  34247  82 +     62360 -------------------------------------------------------------------------TT-C---T-TGC-TT--TA-T--T--------AAT----------T-CCCTTT----CTCTGA----T-----T------------------CCAGATAT-T-TTATAATTCTAAAGAAGA-AACAAA-AATA-AAG----TAATA-ATT----------ACA-----------
i Onychomys_torridus.OnyTor_scaffold_12578              I 33 C 0
s Orcinus_orca.KB316965.1                                 7222442 140 -   7562323 GTCTGT-AACA-A---A-ATA-CGT-TT-T-CCAGAT--TCAGT-T-TTAT--G-GC--AG-G----AT-GCATT-CTCAC-TCA-TT--TA-T--a--------tat----------t-ctctgcatt-ttctgA----C-----T------------------CGAGATAT-T-TTGTAATTCTAAAGGAGA-ACCAA--AAta-gaa----t---a-att----------acaa-aataa--ac
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              40820 137 -     66828 ATCTAT-AACA-A---A-GTA-TGT-TT-T-CCAGATTTCTAGC-T-TTAT--G-TC--AG-A----GT-ACATT-CTGAC-TCA-TT--TA-T--A--------TCT----------T-TT----------CTGG----T-----T------------------CAAGCTAT-C-TCACAATTCTAAAGGGAA-ACTAA--AATA-GAA----TAACA-ATT----------ACAA-AACAA-AAC
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141872948 142 + 163896628 ATCTAT-AACA-A---G-ACA-C---TT-C-CTAGAC--CTAGT-T-TAAA--G-GC--AG-G----GT-TATTT-CTCTC-TCG-TG--TA-t--a--------tat----------t-ctttccatt-ttctga----t-----t------------------tGAGATTG-T-TCGCAATTCTAAAGgaga-actga--aata-aaa----taata-att----------acaa-gacaa-aac
i Oryctolagus_cuniculus.CM000803.1                      C 0 I 26
s Otocyon_megalotis.JAEUCK010005121.1                      304834  78 -    505867 -----------------------------------------------------------------------------------------------------------T----------T-CTCTGCATT-TTCCGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAGGAGA-accaa--aata-gaa----taata-att----------acaa-aacaa-aac
i Otocyon_megalotis.JAEUCK010005121.1                   I 58 C 0
s Otolemur_crassicaudatus.k141_321880                       36354  79 +     38679 ----------------------------------------------------------------------------------------------------------AT----------T-GTTTACATT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAATTCTaaaagaaa-accga--aata-gaa----taata-att----------gcaa-aataa-aag
i Otolemur_crassicaudatus.k141_321880                   I 58 C 0
s Otolemur_garnettii.GL873528.1                          18005795  79 -  38779656 ----------------------------------------------------------------------------------------------------------at----------t-gtttacatt-ttctga----t-----t------------------CAAGATAT-T-TCacaattctaaaagaaa-actga--aata-gaa----taata-att----------gcaa-aataa-aag
i Otolemur_garnettii.GL873528.1                         I 58 C 0
s Ovis_aries.CM001582.2                                 134075027  84 - 275406953 ATCTAT-AACA-A---A-ACA-CTT-TT-T-CCAGAT--TCAGC-T-TAAT--A-GC--AG-G----AT-GCATT-TTCAC-TCA-TT--TA-T--A--------TAT----------G-CTCTGCATT-TCCTGT----T----------------------------------------------------------------------------------------------------------
i Ovis_aries.CM001582.2                                 C 0 I 59
s Ovis_canadensis.OviCan_scaffold_6251                      76241  84 +    140051 ATCTAT-AACA-A---A-ACA-CTT-TT-T-CCAGAT--TCAGC-T-TAAT--A-GC--AG-G----AT-GCATT-TTCAC-TCA-TT--TA-T--A--------TAT----------G-CTCTGCATT-TCCTGT----T----------------------------------------------------------------------------------------------------------
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 I 59
s Pan_paniscus.CM003386.1                               127571760 142 - 205426864 AACTAC-AACA-A---A-ACA-C---TT-T-CGAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GCATG-CTTAC-TCA-TT--TA-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-Gga----taata-att----------acaa-aacaa-aac
i Pan_paniscus.CM003386.1                               C 0 I 26
s Pan_troglodytes.CM009241.2                            120148913 142 - 196562556 AACTAC-AACA-A---A-ACA-C---TT-T-CGAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GCATG-CTTAC-TCA-TT--TA-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-Gga----taata-att----------acaa-aacaa-aac
i Pan_troglodytes.CM009241.2                            C 0 I 62
s Panthera_onca.PanOnc_flattened_line_1615                  31529  78 +    295523 -----------------------------------------------------------------------------------------------------------T----------T-CTCTGCATT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAGTTCTAAAGGAGA-ACCAA--AATA-GAA----TAATA-ATT----------ACAA-AATAA-AAC
i Panthera_onca.PanOnc_flattened_line_1615              I 58 C 0
s Panthera_pardus.KV860323.1                              3635130  78 +  18214204 -----------------------------------------------------------------------------------------------------------t----------t-ctctgcatT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAGTTCTAAAGGAGA-accaa--aata-gaa----taata-att----------acaa-aataa-aac
i Panthera_pardus.KV860323.1                            I 58 C 0
s Panthera_tigris.KE721879.1                              5024911  78 -   6340057 -----------------------------------------------------------------------------------------------------------t----------t-ctctgcatT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAGTTCTAAAGGAGA-accaa--aata-gaa----taata-att----------acaa-aataa-aac
i Panthera_tigris.KE721879.1                            I 58 C 0
s Pantholops_hodgsonii.KE114631.1                         1063898 133 -   1292953 ------------------ACA-CTT-TT-T-CCAGAT--TCAGC-T-TAAT--A-GA--AG-G----AT-GCATT-TTCAC-TCA-TT--TA-T--A--------TAT----------G-CTCTGCATT-TCCTGT----T-----A------------------CAAGATCT-TTTCACAATTCTAAAGGAGA-ACCAA--AATA-Gaa----caata-att----------acaa-aataa-aac
i Pantholops_hodgsonii.KE114631.1                       I 10 C 0
s Papio_anubis.CM001492.2                               188152854 142 - 188283584 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GTATT-CCTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGa----taata-att----------acaa-aacaa-aac
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            49066 142 +     76494 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GTATT-CCTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47510251 142 +  47705337 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GTATT-CCTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 64233 137 -    104429 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GTATT-CCTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGA----TAATA-ATT----------ACAA-AA------C
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  14019 142 -     29451 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GTATT-CCTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                34422 142 +     35859 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GTATT-CCTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    112788  58 -    135482 ATCTAA-AACA-A---A-ATA-CTT-TT-T-CAAGAT--TCAGT-T-TTAT--G-AT--AG-G----AT-CCATT-CTCTC-TCA------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 I 63
s Perodicticus_ibeanus.k141_117958                           2342 142 -     23713 ATCTAT-AACA-A---A-ACA-T---TT-T-CCAGAT--CTAGT-T-TTAC--G-GC--AT-G----GT-GCATT-CTCAC-TCA-TT--TT-T--T--------TAT----------T-GTTTACATT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAAGAGA-ACTGA--AATA-GAA----TAATA-ATT----------GCAA-AATAA-AAG
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            21640 142 -     27972 ATCTAT-AACA-A---A-ACA-T---TT-T-CCAGAT--CTAGT-T-TTAT--G-GC--AT-G----GT-GCATT-CTCAC-TCA-TT--TT-T--T--------TAT----------T-GTTTACATT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAAGAGA-ACTGA--AATA-GAA----TAATA-ATT----------GCAA-AATAA-AAG
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      40243 134 -     45160 ATCTAT-CACT-A---A-ATA-C---TT-T-GCAGAC--ATAGT-T-TTAT--G-AC--AG-G----AT-ATATC-CTCAC-TCA-CT--TA-A--A--------TTT----------T-CTCCACGTT-CT-TGA----T-----T------------------TTA--TTC-T-TTACAATTCTAAAGGAAA-ACGAA--AATA-GAA----GAATA-ATT----------ACAA-AAC------
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4947422  85 -   8017169 -------------------------------------------------------------------------tt-c---t-ttc-tt--ta-t--t--------tat----------t-ccctttctt-ctctga----t-----t------------------ccagatat-t-ttataattctaaagaaga-aacaa-aaata-aag----taata-att----------aca-----------
i Peromyscus_maniculatus.KI615518.1                     I 33 C 0
s Petromus_typicus.PetTyp_scaffold_33007                     9582 101 -     36578 -------------------------------------------------------AC--AG-G----GT-GCTTT-CTCAC-TTA-CT--TA-T--A--------TAT----------C-CTCTGTATT-ATTGGG----C-----T------------------TAAGATAT-T-TCCAAATACTAAAGAAGG-ACCAA--ACTA-GAG----TAATA-ATT----------ATAA-AAC------
i Petromus_typicus.PetTyp_scaffold_33007                I 34 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            119057 141 -    122454 GTCTGT-AACA-A---A-ATA-CGT-TT-T-CCAGAT--TCAGT-T-TTAT--G-GC--AG-G----AT-GCATG-CTCAC-TCA-TT--TA-T--A--------TAT----------T-GTCTGCATT-TTCTGA----C-----T------------------CGAGATAT-T-TCGTAATTCTAAAGGAGA-ACCAA--AATA-GAA----T---A-ATT----------ACAA-AATAA-AAC
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           2112 142 -      3310 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GTATT-CTTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-TCACGATTCTAAAGGAAA-ACCAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       22018 141 -     82327 AACTAC-AACA-A---A-ACA-C---TT-T-CTA-AT--CTAGT-T-TGAT--T-GC--AG-A----GT-GTATT-CTTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-TCACGATTCTAAAGGAAA-ACCCA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           18770 136 +     19957 AACTAC-AACA-A---A-ACA-C---TT-T-CTA-AT--CTAGT-T-TGAT--T-GC--AG-A----GT-GTATT-CTTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-TCACGATTCTAAAGGAAA-ACCCA--AATA-GGA----TAATA-ATT----------ACAA-AA------C
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26736779 141 +  26888534 AACTAC-AACA-A---A-ACA-C---TT-T-CTA-AT--CTAGT-T-TGAT--T-GC--AG-A----GT-GTATt-cttat-tca-tt--tg-t--a--------tat----------t-ctCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-TCACGATTCTAAAGGAAA-ACCCA--AATA-Gga----taata-att----------acaa-aacaa-aac
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            93979  58 +    112873 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------AAATTAT-T-TGGCAATTCTAAAAGAGA-AACAA--AATA-GAA----TAATT-ATT----------ACAA-AATAA-AAC
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        I 71 C 0
s Pithecia_albicans.k141_991845                             40760 142 -     61926 AACTAT-AACA-A---A-ACA-C---TT-T-CTAGAT--CCAGT-T-TGAT--T-GC--AG-A----GT-GCTTT-CTTAC-TTA-TT--TA-C--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------CAAGATAT-T-TTACAATTCTAAAGGAGA-AACAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        22189 142 +     78826 AACTAT-AACA-A---A-ACA-C---TT-T-CTAGAT--CCAGT-T-TGAT--T-GC--AG-A----GT-GCTTT-CTTAC-TTA-TT--TA-C--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------CAAGATAT-T-TTACAATTCTAAAGGAGa-aacaa--aata-gga----taata-att----------acaa-aacaa-aac
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              6140 142 -     15800 AACTAT-AACA-A---A-ACA-C---TT-T-CTAGAT--CCAGT-T-TGAT--T-GC--AG-A----GT-GCTTT-CTTAC-TTA-TT--TA-C--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------CAAGATAT-T-TTACAATTCTAAAGGAGA-AACAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                         9338 142 -     16101 AACTAT-AACA-A---A-ACA-C---TT-T-CTAGAT--CCAGT-T-TGAT--T-GC--AG-A----GT-GCTTT-CTTAC-TTA-TT--TA-C--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------CAAGATAT-T-TTACAATTCTAAAGGAGA-AACAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          2647 142 +      9673 AACTAT-AACA-A---A-ACA-C---TT-T-CTAGAT--CCAGT-T-TGAT--T-GC--AG-A----GT-GCTTT-CTTAC-TTA-TT--TA-C--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------CAAGATAT-T-TTACAATTCTAAAGGAGa-aacaa--aata-gga----taata-att----------acaa-aacaa-aac
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13471641 142 -  19735023 AACTAT-AACA-A---A-ACA-C---TT-T-CTAGAT--CCAGT-T-TGAT--T-GC--AG-A----AT-GCTTT-CTTAC-TTA-TT--TA-C--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------CAAGATAT-T-TTACAATTCTAAAGGAGA-AACAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           10549 142 -     31692 AACTAT-AACA-A---A-ACA-C---TT-T-CTAGAT--CCAGT-T-TGAT--T-GC--AG-A----GT-GCTTT-CTTAC-TTA-TT--TA-C--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------CAAGATAT-T-TTACAATTCTAAAGGAGA-AACAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           3127 139 +     21690 GTCTGT-AACA-A---A-ATA-CTT-TT-T-CCAGAT--TCAGT-T-TTAT--G-GC--AG-C----AT-GCA---CTCAC-TCA-TT--TA-T--A--------TAT----------T-CTCTGCATT-TTCTGA----C-----T------------------CGAGATAT-T-TCACAATTCTAAAGGAGA-ACCAA--AATA-GAA----T---A-ATT----------TCAA-AATAA-AAC
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       19986 142 +     44506 AACTAT-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GCATT-CTTAC-TTA-TT--TA-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------CAAGATAT-T-TTACAATTCTAAAGGAGa-aacaa--aata-gga----taata-att----------acaa-aacaa-aac
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        20196 142 +     67491 AACTAT-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GCATT-CTTAC-TTA-TT--TA-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------CAAGATAT-T-TTACAATTCTAAAGGAGa-aacaa--aata-gga----taata-att----------acaa-aacaa-aac
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      10489  90 -     98129 --------------------------------------------------------------------------------C-TTA-TT--TA-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------CAAGATAT-T-TTACAATTCTAAAGGAGA-AACAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Plecturocebus_caligatus.k141_2539816                  I 48 C 0
s Plecturocebus_cinerascens.k141_744510                     20042 142 +    147771 AACTAT-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GCATT-CTTAC-TTA-TT--TA-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------CAAGATAT-T-TTACAATTCTAAAGGAGa-aacaa--aata-gga----taata-att----------acaa-aacaa-aac
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        20292 142 -     23762 AACTAT-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GCATT-CTTAC-TTA-TT--TA-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------CAAGATAT-T-TTACAATTCTAAAGGAGA-AACAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                           758 142 -     55515 AACTAT-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GCATT-CTTAC-TTA-TT--TA-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------CAAGATAT-T-TTACAATTCTAAAGGAGA-AACAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         20111 142 +    152463 AACTAT-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GCATT-CTTAC-TTA-TT--TA-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------CAAGATAT-T-TTACAATTCTAAAGGAGa-aacaa--aata-gga----taata-att----------acaa-aacaa-aac
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      6871 142 +      8943 AACTAT-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GCATT-CTTAC-TTA-TT--TA-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------CAAGATAT-T-TTACAATTCTAAAGGAGa-aacaa--aata-gga----taata-att----------acaa-aacaa-aac
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                          9831 142 +    134592 AACTAT-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GCATT-CTTAC-TTA-TT--TA-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------CAAGATAT-T-TTACAATTCTAAAGGAGa-aacaa--aata-gga----taata-att----------acaa-aacaa-aac
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          20421 142 -     75465 AACTAT-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GCATT-CTTAC-TTA-TT--TA-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------CAAGATAT-T-TTACAATTCTAAAGGAGA-AACAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              184304 142 -    373494 AACTAC-AACA-A---A-ACA-C---TT-T-CGAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GCATG-CTTAC-TCA-TT--TA-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGa----taata-att----------acaa-aacaa-aac
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19804211 142 +  19899266 AACTAC-AACA-A---A-ACA-C---TT-T-CGAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GCATG-CTTAC-TCA-TT--TA-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               2350 142 -     15069 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GTATT-CTTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-TCACAATTCTAAAGGAAA-ACTAA--AATA-GGA----TAATA-ATT----------AGAA-AACAA-AAC
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              2484 142 +     14865 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GTATT-CTTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGA----TAATA-ATT----------AGAA-AACAA-AAC
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                73657 130 +     78963 --------------------------TT-T-CCAGATTTCTAGT-T-TTAT--G-TC--AG-G----GT-GCATT-CTAAC-TCA-CT--TG-T--AAT------TTT----------T-TTCTGCCTT-TTCTGT----T-----T------------------CAAGATAA-T-CCACAATTTCAGAGAGAA-ACCAA--AATA-GAA----TAATA-ATT----------ACAA-AACAA-AAC
i Procavia_capensis.ProCapCap_scaffold_15315            I 6 C 0
s Prolemur_simus.MPIZ01000048.1                           6845687 141 +  12164890 ATCTAC-AACA-A---A-ACA-C---TT-T-CCAGAT--CTAGT-C-TTAT--G-GC--AG-G----GT-GCATT-CTCAC--TA-AT--TA-T--A--------TAG----------T-GTCTGCATT-TTCTGA----T-----T------------------GAAGATAT-T-TCACAATTCTAAAGGAAA-Gccaa--aata-gaa----taata-att----------acaa-aataa-aac
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    664304 142 -   2312742 NNNNNN-NNNN-N---N-NNN-N---NN-N-NNNNNN--NNNNN-N-NNNN--N-NN--NN-N----NN-NNNNN-NNNNNNNNN-NN---N-N--N--------NNN----------N-NNNNNNNNN-NNNNNN----N-----N------------------NNNNNNNN-N-NNNNNNNNNNNNNNNNNN-NNNNN--NNNN-NNN----NNNNN-NNN----------NNNN-NNNNN-NNN
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                          832 142 +     11805 ATTTAT-AACA-A---A-ACA-C---TT-T-CCAGAT--CTAGT-C-TTAT--G-GC--AG-G----GT-GCATT-CTCACTCAT-TT---A-T--A--------TAG----------T-CTCTGCATT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAGGAGA-GCCaa--aata-gaa----taata-att----------ataa-aataa-aac
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           40168 141 +     52369 ATTTAT-AACA-A---A-ACA-C---TT-T-CCAGAT--CTAGT-C-TTAT--G-GC--AG-G----GT-GCATT-CTCAT-CAT-TT---A-T--A--------TAG----------T-CTCTGCATT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAGGAGA-GCCaa--aata-gaa----taata-att----------ataa-aataa-aac
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         32556 141 -     44753 ATTTAT-AACA-A---A-ACA-C---TT-T-CCAGAT--CTAGT-C-TTAT--G-GC--AG-G----GT-GCATT-CTCAT-CAT-TT---A-T--A--------TAG----------T-CTCTGCATT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAGGAGA-GCCAA--AATA-GAA----TAATA-ATT----------ATAA-AATAA-AAC
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            14477 141 +     27322 ATTTAT-AACA-A---A-ACA-C---TT-T-CCAGAT--CTAGT-C-TTAT--G-GC--AG-G----GT-GCATT-CTCAT-CAT-TT---A-T--A--------TAG----------T-CTCTGCATT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAGGAGA-GCCaa--aata-gaa----taata-att----------ataa-aataa-aac
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       14116 142 -     53241 ATTTAT-AACA-A---A-ACA-C---TT-T-CCAGAT--CTAGT-C-TTAT--G-GC--AG-G----GT-GCATT-CTCACTCAT-TT---A-T--A--------TAG----------T-CTCTGCATT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAGGAGA-GCCAA--AATA-GAA----TAATA-ATT----------ATAA-AATAA-AAC
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         36388 142 -     48185 ATTTAT-AACA-A---A-ACA-C---TT-T-CCAGAT--CTAGT-C-TTAT--G-GC--AG-G----GT-GCATT-CTCACTCAT-TT---A-T--G--------TAG----------T-CTCCGCATT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAGGAGA-GCCAA--AATA-GAA----TAATA-ATT----------ATAA-AATAA-AAC
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           30875  62 +     77221 ----------------------------------------------------------------------------------------------------------------------------TACTC-TTCTGA----T-----T------------------CAAGAT-T-T-TTATAATTCTAAAGAAGA-AACTA--CATA-AAG----TAATA-ATt----------aca-----------
i Psammomys_obesus.NESX01026517.1                       I 50 C 0
s Pteronotus_parnellii.KE867983.1                            1586 138 -     27784 ATCTGT-AACA-A---A-ATA-CTT-TT-T-CCAGAT--TCAGT-TTTTAT--G-GC--AG-G----AT-GCA---CTCAC-TCA-TT--TA-t--a--------tat----------t-c--tgcatttttctga----t-----t------------------caagatat-t-ta----ttctaaaagaga-accaa--aata-gaa----taata-att----------acaa-aataa-aac
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        243404  78 -    344369 -----------------------------------------------------------------------------------------------------------T----------T-CTCTGCATT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAATTCTGAAGGAGA-ACCAA--AATA-GAA----CAATA-ATT----------ACAA-AACAA-AAC
i Pteronura_brasiliensis.PteBra_flattened_line_1343     I 59 C 0
s Pteropus_alecto.KB031157.1                             13243778  74 -  17261082 ------------------------------------------------------------------------------------------------------------------------c--tgcATT-TTCTGT----T-----T------------------CAAGATAT-T-TAACAAGTCTAAAGGAGA-accaa--aata-gaa----taata-att----------aaaa-aataa-aac
i Pteropus_alecto.KB031157.1                            I 67 C 0
s Pteropus_vampyrus.KN525959.1                             601731  74 -   3946241 ------------------------------------------------------------------------------------------------------------------------c--tgcATT-TTCTGT----T-----T------------------CAAGATAT-T-TAACAAGTCTAAAGGAGA-accaa--aata-gaa----taata-att----------aaaa-aataa-aac
i Pteropus_vampyrus.KN525959.1                          I 67 C 0
s Puma_concolor.QAVW01000427.1                          131531493  78 - 161321710 -----------------------------------------------------------------------------------------------------------t----------t-ctctgcatT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAGTTCTAAAGGAGA-accaa--aata-gaa----taata-att----------acaa-aataa-aac
i Puma_concolor.QAVW01000427.1                          I 58 C 0
s Pygathrix_cinerea.k141_374971                             26475 142 +     56732 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GTATT-CTTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6802966 142 +   6970761 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GTATT-CTTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             2359 142 +     18040 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GTATT-CTTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                13531 142 +     68503 ATCTAT-AACA-A---A-ACA-CTT-TT-T-CCAGAT--TCAGC-T-TTAT--G-GC--AG-G----AT-GCATT-TTCAC-TCA-TT--TA-T--A--------TAT----------T-CTCTGCATT-TCCTGA----T-----A------------------CAAGATCT-TTTCACAATTCTAAAGGAGA-ACCAA--AATA-GAA----CAATA-ATT----------ACAG----AA-AAC
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13912846  62 +  90463843 -------------------------------------------------------------------------------------------------------------------------cctctctt-ccctga----c-----t------------------caagatat-t-ttataattctaaaaagga-----a--aata-aag----tgata-att----------ata-----------
i Rattus_norvegicus.chr11                               I 43 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1785517 141 +   2252614 atctat-aaat-a---a-ata-c-tttt-t-ccaGAT--TCAGT-T-TTAT--G-AC--AG-G----AT-GCATT-CTCAC-TCA-TT--TA-T--A--------TAT----------T-C--TGCATT-TCCTGT----T-----T------------------CAAGATAT-T-TAACAATTCTAAAGGaga-accaa--aata-gaa-----aata-atc----------acaa-aataa-aac
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           12912 142 -     14454 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GTATT-CTTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206374238 142 - 206558726 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GTATT-CTTAT-TCG-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGa----taata-att----------acaa-aacaa-aac
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44851886 142 -  45163003 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GTATT-CTTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                17080  74 +    109198 ------------------------------------------------------------------------------------------------------------------------C--TGCATT-TTCTGT----T-----T------------------CAAGATAT-T-TAACAATTCTAAAGAAGA-ACAAA--AATA-GAA----TAATA-ATT----------ACAA-AATAA-AAC
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            I 67 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       5335 144 +     12214 ATCTAT-AACA-A---A-ACA-CTT-TT-T-CCAGAT--TCAGC-T-TAAT--G-GC--AG-G----AT-GCATT-TTCAC-TCA-TT--TA-T--A--------TAT----------G-CTCTGCATT-TCCTGT----T-----A------------------CAAGATCT-TTTCACAATTCTAAAAGAGA-ACCAA--AATA-GAA----CAATA--TT----------ACAA-AATAA-AAC
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15669874 142 -  43202129 AACTAT-AATA-A---A-ACA-C---TT-T-CTCGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GCAtt-cttac-tta-tt--ta-t--a--------tat----------t-ctctGCAAT-TTCTGA----T-----T------------------CAAGATAT-T-TTACAAttctgaaggaga-aacaa--aata-gga----taata-att----------acaa-aacaa-aac
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        1741 142 +     34089 AACTAT-AATA-A---A-ACA-C---TT-T-CTCGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GCATT-CTTAC-TTA-TT--TA-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------CAAGATAT-T-TTACAATTCTGAAGGAGa-aacaa--aata-gga----taata-att----------acaa-aacaa-aac
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              1682 142 -     60842 AACTAT-AATA-A---A-ACA-C---TT-T-CTCGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GCATT-CTTAC-TTA-TT--TA-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------CAAGATAT-T-TTACAATTCTGAAGGAGA-AACAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              1777 142 +     67014 AACTAT-AATA-A---A-ACA-C---TT-T-CTCGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GCATT-CTTAC-TTA-TT--TA-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------CAAGATAT-T-TTACAATTCTGAAGGAGa-aacaa--aata-gga----taata-att----------acaa-aacaa-aac
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              1755 142 +     60816 AACTAT-AATA-A---A-ACA-C---TT-T-CTCGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GCATT-CTTAC-TTA-TT--TA-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------CAAGATAT-T-TTACAATTCTGAAGGAGa-aacaa--aata-gga----taata-att----------acaa-aacaa-aac
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 1692 142 -     76454 AACTAT-AATA-A---A-ACA-C---TT-T-CTCGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GCATT-CTTAC-TTA-TT--TA-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------CAAGATAT-T-TTACAATTCTGAAGGAGA-AACAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17338203 142 -  30362882 AACTAT-AGCA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GCATT-CTTAC-TTA-TT--TA-T--A--------TAT----------T-CTCTGCAAT-TTCTGG----T-----T------------------CAAGATAT-T-TTACAATTCTAAAGGAGA-AACAA--AATA-GGA----CAATA-ATT----------ACAA-AACAA-AAC
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         17802 142 -     62485 AACTAT-AGCA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GCATT-CTTAC-TTA-TT--TA-T--A--------TAT----------T-CTCTGCAAT-TTCTGG----T-----T------------------CAAGATAT-T-TTACAATTCTAAAGGAGA-AACAA--AATA-GGA----CAATA-ATT----------ACAA-AACAA-AAC
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   29090 145 -    114521 ATCTAT-AACA-A---A-ATA-ATT-TT-T-TCCAGT--TCAGT-T-TTAA--G-GT--AG-A----AT-GTATT-CTCAC-TCA-CTCACA-T--A--------TAT----------T-CTCTGTATT--TCAGA----T-----C------------------CAAGATAT-T-CCACAATTCTAAATGAGA-ACCAA--AATA-GAA----TAATA-ATT----------ACAA-AATAA-AAC
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1527475                       24900 142 +     26421 AACTAC-AACA-A---A-ACA-C---TT-T-CTGGAT--CCAGT-T-TGAT--T-GC--AG-A----GT-CCATT-CTTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       5360 142 +     20762 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-TC--AG-A----GT-GCATT-CTTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         39095 142 +     40653 AACTAC-AACA-A---A-ACA-C---TT-T-CTGGAT--CCAGT-T-TGAT--T-GC--AG-A----GT-CCATT-CTTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                            9652 142 -     12194 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-TC--AG-A----GT-GCATT-CTTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     23074 142 -     27512 AACTAC-AACA-A---A-ACA-C---TT-T-CTGGAT--CCAGT-T-TGAT--T-GC--AG-A----GT-CCATT-CTTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         32093 142 -     33692 AACTAC-AACA-A---A-ACA-C---TT-T-CTGGAT--CCAGT-T-TGAT--T-GC--AG-A----GT-CCATT-CTTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   97043  86 -    120886 -------------------------------------------------------------------------TT-C---T-TTA-TT--TA-T--T--------TAT----------T-CCCCTTTTC-TCCTGA----T-----T------------------CAAGATAT-T-TTATAATTCTGAAGAAGA-AACAAA-AACAAAAG----TTACA-ATT----------ACA-----------
i Sigmodon_hispidus.SigHis_scaffold_11332               I 34 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            15733 144 +    739146 AACTAT-AATA-A---A-ATA-GTT-TT-T-CCAGAT--ACAGT-T-TTAT--G-GT--AA-A----AT-GCATC-CTCAT-TCA-TT--TA-T--A--------TTT----------T-CTCTACATT-TTCTGA----C-----T------------------CAAGATAT-C-TCACAATACTAAATGAGG-ACCAA--AATA-GAA----TAATA-ATT----------ACAA-ATTTA-AAC
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17747941 140 -  27805282 ACCTAT-ACCA-A---G-ATATATTTTT-G-GCTGAT--ACAAT-T-TTAT--A-AA--GG-A----AC-ATATT-TCCAC-TCA-TT--TA-T--A--------TAT----------T-ACTCACATT-ATATG-----T-----T------------------CAATATAT-T-TCACAATTGTAAGCAAGA-ACTGC--Aaaa-g--------at--att----------ataa-aatta-aac
i Sorex_araneus.JH798170.1                              C 0 I 2
s Spermophilus_dauricus.KZ294190.1                        2237285  73 +   2842873 ------------------------------------------------------------------------------------------------a--------tat----------t----t----t-ctccaa----t-----t------------------caatATAT-T-TCCCAATTCTAAAGGAGA-ACCAA--AATA-GAATgaataata-att----------acaa-aac------
i Spermophilus_dauricus.KZ294190.1                      I 53 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             232171  78 -    276980 -----------------------------------------------------------------------------------------------------------T----------T-CTCTGCATT-TTCTAA----T-----T------------------CAAGCTAT-T-TCACAATTCTGAAGGGGA-ACCAA--AATA-GAA----TAATA-ATT----------ACAA-AACAA-AGC
i Spilogale_gracilis.SpiGra_flattened_line_905          I 58 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            24734  78 +     62062 -----------------------------------------------------------------------------------------------------------T----------T-CTCTGCTTT-TTCGGA----T-----T------------------CAAGATAT-T-TCACAGTTCTAAAGGAGG-ACCAA--AATA-GAA----TAATA-ATT----------ACAA-AATAA-AAC
i Suricata_suricatta.SurSur_flattened_line_20339        I 58 C 0
s Sus_scrofa.CM000824.4                                 189269642  82 + 218635234 ---------------------------------------------------------------------------------------------------------tat----------t-ctttgcatttttctga----t-----t------------------caAGATAT-T-TCACAACTCTAAGGGAGA-ACCAA--AAca-gaa----taata-att----------acaa-aataaaaac
i Sus_scrofa.CM000824.4                                 I 53 C 0
s Symphalangus_syndactylus.tarseq_24                     13899066 142 +  13920577 AACTAC-AACA-A---A-ACA-C---TT-T-CGAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GCATG-CTTAC-TCA-TT--TA-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Symphalangus_syndactylus.tarseq_24                    C 0 I 62
s Tadarida_brasiliensis.TadBra_scaffold_145589               3574  95 -      6213 -------------------------------------------------------------------AT-T-----CTCAC-TCA-TT--TA-T--A--------TAT----------T-C--TGCATT-TTCTGA----T-----T------------------CAAGATAT-T-TAGCAATTCTAAAGGAGA-ACCAA--AACA-GAA----TAATA-ATT----------ACAA-AATAA-AAC
i Tadarida_brasiliensis.TadBra_scaffold_145589          I 79 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               12453 146 +     45698 ATCCAT-AACA-A---A-ATA-ATT-TG-T-CCAGATTTCTAGT-T-TCAT--G-GC--TG-G----GT-GCATT-CTGAC-TCA-TT--TA-A--A--------TAT----------T-CTCTACACT-TTCTGA----T-----T------------------CAAGATAA-T-TCACAATTCTAAAGAAGA-ACCAA--AATA-GAA----TAATA-ATT----------ACAA-AACAA-AAC
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      804456 144 +   1148477 ATTTAT-AACA-A---A-TAC-TTT-TT-T-CCAGAT--ACAGT-T-TTAT--G-AC--AG-G----AC-GCTTT-CACAC-TCA-TT--TA-C--A--------TAT----------T-CTCTGCATT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAAGAGA-ACCAA--ACTA-GAA----TAATA-ATT----------ACAA-AATAA-AAC
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  55117 144 +     99546 ATTTAT-AACA-A---A-TAC-TTT-TT-T-CCAGAT--ACGGT-T-TTAT--G-AC--AG-G----AT-GCTTT-CACAC-TCA-TT--TA-C--A--------AAT----------T-CTCTGCATT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAAGAGA-ACCAA--AATA-GAA----TAATA-ATT----------ACAA-AATAA-AAC
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               23807 108 +     42269 --------------------------------------------------T--G-GC--AA-A----AG-TCATT-ATCAC-TCA-TT--TA-T--A--------TGA----------T-CTCTGCATT-TTCTGA----T-----T------------------CAAGGTAT-T-TCACAATTCTAAAGGAGA-ACCAa--aata-gaa----taata-atc----------acaa-aacaa-aat
i Tarsius_lariang.k141_609102                           I 23 C 0
s Tarsius_wallacei.k141_48636                               57123 108 +     65473 --------------------------------------------------T--G-GC--AA-A----AG-TCATT-ATCAC-TCA-TT--TA-T--A--------TGA----------T-CTCTGCATT-TTCTGA----T-----T------------------CAAGGTAT-T-TCACAATTCTAAAGGAGA-ACCAa--aata-gaa----taata-att----------acaa-aacaa-aat
i Tarsius_wallacei.k141_48636                           I 23 C 0
s Theropithecus_gelada.CM009951.1                       194004390 142 - 194193292 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-C-TGAT--T-GC--AG-A----GT-GTATT-CCTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-Gga----taata-att----------acaa-aacaa-aac
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             36642 117 -     47444 --------------------------------TAGCC--CCAGT-T-TGGG--G-AT--CC-G----GT-ACTTT-CTCAC-TTA-AT--TA-C--A--------TAT----------C-CTCAGCATC-CTCTGA----T-----T------------------CAAGATAT-T-TTGAAATTCTAAAGGAGA-ACCAA--AATA-TAG----TAATA-ATT----------ATGA-AAC------
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         I 29 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  1336 143 +      6782 ATCTAT-AACA-A---A-ATA-CTT-TT-T-CCAGATTTCTAGT-T-TTAT--G-TC--AG-T----GT-GCATT-CTGAC-TCA-CT--TA-T--A--------TAT----------T-CTCTGCATC-TTTTGA----T-----T------------------CAAGATAA-C-TCACAATTCTAAA---GA-ACCAA--AATA-GAA----CAATA-ATT----------ACAA-AACAA-AAC
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  133595 141 -    259118 ATCTAT-AACA-A---A-ACA-ATT-TT-C-CCAGAT--TCAGT-TTTTAT--G-GC--AG-G----AT-GCA---TTTGC-TCA-TT--TA-T--A--------TAT----------T-C--TGCATT-TTCTGA----T-----T------------------CAAGTTAT-T-TAACAATTCTGAAAGAGA-ACCAA--AATA-GAA----TAATA-ATT----------ACAA-AATAA-AAC
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        23470 142 +     38948 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GTATT-CTTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   17197 142 -     32910 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GTATT-CTTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-TCACAATTCTAAAGGAAA-ACCAA--GATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       23095 142 +     24652 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GTATT-CTTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      1973 142 -      3559 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GTATT-CTTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-TCACAATTCTAAAGGAAA-ACCAA--GATA-GGA----TAATA-ATT----------ATAA-AACAA-AAC
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           39919 142 -     54611 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GTATT-CTTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----A-----T------------------GAAGACAC-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       15917 142 +     17312 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GTATT-CTTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    23281 142 -     25040 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GTATT-CTTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAGGACAC-T-TCACAATTCTAAAGGAAA-ACCAA--GATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          1947 137 +      3528 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GTATT-CTTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAGGACAC-T-TCACAATTCTAAAGGAAA-ACCAA--GATA-GGA----TAATA-ATT----------ACAA-AA------C
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  48309 142 +     51589 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GTATT-CTTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-TCACAATTCTAAAGGAAA-ACCAA--GATA-GGA----TAATA-ATT----------ATAA-AACAA-AAC
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       11485 142 +     14732 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GTATT-CTTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       1962 142 -     28054 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GTATT-CTTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-TCACAATTCTAAAGGAAA-ACCAA--GATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44656757 142 -  44834318 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GTATT-CTTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------GAAGACAC-T-TCACAATTCTAAAGGAAA-ACCAA--GATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        1767 142 +      3372 AACTAC-AACA-A---A-ACA-C---TT-T-CTAGAT--CTAGT-T-TGAT--T-GC--AG-A----GT-GTATT-CTTAT-TCA-TT--TG-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----A-----T------------------GAAGACAC-T-TCACAATTCTAAAGGAAA-ACCAA--AATA-GGA----TAATA-ATT----------ACAA-AACAA-AAC
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   2998  73 +     90398 ------------------------------------------------------------------------------------------------------------------------CTCTGCATT-TCCTGA----T-----T------------------CAAGATAT-TTTCACAATTCTAAAGGAGA-CCCAA--AATA-GAA----C-----ATT----------ACAA-AATAA-AAC
i Tragulus_javanicus.TraJav_scaffold_14717              I 66 C 0
s Trichechus_manatus.JH594618.1                          16079048 128 +  31416278 --------------------------TT-T-CCAGATTTCTAGT-T-TTAT--G-CA--AG-G----GT-GCATT-CTAAC-TCA-TT--TA-T--A--------TCT----------T-TTCAGCCTT-TTCTAA----T-----T------------------CAAGATAT-T-TCACAATtctaaagagaa-accaa--aata-gaa----taata-att----------ataa-aacaa-aac
i Trichechus_manatus.JH594618.1                         I 6 C 0
s Tupaia_chinensis.KB320831.1                             2789497  81 -   3938065 -----------------------------------------------------------------------------------ct-tt--ta-t--a--------cac----------t-gtCTGAATT-TTCTGA----T-----T------------------CACAatat-t-tcaaaattctaaaaga----aaaa--aata-gac----t---a-att----------gcaa-aacca-aa-
i Tupaia_chinensis.KB320831.1                           I 330 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    2013  85 +     13056 -----------------------------------------------------------------------------------CT-TT--TA-T--A--------CAC----------T-GTCTGAATT-TTCTGA----T-----T------------------CACAATAT-T-TCAAAATTCTAAAAAAAAAAAAAA--AATA-GAC----T---A-ATT----------ACAA-AACCA-AA-
i Tupaia_tana.TupTan_flattened_line_68454               I 338 C 0
s Tursiops_truncatus.MRVK01000923.1                      69311160 141 -  96451834 GTCTGT-AACA-A---A-ATA-CGT-TT-T-CCAGAT--TCAGT-T-TTAT--G-GC--AG-G----AT-GCATT-CTCAC-TCA-TT--TA-T--a--------tat----------t-ctctgcatt-ttctgA----C-----T------------------CGAGATAT-T-TTGTAATTCTAAAGGAGA-ACCaa--aata-gaa----t---a-att----------acaa-aataa-aac
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 24278 145 -     25548 GTCTAT-AACA-A---A-GTA-ATT-TT-T-CCCCAA--TCTGT-T-TTAT--G-GT--CA-A----AT-GTATT-CTAAC-TCA-CTGATA-T--A--------TAT----------T-CTCTGCATT--TCAGA----T-----C------------------CAAGATAT-T-TCACAATTCCAAATGAGA-ACCAA--AATA-GAA----TAATA-ATT----------ACAA-AATAA-AAC
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6511963  77 +  28682327 -----------------------------------------------------------------------------------------------------------T----------T-CTCTGCATT-TTCTAA----T-----T------------------CAAGATAT-T-TC-TAATTCAAAAGGAGA-Gcgaa--aata-gaa----taata-att----------acaa-aacaa-aac
i Ursus_maritimus.KK498671.1                            I 58 C 0
s Varecia_rubra.k141_432109                                  2526 144 -     20643 ATCTAC-AACA-A---A-ACA-C---TT-T-CCAGAC--CTAGT-A-TTAT--G-GCAGAG-G----GT-GCATT-CTCAC-TCA-TT--TA-T--A--------TAG----------T-CTCTGCCTT-TTCTGA----T-----C------------------CAAGATAT-T-TCACAATTCTAAAGGAGA-GCCAA--AATA-GAA----TAATA-ATT----------ACAA-AATAA-AAC
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             22070 144 -     33872 ATCTAC-AACA-A---A-ACA-C---TT-T-CCAGAC--CTAGT-A-TTAT--G-GCAGAG-G----GT-GCATT-CTCAC-TCA-TT--TA-T--A--------TAG----------T-CTCTGCCTT-TTCTGA----T-----C------------------CAAGATAT-T-TCACAATTCTAAAGGAGA-GCCAA--AATA-GAA----TAATA-ATT----------ACAA-AATAA-AAC
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1522390 142 -   2331223 ATCTAT-AACA-A---A-ATA-CTT-TT-T-CCAGAT--TCGAT-T-TTAT--G-GC--AG-G----AT-GCATT-TTCAC-TCA-TT--TA-T--A--------TAT----------T-CTCTGCAAT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAGAAGA-Tccaa--aata-gaa----taatt-att----------acat-aataa-a--
i Vicugna_pacos.KN269600.1                              C 0 I 1
s Vulpes_lagopus.VulLag_flattened_line_2045                134902  78 -    281493 -----------------------------------------------------------------------------------------------------------T----------T-CTCTGCATT-TTCCGA----T-----T------------------CAAGATAT-T-TCACAATTCTAAAGGAGA-ACCAA--AATA-GAA----TAATA-ATT----------ACAA-AACAA-AAC
i Vulpes_lagopus.VulLag_flattened_line_2045             I 58 C 0
s Xerus_inauris.XerIna_scaffold_7898                       124386  72 -    134049 ------------------------------------------------------------------------------------------------A--------TAT----------T-CTCT----T-CTTCAA----T-----T------------------CAAGATAT-T-TCCCAATTCTAAAGGAGA-ACTAA--AATA-GAA----TCATA-ATT----------ACAA-ACA------
i Xerus_inauris.XerIna_scaffold_7898                    I 53 I 30
s Zalophus_californianus.ZalCal_flattened_line_4097        211430  78 -    227762 -----------------------------------------------------------------------------------------------------------T----------T-CTCTGCATT-TTCTGA----T-----T------------------CAAGATAT-T-TCACAATTCTGAAGGAGa-accaa--aata-gaa----taata-att----------acaa-aacaa-aac
i Zalophus_californianus.ZalCal_flattened_line_4097     I 58 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     12598  96 -     20485 -------------------------------------------------------------------GT-GCACT-CTTAT-TCA-TT--TA-T--A--------TAT----------T-CTCTTCTTT-CTCTGA----T-----T------------------ATAGACAT-T-TTACCATGCTAAACAAGA-ACCAA--AATA-GAG----CAATA-ATT----------ACAA-AAC------
i Zapus_hudsonius.ZapHud_scaffold_64392                 I 56 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           4659 141 -      8775 GTCTGT-AACA-A---A-ATA-CTT-TT-T-CCAGAT--TCAGT-T-TTAT--G-GC--AG-G----AT-GCATT-CTCAC-TCA-TT--TA-T--A--------TAT----------A-CTCTGCATT-TTCTGA----C-----T------------------CGAGATAT-T-TCACAATTCTAAAGGAGA-ACCaa--aata-gaa----t---a-att----------acaa-aataa-aac
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Octodon_degus.JH651621.1                                3680632 1579 +  10294119 I

a score=0.000000
s hg38.chr4_GL000008v2_random                                9158 62 +    209709 AAAA-------A--GT--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-T--GACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
s Acinonyx_jubatus.LLWD01000356.1                         2031231 62 +   3721120 aa--a-a----a--ga--aa--ttga--gaaagataATTGAACAACTTAC--TC----T-C--AGCAACt-----------gga--t--t---t--------tt--aagaaa---c--------a
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    109818 60 -    189883 -AAG-------T--GA--AA--CTAA--ACAAGATAATTGCACAACTTAT--CC----A-C--AGCAACA-----------AGA--T--T---TTTT-----TT--AACA---------------
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10654555 33 +  23371972 aa--a-a----a--ga--aa--ttga--ggaagataaTTGAACAACTT-----------------------------------------------------------------------------
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 I 25
s Ailurus_fulgens.LNAC01000003.1                          7091277 62 -  16596857 aa--a-a----a--ga--aa--ttga--ggaggatAATTGGACAACTTAT--TC----T-C--AGCAAct-----------aga--t--t---t--------tt--aagaaa---c--------a
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   10242 63 -     22067 AAAA-------T--GA--AA--TGGA--AGAAGATAATTGAGCAACTTAT--TC----T-C--AGTAACC-----------AGA--T--C---TT-------TT--AGCTAA---C--------A
i Allactaga_bullata.AllBul_scaffold_70162               C 0 I 8
s Allenopithecus_nigroviridis.k141_3103707                  60172 62 +     61638 AAAA-------A--GT--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        51980 62 +     53391 aaaa-------A--GT--AA--TTGA--GGAAGATAATTGAGCAAGTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         2705 62 +     72529 AAAA-------A--GT--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          2280 62 +      3797 aaaa-------A--GT--AA--TTGA--GGAAGATAATTGAGCAAGTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             7460 62 -     18050 AAAA-------A--GG--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  8571 62 -     11521 AAAA-------A--GG--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              8137 62 -     21359 AAAA-------A--GG--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1856473                                6514 62 +      7227 AAAA-------A--GG--AA--TTGA--GGAAGATAATTGAGCAACTTGT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Alouatta_juara.k141_1856473                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          7428 62 -     10438 AAAA-------A--GG--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            4084 62 +      7047 AAAA-------A--GG--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             7370 62 +     10410 AAAA-------A--GG--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            1173 62 -      4927 AAAA-------A--GG--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             4101 62 +      6429 AAAA-------A--GG--AA--TTGA--GGAAGATAATTGAGCAACTTGT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3518001 62 +   4113121 aa--a-a----a--ga--aa--ctga--gCACAATAACTGAATATCTTAG--CC----T-C--AGCAACT-----------AGA--T--T---T--------TT--AGGAAA---C--------A
i Ammotragus_lervia.NIVO01013474.1                      I 61 I 2
s Anoura_caudifer.AnoCau_scaffold_422                      388183 62 -    631301 AA-------AAA--GA--AA--TTGA--GGAAGATAATTGAGCAGCTTAC--TC----T-C--AGCAACC-----------AGA--T--T---T--------TT--AAGAAA---T--------A
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 I 1
s Antilocapra_americana.AntAmePen_scaffold_42841            28603 62 +     33004 AA-------AAA--GA--AA--TTGA--GCACAATAACTGAATAACTTAG--GC----T-C--AGCAACT-----------AGA--T--T---T--------TT--AGGAAA---C--------A
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 I 2
s Aotus_azarae.k141_3170768                                 59828 62 +     78111 AAAA-------A--GG--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            2755 62 +     22701 AAAA-------A--GG--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5746713 62 +   9889416 aaaa-------a--gg--aa--ttga--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--t---t--------tt--aacaaa---c--------a
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             3298 62 -    104377 AAAA-------A--GG--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TC--AACAAA---C--------A
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               3304 62 +     23246 AAAA-------A--GG--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TC--AACAAA---C--------A
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     1321 59 +      5067 ---------------A--AA--TCGC--AGAAGATAATTACACAACTTAT--TC----T-C--AGCAAGT-----------AGG--T--T---TCTT-----TT--AACAAA---C--------A
i Aplodontia_rufa.AprRuf_scaffold_156013                I 3 I 2
s Arctocebus_calabarensis.k141_1161114                      15289 62 +     17483 GAAA-------A--GA--AA--TTGA--GGAAGATAATTGAACAACTTAT--TT----C-C--ATCAACT-----------AGA--A--T---T--------TT--CACAAA---C--------A
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 6569 62 -     29036 AA-------AAA--GA--AA--TTGA--GGAAGATAATTGAGCAGCTTAC--TC----T-C--AGCGACC-----------AGA--T--T---T--------TC--AGGCAA---T--------A
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9536566 62 +  39197703 aaaa-------A--GG--AA--TTGA--GGAAGATAATTGAGCTACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             57850 62 +     85812 aaaa-------A--GG--AA--TTGA--GGAAGATAATTGAGCTACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 8849 62 +     89302 aaaa-------A--GG--AA--TTGA--GGAAGATAATTGAGCTACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             13354 62 -     58268 AAAA-------A--GG--AA--TTGA--GGAAGATAATTGAGCTACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             61345 62 +    119057 aaaa-------A--GG--AA--TTGA--GGAAGATAATTGAGCTACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               3296 62 -     25888 AAAA-------A--GG--AA--TTGA--GGAAGATAATTGAGCTACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 4047 62 -     16375 AAAA-------A--GA--AA--TTGA--GGAAGATAATTCAACAACTTAT--TT----T-C--AGCAACT-----------AGA--T--T---T--------TT--AACAAA---C--------A
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                               367 62 +      2719 aaaa-------a--ga--aa--tTGA--GGAAGATAATTGAACAACTTAT--TT----T-C--AGCAACT-----------AGA--T--T---T--------TT--AACAAA---C--------A
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26378017 62 +  51448160 aa--a-a----a--ga--aa--ttga--gGACAATAATTGAGCAACTTAC--TC----T-C--AGCAACT-----------AGA--T--T---T--------TT--AAGAAG---C--------A
i Balaenoptera_acutorostrata.KI537095.1                 C 0 I 2
s Balaenoptera_bonaerensis.DF502048.1                        3248 62 -     13118 aa--a-a----a--ga--aa--ttga--gGACAATAATTGAGCAACTTAC--TC----T-C--AGCAACT-----------AGA--T--T---T--------TT--AAGAAG---C--------A
i Balaenoptera_bonaerensis.DF502048.1                   C 0 I 2
s Beatragus_hunteri.BeaHun_scaffold_21644                   41099 62 -     72089 AA-------AAA--GA--AA--CTGA--GCACAATAACTGAATAACTTAG--CC----T-C--AGCAACT-----------AGA--T--T---T--------TT--AGGAAA---C--------A
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 I 2
s Bison_bison.KN264915.1                                  6557108 62 +   6870073 aa--a-a----a--ga--aa--ttga--gCACAATAACTGAATAACTTAG--TC----T-C--AGCAACT-----------AGA--T--T---T--------TT--AGGAAA---C--------A
i Bison_bison.KN264915.1                                C 0 I 2
s Bos_indicus.CM003021.1                                138137347 62 - 161108492 aa--a-a----a--ga--aa--ttga--gCACAATAACTGAATAACTTAG--TC----T-C--AGCAACT-----------AGA--T--T---T--------TT--AGGAAA---c--------a
i Bos_indicus.CM003021.1                                C 0 I 2
s Bos_mutus.JH883513.1                                     569721 62 -    998990 aa--a-a----a--ga--aa--ttga--gCACAATAACTGAATAACTTAG--TC----T-C--AGCAACT-----------AGA--T--T---T--------TT--AGGAAA---c--------a
i Bos_mutus.JH883513.1                                  C 0 I 2
s Bos_taurus.CM000177.6                                 136293080 62 - 158972876 aa--a-a----a--ga--aa--ttga--gCACAATAACTGAATAACTTAG--TC----T-C--AGCAACT-----------AGA--T--T---T--------TT--AGGAAA---c--------a
i Bos_taurus.CM000177.6                                 C 0 I 2
s Bubalus_bubalis.KI419065.1                              1228836 62 -   1914593 aa--a-a----a--ga--aa--ttga--gCACAATAACTGAATAACTTAG--TC----T-C--AGCAACT-----------AGA--T--T---T--------TT--AGGAAA---c--------a
i Bubalus_bubalis.KI419065.1                            C 0 I 2
s Cacajao_ayresi.k141_724503                               111189 62 -    171031 ACAA-------A--GG--AA--CTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 10215 62 +    125063 ACAA-------A--GG--AA--CTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                12263 62 -    216513 ACAA-------A--GG--AA--CTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        4803 62 -    134917 ACAA-------A--GG--AA--CTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3217441 53 -   8989139 -----------a--ga--aa--ttga--ggaCAATAATTGAGCAGCTTAT--TC----A-C--AGTAACT-----------AGA--T--T---T--------GC--AAC----------------
i Camelus_bactrianus.KN276303.1                         I 1 C 0
s Camelus_dromedarius.KN271192.1                           395145 53 -  15254737 -----------a--ga--aa--ttga--ggaCAATAATTGAGCAGCTTAC--TC----A-C--AGTAACT-----------AGA--T--T---T--------GC--AAC----------------
i Camelus_dromedarius.KN271192.1                        I 1 C 0
s Camelus_ferus.KB016973.1                                2970879 53 +   6889770 -----------a--ga--aa--ttga--ggaCAATAATTGAGCAGCTTAT--TC----A-C--AGTAACT-----------AGA--T--T---T--------GC--AAC----------------
i Camelus_ferus.KB016973.1                              I 1 C 0
s CanFam4.chr31                                          11515934 62 +  39901454 aa--a-a----A--GA--AA--TTGA--GGATGATAATTGAACAACTTAC--TC----T-C--AGCAACT-----------AGA--T--T---T--------TT--AAGAAA---C--------A
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   10952 62 +     87036 AA-------AAA--GA--AA--TTGA--GGATGATAATTGAACAACTAAC--TC----T-C--AGCAACT-----------AGA--T--T---T--------TT--AAGAAA---C--------A
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11262595 62 -  35597290 aa--a-a----a--ga--aa--ttga--ggatgataATTGAACAACTTAC--TC----T-C--AGCAAct-----------aga--t--t---t--------tt--aagaaa---c--------a
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11085124 62 +  39895921 aa--a-a----a--ga--aa--ttga--ggatgataATTGAACAACTTAC--TC----T-C--Agcaaat-----------aga--t--t---t--------tt--aagaaa---c--------a
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16452148 62 -  44759192 aa--a-a----a--ga--aa--ttga--ggatgataATTGAACAACTTAC--TC----T-C--Agcaaat-----------aga--t--t---t--------tt--aagaaa---c--------a
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21323106 62 + 157394656 aa--a-a----a--ga--aa--ctga--gCACAATAACTGAATATCTTAG--CC----T-C--AGCAACT-----------AGA--T--T---T--------TT--AGGAAA---C--------A
i Capra_aegagrus.CM003214.1                             I 61 I 2
s Capra_hircus.CM004562.1                               135704333 62 - 157403528 aa--a-a----a--ga--aa--ctga--gCACAATAACTGAATATCTTAG--CC----T-C--AGCAACT-----------AGA--T--T---T--------TT--AGGAAA---C--------A
i Capra_hircus.CM004562.1                               I 61 I 2
s Capromys_pilorides.CapPil_scaffold_4058357                  122 66 +       236 AAAA-------C--AA--AA--CTGA--AG-AGATAATTGAGCGATTTAT--TC----T-C--AGAAACT-----------AGT--T--T---TTTTTTTTGTT--AACAA--------------
i Capromys_pilorides.CapPil_scaffold_4058357            N 0 C 0
s Carlito_syrichta.NW_007248099.1                          306434 27 +    345090 gaaa-------a--ga--aa--taga--ggAAGATAATAGAG-----------------------------------------------------------------------------------
i Carlito_syrichta.NW_007248099.1                       C 0 I 21
s Carollia_perspicillata.CarPer_scaffold_4436               57367 62 +     67245 AA-------AAA--GA--AA--TTGA--GAAAGATAACTGAGCAGCTTAC--TC----T-C--AACAACC-----------AGA--T--T---T--------TT--AGGTAA---T--------A
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   27852 63 +     33760 AAGG-------C--AA--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AGCAACT-----------AGA--T--T---TT-------TT--AACAAA---C--------A
i Castor_canadensis.CasCan_scaffold_47037               C 0 I 2
s Catagonus_wagneri.CatWag_scaffold_1305                   156663 62 -    276539 AA-------AAA--GA--AA--TTCT--GGACAATAATTGAGCAATTTCC--TC----T-T--AGCAACT-----------AGA--T--T---T--------TT--AAGAAA---C--------A
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15784017 66 -  24422027 aaaa-------c--aa--aa--ttga--gg-aGATAATTGGGAAATTTAT--TC----G-C--AGCAACT-----------AGA--T--T---CTTTT---GTT--AACAAA---C--------A
i Cavia_aperea.AVPZ01000278.1                           C 0 I 2
s Cavia_porcellus.DS562889.1                             15795949 66 -  24440124 aaaa-------c--aa--aa--ttga--gg-aGATAATTGGGAAATTTAT--TC----A-C--AGCAACT-----------AGA--T--T---CTTTT---GTT--AACAAA---C--------A
i Cavia_porcellus.DS562889.1                            C 0 I 2
s Cavia_tschudii.CavTsc_scaffold_488                       174140 66 +    436027 AAAA-------C--AA--AA--TTGA--GG-AGATAATTGGGAAATTTAT--TC----A-C--AGCAACT-----------AGA--T--T---CTTTT---GTT--AACAAA---C--------A
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 I 2
s Cebus_albifrons.Contig22                               18888041 62 -  29618158 AAAA-------A--GG--AA--TTGG--GGGAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 5585 62 -     26817 AAAA-------A--GG--AA--TTGG--GGGAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                 9828 62 +     25043 aaaa-------A--GG--AA--TTGG--GGGAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         5471 27 +     21754 gaaa-------a--ga--aa--taga--ggaagataatagaG-----------------------------------------------------------------------------------
i Cephalopachus_bancanus.k141_702587                    C 0 I 21
s Ceratotherium_simum.JH767818.1                          4361161 62 +   7569818 aa--a-a----a--ga--aa--ttga--ggaagataATTGAGCAACTTAC--TG----T-C--AGCAAct-----------aga--t--t---t--------tt--aagaaa---c--------a
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623          916 62 -      9338 AA-------AAA--GA--AA--TTGA--GGAAGATAATTGAGCAACTTAC--TG----T-C--AGCAACT-----------AGA--T--T---T--------TT--AAGAAA---C--------A
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6551964 62 +   6739814 aaaa-------a--gt--aa--ttga--GGAAGATAATTGAGCAACTTAC--TC----T-C--AACAACT-----------AGC--T--t---t--------tt--aacaaa---c--------a
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      53441 62 -     54931 AAAA-------A--GT--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         18425 62 -     19697 AAAA-------A--GT--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         55956 62 -    107033 AAAA-------A--GT--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        2401 62 -      3853 AAAA-------A--AT--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          26334 62 +     30494 AAAA-------A--GT--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           2358 62 -      4022 AAAA-------A--GT--AA--TTGG--GGAAGATAATTGAGCAACTTAT--CC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          2251 62 -      3505 AAAA-------A--GT--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           21041 62 +     35983 AAAA-------A--GT--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11987577 62 +  12117833 AAAA-------A--GT--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46474330 62 +  46592721 AAAA-------A--GT--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      32157 62 +     33420 AAAA-------A--GT--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        2193 62 -      3443 CAAA-------A--GT--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      3184 62 -      4669 AAAA-------A--GT--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        2979 62 -      4411 AAAA-------A--GT--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         2509 62 -      4205 AAAA-------A--GT--AA--TTGG--GGAAGATAATTGAGCAACTTAT--CC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_1070855           718 62 -      1715 AAAA-------A--GA--AA--TTGA--TGAGGATAATTGACCAACTTCT--TC----T-A--AGCAACT-----------GGA--T--T---T--------TT--AAGAAG---C--------A
i Chaetophractus_vellerosus.ChaVel_scaffold_1070855     C 0 C 0
s Cheirogaleus_major.k141_1157592                           56352 62 -     68416 AAAA-------A--GA--AA--TTGA--GGAAGATAATTGAACAACTTAT--TT----T-C--AGCAACT-----------AGA--T--T---T--------TT--AACAAA---C--------A
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            5398 62 +     13308 AAAA-------A--GA--AA--TTGA--GGAAGATAATTGAACAACTTAT--TT----T-C--AGCAACT-----------AGA--T--T---T--------TT--AACAAA---C--------A
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             2863 62 -     18223 AAAA-------A--GG--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             19886 62 +     25473 aaaa-------A--GG--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           38925 62 +     57117 aaaa-------A--GG--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          43600 62 +     54541 aaaa-------A--GG--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15959186 66 +  43084221 gaaa-------c--aa--aa--ttga--aa-agataattgAGCAATTTAT--TC----T-C--AGCAACT-----------AGC--T--T---TTTT---CGTT--AACAAA---C--------A
i Chinchilla_lanigera.JH721867.1                        C 0 I 2
s Chiropotes_israelita.k141_1189915                         68410 62 +    196370 ACAA-------A--GG--AA--CTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          12591 62 +     40510 ACAA-------A--GG--AA--CTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15135791 62 -  15256731 AAAA-------A--GT--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      30837 62 -     53260 AAAA-------A--GT--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101141286 62 + 101219884 aaaa-------a--gt--aa--ttga--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--t---t--------tt--aacaaa---c--------a
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                14324 62 -     21363 AAAA-------A--GA--AA--TTGA--GAAGGATAATTGACCAACTTTT--TC----T-A--AGTGACT-----------AGA--T--T---T--------TT--AAGAAG---C--------A
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           759634 62 +    964067 aaaa-------a--ga--aa--ttga--gaagGATAATTGACCAACTTTT--TC----T-A--AGtgact-----------aga--t--t---t--------tt--aaaaag---c--------a
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_141308              6426 63 -     12508 AAAA-------A--GA--TA--TTGA--AGTAGATAATTGCCCAATTTAT--TC----T-A--TGCAGCT-----------AGA--A--TAAAT--------TT--AAGAAA-------------
i Chrysochloris_asiatica.ChrAsi_scaffold_141308         C 0 C 0
s Colobus_angolensis.KN985967.1                          10879865 62 +  10971483 aaaa-------a--gt--aa--ttga--GGAAGATATTTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--t---t--------tt--aacaaa---c--------a
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147661023 62 + 156195979 AAAA-------A--GT--AA--TTGA--GGAAGATATTTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            13010 62 +     23629 AAAA-------A--GT--AA--TTGA--GGAAGGCAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60610626 34 +  78930452 aa--a-a----a--ga--aa--ttga--ggaaGATAATTGAGCAACTT----C------------------------------------------------------------------------
i Condylura_cristata.JH655880.1                         C 0 I 24
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         37078 64 -     40477 AA---------AAAGA--AA--TTTA--GGAAGATAATTGAGCAATTTCA--TC----T-C--AGCAACT-----------AGA--T--T---T--------TT--AAGAAA---C------AGA
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 I 1
s Cricetomys_gambianus.CriGam_scaffold_949                 274910 58 -    399297 -AAA-------T--GA--AA--TTGA--ACAAGATAATTGACCAACTTAT--CC----T-C--AGCAACC-----------AGA--T--T---TT-------TT--AACA---------------
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53026445 58 +  72327488 -AAA-------T--GA--AA--TTGA--ATAAGATAATTGAGCAACTTAT--CC----T-C--AGCCACC-----------AGA--T--T---TT-------TG--CACA---------------
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             17573 54 -     19186 T----------A--AA--TA--TT-----GAAGATAACTAAGGAACTT--ACTC----T-C--A--AACT-----------AGA--T--T---T--------TT--AAGAAA---A--------A
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            49242 62 -     70449 AA-------AAA--GA--GA--TTGA--GAAAGATAATTGAACAACCTAA--TC----T-C--AGCAACT-----------GGA--T--A---T--------TT--AAGAAA---C--------A
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  205620 40 -    956709 -------------------A--TCAA--GG-AGATAATTGAGCTATTTAT--TT----C-C--AGCAACT-----------AGT-----------------------------------------
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 I 12
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 27963 64 -     67205 AAAA-------C--AA--AA--CC--CAAG-AGATAATAGAGCAATTTAT--TT----T-C--AGAAACT-----------AGTGGT--T---TTTT----GTT--AACAA--------------
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 I 17
s Cuniculus_paca.CunPac_flattened_line_16637                14799 61 +     26546 --------------AA--AA--TTGA--AT-AGATAATTGAGCAATTTAT--TC----T-C--AGCAACT-----------AGC--T--T---CTTTT---GCT--AACAAA---C--------A
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 I 2
s Dasyprocta_punctata.DasPun_flattened_line_634             56274 66 -    236241 AAAA-------C--AA--AA--TTGA--AG-ATATAATTGAGCAATTTAT--TC----T-C--AGCAGCT-----------AGC--T--T---CTTTT---GTT--AACAAA---T--------G
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 I 2
s Dasypus_novemcinctus.JH568778.1                          179527 62 -   6883506 aaaa-------a--ga--aa--ttga--tgagGATAATTGACCAACTTAT--TC----T-A--AGCAACT-----------GGA--T--T---T--------TT--AAGAAG---C--------A
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16842220 62 +  31942871 AAAA-------A--GA--AA--TTGA--GGAAGATAATTGAACAACTTAT--TT----T-C--AGCAACT-----------AGA--T--T---T--------TT--AGCAAA---C--------A
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80034701 62 -  96802777 aa--a-a----a--ga--aa--ttga--ggACAATAATTGAGCAAATTAC--TC----T-C--AGCTACT-----------AGA--T--T---T--------TT--AAGAAG---C--------A
i Delphinapterus_leucas.KZ290064.1                      C 0 I 2
s Desmodus_rotundus.KZ672188.1                           18696679 51 -  18957592 aa--a-a----a--gg--aa--ttga--GGAAGATAATTGAGCAGCTCAC--TC----T-C--AGCAACc-----------aga--t--t-----------------------------------
i Desmodus_rotundus.KZ672188.1                          C 0 I 10
s Dicerorhinus_sumatrensis.PEKH010003161.1                 319822 60 +    993696 aa---------a--ga--aa--ttga--ggaagataATTGAGCAATTTAC--TG----T-C--AGCAAct-----------aga--t--t---t--------tt--aagaaa---c--------a
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                    462 62 +    151128 AA-------AAA--GA--AA--TTGA--GGAAGATAATTGAGCAACTTAC--TG----T-C--AGCAGCT-----------AGA--T--T---T--------TT--AAGAAA---C--------A
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   155072 65 +    228994 AAAA-------C--AA--AA--TTGA--AG-AGATAATTGAGCAATTTAT--TC----T-C--AGAAAAT-----------AGC--T--T---TTTT----GTT--AACAAA---C--------G
i Dinomys_branickii.DinBra_scaffold_1996                C 0 I 2
s Dipodomys_ordii.KN672545.1                              3652822 62 +   4240102 aaaa-------t--aa--aa--tggg--ggAAGATAATTGGGCAGCTT-T--TT----G-C--AGCAacc-----------aga--c--t---t-------ttt--aaaaaa---c--------a
i Dipodomys_ordii.KN672545.1                            C 0 I 2
s Dipodomys_stephensi.DipSte_scaffold_44365                 24381 62 +     28912 AAAA-------T--AA--AA--TGGG--GGAAGATAATTGGGCAGCTT-T--TT----G-C--AGCAACC-----------AGA--C--T---TT-------TT--AAAAAA---C--------A
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 I 2
s Dolichotis_patagonum.DolPat_scaffold_14102                33531 66 -     73477 AAAA-------C--AA--AA--TTGA--AG-AGGTAATTGAGCAATTTAT--TC----T-C--AGCAACT-----------AGA--T--T---CTTTT---GTT--AACAAA---T--------A
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 I 2
s Echinops_telfairi.AAIY02274224.1                            222 55 +      1655 --AA-------A--GA--T-----GA--GGAGACTAGTTGACTAACTTAC--TC----T-A--AGTCTCT-----------Agg--t--t---t--------tt--aagaag-------------
i Echinops_telfairi.AAIY02274224.1                      C 0 C 0
s Eidolon_helvum.KE772537.1                                 10056 62 +     24177 aa---------a--aa--aa--ttga--ggaagataATTGAGCAACTTAC--TC----T-C--AGcaatt-----------aga--t--t---t--------tt--aagaaa---ca------ga
i Eidolon_helvum.KE772537.1                             C 0 I 1
s Elaphurus_davidianus.JRFZ01086400.1                     1489364 62 +   1727528 aa--a-a----a--ga--aa--ctga--gCACAATAACTGAATAACTTAG--TC----T-C--AGCAGCT-----------AGA--T--T---T--------CT--AGGAAA---C--------A
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 I 2
s Elephantulus_edwardii.JH947210.1                        7804117 62 +  15467074 AAGT-------T--TA--TT----GA--AGAAGATAATTAACTTGCTTGT--TA----T-A--AGCAGCT-----------AGA--TCTT---T--------Tt--aagaag---c--------a
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        237102 58 -    369425 -aga-------t--ga--aa--ttga--agaagataattGAGCAACTTAT--CC----T-C--AGCAACC-----------AGA--T--T---TT-------TT--AACA---------------
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           4117 30 -      7838 -AGA-------T--GA--AA--TTGA--ACAAGATAATTGAGCAAC-------------------------------------------------------------------------------
i Ellobius_talpinus.LOJH01090055.1                      C 0 I 26
s Enhydra_lutris.KZ291749.1                              85869006 62 +  99434291 aa--a-a----a--ga--aa--ctga--ggaagataaTTGGACAACTTCT--TC----T-C--AGCAACT-----------Aga--t--t---t--------tc--aagaaa---c--------a
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4701680 19 +   6522550 -------------------------------------------------------------------NNN-----------NNN--N--N---N--------NN--NNNNNN---N--------N
i Eptesicus_fuscus.JH977687.1                           N 0 C 0
s Equus_asinus.JREZ01000062.1                             5850543 62 -   7175178 aa--a-a----a--ga--ga--ttga--GGAAGATAATTGAGCAACTTAC--TG----T-C--AGCAACT-----------AGA--T--T---T--------TT--AACGAA---C--------A
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13349045 62 +  41866177 aa--a-a----a--ga--ga--ttga--GGAAGATAATTGAGCAACTTAC--TG----T-C--AGCAACT-----------AGA--T--T---T--------TT--AAGGAA---C--------A
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          10535 62 +     92910 aa--a-a----a--ga--ga--ttga--GGAAGATAATTGAGCAACTTAC--TG----T-C--AGCAACT-----------AGA--T--T---T--------TT--AAGGAA---C--------A
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11530337 67 +  16010500 aa--acaaaaaa--gg--aa--ttga--GGAAGATAATAGAGCAACCA--ACTC----T-T--AGCAact-----------aaa--t--t---t--------ta--aagaaa---c--------a
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48767969 62 -  48907691 AAAA-------A--GT--AA--TTGA--GGAAGATAATTGAGTAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          312903 62 +    330699 AA-------AAA--GA--AA--TTGA--GGACAATAATTGAGCAACTTAC--TC----T-C--AGCAACT-----------AGA--T--T---T--------TT--AAGAAG---C--------A
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 I 2
s Eubalaena_japonica.EubJap_flattened_line_7756             59333 62 +     89355 AA-------AAA--GA--AA--TTGA--GGACAATAATTGAGCAACTTAC--TC----T-C--AGCAACT-----------AGA--T--T---T--------TT--AAGAAG---C--------A
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 I 2
s Eulemur_albifrons.k141_715837                              2401 62 +     13586 AAAA-------A--GA--AA--TTGA--GGAAGATAATTGAACAACTTAT--TT----T-C--AGCAACT-----------AGA--T--T---T--------TT--AACAAA---C--------A
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               2336 62 -      6809 AAAA-------A--GA--AA--TTGA--GGAAGATAATTGAACAACTTAT--TT----T-C--AGCAACT-----------AGA--T--T---T--------TT--AACAAA---C--------A
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             8809 62 +     36558 AAAA-------A--GA--AA--TTGA--GGAAGATAATTGAACAACTTAT--TT----T-C--AGCAACT-----------AGA--T--T---T--------TT--AACAAA---C--------A
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             5125 62 +     60246 AAAA-------A--GA--AA--TTGA--GGAAGATAATTGAACAACTTAT--TT----T-C--AGCAACT-----------AGA--T--T---T--------TT--AACAAA---C--------A
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 8613 62 +    109717 AAAA-------A--GA--AA--TTGA--GGAAGATAATTGAACAACTTAT--TT----T-C--AGCAACT-----------AGA--T--T---T--------TT--AACAAA---C--------A
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               12987 62 +     16540 AAAA-------A--GA--AA--TTGA--GGAAGATAATTGAACAACTTAT--TT----T-C--AGCAACT-----------AGA--T--T---T--------TT--AACAAA---C--------A
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                13263 62 +     27497 AAAA-------A--GA--AA--TTGA--GGAAGATAATTGAACAACTTAT--TT----T-C--AGCAACT-----------AGA--T--T---T--------TT--AACAAA---C--------A
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           15725 62 +     26808 AAAA-------A--GA--AA--TTGA--GGAAGATAATTGAACAACTTAT--TT----T-C--AGCAACT-----------AGA--T--T---T--------TT--AACAAA---C--------A
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                30453 62 +     46535 AAAA-------A--GA--AA--TTGA--GGAAGATAATTGAACAACTTAT--TT----T-C--AGCAACT-----------AGA--T--T---T--------TT--AACAAA---C--------A
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              13176 62 -     29447 AAAA-------A--GA--AA--TTGA--GGAAGATAATTGAACAACTTAT--TT----T-C--AGCAACT-----------AGA--T--T---T--------TT--AACAAA---C--------A
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129890208 62 - 159252932 aa--a-a----a--ga--aa--ttga--gaaagataATTGAACAACTTAC--TC----T-C--AGCAACt-----------gga--t--t---t--------tt--aagaaa---c--------a
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129277283 62 - 158578461 aa--a-a----a--ga--aa--ttga--gaaagataATTGAACAACTTAC--TC----T-C--AGCAACt-----------gga--t--t---t--------tt--aagaaa---c--------a
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 18417 62 +     52776 AA-------AAA--GA--AA--TTGA--GAAAGATAATTGAACAACTTAC--TC----T-C--AGCAACT-----------GGA--T--T---T--------TT--AAGAAA---C--------A
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13890157 60 -  19261668 aaaa-------c--aa--aa--ttga--ag-agtTGTGTGAACAGTTTAT--TC----T-C--AGCAACT-----------AGG--T--T---TTTT----GTT--AAT----------------
i Fukomys_damarensis.KN123630.1                         C 0 I 1
s Galago_moholi.ctg555                                     208342 62 -    847004 AAAA-------A--GA--AA--TTGA--GGAAGATAATTGCACAACTTAC--TT----C-C--AGCAACT-----------AGA--T--T---C--------TT--AACAAA---C--------A
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           10723 62 -     43889 AAAA-------A--GA--AA--TTGA--GGAAGATAATTGCACAACTTAC--TT----C-C--AGCAACT-----------AGA--T--T---C--------TT--AACAAA---C--------A
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           7788 61 +     27357 -aaa-------a--ga--aa--ttga--ggaagataaTTGAACAACTTAT--TT----C-C--AGCAACT-----------AGA--T--T---C--------TT--AACAAA---C--------A
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               153675 62 +    324696 AAAA-------A--GA--AA--TTGA--GGAAGATAATTGAACAACCTCT--TT----T-C--AGCAACT-----------AGA--C--T---T--------TT--GACAAC---C--------A
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 I 2
s Giraffa_tippelskirchi.LVKQ01S012154.1                    178881 62 -    189561 aa--a-a----a--ga--aa--tcga--GTACAATAACTGAATAACTTAG--TC----T-C--ATCAACT-----------AGA--T--T---T--------TT--AGGAAA---C--------A
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 I 2
s Glis_glis.GliGli_scaffold_79770                           10076 65 -     18683 AACG-------T--AA--AA--TTGA--GGAAGATGACTGAATAACTTAT--TC----T-C--AGCAAAT-----------AGA--T--T---TGTT-----TT--AACACA---G--------A
i Glis_glis.GliGli_scaffold_79770                       C 0 I 2
s Gorilla_beringei.k141_111300                               2558 62 -     14630 AAAA-------A--GT--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119649657 62 - 195582420 aaaa-------a--gt--aa--ttga--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--t---t--------tt--aacaaa---c--------a
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   74612 65 +    118900 AATG-------T--GA--AA--TTGA--GGAAGATAACTGAGTAACTTAT--TC----T-C--AGCAAAT-----------AGA--T--T---GGTT-----TT--AACACA---G--------A
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 I 2
s Hapalemur_alaotrensis.k141_1198205                         2989 31 +      3980 ----------------------------------------------TTAT--TT----T-C--AGCAACT-----------AGA--T--T---T--------TT--AACAAA---C--------A
i Hapalemur_alaotrensis.k141_1198205                    I 20 C 0
s Hapalemur_gilberti.k141_97962                             25464 31 +     26611 ----------------------------------------------TTAT--TT----T-C--AGCAACT-----------AGA--T--T---T--------TT--AACAAA---C--------A
i Hapalemur_gilberti.k141_97962                         I 20 C 0
s Hapalemur_griseus.k141_1387522                             2926 31 +     56096 ----------------------------------------------TTAT--TT----T-C--AGCAACT-----------AGA--T--T---T--------TT--AACAAA---C--------A
i Hapalemur_griseus.k141_1387522                        I 20 C 0
s Hapalemur_meridionalis.k141_186231                        26201 31 -     42470 ----------------------------------------------TTAT--TT----T-C--AGCAACT-----------AGA--T--T---T--------TT--AACAAA---C--------A
i Hapalemur_meridionalis.k141_186231                    I 20 C 0
s Hapalemur_occidentalis.k141_797938                        42795 31 -     54384 ----------------------------------------------TTAT--TT----T-C--AGCAACT-----------AGA--T--T---T--------TT--AACAAA---C--------A
i Hapalemur_occidentalis.k141_797938                    I 20 C 0
s Helogale_parvula.HelPar_flattened_line_22962              14453 62 +     53719 AA-------AAA--GA--AA--TTGA--GAAAGATAATTGAACAACTTAC--TC----T-C--AGCAACT-----------GGA--T--A---T--------TT--AAGAAA---C--------A
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                25377 62 -     91191 AA-------AAA--GA--AA--CTGA--GCACAATAACTGAATAACTTAG--CC----T-C--AGCAACT-----------AGA--T--T---T--------TT--AGGAAA---C--------A
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 59 I 2
s Heterocephalus_glaber.JH602058.1                        2548535 66 +  31725842 aaaa-------c--aa--aa--ttga--ag-agATAATTGATCAATTTAT--TC----T-C--AGcaact-----------aag--t--t---t---ttttttt--aacaaa---c--------a
i Heterocephalus_glaber.JH602058.1                      C 0 I 2
s Heterohyrax_brucei.HetBruBak_scaffold_25354               53924 63 +     73687 AAGA-------A-TGA--TA--TTGA--GGAAGATAATTGTCCAACTTAT--TC----T-A--AGTAGCT-----------CGG--T--T---T--------TT--AAGAAG---A--------A
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 I 5
s Hippopotamus_amphibius.HipAmp_scaffold_1308              144939 62 +    277961 AA-------AAA--GA--AA--TTGA--GGACAATAACTGAGCAACTTAC--TC----T-C--AGCAACT-----------AGA--T--T---T--------TT--AAGAAA---C--------A
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 I 2
s Hipposideros_armiger.JXIK01001085.1                      276265 72 -    477199 aa---------aaaga--aa--ttga--gaaagatAATTGAGCAACTTAA--TC----T-C--AGCAACTTAAACTCAGcaaga--t--t---t--------ta--aagaaa---c---------
i Hipposideros_armiger.JXIK01001085.1                   C 0 I 2
s Hipposideros_galeritus.HipGal_scaffold_104691              5424 72 -      9143 AA---------AAAGA--AA--TTGA--AGAAGATAATTGAGCAACTTAA--TC----T-C--AGCAACTTAAACTCAGCAAGA--T--T---T--------TA--AAGAAA---C---------
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 I 2
s Hoolock_leuconedys.ctg649                                    99237 62 +    115816 AAAA-------A--GT--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Hoolock_leuconedys.ctg649                                I 335 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 13519 51 -     67322 GA-------AAA--GA--AA--TAGA--GAAAGATAATTGAACAACTTAC--TC----T-C--AGCAACT-----------GGA--T--T-----------------------------------
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 I 10
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16436 66 -    119109 AGAA-------C--AA--AA--TAGA--AG-AGATAATTGAGCAATTTAT--TC----T-C--AGCAACT-----------AGA--T--T---CTTTT---GTT--AACAAA---C--------A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 I 2
s Hylobates_abbotti.k141_493872                              2375 62 +      5897 AAAA-------A--GT--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_1485652                               801 62 -      1697 AAAA-------A--GT--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Hylobates_agilis.k141_1485652                         I 183 I 82
s Hylobates_klossii.k141_584463                               751 62 -      1009 AAAA-------A--GT--AA--TTGA--GGAAGGTAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Hylobates_klossii.k141_584463                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14621920 62 -  25970782 AAAA-------A--GT--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1133650                            1809 62 -      2775 AAAA-------A--GT--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AGCAAA---C--------A
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             30412 62 -     60944 AAAA-------A--GT--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     3566 66 +     22540 AAAA-------C--AA--AA--TTGA--AG-AGATAATTGGTCAATTTAT--TT----G-C--AGCAACT-----------AGG--T--T---TTTTT---GTT--AACAAA---C--------A
i Hystrix_cristata.HysCri_scaffold_50788                C 0 I 2
s Ictidomys_tridecemlineatus.JH393315.1                   7123442 64 +  13083262 aa-a-------c--GA--AA--TTGT--GGAAGATAATTGAGAAACTTAT--TC----T-C--AGCAAGC-----------AGA--T--T---T-----Ctttt--aacaaa---c--------a
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 I 2
s Indri_indri.k141_1884019                                    641 62 -      2196 AGAA-------A--GA--AA--TTGA--GGAAGATAATTGAACAACTTAT--TT----T-T--AGCAACT-----------AGA--T--T---T--------TT--AACAAA---C--------A
i Indri_indri.k141_1884019                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               6690 62 +     17520 AA-------AAA--GA--AA--TTGA--GGACAATAATTGAGCAACTTAC--TC----T-C--AGCAACT-----------AGA--T--T---T--------TT--AAGAAG---C--------A
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 I 2
s Jaculus_jaculus.JH725517.1                              8562983 63 +  11848649 aaaa-------t--ga--aa--tgga--agaagaTAATTGAGCAACTTAT--TC----T-C--AGCAACA-----------AGA--T--C---TT-------tt--agcaaa---c--------a
i Jaculus_jaculus.JH725517.1                            C 0 I 7
s Kogia_breviceps.KogBre_flattened_line_35920               21520 62 +     37189 AA-------AAA--GA--AA--TCGA--GGACCATAATTGAGCAACTTAC--TC----T-C--AGCAACT-----------AGA--T--T---T--------TT--AAGAAG---C--------A
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 I 2
s Lagothrix_lagothricha.k141_12968                          47420 62 -    147782 AAAA-------A--GG--AA--TTGA--GGAAGATAATTGAGGTACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   111433 65 -    115756 AA-------AAG--GA--AA--TTGA--GGAAGATAATTGAGCAACTTAC--TC----TTCA-AGCAAAC-----------AGA--T--T---TT-------TT--TAGAAA---T--------G
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258404453 62 - 285822530 AAAA-------A--GA--AA--TTGA--GAAAGCTAATTGAACAACTTAT--TT----T-C--AGCAACT-----------AGA--T--T---T--------TT--AACAAA---C--------A
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        21325 62 +     39228 AAAA-------A--GA--AA--TTGA--GGAAGATAATTGAACAACTTAT--TT----T-C--AGCAACT-----------AGA--T--T---T--------TT--AACAAA---T--------A
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            50698 62 +     63517 AAAA-------A--GA--AA--TTGA--GGAAGATAATTGAACAACTTAT--TT----T-C--AGCATCT-----------AGA--T--T---T--------TT--AACAAA---C--------A
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        75941 62 +    116806 AAAA-------A--GA--AA--TTGA--GGAAGATAATTGAACAACTTAT--TT----T-C--AGCAACT-----------AGA--T--T---T--------TT--AACAAA---C--------A
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     28963 62 -     33031 AAAA-------A--GA--AA--TTGA--GGAAGATAATTGAACAACTTAT--TT----T-C--AGCAACT-----------AGA--T--T---T--------TT--AACAAA---T--------A
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3083223 60 -   3498232 aa--a-a----a--ga--aa--ttga--ggaagataatTGAACAACTTAC--TC----T-C--AGCAAc-------------ga--t--t---t--------tt--aagaaa---c--------a
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    10458 35 +     22452 ---------------------------------------------TTTAT--TC----T-T--AGCAACT-----------AGA--T--T---TTTT-----TT--TTTACC---C--------C
i Lepus_americanus.LepAme_scaffold_62849                I 26 I 2
s Lipotes_vexillifer.KE558548.1                            133858 62 +   3060487 aa--a-a----a--ga--aa--ttga--ggACAATAATTGAGCAACTTAC--TC----T-C--AGCAACT-----------AGA--T--T---T--------TT--AAGAAG---C--------A
i Lipotes_vexillifer.KE558548.1                         C 0 I 2
s Lophocebus_aterrimus.ctg55                             19245052 62 +  19376315 AAAA-------A--GT--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            8086 62 +     84689 GAAA-------A--GA--AA--TTGA--GGAAGATAATTAAACAACTTAT--TT----C-C--AGCAACT-----------AGA--T--T---T--------TT--GACAAA---C--------A
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3775837 62 +   6799190 GAAA-------A--GA--AA--TTGA--GGAAGATAATTAAACAACTTAT--TT----C-C--AGCAACT-----------AGA--T--T---T--------TT--GACAAA---C--------A
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20588697 65 -  62548349 aaag-------a--gA--TA--CTGA--GGAAGATAATTGACCAACTTAT--TC----T-A--AGCAGCT-----------AGA--T--t---t--------tt--aagaagcaaa--------a
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11084580 62 +  39895028 aa--a-a----a--ga--aa--ttga--ggatgataATTGAACAACTTAC--TC----T-C--AGCAAct-----------aga--t--t---t--------tt--aagaaa---c--------a
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             16739 62 +     74745 AAAA-------A--GT--AA--TTGA--GGAAGATAATTGATCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12703245 62 +  12821369 AAAA-------A--GT--AA--TTGA--GGAAGATAATTGATCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               5341 62 +      6569 AAAA-------A--GT--AA--TTGA--GGAAGATAATTGATCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           43643 62 +     63263 AAAA-------A--GT--AA--TTGA--GGAAGATAATTGATCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_1068107                               12219 62 +     12679 AAAA-------A--GT--AA--TTGA--GGAAGATAATTGATCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                1792 62 +      3017 AAAA-------A--GT--AA--TTGA--GGAAGATAATTGATCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---T--------A
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  43404 62 -     79256 AAAA-------A--GT--AA--TTGA--GGAAGATAATTGATCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196032322 62 + 196197964 aaaa-------a--gt--aa--ttga--GGAAGATAATTGATCAACTTAT--TC----T-C--AACAACT-----------AGC--T--t---t--------tt--aacaaa---c--------a
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11442428 62 +  11645122 aaaa-------a--gt--aa--ttga--GGAAGATAATTGATCAACTTAT--TC----T-C--AACAACT-----------AGC--t--t---t--------tt--aacaaa---c--------a
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   2351 62 -     46448 AAAA-------A--GT--AA--TTGA--GGAAGATAATTGATCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                2182 62 -      3617 AAAA-------A--GT--AA--TTGA--GGAAGATAATTGATCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 12514 62 -     55006 AAAA-------A--GT--AA--TTGA--GGAAGATAATTGATCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---T--------A
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43837551 62 +  43892939 AAAA-------A--GT--AA--TTGA--GGAAGATAATTGATCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                4773 62 -      5978 AAAA-------A--GT--AA--TTGA--GGAAGATAATTGATCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               2356 62 -     27140 AAAA-------A--GT--AA--TTGA--GGAAGATAATTGATCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                699482 53 +    802869 AA---------A--AA--AA---TGA--GGAAGATAATTTAGCAACTTAC--TC----T-C--AGCAGTT-----------ATA--T--T---T--------TT--AA-----------------
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 I 2
s Mandrillus_leucophaeus.scaffold125                     43434212 62 -  43563597 AAAA-------A--GT--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4447038 62 -   4543643 AAAA-------A--GT--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            143968 62 +    252755 aa--a-a----a--ga--aa--ttta--ggAAGATAATTGAGCAACTTAC--TC----C-T--AATGAct-----------aga--g--t---t--------tt--aaaaaa---c--------a
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             34043 62 +     58827 aa--a-a----a--ta--aa--ttta--ggaagataACTGAGCAACTTAC--TC----C-T--AACGact-----------aga--g--t---t--------tt--aaaaaa---c--------a
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36871282 64 +  64221397 aa-a-------C--GA--AA--TTGT--GGAAGATAATTGAGAAACTTAT--TC----T-C--AGCAAGC-----------AGA--T--T---T-----Ctttt--aacaaa---c--------a
i Marmota_marmota.CZRN01000005.1                        C 0 I 2
s Megaderma_lyra.MegLyr_scaffold_3562                       62117 64 -    234502 AA---------AAAGA--GA--TTAA--GAAAGATAATTGAGCAATTTGA--TC----T-A--AGCAACT-----------AGA--T--T---T--------TT--AAGAAA---T------AGA
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 I 1
s Mellivora_capensis.MelCap_flattened_line_1828            226497 62 -    226874 AA-------AAA--GA--AA--TTGA--GGAAGATAATTGGACAACTTAT--TC----T-C--AGCAACT-----------AGA--T--T---T--------TT--AAGAAA---C--------A
i Mellivora_capensis.MelCap_flattened_line_1828         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233                9397 61 +     15977 -A-A-------T--GA--AA--TTAA--ACAAGATAATTGAGCAACTTAT--CC----A-C--AGCAACC-----------AGA--T--T---TTTT-----TTAAAACA---------------
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1044186 58 -  26018355 -aaa-------t--ga--aa--ttga--ACAAGATAATTGAGCAACTTAT--TC----T-C--AGCCACC-----------AGA--T--T---TT-------TG--CACA---------------
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_183284                   1558 62 +      2166 AA-------AAA--GA--AA--TTGA--GGACAATAATTGAGCAACTTAC--TC----T-C--AGCAACT-----------AGA--T--T---T--------TT--AAGAAG---C--------A
i Mesoplodon_bidens.MesBid_scaffold_183284              C 0 I 2
s Microcebus_murinus.CM007691.1                          16507573 62 +  47401472 aaaa-------a--ga--aa--ttga--ggAAGATAATTGAACAACTTAT--TT----T-C--AGCAACT-----------AGA--T--t---t--------tt--aacaaa---c--------a
i Microcebus_murinus.CM007691.1                         C 0 I 4
s Microgale_talazaci.MicTal_scaffold_34660                  28890 29 -     48017 ----------------------------------------------TTTT--TC----T-A--AATCACT-----------AGA--C--T---T--------TT--AGAAAG-------------
i Microgale_talazaci.MicTal_scaffold_34660              I 78 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               20545 62 -     32043 AA-------AAA--GA--AA--TTGA--GGAAGATAATTGAGCAGCTTAC--TC----T-C--AGCAACC-----------AGA--T--T---T--------TT--AAGAAA---T--------A
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22817303 58 -  98408828 -TGA-------T--GA--AA--TTGA--ACAAGATAATTGAGCAACTTAT--CC----T-C--AGCAACC-----------AGA--T--T---TT-------TT--AACA---------------
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8207302 62 +  10048721 ga--a-a----a--ga--aa--ttga--ggaagataatTGACCAACTTAC--TC----T-C--AGCAACc-----------aga--t--t---t--------tt--aagaga---g--------a
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            31973 62 +     45743 GA-------AAA--GA--AA--TTGA--GGAAGATAATTGACCAACTTAC--TC----T-C--AGCAACC-----------AGA--T--T---T--------TT--AAGAGA---G--------A
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        32871 62 +     34273 AAAA-------A--GT--AA--TTGA--GGAAGATAATTGAGCAACCTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         8526 60 -    104932 AA-------AAA--GA--AA--TTGA--GGAAGATAATTGAACAACTTAC--TC----T-C--AGCAAC-------------GA--T--T---T--------TT--AAGAAA---C--------A
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     2978 62 +      8497 AAAA-------A--GA--AA--TTGA--GGAAGATAATTGAACAACTTAT--TT----T-C--AGCAACT-----------AGA--T--T---T--------TT--AACAAA---C--------A
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 144285 62 +    154973 AA-------AAA--GA--AA--TTGA--GGACAATAATTGAGCAAATTAC--TC----T-C--AGCTACT-----------AGA--T--T---T--------TT--AAGAAG---C--------A
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 I 2
s Mormoops_blainvillei.MorMeg_scaffold_2952                159058 62 +    265003 AA-------AAA--GA--AA--TTGA--GGAAGATAATTTAGCAGCTTAC--TC----T-C--AGCAACC-----------AGG--T--T---T--------TT--AAGAAA---T--------A
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 2467 62 -      4346 AA-------AAA--GA--AA--TTGA--GCACAATAACTGAATAACTTAG--TC----T-C--AGCAACT-----------AGA--T--T---T--------TT--AGGAAA---C--------A
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 I 2
s Mungos_mungo.MunMun_flattened_line_8729                  142148 62 -    168139 AA-------AAA--GA--AA--TTGA--GAAAGATAATTGAACAACTTAC--TC----T-C--AGCAACT-----------GGA--T--A---T--------TT--AAGAAA---C--------A
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          16943 66 -    100666 AA-------AAA--GA--AA--TTGA--GGCAGATAATTGAGCAGCTTAC--TC----TTC--AGCAACC-----------AGA--T--T---T--------TT--TAGAAA---T-----ACAA
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70763785 34 +  92629107 -aaa-------t--ga--aa--ttaa--acaagATATTTGAACAACTTAT---------------------------------------------------------------------------
i Mus_caroli.LT608236.1                                 C 0 I 13
s Mus_musculus.chr16                                     75486848 34 +  98207768 -aaa-------t--ga--aa--ttga--ACAAGATATTTGAACAACTTAT---------------------------------------------------------------------------
i Mus_musculus.chr16                                    C 0 I 13
s Mus_pahari.LT608305.1                                  67553010 57 +  89017189 -aaa-------t--ga--aa--ttga--acaagataattgaaCAACTTAT--CC----T-C--AGCAACC-----------AGA--T--T---T--------TT--AACG---------------
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74328023 34 +  97876770 -aaa-------t--ga--aa--ttga--aCAAGATATTTGAACAACTTAT---------------------------------------------------------------------------
i Mus_spretus.CM004110.1                                C 0 I 13
s Muscardinus_avellanarius.MusAve_scaffold_9643              8579 65 +     98495 AACA-------A--GA--AA--TTGT--GGAAGATAACTGAGAAACTTAT--TA----T-C--AGCAAGT-----------AGA--T--T---TGTT-----TT--AACACA---T--------A
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 I 2
s Mustela_putorius.JH417978.1                             4421389 62 -  28371801 aa--a-a----a--ga--aa--ttga--ggaagataatTGGACAACTTAT--TC----T-C--AGCAAct-----------aga--t--t---t--------tt--aagaaa---c--------a
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     87518 60 -    117718 AAAA-------C--AA--AA--CC----AG-AGATAATTGAGCTATTTAG--TC----C-G--AGAAACT-----------AGT--T--T---ATTT----GCT--ACCAA--------------
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               965264 67 +   8389877 aa--a-a----a--ga--aa--ttga--ggaagataatTGAGCAGCTTAC--TC----CTC--AGCAACC-----------aga--t--t---t--------tt--tagaaa---taa----aaa
i Myotis_brandtii.KE161952.1                            I 23 C 0
s Myotis_davidii.KB114863.1                               5016950 71 +   6462685 aa--a-a----a--ga--aa--ttga--ggaagataatTGAGCAGCTTAC--TC----CTC--AGCAACC-----------aga--t--t---t--------tt--tagaaa---taatttttta
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3462850 67 -   3747815 aa--a-a----a--ga--aa--ttga--ggaagataatTGAGCAGCTTAC--TT----CTC--AGCAACC-----------aga--t--t---t--------tt--tagaaa---taa----aaa
i Myotis_lucifugus.GL429887.1                           I 23 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         8043 69 +     66751 AA-------AAA--GA--AA--TTGA--GGAAGATAATTGAGCAGCTTAC--TC----CTC--AGCAACC-----------AGA--T--T---T--------TT--TAGAAA---T--AATTTTA
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             2926 62 -      8794 AAAA-------A--GA--AA--TTGA--GAAGGATAATTGACCAAGTATT--TC----T-A--AGCAACT-----------AGA--T--T---T--------TT--AAGAAG---C--------A
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            107909 59 +    362372 aaaa-------t--ga--aa--ttga--agaagataattGAGCAACCTAT--TT----T-C--AGCAACT-----------AGA--T--T---TT-------TT--AACA---------------
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               5250 62 +     48152 AAAA-------G--GT--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4482126 60 -  14209539 aa--a-a----a--ga--aa--ttga--ggaagataatTGAACAACTTAC--TC----T-C--AGCAAC-------------Ga--t--c---t--------tt--aagaaa---c--------a
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3948896 62 -   4490290 aa--a-a----a--ga--aa--ttga--ggACAATAATTGAGCAAATTAC--TC----T-C--AGCTACT-----------AGA--T--T---T--------TT--AAGAAG---C--------A
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 I 2
s Noctilio_leporinus.NocLep_scaffold_12062                  47176 58 +     94413 -----------A--GA--AA--TTGA--AGAAGATAATTGAAAAGCTTAC--TC----T-C--AGCAATC-----------AGA--T--T---T--------TT--AAGAAA---T--------A
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1439838                            122 62 +      3718 AAAA-------A--GT--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Nomascus_annamensis.k141_1439838                      n 141 C 0
s Nomascus_concolor.k141_49591                                345 62 +      2014 AAGA-------A--GT--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Nomascus_concolor.k141_49591                          C 0 C 0
s Nomascus_gabriellae.k141_906566                            1675 62 -      2544 AAGA-------A--GT--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_1444                              91 66 -      7988 AAAA-------A--GT--AAAATTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGCTTT--T---T--------TT--AACAAA---C--------A
i Nomascus_siki_b.tarseq_1444                       n 62 I 367
s Nomascus_siki_a.k141_844529                                  1424 62 +      2124 AAGA-------A--GT--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Nomascus_siki_a.k141_844529                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                27573 62 +   3668941 aa--a-a----a--ga--aa--ttga--ggatgataATTGAACAACTTAC--TC----T-C--AGCAAcc-----------aga--t--t---t--------tt--aagaaa---c--------a
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65564434 62 -  95554990 GAAA-------A--GA--AA--TTGA--GGAAGATAATTGAACAACTTAT--TT----C-T--AGCAACT-----------AGA--T--T---T--------TT--GACAAA---C--------A
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            1279 62 +      6470 GAAA-------A--GA--AA--TTGA--GGAAGATAATTGAACAACTTAT--TT----C-C--AGCAACT-----------AGA--T--T---T--------TT--GACAAA---C--------A
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65666804 62 +  89412551 GAAA-------A--GA--AA--TTGA--GGAAGATAATTGAACAACTTAT--TT----C-C--AGCAACT-----------AGA--T--T---T--------TT--GACAAA---C--------A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4993414 63 -  23139505 caaa-------a--ga--aa--ttga--ggaagatAGTTGACCAACTTAT--TC----T-C--AGCAAAT-----------AGA--T--A---CTTT-----TA---TAGTG---C---------
i Ochotona_princeps.JH802095.1                          C 0 I 1
s Odobenus_rosmarus.KB229369.1                             676779 62 -   3126709 aa--a-a----a--ga--aa--ttga--ggaagataatTGAACAACTTAC--TC----T-C--AGCAAct-----------aga--t--t---t--------tt--aagaaa---c--------a
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1077595 62 +   1425656 aa--a-a----a--ga--aa--ctga--gCACAATAAGTGAATAACTTAG--TC----T-C--AGCAGCT-----------AGA--T--T---T--------TT--AGGAAA---C--------A
i Odocoileus_virginianus.KZ101650.1                     I 6 I 2
s Okapia_johnstoni.LVCL01S0017931.1                         34751 62 +     78940 aa--a-a----a--ga--aa--ttga--gCACAATAACTGAATAACTTAG--TC----T-C--AGCAACT-----------AGa--t--t---t--------tt--aggaaa---c--------a
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 I 2
s Ondatra_zibethicus.OndZib_scaffold_6821                  122579 58 +    145789 -AGA-------T--GA--AA--TTGA--ACAAGATAATTGAGCAACTTAT--CC----T-C--AGAAACC-----------AGA--T--T---TT-------TT--AACA---------------
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  34329 62 +     62360 -AAA-------T--GA--AA--TTGA--ACAAGATAATTGAGCAACTTAT--CC----T-C--AGCAACC-----------AGA--T--T---TTTTTT---TT--AACA---------------
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7222582 62 -   7562323 aa--a-a----a--ga--aa--ttga--ggACAATAATTGAGCAAATTAC--TC----T-C--AGCTACT-----------AGA--T--T---T--------TT--AAGAAG---C--------A
i Orcinus_orca.KB316965.1                               C 0 I 2
s Orycteropus_afer.OryAfe_flattened_line_13509              40957 62 -     66828 AAAA-------A--GA--TT--TGGG--GGAAGATACTTTACCAGCTTAT--TC----T-A--AGTGGCT-----------AGA--T--T---T--------TC--AAGAAG---C--------A
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141873116 33 + 163896628 ---------------------------------------------CTTAT--TC----T-T--Agcaact-----------aga--t--t---t------tt-t--tttatc---c--------a
i Oryctolagus_cuniculus.CM000803.1                      I 26 I 2
s Otocyon_megalotis.JAEUCK010005121.1                      304912 62 -    505867 aa--a-a----a--ga--aa--ttga--ggatgataATTGAACAACTTAC--TC----T-C--AGCAAct-----------aga--t--t---t--------tt--aagaaa---c--------a
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       36433 59 +     38679 aaaa-------a--ga--aa--TTGA--GGAGGATAATTGAACAACTTAC--TT----C-C--AGCAACT-----------AGA--T--T---C--------TT-----AAA---C--------C
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18005874 60 -  38779656 aaaa-------a--ga--aa--ttga--ggaggATAATTGAACAACTTAC--AT----C-C--AGCAACT-----------aga--t--t---c--------tt-----aaa---ca-------t
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134075170 62 - 275406953 aa--a-a----a--ga--aa--ctga--gCACAATAACTGAATAACTTAG--CC----T-C--AGCAACT-----------AGA--T--T---T--------TT--AGGAAA---C--------A
i Ovis_aries.CM001582.2                                 I 59 I 2
s Ovis_canadensis.OviCan_scaffold_6251                      76384 62 +    140051 AA-------AAA--GA--AA--CTGA--GCACAATAACTGAATAACTTAG--CC----T-C--AGCAACT-----------AGA--T--T---T--------TT--AGGAAA---C--------A
i Ovis_canadensis.OviCan_scaffold_6251                  I 59 I 2
s Pan_paniscus.CM003386.1                               127571928 36 - 205426864 -----------------------------------------GCAACTTAT--TC----T-C--AACAACT-----------AGC--T--t---t--------tt--aacaaa---c--------a
i Pan_paniscus.CM003386.1                               I 26 C 0
s Pan_troglodytes.NBAG03003562.1                            10358 62 +     18198 aaaa-------a--gt--aa--ttga--ggAAGATAATTGAGCAACTTAT--TC----T-T--GACAACT-----------AGC--T--t---t--------tt--aacaaa---c--------a
i Pan_troglodytes.NBAG03003562.1                        I 655 I 1654
s Panthera_onca.PanOnc_flattened_line_1615                  31607 62 +    295523 AA-------AAA--GA--AA--TTGA--GAAAGATAATTGAACAACTTAC--TC----T-C--AGCAACT-----------GGA--T--T---T--------TT--AAGAAA---C--------A
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3635208 62 +  18214204 aa--a-a----a--ga--aa--ttga--gaaagataATTGAACAACTTAC--TC----T-C--AGCAACt-----------gga--t--t---t--------tt--aagaaa---c--------a
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5024989 62 -   6340057 aa--a-a----a--ga--aa--ttga--gaaagataATTGAACAACTTAC--TC----T-C--AGCAACt-----------gga--t--t---t--------tt--aagaaa---c--------a
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1064031 62 -   1292953 aa--a-a----a--ga--aa--ctga--gCACAATAACTGAATAACTTAG--CC----T-C--AGCAACT-----------AGa--t--t---t--------tt--aggaaa---c--------a
i Pantholops_hodgsonii.KE114631.1                       C 0 I 2
s Papio_anubis.CM001492.2                               188152996 62 - 188283584 aaaa-------a--gt--aa--ttga--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--t---t--------tt--aacaaa---c--------a
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            49208 62 +     76494 AAAA-------A--GT--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47510393 62 +  47705337 AAAA-------A--GT--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 64370 62 -    104429 AAAA-------A--GT--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  14161 62 -     29451 AAAA-------A--GT--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                34564 62 +     35859 AAAA-------A--GT--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    112909 62 -    135482 AA-------AAA--GA--AA--TTGA--GAAAGATAATTGAACAACTTAC--TC----T-C--AGCAACT-----------GGA--T--T---C--------TT--AAGAAA---C--------A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 I 63 C 0
s Perodicticus_ibeanus.k141_117958                           2484 61 -     23713 GAAA-------A--GA--AA--TTGA--GGAAGATAATTGAATAACTTAT--TT----T-C--ATCGACT-----------AGA--T--T---T--------TT--CACAAA---C---------
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            21782 61 -     27972 GAAA-------A--GA--AA--TTGA--GGAAGATAATTGAATAACTTAT--TT----C-C--ATTAACT-----------AGA--T--T---T--------TT--CACAAA---C---------
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      40377 62 -     45160 AAAA-------T--AA--AA--TTGG--GGAAGATAATTGAACAGCTT-T--TC----T-C--AGCAACC-----------AGA--C--T---TT-------TT--AACAAA---C--------A
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 I 2
s Peromyscus_maniculatus.KI615518.1                       4947507 60 -   8017169 -aaa-------t--ga--aa--ttgA--ACAAGATAATTGAGCAACTTAT--CC----T-C--Agcaacc-----------aga--t--t---t-----ttttt--aaca---------------
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                     9683 67 -     36578 AAAA-------C--AA--AA--CTGA--AG-AGATAATTAAGCAATTT-T--TC----T-C--AGCAGCT-----------AGG--T--T---TTCTTTT-GTT--AACAAA---C--------A
i Petromus_typicus.PetTyp_scaffold_33007                C 0 I 2
s Phocoena_phocoena.PhoPho_flattened_line_11948            119198 62 -    122454 AA-------AAA--GA--AA--TTGA--GGACAATAATTGAGCAAATTAC--TC----T-C--AGCTACT-----------AGA--T--T---T--------TT--AAGAAG---C--------A
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 I 2
s Piliocolobus_badius.k141_1497351                           2254 62 -      3310 AAAA-------A--GT--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       22159 62 -     82327 AAAA-------A--GT--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           18906 62 +     19957 AAAA-------A--GT--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26736920 62 +  26888534 aaaa-------a--gt--aa--ttga--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--t---t--------tt--aacaaa---c--------a
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            94037 40 +    112873 AA-------AAA--GA--AA--TTGA--GGAATATAATTGAGCAGCTTAC--TC----TTC----------------------------------------------------------------
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 I 23
s Pithecia_albicans.k141_991845                             40902 63 -     61926 AAAA-------AA-GG--AA--CTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---G--------A
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        22331 63 +     78826 aaaa-------AA-GG--AA--CTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---G--------A
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              6282 63 -     15800 AAAA-------AA-GG--AA--CTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---G--------A
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                         9480 63 -     16101 AAAA-------AA-GG--AA--CTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---G--------A
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          2789 63 +      9673 aaaa-------AA-GG--AA--CTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---G--------A
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13471783 63 -  19735023 AAAA-------AA-GG--AA--CTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---G--------A
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           10691 63 -     31692 AAAA-------AA-GG--AA--CTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---G--------A
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           3266 62 +     21690 AA-------AAA--GA--AA--TTGA--GGACAATAATTGAGCAACTTAC--TC----T-C--AGCAACT-----------AGA--T--T---T--------TT--AAGAAG---C--------A
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 I 2
s Plecturocebus_bernhardi.k141_959214                       20128 62 +     44506 aaaa-------A--GG--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        20338 62 +     67491 aaaa-------A--GG--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      10579 62 -     98129 AAAA-------A--GG--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     20184 62 +    147771 aaaa-------A--GG--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        20434 62 -     23762 AAAA-------A--GG--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                           900 62 -     55515 AAAA-------A--GG--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         20253 62 +    152463 aaaa-------A--GG--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      7013 62 +      8943 aaaa-------A--GG--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                          9973 62 +    134592 aaaa-------A--GG--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          20563 62 -     75465 AAAA-------A--GG--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----C-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              184446 62 -    373494 aaaa-------a--gt--aa--ttga--GGAAGATAACTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--t---t--------tt--aacaaa---c--------a
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19804353 62 +  19899266 AAAA-------A--GT--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               2492 62 -     15069 AAAA-------A--GT--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              2626 62 +     14865 AAAA-------A--GT--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                73787 63 +     78963 AAGA-------A-TGA--TA--TTGA--GGAAGATAATTGTCCAACTTAT--TC----T-A--AGTAGCT-----------CGG--T--T---T--------TT--AAGAAG---A--------A
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 I 6
s Prolemur_simus.MPIZ01000048.1                           6845828 63 +  12164890 aaaa-------a--ga--aa--ttga--gaaagatAATTGAACAACTTAT--TT----T-C--AGCAACT-----------AGA--T--t---t--------tt-taacaaa---c--------a
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    664446 62 -   2312742 NNNN-------N--NN--NN--NNNN--NNNNNNNNNNNNNNNNNNNNNN--NN----N-N--NNNNNNN-----------NNN--N--N---N--------NN--NNNNNN---N--------N
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                          974 62 +     11805 aaaa-------a--ga--aa--tTGA--GGAAGATAATTGAACAACTTAT--TT----T-C--AGCAACT-----------AGA--T--T---T--------TT--AACAAA---C--------A
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           40309 62 +     52369 aaaa-------a--ga--aa--tTGA--GGAAGATAATTGAACAACTTAT--TT----T-C--AGCAACT-----------AGA--T--T---T--------TT--AACAAA---C--------A
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         32697 62 -     44753 AAAA-------A--GA--AA--TTGA--GGAAGATAATTGAACAACTTAT--TT----T-C--AGCAACT-----------AGA--T--T---T--------TT--AACAAA---C--------A
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            14618 62 +     27322 aaaa-------a--ga--aa--tTGA--GGAAGATAATTGAACAACTTAT--TT----T-C--AGCAACT-----------AGA--T--T---T--------TT--AACAAA---C--------A
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       14258 62 -     53241 AAAA-------A--TA--AA--CTGA--GGAAGATAATTGAACAACTTAT--TT----T-C--AGCAACT-----------AGA--T--T---T--------TT--AACAAA---C--------A
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         36530 62 -     48185 AAAA-------A--GA--AA--TTGA--GGAAGATAATTGAACAACTTAT--TT----T-C--AGCAACT-----------AGA--T--T---T--------TT--AACAAA---C--------A
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           30937 61 +     77221 -a-a-------t--ga--aa--ttaa--acaaGATAATTGAGCAATTTAT--CC----A-C--Agcaacc-----------aga--t--t---t-----ttttttaaaca---------------
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            1724 62 -     27784 aa--a-a----a--ga--aa--ttga--agacaataATTGAGCAGCTTAC--TC----T-C--AGCAAcc-----------aga--t--t---t--------tt--aagaaa---t--------a
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        243482 62 -    344369 AA-------AAA--GA--AA--TTGA--GGAAGATAATTGGACAACTTCT--TC----T-C--AGCAACT-----------AGA--T--T---T--------TT--AAGAAA---C--------A
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13243852 64 -  17261082 aa---------a--aagaaa--ttga--ggaagataaTTGAGCAACTTAC--TC----T-C--AGcaatt-----------aga--t--t---t--------tt--aagaaa---ca------ga
i Pteropus_alecto.KB031157.1                            C 0 I 1
s Pteropus_vampyrus.KN525959.1                             601805 64 -   3946241 aa---------a--aagaaa--ttga--ggaagataaTTGAGCAACTTAC--TC----T-C--AGcaatt-----------aga--t--t---t--------tt--aagaaa---ca------ga
i Pteropus_vampyrus.KN525959.1                          C 0 I 1
s Puma_concolor.QAVW01000427.1                          131531571 62 - 161321710 aa--a-a----a--ga--aa--ttga--gaaagataATTGAACAACTTAC--TC----T-C--AGCAACt-----------gga--t--t---t--------tt--aagaaa---c--------a
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             26617 62 +     56732 AAAA-------G--GT--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6803108 62 +   6970761 AAAA-------G--GT--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             2501 62 +     18040 AAAA-------G--GT--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                13673 62 +     68503 AA-------AAA--GA--AA--CTGA--GCACAATAACTGAATAACTTAG--TC----T-C--AGCAGCT-----------AGA--T--T---T--------TT--AGGAAA---C--------A
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 I 2
s Rattus_norvegicus.chr11                                13912908 55 +  90463843 -aaa-------t--ga--aa--ttgc--ACAAGATAATTGAATAACTTAT--CC----T-C--AGCAAAC-----------AGA--T--T---T--------TT--A--G---------------
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1785658 67 +   2252614 aa---------aaaga--aa--ttga--ggaagataATTGAGCAAGTTAA--TC----T-C--AGCAACT-----------Aga--t--t---t--------tt--gagaaa---caa---aaaa
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           13054 62 -     14454 AAAA-------G--GT--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206374380 62 - 206558726 aaaa-------g--gt--aa--tTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--t---t--------tt--aacaaa---c--------a
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44852028 62 -  45163003 AAAA-------G--GT--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                17154 63 +    109198 AA---------A--AAGAAA--TTGA--GGAAGATAA-TGAGCAACTTAA--TC----T-C--AGCAATT-----------AGA--T--T---T--------TT--AAGAAA---C------AGA
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 I 1
s Saiga_tatarica.SaiTat_scaffold_82192                       5479 62 +     12214 AA-------AAA--GA--AA--TTGA--GCACAATAACTGAATAACTTAG--CC----T-C--AGCAACT-----------AGA--T--T---T--------TT--AGGAAA---C--------A
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 I 2
s Saimiri_boliviensis.NW_024100938.1                     15670016 62 -  43202129 aaaa-------a--gg--aa--ttga--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--t--t---t--------tt--aacaaa---c--------a
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        1883 62 +     34089 aaaa-------A--GG--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              1824 62 -     60842 AAAA-------A--GG--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              1919 62 +     67014 aaaa-------A--GG--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              1897 62 +     60816 aaaa-------A--GG--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 1834 62 -     76454 AAAA-------A--GG--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17338345 62 -  30362882 AAAA-------A--GG--AA--TTGG--GGGAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAaa---c--------a
i Sapajus_apella.ctg10                                  C 0 I 226
s Sapajus_macrocephalus.k141_966464                         17944 62 -     62485 AAAA-------A--GG--AA--TTGG--GGGAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   29235 34 -    114521 AA-------AAA--GA--AA--TTGA--GGAACATAATTGAGCATCTT----T------------------------------------------------------------------------
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 I 24
s Semnopithecus_entellus.k141_1527475                       25042 62 +     26421 AAAA-------A--AT--AA--TTGA--CGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       5502 62 +     20762 AAAA-------A--GT--AA--TTGA--CGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         39237 62 +     40653 AAAA-------A--GT--AA--TTGA--CGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                            9794 62 -     12194 AAAA-------A--GT--AA--TTGA--CGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     23216 62 -     27512 AAAA-------A--AT--AA--TTGA--CGAAGATAATTGAGCAACTTAT--TC----T-C--AGCAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         32235 62 -     33692 AAAA-------A--GT--AA--TTGA--CGAAGATAATTGAGCAACGTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   97129 59 -    120886 -AAA-------T--GA--AA--TAGA--ACAAGATAATTGAGTAAGTTAT--CC----T-C--AGCAACC-----------AGA--T--T---TTT------TT--AACA---------------
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            15877 58 +    739146 AA---------A--GA--AA--TTGA--GGAAGATAATTGAGAAACAT----TC----C-C--ATCAACA-----------AGG--T--T---T--------TT--AAGACA---C--------A
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17748083 49 -  27805282 AA---------A--GA--AA--ATGA--GGTTGATATCTGGGGAAGTT--ACTC----T-CAGA--AACT-----------ACA--T--T-----------------------------------
i Sorex_araneus.JH798170.1                              I 2 I 10
s Spermophilus_dauricus.KZ294190.1                        2237358 64 +   2842873 aa-a-------C--GA--AA--TTGT--GGAAGATAATTGAGAAACTTAT--TC----T-C--AGCAAGC-----------AGA--T--T---T-----Ctttt--aacaaa---c--------a
i Spermophilus_dauricus.KZ294190.1                      C 0 I 2
s Spilogale_gracilis.SpiGra_flattened_line_905             232249 62 -    276980 AA-------AAA--GA--AA--TTGG--GGAAGATAATTGGACAACTTAT--TA----T-C--AGCAACT-----------AGA--T--T---C--------TT--AAGAAA---C--------A
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            24812 62 +     62062 AA-------AAA--GA--AA--TTGA--GAAAGATAATTGAACAACTTAC--TC----T-C--AGCAACT-----------GGA--T--A---T--------TT--AAGAAA---C--------A
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189269724 60 + 218635234 aa--a------a--ga--aa--ttga--gGACAATAACTGAGCAATTTCC--TC----T-T--AGCAACT-----------Agg--t--t---t--------tt--aaggga---a---------
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        12172 62 -  13920577 AAAA-------A--GT--AA--TTGA--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Symphalangus_syndactylus.tarseq_24                    I 221 I 33
s Tadarida_brasiliensis.TadBra_scaffold_145589               3669 62 -      6213 AA-------AAA--GA--AA--TTGA--GGAAGATAATTGAGCAACTTAC--TC----T-G--AGCAACC-----------AGA--T--T---T--------CT--AAGAAA---T--------A
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 I 24
s Tamandua_tetradactyla.TamTet_scaffold_26877               12599 62 +     45698 AAAA-------A--GA--AA--TTGA--GAAGGATAATTGACCAAGTTTT--TC----T-A--AGCAGCT-----------AGA--T--T---T--------TT--AAGAAT---C--------A
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      804600 62 +   1148477 AA-------AAA--GG--AA--TTGA--GGAGGATAATTGAGCAACTTAC--TG----T-C--AACAACT-----------AGA--T--C---T--------TT--AAGAAA---C--------A
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  55261 62 +     99546 AA-------AAA--GG--AA--TTGA--GGAGGATAATTGAGCAACTTAC--TG----T-C--AACAACT-----------AGA--T--C---T--------TT--AAGAAA---C--------A
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               23915 27 +     42269 gaaa-------a--ga--aa--taga--ggaagacaatagaG-----------------------------------------------------------------------------------
i Tarsius_lariang.k141_609102                           C 0 I 21
s Tarsius_wallacei.k141_48636                               57231 27 +     65473 gaaa-------a--ga--aa--taga--ggaagataatagaG-----------------------------------------------------------------------------------
i Tarsius_wallacei.k141_48636                           C 0 I 21
s Theropithecus_gelada.CM009951.1                       194004532 62 - 194193292 aaaa-------a--gt--aa--ttga--GGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--t---t--------tt--aacaaa---c--------a
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             36759 67 -     47444 AAAA-------C--AA--AA--TTGG--AG-AGATGAATGAGCAGTTT-T--TC----T-C--AGCAACT-----------AGG--T--T---TTCTTTT-GTT--AACAAA---C--------A
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 I 2
s Tolypeutes_matacus.TolMat_scaffold_269431                  1479 62 +      6782 AAAA-------A--GA--AA--TTGA--TGAGGATAATTGACCAACTTAT--TC----T-A--AGCAACT-----------GGA--T--T---T--------TT--AAGAAG---C--------A
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  133736 62 -    259118 AA-------AAA--GA--AA--TTGA--GGAAGATAATTGAGCAGCTTAC--TC----T-C--AGCAACC-----------AGA--C--T---T--------TT--AAGCAA---T--------A
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        23612 62 +     38948 AAAA-------A--GT--AA--TTGA--CGAAGATAATTGAGCAACTTAT--TC----T-C--AACAGCT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   17339 62 -     32910 AAAA-------A--GT--AA--TTGA--TGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       23237 62 +     24652 AAAA-------A--GT--AA--TTGA--CGAAGATAATTGAGCAACTTAT--TC----T-C--AACAGCT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      2115 62 -      3559 AAAA-------A--GT--AA--TTGA--TGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           40061 62 -     54611 AAAA-------A--GT--AA--TTGA--CGAAGATAATTGAGCAACTTAC--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       16059 62 +     17312 AAAA-------A--GT--AA--TTGA--CGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    23423 62 -     25040 AAAA-------A--GT--AA--TTGA--TGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          2084 62 +      3528 AAAA-------A--GT--AA--TTGA--TGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  48451 62 +     51589 AAAA-------A--GT--AA--TTGA--TGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       11627 62 +     14732 AAAA-------A--GT--AA--TTGA--CGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       2104 62 -     28054 AAAA-------A--GT--AA--TTGA--TGAAGATAATTGAGCAACTTAT--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44656899 62 -  44834318 AAAA-------A--GT--AA--TTGA--TGAAGATAATTGAGCAACTTAT--TC----T-T--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        1909 62 +      3372 AAAA-------A--GT--AA--TTGA--CGAAGATAATTGAGCAACTTAC--TC----T-C--AACAACT-----------AGC--T--T---T--------TT--AACAAA---C--------A
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   3071 62 +     90398 AA-------AAA--GA--TA--TTGA--GCACAATAACTGAACAGCTTAC--TC----T-C--AGCAACT-----------AGA--T--T---T--------TT--AAGAAA---C--------A
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 I 2
s Trichechus_manatus.JH594618.1                          16079176 62 +  31416278 atga-------a--ga--tA--TTGA--GGAAGATAATTGACCAACTTAT--TC----T-A--AGCAGCt-----------aga--t--t---t--------tt--aagaag---a--------a
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2789578 57 -   3938065 -aaa-------a--ga--aa--tgga--ggaagataATTGGAGAACTTTT--TC----T-C--AGCAACt-----------aga--t--t---t--------tt--aa-------c--------a
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    2098 57 +     13056 -AAA-------A--GA--AA--TTGA--GGAAGATAATTGGGGAACTTAT--TC----T-C--AGCAACT-----------AGA--T--T---T--------TT--AA-------C--------A
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69311301 62 -  96451834 aa--a-a----a--ga--aa--ttga--ggACAATAATTGAGCAAATTAC--TC----T-C--AGCTACT-----------AGA--T--T---T--------TT--AAGAAG---C--------A
i Tursiops_truncatus.MRVK01000923.1                     C 0 I 2
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 24423 34 -     25548 AA-------AAA--GA--AA--TTGA--GGAAGATAATTGAGCAACTT----T------------------------------------------------------------------------
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 I 24
s Ursus_maritimus.KK498671.1                              6512040 33 +  28682327 aa--a-a----a--ga--aa--ttga--ggaagataatTGAACAACTT-----------------------------------------------------------------------------
i Ursus_maritimus.KK498671.1                            C 0 I 25
s Varecia_rubra.k141_432109                                  2670 62 -     20643 AAAA-------A--GA--AA--TTGA--GAAAGATAATTGAACAACTTAT--TT----T-C--AGCAGCT-----------AGA--T--T---T--------TT--AACAAA---C--------A
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             22214 62 -     33872 AAAA-------A--GA--AA--TTGA--GAAAGATAATTGAACAACTTAT--TT----T-C--AGCAGCT-----------AGA--T--T---T--------TT--AACAAA---C--------A
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1522533 53 -   2331223 -----------a--ga--aa--ttga--ggaCAATAACTGAGCAGCTTAC--TC----A-C--AGTAACT-----------AGA--T--T---T--------GC--AAC----------------
i Vicugna_pacos.KN269600.1                              I 1 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                134980 62 -    281493 AA-------AAA--GA--AA--TTGA--GGATGATAATTGAACAACTTAC--TC----T-C--AGCAACT-----------AGA--T--T---T--------TT--AAGAAA---C--------A
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       124488 32 -    134049 ------------------------------------------------AT--TC----T-C--AGCAAGC-----------AGA--T--T---TCTT-----TT--AACAAT---C--------A
i Xerus_inauris.XerIna_scaffold_7898                    I 30 I 2
s Zalophus_californianus.ZalCal_flattened_line_4097        211508 62 -    227762 aa--a-a----A--GA--AA--TTGA--GGAAGATAATTGAACAACTTAC--TC----T-C--AGCAACT-----------AGA--T--T---T--------TT--AAGAAA---C--------A
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     12694 63 -     20485 AGAA-------T--GA--AA--TGAA--GGAAGATAATTGAGCCACTTAT--TC----T-C--AGAAACG-----------AGA--T--C---TT-------TT--AGCTAA---G--------A
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 I 5
s Ziphius_cavirostris.ZipCav_flattened_line_127025           4800 62 -      8775 aa--a-a----a--ga--aa--tTGA--GGACAATAATTGAGCAACTTAC--TC----T-C--AGCAACT-----------AGA--T--T---T--------TT--AGGAAG---C--------A
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 I 2
e Octodon_degus.JH651621.1                                3680632 1579 +  10294119 I

a score=0.000000
s hg38.chr4_GL000008v2_random                                9220 29 +    209709 GA-----A-A---AGT-GCACTA-AA-AAT-ACTGCCT-AGTT
s Acinonyx_jubatus.LLWD01000356.1                         2031293 27 +   3721120 -------a-a---aat-gctcTG-AA-AAT-ACTCTCT-GATT
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    109878 26 -    189883 ---------C---AAT-GCATTC-A-AAAT-ACTCCTT-AGGT
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10654613 29 +  23371972 ga-----a-a---aat-gcacTG-AA-AAT-ACTGTCT-GGTT
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 25 C 0
s Ailurus_fulgens.LNAC01000003.1                          7091339 29 -  16596857 ga-----a-a---aat-gcacTA-GA-AAT-ACTGTCT-GGTT
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   10313 26 -     22067 ---------A---AAT-GCATTC-A-AAAT-GCTCTCC-AATT
i Allactaga_bullata.AllBul_scaffold_70162               I 8 C 0
s Allenopithecus_nigroviridis.k141_3103707                  60234 29 +     61638 GA-----A-A---GAT-GCACTA-AA-AAT-ACTGCTT-AGTT
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        52042 29 +     53391 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCTT-AGTT
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         2767 29 +     72529 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCTT-AGTT
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          2342 29 +      3797 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCTT-AGTT
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             7522 29 -     18050 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  8633 29 -     11521 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              8199 29 -     21359 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1856473                                6576 29 +      7227 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Alouatta_juara.k141_1856473                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          7490 29 -     10438 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            4146 29 +      7047 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             7432 29 +     10410 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            1235 29 -      4927 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             4163 29 +      6429 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3518065 25 +   4113121 -------------AAT-GCACTGAAA-AAT-ACTGTCG-AGT-
i Ammotragus_lervia.NIVO01013474.1                      I 2 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      388246 23 -    631301 --------------AT-GCACTG-AA-AGT-ACAGTGC-TGT-
i Anoura_caudifer.AnoCau_scaffold_422                   I 1 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            28667 25 +     33004 -------------AAT-GCACTGAAA-AAT-ACTGTCG-AGT-
i Antilocapra_americana.AntAmePen_scaffold_42841        I 2 C 0
s Aotus_azarae.k141_3170768                                 59890 29 +     78111 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            2817 29 +     22701 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGTCT-ACTT
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5746775 29 +   9889416 ga-----a-a---aat-gcacTA-AA-AAT-ACTGCCT-ACTT
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             3360 29 -    104377 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-ACTT
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               3366 29 +     23246 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-ACTT
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     1382 26 +      5067 ---------A--AGAT-CCATTA-A--AAT-GCTCTCT-TGCT
i Aplodontia_rufa.AprRuf_scaffold_156013                I 2 C 0
s Arctocebus_calabarensis.k141_1161114                      15351  7 +     17483 -----------------------------------TTT-TTTT
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 6631 28 -     29036 -A-----A-A---AAT-GCACAG-AA-AGT-ACAGTGT-AGTT
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9536628 29 +  39197703 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             57912 29 +     85812 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 8911 29 +     89302 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             13416 29 -     58268 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             61407 29 +    119057 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               3358 29 -     25888 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 4109 29 -     16375 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTC
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                               429 29 +      2719 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26378081 25 +  51448160 -------------AAT-GCACTG-AA-AAT-GCTGTCT-AGTT
i Balaenoptera_acutorostrata.KI537095.1                 I 2 C 0
s Balaenoptera_bonaerensis.DF502048.1                        3312 25 -     13118 -------------AAT-GCACTG-AA-AAT-GCTGTCT-AGTT
i Balaenoptera_bonaerensis.DF502048.1                   I 2 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   41163 25 -     72089 -------------AAT-GCACTGAAA-ACT-ACTGTCG-AGT-
i Beatragus_hunteri.BeaHun_scaffold_21644               I 2 C 0
s Bison_bison.KN264915.1                                  6557172 25 +   6870073 -------------AAT-GCACAGAAA-AAT-ACTGTCG-AGT-
i Bison_bison.KN264915.1                                I 2 C 0
s Bos_indicus.CM003021.1                                138137411 25 - 161108492 -------------aat-gcacagaaa-aat-aCCGTCN-AGT-
i Bos_indicus.CM003021.1                                I 2 C 0
s Bos_mutus.JH883513.1                                     569785 25 -    998990 -------------aat-gcacagaaa-aat-aCCGTCA-AGT-
i Bos_mutus.JH883513.1                                  I 2 C 0
s Bos_taurus.CM000177.6                                 136293144 25 - 158972876 -------------aat-gcacagaaa-aat-aCCGTCG-AGT-
i Bos_taurus.CM000177.6                                 I 2 C 0
s Bubalus_bubalis.KI419065.1                              1228900 25 -   1914593 -------------aat-gcatagaaa-aat-aCTGTCA-AGT-
i Bubalus_bubalis.KI419065.1                            I 2 C 0
s Cacajao_ayresi.k141_724503                               111251 29 -    171031 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 10277 29 +    125063 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                12325 29 -    216513 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        4865 29 -    134917 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3217494 29 -   8989139 -A-----A-A---AAT-GCACTG-AAAAAT-ATTGCCT-AGCT
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           395198 29 -  15254737 -A-----A-A---AAT-GCACTG-AAAAAT-ATTGCCT-AGCT
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2970932 29 +   6889770 -A-----A-A---AAT-GCACTG-AAAAAT-ATTGCCT-AGCT
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11515996 29 +  39901454 GA-----A-A---AAT-CTGCTG-AA-AAT-ACCGTCT-GGTT
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   11014 29 +     87036 GA-----A-A---AAT-CTGCTG-AA-AAT-ACCGTCT-GGTT
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11262657 29 -  35597290 ga-----a-a---aat-ctgctG-AA-AAT-ACCGTCT-GGTT
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11085186 29 +  39895921 ga-----a-a---aat-ctgctG-AA-AAT-ACCGTCT-GGTT
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16452210 29 -  44759192 ga-----a-a---aat-ctgctG-AA-AAT-ACCGTCT-GGTT
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21323170 25 + 157394656 -------------AAT-GCACTGAAA-AAT-ACTGTCG-AGT-
i Capra_aegagrus.CM003214.1                             I 2 C 0
s Capra_hircus.CM004562.1                               135704397 25 - 157403528 -------------AAT-GCACTGAAA-AAT-ACTGTCG-AGT-
i Capra_hircus.CM004562.1                               I 2 C 0
s Capromys_pilorides.CapPil_scaffold_4058357                  188 24 +       236 ---------A---AGT-GCATTA-A--AAT-CCTCCCT-TGC-
i Capromys_pilorides.CapPil_scaffold_4058357            C 0 C 0
s Carlito_syrichta.NW_007248099.1                          306482 29 +    345090 GA-----C-A---AAT-GCACTA-AA-AAT-ACTGCTT-AGTT
i Carlito_syrichta.NW_007248099.1                       I 21 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               57429 29 +     67245 -A-----AAA---AAT-GCACTG-AA-AGT-ACAGTGT-AGTT
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   27917 28 +     33760 ---------A-AAAAT-GCATTA-A-AATT-ACTCTCA-AGTT
i Castor_canadensis.CasCan_scaffold_47037               I 2 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   156725 27 -    276539 -------A-A---AAT-GCAGTG-AA-AAT-ACTGTCT-AGTT
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15784085 24 -  24422027 ---------A---AGT-GTATTA-A--GAT-ATTTCCT-TGC-
i Cavia_aperea.AVPZ01000278.1                           I 2 C 0
s Cavia_porcellus.DS562889.1                             15796017 24 -  24440124 ---------A---AGT-GTATTA-A--GAT-ATTTCCT-TGC-
i Cavia_porcellus.DS562889.1                            I 2 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       174208 24 +    436027 ---------A---AGT-GTATTA-A--GAT-ATTTCCT-TGC-
i Cavia_tschudii.CavTsc_scaffold_488                    I 2 C 0
s Cebus_albifrons.Contig22                               18888103 29 -  29618158 GA-----A-A---AAC-GCACTA-AA-AAT-ACTGCCT-AGTT
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 5647 29 -     26817 GA-----A-A---AAC-GCACTA-AA-AAT-ACTGCCT-AGTT
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                 9890 29 +     25043 GA-----A-A---AAC-GCACTA-AA-AAT-ACTGCCT-AGTT
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         5519 29 +     21754 GA-----C-A---AAT-ACACTA-AA-AAT-ACTGCTT-AGTT
i Cephalopachus_bancanus.k141_702587                    I 21 C 0
s Ceratotherium_simum.JH767818.1                          4361223 29 +   7569818 ga-----a-a---aat-gccCTG-AA-AAT-ACTGTCT-AGTT
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623          978 29 -      9338 GA-----A-A---AAT-GCCCTG-AA-AAT-ACTGTCT-AGTT
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6552026 29 +   6739814 ga-----a-a---aat-gcacTA-AA-AAT-ACTGCTT-AGTT
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      53503 29 -     54931 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCTT-AGTT
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         18487 29 -     19697 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCTT-AGTT
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         56018 29 -    107033 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCTT-AGTT
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        2463 29 -      3853 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCTT-AGTT
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          26396 29 +     30494 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCTT-AGTT
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           2420 29 -      4022 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCTT-AGTT
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          2313 29 -      3505 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCTT-AGTT
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           21103 29 +     35983 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCTT-AGTT
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11987639 29 +  12117833 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCTT-AGTT
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46474392 29 +  46592721 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCTT-AGTT
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      32219 29 +     33420 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCTT-AGTT
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        2255 29 -      3443 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCTT-AGTT
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      3246 29 -      4669 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCTT-AGTT
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        3041 29 -      4411 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCTT-AGTT
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         2571 29 -      4205 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCTT-AGTT
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_1070855           780 29 -      1715 AA-----A-C---AAT-GGACTA-AA-AAT-ACTGTCT-AGTT
i Chaetophractus_vellerosus.ChaVel_scaffold_1070855     C 0 C 0
s Cheirogaleus_major.k141_1157592                           56414 29 -     68416 GA-----A-A---AAT-GCACTA-AA-AAT-AATGCCT-AGTT
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            5460 29 +     13308 GA-----A-A---AAT-GCACTA-AA-AAT-AATGCCT-AGTT
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             2925 29 -     18223 GG-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             19948 29 +     25473 GG-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           38987 29 +     57117 GG-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          43662 29 +     54541 GG-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15959254 24 +  43084221 ---------A---AGT-GAATTA-A--AGT-ACttcct-tgc-
i Chinchilla_lanigera.JH721867.1                        I 2 C 0
s Chiropotes_israelita.k141_1189915                         68472 29 +    196370 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          12653 29 +     40510 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15135853 29 -  15256731 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCTT-AGTT
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      30899 29 -     53260 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCTT-AGTT
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101141348 29 + 101219884 ga-----a-a---aat-gcacTA-AA-AAT-ACTGCTT-AGTT
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                14386 26 -     21363 AA-----A-C---AAT-GGACTA-AA-AAT-ACTGTCT----C
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           759696 26 +    964067 aa-----a-c---aat-ggaCTA-AA-AAT-ACTGTCT----C
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_141308              6489 30 -     12508 -TAA---A-A---AAT-GCACTA-AA-AAC-ACTGTTT-ACTA
i Chrysochloris_asiatica.ChrAsi_scaffold_141308         C 0 C 0
s Colobus_angolensis.KN985967.1                          10879927 29 +  10971483 ga-----a-a---aat-gcacTA-AA-AAT-ACTGCCT-AGTT
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147661085 29 + 156195979 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            13072 29 +     23629 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60610684 29 +  78930452 ga-----a-a---aat-gcaaag-aa-aat-attgtGT-AGTT
i Condylura_cristata.JH655880.1                         I 24 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         37143 26 -     40477 ---------A---AAT-ACAAAG-AA-AAT-ACTGTCT-AGTT
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     I 1 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 274968 26 -    399297 ---------C---AAT-GCATTC-A-AACT-ACTCCTT-GGTT
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53026503 26 +  72327488 ---------C---AAT-GCATTC-A-AAAT-ACTCCCT-AGTT
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             17627 31 -     19186 AAA---TA-A---AAT-ATAGTA-AC-AAT-ACTGTGT-AGTT
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            49304 27 -     70449 -------A-A---AAT-GCTCTG-AA-AAT-ACTCCCT-GATT
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  205672 26 -    956709 ---------A--AAAT-ACATTA-T--AGTCAATT-CT-AATA
i Ctenodactylus_gundi.CteGun_scaffold_447               I 12 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 28044 13 -     67205 ---------------------------AAT-CCTTCCT-TGC-
i Ctenomys_sociabilis.CteSoc_scaffold_19489             I 17 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                14862 24 +     26546 ---------A---AGT-GTATTA-A--GGT-ACTTCCT-TGC-
i Cuniculus_paca.CunPac_flattened_line_16637            I 2 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             56342 24 -    236241 ---------A---AGT-GTATTA-A--GGC-ACTTCCT-TGC-
i Dasyprocta_punctata.DasPun_flattened_line_634         I 2 C 0
s Dasypus_novemcinctus.JH568778.1                          179589 29 -   6883506 AA-----A-C---AAT-GGACTA-AA-AAT-GCTGTCT-AGTT
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16842282 29 +  31942871 GA-----A-A---AAT-GTACTA-AA-AAT-ACCATCT-AGTT
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80034765 25 -  96802777 -------------AAT-GCACTG-AA-AAT-GCTGTCT-AGTT
i Delphinapterus_leucas.KZ290064.1                      I 2 C 0
s Desmodus_rotundus.KZ672188.1                           18696740 28 -  18957592 -a-----a-a---aat-gcactg-AA-AGT-ACAGTGT-AGTT
i Desmodus_rotundus.KZ672188.1                          I 10 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 319882 29 +    993696 ga-----a-a---aat-gcacTG-AA-AAT-ACTGTCT-AGTT
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                    524 29 +    151128 GA-----A-A---AAT-GCACTG-AA-AAT-ACTGTCT-AGTT
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   155139 24 +    228994 ---------A---AGT-GAATTA-A--AGT-ACTTCCT-TGC-
i Dinomys_branickii.DinBra_scaffold_1996                I 2 C 0
s Dipodomys_ordii.KN672545.1                              3652886 29 +   4240102 ---------agaaaat-gtatta-a-aatt-actCTCA-AGTA
i Dipodomys_ordii.KN672545.1                            I 2 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 24445 29 +     28912 ---------AGAAAAT-GTATTA-A-AATT-ACTCTCA-AGTA
i Dipodomys_stephensi.DipSte_scaffold_44365             I 2 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                33599 24 -     73477 ---------A---AGT-GTATTA-A--GAT-ATTTTCT-TGC-
i Dolichotis_patagonum.DolPat_scaffold_14102            I 2 C 0
s Echinops_telfairi.AAIY02274224.1                            277 28 +      1655 -a---aaa-g---aat-gcaCAG-AA-TAC-ACTAT---GCCA
i Echinops_telfairi.AAIY02274224.1                      C 0 C 0
s Eidolon_helvum.KE772537.1                                 10119 20 +     24177 ---------a---aat-gcactg-aa-aat-actgt-------
i Eidolon_helvum.KE772537.1                             I 1 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1489428 25 +   1727528 -------------ATT-GCACTGAAA-AAT-AGTGTCG-AGT-
i Elaphurus_davidianus.JRFZ01086400.1                   I 2 C 0
s Elephantulus_edwardii.JH947210.1                        7804179 31 +  15467074 ta---aaa-a---gaa-gccCTG-AA-AAT-ACTGTAG-AGTA
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        237160 26 -    369425 ---------C---AAT-GCATTC-A-AAAT-ACTccct-agtt
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           4173 26 -      7838 ---------C---AAT-GCATTC-A-AAAT-ACTccct-agtt
i Ellobius_talpinus.LOJH01090055.1                      I 26 C 0
s Enhydra_lutris.KZ291749.1                              85869068 29 +  99434291 ga-----a-a---aat-gcacTG-GA-AAT-ACTGTCT-GGTT
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4701699 28 +   6522550 -N-----N-N---AAT-GCACTG-AA-AGTA-CCGTCT-AGTT
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5850605 29 -   7175178 GA-----A-A---AGT-GCACTG-AA-AAT-ACTGTCT-AGTT
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13349107 29 +  41866177 GA-----A-A---AGT-GCACTG-AA-AAT-ACTGTCT-AGTT
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          10597 29 +     92910 GA-----A-A---AGT-GCACTG-AA-AAT-ACTGTCT-AGTT
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11530404 30 +  16010500 ga-----a-a---cattcCACTG-AA-AAC-ACCATGT-AGTT
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48768031 29 -  48907691 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCTT-AGTT
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          312967 25 +    330699 -------------AAT-GCACTG-AA-AAT-GCTGTCT-AGTT
i Eschrichtius_robustus.EscRob_flattened_line_685       I 2 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             59397 25 +     89355 -------------AAT-GCACTG-AA-AAT-GCTGTCT-ACTT
i Eubalaena_japonica.EubJap_flattened_line_7756         I 2 C 0
s Eulemur_albifrons.k141_715837                              2463 29 +     13586 GA-----A-A---AAT-GCACTA-AA-AAT-ATTGCTT-AGTT
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               2398 29 -      6809 GA-----A-A---AAT-GCACTA-AA-AAT-ATTGCTT-AGTT
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             8871 29 +     36558 GA-----A-A---AAT-GCACTA-AA-AAT-ATTGCTT-AGTT
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             5187 29 +     60246 GA-----A-A---AAT-GCACTA-AA-AAT-ATTGCTT-AGTT
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 8675 29 +    109717 GA-----A-A---AAT-GCACTA-AA-AAT-ATTGCTT-AGTT
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               13049 29 +     16540 GA-----A-A---AAT-GCACTA-AA-AAT-ATTGCTT-AGTT
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                13325 29 +     27497 GA-----A-A---AAT-GCACTA-AA-AAT-ATTGCTT-AGTT
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           15787 29 +     26808 GA-----A-A---AAT-GCACTA-AA-AAT-ATTGCTT-AGTT
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                30515 29 +     46535 GA-----A-A---AAT-GCACTA-AA-AAT-ATTGCTT-AGTT
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              13238 29 -     29447 GC-----A-A---AAT-GCACTA-AA-AAT-ATTGCTT-AGTT
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129890270 27 - 159252932 -------a-a---agt-gcTCTG-AA-AAT-ACTCTCT-GATT
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129277345 27 - 158578461 -------a-a---agt-gcTCTG-AA-AAT-ACTCTCT-GATT
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 18479 27 +     52776 -------A-A---AGT-GCTCTG-AA-AAT-ACTCTCT-GATT
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13890218 24 -  19261668 ---------A---AGT-GCATTA-A--AGt-gcttcct-tgt-
i Fukomys_damarensis.KN123630.1                         I 1 C 0
s Galago_moholi.ctg555                                     208404  4 -    847004 -----------------------------------TTT-T---
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           10785  4 -     43889 -----------------------------------TTT-T---
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           7849  7 +     27357 -----------------------------------TTT-TTTT
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               153739 27 +    324696 -------A-A---AAT-GCACTA-AA-AAT-ACTGTCT-AGTT
i Galeopterus_variegatus.GalVar_scaffold_354            I 2 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    178945 25 -    189561 -------------AAT-GCACTGAAA-ATT-ACTGTCG-AGT-
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 2 C 0
s Glis_glis.GliGli_scaffold_79770                           10143 26 -     18683 ---------A---AAT-GCATTA-A-AAAT-ACTCCCT-AGTT
i Glis_glis.GliGli_scaffold_79770                       I 2 C 0
s Gorilla_beringei.k141_111300                               2620 29 -     14630 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119649719 29 - 195582420 ga-----a-a---aat-gcacTA-AA-AAT-ACTGCCT-AGTT
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   74679 26 +    118900 ---------A---AAT-GCATTA-A-AAAT-ACTCCCT-GGTT
i Graphiurus_murinus.GraMur_scaffold_4493               I 2 C 0
s Hapalemur_alaotrensis.k141_1198205                         3020 29 +      3980 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             25495 29 +     26611 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             2957 29 +     56096 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        26232 29 -     42470 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        42826 29 -     54384 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              14515 27 +     53719 -------G-A---AAT-GCTCTG-AA-AAT-ACTCTCT-GATT
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                25441 25 -     91191 -------------AAC-GCACTGAAA-AAT-ACTGTTG-AGT-
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 2 C 0
s Heterocephalus_glaber.JH602058.1                        2548603 24 +  31725842 ---------A---AGT-GCATTA-A--AGT-ACTTCCT-TGT-
i Heterocephalus_glaber.JH602058.1                      I 2 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               53992 22 +     73687 -----------------GCATTA-AA-AAC-ACTGTCT-AGTA
i Heterohyrax_brucei.HetBruBak_scaffold_25354           I 5 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              145003 25 +    277961 -------------AAT-GCACTG-AA-AAT-ACTGTCT-ATTT
i Hippopotamus_amphibius.HipAmp_scaffold_1308           I 2 C 0
s Hipposideros_armiger.JXIK01001085.1                      276339 28 -    477199 -a-----a-a---aat-gcactG-AA-AAT-ACTGTCT-AGTT
i Hipposideros_armiger.JXIK01001085.1                   I 2 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              5498 28 -      9143 -A-----A-A---AAT-GCACTG-GA-AAT-ACTGTCT-AGTT
i Hipposideros_galeritus.HipGal_scaffold_104691         I 2 C 0
s Hoolock_leuconedys.ctg649                                    99299 29 +    115816 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Hoolock_leuconedys.ctg649                                C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 13580 27 -     67322 -------A-A---AAT-GCTCTG-AA-AAT-ACTCCCT-TATT
i Hyaena_hyaena.HyaHya_flattened_line_20729             I 10 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16504 24 -    119109 ---------A---AGT-GTATTA-A--GAT-ATTTCCT-TGC-
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       I 2 C 0
s Hylobates_abbotti.k141_493872                              2437 29 +      5897 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_282275                               1649 29 +      1846 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Hylobates_agilis.k141_282275                          I 62 C 0
s Hylobates_klossii.k141_584463                               813 29 -      1009 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Hylobates_klossii.k141_584463                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14621982 29 -  25970782 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1133650                            1871 29 -      2775 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             30474 29 -     60944 GA-----A-A---AAT-GCACTA-CA-AAT-ACTGCCT-AGTT
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     3634 24 +     22540 ---------G---AAT-GCATTA-A--AGT-ACTTCCT-TCT-
i Hystrix_cristata.HysCri_scaffold_50788                I 2 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7123508 26 +  13083262 ---------a-a-aat-gcacTA-A--AAT-AGTCTCT-TGCT
i Ictidomys_tridecemlineatus.JH393315.1                 I 2 C 0
s Indri_indri.k141_1884019                                    703 29 -      2196 GA-----A-A---AAT-GCACTA-AA-AAA-ACTGCCT-AGTT
i Indri_indri.k141_1884019                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               6754 25 +     17520 -------------AAT-GCACTG-AA-AAT-GCTGTCT-AGTT
i Inia_geoffrensis.IniGeo_flattened_line_66725          I 2 C 0
s Jaculus_jaculus.JH725517.1                              8563053 26 +  11848649 ---------a---aat-gcattc-a-aaaT-GCTCTCC-AATT
i Jaculus_jaculus.JH725517.1                            I 7 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               21584 24 +     37189 -------------AAT-GCACTG-AA-AAT-G-TGTCT-AGTT
i Kogia_breviceps.KogBre_flattened_line_35920           I 2 C 0
s Lagothrix_lagothricha.k141_12968                          47482 29 -    147782 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   111498 13 -    115756 -A-----A-A---AAT-ACACTG-A------------------
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 I 11
s Lemur_catta.scaffold_1                                258404515 29 - 285822530 GA-----A-A---AAT-GCACTA-AA-ATT-ACTGCCT-AGTT
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        21387 29 +     39228 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            50760 29 +     63517 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        76003 29 +    116806 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     29025 29 -     33031 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3083283 29 -   3498232 ga-----a-g---aat-gcACTG-AA-AAT-ACTGTCT-GGTT
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    10495 26 +     22452 ---------A---AAA-GCACTA-AA-ATT-ACTGTT-CAGTT
i Lepus_americanus.LepAme_scaffold_62849                I 2 C 0
s Lipotes_vexillifer.KE558548.1                            133922 15 +   3060487 -------------------------A-AAT-GCTGTCT-AGTT
i Lipotes_vexillifer.KE558548.1                         I 2 C 0
s Lophocebus_aterrimus.ctg55                             19245114 29 +  19376315 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCTT-AGTT
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            8148  8 +     84689 -----------------------------------TTTCTTTT
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3775899  8 +   6799190 -----------------------------------TTTCTTTT
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20588762 31 -  62548349 aa---aaa-a---aaa-gcccta-aa-aaC-ACTGCCT-AGTA
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11084642 29 +  39895028 ga-----a-a---aat-ctgctG-AA-AAT-ACCGTCT-GGTT
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             16801 29 +     74745 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCC-AGTT
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12703307 29 +  12821369 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCC-AGTT
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               5403 29 +      6569 GA-----A-A---AAT-ACACTA-AA-AAT-ACTGCCC-AGTT
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           43705 29 +     63263 GA-----A-A---AAT-ACACTA-AA-AAT-ACTGCCC-AGTT
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_1068107                               12281 29 +     12679 GA-----A-A---AAT-ACACTA-AA-AAT-ACTGCCC-AGTT
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                1854 29 +      3017 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCC-AGTT
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  43466 29 -     79256 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCC-AGTT
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196032384 29 + 196197964 ga-----a-a---aat-gcacTA-AA-AAT-ACTGCCC-AGTT
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11442490 29 +  11645122 ga-----a-a---aat-gcacTA-AA-AAT-ACTGCCC-AGTT
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   2413 29 -     46448 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCC-AGTT
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                2244 29 -      3617 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCC-AGTT
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 12576 29 -     55006 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCC-AGTT
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43837613 29 +  43892939 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCC-AGTT
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                4835 29 -      5978 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCC-AGTT
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               2418 29 -     27140 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCC-AGTT
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                699537 20 +    802869 ---------A---AAT-GCACTG-AA-AAT-ACTGT-------
i Macroglossus_sobrinus.MacSob_scaffold_879             I 2 C 0
s Mandrillus_leucophaeus.scaffold125                     43434274 29 -  43563597 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCTT-AGTT
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4447100 29 -   4543643 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCTT-AGTT
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            144030 28 +    252755 ga-----a-a---gat-gcACTG-A--AAT-ACTGTCT-AGTT
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             34105 28 +     58827 ga-----a-a---aat-gcactG-A--AAT-ACTGTCT-AGTT
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36871348 26 +  64221397 ---------a-a-aat-gcacTA-A--AAT-AGTCTCT-TGCT
i Marmota_marmota.CZRN01000005.1                        I 2 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       62182 26 -    234502 ---------A---AAT-GCAAAG-AA-AAT-ACTGTCC-AGTG
i Megaderma_lyra.MegLyr_scaffold_3562                   I 1 C 0
s Mellivora_capensis.MelCap_flattened_line_1828            226559 29 -    226874 GA-----A-A---AAT-GCACTG-GA-AAT-ACTGTCT-GGTT
i Mellivora_capensis.MelCap_flattened_line_1828         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233                9458 26 +     15977 ---------C---ATT-GCATTC-A-AAAT-GCTCCCT-GGCT
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1044244 26 -  26018355 ---------C---AAT-GCATTC-A-AAAT-ACTCCCT-AGTT
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_183284                   1622 25 +      2166 -------------AAT-GCACTG-AA-AAT-GCTGTCT-AGTT
i Mesoplodon_bidens.MesBid_scaffold_183284              I 2 C 0
s Microcebus_murinus.CM007691.1                          16507639 25 +  47401472 -------------aat-gcacTG-AA-AAT-ACTGCCT-AGTT
i Microcebus_murinus.CM007691.1                         I 4 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  28919  5 -     48017 -AAA---A-A---------------------------------
i Microgale_talazaci.MicTal_scaffold_34660              C 0 I 11
s Micronycteris_hirsuta.MicHir_scaffold_37978               20607 28 -     32043 -A-----A-A---GAT-TCACTG-AA-AGT-ACAGTGT-AGTT
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22817361 26 -  98408828 ---------C---AAT-GCATTC-A-AAAT-ACTCCCT-AGTT
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8207364 28 +  10048721 -a-----a-a---aat-gcacTA-GA-AGTA-CTGTCT-AGTT
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            32035 28 +     45743 -A-----A-A---AAT-GCACTA-GA-AGTA-CTGTCT-AGTT
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        32933 29 +     34273 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCTT-AGTT
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         8586 29 -    104932 GA-----A-G---AAT-GCACTG-AA-AAT-ACTGTCT-GGTT
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     3040 29 +      8497 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 144349 25 +    154973 -------------AAT-GCACTG-AA-AAT-GCTGTCT-AGTT
i Monodon_monoceros.MonMon_M_scaffold_5598              I 2 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                159120 26 +    265003 -A-----A-A---AAT-GCACTG-A---GT-ACTGTGT-AGTT
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 2531 25 -      4346 -------------AAC-GCACTGAAA-AAT-ACTGTCG-AGT-
i Moschus_moschiferus.MosMos_scaffold_146101            I 2 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  142210 27 -    168139 -------A-A---AAT-GCTCTG-AA-AAT-ACTCTCT-GATT
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          17009 28 -    100666 -A-----A-T---AAT-GCACTG-AA-AGTA-CTGTCT-AGTT
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70763832 26 +  92629107 ---------C---AAT-GCATTC-A-AAAT-ACtccct-agtt
i Mus_caroli.LT608236.1                                 I 13 I 42
s Mus_musculus.chr16                                     75486895 26 +  98207768 ---------C---AAT-GCATTC-A-AAAT-ACTCcct-agtc
i Mus_musculus.chr16                                    I 13 I 18
s Mus_pahari.LT608305.1                                  67553067 26 +  89017189 ---------C---AAT-GCATTC-A-AAAT-ACtccct-aggt
i Mus_pahari.LT608305.1                                 C 0 I 26
s Mus_spretus.CM004110.1                                 74328070 26 +  97876770 ---------C---AAT-GCATTC-A-AAAT-ACTCcct-agtc
i Mus_spretus.CM004110.1                                I 13 I 18
s Muscardinus_avellanarius.MusAve_scaffold_9643              8646 25 +     98495 ---------A---AAT-ACATTA-A--AAT-ACTCCCT-GGTT
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 2 C 0
s Mustela_putorius.JH417978.1                             4421451 29 -  28371801 ga-----a-a---aat-gcacTG-GA-AAT-ACTGTCT-GGTT
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     87578 10 -    117718 ---------A---AGT-GCATTA--------------------
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 I 13
s Myotis_brandtii.KE161952.1                               965331 27 +   8389877 -------a-a---aac-gcACTG-AA-AGTA-CTGTCT-AGTT
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5017021 28 +   6462685 -a-----a-a---aac-gcacTG-AA-AGTA-CTGTCT-AGTT
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3462917 28 -   3747815 -a-----a-a---aac-acactg-aa-agTA-CTGTCT-AGTT
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         8112 28 +     66751 -A-----A-A---AAC-GCACTG-AA-AGTA-CTGTCT-AGTT
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             2988 26 -      8794 AG-----A-C---AAT-GGACTA-AA-AAT-ACTTTCT----C
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            107968 26 +    362372 ---------C---AAT-GCATTC-A-AAAT-actctat-aatt
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               5312 29 +     48152 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4482186 29 -  14209539 ga-----a-g---aat-gcACTG-AA-AAT-ACTGTCT-GGTT
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3948960 25 -   4490290 -------------AAT-GCACTG-AA-AAT-GCTGTCT-AGTT
i Neophocaena_asiaeorientalis.KZ688543.1                I 2 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  47234 28 +     94413 -A-----A-A---ACA-GCACTG-AA-AAT-ATTATGT-AGTT
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1439838                            184 29 +      3718 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Nomascus_annamensis.k141_1439838                      C 0 C 0
s Nomascus_concolor.k141_49591                                407 29 +      2014 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Nomascus_concolor.k141_49591                          C 0 C 0
s Nomascus_gabriellae.k141_906566                            1737 29 -      2544 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             22211 29 -  18771707 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Nomascus_siki_b.tarseq_80                         I 62 C 0
s Nomascus_siki_a.k141_844529                                  1486 29 +      2124 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Nomascus_siki_a.k141_844529                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                27635 29 +   3668941 ga-----a-a---aat-ctgctG-AA-AAT-ACCGTCT-GGTT
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65564496  8 -  95554990 -----------------------------------TTTCTTTT
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            1341  8 +      6470 -----------------------------------TTTCTTTT
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65666866  8 +  89412551 -----------------------------------TTTCTTTT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4993478 27 -  23139505 ---------A---AAC-GCACTG-GA-ATT-ACTGTTACAGTT
i Ochotona_princeps.JH802095.1                          I 1 C 0
s Odobenus_rosmarus.KB229369.1                             676841 29 -   3126709 ga-----a-g---att-gCATTG-AA-AAT-GCTCTCT-GGTT
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1077659 25 +   1425656 -------------ATT-GCactgaaa-aat-actgttg-agt-
i Odocoileus_virginianus.KZ101650.1                     I 2 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         34815 25 +     78940 -------------aat-GCACTGAAA-AAT-ACTGTCG-AGT-
i Okapia_johnstoni.LVCL01S0017931.1                     I 2 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  122637 26 +    145789 ---------C---AAT-GCATTC-A-AAAT-ACTCCCT-AGTT
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  34391 26 +     62360 ---------C---AAT-GCATTC-A-GAAT-GCTCCCT-AGTT
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7222646 25 -   7562323 -------------AAT-GCACTG-AA-AAT-GCTGTCT-AGTT
i Orcinus_orca.KB316965.1                               I 2 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              41019 34 -     66828 AAAAAAAA-A---AAA-GTACTG-AA-AAC-ACTGTCT-AATC
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141873151 26 + 163896628 ---------a---aaA-GCACTA-AA-ATT-ACTGTT-CAGTT
i Oryctolagus_cuniculus.CM000803.1                      I 2 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      304974 29 -    505867 ga-----a-a---aat-ctgctG-AA-AAT-ACCGTCT-GGTT
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       36492  4 +     38679 -----------------------------------TTT-T---
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18005934  4 -  38779656 -----------------------------------ttt-t---
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134075234 25 - 275406953 -------------AAT-GCACTGAAA-AAT-ACTGTCG-AGT-
i Ovis_aries.CM001582.2                                 I 2 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      76448 25 +    140051 -------------AAT-GCACTGAAA-AAT-ACTGTCG-AGT-
i Ovis_canadensis.OviCan_scaffold_6251                  I 2 C 0
s Pan_paniscus.CM003386.1                               127571964 29 - 205426864 ga-----a-a---aat-gcacTA-AA-AAT-ACTGCCT-AGTT
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120149117 29 - 196562556 ga-----a-a---aat-gcacTA-AA-AAT-ACTGCCT-AGTT
i Pan_troglodytes.CM009241.2                            I 62 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  31669 27 +    295523 -------A-A---AAT-GCTCTG-AA-AAT-ACTCTCT-GATT
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3635270 27 +  18214204 -------a-a---aat-gctcTG-AA-AAT-ACTCTCT-GATT
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5025051 27 -   6340057 -------a-a---aat-gctcTG-AA-AAT-ACTCTCT-GATT
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1064095 25 -   1292953 -------------aat-gCACTGAAA-AAC-ACTGTCG-AGT-
i Pantholops_hodgsonii.KE114631.1                       I 2 C 0
s Papio_anubis.CM001492.2                               188153058 29 - 188283584 ga-----a-a---aat-gcacTA-AA-AAT-ACTGCTT-AGTT
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            49270 29 +     76494 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCTT-AGTT
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47510455 29 +  47705337 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCTT-AGTT
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 64432 29 -    104429 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCTT-AGTT
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  14223 29 -     29451 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCTT-AGTT
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                34626 29 +     35859 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCTT-AGTT
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    112971 27 -    135482 -------A-A---AAT-GCTCTG-AA-AAT-ACTCTCT-GATT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           2545  4 -     23713 ---------------------------------------TTTT
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            21843  4 -     27972 ---------------------------------------TTTT
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      40441 29 -     45160 ---------AGAAAAT-GCATGA-A-AATT-ACTGTTG-AGTA
i Perognathus_longimembris.PerPac_flattened_line_22291  I 2 C 0
s Peromyscus_maniculatus.KI615518.1                       4947567 26 -   8017169 ---------c---aat-gcATTC-A-GAAT-ACTccct-agtt
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                     9752 24 -     36578 ---------A---AGT-GCATTA-A--AAT-ACTTCCT-TCT-
i Petromus_typicus.PetTyp_scaffold_33007                I 2 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            119262 25 -    122454 -------------AAT-GCACTG-AA-AAT-GCTGTCT-AGTT
i Phocoena_phocoena.PhoPho_flattened_line_11948         I 2 C 0
s Piliocolobus_badius.k141_1497351                           2316 29 -      3310 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       22221 29 -     82327 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           18968 29 +     19957 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26736982 29 +  26888534 ga-----a-a---aat-gcacTA-AA-AAT-ACTGCCT-AGTT
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            94100 28 +    112873 -A-----A-A---AAT-GCACTG-AA-AGTA-CTGTCT-AGTT
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        I 23 C 0
s Pithecia_albicans.k141_991845                             40965 29 -     61926 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        22394 29 +     78826 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              6345 29 -     15800 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                         9543 29 -     16101 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          2852 29 +      9673 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13471846 29 -  19735023 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           10754 29 -     31692 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           3330 25 +     21690 -------------AAT-GCACTG-CA-AAT-GCTGTCT-AGTT
i Platanista_gangetica.PlaMin_flattened_line_72990      I 2 C 0
s Plecturocebus_bernhardi.k141_959214                       20190 29 +     44506 GG-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        20400 29 +     67491 GG-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      10641 29 -     98129 GG-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     20246 29 +    147771 GG-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        20496 29 -     23762 GG-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                           962 29 -     55515 GG-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         20315 29 +    152463 GG-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      7075 29 +      8943 GG-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                         10035 29 +    134592 GG-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          20625 29 -     75465 GG-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              184508 29 -    373494 ga-----a-a---aat-gcacTA-AA-AAT-ACTGCCT-AGTT
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19804415 29 +  19899266 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               2554 29 -     15069 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              2688 29 +     14865 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                73856 22 +     78963 -----------------GCATTA-AA-AAC-ACTGTCT-AGTA
i Procavia_capensis.ProCapCap_scaffold_15315            I 6 C 0
s Prolemur_simus.MPIZ01000048.1                           6845891 29 +  12164890 ga-----a-a---aat-gcacTA-AA-AAT-ACTGCCT-AGTT
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    664508 29 -   2312742 NN-----N-N---NNN-NNNNNN-NN-NNN-NNNNNNN-NNNN
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         1036 29 +     11805 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           40371 29 +     52369 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         32759 29 -     44753 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            14680 29 +     27322 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       14320 28 -     53241 GA-----A-A---AAT-GCACTA-AA-A-T-ACTGCCT-AGTT
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         36592 28 -     48185 GA-----A-A---AAT-GCACTA-AA-AT--ACTGCCT-AGTT
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           30998 26 +     77221 ---------c---aat-gcATTC-A-AAAT-GCTCCct-agtt
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            1786 28 -     27784 -a-----a-a---aat-gcaccg-AA-AAT-ACTGAGT-AGTT
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        243544 29 -    344369 GA-----A-A---AAT-GCACTG-GA-AAT-ACTGTCT-GGTT
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13243917 20 -  17261082 ---------a---aat-gcacTG-AA-AAT-ACTGT-------
i Pteropus_alecto.KB031157.1                            I 1 C 0
s Pteropus_vampyrus.KN525959.1                             601870 20 -   3946241 ---------a---aat-gcacTG-AA-AAT-GCTGT-------
i Pteropus_vampyrus.KN525959.1                          I 1 C 0
s Puma_concolor.QAVW01000427.1                          131531633 27 - 161321710 -------a-a---aat-gctcTG-AA-AAT-ACTCTCT-GATT
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             26679 29 +     56732 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6803170 29 +   6970761 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             2563 29 +     18040 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                13737 25 +     68503 -------------ATT-GCACTGAAA-AAC-ACTGTTG-AGT-
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 2 C 0
s Rattus_norvegicus.chr11                                13912963 26 +  90463843 ---------C---ACT-GCACTC-A-CAAT-ACTccct-agtt
i Rattus_norvegicus.chr11                               C 0 I 8
s Rhinolophus_sinicus.LVEH01000179.1                      1785725 29 +   2252614 aa-----a-a---aat-gcactg-aa-aAT-ACTGTCT-AGTT
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           13116 29 -     14454 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206374442 29 - 206558726 ga-----a-a---aat-gcacTA-AA-AAT-ACTGCCT-AGTT
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44852090 29 -  45163003 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                17218 20 +    109198 ---------A---AAT-GCACTG-AA-AAT-ACTGT-------
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            I 1 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       5543 25 +     12214 -------------AAT-GCACTGAAA-ATT-ACTGTTG-AGT-
i Saiga_tatarica.SaiTat_scaffold_82192                  I 2 C 0
s Saimiri_boliviensis.NW_024100938.1                     15670078 29 -  43202129 ga-----a-a---aat-gcacTA-AA-AAT-ACTGCCT-AGTT
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        1945 29 +     34089 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              1886 29 -     60842 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              1981 29 +     67014 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              1959 29 +     60816 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 1896 29 -     76454 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17338633 27 -  30362882 GA-----A-A---AAA-AAA--A-AA-AAT-ACTGCCT-AGTT
i Sapajus_apella.ctg10                                  I 226 C 0
s Sapajus_macrocephalus.k141_966464                         18006 29 -     62485 GA-----A-A---AAT-GCACTA-AA-AGT-ACTGCCT-AGTT
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   29293 29 -    114521 GA-----A-A---AAT-GCACAG-AA-AAT-ACTGTGT-GGTT
i Scalopus_aquaticus.ScaAqu_scaffold_9300               I 24 C 0
s Semnopithecus_entellus.k141_1527475                       25104 29 +     26421 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       5564 29 +     20762 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         39299 29 +     40653 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                            9856 29 -     12194 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     23278 29 -     27512 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         32297 29 -     33692 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   97188 26 -    120886 ---------C---AAT-GCATCC-A-AGAT-ACTCCCT-AGTT
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            15935 29 +    739146 TA-----A-A---AAT-GCAATG-AA-AAT-ACTGTGT-AGTT
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17748142 29 -  27805282 AC-----A-A---AAT-GTGATA-AC-AAG-ACTGTAT-TGTT
i Sorex_araneus.JH798170.1                              I 10 C 0
s Spermophilus_dauricus.KZ294190.1                        2237424 26 +   2842873 ---------a-a-aat-gaacta-a--aat-agtCTCT-TGCT
i Spermophilus_dauricus.KZ294190.1                      I 2 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             232311 29 -    276980 GA-----A-A---AAT-GCACTG-GT-TAT-ACTATCT-GGTT
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            24874 27 +     62062 -------A-A---AAT-GCTCTG-AA-AAT-ACTCTCT-GATT
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189269784 29 + 218635234 aa-----a-a---aat-gcactg-aa-aaT-ACTGTCT-AGTT
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                     13899270 29 +  13920577 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Symphalangus_syndactylus.tarseq_24                    I 62 C 0
s Tadarida_brasiliensis.TadBra_scaffold_148405               3550 29 -      6063 -A-----A-A---AAT-GCACTG-AA-AGTAACTGTCT-AGTT
i Tadarida_brasiliensis.TadBra_scaffold_148405          I 198 I 55
s Tamandua_tetradactyla.TamTet_scaffold_26877               12661 26 +     45698 AG-----A-C---AAT-GGACTA-AA-AAT-ACTGTCT----C
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      804662 29 +   1148477 GA-----A-A---AAT-GCACTG-AA-AAC-TCTGTCT-AGTT
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  55323 29 +     99546 GA-----A-A---AAT-GCACTG-AA-AAC-TCTGTCT-AGTT
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               23963 29 +     42269 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCTT-AGTT
i Tarsius_lariang.k141_609102                           I 21 C 0
s Tarsius_wallacei.k141_48636                               57279 29 +     65473 GA-----A-A---AAT-GCACTA-AA-AAT-ATTGCTT-AGTT
i Tarsius_wallacei.k141_48636                           I 21 C 0
s Theropithecus_gelada.CM009951.1                       194004594 29 - 194193292 ga-----a-a---aat-gcacTA-AA-AAT-ACTGCTT-AGTT
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             36828 24 -     47444 ---------A---AGC-GCATTA-A--AAT-ACTTCCT-TCT-
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         I 2 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  1541 29 +      6782 AA-----A-C---AAT-GGACTG-AA-AAT-ACTGTCT-AGTT
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  133798 28 -    259118 -A-----A-A---AGT-GCACTG-AA-AGT-ACTGTGT-AGTT
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        23674 29 +     38948 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   17401 29 -     32910 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       23299 29 +     24652 GA-----A-A---AAT-GCACTA-AA-AAT-ATTGCCT-AGTT
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      2177 29 -      3559 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           40123 29 -     54611 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       16121 29 +     17312 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    23485 29 -     25040 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          2146 29 +      3528 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  48513 29 +     51589 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       11689 29 +     14732 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       2166 29 -     28054 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44656961 29 -  44834318 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        1971 29 +      3372 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTT
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   3135 27 +     90398 ---------A---AAT-GCAAATGAA-AAT-ATTGTCT-AGTT
i Tragulus_javanicus.TraJav_scaffold_14717              I 2 C 0
s Trichechus_manatus.JH594618.1                          16079238 31 +  31416278 aa---aaa-a---aat-gcacga-GA-AAC-ACTGTCT-AGTA
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2789635 29 -   3938065 ga-----a-a---aat-gcaCTA-GA-AAT-ACCATCC-AGTT
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    2155 29 +     13056 GA-----A-A---AAT-GCACTA-GA-AAT-ACCATCT-AGTT
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69311365 25 -  96451834 -------------AAT-GCACTG-AA-AAT-GCTGTCT-AGTT
i Tursiops_truncatus.MRVK01000923.1                     I 2 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 24481 29 -     25548 GA-----A-A--AAAA-GCACAG-AA-AAT-AGTGTGT-GGT-
i Uropsilus_gracilis.UroGra_scaffold_4143_0             I 24 C 0
s Ursus_maritimus.KK498671.1                              6512098 29 +  28682327 ga-----a-a---aat-gcacTG-AA-AAT-ACAGTCT-GGTT
i Ursus_maritimus.KK498671.1                            I 25 C 0
s Varecia_rubra.k141_432109                                  2732 29 -     20643 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTG
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             22276 29 -     33872 GA-----A-A---AAT-GCACTA-AA-AAT-ACTGCCT-AGTG
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1522586 29 -   2331223 -A-----A-A---AAT-GCACTG-AAAAAT-ATTGCCT-AGCT
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                135042 29 -    281493 GA-----A-A---AAT-CTGCTG-AA-AAT-ACCGTCT-GGTT
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       124522 26 -    134049 ---------A--AAAT-GCATTA-A--AAT-AGTCTCT-TGCT
i Xerus_inauris.XerIna_scaffold_7898                    I 2 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        211570 29 -    227762 GA-----A-G---ATT-GCATTG-AA-AAT-ACTCTCT-GGTT
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     12762 26 -     20485 ---------A---AAT-GCATTC-A-AAAT-ACTCTCC-AATC
i Zapus_hudsonius.ZapHud_scaffold_64392                 I 5 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           4864 21 -      8775 -------------AAT-GCACTG-AA-AAT-GCTGTCT-----
i Ziphius_cavirostris.ZipCav_flattened_line_127025      I 2 C 0
e Octodon_degus.JH651621.1                                3680632 1579 +  10294119 I

a score=0.000000
s hg38.chr4_GL000008v2_random                                9249 4 +    209709 G--TT--T
s Acinonyx_jubatus.LLWD01000356.1                         2031320 4 +   3721120 A--TT--T
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    109904 5 -    189883 ---TTTAA
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10654642 4 +  23371972 A--TT--T
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7091368 4 -  16596857 A--TT--T
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   10339 4 -     22067 T--TT--C
i Allactaga_bullata.AllBul_scaffold_70162               C 0 I 1
s Allenopithecus_nigroviridis.k141_3103707                  60263 4 +     61638 G--TT--T
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        52071 4 +     53391 G--TT--T
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         2796 4 +     72529 G--TT--T
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          2371 4 +      3797 G--TT--T
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             7551 4 -     18050 G--TT--T
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  8662 4 -     11521 G--TT--T
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              8228 4 -     21359 G--TT--T
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1856473                                6605 4 +      7227 G--TT--T
i Alouatta_juara.k141_1856473                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          7519 4 -     10438 G--TT--T
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            4175 4 +      7047 G--TT--T
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             7461 4 +     10410 G--TT--T
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            1264 4 -      4927 G--TT--T
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             4192 4 +      6429 G--TT--T
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3518090 1 +   4113121 -------T
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      388269 1 -    631301 -------T
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            28692 1 +     33004 -------T
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 59919 4 +     78111 G--TT--T
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            2846 4 +     22701 G--TT--T
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5746804 4 +   9889416 G--TT--T
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             3389 4 -    104377 G--TT--T
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               3395 4 +     23246 G--TT--T
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     1408 3 +      5067 T---T--C
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      15358 3 +     17483 T--TT---
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 6659 4 -     29036 A--TT--T
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9536657 4 +  39197703 G--TT--T
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             57941 4 +     85812 G--TT--T
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 8940 4 +     89302 G--TT--T
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             13445 4 -     58268 G--TT--T
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             61436 4 +    119057 G--TT--T
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               3387 4 -     25888 G--TT--T
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 4138 4 -     16375 T--TA--T
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                               458 4 +      2719 T--TA--T
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26378106 4 +  51448160 A--TT--T
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        3337 4 -     13118 A--TT--T
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   41188 1 -     72089 -------T
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6557197 1 +   6870073 -------T
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138137436 1 - 161108492 -------T
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     569810 1 -    998990 -------T
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136293169 1 - 158972876 -------T
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1228925 1 -   1914593 -------T
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               111280 4 -    171031 G--TT--T
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 10306 4 +    125063 G--TT--T
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                12354 4 -    216513 G--TT--T
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        4894 4 -    134917 G--TT--T
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3217523 4 -   8989139 A--TT--T
i Camelus_bactrianus.KN276303.1                         C 0 I 8
s Camelus_dromedarius.KN271192.1                           395227 4 -  15254737 A--TT--T
i Camelus_dromedarius.KN271192.1                        C 0 I 8
s Camelus_ferus.KB016973.1                                2970961 4 +   6889770 A--TT--T
i Camelus_ferus.KB016973.1                              C 0 I 8
s CanFam4.chr31                                          11516025 4 +  39901454 A--TT--T
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   11043 4 +     87036 A--TT--T
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11262686 4 -  35597290 A--TT--T
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11085215 4 +  39895921 A--TT--T
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16452239 4 -  44759192 A--TT--T
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21323195 1 + 157394656 -------T
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135704422 1 - 157403528 -------T
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_4058357                  212 4 +       236 T--TT--T
i Capromys_pilorides.CapPil_scaffold_4058357            C 0 N 0
s Carlito_syrichta.NW_007248099.1                          306511 4 +    345090 T--TT--A
i Carlito_syrichta.NW_007248099.1                       C 0 I 1
s Carollia_perspicillata.CarPer_scaffold_4436               57458 4 +     67245 A--TT--T
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   27945 4 +     33760 T--TT--C
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   156752 4 -    276539 A--TT--T
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15784109 4 -  24422027 T--TT--T
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15796041 4 -  24440124 T--TT--T
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       174232 4 +    436027 T--TT--T
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18888132 4 -  29618158 G--TT--T
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 5676 4 -     26817 G--TT--T
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                 9919 4 +     25043 G--TT--T
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         5548 4 +     21754 T--TT--A
i Cephalopachus_bancanus.k141_702587                    C 0 I 1
s Ceratotherium_simum.JH767818.1                          4361252 4 +   7569818 A--TT--T
i Ceratotherium_simum.JH767818.1                        C 0 I 19
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         1007 4 -      9338 A--TT--T
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 I 19
s Cercocebus_atys.KQ010443.1                              6552055 4 +   6739814 G--TT--T
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      53532 4 -     54931 G--TT--T
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         18516 4 -     19697 G--TT--T
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         56047 4 -    107033 G--TT--T
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        2492 4 -      3853 G--TT--T
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          26425 4 +     30494 G--TT--T
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           2449 4 -      4022 G--TT--T
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          2342 4 -      3505 G--TT--T
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           21132 4 +     35983 G--TT--T
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11987668 4 +  12117833 G--TT--T
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46474421 4 +  46592721 G--TT--T
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      32248 4 +     33420 G--TT--T
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        2284 4 -      3443 G--TT--T
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      3275 4 -      4669 G--TT--T
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        3070 4 -      4411 G--TT--T
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         2600 4 -      4205 G--TT--T
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_1070855           809 4 -      1715 A--TT--T
i Chaetophractus_vellerosus.ChaVel_scaffold_1070855     C 0 C 0
s Cheirogaleus_major.k141_1157592                           56443 4 -     68416 T--TA--T
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            5489 4 +     13308 T--TA--T
i Cheirogaleus_medius.k141_133808                       C 0 I 21
s Cheracebus_lucifer.k141_619653                             2954 4 -     18223 G--TT--T
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             19977 4 +     25473 G--TT--T
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           39016 4 +     57117 G--TT--T
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          43691 4 +     54541 G--TT--T
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15959278 4 +  43084221 t--tt--t
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         68501 4 +    196370 A--TT--T
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          12682 4 +     40510 A--TT--T
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15135882 4 -  15256731 G--TT--T
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      30928 4 -     53260 G--TT--T
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101141377 4 + 101219884 G--TT--T
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                14412 4 -     21363 A--TT--T
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           759722 4 +    964067 A--TT--T
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_141308              6519 4 -     12508 A--TT--T
i Chrysochloris_asiatica.ChrAsi_scaffold_141308         C 0 C 0
s Colobus_angolensis.KN985967.1                          10879956 4 +  10971483 G--TT--T
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147661114 4 + 156195979 G--TT--T
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            13101 4 +     23629 G--TT--T
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60610713 4 +  78930452 A--TT--T
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         37169 4 -     40477 A--TT--T
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 274994 4 -    399297 T--TT--A
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53026529 4 +  72327488 T--TT--A
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             17658 4 -     19186 T--TT--T
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            49331 4 -     70449 A--TT--T
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  205698 4 -    956709 T--TT--T
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 28057 4 -     67205 C--TT--T
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 I 23
s Cuniculus_paca.CunPac_flattened_line_16637                14886 4 +     26546 T--TT--T
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             56366 4 -    236241 T--TT--T
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          179618 4 -   6883506 A--TT--T
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16842311 4 +  31942871 T--TT--T
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80034790 4 -  96802777 A--TT--T
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18696768 4 -  18957592 A--TT--T
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 319911 4 +    993696 A--TT--T
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 I 19
s Diceros_bicornis.DicBicMic_scaffold_9545                    553 4 +    151128 A--TT--T
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 I 19
s Dinomys_branickii.DinBra_scaffold_1996                   155163 4 +    228994 T--TT--T
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3652915 2 +   4240102 T--T----
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 24474 2 +     28912 T--T----
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                33623 4 -     73477 T--CT--T
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.AAIY02274224.1                            305 4 +      1655 A--TT--T
i Echinops_telfairi.AAIY02274224.1                      C 0 C 0
s Eidolon_helvum.KE772537.1                                 10139 3 +     24177 ---tt--t
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1489453 1 +   1727528 -------T
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7804210 4 +  15467074 A--TT--T
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        237186 4 -    369425 t--tt--a
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           4199 4 -      7838 t--tt--a
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85869097 4 +  99434291 A--TT--T
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4701727 4 +   6522550 A--TT--T
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5850634 4 -   7175178 A--TT--T
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13349136 4 +  41866177 A--TT--T
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          10626 4 +     92910 A--TT--T
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11530434 4 +  16010500 A--TT--T
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48768060 4 -  48907691 G--TT--T
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          312992 4 +    330699 A--TT--T
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             59422 4 +     89355 A--TT--T
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              2492 4 +     13586 T--TA--T
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               2427 4 -      6809 T--TA--T
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             8900 4 +     36558 T--TA--C
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             5216 4 +     60246 T--TA--T
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 8704 4 +    109717 T--TA--T
i Eulemur_fulvus.k141_653297                            C 0 I 2
s Eulemur_macaco.k141_1341545                               13078 4 +     16540 T--TA--T
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                13354 4 +     27497 T--TA--C
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           15816 4 +     26808 T--TA--T
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                30544 4 +     46535 T--TA--T
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              13267 4 -     29447 T--TA--T
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129890297 4 - 159252932 A--TT--T
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129277372 4 - 158578461 A--TT--T
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 18506 4 +     52776 A--TT--T
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13890242 6 -  19261668 ttttt--t
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     208408 3 -    847004 ---TT--T
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           10789 3 -     43889 ---TT--T
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           7856 4 +     27357 T--TT--T
i Galagoides_demidoff.k141_1769638                      C 0 I 1
s Galeopterus_variegatus.GalVar_scaffold_354               153766 4 +    324696 T--TT--T
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    178970 1 -    189561 -------T
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           10169 4 -     18683 C--TT--T
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               2649 4 -     14630 G--TT--T
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119649748 4 - 195582420 G--TT--T
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   74705 4 +    118900 C--TT--T
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 I 9
s Hapalemur_alaotrensis.k141_1198205                         3049 4 +      3980 T--TA--T
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             25524 4 +     26611 T--TA--T
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             2986 4 +     56096 T--TA--T
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        26261 4 -     42470 T--TA--T
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        42855 4 -     54384 T--TA--T
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              14542 4 +     53719 A--TT--T
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                25466 1 -     91191 -------T
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2548627 5 +  31725842 T-TTT--T
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               54014 4 +     73687 A--TT--T
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 I 1
s Hippopotamus_amphibius.HipAmp_scaffold_1308              145028 4 +    277961 A--TT--T
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      276367 4 -    477199 A--TT--T
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              5526 4 -      9143 A--TT--T
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg649                                    99328 4 +    115816 G--TT--T
i Hoolock_leuconedys.ctg649                                C 0 I 49
s Hyaena_hyaena.HyaHya_flattened_line_20729                 13607 4 -     67322 A--TT--T
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 I 10
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16528 4 -    119109 T--TT--T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              2466 4 +      5897 G--TT--T
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_282275                               1678 4 +      1846 G--TT--T
i Hylobates_agilis.k141_282275                          C 0 C 0
s Hylobates_klossii.k141_584463                               842 4 -      1009 G--TT--T
i Hylobates_klossii.k141_584463                         C 0 I 46
s Hylobates_pileatus_b.ContigUN                                 14622011 4 -  25970782 G--TT--T
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1133650                            1900 4 -      2775 G--TT--T
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             30503 4 -     60944 G--TT--T
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     3658 4 +     22540 T--TT--T
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7123534 4 +  13083262 T--TT--T
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_1884019                                    732 4 -      2196 T--CA--T
i Indri_indri.k141_1884019                              C 0 I 8
s Inia_geoffrensis.IniGeo_flattened_line_66725               6779 4 +     17520 A--TT--T
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8563079 4 +  11848649 T--TT--C
i Jaculus_jaculus.JH725517.1                            C 0 I 1
s Kogia_breviceps.KogBre_flattened_line_35920               21608 4 +     37189 A--TT--T
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          47511 4 -    147782 G--TT--T
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   111522 4 -    115756 A--TT--T
i Lasiurus_borealis.LasBor_scaffold_5102                I 11 C 0
s Lemur_catta.scaffold_1                                258404544 4 - 285822530 T--TA--T
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        21416 4 +     39228 T--TA--T
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            50789 4 +     63517 T--TA--T
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        76032 4 +    116806 T--TA--T
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     29054 4 -     33031 T--TA--T
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3083312 4 -   3498232 A--TT--T
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    10521 4 +     22452 T--TT--C
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            133937 4 +   3060487 A--TT--T
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19245143 4 +  19376315 G--TT--T
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            8156 3 +     84689 T--TT---
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3775907 3 +   6799190 T--TT---
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20588793 4 -  62548349 A--TT--T
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11084671 4 +  39895028 A--TT--T
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             16830 4 +     74745 G--TT--T
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12703336 4 +  12821369 G--TT--T
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               5432 4 +      6569 G--TT--T
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           43734 4 +     63263 G--TT--T
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_1068107                               12310 4 +     12679 G--TT--T
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                1883 4 +      3017 G--TT--T
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  43495 4 -     79256 G--TT--T
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196032413 4 + 196197964 G--TT--T
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11442519 4 +  11645122 G--TT--T
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   2442 4 -     46448 G--TT--T
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                2273 4 -      3617 G--TT--T
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 12605 4 -     55006 G--TT--T
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43837642 4 +  43892939 G--TT--T
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                4864 4 -      5978 G--TT--T
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               2447 4 -     27140 G--TT--T
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                699557 3 +    802869 ---TT--T
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43434303 4 -  43563597 G--TT--T
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4447129 4 -   4543643 G--TT--T
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            144058 4 +    252755 A--TT--T
i Manis_javanica.JSZB01003966.1                         C 0 I 2
s Manis_pentadactyla.KN017078.1                             34133 4 +     58827 A--TT--T
i Manis_pentadactyla.KN017078.1                         C 0 I 2
s Marmota_marmota.CZRN01000005.1                         36871374 4 +  64221397 T--TT--T
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       62208 4 -    234502 A--TT--T
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_1828            226588 4 -    226874 A--TT--T
i Mellivora_capensis.MelCap_flattened_line_1828         C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233                9484 3 +     15977 ---TT--A
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1044270 4 -  26018355 T--CT--A
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_183284                   1647 4 +      2166 A--TT--T
i Mesoplodon_bidens.MesBid_scaffold_183284              C 0 C 0
s Microcebus_murinus.CM007691.1                          16507664 4 +  47401472 T--TA--T
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  28935 4 -     48017 A--TT--T
i Microgale_talazaci.MicTal_scaffold_34660              I 11 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               20635 4 -     32043 A--TT--T
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22817387 4 -  98408828 T--TT--A
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8207392 4 +  10048721 A--TT--T
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            32063 4 +     45743 A--TT--T
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        32962 4 +     34273 G--TT--T
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         8615 4 -    104932 A--TT--T
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     3069 4 +      8497 T--TA--T
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 144374 4 +    154973 A--TT--T
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                159146 4 +    265003 A--TT--T
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 2556 1 -      4346 -------T
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  142237 4 -    168139 T--TT--T
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          17037 4 -    100666 A--TT--T
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70763900 4 +  92629107 t--tt--t
i Mus_caroli.LT608236.1                                 I 42 C 0
s Mus_musculus.chr16                                     75486939 4 +  98207768 t--ct--t
i Mus_musculus.chr16                                    I 18 C 0
s Mus_pahari.LT608305.1                                  67553119 4 +  89017189 t--tt--t
i Mus_pahari.LT608305.1                                 I 26 I 9
s Mus_spretus.CM004110.1                                 74328114 4 +  97876770 t--ct--t
i Mus_spretus.CM004110.1                                I 18 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              8671 4 +     98495 C--TT--C
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4421480 4 -  28371801 A--TT--T
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     87601 4 -    117718 T--TT--T
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 13 C 0
s Myotis_brandtii.KE161952.1                               965358 4 +   8389877 A--TT--T
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5017049 4 +   6462685 A--TT--T
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3462945 4 -   3747815 A--TT--T
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         8140 4 +     66751 A--TT--T
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3014 4 -      8794 A--TT--T
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            107994 4 +    362372 t--ta--a
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               5341 4 +     48152 G--TT--T
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4482215 4 -  14209539 A--TT--T
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3948985 4 -   4490290 A--TT--T
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  47262 4 +     94413 G--TT--T
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1439838                            213 4 +      3718 G--TT--T
i Nomascus_annamensis.k141_1439838                      C 0 C 0
s Nomascus_concolor.k141_49591                                436 4 +      2014 G--TT--T
i Nomascus_concolor.k141_49591                          C 0 C 0
s Nomascus_gabriellae.k141_906566                            1766 4 -      2544 G--TT--T
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             22240 4 -  18771707 G--TT--T
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_844529                                  1515 4 +      2124 G--TT--T
i Nomascus_siki_a.k141_844529                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                27664 4 +   3668941 A--TT--T
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65564504 3 -  95554990 T--TT---
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            1349 3 +      6470 T--TT---
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65666874 3 +  89412551 T--TT---
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4993505 4 -  23139505 T--TT--C
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Odobenus_rosmarus.KB229369.1                             676870 4 -   3126709 A--TT--T
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1077684 1 +   1425656 -------T
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         34840 1 +     78940 -------T
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  122663 4 +    145789 T--TT--A
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  34417 4 +     62360 T--TT--A
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7222671 4 -   7562323 A--TT--T
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              41053 4 -     66828 A--TT--T
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141873177 4 + 163896628 T--TT--C
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      305003 4 -    505867 A--TT--T
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       36496 3 +     38679 ---TT--T
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18005938 3 -  38779656 ---tt--t
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134075259 1 - 275406953 -------T
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      76473 1 +    140051 -------T
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127571993 4 - 205426864 G--TT--T
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120149146 4 - 196562556 G--TT--T
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  31696 4 +    295523 A--TT--T
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3635297 4 +  18214204 A--TT--T
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5025078 4 -   6340057 A--TT--T
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1064120 1 -   1292953 -------T
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188153087 4 - 188283584 G--TT--T
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            49299 4 +     76494 G--TT--T
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47510484 4 +  47705337 G--TT--T
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 64461 4 -    104429 G--TT--T
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  14252 4 -     29451 G--TT--T
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                34655 4 +     35859 G--TT--T
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    112998 4 -    135482 A--TT--T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           2549 3 -     23713 T--TT---
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            21847 4 -     27972 T-TTT---
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      40470 2 -     45160 T--T----
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 I 10
s Peromyscus_maniculatus.KI615518.1                       4947593 4 -   8017169 t--tt--a
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                     9776 4 -     36578 T--TT--T
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            119287 4 -    122454 A--TT--T
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           2345 4 -      3310 G--TT--T
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       22250 4 -     82327 G--TT--T
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           18997 4 +     19957 G--TT--T
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26737011 4 +  26888534 G--TT--T
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            94128 4 +    112873 A--TT--T
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 I 680
s Pithecia_albicans.k141_991845                             40994 4 -     61926 G--TT--T
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        22423 4 +     78826 G--TT--T
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              6374 4 -     15800 G--TT--T
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                         9572 4 -     16101 G--TT--T
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          2881 4 +      9673 G--TT--T
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13471875 4 -  19735023 G--TT--T
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           10783 4 -     31692 G--TT--T
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           3355 4 +     21690 A--TT--T
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       20219 4 +     44506 G--TT--T
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        20429 4 +     67491 G--TT--T
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      10670 4 -     98129 G--TT--T
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     20275 4 +    147771 G--TT--T
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        20525 4 -     23762 G--TT--T
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                           991 4 -     55515 G--TT--T
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         20344 4 +    152463 G--TT--T
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      7104 4 +      8943 G--TT--T
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                         10064 4 +    134592 G--TT--T
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          20654 4 -     75465 G--TT--T
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              184537 4 -    373494 G--TT--T
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19804444 4 +  19899266 G--TT--T
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               2583 4 -     15069 G--TT--T
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              2717 4 +     14865 G--TT--T
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                73878 4 +     78963 A--TT--T
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 I 1
s Prolemur_simus.MPIZ01000048.1                           6845920 4 +  12164890 T--TA--T
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    664537 4 -   2312742 N--NN--N
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         1065 4 +     11805 T--TA--T
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           40400 4 +     52369 T--TA--T
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         32788 4 -     44753 T--TA--T
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            14709 4 +     27322 T--TA--T
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       14348 4 -     53241 T--TA--T
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         36620 4 -     48185 T--TA--T
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           31024 3 +     77221 ---tt--a
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            1814 4 -     27784 A--TT--T
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        243573 4 -    344369 A--TT--T
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13243937 3 -  17261082 ---TT--C
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             601890 3 -   3946241 ---TT--C
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131531660 4 - 161321710 A--TT--T
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             26708 4 +     56732 G--TT--T
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6803199 4 +   6970761 G--TT--T
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             2592 4 +     18040 G--TT--T
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                13762 1 +     68503 -------T
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13912997 4 +  90463843 t--tt--t
i Rattus_norvegicus.chr11                               I 8 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1785754 4 +   2252614 A--TT--T
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           13145 4 -     14454 G--TT--T
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206374471 4 - 206558726 G--TT--T
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44852119 4 -  45163003 G--TT--T
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                17238 3 +    109198 ---TT--T
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 I 3
s Saiga_tatarica.SaiTat_scaffold_82192                       5568 1 +     12214 -------T
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15670107 4 -  43202129 G--TT--T
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        1974 4 +     34089 G--TT--T
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              1915 4 -     60842 G--TT--T
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              2010 4 +     67014 G--TT--T
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              1988 4 +     60816 G--TT--T
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 1925 4 -     76454 G--TT--T
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17338660 4 -  30362882 G--TT--T
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         18035 4 -     62485 G--TT--T
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   29322 4 -    114521 C--TT--T
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1527475                       25133 4 +     26421 G--TT--T
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       5593 4 +     20762 G--TT--T
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         39328 4 +     40653 G--TT--T
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                            9885 4 -     12194 G--TT--T
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     23307 4 -     27512 G--TT--T
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         32326 4 -     33692 G--TT--T
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   97214 4 -    120886 T--TT--T
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            15964 4 +    739146 T--TT--T
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17748171 4 -  27805282 A--TT--T
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2237450 4 +   2842873 T--TT--T
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             232340 4 -    276980 G--TT--T
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            24901 4 +     62062 A--TT--T
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189269813 4 + 218635234 A--TT--T
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                     13899299 4 +  13920577 G--TT--T
i Symphalangus_syndactylus.tarseq_24                    C 0 I 46
s Tadarida_brasiliensis.TadBra_scaffold_145589               3755 4 -      6213 A--TT--T
i Tadarida_brasiliensis.TadBra_scaffold_145589          I 24 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               12687 4 +     45698 A--TT--T
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      804691 4 +   1148477 A--TT--T
i Tapirus_indicus.TapInd_scaffold_176                   C 0 I 10
s Tapirus_terrestris.TapTer_scaffold_14939                  55352 4 +     99546 A--TT--T
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 I 10
s Tarsius_lariang.k141_609102                               23992 4 +     42269 T--TT--A
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               57308 4 +     65473 T--TT--A
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194004623 4 - 194193292 G--TT--T
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             36852 4 -     47444 T--TA--T
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 I 11
s Tolypeutes_matacus.TolMat_scaffold_269431                  1570 4 +      6782 A--TT--T
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  133826 4 -    259118 A--TT--T
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        23703 4 +     38948 G--TT--T
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   17430 4 -     32910 G--TT--T
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       23328 4 +     24652 G--TT--T
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      2206 4 -      3559 G--TT--T
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           40152 4 -     54611 G--TT--T
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       16150 4 +     17312 G--TT--T
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    23514 4 -     25040 G--TT--T
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          2175 4 +      3528 G--TT--T
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  48542 4 +     51589 G--TT--T
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       11718 4 +     14732 G--TT--T
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       2195 4 -     28054 G--TT--T
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44656990 4 -  44834318 G--TT--T
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        2000 4 +      3372 G--TT--T
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   3162 4 +     90398 A--TT--T
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16079269 4 +  31416278 A--TT--T
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2789664 4 -   3938065 T--TT--T
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    2184 4 +     13056 T--TT--T
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69311390 4 -  96451834 A--TT--T
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 24510 4 -     25548 G--TC--T
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6512127 4 +  28682327 A--TT--T
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  2761 4 -     20643 T--TA--T
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             22305 4 -     33872 T--TA--T
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1522615 4 -   2331223 A--TT--T
i Vicugna_pacos.KN269600.1                              C 0 I 23
s Vulpes_lagopus.VulLag_flattened_line_2045                135071 4 -    281493 A--TT--T
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       124548 4 -    134049 T--TT--T
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        211599 4 -    227762 A--TT--T
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     12788 4 -     20485 T--CT--C
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 I 1
s Ziphius_cavirostris.ZipCav_flattened_line_127025           4885 4 -      8775 A--TT--T
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Octodon_degus.JH651621.1                                3680632 1579 +  10294119 I

a score=0.000000
s hg38.chr4_GL000008v2_random                                9253 42 +    209709 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TCCCC--------T--G-------A--G--TG---TC--A--TA--A---A
s Acinonyx_jubatus.LLWD01000356.1                         2031324 48 +   3721120 A-A-ACCAG-CC-T------AA-GATCTGAG--TGTAT--A-TGC--CCT----AT--G-------T--G--Tg---tc--a--ta--g-agg
i Acinonyx_jubatus.LLWD01000356.1                       C 0 I 1
s Acomys_cahirinus.AcoCah_scaffold_1625                    109909 45 -    189883 A-A-GATGT-GC-T------AA-GAC--CAA--CGC----TTTGCCT--TT-T-GT--G-------T--A--TG---TC--A--TA--G---G
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10654646 46 +  23371972 A-A-ACTAT-AC-T------AA-GATCTGAG--TGT----A-TGC--CCT----AT--G-------T--A--tg---tc--a--ta--g-ggg
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 I 1
s Ailurus_fulgens.LNAC01000003.1                          7091372 46 -  16596857 A-A-ACTAG-GC-T------AA-GATCTGAG--TGT----A-CGC--CCT----AT--G-------G--G--Tg---tc--a--ta--g-aga
i Ailurus_fulgens.LNAC01000003.1                        C 0 I 1
s Allactaga_bullata.AllBul_scaffold_70162                   10344 43 -     22067 A-A-GCTGT-GC-T------CA-GACATA----CAC----A-TATCTCAT----AT--G-------T--A--TG---TC--A--TA--G----
i Allactaga_bullata.AllBul_scaffold_70162               I 1 I 1
s Allenopithecus_nigroviridis.k141_3103707                  60267 46 +     61638 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCTC--TG-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        52075 46 +     53391 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCTC--TG-A-GT--G-------G--G--TG---TC--A--TA--A---A
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         2800 46 +     72529 A-A-AGTAG-GC-T------GA-GATCTGAC--TAT----A-TGCTC--TG-A-GT--G-------G--G--TG---TC--A--TA--A---A
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          2375 46 +      3797 A-A-AGTAG-GC-T------GA-GATCTGAT--TGT----A-TGCTC--TG-A-GT--G-------G--G--TG---TC--A--TA--A---A
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             7555 29 -     18050 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCCC----------------------------------------------
i Alouatta_belzebul.k141_1818029                        C 0 I 13
s Alouatta_caraya.k141_5460                                  8666 29 -     11521 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCCC----------------------------------------------
i Alouatta_caraya.k141_5460                             C 0 I 13
s Alouatta_discolor.k141_811576                              8232 29 -     21359 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCCC----------------------------------------------
i Alouatta_discolor.k141_811576                         C 0 I 13
s Alouatta_juara.k141_1856473                                6609 29 +      7227 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCCC----------------------------------------------
i Alouatta_juara.k141_1856473                           C 0 I 13
s Alouatta_macconnelli.k141_1331706                          7523 29 -     10438 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCCC----------------------------------------------
i Alouatta_macconnelli.k141_1331706                     C 0 I 13
s Alouatta_nigerrima.k141_2718643                            4179 29 +      7047 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCCC----------------------------------------------
i Alouatta_nigerrima.k141_2718643                       C 0 I 13
s Alouatta_palliata.k141_1316127                             7465 29 +     10410 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCCC----------------------------------------------
i Alouatta_palliata.k141_1316127                        C 0 I 13
s Alouatta_puruensis.k141_1284840                            1268 29 -      4927 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCCC----------------------------------------------
i Alouatta_puruensis.k141_1284840                       C 0 I 13
s Alouatta_seniculus.k141_990213                             4196 29 +      6429 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCCC----------------------------------------------
i Alouatta_seniculus.k141_990213                        C 0 I 13
s Ammotragus_lervia.NIVO01013474.1                        3518091 48 +   4113121 A-A-ACTAG-GC-T------GA-GATCTGAG--TGT----A-TGC--CCTG-T-GT--G-------T--C--TG---TC--A--TA--GAG-A
i Ammotragus_lervia.NIVO01013474.1                      C 0 I 2
s Anoura_caudifer.AnoCau_scaffold_422                      388270 48 -    631301 A-A-TCAAG-GC-T------AA-GATATAAG--TGT----A-TGC--CCTA-T-GT--G-------T--G--TG---TC--A--TATAG---A
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 I 1
s Antilocapra_americana.AntAmePen_scaffold_42841            28693 47 +     33004 A-A-ACTAG-GC-T------AA-GCTCTGAG--TGT----A-TGC--C-TG-T-GT--G-------T--C--TG---TC--A--CA--GAG-A
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 I 2
s Aotus_azarae.k141_3170768                                 59923 46 +     78111 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCCC--TA-T-GT--G-------A--G--TG---TC--A--TA--A---A
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            2850 46 +     22701 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCCC--TA-T-GT--G-------A--G--TG---TC--A--TA--A---A
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5746808 46 +   9889416 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGTCC--TA-T-GT--G-------C--g--tg---tc--a--ta--a---a
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             3393 46 -    104377 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCCC--TA-T-GT--G-------A--G--TG---TC--A--TA--A---A
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               3399 46 +     23246 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCCC--TA-T-GT--G-------A--G--TG---TC--A--TA--A---A
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     1411 46 +      5067 A-A-ACTGG-GG-A------AA-GATCTGGG--TGT----A-TGTCC--TA-T-GT--G-------T--A--TG---TC--A--GA--G---A
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      15361 44 +     17483 T-A-AGTAG-AC-T------CA-CATCTAAC--TAT----A-TGTCC--TG----T--G-------T--G--TG---TC--A--CA--G---A
i Arctocebus_calabarensis.k141_1161114                  C 0 I 2
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 6663 48 -     29036 A-A-TCAAG-GC-T------AA-GATACAAG--TGT----A-TGC--CTTA-T-GT--A-------T--G--TG---CC--A--TAGAG---A
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 I 1
s Ateles_geoffroyi_b.tarseq_2582                             9536661 46 +  39197703 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCCC--TA-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             57945 46 +     85812 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCCC--TA-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 8944 46 +     89302 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCCC--TA-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             13449 46 -     58268 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCCC--TA-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             61440 46 +    119057 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCCC--TA-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               3391 46 -     25888 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCCC--TA-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 4142 46 -     16375 A-C-ATTAG-AT-T------AA-GATCTGAT--TGT----A-TGTCC--TA-T-GT--G-------T--G--TG---TC--A--TA--G---A
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                               462 46 +      2719 A-C-ATTAG-AT-T------AA-GATCTGAT--TGT----A-TGTCC--TA-T-GT--G-------T--G--TG---TC--A--TA--G---A
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26378110 46 +  51448160 A-A-AGTAG-GC-T------AA-GATCTGAG--TGT----A-TGC--C--G-T-GT--G-------T--G--Tg---tc--a--ta--g-aga
i Balaenoptera_acutorostrata.KI537095.1                 C 0 I 3
s Balaenoptera_bonaerensis.DF502048.1                        3341 46 -     13118 A-A-AGTAG-GC-T------AA-GATCTGAG--TGT----A-TGC--C--G-T-GT--G-------T--G--Tg---tc--a--ta--g-aga
i Balaenoptera_bonaerensis.DF502048.1                   C 0 I 3
s Beatragus_hunteri.BeaHun_scaffold_21644                   41189 46 -     72089 A-A-ACTAG-GC-T------GA-GATCTG----TGT----A-TGC--CCTG-T-GT--G-------T--C--TG---TC--A--TA--GAG-A
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 I 2
s Bison_bison.KN264915.1                                  6557198 48 +   6870073 A-A-ACTAG-GC-T------GA-GATCTGAG--TTT----A-TGC--CCTG-T-GT--G-------T--C--TG---TC--A--TA--GAG-A
i Bison_bison.KN264915.1                                C 0 I 2
s Bos_indicus.CM003021.1                                138137437 48 - 161108492 A-A-ACTAG-GC-T------GA-GATCTGAG--TAT----A-TGC--CCTG-T-GT--G-------T--C--TG---NC--A--TA--GAG-A
i Bos_indicus.CM003021.1                                C 0 I 2
s Bos_mutus.JH883513.1                                     569811 48 -    998990 A-A-ACTAG-GC-T------GA-GATCTGAG--TAT----A-TGC--CCTG-T-GT--G-------T--C--TG---TC--A--TA--GAG-A
i Bos_mutus.JH883513.1                                  C 0 I 2
s Bos_taurus.CM000177.6                                 136293170 48 - 158972876 A-A-ACTAG-GC-T------GA-GATCTGAG--TAT----A-TGC--CCTG-T-GT--G-------T--C--TG---CC--A--TA--GAG-A
i Bos_taurus.CM000177.6                                 C 0 I 2
s Bubalus_bubalis.KI419065.1                              1228926 48 -   1914593 A-A-ACTAG-GA-T------GA-GATCTGAG--TGT----A-TGC--CCTT-T-GT--G-------T--C--TG---TC--A--TA--GAG-A
i Bubalus_bubalis.KI419065.1                            C 0 I 2
s Cacajao_ayresi.k141_724503                               111284 46 -    171031 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----G-TGCCC--TA-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 10310 46 +    125063 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----G-TGCCC--TA-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                12358 46 -    216513 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----G-TGCCC--TA-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        4898 46 -    134917 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----G-TGCCC--TA-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3217535 24 -   8989139 --------------------------------------------C--CCTA-T-GT--G-------T--G--tg---tcata--ca--g-aaa
i Camelus_bactrianus.KN276303.1                         I 8 I 1
s Camelus_dromedarius.KN271192.1                           395239 24 -  15254737 --------------------------------------------C--CCTA-T-GT--G-------T--G--tg---tcata--ca--g-aaa
i Camelus_dromedarius.KN271192.1                        I 8 I 1
s Camelus_ferus.KB016973.1                                2970973 24 +   6889770 --------------------------------------------C--CCTA-T-GT--G-------T--G--tg---tcata--ca--g-aaa
i Camelus_ferus.KB016973.1                              I 8 I 1
s CanFam4.chr31                                          11516029 46 +  39901454 A-A-ACTAG-GC-T------AA-GATCTGAG--TGT----A-TGC--CCT----AT--G-------T--G--TG---TC--A--TA--GAG-A
i CanFam4.chr31                                         C 0 I 2
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   11047 46 +     87036 A-A-ACTAG-GC-T------AA-GATCTGAG--TGT----A-TGC--CCT----AT--G-------T--G--TG---TC--A--TA--GAG-A
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 I 2
s Canis_lupus_dingo.QKWQ01001993.1                       11262690 46 -  35597290 A-A-ACTAG-GC-T------AA-GATCTGAG--TGT----A-TGC--CCT----AT--G-------T--G--TG---tc--a--ta--g-aga
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 I 2
s Canis_lupus_familiaris.chr31                           11085219 46 +  39895921 A-A-ACTAG-GC-T------AA-GATCTGAG--TGT----A-TGC--CCT----AT--G-------T--G--TG---tc--a--ta--g-aga
i Canis_lupus_familiaris.chr31                          C 0 I 2
s Canis_lupus_orion.HG994411.1                           16452243 46 -  44759192 A-A-ACTAG-GC-T------AA-GATCTGAG--TGT----A-TGC--CCT----AT--G-------T--G--TG---tc--a--ta--g-aga
i Canis_lupus_orion.HG994411.1                          C 0 I 2
s Capra_aegagrus.CM003214.1                              21323196 48 + 157394656 A-A-ACTAG-GC-T------GA-GATCTGAG--TGT----A-TGC--CCTG-T-GT--G-------T--C--TG---TC--A--TA--GAG-A
i Capra_aegagrus.CM003214.1                             C 0 I 2
s Capra_hircus.CM004562.1                               135704423 48 - 157403528 A-A-ACTAG-GC-T------GA-GATCTGAG--TGT----A-TGC--CTTG-T-GT--G-------T--C--TG---TC--A--TA--GAG-A
i Capra_hircus.CM004562.1                               C 0 I 2
s Capromys_pilorides.CapPil_scaffold_3308851                  235 22 +       289 a-a-aatag-tg-t------ta-gatttgct--TG----------------------------------------------------------
i Capromys_pilorides.CapPil_scaffold_3308851            N 0 N 0
s Carlito_syrichta.NW_007248099.1                          306516 44 +    345090 ----ATTAG-GC-T------AA-GATCTAAC--TGT----A-TGCCT--TA-T-GT--G-------T--A--tg---cc--a--ta--g---a
i Carlito_syrichta.NW_007248099.1                       I 1 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               57462 48 +     67245 A-A-TCAAG-GC-T------AA-GATATAAG--TGT----A-TGC--CCTA-T-GC--G-------T--G--TG---TC--A--TAGAG---A
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 I 1
s Castor_canadensis.CasCan_scaffold_47037                   27949 45 +     33760 T-A-ATTTG-GG-T------AA-GATCTGAG--TGT----A-TGCCC--TA-T-GT--G-------T--T--TG---TC--A--CA--G----
i Castor_canadensis.CasCan_scaffold_47037               C 0 I 1
s Catagonus_wagneri.CatWag_scaffold_1305                   156756 48 -    276539 A-A-GCAAA-CC-T------AA-GATCTGAG--TGT----A-TTC--CCT----AT--G-------TATG--TG---TC--A--TA--AAG-A
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 I 1
s Cavia_aperea.AVPZ01000278.1                            15784113 46 -  24422027 A-A-AATAG-TG-T------AA-GATTTGAG--TGC----C-TTCAG--TA-T-AT--A-------T--A--Tg---cc--a--ca--c---a
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15796045 46 -  24440124 A-A-AATAG-TG-T------AA-GATTTGAG--TGT----C-TGCAG--TA-T-AT--A-------T--A--Tg---cc--a--ca--c---a
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       174236 46 +    436027 A-A-AATAG-TG-T------AA-GATTTGAG--TGT----C-TGCAG--TA-T-AT--A-------T--A--TG---CC--A--CA--C---A
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18888136 46 -  29618158 C-A-AGTGG-GC-T------GA-GATCTGAC--TGT----A-TGCCC--TA-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 5680 46 -     26817 A-A-AGTGG-GC-T------GA-GATCTGAC--TGT----A-TGCCC--TA-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                 9923 46 +     25043 A-A-AGTGG-GC-T------GA-GATCTGAC--TGT----A-TGCCC--TA-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         5553 44 +     21754 ----ATTAG-GC-T------AA-GATCTGAC--TGT----A-TGCCT--TA-T-GT--G-------T--A--TG---CC--A--TA--G---A
i Cephalopachus_bancanus.k141_702587                    I 1 C 0
s Ceratotherium_simum.JH767818.1                          4361275 10 +   7569818 ---------------------------------------------------------------------G--ta---tc--a--ta--g---a
i Ceratotherium_simum.JH767818.1                        I 19 I 1
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         1030 10 -      9338 ---------------------------------------------------------------------G--TA---TC--A--TA--G---A
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    I 19 I 1
s Cercocebus_atys.KQ010443.1                              6552059 46 +   6739814 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCTC--TG-A-GT--G-------A--G--tg---tc--a--ta--a---a
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      53536 46 -     54931 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCTC--TG-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         18520 46 -     19697 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCTC--TG-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         56051 46 -    107033 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCTC--TG-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        2496 46 -      3853 A-A-AGCAG-GT-T------GA-GATCTGAC--TGT----A-TGCTC--TG-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          26429 46 +     30494 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCTC--TG-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           2453 46 -      4022 A-A-AGTAG-AC-T------GA-GATCTGAC--TGT----A-TGCTC--TG-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          2346 46 -      3505 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCTC--TG-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           21136 46 +     35983 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCTC--TG-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11987672 46 +  12117833 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCTC--TG-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46474425 46 +  46592721 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCTC--TG-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      32252 46 +     33420 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCTC--TG-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        2288 46 -      3443 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCTC--TG-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      3279 46 -      4669 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCTG--TG-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        3074 46 -      4411 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCTC--TG-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         2604 46 -      4205 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCTC--TG-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_1070855           813 49 -      1715 A-A-ACTAG-GC-C------AA-GATATGAG--TGT----A-TGCCT--TA-T-GT--G-------T--A--TGNNNTC--A--GA--G---A
i Chaetophractus_vellerosus.ChaVel_scaffold_1070855     C 0 C 0
s Cheirogaleus_major.k141_1157592                           56447 46 -     68416 A-A-ACTAA-AC-T------AA-GATCTGAT--TGT----A-TGTCT--TA-T-GT--G-------T--G--TG---TC--A--TA--G---A
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            5514 20 +     13308 --------------------------------------------TCT--TA-T-GT--G-------T--G--TG---TC--A--TA--G---A
i Cheirogaleus_medius.k141_133808                       I 21 C 0
s Cheracebus_lucifer.k141_619653                             2958 29 -     18223 A-A-AGTAG-GC-T------GA-AATCTGAC--TGT----A-CGCCC----------------------------------------------
i Cheracebus_lucifer.k141_619653                        C 0 I 13
s Cheracebus_lugens.k141_203936                             19981 29 +     25473 A-A-AGTAG-GC-T------GA-AATCTGAC--TGT----A-CGCCC----------------------------------------------
i Cheracebus_lugens.k141_203936                         C 0 I 13
s Cheracebus_regulus.k141_2128895                           39020 29 +     57117 A-A-AGTAG-GC-T------GA-AATCTGAC--TGT----A-CGCCC----------------------------------------------
i Cheracebus_regulus.k141_2128895                       C 0 I 13
s Cheracebus_torquatus.k141_315545                          43695 29 +     54541 A-A-AGTAG-GC-T------GA-AATCTGAC--TGT----A-CGCCC----------------------------------------------
i Cheracebus_torquatus.k141_315545                      C 0 I 13
s Chinchilla_lanigera.JH721867.1                         15959282 46 +  43084221 a-a-aataa-ta-t------aa-gatttGAG--TGT----A-TGCAC--TA-T-GT--A-------T--A--tg---cc--a--ca--c---a
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         68505 46 +    196370 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----G-TGCTC--TA-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          12686 46 +     40510 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----G-TGCTC--TA-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15135886 46 -  15256731 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCTC--TG-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      30932 46 -     53260 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCTC--TG-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101141381 46 + 101219884 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCTC--TG-A-GT--G-------A--G--tg---tc--a--ta--a---a
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                14416 45 -     21363 A-A-ACTAG-GC-T------AA-GATATGAG--TAT----A-TGCC---TA-T-GT--G-------T--G--TG---TC--A--TA--G---G
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           759726 45 +    964067 A-A-ACTAG-GC-T------AA-GATCTGAG--TAT----A-TGCC---TA-T-GT--G-------T--G--Tg---tc--a--ta--g---a
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_141308              6523 46 -     12508 A-A-ACTGG-GA-T------CA-AATATCAG--AGT----A-TGCCT--TA-T-GC--A-------T--G--TA---CC--A--TA--G---A
i Chrysochloris_asiatica.ChrAsi_scaffold_141308         C 0 C 0
s Colobus_angolensis.KN985967.1                          10879960 46 +  10971483 A-A-AGTAG-GC-T------CA-GATCTGAC--TGT----A-TGCCC--TA-A-GT--G-------A--G--tg---tc--a--ta--a---a
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147661118 46 + 156195979 A-A-AGTAG-GC-T------CA-GATCTGAC--TGT----A-TGCCC--TA-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            13105 46 +     23629 A-A-AGTAG-GC-T------CA-GATCTGAC--TGT----A-TGCCC--TA-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60610717 46 +  78930452 A-A-ACCAA-GC-A------AC-GATTTGAC--TGT----A-TAC--CCAA-C-AT--G-------T--G--tg---tc--a--ca--g---a
i Condylura_cristata.JH655880.1                         C 0 I 4
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         37173 49 -     40477 A-A-ATTAT-ACGT------AA-GATCTGAA--TGT----G-TGC--CTTA-C-AT--G-------T--G--TG---TC--A--TAGAG---A
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 I 1
s Cricetomys_gambianus.CriGam_scaffold_949                 274998 44 -    399297 T-A-AATAT-GC-T------AA-AAC--CAG--TGC----T-TGCCT--TG-T-GT--G-------C--A--TG---TC--A--TA--G---G
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 I 1
s Cricetulus_griseus.LT883672.1                          53026533 44 +  72327488 A-A-AACGT-GC-T------AA-GAT--CGG--GGC----T-TGCCT--TG-T-GT--G-------T--A--TG---TC--A--TA--G---G
i Cricetulus_griseus.LT883672.1                         C 0 I 2
s Crocidura_indochinensis.CroInd_scaffold_38409             17662 42 -     19186 C-A-ACTTT-GC-T------AA-AA-CTTAG--CGT----T-TGC--CC-----AC--T-------T--A--AT---CT--A--GT--A---A
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 I 1
s Cryptoprocta_ferox.CryFer_flattened_line_19014            49335 49 -     70449 A-A-ACTAG-CC-T------AA-GATCTGAG--TGCAT--A-TGC--CCT----AA--G-------T--A--TG---TC--A--TA--GAGGA
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 I 1
s Ctenodactylus_gundi.CteGun_scaffold_447                  205702 47 -    956709 A-A-TCTAGCAT-T------CA-TATTTGAA--TAA----A-TACCC--TG-A-GT--A-------T--A--TG---TC--A--CA--G---A
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 28084 22 -     67205 ------------------------------------------TGCAC--TA-T-GT--A-------T--A--TG---TC--A--CA--C---A
i Ctenomys_sociabilis.CteSoc_scaffold_19489             I 23 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                14890 46 +     26546 A-A-AATAG-TG-T------AA-GATTTGAG--TGC----A-TGCAC--TA-T-GT--G-------T--A--TG---CC--A--CA--C---A
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             56370 46 -    236241 A-A-AATAA-TG-T------AA-GATTTGAG--AGC----A-TGCAC--TA-T-GT--A-------T--A--TG---CC--A--CA--C---A
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          179622 50 -   6883506 A-A-ACCAG-GC-T------AA-GATATGAA--TAT----A-TGCCC--TA-T-GT--A-------T--G--TGNNNtc--a--ga--g--ga
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16842315 46 +  31942871 A-A-ACTAG-AC-T------AA-GATCTGAC--TGT----A-TGTCC--TA-T-GT--G-------T--G--TG---TC--A--TA--G---A
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80034794 46 -  96802777 A-A-AGTAG-GC-T------AA-GATCTGAG--TGT----A-TGC--CCTG----T--G-------T--G--tg---tc--a--ta--g-aga
i Delphinapterus_leucas.KZ290064.1                      C 0 I 3
s Desmodus_rotundus.KZ672188.1                           18696772 48 -  18957592 A-A-TCAAG-CC-T------AA-GAGATAAG--TGC----A-TGC--CCTA-T-GT--G-------T--G--Tg---tc--a--tagag---a
i Desmodus_rotundus.KZ672188.1                          C 0 I 1
s Dicerorhinus_sumatrensis.PEKH010003161.1                 319934 10 +    993696 ---------------------------------------------------------------------G--tg---tc--a--ta--g---a
i Dicerorhinus_sumatrensis.PEKH010003161.1              I 19 I 1
s Diceros_bicornis.DicBicMic_scaffold_9545                    576 10 +    151128 ---------------------------------------------------------------------G--TA---TC--A--TA--G---A
i Diceros_bicornis.DicBicMic_scaffold_9545              I 19 I 1
s Dinomys_branickii.DinBra_scaffold_1996                   155167 46 +    228994 A-A-GACAG-TA-T------AA-GATTTGAC--TGC----A-TGCAC--TA-T-GC--A-------T--A--TG---CC--A--CA--C---A
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3652917 45 +   4240102 T-A-ACTGA-GC-T------AA-AATCTGAG--TGT----A-TGTCC--TG-T-GT--G-------T--A--TG---Tc--a--tg--g----
i Dipodomys_ordii.KN672545.1                            C 0 I 1
s Dipodomys_stephensi.DipSte_scaffold_44365                 24476 45 +     28912 T-A-ACTGA-GC-T------AA-AATCTGAA--TGT----A-TGTCC--TG-T-GT--G-------T--A--TG---TC--A--TG--G----
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 I 1
s Dolichotis_patagonum.DolPat_scaffold_14102                33627 52 -     73477 A-A-AATAG-TG-TAAGAGTAA-GATTTGAG--TGC----A-TGCAC--TA-C-AT--A-------T--A--TG---CC--A--CA--G---A
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.AAIY02274224.1                            309 46 +      1655 A-A-ACTGC-AA-T------AA-AATCCAAG--AGT----G-AGCTT--TA-A-GT--G-------T--G--AG---CC--A--TC--G---A
i Echinops_telfairi.AAIY02274224.1                      C 0 C 0
s Eidolon_helvum.KE772537.1                                 10142 48 +     24177 a-a-actAG-GC-T------AT-GATCTGAG--TGT----A-TGC--CCTA-T-GT--G-------T--G--tg---tc--a--tagag---a
i Eidolon_helvum.KE772537.1                             C 0 I 1
s Elaphurus_davidianus.JRFZ01086400.1                     1489454 48 +   1727528 A-A-ACTAG-GC-T------AA-GATCTGAG--TGT----A-TGC--CCTG-T-GG--G-------T--C--TG---TC--A--TA--GAG-A
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 I 2
s Elephantulus_edwardii.JH947210.1                        7804214 47 +  15467074 A-A-AGTGG-AC-T------AAAAATCTGAG--AGT----A-TGCCT--TT-T-CT--T-------T--A--TT---CT--a--ta--g---a
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        237190 44 -    369425 a-a-aacat-gc-t------aA-GCT--CAG--GGC----T-TGCCT--TG-T-GT--G-------T--A--TG---TC--A--TA--G---G
i Ellobius_lutescens.LOEQ01003611.1                     C 0 I 2
s Ellobius_talpinus.LOJH01090055.1                           4203 44 -      7838 a-a-aacat-gc-t------aA-GCT--CAG--GGC----T-TGCCT--TG-T-GT--G-------T--A--TG---TC--A--TA--G---G
i Ellobius_talpinus.LOJH01090055.1                      C 0 I 2
s Enhydra_lutris.KZ291749.1                              85869101 46 +  99434291 A-A-ACTAG-GC-T------AA-GATCTGAG--TGT----A-TAC--CCT----AT--G-------G--G--tg---tc--a--tg--g-aga
i Enhydra_lutris.KZ291749.1                             C 0 I 1
s Eptesicus_fuscus.JH977687.1                             4701731 48 +   6522550 A-A-ACCAG-GC-T------AA-GATCTGAG--TGT----A-TGC--CCTA-T-GT--G-------T--g--tg---tc--a--tagaa---a
i Eptesicus_fuscus.JH977687.1                           C 0 I 1
s Equus_asinus.JREZ01000062.1                             5850638 44 -   7175178 A-A-ACTAG-GC-T------AA-GATCTGAG--TGT----A-TGC--TCT----AT--G-------T--G--tg---tc--a--ca--g---a
i Equus_asinus.JREZ01000062.1                           C 0 I 1
s Equus_caballus.CM000402.2                              13349140 44 +  41866177 A-A-ACTAG-GC-T------AA-GATCTGAG--TGT----A-TGC--TCT----AT--G-------T--G--tg---tc--a--ca--g---a
i Equus_caballus.CM000402.2                             C 0 I 1
s Equus_przewalskii.ATBW01073585.1                          10630 44 +     92910 A-A-ACTAG-GC-T------AA-GATCTGAG--TGT----A-TGC--TCT----AT--G-------T--G--tg---tc--a--ca--g---a
i Equus_przewalskii.ATBW01073585.1                      C 0 I 1
s Erinaceus_europaeus.JH835290.1                         11530438 44 +  16010500 A-A-ACATC-TT-A------GA-TATCTGTA--TGT----CTTGT-----G-T-GC--A-------T--G--ta---tc--a--ca--g---a
i Erinaceus_europaeus.JH835290.1                        C 0 I 1
s Erythrocebus_patas.Contig8                             48768064 46 -  48907691 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCCC--TG-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          312996 46 +    330699 A-A-AGTAG-GC-T------AA-GATCTGAG--TGT----A-TGC--C--G-T-GT--G-------T--G--TG---TC--A--CA--GAG-A
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 I 3
s Eubalaena_japonica.EubJap_flattened_line_7756             59426 46 +     89355 A-A-AGTAG-GC-T------AA-GATCTGAG--TGT----A-TGC--C--G-T-GT--G-------T--G--TG---TC--A--TA--GAG-A
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 I 3
s Eulemur_albifrons.k141_715837                              2496 46 +     13586 A-A-ACTAG-AC-T------AA-GATCTGAT--TGT----A-TGTCC--TA-C-GT--G-------T--G--TG---TC--A--TA--A---A
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               2431 46 -      6809 A-A-ACTAG-AC-T------AA-GATCTGAT--TGT----A-CGTCC--TA-C-GT--G-------C--G--TG---TC--A--TA--A---A
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             8904 46 +     36558 A-A-ACTAG-AC-T------AA-GATCTAAT--TGT----A-CGTCC--TA-T-GT--G-------T--G--TG---TC--A--TA--A---A
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             5220 46 +     60246 A-A-ACTAA-AC-T------AA-GATCTGAT--TGT----A-CGTCC--TA-T-GT--G-------T--G--TG---TC--A--TA--A---A
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 8710 39 +    109717 ----------AC-T------AA-GATCTGAT--TGT----A-CGTCC--TA-T-GT--G-------T--G--TG---TC--A--TA--A---A
i Eulemur_fulvus.k141_653297                            I 2 C 0
s Eulemur_macaco.k141_1341545                               13082 46 +     16540 A-A-ACTAA-AC-T------AA-GATCTGAT--TGT----A-CGTCC--TA-T-GT--G-------T--G--TG---TC--A--TA--A---A
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                13358 46 +     27497 A-A-ACTAG-AC-T------AA-GATCTAAT--TGT----A-CGTCC--TA-T-GT--G-------T--G--TG---TC--A--TA--A---A
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           15820 46 +     26808 A-A-ACTAG-AC-T------AA-GATCTGAT--TGT----A-CGTCC--TA-T-GT--G-------T--G--TG---TC--A--TA--A---A
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                30548 46 +     46535 A-A-ACTAA-AC-T------AA-GATCTGAT--TGT----A-CGTCC--TA-T-GT--G-------T--G--TG---TC--A--TA--A---A
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              13271 46 -     29447 A-A-ACTAA-AC-T------AA-GATCTGAT--TGT----A-CGTCC--TA-T-GT--G-------T--G--TG---TC--A--TA--A---A
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129890301 48 - 159252932 A-A-ACCAG-CC-T------AA-GATCTGAG--TGTAT--A-TGC--CCT----AT--G-------T--G--tg---tc--a--ta--g-aga
i Felis_catus.CM001386.2                                C 0 I 1
s Felis_catus_fca126.CM031420.1                         129277376 48 - 158578461 A-A-ACCAG-CC-T------AA-GATCTGAG--TGTAT--A-TGC--CCT----AT--G-------T--G--tg---tc--a--ta--g-aga
i Felis_catus_fca126.CM031420.1                         C 0 I 1
s Felis_nigripes.FelNig_flattened_line_8080                 18510 49 +     52776 A-A-ACCAG-CC-T------AA-GATCTGAG--TGTAT--A-TGC--CCT----AT--G-------T--G--TG---TC--A--TA--GAGAA
i Felis_nigripes.FelNig_flattened_line_8080             C 0 I 1
s Fukomys_damarensis.KN123630.1                          13890248 25 -  19261668 a-a-GATAA-TA-T------AA-GATGTGAG--TGT----a-t--------------------------------------------------
i Fukomys_damarensis.KN123630.1                         C 0 I 8
s Galago_moholi.ctg555                                     208411 46 -    847004 T-A-AGTAG-AC-T------AA-TATCTAAC--CAT----A-TGTCC--TA-T-GT--G-------T--G--TG---TC--A--CA--G---A
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           10792 46 -     43889 T-A-AGTAG-AC-T------AA-TATCTAAC--CAT----A-TGTCC--TA-T-GT--G-------T--G--TG---TC--A--CA--G---A
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           7861 41 +     27357 -------AG-AC-T------AC-TATCTAAC--CAT----A-CGTCC--TA-T-GT--G-------T--G--TG---TC--A--CA--G---A
i Galagoides_demidoff.k141_1769638                      I 1 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               153770 46 +    324696 A-A-ACTAG-GG-T------AA-GATTTGAT--TGT----A-TGCCA--TA-T-AT--G-------T--G--TG---TC--A--TA--G---A
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    178971 48 -    189561 A-A-ACTAG-GC-T------AA-GATCTGAG--TGT----A-TGC--CCTG-T-GT--G-------T--C--TG---TC--A--TA--GAG-A
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 I 2
s Glis_glis.GliGli_scaffold_79770                           10173 47 -     18683 AAA-ACTGA-AG-T------AA-GATCTGAG--TGT----A-TGCCC--TA-C-AC--G-------T--A--TG---TC--A--CA--G---A
i Glis_glis.GliGli_scaffold_79770                       C 0 I 7
s Gorilla_beringei.k141_111300                               2653 45 -     14630 A-A-AGTAG-GC-T------GA-GAT-TGAC--TGT----A-TGCCC--TA-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119649752 45 - 195582420 A-A-AGTAG-GC-T------GA-GAT-TGAC--TGT----A-TGCCC--TA-A-GT--G-------A--G--tg---tc--a--ta--a---a
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   74718 34 +    118900 -----------------------GATCTGAG--TGT----A-TGCCT--TA-T-AT--G-------T--A--TG---TC--A--CA--G---A
i Graphiurus_murinus.GraMur_scaffold_4493               I 9 I 4
s Hapalemur_alaotrensis.k141_1198205                         3053 46 +      3980 A-A-GCTAG-AC-T------AA-GATCTGAT--TGT----A-TGTCC--TA-T-GT--G-------T--G--TG---TC--A--TA--G---A
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             25528 46 +     26611 A-A-GCTAG-AC-T------AA-GATCTGAT--TGT----A-TGTCC--TA-T-GT--G-------T--G--TG---TC--A--TA--G---A
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             2990 46 +     56096 A-A-GCTAG-AC-T------AA-GATCTGAT--TGT----A-TGTCC--TA-T-GT--G-------T--G--TG---TC--A--TA--G---A
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        26265 46 -     42470 A-A-GCTAG-AC-T------AA-GATCTGAT--TGC----A-TGTCC--TA-T-GT--G-------T--G--TG---TC--A--TA--G---A
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        42859 46 -     54384 A-A-GCTAG-AC-T------AA-GATCTGAT--TGT----A-TGTCC--TA-T-GT--G-------T--G--TG---TC--A--TA--G---A
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              14546 29 +     53719 A-A-ACTAG-CC-T------AA-GATCTGAG--TGCAT--A-TGC------------------------------------------------
i Helogale_parvula.HelPar_flattened_line_22962          C 0 I 19
s Hemitragus_hylocrius.HemHyl_scaffold_16669                25467 48 -     91191 A-A-ACTAG-GC-T------GA-GATCTGAG--TGT----G-TGC--CCTG-T-GT--G-------T--C--TG---TC--A--TA--GAG-A
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 I 2
s Heterocephalus_glaber.JH602058.1                        2548632 25 +  31725842 A-A-TATAG-TA-T------AA-GATTTGAG--TGT----A-T--------------------------------------------------
i Heterocephalus_glaber.JH602058.1                      C 0 I 8
s Heterohyrax_brucei.HetBruBak_scaffold_25354               54019 46 +     73687 ----ACTGA-GC-T------AA-AATTGGAG--GGT----A-TGCTTTATG-T-GT--G-------C--A--TG---CC--A--CA--G---A
i Heterohyrax_brucei.HetBruBak_scaffold_25354           I 1 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              145032 48 +    277961 A-A-ACTAG-GC-T------AA-AATCTGAG--TGT----A-TGC--CCTG----T--G-------T--GTATG---TC--A--TA--GAG-A
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 I 3
s Hipposideros_armiger.JXIK01001085.1                      276371 35 -    477199 A-A-ACTAG-GC-T------AA-CAGTTGAG--TGT----G-TGC--CCTA-C-GT--G----------------------------------
i Hipposideros_armiger.JXIK01001085.1                   C 0 I 14
s Hipposideros_galeritus.HipGal_scaffold_104691              5530 35 -      9143 A-A-ACTAG-GC-T------AA-GAGTTGAG--TGT----G-TGC--CCTT-T-GT--G----------------------------------
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 I 14
s Hoolock_leuconedys.ctg2405                                   12693 47 -     15084 A-A-AGTAG-GC-T--G---GA-AATCTGAC--TGT----A-TGCCC--TA-A-GT--G-------A--G--TG---TC--C--TA--A---A
i Hoolock_leuconedys.ctg2405                               I 1270 I 943
s Hyaena_hyaena.HyaHya_flattened_line_20729                 13621 26 -     67322 -----------------------------------TAT--A-TGC--CCT----AT--G-------T--G--TG---TC--A--TA--GAG-A
i Hyaena_hyaena.HyaHya_flattened_line_20729             I 10 I 1
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16532 46 -    119109 A-A-AATAG-GG-T------AA-GATTTGAG--TGC----A-TGCAC--TA-T-AT--A-------T--A--TG---CC--A--CA--C---A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              2470 46 +      5897 A-A-AGTAG-GC-T------GA-AATCTGAC--CGT----A-TGCCC--TA-A-GT--G-------A--G--TG---CC--C--TA--A---G
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_282275                               1682 47 +      1846 A-A-AGTAG-GC-T------GA-AATCTGACT-TGT----A-TGCCC--TA-A-GT--G-------A--G--TG---TC--C--TA--A---A
i Hylobates_agilis.k141_282275                          C 0 C 0
s Hylobates_klossii.k141_466549                              8920 46 +     11537 A-A-AGTAG-GC-T------GA-AATCTGAC--TGT----A-TGCCC--TA-A-GT--G-------A--G--TG---TC--C--TA--A---A
i Hylobates_klossii.k141_466549                         I 276 I 3
s Hylobates_pileatus_b.ContigUN                                 14622015 46 -  25970782 A-A-AGTAG-GC-T------GA-AATCTGAC--CGT----A-TGCCC--TA-A-GT--G-------A--G--TG---TC--C--TA--A---A
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1133650                            1904 46 -      2775 A-A-AGTAG-GC-T------GA-AATCTGAC--CGT----A-TGCCC--TA-A-GT--G-------A--G--TG---CC--C--TA--A---G
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             30507 46 -     60944 A-A-AGTAG-GC-T------GA-AATCTGAC--CGT----A-TGCCC--TA-A-GT--G-------A--G--TG---TC--C--TA--A---A
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     3662 53 +     22540 A-A-AATAG-CA-T------AA-GACTTGAG--TGT----A-TGCAC--TA-T-GT--ATTTTGTAT--T--TG---CC--A--CA--G---A
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7123538 46 +  13083262 A-A-ACTGG-GG-T------AA-GATCTGAG--TGG----A-TGCTT--TG-T-GT--G-------T--G--TA---TC--A--TA--G---A
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_1884019                                    744 32 -      2196 -------------------------TCTGAT--TGT----A-TGTCC--TA-T-GT--G-------T--G--TG---TC--A--TA--G---A
i Indri_indri.k141_1884019                              I 8 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               6783 46 +     17520 A-A-AGTAG-GC-T------AA-GATCTGAG--CGT----A-TGC--CCTG----T--G-------T--G--TG---TC--A--TA--GAG-A
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 I 3
s Jaculus_jaculus.JH725517.1                              8563084 43 +  11848649 A-A-GCTGT-GC-T------CA-GACATA----CAC----A-TGTCTCAT----AT--G-------T--A--TG---TC--A--TA--G----
i Jaculus_jaculus.JH725517.1                            I 1 I 1
s Kogia_breviceps.KogBre_flattened_line_35920               21612 46 +     37189 A-A-AGTAG-GC-T------AA-GATCTGAG--TGT----A-TGC--CCTG----T--G-------T--G--TG---TC--A--TA--GAG-A
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 I 3
s Lagothrix_lagothricha.k141_12968                          47515 46 -    147782 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCCC--TA-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   111526 48 -    115756 A-A-ACCAG-GC-T------AA-GATCTGAT--TGT----A-TGC--TCTA-T-GT--G-------A--G--TG---TC--A--TAGAG---A
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 I 1
s Lemur_catta.scaffold_1                                258404548 46 - 285822530 A-A-GCTAG-AC-T------AA-GATCTGAT--TGT----A-TGTCC--TA-T-GT--G-------T--G--TG---TC--A--TA--G---A
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        21420 46 +     39228 A-A-ACTAG-AC-T------AA-GATCTGAT--TGT----A-TGTCC--TA-T-GT--G-------T--G--TG---TC--A--TA--G---A
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            50793 46 +     63517 A-A-ACTAG-AC-T------AA-GATCTGAT--TGT----A-TGTCC--TA-T-GT--G-------T--G--TG---TC--A--TA--G---A
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        76036 46 +    116806 A-A-ACTAG-AC-T------AA-GATCTGAT--TGT----A-TGTCC--TA-T-GT--G-------T--G--TG---TC--A--TA--G---A
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     29058 46 -     33031 A-A-ACTAG-AC-T------AA-GATCTGAT--TGT----A-TGTCC--TA-T-GT--G-------T--G--TG---TC--A--TA--G---A
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3083316 46 -   3498232 A-A-ACTAG-GC-T------AA-GATCTGAG--TGT----A-TGC--CCT----AT--G-------T--G--tg---tc--a--ta--g-aga
i Leptonychotes_weddellii.KB714749.1                    C 0 I 1
s Lepus_americanus.LepAme_scaffold_62849                    10525 46 +     22452 A-A-ATTCA-GC-T------AG-GATCTGAG--TGT----A-TTCCC--TA-C-AT--G-------T--A--TA---TG--A--TA--G---A
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            133941 46 +   3060487 A-A-AGTAG-GC-T------AA-GATCTGAG--TGT----A-TGC--CCTG----T--G-------T--G--Tg---tc--a--ta--g-agg
i Lipotes_vexillifer.KE558548.1                         C 0 I 3
s Lophocebus_aterrimus.ctg55                             19245147 46 +  19376315 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCTC--TG-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            8159 46 +     84689 T-A-AGTAG-AC-T------AA-CATCTAAC--CAT----A-TGTCCCATG----T--G-------T--G--TC---TC--A--CA--G---A
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3775910 46 +   6799190 T-A-AGTAG-AC-T------AA-CATCTAAC--CAT----A-TGTCCCATG----T--G-------T--G--TC---TC--A--CA--G---A
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20588797 46 -  62548349 A-A-ACTGG-GC-T------AA-AATCTGAG--GGT----A-TGCCT--TG-T-GT--G-------T--G--Tg---ac--a--ta--g---g
i Loxodonta_africana.GL010040.1                         C 0 I 4
s Lycaon_pictus.CM007556.1                               11084675 46 +  39895028 A-A-ACTAG-GC-T------AA-GATCTGAG--TGT----A-TGC--CCT----AT--G-------T--G--Tg---tc--a--ta--g-aga
i Lycaon_pictus.CM007556.1                              C 0 I 2
s Macaca_arctoides.k141_2201161                             16834 45 +     74745 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCTC--TG-A-GT--G-------A--G--TG---TC--A--TA--A----
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12703340 45 +  12821369 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCTC--TG-A-GT--G-------A--G--TG---TC--A--TA--A----
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               5436 45 +      6569 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCTC--TG-A-GT--G-------A--G--TG---TC--A--TA--A----
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           43738 45 +     63263 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCTC--TG-A-GT--G-------A--A--TG---TC--A--TA--A----
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_1068107                               12314 45 +     12679 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCTC--TG-A-GT--G-------A--G--TG---TC--A--TA--A----
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                1887 45 +      3017 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCTC--TG-A-GT--G-------A--G--TG---TC--A--TA--A----
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  43499 45 -     79256 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCTC--TG-A-GT--G-------A--G--TG---TC--A--TA--A----
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196032417 45 + 196197964 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCTC--TG-A-GT--G-------A--G--TG---TC--A--TA--A----
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11442523 45 +  11645122 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCTC--TG-A-GT--G-------A--G--TG---TC--A--TA--A----
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   2446 45 -     46448 A-A-AGTAG-GC-T------GA-GATCCGAC--TGT----A-TGCTC--TG-A-GT--G-------A--G--TG---TC--A--TA--A----
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                2277 45 -      3617 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCTC--TG-A-GT--G-------A--G--TG---TC--A--TA--A----
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 12609 45 -     55006 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCTC--TG-A-GT--G-------A--G--TG---TC--A--TA--A----
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43837646 45 +  43892939 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCTC--TG-A-GT--G-------A--G--TG---TC--A--TA--A----
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                4868 45 -      5978 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCTC--TG-A-GT--G-------A--G--TG---TC--A--TA--A----
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               2451 45 -     27140 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCTC--TG-A-GT--G-------A--G--TG---TC--A--TA--A----
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                699560 48 +    802869 A-A-ATTAG-GC-T------AA-GATCTGAG--TGT----A-TGC--CCTA-T-GT--G-------T--A--TG---TC--A--TAAAG---A
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 I 1
s Mandrillus_leucophaeus.scaffold125                     43434307 46 -  43563597 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCTC--TG-A-GT--G-------A--C--TG---TC--A--TA--A---A
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4447133 46 -   4543643 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCTC--TG-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            144064 19 +    252755 ----------GC-T------AA-TATCTAAA--CGT----A-TG-------------------------------------------------
i Manis_javanica.JSZB01003966.1                         I 2 I 15
s Manis_pentadactyla.KN017078.1                             34139 19 +     58827 ----------GC-T------AA-TATCTAAA--CGT----A-TG-------------------------------------------------
i Manis_pentadactyla.KN017078.1                         I 2 I 15
s Marmota_marmota.CZRN01000005.1                         36871378 46 +  64221397 A-A-ACTGG-GG-T------AA-GATCTGAG--TGG----A-TGCTT--TG-T-GT--G-------T--G--TA---TC--A--TA--G---A
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       62212 48 -    234502 A-A-ACTAG-GC-T------AA-GATCTGTG--TGT----G-TGC--CCTA-C-CT--G-------T--G--TG---TC--A--TAGAG---G
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 I 1
s Mellivora_capensis.MelCap_flattened_line_1828            226592 46 -    226874 A-A-ACTAG-GC-T------AA-GATCTGAG--TGT----A-TAC--CCT----AT--G-------G--G--TG---TC--A--TG--GAG-A
i Mellivora_capensis.MelCap_flattened_line_1828         C 0 I 1
s Meriones_unguiculatus.MerUng_scaffold_52233                9487 44 +     15977 A-A-AATGT-GC-T------AA-GAC--CAG--TGC----T-TGCCT--TT-T-GT--A-------T--A--TG---TC--A--CA--G---G
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1044274 44 -  26018355 A-A-AACGT-GC-T------AA-GAT--CAT--Ggt----a-tggct--tg-t-gt--g-------t--g--tg---tc--a--ta--g---g
i Mesocricetus_auratus.KB708139.1                       C 0 I 2
s Mesoplodon_bidens.MesBid_scaffold_183284                   1651 46 +      2166 A-A-AGTAG-GC-T------AA-GATCTGAG--TGT----A-TGC--CCTG----T--G-------T--G--TG---TC--A--TA--GAG-A
i Mesoplodon_bidens.MesBid_scaffold_183284              C 0 I 3
s Microcebus_murinus.CM007691.1                          16507668 46 +  47401472 A-A-ACTAG-AC-T------AA-GATCTGAT--TGT----A-TGTCC--TA-T-GT--G-------T--G--tg---tc--a--ta--g---g
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  28939 46 -     48017 A-A-ACTGA-AA-T------AA-AATCCAAG--CAT----G-AGCTT--TA-C-AA--G-------T--G--AA---CT--A--TA--T---G
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               20639 48 -     32043 A-A-TCAAG-GC-C------AA-GATATAAG--TAC----A-TGC--CTTA-T-GT--G-------T--G--TG---TC--A--TAGAG---A
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 I 1
s Microtus_ochrogaster.CM001673.1                        22817391 44 -  98408828 A-A-AACGT-GC-T------AA-GCT--CAG--GGC----T-TGCCT--TG-T-GT--G-------T--A--TG---TC--A--TA--G---G
i Microtus_ochrogaster.CM001673.1                       C 0 I 2
s Miniopterus_natalensis.LDJU01000022.1                   8207396 51 +  10048721 A-A-ACCAG-GA-T------AA-GATCTGAG--TGt----a-tgc--cctg-t-gtgtg-------t--g--tg---tc--a--tagag--ga
i Miniopterus_natalensis.LDJU01000022.1                 C 0 I 1
s Miniopterus_schreibersii.MinSch_scaffold_24116            32067 51 +     45743 A-A-ACCAG-GA-T------AA-GATCTGAG--TGT----A-TGC--CCTG-T-GTGTG-------T--G--TG---TC--A--TAGAG-G-A
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 I 1
s Miopithecus_ogouensis.k141_2666161                        32966 46 +     34273 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCTC--TG-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         8619 46 -    104932 A-A-ACTAG-GC-T------AA-GATCTGAG--TGT----A-TGC--CCT----AT--G-------T--G--TG---TC--A--TA--GAG-A
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 I 1
s Mirza_zaza.k141_226143                                     3073 46 +      8497 A-A-ACTAG-AC-T------AA-GATCTGAT--TGT----A-TGTCC--TA-T-GT--G-------T--G--TG---TC--A--TA--G---G
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 144378 46 +    154973 A-A-AGTAG-GC-T------AA-GATCTGAG--TGT----A-TGC--CCTG----T--G-------T--G--TG---TC--A--TA--GAG-A
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 I 3
s Mormoops_blainvillei.MorMeg_scaffold_2952                159150 48 +    265003 A-A-AAGAG-GC-T------AA-GATATAAG--TAT----A-TGC--CCTC-T-GT--G-------T--G--TG---TC--A--TAGAG---A
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 I 1
s Moschus_moschiferus.MosMos_scaffold_146101                 2557 48 -      4346 A-A-ACTAG-GC-T------GA-GATCTGAG--TGT----A-TGC--CCTG-T-GG--G-------T--C--TG---TC--A--TA--GAG-A
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 I 2
s Mungos_mungo.MunMun_flattened_line_8729                  142241 29 -    168139 A-A-ACTAG-CC-T------AA-GATCTGAG--TGCAT--A-TGC------------------------------------------------
i Mungos_mungo.MunMun_flattened_line_8729               C 0 I 19
s Murina_feae.MurFea_scaffold_2254                          17041 48 -    100666 A-A-ACTAG-GC-T------AA-GATCTGAA--TGT----A-TGC--CCTA-T-GT--G-------T--G--TG---TC--A--TAGAG---A
i Murina_feae.MurFea_scaffold_2254                      C 0 I 1
s Mus_caroli.LT608236.1                                  70763904 44 +  92629107 t-t-aatgt-ga-a------aa-gAC--AAA--TGC----T-TGCCT--T--TAGT--G-------T--G--TG---TC--A--TA--G---G
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75486943 40 +  98207768 t-t-aatgt-gc-t------AA-GAC--------GC----T-TGCCT--T--TAGT--G-------T--G--TG---TC--A--TA--G---G
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67553132 23 +  89017189 ----------------------------------------t-tgcct--tt-t-gt--g-------t--g--tg---tc--a--ta--g---g
i Mus_pahari.LT608305.1                                 I 9 C 0
s Mus_spretus.CM004110.1                                 74328118 44 +  97876770 t-t-aatgt-gc-t------AA-AAC--CAA--TGC----T-TGCCT--T--TAGT--G-------T--G--Tg---tc--a--ta--g---g
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              8675 45 +     98495 AAA-ACTGC-AG-T------AT-AATCTAAG--CGT----A-TGTTC--TA-T-AT--G-------T--A--TA---TC--A--CG-------
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4421484 46 -  28371801 A-A-ACTAG-GC-T------AA-GATCTGAG--TGT----A-TAC--CCT----AT--G-------G--G--tg---tc--a--tg--g-aga
i Mustela_putorius.JH417978.1                           C 0 I 1
s Myocastor_coypus.MyoCoy_scaffold_3653                     87605 23 -    117718 A-AAAATAG-TG-T------TA-GATTTGCT--TG----------------------------------------------------------
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 I 35
s Myotis_brandtii.KE161952.1                               965362 48 +   8389877 A-A-ACCAG-GC-T------AA-GATCTGAG--TGT----A-TGC--CCTA-T-AT--G-------T--G--Tg---tc--a--tagag---a
i Myotis_brandtii.KE161952.1                            C 0 I 1
s Myotis_davidii.KB114863.1                               5017053 48 +   6462685 A-A-ACCAG-GC-T------AA-GGTCTGAG--TGT----A-TTC--CCTA-T-AT--G-------T--G--Tg---tc--a--tagag---a
i Myotis_davidii.KB114863.1                             C 0 I 1
s Myotis_lucifugus.GL429887.1                             3462949 48 -   3747815 A-A-ACCAG-GC-T------AA-GATCTGAG--TGT----A-TGC--CCTA-T-AT--G-------T--G--TG---TC--A--TAGAG---A
i Myotis_lucifugus.GL429887.1                           C 0 I 1
s Myotis_myotis.MyoMyo_scaffold_6123                         8144 48 +     66751 A-A-ACCAG-GC-T------AA-GATCTGAG--TGT----A-TGC--CCTA-T-AT--G-------T--G--TG---TC--A--TAGAG---A
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 I 1
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3018 46 -      8794 A-A-ACTAG-GC-T------AA-AATGTTTG--TAT----A-TGCCT--TA-T-GT--G-------C--A--TG---CC--A--TT--G---A
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            107998 29 +    362372 a-a-attgt-gc-t------aa-GATTTCAG--TGT----A-TTCCT----------------------------------------------
i Nannospalax_galili.KL201303.1                         C 0 I 13
s Nasalis_larvatus.k141_153429                               5345 46 +     48152 A-A-AGTAG-GC-T------CA-GATCTGAC--TGT----A-TGCCC--TA-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4482219 46 -  14209539 A-A-ATTAG-GC-T------AA-GATCTGAG--TGT----A-TGC--CCT----AT--G-------T--G--tg---tc--a--ta--g-aga
i Neomonachus_schauinslandi.NINY01007774.1              C 0 I 1
s Neophocaena_asiaeorientalis.KZ688543.1                  3948989 46 -   4490290 A-A-AGTAG-GC-T------AA-GATCTGAG--TGT----A-TGC--CCTG----T--G-------T--G--tg---tc--a--ta--g-aga
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 I 3
s Noctilio_leporinus.NocLep_scaffold_12062                  47266 48 +     94413 A-A-GTGAG-GC-T------CA-GATATAAG--TGT----A-TAC--CCAA-T-GT--G-------T--G--TG---TC--A--TAGAG---A
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 I 1
s Nomascus_annamensis.k141_1439838                            217 46 +      3718 A-A-AGTAT-GC-T------GA-AATCTGAC--TGT----A-TGCCC--TA-A-GT--G-------A--G--TG---TC--C--TA--A---A
i Nomascus_annamensis.k141_1439838                      C 0 I 3
s Nomascus_concolor.k141_49591                                440 46 +      2014 A-A-AGTAG-GC-T------GA-AATCTGAC--TGT----A-TGCCC--TA-A-GT--G-------A--G--TG---TC--C--TA--A---A
i Nomascus_concolor.k141_49591                          C 0 C 0
s Nomascus_gabriellae.k141_906566                            1770 44 -      2544 A-A-AGTAG-GC-T------GA-AATCTGAC--TGT----G-TGCCCC--G----T--G-------A--G--TG---TC--C--TA--A---A
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             22244 46 -  18771707 A-A-AGTAG-GC-T------GA-AATCTGAC--TGT----A-TGCCC--TA-A-GT--G-------A--G--TG---TC--C--TA--A---A
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_844529                                  1519 46 +      2124 A-A-AGTAT-GC-T------GA-AATCTGAC--TGT----A-TGCCC--TA-A-GT--G-------A--G--TG---TC--C--TA--A---A
i Nomascus_siki_a.k141_844529                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                27668 46 +   3668941 A-A-ACTAG-GC-T------AA-GATCTGAG--TGT----A-TGC--CCT----AT--G-------G--G--Tg---tc--a--ta--g-aga
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 I 2
s Nycticebus_bengalensis.LG16                            65564507 44 -  95554990 T-A-AGTAG-AC-T------AA-CATCTAAC--CAT----A-TGTCCC--G-T-GT--G-------T--G--T-----C--A--CA--G---A
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            1352 44 +      6470 T-A-AGTAG-AC-T------AA-CATCTAAC--CAT----A-TGTCCC--G-T-GT--G-------T--G--T-----C--A--CA--G---A
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65666877 44 +  89412551 T-A-AGTAG-AC-T------AA-TATCTAAC--CAT----A-TGTCCC--G-T-GT--G-------T--G--T-----C--A--CA--G---A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4993509 34 -  23139505 A-A-ATTAG-GC-T------AA-TATCTGAG--CAT----A-TTTCT--TA-A-GT-------------------------------------
i Ochotona_princeps.JH802095.1                          C 0 I 11
s Octodon_degus.JH651621.1                                3682211  3 +  10294119 ------------------------------a--tg----------------------------------------------------------
i Octodon_degus.JH651621.1                              I 1579 I 918
s Odobenus_rosmarus.KB229369.1                             676874 47 -   3126709 A-A-ACTAG-GC-T------AA-GATCTGAG--TGT----A-TGC--CCT----AT--G-------T--G--tg---tc--a--ta--gagaa
i Odobenus_rosmarus.KB229369.1                          C 0 I 2
s Odocoileus_virginianus.KZ101650.1                       1077685 48 +   1425656 A-A-ACCAG-GC-T------AA-GATCTGAG--TGT----G-TGC--CCCG-T-GT--G-------T--C--TG---TC--A--CA--GAG-A
i Odocoileus_virginianus.KZ101650.1                     C 0 I 2
s Okapia_johnstoni.LVCL01S0017931.1                         34841 48 +     78940 A-A-ACCAG-GC-T------AA-GATCTGAG--TGT----A-TGC--CCTG-T-GT--G-------T--C--TG---TC--A--TA--GAG-A
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 I 2
s Ondatra_zibethicus.OndZib_scaffold_6821                  122667 44 +    145789 A-A-AACGT-GC-T------AA-GCT--CAG--GGC----T-TGCCT--TG-T-GT--G-------T--A--TG---TC--A--TA--G---G
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 I 2
s Onychomys_torridus.OnyTor_scaffold_12578                  34421 44 +     62360 A-A-AATGT-GC-T------AA-GAT--CAG--GGC----T-TGCCT--TG-T-GT--G-------T--A--TG---TC--A--GA--G---G
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 I 2
s Orcinus_orca.KB316965.1                                 7222675 46 -   7562323 A-A-AGTAG-GC-T------AA-GATCTGAG--TGT----A-TGC--CCTG----T--G-------T--G--tg---tc--a--ta--g-aga
i Orcinus_orca.KB316965.1                               C 0 I 3
s Orycteropus_afer.OryAfe_flattened_line_13509              41057 46 -     66828 A-A-ACTAC-AC-T------AA-AATCTGAG--GGT----A-TGCCT--TA-T-GT--G-------T--A--TG---CC--A--TA--C---A
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141873181 46 + 163896628 A-A-ATTCA-GC-T------AG-AATCAGAG--TGT----A-TTCCC--TA-C-AT--G-------T--A--ta---tg--a--ta--g---a
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      305007 46 -    505867 A-A-ACTAG-GC-T------AA-GATCTGAG--TGT----A-TGC--CCT----AT--G-------T--G--Tg---tc--a--ta--g-aga
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 I 2
s Otolemur_crassicaudatus.k141_321880                       36499 46 +     38679 T-A-AGTAG-AC-T------AA-CATCTAAG--CAT----A-TGTCC--TA-T-GT--G-------T--G--TG---TC--A--CA--G---A
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18005941 46 -  38779656 t-a-agtag-ac-t------aA-CATCTAAC--CAT----A-TGTCC--TA-T-GT--G-------T--G--TG---TC--A--CA--G---A
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134075260 48 - 275406953 A-A-ACTAG-GC-T------GA-GATCTGAG--TGT----G-TGC--CCTG-T-GT--G-------T--C--TG---TC--A--TA--GAG-A
i Ovis_aries.CM001582.2                                 C 0 I 2
s Ovis_canadensis.OviCan_scaffold_6251                      76474 48 +    140051 A-A-ACTAG-GC-T------GA-GATCTGAG--TGT----G-TGC--CCTG-T-GT--G-------T--C--TG---TC--A--TA--GAG-A
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 I 2
s Pan_paniscus.CM003386.1                               127571997 45 - 205426864 A-A-AGTAG-GC-T------GA-GAT-TGAC--TGT----A-TGCCC--TA-A-GT--G-------A--G--tg---tc--a--ta--a---a
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120149150 45 - 196562556 A-A-AGTAG-GC-T------GA-GAT-TGAC--TGT----A-TGCCC--TA-A-GT--G-------A--G--tg---tc--a--ta--a---a
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  31700 48 +    295523 A-A-ACCAG-CC-T------AA-GATCTGAG--TGTAT--A-TGC--CCT----AT--G-------T--G--TG---TC--A--TA--GAG-A
i Panthera_onca.PanOnc_flattened_line_1615              C 0 I 1
s Panthera_pardus.KV860323.1                              3635301 48 +  18214204 A-A-ACCAG-CC-T------AA-GATCTGAG--TGTAT--A-TGC--CCT----AT--G-------T--G--tg---tc--a--ta--g-aga
i Panthera_pardus.KV860323.1                            C 0 I 1
s Panthera_tigris.KE721879.1                              5025082 48 -   6340057 A-A-ACCAG-CC-T------AA-GATCTGAG--TGTAT--A-TGC--CCT----AT--G-------T--G--tg---tc--a--ta--g-aga
i Panthera_tigris.KE721879.1                            C 0 I 1
s Pantholops_hodgsonii.KE114631.1                         1064121 48 -   1292953 A-A-ACTAG-GC-T------GA-GATCTGAG--TGT----A-TGC--CCTG-T-GT--G-------T--C--TG---TC--A--TG--GAG-A
i Pantholops_hodgsonii.KE114631.1                       C 0 I 2
s Papio_anubis.CM001492.2                               188153091 46 - 188283584 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCTC--TG-A-GT--G-------A--G--tg---tc--a--ta--a---a
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            49303 46 +     76494 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCTC--TG-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47510488 46 +  47705337 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCTC--TG-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 64465 46 -    104429 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCTC--TG-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  14256 46 -     29451 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCTC--TG-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                34659 46 +     35859 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCTC--TG-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113002 48 -    135482 A-A-ACTAG-CC-T------AA-TATCTGAG--TGTAT--A-TGC--CCT----AT--G-------T--G--TG---TC--T--TA--GAG-A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 I 1
s Perodicticus_ibeanus.k141_117958                           2552 46 -     23713 T-A-AGTAG-AC-T------AA-CATCTAAC--TAT----A-TGTCC--TA-T-AT--G-------T--G--TG---TC--A--CA--G---A
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            21851 46 -     27972 T-A-AGTAG-AC-T------AA-CATCTAAC--TAT----A-TGTCC--TA-T-AT--G-------T--G--TG---TC--A--CA--G---A
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      40482 34 -     45160 -----------------------TATCTGAG--TGT----A-TGCCC--TG-T-GT--G-------T--A--TG---TC--A--TA--G---A
i Perognathus_longimembris.PerPac_flattened_line_22291  I 10 C 0
s Peromyscus_maniculatus.KI615518.1                       4947597 44 -   8017169 a-a-aatgt-gc-t------aa-gAT--CAG--GGC----T-TGCCT--TG-T-GT--G-------T--A--TG---TC--A--GA--G---G
i Peromyscus_maniculatus.KI615518.1                     C 0 I 2
s Petromus_typicus.PetTyp_scaffold_33007                     9780 50 -     36578 A-A-GATGA-TG-C------AA-GATTTGAATGCAT----C-CTCTC--TA-T-AT--A-------C--A--TG---CC--AACCA--A---G
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            119291 46 -    122454 A-A-AGTAG-GC-T------AA-GATCTCAG--TGT----A-TGC--CCTG----T--G-------T--G--TG---TC--A--TA--GAG-A
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 I 3
s Piliocolobus_badius.k141_1497351                           2349 46 -      3310 A-A-AGTAG-GC-T------CA-GATCTGAC--TGT----A-TGCCC--TA-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       22254 46 -     82327 A-A-AGTAG-GC-T------CA-GATCTGAC--TGT----A-TGCCC--TA-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           19001 46 +     19957 A-A-AGTAG-GC-T------CA-GATCTGAC--TGT----A-TGCCC--TA-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26737015 46 +  26888534 A-A-AGTAG-GC-T------CA-GATCTGAC--TGT----A-GGCCC--TA-A-GT--G-------A--G--tg---tc--a--ta--a---a
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            94812 48 +    112873 A-A-ACCAG-GC-T------AA-GATCTGAG--TGT----A-TGC--CCTA-T-GT--G-------T--G--CG---TC--A--TAGAG---G
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        I 680 I 1
s Pithecia_albicans.k141_991845                             40998 46 -     61926 A-A-AGTAG-GC-T------GA-GATCTGAC--TGC----A-TGCCC--TA-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        22427 46 +     78826 A-A-AGTAG-GC-T------GA-GATCTGAC--TGC----A-TGCCC--TA-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              6378 46 -     15800 A-A-AGTAG-GC-T------GA-TATCTGAC--TGC----A-TGCCC--TA-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                         9576 46 -     16101 A-A-AGTAG-GC-T------GA-TATCTGAC--TGC----A-TGCCC--TA-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          2885 46 +      9673 A-A-AGTAG-GC-T------GA-TATCTGAC--TGC----A-TGCCC--TA-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13471879 46 -  19735023 A-A-AGTAG-GC-T------GA-GATCTGAC--TGC----A-TGCCC--TA-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           10787 46 -     31692 A-A-AGTAG-GC-T------GA-TATCTGAC--TGC----A-TGCCC--TA-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           3359 46 +     21690 A-A-AGTAG-GC-T------AA-GGTCTGAG--TGT----A-TGC--CCTG----T--G-------T--G--TG---TC--A--TA--GAG-A
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 I 3
s Plecturocebus_bernhardi.k141_959214                       20223 29 +     44506 T-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCCC----------------------------------------------
i Plecturocebus_bernhardi.k141_959214                   C 0 I 13
s Plecturocebus_brunneus.k141_498086                        20433 29 +     67491 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCCC----------------------------------------------
i Plecturocebus_brunneus.k141_498086                    C 0 I 13
s Plecturocebus_caligatus.k141_2539816                      10674 29 -     98129 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCCC----------------------------------------------
i Plecturocebus_caligatus.k141_2539816                  C 0 I 13
s Plecturocebus_cinerascens.k141_744510                     20279 29 +    147771 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCCC----------------------------------------------
i Plecturocebus_cinerascens.k141_744510                 C 0 I 13
s Plecturocebus_cupreus.k141_1223294                        20529 29 -     23762 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCCC----------------------------------------------
i Plecturocebus_cupreus.k141_1223294                    C 0 I 13
s Plecturocebus_dubius.k141_3565563                           995 29 -     55515 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCCC----------------------------------------------
i Plecturocebus_dubius.k141_3565563                     C 0 I 13
s Plecturocebus_grovesi.k141_242819                         20348 29 +    152463 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCCC----------------------------------------------
i Plecturocebus_grovesi.k141_242819                     C 0 I 13
s Plecturocebus_hoffmannsi.k141_1595076                      7108 29 +      8943 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCCC----------------------------------------------
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 I 13
s Plecturocebus_miltoni.k141_841561                         10068 29 +    134592 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCCC----------------------------------------------
i Plecturocebus_miltoni.k141_841561                     C 0 I 13
s Plecturocebus_moloch.k141_890597                          20658 29 -     75465 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCCC----------------------------------------------
i Plecturocebus_moloch.k141_890597                      C 0 I 13
s Pongo_abelii.NDHI03003816.1                              184541 46 -    373494 A-A-AGTAG-GC-T------GA-GATCCGAC--TGT----A-TGCCC--TA-A-GT--G-------A--G--tg---tc--a--ta--a---a
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19804448 46 +  19899266 A-A-AGTAG-GC-T------GA-GATCCGAC--TGT----A-TGCCC--TA-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               2587 29 -     15069 A-A-AGTAG-GC-T------CA-GATCTGAC--TGT----A-TGCCC----------------------------------------------
i Presbytis_comata.k141_672698                          C 0 I 13
s Presbytis_mitrata.k141_860013                              2721 29 +     14865 A-A-AGTAG-GC-T------CA-GATCTGAC--TGT----A-TGCCC----------------------------------------------
i Presbytis_mitrata.k141_860013                         C 0 I 13
s Procavia_capensis.ProCapCap_scaffold_15315                73883 46 +     78963 ----ACTGA-GC-T------AA-AATTGGAG--GGT----A-TGCTTTATG-T-GT--G-------C--A--TG---CC--A--CA--G---A
i Procavia_capensis.ProCapCap_scaffold_15315            I 1 C 0
s Prolemur_simus.MPIZ01000048.1                           6845924 46 +  12164890 A-A-GCTAG-AC-T------CA-GATCTGAT--TGT----A-TGTCC--TA-T-GT--G-------T--g--tg---tc--a--ta--g---a
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    664541 46 -   2312742 N-N-NNNNN-NN-N------NN-NNNNNNNN--NNN----N-NNNNN--NN-N-NN--N-------N--N--NN---NN--N--NN--N---N
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         1069 46 +     11805 A-C-ATTAG-AT-T------AA-GATCCGAT--TGT----A-TGTAC--TA-T-GT--G-------T--G--TG---TC--A--TA--G---A
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           40404 46 +     52369 A-C-ATTAG-AT-T------AA-GATCTGAT--TGT----A-TGTCC--TA-T-GT--G-------T--G--TG---TC--A--TA--G---A
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         32792 46 -     44753 A-C-ATTAG-AT-T------AA-GATCTGAT--TGT----A-TGTCC--TA-T-GT--G-------T--G--TG---TC--A--TA--G---A
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            14713 46 +     27322 A-C-ATTAG-AT-T------AA-GATCTGAT--TGT----A-TGTCC--TA-T-GT--G-------T--G--TG---TC--A--TA--G---A
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       14352 46 -     53241 A-C-ATTAG-AT-T------AA-GATCTGCT--TGT----A-TGTCC--TA-T-GT--G-------T--G--TG---TC--A--TA--G---A
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         36624 46 -     48185 A-C-ATTAG-AT-T------AA-GATCTGCT--TGT----A-TGTCC--TA-T-GT--G-------T--G--TG---TC--A--TA--G---A
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           31027 44 +     77221 a-a-aatgt-ac-t------aa-GAC--CAG--TGC----T-TGCCT--TT-T-GT--G-------T--A--tg---tc--a--ca--g---g
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            1818 48 -     27784 A-A-ATGAA-GC-T------AA-GATATAAG--TGT----A-TGC--TCTA-T-GT--G-------T--G--tg---tc--a--tacag---a
i Pteronotus_parnellii.KE867983.1                       C 0 I 1
s Pteronura_brasiliensis.PteBra_flattened_line_1343        243577 46 -    344369 A-A-ACTAG-GC-T------AA-GATCTGAG--TGT----A-TAC--CCT----AT--G-------G--G--TG---TC--A--TG--GAG-A
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 I 1
s Pteropus_alecto.KB031157.1                             13243940 48 -  17261082 A-A-ACTAG-GC-T------AT-GATCTGAG--TGT----A-TGC--CCTA-T-GT--A-------T--G--tg---tc--a--tagag---a
i Pteropus_alecto.KB031157.1                            C 0 I 1
s Pteropus_vampyrus.KN525959.1                             601893 48 -   3946241 A-A-ACTAG-GC-T------AT-GATCTGAG--TGT----A-TGC--CCTA-T-GT--A-------T--G--tg---tc--a--tagag---a
i Pteropus_vampyrus.KN525959.1                          C 0 I 1
s Puma_concolor.QAVW01000427.1                          131531664 48 - 161321710 A-A-ACCAG-CC-T------AA-GATCTGAG--TGTAT--A-TGC--CCT----AT--G-------T--G--Tg---tc--a--ta--g-agg
i Puma_concolor.QAVW01000427.1                          C 0 I 1
s Pygathrix_cinerea.k141_374971                             26712 46 +     56732 A-A-AGTAG-GC-T------CA-GATCTGAC--TGT----A-TGCCC--TA-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6803203 46 +   6970761 A-A-AGTAG-GC-T------CA-GATCTGAT--TGT----A-TGCCC--TA-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             2596 46 +     18040 A-A-AGTAG-GC-T------CA-GATCTGAT--TGT----A-TGCCC--TA-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                13763 48 +     68503 A-A-ACCAG-GC-T------AA-GATCTGAG--TGT----G-TGC--CCTG-T-GT--G-------T--C--TG---TC--A--CA--GAG-A
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 I 2
s Rattus_norvegicus.chr11                                13913001 48 +  90463843 t-t-aatgt-gc-t------aa-GAC--CAA--TCCTTtct-tgcct--tg-t-gt--g-------t--g--tg---tc--a--ta--g---G
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1785758 48 +   2252614 A-A-ATTAG-GC-T------AA-GATCTGAG--Tgt----g-tgc--cctt-t-gt--g-------t--g--tg---tc--a--tagag---g
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 I 1
s Rhinopithecus_bieti.k119_102124                           13149 46 -     14454 A-A-AGTAG-GC-T------CA-GATCTGAC--TGT----C-TGCTC--TA-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206374475 46 - 206558726 A-A-AGTAG-GC-T------CA-GATCTGAC--TGT----C-TGCCC--TA-A-GT--G-------A--G--tg---tc--a--ta--a---a
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44852123 46 -  45163003 A-A-AGTAG-GC-T------CA-GATCTGAC--TGT----C-TGCTC--TA-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                17244 37 +    109198 ---------------------T-GATCTGAG--TGT----A-TGC--CCTA-T-GT--G-------T--G--CG---TT--A--TAGAG---A
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            I 3 I 1
s Saiga_tatarica.SaiTat_scaffold_82192                       5569 48 +     12214 A-A-ACTAG-GC-T------GA-GATCTGAG--TGC----A-TGC--CCTG-T-GT--G-------T--C--TG---TC--A--CA--GAG-A
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 I 2
s Saimiri_boliviensis.NW_024100938.1                     15670111 46 -  43202129 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCCC--TA-A-GT--G-------A--g--tg---tc--a--ta--a---a
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        1978 46 +     34089 A-A-AGTAG-GC-T------GA-GCTCTGAC--TGT----A-TGCCC--TA-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              1919 46 -     60842 A-A-AGTAG-GC-T------GA-GCTCTGAC--TGT----A-TGCCC--TA-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              2014 46 +     67014 A-A-AGTAG-GC-T------GA-GCTCTGAC--TGT----A-TGCCC--TA-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              1992 46 +     60816 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCCC--TA-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 1929 46 -     76454 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCCC--TA-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17338664 46 -  30362882 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCCC--TA-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         18039 46 -     62485 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCCC--TA-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   29326 46 -    114521 A-A-ACCAG-GC-A------GA-GATTTGAC--TGT----A-TGA--CCAA-C-GT--G-------T--G--TG---TC--A--CA--G---A
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 I 4
s Semnopithecus_entellus.k141_1527475                       25137 46 +     26421 A-A-AGTAG-GC-T------CA-GACCTGAC--TGT----A-TGCCC--TA-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       5597 46 +     20762 A-A-AGTAG-GC-T------CA-GATCTGAC--TGT----A-TGCCC--TA-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         39332 46 +     40653 A-A-AGTAG-GC-T------CA-GATCTGAC--TGT----A-TGCCC--TA-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                            9889 46 -     12194 A-A-AGTAG-GC-T------CA-GATCTGAC--TGT----A-TGCCC--TA-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     23311 46 -     27512 A-A-AGTAG-GC-T------CA-GACCTGAC--TGT----A-TGCCC--TA-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         32330 46 -     33692 A-A-AGTAG-GC-T------CA-GATCTGAC--TGT----A-TGCCC--TA-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   97218 44 -    120886 A-A-AATGT-GC-T------AA-GAT--CAG--AGC----T-TGACTTCTG----T--G-------T--A--TG---TC--A--TA--G---G
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 I 2
s Solenodon_paradoxus.SolPar_flattened_line_1012            15968 43 +    739146 A-A-AATAG-GC-T------GA-GATCTGAG--TGT----C-TGC---AT--T--T--G-------T--G--TG---CC--A--CA--G---A
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 I 1
s Sorex_araneus.JH798170.1                               17748175 38 -  27805282 A-A-ACTAT-GT-T------AA-AA-CTTTG--AGT----T-TTC--C------AC--T-------T--T--AG---TT--G--G--------
i Sorex_araneus.JH798170.1                              C 0 I 8
s Spermophilus_dauricus.KZ294190.1                        2237454 46 +   2842873 A-A-ACTGG-GG-T------AA-GATCTGAG--TGG----A-TGCTT--TG-T-GT--G-------T--G--TA---TC--A--TA--G---A
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             232344 46 -    276980 G-A-ACTAG-GC-T------AA-GATCTGAG--CGT----A-TAT--CCT----AT--G-------G--G--TG---TC--A--TA--GAG-A
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 I 1
s Suricata_suricatta.SurSur_flattened_line_20339            24905 29 +     62062 A-A-ACTAG-CC-T------AA-GATCTGAG--TGCAT--A-TGC------------------------------------------------
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 I 19
s Sus_scrofa.CM000824.4                                 189269817 32 + 218635234 A-A-GCAAA-GC-T------AA-GATCTGAG--TGT----A-TTC--CCT----AT-------------------------------------
i Sus_scrofa.CM000824.4                                 C 0 I 13
s Symphalangus_syndactylus.tarseq_24                        12267 46 -  13920577 A-A-AGTAG-GC-T------GA-AATCTGAC--TGT----A-TGCCC--TA-A-GT--G-------A--G--TG---TC--C--TA--A---A
i Symphalangus_syndactylus.tarseq_24                    I 33 I 3
s Tadarida_brasiliensis.TadBra_scaffold_145589               3759 48 -      6213 A-A-ACCAG-GC-T------AA-GATCTGAG--TGT----T-TGT--CCTA-T-GT--G-------T--G--TG---TC--A--TAGAG---A
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 I 1
s Tamandua_tetradactyla.TamTet_scaffold_26877               12691 46 +     45698 A-A-ACTAG-GC-T------AA-AATGTTTG--TAT----A-TGCCC--TA-T-GT--G-------C--A--TG---CC--A--TT--G---A
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      804705 21 +   1148477 ----------------------------------------G-TGC----TA-T-GT--G-------T--G--TG---TC--A--TA--G---A
i Tapirus_indicus.TapInd_scaffold_176                   I 10 I 1
s Tapirus_terrestris.TapTer_scaffold_14939                  55366 21 +     99546 ----------------------------------------G-TGC----TA-T-GT--G-------T--G--TG---TC--A--TA--G---A
i Tapirus_terrestris.TapTer_scaffold_14939              I 10 I 1
s Tarsius_lariang.k141_609102                               23996 46 +     42269 A-A-AGTAG-GC-T------AA-GATCTGAC--TGT----A-TGCCT--TA-T-GT--G-------T--A--TG---CC--A--TA--G---A
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               57312 46 +     65473 A-A-AGTAG-GC-T------AA-GATCTGAC--TGT----A-TGCCT--TA-T-GT--G-------T--A--TG---CC--A--TA--G---A
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194004627 46 - 194193292 A-A-AGTAG-GC-T------GA-GATCTGAC--TGT----A-TGCTC--TG-A-GT--G-------A--G--tg---tc--a--ta--a---a
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             36867 26 -     47444 ---------------------------------TGT----C-TGCAC--TA-T-AT--A-------T--A--TG---CC--A--CA--G---A
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         I 11 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  1574 49 +      6782 A-A-ACTAG-GC-C------AA-GATCTGAG--TAT----A-TGCTT--TA-T-AT--G-------T--G--TGNNNTC--G--GA--G---A
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  133830 48 -    259118 A-A-TCAAG-GC-T------AA-GATATAAG--TGT----A-TGC--CCTA-T-GT--G-------T--G--TG---TC--A--TAGAG---A
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 I 1
s Trachypithecus_auratus.k141_738098                        23707 46 +     38948 A-A-AGTAG-GC-T------CA-GATCTGAC--TGT----A-TGCCC--TA-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   17434 46 -     32910 A-A-AGTAG-GC-T------CA-GATCTGAC--TGT----A-TGCCC--TA-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       23332 46 +     24652 A-A-AGTAG-GC-T------CA-GATCTGAC--TGT----A-TGCCC--TA-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      2210 46 -      3559 A-A-AGTAG-GC-T------CA-GATCTGAC--TGT----A-TGCCC--TA-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           40156 46 -     54611 A-A-AGTAG-GC-T------CA-GATCTGAC--TGT----A-TGCCC--TA-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       16154 46 +     17312 A-A-AGTAG-GC-T------CA-GATCTGAC--TGT----A-TGCCC--TA-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    23518 46 -     25040 A-A-AGTAG-GC-T------CA-GATCTGAC--TGT----A-TGCCC--TA-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          2179 46 +      3528 A-A-AGTAG-GC-T------CA-GATCTGAC--TGT----A-TGCCC--TA-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  48546 46 +     51589 A-A-AGTAG-GC-T------CA-GATCTGAC--TGT----A-TGCCC--TA-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       11722 46 +     14732 A-A-AGTAG-GC-T------CA-GATCTGAC--TGT----A-TGCCC--TA-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       2199 46 -     28054 A-A-AGTAG-GC-T------CA-GATCTGAC--TGT----A-TGCCC--TA-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44656994 46 -  44834318 A-A-AGTAG-GC-T------CA-GATCTGAC--TGT----A-TGCCC--TA-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        2004 46 +      3372 A-A-AGTAG-GC-T------CA-GATCTGAC--TGT----A-TGCCC--TA-A-GT--G-------A--G--TG---TC--A--TA--A---A
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   3166 48 +     90398 A-A-ACTAA-GC-T------AA-AATCTGAG--TGT----A-TGC--CCTG-T-GT--G-------T--G--TG---TC--A--TA--GAG-A
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 I 2
s Trichechus_manatus.JH594618.1                          16079273 48 +  31416278 A-A-ACTGG-GC-T------AA-AATCTGAG--GGT----A-TGCTTTACG-T-GT--G-------T--G--TG---cc--a--ta--g---a
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2789668 46 -   3938065 A-A-ACTAG-GC-A------AA-GATCTGAG--TAT----A-TGCCC--TA-T-GT--G-------C--A--Tg---tc--a--ta--g---a
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    2188 46 +     13056 A-A-ACTAG-GC-A------AA-GATCTGAG--TAT----A-TGCCC--TA-T-GT--G-------C--A--TG---TC--A--GA--G---A
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69311394 46 -  96451834 A-A-AGTAG-GC-T------AA-GATCTGAG--TGT----A-TGC--TCTG----T--G-------T--G--tg---tc--a--ta--g-aga
i Tursiops_truncatus.MRVK01000923.1                     C 0 I 3
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 24514 46 -     25548 A-A-AGCAG-GC-A------AA-GATTTGAC--TAG----A-TGA--CC-GAT-GT--G-------T--G--TG---TC--A--CA--G---A
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 I 4
s Ursus_maritimus.KK498671.1                              6512131 46 +  28682327 A-A-ACTAT-GC-T------AA-GATCTGAG--TGT----A-TGC--CCT----AT--G-------T--A--tg---tc--a--ta--g-ggg
i Ursus_maritimus.KK498671.1                            C 0 I 2
s Varecia_rubra.k141_432109                                  2765 46 -     20643 A-A-ACTAA-AC-T------AA-GATCTGAT--TGT----A-TGTCC--TA-G-GT--G-------T--G--TG---TC--A--TA--G---A
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             22309 46 -     33872 A-A-ACTAA-AC-T------AA-GATCTGAT--TGT----A-TGTCC--TA-G-GT--G-------T--G--TG---TC--A--TA--G---A
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1522642 27 -   2331223 ----------------------------------------A-TGC--CCTA-T-GT--G-------T--G--tg---tcata--ca--g-aaa
i Vicugna_pacos.KN269600.1                              I 23 I 1
s Vulpes_lagopus.VulLag_flattened_line_2045                135075 46 -    281493 A-A-ACTAG-GC-T------AA-GATCTGAG--TGT----A-TGC--CCT----AT--G-------T--G--TG---TC--A--TA--GAG-A
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 I 2
s Xerus_inauris.XerIna_scaffold_7898                       124552 46 -    134049 A-A-ACCGG-GG-C------TG-GATCTGAG--TGG----A-TGCTT--TA-T-GT--G-------T--A--TA---TC--A--TA--G---A
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        211603 49 -    227762 A-A-ACTAG-GC-T------AA-GATCTGAG--TGT----A-TTT--CCTC-T-AT--G-------T--G--TG---TC--A--TA--GAGGA
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 I 1
s Zapus_hudsonius.ZapHud_scaffold_64392                     12793 43 -     20485 A-A-ACTGT-TT-C------CA-GACATA----CAC----A-TGCCTCAT----AT--G-------C--A--TG---TC--A--TA--G----
i Zapus_hudsonius.ZapHud_scaffold_64392                 I 1 I 1
s Ziphius_cavirostris.ZipCav_flattened_line_127025           4889 46 -      8775 A-A-AGTAG-GC-T------AA-GATCTGAG--TGT----A-TGC--CCTG----T--G-------T--G--TG---TC--A--TA--GAG-A
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 I 3

a score=0.000000
s hg38.chr4_GL000008v2_random                                9295  3 +    209709 G-----A--------A
s Acinonyx_jubatus.LLWD01000356.1                         2031373  2 +   3721120 ------a--------a
i Acinonyx_jubatus.LLWD01000356.1                       I 1 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    109954  5 -    189883 GGA---G--------A
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10654693  2 +  23371972 ------a--------a
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 1 C 0
s Ailurus_fulgens.LNAC01000003.1                          7091419  2 -  16596857 ------a--------a
i Ailurus_fulgens.LNAC01000003.1                        I 1 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   10388  2 -     22067 ------A--------A
i Allactaga_bullata.AllBul_scaffold_70162               I 1 C 0
s Allenopithecus_nigroviridis.k141_3103707                  60313  3 +     61638 G-----A--------A
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        52121  3 +     53391 G-----A--------A
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         2846  3 +     72529 G-----A--------A
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          2421  3 +      3797 G-----A--------A
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             7597  3 -     18050 G-----A--------A
i Alouatta_belzebul.k141_1818029                        I 13 C 0
s Alouatta_caraya.k141_5460                                  8708  3 -     11521 G-----A--------A
i Alouatta_caraya.k141_5460                             I 13 C 0
s Alouatta_discolor.k141_811576                              8274  3 -     21359 G-----A--------A
i Alouatta_discolor.k141_811576                         I 13 C 0
s Alouatta_juara.k141_1856473                                6651  3 +      7227 G-----A--------A
i Alouatta_juara.k141_1856473                           I 13 C 0
s Alouatta_macconnelli.k141_1331706                          7565  3 -     10438 G-----A--------A
i Alouatta_macconnelli.k141_1331706                     I 13 C 0
s Alouatta_nigerrima.k141_2718643                            4221  3 +      7047 G-----A--------A
i Alouatta_nigerrima.k141_2718643                       I 13 C 0
s Alouatta_palliata.k141_1316127                             7507  3 +     10410 G-----A--------A
i Alouatta_palliata.k141_1316127                        I 13 C 0
s Alouatta_puruensis.k141_1284840                            1310  3 -      4927 G-----A--------A
i Alouatta_puruensis.k141_1284840                       I 13 C 0
s Alouatta_seniculus.k141_990213                             4238  3 +      6429 G-----A--------A
i Alouatta_seniculus.k141_990213                        I 13 C 0
s Ammotragus_lervia.NIVO01013474.1                        3518141  2 +   4113121 ------A--------A
i Ammotragus_lervia.NIVO01013474.1                      I 2 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      388319  1 -    631301 ------A---------
i Anoura_caudifer.AnoCau_scaffold_422                   I 1 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            28742  2 +     33004 ------A--------A
i Antilocapra_americana.AntAmePen_scaffold_42841        I 2 C 0
s Aotus_azarae.k141_3170768                                 59969  3 +     78111 G-----A--------A
i Aotus_azarae.k141_3170768                             C 0 I 9
s Aotus_griseimembra.k141_3275623                            2896  3 +     22701 G-----A--------A
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5746854  3 +   9889416 g-----a--------a
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             3439  3 -    104377 G-----A--------A
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               3445  3 +     23246 G-----A--------A
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     1457  1 +      5067 ---------------A
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      15407  1 +     17483 ---------------A
i Arctocebus_calabarensis.k141_1161114                  I 2 I 2
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 6712  1 -     29036 ------A---------
i Artibeus_jamaicensis.ArtJam_scaffold_41619            I 1 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9536707  3 +  39197703 G-----A--------A
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             57991  3 +     85812 G-----A--------A
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 8990  3 +     89302 G-----A--------A
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             13495  3 -     58268 G-----A--------A
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             61486  3 +    119057 G-----A--------A
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               3437  3 -     25888 G-----A--------A
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 4188  3 -     16375 A-----A--------A
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                               508  3 +      2719 A-----A--------A
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26378159  2 +  51448160 ------a--------g
i Balaenoptera_acutorostrata.KI537095.1                 I 3 C 0
s Balaenoptera_bonaerensis.DF502048.1                        3390  2 -     13118 ------a--------g
i Balaenoptera_bonaerensis.DF502048.1                   I 3 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   41237  2 -     72089 ------A--------A
i Beatragus_hunteri.BeaHun_scaffold_21644               I 2 C 0
s Bison_bison.KN264915.1                                  6557248  2 +   6870073 ------A--------A
i Bison_bison.KN264915.1                                I 2 C 0
s Bos_indicus.CM003021.1                                138137487  2 - 161108492 ------A--------A
i Bos_indicus.CM003021.1                                I 2 C 0
s Bos_mutus.JH883513.1                                     569861  2 -    998990 ------A--------A
i Bos_mutus.JH883513.1                                  I 2 C 0
s Bos_taurus.CM000177.6                                 136293220  2 - 158972876 ------A--------A
i Bos_taurus.CM000177.6                                 I 2 C 0
s Bubalus_bubalis.KI419065.1                              1228976  2 -   1914593 ------A--------A
i Bubalus_bubalis.KI419065.1                            I 2 C 0
s Cacajao_ayresi.k141_724503                               111330  3 -    171031 G-----A--------A
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 10356  3 +    125063 G-----A--------A
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                12404  3 -    216513 G-----A--------A
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        4944  3 -    134917 G-----A--------A
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3217560  2 -   8989139 ------a--------a
i Camelus_bactrianus.KN276303.1                         I 1 C 0
s Camelus_dromedarius.KN271192.1                           395264  2 -  15254737 ------a--------a
i Camelus_dromedarius.KN271192.1                        I 1 C 0
s Camelus_ferus.KB016973.1                                2970998  2 +   6889770 ------a--------a
i Camelus_ferus.KB016973.1                              I 1 C 0
s CanFam4.chr31                                          11516077  2 +  39901454 ------A--------A
i CanFam4.chr31                                         I 2 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   11095  2 +     87036 ------A--------A
i Canis_lupus_VD.CanFam_VD_scaffold_16982               I 2 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11262738  2 -  35597290 ------a--------a
i Canis_lupus_dingo.QKWQ01001993.1                      I 2 C 0
s Canis_lupus_familiaris.chr31                           11085267  2 +  39895921 ------a--------a
i Canis_lupus_familiaris.chr31                          I 2 C 0
s Canis_lupus_orion.HG994411.1                           16452291  2 -  44759192 ------a--------a
i Canis_lupus_orion.HG994411.1                          I 2 C 0
s Capra_aegagrus.CM003214.1                              21323246  2 + 157394656 ------A--------A
i Capra_aegagrus.CM003214.1                             I 2 C 0
s Capra_hircus.CM004562.1                               135704473  2 - 157403528 ------A--------A
i Capra_hircus.CM004562.1                               I 2 C 0
s Capromys_pilorides.CapPil_scaffold_4580981                   25  5 +       203 GGA---A--------A
i Capromys_pilorides.CapPil_scaffold_4580981            N 0 N 0
s Carlito_syrichta.NW_007248099.1                          306560  4 +    345090 a----aa--------a
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               57511  1 +     67245 ------A---------
i Carollia_perspicillata.CarPer_scaffold_4436           I 1 C 0
s Castor_canadensis.CasCan_scaffold_47037                   27995  2 +     33760 ------A--------A
i Castor_canadensis.CasCan_scaffold_47037               I 1 I 84
s Catagonus_wagneri.CatWag_scaffold_1305                   156805  2 -    276539 ------A--------A
i Catagonus_wagneri.CatWag_scaffold_1305                I 1 C 0
s Cavia_aperea.AVPZ01000278.1                            15784159  5 -  24422027 g---gaa--------a
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15796091  5 -  24440124 g---gaa--------a
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       174282  5 +    436027 GGA---A--------A
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18888182  3 -  29618158 G-----A--------A
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 5726  3 -     26817 G-----A--------A
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                 9969  3 +     25043 G-----A--------A
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         5597  4 +     21754 GA----A--------A
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4361286  2 +   7569818 ------a--------a
i Ceratotherium_simum.JH767818.1                        I 1 I 2
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         1041  2 -      9338 ------A--------A
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    I 1 I 2
s Cercocebus_atys.KQ010443.1                              6552105  3 +   6739814 g-----a--------a
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      53582  3 -     54931 G-----A--------A
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         18566  3 -     19697 G-----A--------A
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         56097  3 -    107033 G-----A--------A
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        2542  3 -      3853 G-----A--------A
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          26475  3 +     30494 G-----A--------A
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           2499  3 -      4022 G-----A--------A
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          2392  3 -      3505 G-----A--------A
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           21182  3 +     35983 G-----A--------A
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11987718  3 +  12117833 G-----A--------A
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46474471  3 +  46592721 G-----A--------A
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      32298  3 +     33420 G-----A--------A
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        2334  3 -      3443 G-----A--------A
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      3325  3 -      4669 G-----A--------A
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        3120  3 -      4411 G-----A--------A
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         2650  3 -      4205 G-----A--------A
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_1070855           862  5 -      1715 GAA---A--------A
i Chaetophractus_vellerosus.ChaVel_scaffold_1070855     C 0 I 1
s Cheirogaleus_major.k141_1157592                           56493  2 -     68416 ------A--------A
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            5534  3 +     13308 A-----A--------A
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             3000  3 -     18223 G-----A--------A
i Cheracebus_lucifer.k141_619653                        I 13 C 0
s Cheracebus_lugens.k141_203936                             20023  3 +     25473 G-----A--------A
i Cheracebus_lugens.k141_203936                         I 13 C 0
s Cheracebus_regulus.k141_2128895                           39062  3 +     57117 G-----A--------A
i Cheracebus_regulus.k141_2128895                       I 13 C 0
s Cheracebus_torquatus.k141_315545                          43737  3 +     54541 G-----A--------A
i Cheracebus_torquatus.k141_315545                      I 13 C 0
s Chinchilla_lanigera.JH721867.1                         15959328  5 +  43084221 g---aaa--------a
i Chinchilla_lanigera.JH721867.1                        C 0 I 1
s Chiropotes_israelita.k141_1189915                         68551  3 +    196370 G-----A--------A
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          12732  3 +     40510 G-----A--------A
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15135932  3 -  15256731 G-----A--------A
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      30978  3 -     53260 G-----A--------A
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101141427  3 + 101219884 g-----a--------a
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                14461  5 -     21363 GGA---A--------A
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           759771  5 +    964067 g---gaa--------a
i Choloepus_hoffmanni.KN194586.1                        C 0 I 1
s Chrysochloris_asiatica.ChrAsi_scaffold_141308              6569  8 -     12508 GAAAAAA--------G
i Chrysochloris_asiatica.ChrAsi_scaffold_141308         C 0 I 17
s Colobus_angolensis.KN985967.1                          10880006  3 +  10971483 g-----a--------a
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147661164  3 + 156195979 G-----A--------A
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            13151  3 +     23629 G-----A--------A
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60610767  3 +  78930452 ------a-------aa
i Condylura_cristata.JH655880.1                         I 4 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         37223  3 -     40477 ------A-A------C
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     I 1 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 275043  5 -    399297 GGA---A--------A
i Cricetomys_gambianus.CriGam_scaffold_949              I 1 C 0
s Cricetulus_griseus.LT883672.1                          53026579  2 +  72327488 ------A--------A
i Cricetulus_griseus.LT883672.1                         I 2 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             17705  2 -     19186 ------G--------G
i Crocidura_indochinensis.CroInd_scaffold_38409         I 1 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            49385  2 -     70449 ------A--------A
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 1 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  205749  6 -    956709 GGGA--A--------A
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 28106  5 -     67205 GGA---A--------A
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                14936  5 +     26546 GGA---A--------A
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             56416  7 -    236241 GAATA-A--------A
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          179672  5 -   6883506 g---aaa--------a
i Dasypus_novemcinctus.JH568778.1                       C 0 I 1
s Daubentonia_madagascariensis.ctg11                     16842361  3 +  31942871 A-----A--------A
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80034843  2 -  96802777 ------a--------a
i Delphinapterus_leucas.KZ290064.1                      I 3 C 0
s Desmodus_rotundus.KZ672188.1                           18696821  1 -  18957592 ------a---------
i Desmodus_rotundus.KZ672188.1                          I 1 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 319945  2 +    993696 ------a--------a
i Dicerorhinus_sumatrensis.PEKH010003161.1              I 1 I 2
s Diceros_bicornis.DicBicMic_scaffold_9545                    587  2 +    151128 ------A--------A
i Diceros_bicornis.DicBicMic_scaffold_9545              I 1 I 2
s Dinomys_branickii.DinBra_scaffold_1996                   155213  5 +    228994 GGA---A--------A
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3652963  2 +   4240102 ------a--------a
i Dipodomys_ordii.KN672545.1                            I 1 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 24522  2 +     28912 ------A--------A
i Dipodomys_stephensi.DipSte_scaffold_44365             I 1 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                33679  5 -     73477 G---GGA--------A
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.AAIY02274224.1                            355  8 +      1655 GGGGTGA--------A
i Echinops_telfairi.AAIY02274224.1                      C 0 I 14
s Eidolon_helvum.KE772537.1                                 10191  2 +     24177 ------a--------a
i Eidolon_helvum.KE772537.1                             I 1 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1489504  2 +   1727528 ------A--------A
i Elaphurus_davidianus.JRFZ01086400.1                   I 2 C 0
s Elephantulus_edwardii.JH947210.1                        7804261  4 +  15467074 a----ag--------a
i Elephantulus_edwardii.JH947210.1                      C 0 I 14
s Ellobius_lutescens.LOEQ01003611.1                        237236  2 -    369425 ------A--------A
i Ellobius_lutescens.LOEQ01003611.1                     I 2 C 0
s Ellobius_talpinus.LOJH01090055.1                           4249  2 -      7838 ------A--------A
i Ellobius_talpinus.LOJH01090055.1                      I 2 C 0
s Enhydra_lutris.KZ291749.1                              85869148  2 +  99434291 ------a--------a
i Enhydra_lutris.KZ291749.1                             I 1 I 2
s Eptesicus_fuscus.JH977687.1                             4701780  1 +   6522550 ------a---------
i Eptesicus_fuscus.JH977687.1                           I 1 I 1
s Equus_asinus.JREZ01000062.1                             5850683  2 -   7175178 ------a--------a
i Equus_asinus.JREZ01000062.1                           I 1 I 1
s Equus_caballus.CM000402.2                              13349185  2 +  41866177 ------a--------a
i Equus_caballus.CM000402.2                             I 1 I 1
s Equus_przewalskii.ATBW01073585.1                          10675  2 +     92910 ------a--------a
i Equus_przewalskii.ATBW01073585.1                      I 1 I 1
s Erinaceus_europaeus.JH835290.1                         11530483  2 +  16010500 ------a--------a
i Erinaceus_europaeus.JH835290.1                        I 1 I 1
s Erythrocebus_patas.Contig8                             48768110  3 -  48907691 G-----A--------A
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          313045  2 +    330699 ------A--------G
i Eschrichtius_robustus.EscRob_flattened_line_685       I 3 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             59475  2 +     89355 ------A--------G
i Eubalaena_japonica.EubJap_flattened_line_7756         I 3 C 0
s Eulemur_albifrons.k141_715837                              2542  3 +     13586 A-----A--------A
i Eulemur_albifrons.k141_715837                         C 0 I 1
s Eulemur_collaris.k141_311830                               2477  2 -      6809 ------A--------A
i Eulemur_collaris.k141_311830                          C 0 I 2
s Eulemur_coronatus.k141_3240342                             8950  3 +     36558 A-----A--------A
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             5266  3 +     60246 A-----A--------A
i Eulemur_flavifrons.k141_903901                        C 0 I 2
s Eulemur_fulvus.k141_653297                                 8749  3 +    109717 A-----A--------A
i Eulemur_fulvus.k141_653297                            C 0 I 2
s Eulemur_macaco.k141_1341545                               13128  3 +     16540 A-----A--------A
i Eulemur_macaco.k141_1341545                           C 0 I 2
s Eulemur_mongoz.k141_825972                                13404  3 +     27497 A-----A--------A
i Eulemur_mongoz.k141_825972                            C 0 I 2
s Eulemur_rubriventer.k141_411740                           15866  5 +     26808 A-----A-A-----AA
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                30594  3 +     46535 A-----A--------A
i Eulemur_rufus.k141_1620292                            C 0 I 2
s Eulemur_sanfordi.k141_186399                              13317  3 -     29447 A-----A--------A
i Eulemur_sanfordi.k141_186399                          C 0 I 2
s Felis_catus.CM001386.2                                129890350  2 - 159252932 ------a--------a
i Felis_catus.CM001386.2                                I 1 C 0
s Felis_catus_fca126.CM031420.1                         129277425  2 - 158578461 ------a--------a
i Felis_catus_fca126.CM031420.1                         I 1 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 18560  2 +     52776 ------A--------A
i Felis_nigripes.FelNig_flattened_line_8080             I 1 C 0
s Fukomys_damarensis.KN123630.1                          13890281  5 -  19261668 g---aaa--------a
i Fukomys_damarensis.KN123630.1                         I 8 C 0
s Galago_moholi.ctg555                                     208457  3 -    847004 A-----A--------A
i Galago_moholi.ctg555                                  C 0 I 2
s Galago_senegalensis.k141_964197                           10838  3 -     43889 A-----A--------A
i Galago_senegalensis.k141_964197                       C 0 I 2
s Galagoides_demidoff.k141_1769638                           7902  3 +     27357 A-----A--------A
i Galagoides_demidoff.k141_1769638                      C 0 I 2
s Galeopterus_variegatus.GalVar_scaffold_354               153816  6 +    324696 GGGA--A--------A
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    179021  2 -    189561 ------A--------A
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 2 C 0
s Glis_glis.GliGli_scaffold_79770                           10227  1 -     18683 ---------------A
i Glis_glis.GliGli_scaffold_79770                       I 7 C 0
s Gorilla_beringei.k141_111300                               2698  3 -     14630 G-----A--------A
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119649797  3 - 195582420 g-----a--------a
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   74756  1 +    118900 ---------------A
i Graphiurus_murinus.GraMur_scaffold_4493               I 4 C 0
s Hapalemur_alaotrensis.k141_1198205                         3099  3 +      3980 A-----A--------A
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             25574  3 +     26611 A-----A--------A
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             3036  3 +     56096 A-----A--------A
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        26311  3 -     42470 A-----A--------A
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        42905  3 -     54384 A-----A--------A
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              14594  2 +     53719 ------A--------A
i Helogale_parvula.HelPar_flattened_line_22962          I 19 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                25517  2 -     91191 ------A--------A
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 2 C 0
s Heterocephalus_glaber.JH602058.1                        2548665  6 +  31725842 g---gaa-------aa
i Heterocephalus_glaber.JH602058.1                      I 8 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               54065  6 +     73687 GGAA--A--------A
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              145083  2 +    277961 ------A--------A
i Hippopotamus_amphibius.HipAmp_scaffold_1308           I 3 C 0
s Hipposideros_armiger.JXIK01001085.1                      276420  2 -    477199 ------a--------a
i Hipposideros_armiger.JXIK01001085.1                   I 14 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              5579  2 -      9143 ------A--------A
i Hipposideros_galeritus.HipGal_scaffold_104691         I 14 C 0
s Hoolock_leuconedys.ctg79                                       595  3 -   7690867 G-----A--------A
i Hoolock_leuconedys.ctg79                                 I 137 I 1726
s Hyaena_hyaena.HyaHya_flattened_line_20729                 13648  2 -     67322 ------A--------A
i Hyaena_hyaena.HyaHya_flattened_line_20729             I 1 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16578  5 -    119109 GAA---A--------A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 I 1
s Hylobates_abbotti.k141_493872                              2516  3 +      5897 G-----A--------A
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_282275                               1729  3 +      1846 G-----A--------A
i Hylobates_agilis.k141_282275                          C 0 n 0
s Hylobates_klossii.k141_584463                               892  3 -      1009 G-----A--------A
i Hylobates_klossii.k141_584463                         I 46 n 3
s Hylobates_pileatus_b.ContigUN                                 14622061  3 -  25970782 G-----A--------A
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1133650                            1950  3 -      2775 G-----A--------A
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             30553  3 -     60944 G-----A--------A
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     3715  5 +     22540 GGA---A--------A
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7123584  1 +  13083262 ---------------A
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_1884019                                    776  3 -      2196 A-----A--------A
i Indri_indri.k141_1884019                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               6832  2 +     17520 ------A--------A
i Inia_geoffrensis.IniGeo_flattened_line_66725          I 3 C 0
s Jaculus_jaculus.JH725517.1                              8563128  2 +  11848649 ------A--------A
i Jaculus_jaculus.JH725517.1                            I 1 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               21661  4 +     37189 ------A-A-----AA
i Kogia_breviceps.KogBre_flattened_line_35920           I 3 C 0
s Lagothrix_lagothricha.k141_12968                          47561  3 -    147782 G-----A--------A
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   111575  1 -    115756 ------A---------
i Lasiurus_borealis.LasBor_scaffold_5102                I 1 C 0
s Lemur_catta.scaffold_1                                258404594  3 - 285822530 A-----A--------A
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        21466  3 +     39228 A-----A--------A
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            50839  3 +     63517 A-----A--------A
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        76082  2 +    116806 ------A--------A
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     29104  3 -     33031 A-----A--------A
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3083363  2 -   3498232 ------a--------a
i Leptonychotes_weddellii.KB714749.1                    I 1 C 0
s Lepus_americanus.LepAme_scaffold_62849                    10571  6 +     22452 T--TTTA--------A
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            133990  2 +   3060487 ------a--------a
i Lipotes_vexillifer.KE558548.1                         I 3 C 0
s Lophocebus_aterrimus.ctg55                             19245193  3 +  19376315 G-----A--------A
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            8205  3 +     84689 A-----A--------A
i Loris_lydekkerianus.k141_550999                       C 0 I 2
s Loris_tardigradus.ctg97                                 3775956  3 +   6799190 A-----A--------A
i Loris_tardigradus.ctg97                               C 0 I 2
s Loxodonta_africana.GL010040.1                          20588847  1 -  62548349 ---------------a
i Loxodonta_africana.GL010040.1                         I 4 C 0
s Lycaon_pictus.CM007556.1                               11084723  2 +  39895028 ------a--------a
i Lycaon_pictus.CM007556.1                              I 2 C 0
s Macaca_arctoides.k141_2201161                             16879  3 +     74745 G-----A--------A
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12703385  3 +  12821369 G-----A--------A
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               5481  3 +      6569 G-----A--------A
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           43783  3 +     63263 G-----A--------A
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_1068107                               12359  3 +     12679 G-----A--------A
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                1932  3 +      3017 G-----A--------A
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  43544  3 -     79256 G-----A--------A
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196032462  3 + 196197964 G-----A--------A
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11442568  3 +  11645122 G-----A--------A
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   2491  3 -     46448 G-----A--------A
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                2322  3 -      3617 G-----A--------A
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 12654  3 -     55006 G-----A--------A
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43837691  3 +  43892939 G-----A--------A
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                4913  3 -      5978 G-----A--------A
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               2496  3 -     27140 G-----A--------A
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                699609  1 +    802869 ------A---------
i Macroglossus_sobrinus.MacSob_scaffold_879             I 1 C 0
s Mandrillus_leucophaeus.scaffold125                     43434353  3 -  43563597 G-----A--------A
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4447179  3 -   4543643 G-----A--------A
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            144098  2 +    252755 ------A--------A
i Manis_javanica.JSZB01003966.1                         I 15 C 0
s Manis_pentadactyla.KN017078.1                             34173  2 +     58827 ------A--------A
i Manis_pentadactyla.KN017078.1                         I 15 C 0
s Marmota_marmota.CZRN01000005.1                         36871424  1 +  64221397 ---------------A
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       62261  3 -    234502 ------A-A------A
i Megaderma_lyra.MegLyr_scaffold_3562                   I 1 C 0
s Mellivora_capensis.MelCap_flattened_line_1828            226639  2 -    226874 ------A--------A
i Mellivora_capensis.MelCap_flattened_line_1828         I 1 I 1
s Meriones_unguiculatus.MerUng_scaffold_52233                9531  5 +     15977 GAA---A--------A
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1044320  2 -  26018355 ------A--------A
i Mesocricetus_auratus.KB708139.1                       I 2 C 0
s Mesoplodon_bidens.MesBid_scaffold_183284                   1700  4 +      2166 ------A-A-----AA
i Mesoplodon_bidens.MesBid_scaffold_183284              I 3 C 0
s Microcebus_murinus.CM007691.1                          16507714  3 +  47401472 a-----a--------a
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               20688  1 -     32043 ------A---------
i Micronycteris_hirsuta.MicHir_scaffold_37978           I 1 C 0
s Microtus_ochrogaster.CM001673.1                        22817437  2 -  98408828 ------A--------A
i Microtus_ochrogaster.CM001673.1                       I 2 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8207448  2 +  10048721 ------a--------a
i Miniopterus_natalensis.LDJU01000022.1                 I 1 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            32119  2 +     45743 ------A--------A
i Miniopterus_schreibersii.MinSch_scaffold_24116        I 1 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  28985  1 -     48017 G---------------
i Microgale_talazaci.MicTal_scaffold_34660              C 0 I 25
s Miopithecus_ogouensis.k141_2666161                        33012  3 +     34273 G-----A--------A
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         8666  2 -    104932 ------A--------A
i Mirounga_angustirostris.MirAng_flattened_line_8852    I 1 I 1
s Mirza_zaza.k141_226143                                     3119  3 +      8497 A-----A--------A
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 144427  2 +    154973 ------A--------A
i Monodon_monoceros.MonMon_M_scaffold_5598              I 3 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                159199  1 +    265003 ------A---------
i Mormoops_blainvillei.MorMeg_scaffold_2952             I 1 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 2607  2 -      4346 ------A--------A
i Moschus_moschiferus.MosMos_scaffold_146101            I 2 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  142289  2 -    168139 ------A--------A
i Mungos_mungo.MunMun_flattened_line_8729               I 19 C 0
s Murina_feae.MurFea_scaffold_2254                          17090  2 -    100666 ------A--------A
i Murina_feae.MurFea_scaffold_2254                      I 1 C 0
s Mus_caroli.LT608236.1                                  70763948  4 +  92629107 GAA---A---------
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75486983  5 +  98207768 GGA---A--------A
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67553155  5 +  89017189 g---aaa--------a
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74328162  5 +  97876770 g---aaa--------a
i Mus_spretus.CM004110.1                                C 0 C 0
s Mustela_putorius.JH417978.1                             4421531  2 -  28371801 ------a--------a
i Mustela_putorius.JH417978.1                           I 1 I 1
s Myotis_brandtii.KE161952.1                               965411  1 +   8389877 ------a---------
i Myotis_brandtii.KE161952.1                            I 1 C 0
s Myotis_davidii.KB114863.1                               5017102  1 +   6462685 ------a---------
i Myotis_davidii.KB114863.1                             I 1 C 0
s Myotis_lucifugus.GL429887.1                             3462998  1 -   3747815 ------A---------
i Myotis_lucifugus.GL429887.1                           I 1 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         8193  1 +     66751 ------A---------
i Myotis_myotis.MyoMyo_scaffold_6123                    I 1 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3064  4 -      8794 GAA---A---------
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            108040  5 +    362372 a---aaa--------a
i Nannospalax_galili.KL201303.1                         I 13 C 0
s Nasalis_larvatus.k141_153429                               5391  3 +     48152 G-----A--------A
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4482266  2 -  14209539 ------a--------a
i Neomonachus_schauinslandi.NINY01007774.1              I 1 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3949038  3 -   4490290 ------a-------aa
i Neophocaena_asiaeorientalis.KZ688543.1                I 3 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  47315  2 +     94413 ------A--------A
i Noctilio_leporinus.NocLep_scaffold_12062              I 1 C 0
s Nomascus_annamensis.k141_1223136                          11184  3 -     11253 G-----A--------A
i Nomascus_annamensis.k141_1223136                      I 141 n 3
s Nomascus_concolor.k141_49591                                486  3 +      2014 G-----A--------A
i Nomascus_concolor.k141_49591                          C 0 C 0
s Nomascus_gabriellae.k141_906566                            1814  3 -      2544 G-----A--------A
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             22290  3 -  18771707 G-----A--------A
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_844529                                  1565  3 +      2124 G-----A--------A
i Nomascus_siki_a.k141_844529                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                27716  2 +   3668941 ------a--------a
i Nyctereutes_procyonoides.CAJHUB010000786.1            I 2 C 0
s Nycticebus_bengalensis.LG16                            65564551  3 -  95554990 A-----A--------A
i Nycticebus_bengalensis.LG16                           C 0 I 2
s Nycticebus_coucang.k141_2051882                            1396  3 +      6470 A-----A--------A
i Nycticebus_coucang.k141_2051882                       C 0 I 2
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65666921  3 +  89412551 A-----A--------A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 I 2
s Ochotona_princeps.JH802095.1                            4993554  5 -  23139505 t---tta--------a
i Ochotona_princeps.JH802095.1                          I 11 C 0
s Octodon_degus.JH651621.1                                3683132  2 +  10294119 ------G--------A
i Octodon_degus.JH651621.1                              I 918 C 0
s Odobenus_rosmarus.KB229369.1                             676923  2 -   3126709 ------a--------a
i Odobenus_rosmarus.KB229369.1                          I 2 C 0
s Odocoileus_virginianus.KZ101650.1                       1077735  2 +   1425656 ------A--------A
i Odocoileus_virginianus.KZ101650.1                     I 2 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         34891  2 +     78940 ------A--------A
i Okapia_johnstoni.LVCL01S0017931.1                     I 2 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  122713  2 +    145789 ------A--------A
i Ondatra_zibethicus.OndZib_scaffold_6821               I 2 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  34467  2 +     62360 ------A--------A
i Onychomys_torridus.OnyTor_scaffold_12578              I 2 C 0
s Orcinus_orca.KB316965.1                                 7222724  1 -   7562323 ---------------a
i Orcinus_orca.KB316965.1                               I 3 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              41103  4 -     66828 GA----A--------A
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 I 14
s Oryctolagus_cuniculus.CM000803.1                      141873227  6 + 163896628 t--ttta--------a
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      305055  2 -    505867 ------a--------a
i Otocyon_megalotis.JAEUCK010005121.1                   I 2 C 0
s Otolemur_crassicaudatus.k141_321880                       36545  3 +     38679 A-----A--------A
i Otolemur_crassicaudatus.k141_321880                   C 0 I 2
s Otolemur_garnettii.GL873528.1                          18005987  3 -  38779656 A-----A--------A
i Otolemur_garnettii.GL873528.1                         C 0 I 2
s Ovis_aries.CM001582.2                                 134075310  2 - 275406953 ------A--------A
i Ovis_aries.CM001582.2                                 I 2 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      76524  2 +    140051 ------A--------A
i Ovis_canadensis.OviCan_scaffold_6251                  I 2 C 0
s Pan_paniscus.CM003386.1                               127572042  3 - 205426864 g-----a--------a
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120149195  3 - 196562556 g-----a--------a
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  31749  2 +    295523 ------A--------A
i Panthera_onca.PanOnc_flattened_line_1615              I 1 I 1
s Panthera_pardus.KV860323.1                              3635350  2 +  18214204 ------a--------a
i Panthera_pardus.KV860323.1                            I 1 I 133
s Panthera_tigris.KE721879.1                              5025131  2 -   6340057 ------a--------a
i Panthera_tigris.KE721879.1                            I 1 C 0
s Pantholops_hodgsonii.KE114631.1                         1064171  2 -   1292953 ------A--------A
i Pantholops_hodgsonii.KE114631.1                       I 2 C 0
s Papio_anubis.CM001492.2                               188153137  3 - 188283584 g-----a--------a
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            49349  3 +     76494 G-----A--------A
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47510534  3 +  47705337 G-----A--------A
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 64511  3 -    104429 G-----A--------A
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  14302  3 -     29451 G-----A--------A
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                34705  3 +     35859 G-----A--------A
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113051  2 -    135482 ------A--------A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 I 1 C 0
s Perodicticus_ibeanus.k141_117958                           2598  3 -     23713 A-----A--------A
i Perodicticus_ibeanus.k141_117958                      C 0 I 2
s Perodicticus_potto.k141_713187                            21897  3 -     27972 A-----A--------A
i Perodicticus_potto.k141_713187                        C 0 I 2
s Perognathus_longimembris.PerPac_flattened_line_22291      40516  5 -     45160 GA---GA--------A
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4947643  2 -   8017169 ------A--------A
i Peromyscus_maniculatus.KI615518.1                     I 2 C 0
s Petromus_typicus.PetTyp_scaffold_33007                     9830  5 -     36578 G---GGG--------G
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            119340  2 -    122454 ------A--------A
i Phocoena_phocoena.PhoPho_flattened_line_11948         I 3 C 0
s Piliocolobus_badius.k141_1497351                           2395  3 -      3310 G-----A--------A
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       22300  3 -     82327 G-----A--------A
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           19047  3 +     19957 G-----A--------A
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26737061  3 +  26888534 g-----a--------a
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            94861  1 +    112873 ------G---------
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        I 1 C 0
s Pithecia_albicans.k141_991845                             41044  3 -     61926 G-----A--------A
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        22473  3 +     78826 G-----A--------A
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              6424  3 -     15800 G-----A--------A
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                         9622  3 -     16101 G-----A--------A
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          2931  3 +      9673 G-----A--------A
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13471925  3 -  19735023 G-----A--------A
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           10833  3 -     31692 G-----A--------A
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           3408  2 +     21690 ------A--------A
i Platanista_gangetica.PlaMin_flattened_line_72990      I 3 C 0
s Plecturocebus_bernhardi.k141_959214                       20265  3 +     44506 G-----A--------A
i Plecturocebus_bernhardi.k141_959214                   I 13 C 0
s Plecturocebus_brunneus.k141_498086                        20475  3 +     67491 G-----A--------A
i Plecturocebus_brunneus.k141_498086                    I 13 C 0
s Plecturocebus_caligatus.k141_2539816                      10716  3 -     98129 G-----A--------A
i Plecturocebus_caligatus.k141_2539816                  I 13 C 0
s Plecturocebus_cinerascens.k141_744510                     20321  3 +    147771 G-----A--------A
i Plecturocebus_cinerascens.k141_744510                 I 13 C 0
s Plecturocebus_cupreus.k141_1223294                        20571  3 -     23762 G-----A--------A
i Plecturocebus_cupreus.k141_1223294                    I 13 C 0
s Plecturocebus_dubius.k141_3565563                          1037  3 -     55515 G-----A--------A
i Plecturocebus_dubius.k141_3565563                     I 13 C 0
s Plecturocebus_grovesi.k141_242819                         20390  3 +    152463 G-----A--------A
i Plecturocebus_grovesi.k141_242819                     I 13 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      7150  3 +      8943 G-----A--------A
i Plecturocebus_hoffmannsi.k141_1595076                 I 13 C 0
s Plecturocebus_miltoni.k141_841561                         10110  3 +    134592 G-----A--------A
i Plecturocebus_miltoni.k141_841561                     I 13 C 0
s Plecturocebus_moloch.k141_890597                          20700  3 -     75465 G-----A--------A
i Plecturocebus_moloch.k141_890597                      I 13 C 0
s Pongo_abelii.NDHI03003816.1                              184587  3 -    373494 g-----a--------a
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19804494  3 +  19899266 G-----A--------A
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               2629  3 -     15069 G-----A--------A
i Presbytis_comata.k141_672698                          I 13 C 0
s Presbytis_mitrata.k141_860013                              2763  3 +     14865 G-----A--------A
i Presbytis_mitrata.k141_860013                         I 13 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                73929  6 +     78963 GGAA--A--------A
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6845970  3 +  12164890 a-----a--------a
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    664587  3 -   2312742 N-----N--------N
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         1115  3 +     11805 A-----A--------A
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           40450  2 +     52369 ------A--------A
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         32838  3 -     44753 A-----A--------A
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            14759  3 +     27322 A-----A--------A
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       14398  3 -     53241 A-----A--------A
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         36670  3 -     48185 A-----G--------A
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           31071  5 +     77221 g---aaa--------a
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            1867  1 -     27784 ------a---------
i Pteronotus_parnellii.KE867983.1                       I 1 I 2
s Pteronura_brasiliensis.PteBra_flattened_line_1343        243624  2 -    344369 ------A--------A
i Pteronura_brasiliensis.PteBra_flattened_line_1343     I 1 I 1
s Pteropus_alecto.KB031157.1                             13243989  2 -  17261082 ------a--------a
i Pteropus_alecto.KB031157.1                            I 1 I 3
s Pteropus_vampyrus.KN525959.1                             601942  2 -   3946241 ------a--------a
i Pteropus_vampyrus.KN525959.1                          I 1 I 1
s Puma_concolor.QAVW01000427.1                          131531713  2 - 161321710 ------a--------a
i Puma_concolor.QAVW01000427.1                          I 1 C 0
s Pygathrix_cinerea.k141_374971                             26758  3 +     56732 G-----A--------A
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6803249  3 +   6970761 G-----A--------A
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             2642  3 +     18040 G-----A--------A
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                13813  2 +     68503 ------A--------A
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 2 C 0
s Rattus_norvegicus.chr11                                13913049  4 +  90463843 GAA---A---------
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1785807  2 +   2252614 ------a--------a
i Rhinolophus_sinicus.LVEH01000179.1                    I 1 C 0
s Rhinopithecus_bieti.k119_102124                           13195  3 -     14454 G-----A--------A
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206374521  3 - 206558726 g-----a--------a
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44852169  3 -  45163003 G-----A--------A
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                17282  1 +    109198 ------A---------
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            I 1 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       5619  2 +     12214 ------A--------A
i Saiga_tatarica.SaiTat_scaffold_82192                  I 2 C 0
s Saimiri_boliviensis.NW_024100938.1                     15670157  4 -  43202129 g-----a-------aa
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        2024  4 +     34089 G-----T-A------A
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              1965  4 -     60842 G-----T-A------A
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              2060  4 +     67014 G-----T-A------A
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              2038  4 +     60816 G-----T-A------A
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 1975  4 -     76454 G-----T-A------A
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17338710  3 -  30362882 G-----A--------A
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         18085  3 -     62485 G-----A--------A
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Semnopithecus_entellus.k141_1527475                       25183  3 +     26421 G-----A--------A
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       5643  3 +     20762 G-----A--------A
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         39378  3 +     40653 G-----A--------A
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                            9935  3 -     12194 G-----A--------A
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     23357  3 -     27512 G-----A--------A
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         32376  3 -     33692 G-----A--------A
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   97264  2 -    120886 ------A--------A
i Sigmodon_hispidus.SigHis_scaffold_11332               I 2 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            16012  2 +    739146 ------A--------A
i Solenodon_paradoxus.SolPar_flattened_line_1012        I 1 C 0
s Sorex_araneus.JH798170.1                               17748221 10 -  27805282 ------GGAGGGGGTG
i Sorex_araneus.JH798170.1                              I 8 C 0
s Spermophilus_dauricus.KZ294190.1                        2237500  1 +   2842873 ---------------A
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             232391  2 -    276980 ------A--------A
i Spilogale_gracilis.SpiGra_flattened_line_905          I 1 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            24953  2 +     62062 ------A--------A
i Suricata_suricatta.SurSur_flattened_line_20339        I 19 I 1
s Sus_scrofa.CM000824.4                                 189269862  2 + 218635234 ------a--------a
i Sus_scrofa.CM000824.4                                 I 13 C 0
s Symphalangus_syndactylus.tarseq_24                     13899349  3 +  13920577 G-----A--------A
i Symphalangus_syndactylus.tarseq_24                    I 46 I 631
s Tadarida_brasiliensis.TadBra_scaffold_145589               3808  2 -      6213 ------A--------A
i Tadarida_brasiliensis.TadBra_scaffold_145589          I 1 I 208
s Tamandua_tetradactyla.TamTet_scaffold_26877               12737  5 +     45698 GAA---A--------A
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      804727  2 +   1148477 ------A--------A
i Tapirus_indicus.TapInd_scaffold_176                   I 1 I 1
s Tapirus_terrestris.TapTer_scaffold_14939                  55388  2 +     99546 ------A--------A
i Tapirus_terrestris.TapTer_scaffold_14939              I 1 I 1
s Tarsius_lariang.k141_609102                               24042  3 +     42269 G-----A--------A
i Tarsius_lariang.k141_609102                           C 0 I 3
s Tarsius_wallacei.k141_48636                               57358  3 +     65473 G-----A--------A
i Tarsius_wallacei.k141_48636                           C 0 I 3
s Theropithecus_gelada.CM009951.1                       194004673  3 - 194193292 g-----a--------a
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             36893  5 -     47444 GGA---A--------G
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  1623  5 +      6782 GAA---A--------A
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 I 1
s Tonatia_saurophila.TonSau_scaffold_3334                  133879  1 -    259118 ------A---------
i Tonatia_saurophila.TonSau_scaffold_3334               I 1 C 0
s Trachypithecus_auratus.k141_738098                        23753  3 +     38948 G-----A--------A
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   17480  3 -     32910 G-----A--------A
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       23378  3 +     24652 G-----A--------A
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      2256  3 -      3559 G-----A--------A
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           40202  3 -     54611 G-----A--------A
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       16200  3 +     17312 G-----A--------A
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    23564  3 -     25040 G-----A--------A
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          2225  3 +      3528 G-----A--------A
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  48592  3 +     51589 G-----A--------A
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       11768  3 +     14732 G-----A--------A
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       2245  3 -     28054 G-----A--------A
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44657040  3 -  44834318 G-----A--------A
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        2050  3 +      3372 G-----A--------A
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   3216  2 +     90398 ------A--------A
i Tragulus_javanicus.TraJav_scaffold_14717              I 2 C 0
s Trichechus_manatus.JH594618.1                          16079321  6 +  31416278 g--aaaa--------a
i Trichechus_manatus.JH594618.1                         C 0 I 83
s Tupaia_chinensis.KB320831.1                             2789714  4 -   3938065 g----aa--------a
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    2234  4 +     13056 GA----A--------A
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69311443  1 -  96451834 ---------------a
i Tursiops_truncatus.MRVK01000923.1                     I 3 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 24564  2 -     25548 ------A--------A
i Uropsilus_gracilis.UroGra_scaffold_4143_0             I 4 C 0
s Ursus_maritimus.KK498671.1                              6512179  2 +  28682327 ------a--------a
i Ursus_maritimus.KK498671.1                            I 2 C 0
s Varecia_rubra.k141_432109                                  2811  3 -     20643 A-----A--------A
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             22355  3 -     33872 A-----A--------A
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1522670  2 -   2331223 ------a--------a
i Vicugna_pacos.KN269600.1                              I 1 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                135123  2 -    281493 ------A--------A
i Vulpes_lagopus.VulLag_flattened_line_2045             I 2 C 0
s Xerus_inauris.XerIna_scaffold_7898                       124598  1 -    134049 ---------------A
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        211653  2 -    227762 ------A--------A
i Zalophus_californianus.ZalCal_flattened_line_4097     I 1 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     12837  2 -     20485 ------A--------A
i Zapus_hudsonius.ZapHud_scaffold_64392                 I 1 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           4938  2 -      8775 ------A--------A
i Ziphius_cavirostris.ZipCav_flattened_line_127025      I 3 C 0
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   29372  4 -    114521 I
e Myocastor_coypus.MyoCoy_scaffold_3653                     87628 35 -    117718 I
e Muscardinus_avellanarius.MusAve_scaffold_9643              8720  0 +     98495 C

a score=0.000000
s hg38.chr4_GL000008v2_random                                9298 209 +    209709 A--AA--AT-TACCTTT--GAG-G-GA-G-CACAGTGATTAAATTT--AA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---T-TG--TA--TACAGTTAATGGAAGAC-ATGCTAGGC-TTCT-TGTAAGAATT-TGTTCCAGATCACTGTGTATAATTAATGGCTTGTCTACATATT-T-T---TTT-CAAT---AAA---A-CTGTTCATGAAGAATTT--TAAGTA
s Acinonyx_jubatus.LLWD01000356.1                         2031375 208 +   3721120 a--aa--at-taccttt--tgG-G-GA-G-CAGAGTGATTAAATTT--CT-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCCGTAACT-TTG-TATA-A-A---A-TG--TG--TACAGTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCTTTGTGTATAATTAATGGCTTGTctacata-t-t-t---ttt-caat---aaa---a-ctatTCATACAGAATGT--TAAGTA
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    109959 207 -    189883 A--AA--AT-TACTTCT--TTG-G-G--G-CATAGCAGTTACATTT--CT-AAGATT--TATGGC-TTAACCTCAGGAAG--AC--TTTGAGTAACT-TGG-TATA-A-A---A-TG--TA--TACATTTAATGGAAAGC-ACGCCATGC-TTCT-TATAGGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCCTGCTGAATTT--TAAGTA
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10654695 208 +  23371972 a--aa--at-taccttt--tgg-G-GA-G-CAGAGTGATTAAATTT--CT-AAGATT--TATTGT-TTAACCTCCGGAAG--AC--TTTCAGTAACT-TTG-tata-a-a---a-tg--tg--tacatttaatGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCTTTGTGTATAATTAATGGCTTGTctacata-t-t-t---ttt-caat---aaa---a-ctattCATACAGAATGT--TAAGTA
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7091421 207 -  16596857 ---aa--at-tagcttt--tgG-G-GA-G-CAGAGTGATTAAATTT--CT-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTG-TATA-A-G---A-TG--TG--TACATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCTTTGTGTATAATTAATGGCTTGTctacata-t-t-t---ttt-caat---aaa---a-ctatTCATACAGAATGT--TAAGTA
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   10390 207 -     22067 ---AA--AT-TACCTTT--GGT-G-TA-G-CACAGTAGTTAAATTT--CT-AAGATT--TATTGC-CTAACCTCAGGAAG--GT--TTTGAGTAACT-TTG-CATA-A-A---A-TG--TA--TACATTTAATGGAAAGC-ATGCTAGGC-TTCT-TATAAGAATT-GGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCCTGCTGAATTT--TAAGTA
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_3103707                  60316 207 +     61638 A--AA--AT-TACCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGAC-GTGCCATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGT-
i Allenopithecus_nigroviridis.k141_3103707              C 0 I 1
s Allochrocebus_lhoesti.k141_4825038                        52124 207 +     53391 A--AA--AT-TACCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGAC-ATGCCATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCATGCAGAATTT--TAAGT-
i Allochrocebus_lhoesti.k141_4825038                    C 0 I 1
s Allochrocebus_preussi.k141_1202907                         2849 207 +     72529 A--AA--AT-TACCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGAC-ATGCCATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCATGCAGAATTT--TAAGT-
i Allochrocebus_preussi.k141_1202907                    C 0 I 1
s Allochrocebus_solatus.k141_787528                          2424 207 +      3797 A--AA--AT-TACCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGAC-ATGCCATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCATGCAGAATTT--TAAGT-
i Allochrocebus_solatus.k141_787528                     C 0 I 1
s Alouatta_belzebul.k141_1818029                             7600 204 -     18050 A--AA--AT-TCTCT----GAG-G-GA-G-CACAGTGGTTAAGTTT--AA-AAGATT--GATTGT-TTCACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TAT--A-A---A-TG--TA--TACATTTAATGGAAGGC-ACGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGT-
i Alouatta_belzebul.k141_1818029                        C 0 I 28
s Alouatta_caraya.k141_5460                                  8711 206 -     11521 A--AA--AT-TCTCTTT--GAG-G-GA-G-CACAGTGGTTAAGTTT--AA-AAGATT--GATTGT-TTCACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TAT--A-A---A-TG--TA--TACATTTAATGGAAGGC-GCGCTATGC-TTCT-TATAAGAATT-TATTCCAAGTCACAGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTGGTGCAGAATTT--TAAGT-
i Alouatta_caraya.k141_5460                             C 0 I 28
s Alouatta_discolor.k141_811576                              8277 204 -     21359 A--AA--AT-TCTCT----GAG-G-GA-G-CACAGTGGTTAAGTTT--AA-AAGATT--GATTGT-TTCACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TAT--A-A---A-TG--TA--TACATTTAATGGAAGGC-ACGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGT-
i Alouatta_discolor.k141_811576                         C 0 I 28
s Alouatta_juara.k141_1856473                                6654 205 +      7227 A--AA--AT-TCTCT----GAG-G-GA-G-CACAGTGGTTAAGTTT--AA-AAGATT--GATTGT-TTCACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TAT--A-A---A-TG--TA--TATATTTAATGGAAGGC-ACGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGTA
i Alouatta_juara.k141_1856473                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          7568 204 -     10438 A--AA--AT-TCTC--T--GAG-A-GA-G-CACAGTGGTTAAGTTT--AA-AAGATT--GATTGT-TTCACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TAT--A-A---A-TG--TA--TACATTTAATGGAAGGC-ACGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGT-
i Alouatta_macconnelli.k141_1331706                     C 0 I 28
s Alouatta_nigerrima.k141_2718643                            4224 204 +      7047 A--AA--AT-TCTC--T--GAG-A-GA-G-CACAGTGGTTAAGTTT--AA-AAGATT--GATTGT-TTCACCTCAGGAAG--AC--TTTCAGTAACT-ATT-TAT--A-A---A-TG--TA--TACATTTAATGGAAGGC-ACGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGT-
i Alouatta_nigerrima.k141_2718643                       C 0 I 28
s Alouatta_palliata.k141_1316127                             7510 204 +     10410 A--AA--AT-TCTC--T--GAG-G-GA-G-CACAGTGGTTAAGTTT--AA-AAGATT--GATTGT-TTCACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TAT--A-A---A-TG--TA--TATATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTGGTGCAGAATTT--TAAGT-
i Alouatta_palliata.k141_1316127                        C 0 I 742
s Alouatta_puruensis.k141_1284840                            1313 204 -      4927 A--AA--AT-TCTCT----GAG-G-GA-G-CACAGTGGTTAAGTTT--AA-AAGATT--GATTGT-TTCACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TAT--A-A---A-TG--TA--TACATTTAATGGAAGGC-ACGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGT-
i Alouatta_puruensis.k141_1284840                       C 0 I 28
s Alouatta_seniculus.k141_990213                             4241 206 +      6429 A--AA--AT-TCTCTTT--GAG-G-GA-G-CACAGTGGTTAAGTTT--AA-AAGATT--GATTGT-TTCACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TAT--A-A---A-TG--TA--TACATTTAATGGAAGGC-ACACTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGT-
i Alouatta_seniculus.k141_990213                        C 0 I 28
s Ammotragus_lervia.NIVO01013474.1                        3518143 209 +   4113121 C--AA--AT-TACCTTT--GAG-G-GA-A-CAGAGTGATTAAATTT--CT-AAGATT--TATTGT-CTAATCTCAGGAAG--AC--TTTCAGTAACT-TTg-taaa-a-a---a-tg--ta--tacatttaatgGAAGGC-ATGCTATGT-TTCT-TATAAGAATT-TGTTCCAAGTCTTTGCATATAATTAATGGCTTGcctacata-t-t-tt--ttt-caat---aaa---a-ctatCCACGCAGAATTT--TAAGTA
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      388320 206 -    631301 A--AA--AA-TACTTTT--T-GGA-GA-G-CAGAGTGGCTAAATTT--CT-AAGATT--TATTTT-TTAACCTCAGATGG--AC--TTTCAATTTTT-T---TATA-A-A---A-TG--TA--TACATTTAATGGAAAGC-ACACCACAC-TTTT-TACAAGAATT-TCTTCCAAGTCTTTGTGTGTAATTAATGGCTTGCCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCATGCAGAATTT--TAAGTA
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            28744 208 +     33004 C--AA--AT-TACCTTT--GGG-G-GA-A-CAGAGTGGTTAAATTT--CT-AAGATT--TATTGT-ATAATCTCAGGAAG--AC--TTTCAGTAACT-TTG-TAAA-A-A---A-TG--TA--TACGGTTAATGGAAGGC-ATGCTATGT-TTCT-TATAAGAATT-TGTTCCAAGTCTTTGCATATAATTAATGGCTTGCCGACATA-T-T-T---TTT-CAAT---AAA---A-CTATCCACATAGAATTT--TAAGTA
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 59981 186 +     78111 -------------------------------ACAGTGGTTAAATTT--AA-AAGATT--GATTGT-TTCACCTCAGGAGG--AC--TTTCAGTAACT-TTT-TAT--A-A---A-TG--CA--TATATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGT-
i Aotus_azarae.k141_3170768                             I 9 I 1
s Aotus_griseimembra.k141_3275623                            2899 206 +     22701 A--AA--AT-TCTCTTT--GAA-G-GA-T-CACAGTGGTTAAATTT--AA-AAGATT--GATTGT-TTCACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TAT--A-A---A-TG--CA--TATATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCATGCAGAATTT--TAAGT-
i Aotus_griseimembra.k141_3275623                       C 0 I 1
s Aotus_nancymaae.KZ196176.1                              5746857 206 +   9889416 a--aa--at-tctctTT--GAA-G-GA-T-CACAGTggttaaattt--aa-aagatt--gattGT-TTCACCTCAGGAAG--AC--TTTCAGTAAct-ttt-tat--a-a---a-tg--ca--tatatttaatggAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTctacata-t-t-t---ttt-caat---aaa---a-ctgtTCGTGCAGAATTT--TAAGT-
i Aotus_nancymaae.KZ196176.1                            C 0 I 1
s Aotus_trivirgatus.k141_1740727                             3442 206 -    104377 A--AA--AT-TCTCTTT--GAA-G-GA-T-CACAGTGGTTAAATTT--AA-AAGATT--GATTGT-TTCACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TAT--A-A---A-TG--TA--TATATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTTGTGCAGAATTT--TAAGT-
i Aotus_trivirgatus.k141_1740727                        C 0 I 1
s Aotus_vociferans.k141_718647                               3448 206 +     23246 A--AA--AT-TCTCTTT--GAA-G-GA-T-CACAGTGGTTAAATTT--AA-AAGATT--GATTGT-TTCACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TAT--A-A---A-TG--TA--TATATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTTGTGCAGAATTT--TAAGT-
i Aotus_vociferans.k141_718647                          C 0 I 1
s Aplodontia_rufa.AprRuf_scaffold_156013                     1458 213 +      5067 AAACA--AT-CCCTTTC--AGG-GGAA-G-AACAGTAGCGAAATTT--CT-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TAG-GATA-A-A---A-TG--TATATACATTTAATGGAAGGC-ATGCTATGC-TTCT-TGTAAGAATT-TGTTCCAAATCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCATGCAGAATGT--TAAATA
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      15410 208 +     17483 A--CA--AT-CACCTTT--GGG-G-TA-T-CACAGGGATTAAGTTT--CA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCGGTAACT-TTG-CACA-A-A---A-TG--TG--TATATTTAATGGAAGGC-ATGCTATGC-TGCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCGTACAGAATCT--TAAGTA
i Arctocebus_calabarensis.k141_1161114                  I 2 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 6713 208 -     29036 A--AA--AT-TACTTTG--G-GGA-GA-C-TGGAGTGCCTAAATTT--CT-AAAATT--TATTGT-TCAACCTCAGAAGG--AC--TTTCAGTTTCT-TTG-TATA-A-A---A-TG--TA--TACATTTCATGGAAAGC-ATGCTATGC-TTTT-TACAAGAATT-TCTTTTAAGTCTTTGTGTATAATTAATGGCTTGCCTACATA-T-T-T---TTT-CAAC---AAA---A-CTATTCATGCAGAATTT--TAAGTA
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9536710 206 +  39197703 A--AA--AT-TCTCTTT--GAG-A-GA-G-CACAGTGGTTAAGTTT--AA-AAGATT--GATTGT-TTCACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TAT--A-A---A-TG--TA--TACATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGT-
i Ateles_geoffroyi_b.tarseq_2582                           C 0 I 1
s Ateles_belzebuth.k141_1348307                             57994 206 +     85812 A--AA--AT-TCTCTTT--GAG-G-GA-G-CACAGTGGTTAAGTTT--AA-AAGATT--GATTGT-TTCACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TAT--A-A---A-TG--TA--TACATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGT-
i Ateles_belzebuth.k141_1348307                         C 0 I 1
s Ateles_chamek.k141_1072810                                 8993 206 +     89302 A--AA--AT-TCTCTTT--GAG-G-GA-G-CACAGTGGTTAAGTTT--AA-AAGATT--GATTGT-TTCACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TAT--A-A---A-TG--TA--TACATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGT-
i Ateles_chamek.k141_1072810                            C 0 I 1
s Ateles_geoffroyi_a.k141_1300742                             13498 206 -     58268 A--AA--AT-TCTCTTT--GAG-A-GA-G-CACAGTGGTTAAGTTT--AA-AAGATT--GATTGT-TTCACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TAT--A-A---A-TG--TA--TACATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGT-
i Ateles_geoffroyi_a.k141_1300742                         C 0 I 1
s Ateles_marginatus.k141_899112                             61489 206 +    119057 A--AA--AT-TCTCTTT--GAG-G-GA-G-CACAGTGGTTAAGTTT--AA-AAGATT--GATTGT-TTCACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TAT--A-A---A-TG--TA--TACATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGT-
i Ateles_marginatus.k141_899112                         C 0 I 1
s Ateles_paniscus.k141_1631200                               3440 206 -     25888 A--AA--AT-TATCTTT--GAG-G-GA-G-CACAGTGGTTAAGTTT--AA-AAGATT--GATTGT-TTCACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TAT--A-A---A-TG--TA--TACATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGT-
i Ateles_paniscus.k141_1631200                          C 0 I 1
s Avahi_laniger.k141_2840928                                 4191 208 -     16375 AA--A--AT-CACCTTT--GGG-G-GA-G-CACAGTGATTAAGTTT--CA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTG-TATA-A-A---A-TG--TG--TATATTTAATGGAAGGC-ATGTTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-TCATTCGTGCAGAATTT--TAAGTA
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                               511 208 +      2719 AA--A--AT-CACCTTT--GGG-G-GA-G-CACAGTGATTAAGTTT--CA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTG-TATA-A-A---A-TG--TG--TATATTTAATGGAAGGC-ATGTTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-TCATTCGTGCAGAATTT--TAAGTA
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26378161 208 +  51448160 a--aa--at-taccttt--gGG-G-GA-A-GAGAGTGGTTAAATTT--CT-AAGATT--TACTGT-TTAACCTCAAGAAG--AT--TTTCAGTAACt-ttg-tata-a-a---a-tg--ta--tatgtttaatGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCTTTGTGTATAATTAAAGGCTTGCctacata-t-t-t---ttt-caat---aaa---a-ctatCCATGCAGAATTT--TAAGTA
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        3392 208 -     13118 a--aa--at-taccttt--GGG-G-GA-A-GAGAGTGGTTAAATTT--CT-AAGATT--TACTGT-TTAACCTCAAGAAG--AT--TTTCAGTAACt-ttg-tata-a-a---a-tg--ta--tatgtttaatGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCTTTGTGTATAATTAAAGGCTTGCctacata-t-t-t---ttt-caat---aaa---a-ctaTCCATGCAGAATTT--TAAGTA
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   41239 208 -     72089 C--AA--AT-TACCTTT--GAG-G-GA-A-CAGAGTGATTAAATTT--CT-AAGATT--TATTGC-ATAATCTCAGGAAG--AC--TTTCAGTAACT-TTG-GAAA-A-A---A-TG--TA--TACATTTAATGGAAGGC-ATGCTATGT-TTCT-TATAAGAATT-TGTTCCAAGTCTTTGCATATAATTAATGGCTTGCCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATCCACACAGAATTT--TAAGTA
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6557250 208 +   6870073 C--AA--AT-TACCTTT--GGG-G-GA-A-CAGAGTGGTTAAATTT--CT-AAGATT--TATTGT-ATAATCTCAGGAAG--AC--TTTCAGTAACT-ttg-taaa-a-a---a-tg--ta--tacatttaatgGAAGGC-ATGCTATAT-TTCT-TATAAGAATT-TGTTCCAAGTCTTTGTGTATAATTAATGGCTTGTCtacata-t-t-t---ttt-caat---aaa---a-ctaTCCACAGAGAATTT--TAAGTA
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138137489 208 - 161108492 N--AA--AT-TACCTTT--GGG-G-GA-A-CAGAGTGGTTAAATTT--CT-AAGATT--TATTGT-ATAATCTCAGGAAG--AC--TTTCAGTAACT-TTG-TAAA-A-A---C-TG--TA--TACATTTAATGGAAGGC-ATGCTATAT-TTCT-TATAAGAATT-TGTTCCAAGTCTTTGTGTATAATTAATGGCTTGCCtacata-t-t-t---ttt-caat---aaa---a-ctaTCCACAGAGAATTT--TAAGTA
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     569863 208 -    998990 C--AA--AT-TACCTTT--GGG-G-GA-A-CAGAGTGGTTAAATTT--CT-AAGATT--TATTGT-ATAATCTCAGGAAG--AC--TTTCAGTAACT-TTG-TAAA-A-A---C-TG--TA--TACATTTAATGGAAGGC-ATGCTATAT-TTCT-TATAAGAATT-TGTTCCAAGTCTTTGTGTATAATTAATGGCTTGCCtacata-t-t-t---ttt-caat---aaa---a-ctaTCCACAGAGAATTT--TAAGTA
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136293222 208 - 158972876 C--AA--AT-TACCTTT--GGG-G-GA-A-CAGAGTGGTTAAATTT--CT-AAGATT--TATTGT-ATAATCTCAGGAAG--AC--TTTCAGTAACT-Ttg-taaa-a-a---a-tg--ta--tacatttaatgGAAGGC-ATGCTATAT-TTCT-TATAAGAATT-TGTTCCAAGTCTTTGTGTATAATTAATGGCTTGCCtacata-t-t-t---ttt-caat---aaa---a-ctaTCCACAGAGAATTT--TAAGTA
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1228978 208 -   1914593 C--AA--AT-TACCTTT--GGG-G-GA-A-CAGACTGGTTAAATTT--CT-AAGATT--TATTGT-ATAATCTCAGGAAG--AC--TTTCAGTAACT-TTg-taaa-a-a---a-tg--ta--tacatttaatgGAAGGC-ATGCGATAT-TTCT-TATAAGAATT-TGTTCCAAGTCTTTGTGTATAATTAATGGCTTGCCTACATA-T-G-T---TTT-CAAT---AAA---A-CTATCCACAGAGAATTT--TAAGTA
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               111333 207 -    171031 A--AA--AT-TATCTTT--GAG-G-GA-G-CACAGCAGTTAAATTT--AA-AAGATT--GATTGT-TTCACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---T-TG--TA--TACATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCATGCAGAATTT--TAAGT-
i Cacajao_ayresi.k141_724503                            C 0 I 1
s Cacajao_calvus.k141_96166                                 10359 207 +    125063 A--AA--AT-TATCTCT--GAG-G-GA-G-CACAGCAGTTAAATTT--AA-AAGATT--GATTGT-TTCACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---T-TG--TA--TACATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCATGCAGAATTT--TAAGT-
i Cacajao_calvus.k141_96166                             C 0 I 1
s Cacajao_hosomi.k141_303789                                12407 207 -    216513 A--AA--AT-TATCTTT--GAG-G-GA-G-CACAGCAGTTAAATTT--AA-AAGATT--GATTGT-TTCACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---T-TG--TA--TACATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCATGCAGAATTT--TAAGT-
i Cacajao_hosomi.k141_303789                            C 0 I 1
s Cacajao_melanocephalus.k141_1160263                        4947 207 -    134917 A--AA--AT-TATCTTT--GAG-G-GA-G-CACAGCAGTTAAATTT--AA-AAGATT--GATTGT-TTCACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---T-TG--TA--TACATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCATGCAGAATTT--TAAGT-
i Cacajao_melanocephalus.k141_1160263                   C 0 I 1
s Camelus_bactrianus.KN276303.1                           3217562 209 -   8989139 a--aa--aa-taccttt--ggg-G-GAAA-CAGAGTGGTTAAATTC--CT-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-ttg-aata-a-a---a-tg--ta--tacatttaatgGAAGGC-ATGCTATGC-TTCT-TACAAGAATT-TGTTCCAAGTCTTTGTGTATAATTAATGGCTTGCctacata-t-t-t---ttt-caat---aaa---a-ctatCCATGCAGAATTT--TAAGTA
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           395266 209 -  15254737 a--aa--at-taccttt--ggG-G-GAAA-CAGAGTGGTTAAATTC--CT-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-ttg-aata-a-a---a-tg--ta--tacatttaatgGAAGGC-ATGCTATGC-TTCT-TACAAGAATT-TGTTCCAAGTCTTTGTGTATAATTAATGGCTTGCctacata-t-t-t---ttt-caat---aaa---a-ctatCCATGCAGAATTT--TAAGTA
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2971000 209 +   6889770 a--aa--aa-taccttt--ggg-G-GAAA-CAGAGTGGTTAAATTC--CT-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-ttg-aata-a-a---a-tg--ta--tacatttaatgGAAGGC-ATGCTATGC-TTCT-TACAAGAATT-TGTTCCAAGTCTTTGTGTATAATTAATGGCTTGCctacata-t-t-t---ttt-caat---aaa---a-ctatCCATGCAGAATTT--TAAGTA
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11516079 208 +  39901454 A--AA--AT-TACCTTT--TGG-G-GA-G-CAGAGTGATTAAATTT--GC-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTG-TACA-A-A---A-TG--TG--TACATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCTTTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCATACAGAATGT--TAAGTA
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   11097 208 +     87036 A--AA--AT-TACCTTT--TGG-G-GA-G-CAGAGTGATTAAATTT--GC-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTG-TACA-A-A---A-TG--TG--TACATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCTTTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCATACAGAATGT--TAAGTA
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11262740 208 -  35597290 a--aa--at-taccttt--tgg-G-GA-G-CAGAGTGATTAAATTT--GC-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTG-TACA-A-A---A-TG--TG--TACATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCTTTGTGTATAATTAATGGCTTGTctacata-t-t-t---ttt-caat---aaa---a-ctattcATACAGAATGT--TAAGTA
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11085269 208 +  39895921 a--aa--at-taccttt--tgg-G-GA-G-CAGAGTGATTAAATTT--GC-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTG-TACA-A-A---A-TG--TG--TACATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCTTTGTGTATAATTAATGGCTTGTctacata-t-t-t---ttt-caat---aaa---a-ctattcATACAGAATGT--TAAGTA
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16452293 208 -  44759192 a--aa--at-taccttt--tgg-G-GA-G-CAGAGTGATTAAATTT--GC-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTG-TACA-A-A---A-TG--TG--TACATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCTTTGTGTATAATTAATGGCTTGTctacata-t-t-t---ttt-caat---aaa---a-ctattcATACAGAATGT--TAAGTA
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21323248 208 + 157394656 C--AA--AT-TACCTTT--GAG-G-GA-A-CAAAGTGATTAAATTT--CT-AAGATT--TATTGT-ATAATCTCAGGAAG--AC--TTTCAGTAACT-TTG-TAAA-A-A---A-TG--TG--TACATTTAATGGAAGGC-ATGCTATGT-TTCT-TATAAGAATT-TGTTCCAAGTCTTTGCATAGAATTAATGGCTTGCCtacata-t-t-t---ttt-caat---aaa---a-ctatCCACACAGAATTT--TAAGTA
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135704475 208 - 157403528 C--AA--AT-TACCTTT--GAG-G-GA-A-CAAAGTGATTAAATTT--CT-AAGATT--TATTGT-ATAATCTCAGGGAG--AC--TTTCAGTAACT-TTG-TAAA-A-A---A-TG--TG--TACATTTAATGGAAGGC-ATGCTATGT-TTCT-TATAAGAATT-TGTTCCAAGTCTTTGCATAGAATTAATGGCTTGCCtacata-t-t-t---ttt-caat---aaa---a-ctaTCCACACAGAATTT--TAAGTA
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_3326827                   27 208 +       288 A--AA--AT-TACCTTT--GGG-A-AA-A-TACAGTAGTTAAATTT--CT-AAAATT--TATTGC-TTAACCTCAGGAAG--AC--TTGCAGTAACT-TTA-TGTA-A-A---A-TG--TA--TACAGTTAAGGGAAGGC-ATGCTATGC-TTCT-AATATGAATT-TGTTCCAAGTCACTGTGTGTAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-ATGCTCATGCAGAATTT--CAAGTA
i Capromys_pilorides.CapPil_scaffold_3326827            N 0 N 0
s Carlito_syrichta.NW_007248099.1                          306564 208 +    345090 a--aa--at-tacgtCT--GAG-G-GA-G-CATAGTGGCTAAAttt--ca-aagatt--tatttt-ttaacctcaGGAAG--AC--TTTCAGCAACT-ttg-tata-a-a---a-tg--ta--tacatttaatgGAAGGC-TTGGCATGT-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCtacata-t-t-t---ttt-caat---aaa---a-ctATTCATGCAGAATTT--TAAGTA
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               57512 208 +     67245 A--AA--AT-TACTTTT--A-GGA-GA-G-CAGAGTGGCTAAATTT--CT-AAGATT--TATTGT-TTAACCTCAGAAGG--AC--TTCCAATTTCT-TTG-TATA-A-A---A-TG--TA--TACATTTAATGGAAAGC-ATGCTATGC-TTTT-TACAAGAATT-TCTTCCAAGTCTTTGTGTATAATTAATGGCTTGCCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCATGCAGAATTT--TAAGTA
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   28081 123 +     33760 -----------------------------------------------------------------------------------------------------------------A-TG--TG--TACATTTAATGGAAGGC-ATGCAATGC-CTTT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCATGCTGAATTT--TAAGTA
i Castor_canadensis.CasCan_scaffold_47037               I 84 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   156807 208 -    276539 A--AA--AT-TACCTTT--GGG-G-GA-A-CAGAGTGGTTAAATTT--CT-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTG-TATA-A-A---A-TG--TA--TACATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-CGTTCCAAGTCTTTGTGTATAATTAATGACTTGCCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATCCATGCAGAATTT--TAAGTA
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15784164 212 -  24422027 a--aa--at-tatcttt--ggG-A-GA-A-TACACTCGGTAAATTT--CT-AAGATT--TATTGT-TTAACCTCAGGAAG--AT--TTGCAGTaact-tta-tata-aaatgta-ta--ta--tacatttaatggAAGGC-ATGCTATGC-TTCT-TATCAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TNN-NNNN---NNN---N-NNNNNNNNNNNNNNNNN--NNNNNN
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15796096 212 -  24440124 a--aa--at-taccTTT--GGG-A-GA-A-TACAATCGGTAAATTT--CT-AAGATT--TATTGT-TTAACCTCAGGAAG--AT--TTGCAGTaact-tta-tata-aaatgta-ta--ta--tacatgtaatggAAGGC-ATGCTATGC-TTCT-TATCAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTacata-t-t-t---ttt-caat---aaa---a-atacgCATGCAGAATTT--TAAGTA
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       174287 212 +    436027 A--AA--AT-TACCTTT--GGG-A-GA-A-TACAATCGGTAAATTT--CT-AAGATT--TATTGT-TTAACCTCAGGAAG--AT--TTGCAGTAACT-TTA-TATA-AAATGTA-TA--TA--TACATGTAATGGAAGGC-ATGCTATGC-TTCT-TATCAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-ATACGCATGCAGAATTT--TAAGTA
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18888185 207 -  29618158 A--AA--CT-TCTCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATT--GATTGT-TTCACCTCAGGGAG--AC--TTTCAGTAACT-TTT-TAT-AA-A---A-TG--TA--TACATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTCTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGT-
i Cebus_albifrons.Contig22                              C 0 I 1
s Cebus_olivaceus.k141_93739                                 5729 207 -     26817 A--AA--CT-TCTCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATT--GATTGT-TTCACCTCAGGGAG--AC--TTTCAGTAACT-TTT-TAT-AA-A---A-TG--TA--TACATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTCTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGT-
i Cebus_olivaceus.k141_93739                            C 0 I 1
s Cebus_unicolor.k141_239009                                 9972 207 +     25043 A--AA--CT-TCTCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATT--GATTGT-TTCACCTCAGGGAG--AC--TTTCAGTAACT-TTT-TAT-AA-A---A-TG--TA--TACATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTCTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGT-
i Cebus_unicolor.k141_239009                            C 0 I 1
s Cephalopachus_bancanus.k141_702587                         5601 208 +     21754 A--AA--AT-TACGTTT--GAG-G-GA-G-CATAGTGGCTAAATTT--CA-AAGATT--TATTTT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTG-TATA-A-A---A-TG--TA--TACATTTAATGGAAGGC-TTGGCATGT-TTCT-TATAAGAATT-TGTTCCAAGTCACTTTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCATGCAGAATCT--TAAGTA
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4361290 205 +   7569818 -------at-taccttt--ggG-G-GA-G-CAGAGTGGTTAAATTT--CT-AAGATT--TATTAT-TTAAGCACAGGAAG--AC--TTTCAGTAACt-ttg-tata-a-a---a-tg--ta--tacatttaatgGAAAGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCTAAGTCTTTTTGTATAATTAATGGCTTGTctacata-t-t-t---ttt-caat---aaa---a-ctatTCATGCAGAATTT--TAAGTA
i Ceratotherium_simum.JH767818.1                        I 2 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         1045 205 -      9338 -------AT-TACCTTT--GGG-G-GA-G-CAGAGTGGTTAAATTT--CT-AAGATT--TATTAT-TTAAGCACAGGAAG--AC--TTTCAGTAACT-TTG-TATA-A-A---A-TG--TA--TACATTTAATGGAAAGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCTAAGTCTTTTTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCATGCAGAATTT--TAAGTA
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    I 2 C 0
s Cercocebus_atys.KQ010443.1                              6552108 208 +   6739814 a--aa--at-taccttT--GAG-G-AA-G-CACAGTggttaaattt--aa-aagatt--tattgt-TTAACCTCAGGAAG--AC--TTTCAGtaact-ttt-tata-a-a---a-tg--ta--tacatttaatggAAGAC-ATGCCATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTctacata-t-t-t---ttt-caat---aaa---a-ctgtTCGTGCAGAATTT--TAAGTA
i Cercocebus_atys.KQ010443.1                            C 0 I 1
s Cercocebus_chrysogaster.k141_2951608                      53585 208 -     54931 A--AA--AT-TACCTTT--GAG-G-AA-G-CACAGTGGTTAAATTT--AA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGAC-ATGCCATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGTA
i Cercocebus_chrysogaster.k141_2951608                  C 0 I 1
s Cercocebus_lunulatus.k141_3387186                         18569 208 -     19697 A--AA--AT-TACCTTT--GAG-G-AA-G-CACAGTGGTTAAATTT--AA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGAC-ATGCCATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGTA
i Cercocebus_lunulatus.k141_3387186                     C 0 I 1
s Cercocebus_torquatus.k141_3969582                         56100 208 -    107033 A--AA--AT-TACCTTT--GAA-G-AA-G-CACAGTGGTTAAATTT--AA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGAC-ATGCCATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGTA
i Cercocebus_torquatus.k141_3969582                     C 0 I 1
s Cercopithecus_ascanius.k141_3371259                        2545 207 -      3853 A--AA--AT-TACCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATGTAACGGAAGAC-ATGCCATGC-TTCT-TATAAGAATT-TGTTCCAAGTAACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGT-
i Cercopithecus_ascanius.k141_3371259                   C 0 I 1
s Cercopithecus_cephus.k141_598190                          26478 207 +     30494 A--AA--AT-TACCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATGTAATGGAAGAC-ATGCCATGC-TTCT-TATAAGAATT-TGTTCCAAGTAACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGT-
i Cercopithecus_cephus.k141_598190                      C 0 I 1
s Cercopithecus_diana.k141_1490386                           2502 207 -      4022 A--AA--AT-TACCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGAC-ATGCCATGC-TTTT-TATAAGAATT-TGTTCCAAGTAACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCGTGCAGAATTT--TAAGT-
i Cercopithecus_diana.k141_1490386                      C 0 I 1
s Cercopithecus_hamlyni.k141_381099                          2395 207 -      3505 A--AA--AT-TACCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TA--TA--TACATTTAATGGAAGAC-ATGCCATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGT-
i Cercopithecus_hamlyni.k141_381099                     C 0 I 122
s Cercopithecus_lowei.k141_623764                           21185 207 +     35983 A--AA--AT-TACCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGAC-ATGCCATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGT-
i Cercopithecus_lowei.k141_623764                       C 0 I 1
s Cercopithecus_albogularis.ctg51                              11987721 207 +  12117833 A--AA--AT-TACCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGAC-ATGCCATGC-TTCT-TATAAGAATT-TGTTCCAAGTAACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCATGCAGAATTT--TAAGT-
i Cercopithecus_albogularis.ctg51                             C 0 I 1
s Cercopithecus_mona.ctg12                               46474474 207 +  46592721 A--AA--AT-TACCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGAC-ATGCCATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGT-
i Cercopithecus_mona.ctg12                              C 0 I 1
s Cercopithecus_neglectus.k141_1474992                      32301 207 +     33420 A--AA--AT-TACCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGAC-ATGCCATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGT-
i Cercopithecus_neglectus.k141_1474992                  C 0 I 1
s Cercopithecus_nictitans.k141_675209                        2337 207 -      3443 A--AA--AT-TACCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGAC-ATGCCATGC-TTCT-TATAAGAATT-TGTTCCAAGTAACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGT-
i Cercopithecus_nictitans.k141_675209                   C 0 I 1
s Cercopithecus_petaurista.k141_2037881                      3328 207 -      4669 A--AA--AT-TACCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGAC-ATGCCATGC-TTCT-TATAAGAATT-TGTTCCAAGTAACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGT-
i Cercopithecus_petaurista.k141_2037881                 C 0 I 1
s Cercopithecus_pogonias.k141_1977419                        3123 207 -      4411 A--AA--AT-TACCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATT--TATTGT-TTAAGCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGAC-ATGCCATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGT-
i Cercopithecus_pogonias.k141_1977419                   C 0 I 1
s Cercopithecus_roloway.k141_3372345                         2653 207 -      4205 A--AA--AT-TACCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGAC-ATGCCATGC-TTCT-TATAAGAATT-TGTTCCAAGTAACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCGTGCAGAATTT--TAAGT-
i Cercopithecus_roloway.k141_3372345                    C 0 I 1
s Chaetophractus_vellerosus.ChaVel_scaffold_1070855           868 206 -      1715 A--CA--TT-TACCTTC--AGG-G-GA-G-CATAGTGGTTAAAGTT--CT-AAGATT--TATTAT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTG-TTGG-A-A---A-TG--TA--TGTACTTAATGGAAGGC-GTGCTATGC-TTCT-TATAAGAATT-TGTTCCCAGTCACTG--TATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCATGCAGAATTT--TAAGTA
i Chaetophractus_vellerosus.ChaVel_scaffold_1070855     I 1 C 0
s Cheirogaleus_major.k141_1157592                           56495 209 -     68416 AA-AA--AT-CACCTTT--GGG-G-GA-A-CACAGTGATTAAGTTT--CA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTG-TATA-A-A---A-TG--TG--TATATTTAATGGAAGGC-ATGCTATGC-TTCT-TACAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCGTGCAGAATTT--TAAGTA
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            5537 209 +     13308 AA-AA--AT-CACCTTT--AGG-G-GA-A-CACAGTGATTAAGTTT--CA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTG-TATA-A-A---A-TG--TG--TATATTTAATGGAAGGC-ATGCTATAC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCGTGCAGAATTT--TAAGTA
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             3003 206 -     18223 A--AA--AT-TCTCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATT--GATTGT-TTCACCTCAG-AAG--CC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTTGTGCAGAATTT--TAAGT-
i Cheracebus_lucifer.k141_619653                        C 0 I 44
s Cheracebus_lugens.k141_203936                             20026 206 +     25473 A--AA--AT-TCTCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATT--GATTGT-TTCACCTCAG-AAG--CC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTTGTGCAGAATTT--TAAGT-
i Cheracebus_lugens.k141_203936                         C 0 I 44
s Cheracebus_regulus.k141_2128895                           39065 206 +     57117 A--AA--AT-TCTCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATT--GATTGT-TTCACCTCAG-AAG--CC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTTGTGCAGAATTT--TAAGT-
i Cheracebus_regulus.k141_2128895                       C 0 I 44
s Cheracebus_torquatus.k141_315545                          43740 206 +     54541 A--AA--AT-TCTCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATT--GATTGT-TTCACCTCAG-AAG--CC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-C-T-T---TTT-CAAT---AAA---A-CTGTTTGTGCAGAATTT--TAAGT-
i Cheracebus_torquatus.k141_315545                      C 0 I 44
s Chinchilla_lanigera.JH721867.1                         15959334 208 +  43084221 a--aa--at-taccttt--ggG-A-GA-C-TACAGTAGTTAAATTT--CT-AAGATT--TATTGC-TTAACCTCAGGAAG--GC--TTGCTGtaact-tta-tata-a-a---a-tg--ta--tacatttaatggAAGGC-ATGCTATGC-TTCT-CATAAGAATT-TGTTCCAAGTCACTGTGCATAATTAATGGCTTGTCtacata-t-t-t---ttt-caat---aaa---a-gtaCTCATGTGGAATTT--TAAGTA
i Chinchilla_lanigera.JH721867.1                        I 1 C 0
s Chiropotes_israelita.k141_1189915                         68554 208 +    196370 A--AA--AT-TATCTTT--GAA-G-GA-G-CACAGCAGTTAAATTT--AA-AAGATT--GATTGT-TTCACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTTTGTATAATTAATGGCTTGTCTACATA-TTT-T---TTT-CAAT---AAA---A-CTGTTCATGCAGAATTT--TAAGT-
i Chiropotes_israelita.k141_1189915                     C 0 I 1
s Chiropotes_sagulatus.k141_773804                          12735 207 +     40510 A--AA--AT-TCTCTTT--GAA-G-GA-G-CACAGCAGTTAAATTT--AA-AAGATT--GATTGT-TTCACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTTTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCATGCAGAATTT--TAAGT-
i Chiropotes_sagulatus.k141_773804                      C 0 I 1
s Chlorocebus_aethiops.ctg22                             15135935 207 -  15256731 A--AA--AT-TACCTTT--GAG-G-GA-G-CACAGTAGTTAAATTT--AA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGAC-ATGCCATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCATGCAGAATTT--TAAGT-
i Chlorocebus_aethiops.ctg22                            C 0 I 1
s Chlorocebus_pygerythrus.k141_1486215                      30981 207 -     53260 A--AA--AT-TACCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGAC-ATGCCATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCATGCAGAATTT--TAAGT-
i Chlorocebus_pygerythrus.k141_1486215                  C 0 I 1
s Chlorocebus_sabaeus.CM001963.2                        101141430 207 + 101219884 a--aa--at-taccttT--GAG-G-GA-G-CACAGtggttaaattt--aa-aagatt--tattgt-TTAACCTCAGGAAG--AC--TTTCAGtaact-ttt-tata-a-a---a-tg--ta--tacatttaatggAAGAC-ATGCCATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTctacata-t-t-t---ttt-caat---aaa---a-ctgtTCATGCAGAATTT--TAAGT-
i Chlorocebus_sabaeus.CM001963.2                        C 0 I 1
s Choloepus_didactylus.ChoDid_scaffold_36182                14466 208 -     21363 A--AA--AT-TACCTTT--GGG-G-GA-G-CATAGCAGTTAAATTT--CT-AAGATT--TATTGT-TCAACCTCAGAAAG--AC--TTTCAGTAACT-TTG-TTTG-A-A---A-TG--TA--TGTATTTAATGGAAGGC-ATACTAAGC-TTCT-TATAAGAATT-TGTCCCCAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCATGCAGAATTT--TAAGTA
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           759777 208 +    964067 a--aa--at-taccttt--ggG-G-GA-G-CATAGCAGTTAAATTT--CT-AAGATT--TATTGT-TCAACCTCAGAAAG--AC--TTTCAGTaact-ttg-tttg-a-a---a-tg--ta--tgtaTTTAATGGAAGGC-ATACTAAGC-TTCT-TATAAGAATT-TGTCCCCAGTCACTGTGTATAATTAATGGCTTGTCTacata-t-t-t---ttt-caat---aaa---a-ctATTCATGCAGAATTT--TAAGTA
i Choloepus_hoffmanni.KN194586.1                        I 1 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_141308              6594 192 -     12508 -------------------------GA-G-CATAGTAGTTGAAATT--CT-AAAATC--TATTGT-TTAACCTCAAGAAG--AC--TTTCAGTAGCT-TTG-TTTA-A-A---A-TG--TA--TATATTTAATGGACTCC-GTGCTTTGA-TTTT-TACATGAATT-TGTTCTAAGACACTGT--ATAATTAATGGCTTTTCTACATA-T-T-T-TTTTC-CAAT---AAA---A-CTATTCATGCAGAATTT--TAAGTA
i Chrysochloris_asiatica.ChrAsi_scaffold_141308         I 17 C 0
s Colobus_angolensis.KN985967.1                          10880009 207 +  10971483 a--aa--at-taccttT--GAG-G-GA-G-CACAGtggttaaattt--aa-aagatt--tattgt-TTAACCTCAGGAAG--AC--TTTCAGtaact-ttt-tata-a-a---a-tg--ta--tacatttaatggAAGAC-ATGCCATGC-TTCT-TAAAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTctacata-t-t-t---ttt-caat---aaa---a-ctgtttGTGCAGAATTT--TAAGT-
i Colobus_angolensis.KN985967.1                         C 0 I 1
s Colobus_guereza.LG08                                  147661167 207 + 156195979 A--AA--AT-TACCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGAC-ATGCCATGC-TTCT-TAAAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTTGTGCAGAATTT--TAAGT-
i Colobus_guereza.LG08                                  C 0 I 1
s Colobus_polykomos.k141_1406057                            13154 207 +     23629 A--AA--AT-TACCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGAC-ATGCCATGC-TTCT-TAAAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGT-
i Colobus_polykomos.k141_1406057                        C 0 I 20
s Condylura_cristata.JH655880.1                          60610770 205 +  78930452 a--aa--at-taccttt--gac-T-GA-G-CAGAGTGGTTACATTT--CT---GATT--TATTGT-TTAAC-CCAGGAAG--AC--TTTCGGTAACT-TTG-TATA-C-A---A-CG--TA--TACATTTAATGGAAGGC-ATGCTATGc-ttct-tttaagaatt-tgttcCAAGTCTTTGTGTATAATTAATGGCTTGTctacata-t-t-t---ttt-caat---aaa---a-ctatcCATGCAGAATTT--TAAGTA
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         37226 207 -     40477 A--AA--AA-TTCTTTG--GGG-G-CA-G-CAGAGTAGTTAAATTT--CT-AA--AT--TATTGT-TTAACCTCAGGAAG--AC--TTCCAGTTACT-TTG-TATA-A-A---A-TG--TG--TACGTTTAATGGAAGGC-ATGCTATGC-TTCT-CATAAGAATT-TGTTCCAAGTCCTTGCATATAATTAATGGCTTGCCTACATA-T-T-T--TTTT-CAAT---ATA---G-CTATTCGTGTAGAATTT--TAAGTA
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 275048 207 -    399297 A--AA--AT-TACCTTT--GCA-G-G--G-CATAGTAGTTACATTT--CT-AAGATT--TATGGC-TTAACCTCTGGAAG--AC--TTTCAGTAACT-TAA-TATA-A-A---A-TG--TA--TACATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCGCAGTATATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-TTATTCCTGCTGAATTT--TAAGTA
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53026581 207 +  72327488 A--TA--AT-TACCTCT--GTG-G-G--G-CATAGCAGTTACATGT--CT-AAGATT--TATGGC-TTAACCTCAGAAAG--AC--TTTCAACAACT-TGg-tata-a-a---a-tg--ta--tacatttaatGGAAGGC-TCACTATGC-TTCT-TAGAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCtacata-t-t-t---ttt-caat---aaa---a-ctaTTCATTCTGAATGT--TAAGTA
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             17707 203 -     19186 A--CG--AT-TACCTTT----A-G-A--G-CTGAGTGGTTAGACTT--CT---GATT--TATTGC-TTAATCTCAGGAAG--AC--TTTTAGTGACT-TTG-TATA-A-A---A-TG--TA--TACATTTAATGAAAGTC-GTGCTATGC-TTCTTTACAAGAACT-TGTTCCAAGACTTTGTGTATAATTAATGACTTGTCTACATA-T-T-T----TT-CAAT---AAA---A-CCATTCATGCAGAATTT--TAAGTA
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            49387 208 -     70449 A--AA--AT-TACCTTT--TGG-G-GA-G-CAGAGTGATTAAATTT--CT-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTG-TATA-A-A---A-TG--TG--TACATTTAATGGAAGCC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCTTTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCATACAGAATGT--TAAGTA
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  205755 205 -    956709 A--AA--AA-TACCTCT--GGG-G-GA-G-CACTCCAGTTAAATTT--CT-AAGATT--TATTGT-TCAACCTCAGGAAG--AC--TTTCCGAAACT-TCG-TGTA-A-A---A-TG--TA--TATATTTAATGGAAAGC-ATACTCTGC-T----TGTAAGGATT-TGTTCCAACTCACTGTGTATAATTAATGACTTGTCTACATA-T-T-T---TTT-CAGT---AAA---A-CTACTCATGCGGAATTT--TAAGTA
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 28111 208 -     67205 A--AA--AT-CACCTTT--GGG-A-GA-A-TACAGCAGTTAAATTT--CT-AAGATT--TATTGC-TTAACCTCAGGAAG--AC--GTGCAGTAACT-TTA-TATA-A-A---A-TG--TA--TACAGTTAAGAGAAGGC-ATGCTACAC-TTCT-ACTAAGAATT-TGTTCCAAGTCACTTTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-ATGCTCATGCAGAATTT--TAAGTA
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                14941 207 +     26546 A--AA--AT-TACCTTT--GGG-A-GA-A-TACAGTAGGTAAAGTT--CT-AAGAAT--TATTGC-TTAACATCAGGAAG--AT--TTGCAGTAACT-TTA-TATA-A-A---A-TG--TA--CACATTTAATGGAAGGC-ATACTATGC-TTCT-TATAAGAATT-TGTTCCAAG-CACTGTGTATAATTAATGACTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-ATACGCATACAGAATTT--TAAGTA
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             56423 208 -    236241 G--AA--AT-TACCTTT--GGG-A-GA-A-TACAGTAGGTAAATTT--CT-AAGATT--TATTGC-TTAACCTCAGGAAG--AT--TTGCAGTAACT-TTA-TATA-A-A---A-TA--TA--TACATTTAGTGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTATGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-ATACTCATGCAGAATTT--TAAGTA
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          179678 206 -   6883506 a--aa--tt-taccttC--GGG-G-GA-G-CATAGTGGTTAAAGTT--CT-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTG-TTTG-G-A---A-TG--TA--TGTACTTAATGGAAAGC-GTGCTATGC-TTCT-TATAAGAATT-TGTTCCCAGTCACTG--TATAATTAATGGCTTGTCTacata-t-t-t---ttt-caat---aaa---a-ctATTCATGCAGAATGT--TAAGTA
i Dasypus_novemcinctus.JH568778.1                       I 1 C 0
s Daubentonia_madagascariensis.ctg11                     16842364 208 +  31942871 A--AA--AT-CACCTTT--GGG-G-GA-G-CACAGTGATTAAGTTT--CA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTG-TATA-A-A---A-TG--TG--TACATTTAATGGAAGAC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCGTGCAGAATTT--TAAGTA
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80034845 208 -  96802777 a--aa--tt-taccttt--ggG-G-GA-A-GAGAGCGGTTAAATTT--CT-AAGATT--TACTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACt-ttg-tata-a-a---a-tg--ta--tatgtttaatgGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCTTTGTGTATAATTAAAGGCTTGCctacata-t-t-t---ttt-caat---aaa---a-ctatCCATGCAGAATTT--TAAGTA
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18696822 208 -  18957592 a--aa--at-tactttt--g-ggA-GA-G-CAGAGTGGTTAAAGTT--CT-AAGATT--TATTGT-TTAATCTCAGAAGG--AC--TTTCAATTTCT-TTG-Tatg-a-a---a-tg--ta--tacatttaatgGAAAGC-ATGCTATGC-TTTT-TACAAGAATT-TCTTCCAAGTCTTTGTGTATAATTAATGGCTTGCCTACATA-C-T-T---TTT-CAAT---AAA---A-CTATTGATGCAGAATTT--TAAGTA
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 319949 205 +    993696 -------at-aaccttt--GGG-G-GA-G-CAGAGTGGTTAAATTT--CT-AAGATT--TATTAT-TTAAGCACAGGAAG--AC--TTTCAGTAACt-ttg-tata-a-a---a-tg--ta--tacatttaatgGAAAGC-ATGCTATGC-TTCT-TATAAGAATT-TTTTCCAAGTCTTTGTGTATAATTAATGGCTTGTCtacata-t-t-t---ttt-caat---aaa---a-ctaTTCATGCAGAATTT--TAAGTA
i Dicerorhinus_sumatrensis.PEKH010003161.1              I 2 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                    591 205 +    151128 -------AT-TACCTTT--GGG-G-GA-G-CAGAGTGGTTAAATTT--CT-AAGATT--TATTAT-TTAAGCACAGGAAG--AC--TTTCAGTAACT-TTG-TATA-A-A---A-TG--TA--TACATTTAATGGAAAGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCTAAGTCTTTTTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCATGCAGAATTT--TAAGTA
i Diceros_bicornis.DicBicMic_scaffold_9545              I 2 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   155218 209 +    228994 A--AA--AT-TACCTTT--GGG-A-GA-C-TCCAGTAGTTGAATTT--CT-AAGATT--TGTTGC-TTAGCCTCAGAAAG--GC--TTGCAGTAACT-GTA-TATA-A-A---A-TG--TA--TACATTTAATGAAAGGC-ATGCTATGC-TTCT-TATAAGAATTTTGTCCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-G-T-T---TTT-CAAT---AAA---A-ATATTCATGCAGAATTT--TAAGTA
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3652965 211 +   4240102 a--aa--at-tactttg--caG-G-GA-G-ctctgtagttc-attt--tc-aagatt--tatttt-ttagtcaTAGGAAG--AC--TTTCAGTAACT-Ttg-aata-a-a---a-tgcata--tatatttaatggACGGC-atacaatgc-ttttttttaagaatt-tgttcCAAGTCACTGTGTATAATTAATGGGTTGTCcacata-t-t-tt--ttt-caag---aaa---a-ctaTTCATACTGAATTT--CAAGTA
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 24524 209 +     28912 A--AA--AT-TACTTTG--CAG-G-GA-G-CTCTGTAGTTC-ATTT--TC-AAGATT--TATTTT-TTAGTCATAGGAAG--AC--TTTCAGTAACT-TTG-AATA-A-A---A-TTCATA--TATATTTAATGGACGTC-ATACAATGC-TTTT-TGTAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGGTTGTCCACATA-T-T-T---TTT-CAAG---GAA---A-CTATTCATACTGAATTT--TAAGTA
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                33684 208 -     73477 A--AT--AT-TACCTTT--GAG-A-GA-A-CACAGTAGGTAAATTT--CT-AAGATT--TATTAT-TTAACCTCAGGAAG--AT--TTGCAGTAACT-TTG-TATA-A-A---A-TG--TA--TACATTTAATGGAAGGC-GTGCTATGC-TTCT-TATCAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-ATACGCATGCAGAATTT--TAAGTA
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.AAIY02274224.1                            377 130 +      1655 -------------------------GG-G-CATCATGGTTGAAATT--CT-AAGATT--TATTGT-TTAACCTCAGAAAG--AC--TTTCAGTAACT-TTg-ttta-a-a---a-tg--ta--tacatttaatgGAAGGC-ATGCTAGGC-TTCT-TACAAGAATT-TGTTCCaacccccttt------------------------------------------------------------------------------
i Echinops_telfairi.AAIY02274224.1                      I 14 n 14
s Eidolon_helvum.KE772537.1                                 10193 207 +     24177 a--aa--at-tacttta--ggG-A-GA-G-CAGCGTGGTTAAAT-T--CT-AAGATT--TATTGT-ATAACCTCAGGAAG--AC--TTTCAGTTATT-TTG-TATG-A-A---A-TG--TG--TACATTTAATGAAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTTTTTGTGTATAATTAATGGCTTGCctacata-t-t-t---ttt-caat---aaa---a-ctattcATGCTGAATTT--TAAGTA
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1489506 208 +   1727528 C--AA--AT-TACCTTC--GGG-G-GA-A-CAGAGTGGTTAAATTT--CT-AAGATT--TATTGT-ATAATCTCAGGAAG--AC--TTTCAGTAACT-TTg-taaa-a-a---a-tg--ta--tacatttaatgGAAGGC-ATGCTATGT-TTCT-TATAAGAATT-TGTTCCAAGTCTTTGCATATAATTAATGGCTTGCCtacata-t-t-t---ttt-caat---aaa---a-ctaTCCACACAGAATTT--TAAGTA
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7804279 190 +  15467074 -------------------------GT-ATAATAATAGTTGAAATG--CT-AAGATT--TATTGT-TTGTCCTCAGGAAA--AC--TTTTAGCAGCT-TTG-TTTA-A-A---A-CG--TA--CACATTTAATGGAAGAC-AG-----GC-TTCT-TGTAAGAATT-TGTACCAAGTCACTGTGTATAATTAATGGCTTGTCtacata-t-t-ttt-tcc-caat---aaa---t-CTATTCATGCAGAATTT--TAAGTA
i Elephantulus_edwardii.JH947210.1                      I 14 C 0
s Ellobius_lutescens.LOEQ01003611.1                        237238 208 -    369425 A--TA--AT-TACCTCT--GTG-G-A--G-CACAGCAGTTACATTC--CT-AAGATT--TATGGC-TTAACCTCAGGAAG--AT--GTTCAGCAACT-TGG-TATA-A-A---A-TG--CA--TGCATTTAATGGAAGGC-ACACTATAC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTctacata-t-t-tt--ttt-caat---aaa---a-ctaTTCCTTCTGAATTT--TAAGTA
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           4251 208 -      7838 A--TA--AT-TACCTCT--GTG-G-A--G-CACAGCAGTTACATTC--CT-AAGATT--TATGGC-TTAACCTCAGGAAG--AT--GTTCAGCAACT-TGG-TATA-A-A---A-TG--CA--TGCATTTAATGGAAGGC-ACGCTGTAC-TTCT-TATAAGAATT-TGTTCCAAGTCACTCTGTATAATTAATAGCTTgtctacata-t-t-tt--ttt-caat---aaa---a-tgattccttctGAATTT--TAAGTA
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85869152 208 +  99434291 a--aa--at-taccttt--tgg-g-GA-G-CAGAGTGGTTAAATTT--CT-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCCgtaatt-ttg-tata-a-a---a-tg--tg--tacatttaaTGGAAGGC-ATACTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCTTTGTGTATAATTAATGGCTTGTCtacata-t-t-t---ttt-caat---aaa---a-ctatTCATACGGAATGT--TAAGTA
i Enhydra_lutris.KZ291749.1                             I 2 C 0
s Eptesicus_fuscus.JH977687.1                             4701782 207 +   6522550 a--aaaaat-tactttt--agg-a-GA-G-CAAGGTGGTTACATAT--CC-AAGATT--TATTGT-TTAACCTCAGAAAG--AC--TCT--GTTACT-ttg-tata-a-a---a-tg--ta--tacatttaatgGAAGGC-ATGCTATGC-TTCT-TATGAGAATT-TGTTCC-AGTCTTTGTGTATAATTAACGGCTTGCctacata-t-t-t---ttt-caat---aaa---a-ctattCATGCAGAATTT--CAAGTA
i Eptesicus_fuscus.JH977687.1                           I 1 C 0
s Equus_asinus.JREZ01000062.1                             5850686 202 -   7175178 a--aa--at-taccttt--tgg-G-GA-G-CAGAGT----AAATTT--CT-AAGATT--TATTGT-TTAACCACAGGAAG--AC--T--CAGTAACT-ttg-tata-a-a---a-tg--ta--tacatttaatgGAAAGT-GTCCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCTTTGTGTATAATTAATGGCTTGTctacata-t-t-t---ttt-caat---aaa---a-ctatTCATGCAGAATTT--TAAGTA
i Equus_asinus.JREZ01000062.1                           I 1 C 0
s Equus_caballus.CM000402.2                              13349188 202 +  41866177 a--aa--at-taccttt--tgg-G-GA-G-CAGAGC----AAATTT--CT-AAGATT--TATTGT-TTAACCACAGGAAG--AC--T--CAGTAACT-Ttg-tata-a-a---a-tg--ta--tacatttaatgGAAAGT-GTCCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCTTTGTGTATAATTAATGGCTTGTctacata-t-t-t---ttt-caat---aaa---a-ctatTCATGCAGAATTT--TAAGTA
i Equus_caballus.CM000402.2                             I 1 C 0
s Equus_przewalskii.ATBW01073585.1                          10678 202 +     92910 a--aa--at-taccttt--tgg-G-GA-G-CAGAGC----AAATTT--CT-AAGATT--TATTGT-TTAACCACAGGAAG--AC--T--CAGTAACT-ttg-tata-a-a---a-tg--ta--tacatttaatgGAAAGT-GTCCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCTTTGTGTATAATTAATGGCTTGTctacata-t-t-t---ttt-caat---aaa---a-ctgttcATGCAGAATTT--TAAGTA
i Equus_przewalskii.ATBW01073585.1                      I 1 C 0
s Erinaceus_europaeus.JH835290.1                         11530486 112 +  16010500 a--ag--aa-tgcCTTC--AGG-G-GA-A-TGGAGTGGTTAAATTT--CT---GATT--TATTGT-TTAACCTCAGGAGG--AC--TTTCAGTAACT-TTG-Tata-a-a---a-tg--ta--tacatttaatGGAAGAC-ATGCTCA-----------------------------------------------------------------------------------------------------------------
i Erinaceus_europaeus.JH835290.1                        I 1 I 79
s Erythrocebus_patas.Contig8                             48768113 207 -  48907691 A--AA--AT-TACCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGAC-ATGCCATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCATGCAGAATTT--TAAGT-
i Erythrocebus_patas.Contig8                            C 0 I 1
s Eschrichtius_robustus.EscRob_flattened_line_685          313047 208 +    330699 A--AA--AT-TGCCTTT--GTG-G-GA-A-GAGAGTGGTTAAATTT--CT-AAGATT--TACTGT-TTAACCTCAAGAAG--AC--TTTCAGTCACT-TTG-TATA-A-A---A-TG--TA--TATGTTTAATGGAAGGC-ATGCTATGC-TTCT-TACAAGAATT-TGTTCCAAGTCTTTGTGTATAATTAAAGGCTTGCCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATCCATGCAGAATTT--TAAGTA
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             59477 208 +     89355 A--AA--AT-TACCTTT--GGG-G-GA-A-GAGAGTGGTTAAATTT--CT-AAGATT--TACTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTG-TATA-A-A---A-TG--TA--TATGTTTAATGGAAGGC-ATGCTATGC-TTCG-TATAAGAATT-TGTTCCAAGTCTTTGTGTATAATTAAAGGCTTGCCTATATA-T-T-T---TTT-CAAT---AAA---A-CTATCCATGCAGAATTT--TAAGTA
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              2546 205 +     13586 -------AT-CACCTTT--GGG-G-GA-G-CACAGTGATTAAGTTT--CA-AAGATT--TATTGT-TTAACCTCAGGAAG--CC--TTTCAGTAACT-TTG-TATA-A-A---A-TG--TG--TATATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCGTGCAGAATTT--TAAGTA
i Eulemur_albifrons.k141_715837                         I 1 C 0
s Eulemur_collaris.k141_311830                               2481 205 -      6809 -------AT-CACCTTT--GGG-G-GA-G-CACAGTGATTAAGTTT--CA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTG-TATA-A-A---A-TG--TG--TATATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCGTGCAGAATTT--TAAGTA
i Eulemur_collaris.k141_311830                          I 2 C 0
s Eulemur_coronatus.k141_3240342                             8953 209 +     36558 AA-AA--AT-CACCTTT--GGG-G-GA-G-CACAGTGATTAAGTTT--CA-AAGATT--TATTGT-TTAACCTCAGGAAG--CC--TTTCAGTAACT-TTG-TATA-A-A---A-TG--TG--TATATTTAATGGAAGGC-ATGCTATAC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGTA
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             5271 205 +     60246 -------AT-CACCTTT--GGG-G-GA-G-CACAGTGATTAAGTTT--CA-AAGATT--TATTGT-TTAACCTCAGGAAG--CC--TTTCAGTAACT-TTG-TATA-A-A---A-TG--TG--TATATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCGTGCAGAATTT--TAAGTA
i Eulemur_flavifrons.k141_903901                        I 2 C 0
s Eulemur_fulvus.k141_653297                                 8754 205 +    109717 -------AT-CACCTTT--AGG-G-GA-G-CACAGTGATTAAGTTT--CA-AAGATT--TATTGT-TTAACCTCAGGAAG--CC--TTTCAGTAACT-TTG-TATA-A-A---A-TG--TG--TATATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCGTGCAGAATTT--TAAGTA
i Eulemur_fulvus.k141_653297                            I 2 C 0
s Eulemur_macaco.k141_1341545                               13133 205 +     16540 -------AT-CACCTTT--GGG-G-GA-G-CACAGTGATTAAGTTT--CA-AAGATT--TATTGT-TTAACCTCAGGAAG--CC--TTTCAGTAACT-TTG-TATA-A-A---A-TG--TG--TATATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCGTGCAGAATTT--TAAGTA
i Eulemur_macaco.k141_1341545                           I 2 C 0
s Eulemur_mongoz.k141_825972                                13409 205 +     27497 -------AT-CACCTTT--GGG-G-GA-G-CACAGTGATTAAGTTT--CA-AAGATT--TATTGT-TTAACCTCAGGAAG--CC--TTTCAGTAACT-TTG-TATA-A-A---A-TG--TG--TATATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCGTGCAGAATTT--TAAGTA
i Eulemur_mongoz.k141_825972                            I 2 C 0
s Eulemur_rubriventer.k141_411740                           15871 209 +     26808 AA-AA--AT-CACCTTT--GGG-G-GA-G-CACAGTGATTACGTTT--CA-AAGATT--TATTGT-TTAACCTCAGGAAG--CC--TTTCAGTAACG-TTG-TATA-A-A---A-TG--TG--TATATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCGTGCAGAATTT--TAAGTA
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                30599 205 +     46535 -------AT-CACCTTT--GGG-G-GA-G-CACAGTGATTAAGTTT--CA-AAGATT--TATTGT-TTAACCTCAGGAAG--CC--TTTCAGTAACT-TTG-TATA-A-A---A-TG--TG--TATATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCGTGCAGAATTT--TAAGTA
i Eulemur_rufus.k141_1620292                            I 2 C 0
s Eulemur_sanfordi.k141_186399                              13322 205 -     29447 -------AT-CACCTTT--GGG-G-GA-G-CACAGTGATTAAGTTT--CA-AAGATT--TATTGT-TTAACCTCAGGAAG--CC--TTTCAGTAACT-TTG-TATA-A-A---A-TG--TG--TATATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCGTGCAGAATTT--TAAGTA
i Eulemur_sanfordi.k141_186399                          I 2 C 0
s Felis_catus.CM001386.2                                129890352 207 - 159252932 a--aa--at-taccttt---gg-g-GA-G-CAGAGTGATTAAATTT--CT-GAGATT--TATTGT-TTAACCTCAGAAAG--AC--TTTCCGTAACT-TTG-TATA-A-A---A-TG--TG--TACAGTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCTTTGTGTATAATTAATGGCTTGTctacata-t-t-t---ttt-caat---aaa---a-ctatTCATACAGAATGT--TAAGTA
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129277427 207 - 158578461 a--aa--at-taccttt---gg-g-GA-G-CAGAGTGATTAAATTT--CT-GAGATT--TATTGT-TTAACCTCAGAAAG--AC--TTTCCGTAACT-TTG-TATA-A-A---A-TG--TG--TACAGTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCTTTGTGTATAATTAATGGCTTGtctacata-t-t-t---ttt-caat---aaa---a-ctatTCATACAGAATGT--TAAGTA
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 18562 207 +     52776 A--AA--AT-TACCTTT---GG-G-GA-G-CAGAGTGATTAAATTT--CT-GAGATT--TATTGT-TTAACCTCAGAAAG--AC--TTTCCGTAACT-TTG-TATA-A-A---A-TG--TG--TACAGTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCTTTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCATACAGAATGT--TAAGTA
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13890286 211 -  19261668 a--aa--at-ttccttt--gtg-a-GA-G-TACAGTAGTCAATTTT--AT-AAGATT--TATTGC-TTAACCTCAGGAAGTAACTTTCACAGTAACT-TTG-TATG-C-A---A-TG--TA--TACATTTAATGGAAGGC-A--CTGTGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTATATAATTAATGGCTTGTCTACATA-T-T-T--TTTT-CGCT---AAA---A-ATACTCATGCAGAATTT--TAAGTA
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     208462 208 -    847004 T--CA--AT-CCCCTTT--GGG-G-TA-G-CACAGGGATTAAGTTT--CA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTG-TACA-A-A---A-TG--TA--TATATTTAATGGAAGGC-ATGCTATGC-GTCT-CATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCGTACAGAATTT--TAAGCA
i Galago_moholi.ctg555                                  I 2 C 0
s Galago_senegalensis.k141_964197                           10843 208 -     43889 T--CA--AT-CCCCTTT--GGG-G-TA-G-CACAGGGATTAAGTTT--CA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTG-TACA-A-A---A-TG--TA--TATATTTAATGGAAGGC-ATGCTATGT-GTCT-CATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCGTACAGAATTT--TAAGCA
i Galago_senegalensis.k141_964197                       I 2 C 0
s Galagoides_demidoff.k141_1769638                           7907 208 +     27357 A--CA--AT-CCCCTTT--GGG-C-TA-G-CACAGGGATTAAGTCT--CA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTG-TACA-A-A---A-TG--TG--TATATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCGTACAGAATTT--TAAGCA
i Galagoides_demidoff.k141_1769638                      I 2 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               153822 207 +    324696 A--AA--AT-GACCTTT--GGG-G-GA-G-CACGGTGGTTAAATTT--CT-AAGATT--TATTGT-TTAACCTCATGAAG--GC--TTTTAGTATCT-TTA-CATA-A-A---A-TG--TA--TACATTTAATGGAAGGC-ATGCTTTTC-TTAT--ATAAGAATT-TGTTCTAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATCCATGCAGAATTT--TAAGTA
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    179023 206 -    189561 C--AA--AT-TACCTTT--GGG-G-GA-A-CAGAGTGGTTAAATTT--CT-AAGATT--TATTGT-ATAGTCTCAGGAAG--AC--TTTCAGTAACT---G-taca-a-a---a-tg--ta--tacatttaatgGAAGGC-ATGCTATGT-TTCT-TATAAGAATT-TGTTCCAAGTCTTTGCTTATAATTAATGGCTTGCCtacata-t-t-t---ttt-caat---aaa---a-caaTCCACACAGAATTT--TAAGCA
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           10228 208 -     18683 A--AA--AT-CACCTTT--GGG-G-AA-G-CACAGTAGTTAAATTT--CT-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTG-TATA-A-A---A-TG--TA--TACATTTAATGCCTGGC-AAGCTATGC-ATCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCATGTAGAATTT--TAAGTA
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               2701 207 -     14630 A--AA--AT-TACCTTT--GAG-G-GA-G-CACGGTGGTTAAATTT--AA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTACAGTAACT-TCT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGAC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCATGCAGAATTT--TAAGT-
i Gorilla_beringei.k141_111300                          C 0 I 743
s Gorilla_gorilla.LT578340.1                            119649800 207 - 195582420 a--aa--at-taccttT--GAG-G-GA-G-CACGGTggttaaattt--aa-aagatt--tattgt-TTAACCTCAGGAAG--AC--TTACAGTAACT-tct-tata-a-a---a-tg--ta--tacatttaatggAAGAC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTctacata-t-t-t---ttt-caat---aaa---a-ctgTTCATGCAGAATTT--TAAGT-
i Gorilla_gorilla.LT578340.1                            C 0 I 743
s Graphiurus_murinus.GraMur_scaffold_4493                   74757 208 +    118900 A--AA--AT-TACCTTT--GGG-G-AA-G-GACAGTAGTTAAATTT--CT-AAGATT--TATTGT-TTGACCTCAGGAAC--AC--TTTCAGTAACT-TTG-TATA-A-A---A-CA--TA--TACATTTAATGCCCAGC-ATGCTATGC-TTCT-TACAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCATGCAGAATTT--TAAGTA
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                         3102 209 +      3980 AA-AA--AT-CACCTTT--AGG-G-GA-G-CACAGTGATTAAGTTT--CA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTG-TATA-A-A---A-TG--TG--TATATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCGTGCAGAATTT--TAAGTA
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             25577 209 +     26611 AA-AA--AT-CACCTTT--AGG-G-GA-G-CACAGTGATTAAGTTT--CA-AAGATT--TATTGT-TTAACCTCGGGAAG--AC--TTTCAGTAACT-TTG-TATA-A-A---A-TG--TG--TATATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAACT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCGTGCAGAATTT--TAAGTA
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             3039 209 +     56096 AA-AA--AT-CACCTTT--AGG-G-GA-G-CACAGTGATTAAGTTT--CA-AAGATT--TATTGT-TTAACCTCGGGAAG--AC--TTTCAGTAACT-TTG-TATA-A-A---A-TG--TG--TATATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAACT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCGTGCAGAATTT--TAAGTA
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        26314 209 -     42470 AA-AA--AT-CACCTTT--AGG-G-GA-G-CACAGTGATTAAGTTT--CA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTG-TATA-A-A---A-TG--TG--TATATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCGTGCAGAATTT--TAAGTA
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        42908 209 -     54384 AA-AA--AT-CACCTTT--AGG-G-GA-G-CACAGTGATTAAGTTT--CA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTG-TATA-A-A---A-TG--TG--TATATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCGTGCAGAATTT--TAAGTA
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              14596 208 +     53719 A--AA--AT-TACCTTT--TGG-G-GA-G-CAGAGTGATTAAATTT--CT-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTG-TATA-A-A---A-TG--TG--TACATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCTTTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCATACAGAATGT--TAAGTA
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                25519 209 -     91191 C--AA--AT-TACCTTT--GAG-G-GA-A-CAGAGTGATTAAATTT--CT-AAGATT--TATTGT-ATAATCTCAGGAAG--AC--TTTCAGTAACT-TTG-TAAA-A-A---A-TG--TA--TACATTTAATGGAAGGC-ATGCTATGT-TTCT-TATAAGAATT-TGTTCCAAGTCTTTGCATATAATTAATGGCTTGCCTACATA-T-T-T--TTTT-CAAT---AAA---A-CTATCCACACAGAATTT--TAAGTA
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2548671 207 +  31725842 a--aa--at-taccttt--ggG-A-GA-G-TACAGTAGTTAAAATT--CT-AAGATT--TATTAC-TTAACCTCAGGAAG--AC--TCGAAGTAACT-TTG-tata-a-a---a-tg--tg--tacatttaatGGAAGGC-A--CTATGC-TTCT-TATACAAATT-TGTTCCAAGTCACTGTATATAATTAATGGCTTgtctacata-t-t-tt--ttt-caat---aaa---a-atactcATGCAGAATTT--TAAGTA
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               54071 211 +     73687 A--AA--AA-TACCTTC--TGT-G-CC-G-TGAAGAGGGTGAAATT--ATTAAGATT--TATTGT-TTAACCTCAGAAAG--AC--TTTCAGTAACT-TTG-TTTA-A-A---A-TG--TA--TGCATTTAATGGAGGGC-ATTCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T-TTTTT-CAAT---AAA---A-CTATTCACGCAGAATTT--TAAGTA
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              145085 208 +    277961 A--AA--AT-TACCTTT--GGG-G-GA-A-GAGAGTGGTTAAATTT--CT-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TGG-TATA-A-A---A-TG--TA--TACATTTAATGGAAGGC-ATGCCATGC-TTCT-TATGAGAATT-TGTTCCAAGTCTTTGTGTATAATTAATGGCTTGCCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATCCACGCAGAATTT--TAAGTA
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      276422 210 -    477199 a--aa--atctgctttc--ctG-G-GA-G-CAGAGTAGTTAAATTT--CT-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTTACt-ttg-tata-a-a---a-tg--ta--tacatttaatgGAAGGC-ACGCTATGC-TTCT-CATAAGAATT-TGTTCCAAGTCTTTGTGTATAATTAATGGCTTgcctacata-t-t-tt--ttt-caat---aaa---a-ctatTCATGCAGAATTT--TAAGTA
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              5581 209 -      9143 A--AA--AT-TACTTTC--CGG-G-GA-G-GAGAGTAGTTAAATTC--CT-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--GTTCAGTTACT-TTG-TATA-A-A---A-TG--TA--TACATTTAATGGAAGGC-ACGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCTTTGTGTATAATTAATGGCTTGCCTACATA-T-T-T--TTTT-CAAT---AAA---A-CTATTCATGCAGAATTT--TAAGTA
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg649                                    99381 208 +    115816 A--AA--AA-TACCTTT--GAG-G-TA-G-CACAGTGATTAAATTT--AA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGAC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGTA
i Hoolock_leuconedys.ctg649                                I 49 I 122
s Hyaena_hyaena.HyaHya_flattened_line_20729                 13650 208 -     67322 A--AA--AT-TACCTTT--TGG-G-GA-G-CAGAGTGATTAAATTT--CT-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTG-TATA-A-A---A-TG--TG--TACATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCTTTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCATACAGAATGT--TAAGTA
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16584 209 -    119109 A--AA--AT-TACCTTT--GGG-A-GA-A-CACAATAGGTAAATTT--CT-AAGATT--TATTGT-TTAACCTCAGGAAG--AT--TTGCAGTAGCT-TTA-TATA-AAA---A-TG--TA--TACATTTAATGGAAGGC-ATGCTACGC-TTCT-TATCAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-ATACGCATGCAGAATTT--TAAGTA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       I 1 C 0
s Hylobates_abbotti.k141_493872                              2519 208 +      5897 A--AA--AA-TACCTTT--GAG-G-TA-G-CACAGTGATTAAATTT--AA-AAGATT--TATTGT-TCAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGAC-ATGCTATAC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGTA
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_1485652                               945 202 -      1697 A--AA--AA-TACCTTT--GAG-G-TA-G-CACAGTGA------TT--AA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGAC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGTA
i Hylobates_agilis.k141_1485652                         I 82 C 0
s Hylobates_klossii.k141_466549                              8969 202 +     11537 A--AA--AA-TACCTTT--GAG-G-TA-G-CACAGTGA------TT--AA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGAC-ATGCTATTC-TTCT-TATAAAAATC-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGTAGAATTT--TAAGTA
i Hylobates_klossii.k141_466549                         I 3 C 0
s Hylobates_pileatus_b.ContigUN                                 14622064 208 -  25970782 A--AA--AA-TACCTTT--GAG-G-TA-G-CACAGTGATTAAATTT--AA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGAC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGTA
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1133650                            1953 208 -      2775 A--AA--AA-TACCTTT--GAG-G-TA-G-CACAGTGATTAAATTT--AA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGAC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGTA
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             30556 208 -     60944 A--AA--AA-TACCTTT--GAG-G-TA-G-CACAGTGATTAAATTT--AA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGAC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGTA
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     3720 208 +     22540 A--AA--AT-TACCTTT--GGG-A-GA-G-TACAGTAGTTAAATTT--CT-AAGATT--TATTGC-TTAACCTCAGGAAG--AC--TGGCAGTAACT-TTG-TATA-A-A---A-TG--TA--TACATTTAATGGAAGGC-ATGTTATGC-TTCT-TGTAAGAATT-TGTTCCAAGTCAGTGTGTATAACTAATGGCTTGTCTAGATA-T-T-T---TTT-CAAT---AAA---A-ATACTCATGCAGAATTT--TAAGTA
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7123585 209 +  13083262 A--CA--AT-TCCCTTT--GGG-GAAA-G-CACAGCAGTGAAATTT--CT-AAGATT--TATTGC-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTG-TATA-A-A---A-CG--TA--TACATTTAATGGAAGAC-ATGCTATGC-TTCT-TATAAGCACT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTctacata-t-t-t---ttt-caat---aaa---a-ctatTCATGCAGAATGT--TAAGTA
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_1884019                                    779 208 -      2196 AA--A--AT-CACCTTT--GGG-G-AA-G-CACAGTGATTAAGTTT--CA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCGGTAACT-TTG-TATA-A-A---A-TG--TG--TATATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTTGTGCAGAATTT--TAAGTA
i Indri_indri.k141_1884019                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               6834 208 +     17520 A--AA--AT-TACCTTT--GGG-G-GA-A-GAGAGCGGTTAAATTT--CT-AAGATT--TACTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTG-TATA-A-A---A-TG--TA--TATGTTTAATGGACGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCTTTGTGTATAATTAAAGGCTTGCCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATCCATGCAGAATTT--TAAGTA
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8563130 207 +  11848649 ---AA--AT-TACCTCT--GGT-G-TA-G-CACAGTAGTTAAATTT--CT-AAGATT--TATTGC-CTAACCTCAGGAAG--GC--TTTGAGTAACT-TTG-cata-a-a---a-tg--ta--tacatttaatGGAAAGC-ATGCTATGC-TGCT-TATAAGAATT-GGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTacata-t-t-t---ttt-caat---aaa---a-ctaTTCCTGCTGAATTT--TAAGCA
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               21665 208 +     37189 A--AA--AT-TACCTTT--GGG-G-GA-A-GAGAGCAGTTAAGTTT--CT-AAGATT--TACTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTG-TATA-A-A---A-TG--TA--TATGTTTAATGGAATGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCTTTGTGTATAATTAAAGGCTTGCCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATCCATGCAGAATTT--TAAGTA
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          47564 206 -    147782 A--AA--AT-TCTCTTT--GAG-G-GA-G-CACAGTGGTTAAGTTT--AA-AAGATT--GATTGT-TTCACCTCAGGAAG--AC--TTTCAGTAAGT-TTT-TAT--A-A---A-TG--TA--TACATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGT-
i Lagothrix_lagothricha.k141_12968                      C 0 I 1
s Lasiurus_borealis.LasBor_scaffold_5102                   111576 206 -    115756 A--AA--A--TACTTTT--AGG-A-GA-G-CAGGGTGGTTACATTT--CC-AAGATT--TATTGT-TTAACCTCAGAAAG--AT--TCTCAGTCACT-TTG-TATA-A-A---A-TG--TA--TATATTTAATGGAAGGC-ATGCTACGC-TTTT-TATGAGAATT-TGTTCCAAGTCTTTGTGTATAATTAATGGTTTGCATACATA-T-T-T---TT--TAAT---AAA---A-CTATTCATGCAGAATTT--CAAGTA
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258404597 209 - 285822530 AA-GA--AT-CACCTTT--AGG-G-GA-G-CACAGTGATTAAGTTT--CA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTG-TATA-A-A---A-TG--TG--TATATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCATGCAGAATTT--TAAGTA
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        21469 209 +     39228 AA-AA--AT-CACCTTT--GGG-G-GA-G-CACAGTGATTAAGTTT--CA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTG-TATA-A-A---A-TG--TG--TACATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCATGCAGAATTT--TAAGTA
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            50842 209 +     63517 AA-AA--AT-CACCTTT--GGG-G-GA-G-CACAGTGATTAAGTTT--CA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTG-TATA-A-A---A-TG--TG--TACATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCGTGCAGAATTT--TAAGTA
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        76084 209 +    116806 AA-AA--AT-CACCTTT--GGG-G-GA-G-CACAGTGATTAAGTTT--CA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTG-TATA-A-A---A-TG--TG--TACATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCGTGCAGAATTT--TAAGTA
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     29107 209 -     33031 AA-AA--AT-CACCTTT--GGG-G-GA-G-CACAGTGATTAAGTTT--CA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTG-TATA-A-A---A-TG--TG--TACATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCGTGCAGAATTT--TAAGTA
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3083365 207 -   3498232 a--aa--a--taccttt--tgg-g-GA-A-CAGAGTGATTAAATTT--GT-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TCG-TATA-A-A---A-TG--TG--TACATTTAATGGAAGCC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCTTTGTGTATAATTAATGGCTTGTctacata-t-t-t---ttt-caat---aaa---a-ctatTCATACAGAATGT--TAAGTA
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    10577 205 +     22452 ---AA--AT-TACCTTT--GGG-G-GA-A-CCTACT-GGGAAATTT--GT-AAGATT--TATTGT-TTAACCTCTGGAAG--AC--TTTCAGGAACT-TTG-TATA-A-A---A-TG--TA--TACATTTAATGGAAAGC-ATGGTATGC-TTCT-TACAAGAA-T-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATCCTTGCAGAATTT--TAAGTA
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            133992 208 +   3060487 a--aa--at-taccttt--ggg-G-GA-A-GAGAGTGGTTAAATTT--CT-AAGATT--TACTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTG-TATG-A-A---A-TG--TA--TATGTTTAATGGAAGGC-ATGCTATGT-TTCT-TATAAGAATT-TGTTCCAAGTCTTTGTGTATAATTAAAGGCTTGCctacata-t-t-t---ttt-caat---aaa---a-ctaTCCATGCAGAATTT--TAAGTA
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19245196 208 +  19376315 A--AA--AT-TACCTTT--GAG-G-AA-G-CACAGTGGTTAAATTT--AA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGAC-ATGCCATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGTA
i Lophocebus_aterrimus.ctg55                            C 0 I 1
s Loris_lydekkerianus.k141_550999                            8210 208 +     84689 A--CA--AT-CACCTTT--GGG-G-TA-A-TACGGGGATTAAGTTT--CA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--ATTCAGTAACT-TTG-TACA-G-A---A-TG--TG--TATATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TCTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCGTACAGAATTT--TAAGTA
i Loris_lydekkerianus.k141_550999                       I 2 C 0
s Loris_tardigradus.ctg97                                 3775961 208 +   6799190 A--CA--AT-GACCTTT--GGG-G-TA-A-TACGGGGATTAAGTTT--CA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--ATTCAGTAACT-TTG-TACA-G-A---A-TG--TG--TATATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TCTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCGTACAGAATTT--TAAGTA
i Loris_tardigradus.ctg97                               I 2 C 0
s Loxodonta_africana.GL010040.1                          20588848 211 -  62548349 a--aa--at-taccttc--ag--G-GC-A-CGTAGTGGTTGAAATT--CTTAAGATT--TATTGT-TTAACCTTAGGGAG--AC--TTTCAGTAACT-TTG-TTta-a-a---a-tc--ta--tacatttaatggaaGGC-GTGCTATGC-TTCT-TGTAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTtgtctacata-t-t-ttttttt-caat---aaa---a-ctaTTCATGCAGAATTT--TAAGTA
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11084725 208 +  39895028 a--aa--at-taccttt--tgg-G-GA-G-CAGAGTGATTAAATTT--GC-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTG-TACA-A-A---A-TG--TG--TACATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCTTTGTGTATAATTAATGGCTTGTctacata-t-t-t---ttt-caat---aaa---a-ctattcATACAGAATGT--TAAGTA
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             16882 207 +     74745 A--AA--AT-TACCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGAC-ATGCCATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGT-
i Macaca_arctoides.k141_2201161                         C 0 I 1
s Macaca_assamensis.Contig65                             12703388 207 +  12821369 A--AA--AT-TACCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGAC-ATGCCATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGCGCAGAATTT--TAAGT-
i Macaca_assamensis.Contig65                            C 0 I 1
s Macaca_cyclopis.k119_1168412                               5484 207 +      6569 A--AA--AT-TACCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGAC-ATGCCATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGT-
i Macaca_cyclopis.k119_1168412                          C 0 I 1
s Macaca_fascicularis.k141_155037                           43786 207 +     63263 A--AA--AT-TACCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGAC-ATGCCATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGT-
i Macaca_fascicularis.k141_155037                       C 0 I 1
s Macaca_fuscata.k119_1068107                               12362 208 +     12679 A--AA--AT-TACCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGAC-ATGCCATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCATGCAGAATTT--TAAGTA
i Macaca_fuscata.k119_1068107                           C 0 T 1
s Macaca_leonina.k141_3421209                                1935 207 +      3017 A--AA--AT-TACCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGAC-ATGCCATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGT-
i Macaca_leonina.k141_3421209                           C 0 I 1
s Macaca_maura.k141_251854                                  43547 208 -     79256 A--AA--AT-TACCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGAC-ATGCCATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGTA
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196032465 207 + 196197964 A--AA--AT-TACCTTT--GAG-G-GA-G-CACAGTggttaaattt--aa-aagatt--tattgt-TTAACCTCAGGAAG--AC--TTTCAGtaact-ttt-tata-a-a---a-tg--ta--tacatttaatggAAGAC-ATGCCATAC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTctacata-t-t-t---ttt-caat---aaa---a-ctgtTCGTGCAGAATTT--TAAGT-
i Macaca_mulatta.NC_041755.1                            C 0 I 1
s Macaca_nemestrina.KQ004885.1                           11442571 207 +  11645122 A--AA--AT-TACCTTT--GAG-G-GA-G-CACAGtggttaaattt--aa-aagatt--tattgt-TTAACCTCAGGAAG--AC--TTTCAGtaact-ttt-tata-a-a---a-tg--ta--tacatttaatggAAGAC-ATGCCATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTctacata-t-t-t---ttt-caat---aaa---a-ctgtTCGTGCAGAATTT--TAAGT-
i Macaca_nemestrina.KQ004885.1                          C 0 I 1
s Macaca_nigra.k141_282495                                   2494 208 -     46448 A--AA--AT-TACCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGAC-ATGCCATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGTA
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                2325 207 -      3617 A--AA--AT-TACCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGAC-ATGCCATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGT-
i Macaca_radiata.k141_1580474                           C 0 I 1
s Macaca_siberu.k141_741907                                 12657 207 -     55006 A--AA--AT-TACCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGAC-ATGCCATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAGT---AAA---A-CTGTTCGTGCAGAATTT--TAAGT-
i Macaca_siberu.k141_741907                             C 0 I 1
s Macaca_silenus.Contig12                                43837694 207 +  43892939 A--AA--AT-TACCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGAC-ATGCCATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGT-
i Macaca_silenus.Contig12                               C 0 I 1
s Macaca_thibetana.k99_116940                                4916 207 -      5978 A--AA--AT-TACCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGAC-ATGCCATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGT-
i Macaca_thibetana.k99_116940                           C 0 I 1
s Macaca_tonkeana.k141_2870633                               2499 208 -     27140 A--AA--AT-TACCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGAC-ATGCCATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGTA
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                699610 208 +    802869 A--AA--AT-TACTTTA--GGG-A-GA-G-CAGAGTGGTTGAAT-T--CT-AAGATT--TATTGT-ATAACCTCAGGAAG--AC--TTTCAGTTATT-TTG-TATA-A-A---A-TG--TG--TACATTTAATGAAAGGC-ATGCTATGC-TTCT-TGAAAGAATT-TGTTCCAAGTTTTTGTGTATAATTAATGGCTTGCCTACATA-T-T-T--TTTT-CAAT---AAA---A-CTATTCATGCTGAATTT--TAAGTA
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43434356 208 -  43563597 A--AA--AT-TACCTTT--GAG-G-AA-G-CACAGTGGTTAAATTT--AA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGAC-ATGCCAGGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGTA
i Mandrillus_leucophaeus.scaffold125                    C 0 I 1
s Mandrillus_sphinx.Contig144                             4447182 208 -   4543643 A--AA--AT-TACCTTT--GAG-G-AA-G-CACAGTGGTTAAATTT--AA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGAC-ATGCCATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGTA
i Mandrillus_sphinx.Contig144                           C 0 I 1
s Manis_javanica.JSZB01003966.1                            144100 210 +    252755 G--AA--AT-TACCTTT--AGG-A-GA-G-CAGAGTGGTTATATTT--CT-AAGATT--TATTTT-CTAACCTCAGGAAG--AC--TTTCACTAacttttg-tata-a-a---a-ta--ta--tacatttaatggAAGGA-ATGCTATAC-TTCT-TATAAGAATT-TGTTCCAAGTCTGCGTGTATAATTAATGACTtgtctacata-t-t-tt--ttt-caat---aaa---a-ctatTCATGCAGAATTT--TAAGTA
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             34175 209 +     58827 G--AA--AT-TACCTTT--AGG-A-GA-G-CAGAGTGGTTACATTT--CT-AAGATT--TATTTT-CTAACCTCAGGAAG--AC--TTTCACTAact-ttg-tata-a-a---a-ta--ta--tacatttaatggaAGGA-ATGCTATAC-TTCT-TATGAGAATT-TGTTCCAAGTCTGCATGTATAATTAATGGCTTgtctacata-t-t-tt--ttt-caat---aaa---a-ctatTCATGCAGAATTT--TAAGTA
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36871425 209 +  64221397 A--CA--AT-TCCCTTT--GGG-GAAA-G-CACAGCAGTGAAATTT--CT-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTG-TATA-A-A---A-CG--TA--TACATTTAATGGAAGAC-ATGCTATGC-TTCT-TATAAGCACT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTctacata-t-t-t---ttt-caat---aaa---a-ctatTCATGCAGAATGT--TAAGTA
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       62264 209 -    234502 A--AA--AT-TACTTTT--GGG-G-AA-G-CATAGTAGTTAAATTC--CT-AAGATT--TATTGT-TTAACCTCAGGAGG--AC--TTTCAGTTACT-TTG-TATA-T-A---A-TG--TA--TACATTTCATGGAA-GC-ATGCTCTGC-TTCT-TATAAGAATT-TGTTCCAAGTCTTTGTGTGTAATTAATGGCTTGCCTACATA-T-T-T-TTTTT-CAAC---ACG---A-CTATCCTTGCAGAATTT--TAAGTA
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_1828            226642 208 -    226874 A--AA--AT-TACCTTT--TGG-G-GA-G-CAGAGTGATTAAATTT--CT-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTG-TATA-A-A---A-TG--TG--TACATTTAATGGGAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCTTTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCATACAGAATGT--TAAGTA
i Mellivora_capensis.MelCap_flattened_line_1828         I 1 N 0
s Meriones_unguiculatus.MerUng_scaffold_52233                9536 208 +     15977 A--AA--AT-TACCTCT--GTG-G-G--G-CACAGCAGTTACATTT--CT-AAGATT--TATGGC-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TGG-TATA-A-A---A-TG--TA--TACATTTAATGGAAGGC-ACGCTATCC-TTCT-TATAAGAATT-TGTTCCAAGTCACCATGTATAATTAATGGCTTGTCTACATA-T-T-T--TTTT-CAAT---AAA---A-CTATTCCTGCTGAATTT--TAAGTA
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1044322 206 -  26018355 A--TA--AT-TACCTCT--GTG-G-G--G-CATAGCAGTTACATTT--CT-AAGATT--TATGGC-TTAACCTCAGGAAG--AC--TTTCAGCAACT-TAg-tata-a-a---a-tg--ta--tacatttaatGGAAGGC-TTGCTATGC-TTCT-TCTAAGAATT-TGTTCCAAGTTATTGTGTATAATTAATGGCTTGTCtacata-t-t-t----tt-caat---aaa---a-ctgTTCCTTCTGAATGT--TAAGTA
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_183284                   1704 208 +      2166 A--AA--AT-TACCTTT--GGG-G-GA-A-GAGAGTGGTTAAATTT--CT-AAGATT--TACCGT-TTAAACTCAGGAAG--AC--TTTCAGTAACT-TTG-TATA-A-A---A-TG--TG--TATGTTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCTTTGTGTATAATTAAAGGCTTACCTACATA-T-T-T---TTT-AAAT---AAA---A-CTATCCATGCAGAATTT--TAAGTA
i Mesoplodon_bidens.MesBid_scaffold_183284              C 0 C 0
s Microcebus_murinus.CM007691.1                          16507717 209 +  47401472 a-aaa--at-caccttt--ggG-G-GA-G-CACAGTGATTAAGTTT--CA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-ttg-tata-a-a---a-tg--tg--tatatttaatgGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTGTAATTAATGGCTTGTctacata-t-t-t---ttt-caat---aaa---a-ctatTCGTGCAGAATTT--TAAGTA
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  29011 192 -     48017 -------------------------GG-A-CATCGTGGTTAAAATT--CT-AAGATT--TATTGC-TTAACCTCAGAAAG--AC--TTTCAGTAACT-TTG-TTTA-A-A---A-TG--TA--TACATTTAATGGAAGGC-GTGCTTGGC-TTCT-TTTAAGAATT-TGTTCCAAGACACTGT--ATAATTAATGGCTTGTCTTCATA-T-T-T-TTTTC-CAAC---AAA---A-CTATTCATGCAGCATTT--TAAGTA
i Microgale_talazaci.MicTal_scaffold_34660              I 25 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               20689 208 -     32043 A--AA--AT-TACTTTT--G-GGA-GA-G-CAAAGTATTTAAATTT--CT-AAGATT--TATTGT-TTAACCTCAGAAGG--AC--TTTCAGTTTCT-TTG-TATA-A-A---A-TG--TA--TACATTTAATGGAAAGC-ATGCTATGC-TTTT-TACAAGAATT-TCTTCCAAATCTTTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---ATA---A-CTATTCATGCAGAATTT--TAAGTA
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22817439 207 -  98408828 A--TA--AT-TACCTCT--GTG-G-A--G-CACAGCAGTTACATTC--CT-AAGATT--TATGGC-TTAACCTCAGGAAG--AT--GTTCAGCAACT-TGG-TATA-A-A---A-TG--CA--TACATTTAATGGAAGGC-ACGCTATAC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCtacata-t-t-t---ttt-caat---aaa---a-ctaCTCCTTCTGAATTT--TAAGCA
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8207450 208 +  10048721 a--aa--at-tactttt--ggg-A-GA-G-CAGAGTTGTTAAATTT--CC-AAGATT--TATTGT-TTAACCTCAGAAAG--AC--TTTCAGTTACT-TTg-tcta-a-a---a-tg--ta--tacatttaatgGGAGGC-ATGCTAGGC-TTCT-TACAAGAATT-TGTTCCAAGTCTTTGTGTATAATTAATGGCTTGCctacata-t-t-t---ttt-caat---aaa---a-ctattCATGCAGAATTT--CAAGTA
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            32121 208 +     45743 A--AA--AT-TACTTTT--GGG-A-GA-G-CAGAGTTGTTAAATTT--CC-AAGATT--TATTGT-TTAACCTCAGAAAG--AC--TTTCAGTTACT-TTG-TCTA-A-A---A-TG--TA--TACATTTAATGGGAGGC-ATGCTAGGC-TTCT-CACAAGAATT-TGTTCCAAGTCTTTGTGTATAATTAATGGCTTGCCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCATGCAGAATTT--CAAGTA
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        33015 207 +     34273 A--AA--AT-TACCGTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--CACATTTAATGGAAGAC-ATGCCATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGT-
i Miopithecus_ogouensis.k141_2666161                    C 0 I 1
s Mirounga_angustirostris.MirAng_flattened_line_8852         8669 208 -    104932 A--AA--AT-TACCTTT--TGG-G-GA-A-CAGAGTGATTAAATTT--GT-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTG-TATA-A-A---A-TG--TG--TACATTTAATGGAAGCC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCTTTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCATACAGAATGT--TAAGTA
i Mirounga_angustirostris.MirAng_flattened_line_8852    I 1 C 0
s Mirza_zaza.k141_226143                                     3122 209 +      8497 AA-AA--AT-CACCTTT--GGG-G-GA-G-CACAGTGATTAAGTTT--CA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTG-TATA-A-A---A-TG--TG--TATATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCGTGCAGAATTT--TAAGTA
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 144429 208 +    154973 A--AA--AT-TACCTTT--GGG-G-GA-A-GAGAGCGGTTAAATTT--CT-AAGATT--TACTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTG-TATA-A-A---A-TG--TA--TATGTTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCTTTGTGTATAATTAAAGGCTTGCCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATCCATGCAGAATTT--TAAGTA
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                159200 207 +    265003 ---AA--AT-TACTTTG--G-GGA-GA-G-CAGAGTGGTTAAATTT--CT-AAGATT--TATTGT-TTAACCTCAGAAAG--AC--ATCCAGTTACT-TTG-TATA-A-A---A-TG--TA--TACATTTAATGGAAGGC-ATGTTATGC-TTTT-TACAAGAATT-TGTTCCAAGCCTTTGTGTATAATTAATGGCTTGCCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCATGCAGAATTT--TAAGTA
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 2609 207 -      4346 C--AA--AT-TACCTTT--GG--G-GA-A-CAGAGTGGTTAAATTT--CT-AAGATT--TATTGT-ATAATCTCAGGAAA--AC--TTTCAGTAACT-TTG-TAAA-A-A---A-TG--TA--TATATTTAATGGAAGGC-ATGCTATGT-TTCT-TATAAGAATT-TGTTCCAAGTCTTTGCGTATAATTAATGGCTTGCCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATCCACACAGAATTT--TAAGTA
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  142291 208 -    168139 A--AA--AT-TACCTTT--TGG-G-GA-G-CAGAGTGATTAAATTT--CT-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTG-TATA-A-A---A-TG--TG--TACATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCTTTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCATACAGAATGT--TAAGTA
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          17092 208 -    100666 A--AA--AT-TACTTTT--GGG-A-GA-G-CAGGGTGGTTAGATTT--CT-AAGATT--TATTGT-TTAACCTCAGAAAG--AT--TTTCCATTACT-TTG-TATA-A-A---A-TG--TA--TGCATTTAATGGAAGGC-ATGTTATGC-TTCT-TATGAGAATT-TGTTCCAAGTCTTTGTGTATAATTAATAGCTTGCCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCATGCAGAATTT--CAAGTA
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70763952 206 +  92629107 A--AA--AT-TACCTCT--CTG-G-G--G-CATAGCAGTTACATTT--GT-AAGATT--TATGGC-TTAACCTCAGGAAG--AC--TTTCAGTAACT-Tgg-tata-a-a---a-tg--ta--tacatttaatgGAAGGC-ACACTATGC-TTCT-TATAAGAATC-TATTCCAAGTCACTGTGTATAATTAATGACTTGTCtacata-t-t-t----tt-caat---aaa---a-ctatTCATGCTGAATTT--TAAGTA
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75486988 207 +  98207768 A--AA--AT-TACCTCT--CTG-G-G--G-CCTAGCAGTTACATTT--GT-AAGATT--TATGGC-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TCg-tata-a-a---a-tg--ta--tacatttaatGGAAGGC-ACACGATGC-TTCT-TATAAGAATC-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCtacata-t-t-t----tt-caaaa--aaa---a-ctaTTCGTGCTGAATTT--TAAGTA
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67553160 206 +  89017189 a--aa--at-tacctcC--CTG-G-G--G-CATAGCAGTTACATTT--GT-AAGATT--TATGGC-TTAACCTCAGGAAG--AC--GTTCAGGAACT-Tgg-tata-a-a---a-tg--ta--tacatttaatgGAAGGC-ATACTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCtacata-t-t-t----tt-caat---aaa---a-ctaTTCATGCTGAATTT--TAAGTA
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74328167 209 +  97876770 a--aa--at-tacctcT--CTG-G-G--G-CCTAGCAGTTACATTT--GT-AAGATT--TATGGC-TTAACCTCAGGAAG--AC--TTTCAGTAACT-Tgg-tata-a-a---a-tg--ta--tacatttaatgGAAGGC-ACACAATGC-TTCT-TATAAGAATC-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTctacata-t-t-t----tt-caaaaaaaaa---a-ctattcatgCTGAATTT--TAAGTA
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              8720 198 +     98495 ---------------CT--AGG-G-AA-G-CACAGTAGTTAAATCT--CT-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTG-TATA-A-A---A-TG--TA--TACATTTAATGCCCGAC-ATGCTATGC-TTCT-TACAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCATGCAGAATTT--TAAGTA
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4421534 208 -  28371801 a--aa--at-taccttt--tgg-g-GA-G-CAGAGTGATTAAATTT--CG-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTG-TATA-A-A---A-TG--TG--TACATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCTTTGTGTATAATTAATGGCTTGTctacata-t-t-t---ttt-caat---aaa---a-ctatTCATACGGAATGT--TAAGTA
i Mustela_putorius.JH417978.1                           I 1 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     87663 207 -    117718 --------A-TACCTTT--GGG-A-AA-A-TACAGTAGTTAGATGT--CT-AAGATT--TATTGC-TTAACCTCACGAAG--AC--TTGCAGTAACT-TTA-TGTA-A-A---A-TG--TA--TGCAGTTAAGGGGAGGC-ACACTATGC-ATCT-AATAAGAATT-GGTTCCGAGTCACTATGTATAATTGATGGCTTGTCTACATG-T-T-T---TTT-CAAT---AAAAAAA-ACGCTCATGCAGAATTT--CAAGTA
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 35 C 0
s Myotis_brandtii.KE161952.1                               965412 208 +   8389877 a--aa--at-tactttt--ggg-A-GA-G-CAGGGTGGTTAGATTT--CC-AAGATT--TATTGT-TTAACCTCAGAAAG--AC--TTTCAGTTACA-TTG-tata-a-a---a-tg--ta--cacatttaaTGGAAGGC-ATGCTATGC-TTCT-TATGAGAATT-TGTTCCAAGTCTTTGTGTATAATTAACGGCTTGCctacata-t-t-t---ttt-caat---aaa---a-ctgttCATGCAGAATTT--CAAGTA
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5017103 208 +   6462685 a--aa--at-tactttt--ggg-A-GA-G-CAGGGTGGTGAGATTT--CC-AAGATT--TATTGT-TTAACCTCAGAAAG--AC--TTTCAGTTACA-ttg-tata-a-a---a-tg--ta--tacatttaatgGAAGGC-ATGCCATGC-TTCT-TATGAGAATT-TGTTCCAAGTCTTTGTGTATAATTAACAGCTTGCCTACATA-C-T-T---TTT-CAAT---AAA---A-CTGTTCATGCAGAATTT--CAAGTA
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3462999 208 -   3747815 A--AA--TT-TACTTTT--GGG-A-GA-G-CAGGGTAGTTAGATTT--CT-AAGATT--TATTGT-TTAACCTCAGAAAG--AC--TTTCAGTTACA-ttg-tata-a-a---a-tg--ta--tacatttaatgGAAGGC-ATGCTATGC-TTCT-TATGAGAATT-TGTTCCAAGTCTTTGTGTATAATTAACGGCTTGCctacata-t-t-t---ttt-caat---aaa---a-ctgtTCATGCAGAATTT--CAAGTA
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         8194 208 +     66751 A--AA--AT-TACTTTT--AGG-A-GA-G-CAGGGTGGTTAGATTT--CC-AAGATT--TATTGT-TTAACCTCAGAAAG--AC--TTTCAGTTACA-TTG-TATA-A-A---A-TG--TA--TACATTTAATGGAAGGC-ATGCCATGC-TTCT-TATGAGAATT-TGTTCCAAGTCTTTGTGTATAATTAACAGCTTGCCTACATA-G-T-T---TTT-CAAT---AAA---A-CTGTTCATGCAGAATTT--CAAGTA
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3068 208 -      8794 A--AA--AT-TATCTTT--GGG-G-AA-G-CAGAGCACTTAAATTT--CT-AAGATT--TATTGT-TGAACCTTAGGAAG--AC--TTTCAGTAACT-TTG-CTTG-A-A---A-TG--TA--TGTATTTGATGGAAGGC-ATACTATGC-TTCT-TGTAAGAATT-TGTTCCCAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---G-CTATTCATGCAGAATTT--TAAGTA
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            108045 209 +    362372 a--at--at-tacctTT--GTG-G-GA-G-CAGAGCAGTTAAATTT--CT-AAGATT--TATTGC-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TGGTTATA-A-A---A-TG--CA--TACATTTAATGGAAGGC-ATGCTTTGC-TCCT-TACAAGAATT-TgttccaactcactatgtataaTTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCCTGCTGAATTT--TAAGCA
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               5394 207 +     48152 A--AA--AT-TACCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAGGAC-ATGCCATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGT-
i Nasalis_larvatus.k141_153429                          C 0 I 1
s Neomonachus_schauinslandi.NINY01007774.1                4482268 208 -  14209539 a--aa--at-taccttt--tgg-G-GA-A-CAGAGTGATTAAATTT--GT-AAGATT--TATTGT-TTAACCTTAGGAAG--AC--TTTCAGTAACT-TCG-TATA-A-A---A-TG--TG--TACATTTAATGGAAGCC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCTTTGTGTATAATTAATGGCTTGTctacata-t-t-t---ttt-caat---aaa---a-ctatTCATACAGAATGT--TAAGTA
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3949041 208 -   4490290 a--aa--at-taccttt--ggg-G-GA-A-GAGAGCGGTTAAATTT--CT-AAGATT--TACTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACt-ttg-tata-a-a---a-tg--ta--tatgtttaatgGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCTTTGTGTATAATTAAAGGCTTGCctacata-t-t-t---ttt-caat---aaa---a-ctatCCATGCAGAATTT--TAAGTA
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  47317 207 +     94413 A--AA--AT-TACTTTT--G-G-A-GA-G-CAGAGTGGTTAAATTT--CT-AAGATT--TATTGT-TTAACCTCAGAAAG--AC--TTTCAGTTACT-TTG-TATA-A-A---A-TG--TA--TACATTTAATGGAAGGC-ATGCAATGC-TTTT-TACAAGAATT-TGTTCCAAGTCTTTGTGTATAATTAATGGTTTGCCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCATGCAGAATTT--TAAGTA
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1439838                            266 207 +      3718 A--AA--AT-TACCTTT--GAG-G-TA-G-CACAGTGATTAAATTT--AA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACTTTTAATGGAAGAC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-C-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGT-
i Nomascus_annamensis.k141_1439838                      I 3 I 737
s Nomascus_concolor.k141_49591                                489 207 +      2014 A--AA--AT-TACCTTT--GAG-G-TA-G-CACAGTGATTAAATTT--AA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACTTTTAATGGAAGAC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGT-
i Nomascus_concolor.k141_49591                          C 0 I 737
s Nomascus_gabriellae.k141_906566                            1817 208 -      2544 A--AA--AT-TACCTTT--GAG-G-TA-G-CACAGTGATTAAATTT--AA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACTTTTAATGGAAGAC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGTA
i Nomascus_gabriellae.k141_906566                       C 0 I 122
s Nomascus_siki_b.tarseq_80                             22293 207 -  18771707 A--AA--AT-TACCTTT--GAG-G-TA-G-CACAGTGATTAAATTT--AA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACTTTTAATGGAAGAC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGT-
i Nomascus_siki_b.tarseq_80                         C 0 I 773
s Nomascus_siki_a.k141_844529                                  1568 208 +      2124 A--AA--AT-TACCTTT--GAG-G-TA-G-CACAGTGATTAAATTT--AA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACTTTTAATGGAAGAC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGTA
i Nomascus_siki_a.k141_844529                             C 0 I 122
s Nyctereutes_procyonoides.CAJHUB010000786.1                27718 208 +   3668941 a--aa--at-taccttt--tgg-G-GA-G-CGGAGTGATTAAATTT--CC-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTG-TACA-A-A---A-TG--TG--TACATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCTTTGTGTATAATTAATGGCTTGTctacata-t-t-t---ttt-caat---aaa---a-ctattcATACAGAATGT--TAAGTA
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65564556 208 -  95554990 A--CA--AT-CGCCTTT--GGG-G-TA-G-CACAGGGATTAAGTTT--CA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--ATTCAGTAACT-TTG-TACA-G-A---A-TG--TG--TATATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCATACAGAATTT--TAAGTA
i Nycticebus_bengalensis.LG16                           I 2 C 0
s Nycticebus_coucang.k141_2051882                            1401 208 +      6470 A--CA--AT-CGCCTTT--GGG-G-TA-G-CACAGGGATTAAGTTT--CA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--ATTCAGTAACT-TTG-TACA-G-A---A-TG--TG--TATATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCGTACAGAATTT--TAAGTA
i Nycticebus_coucang.k141_2051882                       I 2 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65666926 208 +  89412551 A--CA--AT-CGCCTTT--GGG-G-TA-G-CACAGGGATTAAGTTT--CA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--ATTCAGTAACT-TTG-TACA-G-A---A-TG--TG--TATATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCGTACAGAATTT--TAAGTA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     I 2 C 0
s Ochotona_princeps.JH802095.1                            4993559 198 -  23139505 a--aa--at-tacctta--GGG-A-GA-A-CAGAGCCAGtaaattt--ct-aagatt--tattgt-TTAACCTCCAGAAG--AC--TTTCAGGAACT-Ttg-tata-a-a---a-tg--ta--tacatttaatgGAAGAC-ATGGTATTC-T-CC-TACAAGAGTT-TGTTCCAAG--------TATAATTAATAGCTTgtctacat--t-t-t---ttt-caat---aaa---a-ctacTCATGCAGAATGT--TAAGCA
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3683134 208 +  10294119 A--AA--AT-TACCTTT--GGG-A-GA-A-TACAGCAGTTAAATTT--CT-AAGATT--TATTGC-TTAACCTCAGGAAG--AC--TTGCAGTaact-tta-tgta-a-a---a-ta--ta--tacagtTAAGGGAAGGC-ATGCTATGC-TTCT-AATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTctacata-t-t-t---ttt-caat---aaa---a-atgctCATGCAGAATTT--TAAGTA
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             676925 207 -   3126709 a--aa--at-taccttt--tgg-g-GA-G-GAGAGTGATTAAATTT--CT-AAGATT--TATTGT-TTAACCTCGGGAAG--AC--TTTCAGTAACT-TTG-TATA-A-A---A-TG--TG--TACATTTAATGGAAGCC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCTTTGTGTATAATTAATGGCTTGTctacata-t-t-t----tt-caat---aaa---a-ctatTCATACAGAATGT--TAAGTA
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1077737 207 +   1425656 C--AA--AT-TACCTTC--CGG-G-GA-A-CAGAGTGGTTAAATTT--CT-AAGATT--TATTGT-ATAATCTCAGGAAG--AC--TTTCAGTAact-ttg-taaa-a-a---a-ta--ta--tacatttaatggAAGGC-ATGCTATGT-TTCT-TATAAGAATT-TGTTCCAAGTCTTTGCATATAATTAATGGCTTGCCtacata-t-t-t----tt-caat---aaa---a-ctatCCACACAGAATTT--TAAGTA
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         34893 206 +     78940 C--GA--AT-TACCTTT--GGG-G-GA-A-CAGAGTAGTTAAACTT--CT-AAGATT--TATTGT-ATAATCTCAGGAAG--AC--TTTCAGTAACt---g-taaa-a-a---a-tg--ta--tacatttaatgGAAGGC-ATGCTATGT-TTCT-TATAAGAATT-TGTTCCAAGTCTTTGCTTATAATTAATGGCTTGCCtacata-t-t-t---ttt-caat---aaa---a-ctaTCCACACAGAATTT--TAAGTA
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  122715 206 +    145789 A--TA--AT-TACCTCT--GTG-G-A--G-CACAGCAGTTACATTT--CT-AAGATT--TATGGC-TTAACCTCAGGAAG--AT--GTCCAGCATCT-TGG-TATA-A-A---A-TG--TA--TACATTTAATGGAAGGC-ACGCTATGC-TTCT-TACAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T----TT-CAAT---AAA---A-CTATTCCTTCTGAATTT--CAAGTA
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  34469 207 +     62360 A--TA--AT-TACCTCT--GTG-G-A--G-CATACCAGTTACATTT--CT-AAGATT--TATGAC-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TGG-TATA-A-A---A-TG--TA--TACATTTAATGGAAGGC-ACACTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCCTTCTGAATTT--TAAGTA
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7222725 208 -   7562323 a--aa--at-taccttt--ggg-G-GA-A-GAGAGTGGTTAAATTT--CT-AAGATT--TACTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACt-ttg-tata-a-a---a-tg--ta--tatgtttaatgGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCTTTGTGTATAATTAAAGGCTTGCctacata-t-t-t---ttt-caat---aaa---a-ctatCCATGCAGAATTT--TAAGTA
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              41121 194 -     66828 -------------------------GA-A-CATAGTGGATGAAATT--CT-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAATAACT-TTG-TTTA-A-A---A-TG--TA--TACATTTAACAGAAGGC-ATGCTATGC-TTCT-TAAAAGAATT-TGTTCCAAGTCACTGTATATAATTAATGGCTTGTCTACATA-T-T-T-TTTTT-CAAT---AAA---A-CTATTCACACAGAATTT--TAAGTA
i Orycteropus_afer.OryAfe_flattened_line_13509          I 14 C 0
s Oryctolagus_cuniculus.CM000803.1                      141873233 207 + 163896628 a--aa--at-taccttt--gGG-G-GA-G-CCTACT-GGGAAATTT--GT-AAGATT--TATTGT-TTAACCTCTGGAAG--AC--TTTCAGGAACT-Ttg-tata-a-a---a-tg--ta--tacatttaatgGAAAGC-ATGGTATGC-TTCT-TACAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCtacata-t-t-t---ttt-caat---aaa---a-ctaTCCTTGCAGAATTT--TAAGTA
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      305057 208 -    505867 a--aa--at-taccttt--tgg-G-GA-G-CAGAGTGATTAAATTT--CC-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTG-TACA-A-A---A-TG--TG--TACATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCTTTGTGTATAATTAATGGCTTGtctacata-t-t-t---ttt-caat---aaa---a-ctattCATACAGAATGT--TAAGTA
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       36550 208 +     38679 A--CA--AT-CCCCTTT--GGG-G-TA-G-CACAGGGATTAAGTTT--CA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCTGTAACT-TTG-TACA-A-A---A-TG--TA--TATATTTAATGGAAGGC-ATGCTATGC-GTCT-CATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCGCACAGAATTT--CAAGCA
i Otolemur_crassicaudatus.k141_321880                   I 2 C 0
s Otolemur_garnettii.GL873528.1                          18005992 208 -  38779656 A--CA--AT-CCCCTTT--GGG-G-TA-G-CACAGGGATTAAGTTT--CA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCTGTAACT-TTg-taca-a-a---a-tg--ta--tatatttaatggaAGGC-ATGCTATGC-GTCT-CATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTctacata-t-t-t---ttt-caat---aaa---a-ctatTCGTACAGAATTT--TAAGCA
i Otolemur_garnettii.GL873528.1                         I 2 C 0
s Ovis_aries.CM001582.2                                 134075312 209 - 275406953 C--AA--AT-TACCTTT--GAG-A-GA-A-CAGAGTGATTACATTT--CT-AAGATT--TATTGT-ATAATCTCAGGAAG--AC--TTTCAGTAACT-TTg-taaa-a-a---a-tg--ta--tacatttaatgGAAGGC-ATGCTATAT-TTCT-TATAAGAATT-TGTTCCAAGTCTTTGCATATAATTAATGGCTTGcctacata-t-t-tt--ttt-caat---aaa---a-ctatCCACACAGAATTT--TAAGTA
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      76526 209 +    140051 C--AA--AT-TACCTTT--GAG-G-GA-A-CAGAGTGATTACATTT--CT-AAGATT--TATTGT-ATAATCTCAGGAAG--AC--TTTCAGTAACT-TTG-TAAA-A-A---A-TG--TA--TACATTTAATGGAAGGC-ATGCTATGT-TTCT-TATAAGAATT-TGTTCCAAGTCTTTGCATATAATTAATGGCTTGCCTACATA-T-T-T--TTTT-CAAT---AAA---A-CTATCCACACAGAATTT--TAAGTA
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127572045 207 - 205426864 a--aa--at-taccttT--GAG-G-GA-G-CACAGTggttaaattt--aa-aagatt--tattgt-TTAACCTCAGGAAG--AC--TTTCAGTAACT-tct-tata-a-a---a-tg--ta--tacatttaatggAAGAC-ATGCTATGC-TTCT-TGTAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTctacata-t-t-t---ttt-caat---aaa---a-ctgtTCGTGCAGAATTT--TAAGT-
i Pan_paniscus.CM003386.1                               C 0 I 1
s Pan_troglodytes.CM009241.2                            120149198 207 - 196562556 a--aa--at-taccttT--GAG-G-GA-G-CACAGTggttaaattt--aa-aagatt--tattgt-TTAACCTCAGGAAG--AC--TTTCAGTAACT-tct-tata-a-a---a-tg--ta--tacatttaatggAAGAC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTctacata-t-t-t---ttt-caat---aaa---a-ctgtTCGTGCAGAATTT--TAAGT-
i Pan_troglodytes.CM009241.2                            C 0 I 1
s Panthera_onca.PanOnc_flattened_line_1615                  31752 208 +    295523 A--AA--AT-TACCTTT--TGG-G-GA-G-CAGAGTGATTAAATTT--CT-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTG-TATA-A-A---A-TG--TG--TACAGTTAATGGAAGGC-ATGCTATGC-TTCC-TATAAGAATT-TGTTCCAAGTCTTTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCATACAGAATGT--TAAGTA
i Panthera_onca.PanOnc_flattened_line_1615              I 1 C 0
s Panthera_pardus.KV860323.1                              3635485 208 +  18214204 a--aa--at-taccttt--tgg-G-GA-G-CAGAGTGATTAAATTT--CT-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTG-TATA-A-A---A-TG--TG--TACAGTTAATGGAAGGC-ATGCTATGC-TTCC-TATAAGAATT-TGTTCCAAGTCTTTGTGTATAATTAATGGCTTGTctacata-t-t-t---ttt-caat---aaa---a-ctattCATACAGAATGT--TAAGTA
i Panthera_pardus.KV860323.1                            I 133 C 0
s Panthera_tigris.KE721879.1                              5025133 208 -   6340057 a--aa--at-taccttt--tgg-G-GA-G-CAGAGTGATTAAATTT--CT-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTG-TATA-A-A---A-TG--TG--TACAGTTAATGGAAGGC-ATGCTATGC-TTCC-TATAAGAATT-TGTTCCAAGTCTTTGTGTATAATTAATGGCTTGTctacata-t-t-t---ttt-caat---aaa---a-ctatTCATACAGAATGT--TAAGTA
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1064173 209 -   1292953 C--AA--AT-TACCTTT--GGG-G-AA-A-CAGAGTGATTAAATTT--CT-AAGATT--TATTGT-ATAATCTCAGGAAG--AC--TTTCAGTAACT-TTG-TAAA-A-A---A-TG--TA--TGCATTTAATGGAAGGC-ATGCTATGT-TTCT-TATAAGAATT-TGTTCCAAGTCTTTGCATATAATTAACAGCTTGcctacata-t-t-tt--ttt-caat---aaa---a-ctatCCACACAGAATTT--TAAGTA
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188153140 208 - 188283584 a--aa--at-taccttT--GAG-G-AA-G-CACAGTggttaaattt--aa-aagatt--tattgt-ttaacctcaggaag--ac--tttcagtaact-ttt-tata-a-a---a-tg--ta--tacatttaatggAAGAC-ATGCCATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTctacata-t-t-t---ttt-caat---aaa---a-ctgTTCGTGCAGAATTT--TAAGTA
i Papio_anubis.CM001492.2                               C 0 I 1
s Papio_cynocephalus.k141_386926                            49352 208 +     76494 A--AA--AT-TACCTTT--GAG-G-AA-G-CACAGTGGTTAAATTT--AA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGAC-ATGCCATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGTA
i Papio_cynocephalus.k141_386926                        C 0 I 1
s Papio_hamadryas.Contig15                               47510537 208 +  47705337 A--AA--AT-TACCTTT--GAG-G-AA-G-CACAGTGGTTAAATTT--AA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGAC-ATGCCATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGTA
i Papio_hamadryas.Contig15                              C 0 I 1
s Papio_kindae.k141_5458022                                 64514 208 -    104429 A--AA--AT-TACCTTT--GAG-G-AA-G-CACAGTGGTTAAATTT--AA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGAC-ATGCCATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGTA
i Papio_kindae.k141_5458022                             C 0 I 1
s Papio_papio.k141_3561084                                  14305 208 -     29451 A--AA--AT-TACCTTT--GAG-G-AA-G-CACAGTGGTTAAATTT--AA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGAC-ATGCCATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGTA
i Papio_papio.k141_3561084                              C 0 I 1
s Papio_ursinus.k141_3762866                                34708 208 +     35859 A--AA--AT-TACCTTT--GAG-G-AA-G-CACAGTGGTTAAATTT--AA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGAC-ATGCCATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGTA
i Papio_ursinus.k141_3762866                            C 0 I 1
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113053 207 -    135482 A--AA--AT-TACCTTT--AAG-G-GA-G-CAGAGTGATTAAATTT--CT-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTG-TATA-A-A---A-TG--TG--TACATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCTTT-TGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCATACAGAATGT--TAAGTA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           2603 208 -     23713 A--CA--AT-CACCTTT--GGG-G-TA-G-CACAGGGATTAAGTTT--CA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTG-TACA-A-A---A-TG--TG--TATATTTAATGGAAGGC-ATGCTATGC-TGCT-TATAAGAATT-TGTTCCAAGTCACTGTGTGTAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCATACAGAATTT--TAAGTA
i Perodicticus_ibeanus.k141_117958                      I 2 C 0
s Perodicticus_potto.k141_713187                            21902 208 -     27972 A--CA--AT-CACCTTT--GGG-G-TA-G-CACAGGGATTAAGTTT--CA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTG-TACA-A-A---A-TG--TG--TATATTTGATGGAAGGC-ATGCTATGC-TGCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCGTACAGAATTT--TAAGTA
i Perodicticus_potto.k141_713187                        I 2 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      40521 208 -     45160 A--AA--AT-TACTTTC--CAG-G-GA-G-CTCTGTAATTC-ATTT--CC-AAGATT--TATTGT-TTAATCGTAGGAAG--AC--TTTCAGTAACT-TTG-TATA-A-A---A-TG--TA--TACATTTAATGGGTAGC-TTGCAATGCCTTTT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGGTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCGTGCTGAATTT--TAAGTA
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4947645 207 -   8017169 A--TA--AT-TACCTCT--GTG-G-A--G-CATAGCAGTTACATTT--CT-AAGATT--TATGAC-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TGg-tata-a-a---a-tg--ta--tacatttaatGGAAGGC-ACACTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCtacata-t-t-t---ttt-caat---aaa---a-ctaTTCCTTCTGAATTT--TAAGTA
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                     9835 205 -     36578 G--GG--AA-TGCTTTT--GGG-A-TA-G-TACAGTAGTTACATTC--CT-AAGATT--TATTGC-TTTACCTTTGGGAG--AC--TTACAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGTC-A--CCATGC-T-CT-TATAAGAATT-TGTTCCCAGTCACTGTATATAATTAATGGCCAGTCTACATA-T-T-T---TTT-CAAT---AAA---A-TTACTCATGCAGAATTT--TAAGTA
i Petromus_typicus.PetTyp_scaffold_33007                C 0 I 30
s Phocoena_phocoena.PhoPho_flattened_line_11948            119342 208 -    122454 A--AA--AT-TACCTTT--GGG-G-GA-A-GAGAGCGGTTAAATTT--CT-AAGATT--TACTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTG-TATA-A-A---A-TG--TA--TATGTTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCTTTGTGTATAATTAAAGGCTTGCCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATCCATGCAGAATTT--TAAGTA
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           2398 208 -      3310 A--AA--AT-TACCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGAC-ATGCCATGC-TTCT-TAAAAGAATT-TGTTCTAAGTCATTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCATGCAGAATTT--TAAGTA
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       22303 208 -     82327 A--AA--AT-TACCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGAC-ATGCCATGC-TTCT-TAAAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCATGCAGAATTT--TAAGTA
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           19050 208 +     19957 A--AA--AT-TACCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGAC-ATGCCATGC-TTCT-TAAAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCATGCAGAATTT--TAAGTA
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26737064 207 +  26888534 a--aa--at-taccttT--GAG-G-GA-G-CACAGTggttaaattt--aa-aagatt--tattgt-TTAACCTCAGGAAG--AC--TTTCAgtaact-ttt-tata-a-a---a-tg--ta--tacatttaatggAAGAC-ATGCCATGC-TTCT-TAAAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGtctacata-t-t-t---ttt-caat---aaa---a-ctgtTCATGCAGAATTT--TAAGT-
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 I 1
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            94862 208 +    112873 G--AAAAAT-TACTTTT--AGG-A-TA-G-CAGGCTGGTTACATTT--CC-AAGATT--TATTGT-TTAACCTCAGAAAG--AC--TCT--GTTACT-TTG-TATA-A-A---A-TA--TA--TACATTTAATGGAAGAC-ATGCTATGC-TTCT-TATGAGAATT-TGTTCCAAGTCTTTGTGTATAATTAACGGCTAGCCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCATGCAGAATTT--CAAGTA
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             41047 207 -     61926 A--AA--AT-TCTCTTT--GAG-G-GA-G-CACAGCAGTTAAATTT--AA-AAGATT--GATTGT-TTCACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-TTGTTCGTGCAGAATTT--TAAGT-
i Pithecia_albicans.k141_991845                         C 0 I 1
s Pithecia_chrysocephala.k141_159118                        22476 207 +     78826 A--AA--AT-TCTCTTT--GAG-G-GA-G-CACAGCAGTTAAATTT--AA-AAGATT--GATTGT-TTCACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-TTGTTCGTGCAGAATTT--TAAGT-
i Pithecia_chrysocephala.k141_159118                    C 0 I 1
s Pithecia_hirsuta.k141_1152968                              6427 207 -     15800 A--AA--AT-TCTCTTT--GAG-G-GA-G-CACAGCAGTTAAATTT--AA-AAGATT--GATTGT-TTCACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-TTGTTCGTGCAGAATTT--TAAGT-
i Pithecia_hirsuta.k141_1152968                         C 0 I 1
s Pithecia_mittermeieri.k141_2119203                         9625 207 -     16101 A--AA--AT-TCTCTTT--GAG-G-GA-G-CACAGCAGTTAAATTT--AA-AAGATT--GATTGT-TTCACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-TTGTTCGTGCAGAATTT--TAAGT-
i Pithecia_mittermeieri.k141_2119203                    C 0 I 1
s Pithecia_pissinattii.k141_1102319                          2934 207 +      9673 A--AA--AT-TCTCTTT--GAG-G-GA-G-CACAGCAGTTAAATTT--AA-AAGATT--GATTGT-TTCACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-TTGTTCGTGCAGAATTT--TAAGT-
i Pithecia_pissinattii.k141_1102319                     C 0 I 1
s Pithecia_pithecia.tarseq_313                           13471928 207 -  19735023 A--AA--AT-TCTCTTT--GAG-G-GA-G-CACAGCAGTTAAATTT--AA-AAGATT--GATTGT-TTCACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-TTGTTCGTGCAGAATTT--TAAGT-
i Pithecia_pithecia.tarseq_313                          C 0 I 1
s Pithecia_vanzolinii.k141_831006                           10836 207 -     31692 A--AA--AT-TCTCTTT--GAG-G-GA-G-CACAGCAGTTAAATTT--AA-AAGATT--GATTGT-TTCACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-TTGTTCGTGCAGAATTT--TAAGT-
i Pithecia_vanzolinii.k141_831006                       C 0 I 1
s Platanista_gangetica.PlaMin_flattened_line_72990           3410 208 +     21690 A--AA--AT-TACCTTT--GGG-G-GA-A-GAGAGTGGTTAAATTT--CT-AAGATT--TACTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTG-TATA-A-A---A-TG--TA--TCTGTTTAATGGAAGGC-ATGCTATGC-TTCC-TATAAGAATT-TGTTCCAAGTCTTTGTGTATAATTAAAGGCTTGCCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATCCATGCAGAATTT--TAAGTA
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       20268 206 +     44506 A--AA--AT-TCTCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATT--GATTGT-TTCACCTCAG-AAG--CC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTTGTGCAGAATTT--TAAGT-
i Plecturocebus_bernhardi.k141_959214                   C 0 I 44
s Plecturocebus_brunneus.k141_498086                        20478 206 +     67491 A--AA--AT-TCTCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATT--GATTGT-TTCACCTCAG-AAG--CC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTTGTGCAGAATTT--TAAGT-
i Plecturocebus_brunneus.k141_498086                    C 0 I 44
s Plecturocebus_caligatus.k141_2539816                      10719 206 -     98129 A--AA--AT-TCTCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATT--GATTGT-TTCACCTCAG-AAG--CC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTTGTGCAGAATTT--TAAGT-
i Plecturocebus_caligatus.k141_2539816                  C 0 I 44
s Plecturocebus_cinerascens.k141_744510                     20324 206 +    147771 A--AA--AT-TCTCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATT--GATTGT-TTCACCTCAG-AAG--CC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTTGTGCAGAATTT--TAAGT-
i Plecturocebus_cinerascens.k141_744510                 C 0 I 44
s Plecturocebus_cupreus.k141_1223294                        20574 206 -     23762 A--AA--AT-TCTCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATT--GATTGT-TTCACCTCAG-AAG--CC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTTGTGCAGAATTT--TAAGT-
i Plecturocebus_cupreus.k141_1223294                    C 0 I 44
s Plecturocebus_dubius.k141_3565563                          1040 206 -     55515 A--AA--AT-TCTCTTT--GAG-G-GA-G-CACAGTGATTAAATTT--AA-AAGATT--GATTGT-TTCACCTCAG-AAG--CC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTTGTGCAGAATTT--TAAGT-
i Plecturocebus_dubius.k141_3565563                     C 0 I 44
s Plecturocebus_grovesi.k141_242819                         20393 206 +    152463 A--AA--AT-TCTCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATT--GATTGT-TTCACCTCAG-AAG--CC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTTGTGCAGAATTT--TAAGT-
i Plecturocebus_grovesi.k141_242819                     C 0 I 44
s Plecturocebus_hoffmannsi.k141_1595076                      7153 206 +      8943 A--AA--AT-TCTCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATT--GATTGT-TTCACCTCAG-AAG--CC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTTGTGCAGAATTT--TAAGT-
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 I 44
s Plecturocebus_miltoni.k141_841561                         10113 206 +    134592 A--AA--AT-TCTCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATT--GATTGT-TTCACCTCAG-AAG--CC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGCC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTTGTGCAGAATTT--TAAGT-
i Plecturocebus_miltoni.k141_841561                     C 0 I 44
s Plecturocebus_moloch.k141_890597                          20703 206 -     75465 A--AA--AT-TCTCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATT--GATTGT-TTCACCTCAG-AAG--CC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTTGTGCAGAATTT--TAAGT-
i Plecturocebus_moloch.k141_890597                      C 0 I 44
s Pongo_abelii.NDHI03003816.1                              184590 207 -    373494 a--aa--at-taccttT--GAT-G-GA-G-CACAGTggttaaattt--aa-aagatt--tattgt-TTAACCTCAGGAAG--AC--TTTCAGtaact-ttt-tata-a-a---a-tg--ta--tacatttaatggAAGAC-ACGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGTTTGTctacata-t-t-t---ttt-caat---aaa---a-ctgTTCGTGCAGAATTT--TAAGT-
i Pongo_abelii.NDHI03003816.1                           C 0 I 1
s Pongo_pygmaeus.ctg62                                   19804497 207 +  19899266 A--AA--AT-TACCTTT--GAT-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGAC-ACGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGT-
i Pongo_pygmaeus.ctg62                                  C 0 I 2
s Presbytis_comata.k141_672698                               2632 207 -     15069 A--AA--AT-TACCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGAC-ACGCCATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGT-
i Presbytis_comata.k141_672698                          C 0 I 1
s Presbytis_mitrata.k141_860013                              2766 207 +     14865 A--AA--AT-TACCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGAC-ACGCCATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGT-
i Presbytis_mitrata.k141_860013                         C 0 I 1
s Procavia_capensis.ProCapCap_scaffold_15315                73935 211 +     78963 A--AA--AA-TACCTTC--TGT-G-CC-G-TGAAGAGGGTGAAATT--ATTAAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTG-TTTA-A-A---A-TG--TA--TGCATTTAATGGAGGGC-ATTCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T-TTTTT-CAAT---AAA---A-CTATTCATGCAGAATTT--TAAGTA
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6845973 209 +  12164890 a-aaa--at-caccttt--agG-G-GA-G-CACAGTGATTAAGTTT--CA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-ttg-tata-a-a---a-tg--tg--tatatttaatgGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGtctacata-t-t-t---ttt-caat---aaa---a-ctaTTCGTGCAGAATTT--TAAGTA
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    664590 209 -   2312742 N-NNN--NN-NNNNNNN--NNN-N-NN-N-NNNNNNNNNNNNNNNN--NN-NNNNNN--NNNNNN-NNNNNNNNNNNNNN--NN--NNNNNNNNNNN-NNN-NNNN-N-N---N-NN--NN--NNNNNNNNNNNNNNNNN-NNNNNNNNN-NNNN-NNNNNNNNNN-NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN-N-N-N---NNN-NNNN---NNN---N-NNNNNNNNNNNNNNNNN--NNNNNN
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         1118 208 +     11805 AA--A--AT-CACCTTT--GGG-G-GA-G-CACAGTGATTAAGTTT--CA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTG-TATA-A-A---A-TG--TG--TATATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCGTGCAGAATTT--TAAGTA
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           40452 208 +     52369 AA--A--AT-CACCTTT--GGG-G-GA-G-CACAGTGATTAAGTTT--CA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTG-TATA-A-A---A-TG--TG--TATATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCGTGCAGAATTT--TAAGTA
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         32841 208 -     44753 AA--A--AT-CACCTTT--GGG-G-GA-G-CACAGTGATTAAGTTT--CA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAATAACT-TTG-TATA-A-A---A-TG--TG--TATATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCGTGCAGAATTT--TAAGTA
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            14762 208 +     27322 AA--A--AT-CACCTTT--GGG-G-GA-G-CACAGTGATTAAGTTT--CA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAATAACT-TTG-TATA-A-A---A-TG--CG--TATATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCGTGCAGAATTT--TAAGTA
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       14401 208 -     53241 AA--A--AT-CACCTTT--GGG-G-GA-G-CACAGTGATTAAGTTT--CA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTG-TATA-A-A---A-TG--TG--TATATTTAATGGAAGGC-GTGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCGTGCAGAATTT--TAAGTA
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         36673 208 -     48185 AA--A--AT-CACCTTT--GGG-G-GA-G-CACAGTGATTAAGTTT--CA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTG-TATA-A-A---A-TG--TG--TATATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTGTAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCGTGCAGAATTT--TAAGTA
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           31076 207 +     77221 a--aa--at-tacctct--gtG-G-G--G-CATAGCAGTTACATTT--CT-AAGATT--TATGGC-TTAACCTCAGGAAG--AC--TTTCAGTAACT-Tgg-tata-a-a---a-tg--ta--tacatttaatGGAAGGC-ACGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACCATGTATAATTAATGGCTTGTCTacata-t-t-t---ttt-caat---aaa---a-ctaTTCCTTCTGAATTT--TAAGTA
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            1870 208 -     27784 a--aa--at-tactttt--a-gga-GA-G-GAGAGTGGTTAAATGC--CT-AAGATT--TATTGT-TTAACCTTAGAAAG--AC--TTTTAGTTACT-Ttg-tata-a-a---a-tg--ta--tacatttaatgGAAAAC-ATGCTATGC-TTTT-TACAAGAATT-TGTTCCAAGTCTTTGTGTATAATTAATGGCTTGCctacata-t-t-t---ttt-caat---aaa---a-ctattCATGCAGAATTT--TAAGTA
i Pteronotus_parnellii.KE867983.1                       I 2 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        243627 208 -    344369 A--AA--AT-TACCTTT--TGG-G-GA-G-CAGAGTGATTAAATTT--CT-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTG-TATA-A-A---A-TG--TG--TACATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCTTTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCATATGGAATGT--TAAGTA
i Pteronura_brasiliensis.PteBra_flattened_line_1343     I 1 C 0
s Pteropus_alecto.KB031157.1                             13243994 204 -  17261082 a--aa--at-tacttta--ggG-A-GA-G-CAGAG---TTAAAT-T--CT-AAGATT--TATTGT-ATAACCTCAGGAAG--AC--TTTCagttatt-ttg-tata-a-a---a-tg--tg--tacatttaatGAAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTTTTTGTGTATAATTAATGGCTTGGCTACata-c-t-t---ttt-caat---aaa---a-ctattcATGCTGAATTT--TAAGTA
i Pteropus_alecto.KB031157.1                            I 3 C 0
s Pteropus_vampyrus.KN525959.1                             601945 204 -   3946241 a--aa--at-tacttta--ggG-A-GA-G-CAGAG---TTAAAT-T--CT-AAGATT--TATTGT-ATAACCTCAGGAAG--AC--TTTcagttatt-ttg-tata-a-a---a-tg--tg--tacatttaatGAAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTTTTTGTGTATAATTAATGGCTTGGCTACAta-c-t-t---ttt-caat---aaa---a-ctattcATGCTGAATTT--TAAGTA
i Pteropus_vampyrus.KN525959.1                          I 1 C 0
s Puma_concolor.QAVW01000427.1                          131531715 208 - 161321710 a--aa--at-taccttt--tgg-G-GA-G-CAGAGTGATTAAATTT--CT-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCCGTAACT-TTG-TATA-A-A---A-TG--TG--TACAGTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCTTTGTGTATAATTAATGGCTTGtctacata-t-t-t---ttt-caat---aaa---a-ctattCATACAGAATGT--TAAGTA
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             26761 207 +     56732 A--AA--AT-TACCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAGGAC-ATGCCATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCATGCAGAATTT--TAAGT-
i Pygathrix_cinerea.k141_374971                         C 0 I 1
s Pygathrix_nigripes_b.ctg79                                 6803252 207 +   6970761 A--AA--AT-TACCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAGGAC-ACGCCATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCCTGCAGAATTT--TAAGT-
i Pygathrix_nigripes_b.ctg79                               C 0 I 1
s Pygathrix_nigripes_a.k141_101123                             2645 207 +     18040 A--AA--AT-TACCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAGGAC-ATGCCATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCCTGCAGAATTT--TAAGT-
i Pygathrix_nigripes_a.k141_101123                        C 0 I 1
s Rangifer_tarandus.RanTarSib_scaffold_24239                13815 207 +     68503 C--AA--AT-TACCTTC--GGG-G-GA-A-CAGAGTGGTTAAATTT--CT-AAGATT--TATTGT-ATAATCTCAGGAAG--AC--TTTCAGTAACT-TTG-TAAA-A-A---A-TG--TA--TACATTTAATGGAAGGC-ATGCTATGT-TTCT-TATAAGAATT-TGTTCCAAGTCTTTGCATATAATTAATGGCTTGCCTACATA-T-T-T----TT-CAAT---AAA---A-CTATCCACACAGAATTT--TAAGTA
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13913053 206 +  90463843 A--AA--AT-TACCTCT--CTG-G-G--G-CATAGCAGTTACATTT--GT-AAGATT--TATGGC-TTAACCTCAGGAAG--AC--TTTCAGTAACT-Tgg-tata-a-a---a-tg--ta--tacatttaatgGAAGGC-ACACTATGC-GTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCtacata-t-t-t----tt-caat---aaa---a-ctaTTCGTGCTGCATTT--TAAGTA
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1785809 210 +   2252614 a--aa--at-tactttc--agg-G-GA-G-CAGAGTAGTTAAATAT--CT-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTTACt-ttg-tata-a-a---a-tg--ta--tacatttaatgGAAAGC-ATGCTGTGC-TTCT-TATAAGAATT-TGTTCCAAGTCTTTGTGTATAATTAATGGCTtgcctacata-t-t-ttt-ttt-caat---aaa---a-ctatTCATGCAGAATTT--TAAGTA
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           13198 207 -     14454 A--AA--AT-TACCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAGGAC-ATGCCATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGT-
i Rhinopithecus_bieti.k119_102124                       C 0 I 1
s Rhinopithecus_roxellana.NC_044549.1                   206374524 207 - 206558726 a--aa--at-taccttT--GAG-G-GA-G-CACAGTggttaaattt--aa-aagatt--tattgt-TTAACCTCAGGAAG--AC--TTTCAGtaact-ttt-tata-a-a---a-tg--ta--tacatttaatggAGGAC-ATGCCATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTctacata-t-t-t---ttt-caat---aaa---a-ctgtTCGTGCAGAATTT--TAAGT-
i Rhinopithecus_roxellana.NC_044549.1                   C 0 I 1
s Rhinopithecus_strykeri.ctg4                            44852172 207 -  45163003 A--AA--AT-TACCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAGGAC-ATGCCATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGT-
i Rhinopithecus_strykeri.ctg4                           C 0 I 2518
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                17283 208 +    109198 A--AA--AT-TACTTTA--GGG-A-GA-G-CAGAGTGGTTAAAT-T--CT-AAGATT--TATTGT-ATAACCTTAGGAAG--AC--TTTAAGTTATT-TTG-TATA-A-A---A-CG--TG--TACATTTAATGAAAGGC-ATGCTATGC-TGCT-TATAAGAATT-TGTTCCAAGTTTTTGTGTATAATTAATGGCTTGCCTACATA-T-T-T--TTTT-CAAT---AAA---A-CTATTCATGCTGAATTT--TAAGTA
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       5621 208 +     12214 C--AG--AT-TACCTTT--GAG-G-GA-A-CAGAGTGATTAAATTT--CT-AAGATT--TATTGT-ATAATCTCAGGAAG--AC--TTTCAGTAACT-TTG-TGAA-A-A---A-TG--TA--TACATTTAATGGAAGGC-ATGCTATAT-TTCT-TATAAGAATT-TGTTCCAAGTCTTTGCATATAATTAATGGCTTGCCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATCCACACAGAATTT--TAAGTA
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 I 28
s Saimiri_boliviensis.NW_024100938.1                     15670161 208 -  43202129 a--aa--at-tctcttt--gag-G-GA-G-CACAGTggttaaattt--aa-aagatt--gattGT-TTCACCTCAGGGAG--AC--TTTCAgtaact-ttt-tat-aa-a---a-tg--ta--tatatttaatggaAGGC-ATGCTATAC-TTCT-TATAAGAATT-TGTTCCAAGTCACTCTGTATAATTAATGGCTTGTCtacata-t-t-t---ttt-caat---aaa---aactgTTCGTGTAGAATTT--TAAGT-
i Saimiri_boliviensis.NW_024100938.1                    C 0 I 1
s Saimiri_cassiquiarensis.k141_808270                        2028 207 +     34089 A--AA--AT-TCTCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATT--GATTGT-TTCACCTCAGGGAG--AC--TTTCAGTAACT-TTT-TAT-AA-A---A-TG--TA--TATATTTAATGGAAGCC-ATGCTATAC-TTCT-TATAAGAATT-TGTTCCAAGTCACTCTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGTAGAATTT--TAAGT-
i Saimiri_cassiquiarensis.k141_808270                   C 0 I 1
s Saimiri_macrodon.k141_2087127                              1969 207 -     60842 A--AA--AT-TCTCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATT--GATTGT-TTCACCTCAGGGAG--AC--TTTCAGTAACT-TTT-TAT-AA-A---A-TG--TA--TATATTTAATGGAAGCC-ATGCTATAC-TTCT-TATAAGAATT-TGTTCCAAGTCACTCTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGTAGAATTT--TAAGT-
i Saimiri_macrodon.k141_2087127                         C 0 I 1
s Saimiri_oerstedii.k141_841116                              2064 207 +     67014 A--AA--AT-TCTCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATT--GATTGT-TTCACCTCAGGGAG--AC--TTTCAGTAACT-TTT-TAT-AA-A---A-TG--TA--TATATTTAATGGAAGCC-ATGCTATAC-TTCT-TATAAGAATT-TGTTCCAAGTCACTCTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGTAGAATTT--TAAGT-
i Saimiri_oerstedii.k141_841116                         C 0 I 1
s Saimiri_sciureus.k141_1947592                              2042 207 +     60816 A--AA--AT-TCTCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATT--GATTGT-TTCACCTCAGGGAG--AC--TTTCAGTAACT-TTT-TAT-AA-A---A-TG--TA--TATATTTAATGGAAGCC-ATGCTATAC-TTCT-TATAAGAATT-TGTTCCAAGTCACTCTGTATAATTAATGACTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGTAGAATTT--TAAGT-
i Saimiri_sciureus.k141_1947592                         C 0 I 1
s Saimiri_ustus.k141_1282476                                 1979 207 -     76454 A--AA--AT-TCTCTTT--GAG-G-GA-G-CACAGTACTTAAATTT--AA-AAGATT--GATTGT-TTCACCTCAGGGAG--AC--TTTCAGTAACT-TTT-TAT-AA-A---A-TG--TA--TATATTTAATGGAAGCC-ATGCTATAC-TTCT-TATAAGAATT-TGTTCCAAGTCACTCTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGTAGAATTT--TAAGT-
i Saimiri_ustus.k141_1282476                            C 0 I 1
s Sapajus_apella.ctg10                                   17338713 207 -  30362882 A--AA--CT-TCTCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATT--GATTGT-TTCACCTCAGGGAG--AC--TTTCAGTAACT-TTT-TAT-AA-A---A-TG--TA--TACATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTCTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGT-
i Sapajus_apella.ctg10                                  C 0 I 1
s Sapajus_macrocephalus.k141_966464                         18088 207 -     62485 A--AA--CT-TCTCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATT--GATTGT-TTCACCTCAGGGAG--AC--TTTCAGTAACT-TTT-TAT-AA-A---A-TG--TA--TACATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTCTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGT-
i Sapajus_macrocephalus.k141_966464                     C 0 I 1
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   29376 205 -    114521 A--AA--AT-TACCTTT--GAG-G-GA-G-CAGAGTGGTCATATTT--CT---GATT--TATTGT-TTAAC-CCAGGAAG--AC--TTTCAGTAACT-TTG-TATA-T-A---C-CG--TA--TACATTTAATGGAAGGC-ATGCTATGC-TTCT-TTTAAGAATT-TGTTCCAAGTCTTTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATCCATGCAGAATTT--TAAGTA
i Scalopus_aquaticus.ScaAqu_scaffold_9300               I 4 C 0
s Semnopithecus_entellus.k141_1527475                       25186 207 +     26421 A--AA--AT-TACCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATG--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAGGAC-ATGCCATGC-TTCT-TCTAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGT-
i Semnopithecus_entellus.k141_1527475                   C 0 I 1
s Semnopithecus_hypoleucos.k141_761524                       5646 207 +     20762 A--AA--AT-TACCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATG--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAGGAC-ATGCCATGC-TTCT-TCTAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGT-
i Semnopithecus_hypoleucos.k141_761524                  C 0 I 8
s Semnopithecus_johnii.k141_1351450                         39381 207 +     40653 A--AA--AT-TACCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATG--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAGGAC-ATGCCATGC-TTCT-TCTAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGT-
i Semnopithecus_johnii.k141_1351450                     C 0 I 1
s Semnopithecus_priam.k141_198153                            9938 207 -     12194 A--AA--AT-TACCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATG--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAGGAC-ATGCCATGC-TTCT-TCTAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGT-
i Semnopithecus_priam.k141_198153                       C 0 I 1
s Semnopithecus_schistaceus.k141_653647                     23360 207 -     27512 A--AA--AT-TACCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATG--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAGGAC-ATGCCATGC-TTCT-TCTAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGT-
i Semnopithecus_schistaceus.k141_653647                 C 0 I 1
s Semnopithecus_vetulus.k141_642050                         32379 207 -     33692 A--AA--AT-TACCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATG--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAGGAC-ATGCCATGC-TTCT-TCTAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGT-
i Semnopithecus_vetulus.k141_642050                     C 0 I 1
s Sigmodon_hispidus.SigHis_scaffold_11332                   97266 207 -    120886 A--TA--AT-TACCTCT--GTG-G-A--G-CATAGCAGCTACATTT--CT-AAGATT--TATGGC-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TGG-TATA-A-A---A-TG--TA--TACATTTAATGGAAGGC-ACGCTATGC-TTCT-TCTGAGAATT-TGTTCCAAGTCACTGTGTATAATTAATTGCTTGTCTGAATA-T-T-T---TTT-CAAT---AAA---A-CTATTCCTTCTGAATTT--TAAGTA
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            16014 206 +    739146 A--AA--AT-TACCTCT--TGG-G-GA-G-CAGAGTGGTTAAATTT--CT---GATT--TATTGT-TTAATCTCAGGAAG--AC--TTGCAGTAACT-TTG-TATA-A-A---A-TG--TA--TACATTTAATGGAAGGC-ATGCTATGC-TTCT-TGTAAGCATG-TGTTCCAAGTCTTTGTGCATAATTGATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCATGCAGAATTT--TAAGTA
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17748231 204 -  27805282 C--TG--AG-TGCCTTC----A-G-AA-G-TAGAGTGGTTAGATTT--CT---GATT--TATTGT-GTAATCTCAGGAAG--AC--TTCT-GGGACT-TTG-Tgta-a-a---a-tg--ta--tacatttaatGGAAGGC-AAGCTATGA-TTCT-TACAAGAATT-TGTTCCAAGTCTTTGTGTATAATTAATGACTTGTCGACATA-T-TCT---TTT-CAAT---AAA---A-CCATTCATGCAGAATTT--TAAGTA
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2237501 209 +   2842873 A--CA--AT-TCCCTTT--GGG-GAAA-G-CACAGCAGTGAAATTT--CT-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTG-TTTA-A-A---A-CG--TA--TACATTTAACGGAAGAC-ATGCTATGC-TTCT-TATAAGCACT-TGTTCCAAGTTACTGTGTATAATTAATGGCTTGTctacata-t-t-t---ttt-caat---aaa---a-ctatTCATGCAGAATGT--TAAGTA
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             232393 208 -    276980 A--AA--AT-TACCTTT--TGA-G-GA-G-CAGAATGATTAAATTT--CT-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTG-TATA-A-A---A-TG--TG--TACATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCTTTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCATACAGAATGT--TAAGTA
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            24956 207 +     62062 A--AA--AT-TACCTTT--TGG-G-GA-G-CAGAGTGATTAAATTT--CT-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAG-AACT-TTG-TATA-A-A---A-TG--TG--TACATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCTTTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCATACAGAATGT--TAAGTA
i Suricata_suricatta.SurSur_flattened_line_20339        I 1 C 0
s Sus_scrofa.CM000824.4                                 189269864 208 + 218635234 a--aa--at-taccttt--cgT-G-GA-A-CAGAGTGGTTAAATTT--CT-AAGATT--TATTGT-TTAACCTCAGAAAG--AC--TCTCAGTAACT-ttg-tata-a-a---a-tg--ta--tacatttaatggAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCTTTGTATATAATTAATGACTTGCctacata-t-t-t---ttt-caat---aaa---a-ctatCCATGCAGAATTT--TAAGTA
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        12316 208 -  13920577 A--AA--AA-TACCTTT--GAG-G-TA-G-CACAGTGATTAAATTT--AA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAAGAC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATAAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGTA
i Symphalangus_syndactylus.tarseq_24                    I 3 I 741
s Tadarida_brasiliensis.TadBra_scaffold_148405               3634 208 -      6063 C--AA--AT-TACTTTT--GGG-A-GA-A-CAGAGTGGTTAAATTT--CC-AAGATT--TATTGT-TTAACCTCAGAAAG--AC--TTTCAGTTACT-TTG-AAGA-A-A---A-TG--TA--TACATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCTTTGTGGATAATTAATGGCTTGCCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCATGCAGAATTT--TAAGTA
i Tadarida_brasiliensis.TadBra_scaffold_148405          I 55 I 228
s Tamandua_tetradactyla.TamTet_scaffold_26877               12742 208 +     45698 A--AA--AT-TATCTTC--GGG-G-AA-G-CAGAGCACTTAAATTT--CT-AAGATT--TATTGT-TGAACCTTAGGAAG--AC--TTTCAGTAACT-TTG-CTTG-A-A---A-TG--TA--TGTATTTAATGGAAGGC-ATACTATGC-TTCT-TATAAGAATT-TGTTCCCAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---G-CTATTCATGCAGAATTT--TAAGTA
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      804730 209 +   1148477 A--AG--AT-TACCTTT--GGG-G-GAGG-CAGAGTGGTTAAATTT--CT-AAGATT--TATTGT-TTAGCCACCAGAAG--AC--TTTCAGCAACT-TTG-TATA-A-A---A-CG--TA--TACATTTAACGGAAAGC-ATGCTATGC-TTCT-TACAAGAATT-TGTTCCAAGTCTTTGCGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCATGCAGAATTT--TAAGTA
i Tapirus_indicus.TapInd_scaffold_176                   I 1 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  55391 209 +     99546 A--AA--AT-TACCTTT--GGG-G-GAGG-CAGAGTGGTTAAATTT--CT-AAGATT--TATTGT-TTAACCACCGGAAG--AG--TTTCAGCAACT-TTG-TATA-A-A---A-TG--TA--TACATTTAATGGAAAGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCTTTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCATGCAGAATTT--TAAATA
i Tapirus_terrestris.TapTer_scaffold_14939              I 1 C 0
s Tarsius_lariang.k141_609102                               24048 208 +     42269 A--AA--AT-TACGTTT--GAG-G-GA-G-CACAGTGGCTAAATTT--CA-AAGATT--TATTTT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTG-TATA-A-A---A-TG--TA--TACATTTAATGGAAGGC-TTGGCATGT-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCATGCAGAATTT--TAAGTA
i Tarsius_lariang.k141_609102                           I 3 C 0
s Tarsius_wallacei.k141_48636                               57364 208 +     65473 A--AA--AT-TACGTTT--GAG-G-GA-G-CACAGTGGCTAAATTT--CA-AAGATT--TATTTT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTG-TATA-A-A---A-TG--TA--TACATTTAATGGAAGGC-TTGGCATGT-TTCT-TATAAGAATT-TGTTCCAAGTTACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCATGCAGAATTT--TAAGTA
i Tarsius_wallacei.k141_48636                           I 3 C 0
s Theropithecus_gelada.CM009951.1                       194004676 208 - 194193292 a--aa--at-taccttT--GAG-G-AA-G-CACAGTggttaaattt--aa-aagatt--tattgT-TTAACCTCAGGAAG--AC--TTTCAGtaact-ttt-tata-a-a---a-tg--ta--tacatttaatggAAGAC-ATGCCATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTctacata-t-t-t---ttt-caat---aaa---a-ctgtTCGTGCAGAATTT--TAAGTA
i Theropithecus_gelada.CM009951.1                       C 0 I 1
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             36898 206 -     47444 T--AT--AT-CGCCTTT--CGG-A-TA-G-TATAGTAGTTACATTT--CT-AAGATT--TATTGC-TTTACCTCAGGAAG--AC--TTACAGTAACT-TTG-TATA-A-A---A-CG--TA--TACATTTAATGGAAGTC-C--CCATGC-T-CT-TATAAGAATT-TGTTCCAAGTCACTGTATATAATTAATAGCTACTCTACATA-T-T-T--TTTT-CAGC---AAA---A-ATACTCATGCAGAATTT--TAAGTA
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  1629 205 +      6782 A--AA--TC-TACCTTC--AG--A-AA-G-CATAGTGGTTAAAGTT--CT-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTG-TTTG-A-A---A-TG--TA--TGTACTTAATGGAAGGC-GTGCTATGC-TTCT-TATAAGAATT-TGTTCCCAGTCACTG--TATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCATGCAGAATTT--TAAGTA
i Tolypeutes_matacus.TolMat_scaffold_269431             I 1 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  133880 208 -    259118 A--AA--AT-TACTTTT--G-GGA-GA-G-CAGAGTGGTTAAATTT--CT-AAGATT--TATTGT-TTAACCTCAGAAGG--AC--TTTCAATTTCT-TTG-TATA-A-A---A-TG--TA--TACATTTAATGGAAAGC-ATGCTATGC-TTTT-TACAAGAACT-TCTTCCAAGTCTTTGTGTATAATTAATGGCTTGCCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCATGCAGAATTT--TAAGTA
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        23756 207 +     38948 A--AA--AT-TACCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATG--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAGGAC-ATGCCATGC-TTCT-TCTAAGAATC-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGT-
i Trachypithecus_auratus.k141_738098                    C 0 I 1
s Trachypithecus_crepusculus.k141_1588528                   17483 207 -     32910 A--AA--AT-TACCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATG--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAGGAC-ATGCCATGC-TTCT-TCTAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGT-
i Trachypithecus_crepusculus.k141_1588528               C 0 I 1
s Trachypithecus_cristatus.k141_27198                       23381 207 +     24652 A--AA--AT-TACCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATG--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAGGAC-ATGCCATGC-TTCT-TCTAAGAATC-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGT-
i Trachypithecus_cristatus.k141_27198                   C 0 I 1
s Trachypithecus_francoisi.k141_1178450                      2259 207 -      3559 A--AA--AT-TACCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATG--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAGGAC-ATGCCATGC-TTCT-TCTAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGT-
i Trachypithecus_francoisi.k141_1178450                 C 0 I 1
s Trachypithecus_geei.k141_670367                           40205 207 -     54611 A--AA--AT-TACCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATG--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAGGAC-ATGCCATGC-TTCT-TCTAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGT-
i Trachypithecus_geei.k141_670367                       C 0 I 1
s Trachypithecus_germaini.k141_809503                       16203 208 +     17312 A--AA--AT-TACCTTT--CAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATG--TATTGTGTTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAGGAC-ATGCCATGC-TTCT-TCTAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGT-
i Trachypithecus_germaini.k141_809503                   C 0 I 1
s Trachypithecus_hatinhensis.k141_357672                    23567 207 -     25040 A--AA--AT-TACCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATG--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAGGAC-ATGCCATGC-TTCT-TCTAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGT-
i Trachypithecus_hatinhensis.k141_357672                C 0 I 1
s Trachypithecus_laotum.k141_171445                          2228 207 +      3528 A--AA--AT-TACCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATG--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAGGAC-ATGCCATGC-TTCT-TCTAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGT-
i Trachypithecus_laotum.k141_171445                     C 0 I 1
s Trachypithecus_leucocephalus.k141_283605                  48595 207 +     51589 A--AA--AT-TACCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATG--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAGGAC-ATGCCATGC-TTCT-TCTAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGT-
i Trachypithecus_leucocephalus.k141_283605              C 0 I 1
s Trachypithecus_melamera.k141_238507                       11771 207 +     14732 A--AA--AT-TACCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATG--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACAGTTAATGGAGGAC-ATGCCATGC-TTCT-TCTAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGT-
i Trachypithecus_melamera.k141_238507                   C 0 I 1
s Trachypithecus_obscurus.k141_1115109                       2248 207 -     28054 A--AA--AT-TACCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATG--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAGGAC-ATGCCATGC-TTCC-TCTAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGT-
i Trachypithecus_obscurus.k141_1115109                  C 0 I 1
s Trachypithecus_phayrei.ctg3                            44657043 207 -  44834318 A--AA--AT-TACCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATG--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAGGAC-ATGCCATGC-TTCT-TCTAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGT-
i Trachypithecus_phayrei.ctg3                           C 0 I 1
s Trachypithecus_pileatus.k141_469329                        2053 207 +      3372 A--AA--AT-TACCTTT--GAG-G-GA-G-CACAGTGGTTAAATTT--AA-AAGATG--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTT-TATA-A-A---A-TG--TA--TACATTTAATGGAGGAC-ATGCCATGC-TTCT-TCTAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTGTTCGTGCAGAATTT--TAAGT-
i Trachypithecus_pileatus.k141_469329                   C 0 I 1
s Tragulus_javanicus.TraJav_scaffold_14717                   3218 210 +     90398 C--AA--AT-TACCTTT--GGG-G-GAAA-CAGCGTAGTTAAATTT--CT-AAGATT--TATTGT-TTGACCTCAGGAAG--AC--TTTCAGTAAGT-CTG-TGTA-A-A---A-TG--TA--TACATTTAATGGAAGGCTATGCTATGC-TTCT-TCTAAGAATT-TGTTCCAAGTCTCTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATCCACACAGAATTT--TAAGTA
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16079410 114 +  31416278 --------------------------------------------------------------------------------------------------------------------------------ttaatggaagtC-GTGCTATGC-TTCT-TACAAGAATT-GGTTCCAAGTCACTGTGTATAATTAATGGCTTGtctacata-t-t-tt--ttt-caat---aaa---a-ctaTCCATGCAGAATTT--TAAGTA
i Trichechus_manatus.JH594618.1                         I 83 C 0
s Tupaia_chinensis.KB320831.1                             2789718 208 -   3938065 a--aa--at-tagcctc--cag-g-ga-g-cacagtggttaagttt--cC-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTG-TATA-A-G---A-TG--TA--TACATTTAATGGAAGGC-ATGTTATAC-TTCT-TATAAGAATT-TGTTCCAAGTCATTGTGTATAATTAATGGCTTGTctacata-t-t-t---ttt-caat---aaa---a-cgATCCATGCAGAATTT--TAAGTA
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    2238 208 +     13056 A--AA--AT-TAGCCTC--CAG-G-GA-G-CACAGTGGTGAAGTTG--CC-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTG-TATA-A-A---A-TG--TA--TACATTTAATGGAAGGC-ATGTTATAC-TTCT-TCTAAGAATT-TGTTCCAAGTCATTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCATGCAGAATTT--TAAGTA
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69311444 208 -  96451834 a--aa--at-taccttt--ggg-G-GA-A-GAGAGTGGTTAAATTT--CT-AAGATT--TACTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACt-ttg-tata-a-a---a-tg--ta--tatgtttaatgGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCTTTGTGTATAATTAAAGGCTTGCctacata-t-t-t---ttt-caat---aaa---a-ctatCCATGCAGAATTT--TAAGTA
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 24566 203 -     25548 A--AA--AT-TACCTCT--GGG-G-GA-G-CAGAGTGGTCACATCT--CT---GATT--TATTGT-TTAAC-CCAGGAAG--TC--TTTCAGTAACT-TTG-TATA-C-A---A-CA--TA--TACATTTAATGGAAGGC-ATGCTA-GC-TTCT-TTTAAGAGTT-TGTTCCAAGTCT-TGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATCCACGCAGAATTT--TAAGTA
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6512181 208 +  28682327 a--aa--at-taccttt--tgg-G-GA-G-CAGAGTGATTAAATTT--CT-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTG-tata-a-a---a-tg--tg--tacatttaatGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCTTTGTGTATAATTAATGGCTTGTctacata-t-t-t---ttt-caat---aaa---a-ctatTCATACAGAATGT--TAAGTA
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  2814 209 -     20643 AA-AA--AT-CACCTTT--GGG-G-GA-G-CACAGTGATTAAGTTT--CA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTG-TATA-A-A---A-TG--TG--TATATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCGTGCAGAATTT--TAAGTA
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             22358 209 -     33872 AA-AA--AT-CACCTTT--GGG-G-GA-G-CACAGTGATTAAGTTT--CA-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTG-TATA-A-A---A-TG--TG--TATATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCGTGCAGAATTT--TAAGTA
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1522672 209 -   2331223 a--aa--at-taccttt--ggG-G-GAAA-CAGAGTGGTTAAATTC--CT-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACt-ttg-aata-a-a---a-tg--ta--tacatttaatgGAAGGC-ATGCTATGC-TTCT-TACAAGAATT-TGTTCCAAGTCTTTGTGTATAATTAATGGCTTGCctacata-t-t-t---ttt-caat---aaa---a-ctatCCATGCAGAATTT--TAAGTA
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                135125 208 -    281493 A--AA--AT-TACCTTT--TGG-G-GA-G-CAGAGTGATTAAATTT--CC-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTG-TACA-A-A---A-TG--TG--TACATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCTTTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCATACAGAATGT--TAAGTA
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       124599 209 -    134049 A--CA--AT-TCCCTTT--GGG-GAAA-G-CACAGTAGTGAAATTT--CT-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTG-TATA-A-A---A-CG--TA--TACATTTAATGGAAGGC-ATGCTATGC-TTCT-TATAAGCACT-TGTTCCAAGTCACTGTGTATAATTAATGGCTTGTCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCAGGCAGAATGT--TAAGTA
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        211655 207 -    227762 A--AA--AT-TACCTTT--TGG-G-GA-G-GAGAGTGATTAAATTT--CT-AAGATT--TATTGT-TTAACCTCAGGAAG--AC--TTTCAGTAACT-TTG-TATA-A-A---A-TG--TG--TACATTTAATGGAAGCC-ATGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTCTTTGCATATAATTAATGGCTTGTCTACATA-T-T-T----TT-CAAT---AAA---A-CTATTCATACAGAATGT--TAAGTA
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     12839 208 -     20485 A--AA--AT-CACCTTT--GGA-A-TA-G-CACAGTAGTTGAATTT--CT-AAGATT--TATTGC-TGAACCTCAGGGTG--GC--TCTCAGTAACT-TTG-CCTA-A-A---A-AG--TA--TACGTTTAATGGAAAGC-GTGCTGTGC-TTCT-TAGAAGAATT-GGTTCCAAGTCACTGTGTATAATTAATGGCTTGCCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATTCCTGCTGAATTT--TAAGCA
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           4940 208 -      8775 A--AA--AT-TACCTTT--GGG-G-GA-A-GAGAGTGGTTAAATTT--CT-AAGATT--TACTGT-TTAAACTCAGGAAG--AC--TTTCAGTAACT-TTG-TATA-A-A---A-TG--TG--TATGTTTAATGGAAGGC-ACGCTATGC-TTCT-TATAAGAATT-TGTTCCAAGTGTTTGTGTATAATTAAAGGCTTGCCTACATA-T-T-T---TTT-CAAT---AAA---A-CTATCCATGCAGAATTT--TAAGTA
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0

a score=0.000000
s hg38.chr4_GL000008v2_random                                9507 122 +    209709 TGCa------ctt-tc-agta-ccagaatgaatata-tct-ttgtgaagatac-c-at-tt--atgta--cc-at-aaca-tcca-aagcat-aatgagga--gattttgatac----actgcagattt-a--aaact--ga-gttgg-a---aaac-aaaa
s Acinonyx_jubatus.LLWD01000356.1                         2031583 122 +   3721120 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CT-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACG--GA-CTTGG-A---AAAC-AAAG
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    110166  81 -    189883 GGCA------TTT-TC-AATA-GCAGAATGAATGTA-TCT-TTGTGAGGAGAC-C-AT-TT--ATCTA--CT-CT-AACA-CCCA-AAGCAT-AATAGCTA--GAC--------------------------------------------------------
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 I 41
s Ailuropoda_melanoleuca.LNAT01000321.1                  10654903  81 +  23371972 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GAC--------------------------------------------------------
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 I 39
s Ailurus_fulgens.LNAC01000003.1                          7091628 122 -  16596857 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-CTTGG-A---AAAC-AAAG
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   10597  81 -     22067 GGCA------TTT-TC-AATA-GCAGAGTGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACG-TCCA-AAGCAT-AATGAGGA--GGC--------------------------------------------------------
i Allactaga_bullata.AllBul_scaffold_70162               C 0 I 39
s Allenopithecus_nigroviridis.k141_3103707                  60524 122 +     61638 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--TC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GATGG-A---AAAC-AAAA
i Allenopithecus_nigroviridis.k141_3103707              I 1 C 0
s Allochrocebus_lhoesti.k141_4825038                        52332 122 +     53391 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAT----ACTGCAGATTT-A--GAACT--GA-GATGG-A---AAAC-AAAG
i Allochrocebus_lhoesti.k141_4825038                    I 1 C 0
s Allochrocebus_preussi.k141_1202907                         3057 122 +     72529 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TTT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAT----ACTGCAGATTT-A--GAACT--GA-GATGG-A---AAAC-AAAG
i Allochrocebus_preussi.k141_1202907                    I 1 C 0
s Allochrocebus_solatus.k141_787528                          2632 122 +      3797 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAT----ACTGCAGATTT-A--GAACT--GA-GATGG-A---AAAC-AAAG
i Allochrocebus_solatus.k141_787528                     I 1 C 0
s Alouatta_belzebul.k141_1818029                             7832  95 -     18050 -------------------------------------TCT-TTGTGAAGATAC-C-AT-TT--ATCCA--CC-AT-AACA-TCCA-AAGCTT-AATGAAGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Alouatta_belzebul.k141_1818029                        I 28 I 1
s Alouatta_caraya.k141_5460                                  8945  95 -     11521 -------------------------------------TCT-TTGTGAAGATAC-C-AT-TT--ATCCA--CC-AT-AACA-TCCA-AAGCAT-AATGAAGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Alouatta_caraya.k141_5460                             I 28 I 1
s Alouatta_discolor.k141_811576                              8509  95 -     21359 -------------------------------------TCT-TTGTGAAGATAC-C-AT-TT--ATCCA--CC-AT-AACA-TCCA-AAGCAT-AATGAAGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Alouatta_discolor.k141_811576                         I 28 I 1
s Alouatta_juara.k141_1856473                                6859 122 +      7227 GGCA------TTT-TC-AATA-CTAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCCA--CC-AT-AACA-TCCA-AAGCAT-AATGAAGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Alouatta_juara.k141_1856473                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          7800  95 -     10438 -------------------------------------TCT-TTGTGAAGATAC-C-AT-TT--ATCCA--CC-AT-AACA-TCCA-AAGCAT-AATGAAGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Alouatta_macconnelli.k141_1331706                     I 28 I 1
s Alouatta_nigerrima.k141_2718643                            4456  95 +      7047 -------------------------------------TCT-TTGTGAAGATAC-C-AT-TT--ATCCA--CC-AT-AACA-TCCA-AAGCAT-AATGAAGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Alouatta_nigerrima.k141_2718643                       I 28 I 1
s Alouatta_palliata.k141_1316127                             8456  94 +     10410 --------------------------------------CT-TTGCTAAGATAT-C-AT-TT--ACCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--AATTTTGATAC----ACTGCAGATTT-A--GGACT--GA-GTTGG-A---AAAC-AAAG
i Alouatta_palliata.k141_1316127                        I 742 T 712
s Alouatta_puruensis.k141_1284840                            1545  95 -      4927 -------------------------------------TCT-TTGTGAAGATAC-C-AT-TT--ATCCA--CC-AT-AACA-TCCA-AAGCAT-AATGAAGA--GACTTTGATAC----ACAGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Alouatta_puruensis.k141_1284840                       I 28 I 1
s Alouatta_seniculus.k141_990213                             4475  95 +      6429 -------------------------------------TCT-TTGTGAAGATAC-C-AT-TT--ATCCA--CC-AT-AACA-TCCA-AAGCAT-AATGAAGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Alouatta_seniculus.k141_990213                        I 28 I 1
s Ammotragus_lervia.NIVO01013474.1                        3518352 122 +   4113121 GGCA------TTT-TC-AATA-GGAGAATGAATGCA-TCT-TTGTGAAGATAC-C-AT-TT--TTCTA--CC-GT-AACA-TCCA-AAGCAT-AATGAAGA--GACTTTGATAC----ACTGCAGATTT-A--GAAAT--GA-CTTGG-A---AAAC-AAGG
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      388526 119 -    631301 GGCA------TTT-TC-AATA-CCAGACTGAATACA-TTT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATG---A--GACTTTGATAC----ACTGCCGATTT-A--GAATT--GA-CTTGA-A---AAAT-AAAG
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            28952 122 +     33004 GGCA------TTT-TC-AATA-GAAGAATGAATGCA-TCT-TTGTGAAGATAC-C-AT-TT--TTCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAAGA--GACTTTGATAC----ACTGCAGATTT-A--GAAAT--GA-CTTGG-A---AAAC-AAAG
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 60168 122 +     78111 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Aotus_azarae.k141_3170768                             I 1 I 1
s Aotus_griseimembra.k141_3275623                            3106 122 +     22701 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Aotus_griseimembra.k141_3275623                       I 1 I 1
s Aotus_nancymaae.KZ196176.1                              5747064 122 +   9889416 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Aotus_nancymaae.KZ196176.1                            I 1 I 1
s Aotus_trivirgatus.k141_1740727                             3649 122 -    104377 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Aotus_trivirgatus.k141_1740727                        I 1 I 1
s Aotus_vociferans.k141_718647                               3655 122 +     23246 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Aotus_vociferans.k141_718647                          I 1 I 1
s Aplodontia_rufa.AprRuf_scaffold_156013                     1671  81 +      5067 GGCA------CTT-TC-AATA-CCACAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GAC--------------------------------------------------------
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 I 41
s Arctocebus_calabarensis.k141_1161114                      15618 122 +     17483 GGCA------CTT-GC-AATA-CCAGAACGAATGTA-TCT-TTGTGAAGACAG-C-AT-TT--ATCTA--CC-AT-AACA-TACC-AAGCAT-AATAAAGA--GACTTGGATAC----ACTGTAGATTC-A--GAACT--GA-GATGG-A---AAAC-AAAG
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 6921 119 -     29036 GGCA------TTT-TC-AATA-CCAGACAGAATATA-TCT-TTGTGCAGATAC-C-GT-TT--ATCTA--CC-GT-AACA-TCCG-AAGCAT-AATG---A--GACTTTGATAC----ACTGCCGATGT-A--GAACT--GA-CTTGA-C---AAAT-AAAG
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9536917 122 +  39197703 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAAGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Ateles_geoffroyi_b.tarseq_2582                           I 1 I 1
s Ateles_belzebuth.k141_1348307                             58201 122 +     85812 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAAGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Ateles_belzebuth.k141_1348307                         I 1 I 1
s Ateles_chamek.k141_1072810                                 9200 122 +     89302 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAAGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Ateles_chamek.k141_1072810                            I 1 I 1
s Ateles_geoffroyi_a.k141_1300742                             13705 122 -     58268 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAAGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Ateles_geoffroyi_a.k141_1300742                         I 1 I 1
s Ateles_marginatus.k141_899112                             61696 122 +    119057 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCG-AAGCAT-AATGAAGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Ateles_marginatus.k141_899112                         I 1 I 1
s Ateles_paniscus.k141_1631200                               3647 122 -     25888 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AATA-TCCA-AAGCAT-AATGAAGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Ateles_paniscus.k141_1631200                          I 1 I 1
s Avahi_laniger.k141_2840928                                 4399 122 -     16375 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAAGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                               719 122 +      2719 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26378369 119 +  51448160 GGTA------TTT-TC-AATA-CGAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTACGGATTT-A--GAAAT--ga-cttgg-a---aa----taa
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        3600 119 -     13118 GGTA------TTT-TC-AATA-CGAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTACGGATTT-A--GAAAT--ga-cttgg-a---aa----taa
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   41447 122 -     72089 GGCA------TTT-TC-AATA-GGAGAATGAATGCA-TCT-TTGTGAAGATAC-C-AT-TT--TTCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAAGA--GACTTTGTTAC----ACTGCAGATTT-A--GAAAT--GA-CTTGG-A---AAAC-AAAG
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6557458 122 +   6870073 GGCA------TTT-TC-AATA-GGAGAATGAATGCA-TCT-TTGTGAAGATCC-C-AT-TT--TTCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAAGA--GACTTTGATAT----ACTGCAGATTT-A--GAAAT--GA-CTTGG-A---AAAC-AAAG
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138137697 122 - 161108492 GGCA------TTT-TC-AATA-GGAGAATGAATGCA-TCT-TTGTGAAGATCC-C-AT-TT--TTCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAAGA--GACTTTGATAT----ACTGCAGATTT-A--GAAAT--GA-CTTGG-A---AAAC-AAAG
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     570071 122 -    998990 GGCA------TTT-TC-AATA-GGAGAATGAATGCA-TCT-TTGTGAAGATCC-C-AT-TT--TTCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAAGA--GACTTTGATAT----ACTGCAGATTT-A--GAAAT--GA-CTTGG-A---AAAC-AAAG
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136293430 122 - 158972876 GGCA------TTT-TC-AATA-GGAGAATGAATGCA-TCT-TTGTGAAGATCC-C-AT-TT--TTCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAAGA--GACTTTGATAT----ACTGCAGATTT-A--GAAAT--GA-CTTGG-A---AAAC-AAAG
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1229186 122 -   1914593 GGCA------TTT-TC-AATA-GGAGAATGAATGCA-TCT-TTGTGAAGATCC-C-AT-TT--TTCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAAGA--GACTTTGATAT----ACTGCAGATTT-A--GAAAT--GA-CTTGG-A---AAAC-AAAG
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               111541 121 -    171031 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC-A-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTAGG-A---AAAC-AAAG
i Cacajao_ayresi.k141_724503                            I 1 I 1
s Cacajao_calvus.k141_96166                                 10567 121 +    125063 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC-A-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTAGG-A---AAAC-AAAG
i Cacajao_calvus.k141_96166                             I 1 I 1
s Cacajao_hosomi.k141_303789                                12615 121 -    216513 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC-A-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTAGG-A---AAAC-AAAG
i Cacajao_hosomi.k141_303789                            I 1 I 1
s Cacajao_melanocephalus.k141_1160263                        5155 121 -    134917 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC-A-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTAGG-A---AAAC-AAAG
i Cacajao_melanocephalus.k141_1160263                   I 1 I 1
s Camelus_bactrianus.KN276303.1                           3217771 122 -   8989139 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGAAAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATAAGAA--GACTTTGATAC----AATGCAGATTT-A--GAACT--GA-CTTGG-A---AAAC-AAAG
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           395475 122 -  15254737 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGAAAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATAAGAA--GACTTTGATAC----AATGCAGATTT-A--GAACT--GA-CTTGG-A---AAAC-AAAG
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2971209 122 +   6889770 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGAAAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATAAGAA--GACTTTGATAC----AATGCAGATTT-A--GAACT--GA-CTTGG-A---AAAC-AAAG
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11516287 122 +  39901454 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-CTTGG-A---AAAC-AAAG
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   11305 122 +     87036 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-CTTGG-A---AAAC-AAAG
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11262948 122 -  35597290 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-CTTGG-A---AAAC-AAAG
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11085477 122 +  39895921 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-CTTGG-A---AAAC-AAAG
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16452501 122 -  44759192 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-CTTGG-A---AAAC-AAAG
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21323456 122 + 157394656 GGCA------TTT-TC-AATA-GGAGAATGAATGCA-TCT-TTGTGAAGATAC-C-AT-TT--TTCTA--CC-GT-AACA-TCCA-AAGCAT-AATGAAGA--GACTTTGATAC----ACTGCAGATTT-A--GAAAT--GA-CTTGG-A---AAAC-AAAG
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135704683 122 - 157403528 GGCA------TTT-TC-AATA-GGAGAATGAATGCA-TCT-TTGTGAAGATAC-C-AT-TT--TTCTA--CC-GT-AACA-TCCA-AAGCAT-AATGAAGA--GACTTTGATAC----ACTGCAGATTT-A--GAAAT--GA-CTTGG-A---AAAC-AAAG
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_1557951                  235  84 +       644 GGCG------CTTTTC-AATA-CCAGAATGAATGGA-TCT-TTGTGAAGACAT-C-AT-TT--ATCTA--CG-AT-AACA-TCCG-TTTCAT-AATGAGGAGAGAC--------------------------------------------------------
i Capromys_pilorides.CapPil_scaffold_1557951            N 0 I 39
s Carlito_syrichta.NW_007248099.1                          306772 121 +    345090 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-A-AT-TT--ATCTA--TC-AT-AACAATTCA-AAGCAT-AATGAGGA--GACT--GATAC----AGTGCGGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAGG
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               57720 119 +     67245 GGCA------TTT-TC-AATA-CCAGACTGAATATA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCG-AAGCAT-AATG---A--GACTTTGATAC----ACTGCCGATTT-A--GAACT--GA-CTTGA-A---AAAT-AAAG
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   28204  81 +     33760 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--TC-AT-AACA-TACA-ATGCAT-AATGAGGA--GAC--------------------------------------------------------
i Castor_canadensis.CasCan_scaffold_47037               C 0 I 40
s Catagonus_wagneri.CatWag_scaffold_1305                   157015 122 -    276539 GGCA------TTT-TC-AATA-GCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-CTTGA-A---AAAC-AAAG
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15784376  84 -  24422027 NNNN------NNNTTC-AATA-CCAGAATGAATATA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--TG-AT-AACA-TTCA-TTGCAT-AATGAGAAGAGAC--------------------------------------------------------
i Cavia_aperea.AVPZ01000278.1                           C 0 I 39
s Cavia_porcellus.DS562889.1                             15796308  84 -  24440124 GGCA------CTTTTC-AATA-CCAGAATGAATATA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--TG-AT-AACA-TTCA-TTGCAT-AATGAGAAGAGAC--------------------------------------------------------
i Cavia_porcellus.DS562889.1                            C 0 I 39
s Cavia_tschudii.CavTsc_scaffold_488                       174499  84 +    436027 GGCA------CTTTTC-AATA-CCAGAATGAATATA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--TG-AT-AACA-TTCA-TTGCAT-AATGAGAAGAGAC--------------------------------------------------------
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 I 39
s Cebus_albifrons.Contig22                               18888393 122 -  29618158 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAT-C-AT-TT--ATCTA--CC-AA-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----CCTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-CAAG
i Cebus_albifrons.Contig22                              I 1 I 1
s Cebus_olivaceus.k141_93739                                 5937 122 -     26817 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAT-C-AT-TT--ATCTA--CC-AA-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----CCTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-CAAG
i Cebus_olivaceus.k141_93739                            I 1 I 1
s Cebus_unicolor.k141_239009                                10180 119 +     25043 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAT-C-AT-TT--ATCTA--CC-AA-AACA-TCCA-AAGCAT-AATGAG-----ATTTTGATAC----CCTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-CAAG
i Cebus_unicolor.k141_239009                            I 1 I 1
s Cephalopachus_bancanus.k141_702587                         5809 120 +     21754 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-A-AT-TT--ATCTA--TC-AT-AACA-TTCA-AAGCAT-AATGAGGA--GACT--GATAC----ACTGCGGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAGG
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4361495 122 +   7569818 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-CTTGG-A---AAAC-AAAG
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         1250 122 -      9338 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-CTTGG-A---AAAC-AAAG
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6552317 121 +   6739814 -GCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGAA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Cercocebus_atys.KQ010443.1                            I 1 I 1
s Cercocebus_chrysogaster.k141_2951608                      53794 121 -     54931 -GCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGAA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Cercocebus_chrysogaster.k141_2951608                  I 1 C 0
s Cercocebus_lunulatus.k141_3387186                         18778 121 -     19697 -GCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-GT-AACA-TCCA-AAGCAT-AATGAGAA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Cercocebus_lunulatus.k141_3387186                     I 1 C 0
s Cercocebus_torquatus.k141_3969582                         56309 121 -    107033 -GCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGAA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Cercocebus_torquatus.k141_3969582                     I 1 I 1
s Cercopithecus_ascanius.k141_3371259                        2753 122 -      3853 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AAGGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GATGG-A---AAAC-AAAG
i Cercopithecus_ascanius.k141_3371259                   I 1 C 0
s Cercopithecus_cephus.k141_598190                          26686 122 +     30494 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AAGGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GATGG-A---AAAC-AAAG
i Cercopithecus_cephus.k141_598190                      I 1 I 1
s Cercopithecus_diana.k141_1490386                           2710 122 -      4022 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AAGGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GATGG-A---AAAC-AAAG
i Cercopithecus_diana.k141_1490386                      I 1 C 0
s Cercopithecus_hamlyni.k141_129805                           488 115 +     16677 --------------TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCGA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Cercopithecus_hamlyni.k141_129805                     n 122 T 104
s Cercopithecus_lowei.k141_623764                           21393 121 +     35983 GGCA------CTT-TC-AATA-CCAGA-TGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AAGGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GATGG-A---AAAC-AAAG
i Cercopithecus_lowei.k141_623764                       I 1 I 1
s Cercopithecus_albogularis.ctg51                              11987929 122 +  12117833 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AAGGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GATGG-A---AAAA-AAAG
i Cercopithecus_albogularis.ctg51                             I 1 I 1
s Cercopithecus_mona.ctg12                               46474682 122 +  46592721 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AAGGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GATGG-A---AAAC-AAAG
i Cercopithecus_mona.ctg12                              I 1 I 1
s Cercopithecus_neglectus.k141_1474992                      32509 122 +     33420 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AAGGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GATGG-A---AAAC-AAAG
i Cercopithecus_neglectus.k141_1474992                  I 1 C 0
s Cercopithecus_nictitans.k141_675209                        2545 122 -      3443 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AAGGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GATGG-A---AAAC-AAAG
i Cercopithecus_nictitans.k141_675209                   I 1 C 0
s Cercopithecus_petaurista.k141_2037881                      3536 122 -      4669 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AAGGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GATGG-A---AAAC-AAAG
i Cercopithecus_petaurista.k141_2037881                 I 1 C 0
s Cercopithecus_pogonias.k141_1977419                        3331 122 -      4411 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGCGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GATGG-A---AAAC-AAAG
i Cercopithecus_pogonias.k141_1977419                   I 1 C 0
s Cercopithecus_roloway.k141_3372345                         2861 122 -      4205 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AAGGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GATGG-A---AAAC-AAAG
i Cercopithecus_roloway.k141_3372345                    I 1 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_1070855          1074 122 -      1715 GGCA------CTT-TC-AATA-CTATAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGTTAC----ACTGCAGATTT-A--GAACA--GA-GTTGG-A---AAAC-AAAG
i Chaetophractus_vellerosus.ChaVel_scaffold_1070855     C 0 C 0
s Cheirogaleus_major.k141_1157592                           56704 122 -     68416 GGCA------CTT-TC-AATA-CCAGAATGAATATA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            5746 122 +     13308 GGCA------CTT-TC-AATA-CCAGAATGAATATA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             3253  65 -     18223 --------------------------------------------------------AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA--------------------
i Cheracebus_lucifer.k141_619653                        I 44 I 15
s Cheracebus_lugens.k141_203936                             20276  65 +     25473 --------------------------------------------------------AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA--------------------
i Cheracebus_lugens.k141_203936                         I 44 I 15
s Cheracebus_regulus.k141_2128895                           39315  65 +     57117 --------------------------------------------------------AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA--------------------
i Cheracebus_regulus.k141_2128895                       I 44 I 15
s Cheracebus_torquatus.k141_315545                          43990  65 +     54541 --------------------------------------------------------AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA--------------------
i Cheracebus_torquatus.k141_315545                      I 44 I 15
s Chinchilla_lanigera.JH721867.1                         15959542  83 +  43084221 GGCA------CTTTTC-AATA-CCAG-ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCCA--CC-AT-AACA-TCAT-TCGCAT-AATGAAGAGAGAC--------------------------------------------------------
i Chinchilla_lanigera.JH721867.1                        C 0 I 39
s Chiropotes_israelita.k141_1189915                         68763 121 +    196370 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC-A-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTAGG-A---AAAC-AAAG
i Chiropotes_israelita.k141_1189915                     I 1 I 1
s Chiropotes_sagulatus.k141_773804                          12943 121 +     40510 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC-A-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTAGG-A---AAAC-AAAG
i Chiropotes_sagulatus.k141_773804                      I 1 I 1
s Chlorocebus_aethiops.ctg22                             15136143 122 -  15256731 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAT----ACTGCAGATTT-A--GAACT--GA-GATGG-A---AAAC-AAAG
i Chlorocebus_aethiops.ctg22                            I 1 I 1
s Chlorocebus_pygerythrus.k141_1486215                      31189 122 -     53260 GGCA------CTT-TC-AGTA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAT----ACTGCAGATTT-A--GAACT--GA-GATGG-A---AAAC-AAAG
i Chlorocebus_pygerythrus.k141_1486215                  I 1 I 1
s Chlorocebus_sabaeus.CM001963.2                        101141638 122 + 101219884 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAT----ACTGCAGATTT-A--GAACT--GA-GATGG-A---AAAC-AAAG
i Chlorocebus_sabaeus.CM001963.2                        I 1 I 1
s Choloepus_didactylus.ChoDid_scaffold_36182                14674 122 -     21363 GGCA------ATT-TC-AATA-CCAGAATGAATGCA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTG--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           759985 122 +    964067 GGCA------ATT-TC-AATA-CCAGAATGAATGCA-TCT-TTGTGAAGATAG-C-AT-TT--ATCTG--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_141308              6786 121 -     12508 GGCA------CTT-TC-AGTA-CCAGAATGAATGTA-TCT-TTCTGAAGATAC-C-AT-TT--ATCTA--CT-AT-AACA-TTCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTACAGATTT-A--GAATT--GA-GTTGG-G----AAC-AAAG
i Chrysochloris_asiatica.ChrAsi_scaffold_141308         C 0 C 0
s Colobus_angolensis.KN985967.1                          10880217 122 +  10971483 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GATGG-A---AAAC-AAAG
i Colobus_angolensis.KN985967.1                         I 1 I 1
s Colobus_guereza.LG08                                  147661375 122 + 156195979 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GATGG-A---AAAC-AAAG
i Colobus_guereza.LG08                                  I 1 I 1
s Colobus_polykomos.k141_1406057                            13381 103 +     23629 ----------------------------TGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GATGG-A---AAAC-AAAG
i Colobus_polykomos.k141_1406057                        I 20 I 1
s Condylura_cristata.JH655880.1                          60610975 122 +  78930452 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-CTTGG-A---AAAC-AAAG
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         37433 122 -     40477 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TGGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-ACCA-AGGCAT-AATGAGGA--GACTATGATAT----ACTGCAGATTT-A--GGAGT--GA-CTTGA-A---AAAC-AAAG
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 275255  81 -    399297 GGCA------TTT-TC-AATA-GCAGAATGAATGTA-TCT-CTGTGAAGATAC-C-AT-TT--ATCTA--CT-AT-AACA-CCCA-AAGCAT-AATGGCCA--AAT--------------------------------------------------------
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 I 41
s Cricetulus_griseus.LT883672.1                          53026788  80 +  72327488 GGCA------TTT-TC-AATA-GCA-AATGAACGTA-TCT-TTGTGAAGATAG-C-AT-TT--ATCTA--CT-AC-AACA-CCCA-AAACAT-AATGGCTA--GAC--------------------------------------------------------
i Cricetulus_griseus.LT883672.1                         C 0 I 41
s Crocidura_indochinensis.CroInd_scaffold_38409             17910 124 -     19186 GGCA------TTT-TC-AATT-CCAGAATGAATGTA-TCT-TTGTGAAGATAT-C-AT-TC--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAAAA--GACTTAGGTAC----ACTGTAGATTT-T--AAAATGTCG-CTTAA-T---ATGC-AAAA
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            49595 122 -     70449 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACG--GA-CTTGG-A---AAAC-AAAG
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  205960  75 -    956709 GGCA------CTT-TC-AATG-CTAGAATGAGGGTG-TCT-TTGTGAAGATAC-C-AT-TT--ATCTC--CC-AT-AACA-TCCC-AAGCA-------CGG--GAC--------------------------------------------------------
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 I 39
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 28319  85 -     67205 GGCA------TTTTTC-AATA-CCGGAATGAATGAA-TCTTTTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-TTGCAT-AATGAGGAGAGAC--------------------------------------------------------
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 I 39
s Cuniculus_paca.CunPac_flattened_line_16637                15148  84 +     26546 GGCG------CTTTTC-AATA-CCAGAATGAATATA-TCT-TTGTGAGGATAC-T-AT-TT--ATCTA--CC-AT-AACA-TCCA-TTGTAT-AATGAGTAGAGAC--------------------------------------------------------
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 I 39
s Dasyprocta_punctata.DasPun_flattened_line_634             56631  84 -    236241 GGCA------CTTTTC-AATA-CCAGAATGAATATA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-TTGCAT-AATGAGGAGAGAC--------------------------------------------------------
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 I 39
s Dasypus_novemcinctus.JH568778.1                          179884 122 -   6883506 GGCA------CTT-TC-AATA-CCATAATGAATGTA-TCT-TTGTGAAGATTC-C-AT-TT--ATCTA--CT-AT-AACA-TCCG-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--AG-GTTGG-A---AAAC-AAAG
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16842572 122 +  31942871 GGCA------CTT-TC-AATA-CCAGAATAAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACG-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80035053 119 -  96802777 GGTA------TTT-TC-AATA-TGAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTACGGATTT-A--GAAAT--ga-cttgg-a---aa----taa
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18697030 119 -  18957592 GGCA------TTT-TC-AATA-CCAGACTGAATACA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-GT-AACA-TCCG-AAGCAC-AGAG---A--GACTTTGATAC----ACGGCCGATTT-A--GAACT--GA-CTTga-a---aaat-aaag
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 320154 121 +    993696 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--CACTTT-ATAC----ACTGTAGATTT-A--GAACT--GA-CTTGG-A---AAAC-AAAG
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                    796 123 +    151128 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-GT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCATTAATGAGGA--GACTTTGATCC----ACTGCAGATTC-G--GAACT--GA-CTTGG-A---AAAC-AAAG
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   155427  83 +    228994 GGCA------CTTTTT-AATA-CCAG-ATAAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-TCACAT-AATGAGGAGAGAT--------------------------------------------------------
i Dinomys_branickii.DinBra_scaffold_1996                C 0 I 37
s Dipodomys_ordii.KN672545.1                              3653176  81 +   4240102 GGCA------CTT-TC-AATA-CCAGAACGAATGTG-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGAAT-AATGAGGA--GAT--------------------------------------------------------
i Dipodomys_ordii.KN672545.1                            C 0 I 39
s Dipodomys_stephensi.DipSte_scaffold_44365                 24733  81 +     28912 GGCA------CTT-TC-AATA-CCAGAACGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGAAT-AATGAGGA--GAT--------------------------------------------------------
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 I 38
s Dolichotis_patagonum.DolPat_scaffold_14102                33892  84 -     73477 GGCA------CTTTGC-AATA-CCAGAATGAATATA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--TG-AT-AACA-TCCA-TTGCAT-AATGAGGAGAGAC--------------------------------------------------------
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 I 39
s Eidolon_helvum.KE772537.1                                 10400 122 +     24177 GGTG------TTT-TT-AATT-CCAGAATGAATATA-TCT-TTCTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AGCA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ATTGCAGATTT-A--GAACT--GA-CTTGA-A---AAAC-AAAG
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1489714 122 +   1727528 GGCA------TTT-TC-AATA-GGAGAATGAATGCA-TCT-TTGTGAAGATAC-C-AT-TT--TTCTA--CC-AT-AGCA-TCCT-AAGCAT-AATGAAGA--GACTTCGATAC----ACTGCAGTTTT-A--GAAAT--GA-CTTGG-A---AAAC-AAAG
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7804469 119 +  15467074 -GCA------CTT-CC-AA----CAGGATGAATGTA-TCT-TTGTGAAGATAC-A-AT-TT--ATCTA--CC-AT-AGCA-TCCA-AAGCAT-AATGAGGA--GGCTTTGATAC----ATAGCAGATTT-A--GAACA--GAAGTTGG-A---AAAC-AAAG
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        237446  80 -    369425 GGCA------TTT-TC-AATA-GAA-AATGAATGTA-TCT-TTGTGAAGATAG-C-AT-TT--ATCTA--CT-AT-AACA-CCCA-ACGCAT-AATGGCTA--GAC--------------------------------------------------------
i Ellobius_lutescens.LOEQ01003611.1                     C 0 I 41
s Ellobius_talpinus.LOJH01090055.1                           4459  80 -      7838 GGCA------TTT-TC-AATA-GAA-AATGAATGTA-TCT-TTGTGAAGATAG-C-AT-TT--ATCTG--CT-AT-AACA-CCCA-ACACAT-AATGGCTA--GAC--------------------------------------------------------
i Ellobius_talpinus.LOJH01090055.1                      C 0 I 41
s Enhydra_lutris.KZ291749.1                              85869360 122 +  99434291 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-CTTGG-A---AAAC-AAAG
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4701989 121 +   6522550 GGCA------TTT-TC-AATA-CGAGGATGAATATA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AC-AACA-TCCA-AAGCAT-AATAAGGA--GACTTCGATAC----TCTGCAGATTA-A--GAACC--GA-CTTGA-A----AAC-AAAG
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5850888 122 -   7175178 GGCA------TTT-TA-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----AAGGCAGATTT-A--GAACT--GA-CTTGG-A---AAAC-AAAG
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13349390 122 +  41866177 GGCA------TTT-TA-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----AAGGCAGATTT-A--GAACT--GA-CTTGG-A---AAAC-AAAG
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          10880 122 +     92910 GGCA------TTT-TA-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----AAGGCAGATTT-A--GAACT--GA-CTTGG-A---AAAC-AAAG
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11530677 122 +  16010500 GGCA------CTT-TC-AATA-CCAGAATAAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--GC-AT-ACCC-TCCA-AAGCAT-AATAAGGA--AACCATGATGT----ACTGCAGATTT-A--GCACT--GG-CTTGC-A---AAAC-AAAG
i Erinaceus_europaeus.JH835290.1                        I 79 C 0
s Erythrocebus_patas.Contig8                             48768321 122 -  48907691 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAT----ACTGCAGATTT-A--GAACT--GA-GATGG-A---AAAC-AAAG
i Erythrocebus_patas.Contig8                            I 1 I 1
s Eschrichtius_robustus.EscRob_flattened_line_685          313255 119 +    330699 GGTA------TTT-TC-AATA-CGAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAG----ACTACGGATTT-A--GAAAT--GA-CTTGG-A---AA----TAT
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             59685 119 +     89355 GGTA------TTT-TC-AATA-CGAGAATGAATGTA-TCT-TTGTAAGGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--AACTTTGATAC----ACTACAGATTT-A--GAAAT--GA-CTTGG-A---AA----TAA
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              2751 122 +     13586 GGCA------CTT-TC-AATA-CCAGAATGAATATA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               2686 122 -      6809 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--TC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             9162 122 +     36558 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             5476 122 +     60246 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 8959 122 +    109717 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               13338 122 +     16540 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                13614 122 +     27497 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           16080 122 +     26808 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                30804 122 +     46535 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--TC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              13527 122 -     29447 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--TC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129890559 122 - 159252932 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACG--GA-CTTGG-A---AAAC-AAAG
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129277634 122 - 158578461 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACG--GA-CTTGG-A---AAAC-AAAG
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 18769 122 +     52776 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACG--GA-CTTGG-A---AAAC-AAAG
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13890497  79 -  19261668 GGCA------CTTTTC-AATA-CCAGAATGAATATA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-CT-AACA-TCCA-TCGCAT-AATGA-----GAG--------------------------------------------------------
i Fukomys_damarensis.KN123630.1                         C 0 I 37
s Galago_moholi.ctg555                                     208670 122 -    847004 GGCA------CTT-TC-AATA-CCAGAGCGAATGTA-TCT-CTGTGAAGACAG-C-AT-TT--ATCTA--CC-GT-AACA-TACC-AAGCAT-AATGAAGA--GACTTGGATTC----ACTGCAGATTC-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           11051 122 -     43889 GGCA------CTT-TC-AATA-CCAGAGCGAATGTA-TCT-CTGTGAAGACAG-C-AT-TT--ATCTA--CC-GT-AACA-TACC-AAGCAT-AATGAAGA--GACTTGGATTC----ACTGCAGATTC-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           8115 122 +     27357 GGCA------CTT-TC-AATA-CCAGAGCGAATGTA-TCT-TTGTGAAGACAG-C-AT-TT--ATCTA--CC-GT-AACA-TACC-AAGCAT-AATGAAGA--GACTTGGATTC----ACTGCAGACTC-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               154029 122 +    324696 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-ACCA-TCCA-AAGCTT-AATGAGGA--GACTTTGATAC----ACTACAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    179229 122 -    189561 GGCA------TTT-TC-AATA-GGAGAATGAATGCA-TTT-TTGTGAAGATAC-C-AT-TT--TTCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAAGA--GACTTTGATAC----ACTGCAGATTT-A--GAAAA--GA-CTTGG-A---AAAC-AAAG
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           10436  81 -     18683 GGCA------CTT-TC-AATA-CCAGAATGAATGTG-TCT-TTGTGAAGACAC-C-AT-TT--ATCTA--CC-CT-AACA-TCCA-AAGTAT-AATGAGGA--GAC--------------------------------------------------------
i Glis_glis.GliGli_scaffold_79770                       C 0 I 41
s Gorilla_beringei.k141_111300                               3651 123 -     14630 GGAA------CTT-TC-AGTA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCCA--CC-AT-AATA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-AATGG-A---AAACAAAAG
i Gorilla_beringei.k141_111300                          I 743 T 742
s Gorilla_gorilla.LT578340.1                            119650750 123 - 195582420 GGAA------CTT-TC-AGTA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCCA--CC-AT-AATA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--Gaact--ga-aatgg-a---aaacaaaag
i Gorilla_gorilla.LT578340.1                            I 743 T 742
s Graphiurus_murinus.GraMur_scaffold_4493                   74965  81 +    118900 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGACAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GAC--------------------------------------------------------
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 I 41
s Hapalemur_alaotrensis.k141_1198205                         3311 122 +      3980 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             25786 122 +     26611 GGCA------CTT-TC-AATA-CCAGAGTGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             3248 122 +     56096 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAT-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        26523 122 -     42470 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        43117 122 -     54384 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              14804 122 +     53719 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAATG--AA-CTTGG-A---AAAC-AAAG
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                25728 122 -     91191 GGCA------TTT-TC-AATA-GGAGAATGAATGCA-TCT-TTGTGAAGATAC-C-AT-TT--TTCTA--CC-GT-AACA-TCCA-AAGCAT-AATGAAGA--GACTTTGATAC----ACTGCAGATTT-A--GAAAT--GA-CTTGG-A---AAAC-AAAG
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2548878  82 +  31725842 GGTA------CTTTTC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-TCACAT-AATGAGGA--GAC--------------------------------------------------------
i Heterocephalus_glaber.JH602058.1                      C 0 I 39
s Heterohyrax_brucei.HetBruBak_scaffold_25354               54282 122 +     73687 GGCA------CTT-TC-AATA-CCCAAATGAATATA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--TG-AT-AACA-TCCA-AAGCAT-AATGATGA--GACTTTGAAAT----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              145293 122 +    277961 GGCA------TTT-TC-AATA-CAAGAATGAATGTA-TCT-TTTTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCGGATTT-A--GAAAT--GA-CTTGG-A---AAAC-AAAG
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      276632 122 -    477199 GGCA------TTT-TC-AATA-CCAGAATGAATATA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-CTTGG-A---AAAC-AAAG
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              5790 122 -      9143 GGCA------TTT-TC-AATA-CCAGAATGAATATA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-CTTGG-A---AAAC-AAAG
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg2405                                   13683 122 -     15084 GGAA------GTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-ATTGG-A---AAAT-AAAG
i Hoolock_leuconedys.ctg2405                               I 943 T 517
s Hyaena_hyaena.HyaHya_flattened_line_20729                 13858 121 -     67322 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAATG--GA-CG-GG-A---AAAC-AAAG
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16793  84 -    119109 GGCA------CTTTTC-AATA-CCAGAATGAATATA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--TG-AT-AACA-TCCA-TTGCAT-AATGAGGAAACAC--------------------------------------------------------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 I 39
s Hylobates_abbotti.k141_493872                              2727 121 +      5897 GGCA------CTT-TC-AATA-CCAGAATG-ATGTA-TCT-TTGTGAAGATGC-C-AT-TT--ATGTAG--C-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTGCGATAC----ACTGCAGATTT-A--GAACT--GA-GGTGG-A---AAAG-AAAA
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_1485652                              1147 122 -      1697 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATGC-C-AT-TT--ATGTAG--C-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTGTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAA
i Hylobates_agilis.k141_1485652                         C 0 C 0
s Hylobates_klossii.k141_466549                              9171 122 +     11537 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATGC-C-AT-TT--ATGTAG--C-AT-AACA-TCCA-AAGCGT-AATGAGGA--GATTGTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAA
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14622272 122 -  25970782 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATGC-C-AT-TT--ATGTAG--C-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTGTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAA
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1133650                            2161 122 -      2775 GGCA------CTT-TC-AATA-ACAGAATGAATGTA-TCT-TTGTGAAGATGC-C-AT-TT--ATGTAG--C-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTGTGATAC----ACTGTGGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAA
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             30764 123 -     60944 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATGC-C-AT-TT--ATGTAG--C-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTGTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGGGA---AAAC-AAAA
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     3928  82 +     22540 GGCA------CTTTAC-AATA-CCAGAATAAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-TCGCAT-AATGAGGA--GAC--------------------------------------------------------
i Hystrix_cristata.HysCri_scaffold_50788                C 0 I 39
s Ictidomys_tridecemlineatus.JH393315.1                   7123794  81 +  13083262 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GAC--------------------------------------------------------
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 I 41
s Indri_indri.k141_1884019                                    987 122 -      2196 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAA-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAAATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Indri_indri.k141_1884019                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               7042 119 +     17520 GGTA------TTT-TC-AATA-TGAGAATGAATGTG-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GGCTTTGATAC----ACTACAGATTT-A--GAAAT--GA-CTTGG-A---AA----TAA
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8563337  81 +  11848649 GGCA------TTT-TC-AATA-GCAGAGTGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACG-TCCG-AAGCAT-AATGAGGA--GGC--------------------------------------------------------
i Jaculus_jaculus.JH725517.1                            C 0 I 39
s Kogia_breviceps.KogBre_flattened_line_35920               21873 114 +     37189 GGTA------TTT-TC-AATA-TGAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT---CA-TCCA-AAGCAT-AATG---A--GACTCTGATAC----ACTACAGATTT-A--GAAAT--GA-CTTGG-A---AA----TAA
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          47771 122 -    147782 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAAGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Lagothrix_lagothricha.k141_12968                      I 1 I 1
s Lasiurus_borealis.LasBor_scaffold_5102                   111782 122 -    115756 GGCA------TTT-TT-AATA-CGAGGATGAACATA-TCT-TTGTGAAGATAC-A-ATTTT--ATCTA--CC-AC-AACA-TCCA-AAGCAT-AATAAGGA--GACTTTGGTAC----TCTGAAGATTT-A--GAACC--GA-CTTGA-A----AAC-AAAG
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258404806 122 - 285822530 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCG-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        21678 122 +     39228 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            51051 122 +     63517 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        76293 122 +    116806 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAACAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     29316 122 -     33031 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3083572 122 -   3498232 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-CTTGG-A---AAAC-AAAG
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    10782 122 +     22452 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AGCA-TCCA-GAGCAT-AATGAAGA--GACATTGATAC----ACAGCCGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            134200 119 +   3060487 GGTA------TTT-TC-AATA-TGAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTACGGATTT-A--GAAAT--GA-CTTGG-A---AC----TAA
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19245405 121 +  19376315 -GCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGAA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Lophocebus_aterrimus.ctg55                            I 1 I 1
s Loris_lydekkerianus.k141_550999                            8418 125 +     84689 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGACGG-C-AT-TT--ATCTA--CC-AT-AACA-TACC-AAGCAT-AATGAAGA--GACTTGGATAC----TCTGCAGATTC-A--GAACG--GA-GTTGG-AGGAAAAC-AAAG
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3776169 125 +   6799190 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGACGG-C-AT-TT--ATCTA--CC-AT-AACA-TACC-AAGCAT-AATGAAGA--GACTTGGATAC----TCTGCAGATTC-A--GAACG--GA-GTTGG-AGGAAAAC-AAAG
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20589059 122 -  62548349 GGCA------CTT-TC-AATG-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-A-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGAAAC----ATTGCAGATTT-A--GAATT--GA-GTTGG-A---AAAC-AAAG
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11084933 122 +  39895028 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-CTTGG-A---AAAC-AAAG
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             17090 122 +     74745 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GATGG-A---AAAC-AAAG
i Macaca_arctoides.k141_2201161                         I 1 I 1
s Macaca_assamensis.Contig65                             12703596 122 +  12821369 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GATGG-A---AAAC-AAAG
i Macaca_assamensis.Contig65                            I 1 I 1
s Macaca_cyclopis.k119_1168412                               5692 122 +      6569 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GATGG-A---AAAC-AAAG
i Macaca_cyclopis.k119_1168412                          I 1 C 0
s Macaca_fascicularis.k141_155037                           43994 122 +     63263 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GATGG-A---AAAC-AAAG
i Macaca_fascicularis.k141_155037                       I 1 I 1
s Macaca_fuscata.k119_925451                                   10 122 +     10231 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GATGG-A---AAAC-AAAG
i Macaca_fuscata.k119_925451                            n 1 I 26
s Macaca_leonina.k141_3421209                                2143 122 +      3017 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGCTAC----ACTGCAGATTT-A--GAACT--GA-GATGG-A---AAAC-AAAG
i Macaca_leonina.k141_3421209                           I 1 C 0
s Macaca_maura.k141_251854                                  43755 122 -     79256 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196032673 122 + 196197964 GGCG------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GATGG-A---AAAC-AAAG
i Macaca_mulatta.NC_041755.1                            I 1 I 1
s Macaca_nemestrina.KQ004885.1                           11442779 122 +  11645122 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGCTAC----ACTGCAGATTT-A--GAACT--GA-GATGG-A---AAAC-AAAG
i Macaca_nemestrina.KQ004885.1                          I 1 I 1
s Macaca_nigra.k141_282495                                   2702 122 -     46448 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                2533 122 -      3617 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GATGG-A---AAAC-AAAG
i Macaca_radiata.k141_1580474                           I 1 C 0
s Macaca_siberu.k141_741907                                 12865 122 -     55006 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGCTAC----ACTGCAGATTT-A--GAACT--GA-GATGG-A---AAAC-AAAG
i Macaca_siberu.k141_741907                             I 1 I 1
s Macaca_silenus.Contig12                                43837902 122 +  43892939 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GATGG-A---AAAC-AAAG
i Macaca_silenus.Contig12                               I 1 I 1
s Macaca_thibetana.k99_116940                                5124 122 -      5978 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GATGG-A---AAAC-AAAG
i Macaca_thibetana.k99_116940                           I 1 C 0
s Macaca_tonkeana.k141_2870633                               2707 122 -     27140 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                699818 122 +    802869 GGTG------TTT-TT-AATT-CCAGAATGAATATA-TCT-TTCTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-CTTGA-A---AAAC-AAAG
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43434565  80 -  43563597 -GCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGAA--GAT--------------------------------------------------------
i Mandrillus_leucophaeus.scaffold125                    I 1 I 42
s Mandrillus_sphinx.Contig144                             4447391  80 -   4543643 -GCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGAA--GAT--------------------------------------------------------
i Mandrillus_sphinx.Contig144                           I 1 I 42
s Manis_javanica.JSZB01003966.1                            144310  64 +    252755 GGCA------TTT-TC-AATA-TCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACG-TCCA-----------------------------------------------------------------------------
i Manis_javanica.JSZB01003966.1                         C 0 I 58
s Manis_pentadactyla.KN017078.1                             34384  64 +     58827 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACG-TCCA-----------------------------------------------------------------------------
i Manis_pentadactyla.KN017078.1                         C 0 I 56
s Marmota_marmota.CZRN01000005.1                         36871634  81 +  64221397 GGCA------CTT-TC-AATA-CCAGAACGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GAC--------------------------------------------------------
i Marmota_marmota.CZRN01000005.1                        C 0 I 41
s Megaderma_lyra.MegLyr_scaffold_3562                       62473 122 -    234502 GGCA------TTT-TC-AATA-CCACAATGAATATA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAACAT-AATGAGGA--GACTTGGATAC----ATTACAGATTT-A--GAACT--GA-CTTGA-A---AAAC-AAAG
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_142001             175 122 -      2090 GGCA------TTT-TC-AATG-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-CTTGG-A---AAAC-AAAG
i Mellivora_capensis.MelCap_flattened_line_142001       N 0 T 104
s Meriones_unguiculatus.MerUng_scaffold_52233                9744  81 +     15977 GGCA------CTT-TC-AATA-GTAGAATGAATGTA-TCT-TTGTGAAGTTAC-C-AT-TT--ATCTG--CT-GT-AACA-CCCA-AAGCAT-CATGGCTA--GAC--------------------------------------------------------
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 I 41
s Mesocricetus_auratus.KB708139.1                         1044528  80 -  26018355 GGCA------TTT-TC-AATA-ACA-AACGAATGTA-TCT-TTGTGAAGATAG-C-AT-TT--ATCAA--CT-AT-AACA-CCCA-AAACAT-AATGGCTA--GAT--------------------------------------------------------
i Mesocricetus_auratus.KB708139.1                       C 0 I 41
s Mesoplodon_bidens.MesBid_scaffold_183284                   1912 119 +      2166 GGTA------TTT-TC-AATA-CGAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AGCA-TCCA-AAGCAT-AATGAGGA--GACTTTGACAC----ACTACGGATTT-A--GAAAT--GA-CTTGG-A---AA----TAA
i Mesoplodon_bidens.MesBid_scaffold_183284              C 0 C 0
s Microcebus_murinus.CM007691.1                          16507926 122 +  47401472 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-A-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  29203 114 -     48017 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATGC-C-AT-TT--ATCTA--CC-AT-AACA-ACCA-AAGCAT-AATGA-----GACTTTGT--------CGGCTGATTT-A--GAACT--GA-GTTGG-A----AAC-AAAG
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               20897 119 -     32043 GGCA------TTT-TC-AATA-CCAAACTGAATATA-TCT-TTGTGAGGATAC-C-AT-TT--ATCTA--CC-AT-AGCG-TCCG-AAGCAT-AATG---A--GACTTTGATAC----ACTGCCGATTT-A--GGACT--GA-CTGGA-A---AAAT-AAAG
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22817646  80 -  98408828 GGCA------TTT-TC-AATA-GAA-AATGAATGTA-TCT-TTGTGAAGATAG-C-AT-TT--ATCTA--CT-AT-AACA-CCCA-AAGCAT-AATGACTA--GAC--------------------------------------------------------
i Microtus_ochrogaster.CM001673.1                       C 0 I 41
s Miniopterus_natalensis.LDJU01000022.1                   8207658  64 +  10048721 GGCA------TTT-TC-AGTA-CGAGAATGAATATA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AC-AACA-TCCA-----------------------------------------------------------------------------
i Miniopterus_natalensis.LDJU01000022.1                 C 0 I 54
s Miniopterus_schreibersii.MinSch_scaffold_24116            32329  64 +     45743 GGCA------TTT-TC-AGTA-CGAGAATGAATATA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AC-AACA-TCCG-----------------------------------------------------------------------------
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 I 54
s Miopithecus_ogouensis.k141_2666161                        33223 122 +     34273 GGCA------CTT-TC-AATA-CCAGAATGAATGCA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GATGG-A---AAAC-AAAG
i Miopithecus_ogouensis.k141_2666161                    I 1 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         8877 122 -    104932 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AATA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-CTTGG-A---AAAC-AAAG
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     3331 122 +      8497 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-A-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 144637 119 +    154973 GGTA------TTT-TC-AATA-TGAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGAA--GACTTTGATAC----ACTACGGATTT-A--GAAAT--GA-CTTGG-A---AA----TAA
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                159407 119 +    265003 GGCA------TTT-TC-AATA-CCAGACTGAATATA-TCT-GTGTGAAGATAC-C-AT-TC--ATCTA--CC-AT-AACA-TCCG-AAGCAT-AATG---A--GACTTTGATAC----GCCGCAGATTT-A--GAACT--AA-GTTGA-A---AAAT-AAAG
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 2816 122 -      4346 GGCA------TTT-TC-AATA-GGAGAATGAATGCA-TCT-TTGTGAAGATAT-C-AT-TT--TTCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAAGA--GACTTTGATAC----ACTGCAGATTT-A--GAAAT--GA-CTTGG-A---AAAC-AAAG
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  142499  81 -    168139 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GAC--------------------------------------------------------
i Mungos_mungo.MunMun_flattened_line_8729               C 0 I 39
s Murina_feae.MurFea_scaffold_2254                          17300 120 -    100666 GGCA------TTT-TC-AATA-CAAGAATGAGAATA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AG--ACA-TCCA-AAGCAT-AATAAGGA--GACTTTGATAC----TCTGCGGATTT-A--GAACC--GA-CTTGA-A----AAC-AAAG
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70764158  81 +  92629107 GGCA------TTT-TC-AATA-GCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CT-AT-AACA-CCCA-AAGCAT-AATGGCTA--GAC--------------------------------------------------------
i Mus_caroli.LT608236.1                                 C 0 I 41
s Mus_musculus.chr16                                     75487195  81 +  98207768 GGCA------TTT-TC-AATA-GCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CT-AT-AACA-CCCA-AAGCAT-AATGGCTA--GAC--------------------------------------------------------
i Mus_musculus.chr16                                    C 0 I 41
s Mus_pahari.LT608305.1                                  67553366  81 +  89017189 GGCA------TTT-TC-AATA-GCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CT-AT-AACA-CCCA-AAGCAT-AATGGCTA--GAC--------------------------------------------------------
i Mus_pahari.LT608305.1                                 C 0 I 41
s Mus_spretus.CM004110.1                                 74328376  81 +  97876770 GGCA------TTT-TC-AATA-GCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CT-AT-AACA-CCCA-AAGCAT-AATGGCTA--GAC--------------------------------------------------------
i Mus_spretus.CM004110.1                                C 0 I 41
s Muscardinus_avellanarius.MusAve_scaffold_9643              8918  82 +     98495 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGACACCC-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GCG--------------------------------------------------------
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 I 41
s Mustela_putorius.JH417978.1                             4421742 122 -  28371801 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-CTTGG-A---AAAC-AAAG
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     87870  84 -    117718 GGCA------CTTTTC-AATA-CCAGAATGAATGGA-TCT-TTGTGAAGATAC-C-AT-TC--ATCTA--CC-AT-AACA-TCCA-CTGCGT-GATGAGGAGAGAC--------------------------------------------------------
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 I 39
s Myotis_brandtii.KE161952.1                               965620 120 +   8389877 GGCA------TTT-TC-AATA-CGAGGATGAATATA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AG--ACA-TCCA-AAGCAT-AATAAGGA--GACTTTGATAC----TCTGCGGATTT-A--GAACC--AA-CTTGA-A----AAC-AAAG
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5017311 120 +   6462685 GGCA------TTT-TC-AATA-CGAGGATGAATATA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AG--ACA-TCCA-AAGCAT-AATAAGGA--GACTTTGATAC----TCTGCGGATTT-A--GAACC--GA-CTTGA-A----AAC-AAAG
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3463207 120 -   3747815 GGCA------TTT-TC-AATA-CGAGGATGAATATA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AG--ACA-TCCA-AAGCAT-AATAAGGA--GACTTTGATAC----TCTGCGGATTT-A--GAACC--GA-CTTGA-A----AAC-AAAG
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         8402 120 +     66751 GGCA------TTT-TC-AATA-CGAGGATGAATATA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AG--ACA-TCCA-AAGCAT-AATAAGGA--GACTTTGATAC----TCTGCGGATTT-A--GAACC--AA-CTTGA-A----AAC-AAAG
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3276 122 -      8794 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGGAGATAC-C-AT-TT--ATCTG--CC-AT-AACA-TCCA-AAACAT-AATGAGGA--GACATTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            108254  81 +    362372 GGCA------TTT-TC-AATA-GCAGGATGAATGTA-TCA-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AACCAT-AATGGGGA--AAC--------------------------------------------------------
i Nannospalax_galili.KL201303.1                         C 0 I 41
s Nasalis_larvatus.k141_153429                               5602 122 +     48152 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-GT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GATGG-A---AAAC-AAAG
i Nasalis_larvatus.k141_153429                          I 1 I 1
s Neomonachus_schauinslandi.NINY01007774.1                4482476 122 -  14209539 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-CTTGG-A---AAAC-AAAG
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3949249 119 -   4490290 GGTA------TTT-TC-AATA-TGAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTACGGATTT-A--GAAAT--ga-cttgg-a---aa----taa
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  47524 118 +     94413 GGCA------TTT-TC-AATA-CCAGACCGAATATA-TCT-TTGTGAGGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCTG-AAGCAT-AATA---A--GACTTTGATAT----GCTGCAGATTT-A--GAACT--GA-CTTAA-A---AAAT-AAA-
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1439838                           1210 122 +      3718 ggaa------ctt-tc-aata-ccagaatgaatgta-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AC-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-ATTGG-A---AAAT-AAAG
i Nomascus_annamensis.k141_1439838                      I 737 T 735
s Nomascus_concolor.k141_49591                               1433 122 +      2014 ggaa------ctt-tc-aata-ccagaatgaatgta-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AC-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-ATTGG-A---AAAT-AAAG
i Nomascus_concolor.k141_49591                          I 737 T 735
s Nomascus_gabriellae.k141_642452                             358 122 +      2851 ggaa------ctt-tc-aata-ccagaatgaatgta-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATGTTGATAC----ACTGCAGATTT-A--GAACT--AA-ATTGG-A---AAAT-AAAG
i Nomascus_gabriellae.k141_642452                       n 122 T 438
s Nomascus_siki_b.tarseq_80                             23273 122 -  18771707 ggaa------ctt-tc-aata-ccagaatgaatgta-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATGTTGATAC----ACTGCAGATTT-A--GAACT--GA-ATTGG-A---AAAT-AAAG
i Nomascus_siki_b.tarseq_80                         I 773 T 771
s Nomascus_siki_a.k141_595747                                   986 122 +      4512 ggaa------ctt-tc-aata-ccagaatgaatgta-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-ATTGG-A---AAAT-AAAG
i Nomascus_siki_a.k141_595747                             n 122 T 702
s Nyctereutes_procyonoides.CAJHUB010000786.1                27926 122 +   3668941 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-CTTGG-A---AAAC-AAAG
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65564764 125 -  95554990 GGCA------CTT-TC-AATA-CCAGAACGAATGTA-TCT-TTGTGAAGACGG-C-AT-TT--ATCTA--CC-AT-AACA-TACC-AAGCAT-AATGAAGA--GACTTGGATAC----TCTGCAGATTG-A--GAACG--GA-GTTGG-AGGAAAAC-AAAG
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            1609 125 +      6470 GGCA------CTT-TC-AATA-CCAGAACGAATGTA-TCT-TTGTGAAGACGG-C-AT-TT--ATCTA--CC-AT-AACA-TACC-AAGCAT-AATGAAGA--GACTTGGATAC----TCTGCAGATTG-A--GAACG--GA-GTTGG-AGGAAAAC-AAAG
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65667134 125 +  89412551 GGCA------CTT-TC-AATA-CCAGAACGAATGTA-TCT-TTGTGAAGACGG-C-AT-TT--ATCTA--CC-AT-AACA-TACC-AAGCAT-AATGAAGA--GACTTGGATAC----TCTGCAGATTG-A--GAACG--GA-GTTGG-AGGAAAAC-AAAG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4993757 120 -  23139505 GGCA------CTT-TC-AAAA-CCAGAATGAATGAA-TCC-TTGTGAAGATAA-C-AT-TT--ATCTA--CC-GT-AACA-TCCA-AAGAAT-AATGAAGA--GACATGGATGC----ACTTCAGATTG-A--GAGC----A-GTTGG-A---AAAC-AAAG
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3683342  84 +  10294119 GGCA------CTTTTC-AATA-CCAGAATGAATGGA-TCT-TTGTGAAGATCC-T-AT-TT--ATCTA--CC-AT-AACA-TGCC-TTGCAT-AATGAGGAGAGAC--------------------------------------------------------
i Octodon_degus.JH651621.1                              C 0 I 39
s Odobenus_rosmarus.KB229369.1                             677132 122 -   3126709 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-CTTGG-A---AAAC-AAAG
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1077944 122 +   1425656 GGCA------TTT-TC-AATA-GGAGAATGAATGCA-TCT-TTGTGAAGATAC-C-AT-TT--TTCTA--CC-AT-AGCA-TCCT-AAGCAT-AATGAAGA--GACTTTGATAC----ACTGCAGTTTT-A--GAAAT--GA-CTTGG-A---AAAC-AAAG
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         35099 122 +     78940 GGCA------TTT-TC-AATA-GGAGAATGAATGCA-TCT-TTGTGAAGATAC-C-AT-TT--TTCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAAGA--GACTTTGATAC----ACTGCAGATTT-A--GAAAA--GA-CTTGG-A---AAAC-AAAG
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  122921  80 +    145789 GGCA------TTT-TC-AATA-GAA-AATGAATGTA-TCT-TTGTGAAGATAG-C-AT-TT--ATCTA--CT-AT-AACA-CCCA-AAGCAT-AATGGCTA--GAG--------------------------------------------------------
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 I 40
s Onychomys_torridus.OnyTor_scaffold_12578                  34676  80 +     62360 GGCA------TTT-TC-AATA-GCA-AATGAATGTA-TCT-TTGTGAAGATAG-C-AT-TT--ATCTA--CT-AC-AACA-CCCA-AAGCAT-AATGGCTA--GAC--------------------------------------------------------
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 I 41
s Orcinus_orca.KB316965.1                                 7222933 119 -   7562323 GGTA------TTT-TC-AATA-TGAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTACGGATTT-A--GAAAT--ga-cttgg-a---aa----taa
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              41315 122 -     66828 GGCA------CTT-TC-AATA-CCAAAATGAATGTA-TCA-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGAG--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141873440 122 + 163896628 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AGCA-TCCA-GAGCAT-AATGAAGA--GACATTGATAC----ACAGCCGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      305265 122 -    505867 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-CTTGG-A---AAAC-AAAG
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       36758 122 +     38679 GGCA------CTT-TC-AATA-CCAGAGCGAATGTA-TCT-TTGTGAAGACAG-C-AT-TT--ATCTA--CC-GT-AACA-TACC-AAGCAT-AATGAAGA--GACTTGGATTC----ACTGCAGATTC-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18006200 122 -  38779656 GGCA------CTT-TC-AATA-CCAGAGCGAATGTA-TCT-TTGTGAAGACAG-C-AT-TT--ATCTA--CC-GT-AACA-TACC-AAGCAT-AATGAAGA--GACTTGGATTC----ACTGCAGATTC-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134075521 122 - 275406953 GGCA------TTT-TC-AATA-GGAGAATGAATGCA-TCT-TTGTGAAGATAC-C-AT-TT--TTCTA--CC-GT-AACA-TCCA-AAGCAT-AATGAAGA--GACTTTGATAC----ACTGCAGATTT-A--GAAAT--GA-CTTGG-A---AAAC-AAAG
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      76735 122 +    140051 GGCA------TTT-TC-AATA-GGAGAATGAATGCA-TCT-TTGTGAAGATAC-C-AT-TT--TTCTA--CC-GT-AACA-TCCA-AAGCAT-AATGAAGA--GACTTTGATAC----ACTGCAGATTT-A--GAAAT--GA-CTTGG-A---AAAC-AAAG
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127572253 122 - 205426864 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATGTA--CC-AT-AACA-TCCA-AAGCAT-AATAAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAA
i Pan_paniscus.CM003386.1                               I 1 I 1
s Pan_troglodytes.CM009241.2                            120149406 122 - 196562556 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATGTA--CC-AT-AACA-TCCA-AAGCAT-AATAAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAA
i Pan_troglodytes.CM009241.2                            I 1 I 1
s Panthera_onca.PanOnc_flattened_line_1615                  31960 122 +    295523 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACG--GA-CTTGG-A---AAAC-AAAG
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3635693 122 +  18214204 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACG--GA-CTTGG-A---AAAC-AAAG
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5025341 122 -   6340057 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACG--GA-CTTGG-A---AAAC-AAAG
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1064382 122 -   1292953 GGCA------TTT-TC-AATA-GGAGAATGAATGCA-TCT-TTGTGAAGATAC-C-AT-TT--TTCTA--CC-GT-AACA-TCCA-AAGCAT-AATGAAGA--GACTTTGATAC----ACTGCAGATTT-A--GAAAT--GA-CTTGG-A---AAAC-AAAG
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188153349 121 - 188283584 -GCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGAA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Papio_anubis.CM001492.2                               I 1 I 1
s Papio_cynocephalus.k141_386926                            49561 121 +     76494 -GCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGAA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Papio_cynocephalus.k141_386926                        I 1 C 0
s Papio_hamadryas.Contig15                               47510746 121 +  47705337 -GCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGAA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Papio_hamadryas.Contig15                              I 1 I 1
s Papio_kindae.k141_5458022                                 64723 121 -    104429 -GCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGAA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Papio_kindae.k141_5458022                             I 1 I 1
s Papio_papio.k141_3561084                                  14514 121 -     29451 -GCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGAA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Papio_papio.k141_3561084                              I 1 C 0
s Papio_ursinus.k141_3762866                                34917 121 +     35859 -GCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGAA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Papio_ursinus.k141_3762866                            I 1 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113260 122 -    135482 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAAGA--GA-TGTGG-A---AAAC-AAAG
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           2811 122 -     23713 GGCA------CTT-GC-AATA-CCAGAACGAATGTA-TCT-TTGTGAAGACAG-C-AT-TT--ATCTA--CC-AT-AACA-TACC-AAGCAT-AATAAAGA--GACTTGGATAC----ACTGCAGATTC-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            22110 122 -     27972 GGCA------CTT-GC-AATA-CCAGAACGAATGTA-TCT-TTGTGAAGACAG-C-AT-TT--ATCTA--CC-AT-AACA-TACC-AAGCAT-AATAAAGA--GACTTGGATAC----ACTGCAGATTC-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      40729  81 -     45160 GGCA------CTT-TC-AATA-CCAGAACGAATATA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACC-TCCA-AAGCAT-AATGAGGA--GAC--------------------------------------------------------
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 I 39
s Peromyscus_maniculatus.KI615518.1                       4947852  80 -   8017169 GGCA------TTT-TC-AATA-GTG-AATGAATGTA-TCT-TTGTGAAGATAG-C-AT-TT--ATCTA--CT-AT-AACA-CCCA-GAGCAT-AATGGCTA--GAC--------------------------------------------------------
i Peromyscus_maniculatus.KI615518.1                     C 0 I 41
s Petromus_typicus.PetTyp_scaffold_33007                    10070  49 -     36578 -----------------------------------------TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-TGGCAT-AATGAGGA--T----------------------------------------------------------
i Petromus_typicus.PetTyp_scaffold_33007                I 30 I 35
s Phocoena_phocoena.PhoPho_flattened_line_11948            119550 119 -    122454 GGTA------TTT-TC-AATA-TGAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-GT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTACGGATTT-A--GAAAT--GA-CTTGG-A---AA----TAA
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           2606 122 -      3310 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATGC----ACTGCAGATTT-A--GAACT--GA-GATGG-A---AAAC-AAAG
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       22511 122 -     82327 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATAAGGA--GATTTTGATGC----ACTGCAGATTT-A--GAACT--GA-GATGG-A---AAAC-AAAG
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           19258 122 +     19957 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATGC----ACTGCAGATTT-A--GAACT--GA-GATGG-A---AAAC-AAAG
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26737272 122 +  26888534 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATGC----ACTGCAGATTT-A--GAACT--GA-GATGG-A---AAAC-AAAG
i Piliocolobus_tephrosceles.PDMG02000036.1              I 1 I 1
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            95070 121 +    112873 GGCA------TTT-TC-AATA-CGATGATGAATATA-TCT-CTGTGAAGATAC-C-AT-TT--ATCTA--CC-AC-AACA-TCCA-AAGCAT-AATAAGGA--GACTTTTATAC----TCTGCAGATTT-A--GAATC--GA-CTTGA-A----AAC-AAAG
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             41255 121 -     61926 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC-A-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTAGG-A---AAAC-AAAG
i Pithecia_albicans.k141_991845                         I 1 I 1
s Pithecia_chrysocephala.k141_159118                        22684 121 +     78826 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TTT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC-A-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTAGG-A---AAAC-AAAG
i Pithecia_chrysocephala.k141_159118                    I 1 I 1
s Pithecia_hirsuta.k141_1152968                              6635 121 -     15800 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC-A-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTAGG-A---AAAC-AAAG
i Pithecia_hirsuta.k141_1152968                         I 1 I 1
s Pithecia_mittermeieri.k141_2119203                         9833 121 -     16101 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC-A-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTAGG-A---AAAC-AAAG
i Pithecia_mittermeieri.k141_2119203                    I 1 I 1
s Pithecia_pissinattii.k141_1102319                          3142 121 +      9673 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC-A-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTAGG-A---AAAC-AAAG
i Pithecia_pissinattii.k141_1102319                     I 1 I 1
s Pithecia_pithecia.tarseq_313                           13472136 121 -  19735023 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCC-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC-A-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTAGG-A---AAAC-AAAG
i Pithecia_pithecia.tarseq_313                          I 1 I 1
s Pithecia_vanzolinii.k141_831006                           11044 121 -     31692 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC-A-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTAGG-A---AAAC-AAAG
i Pithecia_vanzolinii.k141_831006                       I 1 I 1
s Platanista_gangetica.PlaMin_flattened_line_72990           3618 119 +     21690 GGTA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--GTCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--TGCTTTGATAC----ACTATGGATTT-A--GAAAT--TA-CTTGG-A---AA----TAA
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       20518  79 +     44506 --------------------------------------------------------AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Plecturocebus_bernhardi.k141_959214                   I 44 I 1
s Plecturocebus_brunneus.k141_498086                        20728  79 +     67491 --------------------------------------------------------AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Plecturocebus_brunneus.k141_498086                    I 44 I 1
s Plecturocebus_caligatus.k141_2539816                      10969  79 -     98129 --------------------------------------------------------AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Plecturocebus_caligatus.k141_2539816                  I 44 I 1
s Plecturocebus_cinerascens.k141_744510                     20574  79 +    147771 --------------------------------------------------------AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Plecturocebus_cinerascens.k141_744510                 I 44 I 1
s Plecturocebus_cupreus.k141_1223294                        20824  79 -     23762 --------------------------------------------------------AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Plecturocebus_cupreus.k141_1223294                    I 44 I 1
s Plecturocebus_dubius.k141_3565563                          1290  79 -     55515 --------------------------------------------------------AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Plecturocebus_dubius.k141_3565563                     I 44 I 1
s Plecturocebus_grovesi.k141_242819                         20643  79 +    152463 --------------------------------------------------------AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Plecturocebus_grovesi.k141_242819                     I 44 I 1
s Plecturocebus_hoffmannsi.k141_1595076                      7403  79 +      8943 --------------------------------------------------------AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Plecturocebus_hoffmannsi.k141_1595076                 I 44 I 1
s Plecturocebus_miltoni.k141_841561                         10363  79 +    134592 --------------------------------------------------------AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Plecturocebus_miltoni.k141_841561                     I 44 I 1
s Plecturocebus_moloch.k141_890597                          20953  79 -     75465 --------------------------------------------------------AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Plecturocebus_moloch.k141_890597                      I 44 I 1
s Pongo_abelii.NDHI03003816.1                              184798 121 -    373494 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTG-A--GAACT--GA-GTTGG-A---AAAC--AAA
i Pongo_abelii.NDHI03003816.1                           I 1 I 1
s Pongo_pygmaeus.ctg62                                   19804706 121 +  19899266 -GCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTG-A--GAACT--GA-GTTGG-A---AAAC-AAAA
i Pongo_pygmaeus.ctg62                                  I 2 I 740
s Presbytis_comata.k141_672698                               2840 122 -     15069 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GATGG-A---AAAC-AAAG
i Presbytis_comata.k141_672698                          I 1 I 1
s Presbytis_mitrata.k141_860013                              2974 122 +     14865 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGAA--GATTTTGATGC----ACTGCAGATTT-A--GAACT--GA-GATGG-A---AAAC-AAAG
i Presbytis_mitrata.k141_860013                         I 1 I 1
s Procavia_capensis.ProCapCap_scaffold_15315                74146 122 +     78963 GGCA------CTT-TC-AATA-CCCAAATGAATATA-TCT-TAGTGAAGATAC-C-AT-TT--ATCTA--TG-AT-AACA-TCCA-AAGCAT-AATGATGA--GACTTTGAAAT----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6846182 122 +  12164890 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    664799 122 -   2312742 NNNN------NNN-NN-NNNN-NNNNNNNNNNNNNN-NNN-NNNNNNNNNNNN-N-NN-NN--NNNNN--NN-NN-NNNN-NNNN-NNNNNN-NNNNNNNN--NNNNNNNNNNN----NNNNNNNNNNN-N--NNNNN--NN-NNNNN-N---NNNN-NNNN
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         1326 122 +     11805 GGCA------CTT-TC-AATA-CCAAAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           40660 122 +     52369 GGCA------CTT-TC-AATA-CCAAAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         33049 122 -     44753 GGCA------CTT-TC-AATA-CCAAAATGAATGTA-TCT-TTGTGGAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            14970 122 +     27322 GGCA------CTT-TC-AATA-CCAAAATGAATGTA-TCT-TTGTGGAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       14609 122 -     53241 GGCA------CTT-TC-AATA-CCAAAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         36881 122 -     48185 GGCA------CTT-TC-AATA-CCAAAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           31283  81 +     77221 GGCA------CTT-TC-AATA-GTAGAATGAATGTA-TCT-TTGTGAAGTTAC-C-AT-TT--ATCTA--CT-AT-AACA-CCCG-AAGCAT-CATGGCTA--GAc--------------------------------------------------------
i Psammomys_obesus.NESX01026517.1                       C 0 I 41
s Pteronotus_parnellii.KE867983.1                            2078 119 -     27784 GGCA------TTT-TC-AATA-CCAGACTGAATATA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-CACA-TCTG-AAGCAT-AATG---A--GACTTTGATAC----GCTGCAGATTT-A--GAACT--GA-CTTGA-A---AAAT-AAAG
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        243835 122 -    344369 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-CTTGG-A---AAAC-AAAG
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13244198 122 -  17261082 Ggca------ttt-tt-aatt-ctagaatGAATATA-TCT-TTCTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGTA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-CTTGA-A---AAAC-AAAG
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             602149 122 -   3946241 GGCA------TTT-TT-AATT-CCAGAATGAATATA-TCT-TTCTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-CTTGA-A---AAAC-AAAG
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131531923 122 - 161321710 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAT----ACTGCAGATTT-A--GAACG--GA-CTTGG-A---AAAC-AAAG
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             26969 122 +     56732 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GATGG-A---AAAC-AAAG
i Pygathrix_cinerea.k141_374971                         I 1 I 1
s Pygathrix_nigripes_b.ctg79                                 6803460 122 +   6970761 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GATGG-A---AAAC-AAAG
i Pygathrix_nigripes_b.ctg79                               I 1 I 1
s Pygathrix_nigripes_a.k141_101123                             2853 122 +     18040 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GATGG-A---AAAC-AAAG
i Pygathrix_nigripes_a.k141_101123                        I 1 I 1
s Rangifer_tarandus.RanTarSib_scaffold_24239                14022 122 +     68503 GGCA------TTT-TC-AATA-GGAGAATGAATGCA-TCT-TTGTGAAGATAC-C-AT-TT--TTCTA--CC-AT-AGCA-TCCT-AAGCAT-AATGAAGA--GACTTTGATAC----ACTGCAGTTTT-A--GAAAT--GA-CTTGG-A---AAAC-AAAG
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 I 1
s Rattus_norvegicus.chr11                                13913259  81 +  90463843 GGCA------TTT-TC-AATA-GCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CT-AT-CACA-CCCA-AAGCAT-AATGGCTA--GAC--------------------------------------------------------
i Rattus_norvegicus.chr11                               C 0 I 42
s Rhinolophus_sinicus.LVEH01000179.1                      1786019 122 +   2252614 GGCA------TCT-TC-AATA-CCAGAATGAATATA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-CTTGA-A---AAAC-AAAG
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           13406 122 -     14454 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GATGG-A---AAAC-AAAG
i Rhinopithecus_bieti.k119_102124                       I 1 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206374732 122 - 206558726 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GATGG-A---AAAC-AAAG
i Rhinopithecus_roxellana.NC_044549.1                   I 1 I 1
s Rhinopithecus_strykeri.ctg4                            44854897 113 -  45163003 -----------------AATA-CCAGAATGAATGTA-TTT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Rhinopithecus_strykeri.ctg4                           I 2518 T 2507
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                17491 122 +    109198 GGCA------TTT-TT-AATT-CCAGAATGAATATA-TCT-TTCTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACCGCAGATTT-A--GAACT--GA-CTTGA-A---AAAC-AAAG
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       5857  92 +     12214 ---------------------------------------T-TTGTGAAGATAC-C-AT-TT--TTCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAAGA--GACTTTGATAA----ACTGCAGATTT-A--GAAAT--GA-CTTGG-A----AAC-AAAG
i Saiga_tatarica.SaiTat_scaffold_82192                  I 28 C 0
s Saimiri_boliviensis.NW_024100938.1                     15670370 122 -  43202129 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCC-AAGCAT-AATGAGGA--GATTTTGATAC----CCTGCAGATTC-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Saimiri_boliviensis.NW_024100938.1                    I 1 I 1
s Saimiri_cassiquiarensis.k141_808270                        2236 122 +     34089 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCC-AAGCAT-AATGAGGA--GATTTTGATAC----CCTGCAGATTC-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Saimiri_cassiquiarensis.k141_808270                   I 1 I 1
s Saimiri_macrodon.k141_2087127                              2177 122 -     60842 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCC-AAGCAT-AATGAGGA--GATTTTGATAC----CCTGCAGATTC-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Saimiri_macrodon.k141_2087127                         I 1 I 1
s Saimiri_oerstedii.k141_841116                              2272 122 +     67014 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCC-AAGCAT-AATGAGGA--GATTTTGATAC----CCTGCAGATTC-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Saimiri_oerstedii.k141_841116                         I 1 I 1
s Saimiri_sciureus.k141_1947592                              2250 122 +     60816 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCC-AAGCAT-AATGAGGA--GATTTTGATAC----CCTGCAGATTC-A--AAACT--GA-GTTGG-A---AAAC-AAAG
i Saimiri_sciureus.k141_1947592                         I 1 I 1
s Saimiri_ustus.k141_1282476                                 2187 122 -     76454 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCC-AAGCAT-AATGAGGA--GATTTTGATAC----CCTGCAGATTC-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Saimiri_ustus.k141_1282476                            I 1 I 1
s Sapajus_apella.ctg10                                   17338921 122 -  30362882 GGCA------TGT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAT-C-AT-TT--ATCTA--CC-AA-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----CCTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-CAAG
i Sapajus_apella.ctg10                                  I 1 I 1
s Sapajus_macrocephalus.k141_966464                         18296 122 -     62485 GGCA------TGT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAT-C-AT-TT--ATCTA--CC-AA-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----CCTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-CAAG
i Sapajus_macrocephalus.k141_966464                     I 1 I 1
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   29581 122 -    114521 GGCA------TTT-GA-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-CTTGG-A---AAAC-AAAG
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1527475                       25394 122 +     26421 GGCA------CTT-GC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GATGG-A---AAAC-AAAG
i Semnopithecus_entellus.k141_1527475                   I 1 C 0
s Semnopithecus_hypoleucos.k141_761524                       5861 115 +     20762 --------------GC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GACGG-A---AAAC-AAAG
i Semnopithecus_hypoleucos.k141_761524                  I 8 I 1
s Semnopithecus_johnii.k141_1351450                         39589 122 +     40653 GGCA------CTT-GC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GATGG-A---AAAC-AAAG
i Semnopithecus_johnii.k141_1351450                     I 1 C 0
s Semnopithecus_priam.k141_198153                           10146 122 -     12194 GGCA------CTT-GC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GACGG-A---AAAC-AAAG
i Semnopithecus_priam.k141_198153                       I 1 C 0
s Semnopithecus_schistaceus.k141_653647                     23568 122 -     27512 GGCA------CTT-GC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GATGG-A---AAAC-AAAG
i Semnopithecus_schistaceus.k141_653647                 I 1 C 0
s Semnopithecus_vetulus.k141_642050                         32587 122 -     33692 GGCA------CTT-GC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCAA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GATGG-A---AAAC-AAAG
i Semnopithecus_vetulus.k141_642050                     I 1 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   97473  80 -    120886 GGCA------TTT-TC-AATA-GCA-AATGAATGTA-TCT-TTGGGAAGATAG-C-AT-TT--ATCTA--CT-AC-AACA-CCCA-AAGCAT-AATGGCTA--GAC--------------------------------------------------------
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 I 41
s Solenodon_paradoxus.SolPar_flattened_line_1012            16220 122 +    739146 GGCA------TTT-TC-AATA-CCAGAATGGATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CT-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAT----ACTACAGATTT-A--GAACT--CA-CTTGG-A---AGAC-AAAG
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17748435 112 -  27805282 GGCA------TTT-TC-AATT-CCAGAATGAATGCA-TCT-TTGTGAAGATAC-C-AT-TC--ATCTA--CC-AT-AACA-TCCA-AAGTGT-ACTGAAAC--GACTTTGGTA------CCTCAGATTT-A--GAACTGTGG-CTTA---------------
i Sorex_araneus.JH798170.1                              C 0 I 6
s Spermophilus_dauricus.KZ294190.1                        2237710  81 +   2842873 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCTA-AAGCAT-AATGAGGA--GAC--------------------------------------------------------
i Spermophilus_dauricus.KZ294190.1                      C 0 I 41
s Spilogale_gracilis.SpiGra_flattened_line_905             232601  79 -    276980 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--G----------------------------------------------------------
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 I 37
s Suricata_suricatta.SurSur_flattened_line_20339            25163 122 +     62062 GGCA------TTT-TC-AACA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAATG--AA-CTTGG-A---AAAC-AAAG
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189270072 122 + 218635234 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GGACT--GA-CTTGA-A---AAAC-AAAG
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        13265 122 -  13920577 ggaa------ctt-tc-aata-ccagaatgaatgta-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-ATTGG-A---AAAT-AAAG
i Symphalangus_syndactylus.tarseq_24                    I 741 T 707
s Tadarida_brasiliensis.TadBra_scaffold_145589               4018 122 -      6213 GGCA------TTT-TC-AATA-CGAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-GACA-TCCA-AAGGAT-AATGAGGA--GACTTTGACAC----CCCACAGATTT-A--GAACT--GA-CTTGA-A---AAAC-AAAG
i Tadarida_brasiliensis.TadBra_scaffold_145589          I 208 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               12950 122 +     45698 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGGAGATAC-C-AT-TT--ATCTG--CC-AT-AACA-TCCA-AAACAT-AATGAGGA--GACATTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      804939 122 +   1148477 GGCA------TTT-GC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-CTTGG-A---AAAC-AAAG
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  55600 122 +     99546 GGCA------TTT-GC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-CTTGG-A---AAAC-AAAG
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               24256 120 +     42269 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-A-AT-TT--ATCTA--CC-AT-AACA-TTCA-AAGCAT-AATGAGGA--GACT--GATAC----GCTACAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAGG
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               57572 120 +     65473 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-A-AT-TT--ATCTA--CC-AT-AACA-TTCA-AAGCAT-AATGAGGA--GACT--GATAC----GCTACAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAGG
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194004885 121 - 194193292 -GCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGAA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Theropithecus_gelada.CM009951.1                       I 1 I 1
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             37104  82 -     47444 GGTA------CTTTTC-AATG-CCAGAATGAATGTA-TCA-TTGGGAAGATAC-C-GT-TT--ATCTA--CC-AT-AACA-TCCA-TCATGT-AATGAGGA--GAC--------------------------------------------------------
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 I 25
s Tolypeutes_matacus.TolMat_scaffold_269431                  1834 122 +      6782 GGCA------CTT-TC-AATC-CTATAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACA--GA-GTTGG-A---AAAC-AAAG
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  134088 119 -    259118 GGCA------TTT-TC-AATA-CCGGACTGAATATA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATG---A--GACTTTGATAC----ACTGCCGATTT-A--GAACT--GA-CTTGA-A---AAAT-AAAG
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        23964 122 +     38948 GGCA------CTT-GC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GGTGG-A---AAAC-AAAG
i Trachypithecus_auratus.k141_738098                    I 1 I 1
s Trachypithecus_crepusculus.k141_1588528                   17691 122 -     32910 GGCA------CTT-GC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GATGG-A---AAAC-AAAG
i Trachypithecus_crepusculus.k141_1588528               I 1 I 1
s Trachypithecus_cristatus.k141_27198                       23589 122 +     24652 GGCA------CTT-GC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GGTGG-A---AAAC-AAAG
i Trachypithecus_cristatus.k141_27198                   I 1 C 0
s Trachypithecus_francoisi.k141_1178450                      2467 122 -      3559 GGCA------CTT-GC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GATGG-A---AAAC-AAAG
i Trachypithecus_francoisi.k141_1178450                 I 1 C 0
s Trachypithecus_geei.k141_670367                           40413 122 -     54611 GGCA------CTT-GC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GATGG-A---AAAC-AAAG
i Trachypithecus_geei.k141_670367                       I 1 I 1
s Trachypithecus_germaini.k141_809503                       16412 122 +     17312 GGCA------CTT-GC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GATGG-A---AAAC-AAAG
i Trachypithecus_germaini.k141_809503                   I 1 C 0
s Trachypithecus_hatinhensis.k141_357672                    23775 122 -     25040 GGCA------CTT-GC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GATGG-A---AAAC-AAAG
i Trachypithecus_hatinhensis.k141_357672                I 1 C 0
s Trachypithecus_laotum.k141_171445                          2436 122 +      3528 GGCA------CTT-GC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GATGG-A---AAAC-AAAG
i Trachypithecus_laotum.k141_171445                     I 1 C 0
s Trachypithecus_leucocephalus.k141_283605                  48803 122 +     51589 GGCA------CTT-GC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GATGG-A---AAAC-AAAG
i Trachypithecus_leucocephalus.k141_283605              I 1 I 1
s Trachypithecus_melamera.k141_238507                       11979 122 +     14732 GGCA------CTT-GC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GATGG-A---AAAC-AAAG
i Trachypithecus_melamera.k141_238507                   I 1 I 1
s Trachypithecus_obscurus.k141_1115109                       2456 122 -     28054 GGCA------CTT-GC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GATGG-A---AAAC-AAAG
i Trachypithecus_obscurus.k141_1115109                  I 1 I 1
s Trachypithecus_phayrei.ctg3                            44657251 122 -  44834318 GGCA------CTT-GC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GATGG-A---AAAC-AAAG
i Trachypithecus_phayrei.ctg3                           I 1 I 1
s Trachypithecus_pileatus.k141_469329                        2261 122 +      3372 GGCA------CTT-GC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCTA-AAGCAT-AATGAGGA--GATTTTGATAC----ATTGCAGATTT-A--GAACT--GA-GATGG-A---AAAC-AAAG
i Trachypithecus_pileatus.k141_469329                   I 1 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   3428 122 +     90398 GGCA------TTT-TC-AATA-TGAGAATGAGTGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAAGA--GACTTTGATAC----ACTGCGGATTT-A--GAAAT--GA-CTTGG-A---AAAC-AAAA
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16079524 121 +  31416278 GGCA------CTT-TC-AATA-C-AGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGAAAT----GCTGCAGATTT-A--GAATT--GA-GTTGG-A---AAAC-AAAG
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2789926 123 -   3938065 GGCA------CTT-TC-AATA-CCAGAATGAATGTG-TCT-TTGTGAAGACAC-C-AT-TT--ATCTA--CC-AT-AACA-TTGGGGGGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-a---aaac-aaaa
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    2446 123 +     13056 GGCA------CTT-TC-AATA-CCAGAATGAATGTG-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TTCGGGGGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69311652 119 -  96451834 CGTA------TTT-TC-AATA-TGAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTACGGATTT-A--GAAAT--ga-cttgg-a---aa----taa
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 24769 122 -     25548 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-CTTGG-A---AAAC-AAAG
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6512389  81 +  28682327 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGAA--GAC--------------------------------------------------------
i Ursus_maritimus.KK498671.1                            C 0 I 39
s Varecia_rubra.k141_432109                                  3023 122 -     20643 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             22567 122 -     33872 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTTGG-A---AAAC-AAAG
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1522881 122 -   2331223 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGAAAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATAAGAA--GACTTTGATAC----AATGCAGATTT-A--GAACT--GA-CTTGG-A---AAAC-AAAG
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                135333 122 -    281493 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-CTTGG-A---AAAC-AAAG
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       124808  81 -    134049 GGCA------CTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGAA--GAC--------------------------------------------------------
i Xerus_inauris.XerIna_scaffold_7898                    C 0 I 41
s Zalophus_californianus.ZalCal_flattened_line_4097        211862 122 -    227762 GGCA------TTT-TC-AATA-CCAGAATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-CTTGG-A---AAAC-AAAG
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     13047  81 -     20485 GACA------TTT-TC-AATA-GCAGAGTGAATGTA-TCT-TTGTGGCGATAT-C-AT-TT--ATCTA--CC-AT-AATA-TCCG-AAGAAT-AATGAGGA--GAC--------------------------------------------------------
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 I 39
s Ziphius_cavirostris.ZipCav_flattened_line_127025           5148 119 -      8775 GGTA------TTT-TC-AATA-TGAGAATGAATGTA-TCT-TTGTGAAGATGC-C-AT-TT--ATCTA--CC-AT-AACA-TCCA-AAGCAT-AATGAGGA--GACTTTGACAC----ACTACGGATTT-A--GAAAT--GA-CTTGG-A---AA----TAA
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Echinops_telfairi.AAIY02274224.1                            507  14 +      1655 I

a score=0.000000
s hg38.chr4_GL000008v2_random                                9629 34 +    209709 cttc-aacatactg--------tcttg-tcagcacaa---ag-CAAAT
s Acinonyx_jubatus.LLWD01000356.1                         2031705 34 +   3721120 CCCC-AAGATACTG--------TCTTG-TCagcacaa---ag-taaat
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    110288 34 -    189883 CTCT-AAAATACTG--------TCTTG-TCAGCACAA---CG-TGGAT
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 41 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10655023 34 +  23371972 CCCC-AAGATACTG--------TCTTG-TCAGcacaa---ag-taaat
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 39 C 0
s Ailurus_fulgens.LNAC01000003.1                          7091750 34 -  16596857 CCCC-AAGATACTG--------TCTTG-TCAGCACAA---AG-TAAAT
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   10717 33 -     22067 CTCT-AAGATACTG--------TCTTG-TCAGCA-AA---AG-TAGAC
i Allactaga_bullata.AllBul_scaffold_70162               I 39 C 0
s Allenopithecus_nigroviridis.k141_3103707                  60646 34 +     61638 CTTC-AAGATACTG--------TCTTG-TCAGCACAA---AG-CAAAT
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        52454 34 +     53391 CTTC-AAGATACTG--------TCTTG-TCAGCACAA---AG-CAAAT
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         3179 34 +     72529 CTTC-CAGATACTG--------TCTTG-TCAGCACAA---AG-CAAAT
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          2754 34 +      3797 CTTC-AAGATACTG--------TCTTG-TCAGCACAA---AG-CAAAT
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             7928 33 -     18050 -TTC-GAGATACTG--------TCTTG-TCAGTACAA---AG-CAAAT
i Alouatta_belzebul.k141_1818029                        I 1 C 0
s Alouatta_caraya.k141_5460                                  9041 33 -     11521 -TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG-CAAAT
i Alouatta_caraya.k141_5460                             I 1 C 0
s Alouatta_discolor.k141_811576                              8605 33 -     21359 -TTC-GAGATACTG--------TCTTG-TCAGTACAA---AG-CAAAT
i Alouatta_discolor.k141_811576                         I 1 C 0
s Alouatta_juara.k141_1856473                                6981 34 +      7227 CTTC-GAGATACTG--------TCTTG-TCAGTACAA---AG-CAAAT
i Alouatta_juara.k141_1856473                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          7896 33 -     10438 -TTC-GAGATACTG--------TCTTG-TCAGTACAA---AG-CAAAT
i Alouatta_macconnelli.k141_1331706                     I 1 C 0
s Alouatta_nigerrima.k141_2718643                            4552 33 +      7047 -TTC-GAGATACTG--------TCTTG-TCAGTACAA---AG-CAAAT
i Alouatta_nigerrima.k141_2718643                       I 1 C 0
s Alouatta_palliata.k141_1316127                             7838 33 +     10410 -TTC-CAGATACTG--------TCTTG-TCAGTACAA---AG-CAAAT
i Alouatta_palliata.k141_1316127                        T 712 C 0
s Alouatta_puruensis.k141_1284840                            1641 33 -      4927 -TTC-GAGATACTG--------TCTTG-TCAGTACAA---AG-CAAAT
i Alouatta_puruensis.k141_1284840                       I 1 C 0
s Alouatta_seniculus.k141_990213                             4571 33 +      6429 -TTC-GAGATACTG--------TCTTG-TCAGTACAA---AG-CAAAT
i Alouatta_seniculus.k141_990213                        I 1 C 0
s Ammotragus_lervia.NIVO01013474.1                        3518474 34 +   4113121 CCCC-AAGATACTG--------CCCTG-TCAGCACAA---AG-TAAAT
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      388645 34 -    631301 CCCC-AAAATACTG--------TCCTG-TCAGCACAA---AG-GAAAT
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            29074 33 +     33004 CCCC-AAGATACTG--------TCCTG-TCAGCACA----AG-TAAAT
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 60291 33 +     78111 -TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG-CAAAT
i Aotus_azarae.k141_3170768                             I 1 C 0
s Aotus_griseimembra.k141_3275623                            3229 33 +     22701 -TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG-CAAAT
i Aotus_griseimembra.k141_3275623                       I 1 C 0
s Aotus_nancymaae.KZ196176.1                              5747187 33 +   9889416 -TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG-CAAAT
i Aotus_nancymaae.KZ196176.1                            I 1 C 0
s Aotus_trivirgatus.k141_1740727                             3772 33 -    104377 -TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG-CAAAT
i Aotus_trivirgatus.k141_1740727                        I 1 C 0
s Aotus_vociferans.k141_718647                               3778 33 +     23246 -TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG-CAAAT
i Aotus_vociferans.k141_718647                          I 1 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     1793 34 +      5067 CTCC-AAGATACTG--------TCTTG-TCAGCACAA---AG-TAAAT
i Aplodontia_rufa.AprRuf_scaffold_156013                I 41 C 0
s Arctocebus_calabarensis.k141_1161114                      15740 34 +     17483 CCTC-ACAATACTG--------TCGTG-TCAGCACAA---AG-TAAAC
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 7040 35 -     29036 CCCC-CAAATGCTG--------TCCTG-TCAGCACAA--AAG-TAAAT
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9537040 33 +  39197703 -TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG-CAAAT
i Ateles_geoffroyi_b.tarseq_2582                           I 1 C 0
s Ateles_belzebuth.k141_1348307                             58324 33 +     85812 -TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG-CAAAT
i Ateles_belzebuth.k141_1348307                         I 1 C 0
s Ateles_chamek.k141_1072810                                 9323 33 +     89302 -TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG-CAAAT
i Ateles_chamek.k141_1072810                            I 1 C 0
s Ateles_geoffroyi_a.k141_1300742                             13828 33 -     58268 -TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG-CAAAT
i Ateles_geoffroyi_a.k141_1300742                         I 1 C 0
s Ateles_marginatus.k141_899112                             61819 33 +    119057 -TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG-CAAAT
i Ateles_marginatus.k141_899112                         I 1 C 0
s Ateles_paniscus.k141_1631200                               3770 33 -     25888 -TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG-CAAAT
i Ateles_paniscus.k141_1631200                          I 1 C 0
s Avahi_laniger.k141_2840928                                 4521 34 -     16375 TTTC-ACAATACTG--------TCTTG-TCAGCACAA---AA-TAAAT
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                               841 34 +      2719 TTTC-ACAATACTG--------TCTTT-TCAGCACAA---AA-TAAAT
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26378488 34 +  51448160 tttc-aagatACTG--------TCCTG-Tcagcaaaa---ag-taaat
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        3719 34 -     13118 tttc-aagatACTG--------TCCTG-Tcagcaaaa---ag-taaat
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   41569 34 -     72089 CCCC-AAGATACTG--------TTCTG-TCAGCACAA---AG-TAAAT
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6557580 34 +   6870073 CCCC-AAGATACTG--------TCCTG-TCAGCACAA---AG-TAAAT
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138137819 34 - 161108492 CCCC-AAGATACTG--------TCCTG-TCAGCACAA---AG-TAAAT
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     570193 34 -    998990 CCCC-AAGATACTG--------TCCTG-TCAGCACAA---AG-TAAAT
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136293552 34 - 158972876 CCCC-AAGATACTG--------TCCTG-TCAGCACAA---AG-TAAAT
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1229308 34 -   1914593 CCCC-AAGATACTG--------TCCTG-TCAACACAA---AG-TAAAT
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               111663 33 -    171031 -TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG-CAAAT
i Cacajao_ayresi.k141_724503                            I 1 C 0
s Cacajao_calvus.k141_96166                                 10689 33 +    125063 -TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG-CAAAT
i Cacajao_calvus.k141_96166                             I 1 C 0
s Cacajao_hosomi.k141_303789                                12737 33 -    216513 -TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG-CAAAT
i Cacajao_hosomi.k141_303789                            I 1 C 0
s Cacajao_melanocephalus.k141_1160263                        5277 33 -    134917 -TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG-CAAAT
i Cacajao_melanocephalus.k141_1160263                   I 1 C 0
s Camelus_bactrianus.KN276303.1                           3217893 34 -   8989139 CCCC-AAGATACTG--------TCCTG-TCAgcacaa---ag-taaat
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           395597 34 -  15254737 CCCC-AAGATACTG--------TCCTG-TCAgcacaa---ag-taaat
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2971331 34 +   6889770 CCCC-AAGATACTG--------TCCTG-TCAgcacaa---ag-taaat
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11516409 34 +  39901454 CCCC-AAGATACTG--------TCTTG-TCAGCACAA---AG-TAAAT
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   11427 34 +     87036 CCCC-AAGATACTG--------TCTTG-TCAGCACAA---AG-TAAAT
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11263070 34 -  35597290 CCCC-AAGATACTG--------TCTTG-TCAGcacaa---ag-taaat
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11085599 34 +  39895921 CCCC-AAGATACTG--------TCTTG-TCAGcacaa---ag-taaat
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16452623 34 -  44759192 CCCC-AAGATACTG--------TCTTG-TCAGcacaa---ag-taaat
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21323578 34 + 157394656 CCCC-AAGATACTG--------CCCTG-TCAGCACAA---AG-TAAAT
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135704805 34 - 157403528 CCCC-AAGATACTG--------CCCTG-TCAGCACAA---AG-TAAAT
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_1557951                  358 35 +       644 CTCC-AAGATGCTA--------TCTCAGATAGCACAA---AG-TAAAT
i Capromys_pilorides.CapPil_scaffold_1557951            I 39 C 0
s Carlito_syrichta.NW_007248099.1                          306893 34 +    345090 CTTC-AAGGTAGTG--------TCTTG-TCAGCACAA---GG-CAAAT
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               57839 34 +     67245 CCCC-CAAATACTG--------CCCTG-TCAGCACAA---AG-TAAAT
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   28325 34 +     33760 CTGC-AAGATACTG--------TCTTG-TCAGCACAA---AA-TAAAT
i Castor_canadensis.CasCan_scaffold_47037               I 40 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   157137 26 -    276539 CCTC-AAGATACTG--------TCTTG-TCAGCACA------------
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 I 3
s Cavia_aperea.AVPZ01000278.1                            15784499 35 -  24422027 CTCC-AAGATGCTG--------TTTTGGACAGCACAA---AG-TAAAT
i Cavia_aperea.AVPZ01000278.1                           I 39 C 0
s Cavia_porcellus.DS562889.1                             15796431 35 -  24440124 CTCC-AAGATGCTG--------TTTTGGACAGCACAA---AG-TAAAT
i Cavia_porcellus.DS562889.1                            I 39 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       174622 35 +    436027 CTCC-AAGATGCTG--------TTTTGGACAGCACAA---AG-TAAAT
i Cavia_tschudii.CavTsc_scaffold_488                    I 39 C 0
s Cebus_albifrons.Contig22                               18888516 33 -  29618158 -TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG-CAAAT
i Cebus_albifrons.Contig22                              I 1 C 0
s Cebus_olivaceus.k141_93739                                 6060 33 -     26817 -TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG-CAAAT
i Cebus_olivaceus.k141_93739                            I 1 C 0
s Cebus_unicolor.k141_239009                                10300 33 +     25043 -TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG-CAAAT
i Cebus_unicolor.k141_239009                            I 1 C 0
s Cephalopachus_bancanus.k141_702587                         5929 34 +     21754 CTTC-AAGGTAGTG--------TCTTG-TCAGCACAA---GG-CAAAT
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4361617 34 +   7569818 CCCC-AAGATACTG--------TCGCG-TCAgcacaa---ag-taaat
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         1372 34 -      9338 CCCC-AAGATACTG--------TCGCG-TCAGCACAA---AG-TAAAT
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6552439 33 +   6739814 -TTC-AAGATACTG--------TCTTG-TCAGCACAA---GG-CAAAT
i Cercocebus_atys.KQ010443.1                            I 1 C 0
s Cercocebus_chrysogaster.k141_2951608                      53915 34 -     54931 CTTC-AAGATACTG--------TCTTG-TCAGCACAA---GG-CAAAT
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         18899 34 -     19697 CTTC-AAGATACTG--------TCTTG-TCAGCACAA---GG-CAAAT
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         56431 33 -    107033 -TTC-AAGATACTG--------TCTTG-TCAGCACAA---GG-CAAAT
i Cercocebus_torquatus.k141_3969582                     I 1 C 0
s Cercopithecus_ascanius.k141_3371259                        2875 31 -      3853 CTTC-AAGATACTG--------TCTT----AGCACAA---AG-CAAAT
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          26809 33 +     30494 -TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG-CAAAT
i Cercopithecus_cephus.k141_598190                      I 1 C 0
s Cercopithecus_diana.k141_1490386                           2832 34 -      4022 CTTC-AAGATACTG--------TCTTG-TCAGCACAA---AG-CAAAT
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          2724 34 -      3505 CTTC-AAGATACTG--------TCTTG-CCAGCACAA---AG-CAAAT
i Cercopithecus_hamlyni.k141_381099                     I 122 C 0
s Cercopithecus_lowei.k141_623764                           21515 33 +     35983 -TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG-CAAAT
i Cercopithecus_lowei.k141_623764                       I 1 C 0
s Cercopithecus_albogularis.ctg51                              11988052 33 +  12117833 -TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG-CAAAT
i Cercopithecus_albogularis.ctg51                             I 1 C 0
s Cercopithecus_mona.ctg12                               46474805 33 +  46592721 -TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG-CAAAT
i Cercopithecus_mona.ctg12                              I 1 C 0
s Cercopithecus_neglectus.k141_1474992                      32631 34 +     33420 CTTC-AAGATACTG--------TCTTG-TCAGCACAA---AG-CAAAT
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        2667 34 -      3443 CTTC-AAGATACTG--------TCTTG-TCAGCACAA---AG-CAAAT
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      3658 34 -      4669 CTTC-AAGATACTG--------TCTTG-TCAGCACAA---AG-CAAAT
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        3453 34 -      4411 CTTC-AAGATACTG--------TCTTG-TCAGCACAA---AG-CAAAT
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         2983 34 -      4205 CTTC-AAGATACTG--------TCTTG-TCAGCACAA---AG-CAAAT
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_1070855          1196 34 -      1715 CTCC-ATGATACTG--------TCCTG-TCAGCAAAA---AG-TAAAT
i Chaetophractus_vellerosus.ChaVel_scaffold_1070855     C 0 C 0
s Cheirogaleus_major.k141_1157592                           56826 34 -     68416 CTTC-ACAATACTG--------TCTTG-TCAGCACAA---AG-TAAAT
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            5868 34 +     13308 CTTC-ACAATACTG--------TCTTG-TCAGCACAA---AG-TAAAT
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             3333 33 -     18223 -TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG-CAAAT
i Cheracebus_lucifer.k141_619653                        I 15 C 0
s Cheracebus_lugens.k141_203936                             20356 33 +     25473 -TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG-CAAAT
i Cheracebus_lugens.k141_203936                         I 15 C 0
s Cheracebus_regulus.k141_2128895                           39395 33 +     57117 -TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG-CAAAT
i Cheracebus_regulus.k141_2128895                       I 15 C 0
s Cheracebus_torquatus.k141_315545                          44070 33 +     54541 -TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG-CAAAT
i Cheracebus_torquatus.k141_315545                      I 15 C 0
s Chinchilla_lanigera.JH721867.1                         15959664 35 +  43084221 CTCC-AAGATGCTG--------TCTTGGACAGCACAA---AG-TAAAT
i Chinchilla_lanigera.JH721867.1                        I 39 C 0
s Chiropotes_israelita.k141_1189915                         68885 33 +    196370 -TTC-AAGATACTA--------TCTTG-TCAGTACAA---AG-CAAAT
i Chiropotes_israelita.k141_1189915                     I 1 C 0
s Chiropotes_sagulatus.k141_773804                          13065 33 +     40510 -TTC-AAGATACTA--------TCTTG-TCAGTACAA---AG-CAAAT
i Chiropotes_sagulatus.k141_773804                      I 1 C 0
s Chlorocebus_aethiops.ctg22                             15136266 33 -  15256731 -TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG-CAAAT
i Chlorocebus_aethiops.ctg22                            I 1 C 0
s Chlorocebus_pygerythrus.k141_1486215                      31312 33 -     53260 -TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG-CAAAT
i Chlorocebus_pygerythrus.k141_1486215                  I 1 C 0
s Chlorocebus_sabaeus.CM001963.2                        101141761 33 + 101219884 -TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG-CAAAT
i Chlorocebus_sabaeus.CM001963.2                        I 1 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                14796 34 -     21363 CTCA-AAGATACTG--------TCCTG-TCAGCACAA---AG-TAAAT
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           760107 34 +    964067 CTCA-AAGATACTG--------TCCTG-TCAGcacaa---ag-taaat
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_141308              6907 34 -     12508 CTCC-AAGATACTG--------TCCTG-TCAGCACAA---AC-TAAAT
i Chrysochloris_asiatica.ChrAsi_scaffold_141308         C 0 C 0
s Colobus_angolensis.KN985967.1                          10880340 33 +  10971483 -TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG-CAAAT
i Colobus_angolensis.KN985967.1                         I 1 C 0
s Colobus_guereza.LG08                                  147661498 33 + 156195979 -TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG-CAAAT
i Colobus_guereza.LG08                                  I 1 C 0
s Colobus_polykomos.k141_1406057                            13485 33 +     23629 -TTC-AAGATACTG--------TCTCG-TCAGCACAA---AG-CAAAT
i Colobus_polykomos.k141_1406057                        I 1 C 0
s Condylura_cristata.JH655880.1                          60611097 34 +  78930452 CCCC-AAGATACTG--------TCCTG-TCagcataa---ag-gaaat
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         37555 33 -     40477 CCCC-AA-ATACTG--------CCTTG-TCAGCAGAA---AG-TAAAT
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 275377 34 -    399297 CTAT-AGGATACTG--------TCTTG-TCAGCACAA---AG-TGAAA
i Cricetomys_gambianus.CriGam_scaffold_949              I 41 C 0
s Cricetulus_griseus.LT883672.1                          53026909 34 +  72327488 CTAT-AAGATACTG--------TCTTG-TCAGCACAA---AG-TGAAT
i Cricetulus_griseus.LT883672.1                         I 41 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             18034 33 -     19186 TATC-C-TGTACTG--------TCTTG-TCAGCACAA---AG-TAAAT
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            49717 34 -     70449 CCCC-AAGATACTG--------TCTTG-TCAGCACAA---AG-TAAAT
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  206074 34 -    956709 CTCC-AAGACACTG--------TCCTG-TCAGCACAA---AG-TAAAG
i Ctenodactylus_gundi.CteGun_scaffold_447               I 39 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 28443 35 -     67205 TTCC-AAGATGCTG--------TCTGAGGCAGCACAA---AG-AAAAT
i Ctenomys_sociabilis.CteSoc_scaffold_19489             I 39 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                15271 35 +     26546 CTCC-AAGATGCTG--------TCTTGGACAGCACAA---AG-TAAAT
i Cuniculus_paca.CunPac_flattened_line_16637            I 39 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             56754 35 -    236241 CTCC-AAGATGCTG--------TCTTGGACAGCACAA---AG-TAAAT
i Dasyprocta_punctata.DasPun_flattened_line_634         I 39 C 0
s Dasypus_novemcinctus.JH568778.1                          180006 34 -   6883506 CTCC-AAGATACTG--------CGCTG-Tcagcaaaa---ag-taaat
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16842694 34 +  31942871 CTTC-ACAATACTG--------TCTTG-TCAGCACAA---AG-TAAAT
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80035172 34 -  96802777 tttc-aagatACTG--------TCCAG-Tcagcaaaa---ag-taaat
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18697149 34 -  18957592 cccc-aaaaTACTG--------TCTTG-CCAGCACAA---AG-TAAAT
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 320275 34 +    993696 CCCC-AAGATACTG--------TCGCG-TCAGCACAA---AG-TAAAT
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                    919 34 +    151128 CCCC-AAGATACTG--------TCGCG-TCAGCACAA---AA-TAAAT
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   155547 35 +    228994 CTCC-AAGATGCTG--------TCTTGGACAACACGA---AG-TAAAT
i Dinomys_branickii.DinBra_scaffold_1996                I 37 C 0
s Dipodomys_ordii.KN672545.1                              3653296 34 +   4240102 CTTT-AAGATACTG--------TCTAG-TCTGCATAA---AG-CAAAT
i Dipodomys_ordii.KN672545.1                            I 39 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 24852 30 +     28912 -----AAGATACTG--------TCTAG-TCTGCATAA---AG-CAAAT
i Dipodomys_stephensi.DipSte_scaffold_44365             I 38 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                34015 35 -     73477 CTCC-AAGATGCTG--------TCTTGGATAGCACAA---AG-TAAAT
i Dolichotis_patagonum.DolPat_scaffold_14102            I 39 C 0
s Eidolon_helvum.KE772537.1                                 10522 34 +     24177 CCCC-TAGATACTG--------TCCCA-TCAGcacaa---ag-taaat
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1489836 34 +   1727528 CCGC-AAGATACTG--------TCCTG-TCAGCACAA---AG-TAAAT
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7804588 34 +  15467074 CTCC-AAGATACTG--------TCCTG-TCAGCACAA---AG-TAAAT
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        237567 34 -    369425 CTAT-AAGATACTG--------TCTTG-TCAGCGCAA---AG-TAGAT
i Ellobius_lutescens.LOEQ01003611.1                     I 41 C 0
s Ellobius_talpinus.LOJH01090055.1                           4580 34 -      7838 CTAT-AAGATACTG--------TCTTG-TCAGCACAA---AG-TAGAT
i Ellobius_talpinus.LOJH01090055.1                      I 41 C 0
s Enhydra_lutris.KZ291749.1                              85869482 34 +  99434291 CCCC-AAGATACTG--------TCTTG-TCAGcacaa---ag-taaat
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4702110 33 +   6522550 CC-T-CAAATACTG--------TCCTA-TCAGCACCA---AA-GAAAT
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5851010 34 -   7175178 CCCT-AAGATCCTG--------TCATG-TCAGcacaa---ag-taaat
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13349512 34 +  41866177 CCCT-AAGATCCTG--------TCATG-TCAGCACAA---AG-TAAAT
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          11002 34 +     92910 CCCT-AAGATCCTG--------TCATG-TCAGCACAA---AG-TAAAT
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11530799 34 +  16010500 CCGG-GAGATACTG--------GCCTG-TCAGCACAC---AG-TAAAT
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48768444 33 -  48907691 -TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG-CAAAT
i Erythrocebus_patas.Contig8                            I 1 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          313374 34 +    330699 TTTC-AAGATACTG--------TCCTG-TCAGCAAAA---AG-TAAAT
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             59804 34 +     89355 TTTC-AAGATACTG--------TCCTG-TCAGCAAAA---AG-TAAAT
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              2873 34 +     13586 CTTC-ACAATACTG--------TCTTG-TCAGCACAA---AG-TAAAT
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               2808 34 -      6809 CTTC-ACAATACTG--------TCTTG-TCAGCACAA---AG-TAAAT
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             9284 34 +     36558 CTTC-ACAATACTG--------TCTTG-TCAGCACAA---AG-TAAAT
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             5598 34 +     60246 CTTC-ACAATACTG--------TCTTG-TCAGCACAA---AG-TAAAT
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 9081 34 +    109717 CTTC-ACAATACTG--------TCTTG-TCAGCACAA---AG-TAAAT
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               13460 34 +     16540 CTTC-ACAATACTG--------TCTTG-TCAGCACAA---AG-TAAAT
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                13736 34 +     27497 CTTC-ACAATACTG--------TCTTG-TCAGCACAA---AG-TAAAT
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           16202 34 +     26808 CTTC-ACAATACTG--------CCTTG-TCAGCACAA---AG-TAAAT
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                30926 34 +     46535 CTTC-ACAATACTG--------TCTTG-TCAGCACAA---AG-TAAAT
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              13649 34 -     29447 CTTC-ACAATACTG--------TCTTG-TCAGCACAA---AG-TAAAT
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129890681 34 - 159252932 CCCC-AAGATACTG--------TCTTG-TCagcacaa---ag-taaat
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129277756 34 - 158578461 CCCC-AAGATACTG--------TCTTG-TCagcacaa---ag-taaat
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 18891 34 +     52776 CCCC-AAGATACTG--------TCTTG-TCAGCACAA---AG-TAAAT
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13890613 34 -  19261668 CTCC-AAGATGCTG--------TCTTG-TCAGCACAA---AG-TAAAC
i Fukomys_damarensis.KN123630.1                         I 37 C 0
s Galago_moholi.ctg555                                     208792 33 -    847004 CCTC-CCAATACTG--------TCATG-TCAGCACAA---AG-T-AAC
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           11173 33 -     43889 CCTC-CCAATACTG--------TCATG-TCAGCACAA---AG-T-AAC
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           8237 33 +     27357 CCTC-CCAATACTG--------TCATG-TCAGCACAA---AG-T-AAC
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               154151 34 +    324696 CTCT-GAGATCCTG--------TCTTG-TCAGCACAA---AG-TAAAT
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    179351 34 -    189561 CCCC-AAGATACTG--------TCCTG-TCAGCACAA---AG-TAAAT
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           10558 34 -     18683 CGCC-AAGATACTG--------TCTTG-TCAGCACAA---AG-TAAAT
i Glis_glis.GliGli_scaffold_79770                       I 41 C 0
s Gorilla_beringei.k141_111300                               3032 33 -     14630 -TTC-AGGATACTG--------TCTTG-TCAGCACAA---AG-CAAAT
i Gorilla_beringei.k141_111300                          T 742 C 0
s Gorilla_gorilla.LT578340.1                            119650131 33 - 195582420 -TTC-AGGATACTG--------TCTTG-TCAGCACAA---AG-CAAAT
i Gorilla_gorilla.LT578340.1                            T 742 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   75087 34 +    118900 CGCC-AAGATACTG--------TCTTG-TCAGCACAA---AG-TAAAT
i Graphiurus_murinus.GraMur_scaffold_4493               I 41 C 0
s Hapalemur_alaotrensis.k141_1198205                         3433 34 +      3980 CTTC-ACAATACTG--------TCTTG-TCAGCACAA---AG-TAAAT
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             25908 34 +     26611 CTTC-ACAATACTG--------TCTTG-TCAGCACAA---AG-TAAAT
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             3370 34 +     56096 CTTC-ACAATACTG--------TCTTG-TCAGCACAA---AG-TAAAT
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        26645 34 -     42470 CTTC-ACAATACTG--------TCTTG-TCAGCACAA---AG-TAAAT
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        43239 34 -     54384 CTTC-ACAATACTG--------TCTTG-TCAGCACAA---AG-TAAAT
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              14926 34 +     53719 CCCC-AAGATACTG--------TCTTG-TCAGCACAA---AG-TAAAT
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                25850 34 -     91191 CCCC-AAGATACTG--------TCCTG-TCAGCACAA---AG-TAAAT
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2548999 34 +  31725842 CTCC-AAGATGCTG--------TCTTG-TCAGCACAA---AG-TAAAT
i Heterocephalus_glaber.JH602058.1                      I 39 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               54404 34 +     73687 TTCC-AAGATACTG--------CTCTC-TCAGCACAA---AG-TCAAT
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              145415 34 +    277961 CCCC-AAGATACTG--------TCCTG-TCAGCAAAA---AG-TAAAT
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      276754 34 -    477199 CCCC-AAGATACCG--------TCTTG-TCAGcataa---ag-caaat
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              5912 34 -      9143 CTCC-AAGATACTG--------TCTTG-TCAGCATAA---AG-TAAAT
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg649                                    99711 34 +    115816 CTTC-AAGATACTG--------TCTTG-TCAGCACAA---AG-CAAAT
i Hoolock_leuconedys.ctg649                                I 122 I 68
s Hyaena_hyaena.HyaHya_flattened_line_20729                 13979 34 -     67322 CCCC-AAGATACTG--------TCTTG-TCAGCACAA---AG-TAAAT
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16916 35 -    119109 TTCC-AAGATGCTG--------TCTTGGGCAGCACAA---AG-TAAAT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       I 39 C 0
s Hylobates_abbotti.k141_493872                              2848 34 +      5897 CTTC-AAGATACTG--------GCTTG-TCAGCACAA---AG-CAAAT
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_1485652                              1269 34 -      1697 CTTC-AAGATACTG--------GCTTG-TCAGCACAA---AG-CAAAT
i Hylobates_agilis.k141_1485652                         C 0 C 0
s Hylobates_klossii.k141_466549                              9293 34 +     11537 CTTC-AAGATACTG--------TCTTG-TCAGCACAA---AG-CAAAT
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14622394 34 -  25970782 CTTC-AAGATACTG--------GCTTG-TCAGCACAA---AG-CAAAT
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1133650                            2283 34 -      2775 CTTC-AAGATACTA--------GCTTG-TCAGCACAA---AG-CAAAT
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             30887 34 -     60944 CTTC-AAGATACTG--------GCTTG-TCAGCACAA---AG-CAAAT
i Hylobates_pileatus_a.tarseq_592                         C 0 I 1
s Hystrix_cristata.HysCri_scaffold_50788                     4049 34 +     22540 CCTC-CAGATCCTG--------CCTTG-TCAGCACAA---AG-TACAT
i Hystrix_cristata.HysCri_scaffold_50788                I 39 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7123916 34 +  13083262 CTCC-AAGAGACTG--------TCTTG-TCAgcacaa---ag-taaat
i Ictidomys_tridecemlineatus.JH393315.1                 I 41 C 0
s Indri_indri.k141_1884019                                   1109 34 -      2196 CTTC-ACAATACTG--------TCTTG-TCAGCACAA---AG-TAAAT
i Indri_indri.k141_1884019                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               7161 34 +     17520 TTTC-AAGATACTG--------CCCTG-TCAGCAAAA---AG-TAAAT
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8563457 33 +  11848649 CTCT-AAGATACTG--------TCTTG-TCAGCA-AA---AG-TAGAC
i Jaculus_jaculus.JH725517.1                            I 39 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               21987 34 +     37189 TTTC-AAGATACTG--------TCCTG-TCAGCAAAA---AG-TAAAT
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          47894 33 -    147782 -TTT-AAGATACTG--------TCTTG-TCAGTACAA---AG-CAAAT
i Lagothrix_lagothricha.k141_12968                      I 1 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   111904 33 -    115756 CC-T-CAAATACTG--------TCCTA-TCAGCACCA---AA-GAAAT
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258404928 34 - 285822530 CTTC-ACAATACTG--------TCTTG-TCAGCACAA---AG-TAAAT
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        21800 34 +     39228 CTTC-ACAATACTG--------TCTTG-TCAGCACAA---AG-TAAAT
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            51173 34 +     63517 CTTC-ACAATACTG--------TCTTG-TCAGCACAA---AG-TAAAT
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        76415 34 +    116806 CTTC-ACAATACTG--------TCTTG-TCAGCACAA---AG-TAAAT
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     29438 34 -     33031 CTTC-ACAATACTG--------TCTTG-TCAGCACAA---AG-TAAAT
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3083694 34 -   3498232 CCCC-AAGATACTG--------TCTTG-TCAGcacaa---ag-taaat
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    10904 34 +     22452 CTCT-GAGATACTG--------TCTTG-TCAGCACAA---AG-TAAAT
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            134319 34 +   3060487 TTTC-AAGATACTG--------TCCTG-Tcagcaaaa---ag-taaat
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19245527 33 +  19376315 -TTT-GAGATACTG--------TCTTG-TCAGCACAA---GG-CAAAT
i Lophocebus_aterrimus.ctg55                            I 1 C 0
s Loris_lydekkerianus.k141_550999                            8543 34 +     84689 CCTC-ACAGTACCT--------TCCTG-TCAGCACAA---AG-TCAAC
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3776294 34 +   6799190 CCTC-ACAGTACCA--------TTCTG-TCAGCACAA---AG-TCAAC
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20589181 34 -  62548349 TTCC-AAGATACTG--------TCCTG-TCAGCACAA---AG-TAAAT
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11085055 34 +  39895028 CCCC-AAGATACTG--------TCTTG-TCAGcacaa---ag-taaat
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             17213 33 +     74745 -TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG-CAAAT
i Macaca_arctoides.k141_2201161                         I 1 C 0
s Macaca_assamensis.Contig65                             12703719 33 +  12821369 -TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG-CAAAT
i Macaca_assamensis.Contig65                            I 1 C 0
s Macaca_cyclopis.k119_1168412                               5814 34 +      6569 CTTC-AAGATACTG--------TCTTG-TCAGCACAA---AG-CAAAT
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           44117 33 +     63263 -TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG-CAAAC
i Macaca_fascicularis.k141_155037                       I 1 C 0
s Macaca_fuscata.k119_599327                                  133 34 -      2568 -TTT-GAGATACTG--------TCTCG-TCAGCACAA---AGACACTC
i Macaca_fuscata.k119_599327                            n 26 T 81
s Macaca_leonina.k141_3421209                                2265 34 +      3017 CTTC-AAGATACTG--------TCTTG-TCAGCACAA---AG-CAAAT
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  43877 35 -     79256 CTTT-GAGATACTG--------TCTCG-TCAGCACAA---AGACACTC
i Macaca_maura.k141_251854                              C 0 T 158
s Macaca_mulatta.NC_041755.1                            196032796 33 + 196197964 -TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG-CAAAT
i Macaca_mulatta.NC_041755.1                            I 1 C 0
s Macaca_nemestrina.KQ004885.1                           11442902 33 +  11645122 -TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG-CAAAT
i Macaca_nemestrina.KQ004885.1                          I 1 C 0
s Macaca_nigra.k141_282495                                   2824 35 -     46448 CTTT-GAGATACTG--------TCTCG-TCAGCACAA---AGACACTC
i Macaca_nigra.k141_282495                              C 0 T 158
s Macaca_radiata.k141_1580474                                2655 34 -      3617 CTTC-AAGATACTG--------TCTTG-TCAGCACAA---AG-CAAAT
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 12988 33 -     55006 -TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG-CAAAT
i Macaca_siberu.k141_741907                             I 1 C 0
s Macaca_silenus.Contig12                                43838025 33 +  43892939 -TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG-CAAAT
i Macaca_silenus.Contig12                               I 1 C 0
s Macaca_thibetana.k99_116940                                5246 34 -      5978 CTTC-AAGATACTG--------TCTTG-TCAGCACAA---AG-CAAAT
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               2829 35 -     27140 CTTT-GAGATACTG--------TCTCG-TCAGCACAA---AGACACTC
i Macaca_tonkeana.k141_2870633                          C 0 T 158
s Macroglossus_sobrinus.MacSob_scaffold_879                699940 34 +    802869 CCCC-TAGATACTG--------TCCCA-TCAGCACAA---AG-TAAAT
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43434687 33 -  43563597 -TTC-AAGATACTG--------TCCTG-TCAGCACAA---GG-CAAAT
i Mandrillus_leucophaeus.scaffold125                    I 42 C 0
s Mandrillus_sphinx.Contig144                             4447513 33 -   4543643 -TTC-AAGATACTG--------TCTTG-TCAGCACAA---GG-CAAAT
i Mandrillus_sphinx.Contig144                           I 42 C 0
s Manis_javanica.JSZB01003966.1                            144432 34 +    252755 CCCC-AAGATACTG--------TCCTG-TCAGCAGAA---AG-TAAAT
i Manis_javanica.JSZB01003966.1                         I 58 C 0
s Manis_pentadactyla.KN017078.1                             34504 34 +     58827 CCCC-AAGATACTG--------TCCTG-TCAGCAGAA---AG-TAAAT
i Manis_pentadactyla.KN017078.1                         I 56 C 0
s Marmota_marmota.CZRN01000005.1                         36871756 34 +  64221397 CTCC-AAGAGACTG--------TCTTG-TCAGcacaa---ag-taaat
i Marmota_marmota.CZRN01000005.1                        I 41 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       62595 33 -    234502 CCCC-AA-GTACTG--------TCCTG-TCAGCATAA---AG-TGAAT
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_146202             293 34 -      1999 CCCC-AAGATACTG--------TCTTG-TCAGCACAA---AA-TAAAT
i Mellivora_capensis.MelCap_flattened_line_146202       n 104 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233                9866 34 +     15977 CTCT-AAGATACTG--------TCTTG-TCAGCACAG---CA-TGGAT
i Meriones_unguiculatus.MerUng_scaffold_52233           I 41 C 0
s Mesocricetus_auratus.KB708139.1                         1044649 34 -  26018355 CAAT-AAGATACTG--------TCTTG-TCAGCACAA---AG-TGGAT
i Mesocricetus_auratus.KB708139.1                       I 41 C 0
s Mesoplodon_bidens.MesBid_scaffold_183284                   2031 34 +      2166 TTTC-AAGATACTG--------TCCTG-TCAGCAAAA---AG-TAAAT
i Mesoplodon_bidens.MesBid_scaffold_183284              C 0 C 0
s Microcebus_murinus.CM007691.1                          16508048 34 +  47401472 CTTC-ACAATACTG--------TCTTG-TCAGCACAA---AC-TAAAT
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  29317 34 -     48017 CTCC-AAGATACTG--------TGCTG-TCAGCAAAA---AG-TAAAT
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               21016 34 -     32043 CCCC-AAAGTACTG--------TCCTG-TCAGCACAA---AG-TAAAT
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22817767 34 -  98408828 CTAT-AAGATACTG--------TCTTG-TCAGCACAA---AG-TAGAT
i Microtus_ochrogaster.CM001673.1                       I 41 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8207776 33 +  10048721 CC-C-CAAATACTG--------TCCTG-TCAGCGCGA---AG-GAAAC
i Miniopterus_natalensis.LDJU01000022.1                 I 54 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            32447 33 +     45743 CC-C-CAAATACTG--------TCCTG-TCAGCGCGA---AG-GAAAC
i Miniopterus_schreibersii.MinSch_scaffold_24116        I 54 C 0
s Miopithecus_ogouensis.k141_2666161                        33345 34 +     34273 CTTC-AAGATACTG--------TCTTG-TCAGCACAA---AG-CAAAT
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         8999 34 -    104932 CCCC-AAGATACTG--------TCTTG-TCAGCACAA---AG-TAAAT
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     3453 34 +      8497 CTTC-ACAATACTG--------TCTTG-TCAGCACAA---AG-TAAAT
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 144756 34 +    154973 TTTC-AAGATACTG--------TCCAG-TCAGCAAAA---AG-TAAAT
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                159526 34 +    265003 CCCC-AAAATACTG--------TCCTG-TCAGCGCGA---AG-TAAAT
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 2938 34 -      4346 CCCC-AAGATACTG--------TCCTG-TCAGCACAA---AG-TAAAT
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  142619 34 -    168139 CCCC-AAGATACTG--------TCTTG-TCAGCACAA---AG-TAAAT
i Mungos_mungo.MunMun_flattened_line_8729               I 39 C 0
s Murina_feae.MurFea_scaffold_2254                          17420 31 -    100666 CC-T-CAAA-ACTG--------T-CTA-TCAGCACCA---AA-GAAAT
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70764280 34 +  92629107 CTAT-AAGAGACTG--------TCTTG-TCAGCACAA---TG-TAGAT
i Mus_caroli.LT608236.1                                 I 41 C 0
s Mus_musculus.chr16                                     75487317 34 +  98207768 CTAT-AAGAGACTG--------TCTTG-TCAGCACAA---TG-TGAAT
i Mus_musculus.chr16                                    I 41 C 0
s Mus_pahari.LT608305.1                                  67553488 34 +  89017189 CTAT-AAGAGACTG--------TCTTG-TCAGCACAG---TG-TGGAT
i Mus_pahari.LT608305.1                                 I 41 C 0
s Mus_spretus.CM004110.1                                 74328498 34 +  97876770 TCAT-AAGAGACTG--------TCTTG-TCAGCACAA---TG-TGAAT
i Mus_spretus.CM004110.1                                I 41 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              9041 34 +     98495 CGCC-AAGATACTG--------TCTTG-TCAGCACAA---AG-TAAAT
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 41 C 0
s Mustela_putorius.JH417978.1                             4421864 34 -  28371801 CCCC-AAGATACTG--------TCTTG-TCAGcacaa---ag-taaat
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     87993 35 -    117718 CTCC-AAGATGCTG--------TCTCGGACAGCACAA---AG-GAAAT
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 39 C 0
s Myotis_brandtii.KE161952.1                               965740 32 +   8389877 CC-T-CAAA-ACTG--------TCCTA-TCAGCACCA---AA-GAAAT
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5017431 32 +   6462685 CC-T-CAAA-ACTG--------TCCTA-TCAGCACCA---AA-GAAAT
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3463327 32 -   3747815 CC-T-CAAA-ACTG--------TCCTA-TCAGCACCA---AA-GAAAT
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         8522 32 +     66751 CC-T-CAAA-CCTG--------TCCTA-TCAGCACCA---AA-GAAAT
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3398 34 -      8794 CTCC-AAGATACTG--------TCCTG-TCAGCACAA---AG-TAAAT
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            108376 34 +    362372 CTGT-AAGATACTG--------GCTTG-TCAGCACAA---AG-TGAAT
i Nannospalax_galili.KL201303.1                         I 41 C 0
s Nasalis_larvatus.k141_153429                               5725 33 +     48152 -TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG-CAAAT
i Nasalis_larvatus.k141_153429                          I 1 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4482598 34 -  14209539 CCCC-AAGATACTG--------TCTTG-TCAGcacaa---ag-taaat
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3949368 34 -   4490290 tttc-aagatACTG--------TCCAG-Tcagcaaaa---ag-taaat
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  47642 34 +     94413 CCCT-GAAATACTG--------TCCTG-TCAGCACAA---AG-TAAAT
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1439838                            597 33 +      3718 -TTC-AAGATACTG--------GCTTG-TCAGCACAA---AG-CAAAT
i Nomascus_annamensis.k141_1439838                      T 735 C 0
s Nomascus_concolor.k141_49591                                820 33 +      2014 -TTC-AAGATACTG--------GCTTG-TCAGCACAA---AG-CAAAT
i Nomascus_concolor.k141_49591                          T 735 C 0
s Nomascus_gabriellae.k141_906566                            2147 34 -      2544 CTTC-AAGATACTG--------GCTTG-TCAGCACAG---AG-CAAAT
i Nomascus_gabriellae.k141_906566                       I 122 C 0
s Nomascus_siki_b.tarseq_80                             22624 33 -  18771707 -TTC-AAGATACTG--------GCTTG-TCAGCACAA---AG-CAAAT
i Nomascus_siki_b.tarseq_80                         T 771 C 0
s Nomascus_siki_a.k141_844529                                  1898 34 +      2124 CTTC-AAGATACTG--------GCTTG-TCAGCACAA---AG-CAAAT
i Nomascus_siki_a.k141_844529                             I 122 T 157
s Nyctereutes_procyonoides.CAJHUB010000786.1                28048 34 +   3668941 CCCC-AAGATACTG--------TCTTG-TCAGcacaa---ag-taaat
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65564889 34 -  95554990 CCTC-ACAATACCA--------TCCTG-TCAGCACAA---AG-TCAAC
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            1734 34 +      6470 CCTC-ACAATACCA--------TCCTG-TCAGCACAA---AG-TCAAC
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65667259 34 +  89412551 CCTC-ACAATACCA--------TCCTG-TCAGCACAA---AG-TCAAC
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4993877 34 -  23139505 CCGC-AAGATACTG--------CCTTG-TCAGCACTA---AG-GAAGT
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3683465 35 +  10294119 CTCC-AAGATGCTG--------TCTGAGAcagcacaa---ag-aaaat
i Octodon_degus.JH651621.1                              I 39 C 0
s Odobenus_rosmarus.KB229369.1                             677254 34 -   3126709 CCCC-AAGATACTG--------TCTTG-TCAGCACAA---AG-TATAT
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1078066 34 +   1425656 CCCC-AAGATACTG--------TCCCG-TCAGcacaa---ag-taaat
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         35221 34 +     78940 CCCC-AAGATACTG--------TCCTG-TCAGCACAA---AG-TAAAT
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  123041 34 +    145789 CTAT-AAGATACTG--------TCTTG-TCAGCACAA---AG-TAGAT
i Ondatra_zibethicus.OndZib_scaffold_6821               I 40 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  34797 34 +     62360 CTAT-AAGATACTG--------TCTTG-TCAGCATAA---AG-TGAAT
i Onychomys_torridus.OnyTor_scaffold_12578              I 41 C 0
s Orcinus_orca.KB316965.1                                 7223052 34 -   7562323 tttc-aagatACTG--------TCCAG-Tcagcaaaa---ag-taaat
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              41437 34 -     66828 CTCC-AAGATATTG--------TCCTG-TCAGCACGA---AG-TAAAT
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141873562 34 + 163896628 CTCC-GAGATACTG--------TCTTG-TCAGCACAA---AG-TAAAT
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      305387 34 -    505867 CCCC-AAGATACTG--------TCTTG-TCAGcacaa---ag-taaat
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       36880 33 +     38679 CCTC-CCAATACTG--------TCATG-TCAGCACAA---AG-T-AAC
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18006322 33 -  38779656 CCTC-CCGATACTG--------TCATG-TCAGCAcaa---ag-t-aac
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134075643 34 - 275406953 CCCC-AAGATACTG--------TCCTG-TCAGcacaa---ag-taaat
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      76857 34 +    140051 CCCC-AAGATACTG--------TCCTG-TCAGCACAA---AG-TAAAT
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127572376 33 - 205426864 -TTC-AGGATACTG--------TCTTG-TCAGCACAA---AG-CAAAT
i Pan_paniscus.CM003386.1                               I 1 C 0
s Pan_troglodytes.CM009241.2                            120149529 33 - 196562556 -TTC-AGGATACTG--------TCTTG-TCAGCACAA---AG-CAAAT
i Pan_troglodytes.CM009241.2                            I 1 I 67
s Panthera_onca.PanOnc_flattened_line_1615                  32082 34 +    295523 CCCC-AAGATACTG--------TCTTG-TCAGCACAA---AG-TAAAT
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3635815 34 +  18214204 CCCC-AAGATACTG--------TCTTG-TCagcacaa---ag-taaat
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5025463 34 -   6340057 CCCC-AAGATACTG--------TCTTG-TCagcacaa---ag-taaat
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1064504 34 -   1292953 CCCC-AAGATACTG--------CCCTG-TCAGCACAA---AG-TAAAT
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188153471 33 - 188283584 -TTT-GAGATACTG--------TCTTG-TCAGCACAA---GG-CAAAT
i Papio_anubis.CM001492.2                               I 1 C 0
s Papio_cynocephalus.k141_386926                            49682 34 +     76494 CTTT-GAGATACTG--------TCTTG-TCAGCACAA---GG-CAAAT
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47510868 33 +  47705337 -TTT-GAGATACTG--------TCTTG-TCAGCACAA---GG-CAAAT
i Papio_hamadryas.Contig15                              I 1 C 0
s Papio_kindae.k141_5458022                                 64845 33 -    104429 -TTT-GAGATACTG--------TCTTG-TCAGCACAA---GG-CAAAT
i Papio_kindae.k141_5458022                             I 1 C 0
s Papio_papio.k141_3561084                                  14635 34 -     29451 CTTT-GAGATACTG--------TCTTG-TCAGCACAA---GG-CAAAT
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                35038 34 +     35859 CTTT-GAGATACTG--------TCTTG-TCAGCACAA---GG-CAAAT
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113382 34 -    135482 CCCC-AAGATACTG--------TCTTG-TCAGCACAA---AG-TAAAT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           2933 34 -     23713 CCTC-ACAATACTG--------TCATG-TCAGCACAA---AG-TAAAC
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            22232 34 -     27972 CCTC-ACAATACTG--------TCATG-TCAGCACAA---AG-TAAAC
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      40849 34 -     45160 CTTT-AAGATACTG--------TCTTG-TAAGCACAA---AG-AAAAT
i Perognathus_longimembris.PerPac_flattened_line_22291  I 39 C 0
s Peromyscus_maniculatus.KI615518.1                       4947973 34 -   8017169 CTAT-AAGATACTG--------TCTTG-TCAGCATAA---AG-TGGAT
i Peromyscus_maniculatus.KI615518.1                     I 41 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    10154 34 -     36578 CTCT-GAGATGCTG--------TCTTG-TCAGCACAA---AG-TAAAT
i Petromus_typicus.PetTyp_scaffold_33007                I 35 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            119669 34 -    122454 TTTC-AAGATACTG--------TCCAG-TCAGCAAAA---AG-TAAAT
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           2728 34 -      3310 CTTC-AAGATACTG--------TCTTG-TCAGCACAA---AG-CAAAT
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       22633 34 -     82327 CTTC-AAGATACTG--------TCTTG-TCAGCACAA---AG-CAAAT
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           19380 34 +     19957 CTTC-AAGATACTG--------TCTTG-TCAGCACAA---AG-CAAAT
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26737395 33 +  26888534 -TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG-CAAAT
i Piliocolobus_tephrosceles.PDMG02000036.1              I 1 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            95191 33 +    112873 CC-T-CAAATACTG--------TCCTA-TCAGCACCA---AA-TAAAT
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             41377 33 -     61926 -TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG-CAAAT
i Pithecia_albicans.k141_991845                         I 1 C 0
s Pithecia_chrysocephala.k141_159118                        22806 33 +     78826 -TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG-CAAAT
i Pithecia_chrysocephala.k141_159118                    I 1 C 0
s Pithecia_hirsuta.k141_1152968                              6757 33 -     15800 -TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG-CAAAT
i Pithecia_hirsuta.k141_1152968                         I 1 C 0
s Pithecia_mittermeieri.k141_2119203                         9955 33 -     16101 -TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG-CAAAT
i Pithecia_mittermeieri.k141_2119203                    I 1 C 0
s Pithecia_pissinattii.k141_1102319                          3264 33 +      9673 -TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG-CAAAT
i Pithecia_pissinattii.k141_1102319                     I 1 C 0
s Pithecia_pithecia.tarseq_313                           13472258 33 -  19735023 -TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG-CAAAT
i Pithecia_pithecia.tarseq_313                          I 1 C 0
s Pithecia_vanzolinii.k141_831006                           11166 33 -     31692 -TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG-CAAAT
i Pithecia_vanzolinii.k141_831006                       I 1 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           3737 34 +     21690 TTTC-AAGATACTG--------TCCTG-TCAGCAAAA---AG-TAAAT
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       20598 33 +     44506 -TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG-CAAAT
i Plecturocebus_bernhardi.k141_959214                   I 1 C 0
s Plecturocebus_brunneus.k141_498086                        20808 33 +     67491 -TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG-CAAAT
i Plecturocebus_brunneus.k141_498086                    I 1 C 0
s Plecturocebus_caligatus.k141_2539816                      11049 33 -     98129 -TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG-CAAAT
i Plecturocebus_caligatus.k141_2539816                  I 1 C 0
s Plecturocebus_cinerascens.k141_744510                     20654 33 +    147771 -TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG-CAAAT
i Plecturocebus_cinerascens.k141_744510                 I 1 C 0
s Plecturocebus_cupreus.k141_1223294                        20904 33 -     23762 -TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG-CAAAT
i Plecturocebus_cupreus.k141_1223294                    I 1 C 0
s Plecturocebus_dubius.k141_3565563                          1370 33 -     55515 -TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG-CAAAT
i Plecturocebus_dubius.k141_3565563                     I 1 C 0
s Plecturocebus_grovesi.k141_242819                         20723 33 +    152463 -TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG-CAAAT
i Plecturocebus_grovesi.k141_242819                     I 1 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      7483 33 +      8943 -TTC-AAGATACTG--------TCTTG-TCAGTACAA---AT-CAAAT
i Plecturocebus_hoffmannsi.k141_1595076                 I 1 C 0
s Plecturocebus_miltoni.k141_841561                         10443 33 +    134592 -TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG-CAAAT
i Plecturocebus_miltoni.k141_841561                     I 1 C 0
s Plecturocebus_moloch.k141_890597                          21033 33 -     75465 -TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG-CAAAT
i Plecturocebus_moloch.k141_890597                      I 1 C 0
s Pongo_abelii.NDHI03003816.1                              184920 33 -    373494 -TTC-AGGATACTG--------TCTTG-TCAGCACAA---AG-CAAAT
i Pongo_abelii.NDHI03003816.1                           I 1 C 0
s Pongo_pygmaeus.ctg62                                   19805567 34 +  19899266 CTTC-AGGATACTG--------TCTTG-TCAGCACAA---AG-CAAAT
i Pongo_pygmaeus.ctg62                                  I 740 T 740
s Presbytis_comata.k141_672698                               2963 33 -     15069 -TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG-CAAAT
i Presbytis_comata.k141_672698                          I 1 C 0
s Presbytis_mitrata.k141_860013                              3097 33 +     14865 -TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG-CAAAT
i Presbytis_mitrata.k141_860013                         I 1 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                74268 34 +     78963 TTCC-AAGATACTG--------CTCTC-TCAGCACAA---AC-TCAAT
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6846304 34 +  12164890 CTTC-ACAATACTG--------TCTTG-TCAGCACAA---AG-TAAAT
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    664921 34 -   2312742 NNNN-NNNNNNNNN--------NNNNN-NNNNNNNNN---NN-NNNNN
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         1448 34 +     11805 CTTC-ACAATACTG--------TCTTG-TCAGCACAA---AG-TAAAT
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           40782 34 +     52369 CTTC-ACAATACTG--------TCTTG-TCAGCACAA---AG-TAAAT
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         33171 34 -     44753 CTTC-ACAATACTG--------TATTG-TCAGCACAA---AG-TAAAT
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            15092 34 +     27322 CTTC-ACAATACTG--------TCTTG-TCAGCACAA---AG-TAAAT
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       14731 34 -     53241 CTTC-ACAATACTG--------TCTTG-TCAGCACAA---AG-TAAAT
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         37003 34 -     48185 CTTC-ACAATACTG--------TCTTG-TCAGCACAA---AG-TAAAT
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           31405 34 +     77221 CTCT-AAGATACTG--------CCTTG-TCAGCACAG---CA-TAGAT
i Psammomys_obesus.NESX01026517.1                       I 41 C 0
s Pteronotus_parnellii.KE867983.1                            2197 33 -     27784 CCCC-AAAATACTG--------TCCTG-TCAGCAC-A---AG-TATAT
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        243957 34 -    344369 CCCC-AAGATACTG--------TCTTG-TCAGCACAA---AG-TAAAT
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13244320 34 -  17261082 CCCC-TAGATACTG--------TCCCA-TCAGcacaa---ag-taaat
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             602271 34 -   3946241 CCCC-TAGATACTG--------TCCCG-TCAGcacaa---ag-taaat
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131532045 34 - 161321710 CCCC-AAGATACTG--------TCTTG-TCagcacaa---ag-taaat
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             27092 33 +     56732 -TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG-CAAAT
i Pygathrix_cinerea.k141_374971                         I 1 C 0
s Pygathrix_nigripes_b.ctg79                                 6803583 33 +   6970761 -TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG-CAAAT
i Pygathrix_nigripes_b.ctg79                               I 1 C 0
s Pygathrix_nigripes_a.k141_101123                             2976 33 +     18040 -TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG-CAAAT
i Pygathrix_nigripes_a.k141_101123                        I 1 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                14145 33 +     68503 -CCC-AAGATACTG--------TCCCA-TCAGCACAA---AG-TAAAT
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 1 C 0
s Rattus_norvegicus.chr11                                13913382 23 +  90463843 ------------TG--------TCTTG-TCAGCACAG---TG-TGGAT
i Rattus_norvegicus.chr11                               I 42 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1786141 31 +   2252614 CCCC-AAGATACTG--------TCTTG-TCAGCATAA---CG-TA---
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           13528 34 -     14454 CTTC-AAGATACTG--------TCTTG-TCAGCACAA---AG-CAAAT
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206374855 33 - 206558726 -TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG-CAAAT
i Rhinopithecus_roxellana.NC_044549.1                   I 1 C 0
s Rhinopithecus_strykeri.ctg4                            44852503 33 -  45163003 -TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG-CAAAT
i Rhinopithecus_strykeri.ctg4                           T 2507 I 1252
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                17613 34 +    109198 CCCC-TAGATACTG--------TCCCA-TCAGCACAA---AG-TAAAT
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       5949 34 +     12214 CCCC-AAGATACTG--------TCTTG-TCAGCACAA---AG-TAAAT
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15670493 33 -  43202129 -TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG-CAAAT
i Saimiri_boliviensis.NW_024100938.1                    I 1 C 0
s Saimiri_cassiquiarensis.k141_808270                        2359 33 +     34089 -TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG-CAAAT
i Saimiri_cassiquiarensis.k141_808270                   I 1 C 0
s Saimiri_macrodon.k141_2087127                              2300 33 -     60842 -TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG-CAAAT
i Saimiri_macrodon.k141_2087127                         I 1 C 0
s Saimiri_oerstedii.k141_841116                              2395 33 +     67014 -TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG-CAAAT
i Saimiri_oerstedii.k141_841116                         I 1 C 0
s Saimiri_sciureus.k141_1947592                              2373 33 +     60816 -TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG-CAAAT
i Saimiri_sciureus.k141_1947592                         I 1 C 0
s Saimiri_ustus.k141_1282476                                 2310 33 -     76454 -TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG-CAAAT
i Saimiri_ustus.k141_1282476                            I 1 C 0
s Sapajus_apella.ctg10                                   17339044 33 -  30362882 -TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG-CAAAT
i Sapajus_apella.ctg10                                  I 1 C 0
s Sapajus_macrocephalus.k141_966464                         18419 33 -     62485 -TTC-AAGAGACTG--------TCTTG-TCAGTACAA---AG-CAAAT
i Sapajus_macrocephalus.k141_966464                     I 1 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   29703 34 -    114521 CCCC-AAGATACTG--------TCCTG-TCAGCACAA---AG-TAAAT
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1527475                       25516 34 +     26421 CTTC-AAGATACTG--------TCTTG-TCAGCACAA---AG-CAAAT
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       5977 33 +     20762 -TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG-CAAAT
i Semnopithecus_hypoleucos.k141_761524                  I 1 C 0
s Semnopithecus_johnii.k141_1351450                         39711 34 +     40653 CTTC-AAGATACTG--------TCTTG-TCAGCACAA---AG-CAAAT
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                           10268 34 -     12194 CTTC-AAGATACTG--------TCTTG-TCAGCACAA---AG-CAAAT
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     23690 34 -     27512 CTTC-AAGATACTG--------TCTTG-TCAGCACAA---AG-CAAAT
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         32709 34 -     33692 CTTC-AAGATACTG--------TCTTG-TCAGCACAA---AG-CAAAT
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   97594 34 -    120886 CTGT-AAGATGCTG--------TCTTG-TCAGCACAA---AG-TGGAT
i Sigmodon_hispidus.SigHis_scaffold_11332               I 41 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            16342 34 +    739146 CCCC-AAGATACTG--------TTCTG-TCAGCACAA---AG-TAAAT
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17748553 37 -  27805282 CCCC-AAGATACTG--------CCCTG-TCagcacaaaaaag-taaat
i Sorex_araneus.JH798170.1                              I 6 C 0
s Spermophilus_dauricus.KZ294190.1                        2237832 34 +   2842873 CTCC-AAGAGACTG--------TCTTG-TCAGcacaa---ag-taaat
i Spermophilus_dauricus.KZ294190.1                      I 41 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             232717 34 -    276980 CCCC-AAGATACTG--------TCTTG-TCAGCACAA---AG-TAAAT
i Spilogale_gracilis.SpiGra_flattened_line_905          I 37 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            25285 34 +     62062 CCCC-AAGATACTG--------TCTTG-TCAGCACAA---AG-TAAAT
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189270194 34 + 218635234 CCTC-AAGATACTG--------TCTTG-TCAgcacaa---ag-taaat
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                     13899983 34 +  13920577 CTTC-AAGATACTG--------TCTTG-TCAGCACAA---AG-CAAAT
i Symphalangus_syndactylus.tarseq_24                    I 631 I 71
s Tadarida_brasiliensis.TadBra_scaffold_145589               4140 34 -      6213 CCCC-CAAATACTG--------TCCTG-TCAGCACCA---AG-TAAAT
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               13072 34 +     45698 CTCC-GAGATACTG--------TCCTG-TCAGCACAA---AG-TAAAT
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      805061 34 +   1148477 CCCC-AAGATACTG--------TCGCG-TCAGCACCA---AG-TAAAT
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  55722 34 +     99546 CCCC-AAGATACTG--------TCGCG-TCAGCACCA---AG-TAAAT
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               24376 34 +     42269 CTTC-AAGGCAGTG--------TCTTG-CCAGCACAA---GG-CAAAT
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               57692 34 +     65473 CTTC-AAGGCAGTG--------TCTTG-CCAGCACAA---GG-CAAAT
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194005007 33 - 194193292 -TTT-GAGATACTG--------TCTTG-TCAGCACAA---GG-CAAAT
i Theropithecus_gelada.CM009951.1                       I 1 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             37211 34 -     47444 CTCC-AAGATGCTG--------TCTTG-TCAGCACAA---GG-TAAAT
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         I 25 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  1956 34 +      6782 CTCT-AAGATACTG--------TCCTG-TCAGCAAAA---AG-TAAAT
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  134207 34 -    259118 GCCC-AAAATACCG--------TCCTG-TCAGCACAA---AG-TAAAT
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        24087 33 +     38948 -TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG-CAAAT
i Trachypithecus_auratus.k141_738098                    I 1 C 0
s Trachypithecus_crepusculus.k141_1588528                   17814 33 -     32910 -TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG-CAAAT
i Trachypithecus_crepusculus.k141_1588528               I 1 C 0
s Trachypithecus_cristatus.k141_27198                       23711 34 +     24652 CTTC-AAGATACTG--------TCTTG-TCAGCACAA---AG-CAAAT
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      2589 34 -      3559 CTTC-AAGATACTG--------TCTTG-TCAGCACAA---AG-CAAAT
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           40536 33 -     54611 -TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG-CAAAT
i Trachypithecus_geei.k141_670367                       I 1 C 0
s Trachypithecus_germaini.k141_809503                       16534 34 +     17312 CTTC-AAGATACTG--------TCTTG-TCAGCACAA---AG-CAAAT
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    23897 34 -     25040 CTTC-AAGATACTG--------TCTTG-TCAGCACAA---AG-CAAAT
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          2558 34 +      3528 CTTC-AAGATACTG--------TCTTG-TCAGCACAA---AG-CAAAT
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  48926 33 +     51589 -TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG-CAAAT
i Trachypithecus_leucocephalus.k141_283605              I 1 C 0
s Trachypithecus_melamera.k141_238507                       12102 33 +     14732 -TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG-CAAAT
i Trachypithecus_melamera.k141_238507                   I 1 C 0
s Trachypithecus_obscurus.k141_1115109                       2579 33 -     28054 -TTC-AAGATACTG--------TCTTG-CCAGCACAA---AG-CAAAT
i Trachypithecus_obscurus.k141_1115109                  I 1 C 0
s Trachypithecus_phayrei.ctg3                            44657374 33 -  44834318 -TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG-CAAAT
i Trachypithecus_phayrei.ctg3                           I 1 C 0
s Trachypithecus_pileatus.k141_469329                        2383 34 +      3372 CTTC-AAGATACTG--------TCTTG-TCAGCACAA---AG-CAAAT
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   3550 34 +     90398 CCCC-AAGACACTG--------TCCTG-TCAGCACAA---AG-TAAAG
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16079645 34 +  31416278 TTCC-AAGATACTG--------TCCTG-TCAGCACAA---AG-TAAAT
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2790049 34 -   3938065 ttcc-aaaataCTG--------TCTTG-TCAGCACAA---AG-CAAAT
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    2569 34 +     13056 TTCC-AAAATACTG--------TCTTG-TCAGCACAA---AG-TAAAT
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69311771 34 -  96451834 tttc-aagatACTG--------TCCAG-Tcagcaaaa---ag-taaat
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 24891 34 -     25548 CCCC-AAGATACTG--------TCCTG-TCAGCACAA---AG-GAAAT
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6512509 34 +  28682327 CCCC-AAGATACTG--------TCTTG-TCAGcacaa---ag-taaat
i Ursus_maritimus.KK498671.1                            I 39 C 0
s Varecia_rubra.k141_432109                                  3145 34 -     20643 CTTC-ACAATACTG--------TCTTG-TCAGCACAA---AG-TAAAT
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             22689 34 -     33872 CTTC-ACAATACTG--------TCTTG-TCAGCACAA---AG-TAAAT
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1523003 34 -   2331223 CCGC-AAGATACTG--------TCCTG-TCAgcacaa---ag-taaat
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                135455 34 -    281493 CCCC-AAGATACTG--------TCTTG-TCAGCACAA---AG-TAAAT
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       124930 34 -    134049 CTCC-AAGAGACTG--------TCTTG-TCAGCACAA---AG-TAAAT
i Xerus_inauris.XerIna_scaffold_7898                    I 41 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        211984 34 -    227762 CCCC-AAGATACTG--------TCTTG-TCAGCACAA---AG-TATAT
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     13167 34 -     20485 CTCT-GAGATACTG--------TCTTG-TCAGCACAA---AG-TGGAC
i Zapus_hudsonius.ZapHud_scaffold_64392                 I 39 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           5267 34 -      8775 TTTC-AAGATACTG--------TCCTG-TCAGCAAAA---AG-TAAAT
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Echinops_telfairi.AAIY02274224.1                            507 14 +      1655 I

a score=0.000000
s hg38.chr4_GL000008v2_random                                9663 71 +    209709 AAATTCATCACTGTCAGTTGATATTT-AA-ATTCACAAACT-T---------------------ATAAGCAATAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------G---T-T----A----T
s Acinonyx_jubatus.LLWD01000356.1                         2031739 71 +   3721120 aaattcatcACAGGAAGTTGAGGTTT-AA-ATTCACAAACT-T---------------------GTCAGCAATTa--aatt----a-----------aa------g---tga-t------t----tt-----------------t---t-t----a----c
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    110322 64 -    189883 AAAGTCATCACACTAGGCTGGGATTT-AG-ATTCACAGACT-T---------------------ATCAGCAGTAA--AATT----AG-----------A------GT-A--A-T------T----------------------------------------
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 I 100
s Ailuropoda_melanoleuca.LNAT01000321.1                  10655057 88 +  23371972 aaattcatCACAGGAAGTTGAGATTT-AA-ATTCGGAAACT-T---------------------GTCAGCAATGg--aatt----a-----------aa------g---tga-t------t----tttttttgttttgttttgtt---t-t----a----c
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7091784 83 -  16596857 AAATTCATCACAGGAAGTTGAGATTT-AA-ATTCGGAAACT-T---------------------GTCAGCAACga--aatt----a-----------aa------g---tga-t------t----tttttttgttttgt-----t---t-t----a----c
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   10750 56 -     22067 AAATTCATCACAGTAAGTCGAGACTT-CA-ATTCACAAAAT-G---------------------ATCAGCAGTAA--AATT----A---------------------------------------------------------------------------
i Allactaga_bullata.AllBul_scaffold_70162               C 0 I 7
s Allenopithecus_nigroviridis.k141_3103707                  60680 71 +     61638 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ACCAGCAATAA--AATC----A------------GAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        52488 71 +     53391 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         3213 71 +     72529 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACC-T---------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          2788 71 +      3797 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             7961 71 -     18050 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAATT-T---------------------ATCAGCAATAA--AATC----T------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  9074 71 -     11521 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAATT-T---------------------ATCAGCAATAA--AATC----T------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              8638 71 -     21359 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAATT-T---------------------ATCAGCAATAA--AATC----T------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1856473                                7015 71 +      7227 AAATTCATCACTGTAAGTTGAGATTT-CA-ATTCACAAATT-T---------------------ATCAGCAATAA--AATC----T------------AAGTAC-T-------T------T-----T-----------------A---T-T----A----T
i Alouatta_juara.k141_1856473                           C 0 T 209
s Alouatta_macconnelli.k141_1331706                          7929 71 -     10438 AAATTCATCACTGTAAGTTGAGATTT-CA-ATTCACAAATT-T---------------------ATCAGCAATAA--AATC----T------------AAGTAC-T-------T------T-----T-----------------A---T-T----A----T
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            4585 71 +      7047 AAATTCATCACTGTAAGTTGAGATTT-CA-ATTCACAAATT-T---------------------ATCAGCAATAA--AATC----T------------AAGTAC-T-------T------T-----T-----------------A---T-T----A----T
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             7871 71 +     10410 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAATT-T---------------------ATCAGCAATAA--AATC----T------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            1674 71 -      4927 AAATTCATCACTGTAAGTTGAGATTT-CA-ATTCACAAATT-T---------------------ATCAGCAATAA--AATC----T------------AAGTAC-T-------T------T-----T-----------------A---T-T----A----T
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             4604 71 +      6429 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAATT-T---------------------ATCAGCAATAA--AATC----T------------AAGTAC-T-------T------T-----T-----------------A---T-T----A----T
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3518508 71 +   4113121 AAATGCATCACAGTAAGTTGGGATTT-AA-ATTCTCAAACT-T---------------------atcagcaatga--aatt----a-----------aa------g-tgT---T------T-----T----------------CT---T-T----A----C
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      388679 69 -    631301 AAATCCATCACA-TACATTGAGATTT-TA-ATTTATAAACT-T---------------------ATCAGCAATGA--AATT----A-------A----A------GTGA----T------T-----T-----------------T---T-A----A----C
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            29107 71 +     33004 AAATGCATCACAGTAAGTTGAGATTT-AA-ATTCTCATACT-T---------------------ATCAGCAATGA--AATT----A-------A----A------GTG-T---T------T-----T----------------CT---C-T----A----C
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 60324 71 +     78111 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ATCAGCAATAA--AATC----T------------AAGTAA-T-------C------T-----T-----------------A---T-T----A----T
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            3262 72 +     22701 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-TA--------------------ATCAGCAATAA--AATC----T------------AAGTAT-T-------C------T-----T-----------------A---T-T----A----T
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5747220 71 +   9889416 AAATTCATCACTGTAAGCTGAGATTT-AA-ATTCACAAACT-T---------------------ATCAGCAATAA--AATC----T------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----C
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             3805 71 -    104377 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ATCAGCAATAA--AATC----T------------AAGTAA-T-------C------T-----T-----------------A---T-T----A----T
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               3811 71 +     23246 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ATCAGCAATAA--AATC----T------------AAGTAA-T-------C------T-----T-----------------A---T-T----A----T
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     1827 69 +      5067 AAATTCATCACAGTCCACTGAGATTT-AAAAGGCACAAACT-T---------------------A---GCAGTGA--AATT----A-------A----A------GT-AT---T------TT----T-----------------T---T-T----A----C
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      15774 50 +     17483 ACATTCATCATAGTT----GAGTTTT-AA-ATTTGCAAACT-T---------------------ATCAGCAATAA--AAT---------------------------------------------------------------------------------
i Arctocebus_calabarensis.k141_1161114                  C 0 I 12
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 7075 69 -     29036 AAATTTATCACA-TACATTGAGATTT-AA-ATTTACAAACT-G---------------------ATCAGCAACGA--GATT----A-------A----A------GTGA----T------T-----T-----------------T---T-A----C----C
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9537073 59 +  39197703 AAATTCATCACCGTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ATCAGCAATAA--AATC----T------------AAG------------------------------------------------------------
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             58357 59 +     85812 AAATTCATCACCGTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ATCAGCAATAA--AATC----T------------AAG------------------------------------------------------------
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 9356 59 +     89302 AAATTCATCACCGTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ATCAGCAATAA--AATC----T------------AAG------------------------------------------------------------
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             13861 59 -     58268 AAATTCATCACCGTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ATCAGCAATAA--AATC----T------------AAG------------------------------------------------------------
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             61852 59 +    119057 AAATTCATCACCGTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ATCAGCAATAA--AATC----T------------AAG------------------------------------------------------------
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               3803 59 -     25888 AAATTCATCACCGTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ATCAGCAATAA--AATC----T------------AAG------------------------------------------------------------
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 4555 71 -     16375 AAATTCATCACAGTAAGTTGAGATTT-AA-ATTTGCAAACT-T---------------------ATCAGCAATAA--AATT----A------------AAGTAT-T-------T------T-----T-----------------T---T-T----A----C
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                               875 71 +      2719 AAATTCATCACAGTAAGTTGAGATTT-AA-ATTTGCAAACT-T---------------------ATCAGCAATAA--AATT----A------------AAGTAT-T-------T------T-----T-----------------T---T-T----A----C
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26378522 68 +  51448160 aaattcatcACAGTAAGTTGAGATCT-AA-ATTCTCAAACT-T---------------------AGCAGCAATga--aatt----a-----------aa------g--tgat-t------t-----tt----------------t----------------
i Balaenoptera_acutorostrata.KI537095.1                 C 0 I 3
s Balaenoptera_bonaerensis.DF502048.1                        3753 72 -     13118 aaattcatcACAGTAAGTTGAGATCT-AA-ATTCTCAAACT-T---------------------AGCAGCAATga--aatt----a-----------aa------g--tgat-t------t-----tt----------------t---t-t----a----t
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   41603 71 -     72089 AAATGCATCACAGTAAGTTGAGATTG-AA-ATTCCCAAATT-T---------------------ATCAGCAATGA--AATT----A-------A----A------GTG-T---T------T-----T----------------CT---T-T----G----C
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6557614 71 +   6870073 AAATGCATCACAGTAAGTTGAGATTT-AA-ATTCTCAAACT-T---------------------ATCAGCAATGA--AATC----A-------A----A------GTG-T---T------T-----T----------------CT---T-T----A----C
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138137853 71 - 161108492 NAATGCATCACAGTAAGTTGAGATTT-AA-ATTCTCAAACT-T---------------------atcagcaatga--aatt----a-----------aa------g-tgT---T------T-----T----------------CT---T-T----A----C
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     570227 71 -    998990 AAATGCATCACAGTAAGTTGAGATTT-AA-ATTCTCAAACT-T---------------------Atcagcaatga--aatt----a-----------aa------g-tgT---T------T-----T----------------CT---T-T----A----C
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136293586 71 - 158972876 GAATGCATCACAGTAAGTTGAGATTT-AA-ATTCTCAAACT-T---------------------Atcagcaatga--aatt----a-----------aa------g-tgT---T------T-----T----------------CT---T-T----A----C
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1229342 71 -   1914593 AAGTGCATCACAGTAAGTTGAGATTT-AA-ATTCTCAAACT-T---------------------atcagcaatga--aatt----a-----------aa------g-tgT---T------T-----T----------------CT---T-T----A----C
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               111696 72 -    171031 AAATTCAACACTGTAAATTGAGATTT-AA-ATTCACAAACT-T---------------------ATCCGCAATAA--AATC----T------------AAGTAA-T-------T------TTATTAT-----------------A----------------
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 10722 72 +    125063 AAATTCAACACTGTAAATTGAGATTT-AA-ATTCACAAACT-T---------------------ATCCGCAATAA--AATC----T------------AAGTAA-T-------T------TTATTAT-----------------A----------------
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                12770 72 -    216513 AAATTCAACACTGTAAATTGAGATTT-AA-ATTCACAAACT-T---------------------ATCCGCAATAA--AATC----T------------AAGTAA-T-------T------TTATTAT-----------------A----------------
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        5310 72 -    134917 AAATTCAACACTGTAAATTGAGATTT-AA-ATTCACAAACT-T---------------------ATCCGCAATAA--AATC----T------------AAGTAA-T-------T------TTATTAT-----------------A----------------
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3217927 75 -   8989139 aaatttgtCGCAGTAAGTTAAGATTT-AA-ATTTGCAAACT-T---------------------ATCAGCAATGa--agtt----a-----------aa------g---taa-tttttt-t-----t-----------------t---t-t----a----c
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           395631 76 -  15254737 aaatttgtCGCAGTAAGTTAAGATTT-AA-ATTTGCAAACT-T---------------------ATCAGCAATGa--agtt----a-----------aa------g---taa-tttttttt-----t-----------------t---t-t----a----c
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2971365 75 +   6889770 aaatttgtCGCAGTAAGTTAAGATTT-AA-ATTTGCAAACT-T---------------------ATCAGCAATGa--agtt----a-----------aa------g---taa-tttttt-t-----t-----------------t---t-t----a----c
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11516443 82 +  39901454 AAATTCATCACAGGAAGTTGAGATTT-AA-ATTCGCAAACT-T---------------------GTCAGCAATGA--AATT----A-------A----A------GTGA----T------TT----T------TTTTGTTTTGTT---T-T----A----C
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   11461 82 +     87036 AAATTCATCACAGGAAGTTGAGATTT-AA-ATTCGCAAACT-T---------------------GTCAGCAATGA--AATT----A-------A----A------GTGA----T------TT----T------TTTTGTTTTGTT---T-T----A----C
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11263104 82 -  35597290 aaattcatCACAGGAAGTTGAGATTT-AA-ATTCGCAAACT-T---------------------GTCAGCAATga--aatt----a-----------aa------g---tga-t------t----tttttt-gttttgt-----t---t-t----a----c
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11085633 82 +  39895921 aaattcatCACAGGAAGTTGAGATTT-AA-ATTCGCAAACT-T---------------------GTCAGCAATga--aatt----a-----------aa------g---tga-t------t----tttttt-gttttgt-----t---t-t----a----c
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16452657 82 -  44759192 aaattcatCACAGGAAGTTGAGATTT-AA-ATTCGCAAACT-T---------------------GTCAGCAATga--aatt----a-----------aa------g---tga-t------t----tttttt-gttttgt-----t---t-t----a----c
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21323612 71 + 157394656 AAATGCATCACAGTAAGTTGAGATTT-AA-ATTCTCAAACT-T---------------------atcagcaatga--aatt----a-----------aa------g-tgT---T------T-----T----------------CT---T-C----A----C
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135704839 71 - 157403528 AAATGCATCACAGTAAGTTGAGATTT-AA-ATTCTCAAACT-t---------------------atcagcaatga--aatt----a-----------aa------g-tgT---T------T-----T----------------CT---T-C----A----C
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_1557951                  393 65 +       644 AAATTCATCACAATTAGCTGAGATTT-AA-ATTCACAAACT-T---------------------ATCAGCAATGA--AATT----A-------A----A------GT-A--A-T------T-----T----------------------------------
i Capromys_pilorides.CapPil_scaffold_1557951            C 0 T 224
s Carlito_syrichta.NW_007248099.1                          306927 57 +    345090 AAATTCATCAcagaaaactgaggttt-aa-atTTACAAACT-T---------------------ATCagcaataa--aatt----a------------a--------------------------------------------------------------
i Carlito_syrichta.NW_007248099.1                       C 0 I 8
s Carollia_perspicillata.CarPer_scaffold_4436               57873 69 +     67245 AAATCCATCACA-TACATTGAGATTT-AA-ATTTATAAACT-T---------------------ATCGGCAATGA--GATT----A-------A----A------GTGA----T------T-----T-----------------T---T-A----A----T
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   28359 71 +     33760 AAATTCATCACAGTAAGCTAAGATTT-AA-ATTTGCAAACT-T---------------------ATCAGCAGTGA--AATT----A-------A----A------GTGA----T------T-----T-----------------T---T-T---CC----C
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   157166 33 -    276539 AAATTCATCACAGTAAGTTGAGATTT-AA-ATTCA------------------------------------------------------------------------------------------------------------------------------
i Catagonus_wagneri.CatWag_scaffold_1305                I 3 I 28
s Cavia_aperea.AVPZ01000278.1                            15784534 71 -  24422027 ACATTCATCACAGTAAGATGAGATTT-AA-ATTCACAAACTTT---------------------AGCAGCAGTGA--AATT----A-------A----N------N---NNN-N------N-----N-----------------N---N-N----N----N
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15796466 71 -  24440124 ACATTTATCACAGTAAGATGAGATTT-AA-ATTCACAAACTTT---------------------AGCAGCAGTGa--aatt----a-----------aa------g---taa-t------t-----t-----------------t---t-t----a----t
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       174657 71 +    436027 ACATTTATCACAGTAAGATGAGATTT-AA-ATTCACAAACTTT---------------------AGCAGCAGTGA--AATT----A-------A----A------GT-A--A-T------T-----T-----------------T---T-T----A----T
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18888549 71 -  29618158 AAATTCATCACTGTAACTTGAGATTT-AA-ATTCACAAACT-T---------------------ACCAGCAATAA--AATC----T------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 6093 71 -     26817 AAATTCATCACTGTAACTTGAGATTT-AA-ATTCACAAACT-T---------------------ACCAGCAATAA--AATC----T------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                10333 71 +     25043 AAATTCATCACTGTAACTTGAGATTT-AA-ATTCACAAACT-T---------------------ACCAGCAATAA--AATC----T------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         5963 57 +     21754 AAATTCATCACAGAAAACTGAGGTTT-AA-ATTTGCAGACT-T---------------------ATCAGCAATAA--AATT----A------------A--------------------------------------------------------------
i Cephalopachus_bancanus.k141_702587                    C 0 I 8
s Ceratotherium_simum.JH767818.1                          4361651 86 +   7569818 aaattcatCACAGTAAGTTGAGATTT-AA-ATTCGCAAACT-T---------------------ATCAGCAATga--aatt----a-----------aa------g---tga-t------t--ttttttttt-tttt-t-----ttttt-t----a----c
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         1406 83 -      9338 AAATTCATCACAGTAAGTTGAGATTT-AA-ATTCGCAAACT-T---------------------ATCAGCAATGA--AATT----A-------A----A------GTGA----T------TT-TT-T----------TTTTTTTTTTTT-T----A----C
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6552472 71 +   6739814 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-C---------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      53949 71 -     54931 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-C---------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         18933 71 -     19697 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-C---------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         56464 71 -    107033 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-C---------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        2906 71 -      3853 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----G----T
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          26842 71 +     30494 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----G----T
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           2866 71 -      4022 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----G----T
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          2758 71 -      3505 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           21548 71 +     35983 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11988085 71 +  12117833 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----G----T
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46474838 71 +  46592721 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      32665 71 +     33420 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ACCAGTAATAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        2701 71 -      3443 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----G----T
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      3692 71 -      4669 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ACCGGCAATAA--AATC----A------------AAGTTA-T-------T------T-----T-----------------A---T-T----G----T
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        3487 71 -      4411 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         3017 71 -      4205 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----G----T
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_1070855          1230 65 -      1715 AAATTT-TCA----AAGTTGAGATTT-AA-ATTC--AAACT-T---------------------ACC---GATGA--AAAT----C-------A----A------GTG-----T------T-----T---------------TTT---T-T----TAAAAA
i Chaetophractus_vellerosus.ChaVel_scaffold_1070855     C 0 I 4
s Cheirogaleus_major.k141_1157592                           56860 71 -     68416 AAATTCATCACAGTAAGTTGAGATTT-AA-ATTTGCAAACT-T---------------------ATCAGCAATAA--AATG----A------------AAGTAT-T-------T------T-----T-----------------T---T-T----A----C
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            5902 71 +     13308 AAATTCATCACAGTAAGTTGAGCTTT-AA-ATTTGCAAACT-T---------------------ATCAGCAATAA--AATT----A------------AAGTTT-T-------T------T-----T-----------------T---T-T----A----C
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             3366 71 -     18223 AAATTCATCACCGTAAATTGAGATTT-AA-ATTCACAAACT-T---------------------ATCAGCAATAA--AATC----T------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             20389 71 +     25473 AAATTCATCACCGTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ATCAGCAATAA--AATC----T------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           39428 71 +     57117 AAATTCATCACCGTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ATCAGCAATAA--AATC----T------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          44103 71 +     54541 AAATTCATCACCGTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ATCAGCAATAA--AATC----T------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15959699 70 +  43084221 ACATTCATCACAGCAAGCTGAGATTT-AA-GTTCACAAACT-T---------------------ATCAGCAGtga--aatt----a-----------aa------g---taa-t------t-----t-----------------t---t-t----a----c
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         68918 72 +    196370 AAATTCATCACTATAAATTGAGATTT-AA-ATTCACAAACT-T---------------------ATCCACAATAA--AATC----T------------AAGTAA-T-------T------TTATTGT-----------------A----------------
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          13098 72 +     40510 AAATTCATCACTATAAATTGAGATTT-AA-ATTCACAAACT-T---------------------ATCCACAATAA--AATC----T------------AAGTAA-T-------T------TTATTGT-----------------A----------------
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15136299 71 -  15256731 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      31345 71 -     53260 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101141794 71 + 101219884 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                14830 61 -     21363 AAATTT-TCACAGTAAGTTGAAATTT-AA-ATTCACAAACT-T---------------------ATC---AATTA--AATT----C-------A----A------GTGA----T------T-----T----------------------------------
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 I 4
s Choloepus_hoffmanni.KN194586.1                           760141 61 +    964067 aaattt-tcacagtaagttaaaattt-aa-attcacAAACT-T---------------------ATC---AATTA--AATT----C-------A----A------GTGA----T------T-----T----------------------------------
i Choloepus_hoffmanni.KN194586.1                        C 0 I 4
s Chrysochloris_asiatica.ChrAsi_scaffold_141308              6941 55 -     12508 GTGTTCATCACAGTAAGTTGAAATAC-AA-ATTTGAAAACT-T---------------------ATTAGCAATAA--AAGT--------------------------------------------------------------------------------
i Chrysochloris_asiatica.ChrAsi_scaffold_141308         C 0 I 7
s Colobus_angolensis.KN985967.1                          10880373 71 +  10971483 GAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147661531 71 + 156195979 GAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            13518 71 +     23629 GAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60611131 68 +  78930452 aaattcatcACAGTAAGTTGagattt-aa-atttgaaaact-t---------------------atCAGCAATGA--AATT----A-------A----A------GT-A--AGT------T-----T-----------------T---T------------
i Condylura_cristata.JH655880.1                         C 0 I 1
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         37588 73 -     40477 AAATTCATCAGAGTACGTTGAGATTT-AA-ATGCACAAACT-T---------------------AGCAGCAATGA--AATT----A-------A----A------ATGA----T-----TT-----C-----------------T---T-T----AAA--C
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 275411 63 -    399297 AAAGTCATCACATTATGTTGAGAT-T-AA-ATTCACAGATT-T---------------------GTCAGCAGTAA--AATT----AG-----------A------GT-A--A-T------T----------------------------------------
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 I 5
s Cricetulus_griseus.LT883672.1                          53026943 64 +  72327488 AAAGTCATCACAGTATGATGGGATTT-AG-ATTCACAGACT-T---------------------ACCAGCAgtaa--aatt----a-----------ga------a---taa-t------t----------------------------------------
i Cricetulus_griseus.LT883672.1                         C 0 I 5
s Crocidura_indochinensis.CroInd_scaffold_38409             18067 39 -     19186 AAATTTATCACAATAAGTTGAATTTT-AA-ATTTAAAAACT------------------------------------------------------------------------------------------------------------------------
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 I 24
s Cryptoprocta_ferox.CryFer_flattened_line_19014            49751 72 -     70449 AAATTCATCACAGGAAGCTGAGATTT-AA-ATTCACAAACT-T---------------------GTCAGCAATGA--AATT----A-------A----A------GT-A--A-T------TT-T--T-----------------T---T-T----A----C
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  206108 62 -    956709 AAATTCATCACAGCAAGCTGAGATCT-AA-ATTC--AAACT-T---------------------ATCAGCAGTGA--AATT----A-------A----A------GT-A--G-T------T----------------------------------------
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 I 5
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 28478 70 -     67205 AAATTCATCACAGTAAGTTGGGATTT-AA-ATTCACAAACT-T---------------------ATCAGCAACAA--AATT----A-------A----A------G-GA--A-T------C-----T-----------------T---T-T----G----C
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                15306 70 +     26546 ACATTCATCACAGTAAGCTGAGATTT-AA-ATTCACAAACT-T---------------------ATCAGCAGTGA--AATT----A-------A----A------GT-A--A-T------T-----T-----------------T---T-T----A----T
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             56789 70 -    236241 ACATTCATCACAGTAAGCTGAAATTT-AA-ATTCACAAACT-T---------------------ATCAGCAGTGA--AATT----A-------A----A------GT-A--A-T------T-----T-----------------T---T-T----A----T
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          180040 61 -   6883506 aaattt-tca----aagttGAGATTT-AA-ATTCACAAACT-T---------------------ATT---GATGA--Aaat----c-----------aa------g----tg-t------t-----t-----------------t---t-t----t----a
i Dasypus_novemcinctus.JH568778.1                       C 0 I 4
s Daubentonia_madagascariensis.ctg11                     16842728 49 +  31942871 AAATACATCACAGTAAGTTGAGATTT-AA-ATTTGCAAACT-T---------------------ATCAGTAAT----------------------------------------------------------------------------------------
i Daubentonia_madagascariensis.ctg11                    C 0 I 9
s Delphinapterus_leucas.KZ290064.1                       80035206 73 -  96802777 aaattcatcACAGTAAGTTGAGATCT-AA-ATTCTCAAACT-T---------------------ATcagcaatgaaaaatt----a-----------aa------g--tgat-t------t-----t-----------------t---t-t----a----t
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18697183 69 -  18957592 AAACTCATCACA-TACATTGagattt-aa-atttataaact-t---------------------atCAGCAATGA--GAGT----A-------A----A------GTGA----T------T-----T-----------------T---G-A----A----C
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 320309 76 +    993696 AAATTCATCACAGTAAGTTGAGATTT-AA-ATTCGCAAACT-T---------------------ATCAGCAATGa--aatt----a-----------aa------g---tga-t------t--tttt-----------------ttttt-t----a----c
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                    953 83 +    151128 AAATTCATCACAGTAAGTTGAGATTT-AA-ATTCGCAAACT-T---------------------ATCAGCAATGA--AATT----A-------A----A------GTGA----T------TT-TT-T----------TTTTTTTTTTTT-T----A----C
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   155582 70 +    228994 ACATTCATCACAGTAAGCTGAGATTT-AA-ATTCACAAACT-T---------------------ATCAGCAATGA--AATT----A-------A----A------GT-A--A-T------T-----T-----------------T---T-T----A----C
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3653330 49 +   4240102 AAATTCATCAGAGAAAGCTAAGATTT-AA-ATTCACAATCT-A---------------------ACCAT-----A--AAT---------------------------------------------------------------------------------
i Dipodomys_ordii.KN672545.1                            C 0 I 6
s Dipodomys_stephensi.DipSte_scaffold_44365                 24882 49 +     28912 AAATTCATCAGAGAAAGCTAAGATTT-AA-ATTCACAATCT-A---------------------ACCAT-----A--AAT---------------------------------------------------------------------------------
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 I 6
s Dolichotis_patagonum.DolPat_scaffold_14102                34050 70 -     73477 ACATTCATCACAGTAAGATGAGATTT-AA-ATTCACAAACT-T---------------------ATAAGCAGTGA--AATT----A-------A----A------GT-A--A-T------T-----T-----------------T---T-T----A----T
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Eidolon_helvum.KE772537.1                                 10556 58 +     24177 aaattcatCACAGAATGTTGAGATTT-AA-ATTCACAAACT-T---------------------TTCagcaatta--aatt----a-----------aa--------------------------------------------------------------
i Eidolon_helvum.KE772537.1                             C 0 I 13
s Elaphurus_davidianus.JRFZ01086400.1                     1489870 71 +   1727528 AAATTCATCACAGTAGGTTGAGATTT-AA-ATTCTCAAACT-T---------------------ATcagcaatga--aatt----a-----------aa------g-tgT---T------T-----T----------------CT---T-T----A----C
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7804622 69 +  15467074 AAATTCATCACAGTAAGTTGAGATAT-AA-ACTTGAAAGCT-T---------------------ATCAACACTGA--AATT----GG-----------A------GTGA----T------T-----T-----------------T---T-T----T-----
i Elephantulus_edwardii.JH947210.1                      C 0 I 2
s Ellobius_lutescens.LOEQ01003611.1                        237601 64 -    369425 AAAGTCATTATAGTATACTGGGGTTT-AG-ATTCACAGCCT-T---------------------ATCAGCAGTAA--AATT----AG-----------G------GT-A--A-T------T----------------------------------------
i Ellobius_lutescens.LOEQ01003611.1                     C 0 I 5
s Ellobius_talpinus.LOJH01090055.1                           4614 64 -      7838 AAAGTCATTATAGTATGCTGAGGTTT-AG-ATTCACAGACT-T---------------------ATCAGCAGTAA--AATT----AG-----------G------GT-A--A-T------T----------------------------------------
i Ellobius_talpinus.LOJH01090055.1                      C 0 I 5
s Enhydra_lutris.KZ291749.1                              85869516 83 +  99434291 aaattcatCACAGGAAGTTGAGATTT-AA-ATTAGGAAAGT-T---------------------GTCAGCAATga--aatt----a-----------aa------g---tga-t------t----tttttttgttttgt-----t---t-t----a----c
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4702143 59 +   6522550 AAATTCATCACAGCATGTAAAGATTT-AA-ATTTACAAAGT-T---------------------ACCAGCAATGA--AATT----A-------A----A------G-------------------------------------------------------
i Eptesicus_fuscus.JH977687.1                           C 0 I 10
s Equus_asinus.JREZ01000062.1                             5851044 73 -   7175178 aaattcaTCACAGTGAGTTGAGATTT-AA-ATTCGCAAACT-T---------------------ATCAGCAATGa--aatt----a-----------aa------g---tga-t------t--tttt-----------------t---t-t----a----c
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13349546 74 +  41866177 AAATTCATCACAGTGAGTTGAGATTT-AA-ATTCGCAAACT-T---------------------ATCAGCAATGa--aatt----a-----------aa------g---tga-t------t-ttttt-----------------t---t-t----a----c
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          11036 74 +     92910 AAATTCATCACAGTGAGTTGAGATTT-AA-ATTCGCAAACT-T---------------------ATCAGCAATGa--aatt----a-----------aa------g---tga-t------t-ttttt-----------------t---t-t----a----c
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11530833 71 +  16010500 CAACTCATCACAGTTAGTTGAGATTT-CA-ATCTGAAAACT-T---------------------ATCAACAGTGA--aatt----a-----------ca------g---tgt-t------t----tt-----------------t---t-t----t----t
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48768477 71 -  48907691 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          313408 72 +    330699 AAATTCATCACAGTAAGTTGAGATCT-AA-ATTCTCAAACT-T---------------------AGCAGCAATGA--AATT----A-------A----A------GTGAT---T------T-----T----------------TT---T-A----A----T
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             59838 73 +     89355 AAATTCATCACAGTAAGTTGAGATCT-AA-ATTCTCAAACT-T---------------------AGCAGCAATGA--AATT----A-------A----A------GTGAT---T------T-----T---------------TTT---T-T----A----T
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              2907 66 +     13586 AAATTCATCACAGTAAGTTGAGATTT-AA-ATTTGCAAACT-T---------------------ATCAGCAATAA--AATT----A------------AAGTAT-T-------T------T-----T----------------------------------
i Eulemur_albifrons.k141_715837                         C 0 I 4
s Eulemur_collaris.k141_311830                               2842 66 -      6809 AAATTCATCACAGTAAGTTGAGATTT-AA-ATTTGCAAACT-T---------------------ATCAGCAATAA--AATT----A------------AAGTAT-T-------T------T-----T----------------------------------
i Eulemur_collaris.k141_311830                          C 0 I 4
s Eulemur_coronatus.k141_3240342                             9318 66 +     36558 AAATTCATCACAGTAAGTTGAGATTT-AA-ATTTGCAAACT-T---------------------ATCAGCAATAA--AATT----A------------AAGTAT-T-------T------T-----T----------------------------------
i Eulemur_coronatus.k141_3240342                        C 0 I 4
s Eulemur_flavifrons.k141_903901                             5632 66 +     60246 AAATTCATCACAGTAAGTTGAGATTT-AA-ATTTGCAAACT-T---------------------ATCAGCAATAA--AATT----A------------AAGTAT-T-------T------T-----T----------------------------------
i Eulemur_flavifrons.k141_903901                        C 0 I 4
s Eulemur_fulvus.k141_653297                                 9115 66 +    109717 AAATTCATCACAGTAAGTTGAGATTT-AA-ATTTGCAAACT-T---------------------ATCAGCAATAA--AATT----A------------AAGTAT-T-------T------T-----T----------------------------------
i Eulemur_fulvus.k141_653297                            C 0 I 4
s Eulemur_macaco.k141_1341545                               13494 66 +     16540 AAATTCATCACAGTAAGTTGAGATTT-AA-ATTTGCAAACT-T---------------------ATCAGCAATAA--AATT----A------------AAGTAT-T-------T------T-----T----------------------------------
i Eulemur_macaco.k141_1341545                           C 0 I 4
s Eulemur_mongoz.k141_825972                                13770 66 +     27497 AAATTCATCACAGTAAGTTGAGATTT-AA-ATTTGCAAACT-T---------------------ATCAGCAATAA--AATT----A------------AAGTAT-T-------T------T-----T----------------------------------
i Eulemur_mongoz.k141_825972                            C 0 I 4
s Eulemur_rubriventer.k141_411740                           16236 66 +     26808 AAATTCATCACAGTAAGTTGAGATTT-AA-ATTTGCAAACT-T---------------------ATCAGCAATAA--AATT----A------------AAGTAT-T-------T------T-----T----------------------------------
i Eulemur_rubriventer.k141_411740                       C 0 I 4
s Eulemur_rufus.k141_1620292                                30960 66 +     46535 AAATTCATCACAGTAAGTTGAGATTT-AA-ATTTGCAAACT-T---------------------ATCAGCAATAA--AATT----A------------AAGTAT-T-------T------T-----T----------------------------------
i Eulemur_rufus.k141_1620292                            C 0 I 4
s Eulemur_sanfordi.k141_186399                              13683 66 -     29447 AAATTCATCACAGTAAGTTGAGATTT-AA-ATTTGCAAACT-T---------------------ATCAGCAATAA--AATT----A------------AAGTAT-T-------T------T-----T----------------------------------
i Eulemur_sanfordi.k141_186399                          C 0 I 4
s Felis_catus.CM001386.2                                129890715 71 - 159252932 aaattcatCACAGGAAGTTGAGGTTT-AA-ATTCACAAACT-T---------------------GTCAGCAATGa--aatt----a-----------aa------g---tga-t------t----tt-----------------t---t-t----a----c
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129277790 67 - 158578461 aaattcatcAC----AGTTGAGGTTT-AA-ATTCACAAACT-T---------------------GTCAGCAATGa--aatt----a-----------aa------g---tga-t------t----tt-----------------t---t-t----a----c
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 18925 71 +     52776 AAATTCATCACAGGAAGTTGAGGTTT-AA-ATTCACAAACT-T---------------------GTCAGCAATGA--AATT----A-------A----A------GTGA----T------TT----T-----------------T---T-T----A----C
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13890647 64 -  19261668 ACATTCATCACAGTAAGCTGAGATTT-AA-ATTCACAAACT-T---------------------ATCAGCAGtga--aatt----a-----------aa------g---taa-a------t----------------------------------------
i Fukomys_damarensis.KN123630.1                         C 0 I 5
s Galago_moholi.ctg555                                     208825 54 -    847004 ACATTTGTCACAGTTAGTTGAGTTTT-AA-ATTTGCAAACT-T---------------------ATCAGCAATAA--AAT---------------------------------------------------------------------------------
i Galago_moholi.ctg555                                  C 0 I 12
s Galago_senegalensis.k141_964197                           11206 54 -     43889 ACATTTGTCACAGTTAGTTGAGTTTT-AA-ATTTGCAAACT-T---------------------ATCAGCAATAA--AAT---------------------------------------------------------------------------------
i Galago_senegalensis.k141_964197                       C 0 I 12
s Galagoides_demidoff.k141_1769638                           8270 54 +     27357 ACATTCACCACAGTTAGTTGAGTTTT-TA-ATTTGCAAACT-T---------------------ATCAGCAATAA--AAT---------------------------------------------------------------------------------
i Galagoides_demidoff.k141_1769638                      C 0 I 12
s Galeopterus_variegatus.GalVar_scaffold_354               154185 56 +    324696 AAATTCATCACAGTAAGCTGAGATTT-AA-ATTTGAAAACT-T---------------------ATCAGCAATAA--AATT----A---------------------------------------------------------------------------
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 I 9
s Giraffa_tippelskirchi.LVKQ01S012154.1                    179385 56 -    189561 AAATGCATCACAGTAAGTTGAGATTT-AA-ATTCTCAAACT-T---------------------ATCAGCGATGA--AATT----A---------------------------------------------------------------------------
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 I 15
s Glis_glis.GliGli_scaffold_79770                           10592 56 -     18683 AAATTCATCACAGTAAGCAGAGATTT-AA-ATGCACAAAGT-T---------------------ATCAGCAGCGA--AATT----A---------------------------------------------------------------------------
i Glis_glis.GliGli_scaffold_79770                       C 0 I 9
s Gorilla_beringei.k141_111300                               3065 67 -     14630 AAATTCAT----GAAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ATCAGCAATAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119650164 67 - 195582420 AAATTCAT----GAAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ATCAGCAATAA--AATc----a------------aagtaa-t-------t------t-----t-----------------a---t-t----a----t
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   75121 56 +    118900 AAATTCATCACAGTAAGCAGAGATTT-AA-ATGCACAAACT-T---------------------ATCAGCAGAGA--AATT----A---------------------------------------------------------------------------
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 I 11
s Hapalemur_alaotrensis.k141_1198205                         3467 66 +      3980 AAATTCATCACAGTAAGTTGAGATTT-AA-ATTTGCAAACT-T---------------------ATCAGCAATAA--AATT----A------------AAGTAT-T-------T------T-----T----------------------------------
i Hapalemur_alaotrensis.k141_1198205                    C 0 I 4
s Hapalemur_gilberti.k141_97962                             25942 71 +     26611 AAATTCATCACAGTAAGTTGAGATTT-AA-ATTTGCAAACT-T---------------------ATCAGCAATAA--AATT----A------------AAGTAT-T-------T------T-----T-----------------T---T-T----A----C
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             3404 38 +     56096 AAATTCATCACAGTAAGTTGAGATTT-AA-ATTTGCAAAC-------------------------------------------------------------------------------------------------------------------------
i Hapalemur_griseus.k141_1387522                        C 0 I 31
s Hapalemur_meridionalis.k141_186231                        26679 71 -     42470 AAATTCATCACAGTAAGTTGAGATTT-AA-ATTTGCAAACT-T---------------------ATCAGCAATAA--AATT----A------------AAGTAT-T-------T------T-----T-----------------T---T-T----A----C
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        43273 71 -     54384 AAATTCATCACAGTAAGTTGAGATTT-AA-ATTTGCAAACT-T---------------------ATCAGCAATAA--AATT----A------------AAGTAT-T-------T------T-----T-----------------T---T-T----A----C
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              14960 72 +     53719 AAATTCATCACAGGAAACTAAGATTT-AA-ATTCACAAACT-T---------------------GTCAGCAATGA--AATT----A-------A----A------GTGA----T------TT-T--T-----------------T---T-T----A----C
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                25884 71 -     91191 AAATGTATCACAGTAAGTTGAGATTT-AA-ATTCTCAAACT-T---------------------ATCAGCAATGA--AATT----A-------A----A------GTG-T---T------T-----T----------------CT---T-T----A----C
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2549033 64 +  31725842 ACATTCATCACAGTAAGCTCAGTTTT-AA-ATTCACAAACT-T---------------------AGCAGCAGtga--aatt----a-----------aa------a---tga-g------t----------------------------------------
i Heterocephalus_glaber.JH602058.1                      C 0 I 5
s Heterohyrax_brucei.HetBruBak_scaffold_25354               54438 65 +     73687 AAATTCATCAT-GTTAGGTGAGATAT-AC-ATTTGCAAACT-T---------------------ATCAGCAATGA--AATT----C-------A----A------GTGA----A------T-----T-----------------T----------------
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 I 5
s Hippopotamus_amphibius.HipAmp_scaffold_1308              145449 71 +    277961 AAATTCATCACAGTAAGCTGAGATTT-AA-ATTCACAAACT-T---------------------ATCAGCAATAA--AATT----A-------A----A------GTGAT---A------T-----T-----------------T---T-T----A----C
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      276788 76 -    477199 aaattcaTCACAGTATGTTGAGattt-aa-attcacaaact-t---------------------aacaGCGATGa--aatt----a-----------aa------g---tga-t------t-----t-----------------t---t-ttttaa--aac
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              5946 76 -      9143 AAATTCATCATAGTATGTTGAGATTT-AA-ATTCACAAACT-T---------------------AACAGTGATGA--AATT----A-------A----A------GTG-T---T------T-----T-----------------T---T-TTTAAAAA--C
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      2324 71 -   7690867 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ATCAGCAACAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Hoolock_leuconedys.ctg79                                 I 1726 I 10
s Hyaena_hyaena.HyaHya_flattened_line_20729                 14013 74 -     67322 AAATTCATCACAGGAAGCTGAGATTT-AA-ATTCACAAACT-T---------------------GTCAGCAGTGA--AATT----A-------A----A------GTGA----T------TT-TTTT-----------------T---T-T----A----C
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16951 70 -    119109 ACATTCATCATAGTAAGATGAGATTT-AA-ATTCACAAACT-G---------------------ATCAGCAGTAA--AATT----A-------A----T------GT-A--A-T------T-----T-----------------T---T-T----A----T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              2882 71 +      5897 AAATTCATCAATGTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ATCAGCAACAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_1485652                              1303 71 -      1697 AAATTCATCAATGTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ATCAGCAACAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Hylobates_agilis.k141_1485652                         C 0 C 0
s Hylobates_klossii.k141_466549                              9327 71 +     11537 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ATCAGCAACAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14622428 71 -  25970782 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ATCAGCAACAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1133650                            2317 71 -      2775 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ATCAGCAACAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             30922 70 -     60944 -AATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ATCAGCAACAA--AATC----A------------AAgtaa-t-------t------t-----t-----------------a---t-t----a----t
i Hylobates_pileatus_a.tarseq_592                         I 1 I 894
s Hystrix_cristata.HysCri_scaffold_50788                     4083 70 +     22540 ACATTCATCACAGTAAGCTGAGATTT-AG-ATTCACAAACT-T---------------------ATGAGCAGTGA--AATT----A-------A----A------GT-A--A-T------T-----T-----------------T---T-T----A----C
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7123950 71 +  13083262 aaattcatCACAGTCCACTGAGATTT-AA-ATTCACAAACT-T---------------------ATCAGCAGtga--aatt----a-----------aa------g---taa-t------t----tt-----------------t---t-t----a----c
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_1884019                                   1143 74 -      2196 AAGTTCATCACAGTAAGTTGAGATTT-AA-ATTTGCAAACT-T---------------------ATCAGCAATAA--AATT----A------------AAGTAT-T-------T------T-----T--------------TTTT---T-T----A----C
i Indri_indri.k141_1884019                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               7195 71 +     17520 AAATTCATCACAGTAAGTTGATATCT-AA-ATTCTCAAACT-T---------------------ATCAGCAATGAAAAATT----A-------A----A------GTGAT---T------T-----T-----------------T---T-T----------
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 I 1
s Jaculus_jaculus.JH725517.1                              8563490 56 +  11848649 AAATTCATCACAGTAAGTCAAGACTT-AA-TTTCACAAAAT-G---------------------ATCAGCAGTAA--GATT----A---------------------------------------------------------------------------
i Jaculus_jaculus.JH725517.1                            C 0 I 7
s Kogia_breviceps.KogBre_flattened_line_35920               22021 71 +     37189 AAATTCATCACAGTAAGTTGAGATCT-AA-ATTCTCAAACT-T---------------------ATCAGCAATGA--AATT----A-------A----A------GTGAT---T------T-----T-----------------T---T-C----A----T
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          47927 68 -    147782 AAATTCATCACCGTAAGTTGAGATTT-AA-ATTCACAAACC-T---------------------CTCAGCAATAA--AATC----T------------AAGTAA-T-------T------T-----T-----------------A---T------------
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   111937 59 -    115756 AAATTCATCACAGTATGTAAAGATTT-AA-ATTTACAAACT-T---------------------GCCAGGAATGA--AATT----A-------A----A------A-------------------------------------------------------
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 I 10
s Lemur_catta.scaffold_1                                258404962 71 - 285822530 AAATTCATCACAGTAAGTTGAGATTT-AA-ATTTGCAAACT-T---------------------ATCAGCAATAA--AATT----A------------AAGTAT-T-------T------T-----T-----------------T---T-T----A----C
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        21834 64 +     39228 AGATTCATCACAGTAAGTTGAGATTT-AA-ATTTGCAAACT-T---------------------GTCAGCAATAA--AATT----A------------AAGT-T-T-------T------T----------------------------------------
i Lepilemur_ankaranensis.k141_884009                    C 0 I 5
s Lepilemur_dorsalis.k141_134267                            51207 71 +     63517 AGATTCATCACAGTAAGTTGAAATTT-AA-ATTTGCAAATT-T---------------------GTCAGCAATAA--AATT----A------------AAGTAT-T-------T------T-----T-----------------T---T-T----A----C
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        76449 72 +    116806 AGATTCATCACAGTAAGTTGAGATTT-AA-ATTTGCAAACT-T---------------------GTCAGCAATAA--AATT----A------------AAGCAT-T-------T------T-----T----------------TT---T-T----A----C
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     29472 70 -     33031 AGATTCATCACAGTAAGTTGAGATTT-AA-ATTTGCAAACT-T---------------------GTCAGCAATAA--AATT----A------------AAGT-T-T-------T------T-----T-----------------T---T-T----A----C
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3083728 83 -   3498232 aaattcaTCACAGGAAGTTGAGATTT-AA-AATCGGAAACT-T---------------------GTCAGCAATga--aatt----a-----------aa------g---tga-t------t----tttttttgttttgt-----t---t-t----a----c
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    10938 71 +     22452 GAATTCATCACAATAACTTGAGACTT-AA-ATTCACTAACT-T---------------------GTTGGCAATGA--AATTAAAGT-------A----A------T-------T------T-----T-----------------T---A-T----A----C
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            134353 74 +   3060487 aaattcatcACAGTAAGTTGAGATCT-AA-ATTCTCAAACT-T---------------------ATcagcaatgaaaaatt----a-----------aa------g--tgat-t------t-----t-----------------t---t-a---aa----t
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19245560 71 +  19376315 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-C---------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            8577 54 +     84689 ACATTCATCACAGTCCGTTGAGTTTT-AA-ATTTGCAAACT-T---------------------ATCAGCAATAA--AAT---------------------------------------------------------------------------------
i Loris_lydekkerianus.k141_550999                       C 0 I 5
s Loris_tardigradus.ctg97                                 3776328 54 +   6799190 ACATTCATCACAGTCCATTGAGTTTT-AA-ATTTGCAAACT-T---------------------ATCAGCAATAA--AAT---------------------------------------------------------------------------------
i Loris_tardigradus.ctg97                               C 0 I 5
s Loxodonta_africana.GL010040.1                          20589215 73 -  62548349 AAATTCATCACAGTAAGTTGAGATAC-AA-ATTTGCAAACT-T---------------------ATCAGCAATGA--aatt----a-----------aa------g---tga-t------t-----t-----------------t---t-tttt-t----t
i Loxodonta_africana.GL010040.1                         C 0 I 4
s Lycaon_pictus.CM007556.1                               11085089 82 +  39895028 aaattcatCACAGGAAGCTGAGATTT-AA-ATTCGCAAACT-T---------------------GTCAGCAATga--aatt----a-----------aa------g---tga-t------t----tttttt-gttttgt-----t---t-t----a----c
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             17246 71 +     74745 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------G-----T-----------------A---T-T----A----T
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12703752 71 +  12821369 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------G-----T-----------------A---T-T----A----T
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               5848 71 +      6569 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------G-----T-----------------A---T-T----A----T
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           44150 71 +     63263 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------G-----T-----------------A---T-T----A----T
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_925451                                  158 71 +     10231 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------G-----T-----------------A---T-T----A----T
i Macaca_fuscata.k119_925451                            I 26 C 0
s Macaca_leonina.k141_3421209                                2299 71 +      3017 ACATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------G-----T-----------------A---T-T----A----T
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_mulatta.NC_041755.1                            196032829 71 + 196197964 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------G-----T-----------------A---T-T----A----T
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11442935 71 +  11645122 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------G-----T-----------------A---T-T----A----T
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_radiata.k141_1580474                                2689 71 -      3617 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------G-----T-----------------A---T-T----A----T
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 13021 71 -     55006 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------G-----T-----------------A---T-T----A----T
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43838058 71 +  43892939 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------G-----T-----------------A---T-T----A----T
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                5280 71 -      5978 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------G-----T-----------------A---T-T----A----C
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                699974 71 +    802869 AAATTCATCACAGTATGTTGAGATTT-AA-ATTCACAAACT-T----------------------TCAGCAATTA--AAGT----A-------A----A------GTGA----T------A-----T-----------------T---T-T----AAA--C
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43434720 71 -  43563597 AAATTCATCACTGTAAGCTGAGATTT-AA-ATTCACAAACT-C---------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4447546 71 -   4543643 AAATTCATCACTGTAAGCTGAGATTT-AA-ATTCACAAACT-C---------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            144466 69 +    252755 AGGCCCACCACAGTAAGCTGAGATTT-AA-ATTCACAAAct-t---------------------tccagcaatga--aatt----a-----------aa------g---taa-t------t----tt-----------------t---t-t----------
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             34538 69 +     58827 AGGCTCATCACAGTAAGCTGAGATTT-AA-ATTCACAAACt-t---------------------tccagcaatga--aatt----a-----------aa------g---taa-t------t----tt-----------------t---t-t----------
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36871790 56 +  64221397 aaattcatCACAGTCCACTGAGATTT-AA-ATTCACAAACT-T---------------------ATCAgcagtga--aatt----a---------------------------------------------------------------------------
i Marmota_marmota.CZRN01000005.1                        C 0 I 10
s Megaderma_lyra.MegLyr_scaffold_3562                       62628 76 -    234502 AAATTCATCACAGTATGTTGAGATTT-AT-ATTCACAAACT-T---------------------ATCAGCAGTGA--AATG----A-------A----A------CTGATTA-T-----TT-----T-----------------T---T-T----AAA--C
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_146202             327 82 -      1999 AAATTCATCACAGGAAGTTGAGATTT-AA-ATTCGGAAACT-T---------------------GTCAGCAACGA--AATT----A-------A----A------GTGA----T------TT----T------TTTTGTTTTGTT---T-T----A----C
i Mellivora_capensis.MelCap_flattened_line_146202       C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233                9900 64 +     15977 AAACTCATCACACTATGCTGGGATGT-AG-ATACACAGACT-T---------------------ATCAGCAGTAA--AATC----AG-----------A------GT-A--A-T------T----------------------------------------
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 I 5
s Mesocricetus_auratus.KB708139.1                         1044683 64 -  26018355 AAAGTCATCACAGTATGTAGGGATTT-AG-ATTCACAAACA-C---------------------AGGAGCAGTAA--AATT----AG-----------G------AT-A--A-T------T----------------------------------------
i Mesocricetus_auratus.KB708139.1                       C 0 I 4
s Mesoplodon_bidens.MesBid_scaffold_183284                   2065 72 +      2166 AAATTCATCACAGTAAGTTGAGATCT-AA-ATTCTCAAACT-T---------------------ATCAGCAATGA--AATT----A-------A----A------GTGAT---T------T-----T-----------------T---T-A---AA----T
i Mesoplodon_bidens.MesBid_scaffold_183284              C 0 C 0
s Microcebus_murinus.CM007691.1                          16508082 71 +  47401472 AAATTCATCACAGTAAGTTGAGATTT-AA-ATTTGCAAACT-T---------------------ATcagcaataa--aatt----a------------aagtat-t-------t------t-----t-----------------t---t-t----a----c
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  29351 70 -     48017 CAATTCCTCACTGCAAGTTGGGATAC-AC-AAGTGCAAACT-T---------------------CTCAACAATGA--AATT----A-------A----A------GTGA----T------T-----T-----------------T---T-G----T----G
i Microgale_talazaci.MicTal_scaffold_34660              C 0 I 6
s Micronycteris_hirsuta.MicHir_scaffold_37978               21050 69 -     32043 AAATTCATCACA-TACATTGAGATTT-AA-ATTAATAAACT-T---------------------ATCAGCAATGA--AATT----A-------A----A------GTGA----T------T-----T-----------------T---T-A----A----C
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22817801 64 -  98408828 AAAGTCATTATAGAATGTTGGGGTTT-AG-ATTCACAGACT-T---------------------ATCAGCAGTAA--AATT----A-T----------G------GT-A--A-T------T----------------------------------------
i Microtus_ochrogaster.CM001673.1                       C 0 I 5
s Miniopterus_natalensis.LDJU01000022.1                   8207809 71 +  10048721 AAATTCATCACAGAGGGTTGAGATTT-AA-GTTTACAAACT-T---------------------ACCAGCAATga--aatt----a-----------aa------g--tgat-t------t-----t-----------------t---t-c----A----C
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            32480 72 +     45743 AAATTCATCACAGTGCGTTGAGACTT-AA-GTTTATAAACT-T---------------------ACCGGCAATGA--AATT----A-------A----A------GTGAT---T------TT----T-----------------T---T-C----A----C
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        33379 71 +     34273 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         9033 84 -    104932 AAATTCATCACAGGAAGTTGAGATTT-AA-AATCGGAAACT-T---------------------GTCAGCAATGA--AATT----A-------A----A------GTGA----T------TT----T----TTTTTTGTTTTGTT---T-T----A----C
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     3487 71 +      8497 AAATTCATCACAGTAAGTTGAGATTT-AA-ATTTGCAAACT-T---------------------ATCAGCAATAA--AATT----A------------AAGTAT-T-------T------T-----T-----------------T---T-T----A----C
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 144790 67 +    154973 AAATTCATCACAGTAAGTTGAGATCT-AA-ATTCTCAAACT-T---------------------ATCAGCAATGAAAAATT----A-------A----A------GTGAT---T------T----------------------------------------
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 I 5
s Mormoops_blainvillei.MorMeg_scaffold_2952                159560 70 +    265003 AAATTCATCACA-TACGCTGAGATTT-AA-ATTTACAAACT-T---------------------AACAGCAATGA--AATT----A-------A----A------GTGA----T------T-----T-----------------T---TCA----A----C
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 2972 71 -      4346 AAATGCATCAGAGTAAGTTGAGATTT-AA-ATTCTCAAATT-T---------------------ATCAGCAATGA--AATC----A-------A----A------GTG-T---T------T-----T----------------CT---T-T----A----C
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  142653 72 -    168139 AAATTCATCACAGTAAGCTGAGATTT-AA-ATTCACAAACT-T---------------------GTCAGCAATGA--AATT----A-------A----A------GTGA----T------TT-T--T-----------------T---T-T----A----C
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          17451 59 -    100666 AAATTCATCACAGCATGTCAAGATTT-AA-ATTTATAAACT-T---------------------ACCAGCAATGA--AATT----A-------A----A------G-------------------------------------------------------
i Murina_feae.MurFea_scaffold_2254                      C 0 I 10
s Mus_caroli.LT608236.1                                  70764314 63 +  92629107 AAAGTCATCACAGTATGCTGGAATTT-GG-ATTCTCAGACT-T---------------------ATCAGT-GTAA--AATT----AG-----------A------GT-A--A-T------T----------------------------------------
i Mus_caroli.LT608236.1                                 C 0 I 5
s Mus_musculus.chr16                                     75487351 63 +  98207768 AAAGTCATCATAGTATGCTGGAATTT-GG-AGTCTCAGACT-T---------------------ATCTGT-GTAA--AATT----AG-----------A------GT-A--A-T------T----------------------------------------
i Mus_musculus.chr16                                    C 0 I 5
s Mus_pahari.LT608305.1                                  67553522 64 +  89017189 AAAGTCATCACACTATGCTGGGATTT-GG-AGTCTCAGAGT-T---------------------ATCAGCAGTAA--AATT----AG-----------A------GT-A--A-T------T----------------------------------------
i Mus_pahari.LT608305.1                                 C 0 I 5
s Mus_spretus.CM004110.1                                 74328532 63 +  97876770 AAAGTCATCATAGTATGCTGGAATTT-GG-AGTCTCAGACA-T---------------------ATCAGT-GTAA--AATT----AG-----------A------GT-A--A-T------T----------------------------------------
i Mus_spretus.CM004110.1                                C 0 I 5
s Muscardinus_avellanarius.MusAve_scaffold_9643              9075 56 +     98495 AAATTCATCACAGTAAGTGGAGATCT-AA-GTGCACAAACT-T---------------------ATCAGCAGTGA--AATT----A---------------------------------------------------------------------------
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 I 10
s Mustela_putorius.JH417978.1                             4421898 59 -  28371801 aaattcatCACAGGAAGTTGAGATTT-AA-ATTCGGAAACT-T---------------------GTCAGCAATGa--aatt----a-----------aa------g-------------------------------------------------------
i Mustela_putorius.JH417978.1                           C 0 I 24
s Myocastor_coypus.MyoCoy_scaffold_3653                     88028 50 -    117718 AAATTCATCACAGTGAGCTGAGATTT-AA-ATTCGCAAACT-T---------------------ATCAGCAATG---------------------------------------------------------------------------------------
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               965772 59 +   8389877 AAATTCATCACAGCATGTCAAGATTT-AA-ATTTACAAACT-T---------------------ACCAGCAATGA--AATT----A-------A----A------G-------------------------------------------------------
i Myotis_brandtii.KE161952.1                            C 0 I 10
s Myotis_davidii.KB114863.1                               5017463 59 +   6462685 AAATTCATCACAGCATGTCAAGATTT-AA-ATTTACAAACT-T---------------------ACCAGCAATGA--AATT----A-------A----A------G-------------------------------------------------------
i Myotis_davidii.KB114863.1                             C 0 I 10
s Myotis_lucifugus.GL429887.1                             3463359 59 -   3747815 AAATTCATCACAGCATGTCAAGATTT-AA-ATTTACAAACT-T---------------------ACCAGCAATGA--AATT----A-------A----A------G-------------------------------------------------------
i Myotis_lucifugus.GL429887.1                           C 0 I 10
s Myotis_myotis.MyoMyo_scaffold_6123                         8554 59 +     66751 AAATTCATCACAGCATGTCAAGATTT-AA-ATTTACAAACT-T---------------------ACCAGCAATGA--AATT----A-------A----A------G-------------------------------------------------------
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 I 10
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3432 84 -      8794 ACATTT-TCACAGTAACTTGAGATTT-AA-ATTCACAAACT-TA-TTAA-TTAAAGTGATTTTTATC---AATTA--AATT----A-------A----A------GTGA----T------T-----T-----------------T---T-T----T-----
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 I 2
s Nannospalax_galili.KL201303.1                            108410 64 +    362372 AAATTCATCACAGTAAGCTGAGATTT-AA-ATTCACAAACT-T---------------------------AGTAA--AATT----A-------A----A------GT--T-A-A------C-----T-----------------T---T-T----A----C
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               5758 72 +     48152 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-TA--------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4482632 84 -  14209539 aaattcaTCACAGGAAGTTGAGATTT-AA-AATCGGAAACT-T---------------------GTCAGCAATGA--AATt----a-----------aa------g---tga-t------t----ttt----gttttgttttgtt---t-t----a----c
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3949402 73 -   4490290 aaattcatcACAGTAAGTTGAGATCT-AA-ATTCTCAAACT-T---------------------ATcagcaatgaaaaatt----a-----------aa------g--tgat-t------t-----t-----------------t---t-t----a----t
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  47676 69 +     94413 C-ATTCATCACG-TACATTGAGATTT-AA-ATTTACAAACT-T---------------------ACAAGCAATGA--AATT----A-------A----A------GTGA----T------T-----T----------------TT---T-A----A----C
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1439838                            630 71 +      3718 AAATTCATCACTATAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ATCAGCAACAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Nomascus_annamensis.k141_1439838                      C 0 C 0
s Nomascus_concolor.k141_49591                                853 71 +      2014 AAATTCATCACTATAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ATCAGCAACAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Nomascus_concolor.k141_49591                          C 0 C 0
s Nomascus_gabriellae.k141_906566                            2181 71 -      2544 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ATCAGCAACAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             22657 71 -  18771707 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ATCAGCAACAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                   406 71 +      4512 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ATCAGCAACAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Nomascus_siki_a.k141_595747                             T 702 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                28082 82 +   3668941 aaattcatCACAGGAAGTTGAGATTT-AA-ATTCGCAAACT-T---------------------GTCAGCAATga--aatt----a-----------aa------g---tga-t------t----tttttt-gttttgt-----t---t-t----a----c
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65564923 54 -  95554990 ACATTCATCACAGTCGGTTGAGTTTT-AA-ATTTGCAAACT-T---------------------ATCAGCAATAA--AAT---------------------------------------------------------------------------------
i Nycticebus_bengalensis.LG16                           C 0 I 5
s Nycticebus_coucang.k141_2051882                            1768 54 +      6470 ACATTCATCACAGTCGGTTGAGTTTT-AA-ATTTGCAAACT-T---------------------ATCAGCAATAA--AAT---------------------------------------------------------------------------------
i Nycticebus_coucang.k141_2051882                       C 0 I 5
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65667293 54 +  89412551 ACATTCATCACAGTCGGTTGAGTTTT-AA-ATTTGCAAACT-T---------------------ATCAGCAATAA--AAT---------------------------------------------------------------------------------
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 I 5
s Ochotona_princeps.JH802095.1                            4993911 49 -  23139505 GACTT-ACCATAATAATTTGAGAATT-AA-ATTCATTGACT-T--T----T-------------ATTATCAG-----------------------------------------------------------------------------------------
i Ochotona_princeps.JH802095.1                          C 0 I 11
s Octodon_degus.JH651621.1                                3683500 70 +  10294119 aaattcatcacAGTAAGCTGAGATTT-AA-ATTCAAAAACT-T---------------------ATCAGCaagaa--aatt----a-----------aa------g---gaa-t------t-----t-----------------t---t-t----t----c
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             677288 84 -   3126709 AAATTCATCACAGGAAGTTGAGATTT-AA-ATTCGGAAACT-T---------------------GTCAGCAATGA--AATt----a-----------aa------g---tga-t------t----ttt----gttttgttttgtt---t-t----a----c
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1078100 71 +   1425656 aaatgcatCACAGTAGGTTGAGATTT-AA-ATTCTCAAACT-T---------------------ATCAGCAGTGA--AATT----A-------A----A------GTG-T---T------T-----T----------------CT---T-T----A----C
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         35255 71 +     78940 AAATGCATCACAGTAAGTTGAGATTT-AA-ATTCTCAAACT-T---------------------ATCAGCGATGA--AATT----AG-----------A------GTG-T---T------T-----T----------------CT---T-T----A----C
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  123075 64 +    145789 AAAGTCATTATAGTATGCTGGGGTTT-AG-ATTCACAGACT-T---------------------ATCAGCAGTAA--AATT----AG-----------T------GT-A--A-T------T----------------------------------------
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 I 5
s Onychomys_torridus.OnyTor_scaffold_12578                  34831 63 +     62360 AAAGTCATTACAGTAT-CTGGGATTT-AG-ATTCACAGATT-T---------------------ATCCGCAGTAA--AATT----AG-----------T------GT-AT---T------T----------------------------------------
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 I 5
s Orcinus_orca.KB316965.1                                 7223086 73 -   7562323 aaattcatCACAGTAAGTTGAGATCT-AA-ATTCTCAAACT-T---------------------ACcagcaatgaaaaatt----a-----------aa------g--tgat-t------t-----t-----------------t---t-t----a----t
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              41471 70 -     66828 AAATTCATCACAGTAAGCTAAGACAT-AA-ATTTGCAAACT-T---------------------ATCAGCATTGA--AATT----A-------A----A------GTCA----T------T-----T-----------------T---T-T----T----A
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 I 4
s Oryctolagus_cuniculus.CM000803.1                      141873596 71 + 163896628 GAATTCATCACAGTAACTTGAGCCTT-AA-ATTCACTAACT-T---------------------ATTGGCAATga--aattaaagt-----------aa------t-------t------t-----t-----------------t---a-t----a----c
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      305421 82 -    505867 aaattcatCACAGGAAGTTGAGATTT-AA-ATTCGCAAACT-T---------------------GTCAGCAATga--aatt----a-----------aa------g---tga-t------t----tttttt-gttttgt-----t---t-t----a----c
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       36913 54 +     38679 ACATTCATCACAGTTAGTTGAGTTTT-AA-ATTTGCAAACT-T---------------------ATCAGCAATAA--AAT---------------------------------------------------------------------------------
i Otolemur_crassicaudatus.k141_321880                   C 0 I 12
s Otolemur_garnettii.GL873528.1                          18006355 54 -  38779656 acattcatcacagtTAGTTGAgtttt-aa-atttgcaaact-t---------------------atcagcaataa--aat---------------------------------------------------------------------------------
i Otolemur_garnettii.GL873528.1                         C 0 I 12
s Ovis_aries.CM001582.2                                 134075677 71 - 275406953 aaatgtatCACAGTAAGTTGAGATTT-AA-ATTCTCAAACT-T---------------------atcagcaatga--aatt----a-----------aa------g-tgT---T------T-----T----------------CT---T-T----A----C
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      76891 71 +    140051 AAATGTATCACAGTAAGTTGAGATTT-AA-ATTCTCAAACT-T---------------------ATCAGCAATGA--AATT----A-------A----A------GTG-T---T------T-----T----------------CT---T-T----A----C
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127572409 61 - 205426864 AAATTCAT----GAAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ATCAGCAATAA--AATC----A------------AAGTAA-T-------T------T----------------------------------------
i Pan_paniscus.CM003386.1                               C 0 I 6
s Pan_troglodytes.KZ622857.1                               325392 71 +    772158 AAATTCATCACTGTCAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ATAAGCAATAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Pan_troglodytes.KZ622857.1                            I 801 I 81
s Panthera_onca.PanOnc_flattened_line_1615                  32116 72 +    295523 AAATTCATCACAGGAAGTTGAGGTTT-AA-ATTCACAAACT-T---------------------GTCAGCAATGA--AATT----A-------A----A------GTGA----T------TT-T--T-----------------T---T-T----A----C
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3635849 73 +  18214204 aaattcatcACAGGAAGTTGAGGTTT-AA-ATTCACAAACT-T---------------------GTCAGCAATga--aatt----a-----------aa------g---tga-t------t--tttt-----------------t---t-t----a----c
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5025497 72 -   6340057 aaattcatcACAGGAAGTTGAGGTTT-AA-ATTCACAAACT-T---------------------GTCAGCAATGa--aatt----a-----------aa------g---tga-t------t---ttt-----------------t---t-t----a----c
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1064538 71 -   1292953 AAATGCATCACAGTAAGTTGAGATTT-AA-ATTCTCAAACT-T---------------------ATCAGcaatga--aatg----a-----------aa------g---tgt-t------t-----t----------------CT---T-T----A----C
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188153504 71 - 188283584 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-C---------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            49716 71 +     76494 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-C---------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47510901 71 +  47705337 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-C---------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 64878 71 -    104429 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-C---------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  14669 71 -     29451 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-C---------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                35072 71 +     35859 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-C---------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113416 71 -    135482 AAATTCATCACAGGAAGTTGAGATGT-AA-ATTCACAAACT-T---------------------GTCAGCAATGA--AATT----A-------A----A------GTGA----T------TT----T-----------------T---T-T----A----C
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           2967 50 -     23713 ACATTCATCACAGTT----GAGTTTT-AA-ATTTGCAAACT-T---------------------ATCAGCAATAA--AAT---------------------------------------------------------------------------------
i Perodicticus_ibeanus.k141_117958                      C 0 I 12
s Perodicticus_potto.k141_713187                            22266 50 -     27972 ACATTCATCACAGTT----GAGTTTT-AA-ATTTGCAAACT-T---------------------ATCAGCAATAA--AAT---------------------------------------------------------------------------------
i Perodicticus_potto.k141_713187                        C 0 I 12
s Perognathus_longimembris.PerPac_flattened_line_22291      40883 51 -     45160 GAATTCATCAGAGTAAGCTAAGATGT-AA-ACTAACAATCT-T---------------------ATCAG-----A--AATT----A---------------------------------------------------------------------------
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 I 8
s Peromyscus_maniculatus.KI615518.1                       4948007 63 -   8017169 AAAGTCATCACAGTGT-CTGGGATTT-AG-ATTCACAGACT-T---------------------ATCAGCAGTAA--AATT----AG-----------T------GT-AT---A------T----------------------------------------
i Peromyscus_maniculatus.KI615518.1                     C 0 I 5
s Petromus_typicus.PetTyp_scaffold_33007                    10188 64 -     36578 ACATTTATCATAGTAAACTGAGATTT-AA-ATTTGCAAACT-T---------------------ATCAGCATTGA--AATT----A-------A----A------GT-A--A-T------T----------------------------------------
i Petromus_typicus.PetTyp_scaffold_33007                C 0 I 7
s Phocoena_phocoena.PhoPho_flattened_line_11948            119703 73 -    122454 AAATTCATCACAGTAAGTTGAGATCT-AA-ATTCTCAAACT-T---------------------ATCAGCAATGAAAAATT----A-------A----A------GTGAT---T------T-----T-----------------T---T-T----A----T
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           2762 71 -      3310 GAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       22667 71 -     82327 GAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACA-T---------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           19414 71 +     19957 GAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26737428 71 +  26888534 GAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            95224 57 +    112873 AAATTCATCACAGCTTGTA--GATTT-AA-ATTTACAAACT-T---------------------ACCAGCAATGA--AATT----A-------A----A------G-------------------------------------------------------
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 I 10
s Pithecia_albicans.k141_991845                             41410 67 -     61926 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAGCT-T---------------------ATCCGCAATAA--AATC----T------------AAGTAA-T-------T------T-----T-----------------A----------------
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        22839 67 +     78826 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ATCCGCAATAA--AATC----T------------AAGTAA-T-------T------T-----T-----------------A----------------
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              6790 67 -     15800 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ATCCGCAATAA--AATC----T------------AAGTAA-T-------T------T-----T-----------------A----------------
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                         9988 67 -     16101 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ATCCGCAATAA--AATC----T------------AAGTAA-T-------T------T-----T-----------------A----------------
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          3297 67 +      9673 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ATCCGCAATAA--AATC----T------------AAGTAA-T-------T------T-----T-----------------A----------------
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13472291 67 -  19735023 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ATCCGCAATAA--AATC----T------------AAGTAA-T-------T------T-----T-----------------A----------------
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           11199 67 -     31692 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ATCCGCAATAA--AATC----T------------AAGTAA-T-------T------T-----T-----------------A----------------
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           3771 71 +     21690 AAATTCATCACAGTAAGTTGAGATCT-AA-ATTCTCAAACT-T---------------------ATCAGCAATGA--AATT----A-------A----A------GTGAT---T------T-----T-----------------T---T-T----A----T
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       20631 71 +     44506 AAATTCATCACCATAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ATCAGCAATAA--AATC----T------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        20841 71 +     67491 AAATTCATCACCGTAAGTTGAGATTT-AA-ATTCACGAACT-T---------------------ATCAGCAATAA--AATC----T------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      11082 71 -     98129 AAATTCATCACCGTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ACCAGCAATAA--AATC----T------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     20687 71 +    147771 AAATTCATCACCATAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ATCAGCAATAA--AATC----T------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        20937 71 -     23762 AAATTCATCACCGTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ATCAGCAATAA--AATC----T------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          1403 71 -     55515 AAATTCATCACCGTAAGTTGAGATTT-AA-ATTCACGAACT-T---------------------ATCAGCAATAA--AATC----T------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         20756 71 +    152463 AAATTCATCACCATAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ATCAGCAATAA--AATC----T------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      7516 71 +      8943 AAATTCATCACCGTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ATCAGCAATAA--AATC----T------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                         10476 71 +    134592 AAATTCATCACCATAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ATCAGCAATAA--AATC----T------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          21066 71 -     75465 AAATTCATCACCATAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ATCAGCAATAA--AATC----T------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              184953 71 -    373494 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ATCAGCAATAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19804861 71 +  19899266 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ATCAGCAATAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Pongo_pygmaeus.ctg62                                  T 740 C 0
s Presbytis_comata.k141_672698                               2996 72 -     15069 AAACTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-TA--------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              3130 72 +     14865 AAACTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-TA--------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                74302 65 +     78963 AAATTCATCAT-GTTAGGTGAGATAT-AC-ATTTGCAAACT-T---------------------ATCAGCAATGA--AATT----C-------A----A------GTGA----A------T-----T-----------------T----------------
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 I 5
s Prolemur_simus.MPIZ01000048.1                           6846338 71 +  12164890 AAATTCATCACAGTAAGTTGAGATTT-AA-ATTTGCAAACT-T---------------------ATCCgcaataa--aatt----a------------aagtat-t-------t------t-----t-----------------t---t-t----a----c
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    664955 71 -   2312742 NNNNNNNNNNNNNNNNNNNNNNNNNN-NN-NNNNNNNNNNN-N---------------------NNNNNNNNNNN--NNNN----N------------NNNNNN-N-------N------N-----N-----------------N---N-N----N----N
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         1482 63 +     11805 AAATTCATCACAGTAAGTTGAGATTT-AA-ATTTGCAAATT-T---------------------ATCAGCAATAA--AATT----A------------AAGTAT-T-------------------------------------------------------
i Propithecus_coronatus.k141_1353159                    C 0 I 7
s Propithecus_diadema.k141_577245                           40816 71 +     52369 AAATTCATCACAGTAAGTTGAGATTT-AA-ATTTGCAAATT-T---------------------ATCAGCAATAA--AATT----A------------AAGTAT-T-------T------T-----T-----------------T---T-T----A----C
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         33205 71 -     44753 AAATTCATCACAGTAAGTTGAGATTT-AA-ATTTGCAAATT-T---------------------ATCAGCAATAA--AATT----A------------AAGTAT-T-------T------T-----T-----------------T---T-T----A----C
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            15126 71 +     27322 AAATTCATCACAGTAAGTTGAGATTT-AA-ATTTGCAAATT-T---------------------ATCAGCAATAA--AATT----A------------AAGTAT-T-------T------T-----T-----------------T---T-T----A----C
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       14765 71 -     53241 AAATTCATCACAGTAAGTTGAGATTT-AA-ATTTGCAAATT-T---------------------ATCAGCAATAA--AATT----A------------AAGTAT-T-------T------T-----T-----------------T---T-T----A----C
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         37037 68 -     48185 AAATTCATCACAGTAAGTTGAGATTT-AA-ATTTGCAAATT-T---------------------ATCAGCAATAA--AATT----A------------AAGTAT-T-------T------T-----T-----------------T---T------------
i Propithecus_verreauxi.k141_158021                     C 0 I 2
s Psammomys_obesus.NESX01026517.1                           31439 64 +     77221 AAAGTCATCACACCATGCTGGGATGT-AG-ATACACAGACT-T---------------------ATCAGCACTAA--AATC----AG-----------A------GT-A--A-T------T----------------------------------------
i Psammomys_obesus.NESX01026517.1                       C 0 I 5
s Pteronotus_parnellii.KE867983.1                            2230 69 -     27784 AAATTCATCACA-TATATTGAGATTT-AA-ATTTACAAACT-T---------------------ATCAGCAATta--aatt----a-----------aa------g---tga-t------t-----t-----------------t---t-a----a----c
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        243991 85 -    344369 AAATTCATCACAAGAAGTTGAGATTT-AA-ATTCAGAAACT-T---------------------GTCAGCAACGA--AATT----A-------A----A------GTGA----T------TT----T---TTTTTTTGTTTTGTT---T-T----A----C
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13244354 74 -  17261082 aaattcatCACAGTGTGTTGAGATTT-AA-ATTCACAAACT-T---------------------TTCAGCAATta--aatt----a-----------aa------g---tga-t------t-----ttt---------------t---t-t----a--aac
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             602305 73 -   3946241 aaattcatCACAGTGTGTTGAGATTT-AA-ATTCACAAACT-T---------------------TTcagcaatta--aatt----a-----------aa------a---tga-t------t-----tt----------------t---t-t----a--aac
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131532079 71 - 161321710 aaatccaTCACAGGAAGTTGAGGTTT-AA-ATTCACAAACT-T---------------------GTCAGCAATga--aatt----a-----------aa------g---tga-t------t----tt-----------------t---t-t----a----c
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             27125 72 +     56732 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-TA--------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6803616 72 +   6970761 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-TA--------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             3009 72 +     18040 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-TA--------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                14178 71 +     68503 AAATGCATCACAGTAGGTTGAGATTT-AA-ATTCTCAAACT-T---------------------ATCAGCAGTGA--AATT----A-------A----A------GTG-T---T------T-----T----------------CT---T-T----A----C
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13913405 65 +  90463843 AAAGTCATCACACTCTGCGGGGATTTTCT-AGTCTCAGACT-T---------------------ATCAGCAGTAA--AATT----AG-----------A------GTCA----T------T----------------------------------------
i Rattus_norvegicus.chr11                               C 0 I 5
s Rhinolophus_sinicus.LVEH01000179.1                      1786172 67 +   2252614 -AATTCATCACAGTATGTTGAGattt-aa-attcacaaact-t---------------------aacaGCAAtga--aatt----a-----------aa------g---tgt-t------t-----t-----------------t---t-t----------
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 I 3
s Rhinopithecus_bieti.k119_102124                           13562 72 -     14454 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-TA--------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206374888 72 - 206558726 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-TA--------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44853788 72 -  45163003 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-TA--------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Rhinopithecus_strykeri.ctg4                           I 1252 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                17647 39 +    109198 AAATTCATCACAGTATGTTGAGATTT-AA-ATTCACAAACT------------------------------------------------------------------------------------------------------------------------
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 I 32
s Saiga_tatarica.SaiTat_scaffold_82192                       5983 71 +     12214 AAATGCATCACAGTAAGTTGAGATTT-AA-ATTCTCAAACT-T---------------------ATCAGCAATGA--AATT----A-------A----A------GTG-T---T------T-----T----------------CT---T-T----A----C
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15670526 71 -  43202129 AAATTCATCACTTTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ATCAGCAATAA--AATC----T------------AAGTAA-T-------T------T-----T-----------------A---T-T----G----T
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        2392 71 +     34089 AAATTCATCACTTTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ATCAGCAATAA--AATC----T------------AAGTAA-T-------T------T-----T-----------------A---T-G----G----T
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              2333 71 -     60842 AAATTCATCACTTTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ATCAGCAATAA--AATC----T------------AAGTAA-T-------T------T-----T-----------------A---T-G----G----T
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              2428 71 +     67014 AAATTCATCACTTTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ATCAGCAATAA--AATC----T------------AAGTAA-T-------T------T-----T-----------------A---T-G----G----T
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              2406 71 +     60816 AAATTCATCACTTTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ATCAGCAATAA--AATC----T------------AAGTAA-T-------T------T-----T-----------------A---T-G----G----T
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 2343 71 -     76454 AAATTCATCACTTTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ATCAGCAATAA--AATC----T------------AAGTAA-T-------T------T-----T-----------------A---T-G----G----T
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17339077 71 -  30362882 AAATTCATCACTGTAACTTGAGATTT-AA-ATTCACAAACT-T---------------------ACCAGCAATAA--AATC----T------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         18452 71 -     62485 AAATTCATCACTGTAACTTGAGATTT-AA-ATTCACAAACT-T---------------------ACCAGCAATAA--AATC----T------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   29737 71 -    114521 AAATAAATCACAGTAAGTTGAGATTT-AA-ATTTGAAAACT-T---------------------ATCAGCAATGA--AATT----A-------A----A------GTGA--G-G------T-----T-----------------T---T-T----A----A
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1527475                       25550 72 +     26421 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-TA--------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       6010 72 +     20762 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-TA--------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         39745 72 +     40653 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-TA--------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                           10302 72 -     12194 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-TA--------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     23724 72 -     27512 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-TA--------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         32743 72 -     33692 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-TA--------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   97628 64 -    120886 AAAGTCATCACAGCATGCTGGGATAT-AG-ATTCACAGACT-T---------------------ATCGACAGTAA--AATT----AG-----------A------GT-A--A-T------T----------------------------------------
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 I 5
s Solenodon_paradoxus.SolPar_flattened_line_1012            16376 70 +    739146 AAATTCATCTCAGTAAGTTAAGATTT-AA-ATTCACAAAGT-T---------------------ATCACCATTGA--AATT----G-------A----A------GTGA----T------T-----T-----------------T---T-T----A----A
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17748590 56 -  27805282 aaattcatCACAGTaagttgaaattt-aa-atttgCAGACT-A---------------------ATCAGCAATGA--AAAT----A---------------------------------------------------------------------------
i Sorex_araneus.JH798170.1                              C 0 I 12
s Spermophilus_dauricus.KZ294190.1                        2237866 71 +   2842873 aaattcatCACAGTCCACTGAGATTT-AA-ATTCACAAACT-T---------------------ATCAGCAGtga--aatt----a-----------aa------g---taa-t------t----tt-----------------t---t-t----a----c
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             232751 82 -    276980 AAATTCATCACAGGAAGTTGAGATTT-AA-ATTCGGAAACT-T---------------------GTCAGCAATGA--AATT----A-------A----A------GTGA----T------TT----T------TTTTGTTTTGTT---T-T----A----C
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            25319 73 +     62062 AAATTCATCACAGGAAGCTGAGATTT-AA-ATTCACAAACT-T---------------------GTCAGCAATGA--AATT----A-------A----A------GTGA----T------T-ATT-T-----------------T---T-T----A----C
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189270228 74 + 218635234 aaattcatCACATTAAGTCGAGATTT-AA-ATTTGCAAACT-TA--------------------ATCAGCAATGA--Aatt----a-----------aa------g---tga-t------t-----t-----------------ttctt-t----a----c
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        12680 71 -  13920577 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ATCAGCAACAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Symphalangus_syndactylus.tarseq_24                    T 707 I 17
s Tadarida_brasiliensis.TadBra_scaffold_145589               4174 72 -      6213 AAATTCATCACAGTGCACTGAGATTT-AA-ATTTACAAACT-T---------------------ACCAGAAATAA--AATT----A-------A----A------GTGAAT--T------T-----T-----------------T---T-T----A----C
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 I 11
s Tamandua_tetradactyla.TamTet_scaffold_26877               13106 86 +     45698 ACATTT-TGACAGTAAGTTGAGATTT-AA-ATTCACAAACT-TAATCAAATTAAAGTGATTTTTATC---AATTA--AATT----A-------A----A------GTGA----T------T-----T-----------------T---T-T----T-----
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 I 2
s Tapirus_indicus.TapInd_scaffold_176                      805095 73 +   1148477 AAATTCATCACAGTAAATTGAGATTT-AA-ATTTGCAAACT-T---------------------ATCAGCAGTGA--AATT----A-------A----A------GTGA----T------AT-TT-T-----------------T---T-T----A----C
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  55756 64 +     99546 AAATTCATCACGGTAAATTGAGATTT-AA-ATTTGCAAACT-T---------------------AACAGCAGTGA--AATT----A-------A----A------GTGA----T------A----------------------------------------
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 I 8
s Tarsius_lariang.k141_609102                               24410 57 +     42269 AAATTCATCACAGAAAACTGAGGTTT-AA-ATTCGCAAACT-T---------------------ATCAGCAATAA--AATT----A------------A--------------------------------------------------------------
i Tarsius_lariang.k141_609102                           C 0 I 8
s Tarsius_wallacei.k141_48636                               57726 57 +     65473 AAATTCATCACAGAAAACTGAGGTTT-AA-ATTCGCAAACT-T---------------------ATCAGCAATAA--AATT----A------------A--------------------------------------------------------------
i Tarsius_wallacei.k141_48636                           C 0 I 8
s Theropithecus_gelada.CM009951.1                       194005040 71 - 194193292 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-C---------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------G-----T-----------------A---T-T----A----T
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             37245 64 -     47444 ACATTCATCACAGTAAAATGAGATCT-AA-CTTTACAAACT-T---------------------ATCAGCATTGA--GATT----A-------A----A------GT-A--A-T------C----------------------------------------
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 I 5
s Tolypeutes_matacus.TolMat_scaffold_269431                  1990 62 +      6782 AAATTT-TCA----AAGTTGAGATTT-AA-ATTCACAAACT-T---------------------ATC---GATGA--AAAT----C-------A----A------GTG-----T------G-----T---------------TTT---T-T----T-----
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  134241 37 -    259118 AAATCCATCACA-TATATTGAGATTT-AA-ATTTATAAAC-------------------------------------------------------------------------------------------------------------------------
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 I 30
s Trachypithecus_auratus.k141_738098                        24120 72 +     38948 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-TA--------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   17847 72 -     32910 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-TA--------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       23745 72 +     24652 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-TA--------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      2623 72 -      3559 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-TA--------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           40569 68 -     54611 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-TA--------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A----------------
i Trachypithecus_geei.k141_670367                       C 0 I 3
s Trachypithecus_germaini.k141_809503                       16568 72 +     17312 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-TA--------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    23931 72 -     25040 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-TA--------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          2592 72 +      3528 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-TA--------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  48959 72 +     51589 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-TA--------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       12135 72 +     14732 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-TA--------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       2612 72 -     28054 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-TA--------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44657407 72 -  44834318 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-TA--------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        2417 72 +      3372 AAATTCATCACTGTAAGTTGAGATTT-AA-ATTCACAAACT-TA--------------------ACCAGCAATAA--AATC----A------------AAGTAA-T-------T------T-----T-----------------A---T-T----A----T
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   3584 70 +     90398 AAATGCACCACAGTACTTTGAGATTT-AA-ATTCTCAAACT-T---------------------ATCAGCCATGA--AATT----A-------A----T------GTGA----T------T-----T-----------------T---T-T----A----C
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16079679 74 +  31416278 AAATTCATCACAGTAAGTTGAGATAT-AA-ATTTGCAAACT-T---------------------ATCAGCaatga--aatt----a-----------aa------a---tga-t------t-----t-----------------t---t-tttttt----t
i Trichechus_manatus.JH594618.1                         C 0 I 4
s Tupaia_chinensis.KB320831.1                             2790083 58 -   3938065 AAATTCATCACAGTAACTCAAGATTT-AA-ATTTCCAAGCT-T---------------------ATCTacactga--aatt----a------------a------t-------------------------------------------------------
i Tupaia_chinensis.KB320831.1                           C 0 I 6
s Tupaia_tana.TupTan_flattened_line_68454                    2603 58 +     13056 AAATTCATCACAGTAAGTCAAGATTT-AA-ATTTCCAGGCT-T---------------------ATCTGCAATGA--AATT----A------------A------T-------------------------------------------------------
i Tupaia_tana.TupTan_flattened_line_68454               C 0 I 6
s Tursiops_truncatus.MRVK01000923.1                      69311805 70 -  96451834 aaattcatcACAGTAAGTTGAGATCT-AA-ATTCTCAAACT-T---------------------ACcagcaatgaaaaatt----a-----------aa------g--tgat-t------t-----t-----------------t---t------------
i Tursiops_truncatus.MRVK01000923.1                     C 0 I 1
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 24925 79 -     25548 AAATTCA---CAGTAAGTTGAGATTC-AA-ATCTGAAAACT-T---------------------ATCAGCAATGA--AATT----AGTTTTTTAAAAGA------TT-AT-C-T------T-----T-----------------T---T-T----T----A
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6512543 88 +  28682327 aaattcaTCACAGGAAGTTGAGATTT-AA-ATTCGGAAACT-T---------------------GTCAGCAATGg--aatt----a-----------aa------g---tga-t------t----tttttttgttttgttttgtt---t-t----a----c
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  3179 71 -     20643 AAATTCATCACAGCAAGTTGAGATTT-AA-ATTTGCAAACT-T---------------------ATCAGCAGTAA--AATT----A------------AAGTAT-T-------T------T-----T-----------------T---T-T----A----C
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             22723 71 -     33872 AAATTCATCACAGCAAGTTGAGATTT-AA-ATTTGCAAACT-T---------------------ATCAGCAGTAA--AATT----A------------AAGTAT-T-------T------T-----T-----------------T---T-T----A----C
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1523037 74 -   2331223 aaatttgtCGCAGTAAGTTAAGATTT-AA-ATTTGCAAACT-T---------------------ATCAGCAATGa--agtt----a-----------aa------g---taa-ttttt--t-----t-----------------t---t-t----a----c
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                135489 83 -    281493 AAATTCATCACAGGAAGTTGAGATTT-AA-ATTCGCAAACT-T---------------------GTCAGCAATGA--AATT----A-------A----A------GTGA----T------TT----T-----TTTTTTTTTTGTT---T-T----A----C
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       124964 72 -    134049 AAATTCATCACAGTCCACTGAGATTT-AA-ATTCACAAACT-T---------------------ATCAGCAGTGA--AATT----A-------A----A------GT-A--A-T------TT-T--T-----------------T---T-T----A----C
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        212018 84 -    227762 AAATTCATCACAGGAAGTTGAGATTT-AA-ATTCGGAAACT-T---------------------GTCAGCAATGA--AATT----A-------A----A------GTGA----T------TT----T----TGTTTTGTTTTGTT---T-T----A----C
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     13201 56 -     20485 GAATTCATCACAGTAAGCTGAGACTT-AC-TTTCACAAAAA-G---------------------ATCAGCAGGAA--AGTT----A---------------------------------------------------------------------------
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 I 12
s Ziphius_cavirostris.ZipCav_flattened_line_127025           5301 72 -      8775 AAATTCATCACAGTAAGTTGAGATCT-AA-ATTCTCAAACT-T---------------------ATCAGCAATGA--AATT----A-------A----A------GTGAT---T------T-----T-----------------T---T-A---AA----T
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Echinops_telfairi.AAIY02274224.1                            507 14 +      1655 I
e Macaca_tonkeana.k141_2870633                               2864 158 -     27140 T
e Macaca_nigra.k141_282495                                   2859 158 -     46448 T
e Macaca_maura.k141_251854                                  43912 158 -     79256 T

a score=0.000000
s hg38.chr4_GL000008v2_random                                9734 11 +    209709 AAGTT-----TT------------------TTGA
s Acinonyx_jubatus.LLWD01000356.1                         2031810 11 +   3721120 aAGTT-----TC------------------TTGA
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    110486 11 -    189883 AAGTT-----TA------------------TTAA
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 100 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10655145 11 +  23371972 aagtt-----TC------------------TTGA
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7091867 11 -  16596857 aagtt-----TC------------------TTGA
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   10813 11 -     22067 AAATT-----TC------------------TTGA
i Allactaga_bullata.AllBul_scaffold_70162               I 7 C 0
s Allenopithecus_nigroviridis.k141_3103707                  60751 11 +     61638 AAGTT-----TT------------------TTGA
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        52559 11 +     53391 AAGTT-----TT------------------TTGA
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         3284 11 +     72529 AAGTT-----TT------------------TTGA
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          2859 11 +      3797 AAGTT-----TT------------------TTGA
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             8032 11 -     18050 AAGTT-----TT------------------TTGA
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  9145 11 -     11521 AAGTT-----TT------------------TTGA
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              8709 11 -     21359 AAGTT-----TT------------------TTGA
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_298055                                    0 11 +      1823 AAGTT-----TT------------------TTGA
i Alouatta_juara.k141_298055                            n 209 C 0
s Alouatta_macconnelli.k141_1331706                          8000 11 -     10438 AAGTT-----TT------------------TTGA
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            4656 11 +      7047 AAGTT-----TT------------------TTGA
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             7942 11 +     10410 AAGTT-----TT------------------TTGA
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            1745 11 -      4927 AAGTT-----TT------------------TTGA
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             4675 11 +      6429 AAGTT-----TT------------------TTGA
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3518579 11 +   4113121 AAGTT-----TA------------------TTGA
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      388748 11 -    631301 AATTT-----TC------------------TTGA
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            29178 11 +     33004 AAGTT-----TA------------------TTGA
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 60395 11 +     78111 ACGTT-----TT------------------TTGA
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            3334 11 +     22701 ATGTT-----TT------------------TTGA
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5747291 11 +   9889416 ACGTT-----TT------------------TTGA
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             3876 11 -    104377 ATGTT-----TT------------------TTGA
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               3882 11 +     23246 ATGTT-----TT------------------TTGA
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     1896 11 +      5067 AAGTT-----TC------------------CTGA
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      15836 11 +     17483 AAGTT-----TC------------------CTGA
i Arctocebus_calabarensis.k141_1161114                  I 12 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 7144 11 -     29036 AATTT-----TC------------------TTGA
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9537132  5 +  39197703 -----------T------------------TTGA
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             58416  5 +     85812 -----------T------------------TTGA
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 9415  5 +     89302 -----------T------------------TTGA
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             13920  5 -     58268 -----------T------------------TTGA
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             61911  5 +    119057 -----------T------------------TTGA
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               3862 23 -     25888 -----------TAATTTTATTATAAGTTTTTTGA
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 4626 11 -     16375 AAGTT-----TC------------------TTGA
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                               946 11 +      2719 AAGTT-----TC------------------TTGA
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26378593 11 +  51448160 aaGTT-----TC------------------TTGA
i Balaenoptera_acutorostrata.KI537095.1                 I 3 C 0
s Balaenoptera_bonaerensis.DF502048.1                        3825 11 -     13118 aagtt-----tc------------------ttGA
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   41674 11 -     72089 AAGTT-----TA------------------TTGA
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6557685 11 +   6870073 AAGTT-----TA------------------TTGA
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138137924 11 - 161108492 AAGTT-----TA------------------TTGA
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     570298 11 -    998990 AAGTT-----TA------------------TTGA
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136293657 11 - 158972876 AAGTT-----TA------------------TTGA
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1229413 11 -   1914593 AAGTT-----TA------------------TTGA
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               111768 10 -    171031 -AGTT-----TT------------------TTGA
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 10794 10 +    125063 -AGTT-----TT------------------TTGA
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                12842 10 -    216513 -AGTT-----TT------------------TTGA
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        5382 10 -    134917 -AGTT-----TT------------------TTGA
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3218002 11 -   8989139 aagtt-----tc------------------ttAA
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           395707 11 -  15254737 aagtt-----tc------------------ttAA
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2971440 11 +   6889770 aagtt-----tc------------------tTAA
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11516525 11 +  39901454 AAGTT-----TC------------------TTGA
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   11543 11 +     87036 AAGTT-----TC------------------TTGA
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11263186 11 -  35597290 aagtt-----TC------------------TTGA
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11085715 11 +  39895921 aagtt-----TC------------------TTGA
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16452739 11 -  44759192 aagtt-----TC------------------TTGA
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21323683 11 + 157394656 AAGTT-----TA------------------TTGA
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135704910 11 - 157403528 AAGTA-----TA------------------TTGA
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_979108                    10 11 -      1248 AAGTT-----TC------------------TTGA
i Capromys_pilorides.CapPil_scaffold_979108             n 224 C 0
s Carlito_syrichta.NW_007248099.1                          306992 11 +    345090 agttc-----tc------------------TTGA
i Carlito_syrichta.NW_007248099.1                       I 8 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               57942 11 +     67245 AATTT-----TC------------------TTGA
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   28430 11 +     33760 AAGTT-----TT------------------TTGG
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   157227 11 -    276539 AAGTG-----TC------------------TTGA
i Catagonus_wagneri.CatWag_scaffold_1305                I 28 C 0
s Cavia_aperea.AVPZ01000278.1                            15784605 11 -  24422027 NNNNN-----NN------------------NNNN
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15796537 11 -  24440124 aaGTT-----TC------------------TTGA
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       174728 11 +    436027 AAGTT-----TC------------------TTGA
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18888620 11 -  29618158 AAGTT-----TT------------------TTGA
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 6164 11 -     26817 AAGTT-----TT------------------TTGA
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                10404 11 +     25043 AAGTT-----TT------------------TTGA
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         6028 11 +     21754 AGTTC-----TC------------------TTGA
i Cephalopachus_bancanus.k141_702587                    I 8 C 0
s Ceratotherium_simum.JH767818.1                          4361737 11 +   7569818 aagtt-----tc------------------tTGA
i Ceratotherium_simum.JH767818.1                        C 0 I 573
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         1489 11 -      9338 AAGTT-----TC------------------TTGA
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 I 573
s Cercocebus_atys.KQ010443.1                              6552543 11 +   6739814 AAGTT-----TT------------------TTGA
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      54020 11 -     54931 AAGTT-----TT------------------TTGA
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         19004 11 -     19697 AAGTT-----TT------------------TTGA
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         56535 11 -    107033 AAGTT-----TT------------------TTGA
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        2977 11 -      3853 AAGTT-----TT------------------TTGA
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          26913 11 +     30494 AAGTT-----TT------------------TTGA
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           2937 11 -      4022 AAGTT-----TT------------------TTGA
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          2829 11 -      3505 AAGTT-----TT------------------TCGA
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           21619 11 +     35983 AAGTT-----TT------------------TCGA
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11988156 11 +  12117833 AAGTT-----TT------------------TTGA
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46474909 11 +  46592721 AAGTT-----TT------------------TCGA
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      32736 11 +     33420 AAGTT-----TT------------------TCGA
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        2772 11 -      3443 AAGTT-----TT------------------TTGA
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      3763 11 -      4669 AAGTT-----TT------------------TTGA
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        3558 11 -      4411 AAGTT-----TT------------------TCGA
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         3088 11 -      4205 AAGTT-----TT------------------TTGA
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_1070855          1299 11 -      1715 AAGTT-----TC------------------TTGA
i Chaetophractus_vellerosus.ChaVel_scaffold_1070855     I 4 C 0
s Cheirogaleus_major.k141_1157592                           56931 11 -     68416 AAGTT-----TC------------------TTGA
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            5973 11 +     13308 AAGTT-----TC------------------TTGA
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             3437 11 -     18223 AAGTT-----TT------------------TTGA
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             20460 11 +     25473 AAGTT-----TT------------------TTGA
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           39499 11 +     57117 AAGGT-----TT------------------TTGA
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          44174 11 +     54541 AAGTT-----TT------------------TTGA
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15959769 11 +  43084221 AAGTT-----TC------------------TTCA
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         68990 10 +    196370 -AGTT-----TT------------------TTGA
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          13170 10 +     40510 -AGTT-----TT------------------TTGA
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15136370 11 -  15256731 AAGTT-----TT------------------TTGA
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      31416 11 -     53260 AAGTT-----TT------------------TTGA
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101141865 11 + 101219884 AAGTT-----TT------------------TTGA
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                14895 11 -     21363 AAGTT-----TC------------------TTGA
i Choloepus_didactylus.ChoDid_scaffold_36182            I 4 C 0
s Choloepus_hoffmanni.KN194586.1                           760206 11 +    964067 AAGTT-----TC------------------TTGA
i Choloepus_hoffmanni.KN194586.1                        I 4 C 0
s Colobus_angolensis.KN985967.1                          10880444 11 +  10971483 AAGTT-----TT------------------TTGA
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147661602 11 + 156195979 AAGTT-----TT------------------TTGA
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            13589 11 +     23629 AAGTT-----TT------------------TTGA
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60611200  5 +  78930452 CA--T-----AT----------------------
i Condylura_cristata.JH655880.1                         I 1 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         37661 11 -     40477 AAGTT-----TC------------------TCGA
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 275479 11 -    399297 AAGTT-----TA------------------TTAA
i Cricetomys_gambianus.CriGam_scaffold_949              I 5 C 0
s Cricetulus_griseus.LT883672.1                          53027012 11 +  72327488 AAGTT-----TA------------------TTAG
i Cricetulus_griseus.LT883672.1                         I 5 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             18130 11 -     19186 AAGTT-----TC------------------TTAA
i Crocidura_indochinensis.CroInd_scaffold_38409         I 24 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            49823 11 -     70449 AAGTT-----TC------------------TTGA
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  206175 11 -    956709 AAGTT-----TC------------------TTAA
i Ctenodactylus_gundi.CteGun_scaffold_447               I 5 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 28548 11 -     67205 AAGGT-----TT------------------TTGA
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                15376 11 +     26546 AAGTT-----TC------------------TTGA
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             56859 11 -    236241 AAGTT-----TC------------------TAGA
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          180105 11 -   6883506 aagtt-----tc------------------ttGA
i Dasypus_novemcinctus.JH568778.1                       I 4 C 0
s Daubentonia_madagascariensis.ctg11                     16842786 11 +  31942871 AAGTT-----TC------------------TTGA
i Daubentonia_madagascariensis.ctg11                    I 9 C 0
s Delphinapterus_leucas.KZ290064.1                       80035279 11 -  96802777 aaGTT-----TC------------------TTGA
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18697252 11 -  18957592 CATTT-----TC------------------TTGA
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 320385 11 +    993696 aagtt-----tc------------------TTGA
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 I 573
s Diceros_bicornis.DicBicMic_scaffold_9545                   1036 11 +    151128 AAGTT-----TC------------------TTGA
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 I 573
s Dinomys_branickii.DinBra_scaffold_1996                   155652 11 +    228994 AAGTT-----TC------------------TTGA
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3653385 11 +   4240102 ACGTT-----TC------------------CTGA
i Dipodomys_ordii.KN672545.1                            I 6 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 24937 11 +     28912 AAGTT-----TC------------------CGGA
i Dipodomys_stephensi.DipSte_scaffold_44365             I 6 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                34120 11 -     73477 AAGTT-----TC------------------TTGA
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Eidolon_helvum.KE772537.1                                 10627 11 +     24177 aagtt-----tc------------------ttGA
i Eidolon_helvum.KE772537.1                             I 13 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1489941 11 +   1727528 AAGTT-----TA------------------TTGA
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7804693 11 +  15467074 AAGTT-----CC------------------TTGC
i Elephantulus_edwardii.JH947210.1                      I 2 C 0
s Ellobius_lutescens.LOEQ01003611.1                        237670 11 -    369425 AAGTT-----TA------------------TTGA
i Ellobius_lutescens.LOEQ01003611.1                     I 5 C 0
s Ellobius_talpinus.LOJH01090055.1                           4683 11 -      7838 AAGTT-----TA------------------TTGA
i Ellobius_talpinus.LOJH01090055.1                      I 5 C 0
s Enhydra_lutris.KZ291749.1                              85869599 11 +  99434291 aagtt-----TC------------------TTGA
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4702212 11 +   6522550 AAGTC-----TT------------------TTGA
i Eptesicus_fuscus.JH977687.1                           I 10 C 0
s Equus_asinus.JREZ01000062.1                             5851117 11 -   7175178 aagtt-----tC------------------TTGA
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13349620 11 +  41866177 aagtt-----tc------------------TTGA
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          11110 11 +     92910 aagtt-----tc------------------TTGA
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11530904 16 +  16010500 aaattttgtgtc------------------tTAA
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48768548 11 -  48907691 AAGTT-----TT------------------TTGA
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          313480 11 +    330699 AAGTT-----TC------------------TTGA
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             59911 11 +     89355 AAGTT-----TC------------------TTGA
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              2977 11 +     13586 AAGTT-----TC------------------TTGA
i Eulemur_albifrons.k141_715837                         I 4 C 0
s Eulemur_collaris.k141_311830                               2912 11 -      6809 AAGTT-----TC------------------TTGA
i Eulemur_collaris.k141_311830                          I 4 C 0
s Eulemur_coronatus.k141_3240342                             9388 11 +     36558 AAGTT-----TC------------------TTGA
i Eulemur_coronatus.k141_3240342                        I 4 C 0
s Eulemur_flavifrons.k141_903901                             5702 11 +     60246 AAGTT-----TC------------------TTGA
i Eulemur_flavifrons.k141_903901                        I 4 C 0
s Eulemur_fulvus.k141_653297                                 9185 11 +    109717 AAGTT-----TC------------------TTGA
i Eulemur_fulvus.k141_653297                            I 4 C 0
s Eulemur_macaco.k141_1341545                               13564 11 +     16540 AAGTT-----TC------------------TTGA
i Eulemur_macaco.k141_1341545                           I 4 C 0
s Eulemur_mongoz.k141_825972                                13840 11 +     27497 AAGTT-----TC------------------TTGA
i Eulemur_mongoz.k141_825972                            I 4 C 0
s Eulemur_rubriventer.k141_411740                           16306 11 +     26808 AAGTT-----TC------------------TTGA
i Eulemur_rubriventer.k141_411740                       I 4 C 0
s Eulemur_rufus.k141_1620292                                31030 11 +     46535 AAGTT-----TC------------------TTGA
i Eulemur_rufus.k141_1620292                            I 4 C 0
s Eulemur_sanfordi.k141_186399                              13753 11 -     29447 AAGTT-----TC------------------TTGA
i Eulemur_sanfordi.k141_186399                          I 4 C 0
s Felis_catus.CM001386.2                                129890786 11 - 159252932 aAGTT-----TC------------------TTGA
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129277857 11 - 158578461 aAGTT-----TC------------------TTGA
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 18996 11 +     52776 AAGTT-----TC------------------TTGA
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13890716 11 -  19261668 aAGTC-----TC------------------TTGA
i Fukomys_damarensis.KN123630.1                         I 5 C 0
s Galago_moholi.ctg555                                     208891 11 -    847004 AAGTT-----TC------------------TTGA
i Galago_moholi.ctg555                                  I 12 C 0
s Galago_senegalensis.k141_964197                           11272 11 -     43889 AAGTT-----TC------------------TTGA
i Galago_senegalensis.k141_964197                       I 12 C 0
s Galagoides_demidoff.k141_1769638                           8336 11 +     27357 AAGTT-----TC------------------TTGA
i Galagoides_demidoff.k141_1769638                      I 12 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               154250 11 +    324696 AAGTT-----TC------------------TTGA
i Galeopterus_variegatus.GalVar_scaffold_354            I 9 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    179456 11 -    189561 AAGTT-----TA------------------CTGA
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 15 C 0
s Glis_glis.GliGli_scaffold_79770                           10657 11 -     18683 AAGTT-----TC------------------TTGA
i Glis_glis.GliGli_scaffold_79770                       I 9 C 0
s Gorilla_beringei.k141_111300                               3132 11 -     14630 AAGTT-----TT------------------TTGA
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119650231 11 - 195582420 aagTT-----TT------------------TTGA
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   75188 11 +    118900 AACTT-----TC------------------CTGA
i Graphiurus_murinus.GraMur_scaffold_4493               I 11 C 0
s Hapalemur_alaotrensis.k141_1198205                         3537 11 +      3980 AAGTT-----TC------------------TTGA
i Hapalemur_alaotrensis.k141_1198205                    I 4 C 0
s Hapalemur_gilberti.k141_97962                             26013 11 +     26611 AAGTT-----TC------------------TTGA
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             3473 11 +     56096 AAGTT-----TC------------------TTGA
i Hapalemur_griseus.k141_1387522                        I 31 C 0
s Hapalemur_meridionalis.k141_186231                        26750 11 -     42470 AAGTT-----TC------------------TTGA
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        43344 11 -     54384 AAGTT-----TC------------------TTGA
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              15032 11 +     53719 AAGTT-----TC------------------TTGA
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                25955 11 -     91191 AAGTT-----TA------------------TTGA
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2549102 11 +  31725842 aAGTT-----TC------------------TTGA
i Heterocephalus_glaber.JH602058.1                      I 5 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               54508 11 +     73687 GAGTT-----TC------------------TGAA
i Heterohyrax_brucei.HetBruBak_scaffold_25354           I 5 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              145520 11 +    277961 AAGTT-----TC------------------TTGA
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      276864 11 -    477199 aagtt-----tc------------------tcAA
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              6022 11 -      9143 AAGTT-----TC------------------TCAA
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg649                                    99813 11 +    115816 AAGTT-----TT------------------TTGA
i Hoolock_leuconedys.ctg649                                I 68 I 69
s Hyaena_hyaena.HyaHya_flattened_line_20729                 14087 11 -     67322 AAGTT-----TC------------------TTGA
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           17021 11 -    119109 AAGTT-----TC------------------TTGA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              2953 11 +      5897 ACGTT-----TT------------------TTGA
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_1485652                              1374 11 -      1697 ACGTT-----TT------------------GTGA
i Hylobates_agilis.k141_1485652                         C 0 C 0
s Hylobates_klossii.k141_466549                              9398 11 +     11537 ACGTT-----TT------------------GTGA
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14622499 11 -  25970782 ACGTT-----TT------------------TTGA
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1133650                            2388 11 -      2775 ACGTT-----TT------------------TTGA
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             31886 11 -     60944 ACGTT-----TT------------------TTGA
i Hylobates_pileatus_a.tarseq_592                         I 894 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     4153 11 +     22540 AGGTT-----TC------------------TAGA
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7124021 11 +  13083262 aaGTT-----TC------------------CTGA
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_1884019                                   1217 11 -      2196 AAGTT-----TC------------------TTGA
i Indri_indri.k141_1884019                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               7267 11 +     17520 ATGTT-----TC------------------TTGA
i Inia_geoffrensis.IniGeo_flattened_line_66725          I 1 C 0
s Jaculus_jaculus.JH725517.1                              8563553 11 +  11848649 AAGTT-----TC------------------TTGA
i Jaculus_jaculus.JH725517.1                            I 7 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               22092 11 +     37189 AAGTT-----TC------------------TTGA
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          47995 11 -    147782 AAGTT-----TT------------------TTGA
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   112006 11 -    115756 AAGTC-----TT------------------TTGA
i Lasiurus_borealis.LasBor_scaffold_5102                I 10 C 0
s Lemur_catta.scaffold_1                                258405033 11 - 285822530 AAGTT-----TC------------------TTGA
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        21903 11 +     39228 AAGTT-----TC------------------TTAA
i Lepilemur_ankaranensis.k141_884009                    I 5 C 0
s Lepilemur_dorsalis.k141_134267                            51278 11 +     63517 AAGTT-----TC------------------TTAA
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        76521 11 +    116806 AAGTT-----TC------------------TTGA
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     29542 11 -     33031 AAGTT-----TC------------------TTAA
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3083811 11 -   3498232 aagtt-----TC------------------TTGA
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    11009 11 +     22452 AAGTT-----TC------------------TTGA
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            134427 11 +   3060487 aagtt-----tc------------------ttGA
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19245631 11 +  19376315 AAGTT-----TT------------------TTGA
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            8636 11 +     84689 AAGTT-----TC------------------CTGA
i Loris_lydekkerianus.k141_550999                       I 5 C 0
s Loris_tardigradus.ctg97                                 3776387 11 +   6799190 AAGTT-----TC------------------CTGA
i Loris_tardigradus.ctg97                               I 5 C 0
s Loxodonta_africana.GL010040.1                          20589292 11 -  62548349 aagtt-----tc------------------tGGA
i Loxodonta_africana.GL010040.1                         I 4 C 0
s Lycaon_pictus.CM007556.1                               11085171 11 +  39895028 aagtt-----TC------------------TTGA
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             17317 11 +     74745 AAGTT-----TT------------------TTGA
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12703823 11 +  12821369 AAGTT-----TT------------------TTGA
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               5919 11 +      6569 AAGTT-----TT------------------TTGA
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           44221 11 +     63263 AAGCT-----TT------------------TTGA
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_925451                                  229 11 +     10231 AAGTT-----TT------------------TTGA
i Macaca_fuscata.k119_925451                            C 0 C 0
s Macaca_leonina.k141_3421209                                2370 11 +      3017 AAGTT-----TT------------------TTGA
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_mulatta.NC_041755.1                            196032900 11 + 196197964 AAGTT-----TT------------------TTGA
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11443006 11 +  11645122 AAGTT-----TT------------------TTGA
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_radiata.k141_1580474                                2760 11 -      3617 AAGTT-----TT------------------TTGA
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 13092 11 -     55006 AAGTT-----TT------------------TTGA
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43838129 11 +  43892939 AAGTT-----TT------------------TTGA
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                5351 11 -      5978 AAGTT-----TT------------------TTGA
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                700045 11 +    802869 AAGTT-----TC------------------TTGA
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43434791 11 -  43563597 AAGTT-----TT------------------TTGA
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4447617 11 -   4543643 AAGTT-----TT------------------TTGA
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            144535 11 +    252755 aagtt-----tc------------------ttaa
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             34607 11 +     58827 aagtt-----tc------------------ttaa
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36871856 11 +  64221397 aagTT-----TC------------------CTGA
i Marmota_marmota.CZRN01000005.1                        I 10 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       62704 11 -    234502 AAGTT-----TC------------------TCAA
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_146202             409 11 -      1999 AAGTT-----TC------------------TTGA
i Mellivora_capensis.MelCap_flattened_line_146202       C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233                9969 11 +     15977 AAATT-----TA------------------TTAA
i Meriones_unguiculatus.MerUng_scaffold_52233           I 5 C 0
s Mesocricetus_auratus.KB708139.1                         1044751 11 -  26018355 AAGTG-----TA------------------TTAA
i Mesocricetus_auratus.KB708139.1                       I 4 C 0
s Mesoplodon_bidens.MesBid_scaffold_183284                   2137 11 +      2166 AAGTT-----TC------------------TTAA
i Mesoplodon_bidens.MesBid_scaffold_183284              C 0 C 0
s Microcebus_murinus.CM007691.1                          16508153 11 +  47401472 aagtt-----tC------------------TTGA
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  29427 11 -     48017 AAGTT-----TT------------------CTGA
i Microgale_talazaci.MicTal_scaffold_34660              I 6 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               21119 11 -     32043 AATTT-----TC------------------TTGA
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22817870 11 -  98408828 AAGTT-----TA------------------TTGA
i Microtus_ochrogaster.CM001673.1                       I 5 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8207880 11 +  10048721 AAGTT-----TC------------------TTGA
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            32552 11 +     45743 AAGTT-----TC------------------TTGA
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        33450 11 +     34273 AAGTT-----TT------------------TTGA
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         9117 11 -    104932 AAGTT-----TC------------------TTGA
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     3558 11 +      8497 AAGTT-----TC------------------TTGA
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 144862 11 +    154973 AAGTT-----TC------------------TTGA
i Monodon_monoceros.MonMon_M_scaffold_5598              I 5 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                159630 11 +    265003 AATTT-----TC------------------TTGG
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 3043 11 -      4346 AAGTT-----TA------------------TTGA
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  142725 11 -    168139 AAGTT-----TC------------------TTGA
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          17520 11 -    100666 AAGTT-----TT------------------TTGA
i Murina_feae.MurFea_scaffold_2254                      I 10 C 0
s Mus_caroli.LT608236.1                                  70764382 11 +  92629107 AAGTT-----TA------------------TTAA
i Mus_caroli.LT608236.1                                 I 5 C 0
s Mus_musculus.chr16                                     75487419 11 +  98207768 AAGTT-----TA------------------TTAA
i Mus_musculus.chr16                                    I 5 C 0
s Mus_pahari.LT608305.1                                  67553591 11 +  89017189 AAGTT-----ta------------------ttaa
i Mus_pahari.LT608305.1                                 I 5 C 0
s Mus_spretus.CM004110.1                                 74328600 11 +  97876770 AAGTC-----TA------------------TTAA
i Mus_spretus.CM004110.1                                I 5 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              9141 11 +     98495 AAGAT-----TC------------------TTGA
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 10 C 0
s Mustela_putorius.JH417978.1                             4421981 11 -  28371801 aagtt-----TC------------------TTGA
i Mustela_putorius.JH417978.1                           I 24 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     88078 10 -    117718 -AGTT-----TC------------------TTGA
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               965841 11 +   8389877 AAGTT-----TT------------------TTGA
i Myotis_brandtii.KE161952.1                            I 10 C 0
s Myotis_davidii.KB114863.1                               5017532 11 +   6462685 AAGTT-----TT------------------TTGA
i Myotis_davidii.KB114863.1                             I 10 C 0
s Myotis_lucifugus.GL429887.1                             3463428 11 -   3747815 AAGTT-----TT------------------TTGA
i Myotis_lucifugus.GL429887.1                           I 10 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         8623 11 +     66751 AAGTT-----TT------------------TTGA
i Myotis_myotis.MyoMyo_scaffold_6123                    I 10 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3518 11 -      8794 AAGTT-----TC------------------TTGA
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        I 2 C 0
s Nannospalax_galili.KL201303.1                            108474 11 +    362372 AATTT-----CA------------------TTGA
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               5830 11 +     48152 AAGTT-----TT------------------TTGA
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4482716 11 -  14209539 aagtt-----TC------------------TTGA
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3949475 11 -   4490290 aaGTT-----TC------------------TTGA
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  47745 11 +     94413 AATGT-----TC------------------TTGA
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1439838                            701 11 +      3718 ACGTT-----TT------------------TTGA
i Nomascus_annamensis.k141_1439838                      C 0 C 0
s Nomascus_concolor.k141_49591                                924 11 +      2014 ACGTT-----TT------------------TTGA
i Nomascus_concolor.k141_49591                          C 0 C 0
s Nomascus_gabriellae.k141_906566                            2252 11 -      2544 ACGTT-----TT------------------TTGA
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             22728 11 -  18771707 ACGTT-----TT------------------TTGA
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                   477 11 +      4512 ACGTT-----TT------------------TTGA
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                28164 11 +   3668941 aagtt-----TC------------------TTGA
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65564982 11 -  95554990 AAGTT-----TC------------------CTGA
i Nycticebus_bengalensis.LG16                           I 5 C 0
s Nycticebus_coucang.k141_2051882                            1827 11 +      6470 AAGTT-----TC------------------CTGA
i Nycticebus_coucang.k141_2051882                       I 5 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65667352 11 +  89412551 AAGTT-----TC------------------CTGA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     I 5 C 0
s Ochotona_princeps.JH802095.1                            4993971 11 -  23139505 AAGTT-----TC------------------TTAA
i Ochotona_princeps.JH802095.1                          I 11 C 0
s Octodon_degus.JH651621.1                                3683570 11 +  10294119 aaatt-----tc------------------ttga
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             677372 11 -   3126709 aagtt-----CC------------------TTGA
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1078171 11 +   1425656 AAGTT-----TA------------------TTGA
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         35326 11 +     78940 AAGTT-----TA------------------CTGA
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  123144 11 +    145789 AAGTT-----TA------------------TTGA
i Ondatra_zibethicus.OndZib_scaffold_6821               I 5 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  34899 11 +     62360 AAGTT-----TA------------------TTAA
i Onychomys_torridus.OnyTor_scaffold_12578              I 5 C 0
s Orcinus_orca.KB316965.1                                 7223159 11 -   7562323 aaGTT-----TC------------------TTGA
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              41545 11 -     66828 AAGTC-----TC------------------CTGA
i Orycteropus_afer.OryAfe_flattened_line_13509          I 4 C 0
s Oryctolagus_cuniculus.CM000803.1                      141873667 11 + 163896628 AAGTT-----TC------------------TTGA
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      305503 11 -    505867 aagtT-----TC------------------TTGA
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       36979 11 +     38679 AAGTT-----TC------------------TTGA
i Otolemur_crassicaudatus.k141_321880                   I 12 C 0
s Otolemur_garnettii.GL873528.1                          18006421 11 -  38779656 aagTT-----TC------------------TTGA
i Otolemur_garnettii.GL873528.1                         I 12 C 0
s Ovis_aries.CM001582.2                                 134075748 11 - 275406953 AAGTT-----TA------------------TTGA
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      76962 11 +    140051 AAGTT-----TA------------------TTGA
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127572476 11 - 205426864 AAGTT-----TT------------------TTGA
i Pan_paniscus.CM003386.1                               I 6 C 0
s Pan_troglodytes.CM009241.2                            120149629 11 - 196562556 AAGTT-----TT------------------TTGA
i Pan_troglodytes.CM009241.2                            I 67 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  32188 11 +    295523 AAGTT-----TC------------------TTGA
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3635922 11 +  18214204 aagtt-----tc------------------ttGA
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5025569 11 -   6340057 aagtt-----tc------------------ttGA
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1064609 11 -   1292953 AAGTT-----TA------------------TTGA
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188153575 11 - 188283584 AAGTT-----TT------------------TTGA
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            49787 11 +     76494 AAGTT-----TT------------------TTGA
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47510972 11 +  47705337 AAGTT-----TT------------------TTGA
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 64949 11 -    104429 AAGTT-----TT------------------TTGA
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  14740 11 -     29451 AAGTT-----TT------------------TTGA
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                35143 11 +     35859 AAGTT-----TT------------------TTGA
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113487 11 -    135482 AAGTT-----TC------------------TTCA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           3029 11 -     23713 AAGTT-----TC------------------CTGA
i Perodicticus_ibeanus.k141_117958                      I 12 C 0
s Perodicticus_potto.k141_713187                            22328 11 -     27972 AAGTT-----TC------------------CTGA
i Perodicticus_potto.k141_713187                        I 12 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      40942 10 -     45160 AAGTT-----TC------------------CTG-
i Perognathus_longimembris.PerPac_flattened_line_22291  I 8 C 0
s Peromyscus_maniculatus.KI615518.1                       4948075 11 -   8017169 AAATT-----TA------------------TTAA
i Peromyscus_maniculatus.KI615518.1                     I 5 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    10259 11 -     36578 AAGTT-----TC------------------TTGA
i Petromus_typicus.PetTyp_scaffold_33007                I 7 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            119776 11 -    122454 AAGTT-----TC------------------TTGA
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           2833 11 -      3310 AAGTT-----TT------------------TTGA
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       22738 11 -     82327 AAGTT-----TT------------------TTGA
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           19485 11 +     19957 AAGTT-----TT------------------TTGA
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26737499 11 +  26888534 AAGTT-----TT------------------TTGA
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            95291 11 +    112873 AAGTC-----TT------------------TTGA
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        I 10 C 0
s Pithecia_albicans.k141_991845                             41477 10 -     61926 -AGTT-----TT------------------TTGA
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        22906 10 +     78826 -AGTT-----TT------------------TTGA
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              6857 10 -     15800 -AGTT-----TT------------------TTGA
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        10055 10 -     16101 -AGTT-----TT------------------TTGA
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          3364 10 +      9673 -AGTT-----TT------------------TTGA
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13472358 10 -  19735023 -AGTT-----TT------------------TTGA
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           11266 10 -     31692 -AGTT-----TT------------------TTGA
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           3842 11 +     21690 AAGTT-----TC------------------TTGA
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       20702 11 +     44506 AAGTT-----TT------------------TTGA
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        20912 11 +     67491 AAGTT-----TT------------------TTGA
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      11153 11 -     98129 AAGTT-----TT------------------TTGA
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     20758 11 +    147771 AAGTT-----TT------------------TTGA
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        21008 11 -     23762 AAGTT-----TT------------------TTGA
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          1474 11 -     55515 AAGTT-----TT------------------TTGA
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         20827 11 +    152463 AAGTT-----TT------------------TTGA
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      7587 11 +      8943 AAGTT-----TT------------------TTGA
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                         10547 11 +    134592 AAGTT-----TT------------------TTGA
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          21137 11 -     75465 AAGTT-----TT------------------TTGA
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              185024 11 -    373494 AAGTT-----TT------------------TTGA
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19804932 11 +  19899266 AAGTT-----TT------------------TTGA
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               3068 11 -     15069 AAGTT-----TT------------------TTGA
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              3202 11 +     14865 AAGTT-----TT------------------TTGA
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                74372 11 +     78963 GAGTT-----CC------------------TGAA
i Procavia_capensis.ProCapCap_scaffold_15315            I 5 C 0
s Prolemur_simus.MPIZ01000048.1                           6846409 11 +  12164890 aagTT-----TC------------------TTGA
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    665026 11 -   2312742 NNNNN-----NN------------------NNNN
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         1552 11 +     11805 AAGTT-----TC------------------TTGA
i Propithecus_coronatus.k141_1353159                    I 7 C 0
s Propithecus_diadema.k141_577245                           40887 11 +     52369 AAGTT-----TC------------------TTGA
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         33276 11 -     44753 AAGTT-----TC------------------TTGA
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            15197 11 +     27322 AAGTT-----TC------------------TTGA
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       14836 11 -     53241 AAGTT-----TC------------------TTGA
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         37107 11 -     48185 AAGTT-----TC------------------TTGA
i Propithecus_verreauxi.k141_158021                     I 2 C 0
s Psammomys_obesus.NESX01026517.1                           31508 11 +     77221 AAATT-----TA------------------TTAA
i Psammomys_obesus.NESX01026517.1                       I 5 C 0
s Pteronotus_parnellii.KE867983.1                            2299 11 -     27784 aattt-----tc------------------ttGA
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        244076 11 -    344369 AAGTT-----TC------------------TTGA
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13244428 11 -  17261082 aagtt-----tc------------------ttGA
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             602378 11 -   3946241 aagtt-----tc------------------ttGA
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131532150 11 - 161321710 aAGTT-----TC------------------TTGA
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             27197 11 +     56732 AAGTT-----TT------------------TTGA
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6803688 11 +   6970761 AAGTT-----TT------------------TTGA
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             3081 11 +     18040 AAGTT-----TT------------------TTGA
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                14249 11 +     68503 AAGTT-----TA------------------TTGA
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13913475 11 +  90463843 AAGTT-----TA------------------TTAA
i Rattus_norvegicus.chr11                               I 5 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1786242 11 +   2252614 AAGTT-----TC------------------TCAA
i Rhinolophus_sinicus.LVEH01000179.1                    I 3 C 0
s Rhinopithecus_bieti.k119_102124                           13634 11 -     14454 AAGTT-----TT------------------TTGA
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206374960 11 - 206558726 AAGTT-----TT------------------TTGA
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44853860 11 -  45163003 AAGTT-----TT------------------TTGA
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                17718 11 +    109198 AAGTT-----TC------------------TTGA
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            I 32 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       6054 11 +     12214 ATGTT-----TA------------------TTGA
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15670597 11 -  43202129 AAGAT-----TT------------------TTGA
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        2463 11 +     34089 AAGAT-----TT------------------TTGA
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              2404 11 -     60842 AAGAT-----TT------------------TTGA
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              2499 11 +     67014 AAGAT-----TT------------------TTGA
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              2477 11 +     60816 AAGAT-----TT------------------TTGA
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 2414 11 -     76454 AAGAT-----TT------------------TTGA
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17339148 11 -  30362882 AAGTT-----TT------------------TTGA
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         18523 11 -     62485 AAGTT-----TT------------------TTGA
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   29808  7 -    114521 CAGAT-----AT----------------------
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1527475                       25622 11 +     26421 AAGTT-----TT------------------TTGA
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       6082 11 +     20762 AAGTT-----TT------------------TTGA
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         39817 11 +     40653 AAGTT-----TT------------------TTGA
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                           10374 11 -     12194 AAGTT-----TT------------------TTGA
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     23796 11 -     27512 AAGTT-----TT------------------TTGA
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         32815 11 -     33692 AAGTT-----TT------------------TTGA
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            16446 11 +    739146 AAATT-----CC------------------TTAA
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17748658 11 -  27805282 AAGTT-----TG------------------TTAA
i Sorex_araneus.JH798170.1                              I 12 C 0
s Spermophilus_dauricus.KZ294190.1                        2237937 11 +   2842873 aaGTT-----TC------------------CTGA
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             232833 11 -    276980 AAGTT-----TC------------------TTGA
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            25392 11 +     62062 AAGTT-----TC------------------TTGA
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189270302  5 + 218635234 AAGTG-----------------------------
i Sus_scrofa.CM000824.4                                 C 0 I 3
s Symphalangus_syndactylus.tarseq_24                     13900088 11 +  13920577 AAGTT-----TT------------------TTGA
i Symphalangus_syndactylus.tarseq_24                    I 71 C 0
s Tadarida_brasiliensis.TadBra_scaffold_148405               4070 11 -      6063 AAGTT-----TC------------------TTGA
i Tadarida_brasiliensis.TadBra_scaffold_148405          I 228 I 99
s Tamandua_tetradactyla.TamTet_scaffold_26877               13194 11 +     45698 AAGTT-----TC------------------TTGA
i Tamandua_tetradactyla.TamTet_scaffold_26877           I 2 C 0
s Tapirus_indicus.TapInd_scaffold_176                      805168 11 +   1148477 AAGTT-----TC------------------TTGA
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  55828 11 +     99546 AAGTT-----TC------------------TTGA
i Tapirus_terrestris.TapTer_scaffold_14939              I 8 C 0
s Tarsius_lariang.k141_609102                               24475 11 +     42269 AGTTC-----TC------------------TTGA
i Tarsius_lariang.k141_609102                           I 8 C 0
s Tarsius_wallacei.k141_48636                               57791 11 +     65473 AGTTC-----TT------------------TTGA
i Tarsius_wallacei.k141_48636                           I 8 C 0
s Theropithecus_gelada.CM009951.1                       194005111 11 - 194193292 AAGTT-----TT------------------TTGA
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             37314 11 -     47444 AAGTT-----TC------------------TTGA
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         I 5 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  2052  8 +      6782 ---TT-----TT------------------TTGA
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  134308 11 -    259118 AATTT-----TC------------------TTGA
i Tonatia_saurophila.TonSau_scaffold_3334               I 30 C 0
s Trachypithecus_auratus.k141_738098                        24192 11 +     38948 AAGTT-----TT------------------TTGA
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   17919 11 -     32910 AAGTT-----TT------------------TTGA
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       23817 11 +     24652 AAGTT-----TT------------------TTGA
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      2695 11 -      3559 AAGTT-----TT------------------TTGA
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           40640 11 -     54611 AAGTT-----TT------------------TTGA
i Trachypithecus_geei.k141_670367                       I 3 C 0
s Trachypithecus_germaini.k141_809503                       16640 11 +     17312 AAGTT-----TT------------------TTGA
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    24003 11 -     25040 AAGTT-----TT------------------TTGA
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          2664 11 +      3528 AAGTT-----TT------------------TTGA
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  49031 11 +     51589 AAGTT-----TT------------------TTGA
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       12207 11 +     14732 AAGTT-----TT------------------TTGA
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       2684 11 -     28054 AAGTT-----TT------------------TTGA
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44657479 11 -  44834318 AAGTT-----TT------------------TTGA
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        2489 11 +      3372 AAGTT-----TT------------------TTGA
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   3654 11 +     90398 AAGTT-----TC------------------TTGA
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16079757 11 +  31416278 aagtt-----tc------------------tGGA
i Trichechus_manatus.JH594618.1                         I 4 C 0
s Tupaia_chinensis.KB320831.1                             2790147 11 -   3938065 aagTT-----TC------------------TTGA
i Tupaia_chinensis.KB320831.1                           I 6 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    2667 11 +     13056 AAGTT-----TC------------------TTGA
i Tupaia_tana.TupTan_flattened_line_68454               I 6 C 0
s Tursiops_truncatus.MRVK01000923.1                      69311876 11 -  96451834 atgtt-----tc------------------ttga
i Tursiops_truncatus.MRVK01000923.1                     I 1 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 25004  7 -     25548 CAGAT-----AC----------------------
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6512631 11 +  28682327 aagtt-----TC------------------TTGA
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  3250 11 -     20643 AAGTT-----TC------------------TTAA
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             22794 11 -     33872 AAGTT-----TC------------------TTAA
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1523111 11 -   2331223 aagtt-----tc------------------tTAA
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                135572 11 -    281493 AAGTT-----TC------------------TTGA
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       125036 11 -    134049 AAGTT-----TC------------------CAGA
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        212102 11 -    227762 AAGTT-----TC------------------TTGA
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     13269 11 -     20485 AAGTT-----TA------------------TTGA
i Zapus_hudsonius.ZapHud_scaffold_64392                 I 12 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           5373 11 -      8775 AAGTG-----TC------------------TTAA
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_141308              6996  7 -     12508 I
e Echinops_telfairi.AAIY02274224.1                            507 14 +      1655 I
e Sigmodon_hispidus.SigHis_scaffold_11332                   97692  5 -    120886 I
e Macaca_tonkeana.k141_2870633                               2864 158 -     27140 T
e Macaca_nigra.k141_282495                                   2859 158 -     46448 T
e Macaca_maura.k141_251854                                  43912 158 -     79256 T

a score=0.000000
s hg38.chr4_GL000008v2_random                                9745  6 +    209709 CAC---------------CAG
s Acinonyx_jubatus.LLWD01000356.1                         2031821  6 +   3721120 CTT---------------TGT
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    110497  6 -    189883 CAC---------------AAG
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10655156  6 +  23371972 CTC---------------CAG
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7091878  6 -  16596857 CTC---------------CAG
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   10824  5 -     22067 TAC----------------AG
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_3103707                  60762  6 +     61638 CAC---------------CAG
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        52570  6 +     53391 CAC---------------CAG
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         3295  6 +     72529 CAC---------------CAG
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          2870  6 +      3797 CAC---------------CAG
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             8043  6 -     18050 TAG---------------CAG
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  9156  6 -     11521 TAG---------------CAG
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              8720  6 -     21359 TAG---------------CAG
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_298055                                   11  6 +      1823 TAG---------------CAG
i Alouatta_juara.k141_298055                            C 0 C 0
s Alouatta_macconnelli.k141_1331706                          8011  6 -     10438 TAG---------------CAG
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            4667  6 +      7047 TAG---------------CAG
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             7953  6 +     10410 TAG---------------CAG
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            1756  6 -      4927 TAG---------------CAG
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             4686  6 +      6429 TAG---------------CAG
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3518590  6 +   4113121 CTC---------------CAG
i Ammotragus_lervia.NIVO01013474.1                      C 0 I 33
s Anoura_caudifer.AnoCau_scaffold_422                      388759  6 -    631301 CTG---------------CAG
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            29189  6 +     33004 CCC---------------CAG
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 60406  6 +     78111 TAG---------------CAG
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            3345  6 +     22701 TAG---------------CAG
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5747302  6 +   9889416 TAG---------------CAG
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             3887  6 -    104377 TAG---------------CAG
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               3893  6 +     23246 TAG---------------CAG
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     1907  6 +      5067 CAC---------------CAT
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      15847  6 +     17483 TAC---------------CAG
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 7155  6 -     29036 CTC---------------CAG
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9537137  6 +  39197703 TAG---------------CAG
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             58421  6 +     85812 TAG---------------CAG
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 9420  6 +     89302 TAG---------------CAG
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             13925  6 -     58268 TAG---------------CAG
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             61916  6 +    119057 TAG---------------CAG
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               3885  6 -     25888 TAG---------------CAG
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 4637  6 -     16375 CAT---------------AAG
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                               957  6 +      2719 CAC---------------AAG
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26378604  6 +  51448160 CTC---------------CAG
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        3836  6 -     13118 CTC---------------CTG
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   41685  6 -     72089 CTC---------------CAG
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6557696  6 +   6870073 CTC---------------CAG
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138137935  6 - 161108492 CTC---------------CAG
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     570309  6 -    998990 CTC---------------CAG
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136293668  6 - 158972876 CTC---------------CAG
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1229424  6 -   1914593 CTC---------------CAG
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               111778  6 -    171031 TAG---------------CAG
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 10804  6 +    125063 TAG---------------CAG
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                12852  6 -    216513 TAG---------------CAG
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        5392  6 -    134917 TAG---------------CAG
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3218013  6 -   8989139 CTC---------------CAG
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           395718  6 -  15254737 CTC---------------CAG
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2971451  6 +   6889770 CTC---------------CAG
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11516536  6 +  39901454 CTC---------------CAG
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   11554  6 +     87036 CTC---------------CAG
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11263197  6 -  35597290 CTC---------------CAG
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11085726  6 +  39895921 CTC---------------CAG
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16452750  6 -  44759192 CTC---------------CAG
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21323694  6 + 157394656 CTC---------------CAG
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135704921  6 - 157403528 CTC---------------CAG
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_979108                    21  6 -      1248 CAC---------------TAG
i Capromys_pilorides.CapPil_scaffold_979108             C 0 C 0
s Carlito_syrichta.NW_007248099.1                          307003  6 +    345090 TAC---------------AAG
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               57953  6 +     67245 CTC---------------CAG
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   28441  6 +     33760 CAC---------------CAG
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   157238  6 -    276539 CTC---------------CAT
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15784616  6 -  24422027 NNN---------------NNN
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15796548  6 -  24440124 CAC---------------TAG
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       174739  6 +    436027 CAC---------------TAG
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18888631  6 -  29618158 TGG---------------CAG
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 6175  6 -     26817 TGG---------------CAG
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                10415  6 +     25043 TGG---------------CAG
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         6039  6 +     21754 TAC---------------AAG
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4362321  6 +   7569818 ctG---------------CAG
i Ceratotherium_simum.JH767818.1                        I 573 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         2073  6 -      9338 CTG---------------CAG
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    I 573 C 0
s Cercocebus_atys.KQ010443.1                              6552554  6 +   6739814 CAC---------------CAG
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      54031  6 -     54931 CAC---------------CAG
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         19015  6 -     19697 CAC---------------CAG
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         56546  6 -    107033 CAC---------------CAG
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        2988  6 -      3853 CAC---------------CAG
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          26924  6 +     30494 CAC---------------CAG
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           2948  6 -      4022 CAC---------------CAG
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          2840  6 -      3505 CAC---------------CAG
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           21630  6 +     35983 CAC---------------CAG
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11988167  6 +  12117833 CAC---------------CAG
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46474920  6 +  46592721 CAC---------------CAG
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      32747  6 +     33420 CAT---------------CAG
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        2783  6 -      3443 CAC---------------CAG
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      3774  6 -      4669 CAC---------------CAG
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        3569  6 -      4411 CAC---------------CAG
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         3099  6 -      4205 CAC---------------CAG
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_1070855          1310  4 -      1715 C-----------------TAG
i Chaetophractus_vellerosus.ChaVel_scaffold_1070855     C 0 C 0
s Cheirogaleus_major.k141_1157592                           56942  6 -     68416 CAC---------------AAG
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            5984  6 +     13308 CAC---------------AAG
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             3448  6 -     18223 TAG---------------CAG
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             20471  6 +     25473 TAG---------------CAG
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           39510  6 +     57117 TAG---------------CAG
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          44185  6 +     54541 TAG---------------CAG
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15959780  6 +  43084221 CAG---------------TAG
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         69000  6 +    196370 TAG---------------CAG
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          13180  6 +     40510 TAG---------------CAG
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15136381  6 -  15256731 CAC---------------CAG
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      31427  6 -     53260 CAC---------------CAG
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101141876  6 + 101219884 CAC---------------CAG
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                14906  6 -     21363 CT-------------C--TAG
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           760217  6 +    964067 CT-------------C--TAG
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_141308              7003  3 -     12508 ------------------TAG
i Chrysochloris_asiatica.ChrAsi_scaffold_141308         I 7 C 0
s Colobus_angolensis.KN985967.1                          10880455  6 +  10971483 CAC---------------GAG
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147661613  6 + 156195979 CAC---------------GAG
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            13600  6 +     23629 CAC---------------GAG
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60611205  2 +  78930452 AA-------------------
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         37672  6 -     40477 CTC---------------CAG
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 275490  6 -    399297 CAC---------------AAG
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53027023  6 +  72327488 CAC---------------AAT
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             18141  6 -     19186 CTC---------------AAA
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            49834  6 -     70449 CTT---------------TGG
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  206186  6 -    956709 TGG---------------CAA
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 28559  6 -     67205 CAC---------------TAG
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                15387  6 +     26546 CAC---------------TAG
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             56870  6 -    236241 CAC---------------TAG
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          180116  6 -   6883506 CTC---------------TAG
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16842797  6 +  31942871 CAC---------------CAG
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80035290  6 -  96802777 CTC---------------CAG
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18697263  6 -  18957592 CTC---------------CAG
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 320969  6 +    993696 CTG---------------CAG
i Dicerorhinus_sumatrensis.PEKH010003161.1              I 573 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   1620  6 +    151128 CTG---------------CAG
i Diceros_bicornis.DicBicMic_scaffold_9545              I 573 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   155663  6 +    228994 CAC---------------AAG
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3653396  6 +   4240102 CAC---------------CAG
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 24948  6 +     28912 CAC---------------CAG
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                34131  6 -     73477 CAC---------------TAG
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Eidolon_helvum.KE772537.1                                 10638  6 +     24177 CTC---------------CAG
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1489952  6 +   1727528 CTC---------------CAG
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7804704  4 +  15467074 C-----------------TCT
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        237681  6 -    369425 CAC---------------AAG
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           4694  6 -      7838 CAC---------------AAG
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85869610  6 +  99434291 CTC---------------CAG
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4702223  6 +   6522550 TTC---------------CAG
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5851128  6 -   7175178 CTC---------------CAG
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13349631  6 +  41866177 CTC---------------CAG
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          11121  6 +     92910 CTC---------------CAG
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11530920  6 +  16010500 CTG---------------CAG
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48768559  6 -  48907691 CAC---------------CAG
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          313491  6 +    330699 CTC---------------CAG
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             59922  6 +     89355 CTC---------------CAG
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              2988  6 +     13586 CAC---------------AAG
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               2923  6 -      6809 CAC---------------AAG
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             9399  6 +     36558 CAC---------------AAG
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             5713  6 +     60246 CAC---------------AAG
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 9196  6 +    109717 CAC---------------AAG
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               13575  6 +     16540 CAC---------------AAG
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                13851  6 +     27497 CAC---------------AAG
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           16317  6 +     26808 CAC---------------AAG
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                31041  6 +     46535 CAC---------------AAG
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              13764  6 -     29447 CAC---------------AAG
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129890797  6 - 159252932 CTT---------------TGT
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129277868  6 - 158578461 CTT---------------TGT
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 19007  6 +     52776 CTT---------------TGT
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13890727  6 -  19261668 CAC---------------TAG
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     208902  6 -    847004 TAC---------------CAG
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           11283  6 -     43889 TAC---------------CAG
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           8347  6 +     27357 TAC---------------CCG
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               154261  6 +    324696 CAT---------------CAG
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    179467  6 -    189561 CTC---------------CAG
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           10668  6 -     18683 TAC---------------CAC
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               3143  6 -     14630 CAC---------------CAG
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119650242  6 - 195582420 CAC---------------CAG
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   75199  6 +    118900 CAA---------------CAC
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                         3548  6 +      3980 CAC---------------AAG
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             26024  6 +     26611 CAC---------------AAG
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             3484  6 +     56096 CAC---------------AAG
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        26761  6 -     42470 CAC---------------AAG
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        43355  6 -     54384 CAC---------------AAG
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              15043  6 +     53719 CTT---------------TGG
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                25966  6 -     91191 CTC---------------CAG
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2549113  6 +  31725842 CAC---------------TAG
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               54519  6 +     73687 CTC---------------CAG
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              145531  6 +    277961 CTC---------------CAG
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      276875  6 -    477199 CTC---------------CAG
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              6033  6 -      9143 CTC---------------CAG
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      2405  6 -   7690867 CAC---------------CAG
i Hoolock_leuconedys.ctg79                                 I 10 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 14098  6 -     67322 CTT---------------TGG
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           17032  6 -    119109 CAG---------------TAG
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              2964  6 +      5897 CAC---------------CAG
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_1485652                              1385  6 -      1697 CAC---------------CAG
i Hylobates_agilis.k141_1485652                         C 0 C 0
s Hylobates_klossii.k141_466549                              9409  6 +     11537 CAC---------------CAG
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14622510  6 -  25970782 CAC---------------CAG
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1133650                            2399  6 -      2775 CAC---------------CAG
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             31897  6 -     60944 CAC---------------CAG
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     4164  6 +     22540 AGC---------------CAG
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7124032  6 +  13083262 CAC---------------CAG
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_1884019                                   1228  6 -      2196 CAC---------------AAG
i Indri_indri.k141_1884019                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               7278  6 +     17520 CTC---------------CAG
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8563564  5 +  11848649 TAC----------------AG
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               22103  6 +     37189 CTC---------------CAG
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          48006  6 -    147782 TAG---------------CAG
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   112017  6 -    115756 TTC---------------CAG
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258405044  6 - 285822530 CAC---------------AAG
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        21914  6 +     39228 CAC---------------AAG
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            51289  6 +     63517 CAC---------------AAG
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        76532  6 +    116806 CAC---------------AAG
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     29553  6 -     33031 CAC---------------AAG
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3083822  6 -   3498232 CTC---------------CAG
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    11020  6 +     22452 CAC---------------CAG
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            134438  6 +   3060487 CTC---------------CAG
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19245642  6 +  19376315 CAC---------------CAG
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            8647  6 +     84689 TAT---------------CAG
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3776398  6 +   6799190 TAT---------------CAG
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20589303  6 -  62548349 CTG---------------TAG
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11085182  6 +  39895028 CTC---------------CAG
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             17328  6 +     74745 CAC---------------CAG
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12703834  6 +  12821369 CAC---------------CAG
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               5930  6 +      6569 CAC---------------CAG
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           44232  6 +     63263 CAC---------------CAG
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_925451                                  240  6 +     10231 CAC---------------CAG
i Macaca_fuscata.k119_925451                            C 0 C 0
s Macaca_leonina.k141_3421209                                2381  6 +      3017 CAC---------------CAG
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_mulatta.NC_041755.1                            196032911  6 + 196197964 CAC---------------CAG
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11443017  6 +  11645122 CAC---------------CAG
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_radiata.k141_1580474                                2771  6 -      3617 CAC---------------CAG
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 13103  6 -     55006 CAC---------------CAG
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43838140  6 +  43892939 CAC---------------CAG
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                5362  6 -      5978 CAC---------------CAG
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                700056  6 +    802869 CTC---------------CAG
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43434802  6 -  43563597 CAC---------------CAG
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4447628  6 -   4543643 CAC---------------CAG
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            144546  6 +    252755 ctT---------------CAT
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             34618  6 +     58827 ctT---------------CAT
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36871867  6 +  64221397 CAC---------------CAG
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       62715  6 -    234502 CTC---------------CAG
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_146202             420  6 -      1999 CTC---------------CAG
i Mellivora_capensis.MelCap_flattened_line_146202       C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233                9980  4 +     15977 CAC---------------A--
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1044762  6 -  26018355 CAC---------------ATT
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_183284                   2148  6 +      2166 CTC---------------CAG
i Mesoplodon_bidens.MesBid_scaffold_183284              C 0 C 0
s Microcebus_murinus.CM007691.1                          16508164  6 +  47401472 CAC---------------AAG
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  29438  4 -     48017 C-----------------TAG
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               21130  6 -     32043 CCC---------------TAG
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22817881  6 -  98408828 CAC---------------AAG
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8207891  6 +  10048721 CTC---------------CAG
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            32563  6 +     45743 CTC---------------CAG
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        33461  6 +     34273 CAC---------------CAG
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         9128  6 -    104932 CTC---------------CAG
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     3569  6 +      8497 CAC---------------AAG
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 144873  6 +    154973 CTC---------------CAG
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                159641  6 +    265003 CTC---------------CAG
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 3054  6 -      4346 CTC---------------CAG
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  142736  6 -    168139 CTT---------------TGG
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          17531  6 -    100666 TTC---------------CAG
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70764393  6 +  92629107 CAT---------------AAG
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75487430  6 +  98207768 CAC---------------AAG
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67553602  6 +  89017189 tac---------------aat
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74328611  6 +  97876770 CAC---------------AAG
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              9152  6 +     98495 CAT---------------CAC
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4421992  6 -  28371801 CTC---------------CAG
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     88088  6 -    117718 CAC---------------TGG
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               965852  6 +   8389877 TTC---------------CAG
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5017543  6 +   6462685 TTC---------------CAG
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3463439  6 -   3747815 TTC---------------CAG
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         8634  6 +     66751 TTC---------------CAG
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3529  2 -      8794 CA-------------------
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            108485  6 +    362372 TAT---------------AAG
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               5841  6 +     48152 CAC---------------CAG
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4482727  6 -  14209539 CTC---------------CAG
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3949486  6 -   4490290 CTC---------------CAG
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  47756  6 +     94413 CTC---------------CAG
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1439838                            712  6 +      3718 CAC---------------CAG
i Nomascus_annamensis.k141_1439838                      C 0 C 0
s Nomascus_concolor.k141_49591                                935  6 +      2014 CAC---------------CAG
i Nomascus_concolor.k141_49591                          C 0 C 0
s Nomascus_gabriellae.k141_906566                            2263  6 -      2544 CAC---------------CAG
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             22739  6 -  18771707 CAC---------------CAG
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                   488  6 +      4512 CAC---------------CAG
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                28175  6 +   3668941 CTC---------------CAG
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65564993  6 -  95554990 TAT---------------CAG
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            1838  6 +      6470 TAT---------------CAG
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65667363  6 +  89412551 TAT---------------CAG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4993982  6 -  23139505 CGC---------------CAG
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3683581  6 +  10294119 cAC---------------Tag
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             677383  6 -   3126709 CTC---------------CAG
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1078182  6 +   1425656 CTC---------------CAG
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         35337  6 +     78940 CTC---------------CAG
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  123155  6 +    145789 CAC---------------AAG
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  34910 21 +     62360 CACAAGTAATATAATCACAAG
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7223170  6 -   7562323 CTC---------------CAG
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              41556  4 -     66828 C-----------------TAG
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141873678  6 + 163896628 CAC---------------CAG
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      305514  6 -    505867 CTC---------------CAG
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       36990  6 +     38679 TAC---------------CAG
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18006432  6 -  38779656 TAC---------------CAG
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134075759  6 - 275406953 CTC---------------CAG
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      76973  6 +    140051 CTC---------------CAG
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127572487  6 - 205426864 CAC---------------CAG
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120149640  6 - 196562556 CAC---------------CAG
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  32199  6 +    295523 CTT---------------TGT
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3635933  6 +  18214204 CTT---------------TGT
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5025580  6 -   6340057 CTT---------------TGT
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1064620  6 -   1292953 CTC---------------CAG
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188153586  6 - 188283584 CAC---------------CAG
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            49798  6 +     76494 CAC---------------CAG
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47510983  6 +  47705337 CAC---------------CAG
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 64960  6 -    104429 CAC---------------CAG
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  14751  6 -     29451 CAC---------------CAG
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                35154  6 +     35859 CAC---------------CAG
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113498  6 -    135482 CTT---------------TGG
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           3040  6 -     23713 TAC---------------CAG
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            22339  6 -     27972 TAC---------------CAG
i Perodicticus_potto.k141_713187                        C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4948086  6 -   8017169 CAC---------------AAG
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    10270  2 -     36578 -------------------AG
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            119787  6 -    122454 CTC---------------CAG
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           2844  6 -      3310 CAC---------------CAG
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       22749  6 -     82327 CAC---------------CAG
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           19496  6 +     19957 CAC---------------CAG
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26737510  6 +  26888534 CAC---------------CAG
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            95302  6 +    112873 TTC---------------CAT
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             41487  6 -     61926 TAG---------------CAG
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        22916  6 +     78826 TAG---------------CAG
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              6867  6 -     15800 TAG---------------CAG
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        10065  6 -     16101 TAG---------------CAG
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          3374  6 +      9673 TAG---------------CAG
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13472368  6 -  19735023 TAG---------------CAG
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           11276  6 -     31692 TAG---------------CAG
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           3853  6 +     21690 CTC---------------CAG
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       20713  6 +     44506 TAG---------------CAG
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        20923  6 +     67491 TAG---------------CAG
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      11164  6 -     98129 TAG---------------CAG
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     20769  6 +    147771 TAG---------------CAG
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        21019  6 -     23762 TAG---------------CAG
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          1485  6 -     55515 TAG---------------CAG
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         20838  6 +    152463 TAG---------------CAG
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      7598  6 +      8943 TAG---------------CAG
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                         10558  6 +    134592 TAG---------------CAG
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          21148  6 -     75465 TAG---------------CAG
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              185035  6 -    373494 CAC---------------CAG
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19804943  6 +  19899266 CAC---------------CAG
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               3079  6 -     15069 CAC---------------CAG
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              3213  6 +     14865 CAC---------------CAG
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                74383  6 +     78963 CTC---------------CAG
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6846420  6 +  12164890 CAC---------------AAG
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    665037  6 -   2312742 NNN---------------NNN
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         1563  6 +     11805 CAC---------------AAG
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           40898  6 +     52369 CAC---------------AAG
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         33287  6 -     44753 CAC---------------AAG
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            15208  6 +     27322 CAC---------------AAG
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       14847  6 -     53241 CAC---------------AAG
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         37118  6 -     48185 CAC---------------AAG
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           31519  4 +     77221 CAC---------------A--
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            2310  6 -     27784 CTC---------------TAG
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        244087  6 -    344369 CTC---------------CAG
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13244439  6 -  17261082 CTC---------------CAG
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             602389  6 -   3946241 CTC---------------CAG
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131532161  6 - 161321710 CTT---------------TGT
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             27208  6 +     56732 CAC---------------CAG
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6803699  6 +   6970761 CAC---------------CAG
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             3092  6 +     18040 CAC---------------CAG
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                14260  6 +     68503 CTC---------------CAG
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13913486  6 +  90463843 CAC---------------AAG
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1786253  6 +   2252614 CTC---------------CAG
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           13645  6 -     14454 CAC---------------CAG
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206374971  6 - 206558726 CAC---------------CAG
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44853871  6 -  45163003 CAC---------------CAG
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                17729  6 +    109198 CTC---------------CAG
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       6065  6 +     12214 CTT---------------CAA
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15670608  4 -  43202129 TAG---------------C--
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        2474  4 +     34089 TAG---------------C--
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              2415  4 -     60842 TAG---------------C--
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              2510  4 +     67014 TAG---------------C--
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              2488  4 +     60816 TAG---------------C--
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 2425  4 -     76454 TAG---------------C--
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17339159  6 -  30362882 CAG---------------CAG
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         18534  6 -     62485 CAG---------------CAG
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   29815  6 -    114521 AAC---------------CAG
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1527475                       25633  6 +     26421 CAC---------------CAG
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       6093  6 +     20762 CAC---------------CAG
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         39828  6 +     40653 CAC---------------CAG
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                           10385  6 -     12194 CAC---------------CAG
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     23807  6 -     27512 CAC---------------CAG
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         32826  6 -     33692 CAC---------------CAG
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   97697  3 -    120886 ------------------AAG
i Sigmodon_hispidus.SigHis_scaffold_11332               I 5 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            16457  6 +    739146 CAT---------------GAG
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17748669  6 -  27805282 CTC---------------AAG
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2237948  6 +   2842873 CAC---------------CAG
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             232844  6 -    276980 CTC---------------CAG
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            25403  6 +     62062 CTT---------------TGG
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189270310  6 + 218635234 CTC---------------CAG
i Sus_scrofa.CM000824.4                                 I 3 C 0
s Symphalangus_syndactylus.tarseq_24                     13900099  6 +  13920577 CAC---------------CAG
i Symphalangus_syndactylus.tarseq_24                    C 0 T 245
s Tadarida_brasiliensis.TadBra_scaffold_145589               4257  6 -      6213 CTC---------------CAG
i Tadarida_brasiliensis.TadBra_scaffold_145589          I 11 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               13205  2 +     45698 CA-------------------
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      805179  6 +   1148477 CTC---------------CGG
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  55839  6 +     99546 CTC---------------CGG
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               24486  6 +     42269 TAC---------------AAG
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               57802  6 +     65473 TAC---------------AAG
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194005122  6 - 194193292 CAC---------------CAG
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             37325  6 -     47444 CAT---------------GAG
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  2060  4 +      6782 C-----------------TAG
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  134319  6 -    259118 CTC---------------CAG
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        24203  6 +     38948 CAC---------------CAG
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   17930  6 -     32910 CAC---------------CAG
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       23828  6 +     24652 CAC---------------CAG
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      2706  6 -      3559 CAC---------------CAG
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           40651  6 -     54611 CAC---------------CAG
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       16651  6 +     17312 CAC---------------CAG
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    24014  6 -     25040 CAC---------------CAG
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          2675  6 +      3528 CAC---------------CAG
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  49042  6 +     51589 CAC---------------CAG
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       12218  6 +     14732 CAC---------------CAG
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       2695  6 -     28054 CAC---------------CAG
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44657490  6 -  44834318 CAC---------------CAG
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        2500  6 +      3372 CAC---------------CAG
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   3665  6 +     90398 TTC---------------CAG
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16079768  3 +  31416278 CTC------------------
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2790158  6 -   3938065 CAG---------------CAT
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    2678  6 +     13056 CAG---------------CAT
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69311887  6 -  96451834 cTC---------------CAG
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 25011  6 -     25548 AAC---------------CAG
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6512642  6 +  28682327 TTC---------------CAG
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  3261  6 -     20643 CAC---------------AAG
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             22805  6 -     33872 CAC---------------AAG
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1523122  6 -   2331223 CTC---------------CAG
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                135583  6 -    281493 CTC---------------CAG
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       125047  6 -    134049 CAT---------------CAG
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        212113  6 -    227762 CTC---------------CAG
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     13280  5 -     20485 TGC----------------AG
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           5384  6 -      8775 CTC---------------CAG
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Perognathus_longimembris.PerPac_flattened_line_22291      40952  0 -     45160 C
e Echinops_telfairi.AAIY02274224.1                            507 14 +      1655 I
e Macaca_tonkeana.k141_2870633                               2864 158 -     27140 T
e Macaca_nigra.k141_282495                                   2859 158 -     46448 T
e Macaca_maura.k141_251854                                  43912 158 -     79256 T

a score=0.000000
s hg38.chr4_GL000008v2_random                                9751 16 +    209709 AT-TATGTGG-G-GTA--AAT
s Acinonyx_jubatus.LLWD01000356.1                         2031827 16 +   3721120 AT-TATATG-GG-TTA--GAG
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    110503 16 -    189883 AC-TATATGA-T-CTG--GAG
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10655162 16 +  23371972 AT-TATGTG-GG-CTA--GAG
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7091884 16 -  16596857 AT-TATATG-GG-TTA--GAG
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   10829 16 -     22067 AC-TATATAA-T-CCA--TAG
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_3103707                  60768 16 +     61638 AT-TATATAG-G-GTA--GAG
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        52576 16 +     53391 AT-TATATGG-G-GTA--TAG
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         3301 16 +     72529 AC-TATATGG-G-GTA--TAG
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          2876 16 +      3797 AT-TATATGG-G-GTA--TAG
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             8049 16 -     18050 AT-TATATGG-G-GTA--GAG
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  9162 16 -     11521 AT-TATATGG-G-GTA--GAG
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              8726 16 -     21359 AT-TATATGG-G-GTA--GAG
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_298055                                   17 16 +      1823 AT-TATATGG-G-GTA--GAG
i Alouatta_juara.k141_298055                            C 0 C 0
s Alouatta_macconnelli.k141_1331706                          8017 16 -     10438 AT-TATATGG-G-GTA--GAG
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            4673 16 +      7047 AT-TATATGG-G-GTA--GAG
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             7959 16 +     10410 AT-TATATGG-G-GTA--GAG
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            1762 16 -      4927 AT-TATATGG-G-GTA--GAG
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             4692 16 +      6429 AT-TATATGG-G-GTA--GAG
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3518629 18 +   4113121 ATTTATATG--G-TTAAAGAG
i Ammotragus_lervia.NIVO01013474.1                      I 33 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      388765 15 -    631301 AT-TATATG--A-TTA--GAG
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            29195 18 +     33004 ATTTATACA--G-TTAATGAG
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 60412 16 +     78111 AT-TATATGG-G-GTA--GAG
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            3351 16 +     22701 AT-TATATGG-G-GTA--GAG
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5747308 16 +   9889416 AT-TATATGG-G-GTA--GAG
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             3893 16 -    104377 AT-TATATGG-G-GTA--GAG
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               3899 16 +     23246 AT-TATATGG-G-GTA--GAG
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     1913 16 +      5067 AT-TATATGG-G-CTA--GAG
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      15853 12 +     17483 A-----AAGA-G-ACA--GAG
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 7161 15 -     29036 AT-CATATG--G-TTA--GAG
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9537143 16 +  39197703 AT-TATATGG-G-GTA--GAG
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             58427 16 +     85812 AT-TATATGG-G-GTA--GAG
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 9426 16 +     89302 AT-TATATGG-G-GTA--GAG
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             13931 16 -     58268 AT-TATATGG-G-GTA--GAG
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             61922 16 +    119057 AT-TATATGG-G-GTA--GAG
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               3891 16 -     25888 AT-TATATGG-G-GTA--GAG
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 4643 16 -     16375 AT-TATATGG-G-ATA--GAG
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                               963 16 +      2719 AT-TATATGG-G-ATA--GAG
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26378610 17 +  51448160 AT-TATATG--G-TTAATGAG
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        3842 17 -     13118 AT-TATATG--G-TTAATGAG
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   41691 18 -     72089 ATTTAAATG--G-TTAATGAA
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6557702 18 +   6870073 ATTTATATG--G-TTAATGAG
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138137941 18 - 161108492 ATTTATATG--G-TTAATGAG
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     570315 18 -    998990 ATTTATATG--G-TTAATGAG
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136293674 18 - 158972876 ATTTATATG--G-TTAATGAG
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1229430 18 -   1914593 ATTTATATG--G-TTAATGAG
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               111784 16 -    171031 CT-TATATGG-A-GTA--GAG
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 10810 16 +    125063 CT-TATATGG-A-GTA--GAG
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                12858 16 -    216513 CT-TATATGG-A-GTA--GAG
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        5398 16 -    134917 CT-TATATGG-A-GTA--GAG
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3218019 15 -   8989139 AT-TATATG--g-tta--gaa
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           395724 15 -  15254737 AT-TATATG--g-tta--gaa
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2971457 15 +   6889770 AT-TATATG--g-tta--gaa
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11516542 16 +  39901454 AT-TATATG-GG-TTT--GAG
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   11560 16 +     87036 AT-TATATG-GG-TTT--GAG
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11263203 16 -  35597290 AT-TATATG-GG-TTT--GAG
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11085732 16 +  39895921 AT-TATATG-GG-TTT--GAG
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16452756 16 -  44759192 AT-TATATG-GG-TTT--GAG
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21323700 18 + 157394656 ATTTATATG--G-TTAAAGAG
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135704927 18 - 157403528 ATTTATATG--G-TTAAAGAG
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_979108                    27 12 -      1248 AT-TACACTA-G-CT------
i Capromys_pilorides.CapPil_scaffold_979108             C 0 C 0
s Carlito_syrichta.NW_007248099.1                          307009 10 +    345090 AA-T-------G-CTA--gag
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               57959 15 +     67245 AT-CATATG--G-TTA--GAG
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   28447 16 +     33760 AT-TACATGG-G-CTA--GAG
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   157244 15 -    276539 AT-TACATG--G-ATA--GAA
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15784622 16 -  24422027 NT-TACACTA-G-cta--gaa
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15796554 16 -  24440124 AT-TACACTA-G-CTA--GAA
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       174745 16 +    436027 AT-TACACTA-G-CTA--GAA
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18888637 16 -  29618158 AT-TATATGG-G-GTA--GAG
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 6181 16 -     26817 AT-TATATGG-G-GTA--GAG
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                10421 16 +     25043 AT-TATATGG-G-GTA--GAG
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         6045 10 +     21754 AA-T-------G-CTA--GAG
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4362327 16 +   7569818 AT-TATATG-GG-TTA--GAG
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         2079 16 -      9338 AT-TATATG-GG-TTA--GAG
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6552560 16 +   6739814 AT-TATATGG-G-GTA--GAG
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      54037 16 -     54931 AT-TATATGG-G-GTA--GAG
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         19021 16 -     19697 AT-TATATGG-G-GTA--GAG
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         56552 16 -    107033 AT-TATATGG-G-GTA--GAG
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        2994 16 -      3853 AT-TATATGG-G-GTA--GAG
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          26930 16 +     30494 AT-TATATGG-G-GTA--GAG
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           2954 16 -      4022 AT-TATATGG-G-GTA--GAG
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          2846 16 -      3505 AT-TTTATGG-A-GTA--GAG
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           21636 16 +     35983 AT-TTTATGG-A-GTA--GAG
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11988173 16 +  12117833 AT-TATATGG-G-GTA--GAG
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46474926 16 +  46592721 AT-TTTATGG-A-GTA--GAG
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      32753 16 +     33420 AT-TTCATGG-A-GTA--GAG
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        2789 16 -      3443 AT-TATATGG-G-GTA--GAG
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      3780 16 -      4669 AT-TATATGG-G-GTA--GAG
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        3575 16 -      4411 AT-TTTATGG-A-GTA--GAG
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         3105 16 -      4205 AT-TATATGG-G-GTA--GAG
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_1070855          1314 16 -      1715 AT-TTTATGA-A-CTA--GAG
i Chaetophractus_vellerosus.ChaVel_scaffold_1070855     C 0 C 0
s Cheirogaleus_major.k141_1157592                           56948 16 -     68416 AT-TATATGG-G-ATA--GAG
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            5990 16 +     13308 AT-TATATGG-G-ATA--GAG
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             3454 16 -     18223 AT-TATATGG-G-GTA--GAG
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             20477 16 +     25473 AT-TATATGG-G-GTA--GAG
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           39516 16 +     57117 AT-TATATGG-G-GTA--GAG
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          44191 16 +     54541 AT-TATATGG-G-GTA--GAG
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15959786 16 +  43084221 AT-TACACTA-g-cta--gaa
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         69006 16 +    196370 CT-TATATGG-A-GTA--GAG
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          13186 16 +     40510 CT-TATATGG-A-GTA--GAT
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15136387 16 -  15256731 AT-TATATGG-G-GTA--TAG
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      31433 16 -     53260 AT-TATATGG-G-GTA--TAG
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101141882 16 + 101219884 AT-TATATGG-G-GTA--TAG
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                14912 16 -     21363 AT-TATATGT-A-CTA--GAG
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           760223 16 +    964067 AT-TATATGT-A-CTA--GAG
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_141308              7006 15 -     12508 AT-T-TATTG-G-CTA--GAA
i Chrysochloris_asiatica.ChrAsi_scaffold_141308         C 0 C 0
s Colobus_angolensis.KN985967.1                          10880461 16 +  10971483 AT-TATATGG-G-GTA--GAA
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147661619 16 + 156195979 AT-TATACGG-G-GTA--GAA
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            13606 16 +     23629 AT-TATATGG-G-GTA--GAA
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         37678 15 -     40477 AT-TACATG--G-TTG--GAG
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 275496 16 -    399297 AT-TATATGA-A-CTG--AAG
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53027029 16 +  72327488 AT-TACATGA-T-CTG--GAG
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             18147 15 -     19186 CT-TATCTG--G-TTA--GAA
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            49840 16 -     70449 AC-TATATG-GG-TTA--GTG
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  206192 16 -    956709 AT-TATACTC-A-CTA--GAG
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 28565 12 -     67205 AT-TATACTA-G-TT------
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                15393 16 +     26546 AT-TACACTA-G-CTA--GAA
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             56876 16 -    236241 AT-TACACTA-G-CTA--GAA
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          180122 16 -   6883506 AT-TTTATGA-A-CTA--GAG
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16842803 16 +  31942871 AT-TAAATGG-G-ATA--GAG
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80035296 17 -  96802777 AT-TATATG--G-TTAATAAG
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18697269 15 -  18957592 AT-CATATG--A-TTA--gag
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 320975 16 +    993696 AT-TATATG-GG-TTA--GAG
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   1626 16 +    151128 AT-TATATG-GG-TTA--GAG
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   155669 16 +    228994 AA-TACACTA-G-CTA--GAA
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3653402 17 +   4240102 AT-TATGTGA-TAGTA--AAG
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 24954 17 +     28912 AT-TATGTGA-TAGTA--AAG
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                34137 16 -     73477 AT-TACACTA-G-CTA--GAA
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Eidolon_helvum.KE772537.1                                 10644 15 +     24177 AT-CATATG--G-TTA--GAG
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1489958 18 +   1727528 ATTTATATG--G-TTAATGAG
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7804708 16 +  15467074 GT-TACATGG-G-TTA--GAA
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        237687 16 -    369425 AT-TATATGA-T-CTG--GAG
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           4700 16 -      7838 AT-TATATGA-T-CTG--GAG
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85869616 16 +  99434291 AT-TATATG-GG-TTA--GAG
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4702229 14 +   6522550 AT-CAT-CA--G-TTA--GAG
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5851134 16 -   7175178 AT-TTTGTG-GG-TTG--Gag
i Equus_asinus.JREZ01000062.1                           C 0 I 263
s Equus_caballus.CM000402.2                              13349637 16 +  41866177 AT-TTTGTG-GG-TTG--Gag
i Equus_caballus.CM000402.2                             C 0 I 263
s Equus_przewalskii.ATBW01073585.1                          11127 16 +     92910 AT-TTTGTG-GG-TTG--Gag
i Equus_przewalskii.ATBW01073585.1                      C 0 I 263
s Erinaceus_europaeus.JH835290.1                         11530926 15 +  16010500 AT-TATCTG--G-TTA--GAT
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48768565 16 -  48907691 AT-TATATGG-G-GTA--TAG
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          313497 17 +    330699 AT-TATATG--G-TTAATGAG
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             59928 17 +     89355 AT-TATATG--G-TTAATGAG
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              2994 16 +     13586 AT-TATATGG-G-ATA--GAG
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               2929 16 -      6809 AT-TATATGG-G-ATA--GAG
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             9405 16 +     36558 AT-TATATGG-G-ATA--GAG
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             5719 16 +     60246 AT-TATATGG-G-ATA--GAG
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 9202 16 +    109717 AT-TATATGG-G-ATA--GAG
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               13581 16 +     16540 AT-TATATGG-G-ATA--GAG
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                13857 16 +     27497 AT-TATATGG-G-GTA--GAG
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           16323 16 +     26808 AT-TATATGG-G-ATA--GAG
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                31047 16 +     46535 AT-TATATGG-G-ATA--GAG
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              13770 16 -     29447 AT-TATATGG-G-ATA--GAG
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129890803 16 - 159252932 AT-TATATG-GG-TTA--GAG
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129277874 16 - 158578461 AT-TATATG-GG-TTA--GAG
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 19013 16 +     52776 AT-TATATG-GG-TTA--GAG
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13890733 16 -  19261668 AC-TACACCA-g-cca--gaa
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     208908 12 -    847004 A-----AAGA-G-ACA--GAG
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           11289 12 -     43889 A-----AAGA-G-ACA--GAG
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           8353 12 +     27357 A-----AAGA-G-ACA--GAG
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               154267 16 +    324696 AT-TATATGG-G-CTA--GAG
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    179473 18 -    189561 ATTTATATG--G-TTGATGAG
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           10674 16 -     18683 AT-TCTATGT-G-CTA--CAG
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               3149 16 -     14630 AT-TATGTGG-G-GTA--GGT
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119650248 16 - 195582420 AT-TATGTGG-G-GTA--GGT
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   75205 16 +    118900 AT-TCTATGG-G-ATA--GAG
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                         3554 16 +      3980 AT-TATATGG-G-ATA--GAG
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             26030 16 +     26611 AT-TATATGG-G-ATA--GAG
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             3490 16 +     56096 AT-TATATGG-G-ATA--GAG
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        26767 16 -     42470 AT-TATATGG-G-ATA--GAG
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        43361 16 -     54384 AT-TATATGG-G-ATA--GAG
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              15049 16 +     53719 AC-TATACG-GA-ATA--GAG
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                25972 18 -     91191 ATTTATATG--G-TTAATGAG
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2549119 16 +  31725842 AT-TACACTA-g-cta--gaa
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               54525 16 +     73687 AT-TATATGA-A-CTA--GAA
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              145537 17 +    277961 AT-CATATG--G-TTAATGAG
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      276881 15 -    477199 AT-TAAATG--G-TTA--AAG
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              6039 15 -      9143 AT-TATATG--G-TTA--AAG
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      2411 16 -   7690867 AT-TATATGG-G-GTG--GAG
i Hoolock_leuconedys.ctg79                                 C 0 I 2
s Hyaena_hyaena.HyaHya_flattened_line_20729                 14104 16 -     67322 AC-TATATG-GA-TAA--AAT
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           17038 16 -    119109 AT-TACACTA-G-CTA--GAA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              2970 16 +      5897 AT-TATATGG-G-GTG--GAG
i Hylobates_abbotti.k141_493872                         C 0 I 2
s Hylobates_agilis.k141_1485652                              1391 16 -      1697 AT-TATATGG-G-GTG--GAG
i Hylobates_agilis.k141_1485652                         C 0 I 2
s Hylobates_klossii.k141_466549                              9415 16 +     11537 AT-TATATGG-G-GTG--GAG
i Hylobates_klossii.k141_466549                         C 0 I 2
s Hylobates_pileatus_b.ContigUN                                 14622516 16 -  25970782 AT-TATATGG-G-GTG--GAG
i Hylobates_pileatus_b.ContigUN                                C 0 I 2
s Hylobates_muelleri.k141_1133650                            2405 16 -      2775 AT-TATATGG-G-GTG--GAG
i Hylobates_muelleri.k141_1133650                       C 0 I 2
s Hylobates_pileatus_a.tarseq_592                             31903 16 -     60944 AT-TATATGG-G-GTG--GAG
i Hylobates_pileatus_a.tarseq_592                         C 0 I 2
s Hystrix_cristata.HysCri_scaffold_50788                     4170 13 +     22540 AT-TACACTA-G-CTA-----
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7124038 16 +  13083262 AT-TATATAG-G-Cta--gaa
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_1884019                                   1234 16 -      2196 AT-TATATGG-G-ATA--GAG
i Indri_indri.k141_1884019                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               7284 17 +     17520 AT-TATATG--G-TTAATAAG
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8563569 16 +  11848649 GC-TGTATGa-t-cca--taa
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               22109 17 +     37189 AT-TATATG--G-TTAATGAG
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          48012 16 -    147782 AT-TATATGG-G-GTA--GAG
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   112023 14 -    115756 AT-CAT-CA--G-TTA--GAG
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258405050 16 - 285822530 AT-TATATGG-G-ATA--GAG
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        21920 16 +     39228 AT-TATATGG-G-ATA--GAG
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            51295 16 +     63517 AT-TATATGG-G-ATA--GAG
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        76538 16 +    116806 AT-TATATGG-G-ATA--GAG
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     29559 16 -     33031 AT-TATATGG-G-ATA--GAG
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3083828 16 -   3498232 AT-TATATG-GG-TTA--GAG
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    11026 15 +     22452 AA-TACATA--G-CTA--GAA
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            134444 17 +   3060487 AT-TATATG--G-TTAATAAG
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19245648 16 +  19376315 AT-TATATGG-G-GTA--GAG
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            8653 12 +     84689 A-----AAGA-G-ACA--AAG
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3776404 12 +   6799190 A-----AAGA-G-ACA--AAG
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20589309 16 -  62548349 AT-TATATGG-A-TTA--GAA
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11085188 16 +  39895028 AT-TATATG-GG-TCT--GAG
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             17334 16 +     74745 AT-TATATGG-G-GTA--GAG
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12703840 16 +  12821369 AT-TATATGG-G-GTA--GAG
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               5936 16 +      6569 AT-TATATGG-G-GTA--GAG
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           44238 16 +     63263 AT-TATATGG-G-GTA--GAG
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_925451                                  246 16 +     10231 AT-TATATGG-G-GTA--GAG
i Macaca_fuscata.k119_925451                            C 0 C 0
s Macaca_leonina.k141_3421209                                2387 16 +      3017 AT-TATATGG-G-GTA--GAG
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_mulatta.NC_041755.1                            196032917 16 + 196197964 AT-TATATGG-G-GTA--GAG
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11443023 16 +  11645122 AT-TATATGG-G-GTA--GAG
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_radiata.k141_1580474                                2777 16 -      3617 AT-TATATGG-G-GTA--GAG
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 13109 16 -     55006 AT-TATATGG-G-GTA--GAG
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43838146 16 +  43892939 AT-TATATGG-G-GTA--GAG
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                5368 16 -      5978 AT-TATATGG-G-GTA--GAG
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                700062 15 +    802869 AT-CATATG--G-TTA--AAG
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43434808 16 -  43563597 AT-TATATGG-G-GTA--GAG
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4447634 16 -   4543643 AT-TATATGG-G-GTA--GAG
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            144552 16 +    252755 AT-TATACA-CG-TTA--GAG
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             34624 16 +     58827 AT-TATACA-CA-TTA--GAG
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36871873 16 +  64221397 AT-TATATAG-G-CTA--GAA
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       62721 15 -    234502 AT-TATATG--G-TTA--GAG
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_146202             426 16 -      1999 AT-TATATG-GG-TTA--GAG
i Mellivora_capensis.MelCap_flattened_line_146202       C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233                9984 12 +     15977 -----GATGC-T-CTG--GAG
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1044768 16 -  26018355 AT-TACATGA-T-CTG--GAG
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_183284                   2154 12 +      2166 AT-TATATG--G-TTA-----
i Mesoplodon_bidens.MesBid_scaffold_183284              C 0 T 255
s Microcebus_murinus.CM007691.1                          16508170 16 +  47401472 AT-TATATGG-T-ATA--GAG
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  29442  7 -     48017 AT-TCTGG-------------
i Microgale_talazaci.MicTal_scaffold_34660              C 0 I 4
s Micronycteris_hirsuta.MicHir_scaffold_37978               21136 15 -     32043 AT-CACATG--G-TTA--GAG
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22817887 16 -  98408828 AT-TACATGA-T-CTG--GAG
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8207897 15 +  10048721 CT-CATATG--G-TTG--GGG
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            32569 15 +     45743 CT-CATATG--G-TTG--GGG
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        33467 16 +     34273 AT-TATATGG-G-GTA--GAG
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         9134 16 -    104932 AT-TATATG-GG-CTA--GAG
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     3575 16 +      8497 AT-TATATGT-G-ATA--GAG
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 144879 17 +    154973 AT-TATATG--G-TTAATAAG
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                159647 15 +    265003 AT-CATATG--G-TTA--CAG
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 3060 18 -      4346 ATGTATATG--G-TTAATGAG
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  142742 16 -    168139 AC-TATATG-GG-ATA--GAG
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          17537 14 -    100666 AT-CCT-CA--G-TTA--GAG
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70764399 16 +  92629107 AT-TATATGA-T-CTG--AAG
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75487436 16 +  98207768 AT-TATATGA-C-CTG--AAG
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67553608 16 +  89017189 tt-tatatGA-T-CTG--AAG
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74328617 16 +  97876770 AT-TATATGA-C-CTG--AAG
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              9158 16 +     98495 GT-TCTGTAG-G-CTA--GAG
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4421998 16 -  28371801 AT-TATATG-GG-TTA--GAG
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     88094 12 -    117718 AT-TATACTA-T-CT------
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               965858 14 +   8389877 AT-CAT-CA--G-TTA--GAG
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5017549 14 +   6462685 AT-CAT-CA--G-tca--aag
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3463445 14 -   3747815 AT-CAT-CA--G-GTA--GAG
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         8640 14 +     66751 AT-CAT-CA--G-TCA--AAG
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Nannospalax_galili.KL201303.1                            108491 16 +    362372 AT-TATATGA-C-CTA--GAG
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               5847 16 +     48152 AT-TATATGG-G-GTA--GAG
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4482733 16 -  14209539 AT-TATATG-GG-TTA--GAG
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3949492 17 -   4490290 AT-TATATG--G-TTAATAAG
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  47762 15 +     94413 AT-CATATG--G-TTA--GAG
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1439838                            718 16 +      3718 AT-TATATGG-G-GTG--GAG
i Nomascus_annamensis.k141_1439838                      C 0 I 2
s Nomascus_concolor.k141_49591                                941 16 +      2014 AT-TATATGG-G-GTG--GAG
i Nomascus_concolor.k141_49591                          C 0 I 2
s Nomascus_gabriellae.k141_906566                            2269 16 -      2544 AT-TATATGG-G-GTG--GAG
i Nomascus_gabriellae.k141_906566                       C 0 I 2
s Nomascus_siki_b.tarseq_80                             22745 16 -  18771707 AT-TATATGG-G-GTG--GAG
i Nomascus_siki_b.tarseq_80                         C 0 I 2
s Nomascus_siki_a.k141_595747                                   494 16 +      4512 AT-TATATGG-G-GTG--GAG
i Nomascus_siki_a.k141_595747                             C 0 I 2
s Nyctereutes_procyonoides.CAJHUB010000786.1                28181 16 +   3668941 AT-TATATG-GG-TTT--GAG
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65564999 10 -  95554990 A-----AAGA-G-AC----AG
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            1844 10 +      6470 A-----AAGA-G-AC----AG
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65667369 10 +  89412551 A-----AAGA-G-AC----AG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4993988 16 -  23139505 CA-TATTTAG-G-CTA--GAC
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3683587 12 +  10294119 at-tacatta-t-tt------
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             677389 16 -   3126709 AT-TATATG-GG-TTA--GAG
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1078188 18 +   1425656 ATTTATATG--G-TTAATGAG
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         35343 18 +     78940 ATTTATATG--G-TTGATGAG
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  123161 16 +    145789 AT-TATATGA-T-CTG--GAG
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  34931 15 +     62360 AT-TATATGA-T-CCA--GA-
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7223176 17 -   7562323 AT-TATATG--G-TTAATAAG
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              41560 16 -     66828 AT-TATGTGG-G-CTA--CAA
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141873684 16 + 163896628 AA-TACATAG-G-CTA--GAA
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      305520 16 -    505867 AT-TATATG-GG-TTT--GAG
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       36996 12 +     38679 A-----AAGA-G-ACA--GAG
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18006438 12 -  38779656 A-----ACGA-G-ACA--GAG
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134075765 18 - 275406953 ATTTATATG--G-TTAATGAG
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      76979 18 +    140051 ATTTATATG--G-TTAATGAG
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127572493 16 - 205426864 AT-TATATGG-G-GTA--GAT
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120149646 16 - 196562556 AT-TATATGG-G-GTA--GAT
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  32205 16 +    295523 AT-TATATG-GG-TTA--GAG
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3635939 16 +  18214204 AT-TATATG-GG-TTA--GAG
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5025586 16 -   6340057 AT-TATATG-GG-TTA--GAG
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1064626 18 -   1292953 ATTTATATG--G-TTAATGAG
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188153592 16 - 188283584 AT-TATATGG-G-GTA--GAG
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            49804 16 +     76494 AT-TATATGG-G-GTA--GAG
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47510989 16 +  47705337 AT-TATATGG-G-GTA--GAG
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 64966 16 -    104429 AT-TATATGG-G-GTA--GAG
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  14757 16 -     29451 AT-TATATGG-G-GTA--GAG
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                35160 16 +     35859 AT-TATATGG-G-GTA--GAG
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113504 16 -    135482 AT-TATATA-GG-CTA--GAG
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           3046 12 -     23713 A-----AAGA-G-ACA--AAG
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            22345 12 -     27972 A-----AAGA-G-ACA--AAG
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      40952 10 -     45160 -------TGG-T-GTA--GAG
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4948092 16 -   8017169 AT-TATATGA-T-CCG--GAG
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    10272 16 -     36578 AT-TGCACTA-G-CTA--GAA
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            119793 17 -    122454 AT-TATATG--G-TTAATAAG
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           2850 16 -      3310 AT-TATATGG-G-GTA--GAG
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       22755 16 -     82327 AT-TATATGG-G-GTA--GAG
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           19502 16 +     19957 AT-TATATGG-G-GTA--GAG
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26737516 16 +  26888534 AT-TATATGG-G-GTA--GAG
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            95308 14 +    112873 AT-CAT-CA--T-TTA--GAG
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             41493 16 -     61926 AT-TATATGG-A-GTA--GAG
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        22922 16 +     78826 AT-TATATGG-A-GTA--GAG
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              6873 16 -     15800 AT-TATATGG-A-GTA--GAG
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        10071 16 -     16101 AT-TATATGG-A-GTA--GAG
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          3380 16 +      9673 AT-TATATGG-A-GTA--GAG
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13472374 16 -  19735023 AT-TATATGG-A-GTA--GAG
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           11282 16 -     31692 AT-TATATGG-A-GTA--GAG
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           3859 17 +     21690 AT-TACATG--G-TTAATGAG
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       20719 16 +     44506 AT-TATATGG-G-GTA--GAG
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        20929 16 +     67491 AT-TACATGG-G-GTA--GAG
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      11170 16 -     98129 AT-TATATGG-G-GTA--GAG
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     20775 16 +    147771 AT-TATATGG-G-GTA--GAG
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        21025 16 -     23762 AT-TATATGG-G-GTA--GAG
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          1491 16 -     55515 AT-TATATGG-G-GTA--GAG
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         20844 16 +    152463 AT-TATATGG-G-GTA--GAG
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      7604 16 +      8943 AT-TATATGG-G-GTA--GAG
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                         10564 16 +    134592 AT-TATATGG-G-GTA--GAG
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          21154 16 -     75465 AT-TATATGG-G-GTA--GAG
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              185041 16 -    373494 AT-TATATGG-G-GTA--GAT
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19804949 16 +  19899266 AT-TATATGG-G-GTA--GAT
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               3085 16 -     15069 AT-TATATGG-G-GTA--GAG
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              3219 16 +     14865 AT-TATATGG-G-GTA--GAG
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                74389 16 +     78963 AT-TATATGA-A-CTA--GAA
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6846426 16 +  12164890 AT-TATATGG-G-ATA--GAG
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    665043 16 -   2312742 NN-NNNNNNN-N-NNN--NNN
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         1569 16 +     11805 AT-TATATGG-G-ATA--GAG
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           40904 16 +     52369 AT-TATATGG-G-ATA--GAG
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         33293 16 -     44753 AT-TATATGG-G-ATA--GAG
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            15214 16 +     27322 AT-TATATGG-G-ATA--GAG
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       14853 16 -     53241 AT-TATATGG-G-ATA--GAG
i Propithecus_tattersalli.k141_907138                   C 0 I 2
s Propithecus_verreauxi.k141_158021                         37124 16 -     48185 AT-TATATGG-G-ATA--GAG
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           31523 12 +     77221 -----GATGG-T-CTG--GAG
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            2316 15 -     27784 AT-CATATG--G-TTa--gag
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        244093 16 -    344369 AT-TATATG-GG-TTA--GAG
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13244445 15 -  17261082 AT-CATATG--G-TTA--GAG
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             602395 15 -   3946241 AT-CATATG--G-TTA--GAG
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131532167 16 - 161321710 AT-TATATG-GG-TTA--GAG
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             27214 16 +     56732 AT-TATATGG-G-GTA--GAG
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6803705 16 +   6970761 AT-TATATGG-G-GTA--GAG
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             3098 16 +     18040 AT-TATATGG-G-GTA--GAG
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                14266 18 +     68503 ATTTATATG--G-TTAATGAG
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13913492 16 +  90463843 AT-TACATGA-T-CTG--AAG
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1786259 15 +   2252614 AT-TATATG--T-TTA--AAG
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           13651 16 -     14454 AT-TATATGG-G-GTA--GAG
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206374977 16 - 206558726 AT-TATATGG-G-GTA--GAG
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44853877 16 -  45163003 AT-TATATGG-G-GTA--GAG
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                17735 15 +    109198 AT-CATATG--G-TTA--GAG
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       6071 18 +     12214 ATTTATATG--A-TTAATGAG
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15670612  2 -  43202129 -------------------AG
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        2478  2 +     34089 -------------------AG
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              2419  2 -     60842 -------------------AG
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              2514  2 +     67014 -------------------AG
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              2492  2 +     60816 -------------------AG
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 2429  2 -     76454 -------------------AG
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17339165 16 -  30362882 AT-TATATGG-C-GTA--GAG
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         18540 16 -     62485 AT-TATATGG-C-GTA--GAG
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   29821 15 -    114521 AT-TACATG--G-TTG--GAG
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1527475                       25639 16 +     26421 AT-TATATGG-G-GTA--GAT
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       6099 16 +     20762 AT-TATATGG-G-GTA--GAG
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         39834 16 +     40653 AT-TATATGG-G-GTA--GAT
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                           10391 16 -     12194 AT-TATATGG-G-GTA--GAG
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     23813 16 -     27512 AT-TATATGG-G-GTA--GAT
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         32832 16 -     33692 AT-TATATGG-G-GTA--GAG
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   97700 16 -    120886 AT-TATGTGA-T-CTA--GAG
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            16463 10 +    739146 AT-CATAAA--G-T-------
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 I 1
s Sorex_araneus.JH798170.1                               17748675 15 -  27805282 CT-TCTTTT--G-TTA--GAA
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2237954 16 +   2842873 AT-TATATAG-G-CTA--GAA
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             232850 16 -    276980 AT-TATATG-GG-TTA--GAG
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            25409 16 +     62062 AC-TATATG-GG-ATA--GAG
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189270316 15 + 218635234 AT-AACATG--G-ATA--GAA
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        12768 16 -  13920577 AT-TATATGG-G-GTG--GAG
i Symphalangus_syndactylus.tarseq_24                    I 17 I 2
s Tadarida_brasiliensis.TadBra_scaffold_145589               4263 15 -      6213 AT-CATACG--A-TTA--GAG
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      805185 16 +   1148477 AT-TATATG-GG-TTA--GAG
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  55845 16 +     99546 AT-TATATG-GG-TTA--GAG
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               24492 10 +     42269 AA-T-------G-CTA--GAG
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               57808 10 +     65473 AA-T-------G-CTA--GAG
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194005128 16 - 194193292 AT-TATATGG-G-GTA--GAG
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             37331 16 -     47444 CT-TATACTA-C-CTG--GAA
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  2064 16 +      6782 AT-TTTATGA-A-CTA--GAG
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  134325 15 -    259118 AT-CATATG--G-TTA--CAG
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        24209 16 +     38948 AT-TATATGG-G-GTA--GAG
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   17936 16 -     32910 AT-TATATGG-G-GTA--GAG
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       23834 16 +     24652 AT-TATATGG-G-GTA--GAG
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      2712 16 -      3559 AT-TATATGG-G-GTA--GAT
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           40657 16 -     54611 AT-TATATGG-G-GTA--GAG
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       16657 16 +     17312 AT-TATATGG-G-GTA--GAG
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    24020 16 -     25040 AT-TATATGG-G-GTA--GAG
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          2681 16 +      3528 AT-TATATGG-G-GTA--GAG
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  49048 16 +     51589 AT-TATATGG-G-GTA--GAT
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       12224 16 +     14732 AT-TATATGG-G-GTA--GAG
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       2701 16 -     28054 AT-TATATGG-G-GTA--GAG
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44657496 16 -  44834318 AT-TATATGG-G-GTA--GAG
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        2506 16 +      3372 AT-TATATGG-G-GTA--GAG
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   3671 17 +     90398 AT-TATACG--G-TTAATGAG
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16079771 14 +  31416278 ---TATATGG-A-CTC--GAA
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2790164 16 -   3938065 AT-TACATgg-g-cta--aaa
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    2684 16 +     13056 AT-TACATGG-G-CTA--AAA
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69311893 17 -  96451834 AT-TATATG--G-TTAATAAG
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 25017 15 -     25548 AT-TATATA--G-TTG--TAG
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6512648 16 +  28682327 AT-TATATG-GG-CTA--GAG
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  3267 16 -     20643 AT-TATATGG-G-ATA--GAG
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             22811 16 -     33872 AT-TATATGG-G-ATA--GAG
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1523128 15 -   2331223 AT-TATATG--g-tta--gaa
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                135589 16 -    281493 AT-TATATG-GG-TTT--GAG
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       125053 16 -    134049 AT-TATATGG-G-CTA--GAG
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        212119 16 -    227762 AT-TATATG-GG-TTA--GAG
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     13285 16 -     20485 AC-TATATGG-T-CCA--TAG
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           5390 17 -      8775 AT-TATATG--G-TTAATGAG
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Tamandua_tetradactyla.TamTet_scaffold_26877               13207  0 +     45698 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3531  0 -      8794 C
e Echinops_telfairi.AAIY02274224.1                            507 14 +      1655 I
e Condylura_cristata.JH655880.1                          60611207  0 +  78930452 C
e Macaca_tonkeana.k141_2870633                               2864 158 -     27140 T
e Macaca_nigra.k141_282495                                   2859 158 -     46448 T
e Macaca_maura.k141_251854                                  43912 158 -     79256 T

a score=0.000000
s hg38.chr4_GL000008v2_random                                9767 6 +    209709 AA---T-TTA
s Acinonyx_jubatus.LLWD01000356.1                         2031843 6 +   3721120 AA---T-TTG
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    110519 6 -    189883 AA---T-CTG
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10655178 6 +  23371972 AA---T-TTA
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7091900 6 -  16596857 AA---T-TTA
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   10845 6 -     22067 AA---T-TTA
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_3103707                  60784 6 +     61638 AA---T-TTA
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        52592 6 +     53391 AA---T-TTA
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         3317 6 +     72529 AA---T-TTA
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          2892 6 +      3797 AA---T-TTA
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             8065 6 -     18050 AA---T-TTA
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  9178 6 -     11521 AA---T-TTA
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              8742 6 -     21359 AA---T-TTA
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_298055                                   33 6 +      1823 AA---T-TTA
i Alouatta_juara.k141_298055                            C 0 C 0
s Alouatta_macconnelli.k141_1331706                          8033 6 -     10438 AA---T-TTA
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            4689 6 +      7047 AA---T-TTA
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             7975 6 +     10410 AA---T-TTA
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            1778 6 -      4927 AA---T-TTA
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             4708 6 +      6429 AA---T-TTA
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3518647 6 +   4113121 AA---T-TTA
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      388780 6 -    631301 AA---T-TTA
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            29213 6 +     33004 AA---T-TTA
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 60428 6 +     78111 AA---T-TTC
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            3367 6 +     22701 AA---T-TTC
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5747324 6 +   9889416 AA---T-TTC
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             3909 6 -    104377 AA---T-TTC
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               3915 6 +     23246 AA---T-TTC
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     1929 6 +      5067 AA---T-TTA
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      15865 6 +     17483 AA---T-TTA
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 7176 6 -     29036 AA---T-TTA
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9537159 6 +  39197703 AA---T-TTA
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             58443 6 +     85812 AA---T-TTA
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 9442 6 +     89302 AA---T-TTA
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             13947 6 -     58268 AA---T-TTA
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             61938 6 +    119057 AA---T-TTA
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               3907 6 -     25888 AA---T-TTA
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 4659 6 -     16375 AA---T-TTA
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                               979 6 +      2719 AA---T-TTA
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26378627 6 +  51448160 AA---T-TTA
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        3859 6 -     13118 AA---T-TTA
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   41709 6 -     72089 AA---T-TTA
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6557720 6 +   6870073 AA---T-TTA
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138137959 6 - 161108492 AA---T-TTA
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     570333 6 -    998990 AA---T-TTA
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136293692 6 - 158972876 AA---T-TTA
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1229448 6 -   1914593 AA---T-TTA
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               111800 6 -    171031 AA---T-TTA
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 10826 6 +    125063 AA---T-TTA
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                12874 6 -    216513 AA---T-TTA
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        5414 6 -    134917 AA---T-TTA
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3218034 6 -   8989139 at---t-tta
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           395739 6 -  15254737 at---t-tta
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2971472 6 +   6889770 at---t-tta
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11516558 6 +  39901454 AA---T-TTA
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   11576 6 +     87036 AA---T-TTA
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11263219 6 -  35597290 AA---T-TTA
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11085748 6 +  39895921 AA---T-TTA
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16452772 6 -  44759192 AA---T-TTA
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21323718 6 + 157394656 AA---T-TTA
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135704945 6 - 157403528 AA---T-TTA
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_979108                    39 1 -      1248 ---------A
i Capromys_pilorides.CapPil_scaffold_979108             C 0 C 0
s Carlito_syrichta.NW_007248099.1                          307019 6 +    345090 aa---t-tta
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               57974 6 +     67245 AA---T-TTA
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   28463 6 +     33760 GA---T-TTA
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   157259 6 -    276539 AA---C-TTA
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15784638 6 -  24422027 ta---t-tta
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15796570 6 -  24440124 TA---T-TTA
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       174761 6 +    436027 TA---T-TTA
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18888653 6 -  29618158 AA---C-TTA
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 6197 6 -     26817 AA---C-TTA
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                10437 6 +     25043 AA---C-TTA
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         6055 6 +     21754 AA---C-TTA
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4362343 6 +   7569818 AA---T-TTA
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         2095 6 -      9338 AA---T-TTA
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6552576 6 +   6739814 AA---T-TTA
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      54053 6 -     54931 AA---T-TTA
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         19037 6 -     19697 AA---T-TTA
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         56568 6 -    107033 AA---T-TTA
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        3010 6 -      3853 AA---T-TTA
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          26946 6 +     30494 AA---T-TTA
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           2970 6 -      4022 AA---T-TTA
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          2862 6 -      3505 AA---T-TTA
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           21652 6 +     35983 AA---T-TTA
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11988189 6 +  12117833 AA---T-TTA
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46474942 6 +  46592721 AA---T-TTA
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      32769 6 +     33420 AA---T-TTA
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        2805 6 -      3443 AA---T-TTA
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      3796 6 -      4669 AA---T-TTA
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        3591 6 -      4411 AA---T-TTA
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         3121 6 -      4205 AA---T-TTA
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_1070855          1330 6 -      1715 AA---T-TTA
i Chaetophractus_vellerosus.ChaVel_scaffold_1070855     C 0 C 0
s Cheirogaleus_major.k141_1157592                           56964 6 -     68416 AA---T-TTA
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            6006 6 +     13308 AA---T-TTA
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             3470 6 -     18223 AA---T-TTA
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             20493 6 +     25473 AA---T-TTA
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           39532 6 +     57117 AA---T-TTA
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          44207 6 +     54541 AA---T-TTA
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15959802 6 +  43084221 ta---t-tta
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         69022 6 +    196370 AA---T-TTA
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          13202 6 +     40510 AA---T-TTA
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15136403 6 -  15256731 AA---T-TTA
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      31449 6 -     53260 AA---T-TTA
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101141898 6 + 101219884 AA---T-TTA
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                14928 6 -     21363 AA---T-TTA
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           760239 6 +    964067 AA---T-TTA
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_141308              7021 6 -     12508 AA---T-TTA
i Chrysochloris_asiatica.ChrAsi_scaffold_141308         C 0 C 0
s Colobus_angolensis.KN985967.1                          10880477 6 +  10971483 AA---T-TTA
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147661635 6 + 156195979 AA---T-TTA
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            13622 6 +     23629 AA---T-TTA
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         37693 6 -     40477 AA---T-TTA
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 275512 6 -    399297 AA---T-CTG
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53027045 6 +  72327488 AA---T-TAA
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             18162 6 -     19186 AA---T-TAA
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            49856 6 -     70449 AA---T-TTG
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  206208 6 -    956709 TA---T-TTA
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 28577 1 -     67205 ---------A
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                15409 6 +     26546 TA---T-TTA
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             56892 6 -    236241 TA---T-TTA
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          180138 6 -   6883506 AA---T-TTA
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16842819 6 +  31942871 AA---T-TTA
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80035313 6 -  96802777 AA---T-TCA
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18697284 6 -  18957592 aa---t-tta
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 320991 6 +    993696 AA---T-TTA
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   1642 6 +    151128 AA---T-TTA
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   155685 6 +    228994 TA---T-TTA
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3653419 6 +   4240102 AA---T-TTA
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 24971 6 +     28912 AA---T-TTA
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                34153 6 -     73477 TA---T-TTA
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Eidolon_helvum.KE772537.1                                 10659 6 +     24177 AA---T-TTA
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1489976 6 +   1727528 AA---T-TTA
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7804724 6 +  15467074 AA---T-CTT
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        237703 6 -    369425 AA---T-CGG
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           4716 6 -      7838 AA---T-CAG
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85869632 6 +  99434291 AA---T-TTA
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4702243 6 +   6522550 AA---T-TTA
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5851413 6 -   7175178 AA---T-TTA
i Equus_asinus.JREZ01000062.1                           I 263 C 0
s Equus_caballus.CM000402.2                              13349916 6 +  41866177 AA---T-TTA
i Equus_caballus.CM000402.2                             I 263 C 0
s Equus_przewalskii.ATBW01073585.1                          11406 6 +     92910 AA---T-TTA
i Equus_przewalskii.ATBW01073585.1                      I 263 C 0
s Erinaceus_europaeus.JH835290.1                         11530941 6 +  16010500 AA---T-TTA
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48768581 6 -  48907691 AA---T-TTA
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          313514 6 +    330699 AA---T-TTA
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             59945 6 +     89355 AA---T-TTA
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              3010 6 +     13586 AA---T-TTA
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               2945 6 -      6809 AA---T-TTA
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             9421 5 +     36558 -A---T-TTA
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             5735 6 +     60246 AA---T-TTA
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 9218 6 +    109717 AA---T-TTA
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               13597 6 +     16540 AA---T-TTA
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                13873 6 +     27497 AA---T-TTA
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           16339 6 +     26808 AA---T-TTA
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                31063 6 +     46535 AA---T-TTA
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              13786 6 -     29447 AA---T-TTA
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129890819 6 - 159252932 AA---T-TTG
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129277890 6 - 158578461 AA---T-TTG
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 19029 6 +     52776 AA---T-TTG
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13890749 6 -  19261668 ta---t-tta
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     208920 6 -    847004 AA---T-TTA
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           11301 6 -     43889 AA---T-TTA
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           8365 6 +     27357 AA---T-TTA
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               154283 6 +    324696 AA---T-TTA
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    179491 6 -    189561 AA---T-TTA
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           10690 6 -     18683 AA---T-TTA
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               3165 6 -     14630 AA---T-TTA
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119650264 6 - 195582420 AA---T-TTA
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   75221 6 +    118900 AA---T-TCA
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                         3570 6 +      3980 AA---T-TTA
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             26046 6 +     26611 AA---T-TTA
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             3506 6 +     56096 AA---T-TTA
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        26783 6 -     42470 AA---T-TTA
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        43377 6 -     54384 AA---T-TTA
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              15065 6 +     53719 AA---T-TTG
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                25990 6 -     91191 AA---T-TTA
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2549135 6 +  31725842 ta---t-tta
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               54541 6 +     73687 AA---T-TTA
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 I 11
s Hippopotamus_amphibius.HipAmp_scaffold_1308              145554 6 +    277961 AA---T-TTA
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      276896 6 -    477199 AA---T-TTA
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              6054 6 -      9143 AA---T-TTA
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      2429 4 -   7690867 -----T-TTA
i Hoolock_leuconedys.ctg79                                 I 2 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 14120 7 -     67322 AA---TTTTG
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           17054 6 -    119109 TA---T-TTA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              2988 4 +      5897 -----T-TTA
i Hylobates_abbotti.k141_493872                         I 2 C 0
s Hylobates_agilis.k141_1485652                              1409 4 -      1697 -----T-TTA
i Hylobates_agilis.k141_1485652                         I 2 C 0
s Hylobates_klossii.k141_466549                              9433 4 +     11537 -----T-TTA
i Hylobates_klossii.k141_466549                         I 2 C 0
s Hylobates_pileatus_b.ContigUN                                 14622534 4 -  25970782 -----T-TTA
i Hylobates_pileatus_b.ContigUN                                I 2 C 0
s Hylobates_muelleri.k141_1133650                            2423 4 -      2775 -----T-TTA
i Hylobates_muelleri.k141_1133650                       I 2 C 0
s Hylobates_pileatus_a.tarseq_592                             31921 4 -     60944 -----T-TTA
i Hylobates_pileatus_a.tarseq_592                         I 2 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     4183 5 +     22540 -A---T-TTA
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7124054 6 +  13083262 aa---t-tta
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_1884019                                   1250 6 -      2196 AA---T-TTA
i Indri_indri.k141_1884019                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               7301 6 +     17520 AA---T-TTA
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8563585 6 +  11848649 aa---t-tta
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               22126 6 +     37189 AA---T-TTA
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          48028 6 -    147782 AA---T-TTC
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   112037 6 -    115756 AA---T-TTA
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258405066 6 - 285822530 AA---T-TTA
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        21936 6 +     39228 AA---T-TTA
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            51311 6 +     63517 AA---T-TTA
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        76554 6 +    116806 AA---T-TTA
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     29575 6 -     33031 AA---T-TTA
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3083844 6 -   3498232 AA---T-TTA
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    11041 6 +     22452 AA---T-TAG
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            134461 6 +   3060487 AA---T-TTA
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19245664 6 +  19376315 AA---T-TTA
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            8665 6 +     84689 AA---T-TTA
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3776416 6 +   6799190 AA---T-TTA
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20589325 6 -  62548349 AC---T-TTA
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11085204 6 +  39895028 AA---T-TTA
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             17350 6 +     74745 AA---T-TTA
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12703856 6 +  12821369 AA---T-TTA
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               5952 6 +      6569 AA---T-TTA
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           44254 6 +     63263 AA---T-TTA
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_925451                                  262 6 +     10231 AA---T-TTA
i Macaca_fuscata.k119_925451                            C 0 C 0
s Macaca_leonina.k141_3421209                                2403 6 +      3017 AA---T-TTA
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_mulatta.NC_041755.1                            196032933 6 + 196197964 AA---T-TTA
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11443039 6 +  11645122 AA---T-TTA
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_radiata.k141_1580474                                2793 6 -      3617 AA---T-TTA
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 13125 6 -     55006 AA---T-TTA
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43838162 6 +  43892939 AA---T-TTA
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                5384 6 -      5978 AA---T-TTA
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                700077 6 +    802869 AA---T-TTA
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43434824 6 -  43563597 AA---T-TTA
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4447650 6 -   4543643 AA---T-TTA
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            144568 6 +    252755 AA---T-TTA
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             34640 6 +     58827 AA---T-TTA
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36871889 6 +  64221397 AA---T-TTA
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       62736 6 -    234502 GA---T-TTA
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_146202             442 6 -      1999 AA---T-TTA
i Mellivora_capensis.MelCap_flattened_line_146202       C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233                9996 6 +     15977 AG---T-CTT
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1044784 6 -  26018355 AA---T-TAA
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Microcebus_murinus.CM007691.1                          16508186 6 +  47401472 AA---T-TTA
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  29453 6 -     48017 GA---A-TTT
i Microgale_talazaci.MicTal_scaffold_34660              I 4 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               21151 6 -     32043 AA---T-TTA
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22817903 6 -  98408828 AA---T-AAG
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8207912 6 +  10048721 AA---T-TTC
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            32584 6 +     45743 AA---T-TTC
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        33483 6 +     34273 AA---T-TTA
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         9150 6 -    104932 AA---T-TTA
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     3591 6 +      8497 AA---T-TTA
i Mirza_zaza.k141_226143                                C 0 I 13
s Monodon_monoceros.MonMon_M_scaffold_5598                 144896 6 +    154973 AA---T-TCA
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                159662 6 +    265003 AA---T-TAA
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 3078 6 -      4346 AA---T-TTA
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  142758 6 -    168139 AA---T-TTG
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          17551 6 -    100666 AA---T-TTA
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70764415 6 +  92629107 AA---T-CTG
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75487452 6 +  98207768 AA---T-CTG
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67553624 6 +  89017189 AA---T-CTG
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74328633 6 +  97876770 AA---T-CTG
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              9174 6 +     98495 AA---T-TTA
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4422014 6 -  28371801 AA---T-TTA
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     88106 1 -    117718 ---------A
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               965872 6 +   8389877 AA---T-TTA
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5017563 6 +   6462685 aa---t-tta
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3463459 6 -   3747815 AA---T-TTA
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         8654 6 +     66751 AA---T-TTA
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Nannospalax_galili.KL201303.1                            108507 6 +    362372 AG---T-CTG
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               5863 6 +     48152 CA---T-TTA
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4482749 6 -  14209539 AA---T-TTA
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3949509 6 -   4490290 AA---T-TCA
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  47777 6 +     94413 AA---T-TTA
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1439838                            736 4 +      3718 -----T-TTA
i Nomascus_annamensis.k141_1439838                      I 2 C 0
s Nomascus_concolor.k141_49591                                959 4 +      2014 -----T-TTA
i Nomascus_concolor.k141_49591                          I 2 C 0
s Nomascus_gabriellae.k141_906566                            2287 4 -      2544 -----T-TTA
i Nomascus_gabriellae.k141_906566                       I 2 C 0
s Nomascus_siki_b.tarseq_80                             22763 4 -  18771707 -----T-TTA
i Nomascus_siki_b.tarseq_80                         I 2 I 41
s Nomascus_siki_a.k141_595747                                   512 4 +      4512 -----T-TTA
i Nomascus_siki_a.k141_595747                             I 2 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                28197 6 +   3668941 AA---T-TTA
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65565009 6 -  95554990 AA---T-TTA
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            1854 6 +      6470 AA---T-TTA
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65667379 6 +  89412551 AA---T-TTA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4994004 6 -  23139505 AA---T-TAG
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3683599 1 +  10294119 ---------a
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             677405 6 -   3126709 AA---T-TTA
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1078206 6 +   1425656 AA---T-TTA
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         35361 6 +     78940 AA---T-TTA
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  123177 6 +    145789 AA---T-CAG
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Orcinus_orca.KB316965.1                                 7223193 6 -   7562323 AA---T-TCA
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              41576 6 -     66828 AA---T-TTA
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141873700 6 + 163896628 AA---T-TAG
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      305536 6 -    505867 AA---T-TTA
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       37008 6 +     38679 AA---T-TTA
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18006450 6 -  38779656 AA---T-TTA
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134075783 6 - 275406953 AA---T-TTA
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      76997 6 +    140051 AA---T-TTA
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127572509 6 - 205426864 AA---T-TTA
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120149662 6 - 196562556 AA---T-TTA
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  32221 5 +    295523 A----T-TTG
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3635955 5 +  18214204 A----T-TTG
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5025602 5 -   6340057 A----T-TTG
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1064644 6 -   1292953 AA---T-TTA
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188153608 6 - 188283584 AA---T-TTA
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            49820 6 +     76494 AA---T-TTA
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47511005 6 +  47705337 AA---T-TTA
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 64982 6 -    104429 AA---T-TTA
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  14773 6 -     29451 AA---T-TTA
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                35176 6 +     35859 AA---T-TTA
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113520 6 -    135482 AA---T-TTG
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           3058 6 -     23713 AA---T-TTA
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            22357 6 -     27972 AA---T-TTA
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      40962 6 -     45160 AA---T-TTA
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4948108 6 -   8017169 AG---C-CAA
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    10288 6 -     36578 TA---T-TTA
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            119810 6 -    122454 AA---T-TCA
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           2866 6 -      3310 AA---T-TTA
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       22771 6 -     82327 AA---T-TTA
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           19518 6 +     19957 AA---T-TTA
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26737532 6 +  26888534 AA---T-TTA
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            95322 6 +    112873 AA---T-TTA
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             41509 6 -     61926 AA---T-TTA
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        22938 6 +     78826 AA---T-TTA
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              6889 6 -     15800 AA---T-TTA
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        10087 6 -     16101 AA---T-TTA
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          3396 6 +      9673 AA---T-TTA
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13472390 6 -  19735023 AA---T-TTA
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           11298 6 -     31692 AA---T-TTA
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           3876 6 +     21690 AA---T-TTA
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       20735 6 +     44506 AA---T-TTA
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        20945 6 +     67491 AA---T-TTA
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      11186 6 -     98129 AA---T-TTA
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     20791 6 +    147771 AA---T-TTA
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        21041 6 -     23762 AA---T-TTA
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          1507 6 -     55515 AA---T-TTA
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         20860 6 +    152463 AA---T-TTA
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      7620 6 +      8943 AA---T-TTA
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                         10580 6 +    134592 AA---T-TTA
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          21170 6 -     75465 AA---T-TTA
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              185057 6 -    373494 AA---T-TTA
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19804965 6 +  19899266 AA---T-TTA
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               3101 6 -     15069 AA---T-TTA
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              3235 6 +     14865 AA---T-TTA
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                74405 6 +     78963 AA---T-TTA
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6846442 6 +  12164890 AA---T-TTA
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    665059 6 -   2312742 NN---N-NNN
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         1585 5 +     11805 AA---T-T-A
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           40920 5 +     52369 AA---T-T-A
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         33309 5 -     44753 AA---T-T-A
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            15230 5 +     27322 AA---T-T-A
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       14871 3 -     53241 -------TTA
i Propithecus_tattersalli.k141_907138                   I 2 C 0
s Propithecus_verreauxi.k141_158021                         37140 5 -     48185 AA---T-T-A
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           31535 6 +     77221 AG---T-CTT
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            2331 6 -     27784 aa---t-tta
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        244109 6 -    344369 AA---T-TTA
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13244460 6 -  17261082 AA---T-TTA
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             602410 6 -   3946241 AA---T-TTA
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131532183 6 - 161321710 AA---T-TTG
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             27230 6 +     56732 AA---T-TTA
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6803721 6 +   6970761 AA---T-TTA
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             3114 6 +     18040 AA---T-TTA
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                14284 6 +     68503 AA---T-TTA
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13913508 6 +  90463843 AA---T-CCG
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1786274 6 +   2252614 AA---T-TTA
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           13667 6 -     14454 AA---T-TTA
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206374993 6 - 206558726 AA---T-TTA
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44853893 6 -  45163003 AA---T-TTA
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                17750 6 +    109198 AA---T-TTA
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       6089 6 +     12214 AA---T-TTA
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15670614 6 -  43202129 AA---C-TTA
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        2480 6 +     34089 AA---C-TTA
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              2421 6 -     60842 AA---C-TTA
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              2516 6 +     67014 AA---C-TTA
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              2494 6 +     60816 AA---C-TTA
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 2431 6 -     76454 AA---C-TTA
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17339181 6 -  30362882 AA---C-TTA
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         18556 6 -     62485 AA---C-TTA
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   29836 6 -    114521 AA---T-TTG
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1527475                       25655 6 +     26421 AA---T-TTA
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       6115 6 +     20762 AA---T-TTA
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         39850 6 +     40653 AA---T-TTA
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                           10407 6 -     12194 AA---T-TTA
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     23829 6 -     27512 AA---T-TTA
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         32848 6 -     33692 AA---T-TTA
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   97716 6 -    120886 AA---T-TAA
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 I 6
s Solenodon_paradoxus.SolPar_flattened_line_1012            16474 6 +    739146 AA---T-TTA
i Solenodon_paradoxus.SolPar_flattened_line_1012        I 1 C 0
s Sorex_araneus.JH798170.1                               17748690 6 -  27805282 AA---T-TAA
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2237970 6 +   2842873 AA---T-TTA
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             232866 6 -    276980 AA---T-TTA
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            25425 6 +     62062 AA---T-TTG
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189270331 6 + 218635234 AA---C-TTA
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        12786 4 -  13920577 -----T-TTA
i Symphalangus_syndactylus.tarseq_24                    I 2 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               4278 6 -      6213 AA---T-TTA
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      805201 6 +   1148477 AA---T-TTA
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  55861 6 +     99546 AA---T-TTA
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               24502 6 +     42269 AA---T-TTA
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               57818 6 +     65473 GA---T-TTA
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194005144 6 - 194193292 AA---T-TTA
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             37347 6 -     47444 TA---T-TTA
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  2080 4 +      6782 AA---T-C--
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  134340 6 -    259118 AA---T-TTA
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        24225 6 +     38948 AA---T-TTA
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   17952 6 -     32910 AA---T-TTA
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       23850 6 +     24652 AA---T-TTA
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      2728 6 -      3559 AA---T-TTA
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           40673 6 -     54611 AA---T-TTA
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       16673 6 +     17312 AA---T-TTA
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    24036 6 -     25040 AA---T-TTA
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          2697 6 +      3528 AA---T-TTA
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  49064 6 +     51589 AA---T-TTA
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       12240 6 +     14732 AA---T-TTA
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       2717 6 -     28054 AA---T-TTA
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44657512 6 -  44834318 AA---T-TTA
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        2522 6 +      3372 AA---T-TTA
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   3688 6 +     90398 AA---T-TCA
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16079785 6 +  31416278 AA---T-TTA
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2790180 2 -   3938065 aa--------
i Tupaia_chinensis.KB320831.1                           C 0 I 259
s Tupaia_tana.TupTan_flattened_line_68454                    2700 9 +     13056 ATTTAT-TTA
i Tupaia_tana.TupTan_flattened_line_68454               C 0 I 256
s Tursiops_truncatus.MRVK01000923.1                      69311910 6 -  96451834 AA---T-TCA
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 25032 6 -     25548 AA---T-TCT
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6512664 6 +  28682327 AA---T-TTA
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  3283 6 -     20643 AA---T-TTA
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             22827 6 -     33872 AA---T-TTA
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1523143 6 -   2331223 at---t-tta
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                135605 6 -    281493 AA---T-TTA
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       125069 6 -    134049 AA---T-TTA
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        212135 6 -    227762 AA---T-TTA
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     13301 6 -     20485 AA---T-TGC
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           5407 6 -      8775 AA---T-TTA
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Tamandua_tetradactyla.TamTet_scaffold_26877               13207 0 +     45698 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3531 0 -      8794 C
e Mesoplodon_bidens.MesBid_scaffold_183284                   2166 255 +      2166 T
e Echinops_telfairi.AAIY02274224.1                            507 14 +      1655 I
e Condylura_cristata.JH655880.1                          60611207 0 +  78930452 C
e Onychomys_torridus.OnyTor_scaffold_12578                  34946 0 +     62360 C
e Macaca_tonkeana.k141_2870633                               2864 158 -     27140 T
e Macaca_nigra.k141_282495                                   2859 158 -     46448 T
e Macaca_maura.k141_251854                                  43912 158 -     79256 T

a score=0.000000
s hg38.chr4_GL000008v2_random                                9773 42 +    209709 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACAT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
s Acinonyx_jubatus.LLWD01000356.1                         2031849 43 +   3721120 C-TTT-CCAA---------TCAG-----GC--------AA----------TTGAT-----GCAT-----ATA-A--A------------------ACTT----GAAA---T---TGA-G
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    110525 42 -    189883 C-CTT-ATCA---------CCAG-----GC--------AA----------CTGGT-----CTGT-----TTA-A--A------------------AT-T----GAAA---T---AGT-A
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10655184 43 +  23371972 C-TTT-CCAA---------TTAG-----CC--------AA----------TTGAT-----GCAT-----ATA-A--A------------------ACTT----GAAA---T---TGA-G
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7091906 43 -  16596857 C-TTT-CCAA---------TGAG-----GC--------AG----------TTGAT-----GCTT-----ATA-A--A------------------AGTT----GAAA---T---TGA-G
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   10851 41 -     22067 T-TTT-CCAG---------TCA------CC--------AA----------CTGAT-----ACAT-----GCA-A--A------------------AC-T----GAAG---T---AAT-A
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_3103707                  60790 42 +     61638 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACGT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        52598 42 +     53391 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACGT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         3323 42 +     72529 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACGT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          2898 42 +      3797 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACGT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             8071 42 -     18050 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----GCAT-----ATA-A--A------------------CC-T----GAAA---C---AGA-G
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  9184 42 -     11521 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----GCAT-----ATA-A--A------------------CC-T----GAAA---C---AGA-G
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              8748 42 -     21359 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----GCAT-----ATA-A--A------------------CC-T----GAAA---C---AGA-G
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_298055                                   39 42 +      1823 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----GCAT-----ATA-A--A------------------CC-T----GAAA---C---AGA-G
i Alouatta_juara.k141_298055                            C 0 C 0
s Alouatta_macconnelli.k141_1331706                          8039 42 -     10438 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----GCAT-----ATA-A--A------------------CC-T----GAAA---C---AGA-G
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            4695 42 +      7047 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----GCAT-----ATA-A--A------------------CC-T----GAAA---C---AGA-G
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             7981 42 +     10410 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----GCAT-----ATA-A--A------------------CC-T----GAAA---C---AGA-G
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            1784 42 -      4927 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----GCAT-----ATA-A--A------------------CC-T----GAAA---C---AGA-G
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             4714 42 +      6429 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----GCAT-----ATA-A--A------------------CC-T----GAAA---C---AGA-G
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3518653 16 +   4113121 C-TTT-CTAA---------TCAa-----tt--------aa-------------------------------------------------------------------------------
i Ammotragus_lervia.NIVO01013474.1                      C 0 I 7
s Anoura_caudifer.AnoCau_scaffold_422                      388786 43 -    631301 T-TTT-GTAA---------TCAG-----GA--------AA----------TCAAT-----GTAC-----ATA-A--A------------------ACTT----GAAA---T---GAA-G
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            29219 43 +     33004 C-TTT-CTAA---------TCAA-----GT--------AA----------CTGAT-----GTAT-----ATA-A--A------------------ACTT----GAAA---T---GGA-G
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 60434 42 +     78111 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----AGAT-----ATA-A--A------------------CC-T----GAAA---C---AGA-G
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            3373 42 +     22701 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACAT-----ATA-A--A------------------CC-T----GAAA---C---AGA-G
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5747330 42 +   9889416 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACAT-----ATA-A--A------------------CC-T----GAAA---C---AGA-G
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             3915 42 -    104377 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACAT-----ATA-A--A------------------CC-T----GAAA---C---AGA-G
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               3921 42 +     23246 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----AGAT-----ATA-A--A------------------CC-T----GAAA---C---AGA-G
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     1935 34 +      5067 C-TTT-CTAA---------TCAG-----GC--------AA----------TTGGT-----GCAT-----ATA-A--A------------------AC-T----G---------------
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 I 2
s Arctocebus_calabarensis.k141_1161114                      15871 42 +     17483 C-TTT-CTGA---------TCAG-----GA--------AA----------ATGAT-----GTAT-----CTA-C--A------------------AC-T----GAAA---T---ACA-G
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 7182 43 -     29036 T-TTT-GGAA---------TCAG-----GA--------CA----------TCAAT-----GTAT-----ATA-A--A------------------ACTT----GAAA---C---GAA-G
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9537165 42 +  39197703 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ATAT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             58449 42 +     85812 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ATAT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 9448 42 +     89302 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ATAT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             13953 42 -     58268 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ATAT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             61944 42 +    119057 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ATAT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               3913 42 -     25888 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ATAT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 4665 42 -     16375 C-TTT-CTAA---------TCAG-----GC--------AA----------TTGAT-----GCAT-----ATA-A--A------------------AC-T----GAAA---T---GGA-G
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                               985 42 +      2719 C-TTT-CTAA---------TCAG-----GC--------AA----------TTGAT-----GCAT-----ATA-A--A------------------AC-T----GAAA---T---GGA-G
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26378633 43 +  51448160 C-TTT-CTAA---------TCAA-----TT--------AA----------CTGAT-----GCAT-----GTA-A--A------------------ACTT----GAAA---T---GGA-G
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        3865 43 -     13118 C-TTT-CTAA---------TCAA-----TT--------AA----------CTGAT-----GCAT-----GTA-A--A------------------ACTT----GAAA---T---GGA-G
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   41715 16 -     72089 C-TTT-TTAA---------TCAA-----TT--------AA-------------------------------------------------------------------------------
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 I 12
s Bison_bison.KN264915.1                                  6557726 43 +   6870073 C-TTT-CTAA---------TCAA-----TT--------AA----------CTGAT-----GTAT-----ATA-A--A------------------ACTT----GAAA---T---GGA-G
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138137965 43 - 161108492 C-TTT-CTAA---------TCAA-----TT--------AA----------CTGAT-----GTAT-----ATA-A--A------------------ACTT----GAAA---T---GGA-G
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     570339 43 -    998990 C-TTT-CTAA---------TCAA-----TT--------AA----------CTGAT-----GTAT-----ATA-A--A------------------ACTT----GAAA---T---GGA-G
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136293698 43 - 158972876 C-TTT-CTAA---------TCAA-----TT--------AA----------CTGAT-----GTAT-----ATA-A--A------------------ACTT----GAAA---T---GGa-g
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1229454 43 -   1914593 C-TTT-CTAA---------TCAA-----TT--------AA----------CTGAT-----GTAT-----ATA-A--A------------------ACTT----GAAA---T---GGA-g
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               111806 42 -    171031 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACAT-----ATA-A--A------------------CC-T----GAAA---C---AGA-G
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 10832 42 +    125063 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACAT-----ATA-A--A------------------CC-T----GAAA---C---AGA-G
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                12880 42 -    216513 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACAT-----ATA-A--A------------------CC-T----GAAA---C---AGA-G
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        5420 42 -    134917 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACAT-----ATA-A--A------------------CC-T----GAAA---C---AGA-G
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3218040 43 -   8989139 c-ttttttaa---------tcag-----GC--------AA----------CTGAT-----GCCT-----ATA-A--A------------------ACTT----GAAA---T----GA-G
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           395745 43 -  15254737 c-ttttttaa---------tcag-----GC--------AA----------CTGAT-----GCCT-----ATA-A--A------------------ACTT----GAAA---T----GA-G
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2971478 43 +   6889770 c-ttttttaa---------tcag-----GC--------AA----------CTGAT-----GCCT-----ATA-A--A------------------ACTT----GAAA---T----GA-G
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11516564 43 +  39901454 C-TTT-CCAA---------TCAG-----GC--------AA----------TTGAT-----GCAT-----ATA-A--A------------------ACTT----GAAA---T---TGG-G
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   11582 43 +     87036 C-TTT-CCAA---------TCAG-----GC--------AA----------TTGAT-----GCAT-----ATA-A--A------------------ACTT----GAAA---T---TGG-G
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11263225 43 -  35597290 C-TTT-CCAA---------TCAG-----GC--------AA----------TTGAT-----GCAT-----ATA-A--A------------------ACTT----GAAA---T---TGG-G
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11085754 43 +  39895921 C-TTT-CCAA---------TCAG-----GC--------AA----------TTGAT-----GCAT-----ATA-A--A------------------ACTT----GAAA---T---TGG-G
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16452778 43 -  44759192 C-TTT-CCAA---------TCAG-----GC--------AA----------TTGAT-----GCAT-----ATA-A--A------------------ACTT----GAAA---T---TGG-G
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21323724 16 + 157394656 C-TTT-CTAA---------tcaa-----tt--------aa-------------------------------------------------------------------------------
i Capra_aegagrus.CM003214.1                             C 0 I 12
s Capra_hircus.CM004562.1                               135704951 16 - 157403528 C-TTT-CTAA---------tcaa-----tt--------aa-------------------------------------------------------------------------------
i Capra_hircus.CM004562.1                               C 0 I 12
s Capromys_pilorides.CapPil_scaffold_979108                    40 42 -      1248 T-TTT-CTTT---------CCAG-----GG--------AA----------CTGAT-----ACAT-----ACA-A--A------------------GC-T----GAGC---T---CAG-G
i Capromys_pilorides.CapPil_scaffold_979108             C 0 C 0
s Carlito_syrichta.NW_007248099.1                          307025 42 +    345090 t-ttt-ctaa---------tcaa-----GT--------AA----------TTGAT-----GCAT-----ATA-A--A------------------AC-G----GAAA---T---GGA-G
i Carlito_syrichta.NW_007248099.1                       C 0 I 1
s Carollia_perspicillata.CarPer_scaffold_4436               57980 43 +     67245 T-TTT-GGAA---------TCAG-----GA--------AA----------TCAAT-----GTAT-----ATA-A--A------------------ACTT----GAAA---T---GAA-G
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   28469 40 +     33760 C-TTT-CTAA---------TCAG-----GT--------GA----------TTGAT-----GCAT-----ACA-A--A------------------AC-T----TAAA---T---GA---
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   157265 47 -    276539 C-TTT-CTAA---------TCAG-----GC--------AA-T--T--A-ATTGCT-----GCAT-----TTA-A--A------------------ACTT----GAAA---T---GGA-G
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15784644 42 -  24422027 t-ttt-ctta---------ccaG-----GC--------AA----------TTGGT-----GCAT-----ATA-A--A------------------AC-T----GAAC---T---ATG-G
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15796576 42 -  24440124 T-TAT-CTTA---------CCAG-----GC--------AA----------TTGGT-----GCAT-----ATA-A--A------------------AC-T----GAAC---T---ATG-G
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       174767 42 +    436027 T-TAT-CTTA---------CCAG-----GC--------AA----------TTGGT-----GCAT-----ATA-A--A------------------AC-T----GAAC---T---ATG-G
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18888659 42 -  29618158 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACAT-----ATA-A--A------------------CC-T----GAAA---C---AGA-G
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 6203 42 -     26817 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACAT-----ATA-A--A------------------CC-T----GAAA---C---AGA-G
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                10443 42 +     25043 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACAT-----ATA-A--A------------------CC-T----GAAA---C---AGA-G
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         6061 42 +     21754 T-TTT-CTAA---------TCAA-----GT--------AA----------TTGAT-----GCAT-----ATA-A--A------------------AC-G----GAAA---T---GGA-G
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4362349 43 +   7569818 C-TTG-CTAA---------TCAG-----GC--------CA----------TTGCT-----GCAT-----ATA-A--A------------------ACTT----GAAA---G---TGa-g
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         2101 43 -      9338 C-TTG-CTAA---------TCAG-----GC--------CA----------TTGCT-----GCAT-----ATA-A--A------------------ACTT----GAAA---G---TGA-G
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6552582 42 +   6739814 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ATGT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      54059 42 -     54931 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ATGT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         19043 42 -     19697 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ATGT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         56574 42 -    107033 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ATGT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        3016 40 -      3853 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACGT-----ATA-A--A------------------CC-T----GAAA---T-----A-G
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          26952 40 +     30494 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACGT-----ATA-A--A------------------CC-T----GAAA---T-----A-G
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           2976 40 -      4022 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACGT-----ATA-A--A------------------CC-T----GAAA---T-----A-G
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          2868 42 -      3505 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACGT-----ATA-A--A------------------CC-T----GAAG---T---AGA-G
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           21658 40 +     35983 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACGT-----ATA-A--A------------------CC-T----GAAA---T-----A-G
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11988195 40 +  12117833 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACGT-----ATA-A--A------------------CC-T----GAAA---T-----A-G
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46474948 40 +  46592721 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACGT-----ATA-A--A------------------CC-T----GAAA---T-----A-G
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      32775 40 +     33420 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACGT-----ATA-A--A------------------CC-T----GAAA---T-----A-G
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        2811 40 -      3443 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACGT-----ATA-A--A------------------CC-T----GAAA---T-----A-G
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      3802 42 -      4669 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ATGT-----ATA-A--A------------------CC-T----GAAA---TAG---A-G
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        3597 40 -      4411 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACGT-----ATA-A--A------------------CC-T----GAAA---T-----A-C
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         3127 40 -      4205 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACGT-----ATA-A--A------------------CC-T----GAAA---T-----A-G
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_1070855          1336 56 -      1715 A-TTT-CTAATTTTATGAACTAGAGAATTC--------AA----------TTGAT-----GCAT-----GTT-A--A------------------AT-T----GCAA---C---AGA-T
i Chaetophractus_vellerosus.ChaVel_scaffold_1070855     C 0 C 0
s Cheirogaleus_major.k141_1157592                           56970 42 -     68416 C-TTT-CTAA---------TCAG-----GC--------AA----------TTGAT-----GCAT-----ATA-A--A------------------AC-T----GAAA---T---GGA-G
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            6012 42 +     13308 C-TTT-CTAA---------TCAG-----GC--------AA----------TTGAT-----GCAT-----ATA-A--A------------------AC-T----GAAA---T---GGA-G
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             3476 42 -     18223 C-TTT-CTAA---------TCAA-----AC--------AA----------TTGAT-----ACAT-----ATA-A--A------------------CC-A----GAAG---C---AGA-G
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             20499 42 +     25473 C-TTT-CTAA---------TCAA-----AC--------AA----------TTGAT-----ACAT-----ATA-A--A------------------CC-A----GAAG---C---AGA-G
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           39538 42 +     57117 C-TTT-CTAA---------TCAA-----AC--------AA----------TTGAT-----ACAT-----ATA-A--A------------------CC-A----GAAG---C---AGA-G
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          44213 42 +     54541 A-TTT-CTAA---------TCAA-----AC--------AA----------TTGAT-----ACAT-----ATA-A--A------------------CC-A----GAAG---C---AGA-G
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15959808 42 +  43084221 t-ttt-ctta---------ccag-----GG--------AA----------TTGAT-----ACAT-----TCA-A--A------------------AC-T----GAAT---T---AGA-G
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         69028 42 +    196370 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACAT-----ATA-A--A------------------CC-T----GAAA---C---AGA-G
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          13208 42 +     40510 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACAT-----ATA-A--A------------------CC-T----GAAA---C---AGA-G
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15136409 42 -  15256731 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACGT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      31455 42 -     53260 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACGT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101141904 42 + 101219884 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACGT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                14934 42 -     21363 G-TTT-CTAA---------TCAG-----AC--------AA----------TTGAT-----GCAC-----GTA-A--A------------------AC-T----AAAA---T---AGG-T
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           760245 42 +    964067 G-TTT-CTAA---------TCAG-----AC--------AA----------TTGAT-----GCAC-----GTA-A--A------------------AC-T----AAAA---T---AGG-T
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_141308              7027 36 -     12508 G-TTT-CTAA---------TCAA-----GA--------AG----------TTGAT-----C-TT-----GAA-C--A------------------GC-T----GAAA------------
i Chrysochloris_asiatica.ChrAsi_scaffold_141308         C 0 I 3
s Colobus_angolensis.KN985967.1                          10880483 42 +  10971483 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACGT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147661641 42 + 156195979 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACGT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            13628 42 +     23629 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACGT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         37699 42 -     40477 C-TTT-CTAA---------TCAG-----GC--------AA----------TT-AT-----GTAT-----GTA-A--A------------------ACTG----GAAA---T---TGA-G
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 275518 42 -    399297 C-CTT-ATCA---------TCCA-----GC--------AA----------CTGGT-----ACAT-----TTA-A--A------------------AT-T----TAAA---T---AGC-A
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53027051 39 +  72327488 C-CTT-ATCG------------G-----GC--------AA----------CTGGT-----GCAT-----TTA-A--A------------------AT-T----GCCA---T---AGT-A
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             18168 29 -     19186 A-TTT-CTAA---------TCAG-----GT--------AA----------TTGAT-----GCAC-----ATG-A---------------------------------------------
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 I 13
s Cryptoprocta_ferox.CryFer_flattened_line_19014            49862 43 -     70449 C-TTT-ACAA---------TCAG-----GC--------AA----------TTGGT-----GCAT-----ATA-A--A------------------ACTT----GAAA---T---TGA-G
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  206214 44 -    956709 C-TTT-CTAA---------TGAG-----GC--------AA----------TGGTT-----ACAT-----ACA-AAAA------------------AA-T----GAAC---T---AGA-G
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 28578 41 -     67205 T-T-T-CCTT---------CCAG-----GG--------AA----------TTCAT-----ACAT-----ATA-A--A------------------AC-T----GAAC---C---AGA-A
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                15415 42 +     26546 T-TTT-CCTA---------CCAG-----GC--------AA----------TTGAT-----GCAT-----ATA-A--A------------------AC-T----GAAC---C---AGA-A
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             56898 42 -    236241 T-TTT-CCTA---------CCAG-----GC--------AA----------TTGAT-----GTGT-----ATA-A--A------------------AC-T----GAAC---T---ACA-G
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          180144 36 -   6883506 A-TTT-CTAA---------CCAG-----GC--------AA----------TTGAT-----AGAT-----GTT-G--A------------------AC-A----GGA-------------
i Dasypus_novemcinctus.JH568778.1                       C 0 I 4
s Daubentonia_madagascariensis.ctg11                     16842825 42 +  31942871 C-TTT-CTAA---------TCAG-----GC--------AA----------TTGAT-----GCAT-----ATA-A--A------------------AC-T----GAAA---T---GGA-G
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80035319 43 -  96802777 C-TTT-CTAA---------TCAA-----TT--------AA----------CTGAT-----GCAT-----ATA-A--A------------------ACTT----GAAA---T---GGA-G
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18697290 43 -  18957592 t-ttt-gtaa---------tcag-----gA--------AA----------TCAAT-----GTAT-----ACA-A--A------------------ACTT----AAAA---T---GAA-G
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 320997 43 +    993696 C-TTT-CTAA---------TCAG-----GC--------CA----------TTGCT-----GCAT-----ATA-A--A------------------ACTT----GAAA---T---TGA-G
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   1648 43 +    151128 C-TTG-CTAA---------TCAG-----GC--------CA----------TTGCT-----GCAT-----ATA-A--A------------------ACTT----GAAA---G---TGA-G
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   155691 42 +    228994 C-TTT-CTTC---------CCAG-----GC--------AA----------TTGAT-----GCAT-----ACA-A--A------------------AC-T----GAAC---T---AGA-G
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3653425 53 +   4240102 C-TTT-CTAG---------TCAT-----GC--------AA----------TTGat-----gcatagtatata-t--a------------tatatctc-t----gaAA---T---GGA-G
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 24977 65 +     28912 C-TTT-CTAG---------TCAT-----GC--------AA----------TTGAT-----GCATAGTATATA-T--ATATATATATATATATATATA-T----GAAA---T---GGA-G
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                34159 42 -     73477 T-TTT-CCTA---------CCAG-----GC--------AA----------CTGAT-----GCAT-----ATA-A--A------------------AC-T----GAAC---T---ACA-G
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22993074  2 -  44670279 --------------------------------------------------------------------------------------------------------------------N-N
i Echinops_telfairi.JH980316.1                          I 1367 C 0
s Eidolon_helvum.KE772537.1                                 10665 45 +     24177 C-TTT-CTAA---------TTAG-----GC--------AA----------TTGAT-----GTat-----ata-a--a------------------actg----gaaa---tga-aga-g
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1489982 43 +   1727528 C-TTT-CTAA---------TCAA-----TT--------AA----------CTGAT-----GTAT-----ACA-A--A------------------ACTT----GAAA---T---GGA-G
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7804730 36 +  15467074 G-TTT-CTAA---------TTAG-----AAA-------AA----------TTGAT-----TTGT-----GTA-A--A------------------AC-T----GA--------------
i Elephantulus_edwardii.JH947210.1                      C 0 I 3
s Ellobius_lutescens.LOEQ01003611.1                        237709 39 -    369425 T-CTT-ATCA------------G-----AC--------AA----------CTGGT-----GTAT-----TTA-A--A------------------AT-T----GAAA---C---AGT-A
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           4722 39 -      7838 T-CTT-ATCA------------G-----AC--------AA----------CTGGT-----GTAT-----TTA-A--A------------------AT-T----GAAA---C---AGT-A
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85869638 43 +  99434291 C-TTT-CCAA---------TAAG-----AC--------AG----------TTGAT-----GCAT-----ACA-A--A------------------ACTT----GAAA---C---TGA-G
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4702249 29 +   6522550 T-TTC-CCAA---------TCAA-----GA--------AA----------TTGAG-----GTAT-----ATA-A---------------------------------------------
i Eptesicus_fuscus.JH977687.1                           C 0 I 8
s Equus_asinus.JREZ01000062.1                             5851419 43 -   7175178 C-TTT-CTAA---------TCAG-----GT--------CA----------TTACT-----GCAT-----ATA-A--A------------------ACTT----GAAA---T---TGA-G
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13349922 43 +  41866177 C-TTT-CTAA---------TCAG-----GC--------CA----------TTACT-----GCAT-----ATA-A--A------------------ACTT----GAAA---T---TGA-G
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          11412 43 +     92910 C-TTT-CTAA---------TCAG-----GC--------CA----------TTACT-----GCAT-----ATA-A--A------------------ACTT----GAAA---T---TGA-G
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11530947 40 +  16010500 C-TGT-ATAA---------GCA-------C--------AT----------GTGAC-----atat-----ata-g--a------------------attt----aaaa---t----aa-a
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48768587 42 -  48907691 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACGT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          313520 43 +    330699 C-TTT-CTAA---------TCAA-----TT--------AA----------CTGAT-----GCAT-----GTA-A--A------------------ACTT----GAAA---T---GGA-G
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             59951 43 +     89355 C-TTT-CTAA---------TCAA-----TT--------AA----------CTGAT-----GCAT-----GTA-A--A------------------ACTT----GAAA---T---GGA-G
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              3016 42 +     13586 C-TTT-CTAA---------TCAG-----GC--------AA----------TTGAT-----GCAT-----ATA-A--A------------------AC-T----GAAA---T---GGA-G
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               2951 42 -      6809 C-TTT-CTAA---------TCAG-----GC--------AA----------TTGAT-----GCAT-----ATA-A--A------------------AC-T----GAAA---T---GGA-G
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             9426 42 +     36558 C-TTT-CTAA---------TCAG-----GC--------AA----------TTGAT-----GCAT-----ATA-A--A------------------AC-T----GAAA---T---GGA-G
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             5741 42 +     60246 C-TTT-CTAA---------TCAG-----GC--------AA----------TTGAT-----GCAT-----ATA-A--A------------------AC-T----GAAA---T---GGA-G
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 9224 42 +    109717 C-TTT-CTAA---------TCAG-----GC--------AA----------TTGAT-----GCAT-----ATA-A--A------------------AC-T----GAAA---T---GGA-G
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               13603 42 +     16540 C-TTT-CTAA---------TCAG-----GC--------AA----------TTGAT-----GCAT-----ATA-A--A------------------AC-T----GAAA---T---GGA-G
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                13879 42 +     27497 C-TTT-CTAA---------TCAG-----GC--------AA----------TTGAT-----GCAT-----ATA-A--A------------------AC-T----GAAA---T---GGA-G
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           16345 42 +     26808 C-TTT-CTAA---------TCAG-----GC--------AA----------TTGAT-----GCAT-----ATA-A--A------------------AC-T----GAAA---T---GGA-G
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                31069 42 +     46535 C-TTT-CTAA---------TCAG-----GC--------AA----------TTGAT-----GCAT-----ATA-A--A------------------AC-T----GAAA---T---GGA-G
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              13792 42 -     29447 C-TTT-CTAA---------TCAG-----GC--------AA----------TTGAT-----GCAT-----ATA-A--A------------------AC-T----GAAA---T---GGA-G
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129890825 43 - 159252932 C-TTT-CCAA---------CCAG-----GC--------AA----------TTGAT-----GCAT-----ATA-A--A------------------ACTT----GAAA---T---TGA-G
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129277896 43 - 158578461 C-TTT-CCAA---------CCAG-----GC--------AA----------TTGAT-----GCAT-----ATA-A--A------------------ACTT----GAAA---T---TGA-G
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 19035 43 +     52776 C-TTT-CCAA---------CCAG-----GC--------AA----------TTGAT-----GCAT-----ATA-A--A------------------ACTT----GAAA---T---TGA-G
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13890755 42 -  19261668 t-ttt-cata---------ccaG-----GC--------AA----------TTGAT-----GCAT-----ACA-A--A------------------AC-T----GAAC---G---AGA-G
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     208926 42 -    847004 C-TTT-CTGA---------TCTG-----GC--------AA----------ATGAT-----GTCT-----ATA-C--A------------------AC-T----GACA---T---GCA-G
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           11307 42 -     43889 C-TTT-CTGA---------TCTG-----GC--------AA----------ATGAT-----GTCT-----ATA-C--A------------------AC-T----GACA---T---GCA-G
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           8371 42 +     27357 C-TTT-CTGA---------TCAG-----GC--------AA----------ATGAT-----GTCT-----ATA-C--A------------------AC-T----GAAA---T---GCA-G
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               154289 41 +    324696 T-TTT-CTAA---------TCAG-----GC--------AA----------T-GAT-----GCAT-----TTA-A--A------------------AC-T----GAAA---T---AGA-G
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    179497 43 -    189561 C-TTT-CTTA---------TCAG-----TT--------AA----------CTGAT-----GTAT-----ATA-A--A------------------ACTT----GAAA---T---GGa-g
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           10696 42 -     18683 C-TTT-CTAA---------TCAG-----GC--------AA----------TTGAT-----GCAT-----ATA-A--A------------------AC-T----AAAA---T---GGA-A
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               3171 42 -     14630 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACAT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119650270 42 - 195582420 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACAT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   75227 42 +    118900 C-TTT-CTAA---------TCAG-----GC--------AA----------TTGAT-----GCAT-----ATA-A--A------------------AA-T----AAAA---T---GGA-A
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 I 216
s Hapalemur_alaotrensis.k141_1198205                         3576 42 +      3980 C-TTT-CTAA---------TCAG-----GC--------AA----------TTGAT-----GCAT-----ATA-A--A------------------AC-C----GAAA---T---GGA-G
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             26052 42 +     26611 C-TTT-CTAA---------TCAG-----GC--------AA----------TTGAT-----GCAT-----ATA-A--A------------------AC-T----GAAA---T---GGA-G
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             3512 42 +     56096 C-TTT-CTAA---------TCAG-----GC--------AA----------TTGAT-----GCAT-----ATA-A--A------------------AC-T----GAAA---T---GGA-G
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        26789 42 -     42470 C-TTT-CTAA---------TCAG-----GC--------AA----------TTGAT-----GCAT-----ATA-A--A------------------AC-T----GAAA---T---GGA-G
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        43383 42 -     54384 C-TTT-CTAA---------TCAG-----GC--------AA----------TTGAT-----GCAT-----ATA-A--A------------------AC-T----GAAA---T---GGA-G
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              15071 43 +     53719 C-TTT-CCAA---------TCAG-----GC--------AA----------TTGGT-----GCAT-----ATA-A--A------------------ACTT----GAAA---T---TGA-G
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                25996 16 -     91191 C-TTT-CTAA---------TCAA-----TT--------AA-------------------------------------------------------------------------------
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 I 12
s Heterocephalus_glaber.JH602058.1                        2549141 42 +  31725842 t-ttt-cata---------ccaG-----CC--------AA----------TTAAT-----GCAT-----ACA-A--A------------------AC-T----GAAC---T---AGA-G
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               54558 28 +     73687 --------------------------------------GA----------TTGAT-----CCTT-----GTA-A--A------------------AC-T----GAAA---T---AGA-G
i Heterohyrax_brucei.HetBruBak_scaffold_25354           I 11 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              145560 35 +    277961 C-TTT-CTAA---------TCAA-----TT--------AA----------CTGAT-----GCAT-----ATA-A--A------------------ACTT----G---------------
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      276902 43 -    477199 C-TTT-CTAA---------TCAG-----GC--------AA----------TTGAT-----gtat-----ata-a--a------------------actg----gaaa---t---tga-G
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              6060 43 -      9143 C-TTT-CTAA---------TCAG-----GC--------AA----------TTGAT-----GTAT-----ATA-A--A------------------ACTG----GAAA---T---TGA-G
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      2433 41 -   7690867 C-TTT-CTAA---------TTAA-----GC--------AA----------TTGAT-----ACAT-----ATA-A--A------------------CC-T----GAAA---T----GA-G
i Hoolock_leuconedys.ctg79                                 C 0 I 30
s Hyaena_hyaena.HyaHya_flattened_line_20729                 14127 42 -     67322 C-TTC-CCAA---------TCAG-----GC--------AA-----------TGGT-----GCAT-----ATA-A--A------------------ACTT----GAAA---T---TGA-G
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           17060 42 -    119109 T-TTT-CCTA---------CCAG-----GA--------AA----------TTGAT-----GCAT-----ATA-A--A------------------AC-T----GAAC---T---ACA-G
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              2992 41 +      5897 C-TTT-CTAA---------TTAA-----GC--------AA----------TTGAT-----ACAT-----ATA-A--A------------------CC-T----GAAA---T----GA-G
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_1485652                              1413 41 -      1697 C-TTT-CTAA---------TTAA-----GC--------AA----------TTGAT-----ACAT-----ATA-A--A------------------CC-T----GAAA---T----GA-G
i Hylobates_agilis.k141_1485652                         C 0 C 0
s Hylobates_klossii.k141_466549                              9437 41 +     11537 C-TTT-CTAA---------TTAA-----GC--------AA----------TTGAT-----ACAT-----ATA-A--A------------------CC-T----GAAA---T----GA-G
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14622538 41 -  25970782 C-TTT-CTAA---------TTAA-----GC--------AA----------TTGAT-----ACAT-----ATA-A--A------------------CC-T----GAAA---T----GA-G
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1133650                            2427 41 -      2775 C-TTT-CTAA---------TTAA-----GC--------AA----------TTGAT-----ACAT-----ATA-A--A------------------CC-T----GAAA---T----GA-G
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             31925 41 -     60944 C-TTT-CTAA---------TTAA-----GC--------AA----------TTGAT-----ACAT-----ATA-A--A------------------CC-T----GAAA---T----GA-G
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     4188 42 +     22540 T-TTT-CTAA---------TCAG-----GT--------AA----------TTGAT-----CCAT-----ATA-A--A------------------AC-C----AAAC---T---AGA-G
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7124060 42 +  13083262 t-ttc-ctaa---------tcAG-----GC--------AA----------TTGAT-----GCAT-----ATA-A--A------------------AC-T----GAAA---T---AGA-G
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_1884019                                   1256 42 -      2196 C-TTT-CTAA---------TCAG-----GC--------AA----------CTGAT-----GCAT-----AGA-A--A------------------AC-T----GAAA---T---GGA-G
i Indri_indri.k141_1884019                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               7307 43 +     17520 C-TTT-CTAA---------TCAA-----TT--------AA----------CTGAT-----GCAT-----ATA-A--A------------------ACTT----GAAA---T---GGA-G
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8563591 41 +  11848649 t-ttt-ccag---------tCA------TC--------AA----------CTGGT-----ATAT-----GCA-A--A------------------AC-T----GAAG---T---AGT-A
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               22132 43 +     37189 C-TTT-CTAA---------TCAA-----TT--------AA----------CTGAT-----GCAT-----ATA-A--A------------------ACTT----GAAA---T---GGA-G
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          48034 42 -    147782 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACAT-----ATA-A--A------------------CC-T----GAAA---C---AGA-G
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   112043 29 -    115756 T-TTT-CCAA---------TCAA-----GA--------AA----------TTGAG-----ATAT-----ATA-A---------------------------------------------
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 I 8
s Lemur_catta.scaffold_1                                258405072 42 - 285822530 C-TTT-CTAA---------TCAG-----GC--------AA----------TTGAT-----GCAT-----ATA-A--A------------------AC-T----GAAA---T---GGA-G
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        21942 42 +     39228 C-TTT-CTAA---------TCAG-----GC--------AA----------TTGAT-----GCAT-----ATA-A--A------------------AC-T----GAAA---T---GGA-G
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            51317 42 +     63517 C-TTT-CTAA---------TCAG-----GC--------AA----------TTGAT-----GCAT-----ATA-A--A------------------AC-T----GAAA---T---GGA-G
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        76560 42 +    116806 C-TTT-CTAA---------TCAG-----GC--------AA----------TTGAT-----GCAT-----ATA-A--A------------------AC-T----GAAA---T---GGA-G
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     29581 42 -     33031 C-TTT-CTAA---------TCAG-----GC--------AA----------TTGAT-----GCAT-----ATA-A--A------------------AC-T----GAAA---T---GGA-G
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3083850 43 -   3498232 C-TTT-CCAA---------TCAG-----GC--------AA----------TTGAT-----GCAT-----ATA-A--A------------------ACTT----GAAA---T---TGA-G
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    11047 42 +     22452 C-TTT-CTAA---------TCAG-----AC--------AA----------CTGAT-----GCAT-----GTA-A--A------------------AC-T----GAAA---T---AGA-G
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            134467 43 +   3060487 C-TTT-CTAA---------TCAA-----TT--------AA----------CTGAT-----GCAT-----ATA-A--A------------------ACTT----GAAA---T---GGA-G
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19245670 42 +  19376315 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACGT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            8671 42 +     84689 A-TTT-CTGA---------TCAG-----GC--------AA----------ATGAT-----GTAC-----ATA-C--A------------------AC-T----GAAA---T---GGA-G
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3776422 42 +   6799190 A-TTT-CTGA---------TCAG-----GC--------AA----------ATGAT-----GTAC-----ATA-C--A------------------AC-T----GAAA---T---GGA-G
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20589331 52 -  62548349 G-TTG-CTAA---------TCAG-----GA--------AACTGGTCCATGTTGAT-----CCAT-----GTA-A--A------------------AC-T----GAAA---T---ACA-G
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11085210 43 +  39895028 C-TTT-CCAA---------TCAG-----GC--------AA----------TTGAT-----GCAT-----ATA-A--A------------------ACTT----GAAA---T---TGG-G
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             17356 42 +     74745 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACGT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12703862 42 +  12821369 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACGT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               5958 42 +      6569 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACGT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           44260 42 +     63263 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACGT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_925451                                  268 42 +     10231 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACGT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Macaca_fuscata.k119_925451                            C 0 C 0
s Macaca_leonina.k141_3421209                                2409 42 +      3017 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ATGT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_mulatta.NC_041755.1                            196032939 42 + 196197964 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACGT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11443045 42 +  11645122 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ATGT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_radiata.k141_1580474                                2799 42 -      3617 G-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACGT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Macaca_radiata.k141_1580474                           C 0 I 2
s Macaca_siberu.k141_741907                                 13131 42 -     55006 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ATGT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43838168 42 +  43892939 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACGT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                5390 42 -      5978 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACGT-----ACA-A--A------------------CC-T----GAAA---T---AGA-G
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                700083 43 +    802869 C-TTT-CTAA---------TTAG-----GC--------AA----------TTGAT-----GTAT-----ATA-A--A------------------ACTG----GAAA---C---AGA-G
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43434830 42 -  43563597 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACAT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4447656 42 -   4543643 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACAT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            144574 43 +    252755 G-TTT-CT-A---------TCAG-----Ac--------aa----------ctgat-----atat-----atata--a------------------actt----gaaA---T---TGA-G
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             34646 45 +     58827 G-TTT-CT-A---------TCAG-----ac--------aa----------ctgat-----atata-t--atata--a------------------actt----gaaA---T---TAA-G
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36871895 42 +  64221397 C-TTC-CTAA---------TCAG-----GC--------AA----------TTGAT-----GCAT-----ATA-A--A------------------AC-T----GAAA---T---AGA-G
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       62742 43 -    234502 C-TTT-CTAA---------TCAG-----GC--------AA----------TTGAT-----GTAT-----GTA-A--A------------------ATTG----GAAA---T---TGA-G
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_146202             448 43 -      1999 C-TTT-CCAA---------TAAG-----AT--------AG----------TTGAT-----GCAT-----ATA-A--A------------------ACTT----GAAA---T---TGA-G
i Mellivora_capensis.MelCap_flattened_line_146202       C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               10002 42 +     15977 C-CTT-ATTA---------TCAG-----GC--------AA----------CTTGC-----ACCT-----TTA-A--A------------------AT-T----GAAA---T---AGT-A
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1044790 39 -  26018355 C-CTT-ATCA------------G-----GC--------AA----------CTGGt-----gcat-----tta-a--a------------------at-t----gaaa---t---agt-a
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Microcebus_murinus.CM007691.1                          16508192 42 +  47401472 C-TTT-CTAA---------TCAG-----GC--------AA----------TTGAT-----GCAT-----ATA-A--A------------------AC-T----GAAA---T---GGA-G
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  29459 42 -     48017 G-TTT-CTAA---------TCAG-----TA--------AA----------TGCAT-----CCAT-----GGA-A--A------------------GG-T----GCAA---T---AGA-G
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               21157 43 -     32043 T-GTT-GTAA---------TCAT-----GA--------AA----------TTAAT-----GTAT-----ATA-A--A------------------ACTT----GAAA---T---GAA-G
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22817909 39 -  98408828 T-CTT-ATCA------------G-----AC--------AA----------CTGGt-----gtat-----tta-a--a------------------at-t----gaaa---t---agt-a
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8207918 38 +  10048721 T-TTT-CTAA---------TCAG-----GC--------AA----------TTGAT-----GTGT-----ATA-A--A------------------ACCT----GAAG------------
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            32590 38 +     45743 T-TTT-CTAA---------TCAG-----GC--------AA----------TTGAT-----GTGT-----ATA-A--A------------------ACCT----GAAG------------
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        33489 42 +     34273 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACGT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         9156 43 -    104932 C-TTT-CCAA---------TCAG-----GC--------AA----------TTGAT-----GCAT-----ATA-A--A------------------ACTT----GAAA---T---TGA-G
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     3610 25 +      8497 ---------------------------------------------------TCAT-----GCTC-----ATA-A--A------------------AC-T----GAAA---T---GGA-G
i Mirza_zaza.k141_226143                                I 13 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 144902 43 +    154973 C-TTT-CTAA---------TCAA-----TT--------AA----------CTGAT-----GCAT-----ATA-A--A------------------ACTT----GAAA---T---GGA-G
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                159668 43 +    265003 T-TTT-GTAA---------TCAG-----GC--------AA----------TCGAT-----GTAC-----ATA-A--A------------------ACTT----GAAA---T---GAA-C
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 3084 43 -      4346 C-TTT-CTAA---------TCAA-----TT--------AA----------CTGAT-----GTAT-----ATA-A--A------------------ACTT----GAAA---T---GGA-G
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  142764 43 -    168139 C-TTT-CCAA---------TCAG-----GC--------AA----------TTGGT-----GCAT-----ATA-A--A------------------ACTT----GAAA---T---TGA-G
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          17557 29 -    100666 T-CTC-CTAA---------TCAG-----GA--------AT----------TTGAT-----GTAT-----ATA-A---------------------------------------------
i Murina_feae.MurFea_scaffold_2254                      C 0 I 6
s Mus_caroli.LT608236.1                                  70764421 42 +  92629107 C-CTT-ATCA---------TCAG-----GC--------AA----------CTGGT-----gcat-----tta-a--a------------------at-t----gaaa---t---aat-a
i Mus_caroli.LT608236.1                                 C 0 I 5
s Mus_musculus.chr16                                     75487458 42 +  98207768 C-CTT-ATCA---------TCAG-----GC--------AA----------CTGGT-----ACgt-----tta-a--a------------------at-t----gaaa---t---aat-a
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67553630 42 +  89017189 C-CTT-ATCA---------TCAG-----GC--------AA----------CTGGT-----GCAT-----TTA-A--A------------------AT-T----GAAg---t---aat-a
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74328639 43 +  97876770 C-CTT-ATCA---------TCAG-----GC--------AA----------CCAGT-----Gcgt-----tta-a--a------------------tttt----caaa---t---aat-a
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              9180 42 +     98495 C-TTT-CTAA---------TCAG-----AC--------AA----------TCGAT-----GCAT-----ATA-A--A------------------AC-G----GAAA---T---GGA-A
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4422020 43 -  28371801 C-TTT-CCAA---------TAAG-----AG--------AG----------TTGAT-----GCAT-----ATA-A--A------------------ACTT----GAAA---T---TGA-G
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     88107 42 -    117718 T-CTG-CTTT---------CCAG-----GG--------AA----------TTGAT-----ACAT-----ATA-A--A------------------AC-T----GAGC---T---AAG-G
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               965878 29 +   8389877 T-TTC-CTAA---------TCAG-----GA--------AA----------TTAAT-----GTAT-----AGA-A---------------------------------------------
i Myotis_brandtii.KE161952.1                            C 0 I 8
s Myotis_davidii.KB114863.1                               5017569 29 +   6462685 t-ttt-ctaa---------tcag-----GA--------AA----------TTGAT-----GTAT-----ATA-A---------------------------------------------
i Myotis_davidii.KB114863.1                             C 0 I 8
s Myotis_lucifugus.GL429887.1                             3463465 29 -   3747815 T-TTC-CTAA---------TCAG-----GA--------AA----------TTGAT-----GTAT-----AGA-A---------------------------------------------
i Myotis_lucifugus.GL429887.1                           C 0 I 8
s Myotis_myotis.MyoMyo_scaffold_6123                         8660 29 +     66751 T-TTT-CTAA---------TCAG-----GA--------AA----------TTGAT-----GTAT-----ATA-A---------------------------------------------
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 I 8
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3531 38 -      8794 ------CTAA---------TCAG-----GC--------AA----------TTGAT-----GCAT-----GTA-A--A------------------AC-T----AAAA---T---AGG-T
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            108513 45 +    362372 C-TTT-CTCA---------TCAG-----CC--------AA----------ATGAT-----GAGA-----ATA-A--A------------------AC-C----GCAGTAGT---AGT-A
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               5869 40 +     48152 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAG-----ACGT-----ATA-A--C------------------CC-T----GAAA---T-----A-G
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4482755 43 -  14209539 C-TTT-CCAA---------TCAG-----GC--------AA----------TTGAT-----GCAT-----ATA-A--A------------------ACTT----GAAA---T---TGA-G
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3949515 43 -   4490290 C-TTT-CTAA---------TCAA-----TT--------AA----------CTGAT-----GCAT-----ATA-A--A------------------ACTT----GAAA---T---GGA-G
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  47783 43 +     94413 T-TTT-GTAA---------TCAG-----GC--------AA----------TTGAT-----GTAT-----ATA-A--A------------------ACAT----AAAA---T---GAA-G
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1439838                            740 41 +      3718 C-TTT-CTAA---------TTAA-----GC--------AA----------TTGAT-----ACAT-----ATA-A--A------------------CC-T----GAAA---T----GA-G
i Nomascus_annamensis.k141_1439838                      C 0 C 0
s Nomascus_concolor.k141_49591                                963 41 +      2014 C-TTT-CTAA---------TTAA-----GC--------AA----------TTGAT-----ACAT-----ATA-A--A------------------CC-T----GAAA---T----GA-G
i Nomascus_concolor.k141_49591                          C 0 C 0
s Nomascus_gabriellae.k141_906566                            2291 41 -      2544 C-TTT-CTAA---------TTAA-----GC--------AA----------TTGAT-----ACAT-----ATA-A--A------------------CC-T----GAAA---T----GA-G
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_1445                            7938 42 -      7983 CTTTT-CTAA---------TTAA-----GC--------AA----------TTGAT-----ACAT-----ATA-A--A------------------CC-T----GAAA---T----GA-G
i Nomascus_siki_b.tarseq_1445                       I 7656 n 41
s Nomascus_siki_a.k141_595747                                   516 41 +      4512 C-TTT-CTAA---------TTAA-----GC--------AA----------TTGAT-----ACAT-----ATA-A--A------------------CC-T----GAAA---T----GA-G
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                28203 43 +   3668941 C-TTT-CCAA---------GCAG-----GC--------AA----------TTGAT-----GCAT-----ATA-A--A------------------ACTT----GAAA---T---TGG-G
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65565015 42 -  95554990 C-TTT-CTTA---------TCCG-----GC--------AA----------ATGAT-----GTAT-----ATA-C--A------------------AC-T----GAAA---T---GGA-G
i Nycticebus_bengalensis.LG16                           C 0 I 34
s Nycticebus_coucang.k141_2051882                            1860 42 +      6470 C-TTT-CTTA---------TCCG-----GC--------AA----------ATGAT-----GTAT-----ATA-C--A------------------AC-T----GAAA---T---GGA-G
i Nycticebus_coucang.k141_2051882                       C 0 I 262
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65667385 42 +  89412551 C-TTT-CTTA---------TCAG-----GC--------AA----------ATGAT-----GTAT-----ATA-C--A------------------AC-T----GAAA---T---GGA-G
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 I 34
s Ochotona_princeps.JH802095.1                            4994010 41 -  23139505 C-TTT-CTAA---------TCAA-----AC--------AA----------TTGAT-----Ccat-----aca-a--a------------------at-tttttaaaa------------
i Ochotona_princeps.JH802095.1                          C 0 I 2
s Octodon_degus.JH651621.1                                3683600 41 +  10294119 t-t-t-attt---------ccag-----gg--------AA----------TTGAT-----ACAC-----ATA-A--A------------------AC-T----GAAC---T---AGA-G
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             677411 34 -   3126709 C-TTT-CCAA---------TCAG-----GC--------AA----------TTGAT-----GCAT-----ATA-A--A------------------ACTT--------------------
i Odobenus_rosmarus.KB229369.1                          C 0 I 8
s Odocoileus_virginianus.KZ101650.1                       1078212 43 +   1425656 C-TTT-CTAA---------TCAA-----TT--------AA----------CTGAT-----GTAT-----ACA-A--A------------------ACTT----GAAA---T---GGA-G
i Odocoileus_virginianus.KZ101650.1                     C 0 I 9
s Okapia_johnstoni.LVCL01S0017931.1                         35367 43 +     78940 C-TTT-CTAA---------TCAA-----TT--------AA----------CTGAT-----GTAT-----ATA-A--A------------------ACTT----GAAA---T---GGa-g
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  123183 39 +    145789 T-CTT-ATCA------------G-----AC--------AA----------CTGGC-----GAAT-----TTA-A--A------------------AT-T----GAAA---T---AGT-A
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  34946 31 +     62360 ----------------------G-----GC--------AA----------CTGGT-----GCAT-----TTA-A--A------------------AT-T----GAAA---T---AGT-A
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7223199 43 -   7562323 C-TTT-CTAA---------TCAA-----TT--------AA----------CTGAT-----GCAT-----ATA-A--A------------------ACTT----GAAA---T---GGA-G
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              41582 42 -     66828 G-TTT-CTTG---------TCAG-----GA--------AA----------TTAAA-----CCAT-----GTA-A--A------------------AT-T----GAAA---T---AGA-G
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141873706 42 + 163896628 C-TTT-CTAA---------TCAG-----GC--------AA----------CTGAT-----GCAT-----GTA-A--A------------------AC-T----GAAA---T---AGG-G
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      305542 43 -    505867 C-TTT-CCAA---------GCAG-----GC--------AA----------TTGAT-----GCAT-----ATA-A--A------------------ACTT----GAAA---T---TGG-G
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       37014 42 +     38679 C-TTT-CTGA---------TCAG-----GC--------AA----------ATGAT-----GTCT-----ATA-C--A------------------AC-T----GAAA---T---GCA-G
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18006456 42 -  38779656 C-TTT-CTGA---------TCAG-----GC--------AA----------ATGAT-----GTCT-----ATA-C--A------------------AC-T----GAAA---T---GCA-G
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134075789 16 - 275406953 C-TTT-CTAA---------tcaa-----tt--------aa-------------------------------------------------------------------------------
i Ovis_aries.CM001582.2                                 C 0 I 12
s Ovis_canadensis.OviCan_scaffold_6251                      77003 16 +    140051 C-TTT-CTAA---------TCAA-----TT--------AA-------------------------------------------------------------------------------
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 I 12
s Pan_paniscus.CM003386.1                               127572515 42 - 205426864 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACAT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120149668 42 - 196562556 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACAT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Pan_troglodytes.CM009241.2                            C 0 I 16
s Panthera_onca.PanOnc_flattened_line_1615                  32226 43 +    295523 C-TTT-CCAA---------TCAG-----GC--------AA----------TTGGT-----GCAT-----ATA-A--A------------------ACTT----GAAA---T---TGA-G
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3635960 43 +  18214204 C-TTT-CCAA---------TCAG-----GC--------AA----------TTGGT-----GCAT-----ATA-A--A------------------ACTT----GAAA---T---TGA-G
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5025607 43 -   6340057 C-TTT-CCAA---------TCAG-----GC--------AA----------TTGGT-----GCAT-----ATA-A--A------------------ACTT----GAAA---T---TGA-G
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1064650 16 -   1292953 C-TTT-CTAA---------tcaa-----tt--------aa-------------------------------------------------------------------------------
i Pantholops_hodgsonii.KE114631.1                       C 0 I 12
s Papio_anubis.CM001492.2                               188153614 42 - 188283584 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACGT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            49826 42 +     76494 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACGT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47511011 42 +  47705337 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACGT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 64988 42 -    104429 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACGT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  14779 42 -     29451 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACGT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                35182 42 +     35859 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACGT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113526 43 -    135482 C-TTT-CCAA---------TCAG-----GA--------AA----------CTGAT-----GCAT-----ATA-A--A------------------ACTT----GAAA---T---TGA-G
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           3064 42 -     23713 C-TTT-CTGA---------TCAG-----GC--------AA----------ATGAT-----GTAT-----CTA-C--A------------------AC-T----GAAA---T---ACA-G
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            22363 42 -     27972 C-TTT-CTGA---------TCAG-----GC--------AA----------ATGAT-----GTAT-----CTA-C--A------------------AC-T----GAAA---T---ACA-G
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      40968 55 -     45160 C-CTC-CTAG---------TCAG-----GCAGCCAGACAA----------TTGAT-----GCATAGTATATA-A--A------------------TC-T----GAAA---T---GGA-A
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4948114 39 -   8017169 C-CTT-ATCA------------G-----GC--------AA----------CTGGT-----gcat-----tta-a--a------------------at-t----gaaa---t---agt-A
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    10294 41 -     36578 T-TTT-CCTA---------CCAG-----GC--------AA----------TTGAT-----GTGT-----ACA-A--A------------------AC-A----GAAC---T---AGA--
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            119816 43 -    122454 C-TTT-CTAA---------TCAA-----TT--------AA----------CTGAT-----GCAT-----ATA-A--A------------------ACTT----GAAA---T---GGA-G
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           2872 42 -      3310 A-TTT-CTAA---------TCAA-----GC--------AA----------TCGAT-----ATGT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       22777 42 -     82327 C-TTT-CTAA---------TCAA-----GC--------AA----------TCGAT-----ACGT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           19524 42 +     19957 C-TTT-CTAA---------TCAA-----GC--------AA----------TCGAT-----ACGT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26737538 42 +  26888534 C-TTT-CTAA---------TCAA-----GC--------AA----------TCGAT-----ACGT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            95328 29 +    112873 T-CTC-CTAA---------TCAG-----GA--------AA----------TTGAG-----ATAT-----ATA-A---------------------------------------------
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 I 8
s Pithecia_albicans.k141_991845                             41515 42 -     61926 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACAT-----ATA-A--A------------------CC-T----GCAA---C---AGA-G
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        22944 42 +     78826 C-TTT-CTAA---------TCAA-----GC--------AA----------TGGAT-----ACAT-----ATA-A--A------------------CC-T----GCAA---C---AGA-G
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              6895 42 -     15800 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACAT-----ATA-A--A------------------CC-T----GCAA---C---AGA-G
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        10093 42 -     16101 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACAT-----ATA-A--A------------------CC-T----GCAA---C---AGA-G
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          3402 42 +      9673 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACAT-----ATA-A--A------------------CC-T----GCAA---C---AGA-G
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13472396 42 -  19735023 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACAT-----ATA-A--A------------------CC-T----GCAA---C---AGA-G
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           11304 42 -     31692 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACAT-----ATA-A--A------------------CC-T----GCAA---C---AGA-G
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           3882 43 +     21690 C-TTT-CCAA---------TCAA-----TT--------AA----------CTGAT-----GCAT-----ATA-A--A------------------ACTT----GAAA---T---GGA-G
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       20741 42 +     44506 C-TTT-CTAA---------TCAA-----AC--------AA----------TTGAT-----ACAT-----ATA-A--A------------------CC-A----GAAG---C---AGA-G
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        20951 42 +     67491 C-TTT-CTAA---------TCAA-----AC--------AA----------TTGAT-----ACAT-----ATA-A--A------------------CC-A----GAAG---C---AGA-G
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      11192 42 -     98129 C-TTT-CTAA---------TCAA-----AC--------AA----------TTGAT-----ACAT-----ATA-A--A------------------CC-A----GAAG---C---AGA-G
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     20797 42 +    147771 C-TTT-CTAA---------TCAA-----AC--------AA----------TTGAT-----ACAT-----ATA-A--A------------------CC-A----GAAG---C---AGA-G
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        21047 42 -     23762 C-TTT-CTAA---------TCAA-----AC--------AA----------TTGAT-----ACAT-----ATA-A--A------------------CC-A----GAAG---C---AGA-G
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          1513 42 -     55515 C-TTT-CTAA---------TCAA-----AC--------AA----------TTGAT-----ACAT-----ATA-A--A------------------CC-A----GAAG---C---AGA-G
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         20866 42 +    152463 C-TTT-CTAA---------TCAA-----AC--------AA----------TTGAT-----ACAT-----ATA-A--A------------------CC-A----GAAG---C---AGA-G
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      7626 42 +      8943 C-TTT-CTAA---------TCAA-----AC--------AA----------TTGAT-----ACAT-----ATA-A--A------------------CC-A----GAAG---C---AGA-G
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                         10586 42 +    134592 C-TTT-CTAA---------TCAA-----AC--------AA----------TTGAT-----ACAT-----ATA-A--A------------------CC-A----GAAG---C---AGA-G
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          21176 42 -     75465 C-TTT-CTAA---------TCAA-----AC--------AA----------TTGAT-----ACAT-----ATA-A--A------------------CC-A----GAAG---C---AGA-G
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              185063 42 -    373494 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACAT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19804971 42 +  19899266 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACAT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               3107 42 -     15069 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACGT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              3241 42 +     14865 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ATGT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                74411 42 +     78963 G-TTG-CTAA---------TCAG-----GA--------GA----------TTGAT-----CCTT-----GTA-A--A------------------AC-T----GAAA---T---AGA-G
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6846448 42 +  12164890 C-TTT-CTAA---------TCAG-----GC--------AA----------TTGAT-----GCAT-----ATA-A--A------------------AC-T----GAAA---T---GGA-G
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    665065 42 -   2312742 N-NNN-NNNN---------NNNN-----NN--------NN----------NNNNN-----NNNN-----NNN-N--N------------------NN-N----NNNN---N---NNN-N
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         1590 42 +     11805 C-TTT-CTAA---------TCAG-----GC--------AA----------TCGAT-----GCAT-----ATA-A--A------------------AC-T----GAAA---T---GGA-G
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           40925 42 +     52369 C-TTT-CTAA---------TCAG-----GC--------AA----------TCGAT-----GCAT-----ATA-A--A------------------AC-T----GAAA---T---GGA-G
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         33314 42 -     44753 C-TTT-CTAA---------TCAG-----GC--------AA----------TCGAT-----GCAT-----ATA-A--A------------------AC-T----GAAA---T---GGA-G
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            15235 42 +     27322 C-TTT-CTAA---------TCAG-----GC--------AA----------TCGAT-----GCAT-----ATA-A--A------------------AC-T----GAAA---T---GGA-G
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       14874 42 -     53241 C-TTT-CTAA---------TCAG-----GC--------AA----------TCGAT-----GCAT-----ATA-A--A------------------AC-T----GAAA---T---GGA-G
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         37145 42 -     48185 C-TTT-CTAA---------TCAG-----GC--------AA----------TCGAT-----GCAT-----ATA-A--A------------------AC-T----GAAA---T---GGA-G
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           31541 42 +     77221 C-CTC-ATCA---------TCAG-----GC--------AA----------CTTGC-----ACCT-----TTA-A--A------------------AT-T----GAAA---T---agt-a
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            2337 43 -     27784 t-ttt-gtaa---------tcag-----GC--------AA----------TCAAT-----GTAT-----ATA-A--A------------------ACTT----GAAA---T---GAA-C
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        244115 43 -    344369 C-TTT-CCAA---------TAAG-----AC--------AG----------TTGAT-----GCAT-----ATA-A--A------------------ACTT----GAAA---T---TGA-G
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13244466 45 -  17261082 C-TTT-CTAA---------TTAG-----GC--------AA----------TCGAT-----GTAT-----ATA-A--A------------------ACTG----GAAA---T-GCaga-g
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             602416 45 -   3946241 C-TTT-CTAA---------TTAG-----GC--------AA----------TCGAT-----GTAT-----ATA-A--A------------------ACTG----GAAA---T-GCaga-g
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131532189 43 - 161321710 C-TTT-CCAA---------TCAG-----GC--------AA----------TTGAT-----GCAT-----ATA-A--A------------------ACTT----GAAA---T---TGA-G
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             27236 42 +     56732 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAG-----ACGT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6803727 42 +   6970761 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAG-----ACGT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             3120 42 +     18040 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAG-----ACGT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                14290 43 +     68503 C-TTT-CTAA---------TCAA-----TT--------AA----------CTGAT-----GTAT-----ACA-A--A------------------ACTT----GAAA---T---GGA-G
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13913514 42 +  90463843 C-CTT-ATCA---------TCAG-----GC--------AA----------GTGGG-----GCAT-----TTA-G--A------------------AT-T----GAAA---T---TAT-A
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1786280 43 +   2252614 C-TTT-CTGA---------TCAC-----GT--------AA----------TTgat-----gtat-----ata-a--a------------------actg----aaaa---t---tga-g
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           13673 42 -     14454 C-TTT-CTAA---------TCAA-----AC--------AA----------TTGAG-----ACGT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206374999 42 - 206558726 C-TTT-CTAA---------TCAA-----AC--------AA----------TTGAG-----ATGT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44853899 42 -  45163003 C-TTT-CTAA---------TCAA-----AC--------AA----------TTGAG-----ACGT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                17756 45 +    109198 C-TTT-CTAA---------TTAG-----GC--------AA----------TTGAT-----GTAC-----ATA-A--A------------------ACTG----GAAA---CAA-AGA-G
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       6095 16 +     12214 C-TTT-CTAA---------TCAA-----TT--------AA-------------------------------------------------------------------------------
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 I 27
s Saimiri_boliviensis.NW_024100938.1                     15670620 42 -  43202129 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACAT-----ATA-A--A------------------CC-T----GAAA---C---AGa-g
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        2486 42 +     34089 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACAT-----ATA-A--A------------------CC-T----GAAA---C---AGA-G
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              2427 42 -     60842 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACAT-----ATA-A--A------------------CC-T----GAAA---C---AGA-G
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              2522 42 +     67014 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACAT-----ATA-A--A------------------CC-T----GAAA---C---AGA-G
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              2500 42 +     60816 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACAT-----ATA-A--A------------------CC-T----GAAA---C---AGA-G
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 2437 42 -     76454 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACAT-----ATA-A--A------------------CC-T----GAAA---C---AGA-G
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17339187 42 -  30362882 C-TTT-CTAA---------TCAA-----GT--------AA----------TTGAT-----ACAT-----ATA-A--A------------------CC-T----GAAA---C---AGA-G
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         18562 42 -     62485 C-TTT-CTAA---------TCAA-----GT--------AA----------TTGAT-----ACAT-----ATA-A--A------------------CC-T----GAAA---C---AGA-G
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   29842 42 -    114521 C-TTT-TTAA---------TCAG-----GT--------AA----------TTGAA-----GCAC-----ATA-A--A------------------TGTC----AAAA---T---TGA--
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 I 2
s Semnopithecus_entellus.k141_1527475                       25661 42 +     26421 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACGT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       6121 42 +     20762 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACGT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         39856 42 +     40653 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACGT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                           10413 42 -     12194 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACGT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     23835 42 -     27512 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACGT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         32854 42 -     33692 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACGT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   97728 24 -    120886 ----------------------------------------------------TGA-----GCAT-----TTA-A--A------------------AT-T----CAAA---T---AGT-A
i Sigmodon_hispidus.SigHis_scaffold_11332               I 6 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            16480 43 +    739146 C-TTT-CTAA---------TTAG-----TC--------AA----------TTGAC-----ACAT-----TTA-A--A------------------ACTT----GAAA---T---TAA-G
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17748696 43 -  27805282 C-TTT-CTAA---------TCAG-----GT--------AA----------TTGAT-----GGAT-----ATA-A--A------------------ACTT----GAAA---T---TGA-G
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2237976 42 +   2842873 C-TTC-CTAA---------TCAG-----GC--------AA----------TTGAT-----GCAT-----ATA-A--A------------------AC-T----GAAA---T---AGA-G
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             232872 43 -    276980 C-TTT-CCAG---------TGAG-----GC--------AG----------TTGAT-----GCAT-----AAA-A--A------------------ACTT----GAAA---T---CGA-G
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            25431 43 +     62062 C-TTT-CCAA---------TCAG-----GC--------AA----------TTGGT-----GCAT-----ATA-A--A------------------ACCT----AAAA---T---TGA-G
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189270337 47 + 218635234 C-TTT-CTAA---------TCAG-----GC--------AA-T--T--A-ATTGCT-----GTAT-----TTA-A--A------------------ACTT----GAAA---T---GGG-G
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        12790 41 -  13920577 C-TTT-CTAA---------TTAA-----GC--------AA----------TTGAT-----ACAT-----ATA-A--A------------------CC-T----GAAA---T----GA-G
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               4284 38 -      6213 T-TTT-CTAA---------TCAG-----GC--------AA----------TTAAT-----GAGT-----ATA-A--A------------------ACTT----GAAA------------
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               13207 38 +     45698 ------CTGA---------TCAG-----GC--------AA----------TTGAT-----GCAT-----GTA-A--A------------------AC-T----AAAA---T---AGG-T
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      805207 43 +   1148477 C-TTT-CTAA---------TCAG-----GC--------TA----------TTGCT-----GCAT-----ATA-A--A------------------ACTT----GAAA---T---TGA-T
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  55867 43 +     99546 C-TTT-CTAA---------TCAG-----GC--------TA----------TTGCT-----GCAT-----ATA-A--A------------------ACTT----GAAA---T---GGA-T
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               24508 42 +     42269 T-TTT-CTAA---------TCAA-----GT--------AA----------TTGAT-----GAAT-----ATA-A--A------------------AC-T----GAAA---T---GGA-G
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               57824 42 +     65473 T-TTT-CTAA---------TCAA-----GT--------AA----------TTGAT-----GAAT-----ATA-A--A------------------AC-T----GAAA---T---GGA-G
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194005150 42 - 194193292 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACGT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             37353 42 -     47444 T-TTT-CTTA---------CCAG-----GC--------AA----------TGGAT-----ACAT-----ACA-A--G------------------AT-T----TAAC---T---GGA-G
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  2084 36 +      6782 --------AA---------TCAG-----GC--------AA----------TTGAT-----GCAT-----GTT-A--A------------------AC-T----GAAA---C---AGA-T
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  134346 43 -    259118 T-TTT-GGAA---------TCAG-----GA--------AA----------TCAAT-----GTAC-----ATA-A--A------------------ACTT----GAAA---T---GAA-G
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        24231 42 +     38948 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACAT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   17958 42 -     32910 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACGT-----GTA-A--A------------------CC-T----GAAA---T---AGA-G
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       23856 42 +     24652 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACAT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      2734 42 -      3559 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACGT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           40679 42 -     54611 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACGT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       16679 42 +     17312 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACGT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    24042 42 -     25040 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACGT-----ATA-A--A------------------CC-T----GAAA---T---GGA-G
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          2703 42 +      3528 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACGT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  49070 42 +     51589 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACGT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       12246 42 +     14732 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACGT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       2723 42 -     28054 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACGT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44657518 42 -  44834318 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACGT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        2528 42 +      3372 C-TTT-CTAA---------TCAA-----GC--------AA----------TTGAT-----ACGT-----ATA-A--A------------------CC-T----GAAA---T---AGA-G
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   3694 35 +     90398 C-TTT-CTAA---------TCAA-----TT--------AA----------CTGAT-----GCAC-----GTA-A--A------------------ACTT----G---------------
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 I 3
s Trichechus_manatus.JH594618.1                          16079791 42 +  31416278 G-TTG-CTAA---------TCAG-----GA--------AA----------TTGAT-----CCAT-----GTA-A--A------------------GC-T----GAAA---T---AGA-G
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2790441 32 -   3938065 C-TTT-TTAA---------TCAG-----GC--------AG----------TATAT-----GCTT-----ATA-A--A------------------AC----------------------
i Tupaia_chinensis.KB320831.1                           I 259 I 9
s Tupaia_tana.TupTan_flattened_line_68454                    2965 32 +     13056 C-TCT-TTAA---------TCAG-----GC--------AA----------TTTAT-----GCTT-----ATA-A--A------------------AC----------------------
i Tupaia_tana.TupTan_flattened_line_68454               I 256 I 9
s Tursiops_truncatus.MRVK01000923.1                      69311916 43 -  96451834 C-TTT-CTAA---------TCAA-----TT--------AA----------CTGAT-----GCAT-----ATA-A--A------------------ACTT----GAAA---T---GGA-G
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 25038 47 -     25548 C-CTC-TTAA---------CTAT-----GC--------AA----------TTGATGCCATGCAT-----ATA-A--A------------------TCTT----GAAA---T---TGA--
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6512670 43 +  28682327 C-TTT-CCAA---------TCAG-----GC--------AA----------TTGAT-----ACAT-----ATA-A--A------------------ACTT----GAAA---T---TGA-G
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  3289 42 -     20643 C-TTT-CTAA---------TCAG-----GC--------AA----------TCGAT-----GCAT-----ATA-A--A------------------AC-T----GAAA---T---GGA-G
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             22833 42 -     33872 C-TTT-CTAA---------TCAG-----GC--------AA----------TCGAT-----GCAT-----ATA-A--A------------------AC-T----GAAA---T---GGG-G
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1523149 43 -   2331223 c-ttttttaa---------tcag-----GC--------AA----------CTGAT-----GCCT-----ATA-A--A------------------ACTT----GAAA---T----GA-G
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                135611 43 -    281493 C-TTT-CCAA---------TCAG-----GC--------AA----------TTGAT-----GCAT-----ATA-A--A------------------ACTT----GAAA---T---TGG-G
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       125075 41 -    134049 C-T-C-CTAA---------TCAG-----GC--------AA----------TTGAT-----GCAT-----ATA-A--A------------------AC-T----AAAA---T---AGA-G
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        212141 43 -    227762 C-TTT-CCAA---------TCAG-----GC--------AA----------TTGAT-----GCAT-----ATA-A--A------------------ACTT----GAAA---T---TGA-G
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 I 5
s Zapus_hudsonius.ZapHud_scaffold_64392                     13307 41 -     20485 C-TTT-CCAG---------TCA------TC--------AT----------CTGGC-----ACAT-----GTA-A--A------------------AC-G----GAAG---T---AGC-A
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 I 9
s Ziphius_cavirostris.ZipCav_flattened_line_127025           5413 43 -      8775 C-TTT-CTAA---------TCAA-----TT--------AA----------CTGAT-----GCAT-----ACA-A--A------------------ACTT----GAAA---T---GGA-G
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Mesoplodon_bidens.MesBid_scaffold_183284                   2166 255 +      2166 T
e Condylura_cristata.JH655880.1                          60611207  0 +  78930452 C
e Macaca_tonkeana.k141_2870633                               2864 158 -     27140 T
e Macaca_nigra.k141_282495                                   2859 158 -     46448 T
e Macaca_maura.k141_251854                                  43912 158 -     79256 T

a score=0.000000
s hg38.chr4_GL000008v2_random                                9815 16 +    209709 AG--TT-TT-G-CC-T-TTT--AAT
s Acinonyx_jubatus.LLWD01000356.1                         2031892 16 +   3721120 AG--TT-CT-G-CC-T-TTT--AAT
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    110567 16 -    189883 AA--TT-TT-G-TT-T-TTA--AAT
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10655227 16 +  23371972 AG--TT-CT-G-CC-T-TTT--AAT
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7091949 16 -  16596857 AG--TT-CT-G-CC-T-TCT--AAT
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   10892 16 -     22067 AG--TT-GT-C-TC-T-TTT--TAT
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_3103707                  60832 16 +     61638 AG--TT-TT-G-AC-T-TTT--ATT
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        52640 16 +     53391 AG--TT-TT-G-CC-T-TTT--ATT
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         3365 16 +     72529 AG--TT-TT-G-CC-T-TTT--ATT
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          2940 16 +      3797 AG--TT-TT-G-CC-T-TTT--ATT
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             8113 16 -     18050 AG--TT-TT-G-CC-T-TTT--AAT
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  9226 16 -     11521 AG--TT-TT-G-CC-T-TTT--AAT
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              8790 16 -     21359 AG--TT-TT-G-CC-T-TTT--AAT
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_298055                                   81 16 +      1823 AG--TT-TT-G-CC-T-TTT--AAT
i Alouatta_juara.k141_298055                            C 0 C 0
s Alouatta_macconnelli.k141_1331706                          8081 16 -     10438 AG--TT-TT-G-CC-T-TTT--AAT
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            4737 16 +      7047 AG--TT-TT-G-CC-T-TTT--AAT
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             8023 16 +     10410 AG--TT-TT-G-CC-T-TTT--AAT
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            1826 16 -      4927 AG--TT-TT-G-CC-T-TTT--AAT
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             4756 16 +      6429 AG--TT-TT-G-CC-T-TTT--AAT
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3518676 16 +   4113121 aa--tt-tt-g-cc-t-ttt--aat
i Ammotragus_lervia.NIVO01013474.1                      I 7 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      388829 16 -    631301 AG--TT-TT-G-CC-T-TTT--AAT
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            29262 16 +     33004 AA--TT-TT-T-CC-T-TTT--CAT
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 60476 14 +     78111 ----TT-TT-G-CC-T-TTT--AAT
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            3415 16 +     22701 AG--TT-TT-G-CC-T-TTT--AAT
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5747372 16 +   9889416 AG--TT-TT-G-CC-T-TTT--AAT
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             3957 16 -    104377 AG--TT-TT-G-CC-T-TTT--AAT
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               3963 16 +     23246 AG--TT-TT-G-CC-T-TTT--AAT
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     1971 16 +      5067 AG--TT-TT-G-CC-T-TTG--AAT
i Aplodontia_rufa.AprRuf_scaffold_156013                I 2 C 0
s Arctocebus_calabarensis.k141_1161114                      15913 16 +     17483 AA--TT-TT-G-CC-T-TTC--AGT
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 7225 16 -     29036 AG--TC-TG-G-CC-T-TTC--AGT
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9537207 16 +  39197703 AG--TT-TT-G-CC-T-TTT--AAT
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             58491 16 +     85812 AG--TT-TT-G-CC-T-TTT--AAT
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 9490 16 +     89302 AG--TT-TT-G-CC-T-TTT--AAT
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             13995 16 -     58268 AG--TT-TT-G-CC-T-TTT--AAT
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             61986 16 +    119057 AG--TT-TT-G-CC-T-TTT--AAT
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               3955 16 -     25888 AG--TT-TT-G-CC-T-TTT--AAT
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 4707  9 -     16375 AG--TT-TT-G-CC-----------
i Avahi_laniger.k141_2840928                            C 0 I 6
s Avahi_peyrierasi.k141_2689020                              1027  9 +      2719 AG--TT-TT-G-CC-----------
i Avahi_peyrierasi.k141_2689020                         C 0 I 6
s Balaenoptera_acutorostrata.KI537095.1                  26378676 16 +  51448160 AG--TT-TT-G-CC-C-TTT--AAT
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        3908 16 -     13118 AG--TT-TT-G-CC-C-TTT--AAT
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   41743 16 -     72089 AA--TT-TT-G-CC-T-TTT--AAT
i Beatragus_hunteri.BeaHun_scaffold_21644               I 12 C 0
s Bison_bison.KN264915.1                                  6557769 16 +   6870073 AA--TT-TT-G-CC-T-TTT--AAT
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138138008 16 - 161108492 AA--TT-TT-G-CC-T-TTT--AAT
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     570382 16 -    998990 AA--TT-TT-G-CC-T-TTT--AAT
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136293741 16 - 158972876 aa--tt-tt-g-cc-t-ttt--aat
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1229497 16 -   1914593 aa--tt-tt-g-cc-t-ttt--aat
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               111848 16 -    171031 AG--TT-TT-G-CC-T-TTT--AAT
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 10874 16 +    125063 AG--TT-TT-G-CC-T-TTT--AAT
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                12922 16 -    216513 AG--TT-TT-G-CC-T-TTT--AAT
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        5462 16 -    134917 AG--TT-TT-G-CC-T-TTT--AAT
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3218083 16 -   8989139 AG--TT-TT-G-CC-T-TTT--AAT
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           395788 16 -  15254737 AG--TT-TT-G-CC-T-TTT--AAT
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2971521 16 +   6889770 AG--TT-TT-G-CC-T-TTT--AAT
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11516607 16 +  39901454 AA--TT-CT-G-CC-T-TTT--AAT
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   11625 16 +     87036 AA--TT-CT-G-CC-T-TTT--AAT
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11263268 16 -  35597290 AA--TT-CT-G-CC-T-TTT--AAT
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11085797 16 +  39895921 AA--TT-CT-G-CC-T-TTT--AAT
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16452821 16 -  44759192 AA--TT-CT-G-CC-T-TTT--AAT
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21323752 16 + 157394656 aA--TT-TT-G-CC-T-TTT--AAT
i Capra_aegagrus.CM003214.1                             I 12 C 0
s Capra_hircus.CM004562.1                               135704979 16 - 157403528 aA--TT-TT-G-CC-T-TTT--AAT
i Capra_hircus.CM004562.1                               I 12 C 0
s Capromys_pilorides.CapPil_scaffold_979108                    82 16 -      1248 AA--TT-TT-G-CC-T-TTT--ATT
i Capromys_pilorides.CapPil_scaffold_979108             C 0 C 0
s Carlito_syrichta.NW_007248099.1                          307068 15 +    345090 -T--AT-TT-G-CC-T-TTT--AAT
i Carlito_syrichta.NW_007248099.1                       I 1 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               58023 16 +     67245 AG--TT-TG-G-CC-T-TTT--AAT
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   28509 13 +     33760 -----T-TT-T-CT-A-TTT--AAT
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   157312 16 -    276539 AG--TT-AG-G-CC-T-TTT--AAT
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15784686 16 -  24422027 AG--TT-TT-G-CC-T-TTT--AAT
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15796618 16 -  24440124 AG--TT-TT-G-CC-T-TTT--AAT
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       174809 16 +    436027 AG--TT-TT-G-CC-T-TTT--AAT
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18888701 16 -  29618158 AG--TT-TT-G-CC-T-TTT--AAT
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 6245 16 -     26817 AG--TT-TT-G-CC-T-TTT--AAT
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                10485 16 +     25043 AG--TT-TT-G-CC-T-TTT--AAT
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         6103 15 +     21754 -T--AT-TT-G-CC-T-TTT--AAT
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4362392 16 +   7569818 ag--tt-tt-g-cc-t-ttt--aat
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         2144 16 -      9338 AG--TT-TT-G-CC-T-TTT--AAT
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6552624 16 +   6739814 AG--TT-TT-G-CC-T-TTT--ATT
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      54101 16 -     54931 AG--TT-TT-G-CC-T-TTT--ATT
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         19085 16 -     19697 AG--TT-TT-G-CC-T-TTT--ATT
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         56616 16 -    107033 AG--TT-TT-G-CC-T-TTT--ATT
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        3056 16 -      3853 AG--TT-TT-G-CC-T-TTT--ATT
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          26992 16 +     30494 AG--TT-TT-G-CC-T-TTT--ATT
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           3016 16 -      4022 AG--TT-TT-G-CC-T-TTT--ATT
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          2910 16 -      3505 AG--TT-TT-G-AC-T-TTT--ATT
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           21698 16 +     35983 AG--TT-TT-G-AC-T-TTT--ATT
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11988235 16 +  12117833 AG--TT-TT-G-CC-T-TTT--ATT
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46474988 16 +  46592721 AG--TT-TT-G-AC-T-TTT--ATT
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      32815 18 +     33420 AGAGTT-TT-G-AC-T-TTT--ATT
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        2851 16 -      3443 AG--TT-TT-G-CC-T-TTT--ATT
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      3844 16 -      4669 AG--TT-TT-G-CC-T-TTT--ATT
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        3637 16 -      4411 AG--TT-TT-G-AC-T-TTT--ATT
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         3167 16 -      4205 AG--TT-TT-G-CC-T-TTT--ATT
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_1070855          1392 16 -      1715 AT--TT-TT-G-CC-T-TTT--AAT
i Chaetophractus_vellerosus.ChaVel_scaffold_1070855     C 0 C 0
s Cheirogaleus_major.k141_1157592                           57012 16 -     68416 AG--TT-TT-G-CC-T-TTT--AAT
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            6054 16 +     13308 AG--TT-TT-G-CC-T-TTT--AAT
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             3518 16 -     18223 AG--TT-TT-G-CC-T-TTT--AAT
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             20541 16 +     25473 AG--TT-TT-G-CC-T-TTT--AAT
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           39580 16 +     57117 AG--TT-TT-G-CC-T-TTT--AAT
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          44255 16 +     54541 AG--TT-TT-G-CC-T-TTT--AAT
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15959850 16 +  43084221 AG--TT-TT-G-CC-T-TTT--AAT
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         69070 16 +    196370 AG--TT-TT-G-CC-T-TTT--AAT
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          13250 16 +     40510 AG--TT-TT-G-CC-T-TTT--AAT
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15136451 16 -  15256731 AG--TT-TT-G-CC-T-TTT--ACT
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      31497 16 -     53260 AG--TT-TT-G-CC-T-TTT--ACT
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101141946 16 + 101219884 AG--TT-TT-G-CC-T-TTT--ACT
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                14976 15 -     21363 AT--TT-TT-G-CC-T--TT--AAT
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           760287 15 +    964067 AT--TT-TT-G-CC-T--TT--AAT
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_141308              7066 15 -     12508 AT--T--TT-T-CC-T-TTT--TAT
i Chrysochloris_asiatica.ChrAsi_scaffold_141308         I 3 C 0
s Colobus_angolensis.KN985967.1                          10880525 16 +  10971483 AG--TT-TT-G-CC-T-TTT--AAT
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147661683 16 + 156195979 AG--TT-TT-G-CC-T-TTT--AAT
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            13670 16 +     23629 AG--TT-TT-G-CC-T-TTT--AAT
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         37741 16 -     40477 AG--TT-TT-G-CT-T-TTG--AAT
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 275560 16 -    399297 AA--TT-TT-G-CT-T-TTT--AAT
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53027090 16 +  72327488 AA--TT-TG-G-TT-T-GTT--AAT
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             18210 16 -     19186 AG--TT-TT-G-CT-T-TTA--AAC
i Crocidura_indochinensis.CroInd_scaffold_38409         I 13 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            49905 16 -     70449 AG--TT-CT-G-CC-T-TTT--AAT
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  206258 16 -    956709 CA--AT-TT-T-CC-T-TTC--AAT
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 28619 16 -     67205 AG--TT-TT-G-CC-T-TTT--AAT
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                15457 16 +     26546 AG--TT-TT-G-CC-T-TTT--AAT
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 I 385
s Dasyprocta_punctata.DasPun_flattened_line_634             56940 16 -    236241 AG--TT-TT-G-CC-T-TTT--AAT
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          180184 16 -   6883506 at--tt-tt-g-cc-t-ttt--aat
i Dasypus_novemcinctus.JH568778.1                       I 4 C 0
s Daubentonia_madagascariensis.ctg11                     16842867 16 +  31942871 AG--TT-TG-G-CC-T-TTT--AAT
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80035362 16 -  96802777 AG--TC-TT-G-CC-T-TTT--AAT
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18697333 16 -  18957592 AG--TT-TT-G-CC-T-TTT--AAA
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 321040 16 +    993696 Ag--tt-tt-g-cc-t-ttt--aat
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   1691 16 +    151128 AG--TT-TT-G-CC-T-TTT--AAT
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   155733 16 +    228994 AA--TT-TT-G-CC-T-TTT--AAT
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3653478 13 +   4240102 -----T-TT-G-CC-T-TTT--AAT
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 25042 13 +     28912 -----T-TT-G-CC-T-TTT--AAT
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                34201 16 -     73477 AG--TT-TT-G-CT-T-TTT--ACT
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22993076 15 -  44670279 NN--N--NN-N-NN-N-NNN--NNN
i Echinops_telfairi.JH980316.1                          C 0 I 2
s Eidolon_helvum.KE772537.1                                 10710 15 +     24177 t---tt-tt-g-ct-t-ttt--aat
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1490025 16 +   1727528 AA--CT-TT-G-CC-T-TTT--AAT
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7804769 15 +  15467074 AT--T--TT-T-GC-C-TTT--AAT
i Elephantulus_edwardii.JH947210.1                      I 3 C 0
s Ellobius_lutescens.LOEQ01003611.1                        237748 16 -    369425 AA--TT-tg-g-at-t-ttt--aat
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           4761 16 -      7838 AA--TT-tg-g-tt-t-ttt--aat
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85869681 16 +  99434291 AG--TT-CT-G-CC-T-TTT--AAT
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4702286 16 +   6522550 AG--T--TT-TGCC-T-TTT--AAT
i Eptesicus_fuscus.JH977687.1                           I 8 C 0
s Equus_asinus.JREZ01000062.1                             5851462 16 -   7175178 AG--TT-TT-G-CG-T-TTT--AAT
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13349965 16 +  41866177 AG--TT-TT-G-CG-T-TTT--AAT
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          11455 16 +     92910 AG--TT-TT-G-CG-T-TTT--AAT
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11530987 16 +  16010500 ag--tt-tt-g-cc-T-TGT--GAT
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48768629 16 -  48907691 AG--TT-TT-G-CC-T-TTT--ATT
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          313563 16 +    330699 AG--TT-TT-G-CC-T-TTT--AAT
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             59994 16 +     89355 AG--TT-TT-G-CC-T-TTT--AAT
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              3058 16 +     13586 AG--TT-TT-G-CC-T-TTT--AAT
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               2993 16 -      6809 AG--TT-TT-G-CC-T-TTT--AAT
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             9468 16 +     36558 AG--TT-TT-G-CC-T-TTT--AAT
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             5783 16 +     60246 AG--TT-TT-G-CC-T-TTT--AAT
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 9266 16 +    109717 AG--TT-TT-G-CC-T-TTT--AAT
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               13645 16 +     16540 AG--TT-TT-G-CC-T-TTT--AAT
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                13921 16 +     27497 AG--TT-TT-G-CC-T-TTT--AAT
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           16387 16 +     26808 AG--TT-TT-G-CC-T-TTT--AAT
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                31111 16 +     46535 AG--TT-TT-G-CC-T-TTT--AAT
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              13834 16 -     29447 AG--TT-TT-G-CC-T-TTT--AAT
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129890868 16 - 159252932 AG--TT-CT-G-CC-T-TTT--AAT
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129277939 16 - 158578461 AG--TT-CT-G-CC-T-TTT--AAT
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 19078 16 +     52776 AG--TT-CT-G-CC-T-TTT--AAT
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13890797 16 -  19261668 AG--TT-TT-G-CC-T-TTG--AAT
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     208968 16 -    847004 AA--TT-GT-C-CC-T-TTT--AAT
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           11349 16 -     43889 AA--TT-GT-C-CC-T-TTT--AAT
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           8413 16 +     27357 AA--TT-GT-C-CC-T-TTT--AAT
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               154330  6 +    324696 AG--TT-TT----------------
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 I 3
s Giraffa_tippelskirchi.LVKQ01S012154.1                    179540 16 -    189561 aa--tt-tt-g-cc-t-ttt--att
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           10738 16 -     18683 AG--CT-TT-G-CC-T-TTT--AAT
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               3213 16 -     14630 AG--TT-CT-G-CC-T-TTT--AAT
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119650312 16 - 195582420 AG--TT-CT-G-CC-T-TTT--AAT
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   75485 16 +    118900 AG--CT-TT-G-CC-T-TTT--AAT
i Graphiurus_murinus.GraMur_scaffold_4493               I 216 C 0
s Hapalemur_alaotrensis.k141_1198205                         3618 16 +      3980 AG--TT-TT-A-CC-T-TTT--AAT
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             26094 16 +     26611 AG--TT-TT-A-CC-T-TTT--AAT
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             3554 16 +     56096 AG--TT-TT-A-CC-T-TTT--AAT
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        26831 16 -     42470 AG--TT-TT-A-CC-T-TTT--AAT
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        43425 16 -     54384 AG--TT-TT-A-CC-T-TTT--AAT
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              15114 16 +     53719 AG--TT-CT-T-CC-T-TTT--AAT
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                26024 16 -     91191 AA--TT-TT-G-CC-T-TTT--AAT
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 12 C 0
s Heterocephalus_glaber.JH602058.1                        2549183 16 +  31725842 AG--TT-TT-G-CC-T-TTT--AAT
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               54586 15 +     73687 AC--T--GT-G-CT-T-TTT--AAT
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              145595 16 +    277961 AG--TT-TG-G-CC-T-TTT--AAT
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      276945 14 -    477199 ----TT-CT-G-CC-T-TTT--AAT
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              6103 16 -      9143 AC--TT-TT-G-CC-T-TTT--AAT
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg649                                    99893 16 +    115816 AG--TT-TT-G-CC-T-TTT--AAT
i Hoolock_leuconedys.ctg649                                I 69 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 14169 16 -     67322 AG--TT-CT-G-CC-T-TTT--AAT
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           17102 17 -    119109 AG--TTTTT-G-CC-T-TTG--AAT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              3033 16 +      5897 AG--TT-TT-G-CC-T-TTT--AAT
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_1485652                              1454 16 -      1697 AG--TT-TT-G-CC-T-TTT--AAT
i Hylobates_agilis.k141_1485652                         C 0 C 0
s Hylobates_klossii.k141_466549                              9478 16 +     11537 AG--TT-TT-G-CC-T-TTT--AAT
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14622579 16 -  25970782 AG--TT-TT-G-CC-T-TTT--AAT
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1133650                            2468 16 -      2775 AG--TT-TT-G-CC-T-TTT--AAT
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             31966 16 -     60944 AG--TT-TT-G-CC-T-TTT--AAT
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     4230 16 +     22540 AG--TT-TT-G-CC-T-TTT--AAT
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7124102 17 +  13083262 AG--TTTTT-G-CC-T-TTT--AAT
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_1884019                                   1298 16 -      2196 AG--TT-TT-G-CC-T-TTT--AAT
i Indri_indri.k141_1884019                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               7350 16 +     17520 AG--TC-TT-G-CT-T-TTT--AAT
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8563632 16 +  11848649 AG--TT-GT-C-TC-T-TTT--AAT
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               22175 16 +     37189 AG--TC-TT-G-CC-T-TTT--AAT
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          48076 16 -    147782 AG--TT-TT-G-CC-T-TTT--AAT
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   112080 15 -    115756 AA--T--TT-A-CC-T-TTT--AAT
i Lasiurus_borealis.LasBor_scaffold_5102                I 8 C 0
s Lemur_catta.scaffold_1                                258405114 16 - 285822530 AG--TT-TC-A-CC-T-TTT--AAT
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        21984 15 +     39228 AG--TT-T--G-CC-T-TTT--AAT
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            51359 15 +     63517 AG--TT-T--G-CC-T-TTT--AAT
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        76602 15 +    116806 AG--TT-T--G-CC-T-TTT--AAT
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     29623 15 -     33031 AG--TT-T--G-CC-T-TTT--AAT
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3083893 16 -   3498232 AG--TT-CT-G-CC-T-TTT--AAT
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    11089 16 +     22452 AG--AT-TT-G-CC-T-TTT--AAT
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            134510 16 +   3060487 AG--TC-TT-G-CC-T-TTT--AAT
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19245712 16 +  19376315 AG--TT-TT-G-CC-T-TTT--ATT
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            8713 16 +     84689 AT--TT-TT-G-CC-T-TTT--AAT
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3776464 16 +   6799190 AT--TT-TT-G-CC-T-TTT--AAT
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20589383 15 -  62548349 AT--T--GT-G-CC-T-TTT--CAT
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11085253 16 +  39895028 AA--TT-CT-G-CC-T-TTT--AAT
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             17398 14 +     74745 ----TT-TT-G-CC-T-TTT--AAT
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12703904 14 +  12821369 ----TT-TT-G-CC-T-TTT--AAT
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               6000 14 +      6569 ----TT-TT-G-CC-T-TTT--AAT
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           44302 14 +     63263 ----TT-TT-G-CC-T-TTT--AAT
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_925451                                  310 14 +     10231 ----TT-TT-G-CC-T-TTT--AAT
i Macaca_fuscata.k119_925451                            C 0 C 0
s Macaca_leonina.k141_3421209                                2451 14 +      3017 ----TT-TT-G-CC-T-TTT--AAT
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_mulatta.NC_041755.1                            196032981 14 + 196197964 ----TT-TT-G-CC-T-TTT--AAT
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11443087 14 +  11645122 ----TT-TT-G-CC-T-TTT--AAT
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_radiata.k141_1580474                                2843 14 -      3617 ----TT-TT-G-TC-T-TTT--AAT
i Macaca_radiata.k141_1580474                           I 2 C 0
s Macaca_siberu.k141_741907                                 13173 14 -     55006 ----TT-TT-G-CC-T-TTT--AAT
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43838210 14 +  43892939 ----TT-TT-G-CC-T-TTT--AAT
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                5432 14 -      5978 ----TT-TT-G-CC-T-TTT--AAT
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                700126 15 +    802869 T---TT-TT-G-CT-T-TTT--AAT
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43434872 16 -  43563597 AG--TT-TT-G-CC-T-TTT--ATT
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4447698 16 -   4543643 AG--TT-TT-G-CC-T-TTT--ATT
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            144617 16 +    252755 AG--TT-TT-G-CC-T-CTG--ATT
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             34691 16 +     58827 AG--TA-TG-G-CC-T-CTG--ATT
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36871937 17 +  64221397 AG--TTTTT-G-CC-T-TTT--AAT
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       62785 16 -    234502 AG--TT-TT-G-CC-T-TTT--AAT
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_146202             491 16 -      1999 AG--TT-CT-G-CC-T-TTT--AAT
i Mellivora_capensis.MelCap_flattened_line_146202       C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               10044 16 +     15977 AA--TT-TT-G-TT-T-TTT--AAC
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1044829 16 -  26018355 AA--AT-TG-G-AT-T-GTT--AAT
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Microcebus_murinus.CM007691.1                          16508234 16 +  47401472 AG--TT-CT-G-CC-T-TTT--AAT
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  29501 15 -     48017 AT--T--TT-G-CC-T-CTT--CAT
i Microgale_talazaci.MicTal_scaffold_34660              C 0 I 2
s Micronycteris_hirsuta.MicHir_scaffold_37978               21200 16 -     32043 AG--TT-TT-G-CC-T-TTT--AAT
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22817948 16 -  98408828 aa--tt-tg-g-tt-t-ttt--aat
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8207956 15 +  10048721 AG--C--TT-G-CC-T-TTC--AAT
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            32628 15 +     45743 AG--C--TT-G-CC-T-TTC--AAT
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        33531 14 +     34273 ----TT-TT-G-AC-T-TTT--ATT
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         9199 16 -    104932 AG--TT-CT-G-CC-T-TTT--AAT
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     3635 16 +      8497 AG--TT-CT-G-CC-T-TTT--AAT
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 144945 16 +    154973 AG--TC-TT-G-CC-T-TTT--AAT
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                159711 16 +    265003 AG--TT-TT-A-CC-T-TTT--AAT
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 3127 16 -      4346 AA--TT-TT-G-CC-T-TTT--AAT
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  142807 16 -    168139 GG--TT-CT-T-CC-T-TTT--AAT
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          17592 16 -    100666 AG--T--TTTG-CC-T-TTT--ATT
i Murina_feae.MurFea_scaffold_2254                      I 6 C 0
s Mus_caroli.LT608236.1                                  70764468  6 +  92629107 -----------------tgt--aat
i Mus_caroli.LT608236.1                                 I 5 C 0
s Mus_musculus.chr16                                     75487500 16 +  98207768 cA--TT-TT-G-TC-T-TGT--AAT
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67553672 16 +  89017189 ca--tt-tt-g-tt-t-tgt--aat
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74328682 16 +  97876770 ca--tt-tt-g-tc-t-tgt--aat
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              9222 16 +     98495 AG--AT-TT-G-CC-T-TTT--AAT
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4422063 16 -  28371801 AG--TT-CT-G-CC-T-TTT--AAT
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     88149 16 -    117718 AA--TT-TT-G-CC-T-TTT--AAT
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               965915 16 +   8389877 AG--T--TTTG-C-CT-TTT--AAT
i Myotis_brandtii.KE161952.1                            I 8 C 0
s Myotis_davidii.KB114863.1                               5017606 15 +   6462685 AG--T--TTTG-C--T-TTT--AAT
i Myotis_davidii.KB114863.1                             I 8 C 0
s Myotis_lucifugus.GL429887.1                             3463502 16 -   3747815 AG--T--TTTG-C-CT-TTT--AAT
i Myotis_lucifugus.GL429887.1                           I 8 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         8697 15 +     66751 AG--T--TTTG-C--T-TTT--AAT
i Myotis_myotis.MyoMyo_scaffold_6123                    I 8 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3569 16 -      8794 AT--TT-TT-G-CC-T-TTT--TAT
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            108558 16 +    362372 AA--TT-TG-G-CT-T-TTC--AAT
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               5909 16 +     48152 AG--TT-TT-G-CC-T-TTT--CGT
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4482798 16 -  14209539 AG--TT-CT-G-CC-T-TTT--AAT
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3949558 16 -   4490290 AG--TC-TT-G-CC-T-TTT--AAT
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  47826 16 +     94413 AG--TT-CT-G-CC-T-TTT--AAT
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1439838                            781 16 +      3718 AG--TT-TT-G-CC-T-TTT--AAT
i Nomascus_annamensis.k141_1439838                      C 0 C 0
s Nomascus_concolor.k141_49591                               1004 16 +      2014 AG--TT-TT-G-CC-T-TTT--AAT
i Nomascus_concolor.k141_49591                          C 0 C 0
s Nomascus_gabriellae.k141_906566                            2332 16 -      2544 AG--TT-TT-G-CC-T-TTT--AAT
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             22808 16 -  18771707 AG--TT-TT-G-CC-T-TTT--AAT
i Nomascus_siki_b.tarseq_80                         I 41 C 0
s Nomascus_siki_a.k141_595747                                   557 16 +      4512 AG--TT-TT-G-CC-T-TTT--AAT
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                28246 16 +   3668941 AA--TT-CT-G-CC-T-TTT--AAT
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            29989799 16 +  95554990 AT--TT-TT-G-CC-T-ATT--AAT
i Nycticebus_bengalensis.LG16                           n 34 C 0
s Nycticebus_coucang.k141_2051882                            4530 16 -      6470 AT--TT-TT-G-CC-T-ATT--AAT
i Nycticebus_coucang.k141_2051882                       n 262 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      23744990 16 -  89412551 AT--TT-TT-G-CC-T-ATT--AAT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     n 34 C 0
s Ochotona_princeps.JH802095.1                            4994053 16 -  23139505 ag--gt-tt-t-tc-t-tta--ttt
i Ochotona_princeps.JH802095.1                          I 2 C 0
s Octodon_degus.JH651621.1                                3683641 16 +  10294119 AG--TT-TT-G-CC-T-TTT--AAT
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             677453  7 -   3126709 ---------------T-TTT--AAT
i Odobenus_rosmarus.KB229369.1                          I 8 C 0
s Odocoileus_virginianus.KZ101650.1                       1078264  7 +   1425656 ---------------T-TTT--AAT
i Odocoileus_virginianus.KZ101650.1                     I 9 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         35410  8 +     78940 aa--tt-tt-g-c------------
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 I 6
s Ondatra_zibethicus.OndZib_scaffold_6821                  123222 16 +    145789 AA--TT-TG-T-TT-T-TTT--AAT
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  34977 16 +     62360 AA--TT-TA-T-TT-T-TTT--AAT
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7223242 16 -   7562323 AG--TC-TT-G-CC-T-TTT--AAT
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              41624 15 -     66828 AT--T--TT-G-CC-T-TTT--AAT
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141873748 16 + 163896628 AG--AT-TT-G-CC-T-TTT--AAT
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      305585 16 -    505867 AA--TT-CT-G-CC-T-TTT--AAT
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       37056 16 +     38679 AA--TT-GT-C-CC-T-TTT--AAT
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18006498 16 -  38779656 AA--TT-GT-C-CC-T-TTT--AAT
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134075817 16 - 275406953 aA--TT-TT-G-CC-T-TTT--AAT
i Ovis_aries.CM001582.2                                 I 12 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      77031 16 +    140051 AA--TT-TT-G-CC-T-TTT--AAT
i Ovis_canadensis.OviCan_scaffold_6251                  I 12 C 0
s Pan_paniscus.CM003386.1                               127572557 16 - 205426864 AG--TT-CT-G-CC-T-TTT--AAT
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.KZ622857.1                               325544 16 +    772158 AG--TT-TT-G-CC-T-TTT--AAT
i Pan_troglodytes.KZ622857.1                            I 81 I 19
s Panthera_onca.PanOnc_flattened_line_1615                  32269 16 +    295523 AG--TT-CT-G-CC-T-TTT--AAT
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3636003 16 +  18214204 AG--TT-CT-G-CC-T-TTT--AAT
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5025650 16 -   6340057 AG--TT-CT-G-CC-T-TTT--AAT
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1064678 16 -   1292953 aa--tt-tt-g-cc-t-ttt--aat
i Pantholops_hodgsonii.KE114631.1                       I 12 C 0
s Papio_anubis.CM001492.2                               188153656 16 - 188283584 AG--TT-TT-G-CC-T-TTT--ATT
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            49868 16 +     76494 AG--TT-TT-G-CC-T-TTT--ATT
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47511053 16 +  47705337 AG--TT-TT-G-CC-T-TTT--ATT
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 65030 16 -    104429 AG--TT-TT-G-CC-T-TTT--ATT
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  14821 16 -     29451 AG--TT-TT-G-CC-T-TTT--ATT
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                35224 16 +     35859 AG--TT-TT-G-CC-T-TTT--ATT
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113569 16 -    135482 AG--CT-CT-G-CC-T-TTT--AAT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           3106 16 -     23713 AA--TT-TT-G-CC-T-TTC--AGT
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            22405 16 -     27972 AA--TT-TT-G-CC-T-TTC--AGT
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      41023 13 -     45160 -----T-TT-T-CC-T-TTT--AAT
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4948153 17 -   8017169 AA--TTTTG-C-TT-T-TCT--AAT
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    10335 15 -     36578 -G--TT-TT-G-TC-T-TTT--AAT
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            119859 16 -    122454 AG--TC-TT-G-CC-T-TTT--AAT
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           2914 16 -      3310 AG--TT-TT-G-CC-T-TTT--AAT
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       22819 16 -     82327 AG--TT-TT-G-CC-T-TTT--AAT
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           19566 16 +     19957 AG--TT-TT-G-CC-T-TTT--AAT
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26737580 16 +  26888534 AG--TT-TT-G-CC-T-TTT--AAT
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            95365 16 +    112873 AG--T--TT-TGCC-T-TTT--AAT
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        I 8 C 0
s Pithecia_albicans.k141_991845                             41557 16 -     61926 AG--TT-TT-G-CC-T-TTT--AAT
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        22986 16 +     78826 AG--TT-TT-G-CC-T-TTT--AAT
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              6937 16 -     15800 AG--TT-TT-G-CC-T-TTT--AAT
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        10135 16 -     16101 AG--TT-TT-G-CC-T-TTT--AAT
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          3444 16 +      9673 AG--TT-TT-G-CC-T-TTT--AAT
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13472438 16 -  19735023 AG--TT-TT-G-CC-T-TTT--AAT
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           11346 16 -     31692 AG--TT-TT-G-CC-T-TTT--AAT
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           3925 16 +     21690 AG--TC-TT-G-CC-T-TTT--AAA
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       20783 15 +     44506 AG--TT-T--G-CC-T-TTT--AAT
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        20993 15 +     67491 AG--TT-T--G-CC-T-TTT--AAT
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      11234 15 -     98129 AG--TT-T--G-CC-T-TTT--AAT
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     20839 15 +    147771 AG--TT-T--G-CC-T-TTT--AAT
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        21089 15 -     23762 AG--TT-T--G-CC-T-TTT--AAT
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          1555 15 -     55515 AG--TT-T--G-CC-T-TTT--AAT
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         20908 15 +    152463 AG--TT-T--G-CC-T-TTT--AAT
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      7668 15 +      8943 AG--TT-T--G-CC-T-TTT--AAT
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                         10628 15 +    134592 AG--TT-A--G-CC-T-TTT--AAT
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          21218 15 -     75465 AG--TT-T--G-CC-T-TTT--AAT
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              185105 16 -    373494 AG--TT-TT-G-CC-T-TTT--AAT
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19805013 16 +  19899266 AG--TT-TT-G-CC-T-TTT--AAT
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               3149 16 -     15069 CG--TT-TT-G-CC-T-TTT--AAT
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              3283 16 +     14865 CG--TT-TT-G-CC-T-TTT--AAT
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                74453 15 +     78963 AC--T--GT-G-CC-T-TTT--AAT
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6846490 16 +  12164890 AG--TT-TT-A-CC-T-TTT--AAT
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    665107 16 -   2312742 NN--NN-NN-N-NN-N-NNN--NNN
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         1632 16 +     11805 AG--TT-TT-G-CC-T-TTT--AAT
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           40967 16 +     52369 AG--TT-TT-G-TC-T-TTT--AAT
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         33356 16 -     44753 AG--TT-TT-G-CC-T-TTT--AAT
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            15277 16 +     27322 AG--TT-TT-G-CC-T-TTT--AAT
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       14916 16 -     53241 AG--TT-TT-G-CC-T-TTT--AAT
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         37187 16 -     48185 AG--TT-TT-G-CC-T-TTT--AAT
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           31583 17 +     77221 ac--tt-tt-g-tt-ttttt--aat
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            2380 16 -     27784 AG--TT-TT-A-CC-T-TTT--AAT
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        244158 16 -    344369 AG--TT-CT-G-CC-T-TTG--AAT
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13244511 15 -  17261082 t---tt-tt-g-tc-t-ttt--aat
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             602461 15 -   3946241 t---tt-tt-g-tc-t-ttt--aat
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131532232 16 - 161321710 AG--TT-CT-G-CC-T-TTT--AAT
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             27278 16 +     56732 AG--TT-TT-G-CC-T-TTT--AAT
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6803769 16 +   6970761 AG--TT-TT-G-CC-T-TTT--AAT
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             3162 16 +     18040 AG--TT-TT-G-CC-T-TTT--AAT
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                14333 16 +     68503 AA--CT-TT-G-CC-T-TTT--AAT
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13913556 16 +  90463843 AA--TT-TT-G-TT-C-TCT--AAT
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1786323 16 +   2252614 aG--TT-AT-G-CC-T-TTT--AAT
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           13715 16 -     14454 AG--TT-TT-G-CC-T-TTT--AAT
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206375041 16 - 206558726 AG--TT-TT-G-CC-T-TTT--AAT
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44853941 16 -  45163003 AG--TT-TT-G-CC-T-TTT--AAT
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                17801 15 +    109198 T---TT-TT-G-CT-T-TTT--AAT
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       6138 16 +     12214 AA--TT-TT-G-CC-T-TTT--AAT
i Saiga_tatarica.SaiTat_scaffold_82192                  I 27 I 1
s Saimiri_boliviensis.NW_024100938.1                     15670662 16 -  43202129 ag--tt-tt-t-cc-t-ttt--aat
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        2528 16 +     34089 AG--TT-TT-T-CC-T-TTT--AAT
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              2469 16 -     60842 AG--TT-TT-T-CC-T-TTT--AAT
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              2564 16 +     67014 AG--TT-TT-T-CC-T-TTT--AAT
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              2542 16 +     60816 AG--TT-TT-T-CC-T-TTT--AAT
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 2479 16 -     76454 AG--TT-TT-T-CC-T-TTT--AAT
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17339229 16 -  30362882 AG--TT-TT-G-CC-T-TTT--AAT
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         18604 16 -     62485 AG--TT-TT-G-CC-T-TTT--AAT
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   29886 15 -    114521 -G--TC-TT-G-CC-A-TTT--AAT
i Scalopus_aquaticus.ScaAqu_scaffold_9300               I 2 C 0
s Semnopithecus_entellus.k141_1527475                       25703 16 +     26421 AG--TT-TT-G-CC-T-TTT--AAT
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       6163 16 +     20762 AG--TT-TT-G-CC-T-TTT--AAT
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         39898 16 +     40653 AG--TT-TT-G-CC-T-TTT--AAT
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                           10455 16 -     12194 AG--TT-TT-G-CC-T-TTT--AAT
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     23877 16 -     27512 AG--TT-TT-G-CC-T-TTT--AAT
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         32896 16 -     33692 AG--TT-TT-G-CC-T-TTT--AAT
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   97752 18 -    120886 AA--TT-TG-T-TT-T-TTTTAAAT
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            16523 16 +    739146 GG--TT-TT-T-AC-T-TTG--AAT
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17748739 16 -  27805282 AA--TN-NN-N-NN-N-NNN--NNN
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2238018 17 +   2842873 AG--TTTTT-G-CC-T-TTT--AAT
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             232915 16 -    276980 AG--TT-CT-G-CC-T-TTT--AAT
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            25474 16 +     62062 AG--TT-CT-G-CC-T-TTT--AAT
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189270384 16 + 218635234 AG--TT-AT-G-CC-T-TTT--AAT
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        12831 16 -  13920577 AG--TT-TT-G-TC-T-TTT--AAT
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               4322 16 -      6213 AG--TT-TT-G-CC-T-TTT--AAT
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               13245 16 +     45698 AT--TT-TT-G-CC-T-TTT--TAT
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      805250 16 +   1148477 AG--TT-TT-G-CC-T-TTT--AAT
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  55910 16 +     99546 AG--TT-TT-G-CC-T-TTT--AAT
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               24550 16 +     42269 AT--AT-TT-G-CC-T-TTT--AAT
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               57866 16 +     65473 AT--AT-TT-G-CC-T-TTT--AAT
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194005192 16 - 194193292 AG--TT-TT-G-CC-T-TTT--ATT
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             37395 16 -     47444 TG--TT-TT-G-CC-T-TTT--AAT
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  2120 16 +      6782 AT--TT-TT-G-CC-T-TTT--AAT
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  134389 16 -    259118 AG--TT-TG-G-CC-T-TTT--AAT
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        24273 16 +     38948 AG--TT-TT-G-CC-T-TTT--AAT
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   18000 16 -     32910 AG--TT-TT-G-CC-T-TTT--AAT
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       23898 16 +     24652 AG--TT-TT-G-CC-T-TTT--AAT
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      2776 16 -      3559 AG--TT-TT-G-CC-T-TTT--AAT
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           40721 16 -     54611 AG--TT-TT-G-CC-T-TTT--AGT
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       16721 16 +     17312 AG--TT-TT-G-CC-T-TTT--AAT
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    24084 16 -     25040 AG--TT-TT-G-CC-T-TTT--AAT
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          2745 16 +      3528 AG--TT-TT-G-CC-T-TTT--AAT
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  49112 16 +     51589 AG--TT-TT-G-CC-T-TTT--AAT
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       12288 16 +     14732 AG--TT-TT-G-CC-T-TTT--AAT
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       2765 16 -     28054 AG--TT-TT-G-CC-T-TTT--AAT
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44657560 16 -  44834318 AG--TT-TT-G-CC-T-TTT--AAT
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        2570 16 +      3372 AG--TT-TT-G-CC-T-TTT--AGT
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   3732 16 +     90398 AG--TT-TT-G-CC-T-TTT--AAT
i Tragulus_javanicus.TraJav_scaffold_14717              I 3 C 0
s Trichechus_manatus.JH594618.1                          16079833 15 +  31416278 AT--T--GT-G-CC-T-TTT--AAT
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2790482 16 -   3938065 AA--TT-GT-C-CC-T-TTT--AGT
i Tupaia_chinensis.KB320831.1                           I 9 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    3006 16 +     13056 AA--TT-TT-C-CC-T-TTT--AGT
i Tupaia_tana.TupTan_flattened_line_68454               I 9 C 0
s Tursiops_truncatus.MRVK01000923.1                      69311959 16 -  96451834 AG--TC-TT-G-CC-T-TTT--AAT
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 25085 15 -     25548 -G--TT-TT-G-CC-T-TTT--AAT
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6512713 16 +  28682327 AG--TT-CT-G-CC-T-TTT--AAT
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  3331 16 -     20643 AG--TT-TT-G-CC-T-TTT--AAT
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             22875 16 -     33872 AG--TT-TT-G-CC-T-TTT--AAT
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1523192 16 -   2331223 AG--TT-TT-G-CC-T-TTT--AAT
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                135654 16 -    281493 AA--TT-CT-G-CC-T-TTT--AAT
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       125116 16 -    134049 AG--TT-TT-G-CC-T-TTT--AAT
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        212189  7 -    227762 ---------------T-TTT--AAT
i Zalophus_californianus.ZalCal_flattened_line_4097     I 5 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     13357  6 -     20485 -----------------TTT--AAT
i Zapus_hudsonius.ZapHud_scaffold_64392                 I 9 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           5456 16 -      8775 AG--TC-TT-G-CC-T-TTT--AAT
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Mesoplodon_bidens.MesBid_scaffold_183284                   2166 255 +      2166 T
e Condylura_cristata.JH655880.1                          60611207  0 +  78930452 C
e Macaca_tonkeana.k141_2870633                               2864 158 -     27140 T
e Macaca_nigra.k141_282495                                   2859 158 -     46448 T
e Macaca_maura.k141_251854                                  43912 158 -     79256 T

a score=0.000000
s hg38.chr4_GL000008v2_random                                9831 16 +    209709 T-----A--G--ATACA-----T-TGTT--------------A-----CG
s Acinonyx_jubatus.LLWD01000356.1                         2031908 20 +   3721120 t-----a--g--ataaa-----c-ta--taaaaa--------a-----ac
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    110583 15 -    189883 C-----G--T--ATGCG-----T-TAT---------------G-----TG
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10655243 27 +  23371972 T-----A--G--ataaa-----c-tat-aagaaaaaaaaa--a-----ag
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7091965 21 -  16596857 t-----a--g--ataaa-----c-tat-aaaaaa--------a-----ag
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   10908 15 -     22067 T-----G--G--ATACA-----C-TAC---------------T-----AG
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_3103707                  60848 16 +     61638 T-----A--G--ACACA-----T-TGTT--------------A-----AG
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        52656 16 +     53391 T-----A--G--ATACA-----T-TGTT--------------A-----AG
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         3381 16 +     72529 T-----A--G--ATACA-----T-TGTT--------------A-----AG
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          2956 16 +      3797 T-----A--G--ATACA-----T-TGTT--------------A-----AG
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             8129 16 -     18050 T-----A--G--GTACA-----T-TGTT--------------A-----AG
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  9242 16 -     11521 T-----A--G--GTACA-----T-TGTT--------------A-----AG
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              8806 16 -     21359 T-----A--G--GTACA-----T-TGTT--------------A-----AG
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_298055                                   97 16 +      1823 T-----A--G--GTACA-----T-TGTT--------------A-----AG
i Alouatta_juara.k141_298055                            C 0 C 0
s Alouatta_macconnelli.k141_1331706                          8097 16 -     10438 T-----A--G--GTACA-----T-TGTT--------------A-----AG
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            4753 16 +      7047 T-----A--G--GTACA-----T-TGTT--------------A-----AG
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             8039 16 +     10410 T-----A--G--GTACA-----T-TGTT--------------A-----AG
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            1842 16 -      4927 T-----A--G--GTACA-----T-TGTT--------------A-----AG
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             4772 16 +      6429 T-----A--G--GTACA-----T-TGTT--------------A-----AG
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3518692 15 +   4113121 t-----A--G--ATACA-----C-TGT---------------A-----AG
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      388845 15 -    631301 T-----A--G--ACATA-----C-TAT---------------A-----AG
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            29278 15 +     33004 T-----A--G--ACACA-----C-TGT---------------A-----AG
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 60490 16 +     78111 T-----A--G--ATACA-----T-TGTT--------------A-----AG
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            3431 16 +     22701 T-----A--G--ATACA-----T-TGTT--------------A-----AG
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5747388 16 +   9889416 T-----A--G--ATACA-----T-TGTT--------------A-----AG
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             3973 16 -    104377 T-----A--A--ATACA-----T-TGTT--------------A-----AG
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               3979 16 +     23246 T-----A--G--ATACA-----T-TGTT--------------A-----AG
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     1987 15 +      5067 T-----A--C--GTACA-----C-TCT---------------T-----GG
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      15929 15 +     17483 C-----A--T--ATACA-----C-CAT---------------A-----GG
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 7241 15 -     29036 T-----A--G--ACGTA-----C-TAT---------------A-----AG
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9537223 16 +  39197703 T-----A--G--ATACA-----T-TGTT--------------A-----AG
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             58507 16 +     85812 T-----A--G--ATACA-----T-TGTT--------------A-----AG
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 9506 16 +     89302 T-----A--G--ATACA-----T-TGTT--------------A-----AG
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             14011 16 -     58268 T-----A--G--ATACA-----T-TGTT--------------A-----AG
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             62002 16 +    119057 T-----A--G--ATACA-----T-TGTT--------------A-----AG
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               3971 16 -     25888 T-----A--G--ATACA-----T-TGTT--------------A-----AG
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 4722 15 -     16375 T-----A--G--ATACA-----C-TAT---------------A-----GG
i Avahi_laniger.k141_2840928                            I 6 C 0
s Avahi_peyrierasi.k141_2689020                              1042 15 +      2719 T-----A--G--ATACA-----C-TAT---------------A-----GG
i Avahi_peyrierasi.k141_2689020                         I 6 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26378692 15 +  51448160 T-----A--G--ATACA-----C-TAT---------------A-----AG
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        3924 15 -     13118 T-----A--G--ATACA-----C-TAT---------------A-----AG
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   41759 15 -     72089 T-----A--G--ATACA-----C-TGT---------------A-----AG
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6557785 15 +   6870073 T-----A--G--ATACA-----C-TGT---------------A-----AG
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138138024 15 - 161108492 T-----A--G--ATACA-----C-TGT---------------A-----AG
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     570398 15 -    998990 T-----A--G--ATACA-----C-TGT---------------A-----AG
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136293757 15 - 158972876 t-----a--g--ATACA-----C-TGT---------------A-----AG
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1229513 15 -   1914593 t-----a--G--ATACA-----C-TGT---------------A-----AG
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               111864 16 -    171031 T-----A--G--ATACG-----T-TGTT--------------A-----AG
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 10890 16 +    125063 T-----A--G--ATACG-----T-TGTT--------------A-----AG
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                12938 16 -    216513 C-----A--G--ATACG-----T-TGTT--------------A-----AG
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        5478 16 -    134917 T-----A--G--ATACG-----T-TGTT--------------A-----AG
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3218099 15 -   8989139 T-----A--G--ATACA-----C-TAC---------------A-----AG
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           395804 15 -  15254737 T-----A--G--ATACA-----C-TAC---------------A-----AG
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2971537 15 +   6889770 T-----A--G--ATACA-----C-TAC---------------A-----AG
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11516623 21 +  39901454 T-----A--G--GTAAA-----C-TAT---------AAAAAAA-----AG
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   11641 21 +     87036 T-----A--G--GTAAA-----C-TAT---------AAAAAGA-----AG
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11263284 21 -  35597290 T-----A--G--GTAAA-----C-TAT---------AAAAAGA-----AG
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11085813 21 +  39895921 T-----A--G--GTAAA-----C-TAT---------AAAAAGA-----AG
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16452837 21 -  44759192 T-----A--g--gtaaa-----c-tat-aaaaaa--------a-----ag
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21323768 15 + 157394656 T-----A--G--ATACA-----C-TGT---------------A-----AG
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135704995 15 - 157403528 T-----A--G--ATACA-----C-TGT---------------A-----AG
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_979108                    98 20 -      1248 T-----A--G--ATATTCTGTAC-TAT---------------A-----TG
i Capromys_pilorides.CapPil_scaffold_979108             C 0 C 0
s Carlito_syrichta.NW_007248099.1                          307083 15 +    345090 T-----A--G--ATATA-----T-TGT---------------A-----AG
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               58039 13 +     67245 T-----A--G--AC--A-----C-TAT---------------A-----AA
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   28522 16 +     33760 T-----A--A--TTATA-----C-TTT---------------T---G-GG
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   157328 15 -    276539 T-----A--T--ATACA-----C-TAT---------------A-----AG
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15784702 20 -  24422027 T-----A--G--ATATGCTATAC-TAT---------------G-----TG
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15796634 20 -  24440124 T-----A--G--ATATGCTATAC-TAT---------------G-----TG
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       174825 20 +    436027 T-----A--G--ATATGCTATAC-TAT---------------G-----TG
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18888717 16 -  29618158 T-----A--G--ATACA-----C-TGGT--------------A-----AG
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 6261 16 -     26817 T-----A--G--ATACA-----C-TGGT--------------A-----AG
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                10501 16 +     25043 T-----A--G--ATACA-----C-TGGT--------------A-----AG
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         6118 14 +     21754 T-----A--G--ATATA-----T-TGT---------------A-----A-
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4362408 15 +   7569818 t-----a--g--aTACA-----C-TGT---------------A-----AG
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         2160 15 -      9338 T-----A--G--ATACA-----C-TGT---------------A-----AG
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6552640 16 +   6739814 T-----A--G--ATACA-----T-TGTT--------------A-----AG
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      54117 16 -     54931 T-----A--G--ATACA-----T-TGTT--------------A-----AG
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         19101 16 -     19697 T-----A--G--ATACA-----T-TGTT--------------A-----AG
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         56632 16 -    107033 T-----A--G--ATACA-----T-TGTT--------------A-----AG
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        3072 16 -      3853 T-----A--G--ATACA-----T-TGTT--------------A-----AG
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          27008 16 +     30494 T-----A--G--ATACA-----T-TGTT--------------A-----AG
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           3032 16 -      4022 T-----A--G--ATACA-----T-TGTT--------------A-----AG
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          2926 16 -      3505 T-----A--T--ATACA-----T-TGTT--------------A-----AG
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           21714 16 +     35983 T-----A--G--ATACA-----T-TGTT--------------A-----AG
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11988251 16 +  12117833 T-----A--G--ATACA-----T-TGTT--------------A-----AG
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46475004 16 +  46592721 T-----A--G--ATACA-----T-TGTT--------------A-----AG
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      32833 16 +     33420 T-----A--G--ATACA-----T-TGTT--------------A-----AG
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        2867 16 -      3443 T-----A--G--ATACA-----T-TGTT--------------A-----AG
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      3860 16 -      4669 T-----A--G--ATACA-----T-TGTT--------------A-----AG
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        3653 16 -      4411 T-----A--G--ATACA-----T-TGTT--------------A-----AG
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         3183 16 -      4205 T-----A--G--ATACA-----T-TGTT--------------A-----AG
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_1070855          1408 15 -      1715 T-----A--G--GTACA-----T-TAT---------------A-----GG
i Chaetophractus_vellerosus.ChaVel_scaffold_1070855     C 0 C 0
s Cheirogaleus_major.k141_1157592                           57028 15 -     68416 T-----A--G--ATACA-----C-TAT---------------A-----GG
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            6070 15 +     13308 T-----A--G--ATACA-----C-TAA---------------A-----GG
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             3534 16 -     18223 T-----A--G--ATACA-----C-TGTT--------------A-----AG
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             20557 16 +     25473 T-----A--G--ATACA-----C-TGTT--------------A-----AG
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           39596 16 +     57117 T-----A--G--ATACA-----C-TGTT--------------A-----AG
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          44271 16 +     54541 T-----A--G--ATACA-----C-TGTT--------------A-----AG
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15959866 20 +  43084221 T-----A--G--ATATACTGTAC-CAT---------------A-----TG
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         69086 16 +    196370 T-----A--G--ATACG-----T-TGTT--------------G-----AG
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          13266 16 +     40510 T-----A--G--ATACG-----T-TGTT--------------G-----AG
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15136467 16 -  15256731 T-----A--G--ATACA-----T-TGTT--------------A-----AG
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      31513 16 -     53260 T-----A--G--ATACA-----T-TGTT--------------A-----AG
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101141962 16 + 101219884 T-----A--G--ATACA-----T-TGTT--------------A-----AG
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                14991 15 -     21363 T-----A--G--ATACA-----C-TAA---------------A-----GG
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           760302 15 +    964067 T-----A--G--ATACA-----C-TAA---------------A-----GG
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_141308              7081 15 -     12508 T-----A--G--ATACA-----C-TAC---------------A-----GA
i Chrysochloris_asiatica.ChrAsi_scaffold_141308         C 0 C 0
s Colobus_angolensis.KN985967.1                          10880541 16 +  10971483 T-----A--G--ATACA-----T-TGTT--------------A-----AG
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147661699 16 + 156195979 T-----A--G--ATACA-----T-TGTT--------------A-----AG
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            13686 16 +     23629 T-----A--G--ATACA-----T-TGTT--------------A-----AG
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         37757 15 -     40477 T-----A--G--ATACA-----T-TAT---------------A-----AG
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 275576 13 -    399297 T-----G--T--ATG-------T-TAT---------------G-----TG
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53027106 15 +  72327488 T-----A--T--ATGCA-----T-TAT---------------G-----TG
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             18226 15 -     19186 T-----A--A--TGACA-----T-TAA---------------A-----GC
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            49921 21 -     70449 T-----A--G--ATAAA-----C-T-A--------TAAAAAAA-----AT
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  206274 15 -    956709 C-----A--C--ATAAA-----G-TAT---------------A-----GA
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 28635 20 -     67205 T-----A--G--ATATACTGTAC-TAT---------------A-----TG
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                15858 20 +     26546 T-----A--G--ATATACTATAC-TAC---------------A-----TG
i Cuniculus_paca.CunPac_flattened_line_16637            I 385 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             56956 20 -    236241 T-----A--G--ATGTACTATAC-TAT---------------A-----TA
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          180200 20 -   6883506 taTAATA--G--ATACA-----C-TAT---------------A-----GG
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16842883 15 +  31942871 T-----A--G--ATACA-----C-TAT---------------A-----GG
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80035378 15 -  96802777 T-----A--G--ATACA-----C-TAT---------------A-----AG
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18697349 15 -  18957592 C-----A--G--ACCTA-----C-TAT---------------A-----AG
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 321056 15 +    993696 t-----a--g--aTACA-----C-TGT---------------A-----AG
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   1707 15 +    151128 T-----A--G--ATACA-----C-TGT---------------A-----AG
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   155749 20 +    228994 T-----A--G--ATATACTGTAC-CAT---------------G-----TG
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3653491 15 +   4240102 T-----A--G--ATACA-----T-CCT---------------T-----GG
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 25055 15 +     28912 T-----A--G--ATACA-----T-CCT---------------T-----GG
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                34217 20 -     73477 T-----A--G--ATATACTATAC-TCT---------------G-----TG
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22993093 12 -  44670279 ------------NNNNN-----N-NNN---------------N-----NN
i Echinops_telfairi.JH980316.1                          I 2 C 0
s Eidolon_helvum.KE772537.1                                 10725 15 +     24177 t-----a--g--aTACG-----C-TAT---------------A-----AG
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1490041 15 +   1727528 T-----A--G--ATACA-----C-TGT---------------A-----AG
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7804784 15 +  15467074 T-----A--G--GCACA-----C-TAC---------------A-----CA
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        237764 15 -    369425 t-----a--t--atgta-----t-tat---------------t-----tg
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           4777 17 -      7838 t-----a--tatatata-----t-tat---------------t-----tg
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85869697 20 +  99434291 T-----A--G--ATAAA-----C-TAT----------AAAAAA-----AG
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4702302 15 +   6522550 T-----A--G--ACACA-----C-TAA---------------A-----TG
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5851478 15 -   7175178 T-----A--G--ATACA-----C-TAT---------------A-----AG
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13349981 15 +  41866177 T-----A--G--ATACA-----C-TAT---------------A-----AG
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          11471 15 +     92910 T-----A--G--ATACA-----C-TAT---------------A-----AG
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11531003 16 +  16010500 T-----G--C--ACATA-----CAGAT---------------A-----AA
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48768645 16 -  48907691 T-----A--G--ATACA-----T-TGTT--------------A-----AG
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          313579 15 +    330699 T-----A--G--ATACA-----C-TAT---------------A-----AG
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             60010 15 +     89355 T-----A--G--ATACA-----C-TAT---------------A-----AG
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              3074 15 +     13586 T-----A--G--ATACA-----C-TAT---------------A-----GA
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               3009 15 -      6809 T-----A--G--ATACA-----C-TAT---------------A-----GA
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             9484 15 +     36558 T-----A--G--ATACA-----C-TAT---------------A-----GA
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             5799 15 +     60246 T-----A--A--ATACA-----C-TAT---------------A-----GA
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 9282 15 +    109717 T-----A--G--ATACA-----C-TAT---------------A-----GA
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               13661 15 +     16540 T-----A--A--ATACA-----C-TAT---------------A-----GA
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                13937 15 +     27497 T-----A--G--ATACA-----C-TAC---------------A-----GA
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           16403 15 +     26808 T-----A--G--ATACA-----C-TAT---------------A-----GA
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                31127 15 +     46535 T-----A--G--ATACA-----C-TAT---------------A-----GA
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              13850 15 -     29447 T-----A--G--ATACA-----C-TAT---------------A-----GA
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129890884 20 - 159252932 t-----a--g--ataaa-----c-ta--taaaaa--------a-----ac
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129277955 21 - 158578461 t-----a--g--ataaa-----c-ta--taaaaaa-------a-----ac
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 19094 17 +     52776 -------------TAAA-----C-TA---------TAAAAAAA-----AC
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13890813 20 -  19261668 T-----A--G--ATATATTGTAC-TAT---------------C-----TG
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     208984 15 -    847004 C-----A--T--CTACA-----C-TAC---------------A-----GG
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           11365 15 -     43889 C-----A--T--CTACA-----C-TAC---------------A-----GG
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           8429 15 +     27357 C-----A--T--CTACA-----C-TAT---------------A-----GG
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               154339 15 +    324696 T-----A--A--GCACA-----C-TAT---------------A-----GG
i Galeopterus_variegatus.GalVar_scaffold_354            I 3 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    179556 15 -    189561 t-----a--a--aTACA-----C-TGT---------------A-----Ag
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 I 285
s Glis_glis.GliGli_scaffold_79770                           10754 15 -     18683 T-----A--G--ATATA-----C-TAT---------------A-----GG
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               3229 16 -     14630 T-----A--G--ATACA-----C-TGTT--------------A-----AG
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119650328 16 - 195582420 T-----A--G--ATACA-----C-TGTT--------------A-----AG
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   75501 15 +    118900 T-----A--A--ATACA-----C-TAT---------------A-----GT
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                         3634 15 +      3980 T-----A--G--ATACA-----C-TAT---------------A-----GA
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             26110 15 +     26611 T-----A--G--ATACA-----C-TAT---------------A-----GA
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             3570 15 +     56096 T-----A--G--ATACA-----C-TAT---------------A-----GA
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        26847 15 -     42470 T-----A--G--ATATA-----C-TAT---------------A-----GA
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        43441 15 -     54384 T-----A--G--ATACA-----C-TAT---------------A-----GA
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              15130 23 +     53719 T-----A--G--ATAAA-----C-TTA-------AAAAAAAAA-----AC
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                26040 15 -     91191 T-----A--G--ATACA-----C-TAT---------------A-----AG
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2549199 20 +  31725842 T-----A--G--ATATACTGTAC-TGT---------------A-----TG
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               54601 15 +     73687 T-----A--G--ATAGA-----C-TAT---------------G-----GG
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 I 1
s Hippopotamus_amphibius.HipAmp_scaffold_1308              145611 15 +    277961 T-----A--G--ATATA-----C-TAT---------------A-----AG
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      276959  6 -    477199 T-----A--G--ATA-----------------------------------
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              6119  6 -      9143 T-----A--G--ATG-----------------------------------
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg649                                    99909 16 +    115816 T-----G--G--ATACA-----T-TGTT--------------A-----AG
i Hoolock_leuconedys.ctg649                                C 0 I 77
s Hyaena_hyaena.HyaHya_flattened_line_20729                 14185 22 -     67322 T-----A--G--ATAAA-----C-TAT--------TTAAAAAA-----AC
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           17119 20 -    119109 T-----A--G--ATATACTATAC-CGT---------------G-----TG
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              3049 16 +      5897 T-----G--G--ATACA-----T-TGTT--------------A-----AG
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_1485652                              1470 16 -      1697 T-----G--G--ATACA-----T-TGTT--------------A-----AG
i Hylobates_agilis.k141_1485652                         C 0 C 0
s Hylobates_klossii.k141_466549                              9494 16 +     11537 T-----G--G--ATACA-----T-TGTT--------------A-----AG
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14622595 16 -  25970782 T-----G--G--ATACA-----T-TGTT--------------A-----AG
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1133650                            2484 16 -      2775 T-----G--G--ATACA-----T-TGTT--------------A-----AG
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             31982 16 -     60944 T-----G--G--ATACA-----T-TGTT--------------A-----AG
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     4246 20 +     22540 T-----A--G--ATATACTGTAC-TAT---------------A-----GG
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7124119 15 +  13083262 T-----A--G--ATACA-----C-TAT---------------T-----GG
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_1884019                                   1314 15 -      2196 T-----A--G--ATACA-----C-TAC---------------A-----GG
i Indri_indri.k141_1884019                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               7366 15 +     17520 T-----A--G--ATACA-----C-TAT---------------A-----AG
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8563648 15 +  11848649 T-----A--G--ATACA-----C-TAT---------------T-----AG
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               22191 15 +     37189 T-----A--G--ATACA-----C-TAT---------------A-----AG
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          48092 16 -    147782 T-----A--G--ATACA-----T-TGTT--------------A-----AG
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   112095 15 -    115756 T-----A--G--ACACA-----T-GAA---------------A-----TG
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258405130 15 - 285822530 T-----A--G--ATACA-----C-TAA---------------A-----GA
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        21999 15 +     39228 T-----A--G--ATATA-----C-TAT---------------A-----GG
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            51374 15 +     63517 T-----A--G--ATATA-----C-TAT---------------A-----GG
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        76617 15 +    116806 T-----A--G--ATATA-----C-TAT---------------A-----GG
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     29638 15 -     33031 T-----A--G--ATATA-----T-TAT---------------A-----GG
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3083909 29 -   3498232 T-----A--g--acaaa-----c-tgt-aaaaaaaaaaaaaaa-----ag
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    11105 15 +     22452 T-----A--G--ATACA-----T-TAT---------------A-----GG
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            134526 15 +   3060487 T-----A--G--ATACA-----C-TAT---------------A-----AG
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19245728 16 +  19376315 T-----A--G--ATACA-----T-TGTT--------------A-----AG
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            8729 15 +     84689 C-----A--T--ATACA-----C-TAT---------------A-----GG
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3776480 15 +   6799190 C-----A--T--ATACA-----C-TAT---------------A-----GG
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20589398 15 -  62548349 T-----A--G--ATACA-----C-TAT---------------G-----GG
i Loxodonta_africana.GL010040.1                         C 0 I 1
s Lycaon_pictus.CM007556.1                               11085269 21 +  39895028 T-----A--G--GTAAA-----C-TAT---------AAAAAGA-----AG
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             17412 16 +     74745 T-----A--G--ATACA-----T-TGTT--------------A-----AG
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12703918 16 +  12821369 T-----A--C--ATACA-----T-TGTT--------------A-----AG
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               6014 16 +      6569 T-----A--G--ATACA-----T-TGTT--------------A-----AG
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           44316 16 +     63263 T-----A--G--ATACA-----T-TGTT--------------A-----AG
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_925451                                  324 16 +     10231 T-----A--G--ATAGA-----T-TGTT--------------A-----AG
i Macaca_fuscata.k119_925451                            C 0 C 0
s Macaca_leonina.k141_3421209                                2465 16 +      3017 T-----A--G--ATACA-----T-TGTT--------------A-----AG
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_mulatta.NC_041755.1                            196032995 16 + 196197964 T-----A--G--ATACA-----T-TGTT--------------A-----AG
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11443101 16 +  11645122 T-----A--G--ATACA-----T-TGTT--------------A-----AG
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_radiata.k141_1580474                                2857 16 -      3617 T-----A--G--ATACA-----T-TGTT--------------A-----AG
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 13187 16 -     55006 T-----A--G--ATACA-----T-TGTT--------------A-----AG
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43838224 16 +  43892939 T-----A--G--ATACA-----T-TGTT--------------A-----AG
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                5446 16 -      5978 T-----A--G--ATACA-----T-TGTT--------------A-----AG
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                700141 15 +    802869 T-----A--G--ATACA-----C-TAT---------------A-----AG
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43434888 16 -  43563597 T-----A--G--ATACA-----T-TGTT--------------A-----AG
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4447714 16 -   4543643 T-----A--G--ATACA-----T-TGTT--------------A-----AG
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            144633 15 +    252755 T-----A--G--GTACA-----C-TAT---------------A-----AA
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             34707 15 +     58827 T-----A--G--GTACA-----C-TAT---------------A-----AA
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36871954 15 +  64221397 T-----A--G--ATACA-----C-TAT---------------T-----GG
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       62801 15 -    234502 T-----A--G--TTACA-----C-TAT---------------A-----AG
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_146202             507 21 -      1999 T-----A--G--ATACA-----C-TAT---------AAAAAAA-----AC
i Mellivora_capensis.MelCap_flattened_line_146202       C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               10060 15 +     15977 T-----G--T--ACATA-----T-CAC---------------A-----TG
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1044845 15 -  26018355 T-----A--T--ATGGA-----T-TAT---------------G-----TG
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Microcebus_murinus.CM007691.1                          16508250 15 +  47401472 T-----A--G--ATACA-----C-TAT---------------A-----GG
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  29518 12 -     48017 ------------CTAGA-----T-CAT---------------A-----GG
i Microgale_talazaci.MicTal_scaffold_34660              I 2 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               21216 20 -     32043 T-----A--G--ACAAA-----G-AAT---------------AACTGGAG
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22817964 17 -  98408828 t-----attt--atata-----t-tat---------------t-----tg
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8207971 15 +  10048721 C-----A--G--ACACA-----C-TAC---------------A-----AG
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            32643 15 +     45743 C-----A--G--ACACA-----C-TAC---------------A-----AG
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        33545 16 +     34273 T-----A--G--ATACA-----T-TGTT--------------A-----AG
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         9215 29 -    104932 T-----A--G--ACAAA-----C-TGT-AAAAAAAAAAAAAAA-----AG
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     3651 15 +      8497 T-----A--G--ATACA-----C-TAT---------------A-----GG
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 144961 15 +    154973 G-----A--G--ATACA-----C-TAT---------------A-----AG
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                159727 15 +    265003 T-----G--G--ACACT-----C-TAT---------------A-----AA
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 3143 15 -      4346 T-----A--G--ATACA-----C-TGT---------------A-----AG
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  142823 22 -    168139 T-----A--G--ATAAA-----C-TTA--------AAAAAAAA-----AC
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          17608 15 -    100666 T-----A--G--ATACA-----C-TAC---------------A-----AC
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70764474 15 +  92629107 t-----a--t--ataca-----t-tct---------------a-----tg
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75487516 15 +  98207768 T-----A--T--ATACA-----t-cat---------------a-----ta
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67553688 15 +  89017189 t-----a--t--ataca-----t-tat---------------a-----tg
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74328698 15 +  97876770 t-----a--t--ataca-----t-tat---------------a-----tg
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              9238 15 +     98495 T-----A--G--ATGCA-----C-CAT---------------A-----GG
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4422079 21 -  28371801 T-----a--g--ataaa-----c-tat-aaaaaa--------a-----aa
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     88165 20 -    117718 T-----A--G--ATATTCTGTAC-CAT---------------A-----TG
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               965931 15 +   8389877 T-----A--G--ACACA-----C-TAT---------------A-----AG
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5017621 15 +   6462685 T-----A--G--ACACA-----C-TAC---------------A-----AG
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3463518 15 -   3747815 T-----A--G--ACACA-----C-TAC---------------A-----AG
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         8712 15 +     66751 T-----A--G--ACACA-----C-TAC---------------A-----AG
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3585  8 -      8794 T-----A--G--GTACA---------------------------------
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 I 6
s Nannospalax_galili.KL201303.1                            108574 13 +    362372 T-----A--C--ATA-------C-TAT---------------A-----TG
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               5925 16 +     48152 T-----A--G--ATATA-----T-TGTT--------------A-----AG
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4482814 24 -  14209539 T-----A--g--acaaa-----c-tgt-aaaaaaaaa-----a-----ag
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3949574 15 -   4490290 T-----A--G--ATACA-----C-TAT---------------A-----AG
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  47842 15 +     94413 T-----A--G--ACACA-----G-TAT---------------A-----AG
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1439838                            797 16 +      3718 T-----G--G--ATACG-----T-TGTT--------------A-----AG
i Nomascus_annamensis.k141_1439838                      C 0 C 0
s Nomascus_concolor.k141_49591                               1020 16 +      2014 T-----G--G--ATACG-----T-TGTT--------------A-----AG
i Nomascus_concolor.k141_49591                          C 0 C 0
s Nomascus_gabriellae.k141_906566                            2348 16 -      2544 T-----G--G--ATACG-----T-TGTT--------------A-----AT
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             22824 16 -  18771707 T-----G--G--ATACG-----T-TGTT--------------A-----AG
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                   573 16 +      4512 T-----G--G--ATACG-----T-TGTT--------------A-----AG
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                28262 21 +   3668941 T-----A--g--gtaaa-----c-tat-aaaaaa--------a-----ag
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            29989815 15 +  95554990 C-----A--T--ATACA-----C-TAT---------------A-----GG
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            4546 15 -      6470 C-----A--T--ATACA-----C-TAT---------------A-----GG
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      23745006 15 -  89412551 C-----A--T--ATACA-----C-TAT---------------A-----GG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4994069 15 -  23139505 c-----a--g--ataCC-----C-TAT---------------T-----GG
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3683657 20 +  10294119 T-----A--G--ATATACTGTAC-TAT---------------A-----TG
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             677460 26 -   3126709 T-----A--g--acaaa-----c-tgt-aaaaaaaaaa---ga-----ag
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1078271 15 +   1425656 T-----A--G--ATACA-----C-TGT---------------G-----AG
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         35424 15 +     78940 t-----a--g--aTACA-----C-TGT---------------A-----AG
i Okapia_johnstoni.LVCL01S0017931.1                     I 6 I 142
s Ondatra_zibethicus.OndZib_scaffold_6821                  123238 15 +    145789 T-----T--T--ATATA-----T-TAT---------------T-----TG
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  34993 15 +     62360 T-----A--T--AAGCA-----T-TAT---------------A-----TG
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7223258 15 -   7562323 T-----A--G--ATATA-----C-TAT---------------A-----AG
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              41639 15 -     66828 T-----T--G--GTACA-----C-TAT---------------A-----GA
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141873764 15 + 163896628 T-----A--G--ATACA-----T-TAT---------------A-----GG
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      305601 20 -    505867 T-----A--G--GTAAA-----C-TAT----------AAAAAA-----AG
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       37072 15 +     38679 C-----A--T--CTACA-----C-TAC---------------A-----GG
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18006514 15 -  38779656 C-----A--T--CTACA-----C-TAC---------------a-----gg
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134075833 15 - 275406953 T-----A--G--ATACA-----C-TGT---------------A-----AG
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      77047 15 +    140051 T-----A--G--ATACA-----C-TGT---------------A-----AG
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127572573 16 - 205426864 T-----A--G--ATACA-----T-TGTT--------------A-----AG
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120149726 16 - 196562556 T-----A--G--ATACA-----T-TGTT--------------A-----AG
i Pan_troglodytes.CM009241.2                            I 16 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  32285 20 +    295523 T-----A--G--ATAAA-----C-TA----------TAAAAAA-----AC
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3636019 20 +  18214204 t-----a--g--ataaa-----c-ta--taaaaa--------a-----ac
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5025666 20 -   6340057 t-----a--g--ataaa-----c-ta--taaaaa--------a-----aa
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1064694 15 -   1292953 t-----a--G--ACACA-----C-TGT---------------A-----AG
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188153672 16 - 188283584 T-----A--G--ATACA-----C-TGTT--------------A-----AG
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            49884 16 +     76494 T-----A--G--ATACA-----T-TGTT--------------A-----AG
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47511069 16 +  47705337 T-----A--G--ATACA-----C-TGTT--------------A-----AG
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 65046 16 -    104429 T-----A--G--ATACA-----T-TGTT--------------A-----AG
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  14837 16 -     29451 T-----A--G--ATACA-----C-TGTT--------------A-----AG
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                35240 16 +     35859 T-----A--G--ATACA-----T-TGTT--------------A-----AG
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113585 21 -    135482 T-----A--G--ATAAA-----A-TAT--------TTTAAAAA-----A-
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           3122 15 -     23713 C-----A--T--ATACA-----C-TAT---------------A-----GG
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            22421 15 -     27972 C-----A--T--ATACA-----C-TAC---------------A-----GG
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      41036 15 -     45160 T-----A--G--ATATA-----C-TAT---------------T-----GG
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4948170 15 -   8017169 T-----A--T--AAGCA-----T-TAT---------------G-----TG
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    10350 20 -     36578 T-----A--G--ATATGGTATAC-TTT---------------A-----TG
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            119875 15 -    122454 T-----A--G--ATACA-----C-TAT---------------A-----AG
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           2930 16 -      3310 T-----A--G--ATACA-----T-TGTT--------------A-----AG
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       22835 16 -     82327 T-----A--G--ATACA-----T-TGTT--------------A-----AG
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           19582 16 +     19957 T-----A--G--ATACA-----T-TGTT--------------A-----AG
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26737596 16 +  26888534 T-----A--G--ATACA-----T-TGTT--------------A-----AG
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            95381 15 +    112873 T-----A--G--ACACA-----C-TAC---------------A-----TG
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             41573 16 -     61926 T-----A--G--ATACG-----T-TGTT--------------A-----AG
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        23002 16 +     78826 T-----A--G--ATACG-----T-TGTT--------------A-----AG
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              6953 16 -     15800 T-----A--G--ATACG-----T-TGTT--------------A-----AG
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        10151 16 -     16101 T-----A--G--ATACG-----T-TGTT--------------A-----AG
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          3460 16 +      9673 T-----A--G--ATACG-----T-TGTT--------------A-----AG
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13472454 16 -  19735023 T-----A--G--ATACG-----T-TGTT--------------A-----AG
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           11362 16 -     31692 T-----A--G--ATACG-----T-TGTT--------------A-----AG
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           3941 15 +     21690 T-----A--G--ATACA-----C-TAT---------------A-----AG
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       20798 16 +     44506 T-----A--G--ATACA-----T-TGTT--------------A-----AG
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        21008 16 +     67491 T-----A--G--ATACA-----T-TGTT--------------A-----AG
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      11249 16 -     98129 T-----A--G--ATACA-----T-TGTT--------------A-----AG
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     20854 16 +    147771 T-----A--G--ATACA-----T-TGTT--------------A-----AG
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        21104 16 -     23762 T-----A--G--ATACA-----T-TGTT--------------A-----AG
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          1570 16 -     55515 T-----A--G--ATACA-----T-TGTT--------------A-----AG
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         20923 16 +    152463 T-----A--G--ATACA-----T-TGTT--------------A-----AG
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      7683 16 +      8943 T-----A--G--ATACA-----T-TGTT--------------A-----AG
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                         10643 16 +    134592 T-----A--G--ATACA-----T-TGTT--------------A-----AG
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          21233 16 -     75465 T-----A--G--ATACA-----T-TGTT--------------A-----AG
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              185121 16 -    373494 T-----A--G--ATACA-----T-TGTT--------------A-----AG
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19805029 16 +  19899266 T-----A--G--ATACA-----T-TGTT--------------A-----AG
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               3165 16 -     15069 T-----A--G--ATATA-----T-TGTT--------------A-----AG
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              3299 16 +     14865 T-----A--G--ATATA-----T-TGTT--------------A-----AG
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                74468 15 +     78963 T-----A--G--ATAGA-----C-TAT---------------G-----GG
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 I 1
s Prolemur_simus.MPIZ01000048.1                           6846506 15 +  12164890 T-----A--G--ATACA-----C-TAT---------------A-----GA
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    665123 15 -   2312742 N-----N--N--NNNNN-----N-NNN---------------N-----NN
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         1648 15 +     11805 T-----A--G--ATACA-----C-TAT---------------A-----GG
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           40983 15 +     52369 T-----A--G--ATACA-----C-TAT---------------A-----GG
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         33372 15 -     44753 T-----A--G--ATACA-----C-TAT---------------A-----GG
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            15293 15 +     27322 T-----A--G--ATACA-----C-TAT---------------A-----GG
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       14932 15 -     53241 T-----A--G--ATACA-----C-TAT---------------A-----GG
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         37203 15 -     48185 T-----A--G--ATACA-----C-TAT---------------A-----GG
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           31600 15 +     77221 t-----g--t--acatA-----T-TAC---------------A-----TG
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            2396 15 -     27784 T-----A--G--ACACA-----C-TAT---------------A-----AG
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        244174 20 -    344369 T-----A--G--ATAAA-----C-TAT----------TAAAAA-----AG
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13244526 15 -  17261082 t-----a--g--atACA-----T-TAT---------------A-----AG
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             602476 15 -   3946241 t-----a--g--atACA-----T-TAT---------------A-----AG
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131532248 21 - 161321710 t-----a--g--ataaa-----c-ta--taaaaaa-------a-----ac
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             27294 16 +     56732 T-----A--G--ATATA-----T-TGCT--------------A-----AG
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6803785 16 +   6970761 T-----A--G--ATATA-----T-TGTT--------------A-----AG
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             3178 16 +     18040 T-----A--G--ATATA-----T-TGTT--------------A-----AG
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                14349 15 +     68503 T-----A--G--ATACA-----C-TGT---------------A-----AG
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13913572 15 +  90463843 T-----A--T--ATAAA-----T-TAC---------------a-----tg
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1786339 15 +   2252614 T-----A--G--ATATA-----C-TAT---------------A-----AG
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           13731 16 -     14454 T-----A--G--ATATA-----T-TGTT--------------A-----AG
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206375057 16 - 206558726 T-----A--G--ATATA-----T-TGTT--------------A-----AG
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44853957 16 -  45163003 T-----A--G--ATATA-----T-TGTT--------------A-----AG
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                17816 15 +    109198 C-----A--G--ATACA-----T-TAT---------------A-----AG
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       6155 10 +     12214 --------------ACA-----C-TGT---------------A-----AG
i Saiga_tatarica.SaiTat_scaffold_82192                  I 1 C 0
s Saimiri_boliviensis.NW_024100938.1                     15670678 16 -  43202129 t-----a--g--aTACA-----C-TATT--------------A-----AG
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        2544 16 +     34089 T-----A--G--ATACA-----C-TATT--------------A-----AG
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              2485 16 -     60842 T-----A--G--ATACA-----C-TATT--------------A-----AG
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              2580 16 +     67014 T-----A--G--ATACA-----C-TATT--------------A-----AG
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              2558 16 +     60816 T-----A--G--ATACA-----C-TATT--------------A-----AG
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 2495 16 -     76454 T-----A--G--ATACA-----C-TATT--------------A-----AG
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17339245 16 -  30362882 T-----A--G--ATACA-----C-TGGT--------------A-----AG
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         18620 16 -     62485 T-----A--G--ATACA-----C-TGGT--------------A-----AG
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   29901 14 -    114521 C-----A--T--ATATA-----C--TT---------------A-----AG
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1527475                       25719 16 +     26421 T-----A--G--ATATA-----T-TGTT--------------C-----AG
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       6179 16 +     20762 T-----A--G--ATATA-----T-TGTT--------------C-----AG
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         39914 16 +     40653 T-----A--G--ATATA-----T-TGTT--------------C-----AG
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                           10471 16 -     12194 T-----A--G--ATATA-----T-TGTT--------------C-----AG
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     23893 16 -     27512 T-----A--G--ATATA-----T-TGTT--------------C-----AG
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         32912 16 -     33692 T-----A--G--ATATA-----T-TGTT--------------C-----AG
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   97770 15 -    120886 T-----A--T--ATACA-----T-TAT---------------A-----TG
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            16539 15 +    739146 C-----A--G--ATATA-----T-GAT---------------A-----AG
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17748755 15 -  27805282 N-----N--N--NNNNN-----N-NNN---------------N-----NN
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2238035 15 +   2842873 T-----A--G--ATACA-----C-TAT---------------T-----GG
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             232931 20 -    276980 T-----A--G--ATAAA-----C-T-T---------AAAAAAA-----AT
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            25490 22 +     62062 T-----A--G--ATAAA-----C-TTA--------AAAAAAAA-----AC
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189270400 15 + 218635234 T-----A--T--ACACA-----C-TAA---------------A-----AG
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        12847 16 -  13920577 T-----G--G--ATACA-----T-TGTT--------------A-----AG
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               4338 15 -      6213 T-----A--G--ACAAA-----C-TAC---------------A-----AG
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               13261  8 +     45698 T-----A--G--GTACG---------------------------------
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 I 6
s Tapirus_indicus.TapInd_scaffold_176                      805266 15 +   1148477 T-----A--G--ATACA-----C-TGT---------------A-----AG
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  55926 15 +     99546 T-----A--G--ATACA-----C-TGT---------------A-----AG
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               24566 15 +     42269 T-----A--G--ATATA-----T-TGC---------------A-----AG
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               57882 15 +     65473 T-----A--G--ATATA-----T-TGC---------------A-----AG
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194005208 16 - 194193292 T-----A--G--ATACA-----T-TGTT--------------A-----AG
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             37411 20 -     47444 T-----A--G--ATATGCTGTAC-TCT---------------A-----TG
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  2136 15 +      6782 T-----A--G--ATACA-----C-TAT---------------A-----GG
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  134405 15 -    259118 T-----A--G--ACATA-----C-TAT---------------A-----AG
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        24289 16 +     38948 T-----A--G--ATATA-----T-TGTT--------------C-----AG
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   18016 16 -     32910 T-----A--G--ATATA-----T-TGTT--------------C-----AG
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       23914 16 +     24652 T-----A--G--ATATA-----T-TGTT--------------C-----AG
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      2792 16 -      3559 T-----A--G--ATATA-----T-TGTT--------------C-----AG
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           40737 15 -     54611 T-----A--G--AT-TA-----T-TGTT--------------C-----AG
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       16737 16 +     17312 T-----A--G--ATATA-----T-TGTT--------------C-----AG
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    24100 16 -     25040 T-----A--G--ATATA-----T-TGTT--------------C-----AG
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          2761 16 +      3528 T-----A--G--ATATA-----T-TGTT--------------C-----AG
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  49128 16 +     51589 T-----A--G--ATATA-----T-TGTT--------------C-----AG
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       12304 16 +     14732 T-----A--G--ATATA-----T-TGTT--------------C-----AG
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       2781 16 -     28054 T-----A--G--ATATA-----T-TGTT--------------C-----AG
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44657576 16 -  44834318 T-----A--G--ATATA-----T-TGTT--------------C-----AG
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        2586 15 +      3372 T-----A--G--AT-TA-----T-TGTT--------------C-----AG
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   3748 15 +     90398 T-----A--G--ATATA-----C-TAT---------------A-----AG
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16079848 15 +  31416278 T-----A--G--ATTCA-----C-TAT---------------G-----GG
i Trichechus_manatus.JH594618.1                         C 0 I 1
s Tupaia_chinensis.KB320831.1                             2790498 15 -   3938065 T-----G--C--ATATA-----C-TAT---------------A-----GG
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    3022 15 +     13056 T-----G--C--ATATA-----C-TAT---------------A-----GG
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69311975 15 -  96451834 T-----A--G--ATACA-----C-TAT---------------A-----AG
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 25100 14 -     25548 C-----A--G--ATATA-----C--TT---------------A-----AG
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6512729 26 +  28682327 T-----A--g--ataaa-----c-tat-aagaaaaaaaa---a-----ag
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  3347 15 -     20643 T-----A--G--ATACA-----C-TAT---------------A-----GG
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             22891 15 -     33872 T-----A--G--ATACA-----C-TAT---------------A-----GG
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1523208 15 -   2331223 T-----A--G--ATACA-----C-TAC---------------A-----AG
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                135670 20 -    281493 T-----A--G--GTAAA-----C-TAT----------AAAAAA-----AG
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       125132 15 -    134049 T-----A--G--ATACA-----C-TAT---------------T-----GG
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        212196 25 -    227762 T-----A--G--ACAAA-----C-TGT-----AAAAGAAAAGA-----AG
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     13363 15 -     20485 T-----A--G--ATACA-----C-TAT---------------T-----GG
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           5472 15 -      8775 T-----A--G--ATACA-----C-TAT---------------A-----AG
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Mesoplodon_bidens.MesBid_scaffold_183284                   2166 255 +      2166 T
e Condylura_cristata.JH655880.1                          60611207  0 +  78930452 C
e Macaca_tonkeana.k141_2870633                               2864 158 -     27140 T
e Macaca_nigra.k141_282495                                   2859 158 -     46448 T
e Macaca_maura.k141_251854                                  43912 158 -     79256 T

a score=0.000000
s hg38.chr4_GL000008v2_random                                9847 3 +    209709 CAA
s Acinonyx_jubatus.LLWD01000356.1                         2031928 3 +   3721120 cCA
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    110598 3 -    189883 TAA
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 I 2
s Ailuropoda_melanoleuca.LNAT01000321.1                  10655270 3 +  23371972 cca
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7091986 3 -  16596857 gca
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   10923 3 -     22067 CAA
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_3103707                  60864 3 +     61638 CAA
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        52672 3 +     53391 CAA
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         3397 3 +     72529 CAA
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          2972 3 +      3797 CAA
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             8145 3 -     18050 CAA
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  9258 3 -     11521 CAA
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              8822 3 -     21359 CAA
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_298055                                  113 3 +      1823 CAA
i Alouatta_juara.k141_298055                            C 0 C 0
s Alouatta_macconnelli.k141_1331706                          8113 3 -     10438 CAA
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            4769 3 +      7047 CAA
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             8055 3 +     10410 CAA
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            1858 3 -      4927 CAA
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             4788 3 +      6429 CAA
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3518707 3 +   4113121 CAA
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      388860 3 -    631301 CAA
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            29293 3 +     33004 CAA
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 60506 3 +     78111 CAA
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            3447 3 +     22701 CAA
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5747404 3 +   9889416 CAA
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             3989 3 -    104377 CAA
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               3995 3 +     23246 CAA
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     2002 3 +      5067 TAT
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      15944 3 +     17483 GAA
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 7256 3 -     29036 CAA
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9537239 3 +  39197703 CAA
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             58523 3 +     85812 CAA
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 9522 3 +     89302 CAA
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             14027 3 -     58268 CAA
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             62018 3 +    119057 CAA
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               3987 3 -     25888 CAA
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 4737 3 -     16375 CAA
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              1057 3 +      2719 CAA
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26378707 3 +  51448160 CAA
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        3939 3 -     13118 CAA
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   41774 3 -     72089 CAA
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6557800 3 +   6870073 CAA
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138138039 3 - 161108492 CAA
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     570413 3 -    998990 CAA
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136293772 3 - 158972876 CAA
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1229528 3 -   1914593 CAA
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               111880 3 -    171031 CAA
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 10906 3 +    125063 CAA
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                12954 3 -    216513 CAA
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        5494 3 -    134917 CAA
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3218114 3 -   8989139 CAA
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           395819 3 -  15254737 CAA
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2971552 3 +   6889770 CAA
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11516644 3 +  39901454 CCA
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   11662 3 +     87036 CCA
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11263305 3 -  35597290 CCA
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11085834 3 +  39895921 CCA
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16452858 3 -  44759192 cca
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21323783 3 + 157394656 CAA
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135705010 3 - 157403528 CAA
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_979108                   118 3 -      1248 CAA
i Capromys_pilorides.CapPil_scaffold_979108             C 0 I 9
s Carlito_syrichta.NW_007248099.1                          307098 3 +    345090 AAA
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               58052 3 +     67245 CAA
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   28538 3 +     33760 CAA
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   157343 3 -    276539 CAA
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15784722 3 -  24422027 CAA
i Cavia_aperea.AVPZ01000278.1                           C 0 I 12
s Cavia_porcellus.DS562889.1                             15796654 3 -  24440124 CAA
i Cavia_porcellus.DS562889.1                            C 0 I 12
s Cavia_tschudii.CavTsc_scaffold_488                       174845 3 +    436027 CAA
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 I 12
s Cebus_albifrons.Contig22                               18888733 3 -  29618158 CAA
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 6277 3 -     26817 CAA
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                10517 3 +     25043 CAA
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         6132 2 +     21754 -AA
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4362423 3 +   7569818 CCA
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         2175 3 -      9338 CCA
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6552656 3 +   6739814 CAA
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      54133 3 -     54931 CAA
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         19117 3 -     19697 CAA
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         56648 3 -    107033 CAA
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        3088 3 -      3853 CAA
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          27024 3 +     30494 CAA
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           3048 3 -      4022 CAA
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          2942 3 -      3505 CAA
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           21730 3 +     35983 CAA
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11988267 3 +  12117833 CAA
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46475020 3 +  46592721 CAA
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      32849 3 +     33420 CAA
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        2883 3 -      3443 CAA
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      3876 3 -      4669 CAA
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        3669 3 -      4411 CAA
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         3199 3 -      4205 CAA
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_1070855          1423 3 -      1715 CAA
i Chaetophractus_vellerosus.ChaVel_scaffold_1070855     C 0 C 0
s Cheirogaleus_major.k141_1157592                           57043 3 -     68416 CAA
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            6085 3 +     13308 CAA
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             3550 3 -     18223 CAA
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             20573 3 +     25473 CAA
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           39612 3 +     57117 CAA
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          44287 3 +     54541 CAA
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15959886 3 +  43084221 CAA
i Chinchilla_lanigera.JH721867.1                        C 0 I 9
s Chiropotes_israelita.k141_1189915                         69102 3 +    196370 CAA
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          13282 3 +     40510 CAA
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15136483 3 -  15256731 CAA
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      31529 3 -     53260 CAA
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101141978 3 + 101219884 CAA
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                15006 3 -     21363 CAA
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           760317 3 +    964067 CAA
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_141308              7096 3 -     12508 AAA
i Chrysochloris_asiatica.ChrAsi_scaffold_141308         C 0 C 0
s Colobus_angolensis.KN985967.1                          10880557 3 +  10971483 CAA
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147661715 3 + 156195979 CAA
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            13702 3 +     23629 CAA
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         37772 3 -     40477 CAA
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 275589 3 -    399297 Taa
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 I 907
s Cricetulus_griseus.LT883672.1                          53027121 3 +  72327488 TAA
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             18241 3 -     19186 CAA
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            49942 3 -     70449 CCA
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  206289 3 -    956709 CAA
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 I 13
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 28655 3 -     67205 CAA
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 I 9
s Cuniculus_paca.CunPac_flattened_line_16637                15878 3 +     26546 CAA
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 I 9
s Dasyprocta_punctata.DasPun_flattened_line_634             56976 3 -    236241 CAA
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 I 9
s Dasypus_novemcinctus.JH568778.1                          180220 3 -   6883506 CTA
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16842898 3 +  31942871 CAA
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80035393 3 -  96802777 CAA
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18697364 3 -  18957592 CAA
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 321071 3 +    993696 CCA
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   1722 3 +    151128 CCA
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   155769 3 +    228994 CAA
i Dinomys_branickii.DinBra_scaffold_1996                C 0 I 9
s Dipodomys_ordii.KN672545.1                              3653506 3 +   4240102 CAA
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 25070 3 +     28912 CAA
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                34237 3 -     73477 CAA
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 I 9
s Echinops_telfairi.JH980316.1                           22993105 3 -  44670279 NNN
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 10740 3 +     24177 CAA
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1490056 3 +   1727528 CAA
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7804799 3 +  15467074 AAA
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        237779 2 -    369425 tA-
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           4794 2 -      7838 ta-
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85869717 3 +  99434291 CCA
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4702317 3 +   6522550 CAA
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5851493 3 -   7175178 CCA
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13349996 3 +  41866177 CCA
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          11486 3 +     92910 CCA
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11531019 3 +  16010500 CAA
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48768661 3 -  48907691 CAA
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          313594 3 +    330699 CAA
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             60025 3 +     89355 CAA
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              3089 3 +     13586 CAA
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               3024 3 -      6809 CAA
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             9499 3 +     36558 CAA
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             5814 3 +     60246 CAA
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 9297 3 +    109717 CAA
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               13676 3 +     16540 CAA
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                13952 3 +     27497 CAA
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           16418 3 +     26808 CAA
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                31142 3 +     46535 CAA
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              13865 3 -     29447 CAA
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129890904 3 - 159252932 CCA
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129277976 3 - 158578461 cca
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 19111 3 +     52776 CCA
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13890833 3 -  19261668 CAA
i Fukomys_damarensis.KN123630.1                         C 0 I 15
s Galago_moholi.ctg555                                     208999 3 -    847004 CAA
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           11380 3 -     43889 CAA
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           8444 3 +     27357 CAA
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               154354 3 +    324696 CAA
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    179856 3 -    189561 caa
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 285 C 0
s Glis_glis.GliGli_scaffold_79770                           10769 3 -     18683 CAA
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               3245 3 -     14630 CAA
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119650344 3 - 195582420 CAA
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   75516 3 +    118900 CAA
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                         3649 3 +      3980 CAA
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             26125 3 +     26611 CAA
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             3585 3 +     56096 CAA
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        26862 3 -     42470 CAA
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        43456 3 -     54384 CAA
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              15153 3 +     53719 CCA
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                26055 3 -     91191 CAA
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2549219 3 +  31725842 CAA
i Heterocephalus_glaber.JH602058.1                      C 0 I 9
s Heterohyrax_brucei.HetBruBak_scaffold_25354               54617 3 +     73687 AAA
i Heterohyrax_brucei.HetBruBak_scaffold_25354           I 1 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              145626 3 +    277961 CAA
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hoolock_leuconedys.ctg79                                      2504 3 -   7690867 CAA
i Hoolock_leuconedys.ctg79                                 I 30 I 48
s Hyaena_hyaena.HyaHya_flattened_line_20729                 14207 3 -     67322 ACA
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           17139 3 -    119109 CAA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 I 9
s Hylobates_abbotti.k141_493872                              3065 3 +      5897 CAA
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_1485652                              1486 3 -      1697 CAA
i Hylobates_agilis.k141_1485652                         C 0 C 0
s Hylobates_klossii.k141_466549                              9510 3 +     11537 CAA
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14622611 3 -  25970782 CAA
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1133650                            2500 3 -      2775 CAA
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             31998 3 -     60944 CAA
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     4266 3 +     22540 CAA
i Hystrix_cristata.HysCri_scaffold_50788                C 0 I 9
s Ictidomys_tridecemlineatus.JH393315.1                   7124134 3 +  13083262 CAA
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_1884019                                   1329 3 -      2196 CAA
i Indri_indri.k141_1884019                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               7381 3 +     17520 CAA
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8563663 3 +  11848649 CAA
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               22206 3 +     37189 CAA
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          48108 3 -    147782 CAA
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   112110 3 -    115756 CAA
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258405145 3 - 285822530 CAA
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        22014 3 +     39228 CAA
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            51389 3 +     63517 CAA
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        76632 3 +    116806 CAA
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     29653 3 -     33031 CAA
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3083938 3 -   3498232 cca
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    11120 3 +     22452 CAA
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            134541 3 +   3060487 CAA
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19245744 3 +  19376315 CAA
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            8744 3 +     84689 CAA
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3776495 3 +   6799190 CAA
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20589414 3 -  62548349 AAA
i Loxodonta_africana.GL010040.1                         I 1 C 0
s Lycaon_pictus.CM007556.1                               11085290 3 +  39895028 CCA
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             17428 3 +     74745 CAA
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12703934 3 +  12821369 CAA
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               6030 3 +      6569 CAA
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           44332 3 +     63263 CAA
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_925451                                  340 3 +     10231 CAA
i Macaca_fuscata.k119_925451                            C 0 C 0
s Macaca_leonina.k141_3421209                                2481 3 +      3017 CAA
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_mulatta.NC_041755.1                            196033011 3 + 196197964 CAA
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11443117 3 +  11645122 CAA
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_radiata.k141_1580474                                2873 3 -      3617 CAA
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 13203 3 -     55006 CAA
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43838240 3 +  43892939 CAA
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                5462 3 -      5978 CAA
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                700156 3 +    802869 CAA
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43434904 3 -  43563597 CAA
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4447730 3 -   4543643 CAA
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            144648 3 +    252755 CCA
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             34722 3 +     58827 CCA
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36871969 3 +  64221397 CAA
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       62816 3 -    234502 CAA
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_146202             528 3 -      1999 CCA
i Mellivora_capensis.MelCap_flattened_line_146202       C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               10075 3 +     15977 TAA
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1044860 3 -  26018355 TAA
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Microcebus_murinus.CM007691.1                          16508265 3 +  47401472 CAA
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  29530 3 -     48017 CAA
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               21236 3 -     32043 CAA
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22817981 2 -  98408828 ta-
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8207986 3 +  10048721 CAA
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            32658 3 +     45743 CAA
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        33561 3 +     34273 CAA
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         9244 3 -    104932 CCA
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     3666 3 +      8497 CAA
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 144976 3 +    154973 CAA
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                159742 3 +    265003 GAA
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 3158 3 -      4346 CAA
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  142845 2 -    168139 -CA
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          17623 3 -    100666 CAA
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70764489 3 +  92629107 gaa
i Mus_caroli.LT608236.1                                 C 0 I 5
s Mus_musculus.chr16                                     75487531 3 +  98207768 gaa
i Mus_musculus.chr16                                    C 0 I 5
s Mus_pahari.LT608305.1                                  67553703 3 +  89017189 taa
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74328713 3 +  97876770 gaa
i Mus_spretus.CM004110.1                                C 0 I 5
s Muscardinus_avellanarius.MusAve_scaffold_9643              9253 3 +     98495 CAA
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4422100 3 -  28371801 cca
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     88185 3 -    117718 CAA
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 I 9
s Myotis_brandtii.KE161952.1                               965946 3 +   8389877 CAA
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5017636 3 +   6462685 TAA
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3463533 3 -   3747815 CAA
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         8727 3 +     66751 TAA
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3599 3 -      8794 CAA
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        I 6 C 0
s Nannospalax_galili.KL201303.1                            108587 3 +    362372 CAA
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               5941 2 +     48152 C-A
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4482838 3 -  14209539 cca
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3949589 3 -   4490290 CAA
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  47857 3 +     94413 CAA
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 I 3
s Nomascus_annamensis.k141_1439838                            813 3 +      3718 CAA
i Nomascus_annamensis.k141_1439838                      C 0 C 0
s Nomascus_concolor.k141_49591                               1036 3 +      2014 CAA
i Nomascus_concolor.k141_49591                          C 0 C 0
s Nomascus_gabriellae.k141_906566                            2364 3 -      2544 CAA
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             22840 3 -  18771707 CAA
i Nomascus_siki_b.tarseq_80                         C 0 I 30
s Nomascus_siki_a.k141_595747                                   589 3 +      4512 CAA
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                28283 3 +   3668941 cca
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            29989830 3 +  95554990 CAA
i Nycticebus_bengalensis.LG16                           C 0 n 0
s Nycticebus_coucang.k141_2051882                            4561 3 -      6470 CAA
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      23745021 3 -  89412551 CAA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 n 0
s Ochotona_princeps.JH802095.1                            4994084 3 -  23139505 CCA
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3683677 3 +  10294119 CAA
i Octodon_degus.JH651621.1                              C 0 I 9
s Odobenus_rosmarus.KB229369.1                             677486 3 -   3126709 cca
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1078286 3 +   1425656 CAA
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         35581 3 +     78940 caA
i Okapia_johnstoni.LVCL01S0017931.1                     I 142 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  123253 2 +    145789 TA-
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  35008 3 +     62360 TAA
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7223273 3 -   7562323 CAA
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              41654 3 -     66828 CAA
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141873779 3 + 163896628 CAA
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      305621 3 -    505867 CCA
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       37087 3 +     38679 CAA
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18006529 3 -  38779656 caa
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134075848 3 - 275406953 CAA
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      77062 3 +    140051 CAA
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127572589 3 - 205426864 CAA
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120149742 3 - 196562556 CAA
i Pan_troglodytes.CM009241.2                            C 0 I 50
s Panthera_onca.PanOnc_flattened_line_1615                  32305 3 +    295523 CCA
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3636039 3 +  18214204 cCA
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5025686 3 -   6340057 cca
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1064709 3 -   1292953 CAA
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188153688 3 - 188283584 CAA
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            49900 3 +     76494 CAA
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47511085 3 +  47705337 CAA
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 65062 3 -    104429 CAA
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  14853 3 -     29451 CAA
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                35256 3 +     35859 CAA
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113606 2 -    135482 -CA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           3137 3 -     23713 GAA
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            22436 3 -     27972 GAA
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      41051 3 -     45160 CAA
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4948185 3 -   8017169 TTA
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    10370 3 -     36578 TGA
i Petromus_typicus.PetTyp_scaffold_33007                C 0 I 9
s Phocoena_phocoena.PhoPho_flattened_line_11948            119890 3 -    122454 CAA
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           2946 3 -      3310 CAA
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       22851 3 -     82327 CAA
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           19598 3 +     19957 CAA
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26737612 3 +  26888534 CAA
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            95396 3 +    112873 CAG
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             41589 3 -     61926 CAA
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        23018 3 +     78826 CAA
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              6969 3 -     15800 CAA
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        10167 3 -     16101 CAA
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          3476 3 +      9673 CAA
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13472470 3 -  19735023 CAA
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           11378 3 -     31692 CAA
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           3956 3 +     21690 CAA
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       20814 3 +     44506 AAA
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        21024 3 +     67491 AAA
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      11265 3 -     98129 AAA
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     20870 3 +    147771 AAA
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        21120 3 -     23762 AAA
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          1586 3 -     55515 AAA
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         20939 3 +    152463 AAA
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      7699 3 +      8943 AAA
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                         10659 3 +    134592 AAA
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          21249 3 -     75465 AAA
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              185137 3 -    373494 CAA
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19805045 3 +  19899266 CAA
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               3181 2 -     15069 C-A
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              3315 2 +     14865 C-A
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                74484 3 +     78963 AAA
i Procavia_capensis.ProCapCap_scaffold_15315            I 1 C 0
s Prolemur_simus.MPIZ01000048.1                           6846521 3 +  12164890 CAA
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    665138 3 -   2312742 NNN
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         1663 3 +     11805 CAA
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           40998 3 +     52369 CAA
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         33387 3 -     44753 CAA
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            15308 3 +     27322 CAA
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       14947 3 -     53241 CAA
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         37218 3 -     48185 CAA
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           31615 3 +     77221 TAA
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            2411 3 -     27784 CAA
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        244194 3 -    344369 CCA
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13244541 3 -  17261082 CAA
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             602491 3 -   3946241 CAA
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131532269 3 - 161321710 cca
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             27310 2 +     56732 C-A
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6803801 2 +   6970761 C-A
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             3194 2 +     18040 C-A
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                14364 3 +     68503 CAA
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13913587 3 +  90463843 taa
i Rattus_norvegicus.chr11                               C 0 I 8
s Rhinolophus_sinicus.LVEH01000179.1                      1786354 3 +   2252614 CAA
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           13747 2 -     14454 C-A
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206375073 2 - 206558726 C-A
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44853973 2 -  45163003 C-A
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                17831 3 +    109198 CAA
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       6165 3 +     12214 CAA
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15670694 3 -  43202129 CAA
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        2560 3 +     34089 CAA
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              2501 3 -     60842 CAA
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              2596 3 +     67014 CAA
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              2574 3 +     60816 CAA
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 2511 3 -     76454 CAA
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17339261 3 -  30362882 CAA
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         18636 3 -     62485 CAA
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   29915 3 -    114521 CAA
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1527475                       25735 2 +     26421 C-A
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       6195 2 +     20762 C-A
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         39930 2 +     40653 C-A
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                           10487 2 -     12194 C-A
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     23909 2 -     27512 C-A
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         32928 2 -     33692 C-A
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   97785 3 -    120886 TAA
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 I 24
s Solenodon_paradoxus.SolPar_flattened_line_1012            16554 3 +    739146 CAA
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17748770 3 -  27805282 NNN
i Sorex_araneus.JH798170.1                              C 0 I 39
s Spermophilus_dauricus.KZ294190.1                        2238050 3 +   2842873 CAA
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             232951 3 -    276980 GCA
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            25512 3 +     62062 CCA
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189270415 3 + 218635234 CAA
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        12863 3 -  13920577 CAA
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               4353 3 -      6213 CAA
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 I 45
s Tamandua_tetradactyla.TamTet_scaffold_26877               13275 3 +     45698 CAA
i Tamandua_tetradactyla.TamTet_scaffold_26877           I 6 C 0
s Tapirus_indicus.TapInd_scaffold_176                      805281 3 +   1148477 CCA
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  55941 3 +     99546 CCA
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               24581 3 +     42269 AAA
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               57897 3 +     65473 AAA
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194005224 3 - 194193292 CAA
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             37431 3 -     47444 CAA
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 I 9
s Tolypeutes_matacus.TolMat_scaffold_269431                  2151 3 +      6782 CAA
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  134420 3 -    259118 CAA
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        24305 2 +     38948 C-A
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   18032 2 -     32910 C-A
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       23930 2 +     24652 C-A
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      2808 2 -      3559 C-A
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           40752 2 -     54611 C-A
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       16753 2 +     17312 C-A
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    24116 2 -     25040 C-A
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          2777 2 +      3528 C-A
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  49144 2 +     51589 C-A
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       12320 2 +     14732 C-A
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       2797 2 -     28054 C-A
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44657592 2 -  44834318 C-A
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        2601 2 +      3372 C-A
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   3763 3 +     90398 CAA
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16079864 2 +  31416278 AG-
i Trichechus_manatus.JH594618.1                         I 1 C 0
s Tupaia_chinensis.KB320831.1                             2790513 3 -   3938065 TAA
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    3037 3 +     13056 CAA
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69311990 3 -  96451834 CAA
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 25114 3 -     25548 CGA
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6512755 3 +  28682327 cca
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  3362 3 -     20643 CAA
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             22906 3 -     33872 CAA
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1523223 3 -   2331223 CAA
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                135690 3 -    281493 CCA
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       125147 3 -    134049 CAA
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        212221 3 -    227762 CCA
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     13378 3 -     20485 CAA
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           5487 3 -      8775 CAA
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Mesoplodon_bidens.MesBid_scaffold_183284                   2166 255 +      2166 T
e Hipposideros_galeritus.HipGal_scaffold_104691              6125 0 -      9143 C
e Hipposideros_armiger.JXIK01001085.1                      276965 0 -    477199 C
e Condylura_cristata.JH655880.1                          60611207 0 +  78930452 C
e Macaca_tonkeana.k141_2870633                               2864 158 -     27140 T
e Macaca_nigra.k141_282495                                   2859 158 -     46448 T
e Macaca_maura.k141_251854                                  43912 158 -     79256 T

a score=0.000000
s hg38.chr4_GL000008v2_random                                9850 50 +    209709 AG-A-G-----------------------TAGTTGAA--GCTGC----AG----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTGTT
s Acinonyx_jubatus.LLWD01000356.1                         2031931 48 +   3721120 AG-A-A-----------------------TAATTGAA--ACAGC----AA----CTGAA--AA------TC----A---A---A-----g----------a-a---c---------a-agt---t-------a-t-tt---ta--tt
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    110603 28 -    189883 -----A-----------------------TTATTGAA--G--------TA----ACAAC--CA------GA----G--TTGTTT---------------------------------------------------------------
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 2 I 22
s Ailuropoda_melanoleuca.LNAT01000321.1                  10655273 49 +  23371972 ga-a-a-----------------------tcaTTGAA--GTA-C----AA----TTGAG--AA------TC----A---A---A-----A----------A-G---t---------a-aat---t-------c-t-tt---tcactt
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7091989 50 -  16596857 ca-a-a-----------------------tcaTTGAA--GCGGC----AA----TTGAG--AA------TC----A---A---A-----G----------A-A---T---------A-agt---t-------c-t-tt---ccactt
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   10926 35 -     22067 AAAA-A-----------------------ATTTTGAA--G--------CA----GCAGT--CA------TAAATTA-TCT---T-----T---------------------------------------------------------
i Allactaga_bullata.AllBul_scaffold_70162               C 0 I 18
s Allenopithecus_nigroviridis.k141_3103707                  60867 50 +     61638 AG-A-A-----------------------TGGTTGAA--ACTGC----AA----TAGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTGTT
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        52675 50 +     53391 AG-A-A-----------------------TGGTTGAA--ACTGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTGTT
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         3400 50 +     72529 AG-A-A-----------------------TGGTTGAA--ACTGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTGTT
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          2975 50 +      3797 AG-A-A-----------------------TGGTTGAA--ACTGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTGTT
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             8148 50 -     18050 AG-A-A-----------------------TGGTTGAA--GCAGC----AA----TTGAG--AG------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GATGTT
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  9261 50 -     11521 AG-A-A-----------------------TGGTTGAA--GCAGC----AA----TTGAG--AG------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GATGTT
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              8825 50 -     21359 AG-A-A-----------------------TGGTTGAA--GCAGC----AA----TTGAG--AG------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GATGTT
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_298055                                  116 50 +      1823 AG-A-A-----------------------TGGTTGAA--GCAGC----AA----TTGAG--AC------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GATGTT
i Alouatta_juara.k141_298055                            C 0 C 0
s Alouatta_macconnelli.k141_1331706                          8116 50 -     10438 AG-A-A-----------------------TGGTTGAA--GCAGC----AA----TTGAG--AG------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GATGTT
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            4772 50 +      7047 AG-A-A-----------------------TGGTTGAA--GCAGC----AA----TTGAG--AG------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GATGTT
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             8058 50 +     10410 AG-A-A-----------------------TGGTTGAA--GCAGC----AA----TTGAG--AG------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GATGTT
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            1861 50 -      4927 AG-A-A-----------------------TGGTTGAA--GCAGC----AA----TTGAG--AG------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GATGTT
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             4791 50 +      6429 AG-A-A-----------------------TGGTTGAA--GCAGC----AA----TTGAG--AG------TT----A---T---C-----C----------T-T---T---------T-CTC---T-------T-T-TT---GATGTT
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3518710 39 +   4113121 AG-A-A-----------------------TCATTGAA--GTGGC----AT----TTgag--ag------tt----a---t---t-----t----------t-a---t---------t-ctt--------------------------
i Ammotragus_lervia.NIVO01013474.1                      C 0 I 10
s Anoura_caudifer.AnoCau_scaffold_422                      388863 36 -    631301 AG-A-A-----------------------TCACTGAA--GCACT----GA----CTGAG--AA------CC----A---T---C-----T----------T-C---T---------T------------------------------
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 I 9
s Antilocapra_americana.AntAmePen_scaffold_42841            29296 39 +     33004 AG-A-A-----------------------TCATTGAA--GTCAC----AT----TTGAG--AG------TT----A---C---C-----T----------T-A---T---------T-CTT--------------------------
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 I 10
s Aotus_azarae.k141_3170768                                 60509 50 +     78111 AG-A-A-----------------------TGGTTGAA--GCAGC----AA----ATGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GATGTT
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            3450 50 +     22701 AG-A-A-----------------------TGGTTGAA--GCAGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GATGTT
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5747407 50 +   9889416 AG-A-A-----------------------TGGTTGAA--GCAGC----AA----TTGag--aa------tt----a---t---c-----t----------t-t---t---------t-ctc---t-------t-t-tt---gatgtt
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             3992 50 -    104377 AG-A-A-----------------------TGGTTGAA--GCAGC----AA----ATGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GATGTT
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               3998 50 +     23246 AG-A-A-----------------------TGGTTGAA--GCAGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GATGTT
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     2005 33 +      5067 AG-A-A-----------------------AGATTGAA--A----CTGCAA----TCAAG--AA------TC----A---T---C-----T----------T----------------------------------------------
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 I 14
s Arctocebus_calabarensis.k141_1161114                      15947 36 +     17483 AG-A-A-----------------------ATTTTGAA--ATAGT----GA----TTAAT--AA------AT----A---T---C-----AT-T-------T-T--------------------------------------------
i Arctocebus_calabarensis.k141_1161114                  C 0 I 6
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 7259 36 -     29036 AG-A-A-----------------------TCACTGAA--GCTGT----GA----CTGAA--AA------CC----A---T---C-----T----------C-C---T---------T------------------------------
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 I 9
s Ateles_geoffroyi_b.tarseq_2582                             9537242 50 +  39197703 AG-A-A-----------------------TGGTTGAA--GCAGC----AA----TTGAG--AG------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GATATT
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             58526 50 +     85812 AG-A-A-----------------------TGGTTGAA--GCAGC----AA----TTGAG--AG------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GATATT
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 9525 50 +     89302 AG-A-A-----------------------TGGTTGAA--GCAGC----AA----TTGAG--AG------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GATATT
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             14030 50 -     58268 AG-A-A-----------------------TGGTTGAA--GCAGC----AA----TTGAG--AG------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GATATT
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             62021 50 +    119057 AG-A-A-----------------------TGGTTGAA--GCAGC----AA----TTGAG--AG------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GATATT
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               3990 50 -     25888 AG-A-A-----------------------TGGTTGAA--GCAGC----AA----TTGAG--AG------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GATATT
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 4740 50 -     16375 AG-A-A-----------------------ACATTGAA--ATAGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTATT
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              1060 50 +      2719 AG-A-A-----------------------ACATTGAA--ATAGC----AA----TTGAA--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTATT
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26378710 50 +  51448160 AG-A-A-----------------------TCATTGAA--GCAGC----AT----TTGAG--AA------TT----A---C---C-----T----------T-A---T---------T-CTT---T-------T-T-TG---GCTACT
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        3942 50 -     13118 AG-A-A-----------------------TCATTGAA--GCAGC----AT----TTGAG--AA------TT----A---C---C-----T----------T-A---T---------T-CTT---T-------T-T-TG---GCTACT
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   41777 39 -     72089 AG-A-A-----------------------TCATTGAA--GTGGC----AT----TTGAA--AA------TT----A---T---T-----T----------G-A---T---------T-CTT--------------------------
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 I 10
s Bison_bison.KN264915.1                                  6557803 39 +   6870073 AG-G-A-----------------------CCATTGAA--GAGGC----AT----TTGAg--aa------tt----a---c---t-----t----------t-a---t---------t-ctt--------------------------
i Bison_bison.KN264915.1                                C 0 I 10
s Bos_indicus.CM003021.1                                138138042 39 - 161108492 AG-G-A-----------------------CCATTGAA--GANGC----AT----TTGAg--aa------tt----a---c---t-----t----------t-a---t---------t-ctt--------------------------
i Bos_indicus.CM003021.1                                C 0 I 10
s Bos_mutus.JH883513.1                                     570416 39 -    998990 AG-G-A-----------------------CCATTGAA--GAGGA----AT----TTGAg--aa------tt----a---c---t-----t----------t-a---t---------t-ctt--------------------------
i Bos_mutus.JH883513.1                                  C 0 I 10
s Bos_taurus.CM000177.6                                 136293775 39 - 158972876 AG-G-A-----------------------CCATTGAA--GAGGC----AT----TTGAg--aa------tt----a---c---t-----t----------t-a---t---------t-ctt--------------------------
i Bos_taurus.CM000177.6                                 C 0 I 10
s Bubalus_bubalis.KI419065.1                              1229531 39 -   1914593 AG-A-A-----------------------CCATTGAT--GTGGC----at----ttgag--aa------tt----a---c---t-----t----------t-a---t---------t-ctt--------------------------
i Bubalus_bubalis.KI419065.1                            C 0 I 10
s Cacajao_ayresi.k141_724503                               111883 50 -    171031 AG-A-A-----------------------TGGTTGAA--GCAGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GATGTT
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 10909 50 +    125063 AG-A-A-----------------------TGGTTGAA--GCAGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GATGTT
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                12957 50 -    216513 AG-A-A-----------------------TGGTTGAA--GCAGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GATGTT
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        5497 50 -    134917 AG-A-A-----------------------TGGTTGAA--GCAGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GATGTT
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3218117 51 -   8989139 AG-AAA-----------------------TCATTGAA--GCAGC----AA----TTGAg--aa------tt----a---t---c-----t----------t-a---t---------t-ctt---t-------t-t-tg---gCTATT
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           395822 51 -  15254737 AG-AAA-----------------------TCATTGAA--GCAGC----AA----TTGAG--aa------tt----a---t---c-----t----------t-c---t---------t-ctt---t-------t-t-tg---gcTATT
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2971555 51 +   6889770 AG-AAA-----------------------TCATTGAA--GCAGC----AA----TTGAg--aa------tt----a---t---c-----t----------t-a---t---------t-ctt---t-------t-t-tg---gCTATT
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11516647 50 +  39901454 CA-A-A-----------------------TCATTGAA--GCAGC----AA----CTGAG--AA------TC----A---A---A-----G----------A-A---T---------A-AGT---T-------C-T-TC---TCACTT
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   11665 50 +     87036 CA-A-A-----------------------TCATTGAA--GCAGC----AA----CTGAG--AA------TC----A---A---A-----G----------A-A---T---------A-AGT---T-------C-T-TC---TCACTT
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11263308 50 -  35597290 CA-A-A-----------------------TCATTGAA--GCAGC----AA----CTGAG--AA------TC----A---A---A-----G----------A-A---T---------A-Agt---t-------c-t-tc---tcactt
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11085837 50 +  39895921 CA-A-A-----------------------TCATTGAA--GCAGC----AA----CTGAG--AA------TC----A---A---A-----G----------A-A---T---------A-Agt---t-------c-t-tc---tcactt
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16452861 50 -  44759192 ca-a-a-----------------------tcATTGAA--GCAGC----AA----CTGAG--AA------TC----A---A---A-----G----------A-A---T---------A-Agt---t-------c-t-tc---tcactt
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21323786 39 + 157394656 AG-A-A-----------------------TCATTGAA--GTGAc----at----ttgag--aa------tt----a---t---t-----t----------t-a---t---------t-ctt--------------------------
i Capra_aegagrus.CM003214.1                             C 0 I 10
s Capra_hircus.CM004562.1                               135705013 39 - 157403528 AG-A-A-----------------------TCATTGAA--GTGAC----at----ttgag--aa------tt----a---t---t-----t----------t-a---t---------t-ctt--------------------------
i Capra_hircus.CM004562.1                               C 0 I 10
s Capromys_pilorides.CapPil_scaffold_979108                   130 19 -      1248 -----------------------------------------------------------------------------------------T----------T-T---C---------C-CCC---T-------T-T-CT---GCCGTT
i Capromys_pilorides.CapPil_scaffold_979108             I 9 C 0
s Carlito_syrichta.NW_007248099.1                          307101 46 +    345090 AG-A-G-----------------------TCATTGAG--GCAGC----AA----TCAag--aa------tt----a---t---c-----t----------t-t---t---------t-ctc---t-------t-g-at-------tt
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               58055 36 +     67245 AG-A-A-----------------------TCACTGAA--GCAGT----GA----CTGAA--AA------CC----A---T---C-----T----------T-C---T---------T------------------------------
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 I 9
s Castor_canadensis.CasCan_scaffold_47037                   28541 50 +     33760 GG-A-A-----------------------TCATTGAA--G--------CAGCAATCAAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTT---T-------A-T-AT---ACTATT
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15784737 14 -  24422027 ----------------------------------------------------------------------------------------------------------------------ctc---t-------t-t-ct---tccatt
i Cavia_aperea.AVPZ01000278.1                           I 12 C 0
s Cavia_porcellus.DS562889.1                             15796669 14 -  24440124 ----------------------------------------------------------------------------------------------------------------------ctc---t-------t-t-ct---tccatt
i Cavia_porcellus.DS562889.1                            I 12 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       174860 14 +    436027 ----------------------------------------------------------------------------------------------------------------------CTC---T-------T-T-CT---TCCATT
i Cavia_tschudii.CavTsc_scaffold_488                    I 12 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   157346 30 -    276539 AG-A-A-----------------------TCACTGAA--GCAGA----AA----CTGAG--AA------TT----A---T-------------------------------------------------------------------
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 I 12
s Cebus_albifrons.Contig22                               18888736 50 -  29618158 AG-A-A-----------------------TGGTTGAA--GCAGC----AA----TTGAG--AA------TT----A---T---C-----C----------T-T---T---------T-CTC---T-------T-G-TT---AATGTT
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 6280 50 -     26817 AG-A-A-----------------------TGGTTGAA--GCAGC----AA----TTGAG--AA------TT----A---T---C-----C----------T-T---T---------T-CTC---T-------T-G-TT---AATGTT
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                10520 50 +     25043 AG-A-A-----------------------TGGTTGAA--GCAGC----AA----TTGAG--AA------TT----A---T---C-----C----------T-T---T---------T-CTC---T-------T-G-TT---AATGTT
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         6134 46 +     21754 AG-A-G-----------------------TCATTGAG--GCAGC----AA----TCAAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-G-TT-------TT
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4362426 50 +   7569818 AG-A-A-----------------------CCATTGAA--GCAGC----AA----TGCAG--AA------TC----A---T---C-----A----------C-G---T---------T-CTC---T-------T-T-TC---ACTATT
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         2178 50 -      9338 AG-A-A-----------------------CCATTGAA--GCAGC----AA----TGCAG--AA------TC----A---T---C-----A----------C-A---T---------T-CTC---T-------T-T-TC---ACTATT
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6552659 50 +   6739814 AG-A-A-----------------------TGGTTGAA--ACTGC----AA----TTGAg--aa------tt----a---t---c-----t----------t-t---t---------t-ctc---t-------t-t-tt---gctgtt
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      54136 50 -     54931 AG-A-A-----------------------TGGTTGAA--ACTGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTGTT
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         19120 50 -     19697 AG-A-A-----------------------TGGTTGAA--ACTGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTGTT
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         56651 50 -    107033 AG-A-A-----------------------TAGTTGAA--ACTGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTGTT
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        3091 50 -      3853 AG-A-A-----------------------TGGTTGAA--ACTGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTGTT
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          27027 50 +     30494 AG-A-A-----------------------TGGTTGAA--ACTGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTGTT
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           3051 50 -      4022 AG-A-A-----------------------TGGTTGAA--ACTGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTATT
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          2945 50 -      3505 AG-A-A-----------------------TGGTTGAA--ACTGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTGTT
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           21733 50 +     35983 AG-A-A-----------------------TGGTTGAA--ACTGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTGTT
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11988270 50 +  12117833 AG-A-A-----------------------TGGTTGAA--ACTGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTGTT
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46475023 50 +  46592721 AG-A-A-----------------------TGGTTGAA--ACTGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTGTT
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      32852 50 +     33420 AG-A-A-----------------------TGGTTGAA--ACTGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTGTT
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        2886 50 -      3443 AG-A-A-----------------------TGGTTGAA--ACTGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CAC---T-------T-T-TT---GCTGTT
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      3879 50 -      4669 AG-A-A-----------------------TGGTTGAA--ACTGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTGTT
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        3672 50 -      4411 AG-A-A-----------------------TGGTTGAA--ACTGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTGTT
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         3202 50 -      4205 AG-A-A-----------------------TGGTTGAA--ACTGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTATT
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_1070855          1426 31 -      1715 AG-A-A-----------------------TA----TA--GCAGC----AA----TTAAG--AA------TC----A---T---A-----T----------C-C---T----------------------------------------
i Chaetophractus_vellerosus.ChaVel_scaffold_1070855     C 0 I 13
s Cheirogaleus_major.k141_1157592                           57046 50 -     68416 CG-A-A-----------------------ACATTGAA--ATAGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTATT
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            6088 50 +     13308 TG-A-A-----------------------ACATTGAA--ATAGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTATT
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             3553 34 -     18223 AG-A-A-----------------------TGGTTGAA--GTAGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T--------------------------------------------
i Cheracebus_lucifer.k141_619653                        C 0 I 8
s Cheracebus_lugens.k141_203936                             20576 34 +     25473 AG-A-A-----------------------TGGTTGAA--GTAGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T--------------------------------------------
i Cheracebus_lugens.k141_203936                         C 0 I 8
s Cheracebus_regulus.k141_2128895                           39615 34 +     57117 AG-A-A-----------------------TGGTTGAA--GTAGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T--------------------------------------------
i Cheracebus_regulus.k141_2128895                       C 0 I 8
s Cheracebus_torquatus.k141_315545                          44290 34 +     54541 AG-A-A-----------------------TGGTTGAA--GTAGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T--------------------------------------------
i Cheracebus_torquatus.k141_315545                      C 0 I 8
s Chinchilla_lanigera.JH721867.1                         15959898 19 +  43084221 -----------------------------------------------------------------------------------------T----------T-T---T---------C-CTC---T-------T-C-CA---GCCAGT
i Chinchilla_lanigera.JH721867.1                        I 9 C 0
s Chiropotes_israelita.k141_1189915                         69105 50 +    196370 AG-A-A-----------------------TGGTTGAA--GCAGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GATGTT
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          13285 50 +     40510 AG-A-A-----------------------TGGTTGAA--GCAGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GATGTT
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15136486 50 -  15256731 AG-A-A-----------------------TGGTTGAA--ACTGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTGTT
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      31532 50 -     53260 AG-A-A-----------------------TGGTTGAA--ACTGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTGTT
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101141981 50 + 101219884 AG-A-A-----------------------TGGTTGAA--ACTGC----AA----TTGag--aa------tt----a---t---c-----t----------t-t---t---------t-ctc---t-------t-t-tt---gctgtt
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                15009 48 -     21363 AG-A-A-----------------------TAGACAAA--GCAGC----AA----TTAAG--AA------TC----A---T---G-----C----------T-A---T---------T-CTCTTCT-------C-A-T--------TG
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           760320 48 +    964067 AG-A-A-----------------------TAGACAAA--GCAGC----AA----TTAAG--AA------TC----A---T---G-----C----------T-A---T---------T-CTCTTCT-------C-A-T--------TG
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10880560 50 +  10971483 AG-A-A-----------------------TGGTTGAA--ACTGC----AA----TTGAg--aa------tt----a---t---c-----t----------t-t---t---------t-ctc---t-------t-t-tt---gctgtt
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147661718 50 + 156195979 AG-A-A-----------------------TGGTTGAA--ACTGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTGTT
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            13705 50 +     23629 AG-A-A-----------------------TGGTTGAA--ACTGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTGTT
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60611207 14 +  78930452 ----------------------------------------------------------------------------------------------------------------------TAC---T-------T-T-TT---ACTATT
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         37775 30 -     40477 AT-A-A-----------------------TCATTGAT--GCAAC----AA----TTGAG--AA------TC----A---T-------------------------------------------------------------------
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 I 14
s Cricetomys_gambianus.CriGam_scaffold_949                 276499 47 -    399297 ag-g-a-----------------------ttactgaa--G--------TA----ATAAC--CA------GG----A--AT---T-----C----------T-T---T---------T-CTC---T-------T-C-TT---GGAATT
i Cricetomys_gambianus.CriGam_scaffold_949              I 907 C 0
s Cricetulus_griseus.LT883672.1                          53027124 47 +  72327488 AG-G-A-----------------------TTATTGAA--G--------TC----ACATC--CA------GG----A--TT---A-----A----------T-T---T---------T-CTC---T-------C-C-tc---agaatt
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             18244 39 -     19186 AA-C-A-----------------------TTATTGAAGTA-AGG----AA----TTAAA--AA------TT----A---C---C-----C----------A-A---T---------T-TT---------------------------
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 I 9
s Cryptoprocta_ferox.CryFer_flattened_line_19014            49945 47 -     70449 AG-A-A-----------------------TCATTGAA--GCAAC----AA----CTGAA--AA------TC----A---A---A-----G----------A-A---T---------A-AGT---T-------C-T-TTT-TA-----
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  206305 26 -    956709 -------------------------------------------------------------AA------TC----A---C---C-----C----------T-T---T---------C-CTC---T-------T-T-CA---GCCTTT
i Ctenodactylus_gundi.CteGun_scaffold_447               I 13 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 28667 19 -     67205 -----------------------------------------------------------------------------------------T----------T-T---C---------C-CTC---T-------T-T-CT---GCCATT
i Ctenomys_sociabilis.CteSoc_scaffold_19489             I 9 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                15890 19 +     26546 -----------------------------------------------------------------------------------------T----------T-T---T---------C-TTC---T-------T-T-CT---ACCATC
i Cuniculus_paca.CunPac_flattened_line_16637            I 9 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             56988 19 -    236241 -----------------------------------------------------------------------------------------T----------T-T---T---------C-CTC---T-------T-T-CT---GCCATT
i Dasyprocta_punctata.DasPun_flattened_line_634         I 9 C 0
s Dasypus_novemcinctus.JH568778.1                          180223 49 -   6883506 AG-A-A-----------------------TA----TA--GCAAC----AA----TTAAG--AA------TC----A---T---A-----T----------T-C---T---------T-CTCTTCT-------T-A-TT---ACTATC
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16842901 50 +  31942871 AG-A-A-----------------------ACATTGAA--ACAGC----AA----CTGAG--AA------TT----A---C---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTATT
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80035396 50 -  96802777 AG-A-A-----------------------TCACTGAA--GCAGC----AT----TTGAG--AA------TT----A---C---C-----T----------T-A---T---------T-CTT---T-------T-T-TG---GCTATT
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18697367 32 -  18957592 AG-A-A-----------------------TCCCTGAA--GCAGT----GA----CTAAG--AA------CC----A---T---C-----T---------------------------------------------------------
i Desmodus_rotundus.KZ672188.1                          C 0 I 10
s Dicerorhinus_sumatrensis.PEKH010003161.1                 321074 49 +    993696 AG-A-A-----------------------CCATTGAA--GCAGC----AA----TGGAG--AA------GC----A---T---C-----A----------T-A---T---------T-CCC---T-------T-T--C---ACTATT
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   1725 50 +    151128 AG-A-A-----------------------CCATTGAA--GCAGC----AA----TGGAG--AA------TC----A---T---C-----A----------T-A---T---------T-CTC---T-------T-T-TC---GCTATT
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   155781 19 +    228994 -----------------------------------------------------------------------------------------T----------T-T---T---------C-CTC---T-------T-T-CT---GCCATT
i Dinomys_branickii.DinBra_scaffold_1996                I 9 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                34249 19 -     73477 -----------------------------------------------------------------------------------------A----------T-T---T---------C-CTC---T-------T-T-AT---GCCATT
i Dolichotis_patagonum.DolPat_scaffold_14102            I 9 C 0
s Dipodomys_ordii.KN672545.1                              3653509 27 +   4240102 CT-G-A-----------------------TCATTGTA--A--------TAGTtatcaag--aa------t-----------------------------------------------------------------------------
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 25073 27 +     28912 CT-G-A-----------------------TCATTGTA--A--------TAGTTATCAAG--AA------T-----------------------------------------------------------------------------
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Echinops_telfairi.JH980316.1                           22993108 53 -  44670279 NN-N-N-----------------------NNNNNNNN--NNNNN----NN----NNNNN--NN------NN----N---N---N-----N----------N-N---N---------G-CTCCATT-------C-T-AT---TCTATT
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 10743 36 +     24177 AG-A-A-----------------------TCATTGAA--GCAGC----AA----TTGAG--AA------GC----a---t---c-----t----------t-a---t---------t------------------------------
i Eidolon_helvum.KE772537.1                             C 0 I 9
s Elaphurus_davidianus.JRFZ01086400.1                     1490059 39 +   1727528 AG-A-A-----------------------TCATTGAA--TTGGC----AT----TTGAG--AA------Tt----a---c---c-----t----------t-a---t---------t-tat--------------------------
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 I 10
s Elephantulus_edwardii.JH947210.1                        7804802 56 +  15467074 GA-A-A-----------------------TAGCTGAA--TCAGC----AA----CTCAA--CG------TC----A---T---T-----G----------a-aggtt---------g-ttttttt-------c-t-tc---tctaat
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        237781 27 -    369425 GG-G-A-----------------------TTACTGAA--G--------TA----ACATC--ca------gc----a--tt-------------------------------------------------------------------
i Ellobius_lutescens.LOEQ01003611.1                     C 0 I 17
s Ellobius_talpinus.LOJH01090055.1                           4796 27 -      7838 ag-G-A-----------------------TTACTGAA--G--------TA----ACATC--CA------gc----a--tt-------------------------------------------------------------------
i Ellobius_talpinus.LOJH01090055.1                      C 0 I 18
s Enhydra_lutris.KZ291749.1                              85869720 50 +  99434291 CA-A-A-----------------------TCATTGAA--GTGGC----AA----TTGAG--aa------tc----a---a---a-----g----------a-a---t---------a-aat---t-------c-t-tt---tcactt
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4702320 36 +   6522550 AG-A-A-----------------------TCATTGAA--ACAGT----AA----TTGAG--AG------CC----A---T---C-----T----------T-A---T---------T------------------------------
i Eptesicus_fuscus.JH977687.1                           C 0 I 9
s Equus_asinus.JREZ01000062.1                             5851496 50 -   7175178 AG-A-A-----------------------CCATTGAA--GCAGC----AA----GTGAA--Aa------cc----a---t---c-----t----------t-c---t---------t-ctc---t-------t-t-tt---gctatt
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13349999 50 +  41866177 AG-A-A-----------------------CCATTGAA--GCAGC----AA----GTGAA--AA------Cc----g---t---c-----t----------t-c---t---------t-ctc---t-------t-t-tt---gctatt
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          11489 50 +     92910 AG-A-A-----------------------CCATTGAA--GCAGC----AA----GTGAA--AA------Cc----g---t---c-----t----------t-c---t---------t-ctc---t-------t-t-tt---gctatt
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11531022 59 +  16010500 AG-A-A-----------------------TCATTGAAGAGCagc----aa----aaaat--aa------tc----a---t---t-----t----------t-a---t---------t-aac---ttttttttt-t-tg---gctgtt
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48768664 50 -  48907691 AG-A-A-----------------------TGGTTGAA--ACTGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTGTT
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          313597 50 +    330699 AG-A-A-----------------------TCATTGAA--GCAGC----AT----TTGAG--AA------TT----A---C---C-----T----------T-A---T---------T-CTT---T-------T-T-TG---GCTATT
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             60028 71 +     89355 AG-A-ATCATTAAA--AAAAAAAAAAGAATCATTGAA--GCAGC----AT----TTGAG--AA------TT----A---C---C-----T----------T-A---T---------T-CTT---T-------T-T-TG---GCTATT
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              3092 50 +     13586 AG-A-A-----------------------ACATTGAA--ATAGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTATT
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               3027 50 -      6809 AG-A-A-----------------------ACATTGAA--ATAGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTATT
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             9502 50 +     36558 AG-A-A-----------------------ACATTGAA--ATAGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTATT
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             5817 50 +     60246 AG-A-A-----------------------ACACTGAA--ATAGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTATT
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 9300 50 +    109717 AG-A-A-----------------------ACATTGAA--ATAGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTATT
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               13679 50 +     16540 AG-A-A-----------------------ACACTGAA--ATAGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTATT
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                13955 50 +     27497 AG-A-A-----------------------ACATTGAA--ATAGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTATT
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           16421 50 +     26808 AG-A-A-----------------------ACATTGAA--ATAGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTATT
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                31145 50 +     46535 AG-A-A-----------------------ACATTGAA--ATAGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTATT
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              13868 50 -     29447 AG-A-A-----------------------ACATTGAA--ATAGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTATT
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129890907 48 - 159252932 AG-A-A-----------------------TAATTGAA--ACAGC----AA----CTGAA--AA------TC----A---A---A-----g----------a-a---c---------a-agt---t-------a-t-tt---ta--tt
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129277979 48 - 158578461 ag-a-a-----------------------taaTTGAA--ACAGC----AA----CTGAA--AA------TC----A---A---A-----g----------a-a---c---------a-agt---t-------a-t-tt---ta--tt
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 19114 48 +     52776 AG-A-A-----------------------TAATTGAA--ACAGC----AA----CTGAA--AA------TC----A---A---A-----G----------A-A---C---------A-AGT---T-------A-T-TT---TA--TT
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13890851 11 -  19261668 ----------------------------------------------------------------------------------------------------------------------------T-------T-T-CT---ACCATT
i Fukomys_damarensis.KN123630.1                         I 15 C 0
s Galago_moholi.ctg555                                     209002 50 -    847004 AG-A-A-----------------------ATTTTGAA--ATGGC----AA----TTGAG--AA------TT----C---T---C-----T----------T-T---T---------T-CTC---T-------T-C-CT---GTTTTT
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           11383 50 -     43889 AG-A-A-----------------------ATTTTGAA--ATGGC----AA----TTGAG--AA------TT----C---T---C-----T----------T-T---T---------T-CTC---T-------T-C-CT---GTTTTT
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           8447 52 +     27357 AG-A-A-----------------------ATTTCGAA--ATGGC----AA----TTGAG--AA------TT----C---T---C-----T----------C-T---T---------T-TTCT-CT-------T-C-TT---GTTTTT
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               154357 50 +    324696 AG-A-A-----------------------TCCTTGAA--GCAGC----AA----TCGAG--AA------TC----A---T---C-----T----------T-T---T---------C-TCT---T-------T-T-TT---GCTACT
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    179859 39 -    189561 AG-A-A-----------------------TCATCGAA--GTGGC----AT----TTGAG--AA------TT----A---C---C-----T----------T-A---T---------T-CTT--------------------------
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 I 10
s Glis_glis.GliGli_scaffold_79770                           10772 35 -     18683 AG-A-A-----------------------TCATTGAA--G----CTCCAA----TCATG--AA------TC----A---T---G-----T----------T-T---T----------------------------------------
i Glis_glis.GliGli_scaffold_79770                       C 0 I 12
s Gorilla_beringei.k141_111300                               3248 50 -     14630 AG-A-A-----------------------TGGTTGAA--GCAAC----AG----TTGAG--AA------TT----A---C---C-----T----------T-T---T---------T-CTT---G-------T-T-TT---GCTGTT
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119650347 50 - 195582420 AG-A-A-----------------------TGGTTGAA--GCAAC----AG----TTGAG--AA------TT----a---c---c-----t----------t-t---t---------t-ctt---g-------t-t-tt---gctgtT
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   75519 35 +    118900 AG-A-A-----------------------TCACTCAA--G----TTGCAA----TAACA--AA------AT----A---T---G-----T----------T-T---T----------------------------------------
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 I 5
s Hapalemur_alaotrensis.k141_1198205                         3652 50 +      3980 AG-A-A-----------------------ACATTGAA--ATAGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTATT
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             26128 50 +     26611 AG-A-A-----------------------ACATTGAA--ATAGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTATT
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             3588 50 +     56096 AG-A-A-----------------------ACACTGAA--ATAGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTATT
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        26865 50 -     42470 AG-A-A-----------------------ACACTGAA--ATAGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTATT
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        43459 50 -     54384 AG-A-A-----------------------ACATTGAA--ATAGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTATT
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              15156 33 +     53719 AG-A-A-----------------------TCATTGAA--GCAGC----AA----CTGAA--AA------TC----A---A---A-----G----------A----------------------------------------------
i Helogale_parvula.HelPar_flattened_line_22962          C 0 I 9
s Hemitragus_hylocrius.HemHyl_scaffold_16669                26058 39 -     91191 AG-A-A-----------------------TCATTGAA--GTGAC----AT----TTGAG--AA------TT----A---T---T-----T----------T-A---T---------T-CTT--------------------------
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 I 10
s Heterocephalus_glaber.JH602058.1                        2549231 19 +  31725842 -----------------------------------------------------------------------------------------t----------t-t---t---------c-ctc---t-------t-t-ct---gccaTG
i Heterocephalus_glaber.JH602058.1                      I 9 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               54620 54 +     73687 TG-A-A-----------------------GAGTTGAA--GTAGC----CA----TTGAA--AG------TC----A---C---TT----T----------C-A---T---------T-CTCTTCC-------C-T-TT---TCTATT
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              145629 32 +    277961 AG-A-A-----------------------TCACTGAA--GCGGC----AT----CTGAG--AA------TT----A---T---C-----T---------------------------------------------------------
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 I 15
s Hipposideros_armiger.JXIK01001085.1                      276965 17 -    477199 ------------------------------------------------------TTGAG--AA------TC----A---T---C-----T----------T-A---T---------T------------------------------
i Hipposideros_armiger.JXIK01001085.1                   C 0 I 13
s Hipposideros_galeritus.HipGal_scaffold_104691              6125 17 -      9143 ------------------------------------------------------TTGAG--AA------TC----A---T---C-----T----------T-A---G---------T------------------------------
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 I 13
s Hoolock_leuconedys.ctg2405                                   13288 51 -     15084 AG-A-A-----------------------TGGTTGAA--GCAGC----AG----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------TTCTC---T-------T-T-TT---GCTGTT
i Hoolock_leuconedys.ctg2405                               T 517 I 241
s Hyaena_hyaena.HyaHya_flattened_line_20729                 14210 45 -     67322 AG-A-A-----------------------TCATTGAA--GCAGC----AA----CTGAA--AA------TC----A---A---A-----G----------A-A---T---------A-AGT---T-------C-T-TT---A-----
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           17151 19 -    119109 -----------------------------------------------------------------------------------------T----------T-T---T---------C-CTG---T-------T-T-CT---GCCAGT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       I 9 C 0
s Hylobates_abbotti.k141_493872                              3068 51 +      5897 AG-A-A-----------------------TGGTTGAA--GCAGC----AG----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TTT--GCTGTT
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_1485652                              1489 50 -      1697 AG-A-A-----------------------TGGTTGAA--GCAGC----AG----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTGTT
i Hylobates_agilis.k141_1485652                         C 0 C 0
s Hylobates_klossii.k141_466549                              9513 50 +     11537 AG-A-A-----------------------TGGTTGAA--GCAGC----AG----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTGTT
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14622614 50 -  25970782 AG-A-A-----------------------TGGTTGAA--GCAGC----AG----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTGTT
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1133650                            2503 51 -      2775 AG-A-A-----------------------TGGTTGAA--GCAGC----AG----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TTT--GCTGTT
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             32001 50 -     60944 AG-A-A-----------------------TGGTTGAA--GCAGC----AG----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTGTT
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     4278 19 +     22540 -----------------------------------------------------------------------------------------T----------T-T---T---------T-CTC---T-------T-T-CT---GTCATT
i Hystrix_cristata.HysCri_scaffold_50788                I 9 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7124137 33 +  13083262 AG-A-A-----------------------TCATTGAA--G----CTGCAG----TCAag--aa------tc----a---t---t-----t----------t----------------------------------------------
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 I 14
s Indri_indri.k141_1884019                                   1332 50 -      2196 AG-A-A-----------------------ACATTGAA--ATAGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CCC---T-------T-T-TT---GCTATT
i Indri_indri.k141_1884019                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               7384 50 +     17520 AG-A-A-----------------------TCACTGAA--GCAGC----AT----TTGAG--AA------TT----A---C---C-----T----------T-A---T---------T-CTT---T-------T-T-TG---GCTATT
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8563666 34 +  11848649 AG-A-A-----------------------TTTTTGAA--G--------GA----ATAGT--CA------CAAATTA-TCT---T-----T---------------------------------------------------------
i Jaculus_jaculus.JH725517.1                            C 0 I 18
s Kogia_breviceps.KogBre_flattened_line_35920               22209 50 +     37189 AG-A-A-----------------------TCATTGAA--GCACC----AT----TTGAG--AA------TT----A---C---C-----T----------T-A---T---------T-CTT---T-------T-T-TG---GCTATT
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          48111 50 -    147782 AG-A-A-----------------------TGGTTGAA--GCAGC----AA----TTGAG--AG------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GATGTT
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   112113 36 -    115756 AG-A-A-----------------------TCATTGAA--ACAGT----AA----TTGAG--AG------CC----A---T---C-----T----------T-A---T---------T------------------------------
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 I 9
s Lemur_catta.scaffold_1                                258405148 50 - 285822530 AG-A-A-----------------------ACATTGAA--ATAGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTATT
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        22017 50 +     39228 AA-A-A-----------------------ACATTGAA--ATGGC----AA----TTGAG--AA------TT----A---C---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTATT
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            51392 50 +     63517 AA-A-A-----------------------ACATTGAA--ATGGC----AA----TTGAG--AA------TT----A---C---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTATT
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        76635 50 +    116806 AA-A-A-----------------------ACATTGAA--ATGGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTATT
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     29656 50 -     33031 AA-A-A-----------------------ACATTGAA--ATGGC----AA----TTGAG--AA------TT----A---C---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTATT
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3083941 50 -   3498232 ca-a-a-----------------------tcATTGAA--GCAGC----AA----TTGAG--CA------TC----A---A---A-----G----------A-A---T---------a-agt---t-------c-t-tt---tcactt
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    11123 38 +     22452 GG-A-G-----------------------TCATGGAC--ACAGC----AA----CTGAG--AA------TC----A---C---A-----T----------T-T--TT---------T-C----------------------------
i Lepus_americanus.LepAme_scaffold_62849                C 0 I 12
s Lipotes_vexillifer.KE558548.1                            134544 50 +   3060487 AG-A-A-----------------------TCACTGAA--GCAGC----AT----TTGAG--AA------TT----A---C---C-----T----------T-A---T---------T-CTT---T-------T-G-TG---GCTATT
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19245747 50 +  19376315 AG-A-A-----------------------TGGTTGAA--ACTGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCCGTT
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            8747 27 +     84689 AG-A-A-----------------------ATTTTGAA--ATAGA----AA----TTGAG--AA------T-----------------------------------------------------------------------------
i Loris_lydekkerianus.k141_550999                       C 0 I 23
s Loris_tardigradus.ctg97                                 3776498 27 +   6799190 AG-A-A-----------------------ATTTTGAA--ATAGA----AA----TTGAG--AA------T-----------------------------------------------------------------------------
i Loris_tardigradus.ctg97                               C 0 I 23
s Loxodonta_africana.GL010040.1                          20589417 53 -  62548349 AG-A-A-----------------------TAGTTGAA--GGAGC----AA----TTGAA--AG------cc----a---t---t----tt----------c-a---t---------t-ctcttct-------c-t-tt---t-tatt
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11085293 50 +  39895028 CA-A-A-----------------------TCATTGAA--GCAGC----AA----CTGAG--AA------TC----A---A---A-----G----------A-A---T---------A-Agt---t-------c-t-tc---tcactt
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             17431 50 +     74745 AG-A-A-----------------------TGGTTGAA--GCTGC----AA----TTGAG--AA------TT----A---T---C-----C----------T-T---T---------T-CTC---T-------T-T-TT---GCTGTT
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12703937 50 +  12821369 AG-A-A-----------------------TGGTTGAA--GCTGC----AA----TTGAG--AA------TT----A---T---C-----C----------T-T---T---------T-CTC---T-------T-T-TT---GCTGTT
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               6033 50 +      6569 AG-A-A-----------------------TGGTTGAA--GCTGC----AA----TTGAG--AA------TT----A---T---C-----C----------T-T---T---------T-CTC---T-------T-T-TT---GCTGTT
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           44335 50 +     63263 AG-A-A-----------------------TGGTTGAA--GCTGC----AG----TTGAG--AA------TT----A---T---C-----C----------T-T---T---------T-CTC---T-------T-T-TT---GCTGTT
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_925451                                  343 50 +     10231 AG-A-A-----------------------TGGTTGAA--GCTGC----AA----TTGAG--AA------TT----A---T---C-----C----------T-T---T---------T-CTC---T-------T-T-TT---GCTGTT
i Macaca_fuscata.k119_925451                            C 0 C 0
s Macaca_leonina.k141_3421209                                2484 50 +      3017 AG-A-A-----------------------TGGTTGAA--GCTGC----AA----TTGAG--AA------TT----A---T---C-----C----------T-T---T---------T-CTC---T-------T-T-TT---GCTGTT
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_mulatta.NC_041755.1                            196033014 50 + 196197964 AG-A-A-----------------------TGGTTGAA--GCTGC----AA----TTGAG--Aa------tt----a---t---c-----c----------t-t---t---------t-ctc---t-------t-t-tt---gctgtt
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11443120 50 +  11645122 AG-A-A-----------------------TGGTTGAA--GCTGC----AA----TTGAG--Aa------tt----a---t---c-----c----------t-t---t---------t-ctc---t-------t-t-tt---gctgtt
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_radiata.k141_1580474                                2876 50 -      3617 AG-A-A-----------------------TGGTTGAA--GCTGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCCATT
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 13206 50 -     55006 AG-A-A-----------------------TGGTTGAA--GCTGC----AA----TTGAG--AA------TT----A---T---C-----C----------T-T---T---------T-CTC---T-------T-T-TT---GCTGTT
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43838243 50 +  43892939 AG-A-A-----------------------TGGTTGAA--GCTGC----AA----TTGAG--AA------TT----A---T---C-----C----------T-T---T---------T-CTC---T-------T-T-TT---GCTGTT
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                5465 50 -      5978 AG-A-A-----------------------TGGTTGAA--GCTGC----AA----TTGAG--AA------TT----A---T---C-----C----------T-T---T---------T-CTC---T-------T-T-TT---GCTGTT
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                700159 36 +    802869 AG-A-A-----------------------TCTTTGAA--GCAGA----AA----TTGAG--AA------GC----A---T---C-----T----------T-A---T---------T------------------------------
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 I 9
s Mandrillus_leucophaeus.scaffold125                     43434907 52 -  43563597 AG-A-A-----------------------TGGTTGAA--ACTGC----AA----TTGAGAAAA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTGTC
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4447733 52 -   4543643 AG-A-A-----------------------TGGTTGAA--ACTGC----AA----TTGAGAAAA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTGTC
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            144651 50 +    252755 AG-A-A-----------------------TGATTGAG--ACAGC----AA----TTAAG--AA------TC----A---T---c-----t----------t-a---t---------t-ctc---t-------t-t-ct---gctatt
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             34725 50 +     58827 AG-A-A-----------------------TGATTGAG--ACAGC----AA----TTAAG--AA------TC----A---T---C-----T----------T-A---T---------T-CTC---T-------T-T-CT---ACTATT
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36871972 33 +  64221397 AG-A-A-----------------------TCATTGAA--G----CTGCAG----TCAag--aa------tc----a---t---t-----t----------t----------------------------------------------
i Marmota_marmota.CZRN01000005.1                        C 0 I 14
s Megaderma_lyra.MegLyr_scaffold_3562                       62819 36 -    234502 AG-A-A-----------------------TCGTTGAA--GCAGC----AA----TGGAC--AA------TT----A---T---A-----T----------G-A---T---------T------------------------------
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 I 13
s Mellivora_capensis.MelCap_flattened_line_146202             531 50 -      1999 CA-A-A-----------------------TCATTGAA--GTGGC----AA----TTGAG--AA------TC----A---A---A-----G----------A-A---T---------A-AAT---T-------C-T-TT---TCACTT
i Mellivora_capensis.MelCap_flattened_line_146202       C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               10078 28 +     15977 AG-G-A-----------------------TTATTTAA--G--------TA----GCAAC--CA------GG----A--AT---T---------------------------------------------------------------
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 I 19
s Mesocricetus_auratus.KB708139.1                         1044863 47 -  26018355 AG-G-A-----------------------TTATTGAA--T--------TA----ACATC--ca------tg----a--tt---t-----a----------t-t---t---------t-ctc---t-------t-c-tc---agaatt
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Microcebus_murinus.CM007691.1                          16508268 49 +  47401472 AG-A-A-----------------------ACATTGAA--ATAGC----AA----T-Gag--aa------tt----a---t---c-----t----------t-t---t---------t-atc---t-------t-t-tt---gctatT
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  29533 53 -     48017 AG-A-A-----------------------GAGTTGAA--ACATC----AA----TTGGA--AG------TC----A---T---T-----T----------A-A---T---------T-CTCCATT-------C-T-AT---TCTATT
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               21239 36 -     32043 AG-A-A-----------------------TCACTGGA--GCAGT----AA----CTGAG--AA------CC----A---T---C-----T----------T-A---T---------T------------------------------
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 I 9
s Microtus_ochrogaster.CM001673.1                        22817983 27 -  98408828 at-g-a-----------------------TTATTGAA--G--------TA----ACAtg--ca------gc----a--tt-------------------------------------------------------------------
i Microtus_ochrogaster.CM001673.1                       C 0 I 18
s Miniopterus_natalensis.LDJU01000022.1                   8207989 34 +  10048721 GG-A-A-----------------------TCACTGAT--GCAGT----CG----TTGAG--AA------Cc----a---t---t-----g----------c-a--------------------------------------------
i Miniopterus_natalensis.LDJU01000022.1                 C 0 I 10
s Miniopterus_schreibersii.MinSch_scaffold_24116            32661 34 +     45743 GG-A-A-----------------------TCACTGAT--GCAGT----CG----TTGAG--AA------CC----A---T---T-----G----------C-A--------------------------------------------
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 I 10
s Miopithecus_ogouensis.k141_2666161                        33564 50 +     34273 AG-A-A-----------------------TGGTTGAA--ACTGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTGTT
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         9247 50 -    104932 CA-A-A-----------------------TCATTGAA--GCAAC----AA----TTGAG--CA------TC----A---A---A-----G----------A-A---T---------A-AGT---T-------T-T-TT---TCACTT
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     3669 49 +      8497 AG-A-A-----------------------ACATTGAA--ATAAC----AA----T-GAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTATT
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 144979 50 +    154973 AG-A-A-----------------------TCACTGAA--GCAGC----AT----TTGAG--AA------TT----A---C---C-----T----------T-A---T---------T-CTT---T-------T-T-TG---GCTATT
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                159745 36 +    265003 AG-A-A-----------------------TCATTGAA--GCAGT----AA----CTGAG--AA------CC----A---T---C-----T----------T-A---T---------T------------------------------
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 I 9
s Moschus_moschiferus.MosMos_scaffold_146101                 3161 39 -      4346 AG-A-A-----------------------TCATTGAA--GTGGC----AT----TTGAG--AA------AT----A---T---T-----T----------T-A---T---------T-CTT--------------------------
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 I 10
s Mungos_mungo.MunMun_flattened_line_8729                  142847 33 -    168139 AG-A-A-----------------------TCATTGAA--GCAGC----GA----CTGAA--AA------TC----A---A---A-----G----------A----------------------------------------------
i Mungos_mungo.MunMun_flattened_line_8729               C 0 I 9
s Murina_feae.MurFea_scaffold_2254                          17626 35 -    100666 AG-A-A-----------------------TCATT-AA--GCTGT----AA----TAGAG--AG------TC----A---T---C-----T----------T-A---T---------T------------------------------
i Murina_feae.MurFea_scaffold_2254                      C 0 I 9
s Mus_caroli.LT608236.1                                  70764497 17 +  92629107 ------------------------------------------------------------------------------------------------------t---t---------t-ctc---t-------t-t-tt---ggaaTT
i Mus_caroli.LT608236.1                                 I 5 C 0
s Mus_musculus.chr16                                     75487539 17 +  98207768 ------------------------------------------------------------------------------------------------------t---t---------t-ctc---t-------t-t-tt---ggaATT
i Mus_musculus.chr16                                    I 5 C 0
s Mus_spretus.CM004110.1                                 74328721 17 +  97876770 ------------------------------------------------------------------------------------------------------t---t---------t-ctc---t-------t-t-tt---ggaaTT
i Mus_spretus.CM004110.1                                I 5 C 0
s Mus_pahari.LT608305.1                                  67553706 28 +  89017189 aa-G-ATTATTAAAGTAACAccaggacttt---------------------------------------------------------------------------------------------------------------------
i Mus_pahari.LT608305.1                                 C 0 I 17
s Muscardinus_avellanarius.MusAve_scaffold_9643              9256 35 +     98495 AG-A-A-----------------------TCATTGAT--G----CAGCAA----TCATG--AA------TT----A---T---G-----T----------T-T---T----------------------------------------
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 I 9
s Mustela_putorius.JH417978.1                             4422103 50 -  28371801 ca-a-a-----------------------tcaCTGAA--GTAGC----AA----TTGAG--AA------TC----A---A---A-----G----------A-A---t---------a-aat---t-------c-t-tt---tcactt
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     88197 19 -    117718 -----------------------------------------------------------------------------------------C----------T-T---C---------C-CCC---T-------T-C-CT---GCCATT
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 9 C 0
s Myotis_brandtii.KE161952.1                               965949 36 +   8389877 AG-A-A-----------------------TCATTGAA--GCAGT----AA----TAGAG--AG------CC----A---T---C-----T----------T-A---T---------T------------------------------
i Myotis_brandtii.KE161952.1                            C 0 I 9
s Myotis_davidii.KB114863.1                               5017639 36 +   6462685 AG-A-A-----------------------TCATTGAA--GCAGT----AG----TAGAG--AG------CC----A---T---C-----T----------T-A---T---------T------------------------------
i Myotis_davidii.KB114863.1                             C 0 I 9
s Myotis_lucifugus.GL429887.1                             3463536 36 -   3747815 AG-A-A-----------------------TCATTGAA--GCAGT----AA----TAGAG--AG------CC----A---T---C-----T----------T-A---T---------T------------------------------
i Myotis_lucifugus.GL429887.1                           C 0 I 9
s Myotis_myotis.MyoMyo_scaffold_6123                         8730 36 +     66751 AG-A-A-----------------------TCATTGAA--GCAGT----AA----TAGAG--AG------CC----A---T---T-----T----------T-A---T---------T------------------------------
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 I 9
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3602 53 -      8794 AG-A-A-----------------------TAATCAAA--GCAGC----CA----TTAAG--AA------TC----A---C---A-----T----------T-A---T---------T-TCCAACT-------C-A-TT---TCTATG
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            108590 46 +    362372 AA-G-A-----------------------TTATTAAT--G--------TA----CCAAT--CA------AG----A---T---T-----T----------T-A---T---------T-CTC---T-------T-C-AT---GCTATC
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               5943 50 +     48152 AG-A-A-----------------------TGGTTGAA--ACTGC----AA----TTGAG--TA------TT----A---T---C-----T----------T-T---T---------C-CTC---T-------T-T-TT---GCTGTT
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4482841 50 -  14209539 ca-a-a-----------------------tcATTGAA--GCAGC----AA----TTGAG--CA------TC----A---A---A-----C----------A-A---T---------a-agt---t-------c-t-tt---tcactt
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3949592 50 -   4490290 AG-A-A-----------------------TCACTGAA--GCAGC----AT----TTGAG--AA------TT----A---C---C-----T----------T-A---T---------T-CTT---T-------T-T-TG---GCTATT
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  47863 25 +     94413 ------------------------------------A--GCAGG----AA----TTGAG--AA------CC----A---T---C-----T----------T-A---T---------T------------------------------
i Noctilio_leporinus.NocLep_scaffold_12062              I 3 I 9
s Nomascus_annamensis.k141_1439838                            816 41 +      3718 AG-A-A-----------------------TGGTTGAA--GCAGC----AG----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T--------------
i Nomascus_annamensis.k141_1439838                      C 0 C 0
s Nomascus_concolor.k141_49591                               1039 50 +      2014 AG-A-A-----------------------TGGTTGAA--GCAGC----AG----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTGTT
i Nomascus_concolor.k141_49591                          C 0 C 0
s Nomascus_gabriellae.k141_906566                            2367 50 -      2544 AG-A-A-----------------------TGGTTGAA--GCAGC----AG----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTGTT
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             22873 20 -  18771707 -----------------------------------------------------------------------------------C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTGTT
i Nomascus_siki_b.tarseq_80                         I 30 C 0
s Nomascus_siki_a.k141_595747                                   592 50 +      4512 AG-A-A-----------------------TGGTTGAA--GCAGC----AG----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTGTT
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                28286 50 +   3668941 ca-a-a-----------------------tcATTGAA--GCAGC----AA----CTGAG--AA------TC----A---A---A-----G----------A-A---T---------A-Agt---t-------c-t-tc---tcactt
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65565091 57 -  95554990 AG-A-A-----------------------ATTTTGAA--ATAGC----AA----TTGAG--AATGGCAGAT----C---T---A-----TT-T-------T-T---C---------T-CAA---T-------T-G-CT---ATTTC-
i Nycticebus_bengalensis.LG16                           I 34 I 288
s Nycticebus_coucang.k141_2051882                            4564  1 -      6470 A--------------------------------------------------------------------------------------------------------------------------------------------------
i Nycticebus_coucang.k141_2051882                       C 0 n 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65667461 57 +  89412551 AG-A-A-----------------------ATTTTGAA--ATAGC----AA----TTGAG--AATGGCAGAT----C---T---A-----TT-T-------T-T---C---------T-CAA---T-------T-G-CT---ATTTC-
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     I 34 I 266
s Ochotona_princeps.JH802095.1                            4994087 40 -  23139505 GG-A-G-----------------------ACATTGAG--GCCAC----AA----CTaaa--ac------tc----t---t---a--attt----------t-t---t---------t-c----------------------------
i Ochotona_princeps.JH802095.1                          C 0 I 11
s Octodon_degus.JH651621.1                                3683689 19 +  10294119 -----------------------------------------------------------------------------------------T----------T-T---C---------C-CTC---T-------T-T-CT---GCCATT
i Octodon_degus.JH651621.1                              I 9 C 0
s Odobenus_rosmarus.KB229369.1                             677489 50 -   3126709 ca-a-a-----------------------TCATTGAA--GCAGC----AA----TTAAG--CA------TC----A---A---A-----G----------A-A---T---------a-agt---t-------c-t-tt---tcactt
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1078289 39 +   1425656 AG-A-A-----------------------TCATTGAA--TTGGT----AT----TTAAG--AA------TT----A---C---C-----T----------T-A---T---------T-CAT--------------------------
i Odocoileus_virginianus.KZ101650.1                     C 0 I 10
s Okapia_johnstoni.LVCL01S0017931.1                         35584 39 +     78940 AG-A-A-----------------------TCATTGAA--GTGGC----AT----TTGAG--AA------TT----A---C---C-----T----------T-A---T---------T-CTT--------------------------
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 I 10
s Ondatra_zibethicus.OndZib_scaffold_6821                  123255 27 +    145789 AG-G-G-----------------------TTATTGAA--G--------TA----ACATC--CA------GC----A--TT-------------------------------------------------------------------
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 I 19
s Onychomys_torridus.OnyTor_scaffold_12578                  35011 46 +     62360 AG-A-A-----------------------TTACTGAA--G--------TA----ATATC--TA------GG----A---T---T-----T----------T-T---T---------T-CTC---T-------T-C-TC---AGAATT
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7223276 50 -   7562323 AG-A-A-----------------------TCACTGAA--GCAGC----AT----TTGAG--AA------TT----A---C---C-----T----------T-A---T---------T-CTT---T-------T-T-TG---GCTATT
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              41657 53 -     66828 AG-A-G-----------------------GAGCTGAA--GCAGC----AA----TTGAA--AG------TC----A---T---T-----T----------C-A---T---------T-CTCTTCT-------C-T-TT---TCTATT
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141873782 37 + 163896628 GG-A-G-----------------------TCATGGAC--ACAGC----AA----CTGag--aa------tc----a---t---a-----t----------t-t---t---------t-c----------------------------
i Oryctolagus_cuniculus.CM000803.1                      C 0 I 12
s Otocyon_megalotis.JAEUCK010005121.1                      305624 50 -    505867 CA-A-A-----------------------TAATTGAA--GCAGC----AA----CTGAG--AA------TC----A---A---A-----G----------A-A---T---------A-agt---t-------c-t-tc---tccctt
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       37090 52 +     38679 AG-A-A-----------------------ATTTTGAA--ATGGC----AA----TTGAG--AA------TT----C---T---C-----T----CT----T-T---T---------T-CTC---T-------T-C-CT---GTTTTT
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18006532 52 -  38779656 ag-a-a-----------------------attttgaa--atggc----AA----TTGag--aa------tt----c---t---c-----t--------ctt-t---t---------t-ctc---t-------t-c-ct---gttttt
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134075851 39 - 275406953 AG-A-A-----------------------TCATTGAA--GTGac----at----ttgag--aa------tt----a---t---t-----t----------t-a---t---------t-ctt--------------------------
i Ovis_aries.CM001582.2                                 C 0 I 10
s Ovis_canadensis.OviCan_scaffold_6251                      77065 39 +    140051 AG-A-A-----------------------TCATTGAA--GTGAC----AT----TTGAG--AA------TT----A---T---T-----T----------T-A---T---------T-CTT--------------------------
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 I 10
s Pan_paniscus.CM003386.1                               127572592 50 - 205426864 AG-A-A-----------------------TGGTTGAA--GCAAC----AG----TTGAG--Aa------tt----a---c---c-----t----------t-t---t---------t-ctc---t-------t-t-tt---gctgtt
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.KZ622857.1                               325579 50 +    772158 AG-A-A-----------------------TGGTTGAA--GCAGC----AG----TTGAg--aa------tt----a---t---c-----t----------t-t---t---------t-ctc---t-------t-t-tt---gctgtt
i Pan_troglodytes.KZ622857.1                            I 19 I 37
s Panthera_onca.PanOnc_flattened_line_1615                  32308 48 +    295523 AG-A-A-----------------------TAATTGAA--ACAGC----AA----CTGAA--AA------TC----A---A---A-----G----------A-A---C---------A-AGT---T-------A-T-TT---TA--TT
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3636042 48 +  18214204 AG-A-A-----------------------TAATTGAA--ACAGC----AA----CTGAA--AA------TC----A---A---A-----g----------a-a---c---------a-agt---t-------a-t-tt---ta--tt
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5025689 48 -   6340057 ag-a-a-----------------------taaTTGAA--ACAGC----AA----CTGAA--AA------TC----A---A---A-----g----------a-a---c---------a-agt---t-------a-t-tt---ta--tt
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1064712 39 -   1292953 AG-A-A-----------------------TCATTGAA--GTGGc----at----ttgag--aa------tt----a---t---t-----t----------t-a---t---------t-ctt--------------------------
i Pantholops_hodgsonii.KE114631.1                       C 0 I 10
s Papio_anubis.CM001492.2                               188153691 50 - 188283584 AG-A-A-----------------------TGGTTGAA--ACTGC----AA----TTGAg--aa------tt----a---t---c-----t----------t-t---t---------t-ctc---t-------t-t-tt---gctgtt
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            49903 50 +     76494 AG-A-A-----------------------TGGTTGAA--ACTGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCCGTT
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47511088 50 +  47705337 AG-A-A-----------------------TGGTTGAA--ACTGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTGTT
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 65065 50 -    104429 AG-A-A-----------------------TGGTTGAA--ACTGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCCGTT
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  14856 50 -     29451 AG-A-A-----------------------TGGTTGAA--ACTGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTGTT
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                35259 50 +     35859 AG-A-A-----------------------TGGTTGAA--ACTGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCCGTT
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113608 45 -    135482 AG-A-A-----------------------TCATTGAA--GCAGC----AA----CTGAA--AA------TC----A---A---A-----G----------A-A---T---------A-AGT---T-------C-T-TT---A-----
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           3140 44 -     23713 AG-A-A-----------------------ATTTTGAA--ATAGC----GA----TTGAG--AA------AT----A---T---C-----GTATTCTCTTTT-T--------------------------------------------
i Perodicticus_ibeanus.k141_117958                      C 0 I 6
s Perodicticus_potto.k141_713187                            22439 43 -     27972 AG-A-A-----------------------ATTTTGAA--ATAGC----GA----TTGAG---A------AT----A---T---C-----GTTTTCTCTTTT-T--------------------------------------------
i Perodicticus_potto.k141_713187                        C 0 I 6
s Perognathus_longimembris.PerPac_flattened_line_22291      41054 27 -     45160 TT-G-G-----------------------TCATTGTA--G--------CAGCCATCAAT--AA------A-----------------------------------------------------------------------------
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4948188 49 -   8017169 AG-T-A-----------------------TTACTGAA--G--------TA----ACATC--CA------GG----acgtt---t-----t----------t-t---t---------t-ctc---t-------t-c-tc---agaatt
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    10382 19 -     36578 -----------------------------------------------------------------------------------------T----------T-T---T---------C-CTC---T-------T-T-CT---GCTATT
i Petromus_typicus.PetTyp_scaffold_33007                I 9 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            119893 50 -    122454 AG-A-A-----------------------TCACTGAA--GCAGC----AT----TTGAG--AA------TT----A---C---C-----T----------T-A---T---------T-CTT---T-------T-T-TG---GCTATT
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           2949 50 -      3310 AG-A-A-----------------------TGGTTGAA--ACTGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------G-CTT---T-------T-T-TT---GCTGTT
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       22854 50 -     82327 AG-A-A-----------------------TGGTTGAA--ACTGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------C-CTT---T-------T-T-TT---GCTGTT
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           19601 50 +     19957 AG-A-A-----------------------TGGTTGAA--ACTGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------C-CTT---T-------T-T-TT---GCTGTT
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26737615 50 +  26888534 AG-A-A-----------------------TGGTTGAA--ACTGC----AA----TTGag--aa------tt----a---t---c-----t----------t-t---t---------c-ctt---t-------t-t-tt---gctgtT
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            95399 29 +    112873 AG-A-A-----------------------TCATTGAA--ACAGT----AA----TTGGT--AT------TG----A-----------------------------------------------------------------------
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 I 13
s Pithecia_albicans.k141_991845                             41592 50 -     61926 AG-A-A-----------------------TGGCTGAA--GCAGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GATGTT
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        23021 50 +     78826 AG-A-A-----------------------TGGTTGAA--GCAGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GATGTT
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              6972 50 -     15800 AG-A-A-----------------------TGGTTGAA--GCAGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GATGTT
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        10170 50 -     16101 AG-A-A-----------------------TGGTTGAA--GCAGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GATGTT
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          3479 50 +      9673 AG-A-A-----------------------TGGTTGAA--GCAGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GATGTT
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13472473 50 -  19735023 AG-A-A-----------------------TGGTTGAA--GCAGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GATGTT
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           11381 50 -     31692 AG-A-A-----------------------TGGTTGAA--GCAGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GATGTT
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           3959 50 +     21690 AG-A-A-----------------------TCATTGAA--GCAGC----AT----TTGAG--AA------TT----A---C---C-----T----------T-A---T---------T-CTT---T-------T-T-TG---GCTATT
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       20817 50 +     44506 AG-A-A-----------------------TGGTTGAG--GTAGC----AA----CTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GACGTT
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        21027 50 +     67491 AG-A-A-----------------------TGGTTGAG--GTAGC----AA----CTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GACGTT
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      11268 50 -     98129 AG-A-A-----------------------TGGTTGAG--GTAGC----AA----CTGAG--AA------TT----A---T---C-----C----------T-T---T---------T-CTC---T-------T-T-TT---GACGTT
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     20873 50 +    147771 AG-A-A-----------------------TGGTTGAG--GTAGC----AA----CTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GGCGTT
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        21123 50 -     23762 AG-A-A-----------------------TGGTTGAG--GTAGC----AA----CTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GACGTT
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          1589 50 -     55515 AG-A-A-----------------------TGGTTGAG--GTAGC----AA----CTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GACGTT
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         20942 50 +    152463 AG-A-A-----------------------TGGTTGAG--GTAGC----AA----CTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GACGTT
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      7702 50 +      8943 AG-A-A-----------------------TGGTTGAG--GTAGC----AA----CTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GACGTT
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                         10662 50 +    134592 AG-A-A-----------------------TGGTTGAG--GTAGC----AA----CTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GACGTT
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          21252 50 -     75465 AG-A-A-----------------------TGGTTGAG--GTAGC----AA----CTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GACGTT
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              185140 50 -    373494 AG-A-A-----------------------TGGTTGAA--GCAGC----AG----TTGAg--aa------tt----a---t---c-----t----------t-t---t---------t-ctc---t-------t-t-tt---gctgtt
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19805048 50 +  19899266 AG-A-A-----------------------TGGTTGAA--GCAGC----AG----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTGTT
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               3183 50 -     15069 AG-A-A-----------------------TGGTTGAA--ACTGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTGTT
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              3317 50 +     14865 AG-A-A-----------------------TGGTTGAA--ACTGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTGTT
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                74487 54 +     78963 CG-A-A-----------------------GAGTTGAA--GTAGC----CA----TCGAA--AG------TC----A---C---TT----T----------C-A---T---------T-CTCTTCC-------C-T-TT---TCTATT
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6846524 50 +  12164890 AG-A-A-----------------------ACATTGAA--ATAGC----AA----TTGag--aa------tt----a---t---c-----t----------t-t---t---------t-ctc---t-------t-t-tt---gctatt
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    665141 50 -   2312742 NN-N-N-----------------------NNNNNNNN--NNNNN----NN----NNNNN--NN------NN----N---N---N-----N----------N-N---N---------N-NNN---N-------N-N-NN---NNNNNN
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         1666 50 +     11805 AG-A-A-----------------------ACATTGAA--ATAGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTATT
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           41001 50 +     52369 AG-A-A-----------------------ACATTGAA--ATAGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTATT
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         33390 50 -     44753 AG-A-A-----------------------ACATTGAA--ATAGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTGTT
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            15311 50 +     27322 AG-A-A-----------------------ACATTGAA--ATAGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTGTT
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       14950 50 -     53241 AG-A-A-----------------------ACATTGAA--ATAGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTATT
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         37221 50 -     48185 AG-A-A-----------------------ACATTGAA--ATAGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTATT
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           31618 28 +     77221 AG-G-A-----------------------TTATTTAA--G--------TA----ACAAC--Ca------gg----a--at---t---------------------------------------------------------------
i Psammomys_obesus.NESX01026517.1                       C 0 I 19
s Pteronotus_parnellii.KE867983.1                            2414 36 -     27784 AG-A-A-----------------------TCATTGGA--GCAGT----AA----CTGAG--AA------CC----A---T---C-----T----------T-G---T---------T------------------------------
i Pteronotus_parnellii.KE867983.1                       C 0 I 9
s Pteronura_brasiliensis.PteBra_flattened_line_1343        244197 50 -    344369 CA-A-A-----------------------TCATTGAA--GTGGC----AA----TTGAG--AA------TC----A---A---A-----G----------A-A---T---------A-AAT---T-------C-T-TT---TCACTT
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13244544 36 -  17261082 AG-A-A-----------------------TCATTGAA--GCAGC----AA----TTGAG--AA------GC----a---t---c-----t----------t-a---t---------t------------------------------
i Pteropus_alecto.KB031157.1                            C 0 I 9
s Pteropus_vampyrus.KN525959.1                             602494 36 -   3946241 AA-A-A-----------------------TCATTGAA--GCAGC----AA----TTGAG--AA------GC----a---t---c-----t----------t-a---t---------t------------------------------
i Pteropus_vampyrus.KN525959.1                          C 0 I 9
s Puma_concolor.QAVW01000427.1                          131532272 48 - 161321710 ag-a-a-----------------------taaTTGAA--ACAGC----AA----CTGAA--AA------TC----A---A---A-----g----------a-a---c---------a-agt---t-------a-t-tt---ta--tt
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             27312 50 +     56732 AG-A-A-----------------------TGGTTGAA--ACTGC----AG----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTGTT
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6803803 50 +   6970761 AG-A-A-----------------------TGGTTGAA--ACTGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTGTT
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             3196 50 +     18040 AG-A-A-----------------------TGGTTGAA--ACTGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTGTT
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                14367 39 +     68503 AG-A-A-----------------------TCATTGAA--TTGGC----AT----TTGAG--AA------TT----A---C---C-----T----------T-A---T---------T-CAT--------------------------
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 I 9
s Rattus_norvegicus.chr11                                13913598 12 +  90463843 ------------------------------------------------------------------------------------------------------------------------t---t-------t-c-tc---ggAATG
i Rattus_norvegicus.chr11                               I 8 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1786357 36 +   2252614 AG-A-A-----------------------TTATTGAA--GCAGC----AA----CTGAG--AA------TC----A---T---G-----T----------T-A---T---------T------------------------------
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 I 13
s Rhinopithecus_bieti.k119_102124                           13749 50 -     14454 AG-A-A-----------------------TGGTTGAA--ACTGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTGTT
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206375075 50 - 206558726 AG-A-A-----------------------TGGTTGAA--ACTGC----AA----TTGAg--aa------tt----a---t---c-----t----------t-t---t---------t-ctc---t-------t-t-tt---gctgtt
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44853975 50 -  45163003 AG-A-A-----------------------TGGTTGAA--ACTGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTGTT
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                17834 36 +    109198 AG-A-A-----------------------TCATTGAA--ACAAC----AA----TTGAG--AA------AC----A---T---C-----T----------T-A---T---------T------------------------------
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 I 9
s Saiga_tatarica.SaiTat_scaffold_82192                       6168 39 +     12214 AG-A-A-----------------------TCACTGAA--GGGGC----AT----TTGAG--AA------TT----A---T---T-----T----------T-A---T---------T-CTT--------------------------
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 I 10
s Saimiri_boliviensis.NW_024100938.1                     15670697 31 -  43202129 AG-A-A-----------------------TGGTTGAC--GCAGC----AA----TTGag--aa------tt----a---t---c---------------------------------------------------------------
i Saimiri_boliviensis.NW_024100938.1                    C 0 I 17
s Saimiri_cassiquiarensis.k141_808270                        2563 31 +     34089 AG-A-A-----------------------TGGTTGAC--GCAGC----AA----TTGAG--AA------TT----A---T---C---------------------------------------------------------------
i Saimiri_cassiquiarensis.k141_808270                   C 0 I 17
s Saimiri_macrodon.k141_2087127                              2504 31 -     60842 AG-A-A-----------------------TGGTTGAC--GCAGC----AA----TTGAG--AA------TT----A---T---C---------------------------------------------------------------
i Saimiri_macrodon.k141_2087127                         C 0 I 17
s Saimiri_oerstedii.k141_841116                              2599 31 +     67014 AG-A-A-----------------------TGGTTGAC--ACAGC----AA----TTGAG--AA------TT----A---T---C---------------------------------------------------------------
i Saimiri_oerstedii.k141_841116                         C 0 I 17
s Saimiri_sciureus.k141_1947592                              2577 31 +     60816 AG-A-A-----------------------TGGTTGAC--GCAGC----AA----TTGAG--AA------TT----A---T---C---------------------------------------------------------------
i Saimiri_sciureus.k141_1947592                         C 0 I 17
s Saimiri_ustus.k141_1282476                                 2514 31 -     76454 AG-A-A-----------------------TGGTTGAC--GCAGC----AA----TTGAG--AA------TT----A---T---C---------------------------------------------------------------
i Saimiri_ustus.k141_1282476                            C 0 I 17
s Sapajus_apella.ctg10                                   17339264 50 -  30362882 AG-A-A-----------------------TGGTTGAA--GCAGC----AA----TTGAG--AA------TT----A---T---C-----C----------T-T---T---------T-CTC---T-------T-T-TT---AATGTT
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         18639 50 -     62485 AG-A-A-----------------------TGGTTGAA--GCAGC----AA----TTGAG--AA------TT----A---T---C-----C----------T-T---T---------T-CTC---T-------T-T-TT---AATGTT
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   29918 20 -    114521 AG-A-C-----------------------TCATTGAAGAGCAGA----A--------------------------------------------------------------------------------------------------
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 I 34
s Semnopithecus_entellus.k141_1527475                       25737 50 +     26421 AG-A-A-----------------------TGGTTGAA--ACTGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CCC---T-------T-T-TT---GCTGTT
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       6197 50 +     20762 AG-A-A-----------------------TGGTTGAA--ACTGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CCC---T-------T-T-TT---GCTGTT
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         39932 50 +     40653 AG-A-A-----------------------TTGTTGAA--ACTGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CCC---T-------T-T-TT---GCTGTT
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                           10489 50 -     12194 AG-A-A-----------------------TGGTTGAA--ACTGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CCC---T-------T-T-TT---GCTGTT
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     23911 50 -     27512 AG-A-A-----------------------TGGTTGAA--ACTGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CCC---T-------T-T-TT---GCTGTT
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         32930 50 -     33692 AG-A-A-----------------------TGGTTGAA--ACTGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CCC---T-------T-T-TT---GCTGTT
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   97812 21 -    120886 -------------------------------------------------------------------------------T---C-----T----------T-T---T---------T-CTC---T-------T-C-TC---AGAATA
i Sigmodon_hispidus.SigHis_scaffold_11332               I 24 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            16557 52 +    739146 AG-A-A-----------------------TCATTAAAGAACAGC----CA----TTGAG--AA------TT----T---T---C-----T----------T-A---T---------T-CTC---T-------C-T-TT---GCTATT
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17748812  5 -  27805282 ------------------------------------------------------------------------------------------------------------------------------------N-N-NN---N-----
i Sorex_araneus.JH798170.1                              I 39 I 583
s Spermophilus_dauricus.KZ294190.1                        2238053 33 +   2842873 AG-A-A-----------------------TCATTGAA--G----CTGCAG----TCAag--aa------tc----a---t---t-----t----------t----------------------------------------------
i Spermophilus_dauricus.KZ294190.1                      C 0 I 14
s Spilogale_gracilis.SpiGra_flattened_line_905             232954 50 -    276980 CA-A-A-----------------------TCATTGAA--GCGGC----AA----TTGAT--AA------TC----A---A---A-----G----------A-A---C---------A-AGT---T-------C-T-TT---TCACTT
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            25515 33 +     62062 AG-A-A-----------------------TCATTGAA--GCAGC----AA----CTGAA--AA------TC----A---A---A-----G----------A----------------------------------------------
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 I 9
s Sus_scrofa.CM000824.4                                 189270418 50 + 218635234 AG-A-A-----------------------TCATTGAA--GCAGA----AA----CTGAg--aa------tt----a---t---c-----t----------t-a---t---------t-ctt---t-------t-t-tg---gctatt
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        12866 55 -  13920577 AG-A-A-----------------------TGGTTGAA--GCAGC----AG----TTGAG--AA------TT----A---T---CTATTTT----------T-T---A---------T-CTC---T-------T-T-TT---GCTGTT
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_148405               4180 36 -      6063 AG-A-A-----------------------TCATTGAA--GCAGT----AA----TTGAG--AA------CC----A---T---C-----T----------T-A---A---------T------------------------------
i Tadarida_brasiliensis.TadBra_scaffold_148405          I 99 I 51
s Tamandua_tetradactyla.TamTet_scaffold_26877               13278 53 +     45698 AG-A-A-----------------------TAATCAAA--GCAGC----AA----TTAAG--AA------TC----A---C---A-----T----------T-A---T---------T-CTCAACT-------C-A-TT---TCTGTG
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      805284 50 +   1148477 AG-A-G-----------------------CCATTGAA--GTAGC----AA----TTGAG--AA------TC----A---T---C-----T----------T-A---T---------T-CTC---T-------T-T-CT---GCTATT
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  55944 50 +     99546 AG-A-A-----------------------CCATTGAA--GTAGC----AA----TTGAG--AA------TC----A---T---C-----T----------T-A---T---------T-CTC---T-------T-T-CT---GTTATT
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               24584 46 +     42269 AG-A-G-----------------------TCATCGAG--GCAGC----AA----TCAAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-G-TT-------TT
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               57900 46 +     65473 AG-A-G-----------------------TCATCGAG--GCAGC----AA----TCAAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-G-TT-------TT
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194005227 50 - 194193292 AG-A-A-----------------------TGGTTGAA--ACTGC----AA----TTGAg--aa------tt----a---t---c-----t----------t-t---t---------t-ctc---t-------t-t-tt---gccgtT
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             37443 19 -     47444 -----------------------------------------------------------------------------------------T----------T-T---T---------C-CTC---T-------T-T-CA---TCCGTT
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         I 9 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  2154 49 +      6782 AG-A-A-----------------------TA----TA--ACAGC----AA----TTAAG--AA------TC----A---T---G-----T----------T-C---T---------T-GTCTTCT-------C-A-TT---TCTATC
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  134423 36 -    259118 AG-A-A-----------------------TCACTGAA--GCAGT----GA----CTGAA--AA------CC----A---T---G-----T----------T-C---T---------T------------------------------
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 I 9
s Trachypithecus_auratus.k141_738098                        24307 50 +     38948 AG-A-A-----------------------TGGTTGAA--ACTGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CCC---T-------T-T-TT---GCTGTT
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   18034 50 -     32910 AG-A-A-----------------------TGGTTGAA--ACTGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---C---------T-CCC---T-------T-T-TT---GCTGTT
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       23932 50 +     24652 AG-A-A-----------------------TGGTTGAA--ACTGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CCC---T-------T-T-TT---GCTGTT
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      2810 50 -      3559 AG-A-A-----------------------TGGTTGAA--ACTGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---C---------T-CCC---T-------T-T-TT---GCTGTT
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           40754 50 -     54611 AG-A-A-----------------------TGGTTGAA--ACTGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CCC---T-------T-T-GT---GCTGTT
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       16755 50 +     17312 AG-A-A-----------------------TGGTTGAA--ACTGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CCC---T-------T-T-TT---GCTGTT
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    24118 50 -     25040 AG-A-A-----------------------TGGTTGAA--ACTGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---C---------T-CCC---T-------T-T-TT---GCTGTT
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          2779 50 +      3528 AG-A-A-----------------------TGGTTGAA--ACTGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---C---------T-CCC---T-------T-T-TT---GCTGTT
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  49146 50 +     51589 AG-A-A-----------------------TGGTTGAA--ACTGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---C---------T-CCC---T-------T-T-TT---GCTGTT
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       12322 50 +     14732 AG-A-A-----------------------TGGTTGAA--ACTGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---C---------T-CCC---T-------T-T-TT---GCTGTT
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       2799 50 -     28054 AG-A-A-----------------------TGGTTGAA--ACTGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---C---------T-CCC---T-------T-T-TT---GCTGTT
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44657594 50 -  44834318 AG-A-A-----------------------TGGTTGAA--ACTGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---C---------T-CCC---T-------T-T-TT---GCTGTT
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        2603 50 +      3372 AG-A-A-----------------------TGGTTGAA--ACTGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CCC---T-------T-T-GT---GCTGTT
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   3766 50 +     90398 AG-A-A-----------------------TCATCAAA--GTGGC----AT----TTGAG--AA------TT----A---C---C-----T----------G-T---T---------T-TTT---T-------T-T-CC---ACTATT
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16079866 54 +  31416278 AG-A-A-----------------------TAGTTGAA--GCAGC----AA----TTGAA--Ag------tc----a---t---t----tt----------c-a---t---------t-ctcttct-------c-t-tt---tctctt
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2790516 48 -   3938065 AG-A-A-----------------------TCATTGAA--ATAGC----AA----TCAAg--aa------tc----a---t---c-----t----------t-t---t---------t-ctc---t-------t-t-t-----ctaat
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    3040 48 +     13056 AG-A-A-----------------------TCATTGAC--ATAGC----AA----TCAAG--AA------TC----T---T---T-----G----------T-T---T---------T-CTC---T-------T-T-C-----CTAAT
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69311993 50 -  96451834 AG-A-A-----------------------TCACTGAA--GCAGC----AT----TTGAG--AA------TT----A---C---C-----T----------T-A---T---------T-CTT---T-------T-T-TG---GCTATT
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 25117 52 -     25548 AG-A-C-----------------------TCATTGAAGAGCAGA----AA----CTAAG--AA------TT----G---T---T-----T----------T-A---T---------T-CAC---T-------T-T-CT---GTTATT
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6512758 49 +  28682327 ga-a-a-----------------------tcaTTGAA--GTA-C----AA----TTGAG--AA------TC----A---A---A-----A----------A-G---t---------a-aat---t-------c-t-tt---tcactt
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  3365 50 -     20643 AG-A-A-----------------------ACATTGAA--ATGGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTATT
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             22909 50 -     33872 AG-A-A-----------------------ACATTGAA--ATGGC----AA----TTGAG--AA------TT----A---T---C-----T----------T-T---T---------T-CTC---T-------T-T-TT---GCTATT
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1523226 51 -   2331223 AG-AAA-----------------------TCACTGAA--GCAGC----AA----TTGAG--AA------TT----A---T---C-----C----------T-G---T---------T-CTT---T-------T-T-TG---GATGTT
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                135693 50 -    281493 CA-A-A-----------------------TCATTGAA--GCAGC----AA----CTGAG--AA------TC----A---A---A-----G----------A-A---T---------A-AGT---T-------C-T-TC---TCACTT
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       125150 33 -    134049 AG-A-A-----------------------TTATTGAA--G----CTGCAA----TCAAG--AA------TC----G---T---A-----T----------T----------------------------------------------
i Xerus_inauris.XerIna_scaffold_7898                    C 0 I 14
s Zalophus_californianus.ZalCal_flattened_line_4097        212224 50 -    227762 CA-A-A-----------------------TCATTGAA--GCAGC----AA----TTAAA--CA------TC----A---A---A-----G----------A-A---T---------A-AGT---T-------C-T-TT---TCACTT
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     13381 52 -     20485 AG-A-A-----------------------TTTTTGAA--G--------CA----GTGGT--CA------CGAATTA-TCT---T-----T----------T-T---T---------A-CTC---T-------C-A-AT---ACTGTT
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 I 1
s Ziphius_cavirostris.ZipCav_flattened_line_127025           5490 50 -      8775 AG-A-A-----------------------TCACTGAA--GCAGC----AT----TTGAG--AA------TT----A---C---C-----T----------T-A---T---------T-CGT---T-------T-T-TG---GCTATT
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_141308              7099  0 -     12508 C
e Mesoplodon_bidens.MesBid_scaffold_183284                   2166 255 +      2166 T
e Macaca_tonkeana.k141_2870633                               2864 158 -     27140 T
e Macaca_nigra.k141_282495                                   2859 158 -     46448 T
e Macaca_maura.k141_251854                                  43912 158 -     79256 T

a score=0.000000
s hg38.chr4_GL000008v2_random                                9900 11 +    209709 CT--------------T----A-----CAAGGA---------C
s Acinonyx_jubatus.LLWD01000356.1                         2031979 11 +   3721120 tt--------------tt---t-----aaaac----------a
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    110653  6 -    189883 AC--------------T----A---------AA----------
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 22 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10655322 12 +  23371972 tt--------------tt---t--aaccAA------------A
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7092039 14 -  16596857 t---------------tt---a--aacaaaaca---------a
i Ailurus_fulgens.LNAC01000003.1                        C 0 I 206
s Allactaga_bullata.AllBul_scaffold_70162                   10979  7 -     22067 ---------------------------CTTAGA---------A
i Allactaga_bullata.AllBul_scaffold_70162               I 18 C 0
s Allenopithecus_nigroviridis.k141_3103707                  60917 11 +     61638 CT--------------T----A-----CAAGGG---------C
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        52725 11 +     53391 CT--------------T----A-----CAAGGG---------C
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         3450 11 +     72529 CT--------------T----A-----CAAGGG---------C
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          3025 11 +      3797 CT--------------T----A-----CAAGGG---------C
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             8198 11 -     18050 CT--------------T----A-----CAAGGA---------C
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  9311 11 -     11521 CT--------------T----A-----CAAGGA---------C
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              8875 11 -     21359 CT--------------T----A-----CAAGGA---------C
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_298055                                  166 11 +      1823 CT--------------T----A-----CAAGGA---------C
i Alouatta_juara.k141_298055                            C 0 C 0
s Alouatta_macconnelli.k141_1331706                          8166 11 -     10438 CT--------------T----A-----CAAGGA---------C
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            4822 11 +      7047 CT--------------T----A-----CAAGGA---------C
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             8108 11 +     10410 CT--------------T----A-----CAAGGA---------C
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            1911 11 -      4927 CT--------------T----A-----CAAGGA---------C
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             4841 11 +      6429 CT--------------T----A-----CAAGGA---------C
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3518759 12 +   4113121 CC--------------T---TA-----CATGGA---------A
i Ammotragus_lervia.NIVO01013474.1                      I 10 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      388908 12 -    631301 CT--------------T---GA-----CAAAGA---------C
i Anoura_caudifer.AnoCau_scaffold_422                   I 9 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            29345 12 +     33004 CC--------------T---TA-----CATGGA---------A
i Antilocapra_americana.AntAmePen_scaffold_42841        I 10 C 0
s Aotus_azarae.k141_3170768                                 60559 11 +     78111 CT--------------T----A-----CAAGGA---------C
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            3500 11 +     22701 CT--------------T----A-----CAAGGA---------C
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5747457 11 +   9889416 CT--------------T----A-----CAAGGA---------c
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             4042 11 -    104377 CT--------------T----A-----CAAGGA---------C
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               4048 11 +     23246 CT--------------T----A-----CAAGGA---------C
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     2052 11 +      5067 CT--------------T----A-----TAAAGA---------C
i Aplodontia_rufa.AprRuf_scaffold_156013                I 14 C 0
s Arctocebus_calabarensis.k141_1161114                      15989 11 +     17483 CT--------------T----G-----CAAGGA---------T
i Arctocebus_calabarensis.k141_1161114                  I 6 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 7304 12 -     29036 CT--------------C---TG-----CAAGGA---------C
i Artibeus_jamaicensis.ArtJam_scaffold_41619            I 9 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9537292 11 +  39197703 CT--------------T----A-----CAAGGG---------C
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             58576 11 +     85812 CT--------------T----A-----CAAGGG---------C
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 9575 11 +     89302 CT--------------T----A-----CAAGGG---------C
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             14080 11 -     58268 CT--------------T----A-----CAAGGG---------C
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             62071 11 +    119057 CT--------------T----A-----CAAGGG---------C
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               4040 11 -     25888 CT--------------T----A-----CAAGGG---------C
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 4790 11 -     16375 CT--------------T----A-----CAAGGG---------C
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              1110 11 +      2719 CT--------------T----A-----CAAGGG---------C
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26378760 12 +  51448160 CT--------------T---TA-----CATGGA---------A
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        3992 12 -     13118 CT--------------T---TA-----CATGGA---------A
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   41826 12 -     72089 CC--------------T---TA-----CATGGA---------A
i Beatragus_hunteri.BeaHun_scaffold_21644               I 10 C 0
s Bison_bison.KN264915.1                                  6557852 12 +   6870073 CC--------------T---TA-----CATGGA---------A
i Bison_bison.KN264915.1                                I 10 C 0
s Bos_indicus.CM003021.1                                138138091 12 - 161108492 CC--------------T---TA-----CATGGA---------A
i Bos_indicus.CM003021.1                                I 10 C 0
s Bos_mutus.JH883513.1                                     570465 12 -    998990 CC--------------T---TA-----CATGGA---------A
i Bos_mutus.JH883513.1                                  I 10 C 0
s Bos_taurus.CM000177.6                                 136293824 12 - 158972876 CC--------------T---TA-----CATGGA---------A
i Bos_taurus.CM000177.6                                 I 10 C 0
s Bubalus_bubalis.KI419065.1                              1229580 12 -   1914593 CC--------------T---TA-----CATGAA---------A
i Bubalus_bubalis.KI419065.1                            I 10 C 0
s Cacajao_ayresi.k141_724503                               111933 11 -    171031 CT--------------T----A-----CAAGGA---------C
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 10959 11 +    125063 CT--------------T----A-----CAAGGA---------C
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                13007 11 -    216513 CT--------------T----A-----CAAGGA---------C
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        5547 11 -    134917 CT--------------T----A-----CAAGGA---------C
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3218168 12 -   8989139 CT--------------T---TA-----CATGGA---------A
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           395873 12 -  15254737 CT--------------T---TA-----CATGGA---------A
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2971606 12 +   6889770 CT--------------T---TA-----CATGGA---------A
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11516697 16 +  39901454 TT--------------T---TT-TAACAAAATA---------A
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   11715 16 +     87036 TT--------------T---TT-TAACAAAATA---------A
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11263358 16 -  35597290 tt--------------tt---t-taacaaaata---------a
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11085887 16 +  39895921 tt--------------tt---t-taacaaaata---------a
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16452911 16 -  44759192 tt--------------tt---t-taacaaaata---------a
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21323835 12 + 157394656 CC--------------T---TA-----CATGGA---------A
i Capra_aegagrus.CM003214.1                             I 10 C 0
s Capra_hircus.CM004562.1                               135705062 12 - 157403528 CC--------------T---TA-----CATGGA---------A
i Capra_hircus.CM004562.1                               I 10 C 0
s Capromys_pilorides.CapPil_scaffold_979108                   149 10 -      1248 AT--------------T----A-----CAAAAA----------
i Capromys_pilorides.CapPil_scaffold_979108             C 0 C 0
s Carlito_syrichta.NW_007248099.1                          307147 11 +    345090 tt--------------t----a-----cAAGGA---------C
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               58100 12 +     67245 CT--------------C---TA-----CAAGGA---------C
i Carollia_perspicillata.CarPer_scaffold_4436           I 9 C 0
s Castor_canadensis.CasCan_scaffold_47037                   28591 11 +     33760 CT--------------T----A-----CAAAGT---------C
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   157388  5 -    276539 -----------------------------TTTA---------A
i Catagonus_wagneri.CatWag_scaffold_1305                I 12 C 0
s Cavia_aperea.AVPZ01000278.1                            15784751 11 -  24422027 ct--------------T----A-----CAAAAA---------C
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15796683 11 -  24440124 ct--------------t----A-----CAAAAA---------C
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       174874 11 +    436027 CT--------------T----A-----CAAAAA---------C
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18888786 11 -  29618158 CT--------------T----A-----CAAGGA---------C
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 6330 11 -     26817 CT--------------T----A-----CAAGGA---------C
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                10570 11 +     25043 CT--------------T----A-----CAAGGA---------C
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         6180 11 +     21754 TT--------------T----A-----CAAGGA---------C
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4362476 12 +   7569818 GT--------------T---TA-----CAGAGA---------c
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         2228 12 -      9338 GT--------------T---TA-----CAGAGA---------C
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6552709 11 +   6739814 CT--------------T----A-----CAAGGA---------C
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      54186 11 -     54931 CT--------------T----A-----CAAGGA---------C
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         19170 11 -     19697 CT--------------T----A-----CAAGGA---------C
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         56701 11 -    107033 CT--------------T----A-----CAAGGA---------C
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        3141 11 -      3853 CT--------------T----A-----CAAGGG---------C
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          27077 11 +     30494 CT--------------T----A-----CAAGGG---------C
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           3101 11 -      4022 CT--------------T----A-----CAAGGG---------C
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          2995 11 -      3505 CT--------------T----A-----CAAGGG---------C
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           21783 11 +     35983 CT--------------T----A-----CAAGGG---------C
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11988320 11 +  12117833 CT--------------T----A-----CAAGGG---------C
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46475073 11 +  46592721 CT--------------T----A-----CAAGGG---------C
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      32902 11 +     33420 CT--------------T----A-----CAAGGG---------C
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        2936 11 -      3443 CT--------------T----A-----CAAGGG---------C
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      3929 11 -      4669 CT--------------T----A-----CAAGGG---------C
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        3722 11 -      4411 CT--------------T----A-----CAAGGG---------C
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         3252 11 -      4205 CT--------------T----A-----CAAGGG---------C
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_1070855          1470 12 -      1715 CT--------------T---TA-----GAAcaa---------g
i Chaetophractus_vellerosus.ChaVel_scaffold_1070855     I 13 C 0
s Cheirogaleus_major.k141_1157592                           57096 11 -     68416 CT--------------T----A-----CAAGGA---------C
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            6138 11 +     13308 CT--------------T----A-----CATGGA---------C
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             3595 11 -     18223 CT--------------T----A-----CAAGGA---------C
i Cheracebus_lucifer.k141_619653                        I 8 C 0
s Cheracebus_lugens.k141_203936                             20618 11 +     25473 CT--------------T----A-----CAAGGA---------C
i Cheracebus_lugens.k141_203936                         I 8 C 0
s Cheracebus_regulus.k141_2128895                           39657 11 +     57117 CT--------------T----A-----CAAGGA---------C
i Cheracebus_regulus.k141_2128895                       I 8 C 0
s Cheracebus_torquatus.k141_315545                          44332 11 +     54541 CT--------------T----A-----CAAGGA---------C
i Cheracebus_torquatus.k141_315545                      I 8 C 0
s Chinchilla_lanigera.JH721867.1                         15959917 11 +  43084221 CT--------------T----a-----caaaaa---------t
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         69155 11 +    196370 CT--------------T----A-----CAAGGA---------C
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          13335 11 +     40510 CT--------------T----A-----CAAGGA---------C
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15136536 11 -  15256731 CT--------------T----A-----CAAGGG---------C
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      31582 11 -     53260 CT--------------T----A-----CAAGGG---------C
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101142031 11 + 101219884 CT--------------T----A-----CAAGGG---------C
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                15057 12 -     21363 CT--------------T---TA-----CAAGGA---------C
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           760368 12 +    964067 CT--------------T---TA-----CAAGGA---------C
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10880610 11 +  10971483 CT--------------T----A-----CAAGGA---------C
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147661768 11 + 156195979 CT--------------T----A-----CAAGGA---------C
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            13755 11 +     23629 CT--------------T----A-----CAAGGA---------C
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60611221  9 +  78930452 AA--------------T---GA-----G---GA---------C
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         37819  8 -     40477 ---------------------A-----CAAGGA---------T
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     I 14 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 276546  6 -    399297 GC--------------T----A---------AA----------
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53027171  6 +  72327488 gc--------------t----a---------aa----------
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             18292  8 -     19186 ---------------------A-----TGGGAA---------G
i Crocidura_indochinensis.CroInd_scaffold_38409         I 9 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            49992  5 -     70449 ---------------------------A-AA-A---------A
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 I 6
s Ctenodactylus_gundi.CteGun_scaffold_447                  206331  5 -    956709 TT--------------A----A-----C---------------
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 28686 11 -     67205 AT--------------T----A-----CAAAAA---------C
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                15909 11 +     26546 CT--------------T----A-----CAAAAA---------C
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             57007 11 -    236241 CT--------------T----A-----CAAAAA---------C
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          180272 12 -   6883506 CT--------------T---TA-----CAAcag---------g
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16842951 11 +  31942871 CT--------------T----A-----CAAGGA---------C
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80035446 12 -  96802777 CT--------------T---TA-----CATAGA---------A
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18697409 12 -  18957592 CT--------------C---TA-----CAAGGA---------C
i Desmodus_rotundus.KZ672188.1                          I 10 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 321123 12 +    993696 GT--------------T---TA-----CAGAGA---------C
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   1775 12 +    151128 GT--------------T---TA-----CAGAGA---------C
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   155800 11 +    228994 CA--------------T----A-----AGACAA---------C
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                34268 11 -     73477 CT--------------T----A-----CAAAAA---------C
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22993161 15 -  44670279 CT--------------G---GTCTA--TAGGGG---------C
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 10788 12 +     24177 at--------------tt---c-----caCGAA---------T
i Eidolon_helvum.KE772537.1                             I 9 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1490108 12 +   1727528 cc--------------T---TA-----CACGGA---------A
i Elaphurus_davidianus.JRFZ01086400.1                   I 10 C 0
s Elephantulus_edwardii.JH947210.1                        7804858 12 +  15467074 ct--------------T---TT-----TAGGAA---------C
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        237825  6 -    369425 AC--------------T----A---------AA----------
i Ellobius_lutescens.LOEQ01003611.1                     I 17 C 0
s Ellobius_talpinus.LOJH01090055.1                           4841  6 -      7838 AC--------------T----A---------AA----------
i Ellobius_talpinus.LOJH01090055.1                      I 18 C 0
s Enhydra_lutris.KZ291749.1                              85869770 17 +  99434291 t---------------tttttt--aacaaagca---------a
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4702365 12 +   6522550 CT--------------C---TA-----TAAAGA---------C
i Eptesicus_fuscus.JH977687.1                           I 9 I 1
s Equus_asinus.JREZ01000062.1                             5851546 12 -   7175178 cT--------------T---TA-----CAAAGA---------C
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13350049 12 +  41866177 CT--------------T---TA-----CAAAGA---------C
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          11539 12 +     92910 cT--------------T---TA-----CAAAGA---------C
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11531081 21 +  16010500 ct--------------T---TA-----CAAGGACCATCACTAG
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48768714 11 -  48907691 CT--------------T----A-----CGAGGG---------C
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          313647 12 +    330699 CT--------------T---TA-----CATGGA---------A
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             60099 12 +     89355 CT--------------T---TA-----CATGGA---------A
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              3142 11 +     13586 CT--------------T----A-----TAAGGA---------C
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               3077 11 -      6809 CT--------------T----A-----TAAGGA---------C
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             9552 11 +     36558 CT--------------T----A-----TAAGGA---------C
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             5867 11 +     60246 CT--------------T----A-----TAAGGA---------C
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 9350 11 +    109717 CT--------------T----A-----TAAGGA---------C
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               13729 11 +     16540 CT--------------T----A-----TAAGGA---------C
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                14005 11 +     27497 CT--------------T----A-----TAAGGA---------C
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           16471 11 +     26808 CT--------------T----A-----TAAGGA---------C
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                31195 11 +     46535 CT--------------T----A-----TAAGGA---------C
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              13918 11 -     29447 CT--------------T----A-----TAAGGA---------C
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129890955 11 - 159252932 tt--------------tt---t-----aaaac----------a
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129278027 11 - 158578461 tt--------------tt---t-----aaaac----------a
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 19162 11 +     52776 TT--------------T---TT-----AAAAC----------A
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13890862 11 -  19261668 CT--------------T----A-----CAAAAA---------C
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     209052 11 -    847004 CT--------------T----G-----CAAGGA---------C
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           11433 11 -     43889 CT--------------T----G-----CAAGGA---------C
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           8499 11 +     27357 CT--------------T----G-----CAAGGA---------C
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               154407 11 +    324696 CT--------------T----A-----CAAGGA---------C
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    179908 12 -    189561 CC--------------T---TA-----CATGGA---------A
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 10 C 0
s Glis_glis.GliGli_scaffold_79770                           10819 11 -     18683 AT--------------T----A-----CACAGA---------C
i Glis_glis.GliGli_scaffold_79770                       I 12 C 0
s Gorilla_beringei.k141_111300                               3298 11 -     14630 CT--------------T----A-----CAAGGA---------C
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119650397 11 - 195582420 CT--------------T----A-----CAAGGA---------C
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   75559 11 +    118900 AT--------------T----A-----CACAGA---------C
i Graphiurus_murinus.GraMur_scaffold_4493               I 5 C 0
s Hapalemur_alaotrensis.k141_1198205                         3702 11 +      3980 CT--------------T----A-----TAAGGA---------C
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             26178 11 +     26611 CT--------------T----A-----TAAGGC---------T
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             3638 11 +     56096 CT--------------T----A-----TAAGGC---------T
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        26915 11 -     42470 CT--------------T----A-----TAAGGA---------C
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        43509 11 -     54384 CT--------------T----A-----TAAGGA---------C
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              15198  5 +     53719 ---------------------------A-TA-A---------A
i Helogale_parvula.HelPar_flattened_line_22962          I 9 I 6
s Hemitragus_hylocrius.HemHyl_scaffold_16669                26107 12 -     91191 CC--------------T---TA-----CATGGA---------A
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 10 C 0
s Heterocephalus_glaber.JH602058.1                        2549250 11 +  31725842 CT--------------T----A-----CAAAAA---------T
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               54674 12 +     73687 CT--------------T---TA-----CAAGAA---------C
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              145676 12 +    277961 CT--------------T---TA-----CATGGA---------A
i Hippopotamus_amphibius.HipAmp_scaffold_1308           I 15 C 0
s Hipposideros_armiger.JXIK01001085.1                      276995  8 -    477199 ---------------------A-----CAAGGA---------T
i Hipposideros_armiger.JXIK01001085.1                   I 13 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              6155  8 -      9143 ---------------------A-----TAAGGA---------T
i Hipposideros_galeritus.HipGal_scaffold_104691         I 13 C 0
s Hoolock_leuconedys.ctg79                                      2555 11 -   7690867 CT--------------T----A-----CAAGGA---------C
i Hoolock_leuconedys.ctg79                                 I 48 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 14255  5 -     67322 ---------------------------A-AA-A---------A
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 I 6
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           17170 11 -    119109 CT--------------T----A-----CAAAAA---------C
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              3119 11 +      5897 CT--------------T----A-----CAAGGA---------C
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_1485652                              1539 11 -      1697 CT--------------T----A-----CAAGGA---------C
i Hylobates_agilis.k141_1485652                         C 0 C 0
s Hylobates_klossii.k141_466549                              9563 11 +     11537 CT--------------T----A-----CAAGGA---------C
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14622664 11 -  25970782 CT--------------T----A-----CAAGGA---------C
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1133650                            2554 11 -      2775 CT--------------T----A-----CAAGGA---------C
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             32051 11 -     60944 CT--------------T----A-----CAAGGA---------C
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     4297 11 +     22540 GT--------------T----A-----CAAAAA---------C
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7124184 11 +  13083262 CT--------------T----A-----CAAAGA---------C
i Ictidomys_tridecemlineatus.JH393315.1                 I 14 C 0
s Indri_indri.k141_1884019                                   1382 11 -      2196 CT--------------T----A-----CAAGGG---------C
i Indri_indri.k141_1884019                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               7434 12 +     17520 CT--------------T---TA-----CACGGA---------A
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8563718  7 +  11848649 ---------------------------CTTAGA---------A
i Jaculus_jaculus.JH725517.1                            I 18 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               22259 12 +     37189 CT--------------T---TA-----CATGGA---------A
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          48161 11 -    147782 CT--------------T----A-----CTAGGA---------C
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   112158 12 -    115756 CT--------------C---TA-----TAAAGA---------C
i Lasiurus_borealis.LasBor_scaffold_5102                I 9 I 1
s Lemur_catta.scaffold_1                                258405198 11 - 285822530 CT--------------T----A-----TAAGGA---------C
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        22067 11 +     39228 CT--------------T----A-----TAAGGA---------C
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            51442 11 +     63517 CT--------------T----A-----TAAGGA---------C
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        76685 11 +    116806 CT--------------T----A-----TAAAAA---------A
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     29706 11 -     33031 CT--------------T----A-----TAAGGA---------C
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3083991 16 -   3498232 tt-------------ttt---t--aacaaaaca---------a
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    11173 11 +     22452 CA--------------T----A-----CAAGGA---------C
i Lepus_americanus.LepAme_scaffold_62849                I 12 C 0
s Lipotes_vexillifer.KE558548.1                            134594 12 +   3060487 CT--------------T---TA-----CACGGA---------A
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19245797 11 +  19376315 CT--------------T----A-----CAAGGG---------T
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            8797 11 +     84689 CT--------------T----G-----CAAGGA---------T
i Loris_lydekkerianus.k141_550999                       I 23 C 0
s Loris_tardigradus.ctg97                                 3776548 11 +   6799190 CT--------------T----G-----CAAGGA---------T
i Loris_tardigradus.ctg97                               I 23 C 0
s Loxodonta_africana.GL010040.1                          20589470 12 -  62548349 ct--------------tt---a-----tcaGAA---------C
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11085343 16 +  39895028 tt--------------tt---t-taacaaaata---------a
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             17481 11 +     74745 CT--------------T----A-----CAAGGA---------C
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12703987 11 +  12821369 CT--------------T----A-----CAAGGA---------C
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               6083 11 +      6569 CT--------------T----A-----CAAGGA---------C
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           44385 11 +     63263 CT--------------T----A-----CAAGGA---------C
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_925451                                  393 11 +     10231 CT--------------T----A-----CAAGGA---------C
i Macaca_fuscata.k119_925451                            C 0 C 0
s Macaca_leonina.k141_3421209                                2534 11 +      3017 CT--------------T----A-----CAAGGA---------C
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_mulatta.NC_041755.1                            196033064 11 + 196197964 CT--------------T----A-----CAAGGA---------C
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11443170 11 +  11645122 CT--------------T----A-----CAAGGA---------C
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_radiata.k141_1580474                                2926 11 -      3617 CT--------------T----A-----CAAGGA---------C
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 13256 11 -     55006 CT--------------T----A-----CAAGGA---------C
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43838293 11 +  43892939 CT--------------T----A-----CAAGGA---------C
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                5515 11 -      5978 CT--------------T----A-----CAAGGA---------C
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                700204 12 +    802869 AT--------------T---TC-----CAAGAA---------T
i Macroglossus_sobrinus.MacSob_scaffold_879             I 9 C 0
s Mandrillus_leucophaeus.scaffold125                     43434959 11 -  43563597 CT--------------T----A-----CAAGGA---------C
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4447785 11 -   4543643 CT--------------T----A-----CAAGGA---------C
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            144701 12 +    252755 ct--------------T---TA-----CAAGGA---------C
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             34775 12 +     58827 CT--------------T---TA-----CAAAGA---------C
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36872019 11 +  64221397 CT--------------T----A-----CAAACA---------C
i Marmota_marmota.CZRN01000005.1                        I 14 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       62868  8 -    234502 ---------------------A-----CAAGAA---------T
i Megaderma_lyra.MegLyr_scaffold_3562                   I 13 C 0
s Mellivora_capensis.MelCap_flattened_line_146202             581 16 -      1999 T---------------T-TTTA--AACAAAACA---------A
i Mellivora_capensis.MelCap_flattened_line_146202       C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               10125  6 +     15977 GA--------------T----A---------AA----------
i Meriones_unguiculatus.MerUng_scaffold_52233           I 19 C 0
s Mesocricetus_auratus.KB708139.1                         1044910  6 -  26018355 gc--------------t----a---------aa----------
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Microcebus_murinus.CM007691.1                          16508317 11 +  47401472 CT--------------T----A-----CAAGGA---------c
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  29586 15 -     48017 CT--------------G---TTCTA--CAGAGG---------C
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               21284 12 -     32043 TT--------------C---TA-----CAAGGA---------C
i Micronycteris_hirsuta.MicHir_scaffold_37978           I 9 C 0
s Microtus_ochrogaster.CM001673.1                        22818028  6 -  98408828 aC--------------T----A---------AA----------
i Microtus_ochrogaster.CM001673.1                       I 18 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8208033 12 +  10048721 ct--------------ct---a-----taagGA---------C
i Miniopterus_natalensis.LDJU01000022.1                 I 10 I 1
s Miniopterus_schreibersii.MinSch_scaffold_24116            32705 12 +     45743 CT--------------C---TA-----TAAGGA---------C
i Miniopterus_schreibersii.MinSch_scaffold_24116        I 10 I 1
s Miopithecus_ogouensis.k141_2666161                        33614 11 +     34273 CT--------------T----A-----CAAGGG---------C
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         9297 16 -    104932 TTT-------------T---TT--AACGAAACA---------A
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     3718 11 +      8497 CT--------------T----A-----CAAGGA---------C
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 145029 12 +    154973 CT--------------T---TA-----CATAGA---------A
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                159790 12 +    265003 CT--------------C---TA-----CACAGA---------C
i Mormoops_blainvillei.MorMeg_scaffold_2952             I 9 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 3210 12 -      4346 TC--------------T---TA-----CATGGA---------A
i Moschus_moschiferus.MosMos_scaffold_146101            I 10 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  142889  5 -    168139 ---------------------------A-TA-A---------A
i Mungos_mungo.MunMun_flattened_line_8729               I 9 I 6
s Murina_feae.MurFea_scaffold_2254                          17670 12 -    100666 CT--------------C---TA-----TAAAGA---------C
i Murina_feae.MurFea_scaffold_2254                      I 9 I 1
s Mus_caroli.LT608236.1                                  70764514  6 +  92629107 GC--------------T----A---------AA----------
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75487556  6 +  98207768 GC--------------T----A---------AA----------
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67553751  6 +  89017189 gC--------------T----A---------AA----------
i Mus_pahari.LT608305.1                                 I 17 C 0
s Mus_spretus.CM004110.1                                 74328738  6 +  97876770 GC--------------T----A---------AA----------
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              9300 11 +     98495 AT--------------T----A-----CACGGA---------A
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 9 C 0
s Mustela_putorius.JH417978.1                             4422153 16 -  28371801 t---------------tttt-a--aacaaagca---------a
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     88216 10 -    117718 AT--------------T----A-----CAAAAA----------
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 I 1
s Myotis_brandtii.KE161952.1                               965994 12 +   8389877 CT--------------C---TA-----TAAAAA---------C
i Myotis_brandtii.KE161952.1                            I 9 I 1
s Myotis_davidii.KB114863.1                               5017684 12 +   6462685 CT--------------C---TA-----TAAAAA---------C
i Myotis_davidii.KB114863.1                             I 9 I 1
s Myotis_lucifugus.GL429887.1                             3463581 12 -   3747815 CT--------------C---TA-----TAAAAA---------C
i Myotis_lucifugus.GL429887.1                           I 9 I 1
s Myotis_myotis.MyoMyo_scaffold_6123                         8775 12 +     66751 CT--------------C---TA-----TAAAAA---------C
i Myotis_myotis.MyoMyo_scaffold_6123                    I 9 I 1
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3655 12 -      8794 CT--------------T---TA-----CAAGGT---------C
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            108636  7 +    362372 AC--------------T----A---------AA---------A
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               5993 11 +     48152 CT--------------T----A-----CATGGA---------C
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4482891 16 -  14209539 tt-------------ttt---t--aacaaaaca---------a
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3949642 12 -   4490290 CT--------------T---TA-----CATAGA---------A
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  47897 12 +     94413 CT--------------C---CA-----TAAGGA---------C
i Noctilio_leporinus.NocLep_scaffold_12062              I 9 C 0
s Nomascus_concolor.k141_49591                               1089 11 +      2014 CT--------------T----A-----CAAGGA---------C
i Nomascus_concolor.k141_49591                          C 0 C 0
s Nomascus_gabriellae.k141_906566                            2417 11 -      2544 CT--------------T----A-----CAAGGA---------C
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             22893 11 -  18771707 CT--------------T----A-----CAAGGA---------C
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                   642 11 +      4512 CT--------------T----A-----CAAGGA---------C
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                28336 16 +   3668941 tt--------------tt---t-taacaaaata---------a
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65565436 11 -  95554990 CT--------------T----A-----CAAGGA---------T
i Nycticebus_bengalensis.LG16                           I 288 C 0
s Nycticebus_coucang.k141_2051882                            2164 11 +      6470 CT--------------T----A-----CAAGGA---------T
i Nycticebus_coucang.k141_2051882                       I 262 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65667784 11 +  89412551 ct--------------t----a-----caaggA---------T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     I 266 C 0
s Ochotona_princeps.JH802095.1                            4994138 25 -  23139505 CTTACTAGGACAACCTT----A-----CTAGGA---------C
i Ochotona_princeps.JH802095.1                          I 11 C 0
s Octodon_degus.JH651621.1                                3683708 10 +  10294119 TT--------------T----A-----CAA-AA---------C
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             677539 15 -   3126709 tt--------------tt---t--aacaaaaca---------a
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1078338 12 +   1425656 CC--------------T---TA-----CATGGA---------A
i Odocoileus_virginianus.KZ101650.1                     I 10 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         35633 12 +     78940 CC--------------T---TA-----CATGGA---------A
i Okapia_johnstoni.LVCL01S0017931.1                     I 10 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  123301  6 +    145789 AC--------------T----A---------AA----------
i Ondatra_zibethicus.OndZib_scaffold_6821               I 19 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  35057  6 +     62360 AC--------------T----A---------TA----------
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7223326 12 -   7562323 CT--------------T---TA-----CATAGA---------A
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              41710 12 -     66828 CT--------------T---TT-----TAAGGA---------G
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141873831 11 + 163896628 ca--------------T----A-----CAAGGA---------A
i Oryctolagus_cuniculus.CM000803.1                      I 12 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      305674 16 -    505867 tt--------------tt---t-taactaaata---------a
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       37142 11 +     38679 CT--------------T----G-----CAAGGA---------C
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18006584 11 -  38779656 ct--------------t----g-----CAAGGA---------C
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134075900 12 - 275406953 CC--------------T---TA-----CATGGA---------A
i Ovis_aries.CM001582.2                                 I 10 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      77114 12 +    140051 CC--------------T---TA-----CATGGA---------A
i Ovis_canadensis.OviCan_scaffold_6251                  I 10 C 0
s Pan_paniscus.CM003386.1                               127572642 11 - 205426864 CT--------------T----A-----CAAGGA---------C
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120149795 11 - 196562556 CT--------------T----A-----CAAGGA---------C
i Pan_troglodytes.CM009241.2                            I 50 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  32356 11 +    295523 TT--------------T---TT-----AAAAC----------C
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3636090 11 +  18214204 tt--------------tt---t-----aaaac----------c
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5025737 11 -   6340057 tt--------------tt---t-----aaaac----------a
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1064761 12 -   1292953 CC--------------T---TA-----CATGGA---------A
i Pantholops_hodgsonii.KE114631.1                       I 10 C 0
s Papio_anubis.CM001492.2                               188153741 11 - 188283584 CT--------------T----A-----CAAGGG---------T
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            49953 11 +     76494 CT--------------T----A-----CAAGGG---------T
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47511138 11 +  47705337 CT--------------T----A-----CAAGGG---------T
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 65115 11 -    104429 CT--------------T----A-----CAAGGG---------T
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  14906 11 -     29451 CT--------------T----A-----CAAGGG---------T
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                35309 11 +     35859 CT--------------T----A-----CAAGGG---------T
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113653 10 -    135482 TG--------------T---TT-----A-AA-A---------A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           3190 11 -     23713 CT--------------T----G-----CAAGGA---------T
i Perodicticus_ibeanus.k141_117958                      I 6 C 0
s Perodicticus_potto.k141_713187                            22488 11 -     27972 CT--------------T----G-----CAAGGA---------T
i Perodicticus_potto.k141_713187                        I 6 C 0
s Peromyscus_maniculatus.KI615518.1                       4948237  6 -   8017169 AC--------------T----A---------AA----------
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    10401 11 -     36578 CT--------------T----A-----CAAAAA---------C
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            119943 12 -    122454 CT--------------T---TA-----CATAGA---------A
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           2999 11 -      3310 CT--------------T----A-----CAAGGA---------C
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       22904 11 -     82327 CT--------------T----A-----CAAGGA---------C
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           19651 11 +     19957 CT--------------T----A-----CAAGGA---------C
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26737665 11 +  26888534 CT--------------T----A-----CAAGGA---------C
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            95441 12 +    112873 CT--------------C---TC-----TAAAGA---------C
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        I 13 I 1
s Pithecia_albicans.k141_991845                             41642 11 -     61926 CT--------------T----A-----CAAGGA---------C
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        23071 11 +     78826 CT--------------T----A-----CAAGGA---------C
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              7022 11 -     15800 CT--------------T----A-----CAAGGA---------C
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        10220 11 -     16101 CT--------------T----A-----CAAGGA---------C
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          3529 11 +      9673 CT--------------T----A-----CAAGGA---------C
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13472523 11 -  19735023 CT--------------T----A-----CAAGGA---------C
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           11431 11 -     31692 CT--------------T----A-----CAAGGA---------C
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           4009 12 +     21690 CT--------------T---TA-----CATGGA---------A
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       20867 11 +     44506 CT--------------T----A-----CAAGGA---------T
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        21077 11 +     67491 CT--------------T----A-----CAAGGA---------T
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      11318 11 -     98129 CT--------------T----A-----CAAGGA---------T
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     20923 11 +    147771 CT--------------T----A-----CAAGGA---------T
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        21173 11 -     23762 CT--------------T----A-----CAAGGA---------T
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          1639 11 -     55515 CT--------------T----A-----CAAGGA---------T
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         20992 11 +    152463 CT--------------T----A-----CAAGGA---------T
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      7752 11 +      8943 CT--------------T----A-----CAAGGA---------T
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                         10712 11 +    134592 CT--------------T----A-----CAAGGA---------T
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          21302 11 -     75465 CT--------------T----A-----CAAGGA---------T
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              185190 11 -    373494 CT--------------T----A-----CAAGGA---------C
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19805098 11 +  19899266 CT--------------T----A-----CAAGGA---------C
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               3233 11 -     15069 CT--------------T----A-----CAAGGA---------C
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              3367 11 +     14865 CT--------------T----A-----CAAGGA---------C
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                74541 12 +     78963 CT--------------T---TA-----CAAGAA---------C
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6846574 11 +  12164890 ct--------------t----a-----taagga---------c
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    665191 11 -   2312742 NN--------------N----N-----NNNNNN---------N
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         1716 11 +     11805 CT--------------T----A-----CAAGGG---------C
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           41051 11 +     52369 CT--------------T----A-----CAAGGG---------C
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         33440 11 -     44753 CT--------------T----A-----CAAGGG---------C
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            15361 11 +     27322 CT--------------T----A-----CAAGGG---------C
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       15000 11 -     53241 CT--------------T----A-----CAAGGG---------C
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         37271 11 -     48185 CT--------------T----A-----CAAGGG---------C
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           31665  6 +     77221 GA--------------T----A---------AA----------
i Psammomys_obesus.NESX01026517.1                       I 19 C 0
s Pteronotus_parnellii.KE867983.1                            2459 12 -     27784 CT--------------C---TA-----CAAAGA---------C
i Pteronotus_parnellii.KE867983.1                       I 9 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        244247 16 -    344369 T---------------T-TTTT--AACAAAGCA---------A
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13244589 12 -  17261082 at--------------tt---c-----caAGAA---------T
i Pteropus_alecto.KB031157.1                            I 9 C 0
s Pteropus_vampyrus.KN525959.1                             602539 12 -   3946241 at--------------tt---c-----caAGAA---------T
i Pteropus_vampyrus.KN525959.1                          I 9 C 0
s Puma_concolor.QAVW01000427.1                          131532320 11 - 161321710 tt--------------tt---t-----aaaac----------a
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             27362 11 +     56732 CT--------------T----A-----CAAGGA---------C
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6803853 11 +   6970761 CT--------------T----A-----CAAGGA---------C
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             3246 11 +     18040 CT--------------T----A-----CAAGGA---------C
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                14415 12 +     68503 CC--------------T---TA-----CATGAA---------A
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 9 C 0
s Rattus_norvegicus.chr11                                13913610  6 +  90463843 GC--------------T----A---------AA----------
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1786406  8 +   2252614 ---------------------G-----CAAGGA---------T
i Rhinolophus_sinicus.LVEH01000179.1                    I 13 C 0
s Rhinopithecus_bieti.k119_102124                           13799 11 -     14454 CT--------------T----A-----CAAGGA---------C
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206375125 11 - 206558726 CT--------------T----A-----CAAGGA---------C
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44854025 11 -  45163003 CT--------------T----A-----CAAGGA---------C
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                17879 12 +    109198 AT--------------T---TC-----CAAGAA---------T
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            I 9 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       6217 12 +     12214 CC--------------T---TA-----CATGGA---------A
i Saiga_tatarica.SaiTat_scaffold_82192                  I 10 C 0
s Saimiri_boliviensis.NW_024100938.1                     15670745 11 -  43202129 CT--------------T----A-----CAAGGA---------c
i Saimiri_boliviensis.NW_024100938.1                    I 17 C 0
s Saimiri_cassiquiarensis.k141_808270                        2611 11 +     34089 CT--------------T----A-----CAAGGA---------C
i Saimiri_cassiquiarensis.k141_808270                   I 17 C 0
s Saimiri_macrodon.k141_2087127                              2552 11 -     60842 CT--------------T----A-----CAAGGA---------C
i Saimiri_macrodon.k141_2087127                         I 17 C 0
s Saimiri_oerstedii.k141_841116                              2647 11 +     67014 CT--------------T----A-----CAAGGA---------C
i Saimiri_oerstedii.k141_841116                         I 17 C 0
s Saimiri_sciureus.k141_1947592                              2625 11 +     60816 CT--------------T----A-----CAAGGA---------C
i Saimiri_sciureus.k141_1947592                         I 17 C 0
s Saimiri_ustus.k141_1282476                                 2562 11 -     76454 CT--------------T----A-----CAAGGA---------C
i Saimiri_ustus.k141_1282476                            I 17 C 0
s Sapajus_apella.ctg10                                   17339314 11 -  30362882 CT--------------T----A-----CAAGGA---------C
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         18689 11 -     62485 CT--------------T----A-----CAAGGA---------C
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   29972  9 -    114521 CT--------------T---TA-----G---GA---------G
i Scalopus_aquaticus.ScaAqu_scaffold_9300               I 34 C 0
s Semnopithecus_entellus.k141_1527475                       25787 11 +     26421 CT--------------T----A-----CAAGGA---------C
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       6247 11 +     20762 CT--------------T----A-----CAAGGA---------C
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         39982 11 +     40653 CT--------------T----A-----CAAGGA---------C
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                           10539 11 -     12194 CT--------------T----A-----CAAGGA---------C
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     23961 11 -     27512 CT--------------T----A-----CAAGGA---------C
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         32980 11 -     33692 CT--------------T----A-----CAAGGA---------C
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   97833  6 -    120886 AC--------------T----A---------AA----------
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            16609 12 +    739146 CT--------------T---TT-----CAAGGA---------G
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2238100 11 +   2842873 CT--------------T----A-----CAAAGA---------C
i Spermophilus_dauricus.KZ294190.1                      I 14 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             233004 11 -    276980 T---------------T---TT--AGCAAAG------------
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            25557  5 +     62062 ---------------------------A-AA-A---------A
i Suricata_suricatta.SurSur_flattened_line_20339        I 9 I 6
s Sus_scrofa.CM000824.4                                 189270468 12 + 218635234 CA--------------T---TA-----CATGTA---------A
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        12921 11 -  13920577 CT--------------T----A-----CAAGGA---------C
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               4401 12 -      6213 CT--------------C---TA-----TAAAGA---------C
i Tadarida_brasiliensis.TadBra_scaffold_145589          I 45 I 3
s Tamandua_tetradactyla.TamTet_scaffold_26877               13331 12 +     45698 CT--------------T---TA-----CAAGGT---------C
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      805334  6 +   1148477 CT--------------T---TA-----C---------------
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  55994  6 +     99546 CT--------------T---TA-----C---------------
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               24630 11 +     42269 TT--------------T----A-----TAAGGA---------C
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               57946 11 +     65473 TT--------------T----A-----TAAGGA---------C
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194005277 11 - 194193292 CT--------------T----A-----CAAGGG---------T
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             37462 11 -     47444 CT--------------T----A-----CAAAAA---------C
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  2203 12 +      6782 CT--------------T---TA-----CAAcag---------g
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  134468 12 -    259118 CT--------------C---TA-----CAAGGA---------C
i Tonatia_saurophila.TonSau_scaffold_3334               I 9 C 0
s Trachypithecus_auratus.k141_738098                        24357 11 +     38948 CT--------------T----A-----CAAGGA---------C
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   18084 11 -     32910 CT--------------T----A-----CAAGGA---------C
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       23982 11 +     24652 CT--------------T----A-----CAAGGA---------C
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      2860 11 -      3559 CT--------------T----A-----CAAGGA---------C
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           40804 11 -     54611 CT--------------T----A-----CAAGGA---------C
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       16805 11 +     17312 CT--------------T----A-----CAAGGA---------C
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    24168 11 -     25040 CT--------------T----A-----CAAGGA---------C
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          2829 11 +      3528 CT--------------T----A-----CAAGGA---------C
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  49196 11 +     51589 CT--------------T----A-----CAAGGA---------C
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       12372 11 +     14732 CT--------------T----A-----CAAGGA---------C
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       2849 11 -     28054 CT--------------T----A-----CAAGGA---------C
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44657644 11 -  44834318 CT--------------T----A-----CAAGGA---------C
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        2653 11 +      3372 CT--------------T----A-----CAAGGA---------C
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   3816 12 +     90398 TT--------------T---TA-----CATGGG---------A
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16079920 12 +  31416278 ct--------------tt---a-----taaGAA---------C
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2790564  8 -   3938065 tt--------------t----a-----t---ga---------a
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    3088  8 +     13056 TT--------------T----A-----T---GA---------A
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69312043 12 -  96451834 CT--------------T---TA-----CATAGA---------A
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 25169 12 -     25548 CT--------------T---TA-----GGAGGA---------C
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6512807 12 +  28682327 tt--------------tt---t--aacaaa------------a
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  3415 11 -     20643 CC--------------T----A-----TAAGGA---------C
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             22959 11 -     33872 CC--------------T----A-----TAAGGA---------C
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1523277 12 -   2331223 CT--------------T---TA-----CATGGA---------A
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                135743 16 -    281493 TT--------------T---TT-TAACAAAATA---------A
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       125197  5 -    134049 CT--------------T----A-----C---------------
i Xerus_inauris.XerIna_scaffold_7898                    I 14 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        212274 15 -    227762 TT--------------T---TT--AACAAAACA---------A
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     13434  7 -     20485 ---------------------------CTTAGA---------A
i Zapus_hudsonius.ZapHud_scaffold_64392                 I 1 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           5540 12 -      8775 CT--------------T---TA-----CATGGA---------A
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Sorex_araneus.JH798170.1                               17748817 583 -  27805282 I
e Perognathus_longimembris.PerPac_flattened_line_22291      41081  0 -     45160 C
e Dipodomys_stephensi.DipSte_scaffold_44365                 25100  0 +     28912 C
e Dipodomys_ordii.KN672545.1                              3653536  0 +   4240102 C
e Chrysochloris_asiatica.ChrAsi_scaffold_141308              7099  0 -     12508 C
e Mesoplodon_bidens.MesBid_scaffold_183284                   2166 255 +      2166 T
e Macaca_tonkeana.k141_2870633                               2864 158 -     27140 T
e Macaca_nigra.k141_282495                                   2859 158 -     46448 T
e Macaca_maura.k141_251854                                  43912 158 -     79256 T
e Nomascus_annamensis.k141_1439838                            857  0 +      3718 C

a score=0.000000
s hg38.chr4_GL000008v2_random                                9911 4 +    209709 AG-----TT
s Acinonyx_jubatus.LLWD01000356.1                         2031990 2 +   3721120 ca-------
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    110659 4 -    189883 AC-----CT
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10655334 2 +  23371972 CG-------
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7092259 2 -  16596857 ca-------
i Ailurus_fulgens.LNAC01000003.1                        I 206 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   10986 4 -     22067 AA-----CC
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_3103707                  60928 4 +     61638 AC-----TT
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        52736 4 +     53391 AC-----TT
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         3461 4 +     72529 AC-----TT
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          3036 4 +      3797 AC-----TT
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             8209 4 -     18050 AG-----TT
i Alouatta_belzebul.k141_1818029                        C 0 I 1
s Alouatta_caraya.k141_5460                                  9322 4 -     11521 AG-----TT
i Alouatta_caraya.k141_5460                             C 0 I 1
s Alouatta_discolor.k141_811576                              8886 4 -     21359 AG-----TT
i Alouatta_discolor.k141_811576                         C 0 I 1
s Alouatta_juara.k141_298055                                  177 4 +      1823 AG-----TT
i Alouatta_juara.k141_298055                            C 0 I 1
s Alouatta_macconnelli.k141_1331706                          8177 4 -     10438 AG-----TT
i Alouatta_macconnelli.k141_1331706                     C 0 I 1
s Alouatta_nigerrima.k141_2718643                            4833 4 +      7047 AG-----TT
i Alouatta_nigerrima.k141_2718643                       C 0 I 1
s Alouatta_palliata.k141_1316127                             8119 4 +     10410 AG-----TT
i Alouatta_palliata.k141_1316127                        C 0 I 1
s Alouatta_puruensis.k141_1284840                            1922 4 -      4927 AG-----TT
i Alouatta_puruensis.k141_1284840                       C 0 I 1
s Alouatta_seniculus.k141_990213                             4852 4 +      6429 AG-----TT
i Alouatta_seniculus.k141_990213                        C 0 I 1
s Ammotragus_lervia.NIVO01013474.1                        3518771 4 +   4113121 GG-----CA
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      388920 4 -    631301 AA-----CT
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            29357 4 +     33004 GA-----CA
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 60570 4 +     78111 AG-----TT
i Aotus_azarae.k141_3170768                             C 0 I 1
s Aotus_griseimembra.k141_3275623                            3511 4 +     22701 AG-----TT
i Aotus_griseimembra.k141_3275623                       C 0 I 1
s Aotus_nancymaae.KZ196176.1                              5747468 4 +   9889416 ag-----tt
i Aotus_nancymaae.KZ196176.1                            C 0 I 1
s Aotus_trivirgatus.k141_1740727                             4053 4 -    104377 AG-----TT
i Aotus_trivirgatus.k141_1740727                        C 0 I 1
s Aotus_vociferans.k141_718647                               4059 4 +     23246 AG-----TT
i Aotus_vociferans.k141_718647                          C 0 I 1
s Aplodontia_rufa.AprRuf_scaffold_156013                     2063 4 +      5067 AA-----CT
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      16000 4 +     17483 AA-----TT
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 7316 4 -     29036 AA-----CT
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9537303 4 +  39197703 AG-----TT
i Ateles_geoffroyi_b.tarseq_2582                           C 0 I 1
s Ateles_belzebuth.k141_1348307                             58587 4 +     85812 AG-----TT
i Ateles_belzebuth.k141_1348307                         C 0 I 1
s Ateles_chamek.k141_1072810                                 9586 4 +     89302 AG-----TT
i Ateles_chamek.k141_1072810                            C 0 I 1
s Ateles_geoffroyi_a.k141_1300742                             14091 4 -     58268 AG-----TT
i Ateles_geoffroyi_a.k141_1300742                         C 0 I 1
s Ateles_marginatus.k141_899112                             62082 4 +    119057 AG-----TT
i Ateles_marginatus.k141_899112                         C 0 I 1
s Ateles_paniscus.k141_1631200                               4051 4 -     25888 AG-----TT
i Ateles_paniscus.k141_1631200                          C 0 I 1
s Avahi_laniger.k141_2840928                                 4801 4 -     16375 AG-----CT
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              1121 4 +      2719 AG-----CT
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26378772 4 +  51448160 Ga-----ca
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        4004 4 -     13118 Ga-----ca
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   41838 4 -     72089 GG-----CA
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6557864 4 +   6870073 AA-----CA
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138138103 4 - 161108492 AA-----CA
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     570477 4 -    998990 AA-----Ca
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136293836 4 - 158972876 AA-----CA
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1229592 4 -   1914593 AA-----CA
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               111944 4 -    171031 AG-----TT
i Cacajao_ayresi.k141_724503                            C 0 I 1
s Cacajao_calvus.k141_96166                                 10970 4 +    125063 AG-----TT
i Cacajao_calvus.k141_96166                             C 0 I 1
s Cacajao_hosomi.k141_303789                                13018 4 -    216513 AG-----TT
i Cacajao_hosomi.k141_303789                            C 0 I 1
s Cacajao_melanocephalus.k141_1160263                        5558 4 -    134917 AG-----TT
i Cacajao_melanocephalus.k141_1160263                   C 0 I 1
s Camelus_bactrianus.KN276303.1                           3218180 4 -   8989139 GA-----TA
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           395885 4 -  15254737 GA-----TA
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2971618 4 +   6889770 GA-----TA
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11516713 2 +  39901454 CA-------
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   11731 2 +     87036 CA-------
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11263374 2 -  35597290 ca-------
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11085903 2 +  39895921 ca-------
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16452927 2 -  44759192 ca-------
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21323847 4 + 157394656 GG-----CA
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135705074 4 - 157403528 GG-----CA
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_979108                   159 4 -      1248 AA-----TT
i Capromys_pilorides.CapPil_scaffold_979108             C 0 C 0
s Carlito_syrichta.NW_007248099.1                          307158 4 +    345090 AA-----CT
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               58112 3 +     67245 A------CT
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   28602 4 +     33760 AA-----AT
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   157393 4 -    276539 GA-----CA
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15784762 4 -  24422027 AA-----ct
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15796694 4 -  24440124 AA-----ct
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       174885 4 +    436027 AA-----CT
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18888797 4 -  29618158 AG-----TT
i Cebus_albifrons.Contig22                              C 0 I 1
s Cebus_olivaceus.k141_93739                                 6341 4 -     26817 AG-----TT
i Cebus_olivaceus.k141_93739                            C 0 I 1
s Cebus_unicolor.k141_239009                                10581 4 +     25043 AG-----TT
i Cebus_unicolor.k141_239009                            C 0 I 1
s Cephalopachus_bancanus.k141_702587                         6191 4 +     21754 AA-----CT
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4362488 4 +   7569818 aa-----at
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         2240 4 -      9338 AA-----AT
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6552720 4 +   6739814 AC-----TT
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      54197 4 -     54931 AC-----TT
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         19181 4 -     19697 AC-----TT
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         56712 4 -    107033 AC-----TT
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        3152 4 -      3853 AC-----TT
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          27088 4 +     30494 AC-----TT
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           3112 4 -      4022 AC-----TT
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          3006 4 -      3505 AC-----TT
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           21794 4 +     35983 AC-----TT
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11988331 4 +  12117833 AC-----TT
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46475084 4 +  46592721 AC-----TT
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      32913 4 +     33420 AC-----TT
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        2947 4 -      3443 AC-----TT
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      3940 4 -      4669 AC-----TT
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        3733 4 -      4411 AC-----TT
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         3263 4 -      4205 AC-----TT
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_1070855          1482 4 -      1715 gg-----tt
i Chaetophractus_vellerosus.ChaVel_scaffold_1070855     C 0 T 413
s Cheirogaleus_major.k141_1157592                           57107 4 -     68416 AG-----CT
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            6149 4 +     13308 AG-----CT
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             3606 4 -     18223 AG-----TT
i Cheracebus_lucifer.k141_619653                        C 0 I 1
s Cheracebus_lugens.k141_203936                             20629 4 +     25473 AG-----TT
i Cheracebus_lugens.k141_203936                         C 0 I 1
s Cheracebus_regulus.k141_2128895                           39668 4 +     57117 AG-----TT
i Cheracebus_regulus.k141_2128895                       C 0 I 1
s Cheracebus_torquatus.k141_315545                          44343 4 +     54541 AG-----TT
i Cheracebus_torquatus.k141_315545                      C 0 I 1
s Chinchilla_lanigera.JH721867.1                         15959928 4 +  43084221 aa-----ct
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         69166 4 +    196370 AG-----TT
i Chiropotes_israelita.k141_1189915                     C 0 I 1
s Chiropotes_sagulatus.k141_773804                          13346 4 +     40510 AG-----TT
i Chiropotes_sagulatus.k141_773804                      C 0 I 1
s Chlorocebus_aethiops.ctg22                             15136547 4 -  15256731 AC-----TT
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      31593 4 -     53260 AC-----TT
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101142042 4 + 101219884 AC-----TT
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                15069 4 -     21363 AA-----TT
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           760380 4 +    964067 AA-----TT
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10880621 4 +  10971483 AC-----TT
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147661779 4 + 156195979 AC-----TT
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            13766 4 +     23629 AC-----TT
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60611230 4 +  78930452 GA-----cc
i Condylura_cristata.JH655880.1                         C 0 I 6
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         37827 4 -     40477 GA-----CA
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 276552 4 -    399297 AT-----TT
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53027177 4 +  72327488 at-----at
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             18300 9 -     19186 TACCTAGAT
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 I 1
s Cryptoprocta_ferox.CryFer_flattened_line_19014            50003 2 -     70449 CA-------
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 6 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 28697 4 -     67205 AA-----CT
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                15920 4 +     26546 AA-----CT
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 I 1
s Dasyprocta_punctata.DasPun_flattened_line_634             57018 4 -    236241 AA-----CT
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          180284 4 -   6883506 ca-----tt
i Dasypus_novemcinctus.JH568778.1                       C 0 I 541
s Daubentonia_madagascariensis.ctg11                     16842962 4 +  31942871 AA-----CT
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80035458 4 -  96802777 Ga-----ca
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18697421 4 -  18957592 AA-----ct
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 321135 4 +    993696 aa-----at
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   1787 4 +    151128 AA-----AT
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   155811 4 +    228994 AA-----CT
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                34279 4 -     73477 AA-----CT
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22993176 4 -  44670279 AA-----TT
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 10800 4 +     24177 Ga-----ct
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1490120 4 +   1727528 GA-----CA
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7804870 4 +  15467074 AA-----TT
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        237831 4 -    369425 AT-----CT
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           4847 4 -      7838 AT-----CT
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85869787 2 +  99434291 cA-------
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4702378 3 +   6522550 -a-----ct
i Eptesicus_fuscus.JH977687.1                           I 1 C 0
s Equus_asinus.JREZ01000062.1                             5851558 4 -   7175178 Aa-----ct
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13350061 4 +  41866177 Aa-----ct
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          11551 4 +     92910 Aa-----ct
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11531102 4 +  16010500 AA-----TT
i Erinaceus_europaeus.JH835290.1                        C 0 I 1
s Erythrocebus_patas.Contig8                             48768725 4 -  48907691 AC-----TT
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          313659 4 +    330699 GA-----CA
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             60111 4 +     89355 GA-----CA
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              3153 4 +     13586 AG-----CT
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               3088 4 -      6809 AG-----CT
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             9563 4 +     36558 AG-----CT
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             5878 4 +     60246 AG-----CT
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 9361 4 +    109717 AG-----CT
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               13740 4 +     16540 AG-----CT
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                14016 4 +     27497 AG-----CT
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           16482 4 +     26808 AG-----CT
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                31206 4 +     46535 AG-----CT
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              13929 4 -     29447 AG-----CT
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129890966 2 - 159252932 ca-------
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129278038 2 - 158578461 ca-------
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 19173 2 +     52776 CA-------
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13890873 4 -  19261668 AA-----CT
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     209063 4 -    847004 AA-----CT
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           11444 4 -     43889 AA-----CT
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           8510 4 +     27357 AA-----CT
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               154418 4 +    324696 AA-----GT
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    179920 4 -    189561 GA-----Ca
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           10830 4 -     18683 AA-----CT
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               3309 4 -     14630 AG-----TT
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119650408 4 - 195582420 AG-----TT
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   75570 4 +    118900 AA-----CT
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                         3713 4 +      3980 AG-----CT
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             26189 4 +     26611 AG-----CT
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             3649 4 +     56096 AG-----CT
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        26926 4 -     42470 AG-----CT
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        43520 4 -     54384 AG-----CT
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              15209 2 +     53719 CA-------
i Helogale_parvula.HelPar_flattened_line_22962          I 6 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                26119 4 -     91191 GG-----CA
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2549261 4 +  31725842 aa-----ct
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               54686 4 +     73687 AG-----AT
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              145688 4 +    277961 GA-----TA
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      277003 4 -    477199 AA-----CA
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              6163 4 -      9143 AA-----CA
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      2566 4 -   7690867 AG-----TT
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 14266 2 -     67322 AG-------
i Hyaena_hyaena.HyaHya_flattened_line_20729             I 6 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           17181 4 -    119109 AA-----TT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              3130 4 +      5897 AG-----TT
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_1485652                              1550 4 -      1697 AG-----TT
i Hylobates_agilis.k141_1485652                         C 0 C 0
s Hylobates_klossii.k141_466549                              9574 4 +     11537 AG-----TT
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14622675 4 -  25970782 AG-----TT
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1133650                            2565 4 -      2775 AG-----TT
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             32062 4 -     60944 AG-----TT
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     4308 4 +     22540 AA-----CT
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7124195 4 +  13083262 Aa-----ct
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_1884019                                   1393 4 -      2196 AG-----CT
i Indri_indri.k141_1884019                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               7446 4 +     17520 GA-----CA
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8563725 4 +  11848649 AA-----CT
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               22271 4 +     37189 GA-----CA
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          48172 4 -    147782 AG-----TT
i Lagothrix_lagothricha.k141_12968                      C 0 I 1
s Lasiurus_borealis.LasBor_scaffold_5102                   112171 3 -    115756 -A-----CT
i Lasiurus_borealis.LasBor_scaffold_5102                I 1 C 0
s Lemur_catta.scaffold_1                                258405209 4 - 285822530 AG-----CT
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        22078 4 +     39228 GG-----CT
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            51453 4 +     63517 GG-----CT
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        76696 4 +    116806 AA-----TC
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     29717 4 -     33031 GG-----CT
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3084007 2 -   3498232 ca-------
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    11184 4 +     22452 AA-----CT
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            134606 4 +   3060487 Ga-----ca
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19245808 4 +  19376315 AC-----TT
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            8808 4 +     84689 AA-----CT
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3776559 4 +   6799190 AA-----CT
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20589482 4 -  62548349 AA-----TT
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11085359 2 +  39895028 ca-------
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             17492 4 +     74745 AC-----TT
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12703998 4 +  12821369 AC-----TT
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               6094 4 +      6569 AC-----TT
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           44396 4 +     63263 AC-----TT
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_925451                                  404 4 +     10231 AC-----TT
i Macaca_fuscata.k119_925451                            C 0 C 0
s Macaca_leonina.k141_3421209                                2545 4 +      3017 AC-----TT
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_mulatta.NC_041755.1                            196033075 4 + 196197964 AC-----TT
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11443181 4 +  11645122 AC-----TT
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_radiata.k141_1580474                                2937 4 -      3617 AC-----TT
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 13267 4 -     55006 AC-----TT
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43838304 4 +  43892939 AC-----TT
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                5526 4 -      5978 AC-----TT
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                700216 4 +    802869 GA-----CT
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43434970 4 -  43563597 AC-----TT
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4447796 4 -   4543643 AC-----TT
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            144713 3 +    252755 A------AT
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             34787 4 +     58827 AA-----AT
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36872030 4 +  64221397 Aa-----ct
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       62876 4 -    234502 GA-----CA
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_146202             597 2 -      1999 CA-------
i Mellivora_capensis.MelCap_flattened_line_146202       C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               10131 4 +     15977 AT-----CT
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1044916 4 -  26018355 at-----at
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Microcebus_murinus.CM007691.1                          16508328 4 +  47401472 aa-----ct
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  29601 4 -     48017 AA-----TT
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               21296 4 -     32043 AA-----CT
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22818034 4 -  98408828 AG-----CT
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8208046 2 +  10048721 -G-----C-
i Miniopterus_natalensis.LDJU01000022.1                 I 1 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            32718 2 +     45743 -G-----C-
i Miniopterus_schreibersii.MinSch_scaffold_24116        I 1 C 0
s Miopithecus_ogouensis.k141_2666161                        33625 4 +     34273 AC-----TT
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         9313 2 -    104932 TA-------
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     3729 4 +      8497 AA-----CT
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 145041 4 +    154973 GA-----CA
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                159802 4 +    265003 AA-----CT
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 3222 4 -      4346 GA-----CA
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  142900 2 -    168139 CA-------
i Mungos_mungo.MunMun_flattened_line_8729               I 6 C 0
s Murina_feae.MurFea_scaffold_2254                          17683 3 -    100666 -A-----CT
i Murina_feae.MurFea_scaffold_2254                      I 1 C 0
s Mus_caroli.LT608236.1                                  70764520 4 +  92629107 AC-----CT
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75487562 4 +  98207768 AG-----CT
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67553757 4 +  89017189 AC-----CT
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74328744 4 +  97876770 AC-----CT
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              9311 4 +     98495 AA-----TT
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4422169 2 -  28371801 cA-------
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     88227 4 -    117718 AA-----TT
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 1 C 0
s Myotis_brandtii.KE161952.1                               966007 3 +   8389877 -a-----ct
i Myotis_brandtii.KE161952.1                            I 1 C 0
s Myotis_davidii.KB114863.1                               5017697 3 +   6462685 -A-----ct
i Myotis_davidii.KB114863.1                             I 1 C 0
s Myotis_lucifugus.GL429887.1                             3463594 3 -   3747815 -a-----ct
i Myotis_lucifugus.GL429887.1                           I 1 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         8788 3 +     66751 -A-----CT
i Myotis_myotis.MyoMyo_scaffold_6123                    I 1 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3667 4 -      8794 AA-----AT
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            108643 4 +    362372 AG-----CA
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               6004 4 +     48152 AC-----TT
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4482907 2 -  14209539 ca-------
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3949654 4 -   4490290 GA-----CA
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  47909 4 +     94413 AA-----CT
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_concolor.k141_49591                               1100 4 +      2014 AG-----TT
i Nomascus_concolor.k141_49591                          C 0 C 0
s Nomascus_gabriellae.k141_906566                            2428 4 -      2544 AG-----TT
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             22904 4 -  18771707 AG-----TT
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                   653 4 +      4512 AG-----TT
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                28352 2 +   3668941 ca-------
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65565447 4 -  95554990 AA-----CT
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            2175 4 +      6470 AA-----CT
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65667795 4 +  89412551 AA-----CT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4994163 4 -  23139505 AA-----CC
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3683718 4 +  10294119 AA-----CT
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             677554 2 -   3126709 ca-------
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1078350 4 +   1425656 AA-----CA
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         35645 4 +     78940 GA-----Ca
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  123307 4 +    145789 AT-----CT
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  35063 4 +     62360 AT-----CT
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7223338 4 -   7562323 Ga-----ct
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              41722 4 -     66828 AA-----TT
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141873842 4 + 163896628 aa-----ct
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      305690 2 -    505867 ca-------
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       37153 4 +     38679 AA-----CT
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18006595 4 -  38779656 AA-----CT
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134075912 4 - 275406953 GG-----CA
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      77126 4 +    140051 GG-----CA
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127572653 4 - 205426864 AG-----TT
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120149806 4 - 196562556 AG-----TT
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  32367 2 +    295523 CA-------
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3636101 2 +  18214204 ca-------
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5025748 2 -   6340057 ca-------
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1064773 4 -   1292953 GG-----Ca
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188153752 4 - 188283584 AC-----TT
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            49964 4 +     76494 AC-----TT
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47511149 4 +  47705337 AC-----TT
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 65126 4 -    104429 AC-----TT
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  14917 4 -     29451 AC-----TT
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                35320 4 +     35859 AC-----TT
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113663 2 -    135482 AA-------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           3201 4 -     23713 AA-----GT
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            22499 4 -     27972 AA-----GT
i Perodicticus_potto.k141_713187                        C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4948243 4 -   8017169 AT-----CT
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    10412 4 -     36578 AA-----CT
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            119955 4 -    122454 GA-----CA
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           3010 4 -      3310 AC-----TT
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       22915 4 -     82327 AC-----TT
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           19662 4 +     19957 AC-----TT
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26737676 4 +  26888534 AC-----TT
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            95454 3 +    112873 -A-----TT
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        I 1 C 0
s Pithecia_albicans.k141_991845                             41653 4 -     61926 AG-----TT
i Pithecia_albicans.k141_991845                         C 0 I 1
s Pithecia_chrysocephala.k141_159118                        23082 4 +     78826 AG-----TT
i Pithecia_chrysocephala.k141_159118                    C 0 I 1
s Pithecia_hirsuta.k141_1152968                              7033 4 -     15800 AG-----TT
i Pithecia_hirsuta.k141_1152968                         C 0 I 1
s Pithecia_mittermeieri.k141_2119203                        10231 4 -     16101 AG-----TT
i Pithecia_mittermeieri.k141_2119203                    C 0 I 1
s Pithecia_pissinattii.k141_1102319                          3540 4 +      9673 AG-----TT
i Pithecia_pissinattii.k141_1102319                     C 0 I 1
s Pithecia_pithecia.tarseq_313                           13472534 4 -  19735023 AG-----TT
i Pithecia_pithecia.tarseq_313                          C 0 I 1
s Pithecia_vanzolinii.k141_831006                           11442 4 -     31692 AG-----TT
i Pithecia_vanzolinii.k141_831006                       C 0 I 1
s Platanista_gangetica.PlaMin_flattened_line_72990           4021 4 +     21690 AA-----CA
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       20878 4 +     44506 AG-----TT
i Plecturocebus_bernhardi.k141_959214                   C 0 I 1
s Plecturocebus_brunneus.k141_498086                        21088 4 +     67491 AG-----TT
i Plecturocebus_brunneus.k141_498086                    C 0 I 1
s Plecturocebus_caligatus.k141_2539816                      11329 4 -     98129 AG-----TT
i Plecturocebus_caligatus.k141_2539816                  C 0 I 1
s Plecturocebus_cinerascens.k141_744510                     20934 4 +    147771 AG-----TT
i Plecturocebus_cinerascens.k141_744510                 C 0 I 1
s Plecturocebus_cupreus.k141_1223294                        21184 4 -     23762 AG-----TT
i Plecturocebus_cupreus.k141_1223294                    C 0 I 1
s Plecturocebus_dubius.k141_3565563                          1650 4 -     55515 AG-----TT
i Plecturocebus_dubius.k141_3565563                     C 0 I 1
s Plecturocebus_grovesi.k141_242819                         21003 4 +    152463 AG-----TT
i Plecturocebus_grovesi.k141_242819                     C 0 I 1
s Plecturocebus_hoffmannsi.k141_1595076                      7763 4 +      8943 AG-----TT
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 I 1
s Plecturocebus_miltoni.k141_841561                         10723 4 +    134592 AG-----TT
i Plecturocebus_miltoni.k141_841561                     C 0 I 1
s Plecturocebus_moloch.k141_890597                          21313 4 -     75465 AG-----TT
i Plecturocebus_moloch.k141_890597                      C 0 I 1
s Pongo_abelii.NDHI03003816.1                              185201 4 -    373494 AG-----TT
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19805109 4 +  19899266 AG-----TT
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               3244 4 -     15069 AC-----TT
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              3378 4 +     14865 AC-----TT
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                74553 4 +     78963 AG-----AT
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6846585 4 +  12164890 ag-----ct
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    665202 4 -   2312742 NN-----NN
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         1727 4 +     11805 AG-----CT
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           41062 4 +     52369 AG-----CT
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         33451 4 -     44753 AG-----CT
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            15372 4 +     27322 AG-----CT
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       15011 4 -     53241 AG-----CT
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         37282 4 -     48185 AG-----CT
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           31671 4 +     77221 AT-----ct
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            2471 4 -     27784 AA-----CT
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        244263 2 -    344369 CA-------
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13244601 4 -  17261082 Ga-----ct
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             602551 4 -   3946241 Ga-----ct
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131532331 2 - 161321710 cg-------
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             27373 4 +     56732 AC-----TT
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6803864 4 +   6970761 AC-----TT
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             3257 4 +     18040 AC-----TT
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                14427 4 +     68503 AA-----CA
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13913616 4 +  90463843 AT-----CT
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1786414 4 +   2252614 AA-----CA
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           13810 4 -     14454 AC-----TT
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206375136 4 - 206558726 AT-----TT
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44854036 4 -  45163003 AC-----TT
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                17891 4 +    109198 GA-----CT
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       6229 4 +     12214 AG-----CA
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15670756 4 -  43202129 ag-----tt
i Saimiri_boliviensis.NW_024100938.1                    C 0 I 1
s Saimiri_cassiquiarensis.k141_808270                        2622 4 +     34089 AG-----TT
i Saimiri_cassiquiarensis.k141_808270                   C 0 I 1
s Saimiri_macrodon.k141_2087127                              2563 4 -     60842 AG-----TT
i Saimiri_macrodon.k141_2087127                         C 0 I 1
s Saimiri_oerstedii.k141_841116                              2658 4 +     67014 AG-----TT
i Saimiri_oerstedii.k141_841116                         C 0 I 1
s Saimiri_sciureus.k141_1947592                              2636 4 +     60816 AG-----TT
i Saimiri_sciureus.k141_1947592                         C 0 I 1
s Saimiri_ustus.k141_1282476                                 2573 4 -     76454 AG-----TT
i Saimiri_ustus.k141_1282476                            C 0 I 1
s Sapajus_apella.ctg10                                   17339325 4 -  30362882 AG-----TT
i Sapajus_apella.ctg10                                  C 0 I 1
s Sapajus_macrocephalus.k141_966464                         18700 4 -     62485 AG-----TT
i Sapajus_macrocephalus.k141_966464                     C 0 I 1
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   29981 4 -    114521 AA-----AC
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 I 6
s Semnopithecus_entellus.k141_1527475                       25798 4 +     26421 AC-----TT
i Semnopithecus_entellus.k141_1527475                   C 0 I 1
s Semnopithecus_hypoleucos.k141_761524                       6258 4 +     20762 AC-----TT
i Semnopithecus_hypoleucos.k141_761524                  C 0 I 1
s Semnopithecus_johnii.k141_1351450                         39993 4 +     40653 AC-----TT
i Semnopithecus_johnii.k141_1351450                     C 0 I 1
s Semnopithecus_priam.k141_198153                           10550 4 -     12194 AC-----TT
i Semnopithecus_priam.k141_198153                       C 0 I 1
s Semnopithecus_schistaceus.k141_653647                     23972 4 -     27512 AC-----TT
i Semnopithecus_schistaceus.k141_653647                 C 0 I 1
s Semnopithecus_vetulus.k141_642050                         32991 4 -     33692 AC-----TT
i Semnopithecus_vetulus.k141_642050                     C 0 I 1
s Sigmodon_hispidus.SigHis_scaffold_11332                   97839 4 -    120886 AT-----CT
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            16621 4 +    739146 AA-----AC
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 I 1
s Spermophilus_dauricus.KZ294190.1                        2238111 4 +   2842873 Aa-----ct
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             233015 2 -    276980 CA-------
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            25568 2 +     62062 CA-------
i Suricata_suricatta.SurSur_flattened_line_20339        I 6 C 0
s Sus_scrofa.CM000824.4                                 189270480 4 + 218635234 GA-----CA
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        12932 4 -  13920577 AG-----TT
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               4416 4 -      6213 AA-----CC
i Tadarida_brasiliensis.TadBra_scaffold_145589          I 3 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               13343 4 +     45698 AA-----AT
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      805340 4 +   1148477 AA-----CT
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  56000 4 +     99546 AA-----CT
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               24641 4 +     42269 AA-----CT
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               57957 4 +     65473 AA-----CT
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194005288 4 - 194193292 AC-----TT
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             37473 4 -     47444 AA-----CT
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  2215 4 +      6782 gg-----tt
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 I 565
s Tonatia_saurophila.TonSau_scaffold_3334                  134480 4 -    259118 AA-----CT
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        24368 4 +     38948 AC-----TT
i Trachypithecus_auratus.k141_738098                    C 0 I 1
s Trachypithecus_crepusculus.k141_1588528                   18095 4 -     32910 AC-----TT
i Trachypithecus_crepusculus.k141_1588528               C 0 I 1
s Trachypithecus_cristatus.k141_27198                       23993 4 +     24652 AC-----TT
i Trachypithecus_cristatus.k141_27198                   C 0 I 1
s Trachypithecus_francoisi.k141_1178450                      2871 4 -      3559 AC-----TT
i Trachypithecus_francoisi.k141_1178450                 C 0 I 1
s Trachypithecus_geei.k141_670367                           40815 4 -     54611 AC-----TT
i Trachypithecus_geei.k141_670367                       C 0 I 1
s Trachypithecus_germaini.k141_809503                       16816 4 +     17312 AC-----TT
i Trachypithecus_germaini.k141_809503                   C 0 I 1
s Trachypithecus_hatinhensis.k141_357672                    24179 4 -     25040 AC-----TT
i Trachypithecus_hatinhensis.k141_357672                C 0 I 1
s Trachypithecus_laotum.k141_171445                          2840 4 +      3528 AC-----TT
i Trachypithecus_laotum.k141_171445                     C 0 I 1
s Trachypithecus_leucocephalus.k141_283605                  49207 4 +     51589 AC-----TT
i Trachypithecus_leucocephalus.k141_283605              C 0 I 1
s Trachypithecus_melamera.k141_238507                       12383 4 +     14732 AC-----TT
i Trachypithecus_melamera.k141_238507                   C 0 I 1
s Trachypithecus_obscurus.k141_1115109                       2860 4 -     28054 AC-----TT
i Trachypithecus_obscurus.k141_1115109                  C 0 I 1
s Trachypithecus_phayrei.ctg3                            44657655 4 -  44834318 AC-----TT
i Trachypithecus_phayrei.ctg3                           C 0 I 1
s Trachypithecus_pileatus.k141_469329                        2664 4 +      3372 AC-----TT
i Trachypithecus_pileatus.k141_469329                   C 0 I 1
s Tragulus_javanicus.TraJav_scaffold_14717                   3828 4 +     90398 GA-----GA
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16079932 4 +  31416278 AA-----TT
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2790572 4 -   3938065 AA-----CT
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    3096 4 +     13056 AA-----CT
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69312055 4 -  96451834 Ga-----ca
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 25181 4 -     25548 AA-----CC
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 I 6
s Ursus_maritimus.KK498671.1                              6512819 2 +  28682327 ca-------
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  3426 4 -     20643 AG-----CT
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             22970 4 -     33872 AG-----CT
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1523289 4 -   2331223 GA-----TA
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                135759 2 -    281493 CA-------
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       125202 4 -    134049 AA-----TT
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        212289 2 -    227762 CA-------
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     13441 4 -     20485 CA-----GT
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           5552 4 -      8775 GA-----CA
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Sorex_araneus.JH798170.1                               17748817 583 -  27805282 I
e Perognathus_longimembris.PerPac_flattened_line_22291      41081 0 -     45160 C
e Dipodomys_stephensi.DipSte_scaffold_44365                 25100 0 +     28912 C
e Dipodomys_ordii.KN672545.1                              3653536 0 +   4240102 C
e Chrysochloris_asiatica.ChrAsi_scaffold_141308              7099 0 -     12508 C
e Mesoplodon_bidens.MesBid_scaffold_183284                   2166 255 +      2166 T
e Macaca_tonkeana.k141_2870633                               2864 158 -     27140 T
e Macaca_nigra.k141_282495                                   2859 158 -     46448 T
e Macaca_maura.k141_251854                                  43912 158 -     79256 T
e Ctenodactylus_gundi.CteGun_scaffold_447                  206336 0 -    956709 C
e Nomascus_annamensis.k141_1439838                            857 0 +      3718 C

a score=0.000000
s hg38.chr4_GL000008v2_random                                9915  9 +    209709 T---CTAG-A-----A-----TT
s Acinonyx_jubatus.LLWD01000356.1                         2031992  8 +   3721120 t---ctaG-A-----T-----T-
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    110663  7 -    189883 G---AGGG-A-----A-------
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 I 3
s Ailuropoda_melanoleuca.LNAT01000321.1                  10655336  8 +  23371972 T---CTAG-A-----T-----T-
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7092261  8 -  16596857 t---cTAG-A-----T-----T-
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   10990  4 -     22067 T---AAG----------------
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_3103707                  60932  9 +     61638 T---CTAG-A-----A-----TT
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        52740  9 +     53391 T---CTAG-A-----A-----TT
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         3465  9 +     72529 T---CTAG-A-----A-----TT
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          3040  9 +      3797 T---CTAG-A-----A-----TT
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             8214  7 -     18050 -----TAG-A-----G-----TT
i Alouatta_belzebul.k141_1818029                        I 1 C 0
s Alouatta_caraya.k141_5460                                  9327  7 -     11521 -----TAG-A-----G-----TT
i Alouatta_caraya.k141_5460                             I 1 C 0
s Alouatta_discolor.k141_811576                              8891  7 -     21359 -----TAG-A-----G-----TT
i Alouatta_discolor.k141_811576                         I 1 C 0
s Alouatta_juara.k141_298055                                  182  7 +      1823 -----TAG-A-----G-----TT
i Alouatta_juara.k141_298055                            I 1 C 0
s Alouatta_macconnelli.k141_1331706                          8182  7 -     10438 -----TAG-A-----G-----TT
i Alouatta_macconnelli.k141_1331706                     I 1 C 0
s Alouatta_nigerrima.k141_2718643                            4838  7 +      7047 -----TAG-A-----G-----TT
i Alouatta_nigerrima.k141_2718643                       I 1 C 0
s Alouatta_palliata.k141_1316127                             8124  7 +     10410 -----TAG-A-----G-----TT
i Alouatta_palliata.k141_1316127                        I 1 C 0
s Alouatta_puruensis.k141_1284840                            1927  7 -      4927 -----TAG-A-----G-----TT
i Alouatta_puruensis.k141_1284840                       I 1 C 0
s Alouatta_seniculus.k141_990213                             4857  7 +      6429 -----TAG-A-----G-----TT
i Alouatta_seniculus.k141_990213                        I 1 C 0
s Ammotragus_lervia.NIVO01013474.1                        3518775 12 +   4113121 T---CTAA-A-ATTTA-----C-
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      388924  5 -    631301 T---TTAG---------------
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 I 4
s Antilocapra_americana.AntAmePen_scaffold_42841            29361  6 +     33004 T---CTAA-A-------------
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 I 2
s Aotus_azarae.k141_3170768                                 60575  7 +     78111 -----TAG-A-----A-----TT
i Aotus_azarae.k141_3170768                             I 1 C 0
s Aotus_griseimembra.k141_3275623                            3516  7 +     22701 -----TAG-A-----A-----TT
i Aotus_griseimembra.k141_3275623                       I 1 C 0
s Aotus_nancymaae.KZ196176.1                              5747473  7 +   9889416 -----tag-a-----a-----tt
i Aotus_nancymaae.KZ196176.1                            I 1 C 0
s Aotus_trivirgatus.k141_1740727                             4058  7 -    104377 -----TAG-A-----A-----TT
i Aotus_trivirgatus.k141_1740727                        I 1 C 0
s Aotus_vociferans.k141_718647                               4064  7 +     23246 -----TAG-A-----A-----TT
i Aotus_vociferans.k141_718647                          I 1 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     2067  8 +      5067 T---CTAGAA-----T-------
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      16004  9 +     17483 T---TTAG-G-----A-----TT
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 7320 12 -     29036 T---CTAG-A-----TTTTA-T-
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9537308  7 +  39197703 -----TAG-A-----A-----TT
i Ateles_geoffroyi_b.tarseq_2582                           I 1 C 0
s Ateles_belzebuth.k141_1348307                             58592  7 +     85812 -----TAG-A-----A-----TT
i Ateles_belzebuth.k141_1348307                         I 1 C 0
s Ateles_chamek.k141_1072810                                 9591  7 +     89302 -----TAG-A-----A-----TT
i Ateles_chamek.k141_1072810                            I 1 C 0
s Ateles_geoffroyi_a.k141_1300742                             14096  7 -     58268 -----TAG-A-----A-----TT
i Ateles_geoffroyi_a.k141_1300742                         I 1 C 0
s Ateles_marginatus.k141_899112                             62087  7 +    119057 -----TAG-A-----A-----TT
i Ateles_marginatus.k141_899112                         I 1 C 0
s Ateles_paniscus.k141_1631200                               4056  7 -     25888 -----TAG-A-----A-----TT
i Ateles_paniscus.k141_1631200                          I 1 C 0
s Avahi_laniger.k141_2840928                                 4805  9 -     16375 T---CTAG-A-----A-----AT
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              1125  9 +      2719 T---CTAG-A-----A-----AT
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26378776 12 +  51448160 t---ctag-a-attta-----t-
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        4008 12 -     13118 t---ctag-a-attta-----t-
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   41842 12 -     72089 T---CTAA-A-ATTTA-----C-
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6557868 12 +   6870073 T---CTAA-A-ATTTA-----C-
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138138107 12 - 161108492 t---ctaa-a-attta-----c-
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     570481 12 -    998990 t---ctaa-a-attta-----c-
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136293840 12 - 158972876 t---ctaa-a-attta-----c-
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1229596 12 -   1914593 t---ctaa-a-attta-----c-
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               111949  7 -    171031 -----TAT-A-----A-----TT
i Cacajao_ayresi.k141_724503                            I 1 C 0
s Cacajao_calvus.k141_96166                                 10975  7 +    125063 -----TAT-A-----A-----TT
i Cacajao_calvus.k141_96166                             I 1 C 0
s Cacajao_hosomi.k141_303789                                13023  7 -    216513 -----TAT-A-----A-----TT
i Cacajao_hosomi.k141_303789                            I 1 C 0
s Cacajao_melanocephalus.k141_1160263                        5563  7 -    134917 -----TAT-A-----A-----TT
i Cacajao_melanocephalus.k141_1160263                   I 1 C 0
s Camelus_bactrianus.KN276303.1                           3218184  6 -   8989139 T---CTAG-A-------------
i Camelus_bactrianus.KN276303.1                         C 0 I 2
s Camelus_dromedarius.KN271192.1                           395889  6 -  15254737 T---CTAG-A-------------
i Camelus_dromedarius.KN271192.1                        C 0 I 2
s Camelus_ferus.KB016973.1                                2971622  6 +   6889770 T---CTAG-A-------------
i Camelus_ferus.KB016973.1                              C 0 I 2
s CanFam4.chr31                                          11516715  8 +  39901454 T---TTAG-A-----T-----T-
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   11733  8 +     87036 T---TTAG-A-----T-----T-
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11263376  8 -  35597290 t---ttag-a-----t-----t-
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11085905  8 +  39895921 t---ttag-a-----t-----t-
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16452929  8 -  44759192 t---ttag-a-----t-----t-
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21323851 12 + 157394656 T---CTAA-A-ATTTA-----C-
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135705078 12 - 157403528 T---CTAA-A-ATTTA-----C-
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_979108                   163  7 -      1248 T---CTAG-A-----A-------
i Capromys_pilorides.CapPil_scaffold_979108             C 0 C 0
s Carlito_syrichta.NW_007248099.1                          307162 10 +    345090 T---CTAG-A-----A----CTT
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               58115 13 +     67245 T---CTAG-A-----ATTTATT-
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   28606 10 +     33760 T---CTAG-AGAT--T-------
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   157397 12 -    276539 T---CCAG-A-ATTTA-----T-
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15784766  7 -  24422027 t---ctgg-a-----a-------
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15796698  7 -  24440124 t---ctgg-a-----a-------
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       174889  7 +    436027 T---CTGG-A-----A-------
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18888802  7 -  29618158 -----TAG-A-----A-----TT
i Cebus_albifrons.Contig22                              I 1 C 0
s Cebus_olivaceus.k141_93739                                 6346  7 -     26817 -----TAG-A-----A-----TT
i Cebus_olivaceus.k141_93739                            I 1 C 0
s Cebus_unicolor.k141_239009                                10586  7 +     25043 -----TAG-A-----A-----TT
i Cebus_unicolor.k141_239009                            I 1 C 0
s Cephalopachus_bancanus.k141_702587                         6195 10 +     21754 T---CTAG-A-----A----CTT
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4362492 12 +   7569818 t---ctag-a-----a-tttat-
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         2244 12 -      9338 T---CTAG-A-----ATTTA-T-
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6552724  9 +   6739814 T---CTAG-A-----A-----TT
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      54201  9 -     54931 T---CTAG-A-----A-----TT
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         19185  9 -     19697 T---CTGG-A-----A-----TT
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         56716  9 -    107033 T---CTAG-A-----G-----TT
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        3156  9 -      3853 T---CTAG-A-----A-----TT
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          27092  9 +     30494 T---CTAG-A-----A-----TT
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           3116  9 -      4022 T---CTAG-A-----A-----TT
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          3010  9 -      3505 T---CTAG-A-----A-----TT
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           21798  9 +     35983 T---CTAG-A-----A-----TT
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11988335  9 +  12117833 T---CTAG-A-----A-----TT
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46475088  9 +  46592721 T---CTAG-A-----A-----TT
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      32917  9 +     33420 T---CTAG-A-----A-----TT
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        2951  9 -      3443 T---CTAG-A-----A-----TT
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      3944  9 -      4669 T---CTAG-A-----A-----TT
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        3737  9 -      4411 T---CTAG-A-----A-----TT
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         3267  9 -      4205 T---CTAG-A-----A-----TT
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_2711798           292  9 -       616 T---CTAG-G-----A-----TT
i Chaetophractus_vellerosus.ChaVel_scaffold_2711798     n 413 I 1
s Cheirogaleus_major.k141_1157592                           57111  9 -     68416 T---CTAG-A-----A-----AT
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            6153  9 +     13308 T---CTAG-A-----A-----AT
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             3611  7 -     18223 -----CAG-A-----A-----TT
i Cheracebus_lucifer.k141_619653                        I 1 C 0
s Cheracebus_lugens.k141_203936                             20634  7 +     25473 -----CAG-A-----A-----TT
i Cheracebus_lugens.k141_203936                         I 1 C 0
s Cheracebus_regulus.k141_2128895                           39673  7 +     57117 -----CAG-A-----A-----TT
i Cheracebus_regulus.k141_2128895                       I 1 C 0
s Cheracebus_torquatus.k141_315545                          44348  7 +     54541 -----CAG-A-----A-----TT
i Cheracebus_torquatus.k141_315545                      I 1 C 0
s Chinchilla_lanigera.JH721867.1                         15959932  7 +  43084221 t---ctaa-a-----a-------
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         69171  7 +    196370 -----TAT-A-----A-----TT
i Chiropotes_israelita.k141_1189915                     I 1 C 0
s Chiropotes_sagulatus.k141_773804                          13351  7 +     40510 -----TAT-A-----A-----TT
i Chiropotes_sagulatus.k141_773804                      I 1 C 0
s Chlorocebus_aethiops.ctg22                             15136551  9 -  15256731 T---CTAG-A-----A-----TT
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      31597  9 -     53260 T---CTAG-A-----A-----TT
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101142046  9 + 101219884 T---CTAG-A-----a-----tt
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                15073  9 -     21363 T---CTAG-A-----A-----TT
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 I 1
s Choloepus_hoffmanni.KN194586.1                           760384  9 +    964067 T---CTAG-A-----A-----TT
i Choloepus_hoffmanni.KN194586.1                        C 0 I 1
s Colobus_angolensis.KN985967.1                          10880625  9 +  10971483 T---CTAG-A-----A-----TT
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147661783  9 + 156195979 T---CTAG-A-----A-----TT
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            13770  9 +     23629 T---CTAG-A-----A-----TT
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60611240  3 +  78930452 ---------a-----t-----t-
i Condylura_cristata.JH655880.1                         I 6 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         37831 12 -     40477 T---CTAG-A-----ATTT-TT-
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 I 376
s Cricetomys_gambianus.CriGam_scaffold_949                 276556  7 -    399297 T---ATGT-A-----A-------
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 I 3
s Cricetulus_griseus.LT883672.1                          53027181  6 +  72327488 ----attg-a-----a-------
i Cricetulus_griseus.LT883672.1                         C 0 I 3
s Crocidura_indochinensis.CroInd_scaffold_38409             18310  3 -     19186 ---------T-----T-----T-
i Crocidura_indochinensis.CroInd_scaffold_38409         I 1 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            50005  8 -     70449 T---CTAG-A-----T-----T-
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 28701  7 -     67205 T---CTAG-C-----A-------
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                15925  5 +     26546 -----TAG-A-----A-------
i Cuniculus_paca.CunPac_flattened_line_16637            I 1 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             57022  7 -    236241 T---CTAG-A-----A-------
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          180829 12 -   6883506 TCCTCTAG-G-----A-----TT
i Dasypus_novemcinctus.JH568778.1                       I 541 I 1
s Daubentonia_madagascariensis.ctg11                     16842966 10 +  31942871 T---CTAG-A-----AT----TT
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80035462 12 -  96802777 t---ctag-a-attta-----t-
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18697425 12 -  18957592 t---ctag-a-----a-tttat-
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 321139 12 +    993696 t---ctag-a-----a-tttat-
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   1791 12 +    151128 T---CTAG-A-----ATTTA-T-
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   155815  7 +    228994 T---CTAG-A-----A-------
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3653536  1 +   4240102 ---------------t-------
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 25100  1 +     28912 ---------------T-------
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                34283  7 -     73477 T---CTGG-A-----A-------
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22993180  9 -  44670279 T---CTAG-A-----A-----TT
i Echinops_telfairi.JH980316.1                          C 0 I 1
s Eidolon_helvum.KE772537.1                                 10804 12 +     24177 t---atag-a-----a-tttat-
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1490124 12 +   1727528 T---CCAA-A-ATTTA-----C-
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7804874  8 +  15467074 T---CAAC-A-----C------T
i Elephantulus_edwardii.JH947210.1                      C 0 I 1
s Ellobius_lutescens.LOEQ01003611.1                        237835  6 -    369425 ----ATgg-a-----a-------
i Ellobius_lutescens.LOEQ01003611.1                     C 0 I 3
s Ellobius_talpinus.LOJH01090055.1                           4851  6 -      7838 ----Atgg-a-----t-------
i Ellobius_talpinus.LOJH01090055.1                      C 0 I 3
s Enhydra_lutris.KZ291749.1                              85869789  8 +  99434291 T---CTAG-A-----T-----T-
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4702381 12 +   6522550 t---ctag-a-----a-tttat-
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5851562 12 -   7175178 t---ctag-a-----a-tttat-
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13350065 12 +  41866177 t---ctag-a-----a-tttat-
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          11555 12 +     92910 t---ctag-a-----a-tttat-
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11531107  3 +  16010500 ---------A-----T-----T-
i Erinaceus_europaeus.JH835290.1                        I 1 C 0
s Erythrocebus_patas.Contig8                             48768729  9 -  48907691 T---CTAG-A-----A-----TT
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          313663 12 +    330699 T---CTAG-A-ATTTA-----T-
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             60115 12 +     89355 T---CTAG-A-ATTTA-----T-
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              3157  9 +     13586 T---CTAG-A-----A-----AT
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               3092  9 -      6809 T---CTAG-A-----A-----AT
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             9567  9 +     36558 T---CTAG-A-----A-----AT
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             5882  9 +     60246 T---CTAG-A-----A-----TT
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 9365  9 +    109717 T---CTAG-A-----A-----AT
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               13744  9 +     16540 T---CTAG-A-----A-----TT
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                14020  9 +     27497 T---CTAG-A-----A-----AT
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           16486  9 +     26808 T---CTAG-A-----A-----AT
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                31210  9 +     46535 T---CTAG-A-----A-----AT
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              13933  9 -     29447 T---CTAG-A-----A-----AT
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129890968  8 - 159252932 t---ctaG-A-----T-----T-
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129278040  8 - 158578461 t---ctaG-A-----T-----T-
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 19175  8 +     52776 T---CTAG-A-----T-----T-
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13890877  7 -  19261668 T---ctag-a-----a-------
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     209067  9 -    847004 T---TTAG-A-----G-----TT
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           11448  9 -     43889 T---TTAG-A-----G-----TT
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           8514  9 +     27357 T---TTAG-A-----G-----TT
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               154422  9 +    324696 T---ATAG-A-----G-----CT
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 I 1
s Giraffa_tippelskirchi.LVKQ01S012154.1                    179924 12 -    189561 t---ctaa-a-attta-----c-
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           10834  7 -     18683 T---CAAA-T-----T-------
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               3313  9 -     14630 T---CTAG-A-----A-----TT
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119650412  9 - 195582420 T---CTAG-A-----A-----TT
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   75574  7 +    118900 T---CAAG-A-----T-------
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                         3717  9 +      3980 T---CTAG-A-----A-----AT
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             26193  9 +     26611 T---CTAG-A-----A-----AT
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             3653  9 +     56096 T---CTAG-A-----A-----AT
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        26930  9 -     42470 T---CTAG-A-----A-----AT
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        43524  9 -     54384 T---CTAG-A-----A-----AT
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              15211 10 +     53719 T---CTAG-A-----T---GGT-
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                26123 12 -     91191 T---CTAA-A-ATTTA-----C-
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2549265  7 +  31725842 t---ctag-a-----a-------
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               54690  9 +     73687 T---CTAA-A-----A-----TT
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 I 1
s Hippopotamus_amphibius.HipAmp_scaffold_1308              145692 12 +    277961 T---CTAG-T-ATTTA-----T-
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      277007 12 -    477199 T---CTAG-A-----ATTTA-t-
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              6167 12 -      9143 T---CTAG-A-----ATTTA-T-
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      2570  9 -   7690867 T---CTAG-A-----A-----TT
i Hoolock_leuconedys.ctg79                                 C 0 I 4
s Hyaena_hyaena.HyaHya_flattened_line_20729                 14268  8 -     67322 T---CTAG-A-----T-----T-
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           17185  7 -    119109 T---CTGG-A-----G-------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              3134  9 +      5897 T---CTAG-A-----A-----TT
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_1485652                              1554  9 -      1697 T---CTAG-A-----A-----TT
i Hylobates_agilis.k141_1485652                         C 0 C 0
s Hylobates_klossii.k141_466549                              9578  9 +     11537 T---CTAG-A-----A-----TT
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14622679  9 -  25970782 T---CTAG-A-----A-----TT
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1133650                            2569  9 -      2775 T---CTAG-A-----A-----TT
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             32066  9 -     60944 T---CTAG-A-----A-----TT
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     4312  7 +     22540 T---CTAG-A-----A-------
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7124199  8 +  13083262 t---cttgaa-----t-------
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_1884019                                   1397  9 -      2196 T---CTAG-A-----A-----AT
i Indri_indri.k141_1884019                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               7450 12 +     17520 T---CTAG-A-ATTTA-----T-
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8563729  4 +  11848649 T---AAC----------------
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               22275 12 +     37189 T---CTAG-A-ATTTA-----T-
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          48177  7 -    147782 -----TAG-A-----A-----TT
i Lagothrix_lagothricha.k141_12968                      I 1 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   112174 12 -    115756 T---CTAG-A-----ATTTA-T-
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258405213  9 - 285822530 T---CTAG-A-----A-----AT
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        22082  9 +     39228 T---CTAG-A-----G-----AT
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            51457  9 +     63517 T---CTAG-A-----G-----AT
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        76700  9 +    116806 T---CTAG-A-----A-----GC
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     29721  9 -     33031 T---CTAG-A-----G-----AT
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3084009  8 -   3498232 T---CTAG-A-----T-----T-
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    11188  9 +     22452 T---CTAG-A-----A-----TT
i Lepus_americanus.LepAme_scaffold_62849                C 0 I 1
s Lipotes_vexillifer.KE558548.1                            134610 12 +   3060487 t---ctag-a-attta-----t-
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19245812  9 +  19376315 T---CTAG-A-----A-----TT
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            8812  9 +     84689 T---TTAG-A-----A-----TT
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3776563  9 +   6799190 T---TTAG-A-----A-----TT
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20589486  9 -  62548349 T---CTAG-A-----A-----TT
i Loxodonta_africana.GL010040.1                         C 0 I 1
s Lycaon_pictus.CM007556.1                               11085361  8 +  39895028 t---ttag-a-----t-----t-
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             17496  9 +     74745 T---CTAG-A-----A-----TT
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12704002  9 +  12821369 T---CTAG-A-----A-----TT
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               6098  9 +      6569 T---CTAG-A-----A-----TT
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           44400  9 +     63263 T---CTAG-A-----A-----TT
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_925451                                  408  9 +     10231 T---CTAG-A-----A-----TT
i Macaca_fuscata.k119_925451                            C 0 C 0
s Macaca_leonina.k141_3421209                                2549  9 +      3017 T---CTAG-A-----A-----TT
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_mulatta.NC_041755.1                            196033079  9 + 196197964 T---CTAG-A-----A-----TT
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11443185  9 +  11645122 T---CTAG-A-----A-----TT
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_radiata.k141_1580474                                2941  9 -      3617 T---CTAG-A-----A-----TT
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 13271  9 -     55006 T---CTAG-A-----A-----TT
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43838308  9 +  43892939 T---CTAG-A-----A-----TT
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                5530  9 -      5978 T---CTAG-A-----A-----TT
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                700220 12 +    802869 T---CTAG-A-----ATTTA-T-
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43434974  9 -  43563597 T---CTAG-A-----A-----TT
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4447800  9 -   4543643 T---CTAG-A-----A-----TT
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            144716  8 +    252755 T---CTAA-A-----G-----T-
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             34791  8 +     58827 T---CTAA-A-----G-----T-
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36872034  8 +  64221397 t---cttgaa-----t-------
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       62880 12 -    234502 T---CTAG-A-----ATTTA-T-
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_146202             599  8 -      1999 T---CTAG-A-----T-----T-
i Mellivora_capensis.MelCap_flattened_line_146202       C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               10135  7 +     15977 G---AATG-A-----A-------
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 I 3
s Mesocricetus_auratus.KB708139.1                         1044920  6 -  26018355 ----attg-a-----a-------
i Mesocricetus_auratus.KB708139.1                       C 0 I 3
s Microcebus_murinus.CM007691.1                          16508332  9 +  47401472 t---ctag-a-----a-----tt
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  29605  9 -     48017 T---CTAG-A-----A-----TT
i Microgale_talazaci.MicTal_scaffold_34660              C 0 I 1
s Micronycteris_hirsuta.MicHir_scaffold_37978               21300 12 -     32043 T---CTAG-A-----ATTTA-T-
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22818038  6 -  98408828 ----ATgg-a-----a-------
i Microtus_ochrogaster.CM001673.1                       C 0 I 3
s Miniopterus_natalensis.LDJU01000022.1                   8208048 12 +  10048721 T---Ctgg-a-----a-cttat-
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            32720 12 +     45743 T---CTGG-A-----ACTTA-T-
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        33629  9 +     34273 T---CTAG-A-----A-----CT
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         9315  8 -    104932 T---CTAG-A-----T-----T-
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     3733  9 +      8497 T---CTAA-A-----A-----TT
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 145045 12 +    154973 T---CTAG-A-ATTTA-----T-
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                159806 12 +    265003 T---CTAG-A-----ATTTA-T-
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 3226 12 -      4346 T---CTAA-A-ATTTA-----C-
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  142902 10 -    168139 T---CTAG-A-----T---AGT-
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          17686 12 -    100666 T---CTAG-A-----ATTTA-T-
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70764524  7 +  92629107 G---AAGG-G-----A-------
i Mus_caroli.LT608236.1                                 C 0 I 3
s Mus_musculus.chr16                                     75487566  7 +  98207768 G---AAGG-G-----A-------
i Mus_musculus.chr16                                    C 0 I 3
s Mus_pahari.LT608305.1                                  67553761  7 +  89017189 G---AAgg-g-----a-------
i Mus_pahari.LT608305.1                                 C 0 I 3
s Mus_spretus.CM004110.1                                 74328748  7 +  97876770 G---AAGG-G-----A-------
i Mus_spretus.CM004110.1                                C 0 I 3
s Muscardinus_avellanarius.MusAve_scaffold_9643              9315  7 +     98495 T---CATG-A-----T-------
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4422171  8 -  28371801 T---CTAG-A-----T-----T-
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     88231  7 -    117718 T---GTAG-A-----A-------
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               966010 12 +   8389877 t---ctag-a-----a-tttat-
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5017700 12 +   6462685 t---ctag-a-----a-tttat-
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3463597 12 -   3747815 t---ctag-a-----a-tttat-
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         8791 12 +     66751 T---CTAG-A-----ATTTA-T-
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3671  9 -      8794 A---CTAG-A-----A-----TT
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 I 1
s Nannospalax_galili.KL201303.1                            108647  7 +    362372 T---AAGG-A-----A-------
i Nannospalax_galili.KL201303.1                         C 0 I 3
s Nasalis_larvatus.k141_153429                               6008  9 +     48152 T---CTAG-A-----A-----TT
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4482909  8 -  14209539 T---CTAG-A-----T-----T-
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3949658 12 -   4490290 T---ctag-a-attca-----t-
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  47913 12 +     94413 T---CTAG-A-----ATTTA-T-
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_concolor.k141_49591                               1104  9 +      2014 T---CTAG-A-----A-----TT
i Nomascus_concolor.k141_49591                          C 0 C 0
s Nomascus_gabriellae.k141_906566                            2432  9 -      2544 T---CTAG-A-----A-----TT
i Nomascus_gabriellae.k141_906566                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             22908  9 -  18771707 T---CTAG-A-----A-----TT
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                   657  9 +      4512 T---CTAG-A-----A-----TT
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                28354  8 +   3668941 t---ttag-a-----t-----t-
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65565451  9 -  95554990 T---TTAG-A-----A-----TT
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            2179  9 +      6470 T---TTAG-A-----A-----TT
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65667799  9 +  89412551 T---TTAG-A-----A-----TT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4994167  9 -  23139505 T---CTGG-A-----A-----TT
i Ochotona_princeps.JH802095.1                          C 0 I 1
s Octodon_degus.JH651621.1                                3683722  7 +  10294119 T---CTag-c-----a-------
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             677556  8 -   3126709 T---CTAG-A-----T-----T-
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1078354 12 +   1425656 T---CCAA-A-ATTTA-----C-
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         35649 12 +     78940 t---ctaa-a-attta-----c-
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  123311  6 +    145789 ----ATGA-A-----A-------
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 I 3
s Onychomys_torridus.OnyTor_scaffold_12578                  35067  6 +     62360 ----ATGG-A-----A-------
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 I 3
s Orcinus_orca.KB316965.1                                 7223342 12 -   7562323 t---ctag-a-attta-----t-
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              41726  9 -     66828 T---CTAG-A-----A-----TT
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 I 1
s Oryctolagus_cuniculus.CM000803.1                      141873846  9 + 163896628 t---ctag-a-----a-----tt
i Oryctolagus_cuniculus.CM000803.1                      C 0 I 1
s Otocyon_megalotis.JAEUCK010005121.1                      305692  8 -    505867 t---ttag-a-----t-----t-
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       37157  9 +     38679 T---TTAG-A-----G-----TT
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18006599  9 -  38779656 T---TTAG-A-----G-----TT
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134075916 12 - 275406953 T---CTAA-A-ATTTA-----C-
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      77130 12 +    140051 T---CTAA-A-ATTTA-----C-
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127572657  9 - 205426864 T---CTAG-A-----A-----TT
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120149810  9 - 196562556 T---CTAG-A-----A-----TT
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  32369  8 +    295523 T---CTAG-A-----T-----T-
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3636103  8 +  18214204 t---ctAG-A-----T-----T-
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5025750  8 -   6340057 t---ctaG-A-----T-----T-
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1064777 12 -   1292953 t---ctaa-a-attta-----c-
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188153756  9 - 188283584 T---CTAG-A-----A-----TT
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            49968  9 +     76494 T---CTAG-A-----A-----TT
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47511153  9 +  47705337 T---CTAG-A-----A-----TT
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 65130  9 -    104429 T---CTAG-A-----A-----TT
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  14921  9 -     29451 T---CTAG-A-----A-----TT
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                35324  9 +     35859 T---CTAG-A-----A-----TT
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113665  8 -    135482 T---CTAG-A-----T-----T-
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           3205  9 -     23713 T---TTAG-A-----A-----TT
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            22503  9 -     27972 T---TTAG-A-----A-----TT
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      41081  1 -     45160 ---------------T-------
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4948247  6 -   8017169 ----ATGG-a-----a-------
i Peromyscus_maniculatus.KI615518.1                     C 0 I 3
s Petromus_typicus.PetTyp_scaffold_33007                    10416  7 -     36578 T---CTAG-A-----A-------
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            119959 12 -    122454 T---CTAG-A-ATTCA-----T-
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           3014  9 -      3310 T---CTAG-A-----A-----TT
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       22919  9 -     82327 T---CTAG-A-----A-----TT
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           19666  9 +     19957 T---CTAG-A-----A-----TT
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26737680  9 +  26888534 T---CTAG-A-----A-----TT
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            95457 12 +    112873 T---CTAG-G-----ATTTA-T-
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             41658  7 -     61926 -----TAG-A-----A-----TT
i Pithecia_albicans.k141_991845                         I 1 C 0
s Pithecia_chrysocephala.k141_159118                        23087  7 +     78826 -----TAG-A-----A-----TT
i Pithecia_chrysocephala.k141_159118                    I 1 C 0
s Pithecia_hirsuta.k141_1152968                              7038  7 -     15800 -----TAG-A-----A-----TT
i Pithecia_hirsuta.k141_1152968                         I 1 C 0
s Pithecia_mittermeieri.k141_2119203                        10236  7 -     16101 -----TAG-A-----A-----TT
i Pithecia_mittermeieri.k141_2119203                    I 1 C 0
s Pithecia_pissinattii.k141_1102319                          3545  7 +      9673 -----TAG-A-----A-----TT
i Pithecia_pissinattii.k141_1102319                     I 1 C 0
s Pithecia_pithecia.tarseq_313                           13472539  7 -  19735023 -----TAG-A-----A-----TT
i Pithecia_pithecia.tarseq_313                          I 1 C 0
s Pithecia_vanzolinii.k141_831006                           11447  7 -     31692 -----TAG-A-----A-----TT
i Pithecia_vanzolinii.k141_831006                       I 1 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           4025 12 +     21690 T---CTAG-A-ATTTA-----T-
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       20883  7 +     44506 -----TAG-A-----A-----TT
i Plecturocebus_bernhardi.k141_959214                   I 1 C 0
s Plecturocebus_brunneus.k141_498086                        21093  7 +     67491 -----TAG-A-----A-----TT
i Plecturocebus_brunneus.k141_498086                    I 1 C 0
s Plecturocebus_caligatus.k141_2539816                      11334  7 -     98129 -----TAG-A-----A-----TT
i Plecturocebus_caligatus.k141_2539816                  I 1 C 0
s Plecturocebus_cinerascens.k141_744510                     20939  7 +    147771 -----TAG-A-----A-----TT
i Plecturocebus_cinerascens.k141_744510                 I 1 C 0
s Plecturocebus_cupreus.k141_1223294                        21189  7 -     23762 -----TAG-A-----A-----TT
i Plecturocebus_cupreus.k141_1223294                    I 1 C 0
s Plecturocebus_dubius.k141_3565563                          1655  7 -     55515 -----TAG-A-----A-----TT
i Plecturocebus_dubius.k141_3565563                     I 1 C 0
s Plecturocebus_grovesi.k141_242819                         21008  7 +    152463 -----TAG-A-----A-----TT
i Plecturocebus_grovesi.k141_242819                     I 1 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      7768  7 +      8943 -----TAG-A-----A-----TT
i Plecturocebus_hoffmannsi.k141_1595076                 I 1 C 0
s Plecturocebus_miltoni.k141_841561                         10728  7 +    134592 -----TAG-A-----A-----TT
i Plecturocebus_miltoni.k141_841561                     I 1 C 0
s Plecturocebus_moloch.k141_890597                          21318  7 -     75465 -----TAG-A-----A-----TT
i Plecturocebus_moloch.k141_890597                      I 1 C 0
s Pongo_abelii.NDHI03003816.1                              185205  9 -    373494 T---CTAG-A-----A-----TT
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19805113  9 +  19899266 T---CTAG-A-----A-----TT
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               3248  9 -     15069 T---CTAG-A-----A-----TT
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              3382  9 +     14865 T---CTAG-A-----A-----TT
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                74557  9 +     78963 T---CTAA-A-----A-----TT
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 I 1
s Prolemur_simus.MPIZ01000048.1                           6846589  9 +  12164890 t---ctag-a-----a-----at
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    665206  9 -   2312742 N---NNNN-N-----N-----NN
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         1731  9 +     11805 T---CTAG-A-----A-----AT
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           41066  9 +     52369 T---CTAG-A-----A-----AT
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         33455  9 -     44753 T---CTAG-A-----A-----AT
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            15376  9 +     27322 T---CTAG-A-----A-----AT
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       15015  9 -     53241 T---CTAG-A-----A-----AT
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         37286  9 -     48185 T---CTAG-A-----A-----AT
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           31675  7 +     77221 g---aatg-a-----a-------
i Psammomys_obesus.NESX01026517.1                       C 0 I 3
s Pteronotus_parnellii.KE867983.1                            2475 12 -     27784 T---CTAG-A-----ATGTA-T-
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        244265  8 -    344369 T---CTAG-A-----T-----T-
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13244605 12 -  17261082 t---ctag-a-----a-tttat-
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             602555 12 -   3946241 t---ctag-a-----a-tttat-
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131532333  8 - 161321710 t---CTAG-A-----T-----T-
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             27377  9 +     56732 T---CTAG-A-----A-----TT
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6803868  9 +   6970761 T---CTAG-A-----A-----TT
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             3261  9 +     18040 T---CTAG-A-----A-----TT
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                14431 12 +     68503 T---CCAA-A-ATTTG-----C-
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13913620  7 +  90463843 G---AAGA-A-----A-------
i Rattus_norvegicus.chr11                               C 0 I 3
s Rhinolophus_sinicus.LVEH01000179.1                      1786418 12 +   2252614 T---CTAG-A-----AGTTA-T-
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           13814  9 -     14454 T---CTAG-A-----A-----TT
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206375140  9 - 206558726 T---CTAG-A-----A-----TT
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44854040  9 -  45163003 T---CTAG-A-----A-----TT
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                17895 12 +    109198 T---CTAG-A-----ATTTA-T-
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       6233 12 +     12214 A---CTAA-A-ATTTA-----C-
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15670761  7 -  43202129 -----tag-a-----a-----tt
i Saimiri_boliviensis.NW_024100938.1                    I 1 C 0
s Saimiri_cassiquiarensis.k141_808270                        2627  7 +     34089 -----TAG-A-----A-----TT
i Saimiri_cassiquiarensis.k141_808270                   I 1 C 0
s Saimiri_macrodon.k141_2087127                              2568  7 -     60842 -----TAG-A-----A-----TT
i Saimiri_macrodon.k141_2087127                         I 1 C 0
s Saimiri_oerstedii.k141_841116                              2663  7 +     67014 -----TAG-A-----A-----TT
i Saimiri_oerstedii.k141_841116                         I 1 C 0
s Saimiri_sciureus.k141_1947592                              2641  7 +     60816 -----TAG-A-----A-----TT
i Saimiri_sciureus.k141_1947592                         I 1 C 0
s Saimiri_ustus.k141_1282476                                 2578  7 -     76454 -----TAG-A-----A-----TT
i Saimiri_ustus.k141_1282476                            I 1 C 0
s Sapajus_apella.ctg10                                   17339330  7 -  30362882 -----TAG-A-----A-----TT
i Sapajus_apella.ctg10                                  I 1 C 0
s Sapajus_macrocephalus.k141_966464                         18705  7 -     62485 -----TAG-A-----A-----TT
i Sapajus_macrocephalus.k141_966464                     I 1 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   29991  3 -    114521 ---------A-----T-----T-
i Scalopus_aquaticus.ScaAqu_scaffold_9300               I 6 C 0
s Semnopithecus_entellus.k141_1527475                       25803  6 +     26421 ------AG-A-----A-----TT
i Semnopithecus_entellus.k141_1527475                   I 1 C 0
s Semnopithecus_hypoleucos.k141_761524                       6263  6 +     20762 ------AG-A-----A-----TT
i Semnopithecus_hypoleucos.k141_761524                  I 1 C 0
s Semnopithecus_johnii.k141_1351450                         39998  6 +     40653 ------AG-A-----A-----TT
i Semnopithecus_johnii.k141_1351450                     I 1 C 0
s Semnopithecus_priam.k141_198153                           10555  6 -     12194 ------AG-A-----A-----TT
i Semnopithecus_priam.k141_198153                       I 1 C 0
s Semnopithecus_schistaceus.k141_653647                     23977  6 -     27512 ------AG-A-----A-----TT
i Semnopithecus_schistaceus.k141_653647                 I 1 C 0
s Semnopithecus_vetulus.k141_642050                         32996  6 -     33692 ------AG-A-----A-----TT
i Semnopithecus_vetulus.k141_642050                     I 1 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   97843  6 -    120886 ----ATAG-G-----A-------
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 I 3
s Solenodon_paradoxus.SolPar_flattened_line_1012            16626  3 +    739146 ---------A-----T-----T-
i Solenodon_paradoxus.SolPar_flattened_line_1012        I 1 C 0
s Spermophilus_dauricus.KZ294190.1                        2238115  8 +   2842873 t---cttgaa-----t-------
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             233017  8 -    276980 T---CTAG-A-----T-----T-
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            25570  8 +     62062 T---ATAG-A-----T-----T-
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189270484 12 + 218635234 T---CTAG-A-ATTTA-----C-
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        12936  9 -  13920577 T---CTAG-A-----A-----TT
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               4420 12 -      6213 T---CTAT-G-----ATTTA-T-
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               13347  9 +     45698 G---CTAG-A-----A-----TT
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 I 1
s Tapirus_indicus.TapInd_scaffold_176                      805344 12 +   1148477 T---CTAC-A-----ATTTA-T-
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  56004 12 +     99546 T---CTAC-A-----ATTTA-T-
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               24645 10 +     42269 T---CTGG-A-----A----CTT
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               57961 10 +     65473 T---CTGG-A-----A----CTT
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194005292  9 - 194193292 T---CTAG-A-----A-----TT
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             37477  7 -     47444 T---CTAG-A-----A-------
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  2784  9 +      6782 T---CTAG-G-----A-----TT
i Tolypeutes_matacus.TolMat_scaffold_269431             I 565 I 1
s Tonatia_saurophila.TonSau_scaffold_3334                  134484 12 -    259118 T---CTAG-A-----ATTTA-T-
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        24373  6 +     38948 ------AG-A-----A-----TT
i Trachypithecus_auratus.k141_738098                    I 1 C 0
s Trachypithecus_crepusculus.k141_1588528                   18100  6 -     32910 ------AG-A-----A-----TT
i Trachypithecus_crepusculus.k141_1588528               I 1 C 0
s Trachypithecus_cristatus.k141_27198                       23998  6 +     24652 ------AG-A-----A-----TT
i Trachypithecus_cristatus.k141_27198                   I 1 C 0
s Trachypithecus_francoisi.k141_1178450                      2876  6 -      3559 ------AG-A-----A-----TT
i Trachypithecus_francoisi.k141_1178450                 I 1 C 0
s Trachypithecus_geei.k141_670367                           40820  6 -     54611 ------AG-A-----A-----TT
i Trachypithecus_geei.k141_670367                       I 1 C 0
s Trachypithecus_germaini.k141_809503                       16821  6 +     17312 ------AG-A-----A-----TT
i Trachypithecus_germaini.k141_809503                   I 1 C 0
s Trachypithecus_hatinhensis.k141_357672                    24184  6 -     25040 ------AG-A-----A-----TT
i Trachypithecus_hatinhensis.k141_357672                I 1 C 0
s Trachypithecus_laotum.k141_171445                          2845  6 +      3528 ------AG-A-----A-----TT
i Trachypithecus_laotum.k141_171445                     I 1 C 0
s Trachypithecus_leucocephalus.k141_283605                  49212  6 +     51589 ------AG-A-----A-----TT
i Trachypithecus_leucocephalus.k141_283605              I 1 C 0
s Trachypithecus_melamera.k141_238507                       12388  6 +     14732 ------AG-A-----A-----TT
i Trachypithecus_melamera.k141_238507                   I 1 C 0
s Trachypithecus_obscurus.k141_1115109                       2865  6 -     28054 ------AG-A-----A-----TT
i Trachypithecus_obscurus.k141_1115109                  I 1 C 0
s Trachypithecus_phayrei.ctg3                            44657660  6 -  44834318 ------AG-A-----A-----TT
i Trachypithecus_phayrei.ctg3                           I 1 C 0
s Trachypithecus_pileatus.k141_469329                        2669  6 +      3372 ------AG-A-----A-----TT
i Trachypithecus_pileatus.k141_469329                   I 1 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   3832 12 +     90398 T---CTAA-A-AGTTA-----T-
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16079936  9 +  31416278 T---CTAG-A-----A-----TT
i Trichechus_manatus.JH594618.1                         C 0 I 1
s Tupaia_chinensis.KB320831.1                             2790576  9 -   3938065 T---CTAA-A-----G-----TT
i Tupaia_chinensis.KB320831.1                           C 0 I 1
s Tupaia_tana.TupTan_flattened_line_68454                    3100  9 +     13056 T---CTAA-A-----G-----TT
i Tupaia_tana.TupTan_flattened_line_68454               C 0 I 1
s Tursiops_truncatus.MRVK01000923.1                      69312059 12 -  96451834 t---ctag-a-attta-----t-
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 25191  3 -     25548 ---------A-----T-----T-
i Uropsilus_gracilis.UroGra_scaffold_4143_0             I 6 C 0
s Ursus_maritimus.KK498671.1                              6512821  8 +  28682327 t---ctAG-A-----T-----T-
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  3430  9 -     20643 T---CTAG-A-----A-----TT
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             22974  9 -     33872 T---CTAG-A-----A-----TT
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1523293  6 -   2331223 T---CTAG-A-------------
i Vicugna_pacos.KN269600.1                              C 0 I 2
s Vulpes_lagopus.VulLag_flattened_line_2045                135761  8 -    281493 T---TTAG-A-----T-----T-
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       125206  8 -    134049 T---CTAGAA-----T-------
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        212291  8 -    227762 T---CTAG-A-----T-----T-
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     13445  4 -     20485 T---AAA----------------
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           5556 12 -      8775 T---CTAG-A-ATTTA-----T-
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Sorex_araneus.JH798170.1                               17748817 583 -  27805282 I
e Chrysochloris_asiatica.ChrAsi_scaffold_141308              7099  0 -     12508 C
e Mesoplodon_bidens.MesBid_scaffold_183284                   2166 255 +      2166 T
e Macaca_tonkeana.k141_2870633                               2864 158 -     27140 T
e Macaca_nigra.k141_282495                                   2859 158 -     46448 T
e Macaca_maura.k141_251854                                  43912 158 -     79256 T
e Ctenodactylus_gundi.CteGun_scaffold_447                  206336  0 -    956709 C
e Nomascus_annamensis.k141_1439838                            857  0 +      3718 C

a score=0.000000
s hg38.chr4_GL000008v2_random                                9924 4 +    209709 G--T----T-T
s Acinonyx_jubatus.LLWD01000356.1                         2032000 1 +   3721120 ----------T
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    110673 4 -    189883 A--T----T-T
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 3 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10655344 2 +  23371972 --------T-T
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7092269 2 -  16596857 --------T-T
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   10994 3 -     22067 ---T----T-G
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_3103707                  60941 4 +     61638 G--T----T-T
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        52749 4 +     53391 G--T----T-T
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         3474 4 +     72529 G--T----T-T
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          3049 4 +      3797 G--T----T-T
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             8221 6 -     18050 GTTT----T-T
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  9334 6 -     11521 GTTT----T-T
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              8898 6 -     21359 GTTT----T-T
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_298055                                  189 6 +      1823 GTTT----T-T
i Alouatta_juara.k141_298055                            C 0 C 0
s Alouatta_macconnelli.k141_1331706                          8189 6 -     10438 GTTT----T-T
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            4845 6 +      7047 GTTT----T-T
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             8131 6 +     10410 GTTT----T-T
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            1934 6 -      4927 GTTT----T-T
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             4864 6 +      6429 GTTT----T-T
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3518787 2 +   4113121 --------T-T
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            29369 1 +     33004 ----------T
i Antilocapra_americana.AntAmePen_scaffold_42841        I 2 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      388933 1 -    631301 --------T--
i Anoura_caudifer.AnoCau_scaffold_422                   I 4 C 0
s Aotus_azarae.k141_3170768                                 60582 6 +     78111 GTTT----T-T
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            3523 6 +     22701 GTTT----T-T
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5747480 6 +   9889416 gttt----t-t
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             4065 6 -    104377 GTTT----T-T
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               4071 6 +     23246 GTTT----T-T
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     2075 6 +      5067 T--T--GTT-T
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      16013 5 +     17483 T-CT----T-T
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9537315 6 +  39197703 GTTT----T-T
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             58599 6 +     85812 GTTT----T-T
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 9598 6 +     89302 GTTT----T-T
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             14103 6 -     58268 GTTT----T-T
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             62094 6 +    119057 GTTT----T-T
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               4063 6 -     25888 GTTT----T-T
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 4814 5 -     16375 T-AT----T-T
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              1134 5 +      2719 T-AT----T-T
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26378788 2 +  51448160 --------t-t
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        4020 2 -     13118 --------t-t
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   41854 2 -     72089 --------T-T
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6557880 2 +   6870073 --------T-T
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138138119 2 - 161108492 --------t-t
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     570493 2 -    998990 --------t-t
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136293852 2 - 158972876 --------t-t
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1229608 2 -   1914593 --------t-t
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               111956 6 -    171031 GTTT----T-T
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 10982 6 +    125063 GTTT----T-T
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                13030 6 -    216513 GTTT----T-T
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        5570 6 -    134917 GTTT----T-T
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3218192 2 -   8989139 --------T-T
i Camelus_bactrianus.KN276303.1                         I 2 C 0
s Camelus_dromedarius.KN271192.1                           395897 2 -  15254737 --------T-T
i Camelus_dromedarius.KN271192.1                        I 2 C 0
s Camelus_ferus.KB016973.1                                2971630 2 +   6889770 --------T-T
i Camelus_ferus.KB016973.1                              I 2 C 0
s CanFam4.chr31                                          11516723 2 +  39901454 --------T-T
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   11741 2 +     87036 --------T-T
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11263384 2 -  35597290 --------t-t
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11085913 2 +  39895921 --------t-t
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16452937 2 -  44759192 --------t-t
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21323863 2 + 157394656 --------T-T
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135705090 2 - 157403528 --------T-T
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_979108                   170 6 -      1248 T--T--TAA-A
i Capromys_pilorides.CapPil_scaffold_979108             C 0 C 0
s Carlito_syrichta.NW_007248099.1                          307172 4 +    345090 G--T----T-T
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   28616 4 +     33760 A--T----T-T
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   157409 2 -    276539 --------T-T
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15784773 6 -  24422027 t--t-t-aa-a
i Cavia_aperea.AVPZ01000278.1                           C 0 I 1
s Cavia_porcellus.DS562889.1                             15796705 6 -  24440124 t--t-t-aa-a
i Cavia_porcellus.DS562889.1                            C 0 I 1
s Cavia_tschudii.CavTsc_scaffold_488                       174896 6 +    436027 T--T--TAA-A
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 I 1
s Cebus_albifrons.Contig22                               18888809 6 -  29618158 GTTT----T-T
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 6353 6 -     26817 GTTT----T-T
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                10593 6 +     25043 GTTT----T-T
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         6205 4 +     21754 G--T----T-T
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4362504 2 +   7569818 --------t-t
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         2256 2 -      9338 --------T-T
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6552733 4 +   6739814 G--T----T-T
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      54210 4 -     54931 G--T----T-T
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         19194 4 -     19697 G--T----T-T
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         56725 4 -    107033 G--T----T-T
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        3165 4 -      3853 G--T----T-T
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          27101 4 +     30494 G--T----T-T
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           3125 4 -      4022 G--T----T-T
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          3019 4 -      3505 G--T----T-T
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           21807 4 +     35983 G--T----T-T
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11988344 4 +  12117833 G--T----T-T
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46475097 4 +  46592721 G--T----T-T
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      32926 4 +     33420 G--T----T-T
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        2960 4 -      3443 G--T----T-T
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      3953 4 -      4669 G--T----T-T
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        3746 4 -      4411 G--T----T-T
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         3276 4 -      4205 G--T----T-T
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           57120 4 -     68416 T--T----T-T
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            6162 4 +     13308 T--T----T-T
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             3618 6 -     18223 GTTT----T-T
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             20641 6 +     25473 GTTT----T-T
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           39680 6 +     57117 GTTT----T-T
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          44355 6 +     54541 GTTT----T-T
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15959939 6 +  43084221 t--t-t-aa-a
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         69178 6 +    196370 GTTT----T-T
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          13358 6 +     40510 GTTT----T-T
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15136560 4 -  15256731 G--T----T-T
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      31606 4 -     53260 G--T----T-T
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101142055 4 + 101219884 g--t----t-t
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                15083 4 -     21363 G--C----T-T
i Choloepus_didactylus.ChoDid_scaffold_36182            I 1 C 0
s Choloepus_hoffmanni.KN194586.1                           760394 4 +    964067 G--C----T-T
i Choloepus_hoffmanni.KN194586.1                        I 1 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_141308              7099 1 -     12508 ----------T
i Chrysochloris_asiatica.ChrAsi_scaffold_141308         C 0 C 0
s Colobus_angolensis.KN985967.1                          10880634 4 +  10971483 G--T----T-T
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147661792 4 + 156195979 G--T----T-T
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            13779 4 +     23629 G--T----T-T
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60611243 2 +  78930452 --------t-a
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         38219 2 -     40477 --------t-t
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     I 376 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 276566 4 -    399297 A--T----T-T
i Cricetomys_gambianus.CriGam_scaffold_949              I 3 C 0
s Cricetulus_griseus.LT883672.1                          53027190 4 +  72327488 a--t----t-a
i Cricetulus_griseus.LT883672.1                         I 3 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             18313 2 -     19186 --------T-A
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            50013 3 -     70449 --------TTT
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 28708 6 -     67205 T--T--TAA-A
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                15930 6 +     26546 T--T--TAA-A
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             57029 6 -    236241 T--T--TAA-C
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16842976 4 +  31942871 G--T----T-T
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80035474 2 -  96802777 --------t-t
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18697437 1 -  18957592 --------t--
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 321151 2 +    993696 --------t-t
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   1803 2 +    151128 --------T-T
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   155822 6 +    228994 T--A--TAA-A
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3653537 5 +   4240102 t-at----t-t
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 25101 5 +     28912 T-AT----T-T
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                34290 6 -     73477 T--T--TAG-G
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 I 1
s Eidolon_helvum.KE772537.1                                 10816 2 +     24177 --------t-t
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1490136 2 +   1727528 --------T-T
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Echinops_telfairi.JH980316.1                           22993190 3 -  44670279 GT-T-------
i Echinops_telfairi.JH980316.1                          I 1 C 0
s Elephantulus_edwardii.JH947210.1                        7804883 5 +  15467074 T-GC----T-T
i Elephantulus_edwardii.JH947210.1                      I 1 C 0
s Ellobius_lutescens.LOEQ01003611.1                        237844 4 -    369425 a--t----t-a
i Ellobius_lutescens.LOEQ01003611.1                     I 3 C 0
s Ellobius_talpinus.LOJH01090055.1                           4860 4 -      7838 a--t----t-a
i Ellobius_talpinus.LOJH01090055.1                      I 3 C 0
s Enhydra_lutris.KZ291749.1                              85869797 2 +  99434291 --------T-T
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4702393 2 +   6522550 --------t-t
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5851574 2 -   7175178 --------t-t
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13350077 2 +  41866177 --------t-t
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          11567 2 +     92910 --------t-t
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11531110 2 +  16010500 --------A-C
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48768738 4 -  48907691 G--T----T-T
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          313675 2 +    330699 --------T-T
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             60127 2 +     89355 --------T-T
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              3166 4 +     13586 T--T----T-T
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               3101 4 -      6809 T--T----T-T
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             9576 4 +     36558 T--T----T-T
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             5891 4 +     60246 T--T----T-T
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 9374 4 +    109717 T--T----T-T
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               13753 4 +     16540 T--T----T-T
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                14029 4 +     27497 T--T----T-T
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           16495 4 +     26808 T--T----T-T
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                31219 4 +     46535 T--T----T-T
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              13942 4 -     29447 T--T----T-T
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129890976 1 - 159252932 ----------T
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129278048 1 - 158578461 ----------T
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 19183 1 +     52776 ----------T
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13890884 8 -  19261668 t--tgtttt-a
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     209076 5 -    847004 T-CT----T-T
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           11457 5 -     43889 T-CT----T-T
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           8523 5 +     27357 T-CT----T-T
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               154432 4 +    324696 G--T----T-T
i Galeopterus_variegatus.GalVar_scaffold_354            I 1 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    179936 2 -    189561 --------t-t
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           10841 6 -     18683 T--T--GTT-T
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               3322 4 -     14630 G--T----T-T
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119650421 4 - 195582420 G--T----t-t
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   75581 6 +    118900 T--T--GTT-T
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                         3726 4 +      3980 T--T----T-T
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             26202 4 +     26611 T--T----T-T
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             3662 4 +     56096 T--T----T-T
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        26939 4 -     42470 T--T----T-T
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        43533 4 -     54384 T--T----T-T
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              15221 3 +     53719 --------TTT
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                26135 2 -     91191 --------T-T
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2549272 6 +  31725842 t--t-tt-a-a
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               54700 4 +     73687 G--C----C-C
i Heterohyrax_brucei.HetBruBak_scaffold_25354           I 1 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              145704 2 +    277961 --------T-T
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      277019 3 -    477199 --------cct
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              6179 3 -      9143 --------CCT
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg649                                   100002 4 +    115816 G--T----T-T
i Hoolock_leuconedys.ctg649                                I 77 I 81
s Hyaena_hyaena.HyaHya_flattened_line_20729                 14276 3 -     67322 --------TTT
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 I 45
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           17192 6 -    119109 T--T--TAA-A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 I 1
s Hylobates_abbotti.k141_493872                              3143 4 +      5897 G--T----T-T
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_1485652                              1563 4 -      1697 G--T----T-T
i Hylobates_agilis.k141_1485652                         C 0 C 0
s Hylobates_klossii.k141_466549                              9587 4 +     11537 G--T----T-T
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14622688 4 -  25970782 G--T----T-T
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1133650                            2578 4 -      2775 G--T----T-T
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             32075 4 -     60944 G--T----T-T
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     4319 6 +     22540 T--T--TTA-C
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7124207 6 +  13083262 t--tg--gt-t
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_1884019                                   1406 5 -      2196 T-AT----T-T
i Indri_indri.k141_1884019                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               7462 2 +     17520 --------T-T
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8563733 3 +  11848649 ---T----T-G
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               22287 2 +     37189 --------T-T
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          48184 6 -    147782 GTTT----T-T
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   112186 2 -    115756 --------T-T
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258405222 4 - 285822530 T--T----T-T
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        22091 4 +     39228 T--T----T-T
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            51466 4 +     63517 T--T----T-T
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        76709 5 +    116806 C-GT----C-C
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     29730 4 -     33031 T--T----T-T
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3084017 2 -   3498232 --------T-T
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    11198 4 +     22452 T--T----T-T
i Lepus_americanus.LepAme_scaffold_62849                I 1 C 0
s Lipotes_vexillifer.KE558548.1                            134622 2 +   3060487 --------t-t
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19245821 4 +  19376315 G--T----T-T
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            8821 5 +     84689 T-CT----T-T
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3776572 5 +   6799190 T-CT----T-T
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20589496 4 -  62548349 G--C----T-T
i Loxodonta_africana.GL010040.1                         I 1 C 0
s Lycaon_pictus.CM007556.1                               11085369 2 +  39895028 --------t-t
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             17505 4 +     74745 G--T----T-T
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12704011 4 +  12821369 G--T----T-T
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               6107 4 +      6569 G--T----T-T
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           44409 4 +     63263 G--T----T-T
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_925451                                  417 4 +     10231 G--T----T-T
i Macaca_fuscata.k119_925451                            C 0 C 0
s Macaca_leonina.k141_3421209                                2558 4 +      3017 G--T----T-T
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_mulatta.NC_041755.1                            196033088 4 + 196197964 G--T----T-T
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11443194 4 +  11645122 G--T----T-T
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_radiata.k141_1580474                                2950 4 -      3617 G--T----T-T
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 13280 4 -     55006 G--T----T-T
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43838317 4 +  43892939 G--T----T-T
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                5539 4 -      5978 G--T----T-T
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                700232 2 +    802869 --------T-T
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43434983 4 -  43563597 G--T----T-T
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4447809 4 -   4543643 G--T----T-T
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            144724 2 +    252755 --------T-T
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             34799 2 +     58827 --------T-T
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36872042 6 +  64221397 t--tg--gt-t
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       62892 2 -    234502 --------T-C
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_146202             607 2 -      1999 --------T-T
i Mellivora_capensis.MelCap_flattened_line_146202       C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               10145 4 +     15977 A--T----T-T
i Meriones_unguiculatus.MerUng_scaffold_52233           I 3 C 0
s Mesocricetus_auratus.KB708139.1                         1044929 4 -  26018355 a--t----t-a
i Mesocricetus_auratus.KB708139.1                       I 3 C 0
s Microcebus_murinus.CM007691.1                          16508341 4 +  47401472 t--t----t-t
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  29615 4 -     48017 GT-T----T--
i Microgale_talazaci.MicTal_scaffold_34660              I 1 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               21312 1 -     32043 --------T--
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22818047 4 -  98408828 a--t----t-a
i Microtus_ochrogaster.CM001673.1                       I 3 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8208060 2 +  10048721 --------t-t
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            32732 2 +     45743 --------T-T
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        33638 4 +     34273 G--T----T-T
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         9323 2 -    104932 --------T-T
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     3742 3 +      8497 T--T----T--
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 145057 2 +    154973 --------T-T
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                159818 1 +    265003 --------T--
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 3238 2 -      4346 --------T-T
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  142912 3 -    168139 --------TTT
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          17698 2 -    100666 --------T-T
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70764534 4 +  92629107 a--t----c-t
i Mus_caroli.LT608236.1                                 I 3 C 0
s Mus_musculus.chr16                                     75487576 4 +  98207768 a--t----c-t
i Mus_musculus.chr16                                    I 3 C 0
s Mus_pahari.LT608305.1                                  67553771 4 +  89017189 a--t----t-t
i Mus_pahari.LT608305.1                                 I 3 C 0
s Mus_spretus.CM004110.1                                 74328758 4 +  97876770 a--t----c-a
i Mus_spretus.CM004110.1                                I 3 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              9322 6 +     98495 T--T--GTT-T
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4422179 2 -  28371801 --------T-T
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     88238 6 -    117718 C--T--TAA-A
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               966022 2 +   8389877 --------t-t
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5017712 2 +   6462685 --------t-t
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3463609 2 -   3747815 --------t-t
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         8803 2 +     66751 --------T-T
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3681 4 -      8794 G--C----T-T
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        I 1 C 0
s Nannospalax_galili.KL201303.1                            108657 4 +    362372 A--T----G-T
i Nannospalax_galili.KL201303.1                         I 3 C 0
s Nasalis_larvatus.k141_153429                               6017 4 +     48152 G--T----T-T
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4482917 2 -  14209539 --------T-T
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3949670 2 -   4490290 --------t-t
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Nomascus_annamensis.k141_1439838                            857 1 +      3718 ----------T
i Nomascus_annamensis.k141_1439838                      C 0 I 36
s Noctilio_leporinus.NocLep_scaffold_12062                  47925 1 +     94413 --------T--
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_concolor.k141_49591                               1113 4 +      2014 G--T----T-T
i Nomascus_concolor.k141_49591                          C 0 C 0
s Nomascus_gabriellae.k141_906566                            2441 3 -      2544 G--T----T--
i Nomascus_gabriellae.k141_906566                       C 0 T 420
s Nomascus_siki_b.tarseq_80                             22917 4 -  18771707 G--T----T-T
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                   666 4 +      4512 G--T----T-T
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                28362 2 +   3668941 --------t-t
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65565460 5 -  95554990 T-CT----T-T
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            2188 5 +      6470 T-CT----T-T
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65667808 5 +  89412551 T-CT----T-T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4994177 4 -  23139505 G--T----T-T
i Ochotona_princeps.JH802095.1                          I 1 C 0
s Octodon_degus.JH651621.1                                3683729 6 +  10294119 t--t-t-aa-a
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             677564 2 -   3126709 --------T-T
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1078366 2 +   1425656 --------T-T
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         35661 2 +     78940 --------t-t
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  123320 4 +    145789 A--T----T-A
i Ondatra_zibethicus.OndZib_scaffold_6821               I 3 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  35076 4 +     62360 A--T----T-G
i Onychomys_torridus.OnyTor_scaffold_12578              I 3 C 0
s Orcinus_orca.KB316965.1                                 7223354 2 -   7562323 --------t-t
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              41736 5 -     66828 TT-T----T-T
i Orycteropus_afer.OryAfe_flattened_line_13509          I 1 C 0
s Oryctolagus_cuniculus.CM000803.1                      141873856 4 + 163896628 t--t----t-t
i Oryctolagus_cuniculus.CM000803.1                      I 1 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      305700 2 -    505867 --------t-t
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       37166 5 +     38679 T-CT----T-T
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18006608 5 -  38779656 T-CT----T-T
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134075928 2 - 275406953 --------T-T
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      77142 2 +    140051 --------T-T
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127572666 4 - 205426864 G--T----t-t
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120149819 4 - 196562556 G--T----t-t
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  32377 2 +    295523 --------T-T
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3636111 2 +  18214204 --------T-T
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5025758 2 -   6340057 --------T-T
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1064789 2 -   1292953 --------t-t
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188153765 4 - 188283584 G--T----T-T
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            49977 4 +     76494 G--T----T-T
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47511162 4 +  47705337 G--T----T-T
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 65139 4 -    104429 G--T----T-T
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  14930 4 -     29451 G--T----T-T
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                35333 4 +     35859 G--T----T-T
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113673 3 -    135482 --------TTT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           3214 5 -     23713 T-CT----T-T
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            22512 5 -     27972 T-CT----T-T
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      41082 4 -     45160 T--T----T-T
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4948256 4 -   8017169 a--t----t-g
i Peromyscus_maniculatus.KI615518.1                     I 3 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    10423 6 -     36578 T--T--TTA-A
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            119971 2 -    122454 --------T-T
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           3023 4 -      3310 G--T----T-T
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       22928 4 -     82327 G--T----T-T
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           19675 4 +     19957 G--T----T-T
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26737689 4 +  26888534 G--T----T-T
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            95469 2 +    112873 --------T-T
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             41665 6 -     61926 GTTT----T-T
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        23094 6 +     78826 GTTT----T-T
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              7045 6 -     15800 GTTT----C-T
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        10243 6 -     16101 GTTT----C-T
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          3552 6 +      9673 GTTT----C-T
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13472546 6 -  19735023 GTTT----T-T
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           11454 6 -     31692 GTTT----C-T
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           4037 2 +     21690 --------T-T
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       20890 6 +     44506 GTTT----T-T
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        21100 6 +     67491 GTTT----T-T
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      11341 6 -     98129 GTTT----T-T
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     20946 6 +    147771 GTTT----T-T
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        21196 6 -     23762 GTTT----T-T
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          1662 6 -     55515 GTTT----T-T
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         21015 6 +    152463 GTTT----T-T
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      7775 6 +      8943 GTTT----T-T
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                         10735 6 +    134592 GTTT----T-T
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          21325 6 -     75465 GTTT----T-T
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              185214 4 -    373494 G--T----t-t
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19805122 4 +  19899266 G--T----T-T
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               3257 4 -     15069 G--T----T-T
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              3391 4 +     14865 G--T----T-T
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                74567 4 +     78963 G--C----C-C
i Procavia_capensis.ProCapCap_scaffold_15315            I 1 C 0
s Prolemur_simus.MPIZ01000048.1                           6846598 4 +  12164890 t--t----t-t
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    665215 5 -   2312742 N-NN----N-N
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         1740 5 +     11805 T-AT----T-T
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           41075 5 +     52369 T-AT----T-T
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         33464 5 -     44753 T-AT----T-T
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            15385 5 +     27322 T-AT----T-T
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       15024 5 -     53241 T-AT----T-T
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         37295 5 -     48185 T-AT----T-T
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           31685 4 +     77221 a--t----t-t
i Psammomys_obesus.NESX01026517.1                       I 3 C 0
s Pteronotus_parnellii.KE867983.1                            2487 1 -     27784 --------T--
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        244273 2 -    344369 --------T-T
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13244617 2 -  17261082 --------t-t
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             602567 2 -   3946241 --------t-t
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131532341 1 - 161321710 ----------T
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             27386 4 +     56732 G--T----T-T
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6803877 4 +   6970761 G--T----T-T
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             3270 4 +     18040 G--T----T-T
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                14443 2 +     68503 --------T-T
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13913630 4 +  90463843 A--C----C-T
i Rattus_norvegicus.chr11                               I 3 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1786430 3 +   2252614 --------TCT
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           13823 4 -     14454 G--T----T-T
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206375149 4 - 206558726 G--T----T-T
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44854049 4 -  45163003 G--T----T-T
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                17907 2 +    109198 --------T-T
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       6245 2 +     12214 --------T-T
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15670768 6 -  43202129 gttt----t-t
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        2634 6 +     34089 GTTT----T-T
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              2575 6 -     60842 GTTT----T-T
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              2670 6 +     67014 GTTT----T-T
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              2648 6 +     60816 GTTT----T-T
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 2585 6 -     76454 GTTT----T-T
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17339337 6 -  30362882 GTTT----C-T
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         18712 6 -     62485 GTTT----C-T
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   29994 2 -    114521 --------T-A
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1527475                       25809 4 +     26421 G--T----T-T
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       6269 4 +     20762 G--T----T-T
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         40004 4 +     40653 G--T----T-T
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                           10561 4 -     12194 G--T----T-T
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     23983 4 -     27512 G--T----T-T
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         33002 4 -     33692 G--T----T-T
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   97852 4 -    120886 A--T----T-A
i Sigmodon_hispidus.SigHis_scaffold_11332               I 3 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            16629 2 +    739146 --------T-C
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2238123 6 +   2842873 t--tg--gt-t
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             233025 2 -    276980 --------T-T
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            25578 3 +     62062 --------TTT
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189270496 2 + 218635234 --------T-T
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        12945 4 -  13920577 G--T----T-T
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               4432 2 -      6213 --------T-T
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               13357 4 +     45698 G--C----T-T
i Tamandua_tetradactyla.TamTet_scaffold_26877           I 1 C 0
s Tapirus_indicus.TapInd_scaffold_176                      805356 2 +   1148477 --------T-T
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  56016 2 +     99546 --------T-T
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               24655 4 +     42269 G--T----T-T
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               57971 4 +     65473 G--T----T-T
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194005301 4 - 194193292 G--T----T-T
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             37484 6 -     47444 T--T--TTT-A
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  134496 1 -    259118 --------T--
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        24379 4 +     38948 G--T----T-T
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   18106 4 -     32910 G--T----T-T
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       24004 4 +     24652 G--T----T-T
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      2882 4 -      3559 G--T----T-T
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           40826 4 -     54611 G--T----T-T
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       16827 4 +     17312 G--T----T-T
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    24190 4 -     25040 G--T----T-T
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          2851 4 +      3528 G--T----T-T
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  49218 4 +     51589 G--T----T-T
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       12394 4 +     14732 G--T----T-T
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       2871 4 -     28054 G--T----T-T
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44657666 4 -  44834318 G--T----T-T
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        2675 4 +      3372 G--T----T-T
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   3844 2 +     90398 --------T-T
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16079946 4 +  31416278 G--C----T-T
i Trichechus_manatus.JH594618.1                         I 1 C 0
s Tupaia_chinensis.KB320831.1                             2790586 3 -   3938065 G--T----T--
i Tupaia_chinensis.KB320831.1                           I 1 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    3110 3 +     13056 C--T----T--
i Tupaia_tana.TupTan_flattened_line_68454               I 1 C 0
s Tursiops_truncatus.MRVK01000923.1                      69312071 2 -  96451834 --------t-t
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 25194 2 -     25548 --------T-A
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6512829 2 +  28682327 --------T-T
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  3439 5 -     20643 T--T----TTT
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             22983 5 -     33872 T--T----TTT
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1523301 2 -   2331223 --------T-T
i Vicugna_pacos.KN269600.1                              I 2 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                135769 2 -    281493 --------T-T
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       125214 6 -    134049 T--T--GTT-T
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        212299 2 -    227762 --------T-T
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     13449 3 -     20485 ---C----T-G
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           5568 2 -      8775 --------T-T
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Sorex_araneus.JH798170.1                               17748817 583 -  27805282 I
e Chaetophractus_vellerosus.ChaVel_scaffold_2711798           301 1 -       616 I
e Tolypeutes_matacus.TolMat_scaffold_269431                  2793 1 +      6782 I
e Mesoplodon_bidens.MesBid_scaffold_183284                   2166 255 +      2166 T
e Dasypus_novemcinctus.JH568778.1                          180841 1 -   6883506 I
e Carollia_perspicillata.CarPer_scaffold_4436               58128 0 +     67245 C
e Artibeus_jamaicensis.ArtJam_scaffold_41619                 7332 0 -     29036 C
e Macaca_tonkeana.k141_2870633                               2864 158 -     27140 T
e Macaca_nigra.k141_282495                                   2859 158 -     46448 T
e Macaca_maura.k141_251854                                  43912 158 -     79256 T
e Ctenodactylus_gundi.CteGun_scaffold_447                  206336 0 -    956709 C

a score=0.000000
s hg38.chr4_GL000008v2_random                                9928 5 +    209709 T--CAAA
s Acinonyx_jubatus.LLWD01000356.1                         2032001 5 +   3721120 T--TATA
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    110677 5 -    189883 T--AATG
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10655346 5 +  23371972 T--TATA
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7092271 5 -  16596857 T--TATA
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   10997 5 -     22067 G--GATA
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_3103707                  60945 5 +     61638 T--CAAA
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        52753 5 +     53391 T--CAAA
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         3478 5 +     72529 T--CAAA
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          3053 5 +      3797 T--CAAA
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             8227 5 -     18050 T--CATA
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  9340 5 -     11521 T--CATA
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              8904 5 -     21359 T--CATA
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_298055                                  195 5 +      1823 T--CATA
i Alouatta_juara.k141_298055                            C 0 C 0
s Alouatta_macconnelli.k141_1331706                          8195 5 -     10438 T--CATA
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            4851 5 +      7047 T--CATA
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             8137 5 +     10410 T--CATA
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            1940 5 -      4927 T--CATA
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             4870 5 +      6429 T--CATA
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3518789 5 +   4113121 T--CAGA
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      388934 5 -    631301 T--TGTA
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            29370 5 +     33004 T--TAGA
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 60588 5 +     78111 T--CATA
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            3529 5 +     22701 T--CATA
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5747486 5 +   9889416 t--ctta
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             4071 5 -    104377 T--CATA
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               4077 5 +     23246 T--CATA
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     2081 5 +      5067 T--CATA
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      16018 5 +     17483 T--CATA
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 7332 5 -     29036 T--TGTA
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9537321 5 +  39197703 T--CATA
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             58605 5 +     85812 T--CATA
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 9604 5 +     89302 T--CATA
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             14109 5 -     58268 T--CATA
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             62100 5 +    119057 T--CATA
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               4069 5 -     25888 T--CATA
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 4819 5 -     16375 T--TATA
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              1139 5 +      2719 T--TATA
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26378790 5 +  51448160 t--tata
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        4022 5 -     13118 t--tata
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   41856 5 -     72089 T--TAGA
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6557882 5 +   6870073 T--TAGA
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138138121 5 - 161108492 t--taga
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     570495 5 -    998990 t--taga
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136293854 5 - 158972876 t--taga
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1229610 5 -   1914593 t--taga
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               111962 5 -    171031 T--CATA
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 10988 5 +    125063 T--CATA
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                13036 5 -    216513 T--CATA
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        5576 5 -    134917 T--CATA
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3218194 5 -   8989139 T--TAGA
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           395899 5 -  15254737 T--TAGA
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2971632 5 +   6889770 T--TAGA
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11516725 5 +  39901454 T--TATA
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   11743 5 +     87036 T--TATA
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11263386 5 -  35597290 t--tata
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11085915 5 +  39895921 t--tata
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16452939 5 -  44759192 t--tata
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21323865 5 + 157394656 T--CAGA
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135705092 5 - 157403528 T--CAGA
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_979108                   176 5 -      1248 A--CATA
i Capromys_pilorides.CapPil_scaffold_979108             C 0 C 0
s Carlito_syrichta.NW_007248099.1                          307176 5 +    345090 C--TATA
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               58128 5 +     67245 T--TATA
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   28620 5 +     33760 T--TATC
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   157411 5 -    276539 T--TATA
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15784780 3 -  24422027 a--a--a
i Cavia_aperea.AVPZ01000278.1                           I 1 C 0
s Cavia_porcellus.DS562889.1                             15796712 5 -  24440124 a--aaaa
i Cavia_porcellus.DS562889.1                            I 1 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       174903 5 +    436027 A--AAAA
i Cavia_tschudii.CavTsc_scaffold_488                    I 1 C 0
s Cebus_albifrons.Contig22                               18888815 5 -  29618158 T--CGTA
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 6359 5 -     26817 T--CATA
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                10599 5 +     25043 T--CATA
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         6209 5 +     21754 C--TATA
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4362506 5 +   7569818 t--tata
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         2258 5 -      9338 T--TATA
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6552737 5 +   6739814 T--CAAA
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      54214 5 -     54931 T--CAAA
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         19198 5 -     19697 T--CAAA
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         56729 5 -    107033 T--CAAA
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        3169 5 -      3853 T--CAAA
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          27105 5 +     30494 T--CAAA
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           3129 5 -      4022 T--CAAA
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          3023 5 -      3505 T--CAAA
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           21811 5 +     35983 T--CAAA
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11988348 5 +  12117833 T--CAAA
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46475101 5 +  46592721 T--CAAA
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      32930 5 +     33420 T--CAAA
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        2964 5 -      3443 T--CAAA
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      3957 5 -      4669 T--CAAA
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        3750 5 -      4411 T--CAAA
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         3280 5 -      4205 T--CAAA
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_2711798           302 5 -       616 C--TAGA
i Chaetophractus_vellerosus.ChaVel_scaffold_2711798     I 1 C 0
s Cheirogaleus_major.k141_1157592                           57124 4 -     68416 ---CATA
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            6166 4 +     13308 ---TATA
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             3624 5 -     18223 T--CATA
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             20647 5 +     25473 T--CATA
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           39686 5 +     57117 T--CATA
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          44361 5 +     54541 T--CATA
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15959945 5 +  43084221 a--atcg
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         69184 5 +    196370 T--CATA
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          13364 5 +     40510 T--CATA
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15136564 5 -  15256731 T--CAAA
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      31610 5 -     53260 T--CAAA
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101142059 5 + 101219884 t--caaa
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                15087 5 -     21363 T--TAGA
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           760398 5 +    964067 T--TAGA
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_141308              7100 5 -     12508 T--GACA
i Chrysochloris_asiatica.ChrAsi_scaffold_141308         C 0 I 1700
s Colobus_angolensis.KN985967.1                          10880638 5 +  10971483 T--CAAA
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147661796 4 + 156195979 T---AAA
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            13783 5 +     23629 T--CAAA
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60611245 5 +  78930452 t--tttt
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         38221 4 -     40477 t--a-ta
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 276570 5 -    399297 T--AATA
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53027194 5 +  72327488 t--aata
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             18315 5 -     19186 T--TTTA
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            50016 5 -     70449 T--TATA
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 28714 5 -     67205 A--CATA
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                15936 5 +     26546 A--AATA
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             57035 5 -    236241 A--AATA
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          180842 5 -   6883506 C--TAGA
i Dasypus_novemcinctus.JH568778.1                       I 1 C 0
s Daubentonia_madagascariensis.ctg11                     16842980 5 +  31942871 T--TATA
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80035476 5 -  96802777 t--tata
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18697438 5 -  18957592 t--tgta
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 321153 5 +    993696 t--tata
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   1805 5 +    151128 T--TATA
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   155828 5 +    228994 A--ATAA
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3653542 5 +   4240102 t--tata
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 25106 5 +     28912 T--TATA
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                34297 4 -     73477 ---AATA
i Dolichotis_patagonum.DolPat_scaffold_14102            I 1 C 0
s Echinops_telfairi.JH980316.1                           22993193 5 -  44670279 T--GAAA
i Echinops_telfairi.JH980316.1                          C 0 I 301
s Eidolon_helvum.KE772537.1                                 10818 4 +     24177 t--t-ta
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1490138 5 +   1727528 T--TAGA
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7804888 5 +  15467074 T--GACA
i Elephantulus_edwardii.JH947210.1                      C 0 I 281
s Ellobius_lutescens.LOEQ01003611.1                        237848 5 -    369425 t--aata
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           4864 5 -      7838 t--aata
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85869799 5 +  99434291 T--TGTA
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4702395 5 +   6522550 t--tata
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5851576 5 -   7175178 t--tata
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13350079 5 +  41866177 t--tata
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          11569 5 +     92910 t--tata
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11531112 4 +  16010500 ---TGCA
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48768742 5 -  48907691 T--CAAA
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          313677 5 +    330699 T--TATA
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             60129 5 +     89355 T--TATA
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              3170 5 +     13586 T--TATA
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               3105 5 -      6809 T--TATA
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             9580 5 +     36558 T--TATA
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             5895 6 +     60246 TT-TATA
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 9378 5 +    109717 T--TATA
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               13757 6 +     16540 TT-TATA
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                14033 5 +     27497 T--TATA
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           16499 5 +     26808 T--TATA
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                31223 5 +     46535 T--TATA
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              13946 5 -     29447 T--TATA
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129890977 5 - 159252932 T--TATA
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129278049 5 - 158578461 T--TATA
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 19184 5 +     52776 T--TATA
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13890892 2 -  19261668 a-----a
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     209081 5 -    847004 T--TATA
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           11462 5 -     43889 T--TATA
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           8528 5 +     27357 T--TATA
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               154436 5 +    324696 T--TATA
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    179938 5 -    189561 t--taga
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           10847 6 -     18683 TT-TATA
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               3326 5 -     14630 T--CAAA
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119650425 5 - 195582420 t--caaa
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   75587 6 +    118900 TT-ATAA
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                         3730 5 +      3980 T--TATA
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             26206 5 +     26611 T--TATA
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             3666 5 +     56096 T--TATA
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        26943 5 -     42470 T--TATA
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        43537 5 -     54384 T--TATA
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              15224 5 +     53719 T--TATA
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                26137 5 -     91191 T--TAGA
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2549278 5 +  31725842 a--aata
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               54704 5 +     73687 T--GACA
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 I 987
s Hippopotamus_amphibius.HipAmp_scaffold_1308              145706 5 +    277961 T--TATA
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      277022 4 -    477199 t--a-ta
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              6182 4 -      9143 T--A-TA
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      2583 5 -   7690867 T--CAAA
i Hoolock_leuconedys.ctg79                                 I 4 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 14324 5 -     67322 T--TATA
i Hyaena_hyaena.HyaHya_flattened_line_20729             I 45 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           17199 5 -    119109 A--AATA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       I 1 C 0
s Hylobates_abbotti.k141_493872                              3147 5 +      5897 T--CAAA
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_1485652                              1567 5 -      1697 T--CAAA
i Hylobates_agilis.k141_1485652                         C 0 C 0
s Hylobates_klossii.k141_466549                              9591 5 +     11537 T--CAAA
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14622692 5 -  25970782 T--CAAA
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1133650                            2582 5 -      2775 T--CAAA
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             32079 5 -     60944 T--CAAA
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     4325 5 +     22540 A--AACA
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7124213 5 +  13083262 t--tata
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_1884019                                   1411 5 -      2196 T--TATA
i Indri_indri.k141_1884019                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               7464 5 +     17520 T--TATA
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8563736 5 +  11848649 G--GATA
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               22289 5 +     37189 T--TATA
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          48190 5 -    147782 T--TATA
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   112188 5 -    115756 T--TATA
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258405226 5 - 285822530 T--TATA
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        22095 5 +     39228 T--TATA
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            51470 5 +     63517 T--TATA
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        76714 5 +    116806 T--TATA
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     29734 5 -     33031 T--TATA
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3084019 5 -   3498232 T--TATA
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    11202 4 +     22452 T--TA-A
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            134624 5 +   3060487 t--tata
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19245825 5 +  19376315 T--CAAA
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            8826 5 +     84689 C--TGTA
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3776577 5 +   6799190 C--TGTA
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20589500 5 -  62548349 T--GACA
i Loxodonta_africana.GL010040.1                         C 0 I 837
s Lycaon_pictus.CM007556.1                               11085371 5 +  39895028 t--tata
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             17509 5 +     74745 T--CGAA
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12704015 5 +  12821369 T--CAAA
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               6111 5 +      6569 T--CAAA
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           44413 5 +     63263 T--CAAA
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_925451                                  421 5 +     10231 T--CAAA
i Macaca_fuscata.k119_925451                            C 0 C 0
s Macaca_leonina.k141_3421209                                2562 5 +      3017 T--CAAA
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_mulatta.NC_041755.1                            196033092 5 + 196197964 T--CAAA
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11443198 5 +  11645122 T--CAAA
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_radiata.k141_1580474                                2954 5 -      3617 T--CAAA
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 13284 5 -     55006 T--CAAA
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43838321 5 +  43892939 T--CAAA
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                5543 5 -      5978 T--CAAA
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                700234 4 +    802869 T--T-TA
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43434987 5 -  43563597 T--CAAA
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4447813 5 -   4543643 T--CAAA
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            144726 5 +    252755 T--TATA
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             34801 5 +     58827 T--TATA
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36872048 5 +  64221397 t--tata
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       62894 4 -    234502 T--A-TA
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_146202             609 5 -      1999 T--TGTA
i Mellivora_capensis.MelCap_flattened_line_146202       C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               10149 5 +     15977 T--AATA
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1044933 5 -  26018355 a--aata
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Microcebus_murinus.CM007691.1                          16508345 5 +  47401472 t--tata
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  29619 5 -     48017 T--GAGA
i Microgale_talazaci.MicTal_scaffold_34660              C 0 I 300
s Micronycteris_hirsuta.MicHir_scaffold_37978               21313 5 -     32043 T--TGTA
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22818051 5 -  98408828 t--aata
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8208062 5 +  10048721 t--tata
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            32734 5 +     45743 T--TATA
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        33642 5 +     34273 T--CAAA
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         9325 5 -    104932 T--TATA
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     3745 5 +      8497 T--TATA
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 145059 5 +    154973 T--TATA
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                159819 5 +    265003 T--TGTA
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 3240 5 -      4346 T--TAGA
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  142915 5 -    168139 T--TATA
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          17700 5 -    100666 A--TGTA
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70764538 5 +  92629107 t--aata
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75487580 5 +  98207768 t--aata
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67553775 5 +  89017189 t--aata
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74328762 5 +  97876770 c--aata
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              9328 5 +     98495 G--CAGA
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4422181 5 -  28371801 T--TGTA
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     88244 5 -    117718 A--CATA
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               966024 5 +   8389877 t--tata
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5017714 5 +   6462685 t--tata
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3463611 5 -   3747815 t--tata
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         8805 5 +     66751 T--TATA
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3685 5 -      8794 T--TCAA
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            108661 5 +    362372 T--AATA
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               6021 5 +     48152 T--CAGA
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4482919 5 -  14209539 T--TATA
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3949672 5 -   4490290 t--tata
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  47926 5 +     94413 T--TGTA
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1439838                            894 5 +      3718 T--CAAA
i Nomascus_annamensis.k141_1439838                      I 36 I 134
s Nomascus_concolor.k141_49591                               1117 5 +      2014 T--CAAA
i Nomascus_concolor.k141_49591                          C 0 C 0
s Nomascus_gabriellae.k141_642452                              42 5 +      2851 T--CAAA
i Nomascus_gabriellae.k141_642452                       T 438 C 0
s Nomascus_siki_b.tarseq_80                             22921 5 -  18771707 T--CAAA
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                   670 5 +      4512 T--CAAA
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                28364 5 +   3668941 t--tata
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65565465 5 -  95554990 C--TGTA
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            2193 5 +      6470 C--TGTA
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65667813 5 +  89412551 C--TGTA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4994181 5 -  23139505 G--CATC
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3683735 5 +  10294119 a--gata
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             677566 5 -   3126709 T--TATA
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1078368 5 +   1425656 T--TAGA
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         35663 5 +     78940 t--taga
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  123324 5 +    145789 T--AATA
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  35080 5 +     62360 T--AATA
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7223356 5 -   7562323 t--taca
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              41741 5 -     66828 T--TACA
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 I 316
s Oryctolagus_cuniculus.CM000803.1                      141873860 5 + 163896628 t--taaa
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      305702 5 -    505867 t--tata
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       37171 5 +     38679 T--TATA
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18006613 5 -  38779656 T--TATA
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134075930 5 - 275406953 T--TAGA
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      77144 5 +    140051 T--TAGA
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127572670 5 - 205426864 t--caaa
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120149823 5 - 196562556 t--caaa
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  32379 5 +    295523 T--TATA
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3636113 5 +  18214204 T--TATA
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5025760 5 -   6340057 T--TATA
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1064791 5 -   1292953 t--taga
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188153769 5 - 188283584 T--CAAA
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            49981 5 +     76494 T--CAAA
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47511166 5 +  47705337 T--CAAA
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 65143 5 -    104429 T--CAAA
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  14934 5 -     29451 T--CAAA
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                35337 5 +     35859 T--CAAA
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113676 5 -    135482 T--TATA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           3219 5 -     23713 T--TATA
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            22517 5 -     27972 T--TATA
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      41086 5 -     45160 T--TATA
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4948260 5 -   8017169 t--aata
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    10429 5 -     36578 A--AATA
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            119973 5 -    122454 T--TATA
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           3027 5 -      3310 T--CAAA
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       22932 5 -     82327 T--CAAA
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           19679 5 +     19957 T--CAAA
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26737693 5 +  26888534 T--CAAA
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            95471 5 +    112873 T--TTTA
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             41671 5 -     61926 T--CATA
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        23100 5 +     78826 T--CATA
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              7051 5 -     15800 T--CATA
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        10249 5 -     16101 T--CATA
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          3558 5 +      9673 T--CATA
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13472552 5 -  19735023 T--CATA
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           11460 5 -     31692 T--CATA
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           4039 5 +     21690 T--TACA
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       20896 5 +     44506 T--CATA
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        21106 5 +     67491 T--CATA
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      11347 5 -     98129 T--CATA
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     20952 5 +    147771 T--CATA
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        21202 4 -     23762 ---CATA
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          1668 5 -     55515 T--CATA
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         21021 5 +    152463 T--CATA
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      7781 5 +      8943 T--CATA
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                         10741 5 +    134592 T--CATA
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          21331 5 -     75465 T--CATA
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              185218 5 -    373494 t--caaa
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19805126 5 +  19899266 T--CAAA
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               3261 5 -     15069 T--CAAA
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              3395 5 +     14865 T--CAAA
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                74571 5 +     78963 T--GACA
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 I 991
s Prolemur_simus.MPIZ01000048.1                           6846602 5 +  12164890 t--tata
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    665220 5 -   2312742 N--NNNN
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         1745 5 +     11805 T--TATA
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           41080 5 +     52369 T--TATA
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         33469 5 -     44753 T--TATA
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            15390 5 +     27322 T--TATA
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       15029 5 -     53241 T--TATA
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         37300 5 -     48185 T--TATA
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           31689 5 +     77221 t--aata
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            2488 5 -     27784 T--TATA
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        244275 5 -    344369 T--TGTA
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13244619 4 -  17261082 t--t-ta
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             602569 4 -   3946241 t--t-ta
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131532342 5 - 161321710 T--TATA
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             27390 5 +     56732 T--CAAA
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6803881 5 +   6970761 T--CAAA
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             3274 5 +     18040 T--CAAA
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                14445 5 +     68503 T--TAGA
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13913634 5 +  90463843 T--AATG
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1786433 4 +   2252614 T--a-ta
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           13827 5 -     14454 T--CAAA
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206375153 5 - 206558726 T--CAAA
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44854053 5 -  45163003 T--CAAA
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                17909 4 +    109198 T--T-TA
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       6247 5 +     12214 T--TAGA
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15670774 5 -  43202129 t--cata
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        2640 5 +     34089 T--CATA
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              2581 5 -     60842 T--CATA
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              2676 5 +     67014 T--CATA
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              2654 5 +     60816 T--CATA
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 2591 5 -     76454 T--CATA
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17339343 5 -  30362882 T--CATA
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         18718 5 -     62485 T--CATA
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   29996 5 -    114521 T--TTTT
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1527475                       25813 5 +     26421 T--CAAA
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       6273 5 +     20762 T--CAAA
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         40008 5 +     40653 T--CAAA
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                           10565 5 -     12194 T--CAAA
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     23987 5 -     27512 T--CAAA
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         33006 5 -     33692 T--CAAA
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   97856 5 -    120886 T--AATA
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            16631 5 +    739146 T--TATA
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2238129 5 +   2842873 t--tata
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             233027 5 -    276980 T--TATA
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            25581 5 +     62062 T--TATA
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189270498 5 + 218635234 T--TATA
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        12949 5 -  13920577 T--CAAA
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               4434 5 -      6213 T--TATA
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               13361 5 +     45698 T--TAGA
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      805358 5 +   1148477 T--TATA
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  56018 5 +     99546 T--TATA
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               24659 5 +     42269 C--TATA
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               57975 5 +     65473 C--TATA
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194005305 5 - 194193292 T--CAAA
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             37490 5 -     47444 A--ACTA
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  2794 5 +      6782 C--TAGA
i Tolypeutes_matacus.TolMat_scaffold_269431             I 1 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  134497 5 -    259118 T--TGTA
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        24383 5 +     38948 T--CAAA
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   18110 5 -     32910 T--CAAA
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       24008 5 +     24652 T--CAAA
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      2886 5 -      3559 T--CAAA
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           40830 5 -     54611 T--CAAA
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       16831 5 +     17312 T--CAAA
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    24194 5 -     25040 T--CAAA
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          2855 5 +      3528 T--CAAA
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  49222 5 +     51589 T--CAAA
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       12398 5 +     14732 T--CAAA
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       2875 5 -     28054 T--CAAA
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44657670 5 -  44834318 T--CAAA
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        2679 5 +      3372 T--CAAA
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   3846 5 +     90398 T--TATA
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16079950 5 +  31416278 T--GACA
i Trichechus_manatus.JH594618.1                         C 0 I 833
s Tupaia_chinensis.KB320831.1                             2790589 4 -   3938065 ---TATA
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    3113 4 +     13056 ---TATA
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69312073 5 -  96451834 t--tata
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 25196 5 -     25548 T--TTTA
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6512831 5 +  28682327 T--TATA
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  3444 7 -     20643 TTTTATA
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             22988 5 -     33872 T--TATA
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1523303 5 -   2331223 T--TAGA
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                135771 5 -    281493 T--TATA
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       125220 5 -    134049 T--TATA
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        212301 5 -    227762 T--TATA
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     13452 5 -     20485 T--GATA
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           5570 5 -      8775 T--TATA
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Sorex_araneus.JH798170.1                               17748817 583 -  27805282 I
e Mesoplodon_bidens.MesBid_scaffold_183284                   2166 255 +      2166 T
e Macaca_tonkeana.k141_2870633                               2864 158 -     27140 T
e Macaca_nigra.k141_282495                                   2859 158 -     46448 T
e Macaca_maura.k141_251854                                  43912 158 -     79256 T
e Ctenodactylus_gundi.CteGun_scaffold_447                  206336 0 -    956709 C

a score=0.000000
s hg38.chr4_GL000008v2_random                                9933  4 +    209709 AC-A---------------A
s Acinonyx_jubatus.LLWD01000356.1                         2032006  4 +   3721120 GC-A---------------A
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    110682  4 -    189883 AA-A---------------G
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10655351  4 +  23371972 CC-A---------------A
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7092276  4 -  16596857 AC-A---------------A
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allenopithecus_nigroviridis.k141_3103707                  60950  4 +     61638 AC-A---------------A
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        52758  4 +     53391 AC-A---------------A
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         3483  4 +     72529 AC-A---------------A
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          3058  4 +      3797 AC-A---------------A
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             8232  4 -     18050 AC-A---------------A
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  9345  4 -     11521 AC-A---------------A
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              8909  4 -     21359 AC-A---------------A
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_298055                                  200  4 +      1823 AC-A---------------A
i Alouatta_juara.k141_298055                            C 0 C 0
s Alouatta_macconnelli.k141_1331706                          8200  4 -     10438 AC-A---------------A
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            4856  4 +      7047 AC-A---------------A
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             8142  4 +     10410 AC-A---------------A
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            1945  4 -      4927 AC-A---------------A
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             4875  4 +      6429 AC-A---------------A
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3518794  4 +   4113121 AC-A---------------G
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      388939  4 -    631301 AT-A---------------A
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            29375  4 +     33004 AC-A---------------G
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 60593  4 +     78111 AA-A---------------A
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            3534  4 +     22701 AA-A---------------A
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5747491  4 +   9889416 aa-a---------------a
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             4076  4 -    104377 AA-A---------------A
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               4082  4 +     23246 AA-A---------------A
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     2086  4 +      5067 AA-A---------------A
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      16023  4 +     17483 AC-A---------------A
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 7337  4 -     29036 AC-A---------------A
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9537326  4 +  39197703 AC-A---------------A
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             58610  4 +     85812 AC-A---------------A
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 9609  4 +     89302 AC-A---------------A
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             14114  4 -     58268 AC-A---------------A
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             62105  4 +    119057 AC-A---------------A
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               4074  4 -     25888 AC-A---------------A
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 4824  4 -     16375 AA-A---------------A
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              1144  4 +      2719 AA-A---------------A
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26378795  4 +  51448160 ac-a---------------g
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        4027  4 -     13118 ac-a---------------g
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   41861  4 -     72089 AC-A---------------G
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6557887  4 +   6870073 AC-A---------------A
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138138126  4 - 161108492 AC-A---------------A
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     570500  4 -    998990 AC-A---------------A
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136293859  4 - 158972876 AC-A---------------A
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1229615  4 -   1914593 AC-A---------------A
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               111967  4 -    171031 AC-A---------------A
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 10993  4 +    125063 AC-A---------------A
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                13041  4 -    216513 AC-A---------------A
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        5581  4 -    134917 AC-A---------------A
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3218199  4 -   8989139 AC-A---------------A
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           395904  4 -  15254737 AC-A---------------A
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2971637  4 +   6889770 AC-A---------------A
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11516730  4 +  39901454 AC-A---------------A
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   11748  4 +     87036 AC-A---------------A
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11263391  4 -  35597290 aC-A---------------A
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11085920  4 +  39895921 aC-A---------------A
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16452944  4 -  44759192 aC-A---------------A
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21323870  4 + 157394656 GC-A---------------G
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135705097  4 - 157403528 GC-A---------------G
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_979108                   181  4 -      1248 AA-A---------------T
i Capromys_pilorides.CapPil_scaffold_979108             C 0 I 29
s Carlito_syrichta.NW_007248099.1                          307181  4 +    345090 AC-A---------------A
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               58133  4 +     67245 AT-A---------------A
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   28625  4 +     33760 AA-A---------------A
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   157416  4 -    276539 AC-A---------------A
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15784783  4 -  24422027 ga-a---------------t
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15796717  4 -  24440124 ga-a---------------t
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       174908  4 +    436027 GA-A---------------T
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18888820  4 -  29618158 AC-A---------------G
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 6364  4 -     26817 AC-A---------------A
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                10604  4 +     25043 AC-A---------------A
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         6214  4 +     21754 AC-A---------------A
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4362511  4 +   7569818 ac-t---------------a
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         2263  4 -      9338 AC-T---------------A
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6552742  4 +   6739814 AC-A---------------A
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      54219  4 -     54931 AC-A---------------A
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         19203  4 -     19697 AC-A---------------A
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         56734  4 -    107033 AC-A---------------A
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        3174  4 -      3853 AC-A---------------A
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          27110  4 +     30494 AC-A---------------A
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           3134  4 -      4022 AC-A---------------A
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          3028  4 -      3505 AC-A---------------A
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           21816  4 +     35983 AC-A---------------A
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11988353  4 +  12117833 AC-A---------------A
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46475106  4 +  46592721 AC-A---------------A
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      32935  4 +     33420 AC-A---------------A
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        2969  4 -      3443 AC-A---------------A
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      3962  4 -      4669 AC-A---------------A
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        3755  4 -      4411 AC-A---------------A
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         3285  4 -      4205 AC-A---------------A
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_2711798           307  3 -       616 AC-T----------------
i Chaetophractus_vellerosus.ChaVel_scaffold_2711798     C 0 C 0
s Cheirogaleus_major.k141_1157592                           57128  4 -     68416 AC-G---------------A
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            6170  4 +     13308 AC-A---------------A
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             3629  4 -     18223 AC-A---------------G
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             20652  4 +     25473 AC-A---------------G
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           39691  4 +     57117 AC-A---------------G
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          44366  4 +     54541 AC-A---------------G
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15959950  3 +  43084221 aA-A----------------
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         69189  4 +    196370 AC-A---------------A
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          13369  4 +     40510 AC-A---------------A
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15136569  4 -  15256731 AC-A---------------A
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      31615  4 -     53260 AC-A---------------A
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101142064  4 + 101219884 ac-a---------------a
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                15092  4 -     21363 AC-A---------------A
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           760403  4 +    964067 AC-A---------------A
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10880643  4 +  10971483 AC-A---------------A
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147661800  4 + 156195979 AC-A---------------A
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            13788  4 +     23629 AC-A---------------A
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60611250 17 +  78930452 at-tccataagTACA-AG-C
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         38225 17 -     40477 aa-A-ACAAAAGAGAGAG-A
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 I 2
s Cricetomys_gambianus.CriGam_scaffold_949                 276575  4 -    399297 AA-A---------------A
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53027199  4 +  72327488 aa-a---------------g
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             18320  4 -     19186 AT-G---------------G
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            50021  4 -     70449 AC-A---------------A
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  206336  3 -    956709 -A-T---------------A
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 28719  4 -     67205 AA-A---------------T
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                15941  4 +     26546 AA-A---------------T
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             57040  4 -    236241 AA-A---------------T
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          180847  5 -   6883506 AC-A-------T-------C
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16842985  4 +  31942871 AC-A---------------A
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80035481  4 -  96802777 ac-a---------------g
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18697443  4 -  18957592 aC-A---------------A
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 321158  4 +    993696 ac-t---------------a
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   1810  4 +    151128 AC-T---------------A
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   155833  3 +    228994 AA-A----------------
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3653547  4 +   4240102 aa-t---------------a
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 25111  4 +     28912 AA-T---------------A
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                34301  4 -     73477 AA-A---------------T
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22993499  4 -  44670279 GC-A---------------A
i Echinops_telfairi.JH980316.1                          I 301 I 3
s Eidolon_helvum.KE772537.1                                 10822  4 +     24177 ac-a---------------a
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1490143  4 +   1727528 AC-A---------------G
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7805174  4 +  15467074 ac-a---------------a
i Elephantulus_edwardii.JH947210.1                      I 281 I 190
s Ellobius_lutescens.LOEQ01003611.1                        237853  4 -    369425 aa-a---------------a
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           4869  4 -      7838 aa-a---------------a
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85869804  4 +  99434291 AC-A---------------A
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4702400  4 +   6522550 acaa----------------
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5851581  4 -   7175178 ac-a---------------a
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13350084  4 +  41866177 ac-a---------------a
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          11574  4 +     92910 ac-a---------------a
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11531116  4 +  16010500 GT-G---------------A
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48768747  4 -  48907691 AC-A---------------A
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          313682  4 +    330699 AC-A---------------G
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             60134  4 +     89355 AC-A---------------G
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              3175  4 +     13586 AC-A---------------A
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               3110  4 -      6809 AC-A---------------A
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             9585  4 +     36558 AC-A---------------A
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             5901  4 +     60246 AC-A---------------A
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 9383  4 +    109717 AC-A---------------A
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               13763  4 +     16540 AC-A---------------A
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                14038  4 +     27497 AA-A---------------A
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           16504  4 +     26808 AC-A---------------A
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                31228  4 +     46535 AC-A---------------A
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              13951  4 -     29447 AC-A---------------A
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129890982  4 - 159252932 GC-A---------------A
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129278054  4 - 158578461 GC-A---------------A
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 19189  4 +     52776 GC-A---------------A
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13890894  4 -  19261668 aa-a---------------a
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     209086  2 -    847004 AC------------------
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           11467  2 -     43889 AC------------------
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           8533  2 +     27357 AC------------------
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               154441  4 +    324696 AG-A---------------A
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    179943  4 -    189561 aC-A---------------G
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           10853  4 -     18683 AA-A---------------A
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               3331  4 -     14630 AC-A---------------A
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119650430  4 - 195582420 ac-a---------------a
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   75593  4 +    118900 AG-A---------------A
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                         3735  4 +      3980 AC-A---------------A
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             26211  4 +     26611 AC-A---------------A
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             3671  4 +     56096 AC-A---------------A
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        26948  4 -     42470 AC-A---------------A
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        43542  4 -     54384 AC-A---------------A
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              15229  4 +     53719 AC-A---------------A
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                26142  4 -     91191 AC-A---------------G
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2549283  4 +  31725842 aa-a---------------a
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               55696  4 +     73687 AC-G---------------A
i Heterohyrax_brucei.HetBruBak_scaffold_25354           I 987 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              145711  4 +    277961 AC-A---------------A
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      277026  5 -    477199 aa-a--a------------a
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              6186  4 -      9143 AA-A---------------A
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      2588  4 -   7690867 AC-A---------------A
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           17204  4 -    119109 AA-A---------------T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              3152  4 +      5897 AC-A---------------A
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_1485652                              1572  4 -      1697 AC-A---------------A
i Hylobates_agilis.k141_1485652                         C 0 C 0
s Hylobates_klossii.k141_466549                              9596  4 +     11537 AC-A---------------A
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14622697  4 -  25970782 AC-A---------------A
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1133650                            2587  4 -      2775 AC-A---------------A
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             32084  4 -     60944 AC-A---------------A
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     4330  4 +     22540 AA-A---------------A
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7124218  4 +  13083262 GA-A---------------A
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_1884019                                   1416  4 -      2196 AA-A---------------A
i Indri_indri.k141_1884019                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               7469  4 +     17520 AC-A---------------G
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8563741  4 +  11848649 CA-A---------------G
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               22294  4 +     37189 AC-A---------------G
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          48195  4 -    147782 AC-A---------------A
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   112193  4 -    115756 ACAA----------------
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258405231  4 - 285822530 AC-A---------------A
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        22100  4 +     39228 AC-A---------------A
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            51475  4 +     63517 AC-A---------------A
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        76719  4 +    116806 AC-A---------------A
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     29739  4 -     33031 AC-A---------------A
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3084024  1 -   3498232 -------------------A
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    11206  4 +     22452 AT-A---------------A
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            134629  4 +   3060487 ac-a---------------g
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19245830  4 +  19376315 AC-A---------------A
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            8831  4 +     84689 AC-A---------------A
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3776582  4 +   6799190 AC-A---------------A
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20590342  4 -  62548349 AC-G---------------A
i Loxodonta_africana.GL010040.1                         I 837 C 0
s Lycaon_pictus.CM007556.1                               11085376  4 +  39895028 aC-A---------------A
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             17514  4 +     74745 AC-A---------------A
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12704020  4 +  12821369 AC-A---------------A
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               6116  4 +      6569 AC-A---------------A
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           44418  4 +     63263 AC-A---------------A
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_925451                                  426  4 +     10231 AC-A---------------A
i Macaca_fuscata.k119_925451                            C 0 C 0
s Macaca_leonina.k141_3421209                                2567  4 +      3017 AC-A---------------A
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_mulatta.NC_041755.1                            196033097  4 + 196197964 AC-A---------------A
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11443203  4 +  11645122 AC-A---------------A
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_radiata.k141_1580474                                2959  4 -      3617 AC-A---------------A
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 13289  4 -     55006 AC-A---------------A
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43838326  4 +  43892939 AC-A---------------A
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                5548  4 -      5978 AC-A---------------A
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                700238  4 +    802869 AC-A---------------G
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43434992  4 -  43563597 AC-A---------------A
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4447818  4 -   4543643 AC-A---------------A
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            144731  4 +    252755 AC-A---------------A
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             34806  4 +     58827 AC-A---------------A
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36872053  4 +  64221397 GA-A---------------A
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       62898  4 -    234502 AA-A---------------A
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 I 2
s Mellivora_capensis.MelCap_flattened_line_146202             614  4 -      1999 AC-A---------------A
i Mellivora_capensis.MelCap_flattened_line_146202       C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               10154  4 +     15977 AC-A---------------A
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1044938  4 -  26018355 aa-a---------------a
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Microcebus_murinus.CM007691.1                          16508350  4 +  47401472 at-a---------------a
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  29924  4 -     48017 GC-A---------------A
i Microgale_talazaci.MicTal_scaffold_34660              I 300 I 3
s Micronycteris_hirsuta.MicHir_scaffold_37978               21318  4 -     32043 AC-A---------------A
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22818056  4 -  98408828 aa-a---------------a
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8208067  3 +  10048721 aa-a----------------
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            32739  3 +     45743 AA-A----------------
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        33647  4 +     34273 AC-A---------------A
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         9330  1 -    104932 -------------------A
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     3750  4 +      8497 AT-A---------------A
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 145064  4 +    154973 AC-A---------------G
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                159824  4 +    265003 AC-A---------------A
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 3245  4 -      4346 AC-A---------------G
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  142920  4 -    168139 AC-A---------------A
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          17705  3 -    100666 AC-A----------------
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70764543  4 +  92629107 aa-a---------------a
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75487585  4 +  98207768 aa-a---------------a
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67553780  4 +  89017189 aa-a---------------a
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74328767  4 +  97876770 aa-a---------------a
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              9333  4 +     98495 AA-A---------------A
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4422186  4 -  28371801 AC-A---------------A
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     88249  4 -    117718 AA-A---------------T
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               966029  3 +   8389877 ac-a----------------
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5017719  3 +   6462685 ac-a----------------
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3463616  3 -   3747815 ac-a----------------
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         8810  3 +     66751 AC-A----------------
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3690  4 -      8794 AC-A---------------A
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            108666  4 +    362372 AA-A---------------A
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               6026  4 +     48152 AC-A---------------A
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4482924  1 -  14209539 -------------------A
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3949677  4 -   4490290 ac-a---------------g
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  47931  4 +     94413 AT-A---------------A
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_302224                               1  4 +      1516 AC-A---------------A
i Nomascus_annamensis.k141_302224                       n 134 C 0
s Nomascus_concolor.k141_49591                               1122  4 +      2014 AC-A---------------A
i Nomascus_concolor.k141_49591                          C 0 C 0
s Nomascus_gabriellae.k141_642452                              47  4 +      2851 AC-A---------------A
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             22926  4 -  18771707 AC-A---------------A
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                   675  4 +      4512 AC-A---------------A
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                28369  4 +   3668941 aC-A---------------A
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65565470  4 -  95554990 AC-A---------------A
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            2198  4 +      6470 AC-A---------------A
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65667818  4 +  89412551 AC-A---------------A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4994186  4 -  23139505 AT-A---------------A
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3683740  4 +  10294119 aa-a---------------t
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             677571  4 -   3126709 AC-A---------------A
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1078373  4 +   1425656 AC-A---------------G
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         35668  4 +     78940 aC-A---------------G
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  123329  4 +    145789 AA-A---------------A
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  35085  4 +     62360 AA-A---------------A
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7223361  4 -   7562323 ac-A---------------G
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              42062  4 -     66828 AC-A---------------A
i Orycteropus_afer.OryAfe_flattened_line_13509          I 316 I 217
s Oryctolagus_cuniculus.CM000803.1                      141873865  4 + 163896628 at-a---------------a
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      305707  4 -    505867 aC-A---------------A
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       37176  2 +     38679 AC------------------
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18006618  2 -  38779656 AC------------------
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134075935  4 - 275406953 AC-A---------------G
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      77149  4 +    140051 AC-A---------------G
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127572675  4 - 205426864 ac-a---------------a
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120149828  4 - 196562556 ac-a---------------a
i Pan_troglodytes.CM009241.2                            C 0 I 17
s Panthera_onca.PanOnc_flattened_line_1615                  32384  4 +    295523 GC-A---------------A
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3636118  4 +  18214204 GC-A---------------A
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5025765  4 -   6340057 GC-A---------------A
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1064796  4 -   1292953 aC-A---------------G
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188153774  4 - 188283584 AC-A---------------A
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            49986  4 +     76494 AC-A---------------A
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47511171  4 +  47705337 AC-A---------------A
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 65148  4 -    104429 AC-A---------------A
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  14939  4 -     29451 AC-A---------------A
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                35342  4 +     35859 AC-A---------------A
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113681  4 -    135482 AC-A---------------A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           3224  4 -     23713 AC-A---------------A
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            22522  4 -     27972 AC-A---------------A
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      41091  4 -     45160 AA-T---------------A
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4948265  4 -   8017169 aa-a---------------a
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    10434  4 -     36578 AA-A---------------G
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            119978  4 -    122454 AC-A---------------G
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           3032  4 -      3310 AC-A---------------A
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       22937  4 -     82327 AC-A---------------A
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           19684  4 +     19957 AC-A---------------A
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26737698  4 +  26888534 AC-A---------------A
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            95476  4 +    112873 ACAA----------------
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             41676  4 -     61926 AC-A---------------A
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        23105  4 +     78826 AC-A---------------A
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              7056  4 -     15800 AC-A---------------A
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        10254  4 -     16101 AC-A---------------A
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          3563  4 +      9673 AC-A---------------A
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13472557  4 -  19735023 AC-A---------------A
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           11465  4 -     31692 AC-A---------------A
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           4044  4 +     21690 AC-A---------------G
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       20901  4 +     44506 AC-A---------------A
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        21111  4 +     67491 AC-A---------------A
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      11352  4 -     98129 AC-A---------------A
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     20957  4 +    147771 AC-A---------------A
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        21206  4 -     23762 AC-A---------------A
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          1673  4 -     55515 AC-A---------------A
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         21026  4 +    152463 AC-A---------------A
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      7786  4 +      8943 AC-A---------------A
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                         10746  4 +    134592 AC-A---------------A
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          21336  4 -     75465 AC-A---------------A
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              185223  4 -    373494 ac-a---------------a
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19805131  4 +  19899266 AC-A---------------A
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               3266  4 -     15069 AC-A---------------A
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              3400  4 +     14865 AC-A---------------A
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                75567  4 +     78963 AC-G---------------A
i Procavia_capensis.ProCapCap_scaffold_15315            I 991 C 0
s Prolemur_simus.MPIZ01000048.1                           6846607  4 +  12164890 ac-a---------------a
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    665225  4 -   2312742 NN-N---------------N
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         1750  4 +     11805 AA-A---------------A
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           41085  4 +     52369 AA-A---------------A
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         33474  4 -     44753 AA-A---------------A
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            15395  4 +     27322 AA-A---------------A
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       15034  4 -     53241 AA-A---------------A
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         37305  4 -     48185 AA-A---------------A
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           31694  4 +     77221 ac-a---------------a
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            2493  4 -     27784 AC-A---------------G
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        244280  4 -    344369 AC-A---------------A
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13244623  4 -  17261082 ac-a---------------a
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             602573  4 -   3946241 ac-a---------------a
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131532347  4 - 161321710 GC-A---------------A
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             27395  4 +     56732 AC-A---------------A
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6803886  4 +   6970761 AC-A---------------A
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             3279  4 +     18040 AC-A---------------A
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                14450  4 +     68503 AC-A---------------G
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13913639  4 +  90463843 AA-A---------------A
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1786437  4 +   2252614 aa-a---------------a
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           13832  4 -     14454 AC-A---------------A
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206375158  4 - 206558726 AC-A---------------A
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44854058  4 -  45163003 AC-A---------------A
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                17913  4 +    109198 AC-A---------------A
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       6252  4 +     12214 AC-A---------------G
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15670779  4 -  43202129 AC-A---------------A
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        2645  4 +     34089 AC-A---------------A
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              2586  4 -     60842 AC-A---------------A
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              2681  4 +     67014 AC-A---------------A
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              2659  4 +     60816 AC-A---------------A
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 2596  4 -     76454 AC-A---------------A
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17339348  4 -  30362882 AC-A---------------A
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         18723  4 -     62485 AC-A---------------A
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   30001 17 -    114521 AT-CCCACAGGTACA-CA-A
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1527475                       25818  4 +     26421 AC-A---------------A
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       6278  4 +     20762 AC-A---------------A
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         40013  4 +     40653 AC-A---------------A
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                           10570  4 -     12194 AC-A---------------A
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     23992  4 -     27512 AC-A---------------A
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         33011  4 -     33692 AC-A---------------A
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   97861  4 -    120886 AA-A---------------A
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            16636  4 +    739146 AT-G---------------A
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2238134  4 +   2842873 GA-A---------------A
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             233032  4 -    276980 AC-A---------------A
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            25586  4 +     62062 AC-A---------------A
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189270503  4 + 218635234 AC-A---------------A
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        12954  4 -  13920577 AC-A---------------A
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               4439  4 -      6213 AC-A---------------A
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 I 28
s Tamandua_tetradactyla.TamTet_scaffold_26877               13366  4 +     45698 AA-A---------------C
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      805363  4 +   1148477 AC-A---------------A
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  56023  4 +     99546 AC-A---------------A
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               24664  4 +     42269 AC-A---------------A
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               57980  4 +     65473 AC-A---------------A
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194005310  4 - 194193292 AC-A---------------A
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             37495  4 -     47444 AA-A---------------A
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  2799  5 +      6782 CC-T-------T-------C
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  134502  4 -    259118 AC-A---------------A
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        24388  4 +     38948 AC-A---------------A
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   18115  4 -     32910 AC-A---------------A
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       24013  4 +     24652 AC-A---------------A
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      2891  4 -      3559 AC-A---------------A
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           40835  4 -     54611 AC-A---------------A
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       16836  4 +     17312 AC-A---------------A
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    24199  4 -     25040 AC-A---------------A
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          2860  4 +      3528 AC-A---------------A
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  49227  4 +     51589 AC-A---------------A
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       12403  4 +     14732 AC-A---------------A
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       2880  4 -     28054 AC-A---------------A
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44657675  4 -  44834318 AC-A---------------A
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        2684  4 +      3372 AC-A---------------A
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   3851  3 +     90398 AC-A----------------
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16080788  4 +  31416278 AC-A---------------A
i Trichechus_manatus.JH594618.1                         I 833 C 0
s Tupaia_chinensis.KB320831.1                             2790593  4 -   3938065 AT-A---------------A
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    3117  4 +     13056 AT-C---------------A
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69312078  4 -  96451834 ac-a---------------g
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 25201 11 -     25548 AT-C--------ACATAGAA
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6512836  4 +  28682327 AC-A---------------A
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  3451  4 -     20643 AC-A---------------A
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             22993  4 -     33872 AC-A---------------A
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1523308  4 -   2331223 AC-A---------------A
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                135776  4 -    281493 AC-A---------------A
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       125225  4 -    134049 GA-A---------------A
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        212306  4 -    227762 AC-A---------------A
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     13457  4 -     20485 TA-A---------------A
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           5575  4 -      8775 AC-A---------------G
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Sorex_araneus.JH798170.1                               17748817 583 -  27805282 I
e Chrysochloris_asiatica.ChrAsi_scaffold_141308              7105 1700 -     12508 I
e Mesoplodon_bidens.MesBid_scaffold_183284                   2166 255 +      2166 T
e Hyaena_hyaena.HyaHya_flattened_line_20729                 14329  0 -     67322 C
e Allactaga_bullata.AllBul_scaffold_70162                   11002  0 -     22067 C
e Macaca_tonkeana.k141_2870633                               2864 158 -     27140 T
e Macaca_nigra.k141_282495                                   2859 158 -     46448 T
e Macaca_maura.k141_251854                                  43912 158 -     79256 T

a score=0.000000
s hg38.chr4_GL000008v2_random                                9937 17 +    209709 TA---GA-ACAGAAA-------A-T-T-TCA
s Acinonyx_jubatus.LLWD01000356.1                         2032010 11 +   3721120 TG---GG-GTAGAAA----------------
i Acinonyx_jubatus.LLWD01000356.1                       C 0 I 15
s Acomys_cahirinus.AcoCah_scaffold_1625                    110686 17 -    189883 TA---AA-GCATACA-------A-T-T-CAA
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 I 10
s Ailuropoda_melanoleuca.LNAT01000321.1                  10655355 11 +  23371972 TA---GA-TAAGAAA----------------
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 I 15
s Ailurus_fulgens.LNAC01000003.1                          7092280 11 -  16596857 AA---GA-TCAGAAA----------------
i Ailurus_fulgens.LNAC01000003.1                        C 0 I 15
s Allactaga_bullata.AllBul_scaffold_70162                   11002 11 -     22067 --------------AGTTTCAGA-T-A----
i Allactaga_bullata.AllBul_scaffold_70162               C 0 I 1
s Allenopithecus_nigroviridis.k141_3103707                  60954 17 +     61638 TA---GA-ACAGAAA-------A-T-T-TCA
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        52762 17 +     53391 TA---GA-ACAGAAA-------A-T-T-TCA
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         3487 17 +     72529 TA---GA-ACAGAAA-------A-T-T-TCA
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          3062 17 +      3797 TA---GA-ACAGAAA-------A-T-T-TCA
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             8236 17 -     18050 TA---GA-ACAGAAA-------A-T-T-TCA
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  9349 17 -     11521 TA---GA-ACAGAAA-------A-T-T-TCA
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              8913 17 -     21359 TA---GA-ACAGAAA-------A-T-T-TCA
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_298055                                  204 17 +      1823 TA---GA-ACAGAAA-------A-T-T-TCA
i Alouatta_juara.k141_298055                            C 0 C 0
s Alouatta_macconnelli.k141_1331706                          8204 17 -     10438 TA---GA-ACAGAAA-------A-T-T-TCA
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            4860 17 +      7047 TA---GA-ACAGAAA-------A-T-T-TCA
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             8146 17 +     10410 TA---GA-ACAGAAA-------A-T-T-TCA
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            1949 17 -      4927 TA---GA-ACAGAAA-------A-T-T-TCA
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             4879 17 +      6429 TA---GA-ACAGAAA-------A-T-T-TCA
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3518798 17 +   4113121 TA---GA-GCCGAAA-------T-T-C-TCA
i Ammotragus_lervia.NIVO01013474.1                      C 0 I 11
s Anoura_caudifer.AnoCau_scaffold_422                      388943 17 -    631301 TA---GA-GCAGAAA-------A-T-G-TCA
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 I 11
s Antilocapra_americana.AntAmePen_scaffold_42841            29379 17 +     33004 CA---GA-GCCGAAA-------T-T-T-TCA
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 I 11
s Aotus_azarae.k141_3170768                                 60597 17 +     78111 TA---GA-ACAAAAA-------A-T-T-TCA
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            3538 17 +     22701 TA---GA-ACAAAAA-------A-T-T-TCA
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5747495 17 +   9889416 ta---ga-acaaaaa-------a-t-t-tca
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             4080 17 -    104377 TA---GA-ACAAAAA-------A-T-T-TCA
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               4086 17 +     23246 TA---GA-ACAAAAA-------A-T-T-TCA
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     2090 17 +      5067 AT---GA-GCAGAAA-------A-T-C-TCA
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 I 10
s Arctocebus_calabarensis.k141_1161114                      16027 17 +     17483 CA---GA-GCAGAAA-------A-T-T-TCA
i Arctocebus_calabarensis.k141_1161114                  C 0 I 4
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 7341 17 -     29036 TA---GA-GCAGAAA-------A-T-G-TCA
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 I 11
s Ateles_geoffroyi_b.tarseq_2582                             9537330 17 +  39197703 TA---GA-ACAGAAA-------A-T-T-TCA
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             58614 17 +     85812 TA---GA-ACAGAAA-------A-T-T-TCA
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 9613 17 +     89302 TA---GA-ACAGAAA-------A-T-T-TCA
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             14118 17 -     58268 TA---GA-ACAGAAA-------A-T-T-TCA
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             62109 17 +    119057 TA---GA-ACAGAAA-------A-T-T-TCA
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               4078 17 -     25888 TA---GA-ACAGAAA-------A-T-T-TCA
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 4828 17 -     16375 TA---GA-GAAGAAA-------A-T-T-TAA
i Avahi_laniger.k141_2840928                            C 0 I 4
s Avahi_peyrierasi.k141_2689020                              1148 17 +      2719 TA---GA-GAAGAAA-------A-T-T-TAA
i Avahi_peyrierasi.k141_2689020                         C 0 I 4
s Balaenoptera_acutorostrata.KI537095.1                  26378799 17 +  51448160 ta---gA-GCAGAAA-------A-T-T-TCA
i Balaenoptera_acutorostrata.KI537095.1                 C 0 I 11
s Balaenoptera_bonaerensis.DF502048.1                        4031 17 -     13118 ta---gA-GCAGAAA-------A-T-T-TCA
i Balaenoptera_bonaerensis.DF502048.1                   C 0 I 11
s Beatragus_hunteri.BeaHun_scaffold_21644                   41865 17 -     72089 TA---GA-GCCGAAA-------T-T-C-TCA
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 I 8
s Bison_bison.KN264915.1                                  6557891 17 +   6870073 TA---GA-GCCGAAA-------T-T-T-TCA
i Bison_bison.KN264915.1                                C 0 I 11
s Bos_indicus.CM003021.1                                138138130 17 - 161108492 TA---GA-GCCNAAA-------T-T-T-TCA
i Bos_indicus.CM003021.1                                C 0 I 11
s Bos_mutus.JH883513.1                                     570504 17 -    998990 TA---GA-GCCGAAA-------T-T-T-TCA
i Bos_mutus.JH883513.1                                  C 0 I 11
s Bos_taurus.CM000177.6                                 136293863 17 - 158972876 TA---GA-GCCGAAA-------T-T-T-TCA
i Bos_taurus.CM000177.6                                 C 0 I 11
s Bubalus_bubalis.KI419065.1                              1229619 16 -   1914593 TA---GA-GCC-AAA-------T-T-T-TCA
i Bubalus_bubalis.KI419065.1                            C 0 I 11
s Cacajao_ayresi.k141_724503                               111971 17 -    171031 TA---GA-ACAGAAA-------A-T-T-TCA
i Cacajao_ayresi.k141_724503                            C 0 I 5
s Cacajao_calvus.k141_96166                                 10997 17 +    125063 TA---GA-ACAGAAA-------A-T-T-TCA
i Cacajao_calvus.k141_96166                             C 0 I 5
s Cacajao_hosomi.k141_303789                                13045 17 -    216513 TA---GA-ACAGAAA-------A-T-T-TCA
i Cacajao_hosomi.k141_303789                            C 0 I 5
s Cacajao_melanocephalus.k141_1160263                        5585 17 -    134917 TA---GA-ACAGAAA-------A-T-T-TCA
i Cacajao_melanocephalus.k141_1160263                   C 0 I 5
s Camelus_bactrianus.KN276303.1                           3218203 17 -   8989139 TA---GA-GCAGAAG-------A-T-T-TTA
i Camelus_bactrianus.KN276303.1                         C 0 I 6
s Camelus_dromedarius.KN271192.1                           395908 17 -  15254737 TA---GA-GCAGAAG-------A-T-T-TTA
i Camelus_dromedarius.KN271192.1                        C 0 I 6
s Camelus_ferus.KB016973.1                                2971641 17 +   6889770 TA---GA-GCAGAAG-------A-T-T-TTA
i Camelus_ferus.KB016973.1                              C 0 I 6
s CanFam4.chr31                                          11516734 11 +  39901454 TA---GG-TCAGAAA----------------
i CanFam4.chr31                                         C 0 I 15
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   11752 11 +     87036 TA---GG-TCAGAAA----------------
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 I 15
s Canis_lupus_dingo.QKWQ01001993.1                       11263395 11 -  35597290 TA---GG-TCAGAAA----------------
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 I 15
s Canis_lupus_familiaris.chr31                           11085924 11 +  39895921 TA---GG-TCAGAAA----------------
i Canis_lupus_familiaris.chr31                          C 0 I 15
s Canis_lupus_orion.HG994411.1                           16452948 11 -  44759192 TA---GG-TCAGAAA----------------
i Canis_lupus_orion.HG994411.1                          C 0 I 15
s Capra_aegagrus.CM003214.1                              21323874 17 + 157394656 TA---GA-GCCGAAA-------T-T-C-TCA
i Capra_aegagrus.CM003214.1                             C 0 I 11
s Capra_hircus.CM004562.1                               135705101 17 - 157403528 TA---GA-GCCGAAA-------T-T-C-TCA
i Capra_hircus.CM004562.1                               C 0 I 11
s Capromys_pilorides.CapPil_scaffold_933029                   267 17 +      1311 TA---GA-GTAGAAA-------A-T-T-TCA
i Capromys_pilorides.CapPil_scaffold_933029             n 29 I 150
s Carlito_syrichta.NW_007248099.1                          307185 17 +    345090 TA---GA-GCAGAAA-------A-T-T-TCA
i Carlito_syrichta.NW_007248099.1                       C 0 I 4
s Carollia_perspicillata.CarPer_scaffold_4436               58137 17 +     67245 CA---GA-GCAGAAA-------A-T-T-TCA
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 I 11
s Castor_canadensis.CasCan_scaffold_47037                   28629 17 +     33760 CA---GA-CCAGAAA-------A-T-T-TCA
i Castor_canadensis.CasCan_scaffold_47037               C 0 I 4
s Catagonus_wagneri.CatWag_scaffold_1305                   157420 17 -    276539 TA---GA-GCAGAAA-------T-T-T-TCA
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 I 5
s Cavia_aperea.AVPZ01000278.1                            15784787 17 -  24422027 tt---gg-gcAAATG-------A-T-T-TCA
i Cavia_aperea.AVPZ01000278.1                           C 0 I 4
s Cavia_porcellus.DS562889.1                             15796721 17 -  24440124 tt---gg-gcaAATA-------A-T-T-TCA
i Cavia_porcellus.DS562889.1                            C 0 I 4
s Cavia_tschudii.CavTsc_scaffold_488                       174912 17 +    436027 TT---GG-GCAAATA-------A-T-T-TCA
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 I 4
s Cebus_albifrons.Contig22                               18888824 17 -  29618158 TA---GA-AGAGAAA-------A-T-T-TCA
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 6368 17 -     26817 TA---GA-AGAGAAA-------A-T-T-TCA
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                10608 17 +     25043 TA---GA-AGAGAAA-------A-T-T-TCA
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         6218 17 +     21754 TA---GA-GCAGAAA-------A-T-T-TCA
i Cephalopachus_bancanus.k141_702587                    C 0 I 4
s Ceratotherium_simum.JH767818.1                          4362515 17 +   7569818 ta---ga-GCAGAAA-------A-C-T-TCA
i Ceratotherium_simum.JH767818.1                        C 0 I 11
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         2267 17 -      9338 TA---GA-GCAGAAA-------A-C-T-TCA
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 I 11
s Cercocebus_atys.KQ010443.1                              6552746 17 +   6739814 TA---GA-ACAGAAA-------A-T-T-TCA
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      54223 17 -     54931 TA---GA-ACAGAAA-------A-T-T-TCA
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         19207 17 -     19697 TA---GA-ACAGAAA-------A-T-T-TCA
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         56738 17 -    107033 TA---GA-ACAGAAA-------A-T-T-TCA
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        3178 17 -      3853 TA---GA-ACAGAAA-------A-T-T-TCA
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          27114 17 +     30494 TA---GA-ACGGAAA-------A-T-T-TCA
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           3138 17 -      4022 TA---GA-ACAGAAA-------A-T-T-TCA
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          3032 17 -      3505 TA---GA-ACGGAAA-------A-T-T-TCA
i Cercopithecus_hamlyni.k141_381099                     C 0 I 9
s Cercopithecus_lowei.k141_623764                           21820 17 +     35983 TA---GA-ACGGAAA-------A-T-T-TCA
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11988357 17 +  12117833 TA---GA-ACGGAAA-------A-T-T-TCA
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46475110 17 +  46592721 TA---GA-ACGGAAA-------A-T-T-TCA
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      32939 17 +     33420 TA---GA-ACGGAAA-------A-T-T-TCA
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        2973 17 -      3443 TA---GA-ACGGAAA-------A-T-T-TCA
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      3966 17 -      4669 TA---GA-ACGGAAA-------A-T-T-TCA
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        3759 17 -      4411 TA---GA-ACGGAAA-------A-T-T-TCA
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         3289 17 -      4205 TA---GA-ACAGAAA-------A-T-T-TCA
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_2711798           310 17 -       616 TC---GA-GGAGAGA-------A-T-G-TCA
i Chaetophractus_vellerosus.ChaVel_scaffold_2711798     C 0 I 10
s Cheirogaleus_major.k141_1157592                           57132 17 -     68416 TA---GA-GCAGAAA-------A-T-T-TTA
i Cheirogaleus_major.k141_1157592                       C 0 I 4
s Cheirogaleus_medius.k141_133808                            6174 17 +     13308 TA---GA-GCAGAAA-------A-T-T-TTA
i Cheirogaleus_medius.k141_133808                       C 0 I 4
s Cheracebus_lucifer.k141_619653                             3633 17 -     18223 TA---AA-ACAGAAA-------A-T-T-TCA
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             20656 17 +     25473 TA---AA-ACAGAAA-------A-T-T-TCA
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           39695 17 +     57117 TA---AA-ACAGAAA-------A-T-T-TCA
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          44370 17 +     54541 TA---AA-ACAGAAA-------A-T-T-TCA
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15959953 16 +  43084221 -A---GG-GTAGAAA-------A-T-T-TCa
i Chinchilla_lanigera.JH721867.1                        C 0 I 13
s Chiropotes_israelita.k141_1189915                         69193 17 +    196370 TA---GA-ACAGAAA-------A-T-T-TCA
i Chiropotes_israelita.k141_1189915                     C 0 I 5
s Chiropotes_sagulatus.k141_773804                          13373 17 +     40510 TA---GA-ACAGAAA-------A-T-T-TCA
i Chiropotes_sagulatus.k141_773804                      C 0 I 5
s Chlorocebus_aethiops.ctg22                             15136573 17 -  15256731 TA---GA-ACACAAA-------A-T-T-TCA
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      31619 17 -     53260 TA---GA-ACACAAA-------A-T-T-TCA
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101142068 17 + 101219884 aa---ga-acagaaa-------a-t-t-tca
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                15096 17 -     21363 TG---GA-CCATAAA-------A-T-G-TCA
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 I 4
s Choloepus_hoffmanni.KN194586.1                           760407 17 +    964067 TG---GA-CCATAAA-------A-T-G-TCA
i Choloepus_hoffmanni.KN194586.1                        C 0 I 4
s Colobus_angolensis.KN985967.1                          10880647 17 +  10971483 TA---GA-ACAGAAA-------A-T-T-TCA
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147661804 17 + 156195979 TA---GA-ACAGAAA-------A-T-T-TCA
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            13792 17 +     23629 TA---GA-ACAGAAA-------A-T-T-TCA
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60611267 16 +  78930452 AA---TGTTCAGC-T-------A-T-T--TA
i Condylura_cristata.JH655880.1                         C 0 I 4
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         38244 13 -     40477 --------GAAGAAA-------A-T-T-CCA
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     I 2 I 20
s Cricetomys_gambianus.CriGam_scaffold_949                 276579 17 -    399297 TA---GA-GTATGCA-------A-T-T-TCA
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 I 4
s Cricetulus_griseus.LT883672.1                          53027203 17 +  72327488 ta---GA-GCATACA-------A-T-T-TCA
i Cricetulus_griseus.LT883672.1                         C 0 I 4
s Crocidura_indochinensis.CroInd_scaffold_38409             18324 17 -     19186 CA---GA-GTAGAAT-------A-T-T-TCA
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 I 17
s Cryptoprocta_ferox.CryFer_flattened_line_19014            50025 11 -     70449 GA---GA-GCAGAAA----------------
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 I 15
s Ctenodactylus_gundi.CteGun_scaffold_447                  206339 17 -    956709 TA---GA-GCAGAGA-------T-T-T-TCA
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 I 4
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 28723 17 -     67205 TA---GT-GTAGAAA-------A-C-T-TCA
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 I 182
s Cuniculus_paca.CunPac_flattened_line_16637                15945 17 +     26546 TT---GG-AGATAAA-------A-T-T-TCA
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 I 4
s Dasyprocta_punctata.DasPun_flattened_line_634             57044 17 -    236241 TT---GG-GCAGAAA-------A-T-T-TCA
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 I 4
s Dasypus_novemcinctus.JH568778.1                          180852 17 -   6883506 TC---AA-GCAGACA-------A-T-G-TCA
i Dasypus_novemcinctus.JH568778.1                       C 0 I 10
s Daubentonia_madagascariensis.ctg11                     16842989 17 +  31942871 TA---AA-GCAGACA-------A-T-T-TCA
i Daubentonia_madagascariensis.ctg11                    C 0 I 4
s Delphinapterus_leucas.KZ290064.1                       80035485 17 -  96802777 ta---GA-GCAGAAA-------A-T-T-TCA
i Delphinapterus_leucas.KZ290064.1                      C 0 I 11
s Desmodus_rotundus.KZ672188.1                           18697447 17 -  18957592 TA---GG-gcagaaa-------a-t-t-tca
i Desmodus_rotundus.KZ672188.1                          C 0 I 11
s Dicerorhinus_sumatrensis.PEKH010003161.1                 321162 17 +    993696 ta---gA-GCAGAAA-------A-C-T-TCA
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 I 11
s Diceros_bicornis.DicBicMic_scaffold_9545                   1814 17 +    151128 TA---GA-GCAGAAA-------A-C-T-TCA
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 I 11
s Dinomys_branickii.DinBra_scaffold_1996                   155836 17 +    228994 -A---GG-GCAAAAA-------A-TTT-TCA
i Dinomys_branickii.DinBra_scaffold_1996                C 0 I 4
s Dipodomys_ordii.KN672545.1                              3653551 17 +   4240102 tg---ga-GCAGAAA-------A-C-C-CTA
i Dipodomys_ordii.KN672545.1                            C 0 I 12
s Dipodomys_stephensi.DipSte_scaffold_44365                 25115 17 +     28912 TG---GA-ACAGAAA-------A-C-C-CTA
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 I 12
s Dolichotis_patagonum.DolPat_scaffold_14102                34305 17 -     73477 TT---GG-GCAGAGG-------A-T-T-TCA
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 I 3
s Echinops_telfairi.JH980316.1                           22993506 16 -  44670279 -A---GA-GCAGAAA-------A-T-T-TCA
i Echinops_telfairi.JH980316.1                          I 3 I 4
s Eidolon_helvum.KE772537.1                                 10826 17 +     24177 aa---ga-acagaaa-------t-a-t-tca
i Eidolon_helvum.KE772537.1                             C 0 I 11
s Elaphurus_davidianus.JRFZ01086400.1                     1490147 17 +   1727528 TG---GA-GCTGAAA-------T-T-T-TCA
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 I 11
s Elephantulus_edwardii.JH947210.1                        7805368  8 +  15467074 GA---TA-GCAG-------------------
i Elephantulus_edwardii.JH947210.1                      I 190 C 0
s Ellobius_lutescens.LOEQ01003611.1                        237857 17 -    369425 ta---ga-gaatgcA-------A-T-T-TCA
i Ellobius_lutescens.LOEQ01003611.1                     C 0 I 4
s Ellobius_talpinus.LOJH01090055.1                           4873 17 -      7838 tg---ga-gAATACA-------A-T-T-TCA
i Ellobius_talpinus.LOJH01090055.1                      C 0 I 4
s Enhydra_lutris.KZ291749.1                              85869808 11 +  99434291 TA---GA-TCAGAAA----------------
i Enhydra_lutris.KZ291749.1                             C 0 I 15
s Eptesicus_fuscus.JH977687.1                             4702404 17 +   6522550 ta---ga-GCAGAAA-------A-T-T-TCA
i Eptesicus_fuscus.JH977687.1                           C 0 I 7
s Equus_asinus.JREZ01000062.1                             5851585 17 -   7175178 cg---GA-GCAGAAA-------A-T-T-TCA
i Equus_asinus.JREZ01000062.1                           C 0 I 11
s Equus_caballus.CM000402.2                              13350088 17 +  41866177 cg---GA-GCAGAAA-------A-T-T-TCA
i Equus_caballus.CM000402.2                             C 0 I 11
s Equus_przewalskii.ATBW01073585.1                          11578 17 +     92910 cg---GA-GCAGAAA-------A-T-T-TCA
i Equus_przewalskii.ATBW01073585.1                      C 0 I 11
s Erinaceus_europaeus.JH835290.1                         11531120 12 +  16010500 CA---GA-GCAGGAA-------A--------
i Erinaceus_europaeus.JH835290.1                        C 0 I 22
s Erythrocebus_patas.Contig8                             48768751 17 -  48907691 TA---GA-ACAGAAA-------A-T-T-TCA
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          313686 17 +    330699 TA---GA-GCAGAAA-------A-T-T-TCA
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 I 11
s Eubalaena_japonica.EubJap_flattened_line_7756             60138 17 +     89355 TA---GA-GCAGAAA-------A-T-T-TCA
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 I 11
s Eulemur_albifrons.k141_715837                              3179 17 +     13586 TA---GA-GCAGAAA-------A-T-T-TCA
i Eulemur_albifrons.k141_715837                         C 0 I 4
s Eulemur_collaris.k141_311830                               3114 17 -      6809 TA---GA-GCAGAAA-------A-T-T-TCA
i Eulemur_collaris.k141_311830                          C 0 I 4
s Eulemur_coronatus.k141_3240342                             9589 17 +     36558 TA---GA-GCAGAAA-------A-T-T-TCA
i Eulemur_coronatus.k141_3240342                        C 0 I 4
s Eulemur_flavifrons.k141_903901                             5905 17 +     60246 TA---GA-GCAGAAA-------A-T-T-TCA
i Eulemur_flavifrons.k141_903901                        C 0 I 4
s Eulemur_fulvus.k141_653297                                 9387 17 +    109717 TA---GA-GCAGAAA-------A-T-T-TCA
i Eulemur_fulvus.k141_653297                            C 0 I 4
s Eulemur_macaco.k141_1341545                               13767 17 +     16540 TA---GA-GCAGAAA-------A-T-T-TCA
i Eulemur_macaco.k141_1341545                           C 0 I 4
s Eulemur_mongoz.k141_825972                                14042 17 +     27497 TA---GA-GCAGAAA-------A-T-T-TCA
i Eulemur_mongoz.k141_825972                            C 0 I 4
s Eulemur_rubriventer.k141_411740                           16508 17 +     26808 TA---GA-GCAGAAA-------A-T-T-TCA
i Eulemur_rubriventer.k141_411740                       C 0 I 12
s Eulemur_rufus.k141_1620292                                31232 17 +     46535 TA---GA-GCAGAAA-------A-T-T-TCA
i Eulemur_rufus.k141_1620292                            C 0 I 4
s Eulemur_sanfordi.k141_186399                              13955 17 -     29447 TA---GA-GCAGAAA-------A-T-T-TCA
i Eulemur_sanfordi.k141_186399                          C 0 I 4
s Felis_catus.CM001386.2                                129890986 11 - 159252932 TG---GG-GTAGAAA----------------
i Felis_catus.CM001386.2                                C 0 I 15
s Felis_catus_fca126.CM031420.1                         129278058 11 - 158578461 TG---GG-GTAGAAA----------------
i Felis_catus_fca126.CM031420.1                         C 0 I 15
s Felis_nigripes.FelNig_flattened_line_8080                 19193 11 +     52776 TG---GG-GTAGAAA----------------
i Felis_nigripes.FelNig_flattened_line_8080             C 0 I 15
s Fukomys_damarensis.KN123630.1                          13890898 17 -  19261668 ta---gg-gcagaaa-------a-t-t-tca
i Fukomys_damarensis.KN123630.1                         C 0 I 4
s Galago_moholi.ctg555                                     209088 16 -    847004 -A---GA-GAAGAAA-------A-T-T-TCA
i Galago_moholi.ctg555                                  C 0 I 4
s Galago_senegalensis.k141_964197                           11469 14 -     43889 -A---G---CAGAAA-------A-T-T-TCA
i Galago_senegalensis.k141_964197                       C 0 I 4
s Galagoides_demidoff.k141_1769638                           8535 16 +     27357 -A---GA-GCAGAAA-------A-T-T-TCA
i Galagoides_demidoff.k141_1769638                      C 0 I 4
s Galeopterus_variegatus.GalVar_scaffold_354               154445 17 +    324696 TA---GA-GCAGAAA-------A-T-T-TCA
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 I 4
s Giraffa_tippelskirchi.LVKQ01S012154.1                    179947 17 -    189561 TA---GA-ACCAAAA-------T-T-T-TCA
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 I 11
s Glis_glis.GliGli_scaffold_79770                           10857 18 -     18683 TA---AA-GCAGAAA-------A-T-TTTCA
i Glis_glis.GliGli_scaffold_79770                       C 0 I 3
s Gorilla_beringei.k141_111300                               3335 17 -     14630 TA---GA-AAAGAAA-------A-T-T-TCA
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119650434 17 - 195582420 ta---ga-aaagaaa-------a-t-t-tca
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   75597 18 +    118900 AA---AA-GCAGAAA-------A-T-TTTCA
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 I 3
s Hapalemur_alaotrensis.k141_1198205                         3739 17 +      3980 TA---GA-GCAGAAA-------A-T-T-TCA
i Hapalemur_alaotrensis.k141_1198205                    C 0 I 4
s Hapalemur_gilberti.k141_97962                             26215 17 +     26611 TA---GA-GCAGAAA-------A-T-T-TCA
i Hapalemur_gilberti.k141_97962                         C 0 I 4
s Hapalemur_griseus.k141_1387522                             3675 17 +     56096 TA---GA-GCAGAAA-------A-T-T-TCA
i Hapalemur_griseus.k141_1387522                        C 0 I 4
s Hapalemur_meridionalis.k141_186231                        26952 17 -     42470 TA---GA-GCAGAAA-------A-T-T-TCA
i Hapalemur_meridionalis.k141_186231                    C 0 I 4
s Hapalemur_occidentalis.k141_797938                        43546 17 -     54384 TA---GA-GCAGAAA-------A-T-T-TCA
i Hapalemur_occidentalis.k141_797938                    C 0 I 4
s Helogale_parvula.HelPar_flattened_line_22962              15233 11 +     53719 GA---GA-GCTGAAA----------------
i Helogale_parvula.HelPar_flattened_line_22962          C 0 I 15
s Hemitragus_hylocrius.HemHyl_scaffold_16669                26146 17 -     91191 TA---GA-GCCGAAA-------T-T-C-TCA
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 I 11
s Heterocephalus_glaber.JH602058.1                        2549287 17 +  31725842 ta---gg-gcagaaa-------a-t-t-tca
i Heterocephalus_glaber.JH602058.1                      C 0 I 9
s Heterohyrax_brucei.HetBruBak_scaffold_25354               55700 17 +     73687 CA---GG-GTAGAAA-------A-T-T-TCA
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 I 9
s Hippopotamus_amphibius.HipAmp_scaffold_1308              145715 17 +    277961 TA---GA-GCAGGAA-------A-T-T-TCA
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 I 11
s Hipposideros_armiger.JXIK01001085.1                      277031 17 -    477199 aa---ga-gaagaaa-------a-t-t-tca
i Hipposideros_armiger.JXIK01001085.1                   C 0 I 11
s Hipposideros_galeritus.HipGal_scaffold_104691              6190 17 -      9143 AA---GA-GAAGAAA-------A-T-T-TCA
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 I 11
s Hoolock_leuconedys.ctg79                                      2592 17 -   7690867 TA---GA-ACAGAAA-------A-T-T-TCA
i Hoolock_leuconedys.ctg79                                 C 0 I 13
s Hyaena_hyaena.HyaHya_flattened_line_20729                 14329 10 -     67322 -A---GA-GGAGAAA----------------
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 I 15
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           17208 17 -    119109 TT---AG-GCAGGTG-------A-T-T-TCA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 I 4
s Hylobates_abbotti.k141_493872                              3156 17 +      5897 TA---GA-ACAGAAA-------A-T-T-TCA
i Hylobates_abbotti.k141_493872                         C 0 I 5
s Hylobates_agilis.k141_1485652                              1576 17 -      1697 TA---GA-ACAGAAA-------A-T-T-TCA
i Hylobates_agilis.k141_1485652                         C 0 I 5
s Hylobates_klossii.k141_466549                              9600 17 +     11537 TA---GA-ACAGAAA-------A-T-T-TCA
i Hylobates_klossii.k141_466549                         C 0 I 5
s Hylobates_pileatus_b.ContigUN                                 14622701 17 -  25970782 TA---GA-ACAGAAA-------A-T-T-TCA
i Hylobates_pileatus_b.ContigUN                                C 0 I 5
s Hylobates_muelleri.k141_1133650                            2591 17 -      2775 TA---GA-ACAGAAA-------A-T-T-TCA
i Hylobates_muelleri.k141_1133650                       C 0 I 5
s Hylobates_pileatus_a.tarseq_592                             32088 17 -     60944 TA---GA-ACAGAAA-------A-T-T-TCA
i Hylobates_pileatus_a.tarseq_592                         C 0 I 5
s Hystrix_cristata.HysCri_scaffold_50788                     4334 17 +     22540 TA---GG-GCATAAA-------A-T-T-TCA
i Hystrix_cristata.HysCri_scaffold_50788                C 0 I 4
s Ictidomys_tridecemlineatus.JH393315.1                   7124222 17 +  13083262 TA---CA-gcagaaa-------t-t-t-tca
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 I 4
s Indri_indri.k141_1884019                                   1420 17 -      2196 TA---GA-GAAGAAA-------A-T-T-TAA
i Indri_indri.k141_1884019                              C 0 I 4
s Inia_geoffrensis.IniGeo_flattened_line_66725               7473 10 +     17520 TA---GA-GCAGAA-----------------
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 I 13
s Jaculus_jaculus.JH725517.1                              8563745 21 +  11848649 TG---GA-CCACAAAGCTTCAGA-T-A----
i Jaculus_jaculus.JH725517.1                            C 0 I 1
s Kogia_breviceps.KogBre_flattened_line_35920               22298 17 +     37189 TA---GA-GCAGAAA-------A-T-T-TCA
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 I 11
s Lagothrix_lagothricha.k141_12968                          48199 17 -    147782 TA---GA-ACAGAAA-------A-T-T-TCA
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   112197 17 -    115756 TA---GA-GCAGAAA-------A-T-T-TCA
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 I 11
s Lemur_catta.scaffold_1                                258405235 17 - 285822530 TA---GA-GCAGAAA-------A-T-T-TCA
i Lemur_catta.scaffold_1                                C 0 I 4
s Lepilemur_ankaranensis.k141_884009                        22104 17 +     39228 TA---GA-GCAGAAA-------A-T-T-TCA
i Lepilemur_ankaranensis.k141_884009                    C 0 I 4
s Lepilemur_dorsalis.k141_134267                            51479 17 +     63517 TA---GA-GCAGAAA-------A-T-T-TCA
i Lepilemur_dorsalis.k141_134267                        C 0 I 4
s Lepilemur_ruficaudatus.k141_617879                        76723 17 +    116806 TA---GA-GCAGAAA-------A-T-T-TCA
i Lepilemur_ruficaudatus.k141_617879                    C 0 I 4
s Lepilemur_septentrionalis.k141_578524                     29743 17 -     33031 TA---GA-GCAGAAA-------A-T-T-TCA
i Lepilemur_septentrionalis.k141_578524                 C 0 I 4
s Leptonychotes_weddellii.KB714749.1                      3084025 11 -   3498232 CA---AA-TCAGAAA----------------
i Leptonychotes_weddellii.KB714749.1                    C 0 I 15
s Lepus_americanus.LepAme_scaffold_62849                    11210 17 +     22452 TA---GT-GCAGAAA-------A-T-A-TCA
i Lepus_americanus.LepAme_scaffold_62849                C 0 I 4
s Lipotes_vexillifer.KE558548.1                            134633 17 +   3060487 ta---GA-GCAGAAA-------A-T-T-TCA
i Lipotes_vexillifer.KE558548.1                         C 0 I 11
s Lophocebus_aterrimus.ctg55                             19245834 17 +  19376315 TA---GA-ACAGAAA-------A-T-T-TCA
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            8835 17 +     84689 CA---AA-GCAGAAA-------A-T-T-TCA
i Loris_lydekkerianus.k141_550999                       C 0 I 4
s Loris_tardigradus.ctg97                                 3776586 17 +   6799190 CA---AA-GCAGAAA-------A-T-T-TCA
i Loris_tardigradus.ctg97                               C 0 I 4
s Loxodonta_africana.GL010040.1                          20590346 17 -  62548349 CA---GA-ACAGGAA-------A-T-T-TCA
i Loxodonta_africana.GL010040.1                         C 0 I 4
s Lycaon_pictus.CM007556.1                               11085380 11 +  39895028 TA---GG-TCAGAAA----------------
i Lycaon_pictus.CM007556.1                              C 0 I 15
s Macaca_arctoides.k141_2201161                             17518 16 +     74745 TA---GA-ACAGAAA-------A-T-T-TC-
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12704024 17 +  12821369 TA---GA-ACAGAAA-------A-T-T-TCA
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               6120 17 +      6569 TA---GA-ACAGAAA-------A-T-T-TCA
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           44422 17 +     63263 TA---GA-ACAGAAA-------A-T-T-TCA
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_925451                                  430 17 +     10231 TA---GA-ACAGAAA-------A-T-T-TCA
i Macaca_fuscata.k119_925451                            C 0 C 0
s Macaca_leonina.k141_3421209                                2571 17 +      3017 TA---GA-ACAGAAA-------A-T-T-TCA
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_mulatta.NC_041755.1                            196033101 17 + 196197964 TA---GA-ACAGAAA-------A-T-T-TCA
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11443207 17 +  11645122 TA---GA-ACAGAAA-------A-T-T-TCA
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_radiata.k141_1580474                                2963 17 -      3617 TA---GA-ACAGAAA-------A-T-T-TCA
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 13293 17 -     55006 TA---GA-ACAGAAA-------A-T-T-TCA
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43838330 17 +  43892939 TA---GA-ACAGAAA-------A-T-T-TCA
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                5552 17 -      5978 TA---GA-ACAGAAA-------A-T-T-TCA
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                700242 17 +    802869 TA---GA-ATAGAAA-------A-A-T-TCA
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 I 11
s Mandrillus_leucophaeus.scaffold125                     43434996 17 -  43563597 TA---GA-ACAGAAA-------A-T-T-TCA
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4447822 17 -   4543643 TA---GA-ACAGAAA-------A-T-T-TCA
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            144735 17 +    252755 TA---GA-GTAGAAA-------A-T-T-TCA
i Manis_javanica.JSZB01003966.1                         C 0 I 11
s Manis_pentadactyla.KN017078.1                             34810 17 +     58827 AA---GA-GTAGAAA-------A-T-T-TCA
i Manis_pentadactyla.KN017078.1                         C 0 I 11
s Marmota_marmota.CZRN01000005.1                         36872057 17 +  64221397 TA---CA-GCAGACA-------T-T-T-TCA
i Marmota_marmota.CZRN01000005.1                        C 0 I 4
s Megaderma_lyra.MegLyr_scaffold_3562                       62904 13 -    234502 --------GAAGGAA-------A-T-T-TCA
i Megaderma_lyra.MegLyr_scaffold_3562                   I 2 I 11
s Mellivora_capensis.MelCap_flattened_line_146202             618 11 -      1999 TA---GA-TCAGAAA----------------
i Mellivora_capensis.MelCap_flattened_line_146202       C 0 I 15
s Meriones_unguiculatus.MerUng_scaffold_52233               10158 17 +     15977 TA---AA-GCACACA-------A-T-T-TCA
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 I 8
s Mesocricetus_auratus.KB708139.1                         1044942 17 -  26018355 ca---ga-gcatACA-------A-T-T-TCA
i Mesocricetus_auratus.KB708139.1                       C 0 I 13
s Microcebus_murinus.CM007691.1                          16508354 17 +  47401472 ta---ga-gCAGAAA-------A-T-T-TCA
i Microcebus_murinus.CM007691.1                         C 0 I 4
s Microgale_talazaci.MicTal_scaffold_34660                  29931 17 -     48017 AA---GA-GTGGAAT-------A-T-G-CCA
i Microgale_talazaci.MicTal_scaffold_34660              I 3 I 4
s Micronycteris_hirsuta.MicHir_scaffold_37978               21322 17 -     32043 TA---GA-GCAGAAA-------A-T-T-TCA
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 I 11
s Microtus_ochrogaster.CM001673.1                        22818060 17 -  98408828 ta---ga-gcaTACA-------A-T-T-TCA
i Microtus_ochrogaster.CM001673.1                       C 0 I 4
s Miniopterus_natalensis.LDJU01000022.1                   8208070 17 +  10048721 ta---ga-gcaGGAA-------G-T-T-TCA
i Miniopterus_natalensis.LDJU01000022.1                 C 0 I 11
s Miniopterus_schreibersii.MinSch_scaffold_24116            32742 17 +     45743 TA---GA-GCGGAAA-------G-T-T-TCA
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 I 11
s Miopithecus_ogouensis.k141_2666161                        33651 17 +     34273 TA---GA-ACAGAAA-------A-T-T-TCA
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         9331 11 -    104932 TA---GA-TCAGAAA----------------
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 I 15
s Mirza_zaza.k141_226143                                     3754 17 +      8497 TA---GA-GCAGAAA-------A-T-T-TCA
i Mirza_zaza.k141_226143                                C 0 I 4
s Monodon_monoceros.MonMon_M_scaffold_5598                 145068 17 +    154973 TA---GA-GCAGAAA-------A-T-T-TCA
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 I 11
s Mormoops_blainvillei.MorMeg_scaffold_2952                159828 17 +    265003 TA---CA-GCAGAAA-------A-T-T-GCA
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 I 11
s Moschus_moschiferus.MosMos_scaffold_146101                 3249 17 -      4346 TA---GA-GCCGAAA-------T-T-T-TCA
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 I 11
s Mungos_mungo.MunMun_flattened_line_8729                  142924 11 -    168139 GA---GA-GCTGAAA----------------
i Mungos_mungo.MunMun_flattened_line_8729               C 0 I 15
s Murina_feae.MurFea_scaffold_2254                          17708 15 -    100666 -----GA-GCAGAAA-------A-G-T-TCA
i Murina_feae.MurFea_scaffold_2254                      C 0 I 11
s Mus_caroli.LT608236.1                                  70764547 18 +  92629107 ta---aa-gcatatt-------ttt-t-tca
i Mus_caroli.LT608236.1                                 C 0 I 10
s Mus_musculus.chr16                                     75487589 17 +  98207768 ta---aa-gcatatt-------t-t-t-tca
i Mus_musculus.chr16                                    C 0 I 10
s Mus_pahari.LT608305.1                                  67553784 10 +  89017189 ta---ga-gcatac-----------------
i Mus_pahari.LT608305.1                                 C 0 I 10
s Mus_spretus.CM004110.1                                 74328771 12 +  97876770 ta---aa-gcatatt-------t--------
i Mus_spretus.CM004110.1                                C 0 I 14
s Muscardinus_avellanarius.MusAve_scaffold_9643              9337 19 +     98495 CA---AA-GCAGAAA-----A-A-A-TTTTA
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 I 3
s Mustela_putorius.JH417978.1                             4422190 11 -  28371801 TA---GA-TCAGAAA----------------
i Mustela_putorius.JH417978.1                           C 0 I 15
s Myocastor_coypus.MyoCoy_scaffold_3653                     88253 17 -    117718 TA---GT-GTAGAAA-------T-T-T-TCA
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 I 12
s Myotis_brandtii.KE161952.1                               966032 17 +   8389877 ta---ga-GCAGAAA-------T-T-T-TCA
i Myotis_brandtii.KE161952.1                            C 0 I 11
s Myotis_davidii.KB114863.1                               5017722 17 +   6462685 ta---gg-gcagaaa-------a-t-t-tca
i Myotis_davidii.KB114863.1                             C 0 I 10
s Myotis_lucifugus.GL429887.1                             3463619 17 -   3747815 ta---ga-gcataaa-------a-t-t-tca
i Myotis_lucifugus.GL429887.1                           C 0 I 10
s Myotis_myotis.MyoMyo_scaffold_6123                         8813 17 +     66751 TA---GG-GCAGAAA-------T-T-T-TCA
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 I 10
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3694 17 -      8794 TA---GA-GCAGAAC-------A-T-G-TCA
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 I 4
s Nannospalax_galili.KL201303.1                            108670 17 +    362372 TA---GG-GCAACAA-------A-T-T-TTA
i Nannospalax_galili.KL201303.1                         C 0 I 4
s Nasalis_larvatus.k141_153429                               6030 17 +     48152 TA---GA-GCAGAAA-------A-T-T-TCA
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4482925 11 -  14209539 TA---GA-TCAGAAA----------------
i Neomonachus_schauinslandi.NINY01007774.1              C 0 I 15
s Neophocaena_asiaeorientalis.KZ688543.1                  3949681 17 -   4490290 tA---GA-GCAGAAA-------A-T-T-TCA
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 I 11
s Noctilio_leporinus.NocLep_scaffold_12062                  47935 17 +     94413 TA---GA-GCAGAAA-------A-T-T-TCA
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 I 11
s Nomascus_annamensis.k141_302224                               5 17 +      1516 TA---GA-ACAGAAA-------A-T-T-TCA
i Nomascus_annamensis.k141_302224                       C 0 I 5
s Nomascus_concolor.k141_49591                               1126 17 +      2014 TA---GA-ACAGAAA-------A-T-T-TCA
i Nomascus_concolor.k141_49591                          C 0 I 5
s Nomascus_gabriellae.k141_642452                              51 17 +      2851 TA---GA-ACAGAAA-------A-T-T-TCA
i Nomascus_gabriellae.k141_642452                       C 0 I 5
s Nomascus_siki_b.tarseq_80                             22930 17 -  18771707 TA---GA-ACAGAAA-------A-T-T-TCA
i Nomascus_siki_b.tarseq_80                         C 0 I 5
s Nomascus_siki_a.k141_595747                                   679 17 +      4512 TA---GA-ACAGAAA-------A-T-T-TCA
i Nomascus_siki_a.k141_595747                             C 0 I 5
s Nyctereutes_procyonoides.CAJHUB010000786.1                28373 11 +   3668941 TA---GG-TCAGAAA----------------
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 I 15
s Nycticebus_bengalensis.LG16                            65565474 17 -  95554990 CA---GA-GCAGAAA-------A-T-T-TCA
i Nycticebus_bengalensis.LG16                           C 0 I 4
s Nycticebus_coucang.k141_2051882                            2202 17 +      6470 CA---GA-GCAGAAA-------A-T-T-TCA
i Nycticebus_coucang.k141_2051882                       C 0 I 4
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65667822 17 +  89412551 CA---GA-GCAGAAA-------A-T-T-TCA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 I 4
s Ochotona_princeps.JH802095.1                            4994190 17 -  23139505 TA---CA-GACAAAA-------A-A-A-TCA
i Ochotona_princeps.JH802095.1                          C 0 I 4
s Octodon_degus.JH651621.1                                3683744 17 +  10294119 ga---gt-aCAGAAA-------A-C-C-TTA
i Octodon_degus.JH651621.1                              C 0 I 4
s Odobenus_rosmarus.KB229369.1                             677575 11 -   3126709 TA---GA-TCAGAAT----------------
i Odobenus_rosmarus.KB229369.1                          C 0 I 15
s Odocoileus_virginianus.KZ101650.1                       1078377 17 +   1425656 TG---GA-GCCTAAA-------T-T-T-TCA
i Odocoileus_virginianus.KZ101650.1                     C 0 I 11
s Okapia_johnstoni.LVCL01S0017931.1                         35672 17 +     78940 TA---GA-GCCAAAA-------T-T-T-TCA
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 I 11
s Ondatra_zibethicus.OndZib_scaffold_6821                  123333 17 +    145789 TA---GA-GCATACA-------A-T-T-TCA
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 I 9
s Onychomys_torridus.OnyTor_scaffold_12578                  35089 17 +     62360 TA---GA-GCATACA-------A-T-T-TCA
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 I 4
s Orcinus_orca.KB316965.1                                 7223365 17 -   7562323 TA---GA-GCAGAAA-------A-T-T-TCA
i Orcinus_orca.KB316965.1                               C 0 I 11
s Orycteropus_afer.OryAfe_flattened_line_13509              42283 17 -     66828 TA---GA-GAAGAAA-------A-T-T-TTA
i Orycteropus_afer.OryAfe_flattened_line_13509          I 217 I 4
s Oryctolagus_cuniculus.CM000803.1                      141873869 17 + 163896628 ta---ga-acagAAA-------A-C-A-TCA
i Oryctolagus_cuniculus.CM000803.1                      C 0 I 4
s Otocyon_megalotis.JAEUCK010005121.1                      305711 11 -    505867 TA---GG-TCAGAAA----------------
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 I 15
s Otolemur_crassicaudatus.k141_321880                       37178 16 +     38679 -A---GA-GCAGAAA-------A-T-T-TCA
i Otolemur_crassicaudatus.k141_321880                   C 0 I 4
s Otolemur_garnettii.GL873528.1                          18006620 16 -  38779656 -A---GA-GCAGAAA-------A-T-T-TCA
i Otolemur_garnettii.GL873528.1                         C 0 I 4
s Ovis_aries.CM001582.2                                 134075939 17 - 275406953 TA---GA-GCCGAAA-------T-T-C-TCA
i Ovis_aries.CM001582.2                                 C 0 I 11
s Ovis_canadensis.OviCan_scaffold_6251                      77153 17 +    140051 TA---GA-GCCGAAA-------T-T-C-TCA
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 I 11
s Pan_paniscus.CM003386.1                               127572679 17 - 205426864 ta---ga-aaagaaa-------a-t-t-tca
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.KZ622857.1                               325666 17 +    772158 TA---GA-ACAGAAA-------A-T-T-TCA
i Pan_troglodytes.KZ622857.1                            I 37 I 275
s Panthera_onca.PanOnc_flattened_line_1615                  32388 11 +    295523 TA---GG-GTAGAAA----------------
i Panthera_onca.PanOnc_flattened_line_1615              C 0 I 15
s Panthera_pardus.KV860323.1                              3636122 11 +  18214204 TA---GG-GTAGAAA----------------
i Panthera_pardus.KV860323.1                            C 0 I 15
s Panthera_tigris.KE721879.1                              5025769 11 -   6340057 TA---GG-GTAGAAA----------------
i Panthera_tigris.KE721879.1                            C 0 I 15
s Pantholops_hodgsonii.KE114631.1                         1064800 17 -   1292953 TA---GA-GCTGAAA-------T-T-C-TCA
i Pantholops_hodgsonii.KE114631.1                       C 0 I 11
s Papio_anubis.CM001492.2                               188153778 17 - 188283584 TA---GA-ACAGAAA-------A-T-T-TCA
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            49990 17 +     76494 TA---GA-ACAGAAA-------A-T-T-TCA
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47511175 17 +  47705337 TA---GA-ACAGAAA-------A-T-T-TCA
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 65152 17 -    104429 TA---GA-ACAGAAA-------A-T-T-TCA
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  14943 17 -     29451 TA---GA-ACAGAAA-------A-T-T-TCA
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                35346 17 +     35859 TA---GA-ACAGAAA-------A-T-T-TCA
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113685 11 -    135482 TA---GA-ACAGAAA----------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 I 15
s Perodicticus_ibeanus.k141_117958                           3228 17 -     23713 CA---GA-GCAGAGA-------A-T-T-TCA
i Perodicticus_ibeanus.k141_117958                      C 0 I 4
s Perodicticus_potto.k141_713187                            22526 17 -     27972 CA---GA-GCAGAGA-------A-T-T-TCA
i Perodicticus_potto.k141_713187                        C 0 I 4
s Perognathus_longimembris.PerPac_flattened_line_22291      41095 17 -     45160 TG---GA-GCAGAAA-------A-T-T-CTA
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 I 12
s Peromyscus_maniculatus.KI615518.1                       4948269 17 -   8017169 ta---ga-GTATACA-------a-t-t-tca
i Peromyscus_maniculatus.KI615518.1                     C 0 I 4
s Petromus_typicus.PetTyp_scaffold_33007                    10438 17 -     36578 TA---GT-GTAGAAC-------A-T-T-TCA
i Petromus_typicus.PetTyp_scaffold_33007                C 0 I 4
s Phocoena_phocoena.PhoPho_flattened_line_11948            119982 17 -    122454 TA---GA-GCAGAAA-------A-T-T-TCA
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 I 11
s Piliocolobus_badius.k141_1497351                           3036 17 -      3310 TA---GA-ACAGAAA-------A-T-T-TCA
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       22941 17 -     82327 TA---GA-ACAGAAA-------A-T-T-TCA
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           19688 17 +     19957 TA---GA-ACAGAAA-------A-T-T-TCA
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26737702 17 +  26888534 TA---GA-ACAGAAA-------A-T-T-TCA
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            95480 17 +    112873 TC---GA-GTAGAAA-------A-T-T-TCA
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 I 6
s Pithecia_albicans.k141_991845                             41680 17 -     61926 TA---GA-ACAGAAA-------A-T-T-TCA
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        23109 17 +     78826 TA---GA-ACAGAAA-------A-T-T-TCA
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              7060 17 -     15800 TA---GA-ACAGAAA-------A-T-T-TCA
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        10258 17 -     16101 TA---GA-ACAGAAA-------A-T-T-TCA
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          3567 17 +      9673 TA---GA-ACAGAAA-------A-T-T-TCA
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13472561 17 -  19735023 TA---GA-ACAGAAA-------A-T-T-TCA
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           11469 17 -     31692 TA---GA-ACAGAAA-------A-T-T-TCA
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           4048 17 +     21690 TA---GA-GCAGAAA-------A-T-T-TCA
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 I 11
s Plecturocebus_bernhardi.k141_959214                       20905 17 +     44506 TA---GA-ACAGAAG-------A-T-T-TCA
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        21115 17 +     67491 TA---GA-ACAGAAG-------A-T-T-TCA
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      11356 17 -     98129 TA---GA-ACAGAAG-------A-T-T-TCA
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     20961 17 +    147771 TA---GA-ACAGAAG-------A-T-T-TCA
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        21210 17 -     23762 TA---GA-ACAGAAG-------A-T-T-TCA
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          1677 17 -     55515 TA---GA-ACAGAAG-------A-T-T-TCA
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         21030 17 +    152463 TA---GA-ACAGAAG-------A-T-T-TCA
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      7790 17 +      8943 TA---GA-ACAGAAG-------A-T-T-TCA
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                         10750 17 +    134592 TA---GA-ACAGAAG-------A-T-T-TCA
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          21340 17 -     75465 TA---GA-ACAGAAG-------A-T-T-TCA
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              185227 17 -    373494 ta---ga-aaagaaa-------a-t-t-tca
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19805135 17 +  19899266 TA---GA-AAAGAAA-------A-T-T-TCA
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               3270 17 -     15069 TA---GA-ACAGAAA-------A-T-T-TCA
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              3404 17 +     14865 TA---GA-ACAGAAA-------A-T-T-TCA
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                75571 17 +     78963 CA---GG-GTAGAAA-------A-T-T-TCA
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 I 4
s Prolemur_simus.MPIZ01000048.1                           6846611 17 +  12164890 TA---GA-GCAGAAA-------A-T-T-TCa
i Prolemur_simus.MPIZ01000048.1                         C 0 I 4
s Propithecus_coquerelli.NW_012147997.1                    665229 17 -   2312742 NN---NN-NNNNNNN-------N-N-N-NNN
i Propithecus_coquerelli.NW_012147997.1                 C 0 I 4
s Propithecus_coronatus.k141_1353159                         1754 17 +     11805 TA---GA-GAAGAAA-------A-T-T-TAA
i Propithecus_coronatus.k141_1353159                    C 0 I 4
s Propithecus_diadema.k141_577245                           41089 17 +     52369 TA---GA-GAAGAAA-------A-T-T-TAA
i Propithecus_diadema.k141_577245                       C 0 I 4
s Propithecus_edwardsi.k141_1317105                         33478 17 -     44753 TA---GA-GAAGAAA-------A-T-T-TAA
i Propithecus_edwardsi.k141_1317105                     C 0 I 4
s Propithecus_perrieri.k141_7554                            15399 17 +     27322 TA---GA-GAAGAAA-------A-T-T-TAA
i Propithecus_perrieri.k141_7554                        C 0 I 4
s Propithecus_tattersalli.k141_907138                       15038 17 -     53241 TA---GA-GAAGAAA-------A-T-T-TAA
i Propithecus_tattersalli.k141_907138                   C 0 I 4
s Propithecus_verreauxi.k141_158021                         37309 17 -     48185 TA---GA-GAAGAAA-------A-T-T-TAA
i Propithecus_verreauxi.k141_158021                     C 0 I 4
s Psammomys_obesus.NESX01026517.1                           31698 17 +     77221 ta---aa-GCACACA-------A-T-T-TCA
i Psammomys_obesus.NESX01026517.1                       C 0 I 8
s Pteronotus_parnellii.KE867983.1                            2497 17 -     27784 TA---GA-Gcaggaa-------a-t-t-tca
i Pteronotus_parnellii.KE867983.1                       C 0 I 11
s Pteronura_brasiliensis.PteBra_flattened_line_1343        244284 11 -    344369 TA---GA-TCAGAAA----------------
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 I 15
s Pteropus_alecto.KB031157.1                             13244627 17 -  17261082 aa---ga-acagaaa-------c-a-t-tCA
i Pteropus_alecto.KB031157.1                            C 0 I 11
s Pteropus_vampyrus.KN525959.1                             602577 17 -   3946241 aa---ga-acagaaa-------t-a-t-tca
i Pteropus_vampyrus.KN525959.1                          C 0 I 11
s Puma_concolor.QAVW01000427.1                          131532351 11 - 161321710 TG---GG-GTAGAAA----------------
i Puma_concolor.QAVW01000427.1                          C 0 I 15
s Pygathrix_cinerea.k141_374971                             27399 17 +     56732 TA---GA-ACAGAAA-------A-T-T-TCA
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6803890 17 +   6970761 TA---GA-ACAGAAA-------A-T-T-TCA
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             3283 17 +     18040 TA---GA-ACAGAAA-------A-T-T-TCA
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                14454 17 +     68503 TG---GA-GCCTAAA-------T-T-T-TCA
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 I 11
s Rattus_norvegicus.chr11                                13913643 17 +  90463843 TA---GA-GCGTACA-------G-T-T-TCA
i Rattus_norvegicus.chr11                               C 0 I 10
s Rhinolophus_sinicus.LVEH01000179.1                      1786441 17 +   2252614 aa---ga-tcagaaa-------a-t-t-TCA
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 I 11
s Rhinopithecus_bieti.k119_102124                           13836 17 -     14454 TA---GA-ACAGAAA-------A-T-T-TCA
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206375162 17 - 206558726 TA---GA-ACAGAAA-------A-T-T-TCA
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44854062 17 -  45163003 TA---GA-ACAGAAA-------A-T-T-TCA
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                17917 17 +    109198 AA---GA-ACAGAAA-------T-A-T-TCA
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 I 11
s Saiga_tatarica.SaiTat_scaffold_82192                       6256 17 +     12214 TA---GC-GCTTAAA-------T-T-T-TCA
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 I 11
s Saimiri_boliviensis.NW_024100938.1                     15670783 17 -  43202129 TA---GA-ACAGAAA-------A-T-T-TCA
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        2649 17 +     34089 TA---GA-ACAGAAA-------A-T-T-TCA
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              2590 17 -     60842 TA---GA-ACAGAAA-------A-T-T-TCA
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              2685 17 +     67014 TA---GA-ACAGAAA-------A-T-T-TCA
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              2663 17 +     60816 TA---GA-ACAGAAA-------A-T-T-TCA
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 2600 17 -     76454 TA---GA-ACAGAAA-------A-T-T-TCA
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17339352 17 -  30362882 TA---GA-AGAGAAA-------A-T-T-TCA
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         18727 17 -     62485 TA---GA-AGAGAAA-------A-T-T-TCA
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   30018 16 -    114521 AA---TATTCAGA-T-------A-T-T--TA
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 I 4
s Semnopithecus_entellus.k141_1527475                       25822 17 +     26421 TA---GA-ACAGAAA-------A-T-T-TCA
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       6282 17 +     20762 TA---GA-ACAGAAA-------A-T-T-TCA
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         40017 17 +     40653 TA---GA-ACAGAAA-------A-T-T-TCA
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                           10574 17 -     12194 TA---GA-ACAGAAA-------A-T-T-TCA
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     23996 17 -     27512 TA---GA-ACAGAAA-------A-T-T-TCA
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         33015 17 -     33692 TA---GA-ACAGAAA-------A-T-T-TCA
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   97865 17 -    120886 TA---GA-GCATACA-------A-T-T-TCA
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 I 4
s Solenodon_paradoxus.SolPar_flattened_line_1012            16640 17 +    739146 AA---GA-GCAGGAT-------A-T-T-TCA
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 I 4
s Spermophilus_dauricus.KZ294190.1                        2238138 17 +   2842873 TA---CA-GCAGAAA-------T-T-T-TCA
i Spermophilus_dauricus.KZ294190.1                      C 0 I 4
s Spilogale_gracilis.SpiGra_flattened_line_905             233036 11 -    276980 TA---TA-GCAGAAA----------------
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 I 15
s Suricata_suricatta.SurSur_flattened_line_20339            25590 11 +     62062 GA---GA-GCTGAAA----------------
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 I 15
s Sus_scrofa.CM000824.4                                 189270507 17 + 218635234 TA---GA-ACAgaaa-------t-t-t-tca
i Sus_scrofa.CM000824.4                                 C 0 I 6
s Symphalangus_syndactylus.tarseq_24                        12958 17 -  13920577 TA---GA-ACAGAAA-------A-T-T-TCA
i Symphalangus_syndactylus.tarseq_24                    C 0 I 5
s Tadarida_brasiliensis.TadBra_scaffold_148405               4267 17 -      6063 CA---GA-ATAGAAA-------G-T-T-GCA
i Tadarida_brasiliensis.TadBra_scaffold_148405          I 51 T 366
s Tamandua_tetradactyla.TamTet_scaffold_26877               13370 17 +     45698 CA---GA-GCAGAAC-------A-T-G-TCA
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 I 4
s Tapirus_indicus.TapInd_scaffold_176                      805367 17 +   1148477 TA---GA-GCAGAAA-------A-T-T-TCA
i Tapirus_indicus.TapInd_scaffold_176                   C 0 I 11
s Tapirus_terrestris.TapTer_scaffold_14939                  56027 17 +     99546 TA---GA-GCAGAAA-------A-T-T-TCA
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 I 11
s Tarsius_lariang.k141_609102                               24668 17 +     42269 TA---GA-GCAGAAA-------A-T-T-TCA
i Tarsius_lariang.k141_609102                           C 0 I 4
s Tarsius_wallacei.k141_48636                               57984 17 +     65473 TA---GA-GCAGAAA-------A-T-T-TCA
i Tarsius_wallacei.k141_48636                           C 0 I 4
s Theropithecus_gelada.CM009951.1                       194005314 17 - 194193292 TA---GA-ACAGAAA-------A-T-T-TCA
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             37499 17 -     47444 TA---GG-GCAGAAA-------A-T-T-TCA
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 I 4
s Tolypeutes_matacus.TolMat_scaffold_269431                  2804 12 +      6782 TC---AA-GTAGAGA-------A--------
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 I 7
s Tonatia_saurophila.TonSau_scaffold_3334                  134506 17 -    259118 TA---GA-GCAGAAA-------A-T-T-TCA
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 I 11
s Trachypithecus_auratus.k141_738098                        24392 17 +     38948 TA---GA-ACAGAAA-------A-T-T-TCA
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   18119 17 -     32910 TA---GA-ACAGAAA-------A-T-T-TCA
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       24017 17 +     24652 TA---GA-ACAGAAA-------A-T-T-TCA
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      2895 17 -      3559 TA---GA-ACAGAAA-------A-T-T-TCA
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           40839 17 -     54611 TA---GA-ACAGAAA-------A-T-T-TCA
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       16840 17 +     17312 TA---GA-ACAGAAA-------A-T-T-TCA
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    24203 17 -     25040 TA---GA-ACAGAAA-------A-T-T-TCA
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          2864 17 +      3528 TA---GA-ACAGAAA-------A-T-T-TCA
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  49231 17 +     51589 TA---GA-ACAGAAA-------A-T-T-TCA
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       12407 17 +     14732 TA---GA-ACAGAAA-------A-T-T-TCA
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       2884 17 -     28054 TA---GA-ACAGAAA-------A-T-T-TCA
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44657679 17 -  44834318 TA---GA-ACAGAAA-------A-T-T-TCA
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        2688 17 +      3372 TA---GA-ACAGAAA-------A-T-T-TCA
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   3854 15 +     90398 -----GA-GCAGAAA-------G-T-T-TTA
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 I 5
s Trichechus_manatus.JH594618.1                          16080792 20 +  31416278 CAAGAGA-GCTGAAA-------A-T-T-TCA
i Trichechus_manatus.JH594618.1                         C 0 I 4
s Tupaia_chinensis.KB320831.1                             2790597 17 -   3938065 GT---AA-GCAGAAA-------A-T-T-TTA
i Tupaia_chinensis.KB320831.1                           C 0 I 4
s Tupaia_tana.TupTan_flattened_line_68454                    3121 17 +     13056 AT---AA-GCAAAAA-------A-T-T-TTA
i Tupaia_tana.TupTan_flattened_line_68454               C 0 I 4
s Tursiops_truncatus.MRVK01000923.1                      69312082 17 -  96451834 ta---gA-GCAGAAA-------A-T-T-TCA
i Tursiops_truncatus.MRVK01000923.1                     C 0 I 11
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 25212 15 -     25548 AA---TA-GCAGG-T-------A-C-T--CA
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 I 4
s Ursus_maritimus.KK498671.1                              6512840 11 +  28682327 TA---GA-TAAGAAA----------------
i Ursus_maritimus.KK498671.1                            C 0 I 15
s Varecia_rubra.k141_432109                                  3455 17 -     20643 TA---GA-GCAGAAA-------A-T-T-TCA
i Varecia_rubra.k141_432109                             C 0 I 4
s Varecia_variegata.k141_775891                             22997 17 -     33872 TA---GA-GCAGAAA-------A-T-T-TCA
i Varecia_variegata.k141_775891                         C 0 I 4
s Vicugna_pacos.KN269600.1                                1523312 17 -   2331223 TA---GA-GCAGAAG-------A-T-T-TTA
i Vicugna_pacos.KN269600.1                              C 0 I 6
s Vulpes_lagopus.VulLag_flattened_line_2045                135780 11 -    281493 TA---GG-TCGGAAA----------------
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 I 15
s Xerus_inauris.XerIna_scaffold_7898                       125229 17 -    134049 TA---GA-GCAGAAA-------A-T-T-TCA
i Xerus_inauris.XerIna_scaffold_7898                    C 0 I 4
s Zalophus_californianus.ZalCal_flattened_line_4097        212310 11 -    227762 TA---GA-TCAGAAA----------------
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 I 15
s Zapus_hudsonius.ZapHud_scaffold_64392                     13461 14 -     20485 TG---GA-TCGCAAA-------A-T-A----
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 I 1
s Ziphius_cavirostris.ZipCav_flattened_line_127025           5579 17 -      8775 TA---GA-GCAGAAA-------A-T-T-TCA
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 I 11
e Sorex_araneus.JH798170.1                               17748817 583 -  27805282 I
e Chrysochloris_asiatica.ChrAsi_scaffold_141308              7105 1700 -     12508 I
e Mesoplodon_bidens.MesBid_scaffold_183284                   2166 255 +      2166 T
e Macaca_tonkeana.k141_2870633                               2864 158 -     27140 T
e Macaca_nigra.k141_282495                                   2859 158 -     46448 T
e Macaca_maura.k141_251854                                  43912 158 -     79256 T

a score=0.000000
s hg38.chr4_GL000008v2_random                                9954 23 +    209709 CTTAC------TCACTTA---------A------TTTA---ACTT--TT
s Acinonyx_jubatus.LLWD01000356.1                         2032036 12 +   3721120 -----------------A---------A------TTTa---actt--ct
i Acinonyx_jubatus.LLWD01000356.1                       I 15 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    110713  8 -    189883 ------------------------------------TA---ATCT--TT
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 10 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10655381 12 +  23371972 -----------------A---------A------TTTA---ACTT--AC
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 15 C 0
s Ailurus_fulgens.LNAC01000003.1                          7092306 12 -  16596857 -----------------A---------A------TTTA---cctt--at
i Ailurus_fulgens.LNAC01000003.1                        I 15 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   11014 19 -     22067 TACAG------TT----C---------A------TTTA---ACTT--TT
i Allactaga_bullata.AllBul_scaffold_70162               I 1 C 0
s Allenopithecus_nigroviridis.k141_3103707                  60971 19 +     61638 CTT--------------ACTTA-----A------TTTA---ACTT--TT
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        52779 23 +     53391 CTT----ACTC------ACTTA-----A------TTTA---ACTT--TT
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         3504 23 +     72529 CTT----ACTC------ACTTA-----A------TTTA---ACTT--TT
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          3079 23 +      3797 CTT----ACTC------ACTTA-----A------TTTA---ACTT--TT
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             8253 15 -     18050 CTT--------------A---------A------TTTA---ATTT--TT
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  9366 15 -     11521 CTT--------------A---------A------TTTA---ATTT--TT
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              8930 15 -     21359 CTT--------------A---------A------TTTA---ATTT--TT
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_298055                                  221 15 +      1823 CTT--------------A---------A------TTTA---ATTT--TT
i Alouatta_juara.k141_298055                            C 0 C 0
s Alouatta_macconnelli.k141_1331706                          8221 15 -     10438 CTT--------------A---------A------TTTA---ATTT--TT
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            4877 15 +      7047 CTT--------------A---------A------TTTA---ATTT--TT
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             8163 15 +     10410 CTT--------------A---------A------TTTA---ATTT--TT
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            1966 15 -      4927 CTT--------------A---------A------TTTA---ATTT--TT
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             4896 15 +      6429 CTT--------------A---------A------TTTA---ATTT--TT
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3518826 12 +   4113121 -----------------A---------A------TTTA---ACTT--AC
i Ammotragus_lervia.NIVO01013474.1                      I 11 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      388971 12 -    631301 -----------------A---------A------TTTA---ACTT--AT
i Anoura_caudifer.AnoCau_scaffold_422                   I 11 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            29407 12 +     33004 -----------------A---------A------TTTA---ACTT--AC
i Antilocapra_americana.AntAmePen_scaffold_42841        I 11 C 0
s Aotus_azarae.k141_3170768                                 60614 15 +     78111 CTT--------------A---------A------TTTA---ACTT--TT
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            3555 15 +     22701 CTT--------------A---------A------TTTA---ACTT--TT
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5747512 15 +   9889416 ctt--------------a---------a------ttta---actt--tt
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             4097 15 -    104377 CTT--------------A---------A------TTTA---ACTT--TT
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               4103 15 +     23246 CTT--------------A---------A------TTTA---ACTT--TT
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     2117  8 +      5067 TTAAC------TT----T-------------------------------
i Aplodontia_rufa.AprRuf_scaffold_156013                I 10 I 1
s Arctocebus_calabarensis.k141_1161114                      16048 17 +     17483 TTCAC------TT----A---------A------TGTT---ACTT----
i Arctocebus_calabarensis.k141_1161114                  I 4 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 7369 12 -     29036 -----------------C---------A------TTCA---ACTT--AT
i Artibeus_jamaicensis.ArtJam_scaffold_41619            I 11 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9537347 15 +  39197703 CTT--------------A---------A------TTTA---ACTT--TT
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             58631 15 +     85812 CTT--------------A---------A------TTTA---ACTT--TT
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 9630 15 +     89302 CTT--------------A---------A------TTTA---ACTT--TT
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             14135 15 -     58268 CTT--------------A---------A------TTTA---ACTT--TT
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             62126 15 +    119057 CTT--------------A---------A------TTTA---ACTT--TT
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               4095 15 -     25888 CTT--------------A---------A------TTTA---ACTT--TT
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 4849 19 -     16375 TTCAT------TT----A---------A------TTTA---ACTT--TT
i Avahi_laniger.k141_2840928                            I 4 C 0
s Avahi_peyrierasi.k141_2689020                              1169 18 +      2719 TTCAT------TT----A---------A------TTTA---ACT---TT
i Avahi_peyrierasi.k141_2689020                         I 4 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26378827 12 +  51448160 -----------------A---------A------TTTA---ACTT--AT
i Balaenoptera_acutorostrata.KI537095.1                 I 11 C 0
s Balaenoptera_bonaerensis.DF502048.1                        4059 12 -     13118 -----------------A---------A------TTTA---ACTT--AT
i Balaenoptera_bonaerensis.DF502048.1                   I 11 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   41890 10 -     72089 ----------------------------------TTTA---ACTT--AC
i Beatragus_hunteri.BeaHun_scaffold_21644               I 8 C 0
s Bison_bison.KN264915.1                                  6557919 12 +   6870073 -----------------A---------A------TTTA---ACTT--AT
i Bison_bison.KN264915.1                                I 11 C 0
s Bos_indicus.CM003021.1                                138138158 12 - 161108492 -----------------A---------A------TTTA---ACTT--AT
i Bos_indicus.CM003021.1                                I 11 C 0
s Bos_mutus.JH883513.1                                     570532 12 -    998990 -----------------A---------A------TTTA---ACTT--AT
i Bos_mutus.JH883513.1                                  I 11 C 0
s Bos_taurus.CM000177.6                                 136293891 12 - 158972876 -----------------A---------A------TTTA---ACTT--AT
i Bos_taurus.CM000177.6                                 I 11 C 0
s Bubalus_bubalis.KI419065.1                              1229646 12 -   1914593 -----------------A---------A------TTTA---ACTT--AT
i Bubalus_bubalis.KI419065.1                            I 11 C 0
s Cacajao_ayresi.k141_724503                               111993  9 -    171031 -----------------------------------TTA---ACTT--TT
i Cacajao_ayresi.k141_724503                            I 5 C 0
s Cacajao_calvus.k141_96166                                 11019  9 +    125063 -----------------------------------TTA---ACTT--TT
i Cacajao_calvus.k141_96166                             I 5 C 0
s Cacajao_hosomi.k141_303789                                13067  9 -    216513 -----------------------------------TTA---ACTT--TT
i Cacajao_hosomi.k141_303789                            I 5 C 0
s Cacajao_melanocephalus.k141_1160263                        5607  9 -    134917 -----------------------------------TTA---ACTT--TT
i Cacajao_melanocephalus.k141_1160263                   I 5 C 0
s Camelus_bactrianus.KN276303.1                           3218226 12 -   8989139 -----------------C---------A------AATA---ACTT--AT
i Camelus_bactrianus.KN276303.1                         I 6 C 0
s Camelus_dromedarius.KN271192.1                           395931 12 -  15254737 -----------------C---------A------AATA---ACTT--AT
i Camelus_dromedarius.KN271192.1                        I 6 C 0
s Camelus_ferus.KB016973.1                                2971664 12 +   6889770 -----------------C---------A------AATA---ACTT--AT
i Camelus_ferus.KB016973.1                              I 6 C 0
s CanFam4.chr31                                          11516760 12 +  39901454 -----------------A---------A------TTTA---ACTT--AC
i CanFam4.chr31                                         I 15 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   11778 12 +     87036 -----------------A---------A------TTTA---ACTT--AC
i Canis_lupus_VD.CanFam_VD_scaffold_16982               I 15 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11263421 12 -  35597290 -----------------A---------A------TTTA---ACTT--AC
i Canis_lupus_dingo.QKWQ01001993.1                      I 15 C 0
s Canis_lupus_familiaris.chr31                           11085950 12 +  39895921 -----------------A---------A------TTTA---ACTT--AC
i Canis_lupus_familiaris.chr31                          I 15 C 0
s Canis_lupus_orion.HG994411.1                           16452974 12 -  44759192 -----------------A---------A------TTTA---ACTT--AC
i Canis_lupus_orion.HG994411.1                          I 15 C 0
s Capra_aegagrus.CM003214.1                              21323902 12 + 157394656 -----------------A---------A------TTTA---ACTT--AC
i Capra_aegagrus.CM003214.1                             I 11 C 0
s Capra_hircus.CM004562.1                               135705129 12 - 157403528 -----------------A---------A------TTTA---ACTT--AC
i Capra_hircus.CM004562.1                               I 11 C 0
s Capromys_pilorides.CapPil_scaffold_979108                   214 10 -      1248 ----------------------------------TTTA---ACTT--TG
i Capromys_pilorides.CapPil_scaffold_979108             I 29 C 0
s Carlito_syrichta.NW_007248099.1                          307206 19 +    345090 TTCAC------TT----A---------A------TTTA---ACTT--TT
i Carlito_syrichta.NW_007248099.1                       I 4 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               58165 12 +     67245 -----------------A---------A------TTTA---ACTT--AT
i Carollia_perspicillata.CarPer_scaffold_4436           I 11 C 0
s Castor_canadensis.CasCan_scaffold_47037                   28650 19 +     33760 TTCAC------TT----C---------A------TTTA---ACTT--TT
i Castor_canadensis.CasCan_scaffold_47037               I 4 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   157442  3 -    276539 --------------------------------------------T--AT
i Catagonus_wagneri.CatWag_scaffold_1305                I 5 C 0
s Cavia_aperea.AVPZ01000278.1                            15784808 19 -  24422027 TTCTC------TT----A---------A------TTTA---ACTT--TG
i Cavia_aperea.AVPZ01000278.1                           I 4 C 0
s Cavia_porcellus.DS562889.1                             15796742 19 -  24440124 TTCTC------TT----A---------A------TTTA---ACTT--TG
i Cavia_porcellus.DS562889.1                            I 4 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       174933 19 +    436027 TTCTC------TT----A---------A------TTTA---ACTT--TG
i Cavia_tschudii.CavTsc_scaffold_488                    I 4 C 0
s Cebus_albifrons.Contig22                               18888841 19 -  29618158 CTT--------------ACTTA-----A------TTTA---ACTT--TT
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 6385 19 -     26817 CTT--------------ACTTA-----A------TTTA---ACTT--TT
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                10625 19 +     25043 CTT--------------ACTTA-----A------TTTA---ACTT--TT
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         6239 19 +     21754 TTCAC------TT----A---------A------TTTA---ACTT--TT
i Cephalopachus_bancanus.k141_702587                    I 4 C 0
s Ceratotherium_simum.JH767818.1                          4362543 12 +   7569818 -----------------A---------A------TTTA---ACTT--AT
i Ceratotherium_simum.JH767818.1                        I 11 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         2295 12 -      9338 -----------------A---------A------TTTA---ACTT--AC
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    I 11 C 0
s Cercocebus_atys.KQ010443.1                              6552763 23 +   6739814 CTTAC------TC----ACTTA-----A------TTTA---ACTT--TT
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      54240 23 -     54931 CTTAC------TC----ACTTA-----A------TTTA---ACTT--TT
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         19224 23 -     19697 CTTAC------TC----ACTTA-----A------TTTA---ACTT--TT
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         56755 23 -    107033 CTTAC------TC----ACTTA-----A------TTTA---ACTT--TT
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        3195 18 -      3853 CTTAC------TC----ACTTAATTTAA---------------------
i Cercopithecus_ascanius.k141_3371259                   C 0 I 5
s Cercopithecus_cephus.k141_598190                          27131 13 +     30494 CTTAC------TC----ACTTA-----A---------------------
i Cercopithecus_cephus.k141_598190                      C 0 I 5
s Cercopithecus_diana.k141_1490386                           3155 23 -      4022 CTTAC------TC----ACTTA-----A------TTTA---ACTT--TT
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          3058  9 -      3505 -----------------------------------TTA---ACTT--TT
i Cercopithecus_hamlyni.k141_381099                     I 9 C 0
s Cercopithecus_lowei.k141_623764                           21837 13 +     35983 CTTAC------TC----ACTTA-----A---------------------
i Cercopithecus_lowei.k141_623764                       C 0 I 5
s Cercopithecus_albogularis.ctg51                              11988374 13 +  12117833 CTTAC------TC----ACTTA-----A---------------------
i Cercopithecus_albogularis.ctg51                             C 0 I 5
s Cercopithecus_mona.ctg12                               46475127 13 +  46592721 CTTAC------TC----ACTTA-----A---------------------
i Cercopithecus_mona.ctg12                              C 0 I 5
s Cercopithecus_neglectus.k141_1474992                      32956 13 +     33420 CTTAC------TC----ACTTA-----A---------------------
i Cercopithecus_neglectus.k141_1474992                  C 0 I 5
s Cercopithecus_nictitans.k141_675209                        2990 13 -      3443 CTTAC------TC----ACTTA-----A---------------------
i Cercopithecus_nictitans.k141_675209                   C 0 I 5
s Cercopithecus_petaurista.k141_2037881                      3983 18 -      4669 CTTAC------TC----ACTTAATTTAA---------------------
i Cercopithecus_petaurista.k141_2037881                 C 0 I 5
s Cercopithecus_pogonias.k141_1977419                        3776 13 -      4411 CTTAC------TC----ACTTA-----A---------------------
i Cercopithecus_pogonias.k141_1977419                   C 0 I 5
s Cercopithecus_roloway.k141_3372345                         3306 23 -      4205 CTTAC------TC----ACTTA-----A------TTTA---ACTT--TT
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_2711798           337  8 -       616 ------------------------------------TA---GCTT--AT
i Chaetophractus_vellerosus.ChaVel_scaffold_2711798     I 10 C 0
s Cheirogaleus_major.k141_1157592                           57153 19 -     68416 TTCAT------TT----A---------A------TTTA---ACTT--TT
i Cheirogaleus_major.k141_1157592                       I 4 C 0
s Cheirogaleus_medius.k141_133808                            6195 19 +     13308 TTCAT------TT----A---------A------TTTA---ACTT--AC
i Cheirogaleus_medius.k141_133808                       I 4 C 0
s Chinchilla_lanigera.JH721867.1                         15959982 10 +  43084221 ----------------------------------ttta---actt--tg
i Chinchilla_lanigera.JH721867.1                        I 13 C 0
s Chiropotes_israelita.k141_1189915                         69215  9 +    196370 -----------------------------------TTA---ACTT--TT
i Chiropotes_israelita.k141_1189915                     I 5 C 0
s Chiropotes_sagulatus.k141_773804                          13395  9 +     40510 -----------------------------------TTA---ACTT--TT
i Chiropotes_sagulatus.k141_773804                      I 5 C 0
s Cheracebus_lucifer.k141_619653                             3650  9 -     18223 CTTAC------TT----A---------A---------------------
i Cheracebus_lucifer.k141_619653                        C 0 I 5
s Cheracebus_lugens.k141_203936                             20673  9 +     25473 CTTAC------TT----A---------A---------------------
i Cheracebus_lugens.k141_203936                         C 0 I 5
s Cheracebus_regulus.k141_2128895                           39712  9 +     57117 CTTAC------TT----A---------A---------------------
i Cheracebus_regulus.k141_2128895                       C 0 I 5
s Cheracebus_torquatus.k141_315545                          44387  9 +     54541 CTTAC------TT----A---------A---------------------
i Cheracebus_torquatus.k141_315545                      C 0 I 5
s Chlorocebus_aethiops.ctg22                             15136590 23 -  15256731 CTT----ACTC------ACTTA-----A------TTTA---ACTT--TT
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      31636 23 -     53260 CTT----ACTC------ACTTA-----A------TTTA---ACTT--TT
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101142085 23 + 101219884 CTT----ACTC------ACTTA-----A------TTTA---ACTT--TT
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                15117 18 -     21363 TTCAC------TT----A---------A------T-TA---GCTT--TT
i Choloepus_didactylus.ChoDid_scaffold_36182            I 4 C 0
s Choloepus_hoffmanni.KN194586.1                           760428 18 +    964067 TTCAC------Tt----a---------a------t-ta---gctt--tt
i Choloepus_hoffmanni.KN194586.1                        I 4 C 0
s Colobus_angolensis.KN985967.1                          10880664 23 +  10971483 CTT----ACTC------ACTTA-----A------TTTA---ACTT--TT
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147661821 23 + 156195979 CTT----ACTC------ACTTA-----A------TTTA---ACTT--TT
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            13809 23 +     23629 CTT----ACTC------ACTTA-----A------TTTA---ACTT--TT
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60611287 11 +  78930452 -----------------T---------T-------CTA---ACTT--AG
i Condylura_cristata.JH655880.1                         I 4 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         38277 12 -     40477 -----------------T---------A------TTTA---ACTT--AC
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     I 20 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 276600 19 -    399297 CATAT------TT----A---------A------TTTA---ACTT--TG
i Cricetomys_gambianus.CriGam_scaffold_949              I 4 C 0
s Cricetulus_griseus.LT883672.1                          53027224 19 +  72327488 TACAT------TT----A---------A------TTTA---ACTT--TT
i Cricetulus_griseus.LT883672.1                         I 4 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             18358 13 -     19186 -----------------AC--------A------AGTG---TCTT--AC
i Crocidura_indochinensis.CroInd_scaffold_38409         I 17 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            50051 12 -     70449 -----------------A---------A------TTTA---ACTT--CT
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 15 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  206360 17 -    956709 TTCGC------TT----A---------A------TGTA---ACTC----
i Ctenodactylus_gundi.CteGun_scaffold_447               I 4 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 28922 19 -     67205 TTCTC------TT----A---------A------TTTA---ACTT--TG
i Ctenomys_sociabilis.CteSoc_scaffold_19489             I 182 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                15966 19 +     26546 TTCTC------TT----A---------A------TTTA---ACTT--TG
i Cuniculus_paca.CunPac_flattened_line_16637            I 4 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             57065 19 -    236241 TTCTC------TT----A---------A------TTTA---ACTT--TA
i Dasyprocta_punctata.DasPun_flattened_line_634         I 4 C 0
s Dasypus_novemcinctus.JH568778.1                          180879  8 -   6883506 ------------------------------------TG---GCTT--AT
i Dasypus_novemcinctus.JH568778.1                       I 10 C 0
s Daubentonia_madagascariensis.ctg11                     16843010 19 +  31942871 TTCAC------TT----A---------A------TTTA---ACTT--TT
i Daubentonia_madagascariensis.ctg11                    I 4 C 0
s Delphinapterus_leucas.KZ290064.1                       80035513  7 -  96802777 -------------------------------------A---ACTT--AT
i Delphinapterus_leucas.KZ290064.1                      I 11 C 0
s Desmodus_rotundus.KZ672188.1                           18697475 12 -  18957592 -----------------A---------A------TTTA---ACTT--AT
i Desmodus_rotundus.KZ672188.1                          I 11 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 321190 12 +    993696 -----------------A---------A------TTTA---ACTT--AT
i Dicerorhinus_sumatrensis.PEKH010003161.1              I 11 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   1842 12 +    151128 -----------------A---------A------TTTA---ACTT--AT
i Diceros_bicornis.DicBicMic_scaffold_9545              I 11 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   155857 19 +    228994 TTCTC------TT----A---------A------TTTA---ACTT--TG
i Dinomys_branickii.DinBra_scaffold_1996                I 4 C 0
s Dipodomys_ordii.KN672545.1                              3653580  7 +   4240102 -------------------------------------A---ATTT--TT
i Dipodomys_ordii.KN672545.1                            I 12 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 25144  7 +     28912 -------------------------------------A---ATTT--TT
i Dipodomys_stephensi.DipSte_scaffold_44365             I 12 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                34325 14 -     73477 -----------CT----A---------A------TTTA---ACTT--TG
i Dolichotis_patagonum.DolPat_scaffold_14102            I 3 C 0
s Echinops_telfairi.JH980316.1                           22993526 19 -  44670279 GTCAC------TG----A---------A------TTTA---GCTT--AT
i Echinops_telfairi.JH980316.1                          I 4 C 0
s Eidolon_helvum.KE772537.1                                 10854 12 +     24177 -----------------A---------A------TTTA---ACTT--AT
i Eidolon_helvum.KE772537.1                             I 11 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1490175 12 +   1727528 -----------------A---------A------TTTA---ACTT--AC
i Elaphurus_davidianus.JRFZ01086400.1                   I 11 C 0
s Ellobius_lutescens.LOEQ01003611.1                        237878 19 -    369425 Cactt------tt----a---------a------ttta---actt--tt
i Ellobius_lutescens.LOEQ01003611.1                     I 4 C 0
s Ellobius_talpinus.LOJH01090055.1                           4894 19 -      7838 cactt------tt----a---------a------ttta---actt--tt
i Ellobius_talpinus.LOJH01090055.1                      I 4 C 0
s Enhydra_lutris.KZ291749.1                              85869834 12 +  99434291 -----------------A---------a------ttta---attt--gt
i Enhydra_lutris.KZ291749.1                             I 15 C 0
s Eptesicus_fuscus.JH977687.1                             4702428 12 +   6522550 -----------------A---------A------TTTA---ACTT--AT
i Eptesicus_fuscus.JH977687.1                           I 7 C 0
s Equus_asinus.JREZ01000062.1                             5851613 12 -   7175178 -----------------A---------A------TTTA---ACTT--AC
i Equus_asinus.JREZ01000062.1                           I 11 C 0
s Equus_caballus.CM000402.2                              13350116 12 +  41866177 -----------------A---------A------TTTA---ACTT--AC
i Equus_caballus.CM000402.2                             I 11 C 0
s Equus_przewalskii.ATBW01073585.1                          11606 12 +     92910 -----------------A---------A------TTTA---ACTT--AC
i Equus_przewalskii.ATBW01073585.1                      I 11 C 0
s Erinaceus_europaeus.JH835290.1                         11531154 18 +  16010500 -----------------G---------ATGTCTACTTA---GTTT--AT
i Erinaceus_europaeus.JH835290.1                        I 22 C 0
s Erythrocebus_patas.Contig8                             48768768 23 -  48907691 CTT----ACTC------ACTTA-----A------TTTA---ACTT--TT
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          313714 12 +    330699 -----------------A---------A------TTTA---ACTT--AT
i Eschrichtius_robustus.EscRob_flattened_line_685       I 11 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             60166 12 +     89355 -----------------A---------A------TTTA---ACTT--AT
i Eubalaena_japonica.EubJap_flattened_line_7756         I 11 C 0
s Eulemur_albifrons.k141_715837                              3200 19 +     13586 TTCGT------TT----A---------A------TTTA---ACTT--TT
i Eulemur_albifrons.k141_715837                         I 4 C 0
s Eulemur_collaris.k141_311830                               3135 19 -      6809 TTCGT------TT----A---------A------TTTA---ACTT--TT
i Eulemur_collaris.k141_311830                          I 4 C 0
s Eulemur_coronatus.k141_3240342                             9610 19 +     36558 TTCGT------TT----A---------A------TTTA---ACTT--TT
i Eulemur_coronatus.k141_3240342                        I 4 C 0
s Eulemur_flavifrons.k141_903901                             5926 19 +     60246 TTCAT------TT----A---------A------TTTA---ACTT--TT
i Eulemur_flavifrons.k141_903901                        I 4 C 0
s Eulemur_fulvus.k141_653297                                 9408 19 +    109717 TTCGT------TT----A---------A------TTTA---ACTT--TT
i Eulemur_fulvus.k141_653297                            I 4 C 0
s Eulemur_macaco.k141_1341545                               13788 19 +     16540 TTCAT------TT----A---------A------TTTA---ACTT--TT
i Eulemur_macaco.k141_1341545                           I 4 C 0
s Eulemur_mongoz.k141_825972                                14063 19 +     27497 TTCGT------TT----A---------A------TTTA---ACTT--TT
i Eulemur_mongoz.k141_825972                            I 4 C 0
s Eulemur_rubriventer.k141_411740                           16537  6 +     26808 -----------------------------------------ACTT--TT
i Eulemur_rubriventer.k141_411740                       I 12 C 0
s Eulemur_rufus.k141_1620292                                31253 19 +     46535 TTTGT------TT----A---------A------TTTA---ACTT--TC
i Eulemur_rufus.k141_1620292                            I 4 C 0
s Eulemur_sanfordi.k141_186399                              13976 19 -     29447 TTTGT------TT----A---------A------TTTA---ACTT--TC
i Eulemur_sanfordi.k141_186399                          I 4 C 0
s Felis_catus.CM001386.2                                129891012 12 - 159252932 -----------------A---------A------TTTA---actt--ct
i Felis_catus.CM001386.2                                I 15 C 0
s Felis_catus_fca126.CM031420.1                         129278084 12 - 158578461 -----------------A---------A------TTTA---actt--ct
i Felis_catus_fca126.CM031420.1                         I 15 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 19219 12 +     52776 -----------------A---------A------TTTA---ACTT--CT
i Felis_nigripes.FelNig_flattened_line_8080             I 15 C 0
s Fukomys_damarensis.KN123630.1                          13890919 17 -  19261668 ttttg------tt----a---------a------tcTA---CCTT----
i Fukomys_damarensis.KN123630.1                         I 4 C 0
s Galago_moholi.ctg555                                     209108 19 -    847004 TTCAC------TT----A---------G------TTTT---ACTT--TT
i Galago_moholi.ctg555                                  I 4 C 0
s Galago_senegalensis.k141_964197                           11487 19 -     43889 TTCAC------TT----A---------G------TTTT---ACTT--TT
i Galago_senegalensis.k141_964197                       I 4 C 0
s Galagoides_demidoff.k141_1769638                           8555 19 +     27357 GTCAC------TT----A---------A------TTTT---ACTG--TT
i Galagoides_demidoff.k141_1769638                      I 4 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               154466 19 +    324696 ATCAC------TT----A---------T------TTTA---AGTT--TT
i Galeopterus_variegatus.GalVar_scaffold_354            I 4 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    179975 12 -    189561 -----------------A---------A------TTTA---ACTT--AC
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 11 C 0
s Glis_glis.GliGli_scaffold_79770                           10878  7 -     18683 -TCAC------TT----A-------------------------------
i Glis_glis.GliGli_scaffold_79770                       I 3 I 1
s Gorilla_beringei.k141_111300                               3352 23 -     14630 CTTAC------TCACTTA---------A------TTTA---ACTT--TT
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119650451 23 - 195582420 cttAC------TCACTTA---------A------TTTA---ACTT--TT
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   75618  7 +    118900 -TCAC------TT----A-------------------------------
i Graphiurus_murinus.GraMur_scaffold_4493               I 3 I 1
s Hapalemur_alaotrensis.k141_1198205                         3760 19 +      3980 TTCAT------TT----A---------A------TTTA---ACTT--TT
i Hapalemur_alaotrensis.k141_1198205                    I 4 C 0
s Hapalemur_gilberti.k141_97962                             26236 19 +     26611 TTCAT------TT----A---------A------TTTA---ACTT--TT
i Hapalemur_gilberti.k141_97962                         I 4 C 0
s Hapalemur_griseus.k141_1387522                             3696 19 +     56096 TTCAT------TT----A---------A------TTTA---ACTT--TT
i Hapalemur_griseus.k141_1387522                        I 4 C 0
s Hapalemur_meridionalis.k141_186231                        26973 19 -     42470 TTCAT------TT----A---------A------TTTA---ACTT--TT
i Hapalemur_meridionalis.k141_186231                    I 4 C 0
s Hapalemur_occidentalis.k141_797938                        43567 19 -     54384 TTCAT------TT----A---------A------TTTA---ACTT--TT
i Hapalemur_occidentalis.k141_797938                    I 4 C 0
s Helogale_parvula.HelPar_flattened_line_22962              15259 12 +     53719 -----------------A---------A------TTTA---ACTT--CT
i Helogale_parvula.HelPar_flattened_line_22962          I 15 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                26174 12 -     91191 -----------------A---------A------TTTA---ACTT--AC
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 11 C 0
s Heterocephalus_glaber.JH602058.1                        2549313 12 +  31725842 -----------tt----a---------a------ttta---actt----
i Heterocephalus_glaber.JH602058.1                      I 9 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               55726 14 +     73687 -----------TG----A---------A------TCTT---ATTT--AT
i Heterohyrax_brucei.HetBruBak_scaffold_25354           I 9 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              145743 12 +    277961 -----------------A---------A------TTTA---ACTT--AT
i Hippopotamus_amphibius.HipAmp_scaffold_1308           I 11 C 0
s Hipposideros_armiger.JXIK01001085.1                      277059 12 -    477199 -----------------A---------A------TTTA---ACGT--AT
i Hipposideros_armiger.JXIK01001085.1                   I 11 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              6218 12 -      9143 -----------------A---------A------TTTA---ACTT--AT
i Hipposideros_galeritus.HipGal_scaffold_104691         I 11 C 0
s Hoolock_leuconedys.ctg903                                     7140  9 -     61166 -----------------------------------TTA---A-TT-TTT
i Hoolock_leuconedys.ctg903                                n 13 T 2401
s Hyaena_hyaena.HyaHya_flattened_line_20729                 14354 12 -     67322 -----------------A---------A------TTTA---ACTT--CT
i Hyaena_hyaena.HyaHya_flattened_line_20729             I 15 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           17229 19 -    119109 TTTTC------TT----A---------A------TTTA---ACTT--TG
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       I 4 C 0
s Hylobates_abbotti.k141_493872                              3178  9 +      5897 -----------------------------------TTA---ATTT--TT
i Hylobates_abbotti.k141_493872                         I 5 C 0
s Hylobates_agilis.k141_1485652                              1598  9 -      1697 -----------------------------------TTA---ATTT--TT
i Hylobates_agilis.k141_1485652                         I 5 C 0
s Hylobates_klossii.k141_466549                              9622  9 +     11537 -----------------------------------TTA---ATTT--TT
i Hylobates_klossii.k141_466549                         I 5 C 0
s Hylobates_pileatus_b.ContigUN                                 14622723  9 -  25970782 -----------------------------------TTA---ATTT--TT
i Hylobates_pileatus_b.ContigUN                                I 5 C 0
s Hylobates_muelleri.k141_1133650                            2613  9 -      2775 -----------------------------------TTA---ATTT--TT
i Hylobates_muelleri.k141_1133650                       I 5 C 0
s Hylobates_pileatus_a.tarseq_592                             32110  9 -     60944 -----------------------------------TTA---ATTT--TT
i Hylobates_pileatus_a.tarseq_592                         I 5 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     4355 19 +     22540 TTCTC------TT----A---------A------TTTA---ACTT--GT
i Hystrix_cristata.HysCri_scaffold_50788                I 4 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7124243  8 +  13083262 ttcac------tt----a-------------------------------
i Ictidomys_tridecemlineatus.JH393315.1                 I 4 I 1
s Indri_indri.k141_1884019                                   1441 19 -      2196 TTCAT------TT----A---------A------TTTA---ACTT--TT
i Indri_indri.k141_1884019                              I 4 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               7496 12 +     17520 -----------------A---------A------TTTA---ACTT--AT
i Inia_geoffrensis.IniGeo_flattened_line_66725          I 13 C 0
s Jaculus_jaculus.JH725517.1                              8563767 19 +  11848649 ATCAG------TT----A---------A------TTTA---ACTT--TT
i Jaculus_jaculus.JH725517.1                            I 1 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               22326 12 +     37189 -----------------A---------A------TTTA---ACTT--AT
i Kogia_breviceps.KogBre_flattened_line_35920           I 11 C 0
s Lagothrix_lagothricha.k141_12968                          48216 15 -    147782 CTT--------------A---------A------TTTA---ACTT--TT
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   112225 12 -    115756 -----------------A---------A------TTTA---ACTT--AT
i Lasiurus_borealis.LasBor_scaffold_5102                I 11 I 3
s Lemur_catta.scaffold_1                                258405256 19 - 285822530 TTCAT------TT----A---------A------TTTA---ACTT--TT
i Lemur_catta.scaffold_1                                I 4 C 0
s Lepilemur_ankaranensis.k141_884009                        22125 19 +     39228 TTCAC------TT----A---------A------TTTA---ACTT--TT
i Lepilemur_ankaranensis.k141_884009                    I 4 C 0
s Lepilemur_dorsalis.k141_134267                            51500 19 +     63517 TTCAC------TT----A---------A------TTTA---ACTT--TT
i Lepilemur_dorsalis.k141_134267                        I 4 C 0
s Lepilemur_ruficaudatus.k141_617879                        76744 19 +    116806 TTCAC------TT----A---------A------TTTA---ACTT--TT
i Lepilemur_ruficaudatus.k141_617879                    I 4 C 0
s Lepilemur_septentrionalis.k141_578524                     29764 19 -     33031 TTCAC------TT----A---------A------TTTA---ACTT--TT
i Lepilemur_septentrionalis.k141_578524                 I 4 C 0
s Leptonychotes_weddellii.KB714749.1                      3084051 12 -   3498232 -----------------A---------A------TTTA---actt--at
i Leptonychotes_weddellii.KB714749.1                    I 15 C 0
s Lepus_americanus.LepAme_scaffold_62849                    11231  6 +     22452 ATCAC------T-------------------------------------
i Lepus_americanus.LepAme_scaffold_62849                I 4 I 3
s Lipotes_vexillifer.KE558548.1                            134661 12 +   3060487 -----------------A---------A------TTTA---ACTT--AT
i Lipotes_vexillifer.KE558548.1                         I 11 C 0
s Lophocebus_aterrimus.ctg55                             19245851 23 +  19376315 CTTAC------TC----ACTTA-----A------TTTA---ACTC--TT
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            8856 17 +     84689 TTCGC------TT----A---------A------TGTT---ACTT----
i Loris_lydekkerianus.k141_550999                       I 4 C 0
s Loris_tardigradus.ctg97                                 3776607 17 +   6799190 TTCGC------TT----A---------A------TGTT---ACTT----
i Loris_tardigradus.ctg97                               I 4 C 0
s Loxodonta_africana.GL010040.1                          20590367 19 -  62548349 GCCTC------TT----T---------A------TTTT---GCTT--AT
i Loxodonta_africana.GL010040.1                         I 4 C 0
s Lycaon_pictus.CM007556.1                               11085406 12 +  39895028 -----------------A---------A------TTTA---ACTt--ac
i Lycaon_pictus.CM007556.1                              I 15 C 0
s Macaca_arctoides.k141_2201161                             17534 16 +     74745 ---AC------T-------T-A-----A------TTTA---ACTT--TT
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12704041 19 +  12821369 CTTAC------T-------T-A-----A------TTTA---ACTT--TT
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               6137 19 +      6569 CTTAC------T-------T-A-----A------TTTA---ACTT--TT
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           44439 19 +     63263 CTTAC------T-------T-A-----A------TTTA---ACTT--TT
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_925451                                  447 19 +     10231 CTTAC------T-------T-A-----A------TTTA---ACTT--TT
i Macaca_fuscata.k119_925451                            C 0 C 0
s Macaca_leonina.k141_3421209                                2588 19 +      3017 CTTAC------T-------T-A-----A------TTTA---ACTT--TT
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_mulatta.NC_041755.1                            196033118 19 + 196197964 CTTAC------T-------T-A-----A------TTTA---ACTT--TT
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11443224 19 +  11645122 CTTAC------T-------T-A-----A------TTTA---ACTT--TT
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_radiata.k141_1580474                                2980 19 -      3617 CTTAC------T-------T-A-----A------TTTA---ACTT--TT
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 13310 19 -     55006 CTTAC------T-------T-A-----A------TTTA---ACTT--TT
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43838347 19 +  43892939 CTTAC------T-------T-A-----A------TTTA---ACTT--TT
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                5569 19 -      5978 CTTAC------T-------T-A-----A------TTTA---ACTT--TT
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                700270 12 +    802869 -----------------A---------A------TTTA---ACTT--AT
i Macroglossus_sobrinus.MacSob_scaffold_879             I 11 C 0
s Mandrillus_leucophaeus.scaffold125                     43435013 23 -  43563597 CTTAC------TC----ACTTA-----A------TTTA---ACTT--TT
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4447839 23 -   4543643 CTTAC------TC----ACTTA-----A------TTTA---ACTT--TT
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            144763 12 +    252755 -----------------A---------A------TTTA---ACTT--AA
i Manis_javanica.JSZB01003966.1                         I 11 C 0
s Manis_pentadactyla.KN017078.1                             34838 12 +     58827 -----------------A---------A------TTTA---ACTT--AG
i Manis_pentadactyla.KN017078.1                         I 11 C 0
s Marmota_marmota.CZRN01000005.1                         36872078  8 +  64221397 ttcac------tt----a-------------------------------
i Marmota_marmota.CZRN01000005.1                        I 4 I 1
s Megaderma_lyra.MegLyr_scaffold_3562                       62928  6 -    234502 -----------------A---------A------TTTA-----------
i Megaderma_lyra.MegLyr_scaffold_3562                   I 11 I 1
s Mellivora_capensis.MelCap_flattened_line_146202             644 12 -      1999 -----------------A---------A------TTTA---ACTT--AT
i Mellivora_capensis.MelCap_flattened_line_146202       I 15 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               10183  8 +     15977 ------------------------------------TA---ACTT--TT
i Meriones_unguiculatus.MerUng_scaffold_52233           I 8 C 0
s Mesocricetus_auratus.KB708139.1                         1044972 10 -  26018355 ----------------------------------TTTA---GCTT--TT
i Mesocricetus_auratus.KB708139.1                       I 13 C 0
s Microcebus_murinus.CM007691.1                          16508375  9 +  47401472 ttcat------tt----a---------a---------------------
i Microcebus_murinus.CM007691.1                         I 4 I 5
s Microgale_talazaci.MicTal_scaffold_34660                  29952 19 -     48017 GTCAC------CG----A---------A------TTTA---GCTT--AC
i Microgale_talazaci.MicTal_scaffold_34660              I 4 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               21350 12 -     32043 -----------------A---------A------TTTA---ACTT--AT
i Micronycteris_hirsuta.MicHir_scaffold_37978           I 11 C 0
s Microtus_ochrogaster.CM001673.1                        22818081 19 -  98408828 tgcat------tt----a---------a------ttta---attt--tt
i Microtus_ochrogaster.CM001673.1                       I 4 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8208098 12 +  10048721 -----------------A---------A------TTTA---ACTT--GT
i Miniopterus_natalensis.LDJU01000022.1                 I 11 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            32770 12 +     45743 -----------------A---------A------TTTA---ACTT--GT
i Miniopterus_schreibersii.MinSch_scaffold_24116        I 11 C 0
s Miopithecus_ogouensis.k141_2666161                        33668 23 +     34273 CTTAC------TC----ACTTA-----A------TTTA---ACTT--TT
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         9357 12 -    104932 -----------------A---------A------TTTA---ACTT--AT
i Mirounga_angustirostris.MirAng_flattened_line_8852    I 15 C 0
s Mirza_zaza.k141_226143                                     3775  9 +      8497 TTCAT------TT----A---------A---------------------
i Mirza_zaza.k141_226143                                I 4 I 3
s Monodon_monoceros.MonMon_M_scaffold_5598                 145096 12 +    154973 -----------------A---------A------TTTA---ACTT--AT
i Monodon_monoceros.MonMon_M_scaffold_5598              I 11 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                159856 12 +    265003 -----------------A---------A------TTTA---ACTT--AT
i Mormoops_blainvillei.MorMeg_scaffold_2952             I 11 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 3277 12 -      4346 -----------------A---------A------TTTA---ACTT--AA
i Moschus_moschiferus.MosMos_scaffold_146101            I 11 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  142950 12 -    168139 -----------------A---------A------TTTA---ACTT--CT
i Mungos_mungo.MunMun_flattened_line_8729               I 15 C 0
s Murina_feae.MurFea_scaffold_2254                          17734 12 -    100666 -----------------A---------A------TTTA---ACTT--AT
i Murina_feae.MurFea_scaffold_2254                      I 11 C 0
s Mus_caroli.LT608236.1                                  70764575  8 +  92629107 ------------------------------------ta---actt--tg
i Mus_caroli.LT608236.1                                 I 10 C 0
s Mus_musculus.chr16                                     75487616  8 +  98207768 ------------------------------------ta---actt--tg
i Mus_musculus.chr16                                    I 10 C 0
s Mus_pahari.LT608305.1                                  67553804  8 +  89017189 ------------------------------------ta---actt--tG
i Mus_pahari.LT608305.1                                 I 10 C 0
s Mus_spretus.CM004110.1                                 74328797  8 +  97876770 ------------------------------------ta---actt--tg
i Mus_spretus.CM004110.1                                I 14 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              9359  7 +     98495 -TCAC------TT----A-------------------------------
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 3 I 1
s Mustela_putorius.JH417978.1                             4422216 12 -  28371801 -----------------A---------A------TTTA---actt--at
i Mustela_putorius.JH417978.1                           I 15 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     88282 10 -    117718 ----------------------------------TTTA---ATTT--GG
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 12 C 0
s Myotis_brandtii.KE161952.1                               966060 12 +   8389877 -----------------A---------A------TTTA---ACTT--AT
i Myotis_brandtii.KE161952.1                            I 11 C 0
s Myotis_davidii.KB114863.1                               5017749 12 +   6462685 -----------------A---------A------TTTA---ACTT--AT
i Myotis_davidii.KB114863.1                             I 10 C 0
s Myotis_lucifugus.GL429887.1                             3463646 12 -   3747815 -----------------A---------A------TTTA---ACTT--AT
i Myotis_lucifugus.GL429887.1                           I 10 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         8840 12 +     66751 -----------------A---------A------TTTA---ACTT--AT
i Myotis_myotis.MyoMyo_scaffold_6123                    I 10 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3715 19 -      8794 TTCAC------TT----A---------A------TTTA---GCTT--AT
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        I 4 C 0
s Nannospalax_galili.KL201303.1                            108691 22 +    362372 ttcat------tt----a---------a------tttatttacta--aA
i Nannospalax_galili.KL201303.1                         I 4 C 0
s Nasalis_larvatus.k141_153429                               6047 19 +     48152 CTTAC------T-------T-A-----A------TTTA---ACTT--TT
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4482951 12 -  14209539 -----------------A---------A------TTTa---actt--at
i Neomonachus_schauinslandi.NINY01007774.1              I 15 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3949709 12 -   4490290 -----------------A---------A------TTTA---ACTT--AT
i Neophocaena_asiaeorientalis.KZ688543.1                I 11 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  47963 12 +     94413 -----------------A---------A------TTTA---CTTT--AT
i Noctilio_leporinus.NocLep_scaffold_12062              I 11 C 0
s Nomascus_annamensis.k141_302224                              27  9 +      1516 -----------------------------------TTA---ATTT--TT
i Nomascus_annamensis.k141_302224                       I 5 C 0
s Nomascus_concolor.k141_49591                               1148  9 +      2014 -----------------------------------TTA---ATTT--TT
i Nomascus_concolor.k141_49591                          I 5 C 0
s Nomascus_gabriellae.k141_642452                              73  9 +      2851 -----------------------------------TTA---ATTT--TT
i Nomascus_gabriellae.k141_642452                       I 5 C 0
s Nomascus_siki_b.tarseq_80                             22952  9 -  18771707 -----------------------------------TTA---ATTT--TT
i Nomascus_siki_b.tarseq_80                         I 5 C 0
s Nomascus_siki_a.k141_595747                                   701  9 +      4512 -----------------------------------TTA---ATTT--TT
i Nomascus_siki_a.k141_595747                             I 5 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                28399 12 +   3668941 -----------------A---------A------TTTA---ACtt--ac
i Nyctereutes_procyonoides.CAJHUB010000786.1            I 15 C 0
s Nycticebus_bengalensis.LG16                            65565495 17 -  95554990 TTCGC------TT----A---------A------TGTT---ACTT----
i Nycticebus_bengalensis.LG16                           I 4 C 0
s Nycticebus_coucang.k141_2051882                            2223 17 +      6470 TTCGC------TT----A---------A------TGTT---ACTT----
i Nycticebus_coucang.k141_2051882                       I 4 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65667843 17 +  89412551 TTTGC------TT----C---------A------TGTT---ACCT----
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     I 4 C 0
s Ochotona_princeps.JH802095.1                            4994211  6 -  23139505 ATCGC------T-------------------------------------
i Ochotona_princeps.JH802095.1                          I 4 I 4
s Octodon_degus.JH651621.1                                3683765 19 +  10294119 TTCTC------TT----A---------A------TTTA---actt--tc
i Octodon_degus.JH651621.1                              I 4 C 0
s Odobenus_rosmarus.KB229369.1                             677601 12 -   3126709 -----------------A---------A------TTTA---actt--at
i Odobenus_rosmarus.KB229369.1                          I 15 C 0
s Odocoileus_virginianus.KZ101650.1                       1078405 12 +   1425656 -----------------A---------A------TTTA---ACTT--AC
i Odocoileus_virginianus.KZ101650.1                     I 11 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         35700 12 +     78940 -----------------A---------A------TTTA---ACTT--AC
i Okapia_johnstoni.LVCL01S0017931.1                     I 11 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  123359  9 +    145789 -----------------------------------TTA---ACTC--TT
i Ondatra_zibethicus.OndZib_scaffold_6821               I 9 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  35110 18 +     62360 TACAT------TT----A---------A------TTTA---A-TT--TT
i Onychomys_torridus.OnyTor_scaffold_12578              I 4 C 0
s Orcinus_orca.KB316965.1                                 7223393 12 -   7562323 -----------------A---------A------TTTA---ACTT--AT
i Orcinus_orca.KB316965.1                               I 11 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              42304 19 -     66828 ATCAT------TT----A---------A------TTTA---GTTT--AT
i Orycteropus_afer.OryAfe_flattened_line_13509          I 4 C 0
s Oryctolagus_cuniculus.CM000803.1                      141873890 11 + 163896628 ATCACTTAA-CT-------------------------------------
i Oryctolagus_cuniculus.CM000803.1                      I 4 I 3
s Otocyon_megalotis.JAEUCK010005121.1                      305737 12 -    505867 -----------------A---------A------TTTA---ACTT--AC
i Otocyon_megalotis.JAEUCK010005121.1                   I 15 C 0
s Otolemur_crassicaudatus.k141_321880                       37198 19 +     38679 TTCAC------TT----A---------G------TTTT---ACTT--TT
i Otolemur_crassicaudatus.k141_321880                   I 4 C 0
s Otolemur_garnettii.GL873528.1                          18006640 19 -  38779656 TTCAC------TT----A---------G------TTTT---ACTT--TT
i Otolemur_garnettii.GL873528.1                         I 4 C 0
s Ovis_aries.CM001582.2                                 134075967 12 - 275406953 -----------------A---------A------TTTA---ACTT--AC
i Ovis_aries.CM001582.2                                 I 11 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      77181 12 +    140051 -----------------A---------A------TTTA---ACTT--AC
i Ovis_canadensis.OviCan_scaffold_6251                  I 11 C 0
s Pan_paniscus.CM003386.1                               127572696 23 - 205426864 cttAC------TCACTTA---------A------TTTA---ACTT--TT
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120149849 23 - 196562556 cTTAC------TCACTTA---------A------TTTA---ACTT--TT
i Pan_troglodytes.CM009241.2                            I 17 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  32414 12 +    295523 -----------------A---------A------TTTA---ACTT--CT
i Panthera_onca.PanOnc_flattened_line_1615              I 15 C 0
s Panthera_pardus.KV860323.1                              3636148 12 +  18214204 -----------------A---------A------TTTA---actt--ct
i Panthera_pardus.KV860323.1                            I 15 C 0
s Panthera_tigris.KE721879.1                              5025795 12 -   6340057 -----------------A---------A------TTTA---actt--ct
i Panthera_tigris.KE721879.1                            I 15 C 0
s Pantholops_hodgsonii.KE114631.1                         1064828 12 -   1292953 -----------------A---------A------TTTA---ACTT--AC
i Pantholops_hodgsonii.KE114631.1                       I 11 C 0
s Papio_anubis.CM001492.2                               188153795 23 - 188283584 CTTAC------TC----ACTTA-----A------TTTA---ACTT--TT
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            50007 23 +     76494 CTTAC------TC----ACTTA-----A------TTTA---ACTT--TT
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47511192 23 +  47705337 CTTAC------TC----ACTTA-----A------TTTA---ACTT--TT
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 65169 23 -    104429 CTTAC------TC----ACTTA-----A------TTTA---ACTT--TT
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  14960 23 -     29451 CTTAC------TC----ACTTA-----A------TTTA---ACTT--TT
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                35363 23 +     35859 CTTAC------TC----ACTTA-----A------TTTA---ACTT--TT
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113711 12 -    135482 -----------------A---------A------TTTA---ACTT--CT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 I 15 C 0
s Perodicticus_ibeanus.k141_117958                           3249 17 -     23713 TTCAC------TT----A---------A------TGTT---ACTT----
i Perodicticus_ibeanus.k141_117958                      I 4 C 0
s Perodicticus_potto.k141_713187                            22547 17 -     27972 TTCAC------TT----A---------A------TGTT---ACTT----
i Perodicticus_potto.k141_713187                        I 4 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      41124  7 -     45160 -------------------------------------A---ATTT--TT
i Perognathus_longimembris.PerPac_flattened_line_22291  I 12 C 0
s Peromyscus_maniculatus.KI615518.1                       4948290 19 -   8017169 tacat------tt----a---------a------atta---actt--tt
i Peromyscus_maniculatus.KI615518.1                     I 4 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    10459 19 -     36578 TTCTC------TC----A---------A------TTTA---CCTT--TT
i Petromus_typicus.PetTyp_scaffold_33007                I 4 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            120010 12 -    122454 -----------------A---------A------TTTA---ACTT--AT
i Phocoena_phocoena.PhoPho_flattened_line_11948         I 11 C 0
s Piliocolobus_badius.k141_1497351                           3053 19 -      3310 CTT--------------ACTTA-----A------TTTA---ACTT--TT
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       22958 19 -     82327 CTT--------------ACTTA-----A------TTTA---ACTT--TT
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           19705 19 +     19957 CTT--------------ACTTA-----A------TTTA---ACTT--TT
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26737719 19 +  26888534 CTT--------------ACTTA-----A------TTTA---ACTT--TT
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            95503 12 +    112873 -----------------A---------A------TTTA---ACTT--AT
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        I 6 C 0
s Pithecia_albicans.k141_991845                             41697 19 -     61926 CTTAC------TT----A---------A------TTTA---ACTT--TC
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        23126 19 +     78826 CTTAC------TT----A---------A------TTTA---ACTT--TC
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              7077 19 -     15800 CTTAC------TT----A---------A------TTTA---ACTT--TC
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        10275 19 -     16101 CTTAC------TT----A---------A------TTTA---ACTT--TC
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          3584 19 +      9673 CTTAC------TT----A---------A------TTTA---ACTT--TC
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13472578 19 -  19735023 CTTAC------TT----A---------A------TTTA---ACTT--TC
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           11486 19 -     31692 CTTAC------TT----A---------A------TTTA---ACTT--TC
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           4076 12 +     21690 -----------------A---------T------TTTA---ACTT--AT
i Platanista_gangetica.PlaMin_flattened_line_72990      I 11 C 0
s Plecturocebus_bernhardi.k141_959214                       20922 19 +     44506 CTTAC------TT----A---------A------TTTA---ACTT--TC
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        21132 19 +     67491 CTTAC------TT----A---------A------TTTA---ACTT--TC
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      11373 19 -     98129 CTTAC------TT----A---------A------TTTA---ACTT--TC
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     20978 19 +    147771 CTTAC------TT----A---------A------TTTA---ACTT--TC
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        21227 19 -     23762 TTTAC------TT----A---------A------TTTA---ACTT--TC
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          1694 19 -     55515 CTTAC------TT----A---------A------TTTA---ACTT--TC
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         21047 19 +    152463 CTTAC------TT----A---------A------TTTA---ACTT--TC
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      7807 19 +      8943 CTTAC------TT----A---------A------TTTA---ACTT--TC
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                         10767 19 +    134592 CTTAC------TT----A---------A------TTTA---ACTT--TC
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          21357 19 -     75465 CTTAC------TT----A---------A------TTTA---ACTT--TC
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              185244 19 -    373494 cttaC------TC----A---------A------TTTA---ACTT--TT
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19805152 19 +  19899266 CTTAC------TC----A---------A------TTTA---ACTT--TT
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               3287 23 -     15069 CTTAC------TC----ACTTA-----A------CTTA---ACTT--TT
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              3421 23 +     14865 CTTAC------TC----ACTTA-----A------CTTA---ACTT--TT
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                75592 19 +     78963 GCCAC------TG----A---------A------TCTT---ATTT--AT
i Procavia_capensis.ProCapCap_scaffold_15315            I 4 C 0
s Prolemur_simus.MPIZ01000048.1                           6846632 19 +  12164890 ttcat------tt----a---------a------ttta---actt--tt
i Prolemur_simus.MPIZ01000048.1                         I 4 C 0
s Propithecus_coquerelli.NW_012147997.1                    665250 19 -   2312742 NNNNN------NN----N---------N------NNNN---NNNN--NN
i Propithecus_coquerelli.NW_012147997.1                 I 4 I 695
s Propithecus_coronatus.k141_1353159                         1775 19 +     11805 TTCAT------TT----A---------A------TTTA---ACTT--TT
i Propithecus_coronatus.k141_1353159                    I 4 C 0
s Propithecus_diadema.k141_577245                           41110 19 +     52369 TTCAT------TT----A---------A------TTTA---ACTT--TT
i Propithecus_diadema.k141_577245                       I 4 C 0
s Propithecus_edwardsi.k141_1317105                         33499 19 -     44753 TTCAT------TT----A---------A------TTTA---ACTT--TT
i Propithecus_edwardsi.k141_1317105                     I 4 C 0
s Propithecus_perrieri.k141_7554                            15420 19 +     27322 TTCAT------TT----A---------A------TTTA---ACTT--TT
i Propithecus_perrieri.k141_7554                        I 4 C 0
s Propithecus_tattersalli.k141_907138                       15059 19 -     53241 TTCAT------TT----A---------A------TTTA---ACTT--TT
i Propithecus_tattersalli.k141_907138                   I 4 C 0
s Propithecus_verreauxi.k141_158021                         37330 19 -     48185 TTCAT------TT----A---------A------TTTA---ACTT--TT
i Propithecus_verreauxi.k141_158021                     I 4 C 0
s Psammomys_obesus.NESX01026517.1                           31723  8 +     77221 ------------------------------------TA---ACTT--TT
i Psammomys_obesus.NESX01026517.1                       I 8 C 0
s Pteronotus_parnellii.KE867983.1                            2525 12 -     27784 -----------------a---------a------ttta---actt--at
i Pteronotus_parnellii.KE867983.1                       I 11 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        244310 12 -    344369 -----------------A---------A------TTTA---ACTT--AT
i Pteronura_brasiliensis.PteBra_flattened_line_1343     I 15 C 0
s Pteropus_alecto.KB031157.1                             13244655 12 -  17261082 -----------------A---------A------TTTA---ACTT--AT
i Pteropus_alecto.KB031157.1                            I 11 C 0
s Pteropus_vampyrus.KN525959.1                             602605 12 -   3946241 -----------------A---------A------TTTA---ACTT--AT
i Pteropus_vampyrus.KN525959.1                          I 11 C 0
s Puma_concolor.QAVW01000427.1                          131532377 12 - 161321710 -----------------A---------A------TTTa---actt--ct
i Puma_concolor.QAVW01000427.1                          I 15 C 0
s Pygathrix_cinerea.k141_374971                             27416 19 +     56732 CTTAC------T-------T-A-----A------TTTA---ACTT--TT
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6803907 19 +   6970761 CTTAC------T-------T-A-----A------TTTA---ACTT--TT
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             3300 19 +     18040 CTTAC------T-------T-A-----A------TTTA---ACTT--TT
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                14482 12 +     68503 -----------------A---------A------TTTA---ACTT--AC
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 11 C 0
s Rattus_norvegicus.chr11                                13913670  8 +  90463843 ------------------------------------TA---ACTT--TT
i Rattus_norvegicus.chr11                               I 10 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1786469 12 +   2252614 -----------------A---------A------TTTA---ACTT--AT
i Rhinolophus_sinicus.LVEH01000179.1                    I 11 C 0
s Rhinopithecus_bieti.k119_102124                           13853 19 -     14454 CTTAC------T-------T-A-----A------TTTA---ACTT--TT
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206375179 19 - 206558726 CTTAC------T-------T-A-----A------TTTA---ACTT--TT
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44854079 19 -  45163003 CTTAC------T-------T-A-----A------TTTA---ACTT--TT
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                17945 12 +    109198 -----------------A---------A------TTTA---ATTT--AT
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            I 11 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       6284 12 +     12214 -----------------A---------A------TTTA---ATTT--AC
i Saiga_tatarica.SaiTat_scaffold_82192                  I 11 C 0
s Saimiri_boliviensis.NW_024100938.1                     15670800 15 -  43202129 CTT--------------A---------A------TTTA---ACTT--TC
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        2666 15 +     34089 CTT--------------A---------A------TTTA---ACTT--TC
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              2607 15 -     60842 CTT--------------A---------A------TTTA---ACTT--TC
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              2702 15 +     67014 CTT--------------A---------A------TTTA---ACTT--TC
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              2680 15 +     60816 CTT--------------A---------A------TTTA---ACTT--TC
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 2617 15 -     76454 CTT--------------A---------A------TTTA---ACTT--TC
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17339369 19 -  30362882 CTT--------------ACTTA-----A------TTTA---ACTT--TT
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         18744 19 -     62485 CTT--------------ACTTA-----A------TTTA---ACTT--TT
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   30038 11 -    114521 -----------------T---------T-------CTA---ACTT--AT
i Scalopus_aquaticus.ScaAqu_scaffold_9300               I 4 C 0
s Semnopithecus_entellus.k141_1527475                       25839 23 +     26421 CTTAC------TC----ACTTA-----A------TTTA---ACTT--TT
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       6299 23 +     20762 CTTAC------TC----ACTTA-----A------TTTA---ACTT--TT
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         40034 23 +     40653 CTTAC------TC----ACTTA-----A------TTTA---ACTT--TT
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                           10591 23 -     12194 CTTAC------TC----ACTTA-----A------TTTA---ACTT--TT
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     24013 23 -     27512 CTTAC------TC----ACTTA-----A------TTTA---ACTT--TT
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         33032 19 -     33692 CTTAC------T-------T-A-----A------TTTA---ACTT--TT
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   97886 19 -    120886 TTCTT------TT----A---------A------TTTA---ACTG--TT
i Sigmodon_hispidus.SigHis_scaffold_11332               I 4 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            16661 12 +    739146 -----------------A---------A------AAAA---ACTT--AT
i Solenodon_paradoxus.SolPar_flattened_line_1012        I 4 C 0
s Spermophilus_dauricus.KZ294190.1                        2238159  8 +   2842873 tacac------tt----a-------------------------------
i Spermophilus_dauricus.KZ294190.1                      I 4 I 1
s Spilogale_gracilis.SpiGra_flattened_line_905             233062 12 -    276980 -----------------A---------A------TTTA---ACTT--AT
i Spilogale_gracilis.SpiGra_flattened_line_905          I 15 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            25616 12 +     62062 -----------------A---------A------TTTA---ACTT--CT
i Suricata_suricatta.SurSur_flattened_line_20339        I 15 C 0
s Sus_scrofa.CM000824.4                                 189270530 12 + 218635234 -----------------t---------a------atga---attt--at
i Sus_scrofa.CM000824.4                                 I 6 C 0
s Symphalangus_syndactylus.tarseq_24                        12980  9 -  13920577 -----------------------------------TTA---ATTT--TT
i Symphalangus_syndactylus.tarseq_24                    I 5 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               4471 12 -      6213 -----------------A---------A------TCTA---ACTT--AT
i Tadarida_brasiliensis.TadBra_scaffold_145589          I 28 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               13391 19 +     45698 TTCAC------TT----A---------A------TTTA---GTTT--AT
i Tamandua_tetradactyla.TamTet_scaffold_26877           I 4 C 0
s Tapirus_indicus.TapInd_scaffold_176                      805395 12 +   1148477 -----------------A---------A------TTTA---ACTT--AT
i Tapirus_indicus.TapInd_scaffold_176                   I 11 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  56055 12 +     99546 -----------------A---------A------TTTA---ACTT--AT
i Tapirus_terrestris.TapTer_scaffold_14939              I 11 C 0
s Tarsius_lariang.k141_609102                               24689 19 +     42269 TTCAT------TT----A---------A------TTTA---ACTT--TT
i Tarsius_lariang.k141_609102                           I 4 C 0
s Tarsius_wallacei.k141_48636                               58005 19 +     65473 TTCAT------TT----A---------A------TTTA---ACTT--TT
i Tarsius_wallacei.k141_48636                           I 4 C 0
s Theropithecus_gelada.CM009951.1                       194005331 23 - 194193292 CTTAC------TC----ACTTA-----A------TTTA---ACTT--TT
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             37520 19 -     47444 TTCTC------TC----A---------A------TTTA---ACTT--TT
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         I 4 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  2823  8 +      6782 ------------------------------------TA---GCTT--AT
i Tolypeutes_matacus.TolMat_scaffold_269431             I 7 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  134534 12 -    259118 -----------------A---------A------TTTA---ACTC--AT
i Tonatia_saurophila.TonSau_scaffold_3334               I 11 C 0
s Trachypithecus_auratus.k141_738098                        24409 23 +     38948 CTTAC------TC----ACTTA-----A------TTTA---ACTT--TT
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   18136 23 -     32910 CTTAC------TC----ACTTA-----A------TTTA---ACTT--TT
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       24034 23 +     24652 CTTAC------TC----ACTTA-----A------TTTA---ACTT--TT
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      2912 23 -      3559 CTTAC------TC----ACTTA-----A------TTTA---ACTT--TT
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           40856 23 -     54611 CTTAC------TC----ACTTA-----A------TTTA---ACTT--TT
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       16857 23 +     17312 CTTAC------TC----ACTTA-----A------TTTA---ACTT--TT
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    24220 23 -     25040 CTTAC------TC----ACTTA-----A------TTTA---ACTT--TT
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          2881 23 +      3528 CTTAC------TC----ACTTA-----A------TTTA---ACTT--TT
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  49248 23 +     51589 CTTAC------TC----ACTTA-----A------TTTA---ACTT--TT
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       12424 23 +     14732 CTTAC------TC----ACTTA-----A------TTTA---ACTT--TT
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       2901 23 -     28054 CTTAC------TC----ACTTA-----A------TTTA---ACTT--TT
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44657696 23 -  44834318 CTTAC------TC----ACTTA-----A------TTTA---ACTT--TT
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        2705 23 +      3372 CTTAC------TC----ACTTA-----A------TTTA---ACTT--TT
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   3874  8 +     90398 ------------------------------------TA---ACTT--AC
i Tragulus_javanicus.TraJav_scaffold_14717              I 5 C 0
s Trichechus_manatus.JH594618.1                          16080816 19 +  31416278 GTCCC------TT----A---------A------TTTT---GCTT--AT
i Trichechus_manatus.JH594618.1                         I 4 C 0
s Tupaia_chinensis.KB320831.1                             2790618 14 -   3938065 TTCAC------TT----A---------A------tgtc---a-------
i Tupaia_chinensis.KB320831.1                           I 4 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    3142 14 +     13056 TTCAC------TT----A---------A------TGTC---A-------
i Tupaia_tana.TupTan_flattened_line_68454               I 4 C 0
s Tursiops_truncatus.MRVK01000923.1                      69312110 12 -  96451834 -----------------A---------A------TTTA---ACTT--AT
i Tursiops_truncatus.MRVK01000923.1                     I 11 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 25231 11 -     25548 -----------------A---------T-------TTA---ACTT--AC
i Uropsilus_gracilis.UroGra_scaffold_4143_0             I 4 I 3
s Ursus_maritimus.KK498671.1                              6512866 14 +  28682327 -----------------A---------A------cttat-gattt--tg
i Ursus_maritimus.KK498671.1                            I 15 C 0
s Varecia_rubra.k141_432109                                  3476 19 -     20643 TTCAT------TT----A---------A------TTTA---ACTT--TT
i Varecia_rubra.k141_432109                             I 4 C 0
s Varecia_variegata.k141_775891                             23018 19 -     33872 TTCAT------TT----A---------A------TTTA---ACTT--TT
i Varecia_variegata.k141_775891                         I 4 C 0
s Vicugna_pacos.KN269600.1                                1523335 12 -   2331223 -----------------C---------A------AGCA---ACTT--AT
i Vicugna_pacos.KN269600.1                              I 6 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                135806 12 -    281493 -----------------A---------A------TTTA---ACTT--AC
i Vulpes_lagopus.VulLag_flattened_line_2045             I 15 C 0
s Xerus_inauris.XerIna_scaffold_7898                       125250  8 -    134049 TTCAC------TT----A-------------------------------
i Xerus_inauris.XerIna_scaffold_7898                    I 4 I 1
s Zalophus_californianus.ZalCal_flattened_line_4097        212336 12 -    227762 -----------------A---------A------TTTA---ACTT--AT
i Zalophus_californianus.ZalCal_flattened_line_4097     I 15 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     13476 21 -     20485 TTCAG------CT----A---AA----A------TTTA---ACTT--TT
i Zapus_hudsonius.ZapHud_scaffold_64392                 I 1 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           5607 12 -      8775 -----------------A---------A------TTTA---ACTT--AT
i Ziphius_cavirostris.ZipCav_flattened_line_127025      I 11 C 0
e Sorex_araneus.JH798170.1                               17748817 583 -  27805282 I
e Chrysochloris_asiatica.ChrAsi_scaffold_141308              7105 1700 -     12508 I
e Mesoplodon_bidens.MesBid_scaffold_183284                   2166 255 +      2166 T
e Elephantulus_edwardii.JH947210.1                        7805376  0 +  15467074 C
e Macaca_tonkeana.k141_2870633                               2864 158 -     27140 T
e Macaca_nigra.k141_282495                                   2859 158 -     46448 T
e Macaca_maura.k141_251854                                  43912 158 -     79256 T

a score=0.000000
s hg38.chr4_GL000008v2_random                                9977 12 +    209709 G-TT--A-AA------G----TA--CTT
s Acinonyx_jubatus.LLWD01000356.1                         2032048 12 +   3721120 g-at--t-tt------a----ta--ttt
i Acinonyx_jubatus.LLWD01000356.1                       C 0 I 1
s Acomys_cahirinus.AcoCah_scaffold_1625                    110721 12 -    189883 G-TA--T-TT------A----TA--TTC
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 I 1
s Ailuropoda_melanoleuca.LNAT01000321.1                  10655393 12 +  23371972 G-AT--T-TT------G----TA--TTT
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 I 1
s Ailurus_fulgens.LNAC01000003.1                          7092318 12 -  16596857 g-at--t-tt------a----ta--ttt
i Ailurus_fulgens.LNAC01000003.1                        C 0 I 1
s Allactaga_bullata.AllBul_scaffold_70162                   11033 12 -     22067 G-TA--T-TT------G----GA--CTT
i Allactaga_bullata.AllBul_scaffold_70162               C 0 I 1
s Allenopithecus_nigroviridis.k141_3103707                  60990 12 +     61638 G-TT--A-AT------G----TA--CTT
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        52802 12 +     53391 G-TT--A-AT------G----TA--CTT
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         3527 12 +     72529 G-TT--A-AT------G----TA--CTT
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          3102 12 +      3797 G-TT--A-AT------G----TA--CTT
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             8268 12 -     18050 G-TT--A-AT------G----TA--CTT
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  9381 12 -     11521 G-TT--A-AT------G----TA--CTT
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              8945 12 -     21359 G-TT--A-AT------G----TA--CTT
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_298055                                  236 12 +      1823 G-TT--A-AT------G----TA--CTT
i Alouatta_juara.k141_298055                            C 0 C 0
s Alouatta_macconnelli.k141_1331706                          8236 12 -     10438 G-TT--A-AT------G----TA--CTT
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            4892 12 +      7047 G-TT--A-AT------G----TA--CTT
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             8178 12 +     10410 G-TT--A-AT------G----TA--CTT
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            1981 12 -      4927 G-TT--A-AT------G----TA--CTT
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             4911 12 +      6429 G-TT--A-AT------G----TA--CTT
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3518838 12 +   4113121 A-AT--T-TT------G----TA--CTT
i Ammotragus_lervia.NIVO01013474.1                      C 0 I 1
s Anoura_caudifer.AnoCau_scaffold_422                      388983 12 -    631301 G-AT--T-TT------C----TG--CTT
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 I 1
s Antilocapra_americana.AntAmePen_scaffold_42841            29419 12 +     33004 A-CT--T-TT------A----TA--CTT
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 I 1
s Aotus_azarae.k141_3170768                                 60629 12 +     78111 G-TG--A-AT------G----TA--CTT
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            3570 12 +     22701 G-TG--A-AT------G----TA--CTT
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5747527 12 +   9889416 g-tg--a-at------g----ta--ctt
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             4112 12 -    104377 G-TG--A-AT------G----TA--CTT
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               4118 12 +     23246 G-TG--A-AT------G----TA--CTT
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     2126 12 +      5067 G-TT--T-TC------A----TG--TTT
i Aplodontia_rufa.AprRuf_scaffold_156013                I 1 I 1
s Arctocebus_calabarensis.k141_1161114                      16065 11 +     17483 --TA--C-AG------G----TA--CTT
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 7381 12 -     29036 A-AT--T-TT------C----TG--CTC
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 I 1
s Ateles_geoffroyi_b.tarseq_2582                             9537362 12 +  39197703 G-TT--A-AT------G----CA--GTT
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             58646 12 +     85812 A-TT--A-AT------G----CA--GTT
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 9645 12 +     89302 A-TT--A-AT------G----CA--GTT
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             14150 12 -     58268 G-TT--A-AT------G----CA--GTT
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             62141 12 +    119057 A-TT--A-AT------G----CA--GTT
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               4110 12 -     25888 G-TT--A-AT------G----CA--GTT
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 4868 12 -     16375 A-GT--G-GT------G----TA--CTT
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              1187 12 +      2719 A-GT--G-GT------G----TA--CTT
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26378839 12 +  51448160 A-AT--T-TT------G----TA--CTT
i Balaenoptera_acutorostrata.KI537095.1                 C 0 I 1
s Balaenoptera_bonaerensis.DF502048.1                        4071 12 -     13118 A-AT--T-TT------G----TA--CTT
i Balaenoptera_bonaerensis.DF502048.1                   C 0 I 1
s Beatragus_hunteri.BeaHun_scaffold_21644                   41900 12 -     72089 A-AT--T-TT------G----TA--CTT
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 I 1
s Bison_bison.KN264915.1                                  6557931 12 +   6870073 A-AT--T-TT------G----TA--CTT
i Bison_bison.KN264915.1                                C 0 I 1
s Bos_indicus.CM003021.1                                138138170 12 - 161108492 A-AT--T-TT------G----TA--CTT
i Bos_indicus.CM003021.1                                C 0 I 1
s Bos_mutus.JH883513.1                                     570544 12 -    998990 A-AT--T-TT------G----TA--CTT
i Bos_mutus.JH883513.1                                  C 0 I 1
s Bos_taurus.CM000177.6                                 136293903 12 - 158972876 A-AT--T-TT------G----TA--CTT
i Bos_taurus.CM000177.6                                 C 0 I 1
s Bubalus_bubalis.KI419065.1                              1229658 12 -   1914593 A-AT--T-TT------G----TA--CTT
i Bubalus_bubalis.KI419065.1                            C 0 I 1
s Cacajao_ayresi.k141_724503                               112002 12 -    171031 G-TT--A-AT------G----TA--CTT
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 11028 12 +    125063 G-TT--A-AT------G----TA--CTT
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                13076 12 -    216513 G-TT--A-AT------G----TA--CTT
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        5616 12 -    134917 G-TT--A-AT------G----TA--CTT
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3218238 12 -   8989139 G-AT--T-TT------G----TA--CTT
i Camelus_bactrianus.KN276303.1                         C 0 I 1
s Camelus_dromedarius.KN271192.1                           395943 12 -  15254737 G-AT--T-TT------G----TA--CTT
i Camelus_dromedarius.KN271192.1                        C 0 I 1
s Camelus_ferus.KB016973.1                                2971676 12 +   6889770 G-AT--T-TT------G----TA--CTT
i Camelus_ferus.KB016973.1                              C 0 I 1
s CanFam4.chr31                                          11516772 12 +  39901454 A-AT--T-TT------G----TA--TTT
i CanFam4.chr31                                         C 0 I 1
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   11790 12 +     87036 A-AT--T-TT------G----TA--TTT
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 I 1
s Canis_lupus_dingo.QKWQ01001993.1                       11263433 12 -  35597290 A-AT--T-TT------G----TA--TTT
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 I 1
s Canis_lupus_familiaris.chr31                           11085962 12 +  39895921 A-AT--T-TT------G----TA--TTT
i Canis_lupus_familiaris.chr31                          C 0 I 1
s Canis_lupus_orion.HG994411.1                           16452986 12 -  44759192 A-AT--T-TT------G----TA--TTT
i Canis_lupus_orion.HG994411.1                          C 0 I 1
s Capra_aegagrus.CM003214.1                              21323914 12 + 157394656 A-AT--T-TT------G----TA--CTT
i Capra_aegagrus.CM003214.1                             C 0 I 1
s Capra_hircus.CM004562.1                               135705141 12 - 157403528 A-AT--T-TT------G----TA--CTT
i Capra_hircus.CM004562.1                               C 0 I 1
s Capromys_pilorides.CapPil_scaffold_979108                   224 12 -      1248 G-TT--T-TA------G----TA--TTT
i Capromys_pilorides.CapPil_scaffold_979108             C 0 I 2
s Carlito_syrichta.NW_007248099.1                          307225 12 +    345090 G-TT--T-AG------G----TA--TTT
i Carlito_syrichta.NW_007248099.1                       C 0 I 1
s Carollia_perspicillata.CarPer_scaffold_4436               58177 12 +     67245 G-AT--T-TT------G----TG--CTT
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 I 1
s Castor_canadensis.CasCan_scaffold_47037                   28669 12 +     33760 G-AC--T-TT------G----TA--CTT
i Castor_canadensis.CasCan_scaffold_47037               C 0 I 1
s Catagonus_wagneri.CatWag_scaffold_1305                   157445 12 -    276539 G-AT--T-TT------G----GT--CTT
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 I 1
s Cavia_aperea.AVPZ01000278.1                            15784827 12 -  24422027 A-CT--T-TT------A----TA--CTT
i Cavia_aperea.AVPZ01000278.1                           C 0 I 2
s Cavia_porcellus.DS562889.1                             15796761 12 -  24440124 A-CT--t-tt------a----ta--ctt
i Cavia_porcellus.DS562889.1                            C 0 I 2
s Cavia_tschudii.CavTsc_scaffold_488                       174952 12 +    436027 A-CT--T-TT------A----TA--CTT
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 I 2
s Cebus_albifrons.Contig22                               18888860 12 -  29618158 G-TT--A-AT------G----TA--CTT
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 6404 12 -     26817 G-TT--A-AT------G----TA--CTT
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                10644 12 +     25043 G-TT--A-AT------G----TA--CTT
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         6258 12 +     21754 G-TT--T-AA------G----TA--TTT
i Cephalopachus_bancanus.k141_702587                    C 0 I 1
s Ceratotherium_simum.JH767818.1                          4362555 12 +   7569818 G-AT--T-TT------G----TG--ATT
i Ceratotherium_simum.JH767818.1                        C 0 I 1
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         2307 12 -      9338 G-AT--T-TT------G----TG--ATT
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 I 1
s Cercocebus_atys.KQ010443.1                              6552786 12 +   6739814 G-TT--A-AT------G----TA--CTT
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      54263 12 -     54931 G-TT--A-AT------G----TA--CTT
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         19247 12 -     19697 G-TT--A-AT------G----TA--CTT
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         56778 12 -    107033 G-TT--A-AT------G----TA--CTT
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        3218 12 -      3853 G-TT--A-AT------G----TA--CTT
i Cercopithecus_ascanius.k141_3371259                   I 5 C 0
s Cercopithecus_cephus.k141_598190                          27149 12 +     30494 G-TT--A-AT------G----TA--CTT
i Cercopithecus_cephus.k141_598190                      I 5 C 0
s Cercopithecus_diana.k141_1490386                           3178 12 -      4022 G-TT--A-AT------G----TA--CTT
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          3067 12 -      3505 G-TT--A-AT------G----TA--CTT
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           21855 12 +     35983 G-TT--A-AT------G----TA--CTT
i Cercopithecus_lowei.k141_623764                       I 5 C 0
s Cercopithecus_albogularis.ctg51                              11988392 12 +  12117833 G-TT--A-AT------G----TA--CTT
i Cercopithecus_albogularis.ctg51                             I 5 C 0
s Cercopithecus_mona.ctg12                               46475145 12 +  46592721 G-TT--A-AT------G----TA--CTT
i Cercopithecus_mona.ctg12                              I 5 C 0
s Cercopithecus_neglectus.k141_1474992                      32974 12 +     33420 G-TT--A-AT------G----TA--CTT
i Cercopithecus_neglectus.k141_1474992                  I 5 C 0
s Cercopithecus_nictitans.k141_675209                        3008 12 -      3443 G-TT--A-AT------G----TA--CTT
i Cercopithecus_nictitans.k141_675209                   I 5 C 0
s Cercopithecus_petaurista.k141_2037881                      4006 12 -      4669 G-TT--A-AT------G----TA--CTT
i Cercopithecus_petaurista.k141_2037881                 I 5 C 0
s Cercopithecus_pogonias.k141_1977419                        3794 12 -      4411 G-TT--A-AT------G----TA--CTT
i Cercopithecus_pogonias.k141_1977419                   I 5 C 0
s Cercopithecus_roloway.k141_3372345                         3329 12 -      4205 G-TT--A-AT------G----TA--CTT
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_2711798           345  5 -       616 A-TT--T--T------------------
i Chaetophractus_vellerosus.ChaVel_scaffold_2711798     C 0 I 4
s Cheirogaleus_major.k141_1157592                           57172 12 -     68416 G-TT--T-GT------A----TA--CTT
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            6214 12 +     13308 G-TT--T-GT------A----TA--CTT
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             3664 12 -     18223 G-TT--A-AT------G----TA--CTT
i Cheracebus_lucifer.k141_619653                        I 5 C 0
s Cheracebus_lugens.k141_203936                             20687 12 +     25473 G-TT--A-AT------G----TA--CTT
i Cheracebus_lugens.k141_203936                         I 5 C 0
s Cheracebus_regulus.k141_2128895                           39726 12 +     57117 G-TT--A-AT------G----TA--CTT
i Cheracebus_regulus.k141_2128895                       I 5 C 0
s Cheracebus_torquatus.k141_315545                          44401 12 +     54541 G-TT--A-AT------G----TA--CTT
i Cheracebus_torquatus.k141_315545                      I 5 C 0
s Chinchilla_lanigera.JH721867.1                         15959992 12 +  43084221 g-tt--t-tt------a----ta--ctt
i Chinchilla_lanigera.JH721867.1                        C 0 I 2
s Chiropotes_israelita.k141_1189915                         69224 12 +    196370 G-TT--A-AT------G----TA--CTT
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          13404 12 +     40510 G-TT--A-AT------G----TA--CTT
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15136613 12 -  15256731 G-TT--A-AT------G----TA--CCT
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      31659 12 -     53260 G-TT--A-AT------G----TA--CCT
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101142108 12 + 101219884 G-TT--A-AT------G----TA--CCT
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                15135  3 -     21363 A-TT------------------------
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 I 6
s Choloepus_hoffmanni.KN194586.1                           760446  3 +    964067 a-tt------------------------
i Choloepus_hoffmanni.KN194586.1                        C 0 I 6
s Colobus_angolensis.KN985967.1                          10880687 12 +  10971483 G-TT--A-AT------G----TA--CTT
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147661844 12 + 156195979 G-TT--A-AT------G----TA--CTT
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            13832 12 +     23629 G-TT--A-AT------G----TA--CTT
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60611298 12 +  78930452 G-AT--T-TT------A----TA--CTT
i Condylura_cristata.JH655880.1                         C 0 I 1
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         38289 12 -     40477 G-AT--T-TT------G----TA--CTT
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 I 1
s Cricetomys_gambianus.CriGam_scaffold_949                 276619 12 -    399297 G-TA--T-TT------A----TA--CTC
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 I 2
s Cricetulus_griseus.LT883672.1                          53027243 12 +  72327488 A-CA--T-TA------A----TA--CTC
i Cricetulus_griseus.LT883672.1                         C 0 I 1
s Crocidura_indochinensis.CroInd_scaffold_38409             18371 12 -     19186 T-TT--T-TA------A----TA--TTT
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 I 1
s Cryptoprocta_ferox.CryFer_flattened_line_19014            50063 12 -     70449 G-AT--T-TT------G----TA--TTT
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 I 1
s Ctenodactylus_gundi.CteGun_scaffold_447                  206377 11 -    956709 --AT--C-TT------A----CA--TTT
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 I 1
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 28941 12 -     67205 G-AT--T-TT------A----TA--CTT
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 I 2
s Cuniculus_paca.CunPac_flattened_line_16637                15985 14 +     26546 G-TT--T-TT------A----TACACTT
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 I 2
s Dasyprocta_punctata.DasPun_flattened_line_634             57084 16 -    236241 G-CT--T-TG------AACTTTG--GTT
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 I 2
s Dasypus_novemcinctus.JH568778.1                          180887  5 -   6883506 A-TT--T--T------------------
i Dasypus_novemcinctus.JH568778.1                       C 0 I 4
s Daubentonia_madagascariensis.ctg11                     16843029 12 +  31942871 G-CT--T-GG------G----TA--CTT
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80035520 12 -  96802777 A-AT--T-TT------G----TA--CTT
i Delphinapterus_leucas.KZ290064.1                      C 0 I 1
s Desmodus_rotundus.KZ672188.1                           18697487 12 -  18957592 G-AT--T-TT------A----TG--CTT
i Desmodus_rotundus.KZ672188.1                          C 0 I 1
s Dicerorhinus_sumatrensis.PEKH010003161.1                 321202 12 +    993696 G-AT--T-TT------G----TG--ATT
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 I 1
s Diceros_bicornis.DicBicMic_scaffold_9545                   1854 12 +    151128 G-AT--T-AT------G----TG--ATT
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 I 1
s Dinomys_branickii.DinBra_scaffold_1996                   155876 12 +    228994 G-TT--T-TT------A----TA--CTT
i Dinomys_branickii.DinBra_scaffold_1996                C 0 I 2
s Dipodomys_ordii.KN672545.1                              3653587 12 +   4240102 G-tc--t-tc------a----aa--att
i Dipodomys_ordii.KN672545.1                            C 0 I 1
s Dipodomys_stephensi.DipSte_scaffold_44365                 25151 12 +     28912 G-TC--T-TC------A----AA--ATT
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 I 1
s Dolichotis_patagonum.DolPat_scaffold_14102                34339 12 -     73477 G-TT--T-TT------A----TA--CTT
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 I 2
s Echinops_telfairi.JH980316.1                           22993545  8 -  44670279 C-TGCTT-TT------------------
i Echinops_telfairi.JH980316.1                          C 0 I 4
s Eidolon_helvum.KE772537.1                                 10866 12 +     24177 G-AT--T-TT------A----TA--CTT
i Eidolon_helvum.KE772537.1                             C 0 I 1
s Elaphurus_davidianus.JRFZ01086400.1                     1490187 12 +   1727528 A-AT--T-TT------G----TA--CTt
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 I 1
s Ellobius_lutescens.LOEQ01003611.1                        237897 12 -    369425 a-ta--t-tt------a----ta--ctC
i Ellobius_lutescens.LOEQ01003611.1                     C 0 I 1
s Ellobius_talpinus.LOJH01090055.1                           4913 12 -      7838 a-ta--t-tt------a----ta--ttc
i Ellobius_talpinus.LOJH01090055.1                      C 0 I 1
s Enhydra_lutris.KZ291749.1                              85869846 12 +  99434291 g-at--t-tt------g----ta--ttt
i Enhydra_lutris.KZ291749.1                             C 0 I 1
s Eptesicus_fuscus.JH977687.1                             4702440 12 +   6522550 G-AT--T-TT------G----TA--CTT
i Eptesicus_fuscus.JH977687.1                           C 0 I 1
s Equus_asinus.JREZ01000062.1                             5851625 18 -   7175178 G-GT--T-TTTTTGACA----TA--ATT
i Equus_asinus.JREZ01000062.1                           C 0 I 1
s Equus_caballus.CM000402.2                              13350128 18 +  41866177 G-GT--T-TTTTTGACA----TA--ATT
i Equus_caballus.CM000402.2                             C 0 I 1
s Equus_przewalskii.ATBW01073585.1                          11618 18 +     92910 G-GT--T-TTTTTGACA----TA--ATT
i Equus_przewalskii.ATBW01073585.1                      C 0 I 1
s Erinaceus_europaeus.JH835290.1                         11531172 12 +  16010500 G-AT--T-TT------G----TA--CTT
i Erinaceus_europaeus.JH835290.1                        C 0 I 3
s Erythrocebus_patas.Contig8                             48768791 12 -  48907691 G-TT--A-AC------G----TA--CTT
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          313726 12 +    330699 A-AT--T-TT------G----TA--CTT
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 I 1
s Eubalaena_japonica.EubJap_flattened_line_7756             60178 12 +     89355 A-AT--T-TT------G----TA--CTT
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 I 1
s Eulemur_albifrons.k141_715837                              3219 12 +     13586 G-TT--C-GT------G----TA--CTT
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               3154 12 -      6809 G-TT--C-GT------G----TA--CTT
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             9629 12 +     36558 G-TT--C-GT------G----TA--CTT
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             5945 12 +     60246 G-TT--T-GT------G----TA--CTT
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 9427 12 +    109717 G-TT--C-GT------G----TA--CTT
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               13807 12 +     16540 G-TT--T-GT------G----TA--CTT
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                14082 12 +     27497 G-TT--C-GT------G----TA--CTT
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           16543 12 +     26808 G-TT--T-GT------G----TA--CTT
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                31272 12 +     46535 G-TT--T-TT------G----TA--CTT
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              13995 12 -     29447 G-TT--T-TT------G----TA--CTT
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129891024 12 - 159252932 g-at--t-tt------a----ta--ttt
i Felis_catus.CM001386.2                                C 0 I 1
s Felis_catus_fca126.CM031420.1                         129278096 12 - 158578461 g-at--t-tt------a----ta--ttt
i Felis_catus_fca126.CM031420.1                         C 0 I 1
s Felis_nigripes.FelNig_flattened_line_8080                 19231 12 +     52776 G-AT--T-TT------A----TA--TTT
i Felis_nigripes.FelNig_flattened_line_8080             C 0 I 1
s Fukomys_damarensis.KN123630.1                          13890936 10 -  19261668 ---T--T-TT------A----GA--CTT
i Fukomys_damarensis.KN123630.1                         C 0 I 2
s Galago_moholi.ctg555                                     209127 12 -    847004 G-TC--T-GT------G----TC--CTT
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           11506 12 -     43889 G-TC--T-GT------G----TC--CTT
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           8574 12 +     27357 A-TC--T-GT------G----TC--CTT
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               154485 12 +    324696 A-CT--T-TT------G----TA--CTT
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 I 1
s Giraffa_tippelskirchi.LVKQ01S012154.1                    179987 12 -    189561 A-AT--T-TT------G----TA--TTT
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 I 1
s Glis_glis.GliGli_scaffold_79770                           10886 12 -     18683 G-TT--C-TT------A----TG--TTT
i Glis_glis.GliGli_scaffold_79770                       I 1 I 1
s Gorilla_beringei.k141_111300                               3375 12 -     14630 G-TT--A-AT------G----TA--CTT
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119650474 12 - 195582420 G-TT--A-AT------G----TA--CTT
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   75626 12 +    118900 A-TT--T-TC------A----TA--TTT
i Graphiurus_murinus.GraMur_scaffold_4493               I 1 I 1
s Hapalemur_alaotrensis.k141_1198205                         3779 12 +      3980 G-TT--T-GT------G----TA--CTT
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             26255 12 +     26611 G-TT--T-GT------G----TA--CTT
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             3715 12 +     56096 G-TT--T-GT------G----TA--CTT
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        26992 12 -     42470 G-TT--T-GT------G----TA--CTT
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        43586 12 -     54384 G-TT--T-GT------G----TA--CTT
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              15271 12 +     53719 A-AT--T-TT------G----TA--TTT
i Helogale_parvula.HelPar_flattened_line_22962          C 0 I 1
s Hemitragus_hylocrius.HemHyl_scaffold_16669                26186 12 -     91191 A-AT--T-TC------G----TA--CTT
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 I 1
s Heterocephalus_glaber.JH602058.1                        2549325 10 +  31725842 ---t--t-tt------a----ga--ctt
i Heterocephalus_glaber.JH602058.1                      C 0 I 2
s Heterohyrax_brucei.HetBruBak_scaffold_25354               55740  8 +     73687 A-TATTT-TT------------------
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 I 4
s Hippopotamus_amphibius.HipAmp_scaffold_1308              145755 12 +    277961 A-AT--T-TT------G----TA--CTT
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 I 1
s Hipposideros_armiger.JXIK01001085.1                      277071 12 -    477199 G-AT--T-TT------A----TA--CTT
i Hipposideros_armiger.JXIK01001085.1                   C 0 I 1
s Hipposideros_galeritus.HipGal_scaffold_104691              6230 12 -      9143 G-AT--T-TT------A----TA--CTT
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 I 1
s Hoolock_leuconedys.ctg79                                      2622 12 -   7690867 G-TT--A-AT------G----TA--CTT
i Hoolock_leuconedys.ctg79                                 I 13 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 14366 12 -     67322 G-AT--T-TT------G----TA--TTT
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 I 1
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           17248 12 -    119109 G-TT--T-TT------A----TA--CTT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 I 2
s Hylobates_abbotti.k141_493872                              3187 12 +      5897 G-TT--A-AT------G----TA--CTT
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_1485652                              1607 12 -      1697 G-TT--A-AT------G----TA--CTT
i Hylobates_agilis.k141_1485652                         C 0 C 0
s Hylobates_klossii.k141_466549                              9631 12 +     11537 G-TT--A-AT------G----TA--CTT
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14622732 12 -  25970782 G-TT--A-AT------G----TA--CTT
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1133650                            2622 12 -      2775 G-TT--A-AT------G----TA--CTT
i Hylobates_muelleri.k141_1133650                       C 0 T 474
s Hylobates_pileatus_a.tarseq_592                             32119 12 -     60944 G-TT--A-AT------G----TA--CTT
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     4374 12 +     22540 G-TT--T-TT------A----TA--CTT
i Hystrix_cristata.HysCri_scaffold_50788                C 0 I 2
s Ictidomys_tridecemlineatus.JH393315.1                   7124252 12 +  13083262 a-tt--t-tt------g----ta--ctt
i Ictidomys_tridecemlineatus.JH393315.1                 I 1 I 1
s Indri_indri.k141_1884019                                   1460 12 -      2196 G-TT--T-GT------G----TA--CTT
i Indri_indri.k141_1884019                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               7508 12 +     17520 A-AT--T-TT------G----TA--CTT
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 I 1
s Jaculus_jaculus.JH725517.1                              8563786 12 +  11848649 G-TA--T-TT------G----TA--tct
i Jaculus_jaculus.JH725517.1                            C 0 I 1
s Kogia_breviceps.KogBre_flattened_line_35920               22338 12 +     37189 A-AT--T-TT------G----TA--CTT
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 I 1
s Lagothrix_lagothricha.k141_12968                          48231 12 -    147782 G-TT--A-AT------G----CA--GTT
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   112240  8 -    115756 --------TT------G----TA--CTT
i Lasiurus_borealis.LasBor_scaffold_5102                I 3 I 1
s Lemur_catta.scaffold_1                                258405275 12 - 285822530 G-TT--T-GT------G----TA--CTT
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        22144 12 +     39228 G-TT--T-GG------G----TA--CTT
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            51519 12 +     63517 G-TT--T-GG------G----TA--CTT
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        76763 12 +    116806 G-TT--T-GG------G----TA--CTT
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     29783 12 -     33031 G-TT--T-GG------G----TA--CTT
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3084063 12 -   3498232 g-at--t-tt------a----ta--ttt
i Leptonychotes_weddellii.KB714749.1                    C 0 I 1
s Lepus_americanus.LepAme_scaffold_62849                    11240 13 +     22452 G-TT--T-TT---G--A----TA--TTT
i Lepus_americanus.LepAme_scaffold_62849                I 3 I 1
s Lipotes_vexillifer.KE558548.1                            134673 12 +   3060487 A-AT--T-TT------G----TA--CTT
i Lipotes_vexillifer.KE558548.1                         C 0 I 1
s Lophocebus_aterrimus.ctg55                             19245874 12 +  19376315 G-TT--A-AT------G----TA--CTT
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            8873 11 +     84689 --TA--C-AG------G----TA--CTT
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3776624 11 +   6799190 --TA--C-AG------G----TA--CTT
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20590386  7 -  62548349 G-TGTTT--T------------------
i Loxodonta_africana.GL010040.1                         C 0 I 4
s Lycaon_pictus.CM007556.1                               11085418 12 +  39895028 a-at--t-tt------g----ta--ttt
i Lycaon_pictus.CM007556.1                              C 0 I 1
s Macaca_arctoides.k141_2201161                             17550 12 +     74745 G-TT--A-AT------G----TA--CTG
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12704060 12 +  12821369 G-TT--A-AT------G----TA--CTG
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               6156 12 +      6569 G-TT--A-AT------G----TA--CTG
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           44458 12 +     63263 G-TT--A-AT------G----TA--CTG
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_925451                                  466 12 +     10231 G-TT--A-AT------G----TA--CTG
i Macaca_fuscata.k119_925451                            C 0 C 0
s Macaca_leonina.k141_3421209                                2607 12 +      3017 G-TT--A-AT------G----TG--CTG
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_mulatta.NC_041755.1                            196033137 12 + 196197964 G-TT--A-AT------G----TA--CTG
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11443243 12 +  11645122 G-TT--A-AT------G----TA--CTG
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_radiata.k141_1580474                                2999 12 -      3617 G-TT--A-AT------G----TA--CTG
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 13329 12 -     55006 G-TT--A-AT------G----TA--CTG
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43838366 12 +  43892939 G-TT--A-AT------G----TG--CTG
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                5588 12 -      5978 G-TT--A-AT------G----TA--CTG
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                700282 12 +    802869 T-AT--T-TT------G----TA--CTT
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 I 1
s Mandrillus_leucophaeus.scaffold125                     43435036 12 -  43563597 G-TT--A-AT------G----TA--CTT
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4447862 12 -   4543643 G-TT--A-AT------G----TA--CTT
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            144775 12 +    252755 G-GT--T-TT------A----TA--CTT
i Manis_javanica.JSZB01003966.1                         C 0 I 1
s Manis_pentadactyla.KN017078.1                             34850 12 +     58827 G-GT--T-TT------G----TA--CTT
i Manis_pentadactyla.KN017078.1                         C 0 I 1
s Marmota_marmota.CZRN01000005.1                         36872087 12 +  64221397 a-tt--t-tt------g----tA--CTT
i Marmota_marmota.CZRN01000005.1                        I 1 I 1
s Megaderma_lyra.MegLyr_scaffold_3562                       62935 13 -    234502 G-AT-GT-TT------G----TA--CTG
i Megaderma_lyra.MegLyr_scaffold_3562                   I 1 I 1
s Mellivora_capensis.MelCap_flattened_line_146202             656 12 -      1999 G-AT--T-TT------A----TA--TTT
i Mellivora_capensis.MelCap_flattened_line_146202       C 0 I 1
s Meriones_unguiculatus.MerUng_scaffold_52233               10191  8 +     15977 G-TA--T-TT------A----T------
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 I 2
s Mesocricetus_auratus.KB708139.1                         1044982 12 -  26018355 A-TA--T-TC------A----TA--CTC
i Mesocricetus_auratus.KB708139.1                       C 0 I 1
s Microcebus_murinus.CM007691.1                          16508389 12 +  47401472 t-tt--t-at------g----ta--CTT
i Microcebus_murinus.CM007691.1                         I 5 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  29971  8 -     48017 A-CGCTT-TT------------------
i Microgale_talazaci.MicTal_scaffold_34660              C 0 I 4
s Micronycteris_hirsuta.MicHir_scaffold_37978               21362 12 -     32043 G-AT--G-TT------G----TG--CTT
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 I 1
s Microtus_ochrogaster.CM001673.1                        22818100 12 -  98408828 a-ta--t-tt------a----ta--ctc
i Microtus_ochrogaster.CM001673.1                       C 0 I 1
s Miniopterus_natalensis.LDJU01000022.1                   8208110 12 +  10048721 G-AT--T-TT------G----TA--Ctt
i Miniopterus_natalensis.LDJU01000022.1                 C 0 I 1
s Miniopterus_schreibersii.MinSch_scaffold_24116            32782 12 +     45743 G-AT--T-TT------G----TA--CTT
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 I 1
s Miopithecus_ogouensis.k141_2666161                        33691 12 +     34273 G-TT--A-AT------G----TA--CTT
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         9369 12 -    104932 G-AT--T-TT------A----TA--TTT
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 I 1
s Mirza_zaza.k141_226143                                     3787 12 +      8497 T-TT--T-GT------G----TG--CTT
i Mirza_zaza.k141_226143                                I 3 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 145108 12 +    154973 A-AT--T-TT------G----TA--CTT
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 I 1
s Mormoops_blainvillei.MorMeg_scaffold_2952                159868 12 +    265003 G-AT--T-TT------G----TA--CTT
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 I 1
s Moschus_moschiferus.MosMos_scaffold_146101                 3289 12 -      4346 A-AT--T-TT------G----TA--CTT
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 I 1
s Mungos_mungo.MunMun_flattened_line_8729                  142962 12 -    168139 G-AT--T-TT------G----TA--TTT
i Mungos_mungo.MunMun_flattened_line_8729               C 0 I 1
s Murina_feae.MurFea_scaffold_2254                          17746 13 -    100666 G-AT--TTTT------G----TA--CCT
i Murina_feae.MurFea_scaffold_2254                      C 0 I 1
s Mus_caroli.LT608236.1                                  70764583 12 +  92629107 g-ta--t-tt------a----tA--ATC
i Mus_caroli.LT608236.1                                 C 0 I 1
s Mus_musculus.chr16                                     75487624 12 +  98207768 g-ta--t-tt------a----tA--ATC
i Mus_musculus.chr16                                    C 0 I 1
s Mus_pahari.LT608305.1                                  67553812 12 +  89017189 G-TA--T-TT------A----TA--ATC
i Mus_pahari.LT608305.1                                 C 0 I 1
s Mus_spretus.CM004110.1                                 74328805 12 +  97876770 g-ta--t-tt------a----tA--ATC
i Mus_spretus.CM004110.1                                C 0 I 1
s Muscardinus_avellanarius.MusAve_scaffold_9643              9367 13 +     98495 T-TT-TT-TT------A----TA--TTT
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 1 I 1
s Mustela_putorius.JH417978.1                             4422228 12 -  28371801 g-at--t-tt------a----ta--ttt
i Mustela_putorius.JH417978.1                           C 0 I 1
s Myocastor_coypus.MyoCoy_scaffold_3653                     88292 12 -    117718 G-TC--T-TC------A----TA--CTT
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 I 2
s Myotis_brandtii.KE161952.1                               966072 12 +   8389877 G-AT--T-TT------G----TA--CCt
i Myotis_brandtii.KE161952.1                            C 0 I 1
s Myotis_davidii.KB114863.1                               5017761 12 +   6462685 G-AT--T-TT------G----TA--CCt
i Myotis_davidii.KB114863.1                             C 0 I 1
s Myotis_lucifugus.GL429887.1                             3463658 12 -   3747815 G-AT--T-TT------G----TA--CCt
i Myotis_lucifugus.GL429887.1                           C 0 I 1
s Myotis_myotis.MyoMyo_scaffold_6123                         8852 12 +     66751 G-AT--T-TT------G----TA--CCT
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 I 1
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3734  6 -      8794 A-TT--T-TT------------------
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 I 4
s Nannospalax_galili.KL201303.1                            108713 12 +    362372 A-TT--T-GT------A----TA--ACC
i Nannospalax_galili.KL201303.1                         C 0 I 2
s Nasalis_larvatus.k141_153429                               6066 12 +     48152 G-TT--A-AT------G----TA--CTT
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4482963 12 -  14209539 g-at--t-tt------a----ta--ttt
i Neomonachus_schauinslandi.NINY01007774.1              C 0 I 1
s Neophocaena_asiaeorientalis.KZ688543.1                  3949721 12 -   4490290 A-AT--T-TT------G----TA--CTT
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 I 1
s Noctilio_leporinus.NocLep_scaffold_12062                  47975 12 +     94413 T-AT--T-TT------G----TA--CTT
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 I 1
s Nomascus_annamensis.k141_302224                              36 12 +      1516 G-TT--A-AT------G----TA--CTT
i Nomascus_annamensis.k141_302224                       C 0 C 0
s Nomascus_concolor.k141_49591                               1157 12 +      2014 G-TT--A-AT------G----TA--CTT
i Nomascus_concolor.k141_49591                          C 0 C 0
s Nomascus_gabriellae.k141_642452                              82 12 +      2851 G-TT--A-AT------G----TA--CTT
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             22961 12 -  18771707 G-TT--A-AT------G----TA--CTT
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                   710 12 +      4512 G-TT--A-AT------G----TA--CTT
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                28411 12 +   3668941 a-at--t-tt------g----ta--ttt
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 I 1
s Nycticebus_bengalensis.LG16                            65565512 11 -  95554990 --TA--C-CG------G----TA--CTT
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            2240 11 +      6470 --TA--C-CG------G----TA--CTT
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65667860 11 +  89412551 --TA--C-AG------G----TA--CTT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4994221 13 -  23139505 G-CT--T-AT---G--G----TA--TTT
i Ochotona_princeps.JH802095.1                          I 4 I 1
s Octodon_degus.JH651621.1                                3683784 12 +  10294119 g-tt--t-tt------a----ta--ctt
i Octodon_degus.JH651621.1                              C 0 I 2
s Odobenus_rosmarus.KB229369.1                             677613 12 -   3126709 g-at--t-tt------a----ta--ttt
i Odobenus_rosmarus.KB229369.1                          C 0 I 1
s Odocoileus_virginianus.KZ101650.1                       1078417 12 +   1425656 A-AT--T-TT------G----TA--CTT
i Odocoileus_virginianus.KZ101650.1                     C 0 I 1
s Okapia_johnstoni.LVCL01S0017931.1                         35712 12 +     78940 A-AT--T-TT------G----TA--CTT
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 I 1
s Ondatra_zibethicus.OndZib_scaffold_6821                  123368 12 +    145789 A-TA--T-TT------A----TA--CTC
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 I 1
s Onychomys_torridus.OnyTor_scaffold_12578                  35128 12 +     62360 A-TA--T-TT------A----TA--CTC
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 I 1
s Orcinus_orca.KB316965.1                                 7223405 12 -   7562323 A-AT--T-TT------G----TA--CTT
i Orcinus_orca.KB316965.1                               C 0 I 1
s Orycteropus_afer.OryAfe_flattened_line_13509              42323  8 -     66828 A-TGTTT-CT------------------
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 I 4
s Oryctolagus_cuniculus.CM000803.1                      141873904 13 + 163896628 G-TT--T-TT---G--A----TA--CTT
i Oryctolagus_cuniculus.CM000803.1                      I 3 I 1
s Otocyon_megalotis.JAEUCK010005121.1                      305749 12 -    505867 A-AT--T-TT------G----TA--TTT
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 I 1
s Otolemur_crassicaudatus.k141_321880                       37217 12 +     38679 G-TC--T-GT------G----TC--CTT
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18006659 12 -  38779656 G-TC--T-GT------G----TC--CTt
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134075979 12 - 275406953 A-AT--T-TC------G----TA--CTT
i Ovis_aries.CM001582.2                                 C 0 I 1
s Ovis_canadensis.OviCan_scaffold_6251                      77193 12 +    140051 A-AT--T-TC------G----TA--CTT
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 I 1
s Pan_paniscus.CM003386.1                               127572719 12 - 205426864 G-TT--A-AT------G----TA--CTT
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120149872 12 - 196562556 G-TT--A-AT------G----TA--CTT
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  32426 12 +    295523 G-AT--T-TT------A----TA--TTT
i Panthera_onca.PanOnc_flattened_line_1615              C 0 I 1
s Panthera_pardus.KV860323.1                              3636160 12 +  18214204 g-at--t-tt------a----ta--ttt
i Panthera_pardus.KV860323.1                            C 0 I 1
s Panthera_tigris.KE721879.1                              5025807 12 -   6340057 g-at--t-tt------a----ta--ttt
i Panthera_tigris.KE721879.1                            C 0 I 1
s Pantholops_hodgsonii.KE114631.1                         1064840 12 -   1292953 A-AT--T-TT------G----TA--CTT
i Pantholops_hodgsonii.KE114631.1                       C 0 I 1
s Papio_anubis.CM001492.2                               188153818 12 - 188283584 G-TT--A-AT------G----TA--CTT
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            50030 12 +     76494 G-TT--A-AT------G----TA--CTT
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47511215 12 +  47705337 G-TT--A-AT------G----TA--CTT
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 65192 12 -    104429 G-TT--A-AT------G----TA--CTT
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  14983 12 -     29451 G-TT--A-AT------G----TA--CTT
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                35386 12 +     35859 G-TT--A-AT------G----TA--CTT
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113723 12 -    135482 G-AT--T-TT------G----TA--TTT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 I 1
s Perodicticus_ibeanus.k141_117958                           3266 11 -     23713 --TA--C-AG------G----TA--CTT
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            22564 11 -     27972 --TA--C-AG------G----TA--CTT
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      41131  5 -     45160 G-TC--T-T-------------------
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 I 39
s Peromyscus_maniculatus.KI615518.1                       4948309 12 -   8017169 a-ta--t-tt------a----ta--CTC
i Peromyscus_maniculatus.KI615518.1                     C 0 I 1
s Petromus_typicus.PetTyp_scaffold_33007                    10478 12 -     36578 A-TT--T-TT------A----GA--CTT
i Petromus_typicus.PetTyp_scaffold_33007                C 0 I 2
s Phocoena_phocoena.PhoPho_flattened_line_11948            120022 12 -    122454 A-AT--T-TT------G----TA--CTT
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 I 1
s Piliocolobus_badius.k141_1497351                           3072 12 -      3310 G-TT--A-AC------G----TA--CTT
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       22977 12 -     82327 G-TT--A-AC------G----TA--CTT
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           19724 12 +     19957 G-TT--A-AC------G----TA--CTT
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26737738 12 +  26888534 G-TT--A-AC------G----TA--CTT
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            95515 12 +    112873 G-AT--T-TT------G----TA--TTT
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 I 1
s Pithecia_albicans.k141_991845                             41716 12 -     61926 G-TT--A-AT------G----TA--CTT
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        23145 12 +     78826 A-TT--A-AT------G----TA--CTT
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              7096 12 -     15800 G-TT--A-AT------G----TA--CTT
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        10294 12 -     16101 G-TT--A-AT------G----TA--CTT
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          3603 12 +      9673 G-TT--A-AT------G----TA--CTT
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13472597 12 -  19735023 G-TT--A-AT------G----TA--CTT
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           11505 12 -     31692 G-TT--A-AT------G----TA--CTT
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           4088 12 +     21690 A-AT--T-TT------G----TA--CTT
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 I 1
s Plecturocebus_bernhardi.k141_959214                       20941 12 +     44506 G-TT--A-AT------G----TA--CTT
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        21151 12 +     67491 A-TT--A-AT------G----TA--CTT
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      11392 12 -     98129 G-TT--A-AT------G----TA--CTT
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     20997 12 +    147771 G-TT--A-AT------G----TA--CTT
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        21246 12 -     23762 G-TT--A-AT------G----TA--CTT
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          1713 12 -     55515 G-TT--A-AT------G----TA--CTT
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         21066 12 +    152463 G-TT--A-AT------G----TA--CTT
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      7826 12 +      8943 G-TT--A-AT------G----TA--CTT
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                         10786 12 +    134592 G-TT--A-AT------G----TA--CTT
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          21376 12 -     75465 G-TT--A-AT------G----TA--CTT
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              185263 12 -    373494 G-TT--A-AT------G----TA--CTT
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19805171 12 +  19899266 G-TT--A-AT------G----TA--CTT
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               3310 12 -     15069 G-TT--A-AT------G----TA--CTT
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              3444 12 +     14865 G-TT--A-AT------G----TA--CTT
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                75611  8 +     78963 A-TGTTT-TT------------------
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 I 4
s Prolemur_simus.MPIZ01000048.1                           6846651 12 +  12164890 G-TT--T-GT------A----TA--CTT
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    665964 12 -   2312742 G-TT--T-GT------A----TA--CTT
i Propithecus_coquerelli.NW_012147997.1                 I 695 C 0
s Propithecus_coronatus.k141_1353159                         1794 12 +     11805 G-TT--T-GT------G----TA--CTT
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           41129 12 +     52369 G-TT--T-GT------G----TA--CTT
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         33518 12 -     44753 G-TT--T-GT------G----CA--CTT
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            15439 12 +     27322 G-TT--T-GT------G----TA--CTT
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       15078 12 -     53241 G-TT--T-GT------A----TA--CTT
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         37349 12 -     48185 G-TT--T-GT------A----TA--TTT
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           31731  8 +     77221 G-TA--T-TT------A----T------
i Psammomys_obesus.NESX01026517.1                       C 0 I 2
s Pteronotus_parnellii.KE867983.1                            2537 12 -     27784 g-at--t-tt------g----ta--ctt
i Pteronotus_parnellii.KE867983.1                       C 0 I 1
s Pteronura_brasiliensis.PteBra_flattened_line_1343        244322 12 -    344369 G-AT--T-TT------A----TA--TTT
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 I 1
s Pteropus_alecto.KB031157.1                             13244667 12 -  17261082 G-AT--T-TT------G----TA--CTT
i Pteropus_alecto.KB031157.1                            C 0 I 1
s Pteropus_vampyrus.KN525959.1                             602617 12 -   3946241 G-AT--T-TT------G----TA--CTT
i Pteropus_vampyrus.KN525959.1                          C 0 I 1
s Puma_concolor.QAVW01000427.1                          131532389 12 - 161321710 g-at--t-tt------a----ta--ttt
i Puma_concolor.QAVW01000427.1                          C 0 I 1
s Pygathrix_cinerea.k141_374971                             27435 12 +     56732 G-TT--A-AT------G----TA--CTT
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6803926 12 +   6970761 G-TT--A-AT------G----TA--CTT
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             3319 12 +     18040 G-TT--A-AT------G----TA--CTT
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                14494 12 +     68503 A-AT--T-TT------G----TA--CTT
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 I 1
s Rattus_norvegicus.chr11                                13913678 12 +  90463843 G-TA--T-TT------A----TG--CTC
i Rattus_norvegicus.chr11                               C 0 I 1
s Rhinolophus_sinicus.LVEH01000179.1                      1786481 12 +   2252614 G-AT--T-TT------G----TA--Ctt
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 I 1
s Rhinopithecus_bieti.k119_102124                           13872 12 -     14454 G-TT--A-AT------G----TA--CTT
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206375198 12 - 206558726 G-TT--A-AT------G----TA--CTT
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44854098 12 -  45163003 G-TT--A-AT------G----TA--CTT
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                17957 12 +    109198 G-AT--T-TC------G----TA--CTT
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 I 1
s Saiga_tatarica.SaiTat_scaffold_82192                       6296 12 +     12214 A-AT--T-TT------G----TA--CTT
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 I 1
s Saimiri_boliviensis.NW_024100938.1                     15670815 12 -  43202129 G-TT--A-AT------G----TA--CTT
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        2681 12 +     34089 G-TT--A-AT------G----TA--CTT
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              2622 12 -     60842 G-TT--A-AT------G----TA--CTT
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              2717 12 +     67014 G-TT--A-AT------G----TA--CTT
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              2695 12 +     60816 G-TT--A-AT------G----TA--CTT
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 2632 12 -     76454 G-TT--A-AT------G----TA--CTT
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17339388 12 -  30362882 G-TT--A-AT------G----TA--CTT
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         18763 12 -     62485 G-TT--A-AT------G----TA--CTT
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   30049 12 -    114521 A-AC--T-TT------A----TA--ATT
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 I 1
s Semnopithecus_entellus.k141_1527475                       25862 12 +     26421 G-TT--A-AT------G----TA--CTT
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       6322 12 +     20762 G-TT--A-AT------G----TA--CTT
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         40057 12 +     40653 G-TT--A-AT------G----TA--CTT
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                           10614 12 -     12194 G-TT--A-AT------G----TA--CTT
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     24036 12 -     27512 G-TT--A-AT------G----TA--CTT
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         33051 12 -     33692 G-TT--A-AT------G----TA--CTT
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   97905 12 -    120886 A-TA--T-TT------A----TG--CTC
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 I 1
s Solenodon_paradoxus.SolPar_flattened_line_1012            16673 12 +    739146 A-AT--T-TT------G----TA--CTT
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 I 1
s Spermophilus_dauricus.KZ294190.1                        2238168 13 +   2842873 aatt--t-tt------t----ta--ctt
i Spermophilus_dauricus.KZ294190.1                      I 1 I 1
s Spilogale_gracilis.SpiGra_flattened_line_905             233074 12 -    276980 G-AT--T-TT------A----TA--TTT
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 I 1
s Suricata_suricatta.SurSur_flattened_line_20339            25628 12 +     62062 G-AT--T-TT------G----TA--TTT
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 I 1
s Sus_scrofa.CM000824.4                                 189270542 12 + 218635234 g-at--t-tt------g----tt--ttt
i Sus_scrofa.CM000824.4                                 C 0 I 1
s Symphalangus_syndactylus.tarseq_24                        12989 12 -  13920577 G-TT--A-AT------G----TA--CTT
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               4483  6 -      6213 G-AT--T-AT------------------
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               13410  3 +     45698 G-TT------------------------
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 I 6
s Tapirus_indicus.TapInd_scaffold_176                      805407 12 +   1148477 G-AT--T-TT------G----TA--ATT
i Tapirus_indicus.TapInd_scaffold_176                   C 0 I 1
s Tapirus_terrestris.TapTer_scaffold_14939                  56067 12 +     99546 G-AT--T-TT------G----TA--ATT
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 I 1
s Tarsius_lariang.k141_609102                               24708 12 +     42269 G-TT--T-AG------G----TA--CTT
i Tarsius_lariang.k141_609102                           C 0 I 1
s Tarsius_wallacei.k141_48636                               58024 12 +     65473 G-TT--T-AG------G----CA--CTT
i Tarsius_wallacei.k141_48636                           C 0 I 1
s Theropithecus_gelada.CM009951.1                       194005354 12 - 194193292 G-TT--A-AT------G----TA--CTT
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             37539 12 -     47444 G-AT--T-TT------A----GA--CTT
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 I 2
s Tolypeutes_matacus.TolMat_scaffold_269431                  2831  5 +      6782 A-TT--T--T------------------
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 I 4
s Tonatia_saurophila.TonSau_scaffold_3334                  134546 12 -    259118 G-AT--T-TT------G----TG--CTT
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 I 1
s Trachypithecus_auratus.k141_738098                        24432 12 +     38948 G-TT--A-AT------G----TA--CTT
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   18159 12 -     32910 G-TT--A-AT------G----TA--CTT
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       24057 12 +     24652 G-TT--A-AT------G----TA--CTT
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      2935 12 -      3559 G-TT--A-AT------G----TA--CTT
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           40879 12 -     54611 G-TT--A-AT------G----TA--CTT
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       16880 12 +     17312 G-TT--A-AT------G----TA--CTT
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    24243 12 -     25040 G-TT--A-AT------G----TA--CTT
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          2904 12 +      3528 G-TT--A-AT------G----TA--CTT
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  49271 12 +     51589 G-TT--A-AT------G----TA--CTT
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       12447 12 +     14732 G-TT--A-AT------G----TA--CTT
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       2924 12 -     28054 G-TT--A-AT------G----TA--CTT
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44657719 12 -  44834318 G-TT--A-AT------G----TA--CTT
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        2728 12 +      3372 G-TT--A-AT------G----TA--CTT
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   3882 12 +     90398 A-AT--T-GT------G----CA--CTT
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 I 1
s Trichechus_manatus.JH594618.1                          16080835  8 +  31416278 A-TGTTC-TT------------------
i Trichechus_manatus.JH594618.1                         C 0 I 4
s Tursiops_truncatus.MRVK01000923.1                      69312122 12 -  96451834 A-AT--T-TT------G----TA--CTT
i Tursiops_truncatus.MRVK01000923.1                     C 0 I 3
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 25245  4 -     25548 ----------------------A--TTT
i Uropsilus_gracilis.UroGra_scaffold_4143_0             I 3 I 1
s Ursus_maritimus.KK498671.1                              6512880 12 +  28682327 t-at--t-tt------g----ta--ttt
i Ursus_maritimus.KK498671.1                            C 0 I 1
s Varecia_rubra.k141_432109                                  3495 12 -     20643 G-TT--T-GT------G----TA--CTT
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             23037 12 -     33872 G-TT--T-GT------G----TA--CTT
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1523347 12 -   2331223 G-AT--T-TT------G----TA--CTT
i Vicugna_pacos.KN269600.1                              C 0 I 1
s Vulpes_lagopus.VulLag_flattened_line_2045                135818 12 -    281493 A-AT--T-TT------G----TA--TTT
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 I 1
s Xerus_inauris.XerIna_scaffold_7898                       125259 12 -    134049 A-TT--T-TT------G----TA--TTC
i Xerus_inauris.XerIna_scaffold_7898                    I 1 I 1
s Zalophus_californianus.ZalCal_flattened_line_4097        212348 12 -    227762 G-AT--T-TT------A----TA--TTT
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 I 1
s Zapus_hudsonius.ZapHud_scaffold_64392                     13497 12 -     20485 G-TA--T-TT------G----TA--CCT
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 I 1
s Ziphius_cavirostris.ZipCav_flattened_line_127025           5619 12 -      8775 A-AT--T-TT------G----TA--CTT
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 I 1
e Sorex_araneus.JH798170.1                               17748817 583 -  27805282 I
e Chrysochloris_asiatica.ChrAsi_scaffold_141308              7105 1700 -     12508 I
e Mesoplodon_bidens.MesBid_scaffold_183284                   2166 255 +      2166 T
e Elephantulus_edwardii.JH947210.1                        7805376  0 +  15467074 C
e Tupaia_tana.TupTan_flattened_line_68454                    3156  0 +     13056 C
e Tupaia_chinensis.KB320831.1                             2790632  0 -   3938065 C
e Macaca_tonkeana.k141_2870633                               2864 158 -     27140 T
e Macaca_nigra.k141_282495                                   2859 158 -     46448 T
e Macaca_maura.k141_251854                                  43912 158 -     79256 T

a score=0.000000
s hg38.chr4_GL000008v2_random                                9989 1 +    209709 T
s Allenopithecus_nigroviridis.k141_3103707                  61002 1 +     61638 T
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        52814 1 +     53391 T
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         3539 1 +     72529 T
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          3114 1 +      3797 T
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Cercocebus_atys.KQ010443.1                              6552798 1 +   6739814 T
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      54275 1 -     54931 T
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         19259 1 -     19697 T
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         56790 1 -    107033 T
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        3230 1 -      3853 T
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          27161 1 +     30494 T
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           3190 1 -      4022 T
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          3079 1 -      3505 T
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           21867 1 +     35983 T
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11988404 1 +  12117833 T
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46475157 1 +  46592721 T
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      32986 1 +     33420 T
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        3020 1 -      3443 T
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      4018 1 -      4669 T
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        3806 1 -      4411 T
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         3341 1 -      4205 T
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chlorocebus_aethiops.ctg22                             15136625 1 -  15256731 T
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      31671 1 -     53260 T
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101142120 1 + 101219884 T
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10880699 1 +  10971483 T
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147661856 1 + 156195979 T
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            13844 1 +     23629 T
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Erythrocebus_patas.Contig8                             48768803 1 -  48907691 T
i Erythrocebus_patas.Contig8                            C 0 C 0
s Gorilla_beringei.k141_111300                               3387 1 -     14630 T
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119650486 1 - 195582420 T
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Hoolock_leuconedys.ctg79                                      2634 1 -   7690867 T
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hylobates_abbotti.k141_493872                              3199 1 +      5897 T
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_1485652                              1619 1 -      1697 T
i Hylobates_agilis.k141_1485652                         C 0 C 0
s Hylobates_klossii.k141_466549                              9643 1 +     11537 T
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14622744 1 -  25970782 T
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                               0 1 -      2977 T
i Hylobates_muelleri.k141_1389047                       n 474 C 0
s Hylobates_pileatus_a.tarseq_592                             32131 1 -     60944 T
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19245886 1 +  19376315 T
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Macaca_arctoides.k141_2201161                             17562 1 +     74745 T
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12704072 1 +  12821369 T
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               6168 1 +      6569 T
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           44470 1 +     63263 T
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_925451                                  478 1 +     10231 T
i Macaca_fuscata.k119_925451                            C 0 C 0
s Macaca_leonina.k141_3421209                                2619 1 +      3017 T
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_mulatta.NC_041755.1                            196033149 1 + 196197964 T
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11443255 1 +  11645122 T
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_radiata.k141_1580474                                3011 1 -      3617 T
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 13341 1 -     55006 T
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43838378 1 +  43892939 T
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                5600 1 -      5978 T
i Macaca_thibetana.k99_116940                           C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43435048 1 -  43563597 T
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4447874 1 -   4543643 T
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        33703 1 +     34273 T
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Nasalis_larvatus.k141_153429                               6078 1 +     48152 T
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Nomascus_annamensis.k141_302224                              48 1 +      1516 T
i Nomascus_annamensis.k141_302224                       C 0 C 0
s Nomascus_concolor.k141_49591                               1169 1 +      2014 T
i Nomascus_concolor.k141_49591                          C 0 C 0
s Nomascus_gabriellae.k141_642452                              94 1 +      2851 T
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             22973 1 -  18771707 T
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                   722 1 +      4512 T
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Pan_paniscus.CM003386.1                               127572731 1 - 205426864 T
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120149884 1 - 196562556 T
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Papio_anubis.CM001492.2                               188153830 1 - 188283584 T
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            50042 1 +     76494 T
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47511227 1 +  47705337 T
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 65204 1 -    104429 T
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  14995 1 -     29451 T
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                35398 1 +     35859 T
i Papio_ursinus.k141_3762866                            C 0 C 0
s Piliocolobus_badius.k141_1497351                           3084 1 -      3310 T
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       22989 1 -     82327 T
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           19736 1 +     19957 T
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26737750 1 +  26888534 T
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pongo_abelii.NDHI03003816.1                              185275 1 -    373494 T
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19805183 1 +  19899266 T
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               3322 1 -     15069 T
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              3456 1 +     14865 T
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Pygathrix_cinerea.k141_374971                             27447 1 +     56732 T
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6803938 1 +   6970761 T
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             3331 1 +     18040 T
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rhinopithecus_bieti.k119_102124                           13884 1 -     14454 T
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206375210 1 - 206558726 T
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44854110 1 -  45163003 T
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Semnopithecus_entellus.k141_1527475                       25874 1 +     26421 T
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       6334 1 +     20762 T
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         40069 1 +     40653 T
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                           10626 1 -     12194 T
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     24048 1 -     27512 T
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         33063 1 -     33692 T
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        13001 1 -  13920577 T
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Theropithecus_gelada.CM009951.1                       194005366 1 - 194193292 T
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Trachypithecus_auratus.k141_738098                        24444 1 +     38948 T
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   18171 1 -     32910 T
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       24069 1 +     24652 T
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      2947 1 -      3559 T
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           40891 1 -     54611 T
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       16892 1 +     17312 T
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    24255 1 -     25040 T
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          2916 1 +      3528 T
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  49283 1 +     51589 T
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       12459 1 +     14732 T
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       2936 1 -     28054 T
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44657731 1 -  44834318 T
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        2740 1 +      3372 T
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
e Eptesicus_fuscus.JH977687.1                             4702452 1 +   6522550 I
e Macroglossus_sobrinus.MacSob_scaffold_879                700294 1 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             37551 2 -     47444 I
e Petromus_typicus.PetTyp_scaffold_33007                    10490 2 -     36578 I
e Sorex_araneus.JH798170.1                               17748817 583 -  27805282 I
e Dinomys_branickii.DinBra_scaffold_1996                   155888 2 +    228994 I
e Erinaceus_europaeus.JH835290.1                         11531184 3 +  16010500 I
e Chaetophractus_vellerosus.ChaVel_scaffold_2711798           350 4 -       616 I
e Aplodontia_rufa.AprRuf_scaffold_156013                     2138 1 +      5067 I
e Oryctolagus_cuniculus.CM000803.1                      141873917 1 + 163896628 I
e Ochotona_princeps.JH802095.1                            4994234 1 -  23139505 I
e Lepus_americanus.LepAme_scaffold_62849                    11253 1 +     22452 I
e Perognathus_longimembris.PerPac_flattened_line_22291      41136 39 -     45160 I
e Dipodomys_stephensi.DipSte_scaffold_44365                 25163 1 +     28912 I
e Dipodomys_ordii.KN672545.1                              3653599 1 +   4240102 I
e Suricata_suricatta.SurSur_flattened_line_20339            25640 1 +     62062 I
e Chrysochloris_asiatica.ChrAsi_scaffold_141308              7105 1700 -     12508 I
e Ziphius_cavirostris.ZipCav_flattened_line_127025           5631 1 -      8775 I
e Zalophus_californianus.ZalCal_flattened_line_4097        212360 1 -    227762 I
e Vulpes_lagopus.VulLag_flattened_line_2045                135830 1 -    281493 I
e Vicugna_pacos.KN269600.1                                1523359 1 -   2331223 I
e Ursus_maritimus.KK498671.1                              6512892 1 +  28682327 I
e Uropsilus_gracilis.UroGra_scaffold_4143_0                 25249 1 -     25548 I
e Tursiops_truncatus.MRVK01000923.1                      69312134 3 -  96451834 I
e Trichechus_manatus.JH594618.1                          16080843 4 +  31416278 I
e Tragulus_javanicus.TraJav_scaffold_14717                   3894 1 +     90398 I
e Tonatia_saurophila.TonSau_scaffold_3334                  134558 1 -    259118 I
e Tolypeutes_matacus.TolMat_scaffold_269431                  2836 4 +      6782 I
e Tapirus_terrestris.TapTer_scaffold_14939                  56079 1 +     99546 I
e Tapirus_indicus.TapInd_scaffold_176                      805419 1 +   1148477 I
e Tamandua_tetradactyla.TamTet_scaffold_26877               13413 6 +     45698 I
e Tadarida_brasiliensis.TadBra_scaffold_145589               4489 0 -      6213 C
e Sus_scrofa.CM000824.4                                 189270554 1 + 218635234 I
e Spilogale_gracilis.SpiGra_flattened_line_905             233086 1 -    276980 I
e Solenodon_paradoxus.SolPar_flattened_line_1012            16685 1 +    739146 I
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   30061 1 -    114521 I
e Saiga_tatarica.SaiTat_scaffold_82192                       6308 1 +     12214 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                17969 1 +    109198 I
e Rhinolophus_sinicus.LVEH01000179.1                      1786493 1 +   2252614 I
e Rangifer_tarandus.RanTarSib_scaffold_24239                14506 1 +     68503 I
e Puma_concolor.QAVW01000427.1                          131532401 1 - 161321710 I
e Pteropus_vampyrus.KN525959.1                             602629 1 -   3946241 I
e Pteropus_alecto.KB031157.1                             13244679 1 -  17261082 I
e Pteronura_brasiliensis.PteBra_flattened_line_1343        244334 1 -    344369 I
e Pteronotus_parnellii.KE867983.1                            2549 1 -     27784 I
e Procavia_capensis.ProCapCap_scaffold_15315                75619 4 +     78963 I
e Platanista_gangetica.PlaMin_flattened_line_72990           4100 1 +     21690 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            95527 1 +    112873 I
e Phocoena_phocoena.PhoPho_flattened_line_11948            120034 1 -    122454 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113735 1 -    135482 I
e Pantholops_hodgsonii.KE114631.1                         1064852 1 -   1292953 I
e Panthera_tigris.KE721879.1                              5025819 1 -   6340057 I
e Panthera_pardus.KV860323.1                              3636172 1 +  18214204 I
e Panthera_onca.PanOnc_flattened_line_1615                  32438 1 +    295523 I
e Ovis_canadensis.OviCan_scaffold_6251                      77205 1 +    140051 I
e Ovis_aries.CM001582.2                                 134075991 1 - 275406953 I
e Otocyon_megalotis.JAEUCK010005121.1                      305761 1 -    505867 I
e Orycteropus_afer.OryAfe_flattened_line_13509              42331 4 -     66828 I
e Orcinus_orca.KB316965.1                                 7223417 1 -   7562323 I
e Okapia_johnstoni.LVCL01S0017931.1                         35724 1 +     78940 I
e Odocoileus_virginianus.KZ101650.1                       1078429 1 +   1425656 I
e Odobenus_rosmarus.KB229369.1                             677625 1 -   3126709 I
e Nyctereutes_procyonoides.CAJHUB010000786.1                28423 1 +   3668941 I
e Noctilio_leporinus.NocLep_scaffold_12062                  47987 1 +     94413 I
e Neophocaena_asiaeorientalis.KZ688543.1                  3949733 1 -   4490290 I
e Neomonachus_schauinslandi.NINY01007774.1                4482975 1 -  14209539 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3740 4 -      8794 I
e Myotis_myotis.MyoMyo_scaffold_6123                         8864 1 +     66751 I
e Myotis_lucifugus.GL429887.1                             3463670 1 -   3747815 I
e Myotis_davidii.KB114863.1                               5017773 1 +   6462685 I
e Myotis_brandtii.KE161952.1                               966084 1 +   8389877 I
e Mustela_putorius.JH417978.1                             4422240 1 -  28371801 I
e Murina_feae.MurFea_scaffold_2254                          17759 1 -    100666 I
e Mungos_mungo.MunMun_flattened_line_8729                  142974 1 -    168139 I
e Moschus_moschiferus.MosMos_scaffold_146101                 3301 1 -      4346 I
e Mormoops_blainvillei.MorMeg_scaffold_2952                159880 1 +    265003 I
e Monodon_monoceros.MonMon_M_scaffold_5598                 145120 1 +    154973 I
e Mirounga_angustirostris.MirAng_flattened_line_8852         9381 1 -    104932 I
e Miniopterus_schreibersii.MinSch_scaffold_24116            32794 1 +     45743 I
e Miniopterus_natalensis.LDJU01000022.1                   8208122 1 +  10048721 I
e Micronycteris_hirsuta.MicHir_scaffold_37978               21374 1 -     32043 I
e Microgale_talazaci.MicTal_scaffold_34660                  29979 4 -     48017 I
e Mesoplodon_bidens.MesBid_scaffold_183284                   2166 255 +      2166 T
e Mellivora_capensis.MelCap_flattened_line_146202             668 1 -      1999 I
e Megaderma_lyra.MegLyr_scaffold_3562                       62948 1 -    234502 I
e Manis_pentadactyla.KN017078.1                             34862 1 +     58827 I
e Manis_javanica.JSZB01003966.1                            144787 1 +    252755 I
e Lycaon_pictus.CM007556.1                               11085430 1 +  39895028 I
e Loxodonta_africana.GL010040.1                          20590393 4 -  62548349 I
e Lipotes_vexillifer.KE558548.1                            134685 1 +   3060487 I
e Leptonychotes_weddellii.KB714749.1                      3084075 1 -   3498232 I
e Lasiurus_borealis.LasBor_scaffold_5102                   112248 1 -    115756 I
e Kogia_breviceps.KogBre_flattened_line_35920               22350 1 +     37189 I
e Inia_geoffrensis.IniGeo_flattened_line_66725               7520 1 +     17520 I
e Hyaena_hyaena.HyaHya_flattened_line_20729                 14378 1 -     67322 I
e Hipposideros_galeritus.HipGal_scaffold_104691              6242 1 -      9143 I
e Hipposideros_armiger.JXIK01001085.1                      277083 1 -    477199 I
e Hippopotamus_amphibius.HipAmp_scaffold_1308              145767 1 +    277961 I
e Heterohyrax_brucei.HetBruBak_scaffold_25354               55748 4 +     73687 I
e Hemitragus_hylocrius.HemHyl_scaffold_16669                26198 1 -     91191 I
e Helogale_parvula.HelPar_flattened_line_22962              15283 1 +     53719 I
e Giraffa_tippelskirchi.LVKQ01S012154.1                    179999 1 -    189561 I
e Felis_nigripes.FelNig_flattened_line_8080                 19243 1 +     52776 I
e Felis_catus_fca126.CM031420.1                         129278108 1 - 158578461 I
e Eubalaena_japonica.EubJap_flattened_line_7756             60190 1 +     89355 I
e Eschrichtius_robustus.EscRob_flattened_line_685          313738 1 +    330699 I
e Equus_przewalskii.ATBW01073585.1                          11636 1 +     92910 I
e Equus_caballus.CM000402.2                              13350146 1 +  41866177 I
e Equus_asinus.JREZ01000062.1                             5851643 1 -   7175178 I
e Enhydra_lutris.KZ291749.1                              85869858 1 +  99434291 I
e Elephantulus_edwardii.JH947210.1                        7805376 0 +  15467074 C
e Elaphurus_davidianus.JRFZ01086400.1                     1490199 1 +   1727528 I
e Eidolon_helvum.KE772537.1                                 10878 1 +     24177 I
e Echinops_telfairi.JH980316.1                           22993553 4 -  44670279 I
e Diceros_bicornis.DicBicMic_scaffold_9545                   1866 1 +    151128 I
e Dicerorhinus_sumatrensis.PEKH010003161.1                 321214 1 +    993696 I
e Desmodus_rotundus.KZ672188.1                           18697499 1 -  18957592 I
e Delphinapterus_leucas.KZ290064.1                       80035532 1 -  96802777 I
e Dasypus_novemcinctus.JH568778.1                          180892 4 -   6883506 I
e Cryptoprocta_ferox.CryFer_flattened_line_19014            50075 1 -     70449 I
e Crocidura_indochinensis.CroInd_scaffold_38409             18383 1 -     19186 I
e Craseonycteris_thonglongyai.CraTho_scaffold_22679         38301 1 -     40477 I
e Condylura_cristata.JH655880.1                          60611310 1 +  78930452 I
e Choloepus_hoffmanni.KN194586.1                           760449 6 +    964067 I
e Choloepus_didactylus.ChoDid_scaffold_36182                15138 6 -     21363 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_160623         2319 1 -      9338 I
e Catagonus_wagneri.CatWag_scaffold_1305                   157457 1 -    276539 I
e Carollia_perspicillata.CarPer_scaffold_4436               58189 1 +     67245 I
e Capra_hircus.CM004562.1                               135705153 1 - 157403528 I
e Capra_aegagrus.CM003214.1                              21323926 1 + 157394656 I
e Canis_lupus_orion.HG994411.1                           16452998 1 -  44759192 I
e Canis_lupus_familiaris.chr31                           11085974 1 +  39895921 I
e Canis_lupus_dingo.QKWQ01001993.1                       11263445 1 -  35597290 I
e Canis_lupus_VD.CanFam_VD_scaffold_16982                   11802 1 +     87036 I
e CanFam4.chr31                                          11516784 1 +  39901454 I
e Camelus_ferus.KB016973.1                                2971688 1 +   6889770 I
e Camelus_dromedarius.KN271192.1                           395955 1 -  15254737 I
e Camelus_bactrianus.KN276303.1                           3218250 1 -   8989139 I
e Bubalus_bubalis.KI419065.1                              1229670 1 -   1914593 I
e Bos_taurus.CM000177.6                                 136293915 1 - 158972876 I
e Bos_mutus.JH883513.1                                     570556 1 -    998990 I
e Bos_indicus.CM003021.1                                138138182 1 - 161108492 I
e Bison_bison.KN264915.1                                  6557943 1 +   6870073 I
e Beatragus_hunteri.BeaHun_scaffold_21644                   41912 1 -     72089 I
e Balaenoptera_bonaerensis.DF502048.1                        4083 1 -     13118 I
e Balaenoptera_acutorostrata.KI537095.1                  26378851 1 +  51448160 I
e Artibeus_jamaicensis.ArtJam_scaffold_41619                 7393 1 -     29036 I
e Antilocapra_americana.AntAmePen_scaffold_42841            29431 1 +     33004 I
e Anoura_caudifer.AnoCau_scaffold_422                      388995 1 -    631301 I
e Ammotragus_lervia.NIVO01013474.1                        3518850 1 +   4113121 I
e Ailurus_fulgens.LNAC01000003.1                          7092330 1 -  16596857 I
e Ailuropoda_melanoleuca.LNAT01000321.1                  10655405 1 +  23371972 I
e Acinonyx_jubatus.LLWD01000356.1                         2032060 1 +   3721120 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           17260 2 -    119109 I
e Glis_glis.GliGli_scaffold_79770                           10898 1 -     18683 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     13509 1 -     20485 I
e Jaculus_jaculus.JH725517.1                              8563798 1 +  11848649 I
e Allactaga_bullata.AllBul_scaffold_70162                   11045 1 -     22067 I
e Galeopterus_variegatus.GalVar_scaffold_354               154497 1 +    324696 I
e Microtus_ochrogaster.CM001673.1                        22818112 1 -  98408828 I
e Xerus_inauris.XerIna_scaffold_7898                       125271 1 -    134049 I
e Varecia_variegata.k141_775891                             23049 0 -     33872 C
e Varecia_rubra.k141_432109                                  3507 0 -     20643 C
e Tupaia_tana.TupTan_flattened_line_68454                    3156 0 +     13056 C
e Tupaia_chinensis.KB320831.1                             2790632 0 -   3938065 C
e Tarsius_wallacei.k141_48636                               58036 1 +     65473 I
e Tarsius_lariang.k141_609102                               24720 1 +     42269 I
e Spermophilus_dauricus.KZ294190.1                        2238181 1 +   2842873 I
e Sigmodon_hispidus.SigHis_scaffold_11332                   97917 1 -    120886 I
e Sapajus_macrocephalus.k141_966464                         18775 0 -     62485 C
e Sapajus_apella.ctg10                                   17339400 0 -  30362882 C
e Saimiri_ustus.k141_1282476                                 2644 0 -     76454 C
e Saimiri_sciureus.k141_1947592                              2707 0 +     60816 C
e Saimiri_oerstedii.k141_841116                              2729 0 +     67014 C
e Saimiri_macrodon.k141_2087127                              2634 0 -     60842 C
e Saimiri_cassiquiarensis.k141_808270                        2693 0 +     34089 C
e Saimiri_boliviensis.NW_024100938.1                     15670827 0 -  43202129 C
e Rattus_norvegicus.chr11                                13913690 1 +  90463843 I
e Psammomys_obesus.NESX01026517.1                           31739 2 +     77221 I
e Propithecus_verreauxi.k141_158021                         37361 0 -     48185 C
e Propithecus_tattersalli.k141_907138                       15090 0 -     53241 C
e Propithecus_perrieri.k141_7554                            15451 0 +     27322 C
e Propithecus_edwardsi.k141_1317105                         33530 0 -     44753 C
e Propithecus_diadema.k141_577245                           41141 0 +     52369 C
e Propithecus_coronatus.k141_1353159                         1806 0 +     11805 C
e Propithecus_coquerelli.NW_012147997.1                    665976 0 -   2312742 C
e Prolemur_simus.MPIZ01000048.1                           6846663 0 +  12164890 C
e Plecturocebus_moloch.k141_890597                          21388 0 -     75465 C
e Plecturocebus_miltoni.k141_841561                         10798 0 +    134592 C
e Plecturocebus_hoffmannsi.k141_1595076                      7838 0 +      8943 C
e Plecturocebus_grovesi.k141_242819                         21078 0 +    152463 C
e Plecturocebus_dubius.k141_3565563                          1725 0 -     55515 C
e Plecturocebus_cupreus.k141_1223294                        21258 0 -     23762 C
e Plecturocebus_cinerascens.k141_744510                     21009 0 +    147771 C
e Plecturocebus_caligatus.k141_2539816                      11404 0 -     98129 C
e Plecturocebus_brunneus.k141_498086                        21163 0 +     67491 C
e Plecturocebus_bernhardi.k141_959214                       20953 0 +     44506 C
e Pithecia_vanzolinii.k141_831006                           11517 0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13472609 0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          3615 0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        10306 0 -     16101 C
e Pithecia_hirsuta.k141_1152968                              7108 0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        23157 0 +     78826 C
e Pithecia_albicans.k141_991845                             41728 0 -     61926 C
e Peromyscus_maniculatus.KI615518.1                       4948321 1 -   8017169 I
e Perodicticus_potto.k141_713187                            22575 0 -     27972 C
e Perodicticus_ibeanus.k141_117958                           3277 0 -     23713 C
e Otolemur_garnettii.GL873528.1                          18006671 0 -  38779656 C
e Otolemur_crassicaudatus.k141_321880                       37229 0 +     38679 C
e Onychomys_torridus.OnyTor_scaffold_12578                  35140 1 +     62360 I
e Ondatra_zibethicus.OndZib_scaffold_6821                  123380 1 +    145789 I
e Octodon_degus.JH651621.1                                3683796 2 +  10294119 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65667871 0 +  89412551 C
e Nycticebus_coucang.k141_2051882                            2251 0 +      6470 C
e Nycticebus_bengalensis.LG16                            65565523 0 -  95554990 C
e Nannospalax_galili.KL201303.1                            108725 2 +    362372 I
e Myocastor_coypus.MyoCoy_scaffold_3653                     88304 2 -    117718 I
e Muscardinus_avellanarius.MusAve_scaffold_9643              9380 1 +     98495 I
e Mus_spretus.CM004110.1                                 74328817 1 +  97876770 I
e Mus_pahari.LT608305.1                                  67553824 1 +  89017189 I
e Mus_musculus.chr16                                     75487636 1 +  98207768 I
e Mus_caroli.LT608236.1                                  70764595 1 +  92629107 I
e Mirza_zaza.k141_226143                                     3799 0 +      8497 C
e Microcebus_murinus.CM007691.1                          16508401 0 +  47401472 C
e Mesocricetus_auratus.KB708139.1                         1044994 1 -  26018355 I
e Meriones_unguiculatus.MerUng_scaffold_52233               10199 2 +     15977 I
e Marmota_marmota.CZRN01000005.1                         36872099 1 +  64221397 I
e Macaca_tonkeana.k141_2870633                               2864 158 -     27140 T
e Macaca_nigra.k141_282495                                   2859 158 -     46448 T
e Macaca_maura.k141_251854                                  43912 158 -     79256 T
e Loris_tardigradus.ctg97                                 3776635 0 +   6799190 C
e Loris_lydekkerianus.k141_550999                            8884 0 +     84689 C
e Lepilemur_septentrionalis.k141_578524                     29795 0 -     33031 C
e Lepilemur_ruficaudatus.k141_617879                        76775 0 +    116806 C
e Lepilemur_dorsalis.k141_134267                            51531 0 +     63517 C
e Lepilemur_ankaranensis.k141_884009                        22156 0 +     39228 C
e Lemur_catta.scaffold_1                                258405287 0 - 285822530 C
e Lagothrix_lagothricha.k141_12968                          48243 0 -    147782 C
e Indri_indri.k141_1884019                                   1472 0 -      2196 C
e Ictidomys_tridecemlineatus.JH393315.1                   7124264 1 +  13083262 I
e Hystrix_cristata.HysCri_scaffold_50788                     4386 2 +     22540 I
e Heterocephalus_glaber.JH602058.1                        2549335 2 +  31725842 I
e Hapalemur_occidentalis.k141_797938                        43598 0 -     54384 C
e Hapalemur_meridionalis.k141_186231                        27004 0 -     42470 C
e Hapalemur_griseus.k141_1387522                             3727 0 +     56096 C
e Hapalemur_gilberti.k141_97962                             26267 0 +     26611 C
e Hapalemur_alaotrensis.k141_1198205                         3791 0 +      3980 C
e Graphiurus_murinus.GraMur_scaffold_4493                   75638 1 +    118900 I
e Galagoides_demidoff.k141_1769638                           8586 0 +     27357 C
e Galago_senegalensis.k141_964197                           11518 0 -     43889 C
e Galago_moholi.ctg555                                     209139 0 -    847004 C
e Fukomys_damarensis.KN123630.1                          13890946 2 -  19261668 I
e Eulemur_sanfordi.k141_186399                              14007 0 -     29447 C
e Eulemur_rufus.k141_1620292                                31284 0 +     46535 C
e Eulemur_rubriventer.k141_411740                           16555 0 +     26808 C
e Eulemur_mongoz.k141_825972                                14094 0 +     27497 C
e Eulemur_macaco.k141_1341545                               13819 0 +     16540 C
e Eulemur_fulvus.k141_653297                                 9439 0 +    109717 C
e Eulemur_flavifrons.k141_903901                             5957 0 +     60246 C
e Eulemur_coronatus.k141_3240342                             9641 0 +     36558 C
e Eulemur_collaris.k141_311830                               3166 0 -      6809 C
e Eulemur_albifrons.k141_715837                              3231 0 +     13586 C
e Ellobius_talpinus.LOJH01090055.1                           4925 1 -      7838 I
e Ellobius_lutescens.LOEQ01003611.1                        237909 1 -    369425 I
e Dolichotis_patagonum.DolPat_scaffold_14102                34351 2 -     73477 I
e Daubentonia_madagascariensis.ctg11                     16843041 0 +  31942871 C
e Dasyprocta_punctata.DasPun_flattened_line_634             57100 2 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                15999 2 +     26546 I
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 28953 2 -     67205 I
e Ctenodactylus_gundi.CteGun_scaffold_447                  206388 1 -    956709 I
e Cricetulus_griseus.LT883672.1                          53027255 1 +  72327488 I
e Cricetomys_gambianus.CriGam_scaffold_949                 276631 2 -    399297 I
e Chiropotes_sagulatus.k141_773804                          13416 0 +     40510 C
e Chiropotes_israelita.k141_1189915                         69236 0 +    196370 C
e Chinchilla_lanigera.JH721867.1                         15960004 2 +  43084221 I
e Cheracebus_torquatus.k141_315545                          44413 0 +     54541 C
e Cheracebus_regulus.k141_2128895                           39738 0 +     57117 C
e Cheracebus_lugens.k141_203936                             20699 0 +     25473 C
e Cheracebus_lucifer.k141_619653                             3676 0 -     18223 C
e Cheirogaleus_medius.k141_133808                            6226 0 +     13308 C
e Cheirogaleus_major.k141_1157592                           57184 0 -     68416 C
e Cephalopachus_bancanus.k141_702587                         6270 1 +     21754 I
e Cebus_unicolor.k141_239009                                10656 0 +     25043 C
e Cebus_olivaceus.k141_93739                                 6416 0 -     26817 C
e Cebus_albifrons.Contig22                               18888872 0 -  29618158 C
e Cavia_tschudii.CavTsc_scaffold_488                       174964 2 +    436027 I
e Cavia_porcellus.DS562889.1                             15796773 2 -  24440124 I
e Cavia_aperea.AVPZ01000278.1                            15784839 2 -  24422027 I
e Castor_canadensis.CasCan_scaffold_47037                   28681 1 +     33760 I
e Carlito_syrichta.NW_007248099.1                          307237 1 +    345090 I
e Capromys_pilorides.CapPil_scaffold_979108                   236 2 -      1248 I
e Cacajao_melanocephalus.k141_1160263                        5628 0 -    134917 C
e Cacajao_hosomi.k141_303789                                13088 0 -    216513 C
e Cacajao_calvus.k141_96166                                 11040 0 +    125063 C
e Cacajao_ayresi.k141_724503                               112014 0 -    171031 C
e Avahi_peyrierasi.k141_2689020                              1199 0 +      2719 C
e Avahi_laniger.k141_2840928                                 4880 0 -     16375 C
e Ateles_paniscus.k141_1631200                               4122 0 -     25888 C
e Ateles_marginatus.k141_899112                             62153 0 +    119057 C
e Ateles_geoffroyi_a.k141_1300742                             14162 0 -     58268 C
e Ateles_chamek.k141_1072810                                 9657 0 +     89302 C
e Ateles_belzebuth.k141_1348307                             58658 0 +     85812 C
e Ateles_geoffroyi_b.tarseq_2582                             9537374 0 +  39197703 C
e Arctocebus_calabarensis.k141_1161114                      16076 0 +     17483 C
e Aotus_vociferans.k141_718647                               4130 0 +     23246 C
e Aotus_trivirgatus.k141_1740727                             4124 0 -    104377 C
e Aotus_nancymaae.KZ196176.1                              5747539 0 +   9889416 C
e Aotus_griseimembra.k141_3275623                            3582 0 +     22701 C
e Aotus_azarae.k141_3170768                                 60641 0 +     78111 C
e Alouatta_seniculus.k141_990213                             4923 0 +      6429 C
e Alouatta_puruensis.k141_1284840                            1993 0 -      4927 C
e Alouatta_palliata.k141_1316127                             8190 0 +     10410 C
e Alouatta_nigerrima.k141_2718643                            4904 0 +      7047 C
e Alouatta_macconnelli.k141_1331706                          8248 0 -     10438 C
e Alouatta_juara.k141_298055                                  248 0 +      1823 C
e Alouatta_discolor.k141_811576                              8957 0 -     21359 C
e Alouatta_caraya.k141_5460                                  9393 0 -     11521 C
e Alouatta_belzebul.k141_1818029                             8280 0 -     18050 C
e Acomys_cahirinus.AcoCah_scaffold_1625                    110733 1 -    189883 I

a score=0.000000
s hg38.chr4_GL000008v2_random                                9990  7 +    209709 G-C----CA--------AA-A
s Acinonyx_jubatus.LLWD01000356.1                         2032061  7 +   3721120 g-a----ca--------aa-a
i Acinonyx_jubatus.LLWD01000356.1                       I 1 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    110734  7 -    189883 G-G----AA--------AA-G
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 1 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10655406  7 +  23371972 g-a----ca--------aa-a
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 1 I 1
s Ailurus_fulgens.LNAC01000003.1                          7092331  7 -  16596857 g-a----ca--------aa-a
i Ailurus_fulgens.LNAC01000003.1                        I 1 I 1
s Allactaga_bullata.AllBul_scaffold_70162                   11046  7 -     22067 G-G----AA--------AA-A
i Allactaga_bullata.AllBul_scaffold_70162               I 1 C 0
s Allenopithecus_nigroviridis.k141_3103707                  61003  7 +     61638 G-C----CA--------AA-A
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        52815  7 +     53391 G-C----CA--------AA-A
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         3540  7 +     72529 G-C----CA--------AA-A
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          3115  7 +      3797 G-C----CA--------AA-A
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3518851  7 +   4113121 G-a----ca--------aa-a
i Ammotragus_lervia.NIVO01013474.1                      I 1 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      388996  7 -    631301 G-A----CA--------AA-A
i Anoura_caudifer.AnoCau_scaffold_422                   I 1 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            29432  7 +     33004 G-A----CA--------AA-A
i Antilocapra_americana.AntAmePen_scaffold_42841        I 1 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     2139  7 +      5067 A-A----AA--------AA-T
i Aplodontia_rufa.AprRuf_scaffold_156013                I 1 C 0
s Arctocebus_calabarensis.k141_1161114                      16076  7 +     17483 G-A----CA--------AA-A
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 7394  7 -     29036 G-A----CA--------AA-A
i Artibeus_jamaicensis.ArtJam_scaffold_41619            I 1 I 6
s Avahi_laniger.k141_2840928                                 4880  7 -     16375 G-A----CA--------AA-A
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              1199  7 +      2719 G-A----CA--------AA-A
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26378852  7 +  51448160 g-a----ca--------aa-a
i Balaenoptera_acutorostrata.KI537095.1                 I 1 C 0
s Balaenoptera_bonaerensis.DF502048.1                        4084  7 -     13118 g-a----ca--------aa-a
i Balaenoptera_bonaerensis.DF502048.1                   I 1 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   41913  7 -     72089 G-A----CA--------AA-A
i Beatragus_hunteri.BeaHun_scaffold_21644               I 1 C 0
s Bison_bison.KN264915.1                                  6557944  7 +   6870073 g-a----ca--------aa-a
i Bison_bison.KN264915.1                                I 1 C 0
s Bos_indicus.CM003021.1                                138138183  7 - 161108492 G-a----ca--------aa-a
i Bos_indicus.CM003021.1                                I 1 C 0
s Bos_mutus.JH883513.1                                     570557  7 -    998990 g-a----ca--------aa-a
i Bos_mutus.JH883513.1                                  I 1 C 0
s Bos_taurus.CM000177.6                                 136293916  7 - 158972876 G-a----ca--------aa-a
i Bos_taurus.CM000177.6                                 I 1 C 0
s Bubalus_bubalis.KI419065.1                              1229671  7 -   1914593 g-a----ca--------aa-a
i Bubalus_bubalis.KI419065.1                            I 1 C 0
s Camelus_bactrianus.KN276303.1                           3218251  7 -   8989139 g-a----ca--------aa-a
i Camelus_bactrianus.KN276303.1                         I 1 C 0
s Camelus_dromedarius.KN271192.1                           395956  7 -  15254737 g-a----ca--------aa-a
i Camelus_dromedarius.KN271192.1                        I 1 C 0
s Camelus_ferus.KB016973.1                                2971689  7 +   6889770 g-a----ca--------aa-a
i Camelus_ferus.KB016973.1                              I 1 C 0
s CanFam4.chr31                                          11516785  7 +  39901454 G-A----CA--------AA-A
i CanFam4.chr31                                         I 1 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   11803  7 +     87036 G-A----CA--------AA-A
i Canis_lupus_VD.CanFam_VD_scaffold_16982               I 1 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11263446  7 -  35597290 G-A----CA--------AA-A
i Canis_lupus_dingo.QKWQ01001993.1                      I 1 C 0
s Canis_lupus_familiaris.chr31                           11085975  7 +  39895921 G-A----CA--------AA-A
i Canis_lupus_familiaris.chr31                          I 1 C 0
s Canis_lupus_orion.HG994411.1                           16452999  7 -  44759192 G-A----CA--------AA-A
i Canis_lupus_orion.HG994411.1                          I 1 C 0
s Capra_aegagrus.CM003214.1                              21323927  7 + 157394656 g-a----ca--------aa-a
i Capra_aegagrus.CM003214.1                             I 1 C 0
s Capra_hircus.CM004562.1                               135705154  7 - 157403528 g-a----ca--------aa-a
i Capra_hircus.CM004562.1                               I 1 C 0
s Capromys_pilorides.CapPil_scaffold_979108                   238  5 -      1248 -------CA--------AA-A
i Capromys_pilorides.CapPil_scaffold_979108             I 2 I 3
s Carlito_syrichta.NW_007248099.1                          307238  7 +    345090 G-A----CA--------AA-A
i Carlito_syrichta.NW_007248099.1                       I 1 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               58190  7 +     67245 G-A----CA--------AA-A
i Carollia_perspicillata.CarPer_scaffold_4436           I 1 C 0
s Castor_canadensis.CasCan_scaffold_47037                   28682  6 +     33760 T-G----AA--------AA--
i Castor_canadensis.CasCan_scaffold_47037               I 1 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   157458  7 -    276539 G-A----CA--------AA-A
i Catagonus_wagneri.CatWag_scaffold_1305                I 1 C 0
s Cavia_aperea.AVPZ01000278.1                            15784841  5 -  24422027 -------AA--------AA-A
i Cavia_aperea.AVPZ01000278.1                           I 2 C 0
s Cavia_porcellus.DS562889.1                             15796775  5 -  24440124 -------aa--------aa-a
i Cavia_porcellus.DS562889.1                            I 2 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       174966  5 +    436027 -------AA--------AA-A
i Cavia_tschudii.CavTsc_scaffold_488                    I 2 C 0
s Cephalopachus_bancanus.k141_702587                         6271  7 +     21754 G-A----CA--------AA-A
i Cephalopachus_bancanus.k141_702587                    I 1 C 0
s Ceratotherium_simum.JH767818.1                          4362568  7 +   7569818 G-A----CA--------AG-A
i Ceratotherium_simum.JH767818.1                        I 1 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         2320  7 -      9338 G-A----CA--------AG-A
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    I 1 C 0
s Cercocebus_atys.KQ010443.1                              6552799  7 +   6739814 G-C----CA--------AA-A
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      54276  7 -     54931 G-C----CA--------AA-A
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         19260  7 -     19697 G-C----CA--------AA-A
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         56791  7 -    107033 G-C----CA--------AA-A
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        3231  7 -      3853 G-C----CA--------AA-A
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          27162  7 +     30494 G-C----CA--------AA-A
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           3191  7 -      4022 G-C----CA--------AA-A
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          3080  7 -      3505 G-C----CA--------AA-A
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           21868  7 +     35983 G-C----CA--------AA-A
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11988405  7 +  12117833 G-C----CA--------AA-A
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46475158  7 +  46592721 G-C----CA--------AA-A
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      32987  7 +     33420 G-C----CA--------AA-A
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        3021  7 -      3443 G-C----CA--------AA-A
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      4019  7 -      4669 G-C----CA--------AA-A
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        3807  7 -      4411 G-C----CA--------AA-A
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         3342  7 -      4205 G-C----CA--------AA-A
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_2711798           354  8 -       616 G-A----CAA-------AT-A
i Chaetophractus_vellerosus.ChaVel_scaffold_2711798     I 4 C 0
s Cheirogaleus_major.k141_1157592                           57184  7 -     68416 G-A----CA--------AA-A
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            6226  7 +     13308 G-A----CA--------AA-A
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15960006  5 +  43084221 -------aa--------aa-a
i Chinchilla_lanigera.JH721867.1                        I 2 C 0
s Chlorocebus_aethiops.ctg22                             15136626  7 -  15256731 G-C----CA--------AA-A
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      31672  7 -     53260 G-C----CA--------AA-A
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101142121  7 + 101219884 G-C----CA--------AA-A
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                15144  8 -     21363 G-A----TGA-------AT-A
i Choloepus_didactylus.ChoDid_scaffold_36182            I 6 C 0
s Choloepus_hoffmanni.KN194586.1                           760455  8 +    964067 g-a----tgA-------AT-A
i Choloepus_hoffmanni.KN194586.1                        I 6 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_141308              8805  6 -     12508 -------ca-------gaa-a
i Chrysochloris_asiatica.ChrAsi_scaffold_141308         I 1700 C 0
s Colobus_angolensis.KN985967.1                          10880700  7 +  10971483 G-C----CA--------AA-A
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147661857  7 + 156195979 G-T----CA--------AA-A
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            13845  7 +     23629 G-C----CA--------AA-A
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60611311  8 +  78930452 GAT----AG--------TA-T
i Condylura_cristata.JH655880.1                         I 1 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         38302  7 -     40477 A-A----CA--------AA-A
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     I 1 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 276633  5 -    399297 -------AA--------AA-A
i Cricetomys_gambianus.CriGam_scaffold_949              I 2 C 0
s Cricetulus_griseus.LT883672.1                          53027256  8 +  72327488 G-GGAA-A----------A-A
i Cricetulus_griseus.LT883672.1                         I 1 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             18384  8 -     19186 AAT----TA--------TT-A
i Crocidura_indochinensis.CroInd_scaffold_38409         I 1 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            50076  7 -     70449 G-A----CA--------AA-A
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 1 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  206389  7 -    956709 T-G----AA--------AA-A
i Ctenodactylus_gundi.CteGun_scaffold_447               I 1 I 21
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 28955  5 -     67205 -------GA--------AA-A
i Ctenomys_sociabilis.CteSoc_scaffold_19489             I 2 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                16001  5 +     26546 -------AA--------AA-G
i Cuniculus_paca.CunPac_flattened_line_16637            I 2 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             57102  5 -    236241 -------AA--------AA-A
i Dasyprocta_punctata.DasPun_flattened_line_634         I 2 C 0
s Dasypus_novemcinctus.JH568778.1                          180896  8 -   6883506 G-A----CAA-------AT-A
i Dasypus_novemcinctus.JH568778.1                       I 4 C 0
s Daubentonia_madagascariensis.ctg11                     16843041  7 +  31942871 G-A----CA--------AA-A
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80035533  7 -  96802777 g-a----ca--------aa-a
i Delphinapterus_leucas.KZ290064.1                      I 1 C 0
s Desmodus_rotundus.KZ672188.1                           18697500  7 -  18957592 g-a----ta--------aa-a
i Desmodus_rotundus.KZ672188.1                          I 1 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 321215  7 +    993696 G-A----CA--------AG-A
i Dicerorhinus_sumatrensis.PEKH010003161.1              I 1 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   1867  7 +    151128 G-A----CA--------AG-A
i Diceros_bicornis.DicBicMic_scaffold_9545              I 1 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   155890  5 +    228994 -------AA--------AA-A
i Dinomys_branickii.DinBra_scaffold_1996                I 2 C 0
s Dipodomys_ordii.KN672545.1                              3653600  7 +   4240102 a-a----aa--------aa-a
i Dipodomys_ordii.KN672545.1                            I 1 I 1
s Dipodomys_stephensi.DipSte_scaffold_44365                 25164  7 +     28912 A-A----AA--------AA-A
i Dipodomys_stephensi.DipSte_scaffold_44365             I 1 I 1
s Dolichotis_patagonum.DolPat_scaffold_14102                34353  5 -     73477 -------AA--------AA-A
i Dolichotis_patagonum.DolPat_scaffold_14102            I 2 C 0
s Echinops_telfairi.JH980316.1                           22993557  8 -  44670279 G-A----CAA-------AT-A
i Echinops_telfairi.JH980316.1                          I 4 C 0
s Eidolon_helvum.KE772537.1                                 10879  7 +     24177 g-a----ca--------aa-a
i Eidolon_helvum.KE772537.1                             I 1 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1490200  7 +   1727528 g-a----aa--------aa-a
i Elaphurus_davidianus.JRFZ01086400.1                   I 1 C 0
s Ellobius_lutescens.LOEQ01003611.1                        237910  9 -    369425 G-G-AAGAG--------A--A
i Ellobius_lutescens.LOEQ01003611.1                     I 1 C 0
s Ellobius_talpinus.LOJH01090055.1                           4926  9 -      7838 g-gaAG-AA--------A--A
i Ellobius_talpinus.LOJH01090055.1                      I 1 C 0
s Enhydra_lutris.KZ291749.1                              85869859  7 +  99434291 g-a----ca--------aa-a
i Enhydra_lutris.KZ291749.1                             I 1 I 1
s Eptesicus_fuscus.JH977687.1                             4702453  7 +   6522550 g-a----ta--------aa-a
i Eptesicus_fuscus.JH977687.1                           I 1 C 0
s Equus_asinus.JREZ01000062.1                             5851644  7 -   7175178 G-A----CA--------Ag-a
i Equus_asinus.JREZ01000062.1                           I 1 C 0
s Equus_caballus.CM000402.2                              13350147  7 +  41866177 G-A----CA--------Ag-a
i Equus_caballus.CM000402.2                             I 1 C 0
s Equus_przewalskii.ATBW01073585.1                          11637  7 +     92910 G-A----CA--------Ag-a
i Equus_przewalskii.ATBW01073585.1                      I 1 C 0
s Erinaceus_europaeus.JH835290.1                         11531187 13 +  16010500 -------CAATATTAGCag-g
i Erinaceus_europaeus.JH835290.1                        I 3 C 0
s Erythrocebus_patas.Contig8                             48768804  7 -  48907691 G-C----CA--------AA-A
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          313739  7 +    330699 G-A----CA--------AA-A
i Eschrichtius_robustus.EscRob_flattened_line_685       I 1 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             60191  7 +     89355 G-A----CA--------AA-A
i Eubalaena_japonica.EubJap_flattened_line_7756         I 1 C 0
s Eulemur_albifrons.k141_715837                              3231  7 +     13586 G-A----CA--------AA-A
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               3166  7 -      6809 G-A----CA--------AA-A
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             9641  7 +     36558 G-A----CA--------AA-A
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             5957  7 +     60246 G-A----CA--------AA-A
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 9439  7 +    109717 G-A----CA--------AA-A
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               13819  7 +     16540 G-A----CA--------AA-A
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                14094  7 +     27497 G-A----CA--------AA-A
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           16555  7 +     26808 G-A----CA--------AA-A
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                31284  7 +     46535 G-A----CA--------AA-A
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              14007  7 -     29447 G-A----CA--------AA-A
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129891037  7 - 159252932 g-a----ca--------aa-a
i Felis_catus.CM001386.2                                I 1 C 0
s Felis_catus_fca126.CM031420.1                         129278109  7 - 158578461 g-a----ca--------aa-a
i Felis_catus_fca126.CM031420.1                         I 1 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 19244  7 +     52776 G-A----CA--------AA-A
i Felis_nigripes.FelNig_flattened_line_8080             I 1 C 0
s Fukomys_damarensis.KN123630.1                          13890948  5 -  19261668 -------AA--------AA-A
i Fukomys_damarensis.KN123630.1                         I 2 C 0
s Galago_moholi.ctg555                                     209139  7 -    847004 G-A----CA--------AA-A
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           11518  7 -     43889 G-A----CA--------AA-A
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           8586  7 +     27357 G-A----CA--------AA-A
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               154498  7 +    324696 G-A----CA--------AA-A
i Galeopterus_variegatus.GalVar_scaffold_354            I 1 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    180000  7 -    189561 g-a----ca--------aa-a
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 1 C 0
s Glis_glis.GliGli_scaffold_79770                           10899  7 -     18683 G-G----AA--------AA-A
i Glis_glis.GliGli_scaffold_79770                       I 1 C 0
s Gorilla_beringei.k141_111300                               3388  7 -     14630 G-C----CA--------AA-A
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119650487  7 - 195582420 G-C----CA--------AA-A
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   75639  7 +    118900 G-G----AA--------AA-A
i Graphiurus_murinus.GraMur_scaffold_4493               I 1 C 0
s Hapalemur_alaotrensis.k141_1198205                         3791  7 +      3980 G-A----CA--------AA-A
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             26267  7 +     26611 G-A----CA--------AA-A
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             3727  7 +     56096 G-A----CA--------AA-A
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        27004  7 -     42470 G-A----CA--------AA-A
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        43598  7 -     54384 G-A----CA--------AA-A
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              15284  7 +     53719 G-A----CA--------AA-A
i Helogale_parvula.HelPar_flattened_line_22962          I 1 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                26199  7 -     91191 G-A----CA--------AA-A
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 1 C 0
s Heterocephalus_glaber.JH602058.1                        2549337  5 +  31725842 -------aa--------aa-a
i Heterocephalus_glaber.JH602058.1                      I 2 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               55752  7 +     73687 G-A----CT--------AT-A
i Heterohyrax_brucei.HetBruBak_scaffold_25354           I 4 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              145768  7 +    277961 G-A----CA--------AA-A
i Hippopotamus_amphibius.HipAmp_scaffold_1308           I 1 C 0
s Hipposideros_armiger.JXIK01001085.1                      277084  7 -    477199 g-a----ca--------aa-a
i Hipposideros_armiger.JXIK01001085.1                   I 1 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              6243  7 -      9143 G-A----CA--------AA-A
i Hipposideros_galeritus.HipGal_scaffold_104691         I 1 C 0
s Hoolock_leuconedys.ctg79                                      2635  7 -   7690867 G-C----CA--------AA-A
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 14379  7 -     67322 G-A----CA--------AA-A
i Hyaena_hyaena.HyaHya_flattened_line_20729             I 1 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           17262  5 -    119109 -------AA--------AA-A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       I 2 C 0
s Hylobates_abbotti.k141_493872                              3200  7 +      5897 G-C----CA--------AA-A
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_1485652                              1620  7 -      1697 G-C----CA--------AA-A
i Hylobates_agilis.k141_1485652                         C 0 C 0
s Hylobates_klossii.k141_466549                              9644  7 +     11537 G-C----CA--------AA-A
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14622745  7 -  25970782 G-C----CA--------AA-A
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                               1  7 -      2977 G-C----CA--------AA-A
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             32132  7 -     60944 G-C----CA--------AA-A
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     4388  5 +     22540 -------AA--------GA-A
i Hystrix_cristata.HysCri_scaffold_50788                I 2 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7124265  7 +  13083262 g-a----aa--------aa-t
i Ictidomys_tridecemlineatus.JH393315.1                 I 1 C 0
s Indri_indri.k141_1884019                                   1472  7 -      2196 G-A----CA--------AA-A
i Indri_indri.k141_1884019                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               7521  7 +     17520 G-A----CA--------AA-A
i Inia_geoffrensis.IniGeo_flattened_line_66725          I 1 C 0
s Jaculus_jaculus.JH725517.1                              8563799  7 +  11848649 t-g----aa--------aa-a
i Jaculus_jaculus.JH725517.1                            I 1 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               22351  7 +     37189 G-A----CA--------AA-A
i Kogia_breviceps.KogBre_flattened_line_35920           I 1 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   112249  7 -    115756 G-A----TA--------AA-A
i Lasiurus_borealis.LasBor_scaffold_5102                I 1 C 0
s Lemur_catta.scaffold_1                                258405287  7 - 285822530 G-A----CA--------AA-A
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        22156  7 +     39228 G-A----CA--------AA-A
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            51531  7 +     63517 G-A----CA--------AA-A
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        76775  7 +    116806 G-A----CA--------AA-A
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     29795  7 -     33031 G-A----CA--------AA-A
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3084076  7 -   3498232 t-a----ca--------aa-a
i Leptonychotes_weddellii.KB714749.1                    I 1 I 1
s Lepus_americanus.LepAme_scaffold_62849                    11254  7 +     22452 G-A----AA--------AA-A
i Lepus_americanus.LepAme_scaffold_62849                I 1 C 0
s Lipotes_vexillifer.KE558548.1                            134686  7 +   3060487 g-a----ca--------aa-a
i Lipotes_vexillifer.KE558548.1                         I 1 C 0
s Lophocebus_aterrimus.ctg55                             19245887  7 +  19376315 G-C----CA--------AA-A
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            8884  7 +     84689 G-A----CA--------AA-A
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3776635  7 +   6799190 G-A----CA--------AA-A
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20590397  8 -  62548349 G-A----CAA-------AC-A
i Loxodonta_africana.GL010040.1                         I 4 C 0
s Lycaon_pictus.CM007556.1                               11085431  7 +  39895028 g-a----ca--------aa-a
i Lycaon_pictus.CM007556.1                              I 1 C 0
s Macaca_arctoides.k141_2201161                             17563  7 +     74745 G-C----CA--------AA-A
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12704073  7 +  12821369 G-C----CA--------AA-A
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               6169  7 +      6569 G-C----CA--------AA-A
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           44471  7 +     63263 G-C----CA--------AA-A
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_925451                                  479  7 +     10231 G-C----CA--------AA-A
i Macaca_fuscata.k119_925451                            C 0 C 0
s Macaca_leonina.k141_3421209                                2620  7 +      3017 G-C----CA--------AA-A
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_mulatta.NC_041755.1                            196033150  7 + 196197964 G-C----CA--------AA-A
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11443256  7 +  11645122 G-C----CA--------AA-A
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_radiata.k141_1580474                                3012  7 -      3617 G-C----CA--------AA-A
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 13342  7 -     55006 G-C----CA--------AA-A
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43838379  7 +  43892939 G-C----CA--------AA-A
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                5601  7 -      5978 G-C----CA--------AA-A
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                700295  6 +    802869 C-A----G---------AA-A
i Macroglossus_sobrinus.MacSob_scaffold_879             I 1 C 0
s Mandrillus_leucophaeus.scaffold125                     43435049  7 -  43563597 G-C----CA--------AA-A
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4447875  7 -   4543643 G-C----CA--------AA-A
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            144788  7 +    252755 g-g----ca--------aa-a
i Manis_javanica.JSZB01003966.1                         I 1 C 0
s Manis_pentadactyla.KN017078.1                             34863  7 +     58827 G-g----ca--------aa-a
i Manis_pentadactyla.KN017078.1                         I 1 C 0
s Marmota_marmota.CZRN01000005.1                         36872100  7 +  64221397 G-A----AA--------AA-T
i Marmota_marmota.CZRN01000005.1                        I 1 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       62949  7 -    234502 G-A----CA--------AA-A
i Megaderma_lyra.MegLyr_scaffold_3562                   I 1 C 0
s Mellivora_capensis.MelCap_flattened_line_146202             669  7 -      1999 G-A----CA--------AA-A
i Mellivora_capensis.MelCap_flattened_line_146202       I 1 I 1
s Mesocricetus_auratus.KB708139.1                         1044995  8 -  26018355 G-GAAA-A----------A-A
i Mesocricetus_auratus.KB708139.1                       I 1 C 0
s Microcebus_murinus.CM007691.1                          16508401  7 +  47401472 G-A----CA--------AA-A
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  29983  8 -     48017 G-A----CAA-------AT-A
i Microgale_talazaci.MicTal_scaffold_34660              I 4 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               21375  7 -     32043 G-A----CA--------AA-A
i Micronycteris_hirsuta.MicHir_scaffold_37978           I 1 C 0
s Microtus_ochrogaster.CM001673.1                        22818113  9 -  98408828 G-G-AAGAA--------A--A
i Microtus_ochrogaster.CM001673.1                       I 1 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8208123  7 +  10048721 g-a----aa--------aa-a
i Miniopterus_natalensis.LDJU01000022.1                 I 1 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            32795  7 +     45743 G-A----AA--------AA-A
i Miniopterus_schreibersii.MinSch_scaffold_24116        I 1 C 0
s Miopithecus_ogouensis.k141_2666161                        33704  7 +     34273 G-C----CA--------AA-A
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         9382  7 -    104932 T-A----CA--------AA-A
i Mirounga_angustirostris.MirAng_flattened_line_8852    I 1 I 203
s Mirza_zaza.k141_226143                                     3799  7 +      8497 G-A----CA--------AA-A
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 145121  7 +    154973 G-A----CA--------AA-A
i Monodon_monoceros.MonMon_M_scaffold_5598              I 1 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                159881  7 +    265003 G-A----TA--------AC-A
i Mormoops_blainvillei.MorMeg_scaffold_2952             I 1 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 3302  7 -      4346 G-A----CA--------AA-A
i Moschus_moschiferus.MosMos_scaffold_146101            I 1 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  142975  7 -    168139 G-A----CA--------AA-A
i Mungos_mungo.MunMun_flattened_line_8729               I 1 C 0
s Murina_feae.MurFea_scaffold_2254                          17760  7 -    100666 G-A----TA--------AA-A
i Murina_feae.MurFea_scaffold_2254                      I 1 C 0
s Mus_caroli.LT608236.1                                  70764596  6 +  92629107 G-G----AA--------AA--
i Mus_caroli.LT608236.1                                 I 1 C 0
s Mus_musculus.chr16                                     75487637  7 +  98207768 G-G----AA--------AA-G
i Mus_musculus.chr16                                    I 1 C 0
s Mus_pahari.LT608305.1                                  67553825  7 +  89017189 G-G----AA--------AA-G
i Mus_pahari.LT608305.1                                 I 1 C 0
s Mus_spretus.CM004110.1                                 74328818  7 +  97876770 G-G----AA--------AA-G
i Mus_spretus.CM004110.1                                I 1 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              9381  7 +     98495 G-G----AA--------AA-A
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 1 C 0
s Mustela_putorius.JH417978.1                             4422241  7 -  28371801 g-a----ca--------aa-a
i Mustela_putorius.JH417978.1                           I 1 I 1
s Myocastor_coypus.MyoCoy_scaffold_3653                     88306  5 -    117718 -------CA--------AA-A
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 2 C 0
s Myotis_brandtii.KE161952.1                               966085  7 +   8389877 g-a----ta--------aa-a
i Myotis_brandtii.KE161952.1                            I 1 C 0
s Myotis_davidii.KB114863.1                               5017774  7 +   6462685 g-a----ta--------aa-a
i Myotis_davidii.KB114863.1                             I 1 C 0
s Myotis_lucifugus.GL429887.1                             3463671  7 -   3747815 g-a----ta--------aa-a
i Myotis_lucifugus.GL429887.1                           I 1 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         8865  7 +     66751 G-A----TA--------AA-A
i Myotis_myotis.MyoMyo_scaffold_6123                    I 1 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3744  8 -      8794 G-A----TGA-------AT-G
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        I 4 C 0
s Nannospalax_galili.KL201303.1                            108727  4 +    362372 --------A--------TA-A
i Nannospalax_galili.KL201303.1                         I 2 C 0
s Nasalis_larvatus.k141_153429                               6079  7 +     48152 G-C----CA--------AA-A
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4482976  7 -  14209539 t-a----ca--------aa-a
i Neomonachus_schauinslandi.NINY01007774.1              I 1 I 1
s Neophocaena_asiaeorientalis.KZ688543.1                  3949734  7 -   4490290 g-a----ca--------aa-a
i Neophocaena_asiaeorientalis.KZ688543.1                I 1 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  47988  7 +     94413 G-A----CA--------AA-A
i Noctilio_leporinus.NocLep_scaffold_12062              I 1 C 0
s Nomascus_annamensis.k141_302224                              49  7 +      1516 G-C----CA--------AA-A
i Nomascus_annamensis.k141_302224                       C 0 C 0
s Nomascus_concolor.k141_49591                               1170  7 +      2014 G-C----CA--------AA-A
i Nomascus_concolor.k141_49591                          C 0 C 0
s Nomascus_gabriellae.k141_642452                              95  7 +      2851 G-C----CA--------AA-A
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             22974  7 -  18771707 G-C----CA--------AA-A
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                   723  7 +      4512 G-C----CA--------AA-A
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                28424  7 +   3668941 g-a----ca--------aa-a
i Nyctereutes_procyonoides.CAJHUB010000786.1            I 1 C 0
s Nycticebus_bengalensis.LG16                            65565523  7 -  95554990 G-A----CA--------AA-A
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            2251  7 +      6470 G-A----CA--------AA-A
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65667871  7 +  89412551 G-A----CA--------AA-A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4994235  7 -  23139505 G-T----TA--------AA-A
i Ochotona_princeps.JH802095.1                          I 1 C 0
s Octodon_degus.JH651621.1                                3683798  5 +  10294119 -------aa--------aa-a
i Octodon_degus.JH651621.1                              I 2 C 0
s Odobenus_rosmarus.KB229369.1                             677626  7 -   3126709 t-a----ca--------aa-a
i Odobenus_rosmarus.KB229369.1                          I 1 I 1
s Odocoileus_virginianus.KZ101650.1                       1078430  7 +   1425656 g-a----ca--------aa-a
i Odocoileus_virginianus.KZ101650.1                     I 1 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         35725  7 +     78940 G-a----ca--------aa-a
i Okapia_johnstoni.LVCL01S0017931.1                     I 1 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  123381  9 +    145789 G-G-AAGAA--------A--A
i Ondatra_zibethicus.OndZib_scaffold_6821               I 1 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  35141 10 +     62360 G-G-AAGAA--------AA-T
i Onychomys_torridus.OnyTor_scaffold_12578              I 1 C 0
s Orcinus_orca.KB316965.1                                 7223418  7 -   7562323 g-a----ca--------aa-a
i Orcinus_orca.KB316965.1                               I 1 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              42335  8 -     66828 G-A----CA------G-AA-A
i Orycteropus_afer.OryAfe_flattened_line_13509          I 4 C 0
s Oryctolagus_cuniculus.CM000803.1                      141873918  7 + 163896628 G-A----CA--------AA-A
i Oryctolagus_cuniculus.CM000803.1                      I 1 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      305762  7 -    505867 G-A----CA--------AA-A
i Otocyon_megalotis.JAEUCK010005121.1                   I 1 C 0
s Otolemur_crassicaudatus.k141_321880                       37229  7 +     38679 G-A----CA--------AA-A
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18006671  7 -  38779656 g-a----ca--------aa-a
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134075992  7 - 275406953 g-a----ca--------aa-a
i Ovis_aries.CM001582.2                                 I 1 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      77206  7 +    140051 G-A----CA--------AA-A
i Ovis_canadensis.OviCan_scaffold_6251                  I 1 C 0
s Pan_paniscus.CM003386.1                               127572732  7 - 205426864 G-C----CA--------AA-A
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120149885  7 - 196562556 G-C----CA--------AA-A
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  32439  7 +    295523 G-A----CA--------AA-A
i Panthera_onca.PanOnc_flattened_line_1615              I 1 C 0
s Panthera_pardus.KV860323.1                              3636173  7 +  18214204 g-a----ca--------aa-a
i Panthera_pardus.KV860323.1                            I 1 C 0
s Panthera_tigris.KE721879.1                              5025820  7 -   6340057 g-a----ca--------aa-a
i Panthera_tigris.KE721879.1                            I 1 C 0
s Pantholops_hodgsonii.KE114631.1                         1064853  7 -   1292953 G-g----ca--------aa-a
i Pantholops_hodgsonii.KE114631.1                       I 1 C 0
s Papio_anubis.CM001492.2                               188153831  7 - 188283584 G-C----CA--------AA-A
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            50043  7 +     76494 G-C----CA--------AA-A
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47511228  7 +  47705337 G-C----CA--------AA-A
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 65205  7 -    104429 G-C----CA--------AA-A
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  14996  7 -     29451 G-C----CA--------AA-A
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                35399  7 +     35859 G-C----CA--------AA-A
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113736  6 -    135482 --A----CA--------AA-A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 I 1 C 0
s Perodicticus_ibeanus.k141_117958                           3277  7 -     23713 G-A----CA--------AA-A
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            22575  7 -     27972 G-A----CA--------AA-A
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      41175  5 -     45160 -------AA--------GT-A
i Perognathus_longimembris.PerPac_flattened_line_22291  I 39 I 1
s Peromyscus_maniculatus.KI615518.1                       4948322 10 -   8017169 A-G-AAGAA--------GA-T
i Peromyscus_maniculatus.KI615518.1                     I 1 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    10492  5 -     36578 -------AA--------AA-A
i Petromus_typicus.PetTyp_scaffold_33007                I 2 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            120035  7 -    122454 G-A----CA--------AA-A
i Phocoena_phocoena.PhoPho_flattened_line_11948         I 1 C 0
s Piliocolobus_badius.k141_1497351                           3085  7 -      3310 G-C----CA--------AA-A
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       22990  7 -     82327 G-C----CA--------AA-A
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           19737  7 +     19957 G-C----CA--------AA-A
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26737751  7 +  26888534 G-C----CA--------AA-A
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            95528  7 +    112873 G-A----TA--------AA-A
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        I 1 I 7
s Platanista_gangetica.PlaMin_flattened_line_72990           4101  7 +     21690 G-A----CA--------AA-A
i Platanista_gangetica.PlaMin_flattened_line_72990      I 1 C 0
s Pongo_abelii.NDHI03003816.1                              185276  7 -    373494 G-C----CA--------AA-A
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19805184  7 +  19899266 G-C----CA--------AA-A
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               3323  7 -     15069 G-C----CA--------AA-A
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              3457  7 +     14865 G-C----CA--------AA-A
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                75623  7 +     78963 G-A----CT--------AT-A
i Procavia_capensis.ProCapCap_scaffold_15315            I 4 C 0
s Prolemur_simus.MPIZ01000048.1                           6846663  7 +  12164890 G-A----CA--------AA-A
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    665976  7 -   2312742 g-a----ca--------aa-a
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         1806  7 +     11805 G-A----CA--------AA-A
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           41141  7 +     52369 G-A----CA--------AA-A
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         33530  7 -     44753 G-A----CA--------AA-A
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            15451  7 +     27322 G-A----CA--------AA-A
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       15090  7 -     53241 G-A----CA--------AA-A
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         37361  7 -     48185 G-A----CA--------AA-A
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Pteronotus_parnellii.KE867983.1                            2550  7 -     27784 g-a----ca--------ac-a
i Pteronotus_parnellii.KE867983.1                       I 1 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        244335  7 -    344369 G-A----CA--------AA-A
i Pteronura_brasiliensis.PteBra_flattened_line_1343     I 1 I 1
s Pteropus_alecto.KB031157.1                             13244680  7 -  17261082 g-a----ca--------aa-a
i Pteropus_alecto.KB031157.1                            I 1 C 0
s Pteropus_vampyrus.KN525959.1                             602630  7 -   3946241 g-a----ca--------aa-a
i Pteropus_vampyrus.KN525959.1                          I 1 C 0
s Puma_concolor.QAVW01000427.1                          131532402  7 - 161321710 g-a----ca--------aa-a
i Puma_concolor.QAVW01000427.1                          I 1 C 0
s Pygathrix_cinerea.k141_374971                             27448  7 +     56732 G-C----CA--------AC-A
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6803939  7 +   6970761 G-C----CA--------AC-A
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             3332  8 +     18040 GCC----CA--------AC-A
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                14507  7 +     68503 G-A----CA--------AA-A
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 1 C 0
s Rattus_norvegicus.chr11                                13913691  7 +  90463843 G-G----AA--------AA-G
i Rattus_norvegicus.chr11                               I 1 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1786494  7 +   2252614 g-a----ca--------aa-a
i Rhinolophus_sinicus.LVEH01000179.1                    I 1 C 0
s Rhinopithecus_bieti.k119_102124                           13885  7 -     14454 G-C----CA--------AA-A
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206375211  7 - 206558726 G-C----CA--------AA-A
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44854111  7 -  45163003 G-C----CA--------AA-A
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                17970  7 +    109198 G-A----CA--------AA-A
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            I 1 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       6309  7 +     12214 G-A----CA--------AA-A
i Saiga_tatarica.SaiTat_scaffold_82192                  I 1 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   30062  8 -    114521 GAT----AA--------TA-A
i Scalopus_aquaticus.ScaAqu_scaffold_9300               I 1 C 0
s Semnopithecus_entellus.k141_1527475                       25875  7 +     26421 G-C----CA--------AA-A
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       6335  7 +     20762 G-C----CA--------AA-A
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         40070  7 +     40653 G-C----CA--------AA-A
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                           10627  7 -     12194 G-C----CA--------AA-A
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     24049  7 -     27512 G-C----CA--------AA-A
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         33064  7 -     33692 G-C----CA--------AA-A
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   97918  9 -    120886 G-A-AAGAA--------AA--
i Sigmodon_hispidus.SigHis_scaffold_11332               I 1 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            16686  8 +    739146 AAA----CA--------AA-A
i Solenodon_paradoxus.SolPar_flattened_line_1012        I 1 C 0
s Spermophilus_dauricus.KZ294190.1                        2238182  7 +   2842873 g-a----aa--------aa-t
i Spermophilus_dauricus.KZ294190.1                      I 1 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             233087  7 -    276980 G-A----CA--------AA-A
i Spilogale_gracilis.SpiGra_flattened_line_905          I 1 I 1
s Suricata_suricatta.SurSur_flattened_line_20339            25641  7 +     62062 G-A----CA--------AA-A
i Suricata_suricatta.SurSur_flattened_line_20339        I 1 C 0
s Sus_scrofa.CM000824.4                                 189270555  7 + 218635234 g-a----ca--------aa-a
i Sus_scrofa.CM000824.4                                 I 1 C 0
s Symphalangus_syndactylus.tarseq_24                        13002  7 -  13920577 G-C----CA--------AA-A
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               13419  8 +     45698 A-A----TGA-------AT-G
i Tamandua_tetradactyla.TamTet_scaffold_26877           I 6 C 0
s Tapirus_indicus.TapInd_scaffold_176                      805420  7 +   1148477 G-A----CA--------AG-A
i Tapirus_indicus.TapInd_scaffold_176                   I 1 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  56080  7 +     99546 G-A----CA--------AG-A
i Tapirus_terrestris.TapTer_scaffold_14939              I 1 C 0
s Tarsius_lariang.k141_609102                               24721  7 +     42269 G-A----CA--------AA-A
i Tarsius_lariang.k141_609102                           I 1 C 0
s Tarsius_wallacei.k141_48636                               58037  7 +     65473 G-A----CA--------AA-A
i Tarsius_wallacei.k141_48636                           I 1 C 0
s Theropithecus_gelada.CM009951.1                       194005367  7 - 194193292 G-C----CA--------AA-A
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             37553  5 -     47444 -------AA--------AA-T
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         I 2 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  2840  8 +      6782 G-A----CAA-------AT-A
i Tolypeutes_matacus.TolMat_scaffold_269431             I 4 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  134559  7 -    259118 G-A----CA--------AA-A
i Tonatia_saurophila.TonSau_scaffold_3334               I 1 C 0
s Trachypithecus_auratus.k141_738098                        24445  7 +     38948 G-C----CA--------AA-A
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   18172  7 -     32910 G-C----CA--------AA-A
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       24070  7 +     24652 G-C----CA--------AA-A
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      2948  7 -      3559 G-C----CA--------AA-A
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           40892  7 -     54611 G-C----CA--------AA-A
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       16893  7 +     17312 G-C----CA--------AA-A
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    24256  7 -     25040 G-C----CA--------AA-A
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          2917  7 +      3528 G-C----CA--------AA-A
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  49284  7 +     51589 G-C----CA--------AA-A
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       12460  7 +     14732 G-C----CA--------AA-A
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       2937  7 -     28054 G-C----CA--------AA-A
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44657732  7 -  44834318 G-C----CA--------AA-A
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        2741  7 +      3372 G-C----CA--------AA-A
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   3895  7 +     90398 G-G----CA--------AA-A
i Tragulus_javanicus.TraJav_scaffold_14717              I 1 C 0
s Trichechus_manatus.JH594618.1                          16080847  8 +  31416278 G-A----CAA-------AT-A
i Trichechus_manatus.JH594618.1                         I 4 C 0
s Tupaia_chinensis.KB320831.1                             2790632  5 -   3938065 --------a--------aaaa
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    3156  4 +     13056 --------A--------GA-A
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69312137  5 -  96451834 -------ca--------aa-a
i Tursiops_truncatus.MRVK01000923.1                     I 3 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 25250  3 -     25548 GAT------------------
i Uropsilus_gracilis.UroGra_scaffold_4143_0             I 1 I 2
s Ursus_maritimus.KK498671.1                              6512893  7 +  28682327 g-a----ca--------aa-a
i Ursus_maritimus.KK498671.1                            I 1 I 1
s Varecia_rubra.k141_432109                                  3507  7 -     20643 G-A----CA--------AA-A
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             23049  7 -     33872 G-A----CA--------AA-A
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1523360  7 -   2331223 g-a----ca--------aa-a
i Vicugna_pacos.KN269600.1                              I 1 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                135831  7 -    281493 G-A----CA--------AA-A
i Vulpes_lagopus.VulLag_flattened_line_2045             I 1 C 0
s Xerus_inauris.XerIna_scaffold_7898                       125272  7 -    134049 G-A----AA--------AA-T
i Xerus_inauris.XerIna_scaffold_7898                    I 1 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        212361  7 -    227762 T-A----CA--------AA-A
i Zalophus_californianus.ZalCal_flattened_line_4097     I 1 I 1
s Zapus_hudsonius.ZapHud_scaffold_64392                     13510  7 -     20485 T-G----AA--------AT-A
i Zapus_hudsonius.ZapHud_scaffold_64392                 I 1 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           5632  7 -      8775 G-A----CA--------AA-A
i Ziphius_cavirostris.ZipCav_flattened_line_127025      I 1 C 0
e Sorex_araneus.JH798170.1                               17748817 583 -  27805282 I
e Tadarida_brasiliensis.TadBra_scaffold_145589               4489  0 -      6213 C
e Mesoplodon_bidens.MesBid_scaffold_183284                   2166 255 +      2166 T
e Elephantulus_edwardii.JH947210.1                        7805376  0 +  15467074 C
e Sapajus_macrocephalus.k141_966464                         18775  0 -     62485 C
e Sapajus_apella.ctg10                                   17339400  0 -  30362882 C
e Saimiri_ustus.k141_1282476                                 2644  0 -     76454 C
e Saimiri_sciureus.k141_1947592                              2707  0 +     60816 C
e Saimiri_oerstedii.k141_841116                              2729  0 +     67014 C
e Saimiri_macrodon.k141_2087127                              2634  0 -     60842 C
e Saimiri_cassiquiarensis.k141_808270                        2693  0 +     34089 C
e Saimiri_boliviensis.NW_024100938.1                     15670827  0 -  43202129 C
e Psammomys_obesus.NESX01026517.1                           31739  2 +     77221 I
e Plecturocebus_moloch.k141_890597                          21388  0 -     75465 C
e Plecturocebus_miltoni.k141_841561                         10798  0 +    134592 C
e Plecturocebus_hoffmannsi.k141_1595076                      7838  0 +      8943 C
e Plecturocebus_grovesi.k141_242819                         21078  0 +    152463 C
e Plecturocebus_dubius.k141_3565563                          1725  0 -     55515 C
e Plecturocebus_cupreus.k141_1223294                        21258  0 -     23762 C
e Plecturocebus_cinerascens.k141_744510                     21009  0 +    147771 C
e Plecturocebus_caligatus.k141_2539816                      11404  0 -     98129 C
e Plecturocebus_brunneus.k141_498086                        21163  0 +     67491 C
e Plecturocebus_bernhardi.k141_959214                       20953  0 +     44506 C
e Pithecia_vanzolinii.k141_831006                           11517  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13472609  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          3615  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        10306  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                              7108  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        23157  0 +     78826 C
e Pithecia_albicans.k141_991845                             41728  0 -     61926 C
e Meriones_unguiculatus.MerUng_scaffold_52233               10199  2 +     15977 I
e Macaca_tonkeana.k141_2870633                               2864 158 -     27140 T
e Macaca_nigra.k141_282495                                   2859 158 -     46448 T
e Macaca_maura.k141_251854                                  43912 158 -     79256 T
e Lagothrix_lagothricha.k141_12968                          48243  0 -    147782 C
e Chiropotes_sagulatus.k141_773804                          13416  0 +     40510 C
e Chiropotes_israelita.k141_1189915                         69236  0 +    196370 C
e Cheracebus_torquatus.k141_315545                          44413  0 +     54541 C
e Cheracebus_regulus.k141_2128895                           39738  0 +     57117 C
e Cheracebus_lugens.k141_203936                             20699  0 +     25473 C
e Cheracebus_lucifer.k141_619653                             3676  0 -     18223 C
e Cebus_unicolor.k141_239009                                10656  0 +     25043 C
e Cebus_olivaceus.k141_93739                                 6416  0 -     26817 C
e Cebus_albifrons.Contig22                               18888872  0 -  29618158 C
e Cacajao_melanocephalus.k141_1160263                        5628  0 -    134917 C
e Cacajao_hosomi.k141_303789                                13088  0 -    216513 C
e Cacajao_calvus.k141_96166                                 11040  0 +    125063 C
e Cacajao_ayresi.k141_724503                               112014  0 -    171031 C
e Ateles_paniscus.k141_1631200                               4122  0 -     25888 C
e Ateles_marginatus.k141_899112                             62153  0 +    119057 C
e Ateles_geoffroyi_a.k141_1300742                             14162  0 -     58268 C
e Ateles_chamek.k141_1072810                                 9657  0 +     89302 C
e Ateles_belzebuth.k141_1348307                             58658  0 +     85812 C
e Ateles_geoffroyi_b.tarseq_2582                             9537374  0 +  39197703 C
e Aotus_vociferans.k141_718647                               4130  0 +     23246 C
e Aotus_trivirgatus.k141_1740727                             4124  0 -    104377 C
e Aotus_nancymaae.KZ196176.1                              5747539  0 +   9889416 C
e Aotus_griseimembra.k141_3275623                            3582  0 +     22701 C
e Aotus_azarae.k141_3170768                                 60641  0 +     78111 C
e Alouatta_seniculus.k141_990213                             4923  0 +      6429 C
e Alouatta_puruensis.k141_1284840                            1993  0 -      4927 C
e Alouatta_palliata.k141_1316127                             8190  0 +     10410 C
e Alouatta_nigerrima.k141_2718643                            4904  0 +      7047 C
e Alouatta_macconnelli.k141_1331706                          8248  0 -     10438 C
e Alouatta_juara.k141_298055                                  248  0 +      1823 C
e Alouatta_discolor.k141_811576                              8957  0 -     21359 C
e Alouatta_caraya.k141_5460                                  9393  0 -     11521 C
e Alouatta_belzebul.k141_1818029                             8280  0 -     18050 C

a score=0.000000
s hg38.chr4_GL000008v2_random                                9997 20 +    209709 TT---AG---------GA--A-AC--T-ATG---AAA--------G-GA-A
s Acinonyx_jubatus.LLWD01000356.1                         2032068 19 +   3721120 tc---at---------ca--a-aa--t-atg---aaa--------a-ta--
i Acinonyx_jubatus.LLWD01000356.1                       C 0 I 1
s Acomys_cahirinus.AcoCah_scaffold_1625                    110741 20 -    189883 AT---A---GA------A--A-AT--C-ATG---CAA--------G-GA-A
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10655414 19 +  23371972 tc---at---------ca--a-aa--t-atg---aaa--------a-ga--
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 1 I 2
s Ailurus_fulgens.LNAC01000003.1                          7092339 19 -  16596857 tt---at---------ca--a-at--t-atg---aaa--------a-ga--
i Ailurus_fulgens.LNAC01000003.1                        I 1 I 2
s Allactaga_bullata.AllBul_scaffold_70162                   11053 20 -     22067 TC---A---GA------A--A-AT--G-ATG---AAA--------A-GA-A
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_3103707                  61010 20 +     61638 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        52822 20 +     53391 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         3547 20 +     72529 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          3122 20 +      3797 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             8280  5 -     18050 ----------------------AC--T-AT---------------------
i Alouatta_belzebul.k141_1818029                        C 0 I 3
s Alouatta_caraya.k141_5460                                  9393  5 -     11521 ----------------------AC--T-AT---------------------
i Alouatta_caraya.k141_5460                             C 0 I 3
s Alouatta_discolor.k141_811576                              8957  5 -     21359 ----------------------AC--T-AT---------------------
i Alouatta_discolor.k141_811576                         C 0 I 3
s Alouatta_juara.k141_298055                                  248  5 +      1823 ----------------------AC--T-AT---------------------
i Alouatta_juara.k141_298055                            C 0 I 3
s Alouatta_macconnelli.k141_1331706                          8248  5 -     10438 ----------------------AC--T-AT---------------------
i Alouatta_macconnelli.k141_1331706                     C 0 I 3
s Alouatta_nigerrima.k141_2718643                            4904  5 +      7047 ----------------------AC--T-AT---------------------
i Alouatta_nigerrima.k141_2718643                       C 0 I 3
s Alouatta_palliata.k141_1316127                             8190  5 +     10410 ----------------------AC--T-AT---------------------
i Alouatta_palliata.k141_1316127                        C 0 I 3
s Alouatta_puruensis.k141_1284840                            1993  5 -      4927 ----------------------AC--T-AT---------------------
i Alouatta_puruensis.k141_1284840                       C 0 I 3
s Alouatta_seniculus.k141_990213                             4923  5 +      6429 ----------------------AC--T-AT---------------------
i Alouatta_seniculus.k141_990213                        C 0 I 3
s Ammotragus_lervia.NIVO01013474.1                        3518858 19 +   4113121 tt---at---------ca--a-aa--t-atg---aaa--------a-ga--
i Ammotragus_lervia.NIVO01013474.1                      C 0 I 1
s Anoura_caudifer.AnoCau_scaffold_422                      389003 21 -    631301 TT---AT---------CA--A-AA--T-ATG---AAA--------A-GGAA
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            29439 19 +     33004 GT---AT---------CA--A-AA--T-ATG---AAA--------A-GG--
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 I 1
s Aotus_azarae.k141_3170768                                 60641 13 +     78111 ----------------------AC--T-ATG---AAA--------G-AA-A
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            3582 13 +     22701 ----------------------AC--T-ATG---AAA--------G-AA-A
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5747539 13 +   9889416 ----------------------ac--t-atg---aaa--------g-aa-a
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             4124 13 -    104377 ----------------------AC--T-ATG---AAA--------G-AA-A
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               4130 13 +     23246 ----------------------AC--T-ATG---AAA--------G-AA-A
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     2146 14 +      5067 TT---A-----------GC-A-AA--T-GTG---AA---------------
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      16083 10 +     17483 TC---AG---------CA--A-AA--T------------------------
i Arctocebus_calabarensis.k141_1161114                  C 0 I 5
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 7407 14 -     29036 ----------------------AA--T-ATG---AAA--------A-GAAA
i Artibeus_jamaicensis.ArtJam_scaffold_41619            I 6 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9537374 13 +  39197703 ----------------------AC--T-ATG---AAA--------G-GA-A
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             58658 13 +     85812 ----------------------AC--T-ATG---AAA--------G-GA-A
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 9657 13 +     89302 ----------------------AC--T-ATG---AAA--------G-GA-A
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             14162 13 -     58268 ----------------------AC--T-ATG---AAA--------G-GA-A
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             62153 13 +    119057 ----------------------AC--T-ATG---AAA--------G-GA-A
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               4122 13 -     25888 ----------------------AC--T-ATG---AAA--------G-GA-A
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 4887 20 -     16375 TT---AG---------CA--A-AA--T-ATG---AAA--------A-GA-A
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              1206 20 +      2719 TT---AG---------GA--A-AA--T-ATG---AAA--------A-GA-A
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26378859 19 +  51448160 tt---at---------ca--a-aa--t-atg---aaa--------a-ga--
i Balaenoptera_acutorostrata.KI537095.1                 C 0 I 1
s Balaenoptera_bonaerensis.DF502048.1                        4091 19 -     13118 tt---at---------ca--a-aa--t-atg---aaa--------a-ga--
i Balaenoptera_bonaerensis.DF502048.1                   C 0 I 1
s Beatragus_hunteri.BeaHun_scaffold_21644                   41920 19 -     72089 TT---AT---------CA--A-AA--T-ATG---AAA--------A-GA--
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 I 1
s Bison_bison.KN264915.1                                  6557951 19 +   6870073 tt---at---------ca--a-aa--t-atg---aaa--------a-ga--
i Bison_bison.KN264915.1                                C 0 I 1
s Bos_indicus.CM003021.1                                138138190 19 - 161108492 tt---at---------ca--a-aa--t-atg---aaa--------a-ga--
i Bos_indicus.CM003021.1                                C 0 I 1
s Bos_mutus.JH883513.1                                     570564 19 -    998990 tt---at---------ca--a-aa--t-atg---aaa--------a-ga--
i Bos_mutus.JH883513.1                                  C 0 I 1
s Bos_taurus.CM000177.6                                 136293923 19 - 158972876 tt---at---------ca--a-aa--t-atg---aaa--------a-ga--
i Bos_taurus.CM000177.6                                 C 0 I 1
s Bubalus_bubalis.KI419065.1                              1229678 19 -   1914593 tt---at---------ca--a-aa--t-atg---aaa--------a-ga--
i Bubalus_bubalis.KI419065.1                            C 0 I 1
s Cacajao_ayresi.k141_724503                               112014 13 -    171031 ----------------------AC--T-ATG---AAA--------G-GA-A
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 11040 13 +    125063 ----------------------AC--T-ATG---AAA--------G-GA-A
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                13088 13 -    216513 ----------------------AC--T-ATG---AAA--------G-GA-A
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        5628 13 -    134917 ----------------------AC--T-ATG---AAA--------G-GA-A
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3218258 19 -   8989139 tt---at---------ca--a-aa--t-atg---aaa--------a-ga--
i Camelus_bactrianus.KN276303.1                         C 0 I 1
s Camelus_dromedarius.KN271192.1                           395963 19 -  15254737 tt---at---------ca--a-aa--t-atg---aaa--------a-ga--
i Camelus_dromedarius.KN271192.1                        C 0 I 1
s Camelus_ferus.KB016973.1                                2971696 19 +   6889770 tt---at---------ca--a-aa--t-atg---aaa--------a-ga--
i Camelus_ferus.KB016973.1                              C 0 I 1
s CanFam4.chr31                                          11516792 19 +  39901454 TC---AT---------CA--A-AA--T-ATG---AAA--------A-GA--
i CanFam4.chr31                                         C 0 I 2
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   11810 19 +     87036 TC---AT---------CA--A-AA--T-ATG---AAA--------A-GA--
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 I 2
s Canis_lupus_dingo.QKWQ01001993.1                       11263453 19 -  35597290 tc---at---------ca--a-aa--t-atg---aaa--------a-ga--
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 I 2
s Canis_lupus_familiaris.chr31                           11085982 19 +  39895921 tc---at---------ca--a-aa--t-atg---aaa--------a-ga--
i Canis_lupus_familiaris.chr31                          C 0 I 2
s Canis_lupus_orion.HG994411.1                           16453006 19 -  44759192 tc---at---------ca--a-aa--t-atg---aaa--------a-ga--
i Canis_lupus_orion.HG994411.1                          C 0 I 2
s Capra_aegagrus.CM003214.1                              21323934 19 + 157394656 tt---aa---------ca--a-aa--t-atg---aaa--------a-ga--
i Capra_aegagrus.CM003214.1                             C 0 I 1
s Capra_hircus.CM004562.1                               135705161 19 - 157403528 tt---aa---------ca--a-aa--t-atg---aaa--------a-ga--
i Capra_hircus.CM004562.1                               C 0 I 1
s Capromys_pilorides.CapPil_scaffold_979108                   246 14 -      1248 --------------------A-AG--C-ATG---CAA--------A-AA-A
i Capromys_pilorides.CapPil_scaffold_979108             I 3 C 0
s Carlito_syrichta.NW_007248099.1                          307245 20 +    345090 TT---ag---------ca--a-aa--t-gtg---aaa--------a-ga-a
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               58197 21 +     67245 TT---AT---------CA--A-AA--T-ATG---AAA--------A-GAAA
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   28688 20 +     33760 TT---G--------GC-A--A-AT--T-ATG---AAA--------A-GA-A
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   157465 19 -    276539 TT---GC---------CA--A-AG--T-ATG---AAA--------A-AG--
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 I 1
s Cavia_aperea.AVPZ01000278.1                            15784846 20 -  24422027 TT---A-----------GCCA-AA--T-ATC---TAA--------A-Gg-a
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15796780 20 -  24440124 tt---a-----------GCCA-AA--T-ATC---TAA--------A-Gg-a
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       174971 20 +    436027 TT---A-----------GCCA-AA--T-ATC---TAA--------A-GG-A
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18888872 13 -  29618158 ----------------------AC--T-ACA---AAA--------G-GA-A
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 6416 13 -     26817 ----------------------AC--T-ACA---AAA--------G-GA-A
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                10656 13 +     25043 ----------------------AC--T-ACA---AAA--------G-GA-A
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         6278 20 +     21754 TT---AG---------CA--A-AA--T-GTG---AAA--------A-GA-A
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4362575 19 +   7569818 TT---Ac---------ca--a-aa--t-atg---aaa--------g-ga--
i Ceratotherium_simum.JH767818.1                        C 0 I 2
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         2327 19 -      9338 TT---AT---------CA--A-AA--T-ATG---AAA--------G-GA--
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 I 2
s Cercocebus_atys.KQ010443.1                              6552806 20 +   6739814 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      54283 20 -     54931 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         19267 20 -     19697 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         56798 20 -    107033 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        3238 20 -      3853 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          27169 20 +     30494 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           3198 20 -      4022 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          3087 20 -      3505 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           21875 20 +     35983 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11988412 20 +  12117833 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46475165 20 +  46592721 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      32994 20 +     33420 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        3028 20 -      3443 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      4026 20 -      4669 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        3814 20 -      4411 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         3349 20 -      4205 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_2711798           362 18 -       616 TT---TG---------CA--A-AA--C-A-----AAA--------A-AA-A
i Chaetophractus_vellerosus.ChaVel_scaffold_2711798     C 0 C 0
s Cheirogaleus_major.k141_1157592                           57191 20 -     68416 TT---AG---------CA--A-AA--T-ATG---AAA--------A-GA-A
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            6233 20 +     13308 TT---AA---------CA--A-AA--T-ATG---AAA--------A-GA-A
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             3676 13 -     18223 ----------------------AC--T-ATG---AAA--------G-GA-A
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             20699 13 +     25473 ----------------------AC--T-ATG---AAA--------G-GA-A
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           39738 13 +     57117 ----------------------AC--T-ATG---AAA--------G-GA-A
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          44413 13 +     54541 ----------------------AC--T-ATG---AAA--------G-GA-A
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15960011 13 +  43084221 tt---a-----------gcca-aa--t-atc--------------------
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         69236 13 +    196370 ----------------------AC--T-ATG---AAA--------G-GA-A
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          13416 13 +     40510 ----------------------AC--T-ATG---AAA--------G-GA-A
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15136633 20 -  15256731 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      31679 20 -     53260 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101142128 20 + 101219884 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                15152 20 -     21363 CT---TG---------CA--A-AA--C-AGG---CAA--------A-GA-A
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           760463 20 +    964067 CT---TG---------CA--A-AA--C-AGg---caa--------a-ga-a
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_141308              8811  9 -     12508 tt---aa---------ca--a-ac---------------------------
i Chrysochloris_asiatica.ChrAsi_scaffold_141308         C 0 T 2035
s Colobus_angolensis.KN985967.1                          10880707  7 +  10971483 TT---AG---------CA--A------------------------------
i Colobus_angolensis.KN985967.1                         C 0 I 2
s Colobus_guereza.LG08                                  147661864  7 + 156195979 TT---AG---------CA--A------------------------------
i Colobus_guereza.LG08                                  C 0 I 2
s Colobus_polykomos.k141_1406057                            13852  7 +     23629 TT---AG---------CA--A------------------------------
i Colobus_polykomos.k141_1406057                        C 0 I 2
s Condylura_cristata.JH655880.1                          60611319 16 +  78930452 Ta---t----------ca--a-aa--t-atg---gaa--------a-----
i Condylura_cristata.JH655880.1                         C 0 I 9
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         38309 21 -     40477 TT---AT---------GA--A-AA--T-ACG---AAA--------A-TAAA
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 276638 20 -    399297 TT---A--------GC-A--A-GT--C-ATG---CAA--------A-GA-A
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53027264 17 +  72327488 TT---A--------GG-A--A-AT--C-ATG---CAA--------G-----
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             18392 15 -     19186 TC---A----------CA--T-TT--T-TTA---AAA--------------
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 I 2
s Cryptoprocta_ferox.CryFer_flattened_line_19014            50083 19 -     70449 TC---AT---------CA--A-AA--T-ATG---AAA--------A-GA--
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 I 1
s Ctenodactylus_gundi.CteGun_scaffold_447                  206417 18 -    956709 ----------------------------ATG---AAAGTAAAATAT-GA-A
i Ctenodactylus_gundi.CteGun_scaffold_447               I 21 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 28960 21 -     67205 TT---A-----------GCAAAAG--T-ATC---CAA--------A-CA-A
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                16006 19 +     26546 TT---A-----------GCAA-AA--T-AGC---AAA--------A--G-A
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             57107 20 -    236241 CT---A-----------GCCA-AA--T-ATC---CAA--------A-GG-A
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          180904 20 -   6883506 GT---tg---------ca--a-aa--c-ata---aaa--------a-ga-a
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16843048 20 +  31942871 TT---AG---------CA--A-TA--T-ATG---AAA--------A-TA-A
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80035540 19 -  96802777 tt---at---------ca--a-aa--t-atg---aaa--------a-ga--
i Delphinapterus_leucas.KZ290064.1                      C 0 I 1
s Desmodus_rotundus.KZ672188.1                           18697507 21 -  18957592 tt---at---------ca--a-aa--t-atg---aaa--------a-gaaa
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 321222 19 +    993696 TT---AT---------ca--a-aa--t-atg---aaa--------g-ga--
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 I 2
s Diceros_bicornis.DicBicMic_scaffold_9545                   1874 19 +    151128 TT---AT---------CA--A-AA--T-ATG---AAA--------G-GA--
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 I 2
s Dinomys_branickii.DinBra_scaffold_1996                   155895 20 +    228994 TC---A-----------GCAA-AA--T-ATC---CAA--------A-GA-A
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3653608 20 +   4240102 tT---A--------GC-A--A-AA--T-ATG---AAT--------G-GG-A
i Dipodomys_ordii.KN672545.1                            I 1 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 25172 20 +     28912 TT---A--------GC-A--A-AA--T-ATG---AAT--------G-GG-A
i Dipodomys_stephensi.DipSte_scaffold_44365             I 1 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                34358 20 -     73477 TC---A-----------GTCA-AA--C-ATC---TGA--------A-GG-A
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22993565 20 -  44670279 TT---AT---------ca--a-gg--t-tta---aaa--------a-ga-a
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 10886 21 +     24177 tt---at---------ca--a-aa--t-atg---aaa--------a-gaaa
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1490207 19 +   1727528 tt---at---------ca--a-aa--t-atg---aaa--------a-ga--
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 I 1
s Elephantulus_edwardii.JH947210.1                        7805376  3 +  15467074 -----------------------------------------------GG-A
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        237919 17 -    369425 AT---A--------GC-A--A-AT--T-ATG---CAA--------A-----
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           4935 17 -      7838 AT---A--------GC-A--A-AT--T-ATG---CAA--------A-----
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85869867 19 +  99434291 tc---ac---------ca--a-aa--t-atg---aaa--------a-ga--
i Enhydra_lutris.KZ291749.1                             I 1 I 2
s Eptesicus_fuscus.JH977687.1                             4702460 21 +   6522550 tt---ac---------ta--a-aa--t-att---aaa--------a-gaaa
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5851651 16 -   7175178 ------t---------ca--a-aa--t-atg---aaa--------a-ga--
i Equus_asinus.JREZ01000062.1                           C 0 I 2
s Equus_caballus.CM000402.2                              13350154 16 +  41866177 ------t---------ca--a-aa--t-atg---aaa--------a-ga--
i Equus_caballus.CM000402.2                             C 0 I 2
s Equus_przewalskii.ATBW01073585.1                          11644 16 +     92910 ------t---------ca--a-aa--t-atg---aaa--------a-ga--
i Equus_przewalskii.ATBW01073585.1                      C 0 I 2
s Erinaceus_europaeus.JH835290.1                         11531200 14 +  16010500 ct---a----------ca--a-aa--a---g---aaa--------a-----
i Erinaceus_europaeus.JH835290.1                        C 0 I 1
s Erythrocebus_patas.Contig8                             48768811 20 -  48907691 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          313746 17 +    330699 TT---A-----------A--A-AA--T-ATG---AAA--------A-GA--
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 I 1
s Eubalaena_japonica.EubJap_flattened_line_7756             60198 19 +     89355 TT---AT---------CA--A-AA--T-ATG---AAA--------A-GA--
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 I 1
s Eulemur_albifrons.k141_715837                              3238 20 +     13586 TT---AG---------CA--A-AA--T-ATG---AAA--------A-GA-A
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               3173 20 -      6809 TT---AG---------CA--A-AA--T-ATG---AAA--------A-GA-A
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             9648 20 +     36558 TT---AG---------CA--A-AA--T-ATG---AAA--------A-GA-A
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             5964 20 +     60246 TT---AC---------CA--A-AA--T-ATG---AAA--------A-GA-A
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 9446 20 +    109717 TT---AG---------CA--A-AA--T-ATG---AAA--------A-GA-A
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               13826 20 +     16540 TT---AC---------CA--A-AA--T-ATG---AAA--------A-GA-A
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                14101 20 +     27497 TT---AG---------CA--A-AA--T-ATG---AAA--------A-GA-A
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           16562 20 +     26808 TT---AG---------CA--A-AA--T-ATG---AAA--------A-GA-A
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                31291 20 +     46535 TT---AG---------CA--A-AA--T-ATG---AAA--------A-GA-A
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              14014 20 -     29447 TT---AG---------CA--A-AA--T-ATG---AAA--------A-GA-A
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129891044 19 - 159252932 tc---at---------ca--a-aa--t-atg---aaa--------a-ta--
i Felis_catus.CM001386.2                                C 0 I 1
s Felis_catus_fca126.CM031420.1                         129278116 19 - 158578461 tc---at---------ca--a-aa--t-atg---aaa--------a-ta--
i Felis_catus_fca126.CM031420.1                         C 0 I 1
s Felis_nigripes.FelNig_flattened_line_8080                 19251 19 +     52776 TC---AT---------CA--A-AA--T-ATG---AAA--------A-TA--
i Felis_nigripes.FelNig_flattened_line_8080             C 0 I 1
s Fukomys_damarensis.KN123630.1                          13890953 20 -  19261668 TT---A-----------GCAA-AA--C-ATC---AAA--------A-Ga-c
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     209146 20 -    847004 TC---AA---------CA--A-AA--T-ATG---GAA--------A-GA-A
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           11525 20 -     43889 TC---AA---------CA--A-AA--T-ATG---GAA--------A-GA-A
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           8593 20 +     27357 TC---AA---------CA--A-AA--T-ATG---GAA--------A-GA-A
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               154505 20 +    324696 TT---CG---------CA--A-AA--T-ATG---AAA--------A-GA-A
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    180007 19 -    189561 tt---at---------ca--a-aa--t-atg---aaa--------a-ga--
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 I 1
s Glis_glis.GliGli_scaffold_79770                           10906 21 -     18683 TTAACA-----------A--A-AA--T-GTG---AAA--------A-GA-A
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               3395 20 -     14630 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119650494 20 - 195582420 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   75646 18 +    118900 TT---A-----------A--A-AC--T-GTG---AAA--------A-GA-A
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                         3798 20 +      3980 TT---AG---------CA--A-AA--T-ATG---AAA--------A-GA-A
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             26274 20 +     26611 TT---AG---------CA--A-AA--T-ATG---AAA--------A-GA-A
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             3734 20 +     56096 TT---AG---------CA--A-AA--T-ATG---AAA--------A-GA-A
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        27011 20 -     42470 TT---AG---------CA--A-AA--T-ATG---AAA--------A-GA-A
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        43605 20 -     54384 TT---AG---------CA--A-AA--T-ATG---AAA--------A-GA-A
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              15291 19 +     53719 TC---AT---------CA--A-AA--T-ATG---AAA--------A-GA--
i Helogale_parvula.HelPar_flattened_line_22962          C 0 I 1
s Hemitragus_hylocrius.HemHyl_scaffold_16669                26206 19 -     91191 TT---AT---------CA--A-AA--T-ATG---AAA--------A-GA--
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 I 1
s Heterocephalus_glaber.JH602058.1                        2549342 19 +  31725842 tt---a-----------gtaa-aa--t-atc---aa---------a-ga-a
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               55759 18 +     73687 TT---AC---------CA--A-AC--C-ATA---AAA--------A-G---
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              145775 19 +    277961 TT---AT---------CA--A-AA--T-ATG---AAA--------A-GA--
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 I 1
s Hipposideros_armiger.JXIK01001085.1                      277091 21 -    477199 tt---at---------ca--a-aa--t-atg---aaa--------a-gaaa
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              6250 21 -      9143 TT---AT---------CA--A-AA--T-ATG---AAA--------A-GAAA
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      2642 20 -   7690867 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Hoolock_leuconedys.ctg79                                 C 0 I 11
s Hyaena_hyaena.HyaHya_flattened_line_20729                 14386 19 -     67322 TC---AT---------CA--A-AA--T-ATG---AAA--------A-GA--
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 I 1
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           17267 20 -    119109 TT---A-----------GCTA-AA--T-ATC---CAA--------A-GG-A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              3207 20 +      5897 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_1485652                              1627 20 -      1697 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Hylobates_agilis.k141_1485652                         C 0 C 0
s Hylobates_klossii.k141_466549                              9651 20 +     11537 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14622752 20 -  25970782 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                               8 20 -      2977 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             32139 20 -     60944 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     4393 20 +     22540 GT---A-----------TCAA-AA--T-ATG---AAA--------A-GA-A
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7124272 14 +  13083262 tg---a-----------a-ca-aa--t-gTG---AA---------------
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_1884019                                   1479 20 -      2196 TT---AG---------CA--A-AA--T-ATG---AAA--------A-GA-A
i Indri_indri.k141_1884019                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               7528 19 +     17520 TT---AT---------CA--A-AA--T-ATG---AAA--------A-GA--
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 I 1
s Jaculus_jaculus.JH725517.1                              8563806 20 +  11848649 tc---a--------ga-a--a-at--t-atg---aaa--------a-ga-a
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               22358 19 +     37189 TT---AT---------CA--A-AA--T-ATG---AAA--------A-GA--
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 I 1
s Lagothrix_lagothricha.k141_12968                          48243 13 -    147782 ----------------------AC--T-ATG---AAA--------A-GA-A
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   112256 21 -    115756 TT---AT---------TA--A-AA--T-ATG---AAA--------A-GAAA
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258405294 20 - 285822530 TT---AG---------CA--A-AA--T-ATG---AAA--------A-GA-A
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        22163 20 +     39228 TT---AG---------CA--A-AA--T-ATG---AAA--------A-GA-A
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            51538 20 +     63517 TT---AG---------CA--A-AA--T-ATG---AAA--------A-GA-A
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        76782 20 +    116806 TT---AG---------CA--A-AA--T-ATG---AAA--------A-GA-A
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     29802 20 -     33031 TT---AG---------CA--A-AA--T-ATG---AAA--------A-GA-A
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3084084 19 -   3498232 tc---at---------ca--a-aa--t-atg---aa---------aaga--
i Leptonychotes_weddellii.KB714749.1                    I 1 I 2
s Lepus_americanus.LepAme_scaffold_62849                    11261 22 +     22452 -T---A-----------G--C-AAAAC-AACAACAAC--------A-AA-A
i Lepus_americanus.LepAme_scaffold_62849                C 0 I 2
s Lipotes_vexillifer.KE558548.1                            134693 19 +   3060487 tt---at---------ca--a-aa--t-atg---aaa--------a-ga--
i Lipotes_vexillifer.KE558548.1                         C 0 I 1
s Lophocebus_aterrimus.ctg55                             19245894 20 +  19376315 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            8891 10 +     84689 TT---AG---------CA--A-AA--T------------------------
i Loris_lydekkerianus.k141_550999                       C 0 I 7
s Loris_tardigradus.ctg97                                 3776642 10 +   6799190 TT---AG---------CA--A-AA--T------------------------
i Loris_tardigradus.ctg97                               C 0 I 7
s Loxodonta_africana.GL010040.1                          20590405 20 -  62548349 TT---AT---------CA--A-AC--C-ATG---AAA--------A-TC-A
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11085438 19 +  39895028 tc---at---------ca--a-aa--t-atg---aaa--------a-ga--
i Lycaon_pictus.CM007556.1                              C 0 I 2
s Macaca_arctoides.k141_2201161                             17570 20 +     74745 TT---AG---------CA--A-AC--T-ATG---AAA--------G-TT-A
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12704080 20 +  12821369 TT---AG---------CA--A-AC--T-ATG---AAA--------G-TT-A
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               6176 20 +      6569 TT---AG---------CA--A-AC--T-ATG---AAA--------G-TT-A
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           44478 20 +     63263 TT---AG---------CA--A-AC--T-ATG---AAA--------G-TT-A
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_925451                                  486 20 +     10231 TT---AG---------CA--A-AC--T-ATG---AAA--------G-TT-A
i Macaca_fuscata.k119_925451                            C 0 C 0
s Macaca_leonina.k141_3421209                                2627 20 +      3017 TT---AG---------CA--A-AC--T-ATG---AAA--------G-TT-A
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_mulatta.NC_041755.1                            196033157 20 + 196197964 TT---AG---------CA--A-AC--T-ATG---AAA--------G-TT-A
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11443263 20 +  11645122 TT---AG---------CA--A-AC--T-ATG---AAA--------G-TT-A
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_radiata.k141_1580474                                3019 20 -      3617 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 13349 20 -     55006 TT---AG---------CA--A-AC--T-ATG---AAA--------G-TT-A
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43838386 20 +  43892939 TT---AG---------CA--A-AC--T-ATG---AAA--------G-TT-A
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                5608 20 -      5978 TT---AG---------CA--A-AC--T-ATG---AAA--------G-TT-A
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                700301 21 +    802869 TT---AT---------CA--A-AA--T-ATG---AAA--------A-GAAA
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43435056 20 -  43563597 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4447882 20 -   4543643 TT---AG---------CA--A-AC--T-AGG---AAA--------G-GA-A
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            144795 19 +    252755 tt---at---------ca--a-aa--t-agc---aaa--------a-ga--
i Manis_javanica.JSZB01003966.1                         C 0 I 1
s Manis_pentadactyla.KN017078.1                             34870 19 +     58827 tt---at---------ca--a-aa--t-agg---aaa--------a-ga--
i Manis_pentadactyla.KN017078.1                         C 0 I 1
s Marmota_marmota.CZRN01000005.1                         36872107 14 +  64221397 TG---A-----------AC-A-AA--T-GTG---AA---------------
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       62956 21 -    234502 TT---AT---------CA--A-AA--T-ATG---AAC--------A-GAAA
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_146202             677 19 -      1999 TC---AC---------CA--A-AA--T-ATG---AAA--------A-GA--
i Mellivora_capensis.MelCap_flattened_line_146202       I 1 I 2
s Meriones_unguiculatus.MerUng_scaffold_52233               10201 15 +     15977 -----------------A--A-AT--A-ATA---CAA--------A-GG-A
i Meriones_unguiculatus.MerUng_scaffold_52233           I 2 C 0
s Mesocricetus_auratus.KB708139.1                         1045003 17 -  26018355 TT---A--------GC-A--A-AT--C-ATG---CAA--------A-----
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Microcebus_murinus.CM007691.1                          16508408 20 +  47401472 Tt---ag---------ca--a-aa--t-atg---aaa--------a-ga-a
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  29991 20 -     48017 TT---AT---------CA--A-GG--T-TTA---ATT--------A-GA-A
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               21382 21 -     32043 TT---AT---------CA--A-AA--T-ATG---AAA--------A-GAAA
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22818122 17 -  98408828 AT---A--------GC-A--A-CT--T-ATG---CAA--------A-----
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8208130 21 +  10048721 tt---at---------ca--a-aa--t-acg---AAG--------A-GAAA
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            32802 21 +     45743 TT---AT---------CA--A-AA--T-GTG---AAG--------A-GAAA
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        33711 20 +     34273 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         9592 19 -    104932 TC---AT---------CA--A-AA--T-AGG---AA---------AAGA--
i Mirounga_angustirostris.MirAng_flattened_line_8852    I 203 I 2
s Mirza_zaza.k141_226143                                     3806 20 +      8497 TT---AG---------CA--A-AA--T-ATG---AAA--------A-GA-A
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 145128 19 +    154973 TT---AT---------CA--A-AA--T-ATG---AAA--------A-GA--
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 I 1
s Mormoops_blainvillei.MorMeg_scaffold_2952                159888 21 +    265003 TT---AT---------CA--A-AA--T-ATG---AAA--------A-GAAA
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 3309 19 -      4346 TT---AT---------CA--A-AA--T-ATG---AAA--------A-GA--
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 I 1
s Mungos_mungo.MunMun_flattened_line_8729                  142982 19 -    168139 TC---AT---------CA--A-AA--T-ATG---AAA--------A-GA--
i Mungos_mungo.MunMun_flattened_line_8729               C 0 I 1
s Murina_feae.MurFea_scaffold_2254                          17767 21 -    100666 TT---AT---------TA--A-AA--T-ATT---AAA--------A-GAAA
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70764602 22 +  92629107 -T---A----AT-AGC-A--A-AT--C-GTG---CAA--------A-GA-A
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75487644 20 +  98207768 AT---A--------GC-A--A-AT--C-ATG---AAA--------A-GA-A
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67553832 23 +  89017189 AT---A--GCA---GC-A--A-AT--A-ATG---CAA--------A-GA-A
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74328825 20 +  97876770 AT---A--------Gc-a--a-at--c-atg---aaa--------a-ga-a
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              9388 17 +     98495 -T---A-----------A--A-AA--T-GTG---AAA--------A-GA-A
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4422249 19 -  28371801 tc---ac---------ca--a-aa--t-atg---gaa--------a-ga--
i Mustela_putorius.JH417978.1                           I 1 I 2
s Myocastor_coypus.MyoCoy_scaffold_3653                     88311 18 -    117718 TT---A-----------ACAA-AG--C-ATA---CAA--------A-A---
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               966092 21 +   8389877 tt---at---------ta--a-aa--t-atg---aaa--------a-gaaa
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5017781 21 +   6462685 tt---at---------ta--a-aa--t-atg---aaa--------a-gaaa
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3463678 21 -   3747815 tt---at---------ta--a-aa--t-atg---aaa--------a-gaaa
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         8872 21 +     66751 TT---AT---------TA--A-AA--T-ATG---AAA--------A-GAAA
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3752 20 -      8794 TT---TG---------CA--A-AA--C-CTA---CAA--------A-GA-A
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            108731  6 +    362372 TT---a--------gt-a---------------------------------
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               6086 20 +     48152 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4482984 19 -  14209539 tc---at---------ca--a-aa--t-atg---aa---------aaga--
i Neomonachus_schauinslandi.NINY01007774.1              I 1 I 2
s Neophocaena_asiaeorientalis.KZ688543.1                  3949741 19 -   4490290 tt---at---------ca--a-aa--t-atg---aaa--------a-ga--
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 I 1
s Noctilio_leporinus.NocLep_scaffold_12062                  47995 21 +     94413 TT---AT---------TA--A-AA--T-AGG---AAA--------A-GAAA
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_302224                              56 20 +      1516 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Nomascus_annamensis.k141_302224                       C 0 C 0
s Nomascus_concolor.k141_49591                               1177 20 +      2014 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Nomascus_concolor.k141_49591                          C 0 C 0
s Nomascus_gabriellae.k141_642452                             102 20 +      2851 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             22981 20 -  18771707 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                   730 20 +      4512 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                28431 19 +   3668941 tc---at---------ca--a-aa--t-atg---aaa--------a-ga--
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 I 2
s Nycticebus_bengalensis.LG16                            65565530  7 -  95554990 TT---AG---------CC--A------------------------------
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            2258  7 +      6470 TT---AG---------CC--A------------------------------
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65667878  7 +  89412551 TT---AG---------CA--A------------------------------
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4994242 18 -  23139505 TT---A-----------G--C-AA--C-ATG---AAT--------A-CA-G
i Ochotona_princeps.JH802095.1                          C 0 I 2
s Octodon_degus.JH651621.1                                3683803 20 +  10294119 tt---a-----------GCAA-AG--C-ATC---CAA--------A-CA-A
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             677634 15 -   3126709 tc---at---------ca--a-aa--t-atg---aa---------------
i Odobenus_rosmarus.KB229369.1                          I 1 I 1
s Odocoileus_virginianus.KZ101650.1                       1078437 19 +   1425656 tt---at---------ca--a-aa--t-atg---aaa--------a-ga--
i Odocoileus_virginianus.KZ101650.1                     C 0 I 1
s Okapia_johnstoni.LVCL01S0017931.1                         35732 19 +     78940 tt---at---------ca--a-aa--t-atg---aaa--------a-ga--
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 I 1
s Ondatra_zibethicus.OndZib_scaffold_6821                  123390 17 +    145789 AT---A--------GC-A--A-AT--T-ATG---CAG--------A-----
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  35151 20 +     62360 TT---A--------GC-A--A-AC--T-GTG---CAA--------A-AA-A
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7223425 19 -   7562323 tt---at---------ca--a-aa--t-atg---aaa--------a-ga--
i Orcinus_orca.KB316965.1                               C 0 I 1
s Orycteropus_afer.OryAfe_flattened_line_13509              42343 20 -     66828 TT---AC---------CA--A-GC--C-ATG---AAA--------A-GA-A
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141873925 20 + 163896628 tt---a-----------g--c-aaaac-aac---aaa--------a-aa-a
i Oryctolagus_cuniculus.CM000803.1                      C 0 I 2
s Otocyon_megalotis.JAEUCK010005121.1                      305769 19 -    505867 tc---at---------ca--a-aa--t-atg---aaa--------a-ga--
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 I 2
s Otolemur_crassicaudatus.k141_321880                       37236 20 +     38679 TC---AA---------CA--A-TA--T-ATG---GAA--------A-GA-A
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18006678 20 -  38779656 tc---aa---------ca--a-aa--t-atg---gaa--------a-aa-a
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134075999 19 - 275406953 tt---at---------ca--a-aa--t-atg---aaa--------a-ga--
i Ovis_aries.CM001582.2                                 C 0 I 1
s Ovis_canadensis.OviCan_scaffold_6251                      77213 19 +    140051 TT---AT---------CA--A-AA--T-ATG---AAA--------A-GA--
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 I 1
s Pan_paniscus.CM003386.1                               127572739 20 - 205426864 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120149892 20 - 196562556 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  32446 19 +    295523 TC---AT---------CA--A-AA--T-ATG---AAA--------A-TA--
i Panthera_onca.PanOnc_flattened_line_1615              C 0 I 1
s Panthera_pardus.KV860323.1                              3636180 19 +  18214204 tc---at---------ca--a-aa--t-atg---aaa--------a-ta--
i Panthera_pardus.KV860323.1                            C 0 I 1
s Panthera_tigris.KE721879.1                              5025827 19 -   6340057 tc---at---------ca--a-aa--t-atg---aaa--------a-ta--
i Panthera_tigris.KE721879.1                            C 0 I 1
s Pantholops_hodgsonii.KE114631.1                         1064860 19 -   1292953 tt---at---------ca--a-aa--t-atg---aaa--------a-ga--
i Pantholops_hodgsonii.KE114631.1                       C 0 I 1
s Papio_anubis.CM001492.2                               188153838 20 - 188283584 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            50050 20 +     76494 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47511235 20 +  47705337 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 65212 20 -    104429 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  15003 20 -     29451 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                35406 20 +     35859 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113742 19 -    135482 TC---AT---------CA--A-AA--T-GTG---AAA--------A-GA--
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 I 1
s Perodicticus_ibeanus.k141_117958                           3284 10 -     23713 TT---AG---------CA--A-AA--T------------------------
i Perodicticus_ibeanus.k141_117958                      C 0 I 5
s Perodicticus_potto.k141_713187                            22582 10 -     27972 TT---AG---------CA--A-AA--T------------------------
i Perodicticus_potto.k141_713187                        C 0 I 5
s Perognathus_longimembris.PerPac_flattened_line_22291      41181 27 -     45160 TT---A-TTTATTTTC-A--A-AC--TAATG---TAT--------A-GA--
i Perognathus_longimembris.PerPac_flattened_line_22291  I 1 C 0
s Peromyscus_maniculatus.KI615518.1                       4948332 19 -   8017169 -T---A--------GC-A--A-AT--C-ATG---CAA--------A-AA-A
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    10497 20 -     36578 TT---A-----------TCAA-CA--T-CTC---AAA--------A-GA-A
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            120042 19 -    122454 TT---AT---------CA--A-AA--T-ATG---AAA--------A-GA--
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 I 1
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            95542 14 +    112873 ----------------------AA--T-ATG---AAA--------A-GAAA
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        I 7 C 0
s Pithecia_albicans.k141_991845                             41728 13 -     61926 ----------------------AC--T-ATG---AAA--------A-GA-A
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        23157 13 +     78826 ----------------------AC--T-ATG---AAA--------A-GA-A
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              7108 13 -     15800 ----------------------AC--T-ATG---AAA--------A-GA-A
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        10306 13 -     16101 ----------------------AC--T-ATG---AAA--------A-GA-A
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          3615 13 +      9673 ----------------------AC--T-ATG---AAA--------A-GA-A
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13472609 13 -  19735023 ----------------------AC--T-ATG---AAA--------A-GA-A
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           11517 13 -     31692 ----------------------AC--T-ATG---AAA--------A-GA-A
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Piliocolobus_badius.k141_1497351                           3092  7 -      3310 TT---CG---------CA--A------------------------------
i Piliocolobus_badius.k141_1497351                      C 0 I 2
s Piliocolobus_gordonorum.k141_902470                       22997  7 -     82327 TT---CG---------CA--A------------------------------
i Piliocolobus_gordonorum.k141_902470                   C 0 I 2
s Piliocolobus_kirkii.k141_557609                           19744  7 +     19957 TT---CG---------CA--A------------------------------
i Piliocolobus_kirkii.k141_557609                       C 0 I 2
s Piliocolobus_tephrosceles.PDMG02000036.1               26737758  7 +  26888534 TT---CG---------CA--A------------------------------
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 I 2
s Platanista_gangetica.PlaMin_flattened_line_72990           4108 19 +     21690 TT---AT---------CA--A-AA--T-ATG---AAA--------A-GA--
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 I 1
s Plecturocebus_bernhardi.k141_959214                       20953 13 +     44506 ----------------------AC--T-ATG---AAA--------G-GA-A
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        21163 13 +     67491 ----------------------AC--T-ATG---AAA--------G-GA-A
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      11404 13 -     98129 ----------------------AC--T-ATG---AAA--------G-GA-A
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     21009 13 +    147771 ----------------------AC--T-ATG---AAA--------G-GA-A
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        21258 13 -     23762 ----------------------AC--T-ATG---AAA--------G-GA-A
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          1725 13 -     55515 ----------------------AC--T-ATG---AAA--------G-GA-A
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         21078 13 +    152463 ----------------------AC--T-ATG---AAA--------G-GA-A
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      7838 13 +      8943 ----------------------AC--T-ATG---AAA--------G-GA-A
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                         10798 13 +    134592 ----------------------AC--T-ATG---AAA--------G-GA-A
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          21388 13 -     75465 ----------------------AC--T-ATG---AAA--------G-GA-A
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              185283 20 -    373494 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19805191 20 +  19899266 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               3330 20 -     15069 TT---AG---------CA--A-AC--T-ATA---AAA--------G-GA-A
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              3464 20 +     14865 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                75630 18 +     78963 TT---AC---------CA--A-AC--C-ATA---AAA--------A-G---
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6846670 20 +  12164890 Tt---ag---------ca--a-aa--t-atg---aaa--------a-ga-a
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    665983 20 -   2312742 tt---ag---------ca--a-aa--t-atg---aaa--------a-ga-a
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         1813 20 +     11805 TT---AG---------CA--A-AA--T-ATG---AAA--------A-GA-A
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           41148 20 +     52369 TT---AG---------CA--A-AA--T-ATG---AAA--------A-GA-A
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         33537 20 -     44753 TT---AG---------CA--A-AA--T-ATG---AAA--------A-GA-A
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            15458 20 +     27322 TT---AG---------CA--A-AA--T-ATG---AAA--------A-GA-A
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       15097 20 -     53241 TT---AG---------CA--A-AA--T-ATG---AAA--------A-GA-A
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         37368 20 -     48185 TT---AG---------CA--A-AA--T-ATG---AAA--------A-GA-A
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           31741 15 +     77221 -----------------A--G-AT--A-ATG---CAa--------a-gg-a
i Psammomys_obesus.NESX01026517.1                       I 2 C 0
s Pteronotus_parnellii.KE867983.1                            2557 21 -     27784 tt---aa---------ca--a-aa--t-ttg---aaa--------a-gaaa
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        244343 19 -    344369 TC---AC---------CA--A-AA--T-ATG---AAA--------A-GA--
i Pteronura_brasiliensis.PteBra_flattened_line_1343     I 1 I 2
s Pteropus_alecto.KB031157.1                             13244687 21 -  17261082 tt---at---------ca--a-aa--t-atg---aaa--------a-gaaa
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             602637 21 -   3946241 tt---at---------ca--a-aa--t-atg---aaa--------a-gaaa
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131532409 19 - 161321710 tc---at---------ca--a-aa--t-atg---aaa--------a-ta--
i Puma_concolor.QAVW01000427.1                          C 0 I 1
s Pygathrix_cinerea.k141_374971                             27455 20 +     56732 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6803946 20 +   6970761 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             3340 20 +     18040 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                14514 19 +     68503 TT---AT---------CA--A-AA--T-ATG---AAA--------A-GA--
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 I 1
s Rattus_norvegicus.chr11                                13913698 20 +  90463843 TA---G----A----C-A--A-GT--G-ATG---CAA--------A-ga-a
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1786501 17 +   2252614 tt---at---------ta--a-aa--t-atg---aaa--------a-----
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           13892 10 -     14454 TT---AG---------CA--A-AC--T------------------------
i Rhinopithecus_bieti.k119_102124                       C 0 I 26
s Rhinopithecus_roxellana.NC_044549.1                   206375218 20 - 206558726 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44854118 20 -  45163003 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                17977 21 +    109198 TT---AT---------CA--A-AA--T-ATG---AAA--------A-GAAA
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       6316 19 +     12214 TT---AC---------CA--A-AA--T-TTG---AAA--------A-GA--
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 I 1
s Saimiri_boliviensis.NW_024100938.1                     15670827 13 -  43202129 ----------------------AC--T-ATG---AAA--------G-GA-A
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        2693 13 +     34089 ----------------------AC--T-ATG---AAA--------G-GA-A
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              2634 13 -     60842 ----------------------AC--T-ATG---AAA--------G-GA-A
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              2729 13 +     67014 ----------------------AC--T-ATG---AAA--------G-GA-A
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              2707 13 +     60816 ----------------------AC--T-ATG---AAA--------G-GA-A
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 2644 13 -     76454 ----------------------AC--T-ATG---AAA--------G-GA-A
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17339400 13 -  30362882 ----------------------AC--T-ACA---AAA--------G-GA-A
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         18775 13 -     62485 ----------------------AC--T-ACA---AAA--------G-GA-A
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   30070 12 -    114521 TA---T----------CA--A-AA--T-ATG--------------------
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 I 8
s Semnopithecus_entellus.k141_1527475                       25882 20 +     26421 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       6342 20 +     20762 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         40077 20 +     40653 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                           10634 20 -     12194 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     24056 20 -     27512 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         33071 20 -     33692 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   97927 17 -    120886 TT---A--------GC-A--A-AT--C-ATC---CAA--------A-----
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            16694 16 +    739146 CT---A----------CA--A-AA--T-ATG---AAA--------A-----
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 I 1
s Spermophilus_dauricus.KZ294190.1                        2238189 14 +   2842873 tg---a-----------aC-A-AA--T-GTG---AA---------------
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             233095 16 -    276980 TC---AT---------CA--A-AA--T-AGG---AAA--------------
i Spilogale_gracilis.SpiGra_flattened_line_905          I 1 I 4
s Suricata_suricatta.SurSur_flattened_line_20339            25648 19 +     62062 TC---AT---------CA--A-AA--T-ATG---AAA--------A-GA--
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 I 1
s Sus_scrofa.CM000824.4                                 189270562 19 + 218635234 tt---at---------ca--a-aa--t-atg---aaa--------a-ag--
i Sus_scrofa.CM000824.4                                 C 0 I 1
s Symphalangus_syndactylus.tarseq_24                        13009 20 -  13920577 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               4489 15 -      6213 --------------------A-AA--T-ATG---AAA--------A-GAAA
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               13427 20 +     45698 TT---TG---------CA--A-AA--C-CTA---CAA--------A-GA-A
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      805427 19 +   1148477 TT---AC---------AA--A-AA--T-ATG---AAA--------A-GA--
i Tapirus_indicus.TapInd_scaffold_176                   C 0 I 2
s Tapirus_terrestris.TapTer_scaffold_14939                  56087 19 +     99546 TT---AC---------CA--A-AA--T-ATG---AAA--------A-GA--
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 I 2
s Tarsius_lariang.k141_609102                               24728 20 +     42269 TT---AG---------CA--A-AA--T-GTG---AAA--------A-GA-A
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               58044 20 +     65473 TT---AG---------CA--A-AA--T-GTG---AAA--------A-GA-A
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194005374 20 - 194193292 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             37558 20 -     47444 TT---A-----------TCAA-AA--T-GTC---AAA--------A-GA-A
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  2848 20 +      6782 TT---TG---------CA--A-AA--C-ATA---AAA--------A-GA-G
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  134566 21 -    259118 TT---AT---------CA--A-AA--T-ATG---AAA--------A-GAAA
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        24452 20 +     38948 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   18179 20 -     32910 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       24077 20 +     24652 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      2955 20 -      3559 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           40899 20 -     54611 TT---AG---------CA--A-AC--T-ATG---AGA--------G-GA-A
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       16900 20 +     17312 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    24263 20 -     25040 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          2924 20 +      3528 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  49291 20 +     51589 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       12467 20 +     14732 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       2944 20 -     28054 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44657739 20 -  44834318 TT---AG---------CA--A-AC--T-ATG---AAA--------G-GA-A
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        2748 20 +      3372 TT---AG---------CA--A-AC--T-ATG---AGA--------G-GA-A
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   3902 19 +     90398 TT---AT---------CA--A-AA--T-ATG---AAA--------A-GA--
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 I 1
s Trichechus_manatus.JH594618.1                          16080855 20 +  31416278 CT---AC---------CA--A-AC--A-GTG---AAA--------A-GG-A
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2790637 18 -   3938065 -----aa---------ca--a-aa--t-atg---aaa--------a-gg-a
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    3160 18 +     13056 -----AA---------CA--A-AA--T-ATG---AAA--------A-GG-A
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69312142 19 -  96451834 tt---at---------ca--a-aa--t-atg---aaa--------a-ga--
i Tursiops_truncatus.MRVK01000923.1                     C 0 I 1
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 25255 16 -     25548 TA---T----------CA--A-AT--T-ATG---AAA--------A-----
i Uropsilus_gracilis.UroGra_scaffold_4143_0             I 2 I 6
s Ursus_maritimus.KK498671.1                              6512901 19 +  28682327 tc---at---------ca--a-aa--t-atg---aaa--------a-ga--
i Ursus_maritimus.KK498671.1                            I 1 I 2
s Varecia_rubra.k141_432109                                  3514 20 -     20643 TT---AG---------CA--A-AA--T-ATG---GAA--------A-GA-A
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             23056 20 -     33872 TT---AG---------CA--A-AA--T-ATG---GAA--------A-GA-A
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1523367 19 -   2331223 tt---at---------ca--a-aa--t-atg---aaa--------a-ga--
i Vicugna_pacos.KN269600.1                              C 0 I 1
s Vulpes_lagopus.VulLag_flattened_line_2045                135838 19 -    281493 TC---AT---------CA--A-AA--T-ATG---AAA--------A-GA--
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 I 2
s Xerus_inauris.XerIna_scaffold_7898                       125279 14 -    134049 TT---A-----------GC-A-AA--T-GTG---AA---------------
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        212369 15 -    227762 TC---AT---------CA--A-AA--T-ATG---AA---------------
i Zalophus_californianus.ZalCal_flattened_line_4097     I 1 I 1
s Zapus_hudsonius.ZapHud_scaffold_64392                     13517 20 -     20485 TC---A--------GC-A--A-AT--T-ATG---AAA--------A-GA-A
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           5639 19 -      8775 TT---AT---------CA--A-AA--T-ATG---AAA--------A-GA--
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 I 1
e Sorex_araneus.JH798170.1                               17748817 583 -  27805282 I
e Mesoplodon_bidens.MesBid_scaffold_183284                   2166 255 +      2166 T
e Macaca_tonkeana.k141_2870633                               2864 158 -     27140 T
e Macaca_nigra.k141_282495                                   2859 158 -     46448 T
e Macaca_maura.k141_251854                                  43912 158 -     79256 T

a score=0.000000
s hg38.chr4_GL000008v2_random                               10017 11 +    209709 AG--T-T-TG-C-CTTT
s Acinonyx_jubatus.LLWD01000356.1                         2032088  2 +   3721120 aa---------------
i Acinonyx_jubatus.LLWD01000356.1                       I 1 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    110761 13 -    189883 AA-AC-T-TGAT-TTTT
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10655435  2 +  23371972 aa---------------
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 2 C 0
s Ailurus_fulgens.LNAC01000003.1                          7092360  2 -  16596857 aa---------------
i Ailurus_fulgens.LNAC01000003.1                        I 2 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   11073 12 -     22067 AA-TT-T-TG-A-ATTT
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_3103707                  61030 11 +     61638 AG--T-T-TG-C-CTTT
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        52842 11 +     53391 AG--T-T-TG-C-CTTT
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         3567 11 +     72529 AG--T-T-TG-C-CTTT
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          3142 11 +      3797 AG--T-T-TG-C-CTTT
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             8288 11 -     18050 AG--T-T-TG-C-TTTT
i Alouatta_belzebul.k141_1818029                        I 3 C 0
s Alouatta_caraya.k141_5460                                  9401 11 -     11521 AG--T-T-TG-C-TTTT
i Alouatta_caraya.k141_5460                             I 3 C 0
s Alouatta_discolor.k141_811576                              8965 11 -     21359 AG--T-T-TG-C-TTTT
i Alouatta_discolor.k141_811576                         I 3 C 0
s Alouatta_juara.k141_298055                                  256 11 +      1823 AG--T-T-TG-C-TTTT
i Alouatta_juara.k141_298055                            I 3 C 0
s Alouatta_macconnelli.k141_1331706                          8256 11 -     10438 AG--T-T-TG-C-TTTT
i Alouatta_macconnelli.k141_1331706                     I 3 C 0
s Alouatta_nigerrima.k141_2718643                            4912 11 +      7047 AG--T-T-TG-C-TTTT
i Alouatta_nigerrima.k141_2718643                       I 3 C 0
s Alouatta_palliata.k141_1316127                             8198 11 +     10410 AG--T-T-TG-C-TTTT
i Alouatta_palliata.k141_1316127                        I 3 C 0
s Alouatta_puruensis.k141_1284840                            2001 11 -      4927 AG--T-T-TG-C-TTTT
i Alouatta_puruensis.k141_1284840                       I 3 C 0
s Alouatta_seniculus.k141_990213                             4931 11 +      6429 AG--C-T-TG-C-TTTT
i Alouatta_seniculus.k141_990213                        I 3 C 0
s Ammotragus_lervia.NIVO01013474.1                        3518878  2 +   4113121 aa---------------
i Ammotragus_lervia.NIVO01013474.1                      I 1 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      389024  2 -    631301 AA---------------
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            29459  2 +     33004 AA---------------
i Antilocapra_americana.AntAmePen_scaffold_42841        I 1 C 0
s Aotus_azarae.k141_3170768                                 60654 11 +     78111 TG--T-T-TG-C-TTTT
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            3595 11 +     22701 TG--T-T-TG-C-TTTT
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5747552 11 +   9889416 tg--t-t-tg-c-tttt
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             4137 11 -    104377 TG--T-T-TG-C-TTTT
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               4143 11 +     23246 TG--T-T-TG-C-TTTT
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     2160 12 +      5067 AGC-T-T-TG-C-TCAT
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      16098 11 +     17483 AA--T-T-TG-C-TTTT
i Arctocebus_calabarensis.k141_1161114                  I 5 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 7421  2 -     29036 AA---------------
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9537387 11 +  39197703 AG--T-T-TG-C-TTTT
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             58671 11 +     85812 AG--T-T-TG-C-TTTT
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 9670 11 +     89302 AG--T-T-TG-C-TTTT
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             14175 11 -     58268 AG--T-T-TG-C-TTTT
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             62166 11 +    119057 AG--T-T-TG-C-TTTT
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               4135 11 -     25888 AA--T-T-TG-C-TTTT
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 4907 11 -     16375 AA--T-T-TG-C-TTTT
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              1226 11 +      2719 AA--T-T-TG-C-TTTT
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26378879  2 +  51448160 aa---------------
i Balaenoptera_acutorostrata.KI537095.1                 I 1 C 0
s Balaenoptera_bonaerensis.DF502048.1                        4111  2 -     13118 aa---------------
i Balaenoptera_bonaerensis.DF502048.1                   I 1 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   41940  2 -     72089 AA---------------
i Beatragus_hunteri.BeaHun_scaffold_21644               I 1 C 0
s Bison_bison.KN264915.1                                  6557971  2 +   6870073 ta---------------
i Bison_bison.KN264915.1                                I 1 C 0
s Bos_indicus.CM003021.1                                138138210  2 - 161108492 ta---------------
i Bos_indicus.CM003021.1                                I 1 C 0
s Bos_mutus.JH883513.1                                     570584  2 -    998990 ta---------------
i Bos_mutus.JH883513.1                                  I 1 C 0
s Bos_taurus.CM000177.6                                 136293943  2 - 158972876 ta---------------
i Bos_taurus.CM000177.6                                 I 1 C 0
s Bubalus_bubalis.KI419065.1                              1229698  2 -   1914593 ta---------------
i Bubalus_bubalis.KI419065.1                            I 1 C 0
s Cacajao_ayresi.k141_724503                               112027 11 -    171031 AG--T-T-TG-C-TTTT
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 11053 11 +    125063 AG--T-T-TG-C-TTTT
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                13101 11 -    216513 AG--T-T-TG-C-TTTT
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        5641 11 -    134917 AG--T-T-TG-C-TTTT
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3218278  2 -   8989139 aa---------------
i Camelus_bactrianus.KN276303.1                         I 1 C 0
s Camelus_dromedarius.KN271192.1                           395983  2 -  15254737 aa---------------
i Camelus_dromedarius.KN271192.1                        I 1 C 0
s Camelus_ferus.KB016973.1                                2971716  2 +   6889770 aa---------------
i Camelus_ferus.KB016973.1                              I 1 C 0
s CanFam4.chr31                                          11516813  2 +  39901454 AA---------------
i CanFam4.chr31                                         I 2 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   11831  2 +     87036 AA---------------
i Canis_lupus_VD.CanFam_VD_scaffold_16982               I 2 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11263474  2 -  35597290 aa---------------
i Canis_lupus_dingo.QKWQ01001993.1                      I 2 C 0
s Canis_lupus_familiaris.chr31                           11086003  2 +  39895921 aa---------------
i Canis_lupus_familiaris.chr31                          I 2 C 0
s Canis_lupus_orion.HG994411.1                           16453027  2 -  44759192 aa---------------
i Canis_lupus_orion.HG994411.1                          I 2 C 0
s Capra_aegagrus.CM003214.1                              21323954  2 + 157394656 aa---------------
i Capra_aegagrus.CM003214.1                             I 1 C 0
s Capra_hircus.CM004562.1                               135705181  2 - 157403528 aa---------------
i Capra_hircus.CM004562.1                               I 1 C 0
s Capromys_pilorides.CapPil_scaffold_979108                   260 12 -      1248 AA-TG-T-TT-C-TTCA
i Capromys_pilorides.CapPil_scaffold_979108             C 0 C 0
s Carlito_syrichta.NW_007248099.1                          307265 11 +    345090 aa--t-g-tt-c-tttg
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               58218  2 +     67245 AA---------------
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   28708 13 +     33760 AA-AC-TTCA-C-TTTC
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   157485  2 -    276539 AA---------------
i Catagonus_wagneri.CatWag_scaffold_1305                I 1 C 0
s Cavia_aperea.AVPZ01000278.1                            15784866 12 -  24422027 aa-tt-t-tt-c-ttca
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15796800 12 -  24440124 ta-tt-t-tt-c-ttca
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       174991 12 +    436027 TA-TT-T-TT-C-TTCA
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18888885 11 -  29618158 AG--T-T-TG-C-TTTT
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 6429 11 -     26817 AG--T-T-TG-C-TTTT
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                10669 11 +     25043 TG--T-T-TG-C-TTTT
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         6298 11 +     21754 AA--T-G-AA-C-TTTG
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4362596  2 +   7569818 aa---------------
i Ceratotherium_simum.JH767818.1                        I 2 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         2348  2 -      9338 AA---------------
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    I 2 C 0
s Cercocebus_atys.KQ010443.1                              6552826 11 +   6739814 AG--T-T-TG-C-CTTT
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      54303 11 -     54931 AG--T-T-TG-C-CTTT
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         19287 11 -     19697 AG--T-T-TG-C-CTTT
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         56818 11 -    107033 AG--T-T-TG-C-CTTT
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        3258 11 -      3853 AG--T-T-TG-C-CTTT
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          27189 11 +     30494 AG--T-T-TG-C-CTTT
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           3218 11 -      4022 AG--T-T-TG-C-CTTT
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          3107 11 -      3505 AG--T-T-TG-C-CTTT
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           21895 11 +     35983 AG--T-T-TG-C-CTTT
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11988432 11 +  12117833 AG--C-T-TG-C-CTTT
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46475185 11 +  46592721 AG--T-T-TG-C-CTTT
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      33014 11 +     33420 AG--T-T-TG-C-CTTT
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        3048 11 -      3443 AG--C-T-TG-C-CTTT
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      4046 11 -      4669 AG--T-T-TG-C-CTTT
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        3834 11 -      4411 AG--T-T-TG-C-CTTT
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         3369 11 -      4205 AG--T-T-TG-C-CTTT
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_2711798           380 12 -       616 AT-GT-T-TT-C-TTGA
i Chaetophractus_vellerosus.ChaVel_scaffold_2711798     C 0 C 0
s Cheirogaleus_major.k141_1157592                           57211 11 -     68416 AA--T-T-TG-C-TTTT
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            6253 11 +     13308 AA--T-T-TG-C-TTCT
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             3689 11 -     18223 AG--T-T-TG-C-TTTT
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             20712 11 +     25473 AG--T-T-TG-C-TTTT
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           39751 11 +     57117 AG--T-T-TG-C-TTTT
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          44426 11 +     54541 AG--T-T-TG-C-TTTT
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15960024 11 +  43084221 -a-tt-t-tt-c-ttca
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         69249 11 +    196370 AG--T-T-TG-C-TTTT
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          13429 11 +     40510 AG--T-T-TG-C-TTTT
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15136653 11 -  15256731 AG--T-T-TG-C-CTTT
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      31699 11 -     53260 AG--T-T-TG-C-CTTT
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101142148 11 + 101219884 AG--T-T-TG-C-CTTT
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                15172 11 -     21363 AA--T-T-TT-C-TTTA
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           760483 11 +    964067 aa--t-t-tt-c-ttta
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10880716 11 +  10971483 ag--t-t-tg-c-cttt
i Colobus_angolensis.KN985967.1                         I 2 C 0
s Colobus_guereza.LG08                                  147661873 11 + 156195979 AG--T-T-TG-C-Cttt
i Colobus_guereza.LG08                                  I 2 C 0
s Colobus_polykomos.k141_1406057                            13861 11 +     23629 AG--T-T-TG-C-Cttt
i Colobus_polykomos.k141_1406057                        I 2 C 0
s Condylura_cristata.JH655880.1                          60611344  2 +  78930452 gC---------------
i Condylura_cristata.JH655880.1                         I 9 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         38330  2 -     40477 AA---------------
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 276658 12 -    399297 AA-AC-C-TT-A-TTTT
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53027281 13 +  72327488 AACGC-T-TG-A-cttt
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            50103  2 -     70449 AA---------------
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 1 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  206435 12 -    956709 CA-AA-T-TT-C-TACA
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 28981 12 -     67205 AT-TG-T-TT-A-TTCA
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                16025 12 +     26546 AA-TT-T-TT-C-TTCA
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             57127 12 -    236241 AT-TT-T-TT-C-TTCA
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          180924 12 -   6883506 at-gt-t-tg-C-TTGA
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16843068 11 +  31942871 AA--T-T-TG-T-TTTT
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80035560  2 -  96802777 aa---------------
i Delphinapterus_leucas.KZ290064.1                      I 1 C 0
s Desmodus_rotundus.KZ672188.1                           18697528  2 -  18957592 aa---------------
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 321243  2 +    993696 aa---------------
i Dicerorhinus_sumatrensis.PEKH010003161.1              I 2 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   1895  2 +    151128 AA---------------
i Diceros_bicornis.DicBicMic_scaffold_9545              I 2 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   155915 12 +    228994 CA-TT-T-TT-C-TTCA
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3653628 13 +   4240102 AA-AT-TGTT-C-CCTT
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 25192 13 +     28912 AA-AT-TGTT-C-CCTT
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                34378 12 -     73477 AA-TT-T-TT-C-TTCA
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22993585 12 -  44670279 aaatg-t-gg-c-ttt-
i Echinops_telfairi.JH980316.1                          C 0 I 1
s Eidolon_helvum.KE772537.1                                 10907  2 +     24177 ta---------------
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1490227  2 +   1727528 aa---------------
i Elaphurus_davidianus.JRFZ01086400.1                   I 1 C 0
s Elephantulus_edwardii.JH947210.1                        7805379  8 +  15467074 AGGGT-T-TG-------
i Elephantulus_edwardii.JH947210.1                      C 0 I 83
s Ellobius_lutescens.LOEQ01003611.1                        237936 13 -    369425 AGAGC-T-TG-A-ATTA
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           4952 13 -      7838 AGAGC-T-TG-A-ATTA
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85869888  2 +  99434291 ca---------------
i Enhydra_lutris.KZ291749.1                             I 2 C 0
s Eptesicus_fuscus.JH977687.1                             4702481  2 +   6522550 aa---------------
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5851669  2 -   7175178 aa---------------
i Equus_asinus.JREZ01000062.1                           I 2 C 0
s Equus_caballus.CM000402.2                              13350172  2 +  41866177 aa---------------
i Equus_caballus.CM000402.2                             I 2 C 0
s Equus_przewalskii.ATBW01073585.1                          11662  2 +     92910 aa---------------
i Equus_przewalskii.ATBW01073585.1                      I 2 C 0
s Erinaceus_europaeus.JH835290.1                         11531215  2 +  16010500 ga---------------
i Erinaceus_europaeus.JH835290.1                        I 1 I 7
s Erythrocebus_patas.Contig8                             48768831 11 -  48907691 AG--T-T-TG-C-CTTT
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          313764  2 +    330699 AA---------------
i Eschrichtius_robustus.EscRob_flattened_line_685       I 1 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             60218  2 +     89355 AA---------------
i Eubalaena_japonica.EubJap_flattened_line_7756         I 1 C 0
s Eulemur_albifrons.k141_715837                              3258 11 +     13586 AA--T-T-TG-C-TTTT
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               3193 11 -      6809 AA--T-T-TG-C-TTTT
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             9668 11 +     36558 AA--T-T-TG-C-TTTT
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             5984 11 +     60246 AA--T-T-TG-C-TTTT
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 9466 11 +    109717 AA--T-T-TG-C-TTTT
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               13846 11 +     16540 AA--T-T-TG-C-TTTT
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                14121 11 +     27497 AA--T-T-TG-C-TTTT
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           16582 11 +     26808 AA--T-T-TG-C-TTTT
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                31311 11 +     46535 AA--T-T-TG-C-TTTT
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              14034 11 -     29447 AA--T-T-TG-C-TTTT
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129891064  2 - 159252932 aa---------------
i Felis_catus.CM001386.2                                I 1 C 0
s Felis_catus_fca126.CM031420.1                         129278136  2 - 158578461 aa---------------
i Felis_catus_fca126.CM031420.1                         I 1 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 19271  2 +     52776 AA---------------
i Felis_nigripes.FelNig_flattened_line_8080             I 1 C 0
s Fukomys_damarensis.KN123630.1                          13890973 12 -  19261668 at-at-t-tt-c-ttca
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     209166 11 -    847004 AA--C-T-TG-C-TTTT
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           11545 11 -     43889 AA--C-T-TG-C-TTTT
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           8613 11 +     27357 AA--T-T-TG-C-TTGT
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               154525 12 +    324696 AA-AT-T-TA-G-TTTT
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    180027  2 -    189561 aa---------------
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 1 C 0
s Glis_glis.GliGli_scaffold_79770                           10927 12 -     18683 AA-AT-T-TC-C-TTCT
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               3415 11 -     14630 AG--T-T-TG-C-CTTT
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119650514 11 - 195582420 AG--T-T-TG-C-CTTT
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   75664 12 +    118900 AA-AT-T-TG-C-TCCT
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                         3818 11 +      3980 AA--T-T-TG-C-TTTT
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             26294 11 +     26611 AA--T-T-TG-C-TTTT
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             3754 11 +     56096 AA--T-T-TG-C-TTTT
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        27031 11 -     42470 AA--T-T-TG-C-TTTT
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        43625 11 -     54384 AA--T-T-TG-C-TTTT
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              15311  2 +     53719 AG---------------
i Helogale_parvula.HelPar_flattened_line_22962          I 1 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                26226  2 -     91191 AA---------------
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 1 C 0
s Heterocephalus_glaber.JH602058.1                        2549361 12 +  31725842 aa-at-t-tt-c-ttca
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               55777 13 +     73687 AGAGT-T-TG-C-TTAA
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              145795  2 +    277961 AA---------------
i Hippopotamus_amphibius.HipAmp_scaffold_1308           I 1 C 0
s Hipposideros_armiger.JXIK01001085.1                      277112  2 -    477199 ga---------------
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              6271  2 -      9143 GA---------------
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg649                                   100087 11 +    115816 AG--T-T-TG-C-CTTT
i Hoolock_leuconedys.ctg649                                I 81 T 447
s Hyaena_hyaena.HyaHya_flattened_line_20729                 14406  2 -     67322 AA---------------
i Hyaena_hyaena.HyaHya_flattened_line_20729             I 1 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           17287 12 -    119109 AA-TT-T-TT-C-TTCA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              3227 11 +      5897 AG--T-T-TG-C-CTTT
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_1485652                              1647 11 -      1697 AG--T-T-TG-C-CTTT
i Hylobates_agilis.k141_1485652                         C 0 C 0
s Hylobates_klossii.k141_466549                              9671 11 +     11537 AG--T-T-TG-C-CTTT
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14622772 11 -  25970782 AG--T-T-TG-C-CTTT
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                              28 11 -      2977 AG--T-T-TG-C-CTTT
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             32159 11 -     60944 AG--T-T-TG-C-CTTT
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     4413 12 +     22540 AA-AT-T-TT-C-TTCA
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7124286 12 +  13083262 AAC-T-T-TG-C-TTCT
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_1884019                                   1499 11 -      2196 AT--T-T-TG-C-TTTT
i Indri_indri.k141_1884019                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               7548  2 +     17520 AA---------------
i Inia_geoffrensis.IniGeo_flattened_line_66725          I 1 C 0
s Jaculus_jaculus.JH725517.1                              8563826 13 +  11848649 ag-tttt-tg-a-attt
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               22378  2 +     37189 AA---------------
i Kogia_breviceps.KogBre_flattened_line_35920           I 1 C 0
s Lagothrix_lagothricha.k141_12968                          48256 11 -    147782 AG--T-T-TG-C-TTTT
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   112277  2 -    115756 AA---------------
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258405314 11 - 285822530 AA--T-T-TG-C-TTTT
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        22183 11 +     39228 AA--T-T-TG-C-TTTT
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            51558 11 +     63517 AA--T-T-TG-C-TTTT
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        76802 11 +    116806 AA--T-T-TG-C-TTTT
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     29822 11 -     33031 AA--T-T-TG-C-TTTT
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    11285  4 +     22452 -------------TTTT
i Lepus_americanus.LepAme_scaffold_62849                I 2 C 0
s Leptonychotes_weddellii.KB714749.1                      3084105  2 -   3498232 aa---------------
i Leptonychotes_weddellii.KB714749.1                    I 2 C 0
s Lipotes_vexillifer.KE558548.1                            134713  2 +   3060487 aa---------------
i Lipotes_vexillifer.KE558548.1                         I 1 C 0
s Lophocebus_aterrimus.ctg55                             19245914 11 +  19376315 AG--T-T-TG-C-CTTT
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            8908 12 +     84689 AA--T-G-TG-CTTTTT
i Loris_lydekkerianus.k141_550999                       I 7 C 0
s Loris_tardigradus.ctg97                                 3776659 12 +   6799190 AA--T-G-TG-CTTTTT
i Loris_tardigradus.ctg97                               I 7 C 0
s Loxodonta_africana.GL010040.1                          20590425 13 -  62548349 AAAGT-T-TG-C-CTGA
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11085459  2 +  39895028 aa---------------
i Lycaon_pictus.CM007556.1                              I 2 C 0
s Macaca_arctoides.k141_2201161                             17590 11 +     74745 AG--T-T-TG-C-CTTT
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12704100 11 +  12821369 AG--T-T-TG-C-CTTT
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               6196 11 +      6569 AG--T-T-TG-C-CTTT
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           44498 11 +     63263 AG--T-T-TG-C-CTTT
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_925451                                  506 11 +     10231 AG--T-T-TG-C-CTTT
i Macaca_fuscata.k119_925451                            C 0 C 0
s Macaca_leonina.k141_3421209                                2647 11 +      3017 AG--T-T-TG-C-CTTT
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_mulatta.NC_041755.1                            196033177 11 + 196197964 AG--T-T-TG-C-CTTT
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11443283 11 +  11645122 AG--T-T-TG-C-CTTT
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_radiata.k141_1580474                                3039 11 -      3617 AG--T-T-TG-C-CTTT
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 13369 11 -     55006 AG--T-T-TG-C-CTTT
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43838406 11 +  43892939 AG--T-T-TG-C-CTTT
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                5628 11 -      5978 AG--T-T-TG-C-CTTT
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                700322  2 +    802869 TA---------------
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43435076 11 -  43563597 AG--T-T-TG-C-CTTT
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4447902 11 -   4543643 AG--T-T-TG-C-CTTT
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            144815  2 +    252755 aa---------------
i Manis_javanica.JSZB01003966.1                         I 1 C 0
s Manis_pentadactyla.KN017078.1                             34890  2 +     58827 aa---------------
i Manis_pentadactyla.KN017078.1                         I 1 C 0
s Marmota_marmota.CZRN01000005.1                         36872121 12 +  64221397 AAC-T-T-TG-C-TTCT
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       62977  2 -    234502 GA---------------
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_146202             698  2 -      1999 AA---------------
i Mellivora_capensis.MelCap_flattened_line_146202       I 2 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               10216 12 +     15977 AA-AT-G-TGAT-TT-T
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1045020 13 -  26018355 AATTC-T-TG-A-CTTT
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Microcebus_murinus.CM007691.1                          16508428 11 +  47401472 aa--t-t-tg-c-tttt
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  30011 12 -     48017 AAATG-T-GG-C-TTT-
i Microgale_talazaci.MicTal_scaffold_34660              C 0 I 1
s Micronycteris_hirsuta.MicHir_scaffold_37978               21403  2 -     32043 AA---------------
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22818139 13 -  98408828 AGAGC-T-TG-A-ATTA
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8208151  2 +  10048721 AC---------------
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            32823  2 +     45743 AC---------------
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        33731 11 +     34273 AG--T-T-TG-C-CTTT
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         9613  2 -    104932 AA---------------
i Mirounga_angustirostris.MirAng_flattened_line_8852    I 2 C 0
s Mirza_zaza.k141_226143                                     3826 11 +      8497 AA--T-T-TG-C-TTTT
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 145148  2 +    154973 AA---------------
i Monodon_monoceros.MonMon_M_scaffold_5598              I 1 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                159909  2 +    265003 AA---------------
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 3329  2 -      4346 AA---------------
i Moschus_moschiferus.MosMos_scaffold_146101            I 1 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  143002  2 -    168139 AG---------------
i Mungos_mungo.MunMun_flattened_line_8729               I 1 C 0
s Murina_feae.MurFea_scaffold_2254                          17788  2 -    100666 AA---------------
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70764624 13 +  92629107 AA-Ac-t-tgaa-tttt
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75487664 13 +  98207768 aa-ac-t-tgaa-tttt
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67553855 12 +  89017189 -A-Ac-t-tgaa-tttt
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74328845 13 +  97876770 aa-ac-t-tgaa-tttt
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              9405 12 +     98495 AA-AT-T-TC-C-TTCT
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     88329  9 -    117718 ----G-T-TT-C-TTCA
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Mustela_putorius.JH417978.1                             4422270  2 -  28371801 aa---------------
i Mustela_putorius.JH417978.1                           I 2 C 0
s Myotis_brandtii.KE161952.1                               966113  2 +   8389877 aa---------------
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5017802  2 +   6462685 aa---------------
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3463699  2 -   3747815 aa---------------
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         8893  2 +     66751 AA---------------
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3772 11 -      8794 AA--T-T-TG-C-TTGA
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nasalis_larvatus.k141_153429                               6106 11 +     48152 AG--T-T-TG-C-CTTT
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4483005  2 -  14209539 aa---------------
i Neomonachus_schauinslandi.NINY01007774.1              I 2 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3949761  2 -   4490290 aa---------------
i Neophocaena_asiaeorientalis.KZ688543.1                I 1 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  48016  2 +     94413 AA---------------
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_302224                              76 11 +      1516 AG--T-T-TG-C-CTTT
i Nomascus_annamensis.k141_302224                       C 0 C 0
s Nomascus_concolor.k141_49591                               1197 11 +      2014 AG--T-T-TG-C-CTTT
i Nomascus_concolor.k141_49591                          C 0 C 0
s Nomascus_gabriellae.k141_642452                             122 11 +      2851 AG--T-T-TG-C-CTTT
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             23001 11 -  18771707 AG--T-T-TG-C-CTTT
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                   750 11 +      4512 AG--T-T-TG-C-CTTT
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Ochotona_princeps.JH802095.1                            4994262  4 -  23139505 -------------TTCT
i Ochotona_princeps.JH802095.1                          I 2 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                28452  2 +   3668941 aa---------------
i Nyctereutes_procyonoides.CAJHUB010000786.1            I 2 C 0
s Octodon_degus.JH651621.1                                3683823 12 +  10294119 AA-TG-T-TT-A-TTCA
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             677650  2 -   3126709 aa---------------
i Odobenus_rosmarus.KB229369.1                          I 1 C 0
s Odocoileus_virginianus.KZ101650.1                       1078457  2 +   1425656 aa---------------
i Odocoileus_virginianus.KZ101650.1                     I 1 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         35752  2 +     78940 aa---------------
i Okapia_johnstoni.LVCL01S0017931.1                     I 1 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  123407 13 +    145789 AGAGC-T-TG-A-ATTT
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  35171 11 +     62360 A--GC-T-TG-A-ATTC
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7223445  2 -   7562323 aa---------------
i Orcinus_orca.KB316965.1                               I 1 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              42363 13 -     66828 AGAGC-T-TG-T-TTTA
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141873947  4 + 163896628 -------------tttt
i Oryctolagus_cuniculus.CM000803.1                      I 2 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      305790  2 -    505867 aa---------------
i Otocyon_megalotis.JAEUCK010005121.1                   I 2 C 0
s Otolemur_crassicaudatus.k141_321880                       37256 11 +     38679 AA--T-T-TG-C-TTTT
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18006698 11 -  38779656 aa--t-t-tg-c-tttt
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134076019  2 - 275406953 aa---------------
i Ovis_aries.CM001582.2                                 I 1 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      77233  2 +    140051 AA---------------
i Ovis_canadensis.OviCan_scaffold_6251                  I 1 C 0
s Pan_paniscus.CM003386.1                               127572759 11 - 205426864 AG--T-T-TG-C-CTTT
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120149912 11 - 196562556 AG--T-T-TG-C-CTTT
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  32466  2 +    295523 AA---------------
i Panthera_onca.PanOnc_flattened_line_1615              I 1 C 0
s Panthera_pardus.KV860323.1                              3636200  2 +  18214204 aa---------------
i Panthera_pardus.KV860323.1                            I 1 C 0
s Panthera_tigris.KE721879.1                              5025847  2 -   6340057 aa---------------
i Panthera_tigris.KE721879.1                            I 1 C 0
s Pantholops_hodgsonii.KE114631.1                         1064880  2 -   1292953 aa---------------
i Pantholops_hodgsonii.KE114631.1                       I 1 C 0
s Papio_anubis.CM001492.2                               188153858 11 - 188283584 AG--T-T-TG-C-CTTT
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            50070 11 +     76494 AG--T-T-TG-C-CTTT
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47511255 11 +  47705337 AG--T-T-TG-C-CTTT
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 65232 11 -    104429 AG--T-T-TG-C-CTTT
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  15023 11 -     29451 AG--T-T-TG-C-CTTT
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                35426 11 +     35859 AG--T-T-TG-C-CTTT
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113762  2 -    135482 AA---------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 I 1 C 0
s Perodicticus_ibeanus.k141_117958                           3299 11 -     23713 AA--T-T-TG-C-TTTT
i Perodicticus_ibeanus.k141_117958                      I 5 C 0
s Perodicticus_potto.k141_713187                            22597 11 -     27972 AA--T-T-TG-C-TTTT
i Perodicticus_potto.k141_713187                        I 5 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      41208  9 -     45160 ------GGTT-G-CCGT
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4948351 13 -   8017169 AATGC-T-TG-A-ATTC
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    10517 12 -     36578 AT-TT-T-TT-T-TTCA
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            120062  2 -    122454 AA---------------
i Phocoena_phocoena.PhoPho_flattened_line_11948         I 1 C 0
s Piliocolobus_badius.k141_1497351                           3101 11 -      3310 AG--T-T-TG-C-CTTT
i Piliocolobus_badius.k141_1497351                      I 2 C 0
s Piliocolobus_gordonorum.k141_902470                       23006 11 -     82327 AG--T-T-TG-C-CTTT
i Piliocolobus_gordonorum.k141_902470                   I 2 C 0
s Piliocolobus_kirkii.k141_557609                           19753 11 +     19957 AG--T-T-TG-C-Cttt
i Piliocolobus_kirkii.k141_557609                       I 2 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26737767 11 +  26888534 ag--t-t-tg-c-cttt
i Piliocolobus_tephrosceles.PDMG02000036.1              I 2 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            95556  2 +    112873 AA---------------
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             41741 11 -     61926 AG--T-T-TG-C-TTTT
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        23170 11 +     78826 AG--T-T-TG-C-TTTT
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              7121 11 -     15800 AG--T-T-TG-C-TTTT
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        10319 11 -     16101 AG--T-T-TG-C-TTTT
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          3628 11 +      9673 AG--T-T-TG-C-TTTT
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13472622 11 -  19735023 AG--T-T-TG-C-TTTT
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           11530 11 -     31692 AG--T-T-TG-C-TTTT
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           4128  2 +     21690 AA---------------
i Platanista_gangetica.PlaMin_flattened_line_72990      I 1 C 0
s Plecturocebus_bernhardi.k141_959214                       20966 11 +     44506 AG--T-T-TG-C-TTTT
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        21176 11 +     67491 AG--T-T-TG-C-TTTT
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      11417 11 -     98129 AG--T-T-TG-C-TTTT
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     21022 11 +    147771 AG--T-T-TG-C-TTTT
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        21271 11 -     23762 AG--T-T-TG-C-TTTT
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          1738 11 -     55515 AG--T-T-TG-C-TTTT
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         21091 11 +    152463 AG--T-T-TG-C-TTTT
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      7851 11 +      8943 AG--T-T-TG-C-TTTT
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                         10811 11 +    134592 AG--T-T-TG-C-TTTT
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          21401 11 -     75465 AG--T-T-TG-C-TTTT
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              185303 11 -    373494 AG--T-T-TG-C-CTTT
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19805211 11 +  19899266 AG--T-T-TG-C-CTTT
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               3350 11 -     15069 AG--T-T-TG-C-CTTT
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              3484 11 +     14865 AG--T-T-TG-C-CTTT
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                75648 13 +     78963 AGAGT-T-TG-C-TTAA
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6846690 11 +  12164890 aa--t-t-tg-c-tttt
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    666003 11 -   2312742 aa--t-t-tg-c-tttt
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         1833 11 +     11805 AA--T-T-TG-C-TTTT
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           41168 11 +     52369 AA--T-T-TG-C-TTTT
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         33557 11 -     44753 AA--T-T-TG-C-TTTT
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            15478 11 +     27322 AA--T-T-TG-C-TTTT
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       15117 11 -     53241 AA--T-T-TG-C-TTTT
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         37388 11 -     48185 AA--T-T-TG-C-TTTT
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           31756 12 +     77221 aa-at-g-tgat-tt-t
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            2578  2 -     27784 aa---------------
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        244364  2 -    344369 AA---------------
i Pteronura_brasiliensis.PteBra_flattened_line_1343     I 2 C 0
s Pteropus_alecto.KB031157.1                             13244708  2 -  17261082 ta---------------
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             602658  2 -   3946241 ta---------------
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131532429  2 - 161321710 aa---------------
i Puma_concolor.QAVW01000427.1                          I 1 C 0
s Pygathrix_cinerea.k141_374971                             27475 11 +     56732 AG--T-T-TG-C-CTTT
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6803966 11 +   6970761 AG--T-T-TG-C-CTTT
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             3360 11 +     18040 AG--T-T-TG-C-CTTT
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                14534  2 +     68503 AA---------------
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 1 C 0
s Rattus_norvegicus.chr11                                13913718  7 +  90463843 aa-gc-t-tg-------
i Rattus_norvegicus.chr11                               C 0 I 5
s Rhinolophus_sinicus.LVEH01000179.1                      1786518  2 +   2252614 aa---------------
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206375238 11 - 206558726 AG--T-T-TG-C-CTTT
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44854138 11 -  45163003 AG--T-T-TG-C-CTTT
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                17998  2 +    109198 TA---------------
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       6336  2 +     12214 AA---------------
i Saiga_tatarica.SaiTat_scaffold_82192                  I 1 C 0
s Saimiri_boliviensis.NW_024100938.1                     15670840 11 -  43202129 AG--t-t-tg-c-tttt
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        2706 11 +     34089 AG--T-T-TG-C-TTTT
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              2647 11 -     60842 AG--T-T-TG-C-TTTT
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              2742 11 +     67014 AG--T-T-TG-C-TTTT
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              2720 11 +     60816 AG--T-T-TG-C-TTTT
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 2657 11 -     76454 AG--T-T-TG-C-TTTT
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17339413 11 -  30362882 AG--T-T-TG-C-TTTT
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         18788 11 -     62485 AG--T-T-TG-C-TTTT
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   30090  2 -    114521 GT---------------
i Scalopus_aquaticus.ScaAqu_scaffold_9300               I 8 C 0
s Semnopithecus_entellus.k141_1527475                       25902 11 +     26421 AG--T-T-TG-C-CTTT
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       6362 11 +     20762 AG--T-T-TG-C-CTTT
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         40097 11 +     40653 AG--T-T-TG-C-CTTT
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                           10654 11 -     12194 AG--T-T-TG-C-CTTT
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     24076 11 -     27512 AG--T-T-TG-C-CTTT
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         33091 11 -     33692 AG--T-T-TG-C-CTTT
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   97944 13 -    120886 AAAGT-T-TG-A-ATTT
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            16711  2 +    739146 GA---------------
i Solenodon_paradoxus.SolPar_flattened_line_1012        I 1 C 0
s Spermophilus_dauricus.KZ294190.1                        2238203 12 +   2842873 AAC-T-T-TG-C-TTCT
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             233115  2 -    276980 AA---------------
i Spilogale_gracilis.SpiGra_flattened_line_905          I 4 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            25668  2 +     62062 AG---------------
i Suricata_suricatta.SurSur_flattened_line_20339        I 1 C 0
s Sus_scrofa.CM000824.4                                 189270582  2 + 218635234 aa---------------
i Sus_scrofa.CM000824.4                                 I 1 C 0
s Symphalangus_syndactylus.tarseq_24                        13029 11 -  13920577 AG--T-T-TG-C-CTTT
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               4504  2 -      6213 AA---------------
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               13447 11 +     45698 AA--T-T-TG-C-TTGA
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      805448  2 +   1148477 AA---------------
i Tapirus_indicus.TapInd_scaffold_176                   I 2 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  56108  2 +     99546 AA---------------
i Tapirus_terrestris.TapTer_scaffold_14939              I 2 C 0
s Tarsius_lariang.k141_609102                               24748 11 +     42269 AA--T-G-TT-C-TTTG
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               58064 11 +     65473 AA--T-G-TT-C-TTTG
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194005394 11 - 194193292 AG--T-T-TG-C-CTTT
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             37578 12 -     47444 AA-AT-T-TT-C-TTCA
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  2868 12 +      6782 AT-GC-T-TT-C-TTGA
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  134587  2 -    259118 AA---------------
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        24472 11 +     38948 AG--T-T-TG-C-CTTT
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   18199 11 -     32910 AG--T-T-TG-C-CTTT
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       24097 11 +     24652 AG--T-T-TG-C-CTTT
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      2975 11 -      3559 AG--T-T-TG-C-CTTT
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           40919 11 -     54611 AG--T-T-TG-C-CTTT
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       16920 11 +     17312 AG--T-T-TG-C-CTTT
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    24283 11 -     25040 AG--T-T-TG-C-CTTT
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          2944 11 +      3528 AG--T-T-TG-C-CTTT
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  49311 11 +     51589 AG--T-T-TG-C-CTTT
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       12487 11 +     14732 AG--T-T-TG-C-CTTT
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       2964 11 -     28054 AG--T-T-TG-C-CTTT
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44657759 11 -  44834318 AG--T-T-TG-C-CTTT
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        2768 11 +      3372 AG--T-T-TG-C-CTTT
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   3922  2 +     90398 AA---------------
i Tragulus_javanicus.TraJav_scaffold_14717              I 1 C 0
s Trichechus_manatus.JH594618.1                          16080875 13 +  31416278 AAAGT-T-TC-C-TTGA
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2790655 12 -   3938065 aa-at-t-tg-C-TTTT
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    3178 12 +     13056 AA-AT-T-TG-C-TTTT
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69312162  2 -  96451834 aa---------------
i Tursiops_truncatus.MRVK01000923.1                     I 1 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 25277  2 -     25548 GT---------------
i Uropsilus_gracilis.UroGra_scaffold_4143_0             I 6 C 0
s Ursus_maritimus.KK498671.1                              6512922  2 +  28682327 aa---------------
i Ursus_maritimus.KK498671.1                            I 2 C 0
s Varecia_rubra.k141_432109                                  3534 11 -     20643 AA--T-T-TG-C-TTTT
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             23076 11 -     33872 AA--T-T-TG-C-TTTT
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1523387  2 -   2331223 aa---------------
i Vicugna_pacos.KN269600.1                              I 1 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                135859  2 -    281493 AA---------------
i Vulpes_lagopus.VulLag_flattened_line_2045             I 2 C 0
s Xerus_inauris.XerIna_scaffold_7898                       125293 12 -    134049 AAC-T-T-TG-C-TCCT
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        212385  2 -    227762 AA---------------
i Zalophus_californianus.ZalCal_flattened_line_4097     I 1 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     13537 12 -     20485 AA-TT-T-TG-A-ATTT
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           5659  2 -      8775 AA---------------
i Ziphius_cavirostris.ZipCav_flattened_line_127025      I 1 C 0
e Sorex_araneus.JH798170.1                               17748817 583 -  27805282 I
e Chrysochloris_asiatica.ChrAsi_scaffold_141308              8820 2035 -     12508 T
e Mesoplodon_bidens.MesBid_scaffold_183284                   2166 255 +      2166 T
e Crocidura_indochinensis.CroInd_scaffold_38409             18407  2 -     19186 I
e Rhinopithecus_bieti.k119_102124                           13902 26 -     14454 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65667885  0 +  89412551 C
e Nycticebus_coucang.k141_2051882                            2265  0 +      6470 C
e Nycticebus_bengalensis.LG16                            65565537  0 -  95554990 C
e Nannospalax_galili.KL201303.1                            108737  0 +    362372 C
e Macaca_tonkeana.k141_2870633                               2864 158 -     27140 T
e Macaca_nigra.k141_282495                                   2859 158 -     46448 T
e Macaca_maura.k141_251854                                  43912 158 -     79256 T

a score=0.000000
s hg38.chr4_GL000008v2_random                               10028 2 +    209709 T-C
s Acinonyx_jubatus.LLWD01000356.1                         2032090 2 +   3721120 t-t
i Acinonyx_jubatus.LLWD01000356.1                       C 0 I 9
s Acomys_cahirinus.AcoCah_scaffold_1625                    110774 2 -    189883 T-C
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10655437 2 +  23371972 t-t
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 I 9
s Ailurus_fulgens.LNAC01000003.1                          7092362 2 -  16596857 t-t
i Ailurus_fulgens.LNAC01000003.1                        C 0 I 9
s Allactaga_bullata.AllBul_scaffold_70162                   11085 2 -     22067 T-C
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_3103707                  61041 2 +     61638 T-C
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        52853 2 +     53391 T-C
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         3578 2 +     72529 T-C
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          3153 2 +      3797 T-C
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             8299 2 -     18050 C-A
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  9412 2 -     11521 C-A
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              8976 2 -     21359 C-A
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_298055                                  267 2 +      1823 C-A
i Alouatta_juara.k141_298055                            C 0 C 0
s Alouatta_macconnelli.k141_1331706                          8267 2 -     10438 C-A
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            4923 2 +      7047 C-A
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             8209 2 +     10410 C-A
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            2012 2 -      4927 C-A
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             4942 2 +      6429 C-A
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3518880 3 +   4113121 act
i Ammotragus_lervia.NIVO01013474.1                      C 0 I 9
s Anoura_caudifer.AnoCau_scaffold_422                      389026 2 -    631301 T-T
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 I 9
s Antilocapra_americana.AntAmePen_scaffold_42841            29461 3 +     33004 ACG
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 I 9
s Aotus_azarae.k141_3170768                                 60665 2 +     78111 C-A
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            3606 2 +     22701 C-A
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5747563 2 +   9889416 c-a
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             4148 2 -    104377 C-A
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               4154 2 +     23246 C-A
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     2172 2 +      5067 T-C
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      16109 2 +     17483 T-C
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 7423 2 -     29036 T-T
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 I 9
s Ateles_geoffroyi_b.tarseq_2582                             9537398 2 +  39197703 C-A
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             58682 2 +     85812 C-A
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 9681 2 +     89302 C-A
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             14186 2 -     58268 C-A
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             62177 2 +    119057 C-A
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               4146 2 -     25888 C-A
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 4918 2 -     16375 T-C
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              1237 2 +      2719 T-C
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26378881 2 +  51448160 a-t
i Balaenoptera_acutorostrata.KI537095.1                 C 0 I 10
s Balaenoptera_bonaerensis.DF502048.1                        4113 2 -     13118 a-t
i Balaenoptera_bonaerensis.DF502048.1                   C 0 I 10
s Beatragus_hunteri.BeaHun_scaffold_21644                   41942 3 -     72089 ACT
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 I 9
s Bison_bison.KN264915.1                                  6557973 3 +   6870073 act
i Bison_bison.KN264915.1                                C 0 I 9
s Bos_indicus.CM003021.1                                138138212 3 - 161108492 act
i Bos_indicus.CM003021.1                                C 0 I 9
s Bos_mutus.JH883513.1                                     570586 3 -    998990 act
i Bos_mutus.JH883513.1                                  C 0 I 9
s Bos_taurus.CM000177.6                                 136293945 3 - 158972876 act
i Bos_taurus.CM000177.6                                 C 0 I 9
s Bubalus_bubalis.KI419065.1                              1229700 3 -   1914593 act
i Bubalus_bubalis.KI419065.1                            C 0 I 9
s Cacajao_ayresi.k141_724503                               112038 2 -    171031 C-A
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 11064 2 +    125063 C-A
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                13112 2 -    216513 C-A
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        5652 2 -    134917 C-A
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3218280 2 -   8989139 a-t
i Camelus_bactrianus.KN276303.1                         C 0 I 10
s Camelus_dromedarius.KN271192.1                           395985 2 -  15254737 a-t
i Camelus_dromedarius.KN271192.1                        C 0 I 10
s Camelus_ferus.KB016973.1                                2971718 2 +   6889770 a-t
i Camelus_ferus.KB016973.1                              C 0 I 10
s CanFam4.chr31                                          11516815 2 +  39901454 T-C
i CanFam4.chr31                                         C 0 I 9
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   11833 2 +     87036 T-C
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 I 9
s Canis_lupus_dingo.QKWQ01001993.1                       11263476 2 -  35597290 t-c
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 I 9
s Canis_lupus_familiaris.chr31                           11086005 2 +  39895921 t-c
i Canis_lupus_familiaris.chr31                          C 0 I 9
s Canis_lupus_orion.HG994411.1                           16453029 2 -  44759192 t-c
i Canis_lupus_orion.HG994411.1                          C 0 I 9
s Capra_aegagrus.CM003214.1                              21323956 3 + 157394656 act
i Capra_aegagrus.CM003214.1                             C 0 I 9
s Capra_hircus.CM004562.1                               135705183 3 - 157403528 act
i Capra_hircus.CM004562.1                               C 0 I 9
s Capromys_pilorides.CapPil_scaffold_979108                   272 2 -      1248 T-C
i Capromys_pilorides.CapPil_scaffold_979108             C 0 C 0
s Carlito_syrichta.NW_007248099.1                          307276 2 +    345090 t-C
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               58220 2 +     67245 T-T
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 I 9
s Castor_canadensis.CasCan_scaffold_47037                   28721 2 +     33760 C-C
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   157487 2 -    276539 A-T
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 I 11
s Cavia_aperea.AVPZ01000278.1                            15784878 2 -  24422027 t-c
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15796812 2 -  24440124 t-c
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       175003 2 +    436027 T-C
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18888896 2 -  29618158 C-A
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 6440 2 -     26817 C-A
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                10680 2 +     25043 C-A
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         6309 2 +     21754 T-C
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4362598 2 +   7569818 t-t
i Ceratotherium_simum.JH767818.1                        C 0 I 9
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         2350 2 -      9338 T-T
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 I 9
s Cercocebus_atys.KQ010443.1                              6552837 2 +   6739814 T-C
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      54314 2 -     54931 T-C
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         19298 2 -     19697 T-C
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         56829 2 -    107033 T-C
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        3269 2 -      3853 T-C
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          27200 2 +     30494 T-C
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           3229 2 -      4022 T-C
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          3118 2 -      3505 T-C
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           21906 2 +     35983 T-C
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11988443 2 +  12117833 T-C
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46475196 2 +  46592721 T-C
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      33025 2 +     33420 T-C
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        3059 2 -      3443 T-C
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      4057 2 -      4669 T-C
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        3845 2 -      4411 T-C
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         3380 2 -      4205 T-C
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_2711798           392 2 -       616 T-T
i Chaetophractus_vellerosus.ChaVel_scaffold_2711798     C 0 I 4
s Cheirogaleus_major.k141_1157592                           57222 2 -     68416 T-C
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            6264 2 +     13308 T-C
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             3700 2 -     18223 C-A
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             20723 2 +     25473 C-A
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           39762 2 +     57117 C-A
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          44437 2 +     54541 C-A
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15960035 2 +  43084221 t-c
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         69260 2 +    196370 C-A
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          13440 2 +     40510 C-A
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15136664 2 -  15256731 T-C
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      31710 2 -     53260 T-C
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101142159 2 + 101219884 T-C
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                15183 2 -     21363 T-T
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 I 4
s Choloepus_hoffmanni.KN194586.1                           760494 2 +    964067 t-t
i Choloepus_hoffmanni.KN194586.1                        C 0 I 4
s Colobus_angolensis.KN985967.1                          10880727 2 +  10971483 t-c
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147661884 2 + 156195979 t-c
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            13872 2 +     23629 t-c
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60611346 2 +  78930452 T-T
i Condylura_cristata.JH655880.1                         C 0 I 4
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         38332 2 -     40477 T-T
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 I 9
s Cricetomys_gambianus.CriGam_scaffold_949                 276670 2 -    399297 T-C
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53027294 2 +  72327488 t-c
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            50105 2 -     70449 T-T
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 I 9
s Ctenodactylus_gundi.CteGun_scaffold_447                  206447 2 -    956709 T-G
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 28993 2 -     67205 A-C
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                16037 2 +     26546 T-C
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             57139 2 -    236241 T-C
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          180936 2 -   6883506 T-T
i Dasypus_novemcinctus.JH568778.1                       C 0 I 4
s Daubentonia_madagascariensis.ctg11                     16843079 2 +  31942871 C-C
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80035562 2 -  96802777 a-t
i Delphinapterus_leucas.KZ290064.1                      C 0 I 10
s Desmodus_rotundus.KZ672188.1                           18697530 2 -  18957592 t-t
i Desmodus_rotundus.KZ672188.1                          C 0 I 9
s Dicerorhinus_sumatrensis.PEKH010003161.1                 321245 2 +    993696 t-t
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 I 9
s Diceros_bicornis.DicBicMic_scaffold_9545                   1897 2 +    151128 T-T
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 I 9
s Dinomys_branickii.DinBra_scaffold_1996                   155927 2 +    228994 T-C
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3653641 2 +   4240102 A-C
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 25205 2 +     28912 A-C
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                34390 2 -     73477 T-C
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Eidolon_helvum.KE772537.1                                 10909 2 +     24177 t-t
i Eidolon_helvum.KE772537.1                             C 0 I 9
s Elaphurus_davidianus.JRFZ01086400.1                     1490229 3 +   1727528 cct
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 I 9
s Elephantulus_edwardii.JH947210.1                        7805470 2 +  15467074 g-c
i Elephantulus_edwardii.JH947210.1                      I 83 I 4
s Ellobius_lutescens.LOEQ01003611.1                        237949 2 -    369425 T-C
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           4965 2 -      7838 T-C
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85869890 2 +  99434291 t-t
i Enhydra_lutris.KZ291749.1                             C 0 I 9
s Eptesicus_fuscus.JH977687.1                             4702483 2 +   6522550 c-t
i Eptesicus_fuscus.JH977687.1                           C 0 I 9
s Equus_asinus.JREZ01000062.1                             5851671 2 -   7175178 t-g
i Equus_asinus.JREZ01000062.1                           C 0 I 9
s Equus_caballus.CM000402.2                              13350174 2 +  41866177 t-g
i Equus_caballus.CM000402.2                             C 0 I 9
s Equus_przewalskii.ATBW01073585.1                          11664 2 +     92910 t-g
i Equus_przewalskii.ATBW01073585.1                      C 0 I 9
s Erinaceus_europaeus.JH835290.1                         11531224 2 +  16010500 t-t
i Erinaceus_europaeus.JH835290.1                        I 7 I 4
s Erythrocebus_patas.Contig8                             48768842 2 -  48907691 T-C
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          313766 2 +    330699 A-T
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 I 10
s Eubalaena_japonica.EubJap_flattened_line_7756             60220 2 +     89355 A-T
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 I 10
s Eulemur_albifrons.k141_715837                              3269 2 +     13586 T-C
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               3204 2 -      6809 T-C
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             9679 2 +     36558 T-C
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             5995 2 +     60246 T-C
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 9477 2 +    109717 T-C
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               13857 2 +     16540 T-C
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                14132 2 +     27497 T-C
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           16593 2 +     26808 T-C
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                31322 2 +     46535 C-C
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              14045 2 -     29447 C-C
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129891066 2 - 159252932 t-t
i Felis_catus.CM001386.2                                C 0 I 9
s Felis_catus_fca126.CM031420.1                         129278138 2 - 158578461 t-t
i Felis_catus_fca126.CM031420.1                         C 0 I 9
s Felis_nigripes.FelNig_flattened_line_8080                 19273 2 +     52776 T-T
i Felis_nigripes.FelNig_flattened_line_8080             C 0 I 9
s Fukomys_damarensis.KN123630.1                          13890985 2 -  19261668 t-c
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     209177 2 -    847004 T-C
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           11556 2 -     43889 T-C
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           8624 2 +     27357 T-C
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               154537 2 +    324696 C-C
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    180029 3 -    189561 act
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 I 9
s Glis_glis.GliGli_scaffold_79770                           10939 2 -     18683 T-C
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               3426 2 -     14630 T-C
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119650525 2 - 195582420 T-C
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   75676 2 +    118900 T-T
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                         3829 2 +      3980 T-C
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             26305 2 +     26611 T-C
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             3765 2 +     56096 T-C
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        27042 2 -     42470 T-C
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        43636 2 -     54384 T-C
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              15313 2 +     53719 T-T
i Helogale_parvula.HelPar_flattened_line_22962          C 0 I 9
s Hemitragus_hylocrius.HemHyl_scaffold_16669                26228 3 -     91191 ACT
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 I 8
s Heterocephalus_glaber.JH602058.1                        2549373 2 +  31725842 t-c
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               55790 2 +     73687 T-C
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 I 4
s Hippopotamus_amphibius.HipAmp_scaffold_1308              145797 2 +    277961 A-T
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 I 10
s Hipposideros_armiger.JXIK01001085.1                      277114 2 -    477199 t-T
i Hipposideros_armiger.JXIK01001085.1                   C 0 I 9
s Hipposideros_galeritus.HipGal_scaffold_104691              6273 2 -      9143 T-T
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 I 9
s Hoolock_leuconedys.ctg79                                      2673 2 -   7690867 T-C
i Hoolock_leuconedys.ctg79                                 I 11 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 14408 2 -     67322 C-T
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 I 9
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           17299 2 -    119109 T-C
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              3238 2 +      5897 T-C
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_1485652                              1658 2 -      1697 T-C
i Hylobates_agilis.k141_1485652                         C 0 C 0
s Hylobates_klossii.k141_466549                              9682 2 +     11537 T-C
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14622783 2 -  25970782 T-C
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                              39 2 -      2977 T-C
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             32170 2 -     60944 T-C
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     4425 2 +     22540 T-C
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7124298 2 +  13083262 T-C
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_1884019                                   1510 2 -      2196 T-C
i Indri_indri.k141_1884019                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               7550 2 +     17520 A-T
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 I 10
s Jaculus_jaculus.JH725517.1                              8563839 2 +  11848649 t-c
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               22380 2 +     37189 A-T
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 I 10
s Lagothrix_lagothricha.k141_12968                          48267 2 -    147782 C-A
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   112279 2 -    115756 C-T
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 I 9
s Lemur_catta.scaffold_1                                258405325 2 - 285822530 T-C
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        22194 2 +     39228 T-C
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            51569 2 +     63517 T-C
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        76813 2 +    116806 T-C
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     29833 2 -     33031 T-C
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3084107 2 -   3498232 t-t
i Leptonychotes_weddellii.KB714749.1                    C 0 I 9
s Lepus_americanus.LepAme_scaffold_62849                    11289 2 +     22452 T-C
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            134715 2 +   3060487 a-t
i Lipotes_vexillifer.KE558548.1                         C 0 I 10
s Lophocebus_aterrimus.ctg55                             19245925 2 +  19376315 T-C
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            8920 2 +     84689 T-C
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3776671 2 +   6799190 T-C
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20590438 2 -  62548349 T-C
i Loxodonta_africana.GL010040.1                         C 0 I 4
s Lycaon_pictus.CM007556.1                               11085461 2 +  39895028 t-c
i Lycaon_pictus.CM007556.1                              C 0 I 9
s Macaca_arctoides.k141_2201161                             17601 2 +     74745 T-C
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12704111 2 +  12821369 T-C
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               6207 2 +      6569 T-C
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           44509 2 +     63263 T-C
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_925451                                  517 2 +     10231 T-C
i Macaca_fuscata.k119_925451                            C 0 C 0
s Macaca_leonina.k141_3421209                                2658 2 +      3017 T-C
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_mulatta.NC_041755.1                            196033188 2 + 196197964 T-C
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11443294 2 +  11645122 T-C
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_radiata.k141_1580474                                3050 2 -      3617 T-C
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 13380 2 -     55006 T-C
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43838417 2 +  43892939 T-C
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                5639 2 -      5978 T-C
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                700324 2 +    802869 T-G
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 I 9
s Mandrillus_leucophaeus.scaffold125                     43435087 2 -  43563597 T-C
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4447913 2 -   4543643 T-C
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            144817 2 +    252755 t-c
i Manis_javanica.JSZB01003966.1                         C 0 I 10
s Manis_pentadactyla.KN017078.1                             34892 2 +     58827 t-c
i Manis_pentadactyla.KN017078.1                         C 0 I 10
s Marmota_marmota.CZRN01000005.1                         36872133 2 +  64221397 T-C
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       62979 2 -    234502 C-T
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 I 9
s Mellivora_capensis.MelCap_flattened_line_146202             700 2 -      1999 T-T
i Mellivora_capensis.MelCap_flattened_line_146202       C 0 I 9
s Meriones_unguiculatus.MerUng_scaffold_52233               10228 2 +     15977 T-C
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1045033 2 -  26018355 T-C
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Microcebus_murinus.CM007691.1                          16508439 2 +  47401472 t-c
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               21405 2 -     32043 T-T
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 I 9
s Microtus_ochrogaster.CM001673.1                        22818152 2 -  98408828 T-C
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8208153 2 +  10048721 T-T
i Miniopterus_natalensis.LDJU01000022.1                 C 0 I 9
s Miniopterus_schreibersii.MinSch_scaffold_24116            32825 2 +     45743 T-T
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 I 9
s Miopithecus_ogouensis.k141_2666161                        33742 2 +     34273 T-C
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         9615 2 -    104932 T-T
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 I 9
s Mirza_zaza.k141_226143                                     3837 2 +      8497 T-C
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 145150 2 +    154973 A-T
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 I 10
s Mormoops_blainvillei.MorMeg_scaffold_2952                159911 2 +    265003 A-T
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 I 9
s Moschus_moschiferus.MosMos_scaffold_146101                 3331 3 -      4346 AAC
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 I 9
s Mungos_mungo.MunMun_flattened_line_8729                  143004 2 -    168139 T-T
i Mungos_mungo.MunMun_flattened_line_8729               C 0 I 9
s Murina_feae.MurFea_scaffold_2254                          17790 2 -    100666 T-T
i Murina_feae.MurFea_scaffold_2254                      C 0 I 9
s Mus_caroli.LT608236.1                                  70764637 2 +  92629107 t-c
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75487677 2 +  98207768 t-t
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67553867 2 +  89017189 t-c
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74328858 2 +  97876770 t-c
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              9417 2 +     98495 T-C
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4422272 2 -  28371801 t-t
i Mustela_putorius.JH417978.1                           C 0 I 9
s Myocastor_coypus.MyoCoy_scaffold_3653                     88338 2 -    117718 T-C
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               966115 2 +   8389877 t-t
i Myotis_brandtii.KE161952.1                            C 0 I 9
s Myotis_davidii.KB114863.1                               5017804 2 +   6462685 t-t
i Myotis_davidii.KB114863.1                             C 0 I 9
s Myotis_lucifugus.GL429887.1                             3463701 2 -   3747815 t-t
i Myotis_lucifugus.GL429887.1                           C 0 I 9
s Myotis_myotis.MyoMyo_scaffold_6123                         8895 2 +     66751 T-T
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 I 9
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3783 2 -      8794 T-T
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 I 4
s Nasalis_larvatus.k141_153429                               6117 2 +     48152 T-C
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4483007 2 -  14209539 t-t
i Neomonachus_schauinslandi.NINY01007774.1              C 0 I 9
s Neophocaena_asiaeorientalis.KZ688543.1                  3949763 2 -   4490290 a-t
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 I 10
s Noctilio_leporinus.NocLep_scaffold_12062                  48018 2 +     94413 C-T
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 I 9
s Nomascus_annamensis.k141_302224                              87 2 +      1516 T-C
i Nomascus_annamensis.k141_302224                       C 0 C 0
s Nomascus_concolor.k141_49591                               1208 2 +      2014 T-C
i Nomascus_concolor.k141_49591                          C 0 C 0
s Nomascus_gabriellae.k141_642452                             133 2 +      2851 T-C
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             23012 2 -  18771707 T-C
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                   761 2 +      4512 T-C
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                28454 2 +   3668941 t-c
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 I 9
s Ochotona_princeps.JH802095.1                            4994266 2 -  23139505 T-C
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3683835 2 +  10294119 A-C
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             677652 2 -   3126709 t-t
i Odobenus_rosmarus.KB229369.1                          C 0 I 9
s Odocoileus_virginianus.KZ101650.1                       1078459 3 +   1425656 act
i Odocoileus_virginianus.KZ101650.1                     C 0 I 9
s Okapia_johnstoni.LVCL01S0017931.1                         35754 3 +     78940 act
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 I 9
s Ondatra_zibethicus.OndZib_scaffold_6821                  123420 2 +    145789 T-C
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  35182 2 +     62360 T-C
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7223447 2 -   7562323 a-t
i Orcinus_orca.KB316965.1                               C 0 I 10
s Orycteropus_afer.OryAfe_flattened_line_13509              42376 2 -     66828 T-C
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 I 4
s Oryctolagus_cuniculus.CM000803.1                      141873951 2 + 163896628 t-c
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      305792 2 -    505867 t-c
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 I 9
s Otolemur_crassicaudatus.k141_321880                       37267 2 +     38679 T-C
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18006709 2 -  38779656 t-c
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134076021 3 - 275406953 act
i Ovis_aries.CM001582.2                                 C 0 I 9
s Ovis_canadensis.OviCan_scaffold_6251                      77235 3 +    140051 ACT
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 I 9
s Pan_paniscus.CM003386.1                               127572770 2 - 205426864 T-C
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120149923 2 - 196562556 T-C
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  32468 2 +    295523 T-T
i Panthera_onca.PanOnc_flattened_line_1615              C 0 I 9
s Panthera_pardus.KV860323.1                              3636202 2 +  18214204 t-t
i Panthera_pardus.KV860323.1                            C 0 I 9
s Panthera_tigris.KE721879.1                              5025849 2 -   6340057 t-t
i Panthera_tigris.KE721879.1                            C 0 I 9
s Pantholops_hodgsonii.KE114631.1                         1064882 3 -   1292953 act
i Pantholops_hodgsonii.KE114631.1                       C 0 I 9
s Papio_anubis.CM001492.2                               188153869 2 - 188283584 T-C
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            50081 2 +     76494 T-C
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47511266 2 +  47705337 T-C
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 65243 2 -    104429 T-C
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  15034 2 -     29451 T-C
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                35437 2 +     35859 T-C
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113764 2 -    135482 T-T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 I 33
s Perodicticus_ibeanus.k141_117958                           3310 2 -     23713 T-C
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            22608 2 -     27972 T-C
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      41217 2 -     45160 A-C
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4948364 2 -   8017169 T-c
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    10529 2 -     36578 A-C
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            120064 2 -    122454 A-T
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 I 10
s Piliocolobus_badius.k141_1497351                           3112 2 -      3310 T-C
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       23017 2 -     82327 T-C
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           19764 2 +     19957 t-c
i Piliocolobus_kirkii.k141_557609                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26737778 2 +  26888534 t-c
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            95558 2 +    112873 C-T
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 I 10
s Pithecia_albicans.k141_991845                             41752 2 -     61926 C-A
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        23181 2 +     78826 C-A
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              7132 2 -     15800 C-A
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        10330 2 -     16101 C-A
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          3639 2 +      9673 C-A
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13472633 2 -  19735023 C-A
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           11541 2 -     31692 C-A
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           4130 2 +     21690 A-T
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 I 10
s Plecturocebus_bernhardi.k141_959214                       20977 2 +     44506 C-A
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        21187 2 +     67491 C-A
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      11428 2 -     98129 C-A
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     21033 2 +    147771 C-A
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        21282 2 -     23762 C-A
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          1749 2 -     55515 C-A
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         21102 2 +    152463 C-A
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      7862 2 +      8943 C-A
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                         10822 2 +    134592 C-A
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          21412 2 -     75465 C-A
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              185314 2 -    373494 T-C
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19805222 2 +  19899266 T-C
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               3361 2 -     15069 T-C
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              3495 2 +     14865 T-C
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                75661 2 +     78963 T-C
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 I 4
s Prolemur_simus.MPIZ01000048.1                           6846701 2 +  12164890 t-c
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    666014 2 -   2312742 t-c
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         1844 2 +     11805 T-C
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           41179 2 +     52369 T-C
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         33568 2 -     44753 T-C
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            15489 2 +     27322 T-C
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       15128 2 -     53241 T-C
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         37399 2 -     48185 T-C
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           31768 2 +     77221 t-c
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            2580 2 -     27784 a-t
i Pteronotus_parnellii.KE867983.1                       C 0 I 8
s Pteronura_brasiliensis.PteBra_flattened_line_1343        244366 2 -    344369 T-T
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 I 9
s Pteropus_alecto.KB031157.1                             13244710 2 -  17261082 t-t
i Pteropus_alecto.KB031157.1                            C 0 I 9
s Pteropus_vampyrus.KN525959.1                             602660 2 -   3946241 t-t
i Pteropus_vampyrus.KN525959.1                          C 0 I 9
s Puma_concolor.QAVW01000427.1                          131532431 2 - 161321710 t-t
i Puma_concolor.QAVW01000427.1                          C 0 I 9
s Pygathrix_cinerea.k141_374971                             27486 2 +     56732 T-C
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6803977 2 +   6970761 T-C
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             3371 2 +     18040 T-C
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                14536 3 +     68503 ACT
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 I 9
s Rattus_norvegicus.chr11                                13913730 2 +  90463843 t-c
i Rattus_norvegicus.chr11                               I 5 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1786520 2 +   2252614 t-t
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 I 9
s Rhinopithecus_roxellana.NC_044549.1                   206375249 2 - 206558726 T-C
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44854149 2 -  45163003 T-C
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                18000 2 +    109198 T-T
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 I 9
s Saiga_tatarica.SaiTat_scaffold_82192                       6338 3 +     12214 ACT
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 I 9
s Saimiri_boliviensis.NW_024100938.1                     15670851 2 -  43202129 c-a
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        2717 2 +     34089 C-A
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              2658 2 -     60842 C-A
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              2753 2 +     67014 C-A
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              2731 2 +     60816 C-A
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 2668 2 -     76454 C-A
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17339424 2 -  30362882 C-A
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         18799 2 -     62485 C-A
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   30092 2 -    114521 T-C
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 I 4
s Semnopithecus_entellus.k141_1527475                       25913 2 +     26421 T-C
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       6373 2 +     20762 T-C
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         40108 2 +     40653 T-C
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                           10665 2 -     12194 T-C
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     24087 2 -     27512 T-C
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         33102 2 -     33692 T-C
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   97957 2 -    120886 T-C
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            16713 2 +    739146 T-T
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 I 4
s Spermophilus_dauricus.KZ294190.1                        2238215 2 +   2842873 T-C
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             233117 2 -    276980 T-T
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 I 9
s Suricata_suricatta.SurSur_flattened_line_20339            25670 2 +     62062 T-T
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 I 9
s Sus_scrofa.CM000824.4                                 189270584 2 + 218635234 a-t
i Sus_scrofa.CM000824.4                                 C 0 I 11
s Symphalangus_syndactylus.tarseq_24                        13040 2 -  13920577 T-C
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               4506 2 -      6213 T-T
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 I 9
s Tamandua_tetradactyla.TamTet_scaffold_26877               13458 2 +     45698 T-T
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 I 4
s Tapirus_indicus.TapInd_scaffold_176                      805450 2 +   1148477 T-T
i Tapirus_indicus.TapInd_scaffold_176                   C 0 I 9
s Tapirus_terrestris.TapTer_scaffold_14939                  56110 2 +     99546 T-T
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 I 9
s Tarsius_lariang.k141_609102                               24759 2 +     42269 T-C
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               58075 2 +     65473 T-C
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194005405 2 - 194193292 T-C
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             37590 2 -     47444 A-C
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  2880 2 +      6782 T-T
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 I 4
s Tonatia_saurophila.TonSau_scaffold_3334                  134589 2 -    259118 T-T
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 I 9
s Trachypithecus_auratus.k141_738098                        24483 2 +     38948 T-C
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   18210 2 -     32910 T-C
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       24108 2 +     24652 T-C
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      2986 2 -      3559 T-C
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           40930 2 -     54611 T-C
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       16931 2 +     17312 T-C
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    24294 2 -     25040 T-C
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          2955 2 +      3528 T-C
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  49322 2 +     51589 T-C
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       12498 2 +     14732 T-C
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       2975 2 -     28054 T-C
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44657770 2 -  44834318 T-C
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        2779 2 +      3372 T-C
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   3924 2 +     90398 A-T
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 I 9
s Trichechus_manatus.JH594618.1                          16080888 2 +  31416278 T-C
i Trichechus_manatus.JH594618.1                         C 0 I 4
s Tupaia_chinensis.KB320831.1                             2790667 2 -   3938065 T-C
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    3190 2 +     13056 T-C
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69312164 2 -  96451834 a-t
i Tursiops_truncatus.MRVK01000923.1                     C 0 I 10
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 25279 2 -     25548 T-T
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 I 4
s Ursus_maritimus.KK498671.1                              6512924 2 +  28682327 t-t
i Ursus_maritimus.KK498671.1                            C 0 I 9
s Varecia_rubra.k141_432109                                  3545 2 -     20643 T-C
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             23087 2 -     33872 T-C
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1523389 2 -   2331223 a-t
i Vicugna_pacos.KN269600.1                              C 0 I 10
s Vulpes_lagopus.VulLag_flattened_line_2045                135861 2 -    281493 T-C
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 I 9
s Xerus_inauris.XerIna_scaffold_7898                       125305 2 -    134049 T-C
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        212387 2 -    227762 T-T
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 I 9
s Zapus_hudsonius.ZapHud_scaffold_64392                     13549 2 -     20485 T-C
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           5661 2 -      8775 A-T
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 I 10
e Sorex_araneus.JH798170.1                               17748817 583 -  27805282 I
e Chrysochloris_asiatica.ChrAsi_scaffold_141308              8820 2035 -     12508 T
e Microgale_talazaci.MicTal_scaffold_34660                  30023 1 -     48017 I
e Mesoplodon_bidens.MesBid_scaffold_183284                   2166 255 +      2166 T
e Echinops_telfairi.JH980316.1                           22993597 1 -  44670279 I
e Crocidura_indochinensis.CroInd_scaffold_38409             18407 2 -     19186 I
e Rhinopithecus_bieti.k119_102124                           13902 26 -     14454 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65667885 0 +  89412551 C
e Nycticebus_coucang.k141_2051882                            2265 0 +      6470 C
e Nycticebus_bengalensis.LG16                            65565537 0 -  95554990 C
e Nannospalax_galili.KL201303.1                            108737 0 +    362372 C
e Macaca_tonkeana.k141_2870633                               2864 158 -     27140 T
e Macaca_nigra.k141_282495                                   2859 158 -     46448 T
e Macaca_maura.k141_251854                                  43912 158 -     79256 T

a score=0.000000
s hg38.chr4_GL000008v2_random                               10030 3 +    209709 A-A-T
s Acinonyx_jubatus.LLWD01000356.1                         2032101 3 +   3721120 g-A-T
i Acinonyx_jubatus.LLWD01000356.1                       I 9 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    110776 3 -    189883 A-A-A
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10655448 3 +  23371972 a-a-t
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 9 C 0
s Ailurus_fulgens.LNAC01000003.1                          7092373 3 -  16596857 a-a-t
i Ailurus_fulgens.LNAC01000003.1                        I 9 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   11087 3 -     22067 A-A-A
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_3103707                  61043 3 +     61638 A-A-T
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        52855 3 +     53391 A-A-T
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         3580 3 +     72529 A-A-T
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          3155 3 +      3797 A-A-T
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             8301 3 -     18050 A-A-T
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  9414 3 -     11521 A-A-T
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              8978 3 -     21359 A-A-T
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_298055                                  269 3 +      1823 A-A-T
i Alouatta_juara.k141_298055                            C 0 C 0
s Alouatta_macconnelli.k141_1331706                          8269 3 -     10438 A-A-T
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            4925 3 +      7047 A-A-T
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             8211 3 +     10410 A-A-T
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            2014 3 -      4927 A-A-T
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             4944 3 +      6429 A-A-T
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3518892 3 +   4113121 A-A-T
i Ammotragus_lervia.NIVO01013474.1                      I 9 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      389037 3 -    631301 A-C-T
i Anoura_caudifer.AnoCau_scaffold_422                   I 9 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            29473 3 +     33004 A-G-T
i Antilocapra_americana.AntAmePen_scaffold_42841        I 9 C 0
s Aotus_azarae.k141_3170768                                 60667 3 +     78111 A-A-T
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            3608 3 +     22701 A-A-T
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5747565 3 +   9889416 a-a-t
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             4150 3 -    104377 A-A-T
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               4156 3 +     23246 A-A-T
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     2174 3 +      5067 A-A-A
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      16111 3 +     17483 A-A-C
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 7434 3 -     29036 A-C-T
i Artibeus_jamaicensis.ArtJam_scaffold_41619            I 9 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9537400 3 +  39197703 A-A-T
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             58684 3 +     85812 A-A-T
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 9683 3 +     89302 A-A-T
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             14188 3 -     58268 A-A-T
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             62179 3 +    119057 A-A-T
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               4148 3 -     25888 A-A-T
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 4920 3 -     16375 A-A-T
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              1239 3 +      2719 A-A-T
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26378893 3 +  51448160 A-A-T
i Balaenoptera_acutorostrata.KI537095.1                 I 10 C 0
s Balaenoptera_bonaerensis.DF502048.1                        4125 3 -     13118 A-A-T
i Balaenoptera_bonaerensis.DF502048.1                   I 10 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   41954 3 -     72089 A-A-T
i Beatragus_hunteri.BeaHun_scaffold_21644               I 9 C 0
s Bison_bison.KN264915.1                                  6557985 3 +   6870073 A-A-T
i Bison_bison.KN264915.1                                I 9 C 0
s Bos_indicus.CM003021.1                                138138224 3 - 161108492 A-A-T
i Bos_indicus.CM003021.1                                I 9 C 0
s Bos_mutus.JH883513.1                                     570598 3 -    998990 A-A-T
i Bos_mutus.JH883513.1                                  I 9 C 0
s Bos_taurus.CM000177.6                                 136293957 3 - 158972876 A-A-T
i Bos_taurus.CM000177.6                                 I 9 C 0
s Bubalus_bubalis.KI419065.1                              1229712 3 -   1914593 A-A-T
i Bubalus_bubalis.KI419065.1                            I 9 C 0
s Cacajao_ayresi.k141_724503                               112040 3 -    171031 A-A-T
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 11066 3 +    125063 A-A-T
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                13114 3 -    216513 A-A-T
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        5654 3 -    134917 A-A-T
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3218292 3 -   8989139 a-a-t
i Camelus_bactrianus.KN276303.1                         I 10 C 0
s Camelus_dromedarius.KN271192.1                           395997 3 -  15254737 a-a-C
i Camelus_dromedarius.KN271192.1                        I 10 C 0
s Camelus_ferus.KB016973.1                                2971730 3 +   6889770 a-a-t
i Camelus_ferus.KB016973.1                              I 10 C 0
s CanFam4.chr31                                          11516826 3 +  39901454 G-A-T
i CanFam4.chr31                                         I 9 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   11844 3 +     87036 G-A-T
i Canis_lupus_VD.CanFam_VD_scaffold_16982               I 9 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11263487 3 -  35597290 G-A-T
i Canis_lupus_dingo.QKWQ01001993.1                      I 9 C 0
s Canis_lupus_familiaris.chr31                           11086016 3 +  39895921 G-A-T
i Canis_lupus_familiaris.chr31                          I 9 C 0
s Canis_lupus_orion.HG994411.1                           16453040 3 -  44759192 G-A-T
i Canis_lupus_orion.HG994411.1                          I 9 C 0
s Capra_aegagrus.CM003214.1                              21323968 3 + 157394656 A-A-T
i Capra_aegagrus.CM003214.1                             I 9 C 0
s Capra_hircus.CM004562.1                               135705195 3 - 157403528 A-A-T
i Capra_hircus.CM004562.1                               I 9 C 0
s Capromys_pilorides.CapPil_scaffold_979108                   274 3 -      1248 A-A-C
i Capromys_pilorides.CapPil_scaffold_979108             C 0 C 0
s Carlito_syrichta.NW_007248099.1                          307278 3 +    345090 A-A-T
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               58231 3 +     67245 A-C-T
i Carollia_perspicillata.CarPer_scaffold_4436           I 9 C 0
s Castor_canadensis.CasCan_scaffold_47037                   28723 3 +     33760 A-A-T
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   157500 3 -    276539 A-A-T
i Catagonus_wagneri.CatWag_scaffold_1305                I 11 C 0
s Cavia_aperea.AVPZ01000278.1                            15784880 3 -  24422027 t-a-t
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15796814 3 -  24440124 t-a-t
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       175005 3 +    436027 T-A-T
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18888898 3 -  29618158 A-A-T
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 6442 3 -     26817 A-A-T
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                10682 3 +     25043 A-A-T
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         6311 3 +     21754 A-A-T
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4362609 3 +   7569818 a-a-t
i Ceratotherium_simum.JH767818.1                        I 9 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         2361 3 -      9338 A-A-T
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    I 9 C 0
s Cercocebus_atys.KQ010443.1                              6552839 3 +   6739814 A-A-T
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      54316 3 -     54931 A-A-T
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         19300 3 -     19697 A-A-T
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         56831 3 -    107033 A-A-T
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        3271 3 -      3853 A-A-T
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          27202 3 +     30494 A-A-T
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           3231 3 -      4022 A-A-T
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          3120 3 -      3505 A-A-T
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           21908 3 +     35983 A-A-T
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11988445 3 +  12117833 A-A-T
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46475198 3 +  46592721 A-A-T
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      33027 3 +     33420 A-A-T
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        3061 3 -      3443 A-A-T
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      4059 3 -      4669 A-A-T
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        3847 3 -      4411 A-A-T
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         3382 3 -      4205 A-A-T
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_2711798           398 3 -       616 A-A-T
i Chaetophractus_vellerosus.ChaVel_scaffold_2711798     I 4 C 0
s Cheirogaleus_major.k141_1157592                           57224 3 -     68416 A-A-T
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            6266 3 +     13308 A-A-T
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             3702 3 -     18223 A-A-T
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             20725 3 +     25473 A-A-T
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           39764 3 +     57117 A-A-T
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          44439 3 +     54541 A-A-T
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15960037 3 +  43084221 a-a-C
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         69262 3 +    196370 A-G-T
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          13442 3 +     40510 A-G-T
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15136666 3 -  15256731 A-A-C
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      31712 3 -     53260 A-A-C
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101142161 3 + 101219884 A-A-T
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                15189 3 -     21363 A-A-T
i Choloepus_didactylus.ChoDid_scaffold_36182            I 4 C 0
s Choloepus_hoffmanni.KN194586.1                           760500 3 +    964067 a-a-t
i Choloepus_hoffmanni.KN194586.1                        I 4 C 0
s Colobus_angolensis.KN985967.1                          10880729 3 +  10971483 t-t-t
i Colobus_angolensis.KN985967.1                         C 0 I 166
s Colobus_guereza.LG08                                  147661886 3 + 156195979 t-t-t
i Colobus_guereza.LG08                                  C 0 I 166
s Colobus_polykomos.k141_1406057                            13874 3 +     23629 t-t-t
i Colobus_polykomos.k141_1406057                        C 0 I 165
s Condylura_cristata.JH655880.1                          60611352 3 +  78930452 A-A-T
i Condylura_cristata.JH655880.1                         I 4 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         38343 3 -     40477 A-G-T
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     I 9 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 276672 3 -    399297 A-A-A
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53027296 3 +  72327488 a-a-a
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             18409 3 -     19186 A-C-T
i Crocidura_indochinensis.CroInd_scaffold_38409         I 2 I 6
s Cryptoprocta_ferox.CryFer_flattened_line_19014            50116 3 -     70449 G-A-T
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 9 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  206449 3 -    956709 G-A-G
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 28995 3 -     67205 A-G-T
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                16039 3 +     26546 A-A-T
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             57141 3 -    236241 A-A-T
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          180942 3 -   6883506 A-A-T
i Dasypus_novemcinctus.JH568778.1                       I 4 C 0
s Daubentonia_madagascariensis.ctg11                     16843081 3 +  31942871 A-A-T
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80035574 3 -  96802777 A-A-T
i Delphinapterus_leucas.KZ290064.1                      I 10 C 0
s Desmodus_rotundus.KZ672188.1                           18697541 3 -  18957592 a-c-t
i Desmodus_rotundus.KZ672188.1                          I 9 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 321256 3 +    993696 a-a-t
i Dicerorhinus_sumatrensis.PEKH010003161.1              I 9 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   1908 3 +    151128 A-A-T
i Diceros_bicornis.DicBicMic_scaffold_9545              I 9 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   155929 3 +    228994 A-A-T
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3653643 3 +   4240102 A-A-A
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 25207 4 +     28912 A-AAA
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                34392 3 -     73477 A-A-T
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22993598 3 -  44670279 a-a-T
i Echinops_telfairi.JH980316.1                          I 1 C 0
s Eidolon_helvum.KE772537.1                                 10920 3 +     24177 a-g-t
i Eidolon_helvum.KE772537.1                             I 9 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1490241 3 +   1727528 A-A-T
i Elaphurus_davidianus.JRFZ01086400.1                   I 9 C 0
s Elephantulus_edwardii.JH947210.1                        7805476 3 +  15467074 t-a-t
i Elephantulus_edwardii.JH947210.1                      I 4 C 0
s Ellobius_lutescens.LOEQ01003611.1                        237951 3 -    369425 A-A-A
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           4967 3 -      7838 A-A-A
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85869901 3 +  99434291 a-a-t
i Enhydra_lutris.KZ291749.1                             I 9 C 0
s Eptesicus_fuscus.JH977687.1                             4702494 3 +   6522550 A-G-T
i Eptesicus_fuscus.JH977687.1                           I 9 C 0
s Equus_asinus.JREZ01000062.1                             5851682 3 -   7175178 g-a-t
i Equus_asinus.JREZ01000062.1                           I 9 C 0
s Equus_caballus.CM000402.2                              13350185 3 +  41866177 g-a-t
i Equus_caballus.CM000402.2                             I 9 C 0
s Equus_przewalskii.ATBW01073585.1                          11675 3 +     92910 g-a-t
i Equus_przewalskii.ATBW01073585.1                      I 9 C 0
s Erinaceus_europaeus.JH835290.1                         11531230 3 +  16010500 a-a-t
i Erinaceus_europaeus.JH835290.1                        I 4 C 0
s Erythrocebus_patas.Contig8                             48768844 3 -  48907691 A-A-T
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          313778 3 +    330699 A-A-T
i Eschrichtius_robustus.EscRob_flattened_line_685       I 10 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             60232 3 +     89355 A-A-T
i Eubalaena_japonica.EubJap_flattened_line_7756         I 10 C 0
s Eulemur_albifrons.k141_715837                              3271 3 +     13586 A-A-T
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               3206 3 -      6809 A-A-T
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             9681 3 +     36558 A-A-T
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             5997 3 +     60246 A-A-T
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 9479 3 +    109717 A-A-T
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               13859 3 +     16540 A-A-T
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                14134 3 +     27497 A-A-T
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           16595 3 +     26808 A-A-T
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                31324 3 +     46535 A-A-T
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              14047 3 -     29447 A-A-T
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129891077 3 - 159252932 g-A-T
i Felis_catus.CM001386.2                                I 9 C 0
s Felis_catus_fca126.CM031420.1                         129278149 3 - 158578461 g-A-T
i Felis_catus_fca126.CM031420.1                         I 9 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 19284 3 +     52776 G-A-T
i Felis_nigripes.FelNig_flattened_line_8080             I 9 C 0
s Fukomys_damarensis.KN123630.1                          13890987 3 -  19261668 a-a-t
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     209179 3 -    847004 A-A-T
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           11558 3 -     43889 A-A-T
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           8626 3 +     27357 A-A-T
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               154539 3 +    324696 A-A-T
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    180041 3 -    189561 A-A-T
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 9 C 0
s Glis_glis.GliGli_scaffold_79770                           10941 3 -     18683 A-A-G
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               3428 3 -     14630 A-A-T
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119650527 3 - 195582420 A-A-T
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   75678 3 +    118900 G-A-T
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                         3831 3 +      3980 A-A-T
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             26307 3 +     26611 A-A-T
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             3767 3 +     56096 A-A-T
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        27044 3 -     42470 A-A-T
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        43638 3 -     54384 A-A-T
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              15324 3 +     53719 G-A-T
i Helogale_parvula.HelPar_flattened_line_22962          I 9 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                26239 3 -     91191 A-A-T
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 8 C 0
s Heterocephalus_glaber.JH602058.1                        2549375 3 +  31725842 A-A-T
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               55796 3 +     73687 A-A-T
i Heterohyrax_brucei.HetBruBak_scaffold_25354           I 4 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              145809 3 +    277961 A-A-T
i Hippopotamus_amphibius.HipAmp_scaffold_1308           I 10 C 0
s Hipposideros_armiger.JXIK01001085.1                      277125 3 -    477199 A-G-T
i Hipposideros_armiger.JXIK01001085.1                   I 9 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              6284 3 -      9143 A-G-T
i Hipposideros_galeritus.HipGal_scaffold_104691         I 9 C 0
s Hoolock_leuconedys.ctg79                                      2675 3 -   7690867 A-A-T
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 14419 3 -     67322 G-A-T
i Hyaena_hyaena.HyaHya_flattened_line_20729             I 9 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           17301 3 -    119109 A-A-T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              3240 3 +      5897 A-A-T
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_1485652                              1660 3 -      1697 A-A-T
i Hylobates_agilis.k141_1485652                         C 0 C 0
s Hylobates_klossii.k141_466549                              9684 3 +     11537 A-A-T
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14622785 3 -  25970782 A-A-T
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                              41 3 -      2977 A-A-T
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             32172 3 -     60944 A-A-T
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     4427 3 +     22540 A-A-T
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7124300 3 +  13083262 A-A-A
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_1884019                                   1512 3 -      2196 A-A-T
i Indri_indri.k141_1884019                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               7562 3 +     17520 A-A-T
i Inia_geoffrensis.IniGeo_flattened_line_66725          I 10 C 0
s Jaculus_jaculus.JH725517.1                              8563841 3 +  11848649 a-a-a
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               22392 3 +     37189 A-A-T
i Kogia_breviceps.KogBre_flattened_line_35920           I 10 C 0
s Lagothrix_lagothricha.k141_12968                          48269 3 -    147782 A-A-T
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   112290 3 -    115756 A-G-T
i Lasiurus_borealis.LasBor_scaffold_5102                I 9 C 0
s Lemur_catta.scaffold_1                                258405327 3 - 285822530 A-A-T
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        22196 3 +     39228 A-A-T
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            51571 3 +     63517 A-A-T
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        76815 3 +    116806 A-A-T
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     29835 3 -     33031 A-A-T
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3084118 3 -   3498232 a-a-t
i Leptonychotes_weddellii.KB714749.1                    I 9 C 0
s Lepus_americanus.LepAme_scaffold_62849                    11291 3 +     22452 A-A-T
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            134727 3 +   3060487 A-A-T
i Lipotes_vexillifer.KE558548.1                         I 10 C 0
s Lophocebus_aterrimus.ctg55                             19245927 3 +  19376315 A-A-T
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            8922 3 +     84689 A-A-T
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3776673 3 +   6799190 A-A-T
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20590444 3 -  62548349 A-A-T
i Loxodonta_africana.GL010040.1                         I 4 C 0
s Lycaon_pictus.CM007556.1                               11085472 3 +  39895028 G-A-T
i Lycaon_pictus.CM007556.1                              I 9 C 0
s Macaca_arctoides.k141_2201161                             17603 3 +     74745 A-A-T
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12704113 3 +  12821369 A-A-T
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               6209 3 +      6569 A-A-T
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           44511 3 +     63263 A-A-T
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_925451                                  519 3 +     10231 A-A-T
i Macaca_fuscata.k119_925451                            C 0 C 0
s Macaca_leonina.k141_3421209                                2660 3 +      3017 A-A-T
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_mulatta.NC_041755.1                            196033190 3 + 196197964 A-A-T
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11443296 3 +  11645122 A-A-T
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_radiata.k141_1580474                                3052 3 -      3617 A-A-T
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 13382 3 -     55006 A-A-T
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43838419 3 +  43892939 A-A-T
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                5641 3 -      5978 A-A-T
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                700335 3 +    802869 A-G-T
i Macroglossus_sobrinus.MacSob_scaffold_879             I 9 C 0
s Mandrillus_leucophaeus.scaffold125                     43435089 3 -  43563597 A-A-T
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4447915 3 -   4543643 A-A-T
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            144829 3 +    252755 G-A-G
i Manis_javanica.JSZB01003966.1                         I 10 C 0
s Manis_pentadactyla.KN017078.1                             34904 3 +     58827 G-A-G
i Manis_pentadactyla.KN017078.1                         I 10 C 0
s Marmota_marmota.CZRN01000005.1                         36872135 3 +  64221397 A-A-A
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       62990 3 -    234502 A-G-T
i Megaderma_lyra.MegLyr_scaffold_3562                   I 9 C 0
s Mellivora_capensis.MelCap_flattened_line_146202             711 3 -      1999 A-A-T
i Mellivora_capensis.MelCap_flattened_line_146202       I 9 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               10230 3 +     15977 A-A-A
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1045035 3 -  26018355 A-A-A
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Microcebus_murinus.CM007691.1                          16508441 3 +  47401472 c-A-T
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  30024 3 -     48017 A-A-T
i Microgale_talazaci.MicTal_scaffold_34660              I 1 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               21416 3 -     32043 A-C-T
i Micronycteris_hirsuta.MicHir_scaffold_37978           I 9 C 0
s Microtus_ochrogaster.CM001673.1                        22818154 3 -  98408828 A-A-A
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8208164 3 +  10048721 A-C-T
i Miniopterus_natalensis.LDJU01000022.1                 I 9 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            32836 3 +     45743 A-C-T
i Miniopterus_schreibersii.MinSch_scaffold_24116        I 9 C 0
s Miopithecus_ogouensis.k141_2666161                        33744 3 +     34273 A-A-T
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         9626 3 -    104932 A-A-T
i Mirounga_angustirostris.MirAng_flattened_line_8852    I 9 C 0
s Mirza_zaza.k141_226143                                     3839 3 +      8497 A-A-T
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 145162 3 +    154973 A-A-T
i Monodon_monoceros.MonMon_M_scaffold_5598              I 10 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                159922 3 +    265003 A-C-T
i Mormoops_blainvillei.MorMeg_scaffold_2952             I 9 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 3343 3 -      4346 A-A-T
i Moschus_moschiferus.MosMos_scaffold_146101            I 9 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  143015 3 -    168139 G-A-T
i Mungos_mungo.MunMun_flattened_line_8729               I 9 C 0
s Murina_feae.MurFea_scaffold_2254                          17801 3 -    100666 A-G-T
i Murina_feae.MurFea_scaffold_2254                      I 9 C 0
s Mus_caroli.LT608236.1                                  70764639 3 +  92629107 a-a-a
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75487679 3 +  98207768 a-a-a
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67553869 3 +  89017189 a-a-a
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74328860 3 +  97876770 a-a-a
i Mus_spretus.CM004110.1                                C 0 I 2
s Muscardinus_avellanarius.MusAve_scaffold_9643              9419 3 +     98495 G-A-T
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4422283 3 -  28371801 a-a-t
i Mustela_putorius.JH417978.1                           I 9 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     88340 3 -    117718 A-A-C
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               966126 3 +   8389877 A-G-T
i Myotis_brandtii.KE161952.1                            I 9 C 0
s Myotis_davidii.KB114863.1                               5017815 3 +   6462685 A-G-T
i Myotis_davidii.KB114863.1                             I 9 C 0
s Myotis_lucifugus.GL429887.1                             3463712 3 -   3747815 A-G-T
i Myotis_lucifugus.GL429887.1                           I 9 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         8906 3 +     66751 A-G-T
i Myotis_myotis.MyoMyo_scaffold_6123                    I 9 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3789 3 -      8794 A-A-T
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        I 4 C 0
s Nasalis_larvatus.k141_153429                               6119 3 +     48152 A-A-T
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4483018 3 -  14209539 a-a-t
i Neomonachus_schauinslandi.NINY01007774.1              I 9 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3949775 3 -   4490290 A-A-T
i Neophocaena_asiaeorientalis.KZ688543.1                I 10 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  48029 3 +     94413 A-A-T
i Noctilio_leporinus.NocLep_scaffold_12062              I 9 C 0
s Nomascus_annamensis.k141_302224                              89 3 +      1516 A-A-T
i Nomascus_annamensis.k141_302224                       C 0 C 0
s Nomascus_concolor.k141_49591                               1210 3 +      2014 A-A-T
i Nomascus_concolor.k141_49591                          C 0 C 0
s Nomascus_gabriellae.k141_642452                             135 3 +      2851 A-A-T
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             23014 3 -  18771707 A-A-T
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                   763 3 +      4512 A-A-T
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                28465 3 +   3668941 G-A-T
i Nyctereutes_procyonoides.CAJHUB010000786.1            I 9 C 0
s Ochotona_princeps.JH802095.1                            4994268 3 -  23139505 A-G-T
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3683837 3 +  10294119 A-A-T
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             677663 3 -   3126709 a-a-t
i Odobenus_rosmarus.KB229369.1                          I 9 C 0
s Odocoileus_virginianus.KZ101650.1                       1078471 3 +   1425656 A-A-T
i Odocoileus_virginianus.KZ101650.1                     I 9 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         35766 3 +     78940 A-A-T
i Okapia_johnstoni.LVCL01S0017931.1                     I 9 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  123422 3 +    145789 A-A-A
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  35184 3 +     62360 A-A-A
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7223459 3 -   7562323 A-A-T
i Orcinus_orca.KB316965.1                               I 10 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              42382 3 -     66828 A-A-T
i Orycteropus_afer.OryAfe_flattened_line_13509          I 4 C 0
s Oryctolagus_cuniculus.CM000803.1                      141873953 3 + 163896628 a-a-t
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      305803 3 -    505867 G-A-T
i Otocyon_megalotis.JAEUCK010005121.1                   I 9 C 0
s Otolemur_crassicaudatus.k141_321880                       37269 3 +     38679 A-A-T
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18006711 3 -  38779656 a-G-T
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134076033 3 - 275406953 A-A-T
i Ovis_aries.CM001582.2                                 I 9 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      77247 3 +    140051 A-A-T
i Ovis_canadensis.OviCan_scaffold_6251                  I 9 C 0
s Pan_paniscus.CM003386.1                               127572772 3 - 205426864 A-A-T
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120149925 3 - 196562556 A-A-T
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  32479 3 +    295523 G-A-T
i Panthera_onca.PanOnc_flattened_line_1615              I 9 C 0
s Panthera_pardus.KV860323.1                              3636213 3 +  18214204 g-A-T
i Panthera_pardus.KV860323.1                            I 9 C 0
s Panthera_tigris.KE721879.1                              5025860 3 -   6340057 g-A-T
i Panthera_tigris.KE721879.1                            I 9 C 0
s Pantholops_hodgsonii.KE114631.1                         1064894 3 -   1292953 A-A-T
i Pantholops_hodgsonii.KE114631.1                       I 9 C 0
s Papio_anubis.CM001492.2                               188153871 3 - 188283584 A-A-T
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            50083 3 +     76494 A-A-T
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47511268 3 +  47705337 A-A-T
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 65245 3 -    104429 A-A-T
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  15036 3 -     29451 A-A-T
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                35439 3 +     35859 A-A-T
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113799 3 -    135482 G-A-T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 I 33 C 0
s Perodicticus_ibeanus.k141_117958                           3312 3 -     23713 A-A-T
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            22610 3 -     27972 A-A-T
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      41219 4 -     45160 AAA-T
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4948366 3 -   8017169 a-a-a
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    10531 3 -     36578 A-A-T
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            120076 3 -    122454 A-A-T
i Phocoena_phocoena.PhoPho_flattened_line_11948         I 10 C 0
s Piliocolobus_badius.k141_1497351                           3114 3 -      3310 T-T-T
i Piliocolobus_badius.k141_1497351                      C 0 I 181
s Piliocolobus_gordonorum.k141_902470                       23019 3 -     82327 T-T-T
i Piliocolobus_gordonorum.k141_902470                   C 0 T 512
s Piliocolobus_kirkii.k141_557609                           19766 3 +     19957 t-t-t
i Piliocolobus_kirkii.k141_557609                       C 0 I 187
s Piliocolobus_tephrosceles.PDMG02000036.1               26737780 3 +  26888534 t-t-t
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 I 178
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            95570 3 +    112873 A-G-T
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        I 10 C 0
s Pithecia_albicans.k141_991845                             41754 3 -     61926 A-A-T
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        23183 3 +     78826 A-A-T
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              7134 3 -     15800 A-A-T
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        10332 3 -     16101 A-A-T
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          3641 3 +      9673 A-A-T
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13472635 3 -  19735023 A-A-T
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           11543 3 -     31692 A-A-T
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           4142 3 +     21690 A-A-T
i Platanista_gangetica.PlaMin_flattened_line_72990      I 10 C 0
s Plecturocebus_bernhardi.k141_959214                       20979 3 +     44506 A-A-T
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        21189 3 +     67491 A-A-T
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      11430 3 -     98129 A-A-T
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     21035 3 +    147771 A-A-T
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        21284 3 -     23762 A-A-T
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          1751 3 -     55515 A-A-T
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         21104 3 +    152463 A-A-T
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      7864 3 +      8943 A-A-T
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                         10824 3 +    134592 A-A-T
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          21414 3 -     75465 A-A-T
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              185316 3 -    373494 A-A-T
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19805224 3 +  19899266 A-A-T
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               3363 3 -     15069 A-A-T
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              3497 3 +     14865 A-A-T
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                75667 3 +     78963 A-A-T
i Procavia_capensis.ProCapCap_scaffold_15315            I 4 C 0
s Prolemur_simus.MPIZ01000048.1                           6846703 3 +  12164890 a-A-T
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    666016 3 -   2312742 a-A-T
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         1846 3 +     11805 A-A-T
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           41181 3 +     52369 A-A-T
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         33570 3 -     44753 A-A-T
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            15491 3 +     27322 A-A-T
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       15130 3 -     53241 A-A-T
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         37401 3 -     48185 A-A-T
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           31770 3 +     77221 a-a-A
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            2590 3 -     27784 a-c-t
i Pteronotus_parnellii.KE867983.1                       I 8 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        244377 3 -    344369 A-A-T
i Pteronura_brasiliensis.PteBra_flattened_line_1343     I 9 C 0
s Pteropus_alecto.KB031157.1                             13244721 3 -  17261082 a-g-t
i Pteropus_alecto.KB031157.1                            I 9 C 0
s Pteropus_vampyrus.KN525959.1                             602671 3 -   3946241 a-g-t
i Pteropus_vampyrus.KN525959.1                          I 9 C 0
s Puma_concolor.QAVW01000427.1                          131532442 3 - 161321710 g-A-T
i Puma_concolor.QAVW01000427.1                          I 9 C 0
s Pygathrix_cinerea.k141_374971                             27488 3 +     56732 A-A-T
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6803979 3 +   6970761 A-A-T
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             3373 3 +     18040 A-A-T
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                14548 3 +     68503 A-A-T
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 9 C 0
s Rattus_norvegicus.chr11                                13913732 3 +  90463843 a-a-a
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1786531 3 +   2252614 A-G-T
i Rhinolophus_sinicus.LVEH01000179.1                    I 9 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206375251 3 - 206558726 A-A-T
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44854151 3 -  45163003 A-A-T
i Rhinopithecus_strykeri.ctg4                           C 0 T 1252
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                18011 3 +    109198 A-G-T
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            I 9 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       6350 3 +     12214 A-A-T
i Saiga_tatarica.SaiTat_scaffold_82192                  I 9 C 0
s Saimiri_boliviensis.NW_024100938.1                     15670853 3 -  43202129 a-a-t
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        2719 3 +     34089 A-A-T
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              2660 3 -     60842 A-A-T
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              2755 3 +     67014 A-A-T
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              2733 3 +     60816 A-A-T
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 2670 3 -     76454 A-A-T
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17339426 3 -  30362882 A-A-T
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         18801 3 -     62485 A-A-T
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   30098 3 -    114521 A-A-C
i Scalopus_aquaticus.ScaAqu_scaffold_9300               I 4 C 0
s Semnopithecus_entellus.k141_1527475                       25915 3 +     26421 A-A-T
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       6375 3 +     20762 A-A-T
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         40110 3 +     40653 A-A-T
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                           10667 3 -     12194 A-A-T
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     24089 3 -     27512 A-A-T
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         33104 3 -     33692 A-A-T
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   97959 3 -    120886 A-G-A
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            16719 3 +    739146 A-A-T
i Solenodon_paradoxus.SolPar_flattened_line_1012        I 4 C 0
s Spermophilus_dauricus.KZ294190.1                        2238217 3 +   2842873 A-A-A
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             233128 3 -    276980 A-A-T
i Spilogale_gracilis.SpiGra_flattened_line_905          I 9 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            25681 3 +     62062 G-A-T
i Suricata_suricatta.SurSur_flattened_line_20339        I 9 C 0
s Sus_scrofa.CM000824.4                                 189270597 3 + 218635234 a-a-t
i Sus_scrofa.CM000824.4                                 I 11 C 0
s Symphalangus_syndactylus.tarseq_24                        13042 3 -  13920577 A-A-T
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               4517 3 -      6213 G-C-T
i Tadarida_brasiliensis.TadBra_scaffold_145589          I 9 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               13464 3 +     45698 A-A-T
i Tamandua_tetradactyla.TamTet_scaffold_26877           I 4 C 0
s Tapirus_indicus.TapInd_scaffold_176                      805461 3 +   1148477 G-A-T
i Tapirus_indicus.TapInd_scaffold_176                   I 9 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  56121 3 +     99546 G-A-T
i Tapirus_terrestris.TapTer_scaffold_14939              I 9 C 0
s Tarsius_lariang.k141_609102                               24761 3 +     42269 A-A-T
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               58077 3 +     65473 A-A-T
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194005407 3 - 194193292 A-A-T
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             37592 3 -     47444 A-A-T
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  2886 3 +      6782 A-A-T
i Tolypeutes_matacus.TolMat_scaffold_269431             I 4 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  134600 3 -    259118 A-C-T
i Tonatia_saurophila.TonSau_scaffold_3334               I 9 C 0
s Trachypithecus_auratus.k141_738098                        24485 3 +     38948 A-A-T
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   18212 3 -     32910 A-A-T
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       24110 3 +     24652 A-A-T
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      2988 3 -      3559 A-A-T
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           40932 3 -     54611 A-A-T
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       16933 3 +     17312 A-A-T
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    24296 3 -     25040 A-A-T
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          2957 3 +      3528 A-A-T
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  49324 3 +     51589 A-A-T
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       12500 3 +     14732 A-A-T
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       2977 3 -     28054 A-A-T
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44657772 3 -  44834318 A-A-T
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        2781 3 +      3372 A-A-T
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   3935 3 +     90398 A-A-A
i Tragulus_javanicus.TraJav_scaffold_14717              I 9 C 0
s Trichechus_manatus.JH594618.1                          16080894 3 +  31416278 A-A-T
i Trichechus_manatus.JH594618.1                         I 4 C 0
s Tupaia_chinensis.KB320831.1                             2790669 3 -   3938065 A-A-T
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    3192 3 +     13056 A-A-T
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69312176 3 -  96451834 A-A-T
i Tursiops_truncatus.MRVK01000923.1                     I 10 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 25285 3 -     25548 A-A-T
i Uropsilus_gracilis.UroGra_scaffold_4143_0             I 4 C 0
s Ursus_maritimus.KK498671.1                              6512935 3 +  28682327 a-a-t
i Ursus_maritimus.KK498671.1                            I 9 C 0
s Varecia_rubra.k141_432109                                  3547 3 -     20643 A-A-T
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             23089 3 -     33872 A-A-T
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1523401 3 -   2331223 a-a-t
i Vicugna_pacos.KN269600.1                              I 10 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                135872 3 -    281493 G-A-T
i Vulpes_lagopus.VulLag_flattened_line_2045             I 9 C 0
s Xerus_inauris.XerIna_scaffold_7898                       125307 3 -    134049 A-G-A
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        212398 3 -    227762 A-A-T
i Zalophus_californianus.ZalCal_flattened_line_4097     I 9 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     13551 3 -     20485 A-A-A
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           5673 3 -      8775 A-A-T
i Ziphius_cavirostris.ZipCav_flattened_line_127025      I 10 C 0
e Sorex_araneus.JH798170.1                               17748817 583 -  27805282 I
e Chrysochloris_asiatica.ChrAsi_scaffold_141308              8820 2035 -     12508 T
e Mesoplodon_bidens.MesBid_scaffold_183284                   2166 255 +      2166 T
e Rhinopithecus_bieti.k119_102124                           13902 26 -     14454 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65667885 0 +  89412551 C
e Nycticebus_coucang.k141_2051882                            2265 0 +      6470 C
e Nycticebus_bengalensis.LG16                            65565537 0 -  95554990 C
e Nannospalax_galili.KL201303.1                            108737 0 +    362372 C
e Macaca_tonkeana.k141_2870633                               2864 158 -     27140 T
e Macaca_nigra.k141_282495                                   2859 158 -     46448 T
e Macaca_maura.k141_251854                                  43912 158 -     79256 T

a score=0.000000
s hg38.chr4_GL000008v2_random                               10033 4 +    209709 A------T-AT
s Acinonyx_jubatus.LLWD01000356.1                         2032104 4 +   3721120 A------T-GC
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    110779 4 -    189883 A------T-AC
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10655451 4 +  23371972 a------t-aC
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7092376 4 -  16596857 a------t-ac
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   11090 4 -     22067 A------T-AT
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_3103707                  61046 4 +     61638 A------T-AT
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        52858 4 +     53391 A------T-GT
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         3583 4 +     72529 A------T-GT
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          3158 4 +      3797 A------T-GT
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             8304 4 -     18050 A------T-AT
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  9417 4 -     11521 A------T-AT
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              8981 4 -     21359 A------T-AT
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_298055                                  272 4 +      1823 A------T-AT
i Alouatta_juara.k141_298055                            C 0 C 0
s Alouatta_macconnelli.k141_1331706                          8272 4 -     10438 A------T-AT
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            4928 4 +      7047 A------T-AT
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             8214 4 +     10410 A------T-AT
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            2017 4 -      4927 A------T-AT
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             4947 4 +      6429 A------T-AC
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3518895 4 +   4113121 A------T-AC
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      389040 4 -    631301 A------T-AC
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            29476 4 +     33004 A------T-AC
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 60670 4 +     78111 A------T-AT
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            3611 4 +     22701 A------T-AT
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5747568 4 +   9889416 a------t-at
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             4153 4 -    104377 A------T-AT
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               4159 4 +     23246 A------T-AT
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     2177 4 +      5067 A------G-GT
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      16114 4 +     17483 G------T-AC
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 7437 4 -     29036 A------T-AC
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9537403 4 +  39197703 A------T-AT
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             58687 4 +     85812 A------T-AT
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 9686 4 +     89302 A------T-AT
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             14191 4 -     58268 A------T-AT
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             62182 4 +    119057 A------T-GT
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               4151 4 -     25888 A------T-AT
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 4923 4 -     16375 A------A-AC
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              1242 4 +      2719 A------A-AC
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26378896 4 +  51448160 A------C-AC
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        4128 4 -     13118 A------C-AC
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   41957 4 -     72089 A------T-AC
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6557988 4 +   6870073 A------T-AC
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138138227 4 - 161108492 A------T-AC
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     570601 4 -    998990 A------T-AC
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136293960 4 - 158972876 A------T-AC
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1229715 4 -   1914593 A------T-AC
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               112043 4 -    171031 A------T-AT
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 11069 4 +    125063 A------T-AT
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                13117 4 -    216513 A------T-AT
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        5657 4 -    134917 A------T-AT
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3218295 4 -   8989139 A------T-AC
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           396000 4 -  15254737 A------T-AC
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2971733 4 +   6889770 A------T-AC
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11516829 4 +  39901454 A------T-AC
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   11847 4 +     87036 A------T-AC
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11263490 4 -  35597290 A------T-AC
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11086019 4 +  39895921 A------T-AC
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16453043 4 -  44759192 A------T-AC
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21323971 4 + 157394656 A------T-AC
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135705198 4 - 157403528 A------T-AC
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_979108                   277 4 -      1248 A------A-AC
i Capromys_pilorides.CapPil_scaffold_979108             C 0 C 0
s Carlito_syrichta.NW_007248099.1                          307281 4 +    345090 A------T-GT
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               58234 4 +     67245 A------T-AT
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   28726 4 +     33760 G------T-TT
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   157503 4 -    276539 A------T-AT
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15784883 4 -  24422027 a------a-ac
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15796817 4 -  24440124 a------a-ac
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       175008 4 +    436027 A------A-AC
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18888901 4 -  29618158 A------T-AT
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 6445 4 -     26817 A------T-AT
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                10685 4 +     25043 A------T-AT
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         6314 4 +     21754 A------T-GT
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4362612 4 +   7569818 a------t-gc
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         2364 4 -      9338 A------T-GC
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6552842 4 +   6739814 A------T-AT
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      54319 4 -     54931 A------T-AT
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         19303 4 -     19697 A------T-AT
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         56834 4 -    107033 A------T-AT
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        3274 4 -      3853 A------T-AT
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          27205 4 +     30494 A------T-AT
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           3234 4 -      4022 A------T-AT
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          3123 4 -      3505 A------T-AT
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           21911 4 +     35983 A------T-AT
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11988448 4 +  12117833 A------T-AT
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46475201 4 +  46592721 A------T-AT
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      33030 4 +     33420 A------T-AT
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        3064 4 -      3443 A------T-AT
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      4062 4 -      4669 A------T-CT
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        3850 4 -      4411 A------T-AT
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         3385 4 -      4205 A------T-AT
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_2711798           401 4 -       616 A------T-AG
i Chaetophractus_vellerosus.ChaVel_scaffold_2711798     C 0 C 0
s Cheirogaleus_major.k141_1157592                           57227 4 -     68416 A------A-AC
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            6269 4 +     13308 A------A-AC
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             3705 4 -     18223 A------T-AT
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             20728 4 +     25473 A------T-AT
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           39767 4 +     57117 A------T-AT
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          44442 4 +     54541 A------T-AT
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15960040 4 +  43084221 A------A-AC
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         69265 1 +    196370 A----------
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          13445 1 +     40510 A----------
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15136669 4 -  15256731 A------T-AT
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      31715 4 -     53260 A------T-AT
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101142164 4 + 101219884 A------T-AT
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                15192 4 -     21363 A------T-AG
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           760503 4 +    964067 a------t-ag
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10880898 4 +  10971483 N------N-NN
i Colobus_angolensis.KN985967.1                         I 166 I 148
s Colobus_guereza.LG08                                  147662055 4 + 156195979 g------t-ga
i Colobus_guereza.LG08                                  I 166 I 148
s Colobus_polykomos.k141_1406057                            14042 4 +     23629 c------t-cg
i Colobus_polykomos.k141_1406057                        I 165 I 151
s Condylura_cristata.JH655880.1                          60611355 4 +  78930452 A------C-AC
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         38346 4 -     40477 A------T-GC
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 276675 4 -    399297 A------C-AC
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53027299 4 +  72327488 a------c-ac
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             18418 3 -     19186 -------T-GA
i Crocidura_indochinensis.CroInd_scaffold_38409         I 6 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            50119 4 -     70449 A------T-AC
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  206452 4 -    956709 A------T-AT
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 28998 4 -     67205 A------A-AC
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                16042 4 +     26546 A------A-AC
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             57144 4 -    236241 A------A-AC
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          180945 4 -   6883506 A------T-AG
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16843084 4 +  31942871 A------T-AT
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80035577 4 -  96802777 A------C-AC
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18697544 4 -  18957592 a------T-AC
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 321259 4 +    993696 a------t-gC
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   1911 4 +    151128 A------T-GC
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   155932 4 +    228994 A------A-AC
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3653646 4 +   4240102 A------T-AT
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 25211 4 +     28912 A------T-AT
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                34395 4 -     73477 A------A-AG
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22993601 4 -  44670279 A------T-AT
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 10923 4 +     24177 a------t-ac
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1490244 4 +   1727528 A------T-AC
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7805479 4 +  15467074 a------t-aa
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        237954 4 -    369425 A------C-AC
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           4970 4 -      7838 A------C-AC
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85869904 4 +  99434291 a------t-ac
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4702497 4 +   6522550 A------T-AG
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5851685 4 -   7175178 A------T-GC
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13350188 4 +  41866177 A------T-GC
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          11678 4 +     92910 A------T-GC
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11531233 4 +  16010500 a------a-aa
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48768847 4 -  48907691 A------T-AT
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          313781 4 +    330699 A------G-AC
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             60235 4 +     89355 A------C-AC
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              3274 4 +     13586 A------A-GC
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               3209 4 -      6809 A------A-GC
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             9684 4 +     36558 A------A-GC
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             6000 4 +     60246 A------A-AC
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 9482 4 +    109717 A------A-GC
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               13862 4 +     16540 A------A-GC
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                14137 4 +     27497 A------A-GC
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           16598 2 +     26808 A------A---
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                31327 4 +     46535 A------A-GC
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              14050 4 -     29447 A------A-GC
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129891080 4 - 159252932 A------T-GC
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129278152 4 - 158578461 A------T-GC
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 19287 4 +     52776 A------T-GC
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13890990 4 -  19261668 a------a-ac
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     209182 4 -    847004 G------T-AC
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           11561 4 -     43889 G------T-AC
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           8629 4 +     27357 G------T-AC
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               154542 4 +    324696 A------T-AT
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    180044 4 -    189561 A------T-AC
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           10944 4 -     18683 G------T-AC
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               3431 4 -     14630 A------T-AT
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119650530 4 - 195582420 A------T-AT
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   75681 4 +    118900 G------T-AC
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                         3834 4 +      3980 A------A-AC
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             26310 4 +     26611 A------A-AC
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             3770 4 +     56096 A------A-AC
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        27047 4 -     42470 A------A-AC
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        43641 4 -     54384 A------A-AC
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              15327 4 +     53719 A------T-AC
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                26242 4 -     91191 A------T-AC
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2549378 4 +  31725842 A------A-AC
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               55799 5 +     73687 A------TTAT
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              145812 4 +    277961 A------T-AC
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      277128 4 -    477199 A------T-AC
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              6287 4 -      9143 A------T-AC
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      2678 4 -   7690867 A------T-AT
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 14422 4 -     67322 A------T-AC
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           17304 4 -    119109 A------A-AC
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              3243 4 +      5897 A------T-AT
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_1485652                              1663 4 -      1697 A------T-AT
i Hylobates_agilis.k141_1485652                         C 0 C 0
s Hylobates_klossii.k141_466549                              9687 4 +     11537 A------T-AT
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14622788 4 -  25970782 A------T-AT
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                              44 4 -      2977 A------T-AT
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             32175 4 -     60944 A------T-AT
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     4430 4 +     22540 A------A-AC
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7124303 4 +  13083262 A------T-AC
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_1884019                                   1515 4 -      2196 A------A-AC
i Indri_indri.k141_1884019                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               7565 4 +     17520 A------C-AC
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8563844 4 +  11848649 g------C-AT
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               22395 4 +     37189 A------C-AC
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          48272 4 -    147782 A------T-AT
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   112293 4 -    115756 A------T-AG
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258405330 4 - 285822530 A------A-AC
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        22199 4 +     39228 A------A-AC
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            51574 4 +     63517 A------A-AC
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        76818 4 +    116806 A------A-AC
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     29838 4 -     33031 A------A-AC
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3084121 4 -   3498232 a------t-ac
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    11294 4 +     22452 C------T-CC
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            134730 4 +   3060487 A------C-AC
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19245930 4 +  19376315 A------T-AT
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            8925 4 +     84689 G------T-AC
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3776676 4 +   6799190 G------T-AC
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20590447 4 -  62548349 A------T-AC
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11085475 4 +  39895028 A------T-AC
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             17606 4 +     74745 A------T-AT
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12704116 4 +  12821369 A------T-AT
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               6212 4 +      6569 A------T-AT
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           44514 4 +     63263 A------T-AT
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_925451                                  522 4 +     10231 A------T-AT
i Macaca_fuscata.k119_925451                            C 0 C 0
s Macaca_leonina.k141_3421209                                2663 4 +      3017 A------T-AT
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_mulatta.NC_041755.1                            196033193 4 + 196197964 A------T-AT
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11443299 4 +  11645122 A------T-AT
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_radiata.k141_1580474                                3055 4 -      3617 A------T-AT
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 13385 4 -     55006 A------T-AT
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43838422 4 +  43892939 A------T-AT
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                5644 4 -      5978 A------T-AT
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                700338 4 +    802869 A------T-AC
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43435092 4 -  43563597 A------T-AT
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4447918 4 -   4543643 A------T-AT
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            144832 4 +    252755 T------T-AC
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             34907 4 +     58827 T------T-AC
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36872138 4 +  64221397 A------T-AT
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       62993 4 -    234502 A------C-GC
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_146202             714 4 -      1999 A------T-AC
i Mellivora_capensis.MelCap_flattened_line_146202       C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               10233 4 +     15977 A------T-AC
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1045038 4 -  26018355 A------T-AC
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Microcebus_murinus.CM007691.1                          16508444 4 +  47401472 A------A-AC
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  30027 4 -     48017 A------T-AA
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               21419 4 -     32043 A------T-AC
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22818157 4 -  98408828 A------T-GC
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8208167 4 +  10048721 A------T-AC
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            32839 4 +     45743 A------T-AC
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        33747 4 +     34273 A------T-AT
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         9629 4 -    104932 A------T-AC
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     3842 4 +      8497 A------A-AC
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 145165 4 +    154973 A------C-AC
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                159925 4 +    265003 A------T-AC
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 3346 4 -      4346 A------T-GC
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  143018 4 -    168139 A------T-AC
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          17804 4 -    100666 A------G-AG
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70764642 9 +  92629107 aaaaaaaa-a-
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75487682 5 +  98207768 aaa----a-a-
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67553872 3 +  89017189 a------t-a-
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74328865 2 +  97876770 -------a-a-
i Mus_spretus.CM004110.1                                I 2 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              9422 4 +     98495 G------A-AC
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4422286 4 -  28371801 a------t-ac
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     88343 4 -    117718 A------A-AC
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               966129 4 +   8389877 A------T-AG
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5017818 4 +   6462685 A------T-AG
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3463715 4 -   3747815 A------T-AG
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         8909 4 +     66751 A------T-AG
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3792 4 -      8794 A------C-AG
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nasalis_larvatus.k141_153429                               6122 4 +     48152 A------T-AT
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4483021 4 -  14209539 a------t-ac
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3949778 4 -   4490290 A------C-AT
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  48032 4 +     94413 A------T-GC
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_302224                              92 4 +      1516 A------T-AT
i Nomascus_annamensis.k141_302224                       C 0 C 0
s Nomascus_concolor.k141_49591                               1213 4 +      2014 A------T-AT
i Nomascus_concolor.k141_49591                          C 0 C 0
s Nomascus_gabriellae.k141_642452                             138 4 +      2851 A------T-AC
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             23017 4 -  18771707 A------T-AT
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                   766 4 +      4512 A------T-AT
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                28468 4 +   3668941 A------T-AC
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Ochotona_princeps.JH802095.1                            4994271 4 -  23139505 A------T-AG
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3683840 4 +  10294119 A------A-AC
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             677666 4 -   3126709 a------t-ac
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1078474 4 +   1425656 A------T-AC
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         35769 4 +     78940 A------T-AC
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  123425 4 +    145789 A------C-AC
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  35187 4 +     62360 A------A-GC
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7223462 4 -   7562323 A------C-AC
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              42385 4 -     66828 A------T-AC
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141873956 4 + 163896628 c------t-CC
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      305806 4 -    505867 A------T-AC
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       37272 4 +     38679 G------T-AC
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18006714 4 -  38779656 G------T-AC
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134076036 4 - 275406953 A------T-AC
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      77250 4 +    140051 A------T-AC
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127572775 4 - 205426864 A------T-AT
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120149928 4 - 196562556 A------T-AT
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  32482 4 +    295523 A------T-GC
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3636216 4 +  18214204 A------T-GC
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5025863 4 -   6340057 A------T-GC
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1064897 4 -   1292953 A------T-AC
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188153874 4 - 188283584 A------T-AT
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            50086 4 +     76494 A------T-AT
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47511271 4 +  47705337 A------T-AT
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 65248 4 -    104429 A------T-AT
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  15039 4 -     29451 A------T-AT
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                35442 4 +     35859 A------T-AT
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113802 4 -    135482 A------T-AC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           3315 4 -     23713 G------T-AC
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            22613 4 -     27972 G------T-AC
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      41223 4 -     45160 A------T-AT
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4948369 4 -   8017169 a------c-aa
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    10534 4 -     36578 A------A-TC
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            120079 4 -    122454 A------C-AC
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           3298 4 -      3310 c------t-ca
i Piliocolobus_badius.k141_1497351                      I 181 T 697
s Piliocolobus_gordonorum.k141_1270531                        116 4 -     17985 c------t-ag
i Piliocolobus_gordonorum.k141_1270531                  n 512 I 165
s Piliocolobus_kirkii.k141_557609                           19956 1 +     19957 c----------
i Piliocolobus_kirkii.k141_557609                       I 187 T 700
s Piliocolobus_tephrosceles.PDMG02000036.1               26737961 4 +  26888534 c------t-ag
i Piliocolobus_tephrosceles.PDMG02000036.1              I 178 I 165
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            95573 4 +    112873 A------G-AG
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             41757 4 -     61926 A------T-AT
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        23186 4 +     78826 A------T-AT
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              7137 4 -     15800 A------T-AT
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        10335 4 -     16101 A------T-AT
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          3644 4 +      9673 A------T-AT
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13472638 4 -  19735023 A------T-AT
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           11546 4 -     31692 A------T-AT
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           4145 4 +     21690 A------C-AC
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       20982 4 +     44506 A------T-AT
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        21192 4 +     67491 A------T-AT
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      11433 4 -     98129 A------T-AT
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     21038 4 +    147771 A------T-AT
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        21287 4 -     23762 A------T-AT
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          1754 4 -     55515 A------T-AT
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         21107 4 +    152463 A------T-AT
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      7867 4 +      8943 A------T-AT
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                         10827 4 +    134592 A------T-AT
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          21417 4 -     75465 A------T-AT
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              185319 4 -    373494 A------T-AT
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19805227 4 +  19899266 A------T-AT
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               3366 4 -     15069 A------T-AT
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              3500 4 +     14865 A------T-AT
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                75670 5 +     78963 A------TTAT
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6846706 4 +  12164890 A------A-AC
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    666019 4 -   2312742 A------A-AC
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         1849 4 +     11805 A------A-AC
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           41184 4 +     52369 A------A-AC
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         33573 4 -     44753 A------A-AC
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            15494 4 +     27322 A------A-AC
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       15133 4 -     53241 A------A-AC
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         37404 4 -     48185 A------A-AC
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           31773 4 +     77221 A------T-AC
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            2593 4 -     27784 a------T-AC
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        244380 4 -    344369 A------T-AC
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13244724 4 -  17261082 a------t-at
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             602674 4 -   3946241 a------t-at
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131532445 4 - 161321710 A------T-GC
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             27491 4 +     56732 A------T-AT
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6803982 4 +   6970761 A------T-AT
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             3376 4 +     18040 A------T-AT
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                14551 4 +     68503 A------T-AC
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13913735 3 +  90463843 C------T-A-
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1786534 4 +   2252614 A------T-AC
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           13928 4 -     14454 A------T-AT
i Rhinopithecus_bieti.k119_102124                       I 26 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206375254 4 - 206558726 A------T-AT
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44852902 4 -  45163003 A------T-AT
i Rhinopithecus_strykeri.ctg4                           T 1252 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                18014 4 +    109198 A------T-AG
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       6353 4 +     12214 A------T-AC
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15670856 4 -  43202129 a------t-at
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        2722 4 +     34089 A------T-AT
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              2663 4 -     60842 A------T-AT
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              2758 4 +     67014 A------T-AT
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              2736 4 +     60816 A------T-AT
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 2673 4 -     76454 A------T-AT
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17339429 4 -  30362882 A------T-AT
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         18804 4 -     62485 A------T-AT
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   30101 4 -    114521 A------T-AC
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1527475                       25918 4 +     26421 A------T-AT
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       6378 4 +     20762 A------T-AT
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         40113 4 +     40653 A------T-AT
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                           10670 4 -     12194 A------T-AT
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     24092 4 -     27512 A------T-AT
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         33107 4 -     33692 A------T-AT
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   97962 4 -    120886 A------C-AC
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            16722 4 +    739146 A------T-AC
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2238220 4 +   2842873 A------T-AC
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             233131 4 -    276980 A------T-AC
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            25684 4 +     62062 A------T-CC
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189270600 4 + 218635234 a------t-AC
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        13045 4 -  13920577 A------T-AT
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               4520 4 -      6213 G------T-AC
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               13467 4 +     45698 A------C-AG
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      805464 4 +   1148477 A------T-GC
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  56124 4 +     99546 A------T-GC
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               24764 4 +     42269 A------T-GT
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               58080 4 +     65473 A------T-GT
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194005410 4 - 194193292 A------T-AT
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             37595 4 -     47444 A------A-GC
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  2889 4 +      6782 A------T-AG
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  134603 4 -    259118 G------T-AT
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        24488 4 +     38948 A------T-AT
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   18215 4 -     32910 A------T-AT
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       24113 4 +     24652 A------T-AT
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      2991 4 -      3559 A------T-AT
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           40935 4 -     54611 A------T-AT
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       16936 4 +     17312 A------T-AT
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    24299 4 -     25040 A------T-AT
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          2960 4 +      3528 A------T-AT
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  49327 4 +     51589 A------T-AT
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       12503 4 +     14732 A------T-AT
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       2980 4 -     28054 A------T-AT
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44657775 4 -  44834318 A------T-AT
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        2784 4 +      3372 A------T-AT
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   3938 4 +     90398 A------T-AC
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16080897 4 +  31416278 A------T-AC
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2790672 4 -   3938065 A------T-GC
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    3195 4 +     13056 A------T-GC
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69312179 4 -  96451834 A------C-AC
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 25288 4 -     25548 A------T-AT
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6512938 4 +  28682327 a------t-aT
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  3550 4 -     20643 A------A-AC
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             23092 4 -     33872 A------A-AC
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1523404 4 -   2331223 A------T-AC
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                135875 4 -    281493 A------T-AC
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       125310 4 -    134049 A------T-AC
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        212401 4 -    227762 A------T-AC
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     13554 4 -     20485 G------C-AT
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           5676 4 -      8775 A------C-AC
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Sorex_araneus.JH798170.1                               17748817 583 -  27805282 I
e Chrysochloris_asiatica.ChrAsi_scaffold_141308              8820 2035 -     12508 T
e Mesoplodon_bidens.MesBid_scaffold_183284                   2166 255 +      2166 T
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65667885 0 +  89412551 C
e Nycticebus_coucang.k141_2051882                            2265 0 +      6470 C
e Nycticebus_bengalensis.LG16                            65565537 0 -  95554990 C
e Nannospalax_galili.KL201303.1                            108737 0 +    362372 C
e Macaca_tonkeana.k141_2870633                               2864 158 -     27140 T
e Macaca_nigra.k141_282495                                   2859 158 -     46448 T
e Macaca_maura.k141_251854                                  43912 158 -     79256 T

a score=0.000000
s hg38.chr4_GL000008v2_random                               10037 6 +    209709 ATGTAA
s Acinonyx_jubatus.LLWD01000356.1                         2032108 6 +   3721120 CAGCAA
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    110783 6 -    189883 AAGGAA
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10655455 6 +  23371972 CAGTGA
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7092380 6 -  16596857 taACAA
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   11094 6 -     22067 aagcaa
i Allactaga_bullata.AllBul_scaffold_70162               C 0 I 127
s Allenopithecus_nigroviridis.k141_3103707                  61050 6 +     61638 AAGTAA
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        52862 6 +     53391 ATGTAA
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         3587 6 +     72529 ATGTAA
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          3162 6 +      3797 ATGTAA
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             8308 6 -     18050 ATGTAA
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  9421 6 -     11521 ATGTAA
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              8985 6 -     21359 ATGTAA
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_298055                                  276 6 +      1823 ATGTAA
i Alouatta_juara.k141_298055                            C 0 C 0
s Alouatta_macconnelli.k141_1331706                          8276 6 -     10438 ATGTAA
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            4932 6 +      7047 ATGTAA
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             8218 6 +     10410 ATGTAA
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            2021 6 -      4927 ATGTAA
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             4951 6 +      6429 ATGTAA
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3518899 5 +   4113121 CAGCA-
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      389044 6 -    631301 CAGCAA
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            29480 5 +     33004 CAGCA-
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 60674 6 +     78111 ATGTAA
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            3615 6 +     22701 ATGTAA
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5747572 6 +   9889416 atgtaa
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             4157 6 -    104377 ATGTAA
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               4163 6 +     23246 ATGTAA
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     2181 6 +      5067 ATGCCA
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      16118 3 +     17483 AAG---
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 7441 6 -     29036 CAGCAA
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9537407 6 +  39197703 ACGTAA
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             58691 6 +     85812 ACGTAA
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 9690 6 +     89302 ACGTAA
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             14195 6 -     58268 ACGTAA
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             62186 6 +    119057 ACGTAA
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               4155 6 -     25888 ATGTAA
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 4927 6 -     16375 AAGCAA
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              1246 6 +      2719 AAGCAA
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26378900 6 +  51448160 CAGCAA
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        4132 6 -     13118 CAGCAA
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   41961 5 -     72089 CAGCA-
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6557992 5 +   6870073 CACCA-
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138138231 5 - 161108492 CACCA-
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     570605 5 -    998990 CACCA-
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136293964 5 - 158972876 CACCA-
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1229719 5 -   1914593 CACCA-
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               112047 6 -    171031 ATGTAA
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 11073 6 +    125063 ATGTAA
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                13121 6 -    216513 ATGTAA
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        5661 6 -    134917 ATGTAA
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3218299 6 -   8989139 CAGCAA
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           396004 6 -  15254737 CAGCAA
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2971737 6 +   6889770 CAGCAA
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11516833 6 +  39901454 CTGCAA
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   11851 6 +     87036 CTGCAA
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11263494 6 -  35597290 CTGCaa
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11086023 6 +  39895921 CTGCaa
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16453047 6 -  44759192 CTGCaa
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21323975 5 + 157394656 CAGCA-
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135705202 5 - 157403528 CAGCA-
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_979108                   281 6 -      1248 AAGCAA
i Capromys_pilorides.CapPil_scaffold_979108             C 0 C 0
s Carlito_syrichta.NW_007248099.1                          307285 6 +    345090 AAGCAA
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               58238 6 +     67245 CAGCAA
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   28730 6 +     33760 AAATAA
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   157507 6 -    276539 TGGCAA
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15784887 6 -  24422027 gATAAA
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15796821 6 -  24440124 aataaa
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       175012 6 +    436027 AATAAA
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18888905 6 -  29618158 ATGTAA
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 6449 6 -     26817 ATGTAA
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                10689 6 +     25043 ATGTAA
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         6318 6 +     21754 AAGCAA
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4362616 2 +   7569818 CG----
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         2368 2 -      9338 CG----
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6552846 6 +   6739814 ATGTAA
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      54323 6 -     54931 ATGTAA
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         19307 6 -     19697 ATGTAA
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         56838 6 -    107033 ATGTAA
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        3278 6 -      3853 ATGTAA
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          27209 6 +     30494 ATGTAA
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           3238 6 -      4022 ATGTAA
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          3127 6 -      3505 ATGTAA
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           21915 6 +     35983 ATGTAA
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11988452 6 +  12117833 ATGTAA
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46475205 6 +  46592721 ATGTAA
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      33034 6 +     33420 ATGTAA
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        3068 6 -      3443 ATGTAA
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      4066 6 -      4669 ATGTAA
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        3854 6 -      4411 ATGTAA
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         3389 6 -      4205 ATGTAA
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_2711798           405 6 -       616 CAGCAA
i Chaetophractus_vellerosus.ChaVel_scaffold_2711798     C 0 C 0
s Cheirogaleus_major.k141_1157592                           57231 6 -     68416 AAGCAA
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            6273 6 +     13308 AAGCAA
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             3709 6 -     18223 ATGTAA
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             20732 6 +     25473 ATGTAA
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           39771 6 +     57117 ATGTAA
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          44446 6 +     54541 ATGTAA
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15960044 6 +  43084221 AAGCAA
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chlorocebus_aethiops.ctg22                             15136673 6 -  15256731 ATGTAA
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      31719 6 -     53260 ATGTAA
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101142168 6 + 101219884 ATGTAA
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                15196 6 -     21363 CAGGAG
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           760507 6 +    964067 CAGGAG
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10881050 6 +  10971483 NNNNNN
i Colobus_angolensis.KN985967.1                         I 148 C 0
s Colobus_guereza.LG08                                  147662207 6 + 156195979 ATGTAA
i Colobus_guereza.LG08                                  I 148 C 0
s Colobus_polykomos.k141_1406057                            14197 6 +     23629 ATGTCA
i Colobus_polykomos.k141_1406057                        I 151 C 0
s Condylura_cristata.JH655880.1                          60611359 6 +  78930452 CAGCAA
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         38350 6 -     40477 CAGCTA
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 276679 6 -    399297 AGGGAA
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53027303 6 +  72327488 caaaga
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             18421 4 -     19186 CAGT--
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            50123 6 -     70449 CAACAA
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  206456 6 -    956709 AAGCAA
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 29002 6 -     67205 AAGCAA
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                16046 6 +     26546 AAGCAA
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             57148 6 -    236241 AAGCAA
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          180949 6 -   6883506 CAGCAA
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16843088 6 +  31942871 AAGCAA
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80035581 6 -  96802777 CAGCAA
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18697548 6 -  18957592 CAGCAA
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 321263 2 +    993696 CG----
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   1915 2 +    151128 CG----
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   155936 6 +    228994 AAGCAA
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3653650 6 +   4240102 AGATAG
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 25215 6 +     28912 AGATAG
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                34399 6 -     73477 AAGCAA
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22993605 6 -  44670279 CCGCAA
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 10927 6 +     24177 cagcaa
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1490248 5 +   1727528 CAGCA-
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7805483 6 +  15467074 caGCTA
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        237958 6 -    369425 TGGGAA
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           4974 6 -      7838 TGGGAA
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85869908 6 +  99434291 caACAA
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4702501 6 +   6522550 CAGCAA
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5851689 2 -   7175178 CT----
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13350192 2 +  41866177 CT----
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          11682 2 +     92910 CT----
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11531237 6 +  16010500 tagcaa
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48768851 6 -  48907691 ATGTAA
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          313785 6 +    330699 CAGCAA
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             60239 6 +     89355 CAGCAA
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              3278 6 +     13586 AAGCGA
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               3213 6 -      6809 AAGCGA
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             9688 6 +     36558 AAGTGA
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             6004 6 +     60246 AAGCGA
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 9486 6 +    109717 AAGCGA
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               13866 6 +     16540 AAGCGA
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                14141 6 +     27497 AAGCGA
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           16600 4 +     26808 --GCGA
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                31331 6 +     46535 AAGCGA
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              14054 6 -     29447 AAGCGA
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129891084 6 - 159252932 CAGCAA
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129278156 6 - 158578461 CAGCAA
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 19291 6 +     52776 CAGCAA
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13890994 6 -  19261668 aagcaa
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     209186 6 -    847004 AAGAAA
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           11565 6 -     43889 AAGAAA
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           8633 6 +     27357 AAGCAA
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               154546 6 +    324696 AAGCAA
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    180048 5 -    189561 CAGCA-
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           10948 6 -     18683 ACATAA
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               3435 6 -     14630 ATGTAA
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119650534 6 - 195582420 ATGTAA
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   75685 6 +    118900 ACATAA
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                         3838 6 +      3980 AAGCAA
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             26314 6 +     26611 AAGCAA
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             3774 6 +     56096 AAGCAA
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        27051 6 -     42470 AAGCAA
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        43645 6 -     54384 AAGCAA
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              15331 6 +     53719 CAGCAA
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                26246 5 -     91191 CAGCA-
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2549382 6 +  31725842 AAGCAA
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               55804 6 +     73687 CAGCAA
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              145816 6 +    277961 CAGCAA
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      277132 6 -    477199 CAGCAA
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              6291 6 -      9143 CAGCAA
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      2682 6 -   7690867 ATGTAA
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 14426 6 -     67322 CAGCAA
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           17308 6 -    119109 AAGCAA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              3247 6 +      5897 ATGTAA
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_1485652                              1667 6 -      1697 ATGTAA
i Hylobates_agilis.k141_1485652                         C 0 C 0
s Hylobates_klossii.k141_466549                              9691 6 +     11537 ATGTAA
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14622792 6 -  25970782 ATGTAA
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                              48 6 -      2977 ATGTAA
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             32179 6 -     60944 ATGTAA
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     4434 6 +     22540 AAGCAA
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7124307 6 +  13083262 ATGCAA
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_1884019                                   1519 6 -      2196 AAGCAA
i Indri_indri.k141_1884019                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               7569 6 +     17520 CAGCAA
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8563848 6 +  11848649 AAGCAA
i Jaculus_jaculus.JH725517.1                            C 0 I 121
s Kogia_breviceps.KogBre_flattened_line_35920               22399 6 +     37189 CAGCAA
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          48276 6 -    147782 ATGTAA
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   112297 6 -    115756 CAGCAA
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258405334 6 - 285822530 AAGCAA
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        22203 6 +     39228 AAGCAA
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            51578 6 +     63517 AAGCAA
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        76822 6 +    116806 AAGCAA
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     29842 6 -     33031 AAGCAA
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3084125 6 -   3498232 cAGCAA
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    11298 6 +     22452 AAGCCA
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            134734 6 +   3060487 CAGCAA
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19245934 6 +  19376315 ATGTAA
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            8929 6 +     84689 AAGCAA
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3776680 6 +   6799190 AAGCAA
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20590451 6 -  62548349 CCGCAA
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11085479 6 +  39895028 CTGCaa
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             17610 6 +     74745 ATGTAA
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12704120 6 +  12821369 ATGTAA
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               6216 6 +      6569 ATGTAA
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           44518 6 +     63263 ATGTAA
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_925451                                  526 6 +     10231 ATGTAA
i Macaca_fuscata.k119_925451                            C 0 C 0
s Macaca_leonina.k141_3421209                                2667 6 +      3017 ATGTAA
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_mulatta.NC_041755.1                            196033197 6 + 196197964 ATGTAA
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11443303 6 +  11645122 ATGTAA
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_radiata.k141_1580474                                3059 6 -      3617 ATGTAA
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 13389 6 -     55006 ATGTAA
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43838426 6 +  43892939 ATGTAA
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                5648 6 -      5978 ATGTAA
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                700342 6 +    802869 CAGCAA
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43435096 6 -  43563597 ATGTAA
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4447922 6 -   4543643 ATGTAA
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            144836 6 +    252755 TAGCAA
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             34911 6 +     58827 CAGCAA
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36872142 6 +  64221397 ATGCAA
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       62997 6 -    234502 CAATGA
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_146202             718 6 -      1999 CAACAA
i Mellivora_capensis.MelCap_flattened_line_146202       C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               10237 6 +     15977 AGGTAA
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1045042 6 -  26018355 CAGGGA
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Microcebus_murinus.CM007691.1                          16508448 6 +  47401472 AAGCAA
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  30031 6 -     48017 CCACCA
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               21423 6 -     32043 CAGCAA
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22818161 6 -  98408828 AGGGAA
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8208171 6 +  10048721 CAGCAA
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            32843 6 +     45743 CAGCAA
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        33751 6 +     34273 ATGTAA
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         9633 6 -    104932 CAGCAA
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     3846 6 +      8497 AAACAA
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 145169 6 +    154973 CAGCAA
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                159929 6 +    265003 CAGCAA
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 3350 5 -      4346 CAGCA-
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  143022 6 -    168139 CAGCAA
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          17808 6 -    100666 TAGCAA
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70764651 6 +  92629107 aggaaa
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75487687 6 +  98207768 aggaaa
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67553875 6 +  89017189 aggaaa
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74328867 6 +  97876770 aggaaa
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              9426 6 +     98495 ACATAA
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4422290 6 -  28371801 caacaa
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     88347 6 -    117718 AAGCAA
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               966133 6 +   8389877 TAGCAA
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5017822 6 +   6462685 TAGCAA
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3463719 6 -   3747815 TAGCAA
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         8913 6 +     66751 TAGCAA
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3796 6 -      8794 GAGCAC
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nasalis_larvatus.k141_153429                               6126 6 +     48152 ATGTAA
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4483025 6 -  14209539 cAGCAA
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3949782 6 -   4490290 CAGCAA
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  48036 6 +     94413 CAACAA
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_302224                              96 6 +      1516 ATGTAA
i Nomascus_annamensis.k141_302224                       C 0 C 0
s Nomascus_concolor.k141_49591                               1217 6 +      2014 ATGTAA
i Nomascus_concolor.k141_49591                          C 0 C 0
s Nomascus_gabriellae.k141_642452                             142 6 +      2851 ATGTAA
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             23021 6 -  18771707 ATGTAA
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                   770 6 +      4512 ATGTAA
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                28472 6 +   3668941 CTGCaa
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Ochotona_princeps.JH802095.1                            4994275 6 -  23139505 ATTCAA
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3683844 6 +  10294119 AAGCAA
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             677670 6 -   3126709 cAGTAA
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1078478 5 +   1425656 CAGCA-
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         35773 5 +     78940 CAGCA-
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  123429 6 +    145789 AGGGAA
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  35191 6 +     62360 CAGGAA
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7223466 6 -   7562323 CAGCAA
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              42389 6 -     66828 CAGCAA
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141873960 6 + 163896628 AAGCCA
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      305810 4 -    505867 CTGc--
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       37276 6 +     38679 AAGCAA
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18006718 6 -  38779656 AAGCAA
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134076040 5 - 275406953 CAGCA-
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      77254 5 +    140051 CAGCA-
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127572779 6 - 205426864 ATGTAA
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120149932 6 - 196562556 ATGTAA
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  32486 6 +    295523 CAGCAA
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3636220 6 +  18214204 CAGCAA
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5025867 6 -   6340057 CAGCAA
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1064901 5 -   1292953 CAGAA-
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188153878 6 - 188283584 ATGTAA
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            50090 6 +     76494 ATGTAA
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47511275 6 +  47705337 ATGTAA
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 65252 6 -    104429 ATGTAA
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  15043 6 -     29451 ATGTAA
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                35446 6 +     35859 ATGTAA
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113806 6 -    135482 CAGCAA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           3319 6 -     23713 AAGCAA
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            22617 6 -     27972 AAGCAA
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      41227 6 -     45160 AGCTAG
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4948373 6 -   8017169 caggaa
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    10538 2 -     36578 AA----
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            120083 6 -    122454 CAGCAA
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            95577 6 +    112873 CAGCAA
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             41761 6 -     61926 ACGTAA
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        23190 6 +     78826 ATGTAA
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              7141 6 -     15800 ATGTAA
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        10339 6 -     16101 ATGTAA
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          3648 6 +      9673 ATGTAA
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13472642 6 -  19735023 ATGTAA
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           11550 6 -     31692 ATGTAA
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           4149 6 +     21690 CAGCAA
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       20986 6 +     44506 ATGTAA
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        21196 6 +     67491 ATGTAA
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      11437 6 -     98129 ATGTAA
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     21042 6 +    147771 ATGTAA
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        21291 6 -     23762 ATGTAA
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          1758 6 -     55515 ATGTAA
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         21111 6 +    152463 ATGTAA
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      7871 6 +      8943 ATGTAA
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                         10831 6 +    134592 ATGTAA
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          21421 6 -     75465 ATGTAA
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              185323 6 -    373494 ATGTAA
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19805231 6 +  19899266 ATGTAA
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               3370 6 -     15069 ATGTAA
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              3504 6 +     14865 ATGTAA
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                75675 6 +     78963 CAGCAA
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6846710 6 +  12164890 AAGCAA
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    666023 6 -   2312742 AAGCAA
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         1853 6 +     11805 AAGCAA
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           41188 6 +     52369 AAGCAA
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         33577 6 -     44753 AAGCAA
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            15498 6 +     27322 AAGCAA
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       15137 6 -     53241 AAGCAA
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         37408 6 -     48185 AAGCAA
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           31777 6 +     77221 AGATTA
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            2597 6 -     27784 CAGCAA
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        244384 6 -    344369 CAACAA
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13244728 6 -  17261082 CAGCAA
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             602678 6 -   3946241 CAGCAA
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131532449 6 - 161321710 CAGCAA
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             27495 6 +     56732 ATGTAA
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6803986 6 +   6970761 ATGTAA
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             3380 6 +     18040 ATGTAA
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                14555 5 +     68503 CAGCA-
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13913738 6 +  90463843 AGGAAC
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1786538 6 +   2252614 CAGCAA
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           13932 6 -     14454 ACGTAA
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206375258 6 - 206558726 ACGTAA
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44852906 6 -  45163003 ACGTAA
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                18018 6 +    109198 CACCAA
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       6357 5 +     12214 CAGCA-
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15670860 6 -  43202129 atgtaa
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        2726 6 +     34089 ATGTAA
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              2667 6 -     60842 ATGTAA
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              2762 6 +     67014 ATGTAA
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              2740 6 +     60816 ATGTAA
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 2677 6 -     76454 ATGTAA
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17339433 6 -  30362882 ATGTAA
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         18808 6 -     62485 ATGTAA
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   30105 6 -    114521 CAGCAA
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1527475                       25922 6 +     26421 ATGTAA
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       6382 6 +     20762 ATGTAA
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         40117 6 +     40653 ATGTAA
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                           10674 6 -     12194 ATGTAA
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     24096 6 -     27512 ATGTAA
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         33111 6 -     33692 ATGTAA
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   97966 6 -    120886 CAGGAA
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            16726 6 +    739146 CAGGAG
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2238224 6 +   2842873 ATGCAA
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             233135 6 -    276980 TAACAA
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            25688 6 +     62062 CAGCAA
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189270604 6 + 218635234 TGGCAA
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        13049 6 -  13920577 ATGTAA
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               4524 6 -      6213 CAGCAA
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               13471 6 +     45698 GAGCAG
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      805468 2 +   1148477 TA----
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  56128 2 +     99546 TA----
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               24768 6 +     42269 AAGCAA
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               58084 6 +     65473 AAGCAA
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194005414 6 - 194193292 ATGTAA
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             37599 1 -     47444 T-----
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  2893 6 +      6782 CAGCAA
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  134607 6 -    259118 CAGTAA
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        24492 6 +     38948 ATGTAA
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   18219 6 -     32910 ATGTAA
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       24117 6 +     24652 ATGTAA
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      2995 6 -      3559 ATGTAA
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           40939 6 -     54611 ATGTAA
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       16940 6 +     17312 ATGTAA
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    24303 6 -     25040 ATGTAA
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          2964 6 +      3528 ATGTAA
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  49331 6 +     51589 ATGTAA
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       12507 6 +     14732 ATGTAA
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       2984 6 -     28054 ATGTAA
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44657779 6 -  44834318 ATGTAA
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        2788 6 +      3372 ATGTAA
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   3942 6 +     90398 CAGCAA
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16080901 6 +  31416278 CAGCAG
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2790676 6 -   3938065 AAGCAA
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    3199 6 +     13056 AAGCAA
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69312183 6 -  96451834 CAGCAA
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 25292 6 -     25548 CAGCAA
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6512942 6 +  28682327 CAGCAA
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  3554 4 -     20643 AAAC--
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             23096 4 -     33872 AAAC--
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1523408 6 -   2331223 CAGCAA
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                135879 6 -    281493 CTGCAA
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       125314 6 -    134049 ATGCAA
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        212405 6 -    227762 CAGTAA
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     13558 6 -     20485 CAGCAA
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           5680 6 -      8775 CAGCAA
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Sorex_araneus.JH798170.1                               17748817 583 -  27805282 I
e Chrysochloris_asiatica.ChrAsi_scaffold_141308              8820 2035 -     12508 T
e Mesoplodon_bidens.MesBid_scaffold_183284                   2166 255 +      2166 T
e Piliocolobus_tephrosceles.PDMG02000036.1               26737965 165 +  26888534 I
e Piliocolobus_kirkii.k141_557609                           19957 700 +     19957 T
e Piliocolobus_gordonorum.k141_1270531                        120 165 -     17985 I
e Piliocolobus_badius.k141_1497351                           3302 697 -      3310 T
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65667885 0 +  89412551 C
e Nycticebus_coucang.k141_2051882                            2265 0 +      6470 C
e Nycticebus_bengalensis.LG16                            65565537 0 -  95554990 C
e Nannospalax_galili.KL201303.1                            108737 0 +    362372 C
e Macaca_tonkeana.k141_2870633                               2864 158 -     27140 T
e Macaca_nigra.k141_282495                                   2859 158 -     46448 T
e Macaca_maura.k141_251854                                  43912 158 -     79256 T
e Chiropotes_sagulatus.k141_773804                          13446 0 +     40510 C
e Chiropotes_israelita.k141_1189915                         69266 0 +    196370 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               10043 8 +    209709 GTGGCAAG
s Acinonyx_jubatus.LLWD01000356.1                         2032114 2 +   3721120 GT------
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    110789 8 -    189883 ATAGTAAG
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10655461 2 +  23371972 GT------
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7092386 2 -  16596857 GT------
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   11227 8 -     22067 GCAAAAAG
i Allactaga_bullata.AllBul_scaffold_70162               I 127 C 0
s Allenopithecus_nigroviridis.k141_3103707                  61056 8 +     61638 GTGGCAGG
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        52868 8 +     53391 GTGGCAGG
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         3593 8 +     72529 GTGGCAGG
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          3168 8 +      3797 GTGGCAGG
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             8314 8 -     18050 GTGGCGAG
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  9427 8 -     11521 GTGGCGAG
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              8991 8 -     21359 GTGGCGAG
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_298055                                  282 8 +      1823 GTGGCGAG
i Alouatta_juara.k141_298055                            C 0 C 0
s Alouatta_macconnelli.k141_1331706                          8282 8 -     10438 GTGGCGAG
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            4938 8 +      7047 GTGGCGAG
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             8224 8 +     10410 GTGGCGAG
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            2027 8 -      4927 GTGGCGAG
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             4957 8 +      6429 GTGGCGAG
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      389050 2 -    631301 GT------
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Aotus_azarae.k141_3170768                                 60680 8 +     78111 GTGGCAAG
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            3621 8 +     22701 GTGGCAAG
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5747578 8 +   9889416 gtgGCAAG
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             4163 8 -    104377 GTGGCAAG
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               4169 8 +     23246 GTGGCAAG
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     2187 8 +      5067 TCAGCAAG
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      16121 4 +     17483 ----CAAG
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 7447 2 -     29036 CT------
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9537413 8 +  39197703 GTGGCAAG
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             58697 8 +     85812 GTGGCAAG
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 9696 8 +     89302 GTGGCAAG
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             14201 8 -     58268 GTGGCAAG
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             62192 8 +    119057 GTGGCAAG
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               4161 8 -     25888 GTGGCAAG
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 4933 8 -     16375 GTGACAAG
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              1252 8 +      2719 GTGACAAG
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26378906 2 +  51448160 GC------
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        4138 2 -     13118 GC------
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Cacajao_ayresi.k141_724503                               112053 8 -    171031 CTGGCAAG
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 11079 8 +    125063 CTGGCAAG
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                13127 8 -    216513 CTGGCAAG
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        5667 8 -    134917 CTGGCAAG
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3218305 2 -   8989139 GC------
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           396010 2 -  15254737 GC------
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2971743 2 +   6889770 GC------
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11516839 2 +  39901454 GT------
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   11857 2 +     87036 GT------
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11263500 2 -  35597290 gt------
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11086029 2 +  39895921 gt------
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16453053 2 -  44759192 gt------
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capromys_pilorides.CapPil_scaffold_979108                   287 8 -      1248 GCCATTAG
i Capromys_pilorides.CapPil_scaffold_979108             C 0 C 0
s Carlito_syrichta.NW_007248099.1                          307291 1 +    345090 -------G
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               58244 2 +     67245 GT------
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   28736 8 +     33760 ATGATAAG
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   157513 2 -    276539 GC------
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15784893 8 -  24422027 GCAGTGAG
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15796827 8 -  24440124 acagtaaG
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       175018 8 +    436027 ACAGTAAG
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18888911 8 -  29618158 GTGGCAAG
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 6455 8 -     26817 GTGGCAAG
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                10695 8 +     25043 GTGGCAAG
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         6324 1 +     21754 -------G
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4362618 2 +   7569818 AT------
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         2370 2 -      9338 AT------
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6552852 8 +   6739814 GTGGCAGG
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      54329 8 -     54931 GTGGCAGG
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         19313 8 -     19697 GTGGCAGG
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         56844 8 -    107033 GTGGCAGG
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        3284 8 -      3853 GTGGCAGG
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          27215 8 +     30494 GTGGCAGG
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           3244 8 -      4022 GTGGCAGG
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          3133 8 -      3505 GTGGCAGG
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           21921 8 +     35983 GTGGCAGG
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11988458 8 +  12117833 GTGGCAGG
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46475211 8 +  46592721 GTGGCAGG
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      33040 8 +     33420 GTGGCAGG
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        3074 8 -      3443 GTGGCAGG
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      4072 8 -      4669 GTGGCAGG
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        3860 8 -      4411 GTGGCAGG
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         3395 8 -      4205 GTGGCAGG
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_2711798           411 8 -       616 GTAGTGAC
i Chaetophractus_vellerosus.ChaVel_scaffold_2711798     C 0 n 0
s Cheirogaleus_major.k141_1157592                           57237 8 -     68416 GTGACAAG
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            6279 8 +     13308 CTGACAAG
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             3715 8 -     18223 GTGGTAAG
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             20738 8 +     25473 GTGGTAAG
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           39777 8 +     57117 GTGGTAAG
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          44452 8 +     54541 GTGGTAAG
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15960050 7 +  43084221 GC-ATAAG
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         69266 4 +    196370 ----AAAG
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          13446 4 +     40510 ----AAAG
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15136679 8 -  15256731 GTGGCAGG
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      31725 8 -     53260 GTGGCAGG
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101142174 8 + 101219884 GTGGCAGG
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                15202 8 -     21363 ATAGTGAG
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           760513 8 +    964067 ATAGTGAG
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10881056 8 +  10971483 NNNNNNNN
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147662213 8 + 156195979 GTGGCAGG
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            14203 8 +     23629 GTGGCAGG
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60611365 2 +  78930452 GT------
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         38356 2 -     40477 GT------
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 276685 8 -    399297 TCAATAAG
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53027309 8 +  72327488 cCAGGAAG
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            50129 2 -     70449 GT------
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  206462 8 -    956709 ACAATACA
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 29008 8 -     67205 GCCATAAG
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                16052 8 +     26546 GCAGTAAG
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             57154 8 -    236241 ACAGTAAG
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          180955 8 -   6883506 GTAGTGAc
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16843094 8 +  31942871 GTGGCCAG
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80035587 2 -  96802777 GC------
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18697554 2 -  18957592 GT------
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 321265 2 +    993696 AT------
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   1917 2 +    151128 AT------
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   155942 3 +    228994 G-----AG
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3653656 8 +   4240102 Tccataag
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 25221 8 +     28912 TCCATAAG
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                34405 8 -     73477 GCAGTAAG
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22993611 8 -  44670279 CTAGTAGC
i Echinops_telfairi.JH980316.1                          C 0 I 392
s Eidolon_helvum.KE772537.1                                 10933 2 +     24177 at------
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7805489 8 +  15467074 GAAGTTGT
i Elephantulus_edwardii.JH947210.1                      C 0 I 388
s Ellobius_lutescens.LOEQ01003611.1                        237964 8 -    369425 ACAATGAG
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           4980 8 -      7838 ACAATGAG
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85869914 2 +  99434291 GT------
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4702507 2 +   6522550 GT------
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5851691 2 -   7175178 GT------
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13350194 2 +  41866177 GT------
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          11684 2 +     92910 GT------
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11531243 2 +  16010500 at------
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48768857 8 -  48907691 GTGGCAGG
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          313791 2 +    330699 GC------
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             60245 2 +     89355 GC------
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              3284 8 +     13586 ATGACAAG
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               3219 8 -      6809 GTGACAAG
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             9694 8 +     36558 GTGACAAG
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             6010 8 +     60246 GTGACAAG
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 9492 8 +    109717 GTGACAAG
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               13872 8 +     16540 GTGACAAG
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                14147 8 +     27497 GTGACAAG
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           16604 8 +     26808 GTGACAAG
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                31337 8 +     46535 GTGACAAG
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              14060 8 -     29447 GTGACACG
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129891090 2 - 159252932 GT------
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129278162 2 - 158578461 GT------
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 19297 2 +     52776 GT------
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13891000 8 -  19261668 acagtaAG
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     209192 8 -    847004 GTGGCAAG
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           11571 8 -     43889 GTGGCAAG
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           8639 8 +     27357 GTGGCAAG
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               154552 8 +    324696 TTATTAAG
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           10954 8 -     18683 GCAGTAAG
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               3441 8 -     14630 GTGGCAAG
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119650540 8 - 195582420 GTGGCAAG
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   75691 8 +    118900 GCAGTAAG
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                         3844 8 +      3980 GTGACAAG
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             26320 8 +     26611 GTGACAAG
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             3780 8 +     56096 GTGACAAG
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        27057 8 -     42470 GTGACAAG
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        43651 8 -     54384 GTGACAAG
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              15337 2 +     53719 GT------
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2549388 8 +  31725842 GCATTAAA
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               55810 8 +     73687 GAAGGAGC
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 I 500
s Hippopotamus_amphibius.HipAmp_scaffold_1308              145822 2 +    277961 GC------
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      277138 2 -    477199 GT------
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              6297 2 -      9143 GT------
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      2688 8 -   7690867 GTGGCAAG
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 14432 2 -     67322 GT------
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           17314 8 -    119109 GCAGTAAG
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              3253 8 +      5897 GTGGCAAG
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_1485652                              1673 8 -      1697 GTGGCAAG
i Hylobates_agilis.k141_1485652                         C 0 C 0
s Hylobates_klossii.k141_466549                              9697 8 +     11537 GTGGCAAG
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14622798 8 -  25970782 GTGGCAAG
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                              54 8 -      2977 GTGGCAAG
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             32185 8 -     60944 GTGGCAAG
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     4440 8 +     22540 GCAGTAAG
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7124313 8 +  13083262 GCAGCAAG
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_1884019                                   1525 8 -      2196 GTGACAAA
i Indri_indri.k141_1884019                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               7575 2 +     17520 GC------
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8563975 8 +  11848649 gcaaaAAG
i Jaculus_jaculus.JH725517.1                            I 121 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               22405 2 +     37189 GC------
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          48282 8 -    147782 GTGGCAAG
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   112303 2 -    115756 GT------
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258405340 8 - 285822530 GTGACAAG
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        22209 8 +     39228 GTAACAAG
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            51584 8 +     63517 GTAACAAG
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        76828 8 +    116806 GTAACAAG
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     29848 8 -     33031 GTAACAAG
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3084131 2 -   3498232 GT------
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    11304 8 +     22452 GTAGCAAG
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            134740 2 +   3060487 GC------
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19245940 8 +  19376315 GTGGCAGG
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            8935 8 +     84689 GTGGCAAG
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3776686 8 +   6799190 GTGGCAAG
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20590457 8 -  62548349 GTAGTAGC
i Loxodonta_africana.GL010040.1                         C 0 I 393
s Lycaon_pictus.CM007556.1                               11085485 2 +  39895028 gt------
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             17616 8 +     74745 GTGGTAGG
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12704126 8 +  12821369 GTGGTAGG
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               6222 8 +      6569 GTGGTAGG
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           44524 8 +     63263 GTGGTAGG
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_925451                                  532 8 +     10231 GTGGTAGG
i Macaca_fuscata.k119_925451                            C 0 C 0
s Macaca_leonina.k141_3421209                                2673 8 +      3017 GTGGTAGG
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_mulatta.NC_041755.1                            196033203 8 + 196197964 GTGGTAGG
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11443309 8 +  11645122 GTGGTAGG
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_radiata.k141_1580474                                3065 8 -      3617 GTGGTAGG
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 13395 8 -     55006 GTGGTAGG
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43838432 8 +  43892939 GTGGTAGG
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                5654 8 -      5978 GTGGTAGG
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                700348 2 +    802869 GT------
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43435102 8 -  43563597 GTGGTAGG
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4447928 8 -   4543643 GTGGTAGG
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            144842 2 +    252755 GT------
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             34917 2 +     58827 GT------
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36872148 8 +  64221397 GCAGCAAG
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       63003 2 -    234502 GT------
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_146202             724 2 -      1999 GT------
i Mellivora_capensis.MelCap_flattened_line_146202       C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               10243 8 +     15977 ATAGTAAG
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1045048 8 -  26018355 ACAGTAAG
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Microcebus_murinus.CM007691.1                          16508454 8 +  47401472 GTGACAAG
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  30037 8 -     48017 CTAGTAGC
i Microgale_talazaci.MicTal_scaffold_34660              C 0 I 379
s Micronycteris_hirsuta.MicHir_scaffold_37978               21429 2 -     32043 GT------
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22818167 8 -  98408828 ACAATGag
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8208177 2 +  10048721 GT------
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            32849 2 +     45743 GT------
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        33757 8 +     34273 GTGGCAGG
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         9639 2 -    104932 GT------
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     3852 8 +      8497 GTGACAAG
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 145175 2 +    154973 GC------
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                159935 2 +    265003 GT------
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  143028 2 -    168139 GT------
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          17814 2 -    100666 GT------
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70764657 8 +  92629107 acagtaag
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75487693 8 +  98207768 acagaaag
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67553881 8 +  89017189 acagtAAG
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74328873 8 +  97876770 acagtaag
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              9432 4 +     98495 G----AAG
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4422296 2 -  28371801 at------
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     88353 8 -    117718 ACCATAGG
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               966139 2 +   8389877 GT------
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5017828 2 +   6462685 GT------
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3463725 2 -   3747815 GT------
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         8919 2 +     66751 GT------
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3802 8 -      8794 ATAGCAAG
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nasalis_larvatus.k141_153429                               6132 8 +     48152 GTGGCGGG
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4483031 2 -  14209539 GT------
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3949788 2 -   4490290 GC------
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  48042 2 +     94413 GT------
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_302224                             102 8 +      1516 GTGGCAAG
i Nomascus_annamensis.k141_302224                       C 0 C 0
s Nomascus_concolor.k141_49591                               1223 8 +      2014 GTGGCAAG
i Nomascus_concolor.k141_49591                          C 0 C 0
s Nomascus_gabriellae.k141_642452                             148 8 +      2851 GTGGCAAG
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             23027 8 -  18771707 GTGGCAAG
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                   776 8 +      4512 GTGGCAAG
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                28478 2 +   3668941 gt------
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Ochotona_princeps.JH802095.1                            4994281 8 -  23139505 GTAGCAAG
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3683850 8 +  10294119 GCCATAAG
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             677676 2 -   3126709 Gt------
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  123435 8 +    145789 ACAATGAG
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  35197 8 +     62360 AACGTAAG
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7223472 2 -   7562323 GC------
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              42395 8 -     66828 GTAGTGGC
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 I 773
s Oryctolagus_cuniculus.CM000803.1                      141873966 1 + 163896628 G-------
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       37282 8 +     38679 GTGGCAAG
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18006724 8 -  38779656 GTGGCAAG
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Pan_paniscus.CM003386.1                               127572785 8 - 205426864 GTGGCAAG
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120149938 8 - 196562556 GTGGCAAG
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  32492 2 +    295523 GT------
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3636226 2 +  18214204 GT------
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5025873 2 -   6340057 GT------
i Panthera_tigris.KE721879.1                            C 0 C 0
s Papio_anubis.CM001492.2                               188153884 8 - 188283584 GTGGCAGG
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            50096 8 +     76494 GTGGCAGG
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47511281 8 +  47705337 GTGGCAGG
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 65258 8 -    104429 GTGGCAGG
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  15049 8 -     29451 GTGGCAGG
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                35452 8 +     35859 GTGGCAGG
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113812 2 -    135482 GT------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           3325 8 -     23713 TTGGCAAG
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            22623 8 -     27972 TTGGCAAG
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      41233 8 -     45160 TTCATAAG
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4948379 8 -   8017169 acagtAAG
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    10540 8 -     36578 GCAGTAAA
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            120089 2 -    122454 GC------
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            95583 2 +    112873 AT------
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             41767 8 -     61926 CTGGCAAG
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        23196 8 +     78826 CTGGCAAG
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              7147 8 -     15800 CTGGCAAG
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        10345 8 -     16101 TTGGCAAG
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          3654 8 +      9673 CTGGCAAG
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13472648 8 -  19735023 CTGGCAAG
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           11556 8 -     31692 CTGGCAAG
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           4155 2 +     21690 GC------
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       20992 8 +     44506 GTGGTAAG
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        21202 8 +     67491 GTGGTAAG
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      11443 8 -     98129 GTGGTAAG
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     21048 8 +    147771 GTGGTAAG
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        21297 8 -     23762 GTGGTAAG
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          1764 8 -     55515 GTGGTAAG
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         21117 8 +    152463 GTGGTAAG
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      7877 8 +      8943 GTGGTAAG
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                         10837 8 +    134592 GTGGTAAG
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          21427 8 -     75465 GTGGTAAG
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              185329 8 -    373494 GTGGCAAG
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19805237 8 +  19899266 GTGGCAAG
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               3376 8 -     15069 GTGGCAGG
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              3510 8 +     14865 GTGGCAGG
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                75681 8 +     78963 GAAGGAGC
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 I 493
s Prolemur_simus.MPIZ01000048.1                           6846716 8 +  12164890 GTGACAAG
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    666029 8 -   2312742 GTGACAAG
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         1859 8 +     11805 GTGACAAG
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           41194 8 +     52369 GTGACAAG
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         33583 8 -     44753 GTGACAAG
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            15504 8 +     27322 GTGACAAG
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       15143 8 -     53241 GTGACAAG
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         37414 8 -     48185 GTGACAAG
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           31783 8 +     77221 ATAgtaag
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            2603 2 -     27784 GT------
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        244390 2 -    344369 GT------
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13244734 2 -  17261082 GT------
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             602684 2 -   3946241 GT------
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131532455 2 - 161321710 GT------
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             27501 8 +     56732 GTGGCAGG
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6803992 8 +   6970761 GTGGCAGG
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             3386 8 +     18040 GTGGCAGG
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rattus_norvegicus.chr11                                13913744 8 +  90463843 ACAGTAGG
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1786544 2 +   2252614 GT------
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           13938 8 -     14454 GTGGCAGG
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206375264 8 - 206558726 GTGGCAGG
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44852912 8 -  45163003 GTGGCAGG
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                18024 2 +    109198 GT------
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15670866 8 -  43202129 gtggCAAG
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        2732 8 +     34089 GTGGCAAG
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              2673 8 -     60842 GTGGCAAG
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              2768 8 +     67014 GTGGCAAG
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              2746 8 +     60816 GTGGCAAG
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 2683 8 -     76454 GTGGCAAG
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17339439 8 -  30362882 GTGGCAAG
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         18814 8 -     62485 GTGGCAAG
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   30111 2 -    114521 GT------
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1527475                       25928 8 +     26421 GTGGCAGG
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       6388 8 +     20762 GTGGCAGG
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         40123 8 +     40653 GTGGCAGG
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                           10680 8 -     12194 GTGGCAGG
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     24102 8 -     27512 GTGGCAGG
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         33117 8 -     33692 GTGGCAGG
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   97972 8 -    120886 ACAGTAAG
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            16732 2 +    739146 GT------
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2238230 8 +   2842873 GCAGCAAG
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             233141 2 -    276980 GT------
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            25694 2 +     62062 GT------
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189270610 2 + 218635234 GC------
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        13055 8 -  13920577 GTGGCAAG
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               4530 2 -      6213 GT------
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               13477 8 +     45698 ATAGCAAG
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tarsius_lariang.k141_609102                               24774 1 +     42269 -------G
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               58090 1 +     65473 -------G
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      805470 2 +   1148477 GT------
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  56130 2 +     99546 GT------
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194005420 8 - 194193292 GTGGCAGG
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             37600 6 -     47444 --AGTAAA
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  2899 8 +      6782 GTAGTGAC
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  134613 2 -    259118 GT------
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        24498 8 +     38948 GTGGCAGG
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   18225 8 -     32910 GTGGCAGG
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       24123 8 +     24652 GTGGCAGG
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      3001 8 -      3559 GTGGCACG
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           40945 8 -     54611 GTGGCAGG
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       16946 8 +     17312 GTGGCAGG
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    24309 8 -     25040 GTGGCAGG
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          2970 8 +      3528 GTGGCAGG
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  49337 8 +     51589 GTGGCACG
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       12513 8 +     14732 GTGGCAGG
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       2990 8 -     28054 GTGGCAGG
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44657785 8 -  44834318 GTGGCAGG
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        2794 8 +      3372 GTGGCAGG
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   3948 2 +     90398 GC------
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16080907 8 +  31416278 GTAGTAGC
i Trichechus_manatus.JH594618.1                         C 0 I 405
s Tupaia_chinensis.KB320831.1                             2790682 8 -   3938065 GTACCAAG
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    3205 8 +     13056 GTACCAGG
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69312189 2 -  96451834 GC------
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 25298 2 -     25548 GT------
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6512948 2 +  28682327 GT------
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  3558 6 -     20643 --GACAAG
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             23100 6 -     33872 --GACAAG
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1523414 2 -   2331223 GC------
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                135885 2 -    281493 GT------
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       125320 8 -    134049 GCAGCAAG
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        212411 2 -    227762 GT------
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     13564 8 -     20485 GCAGAAAG
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           5686 2 -      8775 GC------
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Sorex_araneus.JH798170.1                               17748817 583 -  27805282 I
e Chrysochloris_asiatica.ChrAsi_scaffold_141308              8820 2035 -     12508 T
e Saiga_tatarica.SaiTat_scaffold_82192                       6362 0 +     12214 C
e Rangifer_tarandus.RanTarSib_scaffold_24239                14560 0 +     68503 C
e Pantholops_hodgsonii.KE114631.1                         1064906 0 -   1292953 C
e Ovis_canadensis.OviCan_scaffold_6251                      77259 0 +    140051 C
e Ovis_aries.CM001582.2                                 134076045 0 - 275406953 C
e Otocyon_megalotis.JAEUCK010005121.1                      305814 0 -    505867 C
e Okapia_johnstoni.LVCL01S0017931.1                         35778 0 +     78940 C
e Odocoileus_virginianus.KZ101650.1                       1078483 0 +   1425656 C
e Moschus_moschiferus.MosMos_scaffold_146101                 3355 0 -      4346 C
e Mesoplodon_bidens.MesBid_scaffold_183284                   2166 255 +      2166 T
e Hemitragus_hylocrius.HemHyl_scaffold_16669                26251 0 -     91191 C
e Giraffa_tippelskirchi.LVKQ01S012154.1                    180053 0 -    189561 C
e Elaphurus_davidianus.JRFZ01086400.1                     1490253 0 +   1727528 C
e Crocidura_indochinensis.CroInd_scaffold_38409             18425 0 -     19186 C
e Capra_hircus.CM004562.1                               135705207 0 - 157403528 C
e Capra_aegagrus.CM003214.1                              21323980 0 + 157394656 C
e Bubalus_bubalis.KI419065.1                              1229724 0 -   1914593 C
e Bos_taurus.CM000177.6                                 136293969 0 - 158972876 C
e Bos_mutus.JH883513.1                                     570610 0 -    998990 C
e Bos_indicus.CM003021.1                                138138236 0 - 161108492 C
e Bison_bison.KN264915.1                                  6557997 0 +   6870073 C
e Beatragus_hunteri.BeaHun_scaffold_21644                   41966 0 -     72089 C
e Antilocapra_americana.AntAmePen_scaffold_42841            29485 0 +     33004 C
e Ammotragus_lervia.NIVO01013474.1                        3518904 0 +   4113121 C
e Piliocolobus_tephrosceles.PDMG02000036.1               26737965 165 +  26888534 I
e Piliocolobus_kirkii.k141_557609                           19957 700 +     19957 T
e Piliocolobus_gordonorum.k141_1270531                        120 165 -     17985 I
e Piliocolobus_badius.k141_1497351                           3302 697 -      3310 T
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65667885 0 +  89412551 C
e Nycticebus_coucang.k141_2051882                            2265 0 +      6470 C
e Nycticebus_bengalensis.LG16                            65565537 0 -  95554990 C
e Nannospalax_galili.KL201303.1                            108737 0 +    362372 C
e Macaca_tonkeana.k141_2870633                               2864 158 -     27140 T
e Macaca_nigra.k141_282495                                   2859 158 -     46448 T
e Macaca_maura.k141_251854                                  43912 158 -     79256 T

a score=0.000000
s hg38.chr4_GL000008v2_random                               10051 4 +    209709 TAAA
s Acinonyx_jubatus.LLWD01000356.1                         2032116 3 +   3721120 -AAG
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    110797 1 -    189883 T---
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 I 3
s Ailuropoda_melanoleuca.LNAT01000321.1                  10655463 3 +  23371972 -TAA
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7092388 3 -  16596857 -AAA
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   11235 4 -     22067 TAAA
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_3103707                  61064 4 +     61638 TAAA
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        52876 4 +     53391 TAAA
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         3601 4 +     72529 TAAA
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          3176 4 +      3797 TAAA
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             8322 4 -     18050 TAAA
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  9435 4 -     11521 TAAA
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              8999 4 -     21359 TAAA
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_298055                                  290 4 +      1823 TAAA
i Alouatta_juara.k141_298055                            C 0 C 0
s Alouatta_macconnelli.k141_1331706                          8290 4 -     10438 TAAA
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            4946 4 +      7047 TAAA
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             8232 4 +     10410 TAAA
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            2035 4 -      4927 TAAA
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             4965 4 +      6429 TAAA
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      389052 3 -    631301 -AAA
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 I 2
s Aotus_azarae.k141_3170768                                 60688 4 +     78111 TAAA
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            3629 4 +     22701 TAAA
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5747586 4 +   9889416 TAAA
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             4171 4 -    104377 TAAA
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               4177 4 +     23246 TAAA
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     2195 4 +      5067 CGAA
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      16125 4 +     17483 TAAA
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 7449 3 -     29036 -AAA
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 I 2
s Ateles_geoffroyi_b.tarseq_2582                             9537421 4 +  39197703 TAAA
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             58705 4 +     85812 TAAA
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 9704 4 +     89302 TAAA
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             14209 4 -     58268 TAAA
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             62200 4 +    119057 TAAA
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               4169 4 -     25888 TAAA
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 4941 4 -     16375 TAAA
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              1260 4 +      2719 TAAA
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26378908 3 +  51448160 -AAA
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        4140 3 -     13118 -AAA
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Cacajao_ayresi.k141_724503                               112061 4 -    171031 TAAA
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 11087 4 +    125063 TAAA
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                13135 4 -    216513 TAAA
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        5675 4 -    134917 TAAA
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3218307 3 -   8989139 -AAA
i Camelus_bactrianus.KN276303.1                         C 0 I 2
s Camelus_dromedarius.KN271192.1                           396012 3 -  15254737 -AAA
i Camelus_dromedarius.KN271192.1                        C 0 I 2
s Camelus_ferus.KB016973.1                                2971745 3 +   6889770 -AAA
i Camelus_ferus.KB016973.1                              C 0 I 2
s CanFam4.chr31                                          11516841 2 +  39901454 -AA-
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   11859 2 +     87036 -AA-
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11263502 2 -  35597290 -aa-
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11086031 2 +  39895921 -aa-
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16453055 2 -  44759192 -aa-
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capromys_pilorides.CapPil_scaffold_979108                   295 4 -      1248 GAAA
i Capromys_pilorides.CapPil_scaffold_979108             C 0 C 0
s Carlito_syrichta.NW_007248099.1                          307292 4 +    345090 TAAA
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               58246 3 +     67245 -AAA
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 I 2
s Castor_canadensis.CasCan_scaffold_47037                   28744 4 +     33760 TAAA
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   157515 3 -    276539 -AAA
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15784901 4 -  24422027 GAAA
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15796835 4 -  24440124 GAAA
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       175026 4 +    436027 GAAA
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18888919 4 -  29618158 TAAA
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 6463 4 -     26817 TAAA
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                10703 4 +     25043 TAAA
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         6325 4 +     21754 TAAA
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4362620 3 +   7569818 -AAA
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         2372 3 -      9338 -AAA
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6552860 4 +   6739814 TAAA
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      54337 4 -     54931 TAAA
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         19321 4 -     19697 TAAA
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         56852 4 -    107033 TAAA
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        3292 4 -      3853 TAAA
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          27223 4 +     30494 TAAA
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           3252 4 -      4022 TAAA
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          3141 4 -      3505 TAAA
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           21929 4 +     35983 TAAA
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11988466 4 +  12117833 TAAA
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46475219 4 +  46592721 TAAA
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      33048 4 +     33420 TAAA
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        3082 4 -      3443 TAAA
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      4080 4 -      4669 TAAA
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        3868 4 -      4411 TAAA
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         3403 4 -      4205 TAAA
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_4103795             2 4 -       420 TAAA
i Chaetophractus_vellerosus.ChaVel_scaffold_4103795     n 0 C 0
s Cheirogaleus_major.k141_1157592                           57245 4 -     68416 CAAA
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            6287 4 +     13308 CAAA
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             3723 4 -     18223 TAAA
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             20746 4 +     25473 TAAA
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           39785 4 +     57117 TAAA
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          44460 4 +     54541 TAAA
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15960057 4 +  43084221 GAAA
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         69270 4 +    196370 TAAA
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          13450 4 +     40510 CAAA
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15136687 4 -  15256731 TAAA
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      31733 4 -     53260 TAAA
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101142182 4 + 101219884 TAAA
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                15210 4 -     21363 TAAA
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           760521 4 +    964067 TAAA
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10881064 4 +  10971483 NNNN
i Colobus_angolensis.KN985967.1                         C 0 I 6404
s Colobus_guereza.LG08                                  147662221 4 + 156195979 TGAA
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            14211 4 +     23629 TGAA
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60611367 3 +  78930452 -AAA
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         38358 3 -     40477 -ACA
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 I 2
s Cricetomys_gambianus.CriGam_scaffold_949                 276693 1 -    399297 T---
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53027317 1 +  72327488 C---
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             18425 3 -     19186 -AAG
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            50131 3 -     70449 -AAG
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  206470 3 -    956709 TAA-
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 29016 4 -     67205 GAAA
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                16060 4 +     26546 GAAA
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             57162 4 -    236241 GAAA
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          180963 4 -   6883506 taaa
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16843102 4 +  31942871 CAAA
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80035589 3 -  96802777 -AAA
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18697556 3 -  18957592 -AAA
i Desmodus_rotundus.KZ672188.1                          C 0 I 2
s Dicerorhinus_sumatrensis.PEKH010003161.1                 321267 3 +    993696 -AAA
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   1919 3 +    151128 -AAA
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   155945 4 +    228994 GGAA
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3653664 4 +   4240102 taaa
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 25229 4 +     28912 TAAA
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                34413 4 -     73477 GAAA
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22994011 4 -  44670279 TAAA
i Echinops_telfairi.JH980316.1                          I 392 C 0
s Eidolon_helvum.KE772537.1                                 10935 3 +     24177 -aaa
i Eidolon_helvum.KE772537.1                             C 0 I 2
s Elephantulus_edwardii.JH947210.1                        7805885 4 +  15467074 taaa
i Elephantulus_edwardii.JH947210.1                      I 388 C 0
s Ellobius_lutescens.LOEQ01003611.1                        237972 1 -    369425 C---
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           4988 1 -      7838 C---
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85869916 3 +  99434291 -AAA
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4702509 3 +   6522550 -AAA
i Eptesicus_fuscus.JH977687.1                           C 0 I 2
s Equus_asinus.JREZ01000062.1                             5851693 3 -   7175178 -AAA
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13350196 3 +  41866177 -AAA
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          11686 3 +     92910 -AAA
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11531245 3 +  16010500 -aaG
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48768865 4 -  48907691 TAAA
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          313793 3 +    330699 -AAA
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             60247 3 +     89355 -AAA
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              3292 4 +     13586 TAAA
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               3227 4 -      6809 TAAA
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             9702 4 +     36558 TAAA
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             6018 4 +     60246 TAAA
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 9500 4 +    109717 TAAA
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               13880 4 +     16540 TAAA
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                14155 4 +     27497 TAAA
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           16612 4 +     26808 TAAA
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                31345 4 +     46535 TAAA
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              14068 4 -     29447 TAAA
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129891092 3 - 159252932 -AAG
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129278164 3 - 158578461 -AAG
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 19299 3 +     52776 -AAG
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13891008 4 -  19261668 GAAA
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     209200 4 -    847004 GAAA
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           11579 4 -     43889 GAAA
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           8647 4 +     27357 GAAA
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               154560 4 +    324696 TAAA
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           10962 4 -     18683 TAAA
i Glis_glis.GliGli_scaffold_79770                       C 0 I 3
s Gorilla_beringei.k141_111300                               3449 4 -     14630 TAAA
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119650548 4 - 195582420 TAAA
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   75699 4 +    118900 TAAA
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 I 3
s Hapalemur_alaotrensis.k141_1198205                         3852 4 +      3980 TAAA
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             26328 4 +     26611 TAAA
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             3788 4 +     56096 TAAA
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        27065 4 -     42470 TAAA
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        43659 4 -     54384 TAAA
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              15339 3 +     53719 -AAG
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2549396 4 +  31725842 GAAA
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               56318 4 +     73687 TATA
i Heterohyrax_brucei.HetBruBak_scaffold_25354           I 500 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              145824 3 +    277961 -AAA
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      277140 3 -    477199 -AAA
i Hipposideros_armiger.JXIK01001085.1                   C 0 I 2
s Hipposideros_galeritus.HipGal_scaffold_104691              6299 3 -      9143 -AAA
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 I 2
s Hoolock_leuconedys.ctg79                                      2696 4 -   7690867 TAAA
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 14434 3 -     67322 -AAG
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           17322 4 -    119109 GAAA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              3261 4 +      5897 TAAA
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_1485652                              1681 4 -      1697 TAAA
i Hylobates_agilis.k141_1485652                         C 0 C 0
s Hylobates_klossii.k141_466549                              9705 4 +     11537 TAAA
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14622806 4 -  25970782 TAAA
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                              62 4 -      2977 TAAA
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             32193 4 -     60944 TAAA
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     4448 4 +     22540 AAAA
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7124321 4 +  13083262 AGAA
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_1884019                                   1533 4 -      2196 TAAA
i Indri_indri.k141_1884019                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               7577 3 +     17520 -AAA
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8563983 4 +  11848649 CAAA
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               22407 3 +     37189 -AAA
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          48290 4 -    147782 TAAA
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   112305 3 -    115756 -AAA
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 I 2
s Lemur_catta.scaffold_1                                258405348 4 - 285822530 TAAA
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        22217 4 +     39228 TAAA
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            51592 4 +     63517 TAAA
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        76836 4 +    116806 TAAA
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     29856 4 -     33031 TAAA
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3084133 3 -   3498232 -AAA
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    11312 4 +     22452 TAAA
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            134742 3 +   3060487 -AAA
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19245948 4 +  19376315 TAAA
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            8943 4 +     84689 TAAA
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3776694 4 +   6799190 TAAA
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20590858 4 -  62548349 TACA
i Loxodonta_africana.GL010040.1                         I 393 C 0
s Lycaon_pictus.CM007556.1                               11085487 2 +  39895028 -aa-
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             17624 4 +     74745 TAAA
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12704134 4 +  12821369 TAAA
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               6230 4 +      6569 TAAA
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           44532 4 +     63263 TAAA
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_925451                                  540 4 +     10231 TAAA
i Macaca_fuscata.k119_925451                            C 0 C 0
s Macaca_leonina.k141_3421209                                2681 4 +      3017 TAAA
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_mulatta.NC_041755.1                            196033211 4 + 196197964 TAAA
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11443317 4 +  11645122 TAAA
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_radiata.k141_1580474                                3073 4 -      3617 TAAA
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 13403 4 -     55006 TAAA
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43838440 4 +  43892939 TAAA
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                5662 4 -      5978 TAAA
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                700350 3 +    802869 -AAA
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 I 2
s Mandrillus_leucophaeus.scaffold125                     43435110 4 -  43563597 TAAA
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4447936 4 -   4543643 TAAA
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            144844 3 +    252755 -AAA
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             34919 3 +     58827 -AAA
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36872156 4 +  64221397 AGAA
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       63005 3 -    234502 -AAA
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 I 2
s Mellivora_capensis.MelCap_flattened_line_146202             726 3 -      1999 -AAA
i Mellivora_capensis.MelCap_flattened_line_146202       C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               10251 1 +     15977 T---
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 I 3
s Mesocricetus_auratus.KB708139.1                         1045056 1 -  26018355 T---
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Microcebus_murinus.CM007691.1                          16508462 4 +  47401472 CAAA
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  30424 4 -     48017 TAAA
i Microgale_talazaci.MicTal_scaffold_34660              I 379 I 11
s Micronycteris_hirsuta.MicHir_scaffold_37978               21431 3 -     32043 -AAA
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 I 2
s Microtus_ochrogaster.CM001673.1                        22818175 1 -  98408828 t---
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8208179 3 +  10048721 -AAA
i Miniopterus_natalensis.LDJU01000022.1                 C 0 I 2
s Miniopterus_schreibersii.MinSch_scaffold_24116            32851 3 +     45743 -AAA
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 I 2
s Miopithecus_ogouensis.k141_2666161                        33765 4 +     34273 TAAA
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         9641 3 -    104932 -AAA
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     3860 4 +      8497 CAAA
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 145177 3 +    154973 -AAA
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                159937 3 +    265003 -AAA
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 I 2
s Mungos_mungo.MunMun_flattened_line_8729                  143030 3 -    168139 -AAG
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          17816 3 -    100666 -AAA
i Murina_feae.MurFea_scaffold_2254                      C 0 I 2
s Mus_caroli.LT608236.1                                  70764665 1 +  92629107 T---
i Mus_caroli.LT608236.1                                 C 0 I 3
s Mus_musculus.chr16                                     75487701 1 +  98207768 t---
i Mus_musculus.chr16                                    C 0 I 3
s Mus_pahari.LT608305.1                                  67553889 1 +  89017189 T---
i Mus_pahari.LT608305.1                                 C 0 I 3
s Mus_spretus.CM004110.1                                 74328881 1 +  97876770 T---
i Mus_spretus.CM004110.1                                C 0 I 3
s Muscardinus_avellanarius.MusAve_scaffold_9643              9436 4 +     98495 TAAA
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 I 3
s Mustela_putorius.JH417978.1                             4422298 3 -  28371801 -aaa
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     88361 4 -    117718 GAAA
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               966141 3 +   8389877 -AAA
i Myotis_brandtii.KE161952.1                            C 0 I 2
s Myotis_davidii.KB114863.1                               5017830 3 +   6462685 -AAA
i Myotis_davidii.KB114863.1                             C 0 I 2
s Myotis_lucifugus.GL429887.1                             3463727 3 -   3747815 -AAA
i Myotis_lucifugus.GL429887.1                           C 0 I 2
s Myotis_myotis.MyoMyo_scaffold_6123                         8921 3 +     66751 -AAA
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 I 2
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3810 4 -      8794 CAAA
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            108737 2 +    362372 -ga-
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               6140 4 +     48152 TAAA
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4483033 3 -  14209539 -AAA
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3949790 3 -   4490290 -AAA
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  48044 3 +     94413 -AAA
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 I 2
s Nomascus_annamensis.k141_302224                             110 4 +      1516 TAAA
i Nomascus_annamensis.k141_302224                       C 0 C 0
s Nomascus_concolor.k141_49591                               1231 4 +      2014 TAAA
i Nomascus_concolor.k141_49591                          C 0 C 0
s Nomascus_gabriellae.k141_642452                             156 4 +      2851 TAAA
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             23035 4 -  18771707 TAAA
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                   784 4 +      4512 TAAA
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                28480 2 +   3668941 -aa-
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Ochotona_princeps.JH802095.1                            4994289 4 -  23139505 CACA
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3683858 4 +  10294119 GAAA
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             677678 3 -   3126709 -aaa
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  123443 1 +    145789 T---
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  35205 1 +     62360 T---
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7223474 3 -   7562323 -AAA
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              43176 4 -     66828 TAAG
i Orycteropus_afer.OryAfe_flattened_line_13509          I 773 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      305814 2 -    505867 -aa-
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       37290 4 +     38679 GAAA
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18006732 4 -  38779656 GAAA
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Pan_paniscus.CM003386.1                               127572793 4 - 205426864 TAAA
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120149946 4 - 196562556 TAAA
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  32494 3 +    295523 -ATG
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3636228 3 +  18214204 -ATG
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5025875 3 -   6340057 -ATG
i Panthera_tigris.KE721879.1                            C 0 C 0
s Papio_anubis.CM001492.2                               188153892 4 - 188283584 TAAA
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            50104 4 +     76494 TAAA
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47511289 4 +  47705337 TAAA
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 65266 4 -    104429 TAAA
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  15057 4 -     29451 TAAA
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                35460 4 +     35859 TAAA
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113814 1 -    135482 -A--
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           3333 4 -     23713 TAAA
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            22631 4 -     27972 TAAA
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      41241 4 -     45160 CGAA
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4948387 1 -   8017169 T---
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    10548 4 -     36578 GAAA
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            120091 3 -    122454 -AAA
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            95585 3 +    112873 -AAA
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 I 2
s Pithecia_albicans.k141_991845                             41775 4 -     61926 TAAA
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        23204 4 +     78826 TAAA
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              7155 4 -     15800 TAAA
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        10353 4 -     16101 TAAA
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          3662 4 +      9673 TAAA
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13472656 4 -  19735023 TAAA
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           11564 4 -     31692 TAAA
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           4157 3 +     21690 -AAA
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       21000 4 +     44506 TAAA
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        21210 4 +     67491 TAAA
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      11451 4 -     98129 TAAA
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     21056 4 +    147771 TAAA
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        21305 4 -     23762 TAAA
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          1772 4 -     55515 TAAA
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         21125 4 +    152463 TAAA
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      7885 4 +      8943 TAAA
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                         10845 4 +    134592 TAAA
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          21435 4 -     75465 TAAA
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              185337 4 -    373494 TAAA
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19805245 4 +  19899266 TAAA
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               3384 4 -     15069 TAAA
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              3518 4 +     14865 TAAA
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                76182 4 +     78963 TACA
i Procavia_capensis.ProCapCap_scaffold_15315            I 493 C 0
s Prolemur_simus.MPIZ01000048.1                           6846724 4 +  12164890 TAAA
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    666037 4 -   2312742 TAAA
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         1867 4 +     11805 TAAA
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           41202 4 +     52369 TAAA
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         33591 4 -     44753 TAAA
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            15512 4 +     27322 TAAA
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       15151 4 -     53241 TAAA
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         37422 4 -     48185 TAAA
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           31791 1 +     77221 t---
i Psammomys_obesus.NESX01026517.1                       C 0 I 3
s Pteronotus_parnellii.KE867983.1                            2605 3 -     27784 -GAA
i Pteronotus_parnellii.KE867983.1                       C 0 I 2
s Pteronura_brasiliensis.PteBra_flattened_line_1343        244392 3 -    344369 -AAA
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13244736 3 -  17261082 -AAA
i Pteropus_alecto.KB031157.1                            C 0 I 2
s Pteropus_vampyrus.KN525959.1                             602686 3 -   3946241 -AAA
i Pteropus_vampyrus.KN525959.1                          C 0 I 2
s Puma_concolor.QAVW01000427.1                          131532457 3 - 161321710 -AAG
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             27509 4 +     56732 TAAA
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6804000 4 +   6970761 TAAA
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             3394 4 +     18040 TAAA
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rattus_norvegicus.chr11                                13913752 1 +  90463843 C---
i Rattus_norvegicus.chr11                               C 0 I 3
s Rhinolophus_sinicus.LVEH01000179.1                      1786546 3 +   2252614 -AAA
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 I 2
s Rhinopithecus_bieti.k119_102124                           13946 4 -     14454 TAAA
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206375272 4 - 206558726 TAAA
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44852920 4 -  45163003 TAAA
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                18026 3 +    109198 -AAA
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 I 2
s Saimiri_boliviensis.NW_024100938.1                     15670874 4 -  43202129 TAAA
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        2740 4 +     34089 TAAA
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              2681 4 -     60842 TAAA
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              2776 4 +     67014 TAAA
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              2754 4 +     60816 TAAA
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 2691 4 -     76454 TAAA
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17339447 4 -  30362882 TAAA
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         18822 4 -     62485 TAAA
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   30113 3 -    114521 -AAA
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1527475                       25936 4 +     26421 TAAA
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       6396 4 +     20762 TAAA
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         40131 4 +     40653 TAAA
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                           10688 4 -     12194 TAAA
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     24110 4 -     27512 TAAA
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         33125 4 -     33692 TAAA
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   97980 1 -    120886 T---
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            16734 3 +    739146 -AAA
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2238238 4 +   2842873 AGAA
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             233143 3 -    276980 -GAA
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            25696 3 +     62062 -AAG
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189270612 3 + 218635234 -AAA
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        13063 4 -  13920577 TAAA
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               4532 3 -      6213 -AAA
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 I 2
s Tamandua_tetradactyla.TamTet_scaffold_26877               13485 4 +     45698 CAAA
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      805472 3 +   1148477 -AAA
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  56132 3 +     99546 -AAA
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               24775 4 +     42269 TAAA
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               58091 4 +     65473 TAAA
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194005428 4 - 194193292 TAAA
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             37606 4 -     47444 GAAA
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  2907 4 +      6782 TAAA
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  134615 3 -    259118 -AAA
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 I 2
s Trachypithecus_auratus.k141_738098                        24506 4 +     38948 TAAA
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   18233 4 -     32910 TAAA
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       24131 4 +     24652 TAAA
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      3009 4 -      3559 TAAA
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           40953 4 -     54611 TAAA
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       16954 4 +     17312 TAAA
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    24317 4 -     25040 TAAA
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          2978 4 +      3528 TAAA
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  49345 4 +     51589 TAAA
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       12521 4 +     14732 TAAA
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       2998 4 -     28054 TAAA
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44657793 4 -  44834318 TAAA
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        2802 4 +      3372 TAAA
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   3950 3 +     90398 -AAA
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16081320 4 +  31416278 TACA
i Trichechus_manatus.JH594618.1                         I 405 C 0
s Tupaia_chinensis.KB320831.1                             2790690 4 -   3938065 TAAA
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    3213 4 +     13056 TAAA
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69312191 3 -  96451834 -AAA
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 25300 3 -     25548 -AAA
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6512950 3 +  28682327 -TAA
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  3564 4 -     20643 TAAA
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             23106 4 -     33872 TAAA
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1523416 3 -   2331223 -AAA
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                135887 2 -    281493 -AA-
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       125328 4 -    134049 TAAA
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        212413 3 -    227762 -AAA
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     13572 4 -     20485 TGAA
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           5688 3 -      8775 -AAA
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Sorex_araneus.JH798170.1                               17748817 583 -  27805282 I
e Oryctolagus_cuniculus.CM000803.1                      141873967 0 + 163896628 C
e Chrysochloris_asiatica.ChrAsi_scaffold_141308              8820 2035 -     12508 T
e Saiga_tatarica.SaiTat_scaffold_82192                       6362 0 +     12214 C
e Rangifer_tarandus.RanTarSib_scaffold_24239                14560 0 +     68503 C
e Pantholops_hodgsonii.KE114631.1                         1064906 0 -   1292953 C
e Ovis_canadensis.OviCan_scaffold_6251                      77259 0 +    140051 C
e Ovis_aries.CM001582.2                                 134076045 0 - 275406953 C
e Okapia_johnstoni.LVCL01S0017931.1                         35778 0 +     78940 C
e Odocoileus_virginianus.KZ101650.1                       1078483 0 +   1425656 C
e Moschus_moschiferus.MosMos_scaffold_146101                 3355 0 -      4346 C
e Mesoplodon_bidens.MesBid_scaffold_183284                   2166 255 +      2166 T
e Hemitragus_hylocrius.HemHyl_scaffold_16669                26251 0 -     91191 C
e Giraffa_tippelskirchi.LVKQ01S012154.1                    180053 0 -    189561 C
e Elaphurus_davidianus.JRFZ01086400.1                     1490253 0 +   1727528 C
e Capra_hircus.CM004562.1                               135705207 0 - 157403528 C
e Capra_aegagrus.CM003214.1                              21323980 0 + 157394656 C
e Bubalus_bubalis.KI419065.1                              1229724 0 -   1914593 C
e Bos_taurus.CM000177.6                                 136293969 0 - 158972876 C
e Bos_mutus.JH883513.1                                     570610 0 -    998990 C
e Bos_indicus.CM003021.1                                138138236 0 - 161108492 C
e Bison_bison.KN264915.1                                  6557997 0 +   6870073 C
e Beatragus_hunteri.BeaHun_scaffold_21644                   41966 0 -     72089 C
e Antilocapra_americana.AntAmePen_scaffold_42841            29485 0 +     33004 C
e Ammotragus_lervia.NIVO01013474.1                        3518904 0 +   4113121 C
e Piliocolobus_tephrosceles.PDMG02000036.1               26737965 165 +  26888534 I
e Piliocolobus_kirkii.k141_557609                           19957 700 +     19957 T
e Piliocolobus_gordonorum.k141_1270531                        120 165 -     17985 I
e Piliocolobus_badius.k141_1497351                           3302 697 -      3310 T
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65667885 0 +  89412551 C
e Nycticebus_coucang.k141_2051882                            2265 0 +      6470 C
e Nycticebus_bengalensis.LG16                            65565537 0 -  95554990 C
e Macaca_tonkeana.k141_2870633                               2864 158 -     27140 T
e Macaca_nigra.k141_282495                                   2859 158 -     46448 T
e Macaca_maura.k141_251854                                  43912 158 -     79256 T

a score=0.000000
s hg38.chr4_GL000008v2_random                               10055 11 +    209709 AGTT----G-TTCT-TA
s Acinonyx_jubatus.LLWD01000356.1                         2032119 11 +   3721120 AGTT----G-TTCT-TT
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    110801  5 -    189883 -----------TCT-TC
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 3 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10655466 11 +  23371972 AGTT----g-ttct-tt
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7092391 11 -  16596857 AGTT----G-TTCT-TC
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   11239 11 -     22067 ATTA----G-TTCT-TT
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_3103707                  61068 11 +     61638 AGTT----G-TTCT-TA
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        52880 11 +     53391 AGTT----G-TTCT-TA
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         3605 11 +     72529 AGTT----G-TTCT-TA
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          3180 11 +      3797 AGTT----G-TTCT-TA
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             8326 11 -     18050 AGTT----G-TTCT-TA
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  9439 11 -     11521 TGTT----G-TTCT-TA
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              9003 11 -     21359 AGTT----G-TTCT-TA
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_298055                                  294 11 +      1823 AGTT----G-TTCT-TA
i Alouatta_juara.k141_298055                            C 0 C 0
s Alouatta_macconnelli.k141_1331706                          8294 11 -     10438 AGTT----G-TTCT-TA
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            4950 11 +      7047 AGTT----G-TTCT-TA
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             8236 11 +     10410 AGTT----G-TTCT-TA
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            2039 11 -      4927 CGTT----G-TTCT-TA
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             4969 11 +      6429 AGTT----G-TTCT-TA
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3518904 11 +   4113121 -GTT----G-CTCTCTT
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      389057  6 -    631301 --------G-TTTT-T-
i Anoura_caudifer.AnoCau_scaffold_422                   I 2 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            29485 11 +     33004 -GTT----G-TTCTCTT
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 60692 11 +     78111 AGTT----G-TTCT-TA
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            3633 11 +     22701 AGTT----G-TTCT-TA
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5747590 11 +   9889416 AGTT----G-TTCT-TA
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             4175 11 -    104377 AGTT----G-TTCT-TA
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               4181 11 +     23246 AGTT----G-TTCT-TA
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     2199 11 +      5067 TGTC----G-CTCT-TT
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      16129 11 +     17483 AGTT----G-TTCT-TT
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 7454  7 -     29036 --------G-CTCT-TT
i Artibeus_jamaicensis.ArtJam_scaffold_41619            I 2 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9537425 11 +  39197703 AGTT----G-TTCT-TA
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             58709 11 +     85812 AGTT----G-TTCT-TA
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 9708 11 +     89302 AGTT----G-TTCT-TA
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             14213 11 -     58268 AGTT----G-TTCT-TA
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             62204 11 +    119057 AGTT----G-TTCT-TA
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               4173 11 -     25888 AGTT----G-TTCT-TA
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 4945 11 -     16375 AGTC----A-TTCT-TT
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              1264 11 +      2719 AGTC----G-TTCT-TT
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26378911 12 +  51448160 AGTT----G-CTCTTTT
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        4143 12 -     13118 AGTT----G-CTCTTTT
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   41966 11 -     72089 -GTT----G-CTCTCTT
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6557997 11 +   6870073 -GTT----G-CTCTCTT
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138138236 11 - 161108492 -GTT----G-CTCTCTT
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     570610 11 -    998990 -GTT----G-CTCTCTT
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136293969 11 - 158972876 -GTT----G-CTCTCTT
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1229724 11 -   1914593 -GTT----G-CTCTCTT
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               112065 11 -    171031 AGTT----G-TTCT-TA
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 11091 11 +    125063 AGTT----G-TTCT-TA
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                13139 11 -    216513 AGTT----G-TTCT-TA
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        5679 11 -    134917 AGTT----G-TTCT-TA
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3218312  9 -   8989139 TGCT----C-T--T-TT
i Camelus_bactrianus.KN276303.1                         I 2 C 0
s Camelus_dromedarius.KN271192.1                           396017  9 -  15254737 TGCT----C-T--T-TT
i Camelus_dromedarius.KN271192.1                        I 2 C 0
s Camelus_ferus.KB016973.1                                2971750  9 +   6889770 TGCT----C-T--T-TT
i Camelus_ferus.KB016973.1                              I 2 C 0
s CanFam4.chr31                                          11516843 10 +  39901454 -GAT----A-TTTT-TT
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   11861 10 +     87036 -GAT----A-TTTT-TT
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11263504 10 -  35597290 -gat----a-tttt-tt
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11086033 10 +  39895921 -gat----a-tttt-tt
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16453057 10 -  44759192 -gat----a-tttt-tt
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21323980 11 + 157394656 -GTT----G-CTCTCTT
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135705207 11 - 157403528 -GTT----G-CTCTCTT
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_979108                   299 11 -      1248 AGCT----G-TTCT-TT
i Capromys_pilorides.CapPil_scaffold_979108             C 0 C 0
s Carlito_syrichta.NW_007248099.1                          307296 11 +    345090 AATT----A-TTCC-TT
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               58251  7 +     67245 --------G-TTCT-TT
i Carollia_perspicillata.CarPer_scaffold_4436           I 2 C 0
s Castor_canadensis.CasCan_scaffold_47037                   28748 11 +     33760 AGTT----T-TTCT-TC
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   157518 10 -    276539 AGGT----G-TT-T-TT
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15784905 11 -  24422027 ATTT----G-TCTT-TC
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15796839 11 -  24440124 ATTT----G-TTCT-TC
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       175030 11 +    436027 ATTT----G-TTCT-TC
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18888923 11 -  29618158 AGTT----G-TTCT-TA
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 6467 11 -     26817 AGTT----G-TTCT-TA
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                10707 11 +     25043 AGTT----G-TTCT-TA
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         6329 11 +     21754 AATT----A-TTCC-TT
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4362623 11 +   7569818 AGTT----C-TTCT-TT
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         2375 11 -      9338 AGTT----C-TTCT-TT
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6552864 11 +   6739814 AGTT----G-TTCT-TA
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      54341 11 -     54931 AGTT----G-TTCT-TA
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         19325 11 -     19697 AGTT----G-TTCT-TA
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         56856 11 -    107033 AGTT----G-TTCT-TA
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        3296 11 -      3853 AGTT----G-TTCT-TA
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          27227 11 +     30494 AGTT----G-TTCT-TA
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           3256 11 -      4022 AGTT----G-TTCT-TA
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          3145 11 -      3505 AGTT----G-TTCT-TA
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           21933 11 +     35983 AGTT----G-TTCT-TA
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11988470 11 +  12117833 AGTT----G-TTCT-TA
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46475223 11 +  46592721 AGTT----G-TTCT-TA
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      33052 11 +     33420 AGTT----G-TTCT-TA
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        3086 11 -      3443 AGTT----G-TTCT-TA
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      4084 11 -      4669 AGTT----G-TTCT-TA
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        3872 11 -      4411 AGTT----G-TTCT-TA
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         3407 11 -      4205 AGTT----G-TTCT-TA
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_4103795             6 10 -       420 AGTT----G-TT-T-TT
i Chaetophractus_vellerosus.ChaVel_scaffold_4103795     C 0 C 0
s Cheirogaleus_major.k141_1157592                           57249 11 -     68416 AGTC----A-TTCT-TT
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            6291 11 +     13308 AGTC----A-TTCT-TT
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             3727 11 -     18223 AGTG----A-TTCT-TA
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             20750 11 +     25473 AGTG----A-TTCT-TA
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           39789 11 +     57117 AGTG----A-TTCT-TA
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          44464 11 +     54541 AGTG----A-TTCT-TA
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15960061 11 +  43084221 AGCT----G-TTCT-AT
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         69274 11 +    196370 AGTT----G-TTCT-TA
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          13454 11 +     40510 AGTT----G-TTCT-TA
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15136691 11 -  15256731 AGTT----G-TTCT-TA
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      31737 11 -     53260 AGTT----G-TTCT-TA
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101142186 11 + 101219884 AGTT----G-TTCT-TA
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                15214 11 -     21363 AGTC----G-TACT-TT
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           760525 11 +    964067 AGTC----G-TACT-TT
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10887472 11 +  10971483 AGTT----G-TTCT-TA
i Colobus_angolensis.KN985967.1                         I 6404 C 0
s Colobus_guereza.LG08                                  147662225 11 + 156195979 AGTT----G-TTCT-TA
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            14215 11 +     23629 AGTT----G-TTCT-TA
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60611370 11 +  78930452 AGTT----T-TTCT-GT
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         38363  7 -     40477 --------G-ATCT-TT
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     I 2 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 276694  5 -    399297 -----------TCT-TC
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53027318  5 +  72327488 -----------TCT-TC
i Cricetulus_griseus.LT883672.1                         C 0 I 3
s Crocidura_indochinensis.CroInd_scaffold_38409             18428  9 -     19186 --TT----G-TCCT-TT
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            50134 11 -     70449 AGTT----G-TTCT-TT
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  206473 10 -    956709 -GGT----T-TTCT-TT
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 29020 11 -     67205 AATT----G-CTAT-TT
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                16064 11 +     26546 AGTT----G-TTCT-TT
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             57166 11 -    236241 AGTT----G-TACT-CC
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          180967 10 -   6883506 agtt----g-tt-t-tt
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16843106 11 +  31942871 AGTC----A-TTCT-TT
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80035592 12 -  96802777 AGTT----G-CTCTTTT
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18697561  7 -  18957592 --------G-ttct-tt
i Desmodus_rotundus.KZ672188.1                          I 2 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 321270 11 +    993696 AGTT----C-TTCT-TT
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   1922 11 +    151128 AGTT----C-TTCT-TT
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   155949 11 +    228994 AGTT----C-TTCT-TT
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3653668 13 +   4240102 tatt--ttt-tctt-tt
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 25233 11 +     28912 TATT----T-TCTT-TT
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                34417 11 -     73477 ATTT----G-TTCT-TC
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22994015 11 -  44670279 AGTC----A-TTcc-at
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 10940  7 +     24177 --------a-ttct-ta
i Eidolon_helvum.KE772537.1                             I 2 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1490253 11 +   1727528 -GTT----G-CTCTCTT
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7805889 15 +  15467074 aGTTGTTTG-TTCT-GT
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        237973  5 -    369425 -----------TCT-TC
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           4989  5 -      7838 -----------TCT-TC
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85869919 11 +  99434291 AGTT----G-ttct-tt
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4702514  7 +   6522550 --------G-CTCT-TT
i Eptesicus_fuscus.JH977687.1                           I 2 C 0
s Equus_asinus.JREZ01000062.1                             5851696 11 -   7175178 AGGT----G-TTCT-TT
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13350199 11 +  41866177 AGGT----G-TTCT-TT
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          11689 11 +     92910 AGGT----G-TTCT-TT
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11531248  9 +  16010500 --TT----G-TTCT-CC
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48768869 11 -  48907691 AGTT----G-TTCT-TA
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          313796 12 +    330699 AGTT----G-CTCTTTT
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             60250 12 +     89355 AGTT----G-CTCTTTT
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              3296 11 +     13586 AGTC----A-TTCT-TT
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               3231 11 -      6809 AGTC----A-TTCT-TT
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             9706 11 +     36558 AGTC----A-TTCT-TT
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             6022 11 +     60246 AGTC----A-TTCT-TT
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 9504 11 +    109717 AGTC----A-TTCT-TT
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               13884 11 +     16540 AGTC----A-TTCT-TT
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                14159 11 +     27497 AGTC----A-TTCT-TT
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           16616 11 +     26808 AGTC----A-TTCT-TT
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                31349 11 +     46535 AGTC----A-TTCT-TT
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              14072 11 -     29447 AGTC----A-TTCT-TT
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129891095 11 - 159252932 AGTT----G-TTCT-TT
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129278167 11 - 158578461 AGTT----G-ttct-tt
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 19302 11 +     52776 AGTT----G-TTCT-TT
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13891012 11 -  19261668 AGTT----G-TTCT-TT
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     209204 11 -    847004 AGTT----G-TTCT-TT
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           11583 11 -     43889 AGTT----G-TTCT-TT
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           8651 11 +     27357 AGTT----G-TTCT-TT
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               154564 11 +    324696 AGTG----G-ATAT-TT
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    180053 11 -    189561 -GTT----G-CTCTCTT
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           10969  5 -     18683 -----------TCC-TT
i Glis_glis.GliGli_scaffold_79770                       I 3 C 0
s Gorilla_beringei.k141_111300                               3453 11 -     14630 AGTT----G-TTCT-TA
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119650552 11 - 195582420 AGTT----G-TTCT-TA
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   75706  5 +    118900 -----------TCC-TT
i Graphiurus_murinus.GraMur_scaffold_4493               I 3 C 0
s Hapalemur_alaotrensis.k141_1198205                         3856 11 +      3980 AGTC----A-TTCT-TT
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             26332 11 +     26611 AGTC----A-TTCT-TT
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             3792 11 +     56096 AGTC----A-TTCT-TT
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        27069 11 -     42470 AGTC----A-TTCT-TT
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        43663 11 -     54384 ACTC----A-TTCT-TT
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              15342 11 +     53719 AGTT----G-TTCT-TT
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                26251 11 -     91191 -GTT----G-CTCTCTT
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2549400 11 +  31725842 AGTT----G-TTCT-TT
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               56322 11 +     73687 TGTT----G-TTCT-AC
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              145827 12 +    277961 AGTT----A-CTCTTTT
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      277145  7 -    477199 --------G-TTCT-TT
i Hipposideros_armiger.JXIK01001085.1                   I 2 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              6304  7 -      9143 --------G-TTCT-TT
i Hipposideros_galeritus.HipGal_scaffold_104691         I 2 C 0
s Hoolock_leuconedys.ctg79                                      2700 11 -   7690867 AGTT----G-TTCT-TA
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 14437 11 -     67322 AGTT----G-TTCT-TT
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           17326 11 -    119109 ATTT----G-TTCT-TC
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              3265 11 +      5897 AGTT----G-TTCT-TA
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_1485652                              1685 11 -      1697 AGTT----G-TTCT-TA
i Hylobates_agilis.k141_1485652                         C 0 C 0
s Hylobates_klossii.k141_466549                              9709 11 +     11537 AGTT----G-TTCT-TA
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14622810 11 -  25970782 AGTT----G-TTCT-TA
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                              66 11 -      2977 AGTT----G-TTCT-TA
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             32197 11 -     60944 AGTT----G-TTCT-TA
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     4452 11 +     22540 AGTT----G-TTCT-TT
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7124325  4 +  13083262 Agtt-------------
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 I 5
s Indri_indri.k141_1884019                                   1537 11 -      2196 AATC----A-TTCT-TT
i Indri_indri.k141_1884019                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               7580 12 +     17520 AGTT----G-CTCTTTT
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8563987 11 +  11848649 ATTT----G-TTCT-TT
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               22410 12 +     37189 AGTT----G-CTCTTTT
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          48294 11 -    147782 AGTT----G-TTCT-TA
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   112310  7 -    115756 --------G-TTTT-TT
i Lasiurus_borealis.LasBor_scaffold_5102                I 2 C 0
s Lemur_catta.scaffold_1                                258405352 11 - 285822530 AGTC----A-TTCT-TT
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        22221 11 +     39228 AGTA----G-TTCT-TT
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            51596 11 +     63517 AGTA----G-TTCT-TT
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        76840 11 +    116806 AGTA----G-TTCT-TT
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     29860 11 -     33031 AGTA----G-TTCT-TT
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3084136 11 -   3498232 ATTT----G-ttct-tt
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    11316 11 +     22452 AATT----G-TTTC-TT
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            134745 12 +   3060487 AGTT----G-CTCTTTT
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19245952 11 +  19376315 AGTT----G-TTCT-TA
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            8947 11 +     84689 AGTT----G-TGCT-TT
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3776698 11 +   6799190 AGTT----G-TGCT-TT
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20590862 11 -  62548349 AGTT----G-TTCT-AT
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11085489 10 +  39895028 -gtt----a-tttt-tt
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             17628 11 +     74745 AGTT----G-TTCT-TA
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12704138 11 +  12821369 AGTT----G-TTCT-TA
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               6234 11 +      6569 AGTT----G-TTCT-TA
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           44536 11 +     63263 AGTT----G-TTCT-TA
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_925451                                  544 11 +     10231 AGTT----G-TTCT-TA
i Macaca_fuscata.k119_925451                            C 0 C 0
s Macaca_leonina.k141_3421209                                2685 11 +      3017 AGTT----G-TTCT-TA
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_mulatta.NC_041755.1                            196033215 11 + 196197964 AGTT----G-TTCT-TA
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11443321 11 +  11645122 AGTT----G-TTCT-TA
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_radiata.k141_1580474                                3077 11 -      3617 AGTT----G-TTCT-TA
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 13407 11 -     55006 AGTT----G-TTCT-TA
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43838444 11 +  43892939 AGTT----G-TTCT-TA
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                5666 11 -      5978 AGTT----G-TTCT-TA
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                700355  6 +    802869 --------A-TT-T-TA
i Macroglossus_sobrinus.MacSob_scaffold_879             I 2 C 0
s Mandrillus_leucophaeus.scaffold125                     43435114 11 -  43563597 AGTT----G-TTCT-TA
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4447940 11 -   4543643 AGTT----G-TTCT-TA
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            144847 11 +    252755 AGTT----G-TTCT-TT
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             34922 11 +     58827 AGTT----G-TTCT-TT
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       63010  7 -    234502 --------G-TTCT-TT
i Megaderma_lyra.MegLyr_scaffold_3562                   I 2 C 0
s Marmota_marmota.CZRN01000005.1                         36872160  4 +  64221397 Agtt-------------
i Marmota_marmota.CZRN01000005.1                        C 0 I 5
s Mellivora_capensis.MelCap_flattened_line_146202             729 11 -      1999 AGTT----G-TTCT-TT
i Mellivora_capensis.MelCap_flattened_line_146202       C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               10255  5 +     15977 -----------TCT-TC
i Meriones_unguiculatus.MerUng_scaffold_52233           I 3 C 0
s Mesocricetus_auratus.KB708139.1                         1045057  5 -  26018355 -----------TCT-TC
i Mesocricetus_auratus.KB708139.1                       C 0 I 3
s Microcebus_murinus.CM007691.1                          16508466 11 +  47401472 AGTC----A-TTCT-TT
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_12817                  42294  9 -    101985 --TT----G-TTCC-AT
i Microgale_talazaci.MicTal_scaffold_12817              n 11 I 1
s Micronycteris_hirsuta.MicHir_scaffold_37978               21436  7 -     32043 --------G-TTCT-TT
i Micronycteris_hirsuta.MicHir_scaffold_37978           I 2 C 0
s Microtus_ochrogaster.CM001673.1                        22818176  5 -  98408828 -----------tct-tc
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8208184  7 +  10048721 --------G-TTCT-TT
i Miniopterus_natalensis.LDJU01000022.1                 I 2 I 1
s Miniopterus_schreibersii.MinSch_scaffold_24116            32856  7 +     45743 --------G-TTCT-TT
i Miniopterus_schreibersii.MinSch_scaffold_24116        I 2 I 1
s Miopithecus_ogouensis.k141_2666161                        33769 11 +     34273 AGTT----G-TTCT-TA
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         9644 11 -    104932 ATTT----G-TTCT-TT
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     3864 11 +      8497 AGTC----A-TTCT-TT
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 145180 12 +    154973 AGTT----G-CTCTTTT
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                159942  7 +    265003 --------G-TCAT-TT
i Mormoops_blainvillei.MorMeg_scaffold_2952             I 2 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 3355 11 -      4346 -GTT----G-CTCTCTT
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  143033 11 -    168139 AGTT----G-TTCT-TT
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          17821  7 -    100666 --------G-TTAC-CT
i Murina_feae.MurFea_scaffold_2254                      I 2 C 0
s Mus_caroli.LT608236.1                                  70764669  5 +  92629107 -----------TCT-TC
i Mus_caroli.LT608236.1                                 I 3 C 0
s Mus_musculus.chr16                                     75487705  5 +  98207768 -----------TCT-TC
i Mus_musculus.chr16                                    I 3 C 0
s Mus_pahari.LT608305.1                                  67553893  5 +  89017189 -----------TCT-TC
i Mus_pahari.LT608305.1                                 I 3 C 0
s Mus_spretus.CM004110.1                                 74328885  5 +  97876770 -----------TCT-TC
i Mus_spretus.CM004110.1                                I 3 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              9443  5 +     98495 -----------TTC-TT
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 3 C 0
s Mustela_putorius.JH417978.1                             4422301 11 -  28371801 agtt----g-ttct-tt
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     88365 11 -    117718 AGCT----G-TTCT-TT
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               966146  7 +   8389877 --------G-TTCT-TT
i Myotis_brandtii.KE161952.1                            I 2 C 0
s Myotis_davidii.KB114863.1                               5017835  7 +   6462685 --------G-TTCT-TT
i Myotis_davidii.KB114863.1                             I 2 C 0
s Myotis_lucifugus.GL429887.1                             3463732  7 -   3747815 --------G-TTCT-TT
i Myotis_lucifugus.GL429887.1                           I 2 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         8926  7 +     66751 --------G-TTCT-TT
i Myotis_myotis.MyoMyo_scaffold_6123                    I 2 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3814 11 -      8794 ATTT----G-TACT-TT
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            108739 11 +    362372 agta----t-ttca-tt
i Nannospalax_galili.KL201303.1                         C 0 I 7787
s Nasalis_larvatus.k141_153429                               6144 11 +     48152 AGTT----G-TTCT-TA
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4483036 11 -  14209539 ATTT----G-ttct-tt
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3949793 12 -   4490290 AGTT----G-CTCTTTT
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  48049  7 +     94413 --------G-TTCT-TT
i Noctilio_leporinus.NocLep_scaffold_12062              I 2 C 0
s Nomascus_annamensis.k141_302224                             114 11 +      1516 AGTT----G-TTCT-TA
i Nomascus_annamensis.k141_302224                       C 0 C 0
s Nomascus_concolor.k141_49591                               1235 11 +      2014 AGTT----G-TTCT-TA
i Nomascus_concolor.k141_49591                          C 0 C 0
s Nomascus_gabriellae.k141_642452                             160 11 +      2851 AGTT----G-TTCT-TA
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             23039 11 -  18771707 AGTT----G-TTCT-TA
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                   788 11 +      4512 AGTT----G-TTCT-TA
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                28482 10 +   3668941 -gtt----a-tttt-tt
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Ochotona_princeps.JH802095.1                            4994293 11 -  23139505 AGTT----G-TTCT-TT
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3683862 11 +  10294119 AGtt----g-ttct-tt
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             677681 11 -   3126709 attt----g-ttct-tt
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1078483 11 +   1425656 -GTT----T-CTCTCTT
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         35778 11 +     78940 -GTT----G-CTCTCTT
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  123444  5 +    145789 -----------TCT-TC
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  35206  5 +     62360 -----------GCT-GC
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7223477 12 -   7562323 AGTT----G-CTCTTTT
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              43180 11 -     66828 AGCT----G-TTCT-GT
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      305816 10 -    505867 -gtt----a-tttt-tt
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       37294 11 +     38679 AGTT----G-TTCT-TT
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18006736 11 -  38779656 AGTT----G-TTCT-TT
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134076045 11 - 275406953 -GTT----G-CTCTCTT
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      77259 11 +    140051 -GTT----G-CTCTCTT
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127572797 11 - 205426864 AGTT----G-TTCT-TA
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120149950 11 - 196562556 AGTT----G-TTCT-TA
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  32497 11 +    295523 AGTT----G-TTCT-TT
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3636231 11 +  18214204 AGTT----G-ttct-tt
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5025878 11 -   6340057 AGTT----G-ttct-tt
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1064906 11 -   1292953 -GTT----G-CTCTCTC
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188153896 11 - 188283584 AGTT----G-TTCT-TA
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            50108 11 +     76494 AGTT----G-TTCT-TA
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47511293 11 +  47705337 AGTT----G-TTCT-TA
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 65270 11 -    104429 AGTT----G-TTCT-TA
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  15061 11 -     29451 AGTT----G-TTCT-TA
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                35464 11 +     35859 AGTT----G-TTCT-TA
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113815  9 -    135482 --TA----G-TTGT-TT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           3337 11 -     23713 AGTT----G-TTCT-TT
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            22635 11 -     27972 AGTT----G-TTCT-TT
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      41245 11 -     45160 TATT----G-TCCT-TT
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4948388  5 -   8017169 -----------GCT-GC
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    10552 12 -     36578 AGTT----GGTTTT-TT
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            120094 12 -    122454 AGTT----G-CTCTTTT
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1610110                          38909 11 +     39618 AGTT----G-TTCT-TA
i Piliocolobus_badius.k141_1610110                      n 697 C 0
s Piliocolobus_gordonorum.k141_1270531                        285 11 -     17985 AGTT----G-TTCT-TA
i Piliocolobus_gordonorum.k141_1270531                  I 165 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26738130 11 +  26888534 AGTT----G-TTCT-TA
i Piliocolobus_tephrosceles.PDMG02000036.1              I 165 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            95590  7 +    112873 --------G-TTCT-TT
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        I 2 C 0
s Pithecia_albicans.k141_991845                             41779 11 -     61926 AGTT----G-TTCT-TA
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        23208 11 +     78826 AGTT----G-TTCT-TA
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              7159 11 -     15800 AGTT----G-TTCT-TA
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        10357 11 -     16101 AGTT----G-TTCT-TA
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          3666 11 +      9673 AGTT----G-TTCT-TA
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13472660 11 -  19735023 AGTT----G-TTCT-TA
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           11568 11 -     31692 AGTT----G-TTCT-TA
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           4160 12 +     21690 AGTT----G-CTCTTTT
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       21004 11 +     44506 AGTT----G-TTCT-TA
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        21214 11 +     67491 AGTT----G-TTCT-TA
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      11455 11 -     98129 AATT----G-TTCT-TA
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     21060 11 +    147771 AGTT----G-TTCT-TA
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        21309 11 -     23762 AGTT----G-TTCT-TA
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          1776 11 -     55515 AATT----G-TTCT-TA
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         21129 11 +    152463 AGTT----G-TTCT-TA
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      7889 11 +      8943 AGTT----G-TTCT-TA
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                         10849 11 +    134592 AGTT----G-TTCT-TA
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          21439 11 -     75465 AGTT----G-TTCT-TA
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              185341 11 -    373494 AGTT----A-TTCT-TA
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19805249 11 +  19899266 AGTT----G-TTCT-TA
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               3388 11 -     15069 AGTT----G-TTCT-TA
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              3522 11 +     14865 AGTT----G-TTCT-TA
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                76186 11 +     78963 TGTT----G-TTCT-AT
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6846728 11 +  12164890 AGTC----A-TTCT-TT
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    666041 11 -   2312742 AGTC----G-TTCT-TT
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         1871 11 +     11805 AGTC----G-TTGT-TT
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           41206 11 +     52369 AGTC----A-TTCT-TT
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         33595 11 -     44753 AGTC----G-TTCT-TT
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            15516 11 +     27322 AGTC----G-TTCT-TT
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       15155 11 -     53241 AGTC----G-TTCT-TT
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         37426 11 -     48185 AGTC----G-TTCT-TT
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           31795  5 +     77221 -----------tct-tc
i Psammomys_obesus.NESX01026517.1                       I 3 C 0
s Pteronotus_parnellii.KE867983.1                            2610  7 -     27784 --------G-TTCT-TT
i Pteronotus_parnellii.KE867983.1                       I 2 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        244395 11 -    344369 AGTT----G-TTCT-TT
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13244741  7 -  17261082 --------A-TTCT-TA
i Pteropus_alecto.KB031157.1                            I 2 C 0
s Pteropus_vampyrus.KN525959.1                             602691  7 -   3946241 --------A-TTCT-TA
i Pteropus_vampyrus.KN525959.1                          I 2 C 0
s Puma_concolor.QAVW01000427.1                          131532460 11 - 161321710 AGTT----G-TTCT-TT
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             27513 11 +     56732 AGTT----G-TTCT-TA
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6804004 11 +   6970761 AGTT----G-TTCT-TA
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             3398 11 +     18040 AGTT----G-TTCT-TA
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                14560 11 +     68503 -GTT----G-CTCTCTT
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13913756  5 +  90463843 -----------TCT-TC
i Rattus_norvegicus.chr11                               I 3 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1786551  7 +   2252614 --------G-TTCT-TT
i Rhinolophus_sinicus.LVEH01000179.1                    I 2 C 0
s Rhinopithecus_bieti.k119_102124                           13950 11 -     14454 AGTT----G-TTCT-TA
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206375276 11 - 206558726 AGTT----G-TTCT-TA
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44852924 11 -  45163003 AGTT----G-TTCT-TA
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                18031  7 +    109198 --------A-TTCT-TA
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            I 2 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       6362 11 +     12214 -GTT----G-CTCTCTT
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15670878 11 -  43202129 AGTT----G-TTCT-TA
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        2744 11 +     34089 AGTT----G-TTCT-TA
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              2685 11 -     60842 AGTT----G-TTCT-TA
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              2780 11 +     67014 AGTT----G-TTCT-TA
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              2758 11 +     60816 AGTT----G-TTCT-TA
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 2695 11 -     76454 AGTT----G-TTCT-TA
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17339451 11 -  30362882 AGTT----G-CTCT-TA
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         18826 11 -     62485 AGTT----G-CTCT-TA
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   30116 11 -    114521 CATT----T-TTCT-GT
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1527475                       25940 11 +     26421 AGTT----G-TTCT-TA
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       6400 11 +     20762 AGTT----G-TTCT-TA
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         40135 11 +     40653 AGTT----G-TTTT-TA
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                           10692 11 -     12194 AGTT----G-TTCT-TA
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     24114 11 -     27512 AGTT----G-TTCT-TA
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         33129 11 -     33692 AGTT----G-TTCT-TA
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   97981  5 -    120886 -----------TCT-TC
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            16737 11 +    739146 AACT----G-TTCT-TT
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2238242  4 +   2842873 Agtt-------------
i Spermophilus_dauricus.KZ294190.1                      C 0 I 5
s Spilogale_gracilis.SpiGra_flattened_line_905             233146 11 -    276980 AGTT----G-TTCT-TT
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            25699 11 +     62062 AGTT----G-TTCC-TT
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189270615 10 + 218635234 AGTT----G-TT-T-TT
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        13067 11 -  13920577 AGTA----G-TTCT-TA
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               4537  7 -      6213 --------G-TTCT-TT
i Tadarida_brasiliensis.TadBra_scaffold_145589          I 2 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               13489 11 +     45698 AGTT----G-TACT-TT
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      805475 11 +   1148477 AGTT----T-TTCT-TT
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  56135 11 +     99546 AGTT----T-TTCT-TT
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               24779 11 +     42269 AGTT----A-TTCC-TT
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               58095 11 +     65473 AGTT----A-TTCC-TT
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194005432 11 - 194193292 AGTT----G-TTCT-TA
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             37610 11 -     47444 AGTT----G-TTCC-TT
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  2911 10 +      6782 AGTT----G-TT-T-TT
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  134620  7 -    259118 --------G-TTCT-TT
i Tonatia_saurophila.TonSau_scaffold_3334               I 2 C 0
s Trachypithecus_auratus.k141_738098                        24510 11 +     38948 AGTT----G-TTCT-TA
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   18237 11 -     32910 AGTT----G-TTCT-TA
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       24135 11 +     24652 AGTT----G-TTCT-TA
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      3013 11 -      3559 AGTT----G-TTCT-TA
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           40957 11 -     54611 AGTT----G-TTCT-TA
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       16958 11 +     17312 AGTT----G-TTCT-TA
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    24321 11 -     25040 AGTT----G-TTCT-TA
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          2982 11 +      3528 AGTT----G-TTCT-TA
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  49349 11 +     51589 AGTT----G-TTCT-TA
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       12525 11 +     14732 AGTT----G-TTCT-TA
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       3002 11 -     28054 AGTT----G-TTCT-TA
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44657797 11 -  44834318 AGTT----G-TTCT-TA
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        2806 11 +      3372 AGTT----G-TTCT-TA
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   3953 12 +     90398 ACTT----G-CTATCTT
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16081324 11 +  31416278 AGTT----G-TTCT-AA
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2790694 10 -   3938065 AT-G----T-TTCC-TT
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    3217 10 +     13056 AT-T----T-TTCC-TT
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69312194 12 -  96451834 AGTT----G-CTCTTTT
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 25303 11 -     25548 AGTT----T-TTCC-AT
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6512953 11 +  28682327 AGTT----g-ttct-tt
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  3568 11 -     20643 AGTC----G-TTCT-TT
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             23110 11 -     33872 AGTC----G-TTCT-TT
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1523419  9 -   2331223 TGCT----C-T--T-TT
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                135889 10 -    281493 -GTT----A-TTTT-TT
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       125332 11 -    134049 AATT----G-TTCT-TT
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        212416 11 -    227762 ATTT----A-TTCT-TT
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     13576 11 -     20485 GGTT----G-TTCT-TC
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           5691 12 -      8775 AGTT----G-CTCTTTT
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Sorex_araneus.JH798170.1                               17748817 583 -  27805282 I
e Oryctolagus_cuniculus.CM000803.1                      141873967  0 + 163896628 C
e Chrysochloris_asiatica.ChrAsi_scaffold_141308              8820 2035 -     12508 T
e Mesoplodon_bidens.MesBid_scaffold_183284                   2166 255 +      2166 T
e Piliocolobus_kirkii.k141_557609                           19957 700 +     19957 T
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65667885  0 +  89412551 C
e Nycticebus_coucang.k141_2051882                            2265  0 +      6470 C
e Nycticebus_bengalensis.LG16                            65565537  0 -  95554990 C
e Macaca_tonkeana.k141_2870633                               2864 158 -     27140 T
e Macaca_nigra.k141_282495                                   2859 158 -     46448 T
e Macaca_maura.k141_251854                                  43912 158 -     79256 T

a score=0.000000
s hg38.chr4_GL000008v2_random                               10066 1 +    209709 A
s Acinonyx_jubatus.LLWD01000356.1                         2032130 1 +   3721120 A
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    110806 1 -    189883 A
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10655477 1 +  23371972 a
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7092402 1 -  16596857 A
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   11250 1 -     22067 G
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_3103707                  61079 1 +     61638 A
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        52891 1 +     53391 A
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         3616 1 +     72529 A
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          3191 1 +      3797 A
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             8337 1 -     18050 A
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  9450 1 -     11521 A
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              9014 1 -     21359 A
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_298055                                  305 1 +      1823 A
i Alouatta_juara.k141_298055                            C 0 C 0
s Alouatta_macconnelli.k141_1331706                          8305 1 -     10438 A
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            4961 1 +      7047 A
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             8247 1 +     10410 A
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            2050 1 -      4927 A
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             4980 1 +      6429 A
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3518915 1 +   4113121 A
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            29496 1 +     33004 A
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 60703 1 +     78111 A
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            3644 1 +     22701 A
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5747601 1 +   9889416 A
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             4186 1 -    104377 A
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               4192 1 +     23246 A
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     2210 1 +      5067 C
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      16140 1 +     17483 A
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 7461 1 -     29036 A
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9537436 1 +  39197703 A
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             58720 1 +     85812 A
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 9719 1 +     89302 A
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             14224 1 -     58268 A
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             62215 1 +    119057 A
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               4184 1 -     25888 A
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 4956 1 -     16375 A
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              1275 1 +      2719 A
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26378923 1 +  51448160 A
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        4155 1 -     13118 A
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   41977 1 -     72089 A
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6558008 1 +   6870073 A
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138138247 1 - 161108492 A
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     570621 1 -    998990 A
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136293980 1 - 158972876 A
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1229735 1 -   1914593 A
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               112076 1 -    171031 A
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 11102 1 +    125063 A
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                13150 1 -    216513 A
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        5690 1 -    134917 A
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3218321 1 -   8989139 A
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           396026 1 -  15254737 A
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2971759 1 +   6889770 A
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11516853 1 +  39901454 A
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   11871 1 +     87036 A
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11263514 1 -  35597290 a
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11086043 1 +  39895921 a
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16453067 1 -  44759192 a
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21323991 1 + 157394656 A
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135705218 1 - 157403528 A
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_979108                   310 1 -      1248 G
i Capromys_pilorides.CapPil_scaffold_979108             C 0 C 0
s Carlito_syrichta.NW_007248099.1                          307307 1 +    345090 A
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               58258 1 +     67245 A
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   28759 1 +     33760 A
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   157528 1 -    276539 A
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15784916 1 -  24422027 G
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15796850 1 -  24440124 G
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       175041 1 +    436027 G
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18888934 1 -  29618158 A
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 6478 1 -     26817 A
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                10718 1 +     25043 A
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         6340 1 +     21754 A
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4362634 1 +   7569818 A
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         2386 1 -      9338 A
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6552875 1 +   6739814 A
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      54352 1 -     54931 A
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         19336 1 -     19697 A
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         56867 1 -    107033 A
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        3307 1 -      3853 A
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          27238 1 +     30494 A
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           3267 1 -      4022 A
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          3156 1 -      3505 A
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           21944 1 +     35983 A
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11988481 1 +  12117833 A
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46475234 1 +  46592721 A
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      33063 1 +     33420 A
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        3097 1 -      3443 A
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      4095 1 -      4669 A
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        3883 1 -      4411 A
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         3418 1 -      4205 A
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_4103795            16 1 -       420 A
i Chaetophractus_vellerosus.ChaVel_scaffold_4103795     C 0 C 0
s Cheirogaleus_major.k141_1157592                           57260 1 -     68416 A
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            6302 1 +     13308 A
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             3738 1 -     18223 A
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             20761 1 +     25473 A
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           39800 1 +     57117 A
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          44475 1 +     54541 A
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15960072 1 +  43084221 T
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         69285 1 +    196370 A
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          13465 1 +     40510 A
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15136702 1 -  15256731 A
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      31748 1 -     53260 A
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101142197 1 + 101219884 A
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                15225 1 -     21363 G
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           760536 1 +    964067 G
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10887483 1 +  10971483 A
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147662236 1 + 156195979 A
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            14226 1 +     23629 A
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60611381 1 +  78930452 G
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         38370 1 -     40477 A
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 276699 1 -    399297 A
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53027326 1 +  72327488 A
i Cricetulus_griseus.LT883672.1                         I 3 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             18437 1 -     19186 G
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            50145 1 -     70449 A
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  206483 1 -    956709 G
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 29031 1 -     67205 G
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                16075 1 +     26546 A
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             57177 1 -    236241 A
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          180977 1 -   6883506 a
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16843117 1 +  31942871 A
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80035604 1 -  96802777 C
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18697568 1 -  18957592 a
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 321281 1 +    993696 A
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   1933 1 +    151128 A
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   155960 1 +    228994 G
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3653681 1 +   4240102 a
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 25244 1 +     28912 A
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                34428 1 -     73477 A
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22994026 1 -  44670279 a
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 10947 1 +     24177 a
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1490264 1 +   1727528 A
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7805904 1 +  15467074 A
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        237978 1 -    369425 A
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           4994 1 -      7838 A
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85869930 1 +  99434291 a
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4702521 1 +   6522550 A
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5851707 1 -   7175178 A
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13350210 1 +  41866177 A
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          11700 1 +     92910 A
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11531257 1 +  16010500 A
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48768880 1 -  48907691 A
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          313808 1 +    330699 A
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             60262 1 +     89355 A
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              3307 1 +     13586 A
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               3242 1 -      6809 A
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             9717 1 +     36558 A
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             6033 1 +     60246 A
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 9515 1 +    109717 A
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               13895 1 +     16540 A
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                14170 1 +     27497 A
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           16627 1 +     26808 A
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                31360 1 +     46535 A
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              14083 1 -     29447 A
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129891106 1 - 159252932 A
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129278178 1 - 158578461 a
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 19313 1 +     52776 A
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13891023 1 -  19261668 G
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     209215 1 -    847004 G
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           11594 1 -     43889 G
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           8662 1 +     27357 A
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               154575 1 +    324696 C
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    180064 1 -    189561 A
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           10974 1 -     18683 A
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               3464 1 -     14630 A
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119650563 1 - 195582420 A
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   75711 1 +    118900 A
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                         3867 1 +      3980 A
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             26343 1 +     26611 A
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             3803 1 +     56096 A
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        27080 1 -     42470 A
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        43674 1 -     54384 A
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              15353 1 +     53719 A
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                26262 1 -     91191 A
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2549411 1 +  31725842 G
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               56333 1 +     73687 A
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              145839 1 +    277961 A
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      277152 1 -    477199 A
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              6311 1 -      9143 A
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      2711 1 -   7690867 A
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 14448 1 -     67322 A
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           17337 1 -    119109 A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              3276 1 +      5897 A
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_1485652                              1696 1 -      1697 A
i Hylobates_agilis.k141_1485652                         C 0 T 551
s Hylobates_klossii.k141_466549                              9720 1 +     11537 A
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14622821 1 -  25970782 A
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                              77 1 -      2977 A
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             32208 1 -     60944 A
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     4463 1 +     22540 G
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7124334 1 +  13083262 c
i Ictidomys_tridecemlineatus.JH393315.1                 I 5 C 0
s Indri_indri.k141_1884019                                   1548 1 -      2196 A
i Indri_indri.k141_1884019                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               7592 1 +     17520 A
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8563998 1 +  11848649 G
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               22422 1 +     37189 A
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          48305 1 -    147782 A
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   112317 1 -    115756 A
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258405363 1 - 285822530 A
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        22232 1 +     39228 A
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            51607 1 +     63517 A
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        76851 1 +    116806 A
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     29871 1 -     33031 A
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3084147 1 -   3498232 a
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    11327 1 +     22452 A
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            134757 1 +   3060487 A
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19245963 1 +  19376315 A
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            8958 1 +     84689 A
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3776709 1 +   6799190 A
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20590873 1 -  62548349 A
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11085499 1 +  39895028 a
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             17639 1 +     74745 A
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12704149 1 +  12821369 A
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               6245 1 +      6569 A
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           44547 1 +     63263 A
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_925451                                  555 1 +     10231 A
i Macaca_fuscata.k119_925451                            C 0 C 0
s Macaca_leonina.k141_3421209                                2696 1 +      3017 A
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_mulatta.NC_041755.1                            196033226 1 + 196197964 A
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11443332 1 +  11645122 A
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_radiata.k141_1580474                                3088 1 -      3617 A
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 13418 1 -     55006 A
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43838455 1 +  43892939 A
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                5677 1 -      5978 A
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                700361 1 +    802869 A
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43435125 1 -  43563597 A
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4447951 1 -   4543643 A
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            144858 1 +    252755 A
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             34933 1 +     58827 A
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36872169 1 +  64221397 c
i Marmota_marmota.CZRN01000005.1                        I 5 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       63017 1 -    234502 A
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 I 143
s Mellivora_capensis.MelCap_flattened_line_146202             740 1 -      1999 A
i Mellivora_capensis.MelCap_flattened_line_146202       C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               10260 1 +     15977 A
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1045065 1 -  26018355 A
i Mesocricetus_auratus.KB708139.1                       I 3 C 0
s Microcebus_murinus.CM007691.1                          16508477 1 +  47401472 A
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  30439 1 -     48017 A
i Microgale_talazaci.MicTal_scaffold_34660              I 11 I 7
s Micronycteris_hirsuta.MicHir_scaffold_37978               21443 1 -     32043 A
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22818181 1 -  98408828 t
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8208192 1 +  10048721 A
i Miniopterus_natalensis.LDJU01000022.1                 I 1 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            32864 1 +     45743 A
i Miniopterus_schreibersii.MinSch_scaffold_24116        I 1 C 0
s Miopithecus_ogouensis.k141_2666161                        33780 1 +     34273 T
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         9655 1 -    104932 A
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     3875 1 +      8497 A
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 145192 1 +    154973 A
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                159949 1 +    265003 A
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 3366 1 -      4346 A
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  143044 1 -    168139 A
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          17828 1 -    100666 A
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70764674 1 +  92629107 A
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75487710 1 +  98207768 A
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67553898 1 +  89017189 A
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74328890 1 +  97876770 A
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              9448 1 +     98495 A
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4422312 1 -  28371801 a
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     88376 1 -    117718 G
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               966153 1 +   8389877 A
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5017842 1 +   6462685 A
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3463739 1 -   3747815 A
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         8933 1 +     66751 A
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3825 1 -      8794 G
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            116537 1 +    362372 a
i Nannospalax_galili.KL201303.1                         I 7787 C 0
s Nasalis_larvatus.k141_153429                               6155 1 +     48152 A
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4483047 1 -  14209539 a
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3949805 1 -   4490290 A
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  48056 1 +     94413 A
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_302224                             125 1 +      1516 A
i Nomascus_annamensis.k141_302224                       C 0 C 0
s Nomascus_concolor.k141_49591                               1246 1 +      2014 A
i Nomascus_concolor.k141_49591                          C 0 C 0
s Nomascus_gabriellae.k141_642452                             171 1 +      2851 A
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             23050 1 -  18771707 A
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                   799 1 +      4512 A
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                28492 1 +   3668941 a
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Ochotona_princeps.JH802095.1                            4994304 1 -  23139505 A
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3683873 1 +  10294119 g
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             677692 1 -   3126709 a
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1078494 1 +   1425656 A
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         35789 1 +     78940 A
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  123449 1 +    145789 A
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  35211 1 +     62360 C
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7223489 1 -   7562323 A
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              43191 1 -     66828 A
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      305826 1 -    505867 a
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       37305 1 +     38679 G
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18006747 1 -  38779656 A
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134076056 1 - 275406953 A
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      77270 1 +    140051 A
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127572808 1 - 205426864 A
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120149961 1 - 196562556 A
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  32508 1 +    295523 A
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3636242 1 +  18214204 a
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5025889 1 -   6340057 a
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1064917 1 -   1292953 A
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188153907 1 - 188283584 A
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            50119 1 +     76494 A
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47511304 1 +  47705337 A
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 65281 1 -    104429 A
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  15072 1 -     29451 A
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                35475 1 +     35859 A
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113824 1 -    135482 A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           3348 1 -     23713 T
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            22646 1 -     27972 T
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      41256 1 -     45160 A
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4948393 1 -   8017169 C
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    10564 1 -     36578 G
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            120106 1 -    122454 A
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1610110                          38920 1 +     39618 A
i Piliocolobus_badius.k141_1610110                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                        296 1 -     17985 A
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26738141 1 +  26888534 A
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            95597 1 +    112873 A
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             41790 1 -     61926 A
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        23219 1 +     78826 A
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              7170 1 -     15800 A
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        10368 1 -     16101 A
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          3677 1 +      9673 A
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13472671 1 -  19735023 A
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           11579 1 -     31692 A
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           4172 1 +     21690 A
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       21015 1 +     44506 A
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        21225 1 +     67491 A
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      11466 1 -     98129 A
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     21071 1 +    147771 A
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        21320 1 -     23762 A
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          1787 1 -     55515 A
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         21140 1 +    152463 A
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      7900 1 +      8943 A
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                         10860 1 +    134592 A
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          21450 1 -     75465 A
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              185352 1 -    373494 A
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19805260 1 +  19899266 A
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               3399 1 -     15069 A
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              3533 1 +     14865 A
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                76197 1 +     78963 A
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6846739 1 +  12164890 A
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    666052 1 -   2312742 A
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         1882 1 +     11805 A
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           41217 1 +     52369 A
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         33606 1 -     44753 A
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            15527 1 +     27322 A
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       15166 1 -     53241 A
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         37437 1 -     48185 A
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           31800 1 +     77221 a
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            2617 1 -     27784 A
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        244406 1 -    344369 A
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13244748 1 -  17261082 A
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             602698 1 -   3946241 A
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131532471 1 - 161321710 A
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             27524 1 +     56732 A
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6804015 1 +   6970761 A
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             3409 1 +     18040 A
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                14571 1 +     68503 A
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13913761 1 +  90463843 A
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1786558 1 +   2252614 A
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           13961 1 -     14454 A
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206375287 1 - 206558726 A
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44852935 1 -  45163003 A
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                18038 1 +    109198 A
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       6373 1 +     12214 A
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15670889 1 -  43202129 A
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        2755 1 +     34089 A
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              2696 1 -     60842 A
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              2791 1 +     67014 A
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              2769 1 +     60816 A
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 2706 1 -     76454 A
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17339462 1 -  30362882 A
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         18837 1 -     62485 A
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   30127 1 -    114521 T
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1527475                       25951 1 +     26421 A
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       6411 1 +     20762 A
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         40146 1 +     40653 A
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                           10703 1 -     12194 A
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     24125 1 -     27512 A
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         33140 1 -     33692 A
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   97986 1 -    120886 A
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            16748 1 +    739146 A
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2238251 1 +   2842873 c
i Spermophilus_dauricus.KZ294190.1                      I 5 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             233157 1 -    276980 T
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            25710 1 +     62062 A
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189270625 1 + 218635234 A
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        13078 1 -  13920577 A
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               4544 1 -      6213 A
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               13500 1 +     45698 G
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      805486 1 +   1148477 A
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  56146 1 +     99546 A
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               24790 1 +     42269 A
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               58106 1 +     65473 A
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194005443 1 - 194193292 A
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             37621 1 -     47444 C
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  2921 1 +      6782 A
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  134627 1 -    259118 A
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        24521 1 +     38948 A
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   18248 1 -     32910 A
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       24146 1 +     24652 A
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      3024 1 -      3559 A
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           40968 1 -     54611 A
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       16969 1 +     17312 A
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    24332 1 -     25040 A
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          2993 1 +      3528 A
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  49360 1 +     51589 A
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       12536 1 +     14732 A
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       3013 1 -     28054 A
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44657808 1 -  44834318 A
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        2817 1 +      3372 A
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   3965 1 +     90398 A
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16081335 1 +  31416278 A
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2790704 1 -   3938065 A
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    3227 1 +     13056 A
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69312206 1 -  96451834 A
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 25314 1 -     25548 T
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6512964 1 +  28682327 a
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  3579 1 -     20643 A
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             23121 1 -     33872 A
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1523428 1 -   2331223 A
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                135899 1 -    281493 A
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       125343 1 -    134049 C
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        212427 1 -    227762 A
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     13587 1 -     20485 G
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           5703 1 -      8775 A
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Sorex_araneus.JH798170.1                               17748817 583 -  27805282 I
e Oryctolagus_cuniculus.CM000803.1                      141873967 0 + 163896628 C
e Chrysochloris_asiatica.ChrAsi_scaffold_141308              8820 2035 -     12508 T
e Mesoplodon_bidens.MesBid_scaffold_183284                   2166 255 +      2166 T
e Anoura_caudifer.AnoCau_scaffold_422                      389063 0 -    631301 C
e Piliocolobus_kirkii.k141_557609                           19957 700 +     19957 T
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65667885 0 +  89412551 C
e Nycticebus_coucang.k141_2051882                            2265 0 +      6470 C
e Nycticebus_bengalensis.LG16                            65565537 0 -  95554990 C
e Macaca_tonkeana.k141_2870633                               2864 158 -     27140 T
e Macaca_nigra.k141_282495                                   2859 158 -     46448 T
e Macaca_maura.k141_251854                                  43912 158 -     79256 T

a score=0.000000
s hg38.chr4_GL000008v2_random                               10067  7 +    209709 ATCA---CG-----------T
s Acinonyx_jubatus.LLWD01000356.1                         2032131  7 +   3721120 ATCA---CA-----------T
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    110807  6 -    189883 TTCA---AA------------
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10655478  7 +  23371972 ttct---ca-----------t
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7092403  7 -  16596857 TTCA---ca-----------t
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   11251  4 -     22067 T------GC-----------A
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_3103707                  61080  7 +     61638 ATCA---CG-----------T
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        52892  7 +     53391 ATCA---CG-----------T
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         3617  7 +     72529 ATCA---CG-----------T
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          3192  7 +      3797 ATCA---CG-----------T
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             8338  7 -     18050 ATCA---CA-----------T
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  9451  7 -     11521 ATCA---CA-----------T
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              9015  7 -     21359 ATCA---CA-----------T
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_298055                                  306  7 +      1823 ATCA---CA-----------T
i Alouatta_juara.k141_298055                            C 0 C 0
s Alouatta_macconnelli.k141_1331706                          8306  7 -     10438 ATCA---CA-----------T
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            4962  7 +      7047 ATCA---CA-----------T
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             8248  7 +     10410 ATCA---CA-----------T
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            2051  7 -      4927 ATCA---CA-----------T
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             4981  7 +      6429 ATCA---CA-----------T
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3518916  7 +   4113121 GTCA---TG-----------T
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      389063  5 -    631301 --TA---TA-----------T
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            29497  7 +     33004 GTCA---CA-----------G
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 60704  7 +     78111 ATCA---CA-----------T
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            3645  7 +     22701 ATCA---CA-----------T
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5747602  7 +   9889416 ATCA---CA-----------T
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             4187  7 -    104377 ATCA---CA-----------T
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               4193  7 +     23246 ATCA---CA-----------T
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     2211  7 +      5067 TTCA---CT-----------T
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      16141  7 +     17483 TTCA---TG-----------T
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 7462  7 -     29036 TATA---TA-----------T
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9537437  7 +  39197703 ATCA---TA-----------T
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             58721  7 +     85812 ATCA---TA-----------T
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 9720  7 +     89302 ATCA---TA-----------T
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             14225  7 -     58268 ATCA---TA-----------T
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             62216  7 +    119057 ATCA---TA-----------T
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               4185  7 -     25888 ATCA---TA-----------T
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 4957  7 -     16375 TTCA---CG-----------T
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              1276  7 +      2719 TTCA---CG-----------T
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26378924  7 +  51448160 TTCA---CA-----------T
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        4156  7 -     13118 TTCA---CA-----------T
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   41978  7 -     72089 GTCA---TA-----------T
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6558009  7 +   6870073 GTCA---CA-----------T
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138138248  7 - 161108492 GTCA---CA-----------T
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     570622  7 -    998990 GTCA---CA-----------T
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136293981  7 - 158972876 GTCA---CA-----------T
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1229736  7 -   1914593 GTCA---CA-----------T
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               112077  7 -    171031 ATCA---CA-----------T
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 11103  7 +    125063 ATCA---CA-----------T
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                13151  7 -    216513 ATCA---CA-----------T
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        5691  7 -    134917 ATCA---CA-----------T
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3218322  7 -   8989139 TTCA---TA-----------C
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           396027  7 -  15254737 TTCA---TA-----------C
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2971760  7 +   6889770 TTCA---TA-----------C
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11516854  7 +  39901454 TTCA---CA-----------T
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   11872  7 +     87036 TTCA---CA-----------T
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11263515  7 -  35597290 ttca---ca-----------t
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11086044  7 +  39895921 ttca---ca-----------t
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16453068  7 -  44759192 ttca---ca-----------t
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21323992  7 + 157394656 GTCA---TA-----------T
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135705219  7 - 157403528 GTCA---TA-----------T
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_979108                   311  7 -      1248 TTTA---TA-----------T
i Capromys_pilorides.CapPil_scaffold_979108             C 0 C 0
s Carlito_syrichta.NW_007248099.1                          307308  7 +    345090 TTCA---CA-----------T
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               58259  7 +     67245 TTTA---TA-----------T
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   28760  7 +     33760 TTCA---TA-----------T
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   157529  7 -    276539 TTCA---CA-----------T
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15784917  7 -  24422027 TGTG---TG-----------T
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15796851  7 -  24440124 TGTG---TG-----------T
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       175042  7 +    436027 TGTG---TG-----------T
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18888935  7 -  29618158 ATCA---CA-----------T
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 6479  7 -     26817 ATCA---CA-----------T
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                10719  7 +     25043 ATCA---CA-----------T
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         6341  7 +     21754 TTCA---CA-----------T
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4362635  7 +   7569818 TTCA---CG-----------T
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         2387  7 -      9338 TTCA---CG-----------T
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6552876  7 +   6739814 ATCA---CG-----------T
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      54353  7 -     54931 ATCA---CG-----------T
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         19337  7 -     19697 ATCA---CG-----------T
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         56868  7 -    107033 ATCA---CG-----------T
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        3308  7 -      3853 ATCA---CG-----------T
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          27239  7 +     30494 ATCA---CG-----------T
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           3268  7 -      4022 ATCA---CG-----------T
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          3157  7 -      3505 ATCA---CG-----------T
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           21945  7 +     35983 ATCA---TG-----------T
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11988482  7 +  12117833 ATCA---CG-----------T
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46475235  7 +  46592721 ATCA---TG-----------T
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      33064  7 +     33420 ATCA---CG-----------T
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        3098  7 -      3443 ATCA---CG-----------T
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      4096  7 -      4669 ATCA---CG-----------T
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        3884  7 -      4411 ATCA---CG-----------T
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         3419  7 -      4205 ATCA---CG-----------T
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_4103795            17  7 -       420 TTCA---CT-----------T
i Chaetophractus_vellerosus.ChaVel_scaffold_4103795     C 0 C 0
s Cheirogaleus_major.k141_1157592                           57261  7 -     68416 TTCA---CA-----------T
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            6303  7 +     13308 TTCA---TG-----------T
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             3739  7 -     18223 ATCA---CA-----------T
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             20762  7 +     25473 ATCA---CA-----------T
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           39801  7 +     57117 ATCA---CA-----------T
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          44476  7 +     54541 ATCA---CA-----------T
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15960073  7 +  43084221 TTTA---CA-----------T
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         69286  7 +    196370 ATCA---CA-----------T
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          13466  7 +     40510 ATCA---CA-----------T
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15136703  7 -  15256731 ATCA---CG-----------T
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      31749  7 -     53260 ATCA---CG-----------T
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101142198  7 + 101219884 ATCA---CG-----------T
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                15226  7 -     21363 CTTG---CG-----------T
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           760537  7 +    964067 CTTG---CT-----------T
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10887484  7 +  10971483 ATCA---CG-----------T
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147662237  7 + 156195979 ATCA---CG-----------T
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            14227  7 +     23629 ATCA---CG-----------T
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60611382  7 +  78930452 TTCA---CA-----------T
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         38371  7 -     40477 TTCA---CA-----------T
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 276700  7 -    399297 TTCC---AA-----------T
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53027327  7 +  72327488 CTCA---GA-----------A
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             18438  7 -     19186 TACA---AA-----------T
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            50146  7 -     70449 TTCA---CA-----------T
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  206484  7 -    956709 CTTA---GA-----------T
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 29032  7 -     67205 TTTG---TA-----------T
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                16076  7 +     26546 TTTA---CA-----------T
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             57178  7 -    236241 CCAA---CA-----------C
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          180978  7 -   6883506 tttg---ct-----------t
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16843118  7 +  31942871 TTTA---CG-----------T
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80035605  7 -  96802777 TTCA---CA-----------T
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18697569  7 -  18957592 ttta---ta-----------t
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 321282  7 +    993696 CTCA---CG-----------T
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   1934  7 +    151128 TTCA---CG-----------T
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   155961  7 +    228994 TTTA---CA-----------T
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3653682  7 +   4240102 ttca---ca-----------t
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 25245  7 +     28912 TTCA---CA-----------T
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                34429  7 -     73477 TTTG---CG-----------T
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22994027  7 -  44670279 ttaa---at-----------t
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 10948  7 +     24177 ttCA---TA-----------T
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1490265  7 +   1727528 GTCA---CA-----------T
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7805905  7 +  15467074 TTAA---AT-----------T
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        237979  7 -    369425 TTAA---AA-----------T
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           4995  7 -      7838 TTAA---Aa-----------t
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85869931  7 +  99434291 ttca---ca-----------t
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4702522  7 +   6522550 TTTA---CA-----------T
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5851708  7 -   7175178 TTCA---CT-----------T
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13350211  7 +  41866177 TTCA---CT-----------T
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          11701  7 +     92910 TTCA---CT-----------T
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11531258  7 +  16010500 TTCA---TA-----------T
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48768881  7 -  48907691 ATCA---CG-----------T
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          313809  7 +    330699 TTCA---CA-----------T
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             60263  7 +     89355 TTCA---CA-----------T
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              3308  7 +     13586 CTCA---CG-----------T
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               3243  7 -      6809 CTCA---CA-----------T
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             9718  7 +     36558 CTCA---CG-----------T
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             6034  7 +     60246 CTCA---TG-----------T
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 9516  7 +    109717 CTCA---CG-----------T
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               13896  7 +     16540 CTCA---TG-----------T
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                14171  7 +     27497 CTCA---CG-----------T
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           16628  7 +     26808 CTCA---CG-----------T
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                31361  7 +     46535 CTCA---CA-----------T
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              14084  7 -     29447 CTCA---CA-----------T
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129891107  7 - 159252932 TTCA---CA-----------T
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129278179  7 - 158578461 ttca---ca-----------t
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 19314  7 +     52776 TTCA---CA-----------T
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13891024  7 -  19261668 TTTA---CA-----------T
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     209216  7 -    847004 TTGA---CA-----------T
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           11595  7 -     43889 TTGA---CA-----------T
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           8663  7 +     27357 TTGC---CA-----------T
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               154576  7 +    324696 CTCA---CA-----------T
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    180065  7 -    189561 GTCA---CA-----------T
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           10975  7 -     18683 TTCA---CA-----------T
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               3465  7 -     14630 ATCA---CA-----------T
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119650564  7 - 195582420 ATCA---CA-----------T
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   75712  7 +    118900 TTCA---CA-----------T
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                         3868  7 +      3980 TTCA---CA-----------T
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             26344  7 +     26611 TTCA---CA-----------T
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             3804  7 +     56096 TTCA---CA-----------T
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        27081  7 -     42470 TTCA---CA-----------T
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        43675  7 -     54384 TTCA---CA-----------T
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              15354  7 +     53719 TTCA---CA-----------T
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                26263  7 -     91191 GTCA---TA-----------T
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2549412  7 +  31725842 TTTA---CA-----------T
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               56334  7 +     73687 TTAG---CT-----------T
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              145840  7 +    277961 TTGA---CA-----------T
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      277153  7 -    477199 TTCA---CA-----------G
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              6312  7 -      9143 TTCA---CA-----------T
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      2712  7 -   7690867 ATCA---CA-----------T
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 14449  7 -     67322 TTCA---CA-----------T
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           17338  7 -    119109 TTTG---TG-----------T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              3277  7 +      5897 ATCA---CA-----------T
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_624065                                141  7 +      2112 GTCA---CA-----------T
i Hylobates_agilis.k141_624065                          n 551 C 0
s Hylobates_klossii.k141_466549                              9721  7 +     11537 ATCA---CA-----------T
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14622822  7 -  25970782 ATCA---CA-----------T
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                              78  7 -      2977 ATCA---CA-----------T
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             32209  7 -     60944 ATCA---CA-----------T
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     4464  7 +     22540 TTTA---CA-----------T
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7124335  7 +  13083262 ttca---ct-----------t
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_1884019                                   1549  7 -      2196 TTCA---CG-----------T
i Indri_indri.k141_1884019                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               7593  7 +     17520 TTCA---CA-----------T
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8563999  4 +  11848649 T------GA-----------G
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               22423  7 +     37189 TTCA---CA-----------T
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          48306  7 -    147782 ATCA---CA-----------T
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   112318  7 -    115756 TTTA---CA-----------T
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258405364  7 - 285822530 TTCA---CG-----------T
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        22233  7 +     39228 TTCA---CG-----------T
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            51608  7 +     63517 TTCA---CG-----------T
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        76852  7 +    116806 TTCA---CG-----------T
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     29872  7 -     33031 TTCA---CG-----------T
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3084148  7 -   3498232 ttca---ca-----------t
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    11328  7 +     22452 TTCA---CA-----------T
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            134758  7 +   3060487 TTCA---CA-----------T
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19245964  7 +  19376315 ATCA---CG-----------T
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            8959  7 +     84689 TTCA---CG-----------C
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3776710  7 +   6799190 TTCA---CG-----------C
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20590874  7 -  62548349 TTAA---CA-----------T
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11085500  7 +  39895028 ttca---ca-----------t
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             17640  7 +     74745 ATCA---CG-----------T
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12704150  7 +  12821369 ATCA---CG-----------T
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               6246  7 +      6569 ATCA---CG-----------T
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           44548  7 +     63263 ATCA---CG-----------T
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_925451                                  556  7 +     10231 ATCA---CG-----------T
i Macaca_fuscata.k119_925451                            C 0 C 0
s Macaca_leonina.k141_3421209                                2697  7 +      3017 ATCA---CG-----------T
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_mulatta.NC_041755.1                            196033227  7 + 196197964 ATCA---CG-----------T
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11443333  7 +  11645122 ATCA---CG-----------T
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_radiata.k141_1580474                                3089  7 -      3617 ATCA---CG-----------T
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 13419  7 -     55006 ATCA---CG-----------T
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43838456  7 +  43892939 ATCA---CG-----------T
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                5678  7 -      5978 ATCA---CG-----------T
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                700362  7 +    802869 TTCA---CA-----------T
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43435126  7 -  43563597 ATCA---CG-----------T
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4447952  7 -   4543643 ATCA---CG-----------T
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            144859  7 +    252755 TTCA---CA-----------C
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             34934  7 +     58827 TTCA---CA-----------T
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36872170  7 +  64221397 ttca---ct-----------t
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       63161  7 -    234502 TTCA---CA-----------T
i Megaderma_lyra.MegLyr_scaffold_3562                   I 143 C 0
s Mellivora_capensis.MelCap_flattened_line_146202             741  7 -      1999 TTCA---CA-----------T
i Mellivora_capensis.MelCap_flattened_line_146202       C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               10261  7 +     15977 TTTA---AA-----------T
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1045066  7 -  26018355 CTCA---AA-----------T
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Microcebus_murinus.CM007691.1                          16508478  7 +  47401472 TTCA---CG-----------T
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_12817                  42304  7 -    101985 TTAA---CA-----------T
i Microgale_talazaci.MicTal_scaffold_12817              I 1 I 81
s Micronycteris_hirsuta.MicHir_scaffold_37978               21444  7 -     32043 TTTA---TA-----------T
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22818182  7 -  98408828 ttaa---aa-----------t
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8208193  7 +  10048721 TTCA---TA-----------T
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            32865  7 +     45743 TTCA---TA-----------T
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        33781  7 +     34273 ATCA---CA-----------T
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         9656  7 -    104932 TTCA---CA-----------T
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     3876  7 +      8497 TTCA---CG-----------C
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 145193  7 +    154973 TTCA---CA-----------T
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                159950  7 +    265003 TTTA---TA-----------T
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 3367  7 -      4346 GTCA---CA-----------T
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  143045  7 -    168139 TTCA---CA-----------T
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          17829  7 -    100666 TTCA---CA-----------T
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70764675  7 +  92629107 CTCA---AA-----------T
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75487711  7 +  98207768 CTCA---AA-----------T
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67553899  7 +  89017189 ATCA---AA-----------T
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74328891  7 +  97876770 CTCA---AA-----------T
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              9449  7 +     98495 TTCA---CA-----------T
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4422313  7 -  28371801 ttca---ca-----------t
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     88377  7 -    117718 TTTA---TG-----------T
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               966154  7 +   8389877 TTCA---CA-----------T
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5017843  7 +   6462685 TTCA---CA-----------T
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3463740  7 -   3747815 TTCA---CA-----------T
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         8934  7 +     66751 TTCA---CA-----------T
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3826  7 -      8794 TTTG---CT-----------T
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            116538  7 +    362372 ttca---at-----------t
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               6156  7 +     48152 ATCA---CG-----------T
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4483048  7 -  14209539 ttca---ca-----------t
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3949806  7 -   4490290 TTCA---CA-----------T
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  48057  7 +     94413 TTTA---CA-----------C
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_302224                             126  7 +      1516 ATCA---CA-----------T
i Nomascus_annamensis.k141_302224                       C 0 C 0
s Nomascus_concolor.k141_49591                               1247  7 +      2014 ATCA---CA-----------T
i Nomascus_concolor.k141_49591                          C 0 C 0
s Nomascus_gabriellae.k141_642452                             172  7 +      2851 ACCA---CA-----------T
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             23051  7 -  18771707 ATCA---CA-----------T
i Nomascus_siki_b.tarseq_80                         C 0 I 36
s Nomascus_siki_a.k141_595747                                   800  7 +      4512 ATCA---CA-----------T
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                28493  7 +   3668941 ttca---ca-----------t
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Ochotona_princeps.JH802095.1                            4994305  7 -  23139505 TTCA---CA-----------T
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3683874  7 +  10294119 ttta---ta-----------t
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             677693  7 -   3126709 ttca---ca-----------t
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1078495  7 +   1425656 GTCA---GA-----------T
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         35790  7 +     78940 GTCA---CA-----------T
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  123450  7 +    145789 TTAA---AA-----------T
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  35212  7 +     62360 TTCA---AG-----------T
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7223490  7 -   7562323 TTCA---CA-----------T
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              43192  7 -     66828 TTAA---CT-----------T
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      305827  7 -    505867 ttca---ca-----------t
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       37306  7 +     38679 TTGA---CA-----------T
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18006748  7 -  38779656 TTGA---CA-----------T
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134076057  7 - 275406953 GTCA---TA-----------T
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      77271  7 +    140051 GTCA---TA-----------T
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127572809  7 - 205426864 ATCA---CA-----------T
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120149962  7 - 196562556 ATCA---CA-----------T
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  32509  7 +    295523 TTCA---CA-----------T
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3636243  7 +  18214204 ttca---ca-----------t
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5025890  7 -   6340057 ttca---ca-----------t
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1064918  7 -   1292953 GTCA---TA-----------T
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188153908  7 - 188283584 ATCA---CG-----------T
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            50120  7 +     76494 ATCA---CG-----------T
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47511305  7 +  47705337 ATCA---CG-----------T
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 65282  7 -    104429 ATCA---CG-----------T
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  15073  7 -     29451 ATCA---CG-----------T
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                35476  7 +     35859 ATCA---CG-----------T
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113825  7 -    135482 TTCC---CA-----------T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           3349  7 -     23713 TTCA---TG-----------T
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            22647  7 -     27972 TTCA---TG-----------T
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      41257  7 -     45160 TTCA---CA-----------T
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4948394  7 -   8017169 TTCA---AA-----------T
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    10565  7 -     36578 TTTA---CA-----------C
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            120107  7 -    122454 TTCA---CA-----------T
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1610110                          38921  7 +     39618 ATCA---CG-----------T
i Piliocolobus_badius.k141_1610110                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                        297  7 -     17985 ATCA---CG-----------T
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26738142  7 +  26888534 ATCA---CG-----------T
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            95598  7 +    112873 TTTA---CA-----------T
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             41791  7 -     61926 ATCA---CA-----------T
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        23220  7 +     78826 ATCA---CA-----------T
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              7171  7 -     15800 ATCA---CA-----------T
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        10369  7 -     16101 ATCA---CA-----------T
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          3678  7 +      9673 ATCA---CA-----------T
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13472672  7 -  19735023 ATCA---CA-----------T
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           11580  7 -     31692 ATCA---CA-----------T
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           4173  7 +     21690 TTTA---CA-----------T
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       21016  7 +     44506 ATCA---TA-----------T
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        21226  7 +     67491 ATCA---TA-----------T
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      11467  7 -     98129 ATCA---TA-----------T
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     21072  7 +    147771 ATCA---TA-----------T
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        21321  7 -     23762 ATCA---TA-----------T
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          1788  7 -     55515 ATCA---TA-----------T
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         21141  7 +    152463 ATCA---TA-----------T
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      7901  7 +      8943 ATCA---TA-----------T
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                         10861  7 +    134592 ATCA---TA-----------T
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          21451  7 -     75465 ATCA---TA-----------T
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              185353  7 -    373494 ATCA---CA-----------T
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19805261  7 +  19899266 ATCA---CA-----------T
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               3400  7 -     15069 ATCA---TG-----------T
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              3534  7 +     14865 ATCA---CG-----------T
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                76198  7 +     78963 CTAG---CT-----------T
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6846740  7 +  12164890 TTCA---CA-----------T
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    666053  7 -   2312742 TTCA---CG-----------T
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         1883  7 +     11805 TTCA---CG-----------T
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           41218  7 +     52369 TTCA---CG-----------T
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         33607  7 -     44753 TTCA---CG-----------T
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            15528  7 +     27322 TTCA---CG-----------T
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       15167  7 -     53241 TTCA---CG-----------T
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         37438  7 -     48185 TTCA---CG-----------T
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           31801 18 +     77221 ttta---aagaagaaaaacat
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            2618  7 -     27784 TCTA---CA-----------T
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        244407  7 -    344369 TTCA---CA-----------T
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13244749  7 -  17261082 TTCA---TA-----------T
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             602699  7 -   3946241 TTCA---TA-----------T
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131532472  7 - 161321710 ATCA---CA-----------T
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             27525  7 +     56732 ATCA---CG-----------T
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6804016  7 +   6970761 ATCC---CG-----------T
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             3410  7 +     18040 ATCC---CG-----------T
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                14572  7 +     68503 GTCA---CA-----------T
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13913762  7 +  90463843 TTCA---AA-----------T
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1786559  7 +   2252614 TTCA---CA-----------T
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           13962  7 -     14454 ATCA---CG-----------T
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206375288  7 - 206558726 ATCA---CG-----------T
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44852936  7 -  45163003 ATCA---CG-----------T
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                18039  7 +    109198 TTCA---TA-----------T
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       6374  7 +     12214 GTCA---CA-----------T
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15670890  7 -  43202129 ATCA---CA-----------T
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        2756  7 +     34089 ATCA---CA-----------T
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              2697  7 -     60842 ATCA---CA-----------T
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              2792  7 +     67014 ATCA---CA-----------T
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              2770  7 +     60816 ATCA---CA-----------T
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 2707  7 -     76454 ATCA---CA-----------T
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17339463  7 -  30362882 ATCA---CA-----------T
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         18838  7 -     62485 ATCA---CA-----------T
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   30128  7 -    114521 TTCA---CA-----------T
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1527475                       25952  7 +     26421 ATCA---CG-----------T
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       6412  7 +     20762 ATCA---CG-----------T
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         40147  7 +     40653 ATCA---CG-----------T
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                           10704  7 -     12194 ATCA---CG-----------T
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     24126  7 -     27512 ATCA---CG-----------T
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         33141  7 -     33692 ATCA---CG-----------T
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   97987  7 -    120886 TTTA---CA-----------T
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            16749  7 +    739146 TTCA---CA-----------T
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17749400  1 -  27805282 --------------------T
i Sorex_araneus.JH798170.1                              I 583 C 0
s Spermophilus_dauricus.KZ294190.1                        2238252  7 +   2842873 ttca---ct-----------t
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             233158  7 -    276980 TTCA---CA-----------T
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            25711  7 +     62062 GTCA---CA-----------T
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189270626  7 + 218635234 TTCA---CA-----------T
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        13079  7 -  13920577 ATCA---CA-----------T
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               4545  7 -      6213 TTCA---CA-----------T
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               13501  7 +     45698 TTTG---CT-----------T
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      805487  7 +   1148477 TTCA---CT-----------T
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  56147  7 +     99546 TTCA---CT-----------T
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               24791  7 +     42269 GTCA---CA-----------T
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               58107  7 +     65473 GTCA---CA-----------T
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194005444  7 - 194193292 ATCA---CG-----------T
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             37622  7 -     47444 TTTA---CA-----------T
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  2922  7 +      6782 TTCA---CT-----------T
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  134628  7 -    259118 TTTA---TA-----------T
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        24522  7 +     38948 ATCA---CG-----------T
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   18249  7 -     32910 ATCA---CG-----------T
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       24147  7 +     24652 ATCA---CG-----------T
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      3025  7 -      3559 ATCA---CG-----------T
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           40969  7 -     54611 ATCA---CG-----------T
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       16970  7 +     17312 ATCA---CG-----------T
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    24333  7 -     25040 ATCA---CG-----------T
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          2994  7 +      3528 ATCA---CG-----------T
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  49361  7 +     51589 ATCA---CG-----------T
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       12537  7 +     14732 ATCA---CG-----------T
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       3014  7 -     28054 ATCA---CG-----------T
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44657809  7 -  44834318 ATCA---CG-----------T
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        2818  7 +      3372 ATCA---CG-----------T
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   3966  7 +     90398 TTCA---CA-----------T
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16081336  7 +  31416278 TTAA---CT-----------G
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2790705  7 -   3938065 TTCA---CA-----------T
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    3228  7 +     13056 TTCA---CA-----------T
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69312207  7 -  96451834 TTCA---CA-----------T
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 25315  7 -     25548 CTCA---TA-----------T
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6512965  7 +  28682327 ttct---ca-----------t
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  3580  7 -     20643 TTCA---TG-----------T
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             23122  7 -     33872 TTCA---TG-----------T
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1523429  7 -   2331223 TTCA---TA-----------T
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                135900  7 -    281493 TTCA---CA-----------T
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       125344  7 -    134049 TTCA---TT-----------T
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        212428  7 -    227762 TTCA---CA-----------T
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     13588  7 -     20485 T---CCGTG-----------T
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           5704  7 -      8775 TTCA---CA-----------T
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Oryctolagus_cuniculus.CM000803.1                      141873967  0 + 163896628 C
e Chrysochloris_asiatica.ChrAsi_scaffold_141308              8820 2035 -     12508 T
e Mesoplodon_bidens.MesBid_scaffold_183284                   2166 255 +      2166 T
e Piliocolobus_kirkii.k141_557609                           19957 700 +     19957 T
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65667885  0 +  89412551 C
e Nycticebus_coucang.k141_2051882                            2265  0 +      6470 C
e Nycticebus_bengalensis.LG16                            65565537  0 -  95554990 C
e Macaca_tonkeana.k141_2870633                               2864 158 -     27140 T
e Macaca_nigra.k141_282495                                   2859 158 -     46448 T
e Macaca_maura.k141_251854                                  43912 158 -     79256 T

a score=0.000000
s hg38.chr4_GL000008v2_random                               10074 2 +    209709 GA
s Acinonyx_jubatus.LLWD01000356.1                         2032138 2 +   3721120 TT
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    110813 2 -    189883 TA
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10655485 2 +  23371972 tt
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7092410 2 -  16596857 tt
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   11255 2 -     22067 TG
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_3103707                  61087 2 +     61638 GA
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        52899 2 +     53391 GA
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         3624 2 +     72529 GA
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          3199 2 +      3797 GA
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             8345 2 -     18050 GA
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  9458 2 -     11521 GA
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              9022 2 -     21359 GA
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_298055                                  313 2 +      1823 GA
i Alouatta_juara.k141_298055                            C 0 I 74
s Alouatta_macconnelli.k141_1331706                          8313 2 -     10438 GA
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            4969 2 +      7047 GA
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             8255 2 +     10410 GA
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            2058 2 -      4927 GA
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             4988 2 +      6429 GA
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3518923 2 +   4113121 TA
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      389068 2 -    631301 AA
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            29504 2 +     33004 GA
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 60711 2 +     78111 GA
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            3652 2 +     22701 GA
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5747609 2 +   9889416 GA
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             4194 2 -    104377 GA
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               4200 2 +     23246 GA
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     2218 2 +      5067 TA
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      16148 2 +     17483 TA
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 7469 2 -     29036 TA
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9537444 2 +  39197703 GA
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             58728 2 +     85812 GA
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 9727 2 +     89302 GA
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             14232 2 -     58268 GA
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             62223 2 +    119057 GA
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               4192 2 -     25888 GA
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 4964 2 -     16375 TA
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              1283 2 +      2719 TA
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26378931 2 +  51448160 TA
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        4163 2 -     13118 TA
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   41985 2 -     72089 TA
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6558016 2 +   6870073 TA
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138138255 2 - 161108492 TA
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     570629 2 -    998990 TA
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136293988 2 - 158972876 TA
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1229743 2 -   1914593 TA
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               112084 2 -    171031 GA
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 11110 2 +    125063 GA
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                13158 2 -    216513 GA
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        5698 2 -    134917 GA
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3218329 2 -   8989139 TA
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           396034 2 -  15254737 TA
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2971767 2 +   6889770 TA
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11516861 2 +  39901454 TT
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   11879 2 +     87036 TT
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11263522 2 -  35597290 tt
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11086051 2 +  39895921 tt
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16453075 2 -  44759192 tt
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21323999 2 + 157394656 TA
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135705226 2 - 157403528 TA
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_979108                   318 2 -      1248 TA
i Capromys_pilorides.CapPil_scaffold_979108             C 0 C 0
s Carlito_syrichta.NW_007248099.1                          307315 2 +    345090 GA
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               58266 2 +     67245 TA
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   28767 2 +     33760 TA
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   157536 2 -    276539 TC
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15784924 2 -  24422027 TA
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15796858 2 -  24440124 TA
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       175049 2 +    436027 TA
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18888942 2 -  29618158 CA
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 6486 2 -     26817 CA
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                10726 2 +     25043 CA
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         6348 2 +     21754 GA
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4362642 2 +   7569818 TA
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         2394 2 -      9338 TA
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6552883 2 +   6739814 GA
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      54360 2 -     54931 GA
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         19344 2 -     19697 GA
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         56875 2 -    107033 GA
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        3315 2 -      3853 GA
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          27246 2 +     30494 GA
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           3275 2 -      4022 GA
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          3164 2 -      3505 GA
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           21952 2 +     35983 GA
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11988489 2 +  12117833 GA
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46475242 2 +  46592721 GA
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      33071 2 +     33420 GA
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        3105 2 -      3443 GA
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      4103 2 -      4669 GA
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        3891 2 -      4411 GA
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         3426 2 -      4205 GA
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_4103795            24 2 -       420 TA
i Chaetophractus_vellerosus.ChaVel_scaffold_4103795     C 0 n 0
s Cheirogaleus_major.k141_1157592                           57268 2 -     68416 TA
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            6310 2 +     13308 TA
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             3746 2 -     18223 GA
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             20769 2 +     25473 GA
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           39808 2 +     57117 GA
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          44483 2 +     54541 GA
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15960080 2 +  43084221 TA
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         69293 2 +    196370 GA
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          13473 2 +     40510 GA
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15136710 2 -  15256731 GA
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      31756 2 -     53260 GA
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101142205 2 + 101219884 GA
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                15233 2 -     21363 TA
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           760544 2 +    964067 TA
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10887491 2 +  10971483 GA
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147662244 2 + 156195979 GA
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            14234 2 +     23629 GA
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60611389 1 +  78930452 -A
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         38378 2 -     40477 TA
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 276707 2 -    399297 TA
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53027334 2 +  72327488 TG
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             18445 2 -     19186 TA
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            50153 2 -     70449 TT
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  206491 2 -    956709 TA
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 29039 2 -     67205 TA
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                16083 2 +     26546 TA
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             57185 2 -    236241 TA
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          180985 2 -   6883506 ta
i Dasypus_novemcinctus.JH568778.1                       C 0 I 1443
s Daubentonia_madagascariensis.ctg11                     16843125 2 +  31942871 TA
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80035612 2 -  96802777 TA
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18697576 2 -  18957592 ta
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 321289 2 +    993696 TA
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   1941 2 +    151128 TA
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   155968 2 +    228994 TA
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3653689 2 +   4240102 tA
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 25252 2 +     28912 TA
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                34436 2 -     73477 TA
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22994034 2 -  44670279 ta
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 10955 2 +     24177 TA
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1490272 2 +   1727528 TA
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7805912 2 +  15467074 TA
i Elephantulus_edwardii.JH947210.1                      C 0 T 1445
s Ellobius_lutescens.LOEQ01003611.1                        237986 2 -    369425 CA
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           5002 2 -      7838 ca
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85869938 2 +  99434291 tt
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4702529 2 +   6522550 TG
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5851715 2 -   7175178 TA
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13350218 2 +  41866177 TA
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          11708 2 +     92910 TA
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11531265 2 +  16010500 TA
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48768888 2 -  48907691 GA
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          313816 2 +    330699 TA
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             60270 2 +     89355 TA
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              3315 2 +     13586 TA
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               3250 2 -      6809 TA
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             9725 2 +     36558 TA
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             6041 2 +     60246 TA
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 9523 2 +    109717 TA
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               13903 2 +     16540 TA
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                14178 2 +     27497 TA
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           16635 2 +     26808 TA
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                31368 2 +     46535 TA
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              14091 2 -     29447 TA
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129891114 2 - 159252932 TT
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129278186 2 - 158578461 tt
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 19321 2 +     52776 TT
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13891031 2 -  19261668 TA
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     209223 2 -    847004 TA
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           11602 2 -     43889 TA
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           8670 2 +     27357 TA
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               154583 2 +    324696 TA
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    180072 2 -    189561 TA
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           10982 2 -     18683 TA
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               3472 2 -     14630 GA
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119650571 2 - 195582420 GA
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   75719 2 +    118900 TA
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                         3875 2 +      3980 TA
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             26351 2 +     26611 TA
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             3811 2 +     56096 TA
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        27088 2 -     42470 TA
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        43682 2 -     54384 TA
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              15361 2 +     53719 TT
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                26270 2 -     91191 TA
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2549419 2 +  31725842 TC
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               56341 2 +     73687 TA
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              145847 2 +    277961 TA
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      277160 2 -    477199 TA
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              6319 2 -      9143 TA
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      2719 2 -   7690867 GA
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 14456 2 -     67322 TT
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           17345 2 -    119109 TA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              3284 2 +      5897 GA
i Hylobates_abbotti.k141_493872                         C 0 I 25
s Hylobates_agilis.k141_624065                                148 2 +      2112 GA
i Hylobates_agilis.k141_624065                          C 0 C 0
s Hylobates_klossii.k141_466549                              9728 2 +     11537 GA
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14622829 2 -  25970782 GA
i Hylobates_pileatus_b.ContigUN                                C 0 T 2656
s Hylobates_muelleri.k141_1389047                              85 2 -      2977 GA
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             32216 2 -     60944 GA
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     4471 2 +     22540 TA
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7124342 2 +  13083262 ta
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_1884019                                   1556 2 -      2196 TA
i Indri_indri.k141_1884019                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               7600 2 +     17520 TA
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8564003 2 +  11848649 TG
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               22430 2 +     37189 TA
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          48313 2 -    147782 GA
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   112325 2 -    115756 TG
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258405371 2 - 285822530 TA
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        22240 2 +     39228 TA
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            51615 2 +     63517 TA
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        76859 2 +    116806 TA
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     29879 2 -     33031 TA
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3084155 2 -   3498232 tt
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    11335 2 +     22452 TT
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            134765 2 +   3060487 TA
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19245971 2 +  19376315 GA
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            8966 2 +     84689 TA
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3776717 2 +   6799190 TA
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20590881 2 -  62548349 TG
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11085507 2 +  39895028 tt
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             17647 2 +     74745 GA
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12704157 2 +  12821369 GA
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               6253 2 +      6569 GA
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           44555 2 +     63263 GA
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_925451                                  563 2 +     10231 GA
i Macaca_fuscata.k119_925451                            C 0 C 0
s Macaca_leonina.k141_3421209                                2704 2 +      3017 GA
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_mulatta.NC_041755.1                            196033234 2 + 196197964 GA
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11443340 2 +  11645122 GA
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_radiata.k141_1580474                                3096 2 -      3617 GA
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 13426 2 -     55006 GA
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43838463 2 +  43892939 GA
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                5685 2 -      5978 GA
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                700369 2 +    802869 TA
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43435133 2 -  43563597 GA
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4447959 2 -   4543643 GA
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            144866 2 +    252755 TA
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             34941 2 +     58827 TA
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36872177 2 +  64221397 ta
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       63168 2 -    234502 TA
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_146202             748 2 -      1999 TT
i Mellivora_capensis.MelCap_flattened_line_146202       C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               10268 2 +     15977 TA
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1045073 2 -  26018355 TG
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Microcebus_murinus.CM007691.1                          16508485 2 +  47401472 TA
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  30447 2 -     48017 TA
i Microgale_talazaci.MicTal_scaffold_34660              I 7 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               21451 2 -     32043 TA
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22818189 2 -  98408828 ta
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8208200 2 +  10048721 TA
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            32872 2 +     45743 TA
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        33788 2 +     34273 GA
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         9663 2 -    104932 TT
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     3883 2 +      8497 TA
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 145200 2 +    154973 TA
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                159957 2 +    265003 TA
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 3374 2 -      4346 TA
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  143052 2 -    168139 TT
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          17836 2 -    100666 TG
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70764682 2 +  92629107 TA
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75487718 2 +  98207768 TA
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67553906 2 +  89017189 TA
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74328898 2 +  97876770 TA
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              9456 2 +     98495 TA
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4422320 2 -  28371801 tt
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     88384 2 -    117718 TA
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               966161 2 +   8389877 TG
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5017850 2 +   6462685 TG
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3463747 2 -   3747815 TG
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         8941 2 +     66751 TG
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3833 2 -      8794 TA
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            116545 2 +    362372 ta
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               6163 2 +     48152 GA
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4483055 2 -  14209539 tt
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3949813 2 -   4490290 TA
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  48064 2 +     94413 TA
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_302224                             133 2 +      1516 GA
i Nomascus_annamensis.k141_302224                       C 0 I 40
s Nomascus_concolor.k141_49591                               1254 2 +      2014 GA
i Nomascus_concolor.k141_49591                          C 0 C 0
s Nomascus_gabriellae.k141_642452                             179 2 +      2851 GA
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             23094 2 -  18771707 GA
i Nomascus_siki_b.tarseq_80                         I 36 C 0
s Nomascus_siki_a.k141_595747                                   807 2 +      4512 GA
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                28500 2 +   3668941 tt
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Ochotona_princeps.JH802095.1                            4994312 2 -  23139505 TA
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3683881 2 +  10294119 ta
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             677700 2 -   3126709 tt
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1078502 2 +   1425656 TA
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         35797 2 +     78940 TA
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  123457 2 +    145789 TA
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  35219 2 +     62360 TA
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7223497 2 -   7562323 TA
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              43199 2 -     66828 TA
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141873967 2 + 163896628 TT
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      305834 2 -    505867 tt
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       37313 2 +     38679 TA
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18006755 2 -  38779656 TA
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134076064 2 - 275406953 TA
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      77278 2 +    140051 TA
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127572816 2 - 205426864 GA
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120149969 2 - 196562556 GA
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  32516 2 +    295523 TT
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3636250 2 +  18214204 tt
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5025897 2 -   6340057 tt
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1064925 2 -   1292953 TA
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188153915 2 - 188283584 GA
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            50127 2 +     76494 GA
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47511312 2 +  47705337 GA
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 65289 2 -    104429 GA
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  15080 2 -     29451 GA
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                35483 2 +     35859 GA
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113832 2 -    135482 TT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           3356 2 -     23713 TA
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            22654 2 -     27972 TA
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      41264 2 -     45160 TA
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4948401 2 -   8017169 TA
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    10572 2 -     36578 TA
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            120114 2 -    122454 TA
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1610110                          38928 2 +     39618 GA
i Piliocolobus_badius.k141_1610110                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                        304 2 -     17985 GA
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26738149 2 +  26888534 GA
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            95605 2 +    112873 GG
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             41798 2 -     61926 GA
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        23227 2 +     78826 GA
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              7178 2 -     15800 GA
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        10376 2 -     16101 GA
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          3685 2 +      9673 GA
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13472679 2 -  19735023 GA
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           11587 2 -     31692 GA
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           4180 2 +     21690 TA
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       21023 2 +     44506 GA
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        21233 2 +     67491 GA
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      11474 2 -     98129 GA
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     21079 2 +    147771 GA
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        21328 2 -     23762 GA
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          1795 2 -     55515 GA
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         21148 2 +    152463 GA
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      7908 2 +      8943 GA
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                         10868 2 +    134592 GA
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          21458 2 -     75465 GA
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              185360 2 -    373494 GA
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19805268 2 +  19899266 GA
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               3407 2 -     15069 GA
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              3541 2 +     14865 GA
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                76205 2 +     78963 TA
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6846747 2 +  12164890 TA
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    666060 2 -   2312742 TA
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         1890 2 +     11805 TA
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           41225 2 +     52369 TA
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         33614 2 -     44753 TA
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            15535 2 +     27322 TA
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       15174 2 -     53241 TA
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         37445 2 -     48185 TA
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           31819 2 +     77221 ta
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            2625 2 -     27784 TA
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        244414 2 -    344369 TT
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13244756 2 -  17261082 TA
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             602706 2 -   3946241 GA
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131532479 2 - 161321710 TT
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             27532 2 +     56732 GA
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6804023 2 +   6970761 GA
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             3417 2 +     18040 GA
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                14579 2 +     68503 TA
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13913769 2 +  90463843 GA
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1786566 2 +   2252614 GA
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           13969 2 -     14454 GA
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206375295 2 - 206558726 GA
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44852943 2 -  45163003 GA
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                18046 2 +    109198 TA
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       6381 2 +     12214 TA
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15670897 2 -  43202129 CA
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        2763 2 +     34089 CA
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              2704 2 -     60842 CA
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              2799 2 +     67014 CA
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              2777 2 +     60816 CA
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 2714 2 -     76454 CG
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   30135 1 -    114521 -A
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1527475                       25959 2 +     26421 GA
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       6419 2 +     20762 GA
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         40154 2 +     40653 GA
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                           10711 2 -     12194 GA
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     24133 2 -     27512 GA
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         33148 2 -     33692 GA
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   97994 2 -    120886 TA
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            16756 2 +    739146 TA
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17749401 2 -  27805282 TA
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2238259 2 +   2842873 ta
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             233165 2 -    276980 TT
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            25718 2 +     62062 TT
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189270633 2 + 218635234 TC
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        13086 2 -  13920577 GA
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               4552 2 -      6213 TA
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               13508 2 +     45698 TA
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      805494 2 +   1148477 TA
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  56154 2 +     99546 TA
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               24798 2 +     42269 GA
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               58114 2 +     65473 GA
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194005451 2 - 194193292 GA
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             37629 2 -     47444 TA
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  2929 2 +      6782 TA
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 I 1433
s Tonatia_saurophila.TonSau_scaffold_3334                  134635 2 -    259118 TA
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        24529 2 +     38948 GA
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   18256 2 -     32910 GA
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       24154 2 +     24652 GA
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      3032 2 -      3559 GA
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           40976 2 -     54611 GA
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       16977 2 +     17312 GA
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    24340 2 -     25040 GA
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          3001 2 +      3528 GA
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  49368 2 +     51589 GA
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       12544 2 +     14732 GA
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       3021 2 -     28054 GA
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44657816 2 -  44834318 GA
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        2825 2 +      3372 GA
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   3973 2 +     90398 CA
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16081343 2 +  31416278 TA
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2790712 2 -   3938065 TA
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    3235 2 +     13056 TA
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69312214 2 -  96451834 TA
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 25322 1 -     25548 -A
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6512972 2 +  28682327 tt
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  3587 2 -     20643 TA
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             23129 2 -     33872 TA
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1523436 2 -   2331223 TA
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                135907 2 -    281493 TT
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       125351 2 -    134049 TA
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        212435 2 -    227762 TT
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     13595 2 -     20485 TG
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           5711 2 -      8775 TA
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Chrysochloris_asiatica.ChrAsi_scaffold_141308              8820 2035 -     12508 T
e Mesoplodon_bidens.MesBid_scaffold_183284                   2166 255 +      2166 T
e Sapajus_macrocephalus.k141_966464                         18845 0 -     62485 C
e Sapajus_apella.ctg10                                   17339470 0 -  30362882 C
e Piliocolobus_kirkii.k141_557609                           19957 700 +     19957 T
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65667885 0 +  89412551 C
e Nycticebus_coucang.k141_2051882                            2265 0 +      6470 C
e Nycticebus_bengalensis.LG16                            65565537 0 -  95554990 C
e Macaca_tonkeana.k141_2870633                               2864 158 -     27140 T
e Macaca_nigra.k141_282495                                   2859 158 -     46448 T
e Macaca_maura.k141_251854                                  43912 158 -     79256 T

a score=0.000000
s hg38.chr4_GL000008v2_random                               10076 24 +    209709 TCTCATAGAAAT-A-ACATGG---------------------GAT--AA
s Acinonyx_jubatus.LLWD01000356.1                         2032140 13 +   3721120 TCTGATGgaaat-a-----------------------------------
i Acinonyx_jubatus.LLWD01000356.1                       C 0 I 7
s Acomys_cahirinus.AcoCah_scaffold_1625                    110815 23 -    189883 TCACATAGCTGT-G-A--GAG---------------------GACC-AT
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10655487 13 +  23371972 tgtgatagaaat-a-----------------------------------
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 I 7
s Ailurus_fulgens.LNAC01000003.1                          7092412 13 -  16596857 tctgatataaat-a-----------------------------------
i Ailurus_fulgens.LNAC01000003.1                        C 0 I 7
s Allactaga_bullata.AllBul_scaffold_70162                   11257 25 -     22067 TCTAATAAAAAC-A-ACAAAG---------------------GAT-GAA
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_3103707                  61089 25 +     61638 TCTGACAGAAAT-A-ACATGG---------------------GATC-AA
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        52901 25 +     53391 TCTGATAGAAAT-A-ACATGG---------------------GATC-AA
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         3626 25 +     72529 TCTGATAGAAAT-A-ACATGG---------------------GATC-AA
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          3201 25 +      3797 TCTGATAGAAAT-A-ACATGG---------------------GATC-AA
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             8347 25 -     18050 TCTGATAGAAAT-A-ACATGG---------------------GAT-TAA
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  9460 25 -     11521 TCTGATAGAAAT-A-ACATGG---------------------GAT-TAG
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              9024 25 -     21359 TCTGATAGAAAT-A-ACATGG---------------------GAT-TAA
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1029606                                 284 25 -      1200 TCTGATAGAAAT-A-ACATGG---------------------GAT-TAA
i Alouatta_juara.k141_1029606                           n 74 C 0
s Alouatta_macconnelli.k141_1331706                          8315 25 -     10438 TCTGATAGAAAT-A-ACATGG---------------------GAT-TAA
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            4971 25 +      7047 TCTGATAGAAAT-A-ACATGG---------------------GAT-TAA
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             8257 25 +     10410 TCTGATAGAAAT-A-ACATGG---------------------GAT-TAA
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            2060 25 -      4927 TCTGATAGAAAT-A-ACATGG---------------------GAT-TAA
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             4990 25 +      6429 TCTGATAGAAAT-A-ACATGG---------------------GAT-TAA
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3518925 13 +   4113121 TCTGATAGAAAT-T-----------------------------------
i Ammotragus_lervia.NIVO01013474.1                      C 0 I 6
s Anoura_caudifer.AnoCau_scaffold_422                      389070 11 -    631301 TCTGATAGAAA--------------------------------------
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 I 12
s Antilocapra_americana.AntAmePen_scaffold_42841            29506 13 +     33004 TCTGACAGAAAA-C-----------------------------------
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 I 6
s Aotus_azarae.k141_3170768                                 60713 22 +     78111 TCTGATAGAAGT-A-ACATGG---------------------GAT----
i Aotus_azarae.k141_3170768                             C 0 I 1
s Aotus_griseimembra.k141_3275623                            3654 22 +     22701 TCTGATAGAAAT-A-ACATGG---------------------GAT----
i Aotus_griseimembra.k141_3275623                       C 0 I 1
s Aotus_nancymaae.KZ196176.1                              5747611 22 +   9889416 TCTGATAGAAAT-A-ACATGG---------------------GAT----
i Aotus_nancymaae.KZ196176.1                            C 0 I 1
s Aotus_trivirgatus.k141_1740727                             4196 22 -    104377 TCTGATAGAAAT-A-ACATGG---------------------AAT----
i Aotus_trivirgatus.k141_1740727                        C 0 I 1
s Aotus_vociferans.k141_718647                               4202 22 +     23246 TCTGATAGAAAT-A-ACATGG---------------------AAT----
i Aotus_vociferans.k141_718647                          C 0 I 1
s Aplodontia_rufa.AprRuf_scaffold_156013                     2220 19 +      5067 CCTGAGAGAACC-A-GCAGAG----------------------------
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 I 6
s Arctocebus_calabarensis.k141_1161114                      16150 24 +     17483 TCCGATAGAAAT-A-ACATAG---------------------GGTC--A
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 7471 11 -     29036 TCTGATAGAAA--------------------------------------
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 I 12
s Ateles_geoffroyi_b.tarseq_2582                             9537446 25 +  39197703 TCTGATAGAAAT-A-ACATGG---------------------GAT-TAA
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             58730 25 +     85812 TCTGATAGAAAT-A-ACATGG---------------------GAT-TAA
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 9729 25 +     89302 TCTGATAGAAAT-A-ACATGG---------------------GAT-TAA
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             14234 25 -     58268 TCTGATAGAAAT-A-ACATGG---------------------GAT-TAA
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             62225 25 +    119057 TCTGATAGAAAT-A-ACATGG---------------------GAT-TAA
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               4194 25 -     25888 TCTGATAGAAAT-A-ACATGG---------------------GAT-TAA
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 4966 25 -     16375 TCTGATAGAAAT-A-ACATAG---------------------GAT-TGA
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              1285 25 +      2719 TCTGATAGAAAT-A-ACATAG---------------------GAT-TGA
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26378933 23 +  51448160 TCTGATAGAAAT-A-ATA--G---------------------AGTC-AA
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        4165 23 -     13118 TCTGATAGAAAT-A-ATA--G---------------------AGTC-AA
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   41987 13 -     72089 TCTGATAGAAAT-T-----------------------------------
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 I 6
s Bison_bison.KN264915.1                                  6558018 13 +   6870073 TCTGATAGAAAT-T-----------------------------------
i Bison_bison.KN264915.1                                C 0 I 6
s Bos_indicus.CM003021.1                                138138257 13 - 161108492 TCTGATAGAAAT-T-----------------------------------
i Bos_indicus.CM003021.1                                C 0 I 6
s Bos_mutus.JH883513.1                                     570631 13 -    998990 TCTGATAGAAAT-T-----------------------------------
i Bos_mutus.JH883513.1                                  C 0 I 6
s Bos_taurus.CM000177.6                                 136293990 13 - 158972876 TCTGATAGAAAT-T-----------------------------------
i Bos_taurus.CM000177.6                                 C 0 I 6
s Bubalus_bubalis.KI419065.1                              1229745 13 -   1914593 TCTGATAGAAAT-T-----------------------------------
i Bubalus_bubalis.KI419065.1                            C 0 I 6
s Cacajao_ayresi.k141_724503                               112086 22 -    171031 TCTGATAGAAAT-A-ACATGG---------------------GAT----
i Cacajao_ayresi.k141_724503                            C 0 I 1
s Cacajao_calvus.k141_96166                                 11112 22 +    125063 TCTGATAGAAAT-A-ACATGG---------------------GAT----
i Cacajao_calvus.k141_96166                             C 0 I 1
s Cacajao_hosomi.k141_303789                                13160 22 -    216513 TCTGATAGAAAT-A-ACATGG---------------------GAT----
i Cacajao_hosomi.k141_303789                            C 0 I 1
s Cacajao_melanocephalus.k141_1160263                        5700 22 -    134917 TCTGATAGAAAT-A-ACATGG---------------------GAT----
i Cacajao_melanocephalus.k141_1160263                   C 0 I 1
s Camelus_bactrianus.KN276303.1                           3218331 25 -   8989139 TCTGATAGGAAT-T-ATAGAG---------------------AATC-AA
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           396036 25 -  15254737 TCTGATAGGAAT-T-ATAGAG---------------------AATC-AA
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2971769 25 +   6889770 TCTGATAGGAAT-T-ATAGAG---------------------AATC-AA
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11516863 13 +  39901454 TCTGATAGAAAT-A-----------------------------------
i CanFam4.chr31                                         C 0 I 7
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   11881 13 +     87036 TCTGATAGAAAT-A-----------------------------------
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 I 7
s Canis_lupus_dingo.QKWQ01001993.1                       11263524 13 -  35597290 tctgatagaaat-a-----------------------------------
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 I 7
s Canis_lupus_familiaris.chr31                           11086053 13 +  39895921 tctgatagaaat-a-----------------------------------
i Canis_lupus_familiaris.chr31                          C 0 I 7
s Canis_lupus_orion.HG994411.1                           16453077 13 -  44759192 tctgatagaaat-a-----------------------------------
i Canis_lupus_orion.HG994411.1                          C 0 I 7
s Capra_aegagrus.CM003214.1                              21324001 13 + 157394656 TCTGATAGAAAT-T-----------------------------------
i Capra_aegagrus.CM003214.1                             C 0 I 6
s Capra_hircus.CM004562.1                               135705228 13 - 157403528 TCTGATAGAAAT-T-----------------------------------
i Capra_hircus.CM004562.1                               C 0 I 6
s Capromys_pilorides.CapPil_scaffold_979108                   320 24 -      1248 TCCAATGGAAAT-G-ACAG-G---------------------GATC-AA
i Capromys_pilorides.CapPil_scaffold_979108             C 0 I 1
s Carlito_syrichta.NW_007248099.1                          307317 25 +    345090 TCTGATAGAAAC-A-ACATAG---------------------GATC-AA
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               58268 11 +     67245 TCTGATAGAAA--------------------------------------
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 I 12
s Castor_canadensis.CasCan_scaffold_47037                   28769 25 +     33760 TGTGATAGAAAC-A-GCAGAG---------------------AATC-AA
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   157538 27 -    276539 TCTGAAAGAAATTA-ATATAA---------------------AATCCCG
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15784926 25 -  24422027 TTTGATAGAAAT-G-ACAGGG---------------------AATC-AA
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15796860 25 -  24440124 TCTGATAGAAAT-G-ACAGGG---------------------AATC-AA
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       175051 25 +    436027 TCTGATAGAAAT-G-ACAGGG---------------------AATC-AA
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18888944 25 -  29618158 TCTGATAGAAAT-A-ACATGG---------------------GAT-TAA
i Cebus_albifrons.Contig22                              C 0 I 1
s Cebus_olivaceus.k141_93739                                 6488 25 -     26817 TCTGATAGAAAT-A-ACATGG---------------------GAT-TAA
i Cebus_olivaceus.k141_93739                            C 0 I 1
s Cebus_unicolor.k141_239009                                10728 25 +     25043 TCTGATAGAAAT-A-ACATGG---------------------GAT-TAA
i Cebus_unicolor.k141_239009                            C 0 I 1
s Cephalopachus_bancanus.k141_702587                         6350 25 +     21754 TCTGATAGAAAC-A-ACATAG---------------------GATC-AA
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4362644 25 +   7569818 TCTGATAGAAAT-G-ACATAG---------------------AAT-GAG
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         2396 25 -      9338 TCTGATAGAAAT-G-ACATAG---------------------AAT-GAG
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6552885 25 +   6739814 TCTGATAGAAAT-A-ACATGG---------------------GATC-AA
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      54362 25 -     54931 TCTGATAGAAAT-A-ACATGG---------------------GATC-AA
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         19346 25 -     19697 TCTGATAGAAAT-A-ACATGG---------------------GATC-AA
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         56877 25 -    107033 TCTGATAGAAAT-A-ACATGG---------------------GATC-AA
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        3317 25 -      3853 TCTGACAGAAAT-A-ACATGG---------------------GATC-AA
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          27248 25 +     30494 TCTGACAGAAAT-A-ACATGG---------------------GATC-AA
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           3277 25 -      4022 TCTGACAGAAAT-A-ACATGG---------------------GATC-AA
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          3166 25 -      3505 TCTGACAGAAAT-A-ACATGG---------------------GATC-AA
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           21954 25 +     35983 TCTGATAGAAAT-A-ACATGG---------------------GATC-AA
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11988491 25 +  12117833 TCTGATAGAAAT-A-ACATGG---------------------GATC-AA
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46475244 25 +  46592721 TCTGATAGAAAT-A-ACATGG---------------------GATC-AA
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      33073 25 +     33420 TCTGATAGAAAT-A-ACATGG---------------------GATC-AA
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        3107 25 -      3443 TCTGACAGAAAT-A-ACATGG---------------------GATC-AA
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      4105 25 -      4669 TCTGACAGAAAT-A-ACATGG---------------------GATC-AA
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        3893 25 -      4411 TCTGATAGAAAT-A-ACATGG---------------------GATC-AA
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         3428 25 -      4205 TCTGACAGAAAT-A-ACATGG---------------------GATC-AA
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           1594 24 -      6963 tt-aaaaaaaat-a-atttaA---------------------AAA-AAT
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      n 0 C 0
s Cheirogaleus_major.k141_1157592                           57270 25 -     68416 TCTGATAGAAAT-A-ACATAG---------------------GAT-TGA
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            6312 25 +     13308 TCTGATAGAAAT-A-ACATAG---------------------GAT-TGA
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             3748 22 -     18223 TCTGATAGAAAT-A-ACATGG---------------------GAT----
i Cheracebus_lucifer.k141_619653                        C 0 I 1
s Cheracebus_lugens.k141_203936                             20771 22 +     25473 TCTGATAGAAAT-A-ACATGG---------------------GAT----
i Cheracebus_lugens.k141_203936                         C 0 I 1
s Cheracebus_regulus.k141_2128895                           39810 22 +     57117 TCTGATAGAAAT-A-ACATGG---------------------GAT----
i Cheracebus_regulus.k141_2128895                       C 0 I 1
s Cheracebus_torquatus.k141_315545                          44485 22 +     54541 ACTGATAGAAAT-A-ACATGG---------------------GAT----
i Cheracebus_torquatus.k141_315545                      C 0 I 1
s Chinchilla_lanigera.JH721867.1                         15960082 22 +  43084221 TCTGAGAGAAAT-G-ACAGAG---------------------GCT----
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         69295 22 +    196370 TCTGATAGAAAT-A-ACATGG---------------------GAT----
i Chiropotes_israelita.k141_1189915                     C 0 I 1
s Chiropotes_sagulatus.k141_773804                          13475 22 +     40510 TCTGATAGAAAT-A-ACATGG---------------------GAT----
i Chiropotes_sagulatus.k141_773804                      C 0 I 1
s Chlorocebus_aethiops.ctg22                             15136712 25 -  15256731 TCTGATAGAAAT-A-ACACGG---------------------GATC-AA
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      31758 25 -     53260 TCTGATAGAAAT-A-ACACGG---------------------GATC-AA
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101142207 25 + 101219884 TCTGATAGAAAT-A-ACACGG---------------------GATC-AA
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                15235 25 -     21363 TCTGATAGAAAT-A-AGACAG---------------------AATC-AA
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           760546 25 +    964067 TCTGATAGAAAT-A-AGacag---------------------aat-caa
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10887493 25 +  10971483 TCTGATAGAAAT-A-ACATGG---------------------GATC-AA
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147662246 25 + 156195979 TCTGATAGAAAT-A-ACATGG---------------------GATC-AA
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            14236 25 +     23629 TCTGATAGAAAT-A-ACATGG---------------------GATC-AA
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60611390 25 +  78930452 TTAAACAGAAat-a-gcaaag---------------------aat-taa
i Condylura_cristata.JH655880.1                         C 0 I 1
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         38380 25 -     40477 TTTAATAGAGAT-A-ATATAG---------------------AATC-AA
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 276709 18 -    399297 TCACACAGGAAT-A-AGAAA-----------------------------
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 I 2
s Cricetulus_griseus.LT883672.1                          53027336 20 +  72327488 TCACATGGAAAT-A-A--GAG---------------------GGT----
i Cricetulus_griseus.LT883672.1                         C 0 I 3
s Crocidura_indochinensis.CroInd_scaffold_38409             18447 19 -     19186 TCT--GAGATAT-A-ACACAG---------------------AA-----
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            50155 13 -     70449 TCTGATGGAAAT-A-----------------------------------
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 I 7
s Ctenodactylus_gundi.CteGun_scaffold_447                  206493 23 -    956709 TCTGAAAGAAAT-A-ACA--G---------------------GAT-GAA
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 29041 23 -     67205 TCTGATAGAAAG-C-ACAG-G---------------------TATC-A-
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 I 1
s Cuniculus_paca.CunPac_flattened_line_16637                16085 22 +     26546 TCTGATAGAAAT-G-ACAGGG---------------------GAT----
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 I 1
s Dasyprocta_punctata.DasPun_flattened_line_634             57187 22 -    236241 TCTGATAGAAAT-G-ACAGGG---------------------GTT----
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 I 1
s Dasypus_novemcinctus.JH568778.1                          182430 25 -   6883506 tttaaaaaaact-a-atttaa---------------------gaa-aaa
i Dasypus_novemcinctus.JH568778.1                       I 1443 C 0
s Daubentonia_madagascariensis.ctg11                     16843127 25 +  31942871 CCTGATAGAAAT-A-ACATAG---------------------GAT-TGA
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80035614 16 -  96802777 TCTGATAGAAAT-A-ATG-------------------------------
i Delphinapterus_leucas.KZ290064.1                      C 0 I 5
s Desmodus_rotundus.KZ672188.1                           18697578 10 -  18957592 tctgataa-aa--------------------------------------
i Desmodus_rotundus.KZ672188.1                          C 0 I 12
s Dicerorhinus_sumatrensis.PEKH010003161.1                 321291 25 +    993696 TCTGATAGAAAT-G-ACATAG---------------------AAT-GAG
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   1943 25 +    151128 TCTGATAGAAAT-G-ACATAG---------------------AAT-GAG
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   155970 25 +    228994 TCTGATGGAAAT-G-ACAGAG---------------------GAT-GAA
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3653691 24 +   4240102 TGTGTTAGA-AT-A-GCAGAA---------------------GGTC-AA
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 25254 24 +     28912 TGTGTTAGA-AT-A-GCAGAA---------------------GGTC-AA
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                34438 24 -     73477 TCTGACAGAAAG-G-ACAGGG---------------------AATC-A-
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22994036 26 -  44670279 tataaaaaaaac-aaatatac---------------------gATC-AA
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 10957 25 +     24177 TCtgataaaaac-a-atttag---------------------aat-cAA
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1490274 13 +   1727528 TCTGATAGAAAT-T-----------------------------------
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 I 6
s Ellobius_lutescens.LOEQ01003611.1                        237988 23 -    369425 TCACAGAGAAAT-A-A--GAG---------------------GGTC-AT
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           5004 23 -      7838 taacagagaaat-a-a--gag---------------------ggTC-AT
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85869940 13 +  99434291 tctgatagaaat-a-----------------------------------
i Enhydra_lutris.KZ291749.1                             C 0 I 7
s Eptesicus_fuscus.JH977687.1                             4702531 25 +   6522550 TCTGACAGAAAT-A-ACatgg---------------------aat-ata
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5851717 20 -   7175178 TCTGGTAGAAAT-A-ATGTAG---------------------A------
i Equus_asinus.JREZ01000062.1                           C 0 I 1
s Equus_caballus.CM000402.2                              13350220 20 +  41866177 TCTGATAGAAAT-A-ATGTAG---------------------A------
i Equus_caballus.CM000402.2                             C 0 I 1
s Equus_przewalskii.ATBW01073585.1                          11710 20 +     92910 TCTGATAGAAAT-A-ATGTAG---------------------A------
i Equus_przewalskii.ATBW01073585.1                      C 0 I 1
s Erinaceus_europaeus.JH835290.1                         11531267 21 +  16010500 GCTACTGTAAAC-A-ACAAAG---------------------AA-----
i Erinaceus_europaeus.JH835290.1                        C 0 I 1
s Erythrocebus_patas.Contig8                             48768890 25 -  48907691 TCTGATAGAAAT-A-ACATGG---------------------GATC-AA
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          313818 23 +    330699 TCTGATAGAAAT-A-ATA--G---------------------AGTC-AA
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             60272 23 +     89355 TCTGATAGAAAT-A-ATA--G---------------------AGTC-AA
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              3317 13 +     13586 TCTGATAGAAAT-A-----------------------------------
i Eulemur_albifrons.k141_715837                         C 0 I 7
s Eulemur_collaris.k141_311830                               3252 13 -      6809 TCTGATAGAAAT-A-----------------------------------
i Eulemur_collaris.k141_311830                          C 0 I 7
s Eulemur_coronatus.k141_3240342                             9727 13 +     36558 TCTGATAGAAAT-A-----------------------------------
i Eulemur_coronatus.k141_3240342                        C 0 I 7
s Eulemur_flavifrons.k141_903901                             6043 13 +     60246 TCTGATAGAAAT-A-----------------------------------
i Eulemur_flavifrons.k141_903901                        C 0 I 7
s Eulemur_fulvus.k141_653297                                 9525 13 +    109717 TCTGATAGAAAT-A-----------------------------------
i Eulemur_fulvus.k141_653297                            C 0 I 7
s Eulemur_macaco.k141_1341545                               13905 13 +     16540 TCTGATAGAAAT-A-----------------------------------
i Eulemur_macaco.k141_1341545                           C 0 I 7
s Eulemur_mongoz.k141_825972                                14180 13 +     27497 TCTGATAGAAAT-A-----------------------------------
i Eulemur_mongoz.k141_825972                            C 0 I 7
s Eulemur_rubriventer.k141_411740                           16637 13 +     26808 TCTGATAGAAAT-A-----------------------------------
i Eulemur_rubriventer.k141_411740                       C 0 I 7
s Eulemur_rufus.k141_1620292                                31370 13 +     46535 TCTGATAGAAAT-A-----------------------------------
i Eulemur_rufus.k141_1620292                            C 0 I 7
s Eulemur_sanfordi.k141_186399                              14093 13 -     29447 TCTGATAGAAAT-A-----------------------------------
i Eulemur_sanfordi.k141_186399                          C 0 I 7
s Felis_catus.CM001386.2                                129891116 13 - 159252932 TCTGATGgaaat-a-----------------------------------
i Felis_catus.CM001386.2                                C 0 I 7
s Felis_catus_fca126.CM031420.1                         129278188 13 - 158578461 tctgatggaaat-a-----------------------------------
i Felis_catus_fca126.CM031420.1                         C 0 I 7
s Felis_nigripes.FelNig_flattened_line_8080                 19323 13 +     52776 TCTGATGGAAAT-A-----------------------------------
i Felis_nigripes.FelNig_flattened_line_8080             C 0 I 7
s Fukomys_damarensis.KN123630.1                          13891033 22 -  19261668 TATGTA---AAG-G-ACAGTG---------------------GATC-CA
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     209225 25 -    847004 TCTGATAGAACT-A-ACATAG---------------------GGTC-GA
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           11604 25 -     43889 TCTGATAGAACT-A-ACATAG---------------------GGTC-GA
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           8672 25 +     27357 TCTGATAGAAAT-A-ACATGG---------------------GGT-AGA
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               154585 25 +    324696 TCTGATAGGAAT-A-ACATAG---------------------GATC-AA
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 I 1
s Giraffa_tippelskirchi.LVKQ01S012154.1                    180074 13 -    189561 TCTGATAGAAAT-T-----------------------------------
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 I 6
s Glis_glis.GliGli_scaffold_79770                           10984 25 -     18683 CCTGACAGAAGT-T-TCAGAG---------------------AATC-AA
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               3474 25 -     14630 TCTGATGGAAAT-A-ACATGG---------------------GATC-CA
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119650573 25 - 195582420 TCTGATGGAAAT-A-ACATGG---------------------GATC-CA
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   75721 25 +    118900 CCTGATAGAAAT-A-GCAGAG---------------------GATC-AA
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                         3877 13 +      3980 TCTGATAgaaat-a-----------------------------------
i Hapalemur_alaotrensis.k141_1198205                    C 0 I 1
s Hapalemur_gilberti.k141_97962                             26353 13 +     26611 TCTGATAgaaat-a-----------------------------------
i Hapalemur_gilberti.k141_97962                         C 0 I 1
s Hapalemur_griseus.k141_1387522                             3813 13 +     56096 TCTGATAgaaat-a-----------------------------------
i Hapalemur_griseus.k141_1387522                        C 0 I 1
s Hapalemur_meridionalis.k141_186231                        27090 13 -     42470 TCTGATAgaaat-a-----------------------------------
i Hapalemur_meridionalis.k141_186231                    C 0 I 1
s Hapalemur_occidentalis.k141_797938                        43684 13 -     54384 TCTGATAgaaat-a-----------------------------------
i Hapalemur_occidentalis.k141_797938                    C 0 I 1
s Helogale_parvula.HelPar_flattened_line_22962              15363 13 +     53719 TCTGATGGAAAT-A-----------------------------------
i Helogale_parvula.HelPar_flattened_line_22962          C 0 I 7
s Hemitragus_hylocrius.HemHyl_scaffold_16669                26272 13 -     91191 TCTGATAGAAAT-T-----------------------------------
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 I 6
s Heterocephalus_glaber.JH602058.1                        2549421 25 +  31725842 TCTGAAAAAATT-G-ACAGAC---------------------GATC-CA
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               56343 25 +     73687 TACAGTAGAAGT-A-AAACAG---------------------AAT-AAA
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              145849 16 +    277961 TCTGATAGAAAT-A-ATA-------------------------------
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 I 5
s Hipposideros_armiger.JXIK01001085.1                      277162 25 -    477199 TCTGATAGAAAT-G-ATATAG---------------------AACC-AA
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              6321 25 -      9143 TCTGACAGAAAT-G-ATATAG---------------------AACC-AA
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      2721 25 -   7690867 TCTGATAGAAAT-A-ACAGGG---------------------GAT-GGA
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 14458 13 -     67322 GCTGATGGAAAT-A-----------------------------------
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 I 7
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           17347 25 -    119109 TCTGATAGAAAT-G-ACAGGG---------------------AATC-AA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 I 3
s Hylobates_abbotti.k141_866183                               123 25 -      1027 TCTGATAGAAAT-A-ACAGGG---------------------GAT-GGA
i Hylobates_abbotti.k141_866183                         n 25 I 15
s Hylobates_agilis.k141_624065                                150 25 +      2112 TCTGATAGAAAT-A-ACAGGG---------------------GAT-GGA
i Hylobates_agilis.k141_624065                          C 0 C 0
s Hylobates_klossii.k141_466549                              9730 25 +     11537 TCTGATAGAAAT-A-ACAGCG---------------------GAT-GGA
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14620175 25 -  25970782 TCTGATAGAAAT-A-ACAGGG---------------------GAT-GGA
i Hylobates_pileatus_b.ContigUN                                T 2656 I 2656
s Hylobates_muelleri.k141_1389047                              87 25 -      2977 TCTGATAGAAAT-A-ACAGGG---------------------GAT-GGA
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             32218 25 -     60944 TCTGATAGAAAT-A-ACAGCG---------------------GAT-GGA
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     4473 25 +     22540 TCACATGGAAAT-G-GCAGAG---------------------GATC-CA
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7124344 45 +  13083262 tcTGATAGAACT-T-TACCTTTATATAAG-TCTAGTTGTATCAATC-AA
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_1884019                                   1558 25 -      2196 TCTAATAGAAAT-A-ACATAG---------------------GAT-TGA
i Indri_indri.k141_1884019                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               7602 16 +     17520 TCTGATAGAAAT-A-ATG-------------------------------
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 I 5
s Jaculus_jaculus.JH725517.1                              8564005 25 +  11848649 tctgagaaaaac-a-acaaaa---------------------gat-aaa
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               22432 23 +     37189 TCTGATAGAAAT-A-AGA--G---------------------AGTC-AA
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          48315 25 -    147782 TCTGATAGAAAT-A-ACATGG---------------------GAT-TAA
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   112327 25 -    115756 TCTGATAGAAAG-A-ACATGG---------------------AAT-ATA
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258405373 13 - 285822530 TCTGATAgaaat-a-----------------------------------
i Lemur_catta.scaffold_1                                C 0 I 1
s Lepilemur_ankaranensis.k141_884009                        22242 25 +     39228 TCTGATAGAAAT-A-ACATAA---------------------GAT-TGA
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            51617 25 +     63517 TCTGATAGAAAT-A-ACATAA---------------------GAT-TGA
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        76861 25 +    116806 TCTGATAGAAAT-A-ACGTAA---------------------GAT-TGG
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     29881 25 -     33031 TCTGATAGAAAT-A-ACATAA---------------------GAT-TGA
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3084157 13 -   3498232 tctgatAGAAAT-A-----------------------------------
i Leptonychotes_weddellii.KB714749.1                    C 0 I 7
s Lepus_americanus.LepAme_scaffold_62849                    11337 25 +     22452 TCTGATAAAACT-G-ATATAG---------------------CATC-AA
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            134767 16 +   3060487 TCTGATAGAAAT-A-ATG-------------------------------
i Lipotes_vexillifer.KE558548.1                         C 0 I 5
s Lophocebus_aterrimus.ctg55                             19245973 25 +  19376315 TCTGATAGAAAT-A-ACATGG---------------------GATC-AA
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            8968 25 +     84689 TCTGATAGAAAT-A-ACACAG---------------------GGTC-GA
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3776719 25 +   6799190 TCTGATAGAAAT-A-ACACAG---------------------GGTC-GA
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20590883 25 -  62548349 TATGATAGAAGC-A-ATATAG---------------------AATC-AA
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11085509 13 +  39895028 tctgatagaaat-a-----------------------------------
i Lycaon_pictus.CM007556.1                              C 0 I 7
s Macaca_arctoides.k141_2201161                             17649 25 +     74745 TCTGATAGAAAT-A-ACATGG---------------------GATC-AA
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12704159 25 +  12821369 TCTGATAGAAAT-A-ACATGG---------------------GATC-AA
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               6255 25 +      6569 TCTGATAGAAAT-A-ACATGG---------------------GATC-AA
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           44557 25 +     63263 TCTGATAGAACT-A-ACATGG---------------------GACC-AA
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_925451                                  565 25 +     10231 TCTGATAGAAAT-A-ACATGG---------------------GATC-AA
i Macaca_fuscata.k119_925451                            C 0 C 0
s Macaca_leonina.k141_3421209                                2706 25 +      3017 TCTGATAGAAAT-A-ACATGG---------------------GATC-AA
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_mulatta.NC_041755.1                            196033236 25 + 196197964 TCTGATAGAAAT-A-ACATGG---------------------GATC-AA
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11443342 25 +  11645122 TCTGATAGAAAT-A-ACATGG---------------------GATC-AA
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_radiata.k141_1580474                                3098 25 -      3617 TCTGATAGAAAT-A-ACATGG---------------------GATC-AA
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 13428 25 -     55006 TCTGATAGAAAT-A-ACATGG---------------------GATC-AA
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43838465 25 +  43892939 TCTGATAGAAAT-A-ACATGG---------------------GATC-AA
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                5687 25 -      5978 TCTGATAGAAAT-A-ACATGG---------------------GATC-AA
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                700371 25 +    802869 TCTGAGAGAAAT-A-ATATAG---------------------AATC-AC
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43435135 25 -  43563597 TCTGATAGAAAT-A-ACATGG---------------------GATC-AA
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4447961 25 -   4543643 TCTGATAGAAAT-A-ACATGG---------------------GATC-AA
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            144868 25 +    252755 TACGATAGAAAT-A-acatag---------------------aat-aaa
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             34943 25 +     58827 TATGATAGAAAT-A-acatag---------------------aat-aaa
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36872179 45 +  64221397 tcTGATAGAACT-T-TACCTTTATATAAG-TCTAGTTGTATCAATC-AA
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       63170 25 -    234502 TCTGATAGAAAC-G-ATACAG---------------------AATC-AC
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_146202             750 13 -      1999 TCTGATAGAAAT-A-----------------------------------
i Mellivora_capensis.MelCap_flattened_line_146202       C 0 I 7
s Meriones_unguiculatus.MerUng_scaffold_52233               10270 23 +     15977 TCACATAGAAGT-A-A--GAG---------------------GATC-AT
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1045075 23 -  26018355 TCACATAGAAAT-A-A--GAA---------------------GGTC-AT
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Microcebus_murinus.CM007691.1                          16508487 25 +  47401472 TCTGATAGAAAT-A-ACATAG---------------------GAT-TGA
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  30449 26 -     48017 TATAACAGAAAT-AAATATAC---------------------AATC-AA
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               21453 11 -     32043 CCTGATAAAAA--------------------------------------
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 I 12
s Microtus_ochrogaster.CM001673.1                        22818191 23 -  98408828 tcacagagaaat-a-a--gag---------------------gat-cAT
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8208202 25 +  10048721 TCTGACAGAGAT-A-ACATAG---------------------ACT-ATT
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            32874 25 +     45743 TCTGACAGAAAT-A-ACATAG---------------------ACT-ATT
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        33790 25 +     34273 TCTGATAGAAAT-A-ACATGG---------------------GATC-AA
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         9665 13 -    104932 TCTGATAGAAAT-A-----------------------------------
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 I 7
s Mirza_zaza.k141_226143                                     3885 25 +      8497 TCTGATAGAAAT-A-ACATAG---------------------GAT-TGA
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 145202 16 +    154973 TCTGATAGAAAT-A-ATG-------------------------------
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 I 5
s Mormoops_blainvillei.MorMeg_scaffold_2952                159959 11 +    265003 CCTGATAGAAA--------------------------------------
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 I 12
s Moschus_moschiferus.MosMos_scaffold_146101                 3376 13 -      4346 TCTGATAGAAAT-T-----------------------------------
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 I 6
s Mungos_mungo.MunMun_flattened_line_8729                  143054 13 -    168139 TCTGATGGAAAT-A-----------------------------------
i Mungos_mungo.MunMun_flattened_line_8729               C 0 I 7
s Murina_feae.MurFea_scaffold_2254                          17838 25 -    100666 TCTGACAGAAGT-A-ACATGG---------------------ACT-ATA
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70764684 22 +  92629107 TCACATCAAA-G-A-A--GAG---------------------GATC-AT
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75487720 22 +  98207768 TCACATCAAA-G-A-A--GAG---------------------GATC-AT
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67553908 22 +  89017189 TCACATCAAA-G-A-A--GAG---------------------GATC-AT
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74328900 22 +  97876770 TCACATCAAA-G-A-A--GAG---------------------GATC-AT
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              9458 25 +     98495 CCTGATGAAAAT-A-GCAGAG---------------------GATC-AA
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4422322 13 -  28371801 tctgatagaaat-a-----------------------------------
i Mustela_putorius.JH417978.1                           C 0 I 7
s Myocastor_coypus.MyoCoy_scaffold_3653                     88386 24 -    117718 TCCGATGGAAAC-G-ACAG-G---------------------GATC-AA
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 I 1
s Myotis_brandtii.KE161952.1                               966163 25 +   8389877 TCTGACAGAAAT-A-ACATAG---------------------ACT-ATA
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5017852 25 +   6462685 TCTGACAGAAAT-A-ACATGG---------------------ACT-ATA
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3463749 25 -   3747815 TCTGACAGAAAT-G-ACATGG---------------------ACT-ATA
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         8943 25 +     66751 TCTGACAAAAAT-A-ACATGG---------------------ACT-ATA
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3835 25 -      8794 TCAGATAGAAAT-A-AGATAG---------------------AATC-AA
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            116547 19 +    362372 aaaaatgtaaag-t-aaaaag----------------------------
i Nannospalax_galili.KL201303.1                         C 0 I 1
s Nasalis_larvatus.k141_153429                               6165 22 +     48152 TCTGATAGAAAT-A-ACATGG---------------------GAT----
i Nasalis_larvatus.k141_153429                          C 0 I 3
s Neomonachus_schauinslandi.NINY01007774.1                4483057 13 -  14209539 tctgatAGAAAT-A-----------------------------------
i Neomonachus_schauinslandi.NINY01007774.1              C 0 I 7
s Neophocaena_asiaeorientalis.KZ688543.1                  3949815 16 -   4490290 TCTGATAGAAAT-A-ATG-------------------------------
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 I 5
s Noctilio_leporinus.NocLep_scaffold_12062                  48066 11 +     94413 TCTAATAGAAC--------------------------------------
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 I 12
s Nomascus_annamensis.k141_1439838                           1033 25 +      3718 TCTGATAGAAAT-A-ACAGGG---------------------GAT-GGA
i Nomascus_annamensis.k141_1439838                      I 134 C 0
s Nomascus_concolor.k141_49591                               1256 25 +      2014 TCTGATAGAAAT-A-ACAGGG---------------------GAT-GGA
i Nomascus_concolor.k141_49591                          C 0 C 0
s Nomascus_gabriellae.k141_642452                             181 25 +      2851 TCTGATAGAAAT-A-ACAGGG---------------------GAT-GGA
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             23096 25 -  18771707 TCTGATAGAAAT-A-ACAGGG---------------------GAT-GGA
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                   809 25 +      4512 TCTGATAGAAAT-A-ACAGGG---------------------GAT-GGA
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                28502 13 +   3668941 tctgatagaaat-a-----------------------------------
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 I 7
s Ochotona_princeps.JH802095.1                            4994314 25 -  23139505 TTTGATAAAAGT-A-ATAGAG---------------------TTTC-AA
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3683883 24 +  10294119 TCTAATGGAAAG-C-ACTG-G---------------------GCTC-AA
i Octodon_degus.JH651621.1                              C 0 I 1
s Odobenus_rosmarus.KB229369.1                             677702 13 -   3126709 tctgaTAGAAAT-A-----------------------------------
i Odobenus_rosmarus.KB229369.1                          C 0 I 7
s Odocoileus_virginianus.KZ101650.1                       1078504 13 +   1425656 TCTGATAGAAAT-T-----------------------------------
i Odocoileus_virginianus.KZ101650.1                     C 0 I 6
s Okapia_johnstoni.LVCL01S0017931.1                         35799 13 +     78940 TCTGATAGAAAT-T-----------------------------------
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 I 6
s Ondatra_zibethicus.OndZib_scaffold_6821                  123459 23 +    145789 TCACAGAGAAAT-A-A--GAG---------------------GGTC-AT
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  35221 23 +     62360 TCACACAGAAAC-A-A--GAG---------------------GGTC-AT
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7223499 16 -   7562323 TCTGATAGAAAT-A-ATG-------------------------------
i Orcinus_orca.KB316965.1                               C 0 I 5
s Orycteropus_afer.OryAfe_flattened_line_13509              43201 25 -     66828 TATGTTGTGAAT-A-ATATAG---------------------AATC-AA
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141873969 25 + 163896628 TCTGATAAAACT-G-ATACAG---------------------CATC-AA
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      305836 13 -    505867 tctgatagaaat-a-----------------------------------
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 I 7
s Otolemur_crassicaudatus.k141_321880                       37315 25 +     38679 TCTGATAGAAAT-A-ACATAG---------------------GGTC-GA
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18006757 25 -  38779656 TCTGATAGAAAT-A-ACATAG---------------------GATC-GA
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134076066 13 - 275406953 TCTGATAGAAAT-T-----------------------------------
i Ovis_aries.CM001582.2                                 C 0 I 6
s Ovis_canadensis.OviCan_scaffold_6251                      77280 13 +    140051 TCTGATAGAAAT-T-----------------------------------
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 I 6
s Pan_paniscus.CM003386.1                               127572818 25 - 205426864 TCTGATAGAAAT-A-ACATGG---------------------GATC-CA
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120149971 25 - 196562556 TCTGATAGAAAT-A-ACATGG---------------------GATC-CA
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  32518 13 +    295523 TCTGATGGAAAT-A-----------------------------------
i Panthera_onca.PanOnc_flattened_line_1615              C 0 I 7
s Panthera_pardus.KV860323.1                              3636252 13 +  18214204 tctgatggaaat-a-----------------------------------
i Panthera_pardus.KV860323.1                            C 0 I 7
s Panthera_tigris.KE721879.1                              5025899 13 -   6340057 tctgatggaaat-a-----------------------------------
i Panthera_tigris.KE721879.1                            C 0 I 7
s Pantholops_hodgsonii.KE114631.1                         1064927 13 -   1292953 TCTGATAGAAAT-T-----------------------------------
i Pantholops_hodgsonii.KE114631.1                       C 0 I 6
s Papio_anubis.CM001492.2                               188153917 25 - 188283584 TCTGATAGAAAT-A-ACATGG---------------------GATC-AA
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            50129 25 +     76494 TCTGATAGAAAT-A-ACATGG---------------------GATC-AA
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47511314 25 +  47705337 TCTGATAGAAAT-A-ACATGG---------------------GATC-AA
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 65291 25 -    104429 TCTGATAGAAAT-A-ACATGG---------------------GATC-AA
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  15082 25 -     29451 TCTGATAGAAAT-A-ACATGG---------------------GATC-AA
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                35485 25 +     35859 TCTGATAGAAAT-A-ACATGG---------------------GATC-AA
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113834 13 -    135482 TCTTATAGAAAT-A-----------------------------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 I 7
s Perodicticus_ibeanus.k141_117958                           3358 25 -     23713 TCTGATAGAAAT-A-ACATAG---------------------GGTC-AA
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            22656 25 -     27972 TCTGATAGAAAT-A-ACATAG---------------------GGTC-AA
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      41266  8 -     45160 TGTGATAG-----------------------------------------
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 I 8
s Peromyscus_maniculatus.KI615518.1                       4948403 23 -   8017169 TCACATAGAAGT-A-A--GAG---------------------TGTC-AT
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    10574 23 -     36578 TCTGATAGAAAT-G-AGA--G---------------------AGCC-AA
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            120116 16 -    122454 TCTGATAGAAAT-A-ATG-------------------------------
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 I 5
s Piliocolobus_badius.k141_1610110                          38930 25 +     39618 TCTGATAGAAAT-A-ACATGG---------------------GATC-AA
i Piliocolobus_badius.k141_1610110                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                        306 25 -     17985 TCTGATAGAAAT-A-ACATGG---------------------GATC-AA
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26738151 25 +  26888534 TCTGATAGAAAT-A-ACATGG---------------------GATC-AA
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            95607 25 +    112873 TCTGACAGAAAT-A-ACATGG---------------------AAT-ATA
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             41800 22 -     61926 TCTGATAGAAAT-A-ACATGG---------------------GAT----
i Pithecia_albicans.k141_991845                         C 0 I 1
s Pithecia_chrysocephala.k141_159118                        23229 22 +     78826 TCTGATAGAAAT-A-ACATGG---------------------GAT----
i Pithecia_chrysocephala.k141_159118                    C 0 I 1
s Pithecia_hirsuta.k141_1152968                              7180 22 -     15800 TCTGATAGAAAT-A-ACATGG---------------------GAT----
i Pithecia_hirsuta.k141_1152968                         C 0 I 1
s Pithecia_mittermeieri.k141_2119203                        10378 22 -     16101 TCTGATAGAAAT-A-ACATGG---------------------GAT----
i Pithecia_mittermeieri.k141_2119203                    C 0 I 1
s Pithecia_pissinattii.k141_1102319                          3687 22 +      9673 TCTGATAGAAAT-A-ACATGG---------------------GAT----
i Pithecia_pissinattii.k141_1102319                     C 0 I 1
s Pithecia_pithecia.tarseq_313                           13472681 22 -  19735023 TCTGATAGAAAT-A-ACATGG---------------------GAT----
i Pithecia_pithecia.tarseq_313                          C 0 I 1
s Pithecia_vanzolinii.k141_831006                           11589 22 -     31692 TCTGATAGAAAT-A-ACATGG---------------------GAT----
i Pithecia_vanzolinii.k141_831006                       C 0 I 1
s Platanista_gangetica.PlaMin_flattened_line_72990           4182 16 +     21690 TCTGATAGAAAT-A-ATA-------------------------------
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 I 7
s Plecturocebus_bernhardi.k141_959214                       21025 22 +     44506 TCTGACAGAAAT-A-ACATGG---------------------GAT----
i Plecturocebus_bernhardi.k141_959214                   C 0 I 1
s Plecturocebus_brunneus.k141_498086                        21235 22 +     67491 TCTGATAGAAAT-A-ACATGG---------------------GAT----
i Plecturocebus_brunneus.k141_498086                    C 0 I 1
s Plecturocebus_caligatus.k141_2539816                      11476  9 -     98129 TCTGATAGA----------------------------------------
i Plecturocebus_caligatus.k141_2539816                  C 0 I 14
s Plecturocebus_cinerascens.k141_744510                     21081 22 +    147771 TCTGATAGAAAT-A-ACATGG---------------------GAT----
i Plecturocebus_cinerascens.k141_744510                 C 0 I 1
s Plecturocebus_cupreus.k141_1223294                        21330 22 -     23762 TCTGATAGAAAT-A-ACATGG---------------------GAT----
i Plecturocebus_cupreus.k141_1223294                    C 0 I 1
s Plecturocebus_dubius.k141_3565563                          1797  9 -     55515 TCTGATAGA----------------------------------------
i Plecturocebus_dubius.k141_3565563                     C 0 I 14
s Plecturocebus_grovesi.k141_242819                         21150 22 +    152463 TCTGATAGAAAT-A-ACATGG---------------------GAT----
i Plecturocebus_grovesi.k141_242819                     C 0 I 1
s Plecturocebus_hoffmannsi.k141_1595076                      7910 22 +      8943 TCTGATAGAAAT-A-ACATGG---------------------GAT----
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 I 1
s Plecturocebus_miltoni.k141_841561                         10870 22 +    134592 TCTGATAGAAAT-A-ACATGG---------------------GAT----
i Plecturocebus_miltoni.k141_841561                     C 0 I 1
s Plecturocebus_moloch.k141_890597                          21460 22 -     75465 TCTGATAGAAAT-A-ACATGG---------------------GAT----
i Plecturocebus_moloch.k141_890597                      C 0 I 1
s Pongo_abelii.NDHI03003816.1                              185362 25 -    373494 TCTGATAGAAAT-A-CCGTGG---------------------GATC-CA
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19805270 25 +  19899266 TCTGATAGAAAT-A-ACGTGG---------------------GATC-CA
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               3409 25 -     15069 TCTGATAGAAAT-A-ACATGG---------------------GATC-AA
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              3543 25 +     14865 TCTGATAGAAAT-A-ACATGG---------------------GATC-AA
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                76207 25 +     78963 TACAGTAGAAGT-A-AAACAG---------------------AAT-AAA
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6846749 13 +  12164890 TCTGATAGAAAt-a-----------------------------------
i Prolemur_simus.MPIZ01000048.1                         C 0 I 1
s Propithecus_coquerelli.NW_012147997.1                    666062 25 -   2312742 TCTGATAGAAAT-A-ACATAG---------------------GAT-TGA
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         1892 25 +     11805 TCTGATAGAAAT-A-ACATAG---------------------GAT-TCA
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           41227 25 +     52369 TCTGATAGAAAT-A-ACATAG---------------------GAT-TGA
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         33616 25 -     44753 TCTGATAGAAAT-A-ACATAG---------------------GAT-TGA
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            15537 25 +     27322 TCTGATAGAAAT-A-ACATAG---------------------GAT-TGA
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       15176 25 -     53241 TCTGATAGAAAT-A-ACATAG---------------------GAT-TGA
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         37447 25 -     48185 TCTGATAGAAAT-A-ACATAG---------------------GAT-TGA
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           31821 23 +     77221 tcACATAGAAGT-A-A--GAG---------------------GATC-AT
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            2627 11 -     27784 TCGGATAGAAA--------------------------------------
i Pteronotus_parnellii.KE867983.1                       C 0 I 12
s Pteronura_brasiliensis.PteBra_flattened_line_1343        244416 13 -    344369 TCTGATAGAAAT-A-----------------------------------
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 I 7
s Pteropus_alecto.KB031157.1                             13244758 25 -  17261082 TCTGATAGAAAT-A-ATATAG---------------------AATC-AA
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             602708 25 -   3946241 TCTGATAGAAAT-A-ATATAG---------------------AATC-AA
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131532481 13 - 161321710 TCTGATGgaaat-a-----------------------------------
i Puma_concolor.QAVW01000427.1                          C 0 I 7
s Pygathrix_cinerea.k141_374971                             27534 25 +     56732 TCTGATAGAAAT-A-ACATGG---------------------GATC-CA
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6804025 25 +   6970761 TCTGATAGAAAT-A-ACATGG---------------------GATC-CA
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             3419 25 +     18040 TCTGATAGAAAT-A-ACATGG---------------------GATC-CA
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                14581 13 +     68503 TCTGATAGAAAT-T-----------------------------------
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 I 6
s Rattus_norvegicus.chr11                                13913771 22 +  90463843 TCACATCCAT-G-A-A--GAG---------------------GGTC-AT
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1786568 25 +   2252614 TCTGATAGAAAT-A-GTATAG---------------------AACC-AA
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           13971 25 -     14454 TCTGATAGAAAT-A-ACATGG---------------------GATC-AA
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206375297 25 - 206558726 TCTGATAGAAAT-A-ACATGG---------------------GATC-AA
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44852945 25 -  45163003 TCTGATAGAAAT-A-ACATGG---------------------GATC-AA
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                18048 25 +    109198 TCTGATTGAAAT-A-ATATAG---------------------AATC-AA
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       6383 13 +     12214 TCTGATGGAAAT-T-----------------------------------
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 I 6
s Saimiri_boliviensis.NW_024100938.1                     15670899 25 -  43202129 TCTGATAGAAAT-A-AAATGG---------------------GAT-TAA
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        2765 25 +     34089 TCTGATAGAAAT-A-AAATGG---------------------GAT-TAA
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              2706 25 -     60842 TCTGATAGAAAT-A-AAATGG---------------------GAT-TAA
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              2801 25 +     67014 TCTGATAGAAAT-A-AAATGG---------------------GAT-TAA
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              2779 25 +     60816 TCTGATAGAAAT-A-AAATGG---------------------GAT-TAA
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 2716 25 -     76454 TCTGATAGAAAT-A-AAATGG---------------------GAT-TAA
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17339470 24 -  30362882 -CTGATAGAAAT-A-ACATGG---------------------GAT-TAA
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         18845 24 -     62485 -CTGATAGAAAT-A-ACATGG---------------------GAT-TAA
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   30136 25 -    114521 TTAAATCAAAAT-A-GCAAAG---------------------AATC-AA
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 I 1
s Semnopithecus_entellus.k141_1527475                       25961 25 +     26421 TCTGATAGAAAT-A-ACATGG---------------------GATC-AA
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       6421 25 +     20762 TCTGATAGAAAT-A-ACATGG---------------------GATC-AA
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         40156 25 +     40653 TCTGATAGAAAT-A-ACATGG---------------------GATC-AA
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                           10713 25 -     12194 TCTGATAGAAAT-A-ACATGG---------------------GATC-AA
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     24135 25 -     27512 TCTGATAGAAAT-A-ACATGG---------------------GATC-AA
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         33150 25 -     33692 TCTGATAGAAAT-A-ACATGG---------------------GATC-AA
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   97996 23 -    120886 TCACATAGAAAT-A-A--GAG---------------------AGT-TAC
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            16758 25 +    739146 CCTAATAGAAAT-T-ACAAAG---------------------AATC-AA
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17749403 21 -  27805282 TCTAAGAGATAT-A-ACACAG---------------------AA-----
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2238261 45 +   2842873 tcTGATAGAACT-T-TACCTTTATATAAG-TCTAGTTGTATCAATC-AA
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             233167 13 -    276980 TCTGATAGAAAT-A-----------------------------------
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 I 7
s Suricata_suricatta.SurSur_flattened_line_20339            25720 13 +     62062 TCTGATGGAAAT-A-----------------------------------
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 I 7
s Sus_scrofa.CM000824.4                                 189270635 27 + 218635234 TCTGAAAGAAATTA-ATGTAG---------------------AATCTCA
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        13088 25 -  13920577 TCTGATAGAAAT-A-ACAGGG---------------------GAT-GGA
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               4554 25 -      6213 TCTGACAGAAAT-A-CTATAG---------------------AAC-ATA
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               13510 25 +     45698 TCAGATAGAAAT-A-AGATAG---------------------AATC-AA
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      805496 25 +   1148477 TCTGATAGAAAT-A-GCATAG---------------------AAT-GAG
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  56156 25 +     99546 TCTGATAGAAAT-A-GCATAG---------------------AAT-GAG
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               24800 25 +     42269 TCTGATAGAAAC-A-ACATAG---------------------GATC-AA
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               58116 25 +     65473 TCTGATAGAAAC-A-ACATAG---------------------GATC-AA
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194005453 25 - 194193292 TCTGATAGAAAT-A-ACATGG---------------------GATC-AA
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             37631 23 -     47444 TCTGATAGAAAT-G-ACA--A---------------------GATC-AA
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  4364 23 +      6782 ttcaaaaataat-t-tttt-----------------------aaa-gat
i Tolypeutes_matacus.TolMat_scaffold_269431             I 1433 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  134637 11 -    259118 TCTGATAGAAA--------------------------------------
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 I 12
s Trachypithecus_auratus.k141_738098                        24531 25 +     38948 TCTGATAGAAAT-A-ACATGG---------------------GATC-AA
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   18258 25 -     32910 TCTGATAGAAAT-A-ACATGG---------------------GATC-AA
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       24156 25 +     24652 TCTGATAGAAAT-A-ACATGG---------------------GATC-AA
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      3034 25 -      3559 TCTGATAGAAAT-A-ACATGG---------------------GATC-AA
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           40978 25 -     54611 TCTGATAGAAAT-A-ACATGG---------------------GATC-AA
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       16979 25 +     17312 TCTGATAGAAAT-A-ACATGG---------------------GATC-AA
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    24342 25 -     25040 TCTGATAGAAAT-A-ACATGG---------------------GATC-AA
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          3003 25 +      3528 TCTGATAGAAAT-A-ACATGG---------------------GATC-AA
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  49370 25 +     51589 TCTGATAGAAAT-A-ACATGG---------------------GATC-AA
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       12546 25 +     14732 TCTGATAGAAAT-A-ACATGG---------------------GATC-AA
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       3023 25 -     28054 TCTGATAGAAAT-A-ACATGG---------------------GATC-AA
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44657818 25 -  44834318 TCTGATAGAAAT-A-ACATGG---------------------GATC-AA
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        2827 25 +      3372 TCTGATAGAAAT-A-ACATGG---------------------GATC-AA
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   3975 13 +     90398 TCTAACAGAAAT-G-----------------------------------
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 I 6
s Trichechus_manatus.JH594618.1                          16081345 25 +  31416278 TCTGATAGAAGG-A-ATATAG---------------------AATC-AA
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2790714 25 -   3938065 TATGGGAGAAAT-A-AGAGAG---------------------GATC-AA
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    3237 25 +     13056 TATGGGAGAAAT-A-ATAGAG---------------------GATC-AA
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69312216 16 -  96451834 TCTGATAGAAAT-A-ATG-------------------------------
i Tursiops_truncatus.MRVK01000923.1                     C 0 I 5
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 25323 15 -     25548 TTAAATAGAAAA-A-GC--------------------------------
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 T 570
s Ursus_maritimus.KK498671.1                              6512974 13 +  28682327 tgtgatagaaat-a-----------------------------------
i Ursus_maritimus.KK498671.1                            C 0 I 7
s Varecia_rubra.k141_432109                                  3589 13 -     20643 TCTGATAGAAAT-A-----------------------------------
i Varecia_rubra.k141_432109                             C 0 I 7
s Varecia_variegata.k141_775891                             23131 13 -     33872 TCTGATAGAAAT-A-----------------------------------
i Varecia_variegata.k141_775891                         C 0 I 7
s Vicugna_pacos.KN269600.1                                1523438 25 -   2331223 TCTGATAGAAAT-A-ATATAG---------------------GATC-AA
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                135909 13 -    281493 TCTGATAGAAAT-A-----------------------------------
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 I 7
s Xerus_inauris.XerIna_scaffold_7898                       125353 45 -    134049 TCTGATACAACT-A-GAATTGTAT-GAAGGTAGAGTTCTAACAATC-AA
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        212437 13 -    227762 TCTGATAGAAAT-A-----------------------------------
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 I 7
s Zapus_hudsonius.ZapHud_scaffold_64392                     13597 18 -     20485 TCCGATGGAAGC-A-TCAGG-----------------------------
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 I 1
s Ziphius_cavirostris.ZipCav_flattened_line_127025           5713 16 -      8775 TCTGATAGAAAT-A-ACA-------------------------------
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 I 5
e Chrysochloris_asiatica.ChrAsi_scaffold_141308              8820 2035 -     12508 T
e Mesoplodon_bidens.MesBid_scaffold_183284                   2166 255 +      2166 T
e Elephantulus_edwardii.JH947210.1                        7805914 1445 +  15467074 T
e Piliocolobus_kirkii.k141_557609                           19957 700 +     19957 T
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65667885  0 +  89412551 C
e Nycticebus_coucang.k141_2051882                            2265  0 +      6470 C
e Nycticebus_bengalensis.LG16                            65565537  0 -  95554990 C
e Macaca_tonkeana.k141_2870633                               2864 158 -     27140 T
e Macaca_nigra.k141_282495                                   2859 158 -     46448 T
e Macaca_maura.k141_251854                                  43912 158 -     79256 T

a score=0.000000
s hg38.chr4_GL000008v2_random                               10100 15 +    209709 A----AA--GA---GTTctgaagg
s Acinonyx_jubatus.LLWD01000356.1                         2032160  9 +   3721120 a----aa--ga---atcc------
i Acinonyx_jubatus.LLWD01000356.1                       I 7 T 587
s Acomys_cahirinus.AcoCah_scaffold_1625                    110838 14 -    189883 A-----A--TA---GTTCtaaggg
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10655507  9 +  23371972 a----aa--ga---atCC------
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 7 T 614
s Ailurus_fulgens.LNAC01000003.1                          7092432  9 -  16596857 a----aa--ga---ATCC------
i Ailurus_fulgens.LNAC01000003.1                        I 7 T 814
s Allactaga_bullata.AllBul_scaffold_70162                   11282 15 -     22067 A----AG--AA---GTTCtgaagg
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_3103707                  61114 15 +     61638 A----AA--GA---GTTCTGAAGG
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        52926 15 +     53391 A----AA--GA---GTTCTGAAGG
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         3651 15 +     72529 A----AA--GA---GTTCTGAAGG
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          3226 15 +      3797 A----AA--GA---GTTCTGAAGG
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             8372 15 -     18050 A----AA--GA---GTTCTGAAGA
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  9485 15 -     11521 A----AA--GA---GTTCtgaaga
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              9049 15 -     21359 A----AA--GA---GTTCTGAAGA
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1029606                                 309 15 -      1200 A----AA--GA---GTTCTGAAGA
i Alouatta_juara.k141_1029606                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          8340 15 -     10438 A----AA--GA---CTTCTGAAGA
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            4996 15 +      7047 A----AA--GA---GTTCTGAAGA
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             8282 15 +     10410 A----AA--GA---GTTCTGAAGA
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            2085 15 -      4927 A----AA--GA---CTTCTGAAGA
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             5015 15 +      6429 A----AA--GA---GTTCTGAAGA
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3518944  9 +   4113121 A----AA--GA---GTCC------
i Ammotragus_lervia.NIVO01013474.1                      I 6 T 602
s Anoura_caudifer.AnoCau_scaffold_422                      389093  2 -    631301 A----A------------------
i Anoura_caudifer.AnoCau_scaffold_422                   I 12 T 570
s Antilocapra_americana.AntAmePen_scaffold_42841            29525  9 +     33004 A----AG--GA---GTCC------
i Antilocapra_americana.AntAmePen_scaffold_42841        I 6 T 583
s Aotus_azarae.k141_3170768                                 60736 17 +     78111 A----AAAAGA---GTTCTGAAGA
i Aotus_azarae.k141_3170768                             I 1 C 0
s Aotus_griseimembra.k141_3275623                            3677 17 +     22701 A----AAAAGA---GTTCTGAAGA
i Aotus_griseimembra.k141_3275623                       I 1 C 0
s Aotus_nancymaae.KZ196176.1                              5747634 17 +   9889416 A----AAAAGA---GTTCTGAAGA
i Aotus_nancymaae.KZ196176.1                            I 1 C 0
s Aotus_trivirgatus.k141_1740727                             4219 17 -    104377 A----AAAAGA---GTTCTGAAGA
i Aotus_trivirgatus.k141_1740727                        I 1 C 0
s Aotus_vociferans.k141_718647                               4225 17 +     23246 A----AAAAGA---GTTCTGAAGA
i Aotus_vociferans.k141_718647                          I 1 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     2245 13 +      5067 A----A----G---TTTCTGAAGG
i Aplodontia_rufa.AprRuf_scaffold_156013                I 6 C 0
s Arctocebus_calabarensis.k141_1161114                      16174 15 +     17483 A----AA--GA---GTTCtgatga
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 7494  2 -     29036 C----A------------------
i Artibeus_jamaicensis.ArtJam_scaffold_41619            I 12 T 576
s Ateles_geoffroyi_b.tarseq_2582                             9537471 15 +  39197703 A----AA--GA---GTTCTGAAGA
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             58755 15 +     85812 A----AA--GA---GTTCTGAAGA
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 9754 15 +     89302 A----AA--GA---GTTCTGAAGA
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             14259 15 -     58268 A----AA--GA---GTTCTGAAGA
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             62250 15 +    119057 A----AA--GA---GTTCTGAAGA
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               4219 15 -     25888 A----AA--GA---GTTCTGAAGA
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 4991 15 -     16375 A----AA--GA---GTTCtgacgg
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              1310 15 +      2719 A----AA--GA---GTTCtgacgg
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26378956  9 +  51448160 A----AA--GA---GTCC------
i Balaenoptera_acutorostrata.KI537095.1                 C 0 T 597
s Balaenoptera_bonaerensis.DF502048.1                        4188  9 -     13118 A----AA--GA---GTCC------
i Balaenoptera_bonaerensis.DF502048.1                   C 0 T 598
s Beatragus_hunteri.BeaHun_scaffold_21644                   42006  9 -     72089 A----AA--GA---GTCC------
i Beatragus_hunteri.BeaHun_scaffold_21644               I 6 T 569
s Bison_bison.KN264915.1                                  6558037  9 +   6870073 T----AG--GA---GTCC------
i Bison_bison.KN264915.1                                I 6 T 589
s Bos_indicus.CM003021.1                                138138276  9 - 161108492 A----AG--GA---GTCC------
i Bos_indicus.CM003021.1                                I 6 T 589
s Bos_mutus.JH883513.1                                     570650  9 -    998990 A----AG--GA---GTCC------
i Bos_mutus.JH883513.1                                  I 6 T 589
s Bos_taurus.CM000177.6                                 136294009  9 - 158972876 A----AG--GA---GTCC------
i Bos_taurus.CM000177.6                                 I 6 T 589
s Bubalus_bubalis.KI419065.1                              1229764  9 -   1914593 A----AG--GA---GTCT------
i Bubalus_bubalis.KI419065.1                            I 6 T 588
s Cacajao_ayresi.k141_724503                               112109 15 -    171031 A----AA--GA---GTTCTGAAGA
i Cacajao_ayresi.k141_724503                            I 1 C 0
s Cacajao_calvus.k141_96166                                 11135 15 +    125063 A----AA--GA---GTTCTGAAGA
i Cacajao_calvus.k141_96166                             I 1 C 0
s Cacajao_hosomi.k141_303789                                13183 15 -    216513 A----AA--GA---GTTCTGAAGA
i Cacajao_hosomi.k141_303789                            I 1 C 0
s Cacajao_melanocephalus.k141_1160263                        5723 15 -    134917 A----AA--GA---GTTCTGAAGA
i Cacajao_melanocephalus.k141_1160263                   I 1 C 0
s Camelus_bactrianus.KN276303.1                           3218356  7 -   8989139 ------A--GA---GTCC------
i Camelus_bactrianus.KN276303.1                         C 0 T 593
s Camelus_dromedarius.KN271192.1                           396061  7 -  15254737 ------A--GA---GTCC------
i Camelus_dromedarius.KN271192.1                        C 0 T 594
s Camelus_ferus.KB016973.1                                2971794  7 +   6889770 ------A--GA---GTCC------
i Camelus_ferus.KB016973.1                              C 0 T 593
s CanFam4.chr31                                          11516883  9 +  39901454 A----AA--GA---ATCT------
i CanFam4.chr31                                         I 7 T 606
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   11901  9 +     87036 A----AA--GA---ATCT------
i Canis_lupus_VD.CanFam_VD_scaffold_16982               I 7 T 606
s Canis_lupus_dingo.QKWQ01001993.1                       11263544  9 -  35597290 a----aa--ga---atCT------
i Canis_lupus_dingo.QKWQ01001993.1                      I 7 T 606
s Canis_lupus_familiaris.chr31                           11086073  9 +  39895921 a----aa--ga---atCT------
i Canis_lupus_familiaris.chr31                          I 7 T 606
s Canis_lupus_orion.HG994411.1                           16453097  9 -  44759192 a----aa--ga---atCT------
i Canis_lupus_orion.HG994411.1                          I 7 T 606
s Capra_aegagrus.CM003214.1                              21324020  9 + 157394656 A----AA--GA---GCCC------
i Capra_aegagrus.CM003214.1                             I 6 T 574
s Capra_hircus.CM004562.1                               135705247  9 - 157403528 A----AA--GA---GCCC------
i Capra_hircus.CM004562.1                               I 6 T 574
s Capromys_pilorides.CapPil_scaffold_979108                   345  7 -      1248 -----------------gtacgag
i Capromys_pilorides.CapPil_scaffold_979108             I 1 I 34
s Carlito_syrichta.NW_007248099.1                          307342 15 +    345090 A----aa--ga---attctgaagg
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               58291  2 +     67245 A----A------------------
i Carollia_perspicillata.CarPer_scaffold_4436           I 12 T 574
s Castor_canadensis.CasCan_scaffold_47037                   28794 15 +     33760 A----AA--GA---GTTCTAAagg
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   157565 13 -    276539 AAAAAAA--GA---GTTC------
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 T 564
s Cavia_aperea.AVPZ01000278.1                            15784951 15 -  24422027 A----CA--GA---GTTCCAAAAG
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15796885 15 -  24440124 A----CA--GA---GTTCCAAAAG
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       175076 15 +    436027 A----CA--GA---GTTCCAAAAG
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18888970 12 -  29618158 ---------GA---GTTCTGAAGA
i Cebus_albifrons.Contig22                              I 1 C 0
s Cebus_olivaceus.k141_93739                                 6514 12 -     26817 ---------GA---GTTCTGAAGA
i Cebus_olivaceus.k141_93739                            I 1 C 0
s Cebus_unicolor.k141_239009                                10754 12 +     25043 ---------GA---GTTCTGAAGA
i Cebus_unicolor.k141_239009                            I 1 C 0
s Cephalopachus_bancanus.k141_702587                         6375 15 +     21754 A----AA--GA---ATTCtgaagg
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4362669  9 +   7569818 A----AA--GA---GTCC------
i Ceratotherium_simum.JH767818.1                        C 0 T 1184
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         2421  9 -      9338 A----AA--GA---GTCC------
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 T 1181
s Cercocebus_atys.KQ010443.1                              6552910 15 +   6739814 A----AA--GA---GTTCTGAACG
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      54387 15 -     54931 A----AA--GA---GTTCTGAACG
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         19371 15 -     19697 A----AA--GA---GTTCTGAACG
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         56902 15 -    107033 A----AA--GA---GTTCTGAACG
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        3342 15 -      3853 A----AA--GA---GTTCTGAAGG
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          27273 15 +     30494 A----AA--GA---GTTCTGAAGG
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           3302 15 -      4022 A----AA--GA---GTTCTGAAGG
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          3191 15 -      3505 A----AA--GA---GTTCTGAAGG
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           21979 15 +     35983 A----AA--GA---GTTCTGAAGG
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11988516 15 +  12117833 A----AA--GA---GTTCTGAAGG
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46475269 15 +  46592721 A----AA--GA---GTTCTGAAGG
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      33098 15 +     33420 A----AA--GA---GTTCTGAAGG
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        3132 15 -      3443 A----AA--GA---GTTCTGAAGG
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      4130 15 -      4669 A----AA--GA---GTTCTGAAGG
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        3918 15 -      4411 T----AA--GA---GTTCTGAAGG
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         3453 15 -      4205 A----AA--GA---GTTCTGAAGG
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           1618  9 -      6963 A----AG--GC---TTAC------
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           57295 15 -     68416 A----AC--GA---GTTCtgatgg
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            6337 15 +     13308 A----AA--GA---GTTCTGATgg
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             3771 15 -     18223 A----AA--GA---GTTCTGAAGA
i Cheracebus_lucifer.k141_619653                        I 1 C 0
s Cheracebus_lugens.k141_203936                             20794 15 +     25473 A----AA--GA---GTTCTGAAGA
i Cheracebus_lugens.k141_203936                         I 1 C 0
s Cheracebus_regulus.k141_2128895                           39833 15 +     57117 A----AA--GA---GTTCTGAAGA
i Cheracebus_regulus.k141_2128895                       I 1 C 0
s Cheracebus_torquatus.k141_315545                          44508 15 +     54541 A----AA--GA---GTTCTGAAGA
i Cheracebus_torquatus.k141_315545                      I 1 C 0
s Chinchilla_lanigera.JH721867.1                         15960104 14 +  43084221 -----CA--GA---GTTCCaaagg
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         69318 15 +    196370 A----AA--GA---GTTCTGAAGA
i Chiropotes_israelita.k141_1189915                     I 1 C 0
s Chiropotes_sagulatus.k141_773804                          13498 15 +     40510 A----AA--GA---GTTCTGAAGA
i Chiropotes_sagulatus.k141_773804                      I 1 C 0
s Chlorocebus_aethiops.ctg22                             15136737 15 -  15256731 A----AA--GA---GTTCTGAAGG
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      31783 15 -     53260 A----AA--GA---GTTCTGAAGG
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101142232 15 + 101219884 A----AA--GA---GTTCTGACGG
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                15260  9 -     21363 A----AG--GA---AAAC------
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 T 596
s Choloepus_hoffmanni.KN194586.1                           760571  9 +    964067 a----ag--ga---aaac------
i Choloepus_hoffmanni.KN194586.1                        C 0 T 596
s Colobus_angolensis.KN985967.1                          10887518 15 +  10971483 A----AA--GA---GTTGTGAAGG
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147662271 15 + 156195979 A----AA--GA---GTTGTGAAGG
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            14261 15 +     23629 A----AA--GA---GTTGTGAAGG
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60611416 12 +  78930452 a----aa--aaattgctc------
i Condylura_cristata.JH655880.1                         I 1 T 454
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         38405  9 -     40477 A----AG--GA---GTCC------
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 T 982
s Cricetomys_gambianus.CriGam_scaffold_949                 276729 15 -    399297 A----AA--GA---CTTAtgaagg
i Cricetomys_gambianus.CriGam_scaffold_949              I 2 C 0
s Cricetulus_griseus.LT883672.1                          53027359 15 +  72327488 A----AA--GA---GTTCtgaagg
i Cricetulus_griseus.LT883672.1                         I 3 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             18466  9 -     19186 A----CA--GA---ATTA------
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 T 566
s Cryptoprocta_ferox.CryFer_flattened_line_19014            50175  9 -     70449 A----AA--GA---ATCC------
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 7 T 590
s Ctenodactylus_gundi.CteGun_scaffold_447                  206516 13 -    956709 ------A--CA---TCTCtgaaag
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 29065  7 -     67205 -----------------CCACAAG
i Ctenomys_sociabilis.CteSoc_scaffold_19489             I 1 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                16108 13 +     26546 ------A--GA---GTTCCAaaag
i Cuniculus_paca.CunPac_flattened_line_16637            I 1 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             57210 13 -    236241 ------A--GA---GTTCCAaaag
i Dasyprocta_punctata.DasPun_flattened_line_634         I 1 C 0
s Dasypus_novemcinctus.JH568778.1                          182455  9 -   6883506 a----ag--gt---ttac------
i Dasypus_novemcinctus.JH568778.1                       C 0 T 2581
s Daubentonia_madagascariensis.ctg11                     16843152 15 +  31942871 A----AT--GA---GTTCtgatgg
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80035635  9 -  96802777 A----AA--GA---GTCC------
i Delphinapterus_leucas.KZ290064.1                      I 5 T 592
s Desmodus_rotundus.KZ672188.1                           18697600  2 -  18957592 a----a------------------
i Desmodus_rotundus.KZ672188.1                          I 12 T 573
s Dicerorhinus_sumatrensis.PEKH010003161.1                 321316  9 +    993696 A----AA--GA---GTCC------
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 T 1172
s Diceros_bicornis.DicBicMic_scaffold_9545                   1968  9 +    151128 A----AA--GA---ATCC------
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 T 1182
s Dinomys_branickii.DinBra_scaffold_1996                   155995 15 +    228994 A----CA--GA---GTTTCGAAGT
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3653715 12 +   4240102 A----AA--CA---GGCC---AGG
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 25278 12 +     28912 A----AA--CA---GGCC---AGG
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                34462 12 -     73477 ---------GA---GTTCCAAACG
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22994062  9 -  44670279 A----AG--GC---ATTC------
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 10982  9 +     24177 A----AA--GA---ATCC------
i Eidolon_helvum.KE772537.1                             C 0 T 592
s Elaphurus_davidianus.JRFZ01086400.1                     1490293  9 +   1727528 A----AG--GA---GTCC------
i Elaphurus_davidianus.JRFZ01086400.1                   I 6 T 589
s Ellobius_lutescens.LOEQ01003611.1                        238011 15 -    369425 G----AA--GA---GTTCtgaagg
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           5027 15 -      7838 A----AA--GA---GTTCtgaagg
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85869960  9 +  99434291 a----aa--ga---atCC------
i Enhydra_lutris.KZ291749.1                             I 7 T 610
s Eptesicus_fuscus.JH977687.1                             4702556  2 +   6522550 a----a------------------
i Eptesicus_fuscus.JH977687.1                           C 0 T 570
s Equus_asinus.JREZ01000062.1                             5851738  9 -   7175178 A----AA--GA---GTCC------
i Equus_asinus.JREZ01000062.1                           I 1 T 860
s Equus_caballus.CM000402.2                              13350241  9 +  41866177 A----AA--GA---GTCC------
i Equus_caballus.CM000402.2                             I 1 T 861
s Equus_przewalskii.ATBW01073585.1                          11731  9 +     92910 A----AA--GA---GTCC------
i Equus_przewalskii.ATBW01073585.1                      I 1 T 861
s Erinaceus_europaeus.JH835290.1                         11531289  6 +  16010500 ---------GA---GCTC------
i Erinaceus_europaeus.JH835290.1                        I 1 T 619
s Erythrocebus_patas.Contig8                             48768915 15 -  48907691 A----AA--GA---GTTCTGAAGG
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          313841  9 +    330699 A----AA--GA---GTCC------
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 T 596
s Eubalaena_japonica.EubJap_flattened_line_7756             60295  9 +     89355 A----AA--GA---GTCC------
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 T 620
s Eulemur_albifrons.k141_715837                              3337 15 +     13586 A----AA--GA---GTTCtgatgg
i Eulemur_albifrons.k141_715837                         I 7 C 0
s Eulemur_collaris.k141_311830                               3272 15 -      6809 A----AA--GA---GTTCtgatgg
i Eulemur_collaris.k141_311830                          I 7 C 0
s Eulemur_coronatus.k141_3240342                             9747 15 +     36558 A----AA--GA---GTTCtgatgg
i Eulemur_coronatus.k141_3240342                        I 7 C 0
s Eulemur_flavifrons.k141_903901                             6063 15 +     60246 A----AA--GA---GTTCtgacgg
i Eulemur_flavifrons.k141_903901                        I 7 C 0
s Eulemur_fulvus.k141_653297                                 9545 15 +    109717 A----AA--GA---GTTCtgatgg
i Eulemur_fulvus.k141_653297                            I 7 C 0
s Eulemur_macaco.k141_1341545                               13925 15 +     16540 A----AA--GA---GTTCtgatgg
i Eulemur_macaco.k141_1341545                           I 7 C 0
s Eulemur_mongoz.k141_825972                                14200 15 +     27497 A----AA--GA---GTTCtgatgg
i Eulemur_mongoz.k141_825972                            I 7 C 0
s Eulemur_rubriventer.k141_411740                           16657 15 +     26808 A----AA--GA---GTTCtgatgg
i Eulemur_rubriventer.k141_411740                       I 7 C 0
s Eulemur_rufus.k141_1620292                                31390 15 +     46535 A----AA--GA---GTTCtgatgg
i Eulemur_rufus.k141_1620292                            I 7 C 0
s Eulemur_sanfordi.k141_186399                              14113 15 -     29447 A----AA--GA---GTTCtgatgg
i Eulemur_sanfordi.k141_186399                          I 7 C 0
s Felis_catus.CM001386.2                                129891136  9 - 159252932 a----aa--ga---atcc------
i Felis_catus.CM001386.2                                I 7 T 587
s Felis_catus_fca126.CM031420.1                         129278208  9 - 158578461 a----aa--ga---atcc------
i Felis_catus_fca126.CM031420.1                         I 7 T 584
s Felis_nigripes.FelNig_flattened_line_8080                 19343  9 +     52776 A----AA--GA---ATCC------
i Felis_nigripes.FelNig_flattened_line_8080             I 7 T 584
s Fukomys_damarensis.KN123630.1                          13891055 15 -  19261668 A----TA--GA---GTTCCaaaag
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     209250 15 -    847004 A----AA--GA---GTTCtgaggg
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           11629 15 -     43889 A----AA--GA---GTTCtgaggg
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           8697 15 +     27357 A----AA--GA---GTTCtgaggg
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               154611 12 +    324696 ---------GA---GTTCtgaagg
i Galeopterus_variegatus.GalVar_scaffold_354            I 1 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    180093  9 -    189561 A----AG--GA---GTCT------
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 6 T 874
s Glis_glis.GliGli_scaffold_79770                           11009 13 -     18683 ------A--GA---GCTCtgaagg
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               3499 15 -     14630 A----AA--GA---GTTCtgaagg
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119650598 15 - 195582420 A----AA--GA---GTTCtgaagg
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   75746 15 +    118900 A----AA--GA---GCTCAgaagg
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              15383  9 +     53719 A----AA--GA---GTCC------
i Helogale_parvula.HelPar_flattened_line_22962          I 7 T 589
s Hemitragus_hylocrius.HemHyl_scaffold_16669                26291  9 -     91191 A----AA--GA---GTCC------
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 6 T 573
s Heterocephalus_glaber.JH602058.1                        2549446 14 +  31725842 A----CC--AA---GTTCCAAAA-
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               56368  9 +     73687 A----AG--GC---ATTC------
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 T 2096
s Hippopotamus_amphibius.HipAmp_scaffold_1308              145870  9 +    277961 A----AG--CA---GTCC------
i Hippopotamus_amphibius.HipAmp_scaffold_1308           I 5 T 587
s Hipposideros_armiger.JXIK01001085.1                      277187  9 -    477199 A----AA--GA---ATCC------
i Hipposideros_armiger.JXIK01001085.1                   C 0 T 565
s Hipposideros_galeritus.HipGal_scaffold_104691              6346  9 -      9143 A----AA--GA---GTCC------
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 T 566
s Hoolock_leuconedys.ctg79                                      2746 15 -   7690867 A----AA--GA---GTTCtgaagg
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 14478  9 -     67322 A----AA--GA---ATCC------
i Hyaena_hyaena.HyaHya_flattened_line_20729             I 7 T 630
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           17375 10 -    119109 --------------GTTCCAAAAG
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       I 3 C 0
s Hylobates_abbotti.k141_493872                              3311 15 +      5897 A----AA--GA---GTTCtgaagg
i Hylobates_abbotti.k141_493872                         I 25 I 220
s Hylobates_agilis.k141_624065                                175 15 +      2112 A----AA--GA---GTTCtgaagg
i Hylobates_agilis.k141_624065                          C 0 C 0
s Hylobates_klossii.k141_466549                              9755 15 +     11537 A----AA--GA---GTTCtgaagg
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14622856 15 -  25970782 A----AA--GA---GTTCtgaagg
i Hylobates_pileatus_b.ContigUN                                I 2656 C 0
s Hylobates_muelleri.k141_1389047                             112 15 -      2977 A----AA--GA---GTTCtgaagg
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             32243 15 -     60944 A----AA--GA---GTTCtgaagg
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     4498 15 +     22540 A----CA--GA---GTTCTaaaag
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7124389 15 +  13083262 A----AA--GA---GTTCtaaagg
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_1884019                                   1583 15 -      2196 A----AA--GA---GTTCtgatgg
i Indri_indri.k141_1884019                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               7623  9 +     17520 A----AA--GA---GTCC------
i Inia_geoffrensis.IniGeo_flattened_line_66725          I 5 T 591
s Jaculus_jaculus.JH725517.1                              8564030 15 +  11848649 a----aa--aa---gttctgaagg
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               22455  9 +     37189 A----AA--GA---GTCC------
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 T 592
s Lagothrix_lagothricha.k141_12968                          48340 15 -    147782 A----AA--GA---GTTCTGAAGA
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   112352  2 -    115756 A----A------------------
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 T 573
s Lepilemur_ankaranensis.k141_884009                        22267 15 +     39228 A----AA--GC---GTTCAgatgg
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            51642 15 +     63517 A----AA--GC---GTTCAgatgg
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        76886 15 +    116806 A----AA--GA---GTTCAgatgg
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     29906 15 -     33031 A----AA--GC---GTTCAgatgg
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3084177  9 -   3498232 A----AA--GA---ATCC------
i Leptonychotes_weddellii.KB714749.1                    I 7 T 615
s Lepus_americanus.LepAme_scaffold_62849                    11362 12 +     22452 A----AA--C----GTTCTgga--
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            134788  9 +   3060487 A----AA--GA---GTCC------
i Lipotes_vexillifer.KE558548.1                         I 5 T 598
s Lophocebus_aterrimus.ctg55                             19245998 15 +  19376315 A----AA--GA---GTTCTGAACG
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            8993 15 +     84689 A----AA--GA---GTTCtgatgg
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3776744 15 +   6799190 A----AA--GA---GTTCtgatgg
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20590908  9 -  62548349 A----AG--AT---ATTC------
i Loxodonta_africana.GL010040.1                         C 0 T 1859
s Lycaon_pictus.CM007556.1                               11085529  9 +  39895028 a----aa--ga---atCT------
i Lycaon_pictus.CM007556.1                              I 7 T 606
s Macaca_arctoides.k141_2201161                             17674 15 +     74745 A----AA--GA---GTTCTGAAGG
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12704184 15 +  12821369 A----AA--GA---GTTCTGAAGG
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               6280 15 +      6569 A----AA--GA---GTTCTGAAGG
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           44582 15 +     63263 A----AA--GA---GTTCTGAAGG
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_925451                                  590 15 +     10231 A----AA--GA---GTTCTGAAGG
i Macaca_fuscata.k119_925451                            C 0 C 0
s Macaca_leonina.k141_3421209                                2731 15 +      3017 A----AA--GA---GTTCTGAAGG
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_mulatta.NC_041755.1                            196033261 15 + 196197964 A----AA--GA---GTTCTGAAGG
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11443367 15 +  11645122 A----AA--GA---GTTCTGAAGG
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_radiata.k141_1580474                                3123 15 -      3617 A----AA--GA---GTTCTGAAGG
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 13453 15 -     55006 A----AA--GA---GTTCTGAAGG
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43838490 15 +  43892939 A----AA--GA---GTTCTGAAGG
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                5712 15 -      5978 A----AA--GA---GTTCTGAAGG
i Macaca_thibetana.k99_116940                           C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                700396  9 +    802869 A----AA--GA---CTCC------
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 T 588
s Mandrillus_leucophaeus.scaffold125                     43435160 15 -  43563597 A----AA--GA---GTTCTGAATG
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4447986 15 -   4543643 A----AA--GA---GTTCTGAATG
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            144893 11 +    252755 a----aaagaa---gtcc------
i Manis_javanica.JSZB01003966.1                         C 0 T 595
s Manis_pentadactyla.KN017078.1                             34968 11 +     58827 a----aaagaa---ttcc------
i Manis_pentadactyla.KN017078.1                         C 0 T 596
s Marmota_marmota.CZRN01000005.1                         36872224 15 +  64221397 A----CA--GA---GTTCtaaagg
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       63195  9 -    234502 A----AA--GA---GTCC------
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 T 732
s Mellivora_capensis.MelCap_flattened_line_146202             770  9 -      1999 A----AA--GA---ATCC------
i Mellivora_capensis.MelCap_flattened_line_146202       I 7 T 605
s Meriones_unguiculatus.MerUng_scaffold_52233               10293 15 +     15977 A----AA--TA---GTTCtgaagg
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1045098 15 -  26018355 A----AA--GA---GCTCtgaagg
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Microcebus_murinus.CM007691.1                          16508512 15 +  47401472 A----AA--GA---GTTCTGATGG
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  30475  9 -     48017 A----AG--GC---ATTC------
i Microgale_talazaci.MicTal_scaffold_34660              C 0 T 1282
s Micronycteris_hirsuta.MicHir_scaffold_37978               21476  2 -     32043 A----A------------------
i Micronycteris_hirsuta.MicHir_scaffold_37978           I 12 T 582
s Microtus_ochrogaster.CM001673.1                        22818214 15 -  98408828 A----AA--GA---GTTCtgaagg
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8208227  2 +  10048721 A----A------------------
i Miniopterus_natalensis.LDJU01000022.1                 C 0 T 572
s Miniopterus_schreibersii.MinSch_scaffold_24116            32899  2 +     45743 A----A------------------
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 T 573
s Miopithecus_ogouensis.k141_2666161                        33815 15 +     34273 A----AA--GA---GTTCTGAAGG
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         9685  9 -    104932 A----AA--GA---ACCC------
i Mirounga_angustirostris.MirAng_flattened_line_8852    I 7 T 818
s Mirza_zaza.k141_226143                                     3910 15 +      8497 A----AA--GA---GTTCTGATgg
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 145223  9 +    154973 A----AA--GA---GTCC------
i Monodon_monoceros.MonMon_M_scaffold_5598              I 5 T 596
s Mormoops_blainvillei.MorMeg_scaffold_2952                159982  2 +    265003 A----A------------------
i Mormoops_blainvillei.MorMeg_scaffold_2952             I 12 T 578
s Moschus_moschiferus.MosMos_scaffold_146101                 3395  9 -      4346 A----AG--GA---GTCC------
i Moschus_moschiferus.MosMos_scaffold_146101            I 6 T 589
s Mungos_mungo.MunMun_flattened_line_8729                  143074  9 -    168139 A----AA--GA---GTCC------
i Mungos_mungo.MunMun_flattened_line_8729               I 7 T 585
s Murina_feae.MurFea_scaffold_2254                          17863  2 -    100666 G----A------------------
i Murina_feae.MurFea_scaffold_2254                      C 0 T 566
s Mus_caroli.LT608236.1                                  70764706 15 +  92629107 A----AA--TA---GTTCtgaagg
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75487742 15 +  98207768 A----AA--TA---GTTCTGAAGG
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67553930 15 +  89017189 A----AA--TA---GTTCTGGAGG
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74328922 15 +  97876770 A----AA--TA---GTTCTGAAGG
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              9483 16 +     98495 AA---AA--GA---GCTctgaagg
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4422342  9 -  28371801 a----aa--ga---atCC------
i Mustela_putorius.JH417978.1                           I 7 T 610
s Myocastor_coypus.MyoCoy_scaffold_3653                     88411  7 -    117718 -----------------GCATGAG
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 1 C 0
s Myotis_brandtii.KE161952.1                               966188  2 +   8389877 A----A------------------
i Myotis_brandtii.KE161952.1                            C 0 T 571
s Myotis_davidii.KB114863.1                               5017877  2 +   6462685 A----A------------------
i Myotis_davidii.KB114863.1                             C 0 T 569
s Myotis_lucifugus.GL429887.1                             3463774  2 -   3747815 A----A------------------
i Myotis_lucifugus.GL429887.1                           C 0 T 570
s Myotis_myotis.MyoMyo_scaffold_6123                         8968  2 +     66751 A----A------------------
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 T 569
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3860  4 -      8794 A----AG--G--------------
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 T 589
s Nannospalax_galili.KL201303.1                            116567 13 +    362372 a----aa--at---ggtttgAA--
i Nannospalax_galili.KL201303.1                         I 1 C 0
s Nasalis_larvatus.k141_153429                               6190 15 +     48152 A----AA--GA---GTTGTGAAGG
i Nasalis_larvatus.k141_153429                          I 3 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4483077  9 -  14209539 A----AA--GA---ATCC------
i Neomonachus_schauinslandi.NINY01007774.1              I 7 T 611
s Neophocaena_asiaeorientalis.KZ688543.1                  3949836  9 -   4490290 A----AA--GA---GTCC------
i Neophocaena_asiaeorientalis.KZ688543.1                I 5 T 597
s Noctilio_leporinus.NocLep_scaffold_12062                  48089  2 +     94413 A----A------------------
i Noctilio_leporinus.NocLep_scaffold_12062              I 12 T 568
s Nomascus_annamensis.k141_1439838                           1058 15 +      3718 A----AA--GA---GTTCtgaagg
i Nomascus_annamensis.k141_1439838                      C 0 I 118
s Nomascus_concolor.k141_49591                               1281 15 +      2014 A----AA--GA---GTTCtgaagg
i Nomascus_concolor.k141_49591                          C 0 C 0
s Nomascus_gabriellae.k141_642452                             206 15 +      2851 A----AA--GA---GTTCtgaagg
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             23121 15 -  18771707 A----AA--GA---GTTCtgaagg
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                   834 15 +      4512 A----AA--GA---GTTTtgaagg
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                28522  9 +   3668941 a----aa--ga---atcc------
i Nyctereutes_procyonoides.CAJHUB010000786.1            I 7 T 606
s Ochotona_princeps.JH802095.1                            4994339 13 -  23139505 A----AA--CA---GTTCtgaa--
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3683908  7 +  10294119 -----------------CCACAAG
i Octodon_degus.JH651621.1                              I 1 C 0
s Odobenus_rosmarus.KB229369.1                             677722  9 -   3126709 A----AA--GA---ATCC------
i Odobenus_rosmarus.KB229369.1                          I 7 T 600
s Odocoileus_virginianus.KZ101650.1                       1078523  9 +   1425656 A----AG--GA---GTCC------
i Odocoileus_virginianus.KZ101650.1                     I 6 T 589
s Okapia_johnstoni.LVCL01S0017931.1                         35818  9 +     78940 A----AG--GA---GTCC------
i Okapia_johnstoni.LVCL01S0017931.1                     I 6 T 729
s Ondatra_zibethicus.OndZib_scaffold_6821                  123482 15 +    145789 A----AA--GA---GTTctgaagg
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  35244 15 +     62360 A----AG--GA---GTTCtgaagg
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7223520  9 -   7562323 A----AA--GA---GTCC------
i Orcinus_orca.KB316965.1                               I 5 T 597
s Orycteropus_afer.OryAfe_flattened_line_13509              43226  9 -     66828 A----AG--GC---ATTC------
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 T 1921
s Oryctolagus_cuniculus.CM000803.1                      141873994 12 + 163896628 A----AA--C----GTTCTgga--
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      305856  9 -    505867 a----aa--ga---atCC------
i Otocyon_megalotis.JAEUCK010005121.1                   I 7 T 601
s Otolemur_crassicaudatus.k141_321880                       37340 15 +     38679 A----AA--GA---GTTCtgaggg
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18006782 15 -  38779656 A----AA--GA---GTTCTGAGGG
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134076085  9 - 275406953 A----AA--GA---GTCC------
i Ovis_aries.CM001582.2                                 I 6 T 574
s Ovis_canadensis.OviCan_scaffold_6251                      77299  9 +    140051 A----AA--GA---GTCC------
i Ovis_canadensis.OviCan_scaffold_6251                  I 6 T 574
s Pan_paniscus.CM003386.1                               127572843 15 - 205426864 A----AA--GA---GTTCTGAAGG
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120149996 15 - 196562556 A----AA--GA---GTTCTGAAGG
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  32538  9 +    295523 A----AA--GA---ATCC------
i Panthera_onca.PanOnc_flattened_line_1615              I 7 T 588
s Panthera_pardus.KV860323.1                              3636272  9 +  18214204 a----aa--ga---atcc------
i Panthera_pardus.KV860323.1                            I 7 T 589
s Panthera_tigris.KE721879.1                              5025919  9 -   6340057 a----aa--ga---atcc------
i Panthera_tigris.KE721879.1                            I 7 T 588
s Pantholops_hodgsonii.KE114631.1                         1064946  9 -   1292953 A----AA--GA---GTCC------
i Pantholops_hodgsonii.KE114631.1                       I 6 T 574
s Papio_anubis.CM001492.2                               188153942 15 - 188283584 A----AA--GA---GTTCTGAACG
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            50154 15 +     76494 A----AA--GA---GTTCTGAACG
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47511339 15 +  47705337 A----AA--GA---GTTCTGAACG
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 65316 15 -    104429 A----AA--GA---GTTCTGAACG
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  15107 15 -     29451 A----AA--GA---GTTCTGAACG
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                35510 15 +     35859 A----AA--GA---GTTCTGAACG
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113854  9 -    135482 A----AA--GA---ATCC------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 I 7 T 604
s Perodicticus_ibeanus.k141_117958                           3383 15 -     23713 A----AA--GA---GTTCtgatgg
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            22681 15 -     27972 A----AA--GA---GTTCtgatgg
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      41282 12 -     45160 A----AA--CA---GTTC---AGA
i Perognathus_longimembris.PerPac_flattened_line_22291  I 8 C 0
s Peromyscus_maniculatus.KI615518.1                       4948426 15 -   8017169 A----AG--GA---GTTCtgaagg
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    10597 15 -     36578 A----GA--GA---GTTCCAAAAG
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            120137  9 -    122454 A----AA--GA---GTCC------
i Phocoena_phocoena.PhoPho_flattened_line_11948         I 5 T 597
s Piliocolobus_badius.k141_1610110                          38955 15 +     39618 A----AA--GA---GTTGTGAAGG
i Piliocolobus_badius.k141_1610110                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                        331 15 -     17985 A----AA--GA---GTTGTGAAGG
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26738176 15 +  26888534 A----AA--GA---GTTGTGACGG
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            95632  2 +    112873 A----A------------------
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 T 565
s Pithecia_albicans.k141_991845                             41823 15 -     61926 A----AA--GA---GTTCTGAAGA
i Pithecia_albicans.k141_991845                         I 1 C 0
s Pithecia_chrysocephala.k141_159118                        23252 15 +     78826 A----AA--GA---GTTCTGAAGA
i Pithecia_chrysocephala.k141_159118                    I 1 C 0
s Pithecia_hirsuta.k141_1152968                              7203 15 -     15800 A----AA--GA---GTTCTGAAGA
i Pithecia_hirsuta.k141_1152968                         I 1 C 0
s Pithecia_mittermeieri.k141_2119203                        10401 15 -     16101 A----AA--GA---GTTCTGAAGA
i Pithecia_mittermeieri.k141_2119203                    I 1 C 0
s Pithecia_pissinattii.k141_1102319                          3710 15 +      9673 A----AA--GA---GTTCTGAAGA
i Pithecia_pissinattii.k141_1102319                     I 1 C 0
s Pithecia_pithecia.tarseq_313                           13472704 15 -  19735023 A----AA--GA---GTTCTGAAGA
i Pithecia_pithecia.tarseq_313                          I 1 C 0
s Pithecia_vanzolinii.k141_831006                           11612 15 -     31692 A----AA--GA---GTTCTGAAGA
i Pithecia_vanzolinii.k141_831006                       I 1 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           4205  9 +     21690 A----AT--GA---GTCC------
i Platanista_gangetica.PlaMin_flattened_line_72990      I 7 T 597
s Plecturocebus_bernhardi.k141_959214                       21048 15 +     44506 A----AA--GA---GTTCTGAAGA
i Plecturocebus_bernhardi.k141_959214                   I 1 C 0
s Plecturocebus_brunneus.k141_498086                        21258 15 +     67491 A----AA--GA---GTTCTGAAGG
i Plecturocebus_brunneus.k141_498086                    I 1 C 0
s Plecturocebus_caligatus.k141_2539816                      11499 15 -     98129 A----AA--GA---GTTCTGAAGA
i Plecturocebus_caligatus.k141_2539816                  I 14 C 0
s Plecturocebus_cinerascens.k141_744510                     21104 15 +    147771 A----AA--GA---GTTCTGAAGA
i Plecturocebus_cinerascens.k141_744510                 I 1 C 0
s Plecturocebus_cupreus.k141_1223294                        21353 15 -     23762 A----AA--GA---GTTCTGAAGA
i Plecturocebus_cupreus.k141_1223294                    I 1 C 0
s Plecturocebus_dubius.k141_3565563                          1820 15 -     55515 A----AA--GA---GTTCTGAAGA
i Plecturocebus_dubius.k141_3565563                     I 14 C 0
s Plecturocebus_grovesi.k141_242819                         21173 15 +    152463 A----AA--GA---GTTCTGAAGA
i Plecturocebus_grovesi.k141_242819                     I 1 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      7933 15 +      8943 A----AA--GA---GTTCTGAAGA
i Plecturocebus_hoffmannsi.k141_1595076                 I 1 C 0
s Plecturocebus_miltoni.k141_841561                         10893 15 +    134592 A----AA--GA---GTTCTGAAGA
i Plecturocebus_miltoni.k141_841561                     I 1 C 0
s Plecturocebus_moloch.k141_890597                          21483 15 -     75465 A----AA--GA---GTTCTGAAGA
i Plecturocebus_moloch.k141_890597                      I 1 C 0
s Pongo_abelii.NDHI03003816.1                              185387 15 -    373494 A----AA--GA---GTTCTGAAGG
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19805295 15 +  19899266 A----AA--GA---GTTCtgaagg
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               3434 15 -     15069 A----AA--GA---GTTGTGAAGG
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              3568 15 +     14865 A----AA--GA---GTTGTGAAGG
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                76232  9 +     78963 A----AG--GC---ATTC------
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 T 2096
s Propithecus_coquerelli.NW_012147997.1                    666087 15 -   2312742 A----AA--GA---GTTCTGATGG
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         1917 15 +     11805 A----AA--GA---GTTCtgatgg
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           41252 15 +     52369 A----AA--GA---GTTCtgatgg
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         33641 15 -     44753 A----AA--GA---GTTCtgatgg
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            15562 15 +     27322 A----AA--GA---GTTCtgatgg
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       15201 15 -     53241 A----AA--GA---GTTCtgatgg
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         37472 15 -     48185 A----AA--GA---GTTCtgatgg
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           31844 15 +     77221 A----AA--TA---GTTCtgaagg
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            2650  2 -     27784 C----A------------------
i Pteronotus_parnellii.KE867983.1                       I 12 T 575
s Pteronura_brasiliensis.PteBra_flattened_line_1343        244436  9 -    344369 A----AA--GA---ATCC------
i Pteronura_brasiliensis.PteBra_flattened_line_1343     I 7 T 611
s Pteropus_alecto.KB031157.1                             13244783  9 -  17261082 A----AA--GA---ATCC------
i Pteropus_alecto.KB031157.1                            C 0 T 595
s Pteropus_vampyrus.KN525959.1                             602733  9 -   3946241 A----AA--GA---ATCC------
i Pteropus_vampyrus.KN525959.1                          C 0 T 594
s Puma_concolor.QAVW01000427.1                          131532501  9 - 161321710 a----aa--ga---atcc------
i Puma_concolor.QAVW01000427.1                          I 7 T 588
s Pygathrix_cinerea.k141_374971                             27559 15 +     56732 A----AA--GA---GTTGTGAAGG
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6804050 15 +   6970761 A----AA--GA---GTTGTGAAGG
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             3444 15 +     18040 A----AA--GA---GTTGTGAAGG
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                14600  9 +     68503 A----AG--GA---GTCC------
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 6 T 588
s Rattus_norvegicus.chr11                                13913793 15 +  90463843 A----AA--TA---GTTGtgaagg
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1786593  9 +   2252614 A----AG--GA---ATCC------
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 T 584
s Rhinopithecus_bieti.k119_102124                           13996 15 -     14454 A----AA--GA---GTTGTGAAGG
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206375322 15 - 206558726 A----AA--GA---GTTGTGAAGG
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44852970 15 -  45163003 A----AA--GA---GTTGTGAAGG
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                18073  9 +    109198 A----AA--GA---ATCC------
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 T 592
s Saiga_tatarica.SaiTat_scaffold_82192                       6402  9 +     12214 A----AG--GA---GTCC------
i Saiga_tatarica.SaiTat_scaffold_82192                  I 6 T 583
s Saimiri_boliviensis.NW_024100938.1                     15670924 13 -  43202129 A----AA--GA---G--CTGAAGA
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        2790 13 +     34089 A----AA--GA---G--CTGACGA
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              2731 13 -     60842 A----AA--GA---G--CTGACGA
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              2826 13 +     67014 A----AA--GA---G--CTGACGA
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              2804 13 +     60816 A----AA--GA---G--CTGACGA
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 2741 13 -     76454 A----AA--GA---G--CTGACGA
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17339494 15 -  30362882 A----AA--GA---GTTCTGAAGA
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         18869 15 -     62485 A----AA--GA---GTTCTGAAGA
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   30162  9 -    114521 A----AA--GA---GCCC------
i Scalopus_aquaticus.ScaAqu_scaffold_9300               I 1 T 591
s Semnopithecus_entellus.k141_1527475                       25986 15 +     26421 A----AA--GA---GTTGTGAAGG
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       6446 15 +     20762 A----AA--GA---GTTGTGAAGG
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         40181 15 +     40653 A----AA--GA---GTTGTGAAGG
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                           10738 15 -     12194 A----AA--GA---GTTGTGAAGG
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     24160 15 -     27512 A----AA--GA---GTTGTGAAGG
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         33175 15 -     33692 A----AA--GA---GTTGTGAAGG
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   98019 15 -    120886 A----AA--GA---GTTCtgaagg
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            16783  9 +    739146 A----AA--GG---GTCC------
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 T 573
s Sorex_araneus.JH798170.1                               17749424  9 -  27805282 A----CA--GA---GTTT------
i Sorex_araneus.JH798170.1                              C 0 T 999
s Spermophilus_dauricus.KZ294190.1                        2238306 15 +   2842873 A----AA--GA---GTTCTAAAGG
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             233187  9 -    276980 A----AA--GA---ATCC------
i Spilogale_gracilis.SpiGra_flattened_line_905          I 7 T 596
s Suricata_suricatta.SurSur_flattened_line_20339            25740  9 +     62062 A----AA--GA---GTCC------
i Suricata_suricatta.SurSur_flattened_line_20339        I 7 T 587
s Sus_scrofa.CM000824.4                                 189270662 13 + 218635234 AAATATA--GA---GTTC------
i Sus_scrofa.CM000824.4                                 C 0 T 604
s Symphalangus_syndactylus.tarseq_24                        13113 15 -  13920577 A----AA--GA---GTTCtgaagg
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               4579  2 -      6213 A----A------------------
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 T 564
s Tamandua_tetradactyla.TamTet_scaffold_26877               13535  4 +     45698 A----AG--G--------------
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 T 590
s Tapirus_indicus.TapInd_scaffold_176                      805521  9 +   1148477 A----AA--GA---GTCC------
i Tapirus_indicus.TapInd_scaffold_176                   C 0 T 592
s Tapirus_terrestris.TapTer_scaffold_14939                  56181  9 +     99546 A----AA--GA---GTCC------
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 T 591
s Tarsius_lariang.k141_609102                               24825 15 +     42269 A----AA--GA---ATTCtgaagg
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               58141 15 +     65473 A----AA--GA---ATTCtgaagg
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194005478 15 - 194193292 A----AA--GA---GTTCTGAACG
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             37654 15 -     47444 A----AA--GA---GTTCCaaaag
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  4387  9 +      6782 a----ag--gc---ttat------
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 T 2563
s Tonatia_saurophila.TonSau_scaffold_3334                  134660  2 -    259118 A----A------------------
i Tonatia_saurophila.TonSau_scaffold_3334               I 12 T 575
s Trachypithecus_auratus.k141_738098                        24556 15 +     38948 A----AA--GA---GTTGTGAAGG
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   18283 15 -     32910 A----AA--GA---GTTGTGAAGG
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       24181 15 +     24652 A----AA--GA---GTTGTGAAGG
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      3059 15 -      3559 A----AA--GA---GTTGTGAAGG
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           41003 15 -     54611 A----AA--GA---GTTGTGAAGG
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       17004 15 +     17312 A----AA--GA---GTTGTGAAGG
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    24367 15 -     25040 A----AA--GA---GTTGTGAAGG
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          3028 15 +      3528 A----AA--GA---GTTGTGAAGG
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  49395 15 +     51589 A----AA--GA---GTTGTGAAGG
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       12571 15 +     14732 A----AA--GA---GTTGTGAAGG
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       3048 15 -     28054 A----AA--GA---GTTGTGAAGG
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44657843 15 -  44834318 A----AA--GA---GTTGTGAAGG
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        2852 15 +      3372 A----AA--GA---GTTGTGAAGG
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   3994  9 +     90398 A----AA--GG---GTCC------
i Tragulus_javanicus.TraJav_scaffold_14717              I 6 T 576
s Trichechus_manatus.JH594618.1                          16081370  9 +  31416278 A----AG--GC---ATTC------
i Trichechus_manatus.JH594618.1                         C 0 T 1856
s Tupaia_chinensis.KB320831.1                             2790739 15 -   3938065 A----AA--GA---GTTctgaaga
i Tupaia_chinensis.KB320831.1                           C 0 I 263
s Tupaia_tana.TupTan_flattened_line_68454                    3262 15 +     13056 A----AA--GA---GTTCTGAAGA
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69312237  9 -  96451834 A----AA--GA---GTCC------
i Tursiops_truncatus.MRVK01000923.1                     I 5 T 595
s Uropsilus_gracilis.UroGra_scaffold_139357                   687  9 +      2103 A----AG--GA---GTCC------
i Uropsilus_gracilis.UroGra_scaffold_139357             n 570 C 0
s Ursus_maritimus.KK498671.1                              6512994  9 +  28682327 a----aa--ga---atCC------
i Ursus_maritimus.KK498671.1                            I 7 T 615
s Varecia_rubra.k141_432109                                  3609 15 -     20643 A----AA--GA---GTTCtgatgg
i Varecia_rubra.k141_432109                             I 7 C 0
s Varecia_variegata.k141_775891                             23151 15 -     33872 A----AA--GA---GTTCtgatgg
i Varecia_variegata.k141_775891                         I 7 C 0
s Vicugna_pacos.KN269600.1                                1523463  7 -   2331223 ------A--GA---GTCC------
i Vicugna_pacos.KN269600.1                              C 0 T 590
s Vulpes_lagopus.VulLag_flattened_line_2045                135929  9 -    281493 A----AA--GA---ATCC------
i Vulpes_lagopus.VulLag_flattened_line_2045             I 7 T 606
s Xerus_inauris.XerIna_scaffold_7898                       125398 15 -    134049 A----AA--GA---GTTCTAAAGG
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        212457  9 -    227762 A----AA--GA---ATCC------
i Zalophus_californianus.ZalCal_flattened_line_4097     I 7 T 605
s Zapus_hudsonius.ZapHud_scaffold_64392                     13616 15 -     20485 A----AG--GA---GTTCtgagcg
i Zapus_hudsonius.ZapHud_scaffold_64392                 I 1 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           5734  9 -      8775 A----AA--GA---GTCC------
i Ziphius_cavirostris.ZipCav_flattened_line_127025      I 5 T 596
e Chrysochloris_asiatica.ChrAsi_scaffold_141308              8820 2035 -     12508 T
e Mesoplodon_bidens.MesBid_scaffold_183284                   2166 255 +      2166 T
e Elephantulus_edwardii.JH947210.1                        7805914 1445 +  15467074 T
e Prolemur_simus.MPIZ01000048.1                           6846762  1 +  12164890 I
e Piliocolobus_kirkii.k141_557609                           19957 700 +     19957 T
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65667885  0 +  89412551 C
e Nycticebus_coucang.k141_2051882                            2265  0 +      6470 C
e Nycticebus_bengalensis.LG16                            65565537  0 -  95554990 C
e Macaca_tonkeana.k141_2870633                               2864 158 -     27140 T
e Macaca_nigra.k141_282495                                   2859 158 -     46448 T
e Macaca_maura.k141_251854                                  43912 158 -     79256 T
e Lemur_catta.scaffold_1                                258405386  1 - 285822530 I
e Hapalemur_occidentalis.k141_797938                        43697  1 -     54384 I
e Hapalemur_meridionalis.k141_186231                        27103  1 -     42470 I
e Hapalemur_griseus.k141_1387522                             3826  1 +     56096 I
e Hapalemur_gilberti.k141_97962                             26366  1 +     26611 I
e Hapalemur_alaotrensis.k141_1198205                         3890  1 +      3980 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               10115 34 +    209709 tgttcaggaaatgcca-gtcc-t---aa-----a-tg---gattgctt
s Acomys_cahirinus.AcoCah_scaffold_1625                    110852 34 -    189883 agttcaggaagtgtca-cccc-a---aa-----g-ta---cagtactg
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   11297 34 -     22067 agtttgggaagttcta-tcct-a---aa-----a-tg---tgccacta
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_3103707                  61129 34 +     61638 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-CG---TATTGCTT
i Allenopithecus_nigroviridis.k141_3103707              C 0 I 38
s Allochrocebus_lhoesti.k141_4825038                        52941 34 +     53391 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TATTGCTT
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         3666 34 +     72529 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TATTGCTT
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          3241 34 +      3797 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TATTGCTT
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             8387 34 -     18050 TGTTCAGGAAATGCCA-TCCC-T---AA-----A-TA---TATTGCTC
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  9500 34 -     11521 tgttcaggaaatgcca-tccc-t---aa-----a-ta---tattgctt
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              9064 34 -     21359 TGTTCAGGAAATGCCA-TCCC-T---AA-----A-TA---TATTGCTC
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1029606                                 324 34 -      1200 TGTTCAGGAAATGCCA-TCCC-T---AA-----A-TA---TATTGCTT
i Alouatta_juara.k141_1029606                           C 0 I 38
s Alouatta_macconnelli.k141_1331706                          8355 34 -     10438 TGTTCAGGAAATGCCA-TCCC-T---AA-----A-TA---TATTGCTT
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            5011 34 +      7047 TGTTCAGGAAATGCCA-TCCC-T---AA-----A-TA---TATTGCTT
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             8297 33 +     10410 TGTTCAGGAAATGCCA-TCCC-T----A-----A-TA---TATTGCTT
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            2100 34 -      4927 TGTTCAGGAAATGCCA-TCCC-T---AA-----A-TA---TATTGCTT
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             5030 34 +      6429 TGTTCAGGAAATGCCA-TCCC-T---AA-----A-TA---TATTGCTT
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Aotus_azarae.k141_3170768                                 60753 34 +     78111 TGTTCAGGAAATGCCA-TCCC-T---AA-----A-TA---TATTGCTT
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            3694 34 +     22701 TGTTCAGGAAATGCCA-TCCC-T---AA-----A-TA---TATTGCTT
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5747651 34 +   9889416 TGTTCAGGAAATGCCA-TCCC-T---AA-----A-TA---TATTGCTT
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             4236 34 -    104377 TGTTCAGGAAATGCCA-TCCC-T---AA-----A-TA---TATTGCTT
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               4242 34 +     23246 TGTTCAGGAAATGCCA-TCCC-T---AA-----A-TA---TATTGCTT
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     2258 13 +      5067 CATTCAGGAAAAA-----------------------------------
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 I 10
s Arctocebus_calabarensis.k141_1161114                      16189 34 +     17483 agttcagaaaatccca-cccg-a---aa-----a-ta---tacagctt
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9537486 34 +  39197703 TGTTCAGGAAATGCCA-TCCC-T---AA-----A-TA---TATTGCTT
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             58770 34 +     85812 TGTTCAGGAAATGCCA-TCCC-T---AA-----A-TA---TATTGCTT
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 9769 34 +     89302 TGTTCAGGAAATGCCA-TCCC-T---AA-----A-TA---TATTGCTT
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             14274 34 -     58268 TGTTCAGGAAATGCCA-TCCC-T---AA-----A-TA---TATTGCTT
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             62265 34 +    119057 TGTTCAGGAAATGCCA-TCCC-T---AA-----A-TA---TATTGCTT
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               4234 34 -     25888 TGTTCAGGAAATGCCA-TCCC-T---AA-----A-TA---TATTGCTT
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 5006 34 -     16375 agttgagaaaatgcca-cccc-a---aa-----a-ta---tactgctt
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              1325 34 +      2719 agttgagaaaatgcca-cccc-a---aa-----a-ta---tactgctt
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Cacajao_ayresi.k141_724503                               112124 34 -    171031 TGTTCAGGAAATGTCA-TCCC-T---AA-----A-TA---TATTGCTT
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 11150 34 +    125063 TGTTCAGGAAATGTCA-TCCC-T---AA-----A-TA---TATTGCTT
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                13198 34 -    216513 TGTTCAGGAAATGTCA-TCCC-T---AA-----A-TA---TATTGCTT
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        5738 34 -    134917 TGTTCAGGAAATGTCA-TCCC-T---AA-----A-TA---TATTGCTT
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Capromys_pilorides.CapPil_scaffold_933029                   434 34 +      1311 -gttcaaaaaatgcca-ccccaa---aa-----a-ta---tgtaactt
i Capromys_pilorides.CapPil_scaffold_933029             I 150 T 450
s Carlito_syrichta.NW_007248099.1                          307357 34 +    345090 agtttagaaaatgcca-cccc-a---ag-----a-ta---tactgctc
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   28809 34 +     33760 agttcaagaaatgaca-cccc-a---aa-----a-ta---tgccactt
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15784966 34 -  24422027 -ACTGAGTAAATGCCG-CGCTGA---AA-----A-TA---TTTAACTT
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15796900 34 -  24440124 -ACTGAGGAAATGCTG-CGCTGA---AA-----A-TA---TTTAACTT
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       175091 34 +    436027 -ACTGaggaaatgctg-cgctga---aa-----a-ta---tttaactt
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18888982 34 -  29618158 AGTTCAGGAAATGCCA-TTCC-T---AA-----A-TA---TATTGCTT
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 6526 34 -     26817 AGTTCAGGAAATGCCA-TTCC-T---AA-----A-TA---TATTGCTT
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                10766 34 +     25043 AGTTCAGGAAATGCCA-TTCC-T---AA-----A-TA---TATTGCTT
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         6390 34 +     21754 agtttagaaaatgcca-cccc-a---ag-----a-ta---tactgctc
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6552925 34 +   6739814 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TATTGCTT
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      54402 34 -     54931 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TATTGCTT
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         19386 34 -     19697 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TATTGCTT
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         56917 34 -    107033 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TATTGCTT
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        3357 34 -      3853 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TATTGCTT
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          27288 34 +     30494 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TATTGCTT
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           3317 34 -      4022 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TATTGCTT
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          3206 34 -      3505 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TATTGCTT
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           21994 34 +     35983 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TATTGCTT
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11988531 34 +  12117833 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TATTGCTT
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46475284 34 +  46592721 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TATTGCTT
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      33113 34 +     33420 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TATTGCTT
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        3147 34 -      3443 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TATTGCTT
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      4145 34 -      4669 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TATTGCTT
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        3933 34 -      4411 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TATTGCTT
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         3468 34 -      4205 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TATTGCTT
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           57310 34 -     68416 aattcagaaaatgcca-ccct-a---ag-----a-ta---tactgctt
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            6352 34 +     13308 aattcagaaaatgcca-ccct-a---aa-----a-ta---tactgctt
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             3786 34 -     18223 TGTTCAGGAAATGTCA-TCCC-T---AC-----A-TA---TATACCTT
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             20809 34 +     25473 TGTTCAGGAAATGTCA-TCCC-T---AC-----A-TA---TATACCTT
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           39848 34 +     57117 TGTTCAGGAAATGTCA-TCCC-T---AC-----A-TA---TATACCTT
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          44523 34 +     54541 TGTTCAGGAAATGTCA-TCCC-T---AC-----A-TA---TATACCTT
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15960118 34 +  43084221 -gttcaggaaatgcta-acctga---aa-----a-ta---cataactt
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         69333 34 +    196370 TGTTCAGGAAATGTCA-TCCC-T---AA-----A-TA---TATTGCTT
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          13513 34 +     40510 TGTTCAGGAAATGTCA-TCCC-T---AA-----A-TA---TATTGCTT
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15136752 34 -  15256731 TGTTCAGGAAATTCCA-GCCC-T---AA-----A-TG---TATTGCTT
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      31798 34 -     53260 TGTTCAGGAAATTCCA-GCCC-T---AA-----A-TG---TATTGCTT
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101142247 34 + 101219884 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TATTGCTT
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10887533 34 +  10971483 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-CG---TATTGCTT
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147662286 34 + 156195979 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-CG---TATTGCTT
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            14276 34 +     23629 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-CG---TATTGCTT
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 276744 32 -    399297 agtccaggaagtgcca-ctcc-a---at-----a-ta---tggtac--
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53027374 34 +  72327488 agttgtggaagtgtca-ccca-a---aa-----a-ta---tggtgcta
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  206529 34 -    956709 gatatgggaaatgcta-cctc-c---aa-----a-ta---catcattt
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 29072 34 -     67205 -TCTGAGGAAATGCTA-CTCTGA---AA-----A-TA---TGTAATTT
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                16121 34 +     26546 -attcaggaaatgctg-ctccaa---aa-----a-ta---cgtaattt
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             57223 34 -    236241 -attcaggaaatgctg-tcctaa---aa-----a-ta---cataattt
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16843167 34 +  31942871 agttcagaaaatgcca-cccc-a---aa-----a-ta---tattgctt
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   156010 34 +    228994 -gttcgggggatgcca-ccctga---ga-----a-ta---agtaattt
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3653727 34 +   4240102 AGTTTAGGAAATGC----CCC-A---TA-----G-TAAAATGCTATAA
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 25290 34 +     28912 AGTTTAGGAAATGC----CCC-A---TA-----G-TAAAATGCTATAA
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                34474 34 -     73477 -Attgagggaatgctg-cactga---aa-----a-ta---tgtaattt
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        238026 34 -    369425 actaacagaaaagtca-cccc-c---aa-----a-tc---tggtacta
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           5042 34 -      7838 actaacagaagagtca-cccc-c---aa-----a-tc---tggtacta
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Erythrocebus_patas.Contig8                             48768930 34 -  48907691 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TATTGCTT
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eulemur_albifrons.k141_715837                              3352 34 +     13586 agttcagaaaatgcca-cccc-a---aa-----a-ta---tactgctt
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               3287 34 -      6809 agttcagaaaatgcca-cccc-a---aa-----a-ta---tactgctt
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             9762 34 +     36558 agttcagaaaatgcca-cccc-a---aa-----a-ta---tactgctt
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             6078 34 +     60246 agttcagaaaatgcca-cccc-a---aa-----a-ta---tactgctt
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 9560 34 +    109717 agttcagaaaatgcca-cccc-a---aa-----a-ta---tactgctt
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               13940 34 +     16540 agttcagaaaatgcca-cccc-a---aa-----a-ta---tactgctt
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                14215 34 +     27497 agttcagaaaatgcca-cccc-a---aa-----a-ta---tactgctt
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           16672 34 +     26808 agttcagaaaatgcca-cccc-a---aa-----a-ta---tattgctt
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                31405 34 +     46535 agttcagaaaatgcca-cccc-a---aa-----a-ta---tactgctt
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              14128 34 -     29447 agttcagaaaatgcca-cccc-a---aa-----a-ta---tactgctt
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Fukomys_damarensis.KN123630.1                          13891070 34 -  19261668 -gttcaggaaatgcca-ccctga---ga-----a-ta---tataattt
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     209265 34 -    847004 agttcagaaaatccca-cccc-a---aa-----a-ta---tacagctt
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           11644 34 -     43889 agttcagaaaatccca-cccc-a---aa-----a-ta---tacagctt
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           8712 34 +     27357 acttcagaaaatccca-cccc-a---aa-----a-ta---tacagctt
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               154623 34 +    324696 agtttagagaatgcca-cccc-a---aa-----a-ta---tgctgctt
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           11022 34 -     18683 aggtcaggaaatgcca-ccgc-c---aa-----c-ta---ggccactt
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               3514 34 -     14630 tgttcaggaaatgcca-gccc-t---aa-----g-tg---gattgctt
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119650613 34 - 195582420 tgttcaggaaatgcca-gccc-t---aa-----g-tg---gattgctt
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   75761 34 +    118900 aggtcaggaaatgcca-tccc-c---aa-----c-ta---ggcaactt
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2549460 34 +  31725842 -GTtcaggaaaagcca-ccctga---aa-----a-ta---tataattt
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Hoolock_leuconedys.ctg79                                      2761 34 -   7690867 tgttcaggaaatgcca-gccc-t---ga-----g-tg---gattgctt
i Hoolock_leuconedys.ctg79                                 C 0 T 516
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           17385 34 -    119109 -ACTGAGGAAATTCTG-CACTGA---AA-----A-TA---TGTAATTA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_866183                               163 34 -      1027 tgttcaggaaatgcca-gccc-t---ga-----g-tg---gattgctt
i Hylobates_abbotti.k141_866183                         I 15 I 497
s Hylobates_agilis.k141_624065                                190 34 +      2112 tgttcaggaaatgcta-gccc-t---ga-----g-tg---gattgctt
i Hylobates_agilis.k141_624065                          C 0 I 186
s Hylobates_klossii.k141_466549                              9770 34 +     11537 tgttcaggaaatgcta-gccc-t---ga-----g-tg---gattgctt
i Hylobates_klossii.k141_466549                         C 0 I 182
s Hylobates_pileatus_b.ContigUN                                 14622871 34 -  25970782 tgttcaggaaatgcta-gccc-t---ga-----g-tg---gattgctt
i Hylobates_pileatus_b.ContigUN                                C 0 I 186
s Hylobates_muelleri.k141_1389047                             127 34 -      2977 tgttcaggaaatgcta-gccc-t---ga-----g-tg---gattgctt
i Hylobates_muelleri.k141_1389047                       C 0 I 186
s Hylobates_pileatus_a.tarseq_592                             32258 34 -     60944 tgttcaggaaatgcta-gccc-t---ga-----g-tg---gattgctt
i Hylobates_pileatus_a.tarseq_592                         C 0 I 186
s Hystrix_cristata.HysCri_scaffold_50788                     4513 34 +     22540 -gttcaggaaacacca-ctctga---ag-----a-ta---tgaacttt
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7124404 13 +  13083262 agttcaggaaaag-----------------------------------
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 I 10
s Indri_indri.k141_1884019                                   1598 35 -      2196 agttcagaaaatgcca-cccc-a---aa-----aaca---tactgctt
i Indri_indri.k141_1884019                              C 0 C 0
s Jaculus_jaculus.JH725517.1                              8564045 34 +  11848649 agtttgagaagttcta-tccg-a---aa-----a-tg---tgccacta
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Lagothrix_lagothricha.k141_12968                          48355 34 -    147782 Tgttcaggaaatgcca-tccc-t---aa-----a-ta---tattgctt
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        22282 34 +     39228 agttcagaaaatgcca-ctcc-a---aa-----a-ta---tactgctt
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            51657 34 +     63517 agttcagaaaatgcca-ctcc-a---aa-----a-ta---tactgctt
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        76901 34 +    116806 agttcagaaaatgcca-cccc-a---aa-----a-ta---tactgctt
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     29921 34 -     33031 agttcagaaaatgcca-ctcc-a---aa-----a-ta---tactgctt
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    11374 30 +     22452 -gtttaggaaatacca-c----c---ta-----a-ta---tgccacct
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lophocebus_aterrimus.ctg55                             19246013 34 +  19376315 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TATTGCTT
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            9008 34 +     84689 agttcagaaaatccca-cccc-a---aa-----a-ta---tacagctt
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3776759 34 +   6799190 agttcagaaaatccca-cccc-a---aa-----a-ta---tacagctt
i Loris_tardigradus.ctg97                               C 0 C 0
s Macaca_arctoides.k141_2201161                             17689 34 +     74745 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TATTGCTT
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12704199 34 +  12821369 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TATTGCTT
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               6295 34 +      6569 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TATTGCTT
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           44597 34 +     63263 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TATTGCTT
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_925451                                  605 34 +     10231 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TATTGCTT
i Macaca_fuscata.k119_925451                            C 0 C 0
s Macaca_leonina.k141_3421209                                2746 34 +      3017 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TATTGCTT
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_mulatta.NC_041755.1                            196033276 34 + 196197964 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TATTGCTT
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11443382 34 +  11645122 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TATTGCTT
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_radiata.k141_1580474                                3138 34 -      3617 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TATTGCTT
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 13468 34 -     55006 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TATTGCTT
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43838505 34 +  43892939 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TATTGCTT
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                5727 34 -      5978 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TATTGCTT
i Macaca_thibetana.k99_116940                           C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43435175 34 -  43563597 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TACTGCTT
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4448001 34 -   4543643 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TATTGCTT
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36872239 13 +  64221397 agttcaggaaaag-----------------------------------
i Marmota_marmota.CZRN01000005.1                        C 0 I 10
s Meriones_unguiculatus.MerUng_scaffold_52233               10308 34 +     15977 agtccaggaagtatca-ccct-a---aa-----a-ta---tggtacta
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1045113 34 -  26018355 agctacagaagtgtca-cccc-a---aa-----a-ta---tggtttta
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Microcebus_murinus.CM007691.1                          16508527 34 +  47401472 AATTCAAAAAATGCCA-CCCT-A---AA-----A-TA---TACTGCTT
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22818229 34 -  98408828 agtagcagaagtgcca-tccc-c---aa-----a-tc---tggtacta
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        33830 34 +     34273 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TACTGCTT
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirza_zaza.k141_226143                                     3925 34 +      8497 aattcaaaaaatgcca-ctct-a---aa-----a-ta---tactgctt
i Mirza_zaza.k141_226143                                C 0 C 0
s Mus_caroli.LT608236.1                                  70764721 34 +  92629107 agtccaggaagtgtca-ctcc-a---ac-----a-tg---tagtacta
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75487757 34 +  98207768 AGTCCAGGAAGTGTCA-CCCC-A---GC-----A-TG---AGGTACTA
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67553945 34 +  89017189 AGTCCAGGAAGTGTCA-CCCC-A---AC-----A-TG---TGGTACTA
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74328937 34 +  97876770 AGTCCAGGAagtgtca-ccac-a---gc-----a-tg---aggtacTA
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              9499 34 +     98495 aggtcagaaggggcta-cccc-c---aa-----c-ta---ctctactt
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     88418 34 -    117718 -gttcagaaaatgcta-ccctga---aa-----a-ta---tgtcacct
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Nannospalax_galili.KL201303.1                            116580 19 +    362372 -ATTCAGGAAGTATAA-CCCC---------------------------
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               6205 34 +     48152 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TATTGCTT
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Nomascus_annamensis.k141_302224                             175 34 +      1516 tgttcaggaaatgcca-gccc-t---ga-----g-tg---gattgctt
i Nomascus_annamensis.k141_302224                       I 40 C 0
s Nomascus_concolor.k141_49591                               1296 34 +      2014 tgttcaggaaatgcca-gccc-t---ga-----g-tg---gattgctt
i Nomascus_concolor.k141_49591                          C 0 C 0
s Nomascus_gabriellae.k141_642452                             221 34 +      2851 tgttcaggaaatgcca-gccc-t---ga-----g-tg---gattgctt
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             23136 34 -  18771707 tgttcaggaaatgcca-gccc-t---ga-----g-tg---gattgctt
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                   849 34 +      4512 tgttcaggaaatgcca-gccc-t---ga-----g-tg---gattgctt
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Ochotona_princeps.JH802095.1                            4994352 33 -  23139505 -gtttaggaaatgtca-ccca-a---aa-----a-ta---cactatct
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3683915 34 +  10294119 -Tttcaggaaatgcta-ccctga---aa-----a-ta---tgtaattt
i Octodon_degus.JH651621.1                              C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  123497 34 +    145789 agtaacagaagtgtca-cccc-c---aa-----a-tc---tggtactg
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  35259 32 +     62360 agttgcagaaatggta-cccc-a---aa-----a-ta---cggtgc--
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141874006 33 + 163896628 -gtttaggaaatgcca-c----accaaa-----a-ta---tgccacct
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       37355 34 +     38679 agttcagaaaatccca-cccc-a---aa-----a-ta---tacagctt
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18006797 34 -  38779656 AATTCAGAAGATCCCA-CCCC-A---AA-----A-TA---TACAGCTT
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Pan_paniscus.CM003386.1                               127572858 34 - 205426864 TGTTCAGGAAATGCCA-GCCC-T---AA-----G-TG---GATTGCTT
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120150011 34 - 196562556 TGTTCAGGAAATGCCA-GCCC-T---AA-----G-TG---GATTGCTT
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Papio_anubis.CM001492.2                               188153957 34 - 188283584 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TATTGCTT
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            50169 34 +     76494 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TATTGCTT
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47511354 34 +  47705337 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TATTGCTT
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 65331 34 -    104429 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TATTGCTT
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  15122 34 -     29451 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TATTGCTT
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                35525 34 +     35859 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TATTGCTT
i Papio_ursinus.k141_3762866                            C 0 C 0
s Perodicticus_ibeanus.k141_117958                           3398 34 -     23713 agttcagaaaatccca-cccc-a---aa-----a-ta---tacagctt
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            22696 34 -     27972 agttcagaaaatccca-cccc-a---aa-----a-ta---tatagctt
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      41294 34 -     45160 TGTTTAGAAAATGT----CCC-C---CA-----G-TAAAATGCCACTA
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4948441 34 -   8017169 agttgcagaaatggta-cccc-a---aa-----a-ta---cggtgcta
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    10612 35 -     36578 -Tttcaagaaatatca-ctctga---gat----a-ta---tgtaatgt
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Piliocolobus_badius.k141_1610110                          38970 34 +     39618 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TATTGCTT
i Piliocolobus_badius.k141_1610110                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                        346 34 -     17985 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TATTGCTT
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26738191 34 +  26888534 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TATTGCTT
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pithecia_albicans.k141_991845                             41838 34 -     61926 TGTTCAGGAAATGTCA-TCCC-T---AA-----A-TA---TATTGCTT
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        23267 34 +     78826 TGTTCAGGAAATGTCA-TCCC-T---AA-----A-TA---TATTGCTT
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              7218 34 -     15800 TGTTCAGGAAATGTCA-TCCC-T---AA-----A-TA---TATTGCTT
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        10416 34 -     16101 TGTTCAGGAAATGTCA-TCCC-T---AA-----A-TA---TATTGCTT
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          3725 34 +      9673 TGTTCAGGAAATGTCA-TCCC-T---AA-----A-TA---TATTGCTT
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13472719 34 -  19735023 TGTTCAGGAAATGTCA-TCCC-T---AA-----A-TA---TATTGCTT
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           11627 34 -     31692 TGTTCAGGAAATGTCA-TCCC-T---AA-----A-TA---TATTGCTT
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       21063 34 +     44506 TGTTCAGGAAATGTCA-TCCC-T---AC-----A-TA---TATAGCTT
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        21273 34 +     67491 TGTTCAGGAAATGTCA-TCCC-T---AC-----A-TA---TATAGCTT
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      11514 34 -     98129 TGTTCAGGAAATGTCA-TCCC-T---AC-----A-TA---TATAGCTT
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     21119 34 +    147771 TGTTCAGGAAATGTCA-TCCT-T---AC-----A-TA---TATAGCTT
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        21368 34 -     23762 TGTTCAGGAAATGTCA-TCCC-T---AC-----A-TA---TATAGCTT
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          1835 34 -     55515 TGTTCAGGAAATGTCA-TCCC-T---AC-----A-TA---TATAGCTT
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         21188 34 +    152463 TGTTCAGGAAATGTCA-TCCC-T---AC-----A-TA---TATAGCTT
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      7948 34 +      8943 TGTTCAGGAAATGTCA-TCCC-T---AC-----A-TA---TATAGCTT
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                         10908 34 +    134592 TGTTCAGGAAATGTCA-TCCT-T---AC-----A-TA---TATAGCTT
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          21498 34 -     75465 TGTTCAGGAAATGTCA-TCCC-T---AC-----A-TA---TATAGCTT
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              185402 34 -    373494 TGTTCAGGAAATGCCA-GCCT-T---AA-----G-TG---GATTGCTT
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19805310 34 +  19899266 tgttcaggaaatgcca-gccc-t---aa-----g-tg---gattgctt
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               3449 34 -     15069 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TATTGCTT
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              3583 34 +     14865 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TATTGCTT
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    666102 34 -   2312742 AGTTGAGaaaatgcca-cccc-a---aa-----a-ta---tactgcTT
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         1932 34 +     11805 agttgagaaaatgcca-cccc-a---aa-----a-ta---tactgctt
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           41267 34 +     52369 agttgagaaaatgcca-cccc-a---aa-----a-ta---tactgctt
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         33656 34 -     44753 agttgagaaaatgcca-cccc-a---aa-----a-ta---tactgctt
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            15577 34 +     27322 agttgagaaaatgcca-cccc-a---aa-----a-ta---tactgctt
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       15216 34 -     53241 agctgagaaaatgcca-cccc-a---aa-----a-ta---tactgctt
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         37487 34 -     48185 agttgagaaaatgcca-cccc-a---aa-----a-ta---tactgctt
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           31859 34 +     77221 agtctaggaagtatca-cccc-a---aa-----a-ta---tggtacta
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pygathrix_cinerea.k141_374971                             27574 34 +     56732 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TATTGCTT
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6804065 34 +   6970761 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TATTGCTT
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             3459 34 +     18040 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TATTGCTT
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rattus_norvegicus.chr11                                13913808 34 +  90463843 agtccagaaagtgtca-cccc-a---aa-----a-tg---tggtacta
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinopithecus_bieti.k119_102124                           14011 34 -     14454 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TATTGCTT
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206375337 34 - 206558726 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TATTGCTT
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44852985 34 -  45163003 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TATTGCTT
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15670937 34 -  43202129 AGTTCAGGAAATgcca-tttc-t---aa-----a-ta---tattgcTT
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        2803 34 +     34089 AGTTCAGGAAATACTA-TTTC-T---AA-----A-TA---TATTGCTT
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              2744 34 -     60842 AGTTCAGGAAATACTA-TTTC-T---AA-----A-TA---TATTGCTT
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              2839 34 +     67014 AGTTCAGGAAATACTA-TTTC-T---AA-----A-TA---TATTGCTT
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              2817 34 +     60816 AGTTCAGGAAATACTA-TTTC-T---AA-----A-TA---TATTGCTT
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 2754 34 -     76454 AGTTCAGGAAATACTA-TTTC-T---AA-----A-TA---TATTGCTT
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17339509 34 -  30362882 AGTTCAGGAAATGCCA-TTCC-T---AA-----A-TA---TATTTCTT
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         18884 34 -     62485 AGTTCAGGAAATGCCA-TTCC-T---AA-----A-TA---TATTGCTT
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Semnopithecus_entellus.k141_1527475                       26001 34 +     26421 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TATTGCTT
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       6461 34 +     20762 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TATTGCTT
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         40196 34 +     40653 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TATTGCTT
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                           10753 34 -     12194 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TATTGCTT
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     24175 34 -     27512 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TATTGCTT
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         33190 34 -     33692 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TATTGCTT
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   98034 34 -    120886 aattgcaaaggtgtta-tccc-a---aa-----a-ta---tggtgtta
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2238321 13 +   2842873 AGTTCAGGAAAAG-----------------------------------
i Spermophilus_dauricus.KZ294190.1                      C 0 I 10
s Symphalangus_syndactylus.tarseq_24                        13128 34 -  13920577 tgctcaggaaatgcca-gccc-t---ga-----g-tg---gattgctt
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tarsius_lariang.k141_609102                               24840 34 +     42269 agtttagaaaatgcca-cccc-a---ag-----a-ta---tactgctc
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               58156 34 +     65473 agtttagaaaatgcca-cccc-a---ag-----a-ta---tactgctc
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194005493 34 - 194193292 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TATTGCTT
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             37669 39 -     47444 -gttcaagaaatatca-ccctga---aatatgta-ta---tataattt
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Trachypithecus_auratus.k141_738098                        24571 34 +     38948 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TATTACTT
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   18298 34 -     32910 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TATTGCTT
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       24196 34 +     24652 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TATTACTT
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      3074 34 -      3559 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TATTGCTT
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           41018 34 -     54611 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TATTGCTT
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       17019 34 +     17312 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TATTACTT
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    24382 34 -     25040 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TATTGCTT
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          3043 34 +      3528 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TATTGCTT
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  49410 34 +     51589 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TATTGCTT
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       12586 34 +     14732 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TATTGCTT
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       3063 34 -     28054 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TATTGCTT
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44657858 34 -  44834318 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TATTGCTT
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        2867 34 +      3372 TGTTCAGGAAATGCCA-GCCC-T---AA-----A-TG---TATTGCTT
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tupaia_chinensis.KB320831.1                             2791017 33 -   3938065 aattttttaaatgtca-tt-c-a---aa-----a-ta---ttctcttt
i Tupaia_chinensis.KB320831.1                           I 263 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    3277 34 +     13056 AATTTTTTAAatgccactt-c-a---aa-----a-ta---ttcttttt
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Varecia_rubra.k141_432109                                  3624 34 -     20643 agttcagaaaatgcca-cccc-a---aa-----a-ta---tactgctt
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             23166 34 -     33872 agttcagaaaatgcca-cccc-a---aa-----a-ta---tactgctt
i Varecia_variegata.k141_775891                         C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       125413 13 -    134049 AATTCAGGAAAAG-----------------------------------
i Xerus_inauris.XerIna_scaffold_7898                    C 0 I 10
s Zapus_hudsonius.ZapHud_scaffold_64392                     13631 34 -     20485 ggttctggaagttcta-accc-a---aa-----a-tg---tgccccca
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
e Eptesicus_fuscus.JH977687.1                             4702558 570 +   6522550 T
e Macroglossus_sobrinus.MacSob_scaffold_879                700405 588 +    802869 T
e Sorex_araneus.JH798170.1                               17749433 999 -  27805282 T
e Erinaceus_europaeus.JH835290.1                         11531295 619 +  16010500 T
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           1627  0 -      6963 C
e Suricata_suricatta.SurSur_flattened_line_20339            25749 587 +     62062 T
e Chrysochloris_asiatica.ChrAsi_scaffold_141308              8820 2035 -     12508 T
e Ziphius_cavirostris.ZipCav_flattened_line_127025           5743 596 -      8775 T
e Zalophus_californianus.ZalCal_flattened_line_4097        212466 605 -    227762 T
e Vulpes_lagopus.VulLag_flattened_line_2045                135938 606 -    281493 T
e Vicugna_pacos.KN269600.1                                1523470 590 -   2331223 T
e Ursus_maritimus.KK498671.1                              6513003 615 +  28682327 T
e Uropsilus_gracilis.UroGra_scaffold_139357                   696  0 +      2103 C
e Tursiops_truncatus.MRVK01000923.1                      69312246 595 -  96451834 T
e Trichechus_manatus.JH594618.1                          16081379 1856 +  31416278 T
e Tragulus_javanicus.TraJav_scaffold_14717                   4003 576 +     90398 T
e Tonatia_saurophila.TonSau_scaffold_3334                  134662 575 -    259118 T
e Tolypeutes_matacus.TolMat_scaffold_269431                  4396 2563 +      6782 T
e Tapirus_terrestris.TapTer_scaffold_14939                  56190 591 +     99546 T
e Tapirus_indicus.TapInd_scaffold_176                      805530 592 +   1148477 T
e Tamandua_tetradactyla.TamTet_scaffold_26877               13539 590 +     45698 T
e Tadarida_brasiliensis.TadBra_scaffold_145589               4581 564 -      6213 T
e Sus_scrofa.CM000824.4                                 189270675 604 + 218635234 T
e Spilogale_gracilis.SpiGra_flattened_line_905             233196 596 -    276980 T
e Solenodon_paradoxus.SolPar_flattened_line_1012            16792 573 +    739146 T
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   30171 591 -    114521 T
e Saiga_tatarica.SaiTat_scaffold_82192                       6411 583 +     12214 T
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                18082 592 +    109198 T
e Rhinolophus_sinicus.LVEH01000179.1                      1786602 584 +   2252614 T
e Rangifer_tarandus.RanTarSib_scaffold_24239                14609 588 +     68503 T
e Puma_concolor.QAVW01000427.1                          131532510 588 - 161321710 T
e Pteropus_vampyrus.KN525959.1                             602742 594 -   3946241 T
e Pteropus_alecto.KB031157.1                             13244792 595 -  17261082 T
e Pteronura_brasiliensis.PteBra_flattened_line_1343        244445 611 -    344369 T
e Pteronotus_parnellii.KE867983.1                            2652 575 -     27784 T
e Procavia_capensis.ProCapCap_scaffold_15315                76241 2096 +     78963 T
e Platanista_gangetica.PlaMin_flattened_line_72990           4214 597 +     21690 T
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            95634 565 +    112873 T
e Phocoena_phocoena.PhoPho_flattened_line_11948            120146 597 -    122454 T
e Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113863 604 -    135482 T
e Pantholops_hodgsonii.KE114631.1                         1064955 574 -   1292953 T
e Panthera_tigris.KE721879.1                              5025928 588 -   6340057 T
e Panthera_pardus.KV860323.1                              3636281 589 +  18214204 T
e Panthera_onca.PanOnc_flattened_line_1615                  32547 588 +    295523 T
e Ovis_canadensis.OviCan_scaffold_6251                      77308 574 +    140051 T
e Ovis_aries.CM001582.2                                 134076094 574 - 275406953 T
e Otocyon_megalotis.JAEUCK010005121.1                      305865 601 -    505867 T
e Orycteropus_afer.OryAfe_flattened_line_13509              43235 1921 -     66828 T
e Orcinus_orca.KB316965.1                                 7223529 597 -   7562323 T
e Okapia_johnstoni.LVCL01S0017931.1                         35827 729 +     78940 T
e Odocoileus_virginianus.KZ101650.1                       1078532 589 +   1425656 T
e Odobenus_rosmarus.KB229369.1                             677731 600 -   3126709 T
e Nyctereutes_procyonoides.CAJHUB010000786.1                28531 606 +   3668941 T
e Noctilio_leporinus.NocLep_scaffold_12062                  48091 568 +     94413 T
e Neophocaena_asiaeorientalis.KZ688543.1                  3949845 597 -   4490290 T
e Neomonachus_schauinslandi.NINY01007774.1                4483086 611 -  14209539 T
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3864 589 -      8794 T
e Myotis_myotis.MyoMyo_scaffold_6123                         8970 569 +     66751 T
e Myotis_lucifugus.GL429887.1                             3463776 570 -   3747815 T
e Myotis_davidii.KB114863.1                               5017879 569 +   6462685 T
e Myotis_brandtii.KE161952.1                               966190 571 +   8389877 T
e Mustela_putorius.JH417978.1                             4422351 610 -  28371801 T
e Murina_feae.MurFea_scaffold_2254                          17865 566 -    100666 T
e Mungos_mungo.MunMun_flattened_line_8729                  143083 585 -    168139 T
e Moschus_moschiferus.MosMos_scaffold_146101                 3404 589 -      4346 T
e Mormoops_blainvillei.MorMeg_scaffold_2952                159984 578 +    265003 T
e Monodon_monoceros.MonMon_M_scaffold_5598                 145232 596 +    154973 T
e Mirounga_angustirostris.MirAng_flattened_line_8852         9694 818 -    104932 T
e Miniopterus_schreibersii.MinSch_scaffold_24116            32901 573 +     45743 T
e Miniopterus_natalensis.LDJU01000022.1                   8208229 572 +  10048721 T
e Micronycteris_hirsuta.MicHir_scaffold_37978               21478 582 -     32043 T
e Microgale_talazaci.MicTal_scaffold_34660                  30484 1282 -     48017 T
e Mesoplodon_bidens.MesBid_scaffold_183284                   2166 255 +      2166 T
e Mellivora_capensis.MelCap_flattened_line_146202             779 605 -      1999 T
e Megaderma_lyra.MegLyr_scaffold_3562                       63204 732 -    234502 T
e Manis_pentadactyla.KN017078.1                             34979 596 +     58827 T
e Manis_javanica.JSZB01003966.1                            144904 595 +    252755 T
e Lycaon_pictus.CM007556.1                               11085538 606 +  39895028 T
e Loxodonta_africana.GL010040.1                          20590917 1859 -  62548349 T
e Lipotes_vexillifer.KE558548.1                            134797 598 +   3060487 T
e Leptonychotes_weddellii.KB714749.1                      3084186 615 -   3498232 T
e Lasiurus_borealis.LasBor_scaffold_5102                   112354 573 -    115756 T
e Kogia_breviceps.KogBre_flattened_line_35920               22464 592 +     37189 T
e Inia_geoffrensis.IniGeo_flattened_line_66725               7632 591 +     17520 T
e Hyaena_hyaena.HyaHya_flattened_line_20729                 14487 630 -     67322 T
e Hipposideros_galeritus.HipGal_scaffold_104691              6355 566 -      9143 T
e Hipposideros_armiger.JXIK01001085.1                      277196 565 -    477199 T
e Hippopotamus_amphibius.HipAmp_scaffold_1308              145879 587 +    277961 T
e Heterohyrax_brucei.HetBruBak_scaffold_25354               56377 2096 +     73687 T
e Hemitragus_hylocrius.HemHyl_scaffold_16669                26300 573 -     91191 T
e Helogale_parvula.HelPar_flattened_line_22962              15392 589 +     53719 T
e Giraffa_tippelskirchi.LVKQ01S012154.1                    180102 874 -    189561 T
e Felis_nigripes.FelNig_flattened_line_8080                 19352 584 +     52776 T
e Felis_catus_fca126.CM031420.1                         129278217 584 - 158578461 T
e Eubalaena_japonica.EubJap_flattened_line_7756             60304 620 +     89355 T
e Eschrichtius_robustus.EscRob_flattened_line_685          313850 596 +    330699 T
e Equus_przewalskii.ATBW01073585.1                          11740 861 +     92910 T
e Equus_caballus.CM000402.2                              13350250 861 +  41866177 T
e Equus_asinus.JREZ01000062.1                             5851747 860 -   7175178 T
e Enhydra_lutris.KZ291749.1                              85869969 610 +  99434291 T
e Elephantulus_edwardii.JH947210.1                        7805914 1445 +  15467074 T
e Elaphurus_davidianus.JRFZ01086400.1                     1490302 589 +   1727528 T
e Eidolon_helvum.KE772537.1                                 10991 592 +     24177 T
e Echinops_telfairi.JH980316.1                           22994071  0 -  44670279 C
e Diceros_bicornis.DicBicMic_scaffold_9545                   1977 1182 +    151128 T
e Dicerorhinus_sumatrensis.PEKH010003161.1                 321325 1172 +    993696 T
e Desmodus_rotundus.KZ672188.1                           18697602 573 -  18957592 T
e Delphinapterus_leucas.KZ290064.1                       80035644 592 -  96802777 T
e Dasypus_novemcinctus.JH568778.1                          182464 2581 -   6883506 T
e Cryptoprocta_ferox.CryFer_flattened_line_19014            50184 590 -     70449 T
e Crocidura_indochinensis.CroInd_scaffold_38409             18475 566 -     19186 T
e Craseonycteris_thonglongyai.CraTho_scaffold_22679         38414 982 -     40477 T
e Condylura_cristata.JH655880.1                          60611428 454 +  78930452 T
e Choloepus_hoffmanni.KN194586.1                           760580 596 +    964067 T
e Choloepus_didactylus.ChoDid_scaffold_36182                15269 596 -     21363 T
e Ceratotherium_simum_cottoni.CerCot_scaffold_160623         2430 1181 -      9338 T
e Catagonus_wagneri.CatWag_scaffold_1305                   157578 564 -    276539 T
e Carollia_perspicillata.CarPer_scaffold_4436               58293 574 +     67245 T
e Capra_hircus.CM004562.1                               135705256 574 - 157403528 T
e Capra_aegagrus.CM003214.1                              21324029 574 + 157394656 T
e Canis_lupus_orion.HG994411.1                           16453106 606 -  44759192 T
e Canis_lupus_familiaris.chr31                           11086082 606 +  39895921 T
e Canis_lupus_dingo.QKWQ01001993.1                       11263553 606 -  35597290 T
e Canis_lupus_VD.CanFam_VD_scaffold_16982                   11910 606 +     87036 T
e CanFam4.chr31                                          11516892 606 +  39901454 T
e Camelus_ferus.KB016973.1                                2971801 593 +   6889770 T
e Camelus_dromedarius.KN271192.1                           396068 594 -  15254737 T
e Camelus_bactrianus.KN276303.1                           3218363 593 -   8989139 T
e Bubalus_bubalis.KI419065.1                              1229773 588 -   1914593 T
e Bos_taurus.CM000177.6                                 136294018 589 - 158972876 T
e Bos_mutus.JH883513.1                                     570659 589 -    998990 T
e Bos_indicus.CM003021.1                                138138285 589 - 161108492 T
e Bison_bison.KN264915.1                                  6558046 589 +   6870073 T
e Beatragus_hunteri.BeaHun_scaffold_21644                   42015 569 -     72089 T
e Balaenoptera_bonaerensis.DF502048.1                        4197 598 -     13118 T
e Balaenoptera_acutorostrata.KI537095.1                  26378965 597 +  51448160 T
e Artibeus_jamaicensis.ArtJam_scaffold_41619                 7496 576 -     29036 T
e Antilocapra_americana.AntAmePen_scaffold_42841            29534 583 +     33004 T
e Anoura_caudifer.AnoCau_scaffold_422                      389095 570 -    631301 T
e Ammotragus_lervia.NIVO01013474.1                        3518953 602 +   4113121 T
e Ailurus_fulgens.LNAC01000003.1                          7092441 814 -  16596857 T
e Ailuropoda_melanoleuca.LNAT01000321.1                  10655516 614 +  23371972 T
e Acinonyx_jubatus.LLWD01000356.1                         2032169 587 +   3721120 T
e Prolemur_simus.MPIZ01000048.1                           6846762  1 +  12164890 I
e Piliocolobus_kirkii.k141_557609                           19957 700 +     19957 T
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65667885  0 +  89412551 C
e Nycticebus_coucang.k141_2051882                            2265  0 +      6470 C
e Nycticebus_bengalensis.LG16                            65565537  0 -  95554990 C
e Macaca_tonkeana.k141_2870633                               2864 158 -     27140 T
e Macaca_nigra.k141_282495                                   2859 158 -     46448 T
e Macaca_maura.k141_251854                                  43912 158 -     79256 T
e Lemur_catta.scaffold_1                                258405386  1 - 285822530 I
e Hapalemur_occidentalis.k141_797938                        43697  1 -     54384 I
e Hapalemur_meridionalis.k141_186231                        27103  1 -     42470 I
e Hapalemur_griseus.k141_1387522                             3826  1 +     56096 I
e Hapalemur_gilberti.k141_97962                             26366  1 +     26611 I
e Hapalemur_alaotrensis.k141_1198205                         3890  1 +      3980 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               10149 38 +    209709 tg-g-tgtactg-attacattgaactgaa-aata-tt--tgaa-a-a
s Acomys_cahirinus.AcoCah_scaffold_1625                    110886 38 -    189883 tg-a-tgcacaa-actacttccacctgaa-aaca-tt--ttta-a-a
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   11331 37 -     22067 -g-ggcacatga-atgaattctaactaa--g--a-cttttgaa-a-a
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_3103728                    247 38 +      1665 TG-G-TGTACTG-ATTACATCAAACTGAA-AATA-TG--TGAA-A-A
i Allenopithecus_nigroviridis.k141_3103728              n 38 I 645
s Allochrocebus_lhoesti.k141_4825038                        52975 38 +     53391 TG-G-TGTACTG-ATTACATCAAACTGAA-AATA-TG--TGAA-A-A
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         3700 38 +     72529 TG-G-TGTACTG-ATTACATCAAACTGAA-AATA-TG--TGAA-A-A
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          3275 38 +      3797 TG-G-TGTACTG-ATTACATCAAACTGAA-AATA-TG--TGAA-A-A
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             8421 38 -     18050 TG-G-TATACTG-ATTACACTGAACTGAA-AATA-TG--TGAA-A-A
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  9534 38 -     11521 tg-g-tatactg-attacactgaactgaa-aata-tg--tgaa-a-a
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              9098 38 -     21359 TG-G-TATACTG-ATTACACTGAACTGAA-AATA-TG--TGAA-A-A
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_298055                                  389 38 +      1823 TG-G-TATACTG-ATTACACTGAACTGAA-AATA-TG--TGAA-A-A
i Alouatta_juara.k141_298055                            I 74 I 51
s Alouatta_macconnelli.k141_1331706                          8389 38 -     10438 TG-G-TATACTG-ATTACACTGAACTGAA-AATA-TG--TGAA-A-A
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            5045 38 +      7047 TG-G-TATACTG-ATTACACTGAACTGAA-AATA-TG--TGAA-A-A
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             8330 38 +     10410 TG-G-TATACTG-ATTACACTGAACTGAA-AATA-TG--TGAA-A-A
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            2134 38 -      4927 TG-G-TATACTG-ATTACACTGAACTGAA-AATA-TG--TGAA-A-A
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             5064 38 +      6429 TG-G-TATACTG-ATTACACTGAACTGAA-AATA-TG--TGAA-A-A
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Aotus_azarae.k141_3170768                                 60787 38 +     78111 TG-G-TATACTG-ATTACATTGAACTGAA-AATA-TG--TGAA-A-A
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            3728 38 +     22701 TG-G-TATACTG-ATTACATTGAACTGAA-AATA-TG--TGAA-A-A
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5747685 38 +   9889416 TG-G-TATACTG-ATTACATTGAactgaa-aata-tg--tgaa-a-a
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             4270 38 -    104377 TG-G-TATACTG-ATTACATTGAACTGAA-AATA-TG--TGAA-A-A
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               4276 38 +     23246 TG-G-TATACTG-ATTACATTGAACTGAA-AATA-TG--TGAA-A-A
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     2281 37 +      5067 T--G-CACATTA-ATAACTTCTAATTGAG-GACT-TT--CAAA-A-A
i Aplodontia_rufa.AprRuf_scaffold_156013                I 10 C 0
s Arctocebus_calabarensis.k141_1161114                      16223 23 +     17483 tg-g-tgtactg-ataac-ttaaacca--------------------
i Arctocebus_calabarensis.k141_1161114                  C 0 I 14
s Ateles_geoffroyi_b.tarseq_2582                             9537520 38 +  39197703 TG-G-TATACTG-ATTACACTGAACTGAA-AATA-TG--TGAA-A-A
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             58804 38 +     85812 TG-G-TATACTG-ATTACACTGAACTGAA-AATA-TG--TGAA-A-A
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 9803 38 +     89302 TG-G-TATACTG-ATTACACTGAACTGAA-AATA-TG--TGAA-A-A
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             14308 38 -     58268 TG-G-TATACTG-ATTACACTGAACTGAA-AATA-TG--TGAA-A-A
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             62299 38 +    119057 TG-G-TATACTG-ATTACACTGAACTGAA-AATA-TG--TGAA-A-A
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               4268 38 -     25888 TG-G-TATACTG-ATTACACTGAACTGAA-AATA-TG--TGAA-A-A
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 5040 38 -     16375 tg-g-tatactg-attactttgaagggaa-ggca-tt--tgat-a-a
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              1359 38 +      2719 tg-g-tatactg-attactttgaatggaa-ggca-tt--tgat-a-a
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Cacajao_ayresi.k141_724503                               112158 38 -    171031 TG-G-TATACTG-ATTACACTGAACTGAA-AATA-TG--TGAA-C-A
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 11184 38 +    125063 TG-G-TATACTG-ATTACACTGAACTGAA-AATA-TG--TGAA-C-A
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                13232 38 -    216513 TG-G-TATACTG-ATTACACTGAACTGAA-AATA-TG--TGAA-C-A
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        5772 38 -    134917 TG-G-TATACTG-ATTACACTGAACTGAA-AATA-TG--TGAA-C-A
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Capromys_pilorides.CapPil_scaffold_979108                   386 38 -      1248 gg-g-agtacta-attacttctaactgta-agca-tc--tgaa-a-a
i Capromys_pilorides.CapPil_scaffold_979108             I 34 C 0
s Carlito_syrichta.NW_007248099.1                          307391 38 +    345090 tg-g-tatactg-attactttgaactgaa-gata-tt--tgaa-a-a
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   28843 38 +     33760 tg-a-tacacta-attccttataaatgaa-gaca-tt--tgaa-t-t
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15785000 38 -  24422027 GG-G-AATAATA-ATTACTTCTGGCTGTG-TACA-TT--CAAA-A-A
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15796934 38 -  24440124 GG-G-AATAATA-ATTACTTCTGGCTGTA-TGCA-TT--CAAA-A-A
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       175125 38 +    436027 gg-g-aataata-attacttctggctgta-tgca-tt--caaa-a-a
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18889016 38 -  29618158 TG-G-TATACTG-ATTACATCGAACTGAA-AATA-TG--TGAA-A-A
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 6560 38 -     26817 TG-G-TATACTG-ATTACATCGAACTGAA-AATA-TG--TGAA-A-A
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                10800 38 +     25043 TG-G-TATACTG-ATTACATCGAACTGAA-AATA-TG--TGAA-A-A
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         6424 38 +     21754 tg-g-tataatg-attactttgaactgaa-gaca-tt--tgaa-a-a
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6552959 38 +   6739814 TG-G-TGCACTg-attacatcaaactgaa-aata-tg--tgaa-a-a
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      54436 38 -     54931 TG-G-TGCACTG-ATTACATCAAACTGAA-AATA-TG--TGAA-A-A
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         19420 38 -     19697 TG-G-TGCACTG-ATTACATCAAACTGAA-AATA-TG--TGAA-A-A
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         56951 38 -    107033 TG-G-TGCACTG-ATTACATCAAACTGAA-AATA-TG--TGAA-A-A
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        3391 38 -      3853 TG-G-TGTATTG-ATTCCATCAAACTGAA-AATA-CG--TGAA-A-A
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          27322 38 +     30494 TG-G-TGTACTG-ATTACATCAAACTGAA-AATA-CG--TGAA-A-A
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           3351 38 -      4022 TG-G-TGTACTG-ATTCCATCAAACTGAA-AATA-TG--TGAA-A-A
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          3240 38 -      3505 TG-G-TGTACTG-ATTCCATCAAACTGAA-AATA-TG--TGAA-A-A
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           22028 38 +     35983 TG-G-TGTACTG-ATTCCATCAAACTGAA-AATA-CG--TGAA-A-A
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11988565 38 +  12117833 TG-G-TGTACTG-ATTACATCAAACTGAA-AATA-TG--TGAA-A-A
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46475318 38 +  46592721 TG-G-TGTACTG-ATTACATCAAACTGAA-AATA-TG--TGAA-A-A
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      33147 38 +     33420 TG-G-TGTACTG-ATTACATCAAACTGAA-AATA-TG--TGAA-A-A
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        3181 38 -      3443 TG-G-TGTACTG-ATTACATCAAACTGAA-AATA-TG--TGAA-A-A
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      4179 38 -      4669 TG-G-TGTACTG-ATTCCATCAAACTGAA-AATA-TG--TGAA-A-A
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        3967 38 -      4411 TG-G-TGTACTG-ATTCCATCAAACTGAA-AATA-TG--TGAA-A-A
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         3502 38 -      4205 TG-G-TGTACTG-ATTCCATCAAACTGAA-AATA-TG--TGAA-A-A
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           57344 38 -     68416 tg-g-tatactg-attactttgaatggaa-ggca-tt--tgat-a-a
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            6386 38 +     13308 ta-t-tatactg-attactttgaatggaa-ggca-tt--tgat-a-a
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             3820 38 -     18223 TG-G-TATACTG-ATTACATTGAACTGAA-AATA-TG--TGAA-A-A
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             20843 38 +     25473 TG-G-TATACTG-ATTACATTGAACTGAA-AATA-TG--TGAA-A-A
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           39882 38 +     57117 TG-G-TATACTG-ATTACATTGAACTGAA-AATA-TG--TGAA-A-A
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          44557 38 +     54541 TG-G-TATACTG-ATTACATTGAACTGAA-AATA-TG--TGAA-A-A
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15960152 38 +  43084221 gg-g-aatacta-attatttctaactgca-agca-tt--tgag-a-a
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         69367 38 +    196370 TG-G-TATACTG-ATTACACTGAACTGAA-AATA-TG--TGAA-A-A
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          13547 38 +     40510 TG-G-TATACTG-ATTACACTGAACTGAA-AATA-TG--TGAA-A-A
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15136786 38 -  15256731 TG-G-TGTACTG-ATTACATCAAACTGAA-AATA-TG--TGAA-A-A
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      31832 38 -     53260 TG-G-TGTACTG-ATTACATCAAACTGAA-AATA-TG--TGAA-A-A
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101142281 38 + 101219884 TG-G-TGTACTG-ATTACATCAAActgaa-aata-tg--tgaa-a-a
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10887567 38 +  10971483 TG-G-TGTACTG-ATTATATCGAactgaa-aata-tg--tgaa-a-a
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147662320 38 + 156195979 TG-G-TGTACTG-ATTATATCGAACTGAA-AATA-TG--TGAA-A-A
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            14310 38 +     23629 TG-G-TGTACTG-ATTATATCGAACTGAA-AATA-TG--TGAA-A-A
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 276776 23 -    399297 ------------------taccaactgat-gaca-tt--taaa-a-a
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53027408 38 +  72327488 tg-g-tacacaa-attacttccaactgaa-gata-tt--ttaa-a-a
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  206563 39 -    956709 tg-a-aatacta-attacttctacgtcaa-ggca-ttt-tgac-t-a
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 29106 38 -     67205 GG-G-AGTACAA-ATTACTTCTAACTGTA-AGTG-TC--TGAA-A-A
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                16155 38 +     26546 gg-g-agtacta-attacttctaactgta-tgcg-tt--cgaa-a-a
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             57257 38 -    236241 gg-a-aatacta-attacttctaactata-ttca-tt--tgaa-a-g
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16843201 38 +  31942871 tg-g-tatactg-attactttgaactgaa-ggca-tc--tgat-t-a
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   156044 38 +    228994 gg-g-aatacta-attacttccaagtatg-agca-tt--tgaa-a-a
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3653761 34 +   4240102 TG-G-TACACTA-----CTCCTAAATAAa-ggtg-ta--ttaa-a-a
i Dipodomys_ordii.KN672545.1                            C 0 I 261
s Dipodomys_stephensi.DipSte_scaffold_44365                 25324 34 +     28912 TG-G-TACACTA-----CTCCTAAATAAA-GGTG-TA--TTAA-A-A
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 I 303
s Dolichotis_patagonum.DolPat_scaffold_14102                34508 38 -     73477 gg-g-aataata-attacttctaactgta-taca-tt--caaa-a-a
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        238060 38 -    369425 tg-g-tacacaa-attacttccaactgaa-gaca-tt--tcaa-a-a
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           5076 38 -      7838 tg-g-tacaaaa-attacttccaactgaa-gaca-tt--tcaa-a-a
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Erythrocebus_patas.Contig8                             48768964 38 -  48907691 TG-G-TGTACTG-ATTACATCAAACTGAA-AATA-CG--TGAA-A-A
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eulemur_albifrons.k141_715837                              3386 38 +     13586 tg-g-tatactg-attactttgaatggaa-ggca-tt--tgat-a-a
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               3321 38 -      6809 tg-g-tatattg-attactttgaatggaa-ggca-tt--tgat-a-a
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             9796 38 +     36558 tg-g-tatattg-attactttgaatggaa-ggca-tt--tgat-a-a
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             6112 38 +     60246 tg-g-tatactg-attactttgaatggaa-ggca-tt--tgat-a-a
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 9594 38 +    109717 tg-g-tatattg-attactttgaatggaa-ggca-tt--tgat-a-a
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               13974 38 +     16540 tg-g-tatactg-attactttgaatggaa-ggca-tt--tgat-a-a
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                14249 38 +     27497 tg-g-tatattg-attactttgaatggaa-ggcg-tt--tgat-a-a
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           16706 38 +     26808 tg-g-tatactg-attactttgaatggaa-ggca-tt--tgat-a-a
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                31439 38 +     46535 tg-g-tatactg-attactttgaatggaa-ggca-tt--tgat-a-a
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              14162 38 -     29447 tg-g-tatactg-attactttgaatggaa-ggca-tt--tgat-a-a
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Fukomys_damarensis.KN123630.1                          13891104 38 -  19261668 gt-g-gatacta-attccttctaactgta-agca-tc--tcca-a-a
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     209299 37 -    847004 tg-g-tgtactg-acaac-ttgatcgaga-ggca-tc--tgat-a-a
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           11678 37 -     43889 tg-g-tgtactg-acaac-ttgaacgaga-ggca-tc--tgat-a-a
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           8746 37 +     27357 tg-g-tgtactg-acaac-tccaacgaga-ggca-tc--tgat-a-a
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               154657 38 +    324696 tg-c-tatactg-attacttccaactgaa-ggca-tt--tgaa-a-a
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           11056 35 -     18683 t--g---tagta-actgcttcaaattgaa-gtca-tt--tgaa-g-a
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               3548 38 -     14630 tg-g-tgtactg-attacatcgaactgaa-aata-tt--tgaa-a-a
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119650647 38 - 195582420 tg-g-tgtactg-attacatcgaactgaa-aata-tt--tgaa-a-a
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   75795 37 +    118900 t--g-tgtagta-attgtttcaaactgaa-gaca-tt--tgaa-g-a
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2549494 38 +  31725842 gg-g-gatacta-attacttttaactgtt-agca-tt--tcca-a-a
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Hoolock_leuconedys.ctg2405                                   13580 38 -     15084 tg-g-tgtactg-attacatcgaactgaa-aata-ct--tgaa-a-a
i Hoolock_leuconedys.ctg2405                               I 241 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           17419 38 -    119109 GG-G-AATAATA-ATTACTTCTAACTGTG-TACC-TT--CAAA-A-A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              3546 26 +      5897 TG-A-TACACTG-CAGATTTAGAACTGAA------------------
i Hylobates_abbotti.k141_493872                         I 220 I 7
s Hylobates_agilis.k141_624065                                410 26 +      2112 TG-A-TTCACTG-CAGATTTAGAACTGAA------------------
i Hylobates_agilis.k141_624065                          I 186 I 7
s Hylobates_klossii.k141_466549                              9986 26 +     11537 TG-A-TACACTG-CAGATTTAGAACTGAA------------------
i Hylobates_klossii.k141_466549                         I 182 I 7
s Hylobates_pileatus_b.ContigUN                                 14623091 26 -  25970782 TG-A-TACACTG-CAGATTTAGAACTGAA------------------
i Hylobates_pileatus_b.ContigUN                                I 186 I 7
s Hylobates_muelleri.k141_1389047                             347 26 -      2977 TG-A-TACACTG-CAGATTTAGAACTGAA------------------
i Hylobates_muelleri.k141_1389047                       I 186 I 7
s Hylobates_pileatus_a.tarseq_592                             32478 26 -     60944 TG-A-TACACTG-CAGATTTAGAACTGAA------------------
i Hylobates_pileatus_a.tarseq_592                         I 186 T 729
s Hystrix_cristata.HysCri_scaffold_50788                     4547 38 +     22540 gg-g-gatgcta-attacgtctaactgta-gaca-tt--tgca-a-a
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7124427 31 +  13083262 t-ag-cata--------cttctaattgag-ggca-ct--tgaa-a-a
i Ictidomys_tridecemlineatus.JH393315.1                 I 10 I 7
s Indri_indri.k141_1884019                                   1633 38 -      2196 tg-g-tatacta-attactttgaatggaa-ggca-tt--tgat-a-a
i Indri_indri.k141_1884019                              C 0 C 0
s Jaculus_jaculus.JH725517.1                              8564079 36 +  11848649 -g-ggcacatga-aagacttctaactaa-ag--a-ct--tgaa-a-a
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Lagothrix_lagothricha.k141_12968                          48389 38 -    147782 tg-g-tatactg-attacgctgaactgaa-gATA-TG--TGAA-A-A
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        22316 38 +     39228 tg-g-tatactg-attactttgaatggaa-gcca-tt--tgat-a-a
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            51691 38 +     63517 tg-g-tatactg-attactttgaatggaa-gcca-tt--tgat-a-a
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        76935 38 +    116806 tg-g-tgtactg-attactttgaatggaa-gcca-tt--tgat-a-a
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     29955 38 -     33031 tg-g-tatactg-attactttgaatggaa-gcca-tt--tgat-a-a
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    11404 39 +     22452 tg-a-tatgctg-ctaagtgcaaagtgtc-gaca-tt--tgaa-aaa
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lophocebus_aterrimus.ctg55                             19246047 38 +  19376315 TG-A-TGCACTG-ATTACATCAAACTGAA-AATA-TG--TGAA-A-A
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            9042 23 +     84689 tg-g-tgtactg-ataac-ttgaacta--------------------
i Loris_lydekkerianus.k141_550999                       C 0 I 14
s Loris_tardigradus.ctg97                                 3776793 23 +   6799190 tg-g-tgtactg-ataac-ttgaacta--------------------
i Loris_tardigradus.ctg97                               C 0 I 14
s Macaca_arctoides.k141_2201161                             17723 38 +     74745 TG-G-TGTACTG-ATTACATCAAACTGAA-AATA-TG--TGAA-A-A
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12704233 38 +  12821369 TG-G-TGTACTG-ATTACATCAAACTGAA-AATA-TG--TGAA-A-A
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               6329 38 +      6569 TG-G-TGTACTG-ATTACATCAAACTGAA-AATA-TG--TGAA-A-A
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           44631 38 +     63263 TG-G-TGCACTG-ATTACATCAAACTGAA-AATA-TG--TGAA-A-A
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_925451                                  639 38 +     10231 TG-G-TGTACTG-ATTACATCAAACTGAA-AATA-TG--TGAA-A-A
i Macaca_fuscata.k119_925451                            C 0 C 0
s Macaca_leonina.k141_3421209                                2780 38 +      3017 TG-G-TGTACTG-ATTACATCAAACTGAA-AATA-TG--TGAA-A-A
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_mulatta.NC_041755.1                            196033310 38 + 196197964 TG-G-TGTACTG-ATTACATCAAactgaa-aata-tg--tgaa-a-a
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11443416 38 +  11645122 TG-G-TGTACTG-ATTACATCAAactgaa-aata-tg--tgaa-a-a
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_radiata.k141_1580474                                3172 38 -      3617 TG-G-TGCACTG-ATTACATCAAACTGAA-AATA-TG--TGAA-A-A
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 13502 38 -     55006 TG-G-TGTACTG-ATTACATCAAACTGAA-AATA-TG--TGAA-A-A
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43838539 38 +  43892939 TG-G-TGTACTG-ATTACATCAAACTGAA-AATA-TG--TGAA-A-A
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                5761 38 -      5978 TG-G-TGTACTG-ATTACATCAAACTGAA-AATA-TG--TGAA-A-A
i Macaca_thibetana.k99_116940                           C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43435209 38 -  43563597 TG-G-TGCACTG-ATTACATCAAACTGAA-AATA-TG--TGAA-A-A
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4448035 38 -   4543643 TG-G-TGCACTG-ATTACATCAAACTGAA-AATA-TG--TGAA-A-A
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36872262 31 +  64221397 t-ag-cata--------cttctaattgag-ggca-ct--tgaa-a-a
i Marmota_marmota.CZRN01000005.1                        I 10 I 7
s Meriones_unguiculatus.MerUng_scaffold_52233               10342 39 +     15977 tg-g-tacacaa-attacttccaactgaa-gata-tt--ttaaaa-a
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1045147 38 -  26018355 tg-g-tacacaa-attacttccaactgaa-gata-tt--ttaa-a-a
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Microcebus_murinus.CM007691.1                          16508561 38 +  47401472 TG-G-TATACTG-ATTACTTTGAATGgaa-ggca-tt--tgat-a-a
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22818263 38 -  98408828 tg-g-tacacaa-attactttcaactaaa-ggca-tt--tcaa-a-a
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        33864 38 +     34273 TG-G-TGTACTG-ACTACATCAAACTGAA-AATA-TG--TGAA-A-A
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirza_zaza.k141_226143                                     3959 38 +      8497 tg-g-tatactg-attactttgaatggaa-ggca-tt--tgat-a-a
i Mirza_zaza.k141_226143                                C 0 C 0
s Mus_caroli.LT608236.1                                  70764755 38 +  92629107 tg-g-tatgcaa-attacttccaatggaa-agcc-tt--ttac-a-a
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75487791 38 +  98207768 TG-G-TATGCAA-GTTACTTCCAATGGAA-AGGC-TT--TTAA-C-A
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67553979 38 +  89017189 CG-G-TACTCAA-ATTACTTCCAATGGAA-AGCC-AT--GGAA-A-A
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74328971 38 +  97876770 TG-G-TACGCAA-GTTACTTCCAATggaa-aggc-tt--ttaa-a-a
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              9533 37 +     98495 t--g-tatagtc-attgcttctaaccaaa-ggaa-tt--tgaa-g-a
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     88452 38 -    117718 ga-g-agtacta-attacttccaacccta-agca-tc--tggg-a-a
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Nannospalax_galili.KL201303.1                            116599 19 +    362372 ----------------------Aactgaa-gaca-tt--taaa-a-a
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               6239 38 +     48152 AG-G-TGTACTG-ATTACATCGAACTGAA-AATA-TG--TGAA-A-A
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Nomascus_annamensis.k141_302224                             209 38 +      1516 tg-g-tgtactg-attacatcgaactgaa-aata-tt--tgaa-a-a
i Nomascus_annamensis.k141_302224                       C 0 C 0
s Nomascus_concolor.k141_49591                               1330 38 +      2014 tg-g-tgtactg-attacatcgaactgaa-aata-tt--tgaa-a-a
i Nomascus_concolor.k141_49591                          C 0 C 0
s Nomascus_gabriellae.k141_642452                             255 38 +      2851 tg-g-tgcactc-attacatcgaactgaa-aata-tt--tgaa-a-a
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             23170 38 -  18771707 tg-g-tgcactg-attacatcgaactgaa-aata-tt--tgaa-a-a
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                   883 38 +      4512 tg-g-tgcactg-attacatggaactgaa-aata-tt--tgaa-a-a
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Ochotona_princeps.JH802095.1                            4994385 38 -  23139505 tg-g-tatgctg-ataagtgcaaagtata-gata-tt--tgaa-a-a
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3683949 38 +  10294119 gg-g-agtacta-attacttctaactgta-agca-tc--taaa-a-a
i Octodon_degus.JH651621.1                              C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  123531 38 +    145789 tg-g-tacacaa-attacttacaactgaa-gaca-tt--tcaa-a-a
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  35291 30 +     62360 ----------aa-attacttccaactaga-gaca-tt--gtaa-a-a
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141874039 38 + 163896628 tg-a-tatgttg-ctaagtacaaagtgta-gaca-tt--tgaa-a-a
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       37389 37 +     38679 tg-g-tgtactg-acaac-ttgaaggaga-ggca-tc--tgat-a-a
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18006831 22 -  38779656 TG-G-TGTACTG-ACAAC-TTGAATG---------------------
i Otolemur_garnettii.GL873528.1                         C 0 I 5
s Pan_paniscus.CM003386.1                               127572892 38 - 205426864 TG-G-TGTACTG-ATTACATCgaactgaa-aata-tt--tgaa-a-a
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120150045 38 - 196562556 TG-G-TGTACTG-ATTACATCgaactgaa-aata-tt--tgaa-a-a
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Papio_anubis.CM001492.2                               188153991 38 - 188283584 TG-A-TGCACTG-ATTACATCAAactgaa-aata-tg--tgaa-a-a
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            50203 38 +     76494 TG-A-TGCACTG-ATTACATCAAACTGAA-AATA-TG--TGAA-A-A
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47511388 38 +  47705337 TG-A-TGCACTG-ATTACATCAAACTGAA-AATA-TG--TGAA-A-A
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 65365 38 -    104429 TG-A-TGCACTG-ATTACATCAAACTGAA-AATA-TG--TGAA-A-A
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  15156 38 -     29451 TG-A-TGCACTG-ATTACATCAAACTGAA-AATA-TG--TGAA-A-A
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                35559 38 +     35859 TG-A-TGCACTG-ATTACATCAAACTGAA-AATA-TG--TGAA-A-A
i Papio_ursinus.k141_3762866                            C 0 C 0
s Perodicticus_ibeanus.k141_117958                           3432 23 -     23713 tg-g-tgtactg-ataac-ttgaacca--------------------
i Perodicticus_ibeanus.k141_117958                      C 0 I 14
s Perodicticus_potto.k141_713187                            22730 23 -     27972 tg-g-tgtactg-ataac-ttgaacca--------------------
i Perodicticus_potto.k141_713187                        C 0 I 14
s Perognathus_longimembris.PerPac_flattened_line_22291      41328 34 -     45160 TA-G-TTCACTA-----TCCCTAAATAAA-TATA-TC--TTTA-A-A
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 I 273
s Peromyscus_maniculatus.KI615518.1                       4948475 38 -   8017169 tg-g-aactcaa-attacttccaactgga-gaca-tt--gtaa-a-a
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    10647 38 -     36578 gg-a-gatatta-atttcttctaactata-agca-tt--tgaa-c-a
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Piliocolobus_badius.k141_1610110                          39004 38 +     39618 TG-G-TGTACTG-ATTATATCGAACTGAA-AATA-TG--TGAA-A-A
i Piliocolobus_badius.k141_1610110                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                        380 38 -     17985 TG-G-TGTACTG-ATTATATCGAACTGAA-AATA-TG--TGAA-A-A
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26738225 38 +  26888534 TG-G-TGTACTG-ATTATATCGAActgaa-aata-tg--tgaa-a-a
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pithecia_albicans.k141_991845                             41872 38 -     61926 TG-G-TATACTG-ATTACACTGAACTGAA-AATA-TG--TGAA-A-A
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        23301 38 +     78826 TG-G-TATACTG-ATTACACTGAACTGAA-AATA-TG--TGAA-A-A
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              7252 38 -     15800 TG-G-TATACTG-ATTACACTGAACTGAA-AATA-TG--TGAA-A-A
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        10450 38 -     16101 TG-G-TATACTG-ATTACACTGAACTGAA-AATA-TG--TGAA-A-A
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          3759 38 +      9673 TG-G-TATACTG-ATTACACTGAACTGAA-AATA-TG--TGAA-A-A
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13472753 38 -  19735023 TG-G-TATACTG-ATTACACTGAACTGAA-AATA-TG--TGAA-A-A
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           11661 38 -     31692 TG-G-TATACTG-ATTACACTGAACTGAA-AATA-TG--TGAA-A-A
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       21097 38 +     44506 TG-G-TATACTG-ATTACATTGAACTGAA-AATA-TG--GGAA-A-A
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        21307 38 +     67491 TG-G-TATACTG-ATTACATTGAACTGAA-AATA-TG--TGAA-A-A
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      11548 38 -     98129 TG-G-TATACTG-ATTACATTGAACTGAA-AATA-TG--TGAA-A-A
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     21153 38 +    147771 TG-G-TATACTG-ATTACATTGAACTGAA-AATA-TG--TGAA-A-A
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        21402 38 -     23762 TG-G-TATACTG-ATTACATTGAACTGAA-AATA-TG--TGAA-A-A
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          1869 38 -     55515 TG-G-TATACTG-ATTACATTGAACTGAA-AATA-TG--TGAA-A-A
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         21222 38 +    152463 TG-G-TATACTG-ATTACATTGAACTGAA-AATA-TG--TGAA-A-A
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      7982 38 +      8943 TG-G-TATACTG-ATTACATTGAACTGAA-AATA-TG--TGAA-A-A
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                         10942 38 +    134592 TG-G-TATACTG-ATTACATTGAACTGAA-AATA-TG--TGAA-A-A
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          21532 38 -     75465 TG-G-TATACTG-ATTACATTGAACTGAA-AATA-TG--TGAA-A-A
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              185436 38 -    373494 TG-G-TGTACTG-ATTCCATCgaactgaa-aata-tt--tgaa-a-a
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19805344 38 +  19899266 tg-g-tgtactg-attccatcgaactgaa-aata-tt--tgaa-a-a
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               3483 38 -     15069 AG-G-TGTACTG-ATTACATCGAACTGAA-AATA-TG--TGAA-A-A
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              3617 38 +     14865 AG-G-TGTACTG-ATTACATCGAACTGAA-AATA-TG--TGAA-A-A
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    666136 38 -   2312742 TG-G-TATACTG-ATTACTATGAATggaa-ggca-tt--tgat-a-a
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         1966 38 +     11805 tg-g-tatactg-attactatgaatggaa-ggca-tt--tgat-a-a
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           41301 38 +     52369 tg-g-tatactg-attactatgaatggaa-ggca-tt--tgat-a-a
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         33690 38 -     44753 tg-g-tatactg-attactatgaatggaa-ggca-tt--tgat-a-a
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            15611 38 +     27322 tg-g-tatactg-attactatgaatggaa-ggca-tt--tgat-a-a
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       15250 38 -     53241 tg-g-tatactg-attactatgaatggaa-ggca-tg--tgat-a-a
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         37521 38 -     48185 tg-g-tatactg-attactatgaatggaa-ggca-tt--tgat-a-a
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           31893 39 +     77221 tg-g-tacacaa-attacttccaactgaa-gata-tt--ttaaaa-a
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pygathrix_cinerea.k141_374971                             27608 38 +     56732 AG-G-TGTCCTG-ATTACATCGAACTGAA-AATA-TG--CGAA-A-A
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6804099 38 +   6970761 AG-G-TGTCCTG-ATTACATCGAACTGAA-AATA-TG--CGAA-A-A
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             3493 38 +     18040 AG-G-TGTCCTG-ATTACATCGAACTGAA-AATA-TG--CGAA-A-A
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rattus_norvegicus.chr11                                13913842 38 +  90463843 ca-g-tacgcaa-atctcttccaacttaa-gaca-tt--ttaa-a-a
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinopithecus_bieti.k119_102124                           14045 38 -     14454 AG-G-TGTACTG-ATTACATCGAACTGAA-AATA-TG--TGAA-A-A
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206375371 38 - 206558726 AG-G-TGTACTG-ATTACATCGAactgaa-aata-tg--tgaa-a-a
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44853019 38 -  45163003 AG-G-TGTACTG-ATTACATCGAACTGAA-AATA-TG--TGAA-A-A
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15670971 38 -  43202129 TG-G-TATACTG-ATTACATCGAactgaa-aata-tg--tgaa-a-a
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        2837 38 +     34089 TG-G-TATACTG-ATTACATCGAACTGAA-AATA-TG--TGAA-A-A
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              2778 38 -     60842 TG-G-TATACTG-ATTACATCGAACTGAA-AATA-TG--TGAA-A-A
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              2873 38 +     67014 TG-G-TATACTG-ATTACATCGAACTGAA-AATA-TG--TGAA-A-A
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              2851 38 +     60816 TG-G-TATACTG-ATTACATCGAACTGAA-AATA-TG--TGAA-A-A
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 2788 38 -     76454 TG-G-TATACTG-ATTACATCGAACTGAA-AATA-TG--TGAA-A-A
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17339543 38 -  30362882 TG-G-TATACTG-ATTACATCGAACTGAA-AATA-TG--TGAA-A-A
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         18918 38 -     62485 TG-G-TATACTG-ATTACATCGAACTGAA-AATA-TG--TGAA-A-A
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Semnopithecus_entellus.k141_1527475                       26035 38 +     26421 AG-G-TGTACTG-ATTACATCGAACTGAA-AATA-TG--TGAA-A-A
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       6495 38 +     20762 AG-G-TGTACTG-ATTACATCGAACTGAA-AATA-TG--TGAA-A-A
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         40230 38 +     40653 AG-G-TGTACTG-ATTACATCGAACTGAA-AATA-TG--TGAA-A-A
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                           10787 38 -     12194 AG-G-TGTACTG-ATTACATCGAACTGAA-AATA-TG--TGAA-A-A
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     24209 38 -     27512 AG-G-TGTACTG-ATTACATCGAACTGAA-AATA-TG--TGAA-A-A
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         33224 38 -     33692 AG-G-TGTACTG-ATTACATCGAACTGAA-AATA-TG--TGAA-A-A
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   98068 38 -    120886 tg-g-ttcacaa-attacctccaagtgga-gaca-tt--ttaa-a-a
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2238344 31 +   2842873 T-AG-CATA--------CTTCTAATTGAG-GGCA-Tt--tgaa-a-a
i Spermophilus_dauricus.KZ294190.1                      I 10 I 7
s Symphalangus_syndactylus.tarseq_24                        13162 38 -  13920577 tg-g-tgcactg-attacatcgaactgaa-aata-ct--tgaa-a-a
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tarsius_lariang.k141_609102                               24874 38 +     42269 tg-a-tatactg-attactttgaactgaa-gaca-tt--tgaa-a-a
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               58190 38 +     65473 tg-g-tatactg-attactttgaactgaa-gaca-tt--tgaa-a-a
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194005527 38 - 194193292 TG-G-TGCACTG-ATTACATCAAactgaa-aata-tg--tgaa-a-a
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             37708 20 -     47444 gg-a-gatacta-attacttctg------------------------
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 I 4
s Trachypithecus_auratus.k141_738098                        24605 38 +     38948 AG-G-TGTACTG-ATTACATCGAACTGAA-AATA-TG--TGAA-A-A
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   18332 38 -     32910 AG-G-TGTACTG-ATTACATCGAACTGAA-AATA-TG--TGAA-A-A
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       24230 38 +     24652 AG-G-TGTACTG-ATTACATCGAACTGAA-AATA-TG--TGAA-A-A
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      3108 38 -      3559 AG-G-TGTACTG-ATTACATCGAACTGAA-AATA-TG--TGAA-A-A
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           41052 38 -     54611 AG-G-TGTACTG-ATTACATCGAACTGAA-AATA-TG--TGAA-A-A
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       17053 38 +     17312 AG-G-TGTACTG-ATTACATCGAACTGAA-AATA-TG--TGAA-A-A
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    24416 38 -     25040 AG-G-TGTACTG-ATTACATCGAACTGAA-AATA-TG--TGAA-A-A
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          3077 38 +      3528 AG-G-TGTACTG-ATTACATCGAACTGAA-AATA-TG--TGAA-A-A
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  49444 38 +     51589 AG-G-TGTACTG-ATTACATCGAACTGAA-AATA-TG--TGAA-A-A
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       12620 38 +     14732 AG-G-TGTACTG-ATTACATCGAACTGAA-AATA-TG--TGAA-A-A
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       3097 38 -     28054 AG-G-TGTACTG-ATTACATCGAACTGAA-AATA-TG--TGAA-A-A
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44657892 38 -  44834318 AG-G-TGTACTG-ATTACATCGAACTGAA-AATA-TG--TGAA-A-A
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        2901 38 +      3372 AG-G-TGTACTG-ATTACATCGAACTGAA-AATA-TG--TGAA-A-A
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tupaia_chinensis.KB320831.1                             2791050 38 -   3938065 ta-c-tatattg-attgctttgaactaaa-gata-tt--taaa-a-c
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    3311 38 +     13056 ta-c-tatattg-attgctttgaatggaa-gaca-tc--tgaa-a-c
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Varecia_rubra.k141_432109                                  3658 38 -     20643 tg-g-tatactg-attactttgaatggaa-ggca-tc--tgat-a-a
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             23200 38 -     33872 cg-g-tatactg-attactttgaatggaa-ggca-tc--tgat-a-a
i Varecia_variegata.k141_775891                         C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       125436 38 -    134049 t-ag-catacta-atgacttctaattgag-ggca-tt--tgaa-a-a
i Xerus_inauris.XerIna_scaffold_7898                    I 10 I 7
s Zapus_hudsonius.ZapHud_scaffold_64392                     13665 32 -     20485 -g-g-tatgtga-atgacttctctctc------a-ct--gaag-a-a
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
e Eptesicus_fuscus.JH977687.1                             4702558 570 +   6522550 T
e Macroglossus_sobrinus.MacSob_scaffold_879                700405 588 +    802869 T
e Sorex_araneus.JH798170.1                               17749433 999 -  27805282 T
e Erinaceus_europaeus.JH835290.1                         11531295 619 +  16010500 T
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           1627  0 -      6963 C
e Suricata_suricatta.SurSur_flattened_line_20339            25749 587 +     62062 T
e Chrysochloris_asiatica.ChrAsi_scaffold_141308              8820 2035 -     12508 T
e Ziphius_cavirostris.ZipCav_flattened_line_127025           5743 596 -      8775 T
e Zalophus_californianus.ZalCal_flattened_line_4097        212466 605 -    227762 T
e Vulpes_lagopus.VulLag_flattened_line_2045                135938 606 -    281493 T
e Vicugna_pacos.KN269600.1                                1523470 590 -   2331223 T
e Ursus_maritimus.KK498671.1                              6513003 615 +  28682327 T
e Uropsilus_gracilis.UroGra_scaffold_139357                   696  0 +      2103 C
e Tursiops_truncatus.MRVK01000923.1                      69312246 595 -  96451834 T
e Trichechus_manatus.JH594618.1                          16081379 1856 +  31416278 T
e Tragulus_javanicus.TraJav_scaffold_14717                   4003 576 +     90398 T
e Tonatia_saurophila.TonSau_scaffold_3334                  134662 575 -    259118 T
e Tolypeutes_matacus.TolMat_scaffold_269431                  4396 2563 +      6782 T
e Tapirus_terrestris.TapTer_scaffold_14939                  56190 591 +     99546 T
e Tapirus_indicus.TapInd_scaffold_176                      805530 592 +   1148477 T
e Tamandua_tetradactyla.TamTet_scaffold_26877               13539 590 +     45698 T
e Tadarida_brasiliensis.TadBra_scaffold_145589               4581 564 -      6213 T
e Sus_scrofa.CM000824.4                                 189270675 604 + 218635234 T
e Spilogale_gracilis.SpiGra_flattened_line_905             233196 596 -    276980 T
e Solenodon_paradoxus.SolPar_flattened_line_1012            16792 573 +    739146 T
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   30171 591 -    114521 T
e Saiga_tatarica.SaiTat_scaffold_82192                       6411 583 +     12214 T
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                18082 592 +    109198 T
e Rhinolophus_sinicus.LVEH01000179.1                      1786602 584 +   2252614 T
e Rangifer_tarandus.RanTarSib_scaffold_24239                14609 588 +     68503 T
e Puma_concolor.QAVW01000427.1                          131532510 588 - 161321710 T
e Pteropus_vampyrus.KN525959.1                             602742 594 -   3946241 T
e Pteropus_alecto.KB031157.1                             13244792 595 -  17261082 T
e Pteronura_brasiliensis.PteBra_flattened_line_1343        244445 611 -    344369 T
e Pteronotus_parnellii.KE867983.1                            2652 575 -     27784 T
e Procavia_capensis.ProCapCap_scaffold_15315                76241 2096 +     78963 T
e Platanista_gangetica.PlaMin_flattened_line_72990           4214 597 +     21690 T
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            95634 565 +    112873 T
e Phocoena_phocoena.PhoPho_flattened_line_11948            120146 597 -    122454 T
e Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113863 604 -    135482 T
e Pantholops_hodgsonii.KE114631.1                         1064955 574 -   1292953 T
e Panthera_tigris.KE721879.1                              5025928 588 -   6340057 T
e Panthera_pardus.KV860323.1                              3636281 589 +  18214204 T
e Panthera_onca.PanOnc_flattened_line_1615                  32547 588 +    295523 T
e Ovis_canadensis.OviCan_scaffold_6251                      77308 574 +    140051 T
e Ovis_aries.CM001582.2                                 134076094 574 - 275406953 T
e Otocyon_megalotis.JAEUCK010005121.1                      305865 601 -    505867 T
e Orycteropus_afer.OryAfe_flattened_line_13509              43235 1921 -     66828 T
e Orcinus_orca.KB316965.1                                 7223529 597 -   7562323 T
e Okapia_johnstoni.LVCL01S0017931.1                         35827 729 +     78940 T
e Odocoileus_virginianus.KZ101650.1                       1078532 589 +   1425656 T
e Odobenus_rosmarus.KB229369.1                             677731 600 -   3126709 T
e Nyctereutes_procyonoides.CAJHUB010000786.1                28531 606 +   3668941 T
e Noctilio_leporinus.NocLep_scaffold_12062                  48091 568 +     94413 T
e Neophocaena_asiaeorientalis.KZ688543.1                  3949845 597 -   4490290 T
e Neomonachus_schauinslandi.NINY01007774.1                4483086 611 -  14209539 T
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3864 589 -      8794 T
e Myotis_myotis.MyoMyo_scaffold_6123                         8970 569 +     66751 T
e Myotis_lucifugus.GL429887.1                             3463776 570 -   3747815 T
e Myotis_davidii.KB114863.1                               5017879 569 +   6462685 T
e Myotis_brandtii.KE161952.1                               966190 571 +   8389877 T
e Mustela_putorius.JH417978.1                             4422351 610 -  28371801 T
e Murina_feae.MurFea_scaffold_2254                          17865 566 -    100666 T
e Mungos_mungo.MunMun_flattened_line_8729                  143083 585 -    168139 T
e Moschus_moschiferus.MosMos_scaffold_146101                 3404 589 -      4346 T
e Mormoops_blainvillei.MorMeg_scaffold_2952                159984 578 +    265003 T
e Monodon_monoceros.MonMon_M_scaffold_5598                 145232 596 +    154973 T
e Mirounga_angustirostris.MirAng_flattened_line_8852         9694 818 -    104932 T
e Miniopterus_schreibersii.MinSch_scaffold_24116            32901 573 +     45743 T
e Miniopterus_natalensis.LDJU01000022.1                   8208229 572 +  10048721 T
e Micronycteris_hirsuta.MicHir_scaffold_37978               21478 582 -     32043 T
e Microgale_talazaci.MicTal_scaffold_34660                  30484 1282 -     48017 T
e Mesoplodon_bidens.MesBid_scaffold_183284                   2166 255 +      2166 T
e Mellivora_capensis.MelCap_flattened_line_146202             779 605 -      1999 T
e Megaderma_lyra.MegLyr_scaffold_3562                       63204 732 -    234502 T
e Manis_pentadactyla.KN017078.1                             34979 596 +     58827 T
e Manis_javanica.JSZB01003966.1                            144904 595 +    252755 T
e Lycaon_pictus.CM007556.1                               11085538 606 +  39895028 T
e Loxodonta_africana.GL010040.1                          20590917 1859 -  62548349 T
e Lipotes_vexillifer.KE558548.1                            134797 598 +   3060487 T
e Leptonychotes_weddellii.KB714749.1                      3084186 615 -   3498232 T
e Lasiurus_borealis.LasBor_scaffold_5102                   112354 573 -    115756 T
e Kogia_breviceps.KogBre_flattened_line_35920               22464 592 +     37189 T
e Inia_geoffrensis.IniGeo_flattened_line_66725               7632 591 +     17520 T
e Hyaena_hyaena.HyaHya_flattened_line_20729                 14487 630 -     67322 T
e Hipposideros_galeritus.HipGal_scaffold_104691              6355 566 -      9143 T
e Hipposideros_armiger.JXIK01001085.1                      277196 565 -    477199 T
e Hippopotamus_amphibius.HipAmp_scaffold_1308              145879 587 +    277961 T
e Heterohyrax_brucei.HetBruBak_scaffold_25354               56377 2096 +     73687 T
e Hemitragus_hylocrius.HemHyl_scaffold_16669                26300 573 -     91191 T
e Helogale_parvula.HelPar_flattened_line_22962              15392 589 +     53719 T
e Giraffa_tippelskirchi.LVKQ01S012154.1                    180102 874 -    189561 T
e Felis_nigripes.FelNig_flattened_line_8080                 19352 584 +     52776 T
e Felis_catus_fca126.CM031420.1                         129278217 584 - 158578461 T
e Eubalaena_japonica.EubJap_flattened_line_7756             60304 620 +     89355 T
e Eschrichtius_robustus.EscRob_flattened_line_685          313850 596 +    330699 T
e Equus_przewalskii.ATBW01073585.1                          11740 861 +     92910 T
e Equus_caballus.CM000402.2                              13350250 861 +  41866177 T
e Equus_asinus.JREZ01000062.1                             5851747 860 -   7175178 T
e Enhydra_lutris.KZ291749.1                              85869969 610 +  99434291 T
e Elephantulus_edwardii.JH947210.1                        7805914 1445 +  15467074 T
e Elaphurus_davidianus.JRFZ01086400.1                     1490302 589 +   1727528 T
e Eidolon_helvum.KE772537.1                                 10991 592 +     24177 T
e Echinops_telfairi.JH980316.1                           22994071  0 -  44670279 C
e Diceros_bicornis.DicBicMic_scaffold_9545                   1977 1182 +    151128 T
e Dicerorhinus_sumatrensis.PEKH010003161.1                 321325 1172 +    993696 T
e Desmodus_rotundus.KZ672188.1                           18697602 573 -  18957592 T
e Delphinapterus_leucas.KZ290064.1                       80035644 592 -  96802777 T
e Dasypus_novemcinctus.JH568778.1                          182464 2581 -   6883506 T
e Cryptoprocta_ferox.CryFer_flattened_line_19014            50184 590 -     70449 T
e Crocidura_indochinensis.CroInd_scaffold_38409             18475 566 -     19186 T
e Craseonycteris_thonglongyai.CraTho_scaffold_22679         38414 982 -     40477 T
e Condylura_cristata.JH655880.1                          60611428 454 +  78930452 T
e Choloepus_hoffmanni.KN194586.1                           760580 596 +    964067 T
e Choloepus_didactylus.ChoDid_scaffold_36182                15269 596 -     21363 T
e Ceratotherium_simum_cottoni.CerCot_scaffold_160623         2430 1181 -      9338 T
e Catagonus_wagneri.CatWag_scaffold_1305                   157578 564 -    276539 T
e Carollia_perspicillata.CarPer_scaffold_4436               58293 574 +     67245 T
e Capra_hircus.CM004562.1                               135705256 574 - 157403528 T
e Capra_aegagrus.CM003214.1                              21324029 574 + 157394656 T
e Canis_lupus_orion.HG994411.1                           16453106 606 -  44759192 T
e Canis_lupus_familiaris.chr31                           11086082 606 +  39895921 T
e Canis_lupus_dingo.QKWQ01001993.1                       11263553 606 -  35597290 T
e Canis_lupus_VD.CanFam_VD_scaffold_16982                   11910 606 +     87036 T
e CanFam4.chr31                                          11516892 606 +  39901454 T
e Camelus_ferus.KB016973.1                                2971801 593 +   6889770 T
e Camelus_dromedarius.KN271192.1                           396068 594 -  15254737 T
e Camelus_bactrianus.KN276303.1                           3218363 593 -   8989139 T
e Bubalus_bubalis.KI419065.1                              1229773 588 -   1914593 T
e Bos_taurus.CM000177.6                                 136294018 589 - 158972876 T
e Bos_mutus.JH883513.1                                     570659 589 -    998990 T
e Bos_indicus.CM003021.1                                138138285 589 - 161108492 T
e Bison_bison.KN264915.1                                  6558046 589 +   6870073 T
e Beatragus_hunteri.BeaHun_scaffold_21644                   42015 569 -     72089 T
e Balaenoptera_bonaerensis.DF502048.1                        4197 598 -     13118 T
e Balaenoptera_acutorostrata.KI537095.1                  26378965 597 +  51448160 T
e Artibeus_jamaicensis.ArtJam_scaffold_41619                 7496 576 -     29036 T
e Antilocapra_americana.AntAmePen_scaffold_42841            29534 583 +     33004 T
e Anoura_caudifer.AnoCau_scaffold_422                      389095 570 -    631301 T
e Ammotragus_lervia.NIVO01013474.1                        3518953 602 +   4113121 T
e Ailurus_fulgens.LNAC01000003.1                          7092441 814 -  16596857 T
e Ailuropoda_melanoleuca.LNAT01000321.1                  10655516 614 +  23371972 T
e Acinonyx_jubatus.LLWD01000356.1                         2032169 587 +   3721120 T
e Prolemur_simus.MPIZ01000048.1                           6846762  1 +  12164890 I
e Piliocolobus_kirkii.k141_557609                           19957 700 +     19957 T
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65667885  0 +  89412551 C
e Nycticebus_coucang.k141_2051882                            2265  0 +      6470 C
e Nycticebus_bengalensis.LG16                            65565537  0 -  95554990 C
e Macaca_tonkeana.k141_2870633                               2864 158 -     27140 T
e Macaca_nigra.k141_282495                                   2859 158 -     46448 T
e Macaca_maura.k141_251854                                  43912 158 -     79256 T
e Lemur_catta.scaffold_1                                258405386  1 - 285822530 I
e Hapalemur_occidentalis.k141_797938                        43697  1 -     54384 I
e Hapalemur_meridionalis.k141_186231                        27103  1 -     42470 I
e Hapalemur_griseus.k141_1387522                             3826  1 +     56096 I
e Hapalemur_gilberti.k141_97962                             26366  1 +     26611 I
e Hapalemur_alaotrensis.k141_1198205                         3890  1 +      3980 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               10187 46 +    209709 ataa------caact-gtg-gAacatgct---------ttctct---gcac-tcccTT-TA----C--GTTCCT
s Acomys_cahirinus.AcoCah_scaffold_1625                    110924 50 -    189883 atca------g-cat-tctggcagaagct---------ttcttg---gaag-ccctat-tatctat--ctgcct
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   11368 47 -     22067 acag------caaat-tttggcagaagct---------ttctat---gaag-tcccct-ga----t--tcatct
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_3103707                  61201 46 +     61638 ACAA------CAAAT-GCA-GGACATGCT---------TTCTCT---GAAC-TCTCTT-TA----C--CTTCCT
i Allenopithecus_nigroviridis.k141_3103707              I 38 C 0
s Allochrocebus_lhoesti.k141_4825038                        53013 46 +     53391 ACAA------CAAAT-GCA-GGACATGCT---------TTCTCT---GAAC-TCTCTT-TA----C--CTTCCT
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         3738 46 +     72529 ACAA------CAAAT-GCA-GGACATGCT---------TTCTCT---GAAC-TCTCTT-TA----C--CTTCCT
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          3313 46 +      3797 ACAA------CAAAT-GCA-GGACATGCT---------TTCTCT---GAAC-TCTCTT-TA----C--CTTCCT
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             8459 46 -     18050 ACAA------CAAAT-GTG-GGACATGCT---------TTCTCT---GAAC-TCCCTT-TA----C--CTTCCT
i Alouatta_belzebul.k141_1818029                        C 0 I 5
s Alouatta_caraya.k141_5460                                  9572 46 -     11521 acag------caaat-gtg-ggacatgct---------ttctct---gaac-tccctt-ta----c--cttcct
i Alouatta_caraya.k141_5460                             C 0 I 5
s Alouatta_discolor.k141_811576                              9136 46 -     21359 ACAA------CAAAT-GTG-GGACATGCT---------TTCTCT---GAAC-TCCCTT-TA----C--CTTCCT
i Alouatta_discolor.k141_811576                         C 0 I 5
s Alouatta_juara.k141_1029606                                 396 46 -      1200 ACAA------CAAAT-GTG-GGACATGCT---------TTCTCT---GAAC-TCCCTT-TA----C--CTTCCT
i Alouatta_juara.k141_1029606                           I 38 I 472
s Alouatta_macconnelli.k141_1331706                          8427 46 -     10438 ACAA------CAAAT-GTG-GGACATGCT---------TTCTCT---GAAC-TCCCTT-TA----C--CTTCCT
i Alouatta_macconnelli.k141_1331706                     C 0 I 5
s Alouatta_nigerrima.k141_2718643                            5083 46 +      7047 ACAA------CAAAT-GTG-GGACATGCT---------TTCTCT---GAAC-TCCCTT-TA----C--CTTCCT
i Alouatta_nigerrima.k141_2718643                       C 0 I 5
s Alouatta_palliata.k141_1316127                             8368 46 +     10410 ACAA------CAAAT-GTG-GGACATGCT---------TTCTCT---GAAC-TCCCTT-TA----C--CTTCCT
i Alouatta_palliata.k141_1316127                        C 0 I 5
s Alouatta_puruensis.k141_1284840                            2172 46 -      4927 ACAA------CAAAT-GTG-GGACATGCT---------TTCTCT---GAAC-TCCCTT-TA----C--CTTCCT
i Alouatta_puruensis.k141_1284840                       C 0 I 5
s Alouatta_seniculus.k141_990213                             5102 46 +      6429 ACAA------CAAAT-GTG-GGACATGCT---------TTCTCT---GAAC-TCCCTT-TA----C--CTTCCT
i Alouatta_seniculus.k141_990213                        C 0 I 5
s Aotus_azarae.k141_3170768                                 60825 46 +     78111 ACAA------CAA-TCGTG-GGACATGCT---------TTCTCT---AAAC-TCCCTT-TA----T--CTTCCT
i Aotus_azarae.k141_3170768                             C 0 I 5
s Aotus_griseimembra.k141_3275623                            3766 46 +     22701 ACAA------CAA-TCGTG-GGACATGCT---------TTCTCT---GAAC-TCCCTT-TA----T--CTTCCT
i Aotus_griseimembra.k141_3275623                       C 0 I 5
s Aotus_nancymaae.KZ196176.1                              5747723 46 +   9889416 acaa------CAA-TCGTG-GGACATGCT---------TTCTCT---GAAC-TCCCTT-TA----T--CTTCCT
i Aotus_nancymaae.KZ196176.1                            C 0 I 5
s Aotus_trivirgatus.k141_1740727                             4308 46 -    104377 ACAA------CAA-TCGTG-GGACATGCT---------TTCTCT---GAAC-TCCCTT-TA----T--CTTCCT
i Aotus_trivirgatus.k141_1740727                        C 0 I 5
s Aotus_vociferans.k141_718647                               4314 46 +     23246 ACAA------CAA-TCGTG-GGACATGCT---------TTCTCT---GAAC-TCCCTT-TA----T--CTTCCT
i Aotus_vociferans.k141_718647                          C 0 I 5
s Aplodontia_rufa.AprRuf_scaffold_156013                     2318 44 +      5067 ACAG------CAAAC---ACAGAAAAGCC---------TTCTCT---CAAG-TTCTCA-TA----C--CT-GCT
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      16260 38 +     17483 -tag------caaat-gca-gaa---gct---------ttt-cc---aaac-tctc----a----t--ctgcct
i Arctocebus_calabarensis.k141_1161114                  I 14 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9537558 46 +  39197703 ACAA------TAAAT-GTG-GGACATGCT---------TTCTCT---GAAC-TCCCTT-TA----C--CTTCCT
i Ateles_geoffroyi_b.tarseq_2582                           C 0 I 5
s Ateles_belzebuth.k141_1348307                             58842 46 +     85812 ACAA------TAAAT-GTG-GGACATGCT---------TTCTCT---GAAC-TCCCTT-TA----C--CTTCCT
i Ateles_belzebuth.k141_1348307                         C 0 I 5
s Ateles_chamek.k141_1072810                                 9841 46 +     89302 ACAA------TAAAT-GTG-GGACATGCT---------TTCTCT---GAAC-TCCCTT-TA----C--CTTCCT
i Ateles_chamek.k141_1072810                            C 0 I 5
s Ateles_geoffroyi_a.k141_1300742                             14346 46 -     58268 ACAA------TAAAT-GTG-GGACATGCT---------TTCTCT---GAAC-TCCCTT-TA----C--CTTCCT
i Ateles_geoffroyi_a.k141_1300742                         C 0 I 5
s Ateles_marginatus.k141_899112                             62337 46 +    119057 ACAA------TAAAT-GTG-GGACATGCT---------TTCTCT---GAAC-TCCCTT-TA----C--CTTCCT
i Ateles_marginatus.k141_899112                         C 0 I 5
s Ateles_paniscus.k141_1631200                               4306 46 -     25888 ACAA------TAAAT-GTG-GGACATGCT---------TTCTCT---GAAC-TCCCTT-TA----C--CTTCCT
i Ateles_paniscus.k141_1631200                          C 0 I 5
s Avahi_laniger.k141_2840928                                 5078 46 -     16375 ataa------caaat-gca-ggagacact---------ttctct---gaac-tcccct-ta----t--ttgtct
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              1397 46 +      2719 atag------caaat-gca-ggagacact---------ttctct---gaac-tcccct-ta----t--ttgtct
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Cacajao_ayresi.k141_724503                               112196 46 -    171031 ACAA------CAAAT-GTG-GGACATGCT---------TTCTCT---GAAC-TCCCTT-TA----C--CTTCCT
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 11222 46 +    125063 ACAA------CAAAT-GTG-GGACATGCT---------TTCTCT---GAAC-TCCCTT-TA----C--CTTCCT
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                13270 46 -    216513 ACAA------CAAAT-GTG-GGACATGCT---------TTCTCT---GAAC-TCCCTT-TA----C--CTTCCT
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        5810 46 -    134917 ACAA------CAAAT-GTG-GGACATGCT---------TTCTCT---GAAC-TCCCTT-TA----C--CTTCCT
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Capromys_pilorides.CapPil_scaffold_979108                   424 28 -      1248 acag------caagt-cctgggagaagca---------ttctct------------------------------
i Capromys_pilorides.CapPil_scaffold_979108             C 0 C 0
s Carlito_syrichta.NW_007248099.1                          307429 45 +    345090 acag------caaat-gca-ggagatg-t---------ttttct---gaac-attctt-ta----t--ttgcct
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   28881 47 +     33760 acag------aaaat-gcaaagagtaacg---------ttctcc---aaag-tcccct-ta----t--ctgaca
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15785038 47 -  24422027 GCAA------CCAGT-TCTGAGAGAAGCA---------GTCTAT---GTAG-TCCGCT-GA----T--ACATGT
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15796972 47 -  24440124 GCAA------CCAGT-TCTGAGAGAAGCA---------GTCTAT---GTAG-TCCGCT-GA----T--GCATGT
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       175163 47 +    436027 gcaa------ccagt-tctgagagaagca---------gtctat---gtag-tccgct-ga----t--gcatgt
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18889054 45 -  29618158 ACAA------CAA-T-GTG-GGACATGCT---------TTCTTT---GAAC-TCCCTT-TA----C--CTTTCT
i Cebus_albifrons.Contig22                              C 0 I 9
s Cebus_olivaceus.k141_93739                                 6598 45 -     26817 ACAA------CAA-T-GTG-GGACATGCT---------TTCTTT---GAAC-TCCCTT-TA----C--CTTTCT
i Cebus_olivaceus.k141_93739                            C 0 I 9
s Cebus_unicolor.k141_239009                                10838 45 +     25043 ACAA------CAA-T-GTG-GGACATGCT---------TTCTTT---GAAC-TCCCTT-TA----C--CTTTCT
i Cebus_unicolor.k141_239009                            C 0 I 9
s Cephalopachus_bancanus.k141_702587                         6462 45 +     21754 acag------caaat-gca-ggagatg-t---------ttttct---gaac-attctt-ta----t--ttgcct
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6552997 46 +   6739814 acaa------CAAAT-GCA-GGACATGCT---------TTCTCT---GAAC-TCTCTT-TA----C--CTTCCT
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      54474 46 -     54931 ACAA------CAAAT-GCA-GGACATGCT---------TTCTCT---GAAC-TCTCTT-TA----C--CTTCCT
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_3387186                         19458 46 -     19697 ACAA------CAAAT-GCA-GGACATGCT---------TTCTCT---GAAC-TCTCTT-TA----C--CTTCCT
i Cercocebus_lunulatus.k141_3387186                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         56989 46 -    107033 ACAA------CAAAT-GCA-GGACATGCT---------TTCTCT---GAAC-TCTCTT-TA----C--CTTCCT
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        3429 46 -      3853 ACAA------CAAAT-GCA-GGACATGCT---------TTCTCT---GAAC-TCTCTT-TA----C--CTTCCT
i Cercopithecus_ascanius.k141_3371259                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          27360 46 +     30494 ACAA------CAAAT-GCA-GGACATGCT---------TTCTCT---GAAC-TCTCTT-TA----C--CTTCCT
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_1490386                           3389 46 -      4022 ACAA------CAAAT-GCA-GGACATGCT---------TTCTCT---GAAC-TCTCTT-TA----C--CTTCCT
i Cercopithecus_diana.k141_1490386                      C 0 C 0
s Cercopithecus_hamlyni.k141_381099                          3278 46 -      3505 ACAA------CAAAT-GCA-GGACATGCT---------TTCTCT---GAAC-TCTCTT-TA----C--CTTCCT
i Cercopithecus_hamlyni.k141_381099                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           22066 46 +     35983 ACAA------CAAAT-GCA-GGACATGCT---------TTCTCT---GAAC-TCTCTT-TA----C--CTTCCT
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11988603 46 +  12117833 ACAA------CAAAT-GCA-GGACATGCT---------TTCTCT---GAAC-TCTCTT-TA----C--CTTCCT
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46475356 46 +  46592721 ACAA------CAAAT-GCA-GGACATGCT---------TTCTCT---GAAC-TCTCTT-TA----C--CTTCCT
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1474992                      33185 46 +     33420 ACAA------CAAAT-GCA-GGACATGCT---------TTCTCT---GAAC-TCTCTT-TA----C--CTTCCT
i Cercopithecus_neglectus.k141_1474992                  C 0 C 0
s Cercopithecus_nictitans.k141_675209                        3219 46 -      3443 ACAA------CAAAT-GCA-GGACATGCT---------TTCTCT---GAAC-TCTCCT-TA----C--CTTCCT
i Cercopithecus_nictitans.k141_675209                   C 0 C 0
s Cercopithecus_petaurista.k141_2037881                      4217 46 -      4669 ACAA------CAAAT-GCA-GGACATGCT---------TTCTCT---GAAC-TCTCTT-TA----C--CTTCCT
i Cercopithecus_petaurista.k141_2037881                 C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        4005 46 -      4411 ACAA------CAAAT-GCA-GGACATGCT---------TTCTCT---GAAC-TCTCTT-TA----C--CTTCCT
i Cercopithecus_pogonias.k141_1977419                   C 0 C 0
s Cercopithecus_roloway.k141_3372345                         3540 46 -      4205 ACAA------CAAAT-GCA-GGACATGCT---------TTCTCT---GAAC-TCTCTT-TA----C--CTTCCT
i Cercopithecus_roloway.k141_3372345                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           57382 46 -     68416 atag------caaat-gca-ggagaagct---------ttctct---gaac-tcctct-ta----t--ttgtct
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            6424 46 +     13308 atag------caaat-gca-ggagaagct---------ttctct---gaac-tcctct-ta----c--ttgtct
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             3858 46 -     18223 ACAA------CAAAT-GTG-GGACATGCT---------TTCTCT---GAAC-TCCCTT-TA----C--CTTCCT
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             20881 46 +     25473 ACAA------CAAAT-GTG-GGACATGCT---------TTCTCT---GAAC-TCCCTT-TA----C--CTTCCT
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           39920 46 +     57117 ACAA------CAAAT-GTG-GGACATGCT---------TTCTCT---GAAC-TCCCTT-TA----C--CTTCCT
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          44595 46 +     54541 ACAA------CAAAT-GTG-GGACATGCT---------TTCTCT---GAAC-TCCCTT-TA----C--CTTCCT
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15960190 47 +  43084221 gcag------caaat-cctgggagaagaa---------ttctct---gaag-tccctt-ta----t--ccacct
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         69405 46 +    196370 ACAA------CAAAT-GTG-GGACATGCT---------TTCTCT---GAAC-TCCCTT-TA----C--CTTCCT
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          13585 46 +     40510 ACAA------CAAAT-GTG-GGACATGCT---------TTCTCT---GAAC-TCCCTT-TA----C--CTTCCT
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15136824 46 -  15256731 ACAA------CAAAT-GCA-GGACATGCT---------TTCTCT---GAAC-TCTCTT-TA----C--CTTCCT
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      31870 46 -     53260 ACAA------CAAAT-GCA-GGACATGCT---------TTCTCT---GAAC-TCTCTT-TA----C--CTTCCT
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101142319 46 + 101219884 acaa------CAAAT-GCA-GGACATGCT---------TTCTCT---GAAC-TCTCTT-TA----C--CTTCCT
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10887605 46 +  10971483 acaa------CAAAT-GCG-GGGCATGCT---------TTCTCT---GAAC-TCTCTT-TA----C--CTTCCT
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147662358 46 + 156195979 ACAA------CAAAT-GCG-GGGCATGCT---------TTCTCT---GAAC-TCTCTT-TA----C--CTTCCT
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            14348 44 +     23629 ACAA------CAAAT-GCC-GGGCATGCT---------TTCTCT---GGA---CTCTT-TA----C--CTTCCT
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 276799 47 -    399297 atga------gacat-tctggcagaagct---------ttcatg---gaag-tccctt-ta----t--ctgcct
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53027446 46 +  72327488 atga------ggcat-tggggctgatgct---------ttcttg---gaa--tcccct-ta----t--ctgcct
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  206602 52 -    956709 gcag------caaat-a----gtgaggtttttttttttttttct---gaaa-tcccct-ta----t--ctgtct
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 29144 46 -     67205 GCA----------AT-CCTGGTAGAATCA---------TTCTCT---CAGG-TCATTTATT----TTCTCATTT
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                16193 47 +     26546 gcag------caaat-cctgagagaagca---------ttctct---gaag-tcccct-ta----t--gcacct
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             57295 47 -    236241 gcag------caaat-cctgagagaagtg---------ttctct---gaag-tcccct-tg----t--gcacct
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16843239 46 +  31942871 aaag------caaat-gca-ggagaagat---------ttttct---gaac-tgtcct-ta----t--ctgcct
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   156082 47 +    228994 gcag------caaat-tctgggaaaacca---------ttctct---gaaa-tcccct-ta----t--ccacct
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3654056  7 +   4240102 -----------------------------------------------------------------T--ATATCT
i Dipodomys_ordii.KN672545.1                            I 261 I 4
s Dipodomys_stephensi.DipSte_scaffold_44365                 25661 45 +     28912 ACAA---TA-AAAAT-GTAGAGATAAAAG-------------CT---AAAG-TTCCCT-TG----T--ATATCT
i Dipodomys_stephensi.DipSte_scaffold_44365             I 303 I 4
s Dolichotis_patagonum.DolPat_scaffold_14102                34546 47 -     73477 gcag------ccaat-cctgagagaagca---------ttctgt---gaag-tcccct-ta----t--gtacgg
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        238098 47 -    369425 atga------gttat-tcactcagaagct---------ttcttg---gaag-tcccct-ta----t--ctgtct
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           5114 47 -      7838 atga------ggtat-tcactcagaagct---------ttcatg---gaag-tcccct-ta----t--ctgtct
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Erythrocebus_patas.Contig8                             48769002 46 -  48907691 ACAA------CAAAT-GCA-GGACATGCT---------TTCTCT---GAAC-TCTCTT-TA----C--CTTCCT
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eulemur_albifrons.k141_715837                              3424 46 +     13586 gtag------caaat-gca-ggagaagct---------ttctct---aaac-tcccct-ta----t--ttgcct
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               3359 46 -      6809 atag------caaat-gca-ggagaagct---------ttctct---aaac-tcccct-ta----t--ttgcct
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             9834 46 +     36558 atag------caaat-gca-ggagaagct---------ttctct---gaac-tcccct-ta----t--ttgcct
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             6150 46 +     60246 atag------caaat-gca-ggagaagct---------ttctct---aaac-tcccct-ta----t--ttgcct
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 9632 46 +    109717 atag------caaat-gca-ggagaagct---------ttctct---aaac-tcccct-ta----t--ttgcct
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               14012 46 +     16540 atag------caaat-gca-ggagaagct---------ttctct---aaac-tcccct-ta----t--ttgcct
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                14287 46 +     27497 atag------caaat-gca-ggagaagct---------ttctct---aaac-tcccct-ta----t--ttgcct
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           16744 46 +     26808 atag------caaat-gca-ggagaagct---------ttctct---aaac-tctcct-ta----t--ttgcct
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                31477 46 +     46535 gtag------caaat-gca-ggagaagct---------ttctct---gaac-tcccct-ta----t--ttgcct
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              14200 46 -     29447 gtag------caaat-gca-ggagaagct---------ttctct---gaac-tcccct-ta----t--ttgcct
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Fukomys_damarensis.KN123630.1                          13891142 47 -  19261668 gcag------taaat-tttgggagaagct---------ttcttg---gaag-tcccct-ta----t--ctgcct
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     209336 43 -    847004 atcg------caaat-gcc-gaa---gct---------ttttct---gaac-tctcct-ta----t--ctgcct
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           11715 43 -     43889 atcg------caaat-gcc-gaa---gct---------ttttct---gaac-tctcct-ta----t--ctgcct
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           8783 43 +     27357 atca------caaat-gca-gaa---ggt---------ttttct---gaac-tctcct-ta----t--ctgcct
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               154695 47 +    324696 acag------caaat-gcaaggagaagct---------ttctct---gaac-tctcct-ta----t--ctgact
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           11091 47 -     18683 aaag------caaag-gtgaagagaagct---------tcctct---aagg-tcccct-ta----c--cttcct
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               3586 46 -     14630 acaa------caaat-gcg-ggacatgcc---------ttctct---gcac-tccctt-ta----c--cttcct
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119650685 46 - 195582420 acaa------caaat-gcg-ggacatgcc---------ttctct---gcac-tccctt-ta----c--cttcct
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   75832 47 +    118900 gtag------caaat-gtgaagagaagct---------tcctct---caag-tcccct-ta----c--ctgcct
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                         3891 10 +      3980 ---------------------------------------------------------t-ga----c--cagcct
i Hapalemur_alaotrensis.k141_1198205                    I 1 T 591
s Hapalemur_gilberti.k141_97962                             26367 10 +     26611 ---------------------------------------------------------t-ga----c--cagcct
i Hapalemur_gilberti.k141_97962                         I 1 T 592
s Hapalemur_griseus.k141_1387522                             3827 10 +     56096 ---------------------------------------------------------t-ga----c--cagcct
i Hapalemur_griseus.k141_1387522                        I 1 I 237
s Hapalemur_meridionalis.k141_186231                        27104 10 -     42470 ---------------------------------------------------------t-ga----c--cagcct
i Hapalemur_meridionalis.k141_186231                    I 1 I 236
s Hapalemur_occidentalis.k141_797938                        43698 10 -     54384 ---------------------------------------------------------t-ga----c--cagcct
i Hapalemur_occidentalis.k141_797938                    I 1 I 240
s Heterocephalus_glaber.JH602058.1                        2549532 47 +  31725842 gcat------caaat-tgtgggagaaact---------ttcttg---ggag-tcccct-ta----t--ccacct
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Hoolock_leuconedys.ctg2405                                   13618 46 -     15084 acaa------caaat-gcg-ggacatgct---------ttctct---gcac-tctctt-ta----c--cttcct
i Hoolock_leuconedys.ctg2405                               C 0 I 37
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           17457 26 -    119109 GCAG------CCAAT-CCTGAGAGAAGCA---------TTGT--------------------------------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 I 6
s Hylobates_abbotti.k141_493872                              3579  4 +      5897 ATAA----------------------------------------------------------------------
i Hylobates_abbotti.k141_493872                         I 7 T 857
s Hylobates_agilis.k141_624065                                443  4 +      2112 ATAA----------------------------------------------------------------------
i Hylobates_agilis.k141_624065                          I 7 I 264
s Hylobates_klossii.k141_466549                             10019  4 +     11537 ATAA----------------------------------------------------------------------
i Hylobates_klossii.k141_466549                         I 7 T 853
s Hylobates_pileatus_b.ContigUN                                 14623124  4 -  25970782 ATAA----------------------------------------------------------------------
i Hylobates_pileatus_b.ContigUN                                I 7 T 857
s Hylobates_muelleri.k141_1389047                             380  4 -      2977 ATAA----------------------------------------------------------------------
i Hylobates_muelleri.k141_1389047                       I 7 I 264
s Hylobates_pileatus_a.tarseq_592                             31775  4 -     60944 ACAA----------------------------------------------------------------------
i Hylobates_pileatus_a.tarseq_592                         T 729 T 1016
s Hystrix_cristata.HysCri_scaffold_50788                     4585 46 +     22540 gaaa------caaac--ccgcaagaagca---------tcctct---gaag-tccact-ca----c--ctgcct
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7124465 33 +  13083262 --------------------agaaaagct---------tttttg---gaag-tcctct-ta----c--ct-gct
i Ictidomys_tridecemlineatus.JH393315.1                 I 7 C 0
s Indri_indri.k141_1884019                                   1671 46 -      2196 atag------caaat-tca-ggagcagct---------ttctct---gaac-tcccct-ta----t--ttgtct
i Indri_indri.k141_1884019                              C 0 C 0
s Jaculus_jaculus.JH725517.1                              8564115 47 +  11848649 acag------caaat-tttggcagaagct---------ttctat---gaac-tcccct-ga----t--tcatct
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Lagothrix_lagothricha.k141_12968                          48427 46 -    147782 ACAA------CAAAT-GTG-GGACATGCT---------TTCTCT---GAAC-TCCCTT-TA----C--TTTCCT
i Lagothrix_lagothricha.k141_12968                      C 0 I 5
s Lemur_catta.scaffold_1                                258405387 10 - 285822530 ---------------------------------------------------------t-ga----c--cagcct
i Lemur_catta.scaffold_1                                I 1 I 233
s Lepilemur_ankaranensis.k141_884009                        22354 46 +     39228 acag------caaat-gca-ggagaagct---------ttatct---gaac-tcccct-ta----t--ttgtct
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            51729 46 +     63517 acag------caaat-gca-ggagaagct---------ttatct---gaac-tcccct-ta----t--ttgtct
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        76973 46 +    116806 acag------caaat-gca-ggaggagct---------ttatct---gaac-tcccct-ta----t--ttgtct
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     29993 46 -     33031 acag------caaat-gca-ggagaagct---------ttatct---gaac-tcccct-ta----t--ttgtct
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    11443 34 +     22452 atag------caaat-gtggaaagaagct---------ttctct---gaat-ct--------------------
i Lepus_americanus.LepAme_scaffold_62849                C 0 I 2
s Lophocebus_aterrimus.ctg55                             19246085 46 +  19376315 ACAA------CAAAT-GCA-GGACATGCT---------TTCTCT---GAAC-TCTCTT-TA----C--CTTCCT
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            9079 43 +     84689 atag------caaac-gca-gaa---gtt---------ttttct---gaac-tctcct-ta----t--ctgcct
i Loris_lydekkerianus.k141_550999                       I 14 C 0
s Loris_tardigradus.ctg97                                 3776830 43 +   6799190 atag------caaac-gca-gaa---gtt---------ttttct---gaac-tctcct-ta----t--ctgcct
i Loris_tardigradus.ctg97                               I 14 C 0
s Macaca_arctoides.k141_2201161                             17761 44 +     74745 ACAA------CAAAT-GTG-GGACAT--T---------TTCTCT---GAGC-TCTCTT-TA----C--CTTCCT
i Macaca_arctoides.k141_2201161                         C 0 I 1
s Macaca_assamensis.Contig65                             12704271 44 +  12821369 ACAA------CAAAT-GTG-GGACAT--T---------TTCTCT---GAGC-TCTCTT-TA----C--CTTCCT
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_1168412                               6367 44 +      6569 ACAA------CAAAT-GTG-GGACAT--T---------TTCTCT---GAGC-TCTCTT-TA----C--CTTCCT
i Macaca_cyclopis.k119_1168412                          C 0 C 0
s Macaca_fascicularis.k141_155037                           44669 44 +     63263 ACAA------CAAAT-GCG-GGACAT--T---------TTCTCT---GAGC-TCTCTT-TA----C--CTTCCT
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_925451                                  677 44 +     10231 ACAA------CAAAT-GTG-GGACAT--T---------TTCTCT---GAGC-TCTCTT-TA----C--CTTCCT
i Macaca_fuscata.k119_925451                            C 0 C 0
s Macaca_leonina.k141_3421209                                2818 44 +      3017 ACAA------GAAAT-GTG-GGACAT--T---------TTCTCT---GAGC-TCTCTT-TA----C--CTTCCT
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_mulatta.NC_041755.1                            196033348 44 + 196197964 acaa------CAAAT-GTG-GGACAT--T---------TTCTCT---GAGC-TCTCTT-TA----C--CTTCCT
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11443454 44 +  11645122 acaa------caaat-gtg-GGACAT--T---------TTCTCT---GAGC-TCTCTT-TA----C--CTTCCT
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_radiata.k141_1580474                                3210 44 -      3617 ACGA------CAAAT-GCG-GGGCAT--T---------TTCTCT---GAGC-TCTCTT-TA----C--CTTCCT
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 13540 44 -     55006 ACAA------CAAAT-GTG-GGACAT--T---------TTCTCT---GAGC-TCTCTT-TA----C--CTTCCT
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43838577 44 +  43892939 ACAA------CAAAT-GTG-GGACAT--T---------TTCTCT---GAGC-TCTCTT-TA----C--CTTCCT
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                5799 44 -      5978 ACAA------CAAAT-GTG-GGACAT--T---------TTCTCT---GAGC-TCTCTT-TA----C--CTTCCT
i Macaca_thibetana.k99_116940                           C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43435247 46 -  43563597 ACAA------CAAAT-GCA-GGACATGCT---------TTCTCT---GAAC-TCTCTT-TA----C--CTTCCT
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4448073 46 -   4543643 ACAA------CAAAT-GCA-GGACATGCT---------TTCTCT---GAAC-TCTCTT-TA----C--CTTCCT
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36872300 33 +  64221397 --------------------agaaaagct---------tttttg---gaat-tcctct-ta----c--ct-gct
i Marmota_marmota.CZRN01000005.1                        I 7 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               10381 47 +     15977 atga------gacat-tctggcagaagct---------ttctag---gaag-ccctct-ta----t--ctgctg
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1045185 46 -  26018355 atga------gccat-tcgggcagacact---------ttcttg---gat--ccccct-ta----t--ctgcct
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Microcebus_murinus.CM007691.1                          16508599 46 +  47401472 atag------CAAAT-GCA-ggagaagct---------ttctcc---aaac-tcccct-ta----t--ttgtct
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22818301 47 -  98408828 acga------ggcat-tcacacagaagct---------ttcttg---gcag-taccct-ta----t--ctgtct
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        33902 46 +     34273 ACAA------CAAAT-GCA-GGACATGCT---------TTCTCT---GAAC-TCTCTT-TA----C--CTTCCT
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirza_zaza.k141_226143                                     3997 46 +      8497 atag------caaat-gca-ggagaagct---------ttCTCC---AAAC-TCCCCT-TA----T--TTGTCT
i Mirza_zaza.k141_226143                                C 0 C 0
s Mus_caroli.LT608236.1                                  70764793 47 +  92629107 atga------gacat-cccagtagaagct---------ttcttg---gaag-tcttct-gg----t--ctgcct
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75487829 47 +  98207768 ATGA------GACAT-CCCAGTAGAAGCT---------TTCTTG---GAAG-TCTCCT-GG----T--CTGCCT
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67554017 47 +  89017189 CTGA------GACAT-CCCCGCAGAAGCT---------TTCTTG---CCAA-CCTCCT-AG----T--CGGCCT
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74329009 47 +  97876770 atga------gacat-cCCAGTAGAAGCT---------TTCTTG---GAAG-TCTCCT-GG----T--CTGCCT
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              9570 47 +     98495 aaaa------caaat-gtgaagagaaact---------tccgtt---gagg-acttct-ta----c--ttacct
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     88490 27 -    117718 gcag------caagt-c-tgggagaagca---------ctctCT------------------------------
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Nannospalax_galili.KL201303.1                            116618 46 +    362372 atgg------caaAT-TTC-AGAAAAGCT---------TTTTTG---GAAG-TCCTTT-TA----C--CAACCT
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               6277 46 +     48152 ACAA------CAAAT-GCG-GGACATGCT---------TTCTCT---GAAC-TCTCTT-TA----C--CTTCCT
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Nomascus_annamensis.k141_302224                             247 46 +      1516 acaa------caaat-gcg-ggacatgct---------ttctct---gcac-tccctt-ta----c--cttcct
i Nomascus_annamensis.k141_302224                       C 0 I 37
s Nomascus_concolor.k141_49591                               1368 46 +      2014 acaa------caaat-gcg-ggacatgct---------ttctct---gcac-tccctt-ta----c--cttcct
i Nomascus_concolor.k141_49591                          C 0 C 0
s Nomascus_gabriellae.k141_642452                             293 46 +      2851 acaa------caaat-gcg-ggacatgct---------ttctct---gcac-tccctt-ta----c--cttcct
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             23208 46 -  18771707 acaa------caaat-gcg-ggacatgct---------ttctct---gcac-tccctt-ta----c--cttcct
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                   921 46 +      4512 acaa------caaat-gcg-ggacatgct---------ttctct---gcac-tccatt-ta----c--cttcct
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nycticebus_bengalensis.LG16                            65565537 38 -  95554990 -----------AAAA-GCA-gaa---gct---------ttttct---gaac-tctcct-ta----t--ctgcct
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            2265 38 +      6470 -----------AAAA-GCA-gaa---gct---------ttttct---gaac-tctcct-ta----t--ctgcct
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65667885 38 +  89412551 -----------AAAA-GCA-gaa---gct---------ttttct---gaac-tctcct-ta----t--ctgcct
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4994423 47 -  23139505 gcag------caaat-gtgaagagaagct---------ttctct---gact-ttccct-ca----a--atacct
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3683987 49 +  10294119 gcag------caaat-cctgatacaacca---------ttctct---caga-tctttt-tt----ttcccactt
i Octodon_degus.JH651621.1                              C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  123569 47 +    145789 atga------ggcat-tcacgcagaagct---------ttcttg---gaag-ttccct-ta----t--ctgtct
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  35321 47 +     62360 atgc------aacat-ccaggcagaagct---------ttcttg---gaag-tcccct-ta----t--ctgcat
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141874077 34 + 163896628 acag------caaat-gtggaacgaagct---------ttctct---gaAT-CC--------------------
i Oryctolagus_cuniculus.CM000803.1                      C 0 I 2
s Otolemur_crassicaudatus.k141_321880                       37426 43 +     38679 atcg------caaat-tca-gaa---gct---------ttttct---gaac-tctccg-ta----t--ctgcct
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18006858 43 -  38779656 ATGG------CAAAT-ACA-GAA---GCT---------TTTTCT---GAAC-TCTCCT-TA----T--CTGCCT
i Otolemur_garnettii.GL873528.1                         I 5 C 0
s Pan_paniscus.CM003386.1                               127572930 46 - 205426864 acaa------caaat-gcG-GGACATGCT---------TTCTCT---GCAC-TCCCTT-TA----C--CTTCCT
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120150083 46 - 196562556 acaa------caaat-gcG-GGACATGCT---------TTCTCT---GCAC-TCCCTT-TA----C--CTTCCT
i Pan_troglodytes.CM009241.2                            C 0 T 724
s Papio_anubis.CM001492.2                               188154029 46 - 188283584 acaa------CAAAT-GCA-GGACACGCT---------TTCTCT---GAAC-TCTCTT-TA----C--CTTCCT
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_386926                            50241 46 +     76494 ACAA------CAAAT-GCA-GGACATGCT---------TTCTCT---GAAC-TCTCTT-TA----C--CTTCCT
i Papio_cynocephalus.k141_386926                        C 0 C 0
s Papio_hamadryas.Contig15                               47511426 46 +  47705337 ACAA------CAAAT-GCA-GGACATGCT---------TTCTCT---GAAC-TCTCTT-TA----C--CTTCCT
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 65403 46 -    104429 ACAA------CAAAT-GCA-GGACATGCT---------TTCTCT---GAAC-TCTCTT-TA----C--CTTCCT
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_3561084                                  15194 46 -     29451 ACAA------CAAAT-GCA-GGACATGCT---------TTCTCT---GAAC-TCTCTT-CA----C--CTTCCT
i Papio_papio.k141_3561084                              C 0 C 0
s Papio_ursinus.k141_3762866                                35597 46 +     35859 ACAA------CAAAT-GCA-GGACATGCT---------TTCTCT---GAAC-TCTCTT-TA----C--CTTCCT
i Papio_ursinus.k141_3762866                            C 0 C 0
s Perodicticus_ibeanus.k141_117958                           3469 42 -     23713 atag------caaat-gca-gaa---gct---------ttt-cc---aaac-tctcct-ta----t--ctgcct
i Perodicticus_ibeanus.k141_117958                      I 14 C 0
s Perodicticus_potto.k141_713187                            22767 42 -     27972 atag------caaat-gca-gaa---gct---------ttt-cc---aaac-tctcct-ta----t--ctgcct
i Perodicticus_potto.k141_713187                        I 14 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      41635 56 -     45160 ACAAAAATAAAAAAT-GTAGAGATAAAAG--TTTTTTT----CT---AAAA-TTACCT-TG----T--ATATCT
i Perognathus_longimembris.PerPac_flattened_line_22291  I 273 C 0
s Peromyscus_maniculatus.KI615518.1                       4948513 47 -   8017169 atgc------gacat-ccaggcagaagct---------ttcttg---gaag-taccct-ta----t--ctgcat
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    10685 46 -     36578 g-ag------aaaat-cctgggagaagtt---------gtctct---gcag-ccccct-ta----t--ctacct
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Piliocolobus_badius.k141_1610110                          39042 46 +     39618 ACAA------CAAAT-GCG-GGACATGCT---------TTCTCT---GAAC-TCTCTT-TA----C--CTTCCT
i Piliocolobus_badius.k141_1610110                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                        418 46 -     17985 ACAA------CAAAT-GCG-GGACATGCT---------TTCTCT---GAAC-TCTCTT-TA----C--CTTCCT
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26738263 46 +  26888534 acaa------CAAAT-GCG-GGACATGCT---------TTCTCT---GAAC-TCTCTT-TA----C--CTTCCT
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pithecia_albicans.k141_991845                             41910 46 -     61926 ACAA------CAAAT-GTG-GGACATGCT---------TTCTCT---GAAC-TCCCTT-TA----C--CTTCCT
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        23339 46 +     78826 ACAA------CAAAT-GTG-GGACATGCT---------TTCTCT---GAAC-TCCCTT-TA----C--CTTCCT
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              7290 46 -     15800 ACAA------CAAAT-GTG-GGACATGCT---------TTCTCT---GAAC-TCCCTT-TA----C--CTTCCT
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        10488 46 -     16101 ACAA------CAAAT-GTG-GGACATGCT---------TTCTCT---GAAC-TCCCTT-TA----C--CTTCCT
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          3797 46 +      9673 ACAA------CAAAT-GTG-GGACATGCT---------TTCTCT---GAAC-TCCCTT-TA----C--CTTCCT
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13472791 46 -  19735023 ACAA------CAAAT-GTG-GGACATGCT---------TTCTCT---GAAC-TCCCTT-TA----C--CTTCCT
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           11699 46 -     31692 ACAA------CAAAT-GTG-GGACATGCT---------TTCTCT---GAAC-TCCCTT-TA----C--CTTCCT
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       21135 46 +     44506 ACAA------CAAAT-GTG-GGACATGCT---------TTCTCT---GAAC-TCCCTT-TA----C--CTTCCT
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        21345 46 +     67491 ACAA------CAAAT-GTG-GGACATGCT---------TTCTCT---GAAC-TCCCTT-TA----C--CTTCCT
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      11586 46 -     98129 ACAA------CAAAT-GTG-GGACATGCT---------TTCTCT---GAAC-TCCCTT-TA----C--CTTCCT
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     21191 46 +    147771 ACAA------CAAAT-GTG-GGACATGCT---------TTCTCT---GAAC-TCCCTT-TA----C--CTTCCT
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        21440 46 -     23762 ACAA------CAAAT-GTG-GGACATGCT---------TTCTCT---GAAC-TCCCTT-TA----C--CTTCCT
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          1907 46 -     55515 ACAA------CAAAT-GTG-GGACATGCT---------TTCTCT---GAAC-TCCCTT-TA----C--CTTCCT
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         21260 46 +    152463 ACAA------CAAAT-GTG-GGACATGCT---------TTCTCT---GAAC-TCCCTT-TA----C--CTTCCT
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      8020 46 +      8943 ACAA------CAAAT-GTG-GGACATGCT---------TTCTCT---GAAC-TCCCTT-TA----C--CTTCCT
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                         10980 46 +    134592 ACAA------CAAAT-GTG-GGACATGCT---------TTCTCT---GAAC-TCCCTT-TA----C--CTTCCT
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          21570 46 -     75465 ACAA------CAAAT-GTG-GGACATGCT---------TTCTCT---GAAC-TCCCTT-TA----C--CTTCCT
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              185474 46 -    373494 acaa------caaat-gcG-GGACATGCT---------TTCTCT---GCAC-TCCCTT-TA----C--CTTCCT
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19805382 46 +  19899266 acaa------caaat-gcg-ggacatgct---------ttctct---gcac-tccctt-ta----c--cttcct
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               3521 46 -     15069 ACAA------CAAAT-GCG-AGACATGCT---------TTCTCT---GAAC-TCTCTT-TA----C--CTTCCT
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              3655 46 +     14865 ACAA------CAAAT-GCG-AGACATGCT---------TTCTCT---GAAC-TCTCTT-TA----C--CTTCCT
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6846763 10 +  12164890 ---------------------------------------------------------t-ga----c--cagcct
i Prolemur_simus.MPIZ01000048.1                         I 1 I 238
s Propithecus_coquerelli.NW_012147997.1                    666174 46 -   2312742 atag------cAAAT-GCA-gaagacgct---------ttctct---gaac-tcccct-ta----t--ttgtct
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         2004 46 +     11805 atag------caaat-gca-ggagatgct---------ttctct---gaac-tcccct-ta----t--ttgtct
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           41339 46 +     52369 atag------caaat-gca-ggagacgct---------ttctct---gaac-tcccct-ta----t--ttgtct
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         33728 46 -     44753 atag------caaat-gca-ggagacgct---------ttctct---gaac-tcccct-ta----t--ttgtct
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            15649 46 +     27322 atag------caaat-gca-ggagacgct---------ttctct---gaac-tcccct-ta----t--ttgtct
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       15288 46 -     53241 atag------caaat-gca-gaagacgct---------ttctct---gaac-tcccct-ta----t--ttgtct
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         37559 46 -     48185 atag------caaat-gca-ggagacgct---------ttctct---gaac-tcccct-ta----t--ttgtct
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           31932 46 +     77221 atga------gacat-tctggcagaagct---------ttctag---gaag-ccctct-t-----t--ctgccc
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pygathrix_cinerea.k141_374971                             27646 44 +     56732 ACAA------CAAAT-GCG-GGACATGCT---------TTCTCG---GAAC-TCTCT---A----C--CTTCCT
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6804137 44 +   6970761 ACAA------CAAAT-GCG-GGACATGCT---------TTCTCG---GAAC-TCTCT---A----C--CTTCCT
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             3531 44 +     18040 ACAA------CAAAT-GCG-GGACATGCT---------TTCTCG---GAAC-TCTCT---A----C--CTTCCT
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rattus_norvegicus.chr11                                13913880 47 +  90463843 atga------gacat-tccaacaggagtg---------ttcttg---aaag-tcccct-tg----t--ctgccC
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinopithecus_bieti.k119_102124                           14083 46 -     14454 ACAA------CAAAT-GCG-GGACATGCT---------TTCTCT---GAAC-TCTCTT-TA----C--CTTCCT
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206375409 46 - 206558726 acaa------CAAAT-GCG-GGACATGCT---------TTCTCT---GAAC-TCTCTT-TA----C--CTTCCT
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44853057 46 -  45163003 ACAA------CAAAT-GCG-GGACATGCT---------TTCTCT---GAAC-TCTCTT-TA----C--CTTCCT
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15671009 45 -  43202129 acaa------CAA-T-GTG-GGACATGCT---------TTCTCT---GAAC-TCCCTT-TA----C--CTTTCT
i Saimiri_boliviensis.NW_024100938.1                    C 0 I 9
s Saimiri_cassiquiarensis.k141_808270                        2875 45 +     34089 ACAA------CAA-T-GTG-GGACATGCT---------TTCTCT---GAAC-TCCCTT-TA----C--CTTTCT
i Saimiri_cassiquiarensis.k141_808270                   C 0 I 9
s Saimiri_macrodon.k141_2087127                              2816 45 -     60842 ACAA------CAA-T-GTG-GGACATGCT---------TTCTCT---GAAC-TCCCTT-TA----C--CTTTCT
i Saimiri_macrodon.k141_2087127                         C 0 I 9
s Saimiri_oerstedii.k141_841116                              2911 45 +     67014 ACAA------CAA-T-GTG-GGACATGCT---------TTCTCT---GAAC-TCCCTT-TA----C--CTTTCT
i Saimiri_oerstedii.k141_841116                         C 0 I 9
s Saimiri_sciureus.k141_1947592                              2889 45 +     60816 ACAA------CGA-T-GTG-GGACATGCT---------TTCTCT---GAAC-TCCCTT-TA----C--CTTTCT
i Saimiri_sciureus.k141_1947592                         C 0 I 9
s Saimiri_ustus.k141_1282476                                 2826 45 -     76454 ACAA------CAA-T-GTG-GGACATGCT---------TTCTCT---GAAC-TCCCTT-TA----C--CTTTCT
i Saimiri_ustus.k141_1282476                            C 0 I 9
s Sapajus_apella.ctg10                                   17339581 45 -  30362882 ACAA------CAA-T-GTG-GGACATGCT---------TTCTTT---GAAC-TCCCTT-TA----C--CTTTCT
i Sapajus_apella.ctg10                                  C 0 I 9
s Sapajus_macrocephalus.k141_966464                         18956 45 -     62485 ACAA------CAA-T-GTG-GGACATGCT---------TTCTTT---GAAC-TCCCTT-TA----C--CTTTCT
i Sapajus_macrocephalus.k141_966464                     C 0 I 9
s Semnopithecus_entellus.k141_1527475                       26073 46 +     26421 ACAA------CAAAT-GCG-GGACATGCT---------TTCTCT---GAAC-TCTCTT-TA----C--CTTCCT
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       6533 46 +     20762 ACAA------CAAAT-GCG-GGACATGCT---------TTCGCT---GAAC-TCTCTT-TA----C--CTTCCT
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         40268 46 +     40653 ACAA------CAAAT-GCG-GGACATGCT---------TTCTCT---GAAC-TCTCTT-TA----C--CTTCCT
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                           10825 46 -     12194 ACAA------CAAAT-GCG-GGACATGCT---------TTCGCT---GAAC-TCTCTT-TA----C--CTTCCT
i Semnopithecus_priam.k141_198153                       C 0 C 0
s Semnopithecus_schistaceus.k141_653647                     24247 46 -     27512 ACAA------CAAAT-GCG-GGACATGCT---------TTCTCT---GAAC-TCTCTT-TA----C--CTTCCT
i Semnopithecus_schistaceus.k141_653647                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         33262 46 -     33692 ACAA------CAAAT-GCG-GGACATGCT---------TTCTCT---GAAC-TCTCTT-TA----C--CTTCCT
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   98106 47 -    120886 atga------gatat-tca-gcagaagct---------ttcttg---gaag-tccccttta----c--ctgcct
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2238382 33 +   2842873 --------------------agaaaagcT---------TTTTTG---GAAG-TCCTCT-TG----C--CT-GCT
i Spermophilus_dauricus.KZ294190.1                      I 7 C 0
s Symphalangus_syndactylus.tarseq_24                        13200 46 -  13920577 acaa------caaat-gcg-ggacatgct---------ttctct---gcac-tctctt-ta----c--cttcct
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tarsius_lariang.k141_609102                               24912 46 +     42269 acag------caaat-gca-ggagatgtt---------ttttct---gaac-tttctt-ta----t--ttgcct
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               58228 46 +     65473 acag------caaat-gca-ggagatgtt---------ttttct---gaac-tttctt-ta----t--ttgcct
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194005565 46 - 194193292 acaa------CAAAT-GCA-GGACATGCT---------TTCTCT---GAAC-TCTCTT-TA----C--CTTCCT
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             37732 47 -     47444 gcag------taaat-cgtgggagaagtt---------ttctct---gaag-tcccct-ta----t--ctgcct
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         I 4 C 0
s Trachypithecus_auratus.k141_738098                        24643 46 +     38948 ACAA------CAAAT-GCG-GGACATGCT---------TTCTCT---GAAC-TCTCTT-TA----C--CTTCCT
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   18370 46 -     32910 ACAA------CAAAT-GCG-GGACATGCT---------TTCTCT---GAAC-TCTCTT-TA----C--CTTCCT
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       24268 46 +     24652 ACAA------CAAAT-GCG-GGACATGCT---------TTCTCT---GAAC-TCTCTT-TA----C--CTTCCT
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      3146 46 -      3559 ACAA------CAAAT-GCG-GGACATGCT---------TTCTCT---GAAC-TCTCTT-TA----C--CTTCCT
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           41090 46 -     54611 ACAA------CAAAT-GCG-GGACATGCT---------TTCTCT---GAAC-TCTCTT-TA----C--CTTCCT
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       17091 46 +     17312 ACAA------CAAAT-GCG-GGACATGCT---------TTCTCT---GAAC-TCTCTT-TA----C--CTTCCT
i Trachypithecus_germaini.k141_809503                   C 0 C 0
s Trachypithecus_hatinhensis.k141_357672                    24454 46 -     25040 ACAA------CAAAT-GCG-GGACATGCT---------TTCTCT---GAAC-TCTCTT-TA----C--CTTCCT
i Trachypithecus_hatinhensis.k141_357672                C 0 C 0
s Trachypithecus_laotum.k141_171445                          3115 46 +      3528 ACAA------CAAAT-GCG-GGACATGCT---------TTCTCT---GAAC-TCTCTT-TA----C--CTTCCT
i Trachypithecus_laotum.k141_171445                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  49482 46 +     51589 ACAA------CAAAT-GCG-GGACATGCT---------TTCTCT---GAAC-TCTCTT-TA----C--CTTCCT
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       12658 46 +     14732 ACAA------CAAAT-GCG-GGACATGCT---------TTCTCT---GAAC-TCTCTT-TA----C--CTTCCT
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       3135 46 -     28054 ACAA------CAAAT-GCG-GGACATGCT---------TTCTCT---GAAC-TCTCTT-TA----C--CTTCCT
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44657930 46 -  44834318 ACAA------CAAAT-GCG-GGACATGCT---------TTCTCT---GAAC-TCTCTT-TA----C--CTTCCT
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        2939 46 +      3372 ACAA------CAAAT-GCG-GGACATGCT---------TTCTCT---GAAC-TCTCTT-TA----C--CTTCCT
i Trachypithecus_pileatus.k141_469329                   C 0 C 0
s Tupaia_chinensis.KB320831.1                             2791088 47 -   3938065 acag------caaat-gcaggaagagact---------ttctca---gaac-ttctct-ta----t--ctgcct
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    3349 47 +     13056 acag------caaat-gcagggggagact---------ttctca---gaac-ttctct-ta----t--ctgcct
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Varecia_rubra.k141_432109                                  3696 46 -     20643 acag------caaat-gca-ggagaagct---------ttctct---aaac-tcccct-ta----t--ttgcct
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             23238 46 -     33872 acag------caaat-gca-ggagaagct---------ttctct---aaac-tcccct-ta----t--ttgcct
i Varecia_variegata.k141_775891                         C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       125481 35 -    134049 --------------------agaaaagct---------ttcttg---gaag-tcctct-ta----aaact-gtt
i Xerus_inauris.XerIna_scaffold_7898                    I 7 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     13697 47 -     20485 acag------caaat-ggtagcagaggct---------ttctgt---gagc-tcccct-tc----t--tcttct
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
e Eptesicus_fuscus.JH977687.1                             4702558 570 +   6522550 T
e Macroglossus_sobrinus.MacSob_scaffold_879                700405 588 +    802869 T
e Sorex_araneus.JH798170.1                               17749433 999 -  27805282 T
e Erinaceus_europaeus.JH835290.1                         11531295 619 +  16010500 T
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           1627  0 -      6963 C
e Suricata_suricatta.SurSur_flattened_line_20339            25749 587 +     62062 T
e Chrysochloris_asiatica.ChrAsi_scaffold_141308              8820 2035 -     12508 T
e Ziphius_cavirostris.ZipCav_flattened_line_127025           5743 596 -      8775 T
e Zalophus_californianus.ZalCal_flattened_line_4097        212466 605 -    227762 T
e Vulpes_lagopus.VulLag_flattened_line_2045                135938 606 -    281493 T
e Vicugna_pacos.KN269600.1                                1523470 590 -   2331223 T
e Ursus_maritimus.KK498671.1                              6513003 615 +  28682327 T
e Uropsilus_gracilis.UroGra_scaffold_139357                   696  0 +      2103 C
e Tursiops_truncatus.MRVK01000923.1                      69312246 595 -  96451834 T
e Trichechus_manatus.JH594618.1                          16081379 1856 +  31416278 T
e Tragulus_javanicus.TraJav_scaffold_14717                   4003 576 +     90398 T
e Tonatia_saurophila.TonSau_scaffold_3334                  134662 575 -    259118 T
e Tolypeutes_matacus.TolMat_scaffold_269431                  4396 2563 +      6782 T
e Tapirus_terrestris.TapTer_scaffold_14939                  56190 591 +     99546 T
e Tapirus_indicus.TapInd_scaffold_176                      805530 592 +   1148477 T
e Tamandua_tetradactyla.TamTet_scaffold_26877               13539 590 +     45698 T
e Tadarida_brasiliensis.TadBra_scaffold_145589               4581 564 -      6213 T
e Sus_scrofa.CM000824.4                                 189270675 604 + 218635234 T
e Spilogale_gracilis.SpiGra_flattened_line_905             233196 596 -    276980 T
e Solenodon_paradoxus.SolPar_flattened_line_1012            16792 573 +    739146 T
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   30171 591 -    114521 T
e Saiga_tatarica.SaiTat_scaffold_82192                       6411 583 +     12214 T
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                18082 592 +    109198 T
e Rhinolophus_sinicus.LVEH01000179.1                      1786602 584 +   2252614 T
e Rangifer_tarandus.RanTarSib_scaffold_24239                14609 588 +     68503 T
e Puma_concolor.QAVW01000427.1                          131532510 588 - 161321710 T
e Pteropus_vampyrus.KN525959.1                             602742 594 -   3946241 T
e Pteropus_alecto.KB031157.1                             13244792 595 -  17261082 T
e Pteronura_brasiliensis.PteBra_flattened_line_1343        244445 611 -    344369 T
e Pteronotus_parnellii.KE867983.1                            2652 575 -     27784 T
e Procavia_capensis.ProCapCap_scaffold_15315                76241 2096 +     78963 T
e Platanista_gangetica.PlaMin_flattened_line_72990           4214 597 +     21690 T
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            95634 565 +    112873 T
e Phocoena_phocoena.PhoPho_flattened_line_11948            120146 597 -    122454 T
e Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113863 604 -    135482 T
e Pantholops_hodgsonii.KE114631.1                         1064955 574 -   1292953 T
e Panthera_tigris.KE721879.1                              5025928 588 -   6340057 T
e Panthera_pardus.KV860323.1                              3636281 589 +  18214204 T
e Panthera_onca.PanOnc_flattened_line_1615                  32547 588 +    295523 T
e Ovis_canadensis.OviCan_scaffold_6251                      77308 574 +    140051 T
e Ovis_aries.CM001582.2                                 134076094 574 - 275406953 T
e Otocyon_megalotis.JAEUCK010005121.1                      305865 601 -    505867 T
e Orycteropus_afer.OryAfe_flattened_line_13509              43235 1921 -     66828 T
e Orcinus_orca.KB316965.1                                 7223529 597 -   7562323 T
e Okapia_johnstoni.LVCL01S0017931.1                         35827 729 +     78940 T
e Odocoileus_virginianus.KZ101650.1                       1078532 589 +   1425656 T
e Odobenus_rosmarus.KB229369.1                             677731 600 -   3126709 T
e Nyctereutes_procyonoides.CAJHUB010000786.1                28531 606 +   3668941 T
e Noctilio_leporinus.NocLep_scaffold_12062                  48091 568 +     94413 T
e Neophocaena_asiaeorientalis.KZ688543.1                  3949845 597 -   4490290 T
e Neomonachus_schauinslandi.NINY01007774.1                4483086 611 -  14209539 T
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3864 589 -      8794 T
e Myotis_myotis.MyoMyo_scaffold_6123                         8970 569 +     66751 T
e Myotis_lucifugus.GL429887.1                             3463776 570 -   3747815 T
e Myotis_davidii.KB114863.1                               5017879 569 +   6462685 T
e Myotis_brandtii.KE161952.1                               966190 571 +   8389877 T
e Mustela_putorius.JH417978.1                             4422351 610 -  28371801 T
e Murina_feae.MurFea_scaffold_2254                          17865 566 -    100666 T
e Mungos_mungo.MunMun_flattened_line_8729                  143083 585 -    168139 T
e Moschus_moschiferus.MosMos_scaffold_146101                 3404 589 -      4346 T
e Mormoops_blainvillei.MorMeg_scaffold_2952                159984 578 +    265003 T
e Monodon_monoceros.MonMon_M_scaffold_5598                 145232 596 +    154973 T
e Mirounga_angustirostris.MirAng_flattened_line_8852         9694 818 -    104932 T
e Miniopterus_schreibersii.MinSch_scaffold_24116            32901 573 +     45743 T
e Miniopterus_natalensis.LDJU01000022.1                   8208229 572 +  10048721 T
e Micronycteris_hirsuta.MicHir_scaffold_37978               21478 582 -     32043 T
e Microgale_talazaci.MicTal_scaffold_34660                  30484 1282 -     48017 T
e Mesoplodon_bidens.MesBid_scaffold_183284                   2166 255 +      2166 T
e Mellivora_capensis.MelCap_flattened_line_146202             779 605 -      1999 T
e Megaderma_lyra.MegLyr_scaffold_3562                       63204 732 -    234502 T
e Manis_pentadactyla.KN017078.1                             34979 596 +     58827 T
e Manis_javanica.JSZB01003966.1                            144904 595 +    252755 T
e Lycaon_pictus.CM007556.1                               11085538 606 +  39895028 T
e Loxodonta_africana.GL010040.1                          20590917 1859 -  62548349 T
e Lipotes_vexillifer.KE558548.1                            134797 598 +   3060487 T
e Leptonychotes_weddellii.KB714749.1                      3084186 615 -   3498232 T
e Lasiurus_borealis.LasBor_scaffold_5102                   112354 573 -    115756 T
e Kogia_breviceps.KogBre_flattened_line_35920               22464 592 +     37189 T
e Inia_geoffrensis.IniGeo_flattened_line_66725               7632 591 +     17520 T
e Hyaena_hyaena.HyaHya_flattened_line_20729                 14487 630 -     67322 T
e Hipposideros_galeritus.HipGal_scaffold_104691              6355 566 -      9143 T
e Hipposideros_armiger.JXIK01001085.1                      277196 565 -    477199 T
e Hippopotamus_amphibius.HipAmp_scaffold_1308              145879 587 +    277961 T
e Heterohyrax_brucei.HetBruBak_scaffold_25354               56377 2096 +     73687 T
e Hemitragus_hylocrius.HemHyl_scaffold_16669                26300 573 -     91191 T
e Helogale_parvula.HelPar_flattened_line_22962              15392 589 +     53719 T
e Giraffa_tippelskirchi.LVKQ01S012154.1                    180102 874 -    189561 T
e Felis_nigripes.FelNig_flattened_line_8080                 19352 584 +     52776 T
e Felis_catus_fca126.CM031420.1                         129278217 584 - 158578461 T
e Eubalaena_japonica.EubJap_flattened_line_7756             60304 620 +     89355 T
e Eschrichtius_robustus.EscRob_flattened_line_685          313850 596 +    330699 T
e Equus_przewalskii.ATBW01073585.1                          11740 861 +     92910 T
e Equus_caballus.CM000402.2                              13350250 861 +  41866177 T
e Equus_asinus.JREZ01000062.1                             5851747 860 -   7175178 T
e Enhydra_lutris.KZ291749.1                              85869969 610 +  99434291 T
e Elephantulus_edwardii.JH947210.1                        7805914 1445 +  15467074 T
e Elaphurus_davidianus.JRFZ01086400.1                     1490302 589 +   1727528 T
e Eidolon_helvum.KE772537.1                                 10991 592 +     24177 T
e Echinops_telfairi.JH980316.1                           22994071  0 -  44670279 C
e Diceros_bicornis.DicBicMic_scaffold_9545                   1977 1182 +    151128 T
e Dicerorhinus_sumatrensis.PEKH010003161.1                 321325 1172 +    993696 T
e Desmodus_rotundus.KZ672188.1                           18697602 573 -  18957592 T
e Delphinapterus_leucas.KZ290064.1                       80035644 592 -  96802777 T
e Dasypus_novemcinctus.JH568778.1                          182464 2581 -   6883506 T
e Cryptoprocta_ferox.CryFer_flattened_line_19014            50184 590 -     70449 T
e Crocidura_indochinensis.CroInd_scaffold_38409             18475 566 -     19186 T
e Craseonycteris_thonglongyai.CraTho_scaffold_22679         38414 982 -     40477 T
e Condylura_cristata.JH655880.1                          60611428 454 +  78930452 T
e Choloepus_hoffmanni.KN194586.1                           760580 596 +    964067 T
e Choloepus_didactylus.ChoDid_scaffold_36182                15269 596 -     21363 T
e Ceratotherium_simum_cottoni.CerCot_scaffold_160623         2430 1181 -      9338 T
e Catagonus_wagneri.CatWag_scaffold_1305                   157578 564 -    276539 T
e Carollia_perspicillata.CarPer_scaffold_4436               58293 574 +     67245 T
e Capra_hircus.CM004562.1                               135705256 574 - 157403528 T
e Capra_aegagrus.CM003214.1                              21324029 574 + 157394656 T
e Canis_lupus_orion.HG994411.1                           16453106 606 -  44759192 T
e Canis_lupus_familiaris.chr31                           11086082 606 +  39895921 T
e Canis_lupus_dingo.QKWQ01001993.1                       11263553 606 -  35597290 T
e Canis_lupus_VD.CanFam_VD_scaffold_16982                   11910 606 +     87036 T
e CanFam4.chr31                                          11516892 606 +  39901454 T
e Camelus_ferus.KB016973.1                                2971801 593 +   6889770 T
e Camelus_dromedarius.KN271192.1                           396068 594 -  15254737 T
e Camelus_bactrianus.KN276303.1                           3218363 593 -   8989139 T
e Bubalus_bubalis.KI419065.1                              1229773 588 -   1914593 T
e Bos_taurus.CM000177.6                                 136294018 589 - 158972876 T
e Bos_mutus.JH883513.1                                     570659 589 -    998990 T
e Bos_indicus.CM003021.1                                138138285 589 - 161108492 T
e Bison_bison.KN264915.1                                  6558046 589 +   6870073 T
e Beatragus_hunteri.BeaHun_scaffold_21644                   42015 569 -     72089 T
e Balaenoptera_bonaerensis.DF502048.1                        4197 598 -     13118 T
e Balaenoptera_acutorostrata.KI537095.1                  26378965 597 +  51448160 T
e Artibeus_jamaicensis.ArtJam_scaffold_41619                 7496 576 -     29036 T
e Antilocapra_americana.AntAmePen_scaffold_42841            29534 583 +     33004 T
e Anoura_caudifer.AnoCau_scaffold_422                      389095 570 -    631301 T
e Ammotragus_lervia.NIVO01013474.1                        3518953 602 +   4113121 T
e Ailurus_fulgens.LNAC01000003.1                          7092441 814 -  16596857 T
e Ailuropoda_melanoleuca.LNAT01000321.1                  10655516 614 +  23371972 T
e Acinonyx_jubatus.LLWD01000356.1                         2032169 587 +   3721120 T
e Piliocolobus_kirkii.k141_557609                           19957 700 +     19957 T
e Macaca_tonkeana.k141_2870633                               2864 158 -     27140 T
e Macaca_nigra.k141_282495                                   2859 158 -     46448 T
e Macaca_maura.k141_251854                                  43912 158 -     79256 T

a score=0.000000
s hg38.chr4_GL000008v2_random                               10233 18 +    209709 CA----A----GA-------G--AGAT--C------C-TCCAA-------A
s Acomys_cahirinus.AcoCah_scaffold_1625                    110974 13 -    189883 aa----a----g--------C--ATAT--T------T-TT-----------
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 T 822
s Allactaga_bullata.AllBul_scaffold_70162                   11415 14 -     22067 aa----a----ga-------c--agat--c------t-cc-----------
i Allactaga_bullata.AllBul_scaffold_70162               C 0 T 833
s Allenopithecus_nigroviridis.k141_3103707                  61247 18 +     61638 AA----A----GA-------G--ACAT--C------C-TCCAA-------A
i Allenopithecus_nigroviridis.k141_3103707              C 0 T 742
s Allochrocebus_lhoesti.k141_4825038                        53059 18 +     53391 AA----A----GA-------G--ACAT--C------C-TCCAA-------A
i Allochrocebus_lhoesti.k141_4825038                    C 0 T 746
s Allochrocebus_preussi.k141_1202907                         3784 18 +     72529 AA----A----GA-------G--ACAT--C------C-TCCAA-------A
i Allochrocebus_preussi.k141_1202907                    C 0 T 746
s Allochrocebus_solatus.k141_787528                          3359 18 +      3797 AA----A----GA-------G--ATAT--C------C-TCCAA-------A
i Allochrocebus_solatus.k141_787528                     C 0 T 746
s Alouatta_belzebul.k141_1818029                             8510  9 -     18050 --------------------------T--C------C-TCCTA-------A
i Alouatta_belzebul.k141_1818029                        I 5 T 715
s Alouatta_caraya.k141_5460                                  9623  9 -     11521 --------------------------T--C------C-TCCTA-------A
i Alouatta_caraya.k141_5460                             I 5 T 715
s Alouatta_discolor.k141_811576                              9187  9 -     21359 --------------------------T--C------C-TCCTA-------A
i Alouatta_discolor.k141_811576                         I 5 T 715
s Alouatta_juara.k141_298055                                  478  9 +      1823 --------------------------T--C------C-TCCTA-------A
i Alouatta_juara.k141_298055                            I 51 C 0
s Alouatta_macconnelli.k141_1331706                          8478  9 -     10438 --------------------------T--C------C-TCCTA-------A
i Alouatta_macconnelli.k141_1331706                     I 5 T 715
s Alouatta_nigerrima.k141_2718643                            5134  9 +      7047 --------------------------T--C------C-TCCTA-------A
i Alouatta_nigerrima.k141_2718643                       I 5 T 715
s Alouatta_palliata.k141_1316127                             8419  9 +     10410 --------------------------T--C------C-TCCTA-------A
i Alouatta_palliata.k141_1316127                        I 5 T 714
s Alouatta_puruensis.k141_1284840                            2223  9 -      4927 --------------------------T--C------C-TCCTA-------A
i Alouatta_puruensis.k141_1284840                       I 5 T 715
s Alouatta_seniculus.k141_990213                             5153  9 +      6429 --------------------------T--C------C-TCCTA-------A
i Alouatta_seniculus.k141_990213                        I 5 T 715
s Aotus_azarae.k141_3170768                                 60876  9 +     78111 --------------------------T--T------C-TTCAA-------A
i Aotus_azarae.k141_3170768                             I 5 T 718
s Aotus_griseimembra.k141_3275623                            3817  9 +     22701 --------------------------T--T------C-TTCAA-------A
i Aotus_griseimembra.k141_3275623                       I 5 T 721
s Aotus_nancymaae.KZ196176.1                              5747774  9 +   9889416 --------------------------T--T------C-TTCAA-------A
i Aotus_nancymaae.KZ196176.1                            I 5 T 720
s Aotus_trivirgatus.k141_1740727                             4359  9 -    104377 --------------------------T--T------C-TTCAA-------A
i Aotus_trivirgatus.k141_1740727                        I 5 T 720
s Aotus_vociferans.k141_718647                               4365  9 +     23246 --------------------------T--T------C-TTCAA-------A
i Aotus_vociferans.k141_718647                          I 5 T 720
s Aplodontia_rufa.AprRuf_scaffold_156013                     2362 14 +      5067 CA----A----AG-------t--agat--c------c-tc-----------
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 T 706
s Arctocebus_calabarensis.k141_1161114                      16298 22 +     17483 aa----a----ga-------c--aggC--C------C-TCAAAACAA---A
i Arctocebus_calabarensis.k141_1161114                  C 0 T 703
s Ateles_geoffroyi_b.tarseq_2582                             9537609  9 +  39197703 --------------------------T--C------C-TCCTA-------A
i Ateles_geoffroyi_b.tarseq_2582                           I 5 T 702
s Ateles_belzebuth.k141_1348307                             58893  9 +     85812 --------------------------T--C------C-TCCTA-------A
i Ateles_belzebuth.k141_1348307                         I 5 T 702
s Ateles_chamek.k141_1072810                                 9892  9 +     89302 --------------------------T--C------C-TCCTA-------A
i Ateles_chamek.k141_1072810                            I 5 T 702
s Ateles_geoffroyi_a.k141_1300742                             14397  9 -     58268 --------------------------T--C------C-TCCTA-------A
i Ateles_geoffroyi_a.k141_1300742                         I 5 T 702
s Ateles_marginatus.k141_899112                             62388  9 +    119057 --------------------------T--C------C-TCCTA-------A
i Ateles_marginatus.k141_899112                         I 5 T 702
s Ateles_paniscus.k141_1631200                               4357  9 -     25888 --------------------------T--C------C-TCCTA-------A
i Ateles_paniscus.k141_1631200                          I 5 T 720
s Avahi_laniger.k141_2840928                                 5124 18 -     16375 aa----a----ga-------c--agat--c------t-tccag-------a
i Avahi_laniger.k141_2840928                            C 0 T 744
s Avahi_peyrierasi.k141_2689020                              1443 18 +      2719 aa----a----ga-------c--agat--c------t-tccag-------a
i Avahi_peyrierasi.k141_2689020                         C 0 T 743
s Cacajao_ayresi.k141_724503                               112242 18 -    171031 AA----A----GA-------A--AGAT--C------C-TCCAA-------A
i Cacajao_ayresi.k141_724503                            C 0 T 720
s Cacajao_calvus.k141_96166                                 11268 18 +    125063 AA----A----GA-------A--AGAT--C------C-TCCAA-------A
i Cacajao_calvus.k141_96166                             C 0 T 720
s Cacajao_hosomi.k141_303789                                13316 18 -    216513 AA----A----GA-------A--AGAT--C------C-TCCAA-------A
i Cacajao_hosomi.k141_303789                            C 0 T 720
s Cacajao_melanocephalus.k141_1160263                        5856 18 -    134917 AA----A----GA-------A--AGAT--C------C-TCCAA-------A
i Cacajao_melanocephalus.k141_1160263                   C 0 T 720
s Capromys_pilorides.CapPil_scaffold_979108                   452  9 -      1248 --------------------c--tgat--c------t-tt-----------
i Capromys_pilorides.CapPil_scaffold_979108             C 0 I 44
s Carlito_syrichta.NW_007248099.1                          307474 18 +    345090 aa----a----gg-------t--aaat--c------t-tccaa-------g
i Carlito_syrichta.NW_007248099.1                       C 0 T 721
s Castor_canadensis.CasCan_scaffold_47037                   28928 14 +     33760 aa----a----ga-------c--agat--c------t-ca-----------
i Castor_canadensis.CasCan_scaffold_47037               C 0 T 739
s Cavia_aperea.AVPZ01000278.1                            15785085 14 -  24422027 AA----A----GT-------C--AGAT--C------T-TC-----------
i Cavia_aperea.AVPZ01000278.1                           C 0 T 724
s Cavia_porcellus.DS562889.1                             15797019 14 -  24440124 AA----A----GT-------C--AGAT--C------T-TC-----------
i Cavia_porcellus.DS562889.1                            C 0 T 726
s Cavia_tschudii.CavTsc_scaffold_488                       175210 14 +    436027 aa----a----gt-------c--agat--c------t-tc-----------
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 T 726
s Cebus_albifrons.Contig22                               18889108  9 -  29618158 --------------------------T--C------C-TCCGA-------A
i Cebus_albifrons.Contig22                              I 9 T 725
s Cebus_olivaceus.k141_93739                                 6652  9 -     26817 --------------------------T--C------C-TCCGA-------A
i Cebus_olivaceus.k141_93739                            I 9 T 725
s Cebus_unicolor.k141_239009                                10892  9 +     25043 --------------------------T--C------C-TCCGA-------A
i Cebus_unicolor.k141_239009                            I 9 T 722
s Cephalopachus_bancanus.k141_702587                         6507 18 +     21754 aa----a----gg-------t--aaat--c------t-tccaa-------g
i Cephalopachus_bancanus.k141_702587                    C 0 T 717
s Cercocebus_atys.KQ010443.1                              6553043  6 +   6739814 AA----a----ga-------g------------------------------
i Cercocebus_atys.KQ010443.1                            C 0 T 734
s Cercocebus_chrysogaster.k141_2951608                      54520  6 -     54931 AA----A----GA-------G------------------------------
i Cercocebus_chrysogaster.k141_2951608                  C 0 T 734
s Cercocebus_lunulatus.k141_3387186                         19504  6 -     19697 AA----A----GA-------G------------------------------
i Cercocebus_lunulatus.k141_3387186                     C 0 T 734
s Cercocebus_torquatus.k141_3969582                         57035  6 -    107033 AA----A----GA-------G------------------------------
i Cercocebus_torquatus.k141_3969582                     C 0 T 734
s Cercopithecus_ascanius.k141_3371259                        3475 18 -      3853 AA----A----GA-------G--ACAT--C------C-TTCAA-------A
i Cercopithecus_ascanius.k141_3371259                   C 0 T 722
s Cercopithecus_cephus.k141_598190                          27406 18 +     30494 AA----A----GA-------G--ACAT--C------C-TTCAA-------A
i Cercopithecus_cephus.k141_598190                      C 0 T 739
s Cercopithecus_diana.k141_1490386                           3435 18 -      4022 AA----A----GA-------G--ACAT--C------C-TCCAA-------A
i Cercopithecus_diana.k141_1490386                      C 0 T 744
s Cercopithecus_hamlyni.k141_381099                          3324 18 -      3505 AA----A----GA-------G--ACAT--C------C-ACCAA-------A
i Cercopithecus_hamlyni.k141_381099                     C 0 T 740
s Cercopithecus_lowei.k141_623764                           22112 18 +     35983 AA----A----GA-------G--ACAT--C------C-TCCAA-------A
i Cercopithecus_lowei.k141_623764                       C 0 T 738
s Cercopithecus_albogularis.ctg51                              11988649 18 +  12117833 AA----A----GA-------G--ACAT--C------C-TTCAA-------A
i Cercopithecus_albogularis.ctg51                             C 0 T 739
s Cercopithecus_mona.ctg12                               46475402 18 +  46592721 AA----A----GA-------G--ACAT--C------C-TCCAA-------A
i Cercopithecus_mona.ctg12                              C 0 T 739
s Cercopithecus_neglectus.k141_1474992                      33231 18 +     33420 AA----A----GA-------G--ACAT--C------C-TCCAA-------A
i Cercopithecus_neglectus.k141_1474992                  C 0 T 741
s Cercopithecus_nictitans.k141_675209                        3265 18 -      3443 AA----A----GA-------G--ACAT--C------C-TTCAA-------A
i Cercopithecus_nictitans.k141_675209                   C 0 T 739
s Cercopithecus_petaurista.k141_2037881                      4263 18 -      4669 AA----A----GA-------G--ACAT--C------C-TTCAA-------A
i Cercopithecus_petaurista.k141_2037881                 C 0 T 746
s Cercopithecus_pogonias.k141_1977419                        4051 18 -      4411 AA----A----GA-------G--ACAT--C------C-TCCAA-------A
i Cercopithecus_pogonias.k141_1977419                   C 0 T 739
s Cercopithecus_roloway.k141_3372345                         3586 18 -      4205 AA----A----GA-------G--ACAT--C------C-TCCAA-------A
i Cercopithecus_roloway.k141_3372345                    C 0 T 744
s Cheirogaleus_major.k141_1157592                           57428 18 -     68416 aa----a----ga-------c--agat--c------c-tccag-------a
i Cheirogaleus_major.k141_1157592                       C 0 T 743
s Cheirogaleus_medius.k141_133808                            6470 18 +     13308 aa----a----ga-------c--agat--c------c-cccag-------a
i Cheirogaleus_medius.k141_133808                       C 0 T 743
s Cheracebus_lucifer.k141_619653                             3904 18 -     18223 AA----A----GA-------A--AGAT--C------C-TCCAA-------A
i Cheracebus_lucifer.k141_619653                        C 0 T 713
s Cheracebus_lugens.k141_203936                             20927 18 +     25473 AA----A----GA-------A--AGAT--C------C-TCCAA-------A
i Cheracebus_lugens.k141_203936                         C 0 T 713
s Cheracebus_regulus.k141_2128895                           39966 18 +     57117 AA----A----GA-------A--AGAT--C------C-TCCAA-------A
i Cheracebus_regulus.k141_2128895                       C 0 T 713
s Cheracebus_torquatus.k141_315545                          44641 18 +     54541 AA----A----GA-------A--AGAT--C------C-TCCAA-------A
i Cheracebus_torquatus.k141_315545                      C 0 T 713
s Chinchilla_lanigera.JH721867.1                         15960237 14 +  43084221 ag----a----ga-------c--agat--c------t-tc-----------
i Chinchilla_lanigera.JH721867.1                        C 0 T 710
s Chiropotes_israelita.k141_1189915                         69451 18 +    196370 AA----A----GA-------A--AGAT--C------C-TCCAA-------A
i Chiropotes_israelita.k141_1189915                     C 0 T 707
s Chiropotes_sagulatus.k141_773804                          13631 18 +     40510 AA----A----GA-------A--AGAT--C------C-TCCAA-------A
i Chiropotes_sagulatus.k141_773804                      C 0 T 707
s Chlorocebus_aethiops.ctg22                             15136870 18 -  15256731 AA----A----GA-------G--ACAT--C------C-TCCAA-------A
i Chlorocebus_aethiops.ctg22                            C 0 T 746
s Chlorocebus_pygerythrus.k141_1486215                      31916 18 -     53260 AA----A----GA-------G--ACAT--C------C-TCCAA-------A
i Chlorocebus_pygerythrus.k141_1486215                  C 0 T 746
s Chlorocebus_sabaeus.CM001963.2                        101142365 18 + 101219884 AA----A----GA-------G--ATAT--C------C-TCcaa-------a
i Chlorocebus_sabaeus.CM001963.2                        C 0 T 746
s Colobus_angolensis.KN985967.1                          10887651 18 +  10971483 GA----A----GA-------T--ATAT--C------C-TCCaa-------a
i Colobus_angolensis.KN985967.1                         C 0 T 7453
s Colobus_guereza.LG08                                  147662404 18 + 156195979 GA----A----GA-------T--ATAT--C------C-TCCAA-------A
i Colobus_guereza.LG08                                  C 0 T 1048
s Colobus_polykomos.k141_1406057                            14392 18 +     23629 GA----A----GA-------T--ATAT--C------C-TCCAA-------A
i Colobus_polykomos.k141_1406057                        C 0 T 1049
s Cricetomys_gambianus.CriGam_scaffold_949                 276846 13 -    399297 aa----a----g--------c--atag--t------t-tt-----------
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 T 1605
s Cricetulus_griseus.LT883672.1                          53027492 13 +  72327488 ga----a----g--------c--aTAT--T------T-TC-----------
i Cricetulus_griseus.LT883672.1                         C 0 T 718
s Ctenodactylus_gundi.CteGun_scaffold_447                  206654 14 -    956709 aa----a----ga-------c--agat--a------c-tc-----------
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 T 709
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 29190 24 -     67205 TAATGAG----AA-------A--AAAT--GATAAAAT-AG-----------
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 T 896
s Cuniculus_paca.CunPac_flattened_line_16637                16240 14 +     26546 aa----a----ga-------c--agat--c------t-tc-----------
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 T 1107
s Dasyprocta_punctata.DasPun_flattened_line_634             57342 14 -    236241 aa----g----ga-------c--ggtt--c------t-tc-----------
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 T 726
s Daubentonia_madagascariensis.ctg11                     16843285 18 +  31942871 aa----a----ga-------c--agat--c------c-tgcag-------a
i Daubentonia_madagascariensis.ctg11                    C 0 T 732
s Dinomys_branickii.DinBra_scaffold_1996                   156129 14 +    228994 ac----g----at-------c--agat--c------t-tc-----------
i Dinomys_branickii.DinBra_scaffold_1996                C 0 T 717
s Dipodomys_ordii.KN672545.1                              3654067  2 +   4240102 --------------------------T--C---------------------
i Dipodomys_ordii.KN672545.1                            I 4 T 894
s Dipodomys_stephensi.DipSte_scaffold_44365                 25710  2 +     28912 --------------------------T--C---------------------
i Dipodomys_stephensi.DipSte_scaffold_44365             I 4 T 980
s Dolichotis_patagonum.DolPat_scaffold_14102                34593 11 -     73477 -----------ga-------c--agat--c------t-tc-----------
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 T 713
s Ellobius_lutescens.LOEQ01003611.1                        238145 13 -    369425 ca----a----g--------c--aTAT--T------T-TC-----------
i Ellobius_lutescens.LOEQ01003611.1                     C 0 T 713
s Ellobius_talpinus.LOJH01090055.1                           5161 13 -      7838 ca----a----g--------t--atat--t------t-tc-----------
i Ellobius_talpinus.LOJH01090055.1                      C 0 T 716
s Erythrocebus_patas.Contig8                             48769048 18 -  48907691 AA----A----GA-------G--ACAT--C------C-TCCAA-------A
i Erythrocebus_patas.Contig8                            C 0 T 746
s Eulemur_albifrons.k141_715837                              3470 18 +     13586 aa----a----ga-------c--agat--c------c-tccag-------a
i Eulemur_albifrons.k141_715837                         C 0 T 738
s Eulemur_collaris.k141_311830                               3405 18 -      6809 aa----a----ga-------c--agat--c------c-tccag-------a
i Eulemur_collaris.k141_311830                          C 0 T 738
s Eulemur_coronatus.k141_3240342                             9880 18 +     36558 aa----a----ga-------c--agat--c------c-tccag-------a
i Eulemur_coronatus.k141_3240342                        C 0 T 737
s Eulemur_flavifrons.k141_903901                             6196 18 +     60246 aa----a----ga-------c--agat--c------c-tccag-------a
i Eulemur_flavifrons.k141_903901                        C 0 T 739
s Eulemur_fulvus.k141_653297                                 9678 18 +    109717 aa----a----ga-------c--agat--c------c-tccag-------a
i Eulemur_fulvus.k141_653297                            C 0 T 738
s Eulemur_macaco.k141_1341545                               14058 18 +     16540 aa----a----ga-------c--agat--c------c-tccag-------a
i Eulemur_macaco.k141_1341545                           C 0 T 739
s Eulemur_mongoz.k141_825972                                14333 18 +     27497 aa----a----ga-------c--agat--c------c-tccag-------a
i Eulemur_mongoz.k141_825972                            C 0 T 738
s Eulemur_rubriventer.k141_411740                           16790 18 +     26808 aa----a----ga-------c--agat--c------c-tccag-------a
i Eulemur_rubriventer.k141_411740                       C 0 T 729
s Eulemur_rufus.k141_1620292                                31523 18 +     46535 aa----a----ga-------c--agat--c------c-tccag-------a
i Eulemur_rufus.k141_1620292                            C 0 T 738
s Eulemur_sanfordi.k141_186399                              14246 18 -     29447 aa----a----ga-------c--agat--c------c-tccag-------a
i Eulemur_sanfordi.k141_186399                          C 0 T 738
s Fukomys_damarensis.KN123630.1                          13891189 14 -  19261668 ga----a----ga-------c--acat--c------t-tt-----------
i Fukomys_damarensis.KN123630.1                         C 0 T 707
s Galago_moholi.ctg555                                     209379 18 -    847004 aa----a----ga-------c--aggc--c------c-tcaaa-------c
i Galago_moholi.ctg555                                  C 0 T 728
s Galago_senegalensis.k141_964197                           11758 18 -     43889 aa----a----ga-------c--aggc--c------c-tcaaa-------c
i Galago_senegalensis.k141_964197                       C 0 T 726
s Galagoides_demidoff.k141_1769638                           8826 18 +     27357 aa----a----ga-------c--aggc--c------c-tcaaa-------c
i Galagoides_demidoff.k141_1769638                      C 0 T 730
s Galeopterus_variegatus.GalVar_scaffold_354               154742 18 +    324696 aa----g----ga-------c--agat--t------c-tccca-------a
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 T 732
s Glis_glis.GliGli_scaffold_79770                           11138 14 -     18683 aa----a----ag-------c--atgt--c------c-cc-----------
i Glis_glis.GliGli_scaffold_79770                       C 0 T 717
s Gorilla_beringei.k141_111300                               3632 18 -     14630 ca----a----GA-------G--AGAC--C------C-TCCGA-------A
i Gorilla_beringei.k141_111300                          C 0 T 742
s Gorilla_gorilla.LT578340.1                            119650731 18 - 195582420 ca----a----GA-------G--AGAC--C------C-TCCGA-------A
i Gorilla_gorilla.LT578340.1                            C 0 T 742
s Graphiurus_murinus.GraMur_scaffold_4493                   75879 14 +    118900 aa----a----ag-------c--atat--t------c-cc-----------
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 T 929
s Hapalemur_alaotrensis.k141_1280836                          295 18 +     10286 aa----a----GA-------c--agat--c------c-tccag-------a
i Hapalemur_alaotrensis.k141_1280836                    n 591 I 19
s Hapalemur_gilberti.k141_1254239                            8454  9 +      9690 --------------------------t--c------c-tccag-------a
i Hapalemur_gilberti.k141_1254239                       n 592 I 19
s Hapalemur_griseus.k141_1387522                             4074 18 +     56096 aa----a----GA-------c--agat--c------c-tccag-------a
i Hapalemur_griseus.k141_1387522                        I 237 T 845
s Hapalemur_meridionalis.k141_186231                        27350 18 -     42470 aa----a----GA-------c--agat--c------c-tccag-------a
i Hapalemur_meridionalis.k141_186231                    I 236 T 846
s Hapalemur_occidentalis.k141_797938                        43948 18 -     54384 aa----a----GA-------c--agat--c------c-tccag-------a
i Hapalemur_occidentalis.k141_797938                    I 240 T 850
s Heterocephalus_glaber.JH602058.1                        2549579 14 +  31725842 aa----g----ga-------c--acat--c------t-tc-----------
i Heterocephalus_glaber.JH602058.1                      C 0 T 716
s Hoolock_leuconedys.ctg903                                     4748 20 -     61166 AA----A----GA-------G--AAACCCC------C-CCCAA-------A
i Hoolock_leuconedys.ctg903                                T 2401 T 726
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           17489 14 -    119109 ac----a----ga-------c--agat--c------t-tc-----------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       I 6 T 711
s Hystrix_cristata.HysCri_scaffold_50788                     4631 14 +     22540 ac----a----gg-------t--agat--c------t-tc-----------
i Hystrix_cristata.HysCri_scaffold_50788                C 0 T 718
s Ictidomys_tridecemlineatus.JH393315.1                   7124498 14 +  13083262 aa----a----gg-------c--agat--c------c-tc-----------
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 T 719
s Indri_indri.k141_1884019                                   1717 18 -      2196 aa----a----ga-------c--agat--c------t-tccag-------a
i Indri_indri.k141_1884019                              C 0 T 749
s Jaculus_jaculus.JH725517.1                              8564162 14 +  11848649 aa----a----ga-------c--agat--c------t-cc-----------
i Jaculus_jaculus.JH725517.1                            C 0 T 840
s Lagothrix_lagothricha.k141_12968                          48478  9 -    147782 --------------------------T--C------C-TCCTA-------A
i Lagothrix_lagothricha.k141_12968                      I 5 T 717
s Lemur_catta.scaffold_1                                258405630 18 - 285822530 aa----a----GA-------c--agat--c------c-tccag-------a
i Lemur_catta.scaffold_1                                I 233 T 843
s Lepilemur_ankaranensis.k141_884009                        22400 18 +     39228 aa----a----ga-------c--agat--c------c-tccag-------a
i Lepilemur_ankaranensis.k141_884009                    C 0 T 741
s Lepilemur_dorsalis.k141_134267                            51775 18 +     63517 aa----a----ga-------c--agat--c------c-tccag-------a
i Lepilemur_dorsalis.k141_134267                        C 0 T 743
s Lepilemur_ruficaudatus.k141_617879                        77019 18 +    116806 aa----a----ga-------c--agat--c------c-tccag-------a
i Lepilemur_ruficaudatus.k141_617879                    C 0 T 745
s Lepilemur_septentrionalis.k141_578524                     30039 18 -     33031 aa----a----ga-------c--agat--c------c-tccag-------a
i Lepilemur_septentrionalis.k141_578524                 C 0 T 742
s Lepus_americanus.LepAme_scaffold_62849                    11479 17 +     22452 ca----t----gg-------c--agac--c------c-tcc-a-------a
i Lepus_americanus.LepAme_scaffold_62849                I 2 T 715
s Lophocebus_aterrimus.ctg55                             19246131  6 +  19376315 AA----A----GA-------G------------------------------
i Lophocebus_aterrimus.ctg55                            C 0 T 734
s Loris_lydekkerianus.k141_550999                            9122 25 +     84689 ga----g----ga-------c--aggC--T------C-TCAAAAAAAAAAA
i Loris_lydekkerianus.k141_550999                       C 0 T 730
s Loris_tardigradus.ctg97                                 3776873 25 +   6799190 ga----g----ga-------c--aggC--T------C-TCAAAAAAAAAAA
i Loris_tardigradus.ctg97                               C 0 T 730
s Macaca_arctoides.k141_2201161                             17806 10 +     74745 -------------------------AT--C------C-TCCAA-------A
i Macaca_arctoides.k141_2201161                         I 1 T 727
s Macaca_assamensis.Contig65                             12704315 18 +  12821369 AA----A----TA-------G--ACAT--C------C-TCCAA-------A
i Macaca_assamensis.Contig65                            C 0 T 738
s Macaca_cyclopis.k119_1168412                               6411 18 +      6569 AA----A----GA-------G--ACAT--C------C-TCCAA-------A
i Macaca_cyclopis.k119_1168412                          C 0 T 614
s Macaca_fascicularis.k141_155037                           44713 18 +     63263 AA----A----TA-------G--ACAT--C------C-TCCAA-------A
i Macaca_fascicularis.k141_155037                       C 0 T 738
s Macaca_fuscata.k119_925451                                  721 18 +     10231 AA----A----GA-------G--ACAT--C------C-TCCAA-------A
i Macaca_fuscata.k119_925451                            C 0 T 618
s Macaca_leonina.k141_3421209                                2862 18 +      3017 AA----A----GA-------G--ACAT--C------C-TCCAA-------A
i Macaca_leonina.k141_3421209                           C 0 T 738
s Macaca_mulatta.NC_041755.1                            196033392 18 + 196197964 AA----A----TA-------G--ACAT--C------C-TCcaa-------a
i Macaca_mulatta.NC_041755.1                            C 0 T 738
s Macaca_nemestrina.KQ004885.1                           11443498 18 +  11645122 AA----A----GA-------G--ACAT--C------C-TCcaa-------a
i Macaca_nemestrina.KQ004885.1                          C 0 T 738
s Macaca_radiata.k141_1580474                                3254 18 -      3617 AA----A----TA-------G--ACAT--C------C-TCCAA-------A
i Macaca_radiata.k141_1580474                           C 0 T 740
s Macaca_siberu.k141_741907                                 13584 18 -     55006 AA----A----GA-------G--ACAT--C------C-TCCAA-------A
i Macaca_siberu.k141_741907                             C 0 T 738
s Macaca_silenus.Contig12                                43838621 18 +  43892939 AA----A----GA-------G--ACAT--C------C-TCCAA-------A
i Macaca_silenus.Contig12                               C 0 T 738
s Macaca_thibetana.k99_116940                                5843 18 -      5978 AA----A----TA-------G--ACAT--C------C-TCCAA-------A
i Macaca_thibetana.k99_116940                           C 0 T 719
s Mandrillus_leucophaeus.scaffold125                     43435293  6 -  43563597 AA----A----GA-------G------------------------------
i Mandrillus_leucophaeus.scaffold125                    C 0 T 736
s Mandrillus_sphinx.Contig144                             4448119  6 -   4543643 AA----A----GA-------G------------------------------
i Mandrillus_sphinx.Contig144                           C 0 T 736
s Marmota_marmota.CZRN01000005.1                         36872333 14 +  64221397 aa----a----gg-------c--agat--c------c-tc-----------
i Marmota_marmota.CZRN01000005.1                        C 0 T 714
s Meriones_unguiculatus.MerUng_scaffold_52233               10428 13 +     15977 aa----a----g--------c--atat--t------t-tt-----------
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 T 698
s Mesocricetus_auratus.KB708139.1                         1045231 13 -  26018355 ga----a----g--------c--atat--t------t-cc-----------
i Mesocricetus_auratus.KB708139.1                       C 0 T 717
s Microcebus_murinus.CM007691.1                          16508645 18 +  47401472 aa----a----ga-------c--agat--c------c-tccag-------a
i Microcebus_murinus.CM007691.1                         C 0 T 738
s Microtus_ochrogaster.CM001673.1                        22818348 13 -  98408828 CG----A----G--------C--ATAT--T------T-TC-----------
i Microtus_ochrogaster.CM001673.1                       C 0 T 716
s Miopithecus_ogouensis.k141_2666161                        33948 18 +     34273 AA----A----GA-------G--ACAT--C------C-TCCAA-------A
i Miopithecus_ogouensis.k141_2666161                    C 0 T 744
s Mirza_zaza.k141_226143                                     4043 18 +      8497 AA----A----GA-------C--AAAT--C------C-TCCAG-------A
i Mirza_zaza.k141_226143                                C 0 T 731
s Mus_caroli.LT608236.1                                  70764840 13 +  92629107 GG----T----C--------T--GCAT--T------T-TG-----------
i Mus_caroli.LT608236.1                                 C 0 T 696
s Mus_musculus.chr16                                     75487876 13 +  98207768 GG----T----C--------T--GCAT--T------T-TT-----------
i Mus_musculus.chr16                                    C 0 T 695
s Mus_pahari.LT608305.1                                  67554064 13 +  89017189 GG----T----C--------T--GCAT--T------T-TT-----------
i Mus_pahari.LT608305.1                                 C 0 T 712
s Mus_spretus.CM004110.1                                 74329056 13 +  97876770 GG----A----C--------T--GCAT--T------T-TT-----------
i Mus_spretus.CM004110.1                                C 0 T 694
s Muscardinus_avellanarius.MusAve_scaffold_9643              9617 14 +     98495 ga----a----ag-------c--atat--c------c-cc-----------
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 T 714
s Myocastor_coypus.MyoCoy_scaffold_3653                     88517  9 -    117718 --------------------C--CGGT--C------T-TT-----------
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 T 657
s Nannospalax_galili.KL201303.1                            116664 14 +    362372 AA----A----TA-------C--AGAT--T------T-TC-----------
i Nannospalax_galili.KL201303.1                         C 0 T 8425
s Nasalis_larvatus.k141_153429                               6323 18 +     48152 GA----A----GA-------G--ATAT--C------C-TCCAA-------A
i Nasalis_larvatus.k141_153429                          C 0 T 740
s Nomascus_annamensis.k141_1439838                           1191 18 +      3718 aa----a----ga-------g--aaat--c------c-cccaa-------a
i Nomascus_annamensis.k141_1439838                      I 118 T 736
s Nomascus_concolor.k141_49591                               1414 18 +      2014 aa----a----ga-------g--aaac--c------c-cccaa-------a
i Nomascus_concolor.k141_49591                          C 0 T 736
s Nomascus_gabriellae.k141_642452                             339 18 +      2851 aa----a----ga-------g--aaat--c------c-cccaa-------a
i Nomascus_gabriellae.k141_642452                       C 0 I 19
s Nomascus_siki_b.tarseq_80                             23254 18 -  18771707 aa----a----ga-------g--aaat--c------c-cccaa-------a
i Nomascus_siki_b.tarseq_80                         C 0 T 772
s Nomascus_siki_a.k141_595747                                   967 18 +      4512 aa----a----ga-------g--aaac--c------c-cccaa-------a
i Nomascus_siki_a.k141_595747                             C 0 I 19
s Nycticebus_bengalensis.LG16                            65565575 25 -  95554990 aa----a----ga-------c--aggc--c------c-tcaaaaaagaaaa
i Nycticebus_bengalensis.LG16                           C 0 T 837
s Nycticebus_coucang.k141_2051882                            2303 25 +      6470 aa----a----ga-------c--aggc--c------c-tcaaaaaagaaaa
i Nycticebus_coucang.k141_2051882                       C 0 T 720
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65667923 25 +  89412551 aa----a----ga-------c--aggc--c------c-tcaaaaaagaaaa
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 T 815
s Ochotona_princeps.JH802095.1                            4994470 17 -  23139505 aa----a----GA-------g--agtt--a------t-ttc-a-------a
i Ochotona_princeps.JH802095.1                          C 0 T 731
s Octodon_degus.JH651621.1                                3684036 26 +  10294119 taatgag----ga-------aagaaat--tataaaat-aa-----------
i Octodon_degus.JH651621.1                              C 0 T 721
s Ondatra_zibethicus.OndZib_scaffold_6821                  123616 13 +    145789 ca----a----g--------c--atat--t------t-tc-----------
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 T 709
s Onychomys_torridus.OnyTor_scaffold_12578                  35368 13 +     62360 aa----a----a--------c--atat--t------t-tt-----------
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 T 706
s Oryctolagus_cuniculus.CM000803.1                      141874113 17 + 163896628 CA----A----GG-------C--AGAC--C------C-TCC-A-------A
i Oryctolagus_cuniculus.CM000803.1                      I 2 T 691
s Otolemur_crassicaudatus.k141_321880                       37469 18 +     38679 aa----a----ga-------c--aggc--c------c-tcaaa-------c
i Otolemur_crassicaudatus.k141_321880                   C 0 T 730
s Otolemur_garnettii.GL873528.1                          18006901 18 -  38779656 AA----A----GA-------C--AGgc--c------c-tcaaa-------c
i Otolemur_garnettii.GL873528.1                         C 0 T 720
s Pan_paniscus.CM003386.1                               127572976 18 - 205426864 CA----A----GA-------G--AGAC--C------C-TCCAA-------A
i Pan_paniscus.CM003386.1                               C 0 T 742
s Pan_troglodytes.KZ622857.1                               325958 18 +    772158 CA----A----GA-------G--AGAT--C------C-TCCAA-------A
i Pan_troglodytes.KZ622857.1                            I 275 I 124
s Papio_anubis.CM001492.2                               188154075  6 - 188283584 AA----a----ga-------g------------------------------
i Papio_anubis.CM001492.2                               C 0 T 734
s Papio_cynocephalus.k141_386926                            50287  6 +     76494 AA----A----GA-------G------------------------------
i Papio_cynocephalus.k141_386926                        C 0 T 734
s Papio_hamadryas.Contig15                               47511472  6 +  47705337 AA----A----GA-------G------------------------------
i Papio_hamadryas.Contig15                              C 0 T 734
s Papio_kindae.k141_5458022                                 65449  6 -    104429 AA----A----GA-------G------------------------------
i Papio_kindae.k141_5458022                             C 0 T 734
s Papio_papio.k141_3561084                                  15240  6 -     29451 AA----A----GA-------G------------------------------
i Papio_papio.k141_3561084                              C 0 T 582
s Papio_ursinus.k141_3762866                                35643  6 +     35859 AA----A----GA-------G------------------------------
i Papio_ursinus.k141_3762866                            C 0 T 734
s Perodicticus_ibeanus.k141_117958                           3511 25 -     23713 aa----a----ga-------c--aggc--c------c-tcaaaaccaaacc
i Perodicticus_ibeanus.k141_117958                      C 0 T 726
s Perodicticus_potto.k141_713187                            22809 25 -     27972 aa----a----ga-------c--aggc--c------c-tcaaaaccaaacc
i Perodicticus_potto.k141_713187                        C 0 T 725
s Perognathus_longimembris.PerPac_flattened_line_22291      41691  8 -     45160 AA----GGCAAA---------------------------------------
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 T 971
s Peromyscus_maniculatus.KI615518.1                       4948560 13 -   8017169 aa----a----g--------c--aTGT--T------T-TT-----------
i Peromyscus_maniculatus.KI615518.1                     C 0 T 722
s Petromus_typicus.PetTyp_scaffold_33007                    10731 14 -     36578 ga----g----ga-------c--gtgc--t------t-tc-----------
i Petromus_typicus.PetTyp_scaffold_33007                C 0 T 706
s Piliocolobus_badius.k141_1610110                          39088 18 +     39618 GA----A----GA-------G--ATAT--C------C-TCCAA-------A
i Piliocolobus_badius.k141_1610110                      C 0 n 0
s Piliocolobus_gordonorum.k141_1270531                        464 18 -     17985 GA----A----GA-------G--ATAT--C------C-TCCAA-------A
i Piliocolobus_gordonorum.k141_1270531                  C 0 I 578
s Piliocolobus_tephrosceles.PDMG02000036.1               26738309 18 +  26888534 GA----A----GA-------G--ATAT--C------C-TCCaa-------a
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 T 1056
s Pithecia_albicans.k141_991845                             41956 18 -     61926 AA----A----GA-------A--AGAT--C------C-TCCAA-------A
i Pithecia_albicans.k141_991845                         C 0 T 720
s Pithecia_chrysocephala.k141_159118                        23385 18 +     78826 AA----A----GA-------A--AGAT--C------C-TCCAA-------A
i Pithecia_chrysocephala.k141_159118                    C 0 T 720
s Pithecia_hirsuta.k141_1152968                              7336 18 -     15800 AA----A----GA-------A--AGAT--C------C-TCCAA-------A
i Pithecia_hirsuta.k141_1152968                         C 0 T 720
s Pithecia_mittermeieri.k141_2119203                        10534 18 -     16101 AA----A----GA-------A--AGAT--C------C-TCCAA-------A
i Pithecia_mittermeieri.k141_2119203                    C 0 T 720
s Pithecia_pissinattii.k141_1102319                          3843 18 +      9673 AA----A----GA-------A--AGAT--C------C-TCCAA-------A
i Pithecia_pissinattii.k141_1102319                     C 0 T 720
s Pithecia_pithecia.tarseq_313                           13472837 18 -  19735023 AA----A----GA-------A--AGAT--C------C-TCCAA-------A
i Pithecia_pithecia.tarseq_313                          C 0 T 720
s Pithecia_vanzolinii.k141_831006                           11745 18 -     31692 AA----A----GA-------A--AGAT--C------C-TCCAA-------A
i Pithecia_vanzolinii.k141_831006                       C 0 T 720
s Plecturocebus_bernhardi.k141_959214                       21181 18 +     44506 AA----A----GA-------A--AGAT--C------C-TCCAA-------A
i Plecturocebus_bernhardi.k141_959214                   C 0 T 725
s Plecturocebus_brunneus.k141_498086                        21391 18 +     67491 AA----A----GA-------A--AGAT--C------C-TCCAA-------A
i Plecturocebus_brunneus.k141_498086                    C 0 T 725
s Plecturocebus_caligatus.k141_2539816                      11632 18 -     98129 AA----A----GA-------A--AGAT--C------C-TCCAA-------A
i Plecturocebus_caligatus.k141_2539816                  C 0 T 725
s Plecturocebus_cinerascens.k141_744510                     21237 18 +    147771 AA----A----GA-------A--AGAT--C------C-TCCAA-------A
i Plecturocebus_cinerascens.k141_744510                 C 0 T 725
s Plecturocebus_cupreus.k141_1223294                        21486 18 -     23762 AA----A----GA-------A--AGAT--C------C-TCCAA-------A
i Plecturocebus_cupreus.k141_1223294                    C 0 T 724
s Plecturocebus_dubius.k141_3565563                          1953 18 -     55515 AA----A----GA-------A--AGAT--C------C-TCCAA-------A
i Plecturocebus_dubius.k141_3565563                     C 0 T 725
s Plecturocebus_grovesi.k141_242819                         21306 18 +    152463 AA----A----GA-------A--AGAT--C------C-TCCAA-------A
i Plecturocebus_grovesi.k141_242819                     C 0 T 725
s Plecturocebus_hoffmannsi.k141_1595076                      8066 18 +      8943 AA----A----GA-------A--AGAT--C------C-TCCAA-------A
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 T 725
s Plecturocebus_miltoni.k141_841561                         11026 18 +    134592 AA----A----GA-------A--AGAT--C------C-TCCAA-------A
i Plecturocebus_miltoni.k141_841561                     C 0 T 725
s Plecturocebus_moloch.k141_890597                          21616 18 -     75465 AA----A----GA-------A--AGAT--C------C-TCCAA-------A
i Plecturocebus_moloch.k141_890597                      C 0 T 725
s Pongo_abelii.NDHI03003816.1                              185520 16 -    373494 CA----A----GA-------G----AC--C------C-TCCAA-------A
i Pongo_abelii.NDHI03003816.1                           C 0 T 739
s Pongo_pygmaeus.ctg62                                   19805428 16 +  19899266 ca----a----ga-------g----ac--c------c-tccaa-------a
i Pongo_pygmaeus.ctg62                                  C 0 T 740
s Presbytis_comata.k141_672698                               3567 18 -     15069 GA----A----GA-------G--ATAT--C------C-TCCAA-------A
i Presbytis_comata.k141_672698                          C 0 T 746
s Presbytis_mitrata.k141_860013                              3701 18 +     14865 GA----A----GA-------G--ATAT--C------C-TCCAA-------A
i Presbytis_mitrata.k141_860013                         C 0 T 746
s Prolemur_simus.MPIZ01000048.1                           6847011 18 +  12164890 aa----a----ga-------c--agat--c------c-TCCAG-------A
i Prolemur_simus.MPIZ01000048.1                         I 238 T 848
s Propithecus_coquerelli.NW_012147997.1                    666220 18 -   2312742 aa----a----ga-------c--agat--c------t-tccag-------a
i Propithecus_coquerelli.NW_012147997.1                 C 0 T 1440
s Propithecus_coronatus.k141_1353159                         2050 18 +     11805 aa----a----ga-------c--agat--c------t-tccag-------a
i Propithecus_coronatus.k141_1353159                    C 0 T 743
s Propithecus_diadema.k141_577245                           41385 18 +     52369 aa----a----ga-------c--agat--c------t-tccag-------a
i Propithecus_diadema.k141_577245                       C 0 T 744
s Propithecus_edwardsi.k141_1317105                         33774 18 -     44753 aa----a----ga-------c--agat--c------t-tccag-------a
i Propithecus_edwardsi.k141_1317105                     C 0 T 744
s Propithecus_perrieri.k141_7554                            15695 18 +     27322 aa----a----ga-------c--agat--c------t-tccag-------a
i Propithecus_perrieri.k141_7554                        C 0 T 744
s Propithecus_tattersalli.k141_907138                       15334 18 -     53241 aa----a----ga-------c--agat--c------t-tccag-------a
i Propithecus_tattersalli.k141_907138                   C 0 T 744
s Propithecus_verreauxi.k141_158021                         37605 18 -     48185 aa----a----ga-------c--agat--c------t-tccag-------a
i Propithecus_verreauxi.k141_158021                     C 0 T 743
s Psammomys_obesus.NESX01026517.1                           31978 13 +     77221 ga----a----g--------c--aTAT--T------T-TT-----------
i Psammomys_obesus.NESX01026517.1                       C 0 T 709
s Pygathrix_cinerea.k141_374971                             27690 18 +     56732 GA----A----GA-------G--ATAT--C------C-TCCAA-------A
i Pygathrix_cinerea.k141_374971                         C 0 T 740
s Pygathrix_nigripes_b.ctg79                                 6804181 18 +   6970761 GA----A----GA-------G--ATAT--C------C-TCCAA-------A
i Pygathrix_nigripes_b.ctg79                               C 0 T 740
s Pygathrix_nigripes_a.k141_101123                             3575 18 +     18040 GA----A----GA-------G--ATAT--C------C-TCCAA-------A
i Pygathrix_nigripes_a.k141_101123                        C 0 T 741
s Rattus_norvegicus.chr11                                13913927  1 +  90463843 G--------------------------------------------------
i Rattus_norvegicus.chr11                               C 0 T 670
s Rhinopithecus_bieti.k119_102124                           14129 18 -     14454 GA----A----GA-------G--ATAT--C------C-TCCAA-------A
i Rhinopithecus_bieti.k119_102124                       C 0 T 742
s Rhinopithecus_roxellana.NC_044549.1                   206375455 18 - 206558726 GA----A----GA-------G--ATAT--C------C-TCCAA-------A
i Rhinopithecus_roxellana.NC_044549.1                   C 0 T 742
s Rhinopithecus_strykeri.ctg4                            44853103 13 -  45163003 GA----A----GA-------G--ATAT--C------C-T------------
i Rhinopithecus_strykeri.ctg4                           C 0 T 737
s Saimiri_boliviensis.NW_024100938.1                     15671063  9 -  43202129 --------------------------T--C------C-TCCAA-------A
i Saimiri_boliviensis.NW_024100938.1                    I 9 T 703
s Saimiri_cassiquiarensis.k141_808270                        2929  9 +     34089 --------------------------T--C------C-TCCAA-------A
i Saimiri_cassiquiarensis.k141_808270                   I 9 T 703
s Saimiri_macrodon.k141_2087127                              2870  9 -     60842 --------------------------T--C------C-TCCAA-------A
i Saimiri_macrodon.k141_2087127                         I 9 T 703
s Saimiri_oerstedii.k141_841116                              2965  9 +     67014 --------------------------T--C------C-TCCAA-------A
i Saimiri_oerstedii.k141_841116                         I 9 T 703
s Saimiri_sciureus.k141_1947592                              2943  9 +     60816 --------------------------T--C------C-TCCAA-------A
i Saimiri_sciureus.k141_1947592                         I 9 T 703
s Saimiri_ustus.k141_1282476                                 2880  9 -     76454 --------------------------T--C------C-TCCAA-------A
i Saimiri_ustus.k141_1282476                            I 9 T 703
s Sapajus_apella.ctg10                                   17339635  9 -  30362882 --------------------------T--C------C-TCCGA-------A
i Sapajus_apella.ctg10                                  I 9 T 724
s Sapajus_macrocephalus.k141_966464                         19010  9 -     62485 --------------------------T--C------C-TCCGA-------A
i Sapajus_macrocephalus.k141_966464                     I 9 T 724
s Semnopithecus_entellus.k141_1527475                       26119 18 +     26421 GA----A----GA-------G--ATAT--C------C-TCCAA-------A
i Semnopithecus_entellus.k141_1527475                   C 0 T 744
s Semnopithecus_hypoleucos.k141_761524                       6579 18 +     20762 GA----A----GA-------G--ATAT--C------C-TCCAA-------A
i Semnopithecus_hypoleucos.k141_761524                  C 0 T 744
s Semnopithecus_johnii.k141_1351450                         40314 18 +     40653 GA----A----GA-------G--ATAT--C------C-TCCAA-------A
i Semnopithecus_johnii.k141_1351450                     C 0 T 744
s Semnopithecus_priam.k141_198153                           10871 18 -     12194 GA----A----GA-------G--ATAT--C------C-TCCAA-------A
i Semnopithecus_priam.k141_198153                       C 0 T 744
s Semnopithecus_schistaceus.k141_653647                     24293 18 -     27512 GA----A----GA-------G--ATAT--C------C-TCCAA-------A
i Semnopithecus_schistaceus.k141_653647                 C 0 T 744
s Semnopithecus_vetulus.k141_642050                         33308 18 -     33692 GA----A----GA-------G--ATAT--C------C-TCCAA-------A
i Semnopithecus_vetulus.k141_642050                     C 0 T 740
s Sigmodon_hispidus.SigHis_scaffold_11332                   98153 13 -    120886 aa----a----a--------c--atat--t------t-tc-----------
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 T 694
s Spermophilus_dauricus.KZ294190.1                        2238415 14 +   2842873 AA----A----GG-------C--AGAT--C------C-TC-----------
i Spermophilus_dauricus.KZ294190.1                      C 0 T 720
s Symphalangus_syndactylus.tarseq_24                        13246 18 -  13920577 aa----a----ga-------g--aaac--c------c-cccaa-------a
i Symphalangus_syndactylus.tarseq_24                    C 0 I 19
s Tarsius_lariang.k141_609102                               24958 18 +     42269 aa----a----gg-------t--aaat--c------t-tccaa-------a
i Tarsius_lariang.k141_609102                           C 0 T 721
s Tarsius_wallacei.k141_48636                               58274 18 +     65473 aa----a----gg-------t--aaat--c------t-tccaa-------a
i Tarsius_wallacei.k141_48636                           C 0 T 721
s Theropithecus_gelada.CM009951.1                       194005611  6 - 194193292 AA----A----ga-------g------------------------------
i Theropithecus_gelada.CM009951.1                       C 0 T 734
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             37779 14 -     47444 ga----a----ga-------c--acat--t------t-aa-----------
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 T 690
s Trachypithecus_auratus.k141_738098                        24689 18 +     38948 GA----A----GA-------G--ATAT--C------C-TCCAA-------A
i Trachypithecus_auratus.k141_738098                    C 0 T 744
s Trachypithecus_crepusculus.k141_1588528                   18416 18 -     32910 GA----A----GA-------G--ATAT--C------C-TCCAA-------A
i Trachypithecus_crepusculus.k141_1588528               C 0 T 744
s Trachypithecus_cristatus.k141_27198                       24314 18 +     24652 GA----A----GA-------G--ATAT--C------C-TCCAA-------A
i Trachypithecus_cristatus.k141_27198                   C 0 T 744
s Trachypithecus_francoisi.k141_1178450                      3192 18 -      3559 GA----A----GA-------G--ATAT--C------C-TCCAA-------A
i Trachypithecus_francoisi.k141_1178450                 C 0 T 744
s Trachypithecus_geei.k141_670367                           41136 18 -     54611 GA----A----GA-------G--ATAT--C------C-TCCAA-------A
i Trachypithecus_geei.k141_670367                       C 0 T 742
s Trachypithecus_germaini.k141_809503                       17137 18 +     17312 GA----A----GA-------G--ATAT--C------C-TCCAA-------A
i Trachypithecus_germaini.k141_809503                   C 0 T 725
s Trachypithecus_hatinhensis.k141_357672                    24500 18 -     25040 GA----A----GA-------G--ATAT--C------C-TCCAA-------A
i Trachypithecus_hatinhensis.k141_357672                C 0 T 744
s Trachypithecus_laotum.k141_171445                          3161 18 +      3528 GA----A----GA-------G--ATAT--C------C-TCCAA-------A
i Trachypithecus_laotum.k141_171445                     C 0 T 744
s Trachypithecus_leucocephalus.k141_283605                  49528 18 +     51589 GA----A----GA-------G--ATAT--C------C-TCCAA-------A
i Trachypithecus_leucocephalus.k141_283605              C 0 T 744
s Trachypithecus_melamera.k141_238507                       12704 18 +     14732 GA----A----GA-------G--ATAT--C------C-TCCAA-------A
i Trachypithecus_melamera.k141_238507                   C 0 T 744
s Trachypithecus_obscurus.k141_1115109                       3181 18 -     28054 GA----A----GA-------G--ATAT--C------C-TCCAA-------A
i Trachypithecus_obscurus.k141_1115109                  C 0 T 744
s Trachypithecus_phayrei.ctg3                            44657976 18 -  44834318 GA----A----GA-------G--ATAT--C------C-TCCAA-------A
i Trachypithecus_phayrei.ctg3                           C 0 T 744
s Trachypithecus_pileatus.k141_469329                        2985 18 +      3372 GA----A----GA-------G--ATAT--C------C-TCCAA-------A
i Trachypithecus_pileatus.k141_469329                   C 0 T 743
s Tupaia_chinensis.KB320831.1                             2791135 18 -   3938065 ga----a----ga-------c--aggT--C------CCCCC-A-------G
i Tupaia_chinensis.KB320831.1                           C 0 T 1228
s Tupaia_tana.TupTan_flattened_line_68454                    3396 17 +     13056 ga----a----ga-------c--aggt--c------c-ccc-a-------g
i Tupaia_tana.TupTan_flattened_line_68454               C 0 T 968
s Varecia_rubra.k141_432109                                  3742 18 -     20643 aa----a----ga-------c--agat--c------c-tccag-------a
i Varecia_rubra.k141_432109                             C 0 T 738
s Varecia_variegata.k141_775891                             23284 18 -     33872 aa----a----ga-------c--agat--c------c-tccag-------a
i Varecia_variegata.k141_775891                         C 0 T 736
s Xerus_inauris.XerIna_scaffold_7898                       125516 14 -    134049 aa----a----ga-------c--agat--c------c-cc-----------
i Xerus_inauris.XerIna_scaffold_7898                    C 0 T 723
s Zapus_hudsonius.ZapHud_scaffold_64392                     13744 14 -     20485 ta----a----gg-------g--agag--c------t-ca-----------
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 T 712
e Eptesicus_fuscus.JH977687.1                             4702558 570 +   6522550 T
e Macroglossus_sobrinus.MacSob_scaffold_879                700405 588 +    802869 T
e Sorex_araneus.JH798170.1                               17749433 999 -  27805282 T
e Erinaceus_europaeus.JH835290.1                         11531295 619 +  16010500 T
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           1627  0 -      6963 C
e Suricata_suricatta.SurSur_flattened_line_20339            25749 587 +     62062 T
e Chrysochloris_asiatica.ChrAsi_scaffold_141308              8820 2035 -     12508 T
e Ziphius_cavirostris.ZipCav_flattened_line_127025           5743 596 -      8775 T
e Zalophus_californianus.ZalCal_flattened_line_4097        212466 605 -    227762 T
e Vulpes_lagopus.VulLag_flattened_line_2045                135938 606 -    281493 T
e Vicugna_pacos.KN269600.1                                1523470 590 -   2331223 T
e Ursus_maritimus.KK498671.1                              6513003 615 +  28682327 T
e Uropsilus_gracilis.UroGra_scaffold_139357                   696  0 +      2103 C
e Tursiops_truncatus.MRVK01000923.1                      69312246 595 -  96451834 T
e Trichechus_manatus.JH594618.1                          16081379 1856 +  31416278 T
e Tragulus_javanicus.TraJav_scaffold_14717                   4003 576 +     90398 T
e Tonatia_saurophila.TonSau_scaffold_3334                  134662 575 -    259118 T
e Tolypeutes_matacus.TolMat_scaffold_269431                  4396 2563 +      6782 T
e Tapirus_terrestris.TapTer_scaffold_14939                  56190 591 +     99546 T
e Tapirus_indicus.TapInd_scaffold_176                      805530 592 +   1148477 T
e Tamandua_tetradactyla.TamTet_scaffold_26877               13539 590 +     45698 T
e Tadarida_brasiliensis.TadBra_scaffold_145589               4581 564 -      6213 T
e Sus_scrofa.CM000824.4                                 189270675 604 + 218635234 T
e Spilogale_gracilis.SpiGra_flattened_line_905             233196 596 -    276980 T
e Solenodon_paradoxus.SolPar_flattened_line_1012            16792 573 +    739146 T
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   30171 591 -    114521 T
e Saiga_tatarica.SaiTat_scaffold_82192                       6411 583 +     12214 T
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                18082 592 +    109198 T
e Rhinolophus_sinicus.LVEH01000179.1                      1786602 584 +   2252614 T
e Rangifer_tarandus.RanTarSib_scaffold_24239                14609 588 +     68503 T
e Puma_concolor.QAVW01000427.1                          131532510 588 - 161321710 T
e Pteropus_vampyrus.KN525959.1                             602742 594 -   3946241 T
e Pteropus_alecto.KB031157.1                             13244792 595 -  17261082 T
e Pteronura_brasiliensis.PteBra_flattened_line_1343        244445 611 -    344369 T
e Pteronotus_parnellii.KE867983.1                            2652 575 -     27784 T
e Procavia_capensis.ProCapCap_scaffold_15315                76241 2096 +     78963 T
e Platanista_gangetica.PlaMin_flattened_line_72990           4214 597 +     21690 T
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            95634 565 +    112873 T
e Phocoena_phocoena.PhoPho_flattened_line_11948            120146 597 -    122454 T
e Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113863 604 -    135482 T
e Pantholops_hodgsonii.KE114631.1                         1064955 574 -   1292953 T
e Panthera_tigris.KE721879.1                              5025928 588 -   6340057 T
e Panthera_pardus.KV860323.1                              3636281 589 +  18214204 T
e Panthera_onca.PanOnc_flattened_line_1615                  32547 588 +    295523 T
e Ovis_canadensis.OviCan_scaffold_6251                      77308 574 +    140051 T
e Ovis_aries.CM001582.2                                 134076094 574 - 275406953 T
e Otocyon_megalotis.JAEUCK010005121.1                      305865 601 -    505867 T
e Orycteropus_afer.OryAfe_flattened_line_13509              43235 1921 -     66828 T
e Orcinus_orca.KB316965.1                                 7223529 597 -   7562323 T
e Okapia_johnstoni.LVCL01S0017931.1                         35827 729 +     78940 T
e Odocoileus_virginianus.KZ101650.1                       1078532 589 +   1425656 T
e Odobenus_rosmarus.KB229369.1                             677731 600 -   3126709 T
e Nyctereutes_procyonoides.CAJHUB010000786.1                28531 606 +   3668941 T
e Noctilio_leporinus.NocLep_scaffold_12062                  48091 568 +     94413 T
e Neophocaena_asiaeorientalis.KZ688543.1                  3949845 597 -   4490290 T
e Neomonachus_schauinslandi.NINY01007774.1                4483086 611 -  14209539 T
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3864 589 -      8794 T
e Myotis_myotis.MyoMyo_scaffold_6123                         8970 569 +     66751 T
e Myotis_lucifugus.GL429887.1                             3463776 570 -   3747815 T
e Myotis_davidii.KB114863.1                               5017879 569 +   6462685 T
e Myotis_brandtii.KE161952.1                               966190 571 +   8389877 T
e Mustela_putorius.JH417978.1                             4422351 610 -  28371801 T
e Murina_feae.MurFea_scaffold_2254                          17865 566 -    100666 T
e Mungos_mungo.MunMun_flattened_line_8729                  143083 585 -    168139 T
e Moschus_moschiferus.MosMos_scaffold_146101                 3404 589 -      4346 T
e Mormoops_blainvillei.MorMeg_scaffold_2952                159984 578 +    265003 T
e Monodon_monoceros.MonMon_M_scaffold_5598                 145232 596 +    154973 T
e Mirounga_angustirostris.MirAng_flattened_line_8852         9694 818 -    104932 T
e Miniopterus_schreibersii.MinSch_scaffold_24116            32901 573 +     45743 T
e Miniopterus_natalensis.LDJU01000022.1                   8208229 572 +  10048721 T
e Micronycteris_hirsuta.MicHir_scaffold_37978               21478 582 -     32043 T
e Microgale_talazaci.MicTal_scaffold_34660                  30484 1282 -     48017 T
e Mesoplodon_bidens.MesBid_scaffold_183284                   2166 255 +      2166 T
e Mellivora_capensis.MelCap_flattened_line_146202             779 605 -      1999 T
e Megaderma_lyra.MegLyr_scaffold_3562                       63204 732 -    234502 T
e Manis_pentadactyla.KN017078.1                             34979 596 +     58827 T
e Manis_javanica.JSZB01003966.1                            144904 595 +    252755 T
e Lycaon_pictus.CM007556.1                               11085538 606 +  39895028 T
e Loxodonta_africana.GL010040.1                          20590917 1859 -  62548349 T
e Lipotes_vexillifer.KE558548.1                            134797 598 +   3060487 T
e Leptonychotes_weddellii.KB714749.1                      3084186 615 -   3498232 T
e Lasiurus_borealis.LasBor_scaffold_5102                   112354 573 -    115756 T
e Kogia_breviceps.KogBre_flattened_line_35920               22464 592 +     37189 T
e Inia_geoffrensis.IniGeo_flattened_line_66725               7632 591 +     17520 T
e Hyaena_hyaena.HyaHya_flattened_line_20729                 14487 630 -     67322 T
e Hipposideros_galeritus.HipGal_scaffold_104691              6355 566 -      9143 T
e Hipposideros_armiger.JXIK01001085.1                      277196 565 -    477199 T
e Hippopotamus_amphibius.HipAmp_scaffold_1308              145879 587 +    277961 T
e Heterohyrax_brucei.HetBruBak_scaffold_25354               56377 2096 +     73687 T
e Hemitragus_hylocrius.HemHyl_scaffold_16669                26300 573 -     91191 T
e Helogale_parvula.HelPar_flattened_line_22962              15392 589 +     53719 T
e Giraffa_tippelskirchi.LVKQ01S012154.1                    180102 874 -    189561 T
e Felis_nigripes.FelNig_flattened_line_8080                 19352 584 +     52776 T
e Felis_catus_fca126.CM031420.1                         129278217 584 - 158578461 T
e Eubalaena_japonica.EubJap_flattened_line_7756             60304 620 +     89355 T
e Eschrichtius_robustus.EscRob_flattened_line_685          313850 596 +    330699 T
e Equus_przewalskii.ATBW01073585.1                          11740 861 +     92910 T
e Equus_caballus.CM000402.2                              13350250 861 +  41866177 T
e Equus_asinus.JREZ01000062.1                             5851747 860 -   7175178 T
e Enhydra_lutris.KZ291749.1                              85869969 610 +  99434291 T
e Elephantulus_edwardii.JH947210.1                        7805914 1445 +  15467074 T
e Elaphurus_davidianus.JRFZ01086400.1                     1490302 589 +   1727528 T
e Eidolon_helvum.KE772537.1                                 10991 592 +     24177 T
e Echinops_telfairi.JH980316.1                           22994071  0 -  44670279 C
e Diceros_bicornis.DicBicMic_scaffold_9545                   1977 1182 +    151128 T
e Dicerorhinus_sumatrensis.PEKH010003161.1                 321325 1172 +    993696 T
e Desmodus_rotundus.KZ672188.1                           18697602 573 -  18957592 T
e Delphinapterus_leucas.KZ290064.1                       80035644 592 -  96802777 T
e Dasypus_novemcinctus.JH568778.1                          182464 2581 -   6883506 T
e Cryptoprocta_ferox.CryFer_flattened_line_19014            50184 590 -     70449 T
e Crocidura_indochinensis.CroInd_scaffold_38409             18475 566 -     19186 T
e Craseonycteris_thonglongyai.CraTho_scaffold_22679         38414 982 -     40477 T
e Condylura_cristata.JH655880.1                          60611428 454 +  78930452 T
e Choloepus_hoffmanni.KN194586.1                           760580 596 +    964067 T
e Choloepus_didactylus.ChoDid_scaffold_36182                15269 596 -     21363 T
e Ceratotherium_simum_cottoni.CerCot_scaffold_160623         2430 1181 -      9338 T
e Catagonus_wagneri.CatWag_scaffold_1305                   157578 564 -    276539 T
e Carollia_perspicillata.CarPer_scaffold_4436               58293 574 +     67245 T
e Capra_hircus.CM004562.1                               135705256 574 - 157403528 T
e Capra_aegagrus.CM003214.1                              21324029 574 + 157394656 T
e Canis_lupus_orion.HG994411.1                           16453106 606 -  44759192 T
e Canis_lupus_familiaris.chr31                           11086082 606 +  39895921 T
e Canis_lupus_dingo.QKWQ01001993.1                       11263553 606 -  35597290 T
e Canis_lupus_VD.CanFam_VD_scaffold_16982                   11910 606 +     87036 T
e CanFam4.chr31                                          11516892 606 +  39901454 T
e Camelus_ferus.KB016973.1                                2971801 593 +   6889770 T
e Camelus_dromedarius.KN271192.1                           396068 594 -  15254737 T
e Camelus_bactrianus.KN276303.1                           3218363 593 -   8989139 T
e Bubalus_bubalis.KI419065.1                              1229773 588 -   1914593 T
e Bos_taurus.CM000177.6                                 136294018 589 - 158972876 T
e Bos_mutus.JH883513.1                                     570659 589 -    998990 T
e Bos_indicus.CM003021.1                                138138285 589 - 161108492 T
e Bison_bison.KN264915.1                                  6558046 589 +   6870073 T
e Beatragus_hunteri.BeaHun_scaffold_21644                   42015 569 -     72089 T
e Balaenoptera_bonaerensis.DF502048.1                        4197 598 -     13118 T
e Balaenoptera_acutorostrata.KI537095.1                  26378965 597 +  51448160 T
e Artibeus_jamaicensis.ArtJam_scaffold_41619                 7496 576 -     29036 T
e Antilocapra_americana.AntAmePen_scaffold_42841            29534 583 +     33004 T
e Anoura_caudifer.AnoCau_scaffold_422                      389095 570 -    631301 T
e Ammotragus_lervia.NIVO01013474.1                        3518953 602 +   4113121 T
e Ailurus_fulgens.LNAC01000003.1                          7092441 814 -  16596857 T
e Ailuropoda_melanoleuca.LNAT01000321.1                  10655516 614 +  23371972 T
e Acinonyx_jubatus.LLWD01000356.1                         2032169 587 +   3721120 T
e Hylobates_pileatus_a.tarseq_592                             31779 1016 -     60944 T
e Hylobates_pileatus_b.ContigUN                                 14623128 857 -  25970782 T
e Hylobates_muelleri.k141_1389047                             384 264 -      2977 I
e Hylobates_klossii.k141_466549                             10023 853 +     11537 T
e Hylobates_agilis.k141_624065                                447 264 +      2112 I
e Hylobates_abbotti.k141_493872                              3583 857 +      5897 T
e Piliocolobus_kirkii.k141_557609                           19957 700 +     19957 T
e Macaca_tonkeana.k141_2870633                               2864 158 -     27140 T
e Macaca_nigra.k141_282495                                   2859 158 -     46448 T
e Macaca_maura.k141_251854                                  43912 158 -     79256 T

a score=0.000000
s hg38.chr4_GL000008v2_random                               10251 19 +    209709 aggaa------ttt-tc-aata-ccaga
s Acinonyx_jubatus.LLWD01000356.1                         2031582 19 +   3721120 AGGCA------TTT-TC-AATA-CCAGA
i Acinonyx_jubatus.LLWD01000356.1                       T 587 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    110165 19 -    189883 AGGCA------TTT-TC-AATA-GCAGA
i Acomys_cahirinus.AcoCah_scaffold_1625                 T 822 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10654902 19 +  23371972 AGGCA------TTT-TC-AATA-CCAGA
i Ailuropoda_melanoleuca.LNAT01000321.1                 T 614 C 0
s Ailurus_fulgens.LNAC01000003.1                          7091627 19 -  16596857 AGGCA------TTT-TC-AATA-CCAGA
i Ailurus_fulgens.LNAC01000003.1                        T 814 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   10596 19 -     22067 AGGCA------TTT-TC-AATA-GCAGA
i Allactaga_bullata.AllBul_scaffold_70162               T 833 C 0
s Allenopithecus_nigroviridis.k141_3103707                  60523 19 +     61638 AGGCA------CTT-TC-AATA-CCAGA
i Allenopithecus_nigroviridis.k141_3103707              T 742 C 0
s Allochrocebus_lhoesti.k141_4825038                        52331 19 +     53391 AGGCA------CTT-TC-AATA-CCAGA
i Allochrocebus_lhoesti.k141_4825038                    T 746 C 0
s Allochrocebus_preussi.k141_1202907                         3056 19 +     72529 AGGCA------CTT-TC-AATA-CCAGA
i Allochrocebus_preussi.k141_1202907                    T 746 C 0
s Allochrocebus_solatus.k141_787528                          2631 19 +      3797 AGGCA------CTT-TC-AATA-CCAGA
i Allochrocebus_solatus.k141_787528                     T 746 C 0
s Alouatta_belzebul.k141_1818029                             7804 19 -     18050 AGGCA------TTT-TC-AATA-CCAGA
i Alouatta_belzebul.k141_1818029                        T 715 C 0
s Alouatta_caraya.k141_5460                                  8917 19 -     11521 AGGCA------TTT-TC-AATA-CCAGA
i Alouatta_caraya.k141_5460                             T 715 C 0
s Alouatta_discolor.k141_811576                              8481 19 -     21359 AGGCA------TTT-TC-AATA-CCAGA
i Alouatta_discolor.k141_811576                         T 715 C 0
s Alouatta_juara.k141_298055                                  487 19 +      1823 AGGAA------CTT-TC-AATA-CCACA
i Alouatta_juara.k141_298055                            C 0 I 43
s Alouatta_macconnelli.k141_1331706                          7772 19 -     10438 AGGCA------TTT-TC-AATA-CCAGA
i Alouatta_macconnelli.k141_1331706                     T 715 C 0
s Alouatta_nigerrima.k141_2718643                            4428 19 +      7047 AGGCA------TTT-TC-AATA-CCAGA
i Alouatta_nigerrima.k141_2718643                       T 715 C 0
s Alouatta_palliata.k141_1316127                             7714 19 +     10410 AGGCA------TTT-TC-AATA-CCAGA
i Alouatta_palliata.k141_1316127                        T 714 C 0
s Alouatta_puruensis.k141_1284840                            1517 19 -      4927 AGGCA------TTT-TC-AATA-CCAGA
i Alouatta_puruensis.k141_1284840                       T 715 C 0
s Alouatta_seniculus.k141_990213                             4447 19 +      6429 AGGCA------TTT-TC-AATA-CTAGA
i Alouatta_seniculus.k141_990213                        T 715 C 0
s Ammotragus_lervia.NIVO01013474.1                        3518351 19 +   4113121 AGGCA------TTT-TC-AATA-GGAGA
i Ammotragus_lervia.NIVO01013474.1                      T 602 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      388525 19 -    631301 AGGCA------TTT-TC-AATA-CCAGA
i Anoura_caudifer.AnoCau_scaffold_422                   T 570 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            28951 19 +     33004 AGGCA------TTT-TC-AATA-GAAGA
i Antilocapra_americana.AntAmePen_scaffold_42841        T 583 C 0
s Aotus_azarae.k141_3170768                                 60167 19 +     78111 AGGCA------TTT-TC-AATA-CCAGA
i Aotus_azarae.k141_3170768                             T 718 C 0
s Aotus_griseimembra.k141_3275623                            3105 19 +     22701 AGGCA------TTT-TC-AATA-CCAGA
i Aotus_griseimembra.k141_3275623                       T 721 C 0
s Aotus_nancymaae.KZ196176.1                              5747063 19 +   9889416 AGGCA------TTT-TC-AATA-CCAGA
i Aotus_nancymaae.KZ196176.1                            T 720 C 0
s Aotus_trivirgatus.k141_1740727                             3648 19 -    104377 AGGCA------TTT-TC-AATA-CCAGA
i Aotus_trivirgatus.k141_1740727                        T 720 C 0
s Aotus_vociferans.k141_718647                               3654 19 +     23246 AGGCA------TTT-TC-AATA-CCAGA
i Aotus_vociferans.k141_718647                          T 720 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     1670 19 +      5067 AGGCA------CTT-TC-AATA-CCACA
i Aplodontia_rufa.AprRuf_scaffold_156013                T 706 C 0
s Arctocebus_calabarensis.k141_1161114                      15617 19 +     17483 AGGCA------CTT-GC-AATA-CCAGA
i Arctocebus_calabarensis.k141_1161114                  T 703 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 6920 19 -     29036 AGGCA------TTT-TC-AATA-CCAGA
i Artibeus_jamaicensis.ArtJam_scaffold_41619            T 576 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9536916 19 +  39197703 AGGCA------TTT-TC-AATA-CCAGA
i Ateles_geoffroyi_b.tarseq_2582                           T 702 C 0
s Ateles_belzebuth.k141_1348307                             58200 19 +     85812 AGGCA------TTT-TC-AATA-CCAGA
i Ateles_belzebuth.k141_1348307                         T 702 C 0
s Ateles_chamek.k141_1072810                                 9199 19 +     89302 AGGCA------TTT-TC-AATA-CCAGA
i Ateles_chamek.k141_1072810                            T 702 C 0
s Ateles_geoffroyi_a.k141_1300742                             13704 19 -     58268 AGGCA------TTT-TC-AATA-CCAGA
i Ateles_geoffroyi_a.k141_1300742                         T 702 C 0
s Ateles_marginatus.k141_899112                             61695 19 +    119057 AGGCA------TTT-TC-AATA-CCAGA
i Ateles_marginatus.k141_899112                         T 702 C 0
s Ateles_paniscus.k141_1631200                               3646 19 -     25888 AGGCA------TTT-TC-AATA-CCAGA
i Ateles_paniscus.k141_1631200                          T 720 C 0
s Avahi_laniger.k141_2840928                                 4398 19 -     16375 AGGCA------CTT-TC-AATA-CCAGA
i Avahi_laniger.k141_2840928                            T 744 C 0
s Avahi_peyrierasi.k141_2689020                               718 19 +      2719 AGGCA------CTT-TC-AATA-CCAGA
i Avahi_peyrierasi.k141_2689020                         T 743 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26378368 19 +  51448160 AGGTA------TTT-TC-AATA-CGAGA
i Balaenoptera_acutorostrata.KI537095.1                 T 597 C 0
s Balaenoptera_bonaerensis.DF502048.1                        3599 19 -     13118 AGGTA------TTT-TC-AATA-CGAGA
i Balaenoptera_bonaerensis.DF502048.1                   T 598 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   41446 19 -     72089 AGGCA------TTT-TC-AATA-GGAGA
i Beatragus_hunteri.BeaHun_scaffold_21644               T 569 C 0
s Bison_bison.KN264915.1                                  6557457 19 +   6870073 AGGCA------TTT-TC-AATA-GGAGA
i Bison_bison.KN264915.1                                T 589 C 0
s Bos_indicus.CM003021.1                                138137696 19 - 161108492 AGGCA------TTT-TC-AATA-GGAGA
i Bos_indicus.CM003021.1                                T 589 C 0
s Bos_mutus.JH883513.1                                     570070 19 -    998990 AGGCA------TTT-TC-AATA-GGAGA
i Bos_mutus.JH883513.1                                  T 589 C 0
s Bos_taurus.CM000177.6                                 136293429 19 - 158972876 AGGCA------TTT-TC-AATA-GGAGA
i Bos_taurus.CM000177.6                                 T 589 C 0
s Bubalus_bubalis.KI419065.1                              1229185 19 -   1914593 AGGCA------TTT-TC-AATA-GGAGA
i Bubalus_bubalis.KI419065.1                            T 588 C 0
s Cacajao_ayresi.k141_724503                               111540 19 -    171031 AGGCA------TTT-TC-AATA-CCAGA
i Cacajao_ayresi.k141_724503                            T 720 C 0
s Cacajao_calvus.k141_96166                                 10566 19 +    125063 AGGCA------TTT-TC-AATA-CCAGA
i Cacajao_calvus.k141_96166                             T 720 C 0
s Cacajao_hosomi.k141_303789                                12614 19 -    216513 AGGCA------TTT-TC-AATA-CCAGA
i Cacajao_hosomi.k141_303789                            T 720 C 0
s Cacajao_melanocephalus.k141_1160263                        5154 19 -    134917 AGGCA------TTT-TC-AATA-CCAGA
i Cacajao_melanocephalus.k141_1160263                   T 720 C 0
s Camelus_bactrianus.KN276303.1                           3217770 19 -   8989139 AGGCA------TTT-TC-AATA-CCAGA
i Camelus_bactrianus.KN276303.1                         T 593 C 0
s Camelus_dromedarius.KN271192.1                           395474 19 -  15254737 AGGCA------TTT-TC-AATA-CCAGA
i Camelus_dromedarius.KN271192.1                        T 594 C 0
s Camelus_ferus.KB016973.1                                2971208 19 +   6889770 AGGCA------TTT-TC-AATA-CCAGA
i Camelus_ferus.KB016973.1                              T 593 C 0
s CanFam4.chr31                                          11516286 19 +  39901454 AGGCA------TTT-TC-AATA-CCAGA
i CanFam4.chr31                                         T 606 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   11304 19 +     87036 AGGCA------TTT-TC-AATA-CCAGA
i Canis_lupus_VD.CanFam_VD_scaffold_16982               T 606 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11262947 19 -  35597290 AGGCA------TTT-TC-AATA-CCAGA
i Canis_lupus_dingo.QKWQ01001993.1                      T 606 C 0
s Canis_lupus_familiaris.chr31                           11085476 19 +  39895921 AGGCA------TTT-TC-AATA-CCAGA
i Canis_lupus_familiaris.chr31                          T 606 C 0
s Canis_lupus_orion.HG994411.1                           16452500 19 -  44759192 AGGCA------TTT-TC-AATA-CCAGA
i Canis_lupus_orion.HG994411.1                          T 606 C 0
s Capra_aegagrus.CM003214.1                              21323455 19 + 157394656 AGGCA------TTT-TC-AATA-GGAGA
i Capra_aegagrus.CM003214.1                             T 574 C 0
s Capra_hircus.CM004562.1                               135704682 19 - 157403528 AGGCA------TTT-TC-AATA-GGAGA
i Capra_hircus.CM004562.1                               T 574 C 0
s Capromys_pilorides.CapPil_scaffold_1557951                  234 20 +       644 AGGCG------CTTTTC-AATA-CCAGA
i Capromys_pilorides.CapPil_scaffold_1557951            T 224 C 0
s Carlito_syrichta.NW_007248099.1                          306771 19 +    345090 AGGCA------CTT-TC-AATA-CCAGA
i Carlito_syrichta.NW_007248099.1                       T 721 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               57719 19 +     67245 AGGCA------TTT-TC-AATA-CCAGA
i Carollia_perspicillata.CarPer_scaffold_4436           T 574 C 0
s Castor_canadensis.CasCan_scaffold_47037                   28203 19 +     33760 AGGCA------CTT-TC-AATA-CCAGA
i Castor_canadensis.CasCan_scaffold_47037               T 739 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   157014 19 -    276539 AGGCA------TTT-TC-AATA-GCAGA
i Catagonus_wagneri.CatWag_scaffold_1305                T 564 C 0
s Cavia_aperea.AVPZ01000278.1                            15784375 20 -  24422027 NNNNN------NNNTTC-AATA-CCAGA
i Cavia_aperea.AVPZ01000278.1                           T 724 C 0
s Cavia_porcellus.DS562889.1                             15796307 20 -  24440124 AGGCA------CTTTTC-AATA-CCAGA
i Cavia_porcellus.DS562889.1                            T 726 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       174498 20 +    436027 AGGCA------CTTTTC-AATA-CCAGA
i Cavia_tschudii.CavTsc_scaffold_488                    T 726 C 0
s Cebus_albifrons.Contig22                               18888392 19 -  29618158 AGGCA------TTT-TC-AATA-CCAGA
i Cebus_albifrons.Contig22                              T 725 C 0
s Cebus_olivaceus.k141_93739                                 5936 19 -     26817 AGGCA------TTT-TC-AATA-CCAGA
i Cebus_olivaceus.k141_93739                            T 725 C 0
s Cebus_unicolor.k141_239009                                10179 19 +     25043 AGGCA------TTT-TC-AATA-CCAGA
i Cebus_unicolor.k141_239009                            T 722 C 0
s Cephalopachus_bancanus.k141_702587                         5808 19 +     21754 AGGCA------CTT-TC-AATA-CCAGA
i Cephalopachus_bancanus.k141_702587                    T 717 C 0
s Ceratotherium_simum.JH767818.1                          4361494 19 +   7569818 AGGCA------TTT-TC-AATA-CCAGA
i Ceratotherium_simum.JH767818.1                        T 1184 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         1249 19 -      9338 AGGCA------TTT-TC-AATA-CCAGA
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    T 1181 C 0
s Cercocebus_atys.KQ010443.1                              6552315 19 +   6739814 AGGCA------CTT-TC-AATA-CCAGA
i Cercocebus_atys.KQ010443.1                            T 734 C 0
s Cercocebus_chrysogaster.k141_2951608                      53792 19 -     54931 AGGCA------CTT-TC-AATA-CCAGA
i Cercocebus_chrysogaster.k141_2951608                  T 734 C 0
s Cercocebus_lunulatus.k141_3387186                         18776 19 -     19697 AGGCA------CTT-TC-AATA-CCAGA
i Cercocebus_lunulatus.k141_3387186                     T 734 I 105
s Cercocebus_torquatus.k141_3969582                         56307 19 -    107033 AGGCA------CTT-TC-AATA-CCAGA
i Cercocebus_torquatus.k141_3969582                     T 734 C 0
s Cercopithecus_ascanius.k141_4123525                         446 11 -     17608 ---------------TC-AATA-CCAGA
i Cercopithecus_ascanius.k141_4123525                   n 722 I 44
s Cercopithecus_cephus.k141_598190                          26685 19 +     30494 AGGCA------CTT-TC-AATA-CCAGA
i Cercopithecus_cephus.k141_598190                      T 739 C 0
s Cercopithecus_diana.k141_1490386                           2709 19 -      4022 AGGCA------CTT-TC-AATA-CCAGA
i Cercopithecus_diana.k141_1490386                      T 744 C 0
s Cercopithecus_hamlyni.k141_381099                          2602 19 -      3505 AGGCA------CTT-TC-AATA-CCAGA
i Cercopithecus_hamlyni.k141_381099                     T 740 I 43
s Cercopithecus_lowei.k141_623764                           21392 19 +     35983 AGGCA------CTT-TC-AATA-CCAGA
i Cercopithecus_lowei.k141_623764                       T 738 C 0
s Cercopithecus_albogularis.ctg51                              11987928 19 +  12117833 AGGCA------CTT-TC-AATA-CCAGA
i Cercopithecus_albogularis.ctg51                             T 739 C 0
s Cercopithecus_mona.ctg12                               46474681 19 +  46592721 AGGCA------CTT-TC-AATA-CCAGA
i Cercopithecus_mona.ctg12                              T 739 C 0
s Cercopithecus_neglectus.k141_1474992                      32508 19 +     33420 AGGCA------CTT-TC-AATA-CCAGA
i Cercopithecus_neglectus.k141_1474992                  T 741 C 0
s Cercopithecus_nictitans.k141_675209                        2544 19 -      3443 AGGCA------CTT-TC-AATA-CCAGA
i Cercopithecus_nictitans.k141_675209                   T 739 C 0
s Cercopithecus_petaurista.k141_2037881                      3535 19 -      4669 AGGCA------CTT-TC-AATA-CCAGA
i Cercopithecus_petaurista.k141_2037881                 T 746 C 0
s Cercopithecus_pogonias.k141_1977419                        3330 19 -      4411 AGGCA------CTT-TC-AATA-CCAGA
i Cercopithecus_pogonias.k141_1977419                   T 739 C 0
s Cercopithecus_roloway.k141_3372345                         2860 19 -      4205 AGGCA------CTT-TC-AATA-CCAGA
i Cercopithecus_roloway.k141_3372345                    T 744 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_1070855          1073 19 -      1715 AGGCA------CTT-TC-AATA-CTATA
i Chaetophractus_vellerosus.ChaVel_scaffold_1070855     T 413 C 0
s Cheirogaleus_major.k141_1157592                           56703 19 -     68416 AGGCA------CTT-TC-AATA-CCAGA
i Cheirogaleus_major.k141_1157592                       T 743 C 0
s Cheirogaleus_medius.k141_133808                            5745 19 +     13308 AGGCA------CTT-TC-AATA-CCAGA
i Cheirogaleus_medius.k141_133808                       T 743 C 0
s Cheracebus_lucifer.k141_619653                             3209 19 -     18223 AGGCA------TCT-TC-AATA-CCAGA
i Cheracebus_lucifer.k141_619653                        T 713 C 0
s Cheracebus_lugens.k141_203936                             20232 19 +     25473 AGGCA------TCT-TC-AATA-CCAGA
i Cheracebus_lugens.k141_203936                         T 713 C 0
s Cheracebus_regulus.k141_2128895                           39271 19 +     57117 AGGCA------TCT-TC-AATA-CCAGA
i Cheracebus_regulus.k141_2128895                       T 713 C 0
s Cheracebus_torquatus.k141_315545                          43946 19 +     54541 AGGCA------TCT-TC-AATA-CCAGA
i Cheracebus_torquatus.k141_315545                      T 713 C 0
s Chinchilla_lanigera.JH721867.1                         15959541 19 +  43084221 AGGCA------CTTTTC-AATA-CCAG-
i Chinchilla_lanigera.JH721867.1                        T 710 C 0
s Chiropotes_israelita.k141_1189915                         68762 19 +    196370 AGGCA------TTT-TC-AATA-CCAGA
i Chiropotes_israelita.k141_1189915                     T 707 C 0
s Chiropotes_sagulatus.k141_773804                          12942 19 +     40510 AGGCA------TTT-TC-AATA-CCAGA
i Chiropotes_sagulatus.k141_773804                      T 707 C 0
s Chlorocebus_aethiops.ctg22                             15136142 19 -  15256731 AGGCA------CTT-TC-AATA-CCAGA
i Chlorocebus_aethiops.ctg22                            T 746 C 0
s Chlorocebus_pygerythrus.k141_1486215                      31188 19 -     53260 AGGCA------CTT-TC-AGTA-CCAGA
i Chlorocebus_pygerythrus.k141_1486215                  T 746 C 0
s Chlorocebus_sabaeus.CM001963.2                        101141637 19 + 101219884 AGGCA------CTT-TC-AATA-CCAGA
i Chlorocebus_sabaeus.CM001963.2                        T 746 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                14673 19 -     21363 AGGCA------ATT-TC-AATA-CCAGA
i Choloepus_didactylus.ChoDid_scaffold_36182            T 596 C 0
s Choloepus_hoffmanni.KN194586.1                           759984 19 +    964067 AGGCA------ATT-TC-AATA-CCAGA
i Choloepus_hoffmanni.KN194586.1                        T 596 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_141308              6785 19 -     12508 AGGCA------CTT-TC-AGTA-CCAGA
i Chrysochloris_asiatica.ChrAsi_scaffold_141308         T 2035 C 0
s Colobus_angolensis.KN985967.1                          10880216 19 +  10971483 AGGCA------CTT-TC-AATA-CCAGA
i Colobus_angolensis.KN985967.1                         T 7453 C 0
s Colobus_guereza.LG08                                  147661374 19 + 156195979 AGGCA------CTT-TC-AATA-CCAGA
i Colobus_guereza.LG08                                  T 1048 C 0
s Colobus_polykomos.k141_1406057                            13361 19 +     23629 AGGCA------CTT-TC-AATA-CCAGA
i Colobus_polykomos.k141_1406057                        T 1049 C 0
s Condylura_cristata.JH655880.1                          60610974 19 +  78930452 AGGCA------TTT-TC-AATA-CCAGA
i Condylura_cristata.JH655880.1                         T 454 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         37432 19 -     40477 AGGCA------TTT-TC-AATA-CCAGA
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     T 982 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 275254 19 -    399297 AGGCA------TTT-TC-AATA-GCAGA
i Cricetomys_gambianus.CriGam_scaffold_949              T 1605 C 0
s Cricetulus_griseus.LT883672.1                          53026787 18 +  72327488 AGGCA------TTT-TC-AATA-GCA-A
i Cricetulus_griseus.LT883672.1                         T 718 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             17909 19 -     19186 AGGCA------TTT-TC-AATT-CCAGA
i Crocidura_indochinensis.CroInd_scaffold_38409         T 566 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            49594 19 -     70449 AGGCA------TTT-TC-AATA-CCAGA
i Cryptoprocta_ferox.CryFer_flattened_line_19014        T 590 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  205959 19 -    956709 AGGCA------CTT-TC-AATG-CTAGA
i Ctenodactylus_gundi.CteGun_scaffold_447               T 709 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 28318 20 -     67205 AGGCA------TTTTTC-AATA-CCGGA
i Ctenomys_sociabilis.CteSoc_scaffold_19489             T 896 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                15147 20 +     26546 AGGCG------CTTTTC-AATA-CCAGA
i Cuniculus_paca.CunPac_flattened_line_16637            T 1107 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             56630 20 -    236241 AGGCA------CTTTTC-AATA-CCAGA
i Dasyprocta_punctata.DasPun_flattened_line_634         T 726 C 0
s Dasypus_novemcinctus.JH568778.1                          179883 19 -   6883506 AGGCA------CTT-TC-AATA-CCATA
i Dasypus_novemcinctus.JH568778.1                       T 2581 C 0
s Daubentonia_madagascariensis.ctg11                     16842571 19 +  31942871 AGGCA------CTT-TC-AATA-CCAGA
i Daubentonia_madagascariensis.ctg11                    T 732 C 0
s Delphinapterus_leucas.KZ290064.1                       80035052 19 -  96802777 AGGTA------TTT-TC-AATA-TGAGA
i Delphinapterus_leucas.KZ290064.1                      T 592 C 0
s Desmodus_rotundus.KZ672188.1                           18697029 19 -  18957592 AGGCA------TTT-TC-AATA-CCAGA
i Desmodus_rotundus.KZ672188.1                          T 573 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 320153 19 +    993696 AGGCA------TTT-TC-AATA-CCAGA
i Dicerorhinus_sumatrensis.PEKH010003161.1              T 1172 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                    795 19 +    151128 AGGCA------TTT-TC-AATA-CCAGA
i Diceros_bicornis.DicBicMic_scaffold_9545              T 1182 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   155426 19 +    228994 AGGCA------CTTTTT-AATA-CCAG-
i Dinomys_branickii.DinBra_scaffold_1996                T 717 C 0
s Dipodomys_ordii.KN672545.1                              3653175 19 +   4240102 AGGCA------CTT-TC-AATA-CCAGA
i Dipodomys_ordii.KN672545.1                            T 894 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 24732 19 +     28912 AGGCA------CTT-TC-AATA-CCAGA
i Dipodomys_stephensi.DipSte_scaffold_44365             T 980 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                33891 20 -     73477 AGGCA------CTTTGC-AATA-CCAGA
i Dolichotis_patagonum.DolPat_scaffold_14102            T 713 C 0
s Eidolon_helvum.KE772537.1                                 10399 19 +     24177 AGGTG------TTT-TT-AATT-CCAGA
i Eidolon_helvum.KE772537.1                             T 592 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1489713 19 +   1727528 AGGCA------TTT-TC-AATA-GGAGA
i Elaphurus_davidianus.JRFZ01086400.1                   T 589 C 0
s Elephantulus_edwardii.JH947210.1                        7804469 14 +  15467074 --GCA------CTT-CC-AA----CAGG
i Elephantulus_edwardii.JH947210.1                      T 1445 C 0
s Ellobius_lutescens.LOEQ01003611.1                        237445 18 -    369425 AGGCA------TTT-TC-AATA-GAA-A
i Ellobius_lutescens.LOEQ01003611.1                     T 713 C 0
s Ellobius_talpinus.LOJH01090055.1                           4458 18 -      7838 AGGCA------TTT-TC-AATA-GAA-A
i Ellobius_talpinus.LOJH01090055.1                      T 716 C 0
s Enhydra_lutris.KZ291749.1                              85869359 19 +  99434291 AGGCA------TTT-TC-AATA-CCAGA
i Enhydra_lutris.KZ291749.1                             T 610 C 0
s Eptesicus_fuscus.JH977687.1                             4701988 19 +   6522550 AGGCA------TTT-TC-AATA-CGAGG
i Eptesicus_fuscus.JH977687.1                           T 570 C 0
s Equus_asinus.JREZ01000062.1                             5850887 19 -   7175178 AGGCA------TTT-TA-AATA-CCAGA
i Equus_asinus.JREZ01000062.1                           T 860 C 0
s Equus_caballus.CM000402.2                              13349389 19 +  41866177 AGGCA------TTT-TA-AATA-CCAGA
i Equus_caballus.CM000402.2                             T 861 C 0
s Equus_przewalskii.ATBW01073585.1                          10879 19 +     92910 AGGCA------TTT-TA-AATA-CCAGA
i Equus_przewalskii.ATBW01073585.1                      T 861 C 0
s Erinaceus_europaeus.JH835290.1                         11530676 19 +  16010500 AGGCA------CTT-TC-AATA-CCAGA
i Erinaceus_europaeus.JH835290.1                        T 619 C 0
s Erythrocebus_patas.Contig8                             48768320 19 -  48907691 AGGCA------CTT-TC-AATA-CCAGA
i Erythrocebus_patas.Contig8                            T 746 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          313254 19 +    330699 AGGTA------TTT-TC-AATA-CGAGA
i Eschrichtius_robustus.EscRob_flattened_line_685       T 596 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             59684 19 +     89355 AGGTA------TTT-TC-AATA-CGAGA
i Eubalaena_japonica.EubJap_flattened_line_7756         T 620 C 0
s Eulemur_albifrons.k141_715837                              2750 19 +     13586 AGGCA------CTT-TC-AATA-CCAGA
i Eulemur_albifrons.k141_715837                         T 738 C 0
s Eulemur_collaris.k141_311830                               2685 19 -      6809 AGGCA------CTT-TC-AATA-CCAGA
i Eulemur_collaris.k141_311830                          T 738 C 0
s Eulemur_coronatus.k141_3240342                             9161 19 +     36558 AGGCA------CTT-TC-AATA-CCAGA
i Eulemur_coronatus.k141_3240342                        T 737 C 0
s Eulemur_flavifrons.k141_903901                             5475 19 +     60246 AGGCA------CTT-TC-AATA-CCAGA
i Eulemur_flavifrons.k141_903901                        T 739 C 0
s Eulemur_fulvus.k141_653297                                 8958 19 +    109717 AGGCA------CTT-TC-AATA-CCAGA
i Eulemur_fulvus.k141_653297                            T 738 C 0
s Eulemur_macaco.k141_1341545                               13337 19 +     16540 AGGCA------CTT-TC-AATA-CCAGA
i Eulemur_macaco.k141_1341545                           T 739 C 0
s Eulemur_mongoz.k141_825972                                13613 19 +     27497 AGGCA------CTT-TC-AATA-CCAGA
i Eulemur_mongoz.k141_825972                            T 738 C 0
s Eulemur_rubriventer.k141_411740                           16079 19 +     26808 AGGCA------CTT-TC-AATA-CCAGA
i Eulemur_rubriventer.k141_411740                       T 729 C 0
s Eulemur_rufus.k141_1620292                                30803 19 +     46535 AGGCA------CTT-TC-AATA-CCAGA
i Eulemur_rufus.k141_1620292                            T 738 C 0
s Eulemur_sanfordi.k141_186399                              13526 19 -     29447 AGGCA------CTT-TC-AATA-CCAGA
i Eulemur_sanfordi.k141_186399                          T 738 C 0
s Felis_catus.CM001386.2                                129890558 19 - 159252932 AGGCA------TTT-TC-AATA-CCAGA
i Felis_catus.CM001386.2                                T 587 C 0
s Felis_catus_fca126.CM031420.1                         129277633 19 - 158578461 AGGCA------TTT-TC-AATA-CCAGA
i Felis_catus_fca126.CM031420.1                         T 584 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 18768 19 +     52776 AGGCA------TTT-TC-AATA-CCAGA
i Felis_nigripes.FelNig_flattened_line_8080             T 584 C 0
s Fukomys_damarensis.KN123630.1                          13890496 20 -  19261668 AGGCA------CTTTTC-AATA-CCAGA
i Fukomys_damarensis.KN123630.1                         T 707 C 0
s Galago_moholi.ctg555                                     208669 19 -    847004 AGGCA------CTT-TC-AATA-CCAGA
i Galago_moholi.ctg555                                  T 728 C 0
s Galago_senegalensis.k141_964197                           11050 19 -     43889 AGGCA------CTT-TC-AATA-CCAGA
i Galago_senegalensis.k141_964197                       T 726 C 0
s Galagoides_demidoff.k141_1769638                           8114 19 +     27357 AGGCA------CTT-TC-AATA-CCAGA
i Galagoides_demidoff.k141_1769638                      T 730 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               154028 19 +    324696 AGGCA------CTT-TC-AATA-CCAGA
i Galeopterus_variegatus.GalVar_scaffold_354            T 732 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    179228 19 -    189561 AGGCA------TTT-TC-AATA-GGAGA
i Giraffa_tippelskirchi.LVKQ01S012154.1                 T 874 C 0
s Glis_glis.GliGli_scaffold_79770                           10435 19 -     18683 AGGCA------CTT-TC-AATA-CCAGA
i Glis_glis.GliGli_scaffold_79770                       T 717 C 0
s Gorilla_beringei.k141_111300                               2908 19 -     14630 AGGCA------CTT-TC-AATA-CCAGA
i Gorilla_beringei.k141_111300                          T 742 C 0
s Gorilla_gorilla.LT578340.1                            119650007 19 - 195582420 AGGCA------CTT-TC-AATA-CCAGA
i Gorilla_gorilla.LT578340.1                            T 742 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   74964 19 +    118900 AGGCA------CTT-TC-AATA-CCAGA
i Graphiurus_murinus.GraMur_scaffold_4493               T 929 C 0
s Hapalemur_alaotrensis.k141_1198205                         3310 19 +      3980 AGGCA------CTT-TC-AATA-CCAGA
i Hapalemur_alaotrensis.k141_1198205                    T 591 C 0
s Hapalemur_gilberti.k141_97962                             25785 19 +     26611 AGGCA------CTT-TC-AATA-CCAGA
i Hapalemur_gilberti.k141_97962                         T 592 C 0
s Hapalemur_griseus.k141_1387522                             3247 19 +     56096 AGGCA------CTT-TC-AATA-CCAGA
i Hapalemur_griseus.k141_1387522                        T 845 C 0
s Hapalemur_meridionalis.k141_186231                        26522 19 -     42470 AGGCA------CTT-TC-AATA-CCAGA
i Hapalemur_meridionalis.k141_186231                    T 846 C 0
s Hapalemur_occidentalis.k141_797938                        43116 19 -     54384 AGGCA------CTT-TC-AATA-CCAGA
i Hapalemur_occidentalis.k141_797938                    T 850 C 0
s Helogale_parvula.HelPar_flattened_line_22962              14803 19 +     53719 AGGCA------TTT-TC-AATA-CCAGA
i Helogale_parvula.HelPar_flattened_line_22962          T 589 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                25727 19 -     91191 AGGCA------TTT-TC-AATA-GGAGA
i Hemitragus_hylocrius.HemHyl_scaffold_16669            T 573 C 0
s Heterocephalus_glaber.JH602058.1                        2548877 20 +  31725842 AGGTA------CTTTTC-AATA-CCAGA
i Heterocephalus_glaber.JH602058.1                      T 716 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               54281 19 +     73687 AGGCA------CTT-TC-AATA-CCCAA
i Heterohyrax_brucei.HetBruBak_scaffold_25354           T 2096 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              145292 19 +    277961 AGGCA------TTT-TC-AATA-CAAGA
i Hippopotamus_amphibius.HipAmp_scaffold_1308           T 587 C 0
s Hipposideros_armiger.JXIK01001085.1                      276631 19 -    477199 AGGCA------TTT-TC-AATA-CCAGA
i Hipposideros_armiger.JXIK01001085.1                   T 565 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              5789 19 -      9143 AGGCA------TTT-TC-AATA-CCAGA
i Hipposideros_galeritus.HipGal_scaffold_104691         T 566 C 0
s Hoolock_leuconedys.ctg903                                     4042 20 -     61166 AGGCA------CTT-TCTAATA-CCAGA
i Hoolock_leuconedys.ctg903                                T 726 I 859
s Hyaena_hyaena.HyaHya_flattened_line_20729                 13857 19 -     67322 AGGCA------TTT-TC-AATA-CCAGA
i Hyaena_hyaena.HyaHya_flattened_line_20729             T 630 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16792 20 -    119109 AGGCA------CTTTTC-AATA-CCAGA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       T 711 C 0
s Hylobates_abbotti.k141_493872                              2726 19 +      5897 AGGCA------CTT-TC-AATA-CCAGA
i Hylobates_abbotti.k141_493872                         T 857 C 0
s Hylobates_agilis.k141_1485652                              1146 19 -      1697 AGGCA------CTT-TC-AATA-CCAGA
i Hylobates_agilis.k141_1485652                         T 551 C 0
s Hylobates_klossii.k141_466549                              9170 19 +     11537 AGGCA------CTT-TC-AATA-CCAGA
i Hylobates_klossii.k141_466549                         T 853 C 0
s Hylobates_pileatus_b.ContigUN                                 14622271 19 -  25970782 AGGCA------CTT-TC-AATA-CCAGA
i Hylobates_pileatus_b.ContigUN                                T 857 C 0
s Hylobates_muelleri.k141_1133650                            2160 19 -      2775 AGGCA------CTT-TC-AATA-ACAGA
i Hylobates_muelleri.k141_1133650                       T 474 C 0
s Hylobates_pileatus_a.tarseq_592                             30763 19 -     60944 AGGCA------CTT-TC-AATA-CCAGA
i Hylobates_pileatus_a.tarseq_592                         T 1016 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     3927 20 +     22540 AGGCA------CTTTAC-AATA-CCAGA
i Hystrix_cristata.HysCri_scaffold_50788                T 718 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7123793 19 +  13083262 AGGCA------CTT-TC-AATA-CCAGA
i Ictidomys_tridecemlineatus.JH393315.1                 T 719 C 0
s Indri_indri.k141_1884019                                    986 19 -      2196 AGGCA------CTT-TC-AATA-CCAGA
i Indri_indri.k141_1884019                              T 749 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               7041 19 +     17520 AGGTA------TTT-TC-AATA-TGAGA
i Inia_geoffrensis.IniGeo_flattened_line_66725          T 591 C 0
s Jaculus_jaculus.JH725517.1                              8563336 19 +  11848649 AGGCA------TTT-TC-AATA-GCAGA
i Jaculus_jaculus.JH725517.1                            T 840 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               21872 19 +     37189 AGGTA------TTT-TC-AATA-TGAGA
i Kogia_breviceps.KogBre_flattened_line_35920           T 592 C 0
s Lagothrix_lagothricha.k141_12968                          47770 19 -    147782 AGGCA------TTT-TC-AATA-CCAGA
i Lagothrix_lagothricha.k141_12968                      T 717 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   111781 19 -    115756 AGGCA------TTT-TT-AATA-CGAGG
i Lasiurus_borealis.LasBor_scaffold_5102                T 573 C 0
s Lemur_catta.scaffold_1                                258404805 19 - 285822530 AGGCA------CTT-TC-AATA-CCAGA
i Lemur_catta.scaffold_1                                T 843 C 0
s Lepilemur_ankaranensis.k141_884009                        21677 19 +     39228 AGGCA------CTT-TC-AATA-CCAGA
i Lepilemur_ankaranensis.k141_884009                    T 741 C 0
s Lepilemur_dorsalis.k141_134267                            51050 19 +     63517 AGGCA------CTT-TC-AATA-CCAGA
i Lepilemur_dorsalis.k141_134267                        T 743 C 0
s Lepilemur_ruficaudatus.k141_617879                        76292 19 +    116806 AGGCA------CTT-TC-AATA-CCAGA
i Lepilemur_ruficaudatus.k141_617879                    T 745 C 0
s Lepilemur_septentrionalis.k141_578524                     29315 19 -     33031 AGGCA------CTT-TC-AATA-CCAGA
i Lepilemur_septentrionalis.k141_578524                 T 742 C 0
s Leptonychotes_weddellii.KB714749.1                      3083571 19 -   3498232 AGGCA------TTT-TC-AATA-CCAGA
i Leptonychotes_weddellii.KB714749.1                    T 615 C 0
s Lepus_americanus.LepAme_scaffold_62849                    10781 19 +     22452 AGGCA------CTT-TC-AATA-CCAGA
i Lepus_americanus.LepAme_scaffold_62849                T 715 C 0
s Lipotes_vexillifer.KE558548.1                            134199 19 +   3060487 AGGTA------TTT-TC-AATA-TGAGA
i Lipotes_vexillifer.KE558548.1                         T 598 C 0
s Lophocebus_aterrimus.ctg55                             19245403 19 +  19376315 AGGCA------CTT-TC-AATA-CCAGA
i Lophocebus_aterrimus.ctg55                            T 734 C 0
s Loris_lydekkerianus.k141_550999                            8417 19 +     84689 AGGCA------CTT-TC-AATA-CCAGA
i Loris_lydekkerianus.k141_550999                       T 730 C 0
s Loris_tardigradus.ctg97                                 3776168 19 +   6799190 AGGCA------CTT-TC-AATA-CCAGA
i Loris_tardigradus.ctg97                               T 730 C 0
s Loxodonta_africana.GL010040.1                          20589058 19 -  62548349 AGGCA------CTT-TC-AATG-CCAGA
i Loxodonta_africana.GL010040.1                         T 1859 C 0
s Lycaon_pictus.CM007556.1                               11084932 19 +  39895028 AGGCA------TTT-TC-AATA-CCAGA
i Lycaon_pictus.CM007556.1                              T 606 C 0
s Macaca_arctoides.k141_2201161                             17089 19 +     74745 AGGCA------CTT-TC-AATA-CCAGA
i Macaca_arctoides.k141_2201161                         T 727 C 0
s Macaca_assamensis.Contig65                             12703595 19 +  12821369 AGGCA------CTT-TC-AATA-CCAGA
i Macaca_assamensis.Contig65                            T 738 C 0
s Macaca_cyclopis.k119_893486                                 500 11 -      3136 ---------------TC-AATA-CCAGA
i Macaca_cyclopis.k119_893486                           n 614 C 0
s Macaca_fascicularis.k141_155037                           43993 19 +     63263 AGGCA------CTT-TC-AATA-CCAGA
i Macaca_fascicularis.k141_155037                       T 738 C 0
s Macaca_fuscata.k119_1068107                               12569 19 +     12679 AGGCA------CTT-TC-AATA-CCAGA
i Macaca_fuscata.k119_1068107                           T 1 C 0
s Macaca_leonina.k141_3421209                                2142 19 +      3017 AGGCA------CTT-TC-AATA-CCAGA
i Macaca_leonina.k141_3421209                           T 738 C 0
s Macaca_maura.k141_251854                                  43754 19 -     79256 AGGCA------CTT-TC-AATA-CCAGA
i Macaca_maura.k141_251854                              T 158 C 0
s Macaca_mulatta.NC_041755.1                            196032672 19 + 196197964 AGGCG------CTT-TC-AATA-CCAGA
i Macaca_mulatta.NC_041755.1                            T 738 C 0
s Macaca_nemestrina.KQ004885.1                           11442778 19 +  11645122 AGGCA------CTT-TC-AATA-CCAGA
i Macaca_nemestrina.KQ004885.1                          T 738 C 0
s Macaca_nigra.k141_282495                                   2701 19 -     46448 AGGCA------CTT-TC-AATA-CCAGA
i Macaca_nigra.k141_282495                              T 158 C 0
s Macaca_radiata.k141_1580474                                2532 19 -      3617 AGGCA------CTT-TC-AATA-CCAGA
i Macaca_radiata.k141_1580474                           T 740 C 0
s Macaca_siberu.k141_741907                                 12864 19 -     55006 AGGCA------CTT-TC-AATA-CCAGA
i Macaca_siberu.k141_741907                             T 738 C 0
s Macaca_silenus.Contig12                                43837901 19 +  43892939 AGGCA------CTT-TC-AATA-CCAGA
i Macaca_silenus.Contig12                               T 738 C 0
s Macaca_thibetana.k99_662710                               15410 11 -     24607 ---------------TC-AATA-CCAGA
i Macaca_thibetana.k99_662710                           n 719 I 44
s Macaca_tonkeana.k141_2870633                               2706 19 -     27140 AGGCA------CTT-TC-AATA-CCAGA
i Macaca_tonkeana.k141_2870633                          T 158 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                699817 19 +    802869 AGGTG------TTT-TT-AATT-CCAGA
i Macroglossus_sobrinus.MacSob_scaffold_879             T 588 C 0
s Mandrillus_leucophaeus.scaffold125                     43434563 19 -  43563597 AGGCA------CTT-TC-AATA-CCAGA
i Mandrillus_leucophaeus.scaffold125                    T 736 C 0
s Mandrillus_sphinx.Contig144                             4447389 19 -   4543643 AGGCA------CTT-TC-AATA-CCAGA
i Mandrillus_sphinx.Contig144                           T 736 C 0
s Manis_javanica.JSZB01003966.1                            144309 19 +    252755 AGGCA------TTT-TC-AATA-TCAGA
i Manis_javanica.JSZB01003966.1                         T 595 C 0
s Manis_pentadactyla.KN017078.1                             34383 19 +     58827 AGGCA------TTT-TC-AATA-CCAGA
i Manis_pentadactyla.KN017078.1                         T 596 C 0
s Marmota_marmota.CZRN01000005.1                         36871633 19 +  64221397 AGGCA------CTT-TC-AATA-CCAGA
i Marmota_marmota.CZRN01000005.1                        T 714 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       62472 19 -    234502 AGGCA------TTT-TC-AATA-CCACA
i Megaderma_lyra.MegLyr_scaffold_3562                   T 732 C 0
s Mellivora_capensis.MelCap_flattened_line_146202             174 19 -      1999 AGGCA------TTT-TC-AATG-CCAGA
i Mellivora_capensis.MelCap_flattened_line_146202       T 605 I 40
s Meriones_unguiculatus.MerUng_scaffold_52233                9743 19 +     15977 AGGCA------CTT-TC-AATA-GTAGA
i Meriones_unguiculatus.MerUng_scaffold_52233           T 698 C 0
s Mesocricetus_auratus.KB708139.1                         1044527 18 -  26018355 AGGCA------TTT-TC-AATA-ACA-A
i Mesocricetus_auratus.KB708139.1                       T 717 C 0
s Mesoplodon_bidens.MesBid_scaffold_183284                   1911 19 +      2166 AGGTA------TTT-TC-AATA-CGAGA
i Mesoplodon_bidens.MesBid_scaffold_183284              T 255 C 0
s Microcebus_murinus.CM007691.1                          16507925 19 +  47401472 AGGCA------CTT-TC-AATA-CCAGA
i Microcebus_murinus.CM007691.1                         T 738 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  29202 19 -     48017 AGGCA------TTT-TC-AATA-CCAGA
i Microgale_talazaci.MicTal_scaffold_34660              T 1282 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               20896 19 -     32043 AGGCA------TTT-TC-AATA-CCAAA
i Micronycteris_hirsuta.MicHir_scaffold_37978           T 582 C 0
s Microtus_ochrogaster.CM001673.1                        22817645 18 -  98408828 AGGCA------TTT-TC-AATA-GAA-A
i Microtus_ochrogaster.CM001673.1                       T 716 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8207657 19 +  10048721 AGGCA------TTT-TC-AGTA-CGAGA
i Miniopterus_natalensis.LDJU01000022.1                 T 572 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            32328 19 +     45743 AGGCA------TTT-TC-AGTA-CGAGA
i Miniopterus_schreibersii.MinSch_scaffold_24116        T 573 C 0
s Miopithecus_ogouensis.k141_2666161                        33222 19 +     34273 AGGCA------CTT-TC-AATA-CCAGA
i Miopithecus_ogouensis.k141_2666161                    T 744 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         8876 19 -    104932 AGGCA------TTT-TC-AATA-CCAGA
i Mirounga_angustirostris.MirAng_flattened_line_8852    T 818 C 0
s Mirza_zaza.k141_226143                                     3330 19 +      8497 AGGCA------CTT-TC-AATA-CCAGA
i Mirza_zaza.k141_226143                                T 731 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 144636 19 +    154973 AGGTA------TTT-TC-AATA-TGAGA
i Monodon_monoceros.MonMon_M_scaffold_5598              T 596 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                159406 19 +    265003 AGGCA------TTT-TC-AATA-CCAGA
i Mormoops_blainvillei.MorMeg_scaffold_2952             T 578 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 2815 19 -      4346 AGGCA------TTT-TC-AATA-GGAGA
i Moschus_moschiferus.MosMos_scaffold_146101            T 589 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  142498 19 -    168139 AGGCA------TTT-TC-AATA-CCAGA
i Mungos_mungo.MunMun_flattened_line_8729               T 585 C 0
s Murina_feae.MurFea_scaffold_2254                          17299 19 -    100666 AGGCA------TTT-TC-AATA-CAAGA
i Murina_feae.MurFea_scaffold_2254                      T 566 C 0
s Mus_caroli.LT608236.1                                  70764157 19 +  92629107 AGGCA------TTT-TC-AATA-GCAGA
i Mus_caroli.LT608236.1                                 T 696 C 0
s Mus_musculus.chr16                                     75487194 19 +  98207768 AGGCA------TTT-TC-AATA-GCAGA
i Mus_musculus.chr16                                    T 695 C 0
s Mus_pahari.LT608305.1                                  67553365 19 +  89017189 AGGCA------TTT-TC-AATA-GCAGA
i Mus_pahari.LT608305.1                                 T 712 C 0
s Mus_spretus.CM004110.1                                 74328375 19 +  97876770 AGGCA------TTT-TC-AATA-GCAGA
i Mus_spretus.CM004110.1                                T 694 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              8917 19 +     98495 AGGCA------CTT-TC-AATA-CCAGA
i Muscardinus_avellanarius.MusAve_scaffold_9643         T 714 C 0
s Mustela_putorius.JH417978.1                             4421741 19 -  28371801 AGGCA------TTT-TC-AATA-CCAGA
i Mustela_putorius.JH417978.1                           T 610 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     87869 20 -    117718 AGGCA------CTTTTC-AATA-CCAGA
i Myocastor_coypus.MyoCoy_scaffold_3653                 T 657 C 0
s Myotis_brandtii.KE161952.1                               965619 19 +   8389877 AGGCA------TTT-TC-AATA-CGAGG
i Myotis_brandtii.KE161952.1                            T 571 C 0
s Myotis_davidii.KB114863.1                               5017310 19 +   6462685 AGGCA------TTT-TC-AATA-CGAGG
i Myotis_davidii.KB114863.1                             T 569 C 0
s Myotis_lucifugus.GL429887.1                             3463206 19 -   3747815 AGGCA------TTT-TC-AATA-CGAGG
i Myotis_lucifugus.GL429887.1                           T 570 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         8401 19 +     66751 AGGCA------TTT-TC-AATA-CGAGG
i Myotis_myotis.MyoMyo_scaffold_6123                    T 569 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3275 19 -      8794 AGGCA------CTT-TC-AATA-CCAGA
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        T 589 C 0
s Nannospalax_galili.KL201303.1                            108253 19 +    362372 AGGCA------TTT-TC-AATA-GCAGG
i Nannospalax_galili.KL201303.1                         T 8425 C 0
s Nasalis_larvatus.k141_153429                               5601 19 +     48152 AGGCA------CTT-TC-AATA-CCAGA
i Nasalis_larvatus.k141_153429                          T 740 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4482475 19 -  14209539 AGGCA------TTT-TC-AATA-CCAGA
i Neomonachus_schauinslandi.NINY01007774.1              T 611 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3949248 19 -   4490290 AGGTA------TTT-TC-AATA-TGAGA
i Neophocaena_asiaeorientalis.KZ688543.1                T 597 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  47523 19 +     94413 AGGCA------TTT-TC-AATA-CCAGA
i Noctilio_leporinus.NocLep_scaffold_12062              T 568 C 0
s Nomascus_annamensis.k141_1439838                            473 19 +      3718 AGGCA------CTT-TC-AATA-CCAGA
i Nomascus_annamensis.k141_1439838                      T 736 I 780
s Nomascus_concolor.k141_49591                                696 19 +      2014 AGGCA------CTT-TC-AATA-CCAGA
i Nomascus_concolor.k141_49591                          T 736 I 736
s Nomascus_gabriellae.k141_906566                            2024 19 -      2544 AGGCA------CTT-TC-AATA-CCAGA
i Nomascus_gabriellae.k141_906566                       T 420 I 58
s Nomascus_siki_b.tarseq_80                             22500 19 -  18771707 AGGCA------CTT-TC-AATA-CCAGA
i Nomascus_siki_b.tarseq_80                         T 772 I 772
s Nomascus_siki_a.k141_844529                                  1775 19 +      2124 AGGCA------CTT-TC-AATA-CCAGA
i Nomascus_siki_a.k141_844529                             T 157 n 19
s Nyctereutes_procyonoides.CAJHUB010000786.1                27925 19 +   3668941 AGGCA------TTT-TC-AATA-CCAGA
i Nyctereutes_procyonoides.CAJHUB010000786.1            T 606 C 0
s Nycticebus_bengalensis.LG16                            65564763 19 -  95554990 AGGCA------CTT-TC-AATA-CCAGA
i Nycticebus_bengalensis.LG16                           T 837 C 0
s Nycticebus_coucang.k141_2051882                            1608 19 +      6470 AGGCA------CTT-TC-AATA-CCAGA
i Nycticebus_coucang.k141_2051882                       T 720 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65667133 19 +  89412551 AGGCA------CTT-TC-AATA-CCAGA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     T 815 C 0
s Ochotona_princeps.JH802095.1                            4993756 19 -  23139505 AGGCA------CTT-TC-AAAA-CCAGA
i Ochotona_princeps.JH802095.1                          T 731 C 0
s Octodon_degus.JH651621.1                                3683341 20 +  10294119 AGGCA------CTTTTC-AATA-CCAGA
i Octodon_degus.JH651621.1                              T 721 C 0
s Odobenus_rosmarus.KB229369.1                             677131 19 -   3126709 AGGCA------TTT-TC-AATA-CCAGA
i Odobenus_rosmarus.KB229369.1                          T 600 C 0
s Odocoileus_virginianus.KZ101650.1                       1077943 19 +   1425656 AGGCA------TTT-TC-AATA-GGAGA
i Odocoileus_virginianus.KZ101650.1                     T 589 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         35098 19 +     78940 AGGCA------TTT-TC-AATA-GGAGA
i Okapia_johnstoni.LVCL01S0017931.1                     T 729 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  122920 18 +    145789 AGGCA------TTT-TC-AATA-GAA-A
i Ondatra_zibethicus.OndZib_scaffold_6821               T 709 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  34675 18 +     62360 AGGCA------TTT-TC-AATA-GCA-A
i Onychomys_torridus.OnyTor_scaffold_12578              T 706 C 0
s Orcinus_orca.KB316965.1                                 7222932 19 -   7562323 AGGTA------TTT-TC-AATA-TGAGA
i Orcinus_orca.KB316965.1                               T 597 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              41314 19 -     66828 AGGCA------CTT-TC-AATA-CCAAA
i Orycteropus_afer.OryAfe_flattened_line_13509          T 1921 C 0
s Oryctolagus_cuniculus.CM000803.1                      141873439 19 + 163896628 AGGCA------CTT-TC-AATA-CCAGA
i Oryctolagus_cuniculus.CM000803.1                      T 691 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      305264 19 -    505867 AGGCA------TTT-TC-AATA-CCAGA
i Otocyon_megalotis.JAEUCK010005121.1                   T 601 C 0
s Otolemur_crassicaudatus.k141_321880                       36757 19 +     38679 AGGCA------CTT-TC-AATA-CCAGA
i Otolemur_crassicaudatus.k141_321880                   T 730 C 0
s Otolemur_garnettii.GL873528.1                          18006199 19 -  38779656 AGGCA------CTT-TC-AATA-CCAGA
i Otolemur_garnettii.GL873528.1                         T 720 C 0
s Ovis_aries.CM001582.2                                 134075520 19 - 275406953 AGGCA------TTT-TC-AATA-GGAGA
i Ovis_aries.CM001582.2                                 T 574 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      76734 19 +    140051 AGGCA------TTT-TC-AATA-GGAGA
i Ovis_canadensis.OviCan_scaffold_6251                  T 574 C 0
s Pan_paniscus.CM003386.1                               127572252 19 - 205426864 AGGCA------CTT-TC-AATA-CCAGA
i Pan_paniscus.CM003386.1                               T 742 C 0
s Pan_troglodytes.CM009241.2                            120149405 19 - 196562556 AGGCA------CTT-TC-AATA-CCAGA
i Pan_troglodytes.CM009241.2                            T 724 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  31959 19 +    295523 AGGCA------TTT-TC-AATA-CCAGA
i Panthera_onca.PanOnc_flattened_line_1615              T 588 C 0
s Panthera_pardus.KV860323.1                              3635692 19 +  18214204 AGGCA------TTT-TC-AATA-CCAGA
i Panthera_pardus.KV860323.1                            T 589 C 0
s Panthera_tigris.KE721879.1                              5025340 19 -   6340057 AGGCA------TTT-TC-AATA-CCAGA
i Panthera_tigris.KE721879.1                            T 588 C 0
s Pantholops_hodgsonii.KE114631.1                         1064381 19 -   1292953 AGGCA------TTT-TC-AATA-GGAGA
i Pantholops_hodgsonii.KE114631.1                       T 574 C 0
s Papio_anubis.CM001492.2                               188153347 19 - 188283584 AGGCA------CTT-TC-AATA-CCAGA
i Papio_anubis.CM001492.2                               T 734 C 0
s Papio_cynocephalus.k141_386926                            49559 19 +     76494 AGGCA------CTT-TC-AATA-CCAGA
i Papio_cynocephalus.k141_386926                        T 734 I 133
s Papio_hamadryas.Contig15                               47510744 19 +  47705337 AGGCA------CTT-TC-AATA-CCAGA
i Papio_hamadryas.Contig15                              T 734 C 0
s Papio_kindae.k141_5458022                                 64721 19 -    104429 AGGCA------CTT-TC-AATA-CCAGA
i Papio_kindae.k141_5458022                             T 734 C 0
s Papio_papio.k141_979496                                    4497 11 +     14967 ---------------TC-AATA-CCAGA
i Papio_papio.k141_979496                               n 582 C 0
s Papio_ursinus.k141_3762866                                34915 19 +     35859 AGGCA------CTT-TC-AATA-CCAGA
i Papio_ursinus.k141_3762866                            T 734 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113259 19 -    135482 AGGCA------TTT-TC-AATA-CCAGA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 T 604 C 0
s Perodicticus_ibeanus.k141_117958                           2810 19 -     23713 AGGCA------CTT-GC-AATA-CCAGA
i Perodicticus_ibeanus.k141_117958                      T 726 C 0
s Perodicticus_potto.k141_713187                            22109 19 -     27972 AGGCA------CTT-GC-AATA-CCAGA
i Perodicticus_potto.k141_713187                        T 725 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      40728 19 -     45160 AGGCA------CTT-TC-AATA-CCAGA
i Perognathus_longimembris.PerPac_flattened_line_22291  T 971 C 0
s Peromyscus_maniculatus.KI615518.1                       4947851 18 -   8017169 AGGCA------TTT-TC-AATA-GTG-A
i Peromyscus_maniculatus.KI615518.1                     T 722 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    10039 20 -     36578 AGGTA------CTTTTC-AATA-CCAGA
i Petromus_typicus.PetTyp_scaffold_33007                T 706 I 11
s Phocoena_phocoena.PhoPho_flattened_line_11948            119549 19 -    122454 AGGTA------TTT-TC-AATA-TGAGA
i Phocoena_phocoena.PhoPho_flattened_line_11948         T 597 C 0
s Piliocolobus_badius.k141_1497351                           2605 19 -      3310 AGGCA------CTT-TC-AATA-CCAGA
i Piliocolobus_badius.k141_1497351                      T 697 C 0
s Piliocolobus_gordonorum.k141_902470                       22510 19 -     82327 AGGCA------CTT-TC-AATA-CCAGA
i Piliocolobus_gordonorum.k141_902470                   T 512 C 0
s Piliocolobus_kirkii.k141_557609                           19257 19 +     19957 AGGCA------CTT-TC-AATA-CCAGA
i Piliocolobus_kirkii.k141_557609                       T 700 I 93
s Piliocolobus_tephrosceles.PDMG02000036.1               26737271 19 +  26888534 AGGCA------CTT-TC-AATA-CCAGA
i Piliocolobus_tephrosceles.PDMG02000036.1              T 1056 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            95069 19 +    112873 AGGCA------TTT-TC-AATA-CGATG
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        T 565 C 0
s Pithecia_albicans.k141_991845                             41254 19 -     61926 AGGCA------TTT-TC-AATA-CCAGA
i Pithecia_albicans.k141_991845                         T 720 C 0
s Pithecia_chrysocephala.k141_159118                        22683 19 +     78826 AGGCA------TTT-TC-AATA-CCAGA
i Pithecia_chrysocephala.k141_159118                    T 720 C 0
s Pithecia_hirsuta.k141_1152968                              6634 19 -     15800 AGGCA------TTT-TC-AATA-CCAGA
i Pithecia_hirsuta.k141_1152968                         T 720 C 0
s Pithecia_mittermeieri.k141_2119203                         9832 19 -     16101 AGGCA------TTT-TC-AATA-CCAGA
i Pithecia_mittermeieri.k141_2119203                    T 720 C 0
s Pithecia_pissinattii.k141_1102319                          3141 19 +      9673 AGGCA------TTT-TC-AATA-CCAGA
i Pithecia_pissinattii.k141_1102319                     T 720 C 0
s Pithecia_pithecia.tarseq_313                           13472135 19 -  19735023 AGGCA------TTT-TC-AATA-CCAGA
i Pithecia_pithecia.tarseq_313                          T 720 C 0
s Pithecia_vanzolinii.k141_831006                           11043 19 -     31692 AGGCA------TTT-TC-AATA-CCAGA
i Pithecia_vanzolinii.k141_831006                       T 720 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           3617 19 +     21690 AGGTA------TTT-TC-AATA-CCAGA
i Platanista_gangetica.PlaMin_flattened_line_72990      T 597 C 0
s Plecturocebus_bernhardi.k141_959214                       20474 19 +     44506 AGGCA------TCT-TC-AATA-CCAGA
i Plecturocebus_bernhardi.k141_959214                   T 725 C 0
s Plecturocebus_brunneus.k141_498086                        20684 19 +     67491 AGGCA------TCT-TC-AATA-CCAGA
i Plecturocebus_brunneus.k141_498086                    T 725 C 0
s Plecturocebus_caligatus.k141_2539816                      10925 19 -     98129 AGGCA------TCT-TC-AATA-CCAGA
i Plecturocebus_caligatus.k141_2539816                  T 725 C 0
s Plecturocebus_cinerascens.k141_744510                     20530 19 +    147771 AGGCA------TCT-TC-AATA-CCAGA
i Plecturocebus_cinerascens.k141_744510                 T 725 C 0
s Plecturocebus_cupreus.k141_1223294                        20780 19 -     23762 AGGCA------TCT-TC-AATA-CCAGA
i Plecturocebus_cupreus.k141_1223294                    T 724 C 0
s Plecturocebus_dubius.k141_3565563                          1246 19 -     55515 AGGCA------TCT-TC-AATA-CCAGA
i Plecturocebus_dubius.k141_3565563                     T 725 C 0
s Plecturocebus_grovesi.k141_242819                         20599 19 +    152463 AGGCA------TCT-TC-AATA-CCAGA
i Plecturocebus_grovesi.k141_242819                     T 725 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      7359 19 +      8943 AGGCA------TCT-TC-AATA-CCAGA
i Plecturocebus_hoffmannsi.k141_1595076                 T 725 C 0
s Plecturocebus_miltoni.k141_841561                         10319 19 +    134592 AGGCA------TCT-TC-AATA-CCAGA
i Plecturocebus_miltoni.k141_841561                     T 725 C 0
s Plecturocebus_moloch.k141_890597                          20909 19 -     75465 AGGCA------TCT-TC-AATA-CCAGA
i Plecturocebus_moloch.k141_890597                      T 725 C 0
s Pongo_abelii.NDHI03003816.1                              184797 19 -    373494 AGGCA------CTT-TC-AATA-CCAGA
i Pongo_abelii.NDHI03003816.1                           T 739 C 0
s Pongo_pygmaeus.ctg62                                   19804704 19 +  19899266 AGGCA------CTT-TC-AATA-CCAGA
i Pongo_pygmaeus.ctg62                                  T 740 C 0
s Presbytis_comata.k141_672698                               2839 19 -     15069 AGGCA------CTT-TC-AATA-CCAGA
i Presbytis_comata.k141_672698                          T 746 C 0
s Presbytis_mitrata.k141_860013                              2973 19 +     14865 AGGCA------CTT-TC-AATA-CCAGA
i Presbytis_mitrata.k141_860013                         T 746 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                74145 19 +     78963 AGGCA------CTT-TC-AATA-CCCAA
i Procavia_capensis.ProCapCap_scaffold_15315            T 2096 C 0
s Prolemur_simus.MPIZ01000048.1                           6846181 19 +  12164890 AGGCA------CTT-TC-AATA-CCAGA
i Prolemur_simus.MPIZ01000048.1                         T 848 C 0
s Propithecus_coquerelli.NW_012147997.1                    664798 19 -   2312742 NNNNN------NNN-NN-NNNN-NNNNN
i Propithecus_coquerelli.NW_012147997.1                 T 1440 C 0
s Propithecus_coronatus.k141_1353159                         1325 19 +     11805 AGGCA------CTT-TC-AATA-CCAAA
i Propithecus_coronatus.k141_1353159                    T 743 C 0
s Propithecus_diadema.k141_577245                           40659 19 +     52369 AGGCA------CTT-TC-AATA-CCAAA
i Propithecus_diadema.k141_577245                       T 744 C 0
s Propithecus_edwardsi.k141_1317105                         33048 19 -     44753 AGGCA------CTT-TC-AATA-CCAAA
i Propithecus_edwardsi.k141_1317105                     T 744 C 0
s Propithecus_perrieri.k141_7554                            14969 19 +     27322 AGGCA------CTT-TC-AATA-CCAAA
i Propithecus_perrieri.k141_7554                        T 744 C 0
s Propithecus_tattersalli.k141_907138                       14608 19 -     53241 AGGCA------CTT-TC-AATA-CCAAA
i Propithecus_tattersalli.k141_907138                   T 744 C 0
s Propithecus_verreauxi.k141_158021                         36880 19 -     48185 AGGCA------CTT-TC-AATA-CCAAA
i Propithecus_verreauxi.k141_158021                     T 743 C 0
s Psammomys_obesus.NESX01026517.1                           31282 19 +     77221 AGGCA------CTT-TC-AATA-GTAGA
i Psammomys_obesus.NESX01026517.1                       T 709 C 0
s Pteronotus_parnellii.KE867983.1                            2077 19 -     27784 AGGCA------TTT-TC-AATA-CCAGA
i Pteronotus_parnellii.KE867983.1                       T 575 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        243834 19 -    344369 AGGCA------TTT-TC-AATA-CCAGA
i Pteronura_brasiliensis.PteBra_flattened_line_1343     T 611 C 0
s Pteropus_alecto.KB031157.1                             13244197 19 -  17261082 AGgca------ttt-tt-aatt-ctaga
i Pteropus_alecto.KB031157.1                            T 595 C 0
s Pteropus_vampyrus.KN525959.1                             602148 19 -   3946241 AGGCA------TTT-TT-AATT-CCAGA
i Pteropus_vampyrus.KN525959.1                          T 594 C 0
s Puma_concolor.QAVW01000427.1                          131531922 19 - 161321710 AGGCA------TTT-TC-AATA-CCAGA
i Puma_concolor.QAVW01000427.1                          T 588 C 0
s Pygathrix_cinerea.k141_374971                             26968 19 +     56732 AGGCA------CTT-TC-AATA-CCAGA
i Pygathrix_cinerea.k141_374971                         T 740 C 0
s Pygathrix_nigripes_b.ctg79                                 6803459 19 +   6970761 AGGCA------CTT-TC-AATA-CCAGA
i Pygathrix_nigripes_b.ctg79                               T 740 C 0
s Pygathrix_nigripes_a.k141_101123                             2852 19 +     18040 AGGCA------CTT-TC-AATA-CCAGA
i Pygathrix_nigripes_a.k141_101123                        T 741 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                14021 19 +     68503 AGGCA------TTT-TC-AATA-GGAGA
i Rangifer_tarandus.RanTarSib_scaffold_24239            T 588 C 0
s Rattus_norvegicus.chr11                                13913258 19 +  90463843 AGGCA------TTT-TC-AATA-GCAGA
i Rattus_norvegicus.chr11                               T 670 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1786018 19 +   2252614 AGGCA------TCT-TC-AATA-CCAGA
i Rhinolophus_sinicus.LVEH01000179.1                    T 584 C 0
s Rhinopithecus_bieti.k119_102124                           13405 19 -     14454 AGGCA------CTT-TC-AATA-CCAGA
i Rhinopithecus_bieti.k119_102124                       T 742 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206374731 19 - 206558726 AGGCA------CTT-TC-AATA-CCAGA
i Rhinopithecus_roxellana.NC_044549.1                   T 742 C 0
s Rhinopithecus_strykeri.ctg4                            44852379 11 -  45163003 AGGCA------CTT-TC-A---------
i Rhinopithecus_strykeri.ctg4                           T 737 I 8
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                17490 19 +    109198 AGGCA------TTT-TT-AATT-CCAGA
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            T 592 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       5828 19 +     12214 AGGCA------TTT-TC-AATA-GGAGA
i Saiga_tatarica.SaiTat_scaffold_82192                  T 583 I 10
s Saimiri_boliviensis.NW_024100938.1                     15670369 19 -  43202129 AGGCA------TTT-TC-AATA-CCAGA
i Saimiri_boliviensis.NW_024100938.1                    T 703 C 0
s Saimiri_cassiquiarensis.k141_808270                        2235 19 +     34089 AGGCA------TTT-TC-AATA-CCAGA
i Saimiri_cassiquiarensis.k141_808270                   T 703 C 0
s Saimiri_macrodon.k141_2087127                              2176 19 -     60842 AGGCA------TTT-TC-AATA-CCAGA
i Saimiri_macrodon.k141_2087127                         T 703 C 0
s Saimiri_oerstedii.k141_841116                              2271 19 +     67014 AGGCA------TTT-TC-AATA-CCAGA
i Saimiri_oerstedii.k141_841116                         T 703 C 0
s Saimiri_sciureus.k141_1947592                              2249 19 +     60816 AGGCA------TTT-TC-AATA-CCAGA
i Saimiri_sciureus.k141_1947592                         T 703 C 0
s Saimiri_ustus.k141_1282476                                 2186 19 -     76454 AGGCA------TTT-TC-AATA-CCAGA
i Saimiri_ustus.k141_1282476                            T 703 C 0
s Sapajus_apella.ctg10                                   17338920 19 -  30362882 AGGCA------TGT-TC-AATA-CCAGA
i Sapajus_apella.ctg10                                  T 724 C 0
s Sapajus_macrocephalus.k141_966464                         18295 19 -     62485 AGGCA------TGT-TC-AATA-CCAGA
i Sapajus_macrocephalus.k141_966464                     T 724 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   29580 19 -    114521 AGGCA------TTT-GA-AATA-CCAGA
i Scalopus_aquaticus.ScaAqu_scaffold_9300               T 591 C 0
s Semnopithecus_entellus.k141_1527475                       25393 19 +     26421 AGGCA------CTT-GC-AATA-CCAGA
i Semnopithecus_entellus.k141_1527475                   T 744 C 0
s Semnopithecus_hypoleucos.k141_761524                       5853 19 +     20762 AGGCA------CTT-GC-AATA-CCAGA
i Semnopithecus_hypoleucos.k141_761524                  T 744 C 0
s Semnopithecus_johnii.k141_1351450                         39588 19 +     40653 AGGCA------CTT-GC-AATA-CCAGA
i Semnopithecus_johnii.k141_1351450                     T 744 C 0
s Semnopithecus_priam.k141_198153                           10145 19 -     12194 AGGCA------CTT-GC-AATA-CCAGA
i Semnopithecus_priam.k141_198153                       T 744 C 0
s Semnopithecus_schistaceus.k141_653647                     23567 19 -     27512 AGGCA------CTT-GC-AATA-CCAGA
i Semnopithecus_schistaceus.k141_653647                 T 744 C 0
s Semnopithecus_vetulus.k141_642050                         32586 19 -     33692 AGGCA------CTT-GC-AATA-CCAGA
i Semnopithecus_vetulus.k141_642050                     T 740 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   97472 18 -    120886 AGGCA------TTT-TC-AATA-GCA-A
i Sigmodon_hispidus.SigHis_scaffold_11332               T 694 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            16219 19 +    739146 AGGCA------TTT-TC-AATA-CCAGA
i Solenodon_paradoxus.SolPar_flattened_line_1012        T 573 C 0
s Sorex_araneus.JH798170.1                               17748434 19 -  27805282 AGGCA------TTT-TC-AATT-CCAGA
i Sorex_araneus.JH798170.1                              T 999 C 0
s Spermophilus_dauricus.KZ294190.1                        2237709 19 +   2842873 AGGCA------CTT-TC-AATA-CCAGA
i Spermophilus_dauricus.KZ294190.1                      T 720 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             232600 19 -    276980 AGGCA------TTT-TC-AATA-CCAGA
i Spilogale_gracilis.SpiGra_flattened_line_905          T 596 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            25162 19 +     62062 AGGCA------TTT-TC-AACA-CCAGA
i Suricata_suricatta.SurSur_flattened_line_20339        T 587 C 0
s Sus_scrofa.CM000824.4                                 189270071 19 + 218635234 AGGCA------TTT-TC-AATA-CCAGA
i Sus_scrofa.CM000824.4                                 T 604 C 0
s Symphalangus_syndactylus.tarseq_24                     13899860 19 +  13920577 AGGCA------CTT-TG-AATA-CCAGA
i Symphalangus_syndactylus.tarseq_24                    T 245 I 44
s Tadarida_brasiliensis.TadBra_scaffold_145589               4017 19 -      6213 AGGCA------TTT-TC-AATA-CGAGA
i Tadarida_brasiliensis.TadBra_scaffold_145589          T 564 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               12949 19 +     45698 AGGCA------CTT-TC-AATA-CCAGA
i Tamandua_tetradactyla.TamTet_scaffold_26877           T 590 C 0
s Tapirus_indicus.TapInd_scaffold_176                      804938 19 +   1148477 AGGCA------TTT-GC-AATA-CCAGA
i Tapirus_indicus.TapInd_scaffold_176                   T 592 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  55599 19 +     99546 AGGCA------TTT-GC-AATA-CCAGA
i Tapirus_terrestris.TapTer_scaffold_14939              T 591 C 0
s Tarsius_lariang.k141_609102                               24255 19 +     42269 AGGCA------CTT-TC-AATA-CCAGA
i Tarsius_lariang.k141_609102                           T 721 C 0
s Tarsius_wallacei.k141_48636                               57571 19 +     65473 AGGCA------CTT-TC-AATA-CCAGA
i Tarsius_wallacei.k141_48636                           T 721 C 0
s Theropithecus_gelada.CM009951.1                       194004883 19 - 194193292 AGGCA------CTT-TC-AATA-CCAGA
i Theropithecus_gelada.CM009951.1                       T 734 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             37103 20 -     47444 AGGTA------CTTTTC-AATG-CCAGA
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         T 690 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  1833 19 +      6782 AGGCA------CTT-TC-AATC-CTATA
i Tolypeutes_matacus.TolMat_scaffold_269431             T 2563 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  134087 19 -    259118 AGGCA------TTT-TC-AATA-CCGGA
i Tonatia_saurophila.TonSau_scaffold_3334               T 575 C 0
s Trachypithecus_auratus.k141_738098                        23963 19 +     38948 AGGCA------CTT-GC-AATA-CCAGA
i Trachypithecus_auratus.k141_738098                    T 744 C 0
s Trachypithecus_crepusculus.k141_1588528                   17690 19 -     32910 AGGCA------CTT-GC-AATA-CCAGA
i Trachypithecus_crepusculus.k141_1588528               T 744 C 0
s Trachypithecus_cristatus.k141_27198                       23588 19 +     24652 AGGCA------CTT-GC-AATA-CCAGA
i Trachypithecus_cristatus.k141_27198                   T 744 C 0
s Trachypithecus_francoisi.k141_1178450                      2466 19 -      3559 AGGCA------CTT-GC-AATA-CCAGA
i Trachypithecus_francoisi.k141_1178450                 T 744 C 0
s Trachypithecus_geei.k141_670367                           40412 19 -     54611 AGGCA------CTT-GC-AATA-CCAGA
i Trachypithecus_geei.k141_670367                       T 742 C 0
s Trachypithecus_germaini.k141_878600                         506 11 +      1165 ---------------TC-AATA-CCAGA
i Trachypithecus_germaini.k141_878600                   n 725 I 44
s Trachypithecus_hatinhensis.k141_357672                    23774 19 -     25040 AGGCA------CTT-GC-AATA-CCAGA
i Trachypithecus_hatinhensis.k141_357672                T 744 C 0
s Trachypithecus_laotum.k141_171445                          2435 19 +      3528 AGGCA------CTT-GC-AATA-CCAGA
i Trachypithecus_laotum.k141_171445                     T 744 C 0
s Trachypithecus_leucocephalus.k141_283605                  48802 19 +     51589 AGGCA------CTT-GC-AATA-CCAGA
i Trachypithecus_leucocephalus.k141_283605              T 744 C 0
s Trachypithecus_melamera.k141_238507                       11978 19 +     14732 AGGCA------CTT-GC-AATA-CCAGA
i Trachypithecus_melamera.k141_238507                   T 744 C 0
s Trachypithecus_obscurus.k141_1115109                       2455 19 -     28054 AGGCA------CTT-GC-AATA-CCAGA
i Trachypithecus_obscurus.k141_1115109                  T 744 C 0
s Trachypithecus_phayrei.ctg3                            44657250 19 -  44834318 AGGCA------CTT-GC-AATA-CCAGA
i Trachypithecus_phayrei.ctg3                           T 744 C 0
s Trachypithecus_pileatus.k141_469329                        2260 19 +      3372 AGGCA------CTT-GC-AATA-CCAGA
i Trachypithecus_pileatus.k141_469329                   T 743 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   3427 19 +     90398 AGGCA------TTT-TC-AATA-TGAGA
i Tragulus_javanicus.TraJav_scaffold_14717              T 576 C 0
s Trichechus_manatus.JH594618.1                          16079523 18 +  31416278 AGGCA------CTT-TC-AATA-C-AGA
i Trichechus_manatus.JH594618.1                         T 1856 C 0
s Tupaia_chinensis.KB320831.1                             2789925 19 -   3938065 AGGCA------CTT-TC-AATA-CCAGA
i Tupaia_chinensis.KB320831.1                           T 1228 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    2445 19 +     13056 AGGCA------CTT-TC-AATA-CCAGA
i Tupaia_tana.TupTan_flattened_line_68454               T 968 C 0
s Tursiops_truncatus.MRVK01000923.1                      69311651 19 -  96451834 ACGTA------TTT-TC-AATA-TGAGA
i Tursiops_truncatus.MRVK01000923.1                     T 595 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 24768 19 -     25548 AGGCA------TTT-TC-AATA-CCAGA
i Uropsilus_gracilis.UroGra_scaffold_4143_0             T 570 C 0
s Ursus_maritimus.KK498671.1                              6512388 19 +  28682327 AGGCA------TTT-TC-AATA-CCAGA
i Ursus_maritimus.KK498671.1                            T 615 C 0
s Varecia_rubra.k141_432109                                  3022 19 -     20643 AGGCA------CTT-TC-AATA-CCAGA
i Varecia_rubra.k141_432109                             T 738 C 0
s Varecia_variegata.k141_775891                             22566 19 -     33872 AGGCA------CTT-TC-AATA-CCAGA
i Varecia_variegata.k141_775891                         T 736 C 0
s Vicugna_pacos.KN269600.1                                1522880 19 -   2331223 AGGCA------TTT-TC-AATA-CCAGA
i Vicugna_pacos.KN269600.1                              T 590 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                135332 19 -    281493 AGGCA------TTT-TC-AATA-CCAGA
i Vulpes_lagopus.VulLag_flattened_line_2045             T 606 C 0
s Xerus_inauris.XerIna_scaffold_7898                       124807 19 -    134049 AGGCA------CTT-TC-AATA-CCAGA
i Xerus_inauris.XerIna_scaffold_7898                    T 723 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        211861 19 -    227762 AGGCA------TTT-TC-AATA-CCAGA
i Zalophus_californianus.ZalCal_flattened_line_4097     T 605 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     13046 19 -     20485 AGACA------TTT-TC-AATA-GCAGA
i Zapus_hudsonius.ZapHud_scaffold_64392                 T 712 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           5147 19 -      8775 AGGTA------TTT-TC-AATA-TGAGA
i Ziphius_cavirostris.ZipCav_flattened_line_127025      T 596 C 0
e Echinops_telfairi.JH980316.1                           22994071  0 -  44670279 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               10270 44 +    209709 atgaatgta-tct-ttgtaaagatac-c-at-tt--atcta--cc-at-aaca-tc
s Acinonyx_jubatus.LLWD01000356.1                         2031601 44 +   3721120 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CT-AT-AACA-TC
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    110184 44 -    189883 ATGAATGTA-TCT-TTGTGAGGAGAC-C-AT-TT--ATCTA--CT-CT-AACA-CC
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10654921 44 +  23371972 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7091646 44 -  16596857 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   10615 44 -     22067 GTGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACG-TC
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_3103707                  60542 44 +     61638 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--TC-AT-AACA-TC
i Allenopithecus_nigroviridis.k141_3103707              C 0 C 0
s Allochrocebus_lhoesti.k141_4825038                        52350 44 +     53391 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Allochrocebus_lhoesti.k141_4825038                    C 0 C 0
s Allochrocebus_preussi.k141_1202907                         3075 44 +     72529 ATGAATGTA-TTT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Allochrocebus_preussi.k141_1202907                    C 0 C 0
s Allochrocebus_solatus.k141_787528                          2650 44 +      3797 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Allochrocebus_solatus.k141_787528                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             7823 44 -     18050 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCCA--CC-AT-AACA-TC
i Alouatta_belzebul.k141_1818029                        C 0 I 714
s Alouatta_caraya.k141_5460                                  8936 44 -     11521 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCCA--CC-AT-AACA-TC
i Alouatta_caraya.k141_5460                             C 0 I 714
s Alouatta_discolor.k141_811576                              8500 44 -     21359 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCCA--CC-AT-AACA-TC
i Alouatta_discolor.k141_811576                         C 0 I 714
s Alouatta_juara.k141_1856473                                6877 44 +      7227 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCCA--CC-AT-AACA-TC
i Alouatta_juara.k141_1856473                           T 209 I 14
s Alouatta_macconnelli.k141_1331706                          7791 44 -     10438 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCCA--CC-AT-AACA-TC
i Alouatta_macconnelli.k141_1331706                     C 0 I 714
s Alouatta_nigerrima.k141_2718643                            4447 44 +      7047 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCCA--CC-AT-AACA-TC
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             7733 44 +     10410 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCCA--CC-AT-AACA-TC
i Alouatta_palliata.k141_1316127                        C 0 I 713
s Alouatta_puruensis.k141_1284840                            1536 44 -      4927 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCCA--CC-AT-AACA-TC
i Alouatta_puruensis.k141_1284840                       C 0 I 714
s Alouatta_seniculus.k141_990213                             4466 44 +      6429 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCCA--CC-AT-AACA-TC
i Alouatta_seniculus.k141_990213                        C 0 I 714
s Ammotragus_lervia.NIVO01013474.1                        3518370 44 +   4113121 ATGAATGCA-TCT-TTGTGAAGATAC-C-AT-TT--TTCTA--CC-GT-AACA-TC
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      388544 44 -    631301 CTGAATACA-TTT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            28970 44 +     33004 ATGAATGCA-TCT-TTGTGAAGATAC-C-AT-TT--TTCTA--CC-AT-AACA-TC
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 60186 44 +     78111 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            3124 44 +     22701 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5747082 44 +   9889416 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             3667 44 -    104377 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               3673 44 +     23246 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     1689 44 +      5067 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      15636 44 +     17483 ACGAATGTA-TCT-TTGTGAAGACAG-C-AT-TT--ATCTA--CC-AT-AACA-TA
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 6939 44 -     29036 CAGAATATA-TCT-TTGTGCAGATAC-C-GT-TT--ATCTA--CC-GT-AACA-TC
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9536935 44 +  39197703 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Ateles_geoffroyi_b.tarseq_2582                           C 0 I 702
s Ateles_belzebuth.k141_1348307                             58219 44 +     85812 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Ateles_belzebuth.k141_1348307                         C 0 I 702
s Ateles_chamek.k141_1072810                                 9218 44 +     89302 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Ateles_chamek.k141_1072810                            C 0 I 702
s Ateles_geoffroyi_a.k141_1300742                             13723 44 -     58268 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Ateles_geoffroyi_a.k141_1300742                         C 0 I 702
s Ateles_marginatus.k141_899112                             61714 44 +    119057 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Ateles_marginatus.k141_899112                         C 0 I 702
s Ateles_paniscus.k141_1631200                               3665 44 -     25888 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AATA-TC
i Ateles_paniscus.k141_1631200                          C 0 I 720
s Avahi_laniger.k141_2840928                                 4417 44 -     16375 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                               737 44 +      2719 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26378387 44 +  51448160 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        3618 44 -     13118 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   41465 44 -     72089 ATGAATGCA-TCT-TTGTGAAGATAC-C-AT-TT--TTCTA--CC-AT-AACA-TC
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6557476 44 +   6870073 ATGAATGCA-TCT-TTGTGAAGATCC-C-AT-TT--TTCTA--CC-AT-AACA-TC
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138137715 44 - 161108492 ATGAATGCA-TCT-TTGTGAAGATCC-C-AT-TT--TTCTA--CC-AT-AACA-TC
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     570089 44 -    998990 ATGAATGCA-TCT-TTGTGAAGATCC-C-AT-TT--TTCTA--CC-AT-AACA-TC
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136293448 44 - 158972876 ATGAATGCA-TCT-TTGTGAAGATCC-C-AT-TT--TTCTA--CC-AT-AACA-TC
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1229204 44 -   1914593 ATGAATGCA-TCT-TTGTGAAGATCC-C-AT-TT--TTCTA--CC-AT-AACA-TC
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               111559 44 -    171031 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 10585 44 +    125063 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                12633 44 -    216513 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        5173 44 -    134917 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3217789 44 -   8989139 ATGAATGTA-TCT-TTGTGAAGAAAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           395493 44 -  15254737 ATGAATGTA-TCT-TTGTGAAGAAAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2971227 44 +   6889770 ATGAATGTA-TCT-TTGTGAAGAAAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11516305 44 +  39901454 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   11323 44 +     87036 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11262966 44 -  35597290 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11085495 44 +  39895921 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16452519 44 -  44759192 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21323474 44 + 157394656 ATGAATGCA-TCT-TTGTGAAGATAC-C-AT-TT--TTCTA--CC-GT-AACA-TC
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135704701 44 - 157403528 ATGAATGCA-TCT-TTGTGAAGATAC-C-AT-TT--TTCTA--CC-GT-AACA-TC
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_1557951                  254 44 +       644 ATGAATGGA-TCT-TTGTGAAGACAT-C-AT-TT--ATCTA--CG-AT-AACA-TC
i Capromys_pilorides.CapPil_scaffold_1557951            C 0 C 0
s Carlito_syrichta.NW_007248099.1                          306790 45 +    345090 ATGAATGTA-TCT-TTGTGAAGATAC-A-AT-TT--ATCTA--TC-AT-AACAATT
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               57738 44 +     67245 CTGAATATA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   28222 44 +     33760 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--TC-AT-AACA-TA
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   157033 44 -    276539 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15784395 44 -  24422027 ATGAATATA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--TG-AT-AACA-TT
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15796327 44 -  24440124 ATGAATATA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--TG-AT-AACA-TT
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       174518 44 +    436027 ATGAATATA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--TG-AT-AACA-TT
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18888411 44 -  29618158 ATGAATGTA-TCT-TTGTGAAGATAT-C-AT-TT--ATCTA--CC-AA-AACA-TC
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 5955 44 -     26817 ATGAATGTA-TCT-TTGTGAAGATAT-C-AT-TT--ATCTA--CC-AA-AACA-TC
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                10198 44 +     25043 ATGAATGTA-TCT-TTGTGAAGATAT-C-AT-TT--ATCTA--CC-AA-AACA-TC
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         5827 44 +     21754 ATGAATGTA-TCT-TTGTGAAGATAC-A-AT-TT--ATCTA--TC-AT-AACA-TT
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4361513 44 +   7569818 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         1268 44 -      9338 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6552334 44 +   6739814 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2951608                      53811 44 -     54931 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Cercocebus_chrysogaster.k141_2951608                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                           253 44 -     21101 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Cercocebus_lunulatus.k141_4634644                     n 105 C 0
s Cercocebus_torquatus.k141_3969582                         56326 44 -    107033 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_3371259                        2771 44 -      3853 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Cercopithecus_ascanius.k141_3371259                   T 722 I 86
s Cercopithecus_cephus.k141_598190                          26704 44 +     30494 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Cercopithecus_cephus.k141_598190                      C 0 I 1251
s Cercopithecus_diana.k141_1490386                           2728 44 -      4022 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Cercopithecus_diana.k141_1490386                      C 0 I 49
s Cercopithecus_hamlyni.k141_129805                           499 44 +     16677 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCGA--CC-AT-AACA-TC
i Cercopithecus_hamlyni.k141_129805                     T 104 I 14
s Cercopithecus_lowei.k141_623764                           21411 43 +     35983 -TGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Cercopithecus_lowei.k141_623764                       C 0 I 1247
s Cercopithecus_albogularis.ctg51                              11987947 44 +  12117833 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Cercopithecus_albogularis.ctg51                             C 0 I 1241
s Cercopithecus_mona.ctg12                               46474700 44 +  46592721 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Cercopithecus_mona.ctg12                              C 0 I 1243
s Cercopithecus_neglectus.k141_1474992                      32527 44 +     33420 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Cercopithecus_neglectus.k141_1474992                  C 0 I 61
s Cercopithecus_nictitans.k141_675209                        2563 44 -      3443 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Cercopithecus_nictitans.k141_675209                   C 0 I 61
s Cercopithecus_petaurista.k141_2037881                      3554 44 -      4669 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Cercopithecus_petaurista.k141_2037881                 C 0 I 61
s Cercopithecus_pogonias.k141_1977419                        3349 44 -      4411 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Cercopithecus_pogonias.k141_1977419                   C 0 I 49
s Cercopithecus_roloway.k141_3372345                         2879 44 -      4205 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Cercopithecus_roloway.k141_3372345                    C 0 I 61
s Chaetophractus_vellerosus.ChaVel_scaffold_1070855          1092 44 -      1715 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Chaetophractus_vellerosus.ChaVel_scaffold_1070855     C 0 C 0
s Cheirogaleus_major.k141_1157592                           56722 44 -     68416 ATGAATATA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            5764 44 +     13308 ATGAATATA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             3228 44 -     18223 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             20251 44 +     25473 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           39290 44 +     57117 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          43965 44 +     54541 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15959560 44 +  43084221 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCCA--CC-AT-AACA-TC
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         68781 44 +    196370 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          12961 44 +     40510 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15136161 44 -  15256731 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      31207 44 -     53260 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101141656 44 + 101219884 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                14692 44 -     21363 ATGAATGCA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTG--CC-AT-AACA-TC
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           760003 44 +    964067 ATGAATGCA-TCT-TTGTGAAGATAG-C-AT-TT--ATCTG--CC-AT-AACA-TC
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_141308              6804 44 -     12508 ATGAATGTA-TCT-TTCTGAAGATAC-C-AT-TT--ATCTA--CT-AT-AACA-TT
i Chrysochloris_asiatica.ChrAsi_scaffold_141308         C 0 C 0
s Colobus_angolensis.KN985967.1                          10880235 44 +  10971483 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147661393 44 + 156195979 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            13380 44 +     23629 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60610993 44 +  78930452 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         37451 44 -     40477 ATGAATGTA-TCT-TGGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-AC
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 275273 44 -    399297 ATGAATGTA-TCT-CTGTGAAGATAC-C-AT-TT--ATCTA--CT-AT-AACA-CC
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53026805 44 +  72327488 ATGAACGTA-TCT-TTGTGAAGATAG-C-AT-TT--ATCTA--CT-AC-AACA-CC
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             17928 44 -     19186 ATGAATGTA-TCT-TTGTGAAGATAT-C-AT-TC--ATCTA--CC-AT-AACA-TC
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            49613 44 -     70449 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  205978 44 -    956709 ATGAGGGTG-TCT-TTGTGAAGATAC-C-AT-TT--ATCTC--CC-AT-AACA-TC
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 28338 45 -     67205 ATGAATGAA-TCTTTTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                15167 44 +     26546 ATGAATATA-TCT-TTGTGAGGATAC-T-AT-TT--ATCTA--CC-AT-AACA-TC
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             56650 44 -    236241 ATGAATATA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          179902 44 -   6883506 ATGAATGTA-TCT-TTGTGAAGATTC-C-AT-TT--ATCTA--CT-AT-AACA-TC
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16842590 44 +  31942871 ATAAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACG-TC
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80035071 44 -  96802777 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18697048 44 -  18957592 CTGAATACA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-GT-AACA-TC
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 320172 44 +    993696 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                    814 44 +    151128 ATGAATGTA-TCT-TTGTGAAGATAC-C-GT-TT--ATCTA--CC-AT-AACA-TC
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   155445 44 +    228994 ATAAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3653194 44 +   4240102 ACGAATGTG-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 24751 44 +     28912 ACGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                33911 44 -     73477 ATGAATATA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--TG-AT-AACA-TC
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Eidolon_helvum.KE772537.1                                 10418 44 +     24177 ATGAATATA-TCT-TTCTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AGCA-TC
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1489732 44 +   1727528 ATGAATGCA-TCT-TTGTGAAGATAC-C-AT-TT--TTCTA--CC-AT-AGCA-TC
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7804483 44 +  15467074 ATGAATGTA-TCT-TTGTGAAGATAC-A-AT-TT--ATCTA--CC-AT-AGCA-TC
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        237463 44 -    369425 ATGAATGTA-TCT-TTGTGAAGATAG-C-AT-TT--ATCTA--CT-AT-AACA-CC
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           4476 44 -      7838 ATGAATGTA-TCT-TTGTGAAGATAG-C-AT-TT--ATCTG--CT-AT-AACA-CC
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85869378 44 +  99434291 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4702007 44 +   6522550 ATGAATATA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AC-AACA-TC
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5850906 44 -   7175178 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13349408 44 +  41866177 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          10898 44 +     92910 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11530695 44 +  16010500 ATAAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--GC-AT-ACCC-TC
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48768339 44 -  48907691 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          313273 44 +    330699 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             59703 44 +     89355 ATGAATGTA-TCT-TTGTAAGGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              2769 44 +     13586 ATGAATATA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               2704 44 -      6809 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--TC-AT-AACA-TC
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             9180 44 +     36558 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             5494 44 +     60246 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 8977 44 +    109717 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               13356 44 +     16540 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                13632 44 +     27497 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           16098 44 +     26808 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                30822 44 +     46535 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--TC-AT-AACA-TC
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              13545 44 -     29447 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--TC-AT-AACA-TC
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129890577 44 - 159252932 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129277652 44 - 158578461 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 18787 44 +     52776 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13890516 44 -  19261668 ATGAATATA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-CT-AACA-TC
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     208688 44 -    847004 GCGAATGTA-TCT-CTGTGAAGACAG-C-AT-TT--ATCTA--CC-GT-AACA-TA
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           11069 44 -     43889 GCGAATGTA-TCT-CTGTGAAGACAG-C-AT-TT--ATCTA--CC-GT-AACA-TA
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           8133 44 +     27357 GCGAATGTA-TCT-TTGTGAAGACAG-C-AT-TT--ATCTA--CC-GT-AACA-TA
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               154047 44 +    324696 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-ACCA-TC
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    179247 44 -    189561 ATGAATGCA-TTT-TTGTGAAGATAC-C-AT-TT--TTCTA--CC-AT-AACA-TC
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           10454 44 -     18683 ATGAATGTG-TCT-TTGTGAAGACAC-C-AT-TT--ATCTA--CC-CT-AACA-TC
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               2927 44 -     14630 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATGTA--CC-AT-AACG-TC
i Gorilla_beringei.k141_111300                          C 0 I 742
s Gorilla_gorilla.LT578340.1                            119650026 44 - 195582420 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATGTA--CC-AT-AACG-TC
i Gorilla_gorilla.LT578340.1                            C 0 I 742
s Graphiurus_murinus.GraMur_scaffold_4493                   74983 44 +    118900 ATGAATGTA-TCT-TTGTGAAGACAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                         3329 44 +      3980 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             25804 44 +     26611 GTGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             3266 44 +     56096 ATGAATGTA-TCT-TTGTGAAGATAT-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        26541 44 -     42470 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        43135 44 -     54384 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              14822 44 +     53719 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                25746 44 -     91191 ATGAATGCA-TCT-TTGTGAAGATAC-C-AT-TT--TTCTA--CC-GT-AACA-TC
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2548897 44 +  31725842 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               54300 44 +     73687 ATGAATATA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--TG-AT-AACA-TC
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              145311 44 +    277961 ATGAATGTA-TCT-TTTTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      276650 44 -    477199 ATGAATATA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              5808 44 -      9143 ATGAATATA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg2405                                   13701 44 -     15084 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Hoolock_leuconedys.ctg2405                               I 37 I 56
s Hyaena_hyaena.HyaHya_flattened_line_20729                 13876 44 -     67322 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16812 44 -    119109 ATGAATATA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--TG-AT-AACA-TC
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              2745 43 +      5897 ATG-ATGTA-TCT-TTGTGAAGATGC-C-AT-TT--ATGTAG--C-AT-AACA-TC
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_1485652                              1165 44 -      1697 ATGAATGTA-TCT-TTGTGAAGATGC-C-AT-TT--ATGTAG--C-AT-AACA-TC
i Hylobates_agilis.k141_1485652                         C 0 C 0
s Hylobates_klossii.k141_466549                              9189 44 +     11537 ATGAATGTA-TCT-TTGTGAAGATGC-C-AT-TT--ATGTAG--C-AT-AACA-TC
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14622290 44 -  25970782 ATGAATGTA-TCT-TTGTGAAGATGC-C-AT-TT--ATGTAG--C-AT-AACA-TC
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1133650                            2179 44 -      2775 ATGAATGTA-TCT-TTGTGAAGATGC-C-AT-TT--ATGTAG--C-AT-AACA-TC
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             30782 44 -     60944 ATGAATGTA-TCT-TTGTGAAGATGC-C-AT-TT--ATGTAG--C-AT-AACA-TC
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     3947 44 +     22540 ATAAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7123812 44 +  13083262 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_1884019                                   1005 44 -      2196 ATGAATGTA-TCT-TTGTGAAGATAA-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Indri_indri.k141_1884019                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               7060 44 +     17520 ATGAATGTG-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8563355 44 +  11848649 GTGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACG-TC
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               21891 42 +     37189 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT---CA-TC
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          47789 44 -    147782 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Lagothrix_lagothricha.k141_12968                      C 0 I 717
s Lasiurus_borealis.LasBor_scaffold_5102                   111800 45 -    115756 ATGAACATA-TCT-TTGTGAAGATAC-A-ATTTT--ATCTA--CC-AC-AACA-TC
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258404824 44 - 285822530 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        21696 44 +     39228 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            51069 44 +     63517 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        76311 44 +    116806 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     29334 44 -     33031 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3083590 44 -   3498232 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    10800 44 +     22452 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AGCA-TC
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            134218 44 +   3060487 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19245422 44 +  19376315 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            8436 44 +     84689 ATGAATGTA-TCT-TTGTGAAGACGG-C-AT-TT--ATCTA--CC-AT-AACA-TA
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3776187 44 +   6799190 ATGAATGTA-TCT-TTGTGAAGACGG-C-AT-TT--ATCTA--CC-AT-AACA-TA
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20589077 44 -  62548349 ATGAATGTA-TCT-TTGTGAAGATAC-A-AT-TT--ATCTA--CC-AT-AACA-TC
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11084951 44 +  39895028 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             17108 44 +     74745 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12703614 44 +  12821369 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                 511 44 -      3136 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           44012 44 +     63263 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_1068107                               12588 44 +     12679 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Macaca_fuscata.k119_1068107                           C 0 C 0
s Macaca_leonina.k141_3421209                                2161 44 +      3017 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Macaca_leonina.k141_3421209                           C 0 C 0
s Macaca_maura.k141_251854                                  43773 44 -     79256 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196032691 44 + 196197964 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11442797 44 +  11645122 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   2720 44 -     46448 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                2551 44 -      3617 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Macaca_radiata.k141_1580474                           C 0 C 0
s Macaca_siberu.k141_741907                                 12883 44 -     55006 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43837920 44 +  43892939 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_116940                                5142 44 -      5978 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Macaca_thibetana.k99_116940                           T 719 I 61
s Macaca_tonkeana.k141_2870633                               2725 44 -     27140 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                699836 44 +    802869 ATGAATATA-TCT-TTCTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43434582 44 -  43563597 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4447408 44 -   4543643 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            144328 44 +    252755 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACG-TC
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             34402 44 +     58827 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACG-TC
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36871652 44 +  64221397 ACGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       62491 44 -    234502 ATGAATATA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_142001             193 44 -      2090 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Mellivora_capensis.MelCap_flattened_line_142001       T 104 n 40
s Meriones_unguiculatus.MerUng_scaffold_52233                9762 44 +     15977 ATGAATGTA-TCT-TTGTGAAGTTAC-C-AT-TT--ATCTG--CT-GT-AACA-CC
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1044545 44 -  26018355 ACGAATGTA-TCT-TTGTGAAGATAG-C-AT-TT--ATCAA--CT-AT-AACA-CC
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_183284                   1930 44 +      2166 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AGCA-TC
i Mesoplodon_bidens.MesBid_scaffold_183284              C 0 C 0
s Microcebus_murinus.CM007691.1                          16507944 44 +  47401472 ATGAATGTA-TCT-TTGTGAAGATAC-A-AT-TT--ATCTA--CC-AT-AACA-TC
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  29221 44 -     48017 ATGAATGTA-TCT-TTGTGAAGATGC-C-AT-TT--ATCTA--CC-AT-AACA-AC
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               20915 44 -     32043 CTGAATATA-TCT-TTGTGAGGATAC-C-AT-TT--ATCTA--CC-AT-AGCG-TC
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22817663 44 -  98408828 ATGAATGTA-TCT-TTGTGAAGATAG-C-AT-TT--ATCTA--CT-AT-AACA-CC
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8207676 44 +  10048721 ATGAATATA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AC-AACA-TC
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            32347 44 +     45743 ATGAATATA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AC-AACA-TC
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        33241 44 +     34273 ATGAATGCA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Miopithecus_ogouensis.k141_2666161                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         8895 44 -    104932 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AATA-TC
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     3349 44 +      8497 ATGAATGTA-TCT-TTGTGAAGATAC-A-AT-TT--ATCTA--CC-AT-AACA-TC
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 144655 44 +    154973 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                159425 44 +    265003 CTGAATATA-TCT-GTGTGAAGATAC-C-AT-TC--ATCTA--CC-AT-AACA-TC
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 2834 44 -      4346 ATGAATGCA-TCT-TTGTGAAGATAT-C-AT-TT--TTCTA--CC-AT-AACA-TC
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  142517 44 -    168139 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          17318 43 -    100666 ATGAGAATA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AG--ACA-TC
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70764176 44 +  92629107 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CT-AT-AACA-CC
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75487213 44 +  98207768 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CT-AT-AACA-CC
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67553384 44 +  89017189 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CT-AT-AACA-CC
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74328394 44 +  97876770 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CT-AT-AACA-CC
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              8936 45 +     98495 ATGAATGTA-TCT-TTGTGAAGACACNC-AT-TT--ATCTA--CC-AT-AACA-TC
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4421760 44 -  28371801 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     87889 44 -    117718 ATGAATGGA-TCT-TTGTGAAGATAC-C-AT-TC--ATCTA--CC-AT-AACA-TC
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               965638 43 +   8389877 ATGAATATA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AG--ACA-TC
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5017329 43 +   6462685 ATGAATATA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AG--ACA-TC
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3463225 43 -   3747815 ATGAATATA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AG--ACA-TC
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         8420 43 +     66751 ATGAATATA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AG--ACA-TC
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3294 44 -      8794 ATGAATGTA-TCT-TTGTGGAGATAC-C-AT-TT--ATCTG--CC-AT-AACA-TC
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            108272 44 +    362372 ATGAATGTA-TCA-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               5620 44 +     48152 ATGAATGTA-TCT-TTGTGAAGATAC-C-GT-TT--ATCTA--CC-AT-AACA-TC
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4482494 44 -  14209539 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3949267 44 -   4490290 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  47542 44 +     94413 CCGAATATA-TCT-TTGTGAGGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_302224                             330 44 +      1516 atgaatgta-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AC-AACA-TC
i Nomascus_annamensis.k141_302224                       I 37 I 56
s Nomascus_concolor.k141_49591                               1451 44 +      2014 atgaatgta-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AC-AACA-TC
i Nomascus_concolor.k141_49591                          I 736 C 0
s Nomascus_gabriellae.k141_642452                             376 44 +      2851 atgaatgta-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Nomascus_gabriellae.k141_642452                       I 19 C 0
s Nomascus_siki_b.tarseq_80                             23291 44 -  18771707 atgaatgta-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Nomascus_siki_b.tarseq_80                         I 772 C 0
s Nomascus_siki_a.k141_595747                                  1004 44 +      4512 atgaatgta-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Nomascus_siki_a.k141_595747                             I 19 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                27944 44 +   3668941 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65564782 44 -  95554990 ACGAATGTA-TCT-TTGTGAAGACGG-C-AT-TT--ATCTA--CC-AT-AACA-TA
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            1627 44 +      6470 ACGAATGTA-TCT-TTGTGAAGACGG-C-AT-TT--ATCTA--CC-AT-AACA-TA
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65667152 44 +  89412551 ACGAATGTA-TCT-TTGTGAAGACGG-C-AT-TT--ATCTA--CC-AT-AACA-TA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4993775 44 -  23139505 ATGAATGAA-TCC-TTGTGAAGATAA-C-AT-TT--ATCTA--CC-GT-AACA-TC
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3683361 44 +  10294119 ATGAATGGA-TCT-TTGTGAAGATCC-T-AT-TT--ATCTA--CC-AT-AACA-TG
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             677150 44 -   3126709 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1077962 44 +   1425656 ATGAATGCA-TCT-TTGTGAAGATAC-C-AT-TT--TTCTA--CC-AT-AGCA-TC
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         35117 44 +     78940 ATGAATGCA-TCT-TTGTGAAGATAC-C-AT-TT--TTCTA--CC-AT-AACA-TC
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  122938 44 +    145789 ATGAATGTA-TCT-TTGTGAAGATAG-C-AT-TT--ATCTA--CT-AT-AACA-CC
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  34693 44 +     62360 ATGAATGTA-TCT-TTGTGAAGATAG-C-AT-TT--ATCTA--CT-AC-AACA-CC
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7222951 44 -   7562323 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              41333 44 -     66828 ATGAATGTA-TCA-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141873458 44 + 163896628 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AGCA-TC
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      305283 44 -    505867 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       36776 44 +     38679 GCGAATGTA-TCT-TTGTGAAGACAG-C-AT-TT--ATCTA--CC-GT-AACA-TA
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18006218 44 -  38779656 GCGAATGTA-TCT-TTGTGAAGACAG-C-AT-TT--ATCTA--CC-GT-AACA-TA
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134075539 44 - 275406953 ATGAATGCA-TCT-TTGTGAAGATAC-C-AT-TT--TTCTA--CC-GT-AACA-TC
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      76753 44 +    140051 ATGAATGCA-TCT-TTGTGAAGATAC-C-AT-TT--TTCTA--CC-GT-AACA-TC
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127572271 44 - 205426864 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATGTA--CC-AT-AACA-TC
i Pan_paniscus.CM003386.1                               C 0 I 742
s Pan_troglodytes.CM009241.2                            120149424 44 - 196562556 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATGTA--CC-AT-AACA-TC
i Pan_troglodytes.CM009241.2                            C 0 I 742
s Panthera_onca.PanOnc_flattened_line_1615                  31978 44 +    295523 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3635711 44 +  18214204 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5025359 44 -   6340057 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1064400 44 -   1292953 ATGAATGCA-TCT-TTGTGAAGATAC-C-AT-TT--TTCTA--CC-GT-AACA-TC
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188153366 44 - 188283584 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             2927 44 +      5367 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Papio_cynocephalus.k141_883042                        n 133 C 0
s Papio_hamadryas.Contig15                               47510763 44 +  47705337 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 64740 44 -    104429 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    4508 44 +     14967 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_3762866                                34934 44 +     35859 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Papio_ursinus.k141_3762866                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113278 44 -    135482 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           2829 44 -     23713 ACGAATGTA-TCT-TTGTGAAGACAG-C-AT-TT--ATCTA--CC-AT-AACA-TA
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            22128 44 -     27972 ACGAATGTA-TCT-TTGTGAAGACAG-C-AT-TT--ATCTA--CC-AT-AACA-TA
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      40747 44 -     45160 ACGAATATA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACC-TC
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4947869 44 -   8017169 ATGAATGTA-TCT-TTGTGAAGATAG-C-AT-TT--ATCTA--CT-AT-AACA-CC
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    10070 32 -     36578 --------------TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Petromus_typicus.PetTyp_scaffold_33007                I 11 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            119568 44 -    122454 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-GT-AACA-TC
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           2624 44 -      3310 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       22529 44 -     82327 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Piliocolobus_gordonorum.k141_902470                   C 0 I 14
s Piliocolobus_kirkii.k141_929665                             383 44 +      7694 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Piliocolobus_kirkii.k141_929665                       n 93 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26737290 44 +  26888534 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            95088 44 +    112873 ATGAATATA-TCT-CTGTGAAGATAC-C-AT-TT--ATCTA--CC-AC-AACA-TC
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             41273 44 -     61926 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        22702 44 +     78826 ATGAATGTA-TTT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              6653 44 -     15800 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                         9851 44 -     16101 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          3160 44 +      9673 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13472154 44 -  19735023 ATGAATGTA-TCC-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           11062 44 -     31692 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           3636 44 +     21690 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--GTCTA--CC-AT-AACA-TC
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       20493 44 +     44506 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        20703 44 +     67491 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      10944 44 -     98129 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     20549 44 +    147771 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        20799 44 -     23762 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          1265 44 -     55515 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         20618 44 +    152463 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      7378 44 +      8943 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                         10338 44 +    134592 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          20928 44 -     75465 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              184816 44 -    373494 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19804723 44 +  19899266 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               2858 44 -     15069 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              2992 44 +     14865 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                74164 44 +     78963 ATGAATATA-TCT-TAGTGAAGATAC-C-AT-TT--ATCTA--TG-AT-AACA-TC
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6846200 44 +  12164890 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    664817 44 -   2312742 NNNNNNNNN-NNN-NNNNNNNNNNNN-N-NN-NN--NNNNN--NN-NN-NNNN-NN
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         1344 44 +     11805 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           40678 44 +     52369 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         33067 44 -     44753 ATGAATGTA-TCT-TTGTGGAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            14988 44 +     27322 ATGAATGTA-TCT-TTGTGGAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       14627 44 -     53241 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         36899 44 -     48185 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           31301 44 +     77221 ATGAATGTA-TCT-TTGTGAAGTTAC-C-AT-TT--ATCTA--CT-AT-AACA-CC
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            2096 44 -     27784 CTGAATATA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-CACA-TC
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        243853 44 -    344369 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13244216 44 -  17261082 atGAATATA-TCT-TTCTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             602167 44 -   3946241 ATGAATATA-TCT-TTCTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131531941 44 - 161321710 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             26987 44 +     56732 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6803478 44 +   6970761 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             2871 44 +     18040 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                14040 44 +     68503 ATGAATGCA-TCT-TTGTGAAGATAC-C-AT-TT--TTCTA--CC-AT-AGCA-TC
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13913277 44 +  90463843 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CT-AT-CACA-CC
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1786037 44 +   2252614 ATGAATATA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           13424 44 -     14454 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Rhinopithecus_bieti.k119_102124                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206374750 44 - 206558726 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44852398 44 -  45163003 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Rhinopithecus_strykeri.ctg4                           I 8 I 1252
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                17509 44 +    109198 ATGAATATA-TCT-TTCTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       5857 33 +     12214 ------------T-TTGTGAAGATAC-C-AT-TT--TTCTA--CC-AT-AACA-TC
i Saiga_tatarica.SaiTat_scaffold_82192                  I 10 C 0
s Saimiri_boliviensis.NW_024100938.1                     15670388 44 -  43202129 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Saimiri_boliviensis.NW_024100938.1                    C 0 I 703
s Saimiri_cassiquiarensis.k141_808270                        2254 44 +     34089 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Saimiri_cassiquiarensis.k141_808270                   C 0 I 703
s Saimiri_macrodon.k141_2087127                              2195 44 -     60842 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Saimiri_macrodon.k141_2087127                         C 0 I 703
s Saimiri_oerstedii.k141_841116                              2290 44 +     67014 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Saimiri_oerstedii.k141_841116                         C 0 I 703
s Saimiri_sciureus.k141_1947592                              2268 44 +     60816 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Saimiri_sciureus.k141_1947592                         C 0 I 703
s Saimiri_ustus.k141_1282476                                 2205 44 -     76454 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Saimiri_ustus.k141_1282476                            C 0 I 703
s Sapajus_apella.ctg10                                   17338939 44 -  30362882 ATGAATGTA-TCT-TTGTGAAGATAT-C-AT-TT--ATCTA--CC-AA-AACA-TC
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         18314 44 -     62485 ATGAATGTA-TCT-TTGTGAAGATAT-C-AT-TT--ATCTA--CC-AA-AACA-TC
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   29599 44 -    114521 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1527475                       25412 44 +     26421 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Semnopithecus_entellus.k141_1527475                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       5872 44 +     20762 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_1351450                         39607 44 +     40653 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Semnopithecus_johnii.k141_1351450                     C 0 C 0
s Semnopithecus_priam.k141_198153                           10164 44 -     12194 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Semnopithecus_priam.k141_198153                       C 0 I 61
s Semnopithecus_schistaceus.k141_653647                     23586 44 -     27512 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Semnopithecus_schistaceus.k141_653647                 C 0 I 61
s Semnopithecus_vetulus.k141_642050                         32605 44 -     33692 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCAA--CC-AT-AACA-TC
i Semnopithecus_vetulus.k141_642050                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   97490 44 -    120886 ATGAATGTA-TCT-TTGGGAAGATAG-C-AT-TT--ATCTA--CT-AC-AACA-CC
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            16238 44 +    739146 ATGGATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CT-AT-AACA-TC
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17748453 44 -  27805282 ATGAATGCA-TCT-TTGTGAAGATAC-C-AT-TC--ATCTA--CC-AT-AACA-TC
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2237728 44 +   2842873 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             232619 44 -    276980 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            25181 44 +     62062 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189270090 44 + 218635234 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        13283 44 -  13920577 atgaatgta-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Symphalangus_syndactylus.tarseq_24                    I 19 I 56
s Tadarida_brasiliensis.TadBra_scaffold_145589               4036 44 -      6213 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-GACA-TC
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               12968 44 +     45698 ATGAATGTA-TCT-TTGTGGAGATAC-C-AT-TT--ATCTG--CC-AT-AACA-TC
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      804957 44 +   1148477 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  55618 44 +     99546 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               24274 44 +     42269 ATGAATGTA-TCT-TTGTGAAGATAC-A-AT-TT--ATCTA--CC-AT-AACA-TT
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               57590 44 +     65473 ATGAATGTA-TCT-TTGTGAAGATAC-A-AT-TT--ATCTA--CC-AT-AACA-TT
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194004902 44 - 194193292 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             37123 44 -     47444 ATGAATGTA-TCA-TTGGGAAGATAC-C-GT-TT--ATCTA--CC-AT-AACA-TC
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  1852 44 +      6782 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  134106 44 -    259118 CTGAATATA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        23982 44 +     38948 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   17709 44 -     32910 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_27198                       23607 44 +     24652 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Trachypithecus_cristatus.k141_27198                   C 0 C 0
s Trachypithecus_francoisi.k141_1178450                      2485 44 -      3559 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Trachypithecus_francoisi.k141_1178450                 C 0 C 0
s Trachypithecus_geei.k141_670367                           40431 44 -     54611 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_809503                       16430 44 +     17312 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Trachypithecus_germaini.k141_809503                   T 725 I 61
s Trachypithecus_hatinhensis.k141_357672                    23793 44 -     25040 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Trachypithecus_hatinhensis.k141_357672                C 0 I 61
s Trachypithecus_laotum.k141_171445                          2454 44 +      3528 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Trachypithecus_laotum.k141_171445                     C 0 I 61
s Trachypithecus_leucocephalus.k141_283605                  48821 44 +     51589 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       11997 44 +     14732 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       2474 44 -     28054 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44657269 44 -  44834318 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_469329                        2279 44 +      3372 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Trachypithecus_pileatus.k141_469329                   C 0 I 49
s Tragulus_javanicus.TraJav_scaffold_14717                   3446 44 +     90398 ATGAGTGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16079541 44 +  31416278 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2789944 44 -   3938065 ATGAATGTG-TCT-TTGTGAAGACAC-C-AT-TT--ATCTA--CC-AT-AACA-TT
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    2464 44 +     13056 ATGAATGTG-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TT
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69311670 44 -  96451834 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 24787 44 -     25548 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6512407 44 +  28682327 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  3041 44 -     20643 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             22585 44 -     33872 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1522899 44 -   2331223 ATGAATGTA-TCT-TTGTGAAGAAAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                135351 44 -    281493 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       124826 44 -    134049 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        211880 44 -    227762 ATGAATGTA-TCT-TTGTGAAGATAC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     13065 44 -     20485 GTGAATGTA-TCT-TTGTGGCGATAT-C-AT-TT--ATCTA--CC-AT-AATA-TC
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           5166 44 -      8775 ATGAATGTA-TCT-TTGTGAAGATGC-C-AT-TT--ATCTA--CC-AT-AACA-TC
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Echinops_telfairi.JH980316.1                           22994071  0 -  44670279 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               10314 14 +    209709 ca-aagcat-gatgag
s Acinonyx_jubatus.LLWD01000356.1                         2031645 14 +   3721120 CA-AAGCAT-AATGAG
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    110228 14 -    189883 CA-AAGCAT-AATAGC
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 I 7
s Ailuropoda_melanoleuca.LNAT01000321.1                  10654965 14 +  23371972 CA-AAGCAT-AATGAG
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 I 5
s Ailurus_fulgens.LNAC01000003.1                          7091690 14 -  16596857 CA-AAGCAT-AATGAG
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   10659 14 -     22067 CA-AAGCAT-AATGAG
i Allactaga_bullata.AllBul_scaffold_70162               C 0 I 5
s Allenopithecus_nigroviridis.k141_3103707                  60586 14 +     61638 CA-AAGCAT-AATGAG
i Allenopithecus_nigroviridis.k141_3103707              C 0 I 35
s Allochrocebus_lhoesti.k141_4825038                        52394 14 +     53391 CA-AAGCAT-AATGAG
i Allochrocebus_lhoesti.k141_4825038                    C 0 I 35
s Allochrocebus_preussi.k141_1202907                         3119 14 +     72529 CA-AAGCAT-AATGAG
i Allochrocebus_preussi.k141_1202907                    C 0 I 35
s Allochrocebus_solatus.k141_787528                          2694 14 +      3797 CA-AAGCAT-AATGAG
i Allochrocebus_solatus.k141_787528                     C 0 I 35
s Alouatta_belzebul.k141_1818029                             8581 14 -     18050 CA-AAGCAT-AATGAG
i Alouatta_belzebul.k141_1818029                        I 714 T 714
s Alouatta_caraya.k141_5460                                  9694 14 -     11521 CA-AAGCAT-AATGAG
i Alouatta_caraya.k141_5460                             I 714 T 714
s Alouatta_discolor.k141_811576                              9258 14 -     21359 CA-AAGCAT-AATGAG
i Alouatta_discolor.k141_811576                         I 714 T 714
s Alouatta_juara.k141_298055                                  549 14 +      1823 CA-AAGCAT-AATGAG
i Alouatta_juara.k141_298055                            I 43 I 35
s Alouatta_macconnelli.k141_1331706                          8549 14 -     10438 CA-AAGCAT-AATGAG
i Alouatta_macconnelli.k141_1331706                     I 714 T 714
s Alouatta_nigerrima.k141_2718643                            4491 14 +      7047 CA-AAGCAT-AATGAA
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             8490 14 +     10410 CA-AAGCAT-AATGAG
i Alouatta_palliata.k141_1316127                        I 713 C 0
s Alouatta_puruensis.k141_1284840                            2294 14 -      4927 CA-AAGCAT-AATGAG
i Alouatta_puruensis.k141_1284840                       I 714 T 714
s Alouatta_seniculus.k141_990213                             5224 14 +      6429 CA-AAGCAT-AATGAG
i Alouatta_seniculus.k141_990213                        I 714 T 714
s Ammotragus_lervia.NIVO01013474.1                        3518414 14 +   4113121 CA-AAGCAT-AATGAA
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      388588 12 -    631301 CA-AAGCAT-AATG--
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            29014 14 +     33004 CA-AAGCAT-AATGAA
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 60230 14 +     78111 CA-AAGCAT-AATGAG
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            3168 14 +     22701 CA-AAGCAT-AATGAG
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5747126 14 +   9889416 CA-AAGCAT-AATGAG
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             3711 14 -    104377 CA-AAGCAT-AATGAG
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               3717 14 +     23246 CA-AAGCAT-AATGAG
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     1733 14 +      5067 CA-AAGCAT-AATGAG
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 I 7
s Arctocebus_calabarensis.k141_1161114                      15680 14 +     17483 CC-AAGCAT-AATAAA
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 6983 12 -     29036 CG-AAGCAT-AATG--
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9537681 14 +  39197703 CA-AAGCAT-AATGAG
i Ateles_geoffroyi_b.tarseq_2582                           I 702 T 702
s Ateles_belzebuth.k141_1348307                             58965 14 +     85812 CA-AAGCAT-AATGAG
i Ateles_belzebuth.k141_1348307                         I 702 T 702
s Ateles_chamek.k141_1072810                                 9964 14 +     89302 CA-AAGCAT-AATGAG
i Ateles_chamek.k141_1072810                            I 702 T 702
s Ateles_geoffroyi_a.k141_1300742                             14469 14 -     58268 CA-AAGCAT-AATGAG
i Ateles_geoffroyi_a.k141_1300742                         I 702 T 702
s Ateles_marginatus.k141_899112                             62460 14 +    119057 CA-AAGCAT-AATGAG
i Ateles_marginatus.k141_899112                         I 702 T 702
s Ateles_paniscus.k141_1631200                               4429 14 -     25888 CA-AAGCAT-AATGAG
i Ateles_paniscus.k141_1631200                          I 720 T 720
s Avahi_laniger.k141_2840928                                 4461 14 -     16375 CA-AAGCAT-AATGAA
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                               781 14 +      2719 CA-AAGCAT-AATGAG
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26378431 14 +  51448160 CA-AAGCAT-AATGAG
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        3662 14 -     13118 CA-AAGCAT-AATGAG
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   41509 14 -     72089 CA-AAGCAT-AATGAA
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6557520 14 +   6870073 CA-AAGCAT-AATGAA
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138137759 14 - 161108492 CA-AAGCAT-AATGAA
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     570133 14 -    998990 CA-AAGCAT-AATGAA
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136293492 14 - 158972876 CA-AAGCAT-AATGAA
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1229248 14 -   1914593 CA-AAGCAT-AATGAA
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               111603 13 -    171031 -A-AAGCAT-AATGAG
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 10629 13 +    125063 -A-AAGCAT-AATGAG
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                12677 13 -    216513 -A-AAGCAT-AATGAG
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        5217 13 -    134917 -A-AAGCAT-AATGAG
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3217833 14 -   8989139 CA-AAGCAT-AATAAG
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           395537 14 -  15254737 CA-AAGCAT-AATAAG
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2971271 14 +   6889770 CA-AAGCAT-AATAAG
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11516349 14 +  39901454 CA-AAGCAT-AATGAG
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   11367 14 +     87036 CA-AAGCAT-AATGAG
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11263010 14 -  35597290 CA-AAGCAT-AATGAG
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11085539 14 +  39895921 CA-AAGCAT-AATGAG
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16452563 14 -  44759192 CA-AAGCAT-AATGAG
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21323518 14 + 157394656 CA-AAGCAT-AATGAA
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135704745 14 - 157403528 CA-AAGCAT-AATGAA
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_1557951                  298 14 +       644 CG-TTTCAT-AATGAG
i Capromys_pilorides.CapPil_scaffold_1557951            C 0 I 7
s Carlito_syrichta.NW_007248099.1                          306835 14 +    345090 CA-AAGCAT-AATGAG
i Carlito_syrichta.NW_007248099.1                       C 0 I 6
s Carollia_perspicillata.CarPer_scaffold_4436               57782 12 +     67245 CG-AAGCAT-AATG--
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   28266 14 +     33760 CA-ATGCAT-AATGAG
i Castor_canadensis.CasCan_scaffold_47037               C 0 I 7
s Catagonus_wagneri.CatWag_scaffold_1305                   157077 14 -    276539 CA-AAGCAT-AATGAG
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15784439 14 -  24422027 CA-TTGCAT-AATGAG
i Cavia_aperea.AVPZ01000278.1                           C 0 I 7
s Cavia_porcellus.DS562889.1                             15796371 14 -  24440124 CA-TTGCAT-AATGAG
i Cavia_porcellus.DS562889.1                            C 0 I 7
s Cavia_tschudii.CavTsc_scaffold_488                       174562 14 +    436027 CA-TTGCAT-AATGAG
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 I 7
s Cebus_albifrons.Contig22                               18888455 14 -  29618158 CA-AAGCAT-AATGAG
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 5999 14 -     26817 CA-AAGCAT-AATGAG
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                10242 14 +     25043 CA-AAGCAT-AATGAG
i Cebus_unicolor.k141_239009                            C 0 I 722
s Cephalopachus_bancanus.k141_702587                         5871 14 +     21754 CA-AAGCAT-AATGAG
i Cephalopachus_bancanus.k141_702587                    C 0 I 6
s Ceratotherium_simum.JH767818.1                          4361557 14 +   7569818 CA-AAGCAT-AATGAG
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         1312 14 -      9338 CA-AAGCAT-AATGAG
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6552378 14 +   6739814 CA-AAGCAT-AATGAG
i Cercocebus_atys.KQ010443.1                            C 0 I 1237
s Cercocebus_chrysogaster.k141_2951608                      53855 14 -     54931 CA-AAGCAT-AATGAG
i Cercocebus_chrysogaster.k141_2951608                  C 0 I 47
s Cercocebus_lunulatus.k141_4634644                           297 14 -     21101 CA-AAGCAT-AATGAG
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         56370 14 -    107033 CA-AAGCAT-AATGAG
i Cercocebus_torquatus.k141_3969582                     C 0 I 1237
s Cercopithecus_ascanius.k141_4123525                         501 14 -     17608 CA-AAGCAT-AATGAG
i Cercopithecus_ascanius.k141_4123525                   I 44 C 0
s Cercopithecus_cephus.k141_598190                          27999 14 +     30494 CA-AAGCAT-AATGAG
i Cercopithecus_cephus.k141_598190                      I 1251 C 0
s Cercopithecus_diana.k141_2980617                          56842 14 -     59240 CA-AAGCAT-AATGAG
i Cercopithecus_diana.k141_2980617                      n 49 C 0
s Cercopithecus_hamlyni.k141_381099                          2664 14 -      3505 CA-AAGCAT-AATGAG
i Cercopithecus_hamlyni.k141_381099                     I 43 I 35
s Cercopithecus_lowei.k141_623764                           22701 14 +     35983 CA-AAGCAT-AATGAG
i Cercopithecus_lowei.k141_623764                       I 1247 C 0
s Cercopithecus_albogularis.ctg51                              11989232 14 +  12117833 CA-AAGCAT-AATGAG
i Cercopithecus_albogularis.ctg51                             I 1241 C 0
s Cercopithecus_mona.ctg12                               46475987 14 +  46592721 CA-AAGCAT-AATGAG
i Cercopithecus_mona.ctg12                              I 1243 C 0
s Cercopithecus_neglectus.k141_2078027                      39538 14 -     45581 CA-AAGCAT-AATGAG
i Cercopithecus_neglectus.k141_2078027                  n 61 C 0
s Cercopithecus_nictitans.k141_1129315                        547 14 +     35577 CA-AAGCAT-AATGAG
i Cercopithecus_nictitans.k141_1129315                  n 61 C 0
s Cercopithecus_petaurista.k141_64532                         320 14 -     25661 CA-AAGCAT-AATGAG
i Cercopithecus_petaurista.k141_64532                   n 61 C 0
s Cercopithecus_pogonias.k141_3109732                         298 14 -     17744 CA-AAGCAT-AATGAG
i Cercopithecus_pogonias.k141_3109732                   n 49 C 0
s Cercopithecus_roloway.k141_2263608                        19907 14 +     37128 CA-AAGCAT-AATGAG
i Cercopithecus_roloway.k141_2263608                    n 61 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_1070855          1136 14 -      1715 CA-AAGCAT-AATGAG
i Chaetophractus_vellerosus.ChaVel_scaffold_1070855     C 0 C 0
s Cheirogaleus_major.k141_1157592                           56766 14 -     68416 CA-AAGCAT-AATGAG
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            5808 14 +     13308 CA-AAGCAT-AATGAG
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             3272 14 -     18223 CA-AAGCAT-AATGAG
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             20295 14 +     25473 CA-AAGCAT-AATGAG
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           39334 14 +     57117 CA-AAGCAT-AATGAG
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          44009 14 +     54541 CA-AAGCAT-AATGAG
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15959604 14 +  43084221 AT-TCGCAT-AATGAA
i Chinchilla_lanigera.JH721867.1                        C 0 I 7
s Chiropotes_israelita.k141_1189915                         68825 13 +    196370 -A-AAGCAT-AATGAG
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          13005 13 +     40510 -A-AAGCAT-AATGAG
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15136205 14 -  15256731 CA-AAGCAT-AATGAG
i Chlorocebus_aethiops.ctg22                            C 0 I 1257
s Chlorocebus_pygerythrus.k141_1486215                      31251 14 -     53260 CA-AAGCAT-AATGAG
i Chlorocebus_pygerythrus.k141_1486215                  C 0 I 1258
s Chlorocebus_sabaeus.CM001963.2                        101141700 14 + 101219884 CA-AAGCAT-AATGAG
i Chlorocebus_sabaeus.CM001963.2                        C 0 I 1372
s Choloepus_didactylus.ChoDid_scaffold_36182                14736 14 -     21363 CA-AAGCAT-AATGAG
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           760047 14 +    964067 CA-AAGCAT-AATGAG
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_141308              6848 14 -     12508 CA-AAGCAT-AATGAG
i Chrysochloris_asiatica.ChrAsi_scaffold_141308         C 0 C 0
s Colobus_angolensis.KN985967.1                          10880279 14 +  10971483 CA-AAGCAT-AATGAG
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147661437 14 + 156195979 CA-AAGCAT-AATGAG
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            13424 14 +     23629 CA-AAGCAT-AATGAG
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60611037 14 +  78930452 CA-AAGCAT-AATGAG
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         37495 14 -     40477 CA-AGGCAT-AATGAG
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 275317 14 -    399297 CA-AAGCAT-AATGGC
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 I 7
s Cricetulus_griseus.LT883672.1                          53026849 14 +  72327488 CA-AAACAT-AATGGC
i Cricetulus_griseus.LT883672.1                         C 0 I 7
s Crocidura_indochinensis.CroInd_scaffold_38409             17972 14 -     19186 CA-AAGCAT-AATGAA
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            49657 14 -     70449 CA-AAGCAT-AATGAG
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  206022  7 -    956709 CC-AAGCA--------
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 I 6
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 28383 14 -     67205 CA-TTGCAT-AATGAG
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 I 7
s Cuniculus_paca.CunPac_flattened_line_16637                15211 14 +     26546 CA-TTGTAT-AATGAG
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 I 7
s Dasyprocta_punctata.DasPun_flattened_line_634             56694 14 -    236241 CA-TTGCAT-AATGAG
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 I 7
s Dasypus_novemcinctus.JH568778.1                          179946 14 -   6883506 CG-AAGCAT-AATGAG
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16842634 14 +  31942871 CA-AAGCAT-AATGAG
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80035115 14 -  96802777 CA-AAGCAT-AATGAG
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18697092 12 -  18957592 CG-AAGCAC-AGAG--
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 320216 14 +    993696 CA-AAGCAT-AATGAG
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                    858 15 +    151128 CA-AAGCATTAATGAG
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   155489 14 +    228994 CA-TCACAT-AATGAG
i Dinomys_branickii.DinBra_scaffold_1996                C 0 I 7
s Dipodomys_ordii.KN672545.1                              3653238 14 +   4240102 CA-AAGAAT-AATGAG
i Dipodomys_ordii.KN672545.1                            C 0 I 5
s Dipodomys_stephensi.DipSte_scaffold_44365                 24795 14 +     28912 CA-AAGAAT-AATGAG
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 I 5
s Dolichotis_patagonum.DolPat_scaffold_14102                33955 14 -     73477 CA-TTGCAT-AATGAG
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 I 7
s Eidolon_helvum.KE772537.1                                 10462 14 +     24177 CA-AAGCAT-AATGAG
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1489776 14 +   1727528 CT-AAGCAT-AATGAA
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7804527 14 +  15467074 CA-AAGCAT-AATGAG
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        237507 14 -    369425 CA-ACGCAT-AATGGC
i Ellobius_lutescens.LOEQ01003611.1                     C 0 I 7
s Ellobius_talpinus.LOJH01090055.1                           4520 14 -      7838 CA-ACACAT-AATGGC
i Ellobius_talpinus.LOJH01090055.1                      C 0 I 7
s Enhydra_lutris.KZ291749.1                              85869422 14 +  99434291 CA-AAGCAT-AATGAG
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4702051 14 +   6522550 CA-AAGCAT-AATAAG
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5850950 14 -   7175178 CA-AAGCAT-AATGAG
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13349452 14 +  41866177 CA-AAGCAT-AATGAG
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          10942 14 +     92910 CA-AAGCAT-AATGAG
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11530739 14 +  16010500 CA-AAGCAT-AATAAG
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48768383 14 -  48907691 CA-AAGCAT-AATGAG
i Erythrocebus_patas.Contig8                            C 0 I 1259
s Eschrichtius_robustus.EscRob_flattened_line_685          313317 14 +    330699 CA-AAGCAT-AATGAG
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             59747 14 +     89355 CA-AAGCAT-AATGAG
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              2813 14 +     13586 CA-AAGCAT-AATGAG
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               2748 14 -      6809 CA-AAGCAT-AATGAG
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             9224 14 +     36558 CA-AAGCAT-AATGAG
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             5538 14 +     60246 CA-AAGCAT-AATGAG
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 9021 14 +    109717 CA-AAGCAT-AATGAG
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               13400 14 +     16540 CA-AAGCAT-AATGAG
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                13676 14 +     27497 CA-AAGCAT-AATGAG
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           16142 14 +     26808 CA-AAGCAT-AATGAG
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                30866 14 +     46535 CA-AAGCAT-AATGAG
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              13589 14 -     29447 CA-AAGCAT-AATGAG
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129890621 14 - 159252932 CA-AAGCAT-AATGAG
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129277696 14 - 158578461 CA-AAGCAT-AATGAG
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 18831 14 +     52776 CA-AAGCAT-AATGAG
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13890560 13 -  19261668 CA-TCGCAT-AATGA-
i Fukomys_damarensis.KN123630.1                         C 0 I 3
s Galago_moholi.ctg555                                     208732 14 -    847004 CC-AAGCAT-AATGAA
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           11113 14 -     43889 CC-AAGCAT-AATGAA
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           8177 14 +     27357 CC-AAGCAT-AATGAA
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               154091 14 +    324696 CA-AAGCTT-AATGAG
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    179291 14 -    189561 CA-AAGCAT-AATGAA
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           10498 14 -     18683 CA-AAGTAT-AATGAG
i Glis_glis.GliGli_scaffold_79770                       C 0 I 7
s Gorilla_beringei.k141_111300                               3713 14 -     14630 CA-AAGCAT-AATGAG
i Gorilla_beringei.k141_111300                          I 742 T 742
s Gorilla_gorilla.LT578340.1                            119650812 14 - 195582420 CA-AAGCAT-AATGAG
i Gorilla_gorilla.LT578340.1                            I 742 T 742
s Graphiurus_murinus.GraMur_scaffold_4493                   75027 14 +    118900 CA-AAGCAT-AATGAG
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 I 7
s Hapalemur_alaotrensis.k141_1198205                         3373 14 +      3980 CA-AAGCAT-AATGAG
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             25848 14 +     26611 CA-AAGCAT-AATGAG
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             3310 14 +     56096 CA-AAGCAT-AATGAG
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        26585 14 -     42470 CA-AAGCAT-AATGAG
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        43179 14 -     54384 CA-AAGCAT-AATGAG
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              14866 14 +     53719 CA-AAGCAT-AATGAG
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                25790 14 -     91191 CA-AAGCAT-AATGAA
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2548941 14 +  31725842 CA-TCACAT-AATGAG
i Heterocephalus_glaber.JH602058.1                      C 0 I 5
s Heterohyrax_brucei.HetBruBak_scaffold_25354               54344 14 +     73687 CA-AAGCAT-AATGAT
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              145355 14 +    277961 CA-AAGCAT-AATGAG
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      276694 14 -    477199 CA-AAGCAT-AATGAG
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              5852 14 -      9143 CA-AAGCAT-AATGAG
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg649                                    99651 14 +    115816 CA-AAGCAT-AATGAG
i Hoolock_leuconedys.ctg649                                T 447 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 13920 14 -     67322 CA-AAGCAT-AATGAG
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16856 14 -    119109 CA-TTGCAT-AATGAG
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 I 7
s Hylobates_abbotti.k141_493872                              2788 14 +      5897 CA-AAGCAT-AATGAG
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_1485652                              1209 14 -      1697 CA-AAGCAT-AATGAG
i Hylobates_agilis.k141_1485652                         C 0 C 0
s Hylobates_klossii.k141_466549                              9233 14 +     11537 CA-AAGCGT-AATGAG
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14622334 14 -  25970782 CA-AAGCAT-AATGAG
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1133650                            2223 14 -      2775 CA-AAGCAT-AATGAG
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             30826 14 -     60944 CA-AAGCAT-AATGAG
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     3991 14 +     22540 CA-TCGCAT-AATGAG
i Hystrix_cristata.HysCri_scaffold_50788                C 0 I 5
s Ictidomys_tridecemlineatus.JH393315.1                   7123856 14 +  13083262 CA-AAGCAT-AATGAG
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 I 7
s Indri_indri.k141_1884019                                   1049 14 -      2196 CA-AAGCAT-AATGAG
i Indri_indri.k141_1884019                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               7104 14 +     17520 CA-AAGCAT-AATGAG
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8563399 14 +  11848649 CG-AAGCAT-AATGAG
i Jaculus_jaculus.JH725517.1                            C 0 I 5
s Kogia_breviceps.KogBre_flattened_line_35920               21933 12 +     37189 CA-AAGCAT-AATG--
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          48550 14 -    147782 CA-AAGCAT-AATGAG
i Lagothrix_lagothricha.k141_12968                      I 717 T 717
s Lasiurus_borealis.LasBor_scaffold_5102                   111845 14 -    115756 CA-AAGCAT-AATAAG
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258404868 14 - 285822530 CG-AAGCAT-AATGAG
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        21740 14 +     39228 CA-AAGCAT-AATGAG
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            51113 14 +     63517 CA-AAGCAT-AATGAG
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        76355 14 +    116806 CA-AAACAT-AATGAG
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     29378 14 -     33031 CA-AAGCAT-AATGAG
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3083634 14 -   3498232 CA-AAGCAT-AATGAG
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    10844 14 +     22452 CA-GAGCAT-AATGAA
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            134262 14 +   3060487 CA-AAGCAT-AATGAG
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19245466 14 +  19376315 CA-AAGCAT-AATGAG
i Lophocebus_aterrimus.ctg55                            C 0 I 1238
s Loris_lydekkerianus.k141_550999                            8480 14 +     84689 CC-AAGCAT-AATGAA
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3776231 14 +   6799190 CC-AAGCAT-AATGAA
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20589121 14 -  62548349 CA-AAGCAT-AATGAG
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11084995 14 +  39895028 CA-AAGCAT-AATGAG
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             17152 14 +     74745 CA-AAGCAT-AATGAG
i Macaca_arctoides.k141_2201161                         C 0 I 1241
s Macaca_assamensis.Contig65                             12703658 14 +  12821369 CA-AAGCAT-AATGAG
i Macaca_assamensis.Contig65                            C 0 I 1252
s Macaca_cyclopis.k119_893486                                 555 14 -      3136 CA-AAGCAT-AATGAG
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           44056 14 +     63263 CA-AAGCAT-AATGAG
i Macaca_fascicularis.k141_155037                       C 0 I 1250
s Macaca_fuscata.k119_1068107                               12632 14 +     12679 CA-AAGCAT-AATGAG
i Macaca_fuscata.k119_1068107                           C 0 n 0
s Macaca_leonina.k141_3421209                                2205 14 +      3017 CA-AAGCAT-AATGAG
i Macaca_leonina.k141_3421209                           C 0 I 35
s Macaca_maura.k141_251854                                  43817 14 -     79256 CA-AAGCAT-AATGAG
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196032735 14 + 196197964 CA-AAGCAT-AATGAG
i Macaca_mulatta.NC_041755.1                            C 0 I 1252
s Macaca_nemestrina.KQ004885.1                           11442841 14 +  11645122 CA-AAGCAT-AATGAG
i Macaca_nemestrina.KQ004885.1                          C 0 I 1251
s Macaca_nigra.k141_282495                                   2764 14 -     46448 CA-AAGCAT-AATGAG
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                2595 14 -      3617 CA-AAGCAT-AATGAG
i Macaca_radiata.k141_1580474                           C 0 I 35
s Macaca_siberu.k141_741907                                 12927 14 -     55006 CA-AAGCAT-AATGAG
i Macaca_siberu.k141_741907                             C 0 I 1251
s Macaca_silenus.Contig12                                43837964 14 +  43892939 CA-AAGCAT-AATGAG
i Macaca_silenus.Contig12                               C 0 I 1251
s Macaca_thibetana.k99_662710                               15465 14 -     24607 CA-AAGCAT-AATGAG
i Macaca_thibetana.k99_662710                           I 44 C 0
s Macaca_tonkeana.k141_2870633                               2769 14 -     27140 CA-AAGCAT-AATGAG
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                699880 14 +    802869 CA-AAGCAT-AATGAG
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43434626 14 -  43563597 CA-AAGCAT-AATGAG
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4447452 14 -   4543643 CA-AAGCAT-AATGAG
i Mandrillus_sphinx.Contig144                           C 0 I 1239
s Manis_javanica.JSZB01003966.1                            144372 13 +    252755 CA--AGCAT-AATGAG
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             34446 13 +     58827 CA--AGCAT-AACGAG
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36871696 14 +  64221397 CA-AAGCAT-AATGAG
i Marmota_marmota.CZRN01000005.1                        C 0 I 7
s Megaderma_lyra.MegLyr_scaffold_3562                       62535 14 -    234502 CA-AAACAT-AATGAG
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_146202             233 14 -      1999 CA-AAGCAT-AATGAG
i Mellivora_capensis.MelCap_flattened_line_146202       I 40 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233                9806 14 +     15977 CA-AAGCAT-CATGGC
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 I 7
s Mesocricetus_auratus.KB708139.1                         1044589 14 -  26018355 CA-AAACAT-AATGGC
i Mesocricetus_auratus.KB708139.1                       C 0 I 7
s Mesoplodon_bidens.MesBid_scaffold_183284                   1974 14 +      2166 CA-AAGCAT-AATGAG
i Mesoplodon_bidens.MesBid_scaffold_183284              C 0 C 0
s Microcebus_murinus.CM007691.1                          16507988 14 +  47401472 CA-AAGCAT-AATGAG
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  29265 13 -     48017 CA-AAGCAT-AATGA-
i Microgale_talazaci.MicTal_scaffold_34660              C 0 I 8
s Micronycteris_hirsuta.MicHir_scaffold_37978               20959 12 -     32043 CG-AAGCAT-AATG--
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22817707 14 -  98408828 CA-AAGCAT-AATGAC
i Microtus_ochrogaster.CM001673.1                       C 0 I 7
s Miniopterus_natalensis.LDJU01000022.1                   8207720 11 +  10048721 CA----CAT-AATGAG
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            32391 11 +     45743 CG----CAT-AATGAG
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        33285 14 +     34273 CA-AAGCAT-AATGAG
i Miopithecus_ogouensis.k141_2666161                    C 0 I 35
s Mirounga_angustirostris.MirAng_flattened_line_8852         8939 14 -    104932 CA-AAGCAT-AATGAG
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     3393 14 +      8497 CA-AAGCAT-AATGAG
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 144699 14 +    154973 CA-AAGCAT-AATGAG
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                159469 12 +    265003 CG-AAGCAT-AATG--
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 2878 14 -      4346 CA-AAGCAT-AATGAA
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  142561 14 -    168139 CA-AAGCAT-AATGAG
i Mungos_mungo.MunMun_flattened_line_8729               C 0 I 5
s Murina_feae.MurFea_scaffold_2254                          17361 14 -    100666 CA-AAGCAT-AATAAG
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70764220 14 +  92629107 CA-AAGCAT-AATGGC
i Mus_caroli.LT608236.1                                 C 0 I 7
s Mus_musculus.chr16                                     75487257 14 +  98207768 CA-AAGCAT-AATGGC
i Mus_musculus.chr16                                    C 0 I 7
s Mus_pahari.LT608305.1                                  67553428 14 +  89017189 CA-AAGCAT-AATGGC
i Mus_pahari.LT608305.1                                 C 0 I 7
s Mus_spretus.CM004110.1                                 74328438 14 +  97876770 CA-AAGCAT-AATGGC
i Mus_spretus.CM004110.1                                C 0 I 7
s Muscardinus_avellanarius.MusAve_scaffold_9643              8981 14 +     98495 CA-AAGCAT-AATGAG
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 I 7
s Mustela_putorius.JH417978.1                             4421804 14 -  28371801 CA-AAGCAT-AATGAG
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     87933 14 -    117718 CA-CTGCGT-GATGAG
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 I 7
s Myotis_brandtii.KE161952.1                               965681 14 +   8389877 CA-AAGCAT-AATAAG
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5017372 14 +   6462685 CA-AAGCAT-AATAAG
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3463268 14 -   3747815 CA-AAGCAT-AATAAG
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         8463 14 +     66751 CA-AAGCAT-AATAAG
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3338 14 -      8794 CA-AAACAT-AATGAG
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            108316 14 +    362372 CA-AACCAT-AATGGG
i Nannospalax_galili.KL201303.1                         C 0 I 7
s Nasalis_larvatus.k141_153429                               5664 14 +     48152 CA-AAGCAT-AATGAG
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4482538 14 -  14209539 CA-AAGCAT-AATGAG
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3949311 14 -   4490290 CA-AAGCAT-AATGAG
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  47586 12 +     94413 TG-AAGCAT-AATA--
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1439838                           1272 14 +      3718 CA-AAGCAT-AATGAG
i Nomascus_annamensis.k141_1439838                      I 780 T 736
s Nomascus_concolor.k141_49591                               1495 14 +      2014 CA-AAGCAT-AATGAG
i Nomascus_concolor.k141_49591                          C 0 T 736
s Nomascus_gabriellae.k141_642452                             420 14 +      2851 CA-AAGCAT-AATGAG
i Nomascus_gabriellae.k141_642452                       C 0 I 42
s Nomascus_siki_b.tarseq_80                             23335 14 -  18771707 CA-AAGCAT-AATGAG
i Nomascus_siki_b.tarseq_80                         C 0 T 737
s Nomascus_siki_a.k141_595747                                  1048 14 +      4512 CA-AAGCAT-AATGAG
i Nomascus_siki_a.k141_595747                             C 0 T 736
s Nyctereutes_procyonoides.CAJHUB010000786.1                27988 14 +   3668941 CA-AAGCAT-AATGAG
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65564826 14 -  95554990 CC-AAGCAT-AATGAA
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            1671 14 +      6470 CC-AAGCAT-AATGAA
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65667196 14 +  89412551 CC-AAGCAT-AATGAA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4993819 14 -  23139505 CA-AAGAAT-AATGAA
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3683405 14 +  10294119 CC-TTGCAT-AATGAG
i Octodon_degus.JH651621.1                              C 0 I 7
s Odobenus_rosmarus.KB229369.1                             677194 14 -   3126709 CA-AAGCAT-AATGAG
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1078006 14 +   1425656 CT-AAGCAT-AATGAA
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         35161 14 +     78940 CA-AAGCAT-AATGAA
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  122982 14 +    145789 CA-AAGCAT-AATGGC
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 I 7
s Onychomys_torridus.OnyTor_scaffold_12578                  34737 14 +     62360 CA-AAGCAT-AATGGC
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 I 7
s Orcinus_orca.KB316965.1                                 7222995 14 -   7562323 CA-AAGCAT-AATGAG
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              41377 14 -     66828 CA-AAGCAT-AATGAG
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141873502 14 + 163896628 CA-GAGCAT-AATGAA
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      305327 14 -    505867 CA-AAGCAT-AATGAG
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       36820 14 +     38679 CC-AAGCAT-AATGAA
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18006262 14 -  38779656 CC-AAGCAT-AATGAA
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134075583 14 - 275406953 CA-AAGCAT-AATGAA
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      76797 14 +    140051 CA-AAGCAT-AATGAA
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127573057 14 - 205426864 CA-AAGCAT-AATGAG
i Pan_paniscus.CM003386.1                               I 742 T 742
s Pan_troglodytes.CM009241.2                            120150210 14 - 196562556 CA-AAGCAT-AATGAG
i Pan_troglodytes.CM009241.2                            I 742 T 742
s Panthera_onca.PanOnc_flattened_line_1615                  32022 14 +    295523 CA-AAGCAT-AATGAG
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3635755 14 +  18214204 CA-AAGCAT-AATGAG
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5025403 14 -   6340057 CA-AAGCAT-AATGAG
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1064444 14 -   1292953 CA-AAGCAT-AATGAA
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188153410 14 - 188283584 CA-AAGCAT-AATGAG
i Papio_anubis.CM001492.2                               C 0 I 1243
s Papio_cynocephalus.k141_883042                             2971 14 +      5367 CA-AAGCAT-AATGAG
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47510807 14 +  47705337 CA-AAGCAT-AATGAG
i Papio_hamadryas.Contig15                              C 0 I 1235
s Papio_kindae.k141_5458022                                 64784 14 -    104429 CA-AAGCAT-AATGAG
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    4552 14 +     14967 CA-AAGCAT-AATGAG
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_3762866                                34978 14 +     35859 CA-AAGCAT-AATGAG
i Papio_ursinus.k141_3762866                            C 0 I 35
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113322 14 -    135482 CA-AAGCAT-AATGAG
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           2873 14 -     23713 CC-AAGCAT-AATAAA
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            22172 14 -     27972 CC-AAGCAT-AATAAA
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      40791 14 -     45160 CA-AAGCAT-AATGAG
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 I 5
s Peromyscus_maniculatus.KI615518.1                       4947913 14 -   8017169 CA-GAGCAT-AATGGC
i Peromyscus_maniculatus.KI615518.1                     C 0 I 7
s Petromus_typicus.PetTyp_scaffold_33007                    10102 14 -     36578 CA-TGGCAT-AATGAG
i Petromus_typicus.PetTyp_scaffold_33007                C 0 I 3
s Phocoena_phocoena.PhoPho_flattened_line_11948            119612 14 -    122454 CA-AAGCAT-AATGAG
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           2668 14 -      3310 CA-AAGCAT-AATGAG
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       1060 14 -     17985 CA-AAGCAT-AATGAG
i Piliocolobus_gordonorum.k141_1270531                  I 578 I 46
s Piliocolobus_kirkii.k141_929665                             427 14 +      7694 CA-AAGCAT-AATGAG
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26737334 14 +  26888534 CA-AAGCAT-AATGAG
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            95132 14 +    112873 CA-AAGCAT-AATAAG
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             41317 13 -     61926 -A-AAGCAT-AATGAG
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        22746 13 +     78826 -A-AAGCAT-AATGAG
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              6697 13 -     15800 -A-AAGCAT-AATGAG
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                         9895 13 -     16101 -A-AAGCAT-AATGAG
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          3204 13 +      9673 -A-AAGCAT-AATGAG
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13472198 13 -  19735023 -A-AAGCAT-AATGAG
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           11106 13 -     31692 -A-AAGCAT-AATGAG
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           3680 14 +     21690 CA-AAGCAT-AATGAG
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       20537 14 +     44506 CA-AAGCAT-AATGAG
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        20747 14 +     67491 CA-AAGCAT-AATGAG
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      10988 14 -     98129 CA-AAGCAT-AATGAG
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     20593 14 +    147771 CA-AAGCAT-AATGAG
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        20843 14 -     23762 CA-AAGCAT-AATGAG
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          1309 14 -     55515 CA-AAGCAT-AATGAG
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         20662 14 +    152463 CA-AAGCAT-AATGAG
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      7422 14 +      8943 CA-AAGCAT-AATGAG
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                         10382 14 +    134592 CA-AAGCAT-AATGAG
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          20972 14 -     75465 CA-AAGCAT-AATGAG
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              184860 14 -    373494 CA-AAGCAT-AATGAG
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19804767 14 +  19899266 CA-AAGCAT-AATGAG
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               2902 14 -     15069 CA-AAGCAT-AATGAG
i Presbytis_comata.k141_672698                          C 0 I 1260
s Presbytis_mitrata.k141_860013                              3036 14 +     14865 CA-AAGCAT-AATGAG
i Presbytis_mitrata.k141_860013                         C 0 I 1260
s Procavia_capensis.ProCapCap_scaffold_15315                74208 14 +     78963 CA-AAGCAT-AATGAT
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6846244 14 +  12164890 CA-AAGCAT-AATGAG
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    664861 14 -   2312742 NN-NNNNNN-NNNNNN
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         1388 14 +     11805 CA-AAGCAT-AATGAG
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           40722 14 +     52369 CA-AAGCAT-AATGAG
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         33111 14 -     44753 CA-AAGCAT-AATGAG
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            15032 14 +     27322 CA-AAGCAT-AATGAG
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       14671 14 -     53241 CA-AAGCAT-AATGAG
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         36943 14 -     48185 CA-AAGCAT-AATGAG
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           31345 14 +     77221 CG-AAGCAT-CATGGC
i Psammomys_obesus.NESX01026517.1                       C 0 I 7
s Pteronotus_parnellii.KE867983.1                            2140 12 -     27784 TG-AAGCAT-AATG--
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        243897 14 -    344369 CA-AAGCAT-AATGAG
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13244260 14 -  17261082 CA-AAGCAT-AATGAG
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             602211 14 -   3946241 CA-AAGCAT-AATGAG
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131531985 14 - 161321710 CA-AAGCAT-AATGAG
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             27031 14 +     56732 CA-AAGCAT-AATGAG
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6803522 14 +   6970761 CA-AAGCAT-AATGAG
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             2915 14 +     18040 CA-AAGCAT-AATGAG
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                14084 14 +     68503 CT-AAGCAT-AATGAA
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13913321 14 +  90463843 CA-AAGCAT-AATGGC
i Rattus_norvegicus.chr11                               C 0 I 7
s Rhinolophus_sinicus.LVEH01000179.1                      1786081 14 +   2252614 CA-AAGCAT-AATGAG
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           13468 14 -     14454 CA-AAGCAT-AATGAG
i Rhinopithecus_bieti.k119_102124                       C 0 I 35
s Rhinopithecus_roxellana.NC_044549.1                   206374794 14 - 206558726 CA-AAGCAT-AATGAG
i Rhinopithecus_roxellana.NC_044549.1                   C 0 I 1256
s Rhinopithecus_strykeri.ctg4                            44853694 14 -  45163003 CA-AAGCAT-AATGAG
i Rhinopithecus_strykeri.ctg4                           I 1252 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                17553 14 +    109198 CA-AAGCAT-AATGAG
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       5890 14 +     12214 CA-AAGCAT-AATGAA
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15671135 14 -  43202129 CA-AAGCAT-AATGAG
i Saimiri_boliviensis.NW_024100938.1                    I 703 T 703
s Saimiri_cassiquiarensis.k141_808270                        3001 14 +     34089 CA-AAGCAT-AATGAG
i Saimiri_cassiquiarensis.k141_808270                   I 703 T 703
s Saimiri_macrodon.k141_2087127                              2942 14 -     60842 CA-AAGCAT-AATGAG
i Saimiri_macrodon.k141_2087127                         I 703 T 703
s Saimiri_oerstedii.k141_841116                              3037 14 +     67014 CA-AAGCAT-AATGAG
i Saimiri_oerstedii.k141_841116                         I 703 T 703
s Saimiri_sciureus.k141_1947592                              3015 14 +     60816 CA-AAGCAT-AATGAG
i Saimiri_sciureus.k141_1947592                         I 703 C 0
s Saimiri_ustus.k141_1282476                                 2952 14 -     76454 CA-AAGCAT-AATGAG
i Saimiri_ustus.k141_1282476                            I 703 T 703
s Sapajus_apella.ctg10                                   17338983 14 -  30362882 CA-AAGCAT-AATGAG
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         18358 14 -     62485 CA-AAGCAT-AATGAG
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   29643 14 -    114521 CA-AAGCAT-AATGAG
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1527475                       25456 14 +     26421 CA-AAGCAT-AATGAG
i Semnopithecus_entellus.k141_1527475                   C 0 I 35
s Semnopithecus_hypoleucos.k141_761524                       5916 14 +     20762 CA-AAGCAT-AATGAG
i Semnopithecus_hypoleucos.k141_761524                  C 0 I 1258
s Semnopithecus_johnii.k141_1351450                         39651 14 +     40653 CA-AAGCAT-AATGAG
i Semnopithecus_johnii.k141_1351450                     C 0 I 35
s Semnopithecus_priam.k141_410937                           35963 14 +     46263 CA-AAGCAT-AATGAG
i Semnopithecus_priam.k141_410937                       n 61 C 0
s Semnopithecus_schistaceus.k141_387461                     29078 14 +     42640 CA-AAGCAT-AATGAG
i Semnopithecus_schistaceus.k141_387461                 n 61 C 0
s Semnopithecus_vetulus.k141_642050                         32649 14 -     33692 CA-AAGCAT-AATGAG
i Semnopithecus_vetulus.k141_642050                     C 0 I 35
s Sigmodon_hispidus.SigHis_scaffold_11332                   97534 14 -    120886 CA-AAGCAT-AATGGC
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 I 7
s Solenodon_paradoxus.SolPar_flattened_line_1012            16282 14 +    739146 CA-AAGCAT-AATGAG
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17748497 14 -  27805282 CA-AAGTGT-ACTGAA
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2237772 14 +   2842873 TA-AAGCAT-AATGAG
i Spermophilus_dauricus.KZ294190.1                      C 0 I 7
s Spilogale_gracilis.SpiGra_flattened_line_905             232663 14 -    276980 CA-AAGCAT-AATGAG
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 I 3
s Suricata_suricatta.SurSur_flattened_line_20339            25225 14 +     62062 CA-AAGCAT-AATGAG
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189270134 14 + 218635234 CA-AAGCAT-AATGAG
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                     13899923 14 +  13920577 CA-AAGCAT-AATGAG
i Symphalangus_syndactylus.tarseq_24                    I 44 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               4080 14 -      6213 CA-AAGGAT-AATGAG
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 I 35
s Tamandua_tetradactyla.TamTet_scaffold_26877               13012 14 +     45698 CA-AAACAT-AATGAG
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      805001 14 +   1148477 CA-AAGCAT-AATGAG
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  55662 14 +     99546 CA-AAGCAT-AATGAG
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               24318 14 +     42269 CA-AAGCAT-AATGAG
i Tarsius_lariang.k141_609102                           C 0 I 6
s Tarsius_wallacei.k141_48636                               57634 14 +     65473 CA-AAGCAT-AATGAG
i Tarsius_wallacei.k141_48636                           C 0 I 6
s Theropithecus_gelada.CM009951.1                       194004946 14 - 194193292 CA-AAGCAT-AATGAG
i Theropithecus_gelada.CM009951.1                       C 0 I 1235
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             37167 14 -     47444 CA-TCATGT-AATGAG
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 I 7
s Tolypeutes_matacus.TolMat_scaffold_269431                  1896 14 +      6782 CA-AAGCAT-AATGAG
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  134150 12 -    259118 CA-AAGCAT-AATG--
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        24026 14 +     38948 CA-AAGCAT-AATGAG
i Trachypithecus_auratus.k141_738098                    C 0 I 1258
s Trachypithecus_crepusculus.k141_1588528                   17753 14 -     32910 CA-AAGCAT-AATGAG
i Trachypithecus_crepusculus.k141_1588528               C 0 I 1258
s Trachypithecus_cristatus.k141_27198                       23651 14 +     24652 CA-AAGCAT-AATGAG
i Trachypithecus_cristatus.k141_27198                   C 0 I 35
s Trachypithecus_francoisi.k141_1178450                      2529 14 -      3559 CA-AAGCAT-AATGAG
i Trachypithecus_francoisi.k141_1178450                 C 0 I 35
s Trachypithecus_geei.k141_670367                           40475 14 -     54611 CA-AAGCAT-AATGAG
i Trachypithecus_geei.k141_670367                       C 0 I 1256
s Trachypithecus_germaini.k141_878600                         561 14 +      1165 CA-AAGCAT-AATGAG
i Trachypithecus_germaini.k141_878600                   I 44 C 0
s Trachypithecus_hatinhensis.k141_504423                     1709 14 -     15592 CA-AAGCAT-AATGAG
i Trachypithecus_hatinhensis.k141_504423                n 61 C 0
s Trachypithecus_laotum.k141_760702                           366 14 +     14371 CA-AAGCAT-AATGAG
i Trachypithecus_laotum.k141_760702                     n 61 C 0
s Trachypithecus_leucocephalus.k141_283605                  48865 14 +     51589 CA-AAGCAT-AATGAG
i Trachypithecus_leucocephalus.k141_283605              C 0 I 1258
s Trachypithecus_melamera.k141_238507                       12041 14 +     14732 CA-AAGCAT-AATGAG
i Trachypithecus_melamera.k141_238507                   C 0 I 1258
s Trachypithecus_obscurus.k141_1115109                       2518 14 -     28054 CA-AAGCAT-AATGAG
i Trachypithecus_obscurus.k141_1115109                  C 0 I 1258
s Trachypithecus_phayrei.ctg3                            44657313 14 -  44834318 CA-AAGCAT-AATGAG
i Trachypithecus_phayrei.ctg3                           C 0 I 1258
s Trachypithecus_pileatus.k141_1022309                        874 14 +     13828 CA-AAGCAT-AATGAG
i Trachypithecus_pileatus.k141_1022309                  n 49 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   3490 14 +     90398 CA-AAGCAT-AATGAA
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16079585 14 +  31416278 CA-AAGCAT-AATGAG
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2789988 15 -   3938065 GGGGGGCAT-AATGAG
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    2508 15 +     13056 CGGGGGCAT-AATGAG
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69311714 14 -  96451834 CA-AAGCAT-AATGAG
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 24831 14 -     25548 CA-AAGCAT-AATGAG
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6512451 14 +  28682327 CA-AAGCAT-AATGAG
i Ursus_maritimus.KK498671.1                            C 0 I 5
s Varecia_rubra.k141_432109                                  3085 14 -     20643 CA-AAGCAT-AATGAG
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             22629 14 -     33872 CA-AAGCAT-AATGAG
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1522943 14 -   2331223 CA-AAGCAT-AATAAG
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                135395 14 -    281493 CA-AAGCAT-AATGAG
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       124870 14 -    134049 CA-AAGCAT-AATGAG
i Xerus_inauris.XerIna_scaffold_7898                    C 0 I 7
s Zalophus_californianus.ZalCal_flattened_line_4097        211924 14 -    227762 CA-AAGCAT-AATGAG
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     13109 14 -     20485 CG-AAGAAT-AATGAG
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 I 5
s Ziphius_cavirostris.ZipCav_flattened_line_127025           5210 14 -      8775 CA-AAGCAT-AATGAG
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Echinops_telfairi.JH980316.1                           22994071  0 -  44670279 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               10328 35 +    209709 ga--gatttttatac----actgcagattt-a--gaact--ga-att
s Acinonyx_jubatus.LLWD01000356.1                         2031659 35 +   3721120 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACG--GA-CTT
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    110249 28 -    189883 ---------TGATAG----TCCACAGATTG-A--GGATG--GA-ATT
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 7 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10654984 28 +  23371972 ---------TGATAC----ACTGCAGATTT-A--GAACT--GA-CTT
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 5 C 0
s Ailurus_fulgens.LNAC01000003.1                          7091704 35 -  16596857 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-CTT
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   10678 28 -     22067 ---------AGATAC----GCTACACATTT-A--GAACT--TG-GTC
i Allactaga_bullata.AllBul_scaffold_70162               I 5 C 0
s Allenopithecus_nigroviridis.k141_3103728                    930 35 +      1665 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Allenopithecus_nigroviridis.k141_3103728              I 645 I 7
s Allochrocebus_lhoesti.k141_3566948                          416 35 -     29318 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GAT
i Allochrocebus_lhoesti.k141_3566948                    n 35 I 11
s Allochrocebus_preussi.k141_21674                            633 35 -      1421 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Allochrocebus_preussi.k141_21674                      n 35 I 11
s Allochrocebus_solatus.k141_371672                           310 35 -     80423 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Allochrocebus_solatus.k141_371672                     n 35 I 11
s Alouatta_belzebul.k141_1818029                             7881 35 -     18050 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Alouatta_belzebul.k141_1818029                        T 714 C 0
s Alouatta_caraya.k141_5460                                  8994 35 -     11521 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Alouatta_caraya.k141_5460                             T 714 C 0
s Alouatta_discolor.k141_811576                              8558 35 -     21359 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Alouatta_discolor.k141_811576                         T 714 C 0
s Alouatta_juara.k141_1856473                                6935 35 +      7227 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Alouatta_juara.k141_1856473                           I 14 I 12
s Alouatta_macconnelli.k141_1331706                          7849 35 -     10438 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Alouatta_macconnelli.k141_1331706                     T 714 C 0
s Alouatta_nigerrima.k141_2718643                            4505 35 +      7047 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             8504 35 +     10410 GA--AATTTTGATAC----ACTGCAGATTT-A--GGACT--GA-GTT
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            1594 35 -      4927 GA--GACTTTGATAC----ACAGCAGATTT-A--GAACT--GA-GTT
i Alouatta_puruensis.k141_1284840                       T 714 C 0
s Alouatta_seniculus.k141_990213                             4524 35 +      6429 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Alouatta_seniculus.k141_990213                        T 714 C 0
s Ammotragus_lervia.NIVO01013474.1                        3518428 35 +   4113121 GA--GACTTTGATAC----ACTGCAGATTT-A--GAAAT--GA-CTT
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      388600 34 -    631301 -A--GACTTTGATAC----ACTGCCGATTT-A--GAATT--GA-CTT
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            29028 35 +     33004 GA--GACTTTGATAC----ACTGCAGATTT-A--GAAAT--GA-CTT
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 60244 35 +     78111 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            3182 35 +     22701 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5747140 35 +   9889416 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             3725 35 -    104377 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               3731 35 +     23246 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     1754 28 +      5067 ---------TGATAT----GCTAAAGATTT-A--GAATG--GA-GTT
i Aplodontia_rufa.AprRuf_scaffold_156013                I 7 C 0
s Arctocebus_calabarensis.k141_1161114                      15694 35 +     17483 GA--GACTTGGATAC----ACTGTAGATTC-A--GAACT--GA-GAT
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 6995 34 -     29036 -A--GACTTTGATAC----ACTGCCGATGT-A--GAACT--GA-CTT
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9536993 35 +  39197703 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Ateles_geoffroyi_b.tarseq_2582                           T 702 C 0
s Ateles_belzebuth.k141_1348307                             58277 35 +     85812 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Ateles_belzebuth.k141_1348307                         T 702 C 0
s Ateles_chamek.k141_1072810                                 9276 35 +     89302 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Ateles_chamek.k141_1072810                            T 702 C 0
s Ateles_geoffroyi_a.k141_1300742                             13781 35 -     58268 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Ateles_geoffroyi_a.k141_1300742                         T 702 C 0
s Ateles_marginatus.k141_899112                             61772 35 +    119057 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Ateles_marginatus.k141_899112                         T 702 C 0
s Ateles_paniscus.k141_1631200                               3723 35 -     25888 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Ateles_paniscus.k141_1631200                          T 720 C 0
s Avahi_laniger.k141_2840928                                 4475 35 -     16375 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                               795 35 +      2719 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26378445 35 +  51448160 GA--GACTTTGATAC----ACTACGGATTT-A--GAAAT--ga-ctt
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        3676 35 -     13118 GA--GACTTTGATAC----ACTACGGATTT-A--GAAAT--ga-ctt
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   41523 35 -     72089 GA--GACTTTGTTAC----ACTGCAGATTT-A--GAAAT--GA-CTT
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6557534 35 +   6870073 GA--GACTTTGATAT----ACTGCAGATTT-A--GAAAT--GA-CTT
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138137773 35 - 161108492 GA--GACTTTGATAT----ACTGCAGATTT-A--GAAAT--GA-CTT
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     570147 35 -    998990 GA--GACTTTGATAT----ACTGCAGATTT-A--GAAAT--GA-CTT
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136293506 35 - 158972876 GA--GACTTTGATAT----ACTGCAGATTT-A--GAAAT--GA-CTT
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1229262 35 -   1914593 GA--GACTTTGATAT----ACTGCAGATTT-A--GAAAT--GA-CTT
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               111616 35 -    171031 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTA
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 10642 35 +    125063 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTA
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                12690 35 -    216513 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTA
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        5230 35 -    134917 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTA
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3217847 35 -   8989139 AA--GACTTTGATAC----AATGCAGATTT-A--GAACT--GA-CTT
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           395551 35 -  15254737 AA--GACTTTGATAC----AATGCAGATTT-A--GAACT--GA-CTT
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2971285 35 +   6889770 AA--GACTTTGATAC----AATGCAGATTT-A--GAACT--GA-CTT
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11516363 35 +  39901454 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-CTT
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   11381 35 +     87036 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-CTT
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11263024 35 -  35597290 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-CTT
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11085553 35 +  39895921 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-CTT
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16452577 35 -  44759192 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-CTT
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21323532 35 + 157394656 GA--GACTTTGATAC----ACTGCAGATTT-A--GAAAT--GA-CTT
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135704759 35 - 157403528 GA--GACTTTGATAC----ACTGCAGATTT-A--GAAAT--GA-CTT
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_1557951                  319 28 +       644 ---------TACTAC----ACTACAGATTT-A--GAACA--GA-GTT
i Capromys_pilorides.CapPil_scaffold_1557951            I 7 C 0
s Carlito_syrichta.NW_007248099.1                          306855 27 +    345090 ----------GATAC----AGTGCGGATTT-A--GAACT--GA-GTT
i Carlito_syrichta.NW_007248099.1                       I 6 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               57794 34 +     67245 -A--GACTTTGATAC----ACTGCCGATTT-A--GAACT--GA-CTT
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   28287 27 +     33760 ---------TGATAA----ACTACAGATTT-A--GAACC--CA-GT-
i Castor_canadensis.CasCan_scaffold_47037               I 7 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   157091 35 -    276539 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-CTT
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15784460 28 -  24422027 ---------TGCTGC----ACTCCAGATTT-A--GCACA--GA-GTT
i Cavia_aperea.AVPZ01000278.1                           I 7 C 0
s Cavia_porcellus.DS562889.1                             15796392 28 -  24440124 ---------TGCTGC----ACTCCAGATTT-A--GCACA--GA-GTT
i Cavia_porcellus.DS562889.1                            I 7 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       174583 28 +    436027 ---------TGCTGC----ACTCCAGATTT-A--GCACA--GA-GTT
i Cavia_tschudii.CavTsc_scaffold_488                    I 7 C 0
s Cebus_albifrons.Contig22                               18888469 35 -  29618158 GA--GATTTTGATAC----CCTGCAGATTT-A--GAACT--GA-GTT
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 6013 35 -     26817 GA--GATTTTGATAC----CCTGCAGATTT-A--GAACT--GA-GTT
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                10978 35 +     25043 GA--AATTTTGATAC----ACTGTAGATTT-A--GAACT--GA-GTT
i Cebus_unicolor.k141_239009                            I 722 T 725
s Cephalopachus_bancanus.k141_702587                         5891 27 +     21754 ----------GATAC----ACTGCGGATTT-A--GAACT--GA-GTT
i Cephalopachus_bancanus.k141_702587                    I 6 C 0
s Ceratotherium_simum.JH767818.1                          4361571 35 +   7569818 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-CTT
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         1326 35 -      9338 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-CTT
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6553629 35 +   6739814 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Cercocebus_atys.KQ010443.1                            I 1237 T 1237
s Cercocebus_chrysogaster.k141_2328246                      25106 35 +     60454 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Cercocebus_chrysogaster.k141_2328246                  n 47 C 0
s Cercocebus_lunulatus.k141_4634644                           311 35 -     21101 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         57621 35 -    107033 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Cercocebus_torquatus.k141_3969582                     I 1237 T 1237
s Cercopithecus_ascanius.k141_4123525                         515 35 -     17608 GA--GATTTTGATAC----ATTGCAGATTT-A--GAACT--GA-GTT
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          28013 35 +     30494 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Cercopithecus_cephus.k141_598190                      C 0 T 1251
s Cercopithecus_diana.k141_2980617                          56856 35 -     59240 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Cercopithecus_diana.k141_2980617                      C 0 I 11
s Cercopithecus_hamlyni.k141_129805                           557 35 +     16677 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Cercopithecus_hamlyni.k141_129805                     I 14 I 11
s Cercopithecus_lowei.k141_623764                           22715 35 +     35983 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Cercopithecus_lowei.k141_623764                       C 0 T 1247
s Cercopithecus_albogularis.ctg51                              11989246 35 +  12117833 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46476001 35 +  46592721 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Cercopithecus_mona.ctg12                              C 0 T 1243
s Cercopithecus_neglectus.k141_2078027                      39552 35 -     45581 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                        561 35 +     35577 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                         334 35 -     25661 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                         312 35 -     17744 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Cercopithecus_pogonias.k141_3109732                   C 0 I 11
s Cercopithecus_roloway.k141_2263608                        19921 35 +     37128 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_1070855          1150 35 -      1715 GA--GACTTTGTTAC----ACTGCAGATTT-A--GAACA--GA-GTT
i Chaetophractus_vellerosus.ChaVel_scaffold_1070855     C 0 C 0
s Cheirogaleus_major.k141_1157592                           56780 35 -     68416 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            5822 35 +     13308 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             3286 35 -     18223 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             20309 35 +     25473 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           39348 35 +     57117 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          44023 35 +     54541 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15959625 28 +  43084221 ---------TGCTAC----ACTACAGATTT-A--GAACA--GA-GTT
i Chinchilla_lanigera.JH721867.1                        I 7 C 0
s Chiropotes_israelita.k141_1189915                         68838 35 +    196370 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTA
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          13018 35 +     40510 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTA
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15137476 35 -  15256731 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Chlorocebus_aethiops.ctg22                            I 1257 T 1257
s Chlorocebus_pygerythrus.k141_1486215                      32523 35 -     53260 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Chlorocebus_pygerythrus.k141_1486215                  I 1258 T 1258
s Chlorocebus_sabaeus.CM001963.2                        101143086 35 + 101219884 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Chlorocebus_sabaeus.CM001963.2                        I 1372 T 1372
s Choloepus_didactylus.ChoDid_scaffold_36182                14750 35 -     21363 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           760061 35 +    964067 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_141308              6862 35 -     12508 GA--GACTTTGATAC----ACTACAGATTT-A--GAATT--GA-GTT
i Chrysochloris_asiatica.ChrAsi_scaffold_141308         C 0 C 0
s Colobus_angolensis.KN985967.1                          10880293 35 +  10971483 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GAT
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147661451 35 + 156195979 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GAT
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            13438 35 +     23629 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GAT
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60611051 35 +  78930452 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-CTT
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         37509 35 -     40477 GA--GACTATGATAT----ACTGCAGATTT-A--GGAGT--GA-CTT
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 275338 28 -    399297 ---------TGATAG----TCCACAGACTT-A--GAACG--GA-GTT
i Cricetomys_gambianus.CriGam_scaffold_949              I 7 C 0
s Cricetulus_griseus.LT883672.1                          53026870 28 +  72327488 ---------TGATAG----TCCACAGATTT-A--GAATG--GA-GTT
i Cricetulus_griseus.LT883672.1                         I 7 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             17986 37 -     19186 AA--GACTTAGGTAC----ACTGTAGATTT-T--AAAATGTCG-CTT
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            49671 35 -     70449 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACG--GA-CTT
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  206035 28 -    956709 ---------TGATAC----ACCACAGGTTT-A--GAGCT--CT-TTT
i Ctenodactylus_gundi.CteGun_scaffold_447               I 6 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 28404 28 -     67205 ---------TGCTAC----ACTACAAATTT-A--GAACA--GA-GTT
i Ctenomys_sociabilis.CteSoc_scaffold_19489             I 7 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                15232 28 +     26546 ---------TGCTGT----TCTGCAGATTT-A--GAACA--GA-GTT
i Cuniculus_paca.CunPac_flattened_line_16637            I 7 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             56715 28 -    236241 ---------TGCTGC----ACTACAGATTT-A--GAACA--GA-GTT
i Dasyprocta_punctata.DasPun_flattened_line_634         I 7 C 0
s Dasypus_novemcinctus.JH568778.1                          179960 35 -   6883506 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--AG-GTT
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16842648 35 +  31942871 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80035129 35 -  96802777 GA--GACTTTGATAC----ACTACGGATTT-A--GAAAT--ga-ctt
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18697104 34 -  18957592 -A--GACTTTGATAC----ACGGCCGATTT-A--GAACT--GA-CTT
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 320230 34 +    993696 GA--CACTTT-ATAC----ACTGTAGATTT-A--GAACT--GA-CTT
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                    873 35 +    151128 GA--GACTTTGATCC----ACTGCAGATTC-G--GAACT--GA-CTT
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   155510 23 +    228994 ---------TGCTAC----CCTACAGATTT-A--GAACA--------
i Dinomys_branickii.DinBra_scaffold_1996                I 7 I 3
s Dipodomys_ordii.KN672545.1                              3653257 28 +   4240102 ---------GGATCC----ACTACAGATTT-A--GAACT--GA-ACT
i Dipodomys_ordii.KN672545.1                            I 5 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 24814 28 +     28912 ---------GGATCC----GCTACAGATTT-A--GAACT--GA-ACT
i Dipodomys_stephensi.DipSte_scaffold_44365             I 5 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                33976 28 -     73477 ---------TGCTGC----ACTGCAGATTT-A--GCACA--GA-GTT
i Dolichotis_patagonum.DolPat_scaffold_14102            I 7 C 0
s Eidolon_helvum.KE772537.1                                 10476 35 +     24177 GA--GACTTTGATAC----ATTGCAGATTT-A--GAACT--GA-CTT
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1489790 35 +   1727528 GA--GACTTCGATAC----ACTGCAGTTTT-A--GAAAT--GA-CTT
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7804541 36 +  15467074 GA--GGCTTTGATAC----ATAGCAGATTT-A--GAACA--GAAGTT
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        237528 28 -    369425 ---------TGGTAG----TCCAAAGATTT-A--GAAGG--GA-CTT
i Ellobius_lutescens.LOEQ01003611.1                     I 7 C 0
s Ellobius_talpinus.LOJH01090055.1                           4541 28 -      7838 ---------TGATAG----TCCACAGATTT-A--GAAGG--GA-GTT
i Ellobius_talpinus.LOJH01090055.1                      I 7 C 0
s Enhydra_lutris.KZ291749.1                              85869436 35 +  99434291 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-CTT
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4702065 35 +   6522550 GA--GACTTCGATAC----TCTGCAGATTA-A--GAACC--GA-CTT
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5850964 35 -   7175178 GA--GACTTTGATAC----AAGGCAGATTT-A--GAACT--GA-CTT
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13349466 35 +  41866177 GA--GACTTTGATAC----AAGGCAGATTT-A--GAACT--GA-CTT
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          10956 35 +     92910 GA--GACTTTGATAC----AAGGCAGATTT-A--GAACT--GA-CTT
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11530753 35 +  16010500 GA--AACCATGATGT----ACTGCAGATTT-A--GCACT--GG-CTT
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48769656 35 -  48907691 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Erythrocebus_patas.Contig8                            I 1259 T 1259
s Eschrichtius_robustus.EscRob_flattened_line_685          313331 35 +    330699 GA--GACTTTGATAG----ACTACGGATTT-A--GAAAT--GA-CTT
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             59761 35 +     89355 GA--AACTTTGATAC----ACTACAGATTT-A--GAAAT--GA-CTT
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              2827 35 +     13586 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               2762 35 -      6809 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             9238 35 +     36558 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             5552 35 +     60246 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 9035 35 +    109717 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               13414 35 +     16540 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                13690 35 +     27497 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           16156 35 +     26808 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                30880 35 +     46535 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              13603 35 -     29447 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129890635 35 - 159252932 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACG--GA-CTT
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129277710 35 - 158578461 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACG--GA-CTT
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 18845 35 +     52776 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACG--GA-CTT
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13890576 23 -  19261668 ---------TGCTAC----ACTACAAATTT-A--GAACA--------
i Fukomys_damarensis.KN123630.1                         I 3 I 3
s Galago_moholi.ctg555                                     208746 35 -    847004 GA--GACTTGGATTC----ACTGCAGATTC-A--GAACT--GA-GTT
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           11127 35 -     43889 GA--GACTTGGATTC----ACTGCAGATTC-A--GAACT--GA-GTT
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           8191 35 +     27357 GA--GACTTGGATTC----ACTGCAGACTC-A--GAACT--GA-GTT
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               154105 35 +    324696 GA--GACTTTGATAC----ACTACAGATTT-A--GAACT--GA-GTT
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    179305 35 -    189561 GA--GACTTTGATAC----ACTGCAGATTT-A--GAAAA--GA-CTT
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           10519 28 -     18683 ---------TGATAC----ACTACAGATTT-A--GAACT--GA-GTT
i Glis_glis.GliGli_scaffold_79770                       I 7 C 0
s Gorilla_beringei.k141_111300                               2985 35 -     14630 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Gorilla_beringei.k141_111300                          T 742 I 742
s Gorilla_gorilla.LT578340.1                            119650084 35 - 195582420 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Gorilla_gorilla.LT578340.1                            T 742 I 742
s Graphiurus_murinus.GraMur_scaffold_4493                   75048 28 +    118900 ---------TGATAC----ACTACAGATTT-A--GAACT--GA-GTT
i Graphiurus_murinus.GraMur_scaffold_4493               I 7 C 0
s Hapalemur_alaotrensis.k141_1198205                         3387 35 +      3980 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             25862 35 +     26611 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             3324 35 +     56096 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        26599 35 -     42470 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        43193 35 -     54384 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              14880 35 +     53719 GA--GACTTTGATAC----ACTGCAGATTT-A--GAATG--AA-CTT
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                25804 35 -     91191 GA--GACTTTGATAC----ACTGCAGATTT-A--GAAAT--GA-CTT
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2548960 28 +  31725842 ---------TGCTAC----ACTACAAATTT-A--GAACA--GA-GTT
i Heterocephalus_glaber.JH602058.1                      I 5 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               54358 35 +     73687 GA--GACTTTGAAAT----ACTGCAGATTT-A--GAACT--GA-GTT
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              145369 35 +    277961 GA--GACTTTGATAC----ACTGCGGATTT-A--GAAAT--GA-CTT
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      276708 35 -    477199 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-CTT
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              5866 35 -      9143 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-CTT
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg649                                    99665 35 +    115816 GA--GATTGTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Hoolock_leuconedys.ctg649                                C 0 I 12
s Hyaena_hyaena.HyaHya_flattened_line_20729                 13934 34 -     67322 GA--GACTTTGATAC----ACTGCAGATTT-A--GAATG--GA-CG-
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16877 28 -    119109 ---------TGCTGC----ACTACAGATTT-A--GCACA--GA-GTT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       I 7 C 0
s Hylobates_abbotti.k141_493872                              2802 35 +      5897 GA--GATTGCGATAC----ACTGCAGATTT-A--GAACT--GA-GGT
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_1485652                              1223 35 -      1697 GA--GATTGTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Hylobates_agilis.k141_1485652                         C 0 C 0
s Hylobates_klossii.k141_466549                              9247 35 +     11537 GA--GATTGTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14622348 35 -  25970782 GA--GATTGTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1133650                            2237 35 -      2775 GA--GATTGTGATAC----ACTGTGGATTT-A--GAACT--GA-GTT
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             30840 35 -     60944 GA--GATTGTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     4010 28 +     22540 ---------TGATAC----ACAACCGATTT-A--GAACA--GA-GTG
i Hystrix_cristata.HysCri_scaffold_50788                I 5 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7123877 28 +  13083262 ---------TGATAT----GCTACAGATTT-A--GAACG--GA-GTT
i Ictidomys_tridecemlineatus.JH393315.1                 I 7 C 0
s Indri_indri.k141_1884019                                   1063 35 -      2196 GA--GACTTTGATAC----ACTGCAAATTT-A--GAACT--GA-GTT
i Indri_indri.k141_1884019                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               7118 35 +     17520 GA--GGCTTTGATAC----ACTACAGATTT-A--GAAAT--GA-CTT
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8563418 28 +  11848649 ---------AGATAC----TCTACACATTT-A--GAACT--GG-GTC
i Jaculus_jaculus.JH725517.1                            I 5 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               21945 34 +     37189 -A--GACTCTGATAC----ACTACAGATTT-A--GAAAT--GA-CTT
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          47847 35 -    147782 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Lagothrix_lagothricha.k141_12968                      T 717 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   111859 35 -    115756 GA--GACTTTGGTAC----TCTGAAGATTT-A--GAACC--GA-CTT
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258404882 35 - 285822530 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        21754 35 +     39228 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            51127 35 +     63517 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        76369 35 +    116806 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     29392 35 -     33031 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3083648 35 -   3498232 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-CTT
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    10858 35 +     22452 GA--GACATTGATAC----ACAGCCGATTT-A--GAACT--GA-GTT
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            134276 35 +   3060487 GA--GACTTTGATAC----ACTACGGATTT-A--GAAAT--GA-CTT
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19246718 35 +  19376315 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Lophocebus_aterrimus.ctg55                            I 1238 T 1238
s Loris_lydekkerianus.k141_550999                            8494 35 +     84689 GA--GACTTGGATAC----TCTGCAGATTC-A--GAACG--GA-GTT
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3776245 35 +   6799190 GA--GACTTGGATAC----TCTGCAGATTC-A--GAACG--GA-GTT
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20589135 35 -  62548349 GA--GATTTTGAAAC----ATTGCAGATTT-A--GAATT--GA-GTT
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11085009 35 +  39895028 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-CTT
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             18407 35 +     74745 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Macaca_arctoides.k141_2201161                         I 1241 T 1241
s Macaca_assamensis.Contig65                             12704924 35 +  12821369 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Macaca_assamensis.Contig65                            I 1252 T 1252
s Macaca_cyclopis.k119_893486                                 569 35 -      3136 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           45320 35 +     63263 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Macaca_fascicularis.k141_155037                       I 1250 T 1250
s Macaca_fuscata.k119_599327                                   86 35 -      2568 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Macaca_fuscata.k119_599327                            T 81 I 11
s Macaca_leonina.k141_467472                                  594 35 -      7381 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Macaca_leonina.k141_467472                            n 35 I 11
s Macaca_maura.k141_251854                                  43831 35 -     79256 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196034001 35 + 196197964 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Macaca_mulatta.NC_041755.1                            I 1252 T 1252
s Macaca_nemestrina.KQ004885.1                           11444106 35 +  11645122 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Macaca_nemestrina.KQ004885.1                          I 1251 T 1251
s Macaca_nigra.k141_282495                                   2778 35 -     46448 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                 450 35 -     13212 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Macaca_radiata.k141_3680256                           n 35 I 11
s Macaca_siberu.k141_741907                                 14192 35 -     55006 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Macaca_siberu.k141_741907                             I 1251 T 1251
s Macaca_silenus.Contig12                                43839229 35 +  43892939 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Macaca_silenus.Contig12                               I 1251 T 1251
s Macaca_thibetana.k99_662710                               15479 35 -     24607 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               2783 35 -     27140 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                699894 35 +    802869 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-CTT
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43434640 35 -  43563597 AA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4448705 34 -   4543643 GA--GA-TTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Mandrillus_sphinx.Contig144                           I 1239 T 1238
s Manis_javanica.JSZB01003966.1                            144385 37 +    252755 GAGAGACTTTTATAC----ACTGCATATTT-A--GAACT--GA-CTT
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             34459 35 +     58827 GA--GACTTTGATAC----ACTGCATATTT-A--GAACT--GA-CTT
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36871717 28 +  64221397 ---------TGATAT----GCTACAGATTT-A--GAACG--GA-GTT
i Marmota_marmota.CZRN01000005.1                        I 7 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       62549 35 -    234502 GA--GACTTGGATAC----ATTACAGATTT-A--GAACT--GA-CTT
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_146202             247 35 -      1999 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-CTT
i Mellivora_capensis.MelCap_flattened_line_146202       C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233                9827 28 +     15977 ---------TGATAG----TCTACAGATTG-A--AAATG--GA-GTT
i Meriones_unguiculatus.MerUng_scaffold_52233           I 7 C 0
s Mesocricetus_auratus.KB708139.1                         1044610 28 -  26018355 ---------TGATAG----TCCACAGATTT-A--GAATG--GA-GTT
i Mesocricetus_auratus.KB708139.1                       I 7 C 0
s Mesoplodon_bidens.MesBid_scaffold_183284                   1988 35 +      2166 GA--GACTTTGACAC----ACTACGGATTT-A--GAAAT--GA-CTT
i Mesoplodon_bidens.MesBid_scaffold_183284              C 0 C 0
s Microcebus_murinus.CM007691.1                          16508002 35 +  47401472 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  29286 21 -     48017 --------------------CGGCTGATTT-A--GAACT--GA-GTT
i Microgale_talazaci.MicTal_scaffold_34660              I 8 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               20971 34 -     32043 -A--GACTTTGATAC----ACTGCCGATTT-A--GGACT--GA-CTG
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22817728 28 -  98408828 ---------TGATAG----TCCACAGATTT-A--GAAGG--GA-GCT
i Microtus_ochrogaster.CM001673.1                       I 7 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8207731 35 +  10048721 GA--GACTTTGATAC----CCAGCAGATTT-A--GAAGT--GA-CTT
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            32402 35 +     45743 GA--GACTTTGATAC----CCAGCAGATTT-A--GAAGT--GA-CTT
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                          423 35 +     29742 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Miopithecus_ogouensis.k141_2935907                    n 35 I 11
s Mirounga_angustirostris.MirAng_flattened_line_8852         8953 35 -    104932 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-CTT
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     3407 35 +      8497 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 144713 35 +    154973 AA--GACTTTGATAC----ACTACGGATTT-A--GAAAT--GA-CTT
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                159481 34 +    265003 -A--GACTTTGATAC----GCCGCAGATTT-A--GAACT--AA-GTT
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 2892 35 -      4346 GA--GACTTTGATAC----ACTGCAGATTT-A--GAAAT--GA-CTT
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  142580 28 -    168139 ---------TGATAC----ACTGCAGCTTT-A--GAATG--AA-CTT
i Mungos_mungo.MunMun_flattened_line_8729               I 5 C 0
s Murina_feae.MurFea_scaffold_2254                          17375 35 -    100666 GA--GACTTTGATAC----TCTGCGGATTT-A--GAACC--GA-CTT
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70764241 28 +  92629107 ---------TGATAC----TCCACAGATGT-A--GAACG--GA-ACT
i Mus_caroli.LT608236.1                                 I 7 C 0
s Mus_musculus.chr16                                     75487278 28 +  98207768 ---------TGATAC----TCCACAGATTT-A--GAACG--GA-ACT
i Mus_musculus.chr16                                    I 7 C 0
s Mus_pahari.LT608305.1                                  67553449 28 +  89017189 ---------TGATAC----TCCACAGATTT-A--GAACG--GA-GCT
i Mus_pahari.LT608305.1                                 I 7 C 0
s Mus_spretus.CM004110.1                                 74328459 28 +  97876770 ---------TGATAC----TCCACAGATTT-A--GAACG--GA-ACT
i Mus_spretus.CM004110.1                                I 7 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              9002 28 +     98495 ---------TGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 7 C 0
s Mustela_putorius.JH417978.1                             4421818 35 -  28371801 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-CTT
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     87954 28 -    117718 ---------GGCTGC----ACTACAGATTT-A--GAACA--GA-GTT
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 7 C 0
s Myotis_brandtii.KE161952.1                               965695 35 +   8389877 GA--GACTTTGATAC----TCTGCGGATTT-A--GAACC--AA-CTT
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5017386 35 +   6462685 GA--GACTTTGATAC----TCTGCGGATTT-A--GAACC--GA-CTT
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3463282 35 -   3747815 GA--GACTTTGATAC----TCTGCGGATTT-A--GAACC--GA-CTT
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         8477 35 +     66751 GA--GACTTTGATAC----TCTGCGGATTT-A--GAACC--AA-CTT
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3352 35 -      8794 GA--GACATTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            108337 28 +    362372 ---------TGATAC----TCTACAAATTT-A--GAACA--CA-GTT
i Nannospalax_galili.KL201303.1                         I 7 C 0
s Nasalis_larvatus.k141_153429                               5678 35 +     48152 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GAT
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4482552 35 -  14209539 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-CTT
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3949325 35 -   4490290 GA--GACTTTGATAC----ACTACGGATTT-A--GAAAT--ga-ctt
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  47598 34 +     94413 -A--GACTTTGATAT----GCTGCAGATTT-A--GAACT--GA-CTT
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1439838                            550 35 +      3718 GA--GATTTTGATAC----ACTCCAGATTT-A--GAACT--GA-GTT
i Nomascus_annamensis.k141_1439838                      T 736 C 0
s Nomascus_concolor.k141_49591                                773 35 +      2014 GA--GATTTTGATAC----ACTCCAGATTT-A--GAACT--GA-GTT
i Nomascus_concolor.k141_49591                          T 736 C 0
s Nomascus_gabriellae.k141_906566                            2101 35 -      2544 GA--GATTTTGATAC----ACTCCAGATTT-A--GAACT--GA-GTT
i Nomascus_gabriellae.k141_906566                       I 58 C 0
s Nomascus_siki_b.tarseq_1444                             524 40 -      7988 GA--GATTTTGATATAAAAACTGCAGATTTGA--AGACT--GA-GTT
i Nomascus_siki_b.tarseq_1444                       I 367 n 737
s Nomascus_siki_a.k141_595747                                   326 35 +      4512 GA--GATTTTGATAC----ACTCCAGATTT-A--GAACT--GA-GTT
i Nomascus_siki_a.k141_595747                             T 736 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                28002 35 +   3668941 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-CTT
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65564840 35 -  95554990 GA--GACTTGGATAC----TCTGCAGATTG-A--GAACG--GA-GTT
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            1685 35 +      6470 GA--GACTTGGATAC----TCTGCAGATTG-A--GAACG--GA-GTT
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65667210 35 +  89412551 GA--GACTTGGATAC----TCTGCAGATTG-A--GAACG--GA-GTT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4993833 33 -  23139505 GA--GACATGGATGC----ACTTCAGATTG-A--GAGC----A-GTT
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3683426 28 +  10294119 ---------TTCTAC----ACTACAGATTT-a--gaaca--ga-gtt
i Octodon_degus.JH651621.1                              I 7 C 0
s Odobenus_rosmarus.KB229369.1                             677208 35 -   3126709 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-CTT
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1078020 35 +   1425656 GA--GACTTTGATAC----ACTGCAGTTTT-A--GAAAT--GA-CTT
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         35175 35 +     78940 GA--GACTTTGATAC----ACTGCAGATTT-A--GAAAA--GA-CTT
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  123003 28 +    145789 ---------TGATAG----TCCACAGATTT-A--GAAGA--GA-GTT
i Ondatra_zibethicus.OndZib_scaffold_6821               I 7 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  34758 28 +     62360 ---------CGATAG----TCCACAGATTT-A--GAATG--TA-GCT
i Onychomys_torridus.OnyTor_scaffold_12578              I 7 C 0
s Orcinus_orca.KB316965.1                                 7223009 35 -   7562323 GA--GACTTTGATAC----ACTACGGATTT-A--GAAAT--ga-ctt
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              41391 35 -     66828 AG--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141873516 35 + 163896628 GA--GACATTGATAC----ACAGCCGATTT-A--GAACT--GA-GTT
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      305341 35 -    505867 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-CTT
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       36834 35 +     38679 GA--GACTTGGATTC----ACTGCAGATTC-A--GAACT--GA-GTT
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18006276 35 -  38779656 GA--GACTTGGATTC----ACTGCAGATTC-A--GAACT--GA-GTT
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134075597 35 - 275406953 GA--GACTTTGATAC----ACTGCAGATTT-A--GAAAT--GA-CTT
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      76811 35 +    140051 GA--GACTTTGATAC----ACTGCAGATTT-A--GAAAT--GA-CTT
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127572329 35 - 205426864 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Pan_paniscus.CM003386.1                               T 742 C 0
s Pan_troglodytes.CM009241.2                            120149482 35 - 196562556 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Pan_troglodytes.CM009241.2                            T 742 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  32036 35 +    295523 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACG--GA-CTT
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3635769 35 +  18214204 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACG--GA-CTT
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5025417 35 -   6340057 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACG--GA-CTT
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1064458 35 -   1292953 GA--GACTTTGATAC----ACTGCAGATTT-A--GAAAT--GA-CTT
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188154667 35 - 188283584 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Papio_anubis.CM001492.2                               I 1243 T 1243
s Papio_cynocephalus.k141_883042                             2985 35 +      5367 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47512056 35 +  47705337 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Papio_hamadryas.Contig15                              I 1235 T 1235
s Papio_kindae.k141_5458022                                 64798 35 -    104429 AA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    4566 35 +     14967 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                  427 35 -      7628 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Papio_ursinus.k141_1345919                            n 35 I 11
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113336 35 -    135482 GA--GACTTTGATAC----ACTGCAGATTT-A--GAAGA--GA-TGT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           2887 35 -     23713 GA--GACTTGGATAC----ACTGCAGATTC-A--GAACT--GA-GTT
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            22186 35 -     27972 GA--GACTTGGATAC----ACTGCAGATTC-A--GAACT--GA-GTT
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      40810 28 -     45160 ---------TGATCC----ACTACAAATTT-A--GAACT--TA-CTT
i Perognathus_longimembris.PerPac_flattened_line_22291  I 5 C 0
s Peromyscus_maniculatus.KI615518.1                       4947934 28 -   8017169 ---------TGATAG----TCTacagattt-a--gaatg--ta-gtt
i Peromyscus_maniculatus.KI615518.1                     I 7 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    10119 24 -     36578 -----------TTAC----ACTACAGACTT-A--GAACA--GA---C
i Petromus_typicus.PetTyp_scaffold_33007                I 3 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            119626 35 -    122454 GA--GACTTTGATAC----ACTACGGATTT-A--GAAAT--GA-CTT
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           2682 35 -      3310 GA--GATTTTGATGC----ACTGCAGATTT-A--GAACT--GA-GAT
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       22587 35 -     82327 GA--GATTTTGATGC----ACTGCAGATTT-A--GAACT--GA-GAT
i Piliocolobus_gordonorum.k141_902470                   I 14 C 0
s Piliocolobus_kirkii.k141_929665                             441 35 +      7694 GA--GATTTTGATAC----ACTGCAAATTT-A--GAACT--GA-TTT
i Piliocolobus_kirkii.k141_929665                       C 0 I 7
s Piliocolobus_tephrosceles.PDMG02000036.1               26737348 35 +  26888534 GA--GATTTTGATGC----ACTGCAGATTT-A--GAACT--GA-GAT
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            95146 35 +    112873 GA--GACTTTTATAC----TCTGCAGATTT-A--GAATC--GA-CTT
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             41330 35 -     61926 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTA
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        22759 35 +     78826 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTA
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              6710 35 -     15800 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTA
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                         9908 35 -     16101 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTA
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          3217 35 +      9673 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTA
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13472211 35 -  19735023 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTA
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           11119 35 -     31692 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTA
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           3694 35 +     21690 GA--TGCTTTGATAC----ACTATGGATTT-A--GAAAT--TA-CTT
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       20551 35 +     44506 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        20761 35 +     67491 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      11002 35 -     98129 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     20607 35 +    147771 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        20857 35 -     23762 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          1323 35 -     55515 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         20676 35 +    152463 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      7436 35 +      8943 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                         10396 35 +    134592 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          20986 35 -     75465 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              184874 35 -    373494 GA--GATTTTGATAC----ACTGCAGATTG-A--GAACT--GA-GTT
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19804781 35 +  19899266 GA--GATTTTGATAC----ACTGCAGATTG-A--GAACT--GA-GTT
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               4176 35 -     15069 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Presbytis_comata.k141_672698                          I 1260 T 1260
s Presbytis_mitrata.k141_860013                              4310 35 +     14865 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Presbytis_mitrata.k141_860013                         I 1260 T 1260
s Procavia_capensis.ProCapCap_scaffold_15315                74222 35 +     78963 GA--GACTTTGAAAT----ACTGCAGATTT-A--GAACT--GA-GTT
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6846258 35 +  12164890 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    664875 35 -   2312742 NN--NNNNNNNNNNN----NNNNNNNNNNN-N--NNNNN--NN-NNN
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         1402 35 +     11805 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           40736 35 +     52369 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         33125 35 -     44753 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            15046 35 +     27322 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       14685 35 -     53241 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         36957 35 -     48185 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           31366 28 +     77221 ---------tgatag----tctacagattG-A--AAATG--GA-GTT
i Psammomys_obesus.NESX01026517.1                       I 7 C 0
s Pteronotus_parnellii.KE867983.1                            2152 34 -     27784 -A--GACTTTGATAC----GCTGCAGATTT-A--GAACT--GA-CTT
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        243911 35 -    344369 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-CTT
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13244274 35 -  17261082 TA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-CTT
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             602225 35 -   3946241 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-CTT
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131531999 35 - 161321710 GA--GACTTTGATAT----ACTGCAGATTT-A--GAACG--GA-CTT
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             27045 35 +     56732 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GAT
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6803536 35 +   6970761 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GAT
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             2929 35 +     18040 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GAT
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                14098 35 +     68503 GA--GACTTTGATAC----ACTGCAGTTTT-A--GAAAT--GA-CTT
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13913342 28 +  90463843 ---------TGATAC----TCCACAGACTT-A--GAACG--GA-GTT
i Rattus_norvegicus.chr11                               I 7 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1786095 35 +   2252614 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-CTT
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_1391695                            407 35 -      1866 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Rhinopithecus_bieti.k119_1391695                      n 35 I 11
s Rhinopithecus_roxellana.NC_044549.1                   206376064 35 - 206558726 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Rhinopithecus_roxellana.NC_044549.1                   I 1256 T 1256
s Rhinopithecus_strykeri.ctg4                            44853708 35 -  45163003 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                17567 35 +    109198 GA--GACTTTGATAC----ACCGCAGATTT-A--GAACT--GA-CTT
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       5904 35 +     12214 GA--GACTTTGATAA----ACTGCAGATTT-A--GAAAT--GA-CTT
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15670446 35 -  43202129 GA--GATTTTGATAC----CCTGCAGATTC-A--GAACT--GA-GTT
i Saimiri_boliviensis.NW_024100938.1                    T 703 C 0
s Saimiri_cassiquiarensis.k141_808270                        2312 35 +     34089 GA--GATTTTGATAC----CCTGCAGATTC-A--GAACT--GA-GTT
i Saimiri_cassiquiarensis.k141_808270                   T 703 C 0
s Saimiri_macrodon.k141_2087127                              2253 35 -     60842 GA--GATTTTGATAC----CCTGCAGATTC-A--GAACT--GA-GTT
i Saimiri_macrodon.k141_2087127                         T 703 C 0
s Saimiri_oerstedii.k141_841116                              2348 35 +     67014 GA--GATTTTGATAC----CCTGCAGATTC-A--GAACT--GA-GTT
i Saimiri_oerstedii.k141_841116                         T 703 C 0
s Saimiri_sciureus.k141_1947592                              3029 35 +     60816 GA--AATTTTGATAC----ACTGTAGATTT-A--GAACT--GA-GTT
i Saimiri_sciureus.k141_1947592                         C 0 T 703
s Saimiri_ustus.k141_1282476                                 2263 35 -     76454 GA--GATTTTGATAC----CCTGCAGATTC-A--GAACT--GA-GTT
i Saimiri_ustus.k141_1282476                            T 703 C 0
s Sapajus_apella.ctg10                                   17338997 35 -  30362882 GA--GATTTTGATAC----CCTGCAGATTT-A--GAACT--GA-GTT
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         18372 35 -     62485 GA--GATTTTGATAC----CCTGCAGATTT-A--GAACT--GA-GTT
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   29657 35 -    114521 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-CTT
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        1792 35 +     15331 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Semnopithecus_entellus.k141_1572367                   n 35 I 11
s Semnopithecus_hypoleucos.k141_761524                       7188 35 +     20762 GA--GATTTTGATAC----AGTGCAGATTT-A--GAACT--GA-GTT
i Semnopithecus_hypoleucos.k141_761524                  I 1258 T 1258
s Semnopithecus_johnii.k141_785014                         117186 35 +    130994 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Semnopithecus_johnii.k141_785014                      n 35 I 11
s Semnopithecus_priam.k141_410937                           35977 35 +     46263 GA--GATTTTGATAC----AGTGCAGATTT-A--GAACT--GA-GTT
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     29092 35 +     42640 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        12140 35 +     30600 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Semnopithecus_vetulus.k141_1143185                    n 35 I 11
s Sigmodon_hispidus.SigHis_scaffold_11332                   97555 28 -    120886 ---------TGATAG----TCCACAGATTC-A--AAATG--AA-GTT
i Sigmodon_hispidus.SigHis_scaffold_11332               I 7 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            16296 35 +    739146 GA--GACTTTGATAT----ACTACAGATTT-A--GAACT--CA-CTT
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17748511 35 -  27805282 AC--GACTTTGGTA------CCTCAGATTT-A--GAACTGTGG-CTT
i Sorex_araneus.JH798170.1                              C 0 I 1
s Spermophilus_dauricus.KZ294190.1                        2237793 28 +   2842873 ---------TGATAT----GCTACAGATTT-A--GAACG--GA-GTT
i Spermophilus_dauricus.KZ294190.1                      I 7 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             232680 26 -    276980 -----------ATAC----ACTGCAGATTT-A--GAACT--GA-CTC
i Spilogale_gracilis.SpiGra_flattened_line_905          I 3 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            25239 35 +     62062 GA--GACTTTGATAC----ACTGCAGATTT-A--GAATG--AA-CTT
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189270148 35 + 218635234 GA--GACTTTGATAC----ACTGCAGATTT-A--GGACT--GA-CTT
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                     13899937 35 +  13920577 GA--GATTGTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_148405               3918 35 -      6063 GA--GACTTTGACAC----CCCGCAGATTT-A--GAACT--GA-CTT
i Tadarida_brasiliensis.TadBra_scaffold_148405          T 366 I 904
s Tamandua_tetradactyla.TamTet_scaffold_26877               13026 35 +     45698 GA--GACATTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      805015 35 +   1148477 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-CTT
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  55676 35 +     99546 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-CTT
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               24338 27 +     42269 ----------GATAC----GCTACAGATTT-A--GAACT--GA-GTT
i Tarsius_lariang.k141_609102                           I 6 C 0
s Tarsius_wallacei.k141_48636                               57654 27 +     65473 ----------GATAC----GCTACAGATTT-A--GAACT--GA-GTT
i Tarsius_wallacei.k141_48636                           I 6 C 0
s Theropithecus_gelada.CM009951.1                       194006195 35 - 194193292 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Theropithecus_gelada.CM009951.1                       I 1235 T 1235
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             37188 12 -     47444 -----------------------------T-A--AAGCA--GA-GTT
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         I 7 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  1910 35 +      6782 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACA--GA-GTT
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  134162 34 -    259118 -A--GACTTTGATAC----ACTGCCGATTT-A--GAACT--GA-CTT
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        25298 35 +     38948 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Trachypithecus_auratus.k141_738098                    I 1258 T 1258
s Trachypithecus_crepusculus.k141_1588528                   19025 35 -     32910 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Trachypithecus_crepusculus.k141_1588528               I 1258 T 1258
s Trachypithecus_cristatus.k141_1011511                       412 35 -     12939 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Trachypithecus_cristatus.k141_1011511                 n 35 I 11
s Trachypithecus_francoisi.k141_768164                        352 35 -     14244 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Trachypithecus_francoisi.k141_768164                  n 35 I 11
s Trachypithecus_geei.k141_670367                           41745 35 -     54611 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Trachypithecus_geei.k141_670367                       I 1256 T 1256
s Trachypithecus_germaini.k141_878600                         575 35 +      1165 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Trachypithecus_germaini.k141_878600                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     1723 35 -     15592 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                           380 35 +     14371 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  50137 35 +     51589 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Trachypithecus_leucocephalus.k141_283605              I 1258 T 1258
s Trachypithecus_melamera.k141_238507                       13313 35 +     14732 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Trachypithecus_melamera.k141_238507                   I 1258 T 1258
s Trachypithecus_obscurus.k141_1115109                       3790 35 -     28054 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Trachypithecus_obscurus.k141_1115109                  I 1258 T 1258
s Trachypithecus_phayrei.ctg3                            44658585 35 -  44834318 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Trachypithecus_phayrei.ctg3                           I 1258 T 1258
s Trachypithecus_pileatus.k141_1022309                        888 35 +     13828 GA--GATTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Trachypithecus_pileatus.k141_1022309                  C 0 I 11
s Tragulus_javanicus.TraJav_scaffold_14717                   3504 35 +     90398 GA--GACTTTGATAC----ACTGCGGATTT-A--GAAAT--GA-CTT
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16079599 35 +  31416278 GA--GACTTTGAAAT----GCTGCAGATTT-A--GAATT--GA-GTT
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2790003 35 -   3938065 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    2523 35 +     13056 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69311728 35 -  96451834 GA--GACTTTGATAC----ACTACGGATTT-A--GAAAT--ga-ctt
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 24845 35 -     25548 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-CTT
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6512470 28 +  28682327 ---------TGATAC----ACTGCAGATTT-A--GAACT--GA-CTT
i Ursus_maritimus.KK498671.1                            I 5 C 0
s Varecia_rubra.k141_432109                                  3099 35 -     20643 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             22643 35 -     33872 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-GTT
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1522957 35 -   2331223 AA--GACTTTGATAC----AATGCAGATTT-A--GAACT--GA-CTT
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                135409 35 -    281493 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-CTT
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       124891 28 -    134049 ---------TGATAT----GCTACAGATTT-A--GAACA--GA-CTT
i Xerus_inauris.XerIna_scaffold_7898                    I 7 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        211938 35 -    227762 GA--GACTTTGATAC----ACTGCAGATTT-A--GAACT--GA-CTT
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     13128 28 -     20485 ---------TGATAC----TCTACAGATTC-A--CAACT--GG-GTC
i Zapus_hudsonius.ZapHud_scaffold_64392                 I 5 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           5224 35 -      8775 GA--GACTTTGACAC----ACTACGGATTT-A--GAAAT--GA-CTT
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Echinops_telfairi.JH980316.1                           22994071  0 -  44670279 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               10363  7 +    209709 gg-a---aaac
s Acinonyx_jubatus.LLWD01000356.1                         2031694  7 +   3721120 GG-A---AAAC
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    110277  7 -    189883 GG-A---ATAC
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10655012  7 +  23371972 GG-A---AAAC
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7091739  7 -  16596857 GG-A---AAAC
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   10706  7 -     22067 AG-A---ATAC
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_3103707                  60635  7 +     61638 GG-A---AAAC
i Allenopithecus_nigroviridis.k141_3103707              I 35 I 5
s Allochrocebus_lhoesti.k141_4825038                        52443  7 +     53391 GG-A---AAAC
i Allochrocebus_lhoesti.k141_4825038                    I 35 C 0
s Allochrocebus_preussi.k141_1202907                         3168  7 +     72529 GG-A---AAAC
i Allochrocebus_preussi.k141_1202907                    I 35 C 0
s Allochrocebus_solatus.k141_787528                          2743  7 +      3797 GG-A---AAAC
i Allochrocebus_solatus.k141_787528                     I 35 C 0
s Alouatta_belzebul.k141_1818029                             7916  7 -     18050 GG-A---AAAC
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  9029  7 -     11521 GG-A---AAAC
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              8593  7 -     21359 GG-A---AAAC
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_298055                                  598  7 +      1823 GG-A---AAAC
i Alouatta_juara.k141_298055                            I 35 C 0
s Alouatta_macconnelli.k141_1331706                          7884  7 -     10438 GG-A---AAAC
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            4540  7 +      7047 GG-A---AAAC
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             8539  7 +     10410 GG-A---AAAC
i Alouatta_palliata.k141_1316127                        C 0 T 713
s Alouatta_puruensis.k141_1284840                            1629  7 -      4927 GG-A---AAAC
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             4559  7 +      6429 GG-A---AAAC
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3518463  7 +   4113121 GG-A---AAAC
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      388634  7 -    631301 GA-A---AAAT
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            29063  7 +     33004 GG-A---AAAC
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 60279  7 +     78111 GG-A---AAAC
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            3217  7 +     22701 GG-A---AAAC
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5747175  7 +   9889416 GG-A---AAAC
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             3760  7 -    104377 GG-A---AAAC
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               3766  7 +     23246 GG-A---AAAC
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     1782  7 +      5067 GG-C---AAAC
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      15729  7 +     17483 GG-A---AAAC
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 7029  7 -     29036 GA-C---AAAT
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9537028  7 +  39197703 GG-A---AAAC
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             58312  7 +     85812 GG-A---AAAC
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                 9311  7 +     89302 GG-A---AAAC
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             13816  7 -     58268 GG-A---AAAC
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             61807  7 +    119057 GG-A---AAAC
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               3758  7 -     25888 GG-A---AAAC
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 4510  7 -     16375 GG-A---AAAC
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                               830  7 +      2719 GG-A---AAAC
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26378480  5 +  51448160 gg-a---aa--
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        3711  5 -     13118 gg-a---aa--
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   41558  7 -     72089 GG-A---AAAC
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6557569  7 +   6870073 GG-A---AAAC
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138137808  7 - 161108492 GG-A---AAAC
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     570182  7 -    998990 GG-A---AAAC
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136293541  7 - 158972876 GG-A---AAAC
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1229297  7 -   1914593 GG-A---AAAC
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               111651  7 -    171031 GG-A---AAAC
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 10677  7 +    125063 GG-A---AAAC
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                12725  7 -    216513 GG-A---AAAC
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        5265  7 -    134917 GG-A---AAAC
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3217882  7 -   8989139 GG-A---AAAC
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           395586  7 -  15254737 GG-A---AAAC
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2971320  7 +   6889770 GG-A---AAAC
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11516398  7 +  39901454 GG-A---AAAC
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   11416  7 +     87036 GG-A---AAAC
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11263059  7 -  35597290 GG-A---AAAC
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11085588  7 +  39895921 GG-A---AAAC
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16452612  7 -  44759192 GG-A---AAAC
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21323567  7 + 157394656 GG-A---AAAC
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135704794  7 - 157403528 GG-A---AAAC
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_1557951                  347  7 +       644 TG-A---AAAC
i Capromys_pilorides.CapPil_scaffold_1557951            C 0 C 0
s Carlito_syrichta.NW_007248099.1                          306882  7 +    345090 GG-A---AAAC
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               57828  7 +     67245 GA-A---AAAT
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   28314  7 +     33760 GG-A---AAAC
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   157126  7 -    276539 GA-A---AAAC
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15784488  7 -  24422027 TG-A---AAAC
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15796420  7 -  24440124 TG-A---AAAC
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       174611  7 +    436027 TG-A---AAAC
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18888504  7 -  29618158 GG-A---AAAC
i Cebus_albifrons.Contig22                              C 0 I 725
s Cebus_olivaceus.k141_93739                                 6048  7 -     26817 GG-A---AAAC
i Cebus_olivaceus.k141_93739                            C 0 I 725
s Cebus_unicolor.k141_239009                                10288  7 +     25043 GG-A---AAAC
i Cebus_unicolor.k141_239009                            T 725 I 725
s Cephalopachus_bancanus.k141_702587                         5918  7 +     21754 GG-A---AAAC
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4361606  7 +   7569818 GG-A---AAAC
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         1361  7 -      9338 GG-A---AAAC
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6552427  7 +   6739814 GG-A---AAAC
i Cercocebus_atys.KQ010443.1                            T 1237 C 0
s Cercocebus_chrysogaster.k141_2328246                      25141  7 +     60454 GG-A---AAAC
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                           346  7 -     21101 GG-A---AAAC
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         56419  7 -    107033 GG-A---AAAC
i Cercocebus_torquatus.k141_3969582                     T 1237 C 0
s Cercopithecus_ascanius.k141_4123525                         550  7 -     17608 GG-A---AAAC
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          26797  7 +     30494 GG-A---AAAC
i Cercopithecus_cephus.k141_598190                      T 1251 C 0
s Cercopithecus_diana.k141_1490386                           2821  7 -      4022 GG-A---AAAC
i Cercopithecus_diana.k141_1490386                      I 49 C 0
s Cercopithecus_hamlyni.k141_381099                          2713  7 -      3505 GG-A---AAAC
i Cercopithecus_hamlyni.k141_381099                     I 35 C 0
s Cercopithecus_lowei.k141_623764                           21503  7 +     35983 GG-A---AAAC
i Cercopithecus_lowei.k141_623764                       T 1247 C 0
s Cercopithecus_albogularis.ctg51                              11989281  7 +  12117833 GG-A---AAAC
i Cercopithecus_albogularis.ctg51                             C 0 T 1241
s Cercopithecus_mona.ctg12                               46474793  7 +  46592721 GG-A---AAAC
i Cercopithecus_mona.ctg12                              T 1243 C 0
s Cercopithecus_neglectus.k141_2078027                      39587  7 -     45581 GG-A---AAAC
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                        596  7 +     35577 GG-A---AAAC
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                         369  7 -     25661 GG-A---AAAC
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        3442  7 -      4411 GG-A---AAAC
i Cercopithecus_pogonias.k141_1977419                   I 49 C 0
s Cercopithecus_roloway.k141_2263608                        19956  7 +     37128 GG-A---AAAC
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_1070855          1185  7 -      1715 GG-A---AAAC
i Chaetophractus_vellerosus.ChaVel_scaffold_1070855     C 0 C 0
s Cheirogaleus_major.k141_1157592                           56815  7 -     68416 GG-A---AAAC
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            5857  7 +     13308 GG-A---AAAC
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             3321  7 -     18223 GG-A---AAAC
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             20344  7 +     25473 GG-A---AAAC
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           39383  7 +     57117 GG-A---AAAC
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          44058  7 +     54541 GG-A---AAAC
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15959653  7 +  43084221 TG-A---AAAC
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         68873  7 +    196370 GG-A---AAAC
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          13053  7 +     40510 GG-A---AAAC
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15136254  7 -  15256731 GG-A---AAAC
i Chlorocebus_aethiops.ctg22                            T 1257 C 0
s Chlorocebus_pygerythrus.k141_1486215                      31300  7 -     53260 GG-A---AAAC
i Chlorocebus_pygerythrus.k141_1486215                  T 1258 C 0
s Chlorocebus_sabaeus.CM001963.2                        101141749  7 + 101219884 GG-A---AAAC
i Chlorocebus_sabaeus.CM001963.2                        T 1372 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                14785  7 -     21363 GG-A---AAAC
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           760096  7 +    964067 GG-A---AAAC
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_141308              6897  6 -     12508 GG-G----AAC
i Chrysochloris_asiatica.ChrAsi_scaffold_141308         C 0 C 0
s Colobus_angolensis.KN985967.1                          10880328  7 +  10971483 GG-A---AAAC
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147661486  7 + 156195979 GG-A---AAAC
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            13473  7 +     23629 GG-A---AAAC
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60611086  7 +  78930452 GG-A---AAAC
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         37544  7 -     40477 GA-A---AAAC
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 275366  7 -    399297 AG-A---ATAC
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53026898  7 +  72327488 GG-A---ATAC
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             18023  7 -     19186 AA-T---ATGC
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            49706  7 -     70449 GG-A---AAAC
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  206063  7 -    956709 GG-C---AAAC
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 28432  7 -     67205 TG-A---AAAC
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                15260  7 +     26546 TG-A---AAAC
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             56743  7 -    236241 TG-A---AAAC
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          179995  7 -   6883506 GG-A---AAAC
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16842683  7 +  31942871 GG-A---AAAC
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80035164  5 -  96802777 gg-a---aa--
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18697138  7 -  18957592 ga-a---aaat
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 320264  7 +    993696 GG-A---AAAC
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                    908  7 +    151128 GG-A---AAAC
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   155536  7 +    228994 TG-A---AAAC
i Dinomys_branickii.DinBra_scaffold_1996                I 3 C 0
s Dipodomys_ordii.KN672545.1                              3653285  7 +   4240102 GG-A---AAAC
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 24842  7 +     28912 GG-A---AAAC
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                34004  7 -     73477 TG-A---AAAC
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Eidolon_helvum.KE772537.1                                 10511  7 +     24177 GA-A---AAAC
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1489825  7 +   1727528 GG-A---AAAC
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7804577  7 +  15467074 GG-A---AAAC
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        237556  7 -    369425 GG-G---AAAC
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           4569  7 -      7838 GG-A---AAAC
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85869471  7 +  99434291 GG-A---AAAC
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4702100  6 +   6522550 GA-A----AAC
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5850999  7 -   7175178 GG-A---AAAC
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13349501  7 +  41866177 GG-A---AAAC
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          10991  7 +     92910 GG-A---AAAC
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11530788  7 +  16010500 GC-A---AAAC
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48768432  7 -  48907691 GG-A---AAAC
i Erythrocebus_patas.Contig8                            T 1259 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          313366  5 +    330699 GG-A---AA--
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             59796  5 +     89355 GG-A---AA--
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              2862  7 +     13586 GG-A---AAAC
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               2797  7 -      6809 GG-A---AAAC
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                             9273  7 +     36558 GG-A---AAAC
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             5587  7 +     60246 GG-A---AAAC
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 9070  7 +    109717 GG-A---AAAC
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               13449  7 +     16540 GG-A---AAAC
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                13725  7 +     27497 GG-A---AAAC
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           16191  7 +     26808 GG-A---AAAC
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                30915  7 +     46535 GG-A---AAAC
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              13638  7 -     29447 GG-A---AAAC
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129890670  7 - 159252932 GG-A---AAAC
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129277745  7 - 158578461 GG-A---AAAC
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 18880  7 +     52776 GG-A---AAAC
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13890602  7 -  19261668 TG-A---AAAC
i Fukomys_damarensis.KN123630.1                         I 3 C 0
s Galago_moholi.ctg555                                     208781  7 -    847004 GG-A---AAAC
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           11162  7 -     43889 GG-A---AAAC
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           8226  7 +     27357 GG-A---AAAC
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               154140  7 +    324696 GG-A---AAAC
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    179340  7 -    189561 GG-A---AAAC
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           10547  7 -     18683 GG-G---AAAC
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               3762  7 -     14630 GG-A---AAAC
i Gorilla_beringei.k141_111300                          I 742 I 1
s Gorilla_gorilla.LT578340.1                            119650861  7 - 195582420 gg-a---aaac
i Gorilla_gorilla.LT578340.1                            I 742 I 1
s Graphiurus_murinus.GraMur_scaffold_4493                   75076  7 +    118900 GG-G---AAAC
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1198205                         3422  7 +      3980 GG-A---AAAC
i Hapalemur_alaotrensis.k141_1198205                    C 0 C 0
s Hapalemur_gilberti.k141_97962                             25897  7 +     26611 GG-A---AAAC
i Hapalemur_gilberti.k141_97962                         C 0 C 0
s Hapalemur_griseus.k141_1387522                             3359  7 +     56096 GG-A---AAAC
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        26634  7 -     42470 GG-A---AAAC
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        43228  7 -     54384 GG-A---AAAC
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              14915  7 +     53719 GG-A---AAAC
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                25839  7 -     91191 GG-A---AAAC
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2548988  7 +  31725842 TG-A---AAAC
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               54393  7 +     73687 GG-A---AAAC
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              145404  7 +    277961 GG-A---AAAC
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      276743  7 -    477199 GG-A---AAAC
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              5901  7 -      9143 GG-A---AAAC
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      2279  7 -   7690867 GG-A---AAAC
i Hoolock_leuconedys.ctg79                                 T 516 I 1145
s Hyaena_hyaena.HyaHya_flattened_line_20729                 13968  7 -     67322 GG-A---AAAC
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16905  7 -    119109 TG-A---AAAC
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              2837  7 +      5897 GG-A---AAAG
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_1485652                              1258  7 -      1697 GG-A---AAAC
i Hylobates_agilis.k141_1485652                         C 0 C 0
s Hylobates_klossii.k141_466549                              9282  7 +     11537 GG-A---AAAC
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14622383  7 -  25970782 GG-A---AAAC
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1133650                            2272  7 -      2775 GG-A---AAAC
i Hylobates_muelleri.k141_1133650                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             30875  8 -     60944 GGGA---AAAC
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     4038  7 +     22540 TG-A---AAAC
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7123905  7 +  13083262 GG-A---AAAC
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_1884019                                   1098  7 -      2196 GG-A---AAAC
i Indri_indri.k141_1884019                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               7153  5 +     17520 GG-A---AA--
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8563446  7 +  11848649 AG-A---ATAC
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               21979  5 +     37189 GG-A---AA--
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          47882  7 -    147782 GG-A---AAAC
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   111894  6 -    115756 GA-A----AAC
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258404917  7 - 285822530 GG-A---AAAC
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        21789  7 +     39228 GG-A---AAAC
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            51162  7 +     63517 GG-A---AAAC
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        76404  7 +    116806 GG-A---AAAC
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     29427  7 -     33031 GG-A---AAAC
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3083683  7 -   3498232 GG-A---AAAC
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    10893  7 +     22452 GG-A---AAAC
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            134311  5 +   3060487 GG-A---AC--
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19245515  7 +  19376315 GG-A---AAAC
i Lophocebus_aterrimus.ctg55                            T 1238 C 0
s Loris_lydekkerianus.k141_550999                            8529 10 +     84689 GG-AGGAAAAC
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3776280 10 +   6799190 GG-AGGAAAAC
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20589170  7 -  62548349 GG-A---AAAC
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11085044  7 +  39895028 GG-A---AAAC
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             17201  7 +     74745 GG-A---AAAC
i Macaca_arctoides.k141_2201161                         T 1241 C 0
s Macaca_assamensis.Contig65                             12703707  7 +  12821369 GG-A---AAAC
i Macaca_assamensis.Contig65                            T 1252 C 0
s Macaca_cyclopis.k119_893486                                 604  7 -      3136 GG-A---AAAC
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           44105  7 +     63263 GG-A---AAAC
i Macaca_fascicularis.k141_155037                       T 1250 C 0
s Macaca_fuscata.k119_925451                                  121  7 +     10231 GG-A---AAAC
i Macaca_fuscata.k119_925451                            T 618 C 0
s Macaca_leonina.k141_3421209                                2254  7 +      3017 GG-A---AAAC
i Macaca_leonina.k141_3421209                           I 35 C 0
s Macaca_maura.k141_251854                                  43866  7 -     79256 GG-A---AAAC
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196032784  7 + 196197964 GG-A---AAAC
i Macaca_mulatta.NC_041755.1                            T 1252 C 0
s Macaca_nemestrina.KQ004885.1                           11442890  7 +  11645122 GG-A---AAAC
i Macaca_nemestrina.KQ004885.1                          T 1251 C 0
s Macaca_nigra.k141_282495                                   2813  7 -     46448 GG-A---AAAC
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                2644  7 -      3617 GG-A---AAAC
i Macaca_radiata.k141_1580474                           I 35 C 0
s Macaca_siberu.k141_741907                                 12976  7 -     55006 GG-A---AAAC
i Macaca_siberu.k141_741907                             T 1251 C 0
s Macaca_silenus.Contig12                                43838013  7 +  43892939 GG-A---AAAC
i Macaca_silenus.Contig12                               T 1251 C 0
s Macaca_thibetana.k99_662710                               15514  7 -     24607 GG-A---AAAC
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               2818  7 -     27140 GG-A---AAAC
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                699929  7 +    802869 GA-A---AAAC
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43434675  7 -  43563597 GG-A---AAAC
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4447501  7 -   4543643 GG-A---AAAC
i Mandrillus_sphinx.Contig144                           T 1238 C 0
s Manis_javanica.JSZB01003966.1                            144422  7 +    252755 GG-A---AAAC
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             34494  7 +     58827 GG-A---AAAC
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36871745  7 +  64221397 GG-A---AAAC
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       62584  7 -    234502 GA-A---AAAC
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_146202             282  7 -      1999 GG-A---AAAC
i Mellivora_capensis.MelCap_flattened_line_146202       C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233                9855  7 +     15977 GG-A---ATAC
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1044638  7 -  26018355 GG-A---ATAC
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_183284                   2023  5 +      2166 GG-A---AA--
i Mesoplodon_bidens.MesBid_scaffold_183284              C 0 C 0
s Microcebus_murinus.CM007691.1                          16508037  7 +  47401472 GG-A---AAAC
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  29307  6 -     48017 GG-A----AAC
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               21005  7 -     32043 GA-A---AAAT
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22817756  7 -  98408828 GG-A---AAAC
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8207766  6 +  10048721 GG-A----AAC
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            32437  6 +     45743 GA-A----AAC
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2666161                        33334  7 +     34273 GG-A---AAAC
i Miopithecus_ogouensis.k141_2666161                    I 35 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         8988  7 -    104932 GG-A---AAAC
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     3442  7 +      8497 GG-A---AAAC
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 144748  5 +    154973 GG-A---AA--
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                159515  7 +    265003 GA-A---AAAT
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 2927  7 -      4346 GG-A---AAAC
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  142608  7 -    168139 GG-A---AAAC
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          17410  6 -    100666 GA-A----AAC
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70764269  7 +  92629107 GG-A---ATAC
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75487306  7 +  98207768 GG-A---ATAC
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67553477  7 +  89017189 GG-A---ATAC
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74328487  7 +  97876770 GG-A---ATAC
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              9030  7 +     98495 GG-G---AAAC
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4421853  7 -  28371801 GG-A---AAAC
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     87982  7 -    117718 TG-A---AAAC
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               965730  6 +   8389877 GA-A----AAC
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5017421  6 +   6462685 GA-A----AAC
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3463317  6 -   3747815 GA-A----AAC
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         8512  6 +     66751 GA-A----AAC
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3387  7 -      8794 GG-A---AAAC
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            108365  7 +    362372 GA-A---ATAC
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               5713  7 +     48152 GG-A---AAAC
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4482587  7 -  14209539 GG-A---AAAC
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3949360  5 -   4490290 gg-a---aa--
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  47632  7 +     94413 AA-A---AAAT
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1439838                            585  7 +      3718 GG-A---AAAC
i Nomascus_annamensis.k141_1439838                      C 0 I 33
s Nomascus_concolor.k141_49591                                808  7 +      2014 GG-A---AAAC
i Nomascus_concolor.k141_49591                          C 0 I 736
s Nomascus_gabriellae.k141_906566                            2136  7 -      2544 GG-A---AAAC
i Nomascus_gabriellae.k141_906566                       C 0 I 5
s Nomascus_siki_b.tarseq_80                             22612  7 -  18771707 GG-A---AAAC
i Nomascus_siki_b.tarseq_80                         T 737 I 772
s Nomascus_siki_a.k141_595747                                   361  7 +      4512 GG-A---AAAC
i Nomascus_siki_a.k141_595747                             C 0 I 736
s Nyctereutes_procyonoides.CAJHUB010000786.1                28037  7 +   3668941 GG-A---AAAC
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65564875 10 -  95554990 GG-AGGAAAAC
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            1720 10 +      6470 GG-AGGAAAAC
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65667245 10 +  89412551 GG-AGGAAAAC
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4993866  7 -  23139505 GG-A---AAAC
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3683454  7 +  10294119 tc-a---aaat
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             677243  7 -   3126709 GG-A---AAAC
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1078055  7 +   1425656 GG-A---AAAC
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         35210  7 +     78940 GG-A---AAAC
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  123031  6 +    145789 C--T---AAAC
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  34786  7 +     62360 GG-A---ATAA
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7223044  5 -   7562323 gg-a---aa--
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              41426  7 -     66828 GG-A---AAAC
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141873551  7 + 163896628 GG-A---AAAC
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      305376  7 -    505867 GG-A---AAAC
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       36869  7 +     38679 GG-A---AAAC
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18006311  7 -  38779656 GG-A---AAAC
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134075632  7 - 275406953 GG-A---AAAC
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      76846  7 +    140051 GG-A---AAAC
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127572364  7 - 205426864 GG-A---AAAC
i Pan_paniscus.CM003386.1                               C 0 I 742
s Pan_troglodytes.CM009241.2                            120149517  7 - 196562556 GG-A---AAAC
i Pan_troglodytes.CM009241.2                            C 0 I 742
s Panthera_onca.PanOnc_flattened_line_1615                  32071  7 +    295523 GG-A---AAAC
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3635804  7 +  18214204 GG-A---AAAC
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5025452  7 -   6340057 GG-A---AAAC
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1064493  7 -   1292953 GG-A---AAAC
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188153459  7 - 188283584 GG-A---AAAC
i Papio_anubis.CM001492.2                               T 1243 C 0
s Papio_cynocephalus.k141_883042                             3020  7 +      5367 GG-A---AAAC
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47510856  7 +  47705337 GG-A---AAAC
i Papio_hamadryas.Contig15                              T 1235 C 0
s Papio_kindae.k141_5458022                                 64833  7 -    104429 GG-A---AAAC
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    4601  7 +     14967 GG-A---AAAC
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_3762866                                35027  7 +     35859 GG-A---AAAC
i Papio_ursinus.k141_3762866                            I 35 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113371  7 -    135482 GG-A---AAAC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           2922  7 -     23713 GG-A---AAAC
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            22221  7 -     27972 GG-A---AAAC
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      40838  7 -     45160 GG-A---AAAC
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4947962  7 -   8017169 gg-a---ATAC
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    10143  7 -     36578 TG-A---AAAC
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            119661  5 -    122454 GG-A---AA--
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1497351                           2717  7 -      3310 GG-A---AAAC
i Piliocolobus_badius.k141_1497351                      C 0 C 0
s Piliocolobus_gordonorum.k141_902470                       22622  7 -     82327 GG-A---AAAC
i Piliocolobus_gordonorum.k141_902470                   C 0 C 0
s Piliocolobus_kirkii.k141_557609                           19369  7 +     19957 GG-A---AAAC
i Piliocolobus_kirkii.k141_557609                       I 93 I 5
s Piliocolobus_tephrosceles.PDMG02000036.1               26737383  7 +  26888534 GG-A---AAAC
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            95181  6 +    112873 GA-A----AAC
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             41365  7 -     61926 GG-A---AAAC
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        22794  7 +     78826 GG-A---AAAC
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              6745  7 -     15800 GG-A---AAAC
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                         9943  7 -     16101 GG-A---AAAC
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          3252  7 +      9673 GG-A---AAAC
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13472246  7 -  19735023 GG-A---AAAC
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           11154  7 -     31692 GG-A---AAAC
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           3729  5 +     21690 GG-A---AA--
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       20586  7 +     44506 GG-A---AAAC
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        20796  7 +     67491 GG-A---AAAC
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      11037  7 -     98129 GG-A---AAAC
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     20642  7 +    147771 GG-A---AAAC
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        20892  7 -     23762 GG-A---AAAC
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          1358  7 -     55515 GG-A---AAAC
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         20711  7 +    152463 GG-A---AAAC
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      7471  7 +      8943 GG-A---AAAC
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                         10431  7 +    134592 GG-A---AAAC
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          21021  7 -     75465 GG-A---AAAC
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              184909  7 -    373494 GG-A---AAAC
i Pongo_abelii.NDHI03003816.1                           C 0 I 739
s Pongo_pygmaeus.ctg62                                   19804816  7 +  19899266 GG-A---AAAC
i Pongo_pygmaeus.ctg62                                  C 0 I 1480
s Presbytis_comata.k141_672698                               2951  7 -     15069 GG-A---AAAC
i Presbytis_comata.k141_672698                          T 1260 C 0
s Presbytis_mitrata.k141_860013                              3085  7 +     14865 GG-A---AAAC
i Presbytis_mitrata.k141_860013                         T 1260 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                74257  7 +     78963 GG-A---AAAC
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6846293  7 +  12164890 GG-A---AAAC
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    664910  7 -   2312742 NN-N---NNNN
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         1437  7 +     11805 GG-A---AAAC
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           40771  7 +     52369 GG-A---AAAC
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         33160  7 -     44753 GG-A---AAAC
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            15081  7 +     27322 GG-A---AAAC
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       14720  7 -     53241 GG-A---AAAC
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         36992  7 -     48185 GG-A---AAAC
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           31394  7 +     77221 GG-A---ATAC
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            2186  7 -     27784 GA-A---AAAT
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        243946  7 -    344369 GG-A---AAAC
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13244309  7 -  17261082 GA-A---AAAC
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             602260  7 -   3946241 GA-A---AAAC
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131532034  7 - 161321710 GG-A---AAAC
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             27080  7 +     56732 GG-A---AAAC
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6803571  7 +   6970761 GG-A---AAAC
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             2964  7 +     18040 GG-A---AAAC
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                14133  7 +     68503 GG-A---AAAC
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13913370  7 +  90463843 GG-A---ATAC
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1786130  7 +   2252614 GA-A---AAAC
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_102124                           13517  7 -     14454 GG-A---AAAC
i Rhinopithecus_bieti.k119_102124                       I 35 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206374843  7 - 206558726 GG-A---AAAC
i Rhinopithecus_roxellana.NC_044549.1                   T 1256 C 0
s Rhinopithecus_strykeri.ctg4                            44853743  7 -  45163003 GG-A---AAAC
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                17602  7 +    109198 GA-A---AAAC
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       5939  6 +     12214 GG-A----AAC
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15670481  7 -  43202129 GG-A---AAAC
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        2347  7 +     34089 GG-A---AAAC
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              2288  7 -     60842 GG-A---AAAC
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              2383  7 +     67014 GG-A---AAAC
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              2361  7 +     60816 GG-A---AAAC
i Saimiri_sciureus.k141_1947592                         T 703 C 0
s Saimiri_ustus.k141_1282476                                 2298  7 -     76454 GG-A---AAAC
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17339032  7 -  30362882 GG-A---AAAC
i Sapajus_apella.ctg10                                  C 0 I 724
s Sapajus_macrocephalus.k141_966464                         18407  7 -     62485 GG-A---AAAC
i Sapajus_macrocephalus.k141_966464                     C 0 I 724
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   29692  7 -    114521 GG-A---AAAC
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1527475                       25505  7 +     26421 GG-A---AAAC
i Semnopithecus_entellus.k141_1527475                   I 35 C 0
s Semnopithecus_hypoleucos.k141_761524                       5965  7 +     20762 GG-A---AAAC
i Semnopithecus_hypoleucos.k141_761524                  T 1258 C 0
s Semnopithecus_johnii.k141_1351450                         39700  7 +     40653 GG-A---AAAC
i Semnopithecus_johnii.k141_1351450                     I 35 C 0
s Semnopithecus_priam.k141_410937                           36012  7 +     46263 GG-A---AAAC
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     29127  7 +     42640 GG-A---AAAC
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         32698  7 -     33692 GG-A---AAAC
i Semnopithecus_vetulus.k141_642050                     I 35 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   97583  7 -    120886 GG-A---ATAC
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            16331  7 +    739146 GG-A---AGAC
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17748547  2 -  27805282 --------AA-
i Sorex_araneus.JH798170.1                              I 1 C 0
s Spermophilus_dauricus.KZ294190.1                        2237821  7 +   2842873 GG-A---AAAC
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             232706  7 -    276980 GG-A---AAAC
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            25274  7 +     62062 GG-A---AAAC
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189270183  7 + 218635234 GA-A---AAAC
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                     13899972  7 +  13920577 GG-A---AAAC
i Symphalangus_syndactylus.tarseq_24                    C 0 I 5
s Tadarida_brasiliensis.TadBra_scaffold_145589               4129  7 -      6213 GA-A---AAAC
i Tadarida_brasiliensis.TadBra_scaffold_145589          I 35 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               13061  7 +     45698 GG-A---AAAC
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      805050  7 +   1148477 GG-A---AAAC
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  55711  7 +     99546 GG-A---AAAC
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               24365  7 +     42269 GG-A---AAAC
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               57681  7 +     65473 GG-A---AAAC
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194004995  7 - 194193292 GG-A---AAAC
i Theropithecus_gelada.CM009951.1                       T 1235 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             37200  7 -     47444 TG-A---AAAC
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  1945  7 +      6782 GG-A---AAAC
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  134196  7 -    259118 GA-A---AAAT
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        24075  7 +     38948 GG-A---AAAC
i Trachypithecus_auratus.k141_738098                    T 1258 C 0
s Trachypithecus_crepusculus.k141_1588528                   17802  7 -     32910 GG-A---AAAC
i Trachypithecus_crepusculus.k141_1588528               T 1258 C 0
s Trachypithecus_cristatus.k141_27198                       23700  7 +     24652 GG-A---AAAC
i Trachypithecus_cristatus.k141_27198                   I 35 C 0
s Trachypithecus_francoisi.k141_1178450                      2578  7 -      3559 GG-A---AAAC
i Trachypithecus_francoisi.k141_1178450                 I 35 C 0
s Trachypithecus_geei.k141_670367                           40524  7 -     54611 GG-A---AAAC
i Trachypithecus_geei.k141_670367                       T 1256 C 0
s Trachypithecus_germaini.k141_878600                         610  7 +      1165 GG-A---AAAC
i Trachypithecus_germaini.k141_878600                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     1758  7 -     15592 GG-A---AAAC
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                           415  7 +     14371 GG-A---AAAC
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  48914  7 +     51589 GG-A---AAAC
i Trachypithecus_leucocephalus.k141_283605              T 1258 C 0
s Trachypithecus_melamera.k141_238507                       12090  7 +     14732 GG-A---AAAC
i Trachypithecus_melamera.k141_238507                   T 1258 C 0
s Trachypithecus_obscurus.k141_1115109                       2567  7 -     28054 GG-A---AAAC
i Trachypithecus_obscurus.k141_1115109                  T 1258 C 0
s Trachypithecus_phayrei.ctg3                            44657362  7 -  44834318 GG-A---AAAC
i Trachypithecus_phayrei.ctg3                           T 1258 C 0
s Trachypithecus_pileatus.k141_469329                        2372  7 +      3372 GG-A---AAAC
i Trachypithecus_pileatus.k141_469329                   I 49 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   3539  7 +     90398 GG-A---AAAC
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16079634  7 +  31416278 GG-A---AAAC
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2790038  7 -   3938065 GG-a---aaac
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    2558  7 +     13056 GG-A---AAAC
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69311763  5 -  96451834 gg-a---aa--
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 24880  7 -     25548 GG-A---AAAC
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 C 0
s Ursus_maritimus.KK498671.1                              6512498  7 +  28682327 GG-A---AAAC
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  3134  7 -     20643 GG-A---AAAC
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             22678  7 -     33872 GG-A---AAAC
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1522992  7 -   2331223 GG-A---AAAC
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                135444  7 -    281493 GG-A---AAAC
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       124919  7 -    134049 GG-A---AAAC
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        211973  7 -    227762 GG-A---AAAC
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     13156  7 -     20485 AG-A---ATAC
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           5259  5 -      8775 GG-A---AA--
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Echinops_telfairi.JH980316.1                           22994071  0 -  44670279 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               10370 4 +    209709 aaag
s Acinonyx_jubatus.LLWD01000356.1                         2031701 4 +   3721120 AAAG
i Acinonyx_jubatus.LLWD01000356.1                       C 0 I 1
s Acomys_cahirinus.AcoCah_scaffold_1625                    110284 4 -    189883 AAAG
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 I 1
s Ailuropoda_melanoleuca.LNAT01000321.1                  10655019 4 +  23371972 AAAG
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 I 1
s Ailurus_fulgens.LNAC01000003.1                          7091746 4 -  16596857 AAAG
i Ailurus_fulgens.LNAC01000003.1                        C 0 I 1
s Allactaga_bullata.AllBul_scaffold_70162                   10713 4 -     22067 AAAG
i Allactaga_bullata.AllBul_scaffold_70162               C 0 I 1
s Allenopithecus_nigroviridis.k141_3103728                    972 4 +      1665 AAAG
i Allenopithecus_nigroviridis.k141_3103728              I 7 C 0
s Allochrocebus_lhoesti.k141_4825038                        52450 4 +     53391 AAAG
i Allochrocebus_lhoesti.k141_4825038                    C 0 I 1
s Allochrocebus_preussi.k141_1202907                         3175 4 +     72529 AAAG
i Allochrocebus_preussi.k141_1202907                    C 0 I 29
s Allochrocebus_solatus.k141_787528                          2750 4 +      3797 AAAG
i Allochrocebus_solatus.k141_787528                     C 0 I 1
s Alouatta_belzebul.k141_1818029                             7923 4 -     18050 AAAG
i Alouatta_belzebul.k141_1818029                        C 0 I 1
s Alouatta_caraya.k141_5460                                  9036 4 -     11521 AAAG
i Alouatta_caraya.k141_5460                             C 0 I 1
s Alouatta_discolor.k141_811576                              8600 4 -     21359 AAAG
i Alouatta_discolor.k141_811576                         C 0 I 1
s Alouatta_juara.k141_298055                                  605 4 +      1823 AAAG
i Alouatta_juara.k141_298055                            C 0 I 28
s Alouatta_macconnelli.k141_1331706                          7891 4 -     10438 AAAG
i Alouatta_macconnelli.k141_1331706                     C 0 I 1
s Alouatta_nigerrima.k141_2718643                            4547 4 +      7047 AAAG
i Alouatta_nigerrima.k141_2718643                       C 0 I 1
s Alouatta_palliata.k141_1316127                             7833 4 +     10410 AAAG
i Alouatta_palliata.k141_1316127                        T 713 I 1
s Alouatta_puruensis.k141_1284840                            1636 4 -      4927 AAAG
i Alouatta_puruensis.k141_1284840                       C 0 I 1
s Alouatta_seniculus.k141_990213                             4566 4 +      6429 AAAG
i Alouatta_seniculus.k141_990213                        C 0 I 1
s Ammotragus_lervia.NIVO01013474.1                        3518470 4 +   4113121 AAGG
i Ammotragus_lervia.NIVO01013474.1                      C 0 I 1
s Anoura_caudifer.AnoCau_scaffold_422                      388641 4 -    631301 AAAG
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 I 1
s Antilocapra_americana.AntAmePen_scaffold_42841            29070 4 +     33004 AAAG
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 I 1
s Aotus_azarae.k141_3170768                                 60286 4 +     78111 AAAG
i Aotus_azarae.k141_3170768                             C 0 I 1
s Aotus_griseimembra.k141_3275623                            3224 4 +     22701 AAAG
i Aotus_griseimembra.k141_3275623                       C 0 I 1
s Aotus_nancymaae.KZ196176.1                              5747182 4 +   9889416 AAAG
i Aotus_nancymaae.KZ196176.1                            C 0 I 1
s Aotus_trivirgatus.k141_1740727                             3767 4 -    104377 AAAG
i Aotus_trivirgatus.k141_1740727                        C 0 I 1
s Aotus_vociferans.k141_718647                               3773 4 +     23246 AAAG
i Aotus_vociferans.k141_718647                          C 0 I 1
s Aplodontia_rufa.AprRuf_scaffold_156013                     1789 4 +      5067 AAAG
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 I 1
s Arctocebus_calabarensis.k141_1161114                      15736 4 +     17483 AAAG
i Arctocebus_calabarensis.k141_1161114                  C 0 I 1
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 7036 4 -     29036 AAAG
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 I 1
s Ateles_geoffroyi_b.tarseq_2582                             9537035 4 +  39197703 AAAG
i Ateles_geoffroyi_b.tarseq_2582                           C 0 I 1
s Ateles_belzebuth.k141_1348307                             58319 4 +     85812 AAAG
i Ateles_belzebuth.k141_1348307                         C 0 I 1
s Ateles_chamek.k141_1072810                                 9318 4 +     89302 AAAG
i Ateles_chamek.k141_1072810                            C 0 I 1
s Ateles_geoffroyi_a.k141_1300742                             13823 4 -     58268 AAAG
i Ateles_geoffroyi_a.k141_1300742                         C 0 I 1
s Ateles_marginatus.k141_899112                             61814 4 +    119057 AAAG
i Ateles_marginatus.k141_899112                         C 0 I 1
s Ateles_paniscus.k141_1631200                               3765 4 -     25888 AAAG
i Ateles_paniscus.k141_1631200                          C 0 I 1
s Avahi_laniger.k141_2840928                                 4517 4 -     16375 AAAG
i Avahi_laniger.k141_2840928                            C 0 I 1
s Avahi_peyrierasi.k141_2689020                               837 4 +      2719 AAAG
i Avahi_peyrierasi.k141_2689020                         C 0 I 1
s Balaenoptera_acutorostrata.KI537095.1                  26378485 3 +  51448160 -taa
i Balaenoptera_acutorostrata.KI537095.1                 C 0 I 1
s Balaenoptera_bonaerensis.DF502048.1                        3716 3 -     13118 -taa
i Balaenoptera_bonaerensis.DF502048.1                   C 0 I 1
s Beatragus_hunteri.BeaHun_scaffold_21644                   41565 4 -     72089 AAAG
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 I 1
s Bison_bison.KN264915.1                                  6557576 4 +   6870073 AAAG
i Bison_bison.KN264915.1                                C 0 I 1
s Bos_indicus.CM003021.1                                138137815 4 - 161108492 AAAG
i Bos_indicus.CM003021.1                                C 0 I 1
s Bos_mutus.JH883513.1                                     570189 4 -    998990 AAAG
i Bos_mutus.JH883513.1                                  C 0 I 1
s Bos_taurus.CM000177.6                                 136293548 4 - 158972876 AAAG
i Bos_taurus.CM000177.6                                 C 0 I 1
s Bubalus_bubalis.KI419065.1                              1229304 4 -   1914593 AAAG
i Bubalus_bubalis.KI419065.1                            C 0 I 1
s Cacajao_ayresi.k141_724503                               111658 4 -    171031 AAAG
i Cacajao_ayresi.k141_724503                            C 0 I 1
s Cacajao_calvus.k141_96166                                 10684 4 +    125063 AAAG
i Cacajao_calvus.k141_96166                             C 0 I 1
s Cacajao_hosomi.k141_303789                                12732 4 -    216513 AAAG
i Cacajao_hosomi.k141_303789                            C 0 I 1
s Cacajao_melanocephalus.k141_1160263                        5272 4 -    134917 AAAG
i Cacajao_melanocephalus.k141_1160263                   C 0 I 1
s Camelus_bactrianus.KN276303.1                           3217889 4 -   8989139 AAAG
i Camelus_bactrianus.KN276303.1                         C 0 I 1
s Camelus_dromedarius.KN271192.1                           395593 4 -  15254737 AAAG
i Camelus_dromedarius.KN271192.1                        C 0 I 1
s Camelus_ferus.KB016973.1                                2971327 4 +   6889770 AAAG
i Camelus_ferus.KB016973.1                              C 0 I 1
s CanFam4.chr31                                          11516405 4 +  39901454 AAAG
i CanFam4.chr31                                         C 0 I 1
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   11423 4 +     87036 AAAG
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 I 1
s Canis_lupus_dingo.QKWQ01001993.1                       11263066 4 -  35597290 AAAG
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 I 1
s Canis_lupus_familiaris.chr31                           11085595 4 +  39895921 AAAG
i Canis_lupus_familiaris.chr31                          C 0 I 1
s Canis_lupus_orion.HG994411.1                           16452619 4 -  44759192 AAAG
i Canis_lupus_orion.HG994411.1                          C 0 I 1
s Capra_aegagrus.CM003214.1                              21323574 4 + 157394656 AAAG
i Capra_aegagrus.CM003214.1                             C 0 I 1
s Capra_hircus.CM004562.1                               135704801 4 - 157403528 AAAG
i Capra_hircus.CM004562.1                               C 0 I 1
s Capromys_pilorides.CapPil_scaffold_1557951                  354 4 +       644 AAAG
i Capromys_pilorides.CapPil_scaffold_1557951            C 0 I 1
s Carlito_syrichta.NW_007248099.1                          306889 4 +    345090 AAGG
i Carlito_syrichta.NW_007248099.1                       C 0 I 1
s Carollia_perspicillata.CarPer_scaffold_4436               57835 4 +     67245 AAAG
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 I 1
s Castor_canadensis.CasCan_scaffold_47037                   28321 4 +     33760 AATG
i Castor_canadensis.CasCan_scaffold_47037               C 0 I 1
s Catagonus_wagneri.CatWag_scaffold_1305                   157133 4 -    276539 AAAG
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 I 1
s Cavia_aperea.AVPZ01000278.1                            15784495 4 -  24422027 AAAG
i Cavia_aperea.AVPZ01000278.1                           C 0 I 1
s Cavia_porcellus.DS562889.1                             15796427 4 -  24440124 AAAG
i Cavia_porcellus.DS562889.1                            C 0 I 1
s Cavia_tschudii.CavTsc_scaffold_488                       174618 4 +    436027 AAAG
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 I 1
s Cebus_albifrons.Contig22                               18889236 4 -  29618158 AAAG
i Cebus_albifrons.Contig22                              I 725 T 724
s Cebus_olivaceus.k141_93739                                 6780 4 -     26817 AAAG
i Cebus_olivaceus.k141_93739                            I 725 T 724
s Cebus_unicolor.k141_239009                                11020 4 +     25043 AAAG
i Cebus_unicolor.k141_239009                            I 725 T 724
s Cephalopachus_bancanus.k141_702587                         5925 4 +     21754 AAGG
i Cephalopachus_bancanus.k141_702587                    C 0 I 1
s Ceratotherium_simum.JH767818.1                          4361613 4 +   7569818 AAAG
i Ceratotherium_simum.JH767818.1                        C 0 I 1
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         1368 4 -      9338 AAAG
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 I 1
s Cercocebus_atys.KQ010443.1                              6552434 4 +   6739814 AAAG
i Cercocebus_atys.KQ010443.1                            C 0 I 1237
s Cercocebus_chrysogaster.k141_2328246                      25148 4 +     60454 AAAG
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                           353 4 -     21101 AAAG
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         56426 4 -    107033 AAAG
i Cercocebus_torquatus.k141_3969582                     C 0 I 1237
s Cercopithecus_ascanius.k141_4123525                         557 4 -     17608 AAAG
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          26804 4 +     30494 AAAG
i Cercopithecus_cephus.k141_598190                      C 0 I 1251
s Cercopithecus_diana.k141_1490386                           2828 4 -      4022 AAAG
i Cercopithecus_diana.k141_1490386                      C 0 I 1
s Cercopithecus_hamlyni.k141_381099                          2720 4 -      3505 AAAG
i Cercopithecus_hamlyni.k141_381099                     C 0 I 1
s Cercopithecus_lowei.k141_623764                           21510 4 +     35983 AAAG
i Cercopithecus_lowei.k141_623764                       C 0 I 1247
s Cercopithecus_albogularis.ctg51                              11988047 4 +  12117833 AAAG
i Cercopithecus_albogularis.ctg51                             T 1241 I 1241
s Cercopithecus_mona.ctg12                               46474800 4 +  46592721 AAAG
i Cercopithecus_mona.ctg12                              C 0 I 1243
s Cercopithecus_neglectus.k141_2078027                      39594 4 -     45581 AAAG
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                        603 4 +     35577 AAAG
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                         376 4 -     25661 AAAG
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_1977419                        3449 4 -      4411 AAAG
i Cercopithecus_pogonias.k141_1977419                   C 0 I 1
s Cercopithecus_roloway.k141_2263608                        19963 4 +     37128 AAAG
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_1070855          1192 4 -      1715 AAAG
i Chaetophractus_vellerosus.ChaVel_scaffold_1070855     C 0 I 1
s Cheirogaleus_major.k141_1157592                           56822 4 -     68416 AAAG
i Cheirogaleus_major.k141_1157592                       C 0 I 1
s Cheirogaleus_medius.k141_133808                            5864 4 +     13308 AAAG
i Cheirogaleus_medius.k141_133808                       C 0 I 1
s Cheracebus_lucifer.k141_619653                             3328 4 -     18223 AAAG
i Cheracebus_lucifer.k141_619653                        C 0 I 1
s Cheracebus_lugens.k141_203936                             20351 4 +     25473 AAAG
i Cheracebus_lugens.k141_203936                         C 0 I 1
s Cheracebus_regulus.k141_2128895                           39390 4 +     57117 AAAG
i Cheracebus_regulus.k141_2128895                       C 0 I 1
s Cheracebus_torquatus.k141_315545                          44065 4 +     54541 AAAG
i Cheracebus_torquatus.k141_315545                      C 0 I 1
s Chinchilla_lanigera.JH721867.1                         15959660 4 +  43084221 AAAG
i Chinchilla_lanigera.JH721867.1                        C 0 I 1
s Chiropotes_israelita.k141_1189915                         68880 4 +    196370 AAAG
i Chiropotes_israelita.k141_1189915                     C 0 I 1
s Chiropotes_sagulatus.k141_773804                          13060 4 +     40510 AAAG
i Chiropotes_sagulatus.k141_773804                      C 0 I 1
s Chlorocebus_aethiops.ctg22                             15136261 4 -  15256731 AAAG
i Chlorocebus_aethiops.ctg22                            C 0 I 1257
s Chlorocebus_pygerythrus.k141_1486215                      31307 4 -     53260 AAAG
i Chlorocebus_pygerythrus.k141_1486215                  C 0 I 1258
s Chlorocebus_sabaeus.CM001963.2                        101141756 4 + 101219884 AAAG
i Chlorocebus_sabaeus.CM001963.2                        C 0 I 1372
s Choloepus_didactylus.ChoDid_scaffold_36182                14792 4 -     21363 AAAG
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 I 1
s Choloepus_hoffmanni.KN194586.1                           760103 4 +    964067 AAAG
i Choloepus_hoffmanni.KN194586.1                        C 0 I 1
s Chrysochloris_asiatica.ChrAsi_scaffold_141308              6903 4 -     12508 AAAG
i Chrysochloris_asiatica.ChrAsi_scaffold_141308         C 0 I 1
s Colobus_angolensis.KN985967.1                          10880335 4 +  10971483 AAAG
i Colobus_angolensis.KN985967.1                         C 0 I 4556
s Colobus_guereza.LG08                                  147661493 4 + 156195979 AAAG
i Colobus_guereza.LG08                                  C 0 I 1562
s Colobus_polykomos.k141_1406057                            13480 4 +     23629 AAAG
i Colobus_polykomos.k141_1406057                        C 0 I 1559
s Condylura_cristata.JH655880.1                          60611093 4 +  78930452 AAAG
i Condylura_cristata.JH655880.1                         C 0 I 1
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         37551 4 -     40477 AAAG
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 I 1
s Cricetomys_gambianus.CriGam_scaffold_949                 275373 4 -    399297 AAAG
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 I 1
s Cricetulus_griseus.LT883672.1                          53026905 4 +  72327488 AAAG
i Cricetulus_griseus.LT883672.1                         C 0 I 1
s Crocidura_indochinensis.CroInd_scaffold_38409             18030 4 -     19186 AAAA
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 I 1
s Cryptoprocta_ferox.CryFer_flattened_line_19014            49713 4 -     70449 AAAG
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 I 1
s Ctenodactylus_gundi.CteGun_scaffold_447                  206070 4 -    956709 AGAG
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 I 1
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 28439 4 -     67205 AAAG
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 I 1
s Cuniculus_paca.CunPac_flattened_line_16637                15267 4 +     26546 AGAG
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 I 1
s Dasyprocta_punctata.DasPun_flattened_line_634             56750 4 -    236241 AAAG
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 I 1
s Dasypus_novemcinctus.JH568778.1                          180002 4 -   6883506 AAAG
i Dasypus_novemcinctus.JH568778.1                       C 0 I 1
s Daubentonia_madagascariensis.ctg11                     16842690 4 +  31942871 AAAG
i Daubentonia_madagascariensis.ctg11                    C 0 I 1
s Delphinapterus_leucas.KZ290064.1                       80035169 3 -  96802777 -taa
i Delphinapterus_leucas.KZ290064.1                      C 0 I 1
s Desmodus_rotundus.KZ672188.1                           18697145 4 -  18957592 aaag
i Desmodus_rotundus.KZ672188.1                          C 0 I 1
s Dicerorhinus_sumatrensis.PEKH010003161.1                 320271 4 +    993696 AAAG
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 I 1
s Diceros_bicornis.DicBicMic_scaffold_9545                    915 4 +    151128 AAAG
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 I 1
s Dinomys_branickii.DinBra_scaffold_1996                   155543 4 +    228994 AAAG
i Dinomys_branickii.DinBra_scaffold_1996                C 0 I 1
s Dipodomys_ordii.KN672545.1                              3653292 4 +   4240102 AATA
i Dipodomys_ordii.KN672545.1                            C 0 I 1
s Dipodomys_stephensi.DipSte_scaffold_44365                 24849 3 +     28912 AAT-
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                34011 4 -     73477 AAAG
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 I 1
s Eidolon_helvum.KE772537.1                                 10518 4 +     24177 AAAG
i Eidolon_helvum.KE772537.1                             C 0 I 1
s Elaphurus_davidianus.JRFZ01086400.1                     1489832 4 +   1727528 AAAG
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 I 1
s Elephantulus_edwardii.JH947210.1                        7804584 4 +  15467074 AAAG
i Elephantulus_edwardii.JH947210.1                      C 0 I 1
s Ellobius_lutescens.LOEQ01003611.1                        237563 4 -    369425 AAAG
i Ellobius_lutescens.LOEQ01003611.1                     C 0 I 1
s Ellobius_talpinus.LOJH01090055.1                           4576 4 -      7838 AAAG
i Ellobius_talpinus.LOJH01090055.1                      C 0 I 1
s Enhydra_lutris.KZ291749.1                              85869478 4 +  99434291 AAAG
i Enhydra_lutris.KZ291749.1                             C 0 I 1
s Eptesicus_fuscus.JH977687.1                             4702106 4 +   6522550 AAAG
i Eptesicus_fuscus.JH977687.1                           C 0 I 1
s Equus_asinus.JREZ01000062.1                             5851006 4 -   7175178 AAAG
i Equus_asinus.JREZ01000062.1                           C 0 I 1
s Equus_caballus.CM000402.2                              13349508 4 +  41866177 AAAG
i Equus_caballus.CM000402.2                             C 0 I 1
s Equus_przewalskii.ATBW01073585.1                          10998 4 +     92910 AAAG
i Equus_przewalskii.ATBW01073585.1                      C 0 I 1
s Erinaceus_europaeus.JH835290.1                         11530795 4 +  16010500 AAAG
i Erinaceus_europaeus.JH835290.1                        C 0 I 1
s Erythrocebus_patas.Contig8                             48768439 4 -  48907691 AAAG
i Erythrocebus_patas.Contig8                            C 0 I 1259
s Eschrichtius_robustus.EscRob_flattened_line_685          313371 3 +    330699 -TAT
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 I 1
s Eubalaena_japonica.EubJap_flattened_line_7756             59801 3 +     89355 -TAA
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 I 1
s Eulemur_albifrons.k141_715837                              2869 4 +     13586 AAAG
i Eulemur_albifrons.k141_715837                         C 0 I 1
s Eulemur_collaris.k141_311830                               2804 4 -      6809 AAAG
i Eulemur_collaris.k141_311830                          C 0 I 1
s Eulemur_coronatus.k141_3240342                             9280 4 +     36558 AAAG
i Eulemur_coronatus.k141_3240342                        C 0 I 1
s Eulemur_flavifrons.k141_903901                             5594 4 +     60246 AAAG
i Eulemur_flavifrons.k141_903901                        C 0 I 1
s Eulemur_fulvus.k141_653297                                 9077 4 +    109717 AAAG
i Eulemur_fulvus.k141_653297                            C 0 I 1
s Eulemur_macaco.k141_1341545                               13456 4 +     16540 AAAG
i Eulemur_macaco.k141_1341545                           C 0 I 1
s Eulemur_mongoz.k141_825972                                13732 4 +     27497 AAAG
i Eulemur_mongoz.k141_825972                            C 0 I 1
s Eulemur_rubriventer.k141_411740                           16198 4 +     26808 AAAG
i Eulemur_rubriventer.k141_411740                       C 0 I 1
s Eulemur_rufus.k141_1620292                                30922 4 +     46535 AAAG
i Eulemur_rufus.k141_1620292                            C 0 I 1
s Eulemur_sanfordi.k141_186399                              13645 4 -     29447 AAAG
i Eulemur_sanfordi.k141_186399                          C 0 I 1
s Felis_catus.CM001386.2                                129890677 4 - 159252932 AAAG
i Felis_catus.CM001386.2                                C 0 I 1
s Felis_catus_fca126.CM031420.1                         129277752 4 - 158578461 AAAG
i Felis_catus_fca126.CM031420.1                         C 0 I 1
s Felis_nigripes.FelNig_flattened_line_8080                 18887 4 +     52776 AAAG
i Felis_nigripes.FelNig_flattened_line_8080             C 0 I 1
s Fukomys_damarensis.KN123630.1                          13890609 4 -  19261668 AAAG
i Fukomys_damarensis.KN123630.1                         C 0 I 1
s Galago_moholi.ctg555                                     208788 4 -    847004 AAAG
i Galago_moholi.ctg555                                  C 0 I 1
s Galago_senegalensis.k141_964197                           11169 4 -     43889 AAAG
i Galago_senegalensis.k141_964197                       C 0 I 1
s Galagoides_demidoff.k141_1769638                           8233 4 +     27357 AAAG
i Galagoides_demidoff.k141_1769638                      C 0 I 1
s Galeopterus_variegatus.GalVar_scaffold_354               154147 4 +    324696 AAAG
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 I 1
s Giraffa_tippelskirchi.LVKQ01S012154.1                    179347 4 -    189561 AAAG
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 I 1
s Glis_glis.GliGli_scaffold_79770                           10554 4 -     18683 AAAG
i Glis_glis.GliGli_scaffold_79770                       C 0 I 1
s Gorilla_beringei.k141_111300                               3770 4 -     14630 AAAG
i Gorilla_beringei.k141_111300                          I 1 C 0
s Gorilla_gorilla.LT578340.1                            119650869 4 - 195582420 aaag
i Gorilla_gorilla.LT578340.1                            I 1 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   75083 4 +    118900 AAAG
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 I 1
s Hapalemur_alaotrensis.k141_1198205                         3429 4 +      3980 AAAG
i Hapalemur_alaotrensis.k141_1198205                    C 0 I 1
s Hapalemur_gilberti.k141_97962                             25904 4 +     26611 AAAG
i Hapalemur_gilberti.k141_97962                         C 0 I 1
s Hapalemur_griseus.k141_1387522                             3366 4 +     56096 AAAG
i Hapalemur_griseus.k141_1387522                        C 0 I 1
s Hapalemur_meridionalis.k141_186231                        26641 4 -     42470 AAAG
i Hapalemur_meridionalis.k141_186231                    C 0 I 1
s Hapalemur_occidentalis.k141_797938                        43235 4 -     54384 AAAG
i Hapalemur_occidentalis.k141_797938                    C 0 I 1
s Helogale_parvula.HelPar_flattened_line_22962              14922 4 +     53719 AAAG
i Helogale_parvula.HelPar_flattened_line_22962          C 0 I 1
s Hemitragus_hylocrius.HemHyl_scaffold_16669                25846 4 -     91191 AAAG
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 I 1
s Heterocephalus_glaber.JH602058.1                        2548995 4 +  31725842 AAAG
i Heterocephalus_glaber.JH602058.1                      C 0 I 1
s Heterohyrax_brucei.HetBruBak_scaffold_25354               54400 4 +     73687 AAAG
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 I 1
s Hippopotamus_amphibius.HipAmp_scaffold_1308              145411 4 +    277961 AAAG
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 I 1
s Hipposideros_armiger.JXIK01001085.1                      276750 4 -    477199 AAAG
i Hipposideros_armiger.JXIK01001085.1                   C 0 I 1
s Hipposideros_galeritus.HipGal_scaffold_104691              5908 4 -      9143 AAAG
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 I 1
s Hoolock_leuconedys.ctg2405                                   13801 4 -     15084 AAAG
i Hoolock_leuconedys.ctg2405                               I 56 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 13975 4 -     67322 AAAG
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 I 1
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16912 4 -    119109 AAAG
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 I 1
s Hylobates_abbotti.k141_493872                              2844 4 +      5897 AAAA
i Hylobates_abbotti.k141_493872                         C 0 I 1
s Hylobates_agilis.k141_1485652                              1265 4 -      1697 AAAA
i Hylobates_agilis.k141_1485652                         C 0 I 1
s Hylobates_klossii.k141_466549                              9289 4 +     11537 AAAA
i Hylobates_klossii.k141_466549                         C 0 I 1
s Hylobates_pileatus_b.ContigUN                                 14622390 4 -  25970782 AAAA
i Hylobates_pileatus_b.ContigUN                                C 0 I 1
s Hylobates_muelleri.k141_1133650                            2279 4 -      2775 AAAA
i Hylobates_muelleri.k141_1133650                       C 0 I 1
s Hylobates_pileatus_a.tarseq_592                             30883 4 -     60944 AAAA
i Hylobates_pileatus_a.tarseq_592                         C 0 I 1
s Hystrix_cristata.HysCri_scaffold_50788                     4045 4 +     22540 AAAG
i Hystrix_cristata.HysCri_scaffold_50788                C 0 I 1
s Ictidomys_tridecemlineatus.JH393315.1                   7123912 4 +  13083262 AAAG
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 I 1
s Indri_indri.k141_1884019                                   1105 4 -      2196 AAAG
i Indri_indri.k141_1884019                              C 0 I 1
s Inia_geoffrensis.IniGeo_flattened_line_66725               7158 3 +     17520 -TAA
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 I 1
s Jaculus_jaculus.JH725517.1                              8563453 4 +  11848649 AAAG
i Jaculus_jaculus.JH725517.1                            C 0 I 1
s Kogia_breviceps.KogBre_flattened_line_35920               21984 3 +     37189 -TAA
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 I 1
s Lagothrix_lagothricha.k141_12968                          47889 4 -    147782 AAAG
i Lagothrix_lagothricha.k141_12968                      C 0 I 1
s Lasiurus_borealis.LasBor_scaffold_5102                   111900 4 -    115756 AAAG
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 I 1
s Lemur_catta.scaffold_1                                258404924 4 - 285822530 AAAG
i Lemur_catta.scaffold_1                                C 0 I 1
s Lepilemur_ankaranensis.k141_884009                        21796 4 +     39228 AAAG
i Lepilemur_ankaranensis.k141_884009                    C 0 I 1
s Lepilemur_dorsalis.k141_134267                            51169 4 +     63517 AAAG
i Lepilemur_dorsalis.k141_134267                        C 0 I 1
s Lepilemur_ruficaudatus.k141_617879                        76411 4 +    116806 AAAG
i Lepilemur_ruficaudatus.k141_617879                    C 0 I 1
s Lepilemur_septentrionalis.k141_578524                     29434 4 -     33031 AAAG
i Lepilemur_septentrionalis.k141_578524                 C 0 I 1
s Leptonychotes_weddellii.KB714749.1                      3083690 4 -   3498232 AAAG
i Leptonychotes_weddellii.KB714749.1                    C 0 I 1
s Lepus_americanus.LepAme_scaffold_62849                    10900 4 +     22452 AAAG
i Lepus_americanus.LepAme_scaffold_62849                C 0 I 1
s Lipotes_vexillifer.KE558548.1                            134316 3 +   3060487 -TAA
i Lipotes_vexillifer.KE558548.1                         C 0 I 1
s Lophocebus_aterrimus.ctg55                             19245522 4 +  19376315 AAAG
i Lophocebus_aterrimus.ctg55                            C 0 I 1238
s Loris_lydekkerianus.k141_550999                            8539 4 +     84689 AAAG
i Loris_lydekkerianus.k141_550999                       C 0 I 1
s Loris_tardigradus.ctg97                                 3776290 4 +   6799190 AAAG
i Loris_tardigradus.ctg97                               C 0 I 1
s Loxodonta_africana.GL010040.1                          20589177 4 -  62548349 AAAG
i Loxodonta_africana.GL010040.1                         C 0 I 1
s Lycaon_pictus.CM007556.1                               11085051 4 +  39895028 AAAG
i Lycaon_pictus.CM007556.1                              C 0 I 1
s Macaca_arctoides.k141_2201161                             17208 4 +     74745 AAAG
i Macaca_arctoides.k141_2201161                         C 0 I 1241
s Macaca_assamensis.Contig65                             12703714 4 +  12821369 AAAG
i Macaca_assamensis.Contig65                            C 0 I 1252
s Macaca_cyclopis.k119_893486                                 611 4 -      3136 AAAG
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           44112 4 +     63263 AAAG
i Macaca_fascicularis.k141_155037                       C 0 I 1250
s Macaca_fuscata.k119_925451                                  128 4 +     10231 AAAG
i Macaca_fuscata.k119_925451                            C 0 I 21
s Macaca_leonina.k141_3421209                                2261 4 +      3017 AAAG
i Macaca_leonina.k141_3421209                           C 0 I 1
s Macaca_maura.k141_251854                                  43873 4 -     79256 AAAG
i Macaca_maura.k141_251854                              C 0 I 1
s Macaca_mulatta.NC_041755.1                            196032791 4 + 196197964 AAAG
i Macaca_mulatta.NC_041755.1                            C 0 I 1252
s Macaca_nemestrina.KQ004885.1                           11442897 4 +  11645122 AAAG
i Macaca_nemestrina.KQ004885.1                          C 0 I 1251
s Macaca_nigra.k141_282495                                   2820 4 -     46448 AAAG
i Macaca_nigra.k141_282495                              C 0 I 1
s Macaca_radiata.k141_1580474                                2651 4 -      3617 AAAG
i Macaca_radiata.k141_1580474                           C 0 I 1
s Macaca_siberu.k141_741907                                 12983 4 -     55006 AAAG
i Macaca_siberu.k141_741907                             C 0 I 1251
s Macaca_silenus.Contig12                                43838020 4 +  43892939 AAAG
i Macaca_silenus.Contig12                               C 0 I 1251
s Macaca_thibetana.k99_662710                               15521 4 -     24607 AAAG
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               2825 4 -     27140 AAAG
i Macaca_tonkeana.k141_2870633                          C 0 I 1
s Macroglossus_sobrinus.MacSob_scaffold_879                699936 4 +    802869 AAAG
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 I 1
s Mandrillus_leucophaeus.scaffold125                     43434682 4 -  43563597 AAAG
i Mandrillus_leucophaeus.scaffold125                    C 0 I 1238
s Mandrillus_sphinx.Contig144                             4447508 4 -   4543643 AAAG
i Mandrillus_sphinx.Contig144                           C 0 I 1238
s Manis_javanica.JSZB01003966.1                            144429 3 +    252755 A-AG
i Manis_javanica.JSZB01003966.1                         C 0 I 1
s Manis_pentadactyla.KN017078.1                             34501 3 +     58827 A-AG
i Manis_pentadactyla.KN017078.1                         C 0 I 1
s Marmota_marmota.CZRN01000005.1                         36871752 4 +  64221397 AAAG
i Marmota_marmota.CZRN01000005.1                        C 0 I 1
s Megaderma_lyra.MegLyr_scaffold_3562                       62591 4 -    234502 AAAG
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 I 1
s Mellivora_capensis.MelCap_flattened_line_146202             289 4 -      1999 AAAG
i Mellivora_capensis.MelCap_flattened_line_146202       C 0 I 1
s Meriones_unguiculatus.MerUng_scaffold_52233                9862 4 +     15977 ACAG
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 I 1
s Mesocricetus_auratus.KB708139.1                         1044645 4 -  26018355 AAAG
i Mesocricetus_auratus.KB708139.1                       C 0 I 1
s Mesoplodon_bidens.MesBid_scaffold_183284                   2028 3 +      2166 -TAA
i Mesoplodon_bidens.MesBid_scaffold_183284              C 0 I 1
s Microcebus_murinus.CM007691.1                          16508044 4 +  47401472 AAAG
i Microcebus_murinus.CM007691.1                         C 0 I 1
s Microgale_talazaci.MicTal_scaffold_34660                  29313 4 -     48017 AAAG
i Microgale_talazaci.MicTal_scaffold_34660              C 0 I 1
s Micronycteris_hirsuta.MicHir_scaffold_37978               21012 4 -     32043 AAAG
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 I 1
s Microtus_ochrogaster.CM001673.1                        22817763 4 -  98408828 AAAG
i Microtus_ochrogaster.CM001673.1                       C 0 I 1
s Miniopterus_natalensis.LDJU01000022.1                   8207772 4 +  10048721 AAAG
i Miniopterus_natalensis.LDJU01000022.1                 C 0 I 1
s Miniopterus_schreibersii.MinSch_scaffold_24116            32443 4 +     45743 AAAG
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 I 1
s Miopithecus_ogouensis.k141_2666161                        33341 4 +     34273 AAAG
i Miopithecus_ogouensis.k141_2666161                    C 0 I 1
s Mirounga_angustirostris.MirAng_flattened_line_8852         8995 4 -    104932 AAAG
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 I 1
s Mirza_zaza.k141_226143                                     3449 4 +      8497 AAAG
i Mirza_zaza.k141_226143                                C 0 I 1
s Monodon_monoceros.MonMon_M_scaffold_5598                 144753 3 +    154973 -TAA
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 I 1
s Mormoops_blainvillei.MorMeg_scaffold_2952                159522 4 +    265003 AAAG
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 I 1
s Moschus_moschiferus.MosMos_scaffold_146101                 2934 4 -      4346 AAAG
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 I 1
s Mungos_mungo.MunMun_flattened_line_8729                  142615 4 -    168139 AAAG
i Mungos_mungo.MunMun_flattened_line_8729               C 0 I 1
s Murina_feae.MurFea_scaffold_2254                          17416 4 -    100666 AAAG
i Murina_feae.MurFea_scaffold_2254                      C 0 I 1
s Mus_caroli.LT608236.1                                  70764276 4 +  92629107 AAAG
i Mus_caroli.LT608236.1                                 C 0 I 1
s Mus_musculus.chr16                                     75487313 4 +  98207768 AAAG
i Mus_musculus.chr16                                    C 0 I 1
s Mus_pahari.LT608305.1                                  67553484 4 +  89017189 AAAG
i Mus_pahari.LT608305.1                                 C 0 I 1
s Mus_spretus.CM004110.1                                 74328494 4 +  97876770 AAAG
i Mus_spretus.CM004110.1                                C 0 I 1
s Muscardinus_avellanarius.MusAve_scaffold_9643              9037 4 +     98495 AAAG
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 I 1
s Mustela_putorius.JH417978.1                             4421860 4 -  28371801 AAAG
i Mustela_putorius.JH417978.1                           C 0 I 1
s Myocastor_coypus.MyoCoy_scaffold_3653                     87989 4 -    117718 AAAG
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 I 1
s Myotis_brandtii.KE161952.1                               965736 4 +   8389877 AAAG
i Myotis_brandtii.KE161952.1                            C 0 I 1
s Myotis_davidii.KB114863.1                               5017427 4 +   6462685 AAAG
i Myotis_davidii.KB114863.1                             C 0 I 1
s Myotis_lucifugus.GL429887.1                             3463323 4 -   3747815 AAAG
i Myotis_lucifugus.GL429887.1                           C 0 I 1
s Myotis_myotis.MyoMyo_scaffold_6123                         8518 4 +     66751 AAAG
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 I 1
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3394 4 -      8794 AAAG
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 I 1
s Nannospalax_galili.KL201303.1                            108372 4 +    362372 AAAG
i Nannospalax_galili.KL201303.1                         C 0 I 1
s Nasalis_larvatus.k141_153429                               5720 4 +     48152 AAAG
i Nasalis_larvatus.k141_153429                          C 0 I 1254
s Neomonachus_schauinslandi.NINY01007774.1                4482594 4 -  14209539 AAAG
i Neomonachus_schauinslandi.NINY01007774.1              C 0 I 1
s Neophocaena_asiaeorientalis.KZ688543.1                  3949365 3 -   4490290 -taa
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 I 1
s Noctilio_leporinus.NocLep_scaffold_12062                  47639 3 +     94413 AAA-
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 I 1
s Nomascus_annamensis.k141_302224                             430 4 +      1516 AAAG
i Nomascus_annamensis.k141_302224                       I 56 C 0
s Nomascus_concolor.k141_49591                               1551 4 +      2014 AAAG
i Nomascus_concolor.k141_49591                          I 736 C 0
s Nomascus_gabriellae.k141_642452                             476 4 +      2851 AAAG
i Nomascus_gabriellae.k141_642452                       I 42 C 0
s Nomascus_siki_b.tarseq_80                             23391 4 -  18771707 AAAG
i Nomascus_siki_b.tarseq_80                         I 772 C 0
s Nomascus_siki_a.k141_595747                                  1104 4 +      4512 AAAG
i Nomascus_siki_a.k141_595747                             I 736 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                28044 4 +   3668941 AAAG
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 I 1
s Nycticebus_bengalensis.LG16                            65564885 4 -  95554990 AAAG
i Nycticebus_bengalensis.LG16                           C 0 I 1
s Nycticebus_coucang.k141_2051882                            1730 4 +      6470 AAAG
i Nycticebus_coucang.k141_2051882                       C 0 I 1
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65667255 4 +  89412551 AAAG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 I 1
s Ochotona_princeps.JH802095.1                            4993873 4 -  23139505 AAAG
i Ochotona_princeps.JH802095.1                          C 0 I 1
s Octodon_degus.JH651621.1                                3683461 4 +  10294119 aaaG
i Octodon_degus.JH651621.1                              C 0 I 1
s Odobenus_rosmarus.KB229369.1                             677250 4 -   3126709 AAAG
i Odobenus_rosmarus.KB229369.1                          C 0 I 1
s Odocoileus_virginianus.KZ101650.1                       1078062 4 +   1425656 AAAG
i Odocoileus_virginianus.KZ101650.1                     C 0 I 1
s Okapia_johnstoni.LVCL01S0017931.1                         35217 4 +     78940 AAAG
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 I 1
s Ondatra_zibethicus.OndZib_scaffold_6821                  123037 4 +    145789 AAAG
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 I 1
s Onychomys_torridus.OnyTor_scaffold_12578                  34793 4 +     62360 AAAG
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 I 1
s Orcinus_orca.KB316965.1                                 7223049 3 -   7562323 -taa
i Orcinus_orca.KB316965.1                               C 0 I 1
s Orycteropus_afer.OryAfe_flattened_line_13509              41433 4 -     66828 AAAG
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 I 1
s Oryctolagus_cuniculus.CM000803.1                      141873558 4 + 163896628 AAAG
i Oryctolagus_cuniculus.CM000803.1                      C 0 I 1
s Otocyon_megalotis.JAEUCK010005121.1                      305383 4 -    505867 AAAG
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 I 1
s Otolemur_crassicaudatus.k141_321880                       36876 4 +     38679 AAAG
i Otolemur_crassicaudatus.k141_321880                   C 0 I 1
s Otolemur_garnettii.GL873528.1                          18006318 4 -  38779656 AAAG
i Otolemur_garnettii.GL873528.1                         C 0 I 1
s Ovis_aries.CM001582.2                                 134075639 4 - 275406953 AAAG
i Ovis_aries.CM001582.2                                 C 0 I 1
s Ovis_canadensis.OviCan_scaffold_6251                      76853 4 +    140051 AAAG
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 I 1
s Pan_paniscus.CM003386.1                               127573113 4 - 205426864 aaag
i Pan_paniscus.CM003386.1                               I 742 C 0
s Pan_troglodytes.CM009241.2                            120150266 4 - 196562556 aaag
i Pan_troglodytes.CM009241.2                            I 742 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  32078 4 +    295523 AAAG
i Panthera_onca.PanOnc_flattened_line_1615              C 0 I 1
s Panthera_pardus.KV860323.1                              3635811 4 +  18214204 AAAG
i Panthera_pardus.KV860323.1                            C 0 I 1
s Panthera_tigris.KE721879.1                              5025459 4 -   6340057 AAAG
i Panthera_tigris.KE721879.1                            C 0 I 1
s Pantholops_hodgsonii.KE114631.1                         1064500 4 -   1292953 AAAG
i Pantholops_hodgsonii.KE114631.1                       C 0 I 1
s Papio_anubis.CM001492.2                               188153466 4 - 188283584 AAAG
i Papio_anubis.CM001492.2                               C 0 I 1243
s Papio_cynocephalus.k141_883042                             3027 4 +      5367 AAAG
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47510863 4 +  47705337 AAAG
i Papio_hamadryas.Contig15                              C 0 I 1235
s Papio_kindae.k141_5458022                                 64840 4 -    104429 AAAG
i Papio_kindae.k141_5458022                             C 0 I 1236
s Papio_papio.k141_979496                                    4608 4 +     14967 AAAG
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_3762866                                35034 4 +     35859 AAAG
i Papio_ursinus.k141_3762866                            C 0 I 1
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113378 4 -    135482 AAAG
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 I 1
s Perodicticus_ibeanus.k141_117958                           2929 4 -     23713 AAAG
i Perodicticus_ibeanus.k141_117958                      C 0 I 1
s Perodicticus_potto.k141_713187                            22228 4 -     27972 AAAG
i Perodicticus_potto.k141_713187                        C 0 I 1
s Perognathus_longimembris.PerPac_flattened_line_22291      40845 4 -     45160 AATG
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 I 1
s Peromyscus_maniculatus.KI615518.1                       4947969 4 -   8017169 AAAG
i Peromyscus_maniculatus.KI615518.1                     C 0 I 1
s Petromus_typicus.PetTyp_scaffold_33007                    10150 4 -     36578 AAAG
i Petromus_typicus.PetTyp_scaffold_33007                C 0 I 1
s Phocoena_phocoena.PhoPho_flattened_line_11948            119666 3 -    122454 -TAA
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 I 1
s Piliocolobus_badius.k141_1497351                           2724 4 -      3310 AAAG
i Piliocolobus_badius.k141_1497351                      C 0 I 1
s Piliocolobus_gordonorum.k141_902470                       22629 4 -     82327 AAAG
i Piliocolobus_gordonorum.k141_902470                   C 0 I 1
s Piliocolobus_kirkii.k141_929665                             483 4 +      7694 AAAG
i Piliocolobus_kirkii.k141_929665                       I 7 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26737390 4 +  26888534 AAAG
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 I 1571
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            95187 4 +    112873 AAAG
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 I 1
s Pithecia_albicans.k141_991845                             41372 4 -     61926 AAAG
i Pithecia_albicans.k141_991845                         C 0 I 1
s Pithecia_chrysocephala.k141_159118                        22801 4 +     78826 AAAG
i Pithecia_chrysocephala.k141_159118                    C 0 I 1
s Pithecia_hirsuta.k141_1152968                              6752 4 -     15800 AAAG
i Pithecia_hirsuta.k141_1152968                         C 0 I 1
s Pithecia_mittermeieri.k141_2119203                         9950 4 -     16101 AAAG
i Pithecia_mittermeieri.k141_2119203                    C 0 I 1
s Pithecia_pissinattii.k141_1102319                          3259 4 +      9673 AAAG
i Pithecia_pissinattii.k141_1102319                     C 0 I 1
s Pithecia_pithecia.tarseq_313                           13472253 4 -  19735023 AAAG
i Pithecia_pithecia.tarseq_313                          C 0 I 1
s Pithecia_vanzolinii.k141_831006                           11161 4 -     31692 AAAG
i Pithecia_vanzolinii.k141_831006                       C 0 I 1
s Platanista_gangetica.PlaMin_flattened_line_72990           3734 3 +     21690 -TAA
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 I 1
s Plecturocebus_bernhardi.k141_959214                       20593 4 +     44506 AAAG
i Plecturocebus_bernhardi.k141_959214                   C 0 I 1
s Plecturocebus_brunneus.k141_498086                        20803 4 +     67491 AAAG
i Plecturocebus_brunneus.k141_498086                    C 0 I 1
s Plecturocebus_caligatus.k141_2539816                      11044 4 -     98129 AAAG
i Plecturocebus_caligatus.k141_2539816                  C 0 I 1
s Plecturocebus_cinerascens.k141_744510                     20649 4 +    147771 AAAG
i Plecturocebus_cinerascens.k141_744510                 C 0 I 1
s Plecturocebus_cupreus.k141_1223294                        20899 4 -     23762 AAAG
i Plecturocebus_cupreus.k141_1223294                    C 0 I 1
s Plecturocebus_dubius.k141_3565563                          1365 4 -     55515 AAAG
i Plecturocebus_dubius.k141_3565563                     C 0 I 1
s Plecturocebus_grovesi.k141_242819                         20718 4 +    152463 AAAG
i Plecturocebus_grovesi.k141_242819                     C 0 I 1
s Plecturocebus_hoffmannsi.k141_1595076                      7478 4 +      8943 AAAG
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 I 1
s Plecturocebus_miltoni.k141_841561                         10438 4 +    134592 AAAG
i Plecturocebus_miltoni.k141_841561                     C 0 I 1
s Plecturocebus_moloch.k141_890597                          21028 4 -     75465 AAAG
i Plecturocebus_moloch.k141_890597                      C 0 I 1
s Pongo_abelii.NDHI03003816.1                              185655 4 -    373494 AAAG
i Pongo_abelii.NDHI03003816.1                           I 739 C 0
s Pongo_pygmaeus.ctg62                                   19806303 4 +  19899266 AAAG
i Pongo_pygmaeus.ctg62                                  I 1480 C 0
s Presbytis_comata.k141_672698                               2958 4 -     15069 AAAG
i Presbytis_comata.k141_672698                          C 0 I 1260
s Presbytis_mitrata.k141_860013                              3092 4 +     14865 AAAG
i Presbytis_mitrata.k141_860013                         C 0 I 1260
s Procavia_capensis.ProCapCap_scaffold_15315                74264 4 +     78963 AAAG
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 I 1
s Prolemur_simus.MPIZ01000048.1                           6846300 4 +  12164890 AAAG
i Prolemur_simus.MPIZ01000048.1                         C 0 I 1
s Propithecus_coquerelli.NW_012147997.1                    664917 4 -   2312742 NNNN
i Propithecus_coquerelli.NW_012147997.1                 C 0 I 1
s Propithecus_coronatus.k141_1353159                         1444 4 +     11805 AAAG
i Propithecus_coronatus.k141_1353159                    C 0 I 1
s Propithecus_diadema.k141_577245                           40778 4 +     52369 AAAG
i Propithecus_diadema.k141_577245                       C 0 I 1
s Propithecus_edwardsi.k141_1317105                         33167 4 -     44753 AAAG
i Propithecus_edwardsi.k141_1317105                     C 0 I 1
s Propithecus_perrieri.k141_7554                            15088 4 +     27322 AAAG
i Propithecus_perrieri.k141_7554                        C 0 I 1
s Propithecus_tattersalli.k141_907138                       14727 4 -     53241 AAAG
i Propithecus_tattersalli.k141_907138                   C 0 I 1
s Propithecus_verreauxi.k141_158021                         36999 4 -     48185 AAAG
i Propithecus_verreauxi.k141_158021                     C 0 I 1
s Psammomys_obesus.NESX01026517.1                           31401 4 +     77221 AAAG
i Psammomys_obesus.NESX01026517.1                       C 0 I 1
s Pteronotus_parnellii.KE867983.1                            2193 4 -     27784 AAAG
i Pteronotus_parnellii.KE867983.1                       C 0 I 1
s Pteronura_brasiliensis.PteBra_flattened_line_1343        243953 4 -    344369 AAAG
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 I 1
s Pteropus_alecto.KB031157.1                             13244316 4 -  17261082 AAAG
i Pteropus_alecto.KB031157.1                            C 0 I 1
s Pteropus_vampyrus.KN525959.1                             602267 4 -   3946241 AAAG
i Pteropus_vampyrus.KN525959.1                          C 0 I 1
s Puma_concolor.QAVW01000427.1                          131532041 4 - 161321710 AAAG
i Puma_concolor.QAVW01000427.1                          C 0 I 1
s Pygathrix_cinerea.k141_374971                             27087 4 +     56732 AAAG
i Pygathrix_cinerea.k141_374971                         C 0 I 1254
s Pygathrix_nigripes_b.ctg79                                 6803578 4 +   6970761 AAAG
i Pygathrix_nigripes_b.ctg79                               C 0 I 1254
s Pygathrix_nigripes_a.k141_101123                             2971 4 +     18040 AAAG
i Pygathrix_nigripes_a.k141_101123                        C 0 I 1255
s Rangifer_tarandus.RanTarSib_scaffold_24239                14140 4 +     68503 AAAG
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 I 1
s Rattus_norvegicus.chr11                                13913377 4 +  90463843 AAAG
i Rattus_norvegicus.chr11                               C 0 I 1
s Rhinolophus_sinicus.LVEH01000179.1                      1786137 4 +   2252614 AAAG
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 I 1
s Rhinopithecus_bieti.k119_102124                           13524 4 -     14454 AAAG
i Rhinopithecus_bieti.k119_102124                       C 0 I 1
s Rhinopithecus_roxellana.NC_044549.1                   206374850 4 - 206558726 AAAG
i Rhinopithecus_roxellana.NC_044549.1                   C 0 I 1256
s Rhinopithecus_strykeri.ctg4                            44853750 4 -  45163003 AAAG
i Rhinopithecus_strykeri.ctg4                           C 0 I 1256
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                17609 4 +    109198 AAAG
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 I 1
s Saiga_tatarica.SaiTat_scaffold_82192                       5945 4 +     12214 AAAG
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 I 1
s Saimiri_boliviensis.NW_024100938.1                     15670488 4 -  43202129 AAAG
i Saimiri_boliviensis.NW_024100938.1                    C 0 I 1
s Saimiri_cassiquiarensis.k141_808270                        2354 4 +     34089 AAAG
i Saimiri_cassiquiarensis.k141_808270                   C 0 I 1
s Saimiri_macrodon.k141_2087127                              2295 4 -     60842 AAAG
i Saimiri_macrodon.k141_2087127                         C 0 I 1
s Saimiri_oerstedii.k141_841116                              2390 4 +     67014 AAAG
i Saimiri_oerstedii.k141_841116                         C 0 I 1
s Saimiri_sciureus.k141_1947592                              2368 4 +     60816 AAAG
i Saimiri_sciureus.k141_1947592                         C 0 I 1
s Saimiri_ustus.k141_1282476                                 2305 4 -     76454 AAAG
i Saimiri_ustus.k141_1282476                            C 0 I 1
s Sapajus_apella.ctg10                                   17339763 4 -  30362882 AAAG
i Sapajus_apella.ctg10                                  I 724 T 723
s Sapajus_macrocephalus.k141_966464                         19138 4 -     62485 AAAG
i Sapajus_macrocephalus.k141_966464                     I 724 T 723
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   29699 4 -    114521 AAAG
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 I 1
s Semnopithecus_entellus.k141_1527475                       25512 4 +     26421 AAAG
i Semnopithecus_entellus.k141_1527475                   C 0 I 1
s Semnopithecus_hypoleucos.k141_761524                       5972 4 +     20762 AAAG
i Semnopithecus_hypoleucos.k141_761524                  C 0 I 1258
s Semnopithecus_johnii.k141_1351450                         39707 4 +     40653 AAAG
i Semnopithecus_johnii.k141_1351450                     C 0 I 1
s Semnopithecus_priam.k141_410937                           36019 4 +     46263 AAAG
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     29134 4 +     42640 AAAG
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_642050                         32705 4 -     33692 AAAG
i Semnopithecus_vetulus.k141_642050                     C 0 I 1
s Sigmodon_hispidus.SigHis_scaffold_11332                   97590 4 -    120886 AAAG
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 I 1
s Solenodon_paradoxus.SolPar_flattened_line_1012            16338 4 +    739146 AAAG
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 I 1
s Sorex_araneus.JH798170.1                               17748549 4 -  27805282 CAAG
i Sorex_araneus.JH798170.1                              C 0 I 1
s Spermophilus_dauricus.KZ294190.1                        2237828 4 +   2842873 AAAG
i Spermophilus_dauricus.KZ294190.1                      C 0 I 1
s Spilogale_gracilis.SpiGra_flattened_line_905             232713 4 -    276980 AAAG
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 I 1
s Suricata_suricatta.SurSur_flattened_line_20339            25281 4 +     62062 AAAG
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 I 1
s Sus_scrofa.CM000824.4                                 189270190 4 + 218635234 AAAG
i Sus_scrofa.CM000824.4                                 C 0 I 1
s Symphalangus_syndactylus.tarseq_24                        13383 4 -  13920577 AAAG
i Symphalangus_syndactylus.tarseq_24                    I 56 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               4136 4 -      6213 AAAG
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 I 1
s Tamandua_tetradactyla.TamTet_scaffold_26877               13068 4 +     45698 AAAG
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 I 1
s Tapirus_indicus.TapInd_scaffold_176                      805057 4 +   1148477 AAAG
i Tapirus_indicus.TapInd_scaffold_176                   C 0 I 1
s Tapirus_terrestris.TapTer_scaffold_14939                  55718 4 +     99546 AAAG
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 I 1
s Tarsius_lariang.k141_609102                               24372 4 +     42269 AAGG
i Tarsius_lariang.k141_609102                           C 0 I 1
s Tarsius_wallacei.k141_48636                               57688 4 +     65473 AAGG
i Tarsius_wallacei.k141_48636                           C 0 I 1
s Theropithecus_gelada.CM009951.1                       194005002 4 - 194193292 AAAG
i Theropithecus_gelada.CM009951.1                       C 0 I 1235
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             37207 4 -     47444 AAAG
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 I 1
s Tolypeutes_matacus.TolMat_scaffold_269431                  1952 4 +      6782 AAAG
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 I 1
s Tonatia_saurophila.TonSau_scaffold_3334                  134203 4 -    259118 AAAG
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 I 1
s Trachypithecus_auratus.k141_738098                        24082 4 +     38948 AAAG
i Trachypithecus_auratus.k141_738098                    C 0 I 1258
s Trachypithecus_crepusculus.k141_1588528                   17809 4 -     32910 AAAG
i Trachypithecus_crepusculus.k141_1588528               C 0 I 1258
s Trachypithecus_cristatus.k141_27198                       23707 4 +     24652 AAAG
i Trachypithecus_cristatus.k141_27198                   C 0 I 1
s Trachypithecus_francoisi.k141_1178450                      2585 4 -      3559 AAAG
i Trachypithecus_francoisi.k141_1178450                 C 0 I 1
s Trachypithecus_geei.k141_670367                           40531 4 -     54611 AAAG
i Trachypithecus_geei.k141_670367                       C 0 I 1256
s Trachypithecus_germaini.k141_878600                         617 4 +      1165 AAAG
i Trachypithecus_germaini.k141_878600                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     1765 4 -     15592 AAAG
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                           422 4 +     14371 AAAG
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  48921 4 +     51589 AAAG
i Trachypithecus_leucocephalus.k141_283605              C 0 I 1258
s Trachypithecus_melamera.k141_238507                       12097 4 +     14732 AAAG
i Trachypithecus_melamera.k141_238507                   C 0 I 1258
s Trachypithecus_obscurus.k141_1115109                       2574 4 -     28054 AAAG
i Trachypithecus_obscurus.k141_1115109                  C 0 I 1258
s Trachypithecus_phayrei.ctg3                            44657369 4 -  44834318 AAAG
i Trachypithecus_phayrei.ctg3                           C 0 I 1258
s Trachypithecus_pileatus.k141_469329                        2379 4 +      3372 AAAG
i Trachypithecus_pileatus.k141_469329                   C 0 I 1
s Tragulus_javanicus.TraJav_scaffold_14717                   3546 4 +     90398 AAAA
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 I 1
s Trichechus_manatus.JH594618.1                          16079641 4 +  31416278 AAAG
i Trichechus_manatus.JH594618.1                         C 0 I 1
s Tupaia_chinensis.KB320831.1                             2790045 4 -   3938065 aaaa
i Tupaia_chinensis.KB320831.1                           C 0 I 1
s Tupaia_tana.TupTan_flattened_line_68454                    2565 4 +     13056 AAAG
i Tupaia_tana.TupTan_flattened_line_68454               C 0 I 1
s Tursiops_truncatus.MRVK01000923.1                      69311768 3 -  96451834 -taa
i Tursiops_truncatus.MRVK01000923.1                     C 0 I 1
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 24887 4 -     25548 AAAG
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 I 1
s Ursus_maritimus.KK498671.1                              6512505 4 +  28682327 AAAG
i Ursus_maritimus.KK498671.1                            C 0 I 1
s Varecia_rubra.k141_432109                                  3141 4 -     20643 AAAG
i Varecia_rubra.k141_432109                             C 0 I 1
s Varecia_variegata.k141_775891                             22685 4 -     33872 AAAG
i Varecia_variegata.k141_775891                         C 0 I 1
s Vicugna_pacos.KN269600.1                                1522999 4 -   2331223 AAAG
i Vicugna_pacos.KN269600.1                              C 0 I 1
s Vulpes_lagopus.VulLag_flattened_line_2045                135451 4 -    281493 AAAG
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 I 1
s Xerus_inauris.XerIna_scaffold_7898                       124926 4 -    134049 AAAG
i Xerus_inauris.XerIna_scaffold_7898                    C 0 I 1
s Zalophus_californianus.ZalCal_flattened_line_4097        211980 4 -    227762 AAAG
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 I 1
s Zapus_hudsonius.ZapHud_scaffold_64392                     13163 4 -     20485 ACAG
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 I 1
s Ziphius_cavirostris.ZipCav_flattened_line_127025           5264 3 -      8775 -TAA
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 I 1
e Echinops_telfairi.JH980316.1                           22994071 0 -  44670279 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               10374 1 +    209709 c
s Allenopithecus_nigroviridis.k141_3103728                    976 1 +      1665 C
i Allenopithecus_nigroviridis.k141_3103728              C 0 I 28
s Allochrocebus_lhoesti.k141_3566948                          462 1 -     29318 C
i Allochrocebus_lhoesti.k141_3566948                    I 11 I 28
s Allochrocebus_preussi.k141_21674                            679 1 -      1421 C
i Allochrocebus_preussi.k141_21674                      I 11 I 28
s Allochrocebus_solatus.k141_371672                           356 1 -     80423 C
i Allochrocebus_solatus.k141_371672                     I 11 I 28
s Cercocebus_atys.KQ010443.1                              6553675 1 +   6739814 G
i Cercocebus_atys.KQ010443.1                            I 1237 T 1237
s Cercocebus_chrysogaster.k141_2328246                      25152 1 +     60454 G
i Cercocebus_chrysogaster.k141_2328246                  C 0 I 28
s Cercocebus_lunulatus.k141_4634644                           357 1 -     21101 G
i Cercocebus_lunulatus.k141_4634644                     C 0 I 28
s Cercocebus_torquatus.k141_3969582                         57667 1 -    107033 C
i Cercocebus_torquatus.k141_3969582                     I 1237 T 1237
s Cercopithecus_ascanius.k141_4123525                         561 1 -     17608 C
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          28059 1 +     30494 C
i Cercopithecus_cephus.k141_598190                      I 1251 T 1251
s Cercopithecus_diana.k141_2980617                          56902 1 -     59240 C
i Cercopithecus_diana.k141_2980617                      I 11 I 28
s Cercopithecus_hamlyni.k141_129805                           603 1 +     16677 C
i Cercopithecus_hamlyni.k141_129805                     I 11 I 28
s Cercopithecus_lowei.k141_623764                           22761 1 +     35983 C
i Cercopithecus_lowei.k141_623764                       I 1247 T 1247
s Cercopithecus_albogularis.ctg51                              11989292 1 +  12117833 C
i Cercopithecus_albogularis.ctg51                             I 1241 T 1241
s Cercopithecus_mona.ctg12                               46476047 1 +  46592721 C
i Cercopithecus_mona.ctg12                              I 1243 T 1243
s Cercopithecus_neglectus.k141_2078027                      39598 1 -     45581 C
i Cercopithecus_neglectus.k141_2078027                  C 0 I 28
s Cercopithecus_nictitans.k141_1129315                        607 1 +     35577 C
i Cercopithecus_nictitans.k141_1129315                  C 0 I 28
s Cercopithecus_petaurista.k141_64532                         380 1 -     25661 C
i Cercopithecus_petaurista.k141_64532                   C 0 I 28
s Cercopithecus_pogonias.k141_3109732                         358 1 -     17744 C
i Cercopithecus_pogonias.k141_3109732                   I 11 I 28
s Cercopithecus_roloway.k141_2263608                        19967 1 +     37128 C
i Cercopithecus_roloway.k141_2263608                    C 0 I 28
s Chlorocebus_aethiops.ctg22                             15137522 1 -  15256731 C
i Chlorocebus_aethiops.ctg22                            I 1257 T 1257
s Chlorocebus_pygerythrus.k141_1486215                      32569 1 -     53260 C
i Chlorocebus_pygerythrus.k141_1486215                  I 1258 T 1258
s Chlorocebus_sabaeus.CM001963.2                        101143132 1 + 101219884 C
i Chlorocebus_sabaeus.CM001963.2                        I 1372 T 1372
s Colobus_angolensis.KN985967.1                          10884895 1 +  10971483 C
i Colobus_angolensis.KN985967.1                         I 4556 T 4556
s Colobus_guereza.LG08                                  147663059 1 + 156195979 C
i Colobus_guereza.LG08                                  I 1562 T 1562
s Colobus_polykomos.k141_1406057                            15043 1 +     23629 C
i Colobus_polykomos.k141_1406057                        I 1559 T 1559
s Erythrocebus_patas.Contig8                             48769702 1 -  48907691 C
i Erythrocebus_patas.Contig8                            I 1259 T 1259
s Gorilla_beringei.k141_111300                               3774 1 -     14630 C
i Gorilla_beringei.k141_111300                          C 0 T 743
s Gorilla_gorilla.LT578340.1                            119650873 1 - 195582420 c
i Gorilla_gorilla.LT578340.1                            C 0 T 743
s Hoolock_leuconedys.ctg2405                                   13805 1 -     15084 C
i Hoolock_leuconedys.ctg2405                               C 0 I 130
s Lophocebus_aterrimus.ctg55                             19246764 1 +  19376315 C
i Lophocebus_aterrimus.ctg55                            I 1238 C 0
s Macaca_arctoides.k141_2201161                             18453 1 +     74745 C
i Macaca_arctoides.k141_2201161                         I 1241 T 1241
s Macaca_assamensis.Contig65                             12704970 1 +  12821369 C
i Macaca_assamensis.Contig65                            I 1252 T 1252
s Macaca_cyclopis.k119_893486                                 615 1 -      3136 C
i Macaca_cyclopis.k119_893486                           C 0 I 28
s Macaca_fascicularis.k141_155037                           45366 1 +     63263 C
i Macaca_fascicularis.k141_155037                       I 1250 T 1250
s Macaca_fuscata.k119_599327                                  132 1 -      2568 C
i Macaca_fuscata.k119_599327                            I 11 C 0
s Macaca_leonina.k141_467472                                  640 1 -      7381 T
i Macaca_leonina.k141_467472                            I 11 I 28
s Macaca_mulatta.NC_041755.1                            196034047 1 + 196197964 C
i Macaca_mulatta.NC_041755.1                            I 1252 T 1252
s Macaca_nemestrina.KQ004885.1                           11444152 1 +  11645122 C
i Macaca_nemestrina.KQ004885.1                          I 1251 T 1251
s Macaca_radiata.k141_3680256                                 496 1 -     13212 C
i Macaca_radiata.k141_3680256                           I 11 I 28
s Macaca_siberu.k141_741907                                 14238 1 -     55006 C
i Macaca_siberu.k141_741907                             I 1251 T 1251
s Macaca_silenus.Contig12                                43839275 1 +  43892939 T
i Macaca_silenus.Contig12                               I 1251 T 1251
s Macaca_thibetana.k99_662710                               15525 1 -     24607 C
i Macaca_thibetana.k99_662710                           C 0 I 28
s Mandrillus_leucophaeus.scaffold125                     43435924 1 -  43563597 C
i Mandrillus_leucophaeus.scaffold125                    I 1238 T 1238
s Mandrillus_sphinx.Contig144                             4448750 1 -   4543643 C
i Mandrillus_sphinx.Contig144                           I 1238 T 1238
s Miopithecus_ogouensis.k141_2935907                          469 1 +     29742 C
i Miopithecus_ogouensis.k141_2935907                    I 11 I 28
s Nasalis_larvatus.k141_153429                               6978 1 +     48152 C
i Nasalis_larvatus.k141_153429                          I 1254 T 1254
s Nomascus_annamensis.k141_302224                             434 1 +      1516 C
i Nomascus_annamensis.k141_302224                       C 0 C 0
s Nomascus_concolor.k141_49591                               1555 1 +      2014 C
i Nomascus_concolor.k141_49591                          C 0 T 736
s Nomascus_gabriellae.k141_642452                             480 1 +      2851 C
i Nomascus_gabriellae.k141_642452                       C 0 I 28
s Nomascus_siki_b.tarseq_80                             23395 1 -  18771707 C
i Nomascus_siki_b.tarseq_80                         C 0 T 772
s Nomascus_siki_a.k141_595747                                  1108 1 +      4512 C
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Pan_paniscus.CM003386.1                               127573117 1 - 205426864 c
i Pan_paniscus.CM003386.1                               C 0 T 742
s Pan_troglodytes.CM009241.2                            120150270 1 - 196562556 c
i Pan_troglodytes.CM009241.2                            C 0 I 28
s Papio_anubis.CM001492.2                               188154713 1 - 188283584 C
i Papio_anubis.CM001492.2                               I 1243 T 1243
s Papio_cynocephalus.k141_883042                             3031 1 +      5367 C
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47512102 1 +  47705337 C
i Papio_hamadryas.Contig15                              I 1235 T 1235
s Papio_kindae.k141_5458022                                 66080 1 -    104429 C
i Papio_kindae.k141_5458022                             I 1236 T 1236
s Papio_papio.k141_979496                                    4612 1 +     14967 C
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                  473 1 -      7628 C
i Papio_ursinus.k141_1345919                            I 11 I 28
s Piliocolobus_badius.k141_1987485                            501 1 -      5908 C
i Piliocolobus_badius.k141_1987485                      n 1 I 28
s Piliocolobus_gordonorum.k141_1270531                       1120 1 -     17985 C
i Piliocolobus_gordonorum.k141_1270531                  I 46 I 28
s Piliocolobus_kirkii.k141_929665                             487 1 +      7694 C
i Piliocolobus_kirkii.k141_929665                       C 0 I 28
s Piliocolobus_tephrosceles.PDMG02000036.1               26738965 1 +  26888534 C
i Piliocolobus_tephrosceles.PDMG02000036.1              I 1571 T 1571
s Pongo_abelii.NDHI03003816.1                              185659 1 -    373494 C
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19806307 1 +  19899266 C
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               4222 1 -     15069 C
i Presbytis_comata.k141_672698                          I 1260 T 1260
s Presbytis_mitrata.k141_860013                              4356 1 +     14865 C
i Presbytis_mitrata.k141_860013                         I 1260 T 1260
s Pygathrix_cinerea.k141_374971                             28345 1 +     56732 C
i Pygathrix_cinerea.k141_374971                         I 1254 T 1254
s Pygathrix_nigripes_b.ctg79                                 6804836 1 +   6970761 C
i Pygathrix_nigripes_b.ctg79                               I 1254 T 1254
s Pygathrix_nigripes_a.k141_101123                             4230 1 +     18040 C
i Pygathrix_nigripes_a.k141_101123                        I 1255 T 1255
s Rhinopithecus_bieti.k119_1391695                            453 1 -      1866 C
i Rhinopithecus_bieti.k119_1391695                      I 11 I 28
s Rhinopithecus_roxellana.NC_044549.1                   206376110 1 - 206558726 C
i Rhinopithecus_roxellana.NC_044549.1                   I 1256 T 1256
s Rhinopithecus_strykeri.ctg4                            44855010 1 -  45163003 C
i Rhinopithecus_strykeri.ctg4                           I 1256 T 2508
s Semnopithecus_entellus.k141_1572367                        1838 1 +     15331 C
i Semnopithecus_entellus.k141_1572367                   I 11 I 28
s Semnopithecus_hypoleucos.k141_761524                       7234 1 +     20762 C
i Semnopithecus_hypoleucos.k141_761524                  I 1258 T 1258
s Semnopithecus_johnii.k141_785014                         117232 1 +    130994 C
i Semnopithecus_johnii.k141_785014                      I 11 I 28
s Semnopithecus_priam.k141_410937                           36023 1 +     46263 C
i Semnopithecus_priam.k141_410937                       C 0 I 28
s Semnopithecus_schistaceus.k141_387461                     29138 1 +     42640 C
i Semnopithecus_schistaceus.k141_387461                 C 0 I 28
s Semnopithecus_vetulus.k141_1143185                        12186 1 +     30600 C
i Semnopithecus_vetulus.k141_1143185                    I 11 I 28
s Symphalangus_syndactylus.tarseq_24                        13387 1 -  13920577 C
i Symphalangus_syndactylus.tarseq_24                    C 0 I 28
s Theropithecus_gelada.CM009951.1                       194006241 1 - 194193292 C
i Theropithecus_gelada.CM009951.1                       I 1235 T 1235
s Trachypithecus_auratus.k141_738098                        25344 1 +     38948 C
i Trachypithecus_auratus.k141_738098                    I 1258 T 1258
s Trachypithecus_crepusculus.k141_1588528                   19071 1 -     32910 C
i Trachypithecus_crepusculus.k141_1588528               I 1258 T 1258
s Trachypithecus_cristatus.k141_1011511                       458 1 -     12939 C
i Trachypithecus_cristatus.k141_1011511                 I 11 I 28
s Trachypithecus_francoisi.k141_768164                        398 1 -     14244 C
i Trachypithecus_francoisi.k141_768164                  I 11 I 28
s Trachypithecus_geei.k141_670367                           41791 1 -     54611 C
i Trachypithecus_geei.k141_670367                       I 1256 T 1256
s Trachypithecus_germaini.k141_878600                         621 1 +      1165 C
i Trachypithecus_germaini.k141_878600                   C 0 I 28
s Trachypithecus_hatinhensis.k141_504423                     1769 1 -     15592 C
i Trachypithecus_hatinhensis.k141_504423                C 0 I 28
s Trachypithecus_laotum.k141_760702                           426 1 +     14371 C
i Trachypithecus_laotum.k141_760702                     C 0 I 28
s Trachypithecus_leucocephalus.k141_283605                  50183 1 +     51589 C
i Trachypithecus_leucocephalus.k141_283605              I 1258 T 1258
s Trachypithecus_melamera.k141_238507                       13359 1 +     14732 C
i Trachypithecus_melamera.k141_238507                   I 1258 T 1258
s Trachypithecus_obscurus.k141_1115109                       3836 1 -     28054 C
i Trachypithecus_obscurus.k141_1115109                  I 1258 T 1258
s Trachypithecus_phayrei.ctg3                            44658631 1 -  44834318 C
i Trachypithecus_phayrei.ctg3                           I 1258 T 1258
s Trachypithecus_pileatus.k141_1022309                        934 1 +     13828 C
i Trachypithecus_pileatus.k141_1022309                  I 11 I 28
e Eptesicus_fuscus.JH977687.1                             4702110 1 +   6522550 I
e Macroglossus_sobrinus.MacSob_scaffold_879                699940 1 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             37211 1 -     47444 I
e Petromus_typicus.PetTyp_scaffold_33007                    10154 1 -     36578 I
e Sorex_araneus.JH798170.1                               17748553 1 -  27805282 I
e Dinomys_branickii.DinBra_scaffold_1996                   155547 1 +    228994 I
e Erinaceus_europaeus.JH835290.1                         11530799 1 +  16010500 I
e Chaetophractus_vellerosus.ChaVel_scaffold_1070855          1196 1 -      1715 I
e Aplodontia_rufa.AprRuf_scaffold_156013                     1793 1 +      5067 I
e Oryctolagus_cuniculus.CM000803.1                      141873562 1 + 163896628 I
e Ochotona_princeps.JH802095.1                            4993877 1 -  23139505 I
e Lepus_americanus.LepAme_scaffold_62849                    10904 1 +     22452 I
e Perognathus_longimembris.PerPac_flattened_line_22291      40849 1 -     45160 I
e Dipodomys_stephensi.DipSte_scaffold_44365                 24852 0 +     28912 C
e Dipodomys_ordii.KN672545.1                              3653296 1 +   4240102 I
e Suricata_suricatta.SurSur_flattened_line_20339            25285 1 +     62062 I
e Chrysochloris_asiatica.ChrAsi_scaffold_141308              6907 1 -     12508 I
e Ziphius_cavirostris.ZipCav_flattened_line_127025           5267 1 -      8775 I
e Zalophus_californianus.ZalCal_flattened_line_4097        211984 1 -    227762 I
e Vulpes_lagopus.VulLag_flattened_line_2045                135455 1 -    281493 I
e Vicugna_pacos.KN269600.1                                1523003 1 -   2331223 I
e Ursus_maritimus.KK498671.1                              6512509 1 +  28682327 I
e Uropsilus_gracilis.UroGra_scaffold_4143_0                 24891 1 -     25548 I
e Tursiops_truncatus.MRVK01000923.1                      69311771 1 -  96451834 I
e Trichechus_manatus.JH594618.1                          16079645 1 +  31416278 I
e Tragulus_javanicus.TraJav_scaffold_14717                   3550 1 +     90398 I
e Tonatia_saurophila.TonSau_scaffold_3334                  134207 1 -    259118 I
e Tolypeutes_matacus.TolMat_scaffold_269431                  1956 1 +      6782 I
e Tapirus_terrestris.TapTer_scaffold_14939                  55722 1 +     99546 I
e Tapirus_indicus.TapInd_scaffold_176                      805061 1 +   1148477 I
e Tamandua_tetradactyla.TamTet_scaffold_26877               13072 1 +     45698 I
e Tadarida_brasiliensis.TadBra_scaffold_145589               4140 1 -      6213 I
e Sus_scrofa.CM000824.4                                 189270194 1 + 218635234 I
e Spilogale_gracilis.SpiGra_flattened_line_905             232717 1 -    276980 I
e Solenodon_paradoxus.SolPar_flattened_line_1012            16342 1 +    739146 I
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   29703 1 -    114521 I
e Saiga_tatarica.SaiTat_scaffold_82192                       5949 1 +     12214 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                17613 1 +    109198 I
e Rhinolophus_sinicus.LVEH01000179.1                      1786141 1 +   2252614 I
e Rangifer_tarandus.RanTarSib_scaffold_24239                14144 1 +     68503 I
e Puma_concolor.QAVW01000427.1                          131532045 1 - 161321710 I
e Pteropus_vampyrus.KN525959.1                             602271 1 -   3946241 I
e Pteropus_alecto.KB031157.1                             13244320 1 -  17261082 I
e Pteronura_brasiliensis.PteBra_flattened_line_1343        243957 1 -    344369 I
e Pteronotus_parnellii.KE867983.1                            2197 1 -     27784 I
e Procavia_capensis.ProCapCap_scaffold_15315                74268 1 +     78963 I
e Platanista_gangetica.PlaMin_flattened_line_72990           3737 1 +     21690 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            95191 1 +    112873 I
e Phocoena_phocoena.PhoPho_flattened_line_11948            119669 1 -    122454 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113382 1 -    135482 I
e Pantholops_hodgsonii.KE114631.1                         1064504 1 -   1292953 I
e Panthera_tigris.KE721879.1                              5025463 1 -   6340057 I
e Panthera_pardus.KV860323.1                              3635815 1 +  18214204 I
e Panthera_onca.PanOnc_flattened_line_1615                  32082 1 +    295523 I
e Ovis_canadensis.OviCan_scaffold_6251                      76857 1 +    140051 I
e Ovis_aries.CM001582.2                                 134075643 1 - 275406953 I
e Otocyon_megalotis.JAEUCK010005121.1                      305387 1 -    505867 I
e Orycteropus_afer.OryAfe_flattened_line_13509              41437 1 -     66828 I
e Orcinus_orca.KB316965.1                                 7223052 1 -   7562323 I
e Okapia_johnstoni.LVCL01S0017931.1                         35221 1 +     78940 I
e Odocoileus_virginianus.KZ101650.1                       1078066 1 +   1425656 I
e Odobenus_rosmarus.KB229369.1                             677254 1 -   3126709 I
e Nyctereutes_procyonoides.CAJHUB010000786.1                28048 1 +   3668941 I
e Noctilio_leporinus.NocLep_scaffold_12062                  47642 1 +     94413 I
e Neophocaena_asiaeorientalis.KZ688543.1                  3949368 1 -   4490290 I
e Neomonachus_schauinslandi.NINY01007774.1                4482598 1 -  14209539 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3398 1 -      8794 I
e Myotis_myotis.MyoMyo_scaffold_6123                         8522 1 +     66751 I
e Myotis_lucifugus.GL429887.1                             3463327 1 -   3747815 I
e Myotis_davidii.KB114863.1                               5017431 1 +   6462685 I
e Myotis_brandtii.KE161952.1                               965740 1 +   8389877 I
e Mustela_putorius.JH417978.1                             4421864 1 -  28371801 I
e Murina_feae.MurFea_scaffold_2254                          17420 1 -    100666 I
e Mungos_mungo.MunMun_flattened_line_8729                  142619 1 -    168139 I
e Moschus_moschiferus.MosMos_scaffold_146101                 2938 1 -      4346 I
e Mormoops_blainvillei.MorMeg_scaffold_2952                159526 1 +    265003 I
e Monodon_monoceros.MonMon_M_scaffold_5598                 144756 1 +    154973 I
e Mirounga_angustirostris.MirAng_flattened_line_8852         8999 1 -    104932 I
e Miniopterus_schreibersii.MinSch_scaffold_24116            32447 1 +     45743 I
e Miniopterus_natalensis.LDJU01000022.1                   8207776 1 +  10048721 I
e Micronycteris_hirsuta.MicHir_scaffold_37978               21016 1 -     32043 I
e Microgale_talazaci.MicTal_scaffold_34660                  29317 1 -     48017 I
e Mesoplodon_bidens.MesBid_scaffold_183284                   2031 1 +      2166 I
e Mellivora_capensis.MelCap_flattened_line_146202             293 1 -      1999 I
e Megaderma_lyra.MegLyr_scaffold_3562                       62595 1 -    234502 I
e Manis_pentadactyla.KN017078.1                             34504 1 +     58827 I
e Manis_javanica.JSZB01003966.1                            144432 1 +    252755 I
e Lycaon_pictus.CM007556.1                               11085055 1 +  39895028 I
e Loxodonta_africana.GL010040.1                          20589181 1 -  62548349 I
e Lipotes_vexillifer.KE558548.1                            134319 1 +   3060487 I
e Leptonychotes_weddellii.KB714749.1                      3083694 1 -   3498232 I
e Lasiurus_borealis.LasBor_scaffold_5102                   111904 1 -    115756 I
e Kogia_breviceps.KogBre_flattened_line_35920               21987 1 +     37189 I
e Inia_geoffrensis.IniGeo_flattened_line_66725               7161 1 +     17520 I
e Hyaena_hyaena.HyaHya_flattened_line_20729                 13979 1 -     67322 I
e Hipposideros_galeritus.HipGal_scaffold_104691              5912 1 -      9143 I
e Hipposideros_armiger.JXIK01001085.1                      276754 1 -    477199 I
e Hippopotamus_amphibius.HipAmp_scaffold_1308              145415 1 +    277961 I
e Heterohyrax_brucei.HetBruBak_scaffold_25354               54404 1 +     73687 I
e Hemitragus_hylocrius.HemHyl_scaffold_16669                25850 1 -     91191 I
e Helogale_parvula.HelPar_flattened_line_22962              14926 1 +     53719 I
e Giraffa_tippelskirchi.LVKQ01S012154.1                    179351 1 -    189561 I
e Felis_nigripes.FelNig_flattened_line_8080                 18891 1 +     52776 I
e Felis_catus_fca126.CM031420.1                         129277756 1 - 158578461 I
e Eubalaena_japonica.EubJap_flattened_line_7756             59804 1 +     89355 I
e Eschrichtius_robustus.EscRob_flattened_line_685          313374 1 +    330699 I
e Equus_przewalskii.ATBW01073585.1                          11002 1 +     92910 I
e Equus_caballus.CM000402.2                              13349512 1 +  41866177 I
e Equus_asinus.JREZ01000062.1                             5851010 1 -   7175178 I
e Enhydra_lutris.KZ291749.1                              85869482 1 +  99434291 I
e Elephantulus_edwardii.JH947210.1                        7804588 1 +  15467074 I
e Elaphurus_davidianus.JRFZ01086400.1                     1489836 1 +   1727528 I
e Eidolon_helvum.KE772537.1                                 10522 1 +     24177 I
e Echinops_telfairi.JH980316.1                           22994071 0 -  44670279 C
e Diceros_bicornis.DicBicMic_scaffold_9545                    919 1 +    151128 I
e Dicerorhinus_sumatrensis.PEKH010003161.1                 320275 1 +    993696 I
e Desmodus_rotundus.KZ672188.1                           18697149 1 -  18957592 I
e Delphinapterus_leucas.KZ290064.1                       80035172 1 -  96802777 I
e Dasypus_novemcinctus.JH568778.1                          180006 1 -   6883506 I
e Cryptoprocta_ferox.CryFer_flattened_line_19014            49717 1 -     70449 I
e Crocidura_indochinensis.CroInd_scaffold_38409             18034 1 -     19186 I
e Craseonycteris_thonglongyai.CraTho_scaffold_22679         37555 1 -     40477 I
e Condylura_cristata.JH655880.1                          60611097 1 +  78930452 I
e Choloepus_hoffmanni.KN194586.1                           760107 1 +    964067 I
e Choloepus_didactylus.ChoDid_scaffold_36182                14796 1 -     21363 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_160623         1372 1 -      9338 I
e Catagonus_wagneri.CatWag_scaffold_1305                   157137 1 -    276539 I
e Carollia_perspicillata.CarPer_scaffold_4436               57839 1 +     67245 I
e Capra_hircus.CM004562.1                               135704805 1 - 157403528 I
e Capra_aegagrus.CM003214.1                              21323578 1 + 157394656 I
e Canis_lupus_orion.HG994411.1                           16452623 1 -  44759192 I
e Canis_lupus_familiaris.chr31                           11085599 1 +  39895921 I
e Canis_lupus_dingo.QKWQ01001993.1                       11263070 1 -  35597290 I
e Canis_lupus_VD.CanFam_VD_scaffold_16982                   11427 1 +     87036 I
e CanFam4.chr31                                          11516409 1 +  39901454 I
e Camelus_ferus.KB016973.1                                2971331 1 +   6889770 I
e Camelus_dromedarius.KN271192.1                           395597 1 -  15254737 I
e Camelus_bactrianus.KN276303.1                           3217893 1 -   8989139 I
e Bubalus_bubalis.KI419065.1                              1229308 1 -   1914593 I
e Bos_taurus.CM000177.6                                 136293552 1 - 158972876 I
e Bos_mutus.JH883513.1                                     570193 1 -    998990 I
e Bos_indicus.CM003021.1                                138137819 1 - 161108492 I
e Bison_bison.KN264915.1                                  6557580 1 +   6870073 I
e Beatragus_hunteri.BeaHun_scaffold_21644                   41569 1 -     72089 I
e Balaenoptera_bonaerensis.DF502048.1                        3719 1 -     13118 I
e Balaenoptera_acutorostrata.KI537095.1                  26378488 1 +  51448160 I
e Artibeus_jamaicensis.ArtJam_scaffold_41619                 7040 1 -     29036 I
e Antilocapra_americana.AntAmePen_scaffold_42841            29074 1 +     33004 I
e Anoura_caudifer.AnoCau_scaffold_422                      388645 1 -    631301 I
e Ammotragus_lervia.NIVO01013474.1                        3518474 1 +   4113121 I
e Ailurus_fulgens.LNAC01000003.1                          7091750 1 -  16596857 I
e Ailuropoda_melanoleuca.LNAT01000321.1                  10655023 1 +  23371972 I
e Acinonyx_jubatus.LLWD01000356.1                         2031705 1 +   3721120 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16916 1 -    119109 I
e Glis_glis.GliGli_scaffold_79770                           10558 1 -     18683 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     13167 1 -     20485 I
e Jaculus_jaculus.JH725517.1                              8563457 1 +  11848649 I
e Hylobates_pileatus_a.tarseq_592                             30887 1 -     60944 I
e Hylobates_pileatus_b.ContigUN                                 14622394 1 -  25970782 I
e Allactaga_bullata.AllBul_scaffold_70162                   10717 1 -     22067 I
e Hylobates_muelleri.k141_1133650                            2283 1 -      2775 I
e Hylobates_klossii.k141_466549                              9293 1 +     11537 I
e Hylobates_agilis.k141_1485652                              1269 1 -      1697 I
e Hylobates_abbotti.k141_493872                              2848 1 +      5897 I
e Galeopterus_variegatus.GalVar_scaffold_354               154151 1 +    324696 I
e Microtus_ochrogaster.CM001673.1                        22817767 1 -  98408828 I
e Xerus_inauris.XerIna_scaffold_7898                       124930 1 -    134049 I
e Varecia_variegata.k141_775891                             22689 1 -     33872 I
e Varecia_rubra.k141_432109                                  3145 1 -     20643 I
e Tupaia_tana.TupTan_flattened_line_68454                    2569 1 +     13056 I
e Tupaia_chinensis.KB320831.1                             2790049 1 -   3938065 I
e Tarsius_wallacei.k141_48636                               57692 1 +     65473 I
e Tarsius_lariang.k141_609102                               24376 1 +     42269 I
e Spermophilus_dauricus.KZ294190.1                        2237832 1 +   2842873 I
e Sigmodon_hispidus.SigHis_scaffold_11332                   97594 1 -    120886 I
e Sapajus_macrocephalus.k141_966464                         19142 723 -     62485 T
e Sapajus_apella.ctg10                                   17339767 723 -  30362882 T
e Saimiri_ustus.k141_1282476                                 2309 1 -     76454 I
e Saimiri_sciureus.k141_1947592                              2372 1 +     60816 I
e Saimiri_oerstedii.k141_841116                              2394 1 +     67014 I
e Saimiri_macrodon.k141_2087127                              2299 1 -     60842 I
e Saimiri_cassiquiarensis.k141_808270                        2358 1 +     34089 I
e Saimiri_boliviensis.NW_024100938.1                     15670492 1 -  43202129 I
e Rattus_norvegicus.chr11                                13913381 1 +  90463843 I
e Psammomys_obesus.NESX01026517.1                           31405 1 +     77221 I
e Propithecus_verreauxi.k141_158021                         37003 1 -     48185 I
e Propithecus_tattersalli.k141_907138                       14731 1 -     53241 I
e Propithecus_perrieri.k141_7554                            15092 1 +     27322 I
e Propithecus_edwardsi.k141_1317105                         33171 1 -     44753 I
e Propithecus_diadema.k141_577245                           40782 1 +     52369 I
e Propithecus_coronatus.k141_1353159                         1448 1 +     11805 I
e Propithecus_coquerelli.NW_012147997.1                    664921 1 -   2312742 I
e Prolemur_simus.MPIZ01000048.1                           6846304 1 +  12164890 I
e Plecturocebus_moloch.k141_890597                          21032 1 -     75465 I
e Plecturocebus_miltoni.k141_841561                         10442 1 +    134592 I
e Plecturocebus_hoffmannsi.k141_1595076                      7482 1 +      8943 I
e Plecturocebus_grovesi.k141_242819                         20722 1 +    152463 I
e Plecturocebus_dubius.k141_3565563                          1369 1 -     55515 I
e Plecturocebus_cupreus.k141_1223294                        20903 1 -     23762 I
e Plecturocebus_cinerascens.k141_744510                     20653 1 +    147771 I
e Plecturocebus_caligatus.k141_2539816                      11048 1 -     98129 I
e Plecturocebus_brunneus.k141_498086                        20807 1 +     67491 I
e Plecturocebus_bernhardi.k141_959214                       20597 1 +     44506 I
e Pithecia_vanzolinii.k141_831006                           11165 1 -     31692 I
e Pithecia_pithecia.tarseq_313                           13472257 1 -  19735023 I
e Pithecia_pissinattii.k141_1102319                          3263 1 +      9673 I
e Pithecia_mittermeieri.k141_2119203                         9954 1 -     16101 I
e Pithecia_hirsuta.k141_1152968                              6756 1 -     15800 I
e Pithecia_chrysocephala.k141_159118                        22805 1 +     78826 I
e Pithecia_albicans.k141_991845                             41376 1 -     61926 I
e Peromyscus_maniculatus.KI615518.1                       4947973 1 -   8017169 I
e Perodicticus_potto.k141_713187                            22232 1 -     27972 I
e Perodicticus_ibeanus.k141_117958                           2933 1 -     23713 I
e Otolemur_garnettii.GL873528.1                          18006322 1 -  38779656 I
e Otolemur_crassicaudatus.k141_321880                       36880 1 +     38679 I
e Onychomys_torridus.OnyTor_scaffold_12578                  34797 1 +     62360 I
e Ondatra_zibethicus.OndZib_scaffold_6821                  123041 1 +    145789 I
e Octodon_degus.JH651621.1                                3683465 1 +  10294119 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65667259 1 +  89412551 I
e Nycticebus_coucang.k141_2051882                            1734 1 +      6470 I
e Nycticebus_bengalensis.LG16                            65564889 1 -  95554990 I
e Nannospalax_galili.KL201303.1                            108376 1 +    362372 I
e Myocastor_coypus.MyoCoy_scaffold_3653                     87993 1 -    117718 I
e Muscardinus_avellanarius.MusAve_scaffold_9643              9041 1 +     98495 I
e Mus_spretus.CM004110.1                                 74328498 1 +  97876770 I
e Mus_pahari.LT608305.1                                  67553488 1 +  89017189 I
e Mus_musculus.chr16                                     75487317 1 +  98207768 I
e Mus_caroli.LT608236.1                                  70764280 1 +  92629107 I
e Mirza_zaza.k141_226143                                     3453 1 +      8497 I
e Microcebus_murinus.CM007691.1                          16508048 1 +  47401472 I
e Mesocricetus_auratus.KB708139.1                         1044649 1 -  26018355 I
e Meriones_unguiculatus.MerUng_scaffold_52233                9866 1 +     15977 I
e Marmota_marmota.CZRN01000005.1                         36871756 1 +  64221397 I
e Macaca_tonkeana.k141_2870633                               2829 1 -     27140 I
e Macaca_nigra.k141_282495                                   2824 1 -     46448 I
e Macaca_maura.k141_251854                                  43877 1 -     79256 I
e Loris_tardigradus.ctg97                                 3776294 1 +   6799190 I
e Loris_lydekkerianus.k141_550999                            8543 1 +     84689 I
e Lepilemur_septentrionalis.k141_578524                     29438 1 -     33031 I
e Lepilemur_ruficaudatus.k141_617879                        76415 1 +    116806 I
e Lepilemur_dorsalis.k141_134267                            51173 1 +     63517 I
e Lepilemur_ankaranensis.k141_884009                        21800 1 +     39228 I
e Lemur_catta.scaffold_1                                258404928 1 - 285822530 I
e Lagothrix_lagothricha.k141_12968                          47893 1 -    147782 I
e Indri_indri.k141_1884019                                   1109 1 -      2196 I
e Ictidomys_tridecemlineatus.JH393315.1                   7123916 1 +  13083262 I
e Hystrix_cristata.HysCri_scaffold_50788                     4049 1 +     22540 I
e Heterocephalus_glaber.JH602058.1                        2548999 1 +  31725842 I
e Hapalemur_occidentalis.k141_797938                        43239 1 -     54384 I
e Hapalemur_meridionalis.k141_186231                        26645 1 -     42470 I
e Hapalemur_griseus.k141_1387522                             3370 1 +     56096 I
e Hapalemur_gilberti.k141_97962                             25908 1 +     26611 I
e Hapalemur_alaotrensis.k141_1198205                         3433 1 +      3980 I
e Graphiurus_murinus.GraMur_scaffold_4493                   75087 1 +    118900 I
e Galagoides_demidoff.k141_1769638                           8237 1 +     27357 I
e Galago_senegalensis.k141_964197                           11173 1 -     43889 I
e Galago_moholi.ctg555                                     208792 1 -    847004 I
e Fukomys_damarensis.KN123630.1                          13890613 1 -  19261668 I
e Eulemur_sanfordi.k141_186399                              13649 1 -     29447 I
e Eulemur_rufus.k141_1620292                                30926 1 +     46535 I
e Eulemur_rubriventer.k141_411740                           16202 1 +     26808 I
e Eulemur_mongoz.k141_825972                                13736 1 +     27497 I
e Eulemur_macaco.k141_1341545                               13460 1 +     16540 I
e Eulemur_fulvus.k141_653297                                 9081 1 +    109717 I
e Eulemur_flavifrons.k141_903901                             5598 1 +     60246 I
e Eulemur_coronatus.k141_3240342                             9284 1 +     36558 I
e Eulemur_collaris.k141_311830                               2808 1 -      6809 I
e Eulemur_albifrons.k141_715837                              2873 1 +     13586 I
e Ellobius_talpinus.LOJH01090055.1                           4580 1 -      7838 I
e Ellobius_lutescens.LOEQ01003611.1                        237567 1 -    369425 I
e Dolichotis_patagonum.DolPat_scaffold_14102                34015 1 -     73477 I
e Daubentonia_madagascariensis.ctg11                     16842694 1 +  31942871 I
e Dasyprocta_punctata.DasPun_flattened_line_634             56754 1 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                15271 1 +     26546 I
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 28443 1 -     67205 I
e Ctenodactylus_gundi.CteGun_scaffold_447                  206074 1 -    956709 I
e Cricetulus_griseus.LT883672.1                          53026909 1 +  72327488 I
e Cricetomys_gambianus.CriGam_scaffold_949                 275377 1 -    399297 I
e Chiropotes_sagulatus.k141_773804                          13064 1 +     40510 I
e Chiropotes_israelita.k141_1189915                         68884 1 +    196370 I
e Chinchilla_lanigera.JH721867.1                         15959664 1 +  43084221 I
e Cheracebus_torquatus.k141_315545                          44069 1 +     54541 I
e Cheracebus_regulus.k141_2128895                           39394 1 +     57117 I
e Cheracebus_lugens.k141_203936                             20355 1 +     25473 I
e Cheracebus_lucifer.k141_619653                             3332 1 -     18223 I
e Cheirogaleus_medius.k141_133808                            5868 1 +     13308 I
e Cheirogaleus_major.k141_1157592                           56826 1 -     68416 I
e Cephalopachus_bancanus.k141_702587                         5929 1 +     21754 I
e Cebus_unicolor.k141_239009                                11024 724 +     25043 T
e Cebus_olivaceus.k141_93739                                 6784 724 -     26817 T
e Cebus_albifrons.Contig22                               18889240 724 -  29618158 T
e Cavia_tschudii.CavTsc_scaffold_488                       174622 1 +    436027 I
e Cavia_porcellus.DS562889.1                             15796431 1 -  24440124 I
e Cavia_aperea.AVPZ01000278.1                            15784499 1 -  24422027 I
e Castor_canadensis.CasCan_scaffold_47037                   28325 1 +     33760 I
e Carlito_syrichta.NW_007248099.1                          306893 1 +    345090 I
e Capromys_pilorides.CapPil_scaffold_1557951                  358 1 +       644 I
e Cacajao_melanocephalus.k141_1160263                        5276 1 -    134917 I
e Cacajao_hosomi.k141_303789                                12736 1 -    216513 I
e Cacajao_calvus.k141_96166                                 10688 1 +    125063 I
e Cacajao_ayresi.k141_724503                               111662 1 -    171031 I
e Avahi_peyrierasi.k141_2689020                               841 1 +      2719 I
e Avahi_laniger.k141_2840928                                 4521 1 -     16375 I
e Ateles_paniscus.k141_1631200                               3769 1 -     25888 I
e Ateles_marginatus.k141_899112                             61818 1 +    119057 I
e Ateles_geoffroyi_a.k141_1300742                             13827 1 -     58268 I
e Ateles_chamek.k141_1072810                                 9322 1 +     89302 I
e Ateles_belzebuth.k141_1348307                             58323 1 +     85812 I
e Ateles_geoffroyi_b.tarseq_2582                             9537039 1 +  39197703 I
e Arctocebus_calabarensis.k141_1161114                      15740 1 +     17483 I
e Aotus_vociferans.k141_718647                               3777 1 +     23246 I
e Aotus_trivirgatus.k141_1740727                             3771 1 -    104377 I
e Aotus_nancymaae.KZ196176.1                              5747186 1 +   9889416 I
e Aotus_griseimembra.k141_3275623                            3228 1 +     22701 I
e Aotus_azarae.k141_3170768                                 60290 1 +     78111 I
e Alouatta_seniculus.k141_990213                             4570 1 +      6429 I
e Alouatta_puruensis.k141_1284840                            1640 1 -      4927 I
e Alouatta_palliata.k141_1316127                             7837 1 +     10410 I
e Alouatta_nigerrima.k141_2718643                            4551 1 +      7047 I
e Alouatta_macconnelli.k141_1331706                          7895 1 -     10438 I
e Alouatta_juara.k141_298055                                  609 28 +      1823 I
e Alouatta_discolor.k141_811576                              8604 1 -     21359 I
e Alouatta_caraya.k141_5460                                  9040 1 -     11521 I
e Alouatta_belzebul.k141_1818029                             7927 1 -     18050 I
e Acomys_cahirinus.AcoCah_scaffold_1625                    110288 1 -    189883 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               10375 28 +    209709 ttc-aagatactg--------tcttg-tcagcacaa---ag
s Acinonyx_jubatus.LLWD01000356.1                         2031706 28 +   3721120 CCC-AAGATACTG--------TCTTG-TCagcacaa---ag
i Acinonyx_jubatus.LLWD01000356.1                       I 1 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    110289 28 -    189883 TCT-AAAATACTG--------TCTTG-TCAGCACAA---CG
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 1 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10655024 28 +  23371972 CCC-AAGATACTG--------TCTTG-TCAGcacaa---ag
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 1 C 0
s Ailurus_fulgens.LNAC01000003.1                          7091751 28 -  16596857 CCC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Ailurus_fulgens.LNAC01000003.1                        I 1 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   10718 27 -     22067 TCT-AAGATACTG--------TCTTG-TCAGCA-AA---AG
i Allactaga_bullata.AllBul_scaffold_70162               I 1 C 0
s Allenopithecus_nigroviridis.k141_3103707                  60647 28 +     61638 TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Allenopithecus_nigroviridis.k141_3103707              I 5 C 0
s Allochrocebus_lhoesti.k141_4825038                        52455 28 +     53391 TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Allochrocebus_lhoesti.k141_4825038                    I 1 C 0
s Allochrocebus_preussi.k141_21781                            591 28 +      1343 TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Allochrocebus_preussi.k141_21781                      n 28 I 159
s Allochrocebus_solatus.k141_787528                          2755 28 +      3797 TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Allochrocebus_solatus.k141_787528                     I 1 C 0
s Alouatta_belzebul.k141_1818029                             7928 28 -     18050 TTC-GAGATACTG--------TCTTG-TCAGTACAA---AG
i Alouatta_belzebul.k141_1818029                        I 1 I 713
s Alouatta_caraya.k141_5460                                  9041 28 -     11521 TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG
i Alouatta_caraya.k141_5460                             I 1 I 713
s Alouatta_discolor.k141_811576                              8605 28 -     21359 TTC-GAGATACTG--------TCTTG-TCAGTACAA---AG
i Alouatta_discolor.k141_811576                         I 1 I 713
s Alouatta_juara.k141_1856473                                6982 28 +      7227 TTC-GAGATACTG--------TCTTG-TCAGTACAA---AG
i Alouatta_juara.k141_1856473                           I 12 C 0
s Alouatta_macconnelli.k141_1331706                          7896 28 -     10438 TTC-GAGATACTG--------TCTTG-TCAGTACAA---AG
i Alouatta_macconnelli.k141_1331706                     I 1 I 713
s Alouatta_nigerrima.k141_2718643                            4552 28 +      7047 TTC-GAGATACTG--------TCTTG-TCAGTACAA---AG
i Alouatta_nigerrima.k141_2718643                       I 1 I 713
s Alouatta_palliata.k141_1316127                             7838 28 +     10410 TTC-CAGATACTG--------TCTTG-TCAGTACAA---AG
i Alouatta_palliata.k141_1316127                        I 1 I 712
s Alouatta_puruensis.k141_1284840                            1641 28 -      4927 TTC-GAGATACTG--------TCTTG-TCAGTACAA---AG
i Alouatta_puruensis.k141_1284840                       I 1 I 713
s Alouatta_seniculus.k141_990213                             4571 28 +      6429 TTC-GAGATACTG--------TCTTG-TCAGTACAA---AG
i Alouatta_seniculus.k141_990213                        I 1 I 713
s Ammotragus_lervia.NIVO01013474.1                        3518475 28 +   4113121 CCC-AAGATACTG--------CCCTG-TCAGCACAA---AG
i Ammotragus_lervia.NIVO01013474.1                      I 1 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      388646 28 -    631301 CCC-AAAATACTG--------TCCTG-TCAGCACAA---AG
i Anoura_caudifer.AnoCau_scaffold_422                   I 1 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            29075 27 +     33004 CCC-AAGATACTG--------TCCTG-TCAGCACA----AG
i Antilocapra_americana.AntAmePen_scaffold_42841        I 1 C 0
s Aotus_azarae.k141_3170768                                 60291 28 +     78111 TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG
i Aotus_azarae.k141_3170768                             I 1 I 717
s Aotus_griseimembra.k141_3275623                            3229 28 +     22701 TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG
i Aotus_griseimembra.k141_3275623                       I 1 I 720
s Aotus_nancymaae.KZ196176.1                              5747187 28 +   9889416 TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG
i Aotus_nancymaae.KZ196176.1                            I 1 I 719
s Aotus_trivirgatus.k141_1740727                             3772 28 -    104377 TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG
i Aotus_trivirgatus.k141_1740727                        I 1 I 719
s Aotus_vociferans.k141_718647                               3778 28 +     23246 TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG
i Aotus_vociferans.k141_718647                          I 1 I 719
s Aplodontia_rufa.AprRuf_scaffold_156013                     1794 28 +      5067 TCC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Aplodontia_rufa.AprRuf_scaffold_156013                I 1 C 0
s Arctocebus_calabarensis.k141_1161114                      15741 28 +     17483 CTC-ACAATACTG--------TCGTG-TCAGCACAA---AG
i Arctocebus_calabarensis.k141_1161114                  I 1 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 7041 29 -     29036 CCC-CAAATGCTG--------TCCTG-TCAGCACAA--AAG
i Artibeus_jamaicensis.ArtJam_scaffold_41619            I 1 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9537040 28 +  39197703 TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG
i Ateles_geoffroyi_b.tarseq_2582                           I 1 I 701
s Ateles_belzebuth.k141_1348307                             58324 28 +     85812 TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG
i Ateles_belzebuth.k141_1348307                         I 1 I 701
s Ateles_chamek.k141_1072810                                 9323 28 +     89302 TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG
i Ateles_chamek.k141_1072810                            I 1 I 701
s Ateles_geoffroyi_a.k141_1300742                             13828 28 -     58268 TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG
i Ateles_geoffroyi_a.k141_1300742                         I 1 I 701
s Ateles_marginatus.k141_899112                             61819 28 +    119057 TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG
i Ateles_marginatus.k141_899112                         I 1 I 701
s Ateles_paniscus.k141_1631200                               3770 28 -     25888 TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG
i Ateles_paniscus.k141_1631200                          I 1 I 719
s Avahi_laniger.k141_2840928                                 4522 28 -     16375 TTC-ACAATACTG--------TCTTG-TCAGCACAA---AA
i Avahi_laniger.k141_2840928                            I 1 C 0
s Avahi_peyrierasi.k141_2689020                               842 28 +      2719 TTC-ACAATACTG--------TCTTT-TCAGCACAA---AA
i Avahi_peyrierasi.k141_2689020                         I 1 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26378489 28 +  51448160 ttc-aagatACTG--------TCCTG-Tcagcaaaa---ag
i Balaenoptera_acutorostrata.KI537095.1                 I 1 C 0
s Balaenoptera_bonaerensis.DF502048.1                        3720 28 -     13118 ttc-aagatACTG--------TCCTG-Tcagcaaaa---ag
i Balaenoptera_bonaerensis.DF502048.1                   I 1 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   41570 28 -     72089 CCC-AAGATACTG--------TTCTG-TCAGCACAA---AG
i Beatragus_hunteri.BeaHun_scaffold_21644               I 1 C 0
s Bison_bison.KN264915.1                                  6557581 28 +   6870073 CCC-AAGATACTG--------TCCTG-TCAGCACAA---AG
i Bison_bison.KN264915.1                                I 1 C 0
s Bos_indicus.CM003021.1                                138137820 28 - 161108492 CCC-AAGATACTG--------TCCTG-TCAGCACAA---AG
i Bos_indicus.CM003021.1                                I 1 C 0
s Bos_mutus.JH883513.1                                     570194 28 -    998990 CCC-AAGATACTG--------TCCTG-TCAGCACAA---AG
i Bos_mutus.JH883513.1                                  I 1 C 0
s Bos_taurus.CM000177.6                                 136293553 28 - 158972876 CCC-AAGATACTG--------TCCTG-TCAGCACAA---AG
i Bos_taurus.CM000177.6                                 I 1 C 0
s Bubalus_bubalis.KI419065.1                              1229309 28 -   1914593 CCC-AAGATACTG--------TCCTG-TCAACACAA---AG
i Bubalus_bubalis.KI419065.1                            I 1 C 0
s Cacajao_ayresi.k141_724503                               111663 28 -    171031 TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG
i Cacajao_ayresi.k141_724503                            I 1 I 720
s Cacajao_calvus.k141_96166                                 10689 28 +    125063 TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG
i Cacajao_calvus.k141_96166                             I 1 I 720
s Cacajao_hosomi.k141_303789                                12737 28 -    216513 TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG
i Cacajao_hosomi.k141_303789                            I 1 I 720
s Cacajao_melanocephalus.k141_1160263                        5277 28 -    134917 TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG
i Cacajao_melanocephalus.k141_1160263                   I 1 I 720
s Camelus_bactrianus.KN276303.1                           3217894 28 -   8989139 CCC-AAGATACTG--------TCCTG-TCAgcacaa---ag
i Camelus_bactrianus.KN276303.1                         I 1 C 0
s Camelus_dromedarius.KN271192.1                           395598 28 -  15254737 CCC-AAGATACTG--------TCCTG-TCAgcacaa---ag
i Camelus_dromedarius.KN271192.1                        I 1 C 0
s Camelus_ferus.KB016973.1                                2971332 28 +   6889770 CCC-AAGATACTG--------TCCTG-TCAgcacaa---ag
i Camelus_ferus.KB016973.1                              I 1 C 0
s CanFam4.chr31                                          11516410 28 +  39901454 CCC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i CanFam4.chr31                                         I 1 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   11428 28 +     87036 CCC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Canis_lupus_VD.CanFam_VD_scaffold_16982               I 1 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11263071 28 -  35597290 CCC-AAGATACTG--------TCTTG-TCAGcacaa---ag
i Canis_lupus_dingo.QKWQ01001993.1                      I 1 C 0
s Canis_lupus_familiaris.chr31                           11085600 28 +  39895921 CCC-AAGATACTG--------TCTTG-TCAGcacaa---ag
i Canis_lupus_familiaris.chr31                          I 1 C 0
s Canis_lupus_orion.HG994411.1                           16452624 28 -  44759192 CCC-AAGATACTG--------TCTTG-TCAGcacaa---ag
i Canis_lupus_orion.HG994411.1                          I 1 C 0
s Capra_aegagrus.CM003214.1                              21323579 28 + 157394656 CCC-AAGATACTG--------CCCTG-TCAGCACAA---AG
i Capra_aegagrus.CM003214.1                             I 1 C 0
s Capra_hircus.CM004562.1                               135704806 28 - 157403528 CCC-AAGATACTG--------CCCTG-TCAGCACAA---AG
i Capra_hircus.CM004562.1                               I 1 C 0
s Capromys_pilorides.CapPil_scaffold_1557951                  359 29 +       644 TCC-AAGATGCTA--------TCTCAGATAGCACAA---AG
i Capromys_pilorides.CapPil_scaffold_1557951            I 1 n 1
s Carlito_syrichta.NW_007248099.1                          306894 28 +    345090 TTC-AAGGTAGTG--------TCTTG-TCAGCACAA---GG
i Carlito_syrichta.NW_007248099.1                       I 1 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               57840 28 +     67245 CCC-CAAATACTG--------CCCTG-TCAGCACAA---AG
i Carollia_perspicillata.CarPer_scaffold_4436           I 1 C 0
s Castor_canadensis.CasCan_scaffold_47037                   28326 28 +     33760 TGC-AAGATACTG--------TCTTG-TCAGCACAA---AA
i Castor_canadensis.CasCan_scaffold_47037               I 1 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   157138 25 -    276539 CTC-AAGATACTG--------TCTTG-TCAGCACA------
i Catagonus_wagneri.CatWag_scaffold_1305                I 1 C 0
s Cavia_aperea.AVPZ01000278.1                            15784500 29 -  24422027 TCC-AAGATGCTG--------TTTTGGACAGCACAA---AG
i Cavia_aperea.AVPZ01000278.1                           I 1 C 0
s Cavia_porcellus.DS562889.1                             15796432 29 -  24440124 TCC-AAGATGCTG--------TTTTGGACAGCACAA---AG
i Cavia_porcellus.DS562889.1                            I 1 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       174623 29 +    436027 TCC-AAGATGCTG--------TTTTGGACAGCACAA---AG
i Cavia_tschudii.CavTsc_scaffold_488                    I 1 C 0
s Cebus_albifrons.Contig22                               18888516 28 -  29618158 TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG
i Cebus_albifrons.Contig22                              T 724 I 724
s Cebus_olivaceus.k141_93739                                 6060 28 -     26817 TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG
i Cebus_olivaceus.k141_93739                            T 724 I 724
s Cebus_unicolor.k141_239009                                10300 28 +     25043 TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG
i Cebus_unicolor.k141_239009                            T 724 I 724
s Cephalopachus_bancanus.k141_702587                         5930 28 +     21754 TTC-AAGGTAGTG--------TCTTG-TCAGCACAA---GG
i Cephalopachus_bancanus.k141_702587                    I 1 C 0
s Ceratotherium_simum.JH767818.1                          4361618 28 +   7569818 CCC-AAGATACTG--------TCGCG-TCAgcacaa---ag
i Ceratotherium_simum.JH767818.1                        I 1 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         1373 28 -      9338 CCC-AAGATACTG--------TCGCG-TCAGCACAA---AG
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    I 1 C 0
s Cercocebus_atys.KQ010443.1                              6552439 28 +   6739814 TTC-AAGATACTG--------TCTTG-TCAGCACAA---GG
i Cercocebus_atys.KQ010443.1                            T 1237 I 1237
s Cercocebus_chrysogaster.k141_2951608                      53916 28 -     54931 TTC-AAGATACTG--------TCTTG-TCAGCACAA---GG
i Cercocebus_chrysogaster.k141_2951608                  I 47 C 0
s Cercocebus_lunulatus.k141_3387186                         18900 28 -     19697 TTC-AAGATACTG--------TCTTG-TCAGCACAA---GG
i Cercocebus_lunulatus.k141_3387186                     I 105 C 0
s Cercocebus_torquatus.k141_3969582                         56431 28 -    107033 TTC-AAGATACTG--------TCTTG-TCAGCACAA---GG
i Cercocebus_torquatus.k141_3969582                     T 1237 I 1237
s Cercopithecus_ascanius.k141_4123525                         562 28 -     17608 TTC-GAGATACTG--------TCTTG-TCAGCACAA---AG
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          26809 28 +     30494 TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Cercopithecus_cephus.k141_598190                      T 1251 I 1251
s Cercopithecus_diana.k141_1490386                           2833 28 -      4022 TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Cercopithecus_diana.k141_1490386                      I 1 C 0
s Cercopithecus_hamlyni.k141_381099                          2725 28 -      3505 TTC-AAGATACTG--------TCTTG-CCAGCACAA---AG
i Cercopithecus_hamlyni.k141_381099                     I 1 C 0
s Cercopithecus_lowei.k141_623764                           21515 28 +     35983 TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Cercopithecus_lowei.k141_623764                       T 1247 I 1247
s Cercopithecus_albogularis.ctg51                              11988052 28 +  12117833 TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Cercopithecus_albogularis.ctg51                             T 1241 I 1241
s Cercopithecus_mona.ctg12                               46474805 28 +  46592721 TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Cercopithecus_mona.ctg12                              T 1243 I 1243
s Cercopithecus_neglectus.k141_1474992                      32632 28 +     33420 TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Cercopithecus_neglectus.k141_1474992                  I 61 C 0
s Cercopithecus_nictitans.k141_675209                        2668 28 -      3443 TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Cercopithecus_nictitans.k141_675209                   I 61 C 0
s Cercopithecus_petaurista.k141_2037881                      3659 28 -      4669 TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Cercopithecus_petaurista.k141_2037881                 I 61 C 0
s Cercopithecus_pogonias.k141_1977419                        3454 28 -      4411 TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Cercopithecus_pogonias.k141_1977419                   I 1 C 0
s Cercopithecus_roloway.k141_3372345                         2984 28 -      4205 TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Cercopithecus_roloway.k141_3372345                    I 61 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_1070855          1197 28 -      1715 TCC-ATGATACTG--------TCCTG-TCAGCAAAA---AG
i Chaetophractus_vellerosus.ChaVel_scaffold_1070855     I 1 C 0
s Cheirogaleus_major.k141_1157592                           56827 28 -     68416 TTC-ACAATACTG--------TCTTG-TCAGCACAA---AG
i Cheirogaleus_major.k141_1157592                       I 1 C 0
s Cheirogaleus_medius.k141_133808                            5869 28 +     13308 TTC-ACAATACTG--------TCTTG-TCAGCACAA---AG
i Cheirogaleus_medius.k141_133808                       I 1 C 0
s Cheracebus_lucifer.k141_619653                             3333 28 -     18223 TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG
i Cheracebus_lucifer.k141_619653                        I 1 I 699
s Cheracebus_lugens.k141_203936                             20356 28 +     25473 TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG
i Cheracebus_lugens.k141_203936                         I 1 I 699
s Cheracebus_regulus.k141_2128895                           39395 28 +     57117 TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG
i Cheracebus_regulus.k141_2128895                       I 1 I 699
s Cheracebus_torquatus.k141_315545                          44070 28 +     54541 TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG
i Cheracebus_torquatus.k141_315545                      I 1 I 699
s Chinchilla_lanigera.JH721867.1                         15959665 29 +  43084221 TCC-AAGATGCTG--------TCTTGGACAGCACAA---AG
i Chinchilla_lanigera.JH721867.1                        I 1 C 0
s Chiropotes_israelita.k141_1189915                         68885 28 +    196370 TTC-AAGATACTA--------TCTTG-TCAGTACAA---AG
i Chiropotes_israelita.k141_1189915                     I 1 I 707
s Chiropotes_sagulatus.k141_773804                          13065 28 +     40510 TTC-AAGATACTA--------TCTTG-TCAGTACAA---AG
i Chiropotes_sagulatus.k141_773804                      I 1 I 707
s Chlorocebus_aethiops.ctg22                             15136266 28 -  15256731 TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Chlorocebus_aethiops.ctg22                            T 1257 I 1257
s Chlorocebus_pygerythrus.k141_1486215                      31312 28 -     53260 TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Chlorocebus_pygerythrus.k141_1486215                  T 1258 I 1258
s Chlorocebus_sabaeus.CM001963.2                        101141761 28 + 101219884 TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Chlorocebus_sabaeus.CM001963.2                        T 1372 I 1372
s Choloepus_didactylus.ChoDid_scaffold_36182                14797 28 -     21363 TCA-AAGATACTG--------TCCTG-TCAGCACAA---AG
i Choloepus_didactylus.ChoDid_scaffold_36182            I 1 C 0
s Choloepus_hoffmanni.KN194586.1                           760108 28 +    964067 TCA-AAGATACTG--------TCCTG-TCAGcacaa---ag
i Choloepus_hoffmanni.KN194586.1                        I 1 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_141308              6908 28 -     12508 TCC-AAGATACTG--------TCCTG-TCAGCACAA---AC
i Chrysochloris_asiatica.ChrAsi_scaffold_141308         I 1 C 0
s Colobus_angolensis.KN985967.1                          10880340 28 +  10971483 TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Colobus_angolensis.KN985967.1                         T 4556 I 4556
s Colobus_guereza.LG08                                  147661498 28 + 156195979 TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Colobus_guereza.LG08                                  T 1562 I 1562
s Colobus_polykomos.k141_1406057                            13485 28 +     23629 TTC-AAGATACTG--------TCTCG-TCAGCACAA---AG
i Colobus_polykomos.k141_1406057                        T 1559 I 1559
s Condylura_cristata.JH655880.1                          60611098 28 +  78930452 CCC-AAGATACTG--------TCCTG-TCagcataa---ag
i Condylura_cristata.JH655880.1                         I 1 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         37556 27 -     40477 CCC-AA-ATACTG--------CCTTG-TCAGCAGAA---AG
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     I 1 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 275378 28 -    399297 TAT-AGGATACTG--------TCTTG-TCAGCACAA---AG
i Cricetomys_gambianus.CriGam_scaffold_949              I 1 C 0
s Cricetulus_griseus.LT883672.1                          53026910 28 +  72327488 TAT-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Cricetulus_griseus.LT883672.1                         I 1 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             18035 27 -     19186 ATC-C-TGTACTG--------TCTTG-TCAGCACAA---AG
i Crocidura_indochinensis.CroInd_scaffold_38409         I 1 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            49718 28 -     70449 CCC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 1 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  206075 28 -    956709 TCC-AAGACACTG--------TCCTG-TCAGCACAA---AG
i Ctenodactylus_gundi.CteGun_scaffold_447               I 1 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 28444 29 -     67205 TCC-AAGATGCTG--------TCTGAGGCAGCACAA---AG
i Ctenomys_sociabilis.CteSoc_scaffold_19489             I 1 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                15272 29 +     26546 TCC-AAGATGCTG--------TCTTGGACAGCACAA---AG
i Cuniculus_paca.CunPac_flattened_line_16637            I 1 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             56755 29 -    236241 TCC-AAGATGCTG--------TCTTGGACAGCACAA---AG
i Dasyprocta_punctata.DasPun_flattened_line_634         I 1 C 0
s Dasypus_novemcinctus.JH568778.1                          180007 28 -   6883506 TCC-AAGATACTG--------CGCTG-Tcagcaaaa---ag
i Dasypus_novemcinctus.JH568778.1                       I 1 C 0
s Daubentonia_madagascariensis.ctg11                     16842695 28 +  31942871 TTC-ACAATACTG--------TCTTG-TCAGCACAA---AG
i Daubentonia_madagascariensis.ctg11                    I 1 C 0
s Delphinapterus_leucas.KZ290064.1                       80035173 28 -  96802777 ttc-aagatACTG--------TCCAG-Tcagcaaaa---ag
i Delphinapterus_leucas.KZ290064.1                      I 1 C 0
s Desmodus_rotundus.KZ672188.1                           18697150 28 -  18957592 ccc-aaaaTACTG--------TCTTG-CCAGCACAA---AG
i Desmodus_rotundus.KZ672188.1                          I 1 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 320276 28 +    993696 CCC-AAGATACTG--------TCGCG-TCAGCACAA---AG
i Dicerorhinus_sumatrensis.PEKH010003161.1              I 1 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                    920 28 +    151128 CCC-AAGATACTG--------TCGCG-TCAGCACAA---AA
i Diceros_bicornis.DicBicMic_scaffold_9545              I 1 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   155548 29 +    228994 TCC-AAGATGCTG--------TCTTGGACAACACGA---AG
i Dinomys_branickii.DinBra_scaffold_1996                I 1 C 0
s Dipodomys_ordii.KN672545.1                              3653297 28 +   4240102 TTT-AAGATACTG--------TCTAG-TCTGCATAA---AG
i Dipodomys_ordii.KN672545.1                            I 1 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 24852 25 +     28912 ----AAGATACTG--------TCTAG-TCTGCATAA---AG
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                34016 29 -     73477 TCC-AAGATGCTG--------TCTTGGATAGCACAA---AG
i Dolichotis_patagonum.DolPat_scaffold_14102            I 1 C 0
s Eidolon_helvum.KE772537.1                                 10523 28 +     24177 CCC-TAGATACTG--------TCCCA-TCAGcacaa---ag
i Eidolon_helvum.KE772537.1                             I 1 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1489837 28 +   1727528 CGC-AAGATACTG--------TCCTG-TCAGCACAA---AG
i Elaphurus_davidianus.JRFZ01086400.1                   I 1 C 0
s Elephantulus_edwardii.JH947210.1                        7804589 28 +  15467074 TCC-AAGATACTG--------TCCTG-TCAGCACAA---AG
i Elephantulus_edwardii.JH947210.1                      I 1 C 0
s Ellobius_lutescens.LOEQ01003611.1                        237568 28 -    369425 TAT-AAGATACTG--------TCTTG-TCAGCGCAA---AG
i Ellobius_lutescens.LOEQ01003611.1                     I 1 C 0
s Ellobius_talpinus.LOJH01090055.1                           4581 28 -      7838 TAT-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Ellobius_talpinus.LOJH01090055.1                      I 1 C 0
s Enhydra_lutris.KZ291749.1                              85869483 28 +  99434291 CCC-AAGATACTG--------TCTTG-TCAGcacaa---ag
i Enhydra_lutris.KZ291749.1                             I 1 C 0
s Eptesicus_fuscus.JH977687.1                             4702111 27 +   6522550 C-T-CAAATACTG--------TCCTA-TCAGCACCA---AA
i Eptesicus_fuscus.JH977687.1                           I 1 C 0
s Equus_asinus.JREZ01000062.1                             5851011 28 -   7175178 CCT-AAGATCCTG--------TCATG-TCAGcacaa---ag
i Equus_asinus.JREZ01000062.1                           I 1 C 0
s Equus_caballus.CM000402.2                              13349513 28 +  41866177 CCT-AAGATCCTG--------TCATG-TCAGCACAA---AG
i Equus_caballus.CM000402.2                             I 1 C 0
s Equus_przewalskii.ATBW01073585.1                          11003 28 +     92910 CCT-AAGATCCTG--------TCATG-TCAGCACAA---AG
i Equus_przewalskii.ATBW01073585.1                      I 1 C 0
s Erinaceus_europaeus.JH835290.1                         11530800 28 +  16010500 CGG-GAGATACTG--------GCCTG-TCAGCACAC---AG
i Erinaceus_europaeus.JH835290.1                        I 1 C 0
s Erythrocebus_patas.Contig8                             48768444 28 -  48907691 TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Erythrocebus_patas.Contig8                            T 1259 I 1259
s Eschrichtius_robustus.EscRob_flattened_line_685          313375 28 +    330699 TTC-AAGATACTG--------TCCTG-TCAGCAAAA---AG
i Eschrichtius_robustus.EscRob_flattened_line_685       I 1 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             59805 28 +     89355 TTC-AAGATACTG--------TCCTG-TCAGCAAAA---AG
i Eubalaena_japonica.EubJap_flattened_line_7756         I 1 C 0
s Eulemur_albifrons.k141_715837                              2874 28 +     13586 TTC-ACAATACTG--------TCTTG-TCAGCACAA---AG
i Eulemur_albifrons.k141_715837                         I 1 C 0
s Eulemur_collaris.k141_311830                               2809 28 -      6809 TTC-ACAATACTG--------TCTTG-TCAGCACAA---AG
i Eulemur_collaris.k141_311830                          I 1 C 0
s Eulemur_coronatus.k141_3240342                             9285 28 +     36558 TTC-ACAATACTG--------TCTTG-TCAGCACAA---AG
i Eulemur_coronatus.k141_3240342                        I 1 C 0
s Eulemur_flavifrons.k141_903901                             5599 28 +     60246 TTC-ACAATACTG--------TCTTG-TCAGCACAA---AG
i Eulemur_flavifrons.k141_903901                        I 1 C 0
s Eulemur_fulvus.k141_653297                                 9082 28 +    109717 TTC-ACAATACTG--------TCTTG-TCAGCACAA---AG
i Eulemur_fulvus.k141_653297                            I 1 C 0
s Eulemur_macaco.k141_1341545                               13461 28 +     16540 TTC-ACAATACTG--------TCTTG-TCAGCACAA---AG
i Eulemur_macaco.k141_1341545                           I 1 C 0
s Eulemur_mongoz.k141_825972                                13737 28 +     27497 TTC-ACAATACTG--------TCTTG-TCAGCACAA---AG
i Eulemur_mongoz.k141_825972                            I 1 C 0
s Eulemur_rubriventer.k141_411740                           16203 28 +     26808 TTC-ACAATACTG--------CCTTG-TCAGCACAA---AG
i Eulemur_rubriventer.k141_411740                       I 1 C 0
s Eulemur_rufus.k141_1620292                                30927 28 +     46535 TTC-ACAATACTG--------TCTTG-TCAGCACAA---AG
i Eulemur_rufus.k141_1620292                            I 1 C 0
s Eulemur_sanfordi.k141_186399                              13650 28 -     29447 TTC-ACAATACTG--------TCTTG-TCAGCACAA---AG
i Eulemur_sanfordi.k141_186399                          I 1 C 0
s Felis_catus.CM001386.2                                129890682 28 - 159252932 CCC-AAGATACTG--------TCTTG-TCagcacaa---ag
i Felis_catus.CM001386.2                                I 1 C 0
s Felis_catus_fca126.CM031420.1                         129277757 28 - 158578461 CCC-AAGATACTG--------TCTTG-TCagcacaa---ag
i Felis_catus_fca126.CM031420.1                         I 1 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 18892 28 +     52776 CCC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Felis_nigripes.FelNig_flattened_line_8080             I 1 C 0
s Fukomys_damarensis.KN123630.1                          13890614 28 -  19261668 TCC-AAGATGCTG--------TCTTG-TCAGCACAA---AG
i Fukomys_damarensis.KN123630.1                         I 1 C 0
s Galago_moholi.ctg555                                     208793 28 -    847004 CTC-CCAATACTG--------TCATG-TCAGCACAA---AG
i Galago_moholi.ctg555                                  I 1 C 0
s Galago_senegalensis.k141_964197                           11174 28 -     43889 CTC-CCAATACTG--------TCATG-TCAGCACAA---AG
i Galago_senegalensis.k141_964197                       I 1 C 0
s Galagoides_demidoff.k141_1769638                           8238 28 +     27357 CTC-CCAATACTG--------TCATG-TCAGCACAA---AG
i Galagoides_demidoff.k141_1769638                      I 1 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               154152 28 +    324696 TCT-GAGATCCTG--------TCTTG-TCAGCACAA---AG
i Galeopterus_variegatus.GalVar_scaffold_354            I 1 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    179352 28 -    189561 CCC-AAGATACTG--------TCCTG-TCAGCACAA---AG
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 1 C 0
s Glis_glis.GliGli_scaffold_79770                           10559 28 -     18683 GCC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Glis_glis.GliGli_scaffold_79770                       I 1 C 0
s Gorilla_beringei.k141_111300                               3032 28 -     14630 TTC-AGGATACTG--------TCTTG-TCAGCACAA---AG
i Gorilla_beringei.k141_111300                          T 743 I 743
s Gorilla_gorilla.LT578340.1                            119650131 28 - 195582420 TTC-AGGATACTG--------TCTTG-TCAGCACAA---AG
i Gorilla_gorilla.LT578340.1                            T 743 I 743
s Graphiurus_murinus.GraMur_scaffold_4493                   75088 28 +    118900 GCC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Graphiurus_murinus.GraMur_scaffold_4493               I 1 C 0
s Hapalemur_alaotrensis.k141_1198205                         3434 28 +      3980 TTC-ACAATACTG--------TCTTG-TCAGCACAA---AG
i Hapalemur_alaotrensis.k141_1198205                    I 1 C 0
s Hapalemur_gilberti.k141_97962                             25909 28 +     26611 TTC-ACAATACTG--------TCTTG-TCAGCACAA---AG
i Hapalemur_gilberti.k141_97962                         I 1 C 0
s Hapalemur_griseus.k141_1387522                             3371 28 +     56096 TTC-ACAATACTG--------TCTTG-TCAGCACAA---AG
i Hapalemur_griseus.k141_1387522                        I 1 C 0
s Hapalemur_meridionalis.k141_186231                        26646 28 -     42470 TTC-ACAATACTG--------TCTTG-TCAGCACAA---AG
i Hapalemur_meridionalis.k141_186231                    I 1 C 0
s Hapalemur_occidentalis.k141_797938                        43240 28 -     54384 TTC-ACAATACTG--------TCTTG-TCAGCACAA---AG
i Hapalemur_occidentalis.k141_797938                    I 1 C 0
s Helogale_parvula.HelPar_flattened_line_22962              14927 28 +     53719 CCC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Helogale_parvula.HelPar_flattened_line_22962          I 1 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                25851 28 -     91191 CCC-AAGATACTG--------TCCTG-TCAGCACAA---AG
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 1 C 0
s Heterocephalus_glaber.JH602058.1                        2549000 28 +  31725842 TCC-AAGATGCTG--------TCTTG-TCAGCACAA---AG
i Heterocephalus_glaber.JH602058.1                      I 1 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               54405 28 +     73687 TCC-AAGATACTG--------CTCTC-TCAGCACAA---AG
i Heterohyrax_brucei.HetBruBak_scaffold_25354           I 1 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              145416 28 +    277961 CCC-AAGATACTG--------TCCTG-TCAGCAAAA---AG
i Hippopotamus_amphibius.HipAmp_scaffold_1308           I 1 C 0
s Hipposideros_armiger.JXIK01001085.1                      276755 28 -    477199 CCC-AAGATACCG--------TCTTG-TCAGcataa---ag
i Hipposideros_armiger.JXIK01001085.1                   I 1 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              5913 28 -      9143 TCC-AAGATACTG--------TCTTG-TCAGCATAA---AG
i Hipposideros_galeritus.HipGal_scaffold_104691         I 1 C 0
s Hoolock_leuconedys.ctg649                                    99712 28 +    115816 TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Hoolock_leuconedys.ctg649                                I 12 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 13980 28 -     67322 CCC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Hyaena_hyaena.HyaHya_flattened_line_20729             I 1 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16917 29 -    119109 TCC-AAGATGCTG--------TCTTGGGCAGCACAA---AG
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       I 1 C 0
s Hylobates_abbotti.k141_493872                              2849 28 +      5897 TTC-AAGATACTG--------GCTTG-TCAGCACAA---AG
i Hylobates_abbotti.k141_493872                         I 1 C 0
s Hylobates_agilis.k141_1485652                              1270 28 -      1697 TTC-AAGATACTG--------GCTTG-TCAGCACAA---AG
i Hylobates_agilis.k141_1485652                         I 1 C 0
s Hylobates_klossii.k141_466549                              9294 28 +     11537 TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Hylobates_klossii.k141_466549                         I 1 C 0
s Hylobates_pileatus_b.ContigUN                                 14622395 28 -  25970782 TTC-AAGATACTG--------GCTTG-TCAGCACAA---AG
i Hylobates_pileatus_b.ContigUN                                I 1 C 0
s Hylobates_muelleri.k141_1133650                            2284 28 -      2775 TTC-AAGATACTA--------GCTTG-TCAGCACAA---AG
i Hylobates_muelleri.k141_1133650                       I 1 C 0
s Hylobates_pileatus_a.tarseq_592                             30888 28 -     60944 TTC-AAGATACTG--------GCTTG-TCAGCACAA---AG
i Hylobates_pileatus_a.tarseq_592                         I 1 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     4050 28 +     22540 CTC-CAGATCCTG--------CCTTG-TCAGCACAA---AG
i Hystrix_cristata.HysCri_scaffold_50788                I 1 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7123917 28 +  13083262 TCC-AAGAGACTG--------TCTTG-TCAgcacaa---ag
i Ictidomys_tridecemlineatus.JH393315.1                 I 1 C 0
s Indri_indri.k141_1884019                                   1110 28 -      2196 TTC-ACAATACTG--------TCTTG-TCAGCACAA---AG
i Indri_indri.k141_1884019                              I 1 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               7162 28 +     17520 TTC-AAGATACTG--------CCCTG-TCAGCAAAA---AG
i Inia_geoffrensis.IniGeo_flattened_line_66725          I 1 C 0
s Jaculus_jaculus.JH725517.1                              8563458 27 +  11848649 TCT-AAGATACTG--------TCTTG-TCAGCA-AA---AG
i Jaculus_jaculus.JH725517.1                            I 1 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               21988 28 +     37189 TTC-AAGATACTG--------TCCTG-TCAGCAAAA---AG
i Kogia_breviceps.KogBre_flattened_line_35920           I 1 C 0
s Lagothrix_lagothricha.k141_12968                          47894 28 -    147782 TTT-AAGATACTG--------TCTTG-TCAGTACAA---AG
i Lagothrix_lagothricha.k141_12968                      I 1 I 716
s Lasiurus_borealis.LasBor_scaffold_5102                   111905 27 -    115756 C-T-CAAATACTG--------TCCTA-TCAGCACCA---AA
i Lasiurus_borealis.LasBor_scaffold_5102                I 1 C 0
s Lemur_catta.scaffold_1                                258404929 28 - 285822530 TTC-ACAATACTG--------TCTTG-TCAGCACAA---AG
i Lemur_catta.scaffold_1                                I 1 C 0
s Lepilemur_ankaranensis.k141_884009                        21801 28 +     39228 TTC-ACAATACTG--------TCTTG-TCAGCACAA---AG
i Lepilemur_ankaranensis.k141_884009                    I 1 C 0
s Lepilemur_dorsalis.k141_134267                            51174 28 +     63517 TTC-ACAATACTG--------TCTTG-TCAGCACAA---AG
i Lepilemur_dorsalis.k141_134267                        I 1 C 0
s Lepilemur_ruficaudatus.k141_617879                        76416 28 +    116806 TTC-ACAATACTG--------TCTTG-TCAGCACAA---AG
i Lepilemur_ruficaudatus.k141_617879                    I 1 C 0
s Lepilemur_septentrionalis.k141_578524                     29439 28 -     33031 TTC-ACAATACTG--------TCTTG-TCAGCACAA---AG
i Lepilemur_septentrionalis.k141_578524                 I 1 C 0
s Leptonychotes_weddellii.KB714749.1                      3083695 28 -   3498232 CCC-AAGATACTG--------TCTTG-TCAGcacaa---ag
i Leptonychotes_weddellii.KB714749.1                    I 1 C 0
s Lepus_americanus.LepAme_scaffold_62849                    10905 28 +     22452 TCT-GAGATACTG--------TCTTG-TCAGCACAA---AG
i Lepus_americanus.LepAme_scaffold_62849                I 1 C 0
s Lipotes_vexillifer.KE558548.1                            134320 28 +   3060487 TTC-AAGATACTG--------TCCTG-Tcagcaaaa---ag
i Lipotes_vexillifer.KE558548.1                         I 1 C 0
s Lophocebus_aterrimus.ctg55                             19246765 28 +  19376315 TTC-AAGATACTG--------TCTTG-TCAGCACAG---AG
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            8544 28 +     84689 CTC-ACAGTACCT--------TCCTG-TCAGCACAA---AG
i Loris_lydekkerianus.k141_550999                       I 1 C 0
s Loris_tardigradus.ctg97                                 3776295 28 +   6799190 CTC-ACAGTACCA--------TTCTG-TCAGCACAA---AG
i Loris_tardigradus.ctg97                               I 1 C 0
s Loxodonta_africana.GL010040.1                          20589182 28 -  62548349 TCC-AAGATACTG--------TCCTG-TCAGCACAA---AG
i Loxodonta_africana.GL010040.1                         I 1 C 0
s Lycaon_pictus.CM007556.1                               11085056 28 +  39895028 CCC-AAGATACTG--------TCTTG-TCAGcacaa---ag
i Lycaon_pictus.CM007556.1                              I 1 C 0
s Macaca_arctoides.k141_2201161                             17213 28 +     74745 TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Macaca_arctoides.k141_2201161                         T 1241 I 1241
s Macaca_assamensis.Contig65                             12703719 28 +  12821369 TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Macaca_assamensis.Contig65                            T 1252 I 1252
s Macaca_cyclopis.k119_1168412                               5815 28 +      6569 TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Macaca_cyclopis.k119_1168412                          T 614 C 0
s Macaca_fascicularis.k141_155037                           44117 28 +     63263 TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Macaca_fascicularis.k141_155037                       T 1250 I 1250
s Macaca_fuscata.k119_599327                                  133 28 -      2568 TTT-GAGATACTG--------TCTCG-TCAGCACAA---AG
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_3421209                                2266 28 +      3017 TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Macaca_leonina.k141_3421209                           I 1 C 0
s Macaca_maura.k141_251854                                  43878 28 -     79256 TTT-GAGATACTG--------TCTCG-TCAGCACAA---AG
i Macaca_maura.k141_251854                              I 1 C 0
s Macaca_mulatta.NC_041755.1                            196032796 28 + 196197964 TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Macaca_mulatta.NC_041755.1                            T 1252 I 1252
s Macaca_nemestrina.KQ004885.1                           11442902 28 +  11645122 TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Macaca_nemestrina.KQ004885.1                          T 1251 I 1251
s Macaca_nigra.k141_282495                                   2825 28 -     46448 TTT-GAGATACTG--------TCTCG-TCAGCACAA---AG
i Macaca_nigra.k141_282495                              I 1 C 0
s Macaca_radiata.k141_1580474                                2656 28 -      3617 TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Macaca_radiata.k141_1580474                           I 1 C 0
s Macaca_siberu.k141_741907                                 12988 28 -     55006 TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Macaca_siberu.k141_741907                             T 1251 I 1251
s Macaca_silenus.Contig12                                43838025 28 +  43892939 TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Macaca_silenus.Contig12                               T 1251 I 1251
s Macaca_thibetana.k99_116940                                5247 28 -      5978 TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Macaca_thibetana.k99_116940                           I 61 C 0
s Macaca_tonkeana.k141_2870633                               2830 28 -     27140 TTT-GAGATACTG--------TCTCG-TCAGCACAA---AG
i Macaca_tonkeana.k141_2870633                          I 1 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                699941 28 +    802869 CCC-TAGATACTG--------TCCCA-TCAGCACAA---AG
i Macroglossus_sobrinus.MacSob_scaffold_879             I 1 C 0
s Mandrillus_leucophaeus.scaffold125                     43434687 28 -  43563597 TTC-AAGATACTG--------TCCTG-TCAGCACAA---GG
i Mandrillus_leucophaeus.scaffold125                    T 1238 I 1238
s Mandrillus_sphinx.Contig144                             4447513 28 -   4543643 TTC-AAGATACTG--------TCTTG-TCAGCACAA---GG
i Mandrillus_sphinx.Contig144                           T 1238 I 1238
s Manis_javanica.JSZB01003966.1                            144433 28 +    252755 CCC-AAGATACTG--------TCCTG-TCAGCAGAA---AG
i Manis_javanica.JSZB01003966.1                         I 1 C 0
s Manis_pentadactyla.KN017078.1                             34505 28 +     58827 CCC-AAGATACTG--------TCCTG-TCAGCAGAA---AG
i Manis_pentadactyla.KN017078.1                         I 1 C 0
s Marmota_marmota.CZRN01000005.1                         36871757 28 +  64221397 TCC-AAGAGACTG--------TCTTG-TCAGcacaa---ag
i Marmota_marmota.CZRN01000005.1                        I 1 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       62596 27 -    234502 CCC-AA-GTACTG--------TCCTG-TCAGCATAA---AG
i Megaderma_lyra.MegLyr_scaffold_3562                   I 1 C 0
s Mellivora_capensis.MelCap_flattened_line_146202             294 28 -      1999 CCC-AAGATACTG--------TCTTG-TCAGCACAA---AA
i Mellivora_capensis.MelCap_flattened_line_146202       I 1 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233                9867 28 +     15977 TCT-AAGATACTG--------TCTTG-TCAGCACAG---CA
i Meriones_unguiculatus.MerUng_scaffold_52233           I 1 C 0
s Mesocricetus_auratus.KB708139.1                         1044650 28 -  26018355 AAT-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Mesocricetus_auratus.KB708139.1                       I 1 C 0
s Mesoplodon_bidens.MesBid_scaffold_183284                   2032 28 +      2166 TTC-AAGATACTG--------TCCTG-TCAGCAAAA---AG
i Mesoplodon_bidens.MesBid_scaffold_183284              I 1 C 0
s Microcebus_murinus.CM007691.1                          16508049 28 +  47401472 TTC-ACAATACTG--------TCTTG-TCAGCACAA---AC
i Microcebus_murinus.CM007691.1                         I 1 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  29318 28 -     48017 TCC-AAGATACTG--------TGCTG-TCAGCAAAA---AG
i Microgale_talazaci.MicTal_scaffold_34660              I 1 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               21017 28 -     32043 CCC-AAAGTACTG--------TCCTG-TCAGCACAA---AG
i Micronycteris_hirsuta.MicHir_scaffold_37978           I 1 C 0
s Microtus_ochrogaster.CM001673.1                        22817768 28 -  98408828 TAT-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Microtus_ochrogaster.CM001673.1                       I 1 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8207777 27 +  10048721 C-C-CAAATACTG--------TCCTG-TCAGCGCGA---AG
i Miniopterus_natalensis.LDJU01000022.1                 I 1 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            32448 27 +     45743 C-C-CAAATACTG--------TCCTG-TCAGCGCGA---AG
i Miniopterus_schreibersii.MinSch_scaffold_24116        I 1 C 0
s Miopithecus_ogouensis.k141_2666161                        33346 28 +     34273 TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Miopithecus_ogouensis.k141_2666161                    I 1 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         9000 28 -    104932 CCC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Mirounga_angustirostris.MirAng_flattened_line_8852    I 1 C 0
s Mirza_zaza.k141_226143                                     3454 28 +      8497 TTC-ACAATACTG--------TCTTG-TCAGCACAA---AG
i Mirza_zaza.k141_226143                                I 1 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 144757 28 +    154973 TTC-AAGATACTG--------TCCAG-TCAGCAAAA---AG
i Monodon_monoceros.MonMon_M_scaffold_5598              I 1 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                159527 28 +    265003 CCC-AAAATACTG--------TCCTG-TCAGCGCGA---AG
i Mormoops_blainvillei.MorMeg_scaffold_2952             I 1 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 2939 28 -      4346 CCC-AAGATACTG--------TCCTG-TCAGCACAA---AG
i Moschus_moschiferus.MosMos_scaffold_146101            I 1 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  142620 28 -    168139 CCC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Mungos_mungo.MunMun_flattened_line_8729               I 1 C 0
s Murina_feae.MurFea_scaffold_2254                          17421 25 -    100666 C-T-CAAA-ACTG--------T-CTA-TCAGCACCA---AA
i Murina_feae.MurFea_scaffold_2254                      I 1 C 0
s Mus_caroli.LT608236.1                                  70764281 28 +  92629107 TAT-AAGAGACTG--------TCTTG-TCAGCACAA---TG
i Mus_caroli.LT608236.1                                 I 1 C 0
s Mus_musculus.chr16                                     75487318 28 +  98207768 TAT-AAGAGACTG--------TCTTG-TCAGCACAA---TG
i Mus_musculus.chr16                                    I 1 C 0
s Mus_pahari.LT608305.1                                  67553489 28 +  89017189 TAT-AAGAGACTG--------TCTTG-TCAGCACAG---TG
i Mus_pahari.LT608305.1                                 I 1 C 0
s Mus_spretus.CM004110.1                                 74328499 28 +  97876770 CAT-AAGAGACTG--------TCTTG-TCAGCACAA---TG
i Mus_spretus.CM004110.1                                I 1 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              9042 28 +     98495 GCC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 1 C 0
s Mustela_putorius.JH417978.1                             4421865 28 -  28371801 CCC-AAGATACTG--------TCTTG-TCAGcacaa---ag
i Mustela_putorius.JH417978.1                           I 1 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     87994 29 -    117718 TCC-AAGATGCTG--------TCTCGGACAGCACAA---AG
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 1 C 0
s Myotis_brandtii.KE161952.1                               965741 26 +   8389877 C-T-CAAA-ACTG--------TCCTA-TCAGCACCA---AA
i Myotis_brandtii.KE161952.1                            I 1 C 0
s Myotis_davidii.KB114863.1                               5017432 26 +   6462685 C-T-CAAA-ACTG--------TCCTA-TCAGCACCA---AA
i Myotis_davidii.KB114863.1                             I 1 C 0
s Myotis_lucifugus.GL429887.1                             3463328 26 -   3747815 C-T-CAAA-ACTG--------TCCTA-TCAGCACCA---AA
i Myotis_lucifugus.GL429887.1                           I 1 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         8523 26 +     66751 C-T-CAAA-CCTG--------TCCTA-TCAGCACCA---AA
i Myotis_myotis.MyoMyo_scaffold_6123                    I 1 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3399 28 -      8794 TCC-AAGATACTG--------TCCTG-TCAGCACAA---AG
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        I 1 C 0
s Nannospalax_galili.KL201303.1                            108377 28 +    362372 TGT-AAGATACTG--------GCTTG-TCAGCACAA---AG
i Nannospalax_galili.KL201303.1                         I 1 C 0
s Nasalis_larvatus.k141_153429                               5725 28 +     48152 TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Nasalis_larvatus.k141_153429                          T 1254 I 1254
s Neomonachus_schauinslandi.NINY01007774.1                4482599 28 -  14209539 CCC-AAGATACTG--------TCTTG-TCAGcacaa---ag
i Neomonachus_schauinslandi.NINY01007774.1              I 1 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3949369 28 -   4490290 ttc-aagatACTG--------TCCAG-Tcagcaaaa---ag
i Neophocaena_asiaeorientalis.KZ688543.1                I 1 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  47643 28 +     94413 CCT-GAAATACTG--------TCCTG-TCAGCACAA---AG
i Noctilio_leporinus.NocLep_scaffold_12062              I 1 C 0
s Nomascus_annamensis.k141_302224                             435 28 +      1516 TTC-AAGATACTG--------TCTTA-TCAGCACAA---AG
i Nomascus_annamensis.k141_302224                       C 0 C 0
s Nomascus_concolor.k141_49591                                820 28 +      2014 TTC-AAGATACTG--------GCTTG-TCAGCACAA---AG
i Nomascus_concolor.k141_49591                          T 736 I 736
s Nomascus_gabriellae.k141_906566                            2148 28 -      2544 TTC-AAGATACTG--------GCTTG-TCAGCACAG---AG
i Nomascus_gabriellae.k141_906566                       I 5 C 0
s Nomascus_siki_b.tarseq_80                             22624 28 -  18771707 TTC-AAGATACTG--------GCTTG-TCAGCACAA---AG
i Nomascus_siki_b.tarseq_80                         T 772 I 772
s Nomascus_siki_a.k141_595747                                  1109 28 +      4512 TTC-AAGATACTG--------TCTTA-TCAGCACAA---AG
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                28049 28 +   3668941 CCC-AAGATACTG--------TCTTG-TCAGcacaa---ag
i Nyctereutes_procyonoides.CAJHUB010000786.1            I 1 C 0
s Nycticebus_bengalensis.LG16                            65564890 28 -  95554990 CTC-ACAATACCA--------TCCTG-TCAGCACAA---AG
i Nycticebus_bengalensis.LG16                           I 1 C 0
s Nycticebus_coucang.k141_2051882                            1735 28 +      6470 CTC-ACAATACCA--------TCCTG-TCAGCACAA---AG
i Nycticebus_coucang.k141_2051882                       I 1 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65667260 28 +  89412551 CTC-ACAATACCA--------TCCTG-TCAGCACAA---AG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     I 1 C 0
s Ochotona_princeps.JH802095.1                            4993878 28 -  23139505 CGC-AAGATACTG--------CCTTG-TCAGCACTA---AG
i Ochotona_princeps.JH802095.1                          I 1 C 0
s Octodon_degus.JH651621.1                                3683466 29 +  10294119 TCC-AAGATGCTG--------TCTGAGAcagcacaa---ag
i Octodon_degus.JH651621.1                              I 1 C 0
s Odobenus_rosmarus.KB229369.1                             677255 28 -   3126709 CCC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Odobenus_rosmarus.KB229369.1                          I 1 C 0
s Odocoileus_virginianus.KZ101650.1                       1078067 28 +   1425656 CCC-AAGATACTG--------TCCCG-TCAGcacaa---ag
i Odocoileus_virginianus.KZ101650.1                     I 1 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         35222 28 +     78940 CCC-AAGATACTG--------TCCTG-TCAGCACAA---AG
i Okapia_johnstoni.LVCL01S0017931.1                     I 1 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  123042 28 +    145789 TAT-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Ondatra_zibethicus.OndZib_scaffold_6821               I 1 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  34798 28 +     62360 TAT-AAGATACTG--------TCTTG-TCAGCATAA---AG
i Onychomys_torridus.OnyTor_scaffold_12578              I 1 C 0
s Orcinus_orca.KB316965.1                                 7223053 28 -   7562323 ttc-aagatACTG--------TCCAG-Tcagcaaaa---ag
i Orcinus_orca.KB316965.1                               I 1 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              41438 28 -     66828 TCC-AAGATATTG--------TCCTG-TCAGCACGA---AG
i Orycteropus_afer.OryAfe_flattened_line_13509          I 1 C 0
s Oryctolagus_cuniculus.CM000803.1                      141873563 28 + 163896628 TCC-GAGATACTG--------TCTTG-TCAGCACAA---AG
i Oryctolagus_cuniculus.CM000803.1                      I 1 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      305388 28 -    505867 CCC-AAGATACTG--------TCTTG-TCAGcacaa---ag
i Otocyon_megalotis.JAEUCK010005121.1                   I 1 C 0
s Otolemur_crassicaudatus.k141_321880                       36881 28 +     38679 CTC-CCAATACTG--------TCATG-TCAGCACAA---AG
i Otolemur_crassicaudatus.k141_321880                   I 1 C 0
s Otolemur_garnettii.GL873528.1                          18006323 28 -  38779656 CTC-CCGATACTG--------TCATG-TCAGCAcaa---ag
i Otolemur_garnettii.GL873528.1                         I 1 C 0
s Ovis_aries.CM001582.2                                 134075644 28 - 275406953 CCC-AAGATACTG--------TCCTG-TCAGcacaa---ag
i Ovis_aries.CM001582.2                                 I 1 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      76858 28 +    140051 CCC-AAGATACTG--------TCCTG-TCAGCACAA---AG
i Ovis_canadensis.OviCan_scaffold_6251                  I 1 C 0
s Pan_paniscus.CM003386.1                               127572376 28 - 205426864 TTC-AGGATACTG--------TCTTG-TCAGCACAA---AG
i Pan_paniscus.CM003386.1                               T 742 I 742
s Pan_troglodytes.KZ622857.1                               326100 28 +    772158 TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Pan_troglodytes.KZ622857.1                            I 124 I 234
s Panthera_onca.PanOnc_flattened_line_1615                  32083 28 +    295523 CCC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Panthera_onca.PanOnc_flattened_line_1615              I 1 C 0
s Panthera_pardus.KV860323.1                              3635816 28 +  18214204 CCC-AAGATACTG--------TCTTG-TCagcacaa---ag
i Panthera_pardus.KV860323.1                            I 1 C 0
s Panthera_tigris.KE721879.1                              5025464 28 -   6340057 CCC-AAGATACTG--------TCTTG-TCagcacaa---ag
i Panthera_tigris.KE721879.1                            I 1 C 0
s Pantholops_hodgsonii.KE114631.1                         1064505 28 -   1292953 CCC-AAGATACTG--------CCCTG-TCAGCACAA---AG
i Pantholops_hodgsonii.KE114631.1                       I 1 C 0
s Papio_anubis.CM001492.2                               188153471 28 - 188283584 TTT-GAGATACTG--------TCTTG-TCAGCACAA---GG
i Papio_anubis.CM001492.2                               T 1243 I 1243
s Papio_cynocephalus.k141_883042                             3032 28 +      5367 TTT-GAGATACTG--------TCTCG-TCAGCACAA---AG
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47510868 28 +  47705337 TTT-GAGATACTG--------TCTTG-TCAGCACAA---GG
i Papio_hamadryas.Contig15                              T 1235 I 1235
s Papio_kindae.k141_5458022                                 64845 28 -    104429 TTT-GAGATACTG--------TCTTG-TCAGCACAA---GG
i Papio_kindae.k141_5458022                             T 1236 I 1236
s Papio_papio.k141_979496                                    4613 28 +     14967 TTT-GAGATACTG--------TCTCG-TCAGCACAA---AG
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_3762866                                35039 28 +     35859 TTT-GAGATACTG--------TCTTG-TCAGCACAA---GG
i Papio_ursinus.k141_3762866                            I 1 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113383 28 -    135482 CCC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 I 1 C 0
s Perodicticus_ibeanus.k141_117958                           2934 28 -     23713 CTC-ACAATACTG--------TCATG-TCAGCACAA---AG
i Perodicticus_ibeanus.k141_117958                      I 1 C 0
s Perodicticus_potto.k141_713187                            22233 28 -     27972 CTC-ACAATACTG--------TCATG-TCAGCACAA---AG
i Perodicticus_potto.k141_713187                        I 1 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      40850 28 -     45160 TTT-AAGATACTG--------TCTTG-TAAGCACAA---AG
i Perognathus_longimembris.PerPac_flattened_line_22291  I 1 C 0
s Peromyscus_maniculatus.KI615518.1                       4947974 28 -   8017169 TAT-AAGATACTG--------TCTTG-TCAGCATAA---AG
i Peromyscus_maniculatus.KI615518.1                     I 1 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    10155 28 -     36578 TCT-GAGATGCTG--------TCTTG-TCAGCACAA---AG
i Petromus_typicus.PetTyp_scaffold_33007                I 1 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            119670 28 -    122454 TTC-AAGATACTG--------TCCAG-TCAGCAAAA---AG
i Phocoena_phocoena.PhoPho_flattened_line_11948         I 1 C 0
s Piliocolobus_badius.k141_1497351                           2729 28 -      3310 TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Piliocolobus_badius.k141_1497351                      I 1 C 0
s Piliocolobus_gordonorum.k141_902470                       22634 28 -     82327 TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Piliocolobus_gordonorum.k141_902470                   I 1 C 0
s Piliocolobus_kirkii.k141_557609                           19381 28 +     19957 TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Piliocolobus_kirkii.k141_557609                       I 5 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26737395 28 +  26888534 TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Piliocolobus_tephrosceles.PDMG02000036.1              T 1571 I 1571
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            95192 27 +    112873 C-T-CAAATACTG--------TCCTA-TCAGCACCA---AA
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        I 1 C 0
s Pithecia_albicans.k141_991845                             41377 28 -     61926 TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG
i Pithecia_albicans.k141_991845                         I 1 I 720
s Pithecia_chrysocephala.k141_159118                        22806 28 +     78826 TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG
i Pithecia_chrysocephala.k141_159118                    I 1 I 720
s Pithecia_hirsuta.k141_1152968                              6757 28 -     15800 TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG
i Pithecia_hirsuta.k141_1152968                         I 1 I 720
s Pithecia_mittermeieri.k141_2119203                         9955 28 -     16101 TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG
i Pithecia_mittermeieri.k141_2119203                    I 1 I 720
s Pithecia_pissinattii.k141_1102319                          3264 28 +      9673 TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG
i Pithecia_pissinattii.k141_1102319                     I 1 I 720
s Pithecia_pithecia.tarseq_313                           13472258 28 -  19735023 TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG
i Pithecia_pithecia.tarseq_313                          I 1 I 720
s Pithecia_vanzolinii.k141_831006                           11166 28 -     31692 TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG
i Pithecia_vanzolinii.k141_831006                       I 1 I 720
s Platanista_gangetica.PlaMin_flattened_line_72990           3738 28 +     21690 TTC-AAGATACTG--------TCCTG-TCAGCAAAA---AG
i Platanista_gangetica.PlaMin_flattened_line_72990      I 1 C 0
s Plecturocebus_bernhardi.k141_959214                       20598 28 +     44506 TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG
i Plecturocebus_bernhardi.k141_959214                   I 1 I 722
s Plecturocebus_brunneus.k141_498086                        20808 28 +     67491 TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG
i Plecturocebus_brunneus.k141_498086                    I 1 I 722
s Plecturocebus_caligatus.k141_2539816                      11049 28 -     98129 TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG
i Plecturocebus_caligatus.k141_2539816                  I 1 I 722
s Plecturocebus_cinerascens.k141_744510                     20654 28 +    147771 TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG
i Plecturocebus_cinerascens.k141_744510                 I 1 I 722
s Plecturocebus_cupreus.k141_1223294                        20904 28 -     23762 TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG
i Plecturocebus_cupreus.k141_1223294                    I 1 I 721
s Plecturocebus_dubius.k141_3565563                          1370 28 -     55515 TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG
i Plecturocebus_dubius.k141_3565563                     I 1 I 722
s Plecturocebus_grovesi.k141_242819                         20723 28 +    152463 TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG
i Plecturocebus_grovesi.k141_242819                     I 1 I 722
s Plecturocebus_hoffmannsi.k141_1595076                      7483 28 +      8943 TTC-AAGATACTG--------TCTTG-TCAGTACAA---AT
i Plecturocebus_hoffmannsi.k141_1595076                 I 1 I 722
s Plecturocebus_miltoni.k141_841561                         10443 28 +    134592 TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG
i Plecturocebus_miltoni.k141_841561                     I 1 I 722
s Plecturocebus_moloch.k141_890597                          21033 28 -     75465 TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG
i Plecturocebus_moloch.k141_890597                      I 1 I 722
s Pongo_abelii.NDHI03003816.1                              185660 28 -    373494 TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19806308 28 +  19899266 TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               2963 28 -     15069 TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Presbytis_comata.k141_672698                          T 1260 I 1260
s Presbytis_mitrata.k141_860013                              3097 28 +     14865 TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Presbytis_mitrata.k141_860013                         T 1260 I 1260
s Procavia_capensis.ProCapCap_scaffold_15315                74269 28 +     78963 TCC-AAGATACTG--------CTCTC-TCAGCACAA---AC
i Procavia_capensis.ProCapCap_scaffold_15315            I 1 C 0
s Prolemur_simus.MPIZ01000048.1                           6846305 28 +  12164890 TTC-ACAATACTG--------TCTTG-TCAGCACAA---AG
i Prolemur_simus.MPIZ01000048.1                         I 1 C 0
s Propithecus_coquerelli.NW_012147997.1                    664922 28 -   2312742 NNN-NNNNNNNNN--------NNNNN-NNNNNNNNN---NN
i Propithecus_coquerelli.NW_012147997.1                 I 1 C 0
s Propithecus_coronatus.k141_1353159                         1449 28 +     11805 TTC-ACAATACTG--------TCTTG-TCAGCACAA---AG
i Propithecus_coronatus.k141_1353159                    I 1 C 0
s Propithecus_diadema.k141_577245                           40783 28 +     52369 TTC-ACAATACTG--------TCTTG-TCAGCACAA---AG
i Propithecus_diadema.k141_577245                       I 1 C 0
s Propithecus_edwardsi.k141_1317105                         33172 28 -     44753 TTC-ACAATACTG--------TATTG-TCAGCACAA---AG
i Propithecus_edwardsi.k141_1317105                     I 1 C 0
s Propithecus_perrieri.k141_7554                            15093 28 +     27322 TTC-ACAATACTG--------TCTTG-TCAGCACAA---AG
i Propithecus_perrieri.k141_7554                        I 1 C 0
s Propithecus_tattersalli.k141_907138                       14732 28 -     53241 TTC-ACAATACTG--------TCTTG-TCAGCACAA---AG
i Propithecus_tattersalli.k141_907138                   I 1 C 0
s Propithecus_verreauxi.k141_158021                         37004 28 -     48185 TTC-ACAATACTG--------TCTTG-TCAGCACAA---AG
i Propithecus_verreauxi.k141_158021                     I 1 C 0
s Psammomys_obesus.NESX01026517.1                           31406 28 +     77221 TCT-AAGATACTG--------CCTTG-TCAGCACAG---CA
i Psammomys_obesus.NESX01026517.1                       I 1 C 0
s Pteronotus_parnellii.KE867983.1                            2198 27 -     27784 CCC-AAAATACTG--------TCCTG-TCAGCAC-A---AG
i Pteronotus_parnellii.KE867983.1                       I 1 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        243958 28 -    344369 CCC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Pteronura_brasiliensis.PteBra_flattened_line_1343     I 1 C 0
s Pteropus_alecto.KB031157.1                             13244321 28 -  17261082 CCC-TAGATACTG--------TCCCA-TCAGcacaa---ag
i Pteropus_alecto.KB031157.1                            I 1 C 0
s Pteropus_vampyrus.KN525959.1                             602272 28 -   3946241 CCC-TAGATACTG--------TCCCG-TCAGcacaa---ag
i Pteropus_vampyrus.KN525959.1                          I 1 C 0
s Puma_concolor.QAVW01000427.1                          131532046 28 - 161321710 CCC-AAGATACTG--------TCTTG-TCagcacaa---ag
i Puma_concolor.QAVW01000427.1                          I 1 C 0
s Pygathrix_cinerea.k141_374971                             27092 28 +     56732 TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Pygathrix_cinerea.k141_374971                         T 1254 I 1254
s Pygathrix_nigripes_b.ctg79                                 6803583 28 +   6970761 TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Pygathrix_nigripes_b.ctg79                               T 1254 I 1254
s Pygathrix_nigripes_a.k141_101123                             2976 28 +     18040 TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Pygathrix_nigripes_a.k141_101123                        T 1255 I 1255
s Rangifer_tarandus.RanTarSib_scaffold_24239                14145 28 +     68503 CCC-AAGATACTG--------TCCCA-TCAGCACAA---AG
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 1 C 0
s Rattus_norvegicus.chr11                                13913382 18 +  90463843 -----------TG--------TCTTG-TCAGCACAG---TG
i Rattus_norvegicus.chr11                               I 1 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1786142 28 +   2252614 CCC-AAGATACTG--------TCTTG-TCAGCATAA---CG
i Rhinolophus_sinicus.LVEH01000179.1                    I 1 C 0
s Rhinopithecus_bieti.k119_102124                           13529 28 -     14454 TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Rhinopithecus_bieti.k119_102124                       I 1 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206374855 28 - 206558726 TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Rhinopithecus_roxellana.NC_044549.1                   T 1256 I 1256
s Rhinopithecus_strykeri.ctg4                            44852503 28 -  45163003 TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Rhinopithecus_strykeri.ctg4                           T 2508 I 2508
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                17614 28 +    109198 CCC-TAGATACTG--------TCCCA-TCAGCACAA---AG
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            I 1 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       5950 28 +     12214 CCC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Saiga_tatarica.SaiTat_scaffold_82192                  I 1 C 0
s Saimiri_boliviensis.NW_024100938.1                     15670493 28 -  43202129 TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG
i Saimiri_boliviensis.NW_024100938.1                    I 1 I 702
s Saimiri_cassiquiarensis.k141_808270                        2359 28 +     34089 TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG
i Saimiri_cassiquiarensis.k141_808270                   I 1 I 753
s Saimiri_macrodon.k141_2087127                              2300 28 -     60842 TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG
i Saimiri_macrodon.k141_2087127                         I 1 I 753
s Saimiri_oerstedii.k141_841116                              2395 28 +     67014 TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG
i Saimiri_oerstedii.k141_841116                         I 1 I 753
s Saimiri_sciureus.k141_1947592                              2373 28 +     60816 TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG
i Saimiri_sciureus.k141_1947592                         I 1 I 753
s Saimiri_ustus.k141_1282476                                 2310 28 -     76454 TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG
i Saimiri_ustus.k141_1282476                            I 1 I 753
s Sapajus_apella.ctg10                                   17339044 28 -  30362882 TTC-AAGATACTG--------TCTTG-TCAGTACAA---AG
i Sapajus_apella.ctg10                                  T 723 I 723
s Sapajus_macrocephalus.k141_966464                         18419 28 -     62485 TTC-AAGAGACTG--------TCTTG-TCAGTACAA---AG
i Sapajus_macrocephalus.k141_966464                     T 723 I 723
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   29704 28 -    114521 CCC-AAGATACTG--------TCCTG-TCAGCACAA---AG
i Scalopus_aquaticus.ScaAqu_scaffold_9300               I 1 C 0
s Semnopithecus_entellus.k141_1527475                       25517 28 +     26421 TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Semnopithecus_entellus.k141_1527475                   I 1 C 0
s Semnopithecus_hypoleucos.k141_761524                       5977 28 +     20762 TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Semnopithecus_hypoleucos.k141_761524                  T 1258 I 1258
s Semnopithecus_johnii.k141_1351450                         39712 28 +     40653 TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Semnopithecus_johnii.k141_1351450                     I 1 C 0
s Semnopithecus_priam.k141_198153                           10269 28 -     12194 TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Semnopithecus_priam.k141_198153                       I 61 C 0
s Semnopithecus_schistaceus.k141_653647                     23691 28 -     27512 TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Semnopithecus_schistaceus.k141_653647                 I 61 C 0
s Semnopithecus_vetulus.k141_642050                         32710 28 -     33692 TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Semnopithecus_vetulus.k141_642050                     I 1 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   97595 28 -    120886 TGT-AAGATGCTG--------TCTTG-TCAGCACAA---AG
i Sigmodon_hispidus.SigHis_scaffold_11332               I 1 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            16343 28 +    739146 CCC-AAGATACTG--------TTCTG-TCAGCACAA---AG
i Solenodon_paradoxus.SolPar_flattened_line_1012        I 1 C 0
s Sorex_araneus.JH798170.1                               17748554 31 -  27805282 CCC-AAGATACTG--------CCCTG-TCagcacaaaaaag
i Sorex_araneus.JH798170.1                              I 1 C 0
s Spermophilus_dauricus.KZ294190.1                        2237833 28 +   2842873 TCC-AAGAGACTG--------TCTTG-TCAGcacaa---ag
i Spermophilus_dauricus.KZ294190.1                      I 1 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             232718 28 -    276980 CCC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Spilogale_gracilis.SpiGra_flattened_line_905          I 1 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            25286 28 +     62062 CCC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Suricata_suricatta.SurSur_flattened_line_20339        I 1 C 0
s Sus_scrofa.CM000824.4                                 189270195 28 + 218635234 CTC-AAGATACTG--------TCTTG-TCAgcacaa---ag
i Sus_scrofa.CM000824.4                                 I 1 C 0
s Symphalangus_syndactylus.tarseq_24                     13899984 28 +  13920577 TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Symphalangus_syndactylus.tarseq_24                    I 5 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               4141 28 -      6213 CCC-CAAATACTG--------TCCTG-TCAGCACCA---AG
i Tadarida_brasiliensis.TadBra_scaffold_145589          I 1 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               13073 28 +     45698 TCC-GAGATACTG--------TCCTG-TCAGCACAA---AG
i Tamandua_tetradactyla.TamTet_scaffold_26877           I 1 C 0
s Tapirus_indicus.TapInd_scaffold_176                      805062 28 +   1148477 CCC-AAGATACTG--------TCGCG-TCAGCACCA---AG
i Tapirus_indicus.TapInd_scaffold_176                   I 1 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  55723 28 +     99546 CCC-AAGATACTG--------TCGCG-TCAGCACCA---AG
i Tapirus_terrestris.TapTer_scaffold_14939              I 1 C 0
s Tarsius_lariang.k141_609102                               24377 28 +     42269 TTC-AAGGCAGTG--------TCTTG-CCAGCACAA---GG
i Tarsius_lariang.k141_609102                           I 1 C 0
s Tarsius_wallacei.k141_48636                               57693 28 +     65473 TTC-AAGGCAGTG--------TCTTG-CCAGCACAA---GG
i Tarsius_wallacei.k141_48636                           I 1 C 0
s Theropithecus_gelada.CM009951.1                       194005007 28 - 194193292 TTT-GAGATACTG--------TCTTG-TCAGCACAA---GG
i Theropithecus_gelada.CM009951.1                       T 1235 I 1235
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             37212 28 -     47444 TCC-AAGATGCTG--------TCTTG-TCAGCACAA---GG
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         I 1 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  1957 28 +      6782 TCT-AAGATACTG--------TCCTG-TCAGCAAAA---AG
i Tolypeutes_matacus.TolMat_scaffold_269431             I 1 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  134208 28 -    259118 CCC-AAAATACCG--------TCCTG-TCAGCACAA---AG
i Tonatia_saurophila.TonSau_scaffold_3334               I 1 C 0
s Trachypithecus_auratus.k141_738098                        24087 28 +     38948 TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Trachypithecus_auratus.k141_738098                    T 1258 I 1258
s Trachypithecus_crepusculus.k141_1588528                   17814 28 -     32910 TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Trachypithecus_crepusculus.k141_1588528               T 1258 I 1258
s Trachypithecus_cristatus.k141_27198                       23712 28 +     24652 TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Trachypithecus_cristatus.k141_27198                   I 1 C 0
s Trachypithecus_francoisi.k141_1178450                      2590 28 -      3559 TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Trachypithecus_francoisi.k141_1178450                 I 1 C 0
s Trachypithecus_geei.k141_670367                           40536 28 -     54611 TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Trachypithecus_geei.k141_670367                       T 1256 I 1256
s Trachypithecus_germaini.k141_809503                       16535 28 +     17312 TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Trachypithecus_germaini.k141_809503                   I 61 C 0
s Trachypithecus_hatinhensis.k141_357672                    23898 28 -     25040 TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Trachypithecus_hatinhensis.k141_357672                I 61 C 0
s Trachypithecus_laotum.k141_171445                          2559 28 +      3528 TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Trachypithecus_laotum.k141_171445                     I 61 C 0
s Trachypithecus_leucocephalus.k141_283605                  48926 28 +     51589 TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Trachypithecus_leucocephalus.k141_283605              T 1258 I 1258
s Trachypithecus_melamera.k141_238507                       12102 28 +     14732 TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Trachypithecus_melamera.k141_238507                   T 1258 I 1258
s Trachypithecus_obscurus.k141_1115109                       2579 28 -     28054 TTC-AAGATACTG--------TCTTG-CCAGCACAA---AG
i Trachypithecus_obscurus.k141_1115109                  T 1258 I 1258
s Trachypithecus_phayrei.ctg3                            44657374 28 -  44834318 TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Trachypithecus_phayrei.ctg3                           T 1258 I 1258
s Trachypithecus_pileatus.k141_469329                        2384 28 +      3372 TTC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Trachypithecus_pileatus.k141_469329                   I 1 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   3551 28 +     90398 CCC-AAGACACTG--------TCCTG-TCAGCACAA---AG
i Tragulus_javanicus.TraJav_scaffold_14717              I 1 C 0
s Trichechus_manatus.JH594618.1                          16079646 28 +  31416278 TCC-AAGATACTG--------TCCTG-TCAGCACAA---AG
i Trichechus_manatus.JH594618.1                         I 1 C 0
s Tupaia_chinensis.KB320831.1                             2790050 28 -   3938065 tcc-aaaataCTG--------TCTTG-TCAGCACAA---AG
i Tupaia_chinensis.KB320831.1                           I 1 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    2570 28 +     13056 TCC-AAAATACTG--------TCTTG-TCAGCACAA---AG
i Tupaia_tana.TupTan_flattened_line_68454               I 1 C 0
s Tursiops_truncatus.MRVK01000923.1                      69311772 28 -  96451834 ttc-aagatACTG--------TCCAG-Tcagcaaaa---ag
i Tursiops_truncatus.MRVK01000923.1                     I 1 C 0
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 24892 28 -     25548 CCC-AAGATACTG--------TCCTG-TCAGCACAA---AG
i Uropsilus_gracilis.UroGra_scaffold_4143_0             I 1 C 0
s Ursus_maritimus.KK498671.1                              6512510 28 +  28682327 CCC-AAGATACTG--------TCTTG-TCAGcacaa---ag
i Ursus_maritimus.KK498671.1                            I 1 C 0
s Varecia_rubra.k141_432109                                  3146 28 -     20643 TTC-ACAATACTG--------TCTTG-TCAGCACAA---AG
i Varecia_rubra.k141_432109                             I 1 C 0
s Varecia_variegata.k141_775891                             22690 28 -     33872 TTC-ACAATACTG--------TCTTG-TCAGCACAA---AG
i Varecia_variegata.k141_775891                         I 1 C 0
s Vicugna_pacos.KN269600.1                                1523004 28 -   2331223 CGC-AAGATACTG--------TCCTG-TCAgcacaa---ag
i Vicugna_pacos.KN269600.1                              I 1 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                135456 28 -    281493 CCC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Vulpes_lagopus.VulLag_flattened_line_2045             I 1 C 0
s Xerus_inauris.XerIna_scaffold_7898                       124931 28 -    134049 TCC-AAGAGACTG--------TCTTG-TCAGCACAA---AG
i Xerus_inauris.XerIna_scaffold_7898                    I 1 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        211985 28 -    227762 CCC-AAGATACTG--------TCTTG-TCAGCACAA---AG
i Zalophus_californianus.ZalCal_flattened_line_4097     I 1 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     13168 28 -     20485 TCT-GAGATACTG--------TCTTG-TCAGCACAA---AG
i Zapus_hudsonius.ZapHud_scaffold_64392                 I 1 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           5268 28 -      8775 TTC-AAGATACTG--------TCCTG-TCAGCAAAA---AG
i Ziphius_cavirostris.ZipCav_flattened_line_127025      I 1 C 0
e Echinops_telfairi.JH980316.1                           22994071  0 -  44670279 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               10403 1 +    209709 A
s Allenopithecus_nigroviridis.k141_3103728                   1005 1 +      1665 A
i Allenopithecus_nigroviridis.k141_3103728              I 28 I 5
s Allochrocebus_lhoesti.k141_3566948                          491 1 -     29318 A
i Allochrocebus_lhoesti.k141_3566948                    I 28 I 5
s Allochrocebus_preussi.k141_21674                            708 1 -      1421 A
i Allochrocebus_preussi.k141_21674                      I 28 I 5
s Allochrocebus_solatus.k141_371672                           385 1 -     80423 A
i Allochrocebus_solatus.k141_371672                     I 28 I 5
s Alouatta_belzebul.k141_1818029                             8669 1 -     18050 A
i Alouatta_belzebul.k141_1818029                        I 713 T 714
s Alouatta_caraya.k141_5460                                  9782 1 -     11521 A
i Alouatta_caraya.k141_5460                             I 713 T 714
s Alouatta_discolor.k141_811576                              9346 1 -     21359 A
i Alouatta_discolor.k141_811576                         I 713 T 714
s Alouatta_juara.k141_298055                                  637 1 +      1823 A
i Alouatta_juara.k141_298055                            I 28 I 5
s Alouatta_macconnelli.k141_1331706                          8637 1 -     10438 A
i Alouatta_macconnelli.k141_1331706                     I 713 T 714
s Alouatta_nigerrima.k141_2718643                            5293 1 +      7047 A
i Alouatta_nigerrima.k141_2718643                       I 713 T 714
s Alouatta_palliata.k141_1316127                             8578 1 +     10410 A
i Alouatta_palliata.k141_1316127                        I 712 T 713
s Alouatta_puruensis.k141_1284840                            2382 1 -      4927 A
i Alouatta_puruensis.k141_1284840                       I 713 T 714
s Alouatta_seniculus.k141_990213                             5312 1 +      6429 A
i Alouatta_seniculus.k141_990213                        I 713 T 714
s Aotus_azarae.k141_3170768                                 61036 1 +     78111 A
i Aotus_azarae.k141_3170768                             I 717 T 718
s Aotus_griseimembra.k141_3275623                            3977 1 +     22701 A
i Aotus_griseimembra.k141_3275623                       I 720 T 721
s Aotus_nancymaae.KZ196176.1                              5747934 1 +   9889416 A
i Aotus_nancymaae.KZ196176.1                            I 719 T 720
s Aotus_trivirgatus.k141_1740727                             4519 1 -    104377 A
i Aotus_trivirgatus.k141_1740727                        I 719 T 720
s Aotus_vociferans.k141_718647                               4525 1 +     23246 A
i Aotus_vociferans.k141_718647                          I 719 T 720
s Ateles_geoffroyi_b.tarseq_2582                             9537769 1 +  39197703 A
i Ateles_geoffroyi_b.tarseq_2582                           I 701 T 702
s Ateles_belzebuth.k141_1348307                             59053 1 +     85812 A
i Ateles_belzebuth.k141_1348307                         I 701 T 702
s Ateles_chamek.k141_1072810                                10052 1 +     89302 A
i Ateles_chamek.k141_1072810                            I 701 T 702
s Ateles_geoffroyi_a.k141_1300742                             14557 1 -     58268 A
i Ateles_geoffroyi_a.k141_1300742                         I 701 T 702
s Ateles_marginatus.k141_899112                             62548 1 +    119057 A
i Ateles_marginatus.k141_899112                         I 701 T 702
s Ateles_paniscus.k141_1631200                               4517 1 -     25888 A
i Ateles_paniscus.k141_1631200                          I 719 T 720
s Cacajao_ayresi.k141_724503                               112411 1 -    171031 A
i Cacajao_ayresi.k141_724503                            I 720 T 721
s Cacajao_calvus.k141_96166                                 11437 1 +    125063 A
i Cacajao_calvus.k141_96166                             I 720 T 721
s Cacajao_hosomi.k141_303789                                13485 1 -    216513 A
i Cacajao_hosomi.k141_303789                            I 720 T 721
s Cacajao_melanocephalus.k141_1160263                        6025 1 -    134917 A
i Cacajao_melanocephalus.k141_1160263                   I 720 T 721
s Cebus_albifrons.Contig22                               18889268 1 -  29618158 A
i Cebus_albifrons.Contig22                              I 724 T 725
s Cebus_olivaceus.k141_93739                                 6812 1 -     26817 A
i Cebus_olivaceus.k141_93739                            I 724 T 725
s Cebus_unicolor.k141_239009                                11052 1 +     25043 A
i Cebus_unicolor.k141_239009                            I 724 T 725
s Cercocebus_atys.KQ010443.1                              6553704 1 +   6739814 A
i Cercocebus_atys.KQ010443.1                            I 1237 T 1238
s Cercocebus_chrysogaster.k141_2328246                      25181 1 +     60454 A
i Cercocebus_chrysogaster.k141_2328246                  I 28 I 5
s Cercocebus_lunulatus.k141_4634644                           386 1 -     21101 A
i Cercocebus_lunulatus.k141_4634644                     I 28 I 5
s Cercocebus_torquatus.k141_3969582                         57696 1 -    107033 A
i Cercocebus_torquatus.k141_3969582                     I 1237 T 1238
s Cercopithecus_ascanius.k141_4123525                         590 1 -     17608 A
i Cercopithecus_ascanius.k141_4123525                   C 0 I 5
s Cercopithecus_cephus.k141_598190                          28088 1 +     30494 A
i Cercopithecus_cephus.k141_598190                      I 1251 T 1252
s Cercopithecus_diana.k141_2980617                          56931 1 -     59240 A
i Cercopithecus_diana.k141_2980617                      I 28 I 5
s Cercopithecus_hamlyni.k141_129805                           632 1 +     16677 A
i Cercopithecus_hamlyni.k141_129805                     I 28 I 5
s Cercopithecus_lowei.k141_623764                           22790 1 +     35983 A
i Cercopithecus_lowei.k141_623764                       I 1247 T 1248
s Cercopithecus_albogularis.ctg51                              11989321 1 +  12117833 A
i Cercopithecus_albogularis.ctg51                             I 1241 T 1242
s Cercopithecus_mona.ctg12                               46476076 1 +  46592721 A
i Cercopithecus_mona.ctg12                              I 1243 T 1244
s Cercopithecus_neglectus.k141_2078027                      39627 1 -     45581 A
i Cercopithecus_neglectus.k141_2078027                  I 28 I 5
s Cercopithecus_nictitans.k141_1129315                        636 1 +     35577 A
i Cercopithecus_nictitans.k141_1129315                  I 28 I 5
s Cercopithecus_petaurista.k141_64532                         409 1 -     25661 A
i Cercopithecus_petaurista.k141_64532                   I 28 I 5
s Cercopithecus_pogonias.k141_3109732                         387 1 -     17744 A
i Cercopithecus_pogonias.k141_3109732                   I 28 I 5
s Cercopithecus_roloway.k141_2263608                        19996 1 +     37128 A
i Cercopithecus_roloway.k141_2263608                    I 28 I 5
s Cheracebus_lucifer.k141_619653                             4060 1 -     18223 A
i Cheracebus_lucifer.k141_619653                        I 699 T 700
s Cheracebus_lugens.k141_203936                             21083 1 +     25473 A
i Cheracebus_lugens.k141_203936                         I 699 T 700
s Cheracebus_regulus.k141_2128895                           40122 1 +     57117 A
i Cheracebus_regulus.k141_2128895                       I 699 T 700
s Cheracebus_torquatus.k141_315545                          44797 1 +     54541 A
i Cheracebus_torquatus.k141_315545                      I 699 T 700
s Chiropotes_israelita.k141_1189915                         69620 1 +    196370 A
i Chiropotes_israelita.k141_1189915                     I 707 T 708
s Chiropotes_sagulatus.k141_773804                          13800 1 +     40510 A
i Chiropotes_sagulatus.k141_773804                      I 707 T 708
s Chlorocebus_aethiops.ctg22                             15137551 1 -  15256731 A
i Chlorocebus_aethiops.ctg22                            I 1257 T 1258
s Chlorocebus_pygerythrus.k141_1486215                      32598 1 -     53260 A
i Chlorocebus_pygerythrus.k141_1486215                  I 1258 T 1259
s Chlorocebus_sabaeus.CM001963.2                        101143161 1 + 101219884 A
i Chlorocebus_sabaeus.CM001963.2                        I 1372 T 1373
s Colobus_angolensis.KN985967.1                          10884924 1 +  10971483 A
i Colobus_angolensis.KN985967.1                         I 4556 T 4557
s Colobus_guereza.LG08                                  147663088 1 + 156195979 A
i Colobus_guereza.LG08                                  I 1562 T 1563
s Colobus_polykomos.k141_1406057                            15072 1 +     23629 A
i Colobus_polykomos.k141_1406057                        I 1559 T 1560
s Erythrocebus_patas.Contig8                             48769731 1 -  48907691 A
i Erythrocebus_patas.Contig8                            I 1259 T 1260
s Gorilla_beringei.k141_111300                               3803 1 -     14630 A
i Gorilla_beringei.k141_111300                          I 743 T 744
s Gorilla_gorilla.LT578340.1                            119650902 1 - 195582420 a
i Gorilla_gorilla.LT578340.1                            I 743 T 744
s Hoolock_leuconedys.ctg903                                     4921 1 -     61166 A
i Hoolock_leuconedys.ctg903                                I 859 I 5
s Lagothrix_lagothricha.k141_12968                          48638 1 -    147782 A
i Lagothrix_lagothricha.k141_12968                      I 716 T 717
s Lophocebus_aterrimus.ctg55                             19246793 1 +  19376315 A
i Lophocebus_aterrimus.ctg55                            C 0 T 1239
s Macaca_arctoides.k141_2201161                             18482 1 +     74745 A
i Macaca_arctoides.k141_2201161                         I 1241 T 1242
s Macaca_assamensis.Contig65                             12704999 1 +  12821369 A
i Macaca_assamensis.Contig65                            I 1252 T 1253
s Macaca_cyclopis.k119_893486                                 644 1 -      3136 A
i Macaca_cyclopis.k119_893486                           I 28 I 5
s Macaca_fascicularis.k141_155037                           45395 1 +     63263 A
i Macaca_fascicularis.k141_155037                       I 1250 T 1251
s Macaca_fuscata.k119_599327                                  161 1 -      2568 A
i Macaca_fuscata.k119_599327                            C 0 I 5
s Macaca_leonina.k141_467472                                  669 1 -      7381 A
i Macaca_leonina.k141_467472                            I 28 I 5
s Macaca_maura.k141_251854                                  43906 1 -     79256 A
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196034076 1 + 196197964 A
i Macaca_mulatta.NC_041755.1                            I 1252 T 1253
s Macaca_nemestrina.KQ004885.1                           11444181 1 +  11645122 A
i Macaca_nemestrina.KQ004885.1                          I 1251 T 1252
s Macaca_nigra.k141_282495                                   2853 1 -     46448 A
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                 525 1 -     13212 A
i Macaca_radiata.k141_3680256                           I 28 I 5
s Macaca_siberu.k141_741907                                 14267 1 -     55006 A
i Macaca_siberu.k141_741907                             I 1251 T 1252
s Macaca_silenus.Contig12                                43839304 1 +  43892939 A
i Macaca_silenus.Contig12                               I 1251 T 1252
s Macaca_thibetana.k99_662710                               15554 1 -     24607 A
i Macaca_thibetana.k99_662710                           I 28 I 5
s Macaca_tonkeana.k141_2870633                               2858 1 -     27140 A
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43435953 1 -  43563597 A
i Mandrillus_leucophaeus.scaffold125                    I 1238 T 1239
s Mandrillus_sphinx.Contig144                             4448779 1 -   4543643 A
i Mandrillus_sphinx.Contig144                           I 1238 T 1239
s Miopithecus_ogouensis.k141_2935907                          498 1 +     29742 A
i Miopithecus_ogouensis.k141_2935907                    I 28 I 5
s Nasalis_larvatus.k141_153429                               7007 1 +     48152 A
i Nasalis_larvatus.k141_153429                          I 1254 T 1255
s Nomascus_annamensis.k141_302224                             463 1 +      1516 A
i Nomascus_annamensis.k141_302224                       C 0 I 5
s Nomascus_concolor.k141_49591                               1584 1 +      2014 A
i Nomascus_concolor.k141_49591                          I 736 T 737
s Nomascus_gabriellae.k141_642452                             509 1 +      2851 A
i Nomascus_gabriellae.k141_642452                       I 28 I 5
s Nomascus_siki_b.tarseq_80                             23424 1 -  18771707 A
i Nomascus_siki_b.tarseq_80                         I 772 T 773
s Nomascus_siki_a.k141_595747                                  1137 1 +      4512 A
i Nomascus_siki_a.k141_595747                             C 0 T 737
s Pan_paniscus.CM003386.1                               127573146 1 - 205426864 A
i Pan_paniscus.CM003386.1                               I 742 T 743
s Pan_troglodytes.CM009241.2                            120150299 1 - 196562556 A
i Pan_troglodytes.CM009241.2                            I 28 T 743
s Papio_anubis.CM001492.2                               188154742 1 - 188283584 A
i Papio_anubis.CM001492.2                               I 1243 T 1244
s Papio_cynocephalus.k141_883042                             3060 1 +      5367 A
i Papio_cynocephalus.k141_883042                        C 0 I 5
s Papio_hamadryas.Contig15                               47512131 1 +  47705337 A
i Papio_hamadryas.Contig15                              I 1235 T 1236
s Papio_kindae.k141_5458022                                 66109 1 -    104429 A
i Papio_kindae.k141_5458022                             I 1236 T 1237
s Papio_papio.k141_979496                                    4641 1 +     14967 A
i Papio_papio.k141_979496                               C 0 I 5
s Papio_ursinus.k141_1345919                                  502 1 -      7628 A
i Papio_ursinus.k141_1345919                            I 28 I 5
s Piliocolobus_badius.k141_1987485                            530 1 -      5908 A
i Piliocolobus_badius.k141_1987485                      I 28 I 5
s Piliocolobus_gordonorum.k141_1270531                       1149 1 -     17985 A
i Piliocolobus_gordonorum.k141_1270531                  I 28 I 5
s Piliocolobus_kirkii.k141_929665                             516 1 +      7694 A
i Piliocolobus_kirkii.k141_929665                       I 28 I 5
s Piliocolobus_tephrosceles.PDMG02000036.1               26738994 1 +  26888534 A
i Piliocolobus_tephrosceles.PDMG02000036.1              I 1571 T 1572
s Pithecia_albicans.k141_991845                             42125 1 -     61926 A
i Pithecia_albicans.k141_991845                         I 720 T 721
s Pithecia_chrysocephala.k141_159118                        23554 1 +     78826 A
i Pithecia_chrysocephala.k141_159118                    I 720 T 721
s Pithecia_hirsuta.k141_1152968                              7505 1 -     15800 A
i Pithecia_hirsuta.k141_1152968                         I 720 T 721
s Pithecia_mittermeieri.k141_2119203                        10703 1 -     16101 A
i Pithecia_mittermeieri.k141_2119203                    I 720 T 721
s Pithecia_pissinattii.k141_1102319                          4012 1 +      9673 A
i Pithecia_pissinattii.k141_1102319                     I 720 T 721
s Pithecia_pithecia.tarseq_313                           13473006 1 -  19735023 A
i Pithecia_pithecia.tarseq_313                          I 720 T 721
s Pithecia_vanzolinii.k141_831006                           11914 1 -     31692 A
i Pithecia_vanzolinii.k141_831006                       I 720 T 721
s Plecturocebus_bernhardi.k141_959214                       21348 1 +     44506 A
i Plecturocebus_bernhardi.k141_959214                   I 722 T 723
s Plecturocebus_brunneus.k141_498086                        21558 1 +     67491 A
i Plecturocebus_brunneus.k141_498086                    I 722 T 723
s Plecturocebus_caligatus.k141_2539816                      11799 1 -     98129 A
i Plecturocebus_caligatus.k141_2539816                  I 722 T 723
s Plecturocebus_cinerascens.k141_744510                     21404 1 +    147771 A
i Plecturocebus_cinerascens.k141_744510                 I 722 T 723
s Plecturocebus_cupreus.k141_1223294                        21653 1 -     23762 A
i Plecturocebus_cupreus.k141_1223294                    I 721 T 722
s Plecturocebus_dubius.k141_3565563                          2120 1 -     55515 A
i Plecturocebus_dubius.k141_3565563                     I 722 T 723
s Plecturocebus_grovesi.k141_242819                         21473 1 +    152463 A
i Plecturocebus_grovesi.k141_242819                     I 722 T 723
s Plecturocebus_hoffmannsi.k141_1595076                      8233 1 +      8943 A
i Plecturocebus_hoffmannsi.k141_1595076                 I 722 T 723
s Plecturocebus_miltoni.k141_841561                         11193 1 +    134592 A
i Plecturocebus_miltoni.k141_841561                     I 722 T 723
s Plecturocebus_moloch.k141_890597                          21783 1 -     75465 A
i Plecturocebus_moloch.k141_890597                      I 722 T 723
s Pongo_abelii.NDHI03003816.1                              185688 1 -    373494 A
i Pongo_abelii.NDHI03003816.1                           C 0 T 741
s Pongo_pygmaeus.ctg62                                   19806336 1 +  19899266 A
i Pongo_pygmaeus.ctg62                                  C 0 T 1481
s Presbytis_comata.k141_672698                               4251 1 -     15069 A
i Presbytis_comata.k141_672698                          I 1260 T 1261
s Presbytis_mitrata.k141_860013                              4385 1 +     14865 A
i Presbytis_mitrata.k141_860013                         I 1260 T 1261
s Pygathrix_cinerea.k141_374971                             28374 1 +     56732 A
i Pygathrix_cinerea.k141_374971                         I 1254 T 1255
s Pygathrix_nigripes_b.ctg79                                 6804865 1 +   6970761 A
i Pygathrix_nigripes_b.ctg79                               I 1254 T 1255
s Pygathrix_nigripes_a.k141_101123                             4259 1 +     18040 A
i Pygathrix_nigripes_a.k141_101123                        I 1255 T 1256
s Rhinopithecus_bieti.k119_1391695                            482 1 -      1866 A
i Rhinopithecus_bieti.k119_1391695                      I 28 I 5
s Rhinopithecus_roxellana.NC_044549.1                   206376139 1 - 206558726 A
i Rhinopithecus_roxellana.NC_044549.1                   I 1256 T 1257
s Rhinopithecus_strykeri.ctg4                            44855039 1 -  45163003 A
i Rhinopithecus_strykeri.ctg4                           I 2508 T 1257
s Saimiri_boliviensis.NW_024100938.1                     15671223 1 -  43202129 A
i Saimiri_boliviensis.NW_024100938.1                    I 702 T 703
s Saimiri_cassiquiarensis.k141_808270                        3140 1 +     34089 A
i Saimiri_cassiquiarensis.k141_808270                   I 753 T 754
s Saimiri_macrodon.k141_2087127                              3081 1 -     60842 A
i Saimiri_macrodon.k141_2087127                         I 753 T 754
s Saimiri_oerstedii.k141_841116                              3176 1 +     67014 A
i Saimiri_oerstedii.k141_841116                         I 753 T 754
s Saimiri_sciureus.k141_1947592                              3154 1 +     60816 A
i Saimiri_sciureus.k141_1947592                         I 753 T 754
s Saimiri_ustus.k141_1282476                                 3091 1 -     76454 A
i Saimiri_ustus.k141_1282476                            I 753 T 754
s Sapajus_apella.ctg10                                   17339795 1 -  30362882 A
i Sapajus_apella.ctg10                                  I 723 T 724
s Sapajus_macrocephalus.k141_966464                         19170 1 -     62485 A
i Sapajus_macrocephalus.k141_966464                     I 723 T 724
s Semnopithecus_entellus.k141_1572367                        1867 1 +     15331 A
i Semnopithecus_entellus.k141_1572367                   I 28 I 5
s Semnopithecus_hypoleucos.k141_761524                       7263 1 +     20762 A
i Semnopithecus_hypoleucos.k141_761524                  I 1258 T 1259
s Semnopithecus_johnii.k141_785014                         117261 1 +    130994 A
i Semnopithecus_johnii.k141_785014                      I 28 I 5
s Semnopithecus_priam.k141_410937                           36052 1 +     46263 A
i Semnopithecus_priam.k141_410937                       I 28 I 5
s Semnopithecus_schistaceus.k141_387461                     29167 1 +     42640 A
i Semnopithecus_schistaceus.k141_387461                 I 28 I 5
s Semnopithecus_vetulus.k141_1143185                        12215 1 +     30600 A
i Semnopithecus_vetulus.k141_1143185                    I 28 I 5
s Symphalangus_syndactylus.tarseq_24                        13416 1 -  13920577 A
i Symphalangus_syndactylus.tarseq_24                    I 28 I 5
s Theropithecus_gelada.CM009951.1                       194006270 1 - 194193292 A
i Theropithecus_gelada.CM009951.1                       I 1235 T 1236
s Trachypithecus_auratus.k141_738098                        25373 1 +     38948 A
i Trachypithecus_auratus.k141_738098                    I 1258 T 1259
s Trachypithecus_crepusculus.k141_1588528                   19100 1 -     32910 A
i Trachypithecus_crepusculus.k141_1588528               I 1258 T 1259
s Trachypithecus_cristatus.k141_1011511                       487 1 -     12939 A
i Trachypithecus_cristatus.k141_1011511                 I 28 I 5
s Trachypithecus_francoisi.k141_768164                        427 1 -     14244 A
i Trachypithecus_francoisi.k141_768164                  I 28 I 5
s Trachypithecus_geei.k141_670367                           41820 1 -     54611 A
i Trachypithecus_geei.k141_670367                       I 1256 T 1257
s Trachypithecus_germaini.k141_878600                         650 1 +      1165 A
i Trachypithecus_germaini.k141_878600                   I 28 I 5
s Trachypithecus_hatinhensis.k141_504423                     1798 1 -     15592 A
i Trachypithecus_hatinhensis.k141_504423                I 28 I 5
s Trachypithecus_laotum.k141_760702                           455 1 +     14371 A
i Trachypithecus_laotum.k141_760702                     I 28 I 5
s Trachypithecus_leucocephalus.k141_283605                  50212 1 +     51589 A
i Trachypithecus_leucocephalus.k141_283605              I 1258 T 1259
s Trachypithecus_melamera.k141_238507                       13388 1 +     14732 A
i Trachypithecus_melamera.k141_238507                   I 1258 T 1259
s Trachypithecus_obscurus.k141_1115109                       3865 1 -     28054 A
i Trachypithecus_obscurus.k141_1115109                  I 1258 T 1259
s Trachypithecus_phayrei.ctg3                            44658660 1 -  44834318 A
i Trachypithecus_phayrei.ctg3                           I 1258 T 1259
s Trachypithecus_pileatus.k141_1022309                        963 1 +     13828 A
i Trachypithecus_pileatus.k141_1022309                  I 28 I 5
e Eptesicus_fuscus.JH977687.1                             4702138 0 +   6522550 C
e Macroglossus_sobrinus.MacSob_scaffold_879                699969 0 +    802869 C
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             37240 0 -     47444 C
e Petromus_typicus.PetTyp_scaffold_33007                    10183 0 -     36578 C
e Sorex_araneus.JH798170.1                               17748585 0 -  27805282 C
e Dinomys_branickii.DinBra_scaffold_1996                   155577 0 +    228994 C
e Erinaceus_europaeus.JH835290.1                         11530828 0 +  16010500 C
e Chaetophractus_vellerosus.ChaVel_scaffold_1070855          1225 0 -      1715 C
e Aplodontia_rufa.AprRuf_scaffold_156013                     1822 0 +      5067 C
e Oryctolagus_cuniculus.CM000803.1                      141873591 0 + 163896628 C
e Ochotona_princeps.JH802095.1                            4993906 0 -  23139505 C
e Lepus_americanus.LepAme_scaffold_62849                    10933 0 +     22452 C
e Perognathus_longimembris.PerPac_flattened_line_22291      40878 0 -     45160 C
e Dipodomys_stephensi.DipSte_scaffold_44365                 24877 0 +     28912 C
e Dipodomys_ordii.KN672545.1                              3653325 0 +   4240102 C
e Suricata_suricatta.SurSur_flattened_line_20339            25314 0 +     62062 C
e Chrysochloris_asiatica.ChrAsi_scaffold_141308              6936 0 -     12508 C
e Ziphius_cavirostris.ZipCav_flattened_line_127025           5296 0 -      8775 C
e Zalophus_californianus.ZalCal_flattened_line_4097        212013 0 -    227762 C
e Vulpes_lagopus.VulLag_flattened_line_2045                135484 0 -    281493 C
e Vicugna_pacos.KN269600.1                                1523032 0 -   2331223 C
e Ursus_maritimus.KK498671.1                              6512538 0 +  28682327 C
e Uropsilus_gracilis.UroGra_scaffold_4143_0                 24920 0 -     25548 C
e Tursiops_truncatus.MRVK01000923.1                      69311800 0 -  96451834 C
e Trichechus_manatus.JH594618.1                          16079674 0 +  31416278 C
e Tragulus_javanicus.TraJav_scaffold_14717                   3579 0 +     90398 C
e Tonatia_saurophila.TonSau_scaffold_3334                  134236 0 -    259118 C
e Tolypeutes_matacus.TolMat_scaffold_269431                  1985 0 +      6782 C
e Tapirus_terrestris.TapTer_scaffold_14939                  55751 0 +     99546 C
e Tapirus_indicus.TapInd_scaffold_176                      805090 0 +   1148477 C
e Tamandua_tetradactyla.TamTet_scaffold_26877               13101 0 +     45698 C
e Tadarida_brasiliensis.TadBra_scaffold_145589               4169 0 -      6213 C
e Sus_scrofa.CM000824.4                                 189270223 0 + 218635234 C
e Spilogale_gracilis.SpiGra_flattened_line_905             232746 0 -    276980 C
e Solenodon_paradoxus.SolPar_flattened_line_1012            16371 0 +    739146 C
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   29732 0 -    114521 C
e Saiga_tatarica.SaiTat_scaffold_82192                       5978 0 +     12214 C
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                17642 0 +    109198 C
e Rhinolophus_sinicus.LVEH01000179.1                      1786170 0 +   2252614 C
e Rangifer_tarandus.RanTarSib_scaffold_24239                14173 0 +     68503 C
e Puma_concolor.QAVW01000427.1                          131532074 0 - 161321710 C
e Pteropus_vampyrus.KN525959.1                             602300 0 -   3946241 C
e Pteropus_alecto.KB031157.1                             13244349 0 -  17261082 C
e Pteronura_brasiliensis.PteBra_flattened_line_1343        243986 0 -    344369 C
e Pteronotus_parnellii.KE867983.1                            2225 0 -     27784 C
e Procavia_capensis.ProCapCap_scaffold_15315                74297 0 +     78963 C
e Platanista_gangetica.PlaMin_flattened_line_72990           3766 0 +     21690 C
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            95219 0 +    112873 C
e Phocoena_phocoena.PhoPho_flattened_line_11948            119698 0 -    122454 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113411 0 -    135482 C
e Pantholops_hodgsonii.KE114631.1                         1064533 0 -   1292953 C
e Panthera_tigris.KE721879.1                              5025492 0 -   6340057 C
e Panthera_pardus.KV860323.1                              3635844 0 +  18214204 C
e Panthera_onca.PanOnc_flattened_line_1615                  32111 0 +    295523 C
e Ovis_canadensis.OviCan_scaffold_6251                      76886 0 +    140051 C
e Ovis_aries.CM001582.2                                 134075672 0 - 275406953 C
e Otocyon_megalotis.JAEUCK010005121.1                      305416 0 -    505867 C
e Orycteropus_afer.OryAfe_flattened_line_13509              41466 0 -     66828 C
e Orcinus_orca.KB316965.1                                 7223081 0 -   7562323 C
e Okapia_johnstoni.LVCL01S0017931.1                         35250 0 +     78940 C
e Odocoileus_virginianus.KZ101650.1                       1078095 0 +   1425656 C
e Odobenus_rosmarus.KB229369.1                             677283 0 -   3126709 C
e Nyctereutes_procyonoides.CAJHUB010000786.1                28077 0 +   3668941 C
e Noctilio_leporinus.NocLep_scaffold_12062                  47671 0 +     94413 C
e Neophocaena_asiaeorientalis.KZ688543.1                  3949397 0 -   4490290 C
e Neomonachus_schauinslandi.NINY01007774.1                4482627 0 -  14209539 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3427 0 -      8794 C
e Myotis_myotis.MyoMyo_scaffold_6123                         8549 0 +     66751 C
e Myotis_lucifugus.GL429887.1                             3463354 0 -   3747815 C
e Myotis_davidii.KB114863.1                               5017458 0 +   6462685 C
e Myotis_brandtii.KE161952.1                               965767 0 +   8389877 C
e Mustela_putorius.JH417978.1                             4421893 0 -  28371801 C
e Murina_feae.MurFea_scaffold_2254                          17446 0 -    100666 C
e Mungos_mungo.MunMun_flattened_line_8729                  142648 0 -    168139 C
e Moschus_moschiferus.MosMos_scaffold_146101                 2967 0 -      4346 C
e Mormoops_blainvillei.MorMeg_scaffold_2952                159555 0 +    265003 C
e Monodon_monoceros.MonMon_M_scaffold_5598                 144785 0 +    154973 C
e Mirounga_angustirostris.MirAng_flattened_line_8852         9028 0 -    104932 C
e Miniopterus_schreibersii.MinSch_scaffold_24116            32475 0 +     45743 C
e Miniopterus_natalensis.LDJU01000022.1                   8207804 0 +  10048721 C
e Micronycteris_hirsuta.MicHir_scaffold_37978               21045 0 -     32043 C
e Microgale_talazaci.MicTal_scaffold_34660                  29346 0 -     48017 C
e Mesoplodon_bidens.MesBid_scaffold_183284                   2060 0 +      2166 C
e Mellivora_capensis.MelCap_flattened_line_146202             322 0 -      1999 C
e Megaderma_lyra.MegLyr_scaffold_3562                       62623 0 -    234502 C
e Manis_pentadactyla.KN017078.1                             34533 0 +     58827 C
e Manis_javanica.JSZB01003966.1                            144461 0 +    252755 C
e Lycaon_pictus.CM007556.1                               11085084 0 +  39895028 C
e Loxodonta_africana.GL010040.1                          20589210 0 -  62548349 C
e Lipotes_vexillifer.KE558548.1                            134348 0 +   3060487 C
e Leptonychotes_weddellii.KB714749.1                      3083723 0 -   3498232 C
e Lasiurus_borealis.LasBor_scaffold_5102                   111932 0 -    115756 C
e Kogia_breviceps.KogBre_flattened_line_35920               22016 0 +     37189 C
e Inia_geoffrensis.IniGeo_flattened_line_66725               7190 0 +     17520 C
e Hyaena_hyaena.HyaHya_flattened_line_20729                 14008 0 -     67322 C
e Hipposideros_galeritus.HipGal_scaffold_104691              5941 0 -      9143 C
e Hipposideros_armiger.JXIK01001085.1                      276783 0 -    477199 C
e Hippopotamus_amphibius.HipAmp_scaffold_1308              145444 0 +    277961 C
e Heterohyrax_brucei.HetBruBak_scaffold_25354               54433 0 +     73687 C
e Hemitragus_hylocrius.HemHyl_scaffold_16669                25879 0 -     91191 C
e Helogale_parvula.HelPar_flattened_line_22962              14955 0 +     53719 C
e Giraffa_tippelskirchi.LVKQ01S012154.1                    179380 0 -    189561 C
e Felis_nigripes.FelNig_flattened_line_8080                 18920 0 +     52776 C
e Felis_catus_fca126.CM031420.1                         129277785 0 - 158578461 C
e Eubalaena_japonica.EubJap_flattened_line_7756             59833 0 +     89355 C
e Eschrichtius_robustus.EscRob_flattened_line_685          313403 0 +    330699 C
e Equus_przewalskii.ATBW01073585.1                          11031 0 +     92910 C
e Equus_caballus.CM000402.2                              13349541 0 +  41866177 C
e Equus_asinus.JREZ01000062.1                             5851039 0 -   7175178 C
e Enhydra_lutris.KZ291749.1                              85869511 0 +  99434291 C
e Elephantulus_edwardii.JH947210.1                        7804617 0 +  15467074 C
e Elaphurus_davidianus.JRFZ01086400.1                     1489865 0 +   1727528 C
e Eidolon_helvum.KE772537.1                                 10551 0 +     24177 C
e Echinops_telfairi.JH980316.1                           22994071 0 -  44670279 C
e Diceros_bicornis.DicBicMic_scaffold_9545                    948 0 +    151128 C
e Dicerorhinus_sumatrensis.PEKH010003161.1                 320304 0 +    993696 C
e Desmodus_rotundus.KZ672188.1                           18697178 0 -  18957592 C
e Delphinapterus_leucas.KZ290064.1                       80035201 0 -  96802777 C
e Dasypus_novemcinctus.JH568778.1                          180035 0 -   6883506 C
e Cryptoprocta_ferox.CryFer_flattened_line_19014            49746 0 -     70449 C
e Crocidura_indochinensis.CroInd_scaffold_38409             18062 0 -     19186 C
e Craseonycteris_thonglongyai.CraTho_scaffold_22679         37583 0 -     40477 C
e Condylura_cristata.JH655880.1                          60611126 0 +  78930452 C
e Choloepus_hoffmanni.KN194586.1                           760136 0 +    964067 C
e Choloepus_didactylus.ChoDid_scaffold_36182                14825 0 -     21363 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_160623         1401 0 -      9338 C
e Catagonus_wagneri.CatWag_scaffold_1305                   157163 0 -    276539 C
e Carollia_perspicillata.CarPer_scaffold_4436               57868 0 +     67245 C
e Capra_hircus.CM004562.1                               135704834 0 - 157403528 C
e Capra_aegagrus.CM003214.1                              21323607 0 + 157394656 C
e Canis_lupus_orion.HG994411.1                           16452652 0 -  44759192 C
e Canis_lupus_familiaris.chr31                           11085628 0 +  39895921 C
e Canis_lupus_dingo.QKWQ01001993.1                       11263099 0 -  35597290 C
e Canis_lupus_VD.CanFam_VD_scaffold_16982                   11456 0 +     87036 C
e CanFam4.chr31                                          11516438 0 +  39901454 C
e Camelus_ferus.KB016973.1                                2971360 0 +   6889770 C
e Camelus_dromedarius.KN271192.1                           395626 0 -  15254737 C
e Camelus_bactrianus.KN276303.1                           3217922 0 -   8989139 C
e Bubalus_bubalis.KI419065.1                              1229337 0 -   1914593 C
e Bos_taurus.CM000177.6                                 136293581 0 - 158972876 C
e Bos_mutus.JH883513.1                                     570222 0 -    998990 C
e Bos_indicus.CM003021.1                                138137848 0 - 161108492 C
e Bison_bison.KN264915.1                                  6557609 0 +   6870073 C
e Beatragus_hunteri.BeaHun_scaffold_21644                   41598 0 -     72089 C
e Balaenoptera_bonaerensis.DF502048.1                        3748 0 -     13118 C
e Balaenoptera_acutorostrata.KI537095.1                  26378517 0 +  51448160 C
e Artibeus_jamaicensis.ArtJam_scaffold_41619                 7070 0 -     29036 C
e Antilocapra_americana.AntAmePen_scaffold_42841            29102 0 +     33004 C
e Anoura_caudifer.AnoCau_scaffold_422                      388674 0 -    631301 C
e Ammotragus_lervia.NIVO01013474.1                        3518503 0 +   4113121 C
e Ailurus_fulgens.LNAC01000003.1                          7091779 0 -  16596857 C
e Ailuropoda_melanoleuca.LNAT01000321.1                  10655052 0 +  23371972 C
e Acinonyx_jubatus.LLWD01000356.1                         2031734 0 +   3721120 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16946 0 -    119109 C
e Glis_glis.GliGli_scaffold_79770                           10587 0 -     18683 C
e Zapus_hudsonius.ZapHud_scaffold_64392                     13196 0 -     20485 C
e Jaculus_jaculus.JH725517.1                              8563485 0 +  11848649 C
e Hylobates_pileatus_a.tarseq_592                             30916 0 -     60944 C
e Hylobates_pileatus_b.ContigUN                                 14622423 0 -  25970782 C
e Allactaga_bullata.AllBul_scaffold_70162                   10745 0 -     22067 C
e Hylobates_muelleri.k141_1133650                            2312 0 -      2775 C
e Hylobates_klossii.k141_466549                              9322 0 +     11537 C
e Hylobates_agilis.k141_1485652                              1298 0 -      1697 C
e Hylobates_abbotti.k141_493872                              2877 0 +      5897 C
e Galeopterus_variegatus.GalVar_scaffold_354               154180 0 +    324696 C
e Microtus_ochrogaster.CM001673.1                        22817796 0 -  98408828 C
e Xerus_inauris.XerIna_scaffold_7898                       124959 0 -    134049 C
e Varecia_variegata.k141_775891                             22718 0 -     33872 C
e Varecia_rubra.k141_432109                                  3174 0 -     20643 C
e Tupaia_tana.TupTan_flattened_line_68454                    2598 0 +     13056 C
e Tupaia_chinensis.KB320831.1                             2790078 0 -   3938065 C
e Tarsius_wallacei.k141_48636                               57721 0 +     65473 C
e Tarsius_lariang.k141_609102                               24405 0 +     42269 C
e Spermophilus_dauricus.KZ294190.1                        2237861 0 +   2842873 C
e Sigmodon_hispidus.SigHis_scaffold_11332                   97623 0 -    120886 C
e Rattus_norvegicus.chr11                                13913400 0 +  90463843 C
e Psammomys_obesus.NESX01026517.1                           31434 0 +     77221 C
e Propithecus_verreauxi.k141_158021                         37032 0 -     48185 C
e Propithecus_tattersalli.k141_907138                       14760 0 -     53241 C
e Propithecus_perrieri.k141_7554                            15121 0 +     27322 C
e Propithecus_edwardsi.k141_1317105                         33200 0 -     44753 C
e Propithecus_diadema.k141_577245                           40811 0 +     52369 C
e Propithecus_coronatus.k141_1353159                         1477 0 +     11805 C
e Propithecus_coquerelli.NW_012147997.1                    664950 0 -   2312742 C
e Prolemur_simus.MPIZ01000048.1                           6846333 0 +  12164890 C
e Peromyscus_maniculatus.KI615518.1                       4948002 0 -   8017169 C
e Perodicticus_potto.k141_713187                            22261 0 -     27972 C
e Perodicticus_ibeanus.k141_117958                           2962 0 -     23713 C
e Otolemur_garnettii.GL873528.1                          18006351 0 -  38779656 C
e Otolemur_crassicaudatus.k141_321880                       36909 0 +     38679 C
e Onychomys_torridus.OnyTor_scaffold_12578                  34826 0 +     62360 C
e Ondatra_zibethicus.OndZib_scaffold_6821                  123070 0 +    145789 C
e Octodon_degus.JH651621.1                                3683495 0 +  10294119 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65667288 0 +  89412551 C
e Nycticebus_coucang.k141_2051882                            1763 0 +      6470 C
e Nycticebus_bengalensis.LG16                            65564918 0 -  95554990 C
e Nannospalax_galili.KL201303.1                            108405 0 +    362372 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     88023 0 -    117718 C
e Muscardinus_avellanarius.MusAve_scaffold_9643              9070 0 +     98495 C
e Mus_spretus.CM004110.1                                 74328527 0 +  97876770 C
e Mus_pahari.LT608305.1                                  67553517 0 +  89017189 C
e Mus_musculus.chr16                                     75487346 0 +  98207768 C
e Mus_caroli.LT608236.1                                  70764309 0 +  92629107 C
e Mirza_zaza.k141_226143                                     3482 0 +      8497 C
e Microcebus_murinus.CM007691.1                          16508077 0 +  47401472 C
e Mesocricetus_auratus.KB708139.1                         1044678 0 -  26018355 C
e Meriones_unguiculatus.MerUng_scaffold_52233                9895 0 +     15977 C
e Marmota_marmota.CZRN01000005.1                         36871785 0 +  64221397 C
e Loris_tardigradus.ctg97                                 3776323 0 +   6799190 C
e Loris_lydekkerianus.k141_550999                            8572 0 +     84689 C
e Lepilemur_septentrionalis.k141_578524                     29467 0 -     33031 C
e Lepilemur_ruficaudatus.k141_617879                        76444 0 +    116806 C
e Lepilemur_dorsalis.k141_134267                            51202 0 +     63517 C
e Lepilemur_ankaranensis.k141_884009                        21829 0 +     39228 C
e Lemur_catta.scaffold_1                                258404957 0 - 285822530 C
e Indri_indri.k141_1884019                                   1138 0 -      2196 C
e Ictidomys_tridecemlineatus.JH393315.1                   7123945 0 +  13083262 C
e Hystrix_cristata.HysCri_scaffold_50788                     4078 0 +     22540 C
e Heterocephalus_glaber.JH602058.1                        2549028 0 +  31725842 C
e Hapalemur_occidentalis.k141_797938                        43268 0 -     54384 C
e Hapalemur_meridionalis.k141_186231                        26674 0 -     42470 C
e Hapalemur_griseus.k141_1387522                             3399 0 +     56096 C
e Hapalemur_gilberti.k141_97962                             25937 0 +     26611 C
e Hapalemur_alaotrensis.k141_1198205                         3462 0 +      3980 C
e Graphiurus_murinus.GraMur_scaffold_4493                   75116 0 +    118900 C
e Galagoides_demidoff.k141_1769638                           8266 0 +     27357 C
e Galago_senegalensis.k141_964197                           11202 0 -     43889 C
e Galago_moholi.ctg555                                     208821 0 -    847004 C
e Fukomys_damarensis.KN123630.1                          13890642 0 -  19261668 C
e Eulemur_sanfordi.k141_186399                              13678 0 -     29447 C
e Eulemur_rufus.k141_1620292                                30955 0 +     46535 C
e Eulemur_rubriventer.k141_411740                           16231 0 +     26808 C
e Eulemur_mongoz.k141_825972                                13765 0 +     27497 C
e Eulemur_macaco.k141_1341545                               13489 0 +     16540 C
e Eulemur_fulvus.k141_653297                                 9110 0 +    109717 C
e Eulemur_flavifrons.k141_903901                             5627 0 +     60246 C
e Eulemur_coronatus.k141_3240342                             9313 0 +     36558 C
e Eulemur_collaris.k141_311830                               2837 0 -      6809 C
e Eulemur_albifrons.k141_715837                              2902 0 +     13586 C
e Ellobius_talpinus.LOJH01090055.1                           4609 0 -      7838 C
e Ellobius_lutescens.LOEQ01003611.1                        237596 0 -    369425 C
e Dolichotis_patagonum.DolPat_scaffold_14102                34045 0 -     73477 C
e Daubentonia_madagascariensis.ctg11                     16842723 0 +  31942871 C
e Dasyprocta_punctata.DasPun_flattened_line_634             56784 0 -    236241 C
e Cuniculus_paca.CunPac_flattened_line_16637                15301 0 +     26546 C
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 28473 0 -     67205 C
e Ctenodactylus_gundi.CteGun_scaffold_447                  206103 0 -    956709 C
e Cricetulus_griseus.LT883672.1                          53026938 0 +  72327488 C
e Cricetomys_gambianus.CriGam_scaffold_949                 275406 0 -    399297 C
e Chinchilla_lanigera.JH721867.1                         15959694 0 +  43084221 C
e Cheirogaleus_medius.k141_133808                            5897 0 +     13308 C
e Cheirogaleus_major.k141_1157592                           56855 0 -     68416 C
e Cephalopachus_bancanus.k141_702587                         5958 0 +     21754 C
e Cavia_tschudii.CavTsc_scaffold_488                       174652 0 +    436027 C
e Cavia_porcellus.DS562889.1                             15796461 0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15784529 0 -  24422027 C
e Castor_canadensis.CasCan_scaffold_47037                   28354 0 +     33760 C
e Carlito_syrichta.NW_007248099.1                          306922 0 +    345090 C
e Capromys_pilorides.CapPil_scaffold_1557951                  388 1 +       644 I
e Avahi_peyrierasi.k141_2689020                               870 0 +      2719 C
e Avahi_laniger.k141_2840928                                 4550 0 -     16375 C
e Arctocebus_calabarensis.k141_1161114                      15769 0 +     17483 C
e Acomys_cahirinus.AcoCah_scaffold_1625                    110317 0 -    189883 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               10404 5 +    209709 CATTC
s Acinonyx_jubatus.LLWD01000356.1                         2031734 5 +   3721120 taaat
i Acinonyx_jubatus.LLWD01000356.1                       C 0 I 430
s Acomys_cahirinus.AcoCah_scaffold_1625                    110317 5 -    189883 TGGAT
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 I 676
s Ailuropoda_melanoleuca.LNAT01000321.1                  10655052 5 +  23371972 taaat
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 I 459
s Ailurus_fulgens.LNAC01000003.1                          7091779 5 -  16596857 TAAAT
i Ailurus_fulgens.LNAC01000003.1                        C 0 I 657
s Allactaga_bullata.AllBul_scaffold_70162                   10745 5 -     22067 TAGAC
i Allactaga_bullata.AllBul_scaffold_70162               C 0 I 695
s Allenopithecus_nigroviridis.k141_3103707                  60675 5 +     61638 CAAAT
i Allenopithecus_nigroviridis.k141_3103707              C 0 n 5
s Allochrocebus_lhoesti.k141_4825038                        52483 5 +     53391 CAAAT
i Allochrocebus_lhoesti.k141_4825038                    C 0 n 5
s Allochrocebus_preussi.k141_1202907                         3208 5 +     72529 CAAAT
i Allochrocebus_preussi.k141_1202907                    I 29 n 5
s Allochrocebus_solatus.k141_787528                          2783 5 +      3797 CAAAT
i Allochrocebus_solatus.k141_787528                     C 0 n 5
s Alouatta_belzebul.k141_1818029                             7956 5 -     18050 CAAAT
i Alouatta_belzebul.k141_1818029                        T 714 I 714
s Alouatta_caraya.k141_5460                                  9069 5 -     11521 CAAAT
i Alouatta_caraya.k141_5460                             T 714 I 714
s Alouatta_discolor.k141_811576                              8633 5 -     21359 CAAAT
i Alouatta_discolor.k141_811576                         T 714 I 714
s Alouatta_juara.k141_1856473                                7010 5 +      7227 CAAAT
i Alouatta_juara.k141_1856473                           C 0 n 5
s Alouatta_macconnelli.k141_1331706                          7924 5 -     10438 CAAAT
i Alouatta_macconnelli.k141_1331706                     T 714 I 714
s Alouatta_nigerrima.k141_2718643                            4580 5 +      7047 CAAAT
i Alouatta_nigerrima.k141_2718643                       T 714 I 714
s Alouatta_palliata.k141_1316127                             7866 5 +     10410 CAAAT
i Alouatta_palliata.k141_1316127                        T 713 I 713
s Alouatta_puruensis.k141_1284840                            1669 5 -      4927 CAAAT
i Alouatta_puruensis.k141_1284840                       T 714 I 714
s Alouatta_seniculus.k141_990213                             4599 5 +      6429 CAAAT
i Alouatta_seniculus.k141_990213                        T 714 I 714
s Ammotragus_lervia.NIVO01013474.1                        3518503 5 +   4113121 TAAAT
i Ammotragus_lervia.NIVO01013474.1                      C 0 I 445
s Anoura_caudifer.AnoCau_scaffold_422                      388674 5 -    631301 GAAAT
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 I 416
s Antilocapra_americana.AntAmePen_scaffold_42841            29102 5 +     33004 TAAAT
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 I 427
s Aotus_azarae.k141_3170768                                 60319 5 +     78111 CAAAT
i Aotus_azarae.k141_3170768                             T 718 I 718
s Aotus_griseimembra.k141_3275623                            3257 5 +     22701 CAAAT
i Aotus_griseimembra.k141_3275623                       T 721 I 721
s Aotus_nancymaae.KZ196176.1                              5747215 5 +   9889416 CAAAT
i Aotus_nancymaae.KZ196176.1                            T 720 I 720
s Aotus_trivirgatus.k141_1740727                             3800 5 -    104377 CAAAT
i Aotus_trivirgatus.k141_1740727                        T 720 I 720
s Aotus_vociferans.k141_718647                               3806 5 +     23246 CAAAT
i Aotus_vociferans.k141_718647                          T 720 I 720
s Aplodontia_rufa.AprRuf_scaffold_156013                     1822 5 +      5067 TAAAT
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 I 551
s Arctocebus_calabarensis.k141_1161114                      15769 5 +     17483 TAAAC
i Arctocebus_calabarensis.k141_1161114                  C 0 I 571
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 7070 5 -     29036 TAAAT
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 I 421
s Ateles_geoffroyi_b.tarseq_2582                             9537068 5 +  39197703 CAAAT
i Ateles_geoffroyi_b.tarseq_2582                           T 702 I 702
s Ateles_belzebuth.k141_1348307                             58352 5 +     85812 CAAAT
i Ateles_belzebuth.k141_1348307                         T 702 I 702
s Ateles_chamek.k141_1072810                                 9351 5 +     89302 CAAAT
i Ateles_chamek.k141_1072810                            T 702 I 702
s Ateles_geoffroyi_a.k141_1300742                             13856 5 -     58268 CAAAT
i Ateles_geoffroyi_a.k141_1300742                         T 702 I 702
s Ateles_marginatus.k141_899112                             61847 5 +    119057 CAAAT
i Ateles_marginatus.k141_899112                         T 702 I 702
s Ateles_paniscus.k141_1631200                               3798 5 -     25888 CAAAT
i Ateles_paniscus.k141_1631200                          T 720 I 720
s Avahi_laniger.k141_2840928                                 4550 5 -     16375 TAAAT
i Avahi_laniger.k141_2840928                            C 0 I 606
s Avahi_peyrierasi.k141_2689020                               870 5 +      2719 TAAAT
i Avahi_peyrierasi.k141_2689020                         C 0 I 605
s Balaenoptera_acutorostrata.KI537095.1                  26378517 5 +  51448160 taaat
i Balaenoptera_acutorostrata.KI537095.1                 C 0 I 443
s Balaenoptera_bonaerensis.DF502048.1                        3748 5 -     13118 taaat
i Balaenoptera_bonaerensis.DF502048.1                   C 0 I 444
s Beatragus_hunteri.BeaHun_scaffold_21644                   41598 5 -     72089 TAAAT
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 I 412
s Bison_bison.KN264915.1                                  6557609 5 +   6870073 TAAAT
i Bison_bison.KN264915.1                                C 0 I 432
s Bos_indicus.CM003021.1                                138137848 5 - 161108492 TAAAT
i Bos_indicus.CM003021.1                                C 0 I 432
s Bos_mutus.JH883513.1                                     570222 5 -    998990 TAAAT
i Bos_mutus.JH883513.1                                  C 0 I 432
s Bos_taurus.CM000177.6                                 136293581 5 - 158972876 TAAAT
i Bos_taurus.CM000177.6                                 C 0 I 432
s Bubalus_bubalis.KI419065.1                              1229337 5 -   1914593 TAAAT
i Bubalus_bubalis.KI419065.1                            C 0 I 431
s Cacajao_ayresi.k141_724503                               111691 5 -    171031 CAAAT
i Cacajao_ayresi.k141_724503                            T 721 I 721
s Cacajao_calvus.k141_96166                                 10717 5 +    125063 CAAAT
i Cacajao_calvus.k141_96166                             T 721 I 721
s Cacajao_hosomi.k141_303789                                12765 5 -    216513 CAAAT
i Cacajao_hosomi.k141_303789                            T 721 I 721
s Cacajao_melanocephalus.k141_1160263                        5305 5 -    134917 CAAAT
i Cacajao_melanocephalus.k141_1160263                   T 721 I 721
s Camelus_bactrianus.KN276303.1                           3217922 5 -   8989139 taaat
i Camelus_bactrianus.KN276303.1                         C 0 I 436
s Camelus_dromedarius.KN271192.1                           395626 5 -  15254737 taaat
i Camelus_dromedarius.KN271192.1                        C 0 I 437
s Camelus_ferus.KB016973.1                                2971360 5 +   6889770 taaat
i Camelus_ferus.KB016973.1                              C 0 I 436
s CanFam4.chr31                                          11516438 5 +  39901454 TAAAT
i CanFam4.chr31                                         C 0 I 449
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   11456 5 +     87036 TAAAT
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 I 449
s Canis_lupus_dingo.QKWQ01001993.1                       11263099 5 -  35597290 taaat
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 I 449
s Canis_lupus_familiaris.chr31                           11085628 5 +  39895921 taaat
i Canis_lupus_familiaris.chr31                          C 0 I 449
s Canis_lupus_orion.HG994411.1                           16452652 5 -  44759192 taaat
i Canis_lupus_orion.HG994411.1                          C 0 I 449
s Capra_aegagrus.CM003214.1                              21323607 5 + 157394656 TAAAT
i Capra_aegagrus.CM003214.1                             C 0 I 417
s Capra_hircus.CM004562.1                               135704834 5 - 157403528 TAAAT
i Capra_hircus.CM004562.1                               C 0 I 417
s Capromys_pilorides.CapPil_scaffold_933029                    18 5 +      1311 TAAAT
i Capromys_pilorides.CapPil_scaffold_933029             T 450 I 615
s Carlito_syrichta.NW_007248099.1                          306922 5 +    345090 CAAAT
i Carlito_syrichta.NW_007248099.1                       C 0 I 584
s Carollia_perspicillata.CarPer_scaffold_4436               57868 5 +     67245 TAAAT
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 I 420
s Castor_canadensis.CasCan_scaffold_47037                   28354 5 +     33760 TAAAT
i Castor_canadensis.CasCan_scaffold_47037               C 0 I 599
s Catagonus_wagneri.CatWag_scaffold_1305                   157163 3 -    276539 --AAT
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 I 412
s Cavia_aperea.AVPZ01000278.1                            15784529 5 -  24422027 TAAAT
i Cavia_aperea.AVPZ01000278.1                           C 0 I 610
s Cavia_porcellus.DS562889.1                             15796461 5 -  24440124 TAAAT
i Cavia_porcellus.DS562889.1                            C 0 I 612
s Cavia_tschudii.CavTsc_scaffold_488                       174652 5 +    436027 TAAAT
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 I 612
s Cebus_albifrons.Contig22                               18888544 5 -  29618158 CAAAT
i Cebus_albifrons.Contig22                              T 725 I 725
s Cebus_olivaceus.k141_93739                                 6088 5 -     26817 CAAAT
i Cebus_olivaceus.k141_93739                            T 725 I 725
s Cebus_unicolor.k141_239009                                10328 5 +     25043 CAAAT
i Cebus_unicolor.k141_239009                            T 725 I 725
s Cephalopachus_bancanus.k141_702587                         5958 5 +     21754 CAAAT
i Cephalopachus_bancanus.k141_702587                    C 0 I 581
s Ceratotherium_simum.JH767818.1                          4361646 5 +   7569818 taaat
i Ceratotherium_simum.JH767818.1                        C 0 I 1027
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         1401 5 -      9338 TAAAT
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 I 1024
s Cercocebus_atys.KQ010443.1                              6552467 5 +   6739814 CAAAT
i Cercocebus_atys.KQ010443.1                            T 1238 I 1238
s Cercocebus_chrysogaster.k141_2951608                      53944 5 -     54931 CAAAT
i Cercocebus_chrysogaster.k141_2951608                  C 0 n 5
s Cercocebus_lunulatus.k141_3387186                         18928 5 -     19697 CAAAT
i Cercocebus_lunulatus.k141_3387186                     C 0 n 5
s Cercocebus_torquatus.k141_3969582                         56459 5 -    107033 CAAAT
i Cercocebus_torquatus.k141_3969582                     T 1238 I 1238
s Cercopithecus_ascanius.k141_3371259                        2901 5 -      3853 CAAAT
i Cercopithecus_ascanius.k141_3371259                   I 86 n 5
s Cercopithecus_cephus.k141_598190                          26837 5 +     30494 CAAAT
i Cercopithecus_cephus.k141_598190                      T 1252 I 1252
s Cercopithecus_diana.k141_1490386                           2861 5 -      4022 CAAAT
i Cercopithecus_diana.k141_1490386                      C 0 n 5
s Cercopithecus_hamlyni.k141_381099                          2753 5 -      3505 CAAAT
i Cercopithecus_hamlyni.k141_381099                     C 0 n 5
s Cercopithecus_lowei.k141_623764                           21543 5 +     35983 CAAAT
i Cercopithecus_lowei.k141_623764                       T 1248 I 1248
s Cercopithecus_albogularis.ctg51                              11988080 5 +  12117833 CAAAT
i Cercopithecus_albogularis.ctg51                             T 1242 I 1242
s Cercopithecus_mona.ctg12                               46474833 5 +  46592721 CAAAT
i Cercopithecus_mona.ctg12                              T 1244 I 1244
s Cercopithecus_neglectus.k141_1474992                      32660 5 +     33420 CAAAT
i Cercopithecus_neglectus.k141_1474992                  C 0 n 5
s Cercopithecus_nictitans.k141_675209                        2696 5 -      3443 CAAAT
i Cercopithecus_nictitans.k141_675209                   C 0 n 5
s Cercopithecus_petaurista.k141_2037881                      3687 5 -      4669 CAAAT
i Cercopithecus_petaurista.k141_2037881                 C 0 n 5
s Cercopithecus_pogonias.k141_1977419                        3482 5 -      4411 CAAAT
i Cercopithecus_pogonias.k141_1977419                   C 0 n 5
s Cercopithecus_roloway.k141_3372345                         3012 5 -      4205 CAAAT
i Cercopithecus_roloway.k141_3372345                    C 0 n 5
s Chaetophractus_vellerosus.ChaVel_scaffold_1070855          1225 5 -      1715 TAAAT
i Chaetophractus_vellerosus.ChaVel_scaffold_1070855     C 0 n 0
s Cheirogaleus_major.k141_1157592                           56855 5 -     68416 TAAAT
i Cheirogaleus_major.k141_1157592                       C 0 I 605
s Cheirogaleus_medius.k141_133808                            5897 5 +     13308 TAAAT
i Cheirogaleus_medius.k141_133808                       C 0 I 605
s Cheracebus_lucifer.k141_619653                             3361 5 -     18223 CAAAT
i Cheracebus_lucifer.k141_619653                        T 700 I 700
s Cheracebus_lugens.k141_203936                             20384 5 +     25473 CAAAT
i Cheracebus_lugens.k141_203936                         T 700 I 700
s Cheracebus_regulus.k141_2128895                           39423 5 +     57117 CAAAT
i Cheracebus_regulus.k141_2128895                       T 700 I 700
s Cheracebus_torquatus.k141_315545                          44098 5 +     54541 CAAAT
i Cheracebus_torquatus.k141_315545                      T 700 I 700
s Chinchilla_lanigera.JH721867.1                         15959694 5 +  43084221 TAAAT
i Chinchilla_lanigera.JH721867.1                        C 0 I 594
s Chiropotes_israelita.k141_1189915                         68913 5 +    196370 CAAAT
i Chiropotes_israelita.k141_1189915                     T 708 I 708
s Chiropotes_sagulatus.k141_773804                          13093 5 +     40510 CAAAT
i Chiropotes_sagulatus.k141_773804                      T 708 I 708
s Chlorocebus_aethiops.ctg22                             15136294 5 -  15256731 CAAAT
i Chlorocebus_aethiops.ctg22                            T 1258 I 1258
s Chlorocebus_pygerythrus.k141_1486215                      31340 5 -     53260 CAAAT
i Chlorocebus_pygerythrus.k141_1486215                  T 1259 I 1259
s Chlorocebus_sabaeus.CM001963.2                        101141789 5 + 101219884 CAAAT
i Chlorocebus_sabaeus.CM001963.2                        T 1373 I 1373
s Choloepus_didactylus.ChoDid_scaffold_36182                14825 5 -     21363 TAAAT
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 I 439
s Choloepus_hoffmanni.KN194586.1                           760136 5 +    964067 taaat
i Choloepus_hoffmanni.KN194586.1                        C 0 I 439
s Chrysochloris_asiatica.ChrAsi_scaffold_141308              6936 5 -     12508 TAAAT
i Chrysochloris_asiatica.ChrAsi_scaffold_141308         C 0 N 0
s Colobus_angolensis.KN985967.1                          10880368 5 +  10971483 CAAAT
i Colobus_angolensis.KN985967.1                         T 4557 I 4557
s Colobus_guereza.LG08                                  147661526 5 + 156195979 CAAAT
i Colobus_guereza.LG08                                  T 1563 I 1563
s Colobus_polykomos.k141_1406057                            13513 5 +     23629 CAAAT
i Colobus_polykomos.k141_1406057                        T 1560 I 1560
s Condylura_cristata.JH655880.1                          60611126 5 +  78930452 gaaat
i Condylura_cristata.JH655880.1                         C 0 I 297
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         37583 5 -     40477 TAAAT
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 I 826
s Cricetomys_gambianus.CriGam_scaffold_949                 275406 5 -    399297 TGAAA
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 I 1460
s Cricetulus_griseus.LT883672.1                          53026938 5 +  72327488 TGAAT
i Cricetulus_griseus.LT883672.1                         C 0 I 574
s Crocidura_indochinensis.CroInd_scaffold_38409             18062 5 -     19186 TAAAT
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 I 408
s Cryptoprocta_ferox.CryFer_flattened_line_19014            49746 5 -     70449 TAAAT
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 I 433
s Ctenodactylus_gundi.CteGun_scaffold_447                  206103 5 -    956709 TAAAG
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 I 576
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 28473 5 -     67205 AAAAT
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 I 788
s Cuniculus_paca.CunPac_flattened_line_16637                15301 5 +     26546 TAAAT
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 I 993
s Dasyprocta_punctata.DasPun_flattened_line_634             56784 5 -    236241 TAAAT
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 I 608
s Dasypus_novemcinctus.JH568778.1                          180035 5 -   6883506 taaat
i Dasypus_novemcinctus.JH568778.1                       C 0 I 2424
s Daubentonia_madagascariensis.ctg11                     16842723 5 +  31942871 TAAAT
i Daubentonia_madagascariensis.ctg11                    C 0 I 594
s Delphinapterus_leucas.KZ290064.1                       80035201 5 -  96802777 taaat
i Delphinapterus_leucas.KZ290064.1                      C 0 I 438
s Desmodus_rotundus.KZ672188.1                           18697178 5 -  18957592 TAAAT
i Desmodus_rotundus.KZ672188.1                          C 0 I 419
s Dicerorhinus_sumatrensis.PEKH010003161.1                 320304 5 +    993696 TAAAT
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 I 1016
s Diceros_bicornis.DicBicMic_scaffold_9545                    948 5 +    151128 TAAAT
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 I 1024
s Dinomys_branickii.DinBra_scaffold_1996                   155577 5 +    228994 TAAAT
i Dinomys_branickii.DinBra_scaffold_1996                C 0 I 603
s Dipodomys_ordii.KN672545.1                              3653325 5 +   4240102 CAAAT
i Dipodomys_ordii.KN672545.1                            C 0 I 755
s Dipodomys_stephensi.DipSte_scaffold_44365                 24877 5 +     28912 CAAAT
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 I 846
s Dolichotis_patagonum.DolPat_scaffold_14102                34045 5 -     73477 TAAAT
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 I 598
s Eidolon_helvum.KE772537.1                                 10551 5 +     24177 taaat
i Eidolon_helvum.KE772537.1                             C 0 I 435
s Elaphurus_davidianus.JRFZ01086400.1                     1489865 5 +   1727528 TAAAT
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 I 432
s Elephantulus_edwardii.JH947210.1                        7804617 5 +  15467074 TAAAT
i Elephantulus_edwardii.JH947210.1                      C 0 I 10712
s Ellobius_lutescens.LOEQ01003611.1                        237596 5 -    369425 TAGAT
i Ellobius_lutescens.LOEQ01003611.1                     C 0 I 569
s Ellobius_talpinus.LOJH01090055.1                           4609 5 -      7838 TAGAT
i Ellobius_talpinus.LOJH01090055.1                      C 0 I 572
s Enhydra_lutris.KZ291749.1                              85869511 5 +  99434291 taaat
i Enhydra_lutris.KZ291749.1                             C 0 I 453
s Eptesicus_fuscus.JH977687.1                             4702138 5 +   6522550 GAAAT
i Eptesicus_fuscus.JH977687.1                           C 0 I 415
s Equus_asinus.JREZ01000062.1                             5851039 5 -   7175178 taaat
i Equus_asinus.JREZ01000062.1                           C 0 I 703
s Equus_caballus.CM000402.2                              13349541 5 +  41866177 TAAAT
i Equus_caballus.CM000402.2                             C 0 I 704
s Equus_przewalskii.ATBW01073585.1                          11031 5 +     92910 TAAAT
i Equus_przewalskii.ATBW01073585.1                      C 0 I 704
s Erinaceus_europaeus.JH835290.1                         11530828 5 +  16010500 TAAAT
i Erinaceus_europaeus.JH835290.1                        C 0 I 462
s Erythrocebus_patas.Contig8                             48768472 5 -  48907691 CAAAT
i Erythrocebus_patas.Contig8                            T 1260 I 1260
s Eschrichtius_robustus.EscRob_flattened_line_685          313403 5 +    330699 TAAAT
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 I 442
s Eubalaena_japonica.EubJap_flattened_line_7756             59833 5 +     89355 TAAAT
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 I 466
s Eulemur_albifrons.k141_715837                              2902 5 +     13586 TAAAT
i Eulemur_albifrons.k141_715837                         C 0 I 600
s Eulemur_collaris.k141_311830                               2837 5 -      6809 TAAAT
i Eulemur_collaris.k141_311830                          C 0 I 600
s Eulemur_coronatus.k141_3240342                             9313 5 +     36558 TAAAT
i Eulemur_coronatus.k141_3240342                        C 0 I 599
s Eulemur_flavifrons.k141_903901                             5627 5 +     60246 TAAAT
i Eulemur_flavifrons.k141_903901                        C 0 I 601
s Eulemur_fulvus.k141_653297                                 9110 5 +    109717 TAAAT
i Eulemur_fulvus.k141_653297                            C 0 I 600
s Eulemur_macaco.k141_1341545                               13489 5 +     16540 TAAAT
i Eulemur_macaco.k141_1341545                           C 0 I 601
s Eulemur_mongoz.k141_825972                                13765 5 +     27497 TAAAT
i Eulemur_mongoz.k141_825972                            C 0 I 600
s Eulemur_rubriventer.k141_411740                           16231 5 +     26808 TAAAT
i Eulemur_rubriventer.k141_411740                       C 0 I 591
s Eulemur_rufus.k141_1620292                                30955 5 +     46535 TAAAT
i Eulemur_rufus.k141_1620292                            C 0 I 600
s Eulemur_sanfordi.k141_186399                              13678 5 -     29447 TAAAT
i Eulemur_sanfordi.k141_186399                          C 0 I 600
s Felis_catus.CM001386.2                                129890710 5 - 159252932 taaat
i Felis_catus.CM001386.2                                C 0 I 430
s Felis_catus_fca126.CM031420.1                         129277785 5 - 158578461 taaat
i Felis_catus_fca126.CM031420.1                         C 0 I 427
s Felis_nigripes.FelNig_flattened_line_8080                 18920 5 +     52776 TAAAT
i Felis_nigripes.FelNig_flattened_line_8080             C 0 I 427
s Fukomys_damarensis.KN123630.1                          13890642 5 -  19261668 TAAAC
i Fukomys_damarensis.KN123630.1                         C 0 I 602
s Galago_moholi.ctg555                                     208821 4 -    847004 T-AAC
i Galago_moholi.ctg555                                  C 0 I 598
s Galago_senegalensis.k141_964197                           11202 4 -     43889 T-AAC
i Galago_senegalensis.k141_964197                       C 0 I 596
s Galagoides_demidoff.k141_1769638                           8266 4 +     27357 T-AAC
i Galagoides_demidoff.k141_1769638                      C 0 I 600
s Galeopterus_variegatus.GalVar_scaffold_354               154180 5 +    324696 TAAAT
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 I 594
s Giraffa_tippelskirchi.LVKQ01S012154.1                    179380 5 -    189561 TAAAT
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 I 717
s Glis_glis.GliGli_scaffold_79770                           10587 5 -     18683 TAAAT
i Glis_glis.GliGli_scaffold_79770                       C 0 I 576
s Gorilla_beringei.k141_111300                               3060 5 -     14630 CAAAT
i Gorilla_beringei.k141_111300                          T 744 I 744
s Gorilla_gorilla.LT578340.1                            119650159 5 - 195582420 CAAAT
i Gorilla_gorilla.LT578340.1                            T 744 I 744
s Graphiurus_murinus.GraMur_scaffold_4493                   75116 5 +    118900 TAAAT
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 I 788
s Hapalemur_alaotrensis.k141_1198205                         3462 5 +      3980 TAAAT
i Hapalemur_alaotrensis.k141_1198205                    C 0 n 0
s Hapalemur_gilberti.k141_97962                             25937 5 +     26611 TAAAT
i Hapalemur_gilberti.k141_97962                         C 0 n 0
s Hapalemur_griseus.k141_1387522                             3399 5 +     56096 TAAAT
i Hapalemur_griseus.k141_1387522                        C 0 I 707
s Hapalemur_meridionalis.k141_186231                        26674 5 -     42470 TAAAT
i Hapalemur_meridionalis.k141_186231                    C 0 I 708
s Hapalemur_occidentalis.k141_797938                        43268 5 -     54384 TAAAT
i Hapalemur_occidentalis.k141_797938                    C 0 I 712
s Helogale_parvula.HelPar_flattened_line_22962              14955 5 +     53719 TAAAT
i Helogale_parvula.HelPar_flattened_line_22962          C 0 I 432
s Hemitragus_hylocrius.HemHyl_scaffold_16669                25879 5 -     91191 TAAAT
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 I 416
s Heterocephalus_glaber.JH602058.1                        2549028 5 +  31725842 TAAAT
i Heterocephalus_glaber.JH602058.1                      C 0 I 606
s Heterohyrax_brucei.HetBruBak_scaffold_25354               54433 5 +     73687 TCAAT
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 I 1939
s Hippopotamus_amphibius.HipAmp_scaffold_1308              145444 5 +    277961 TAAAT
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 I 430
s Hipposideros_armiger.JXIK01001085.1                      276783 5 -    477199 caaat
i Hipposideros_armiger.JXIK01001085.1                   C 0 I 408
s Hipposideros_galeritus.HipGal_scaffold_104691              5941 5 -      9143 TAAAT
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 I 409
s Hoolock_leuconedys.ctg649                                    99740 5 +    115816 CAAAT
i Hoolock_leuconedys.ctg649                                C 0 I 2730
s Hyaena_hyaena.HyaHya_flattened_line_20729                 14008 5 -     67322 TAAAT
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 I 474
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           16946 5 -    119109 TAAAT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 I 597
s Hylobates_abbotti.k141_493872                              2877 5 +      5897 CAAAT
i Hylobates_abbotti.k141_493872                         C 0 I 965
s Hylobates_agilis.k141_1485652                              1298 5 -      1697 CAAAT
i Hylobates_agilis.k141_1485652                         C 0 n 0
s Hylobates_klossii.k141_466549                              9322 5 +     11537 CAAAT
i Hylobates_klossii.k141_466549                         C 0 I 960
s Hylobates_pileatus_b.ContigUN                                 14622423 5 -  25970782 CAAAT
i Hylobates_pileatus_b.ContigUN                                C 0 I 998
s Hylobates_muelleri.k141_1133650                            2312 5 -      2775 CAAAT
i Hylobates_muelleri.k141_1133650                       C 0 n 0
s Hylobates_pileatus_a.tarseq_592                             30916 5 -     60944 CAAAT
i Hylobates_pileatus_a.tarseq_592                         C 0 I 2351
s Hystrix_cristata.HysCri_scaffold_50788                     4078 5 +     22540 TACAT
i Hystrix_cristata.HysCri_scaffold_50788                C 0 I 578
s Ictidomys_tridecemlineatus.JH393315.1                   7123945 5 +  13083262 taaat
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 I 573
s Indri_indri.k141_1884019                                   1138 5 -      2196 TAAAT
i Indri_indri.k141_1884019                              C 0 I 611
s Inia_geoffrensis.IniGeo_flattened_line_66725               7190 5 +     17520 TAAAT
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 I 437
s Jaculus_jaculus.JH725517.1                              8563485 5 +  11848649 TAGAC
i Jaculus_jaculus.JH725517.1                            C 0 I 702
s Kogia_breviceps.KogBre_flattened_line_35920               22016 5 +     37189 TAAAT
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 I 443
s Lagothrix_lagothricha.k141_12968                          47922 5 -    147782 CAAAT
i Lagothrix_lagothricha.k141_12968                      T 717 I 717
s Lasiurus_borealis.LasBor_scaffold_5102                   111932 5 -    115756 GAAAT
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 I 417
s Lemur_catta.scaffold_1                                258404957 5 - 285822530 TAAAT
i Lemur_catta.scaffold_1                                C 0 I 705
s Lepilemur_ankaranensis.k141_884009                        21829 5 +     39228 TAAAT
i Lepilemur_ankaranensis.k141_884009                    C 0 I 603
s Lepilemur_dorsalis.k141_134267                            51202 5 +     63517 TAAAT
i Lepilemur_dorsalis.k141_134267                        C 0 I 605
s Lepilemur_ruficaudatus.k141_617879                        76444 5 +    116806 TAAAT
i Lepilemur_ruficaudatus.k141_617879                    C 0 I 607
s Lepilemur_septentrionalis.k141_578524                     29467 5 -     33031 TAAAT
i Lepilemur_septentrionalis.k141_578524                 C 0 I 604
s Leptonychotes_weddellii.KB714749.1                      3083723 5 -   3498232 taaat
i Leptonychotes_weddellii.KB714749.1                    C 0 I 458
s Lepus_americanus.LepAme_scaffold_62849                    10933 5 +     22452 TAAAT
i Lepus_americanus.LepAme_scaffold_62849                C 0 I 578
s Lipotes_vexillifer.KE558548.1                            134348 5 +   3060487 taaat
i Lipotes_vexillifer.KE558548.1                         C 0 I 444
s Lophocebus_aterrimus.ctg55                             19245555 5 +  19376315 CAAAT
i Lophocebus_aterrimus.ctg55                            T 1239 I 1239
s Loris_lydekkerianus.k141_550999                            8572 5 +     84689 TCAAC
i Loris_lydekkerianus.k141_550999                       C 0 I 607
s Loris_tardigradus.ctg97                                 3776323 5 +   6799190 TCAAC
i Loris_tardigradus.ctg97                               C 0 I 605
s Loxodonta_africana.GL010040.1                          20589210 5 -  62548349 TAAAT
i Loxodonta_africana.GL010040.1                         C 0 I 1702
s Lycaon_pictus.CM007556.1                               11085084 5 +  39895028 taaat
i Lycaon_pictus.CM007556.1                              C 0 I 449
s Macaca_arctoides.k141_2201161                             17241 5 +     74745 CAAAT
i Macaca_arctoides.k141_2201161                         T 1242 I 1242
s Macaca_assamensis.Contig65                             12703747 5 +  12821369 CAAAT
i Macaca_assamensis.Contig65                            T 1253 I 1253
s Macaca_cyclopis.k119_1168412                               5843 5 +      6569 CAAAT
i Macaca_cyclopis.k119_1168412                          C 0 n 5
s Macaca_fascicularis.k141_155037                           44145 5 +     63263 CAAAC
i Macaca_fascicularis.k141_155037                       T 1251 I 1251
s Macaca_fuscata.k119_925451                                  153 5 +     10231 CAAAT
i Macaca_fuscata.k119_925451                            I 21 n 5
s Macaca_leonina.k141_3421209                                2294 5 +      3017 CAAAT
i Macaca_leonina.k141_3421209                           C 0 n 5
s Macaca_maura.k141_251854                                  43907 5 -     79256 CACTC
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196032824 5 + 196197964 CAAAT
i Macaca_mulatta.NC_041755.1                            T 1253 I 1253
s Macaca_nemestrina.KQ004885.1                           11442930 5 +  11645122 CAAAT
i Macaca_nemestrina.KQ004885.1                          T 1252 I 1252
s Macaca_nigra.k141_282495                                   2854 5 -     46448 CACTC
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_1580474                                2684 5 -      3617 CAAAT
i Macaca_radiata.k141_1580474                           C 0 n 5
s Macaca_siberu.k141_741907                                 13016 5 -     55006 CAAAT
i Macaca_siberu.k141_741907                             T 1252 I 1252
s Macaca_silenus.Contig12                                43838053 5 +  43892939 CAAAT
i Macaca_silenus.Contig12                               T 1252 I 1252
s Macaca_thibetana.k99_116940                                5275 5 -      5978 CAAAT
i Macaca_thibetana.k99_116940                           C 0 n 5
s Macaca_tonkeana.k141_2870633                               2859 5 -     27140 CACTC
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                699969 5 +    802869 TAAAT
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 I 431
s Mandrillus_leucophaeus.scaffold125                     43434715 5 -  43563597 CAAAT
i Mandrillus_leucophaeus.scaffold125                    T 1239 I 1239
s Mandrillus_sphinx.Contig144                             4447541 5 -   4543643 CAAAT
i Mandrillus_sphinx.Contig144                           T 1239 I 1239
s Manis_javanica.JSZB01003966.1                            144461 5 +    252755 TAAAT
i Manis_javanica.JSZB01003966.1                         C 0 I 438
s Manis_pentadactyla.KN017078.1                             34533 5 +     58827 TAAAT
i Manis_pentadactyla.KN017078.1                         C 0 I 441
s Marmota_marmota.CZRN01000005.1                         36871785 5 +  64221397 taaat
i Marmota_marmota.CZRN01000005.1                        C 0 I 568
s Megaderma_lyra.MegLyr_scaffold_3562                       62623 5 -    234502 TGAAT
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 I 576
s Mellivora_capensis.MelCap_flattened_line_146202             322 5 -      1999 TAAAT
i Mellivora_capensis.MelCap_flattened_line_146202       C 0 I 452
s Meriones_unguiculatus.MerUng_scaffold_52233                9895 5 +     15977 TGGAT
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 I 553
s Mesocricetus_auratus.KB708139.1                         1044678 5 -  26018355 TGGAT
i Mesocricetus_auratus.KB708139.1                       C 0 I 573
s Mesoplodon_bidens.MesBid_scaffold_183284                   2060 5 +      2166 TAAAT
i Mesoplodon_bidens.MesBid_scaffold_183284              C 0 N 0
s Microcebus_murinus.CM007691.1                          16508077 5 +  47401472 TAAAT
i Microcebus_murinus.CM007691.1                         C 0 I 600
s Microgale_talazaci.MicTal_scaffold_34660                  29346 5 -     48017 TAAAT
i Microgale_talazaci.MicTal_scaffold_34660              C 0 I 1133
s Micronycteris_hirsuta.MicHir_scaffold_37978               21045 5 -     32043 TAAAT
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 I 428
s Microtus_ochrogaster.CM001673.1                        22817796 5 -  98408828 TAGAT
i Microtus_ochrogaster.CM001673.1                       C 0 I 572
s Miniopterus_natalensis.LDJU01000022.1                   8207804 5 +  10048721 GAAAC
i Miniopterus_natalensis.LDJU01000022.1                 C 0 I 420
s Miniopterus_schreibersii.MinSch_scaffold_24116            32475 5 +     45743 GAAAC
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 I 421
s Miopithecus_ogouensis.k141_2666161                        33374 5 +     34273 CAAAT
i Miopithecus_ogouensis.k141_2666161                    C 0 n 5
s Mirounga_angustirostris.MirAng_flattened_line_8852         9028 5 -    104932 TAAAT
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 I 661
s Mirza_zaza.k141_226143                                     3482 5 +      8497 TAAAT
i Mirza_zaza.k141_226143                                C 0 I 593
s Monodon_monoceros.MonMon_M_scaffold_5598                 144785 5 +    154973 TAAAT
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 I 442
s Mormoops_blainvillei.MorMeg_scaffold_2952                159555 5 +    265003 TAAAT
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 I 424
s Moschus_moschiferus.MosMos_scaffold_146101                 2967 5 -      4346 TAAAT
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 I 432
s Mungos_mungo.MunMun_flattened_line_8729                  142648 5 -    168139 TAAAT
i Mungos_mungo.MunMun_flattened_line_8729               C 0 I 430
s Murina_feae.MurFea_scaffold_2254                          17446 5 -    100666 GAAAT
i Murina_feae.MurFea_scaffold_2254                      C 0 I 414
s Mus_caroli.LT608236.1                                  70764309 5 +  92629107 TAGAT
i Mus_caroli.LT608236.1                                 C 0 I 551
s Mus_musculus.chr16                                     75487346 5 +  98207768 TGAAT
i Mus_musculus.chr16                                    C 0 I 550
s Mus_pahari.LT608305.1                                  67553517 5 +  89017189 TGGAT
i Mus_pahari.LT608305.1                                 C 0 I 621
s Mus_spretus.CM004110.1                                 74328527 5 +  97876770 TGAAT
i Mus_spretus.CM004110.1                                C 0 I 549
s Muscardinus_avellanarius.MusAve_scaffold_9643              9070 5 +     98495 TAAAT
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 I 572
s Mustela_putorius.JH417978.1                             4421893 5 -  28371801 taaat
i Mustela_putorius.JH417978.1                           C 0 I 453
s Myocastor_coypus.MyoCoy_scaffold_3653                     88023 5 -    117718 GAAAT
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 I 542
s Myotis_brandtii.KE161952.1                               965767 5 +   8389877 GAAAT
i Myotis_brandtii.KE161952.1                            C 0 I 418
s Myotis_davidii.KB114863.1                               5017458 5 +   6462685 GAAAT
i Myotis_davidii.KB114863.1                             C 0 I 416
s Myotis_lucifugus.GL429887.1                             3463354 5 -   3747815 GAAAT
i Myotis_lucifugus.GL429887.1                           C 0 I 417
s Myotis_myotis.MyoMyo_scaffold_6123                         8549 5 +     66751 GAAAT
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 I 416
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3427 5 -      8794 TAAAT
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 I 432
s Nannospalax_galili.KL201303.1                            108405 5 +    362372 TGAAT
i Nannospalax_galili.KL201303.1                         C 0 I 8280
s Nasalis_larvatus.k141_153429                               5753 5 +     48152 CAAAT
i Nasalis_larvatus.k141_153429                          T 1255 I 1255
s Neomonachus_schauinslandi.NINY01007774.1                4482627 5 -  14209539 taaat
i Neomonachus_schauinslandi.NINY01007774.1              C 0 I 454
s Neophocaena_asiaeorientalis.KZ688543.1                  3949397 5 -   4490290 taaat
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 I 443
s Noctilio_leporinus.NocLep_scaffold_12062                  47671 5 +     94413 TAAAT
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 I 415
s Nomascus_annamensis.k141_1439838                            625 5 +      3718 CAAAT
i Nomascus_annamensis.k141_1439838                      I 33 I 833
s Nomascus_concolor.k141_49591                                848 5 +      2014 CAAAT
i Nomascus_concolor.k141_49591                          T 737 I 737
s Nomascus_gabriellae.k141_906566                            2176 5 -      2544 CAAAT
i Nomascus_gabriellae.k141_906566                       C 0 n 5
s Nomascus_siki_b.tarseq_80                             22652 5 -  18771707 CAAAT
i Nomascus_siki_b.tarseq_80                         T 773 I 773
s Nomascus_siki_a.k141_595747                                   401 5 +      4512 CAAAT
i Nomascus_siki_a.k141_595747                             T 737 I 737
s Nyctereutes_procyonoides.CAJHUB010000786.1                28077 5 +   3668941 taaat
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 I 449
s Nycticebus_bengalensis.LG16                            65564918 5 -  95554990 TCAAC
i Nycticebus_bengalensis.LG16                           C 0 I 702
s Nycticebus_coucang.k141_2051882                            1763 5 +      6470 TCAAC
i Nycticebus_coucang.k141_2051882                       C 0 I 586
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65667288 5 +  89412551 TCAAC
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 I 669
s Ochotona_princeps.JH802095.1                            4993906 5 -  23139505 GAAGT
i Ochotona_princeps.JH802095.1                          C 0 I 596
s Octodon_degus.JH651621.1                                3683495 5 +  10294119 aaaat
i Octodon_degus.JH651621.1                              C 0 I 606
s Odobenus_rosmarus.KB229369.1                             677283 5 -   3126709 TATAT
i Odobenus_rosmarus.KB229369.1                          C 0 I 443
s Odocoileus_virginianus.KZ101650.1                       1078095 5 +   1425656 taaat
i Odocoileus_virginianus.KZ101650.1                     C 0 I 432
s Okapia_johnstoni.LVCL01S0017931.1                         35250 5 +     78940 TAAAT
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 I 573
s Ondatra_zibethicus.OndZib_scaffold_6821                  123070 5 +    145789 TAGAT
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 I 566
s Onychomys_torridus.OnyTor_scaffold_12578                  34826 5 +     62360 TGAAT
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 I 562
s Orcinus_orca.KB316965.1                                 7223081 5 -   7562323 taaat
i Orcinus_orca.KB316965.1                               C 0 I 443
s Orycteropus_afer.OryAfe_flattened_line_13509              41466 5 -     66828 TAAAT
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 I 1764
s Oryctolagus_cuniculus.CM000803.1                      141873591 5 + 163896628 TAAAT
i Oryctolagus_cuniculus.CM000803.1                      C 0 I 554
s Otocyon_megalotis.JAEUCK010005121.1                      305416 5 -    505867 taaat
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 I 444
s Otolemur_crassicaudatus.k141_321880                       36909 4 +     38679 T-AAC
i Otolemur_crassicaudatus.k141_321880                   C 0 I 604
s Otolemur_garnettii.GL873528.1                          18006351 4 -  38779656 t-aac
i Otolemur_garnettii.GL873528.1                         C 0 I 590
s Ovis_aries.CM001582.2                                 134075672 5 - 275406953 taaat
i Ovis_aries.CM001582.2                                 C 0 I 417
s Ovis_canadensis.OviCan_scaffold_6251                      76886 5 +    140051 TAAAT
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 I 417
s Pan_paniscus.CM003386.1                               127572404 5 - 205426864 CAAAT
i Pan_paniscus.CM003386.1                               T 743 I 743
s Pan_troglodytes.CM009241.2                            120149557 5 - 196562556 CAAAT
i Pan_troglodytes.CM009241.2                            T 743 I 743
s Panthera_onca.PanOnc_flattened_line_1615                  32111 5 +    295523 TAAAT
i Panthera_onca.PanOnc_flattened_line_1615              C 0 I 431
s Panthera_pardus.KV860323.1                              3635844 5 +  18214204 taaat
i Panthera_pardus.KV860323.1                            C 0 I 432
s Panthera_tigris.KE721879.1                              5025492 5 -   6340057 taaat
i Panthera_tigris.KE721879.1                            C 0 I 431
s Pantholops_hodgsonii.KE114631.1                         1064533 5 -   1292953 TAAAT
i Pantholops_hodgsonii.KE114631.1                       C 0 I 417
s Papio_anubis.CM001492.2                               188153499 5 - 188283584 CAAAT
i Papio_anubis.CM001492.2                               T 1244 I 1244
s Papio_cynocephalus.k141_386926                            49711 5 +     76494 CAAAT
i Papio_cynocephalus.k141_386926                        I 133 n 5
s Papio_hamadryas.Contig15                               47510896 5 +  47705337 CAAAT
i Papio_hamadryas.Contig15                              T 1236 I 1236
s Papio_kindae.k141_5458022                                 64873 5 -    104429 CAAAT
i Papio_kindae.k141_5458022                             T 1237 I 1237
s Papio_papio.k141_3561084                                  14664 5 -     29451 CAAAT
i Papio_papio.k141_3561084                              T 582 n 5
s Papio_ursinus.k141_3762866                                35067 5 +     35859 CAAAT
i Papio_ursinus.k141_3762866                            C 0 n 5
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113411 5 -    135482 TAAAT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 I 447
s Perodicticus_ibeanus.k141_117958                           2962 5 -     23713 TAAAC
i Perodicticus_ibeanus.k141_117958                      C 0 I 601
s Perodicticus_potto.k141_713187                            22261 5 -     27972 TAAAC
i Perodicticus_potto.k141_713187                        C 0 I 600
s Perognathus_longimembris.PerPac_flattened_line_22291      40878 5 -     45160 AAAAT
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 I 834
s Peromyscus_maniculatus.KI615518.1                       4948002 5 -   8017169 TGGAT
i Peromyscus_maniculatus.KI615518.1                     C 0 I 578
s Petromus_typicus.PetTyp_scaffold_33007                    10183 5 -     36578 TAAAT
i Petromus_typicus.PetTyp_scaffold_33007                C 0 I 603
s Phocoena_phocoena.PhoPho_flattened_line_11948            119698 5 -    122454 TAAAT
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 I 443
s Piliocolobus_badius.k141_1497351                           2757 5 -      3310 CAAAT
i Piliocolobus_badius.k141_1497351                      C 0 n 5
s Piliocolobus_gordonorum.k141_902470                       22662 5 -     82327 CAAAT
i Piliocolobus_gordonorum.k141_902470                   C 0 n 5
s Piliocolobus_kirkii.k141_557609                           19409 5 +     19957 CAAAT
i Piliocolobus_kirkii.k141_557609                       C 0 n 5
s Piliocolobus_tephrosceles.PDMG02000036.1               26737423 5 +  26888534 CAAAT
i Piliocolobus_tephrosceles.PDMG02000036.1              T 1572 I 1572
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            95219 5 +    112873 TAAAT
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 I 410
s Pithecia_albicans.k141_991845                             41405 5 -     61926 CAAAT
i Pithecia_albicans.k141_991845                         T 721 I 721
s Pithecia_chrysocephala.k141_159118                        22834 5 +     78826 CAAAT
i Pithecia_chrysocephala.k141_159118                    T 721 I 721
s Pithecia_hirsuta.k141_1152968                              6785 5 -     15800 CAAAT
i Pithecia_hirsuta.k141_1152968                         T 721 I 721
s Pithecia_mittermeieri.k141_2119203                         9983 5 -     16101 CAAAT
i Pithecia_mittermeieri.k141_2119203                    T 721 I 721
s Pithecia_pissinattii.k141_1102319                          3292 5 +      9673 CAAAT
i Pithecia_pissinattii.k141_1102319                     T 721 I 721
s Pithecia_pithecia.tarseq_313                           13472286 5 -  19735023 CAAAT
i Pithecia_pithecia.tarseq_313                          T 721 I 721
s Pithecia_vanzolinii.k141_831006                           11194 5 -     31692 CAAAT
i Pithecia_vanzolinii.k141_831006                       T 721 I 721
s Platanista_gangetica.PlaMin_flattened_line_72990           3766 5 +     21690 TAAAT
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 I 443
s Plecturocebus_bernhardi.k141_959214                       20626 5 +     44506 CAAAT
i Plecturocebus_bernhardi.k141_959214                   T 723 I 723
s Plecturocebus_brunneus.k141_498086                        20836 5 +     67491 CAAAT
i Plecturocebus_brunneus.k141_498086                    T 723 I 723
s Plecturocebus_caligatus.k141_2539816                      11077 5 -     98129 CAAAT
i Plecturocebus_caligatus.k141_2539816                  T 723 I 723
s Plecturocebus_cinerascens.k141_744510                     20682 5 +    147771 CAAAT
i Plecturocebus_cinerascens.k141_744510                 T 723 I 723
s Plecturocebus_cupreus.k141_1223294                        20932 5 -     23762 CAAAT
i Plecturocebus_cupreus.k141_1223294                    T 722 I 722
s Plecturocebus_dubius.k141_3565563                          1398 5 -     55515 CAAAT
i Plecturocebus_dubius.k141_3565563                     T 723 I 723
s Plecturocebus_grovesi.k141_242819                         20751 5 +    152463 CAAAT
i Plecturocebus_grovesi.k141_242819                     T 723 I 723
s Plecturocebus_hoffmannsi.k141_1595076                      7511 5 +      8943 CAAAT
i Plecturocebus_hoffmannsi.k141_1595076                 T 723 I 723
s Plecturocebus_miltoni.k141_841561                         10471 5 +    134592 CAAAT
i Plecturocebus_miltoni.k141_841561                     T 723 I 723
s Plecturocebus_moloch.k141_890597                          21061 5 -     75465 CAAAT
i Plecturocebus_moloch.k141_890597                      T 723 I 723
s Pongo_abelii.NDHI03003816.1                              184948 5 -    373494 CAAAT
i Pongo_abelii.NDHI03003816.1                           T 741 I 741
s Pongo_pygmaeus.ctg62                                   19804856 5 +  19899266 CAAAT
i Pongo_pygmaeus.ctg62                                  T 1481 I 1481
s Presbytis_comata.k141_672698                               2991 5 -     15069 CAAAT
i Presbytis_comata.k141_672698                          T 1261 I 1261
s Presbytis_mitrata.k141_860013                              3125 5 +     14865 CAAAT
i Presbytis_mitrata.k141_860013                         T 1261 I 1261
s Procavia_capensis.ProCapCap_scaffold_15315                74297 5 +     78963 TCAAT
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 I 1939
s Prolemur_simus.MPIZ01000048.1                           6846333 5 +  12164890 TAAAT
i Prolemur_simus.MPIZ01000048.1                         C 0 I 710
s Propithecus_coquerelli.NW_012147997.1                    664950 5 -   2312742 NNNNN
i Propithecus_coquerelli.NW_012147997.1                 C 0 I 1302
s Propithecus_coronatus.k141_1353159                         1477 5 +     11805 TAAAT
i Propithecus_coronatus.k141_1353159                    C 0 I 605
s Propithecus_diadema.k141_577245                           40811 5 +     52369 TAAAT
i Propithecus_diadema.k141_577245                       C 0 I 606
s Propithecus_edwardsi.k141_1317105                         33200 5 -     44753 TAAAT
i Propithecus_edwardsi.k141_1317105                     C 0 I 606
s Propithecus_perrieri.k141_7554                            15121 5 +     27322 TAAAT
i Propithecus_perrieri.k141_7554                        C 0 I 606
s Propithecus_tattersalli.k141_907138                       14760 5 -     53241 TAAAT
i Propithecus_tattersalli.k141_907138                   C 0 I 606
s Propithecus_verreauxi.k141_158021                         37032 5 -     48185 TAAAT
i Propithecus_verreauxi.k141_158021                     C 0 I 605
s Psammomys_obesus.NESX01026517.1                           31434 5 +     77221 TAGAT
i Psammomys_obesus.NESX01026517.1                       C 0 I 564
s Pteronotus_parnellii.KE867983.1                            2225 5 -     27784 TATAT
i Pteronotus_parnellii.KE867983.1                       C 0 I 422
s Pteronura_brasiliensis.PteBra_flattened_line_1343        243986 5 -    344369 TAAAT
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 I 454
s Pteropus_alecto.KB031157.1                             13244349 5 -  17261082 taaat
i Pteropus_alecto.KB031157.1                            C 0 I 438
s Pteropus_vampyrus.KN525959.1                             602300 5 -   3946241 taaat
i Pteropus_vampyrus.KN525959.1                          C 0 I 437
s Puma_concolor.QAVW01000427.1                          131532074 5 - 161321710 taaat
i Puma_concolor.QAVW01000427.1                          C 0 I 431
s Pygathrix_cinerea.k141_374971                             27120 5 +     56732 CAAAT
i Pygathrix_cinerea.k141_374971                         T 1255 I 1255
s Pygathrix_nigripes_b.ctg79                                 6803611 5 +   6970761 CAAAT
i Pygathrix_nigripes_b.ctg79                               T 1255 I 1255
s Pygathrix_nigripes_a.k141_101123                             3004 5 +     18040 CAAAT
i Pygathrix_nigripes_a.k141_101123                        T 1256 I 1256
s Rangifer_tarandus.RanTarSib_scaffold_24239                14173 5 +     68503 TAAAT
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 I 431
s Rattus_norvegicus.chr11                                13913400 5 +  90463843 TGGAT
i Rattus_norvegicus.chr11                               C 0 I 533
s Rhinolophus_sinicus.LVEH01000179.1                      1786170 2 +   2252614 TA---
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 I 430
s Rhinopithecus_bieti.k119_102124                           13557 5 -     14454 CAAAT
i Rhinopithecus_bieti.k119_102124                       C 0 n 5
s Rhinopithecus_roxellana.NC_044549.1                   206374883 5 - 206558726 CAAAT
i Rhinopithecus_roxellana.NC_044549.1                   T 1257 I 1257
s Rhinopithecus_strykeri.ctg4                            44853783 5 -  45163003 CAAAT
i Rhinopithecus_strykeri.ctg4                           T 1257 I 1257
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                17642 5 +    109198 TAAAT
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 I 435
s Saiga_tatarica.SaiTat_scaffold_82192                       5978 5 +     12214 TAAAT
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 I 428
s Saimiri_boliviensis.NW_024100938.1                     15670521 5 -  43202129 CAAAT
i Saimiri_boliviensis.NW_024100938.1                    T 703 I 703
s Saimiri_cassiquiarensis.k141_808270                        2387 5 +     34089 CAAAT
i Saimiri_cassiquiarensis.k141_808270                   T 754 I 754
s Saimiri_macrodon.k141_2087127                              2328 5 -     60842 CAAAT
i Saimiri_macrodon.k141_2087127                         T 754 I 754
s Saimiri_oerstedii.k141_841116                              2423 5 +     67014 CAAAT
i Saimiri_oerstedii.k141_841116                         T 754 I 754
s Saimiri_sciureus.k141_1947592                              2401 5 +     60816 CAAAT
i Saimiri_sciureus.k141_1947592                         T 754 I 754
s Saimiri_ustus.k141_1282476                                 2338 5 -     76454 CAAAT
i Saimiri_ustus.k141_1282476                            T 754 I 754
s Sapajus_apella.ctg10                                   17339072 5 -  30362882 CAAAT
i Sapajus_apella.ctg10                                  T 724 I 724
s Sapajus_macrocephalus.k141_966464                         18447 5 -     62485 CAAAT
i Sapajus_macrocephalus.k141_966464                     T 724 I 724
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   29732 5 -    114521 TAAAT
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 I 434
s Semnopithecus_entellus.k141_1527475                       25545 5 +     26421 CAAAT
i Semnopithecus_entellus.k141_1527475                   C 0 n 5
s Semnopithecus_hypoleucos.k141_761524                       6005 5 +     20762 CAAAT
i Semnopithecus_hypoleucos.k141_761524                  T 1259 I 1259
s Semnopithecus_johnii.k141_1351450                         39740 5 +     40653 CAAAT
i Semnopithecus_johnii.k141_1351450                     C 0 n 5
s Semnopithecus_priam.k141_198153                           10297 5 -     12194 CAAAT
i Semnopithecus_priam.k141_198153                       C 0 n 5
s Semnopithecus_schistaceus.k141_653647                     23719 5 -     27512 CAAAT
i Semnopithecus_schistaceus.k141_653647                 C 0 n 5
s Semnopithecus_vetulus.k141_642050                         32738 5 -     33692 CAAAT
i Semnopithecus_vetulus.k141_642050                     C 0 n 5
s Sigmodon_hispidus.SigHis_scaffold_11332                   97623 5 -    120886 TGGAT
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 I 550
s Solenodon_paradoxus.SolPar_flattened_line_1012            16371 5 +    739146 TAAAT
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 I 416
s Sorex_araneus.JH798170.1                               17748585 5 -  27805282 taaat
i Sorex_araneus.JH798170.1                              C 0 I 843
s Spermophilus_dauricus.KZ294190.1                        2237861 5 +   2842873 taaat
i Spermophilus_dauricus.KZ294190.1                      C 0 I 574
s Spilogale_gracilis.SpiGra_flattened_line_905             232746 5 -    276980 TAAAT
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 I 445
s Suricata_suricatta.SurSur_flattened_line_20339            25314 5 +     62062 TAAAT
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 I 430
s Sus_scrofa.CM000824.4                                 189270223 5 + 218635234 taaat
i Sus_scrofa.CM000824.4                                 C 0 I 447
s Symphalangus_syndactylus.tarseq_24                     13900012 5 +  13920577 CAAAT
i Symphalangus_syndactylus.tarseq_24                    C 0 n 5
s Tadarida_brasiliensis.TadBra_scaffold_145589               4169 5 -      6213 TAAAT
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 I 407
s Tamandua_tetradactyla.TamTet_scaffold_26877               13101 5 +     45698 TAAAT
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 I 433
s Tapirus_indicus.TapInd_scaffold_176                      805090 5 +   1148477 TAAAT
i Tapirus_indicus.TapInd_scaffold_176                   C 0 I 435
s Tapirus_terrestris.TapTer_scaffold_14939                  55751 5 +     99546 TAAAT
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 I 434
s Tarsius_lariang.k141_609102                               24405 5 +     42269 CAAAT
i Tarsius_lariang.k141_609102                           C 0 I 585
s Tarsius_wallacei.k141_48636                               57721 5 +     65473 CAAAT
i Tarsius_wallacei.k141_48636                           C 0 I 585
s Theropithecus_gelada.CM009951.1                       194005035 5 - 194193292 CAAAT
i Theropithecus_gelada.CM009951.1                       T 1236 I 1236
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             37240 5 -     47444 TAAAT
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 I 594
s Tolypeutes_matacus.TolMat_scaffold_269431                  1985 5 +      6782 TAAAT
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 I 2406
s Tonatia_saurophila.TonSau_scaffold_3334                  134236 5 -    259118 TAAAT
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 I 421
s Trachypithecus_auratus.k141_738098                        24115 5 +     38948 CAAAT
i Trachypithecus_auratus.k141_738098                    T 1259 I 1259
s Trachypithecus_crepusculus.k141_1588528                   17842 5 -     32910 CAAAT
i Trachypithecus_crepusculus.k141_1588528               T 1259 I 1259
s Trachypithecus_cristatus.k141_27198                       23740 5 +     24652 CAAAT
i Trachypithecus_cristatus.k141_27198                   C 0 n 5
s Trachypithecus_francoisi.k141_1178450                      2618 5 -      3559 CAAAT
i Trachypithecus_francoisi.k141_1178450                 C 0 n 5
s Trachypithecus_geei.k141_670367                           40564 5 -     54611 CAAAT
i Trachypithecus_geei.k141_670367                       T 1257 I 1257
s Trachypithecus_germaini.k141_809503                       16563 5 +     17312 CAAAT
i Trachypithecus_germaini.k141_809503                   C 0 n 5
s Trachypithecus_hatinhensis.k141_357672                    23926 5 -     25040 CAAAT
i Trachypithecus_hatinhensis.k141_357672                C 0 n 5
s Trachypithecus_laotum.k141_171445                          2587 5 +      3528 CAAAT
i Trachypithecus_laotum.k141_171445                     C 0 n 5
s Trachypithecus_leucocephalus.k141_283605                  48954 5 +     51589 CAAAT
i Trachypithecus_leucocephalus.k141_283605              T 1259 I 1259
s Trachypithecus_melamera.k141_238507                       12130 5 +     14732 CAAAT
i Trachypithecus_melamera.k141_238507                   T 1259 I 1259
s Trachypithecus_obscurus.k141_1115109                       2607 5 -     28054 CAAAT
i Trachypithecus_obscurus.k141_1115109                  T 1259 I 1259
s Trachypithecus_phayrei.ctg3                            44657402 5 -  44834318 CAAAT
i Trachypithecus_phayrei.ctg3                           T 1259 I 1259
s Trachypithecus_pileatus.k141_469329                        2412 5 +      3372 CAAAT
i Trachypithecus_pileatus.k141_469329                   C 0 n 5
s Tragulus_javanicus.TraJav_scaffold_14717                   3579 5 +     90398 TAAAG
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 I 419
s Trichechus_manatus.JH594618.1                          16079674 5 +  31416278 TAAAT
i Trichechus_manatus.JH594618.1                         C 0 I 1700
s Tupaia_chinensis.KB320831.1                             2790078 5 -   3938065 CAAAT
i Tupaia_chinensis.KB320831.1                           C 0 I 1079
s Tupaia_tana.TupTan_flattened_line_68454                    2598 5 +     13056 TAAAT
i Tupaia_tana.TupTan_flattened_line_68454               C 0 I 819
s Tursiops_truncatus.MRVK01000923.1                      69311800 5 -  96451834 taaat
i Tursiops_truncatus.MRVK01000923.1                     C 0 I 441
s Uropsilus_gracilis.UroGra_scaffold_4143_0                 24920 5 -     25548 GAAAT
i Uropsilus_gracilis.UroGra_scaffold_4143_0             C 0 n 0
s Ursus_maritimus.KK498671.1                              6512538 5 +  28682327 taaat
i Ursus_maritimus.KK498671.1                            C 0 I 460
s Varecia_rubra.k141_432109                                  3174 5 -     20643 TAAAT
i Varecia_rubra.k141_432109                             C 0 I 600
s Varecia_variegata.k141_775891                             22718 5 -     33872 TAAAT
i Varecia_variegata.k141_775891                         C 0 I 598
s Vicugna_pacos.KN269600.1                                1523032 5 -   2331223 taaat
i Vicugna_pacos.KN269600.1                              C 0 I 433
s Vulpes_lagopus.VulLag_flattened_line_2045                135484 5 -    281493 TAAAT
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 I 449
s Xerus_inauris.XerIna_scaffold_7898                       124959 5 -    134049 TAAAT
i Xerus_inauris.XerIna_scaffold_7898                    C 0 I 577
s Zalophus_californianus.ZalCal_flattened_line_4097        212013 5 -    227762 TATAT
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 I 448
s Zapus_hudsonius.ZapHud_scaffold_64392                     13196 5 -     20485 TGGAC
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 I 569
s Ziphius_cavirostris.ZipCav_flattened_line_127025           5296 5 -      8775 TAAAT
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 I 442
e Echinops_telfairi.JH980316.1                           22994071 0 -  44670279 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               10409 91 +    209709 AT-CTCC-TTCCTAGG-AGTT-TCATCAGCCAG-G-G-AAA---AT-TGACTCCTC-AT-ATCAC-AG----G--AGACAA-GACT-AAGAGTCCAT-------TCCACA-CCAAGGC---ACA
s Acomys_cahirinus.AcoCah_scaffold_1625                    110998 27 -    189883 AT-CTTC-TATCAAGG-CCCT-TTATCATTC---------------------------------------------------------------------------------------------
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 676 I 25
s Allactaga_bullata.AllBul_scaffold_70162                   11445 65 -     22067 aa-attt-taccctgg-agct-gcatcaagtag-g-g-aaa---at-taattc----at-g-----gga---a--cagaga---ct-agaatcta-----------------------------
i Allactaga_bullata.AllBul_scaffold_70162               I 695 I 4
s Allenopithecus_nigroviridis.k141_3103728                   1011 97 +      1665 AT-CTcc-ttcccagg-agtt-tcatcagccag-g-g-aaa---at-taactcctc-at-atcac-ag----g--agagaa-gacg-aagagtccatactgtggaccaca-ccaagac---ag-
i Allenopithecus_nigroviridis.k141_3103728              I 5 C 0
s Allochrocebus_lhoesti.k141_3566948                          497 97 -     29318 AT-CTcc-ttcctagg-agtt-tcatcagccag-g-g-aaa---at-taactcctg-at-atcac-ag----g--agagaa-gacg-aagagtccatactgtggaccaca-ccaagac---ag-
i Allochrocebus_lhoesti.k141_3566948                    I 5 C 0
s Allochrocebus_preussi.k141_21674                            714 97 -      1421 AT-CTcc-ttcctagg-agtt-tcatcagccag-g-g-aaa---at-taactcctg-at-atcac-ag----g--agagaa-gacg-aagagtccatactgtggaccaca-ccaagac---ag-
i Allochrocebus_preussi.k141_21674                      I 5 C 0
s Allochrocebus_solatus.k141_371672                           391 97 -     80423 AT-CTcc-ttcctagg-agtt-tcatcagccag-g-g-aaa---at-taactcctg-at-atcac-ag----g--agagaa-gacg-aagagtccatactgtggaccaca-ccaagac---ag-
i Allochrocebus_solatus.k141_371672                     I 5 C 0
s Alouatta_belzebul.k141_1818029                             8675 91 -     18050 AT-ctcc-ttcctagg-agtt-tcatcaaccag-g-g-aaa---aa-taactcctt-at-atcac-ag----a--ggagaa-cact-agaagtccat-------accaca-tccagac---aga
i Alouatta_belzebul.k141_1818029                        I 714 C 0
s Alouatta_caraya.k141_5460                                  9788 91 -     11521 AT-CTCC-TTCCGAGG-AGTT-TCATCAAGCAG-G-G-AAA---AA-TAACTCCTT-AT-GTCAC-AG----A--GGAGAA-CACT-AGAAGTCCAT-------ACCACA-TCCAGAC---AGA
i Alouatta_caraya.k141_5460                             I 714 C 0
s Alouatta_discolor.k141_811576                              9352 91 -     21359 AT-ctcc-ttcctagg-agtt-tcatcaaccag-g-g-aaa---aa-taactcctt-at-atcac-ag----a--ggagaa-cact-agaagtccat-------accaca-tccagac---aga
i Alouatta_discolor.k141_811576                         I 714 C 0
s Alouatta_juara.k141_298055                                  643 91 +      1823 AT-CTCC-TTCCCAGG-AGTT-TCATCAACCAG-G-G-AAA---AA-TAACTCCTT-CT-ATCAC-AG----A--GGAGAA-CACT-AGAAGTCCAT-------ACCACA-TCCAGAC---AGA
i Alouatta_juara.k141_298055                            I 5 C 0
s Alouatta_macconnelli.k141_1331706                          8643 91 -     10438 AT-ctcc-ttcctagg-agtt-tcatcaaccag-g-g-aaa---aa-taactcctt-at-atcac-ag----a--ggagaa-cact-agaagtccat-------accaca-tccagac---aga
i Alouatta_macconnelli.k141_1331706                     I 714 C 0
s Alouatta_nigerrima.k141_2718643                            5299 91 +      7047 AT-ctcc-ttcctagg-agtt-tcatcaaccag-g-g-aaa---aa-taactcctt-at-atcac-ag----a--ggagaa-cact-agaagtccat-------accaca-tccagac---aga
i Alouatta_nigerrima.k141_2718643                       I 714 C 0
s Alouatta_palliata.k141_1316127                             8584 91 +     10410 AT-ctcc-ttcctagg-agtt-tcatcaaccag-g-g-aaa---aa-taactcctt-at-atcac-ag----a--ggagaa-cact-agaagtccat-------accaca-tccagac---aga
i Alouatta_palliata.k141_1316127                        I 713 C 0
s Alouatta_puruensis.k141_1284840                            2388 92 -      4927 AT-CTCC-TTCCTAGG-AGTT-TCATCAACCAG-G-G-AAA---AAATAACTCCTT-AT-ATCAC-AG----A--GGAGAA-CACT-AGAAGTCCAT-------ACCACA-TCCAGAC---AGA
i Alouatta_puruensis.k141_1284840                       I 714 C 0
s Alouatta_seniculus.k141_990213                             5318 91 +      6429 AT-CTCC-TTCCCAGG-AGTT-TCATCAACCAG-G-G-AAA---AA-TAACTCCTT-CT-ATCAC-AG----A--GGAGAA-CACT-AGAAGTCCAT-------ACCACA-TCCAGAC---AGA
i Alouatta_seniculus.k141_990213                        I 714 C 0
s Aotus_azarae.k141_3170768                                 61042 91 +     78111 CT-CTcc-ttcctagg-agtt-tcatcaaccag-g-g-aaa---aa-taactcctt-at-atcac-ag----g--agagaa-cact-acgagtccat-------accaca-tccagag---aga
i Aotus_azarae.k141_3170768                             I 718 C 0
s Aotus_griseimembra.k141_3275623                            3983 91 +     22701 CT-CTcc-ttcctagg-agtt-tcatcaaccag-g-g-aaa---aa-taactcctt-at-atcac-ag----g--agagaa-cact-acgagtccac-------gccaca-tccagag---aga
i Aotus_griseimembra.k141_3275623                       I 721 C 0
s Aotus_nancymaae.KZ196176.1                              5747940 91 +   9889416 CT-CTCC-TTCCTAGG-AGTT-TCATCAACCAG-G-G-AAA---AA-TAACTCCTT-AT-ATCAC-AG----G--AGAGAA-CACT-AGGAGTTCAT-------ACCACA-TCCAGAG---AGA
i Aotus_nancymaae.KZ196176.1                            I 720 C 0
s Aotus_trivirgatus.k141_1740727                             4525 91 -    104377 CT-CTcc-ttcctagg-agtt-tcatcaaccag-g-g-aaa---aa-taactcctt-at-atcac-ag----g--agagaa-cact-aggagttcat-------accaca-tccagag---aga
i Aotus_trivirgatus.k141_1740727                        I 720 C 0
s Aotus_vociferans.k141_718647                               4531 91 +     23246 CT-CTcc-ttcctagg-agtt-tcatcaaccag-g-g-aaa---aa-taactcctt-at-atcac-ag----g--agagaa-cact-aggagttcat-------accaca-tccagag---aga
i Aotus_vociferans.k141_718647                          I 720 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     2378 62 +      5067 ------t-tacccagg-agct-tcatcaaacag-g-g-aag---at-taacac----at-atcaT-T-----A--GACAGT---TT-CGAAGTTA-----------------------------
i Aplodontia_rufa.AprRuf_scaffold_156013                I 551 I 7
s Arctocebus_calabarensis.k141_1161114                      16345 55 +     17483 TT-CCCC-TTCAAGGG-AGTT-TCATCAA-----G-G-AAT---AT-TAACTGTTC-AT-ATCAC-AG----G--AGGG---------------------------------------------
i Arctocebus_calabarensis.k141_1161114                  I 571 I 20
s Ateles_geoffroyi_b.tarseq_2582                             9537775 91 +  39197703 AT-CTCC-TTCCTAGG-AGCT-TCATCAACCAG-G-G-AAA---AA-TAACTCCTT-AT-ATCAC-AG----A--AGAGAA-CACT-AGAAGTCCAT-------ACCACA-TCCAGAC---AGA
i Ateles_geoffroyi_b.tarseq_2582                           I 702 C 0
s Ateles_belzebuth.k141_1348307                             59059 91 +     85812 AT-CTCC-TTCCTAGG-AGCT-TCATCAACCAG-G-G-AAA---AA-TAACTCCTT-AT-ATCAC-AG----A--AGAGAA-CACT-AGAAGTCCAT-------ACCACA-TCCAGAC---AGA
i Ateles_belzebuth.k141_1348307                         I 702 C 0
s Ateles_chamek.k141_1072810                                10058 91 +     89302 AT-CTCC-TTCCTAGG-AGCT-TCATCAACCAG-G-G-AAA---AA-TAACTCCTT-AT-ATCAC-AG----A--AGAGAA-CACT-AGAAGTCCAT-------ACCACA-TCCAGAC---AGA
i Ateles_chamek.k141_1072810                            I 702 C 0
s Ateles_geoffroyi_a.k141_1300742                             14563 91 -     58268 AT-ctcc-ttcctagg-agct-tcatcaaccag-g-g-aaa---aa-taactcctt-at-atcac-ag----a--agagaa-cact-agaagtccat-------accaca-tccagac---aga
i Ateles_geoffroyi_a.k141_1300742                         I 702 C 0
s Ateles_marginatus.k141_899112                             62554 91 +    119057 AT-CTCC-TTCCTAGG-AGCT-TCATCAACCAG-G-G-AAA---AA-TAACTCCTT-AT-ATCAC-AG----A--AGAGAA-CACT-AGAAGTCCAT-------ACCACA-TCCAGAC---AGA
i Ateles_marginatus.k141_899112                         I 702 C 0
s Ateles_paniscus.k141_1631200                               4523 91 -     25888 AT-ctcc-ttcctagg-agct-tcatcaaccag-g-g-aaa---aa-taactcctt-at-atcac-ag----a--agagaa-cact-agaagtccat-------accaca-tccagac---aga
i Ateles_paniscus.k141_1631200                          I 720 C 0
s Avahi_laniger.k141_2840928                                 5161 91 -     16375 ac-cccc-ttcccagg-agtt-tcatcagccag-g-g-aag---at-taactaccc-ct-atcac-ag----g--aaagga-cact-agaagtccac-------atgata-cccagac---aga
i Avahi_laniger.k141_2840928                            I 606 C 0
s Avahi_peyrierasi.k141_2689020                              1480 91 +      2719 ac-cccc-ttcccagg-agtt-tcatcagccag-g-g-aag---at-taactaccc-ct-atcac-ag----g--aaagga-cact-agaagtccac-------atgata-cccagac---aga
i Avahi_peyrierasi.k141_2689020                         I 605 C 0
s Cacajao_ayresi.k141_724503                               112417 91 -    171031 AT-CTcc-ttcctagg-agtt-tcatcaacgag-g-g-aca---aa-aaactcctt-at-atcac-ag----g--agagga-cact-aggagtccat-------accaca-tccagac---aaa
i Cacajao_ayresi.k141_724503                            I 721 C 0
s Cacajao_calvus.k141_96166                                 11443 91 +    125063 AT-CTcc-ttcctagg-agtt-tcatcaacgag-g-g-aca---aa-aaactcctt-at-atcac-ag----g--agagga-cact-aggagtccat-------accaca-tccagac---aaa
i Cacajao_calvus.k141_96166                             I 721 C 0
s Cacajao_hosomi.k141_303789                                13491 91 -    216513 AT-CTcc-ttcctagg-agtt-tcatcaacgag-g-g-aca---aa-aaactcctt-at-atcac-ag----g--agagga-cact-aggagtccat-------accaca-tccagac---aaa
i Cacajao_hosomi.k141_303789                            I 721 C 0
s Cacajao_melanocephalus.k141_1160263                        6031 91 -    134917 AT-CTcc-ttcctagg-agtt-tcatcaacgag-g-g-aca---aa-aaactcctt-at-atcac-ag----g--agagga-cact-aggagtccat-------accaca-tccagac---aaa
i Cacajao_melanocephalus.k141_1160263                   I 721 C 0
s Capromys_pilorides.CapPil_scaffold_979108                   505 37 -      1248 ----------------------------------------G---AT-GAACTT----GT-ACCCT-AG--TGG--AGAGGG---CT-GCCAGGCA-----------------------------
i Capromys_pilorides.CapPil_scaffold_979108             I 44 I 9
s Carlito_syrichta.NW_007248099.1                          307511 91 +    345090 at-cccc-tccccaag-aATT-TTATCAACCAG-G-A-AAA---AT-TAACTCCTC-AT-ATCAC-AG----G--AAagaa-gact-agaagtttac-------accaca-cccagac---aga
i Carlito_syrichta.NW_007248099.1                       I 584 C 0
s Castor_canadensis.CasCan_scaffold_47037                   28958 70 +     33760 gt-ccct-gacccaag-agtt-tagtcaaccag-g-a-aag---at-tgactc----at-atgatagga---g--agaaaa---ct-agaagcca-----------------------------
i Castor_canadensis.CasCan_scaffold_47037               I 599 I 6
s Cavia_aperea.AVPZ01000278.1                            15785144 37 -  24422027 ----------------------------------------G---AT-GAACTT----AT-AACAT-TG--TAG--AGGGGA---CT-AGAAGTCA-----------------------------
i Cavia_aperea.AVPZ01000278.1                           I 610 I 9
s Cavia_porcellus.DS562889.1                             15797078 37 -  24440124 ----------------------------------------G---AT-GAACTT----AT-AACAT-TG--TAG--AGGGGA---CT-AGAAGTCA-----------------------------
i Cavia_porcellus.DS562889.1                            I 612 I 9
s Cavia_tschudii.CavTsc_scaffold_488                       175269 37 +    436027 ----------------------------------------g---at-gaactt----at-aacat-tgta--g--agggga---ct-agaagtca-----------------------------
i Cavia_tschudii.CavTsc_scaffold_488                    I 612 I 9
s Cebus_albifrons.Contig22                               18889274 91 -  29618158 AT-ATCC-TTCCTAGG-AGTT-TCATCAACCAG-G-G-AAA---AA-TAACTTCTT-AT-ATCAC-AG----G--AGAGAA-CACT-AGGAGTCCAT-------ACCACA-Tccagac---aga
i Cebus_albifrons.Contig22                              I 725 C 0
s Cebus_olivaceus.k141_93739                                 6818 91 -     26817 AT-ATcc-ttcctagg-agtt-tcatcaaccag-g-g-aaa---aa-taacttctt-at-atcac-ag----g--agagaa-cact-aggagtccat-------accaca-tccagac---aga
i Cebus_olivaceus.k141_93739                            I 725 C 0
s Cebus_unicolor.k141_239009                                11058 91 +     25043 AT-ATcc-ttcctagg-agtt-tcatcaaccag-g-g-aaa---aa-taacttctt-at-atcac-ag----g--agagaa-cact-aggagtccat-------accaca-tccagac---aga
i Cebus_unicolor.k141_239009                            I 725 C 0
s Cephalopachus_bancanus.k141_702587                         6544 91 +     21754 at-cccc-tccccaag-aatt-ttatcaaacag-g-a-aaa---at-taactcctc-at-atcac-ag----g--aaagaa-gact-agaagtttac-------accata-cccagac---aga
i Cephalopachus_bancanus.k141_702587                    I 581 C 0
s Cercocebus_atys.KQ010443.1                              6553710 90 +   6739814 AT-CTCC-TTCCTAGG-AGTT-TCATGAGCCAG-G-G-AAA---AT-TAACTCCTC-AT-ATCAC-AG----G--AGAGAA-GACA-AAGAGTCCAT-------ACCACA-CCAAGAC---AG-
i Cercocebus_atys.KQ010443.1                            I 1238 C 0
s Cercocebus_chrysogaster.k141_2328246                      25187 90 +     60454 AT-CTcc-ttcctagg-agtt-tcatcagccag-g-g-aaa---at-taactcctt-at-atcac-ag----g--agagaa-gacg-aagagtccat-------accaca-ccaagac---ag-
i Cercocebus_chrysogaster.k141_2328246                  I 5 C 0
s Cercocebus_lunulatus.k141_4634644                           392 90 -     21101 AT-CTcc-ttcctagg-agtt-tcatgagccag-g-g-aaa---at-taactcctc-at-atcac-ag----g--agagaa-gaca-aagagtccat-------accaca-ccaagac---ag-
i Cercocebus_lunulatus.k141_4634644                     I 5 C 0
s Cercocebus_torquatus.k141_3969582                         57702 90 -    107033 AT-CTcc-ttcctagg-agtt-tcatcagccag-g-g-aaa---at-taactcctc-at-atcac-ag----g--agagaa-gaca-aagagtccat-------accaca-ccaagac---ag-
i Cercocebus_torquatus.k141_3969582                     I 1238 C 0
s Cercopithecus_ascanius.k141_4123525                         596 97 -     17608 AT-CTcc-ttcctagg-agtt-tcatcagccag-g-g-aaa---at-taactcctc-at-atcac-ag----g--agagaa-gacg-aagagtccatacggtggaccaca-ccaagac---ac-
i Cercopithecus_ascanius.k141_4123525                   I 5 C 0
s Cercopithecus_cephus.k141_598190                          28094 97 +     30494 AT-CTcc-ttcctagg-agtt-tcatcagccag-g-g-aaa---at-taactcctc-at-atcac-ag----g--agagaa-gacg-aagagtccatacggtggaccaca-ccaagac---ag-
i Cercopithecus_cephus.k141_598190                      I 1252 C 0
s Cercopithecus_diana.k141_2980617                          56937 97 -     59240 AT-CTcc-ttcctagg-agtt-tcatcagccag-g-g-aaa---at-taactcctc-at-atcac-ag----g--agagaa-gacg-aagagtccatactgtggaccaca-ccaagac---ag-
i Cercopithecus_diana.k141_2980617                      I 5 C 0
s Cercopithecus_hamlyni.k141_129805                           638 97 +     16677 AT-CTcc-ttcctagg-agtt-tcatcagccag-g-g-aaa---at-taactcctc-at-atcac-ag----g--agagaa-gacg-aagagtccagactgtggaccaca-ccaagac---ag-
i Cercopithecus_hamlyni.k141_129805                     I 5 C 0
s Cercopithecus_lowei.k141_623764                           22796 97 +     35983 AT-CTcc-ttcctagg-agtt-tcatcagccag-g-g-aaa---at-taactcctc-at-atcac-ag----g--agagaa-gacg-aagagtccatactgtggaccaca-ccaagac---ag-
i Cercopithecus_lowei.k141_623764                       I 1248 C 0
s Cercopithecus_albogularis.ctg51                              11989327 97 +  12117833 AT-CTcc-ttcctagg-agtt-tcatcagccag-g-g-aaa---at-taactcctc-at-atcac-ag----g--agagaa-gacg-aagagtccatactgtggaccaca-ccaagac---ag-
i Cercopithecus_albogularis.ctg51                             I 1242 C 0
s Cercopithecus_mona.ctg12                               46476082 97 +  46592721 AT-CTcc-ttcctagg-agtt-tcatcagccag-g-g-aaa---at-taactcctc-at-atcac-ag----g--agagaa-gacg-aagagtccatactgtggaccaca-ccaagac---ag-
i Cercopithecus_mona.ctg12                              I 1244 C 0
s Cercopithecus_neglectus.k141_2078027                      39633 97 -     45581 AT-CTcc-ttcctagg-agtt-tcatcagccag-g-g-aaa---at-taactcctc-at-atcac-ag----g--agagaa-gacg-aagagtccatactgtggaccaca-ccaagac---ag-
i Cercopithecus_neglectus.k141_2078027                  I 5 C 0
s Cercopithecus_nictitans.k141_1129315                        642 97 +     35577 AT-CTcc-ttcctagg-agtt-tcatcagccag-g-g-aaa---at-taactcctc-at-atcac-ag----g--agagaa-gacg-aagagtccatactgtggaccaca-ccaagac---ag-
i Cercopithecus_nictitans.k141_1129315                  I 5 C 0
s Cercopithecus_petaurista.k141_64532                         415 97 -     25661 AT-CTcc-ttcctagg-agtt-tcatcagccag-g-g-aaa---at-taactcctc-at-atcac-ag----g--agagaa-gacg-aagagtccatactgtggaccaca-ccaagac---ag-
i Cercopithecus_petaurista.k141_64532                   I 5 C 0
s Cercopithecus_pogonias.k141_3109732                         393 97 -     17744 AT-CTcc-ttcctagg-agtt-tcatcagccag-g-g-aaa---at-taactcctc-at-atcac-ag----g--agagaa-gacg-aagagtccatactgtggaccaca-ccaagac---ag-
i Cercopithecus_pogonias.k141_3109732                   I 5 C 0
s Cercopithecus_roloway.k141_2263608                        20002 97 +     37128 AT-CTcc-ttcctagg-agtt-tcatcagccag-g-g-aaa---at-taactcctc-at-atcac-ag----g--agagaa-gatg-aagagtccatactgtggaccaca-ccaagac---ag-
i Cercopithecus_roloway.k141_2263608                    I 5 C 0
s Cheirogaleus_major.k141_1157592                           57465 90 -     68416 at-cccc-ttccgggg-agtt-tcatcaaccag-g-g-aag---at-taagtactc-cc-atcac-ag----g--gaagga-cact-agaagtcca--------atgaca-cccagac---aga
i Cheirogaleus_major.k141_1157592                       I 605 C 0
s Cheirogaleus_medius.k141_133808                            6507 91 +     13308 at-cccc-ttcccggg-agtt-tcatcaaccag-g-g-aag---at-taagtactc-cc-atcac-ag----g--gaagga-cact-agaagtccac-------atgaca-tccagac---aga
i Cheirogaleus_medius.k141_133808                       I 605 C 0
s Cheracebus_lucifer.k141_619653                             4066 92 -     18223 AT-CTcc-ttcctagc-agtt-tcatcaacgag-g-g-aca---aa-taacttctt-at-atcac-ag----g--agagaa-cacttaggagtccat-------accaca-tccagac---aga
i Cheracebus_lucifer.k141_619653                        I 700 C 0
s Cheracebus_lugens.k141_203936                             21089 92 +     25473 AT-CTcc-ttcctagc-agtt-tcatcaacgag-g-g-aca---aa-taacttctt-at-atcac-ag----g--agagaa-cacttaggagtccat-------accaca-tccagac---aga
i Cheracebus_lugens.k141_203936                         I 700 C 0
s Cheracebus_regulus.k141_2128895                           40128 89 +     57117 AT-CTCC-TTCCTAGC-AGTT-TCATCAACGAG-G-G-ACA---AA-TAACTTCTT-AT-ATCAC-AG----G--AGAGAA-CACTTAGGATTCCAT-------ACCACA-TCCAGAC------
i Cheracebus_regulus.k141_2128895                       I 700 C 0
s Cheracebus_torquatus.k141_315545                          44803 92 +     54541 AT-CTcc-ttcctagc-agtt-tcatcaacgag-g-g-aca---aa-taacttctt-at-atcac-ag----g--agagaa-cacttaggattccat-------accaca-tccagac---aga
i Cheracebus_torquatus.k141_315545                      I 700 C 0
s Chinchilla_lanigera.JH721867.1                         15960293 37 +  43084221 ----------------------------------------g---gt-gaactg----gt-accat-gg--tgg--aatagg---ct-agaagtca-----------------------------
i Chinchilla_lanigera.JH721867.1                        I 594 I 12
s Chiropotes_israelita.k141_1189915                         69626 91 +    196370 AT-CTcc-ttcctagg-agtt-tcatcagcgag-g-g-aca---aa-aaactcctt-at-atcac-ag----g--agagaa-cact-aggagtccat-------accaca-tccagac---aga
i Chiropotes_israelita.k141_1189915                     I 708 C 0
s Chiropotes_sagulatus.k141_773804                          13806 91 +     40510 AT-CTcc-ttcctagg-agtt-tcatcagcgag-g-g-aca---aa-aaactcctt-at-atcac-ag----g--agagaa-cact-aggagtccat-------accaca-tccagac---aga
i Chiropotes_sagulatus.k141_773804                      I 708 C 0
s Chlorocebus_aethiops.ctg22                             15137557 97 -  15256731 AT-CTGc-ttcctagg-agtt-tcatcagccgg-g-g-aaa---at-taactcctc-at-atcac-ag----g--agagaa-gacg-aagagtccatactgtggaccaca-ccaagac---ag-
i Chlorocebus_aethiops.ctg22                            I 1258 C 0
s Chlorocebus_pygerythrus.k141_1486215                      32604 97 -     53260 AT-CTGc-ttcctagg-agtt-tcatcagccgg-g-g-aaa---at-taactcctc-gt-atcac-ag----g--agagaa-gacg-aagagtccatactgtggaccaca-ccaagac---ag-
i Chlorocebus_pygerythrus.k141_1486215                  I 1259 C 0
s Chlorocebus_sabaeus.CM001963.2                        101143167 97 + 101219884 AT-CTGC-TTCCTAGG-AGTT-TCATCAGCCGG-G-G-AAA---AT-TAACTCCTC-AT-ATCAC-AG----G--AGAGAA-GACG-AAGAGTCCATCCTGTGGACCACA-CCAAGAC---AG-
i Chlorocebus_sabaeus.CM001963.2                        I 1373 C 0
s Colobus_angolensis.KN985967.1                          10884930 91 +  10971483 AT-CTCC-TTCCTAGG-AGTT-TCATCAGCCAG-G-G-AAA---AT-TAACTCCTC-AT-ATCAC-AG----G--AGAGAA-GACT-AAGAGTCCAT-------ACCACA-CCAAGAC---AGA
i Colobus_angolensis.KN985967.1                         I 4557 C 0
s Colobus_guereza.LG08                                  147663094 91 + 156195979 AT-CTcc-ttcctagg-agtt-tcatcagccag-g-g-aaa---at-taactcctc-at-atcac-ag----g--agagaa-gact-aagagtccat-------accaca-ccaagac---aga
i Colobus_guereza.LG08                                  I 1563 C 0
s Colobus_polykomos.k141_1406057                            15078 91 +     23629 AT-CTcc-ttcctagg-agtt-tcatcagccag-g-g-aaa---at-taactcttc-at-atcac-ag----g--agagaa-gact-aagagtccat-------accaca-ccaagac---aga
i Colobus_polykomos.k141_1406057                        I 1560 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 276871 62 -    399297 at-tctc-tatccagg-aact-ttattatttgg-g-g-aag---TT-TCATCA----AT-G-----GG---ATAGC--------CT-AGAAGCCA-----------------------------
i Cricetomys_gambianus.CriGam_scaffold_949              I 1460 I 6
s Cricetulus_griseus.LT883672.1                          53027517 62 +  72327488 GT-CCTT-TACCCAGG-GTCT-TAATCATTCAG-G-G-AAG---TT-TACCTC----AT-A-----GG---AAAGT--------CT-AGATGCCA-----------------------------
i Cricetulus_griseus.LT883672.1                         I 574 I 6
s Ctenodactylus_gundi.CteGun_scaffold_447                  206684 68 -    956709 at-cctc-tacacagg-aatt-ttgtcaaccaa-a-g-gag---at-taactc----at-ttta--gga---g--aagaaa---ct-ccaagtca-----------------------------
i Ctenodactylus_gundi.CteGun_scaffold_447               I 576 I 6
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 29266 37 -     67205 ----------------------------------------G---AT-GAATTT----GT-GCCCT-AG--TGG--ACCGGG---CT-GGAAACCA-----------------------------
i Ctenomys_sociabilis.CteSoc_scaffold_19489             I 788 I 9
s Cuniculus_paca.CunPac_flattened_line_16637                16299 37 +     26546 ----------------------------------------g---at-gaactt----gt-accat-ag--tgg--agggga---ct-agaagtca-----------------------------
i Cuniculus_paca.CunPac_flattened_line_16637            I 993 I 9
s Dasyprocta_punctata.DasPun_flattened_line_634             57397 37 -    236241 ----------------------------------------c---at-gtactt----gt-accat-ag--tgg--aagggg---ct-agaagtca-----------------------------
i Dasyprocta_punctata.DasPun_flattened_line_634         I 608 I 9
s Daubentonia_madagascariensis.ctg11                     16843322 91 +  31942871 at-ccct-ttccgggg-agtt-tcatcaaccag-g-g-aag---at-taaatactc-at-atcac-ag----g--agagga-cact-agaaatccac-------acaaca-cccagac---aga
i Daubentonia_madagascariensis.ctg11                    I 594 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   156185 37 +    228994 ----------------------------------------g---gt-gaactc----gt-aacag-ag--tgc--aggagg---ct-ggaagtcg-----------------------------
i Dinomys_branickii.DinBra_scaffold_1996                I 603 I 10
s Dipodomys_ordii.KN672545.1                              3654085 70 +   4240102 AT-CTTC-TTCCCAGG-AGTT-CAATCAaccaa-g-a-aaa---ac-taaaat----ac-atcACATG---AG--AGGAAA---AT-GCAAGCCA-----------------------------
i Dipodomys_ordii.KN672545.1                            I 755 I 6
s Dipodomys_stephensi.DipSte_scaffold_44365                 25728 70 +     28912 AT-CTTC-TTCCCAGG-AGTT-CAATCAACCAA-G-A-AAA---AC-TAAAAT----AC-ATCACATG---AG--AGGAAA---AT-GCAAGCCA-----------------------------
i Dipodomys_stephensi.DipSte_scaffold_44365             I 846 I 6
s Dolichotis_patagonum.DolPat_scaffold_14102                34648 36 -     73477 ----------------------------------------g---at-gaactt----gc-accat-tg--tgg--aggg-g---ct-agaagtca-----------------------------
i Dolichotis_patagonum.DolPat_scaffold_14102            I 598 I 9
s Ellobius_lutescens.LOEQ01003611.1                        238170 62 -    369425 AT-CCTT-TATCCAGG-GCCT-TTATCGTTCAA-G-G-AAG---TT-TACCTA----AT-G-----TA---AAAGT--------CT-AGATGTCA-----------------------------
i Ellobius_lutescens.LOEQ01003611.1                     I 569 I 6
s Ellobius_talpinus.LOJH01090055.1                           5186 62 -      7838 at-cctt-tatccagg-gcct-ttgtcgttcaa-g-g-aag---TT-TACCTA----AT-A-----TA---AAAGT--------CT-AGATGTCA-----------------------------
i Ellobius_talpinus.LOJH01090055.1                      I 572 I 6
s Erythrocebus_patas.Contig8                             48769737 97 -  48907691 AT-CTcc-ttcctagg-agtt-tcatcagccag-g-g-aaa---at-taacccctc-at-atcac-ag----g--agagaa-gaca-aagagtccatactgtggaccaca-ccaagac---ag-
i Erythrocebus_patas.Contig8                            I 1260 C 0
s Eulemur_albifrons.k141_715837                              3507 91 +     13586 at-ccct-gtcccgga-agtt-tcatcaaccag-g-g-aag---at-taactactc-ct-atcac-ag----g--aaagga-cact-agaagtccac-------atgaca-cccagac---aga
i Eulemur_albifrons.k141_715837                         I 600 C 0
s Eulemur_collaris.k141_311830                               3442 91 -      6809 at-ccct-gtcccgga-agtt-tcatcaaccag-g-g-aag---at-taactactc-ct-atcac-ag----g--aaagta-cact-agaagtccac-------atgaca-cccagac---aga
i Eulemur_collaris.k141_311830                          I 600 C 0
s Eulemur_coronatus.k141_3240342                             9917 91 +     36558 at-ccct-gtcccgga-agtt-tcatcaaccag-g-g-aag---at-taactactc-ct-atcac-ag----g--aaagga-cact-agaagtccac-------gtgaca-cccagac---aga
i Eulemur_coronatus.k141_3240342                        I 599 C 0
s Eulemur_flavifrons.k141_903901                             6233 91 +     60246 at-ccct-gtcccgga-agtt-tcatcaaccag-g-g-aag---at-taactactc-ct-atcac-ag----g--aaagga-cact-agaagtccac-------atgaca-cccagac---aga
i Eulemur_flavifrons.k141_903901                        I 601 C 0
s Eulemur_fulvus.k141_653297                                 9715 91 +    109717 at-ccct-gtcccgga-agtt-tcatcaaccag-g-g-aag---at-taactactc-ct-atcac-ag----g--aaagga-cact-agaagtccac-------atgaca-cccagac---aga
i Eulemur_fulvus.k141_653297                            I 600 C 0
s Eulemur_macaco.k141_1341545                               14095 91 +     16540 at-ccct-gtcccgga-agtt-tcatcaaccag-g-g-aag---at-taactactc-ct-atcac-ag----g--aaagga-cact-agaagtccac-------atgaca-cccagac---aga
i Eulemur_macaco.k141_1341545                           I 601 C 0
s Eulemur_mongoz.k141_825972                                14370 91 +     27497 at-ccct-gtcccgga-agtt-tcatcaaccag-g-g-aag---at-taactactc-ct-atcac-ag----g--aaagga-cact-agaagtccac-------atgaca-cccagac---aga
i Eulemur_mongoz.k141_825972                            I 600 C 0
s Eulemur_rubriventer.k141_411740                           16827 91 +     26808 at-tcct-gtcccgga-agtt-tcatcaaccag-g-g-aag---at-taactactc-ct-atcac-ag----g--aaagga-cact-agaagtccac-------atgaca-cccagac---aga
i Eulemur_rubriventer.k141_411740                       I 591 C 0
s Eulemur_rufus.k141_1620292                                31560 91 +     46535 at-ccct-gtcccgga-agtt-tcatcaaccag-g-g-aag---at-taactactc-ct-atcac-ag----g--aaagga-cact-agaagtccac-------atgaca-cccagac---aga
i Eulemur_rufus.k141_1620292                            I 600 C 0
s Eulemur_sanfordi.k141_186399                              14283 91 -     29447 at-ccct-gtcccgga-agtt-tcatcaaccag-g-g-aag---at-taactactc-ct-atcac-ag----g--aaagga-cact-agaagtccac-------atgaca-cccagac---aga
i Eulemur_sanfordi.k141_186399                          I 600 C 0
s Fukomys_damarensis.KN123630.1                          13891249 40 -  19261668 ----------------------------------------gaagat-gagctt----gt-atcat-agga--g--agtgga---ca-agaagtca-----------------------------
i Fukomys_damarensis.KN123630.1                         I 602 I 6
s Galago_moholi.ctg555                                     209423 86 -    847004 at-cccc-tttcaggg-cgtt--catcaaccag-g-g-aat---at-taactgttc-ac-atcac-ag----g--agagga-cact-cgaagtctac-------atgaca-ccc-------aga
i Galago_moholi.ctg555                                  I 598 C 0
s Galago_senegalensis.k141_964197                           11802 86 -     43889 at-cccc-tttcaggg-tgtt--catcaaccag-g-g-aat---at-taactgttc-ac-atcac-ag----g--agagga-cact-cgaagtctac-------atgaca-ccc-------aga
i Galago_senegalensis.k141_964197                       I 596 C 0
s Galagoides_demidoff.k141_1769638                           8870 87 +     27357 at-cccc-ttccagag-agtt-tcatcaaccag-g-g-aat---at-taactgttc-at-atcaa-tg----g--aaagga-agct-agaagtctac-------gtgaca-ccc-------aga
i Galagoides_demidoff.k141_1769638                      I 600 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               154779 76 +    324696 at-cttc-tccctggg-agtt-tcatcaaccag-g-g-aag---ag-aaactg----ga-attat-ag----g--agatga--g-----------ac-------accaca-cccagat---ag-
i Galeopterus_variegatus.GalVar_scaffold_354            I 594 I 2
s Glis_glis.GliGli_scaffold_79770                           11168 68 -     18683 at-cctc-tacccagg-agtt-ttaccaaccaagg-g-gat---at-taaatt----at-atcat-a-----g--gagact---tt-agaggtca-----------------------------
i Glis_glis.GliGli_scaffold_79770                       I 576 I 6
s Gorilla_beringei.k141_111300                               3809 91 -     14630 AT-CTcc-ttcctagg-agtt-tcattagccag-g-g-aaa---at-tgactcctc-at-atcac-ag----g--agataa-gact-aagagtccat-------accaca-ccaagac---aga
i Gorilla_beringei.k141_111300                          I 744 C 0
s Gorilla_gorilla.LT578340.1                            119650908 91 - 195582420 at-ctcc-ttcctagg-agtt-tcattagccag-g-g-aaa---at-tgactcctc-at-atcac-ag----g--agataa-gact-aagagtccat-------accaca-ccaagac---aga
i Gorilla_gorilla.LT578340.1                            I 744 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   75909 68 +    118900 at-cctc-tacccagg-agtt-ttactacccaagg-g-aat---at-taaatc----at-atcac-a-----a--cagagt---tt-acaggtca-----------------------------
i Graphiurus_murinus.GraMur_scaffold_4493               I 788 I 6
s Hapalemur_alaotrensis.k141_1280836                          332 91 +     10286 at-cccc-gtcccgga-agtt-tcatcaaccaa-g-g-aag---at-taactactc-ct-atcac-ag----g--aaaaga-cact-agaagtccac-------atgaca-cccagac---aga
i Hapalemur_alaotrensis.k141_1280836                    I 19 C 0
s Hapalemur_gilberti.k141_1254239                            8482 91 +      9690 at-ccct-gtcccgga-agtt-tcatcaaccag-g-g-aag---at-taactactc-ct-atcac-ag----g--aaaaga-cact-agaagtccac-------atgaca-cccagac---aga
i Hapalemur_gilberti.k141_1254239                       I 19 C 0
s Hapalemur_griseus.k141_1387522                             4111 91 +     56096 at-cccc-gtcccgga-agtt-tcatcaaccag-g-g-aag---at-taactactc-ct-atcac-ag----g--aaaaga-cact-agaagtccac-------atgaca-cccagac---aga
i Hapalemur_griseus.k141_1387522                        I 707 C 0
s Hapalemur_meridionalis.k141_186231                        27387 91 -     42470 at-cccc-gtcccgga-agtt-tcatcaaccag-g-g-aag---at-taactactc-ct-atcac-ag----g--aaaaga-cact-agaagtccac-------atgaca-cccagac---aga
i Hapalemur_meridionalis.k141_186231                    I 708 C 0
s Hapalemur_occidentalis.k141_797938                        43985 91 -     54384 at-cccc-gtcccgga-agtt-tcatcaaccag-g-g-aag---at-taactactc-ct-atcac-ag----g--aaaaga-cact-agaagtccac-------atgaca-cccagac---aga
i Hapalemur_occidentalis.k141_797938                    I 712 C 0
s Heterocephalus_glaber.JH602058.1                        2549639 40 +  31725842 ----------------------------------------gaggat-gaactt----gt-accat-ag--ggg--agtgga---ct-agaagcca-----------------------------
i Heterocephalus_glaber.JH602058.1                      I 606 I 6
s Hoolock_leuconedys.ctg903                                     4927 96 -     61166 AT-CTcc-ttcctagggagtg-tcatcagccag-g-g-aaa---at-tgactcccccgtgatcac-ag----g--agagaaagactcaagagtccaa-------accaca-ccaagac---aga
i Hoolock_leuconedys.ctg903                                I 5 I 4
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           17548 37 -    119109 ----------------------------------------g---at-gaactt----gc-aacac-tg--tgg--aggggg---at-agaagtca-----------------------------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       I 597 I 9
s Hystrix_cristata.HysCri_scaffold_50788                     4661 69 +     22540 gt-ccct-cacctggg-attt-ttgtcaatgag-a-g-aaa---at-gaattt----gt-atcat-ga---gg--agggga---ct-ggaagtca-----------------------------
i Hystrix_cristata.HysCri_scaffold_50788                I 578 I 6
s Ictidomys_tridecemlineatus.JH393315.1                   7124523 67 +  13083262 at-ccct-cactcagg-agct-tcatggaacag-g-g-aaa---at-taacac----at-gtcat-t-----g--gagagt---tc-agaagtca-----------------------------
i Ictidomys_tridecemlineatus.JH393315.1                 I 573 I 6
s Indri_indri.k141_1884019                                   1754 91 -      2196 at-cccc-ttcccggg-agtt-tcatcaaccag-g-g-aag---at-taactactc-ct-atcac-ag----g--aaagga-cact-aggagtccac-------atgata-cccagac---aga
i Indri_indri.k141_1884019                              I 611 C 0
s Jaculus_jaculus.JH725517.1                              8564192 65 +  11848649 aa-atct-taccctgg-agct-gcatcaagcag-g-g-aaa---at-taattc----at-a-----gga---a--cagaga---ct-agaagcca-----------------------------
i Jaculus_jaculus.JH725517.1                            I 702 I 4
s Lagothrix_lagothricha.k141_12968                          48644 91 -    147782 AT-ctcc-ttcctagg-agtt-tcatcaaccag-g-g-aaa---aa-taacacctt-at-attat-ag----a--agagaa-gact-agaagtccat-------accaca-tccagac---aga
i Lagothrix_lagothricha.k141_12968                      I 717 C 0
s Lemur_catta.scaffold_1                                258405667 91 - 285822530 at-cccc-gtcccgga-agtt-tcatcaaccag-g-g-aag---at-taactactc-ct-atcac-ag----g--aaaaga-cact-agaagtccac-------atgaca-cccagac---aga
i Lemur_catta.scaffold_1                                I 705 C 0
s Lepilemur_ankaranensis.k141_884009                        22437 91 +     39228 at-cccc-taccaggg-agct-tcaccaaccag-g-g-aag---at-taactactc-ct-atcac-ag----g--aaagga-cact-agaagtccac-------atgata-accagac---aca
i Lepilemur_ankaranensis.k141_884009                    I 603 C 0
s Lepilemur_dorsalis.k141_134267                            51812 91 +     63517 at-cccc-taccaggg-agct-tcaccaaccag-g-g-aag---at-taactactc-ct-atcac-ag----g--aaagga-cact-agaagtccac-------atgata-accagac---aca
i Lepilemur_dorsalis.k141_134267                        I 605 C 0
s Lepilemur_ruficaudatus.k141_617879                        77056 90 +    116806 at-cccc-taccgggg-agct-tcatcaaccag-g-g-aag---at-taactactc-ct-atcac-ag----g--aaagga-cact-agaagtccac-------atgata-acca-ac---aca
i Lepilemur_ruficaudatus.k141_617879                    I 607 C 0
s Lepilemur_septentrionalis.k141_578524                     30076 91 -     33031 at-cccc-taccaggg-agct-tcaccaaccag-g-g-aag---at-taactactc-ct-atcac-ag----g--aaagga-cact-agaagtccac-------atgata-accagac---aca
i Lepilemur_septentrionalis.k141_578524                 I 604 C 0
s Lepus_americanus.LepAme_scaffold_62849                    11516 46 +     22452 ac-c-------ct--g-agtt-ctaataaccag-g-g-aag---at--ggctt----gt-atctt-aa----g--aga----------------------------------------------
i Lepus_americanus.LepAme_scaffold_62849                I 578 I 10
s Lophocebus_aterrimus.ctg55                             19246799 90 +  19376315 AT-CTcc-tttctagg-agtt-tcatcagccag-g-g-aaa---at-taactcctc-at-atcac-ag----g--agagaa-gacg-aagagtccat-------accaca-ccaagac---ag-
i Lophocebus_aterrimus.ctg55                            I 1239 C 0
s Loris_lydekkerianus.k141_550999                            9184 87 +     84689 AT-CCCCCTTGGAAGG-AATT-TCATCAACCAG-G-G-AAT---AT-TAACTGTTC-AT-ATCAC-AA----G--AGAGGA-CCCT--GAAGTCTAT-------GTGATA-ccc-------aga
i Loris_lydekkerianus.k141_550999                       I 607 C 0
s Loris_tardigradus.ctg97                                 3776933 87 +   6799190 AT-CCCCCTTGGAAGG-AATT-TCATCAACCAG-G-G-AAT---AT-TAACTGTTC-AT-ATCAC-AA----G--AGAGGA-CCCT--GAAGTCTAT-------GTGATA-ccc-------aga
i Loris_tardigradus.ctg97                               I 605 C 0
s Macaca_arctoides.k141_2201161                             18488 90 +     74745 AT-CTcc-ttcctagg-agtt-tcatcagccag-g-g-aaa---at-taactcctc-at-atcac-ag----g--agagaa-gacg-aagagtccac-------accaca-ccaacac---ag-
i Macaca_arctoides.k141_2201161                         I 1242 C 0
s Macaca_assamensis.Contig65                             12705005 90 +  12821369 AT-CTcc-ttcctagg-agtt-tcatcagccag-g-g-aaa---at-taactcctc-at-atcac-ag----g--agagaa-gatg-aagagtccac-------accaca-ccaagac---ag-
i Macaca_assamensis.Contig65                            I 1253 C 0
s Macaca_cyclopis.k119_893486                                 650 90 -      3136 AT-CTcc-ttcctagg-agtt-tcatcagccag-g-g-aaa---at-taactcctc-at-atcac-ag----g--agagaa-gacg-aagagtccat-------accaca-ccaagac---ag-
i Macaca_cyclopis.k119_893486                           I 5 C 0
s Macaca_fascicularis.k141_155037                           45401 90 +     63263 AT-CTcc-ttcctagg-agtt-tcatcagccag-g-g-aaa---at-taactcctc-at-atcac-ag----g--agagaa-gaca-aagagtccat-------accaca-ccaagac---ag-
i Macaca_fascicularis.k141_155037                       I 1251 C 0
s Macaca_fuscata.k119_599327                                  167 90 -      2568 AT-CTcc-ttcctagg-actt-tcatcagccag-g-g-aaa---at-taactcctc-at-atcac-ag----g--agagaa-gacg-aagagtccac-------accaca-ccaagac---ag-
i Macaca_fuscata.k119_599327                            I 5 C 0
s Macaca_leonina.k141_467472                                  675 90 -      7381 AT-CTcc-ttcctagg-agtt-tcatcagccag-g-g-aaa---at-taactcctc-at-atcac-ag----g--agagaa-gacg-aagagtccat-------accaca-ccaagac---ag-
i Macaca_leonina.k141_467472                            I 5 C 0
s Macaca_maura.k141_251854                                  43912 90 -     79256 AT-CTcc-ttcctagg-agtt-tcatcagccag-g-g-aaa---at-taactcctc-at-atcac-ag----g--agagaa-gacg-aagagtccat-------accaca-ccaagac---ag-
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196034082 90 + 196197964 AT-CTCC-TTCCTAGG-AGTT-TCATCAGCCAG-G-G-AAA---AT-TAACTCCTC-AT-ATCAC-AG----G--AGAGAA-GACG-AAGAGTCCAT-------ACCACA-CCAAGAC---AG-
i Macaca_mulatta.NC_041755.1                            I 1253 C 0
s Macaca_nemestrina.KQ004885.1                           11444187 90 +  11645122 AT-CTCC-TTCCTAGG-AGTT-TCATCAGCCAG-G-G-AAA---AT-TAACTCCTC-AT-ATCAC-AG----G--AGAGAA-GACG-AAGAGTCCAT-------ACCACA-CCAAGAC---AG-
i Macaca_nemestrina.KQ004885.1                          I 1252 C 0
s Macaca_nigra.k141_282495                                   2859 90 -     46448 AT-CTcc-ttcctagg-agtt-tcatcagccag-g-g-aaa---at-taactcctc-at-atcac-ag----g--agagaa-gacg-aagagtccat-------accaca-ccaagac---ag-
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                 531 90 -     13212 AT-CTcc-ttcctagg-agtt-tcatcagccag-g-g-aaa---at-taactcctc-at-atcac-ag----g--agagaa-gacg-aagagtccac-------accaca-ccaagac---ag-
i Macaca_radiata.k141_3680256                           I 5 C 0
s Macaca_siberu.k141_741907                                 14273 90 -     55006 AT-CTcc-ttcctagg-agtt-tcatcagccag-g-g-aaa---at-taactcctc-at-atcac-ag----g--agagaa-gacg-aagagtccat-------accaca-ccaagac---ag-
i Macaca_siberu.k141_741907                             I 1252 C 0
s Macaca_silenus.Contig12                                43839310 90 +  43892939 AT-CTcc-ttcctagg-agtt-tcatcagccag-g-g-aaa---at-taactcctc-at-atcac-ag----g--agagaa-gacg-aagagtccat-------accaca-ccaagac---ag-
i Macaca_silenus.Contig12                               I 1252 C 0
s Macaca_thibetana.k99_662710                               15560 90 -     24607 AT-CTcc-ttcctagg-agtt-tcatcagccag-g-g-aaa---at-taactcctc-at-atcac-ag----g--agagaa-gacg-aagagtccac-------accaca-ccaagac---ag-
i Macaca_thibetana.k99_662710                           I 5 C 0
s Macaca_tonkeana.k141_2870633                               2864 90 -     27140 AT-CTcc-ttcctagg-agtt-tcatcagccag-g-g-aaa---at-taactcctc-at-atcac-ag----g--agagaa-gacg-aagagtccat-------accaca-ccaagac---ag-
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43435959 89 -  43563597 AT-CTcc-tttctagg-agtt-tcatcagccag-g-g--aa---at-taactcctc-at-atcac-ag----g--agagaa-gacg-aagagtccat-------accaca-cccagac---ag-
i Mandrillus_leucophaeus.scaffold125                    I 1239 C 0
s Mandrillus_sphinx.Contig144                             4448785 89 -   4543643 AT-CTcc-tttctagg-agtt-tcatcagccag-g-g--aa---at-taactcctc-at-atcac-ag----g--agagaa-gacg-aagagtccat-------accaca-cccagac---ag-
i Mandrillus_sphinx.Contig144                           I 1239 C 0
s Marmota_marmota.CZRN01000005.1                         36872358 67 +  64221397 at-ccct-catccagg-agct-tcatggaacag-g-g-aaa---at-taacac----at-gtcat-t-----g--gagagt---tc-agaagtca-----------------------------
i Marmota_marmota.CZRN01000005.1                        I 568 I 6
s Meriones_unguiculatus.MerUng_scaffold_52233               10453 27 +     15977 at-cctc-tctctagg-GCCT-TTATCATTC---------------------------------------------------------------------------------------------
i Meriones_unguiculatus.MerUng_scaffold_52233           I 553 I 25
s Mesocricetus_auratus.KB708139.1                         1045256 61 -  26018355 GT-C-TT-TACCCAGG-GCCT-TTATCATCCAG-G-G-AAG---TT-TACTTC----AT-A-----GG---AAAGT--------CT-AGATGCCA-----------------------------
i Mesocricetus_auratus.KB708139.1                       I 573 I 6
s Microcebus_murinus.CM007691.1                          16508682 90 +  47401472 at-cccc-ttccta-g-agTT-CCATCAACCAG-G-G-AAG---AT-TAACTACTC-CT-ATCAC-AG----G--AAAGGA-CACT-AGAAGTCCAC-------ATAACA-TCCAGAC---TGA
i Microcebus_murinus.CM007691.1                         I 600 C 0
s Microtus_ochrogaster.CM001673.1                        22818373 65 -  98408828 AT-CCTT-TATCCAGG-GCCT-TTATCTTTCAA-G-T-AAG---TT-Taccta----at-a-----taaaaaaaat--------ct-agatgtcA-----------------------------
i Microtus_ochrogaster.CM001673.1                       I 572 I 6
s Miopithecus_ogouensis.k141_2935907                          504 97 +     29742 AT-CTAC-tccctagg-agtt-tcatcagccag-g-g-aaa---at-taactcctc-at-atcac-ag----g--agagaa-gacg-aagagtccatactgtggaccaca-ccaagac---ag-
i Miopithecus_ogouensis.k141_2935907                    I 5 C 0
s Mirza_zaza.k141_226143                                     4080 90 +      8497 AT-TCCC-TTCCTA-G-AGTT-TCATCAACCAG-G-G-AAG---AT-TAACTACTC-CT-ATCAC-AG----G--AAAGGA-CACT-AGAAGTCCAC-------ATAACA-Tccagac---tga
i Mirza_zaza.k141_226143                                I 593 C 0
s Mus_caroli.LT608236.1                                  70764865 27 +  92629107 AT-CCTC-CATCCAGG-ACCT-TTATCATTC---------------------------------------------------------------------------------------------
i Mus_caroli.LT608236.1                                 I 551 I 25
s Mus_musculus.chr16                                     75487901 27 +  98207768 AT-CCTC-CATCCAGG-ACCT-TTATCATTC---------------------------------------------------------------------------------------------
i Mus_musculus.chr16                                    I 550 I 25
s Mus_pahari.LT608305.1                                  67554143 27 +  89017189 GT-TCTC-CATCCAGG-ACCT-TTATCCTTC---------------------------------------------------------------------------------------------
i Mus_pahari.LT608305.1                                 I 621 I 25
s Mus_spretus.CM004110.1                                 74329081 27 +  97876770 AT-CCTC-CATCCAGG-ACCT-TTATCATTC---------------------------------------------------------------------------------------------
i Mus_spretus.CM004110.1                                I 549 I 25
s Muscardinus_avellanarius.MusAve_scaffold_9643              9647 70 +     98495 gt-cctc-tacccagg-agtt-tcaccaaccaaga-aaaaa---at-taagtt----at-atcat-a-----g--gagatta--tt-ataagcca-----------------------------
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 572 I 6
s Myocastor_coypus.MyoCoy_scaffold_3653                     88570 37 -    117718 ----------------------------------------G---AT-GAACTT----GT-ACCCT-AA--TGG--AGAGGG---CT-GCAAAGCA-----------------------------
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 542 I 9
s Nannospalax_galili.KL201303.1                            116690 61 +    362372 AT-TCCC-TACCCAGG-AGTT-TCATTAATCAA-GGG-AAG---GT-TAACTC----AT-A-----GG---AG--A--------CT-AGAATTCG-----------------------------
i Nannospalax_galili.KL201303.1                         I 8280 I 3
s Nasalis_larvatus.k141_153429                               7013 91 +     48152 AT-CTcc-ttcctagg-agtt-tcattagccag-g-g-aaa---at-taactcctc-at-atcac-ag----g--agagaa-gact-aagagtccac-------accaca-ccaagac---aga
i Nasalis_larvatus.k141_153429                          I 1255 C 0
s Nomascus_annamensis.k141_302224                             469 91 +      1516 AT-CTCC-TTCCTAGG-AGTG-TCATCAGCCAG-G-G-AAA---AT-TGACTCCTC-GT-ATCAC-AG----G--AGAGAA-GACT-AAGAGTCCAA-------ACCACA-CCAAGAC---AGA
i Nomascus_annamensis.k141_302224                       I 5 C 0
s Nomascus_concolor.k141_49591                               1590 91 +      2014 AT-CTCC-TTCCTAGG-AGTG-TCATCAGCCAG-G-G-AAA---AT-TGACTCCTC-GT-ATCAC-AG----G--AGAGAA-GACT-AAGAGTCCAA-------ACCACA-CCAAGAC---AGA
i Nomascus_concolor.k141_49591                          I 737 C 0
s Nomascus_gabriellae.k141_642452                             515 91 +      2851 AT-CTcc-ttcctagg-agtg-tcatcagccag-g-g-aaa---at-tgactcctt-gt-atcac-ag----g--agagaa-gact-aggggtccaa-------accaca-ccaagac---aga
i Nomascus_gabriellae.k141_642452                       I 5 C 0
s Nomascus_siki_b.tarseq_80                             23430 91 -  18771707 AT-CTcc-ttcctagg-agtg-tcatcagccag-g-g-aaa---at-tgactcctc-gt-atcac-ag----g--agagaa-gact-aagagtccaa-------accaca-ccaagac---aga
i Nomascus_siki_b.tarseq_80                         I 773 C 0
s Nomascus_siki_a.k141_595747                                  1143 91 +      4512 AT-CTcc-ttcctagg-agtg-tcatcagccag-g-g-aaa---at-tgactcctc-gt-atcac-ag----g--agagaa-gact-aagagttcaa-------accaca-ccaagac---aga
i Nomascus_siki_a.k141_595747                             I 737 C 0
s Nycticebus_bengalensis.LG16                            65565625 88 -  95554990 at-cccccttggaggg-agtt-tcatcaaccag-g-g-aat---at-tacctgttc-at-gtcgc-ag----g--agagga-ccct-agaagtctat-------gtgaca-ccc-------aga
i Nycticebus_bengalensis.LG16                           I 702 C 0
s Nycticebus_coucang.k141_2051882                            2354 88 +      6470 at-cccccttggaggg-agtt-tcatcaaccag-g-g-aat---at-tacctgttc-at-gtcgc-ag----g--agagga-ccct-agaagtctat-------gtgaca-ccc-------aga
i Nycticebus_coucang.k141_2051882                       I 586 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65667962 88 +  89412551 at-cccccttggaggg-agtt-tcatcaaccag-g-g-aat---at-taactgttc-at-atcac-ag----g--agagga-ccct-agaagtctat-------gtgaca-ccc-------aga
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     I 669 C 0
s Ochotona_princeps.JH802095.1                            4994507 65 -  23139505 ATCCCTT-TGTCT--G-AGTT-TTGTTAACCAC-T-G-AAG---AC-TGGGTG----CG-TTTAT-AG----A--AGAG-G---GC-ATAATTT------------------------------
i Ochotona_princeps.JH802095.1                          I 596 I 5
s Octodon_degus.JH651621.1                                3684106 37 +  10294119 ----------------------------------------G---AT-GAACTT----GT-ACCCT-AG--TGG--AGGGGG---CT-GGAAGTCA-----------------------------
i Octodon_degus.JH651621.1                              I 606 I 9
s Ondatra_zibethicus.OndZib_scaffold_6821                  123641 62 +    145789 at-cctt-tatccagg-gcct-ttatcgttcaa-g-g-aag---TT-TCCCTA----AT-A-----TG---AAAGT--------CT-AGATATCA-----------------------------
i Ondatra_zibethicus.OndZib_scaffold_6821               I 566 I 6
s Onychomys_torridus.OnyTor_scaffold_12578                  35393 62 +     62360 gt-cttt-tatcctga-ccct-ttatcattcaa-g-g-aag---tt-tgcctt----at-a-----gga---aagt--------ct-agatgcct-----------------------------
i Onychomys_torridus.OnyTor_scaffold_12578              I 562 I 7
s Oryctolagus_cuniculus.CM000803.1                      141874150 52 + 163896628 AC-CCTC-CCCCT--G-AGTT-TCATTAACCAG-G-G-AAG---AT--GGCTT----GT-ATCCT-AA----G--AGA----------------------------------------------
i Oryctolagus_cuniculus.CM000803.1                      I 554 I 10
s Otolemur_crassicaudatus.k141_321880                       37517 86 +     38679 at-cccc-tttcaggg-agtt--catcaaccag-g-g-aat---at-taactgttc-ac-atcac-ag----g--agagga-cact-cgaagtctac-------gtgaca-ccc-------aga
i Otolemur_crassicaudatus.k141_321880                   I 604 C 0
s Otolemur_garnettii.GL873528.1                          18006945 86 -  38779656 AT-CCCC-TTTCAGGG-AGTT--TATCAACCAG-G-G-AAT---AT-TAACTGTTC-AC-ATCAC-AG----G--AGAGGA-CACT-CGAAGTCTAC-------GTGACA-CCC-------AGA
i Otolemur_garnettii.GL873528.1                         I 590 C 0
s Pan_paniscus.CM003386.1                               127573152 91 - 205426864 AT-CTCC-TTCCTAGG-AGTT-TCATTAGCCAG-G-G-AAA---AT-TGACTCCTC-CT-ATCAC-AG----G--AGAGAA-GACT-AAGAGTCCAT-------ACCACA-CCAAGAC---AGA
i Pan_paniscus.CM003386.1                               I 743 C 0
s Pan_troglodytes.CM009241.2                            120150305 91 - 196562556 AT-CTCC-TTCCTAGG-AGTT-TCATTAGCCAG-G-G-AAA---AT-TGACTCCTC-CT-ATCAC-AG----G--AGAGAA-GACT-AAGAGTCCAT-------ACCACA-CCAAGAC---AGA
i Pan_troglodytes.CM009241.2                            I 743 C 0
s Papio_anubis.CM001492.2                               188154748 90 - 188283584 AT-CTCC-TTTCTAGG-AGTT-TCATCAGCCAG-G-G-AAA---AT-TAACTCCTC-AT-ATCAC-AG----G--AGAGAA-GACG-AAGAGTCCAT-------ACCACA-CCAAGAC---AG-
i Papio_anubis.CM001492.2                               I 1244 C 0
s Papio_cynocephalus.k141_883042                             3066 90 +      5367 AT-CTcc-tttctagg-agtt-tcatcagccag-g-g-aaa---at-taactcctc-at-atcac-ag----g--agagaa-gacg-aagagtccat-------accaca-ccaagac---ag-
i Papio_cynocephalus.k141_883042                        I 5 C 0
s Papio_hamadryas.Contig15                               47512137 90 +  47705337 AT-CTcc-tttctagg-agtt-tcatcagccag-g-g-aaa---at-taactcctc-at-atcac-ag----g--agagaa-gacg-aagagtccat-------accaca-ccaagac---ag-
i Papio_hamadryas.Contig15                              I 1236 C 0
s Papio_kindae.k141_5458022                                 66115 90 -    104429 AT-CTcc-tttctagg-agtt-tcatcagccag-g-g-aaa---at-taactcctc-at-atcac-ag----g--agagaa-gacg-aagagtccat-------accaca-ccaagac---ag-
i Papio_kindae.k141_5458022                             I 1237 C 0
s Papio_papio.k141_979496                                    4647 90 +     14967 AT-CTcc-tttctagg-agtt-tcatcagccag-g-g-aaa---at-taactcctc-at-atcac-ag----g--agagaa-gacg-aagagtccat-------accaca-ccaagac---ag-
i Papio_papio.k141_979496                               I 5 C 0
s Papio_ursinus.k141_1345919                                  508 90 -      7628 AT-CTcc-tttctagg-agtt-tcatcagccag-g-g-aaa---at-taactcctc-at-atcac-ag----g--agagaa-gacg-aagagtccat-------accaca-ccaagac---ag-
i Papio_ursinus.k141_1345919                            I 5 C 0
s Perodicticus_ibeanus.k141_117958                           3568 59 -     23713 tt-cccc-ttccaggg-agtt-tcatcaaccag-g-g-aat---at-taactgttc-at-atcac-ag----g--agag---------------------------------------------
i Perodicticus_ibeanus.k141_117958                      I 601 I 20
s Perodicticus_potto.k141_713187                            22866 59 -     27972 tt-cccc-ttccaggg-agtt-tcatcaaccag-g-g-aat---at-taactgttc-at-atcac-ag----g--agag---------------------------------------------
i Perodicticus_potto.k141_713187                        I 600 I 20
s Perognathus_longimembris.PerPac_flattened_line_22291      41717 70 -     45160 AT-CTTG-TACCCCAG-AGTT-TAATCAACCAA-G-A-AAG---AC-TAAAAT----AT-ATCACATG---AG--AAGAAA---CT-AAAAGCCA-----------------------------
i Perognathus_longimembris.PerPac_flattened_line_22291  I 834 I 6
s Peromyscus_maniculatus.KI615518.1                       4948585 62 -   8017169 AT-ATTT-TATCCAGG-CCCT-TTGTCATTCAA-G-G-AAG---TT-TGCCTT----AT-A-----GG---AAAGT--------CT-AGATGCCT-----------------------------
i Peromyscus_maniculatus.KI615518.1                     I 578 I 6
s Petromus_typicus.PetTyp_scaffold_33007                    10791 40 -     36578 ----------------------------------------ggagat-gaactt----gt-accac-agaa--g--agagga---ct-agcaatca-----------------------------
i Petromus_typicus.PetTyp_scaffold_33007                I 603 I 6
s Piliocolobus_badius.k141_1987485                            536 91 -      5908 AT-CTcc-ttcctagg-agtt-tcatcagccag-g-g-aaa---at-taactcctc-at-atcac-ag----g--agagaa-gact-aagagtccat-------accaca-ccaagac---aga
i Piliocolobus_badius.k141_1987485                      I 5 C 0
s Piliocolobus_gordonorum.k141_1270531                       1155 91 -     17985 AT-CTcc-ttcctagg-agtt-tcatcagccag-g-g-aaa---at-taactcctc-at-atcac-ag----g--agagaa-gact-aggagtccat-------accaca-ccaagac---aga
i Piliocolobus_gordonorum.k141_1270531                  I 5 C 0
s Piliocolobus_kirkii.k141_929665                             522 91 +      7694 AT-CTcc-ttcctagg-agtt-tcatcagccag-g-g-aaa---at-taactcctc-at-atcac-ag----g--agagaa-gact-aggagtccat-------accaca-ccaagac---aga
i Piliocolobus_kirkii.k141_929665                       I 5 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26739000 91 +  26888534 AT-CTCC-TTCCTAGG-AGTT-TCATCAGCCAG-G-G-AAA---AT-TAACTCCTC-AT-ATCAC-AG----G--AGAGAA-GACT-AAGAGTCCAT-------ACCACA-CCAAGAC---AGA
i Piliocolobus_tephrosceles.PDMG02000036.1              I 1572 C 0
s Pithecia_albicans.k141_991845                             42131 91 -     61926 AT-CTcc-ttcctagg-agtt-tcatcaacgag-g-g-aca---aa-taactcctt-at-atcac-ag----g--agagaa-cact-aggagtccat-------accaca-cccagac---aga
i Pithecia_albicans.k141_991845                         I 721 C 0
s Pithecia_chrysocephala.k141_159118                        23560 91 +     78826 AT-CTcc-ttcctagg-agtt-tcatcaacgag-g-g-aca---aa-taactcctt-at-atcac-ag----g--agagaa-cact-aggagtccat-------accaca-cccagac---aga
i Pithecia_chrysocephala.k141_159118                    I 721 C 0
s Pithecia_hirsuta.k141_1152968                              7511 91 -     15800 AT-CTcc-ttcctagg-agtt-tcatcaacgag-g-g-aca---aa-taactcctt-at-atcac-ag----g--agagaa-cact-aggagtccat-------accaca-cccagac---aga
i Pithecia_hirsuta.k141_1152968                         I 721 C 0
s Pithecia_mittermeieri.k141_2119203                        10709 91 -     16101 AT-CTcc-ttcctagg-agtt-tcatcaacgag-g-g-aca---aa-taactcctt-at-atcac-ag----g--agagaa-cact-aggagtccat-------accaca-cccagac---aga
i Pithecia_mittermeieri.k141_2119203                    I 721 C 0
s Pithecia_pissinattii.k141_1102319                          4018 91 +      9673 AT-CTcc-ttcctagg-agtt-tcatcaacgag-g-g-aca---aa-taactcctt-at-atcac-ag----g--agagaa-cact-aggagtccat-------accaca-cccagac---aga
i Pithecia_pissinattii.k141_1102319                     I 721 C 0
s Pithecia_pithecia.tarseq_313                           13473012 91 -  19735023 AT-CTCC-TTCCTAGG-AGTT-TCATCAACGAG-G-G-ACA---AA-TAACTCCTT-AT-ATCAC-AG----G--AGAGAA-CACT-AGGAGTCCAT-------ACCACA-CCCAGAC---AGA
i Pithecia_pithecia.tarseq_313                          I 721 C 0
s Pithecia_vanzolinii.k141_831006                           11920 91 -     31692 AT-CTcc-ttcctagg-agtt-tcatcaacgag-g-g-aca---aa-taactcctt-at-atcac-ag----g--agagaa-cact-aggagtccat-------accaca-cccagac---aga
i Pithecia_vanzolinii.k141_831006                       I 721 C 0
s Plecturocebus_bernhardi.k141_959214                       21354 91 +     44506 AT-CTCC-TTCCTAGG-AGTT-TCATCAACGAG-G-G-ACG---AA-TAACTCCTT-AT-ATCAC-AG----G--AGAGAA-CACTTAGTAGTCCAT-------ACCACA-TCCAGAT----GA
i Plecturocebus_bernhardi.k141_959214                   I 723 C 0
s Plecturocebus_brunneus.k141_498086                        21564 91 +     67491 AT-CTCC-TTCCTAGG-AGTT-TCATCAACGAG-G-G-ACG---AA-TAACTCCTT-AT-ATCAC-AG----G--AGGGAA-CACTTAGTAGTCCAT-------ACCACA-TCCAGAT----GA
i Plecturocebus_brunneus.k141_498086                    I 723 C 0
s Plecturocebus_caligatus.k141_2539816                      11805 91 -     98129 AT-CTcc-ttcctagg-agtt-tcatcaacgag-g-g-acg---aa-taactcctt-at-atcac-ag----g--agagaa-cacttagtagtccat-------accaca-tccagat----ga
i Plecturocebus_caligatus.k141_2539816                  I 723 C 0
s Plecturocebus_cinerascens.k141_744510                     21410 91 +    147771 AT-CTCC-TTCCTAGG-AGTT-TCATCAACGAG-G-G-ACG---AA-TAACTCCTT-AT-ATCAC-AG----G--AGAGAA-CACTTAGTAGTCCAT-------ACCACA-TCCAGAT----GA
i Plecturocebus_cinerascens.k141_744510                 I 723 C 0
s Plecturocebus_cupreus.k141_1223294                        21659 91 -     23762 AT-CTCC-TTCCTAGG-AGTT-TCATCAACGAG-G-G-ACG---AA-TAACTCCTT-AT-ATCAC-AG----G--AGAGAA-CACTTAGTAGTCCAT-------ACCACA-TCCAGAT----GA
i Plecturocebus_cupreus.k141_1223294                    I 722 C 0
s Plecturocebus_dubius.k141_3565563                          2126 91 -     55515 AT-CTcc-ttcctagg-agtt-tcatcaacgag-g-g-acg---aa-taactcctt-at-atcac-ag----g--agagaa-cacttagtagtccat-------accaca-tccagat----ga
i Plecturocebus_dubius.k141_3565563                     I 723 C 0
s Plecturocebus_grovesi.k141_242819                         21479 91 +    152463 AT-CTcc-ttcctagg-agtt-tcatcaacgag-g-g-acg---aa-taactcctt-at-atcac-ag----g--agagaa-cacttagtagtccat-------accaca-tccagat----ga
i Plecturocebus_grovesi.k141_242819                     I 723 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      8239 91 +      8943 AT-CTCC-TTCCTAGG-AGTT-TCATCAACGAG-G-G-ACG---AA-TAACTCCTT-AT-ATCAC-AG----G--AGAGAA-CACTTAGTAGTCCAT-------ACCACA-TCCAGAT----GA
i Plecturocebus_hoffmannsi.k141_1595076                 I 723 C 0
s Plecturocebus_miltoni.k141_841561                         11199 91 +    134592 AT-CTcc-ttcctagg-agtt-tcatcaacgag-g-g-acg---aa-taactcctt-at-atcac-ag----g--agagaa-cacttagtagtccat-------accaca-tccagat----ga
i Plecturocebus_miltoni.k141_841561                     I 723 C 0
s Plecturocebus_moloch.k141_890597                          21789 91 -     75465 AT-CTcc-ttcctagg-agtt-tcatcaacgag-g-g-acg---aa-taactcctt-at-atcac-ag----g--agagaa-cacttagtagtccat-------accaca-tccagat----ga
i Plecturocebus_moloch.k141_890597                      I 723 C 0
s Pongo_abelii.NDHI03003816.1                              185694 91 -    373494 AT-CTCC-TTCCTAGG-AGTT-TCATCAGCCAG-G-G-AAA---AT-TGACTCCTC-AT-ATCAC-AG----G--AGACAA-GACT-AAGAGTCCAT-------ACCACA-CCAAGAC---AGA
i Pongo_abelii.NDHI03003816.1                           I 741 C 0
s Pongo_pygmaeus.ctg62                                   19806342 91 +  19899266 AT-CTcc-ttcctagg-agtt-tcatcagccag-g-g-aaa---at-tgactcctc-at-atcac-ag----g--agacaa-gact-aagagtccat-------accaca-ccaagac---aga
i Pongo_pygmaeus.ctg62                                  I 1481 C 0
s Presbytis_comata.k141_672698                               4257 91 -     15069 AT-CTcc-ttcctagg-agtt-tcattagccag-g-g-aaa---at-taactcctc-at-atcac-ag----g--agagaa-gact-aagagtccac-------accaca-ccaagac---aga
i Presbytis_comata.k141_672698                          I 1261 C 0
s Presbytis_mitrata.k141_860013                              4391 91 +     14865 AT-CTcc-ttcctagg-agtt-tcattagccag-g-g-aaa---at-taactcctc-at-atcac-ag----g--agagaa-gact-aagagtccac-------accaca-ccaagac---aga
i Presbytis_mitrata.k141_860013                         I 1261 C 0
s Prolemur_simus.MPIZ01000048.1                           6847048 91 +  12164890 at-ccct-gtcccgga-agtt-tcattaaccag-g-g-aag---at-tAACTACTC-CT-ATCAC-AG----G--AAAAGA-CACT-AGAAGTCCAT-------ATGACA-CCCAGAC---AGA
i Prolemur_simus.MPIZ01000048.1                         I 710 C 0
s Propithecus_coquerelli.NW_012147997.1                    666257 91 -   2312742 ac-cccc-ttcccagg-agtt-tcatcaaccag-g-g-aag---at-taactactC-CT-ATCAC-Ag----g--aaagga-caCT-agaagtccac-------atgata-cccagac---aga
i Propithecus_coquerelli.NW_012147997.1                 I 1302 C 0
s Propithecus_coronatus.k141_1353159                         2087 91 +     11805 ac-cccc-ttcccagg-agtt-tcatcaaccag-g-g-aag---at-taactactc-ct-atcac-ag----g--aaagga-cact-agaagtccac-------atgata-cccagac---aga
i Propithecus_coronatus.k141_1353159                    I 605 C 0
s Propithecus_diadema.k141_577245                           41422 91 +     52369 ac-cccc-ttcccagg-agtt-tcatcaaccag-g-g-aag---at-taactactc-ct-atcaa-ag----g--aaagga-cact-agaagtctac-------atgata-cccagac---aga
i Propithecus_diadema.k141_577245                       I 606 C 0
s Propithecus_edwardsi.k141_1317105                         33811 91 -     44753 ac-cccc-ttcccagg-agtt-tcatcaaccag-g-g-aag---at-taactactc-ct-atcaa-ag----g--aaagga-cact-agaagtccac-------atgata-cccagac---aga
i Propithecus_edwardsi.k141_1317105                     I 606 C 0
s Propithecus_perrieri.k141_7554                            15732 91 +     27322 ac-cccc-ttcccagg-agtt-tcatcaaccag-g-g-aag---at-taactactc-ct-atcaa-ag----g--aaagga-cgct-agaagtccac-------atgata-cccagac---aga
i Propithecus_perrieri.k141_7554                        I 606 C 0
s Propithecus_tattersalli.k141_907138                       15371 91 -     53241 ac-cccc-ttcccagg-agtt-tcatcaaccag-g-g-aag---at-taactactc-ct-atcac-ag----a--aaagga-cact-agaagtccac-------atgata-cccagac---aga
i Propithecus_tattersalli.k141_907138                   I 606 C 0
s Propithecus_verreauxi.k141_158021                         37642 91 -     48185 ac-cccc-ttcccagg-agtt-tcatcagccag-g-g-aag---at-taactactc-ct-atcac-ag----g--aaagga-cact-agaagtccac-------atgata-cccagac---aga
i Propithecus_verreauxi.k141_158021                     I 605 C 0
s Psammomys_obesus.NESX01026517.1                           32003 27 +     77221 AT-CCTC-TCTCTAGG-GCCT-TTATCATTC---------------------------------------------------------------------------------------------
i Psammomys_obesus.NESX01026517.1                       I 564 I 25
s Pygathrix_cinerea.k141_374971                             28380 91 +     56732 AT-CTcc-ttcctagg-actt-tcattagccag-g-g-aaa---at-taactcctc-at-atcac-ag----g--agagaa-gact-aagagtccac-------accaca-ccaacac---agg
i Pygathrix_cinerea.k141_374971                         I 1255 C 0
s Pygathrix_nigripes_b.ctg79                                 6804871 91 +   6970761 AT-CTcc-ttcctagg-agtt-tcattagccag-g-g-aaa---at-taactcctc-at-atcac-ag----g--agagaa-gact-aagagtccac-------accaca-ccaacac---agg
i Pygathrix_nigripes_b.ctg79                               I 1255 C 0
s Pygathrix_nigripes_a.k141_101123                             4265 91 +     18040 AT-CTcc-ttcctagg-agtt-tcattagccag-g-g-aaa---at-taactcctc-at-atcac-ag----g--agagaa-gact-aagagtccac-------accaca-ccaacac---agg
i Pygathrix_nigripes_a.k141_101123                        I 1256 C 0
s Rattus_norvegicus.chr11                                13913938 27 +  90463843 GT-CCTC-TCTCCAGG-ACCA-TTATTATTC---------------------------------------------------------------------------------------------
i Rattus_norvegicus.chr11                               I 533 I 25
s Rhinopithecus_bieti.k119_1391695                            488 91 -      1866 AT-CTcc-ttcctagg-agtt-tcattagccag-g-g-aaa---at-taactcctc-at-atcac-ag----g--agagaa-gact-aagagtccac-------accaca-ccaagac---aga
i Rhinopithecus_bieti.k119_1391695                      I 5 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206376145 91 - 206558726 AT-CTCC-TTCCTAGG-AGTT-TCATTAGCCAG-G-G-AAA---AT-TAACTCCTC-AT-ATCAC-AG----G--AGAGAA-GACT-AAGAGTCCAC-------ACCACA-CCAAGAC---AGA
i Rhinopithecus_roxellana.NC_044549.1                   I 1257 C 0
s Rhinopithecus_strykeri.ctg4                            44855045 91 -  45163003 AT-CTcc-ttcctagg-agtt-tcattagccag-g-g-aaa---at-taactcctc-at-atcac-ag----g--agagaa-gact-aagagtccac-------accaca-ccaagac---aga
i Rhinopithecus_strykeri.ctg4                           I 1257 C 0
s Saimiri_boliviensis.NW_024100938.1                     15671229 91 -  43202129 AT-CTCC-TTCCTAGG-AGTT-TCATCAACCAG-G-G-AAA---AA-TAACTCCTT-AT-ATCAC-AG----G--AGAGAA-CACT-AGGAGTCCAT-------ACCACA-TCCAGAC---AGA
i Saimiri_boliviensis.NW_024100938.1                    I 703 C 0
s Saimiri_cassiquiarensis.k141_808270                        3146 91 +     34089 AT-CTCC-TTCCTAGG-AGTT-TCATCAACCAG-G-G-AAA---AA-TAACTCCTT-AT-ATCAC-AG----G--AGAGAA-CACT-AGGGGTCCAT-------ACCACA-TCCAGAC---AGA
i Saimiri_cassiquiarensis.k141_808270                   I 754 C 0
s Saimiri_macrodon.k141_2087127                              3087 91 -     60842 AT-CTCC-TTCCTAGG-AGTT-TCATCAACCAG-G-G-AAA---AA-TAACTCCCT-AT-ATCAC-AG----G--AGAGAA-CACT-AGGGGTCCAT-------ACCACA-TCCAGAC---AGA
i Saimiri_macrodon.k141_2087127                         I 754 C 0
s Saimiri_oerstedii.k141_841116                              3182 91 +     67014 AT-CTCC-TTCCTAGG-AGTT-TCATCAACCAG-G-G-AAA---AA-TAACTCCTT-AT-ATCAC-AG----G--AGAGAA-CACT-AGGGGTCCAT-------ACCACA-TCCAGAC---AGA
i Saimiri_oerstedii.k141_841116                         I 754 C 0
s Saimiri_sciureus.k141_1947592                              3160 91 +     60816 AT-CTCC-TTCCTAGG-AGTT-TCATCAACCAG-G-G-AAA---AA-TAACTCCCT-AT-ATCAC-AG----G--AGAGAA-CACT-AGGGGTCCAT-------ACCACA-TCCAGAC---AGA
i Saimiri_sciureus.k141_1947592                         I 754 C 0
s Saimiri_ustus.k141_1282476                                 3097 91 -     76454 AT-CTCC-TTCCTAGG-AGTT-TCATCAACCAG-G-G-AAA---AA-TAACTCCTT-AT-ATCAC-AG----G--AGAGAA-CACT-AGGGGTCCAT-------ACCACA-TCCAGAC---AGA
i Saimiri_ustus.k141_1282476                            I 754 C 0
s Sapajus_apella.ctg10                                   17339801 91 -  30362882 AT-ATCC-TTCCTAAG-AGTT-TCATCAACCAG-G-G-AAA---AA-TAACTCCTT-AT-ATCAC-AG----G--AGAGAA-CACT-AGGAGTCCAT-------ACCACA-TCCAGAC---AGA
i Sapajus_apella.ctg10                                  I 724 C 0
s Sapajus_macrocephalus.k141_966464                         19176 91 -     62485 AT-ATCC-TTCCTAGG-AGTT-TCATCAACCAG-G-G-AAA---AA-TAACTCCTT-AT-ATCAC-AG----G--AGAGAA-CACT-AGGAGTCCAT-------ACCACA-TCCAGAC---AGA
i Sapajus_macrocephalus.k141_966464                     I 724 C 0
s Semnopithecus_entellus.k141_1572367                        1873 90 +     15331 AT-CTCC-TTC-TAGG-AGTT-TCATTAGCCAG-G-G-AAA---AT-TAACTCCTC-AT-ATCAC-AG----G--AGAGAA-GATT-AAGAGTCCAC-------ACCACA-CCAAGAC---AGA
i Semnopithecus_entellus.k141_1572367                   I 5 C 0
s Semnopithecus_hypoleucos.k141_761524                       7269 91 +     20762 AT-CTcc-ttcctagg-agtt-tcattagccag-g-g-aaa---at-taactcctc-gt-atcac-ag----g--agagaa-gatt-aacagtccac-------accaca-ccaagac---aga
i Semnopithecus_hypoleucos.k141_761524                  I 1259 C 0
s Semnopithecus_johnii.k141_785014                         117267 91 +    130994 AT-CTcc-ttcctagg-agtt-tcattagccag-g-g-aaa---at-taactcctc-at-atcac-ag----g--agagaa-gatt-aagagtccac-------accaca-ccaagac---aga
i Semnopithecus_johnii.k141_785014                      I 5 C 0
s Semnopithecus_priam.k141_410937                           36058 91 +     46263 AT-CTcc-ttcctagg-agtt-tcattagccag-g-g-aaa---at-taactcctc-at-atcac-ag----g--agagaa-gatt-aacagtccac-------accaca-ccaagac---aga
i Semnopithecus_priam.k141_410937                       I 5 C 0
s Semnopithecus_schistaceus.k141_387461                     29173 90 +     42640 AT-CTCC-TT-CTAGG-AGTT-TCATTAGCCAG-G-G-AAA---AT-TAACTCCTC-AT-ATCAC-AG----G--AGAGAA-GATT-AAGAGTCCAC-------ACCACA-CCAAGAC---AGA
i Semnopithecus_schistaceus.k141_387461                 I 5 C 0
s Semnopithecus_vetulus.k141_1143185                        12221 91 +     30600 AT-CTcc-ttcctagg-agtt-tcattagccag-g-g-aaa---at-taactcctc-at-atcac-ag----g--agagaa-gatt-aagagtccac-------accaca-ccaagac---aga
i Semnopithecus_vetulus.k141_1143185                    I 5 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   98178 62 -    120886 gt-cctt-tatccaga-gcct-ttatcattcca-g-a-aag---tt-tacctc----at-a-----gga---aagc--------ct-agatgtca-----------------------------
i Sigmodon_hispidus.SigHis_scaffold_11332               I 550 I 6
s Spermophilus_dauricus.KZ294190.1                        2238440 66 +   2842873 AT-CCCT-CACCCAGG-AGCT-TCATGG-ACAG-G-G-AAA---AT-TAACAC----AT-GTCAT-T-----G--AAGAGT---TC-AGAAGTCA-----------------------------
i Spermophilus_dauricus.KZ294190.1                      I 574 I 6
s Symphalangus_syndactylus.tarseq_24                        13422 91 -  13920577 AT-CTcc-ttcctagg-agtg-tcatcagccag-g-g-aaa---at-tgactcctc-gt-atcac-ag----g--agagaa-gact-aagagtccaa-------accaca-ccaagac---aga
i Symphalangus_syndactylus.tarseq_24                    I 5 C 0
s Tarsius_lariang.k141_609102                               24995 91 +     42269 at-cctc-tccccagg-aatt-ttatcagccag-g-a-aaa---at-taactcctc-at-atcac-ag----g--aaagaa-gact-agaagtttac-------accaca-cccagac---aga
i Tarsius_lariang.k141_609102                           I 585 C 0
s Tarsius_wallacei.k141_48636                               58311 91 +     65473 at-cctc-tccccagg-aatt-ttatcaaccag-g-a-aaa---at-taactcctc-at-atcac-ag----g--aaagaa-gact-agaagtttat-------accaca-cccagac---aga
i Tarsius_wallacei.k141_48636                           I 585 C 0
s Theropithecus_gelada.CM009951.1                       194006276 90 - 194193292 AT-CTCC-TTTCTAGG-AGTT-TCATCAGCCAA-G-G-AAA---AT-TAACTCCTC-AT-ATCAC-AG----G--AGAGAA-GACG-AAGAGTGCAT-------ACCACA-CCAAGAC---AG-
i Theropithecus_gelada.CM009951.1                       I 1236 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             37839 40 -     47444 ----------------------------------------gaagat-gaactt----at-accac-agaa--g--aggaga---gt-agaagtca-----------------------------
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         I 594 I 6
s Trachypithecus_auratus.k141_738098                        25379 91 +     38948 AT-CTcc-ttcctagg-agtt-tcattagccag-g-g-aaa---at-taactcctc-at-atcac-ag----g--agagaa-gatt-aagagtccac-------accaca-ccaagac---aga
i Trachypithecus_auratus.k141_738098                    I 1259 C 0
s Trachypithecus_crepusculus.k141_1588528                   19106 91 -     32910 AT-CTcc-ttcctagg-agtt-tcattagccag-g-g-aaa---at-taactcctc-at-atcac-ag----g--agagaa-gatt-aagagtccac-------accaca-ccaagac---aga
i Trachypithecus_crepusculus.k141_1588528               I 1259 C 0
s Trachypithecus_cristatus.k141_1011511                       493 91 -     12939 AT-CTcc-ttcctagg-agtt-tcattagccag-g-g-aaa---at-taactcctc-at-atcac-ag----g--agagaa-gatt-aagagtccac-------accaca-ccaagac---aga
i Trachypithecus_cristatus.k141_1011511                 I 5 C 0
s Trachypithecus_francoisi.k141_768164                        433 91 -     14244 AT-CTcc-ttcctagg-agtt-tcattagccag-g-g-aaa---at-taactcctc-at-atcac-ag----g--agagaa-gatt-aagagtccac-------accaca-ccaagac---aga
i Trachypithecus_francoisi.k141_768164                  I 5 C 0
s Trachypithecus_geei.k141_670367                           41826 91 -     54611 AT-CTcc-ttcctagg-agtt-tcattagccag-g-g-aaa---at-taactcctc-at-atcac-ag----g--agagaa-gatt-aagagtccac-------accaca-ccaagac---aga
i Trachypithecus_geei.k141_670367                       I 1257 C 0
s Trachypithecus_germaini.k141_878600                         656 91 +      1165 AT-CTcc-ttcctagg-agtt-tcattagccag-g-g-aaa---at-taactcctc-at-atcac-ag----g--agagaa-gatt-aagagtccac-------accaca-ccaagac---aga
i Trachypithecus_germaini.k141_878600                   I 5 C 0
s Trachypithecus_hatinhensis.k141_504423                     1804 91 -     15592 AT-CTcc-ttcctagg-agtt-tcattagccag-g-g-aaa---at-taactcctc-at-atcac-ag----g--agagaa-gatt-aagagtccac-------accaca-ccaagac---aga
i Trachypithecus_hatinhensis.k141_504423                I 5 C 0
s Trachypithecus_laotum.k141_760702                           461 91 +     14371 AT-CTcc-ttcctagg-agtt-tcattagccag-g-g-aaa---at-taactcctc-at-atcac-ag----g--agagaa-gatt-aagagtccac-------accaca-ccaagac---aga
i Trachypithecus_laotum.k141_760702                     I 5 C 0
s Trachypithecus_leucocephalus.k141_283605                  50218 91 +     51589 AT-CTcc-ttcctagg-agtt-tcattagccag-g-g-aaa---at-taactcctc-at-atcac-ag----g--agagaa-gatt-aagagtccac-------accaca-ccaagac---aga
i Trachypithecus_leucocephalus.k141_283605              I 1259 C 0
s Trachypithecus_melamera.k141_238507                       13394 91 +     14732 AT-CTcc-ttcctagg-agtt-tcattagccag-g-g-aaa---at-taactcctc-at-atcac-ag----g--agagaa-gatt-aagagtccac-------accaca-ccaagac---aga
i Trachypithecus_melamera.k141_238507                   I 1259 C 0
s Trachypithecus_obscurus.k141_1115109                       3871 91 -     28054 AT-CTcc-ttcctagg-agtt-tcattagccag-g-g-aaa---at-taactcctc-at-atcac-ag----g--agagaa-gatt-aagagtccac-------accaca-ccaagac---aga
i Trachypithecus_obscurus.k141_1115109                  I 1259 C 0
s Trachypithecus_phayrei.ctg3                            44658666 91 -  44834318 AT-CTcc-ttcctagg-agtt-tcattagccag-g-g-aaa---at-taactcctc-at-atcac-ag----g--agagaa-gatt-aagagtccac-------accaca-ccaagac---aga
i Trachypithecus_phayrei.ctg3                           I 1259 C 0
s Trachypithecus_pileatus.k141_1022309                        969 91 +     13828 AT-CTcc-ttcctagg-agtt-tcattagccag-g-g-aaa---at-taactcctc-at-atcac-ag----g--agagaa-gatt-aagagtccac-------accaca-ccaagac---aga
i Trachypithecus_pileatus.k141_1022309                  I 5 C 0
s Tupaia_chinensis.KB320831.1                             2791162 77 -   3938065 AT-CATC-TA--TGGA-AATC-TCATCAACCAG-G-G-AAG---AT-TAACTG----GC-ATCAC-AG----G--AGATGA--G---AGAAGTGGAC-------CTCACAACCC----------
i Tupaia_chinensis.KB320831.1                           I 1079 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    3422 76 +     13056 at-catc-ta--tgga-tagc-tcatcaaccag-g-g-aag---gt-gaacca----gc-atcac-ag----g--agatga--g---agaagtggac-------ctcaca-ccc----------
i Tupaia_tana.TupTan_flattened_line_68454               I 819 C 0
s Varecia_rubra.k141_432109                                  3779 63 -     20643 at-ctcc-ttctcaga-agtt-tcatcaaccag-a-g-aag---at-taactactc-ct-atcac-ag----g--aaagga-ca----------------------------------------
i Varecia_rubra.k141_432109                             I 600 I 2
s Varecia_variegata.k141_775891                             23321 63 -     33872 at-ctcc-ttctcaga-agtt-tcatcaaccag-a-g-aag---at-taactactc-ct-atcac-ag----g--aaagga-ca----------------------------------------
i Varecia_variegata.k141_775891                         I 598 I 2
s Xerus_inauris.XerIna_scaffold_7898                       125541 67 -    134049 at-ccct-tactcagg-agct-tccttaaacag-g-g-aag---at-tagctc----at-atcat-t-----g--gagagt---tt-agaagtca-----------------------------
i Xerus_inauris.XerIna_scaffold_7898                    I 577 I 6
s Zapus_hudsonius.ZapHud_scaffold_64392                     13770 43 -     20485 at-atct-gacccagg-agct-tca----ggag-g-g-aaa---tt-taattc----ac-t-----gg--------------------------------------------------------
i Zapus_hudsonius.ZapHud_scaffold_64392                 I 569 I 21
e Eptesicus_fuscus.JH977687.1                             4702143 415 +   6522550 I
e Macroglossus_sobrinus.MacSob_scaffold_879                699974 431 +    802869 I
e Sorex_araneus.JH798170.1                               17748590 843 -  27805282 I
e Erinaceus_europaeus.JH835290.1                         11530833 462 +  16010500 I
e Chaetophractus_vellerosus.ChaVel_scaffold_1070855          1230  0 -      1715 I
e Suricata_suricatta.SurSur_flattened_line_20339            25319 430 +     62062 I
e Ziphius_cavirostris.ZipCav_flattened_line_127025           5301 442 -      8775 I
e Zalophus_californianus.ZalCal_flattened_line_4097        212018 448 -    227762 I
e Vulpes_lagopus.VulLag_flattened_line_2045                135489 449 -    281493 I
e Vicugna_pacos.KN269600.1                                1523037 433 -   2331223 I
e Ursus_maritimus.KK498671.1                              6512543 460 +  28682327 I
e Uropsilus_gracilis.UroGra_scaffold_4143_0                 24925  0 -     25548 I
e Tursiops_truncatus.MRVK01000923.1                      69311805 441 -  96451834 I
e Trichechus_manatus.JH594618.1                          16079679 1700 +  31416278 I
e Tragulus_javanicus.TraJav_scaffold_14717                   3584 419 +     90398 I
e Tonatia_saurophila.TonSau_scaffold_3334                  134241 421 -    259118 I
e Tolypeutes_matacus.TolMat_scaffold_269431                  1990 2406 +      6782 I
e Tapirus_terrestris.TapTer_scaffold_14939                  55756 434 +     99546 I
e Tapirus_indicus.TapInd_scaffold_176                      805095 435 +   1148477 I
e Tamandua_tetradactyla.TamTet_scaffold_26877               13106 433 +     45698 I
e Tadarida_brasiliensis.TadBra_scaffold_145589               4174 407 -      6213 I
e Sus_scrofa.CM000824.4                                 189270228 447 + 218635234 I
e Spilogale_gracilis.SpiGra_flattened_line_905             232751 445 -    276980 I
e Solenodon_paradoxus.SolPar_flattened_line_1012            16376 416 +    739146 I
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   29737 434 -    114521 I
e Saiga_tatarica.SaiTat_scaffold_82192                       5983 428 +     12214 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                17647 435 +    109198 I
e Rhinolophus_sinicus.LVEH01000179.1                      1786172 430 +   2252614 I
e Rangifer_tarandus.RanTarSib_scaffold_24239                14178 431 +     68503 I
e Puma_concolor.QAVW01000427.1                          131532079 431 - 161321710 I
e Pteropus_vampyrus.KN525959.1                             602305 437 -   3946241 I
e Pteropus_alecto.KB031157.1                             13244354 438 -  17261082 I
e Pteronura_brasiliensis.PteBra_flattened_line_1343        243991 454 -    344369 I
e Pteronotus_parnellii.KE867983.1                            2230 422 -     27784 I
e Procavia_capensis.ProCapCap_scaffold_15315                74302 1939 +     78963 I
e Platanista_gangetica.PlaMin_flattened_line_72990           3771 443 +     21690 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            95224 410 +    112873 I
e Phocoena_phocoena.PhoPho_flattened_line_11948            119703 443 -    122454 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113416 447 -    135482 I
e Pantholops_hodgsonii.KE114631.1                         1064538 417 -   1292953 I
e Panthera_tigris.KE721879.1                              5025497 431 -   6340057 I
e Panthera_pardus.KV860323.1                              3635849 432 +  18214204 I
e Panthera_onca.PanOnc_flattened_line_1615                  32116 431 +    295523 I
e Ovis_canadensis.OviCan_scaffold_6251                      76891 417 +    140051 I
e Ovis_aries.CM001582.2                                 134075677 417 - 275406953 I
e Otocyon_megalotis.JAEUCK010005121.1                      305421 444 -    505867 I
e Orycteropus_afer.OryAfe_flattened_line_13509              41471 1764 -     66828 I
e Orcinus_orca.KB316965.1                                 7223086 443 -   7562323 I
e Okapia_johnstoni.LVCL01S0017931.1                         35255 573 +     78940 I
e Odocoileus_virginianus.KZ101650.1                       1078100 432 +   1425656 I
e Odobenus_rosmarus.KB229369.1                             677288 443 -   3126709 I
e Nyctereutes_procyonoides.CAJHUB010000786.1                28082 449 +   3668941 I
e Noctilio_leporinus.NocLep_scaffold_12062                  47676 415 +     94413 I
e Neophocaena_asiaeorientalis.KZ688543.1                  3949402 443 -   4490290 I
e Neomonachus_schauinslandi.NINY01007774.1                4482632 454 -  14209539 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3432 432 -      8794 I
e Myotis_myotis.MyoMyo_scaffold_6123                         8554 416 +     66751 I
e Myotis_lucifugus.GL429887.1                             3463359 417 -   3747815 I
e Myotis_davidii.KB114863.1                               5017463 416 +   6462685 I
e Myotis_brandtii.KE161952.1                               965772 418 +   8389877 I
e Mustela_putorius.JH417978.1                             4421898 453 -  28371801 I
e Murina_feae.MurFea_scaffold_2254                          17451 414 -    100666 I
e Mungos_mungo.MunMun_flattened_line_8729                  142653 430 -    168139 I
e Moschus_moschiferus.MosMos_scaffold_146101                 2972 432 -      4346 I
e Mormoops_blainvillei.MorMeg_scaffold_2952                159560 424 +    265003 I
e Monodon_monoceros.MonMon_M_scaffold_5598                 144790 442 +    154973 I
e Mirounga_angustirostris.MirAng_flattened_line_8852         9033 661 -    104932 I
e Miniopterus_schreibersii.MinSch_scaffold_24116            32480 421 +     45743 I
e Miniopterus_natalensis.LDJU01000022.1                   8207809 420 +  10048721 I
e Micronycteris_hirsuta.MicHir_scaffold_37978               21050 428 -     32043 I
e Microgale_talazaci.MicTal_scaffold_34660                  29351 1133 -     48017 I
e Mellivora_capensis.MelCap_flattened_line_146202             327 452 -      1999 I
e Megaderma_lyra.MegLyr_scaffold_3562                       62628 576 -    234502 I
e Manis_pentadactyla.KN017078.1                             34538 441 +     58827 I
e Manis_javanica.JSZB01003966.1                            144466 438 +    252755 I
e Lycaon_pictus.CM007556.1                               11085089 449 +  39895028 I
e Loxodonta_africana.GL010040.1                          20589215 1702 -  62548349 I
e Lipotes_vexillifer.KE558548.1                            134353 444 +   3060487 I
e Leptonychotes_weddellii.KB714749.1                      3083728 458 -   3498232 I
e Lasiurus_borealis.LasBor_scaffold_5102                   111937 417 -    115756 I
e Kogia_breviceps.KogBre_flattened_line_35920               22021 443 +     37189 I
e Inia_geoffrensis.IniGeo_flattened_line_66725               7195 437 +     17520 I
e Hyaena_hyaena.HyaHya_flattened_line_20729                 14013 474 -     67322 I
e Hipposideros_galeritus.HipGal_scaffold_104691              5946 409 -      9143 I
e Hipposideros_armiger.JXIK01001085.1                      276788 408 -    477199 I
e Hippopotamus_amphibius.HipAmp_scaffold_1308              145449 430 +    277961 I
e Heterohyrax_brucei.HetBruBak_scaffold_25354               54438 1939 +     73687 I
e Hemitragus_hylocrius.HemHyl_scaffold_16669                25884 416 -     91191 I
e Helogale_parvula.HelPar_flattened_line_22962              14960 432 +     53719 I
e Giraffa_tippelskirchi.LVKQ01S012154.1                    179385 717 -    189561 I
e Felis_nigripes.FelNig_flattened_line_8080                 18925 427 +     52776 I
e Felis_catus_fca126.CM031420.1                         129277790 427 - 158578461 I
e Eubalaena_japonica.EubJap_flattened_line_7756             59838 466 +     89355 I
e Eschrichtius_robustus.EscRob_flattened_line_685          313408 442 +    330699 I
e Equus_przewalskii.ATBW01073585.1                          11036 704 +     92910 I
e Equus_caballus.CM000402.2                              13349546 704 +  41866177 I
e Equus_asinus.JREZ01000062.1                             5851044 703 -   7175178 I
e Enhydra_lutris.KZ291749.1                              85869516 453 +  99434291 I
e Elephantulus_edwardii.JH947210.1                        7804622 10712 +  15467074 I
e Elaphurus_davidianus.JRFZ01086400.1                     1489870 432 +   1727528 I
e Eidolon_helvum.KE772537.1                                 10556 435 +     24177 I
e Echinops_telfairi.JH980316.1                           22994071  0 -  44670279 C
e Diceros_bicornis.DicBicMic_scaffold_9545                    953 1024 +    151128 I
e Dicerorhinus_sumatrensis.PEKH010003161.1                 320309 1016 +    993696 I
e Desmodus_rotundus.KZ672188.1                           18697183 419 -  18957592 I
e Delphinapterus_leucas.KZ290064.1                       80035206 438 -  96802777 I
e Dasypus_novemcinctus.JH568778.1                          180040 2424 -   6883506 I
e Cryptoprocta_ferox.CryFer_flattened_line_19014            49751 433 -     70449 I
e Crocidura_indochinensis.CroInd_scaffold_38409             18067 408 -     19186 I
e Craseonycteris_thonglongyai.CraTho_scaffold_22679         37588 826 -     40477 I
e Condylura_cristata.JH655880.1                          60611131 297 +  78930452 I
e Choloepus_hoffmanni.KN194586.1                           760141 439 +    964067 I
e Choloepus_didactylus.ChoDid_scaffold_36182                14830 439 -     21363 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_160623         1406 1024 -      9338 I
e Catagonus_wagneri.CatWag_scaffold_1305                   157166 412 -    276539 I
e Carollia_perspicillata.CarPer_scaffold_4436               57873 420 +     67245 I
e Capra_hircus.CM004562.1                               135704839 417 - 157403528 I
e Capra_aegagrus.CM003214.1                              21323612 417 + 157394656 I
e Canis_lupus_orion.HG994411.1                           16452657 449 -  44759192 I
e Canis_lupus_familiaris.chr31                           11085633 449 +  39895921 I
e Canis_lupus_dingo.QKWQ01001993.1                       11263104 449 -  35597290 I
e Canis_lupus_VD.CanFam_VD_scaffold_16982                   11461 449 +     87036 I
e CanFam4.chr31                                          11516443 449 +  39901454 I
e Camelus_ferus.KB016973.1                                2971365 436 +   6889770 I
e Camelus_dromedarius.KN271192.1                           395631 437 -  15254737 I
e Camelus_bactrianus.KN276303.1                           3217927 436 -   8989139 I
e Bubalus_bubalis.KI419065.1                              1229342 431 -   1914593 I
e Bos_taurus.CM000177.6                                 136293586 432 - 158972876 I
e Bos_mutus.JH883513.1                                     570227 432 -    998990 I
e Bos_indicus.CM003021.1                                138137853 432 - 161108492 I
e Bison_bison.KN264915.1                                  6557614 432 +   6870073 I
e Beatragus_hunteri.BeaHun_scaffold_21644                   41603 412 -     72089 I
e Balaenoptera_bonaerensis.DF502048.1                        3753 444 -     13118 I
e Balaenoptera_acutorostrata.KI537095.1                  26378522 443 +  51448160 I
e Artibeus_jamaicensis.ArtJam_scaffold_41619                 7075 421 -     29036 I
e Antilocapra_americana.AntAmePen_scaffold_42841            29107 427 +     33004 I
e Anoura_caudifer.AnoCau_scaffold_422                      388679 416 -    631301 I
e Ammotragus_lervia.NIVO01013474.1                        3518508 445 +   4113121 I
e Ailurus_fulgens.LNAC01000003.1                          7091784 657 -  16596857 I
e Ailuropoda_melanoleuca.LNAT01000321.1                  10655057 459 +  23371972 I
e Acinonyx_jubatus.LLWD01000356.1                         2031739 430 +   3721120 I
e Hylobates_pileatus_a.tarseq_592                             30921 2351 -     60944 I
e Hylobates_pileatus_b.ContigUN                                 14622428 998 -  25970782 I
e Hylobates_muelleri.k141_1133650                            2317  0 -      2775 I
e Hylobates_klossii.k141_466549                              9327 960 +     11537 I
e Hylobates_agilis.k141_1485652                              1303  0 -      1697 I
e Hylobates_abbotti.k141_493872                              2882 965 +      5897 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               10500 5 +    209709 C-T---GCC
s Acomys_cahirinus.AcoCah_scaffold_1625                    111050 6 -    189883 --A-TTGTC
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 25 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   11514 6 -     22067 --at-ggtc
i Allactaga_bullata.AllBul_scaffold_70162               I 4 I 16
s Allenopithecus_nigroviridis.k141_3103728                   1108 4 +      1665 --t---gtc
i Allenopithecus_nigroviridis.k141_3103728              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                          594 4 -     29318 --t---gtc
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_21674                            811 4 -      1421 --t---gtc
i Allochrocebus_preussi.k141_21674                      C 0 C 0
s Allochrocebus_solatus.k141_371672                           488 4 -     80423 --t---gtc
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             8766 5 -     18050 c-t---gtc
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  9879 5 -     11521 C-T---GTC
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              9443 5 -     21359 c-t---gtc
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_298055                                  734 5 +      1823 C-T---GTC
i Alouatta_juara.k141_298055                            C 0 C 0
s Alouatta_macconnelli.k141_1331706                          8734 5 -     10438 c-t---gtc
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            5390 5 +      7047 c-t---gtc
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             8675 5 +     10410 c-t---gtc
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            2480 5 -      4927 C-T---GTC
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             5409 5 +      6429 C-T---GTC
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Aotus_azarae.k141_3170768                                 61133 5 +     78111 c-t---gtc
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            4074 5 +     22701 c-t---gtc
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5748031 5 +   9889416 C-T---GTC
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             4616 5 -    104377 c-t---gtc
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               4622 5 +     23246 c-t---gtc
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     2447 3 +      5067 ------atc
i Aplodontia_rufa.AprRuf_scaffold_156013                I 7 C 0
s Arctocebus_calabarensis.k141_1161114                      16420 7 +     17483 C-T-GTGTC
i Arctocebus_calabarensis.k141_1161114                  I 20 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9537866 5 +  39197703 C-T---GTC
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             59150 5 +     85812 C-T---GTC
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                10149 5 +     89302 C-T---GTC
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             14654 5 -     58268 c-t---gtc
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             62645 5 +    119057 C-T---GTC
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               4614 5 -     25888 c-t---gtc
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 5252 7 -     16375 c-tat-gtc
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              1571 7 +      2719 c-tat-gtc
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Cacajao_ayresi.k141_724503                               112508 5 -    171031 c-t---gtc
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 11534 5 +    125063 c-t---gtc
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                13582 5 -    216513 c-t---gtc
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        6122 5 -    134917 c-t---gtc
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Capromys_pilorides.CapPil_scaffold_979108                   551 5 -      1248 --T--TGTC
i Capromys_pilorides.CapPil_scaffold_979108             I 9 I 39
s Carlito_syrichta.NW_007248099.1                          307602 7 +    345090 cttt--gtc
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   29034 6 +     33760 --ttt-gtc
i Castor_canadensis.CasCan_scaffold_47037               I 6 C 0
s Cavia_aperea.AVPZ01000278.1                            15785190 6 -  24422027 --T-TTGTC
i Cavia_aperea.AVPZ01000278.1                           I 9 C 0
s Cavia_porcellus.DS562889.1                             15797124 6 -  24440124 --T-TTGTC
i Cavia_porcellus.DS562889.1                            I 9 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       175315 6 +    436027 --ttt-gtc
i Cavia_tschudii.CavTsc_scaffold_488                    I 9 C 0
s Cebus_albifrons.Contig22                               18889365 5 -  29618158 c-t---gtc
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 6909 5 -     26817 c-t---gtc
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                11149 5 +     25043 c-t---gtc
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         6635 7 +     21754 cttt--gtc
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6553800 4 +   6739814 --T---GTC
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      25277 4 +     60454 --t---gtc
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                           482 4 -     21101 --t---gtc
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         57792 4 -    107033 --t---gtc
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                         693 4 -     17608 --t---gtc
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          28191 4 +     30494 --t---gtc
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          57034 4 -     59240 --t---gtc
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                           735 4 +     16677 --t---gtc
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           22893 4 +     35983 --t---gtc
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11989424 4 +  12117833 --t---gtc
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46476179 4 +  46592721 --t---gtc
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      39730 4 -     45581 --t---gtc
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                        739 4 +     35577 --t---gtc
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                         512 4 -     25661 --t---gtc
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                         490 4 -     17744 --t---gtc
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        20099 4 +     37128 --t---gtc
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           57555 7 -     68416 c-tat-gtc
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            6598 7 +     13308 c-tat-gtc
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             4158 5 -     18223 c-t---gtc
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             21181 5 +     25473 c-t---gtc
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           40217 4 +     57117 --T---GTC
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          44895 5 +     54541 c-t---gtc
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15960342 3 +  43084221 ------gtc
i Chinchilla_lanigera.JH721867.1                        I 12 C 0
s Chiropotes_israelita.k141_1189915                         69717 5 +    196370 c-t---gtc
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          13897 5 +     40510 c-t---gtc
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15137654 4 -  15256731 --t---gtc
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      32701 4 -     53260 --t---gtc
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101143264 4 + 101219884 --T---GTC
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10885021 5 +  10971483 C-T---GTC
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147663185 5 + 156195979 c-t---gtc
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            15169 5 +     23629 c-t---gtc
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 276939 6 -    399297 --T-TTTTC
i Cricetomys_gambianus.CriGam_scaffold_949              I 6 I 5
s Cricetulus_griseus.LT883672.1                          53027585 6 +  72327488 --C-TTGTC
i Cricetulus_griseus.LT883672.1                         I 6 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  206758 6 -    956709 --cat-gtc
i Ctenodactylus_gundi.CteGun_scaffold_447               I 6 I 14
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 29312 5 -     67205 --T--TGTC
i Ctenomys_sociabilis.CteSoc_scaffold_19489             I 9 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                16345 6 +     26546 --ttt-gtc
i Cuniculus_paca.CunPac_flattened_line_16637            I 9 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             57443 6 -    236241 --ttt-gtc
i Dasyprocta_punctata.DasPun_flattened_line_634         I 9 C 0
s Daubentonia_madagascariensis.ctg11                     16843413 7 +  31942871 c-tat-gtt
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   156232 3 +    228994 ------gtc
i Dinomys_branickii.DinBra_scaffold_1996                I 10 C 0
s Dipodomys_ordii.KN672545.1                              3654161 5 +   4240102 --tt--tta
i Dipodomys_ordii.KN672545.1                            I 6 I 436
s Dipodomys_stephensi.DipSte_scaffold_44365                 25804 6 +     28912 --ttt-tta
i Dipodomys_stephensi.DipSte_scaffold_44365             I 6 I 430
s Dolichotis_patagonum.DolPat_scaffold_14102                34693 6 -     73477 --ttt-gtc
i Dolichotis_patagonum.DolPat_scaffold_14102            I 9 C 0
s Ellobius_lutescens.LOEQ01003611.1                        238238 6 -    369425 --T-TTGTC
i Ellobius_lutescens.LOEQ01003611.1                     I 6 C 0
s Ellobius_talpinus.LOJH01090055.1                           5254 6 -      7838 --T-TTGTC
i Ellobius_talpinus.LOJH01090055.1                      I 6 C 0
s Erythrocebus_patas.Contig8                             48769834 4 -  48907691 --t---gtc
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eulemur_albifrons.k141_715837                              3598 7 +     13586 c-tat-gtc
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               3533 7 -      6809 c-tat-gtc
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            10008 7 +     36558 c-tat-gtc
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             6324 7 +     60246 c-tat-ggc
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 9806 7 +    109717 c-tat-gtc
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               14186 7 +     16540 c-tat-ggc
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                14461 7 +     27497 c-tat-gtc
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           16918 7 +     26808 c-tat-gtc
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                31651 7 +     46535 c-tat-gtc
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              14374 7 -     29447 c-tat-gtc
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Fukomys_damarensis.KN123630.1                          13891295 4 -  19261668 --T--C-TC
i Fukomys_damarensis.KN123630.1                         I 6 C 0
s Galago_moholi.ctg555                                     209509 7 -    847004 c-tat-ctc
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           11888 7 -     43889 c-tat-ctc
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           8957 7 +     27357 c-tat-gtc
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               154857 6 +    324696 --ttt-gtc
i Galeopterus_variegatus.GalVar_scaffold_354            I 2 C 0
s Glis_glis.GliGli_scaffold_79770                           11242 6 -     18683 --ttt-atc
i Glis_glis.GliGli_scaffold_79770                       I 6 C 0
s Gorilla_beringei.k141_111300                               3900 5 -     14630 c-t---gtc
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119650999 5 - 195582420 c-t---gtc
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   75983 6 +    118900 --ttt-atc
i Graphiurus_murinus.GraMur_scaffold_4493               I 6 C 0
s Hapalemur_alaotrensis.k141_1280836                          423 7 +     10286 c-tat-gtc
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_1254239                            8573 7 +      9690 c-tat-gtc
i Hapalemur_gilberti.k141_1254239                       C 0 C 0
s Hapalemur_griseus.k141_1387522                             4202 7 +     56096 c-tat-gtc
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        27478 7 -     42470 c-tat-gtc
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        44076 7 -     54384 c-tat-gtc
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2549685 6 +  31725842 --ttt-gtc
i Heterocephalus_glaber.JH602058.1                      I 6 C 0
s Hoolock_leuconedys.ctg903                                     5027 5 -     61166 c-t---gtc
i Hoolock_leuconedys.ctg903                                I 4 I 41
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           17594 6 -    119109 --ttt-gtc
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       I 9 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     4736 6 +     22540 --gtt-gac
i Hystrix_cristata.HysCri_scaffold_50788                I 6 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7124596 6 +  13083262 --T-TTATC
i Ictidomys_tridecemlineatus.JH393315.1                 I 6 C 0
s Indri_indri.k141_1884019                                   1845 7 -      2196 c-tat-gtc
i Indri_indri.k141_1884019                              C 0 C 0
s Jaculus_jaculus.JH725517.1                              8564261 6 +  11848649 --A-TGGTC
i Jaculus_jaculus.JH725517.1                            I 4 I 16
s Lagothrix_lagothricha.k141_12968                          48735 5 -    147782 c-t---gtc
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lemur_catta.scaffold_1                                258405758 7 - 285822530 c-tgt-gtc
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        22528 7 +     39228 c-t-acgtc
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            51903 7 +     63517 c-t-acgtc
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        77146 7 +    116806 c-t-acgtc
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     30167 7 -     33031 c-t-acgtc
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    11572 6 +     22452 --att-ggc
i Lepus_americanus.LepAme_scaffold_62849                I 10 C 0
s Lophocebus_aterrimus.ctg55                             19246889 4 +  19376315 --t---gtc
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            9271 7 +     84689 c-tgt-gtc
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3777020 7 +   6799190 c-tgt-gtc
i Loris_tardigradus.ctg97                               C 0 C 0
s Macaca_arctoides.k141_2201161                             18578 4 +     74745 --t---gtc
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12705095 4 +  12821369 --t---gtc
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                 740 4 -      3136 --t---gtc
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           45491 4 +     63263 --t---gtc
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                  257 4 -      2568 --t---gtc
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                  765 4 -      7381 --t---gtc
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  44002 4 -     79256 --t---gtc
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196034172 4 + 196197964 --T---GTC
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11444277 4 +  11645122 --T---GTC
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   2949 4 -     46448 --t---gtc
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                 621 4 -     13212 --t---gtc
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 14363 4 -     55006 --t---gtc
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43839400 4 +  43892939 --t---gtc
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               15650 4 -     24607 --t---gtc
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               2954 4 -     27140 --t---gtc
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43436048 4 -  43563597 --t---gtc
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4448874 4 -   4543643 --t---gtc
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36872431 6 +  64221397 --T-TTATC
i Marmota_marmota.CZRN01000005.1                        I 6 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               10505 6 +     15977 --T-TTGTC
i Meriones_unguiculatus.MerUng_scaffold_52233           I 25 C 0
s Mesocricetus_auratus.KB708139.1                         1045323 6 -  26018355 --C-TTGTC
i Mesocricetus_auratus.KB708139.1                       I 6 C 0
s Microcebus_murinus.CM007691.1                          16508772 7 +  47401472 C-T-ATGTC
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22818444 6 -  98408828 --T-TTGTC
i Microtus_ochrogaster.CM001673.1                       I 6 C 0
s Miopithecus_ogouensis.k141_2935907                          601 4 +     29742 --t---gtc
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirza_zaza.k141_226143                                     4170 7 +      8497 c-tat-gtc
i Mirza_zaza.k141_226143                                C 0 C 0
s Mus_caroli.LT608236.1                                  70764917 6 +  92629107 --T-TTCTT
i Mus_caroli.LT608236.1                                 I 25 C 0
s Mus_musculus.chr16                                     75487953 6 +  98207768 --T-TTCTT
i Mus_musculus.chr16                                    I 25 C 0
s Mus_pahari.LT608305.1                                  67554195 6 +  89017189 --T-TTCTC
i Mus_pahari.LT608305.1                                 I 25 C 0
s Mus_spretus.CM004110.1                                 74329133 6 +  97876770 --T-TTCTT
i Mus_spretus.CM004110.1                                I 25 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              9723 7 +     98495 --ttttatc
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 6 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     88616 5 -    117718 --T--TGTC
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 9 C 0
s Nasalis_larvatus.k141_153429                               7104 5 +     48152 c-t---gtc
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Nomascus_annamensis.k141_302224                             560 5 +      1516 C-T---Gtc
i Nomascus_annamensis.k141_302224                       C 0 I 39
s Nomascus_concolor.k141_49591                               1681 5 +      2014 C-T---Gtc
i Nomascus_concolor.k141_49591                          C 0 C 0
s Nomascus_gabriellae.k141_642452                             606 5 +      2851 c-t---gtc
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             23521 5 -  18771707 c-t---gtc
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  1234 5 +      4512 c-t---gtc
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nycticebus_bengalensis.LG16                            65565713 7 -  95554990 c-tgt-gtc
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            2442 7 +      6470 c-tgt-gtc
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65668050 7 +  89412551 c-tgt-gtc
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4994577 6 -  23139505 --T-TTGTC
i Ochotona_princeps.JH802095.1                          I 5 C 0
s Octodon_degus.JH651621.1                                3684152 5 +  10294119 --T--TGTC
i Octodon_degus.JH651621.1                              I 9 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  123709 6 +    145789 --T-TTGTC
i Ondatra_zibethicus.OndZib_scaffold_6821               I 6 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  35462 6 +     62360 --ttt-gtc
i Onychomys_torridus.OnyTor_scaffold_12578              I 7 C 0
s Oryctolagus_cuniculus.CM000803.1                      141874212 6 + 163896628 --A-TTGTC
i Oryctolagus_cuniculus.CM000803.1                      I 10 C 0
s Otolemur_crassicaudatus.k141_321880                       37603 7 +     38679 c-tat-gtc
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18007031 7 -  38779656 C-T-ATGTC
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Pan_paniscus.CM003386.1                               127573243 5 - 205426864 C-T---GTC
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120150396 5 - 196562556 C-T---GTC
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Papio_anubis.CM001492.2                               188154838 4 - 188283584 --T---GTC
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             3156 4 +      5367 --t---gtc
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47512227 4 +  47705337 --t---gtc
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 66205 4 -    104429 --t---gtc
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    4737 4 +     14967 --t---gtc
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                  598 4 -      7628 --t---gtc
i Papio_ursinus.k141_1345919                            C 0 C 0
s Perodicticus_ibeanus.k141_117958                           3647 7 -     23713 c-tgt-gtc
i Perodicticus_ibeanus.k141_117958                      I 20 C 0
s Perodicticus_potto.k141_713187                            22945 7 -     27972 c-tgt-gtc
i Perodicticus_potto.k141_713187                        I 20 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      41793 6 -     45160 --T-TTGTA
i Perognathus_longimembris.PerPac_flattened_line_22291  I 6 I 6
s Peromyscus_maniculatus.KI615518.1                       4948653 6 -   8017169 --T-ATGTC
i Peromyscus_maniculatus.KI615518.1                     I 6 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    10837 4 -     36578 --t---gtt
i Petromus_typicus.PetTyp_scaffold_33007                I 6 C 0
s Piliocolobus_badius.k141_1987485                            627 5 -      5908 c-t---gtc
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       1246 5 -     17985 c-t---gtc
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                             613 5 +      7694 c-t---gtc
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26739091 5 +  26888534 C-T---GTC
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pithecia_albicans.k141_991845                             42222 5 -     61926 c-t---gtc
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        23651 5 +     78826 c-t---gtc
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              7602 5 -     15800 c-t---gtc
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        10800 5 -     16101 c-t---gtc
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          4109 5 +      9673 c-t---gtc
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13473103 5 -  19735023 C-T---GTC
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           12011 5 -     31692 c-t---gtc
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       21445 5 +     44506 T-T---GTC
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        21655 5 +     67491 T-T---GTC
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      11896 5 -     98129 t-t---gtc
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     21501 5 +    147771 T-T---GTC
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        21750 5 -     23762 T-T---GTC
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          2217 5 -     55515 t-t---gtc
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         21570 5 +    152463 t-t---gtc
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      8330 5 +      8943 T-T---GTC
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                         11290 5 +    134592 t-t---gtc
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          21880 5 -     75465 t-t---gtc
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              185785 5 -    373494 C-T---GTC
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19806433 5 +  19899266 c-t---gtc
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               4348 5 -     15069 c-t---gtc
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              4482 5 +     14865 c-t---gtc
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6847139 7 +  12164890 C-T-ATGTC
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    666348 7 -   2312742 c-tat-gtc
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         2178 7 +     11805 c-tat-gtc
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           41513 7 +     52369 c-tat-gtc
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         33902 7 -     44753 c-tat-atc
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            15823 7 +     27322 c-tat-atc
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       15462 7 -     53241 c-tat-gtc
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         37733 7 -     48185 c-tat-gtc
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           32055 6 +     77221 --T-TTGTC
i Psammomys_obesus.NESX01026517.1                       I 25 C 0
s Pygathrix_cinerea.k141_374971                             28471 5 +     56732 t-t---gtc
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6804962 5 +   6970761 t-t---gtc
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             4356 5 +     18040 t-t---gtc
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rattus_norvegicus.chr11                                13913990 6 +  90463843 --T-TTCTC
i Rattus_norvegicus.chr11                               I 25 C 0
s Rhinopithecus_bieti.k119_1391695                            579 5 -      1866 c-t---gtc
i Rhinopithecus_bieti.k119_1391695                      C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206376236 5 - 206558726 C-T---GTC
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44855136 5 -  45163003 c-t---gtc
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15671320 5 -  43202129 C-T---GTC
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        3237 5 +     34089 C-T---GTC
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              3178 5 -     60842 C-T---GTC
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              3273 5 +     67014 C-T---GTC
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              3251 5 +     60816 C-T---GTC
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 3188 5 -     76454 C-T---GTC
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17339892 5 -  30362882 C-T---GTC
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         19267 5 -     62485 C-T---GTC
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Semnopithecus_entellus.k141_1572367                        1963 5 +     15331 C-T---GTC
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       7360 5 +     20762 c-t---gtc
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         117358 5 +    130994 c-t---gtc
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           36149 5 +     46263 c-t---gtc
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     29263 5 +     42640 C-T---GTC
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        12312 5 +     30600 c-t---gtc
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   98246 6 -    120886 --ttt-gtc
i Sigmodon_hispidus.SigHis_scaffold_11332               I 6 C 0
s Spermophilus_dauricus.KZ294190.1                        2238512 6 +   2842873 --T-TTACC
i Spermophilus_dauricus.KZ294190.1                      I 6 C 0
s Symphalangus_syndactylus.tarseq_24                        13513 5 -  13920577 c-t---gtc
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tarsius_lariang.k141_609102                               25086 6 +     42269 c-tt--gtc
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               58402 6 +     65473 c-tt--gtc
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194006366 4 - 194193292 --T---GTC
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             37885 6 -     47444 --ttt-gtt
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         I 6 C 0
s Trachypithecus_auratus.k141_738098                        25470 5 +     38948 c-t---gtc
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   19197 5 -     32910 c-t---gtc
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                       584 5 -     12939 c-t---gtc
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                        524 5 -     14244 c-t---gtc
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           41917 5 -     54611 c-t---gtc
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_878600                         747 5 +      1165 c-t---gtc
i Trachypithecus_germaini.k141_878600                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     1895 5 -     15592 c-t---gtc
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                           552 5 +     14371 c-t---gtc
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  50309 5 +     51589 c-t---gtc
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       13485 5 +     14732 c-t---gtc
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       3962 5 -     28054 c-t---gtc
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44658757 5 -  44834318 c-t---gtc
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       1060 5 +     13828 c-t---gtc
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Varecia_rubra.k141_432109                                  3844 7 -     20643 c-tat-gtc
i Varecia_rubra.k141_432109                             I 2 C 0
s Varecia_variegata.k141_775891                             23386 7 -     33872 c-tat-gtc
i Varecia_variegata.k141_775891                         I 2 C 0
s Xerus_inauris.XerIna_scaffold_7898                       125614 6 -    134049 --T-TTATC
i Xerus_inauris.XerIna_scaffold_7898                    I 6 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     13834 6 -     20485 --a-cggcc
i Zapus_hudsonius.ZapHud_scaffold_64392                 I 21 I 16
e Eptesicus_fuscus.JH977687.1                             4702143 415 +   6522550 I
e Macroglossus_sobrinus.MacSob_scaffold_879                699974 431 +    802869 I
e Sorex_araneus.JH798170.1                               17748590 843 -  27805282 I
e Erinaceus_europaeus.JH835290.1                         11530833 462 +  16010500 I
e Chaetophractus_vellerosus.ChaVel_scaffold_1070855          1230 0 -      1715 I
e Suricata_suricatta.SurSur_flattened_line_20339            25319 430 +     62062 I
e Ziphius_cavirostris.ZipCav_flattened_line_127025           5301 442 -      8775 I
e Zalophus_californianus.ZalCal_flattened_line_4097        212018 448 -    227762 I
e Vulpes_lagopus.VulLag_flattened_line_2045                135489 449 -    281493 I
e Vicugna_pacos.KN269600.1                                1523037 433 -   2331223 I
e Ursus_maritimus.KK498671.1                              6512543 460 +  28682327 I
e Uropsilus_gracilis.UroGra_scaffold_4143_0                 24925 0 -     25548 I
e Tursiops_truncatus.MRVK01000923.1                      69311805 441 -  96451834 I
e Trichechus_manatus.JH594618.1                          16079679 1700 +  31416278 I
e Tragulus_javanicus.TraJav_scaffold_14717                   3584 419 +     90398 I
e Tonatia_saurophila.TonSau_scaffold_3334                  134241 421 -    259118 I
e Tolypeutes_matacus.TolMat_scaffold_269431                  1990 2406 +      6782 I
e Tapirus_terrestris.TapTer_scaffold_14939                  55756 434 +     99546 I
e Tapirus_indicus.TapInd_scaffold_176                      805095 435 +   1148477 I
e Tamandua_tetradactyla.TamTet_scaffold_26877               13106 433 +     45698 I
e Tadarida_brasiliensis.TadBra_scaffold_145589               4174 407 -      6213 I
e Sus_scrofa.CM000824.4                                 189270228 447 + 218635234 I
e Spilogale_gracilis.SpiGra_flattened_line_905             232751 445 -    276980 I
e Solenodon_paradoxus.SolPar_flattened_line_1012            16376 416 +    739146 I
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   29737 434 -    114521 I
e Saiga_tatarica.SaiTat_scaffold_82192                       5983 428 +     12214 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                17647 435 +    109198 I
e Rhinolophus_sinicus.LVEH01000179.1                      1786172 430 +   2252614 I
e Rangifer_tarandus.RanTarSib_scaffold_24239                14178 431 +     68503 I
e Puma_concolor.QAVW01000427.1                          131532079 431 - 161321710 I
e Pteropus_vampyrus.KN525959.1                             602305 437 -   3946241 I
e Pteropus_alecto.KB031157.1                             13244354 438 -  17261082 I
e Pteronura_brasiliensis.PteBra_flattened_line_1343        243991 454 -    344369 I
e Pteronotus_parnellii.KE867983.1                            2230 422 -     27784 I
e Procavia_capensis.ProCapCap_scaffold_15315                74302 1939 +     78963 I
e Platanista_gangetica.PlaMin_flattened_line_72990           3771 443 +     21690 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            95224 410 +    112873 I
e Phocoena_phocoena.PhoPho_flattened_line_11948            119703 443 -    122454 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113416 447 -    135482 I
e Pantholops_hodgsonii.KE114631.1                         1064538 417 -   1292953 I
e Panthera_tigris.KE721879.1                              5025497 431 -   6340057 I
e Panthera_pardus.KV860323.1                              3635849 432 +  18214204 I
e Panthera_onca.PanOnc_flattened_line_1615                  32116 431 +    295523 I
e Ovis_canadensis.OviCan_scaffold_6251                      76891 417 +    140051 I
e Ovis_aries.CM001582.2                                 134075677 417 - 275406953 I
e Otocyon_megalotis.JAEUCK010005121.1                      305421 444 -    505867 I
e Orycteropus_afer.OryAfe_flattened_line_13509              41471 1764 -     66828 I
e Orcinus_orca.KB316965.1                                 7223086 443 -   7562323 I
e Okapia_johnstoni.LVCL01S0017931.1                         35255 573 +     78940 I
e Odocoileus_virginianus.KZ101650.1                       1078100 432 +   1425656 I
e Odobenus_rosmarus.KB229369.1                             677288 443 -   3126709 I
e Nyctereutes_procyonoides.CAJHUB010000786.1                28082 449 +   3668941 I
e Noctilio_leporinus.NocLep_scaffold_12062                  47676 415 +     94413 I
e Neophocaena_asiaeorientalis.KZ688543.1                  3949402 443 -   4490290 I
e Neomonachus_schauinslandi.NINY01007774.1                4482632 454 -  14209539 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3432 432 -      8794 I
e Myotis_myotis.MyoMyo_scaffold_6123                         8554 416 +     66751 I
e Myotis_lucifugus.GL429887.1                             3463359 417 -   3747815 I
e Myotis_davidii.KB114863.1                               5017463 416 +   6462685 I
e Myotis_brandtii.KE161952.1                               965772 418 +   8389877 I
e Mustela_putorius.JH417978.1                             4421898 453 -  28371801 I
e Murina_feae.MurFea_scaffold_2254                          17451 414 -    100666 I
e Mungos_mungo.MunMun_flattened_line_8729                  142653 430 -    168139 I
e Moschus_moschiferus.MosMos_scaffold_146101                 2972 432 -      4346 I
e Mormoops_blainvillei.MorMeg_scaffold_2952                159560 424 +    265003 I
e Monodon_monoceros.MonMon_M_scaffold_5598                 144790 442 +    154973 I
e Mirounga_angustirostris.MirAng_flattened_line_8852         9033 661 -    104932 I
e Miniopterus_schreibersii.MinSch_scaffold_24116            32480 421 +     45743 I
e Miniopterus_natalensis.LDJU01000022.1                   8207809 420 +  10048721 I
e Micronycteris_hirsuta.MicHir_scaffold_37978               21050 428 -     32043 I
e Microgale_talazaci.MicTal_scaffold_34660                  29351 1133 -     48017 I
e Mellivora_capensis.MelCap_flattened_line_146202             327 452 -      1999 I
e Megaderma_lyra.MegLyr_scaffold_3562                       62628 576 -    234502 I
e Manis_pentadactyla.KN017078.1                             34538 441 +     58827 I
e Manis_javanica.JSZB01003966.1                            144466 438 +    252755 I
e Lycaon_pictus.CM007556.1                               11085089 449 +  39895028 I
e Loxodonta_africana.GL010040.1                          20589215 1702 -  62548349 I
e Lipotes_vexillifer.KE558548.1                            134353 444 +   3060487 I
e Leptonychotes_weddellii.KB714749.1                      3083728 458 -   3498232 I
e Lasiurus_borealis.LasBor_scaffold_5102                   111937 417 -    115756 I
e Kogia_breviceps.KogBre_flattened_line_35920               22021 443 +     37189 I
e Inia_geoffrensis.IniGeo_flattened_line_66725               7195 437 +     17520 I
e Hyaena_hyaena.HyaHya_flattened_line_20729                 14013 474 -     67322 I
e Hipposideros_galeritus.HipGal_scaffold_104691              5946 409 -      9143 I
e Hipposideros_armiger.JXIK01001085.1                      276788 408 -    477199 I
e Hippopotamus_amphibius.HipAmp_scaffold_1308              145449 430 +    277961 I
e Heterohyrax_brucei.HetBruBak_scaffold_25354               54438 1939 +     73687 I
e Hemitragus_hylocrius.HemHyl_scaffold_16669                25884 416 -     91191 I
e Helogale_parvula.HelPar_flattened_line_22962              14960 432 +     53719 I
e Giraffa_tippelskirchi.LVKQ01S012154.1                    179385 717 -    189561 I
e Felis_nigripes.FelNig_flattened_line_8080                 18925 427 +     52776 I
e Felis_catus_fca126.CM031420.1                         129277790 427 - 158578461 I
e Eubalaena_japonica.EubJap_flattened_line_7756             59838 466 +     89355 I
e Eschrichtius_robustus.EscRob_flattened_line_685          313408 442 +    330699 I
e Equus_przewalskii.ATBW01073585.1                          11036 704 +     92910 I
e Equus_caballus.CM000402.2                              13349546 704 +  41866177 I
e Equus_asinus.JREZ01000062.1                             5851044 703 -   7175178 I
e Enhydra_lutris.KZ291749.1                              85869516 453 +  99434291 I
e Elephantulus_edwardii.JH947210.1                        7804622 10712 +  15467074 I
e Elaphurus_davidianus.JRFZ01086400.1                     1489870 432 +   1727528 I
e Eidolon_helvum.KE772537.1                                 10556 435 +     24177 I
e Echinops_telfairi.JH980316.1                           22994071 0 -  44670279 C
e Diceros_bicornis.DicBicMic_scaffold_9545                    953 1024 +    151128 I
e Dicerorhinus_sumatrensis.PEKH010003161.1                 320309 1016 +    993696 I
e Desmodus_rotundus.KZ672188.1                           18697183 419 -  18957592 I
e Delphinapterus_leucas.KZ290064.1                       80035206 438 -  96802777 I
e Dasypus_novemcinctus.JH568778.1                          180040 2424 -   6883506 I
e Cryptoprocta_ferox.CryFer_flattened_line_19014            49751 433 -     70449 I
e Crocidura_indochinensis.CroInd_scaffold_38409             18067 408 -     19186 I
e Craseonycteris_thonglongyai.CraTho_scaffold_22679         37588 826 -     40477 I
e Condylura_cristata.JH655880.1                          60611131 297 +  78930452 I
e Choloepus_hoffmanni.KN194586.1                           760141 439 +    964067 I
e Choloepus_didactylus.ChoDid_scaffold_36182                14830 439 -     21363 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_160623         1406 1024 -      9338 I
e Catagonus_wagneri.CatWag_scaffold_1305                   157166 412 -    276539 I
e Carollia_perspicillata.CarPer_scaffold_4436               57873 420 +     67245 I
e Capra_hircus.CM004562.1                               135704839 417 - 157403528 I
e Capra_aegagrus.CM003214.1                              21323612 417 + 157394656 I
e Canis_lupus_orion.HG994411.1                           16452657 449 -  44759192 I
e Canis_lupus_familiaris.chr31                           11085633 449 +  39895921 I
e Canis_lupus_dingo.QKWQ01001993.1                       11263104 449 -  35597290 I
e Canis_lupus_VD.CanFam_VD_scaffold_16982                   11461 449 +     87036 I
e CanFam4.chr31                                          11516443 449 +  39901454 I
e Camelus_ferus.KB016973.1                                2971365 436 +   6889770 I
e Camelus_dromedarius.KN271192.1                           395631 437 -  15254737 I
e Camelus_bactrianus.KN276303.1                           3217927 436 -   8989139 I
e Bubalus_bubalis.KI419065.1                              1229342 431 -   1914593 I
e Bos_taurus.CM000177.6                                 136293586 432 - 158972876 I
e Bos_mutus.JH883513.1                                     570227 432 -    998990 I
e Bos_indicus.CM003021.1                                138137853 432 - 161108492 I
e Bison_bison.KN264915.1                                  6557614 432 +   6870073 I
e Beatragus_hunteri.BeaHun_scaffold_21644                   41603 412 -     72089 I
e Balaenoptera_bonaerensis.DF502048.1                        3753 444 -     13118 I
e Balaenoptera_acutorostrata.KI537095.1                  26378522 443 +  51448160 I
e Artibeus_jamaicensis.ArtJam_scaffold_41619                 7075 421 -     29036 I
e Antilocapra_americana.AntAmePen_scaffold_42841            29107 427 +     33004 I
e Anoura_caudifer.AnoCau_scaffold_422                      388679 416 -    631301 I
e Ammotragus_lervia.NIVO01013474.1                        3518508 445 +   4113121 I
e Ailurus_fulgens.LNAC01000003.1                          7091784 657 -  16596857 I
e Ailuropoda_melanoleuca.LNAT01000321.1                  10655057 459 +  23371972 I
e Acinonyx_jubatus.LLWD01000356.1                         2031739 430 +   3721120 I
e Hylobates_pileatus_a.tarseq_592                             30921 2351 -     60944 I
e Hylobates_pileatus_b.ContigUN                                 14622428 998 -  25970782 I
e Hylobates_muelleri.k141_1133650                            2317 0 -      2775 I
e Hylobates_klossii.k141_466549                              9327 960 +     11537 I
e Hylobates_agilis.k141_1485652                              1303 0 -      1697 I
e Hylobates_abbotti.k141_493872                              2882 965 +      5897 I
e Tupaia_tana.TupTan_flattened_line_68454                    3498 0 +     13056 C
e Tupaia_chinensis.KB320831.1                             2791239 0 -   3938065 C
e Nannospalax_galili.KL201303.1                            116751 3 +    362372 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               10505 39 +    209709 ACAAActatcatctat-g---ctc---ct-agg--ggtc--tggtca--t----c--------tt
s Allactaga_bullata.AllBul_scaffold_70162                   11536 23 -     22067 -----------------------tcttct-taa--ggcc--tattca--t----c--------tt
i Allactaga_bullata.AllBul_scaffold_70162               I 16 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    111056  9 -    189883 AC----CATCATA----------------------------------------------------
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Allenopithecus_nigroviridis.k141_3103728                   1112 39 +      1665 acaaactatcatctat-t---ctg---cc-aag--agtc--tggcca--t----c--------ct
i Allenopithecus_nigroviridis.k141_3103728              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                          598 39 -     29318 acaaactatcatctat-t---ctG---CC-AAC--AGTC--TGGCCA--T----C--------TT
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_21674                            815 39 -      1421 acaaactatcatctat-t---ctG---CC-AAC--AGTC--TGGCCA--T----C--------TT
i Allochrocebus_preussi.k141_21674                      C 0 C 0
s Allochrocebus_solatus.k141_371672                           492 39 -     80423 acaaactatcatctat-t---ctG---CC-AAC--AGTC--TGGCCA--T----C--------TT
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             8771 39 -     18050 acaaactctcacgtct-t---ctg---ct-aag--ggTC--TGATCA--T----C--------TT
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  9884 39 -     11521 ACAAACTCTCACGTCT-T---CTG---CT-AAG--GGTC--TGATCA--T----C--------TT
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              9448 39 -     21359 acaaactctcacgtct-t---ctg---ct-aag--ggTC--TGATCA--T----C--------TT
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_298055                                  739 39 +      1823 ACAAACTCTCACGTCT-T---CTG---CT-AAG--GGTC--TGATCA--T----C--------TT
i Alouatta_juara.k141_298055                            C 0 C 0
s Alouatta_macconnelli.k141_1331706                          8739 39 -     10438 acaaactctcacgtct-t---ctg---ct-aag--ggTC--TGATCA--T----C--------TT
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            5395 39 +      7047 acaaactctcacgtct-t---ctg---ct-aag--ggTC--TGATCA--T----C--------TT
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             8680 39 +     10410 acaaactctcacgtct-t---ctg---ct-aag--ggTC--TGATCA--T----C--------TT
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            2485 39 -      4927 ACAAACTCTCACGTCT-T---CTG---CT-AAG--GGTC--TGATCA--T----C--------TT
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             5414 39 +      6429 ACAAACTCTCACGTCT-T---CTG---CT-AAG--GGTC--TGATCA--T----C--------CT
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Aotus_azarae.k141_3170768                                 61138 38 +     78111 acaaactatcatgtct-t---ct----ct-aag--ggtc--tgatca--t----c--------tt
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            4079 38 +     22701 acaaactatcatgtct-t---ct----ct-aag--ggtc--tgatca--t----c--------tt
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5748036 38 +   9889416 ACAAACTATCATGTCT-T---CT----CT-AAG--GGTC--TGATCA--T----C--------TT
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             4621 38 -    104377 acaaactatcatgtct-t---ct----ct-aag--ggtc--tgatca--t----c--------tt
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               4627 38 +     23246 acaaactatcatgtct-t---ct----ct-aag--ggtc--tgatca--t----c--------tt
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     2450 39 +      5067 acaaatgaccaccaat-t---tat---tg-aag--gacc--tgttca--t----c--------tt
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      16427 39 +     17483 ACAAACTACCTTTTAT-T---CTT--TCT--GA--GGCC--CCTTCG--C----C--------TT
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9537871 39 +  39197703 ACAAACTCTCACTTCT-T---CTG---CT-AAG--GGTC--TGATCA--T----C--------TT
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             59155 39 +     85812 ACAAACTCTCACTTCT-T---CTG---CT-AAG--GGTC--TGATCA--T----C--------TT
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                10154 39 +     89302 ACAAACTCTCACTTCT-T---CTG---CT-AAG--GGTC--TGATCA--T----C--------TT
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             14659 39 -     58268 acaaactctcacttct-t---ctg---ct-aag--ggTC--TGATCA--T----C--------TT
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             62650 39 +    119057 ACAAACTCTCACTTCT-T---CTG---CT-AAG--GGTC--TGATCA--T----C--------TT
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               4619 39 -     25888 acaaactctcacttct-t---ctg---ct-aag--ggTC--TGATCA--T----C--------TT
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 5259 39 -     16375 acaaactgtcacctgt-t---ctt---ct-cag--ggcc--cattca--t----c--------tt
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              1578 39 +      2719 acaaactgtcacctgt-t---ctt---ct-cag--ggcc--cattca--t----c--------tt
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Cacajao_ayresi.k141_724503                               112513 39 -    171031 acaaactatcacctct-t---ctg---ct-aag--ggtc--tgatca--t----c--------tt
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 11539 39 +    125063 acaaactatcacctct-t---ctg---ct-aag--ggtc--tgatca--t----c--------tt
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                13587 39 -    216513 acaaactatcacctct-t---ctg---ct-aag--ggtc--tgatca--t----c--------tt
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        6127 39 -    134917 acaaactatcacctct-t---ctg---ct-aag--ggtc--tgatca--t----c--------tt
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Capromys_pilorides.CapPil_scaffold_933029                   638 39 +      1311 ATAAGTCATCACCTGC-A---Att---ct-aaa--ggct--tattcg--t----c--------tt
i Capromys_pilorides.CapPil_scaffold_933029             I 615 I 284
s Carlito_syrichta.NW_007248099.1                          307609 39 +    345090 acaaactatcagctgt-t---cCT---TT-AAG--GCCA--TAACCA--T----C--------TT
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   29040 39 +     33760 ccaaactgtcacctca-t---ctt---tt-cag--aaat--aaccag--t----c--------tt
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15785196 37 -  24422027 ACAAGTCATTGCCTGC-A---TTT---CT-AAA--GAC----ATCCA--T----C--------TT
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15797130 37 -  24440124 ACAAGTCATTGTCTGC-A---TTT---CT-AAA--GAC----ATCca--t----c--------tt
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       175321 37 +    436027 acaagtcattgtctgc-a---ttt---ct-aaa--gac----atcca--t----c--------tt
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18889370 39 -  29618158 acaaactatcacatct-t---ctg---ct-aag--ggtc--tgatca--t----c--------ct
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 6914 39 -     26817 acaaactatcacatct-t---ctg---ct-aag--ggTC--TGATCA--T----C--------CT
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                11154 39 +     25043 acaaactatcacatct-t---ctg---ct-aag--ggTC--TGATCA--T----C--------CT
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         6642 39 +     21754 acaaactatcagctgt-t---cct---tt-aag--gaca--taacca--t----c--------tt
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6553804 39 +   6739814 ACAAACTATCATCTAC-T---CTG---CC-AAG--AGTC--TGGCCA--T----C--------TT
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      25281 39 +     60454 acaaactatcatctac-t---ctG---CC-AAG--AGTC--TGGCCA--T----C--------TT
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                           486 39 -     21101 acaaactatcatctac-t---ctG---CC-AAG--AGTC--TGGCCA--T----C--------TT
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         57796 39 -    107033 acaaactatcatctac-t---ctG---CC-AAG--AGTC--TGGCCA--T----C--------TT
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                         697 39 -     17608 acaaactatcatctac-t---ctG---CC-AAG--AGTC--TGGCCA--T----C--------TT
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          28195 39 +     30494 acaaactatcatctac-t---ctG---CC-AAG--AGTC--TGGCCA--T----C--------TT
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          57038 39 -     59240 acaaactatcatctac-t---ctG---CC-AAG--AGTC--TGGCCA--T----C--------TT
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                           739 39 +     16677 acaaactatcatctac-t---ctG---CC-AAG--AGTC--TGGCCA--T----C--------TT
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           22897 39 +     35983 acaaactatcatctac-t---ctG---CC-AAG--AGTC--TGGCCA--T----C--------TT
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11989428 39 +  12117833 acaaactatcatctac-t---ctG---CC-AAG--AGTC--TGGCCA--T----C--------TT
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46476183 39 +  46592721 acaaactatcatctac-t---ctG---CC-AAG--AGTC--TGGCCA--T----C--------TT
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      39734 39 -     45581 acaaactatcatctat-t---ctG---CC-AAG--AGTC--TGGCCA--T----C--------TT
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                        743 39 +     35577 acaaactatcatctac-t---ctG---CC-AAG--AGTC--TGGCCA--T----C--------TT
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                         516 39 -     25661 acaaactatcatctac-t---ctG---CC-AAG--AGTC--TGGCCA--T----C--------TT
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                         494 39 -     17744 acaaactatcatctac-t---ctG---CC-AAG--AGTC--TGGCCA--T----C--------TT
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        20103 39 +     37128 acaaactatcatctac-t---ctG---CC-AAG--AGTC--TGGCCA--T----C--------TT
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           57562 39 -     68416 acaaactatcacctgt-t---ctt---ct-cag--agcc--cattca--t----c--------tt
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            6605 39 +     13308 acaaactatcacctat-t---ctt---ct-cag--agcc--cattca--t----c--------tt
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             4163 39 -     18223 acaaactatcacctct-t---ctG---TT-AAG--GGTC--TGATCA--T----C--------TT
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             21186 39 +     25473 acaaactatcacctct-t---ctG---TT-AAG--GGTC--TGATCA--T----C--------TT
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           40221 39 +     57117 ACAAACTATCACCTCT-T---CTG---TT-AAG--GGTC--TGATCA--T----C--------TT
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          44900 39 +     54541 acaaactatcacctct-t---ctG---TT-AAG--GGTC--TGATCA--T----C--------TT
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15960345 38 +  43084221 aca-gacattacctgc-a---att---ct-aaa--gagt--tgttca--t----c--------tt
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         69722 39 +    196370 acaaactatcacctct-t---ctg---ct-aag--ggtc--tgatca--t----c--------tt
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          13902 39 +     40510 acaaactatcacctct-t---ctg---ct-aag--ggtc--tgatca--t----c--------tt
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15137658 39 -  15256731 acaaactatcatctat-t---ctG---CC-AAG--AGTC--TGGCCA--T----C--------TT
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      32705 39 -     53260 acaaactatcatctat-t---ctG---CC-AAG--AGTC--TGGCCA--T----C--------TT
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101143268 39 + 101219884 ACAAACTATCATCTAT-T---CTG---CC-AAG--AGTC--TGGCCA--T----C--------TT
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10885026 19 +  10971483 ACAAACTATCAACTAT-T---CT------------------------------------------
i Colobus_angolensis.KN985967.1                         C 0 I 17
s Colobus_guereza.LG08                                  147663190 19 + 156195979 acaaactatcaactat-t---ct------------------------------------------
i Colobus_guereza.LG08                                  C 0 I 17
s Colobus_polykomos.k141_1406057                            15174 19 +     23629 acaaactatcaactat-t---ct------------------------------------------
i Colobus_polykomos.k141_1406057                        C 0 I 17
s Cricetomys_gambianus.CriGam_scaffold_949                 276950 22 -    399297 ---------------------ctc---tt-aag--ggtt--cactca--c----c--------tt
i Cricetomys_gambianus.CriGam_scaffold_949              I 5 C 0
s Cricetulus_griseus.LT883672.1                          53027591 35 +  72327488 AC----CATCATATGT-C---CCA---GG-AAG--GGTC--CACTCA--C----C--------TT
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  206778 22 -    956709 ---------------------ctt---ct-acg--ggtc--tgctca--t----c--------gt
i Ctenodactylus_gundi.CteGun_scaffold_447               I 14 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 29317 39 -     67205 ACAAGGCATTGCCTAC-A---Att---ct-aaa--gact--tgttca--t----t--------tt
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                16351 39 +     26546 acaaatcattgcctgc-a---att---ct-aaa--gacc--tatgga--t----c--------tt
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             57449 39 -    236241 ataagccattacctac-a---att---ct-aaa--gacc--tattca--t----g--------tt
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16843420 39 +  31942871 acaaactgtcacccat-t---ctt---ct-cag--ggcc--caatca--t----c--------tt
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   156235 38 +    228994 aca-gacattacctgc-a---act---ct-aag--gact--tattca--t----c--------tt
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3654602  9 +   4240102 ------------------------------------------GTAAA--T----C--------TT
i Dipodomys_ordii.KN672545.1                            I 436 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 26240  9 +     28912 ------------------------------------------ATAAA--T----C--------TT
i Dipodomys_stephensi.DipSte_scaffold_44365             I 430 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                34699 37 -     73477 ataagtcattgcctgc-a---att---ct-aaa--gac----attca--t----c--------tt
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        238244 35 -    369425 CC----CATCATATGT-T---CTC---CG-AAG--GGTC--CACATA--T----C--------TT
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           5260 35 -      7838 AC----CATCGTATGT-T---CTC---CG-AAG--GGTC--CACCCA--T----C--------TT
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Erythrocebus_patas.Contig8                             48769838 39 -  48907691 acaaactatcatctat-t---ctG---CC-AAG--AGTC--TGGCCA--T----C--------TT
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eulemur_albifrons.k141_715837                              3605 39 +     13586 acaaactatcacctat-t---ctt---c-tcag--ggcc--cattca--t----c--------tt
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               3540 39 -      6809 acaaactatcacctat-t---ctt---c-tcag--ggcc--cattca--t----c--------tt
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            10015 39 +     36558 acaaactatcacctat-t---ctt---c-tcag--ggcc--cattca--t----c--------tt
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             6331 39 +     60246 acaaactatcacctat-t---ctt---c-tcag--ggcc--cattca--t----c--------tt
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 9813 39 +    109717 acaaactatcacctat-t---ctt---c-tcag--ggcc--cattca--t----c--------tt
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               14193 39 +     16540 acaaactatcacctat-t---ctt---c-tcag--ggcc--cattca--t----c--------tt
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                14468 19 +     27497 acaaactatcacctat-t---ct------------------------------------------
i Eulemur_mongoz.k141_825972                            C 0 I 17
s Eulemur_rubriventer.k141_411740                           16925 39 +     26808 acaaactatcacctat-t---ctt---c-tcag--ggcc--cattca--t----c--------tt
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                31658 39 +     46535 acaaactatcacctat-t---ctc---c-tcag--ggcc--cattca--t----c--------tt
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              14381 39 -     29447 acaaactatcacctat-t---ctt---c-tcag--ggcc--cattca--t----c--------tt
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Fukomys_damarensis.KN123630.1                          13891299 39 -  19261668 AGAAATCATTACCTGC-T---CTT---TG-AAA--GACT--TATTCA--T----C--------TT
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     209516 20 -    847004 acaaactatcttttat-t---ctt-----------------------------------------
i Galago_moholi.ctg555                                  C 0 I 15
s Galago_senegalensis.k141_964197                           11895 20 -     43889 acaaactatcttttat-t---ctt-----------------------------------------
i Galago_senegalensis.k141_964197                       C 0 I 15
s Galagoides_demidoff.k141_1769638                           8964 39 +     27357 ccaaactatcttttat-t---ctt-t-cc--aa--ggcc--ccttca--c----t--------tt
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               154863 39 +    324696 ccaaactatcacctac-t---ctt---ct-aag--gacc--cattca--t----c--------tt
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           11248 35 -     18683 ac----aatcacccac-a---cct---ct-aag--gacc--catcca--t----c--------tt
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               3905 39 -     14630 acaaactatcatctat-t---ctg---ct-aag--ggtc--tggtca--t----c--------tt
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119651004 39 - 195582420 acaaactatcatctat-t---ctg---ct-aag--ggtc--tggtca--t----c--------tt
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   75989 39 +    118900 accaactattacctac-a---tct---ct-aag--gacc--cagtca--t----c--------tt
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                          430 38 +     10286 acaaactatcacctat-t---ctt---c--cag--ggcc--cattca--t----c--------tt
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_1254239                            8580 38 +      9690 acaaactatcacctat-t---ctt---c--cag--ggcc--cattca--t----c--------tt
i Hapalemur_gilberti.k141_1254239                       C 0 C 0
s Hapalemur_griseus.k141_1387522                             4209 38 +     56096 acaaactatcacctat-t---ctt---c--cag--ggcc--cattca--t----c--------tt
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        27485 38 -     42470 acaaactatcacctat-t---ctt---c--cag--ggcc--cattca--t----c--------tt
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        44083 38 -     54384 acaaactatcacctat-t---ctt---c--cag--ggcc--cattca--t----c--------tt
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2549691 39 +  31725842 acaaatcattacctgc-t---ctt---ct-aag--gacc--tactca--t----c--------tt
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Hoolock_leuconedys.ctg2405                                   13936 39 -     15084 acaaactgtcatctat-t---ctg---ct-aag--ggtc--tggtca--t----c--------tt
i Hoolock_leuconedys.ctg2405                               I 130 I 7
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           17600 37 -    119109 acaagtcattgcctgc-a---att---ct-aaa--gac----actca--t----c--------tt
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     4742 41 +     22540 aaacatcatttcctgc-tcttctt---ct-cag--gaca---tttca--t----c--------tt
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7124602 41 +  13083262 ACAAATGattcccaag-t---ttt---ct-aag--gaccTCCTTGCA--G----C--------TT
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_1884019                                   1852 41 -      2196 acaaactatcacctgt-t---ctt---ct-cag--ggcc--cattcatct----g--------tt
i Indri_indri.k141_1884019                              C 0 C 0
s Jaculus_jaculus.JH725517.1                              8564283 20 +  11848649 -----------------------T---CT-TAA--GGCC--TATTCA--T----C--------TT
i Jaculus_jaculus.JH725517.1                            I 16 C 0
s Lagothrix_lagothricha.k141_12968                          48740 39 -    147782 acaaactctcacgtct-t---ctg---ct-aag--ggTC--TGATCA--T----C--------TT
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lemur_catta.scaffold_1                                258405765 38 - 285822530 acaaactatcacctat-t---ctt---c--cag--ggcc--cattca--t----c--------tt
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        22535 39 +     39228 acaaactatcacctat-t---ctt---ct-cag--ggcc--cattca--t----c--------tt
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            51910 39 +     63517 acaaactatcacctat-t---ctt---ct-cag--ggcc--cattca--t----c--------tt
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        77153 39 +    116806 acaaactatcacctat-t---ctt---ct-cag--ggcc--cattca--t----c--------tt
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     30174 39 -     33031 acaaactatcacctat-t---ctt---ct-cag--ggcc--cattca--t----c--------tt
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    11578 51 +     22452 acaaactgccaccttt-a---cct---ca-atg--aacc--cattca--agatccccaccctcct
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lophocebus_aterrimus.ctg55                             19246893 39 +  19376315 acaaactatcatctac-t---ctG---CC-AAG--AGTC--TGGCCA--T----C--------TT
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            9278 38 +     84689 acaaactatctttcat-t---ctt---cc--aa--ggcc--ccttca--c----c--------tt
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3777027 38 +   6799190 acaaactatctttcat-t---ctt---cc--aa--ggcc--ccttca--c----c--------tt
i Loris_tardigradus.ctg97                               C 0 C 0
s Macaca_arctoides.k141_2201161                             18582 39 +     74745 acaaactatcatctac-t---ctG---CC-AAG--AGTC--TGGCCA--T----C--------TT
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12705099 39 +  12821369 acaaactatcatctac-t---ctG---CC-AAG--AGTC--TGGCCA--T----C--------TT
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                 744 39 -      3136 acaaactatcatctac-t---ctG---CC-AAG--AGTC--TGGCCA--T----C--------TT
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           45495 39 +     63263 acaaactatcatctac-t---ctG---CC-AAG--AGTC--TGGCCA--T----C--------TT
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                  261 39 -      2568 acaaactatcatctac-t---ctG---CC-AAG--AGTC--TGGCCA--T----C--------TT
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                  769 39 -      7381 acaaactatcatctac-t---ctG---CC-AAG--AGTC--TGGCCA--T----C--------TT
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  44006 39 -     79256 acaaactatcatctac-t---ctG---CC-AAG--AGTC--TGGCCA--T----C--------TT
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196034176 39 + 196197964 ACAAACTATCATCTAC-T---CTG---CC-AAG--AGTC--TGgcca--t----c--------tt
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11444281 39 +  11645122 ACAAACTATCATCTAC-T---CTG---CC-AAG--AGTC--TGgcca--t----c--------tt
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   2953 39 -     46448 acaaactatcatctac-t---ctG---CC-AAG--AGTC--TGGCCA--T----C--------TT
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                 625 39 -     13212 acaaactatcatctac-t---ctG---CC-AAG--AGTC--TGGCCA--T----C--------TT
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 14367 39 -     55006 acaaactatcatctac-t---ctG---CC-AAG--AGTC--TGGCCA--T----C--------TT
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43839404 39 +  43892939 acaaactatcatctac-t---ctG---CC-AAG--AGTC--TGGCCA--T----C--------TT
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               15654 39 -     24607 acaaactatcatctac-t---ctG---CC-AAG--AGTC--TGGCCA--T----C--------TT
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               2958 39 -     27140 acaaactatcatctac-t---ctG---CC-AAG--AGTA--TGGCCA--T----C--------TT
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43436052 39 -  43563597 acaaactatcatccac-t---ctG---CC-AAG--AGTC--TGGCCA--T----C--------TT
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4448878 39 -   4543643 acaaactatcatccac-t---ctG---CC-AAg--agtc--tagcca--t----c--------tt
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36872437 41 +  64221397 ACAAATGATTCCCTAG-T---TTT---CT-AAG--GACCTCCTTGCA--G----C--------TT
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               10511  9 +     15977 AG----GATGATA----------------------------------------------------
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1045329 35 -  26018355 AC----CATCATATGT-C---CCT---GA-AAG--CGTA--TGCTCA--T----C--------TT
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Microcebus_murinus.CM007691.1                          16508779 38 +  47401472 ATAGACTATCACCTAT-T---CTT---CT-CAG--GGCc--catt-a--t----t--------tt
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22818450 35 -  98408828 AC----CATTGTATGT-T---CTC---CG-AAG--GATC--CACTCA--T----C--------TT
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miopithecus_ogouensis.k141_2935907                          605 39 +     29742 acaaactatcatctac-t---ctG---CC-AAG--AGTC--TGGCCA--T----C--------TT
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirza_zaza.k141_226143                                     4177 39 +      8497 acagactatcacctat-t---ctt---ct-cag--ggcc--cattta--t----t--------tt
i Mirza_zaza.k141_226143                                C 0 C 0
s Mus_caroli.LT608236.1                                  70764923 35 +  92629107 AC----CATCAGGTAT-T---TTT---CT-AAA--GGTA--CACTCA--T----C--------TT
i Mus_caroli.LT608236.1                                 C 0 I 30
s Mus_musculus.chr16                                     75487959 35 +  98207768 AC----CATCAGGTAT-T---TTT---CT-AAA--GGTC--CACTCA--T----C--------TT
i Mus_musculus.chr16                                    C 0 I 31
s Mus_pahari.LT608305.1                                  67554201 35 +  89017189 AC----CATCAGGTAT-T---TTT---CT-AAA--GGTC--CACTCA--T----C--------TT
i Mus_pahari.LT608305.1                                 C 0 I 30
s Mus_spretus.CM004110.1                                 74329139 35 +  97876770 AC----CATCAGGTAT-T---TTT---CT-AAA--GGTC--CACTCA--T----C--------TT
i Mus_spretus.CM004110.1                                C 0 I 30
s Muscardinus_avellanarius.MusAve_scaffold_9643              9730 39 +     98495 acatactaccacctac-t---ctt---ct-aag--gacc--catcca--t----c--------tt
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     88621 39 -    117718 GTAAGTCATCGCCTGC-C---Gtt---ct-aga--ggct--tattga--t----c--------tt
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Nannospalax_galili.KL201303.1                            116754 34 +    362372 --G-ATTGTCTCCTGT-T-----C---TT-AAG--GGCA--CACTCA--T----C--------TT
i Nannospalax_galili.KL201303.1                         I 3 C 0
s Nasalis_larvatus.k141_153429                               7109 19 +     48152 acaaactatcaactat-t---ct------------------------------------------
i Nasalis_larvatus.k141_153429                          C 0 I 17
s Nomascus_annamensis.k141_1439838                           1463 39 +      3718 acaaactatcatctat-t---ctg---ct-aag--ggtc--tggtca--t----c--------tt
i Nomascus_annamensis.k141_1439838                      I 833 I 7
s Nomascus_concolor.k141_49591                               1686 39 +      2014 acagactgtcatctat-t---ctg---ct-aag--ggtc--tggtca--t----c--------tt
i Nomascus_concolor.k141_49591                          C 0 C 0
s Nomascus_gabriellae.k141_642452                             611 39 +      2851 acaaactatcatctat-t---ctg---ct-aag--ggtc--tggtca--t----c--------tt
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             23526 39 -  18771707 acaaactatcatctat-t---ctg---ct-aag--ggtc--tggtca--t----c--------tt
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  1239 39 +      4512 acaaactatcatctat-t---ctg---ct-aag--ggtc--tggtca--t----c--------tt
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nycticebus_bengalensis.LG16                            65565720 38 -  95554990 acaaacTCTCTCTCAT-C---CTT---CC--AA--AGCC--CCTTCA--C----C--------TT
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            2449 38 +      6470 acaaacTCTCTCTCAT-C---CTT---CC--AA--ggcc--ccttca--c----c--------tt
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65668057 38 +  89412551 acaaactatctctcat-t---ctt---cc--aa--ggcc--ccttca--c----c--------tt
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4994583 43 -  23139505 ACGAACGCCCACCAGT-C---CTT---CC-AAG--ACTC--CATTCA--TTGTCC--------CT
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3684157 39 +  10294119 GCAAGTCATTGCCTAT-A---GTT---CT-AAA--GACT--TATTCA--T----C--------TT
i Octodon_degus.JH651621.1                              C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  123715 35 +    145789 AC----CATCGGATGT-T---CTC---TG-AAG--GGTC--CGCTCA--T----C--------TT
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  35468 35 +     62360 ac----gattatatgt-t---ttc---tg-aag--ggcc--cattca--t----c--------tt
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141874218 51 + 163896628 ACAAACTGCCACCTTT-G---CCT---CA-AAG--AACT--CACTCA--AGGTCCCCACCCTTCT
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       37610 20 +     38679 acaaactatcttttat-t---cta-----------------------------------------
i Otolemur_crassicaudatus.k141_321880                   C 0 I 15
s Otolemur_garnettii.GL873528.1                          18007038 20 -  38779656 ACAAACTATCTTTTAT-T---CTA-----------------------------------------
i Otolemur_garnettii.GL873528.1                         C 0 I 15
s Pan_paniscus.CM003386.1                               127573248 39 - 205426864 ACAAACTATCATCTAT-T---CTG---CT-AAG--GGTC--TGGTCA--T----C--------TT
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120150401 39 - 196562556 ACAAActatcatctat-t---ctg---ct-aag--ggtc--tggtca--t----c--------tt
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Papio_anubis.CM001492.2                               188154842 39 - 188283584 ACAAACTATCATCTAC-T---CTG---CC-AAG--AGTC--TGGCCA--T----C--------TT
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             3160 39 +      5367 acaaactatcatctac-t---ctG---CC-AAG--AGTC--TGGCCA--T----C--------TT
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47512231 39 +  47705337 acaaactatcatctac-t---ctG---CC-AAG--AGTC--TGGCCA--T----C--------TT
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 66209 39 -    104429 acaaactatcatctac-t---ctG---CC-AAG--AGTC--TGGCCA--T----C--------TT
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    4741 39 +     14967 acaaactatcatctac-t---ctG---CC-AAG--AGTC--TGGCCA--T----C--------TT
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                  602 39 -      7628 acaaactatcatctac-t---ctG---CC-AAG--AGTC--TGGCCA--T----C--------TT
i Papio_ursinus.k141_1345919                            C 0 C 0
s Perodicticus_ibeanus.k141_117958                           3654 39 -     23713 acaaactaccttttat-t---ctt-t-cc--ga--ggcc--ccttcg--a----c--------tt
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            22952 39 -     27972 acaaactaccttttat-t---ctt-t-ct--ga--ggcc--ccctcg--c----c--------tt
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      41805  9 -     45160 ------------------------------------------ATTAA--T----C--------TT
i Perognathus_longimembris.PerPac_flattened_line_22291  I 6 C 0
s Peromyscus_maniculatus.KI615518.1                       4948659 35 -   8017169 AC----GATCATACGT-T---TTC---TG-AAG--AGCC--TATTCA--T----C--------TT
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    10841 39 -     36578 acaaatcatgacctgc-c---ctt---cc-aaa--gaac--cattca--t----c--------tt
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Piliocolobus_badius.k141_1987485                            632 19 -      5908 acaaactatcaactat-t---ct------------------------------------------
i Piliocolobus_badius.k141_1987485                      C 0 I 17
s Piliocolobus_gordonorum.k141_1270531                       1251 19 -     17985 acaaactatcaactat-t---ct------------------------------------------
i Piliocolobus_gordonorum.k141_1270531                  C 0 I 17
s Piliocolobus_kirkii.k141_929665                             618 19 +      7694 acaaactatcaactat-t---ct------------------------------------------
i Piliocolobus_kirkii.k141_929665                       C 0 I 17
s Piliocolobus_tephrosceles.PDMG02000036.1               26739096 19 +  26888534 ACAAACTATCAACTAT-T---CT------------------------------------------
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 I 17
s Pithecia_albicans.k141_991845                             42227 39 -     61926 acaaactatcacctct-t---ctg---ct-aag--ggtc--tgatca--t----c--------tt
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        23656 39 +     78826 acaaactatcacctct-t---ctg---ct-aag--ggtc--tgatca--t----c--------tt
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              7607 39 -     15800 acaaactatcacctct-t---ctG---CT-AAG--GGTC--TGATCA--T----C--------TT
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        10805 39 -     16101 acaaactatcacctct-t---ctG---CT-AAG--GGTC--TGATCA--T----C--------TT
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          4114 39 +      9673 acaaactatcacctct-t---ctG---CT-AAG--GGTC--TGATCA--T----C--------TT
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13473108 39 -  19735023 ACAAACTATCACGTCT-T---CTG---CT-AAG--GGTC--TGATCA--T----C--------TT
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           12016 39 -     31692 acaaactatcacctct-t---ctG---CT-AAG--GGTC--TGATCA--T----C--------TT
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       21450 39 +     44506 ACAAACTATCACCTCT-T---CTG---TT-AAG--GGTC--TGATCA--T----C--------TT
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        21660 39 +     67491 ACAAACTATCACCTCT-T---CTG---TT-AAG--GGTC--TGATCA--T----C--------TT
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      11901 39 -     98129 acaaactatcacctct-t---ctG---TT-AAG--AGTC--TGATCA--T----C--------TT
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     21506 39 +    147771 ACAAACTATCACCGCT-T---CTG---TT-AAG--GGTC--TGATCA--T----C--------TT
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        21755 39 -     23762 ACAAACTATCACCTCT-T---CTG---TT-AAG--AGTC--TGATCA--T----C--------TT
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          2222 39 -     55515 acaaactatcacctct-t---ctG---TT-AAG--GGTC--TGATCA--T----C--------TT
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         21575 39 +    152463 acaaactatcacctct-t---ctG---TT-AAG--GGTC--TGATCA--T----C--------TT
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      8335 39 +      8943 ACAAACTATCACCTCT-T---CTG---TT-AAG--GGTC--TGATCA--T----C--------TT
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                         11295 39 +    134592 acaaactatcacctct-t---ctG---TT-AAG--GGTC--TGATCA--T----C--------TT
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          21885 39 -     75465 acaaactatcacctct-t---ctG---TT-AAG--GGTC--TGATCA--T----C--------TT
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              185790 39 -    373494 ACAAACTATCATCTAT-T---CTG---CT-AAG--GGTC--TGGTCA--T----C--------TT
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19806438 39 +  19899266 acaaactatcatctat-t---ctg---ct-aag--ggtc--tggtca--t----c--------tt
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               4353 19 -     15069 acaaactatcaactat-t---ct------------------------------------------
i Presbytis_comata.k141_672698                          C 0 I 17
s Presbytis_mitrata.k141_860013                              4487 19 +     14865 acaaactatcaactat-t---ct------------------------------------------
i Presbytis_mitrata.k141_860013                         C 0 I 17
s Prolemur_simus.MPIZ01000048.1                           6847146 38 +  12164890 ACAAACTATCACCTAT-T---CTT---C--CAG--GGCC--CGTTCA--T----C--------TT
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    666355 39 -   2312742 acaaactatcacctgt-t---ctt---ct-cag--ggcc--cattca--t----c--------tt
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         2185 39 +     11805 acaaactatcacctgt-t---ctt---ct-cag--ggcc--cattca--t----c--------tt
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           41520 39 +     52369 acaaactatcacctgt-t---ctt---ct-cag--ggcc--cattca--t----c--------tt
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         33909 39 -     44753 acaaactatcacctgt-t---ctt---ct-cag--ggcc--cattca--t----c--------tt
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            15830 39 +     27322 acaaactatcacctgt-t---ctt---ct-cag--ggcc--cattca--t----c--------tt
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       15469 39 -     53241 acaaactatcacttgt-t---ctt---ct-cag--ggcc--cattca--t----c--------tt
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         37740 39 -     48185 acaaactatcacctgt-t---ctt---ct-cag--ggcc--cattca--t----c--------tt
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           32061  9 +     77221 AG----GATGATA----------------------------------------------------
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pygathrix_cinerea.k141_374971                             28476 19 +     56732 acaaactatcaactat-t---ct------------------------------------------
i Pygathrix_cinerea.k141_374971                         C 0 I 17
s Pygathrix_nigripes_b.ctg79                                 6804967 19 +   6970761 acaaactatcaactat-t---ct------------------------------------------
i Pygathrix_nigripes_b.ctg79                               C 0 I 17
s Pygathrix_nigripes_a.k141_101123                             4361 19 +     18040 acaaactatcaactat-t---ct------------------------------------------
i Pygathrix_nigripes_a.k141_101123                        C 0 I 17
s Rattus_norvegicus.chr11                                13913996 35 +  90463843 AC----CATCATGTAT-T---TTT---CT-AAA--GGTC--CACCCA--T----C--------TT
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinopithecus_bieti.k119_1391695                            584 19 -      1866 acaaactatcaactat-t---ct------------------------------------------
i Rhinopithecus_bieti.k119_1391695                      C 0 I 17
s Rhinopithecus_roxellana.NC_044549.1                   206376241 19 - 206558726 ACAAACTATCAACTAT-T---CT------------------------------------------
i Rhinopithecus_roxellana.NC_044549.1                   C 0 I 17
s Rhinopithecus_strykeri.ctg4                            44855141 19 -  45163003 acaaactatcaactat-t---ct------------------------------------------
i Rhinopithecus_strykeri.ctg4                           C 0 I 17
s Saimiri_boliviensis.NW_024100938.1                     15671325 39 -  43202129 ACAAACTATCATGTCT-T---CTG---CT-AAG--GGTC--TGATCA--T----C--------TT
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        3242 39 +     34089 ACAAACTATCATGTCT-T---CTG---CT-AAG--GGTC--TGATCA--T----C--------TT
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              3183 39 -     60842 ACAAACTATCATGTCT-T---CTG---CT-AAG--GGTC--TGATCA--T----C--------TT
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              3278 39 +     67014 ACAAACTATCATGTCT-T---CTG---CT-AAG--GGTC--TGATCA--T----C--------TT
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              3256 39 +     60816 ACAAACTATCATGTCT-T---CTG---CT-AAG--GGTC--TGATCA--T----C--------TT
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 3193 39 -     76454 ACAAACTATCATGTCT-T---CTG---CT-AAG--GGTC--TGATCA--T----C--------TT
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17339897 39 -  30362882 ACAAACTATCACGTCT-T---CTG---CT-AAG--GGTC--TGATCA--T----C--------CT
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         19272 39 -     62485 ACAAACTATCACGTCT-T---CTG---CT-AAG--GGTC--TGATCA--T----C--------CT
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Semnopithecus_entellus.k141_1572367                        1968 19 +     15331 ACAAACTGTCAACTAT-T---CT------------------------------------------
i Semnopithecus_entellus.k141_1572367                   C 0 I 17
s Semnopithecus_hypoleucos.k141_761524                       7365 19 +     20762 acaaactatcaactat-t---ct------------------------------------------
i Semnopithecus_hypoleucos.k141_761524                  C 0 I 17
s Semnopithecus_johnii.k141_785014                         117363 19 +    130994 acaaactatcaactat-t---ct------------------------------------------
i Semnopithecus_johnii.k141_785014                      C 0 I 17
s Semnopithecus_priam.k141_410937                           36154 19 +     46263 acaaactatcaactat-t---ct------------------------------------------
i Semnopithecus_priam.k141_410937                       C 0 I 17
s Semnopithecus_schistaceus.k141_387461                     29268 19 +     42640 ACAAACTGTCAACTAT-T---CT------------------------------------------
i Semnopithecus_schistaceus.k141_387461                 C 0 I 17
s Semnopithecus_vetulus.k141_1143185                        12317 19 +     30600 acaaactatcaactat-t---ct------------------------------------------
i Semnopithecus_vetulus.k141_1143185                    C 0 I 17
s Sigmodon_hispidus.SigHis_scaffold_11332                   98252 35 -    120886 aa----tactgtaagg-g---atc---tg-atg--ggtc--cactca--t----c--------tt
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2238518 41 +   2842873 ACAAATGATTCCCTAG-T---TTT---CT-AAG--GACCTCCTTGCA--G----C--------TT
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        13518 39 -  13920577 acaaactatcatctat-t---ctg---ct-aag--ggtc--tggtca--t----c--------tt
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tarsius_lariang.k141_609102                               25092 39 +     42269 gcaaactatcagctgt-t---cct---tt-aag--ggca--taatca--t----c--------tt
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               58408 39 +     65473 gcaaactatcagctgt-t---cct---tt-aag--ggca--taatca--t----c--------tt
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194006370 39 - 194193292 ACAAACTATCATCTAC-T---CTG---CC-AAG--AGTC--TGGCCA--T----C--------TT
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             37891 39 -     47444 gcaaatcattacccgc-t---ctt---ct-aaa--gacc--cattct--t----c--------tt
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Trachypithecus_auratus.k141_738098                        25475 19 +     38948 acaaactatcaactat-t---ct------------------------------------------
i Trachypithecus_auratus.k141_738098                    C 0 I 17
s Trachypithecus_crepusculus.k141_1588528                   19202 19 -     32910 acaaactatcaactat-t---ct------------------------------------------
i Trachypithecus_crepusculus.k141_1588528               C 0 I 17
s Trachypithecus_cristatus.k141_1011511                       589 19 -     12939 acaaactatcaactat-t---ct------------------------------------------
i Trachypithecus_cristatus.k141_1011511                 C 0 I 17
s Trachypithecus_francoisi.k141_768164                        529 19 -     14244 acaaactatcaactat-t---ct------------------------------------------
i Trachypithecus_francoisi.k141_768164                  C 0 I 17
s Trachypithecus_geei.k141_670367                           41922 19 -     54611 acaaactatcaactat-t---ct------------------------------------------
i Trachypithecus_geei.k141_670367                       C 0 I 17
s Trachypithecus_germaini.k141_878600                         752 19 +      1165 acaaactatcaactat-t---ct------------------------------------------
i Trachypithecus_germaini.k141_878600                   C 0 I 17
s Trachypithecus_hatinhensis.k141_504423                     1900 19 -     15592 acaaactatcaactat-t---ct------------------------------------------
i Trachypithecus_hatinhensis.k141_504423                C 0 I 17
s Trachypithecus_laotum.k141_760702                           557 19 +     14371 acaaactatcaactat-t---ct------------------------------------------
i Trachypithecus_laotum.k141_760702                     C 0 I 17
s Trachypithecus_leucocephalus.k141_283605                  50314 19 +     51589 acaaactatcaactat-t---ct------------------------------------------
i Trachypithecus_leucocephalus.k141_283605              C 0 I 17
s Trachypithecus_melamera.k141_238507                       13490 19 +     14732 acaaactatcaactat-t---ct------------------------------------------
i Trachypithecus_melamera.k141_238507                   C 0 I 17
s Trachypithecus_obscurus.k141_1115109                       3967 19 -     28054 acaaactatcaactat-t---ct------------------------------------------
i Trachypithecus_obscurus.k141_1115109                  C 0 I 17
s Trachypithecus_phayrei.ctg3                            44658762 19 -  44834318 acaaactatcaactat-t---ct------------------------------------------
i Trachypithecus_phayrei.ctg3                           C 0 I 17
s Trachypithecus_pileatus.k141_1022309                       1065 19 +     13828 acaaactatcaactat-t---ct------------------------------------------
i Trachypithecus_pileatus.k141_1022309                  C 0 I 17
s Tupaia_chinensis.KB320831.1                             2791239 37 -   3938065 --AGACTATCCCTTAT-T---TTC---CT-AAG--AACC--TACTTG--T----G--------TT
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    3498 37 +     13056 --agactatcacttat-t---ttc---ct-aag--aacc--tacttg--t----g--------tt
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Varecia_rubra.k141_432109                                  3851 39 -     20643 acaaactaacacctat-t---ctt---ct-gag--agcc--cattca--t----c--------tt
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             23393 39 -     33872 acaaactaacacctat-t---ctt---ct-gag--agcc--cattca--t----c--------tt
i Varecia_variegata.k141_775891                         C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       125620 39 -    134049 ACAAATGACCAGGTAT-T---TTT---CT-GAG--GACT--GGTTCC--T----C--------TT
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     13856 20 -     20485 -----------------------c---ct-tat--ggtc--tactca--t----c--------tt
i Zapus_hudsonius.ZapHud_scaffold_64392                 I 16 C 0
e Eptesicus_fuscus.JH977687.1                             4702143 415 +   6522550 I
e Macroglossus_sobrinus.MacSob_scaffold_879                699974 431 +    802869 I
e Sorex_araneus.JH798170.1                               17748590 843 -  27805282 I
e Erinaceus_europaeus.JH835290.1                         11530833 462 +  16010500 I
e Chaetophractus_vellerosus.ChaVel_scaffold_1070855          1230  0 -      1715 I
e Suricata_suricatta.SurSur_flattened_line_20339            25319 430 +     62062 I
e Ziphius_cavirostris.ZipCav_flattened_line_127025           5301 442 -      8775 I
e Zalophus_californianus.ZalCal_flattened_line_4097        212018 448 -    227762 I
e Vulpes_lagopus.VulLag_flattened_line_2045                135489 449 -    281493 I
e Vicugna_pacos.KN269600.1                                1523037 433 -   2331223 I
e Ursus_maritimus.KK498671.1                              6512543 460 +  28682327 I
e Uropsilus_gracilis.UroGra_scaffold_4143_0                 24925  0 -     25548 I
e Tursiops_truncatus.MRVK01000923.1                      69311805 441 -  96451834 I
e Trichechus_manatus.JH594618.1                          16079679 1700 +  31416278 I
e Tragulus_javanicus.TraJav_scaffold_14717                   3584 419 +     90398 I
e Tonatia_saurophila.TonSau_scaffold_3334                  134241 421 -    259118 I
e Tolypeutes_matacus.TolMat_scaffold_269431                  1990 2406 +      6782 I
e Tapirus_terrestris.TapTer_scaffold_14939                  55756 434 +     99546 I
e Tapirus_indicus.TapInd_scaffold_176                      805095 435 +   1148477 I
e Tamandua_tetradactyla.TamTet_scaffold_26877               13106 433 +     45698 I
e Tadarida_brasiliensis.TadBra_scaffold_145589               4174 407 -      6213 I
e Sus_scrofa.CM000824.4                                 189270228 447 + 218635234 I
e Spilogale_gracilis.SpiGra_flattened_line_905             232751 445 -    276980 I
e Solenodon_paradoxus.SolPar_flattened_line_1012            16376 416 +    739146 I
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   29737 434 -    114521 I
e Saiga_tatarica.SaiTat_scaffold_82192                       5983 428 +     12214 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                17647 435 +    109198 I
e Rhinolophus_sinicus.LVEH01000179.1                      1786172 430 +   2252614 I
e Rangifer_tarandus.RanTarSib_scaffold_24239                14178 431 +     68503 I
e Puma_concolor.QAVW01000427.1                          131532079 431 - 161321710 I
e Pteropus_vampyrus.KN525959.1                             602305 437 -   3946241 I
e Pteropus_alecto.KB031157.1                             13244354 438 -  17261082 I
e Pteronura_brasiliensis.PteBra_flattened_line_1343        243991 454 -    344369 I
e Pteronotus_parnellii.KE867983.1                            2230 422 -     27784 I
e Procavia_capensis.ProCapCap_scaffold_15315                74302 1939 +     78963 I
e Platanista_gangetica.PlaMin_flattened_line_72990           3771 443 +     21690 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            95224 410 +    112873 I
e Phocoena_phocoena.PhoPho_flattened_line_11948            119703 443 -    122454 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113416 447 -    135482 I
e Pantholops_hodgsonii.KE114631.1                         1064538 417 -   1292953 I
e Panthera_tigris.KE721879.1                              5025497 431 -   6340057 I
e Panthera_pardus.KV860323.1                              3635849 432 +  18214204 I
e Panthera_onca.PanOnc_flattened_line_1615                  32116 431 +    295523 I
e Ovis_canadensis.OviCan_scaffold_6251                      76891 417 +    140051 I
e Ovis_aries.CM001582.2                                 134075677 417 - 275406953 I
e Otocyon_megalotis.JAEUCK010005121.1                      305421 444 -    505867 I
e Orycteropus_afer.OryAfe_flattened_line_13509              41471 1764 -     66828 I
e Orcinus_orca.KB316965.1                                 7223086 443 -   7562323 I
e Okapia_johnstoni.LVCL01S0017931.1                         35255 573 +     78940 I
e Odocoileus_virginianus.KZ101650.1                       1078100 432 +   1425656 I
e Odobenus_rosmarus.KB229369.1                             677288 443 -   3126709 I
e Nyctereutes_procyonoides.CAJHUB010000786.1                28082 449 +   3668941 I
e Noctilio_leporinus.NocLep_scaffold_12062                  47676 415 +     94413 I
e Neophocaena_asiaeorientalis.KZ688543.1                  3949402 443 -   4490290 I
e Neomonachus_schauinslandi.NINY01007774.1                4482632 454 -  14209539 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3432 432 -      8794 I
e Myotis_myotis.MyoMyo_scaffold_6123                         8554 416 +     66751 I
e Myotis_lucifugus.GL429887.1                             3463359 417 -   3747815 I
e Myotis_davidii.KB114863.1                               5017463 416 +   6462685 I
e Myotis_brandtii.KE161952.1                               965772 418 +   8389877 I
e Mustela_putorius.JH417978.1                             4421898 453 -  28371801 I
e Murina_feae.MurFea_scaffold_2254                          17451 414 -    100666 I
e Mungos_mungo.MunMun_flattened_line_8729                  142653 430 -    168139 I
e Moschus_moschiferus.MosMos_scaffold_146101                 2972 432 -      4346 I
e Mormoops_blainvillei.MorMeg_scaffold_2952                159560 424 +    265003 I
e Monodon_monoceros.MonMon_M_scaffold_5598                 144790 442 +    154973 I
e Mirounga_angustirostris.MirAng_flattened_line_8852         9033 661 -    104932 I
e Miniopterus_schreibersii.MinSch_scaffold_24116            32480 421 +     45743 I
e Miniopterus_natalensis.LDJU01000022.1                   8207809 420 +  10048721 I
e Micronycteris_hirsuta.MicHir_scaffold_37978               21050 428 -     32043 I
e Microgale_talazaci.MicTal_scaffold_34660                  29351 1133 -     48017 I
e Mellivora_capensis.MelCap_flattened_line_146202             327 452 -      1999 I
e Megaderma_lyra.MegLyr_scaffold_3562                       62628 576 -    234502 I
e Manis_pentadactyla.KN017078.1                             34538 441 +     58827 I
e Manis_javanica.JSZB01003966.1                            144466 438 +    252755 I
e Lycaon_pictus.CM007556.1                               11085089 449 +  39895028 I
e Loxodonta_africana.GL010040.1                          20589215 1702 -  62548349 I
e Lipotes_vexillifer.KE558548.1                            134353 444 +   3060487 I
e Leptonychotes_weddellii.KB714749.1                      3083728 458 -   3498232 I
e Lasiurus_borealis.LasBor_scaffold_5102                   111937 417 -    115756 I
e Kogia_breviceps.KogBre_flattened_line_35920               22021 443 +     37189 I
e Inia_geoffrensis.IniGeo_flattened_line_66725               7195 437 +     17520 I
e Hyaena_hyaena.HyaHya_flattened_line_20729                 14013 474 -     67322 I
e Hipposideros_galeritus.HipGal_scaffold_104691              5946 409 -      9143 I
e Hipposideros_armiger.JXIK01001085.1                      276788 408 -    477199 I
e Hippopotamus_amphibius.HipAmp_scaffold_1308              145449 430 +    277961 I
e Heterohyrax_brucei.HetBruBak_scaffold_25354               54438 1939 +     73687 I
e Hemitragus_hylocrius.HemHyl_scaffold_16669                25884 416 -     91191 I
e Helogale_parvula.HelPar_flattened_line_22962              14960 432 +     53719 I
e Giraffa_tippelskirchi.LVKQ01S012154.1                    179385 717 -    189561 I
e Felis_nigripes.FelNig_flattened_line_8080                 18925 427 +     52776 I
e Felis_catus_fca126.CM031420.1                         129277790 427 - 158578461 I
e Eubalaena_japonica.EubJap_flattened_line_7756             59838 466 +     89355 I
e Eschrichtius_robustus.EscRob_flattened_line_685          313408 442 +    330699 I
e Equus_przewalskii.ATBW01073585.1                          11036 704 +     92910 I
e Equus_caballus.CM000402.2                              13349546 704 +  41866177 I
e Equus_asinus.JREZ01000062.1                             5851044 703 -   7175178 I
e Enhydra_lutris.KZ291749.1                              85869516 453 +  99434291 I
e Elephantulus_edwardii.JH947210.1                        7804622 10712 +  15467074 I
e Elaphurus_davidianus.JRFZ01086400.1                     1489870 432 +   1727528 I
e Eidolon_helvum.KE772537.1                                 10556 435 +     24177 I
e Echinops_telfairi.JH980316.1                           22994071  0 -  44670279 C
e Diceros_bicornis.DicBicMic_scaffold_9545                    953 1024 +    151128 I
e Dicerorhinus_sumatrensis.PEKH010003161.1                 320309 1016 +    993696 I
e Desmodus_rotundus.KZ672188.1                           18697183 419 -  18957592 I
e Delphinapterus_leucas.KZ290064.1                       80035206 438 -  96802777 I
e Dasypus_novemcinctus.JH568778.1                          180040 2424 -   6883506 I
e Cryptoprocta_ferox.CryFer_flattened_line_19014            49751 433 -     70449 I
e Crocidura_indochinensis.CroInd_scaffold_38409             18067 408 -     19186 I
e Craseonycteris_thonglongyai.CraTho_scaffold_22679         37588 826 -     40477 I
e Condylura_cristata.JH655880.1                          60611131 297 +  78930452 I
e Choloepus_hoffmanni.KN194586.1                           760141 439 +    964067 I
e Choloepus_didactylus.ChoDid_scaffold_36182                14830 439 -     21363 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_160623         1406 1024 -      9338 I
e Catagonus_wagneri.CatWag_scaffold_1305                   157166 412 -    276539 I
e Carollia_perspicillata.CarPer_scaffold_4436               57873 420 +     67245 I
e Capra_hircus.CM004562.1                               135704839 417 - 157403528 I
e Capra_aegagrus.CM003214.1                              21323612 417 + 157394656 I
e Canis_lupus_orion.HG994411.1                           16452657 449 -  44759192 I
e Canis_lupus_familiaris.chr31                           11085633 449 +  39895921 I
e Canis_lupus_dingo.QKWQ01001993.1                       11263104 449 -  35597290 I
e Canis_lupus_VD.CanFam_VD_scaffold_16982                   11461 449 +     87036 I
e CanFam4.chr31                                          11516443 449 +  39901454 I
e Camelus_ferus.KB016973.1                                2971365 436 +   6889770 I
e Camelus_dromedarius.KN271192.1                           395631 437 -  15254737 I
e Camelus_bactrianus.KN276303.1                           3217927 436 -   8989139 I
e Bubalus_bubalis.KI419065.1                              1229342 431 -   1914593 I
e Bos_taurus.CM000177.6                                 136293586 432 - 158972876 I
e Bos_mutus.JH883513.1                                     570227 432 -    998990 I
e Bos_indicus.CM003021.1                                138137853 432 - 161108492 I
e Bison_bison.KN264915.1                                  6557614 432 +   6870073 I
e Beatragus_hunteri.BeaHun_scaffold_21644                   41603 412 -     72089 I
e Balaenoptera_bonaerensis.DF502048.1                        3753 444 -     13118 I
e Balaenoptera_acutorostrata.KI537095.1                  26378522 443 +  51448160 I
e Artibeus_jamaicensis.ArtJam_scaffold_41619                 7075 421 -     29036 I
e Antilocapra_americana.AntAmePen_scaffold_42841            29107 427 +     33004 I
e Anoura_caudifer.AnoCau_scaffold_422                      388679 416 -    631301 I
e Ammotragus_lervia.NIVO01013474.1                        3518508 445 +   4113121 I
e Ailurus_fulgens.LNAC01000003.1                          7091784 657 -  16596857 I
e Ailuropoda_melanoleuca.LNAT01000321.1                  10655057 459 +  23371972 I
e Acinonyx_jubatus.LLWD01000356.1                         2031739 430 +   3721120 I
e Hylobates_pileatus_a.tarseq_592                             30921 2351 -     60944 I
e Hylobates_pileatus_b.ContigUN                                 14622428 998 -  25970782 I
e Hylobates_muelleri.k141_1133650                            2317  0 -      2775 I
e Hylobates_klossii.k141_466549                              9327 960 +     11537 I
e Hylobates_agilis.k141_1485652                              1303  0 -      1697 I
e Hylobates_abbotti.k141_493872                              2882 965 +      5897 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               10544  7 +    209709 tccc-a-a--------a
s Allactaga_bullata.AllBul_scaffold_70162                   11559  7 -     22067 cccc-c-c--------a
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_3103728                   1151  7 +      1665 tccc-a-a--------a
i Allenopithecus_nigroviridis.k141_3103728              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                          637  3 -     29318 TCC--------------
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_21674                            854  3 -      1421 TCC--------------
i Allochrocebus_preussi.k141_21674                      C 0 I 44
s Allochrocebus_solatus.k141_371672                           531  3 -     80423 TCC--------------
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             8810  7 -     18050 TCCC-A-A--------A
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  9923  7 -     11521 TCCC-A-A--------A
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              9487  7 -     21359 TCCC-A-A--------A
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_298055                                  778  7 +      1823 TCCC-A-A--------A
i Alouatta_juara.k141_298055                            C 0 C 0
s Alouatta_macconnelli.k141_1331706                          8778  7 -     10438 TCCC-A-A--------A
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            5434  7 +      7047 TCCC-A-A--------A
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             8719  7 +     10410 TCCC-A-A--------A
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            2524  7 -      4927 TCCC-A-A--------A
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             5453  7 +      6429 TCCC-A-A--------A
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Aotus_azarae.k141_3170768                                 61176  7 +     78111 t-ccca-a--------a
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            4117  7 +     22701 t-ccca-a--------a
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5748074  7 +   9889416 T-CCCA-A--------A
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             4659  7 -    104377 t-ccca-a--------a
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               4665  7 +     23246 t-ccca-a--------a
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     2489  7 +      5067 tctc-t-c--------c
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      16466  6 +     17483 T-CC-C-C--------A
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9537910  7 +  39197703 TCCC-A-A--------A
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             59194  7 +     85812 TCCC-A-A--------A
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                10193  7 +     89302 TCCC-A-A--------A
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             14698  7 -     58268 TCCC-A-A--------A
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             62689  7 +    119057 TCCC-A-A--------A
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               4658  7 -     25888 TCCC-A-A--------A
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 5298  7 -     16375 ttcc-c-c--------a
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              1617  7 +      2719 ttcc-c-c--------a
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Cacajao_ayresi.k141_724503                               112552  7 -    171031 tccc-a-a--------a
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 11578  7 +    125063 tccc-a-a--------a
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                13626  7 -    216513 tccc-a-a--------a
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        6166  7 -    134917 tccc-a-a--------a
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Capromys_pilorides.CapPil_scaffold_979108                   595  7 -      1248 TCCC-A-A--------A
i Capromys_pilorides.CapPil_scaffold_979108             I 39 C 0
s Carlito_syrichta.NW_007248099.1                          307648  7 +    345090 TCCC-A-A--------A
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   29079  7 +     33760 tccc-c-c--------a
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15785233  3 -  24422027 TCC--------------
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15797167  3 -  24440124 tcc--------------
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       175358  3 +    436027 tcc--------------
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18889409  6 -  29618158 tct--g-a--------a
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 6953  6 -     26817 TCT--G-A--------A
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                11193  6 +     25043 TCT--G-A--------A
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         6681  7 +     21754 tccc-a-a--------a
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6553843  3 +   6739814 TCC--------------
i Cercocebus_atys.KQ010443.1                            C 0 I 10
s Cercocebus_chrysogaster.k141_2328246                      25320  3 +     60454 TCC--------------
i Cercocebus_chrysogaster.k141_2328246                  C 0 I 10
s Cercocebus_lunulatus.k141_4634644                           525  3 -     21101 TCC--------------
i Cercocebus_lunulatus.k141_4634644                     C 0 I 10
s Cercocebus_torquatus.k141_3969582                         57835  3 -    107033 TCC--------------
i Cercocebus_torquatus.k141_3969582                     C 0 I 10
s Cercopithecus_ascanius.k141_4123525                         736  7 -     17608 TCCC-A-A--------A
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          28234  7 +     30494 TCCC-A-A--------A
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          57077  7 -     59240 TCCC-A-A--------A
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                           778  7 +     16677 TCCC-A-A--------A
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           22936  7 +     35983 TCCC-A-A--------A
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11989467  7 +  12117833 TCCC-A-A--------A
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46476222  7 +  46592721 TCCC-A-A--------A
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      39773  7 -     45581 TCCC-A-A--------A
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                        782  7 +     35577 TCCC-A-A--------A
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                         555  7 -     25661 TCCC-A-A--------A
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                         533  7 -     17744 TCCC-A-A--------A
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        20142  7 +     37128 TCCC-A-A--------A
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           57601  7 -     68416 tgct-c-c--------a
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            6644  7 +     13308 tgcc-c-c--------a
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             4202  7 -     18223 TCTC-A-A--------A
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             21225  7 +     25473 TCTC-A-A--------A
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           40260  7 +     57117 TCTC-A-A--------A
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          44939  7 +     54541 TCTC-A-A--------A
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15960383  7 +  43084221 tccc-a-a--------g
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         69761  7 +    196370 tccc-a-a--------a
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          13941  7 +     40510 tccc-a-a--------a
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15137697  3 -  15256731 TCC--------------
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      32744  3 -     53260 TCC--------------
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101143307  3 + 101219884 TCC--------------
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10885062  7 +  10971483 TCCC-A-A--------A
i Colobus_angolensis.KN985967.1                         I 17 C 0
s Colobus_guereza.LG08                                  147663226  7 + 156195979 tccc-a-a--------a
i Colobus_guereza.LG08                                  I 17 C 0
s Colobus_polykomos.k141_1406057                            15210  7 +     23629 tccc-a-a--------a
i Colobus_polykomos.k141_1406057                        I 17 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 276972  7 -    399297 gctc-c-c--------a
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53027626  7 +  72327488 GCTC-T-G--------A
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  206800  7 -    956709 tctg-a-a--------a
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 29356  7 -     67205 tcca-a-a--------a
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                16390  5 +     26546 tccc-a-----------
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             57488  7 -    236241 tgcc-a-g--------a
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16843459  7 +  31942871 tccc-c-c--------a
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   156273  7 +    228994 tccc-a-a--------a
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3654611  7 +   4240102 TTCC-C-C--------A
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 26249  7 +     28912 TCCC-C-C--------A
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                34736  3 -     73477 tcc--------------
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        238279  7 -    369425 GTTC-T-G--------A
i Ellobius_lutescens.LOEQ01003611.1                     C 0 I 13
s Ellobius_talpinus.LOJH01090055.1                           5295  7 -      7838 GTTC-T-G--------A
i Ellobius_talpinus.LOJH01090055.1                      C 0 I 13
s Erythrocebus_patas.Contig8                             48769877  3 -  48907691 TCC--------------
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eulemur_albifrons.k141_715837                              3644  7 +     13586 tccc-c-c--------a
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               3579  7 -      6809 tccc-c-c--------a
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            10054  7 +     36558 tccc-c-c--------a
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             6370  7 +     60246 tccc-c-c--------a
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 9852  7 +    109717 tccc-c-c--------a
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               14232  7 +     16540 tccc-c-c--------a
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                14504  7 +     27497 tccc-c-c--------a
i Eulemur_mongoz.k141_825972                            I 17 C 0
s Eulemur_rubriventer.k141_411740                           16964  7 +     26808 tccc-c-c--------a
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                31697  7 +     46535 tccc-c-c--------a
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              14420  7 -     29447 tccc-c-c--------a
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Fukomys_damarensis.KN123630.1                          13891338  7 -  19261668 TCTC-A-A--------A
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     209551  7 -    847004 ttct-c-c--------c
i Galago_moholi.ctg555                                  I 15 C 0
s Galago_senegalensis.k141_964197                           11930  7 -     43889 ttct-c-c--------c
i Galago_senegalensis.k141_964197                       I 15 C 0
s Galagoides_demidoff.k141_1769638                           9003  7 +     27357 tttt-c-c--------c
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               154902  7 +    324696 tctc-c-a--------a
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           11283  7 -     18683 cctc-a-a--------a
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               3944  7 -     14630 tccc-a-a--------a
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119651043  7 - 195582420 tccc-a-a--------a
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   76028  7 +    118900 tctt-a-a--------a
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                          468  7 +     10286 tccc-c-c--------a
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_1254239                            8618  7 +      9690 tctc-c-c--------a
i Hapalemur_gilberti.k141_1254239                       C 0 C 0
s Hapalemur_griseus.k141_1387522                             4247  7 +     56096 tccc-c-c--------a
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        27523  7 -     42470 tccc-c-c--------a
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        44121  7 -     54384 tccc-c-c--------a
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2549730  7 +  31725842 tccc-a-a--------a
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Hoolock_leuconedys.ctg903                                     5073  7 -     61166 TCCC-A-A--------A
i Hoolock_leuconedys.ctg903                                I 41 I 277
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           17637  3 -    119109 tcc--------------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     4783  7 +     22540 tccc-a-a--------a
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7124643  7 +  13083262 TCCC-T-G--------A
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_1884019                                   1893  7 -      2196 tccc-c-c--------a
i Indri_indri.k141_1884019                              C 0 C 0
s Jaculus_jaculus.JH725517.1                              8564303  7 +  11848649 CCCC-T-C--------A
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Lagothrix_lagothricha.k141_12968                          48779  7 -    147782 TCCC-A-A--------A
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lemur_catta.scaffold_1                                258405803  7 - 285822530 tccc-c-c--------a
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        22574  7 +     39228 tccc-c-c--------a
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            51949  7 +     63517 tccc-c-c--------a
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        77192  7 +    116806 tccc-c-c--------a
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     30213  7 -     33031 tccc-c-c--------a
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    11629  6 +     22452 tcca-a-a---------
i Lepus_americanus.LepAme_scaffold_62849                C 0 I 5
s Lophocebus_aterrimus.ctg55                             19246932  3 +  19376315 TCC--------------
i Lophocebus_aterrimus.ctg55                            C 0 I 10
s Loris_lydekkerianus.k141_550999                            9316  6 +     84689 c-cc-c-c--------a
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3777065  6 +   6799190 c-cc-c-c--------a
i Loris_tardigradus.ctg97                               C 0 C 0
s Macaca_arctoides.k141_2201161                             18621  3 +     74745 TCC--------------
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12705138  3 +  12821369 TCC--------------
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                 783  3 -      3136 TCC--------------
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           45534  3 +     63263 TCC--------------
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                  300  3 -      2568 TCC--------------
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                  808  3 -      7381 TCC--------------
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  44045  3 -     79256 TCC--------------
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196034215  3 + 196197964 tcc--------------
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11444320  3 +  11645122 tcc--------------
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   2992  3 -     46448 TCC--------------
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                 664  3 -     13212 TCC--------------
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 14406  3 -     55006 TCC--------------
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43839443  3 +  43892939 TCC--------------
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               15693  3 -     24607 TCC--------------
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               2997  3 -     27140 TCC--------------
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43436091  3 -  43563597 TCC--------------
i Mandrillus_leucophaeus.scaffold125                    C 0 I 10
s Mandrillus_sphinx.Contig144                             4448917  3 -   4543643 tcc--------------
i Mandrillus_sphinx.Contig144                           C 0 I 10
s Marmota_marmota.CZRN01000005.1                         36872478  7 +  64221397 TCCC-T-G--------A
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1045364  7 -  26018355 GCTC-T-G--------A
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Microcebus_murinus.CM007691.1                          16508817  7 +  47401472 tccc-t-c--------a
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22818485  7 -  98408828 GTTC-T-G--------A
i Microtus_ochrogaster.CM001673.1                       C 0 I 13
s Miopithecus_ogouensis.k141_2935907                          644  7 +     29742 TCCC-A-A--------A
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirza_zaza.k141_226143                                     4216  7 +      8497 tccc-t-c--------a
i Mirza_zaza.k141_226143                                C 0 C 0
s Mus_caroli.LT608236.1                                  70764988  3 +  92629107 gct--------------
i Mus_caroli.LT608236.1                                 I 30 C 0
s Mus_musculus.chr16                                     75488025  3 +  98207768 GCT--------------
i Mus_musculus.chr16                                    I 31 C 0
s Mus_pahari.LT608305.1                                  67554266  3 +  89017189 gct--------------
i Mus_pahari.LT608305.1                                 I 30 C 0
s Mus_spretus.CM004110.1                                 74329204  3 +  97876770 GCT--------------
i Mus_spretus.CM004110.1                                I 30 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              9769  7 +     98495 tctc-a-a--------a
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     88660  7 -    117718 tccc-a-a--------a
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Nannospalax_galili.KL201303.1                            116788  8 +    362372 TCTC-TCC--------A
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               7145  7 +     48152 TCCC-A-A--------A
i Nasalis_larvatus.k141_153429                          I 17 C 0
s Nomascus_annamensis.k141_302224                             604  7 +      1516 tccc-a-a--------a
i Nomascus_annamensis.k141_302224                       I 39 I 50
s Nomascus_concolor.k141_49591                               1725  7 +      2014 tccc-a-a--------a
i Nomascus_concolor.k141_49591                          C 0 C 0
s Nomascus_gabriellae.k141_642452                             650  7 +      2851 tccc-a-a--------a
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             23565  7 -  18771707 tccc-a-a--------a
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  1278  7 +      4512 tccc-a-a--------a
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nycticebus_bengalensis.LG16                            65565758  6 -  95554990 T-GC-C-C--------A
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            2487  6 +      6470 t-gc-c-c--------a
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65668095  6 +  89412551 t-gc-c-c--------a
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4994626 14 -  23139505 CCTC-C-AGGGA-AGCA
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3684196  7 +  10294119 TCCC-A-A--------A
i Octodon_degus.JH651621.1                              C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  123750  7 +    145789 GCTC-T-G--------A
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  35503  7 +     62360 gctc-t-g--------a
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141874269 15 + 163896628 CCCA-A-ACCCACACCA
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       37645  7 +     38679 ttct-c-c--------c
i Otolemur_crassicaudatus.k141_321880                   I 15 C 0
s Otolemur_garnettii.GL873528.1                          18007073  7 -  38779656 TTCT-C-C--------C
i Otolemur_garnettii.GL873528.1                         I 15 C 0
s Pan_paniscus.CM003386.1                               127573287  7 - 205426864 TCCC-A-A--------A
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120150440  7 - 196562556 tccc-a-a--------a
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Papio_anubis.CM001492.2                               188154881  3 - 188283584 TCC--------------
i Papio_anubis.CM001492.2                               C 0 I 10
s Papio_cynocephalus.k141_883042                             3199  3 +      5367 TCC--------------
i Papio_cynocephalus.k141_883042                        C 0 I 10
s Papio_hamadryas.Contig15                               47512270  3 +  47705337 TCC--------------
i Papio_hamadryas.Contig15                              C 0 I 10
s Papio_kindae.k141_5458022                                 66248  3 -    104429 TCC--------------
i Papio_kindae.k141_5458022                             C 0 I 10
s Papio_papio.k141_979496                                    4780  3 +     14967 TCC--------------
i Papio_papio.k141_979496                               C 0 I 10
s Papio_ursinus.k141_1345919                                  641  3 -      7628 TCC--------------
i Papio_ursinus.k141_1345919                            C 0 I 10
s Perodicticus_ibeanus.k141_117958                           3693  6 -     23713 t-cc-c-c--------a
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            22991  6 -     27972 t-cc-c-c--------a
i Perodicticus_potto.k141_713187                        C 0 T 2214
s Perognathus_longimembris.PerPac_flattened_line_22291      41814  7 -     45160 TTCT-C-C--------A
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4948694  7 -   8017169 GCTC-T-G--------A
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    10880  7 -     36578 tccc-a-g--------a
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Piliocolobus_badius.k141_1987485                            668  7 -      5908 TCCC-A-A--------A
i Piliocolobus_badius.k141_1987485                      I 17 C 0
s Piliocolobus_gordonorum.k141_1270531                       1287  7 -     17985 TCCC-A-A--------A
i Piliocolobus_gordonorum.k141_1270531                  I 17 C 0
s Piliocolobus_kirkii.k141_929665                             654  7 +      7694 TCCC-A-A--------A
i Piliocolobus_kirkii.k141_929665                       I 17 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26739132  7 +  26888534 TCCC-A-A--------A
i Piliocolobus_tephrosceles.PDMG02000036.1              I 17 C 0
s Pithecia_albicans.k141_991845                             42266  7 -     61926 tccc-a-a--------a
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        23695  7 +     78826 tccc-a-a--------a
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              7646  7 -     15800 TCCC-A-A--------A
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        10844  7 -     16101 TCCC-A-A--------A
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          4153  7 +      9673 TCCC-A-A--------A
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13473147  7 -  19735023 TCCC-A-A--------A
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           12055  7 -     31692 TCCC-A-A--------A
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       21489  7 +     44506 TCTC-A-A--------A
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        21699  7 +     67491 TCTC-A-A--------A
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      11940  7 -     98129 TCTC-A-A--------A
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     21545  7 +    147771 TCTC-A-A--------A
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        21794  7 -     23762 TCTC-A-A--------A
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          2261  7 -     55515 TCTC-A-A--------A
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         21614  7 +    152463 TCTC-A-A--------A
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      8374  7 +      8943 TCTC-A-A--------A
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                         11334  7 +    134592 TCTC-A-A--------A
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          21924  7 -     75465 TCTC-A-A--------A
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              185829  7 -    373494 TCCC-A-A--------A
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19806477  7 +  19899266 tccc-a-a--------a
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               4389  7 -     15069 TCCC-A-A--------A
i Presbytis_comata.k141_672698                          I 17 C 0
s Presbytis_mitrata.k141_860013                              4523  7 +     14865 TCCC-A-A--------A
i Presbytis_mitrata.k141_860013                         I 17 C 0
s Prolemur_simus.MPIZ01000048.1                           6847184  7 +  12164890 TCCC-C-C--------A
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    666394  7 -   2312742 tccc-c-c--------a
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         2224  7 +     11805 tccc-c-c--------a
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           41559  7 +     52369 tccc-c-c--------a
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         33948  7 -     44753 tccc-c-c--------a
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            15869  7 +     27322 tccc-c-c--------a
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       15508  7 -     53241 tccc-c-c--------a
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         37779  7 -     48185 tccc-c-c--------a
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Pygathrix_cinerea.k141_374971                             28512  7 +     56732 tccc-a-a--------a
i Pygathrix_cinerea.k141_374971                         I 17 C 0
s Pygathrix_nigripes_b.ctg79                                 6805003  7 +   6970761 tccc-a-a--------a
i Pygathrix_nigripes_b.ctg79                               I 17 C 0
s Pygathrix_nigripes_a.k141_101123                             4397  7 +     18040 tccc-a-a--------a
i Pygathrix_nigripes_a.k141_101123                        I 17 C 0
s Rattus_norvegicus.chr11                                13914031  3 +  90463843 GCT--------------
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinopithecus_bieti.k119_1391695                            620  7 -      1866 TCCC-A-A--------A
i Rhinopithecus_bieti.k119_1391695                      I 17 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206376277  7 - 206558726 TCCC-A-A--------A
i Rhinopithecus_roxellana.NC_044549.1                   I 17 C 0
s Rhinopithecus_strykeri.ctg4                            44855177  7 -  45163003 TCCC-A-A--------A
i Rhinopithecus_strykeri.ctg4                           I 17 C 0
s Saimiri_boliviensis.NW_024100938.1                     15671364  7 -  43202129 TCCC-G-A--------A
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        3281  7 +     34089 TCCC-G-A--------A
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              3222  7 -     60842 TCCC-G-A--------A
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              3317  7 +     67014 TCCC-G-A--------A
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              3295  7 +     60816 TCCC-G-A--------A
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 3232  7 -     76454 TCCC-G-A--------A
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17339936  6 -  30362882 TCT--G-A--------A
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         19311  6 -     62485 TCT--G-A--------A
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Semnopithecus_entellus.k141_1572367                        2004  7 +     15331 tccc-a-a--------a
i Semnopithecus_entellus.k141_1572367                   I 17 C 0
s Semnopithecus_hypoleucos.k141_761524                       7401  7 +     20762 tccc-a-a--------a
i Semnopithecus_hypoleucos.k141_761524                  I 17 C 0
s Semnopithecus_johnii.k141_785014                         117399  7 +    130994 tccc-a-a--------a
i Semnopithecus_johnii.k141_785014                      I 17 C 0
s Semnopithecus_priam.k141_410937                           36190  7 +     46263 tccc-a-a--------a
i Semnopithecus_priam.k141_410937                       I 17 C 0
s Semnopithecus_schistaceus.k141_387461                     29304  7 +     42640 tccc-a-a--------a
i Semnopithecus_schistaceus.k141_387461                 I 17 C 0
s Semnopithecus_vetulus.k141_1143185                        12353  7 +     30600 tccc-a-a--------a
i Semnopithecus_vetulus.k141_1143185                    I 17 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   98287  7 -    120886 tctc-a-g--------g
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2238559  7 +   2842873 TCCT-T-G--------A
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        13557  7 -  13920577 tccc-a-a--------a
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tarsius_lariang.k141_609102                               25131  7 +     42269 tccc-a-a--------a
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               58447  7 +     65473 tccc-a-a--------a
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194006409  3 - 194193292 TCC--------------
i Theropithecus_gelada.CM009951.1                       C 0 I 10
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             37930  7 -     47444 tccc-a-g--------a
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Trachypithecus_auratus.k141_738098                        25511  7 +     38948 tccc-a-a--------a
i Trachypithecus_auratus.k141_738098                    I 17 C 0
s Trachypithecus_crepusculus.k141_1588528                   19238  7 -     32910 TCCC-A-A--------A
i Trachypithecus_crepusculus.k141_1588528               I 17 C 0
s Trachypithecus_cristatus.k141_1011511                       625  7 -     12939 tccc-a-a--------a
i Trachypithecus_cristatus.k141_1011511                 I 17 C 0
s Trachypithecus_francoisi.k141_768164                        565  7 -     14244 tccc-a-a--------a
i Trachypithecus_francoisi.k141_768164                  I 17 C 0
s Trachypithecus_geei.k141_670367                           41958  7 -     54611 tccc-a-a--------a
i Trachypithecus_geei.k141_670367                       I 17 C 0
s Trachypithecus_germaini.k141_878600                         788  7 +      1165 tccc-a-a--------a
i Trachypithecus_germaini.k141_878600                   I 17 C 0
s Trachypithecus_hatinhensis.k141_504423                     1936  7 -     15592 tccc-a-a--------a
i Trachypithecus_hatinhensis.k141_504423                I 17 C 0
s Trachypithecus_laotum.k141_760702                           593  7 +     14371 tccc-a-a--------a
i Trachypithecus_laotum.k141_760702                     I 17 C 0
s Trachypithecus_leucocephalus.k141_283605                  50350  7 +     51589 tccc-a-a--------a
i Trachypithecus_leucocephalus.k141_283605              I 17 C 0
s Trachypithecus_melamera.k141_238507                       13526  7 +     14732 tccc-a-a--------a
i Trachypithecus_melamera.k141_238507                   I 17 C 0
s Trachypithecus_obscurus.k141_1115109                       4003  7 -     28054 tccc-a-a--------a
i Trachypithecus_obscurus.k141_1115109                  I 17 C 0
s Trachypithecus_phayrei.ctg3                            44658798  7 -  44834318 tccc-a-a--------a
i Trachypithecus_phayrei.ctg3                           I 17 C 0
s Trachypithecus_pileatus.k141_1022309                       1101  7 +     13828 tccc-a-a--------a
i Trachypithecus_pileatus.k141_1022309                  I 17 C 0
s Tupaia_chinensis.KB320831.1                             2791276  7 -   3938065 CCCC-C-a--------a
i Tupaia_chinensis.KB320831.1                           C 0 I 181
s Tupaia_tana.TupTan_flattened_line_68454                    3535  7 +     13056 cccc-c-a--------a
i Tupaia_tana.TupTan_flattened_line_68454               C 0 I 175
s Varecia_rubra.k141_432109                                  3890  7 -     20643 tccc-c-c--------a
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             23432  7 -     33872 tccc-c-c--------a
i Varecia_variegata.k141_775891                         C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       125659  7 -    134049 TCCC-T-G--------A
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     13876  7 -     20485 tccc-c-c--------a
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
e Eptesicus_fuscus.JH977687.1                             4702143 415 +   6522550 I
e Macroglossus_sobrinus.MacSob_scaffold_879                699974 431 +    802869 I
e Sorex_araneus.JH798170.1                               17748590 843 -  27805282 I
e Erinaceus_europaeus.JH835290.1                         11530833 462 +  16010500 I
e Chaetophractus_vellerosus.ChaVel_scaffold_1070855          1230  0 -      1715 I
e Suricata_suricatta.SurSur_flattened_line_20339            25319 430 +     62062 I
e Ziphius_cavirostris.ZipCav_flattened_line_127025           5301 442 -      8775 I
e Zalophus_californianus.ZalCal_flattened_line_4097        212018 448 -    227762 I
e Vulpes_lagopus.VulLag_flattened_line_2045                135489 449 -    281493 I
e Vicugna_pacos.KN269600.1                                1523037 433 -   2331223 I
e Ursus_maritimus.KK498671.1                              6512543 460 +  28682327 I
e Uropsilus_gracilis.UroGra_scaffold_4143_0                 24925  0 -     25548 I
e Tursiops_truncatus.MRVK01000923.1                      69311805 441 -  96451834 I
e Trichechus_manatus.JH594618.1                          16079679 1700 +  31416278 I
e Tragulus_javanicus.TraJav_scaffold_14717                   3584 419 +     90398 I
e Tonatia_saurophila.TonSau_scaffold_3334                  134241 421 -    259118 I
e Tolypeutes_matacus.TolMat_scaffold_269431                  1990 2406 +      6782 I
e Tapirus_terrestris.TapTer_scaffold_14939                  55756 434 +     99546 I
e Tapirus_indicus.TapInd_scaffold_176                      805095 435 +   1148477 I
e Tamandua_tetradactyla.TamTet_scaffold_26877               13106 433 +     45698 I
e Tadarida_brasiliensis.TadBra_scaffold_145589               4174 407 -      6213 I
e Sus_scrofa.CM000824.4                                 189270228 447 + 218635234 I
e Spilogale_gracilis.SpiGra_flattened_line_905             232751 445 -    276980 I
e Solenodon_paradoxus.SolPar_flattened_line_1012            16376 416 +    739146 I
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   29737 434 -    114521 I
e Saiga_tatarica.SaiTat_scaffold_82192                       5983 428 +     12214 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                17647 435 +    109198 I
e Rhinolophus_sinicus.LVEH01000179.1                      1786172 430 +   2252614 I
e Rangifer_tarandus.RanTarSib_scaffold_24239                14178 431 +     68503 I
e Puma_concolor.QAVW01000427.1                          131532079 431 - 161321710 I
e Pteropus_vampyrus.KN525959.1                             602305 437 -   3946241 I
e Pteropus_alecto.KB031157.1                             13244354 438 -  17261082 I
e Pteronura_brasiliensis.PteBra_flattened_line_1343        243991 454 -    344369 I
e Pteronotus_parnellii.KE867983.1                            2230 422 -     27784 I
e Procavia_capensis.ProCapCap_scaffold_15315                74302 1939 +     78963 I
e Platanista_gangetica.PlaMin_flattened_line_72990           3771 443 +     21690 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            95224 410 +    112873 I
e Phocoena_phocoena.PhoPho_flattened_line_11948            119703 443 -    122454 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113416 447 -    135482 I
e Pantholops_hodgsonii.KE114631.1                         1064538 417 -   1292953 I
e Panthera_tigris.KE721879.1                              5025497 431 -   6340057 I
e Panthera_pardus.KV860323.1                              3635849 432 +  18214204 I
e Panthera_onca.PanOnc_flattened_line_1615                  32116 431 +    295523 I
e Ovis_canadensis.OviCan_scaffold_6251                      76891 417 +    140051 I
e Ovis_aries.CM001582.2                                 134075677 417 - 275406953 I
e Otocyon_megalotis.JAEUCK010005121.1                      305421 444 -    505867 I
e Orycteropus_afer.OryAfe_flattened_line_13509              41471 1764 -     66828 I
e Orcinus_orca.KB316965.1                                 7223086 443 -   7562323 I
e Okapia_johnstoni.LVCL01S0017931.1                         35255 573 +     78940 I
e Odocoileus_virginianus.KZ101650.1                       1078100 432 +   1425656 I
e Odobenus_rosmarus.KB229369.1                             677288 443 -   3126709 I
e Nyctereutes_procyonoides.CAJHUB010000786.1                28082 449 +   3668941 I
e Noctilio_leporinus.NocLep_scaffold_12062                  47676 415 +     94413 I
e Neophocaena_asiaeorientalis.KZ688543.1                  3949402 443 -   4490290 I
e Neomonachus_schauinslandi.NINY01007774.1                4482632 454 -  14209539 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3432 432 -      8794 I
e Myotis_myotis.MyoMyo_scaffold_6123                         8554 416 +     66751 I
e Myotis_lucifugus.GL429887.1                             3463359 417 -   3747815 I
e Myotis_davidii.KB114863.1                               5017463 416 +   6462685 I
e Myotis_brandtii.KE161952.1                               965772 418 +   8389877 I
e Mustela_putorius.JH417978.1                             4421898 453 -  28371801 I
e Murina_feae.MurFea_scaffold_2254                          17451 414 -    100666 I
e Mungos_mungo.MunMun_flattened_line_8729                  142653 430 -    168139 I
e Moschus_moschiferus.MosMos_scaffold_146101                 2972 432 -      4346 I
e Mormoops_blainvillei.MorMeg_scaffold_2952                159560 424 +    265003 I
e Monodon_monoceros.MonMon_M_scaffold_5598                 144790 442 +    154973 I
e Mirounga_angustirostris.MirAng_flattened_line_8852         9033 661 -    104932 I
e Miniopterus_schreibersii.MinSch_scaffold_24116            32480 421 +     45743 I
e Miniopterus_natalensis.LDJU01000022.1                   8207809 420 +  10048721 I
e Micronycteris_hirsuta.MicHir_scaffold_37978               21050 428 -     32043 I
e Microgale_talazaci.MicTal_scaffold_34660                  29351 1133 -     48017 I
e Mellivora_capensis.MelCap_flattened_line_146202             327 452 -      1999 I
e Megaderma_lyra.MegLyr_scaffold_3562                       62628 576 -    234502 I
e Manis_pentadactyla.KN017078.1                             34538 441 +     58827 I
e Manis_javanica.JSZB01003966.1                            144466 438 +    252755 I
e Lycaon_pictus.CM007556.1                               11085089 449 +  39895028 I
e Loxodonta_africana.GL010040.1                          20589215 1702 -  62548349 I
e Lipotes_vexillifer.KE558548.1                            134353 444 +   3060487 I
e Leptonychotes_weddellii.KB714749.1                      3083728 458 -   3498232 I
e Lasiurus_borealis.LasBor_scaffold_5102                   111937 417 -    115756 I
e Kogia_breviceps.KogBre_flattened_line_35920               22021 443 +     37189 I
e Inia_geoffrensis.IniGeo_flattened_line_66725               7195 437 +     17520 I
e Hyaena_hyaena.HyaHya_flattened_line_20729                 14013 474 -     67322 I
e Hipposideros_galeritus.HipGal_scaffold_104691              5946 409 -      9143 I
e Hipposideros_armiger.JXIK01001085.1                      276788 408 -    477199 I
e Hippopotamus_amphibius.HipAmp_scaffold_1308              145449 430 +    277961 I
e Heterohyrax_brucei.HetBruBak_scaffold_25354               54438 1939 +     73687 I
e Hemitragus_hylocrius.HemHyl_scaffold_16669                25884 416 -     91191 I
e Helogale_parvula.HelPar_flattened_line_22962              14960 432 +     53719 I
e Giraffa_tippelskirchi.LVKQ01S012154.1                    179385 717 -    189561 I
e Felis_nigripes.FelNig_flattened_line_8080                 18925 427 +     52776 I
e Felis_catus_fca126.CM031420.1                         129277790 427 - 158578461 I
e Eubalaena_japonica.EubJap_flattened_line_7756             59838 466 +     89355 I
e Eschrichtius_robustus.EscRob_flattened_line_685          313408 442 +    330699 I
e Equus_przewalskii.ATBW01073585.1                          11036 704 +     92910 I
e Equus_caballus.CM000402.2                              13349546 704 +  41866177 I
e Equus_asinus.JREZ01000062.1                             5851044 703 -   7175178 I
e Enhydra_lutris.KZ291749.1                              85869516 453 +  99434291 I
e Elephantulus_edwardii.JH947210.1                        7804622 10712 +  15467074 I
e Elaphurus_davidianus.JRFZ01086400.1                     1489870 432 +   1727528 I
e Eidolon_helvum.KE772537.1                                 10556 435 +     24177 I
e Echinops_telfairi.JH980316.1                           22994071  0 -  44670279 C
e Diceros_bicornis.DicBicMic_scaffold_9545                    953 1024 +    151128 I
e Dicerorhinus_sumatrensis.PEKH010003161.1                 320309 1016 +    993696 I
e Desmodus_rotundus.KZ672188.1                           18697183 419 -  18957592 I
e Delphinapterus_leucas.KZ290064.1                       80035206 438 -  96802777 I
e Dasypus_novemcinctus.JH568778.1                          180040 2424 -   6883506 I
e Cryptoprocta_ferox.CryFer_flattened_line_19014            49751 433 -     70449 I
e Crocidura_indochinensis.CroInd_scaffold_38409             18067 408 -     19186 I
e Craseonycteris_thonglongyai.CraTho_scaffold_22679         37588 826 -     40477 I
e Condylura_cristata.JH655880.1                          60611131 297 +  78930452 I
e Choloepus_hoffmanni.KN194586.1                           760141 439 +    964067 I
e Choloepus_didactylus.ChoDid_scaffold_36182                14830 439 -     21363 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_160623         1406 1024 -      9338 I
e Catagonus_wagneri.CatWag_scaffold_1305                   157166 412 -    276539 I
e Carollia_perspicillata.CarPer_scaffold_4436               57873 420 +     67245 I
e Capra_hircus.CM004562.1                               135704839 417 - 157403528 I
e Capra_aegagrus.CM003214.1                              21323612 417 + 157394656 I
e Canis_lupus_orion.HG994411.1                           16452657 449 -  44759192 I
e Canis_lupus_familiaris.chr31                           11085633 449 +  39895921 I
e Canis_lupus_dingo.QKWQ01001993.1                       11263104 449 -  35597290 I
e Canis_lupus_VD.CanFam_VD_scaffold_16982                   11461 449 +     87036 I
e CanFam4.chr31                                          11516443 449 +  39901454 I
e Camelus_ferus.KB016973.1                                2971365 436 +   6889770 I
e Camelus_dromedarius.KN271192.1                           395631 437 -  15254737 I
e Camelus_bactrianus.KN276303.1                           3217927 436 -   8989139 I
e Bubalus_bubalis.KI419065.1                              1229342 431 -   1914593 I
e Bos_taurus.CM000177.6                                 136293586 432 - 158972876 I
e Bos_mutus.JH883513.1                                     570227 432 -    998990 I
e Bos_indicus.CM003021.1                                138137853 432 - 161108492 I
e Bison_bison.KN264915.1                                  6557614 432 +   6870073 I
e Beatragus_hunteri.BeaHun_scaffold_21644                   41603 412 -     72089 I
e Balaenoptera_bonaerensis.DF502048.1                        3753 444 -     13118 I
e Balaenoptera_acutorostrata.KI537095.1                  26378522 443 +  51448160 I
e Artibeus_jamaicensis.ArtJam_scaffold_41619                 7075 421 -     29036 I
e Antilocapra_americana.AntAmePen_scaffold_42841            29107 427 +     33004 I
e Anoura_caudifer.AnoCau_scaffold_422                      388679 416 -    631301 I
e Ammotragus_lervia.NIVO01013474.1                        3518508 445 +   4113121 I
e Ailurus_fulgens.LNAC01000003.1                          7091784 657 -  16596857 I
e Ailuropoda_melanoleuca.LNAT01000321.1                  10655057 459 +  23371972 I
e Acinonyx_jubatus.LLWD01000356.1                         2031739 430 +   3721120 I
e Hylobates_pileatus_a.tarseq_592                             30921 2351 -     60944 I
e Hylobates_pileatus_b.ContigUN                                 14622428 998 -  25970782 I
e Hylobates_muelleri.k141_1133650                            2317  0 -      2775 I
e Hylobates_klossii.k141_466549                              9327 960 +     11537 I
e Hylobates_agilis.k141_1485652                              1303  0 -      1697 I
e Hylobates_abbotti.k141_493872                              2882 965 +      5897 I
e Psammomys_obesus.NESX01026517.1                           32070  0 +     77221 C
e Meriones_unguiculatus.MerUng_scaffold_52233               10520  0 +     15977 C
e Acomys_cahirinus.AcoCah_scaffold_1625                    111065  0 -    189883 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               10551 50 +    209709 agtc-atttgctct--c-cct--taagt-ttcctaCATTCTTCC--------T----C----C-TGC-CTT---------CC-CT
s Allactaga_bullata.AllBul_scaffold_70162                   11566 39 -     22067 aatc-acctactgt--c-ccc--taact-tgcctaagtcctctg--------t----c---------------------------
i Allactaga_bullata.AllBul_scaffold_70162               C 0 I 22
s Allenopithecus_nigroviridis.k141_3103728                   1158 50 +      1665 agtc-atttgctcc--c-cac--tgAGT-TTCCTACATTCTCCC--------T----C----C-TGC-CTT---------CC-CT
i Allenopithecus_nigroviridis.k141_3103728              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                          640 44 -     29318 -------TTGCTCC--C-CAC--TGAGT-TTCCTACATTCTCCC--------T----C----C-TGC-TTT---------CC-CT
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_21781                            778 44 +      1343 -------TTGCTCC--C-CAC--TGAGT-TTCCTACATTCTCCC--------T----C----C-TGC-CTT---------CC-CT
i Allochrocebus_preussi.k141_21781                      I 159 I 61
s Allochrocebus_solatus.k141_371672                           534 44 -     80423 -------TTGCTCC--C-CAC--TGAGT-TTCCTACATTCTCCC--------T----C----C-TGC-TTT---------CC-CT
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             8817 50 -     18050 AGTC-ATTTGCTCT--C-CCC--TAAGT-TTCCTACTTTGTCCT--------T----C----C-TGC-CTT---------CC-CT
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  9930 50 -     11521 AGTC-ATTTGCTCT--C-CCC--TAAGT-TTCCTACTTTGTCCT--------T----C----C-TGC-CTT---------CC-CT
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              9494 50 -     21359 AGTC-ATTTGCTCT--C-CCC--TAAGT-TTCCTACTTTGTCCT--------T----C----C-TGC-CTT---------CC-CT
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_298055                                  785 50 +      1823 AGTC-ATTTGCTCT--C-CCC--TAAGT-TTCCTACATTGTCCT--------T----C----C-TGC-CTT---------CC-CT
i Alouatta_juara.k141_298055                            C 0 C 0
s Alouatta_macconnelli.k141_1331706                          8785 50 -     10438 AGTC-ATTTGCTCT--C-CCC--TAAGT-TTCCTACATTGTCCT--------T----C----C-TGC-CTT---------CC-CT
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            5441 50 +      7047 AGTC-ATTTGCTCT--C-CCC--TAAGT-TTCCTACATTGTCCT--------T----C----C-TGC-CTT---------CC-CT
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             8726 50 +     10410 AGTC-ATTTGCTCT--C-CCC--TAAGT-TTCCTACTTTGTCCT--------T----C----C-TGC-CTT---------CC-CT
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            2531 50 -      4927 AGTC-ATTTGCTCT--C-CCC--TAAGT-TTCCTACTTTGTCCT--------T----C----C-TGC-CTT---------CC-CT
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             5460 50 +      6429 AGTC-ATTTGCTCT--C-CCC--TAAGT-TTCCTACTTTGTCCT--------T----C----C-TGC-CTT---------CC-CT
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Aotus_azarae.k141_3170768                                 61183 50 +     78111 AGTC-ATTTGCTCT--C-CCC--TAAGT-TTCCTACTCTGTCCC--------T----C----C-TGC-CTT---------CC-CT
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            4124 50 +     22701 AGTC-ATTTGCTCT--C-CCC--TAAGT-TTCCTACTCTGTCCC--------T----C----C-TGC-CTT---------CC-CT
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5748081 50 +   9889416 AGTT-ATTTGCTCT--C-CCC--TAAGT-TTCCTACTTTgtccc--------t----c----c-tgc-ctt---------cc-ct
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             4666 50 -    104377 agtt-atttgcTCT--C-CCC--TAAGT-TTCCTACTTTGTCCC--------T----C----C-TGC-CTT---------CC-CT
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               4672 50 +     23246 agtt-atttgcGCT--C-CCC--TAAGT-TTCCTACTTTGTCCC--------T----C----C-TGC-CTT---------CC-CT
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     2496 33 +      5067 aatc-atttgctgt--c-ccc--taagt-gacctacattc---------------------------------------------
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 I 12
s Arctocebus_calabarensis.k141_1161114                      16472 50 +     17483 AATC-ATTTCCTCT--C-CCT--TACAC-TGCCTACGTCCTGTC--------T----C----C-TGT-CTT---------TT-CT
i Arctocebus_calabarensis.k141_1161114                  C 0 I 13
s Ateles_geoffroyi_b.tarseq_2582                             9537917 50 +  39197703 AGTC-ATTTGCTCT--C-CCC--AAAGT-TTCCTACATTGTCCT--------T----C----C-TGC-CTT---------CC-CT
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             59201 50 +     85812 AGTC-ATTTGCTCT--C-CCC--TAAGT-TTCCTACATTGTCCT--------T----C----C-TGC-CTT---------CC-CT
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                10200 50 +     89302 AGTC-ATTTGCTCT--C-CCC--TAAGT-TTCCTACATTGTCCT--------T----C----C-TGC-CTT---------CC-CT
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             14705 50 -     58268 AGTC-ATTTGCTCT--C-CCC--AAAGT-TTCCTACATTGTCCT--------T----C----C-TGC-CTT---------CC-CT
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             62696 50 +    119057 AGTC-ATTTGCTCT--C-CCC--TAAGT-TTCCTACATTGTCCT--------T----C----C-TGC-CTT---------CC-CT
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               4665 50 -     25888 AGTC-ATTTGCTCT--C-CCC--TAAGT-TTCCTACATTGTCCT--------T----C----C-TGC-CTT---------CC-CT
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 5305 40 -     16375 aatc-atttattct--c-ccc--taaat-tgcctacatcccccc--------t----c----t----------------------
i Avahi_laniger.k141_2840928                            C 0 I 20
s Avahi_peyrierasi.k141_2689020                              1624 40 +      2719 aatc-atttattct--c-ccc--taaat-tgcctacatcccccc--------t----c----t----------------------
i Avahi_peyrierasi.k141_2689020                         C 0 I 20
s Cacajao_ayresi.k141_724503                               112559 50 -    171031 AGTC-ATTTGCTCT--C-CCC--TACGT-TTCCTACGTTGCTCT--------T----C----C-TGC-CTT---------CC-CT
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 11585 50 +    125063 AGTC-ATTTGCTCT--C-CCC--TACGT-TTCCTACATTGCTCT--------T----C----C-TGC-CTT---------CC-CT
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                13633 50 -    216513 AGTC-ATTTGCTCT--C-CCC--TACGT-TTCCTACGTTGCTCT--------T----C----C-TGC-CTT---------CC-CT
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        6173 50 -    134917 AGTC-ATTTGCTCT--C-CCC--TACGT-TTCCTACATTGCTCT--------T----C----C-TGC-CTT---------CC-CT
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Capromys_pilorides.CapPil_scaffold_979108                   602 46 -      1248 GATA-ATTCATTGT--C-CCT--GA------CCTTCATCTTTTC--------T----C--ATT-T-T-TTT---------CT-GA
i Capromys_pilorides.CapPil_scaffold_979108             C 0 I 13
s Carlito_syrichta.NW_007248099.1                          307655 47 +    345090 CATC-ATTTATTCT--C-TCC--TAAAT-TGACTACAT---CTC--------T----C----C-TGT-CAC---------CC-CT
i Carlito_syrichta.NW_007248099.1                       C 0 I 7
s Castor_canadensis.CasCan_scaffold_47037                   29086 47 +     33760 aatc-atttactgt--a-tgc--tgagt-tgctgacatcca--c--------t----t----c-c-t-tgt---------cc-tg
i Castor_canadensis.CasCan_scaffold_47037               C 0 I 253
s Cavia_aperea.AVPZ01000278.1                            15785236 59 -  24422027 -ATA-ATGGATTGA--T-GCT--CACAT-TGCcttcatcctttt--------t----cttttt-t-t-ttttttttt-c-cc-ta
i Cavia_aperea.AVPZ01000278.1                           C 0 I 13
s Cavia_porcellus.DS562889.1                             15797170 59 -  24440124 -ata-atggattga--t-gct--cacat-tgccttcatcctttt--------t----ctttct-t-t-tttttttt--cccc-ta
i Cavia_porcellus.DS562889.1                            C 0 I 13
s Cavia_tschudii.CavTsc_scaffold_488                       175361 59 +    436027 -ata-atggattga--t-gct--cacat-tgccttcatcctttt--------t----ctttct-t-t-tttttttt--cccc-ta
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 I 13
s Cebus_albifrons.Contig22                               18889415 50 -  29618158 agtc-atttgctct--c-ccc--taagt-ttcctacattgtccc--------t----c----c-tgc-ctt---------cc-ct
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 6959 50 -     26817 AGTC-ATTTGCTCT--C-CCC--TAAGT-TTCCTACATTGTCCC--------T----C----C-TGC-CTT---------CC-CT
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                11199 50 +     25043 AGTC-ATTTGCTCT--C-CCC--TAAGT-TTCCTACATTGTCCC--------T----C----C-TGC-CTT---------CC-CT
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         6688 47 +     21754 catc-atttattct--c-tcc--taaat-tgcctacat---ctc--------t----c----c-tgt-cat---------cc-ct
i Cephalopachus_bancanus.k141_702587                    C 0 I 7
s Cercocebus_atys.KQ010443.1                              6553856 44 +   6739814 -------TTGCTCC--C-CAC--TGAGT-TTCCTACATTCTCCC--------T----C----C-TGC-TTT---------CC-CT
i Cercocebus_atys.KQ010443.1                            I 10 C 0
s Cercocebus_chrysogaster.k141_2328246                      25333 44 +     60454 -------TTGCTCC--C-CAC--TGAGT-TTCCTACATTCTCCC--------T----C----C-TGC-TTT---------CC-CT
i Cercocebus_chrysogaster.k141_2328246                  I 10 C 0
s Cercocebus_lunulatus.k141_4634644                           538 44 -     21101 -------TTGCTCC--C-CAC--TGAGT-TTCCTACATTCTCCC--------T----C----C-TGC-TTT---------CC-CT
i Cercocebus_lunulatus.k141_4634644                     I 10 C 0
s Cercocebus_torquatus.k141_3969582                         57848 44 -    107033 -------TTGCTCC--C-CAC--TGAGT-TTCCTACATTCTCCC--------T----C----C-TGC-TTT---------CC-CT
i Cercocebus_torquatus.k141_3969582                     I 10 C 0
s Cercopithecus_ascanius.k141_4123525                         743 50 -     17608 AGTC-ATTTGCTCC--C-CAC--TGAGT-TTCCTACACTCTCCC--------T----C----C-TGC-CTT---------CC-CT
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          28241 50 +     30494 AGTC-ATTTGCTCC--C-CAC--TGAGT-TTCCTACACTCTCCC--------T----C----C-TGC-CTT---------CC-CT
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          57084 50 -     59240 AGTC-ATTTGCTCC--C-CAC--TGAGT-TTCCTACATTCTCCC--------T----C----C-TGC-TTT---------CC-CT
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                           785 50 +     16677 AGTC-ATTTGCTCC--T-CAC--TGAGT-TTCCTACACTCTCCC--------T----C----C-TGC-CTT---------CC-CT
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           22943 50 +     35983 AGTC-ATTTGCTCC--C-CAC--TGAGT-TTCCTACACTCTCCC--------T----C----C-TGC-CTT---------CC-CT
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11989474 50 +  12117833 AGTC-ATTTGCTCC--C-CAC--TGAGT-TTCCTACACTCTCCC--------T----C----C-TGC-CTT---------CC-CT
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46476229 50 +  46592721 AGTC-ATTTGCTCC--C-CAC--TGAGT-TTCCTACACTCTCCC--------T----C----C-TGC-CTT---------CC-CT
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      39780 50 -     45581 AGTC-ATTTGCTCC--C-CAC--TGAGT-TTCCTACATTCTCCC--------T----C----C-TGC-CTT---------CC-CT
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                        789 50 +     35577 AGTC-ATTTGCTCC--C-CAC--TGAGT-TTCCTACACTCTCCC--------T----C----C-TGC-CTT---------CC-CT
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                         562 50 -     25661 AGTC-ATTTGCTCC--C-CAC--TGAGT-TTCCTACACTCTCCC--------T----C----C-TGC-CTT---------CC-CT
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                         540 50 -     17744 AGTC-ATTTGCTCC--C-CAC--TGAGT-TTCCTACACTCTCCC--------T----C----C-TGC-CTT---------CC-CT
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        20149 50 +     37128 AGTC-ATTTGCTCC--C-CAC--TGAGT-TTCCTACATTCTCCC--------T----C----C-TGC-TTT---------CC-CT
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           57608 49 -     68416 aatc-atttatgct--t-ccc--taagt-tgcctacata-tccc--------t----c----c-tgt-ctt---------tc-ct
i Cheirogaleus_major.k141_1157592                       C 0 I 13
s Cheirogaleus_medius.k141_133808                            6651 49 +     13308 aatc-atttatgct--t-ccc--taagt-tgcctacata-tccc--------t----c----c-tgt-ctt---------tc-ct
i Cheirogaleus_medius.k141_133808                       C 0 I 13
s Cheracebus_lucifer.k141_619653                             4209 50 -     18223 AGTC-ATTTGCTCT--C-CCC--TAAGT-TTCCTACATTGTCCT--------T----C----C-TGC-CTT---------CC-CT
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             21232 50 +     25473 AGTC-ATTTGCTCT--C-CCC--TAAGT-TTCCTACATTGTCCT--------T----C----C-TGC-CTT---------CC-CT
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           40267 50 +     57117 AGTC-ATTTGCTCT--C-CCC--TAAGT-TTCCTACATTGTCCT--------T----T----C-TGC-CTT---------CC-CT
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          44946 50 +     54541 AGTC-ATTTGCTCT--C-CCC--TAAGT-TTCCTACATTGTCCT--------T----T----C-TGC-CTT---------CC-CT
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15960390 49 +  43084221 gcta-atttcttgt--c-ctt--tacat-tgccttcatcctttc--------t----c----t-t-t-ttt---------ct-ca
i Chinchilla_lanigera.JH721867.1                        C 0 I 13
s Chiropotes_israelita.k141_1189915                         69768 50 +    196370 AGTC-ATTTGCTCT--C-CCT--TATGT-TTCCTACATTGTTCT--------T----C----C-TGC-CTT---------CC-CT
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          13948 50 +     40510 AGTC-ATTTGCTCT--C-CCT--TATGT-TTCCTACATTGTTCT--------T----C----C-TGC-CTT---------CC-CT
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15137700 44 -  15256731 -------TTGCTCC--C-CAC--TGAGT-TTCCTACATTCTCCC--------T----C----C-TGC-TTT---------TC-CT
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      32747 44 -     53260 -------TTGCTCC--C-CAC--TGAGT-TTCCTACATTCTCCC--------T----C----C-TGC-TTT---------TC-CT
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101143310 44 + 101219884 -------TTGCTCC--C-CAC--TGAGT-TTCCTACATTCTCCC--------T----C----C-TGC-TTT---------TC-CT
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10885069 50 +  10971483 AGTC-ATTTGCTCC--C-CAC--TAAGT-TTCCTAcattctccc--------t----c----c-tgc-ctt---------cc-ct
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147663233 50 + 156195979 agtc-atttgctcc--c-cac--taagt-ttcctacattctccc--------t----c----c-tgc-ctt---------cc-ct
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            15217 50 +     23629 agtc-atttgctcc--c-cac--taagt-ttcctacattctccc--------t----c----c-tgc-ctt---------cc-ct
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 276979 39 -    399297 aatt-atttaccat--t-tcc--taaat-tgcctacagcccctg--------c----c---------------------------
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 I 21
s Cricetulus_griseus.LT883672.1                          53027633 39 +  72327488 CATT-ATTTACTGC--C-CCG--TAAAT-TGCCTGCGTCTTCTA--------C----C---------------------------
i Cricetulus_griseus.LT883672.1                         C 0 I 22
s Ctenodactylus_gundi.CteGun_scaffold_447                  206807 50 -    956709 tagc-attcagtgt--caccc--tacct-tcccatcatcccttt--------c----c----t-a-t-ttt---------ct-ca
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 I 13
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 29363 54 -     67205 gata-attcattgt--c-tct--ga------ccttcaaattttcccctcttgt----tat--t-t-t-ttt---------ct-ga
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 I 13
s Cuniculus_paca.CunPac_flattened_line_16637                16395 54 +     26546 gaca-atttattgc--c-cct--tacat-tgccttcatcctttc--------tctctct---t-t-t-ttt---------cc-ca
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 I 13
s Dasyprocta_punctata.DasPun_flattened_line_634             57495 38 -    236241 gata-atttattgt--c-cct--tacat-tgccttcatgctttc--------t--------------------------------
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 I 23
s Daubentonia_madagascariensis.ctg11                     16843466 39 +  31942871 aatc-attcactct--c-ccc--taagt-tgcctatatcccctc--------t----c---------------------------
i Daubentonia_madagascariensis.ctg11                    C 0 I 24
s Dinomys_branickii.DinBra_scaffold_1996                   156280 39 +    228994 gata-gtttcttct--c-ctt--tacat-cgctttcatcctttc--------t----t---------------------------
i Dinomys_branickii.DinBra_scaffold_1996                C 0 I 18
s Dipodomys_ordii.KN672545.1                              3654618 47 +   4240102 AGT--ATTTTCTGT--C-CCC--TA-AT-TGCTTaaaactgttt--------t----c----t-t-c-ttt---------ct-gt
i Dipodomys_ordii.KN672545.1                            C 0 I 234
s Dipodomys_stephensi.DipSte_scaffold_44365                 26256 47 +     28912 AGT--ATTTTCTGT--C-CCC--TA-AT-TGCTTACAACTGTTT--------T----C----T-T-C-TTT---------CT-GT
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 I 232
s Dolichotis_patagonum.DolPat_scaffold_14102                34739 38 -     73477 -ata-atttattgt--c-cct--tacat-tgccttcatctgttc--------t----c---------------------------
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 I 24
s Ellobius_lutescens.LOEQ01003611.1                        238299 25 -    369425 ------------------CCC--TCAGT-TACCTACATCCTCTG--------C----C---------------------------
i Ellobius_lutescens.LOEQ01003611.1                     I 13 I 20
s Ellobius_talpinus.LOJH01090055.1                           5315 25 -      7838 ------------------CCC--TCAGT-TACCTACATCCTCTG--------C----C---------------------------
i Ellobius_talpinus.LOJH01090055.1                      I 13 I 22
s Erythrocebus_patas.Contig8                             48769880 44 -  48907691 -------TTGCTCC--C-CAC--TGAGT-TTCCTACATTCTCCC--------T----C----C-TGC-TTT---------CC-CT
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eulemur_albifrons.k141_715837                              3651 50 +     13586 aatc-atttatttt--c-ctc--taaat-tgcctacatctccct--------t----c----c-tgt-ctt---------tc-ct
i Eulemur_albifrons.k141_715837                         C 0 I 13
s Eulemur_collaris.k141_311830                               3586 50 -      6809 aatc-atttatttt--c-ctc--taaat-tgcctacatctccct--------t----c----c-tgt-ctt---------tc-ct
i Eulemur_collaris.k141_311830                          C 0 I 12
s Eulemur_coronatus.k141_3240342                            10061 50 +     36558 aatc-atttattct--c-ccc--taagt-tgcctgcatctccct--------t----c----c-tgt-ctt---------tc-ct
i Eulemur_coronatus.k141_3240342                        C 0 I 13
s Eulemur_flavifrons.k141_903901                             6377 50 +     60246 aatc-atttattct--c-ccc--taagt-tgtctacatctccct--------t----c----c-tgt-ctt---------tc-ct
i Eulemur_flavifrons.k141_903901                        C 0 I 13
s Eulemur_fulvus.k141_653297                                 9859 50 +    109717 aatc-atttattct--c-ctc--taagt-tgcctacatctccct--------t----c----t-tgt-ctt---------tc-ct
i Eulemur_fulvus.k141_653297                            C 0 I 13
s Eulemur_macaco.k141_1341545                               14239 50 +     16540 aatc-atttattct--c-ccc--taagt-tgtctacatctccct--------t----c----c-tgt-ctt---------tc-ct
i Eulemur_macaco.k141_1341545                           C 0 I 13
s Eulemur_mongoz.k141_825972                                14511 50 +     27497 aatc-atttattct--c-ctc--taagt-tgcctacatctccct--------t----c----c-tgt-ctt---------tc-ct
i Eulemur_mongoz.k141_825972                            C 0 I 13
s Eulemur_rubriventer.k141_411740                           16971 50 +     26808 aatc-atttattct--c-ccc--taagt-tgcctgcatctccct--------t----c----c-tgt-ctt---------tc-ct
i Eulemur_rubriventer.k141_411740                       C 0 I 13
s Eulemur_rufus.k141_1620292                                31704 50 +     46535 aatc-atttatttt--c-ctc--taaat-tgcctacatctccct--------t----c----c-tgt-ctt---------tc-ct
i Eulemur_rufus.k141_1620292                            C 0 I 12
s Eulemur_sanfordi.k141_186399                              14427 50 -     29447 aatc-atttatttt--c-ctc--taaat-tgcctacatctccct--------t----c----c-tgt-ctt---------tc-ct
i Eulemur_sanfordi.k141_186399                          C 0 I 12
s Fukomys_damarensis.KN123630.1                          13891345 50 -  19261668 GATA-ATTTAttgt--c-act--tacat-tcccttcattctttc--------t----c---cc-t-t-ttt---------cc-ca
i Fukomys_damarensis.KN123630.1                         C 0 I 8
s Galago_moholi.ctg555                                     209558 50 -    847004 aatc-atttactct--c-cct--taagt-tgcctacatcctgtc--------t----c----c-tgt-ctt---------tt-cc
i Galago_moholi.ctg555                                  C 0 I 13
s Galago_senegalensis.k141_964197                           11937 50 -     43889 aatc-atttactct--c-cct--taagt-tgcctacatcctgtc--------t----c----c-tgt-ctt---------tt-cc
i Galago_senegalensis.k141_964197                       C 0 I 13
s Galagoides_demidoff.k141_1769638                           9010 49 +     27357 aatc-atttaccct--c-cct--taagt-tgcctacatcct-tc--------t----c----c-tgt-ctt---------tt-ct
i Galagoides_demidoff.k141_1769638                      C 0 I 10
s Galeopterus_variegatus.GalVar_scaffold_354               154909 48 +    324696 aata-atttaatct--c-tcc--taaat-tgtcaacattctccc--------t----c----c-t---ctc---------cc-cc
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 I 13
s Glis_glis.GliGli_scaffold_79770                           11290 49 -     18683 aatc-acctactgt--c-ctc--taagt-tgcccatatcctctc--------t----c----c-c-c-ttt---------cc-ct
i Glis_glis.GliGli_scaffold_79770                       C 0 I 13
s Gorilla_beringei.k141_111300                               3951 50 -     14630 agtc-atttgctct--c-ccc--taagt-tttctacattctccc--------t----c----c-tgc-ctt---------cc-ct
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119651050 50 - 195582420 agtc-atttgctct--c-ccc--taagt-tttctacattctccc--------t----c----c-tgc-ctt---------cc-ct
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   76035 51 +    118900 aatc-acctgctgt--c-ctctctcagt-tgcccatattctctc--------t----c----c-c-c-ttt---------cc-cc
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 I 13
s Hapalemur_alaotrensis.k141_1280836                          475 49 +     10286 aatc-atttattct--c-ccc--taact-tgcctacatcttccc--------t----c----c-tg--ctt---------tc-ct
i Hapalemur_alaotrensis.k141_1280836                    C 0 I 13
s Hapalemur_gilberti.k141_1254239                            8625 49 +      9690 aatc-atttattct--c-ccc--taact-tgcctacatcttcct--------t----c----c-tg--ctt---------tc-ct
i Hapalemur_gilberti.k141_1254239                       C 0 I 13
s Hapalemur_griseus.k141_1387522                             4254 49 +     56096 aatc-atttattct--c-ccc--taact-tgcctacatcttcct--------t----c----c-tg--ctt---------tc-ct
i Hapalemur_griseus.k141_1387522                        C 0 I 13
s Hapalemur_meridionalis.k141_186231                        27530 49 -     42470 aatc-atttattct--c-ccc--taact-tgcctacatcttccc--------t----c----c-tg--ctt---------tc-ct
i Hapalemur_meridionalis.k141_186231                    C 0 I 13
s Hapalemur_occidentalis.k141_797938                        44128 49 -     54384 aatc-atttattct--c-ccc--taact-tgcctacatcttccc--------t----c----c-tg--ctt---------tc-ct
i Hapalemur_occidentalis.k141_797938                    C 0 I 13
s Heterocephalus_glaber.JH602058.1                        2549737 50 +  31725842 gata-atttgttgt--c-cct--ttcat-tgccttcatcctttc--------t----c---cc-g-t-ttt---------cc-ca
i Heterocephalus_glaber.JH602058.1                      C 0 I 11
s Hoolock_leuconedys.ctg2405                                   13982 50 -     15084 agtc-atttcccct--c-ccc--taagt-ttcctacattctccc--------t----c----c-tgc-ctt---------cc-ct
i Hoolock_leuconedys.ctg2405                               I 7 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           17640 50 -    119109 -ata-gt-tattgt--c-cct--tacat-cgcc-tcatcctttc--------t----cttttt-t-t-ttt---------cc-ca
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 I 13
s Hystrix_cristata.HysCri_scaffold_50788                     4790 49 +     22540 gata-atttattgt--c-cc---tacat-tgtcttcacccgttc--------t----c----cat-t-ttt---------cc-ca
i Hystrix_cristata.HysCri_scaffold_50788                C 0 I 13
s Ictidomys_tridecemlineatus.JH393315.1                   7124650 49 +  13083262 AATC-ATTTGCTGT--T-CCT--TAAAT-GGTGTAAATCCTCTC--------T----C----C-A-T-TTT---------CC-CT
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 I 13
s Indri_indri.k141_1884019                                   1900 50 -      2196 aatc-atttattct--c-ccc--taagt-tgcctacatccccct--------t----c----a-tgt-ctt---------tc-ct
i Indri_indri.k141_1884019                              C 0 N 0
s Jaculus_jaculus.JH725517.1                              8564310 39 +  11848649 AATC-ACCTACGGT--C-CCC--TAACT-AGCCTGAGTCCTCTG--------T----C---------------------------
i Jaculus_jaculus.JH725517.1                            C 0 I 22
s Lagothrix_lagothricha.k141_12968                          48786 50 -    147782 AGTC-ATTTGCTCT--C-CCC--TAAGT-TTCCTACGTTGTCCT--------T----C----C-TGC-CTT---------CC-CT
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lemur_catta.scaffold_1                                258405810 49 - 285822530 aatc-atttattct--c-ccc--taact-tgcctacatctcccc--------t----c----c-tg--ctt---------tc-ct
i Lemur_catta.scaffold_1                                C 0 I 13
s Lepilemur_ankaranensis.k141_884009                        22581 49 +     39228 catc-atttattct--c-cgc--taaat-tgcctacata-tccc--------t----c----c-tgt-ctt---------tc-ct
i Lepilemur_ankaranensis.k141_884009                    C 0 I 13
s Lepilemur_dorsalis.k141_134267                            51956 49 +     63517 catc-atttattct--c-ccc--taaat-tgcctacata-tccc--------t----c----c-tgt-ctt---------tc-ct
i Lepilemur_dorsalis.k141_134267                        C 0 I 13
s Lepilemur_ruficaudatus.k141_617879                        77199 49 +    116806 catc-atttattct--a-ccc--taaat-tgcctacata-tccc--------t----c----c-tgt-ctt---------tc-ct
i Lepilemur_ruficaudatus.k141_617879                    C 0 I 13
s Lepilemur_septentrionalis.k141_578524                     30220 49 -     33031 catc-atttattct--c-cgc--taaat-cgcctacata-tccc--------t----c----c-tgt-ctt---------tc-ct
i Lepilemur_septentrionalis.k141_578524                 C 0 I 13
s Lepus_americanus.LepAme_scaffold_62849                    11640 27 +     22452 ------------------tcc--caa----------gtgcttcc--------t----a----ctc-t-ctt---------cc-cc
i Lepus_americanus.LepAme_scaffold_62849                I 5 I 13
s Lophocebus_aterrimus.ctg55                             19246945 44 +  19376315 -------TTGCTCC--C-CAC--TGAGT-TTCCTACATTCTCCC--------T----C----C-TGC-TTT---------CC-CT
i Lophocebus_aterrimus.ctg55                            I 10 C 0
s Loris_lydekkerianus.k141_550999                            9322 50 +     84689 aatc-atttactct--t-cct--taagt-tgcctccatcctgtc--------t----c----c-tgt-ctt---------tt-ct
i Loris_lydekkerianus.k141_550999                       C 0 I 13
s Loris_tardigradus.ctg97                                 3777071 50 +   6799190 aatc-atttactct--t-cct--taagt-tgcctccatcctgtc--------t----c----c-tgt-ctt---------tt-ct
i Loris_tardigradus.ctg97                               C 0 I 13
s Macaca_arctoides.k141_2201161                             18624 44 +     74745 -------TTCCTCC--C-CAC--TGAGT-GTCCTACATTCTCCC--------T----C----C-TGC-CTT---------CC-CT
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12705141 44 +  12821369 -------TTCCTCC--C-CAC--TGAGT-GTCCTACATTCTCCT--------T----C----C-TGC-CTT---------CC-CT
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                 786 44 -      3136 -------TTCCTCC--C-CAC--TGAGT-GTCCTACATTCTCCC--------T----C----C-TGC-CTT---------CC-CT
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           45537 44 +     63263 -------TTCCTCC--C-CAC--TGAGT-GTCCTACATTCTCCC--------T----C----C-TGC-CTT---------CC-CT
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                  303 44 -      2568 -------TTCCTCC--C-CAC--TGAGT-GTCCTACATTCTCCC--------T----C----C-TGC-CTT---------CC-CT
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                  811 44 -      7381 -------TTCCTCC--C-CAC--TGAGT-GTCCTACATTCTCCC--------T----C----C-TGC-CTT---------CC-CT
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  44048 44 -     79256 -------TTCCTCC--C-CAC--TGAGT-GTCCTACATTCTCCC--------T----C----C-TGC-CTT---------CC-CT
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196034218 44 + 196197964 -------ttcctcc--c-cac--tgAGT-GTCCTACattctccc--------t----c----c-tgc-ctt---------cc-ct
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11444323 44 +  11645122 -------ttcctcc--c-cac--tgAGT-GTCCTACattctccc--------t----c----c-tgc-ctt---------cc-ct
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   2995 44 -     46448 -------TTCCTCC--C-CAC--TGAGT-GTCCTACATTCTCCC--------T----C----C-TGC-CTT---------CC-CT
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                 667 44 -     13212 -------TTCCTCC--C-CAC--TGAGT-GTCCGACATTCTCCC--------T----C----C-TGC-CTT---------CC-CT
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 14409 44 -     55006 -------TTCCTCC--C-CAC--TGAGT-GTCCTACATTCTCCC--------T----C----C-TGC-CTT---------CC-CT
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43839446 44 +  43892939 -------TTCCTCC--C-CAC--TGAGT-GTCCTACATTCTCCC--------T----C----C-TGC-CTT---------CC-CT
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               15696 44 -     24607 -------TTCCTCC--C-CAC--TGAGT-GTCCTACATTCTCCT--------T----C----C-TGC-CTT---------CC-CT
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               3000 44 -     27140 -------TTCCTCC--C-CAC--TGAGT-GTCCTACATTCTCCC--------T----C----C-TGC-CTT---------CC-CT
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43436104 44 -  43563597 -------TTGCTCC--C-CAC--TGAGT-TTCCTACATTCTCCC--------T----C----C-TGC-TTT---------CC-CT
i Mandrillus_leucophaeus.scaffold125                    I 10 C 0
s Mandrillus_sphinx.Contig144                             4448930 44 -   4543643 -------ttgctcc--c-cac--tgagt-ttcctacattctccc--------t----c----c-tgc-ttt---------cc-ct
i Mandrillus_sphinx.Contig144                           I 10 C 0
s Marmota_marmota.CZRN01000005.1                         36872485 49 +  64221397 AATC-ATTTGCTGT--T-CCT--TAAAT-GGCGTAAATCCTCTC--------T----C----C-A-T-TTC---------CA-CT
i Marmota_marmota.CZRN01000005.1                        C 0 I 13
s Mesocricetus_auratus.KB708139.1                         1045371 39 -  26018355 AATT-ATTTACTGC--C-CCA--TAAGT-TGCCTGCATCCTCTG--------C----C---------------------------
i Mesocricetus_auratus.KB708139.1                       C 0 I 22
s Microcebus_murinus.CM007691.1                          16508824 49 +  47401472 aatc-atttatttt--t-ccc--taagt-TGCCTAGATA-TCCC--------T----C----C-TGT-CTT---------TC-CT
i Microcebus_murinus.CM007691.1                         C 0 I 13
s Microtus_ochrogaster.CM001673.1                        22818505 25 -  98408828 ------------------CCC--TCAGT-TACCTACAACCTCTG--------C----C---------------------------
i Microtus_ochrogaster.CM001673.1                       I 13 I 22
s Miopithecus_ogouensis.k141_2935907                          651 50 +     29742 AGTC-ATTTGCTCC--C-CAC--TGAGT-TTCCTACCTTCTCCC--------T----C----C-TGC-CTT---------CC-CT
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirza_zaza.k141_226143                                     4223 49 +      8497 aatc-atttattct--t-ccc--taagt-tgcctacata-tccc--------t----c----c-tgt-ctt---------tg-ct
i Mirza_zaza.k141_226143                                C 0 I 13
s Mus_caroli.LT608236.1                                  70764991 13 +  92629107 ---------------------------------tacATCCCCTG--------C----C---------------------------
i Mus_caroli.LT608236.1                                 C 0 I 30
s Mus_musculus.chr16                                     75488028 13 +  98207768 ---------------------------------TACATACCCTG--------C----C---------------------------
i Mus_musculus.chr16                                    C 0 I 30
s Mus_pahari.LT608305.1                                  67554269 13 +  89017189 ---------------------------------tacATCCCCTG--------C----C---------------------------
i Mus_pahari.LT608305.1                                 C 0 I 30
s Mus_spretus.CM004110.1                                 74329207 13 +  97876770 ---------------------------------TACATACCCTG--------C----C---------------------------
i Mus_spretus.CM004110.1                                C 0 I 30
s Muscardinus_avellanarius.MusAve_scaffold_9643              9776 49 +     98495 aatc-acccattgt--c-ctt--taatt-ttccaatatcatttc--------t----c----t-c-c-ttt---------cc-ct
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 I 5
s Myocastor_coypus.MyoCoy_scaffold_3653                     88667 45 -    117718 gata-attcattgt--c-cc---ga------ccttcatcttttc--------t----tat--t-t-t-ttt---------ct-ga
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 I 13
s Nannospalax_galili.KL201303.1                            116796 39 +    362372 AAGT-ATTTACTAT--C-CCC--TAAGT-TGCCTGCATCCTCTG--------T----C---------------------------
i Nannospalax_galili.KL201303.1                         C 0 I 22
s Nasalis_larvatus.k141_153429                               7152 50 +     48152 AGTC-ATTTGCTCC--C-CAC--TAAGT-TTCCTACATTCTCCC--------T----C----C-TGC-CTT---------CC-CT
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Nomascus_annamensis.k141_1439838                           1509 50 +      3718 AGTC-ATTTCCCCT--C-CCC--TAAGT-TTCCTACATTCTCCC--------T----C----C-TGC-CTT---------CC-CT
i Nomascus_annamensis.k141_1439838                      I 7 I 116
s Nomascus_concolor.k141_49591                               1732 50 +      2014 agaa-atttcccct--c-ccc--taagt-ttcctacattctccc--------t----c----c-tgc-ctt---------cc-ct
i Nomascus_concolor.k141_49591                          C 0 C 0
s Nomascus_gabriellae.k141_642452                             657 50 +      2851 AGTC-ATTTCCCCT--C-CCC--TAAGT-TTCCTACATTCTCCC--------T----C----C-TGC-CTT---------CC-CT
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             23572 50 -  18771707 AGTC-ATTTcccct--c-ccc--taagt-ttcctacattctccc--------t----c----c-tgc-ctt---------cc-ct
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  1285 50 +      4512 agaa-atttcccct--c-ccc--taagt-ttcctacattctccc--------t----c----c-tgc-ctt---------cc-ct
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nycticebus_bengalensis.LG16                            65565764 49 -  95554990 AATC-ATTTACTC---T-CCT--TAAGT-TGCCTCCATCCTATC--------T----C----C-TGT-CTT---------TT-CT
i Nycticebus_bengalensis.LG16                           C 0 I 13
s Nycticebus_coucang.k141_2051882                            2493 49 +      6470 aatc-atttactc---t-cct--taagt-tgcctccatcctatc--------t----c----c-tgt-ctt---------tt-ct
i Nycticebus_coucang.k141_2051882                       C 0 I 13
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65668101 50 +  89412551 aatc-atttactct--c-cct--taagt-tgcctccatcctatc--------t----c----c-tgt-ctt---------tt-ct
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 I 13
s Ochotona_princeps.JH802095.1                            4994640 50 -  23139505 AATC-AAACTCTCC--C-TCC--CAACT-GGCCTATGTGATTTA--------T----C----CTC-T-CTG---------CT-CC
i Ochotona_princeps.JH802095.1                          C 0 I 13
s Octodon_degus.JH651621.1                                3684203 46 +  10294119 GATA-GTTCATTGC--C-CCT--GA------CCttcatcttttc--------t----tgt--t-t-t-ctt---------ct-ga
i Octodon_degus.JH651621.1                              C 0 I 13
s Ondatra_zibethicus.OndZib_scaffold_6821                  123757 13 +    145789 AATC-ATTTACCGC-----------------------------------------------------------------------
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 I 30
s Onychomys_torridus.OnyTor_scaffold_12578                  35510 39 +     62360 aatt-ctttactca--c-cct--tgagt-tacatatattctctg--------c----c---------------------------
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 I 22
s Oryctolagus_cuniculus.CM000803.1                      141874284 41 + 163896628 AATC-ATTTACTCC--C-TCC--CAA----------GTGCTTCC--------T----G----CTC-T-CTT---------TC-CC
i Oryctolagus_cuniculus.CM000803.1                      C 0 I 13
s Otolemur_crassicaudatus.k141_321880                       37652 52 +     38679 aatc-atttactctccc-cct--tccgt-tgcctacatcctgtc--------t----c----c-tgt-ctt---------tt-ct
i Otolemur_crassicaudatus.k141_321880                   C 0 I 13
s Otolemur_garnettii.GL873528.1                          18007080 52 -  38779656 AATC-ATTTACTCTCCC-CCT--TCCGT-TGCCTACATCCTGTC--------T----C----C-TGT-CTT---------TT-CT
i Otolemur_garnettii.GL873528.1                         C 0 I 13
s Pan_paniscus.CM003386.1                               127573294 50 - 205426864 AGTC-ATTTGCTCT--C-CCC--TAAGT-TTTCTACattctccc--------t----c----c-tgc-ctt---------cc-ct
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120150447 50 - 196562556 aGTC-ATTTGCTCT--C-CCC--TAAGT-TTTCTACattctccc--------t----c----c-tgc-ctt---------cc-ct
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Papio_anubis.CM001492.2                               188154894 44 - 188283584 -------TTGCTCC--C-CAC--TGAGT-TTCCTACATTCTCCC--------T----C----C-TGC-TTT---------CC-CT
i Papio_anubis.CM001492.2                               I 10 C 0
s Papio_cynocephalus.k141_883042                             3212 44 +      5367 -------TTGCTCC--C-CAC--TGAGT-TTCCTACATTCTCCC--------T----C----C-TGC-TTT---------CC-CT
i Papio_cynocephalus.k141_883042                        I 10 C 0
s Papio_hamadryas.Contig15                               47512283 44 +  47705337 -------TTGCTCC--C-CAC--TGAGT-TTCCTACATTCTCCC--------T----C----C-TGC-TTT---------CC-CT
i Papio_hamadryas.Contig15                              I 10 C 0
s Papio_kindae.k141_5458022                                 66261 44 -    104429 -------TTGCTCC--C-CAC--TGAGT-TTCCTACATTCTCCC--------T----C----C-TGC-TTT---------CC-CT
i Papio_kindae.k141_5458022                             I 10 C 0
s Papio_papio.k141_979496                                    4793 44 +     14967 -------TTGCTCC--C-CAC--TGAGT-TTCCTACATTCTCCC--------T----C----C-TGC-TTT---------CC-CT
i Papio_papio.k141_979496                               I 10 C 0
s Papio_ursinus.k141_1345919                                  654 44 -      7628 -------TTGCTCC--C-CAC--TGAGT-TTCCTACATTCTCCC--------T----C----C-TGC-TTT---------CC-CT
i Papio_ursinus.k141_1345919                            I 10 C 0
s Perodicticus_ibeanus.k141_117958                           3699 50 -     23713 aatc-atttcctct--c-cct--tacat-tgcctacatcctgtc--------t----c----c-tgt-ctt---------tt-ct
i Perodicticus_ibeanus.k141_117958                      C 0 I 13
s Perodicticus_potto.k141_713187                            20783 50 -     27972 AATC-ATTTCCTCT--C-CCT--TAAGT-TGCCTACGTCCTGTC--------T----C----C-TGT-CTT---------GT-CT
i Perodicticus_potto.k141_713187                        T 2214 I 13
s Perognathus_longimembris.PerPac_flattened_line_22291      41821 49 -     45160 AGC-CAATTACTGT--C-CCA--CA-ATGTGCTTACAAATGCTT--------T----C----C-T-T-TTT---------CT-CT
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 I 468
s Peromyscus_maniculatus.KI615518.1                       4948701 39 -   8017169 AATT-CTTTACTCA--C-CCC--TGATT-TGCATATTTCCTCTG--------C----C---------------------------
i Peromyscus_maniculatus.KI615518.1                     C 0 I 22
s Petromus_typicus.PetTyp_scaffold_33007                    10887 38 -     36578 gata-atttattgc--c-cct--tacaa-tgcctta-ttctttt--------t----a---------------------------
i Petromus_typicus.PetTyp_scaffold_33007                C 0 I 22
s Piliocolobus_badius.k141_1987485                            675 50 -      5908 AGTC-ATTTGCTCC--C-CAC--TAAGT-TTCCTACATTCTCCC--------T----C----C-TGC-CTT---------CC-CT
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       1294 50 -     17985 AGTC-ATTTGCTCC--C-CAC--TAAGT-TTCCTACATTCTCCC--------T----C----C-TGC-CTT---------CC-CT
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                             661 50 +      7694 AGTC-ATTTGCTCC--C-CAC--TAAGT-TTCCTACATTCTCCC--------T----C----C-TGC-CTT---------CC-CT
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26739139 50 +  26888534 AGTC-ATTTGCTCC--C-CAC--TAAGT-TTCCTACattctccc--------t----c----c-tgc-ctt---------cc-ct
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pithecia_albicans.k141_991845                             42273 50 -     61926 AGTC-ATTTGCTCT--C-CCC--TACGT-TTCCTATGTTGTTCT--------T----C----C-TGC-CTT---------CC-CT
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        23702 50 +     78826 AGTC-ATTTGCTCT--C-CCC--TACAT-TTCCTATGTTGTTCT--------T----C----C-TGC-CTT---------CC-CT
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              7653 50 -     15800 AGTC-ATTTGCTCT--C-CCC--TACGT-TTCCTATGTTGTTCT--------T----C----C-TGC-CTT---------CC-CT
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        10851 50 -     16101 AGTC-ATTTGCTCT--C-CCC--TACGT-TTCCTATGTTGTTCT--------T----C----C-TGC-CTT---------CC-CT
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          4160 50 +      9673 AGTC-ATTTGCTCT--C-CCC--TACGT-TTCCTATGTTGTTCT--------T----C----C-TGC-CTT---------CC-CT
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13473154 50 -  19735023 AGTC-ATTTGCTCT--C-CCC--TACGT-TTCCTATGTTGTTCT--------T----C----C-TGC-CTT---------CC-CT
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           12062 50 -     31692 AGTC-ATTTGCTCT--C-CCC--TACGT-TTCCTATGTTGTTCT--------T----C----C-TGC-CTT---------CC-CT
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       21496 50 +     44506 AGTC-ATTTGCTCT--C-CCC--TAAGT-TTCCTACATTGTCCT--------T----C----C-TGC-CTT---------CC-CT
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        21706 50 +     67491 AGTC-ATTTGCTCT--C-CCC--TAAGT-TTCCTACATTGTCCT--------T----C----C-TGC-CTT---------CC-CT
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      11947 50 -     98129 AGTC-ATTTGCTCT--C-CCC--TAAGT-TTCCTACATTGTCCT--------T----C----C-TGC-CTT---------CC-CT
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     21552 50 +    147771 AGTC-ATTTGCTCT--C-CCC--TAAGT-TTCCTACATTGTCCT--------T----C----C-TGC-CTT---------CC-CT
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        21801 50 -     23762 AGTC-ATTTGCTCT--C-CCC--TAAGT-TTCCTACATTGTCCT--------T----C----C-TGC-CTT---------CC-CT
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          2268 50 -     55515 AGTC-ATTTGCTCT--C-CCC--TAAGT-TTCCTACATTGTCCT--------T----C----C-TGC-CTT---------CC-CT
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         21621 50 +    152463 AGTC-ATTTGCTCT--C-CCC--TAAGT-TTCCTACATTGTCCT--------T----C----C-TGC-CTT---------CC-CT
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      8381 50 +      8943 AGTC-ATTTGCTCT--C-CCC--TAAGT-TTCCTACATTGTCCT--------T----C----C-TGC-CTT---------CC-CT
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                         11341 50 +    134592 AGTC-ATTTGCTCT--C-CCC--TAAGT-TTCCTACATTGTCCT--------T----C----C-TGC-CTT---------CC-CT
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          21931 50 -     75465 AGTC-ATTTGCTCT--C-CCC--TAAGT-TTCCTACATTGTCCT--------T----C----C-TGC-CTT---------CC-CT
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              185836 50 -    373494 AGTC-ATTTGCTCT--C-CCC--TAAGT-TTCCTACATtctccc--------t----c----c-tgc-ctt---------cc-ct
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19806484 50 +  19899266 agtc-atttgctct--c-ccc--taagt-ttcctacattctccc--------t----c----c-tgc-ctt---------cc-ct
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               4396 50 -     15069 AGTC-ATTTGCTCC--C-CAC--TAAGT-TTCCTACATTCTCCC--------T----C----C-TGC-CTT---------CC-CT
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              4530 50 +     14865 AGTC-ATTTGCTCC--C-CAC--TAAGT-TTCCTACATTCTCCC--------T----C----C-TGC-CTT---------CC-CT
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6847191 49 +  12164890 AATC-ATTTATTCT--C-CCC--TAACT-TGCCTACATCTCCCC--------T----C----C-TG--CTT---------TC-CT
i Prolemur_simus.MPIZ01000048.1                         C 0 I 13
s Propithecus_coquerelli.NW_012147997.1                    666401 50 -   2312742 aatc-atttattct--c-tcc--taagt-tgcctacatcccccC--------T----C----C-TG-TCTT---------TC-CT
i Propithecus_coquerelli.NW_012147997.1                 C 0 I 13
s Propithecus_coronatus.k141_1353159                         2231 50 +     11805 aatc-atttattct--c-tcc--taagt-tgcctacatcccccc--------t----c----c-tg-tctt---------tc-ct
i Propithecus_coronatus.k141_1353159                    C 0 I 13
s Propithecus_diadema.k141_577245                           41566 50 +     52369 aatc-atttattct--c-tcc--taagt-tgcctacatcccccc--------t----c----c-tg-tctt---------tc-ct
i Propithecus_diadema.k141_577245                       C 0 I 13
s Propithecus_edwardsi.k141_1317105                         33955 50 -     44753 aatc-atttattct--c-tcc--taagt-tgcctatatcccccc--------t----c----c-tg-tctt---------tc-ct
i Propithecus_edwardsi.k141_1317105                     C 0 I 13
s Propithecus_perrieri.k141_7554                            15876 50 +     27322 aatc-atttattct--c-tcc--taagt-tgcctacatcccccc--------t----c----c-tg-tctt---------tc-ct
i Propithecus_perrieri.k141_7554                        C 0 I 13
s Propithecus_tattersalli.k141_907138                       15515 50 -     53241 aatc-atttattct--c-tcc--taagt-tgcctacatcccccc--------t----c----c-tg-tctt---------tc-ct
i Propithecus_tattersalli.k141_907138                   C 0 I 13
s Propithecus_verreauxi.k141_158021                         37786 50 -     48185 aatc-atttattct--c-tcc--taagt-tgcctacatcccccc--------t----c----c-tg-tctt---------tc-ct
i Propithecus_verreauxi.k141_158021                     C 0 I 13
s Pygathrix_cinerea.k141_374971                             28519 50 +     56732 AGTC-ATTTGCTCC--C-CAC--TAAGT-TTCCTACATTCTCCC--------T----C----C-TGC-CTT---------CC-CT
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6805010 50 +   6970761 AGTC-ATTTGCTCC--C-CAC--TAAGT-TTCCTACATTCTCCC--------T----C----C-TGC-CTT---------CC-CT
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             4404 50 +     18040 AGTC-ATTTGCTCC--C-CAC--TAAGT-TTCCTACATTCTCCC--------T----C----C-TGC-CTT---------CC-CT
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rattus_norvegicus.chr11                                13914034 13 +  90463843 ---------------------------------TACCTCCCCTG--------C----A---------------------------
i Rattus_norvegicus.chr11                               C 0 I 30
s Rhinopithecus_bieti.k119_1391695                            627 50 -      1866 AGTC-ATTTGCTCC--C-CAC--TAAGT-TTCCTACATTCTCCC--------T----C----C-TGC-CTT---------CC-CT
i Rhinopithecus_bieti.k119_1391695                      C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206376284 50 - 206558726 AGTC-ATTTGCTCC--C-CAC--TAAGT-TTCCTACattctccc--------t----c----c-tgc-ctt---------cc-ct
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44855184 50 -  45163003 AGTC-ATTTGCTCC--C-CAC--TAAGT-TTCCTACATTCTCCC--------T----C----C-TGC-CTT---------CC-CT
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15671371 50 -  43202129 AGTC-ATTTGCTCT--C-CCC--TAAAT-TTCCTACATTGTCCC--------T----C----C-TGC-CTT---------TC-CT
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        3288 50 +     34089 AGTC-ATTTGCTCT--C-CCC--TAAAT-TTCCTACATTGTCCC--------T----C----C-TGC-CTT---------TC-CT
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              3229 50 -     60842 AGTC-ATTTGCTCT--C-CCC--TAAAT-TTCCTACATTGTCCC--------T----C----C-TGC-CTT---------TC-CT
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              3324 50 +     67014 AGTC-ATTTGCTCT--C-CCC--TAAAT-TTCCTACATTGTCCC--------T----C----C-TGC-CTT---------TC-CT
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              3302 50 +     60816 AGTC-ATTTGCTCT--C-CCC--TAAAT-TTCCTACATTGTCCC--------T----C----C-TGC-CTT---------TC-CT
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 3239 50 -     76454 AGTC-ATTTGCTCT--C-CCC--TAAAT-TTCCTACATTGTCCC--------T----C----C-TGC-CTT---------TC-CT
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17339942 50 -  30362882 AGTC-ATTTGCTCT--C-CCC--TAAGT-TTCCTACATTGTCCC--------T----C----C-TGC-CTT---------CC-CT
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         19317 50 -     62485 AGTC-ATTTGCTCT--C-CCC--TAAGT-CTCCTACATTGTCCC--------T----C----C-TGC-CTT---------CC-CT
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Semnopithecus_entellus.k141_1572367                        2011 50 +     15331 agtc-atttgctcc--c-cac--taagt-ttcctacattctccc--------t----c----c-tgc-ctt---------cc-ct
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       7408 50 +     20762 agtc-atttgctcc--c-cac--taagt-ttcctacattctccc--------t----c----c-tgc-ctt---------cc-ct
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         117406 50 +    130994 agtc-atttgctcc--c-cac--taagt-ttcctacattctccc--------t----c----c-tgc-ctt---------cc-ct
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           36197 50 +     46263 agtc-atttgctcc--c-cac--taagt-ttcctacattctccc--------t----c----c-tgc-ctt---------cc-ct
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     29311 50 +     42640 agtc-atttgctcc--c-cac--taagt-ttcctacattctccc--------t----c----c-tgc-ctt---------cc-ct
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        12360 50 +     30600 agtc-atttactcc--c-cac--taagt-ttcctacattctccc--------t----c----c-tgc-ctt---------cc-ct
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   98294 39 -    120886 aatt-atttattgc--c-ccc--taagt-tgcctacatcctctg--------c----t---------------------------
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 I 8
s Spermophilus_dauricus.KZ294190.1                        2238566 49 +   2842873 AATC-ATTTGCTGT--T-CCT--TAAAT-GGTGTAAATCCTCTC--------T----C----C-A-T-TTC---------CC-CT
i Spermophilus_dauricus.KZ294190.1                      C 0 I 13
s Symphalangus_syndactylus.tarseq_24                        13564 50 -  13920577 agtc-atttcccct--c-ccc--taagt-ttcctacattctccc--------t----c----c-tgc-ctt---------cc-ct
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tarsius_lariang.k141_609102                               25138 47 +     42269 catc-atttattct--c-ccc--taaat-tgcccacat---ctc--------t----c----c-tgt-cac---------cc-ct
i Tarsius_lariang.k141_609102                           C 0 I 7
s Tarsius_wallacei.k141_48636                               58454 47 +     65473 catc-atttattct--c-ccc--taaat-tgcccacat---ctc--------t----c----c-tgt-cac---------cc-ct
i Tarsius_wallacei.k141_48636                           C 0 I 7
s Theropithecus_gelada.CM009951.1                       194006422 44 - 194193292 -------TTGCTCC--C-CAC--TGAGT-TTCCTACATTCTCCC--------T----C----C-TGC-TTT---------CC-CT
i Theropithecus_gelada.CM009951.1                       I 10 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             37937 59 -     47444 gata-atttatggt--c-ctt--tacat-tgcttttatcctttc--------t----c---ct-t-t-ttttttttttcccc-ca
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 I 11
s Trachypithecus_auratus.k141_738098                        25518 50 +     38948 agtc-atttgctcc--c-cac--taagt-ttcctacattctccc--------t----c----c-tgc-ctt---------cc-ct
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   19245 50 -     32910 AGTC-ATTTGCTCC--C-CAC--TAAGT-TTCCTACATTCTCCC--------T----C----C-TGC-CTT---------CC-CT
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                       632 50 -     12939 agtc-atttgctcc--c-cac--taagt-ttcctacattctccc--------t----c----c-tgc-ctt---------cc-ct
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                        572 50 -     14244 agtc-atttgctcc--c-cac--taagt-ttcctacattctccc--------t----c----c-tgc-ctt---------cc-ct
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           41965 50 -     54611 agtc-atttgctcc--c-cac--taagt-ttcctacattctccc--------t----c----c-tgc-ctt---------cc-ct
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_878600                         795 50 +      1165 agtc-atttgctcc--c-cac--taagt-ttcctacattctccc--------t----c----c-tgc-ctt---------cc-ct
i Trachypithecus_germaini.k141_878600                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     1943 50 -     15592 agtc-atttgctcc--c-cac--taagt-ttcctacattctccc--------t----c----c-tgc-ctt---------cc-ct
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                           600 50 +     14371 agtc-atttgctcc--c-cac--taagt-ttcctacattctccc--------t----c----c-tgc-ctt---------cc-ct
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  50357 50 +     51589 agtc-atttgctcc--c-cac--taagt-ttcctacattctccc--------t----c----c-tgc-ctt---------cc-ct
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       13533 50 +     14732 agtc-atttgctcc--c-cac--taagt-ttcctacattctccc--------t----c----c-tgc-ctt---------cc-ct
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       4010 50 -     28054 agtc-atttgctcc--c-cac--taagt-ttcctacattctccc--------t----c----c-tgc-ctt---------cc-ct
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44658805 50 -  44834318 agtc-atttgctcc--c-cac--taagt-ttcctacattctccc--------t----c----c-tgc-ctt---------cc-ct
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       1108 50 +     13828 agtc-atttgctcc--c-cac--taagt-ttcctacattctccc--------t----c----c-tgc-ctt---------cc-ct
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tupaia_chinensis.KB320831.1                             2791464 49 -   3938065 aatc-attTACTTT--T-TCC--CAAGC-TGCCTgcattcctcc--------t----c----c-t-c-tct---------tc-cc
i Tupaia_chinensis.KB320831.1                           I 181 I 13
s Tupaia_tana.TupTan_flattened_line_68454                    3717 49 +     13056 aatc-atttccttt--t-tcc--caagc-tgcctgcattactcc--------t----c----c-t-c-tct---------cc-cc
i Tupaia_tana.TupTan_flattened_line_68454               I 175 I 13
s Varecia_rubra.k141_432109                                  3897 50 -     20643 agtc-atttattct--c-ccc--taagt-tgcctacatctcccc--------t----c----c-tgt-ctt---------tc-ct
i Varecia_rubra.k141_432109                             C 0 I 13
s Varecia_variegata.k141_775891                             23439 50 -     33872 agtc-atttattct--c-ccc--taagt-tgcctacatctcccc--------t----c----c-tgt-ctt---------tc-ct
i Varecia_variegata.k141_775891                         C 0 I 13
s Xerus_inauris.XerIna_scaffold_7898                       125666 49 -    134049 AATC-ATTTGCTGT--T-CCC--TAAGC-GGCCTAAATCCTCTC--------T----C----C-A-T-TTC---------CT-CT
i Xerus_inauris.XerIna_scaffold_7898                    C 0 I 13
s Zapus_hudsonius.ZapHud_scaffold_64392                     13883 39 -     20485 aatc-acttactgg--t-ccc--taaac-tgcattcgtcctctg--------t----t---------------------------
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 I 22
e Eptesicus_fuscus.JH977687.1                             4702143 415 +   6522550 I
e Macroglossus_sobrinus.MacSob_scaffold_879                699974 431 +    802869 I
e Sorex_araneus.JH798170.1                               17748590 843 -  27805282 I
e Erinaceus_europaeus.JH835290.1                         11530833 462 +  16010500 I
e Chaetophractus_vellerosus.ChaVel_scaffold_1070855          1230  0 -      1715 I
e Suricata_suricatta.SurSur_flattened_line_20339            25319 430 +     62062 I
e Ziphius_cavirostris.ZipCav_flattened_line_127025           5301 442 -      8775 I
e Zalophus_californianus.ZalCal_flattened_line_4097        212018 448 -    227762 I
e Vulpes_lagopus.VulLag_flattened_line_2045                135489 449 -    281493 I
e Vicugna_pacos.KN269600.1                                1523037 433 -   2331223 I
e Ursus_maritimus.KK498671.1                              6512543 460 +  28682327 I
e Uropsilus_gracilis.UroGra_scaffold_4143_0                 24925  0 -     25548 I
e Tursiops_truncatus.MRVK01000923.1                      69311805 441 -  96451834 I
e Trichechus_manatus.JH594618.1                          16079679 1700 +  31416278 I
e Tragulus_javanicus.TraJav_scaffold_14717                   3584 419 +     90398 I
e Tonatia_saurophila.TonSau_scaffold_3334                  134241 421 -    259118 I
e Tolypeutes_matacus.TolMat_scaffold_269431                  1990 2406 +      6782 I
e Tapirus_terrestris.TapTer_scaffold_14939                  55756 434 +     99546 I
e Tapirus_indicus.TapInd_scaffold_176                      805095 435 +   1148477 I
e Tamandua_tetradactyla.TamTet_scaffold_26877               13106 433 +     45698 I
e Tadarida_brasiliensis.TadBra_scaffold_145589               4174 407 -      6213 I
e Sus_scrofa.CM000824.4                                 189270228 447 + 218635234 I
e Spilogale_gracilis.SpiGra_flattened_line_905             232751 445 -    276980 I
e Solenodon_paradoxus.SolPar_flattened_line_1012            16376 416 +    739146 I
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   29737 434 -    114521 I
e Saiga_tatarica.SaiTat_scaffold_82192                       5983 428 +     12214 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                17647 435 +    109198 I
e Rhinolophus_sinicus.LVEH01000179.1                      1786172 430 +   2252614 I
e Rangifer_tarandus.RanTarSib_scaffold_24239                14178 431 +     68503 I
e Puma_concolor.QAVW01000427.1                          131532079 431 - 161321710 I
e Pteropus_vampyrus.KN525959.1                             602305 437 -   3946241 I
e Pteropus_alecto.KB031157.1                             13244354 438 -  17261082 I
e Pteronura_brasiliensis.PteBra_flattened_line_1343        243991 454 -    344369 I
e Pteronotus_parnellii.KE867983.1                            2230 422 -     27784 I
e Procavia_capensis.ProCapCap_scaffold_15315                74302 1939 +     78963 I
e Platanista_gangetica.PlaMin_flattened_line_72990           3771 443 +     21690 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            95224 410 +    112873 I
e Phocoena_phocoena.PhoPho_flattened_line_11948            119703 443 -    122454 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113416 447 -    135482 I
e Pantholops_hodgsonii.KE114631.1                         1064538 417 -   1292953 I
e Panthera_tigris.KE721879.1                              5025497 431 -   6340057 I
e Panthera_pardus.KV860323.1                              3635849 432 +  18214204 I
e Panthera_onca.PanOnc_flattened_line_1615                  32116 431 +    295523 I
e Ovis_canadensis.OviCan_scaffold_6251                      76891 417 +    140051 I
e Ovis_aries.CM001582.2                                 134075677 417 - 275406953 I
e Otocyon_megalotis.JAEUCK010005121.1                      305421 444 -    505867 I
e Orycteropus_afer.OryAfe_flattened_line_13509              41471 1764 -     66828 I
e Orcinus_orca.KB316965.1                                 7223086 443 -   7562323 I
e Okapia_johnstoni.LVCL01S0017931.1                         35255 573 +     78940 I
e Odocoileus_virginianus.KZ101650.1                       1078100 432 +   1425656 I
e Odobenus_rosmarus.KB229369.1                             677288 443 -   3126709 I
e Nyctereutes_procyonoides.CAJHUB010000786.1                28082 449 +   3668941 I
e Noctilio_leporinus.NocLep_scaffold_12062                  47676 415 +     94413 I
e Neophocaena_asiaeorientalis.KZ688543.1                  3949402 443 -   4490290 I
e Neomonachus_schauinslandi.NINY01007774.1                4482632 454 -  14209539 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3432 432 -      8794 I
e Myotis_myotis.MyoMyo_scaffold_6123                         8554 416 +     66751 I
e Myotis_lucifugus.GL429887.1                             3463359 417 -   3747815 I
e Myotis_davidii.KB114863.1                               5017463 416 +   6462685 I
e Myotis_brandtii.KE161952.1                               965772 418 +   8389877 I
e Mustela_putorius.JH417978.1                             4421898 453 -  28371801 I
e Murina_feae.MurFea_scaffold_2254                          17451 414 -    100666 I
e Mungos_mungo.MunMun_flattened_line_8729                  142653 430 -    168139 I
e Moschus_moschiferus.MosMos_scaffold_146101                 2972 432 -      4346 I
e Mormoops_blainvillei.MorMeg_scaffold_2952                159560 424 +    265003 I
e Monodon_monoceros.MonMon_M_scaffold_5598                 144790 442 +    154973 I
e Mirounga_angustirostris.MirAng_flattened_line_8852         9033 661 -    104932 I
e Miniopterus_schreibersii.MinSch_scaffold_24116            32480 421 +     45743 I
e Miniopterus_natalensis.LDJU01000022.1                   8207809 420 +  10048721 I
e Micronycteris_hirsuta.MicHir_scaffold_37978               21050 428 -     32043 I
e Microgale_talazaci.MicTal_scaffold_34660                  29351 1133 -     48017 I
e Mellivora_capensis.MelCap_flattened_line_146202             327 452 -      1999 I
e Megaderma_lyra.MegLyr_scaffold_3562                       62628 576 -    234502 I
e Manis_pentadactyla.KN017078.1                             34538 441 +     58827 I
e Manis_javanica.JSZB01003966.1                            144466 438 +    252755 I
e Lycaon_pictus.CM007556.1                               11085089 449 +  39895028 I
e Loxodonta_africana.GL010040.1                          20589215 1702 -  62548349 I
e Lipotes_vexillifer.KE558548.1                            134353 444 +   3060487 I
e Leptonychotes_weddellii.KB714749.1                      3083728 458 -   3498232 I
e Lasiurus_borealis.LasBor_scaffold_5102                   111937 417 -    115756 I
e Kogia_breviceps.KogBre_flattened_line_35920               22021 443 +     37189 I
e Inia_geoffrensis.IniGeo_flattened_line_66725               7195 437 +     17520 I
e Hyaena_hyaena.HyaHya_flattened_line_20729                 14013 474 -     67322 I
e Hipposideros_galeritus.HipGal_scaffold_104691              5946 409 -      9143 I
e Hipposideros_armiger.JXIK01001085.1                      276788 408 -    477199 I
e Hippopotamus_amphibius.HipAmp_scaffold_1308              145449 430 +    277961 I
e Heterohyrax_brucei.HetBruBak_scaffold_25354               54438 1939 +     73687 I
e Hemitragus_hylocrius.HemHyl_scaffold_16669                25884 416 -     91191 I
e Helogale_parvula.HelPar_flattened_line_22962              14960 432 +     53719 I
e Giraffa_tippelskirchi.LVKQ01S012154.1                    179385 717 -    189561 I
e Felis_nigripes.FelNig_flattened_line_8080                 18925 427 +     52776 I
e Felis_catus_fca126.CM031420.1                         129277790 427 - 158578461 I
e Eubalaena_japonica.EubJap_flattened_line_7756             59838 466 +     89355 I
e Eschrichtius_robustus.EscRob_flattened_line_685          313408 442 +    330699 I
e Equus_przewalskii.ATBW01073585.1                          11036 704 +     92910 I
e Equus_caballus.CM000402.2                              13349546 704 +  41866177 I
e Equus_asinus.JREZ01000062.1                             5851044 703 -   7175178 I
e Enhydra_lutris.KZ291749.1                              85869516 453 +  99434291 I
e Elephantulus_edwardii.JH947210.1                        7804622 10712 +  15467074 I
e Elaphurus_davidianus.JRFZ01086400.1                     1489870 432 +   1727528 I
e Eidolon_helvum.KE772537.1                                 10556 435 +     24177 I
e Echinops_telfairi.JH980316.1                           22994071  0 -  44670279 C
e Diceros_bicornis.DicBicMic_scaffold_9545                    953 1024 +    151128 I
e Dicerorhinus_sumatrensis.PEKH010003161.1                 320309 1016 +    993696 I
e Desmodus_rotundus.KZ672188.1                           18697183 419 -  18957592 I
e Delphinapterus_leucas.KZ290064.1                       80035206 438 -  96802777 I
e Dasypus_novemcinctus.JH568778.1                          180040 2424 -   6883506 I
e Cryptoprocta_ferox.CryFer_flattened_line_19014            49751 433 -     70449 I
e Crocidura_indochinensis.CroInd_scaffold_38409             18067 408 -     19186 I
e Craseonycteris_thonglongyai.CraTho_scaffold_22679         37588 826 -     40477 I
e Condylura_cristata.JH655880.1                          60611131 297 +  78930452 I
e Choloepus_hoffmanni.KN194586.1                           760141 439 +    964067 I
e Choloepus_didactylus.ChoDid_scaffold_36182                14830 439 -     21363 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_160623         1406 1024 -      9338 I
e Catagonus_wagneri.CatWag_scaffold_1305                   157166 412 -    276539 I
e Carollia_perspicillata.CarPer_scaffold_4436               57873 420 +     67245 I
e Capra_hircus.CM004562.1                               135704839 417 - 157403528 I
e Capra_aegagrus.CM003214.1                              21323612 417 + 157394656 I
e Canis_lupus_orion.HG994411.1                           16452657 449 -  44759192 I
e Canis_lupus_familiaris.chr31                           11085633 449 +  39895921 I
e Canis_lupus_dingo.QKWQ01001993.1                       11263104 449 -  35597290 I
e Canis_lupus_VD.CanFam_VD_scaffold_16982                   11461 449 +     87036 I
e CanFam4.chr31                                          11516443 449 +  39901454 I
e Camelus_ferus.KB016973.1                                2971365 436 +   6889770 I
e Camelus_dromedarius.KN271192.1                           395631 437 -  15254737 I
e Camelus_bactrianus.KN276303.1                           3217927 436 -   8989139 I
e Bubalus_bubalis.KI419065.1                              1229342 431 -   1914593 I
e Bos_taurus.CM000177.6                                 136293586 432 - 158972876 I
e Bos_mutus.JH883513.1                                     570227 432 -    998990 I
e Bos_indicus.CM003021.1                                138137853 432 - 161108492 I
e Bison_bison.KN264915.1                                  6557614 432 +   6870073 I
e Beatragus_hunteri.BeaHun_scaffold_21644                   41603 412 -     72089 I
e Balaenoptera_bonaerensis.DF502048.1                        3753 444 -     13118 I
e Balaenoptera_acutorostrata.KI537095.1                  26378522 443 +  51448160 I
e Artibeus_jamaicensis.ArtJam_scaffold_41619                 7075 421 -     29036 I
e Antilocapra_americana.AntAmePen_scaffold_42841            29107 427 +     33004 I
e Anoura_caudifer.AnoCau_scaffold_422                      388679 416 -    631301 I
e Ammotragus_lervia.NIVO01013474.1                        3518508 445 +   4113121 I
e Ailurus_fulgens.LNAC01000003.1                          7091784 657 -  16596857 I
e Ailuropoda_melanoleuca.LNAT01000321.1                  10655057 459 +  23371972 I
e Acinonyx_jubatus.LLWD01000356.1                         2031739 430 +   3721120 I
e Hylobates_pileatus_a.tarseq_592                             30921 2351 -     60944 I
e Hylobates_pileatus_b.ContigUN                                 14622428 998 -  25970782 I
e Hylobates_muelleri.k141_1133650                            2317  0 -      2775 I
e Hylobates_klossii.k141_466549                              9327 960 +     11537 I
e Hylobates_agilis.k141_1485652                              1303  0 -      1697 I
e Hylobates_abbotti.k141_493872                              2882 965 +      5897 I
e Psammomys_obesus.NESX01026517.1                           32070  0 +     77221 C
e Meriones_unguiculatus.MerUng_scaffold_52233               10520  0 +     15977 C
e Acomys_cahirinus.AcoCah_scaffold_1625                    111065  0 -    189883 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               10601 36 +    209709 ACAAGC----------------TCCTAAATCTCAC---------T-GGGGTT----TTTT-CT----------------TGGT
s Acomys_cahirinus.AcoCah_scaffold_1625                    111065 10 -    189883 ------------------------------------------------GCTT-----G-T-GG----------------CT--
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   11627 33 -     22067 atgagc----------------tcctcaatctcac---------tgagtttc-----t-t-gc----------------tc--
i Allactaga_bullata.AllBul_scaffold_70162               I 22 C 0
s Allenopithecus_nigroviridis.k141_3103728                   1208 36 +      1665 ATAAGC----------------TCCTAAATCTAAC---------T-GGGGTT----TTTT-CT----------------TGGT
i Allenopithecus_nigroviridis.k141_3103728              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                          684 36 -     29318 ATAAGC----------------TCCTTAATCTAAC---------T-GGGgtt----tttt-ct----------------tggt
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_21674                            901 36 -      1421 ATAAGC----------------TCCTTAATCTAAC---------T-GGGgtt----tttt-ct----------------tggt
i Allochrocebus_preussi.k141_21674                      I 44 C 0
s Allochrocebus_solatus.k141_371672                           578 36 -     80423 ATAAGC----------------TCCTTAATCTAAC---------T-GGGgtt----tttt-ct----------------tggt
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             8867 36 -     18050 ATAAGA----------------TCCTAAATCTCAC---------T-GGGTTT----ATTT-GT----------------TGTT
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                  9980 36 -     11521 ATAAGA----------------TCCTAAATCTCAC---------T-GGGTTT----ATTT-GT----------------TGTT
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              9544 36 -     21359 ATAAGA----------------TCCTAAATCTCAC---------T-GGGTTT----ATTT-GT----------------TGTT
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_298055                                  835 36 +      1823 ATAAGA----------------TCCTAAATCTCAC---------T-GGGTTT----ATTT-AT----------------TGTT
i Alouatta_juara.k141_298055                            C 0 C 0
s Alouatta_macconnelli.k141_1331706                          8835 36 -     10438 ATAAGA----------------TCCTAAATCTCAC---------T-GGgttt----attt-at----------------tgtt
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            5491 36 +      7047 ATAAGA----------------TCCTAAATCTCAC---------T-GGGTTT----ATTT-AT----------------TGTT
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             8776 36 +     10410 ATAAGA----------------TCCTAAATCTCAC---------T-GGGTTT----ATTT-GT----------------TGTT
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            2581 36 -      4927 ATAAGA----------------TCCTAAATCTCAC---------T-GGgttt----attt-at----------------tgtt
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             5510 36 +      6429 ATAAGA----------------TCCTAAATCTCAC---------T-GGGTTT----ATTT-AT----------------TGTT
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Aotus_azarae.k141_3170768                                 61233 35 +     78111 TTAAGA----------------TCCCAAATCTCAC---------T--GGTTT----ATTT-GT----------------TGTT
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            4174 35 +     22701 TTAAGA----------------TCCCAAATCTCAC---------T--GGTTT----ATTT-GT----------------TGTT
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5748131 35 +   9889416 ttAAGA----------------TCCCAAATCTCAC---------T--GGTTT----ATTT-GT----------------TGTT
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             4716 35 -    104377 ATAAGA----------------TCCCAAATCTCAC---------T--GGTTT----ATTT-GT----------------TGTT
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               4722 35 +     23246 ATAAGA----------------TCCCAAATCTCAC---------T--GGTTT----ATTT-GT----------------TGTT
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     2541 32 +      5067 atgagc----------------tctgaaataatgc---------t-gg-gtt----tt-c-aa----------------tt--
i Aplodontia_rufa.AprRuf_scaffold_156013                I 12 C 0
s Arctocebus_calabarensis.k141_1161114                      16535 33 +     17483 ATGAGG----------------TCATAAATCTCTC---------A-GG---G----TTGT-TT----------------TGAT
i Arctocebus_calabarensis.k141_1161114                  I 13 I 4
s Ateles_geoffroyi_b.tarseq_2582                             9537967 36 +  39197703 ATAGGA----------------TCCTAAATCTCAC---------T-GGGTTT----ATTT-GT----------------TGTT
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             59251 36 +     85812 ATAGGA----------------TCCTAAATCTCAC---------T-GGGTTT----ATTT-GT----------------TGTT
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                10250 36 +     89302 ATAGGA----------------TCCTAAATCTCAC---------T-GGGTTT----ATTT-GT----------------TGTT
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             14755 36 -     58268 ATAGGA----------------TCCTAAATCTCAC---------T-GGGTTT----Attt-gt----------------tgtt
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             62746 36 +    119057 ATAGGA----------------TCCTAAATCTCAC---------T-GGGTTT----ATTT-GT----------------TGTT
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               4715 36 -     25888 ATAGGA----------------TCCTAAATCTCAC---------T-GGGTTT----Attt-gt----------------tgtt
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 5365 49 -     16375 ataagc----------------tcttaaatctcac---------t-cttttc----tttt-ttcttttcccttttttt-tt--
i Avahi_laniger.k141_2840928                            I 20 C 0
s Avahi_peyrierasi.k141_2689020                              1684 49 +      2719 ataagc----------------tcttaaatctcac---------t-cttttc----tttt-ttcttttcccttttttt-tt--
i Avahi_peyrierasi.k141_2689020                         I 20 C 0
s Cacajao_ayresi.k141_724503                               112609 36 -    171031 ATAAGA----------------TCCTAAATCTCAC---------T-AGgttt----attt-gt----------------tgtt
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 11635 36 +    125063 ATAAGA----------------TCCTAAATCTCAC---------T-AGGTTT----ATTT-GT----------------TGTT
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                13683 36 -    216513 ATAAGA----------------TCCTAAATCTCAC---------T-AGgttt----attt-gt----------------tgtt
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        6223 36 -    134917 ATAAGA----------------TCCTAAATCTCAC---------T-AGgttt----attt-gt----------------tgtt
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Capromys_pilorides.CapPil_scaffold_979108                   661 32 -      1248 gtgagc----------------cactaaatctcac---------t-gg-gtt----ct-t-ga----------------tc--
i Capromys_pilorides.CapPil_scaffold_979108             I 13 C 0
s Carlito_syrichta.NW_007248099.1                          307709 13 +    345090 -------------------------------------------------tac----tgtt-tt----------------tgtt
i Carlito_syrichta.NW_007248099.1                       I 7 C 0
s Castor_canadensis.CasCan_scaffold_47037                   29386 34 +     33760 gtgagc----------------ccctaaatctcac---------a-gggctt----CT-AAGG----------------TC--
i Castor_canadensis.CasCan_scaffold_47037               I 253 C 0
s Cavia_aperea.AVPZ01000278.1                            15785308 32 -  24422027 AAGGGC----------------CCCTAAATCTCAC---------T-GG-gtt----tt-t-gg----------------tc--
i Cavia_aperea.AVPZ01000278.1                           I 13 C 0
s Cavia_porcellus.DS562889.1                             15797242 32 -  24440124 aagggc----------------ccctaaatctcac---------t-gg-gtt----tt-t-gg----------------tc--
i Cavia_porcellus.DS562889.1                            I 13 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       175433 32 +    436027 aagggc----------------ccctaaatctcac---------t-gg-gtt----tt-t-gg----------------tc--
i Cavia_tschudii.CavTsc_scaffold_488                    I 13 C 0
s Cebus_albifrons.Contig22                               18889465 36 -  29618158 ataaga----------------tcctaaatctcac---------t-gggttt----attt-gt----------------cgtt
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 7009 36 -     26817 ATAAGA----------------TCCTAAATCTCAC---------T-GGGTTT----Attt-gt----------------cgtt
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                11249 36 +     25043 ATAAGA----------------TCCTAAATCTCAC---------T-GGGTTT----ATTT-GT----------------CGTT
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         6742 13 +     21754 -------------------------------------------------tac----tgtt-tt----------------tgtt
i Cephalopachus_bancanus.k141_702587                    I 7 C 0
s Cercocebus_atys.KQ010443.1                              6553900 36 +   6739814 ATGAGC----------------TCCTAAATCTAAC---------T-GGGGTT----TTTT-CT----------------TGgc
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      25377 36 +     60454 ATGAGC----------------TCCTAAATCTAAC---------T-GGGGTT----TTTT-CT----------------TGGC
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                           582 36 -     21101 ATGAGC----------------TCCTAAATCTAAC---------T-GGGGTT----TTTT-CT----------------TGGC
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         57892 36 -    107033 ATGAGC----------------TCCTAAATCTAAC---------T-GGGGTT----TTTT-CT----------------TGGC
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                         793 36 -     17608 GTAAGC----------------TCCTAAATCTAAC---------T-GGGgtt----tttt-ct----------------tggt
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          28291 36 +     30494 GTAAGC----------------TCCTAAATCTAAC---------T-GGGTTT----TTTT-CT----------------TGGT
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          57134 36 -     59240 ATAAGC----------------TCCTAAATCTAAC---------T-GGGgtt----tttt-ct----------------tggt
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                           835 36 +     16677 GTAAGC----------------TCCTAAACCTAAC---------T-GGGGTT----TTTT-CT----------------TGGT
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           22993 36 +     35983 GTAAGC----------------TCCTAAATCTAAC---------T-GGGGTT----TTTT-CT----------------TGGT
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11989524 36 +  12117833 GTAAGC----------------TCCTAAATCTAAC---------T-GGGGTT----TTTT-CT----------------TGGT
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46476279 36 +  46592721 ATAAGC----------------TCCTAAACCTAAC---------T-GGGGTT----TTTT-CT----------------TGGT
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      39830 36 -     45581 GTAAGC----------------TCCTAAATCTAAC---------T-GGGgtt----tttt-ct----------------tggt
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                        839 36 +     35577 GTAAGC----------------TCCTAAATCTAAC---------T-GGGGTT----TTTT-CT----------------TGGT
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                         612 36 -     25661 GTAAGC----------------TCCTAAATCTAAC---------T-GGGgtt----tttt-ct----------------tggt
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                         590 36 -     17744 GTAAGC----------------TCCTAAATCTAAC---------T-GGGGTt----tttc-ct----------------tggt
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        20199 36 +     37128 ATAAGC----------------TCCTAAATCTAAC---------T-GGGGTT----TTTT-CT----------------TGGT
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           57670 41 -     68416 ataagc----------------tcctaaatctcac---------t-gttttc----tttt--tcttttcct--------tt--
i Cheirogaleus_major.k141_1157592                       I 13 C 0
s Cheirogaleus_medius.k141_133808                            6713 41 +     13308 ataagc----------------tcctaaatctcac---------t-gttttc----tttt--tcttttcct--------tt--
i Cheirogaleus_medius.k141_133808                       I 13 C 0
s Cheracebus_lucifer.k141_619653                             4259 36 -     18223 ATAAGA----------------TCCTAAATCTCAC---------T-GGgttt----attt-at----------------tgtt
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             21282 36 +     25473 ATAAGA----------------TCCTAAATCTCAC---------T-GGGTTT----ATTT-AT----------------TGTT
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           40317 36 +     57117 ATAAGA----------------TCCTAAATCTCAC---------T-GGGTTT----ATTT-AT----------------TGTT
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          44996 36 +     54541 ATAAGA----------------TCCTAAATCTCAC---------T-GGGTTT----ATTT-AT----------------TGTT
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15960452 32 +  43084221 aggagc----------------tcctaaatctcac---------t-gg-gtt----ct-t-ga----------------tc--
i Chinchilla_lanigera.JH721867.1                        I 13 C 0
s Chiropotes_israelita.k141_1189915                         69818 36 +    196370 ATAAGA----------------TCCTAAATCTCAC---------T-AGGTTT----ATTT-GT----------------TGTT
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          13998 36 +     40510 ATAAGA----------------TCCTAAATCTCAC---------T-AGGTTT----ATTT-GT----------------TGTT
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15137744 36 -  15256731 ATAAGC----------------TCCTTAATCTAAC---------T-GGAgtt----ttct-ct----------------tggt
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      32791 36 -     53260 ATAAGC----------------TCCTTAATCTAAC---------T-GGAgtt----ttct-ct----------------tggt
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101143354 36 + 101219884 ATAAGC----------------TCCTTAATCTAAC---------T-GGGGTT----TTCT-CT----------------TGgt
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10885119 36 +  10971483 gtAAGC----------------TCCTAAATCTAAC---------T-GGGGTT----TTTT-CT----------------TGGT
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147663283 36 + 156195979 gtaagc----------------tcctaaatctaac---------t-ggggtt----tttt-ct----------------tggt
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            15267 36 +     23629 ataagc----------------tcctaaatctaac---------t-ggggtt----tttt-ct----------------tggt
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Cricetulus_griseus.LT883672.1                          53027694 33 +  72327488 ACAAGC----------------CGCTCATTCCCACT--------C-ATGCTT-----G-t-ga----------------ct--
i Cricetulus_griseus.LT883672.1                         I 22 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  206870 32 -    956709 ctgagc----------------gcttctatctcc----------t-gtggtc----tt-t-ga----------------tc--
i Ctenodactylus_gundi.CteGun_scaffold_447               I 13 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 29430 32 -     67205 atgagg----------------cactaaatttcac---------t-gg-gct----cc-t-ga----------------tc--
i Ctenomys_sociabilis.CteSoc_scaffold_19489             I 13 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                16462 32 +     26546 acgact----------------tccaaaatctcat---------t-gg-gtt----tt-t-ga----------------tc--
i Cuniculus_paca.CunPac_flattened_line_16637            I 13 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             57556 28 -    236241 acaagc----------------tcctaaatc-------------t-ga-gtt----tt-t-ga----------------ta--
i Dasyprocta_punctata.DasPun_flattened_line_634         I 23 C 0
s Daubentonia_madagascariensis.ctg11                     16843529 34 +  31942871 ttaagc----------------tcctaaatctcgc---------t-gttttt----tgtt-tt----------------tg--
i Daubentonia_madagascariensis.ctg11                    I 24 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   156337 19 +    228994 gtgagt----------------tcctaaatctcac------------------------------------------------
i Dinomys_branickii.DinBra_scaffold_1996                I 18 I 54
s Dipodomys_ordii.KN672545.1                              3654899 32 +   4240102 ACTAGC----------------CC-TTAATTTCAC---------T-Ggattt----ct-t-gg----------------ac--
i Dipodomys_ordii.KN672545.1                            I 234 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 26535 32 +     28912 ACTAGC----------------CC-TTAATTTCAC---------T-GGATTT----CT-T-GG----------------AC--
i Dipodomys_stephensi.DipSte_scaffold_44365             I 232 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                34801 32 -     73477 aagagc----------------ccctaaatctcac---------t-ag-att----tt-t-ga----------------tc--
i Dolichotis_patagonum.DolPat_scaffold_14102            I 24 C 0
s Ellobius_talpinus.LOJH01090055.1                           5362 33 -      7838 ACAGGC----------------TGCTCACTCCCTTT--------A-ATGCTT-----G-t-gg----------------ct--
i Ellobius_talpinus.LOJH01090055.1                      I 22 C 0
s Erythrocebus_patas.Contig8                             48769924 36 -  48907691 ATAAGC----------------TCCTTAATCTAAC---------T-GGGgtt----tttt-ct----------------tggt
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eulemur_albifrons.k141_715837                              3714 43 +     13586 ataagc----------------ttctcaatctcac---------t-gttttct---tttt-ttcttttcgt--------tt--
i Eulemur_albifrons.k141_715837                         I 13 C 0
s Eulemur_collaris.k141_311830                               3648 43 -      6809 ataagc----------------tcctcaatctcac---------t-gttttct---tttt-ttcttttcat--------tt--
i Eulemur_collaris.k141_311830                          I 12 C 0
s Eulemur_coronatus.k141_3240342                            10124 43 +     36558 ataagc----------------tcctcaatctcac---------t-gttttct---tttt-ttcttttcgt--------tt--
i Eulemur_coronatus.k141_3240342                        I 13 C 0
s Eulemur_flavifrons.k141_903901                             6440 43 +     60246 ataagc----------------tcctcaatctcac---------t-gttttct---tttt-ttcttttcgt--------tt--
i Eulemur_flavifrons.k141_903901                        I 13 C 0
s Eulemur_fulvus.k141_653297                                 9922 43 +    109717 ataagc----------------ttctcaatgtcac---------t-gttttct---tttt-ttcttttcgt--------tt--
i Eulemur_fulvus.k141_653297                            I 13 C 0
s Eulemur_macaco.k141_1341545                               14302 43 +     16540 ataagc----------------tcctcaatctcac---------t-gttttct---tttt-ttcttttcgt--------tt--
i Eulemur_macaco.k141_1341545                           I 13 C 0
s Eulemur_mongoz.k141_825972                                14574 43 +     27497 ataagc----------------ttctcaatctcac---------t-gttttct---tttt-ttcttttcat--------tt--
i Eulemur_mongoz.k141_825972                            I 13 C 0
s Eulemur_rubriventer.k141_411740                           17034 43 +     26808 ataagc----------------tcctcaatctcac---------t-gttttct---tttt-ttcttttcgt--------tt--
i Eulemur_rubriventer.k141_411740                       I 13 C 0
s Eulemur_rufus.k141_1620292                                31766 44 +     46535 ataagc----------------tcctcaatctcac---------t-gttttct---tttt-ttcttttcatt-------tt--
i Eulemur_rufus.k141_1620292                            I 12 C 0
s Eulemur_sanfordi.k141_186399                              14489 43 -     29447 ataagc----------------tcctcaatctcac---------t-gttttct---tttt-ttcttttcat--------tt--
i Eulemur_sanfordi.k141_186399                          I 12 C 0
s Fukomys_damarensis.KN123630.1                          13891403 31 -  19261668 -tgagt----------------tcttaaatctcac---------t-gg-gtt----tt-t-ga----------------tc--
i Fukomys_damarensis.KN123630.1                         I 8 C 0
s Galago_moholi.ctg555                                     209621 36 -    847004 atgagg----------------tcctaaatctctc---------g-ggattg----ttgt-tt----------------tgat
i Galago_moholi.ctg555                                  I 13 I 4
s Galago_senegalensis.k141_964197                           12000 36 -     43889 ataagg----------------tcctaaatctctc---------g-ggattg----ttgt-tt----------------tgat
i Galago_senegalensis.k141_964197                       I 13 I 4
s Galagoides_demidoff.k141_1769638                           9069 36 +     27357 atgagg----------------tcttaaatctctt---------g-gggttg----ttgt-tt----------------tgat
i Galagoides_demidoff.k141_1769638                      I 10 I 4
s Galeopterus_variegatus.GalVar_scaffold_354               154970 34 +    324696 ataaat----------------tcctaaatctcaa---------t-gttttt----tttt-tt----------------tt--
i Galeopterus_variegatus.GalVar_scaffold_354            I 13 C 0
s Glis_glis.GliGli_scaffold_79770                           11352 33 -     18683 atgagt----------------tcctaaatctcac---------c-ggagtt----tt-t-tg----------------tc--
i Glis_glis.GliGli_scaffold_79770                       I 13 C 0
s Gorilla_beringei.k141_111300                               4001 35 -     14630 ataagc----------------tcctaaatctcac---------t-gggttt----tt-t-ct----------------tggt
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119651100 35 - 195582420 ataagc----------------tcctaaatctcac---------t-gggttt----tt-t-ct----------------tggt
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   76099 33 +    118900 acaagc----------------tcctaagtctcac---------t-ggagtt----tt-t-gg----------------tc--
i Graphiurus_murinus.GraMur_scaffold_4493               I 13 C 0
s Hapalemur_alaotrensis.k141_1280836                          537 43 +     10286 ataagc----------------tcctaaatctcac---------t-gttttct---ttgt-ttcttttcct--------tt--
i Hapalemur_alaotrensis.k141_1280836                    I 13 C 0
s Hapalemur_gilberti.k141_1254239                            8687 43 +      9690 ataagc----------------tcttaaatctcac---------t-gttttct---tttt-ttcttttcct--------tt--
i Hapalemur_gilberti.k141_1254239                       I 13 C 0
s Hapalemur_griseus.k141_1387522                             4316 43 +     56096 ataagc----------------tcttaaatctcac---------t-gttttct---tttt-ttcttttcct--------tt--
i Hapalemur_griseus.k141_1387522                        I 13 C 0
s Hapalemur_meridionalis.k141_186231                        27592 43 -     42470 ataagc----------------tcctaaatctcac---------t-gttttct---tttt-ttcttttcct--------tt--
i Hapalemur_meridionalis.k141_186231                    I 13 C 0
s Hapalemur_occidentalis.k141_797938                        44190 43 -     54384 ataagc----------------tcctaaatctcac---------t-gttttct---tttt-ttcttttcct--------tt--
i Hapalemur_occidentalis.k141_797938                    I 13 C 0
s Heterocephalus_glaber.JH602058.1                        2549798 32 +  31725842 atgagc----------------tcctaaatctcac---------t-gg-att----tt-t-ga----------------tc--
i Heterocephalus_glaber.JH602058.1                      I 11 C 0
s Hoolock_leuconedys.ctg2405                                   14032 36 -     15084 ataagc----------------tcctaaatctcac---------t-ggggtt----tttt-ct----------------tggt
i Hoolock_leuconedys.ctg2405                               C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           17703 32 -    119109 aagagc----------------ccctaaatctcac---------t-ag-att----tg-t-ga----------------tc--
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       I 13 C 0
s Hylobates_abbotti.k141_493872                              3847 10 +      5897 ---------------------------------------------------T----GGTG-TT----------------TTG-
i Hylobates_abbotti.k141_493872                         I 965 I 10
s Hylobates_agilis.k141_624065                                711 10 +      2112 ---------------------------------------------------T----GGTG-TT----------------TTG-
i Hylobates_agilis.k141_624065                          I 264 C 0
s Hylobates_klossii.k141_466549                             10287 10 +     11537 ---------------------------------------------------T----GGTG-TT----------------TTG-
i Hylobates_klossii.k141_466549                         I 960 C 0
s Hylobates_muelleri.k141_1389047                             648 10 -      2977 ---------------------------------------------------t----ggtg-tt----------------ttg-
i Hylobates_muelleri.k141_1389047                       I 264 I 10
s Hylobates_pileatus_a.tarseq_592                             33272 11 -     60944 ---------------------------------------------------t----tttg-tt----------------ttgt
i Hylobates_pileatus_a.tarseq_592                         I 2351 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     4852 32 +     22540 atgagg----------------ttctgaatctcac---------t-gg-gtt----tt-t-ca----------------tc--
i Hystrix_cristata.HysCri_scaffold_50788                I 13 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7124712 19 +  13083262 ATGAGC----------------TTTGAaatctcat------------------------------------------------
i Ictidomys_tridecemlineatus.JH393315.1                 I 13 C 0
s Indri_indri.k141_4418183                                    129 49 -      1457 ATAAGC----------------TTCTAAATCTCtc---------t-tttttc----tttt-atcttttcctttttttt-tt--
i Indri_indri.k141_4418183                              N 0 C 0
s Jaculus_jaculus.JH725517.1                              8564371 32 +  11848649 ATGAGC----------------TCCTCAATCTCAC---------T-AGTTTC-----T-T-GA----------------TC--
i Jaculus_jaculus.JH725517.1                            I 22 C 0
s Lagothrix_lagothricha.k141_12968                          48836 36 -    147782 ATAAGA----------------TCCTAAATCTCAC---------T-GGGTTT----Attt-gc----------------tgtt
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lemur_catta.scaffold_1                                258405872 43 - 285822530 ataagc----------------tcctaaatctcac---------t-gttttct---tttt-ttcttttcct--------tt--
i Lemur_catta.scaffold_1                                I 13 C 0
s Lepilemur_ankaranensis.k141_884009                        22643 22 +     39228 ataagc----------------tcctaaatctcac---------t-gt-----------------------------------
i Lepilemur_ankaranensis.k141_884009                    I 13 I 13
s Lepilemur_dorsalis.k141_134267                            52018 22 +     63517 ataagc----------------tcctaaatctcac---------t-gt-----------------------------------
i Lepilemur_dorsalis.k141_134267                        I 13 I 13
s Lepilemur_ruficaudatus.k141_617879                        77261 42 +    116806 ataagc----------------tcctaaatcgcac---------t-gttttc----tttt-ttcttttcct--------tt--
i Lepilemur_ruficaudatus.k141_617879                    I 13 C 0
s Lepilemur_septentrionalis.k141_578524                     30282 22 -     33031 ataagc----------------tcctaaatctcac---------t-gt-----------------------------------
i Lepilemur_septentrionalis.k141_578524                 I 13 I 13
s Lepus_americanus.LepAme_scaffold_62849                    11680 34 +     22452 aaaagc----------------tcccaaatctcac---------t-ggatct----tttc-gt----------------tc--
i Lepus_americanus.LepAme_scaffold_62849                I 13 C 0
s Lophocebus_aterrimus.ctg55                             19246989 36 +  19376315 ATAAGC----------------TCCTAAATCTAAC---------T-GGGGTT----TTTT-CT----------------TGGC
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            9385 36 +     84689 atgagg----------------tcatcaatctttt---------g-gggttg----ttgt-tt----------------tgat
i Loris_lydekkerianus.k141_550999                       I 13 I 4
s Loris_tardigradus.ctg97                                 3777134 36 +   6799190 atgagg----------------tcatcaatctttt---------g-gggttg----ttgt-tt----------------tgat
i Loris_tardigradus.ctg97                               I 13 I 4
s Macaca_arctoides.k141_2201161                             18668 36 +     74745 ATAAGC----------------TCCTAAATCTAAC---------T-GGGGTT----TTTT-CT----------------TGGT
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12705185 36 +  12821369 ATAAGC----------------TCCTAAATCTAAC---------T-GGGGTT----TTTT-CT----------------TGGT
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                 830 36 -      3136 ATAAGC----------------TCCTAAATCCAAC---------T-GGGgtt----tttt-ct----------------tggt
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           45581 36 +     63263 ATAAGC----------------TCCTAAATCTAAC---------T-GGGGTT----TTTT-CT----------------TGGT
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                  347 36 -      2568 ATAAGC----------------TCCTAAATCTAAC---------T-GGGgtt----tttt-ct----------------tggt
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                  855 36 -      7381 ATAAGC----------------TCCTAAATCTAAC---------T-GGGgtt----tttt-ct----------------tggt
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  44092 36 -     79256 ATAAGC----------------TCCTAAATCTAAC---------T-GGGgtt----tttt-ct----------------tggt
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196034262 36 + 196197964 aTAAGC----------------TCCTAAATCTAAC---------T-GGGGTT----TTTT-CT----------------TGgt
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11444367 36 +  11645122 aTAAGC----------------TCCTAAATCTAAC---------T-GGGGTT----TTTT-CT----------------TGgt
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   3039 36 -     46448 ATAAGC----------------TCCTAAATCTAAC---------T-GGGgtt----tttt-ct----------------tggt
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                 711 36 -     13212 ATAAGC----------------TCCTAAATCTAAC---------T-GGGgtt----tttt-ct----------------tggt
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 14453 36 -     55006 ATAAGC----------------TCCTAAATCTAAC---------T-GGGgtt----tttt-ct----------------tggt
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43839490 36 +  43892939 ATAAGC----------------TCCTAAATCTAAC---------T-GGGGTT----TTTT-CT----------------TGGT
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               15740 36 -     24607 ATAAGC----------------TCCTAAATCTAAC---------T-GGGgtt----tttt-ct----------------tggt
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               3044 36 -     27140 ATAAGC----------------TCCTAAATCTAAC---------T-GGGgtt----tttt-ct----------------tggt
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43436148 36 -  43563597 ATAAGC----------------GCCTAAATCTAAC---------T-GGGGTT----TTTT-CT----------------TGGC
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4448974 36 -   4543643 ataagc----------------gcctaaatctaac---------t-ggggtt----tttt-ct----------------tggc
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36872547 23 +  64221397 ATGAGC----------------TTTGAAAtctcat---------t-g---tt-------------------------------
i Marmota_marmota.CZRN01000005.1                        I 13 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               10520 10 +     15977 ------------------------------------------------GCTT-----G-T-GG----------------CT--
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1045432 33 -  26018355 ACAAGC----------------TGCTCATTCCCACT--------T-AGGCTT-----G-T-GG----------------CT--
i Mesocricetus_auratus.KB708139.1                       I 22 C 0
s Microcebus_murinus.CM007691.1                          16508886 36 +  47401472 ATAAGC----------------TCCTACATctcac---------t-gttttc----tttt--cctt-------------tt--
i Microcebus_murinus.CM007691.1                         I 13 I 3
s Microtus_ochrogaster.CM001673.1                        22818552 33 -  98408828 ACAGGC----------------TGCTCACTCCCCTT--------A-ATGCTT-----G-t-gg----------------ct--
i Microtus_ochrogaster.CM001673.1                       I 22 C 0
s Miopithecus_ogouensis.k141_2935907                          701 36 +     29742 ATAAGC----------------TCCTAAATCTAAC---------T-GGGGTT----TTTT-CT----------------TGGT
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirza_zaza.k141_226143                                     4285 35 +      8497 -taagc----------------tcctaagtctcac---------t-gttttc----tttt--cctt-------------tt--
i Mirza_zaza.k141_226143                                I 13 C 0
s Mus_caroli.LT608236.1                                  70765034 32 +  92629107 ACAAGC----------------TGCTCACTTCCTC---------T-ATGCTT-----G-t-gg----------------ct--
i Mus_caroli.LT608236.1                                 I 30 C 0
s Mus_musculus.chr16                                     75488071 32 +  98207768 ACAAGC----------------TGCTCACTTCCTC---------T-ATGCTT-----G-T-Gg----------------ct--
i Mus_musculus.chr16                                    I 30 C 0
s Mus_pahari.LT608305.1                                  67554312 32 +  89017189 ACAAGC----------------TGCTCACTTCCTC---------T-ATGCTT-----G-T-GG----------------CT--
i Mus_pahari.LT608305.1                                 I 30 C 0
s Mus_spretus.CM004110.1                                 74329250 32 +  97876770 ACAAGC----------------TGCTCACTTCCTC---------T-ATGCTT-----G-t-gg----------------ct--
i Mus_spretus.CM004110.1                                I 30 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              9830 30 +     98495 ---agc----------------tcttaaacctcaa---------t-GCAGTT----TT-T-GG----------------TT--
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 5 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     88725 32 -    117718 atgagc----------------cgctaagcctcac---------c-ag-gtt----ct-t-gc----------------gc--
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 13 C 0
s Nannospalax_galili.KL201303.1                            116857 31 +    362372 acaaac----------------tccttactctcat---------t-a-attt-----g-t-ag----------------at--
i Nannospalax_galili.KL201303.1                         I 22 C 0
s Nasalis_larvatus.k141_153429                               7202 36 +     48152 GTAAGC----------------TCCTAAATCTAAC---------T-GGGGTT----TCTT-CT----------------TAGT
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Nomascus_annamensis.k141_302224                             661 36 +      1516 ataagc----------------ccctaaatctcac---------t-ggggtt----tttt-ct----------------tggt
i Nomascus_annamensis.k141_302224                       I 50 C 0
s Nomascus_concolor.k141_49591                               1782 36 +      2014 ataagc----------------ccctaaaactcac---------t-ggggtt----tttt-ct----------------tggt
i Nomascus_concolor.k141_49591                          C 0 C 0
s Nomascus_gabriellae.k141_642452                             707 36 +      2851 ATAAGC----------------TCCTAAATCTCAC---------T-GGGGTT----TTTT-CT----------------TGGT
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             23622 36 -  18771707 ataagc----------------tcctaaatctcac---------t-ggggtt----tttt-ct----------------tggt
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  1335 36 +      4512 ataagc----------------tcctaaatctcac---------t-ggggtt----tttt-ct----------------tggt
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nycticebus_bengalensis.LG16                            65565826 36 -  95554990 ATGAGG----------------TCATCAATCTTTT---------G-GGGTTG----TTGT-TT----------------TGAT
i Nycticebus_bengalensis.LG16                           I 13 I 4
s Nycticebus_coucang.k141_2051882                            2555 36 +      6470 atgaag----------------tcatcaatctttt---------g-gggttg----ttgt-tt----------------tgat
i Nycticebus_coucang.k141_2051882                       I 13 I 4
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65668164 36 +  89412551 atgagg----------------tcatcaatctttt---------g-gggttg----ttgt-tt----------------tgat
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     I 13 I 4
s Ochotona_princeps.JH802095.1                            4994703 43 -  23139505 CTACGT----------------CTCTAAATCCCAGTAAATCCTGT-GGACCT----TTTC-AT----------------TC--
i Ochotona_princeps.JH802095.1                          I 13 C 0
s Octodon_degus.JH651621.1                                3684262 32 +  10294119 ATGAGC----------------CACTAAATCTCAC---------T-GG-GTT----CT-T-GA----------------TC--
i Octodon_degus.JH651621.1                              I 13 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  123800 33 +    145789 ACAGGC----------------TGCCCACTCCCTTT--------A-ATGCCT-----G-T-GG----------------CT--
i Ondatra_zibethicus.OndZib_scaffold_6821               I 30 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  35571 33 +     62360 acaagc----------------ggctcactcccac--------tt-ttgctt-----g-t-gg----------------ct--
i Onychomys_torridus.OnyTor_scaffold_12578              I 22 C 0
s Oryctolagus_cuniculus.CM000803.1                      141874338 34 + 163896628 aaaagc----------------tcccaaatctcac---------t-ggctct----tttc-gt----------------tc--
i Oryctolagus_cuniculus.CM000803.1                      I 13 C 0
s Otolemur_crassicaudatus.k141_321880                       37717 36 +     38679 atgagg----------------tcttaaatctctc---------g-ggattg----ttgt-tt----------------tgat
i Otolemur_crassicaudatus.k141_321880                   I 13 I 4
s Otolemur_garnettii.GL873528.1                          18007145 36 -  38779656 ATGAGG----------------TCTTAAATCTCTC---------G-GGATTG----TTGT-TT----------------TGAT
i Otolemur_garnettii.GL873528.1                         I 13 I 4
s Pan_paniscus.CM003386.1                               127573344 35 - 205426864 ATAAGC----------------TCCTAAATCTCAC---------T-GGGTTT----TTT--CT----------------TGGt
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120150497 35 - 196562556 aTAAGC----------------TCCTAAATCTCAC---------T-GGGTTT----TTT--CT----------------TGGT
i Pan_troglodytes.CM009241.2                            C 0 I 19
s Papio_anubis.CM001492.2                               188154938 37 - 188283584 ATAAGC----------------GCCTAAATCTAAC---------T-GGGGTT---TTTTT-CT----------------TGgc
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             3256 36 +      5367 ATAAGC----------------GCCTAAATCTAAC---------T-GGGTTT----TTTT-CT----------------TGGC
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47512327 36 +  47705337 ATAAGC----------------TCCTAAATCTAAC---------T-GGGTTT----TTTT-CT----------------TGGC
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 66305 36 -    104429 ATAAGC----------------GCCTAAATCTAAC---------T-GGGGTT----TTTT-CT----------------TGGC
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    4837 36 +     14967 ATAAGC----------------GCCTAAATCTAAC---------T-GGGGTT----TTTT-CT----------------TGGC
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                  698 36 -      7628 ATAAGC----------------GCCTAAATCTAAC---------T-GGGGTT----TTTT-CT----------------TGGC
i Papio_ursinus.k141_1345919                            C 0 C 0
s Perodicticus_ibeanus.k141_117958                           3762 33 -     23713 atgagg----------------tcataaatctctc---------g-gg---g----ttgt-tt----------------tgat
i Perodicticus_ibeanus.k141_117958                      I 13 I 4
s Perodicticus_potto.k141_713187                            20846 33 -     27972 ATGAGG----------------TCATAAATCTCTC---------G-GG---G----TTGT-TT----------------TGAT
i Perodicticus_potto.k141_713187                        I 13 I 2218
s Perognathus_longimembris.PerPac_flattened_line_22291      42338 32 -     45160 ACTAGC----------------CC-TTAATTTCAC---------T-GCATTT----CT-T-CC----------------AG--
i Perognathus_longimembris.PerPac_flattened_line_22291  I 468 C 0
s Peromyscus_maniculatus.KI615518.1                       4948762 33 -   8017169 ACAAGA----------------TGCTCACTCCCACT--------T-CTGCTT-----G-T-GG----------------CT--
i Peromyscus_maniculatus.KI615518.1                     I 22 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    10947 32 -     36578 atgaac----------------tcctaaatctcac---------t-gg-gtt----tt-t-ga----------------tc--
i Petromus_typicus.PetTyp_scaffold_33007                I 22 C 0
s Piliocolobus_badius.k141_1987485                            725 36 -      5908 ATAAGC----------------TCCTAAATCTAAC---------T-GGGgtt----ttat-ct----------------tggt
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       1344 36 -     17985 ATAAGC----------------TCCTAAATCTAAC---------T-GGGgtt----ttat-ct----------------tggt
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                             711 36 +      7694 ATAAGC----------------TCCTAAATCTAAC---------T-GGGGTT----TTAT-CT----------------TGGT
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26739189 36 +  26888534 ATAAGC----------------TCCTAAATCTAAC---------T-GGGGTT----TTAT-CT----------------TGGT
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pithecia_albicans.k141_991845                             42323 36 -     61926 ATAAGA----------------TCCTAAATCTCAC---------T-GAGTTT----ATTT-GT----------------TGTT
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        23752 36 +     78826 ATAAGA----------------TCCTAAATCTCAC---------T-GAGTTT----ATTT-GT----------------TGTG
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              7703 36 -     15800 ATAAGA----------------TCCTAAATCTCAC---------T-GAGTTT----Attt-gt----------------tgtt
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        10901 36 -     16101 ATAAGA----------------TCCTAAATCTCAC---------T-GAGTTT----ATTT-GT----------------TGTT
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          4210 36 +      9673 ATAAGA----------------TCCTAAATCTCAC---------T-GAGTTT----ATTT-GT----------------TGTT
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13473204 36 -  19735023 ATAAGA----------------TCCTAAATCTCAC---------T-GAGTTT----ATTT-GT----------------TGTT
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           12112 36 -     31692 ATAAGA----------------TCCTAAATCTCAC---------T-GAGTTT----ATTT-GT----------------TGTT
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       21546 36 +     44506 ATAAGA----------------TCCTGAATCTCAC---------T-GGGTTT----ATTT-AT----------------TGCT
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        21756 36 +     67491 ATAAGA----------------TCCTGAATCTCAC---------T-GGGTTT----ATTT-AT----------------TGCT
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      11997 36 -     98129 ATAAGA----------------TCCTGAATCTCAC---------T-GGGTTT----ATTT-AT----------------TGCT
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     21602 36 +    147771 ATAAGA----------------TCCTAAATCTCAC---------T-GGGTTT----ATTT-AT----------------TGCT
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        21851 36 -     23762 ATAAGA----------------TCCTGAATCTCAC---------T-GGGTTT----ATTT-AT----------------TGCT
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          2318 36 -     55515 ATAAGA----------------TCCTGAATCTCAC---------T-GGGTTT----ATTT-AT----------------TGCT
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         21671 36 +    152463 ATAAGA----------------TCCTAAATCTCAC---------T-GGGTTT----ATTT-AT----------------TGCT
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      8431 36 +      8943 ATAAGA----------------TCCTAAATCTCCC---------T-GGGTTT----ATTT-AT----------------TGCT
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                         11391 36 +    134592 ATAAGA----------------TCCTGAATCTCAC---------T-GGGTTT----ATTT-AT----------------TGCT
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          21981 36 -     75465 ATAAGA----------------TCCTAAATCTCAC---------T-GGGTTT----ATTT-AT----------------TGCT
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              185886 35 -    373494 ATAAGC----------------TCCTAAGTCTCAC---------T-GGG-TT----TTTT-Ct----------------tggt
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19806534 35 +  19899266 ataagc----------------tcctaagtctcac---------t-ggg-tt----tttt-ct----------------tggt
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               4446 36 -     15069 ATAAGC----------------TCCTAAATCTAAC---------T-GGGgtt----tttt-ct----------------tggt
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              4580 36 +     14865 ATAAGC----------------TCCTAAATCTAAC---------T-GGGGTT----TTTT-CT----------------TGGT
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6847253 43 +  12164890 ATAAGC----------------TCCTAAAtctcac---------t-gttttct---tttt-ttcttttcct--------tt--
i Prolemur_simus.MPIZ01000048.1                         I 13 C 0
s Propithecus_coquerelli.NW_012147997.1                    666464 50 -   2312742 ATAAGC----------------TCCTAAAtctcac---------t-gttttc----tttt-ctcttttccttttttttttt--
i Propithecus_coquerelli.NW_012147997.1                 I 13 C 0
s Propithecus_coronatus.k141_1353159                         2294 48 +     11805 ataagc----------------tcctaaatctcac---------t-gttttc----tttt-ttcttttccttttttt--tt--
i Propithecus_coronatus.k141_1353159                    I 13 C 0
s Propithecus_diadema.k141_577245                           41629 49 +     52369 ataagc----------------tcctaaatctcac---------t-gttttc----tttt-ttcttttcctttttttt-tt--
i Propithecus_diadema.k141_577245                       I 13 C 0
s Propithecus_edwardsi.k141_1317105                         34018 49 -     44753 ataagc----------------tcctaaatctcac---------t-gttttc----tttt-ttcttttcctttttttt-tt--
i Propithecus_edwardsi.k141_1317105                     I 13 C 0
s Propithecus_perrieri.k141_7554                            15939 49 +     27322 ataagc----------------tcctaaatctcac---------t-gttttc----tttt-ttcttttcctttttttt-tt--
i Propithecus_perrieri.k141_7554                        I 13 C 0
s Propithecus_tattersalli.k141_907138                       15578 45 -     53241 ataagc----------------tcctaaatctcac---------t-gttttc----tttt-ttcttttcctttt-----tt--
i Propithecus_tattersalli.k141_907138                   I 13 C 0
s Propithecus_verreauxi.k141_158021                         37849 50 -     48185 ataagc----------------tcctaaatctcac---------t-gttttc----tttt-ctcttttccttttttttttt--
i Propithecus_verreauxi.k141_158021                     I 13 I 4
s Psammomys_obesus.NESX01026517.1                           32070 10 +     77221 ------------------------------------------------GTTT-----G-T-GG----------------CT--
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pygathrix_cinerea.k141_374971                             28569 36 +     56732 ATAAGC----------------TCCTAAATCTAAC---------T-GGGGTT----TTTT-CT----------------TGGT
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6805060 36 +   6970761 ACAAGC----------------TCCTAAATCTAAC---------T-GGGGTT----TTTT-CT----------------TGGT
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             4454 36 +     18040 ACAAGC----------------TCCTAAATCTAAC---------T-GGGGTT----TTTT-CT----------------TGGT
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rattus_norvegicus.chr11                                13914077 32 +  90463843 ACAAGT----------------TGCTCACTTCCTC---------A-AGACTT-----G-T-GG----------------CT--
i Rattus_norvegicus.chr11                               I 30 C 0
s Rhinopithecus_bieti.k119_1391695                            677 36 -      1866 ATAAGC----------------TCCTAAATCTAAC---------T-GGGgtt----tttt-ct----------------tggt
i Rhinopithecus_bieti.k119_1391695                      C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206376334 36 - 206558726 aTAAGC----------------TCCTAAATCTAAT---------T-GGGGTT----TTTT-CT----------------TGGT
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44855234 36 -  45163003 ATAAGC----------------TCCTAAATCTAAC---------T-GGGgtt----tttt-ct----------------tggt
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15671421 36 -  43202129 ATAAGA----------------TCCTAAATCTCAC---------T-GGGTTT----ATTT-GT----------------tgtt
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        3338 36 +     34089 ATAAGA----------------TCCTAAATCTCAC---------T-GGGTTT----ATTT-GT----------------TGTT
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              3279 36 -     60842 ATAAGA----------------TCCTAAATCTCAC---------T-GGGTTT----ATTT-GT----------------TGTT
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              3374 36 +     67014 ATAAGA----------------TCCTAAATCTCAC---------T-GGGTTT----ATTT-GT----------------TGTT
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              3352 36 +     60816 ATAAGA----------------TCCTAAATCTCAC---------T-GGGTTT----ATTT-GT----------------TGTT
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 3289 36 -     76454 ATAAGA----------------TCCTAAATCTCAC---------T-GGGTTT----ATTT-GT----------------TGTT
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17339992 52 -  30362882 ATAAGATCCTATCCCTATAAGATCCTAAATCTCAC---------T-GGGTTT----Attt-gt----------------catt
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         19367 36 -     62485 ATAAGA----------------TCCTAAATCTCAC---------T-GGGTTT----Attt-gt----------------catt
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Semnopithecus_entellus.k141_1572367                        2061 36 +     15331 ataagc----------------tcctaaatctaac---------t-gggttt----tttt-ct----------------tggt
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       7458 36 +     20762 ataagc----------------tcctaaatctaac---------t-gggttt----tttt-ct----------------tggt
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         117456 36 +    130994 ataagc----------------tcctaaatctaac---------t-gggttt----tttt-ct----------------tggt
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           36247 36 +     46263 ataagc----------------tcctaaatctaac---------t-gggttt----tttt-ct----------------tggt
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     29361 36 +     42640 ataagc----------------tcctaaatctaac---------t-gggttt----tttt-ct----------------tggt
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        12410 36 +     30600 ataagc----------------tcctaaatctaac---------t-gggttt----tttt-ct----------------tggt
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   98341 33 -    120886 ACAAAC----------------TGCTCACGCTCACT--------T-ATGTTT-----G-T-GG----------------CT--
i Sigmodon_hispidus.SigHis_scaffold_11332               I 8 C 0
s Spermophilus_dauricus.KZ294190.1                        2238628 23 +   2842873 ATGAGC----------------TTTGAAATctcat---------t-g---tt-------------------------------
i Spermophilus_dauricus.KZ294190.1                      I 13 C 0
s Symphalangus_syndactylus.tarseq_24                        13614 36 -  13920577 ataagc----------------tcctaaatctcac---------t-ggggtt----tttt-ct----------------ttgc
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tarsius_lariang.k141_609102                               25192 13 +     42269 -------------------------------------------------tat----tgct-tt----------------tgtt
i Tarsius_lariang.k141_609102                           I 7 C 0
s Tarsius_wallacei.k141_48636                               58508 13 +     65473 -------------------------------------------------tat----tgct-tt----------------tgtt
i Tarsius_wallacei.k141_48636                           I 7 C 0
s Theropithecus_gelada.CM009951.1                       194006466 36 - 194193292 ATAAGC----------------TCCTAAATCTAAC---------T-GGGGTT----TTTT-CT----------------TGgc
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             38007 32 -     47444 atgagc----------------tgctaaatctcac---------t-gg-gtt----tt-t-ga----------------tc--
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         I 11 C 0
s Trachypithecus_auratus.k141_738098                        25568 36 +     38948 ataagc----------------tcctaaatctaac---------t-gggttt----tttt-ct----------------tggt
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   19295 36 -     32910 ATAAGC----------------TCCTAAATCTAAC---------T-GGgttt----tttt-ct----------------tggt
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                       682 36 -     12939 ataagc----------------tcctaaatctaac---------t-gggttt----tttt-ct----------------tggt
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                        622 36 -     14244 ataagc----------------tcctaaatctaac---------t-gggttt----tttt-ct----------------tggt
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           42015 36 -     54611 ataagc----------------tcctaaatctaac---------t-gggttt----tttt-ct----------------tggt
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_878600                         845 36 +      1165 ataagc----------------tcctaaatctaac---------t-gggttt----tttt-ct----------------tggt
i Trachypithecus_germaini.k141_878600                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     1993 36 -     15592 ataagc----------------tcctaaatctaac---------t-gggttt----tttt-ct----------------tggt
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                           650 36 +     14371 ataagc----------------ccctaaatctaac---------t-gggttt----tttt-ct----------------tggt
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  50407 36 +     51589 ataagc----------------tcctaaatctaac---------t-gggttt----tttt-ct----------------tggt
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       13583 36 +     14732 ataagc----------------tcctaaatctacc---------t-gggttt----tttt-ct----------------tggt
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       4060 36 -     28054 ataagc----------------tcctaaatctaac---------t-gggttt----tttt-ct----------------tggt
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44658855 36 -  44834318 ataagc----------------tcctaaatctaac---------t-gggttt----tttt-ct----------------tggt
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       1158 36 +     13828 ataagc----------------tcctaaatctaac---------t-gggttt----tttt-ct----------------tggt
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tupaia_chinensis.KB320831.1                             2791526 27 -   3938065 ATAAGT----------------ACTAAAAAAATAG---------T-GAGATT-----T-------------------------
i Tupaia_chinensis.KB320831.1                           I 13 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    3779 31 +     13056 ataagc----------------tcctaaatctcac---------t-gttatttttt-t-------------------------
i Tupaia_tana.TupTan_flattened_line_68454               I 13 C 0
s Varecia_rubra.k141_432109                                  3960 43 -     20643 ataagc----------------tcctaaatctcac---------t-gttttct---tttt-ttctgttcct--------tt--
i Varecia_rubra.k141_432109                             I 13 C 0
s Varecia_variegata.k141_775891                             23502 42 -     33872 ataagc----------------tcctaaatctcac---------t-gttttct---tttt-ttctgttcc---------tt--
i Varecia_variegata.k141_775891                         I 13 C 0
s Xerus_inauris.XerIna_scaffold_7898                       125728 23 -    134049 AAGAGC----------------TCTAAAATCTCAT---------T-G---TT-------------------------------
i Xerus_inauris.XerIna_scaffold_7898                    I 13 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     13944 32 -     20485 atgagc----------------tcctgaattcatc---------a-agtttc-----t-g-gg----------------tc--
i Zapus_hudsonius.ZapHud_scaffold_64392                 I 22 C 0
e Eptesicus_fuscus.JH977687.1                             4702143 415 +   6522550 I
e Macroglossus_sobrinus.MacSob_scaffold_879                699974 431 +    802869 I
e Sorex_araneus.JH798170.1                               17748590 843 -  27805282 I
e Erinaceus_europaeus.JH835290.1                         11530833 462 +  16010500 I
e Chaetophractus_vellerosus.ChaVel_scaffold_1070855          1230  0 -      1715 I
e Suricata_suricatta.SurSur_flattened_line_20339            25319 430 +     62062 I
e Ziphius_cavirostris.ZipCav_flattened_line_127025           5301 442 -      8775 I
e Zalophus_californianus.ZalCal_flattened_line_4097        212018 448 -    227762 I
e Vulpes_lagopus.VulLag_flattened_line_2045                135489 449 -    281493 I
e Vicugna_pacos.KN269600.1                                1523037 433 -   2331223 I
e Ursus_maritimus.KK498671.1                              6512543 460 +  28682327 I
e Uropsilus_gracilis.UroGra_scaffold_4143_0                 24925  0 -     25548 I
e Tursiops_truncatus.MRVK01000923.1                      69311805 441 -  96451834 I
e Trichechus_manatus.JH594618.1                          16079679 1700 +  31416278 I
e Tragulus_javanicus.TraJav_scaffold_14717                   3584 419 +     90398 I
e Tonatia_saurophila.TonSau_scaffold_3334                  134241 421 -    259118 I
e Tolypeutes_matacus.TolMat_scaffold_269431                  1990 2406 +      6782 I
e Tapirus_terrestris.TapTer_scaffold_14939                  55756 434 +     99546 I
e Tapirus_indicus.TapInd_scaffold_176                      805095 435 +   1148477 I
e Tamandua_tetradactyla.TamTet_scaffold_26877               13106 433 +     45698 I
e Tadarida_brasiliensis.TadBra_scaffold_145589               4174 407 -      6213 I
e Sus_scrofa.CM000824.4                                 189270228 447 + 218635234 I
e Spilogale_gracilis.SpiGra_flattened_line_905             232751 445 -    276980 I
e Solenodon_paradoxus.SolPar_flattened_line_1012            16376 416 +    739146 I
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   29737 434 -    114521 I
e Saiga_tatarica.SaiTat_scaffold_82192                       5983 428 +     12214 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                17647 435 +    109198 I
e Rhinolophus_sinicus.LVEH01000179.1                      1786172 430 +   2252614 I
e Rangifer_tarandus.RanTarSib_scaffold_24239                14178 431 +     68503 I
e Puma_concolor.QAVW01000427.1                          131532079 431 - 161321710 I
e Pteropus_vampyrus.KN525959.1                             602305 437 -   3946241 I
e Pteropus_alecto.KB031157.1                             13244354 438 -  17261082 I
e Pteronura_brasiliensis.PteBra_flattened_line_1343        243991 454 -    344369 I
e Pteronotus_parnellii.KE867983.1                            2230 422 -     27784 I
e Procavia_capensis.ProCapCap_scaffold_15315                74302 1939 +     78963 I
e Platanista_gangetica.PlaMin_flattened_line_72990           3771 443 +     21690 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            95224 410 +    112873 I
e Phocoena_phocoena.PhoPho_flattened_line_11948            119703 443 -    122454 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113416 447 -    135482 I
e Pantholops_hodgsonii.KE114631.1                         1064538 417 -   1292953 I
e Panthera_tigris.KE721879.1                              5025497 431 -   6340057 I
e Panthera_pardus.KV860323.1                              3635849 432 +  18214204 I
e Panthera_onca.PanOnc_flattened_line_1615                  32116 431 +    295523 I
e Ovis_canadensis.OviCan_scaffold_6251                      76891 417 +    140051 I
e Ovis_aries.CM001582.2                                 134075677 417 - 275406953 I
e Otocyon_megalotis.JAEUCK010005121.1                      305421 444 -    505867 I
e Orycteropus_afer.OryAfe_flattened_line_13509              41471 1764 -     66828 I
e Orcinus_orca.KB316965.1                                 7223086 443 -   7562323 I
e Okapia_johnstoni.LVCL01S0017931.1                         35255 573 +     78940 I
e Odocoileus_virginianus.KZ101650.1                       1078100 432 +   1425656 I
e Odobenus_rosmarus.KB229369.1                             677288 443 -   3126709 I
e Nyctereutes_procyonoides.CAJHUB010000786.1                28082 449 +   3668941 I
e Noctilio_leporinus.NocLep_scaffold_12062                  47676 415 +     94413 I
e Neophocaena_asiaeorientalis.KZ688543.1                  3949402 443 -   4490290 I
e Neomonachus_schauinslandi.NINY01007774.1                4482632 454 -  14209539 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3432 432 -      8794 I
e Myotis_myotis.MyoMyo_scaffold_6123                         8554 416 +     66751 I
e Myotis_lucifugus.GL429887.1                             3463359 417 -   3747815 I
e Myotis_davidii.KB114863.1                               5017463 416 +   6462685 I
e Myotis_brandtii.KE161952.1                               965772 418 +   8389877 I
e Mustela_putorius.JH417978.1                             4421898 453 -  28371801 I
e Murina_feae.MurFea_scaffold_2254                          17451 414 -    100666 I
e Mungos_mungo.MunMun_flattened_line_8729                  142653 430 -    168139 I
e Moschus_moschiferus.MosMos_scaffold_146101                 2972 432 -      4346 I
e Mormoops_blainvillei.MorMeg_scaffold_2952                159560 424 +    265003 I
e Monodon_monoceros.MonMon_M_scaffold_5598                 144790 442 +    154973 I
e Mirounga_angustirostris.MirAng_flattened_line_8852         9033 661 -    104932 I
e Miniopterus_schreibersii.MinSch_scaffold_24116            32480 421 +     45743 I
e Miniopterus_natalensis.LDJU01000022.1                   8207809 420 +  10048721 I
e Micronycteris_hirsuta.MicHir_scaffold_37978               21050 428 -     32043 I
e Microgale_talazaci.MicTal_scaffold_34660                  29351 1133 -     48017 I
e Mellivora_capensis.MelCap_flattened_line_146202             327 452 -      1999 I
e Megaderma_lyra.MegLyr_scaffold_3562                       62628 576 -    234502 I
e Manis_pentadactyla.KN017078.1                             34538 441 +     58827 I
e Manis_javanica.JSZB01003966.1                            144466 438 +    252755 I
e Lycaon_pictus.CM007556.1                               11085089 449 +  39895028 I
e Loxodonta_africana.GL010040.1                          20589215 1702 -  62548349 I
e Lipotes_vexillifer.KE558548.1                            134353 444 +   3060487 I
e Leptonychotes_weddellii.KB714749.1                      3083728 458 -   3498232 I
e Lasiurus_borealis.LasBor_scaffold_5102                   111937 417 -    115756 I
e Kogia_breviceps.KogBre_flattened_line_35920               22021 443 +     37189 I
e Inia_geoffrensis.IniGeo_flattened_line_66725               7195 437 +     17520 I
e Hyaena_hyaena.HyaHya_flattened_line_20729                 14013 474 -     67322 I
e Hipposideros_galeritus.HipGal_scaffold_104691              5946 409 -      9143 I
e Hipposideros_armiger.JXIK01001085.1                      276788 408 -    477199 I
e Hippopotamus_amphibius.HipAmp_scaffold_1308              145449 430 +    277961 I
e Heterohyrax_brucei.HetBruBak_scaffold_25354               54438 1939 +     73687 I
e Hemitragus_hylocrius.HemHyl_scaffold_16669                25884 416 -     91191 I
e Helogale_parvula.HelPar_flattened_line_22962              14960 432 +     53719 I
e Giraffa_tippelskirchi.LVKQ01S012154.1                    179385 717 -    189561 I
e Felis_nigripes.FelNig_flattened_line_8080                 18925 427 +     52776 I
e Felis_catus_fca126.CM031420.1                         129277790 427 - 158578461 I
e Eubalaena_japonica.EubJap_flattened_line_7756             59838 466 +     89355 I
e Eschrichtius_robustus.EscRob_flattened_line_685          313408 442 +    330699 I
e Equus_przewalskii.ATBW01073585.1                          11036 704 +     92910 I
e Equus_caballus.CM000402.2                              13349546 704 +  41866177 I
e Equus_asinus.JREZ01000062.1                             5851044 703 -   7175178 I
e Enhydra_lutris.KZ291749.1                              85869516 453 +  99434291 I
e Elephantulus_edwardii.JH947210.1                        7804622 10712 +  15467074 I
e Elaphurus_davidianus.JRFZ01086400.1                     1489870 432 +   1727528 I
e Eidolon_helvum.KE772537.1                                 10556 435 +     24177 I
e Echinops_telfairi.JH980316.1                           22994071  0 -  44670279 C
e Diceros_bicornis.DicBicMic_scaffold_9545                    953 1024 +    151128 I
e Dicerorhinus_sumatrensis.PEKH010003161.1                 320309 1016 +    993696 I
e Desmodus_rotundus.KZ672188.1                           18697183 419 -  18957592 I
e Delphinapterus_leucas.KZ290064.1                       80035206 438 -  96802777 I
e Dasypus_novemcinctus.JH568778.1                          180040 2424 -   6883506 I
e Cryptoprocta_ferox.CryFer_flattened_line_19014            49751 433 -     70449 I
e Crocidura_indochinensis.CroInd_scaffold_38409             18067 408 -     19186 I
e Craseonycteris_thonglongyai.CraTho_scaffold_22679         37588 826 -     40477 I
e Condylura_cristata.JH655880.1                          60611131 297 +  78930452 I
e Choloepus_hoffmanni.KN194586.1                           760141 439 +    964067 I
e Choloepus_didactylus.ChoDid_scaffold_36182                14830 439 -     21363 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_160623         1406 1024 -      9338 I
e Catagonus_wagneri.CatWag_scaffold_1305                   157166 412 -    276539 I
e Carollia_perspicillata.CarPer_scaffold_4436               57873 420 +     67245 I
e Capra_hircus.CM004562.1                               135704839 417 - 157403528 I
e Capra_aegagrus.CM003214.1                              21323612 417 + 157394656 I
e Canis_lupus_orion.HG994411.1                           16452657 449 -  44759192 I
e Canis_lupus_familiaris.chr31                           11085633 449 +  39895921 I
e Canis_lupus_dingo.QKWQ01001993.1                       11263104 449 -  35597290 I
e Canis_lupus_VD.CanFam_VD_scaffold_16982                   11461 449 +     87036 I
e CanFam4.chr31                                          11516443 449 +  39901454 I
e Camelus_ferus.KB016973.1                                2971365 436 +   6889770 I
e Camelus_dromedarius.KN271192.1                           395631 437 -  15254737 I
e Camelus_bactrianus.KN276303.1                           3217927 436 -   8989139 I
e Bubalus_bubalis.KI419065.1                              1229342 431 -   1914593 I
e Bos_taurus.CM000177.6                                 136293586 432 - 158972876 I
e Bos_mutus.JH883513.1                                     570227 432 -    998990 I
e Bos_indicus.CM003021.1                                138137853 432 - 161108492 I
e Bison_bison.KN264915.1                                  6557614 432 +   6870073 I
e Beatragus_hunteri.BeaHun_scaffold_21644                   41603 412 -     72089 I
e Balaenoptera_bonaerensis.DF502048.1                        3753 444 -     13118 I
e Balaenoptera_acutorostrata.KI537095.1                  26378522 443 +  51448160 I
e Artibeus_jamaicensis.ArtJam_scaffold_41619                 7075 421 -     29036 I
e Antilocapra_americana.AntAmePen_scaffold_42841            29107 427 +     33004 I
e Anoura_caudifer.AnoCau_scaffold_422                      388679 416 -    631301 I
e Ammotragus_lervia.NIVO01013474.1                        3518508 445 +   4113121 I
e Ailurus_fulgens.LNAC01000003.1                          7091784 657 -  16596857 I
e Ailuropoda_melanoleuca.LNAT01000321.1                  10655057 459 +  23371972 I
e Acinonyx_jubatus.LLWD01000356.1                         2031739 430 +   3721120 I
e Hylobates_pileatus_b.ContigUN                                 14622428 998 -  25970782 I
e Ellobius_lutescens.LOEQ01003611.1                        238324 20 -    369425 I
e Cricetomys_gambianus.CriGam_scaffold_949                 277018 21 -    399297 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               10637  9 +    209709 GGTGTT-T----TG
s Acomys_cahirinus.AcoCah_scaffold_1625                    111075  1 -    189883 --C-----------
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   11660  3 -     22067 --att---------
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_3103728                   1244  9 +      1665 GATGTT-T----TG
i Allenopithecus_nigroviridis.k141_3103728              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                          720  9 -     29318 gatgtt-t----tg
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_21674                            937  9 -      1421 gatgtt-t----tg
i Allochrocebus_preussi.k141_21674                      C 0 C 0
s Allochrocebus_solatus.k141_371672                           614  9 -     80423 gatgtt-t----tg
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             8903  8 -     18050 GGTGTT-T----G-
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                 10016  8 -     11521 GGTGTT-T----G-
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              9580  8 -     21359 GGTGTT-T----G-
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_298055                                  871  9 +      1823 AGTGTT-T----GG
i Alouatta_juara.k141_298055                            C 0 C 0
s Alouatta_macconnelli.k141_1331706                          8871  9 -     10438 agtgtt-t----gg
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            5527  9 +      7047 AGTGTT-T----GG
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             8812  8 +     10410 GGTGTT-T----G-
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            2617  9 -      4927 agtgtt-t----gg
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             5546  9 +      6429 AGTGTT-T----GG
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Aotus_azarae.k141_3170768                                 61268  9 +     78111 GGTGTT-T----GG
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            4209  9 +     22701 GGTGTT-T----GG
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5748166  9 +   9889416 ggtgtt-t----gg
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             4751  9 -    104377 GGTGTT-T----GG
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               4757  9 +     23246 GGTGTT-T----GG
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     2573  3 +      5067 --ttC---------
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      16572  9 +     17483 GGTTTT-T----GT
i Arctocebus_calabarensis.k141_1161114                  I 4 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9538003  9 +  39197703 GGTGTT-T----GG
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             59287  9 +     85812 GGTGTT-T----GG
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                10286  9 +     89302 GGTGTT-T----GG
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             14791  9 -     58268 ggtgtt-t----gg
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             62782  9 +    119057 GGTGTT-T----GG
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               4751  9 -     25888 ggtgtt-t----gg
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 5414  8 -     16375 ---t---tttttgg
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              1733  9 +      2719 ---tt--tttttgg
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Cacajao_ayresi.k141_724503                               112645  9 -    171031 ggtgtt-t----ga
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 11671  9 +    125063 GGTGTT-T----GA
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                13719  9 -    216513 ggtgtt-t----ga
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        6259  9 -    134917 ggtgtt-t----ga
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Capromys_pilorides.CapPil_scaffold_979108                   693  3 -      1248 --aat---------
i Capromys_pilorides.CapPil_scaffold_979108             C 0 C 0
s Carlito_syrichta.NW_007248099.1                          307722  9 +    345090 tttgtt-t----gg
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   29420  1 +     33760 --T-----------
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15785340  3 -  24422027 --att---------
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15797274  3 -  24440124 --att---------
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       175465  3 +    436027 --att---------
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18889501  9 -  29618158 ggtgtt-t----gt
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 7045  9 -     26817 ggtgtt-t----gt
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                11285  9 +     25043 GGTGTT-T----GT
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         6755  9 +     21754 tttgtt-t----gg
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6553936  9 +   6739814 ggtgtt-t----tg
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      25413  9 +     60454 GGTGTT-T----TG
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                           618  9 -     21101 GGTGTT-T----TG
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         57928  9 -    107033 GGTGTT-T----TG
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                         829  7 -     17608 gatgtt-t------
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          28327  7 +     30494 GATGTT-T------
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          57170  7 -     59240 gatgtt-t------
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                           871  7 +     16677 GATGTT-T------
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           23029  7 +     35983 GATGTT-T------
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11989560  7 +  12117833 GATGTT-T------
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46476315  7 +  46592721 GATGTT-T------
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      39866  7 -     45581 gatgtt-t------
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                        875  7 +     35577 GATGTT-T------
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                         648  7 -     25661 gatgtt-t------
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                         626  7 -     17744 gatgtt-t------
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        20235  7 +     37128 GATGTT-T------
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           57711  6 -     68416 ---ttt-t----gg
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            6754  6 +     13308 ---ttt-t----gg
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             4295  9 -     18223 ggtgtt-t----ga
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             21318  9 +     25473 GGTGTT-T----GA
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           40353  9 +     57117 GGTGTT-T----GA
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          45032  9 +     54541 GGTGTT-T----GA
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15960484  3 +  43084221 --att---------
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         69854  9 +    196370 GGTGTT-T----GA
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          14034  9 +     40510 GGTGTT-T----GA
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15137780  9 -  15256731 gatgtt-t----tg
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      32827  9 -     53260 gatgtt-t----tg
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101143390  9 + 101219884 gatgtt-t----tg
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10885155  9 +  10971483 Gatgtc-t----tg
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147663319  9 + 156195979 gatgtc-t----tg
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            15303  9 +     23629 gatgtc-t----tg
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 277039  2 -    399297 ---TT---------
i Cricetomys_gambianus.CriGam_scaffold_949              I 21 C 0
s Cricetulus_griseus.LT883672.1                          53027727  1 +  72327488 --c-----------
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  206902  2 -    956709 --at----------
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 29462  3 -     67205 --att---------
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                16494  3 +     26546 --att---------
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             57584  3 -    236241 --att---------
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16843563  6 +  31942871 ---ttt-t----gg
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Dipodomys_ordii.KN672545.1                              3654931  1 +   4240102 --t-----------
i Dipodomys_ordii.KN672545.1                            C 0 I 1
s Dipodomys_stephensi.DipSte_scaffold_44365                 26567  1 +     28912 --T-----------
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 I 1
s Dolichotis_patagonum.DolPat_scaffold_14102                34833  3 -     73477 --agt---------
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           5395  1 -      7838 --c-----------
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Erythrocebus_patas.Contig8                             48769960  9 -  48907691 gatgtt-t----tg
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eulemur_albifrons.k141_715837                              3757  7 +     13586 ---ttttt----gg
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               3691  6 -      6809 ---ttt-t----gg
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            10167  6 +     36558 ---ttt-t----gg
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             6483  6 +     60246 ---ttt-t----gg
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 9965  7 +    109717 ---ttt-t---ggg
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               14345  6 +     16540 ---ttt-t----gg
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                14617  7 +     27497 ---ttttt----gg
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           17077  6 +     26808 ---ttt-t----gg
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                31810  6 +     46535 ---ttt-t----gg
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              14532  6 -     29447 ---ttt-t----gg
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Fukomys_damarensis.KN123630.1                          13891434  3 -  19261668 --att---------
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     209661  9 -    847004 ggtttt-t----ag
i Galago_moholi.ctg555                                  I 4 C 0
s Galago_senegalensis.k141_964197                           12040  9 -     43889 ggtttt-t----ag
i Galago_senegalensis.k141_964197                       I 4 C 0
s Galagoides_demidoff.k141_1769638                           9109  9 +     27357 ggtttt-t----ag
i Galagoides_demidoff.k141_1769638                      I 4 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               155004  7 +    324696 --tttt-t----tg
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           11385  3 -     18683 --ttt---------
i Glis_glis.GliGli_scaffold_79770                       C 0 I 3
s Gorilla_beringei.k141_111300                               4036  9 -     14630 ggtgtt-t----tg
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119651135  9 - 195582420 ggtgtt-t----tg
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   76132  3 +    118900 --ttt---------
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 I 27
s Hapalemur_alaotrensis.k141_1280836                          580  6 +     10286 ---ttt-t----gg
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_1254239                            8730  6 +      9690 ---ttt-t----gg
i Hapalemur_gilberti.k141_1254239                       C 0 C 0
s Hapalemur_griseus.k141_1387522                             4359  6 +     56096 ---ttg-t----gg
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        27635  6 -     42470 ---ttg-t----gg
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        44233  6 -     54384 ---ttt-t----gg
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2549830  3 +  31725842 --att---------
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Hoolock_leuconedys.ctg2405                                   14068  9 -     15084 ggTGTT-T----TG
i Hoolock_leuconedys.ctg2405                               C 0 n 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           17735  3 -    119109 --act---------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_866183                               694  9 -      1027 TTTGTT-T----TG
i Hylobates_abbotti.k141_866183                         I 497 I 14
s Hylobates_agilis.k141_624065                                721  9 +      2112 TTTGTT-T----TA
i Hylobates_agilis.k141_624065                          C 0 I 1
s Hylobates_klossii.k141_466549                             10297  9 +     11537 TTTGTT-T----TG
i Hylobates_klossii.k141_466549                         C 0 I 1
s Hylobates_muelleri.k141_1002428                             658  9 +      1029 TTTGTT-T----TG
i Hylobates_muelleri.k141_1002428                       n 10 I 14
s Hylobates_pileatus_a.tarseq_592                             33283  9 -     60944 tttgtt-t----tg
i Hylobates_pileatus_a.tarseq_592                         C 0 I 1
s Hystrix_cristata.HysCri_scaffold_50788                     4884  3 +     22540 --aac---------
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Indri_indri.k141_4418183                                    178  6 -      1457 ---ttt-t----cg
i Indri_indri.k141_4418183                              C 0 C 0
s Jaculus_jaculus.JH725517.1                              8564403  3 +  11848649 --ATT---------
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Lagothrix_lagothricha.k141_12968                          48872  9 -    147782 ggtgtt-t----gt
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lemur_catta.scaffold_1                                258405915  6 - 285822530 ---ttt-t----gg
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        22678  6 +     39228 ---ttt-t----gg
i Lepilemur_ankaranensis.k141_884009                    I 13 C 0
s Lepilemur_dorsalis.k141_134267                            52053  6 +     63517 ---ttt-t----gg
i Lepilemur_dorsalis.k141_134267                        I 13 C 0
s Lepilemur_ruficaudatus.k141_617879                        77303  6 +    116806 ---ttt-t----gg
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     30317  6 -     33031 ---ttt-t----gg
i Lepilemur_septentrionalis.k141_578524                 I 13 C 0
s Lepus_americanus.LepAme_scaffold_62849                    11714  3 +     22452 --ttc---------
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lophocebus_aterrimus.ctg55                             19247025  9 +  19376315 GATGTT-T----TG
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            9425  9 +     84689 ggtttt-t----gg
i Loris_lydekkerianus.k141_550999                       I 4 C 0
s Loris_tardigradus.ctg97                                 3777174  9 +   6799190 ggtttt-t----gg
i Loris_tardigradus.ctg97                               I 4 C 0
s Macaca_arctoides.k141_2201161                             18704  7 +     74745 GATGTT-T------
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12705221  9 +  12821369 GATGTT-T----TG
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                 866  9 -      3136 gatgtt-t----tg
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           45617  9 +     63263 GATGTT-T----TG
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                  383  9 -      2568 gatgtt-t----tg
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                  891  9 -      7381 gatgtt-t----tg
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  44128  9 -     79256 gatgtt-t----tg
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196034298  9 + 196197964 gatgtt-t----tg
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11444403  9 +  11645122 gatgtt-t----tg
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   3075  9 -     46448 gatgtt-t----tg
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                 747  9 -     13212 gatgtt-t----tg
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 14489  9 -     55006 gatgtt-t----tg
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43839526  9 +  43892939 GATGTT-T----TG
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               15776  9 -     24607 gatgtt-t----tg
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               3080  9 -     27140 gatgtt-t----tg
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43436184  9 -  43563597 GGTGTT-T----TG
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4449010  9 -   4543643 ggtgtt-t----tg
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Microcebus_murinus.CM007691.1                          16508925  2 +  47401472 ------------gg
i Microcebus_murinus.CM007691.1                         I 3 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               10530  1 +     15977 --C-----------
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1045465  1 -  26018355 --C-----------
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22818585  1 -  98408828 --c-----------
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miopithecus_ogouensis.k141_2935907                          737  9 +     29742 GATGTT-T----TG
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirza_zaza.k141_226143                                     4320  6 +      8497 ---ttt-t----gg
i Mirza_zaza.k141_226143                                C 0 C 0
s Mus_caroli.LT608236.1                                  70765066  1 +  92629107 --c-----------
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75488103  1 +  98207768 --c-----------
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67554344  1 +  89017189 --C-----------
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74329282  1 +  97876770 --c-----------
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              9860  3 +     98495 --TTT---------
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 I 3
s Myocastor_coypus.MyoCoy_scaffold_3653                     88757  3 -    117718 --aat---------
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Nasalis_larvatus.k141_153429                               7238  9 +     48152 GATGTC-T----TG
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Nomascus_annamensis.k141_302224                             697  9 +      1516 ggTGTT-T----TG
i Nomascus_annamensis.k141_302224                       C 0 C 0
s Nomascus_concolor.k141_49591                               1818  9 +      2014 ggTGTT-T----TG
i Nomascus_concolor.k141_49591                          C 0 C 0
s Nomascus_gabriellae.k141_642452                             743  9 +      2851 GGTGTT-T----cg
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             23658  9 -  18771707 ggtgtt-t----tg
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  1371  9 +      4512 ggTGTT-T----TG
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nycticebus_bengalensis.LG16                            65565866  9 -  95554990 GGTTTT-T----GG
i Nycticebus_bengalensis.LG16                           I 4 C 0
s Nycticebus_coucang.k141_2051882                            2595  9 +      6470 ggtttt-t----gg
i Nycticebus_coucang.k141_2051882                       I 4 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65668204  9 +  89412551 ggtttt-t----gg
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     I 4 C 0
s Ochotona_princeps.JH802095.1                            4994746  3 -  23139505 --TCG---------
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3684294  3 +  10294119 --ATT---------
i Octodon_degus.JH651621.1                              C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  123833  1 +    145789 --C-----------
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  35604  1 +     62360 --c-----------
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141874372  3 + 163896628 --ttc---------
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       37757  9 +     38679 ggtttt-t----ag
i Otolemur_crassicaudatus.k141_321880                   I 4 C 0
s Otolemur_garnettii.GL873528.1                          18007185  9 -  38779656 GGTTTT-T----Ag
i Otolemur_garnettii.GL873528.1                         I 4 C 0
s Pan_paniscus.CM003386.1                               127573379  9 - 205426864 ggcgtt-t----tg
i Pan_paniscus.CM003386.1                               C 0 I 3
s Pan_troglodytes.KZ622857.1                               326362  9 +    772158 ggtgtt-t----tg
i Pan_troglodytes.KZ622857.1                            I 234 C 0
s Papio_anubis.CM001492.2                               188154975  9 - 188283584 gatgtt-t----tg
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             3292  9 +      5367 GATGTT-T----TG
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47512363  9 +  47705337 GATGTT-T----TG
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 66341  9 -    104429 GATGTT-T----TG
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    4873  9 +     14967 GATGTT-T----TG
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                  734  9 -      7628 GATGTT-T----TG
i Papio_ursinus.k141_1345919                            C 0 C 0
s Perodicticus_ibeanus.k141_117958                           3799  9 -     23713 ggtttt-t----gg
i Perodicticus_ibeanus.k141_117958                      I 4 C 0
s Perodicticus_potto.k141_713187                            23097  9 -     27972 ggtttt-t----gg
i Perodicticus_potto.k141_713187                        I 2218 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      42370  1 -     45160 --T-----------
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 I 1
s Peromyscus_maniculatus.KI615518.1                       4948795  1 -   8017169 --C-----------
i Peromyscus_maniculatus.KI615518.1                     C 0 I 1
s Petromus_typicus.PetTyp_scaffold_33007                    10979  3 -     36578 --att---------
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Piliocolobus_badius.k141_1987485                            761  9 -      5908 gatgtc-t----tg
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       1380  9 -     17985 gatgtc-t----tg
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                             747  9 +      7694 GATGTC-T----TG
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26739225  9 +  26888534 Gatgtc-t----tg
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pithecia_albicans.k141_991845                             42359  9 -     61926 GGTGTT-T----GA
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        23788  9 +     78826 GGTGTT-T----GA
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              7739  9 -     15800 ggtgtt-t----ga
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        10937  9 -     16101 GGTGTT-T----GA
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          4246  9 +      9673 GGTGTT-T----GA
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13473240  9 -  19735023 GGTGTT-T----GA
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           12148  9 -     31692 GGTGTT-T----GA
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       21582  9 +     44506 GGTGTT-T----GA
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        21792  9 +     67491 GGTGTT-T----GA
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      12033  9 -     98129 GGTGTT-T----GA
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     21638  9 +    147771 GGTGTT-T----GA
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        21887  9 -     23762 GGTGtt-t----ga
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          2354  9 -     55515 GGTGTT-T----GA
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         21707  9 +    152463 GGTGTT-T----GA
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      8467  9 +      8943 GGTGTT-T----GA
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                         11427  9 +    134592 GGTGTT-T----GA
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          22017  9 -     75465 GGTGTT-T----GA
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              185921  2 -    373494 gg------------
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19806569  2 +  19899266 gg------------
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               4482  9 -     15069 gatgtc-t----tg
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              4616  9 +     14865 GATGTC-T----TG
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6847296  6 +  12164890 ---ttt-t----gg
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    666514 10 -   2312742 ---ttt-tttttgg
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         2342 10 +     11805 ---ttt-tttttgg
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           41678  9 +     52369 ---tt--ttttcgg
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         34067 10 -     44753 ---ttt-tttttgg
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            15988  9 +     27322 ---tt--tttttgg
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       15623 10 -     53241 ---ttt-tatttgg
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         37903  2 -     48185 ------------gg
i Propithecus_verreauxi.k141_158021                     I 4 C 0
s Psammomys_obesus.NESX01026517.1                           32080  1 +     77221 --C-----------
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pygathrix_cinerea.k141_374971                             28605  9 +     56732 GATGTC-T----TG
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6805096  9 +   6970761 GATGTC-T----TG
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             4490  9 +     18040 GATGTC-T----TG
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rattus_norvegicus.chr11                                13914109  1 +  90463843 --C-----------
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinopithecus_bieti.k119_1391695                            713  9 -      1866 gatgtc-t----tg
i Rhinopithecus_bieti.k119_1391695                      C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206376370  9 - 206558726 Gatgtc-t----tg
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44855270  9 -  45163003 gatgtc-t----tg
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15671457  8 -  43202129 ggtgtt-t----g-
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        3374  8 +     34089 GGTGTT-T----G-
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              3315  8 -     60842 GGTGTT-T----G-
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              3410  8 +     67014 GGTGTT-T----G-
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              3388  8 +     60816 GGTGTT-T----G-
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 3325  8 -     76454 GGTGTT-T----G-
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17340044  9 -  30362882 ggtgtt-t----gt
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         19403  9 -     62485 ggtgtt-t----gt
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Semnopithecus_entellus.k141_1572367                        2097  9 +     15331 gatgtc-t----tg
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       7494  9 +     20762 gatgtc-t----tg
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         117492  9 +    130994 gatgtc-t----tg
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           36283  9 +     46263 gatgtc-t----tg
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     29397  9 +     42640 gatgtc-t----tg
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        12446  9 +     30600 gatgtc-t----tg
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   98374  1 -    120886 --C-----------
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        13650  9 -  13920577 gTTGTT-T----TG
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tarsius_lariang.k141_609102                               25205  9 +     42269 tttgtt-t----gg
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               58521  9 +     65473 tttgtt-t----gg
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194006502  9 - 194193292 gatgtt-t----tg
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             38039  3 -     47444 --att---------
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Trachypithecus_auratus.k141_738098                        25604  9 +     38948 gatgtc-t----tg
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   19331  9 -     32910 gatgtc-t----tg
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                       718  9 -     12939 gatgtc-t----tg
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                        658  9 -     14244 gatgtc-t----tg
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           42051  9 -     54611 gatgtc-t----tg
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_878600                         881  9 +      1165 gatgtc-t----tg
i Trachypithecus_germaini.k141_878600                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     2029  9 -     15592 gatgtc-t----tg
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                           686  9 +     14371 gatgtc-t----tg
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  50443  9 +     51589 gatgtc-t----tg
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       13619  9 +     14732 gatgtc-t----tg
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       4096  9 -     28054 gatgtc-t----tg
i Trachypithecus_obscurus.k141_1115109                  C 0 I 1
s Trachypithecus_phayrei.ctg3                            44658891  9 -  44834318 gatgtc-t----tg
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       1194  9 +     13828 gatgtc-t----tg
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Varecia_rubra.k141_432109                                  4003  6 -     20643 ---ttg-t----gg
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             23544  6 -     33872 ---ttg-t----gg
i Varecia_variegata.k141_775891                         C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     13976  3 -     20485 --tct---------
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
e Eptesicus_fuscus.JH977687.1                             4702143 415 +   6522550 I
e Macroglossus_sobrinus.MacSob_scaffold_879                699974 431 +    802869 I
e Sorex_araneus.JH798170.1                               17748590 843 -  27805282 I
e Dinomys_branickii.DinBra_scaffold_1996                   156356 54 +    228994 I
e Erinaceus_europaeus.JH835290.1                         11530833 462 +  16010500 I
e Chaetophractus_vellerosus.ChaVel_scaffold_1070855          1230  0 -      1715 I
e Suricata_suricatta.SurSur_flattened_line_20339            25319 430 +     62062 I
e Ziphius_cavirostris.ZipCav_flattened_line_127025           5301 442 -      8775 I
e Zalophus_californianus.ZalCal_flattened_line_4097        212018 448 -    227762 I
e Vulpes_lagopus.VulLag_flattened_line_2045                135489 449 -    281493 I
e Vicugna_pacos.KN269600.1                                1523037 433 -   2331223 I
e Ursus_maritimus.KK498671.1                              6512543 460 +  28682327 I
e Uropsilus_gracilis.UroGra_scaffold_4143_0                 24925  0 -     25548 I
e Tursiops_truncatus.MRVK01000923.1                      69311805 441 -  96451834 I
e Trichechus_manatus.JH594618.1                          16079679 1700 +  31416278 I
e Tragulus_javanicus.TraJav_scaffold_14717                   3584 419 +     90398 I
e Tonatia_saurophila.TonSau_scaffold_3334                  134241 421 -    259118 I
e Tolypeutes_matacus.TolMat_scaffold_269431                  1990 2406 +      6782 I
e Tapirus_terrestris.TapTer_scaffold_14939                  55756 434 +     99546 I
e Tapirus_indicus.TapInd_scaffold_176                      805095 435 +   1148477 I
e Tamandua_tetradactyla.TamTet_scaffold_26877               13106 433 +     45698 I
e Tadarida_brasiliensis.TadBra_scaffold_145589               4174 407 -      6213 I
e Sus_scrofa.CM000824.4                                 189270228 447 + 218635234 I
e Spilogale_gracilis.SpiGra_flattened_line_905             232751 445 -    276980 I
e Solenodon_paradoxus.SolPar_flattened_line_1012            16376 416 +    739146 I
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   29737 434 -    114521 I
e Saiga_tatarica.SaiTat_scaffold_82192                       5983 428 +     12214 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                17647 435 +    109198 I
e Rhinolophus_sinicus.LVEH01000179.1                      1786172 430 +   2252614 I
e Rangifer_tarandus.RanTarSib_scaffold_24239                14178 431 +     68503 I
e Puma_concolor.QAVW01000427.1                          131532079 431 - 161321710 I
e Pteropus_vampyrus.KN525959.1                             602305 437 -   3946241 I
e Pteropus_alecto.KB031157.1                             13244354 438 -  17261082 I
e Pteronura_brasiliensis.PteBra_flattened_line_1343        243991 454 -    344369 I
e Pteronotus_parnellii.KE867983.1                            2230 422 -     27784 I
e Procavia_capensis.ProCapCap_scaffold_15315                74302 1939 +     78963 I
e Platanista_gangetica.PlaMin_flattened_line_72990           3771 443 +     21690 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            95224 410 +    112873 I
e Phocoena_phocoena.PhoPho_flattened_line_11948            119703 443 -    122454 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113416 447 -    135482 I
e Pantholops_hodgsonii.KE114631.1                         1064538 417 -   1292953 I
e Panthera_tigris.KE721879.1                              5025497 431 -   6340057 I
e Panthera_pardus.KV860323.1                              3635849 432 +  18214204 I
e Panthera_onca.PanOnc_flattened_line_1615                  32116 431 +    295523 I
e Ovis_canadensis.OviCan_scaffold_6251                      76891 417 +    140051 I
e Ovis_aries.CM001582.2                                 134075677 417 - 275406953 I
e Otocyon_megalotis.JAEUCK010005121.1                      305421 444 -    505867 I
e Orycteropus_afer.OryAfe_flattened_line_13509              41471 1764 -     66828 I
e Orcinus_orca.KB316965.1                                 7223086 443 -   7562323 I
e Okapia_johnstoni.LVCL01S0017931.1                         35255 573 +     78940 I
e Odocoileus_virginianus.KZ101650.1                       1078100 432 +   1425656 I
e Odobenus_rosmarus.KB229369.1                             677288 443 -   3126709 I
e Nyctereutes_procyonoides.CAJHUB010000786.1                28082 449 +   3668941 I
e Noctilio_leporinus.NocLep_scaffold_12062                  47676 415 +     94413 I
e Neophocaena_asiaeorientalis.KZ688543.1                  3949402 443 -   4490290 I
e Neomonachus_schauinslandi.NINY01007774.1                4482632 454 -  14209539 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3432 432 -      8794 I
e Myotis_myotis.MyoMyo_scaffold_6123                         8554 416 +     66751 I
e Myotis_lucifugus.GL429887.1                             3463359 417 -   3747815 I
e Myotis_davidii.KB114863.1                               5017463 416 +   6462685 I
e Myotis_brandtii.KE161952.1                               965772 418 +   8389877 I
e Mustela_putorius.JH417978.1                             4421898 453 -  28371801 I
e Murina_feae.MurFea_scaffold_2254                          17451 414 -    100666 I
e Mungos_mungo.MunMun_flattened_line_8729                  142653 430 -    168139 I
e Moschus_moschiferus.MosMos_scaffold_146101                 2972 432 -      4346 I
e Mormoops_blainvillei.MorMeg_scaffold_2952                159560 424 +    265003 I
e Monodon_monoceros.MonMon_M_scaffold_5598                 144790 442 +    154973 I
e Mirounga_angustirostris.MirAng_flattened_line_8852         9033 661 -    104932 I
e Miniopterus_schreibersii.MinSch_scaffold_24116            32480 421 +     45743 I
e Miniopterus_natalensis.LDJU01000022.1                   8207809 420 +  10048721 I
e Micronycteris_hirsuta.MicHir_scaffold_37978               21050 428 -     32043 I
e Microgale_talazaci.MicTal_scaffold_34660                  29351 1133 -     48017 I
e Mellivora_capensis.MelCap_flattened_line_146202             327 452 -      1999 I
e Megaderma_lyra.MegLyr_scaffold_3562                       62628 576 -    234502 I
e Manis_pentadactyla.KN017078.1                             34538 441 +     58827 I
e Manis_javanica.JSZB01003966.1                            144466 438 +    252755 I
e Lycaon_pictus.CM007556.1                               11085089 449 +  39895028 I
e Loxodonta_africana.GL010040.1                          20589215 1702 -  62548349 I
e Lipotes_vexillifer.KE558548.1                            134353 444 +   3060487 I
e Leptonychotes_weddellii.KB714749.1                      3083728 458 -   3498232 I
e Lasiurus_borealis.LasBor_scaffold_5102                   111937 417 -    115756 I
e Kogia_breviceps.KogBre_flattened_line_35920               22021 443 +     37189 I
e Inia_geoffrensis.IniGeo_flattened_line_66725               7195 437 +     17520 I
e Hyaena_hyaena.HyaHya_flattened_line_20729                 14013 474 -     67322 I
e Hipposideros_galeritus.HipGal_scaffold_104691              5946 409 -      9143 I
e Hipposideros_armiger.JXIK01001085.1                      276788 408 -    477199 I
e Hippopotamus_amphibius.HipAmp_scaffold_1308              145449 430 +    277961 I
e Heterohyrax_brucei.HetBruBak_scaffold_25354               54438 1939 +     73687 I
e Hemitragus_hylocrius.HemHyl_scaffold_16669                25884 416 -     91191 I
e Helogale_parvula.HelPar_flattened_line_22962              14960 432 +     53719 I
e Giraffa_tippelskirchi.LVKQ01S012154.1                    179385 717 -    189561 I
e Felis_nigripes.FelNig_flattened_line_8080                 18925 427 +     52776 I
e Felis_catus_fca126.CM031420.1                         129277790 427 - 158578461 I
e Eubalaena_japonica.EubJap_flattened_line_7756             59838 466 +     89355 I
e Eschrichtius_robustus.EscRob_flattened_line_685          313408 442 +    330699 I
e Equus_przewalskii.ATBW01073585.1                          11036 704 +     92910 I
e Equus_caballus.CM000402.2                              13349546 704 +  41866177 I
e Equus_asinus.JREZ01000062.1                             5851044 703 -   7175178 I
e Enhydra_lutris.KZ291749.1                              85869516 453 +  99434291 I
e Elephantulus_edwardii.JH947210.1                        7804622 10712 +  15467074 I
e Elaphurus_davidianus.JRFZ01086400.1                     1489870 432 +   1727528 I
e Eidolon_helvum.KE772537.1                                 10556 435 +     24177 I
e Echinops_telfairi.JH980316.1                           22994071  0 -  44670279 C
e Diceros_bicornis.DicBicMic_scaffold_9545                    953 1024 +    151128 I
e Dicerorhinus_sumatrensis.PEKH010003161.1                 320309 1016 +    993696 I
e Desmodus_rotundus.KZ672188.1                           18697183 419 -  18957592 I
e Delphinapterus_leucas.KZ290064.1                       80035206 438 -  96802777 I
e Dasypus_novemcinctus.JH568778.1                          180040 2424 -   6883506 I
e Cryptoprocta_ferox.CryFer_flattened_line_19014            49751 433 -     70449 I
e Crocidura_indochinensis.CroInd_scaffold_38409             18067 408 -     19186 I
e Craseonycteris_thonglongyai.CraTho_scaffold_22679         37588 826 -     40477 I
e Condylura_cristata.JH655880.1                          60611131 297 +  78930452 I
e Choloepus_hoffmanni.KN194586.1                           760141 439 +    964067 I
e Choloepus_didactylus.ChoDid_scaffold_36182                14830 439 -     21363 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_160623         1406 1024 -      9338 I
e Catagonus_wagneri.CatWag_scaffold_1305                   157166 412 -    276539 I
e Carollia_perspicillata.CarPer_scaffold_4436               57873 420 +     67245 I
e Capra_hircus.CM004562.1                               135704839 417 - 157403528 I
e Capra_aegagrus.CM003214.1                              21323612 417 + 157394656 I
e Canis_lupus_orion.HG994411.1                           16452657 449 -  44759192 I
e Canis_lupus_familiaris.chr31                           11085633 449 +  39895921 I
e Canis_lupus_dingo.QKWQ01001993.1                       11263104 449 -  35597290 I
e Canis_lupus_VD.CanFam_VD_scaffold_16982                   11461 449 +     87036 I
e CanFam4.chr31                                          11516443 449 +  39901454 I
e Camelus_ferus.KB016973.1                                2971365 436 +   6889770 I
e Camelus_dromedarius.KN271192.1                           395631 437 -  15254737 I
e Camelus_bactrianus.KN276303.1                           3217927 436 -   8989139 I
e Bubalus_bubalis.KI419065.1                              1229342 431 -   1914593 I
e Bos_taurus.CM000177.6                                 136293586 432 - 158972876 I
e Bos_mutus.JH883513.1                                     570227 432 -    998990 I
e Bos_indicus.CM003021.1                                138137853 432 - 161108492 I
e Bison_bison.KN264915.1                                  6557614 432 +   6870073 I
e Beatragus_hunteri.BeaHun_scaffold_21644                   41603 412 -     72089 I
e Balaenoptera_bonaerensis.DF502048.1                        3753 444 -     13118 I
e Balaenoptera_acutorostrata.KI537095.1                  26378522 443 +  51448160 I
e Artibeus_jamaicensis.ArtJam_scaffold_41619                 7075 421 -     29036 I
e Antilocapra_americana.AntAmePen_scaffold_42841            29107 427 +     33004 I
e Anoura_caudifer.AnoCau_scaffold_422                      388679 416 -    631301 I
e Ammotragus_lervia.NIVO01013474.1                        3518508 445 +   4113121 I
e Ailurus_fulgens.LNAC01000003.1                          7091784 657 -  16596857 I
e Ailuropoda_melanoleuca.LNAT01000321.1                  10655057 459 +  23371972 I
e Acinonyx_jubatus.LLWD01000356.1                         2031739 430 +   3721120 I
e Hylobates_pileatus_b.ContigUN                                 14622428 998 -  25970782 I
e Xerus_inauris.XerIna_scaffold_7898                       125751  0 -    134049 C
e Tupaia_tana.TupTan_flattened_line_68454                    3810  0 +     13056 C
e Tupaia_chinensis.KB320831.1                             2791553  0 -   3938065 C
e Spermophilus_dauricus.KZ294190.1                        2238651  0 +   2842873 C
e Nannospalax_galili.KL201303.1                            116888  0 +    362372 C
e Marmota_marmota.CZRN01000005.1                         36872570  0 +  64221397 C
e Ictidomys_tridecemlineatus.JH393315.1                   7124731  0 +  13083262 C
e Ellobius_lutescens.LOEQ01003611.1                        238324 20 -    369425 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               10646 14 +    209709 TTTG------TT---T-T-GTTTTG
s Allenopithecus_nigroviridis.k141_3103728                   1253 13 +      1665 TTTG------TT---T-T-GTTTT-
i Allenopithecus_nigroviridis.k141_3103728              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                          729 13 -     29318 tttg------tt---t-t-gtttt-
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_21674                            946 13 -      1421 tttg------tt---t-t-gtttt-
i Allochrocebus_preussi.k141_21674                      C 0 C 0
s Allochrocebus_solatus.k141_371672                           623 13 -     80423 tttg------tt---t-t-gtttt-
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             8911 10 -     18050 ----------TT---T-T-GTTTTG
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                 10024 10 -     11521 ----------TT---T-T-GTTTTG
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              9588 10 -     21359 ----------TT---T-T-GTTTTG
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_298055                                  880 14 +      1823 TTTG------TT---T-T-GTTTTG
i Alouatta_juara.k141_298055                            C 0 C 0
s Alouatta_macconnelli.k141_1331706                          8880 14 -     10438 tttg------tt---t-t-gttttg
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            5536 14 +      7047 TTTG------TT---T-T-GTTTTG
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             8820 10 +     10410 ----------TT---T-T-GTTTTG
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            2626 14 -      4927 tttg------tt---t-t-gttttg
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             5555 14 +      6429 TTTG------TT---T-T-GTTTTG
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Aotus_azarae.k141_3170768                                 61277  9 +     78111 TTTG------TT---C-T------G
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            4218  9 +     22701 TTTG------GT---T-T------G
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5748175  9 +   9889416 tttg------tt---t-t------g
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             4760  9 -    104377 TTTG------TT---T-T------G
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               4766  9 +     23246 TTTG------GT---T-T------G
i Aotus_vociferans.k141_718647                          C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9538012 14 +  39197703 CTTG------TT---T-T-ATTTTG
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             59296 14 +     85812 CTTG------TT---T-T-GTTTTG
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                10295 14 +     89302 CTTG------TT---T-T-GTTTTG
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             14800 14 -     58268 cttg------tt---t-t-attttg
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             62791 14 +    119057 CTTG------TT---T-T-GTTTTG
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               4760 14 -     25888 cttg------tt---t-t-gttttg
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Cacajao_ayresi.k141_724503                               112654 21 -    171031 tttgtttttttt---t-ttgttttg
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 11680 23 +    125063 TTTGTTTTTTTTGTTT-T-GTTTTG
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                13728 20 -    216513 tttggttttttt---t-t-gttttg
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        6268 20 -    134917 tttggttttttt---t-t-gttttg
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Cebus_albifrons.Contig22                               18889510  9 -  29618158 tttg------tt---t-t------g
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 7054  9 -     26817 tttg------tt---t-t------g
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                11294  9 +     25043 TTTG------TT---T-T------G
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cercocebus_atys.KQ010443.1                              6553945 13 +   6739814 tttg------tt---t-t-gtttt-
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      25422 13 +     60454 TTTG------TT---T-T-GTTTT-
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                           627 13 -     21101 TTTG------TT---T-T-GTTTT-
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         57937 13 -    107033 TTTG------TT---T-T-GTTTT-
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                         836  6 -     17608 -----------------t-gtttt-
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          28334  6 +     30494 -----------------T-GTTTT-
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          57177  6 -     59240 -----------------t-gtttt-
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                           878  6 +     16677 -----------------T-GTTTT-
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           23036  6 +     35983 -----------------T-GTTTT-
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11989567  6 +  12117833 -----------------T-GTTTT-
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46476322  6 +  46592721 -----------------T-GTTTT-
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      39873  6 -     45581 -----------------t-gtttt-
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                        882  6 +     35577 -----------------T-GTTTT-
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                         655  6 -     25661 -----------------t-gtttt-
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                         633  6 -     17744 -----------------t-gtttt-
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        20242  6 +     37128 -----------------T-GTTTT-
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Cheracebus_lucifer.k141_619653                             4304 14 -     18223 tttg------tt---t-t-gttttg
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             21327 14 +     25473 TTTG------TT---T-T-GTTTTG
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           40362 14 +     57117 TTTG------TT---T-T-GTTTTG
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          45041 14 +     54541 TTTG------TT---T-T-GTTTTG
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chiropotes_israelita.k141_1189915                         69863 14 +    196370 TTTG------TT---T-T-GTTTTG
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          14043 14 +     40510 TTTG------TT---T-T-GTTTTG
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15137789 13 -  15256731 tttg------tt---t-t-gtttt-
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      32836 13 -     53260 tttg------tt---t-t-gtttt-
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101143399 13 + 101219884 tttg------tt---t-t-gtttt-
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10885164 13 +  10971483 tttg------tt---t-t-gtttt-
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147663328 13 + 156195979 tttg------tt---t-t-gtttt-
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            15312 13 +     23629 tttg------tt---t-t-gtttt-
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Erythrocebus_patas.Contig8                             48769969 13 -  48907691 tttg------tt---t-t-gtttt-
i Erythrocebus_patas.Contig8                            C 0 C 0
s Gorilla_beringei.k141_111300                               4045  2 -     14630 tt-----------------------
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119651144  2 - 195582420 tt-----------------------
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Hoolock_leuconedys.ctg79                                      3431 14 -   7690867 tttg------tt---t-t-gttttg
i Hoolock_leuconedys.ctg79                                 I 1145 C 0
s Hylobates_abbotti.k141_493872                              3867  9 +      5897 TTTG------TT---T-T-G-----
i Hylobates_abbotti.k141_493872                         I 10 I 110
s Hylobates_agilis.k141_624065                                731  9 +      2112 TTGG------TT---T-T-G-----
i Hylobates_agilis.k141_624065                          I 1 C 0
s Hylobates_klossii.k141_466549                             10307  9 +     11537 Tttc------tt---t-t-g-----
i Hylobates_klossii.k141_466549                         I 1 I 4
s Hylobates_muelleri.k141_1389047                             668  9 -      2977 tttg------tt---t-t-g-----
i Hylobates_muelleri.k141_1389047                       I 10 I 110
s Hylobates_pileatus_a.tarseq_592                             33293 14 -     60944 tttg------tt---t-t-gttttg
i Hylobates_pileatus_a.tarseq_592                         I 1 C 0
s Lagothrix_lagothricha.k141_12968                          48881 11 -    147782 tttg------tt---t-t-gtt---
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lophocebus_aterrimus.ctg55                             19247034 13 +  19376315 TTTG------TT---T-T-GTTTT-
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Macaca_arctoides.k141_2201161                             18711 11 +     74745 --TG------TT---T-T-GTTCT-
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12705230 13 +  12821369 TTTG------TT---T-T-GTTCT-
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                 875 13 -      3136 tttg------tt---t-t-gttct-
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           45626 13 +     63263 TTTG------TT---T-T-GTTCT-
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                  392 13 -      2568 tttg------tt---t-t-gttct-
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                  900 13 -      7381 tttg------tt---t-t-gttct-
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  44137 13 -     79256 tttg------tt---t-t-gttct-
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196034307 13 + 196197964 tttg------tt---t-t-gttct-
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11444412 13 +  11645122 tttg------tt---t-t-gttct-
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   3084 13 -     46448 tttg------tt---t-t-gttct-
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                 756 13 -     13212 tttg------ct---t-t-gttct-
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 14498 13 -     55006 tttg------tt---t-t-gttct-
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43839535 13 +  43892939 TTTG------TT---T-T-GTTCT-
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               15785 13 -     24607 tttg------tt---t-t-gttct-
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               3089 13 -     27140 tttg------tt---t-t-gttct-
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43436193 13 -  43563597 TTTG------TT---T-T-GTTTT-
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4449019 13 -   4543643 tttg------tt---t-t-gtttt-
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Miopithecus_ogouensis.k141_2935907                          746 13 +     29742 TTTG------TT---T-T-GTTTT-
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Nasalis_larvatus.k141_153429                               7247 13 +     48152 TTTG------TT---T-T-GTTTT-
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Nomascus_annamensis.k141_302224                             706  9 +      1516 -----------T---T-T-GTTTTG
i Nomascus_annamensis.k141_302224                       C 0 C 0
s Nomascus_concolor.k141_49591                               1827 14 +      2014 TTTG------TT---T-T-GTTTTG
i Nomascus_concolor.k141_49591                          C 0 C 0
s Nomascus_gabriellae.k141_642452                             752  9 +      2851 -----------t---t-t-gttttg
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             23667  9 -  18771707 -----------t---t-t-gttttg
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  1380  9 +      4512 -----------T---T-T-GTTTTG
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Pan_paniscus.CM003386.1                               127573391  7 - 205426864 -----------------t-gttttg
i Pan_paniscus.CM003386.1                               I 3 C 0
s Pan_troglodytes.KZ622857.1                               326371 15 +    772158 tttg------tt---tgt-tttttg
i Pan_troglodytes.KZ622857.1                            C 0 I 4
s Papio_anubis.CM001492.2                               188154984 13 - 188283584 tttg------tt---t-t-gtttt-
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             3301 13 +      5367 TTTG------TT---T-T-GTTTT-
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47512372 13 +  47705337 TTTG------TT---T-T-GTTTT-
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 66350 13 -    104429 TTTG------TT---T-T-GTTTT-
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    4882 13 +     14967 TTTG------TT---T-T-GTTTT-
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                  743 13 -      7628 TTTG------TT---T-T-GTTTT-
i Papio_ursinus.k141_1345919                            C 0 C 0
s Piliocolobus_badius.k141_1987485                            770 13 -      5908 tttg------tt---t-t-gtttt-
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       1389 13 -     17985 tttg------tt---t-t-gtttt-
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                             756 13 +      7694 TGTG------TT---T-T-GTTTT-
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26739234 13 +  26888534 tttg------tt---t-t-gtttt-
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pithecia_albicans.k141_991845                             42368 14 -     61926 TTTG------TT---T-T-GTTTTG
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        23797 14 +     78826 TTTG------TT---T-T-GTTTTG
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              7748 14 -     15800 tttg------tt---t-t-gttatg
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        10946 14 -     16101 TTTG------TT---T-T-GTTTTG
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          4255 14 +      9673 TTTG------TT---T-T-GTTTTG
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13473249 14 -  19735023 TTTG------TT---T-T-GTTTTG
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           12157 14 -     31692 TTTG------TT---T-T-GTTTTG
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       21591 14 +     44506 TTTG------TT---T-T-GTTTTG
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        21801 14 +     67491 TTTG------TT---T-T-GTTTTT
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      12042 14 -     98129 TTTG------TT---T-T-GTTTTG
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     21647 13 +    147771 TTTG------TT---T-T-GTTTT-
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        21896 14 -     23762 tttg------tt---t-t-gttttt
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          2363 14 -     55515 TTTG------TT---T-T-GTTTTT
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         21716 14 +    152463 TTTG------TT---T-T-GTTTTG
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      8476 14 +      8943 TTTG------TT---T-T-GTTTTG
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                         11436 14 +    134592 TTTG------TT---T-T-GTTTTT
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          22026 14 -     75465 TTTG------TT---T-T-GTTTTG
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              185923  7 -    373494 -----------------t-gttttg
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19806571  7 +  19899266 -----------------t-gttttg
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               4491 13 -     15069 tttg------tt---t-t-gtttt-
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              4625 13 +     14865 TTTG------TT---T-T-GTTTT-
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Pygathrix_cinerea.k141_374971                             28614  8 +     56732 TTTG------TT---T-T-------
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6805105  8 +   6970761 TTTG------TT---T-T-------
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             4499  8 +     18040 TTTG------TT---T-T-------
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rhinopithecus_bieti.k119_1391695                            722 13 -      1866 tttg------tt---t-t-gtttt-
i Rhinopithecus_bieti.k119_1391695                      C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206376379 13 - 206558726 tttg------tt---t-t-gtttt-
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44855279 13 -  45163003 tttg------tt---t-t-gtttt-
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15671465  5 -  43202129 ----------tt---t-t------g
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        3382  5 +     34089 ----------TT---T-T------G
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              3323  5 -     60842 ----------TT---T-T------G
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              3418  5 +     67014 ----------TT---T-T------G
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              3396  5 +     60816 ----------TT---T-T------G
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 3333  5 -     76454 ----------TT---T-T------G
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17340053  9 -  30362882 tttg------tt---t-t------g
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         19412  9 -     62485 tttg------tt---t-t------g
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Semnopithecus_entellus.k141_1572367                        2106 13 +     15331 tttg------tt---t-t-gtttt-
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       7503 13 +     20762 tttg------tt---t-t-gtttt-
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         117501 13 +    130994 tttg------tt---t-t-gtttt-
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           36292 13 +     46263 tttg------tt---t-t-gtttt-
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     29406 13 +     42640 tttg------tt---t-t-gtttt-
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        12455  8 +     30600 tttg------tt---t-t-------
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        13659 14 -  13920577 TTTG------TT---T-T-GTTTTG
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Theropithecus_gelada.CM009951.1                       194006511 13 - 194193292 tttg------tt---t-t-gtttt-
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Trachypithecus_auratus.k141_738098                        25613 13 +     38948 tttg------tt---t-t-gtttt-
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   19340 13 -     32910 tttg------tt---t-t-gtttt-
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                       727 13 -     12939 tttg------tt---t-t-gtttt-
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                        667  8 -     14244 tttg------tt---t-t-------
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           42060 13 -     54611 tttg------tt---t-t-gtttt-
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_878600                         890 13 +      1165 tttg------tt---t-t-gtttt-
i Trachypithecus_germaini.k141_878600                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     2038 13 -     15592 tttg------tt---c-t-gtttt-
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                           695 13 +     14371 tttg------tt---t-t-gtttt-
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  50452  8 +     51589 tttg------tt---t-t-------
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       13628 13 +     14732 tttg------tt---t-t-gtttt-
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       4106  7 -     28054 ---------------t-t-gtttt-
i Trachypithecus_obscurus.k141_1115109                  I 1 C 0
s Trachypithecus_phayrei.ctg3                            44658900 13 -  44834318 tttg------tt---t-t-gtttt-
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       1203 13 +     13828 tttg------tt---t-t-gtttt-
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
e Eptesicus_fuscus.JH977687.1                             4702143 415 +   6522550 I
e Macroglossus_sobrinus.MacSob_scaffold_879                699974 431 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             38042  0 -     47444 C
e Petromus_typicus.PetTyp_scaffold_33007                    10982  0 -     36578 C
e Sorex_araneus.JH798170.1                               17748590 843 -  27805282 I
e Dinomys_branickii.DinBra_scaffold_1996                   156356 54 +    228994 I
e Erinaceus_europaeus.JH835290.1                         11530833 462 +  16010500 I
e Chaetophractus_vellerosus.ChaVel_scaffold_1070855          1230  0 -      1715 I
e Aplodontia_rufa.AprRuf_scaffold_156013                     2576  0 +      5067 C
e Oryctolagus_cuniculus.CM000803.1                      141874375  0 + 163896628 C
e Ochotona_princeps.JH802095.1                            4994749  0 -  23139505 C
e Lepus_americanus.LepAme_scaffold_62849                    11717  0 +     22452 C
e Perognathus_longimembris.PerPac_flattened_line_22291      42371  1 -     45160 I
e Dipodomys_stephensi.DipSte_scaffold_44365                 26568  1 +     28912 I
e Dipodomys_ordii.KN672545.1                              3654932  1 +   4240102 I
e Suricata_suricatta.SurSur_flattened_line_20339            25319 430 +     62062 I
e Ziphius_cavirostris.ZipCav_flattened_line_127025           5301 442 -      8775 I
e Zalophus_californianus.ZalCal_flattened_line_4097        212018 448 -    227762 I
e Vulpes_lagopus.VulLag_flattened_line_2045                135489 449 -    281493 I
e Vicugna_pacos.KN269600.1                                1523037 433 -   2331223 I
e Ursus_maritimus.KK498671.1                              6512543 460 +  28682327 I
e Uropsilus_gracilis.UroGra_scaffold_4143_0                 24925  0 -     25548 I
e Tursiops_truncatus.MRVK01000923.1                      69311805 441 -  96451834 I
e Trichechus_manatus.JH594618.1                          16079679 1700 +  31416278 I
e Tragulus_javanicus.TraJav_scaffold_14717                   3584 419 +     90398 I
e Tonatia_saurophila.TonSau_scaffold_3334                  134241 421 -    259118 I
e Tolypeutes_matacus.TolMat_scaffold_269431                  1990 2406 +      6782 I
e Tapirus_terrestris.TapTer_scaffold_14939                  55756 434 +     99546 I
e Tapirus_indicus.TapInd_scaffold_176                      805095 435 +   1148477 I
e Tamandua_tetradactyla.TamTet_scaffold_26877               13106 433 +     45698 I
e Tadarida_brasiliensis.TadBra_scaffold_145589               4174 407 -      6213 I
e Sus_scrofa.CM000824.4                                 189270228 447 + 218635234 I
e Spilogale_gracilis.SpiGra_flattened_line_905             232751 445 -    276980 I
e Solenodon_paradoxus.SolPar_flattened_line_1012            16376 416 +    739146 I
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   29737 434 -    114521 I
e Saiga_tatarica.SaiTat_scaffold_82192                       5983 428 +     12214 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                17647 435 +    109198 I
e Rhinolophus_sinicus.LVEH01000179.1                      1786172 430 +   2252614 I
e Rangifer_tarandus.RanTarSib_scaffold_24239                14178 431 +     68503 I
e Puma_concolor.QAVW01000427.1                          131532079 431 - 161321710 I
e Pteropus_vampyrus.KN525959.1                             602305 437 -   3946241 I
e Pteropus_alecto.KB031157.1                             13244354 438 -  17261082 I
e Pteronura_brasiliensis.PteBra_flattened_line_1343        243991 454 -    344369 I
e Pteronotus_parnellii.KE867983.1                            2230 422 -     27784 I
e Procavia_capensis.ProCapCap_scaffold_15315                74302 1939 +     78963 I
e Platanista_gangetica.PlaMin_flattened_line_72990           3771 443 +     21690 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            95224 410 +    112873 I
e Phocoena_phocoena.PhoPho_flattened_line_11948            119703 443 -    122454 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113416 447 -    135482 I
e Pantholops_hodgsonii.KE114631.1                         1064538 417 -   1292953 I
e Panthera_tigris.KE721879.1                              5025497 431 -   6340057 I
e Panthera_pardus.KV860323.1                              3635849 432 +  18214204 I
e Panthera_onca.PanOnc_flattened_line_1615                  32116 431 +    295523 I
e Ovis_canadensis.OviCan_scaffold_6251                      76891 417 +    140051 I
e Ovis_aries.CM001582.2                                 134075677 417 - 275406953 I
e Otocyon_megalotis.JAEUCK010005121.1                      305421 444 -    505867 I
e Orycteropus_afer.OryAfe_flattened_line_13509              41471 1764 -     66828 I
e Orcinus_orca.KB316965.1                                 7223086 443 -   7562323 I
e Okapia_johnstoni.LVCL01S0017931.1                         35255 573 +     78940 I
e Odocoileus_virginianus.KZ101650.1                       1078100 432 +   1425656 I
e Odobenus_rosmarus.KB229369.1                             677288 443 -   3126709 I
e Nyctereutes_procyonoides.CAJHUB010000786.1                28082 449 +   3668941 I
e Noctilio_leporinus.NocLep_scaffold_12062                  47676 415 +     94413 I
e Neophocaena_asiaeorientalis.KZ688543.1                  3949402 443 -   4490290 I
e Neomonachus_schauinslandi.NINY01007774.1                4482632 454 -  14209539 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3432 432 -      8794 I
e Myotis_myotis.MyoMyo_scaffold_6123                         8554 416 +     66751 I
e Myotis_lucifugus.GL429887.1                             3463359 417 -   3747815 I
e Myotis_davidii.KB114863.1                               5017463 416 +   6462685 I
e Myotis_brandtii.KE161952.1                               965772 418 +   8389877 I
e Mustela_putorius.JH417978.1                             4421898 453 -  28371801 I
e Murina_feae.MurFea_scaffold_2254                          17451 414 -    100666 I
e Mungos_mungo.MunMun_flattened_line_8729                  142653 430 -    168139 I
e Moschus_moschiferus.MosMos_scaffold_146101                 2972 432 -      4346 I
e Mormoops_blainvillei.MorMeg_scaffold_2952                159560 424 +    265003 I
e Monodon_monoceros.MonMon_M_scaffold_5598                 144790 442 +    154973 I
e Mirounga_angustirostris.MirAng_flattened_line_8852         9033 661 -    104932 I
e Miniopterus_schreibersii.MinSch_scaffold_24116            32480 421 +     45743 I
e Miniopterus_natalensis.LDJU01000022.1                   8207809 420 +  10048721 I
e Micronycteris_hirsuta.MicHir_scaffold_37978               21050 428 -     32043 I
e Microgale_talazaci.MicTal_scaffold_34660                  29351 1133 -     48017 I
e Mellivora_capensis.MelCap_flattened_line_146202             327 452 -      1999 I
e Megaderma_lyra.MegLyr_scaffold_3562                       62628 576 -    234502 I
e Manis_pentadactyla.KN017078.1                             34538 441 +     58827 I
e Manis_javanica.JSZB01003966.1                            144466 438 +    252755 I
e Lycaon_pictus.CM007556.1                               11085089 449 +  39895028 I
e Loxodonta_africana.GL010040.1                          20589215 1702 -  62548349 I
e Lipotes_vexillifer.KE558548.1                            134353 444 +   3060487 I
e Leptonychotes_weddellii.KB714749.1                      3083728 458 -   3498232 I
e Lasiurus_borealis.LasBor_scaffold_5102                   111937 417 -    115756 I
e Kogia_breviceps.KogBre_flattened_line_35920               22021 443 +     37189 I
e Inia_geoffrensis.IniGeo_flattened_line_66725               7195 437 +     17520 I
e Hyaena_hyaena.HyaHya_flattened_line_20729                 14013 474 -     67322 I
e Hipposideros_galeritus.HipGal_scaffold_104691              5946 409 -      9143 I
e Hipposideros_armiger.JXIK01001085.1                      276788 408 -    477199 I
e Hippopotamus_amphibius.HipAmp_scaffold_1308              145449 430 +    277961 I
e Heterohyrax_brucei.HetBruBak_scaffold_25354               54438 1939 +     73687 I
e Hemitragus_hylocrius.HemHyl_scaffold_16669                25884 416 -     91191 I
e Helogale_parvula.HelPar_flattened_line_22962              14960 432 +     53719 I
e Giraffa_tippelskirchi.LVKQ01S012154.1                    179385 717 -    189561 I
e Felis_nigripes.FelNig_flattened_line_8080                 18925 427 +     52776 I
e Felis_catus_fca126.CM031420.1                         129277790 427 - 158578461 I
e Eubalaena_japonica.EubJap_flattened_line_7756             59838 466 +     89355 I
e Eschrichtius_robustus.EscRob_flattened_line_685          313408 442 +    330699 I
e Equus_przewalskii.ATBW01073585.1                          11036 704 +     92910 I
e Equus_caballus.CM000402.2                              13349546 704 +  41866177 I
e Equus_asinus.JREZ01000062.1                             5851044 703 -   7175178 I
e Enhydra_lutris.KZ291749.1                              85869516 453 +  99434291 I
e Elephantulus_edwardii.JH947210.1                        7804622 10712 +  15467074 I
e Elaphurus_davidianus.JRFZ01086400.1                     1489870 432 +   1727528 I
e Eidolon_helvum.KE772537.1                                 10556 435 +     24177 I
e Echinops_telfairi.JH980316.1                           22994071  0 -  44670279 C
e Diceros_bicornis.DicBicMic_scaffold_9545                    953 1024 +    151128 I
e Dicerorhinus_sumatrensis.PEKH010003161.1                 320309 1016 +    993696 I
e Desmodus_rotundus.KZ672188.1                           18697183 419 -  18957592 I
e Delphinapterus_leucas.KZ290064.1                       80035206 438 -  96802777 I
e Dasypus_novemcinctus.JH568778.1                          180040 2424 -   6883506 I
e Cryptoprocta_ferox.CryFer_flattened_line_19014            49751 433 -     70449 I
e Crocidura_indochinensis.CroInd_scaffold_38409             18067 408 -     19186 I
e Craseonycteris_thonglongyai.CraTho_scaffold_22679         37588 826 -     40477 I
e Condylura_cristata.JH655880.1                          60611131 297 +  78930452 I
e Choloepus_hoffmanni.KN194586.1                           760141 439 +    964067 I
e Choloepus_didactylus.ChoDid_scaffold_36182                14830 439 -     21363 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_160623         1406 1024 -      9338 I
e Catagonus_wagneri.CatWag_scaffold_1305                   157166 412 -    276539 I
e Carollia_perspicillata.CarPer_scaffold_4436               57873 420 +     67245 I
e Capra_hircus.CM004562.1                               135704839 417 - 157403528 I
e Capra_aegagrus.CM003214.1                              21323612 417 + 157394656 I
e Canis_lupus_orion.HG994411.1                           16452657 449 -  44759192 I
e Canis_lupus_familiaris.chr31                           11085633 449 +  39895921 I
e Canis_lupus_dingo.QKWQ01001993.1                       11263104 449 -  35597290 I
e Canis_lupus_VD.CanFam_VD_scaffold_16982                   11461 449 +     87036 I
e CanFam4.chr31                                          11516443 449 +  39901454 I
e Camelus_ferus.KB016973.1                                2971365 436 +   6889770 I
e Camelus_dromedarius.KN271192.1                           395631 437 -  15254737 I
e Camelus_bactrianus.KN276303.1                           3217927 436 -   8989139 I
e Bubalus_bubalis.KI419065.1                              1229342 431 -   1914593 I
e Bos_taurus.CM000177.6                                 136293586 432 - 158972876 I
e Bos_mutus.JH883513.1                                     570227 432 -    998990 I
e Bos_indicus.CM003021.1                                138137853 432 - 161108492 I
e Bison_bison.KN264915.1                                  6557614 432 +   6870073 I
e Beatragus_hunteri.BeaHun_scaffold_21644                   41603 412 -     72089 I
e Balaenoptera_bonaerensis.DF502048.1                        3753 444 -     13118 I
e Balaenoptera_acutorostrata.KI537095.1                  26378522 443 +  51448160 I
e Artibeus_jamaicensis.ArtJam_scaffold_41619                 7075 421 -     29036 I
e Antilocapra_americana.AntAmePen_scaffold_42841            29107 427 +     33004 I
e Anoura_caudifer.AnoCau_scaffold_422                      388679 416 -    631301 I
e Ammotragus_lervia.NIVO01013474.1                        3518508 445 +   4113121 I
e Ailurus_fulgens.LNAC01000003.1                          7091784 657 -  16596857 I
e Ailuropoda_melanoleuca.LNAT01000321.1                  10655057 459 +  23371972 I
e Acinonyx_jubatus.LLWD01000356.1                         2031739 430 +   3721120 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           17738  0 -    119109 C
e Glis_glis.GliGli_scaffold_79770                           11388  3 -     18683 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     13979  0 -     20485 C
e Jaculus_jaculus.JH725517.1                              8564406  0 +  11848649 C
e Hylobates_pileatus_b.ContigUN                                 14622428 998 -  25970782 I
e Allactaga_bullata.AllBul_scaffold_70162                   11663  0 -     22067 C
e Galeopterus_variegatus.GalVar_scaffold_354               155011  0 +    324696 C
e Microtus_ochrogaster.CM001673.1                        22818586  0 -  98408828 C
e Xerus_inauris.XerIna_scaffold_7898                       125751  0 -    134049 C
e Varecia_variegata.k141_775891                             23550  0 -     33872 C
e Varecia_rubra.k141_432109                                  4009  0 -     20643 C
e Tupaia_tana.TupTan_flattened_line_68454                    3810  0 +     13056 C
e Tupaia_chinensis.KB320831.1                             2791553  0 -   3938065 C
e Tarsius_wallacei.k141_48636                               58530  0 +     65473 C
e Tarsius_lariang.k141_609102                               25214  0 +     42269 C
e Spermophilus_dauricus.KZ294190.1                        2238651  0 +   2842873 C
e Sigmodon_hispidus.SigHis_scaffold_11332                   98375  0 -    120886 C
e Rattus_norvegicus.chr11                                13914110  0 +  90463843 C
e Psammomys_obesus.NESX01026517.1                           32081  0 +     77221 C
e Propithecus_verreauxi.k141_158021                         37905  0 -     48185 C
e Propithecus_tattersalli.k141_907138                       15633  0 -     53241 C
e Propithecus_perrieri.k141_7554                            15997  0 +     27322 C
e Propithecus_edwardsi.k141_1317105                         34077  0 -     44753 C
e Propithecus_diadema.k141_577245                           41687  0 +     52369 C
e Propithecus_coronatus.k141_1353159                         2352  0 +     11805 C
e Propithecus_coquerelli.NW_012147997.1                    666524  0 -   2312742 C
e Prolemur_simus.MPIZ01000048.1                           6847302  0 +  12164890 C
e Peromyscus_maniculatus.KI615518.1                       4948796  1 -   8017169 I
e Perodicticus_potto.k141_713187                            23106  0 -     27972 C
e Perodicticus_ibeanus.k141_117958                           3808  0 -     23713 C
e Otolemur_garnettii.GL873528.1                          18007194  0 -  38779656 C
e Otolemur_crassicaudatus.k141_321880                       37766  0 +     38679 C
e Onychomys_torridus.OnyTor_scaffold_12578                  35605  0 +     62360 C
e Ondatra_zibethicus.OndZib_scaffold_6821                  123834  0 +    145789 C
e Octodon_degus.JH651621.1                                3684297  0 +  10294119 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65668213  0 +  89412551 C
e Nycticebus_coucang.k141_2051882                            2604  0 +      6470 C
e Nycticebus_bengalensis.LG16                            65565875  0 -  95554990 C
e Nannospalax_galili.KL201303.1                            116888  0 +    362372 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     88760  0 -    117718 C
e Muscardinus_avellanarius.MusAve_scaffold_9643              9863  3 +     98495 I
e Mus_spretus.CM004110.1                                 74329283  0 +  97876770 C
e Mus_pahari.LT608305.1                                  67554345  0 +  89017189 C
e Mus_musculus.chr16                                     75488104  0 +  98207768 C
e Mus_caroli.LT608236.1                                  70765067  0 +  92629107 C
e Mirza_zaza.k141_226143                                     4326  0 +      8497 C
e Microcebus_murinus.CM007691.1                          16508927  0 +  47401472 C
e Mesocricetus_auratus.KB708139.1                         1045466  0 -  26018355 C
e Meriones_unguiculatus.MerUng_scaffold_52233               10531  0 +     15977 C
e Marmota_marmota.CZRN01000005.1                         36872570  0 +  64221397 C
e Loris_tardigradus.ctg97                                 3777183  0 +   6799190 C
e Loris_lydekkerianus.k141_550999                            9434  0 +     84689 C
e Lepilemur_septentrionalis.k141_578524                     30323  0 -     33031 C
e Lepilemur_ruficaudatus.k141_617879                        77309  0 +    116806 C
e Lepilemur_dorsalis.k141_134267                            52059  0 +     63517 C
e Lepilemur_ankaranensis.k141_884009                        22684  0 +     39228 C
e Lemur_catta.scaffold_1                                258405921  0 - 285822530 C
e Indri_indri.k141_4418183                                    184  0 -      1457 C
e Ictidomys_tridecemlineatus.JH393315.1                   7124731  0 +  13083262 C
e Hystrix_cristata.HysCri_scaffold_50788                     4887  0 +     22540 C
e Heterocephalus_glaber.JH602058.1                        2549833  0 +  31725842 C
e Hapalemur_occidentalis.k141_797938                        44239  0 -     54384 C
e Hapalemur_meridionalis.k141_186231                        27641  0 -     42470 C
e Hapalemur_griseus.k141_1387522                             4365  0 +     56096 C
e Hapalemur_gilberti.k141_1254239                            8736  0 +      9690 C
e Hapalemur_alaotrensis.k141_1280836                          586  0 +     10286 C
e Graphiurus_murinus.GraMur_scaffold_4493                   76135 27 +    118900 I
e Galagoides_demidoff.k141_1769638                           9118  0 +     27357 C
e Galago_senegalensis.k141_964197                           12049  0 -     43889 C
e Galago_moholi.ctg555                                     209670  0 -    847004 C
e Fukomys_damarensis.KN123630.1                          13891437  0 -  19261668 C
e Eulemur_sanfordi.k141_186399                              14538  0 -     29447 C
e Eulemur_rufus.k141_1620292                                31816  0 +     46535 C
e Eulemur_rubriventer.k141_411740                           17083  0 +     26808 C
e Eulemur_mongoz.k141_825972                                14624  0 +     27497 C
e Eulemur_macaco.k141_1341545                               14351  0 +     16540 C
e Eulemur_fulvus.k141_653297                                 9972  0 +    109717 C
e Eulemur_flavifrons.k141_903901                             6489  0 +     60246 C
e Eulemur_coronatus.k141_3240342                            10173  0 +     36558 C
e Eulemur_collaris.k141_311830                               3697  0 -      6809 C
e Eulemur_albifrons.k141_715837                              3764  0 +     13586 C
e Ellobius_talpinus.LOJH01090055.1                           5396  0 -      7838 C
e Ellobius_lutescens.LOEQ01003611.1                        238324 20 -    369425 I
e Dolichotis_patagonum.DolPat_scaffold_14102                34836  0 -     73477 C
e Daubentonia_madagascariensis.ctg11                     16843569  0 +  31942871 C
e Dasyprocta_punctata.DasPun_flattened_line_634             57587  0 -    236241 C
e Cuniculus_paca.CunPac_flattened_line_16637                16497  0 +     26546 C
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 29465  0 -     67205 C
e Ctenodactylus_gundi.CteGun_scaffold_447                  206904  0 -    956709 C
e Cricetulus_griseus.LT883672.1                          53027728  0 +  72327488 C
e Cricetomys_gambianus.CriGam_scaffold_949                 277041  0 -    399297 C
e Chinchilla_lanigera.JH721867.1                         15960487  0 +  43084221 C
e Cheirogaleus_medius.k141_133808                            6760  0 +     13308 C
e Cheirogaleus_major.k141_1157592                           57717  0 -     68416 C
e Cephalopachus_bancanus.k141_702587                         6764  0 +     21754 C
e Cavia_tschudii.CavTsc_scaffold_488                       175468  0 +    436027 C
e Cavia_porcellus.DS562889.1                             15797277  0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15785343  0 -  24422027 C
e Castor_canadensis.CasCan_scaffold_47037                   29421  0 +     33760 C
e Carlito_syrichta.NW_007248099.1                          307731  0 +    345090 C
e Capromys_pilorides.CapPil_scaffold_979108                   696  0 -      1248 C
e Avahi_peyrierasi.k141_2689020                              1742  0 +      2719 C
e Avahi_laniger.k141_2840928                                 5422  0 -     16375 C
e Arctocebus_calabarensis.k141_1161114                      16581  0 +     17483 C
e Acomys_cahirinus.AcoCah_scaffold_1625                    111076  0 -    189883 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               10660 4 +    209709 T-TTT
s Alouatta_belzebul.k141_1818029                             8921 4 -     18050 T-TTC
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                 10034 4 -     11521 T-TTT
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              9598 4 -     21359 T-TTC
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_298055                                  894 4 +      1823 T-TTT
i Alouatta_juara.k141_298055                            C 0 C 0
s Alouatta_macconnelli.k141_1331706                          8894 4 -     10438 t-ttt
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            5550 4 +      7047 T-TTT
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             8830 4 +     10410 T-TTT
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            2640 4 -      4927 t-ttt
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             5569 4 +      6429 T-TTT
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Aotus_azarae.k141_3170768                                 61286 4 +     78111 T-TTT
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            4227 4 +     22701 G-TTT
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5748184 4 +   9889416 t-ttt
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             4769 4 -    104377 T-TTT
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               4775 4 +     23246 T-TTT
i Aotus_vociferans.k141_718647                          C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9538026 4 +  39197703 T-TTT
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             59310 4 +     85812 T-TTT
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                10309 4 +     89302 T-TTT
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             14814 4 -     58268 t-ttt
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             62805 4 +    119057 T-TTT
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               4774 4 -     25888 t-ttt
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Cacajao_ayresi.k141_724503                               112675 4 -    171031 t-ttt
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 11703 4 +    125063 T-TTT
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                13748 4 -    216513 t-ttt
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        6288 4 -    134917 t-ttt
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Cebus_albifrons.Contig22                               18889519 4 -  29618158 t-ttt
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 7063 4 -     26817 t-ttt
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                11303 4 +     25043 T-TTT
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cheracebus_lucifer.k141_619653                             4318 4 -     18223 t-ttt
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             21341 4 +     25473 T-TTT
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           40376 4 +     57117 T-TTT
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          45055 4 +     54541 T-TTT
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chiropotes_israelita.k141_1189915                         69877 4 +    196370 T-TTT
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          14057 4 +     40510 T-TTT
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Gorilla_beringei.k141_111300                               4047 2 -     14630 ---tt
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119651146 2 - 195582420 ---tt
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Hoolock_leuconedys.ctg79                                      3445 4 -   7690867 t-ttt
i Hoolock_leuconedys.ctg79                                 C 0 I 5
s Hylobates_pileatus_a.tarseq_592                             33307 4 -     60944 t-Ttt
i Hylobates_pileatus_a.tarseq_592                         C 0 I 5
s Lagothrix_lagothricha.k141_12968                          48892 2 -    147782 ---tt
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Nomascus_annamensis.k141_302224                             715 4 +      1516 T-TTT
i Nomascus_annamensis.k141_302224                       C 0 I 5
s Nomascus_concolor.k141_49591                               1841 4 +      2014 T-TTT
i Nomascus_concolor.k141_49591                          C 0 I 5
s Nomascus_gabriellae.k141_642452                             761 3 +      2851 t-tt-
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             23676 4 -  18771707 t-ttt
i Nomascus_siki_b.tarseq_80                         C 0 I 5
s Nomascus_siki_a.k141_595747                                  1389 4 +      4512 T-TTT
i Nomascus_siki_a.k141_595747                             C 0 I 5
s Pan_paniscus.CM003386.1                               127573398 4 - 205426864 t-ttt
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120150551 4 - 196562556 t-ttt
i Pan_troglodytes.CM009241.2                            I 19 I 3
s Pithecia_albicans.k141_991845                             42382 4 -     61926 T-TTT
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        23811 4 +     78826 T-TTT
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              7762 4 -     15800 t-ttt
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        10960 4 -     16101 T-TTT
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          4269 4 +      9673 T-TTT
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13473263 4 -  19735023 T-TTT
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           12171 4 -     31692 T-TTT
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       21605 4 +     44506 T-TTT
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        21815 4 +     67491 T-TTT
i Plecturocebus_brunneus.k141_498086                    C 0 I 2
s Plecturocebus_caligatus.k141_2539816                      12056 4 -     98129 T-TTT
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        21910 5 -     23762 ttttt
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          2377 4 -     55515 T-TTT
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         21730 4 +    152463 T-TTT
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      8490 4 +      8943 T-TTT
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                         11450 4 +    134592 T-TTT
i Plecturocebus_miltoni.k141_841561                     C 0 I 2
s Plecturocebus_moloch.k141_890597                          22040 4 -     75465 T-TTT
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              185930 4 -    373494 t-ttt
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19806578 4 +  19899266 t-ttt
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15671470 4 -  43202129 t-ttt
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        3387 4 +     34089 T-TTT
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              3328 4 -     60842 T-TTT
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              3423 4 +     67014 T-TTT
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              3401 4 +     60816 T-TTT
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 3338 4 -     76454 T-TTT
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17340062 4 -  30362882 t-ttt
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         19421 4 -     62485 t-ttt
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        13673 4 -  13920577 T-TTT
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
e Eptesicus_fuscus.JH977687.1                             4702143 415 +   6522550 I
e Macroglossus_sobrinus.MacSob_scaffold_879                699974 431 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             38042 0 -     47444 C
e Petromus_typicus.PetTyp_scaffold_33007                    10982 0 -     36578 C
e Sorex_araneus.JH798170.1                               17748590 843 -  27805282 I
e Dinomys_branickii.DinBra_scaffold_1996                   156356 54 +    228994 I
e Erinaceus_europaeus.JH835290.1                         11530833 462 +  16010500 I
e Chaetophractus_vellerosus.ChaVel_scaffold_1070855          1230 0 -      1715 I
e Aplodontia_rufa.AprRuf_scaffold_156013                     2576 0 +      5067 C
e Oryctolagus_cuniculus.CM000803.1                      141874375 0 + 163896628 C
e Ochotona_princeps.JH802095.1                            4994749 0 -  23139505 C
e Lepus_americanus.LepAme_scaffold_62849                    11717 0 +     22452 C
e Perognathus_longimembris.PerPac_flattened_line_22291      42371 1 -     45160 I
e Dipodomys_stephensi.DipSte_scaffold_44365                 26568 1 +     28912 I
e Dipodomys_ordii.KN672545.1                              3654932 1 +   4240102 I
e Suricata_suricatta.SurSur_flattened_line_20339            25319 430 +     62062 I
e Ziphius_cavirostris.ZipCav_flattened_line_127025           5301 442 -      8775 I
e Zalophus_californianus.ZalCal_flattened_line_4097        212018 448 -    227762 I
e Vulpes_lagopus.VulLag_flattened_line_2045                135489 449 -    281493 I
e Vicugna_pacos.KN269600.1                                1523037 433 -   2331223 I
e Ursus_maritimus.KK498671.1                              6512543 460 +  28682327 I
e Uropsilus_gracilis.UroGra_scaffold_4143_0                 24925 0 -     25548 I
e Tursiops_truncatus.MRVK01000923.1                      69311805 441 -  96451834 I
e Trichechus_manatus.JH594618.1                          16079679 1700 +  31416278 I
e Tragulus_javanicus.TraJav_scaffold_14717                   3584 419 +     90398 I
e Tonatia_saurophila.TonSau_scaffold_3334                  134241 421 -    259118 I
e Tolypeutes_matacus.TolMat_scaffold_269431                  1990 2406 +      6782 I
e Tapirus_terrestris.TapTer_scaffold_14939                  55756 434 +     99546 I
e Tapirus_indicus.TapInd_scaffold_176                      805095 435 +   1148477 I
e Tamandua_tetradactyla.TamTet_scaffold_26877               13106 433 +     45698 I
e Tadarida_brasiliensis.TadBra_scaffold_145589               4174 407 -      6213 I
e Sus_scrofa.CM000824.4                                 189270228 447 + 218635234 I
e Spilogale_gracilis.SpiGra_flattened_line_905             232751 445 -    276980 I
e Solenodon_paradoxus.SolPar_flattened_line_1012            16376 416 +    739146 I
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   29737 434 -    114521 I
e Saiga_tatarica.SaiTat_scaffold_82192                       5983 428 +     12214 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                17647 435 +    109198 I
e Rhinolophus_sinicus.LVEH01000179.1                      1786172 430 +   2252614 I
e Rangifer_tarandus.RanTarSib_scaffold_24239                14178 431 +     68503 I
e Puma_concolor.QAVW01000427.1                          131532079 431 - 161321710 I
e Pteropus_vampyrus.KN525959.1                             602305 437 -   3946241 I
e Pteropus_alecto.KB031157.1                             13244354 438 -  17261082 I
e Pteronura_brasiliensis.PteBra_flattened_line_1343        243991 454 -    344369 I
e Pteronotus_parnellii.KE867983.1                            2230 422 -     27784 I
e Procavia_capensis.ProCapCap_scaffold_15315                74302 1939 +     78963 I
e Platanista_gangetica.PlaMin_flattened_line_72990           3771 443 +     21690 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            95224 410 +    112873 I
e Phocoena_phocoena.PhoPho_flattened_line_11948            119703 443 -    122454 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113416 447 -    135482 I
e Pantholops_hodgsonii.KE114631.1                         1064538 417 -   1292953 I
e Panthera_tigris.KE721879.1                              5025497 431 -   6340057 I
e Panthera_pardus.KV860323.1                              3635849 432 +  18214204 I
e Panthera_onca.PanOnc_flattened_line_1615                  32116 431 +    295523 I
e Ovis_canadensis.OviCan_scaffold_6251                      76891 417 +    140051 I
e Ovis_aries.CM001582.2                                 134075677 417 - 275406953 I
e Otocyon_megalotis.JAEUCK010005121.1                      305421 444 -    505867 I
e Orycteropus_afer.OryAfe_flattened_line_13509              41471 1764 -     66828 I
e Orcinus_orca.KB316965.1                                 7223086 443 -   7562323 I
e Okapia_johnstoni.LVCL01S0017931.1                         35255 573 +     78940 I
e Odocoileus_virginianus.KZ101650.1                       1078100 432 +   1425656 I
e Odobenus_rosmarus.KB229369.1                             677288 443 -   3126709 I
e Nyctereutes_procyonoides.CAJHUB010000786.1                28082 449 +   3668941 I
e Noctilio_leporinus.NocLep_scaffold_12062                  47676 415 +     94413 I
e Neophocaena_asiaeorientalis.KZ688543.1                  3949402 443 -   4490290 I
e Neomonachus_schauinslandi.NINY01007774.1                4482632 454 -  14209539 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3432 432 -      8794 I
e Myotis_myotis.MyoMyo_scaffold_6123                         8554 416 +     66751 I
e Myotis_lucifugus.GL429887.1                             3463359 417 -   3747815 I
e Myotis_davidii.KB114863.1                               5017463 416 +   6462685 I
e Myotis_brandtii.KE161952.1                               965772 418 +   8389877 I
e Mustela_putorius.JH417978.1                             4421898 453 -  28371801 I
e Murina_feae.MurFea_scaffold_2254                          17451 414 -    100666 I
e Mungos_mungo.MunMun_flattened_line_8729                  142653 430 -    168139 I
e Moschus_moschiferus.MosMos_scaffold_146101                 2972 432 -      4346 I
e Mormoops_blainvillei.MorMeg_scaffold_2952                159560 424 +    265003 I
e Monodon_monoceros.MonMon_M_scaffold_5598                 144790 442 +    154973 I
e Mirounga_angustirostris.MirAng_flattened_line_8852         9033 661 -    104932 I
e Miniopterus_schreibersii.MinSch_scaffold_24116            32480 421 +     45743 I
e Miniopterus_natalensis.LDJU01000022.1                   8207809 420 +  10048721 I
e Micronycteris_hirsuta.MicHir_scaffold_37978               21050 428 -     32043 I
e Microgale_talazaci.MicTal_scaffold_34660                  29351 1133 -     48017 I
e Mellivora_capensis.MelCap_flattened_line_146202             327 452 -      1999 I
e Megaderma_lyra.MegLyr_scaffold_3562                       62628 576 -    234502 I
e Manis_pentadactyla.KN017078.1                             34538 441 +     58827 I
e Manis_javanica.JSZB01003966.1                            144466 438 +    252755 I
e Lycaon_pictus.CM007556.1                               11085089 449 +  39895028 I
e Loxodonta_africana.GL010040.1                          20589215 1702 -  62548349 I
e Lipotes_vexillifer.KE558548.1                            134353 444 +   3060487 I
e Leptonychotes_weddellii.KB714749.1                      3083728 458 -   3498232 I
e Lasiurus_borealis.LasBor_scaffold_5102                   111937 417 -    115756 I
e Kogia_breviceps.KogBre_flattened_line_35920               22021 443 +     37189 I
e Inia_geoffrensis.IniGeo_flattened_line_66725               7195 437 +     17520 I
e Hyaena_hyaena.HyaHya_flattened_line_20729                 14013 474 -     67322 I
e Hipposideros_galeritus.HipGal_scaffold_104691              5946 409 -      9143 I
e Hipposideros_armiger.JXIK01001085.1                      276788 408 -    477199 I
e Hippopotamus_amphibius.HipAmp_scaffold_1308              145449 430 +    277961 I
e Heterohyrax_brucei.HetBruBak_scaffold_25354               54438 1939 +     73687 I
e Hemitragus_hylocrius.HemHyl_scaffold_16669                25884 416 -     91191 I
e Helogale_parvula.HelPar_flattened_line_22962              14960 432 +     53719 I
e Giraffa_tippelskirchi.LVKQ01S012154.1                    179385 717 -    189561 I
e Felis_nigripes.FelNig_flattened_line_8080                 18925 427 +     52776 I
e Felis_catus_fca126.CM031420.1                         129277790 427 - 158578461 I
e Eubalaena_japonica.EubJap_flattened_line_7756             59838 466 +     89355 I
e Eschrichtius_robustus.EscRob_flattened_line_685          313408 442 +    330699 I
e Equus_przewalskii.ATBW01073585.1                          11036 704 +     92910 I
e Equus_caballus.CM000402.2                              13349546 704 +  41866177 I
e Equus_asinus.JREZ01000062.1                             5851044 703 -   7175178 I
e Enhydra_lutris.KZ291749.1                              85869516 453 +  99434291 I
e Elephantulus_edwardii.JH947210.1                        7804622 10712 +  15467074 I
e Elaphurus_davidianus.JRFZ01086400.1                     1489870 432 +   1727528 I
e Eidolon_helvum.KE772537.1                                 10556 435 +     24177 I
e Echinops_telfairi.JH980316.1                           22994071 0 -  44670279 C
e Diceros_bicornis.DicBicMic_scaffold_9545                    953 1024 +    151128 I
e Dicerorhinus_sumatrensis.PEKH010003161.1                 320309 1016 +    993696 I
e Desmodus_rotundus.KZ672188.1                           18697183 419 -  18957592 I
e Delphinapterus_leucas.KZ290064.1                       80035206 438 -  96802777 I
e Dasypus_novemcinctus.JH568778.1                          180040 2424 -   6883506 I
e Cryptoprocta_ferox.CryFer_flattened_line_19014            49751 433 -     70449 I
e Crocidura_indochinensis.CroInd_scaffold_38409             18067 408 -     19186 I
e Craseonycteris_thonglongyai.CraTho_scaffold_22679         37588 826 -     40477 I
e Condylura_cristata.JH655880.1                          60611131 297 +  78930452 I
e Choloepus_hoffmanni.KN194586.1                           760141 439 +    964067 I
e Choloepus_didactylus.ChoDid_scaffold_36182                14830 439 -     21363 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_160623         1406 1024 -      9338 I
e Catagonus_wagneri.CatWag_scaffold_1305                   157166 412 -    276539 I
e Carollia_perspicillata.CarPer_scaffold_4436               57873 420 +     67245 I
e Capra_hircus.CM004562.1                               135704839 417 - 157403528 I
e Capra_aegagrus.CM003214.1                              21323612 417 + 157394656 I
e Canis_lupus_orion.HG994411.1                           16452657 449 -  44759192 I
e Canis_lupus_familiaris.chr31                           11085633 449 +  39895921 I
e Canis_lupus_dingo.QKWQ01001993.1                       11263104 449 -  35597290 I
e Canis_lupus_VD.CanFam_VD_scaffold_16982                   11461 449 +     87036 I
e CanFam4.chr31                                          11516443 449 +  39901454 I
e Camelus_ferus.KB016973.1                                2971365 436 +   6889770 I
e Camelus_dromedarius.KN271192.1                           395631 437 -  15254737 I
e Camelus_bactrianus.KN276303.1                           3217927 436 -   8989139 I
e Bubalus_bubalis.KI419065.1                              1229342 431 -   1914593 I
e Bos_taurus.CM000177.6                                 136293586 432 - 158972876 I
e Bos_mutus.JH883513.1                                     570227 432 -    998990 I
e Bos_indicus.CM003021.1                                138137853 432 - 161108492 I
e Bison_bison.KN264915.1                                  6557614 432 +   6870073 I
e Beatragus_hunteri.BeaHun_scaffold_21644                   41603 412 -     72089 I
e Balaenoptera_bonaerensis.DF502048.1                        3753 444 -     13118 I
e Balaenoptera_acutorostrata.KI537095.1                  26378522 443 +  51448160 I
e Artibeus_jamaicensis.ArtJam_scaffold_41619                 7075 421 -     29036 I
e Antilocapra_americana.AntAmePen_scaffold_42841            29107 427 +     33004 I
e Anoura_caudifer.AnoCau_scaffold_422                      388679 416 -    631301 I
e Ammotragus_lervia.NIVO01013474.1                        3518508 445 +   4113121 I
e Ailurus_fulgens.LNAC01000003.1                          7091784 657 -  16596857 I
e Ailuropoda_melanoleuca.LNAT01000321.1                  10655057 459 +  23371972 I
e Acinonyx_jubatus.LLWD01000356.1                         2031739 430 +   3721120 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           17738 0 -    119109 C
e Glis_glis.GliGli_scaffold_79770                           11388 3 -     18683 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     13979 0 -     20485 C
e Jaculus_jaculus.JH725517.1                              8564406 0 +  11848649 C
e Hylobates_pileatus_b.ContigUN                                 14622428 998 -  25970782 I
e Allactaga_bullata.AllBul_scaffold_70162                   11663 0 -     22067 C
e Hylobates_muelleri.k141_1389047                             677 110 -      2977 I
e Hylobates_klossii.k141_466549                             10316 4 +     11537 I
e Hylobates_agilis.k141_624065                                740 0 +      2112 C
e Hylobates_abbotti.k141_493872                              3876 110 +      5897 I
e Galeopterus_variegatus.GalVar_scaffold_354               155011 0 +    324696 C
e Microtus_ochrogaster.CM001673.1                        22818586 0 -  98408828 C
e Xerus_inauris.XerIna_scaffold_7898                       125751 0 -    134049 C
e Varecia_variegata.k141_775891                             23550 0 -     33872 C
e Varecia_rubra.k141_432109                                  4009 0 -     20643 C
e Tupaia_tana.TupTan_flattened_line_68454                    3810 0 +     13056 C
e Tupaia_chinensis.KB320831.1                             2791553 0 -   3938065 C
e Trachypithecus_pileatus.k141_1022309                       1216 0 +     13828 C
e Trachypithecus_phayrei.ctg3                            44658913 0 -  44834318 C
e Trachypithecus_obscurus.k141_1115109                       4113 0 -     28054 C
e Trachypithecus_melamera.k141_238507                       13641 0 +     14732 C
e Trachypithecus_leucocephalus.k141_283605                  50460 0 +     51589 C
e Trachypithecus_laotum.k141_760702                           708 0 +     14371 C
e Trachypithecus_hatinhensis.k141_504423                     2051 0 -     15592 C
e Trachypithecus_germaini.k141_878600                         903 0 +      1165 C
e Trachypithecus_geei.k141_670367                           42073 0 -     54611 C
e Trachypithecus_francoisi.k141_768164                        675 0 -     14244 C
e Trachypithecus_cristatus.k141_1011511                       740 0 -     12939 C
e Trachypithecus_crepusculus.k141_1588528                   19353 0 -     32910 C
e Trachypithecus_auratus.k141_738098                        25626 0 +     38948 C
e Theropithecus_gelada.CM009951.1                       194006524 0 - 194193292 C
e Tarsius_wallacei.k141_48636                               58530 0 +     65473 C
e Tarsius_lariang.k141_609102                               25214 0 +     42269 C
e Spermophilus_dauricus.KZ294190.1                        2238651 0 +   2842873 C
e Sigmodon_hispidus.SigHis_scaffold_11332                   98375 0 -    120886 C
e Semnopithecus_vetulus.k141_1143185                        12463 0 +     30600 C
e Semnopithecus_schistaceus.k141_387461                     29419 0 +     42640 C
e Semnopithecus_priam.k141_410937                           36305 0 +     46263 C
e Semnopithecus_johnii.k141_785014                         117514 0 +    130994 C
e Semnopithecus_hypoleucos.k141_761524                       7516 0 +     20762 C
e Semnopithecus_entellus.k141_1572367                        2119 0 +     15331 C
e Rhinopithecus_strykeri.ctg4                            44855292 0 -  45163003 C
e Rhinopithecus_roxellana.NC_044549.1                   206376392 0 - 206558726 C
e Rhinopithecus_bieti.k119_1391695                            735 0 -      1866 C
e Rattus_norvegicus.chr11                                13914110 0 +  90463843 C
e Pygathrix_nigripes_a.k141_101123                             4507 0 +     18040 C
e Pygathrix_nigripes_b.ctg79                                 6805113 0 +   6970761 C
e Pygathrix_cinerea.k141_374971                             28622 0 +     56732 C
e Psammomys_obesus.NESX01026517.1                           32081 0 +     77221 C
e Propithecus_verreauxi.k141_158021                         37905 0 -     48185 C
e Propithecus_tattersalli.k141_907138                       15633 0 -     53241 C
e Propithecus_perrieri.k141_7554                            15997 0 +     27322 C
e Propithecus_edwardsi.k141_1317105                         34077 0 -     44753 C
e Propithecus_diadema.k141_577245                           41687 0 +     52369 C
e Propithecus_coronatus.k141_1353159                         2352 0 +     11805 C
e Propithecus_coquerelli.NW_012147997.1                    666524 0 -   2312742 C
e Prolemur_simus.MPIZ01000048.1                           6847302 0 +  12164890 C
e Presbytis_mitrata.k141_860013                              4638 0 +     14865 C
e Presbytis_comata.k141_672698                               4504 0 -     15069 C
e Plecturocebus_cinerascens.k141_744510                     21660 0 +    147771 C
e Piliocolobus_tephrosceles.PDMG02000036.1               26739247 0 +  26888534 C
e Piliocolobus_kirkii.k141_929665                             769 0 +      7694 C
e Piliocolobus_gordonorum.k141_1270531                       1402 0 -     17985 C
e Piliocolobus_badius.k141_1987485                            783 0 -      5908 C
e Peromyscus_maniculatus.KI615518.1                       4948796 1 -   8017169 I
e Perodicticus_potto.k141_713187                            23106 0 -     27972 C
e Perodicticus_ibeanus.k141_117958                           3808 0 -     23713 C
e Papio_ursinus.k141_1345919                                  756 0 -      7628 C
e Papio_papio.k141_979496                                    4895 0 +     14967 C
e Papio_kindae.k141_5458022                                 66363 0 -    104429 C
e Papio_hamadryas.Contig15                               47512385 0 +  47705337 C
e Papio_cynocephalus.k141_883042                             3314 0 +      5367 C
e Papio_anubis.CM001492.2                               188154997 0 - 188283584 C
e Otolemur_garnettii.GL873528.1                          18007194 0 -  38779656 C
e Otolemur_crassicaudatus.k141_321880                       37766 0 +     38679 C
e Onychomys_torridus.OnyTor_scaffold_12578                  35605 0 +     62360 C
e Ondatra_zibethicus.OndZib_scaffold_6821                  123834 0 +    145789 C
e Octodon_degus.JH651621.1                                3684297 0 +  10294119 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65668213 0 +  89412551 C
e Nycticebus_coucang.k141_2051882                            2604 0 +      6470 C
e Nycticebus_bengalensis.LG16                            65565875 0 -  95554990 C
e Nasalis_larvatus.k141_153429                               7260 0 +     48152 C
e Nannospalax_galili.KL201303.1                            116888 0 +    362372 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     88760 0 -    117718 C
e Muscardinus_avellanarius.MusAve_scaffold_9643              9863 3 +     98495 I
e Mus_spretus.CM004110.1                                 74329283 0 +  97876770 C
e Mus_pahari.LT608305.1                                  67554345 0 +  89017189 C
e Mus_musculus.chr16                                     75488104 0 +  98207768 C
e Mus_caroli.LT608236.1                                  70765067 0 +  92629107 C
e Mirza_zaza.k141_226143                                     4326 0 +      8497 C
e Miopithecus_ogouensis.k141_2935907                          759 0 +     29742 C
e Microcebus_murinus.CM007691.1                          16508927 0 +  47401472 C
e Mesocricetus_auratus.KB708139.1                         1045466 0 -  26018355 C
e Meriones_unguiculatus.MerUng_scaffold_52233               10531 0 +     15977 C
e Marmota_marmota.CZRN01000005.1                         36872570 0 +  64221397 C
e Mandrillus_sphinx.Contig144                             4449032 0 -   4543643 C
e Mandrillus_leucophaeus.scaffold125                     43436206 0 -  43563597 C
e Macaca_tonkeana.k141_2870633                               3102 0 -     27140 C
e Macaca_thibetana.k99_662710                               15798 0 -     24607 C
e Macaca_silenus.Contig12                                43839548 0 +  43892939 C
e Macaca_siberu.k141_741907                                 14511 0 -     55006 C
e Macaca_radiata.k141_3680256                                 769 0 -     13212 C
e Macaca_nigra.k141_282495                                   3097 0 -     46448 C
e Macaca_nemestrina.KQ004885.1                           11444425 0 +  11645122 C
e Macaca_mulatta.NC_041755.1                            196034320 0 + 196197964 C
e Macaca_maura.k141_251854                                  44150 0 -     79256 C
e Macaca_leonina.k141_467472                                  913 0 -      7381 C
e Macaca_fuscata.k119_599327                                  405 0 -      2568 C
e Macaca_fascicularis.k141_155037                           45639 0 +     63263 C
e Macaca_cyclopis.k119_893486                                 888 0 -      3136 C
e Macaca_assamensis.Contig65                             12705243 0 +  12821369 C
e Macaca_arctoides.k141_2201161                             18722 0 +     74745 C
e Loris_tardigradus.ctg97                                 3777183 0 +   6799190 C
e Loris_lydekkerianus.k141_550999                            9434 0 +     84689 C
e Lophocebus_aterrimus.ctg55                             19247047 0 +  19376315 C
e Lepilemur_septentrionalis.k141_578524                     30323 0 -     33031 C
e Lepilemur_ruficaudatus.k141_617879                        77309 0 +    116806 C
e Lepilemur_dorsalis.k141_134267                            52059 0 +     63517 C
e Lepilemur_ankaranensis.k141_884009                        22684 0 +     39228 C
e Lemur_catta.scaffold_1                                258405921 0 - 285822530 C
e Indri_indri.k141_4418183                                    184 0 -      1457 C
e Ictidomys_tridecemlineatus.JH393315.1                   7124731 0 +  13083262 C
e Hystrix_cristata.HysCri_scaffold_50788                     4887 0 +     22540 C
e Heterocephalus_glaber.JH602058.1                        2549833 0 +  31725842 C
e Hapalemur_occidentalis.k141_797938                        44239 0 -     54384 C
e Hapalemur_meridionalis.k141_186231                        27641 0 -     42470 C
e Hapalemur_griseus.k141_1387522                             4365 0 +     56096 C
e Hapalemur_gilberti.k141_1254239                            8736 0 +      9690 C
e Hapalemur_alaotrensis.k141_1280836                          586 0 +     10286 C
e Graphiurus_murinus.GraMur_scaffold_4493                   76135 27 +    118900 I
e Galagoides_demidoff.k141_1769638                           9118 0 +     27357 C
e Galago_senegalensis.k141_964197                           12049 0 -     43889 C
e Galago_moholi.ctg555                                     209670 0 -    847004 C
e Fukomys_damarensis.KN123630.1                          13891437 0 -  19261668 C
e Eulemur_sanfordi.k141_186399                              14538 0 -     29447 C
e Eulemur_rufus.k141_1620292                                31816 0 +     46535 C
e Eulemur_rubriventer.k141_411740                           17083 0 +     26808 C
e Eulemur_mongoz.k141_825972                                14624 0 +     27497 C
e Eulemur_macaco.k141_1341545                               14351 0 +     16540 C
e Eulemur_fulvus.k141_653297                                 9972 0 +    109717 C
e Eulemur_flavifrons.k141_903901                             6489 0 +     60246 C
e Eulemur_coronatus.k141_3240342                            10173 0 +     36558 C
e Eulemur_collaris.k141_311830                               3697 0 -      6809 C
e Eulemur_albifrons.k141_715837                              3764 0 +     13586 C
e Erythrocebus_patas.Contig8                             48769982 0 -  48907691 C
e Ellobius_talpinus.LOJH01090055.1                           5396 0 -      7838 C
e Ellobius_lutescens.LOEQ01003611.1                        238324 20 -    369425 I
e Dolichotis_patagonum.DolPat_scaffold_14102                34836 0 -     73477 C
e Daubentonia_madagascariensis.ctg11                     16843569 0 +  31942871 C
e Dasyprocta_punctata.DasPun_flattened_line_634             57587 0 -    236241 C
e Cuniculus_paca.CunPac_flattened_line_16637                16497 0 +     26546 C
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 29465 0 -     67205 C
e Ctenodactylus_gundi.CteGun_scaffold_447                  206904 0 -    956709 C
e Cricetulus_griseus.LT883672.1                          53027728 0 +  72327488 C
e Cricetomys_gambianus.CriGam_scaffold_949                 277041 0 -    399297 C
e Colobus_polykomos.k141_1406057                            15325 0 +     23629 C
e Colobus_guereza.LG08                                  147663341 0 + 156195979 C
e Colobus_angolensis.KN985967.1                          10885177 0 +  10971483 C
e Chlorocebus_sabaeus.CM001963.2                        101143412 0 + 101219884 C
e Chlorocebus_pygerythrus.k141_1486215                      32849 0 -     53260 C
e Chlorocebus_aethiops.ctg22                             15137802 0 -  15256731 C
e Chinchilla_lanigera.JH721867.1                         15960487 0 +  43084221 C
e Cheirogaleus_medius.k141_133808                            6760 0 +     13308 C
e Cheirogaleus_major.k141_1157592                           57717 0 -     68416 C
e Cercopithecus_roloway.k141_2263608                        20248 0 +     37128 C
e Cercopithecus_pogonias.k141_3109732                         639 0 -     17744 C
e Cercopithecus_petaurista.k141_64532                         661 0 -     25661 C
e Cercopithecus_nictitans.k141_1129315                        888 0 +     35577 C
e Cercopithecus_neglectus.k141_2078027                      39879 0 -     45581 C
e Cercopithecus_mona.ctg12                               46476328 0 +  46592721 C
e Cercopithecus_albogularis.ctg51                              11989573 0 +  12117833 C
e Cercopithecus_lowei.k141_623764                           23042 0 +     35983 C
e Cercopithecus_hamlyni.k141_129805                           884 0 +     16677 C
e Cercopithecus_diana.k141_2980617                          57183 0 -     59240 C
e Cercopithecus_cephus.k141_598190                          28340 0 +     30494 C
e Cercopithecus_ascanius.k141_4123525                         842 0 -     17608 C
e Cercocebus_torquatus.k141_3969582                         57950 0 -    107033 C
e Cercocebus_lunulatus.k141_4634644                           640 0 -     21101 C
e Cercocebus_chrysogaster.k141_2328246                      25435 0 +     60454 C
e Cercocebus_atys.KQ010443.1                              6553958 0 +   6739814 C
e Cephalopachus_bancanus.k141_702587                         6764 0 +     21754 C
e Cavia_tschudii.CavTsc_scaffold_488                       175468 0 +    436027 C
e Cavia_porcellus.DS562889.1                             15797277 0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15785343 0 -  24422027 C
e Castor_canadensis.CasCan_scaffold_47037                   29421 0 +     33760 C
e Carlito_syrichta.NW_007248099.1                          307731 0 +    345090 C
e Capromys_pilorides.CapPil_scaffold_979108                   696 0 -      1248 C
e Avahi_peyrierasi.k141_2689020                              1742 0 +      2719 C
e Avahi_laniger.k141_2840928                                 5422 0 -     16375 C
e Arctocebus_calabarensis.k141_1161114                      16581 0 +     17483 C
e Allochrocebus_solatus.k141_371672                           636 0 -     80423 C
e Allochrocebus_preussi.k141_21674                            959 0 -      1421 C
e Allochrocebus_lhoesti.k141_3566948                          742 0 -     29318 C
e Allenopithecus_nigroviridis.k141_3103728                   1266 0 +      1665 C
e Acomys_cahirinus.AcoCah_scaffold_1625                    111076 0 -    189883 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               10664 3 +    209709 GTT
s Allenopithecus_nigroviridis.k141_3103728                   1266 3 +      1665 GTT
i Allenopithecus_nigroviridis.k141_3103728              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                          742 3 -     29318 gtt
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_21674                            959 3 -      1421 gtt
i Allochrocebus_preussi.k141_21674                      C 0 I 108
s Allochrocebus_solatus.k141_371672                           636 3 -     80423 gtt
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Cercocebus_atys.KQ010443.1                              6553958 3 +   6739814 gtt
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      25435 3 +     60454 GTT
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                           640 3 -     21101 GTT
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         57950 3 -    107033 GTT
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                         842 3 -     17608 gtt
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          28340 3 +     30494 GTT
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          57183 3 -     59240 gtt
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                           884 3 +     16677 GTT
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           23042 3 +     35983 GTT
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11989573 3 +  12117833 GTT
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46476328 3 +  46592721 GTT
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      39879 3 -     45581 gtt
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                        888 3 +     35577 GTT
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                         661 3 -     25661 gtt
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                         639 3 -     17744 gtt
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        20248 3 +     37128 GTT
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chlorocebus_aethiops.ctg22                             15137802 3 -  15256731 gtt
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      32849 3 -     53260 gtt
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101143412 3 + 101219884 gtt
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10885177 3 +  10971483 gtt
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147663341 3 + 156195979 gtt
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            15325 3 +     23629 gtt
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Erythrocebus_patas.Contig8                             48769982 3 -  48907691 gtt
i Erythrocebus_patas.Contig8                            C 0 C 0
s Gorilla_beringei.k141_111300                               4049 3 -     14630 gtt
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119651148 3 - 195582420 gtt
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Hoolock_leuconedys.ctg79                                      3454 3 -   7690867 gtt
i Hoolock_leuconedys.ctg79                                 I 5 I 50
s Hylobates_abbotti.k141_866183                               717 3 -      1027 GTT
i Hylobates_abbotti.k141_866183                         I 14 C 0
s Hylobates_agilis.k141_624065                                740 2 +      2112 -TT
i Hylobates_agilis.k141_624065                          C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14623426 1 -  25970782 g--
i Hylobates_pileatus_b.ContigUN                                I 998 C 0
s Hylobates_muelleri.k141_1002428                             681 3 +      1029 GTT
i Hylobates_muelleri.k141_1002428                       I 14 C 0
s Lophocebus_aterrimus.ctg55                             19247047 3 +  19376315 GTT
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Macaca_arctoides.k141_2201161                             18722 3 +     74745 GTT
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12705243 3 +  12821369 GTT
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                 888 3 -      3136 gtt
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           45639 3 +     63263 GTT
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                  405 3 -      2568 gtt
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                  913 3 -      7381 gtt
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  44150 3 -     79256 gtt
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196034320 3 + 196197964 gtt
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11444425 3 +  11645122 gtt
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   3097 3 -     46448 gtt
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                 769 3 -     13212 gtt
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 14511 3 -     55006 gtt
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43839548 3 +  43892939 GTT
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               15798 3 -     24607 gtt
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               3102 3 -     27140 gtt
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43436206 3 -  43563597 GTT
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4449032 3 -   4543643 gtt
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Miopithecus_ogouensis.k141_2935907                          759 3 +     29742 GTT
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Nasalis_larvatus.k141_153429                               7260 3 +     48152 GTT
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Nomascus_annamensis.k141_302224                             724 3 +      1516 GTT
i Nomascus_annamensis.k141_302224                       I 5 C 0
s Nomascus_concolor.k141_49591                               1850 3 +      2014 GTT
i Nomascus_concolor.k141_49591                          I 5 C 0
s Nomascus_siki_b.tarseq_80                             23685 3 -  18771707 gtt
i Nomascus_siki_b.tarseq_80                         I 5 I 458
s Nomascus_siki_a.k141_595747                                  1398 3 +      4512 GTT
i Nomascus_siki_a.k141_595747                             I 5 C 0
s Pan_paniscus.CM003386.1                               127573402 3 - 205426864 ggt
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.KZ622857.1                               326390 3 +    772158 gtt
i Pan_troglodytes.KZ622857.1                            I 4 I 169
s Papio_anubis.CM001492.2                               188154997 3 - 188283584 gtt
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             3314 3 +      5367 GTT
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47512385 3 +  47705337 GTT
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 66363 3 -    104429 GTT
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    4895 3 +     14967 GTT
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                  756 3 -      7628 GTT
i Papio_ursinus.k141_1345919                            C 0 C 0
s Piliocolobus_badius.k141_1987485                            783 3 -      5908 gtt
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       1402 3 -     17985 gtt
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                             769 3 +      7694 GTT
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26739247 3 +  26888534 gtt
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pongo_abelii.NDHI03003816.1                              185934 3 -    373494 gtt
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19806582 3 +  19899266 gtt
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               4504 3 -     15069 gtt
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              4638 3 +     14865 GTT
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Pygathrix_cinerea.k141_374971                             28622 3 +     56732 GTT
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6805113 3 +   6970761 GTT
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             4507 3 +     18040 GTT
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rhinopithecus_bieti.k119_1391695                            735 3 -      1866 gtt
i Rhinopithecus_bieti.k119_1391695                      C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206376392 3 - 206558726 gtt
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44855292 3 -  45163003 gtt
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Semnopithecus_entellus.k141_1572367                        2119 3 +     15331 gtt
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       7516 3 +     20762 gtt
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         117514 3 +    130994 gtt
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           36305 3 +     46263 gtt
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     29419 3 +     42640 gtt
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        12463 3 +     30600 gtt
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        13677 3 -  13920577 GTT
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Theropithecus_gelada.CM009951.1                       194006524 3 - 194193292 gtt
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Trachypithecus_auratus.k141_738098                        25626 3 +     38948 gtt
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   19353 3 -     32910 gtt
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                       740 3 -     12939 gtt
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                        675 3 -     14244 gtt
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           42073 3 -     54611 gtt
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_878600                         903 3 +      1165 gtt
i Trachypithecus_germaini.k141_878600                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     2051 3 -     15592 gtt
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                           708 3 +     14371 gtt
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  50460 3 +     51589 gtt
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       13641 3 +     14732 gtt
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       4113 3 -     28054 gtt
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44658913 3 -  44834318 gtt
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       1216 3 +     13828 gtt
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
e Eptesicus_fuscus.JH977687.1                             4702143 415 +   6522550 I
e Macroglossus_sobrinus.MacSob_scaffold_879                699974 431 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             38042 0 -     47444 C
e Petromus_typicus.PetTyp_scaffold_33007                    10982 0 -     36578 C
e Sorex_araneus.JH798170.1                               17748590 843 -  27805282 I
e Dinomys_branickii.DinBra_scaffold_1996                   156356 54 +    228994 I
e Erinaceus_europaeus.JH835290.1                         11530833 462 +  16010500 I
e Chaetophractus_vellerosus.ChaVel_scaffold_1070855          1230 0 -      1715 I
e Aplodontia_rufa.AprRuf_scaffold_156013                     2576 0 +      5067 C
e Oryctolagus_cuniculus.CM000803.1                      141874375 0 + 163896628 C
e Ochotona_princeps.JH802095.1                            4994749 0 -  23139505 C
e Lepus_americanus.LepAme_scaffold_62849                    11717 0 +     22452 C
e Perognathus_longimembris.PerPac_flattened_line_22291      42371 1 -     45160 I
e Dipodomys_stephensi.DipSte_scaffold_44365                 26568 1 +     28912 I
e Dipodomys_ordii.KN672545.1                              3654932 1 +   4240102 I
e Suricata_suricatta.SurSur_flattened_line_20339            25319 430 +     62062 I
e Ziphius_cavirostris.ZipCav_flattened_line_127025           5301 442 -      8775 I
e Zalophus_californianus.ZalCal_flattened_line_4097        212018 448 -    227762 I
e Vulpes_lagopus.VulLag_flattened_line_2045                135489 449 -    281493 I
e Vicugna_pacos.KN269600.1                                1523037 433 -   2331223 I
e Ursus_maritimus.KK498671.1                              6512543 460 +  28682327 I
e Uropsilus_gracilis.UroGra_scaffold_4143_0                 24925 0 -     25548 I
e Tursiops_truncatus.MRVK01000923.1                      69311805 441 -  96451834 I
e Trichechus_manatus.JH594618.1                          16079679 1700 +  31416278 I
e Tragulus_javanicus.TraJav_scaffold_14717                   3584 419 +     90398 I
e Tonatia_saurophila.TonSau_scaffold_3334                  134241 421 -    259118 I
e Tolypeutes_matacus.TolMat_scaffold_269431                  1990 2406 +      6782 I
e Tapirus_terrestris.TapTer_scaffold_14939                  55756 434 +     99546 I
e Tapirus_indicus.TapInd_scaffold_176                      805095 435 +   1148477 I
e Tamandua_tetradactyla.TamTet_scaffold_26877               13106 433 +     45698 I
e Tadarida_brasiliensis.TadBra_scaffold_145589               4174 407 -      6213 I
e Sus_scrofa.CM000824.4                                 189270228 447 + 218635234 I
e Spilogale_gracilis.SpiGra_flattened_line_905             232751 445 -    276980 I
e Solenodon_paradoxus.SolPar_flattened_line_1012            16376 416 +    739146 I
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   29737 434 -    114521 I
e Saiga_tatarica.SaiTat_scaffold_82192                       5983 428 +     12214 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                17647 435 +    109198 I
e Rhinolophus_sinicus.LVEH01000179.1                      1786172 430 +   2252614 I
e Rangifer_tarandus.RanTarSib_scaffold_24239                14178 431 +     68503 I
e Puma_concolor.QAVW01000427.1                          131532079 431 - 161321710 I
e Pteropus_vampyrus.KN525959.1                             602305 437 -   3946241 I
e Pteropus_alecto.KB031157.1                             13244354 438 -  17261082 I
e Pteronura_brasiliensis.PteBra_flattened_line_1343        243991 454 -    344369 I
e Pteronotus_parnellii.KE867983.1                            2230 422 -     27784 I
e Procavia_capensis.ProCapCap_scaffold_15315                74302 1939 +     78963 I
e Platanista_gangetica.PlaMin_flattened_line_72990           3771 443 +     21690 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            95224 410 +    112873 I
e Phocoena_phocoena.PhoPho_flattened_line_11948            119703 443 -    122454 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113416 447 -    135482 I
e Pantholops_hodgsonii.KE114631.1                         1064538 417 -   1292953 I
e Panthera_tigris.KE721879.1                              5025497 431 -   6340057 I
e Panthera_pardus.KV860323.1                              3635849 432 +  18214204 I
e Panthera_onca.PanOnc_flattened_line_1615                  32116 431 +    295523 I
e Ovis_canadensis.OviCan_scaffold_6251                      76891 417 +    140051 I
e Ovis_aries.CM001582.2                                 134075677 417 - 275406953 I
e Otocyon_megalotis.JAEUCK010005121.1                      305421 444 -    505867 I
e Orycteropus_afer.OryAfe_flattened_line_13509              41471 1764 -     66828 I
e Orcinus_orca.KB316965.1                                 7223086 443 -   7562323 I
e Okapia_johnstoni.LVCL01S0017931.1                         35255 573 +     78940 I
e Odocoileus_virginianus.KZ101650.1                       1078100 432 +   1425656 I
e Odobenus_rosmarus.KB229369.1                             677288 443 -   3126709 I
e Nyctereutes_procyonoides.CAJHUB010000786.1                28082 449 +   3668941 I
e Noctilio_leporinus.NocLep_scaffold_12062                  47676 415 +     94413 I
e Neophocaena_asiaeorientalis.KZ688543.1                  3949402 443 -   4490290 I
e Neomonachus_schauinslandi.NINY01007774.1                4482632 454 -  14209539 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3432 432 -      8794 I
e Myotis_myotis.MyoMyo_scaffold_6123                         8554 416 +     66751 I
e Myotis_lucifugus.GL429887.1                             3463359 417 -   3747815 I
e Myotis_davidii.KB114863.1                               5017463 416 +   6462685 I
e Myotis_brandtii.KE161952.1                               965772 418 +   8389877 I
e Mustela_putorius.JH417978.1                             4421898 453 -  28371801 I
e Murina_feae.MurFea_scaffold_2254                          17451 414 -    100666 I
e Mungos_mungo.MunMun_flattened_line_8729                  142653 430 -    168139 I
e Moschus_moschiferus.MosMos_scaffold_146101                 2972 432 -      4346 I
e Mormoops_blainvillei.MorMeg_scaffold_2952                159560 424 +    265003 I
e Monodon_monoceros.MonMon_M_scaffold_5598                 144790 442 +    154973 I
e Mirounga_angustirostris.MirAng_flattened_line_8852         9033 661 -    104932 I
e Miniopterus_schreibersii.MinSch_scaffold_24116            32480 421 +     45743 I
e Miniopterus_natalensis.LDJU01000022.1                   8207809 420 +  10048721 I
e Micronycteris_hirsuta.MicHir_scaffold_37978               21050 428 -     32043 I
e Microgale_talazaci.MicTal_scaffold_34660                  29351 1133 -     48017 I
e Mellivora_capensis.MelCap_flattened_line_146202             327 452 -      1999 I
e Megaderma_lyra.MegLyr_scaffold_3562                       62628 576 -    234502 I
e Manis_pentadactyla.KN017078.1                             34538 441 +     58827 I
e Manis_javanica.JSZB01003966.1                            144466 438 +    252755 I
e Lycaon_pictus.CM007556.1                               11085089 449 +  39895028 I
e Loxodonta_africana.GL010040.1                          20589215 1702 -  62548349 I
e Lipotes_vexillifer.KE558548.1                            134353 444 +   3060487 I
e Leptonychotes_weddellii.KB714749.1                      3083728 458 -   3498232 I
e Lasiurus_borealis.LasBor_scaffold_5102                   111937 417 -    115756 I
e Kogia_breviceps.KogBre_flattened_line_35920               22021 443 +     37189 I
e Inia_geoffrensis.IniGeo_flattened_line_66725               7195 437 +     17520 I
e Hyaena_hyaena.HyaHya_flattened_line_20729                 14013 474 -     67322 I
e Hipposideros_galeritus.HipGal_scaffold_104691              5946 409 -      9143 I
e Hipposideros_armiger.JXIK01001085.1                      276788 408 -    477199 I
e Hippopotamus_amphibius.HipAmp_scaffold_1308              145449 430 +    277961 I
e Heterohyrax_brucei.HetBruBak_scaffold_25354               54438 1939 +     73687 I
e Hemitragus_hylocrius.HemHyl_scaffold_16669                25884 416 -     91191 I
e Helogale_parvula.HelPar_flattened_line_22962              14960 432 +     53719 I
e Giraffa_tippelskirchi.LVKQ01S012154.1                    179385 717 -    189561 I
e Felis_nigripes.FelNig_flattened_line_8080                 18925 427 +     52776 I
e Felis_catus_fca126.CM031420.1                         129277790 427 - 158578461 I
e Eubalaena_japonica.EubJap_flattened_line_7756             59838 466 +     89355 I
e Eschrichtius_robustus.EscRob_flattened_line_685          313408 442 +    330699 I
e Equus_przewalskii.ATBW01073585.1                          11036 704 +     92910 I
e Equus_caballus.CM000402.2                              13349546 704 +  41866177 I
e Equus_asinus.JREZ01000062.1                             5851044 703 -   7175178 I
e Enhydra_lutris.KZ291749.1                              85869516 453 +  99434291 I
e Elephantulus_edwardii.JH947210.1                        7804622 10712 +  15467074 I
e Elaphurus_davidianus.JRFZ01086400.1                     1489870 432 +   1727528 I
e Eidolon_helvum.KE772537.1                                 10556 435 +     24177 I
e Echinops_telfairi.JH980316.1                           22994071 0 -  44670279 C
e Diceros_bicornis.DicBicMic_scaffold_9545                    953 1024 +    151128 I
e Dicerorhinus_sumatrensis.PEKH010003161.1                 320309 1016 +    993696 I
e Desmodus_rotundus.KZ672188.1                           18697183 419 -  18957592 I
e Delphinapterus_leucas.KZ290064.1                       80035206 438 -  96802777 I
e Dasypus_novemcinctus.JH568778.1                          180040 2424 -   6883506 I
e Cryptoprocta_ferox.CryFer_flattened_line_19014            49751 433 -     70449 I
e Crocidura_indochinensis.CroInd_scaffold_38409             18067 408 -     19186 I
e Craseonycteris_thonglongyai.CraTho_scaffold_22679         37588 826 -     40477 I
e Condylura_cristata.JH655880.1                          60611131 297 +  78930452 I
e Choloepus_hoffmanni.KN194586.1                           760141 439 +    964067 I
e Choloepus_didactylus.ChoDid_scaffold_36182                14830 439 -     21363 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_160623         1406 1024 -      9338 I
e Catagonus_wagneri.CatWag_scaffold_1305                   157166 412 -    276539 I
e Carollia_perspicillata.CarPer_scaffold_4436               57873 420 +     67245 I
e Capra_hircus.CM004562.1                               135704839 417 - 157403528 I
e Capra_aegagrus.CM003214.1                              21323612 417 + 157394656 I
e Canis_lupus_orion.HG994411.1                           16452657 449 -  44759192 I
e Canis_lupus_familiaris.chr31                           11085633 449 +  39895921 I
e Canis_lupus_dingo.QKWQ01001993.1                       11263104 449 -  35597290 I
e Canis_lupus_VD.CanFam_VD_scaffold_16982                   11461 449 +     87036 I
e CanFam4.chr31                                          11516443 449 +  39901454 I
e Camelus_ferus.KB016973.1                                2971365 436 +   6889770 I
e Camelus_dromedarius.KN271192.1                           395631 437 -  15254737 I
e Camelus_bactrianus.KN276303.1                           3217927 436 -   8989139 I
e Bubalus_bubalis.KI419065.1                              1229342 431 -   1914593 I
e Bos_taurus.CM000177.6                                 136293586 432 - 158972876 I
e Bos_mutus.JH883513.1                                     570227 432 -    998990 I
e Bos_indicus.CM003021.1                                138137853 432 - 161108492 I
e Bison_bison.KN264915.1                                  6557614 432 +   6870073 I
e Beatragus_hunteri.BeaHun_scaffold_21644                   41603 412 -     72089 I
e Balaenoptera_bonaerensis.DF502048.1                        3753 444 -     13118 I
e Balaenoptera_acutorostrata.KI537095.1                  26378522 443 +  51448160 I
e Artibeus_jamaicensis.ArtJam_scaffold_41619                 7075 421 -     29036 I
e Antilocapra_americana.AntAmePen_scaffold_42841            29107 427 +     33004 I
e Anoura_caudifer.AnoCau_scaffold_422                      388679 416 -    631301 I
e Ammotragus_lervia.NIVO01013474.1                        3518508 445 +   4113121 I
e Ailurus_fulgens.LNAC01000003.1                          7091784 657 -  16596857 I
e Ailuropoda_melanoleuca.LNAT01000321.1                  10655057 459 +  23371972 I
e Acinonyx_jubatus.LLWD01000356.1                         2031739 430 +   3721120 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           17738 0 -    119109 C
e Glis_glis.GliGli_scaffold_79770                           11388 3 -     18683 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     13979 0 -     20485 C
e Jaculus_jaculus.JH725517.1                              8564406 0 +  11848649 C
e Hylobates_pileatus_a.tarseq_592                             33311 5 -     60944 I
e Allactaga_bullata.AllBul_scaffold_70162                   11663 0 -     22067 C
e Hylobates_klossii.k141_466549                             10316 4 +     11537 I
e Galeopterus_variegatus.GalVar_scaffold_354               155011 0 +    324696 C
e Microtus_ochrogaster.CM001673.1                        22818586 0 -  98408828 C
e Xerus_inauris.XerIna_scaffold_7898                       125751 0 -    134049 C
e Varecia_variegata.k141_775891                             23550 0 -     33872 C
e Varecia_rubra.k141_432109                                  4009 0 -     20643 C
e Tupaia_tana.TupTan_flattened_line_68454                    3810 0 +     13056 C
e Tupaia_chinensis.KB320831.1                             2791553 0 -   3938065 C
e Tarsius_wallacei.k141_48636                               58530 0 +     65473 C
e Tarsius_lariang.k141_609102                               25214 0 +     42269 C
e Spermophilus_dauricus.KZ294190.1                        2238651 0 +   2842873 C
e Sigmodon_hispidus.SigHis_scaffold_11332                   98375 0 -    120886 C
e Sapajus_macrocephalus.k141_966464                         19425 0 -     62485 C
e Sapajus_apella.ctg10                                   17340066 0 -  30362882 C
e Saimiri_ustus.k141_1282476                                 3342 0 -     76454 C
e Saimiri_sciureus.k141_1947592                              3405 0 +     60816 C
e Saimiri_oerstedii.k141_841116                              3427 0 +     67014 C
e Saimiri_macrodon.k141_2087127                              3332 0 -     60842 C
e Saimiri_cassiquiarensis.k141_808270                        3391 0 +     34089 C
e Saimiri_boliviensis.NW_024100938.1                     15671474 0 -  43202129 C
e Rattus_norvegicus.chr11                                13914110 0 +  90463843 C
e Psammomys_obesus.NESX01026517.1                           32081 0 +     77221 C
e Propithecus_verreauxi.k141_158021                         37905 0 -     48185 C
e Propithecus_tattersalli.k141_907138                       15633 0 -     53241 C
e Propithecus_perrieri.k141_7554                            15997 0 +     27322 C
e Propithecus_edwardsi.k141_1317105                         34077 0 -     44753 C
e Propithecus_diadema.k141_577245                           41687 0 +     52369 C
e Propithecus_coronatus.k141_1353159                         2352 0 +     11805 C
e Propithecus_coquerelli.NW_012147997.1                    666524 0 -   2312742 C
e Prolemur_simus.MPIZ01000048.1                           6847302 0 +  12164890 C
e Plecturocebus_moloch.k141_890597                          22044 0 -     75465 C
e Plecturocebus_miltoni.k141_841561                         11454 2 +    134592 I
e Plecturocebus_hoffmannsi.k141_1595076                      8494 0 +      8943 C
e Plecturocebus_grovesi.k141_242819                         21734 0 +    152463 C
e Plecturocebus_dubius.k141_3565563                          2381 0 -     55515 C
e Plecturocebus_cupreus.k141_1223294                        21915 0 -     23762 C
e Plecturocebus_cinerascens.k141_744510                     21660 0 +    147771 C
e Plecturocebus_caligatus.k141_2539816                      12060 0 -     98129 C
e Plecturocebus_brunneus.k141_498086                        21819 2 +     67491 I
e Plecturocebus_bernhardi.k141_959214                       21609 0 +     44506 C
e Pithecia_vanzolinii.k141_831006                           12175 0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13473267 0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          4273 0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        10964 0 -     16101 C
e Pithecia_hirsuta.k141_1152968                              7766 0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        23815 0 +     78826 C
e Pithecia_albicans.k141_991845                             42386 0 -     61926 C
e Peromyscus_maniculatus.KI615518.1                       4948796 1 -   8017169 I
e Perodicticus_potto.k141_713187                            23106 0 -     27972 C
e Perodicticus_ibeanus.k141_117958                           3808 0 -     23713 C
e Otolemur_garnettii.GL873528.1                          18007194 0 -  38779656 C
e Otolemur_crassicaudatus.k141_321880                       37766 0 +     38679 C
e Onychomys_torridus.OnyTor_scaffold_12578                  35605 0 +     62360 C
e Ondatra_zibethicus.OndZib_scaffold_6821                  123834 0 +    145789 C
e Octodon_degus.JH651621.1                                3684297 0 +  10294119 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65668213 0 +  89412551 C
e Nycticebus_coucang.k141_2051882                            2604 0 +      6470 C
e Nycticebus_bengalensis.LG16                            65565875 0 -  95554990 C
e Nannospalax_galili.KL201303.1                            116888 0 +    362372 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     88760 0 -    117718 C
e Muscardinus_avellanarius.MusAve_scaffold_9643              9863 3 +     98495 I
e Mus_spretus.CM004110.1                                 74329283 0 +  97876770 C
e Mus_pahari.LT608305.1                                  67554345 0 +  89017189 C
e Mus_musculus.chr16                                     75488104 0 +  98207768 C
e Mus_caroli.LT608236.1                                  70765067 0 +  92629107 C
e Mirza_zaza.k141_226143                                     4326 0 +      8497 C
e Microcebus_murinus.CM007691.1                          16508927 0 +  47401472 C
e Mesocricetus_auratus.KB708139.1                         1045466 0 -  26018355 C
e Meriones_unguiculatus.MerUng_scaffold_52233               10531 0 +     15977 C
e Marmota_marmota.CZRN01000005.1                         36872570 0 +  64221397 C
e Loris_tardigradus.ctg97                                 3777183 0 +   6799190 C
e Loris_lydekkerianus.k141_550999                            9434 0 +     84689 C
e Lepilemur_septentrionalis.k141_578524                     30323 0 -     33031 C
e Lepilemur_ruficaudatus.k141_617879                        77309 0 +    116806 C
e Lepilemur_dorsalis.k141_134267                            52059 0 +     63517 C
e Lepilemur_ankaranensis.k141_884009                        22684 0 +     39228 C
e Lemur_catta.scaffold_1                                258405921 0 - 285822530 C
e Lagothrix_lagothricha.k141_12968                          48894 0 -    147782 C
e Indri_indri.k141_4418183                                    184 0 -      1457 C
e Ictidomys_tridecemlineatus.JH393315.1                   7124731 0 +  13083262 C
e Hystrix_cristata.HysCri_scaffold_50788                     4887 0 +     22540 C
e Heterocephalus_glaber.JH602058.1                        2549833 0 +  31725842 C
e Hapalemur_occidentalis.k141_797938                        44239 0 -     54384 C
e Hapalemur_meridionalis.k141_186231                        27641 0 -     42470 C
e Hapalemur_griseus.k141_1387522                             4365 0 +     56096 C
e Hapalemur_gilberti.k141_1254239                            8736 0 +      9690 C
e Hapalemur_alaotrensis.k141_1280836                          586 0 +     10286 C
e Graphiurus_murinus.GraMur_scaffold_4493                   76135 27 +    118900 I
e Galagoides_demidoff.k141_1769638                           9118 0 +     27357 C
e Galago_senegalensis.k141_964197                           12049 0 -     43889 C
e Galago_moholi.ctg555                                     209670 0 -    847004 C
e Fukomys_damarensis.KN123630.1                          13891437 0 -  19261668 C
e Eulemur_sanfordi.k141_186399                              14538 0 -     29447 C
e Eulemur_rufus.k141_1620292                                31816 0 +     46535 C
e Eulemur_rubriventer.k141_411740                           17083 0 +     26808 C
e Eulemur_mongoz.k141_825972                                14624 0 +     27497 C
e Eulemur_macaco.k141_1341545                               14351 0 +     16540 C
e Eulemur_fulvus.k141_653297                                 9972 0 +    109717 C
e Eulemur_flavifrons.k141_903901                             6489 0 +     60246 C
e Eulemur_coronatus.k141_3240342                            10173 0 +     36558 C
e Eulemur_collaris.k141_311830                               3697 0 -      6809 C
e Eulemur_albifrons.k141_715837                              3764 0 +     13586 C
e Ellobius_talpinus.LOJH01090055.1                           5396 0 -      7838 C
e Ellobius_lutescens.LOEQ01003611.1                        238324 20 -    369425 I
e Dolichotis_patagonum.DolPat_scaffold_14102                34836 0 -     73477 C
e Daubentonia_madagascariensis.ctg11                     16843569 0 +  31942871 C
e Dasyprocta_punctata.DasPun_flattened_line_634             57587 0 -    236241 C
e Cuniculus_paca.CunPac_flattened_line_16637                16497 0 +     26546 C
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 29465 0 -     67205 C
e Ctenodactylus_gundi.CteGun_scaffold_447                  206904 0 -    956709 C
e Cricetulus_griseus.LT883672.1                          53027728 0 +  72327488 C
e Cricetomys_gambianus.CriGam_scaffold_949                 277041 0 -    399297 C
e Chiropotes_sagulatus.k141_773804                          14061 0 +     40510 C
e Chiropotes_israelita.k141_1189915                         69881 0 +    196370 C
e Chinchilla_lanigera.JH721867.1                         15960487 0 +  43084221 C
e Cheracebus_torquatus.k141_315545                          45059 0 +     54541 C
e Cheracebus_regulus.k141_2128895                           40380 0 +     57117 C
e Cheracebus_lugens.k141_203936                             21345 0 +     25473 C
e Cheracebus_lucifer.k141_619653                             4322 0 -     18223 C
e Cheirogaleus_medius.k141_133808                            6760 0 +     13308 C
e Cheirogaleus_major.k141_1157592                           57717 0 -     68416 C
e Cephalopachus_bancanus.k141_702587                         6764 0 +     21754 C
e Cebus_unicolor.k141_239009                                11307 0 +     25043 C
e Cebus_olivaceus.k141_93739                                 7067 0 -     26817 C
e Cebus_albifrons.Contig22                               18889523 0 -  29618158 C
e Cavia_tschudii.CavTsc_scaffold_488                       175468 0 +    436027 C
e Cavia_porcellus.DS562889.1                             15797277 0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15785343 0 -  24422027 C
e Castor_canadensis.CasCan_scaffold_47037                   29421 0 +     33760 C
e Carlito_syrichta.NW_007248099.1                          307731 0 +    345090 C
e Capromys_pilorides.CapPil_scaffold_979108                   696 0 -      1248 C
e Cacajao_melanocephalus.k141_1160263                        6292 0 -    134917 C
e Cacajao_hosomi.k141_303789                                13752 0 -    216513 C
e Cacajao_calvus.k141_96166                                 11707 0 +    125063 C
e Cacajao_ayresi.k141_724503                               112679 0 -    171031 C
e Avahi_peyrierasi.k141_2689020                              1742 0 +      2719 C
e Avahi_laniger.k141_2840928                                 5422 0 -     16375 C
e Ateles_paniscus.k141_1631200                               4778 0 -     25888 C
e Ateles_marginatus.k141_899112                             62809 0 +    119057 C
e Ateles_geoffroyi_a.k141_1300742                             14818 0 -     58268 C
e Ateles_chamek.k141_1072810                                10313 0 +     89302 C
e Ateles_belzebuth.k141_1348307                             59314 0 +     85812 C
e Ateles_geoffroyi_b.tarseq_2582                             9538030 0 +  39197703 C
e Arctocebus_calabarensis.k141_1161114                      16581 0 +     17483 C
e Aotus_vociferans.k141_718647                               4779 0 +     23246 C
e Aotus_trivirgatus.k141_1740727                             4773 0 -    104377 C
e Aotus_nancymaae.KZ196176.1                              5748188 0 +   9889416 C
e Aotus_griseimembra.k141_3275623                            4231 0 +     22701 C
e Aotus_azarae.k141_3170768                                 61290 0 +     78111 C
e Alouatta_seniculus.k141_990213                             5573 0 +      6429 C
e Alouatta_puruensis.k141_1284840                            2644 0 -      4927 C
e Alouatta_palliata.k141_1316127                             8834 0 +     10410 C
e Alouatta_nigerrima.k141_2718643                            5554 0 +      7047 C
e Alouatta_macconnelli.k141_1331706                          8898 0 -     10438 C
e Alouatta_juara.k141_298055                                  898 0 +      1823 C
e Alouatta_discolor.k141_811576                              9602 0 -     21359 C
e Alouatta_caraya.k141_5460                                 10038 0 -     11521 C
e Alouatta_belzebul.k141_1818029                             8925 0 -     18050 C
e Acomys_cahirinus.AcoCah_scaffold_1625                    111076 0 -    189883 C
e Nomascus_gabriellae.k141_642452                             764 0 +      2851 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               10667 55 +    209709 TTTGATTC-CA-cttt--t---ctTTCCTG-TG----AT-----------TCCCC-CA-------TGCGT--GTA-----------------------------ATa---aatgtgtaca
s Acomys_cahirinus.AcoCah_scaffold_1625                    111076 21 -    189883 ------------TTT---T---CTTTCATG-TG----TT-----------G-TGC-T---------------------------------------------------------------
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   11663 46 -     22067 ----------c-tca-tat---ttttcctg-tg----at-----------gc----tatcatatatatat--atat----------at------------------a--t-ata------
i Allactaga_bullata.AllBul_scaffold_70162               C 0 I 59
s Allenopithecus_nigroviridis.k141_3103728                   1269 55 +      1665 TTTACATC-CA-ATTT--T---ctttcctg-tg----at-----------tcccc-ca-------tgcat--gta-----------------------------ata---aatgtgtata
i Allenopithecus_nigroviridis.k141_3103728              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                          745 55 -     29318 ttTACATC-CA-ATTT--T---ctctcctg-tg----at-----------tcccc-ca-------tgcat--gaa-----------------------------ata---aatgtgtata
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_21781                            883 55 +      1343 TTTACATC-CA-ATTT--T---ctttcctg-tg----at-----------tcccc-ca-------tgcat--gta-----------------------------ata---aatgtgtata
i Allochrocebus_preussi.k141_21781                      I 61 C 0
s Allochrocebus_solatus.k141_371672                           639 55 -     80423 ttTACATC-CA-ATTT--T---ctctcctg-tg----at-----------tcccc-ca-------tgcat--gaa-----------------------------ata---aatgtgtata
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             8925 53 -     18050 --TGCATC-CG-CTTT--T---CTTTCctg-tg----at-----------ccccc-tg-------tgcat--gta-----------------------------ata---aatgtgtata
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                 10038 53 -     11521 --TGCATC-CG-CTTT--T---CTTTCCTG-TG----AT-----------CCACC-TG-------TGCAT--GTA-----------------------------ATA---AATGTGTATA
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              9602 53 -     21359 --TGCATC-CG-CTTT--T---CTTTCctg-tg----at-----------ccccc-tg-------tgcat--gta-----------------------------ata---aatgtgtata
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_298055                                  898 53 +      1823 --TGCATC-CA-CTTT--T---CTTTCCTG-TG----AT-----------CCCCC-TG-------TGCAT--GTA-----------------------------ATA---AATGTGTATA
i Alouatta_juara.k141_298055                            C 0 I 61
s Alouatta_macconnelli.k141_1331706                          8898 53 -     10438 --TGCATC-CA-CTTT--T---CTTTCctg-tg----at-----------ccccc-tg-------tgcat--gta-----------------------------ata---aatgtgtata
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            5554 53 +      7047 --TGCATC-CG-CTTt--t---ctttcctg-tg----at-----------ccccc-tg-------tgcac--gta-----------------------------ata---aatgtgtata
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             8834 53 +     10410 --TGCATC-CG-CTTt--t---cttttctg-cg----at-----------ccccc-tg-------tgcat--gta-----------------------------ata---aatgtgtata
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            2644 53 -      4927 --TGCATC-CA-CTTT--T---CTTTCctg-tg----at-----------ccccc-tg-------tgcat--gta-----------------------------ata---aatgtgtata
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             5573 53 +      6429 --TGCATC-CA-CTTT--T---CTTTCctg-tg----at-----------ccccc-tg-------tgcat--gta-----------------------------ata---aatgtgtata
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Aotus_azarae.k141_3170768                                 61290 53 +     78111 --TGCATC-CA-CTTT--T---ctttcctg-tg----at------------ccccctg-------tgcat--gta-----------------------------ata---aatgtgtgta
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            4231 53 +     22701 --TGCATC-CA-CTTT--T---ctttcctg-tg----at------------ccccctg-------tgcat--gta-----------------------------ata---aatgtgtgta
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5748188 53 +   9889416 --tgcatc-cA-CTTT--T---CTTTCCTG-TG----AT------------CCCCCTG-------TGCAT--GTA-----------------------------ATA---AATGTGTATA
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             4773 53 -    104377 --TGCATC-CA-CTTT--T---ctttcctg-tg----at------------ccccctg-------tgcat--gta-----------------------------ata---aatgtgtata
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               4779 53 +     23246 --TGCATC-CA-CTTT--T---ctttcctg-tg----at------------ccccctg-------tgcat--gta-----------------------------ata---aatgtgtata
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     2576  3 +      5067 ----------A-CT----------------------------------------------------------------------------------------------------------
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 I 2
s Arctocebus_calabarensis.k141_1161114                      16581 54 +     17483 ----TATT-CA-CTTT--T---CTTTCCTG-TG----AT-----------GCCCT-CA-------TGCAT--GAA-----------------------------ATAGTAAATCTGGATA
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9538030 53 +  39197703 --TGCATC-CA-TTTT--T---ctttcctg-tg----at-----------ccccc-tg-------tgcat--gta-----------------------------ata---aacgtgtata
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             59314 21 +     85812 --TGCATC-CA-TTTT--T---CTTTCCTG------------------------------------------------------------------------------------------
i Ateles_belzebuth.k141_1348307                         C 0 I 19
s Ateles_chamek.k141_1072810                                10313 53 +     89302 --TGCATC-CA-TTTT--T---ctttcctg-tg----at-----------ccccc-tg-------tgcat--gta-----------------------------ata---aacgtgtata
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             14818 53 -     58268 --TGCATC-CA-TTTT--T---ctttcctg-tg----at-----------ccccc-tg-------tgcat--gta-----------------------------ata---aacgtgtata
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             62809 53 +    119057 --TGCATC-CA-TTTT--T---ctttcctg-tg----at-----------ccccc-tg-------tgcat--gta-----------------------------ata---aacgtgtata
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               4778 53 -     25888 --TGCATC-AA-TTTT--T---ctttcctg-tg----at-----------ccccc-tg-------tgcat--gta-----------------------------ata---aacgtgtata
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 5422 51 -     16375 ----tatt-ca-cttt--t---ctttcctg-tg----at-----------gcccc-ca-------tgcat--aca-----------------------------atg---aatttgtata
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              1742 51 +      2719 ----tatt-ca-cttt--t---atttcctg-tg----at-----------gcccc-ca-------tgcat--aca-----------------------------atg---aatttgtata
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Cacajao_ayresi.k141_724503                               112679 53 -    171031 --tgCATC-CA-CTTT--T---ctttcctg-ta----at-----------ccccc-tg-------tgcat--gta-----------------------------ata---aatgtgtata
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 11707 53 +    125063 --TGCATC-CA-CTTT--T---ctttcctg-ta----at-----------ccccc-tg-------tgcat--gta-----------------------------ata---aatgtgtata
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                13752 53 -    216513 --TGCATC-CA-CTTT--T---ctttcctg-ta----at-----------ccccc-tg-------tgcat--gta-----------------------------ata---aatgtgtata
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        6292 53 -    134917 --TGCATC-CA-CTTT--T---ctttcctg-ta----at-----------ccccc-tg-------tgcat--gta-----------------------------ata---aatgtgtata
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Capromys_pilorides.CapPil_scaffold_979108                   696 44 -      1248 ----------gccct---t---ctttcctt-ct----gt-----------gct-ctct-------tga----ata-----------------------------ata---catgtgtaca
i Capromys_pilorides.CapPil_scaffold_979108             C 0 C 0
s Carlito_syrichta.NW_007248099.1                          307731 27 +    345090 ----tatt-CA-CTTA--T---CTTT-CTG-TG----AT-----------GCTCA-----------------------------------------------------------------
i Carlito_syrichta.NW_007248099.1                       C 0 I 22
s Castor_canadensis.CasCan_scaffold_47037                   29421 32 +     33760 -------------TT---T---CTTCTCTGATG----AT-----------GACCC-CA-------TGCAC--ATA-----------------------------T---------------
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15785343 45 -  24422027 ----------aattt---t---cttttctg-tg----at-----------gcc-C-CA-------TGCAC--ATT-----------------------------ACA---CATGTGTACG
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15797277 45 -  24440124 ----------aattt---t---cttttctg-tg----at-----------gcc-c-ca-------tgcac--att-----------------------------aca---catgtgtacg
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       175468 45 +    436027 ----------aattt---t---cttttctg-tg----at-----------gcc-c-ca-------tgcac--att-----------------------------aca---catgtgtacg
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18889523 52 -  29618158 --tgcatc-ca-cttt--t---ctttcctg-tg----at------------cccc-tg-------tgcat--gta-----------------------------ata---aatgtgtatg
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 7067 52 -     26817 --tgCATC-CA-CTTt--t---ctttcctg-tg----at------------cccc-tg-------tgcat--gta-----------------------------ata---aatgtgtatg
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                11307 52 +     25043 --TGCATC-CA-CTTt--t---ctttcctg-tg----at------------cccc-tg-------tgcat--gta-----------------------------ata---aatgtgtatg
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         6764 27 +     21754 ----tatt-ca-ctta--t---cttt-ctg-tg----at-----------gctca-----------------------------------------------------------------
i Cephalopachus_bancanus.k141_702587                    C 0 I 22
s Cercocebus_atys.KQ010443.1                              6553961 55 +   6739814 tttacatc-cA-ATTT--T---CTTTCCTG-TG----AT-----------TCCCC-CA-------TGCAT--GTA-----------------------------ATA---AATGTGTATA
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      25438 55 +     60454 TTTACATC-CA-ATTT--T---ctttcctg-tg----at-----------tcccc-ca-------tgcat--gta-----------------------------ata---aatgtgtata
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                           643 55 -     21101 TTTACATC-CA-ATTT--T---ctttcctg-tg----at-----------tcccc-ca-------tgcat--gta-----------------------------ata---aatgtgtata
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         57953 55 -    107033 TTTACATC-CA-ATTT--T---ctttcctg-tg----at-----------tcccc-ca-------tgcat--gta-----------------------------ata---aatgtgtata
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                         845 55 -     17608 ttTACATC-CA-ATTT--T---ctctcctg-tg----at-----------tcccc-ca-------tgcat--gta-----------------------------ata---aatgtgtata
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          28343 55 +     30494 TTTACATC-CA-ATTT--T---ctctcctg-tg----at-----------tcccc-ca-------tgcat--gta-----------------------------ata---aatgtgtata
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          57186 55 -     59240 ttTACATC-CA-ATTT--T---ctctcctg-tg----at-----------tcccc-ca-------tgcat--gta-----------------------------ata---aatgtgtata
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                           887 55 +     16677 TTTACATC-CA-ATTT--T---ctctcctg-tg----at-----------tcccc-ca-------tgcat--gta-----------------------------ata---aacgtgtata
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           23045 55 +     35983 TTTACATC-CA-ATTT--T---ctctccta-tg----at-----------tcccc-ca-------tgcat--gta-----------------------------ata---aatgtgtata
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11989576 55 +  12117833 TTTACATC-CA-ATTT--T---ctctcctg-tg----at-----------tcccc-ca-------tgcat--gta-----------------------------ata---aatgtgcata
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46476331 55 +  46592721 TTTACATC-CA-ATTT--T---ctctccta-tg----at-----------tcccc-ca-------tgcat--gta-----------------------------ata---aatgtgtata
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      39882 55 -     45581 ttTACATC-CA-ATTT--T---ctctcctg-tg----at-----------tcccc-ca-------tgcat--gta-----------------------------ata---aatgtgtata
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                        891 55 +     35577 TTTACATC-CA-ATTT--T---ctctcctg-tg----at-----------tcccc-ca-------tgcat--gta-----------------------------ata---aatgtgcata
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                         664 55 -     25661 ttTACATC-CA-ATTT--T---ctctcctg-tg----at-----------tcccc-ca-------tgcat--gta-----------------------------ata---aatgtgtata
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                         642 55 -     17744 ttTACATC-CA-ATTT--T---ctctcctg-tg----at-----------tcccc-ca-------tgcat--gta-----------------------------ata---aatgtgtata
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        20251 55 +     37128 TTTACATC-CA-ATTT--T---ctctcctg-tg----at-----------tcccc-ca-------tgcat--gta-----------------------------ata---aatgtgtata
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           57717 50 -     68416 ----tatt-ca-tttt--t---ctttcccg-tg----at-----------g-cct-ca-------tgcat--ata-----------------------------atg---aatttgtata
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            6760 50 +     13308 ----tatt-ca-cttt--t---ctttcctg-tg----at-----------g-cct-ca-------tgcat--ata-----------------------------atg---aatttgtata
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             4322 53 -     18223 --TGCATT-CA-CTTT--T---CTTTCCTA-TG----At-----------cccct-tg-------tgcat--gta-----------------------------ata---aatgtgtata
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             21345 53 +     25473 --TGCATT-CA-CTTT--T---CTTTCCTA-TG----At-----------cccct-tg-------tgcat--gta-----------------------------ata---aatgtgtata
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           40380 53 +     57117 --TGCATT-CA-CTTT--T---CTTTCCTA-TG----At-----------cccct-tg-------tgcat--gta-----------------------------ata---aatgtgtata
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          45059 53 +     54541 --TGCATT-CA-CTTT--T---CTTTCCTA-TG----At-----------cccct-tg-------tgcat--gta-----------------------------ata---aatgtgtata
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15960487 46 +  43084221 ----------agctt---t---ctttcctg-tg----at-----------ttc-ccca-------tgcac--ata-----------------------------aca---catgtgtaca
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         69881 53 +    196370 --TGCATC-CA-CTTT--T---CTTTCCTG-TA----At-----------ccccc-tg-------tgcat--gta-----------------------------ata---aatgtgtata
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          14061 53 +     40510 --TGCATC-CA-CTTT--T---CTTTCCTG-TA----At-----------ccccc-tg-------tgcat--gta-----------------------------ata---aatgtgtata
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15137805 55 -  15256731 ttTACATC-CA-ATTT--T---ctctcctg-tg----at-----------tcccc-ca-------tgcat--gta-----------------------------ata---aatgtgtata
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      32852 55 -     53260 ttTACATC-CA-ATTT--T---ctctcctg-tg----at-----------tcccc-ca-------tgcat--gta-----------------------------ata---aatgtgtata
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101143415 55 + 101219884 tttacatc-ca-ATTT--T---CTCTCCTG-TG----AT-----------TCCCC-CA-------TGCAT--GTA-----------------------------ATA---AATGTGTATA
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10885180 55 +  10971483 tttacatc-cA-ATTT--T---CTTTCCTG-TG----AT-----------TCCCC-CA-------CGCAG--GTA-----------------------------ATA---AATGTgtata
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147663344 55 + 156195979 tttacatc-ca-attt--t---ctttcctg-tg----at-----------tcccc-ca-------cgcag--gta-----------------------------ata---aatgtgtata
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            15328 55 +     23629 tttacatc-ca-attt--t---ctttcctg-tg----at-----------tcccc-ca-------cgcag--gta-----------------------------ata---aatgtgtata
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 277041 22 -    399297 ----------C-TTT---T---CTTTCCTG-TG----AT-----------G-TGC-C---------------------------------------------------------------
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53027728 21 +  72327488 ------------ttt---t---cttttctg-tg----at-----------g-ttC-T---------------------------------------------------------------
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  206904 46 -    956709 -------------tt---t---ctctcctg-ca----at-----------gaccc-catc----gtgcac--act-----------------------------gta---aatgtgcatg
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 29465 17 -     67205 ----------gcctt---t---ctttcctg-tg----a----------------------------------------------------------------------------------
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 I 19
s Cuniculus_paca.CunPac_flattened_line_16637                16497 44 +     26546 ----------aactt---t---cttttctg-tg----at-----------gcc-cccg-------tgcac--ata-----------------------------aca---c--gtgcaca
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             57587 46 -    236241 ----------aattt---t---cttttctg-tg----gt-----------gcc-ccta-------tgcac--aca-----------------------------aca---catgtggaga
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16843569 51 +  31942871 ----tatt-ca-cttt--t---ctttcctg-tg----at-----------gcccc-ca-------tgcgt--gta-----------------------------ata---aatttgtata
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Dipodomys_ordii.KN672545.1                              3654933 32 +   4240102 ------------------------ttccta-TG----TT-----------CTTCT-CA-------TGTAC--TTA-----------------------------ACA---A------ATG
i Dipodomys_ordii.KN672545.1                            I 1 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 26569 32 +     28912 ------------------------TTCCTA-TG----TT-----------CTTCT-CA-------TGTAC--TTA-----------------------------ACA---A------ATG
i Dipodomys_stephensi.DipSte_scaffold_44365             I 1 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                34836 43 -     73477 ----------aactt---t---ctgttctg-tg----ct------------cc---ca-------tgcac--ata-----------------------------aca---catgtgtaca
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           5396 21 -      7838 ------------ttt---t---ctctcttg-tg----ac-----------g-ttt-c---------------------------------------------------------------
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Erythrocebus_patas.Contig8                             48769985 55 -  48907691 ttTACATC-CA-ATTT--T---ctctcctg-tg----at-----------tcccc-ca-------tgcat--gta-----------------------------ata---aatgtgtata
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eulemur_albifrons.k141_715837                              3764 51 +     13586 ----tatt-ca-tttt--t---ctttcctg-tg----at-----------gcccc-ca-------tgcat--ata-----------------------------atg---aattcgtatg
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               3697 51 -      6809 ----tatt-ca-tttt--t---ctttcctg-tg----at-----------gcccc-ca-------tgcat--ata-----------------------------atg---aattcgtatg
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            10173 51 +     36558 ----tatt-ca-cttt--t---ctttcctg-tg----at-----------gcccc-ca-------tgcat--cta-----------------------------atg---aatccgtatg
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             6489 51 +     60246 ----tatt-ca-cttt--t---ctttcctg-tg----at-----------gccct-ca-------tgcat--ata-----------------------------atg---aatttgtatg
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                 9972 51 +    109717 ----tatt-ca-tttt--t---ctttcctg-tg----at-----------gcccc-ca-------tgcat--ata-----------------------------atg---aattcgtatg
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               14351 51 +     16540 ----tatt-ca-cttt--t---ctttcctg-tg----at-----------gcccc-ca-------tgcat--ata-----------------------------atg---aattcgtatg
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                14624 51 +     27497 ----tatt-ca-tttt--t---ctttcctg-tg----at-----------gcccc-ca-------tgcat--ata-----------------------------atg---aattcgtatg
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           17083 51 +     26808 ----tatt-ca-tttt--t---ctttcctg-tg----at-----------gcccc-ca-------tgcat--ata-----------------------------atg---aattcgtatg
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                31816 51 +     46535 ----tatt-ca-tttt--t---ctttcctg-tg----at-----------gcccc-ca-------tgcat--ata-----------------------------atg---aattcgtatg
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              14538 51 -     29447 ----tatt-ca-tttt--t---ctttcctg-tg----at-----------gcccc-ca-------tgcat--ata-----------------------------atg---aattcgtatg
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Fukomys_damarensis.KN123630.1                          13891437 46 -  19261668 ----------gcctt---t---ccttccta-tg----at-----------gct-gtca-------tgtac--ata-----------------------------act---aatgtgttca
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     209670 54 -    847004 ----tatt-ca-cttt--t---ctttcctg-tg----at-----------gcccc-ca-------tgcat--gta-----------------------------ataataaatttagata
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           12049 54 -     43889 ----tatt-ca-cctt--t---ctttcctg-tg----at-----------gccca-ca-------tgcat--gta-----------------------------ataataaatttagata
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           9118 54 +     27357 ----tatt-ca-cttt--t---ctttcctg-tg----at-----------gcccc-ca-------tgcat--gta-----------------------------ataaaaaatttagata
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               155011 50 +    324696 ----taat-cc-cttt--t---ctttccta-tg----at-----------atccc-ca-------tgcac--att-----------------------------acc---aattc-ctta
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           11391 42 -     18683 --------------------------------------------------------------------------cttcttcctgtgatgccccccatgcacataata---aatgtgt-ta
i Glis_glis.GliGli_scaffold_79770                       I 3 C 0
s Gorilla_beringei.k141_111300                               4052 55 -     14630 tttgcatc-ca-cttt--t---ctttcctg-tg----at-----------tcccc-ca-------tgcat--gta-----------------------------ata---aatgtgtaca
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119651151 55 - 195582420 tttgcatc-ca-cttt--t---ctttcctg-tg----at-----------tcccc-ca-------tgcat--gta-----------------------------ata---aatgtgtaca
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   76162 13 +    118900 --------------------------------------------------------------------------------------------------------aca---tatatgcata
i Graphiurus_murinus.GraMur_scaffold_4493               I 27 C 0
s Hapalemur_alaotrensis.k141_1280836                          586 51 +     10286 ----tatt-ca-cttt--t---ctttcctg-tg----at-----------gcctc-ca-------tgcat--ata-----------------------------atg---aattcgtatg
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_1254239                            8736 51 +      9690 ----tatt-ca-cttt--t---ctttcctg-tg----at-----------gcctc-ca-------tgcat--ata-----------------------------atg---aattcgtatg
i Hapalemur_gilberti.k141_1254239                       C 0 C 0
s Hapalemur_griseus.k141_1387522                             4365 51 +     56096 ----tatt-ca-cttt--t---ctttcctg-tg----at-----------gcctc-ca-------tgcat--ata-----------------------------atg---aattcgtatg
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        27641 51 -     42470 ----tatt-ca-cttt--t---ctttcctg-tg----at-----------gcctc-ca-------tgcat--ata-----------------------------atg---aattcgtatg
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        44239 51 -     54384 ----tatt-ca-cttt--t---ctttcctg-tg----at-----------gcctc-ca-------tgcat--ata-----------------------------atg---aattcgtatg
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2549833 16 +  31725842 ----------acctt---t---ctttcctg-tg---------------------------------------------------------------------------------------
i Heterocephalus_glaber.JH602058.1                      C 0 I 19
s Hoolock_leuconedys.ctg649                                   102475 55 +    115816 tttgcatc-ca-cttt--t---ctttcctg-tg----at-----------ttccc-ca-------tgcgt--gta-----------------------------ata---aatgtgtaca
i Hoolock_leuconedys.ctg649                                I 2730 I 153
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           17738 19 -    119109 ----------aactt---t---cctttctg-tg----at-----------g---------------------------------------------------------------------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 I 16
s Hylobates_abbotti.k141_866183                               720 55 -      1027 TTtgcatc-ca-cttt--t---ctttcctg-tg----at-----------ttccc-ca-------tgcgt--gta-----------------------------ata---aatgtgtaca
i Hylobates_abbotti.k141_866183                         C 0 C 0
s Hylobates_agilis.k141_624065                                742 55 +      2112 TTTGCATC-CA-CTTt--t---ctttcctg-tg----at-----------ttccc-ca-------tgcgt--gtt-----------------------------ata---aatgtgtaca
i Hylobates_agilis.k141_624065                          C 0 C 0
s Hylobates_klossii.k141_466549                             10320 53 +     11537 --tgcatc-ca-cttt--t---ctttcctg-tg----at-----------ttccc-ca-------tgcgt--gta-----------------------------ata---aatgtgtaca
i Hylobates_klossii.k141_466549                         I 4 C 0
s Hylobates_pileatus_b.ContigUN                                 14623427 51 -  25970782 ----catc-ca-cttt--t---ctttcctg-tg----at-----------ttccc-ca-------tgcgt--gta-----------------------------ata---aatgtgtaca
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1002428                             684 55 +      1029 TTtgcatc-ca-cttt--t---ctttcctg-tg----at-----------ttccc-ca-------tgcgt--gta-----------------------------ata---aatgtgtaca
i Hylobates_muelleri.k141_1002428                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     4887 46 +     22540 ----------gcttt---t---ctttctgg-cg----at-----------gcccc-ca-------tgcac--ata-----------------------------aca---aaggtgttca
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7124731  1 +  13083262 -------------t----------------------------------------------------------------------------------------------------------
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 I 2
s Indri_indri.k141_4418183                                    184 51 -      1457 ----tatt-ca-cttt--t---ctttCCTG-GG----AT-----------GCCCT-CA-------TGCAT--ATA-----------------------------ATG---AATTTGTATA
i Indri_indri.k141_4418183                              C 0 C 0
s Jaculus_jaculus.JH725517.1                              8564406 37 +  11848649 ----------T-GCA---T---TTTTCctg-tg----at-----------tt----ta-------tatat--atat----------at------------------a--t-ata------
i Jaculus_jaculus.JH725517.1                            C 0 I 56
s Lagothrix_lagothricha.k141_12968                          48894 53 -    147782 --tgCATC-CA-CTTT--T---CTTTCCTG-TG----AT-----------CCCCC-TG-------TGCAT--GTA-----------------------------ATA---AATGTGTATA
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lemur_catta.scaffold_1                                258405921 51 - 285822530 ----tatt-ca-cttt--t---ctttcctg-tg----at-----------gcccc-ca-------tgcat--ata-----------------------------atg---aattcgtatg
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        22684 51 +     39228 ----catt-ca-cttt--t---ctttcctg-tg----at-----------gcccc-ca-------tgcat--aca-----------------------------atg---aatttgtata
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            52059 51 +     63517 ----catt-ca-cttt--t---ctttcctg-tg----at-----------gcccc-ca-------tgcat--aca-----------------------------atg---aatttgtata
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        77309 51 +    116806 ----catt-ca-cttt--t---ctttcctg-tg----at-----------gcccc-ca-------tgcat--aca-----------------------------atg---aatttgtata
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     30323 51 -     33031 ----catt-ca-cttt--t---ctttcctg-tg----at-----------gcccc-ca-------tgcat--aca-----------------------------atg---aatttgtata
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    11717 45 +     22452 ----------a-cttc--t---cttccctg-tg----ac-----------tctcc-tg-------gaaaa--gta-----------------------------ata---agtttgtgc-
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lophocebus_aterrimus.ctg55                             19247050 55 +  19376315 TTTACATC-CA-ATTT--T---ctttcctg-tg----at-----------tcccc-ca-------tgcat--gta-----------------------------ata---aatgtgtata
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            9434 54 +     84689 ----tatt-ca-cctt--t---ctttcctg-tg----aa-----------gcccc-ca-------tgcat--gaa-----------------------------ataataaatgtggata
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3777183 54 +   6799190 ----tatt-ca-cctt--t---ctttcctg-tg----aa-----------gcccc-ca-------tgcat--gaa-----------------------------ataataaatgtggata
i Loris_tardigradus.ctg97                               C 0 C 0
s Macaca_arctoides.k141_2201161                             18725 55 +     74745 TTTACATC-CA-ATTT--T---ctttcccg-tg----at-----------tcccc-ca-------tgcat--gta-----------------------------ata---aatgtgtata
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12705246 55 +  12821369 TTTACATC-CA-ATTT--T---ctttcccg-tg----at-----------tcccc-ca-------tgcat--gta-----------------------------ata---aatgtgtata
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                 891 55 -      3136 ttTACATC-CA-ATTT--T---ctttcccg-tg----at-----------tcccc-ca-------tgcat--gta-----------------------------ata---aatgtgtata
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           45642 55 +     63263 TTTACATC-CA-ATTT--T---ctttcccg-tg----at-----------tcccc-ca-------tgcat--gta-----------------------------ata---aatgtgtata
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                  408 55 -      2568 ttTACATC-CA-ATTT--T---CTTTCCCA-tg----at-----------tcccc-ca-------tgcat--gta-----------------------------ata---aatgtgtata
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                  916 55 -      7381 ttTACATC-CA-ATTT--T---ctttcccg-tg----at-----------tcccc-ca-------tgcat--gta-----------------------------ata---aatgtgtata
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  44153 55 -     79256 ttTACATC-CA-ATTT--T---ctttcccg-tg----at-----------tcccc-ca-------tgcat--gta-----------------------------ata---aatgtgtata
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196034323 55 + 196197964 tttacaTC-CA-ATTT--T---CTTTCCCG-TG----AT-----------TCCCC-CA-------TGCAT--GTA-----------------------------ATA---AATGTGTATA
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11444428 55 +  11645122 tttacaTC-CA-ATTT--T---CTTTCCCG-TG----AT-----------TCCCC-CA-------TGCAT--GTA-----------------------------ATA---AATGTGTATA
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   3100 55 -     46448 ttTACATC-CA-ATTT--T---ctttcccg-tg----at-----------tcccc-ca-------tgcat--gta-----------------------------ata---aatgtgtata
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                 772 55 -     13212 ttTACATC-CA-ATTT--T---ctttcccg-tg----at-----------tcccc-ca-------tgcat--gta-----------------------------ata---aatgtgtata
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 14514 55 -     55006 ttTACATC-CA-ATTT--T---ctttcccg-tg----at-----------tcccc-ca-------tgcat--gta-----------------------------ata---aatgtgtata
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43839551 55 +  43892939 TTTACATC-CA-ATTT--T---ctttcccg-tg----at-----------tcccc-ca-------tgcat--gta-----------------------------ata---aatgtgtata
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               15801 55 -     24607 ttTACATC-CA-ATTT--T---ctttcccg-tg----at-----------tcccc-ca-------tgcat--gta-----------------------------ata---aatgtgtata
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               3105 55 -     27140 ttTACAAC-CA-ATTT--T---ctttcccg-tg----at-----------tcccc-ca-------tgcat--gta-----------------------------ata---aatgtgtata
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43436209 55 -  43563597 TTTACATC-CA-ATTT--T---ctttcctg-tg----at-----------tcccc-ca-------tgcat--gta-----------------------------ata---aatgtgtata
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4449035 55 -   4543643 tttacatc-ca-attt--t---ctttcctg-tg----at-----------tcccc-ca-------tgcat--gta-----------------------------ata---aatgtgtata
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36872570  1 +  64221397 -------------t----------------------------------------------------------------------------------------------------------
i Marmota_marmota.CZRN01000005.1                        C 0 I 2
s Meriones_unguiculatus.MerUng_scaffold_52233               10531 21 +     15977 ------------TTT---T---CTTTGCTG-CA----TT-----------T-TGC-C---------------------------------------------------------------
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1045466 21 -  26018355 ------------TTT---T---CTTCCCTG-TG----AT-----------G-TTC-C---------------------------------------------------------------
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Microcebus_murinus.CM007691.1                          16508927 51 +  47401472 ----tatc-CA-CTTT--T---CTTTCCTG-TG----GT-----------GCCCC-CA-------TGCAT--ATA-----------------------------Atg---aatttgtatg
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22818586 21 -  98408828 ------------ttt---t---ctctcttg-tg----AC-----------A-TTT-C---------------------------------------------------------------
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miopithecus_ogouensis.k141_2935907                          762 55 +     29742 TTTACATC-CA-ATTT--T---ctctcctg-tg----at-----------tcccc-ca-------tgcat--gta-----------------------------ata---aatgtgtata
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirza_zaza.k141_226143                                     4326 51 +      8497 ----tatc-ta-cttt--t---ctttcctg-tg----gt-----------acccc-ca-------tgcat--ata-----------------------------atg---aattcgtatg
i Mirza_zaza.k141_226143                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              9866 14 +     98495 --------------------------------------------------------------------------C-----------------------------ata---aatatgccta
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 3 C 0
s Mus_caroli.LT608236.1                                  70765067 21 +  92629107 ------------ttt---t---ctttcctg-tc----tt-----------g-caC-C---------------------------------------------------------------
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75488104 21 +  98207768 ------------ttt---t---ctttcctg-tc----tt-----------g-cGC-C---------------------------------------------------------------
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67554345 21 +  89017189 ------------TAC---T---CTTTCCTG-TC----TT-----------G-CGT-C---------------------------------------------------------------
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74329283 21 +  97876770 ------------ttt---t---ctttcctg-tc----tt-----------g-cGC-C---------------------------------------------------------------
i Mus_spretus.CM004110.1                                C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     88760 44 -    117718 ----------ccccg---t---ctttcctg-tg----at-----------gcg-ctct-------tga----ata-----------------------------acc---catgtgtaca
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Nannospalax_galili.KL201303.1                            116888 44 +    362372 ----------c-ttt---t---ctttcctg-tg----ag-----------t-ttc-ca-------agcac--ata-----------------------------aca---aatgcatgta
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               7263 55 +     48152 TTTACATC-CA-ATTT--T---CTTTCctg-tg----at-----------tcccc-ca-------tgcgt--gta-----------------------------ata---aatgtatata
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Nomascus_annamensis.k141_302224                             727 55 +      1516 TTtgcatc-ca-cttt--t---ctttcctg-tg----at-----------ttcct-ca-------tgcgt--gta-----------------------------ata---aatgtgtaca
i Nomascus_annamensis.k141_302224                       C 0 I 53
s Nomascus_concolor.k141_49591                               1853 55 +      2014 TTtgcatc-ca-cttt--t---ctttcctg-tg----at-----------ttccc-ca-------tgcgt--gta-----------------------------ata---aatgtgtaca
i Nomascus_concolor.k141_49591                          C 0 C 0
s Nomascus_gabriellae.k141_642452                             764 54 +      2851 -ttgcatc-ca-cttt--t---cttttctg-tg----at-----------ttccc-ca-------tgcgt--gta-----------------------------ata---aatgtgtaca
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             24146 29 -  18771707 ttttgttt-tg-tttt--g---ttttgttt-tg----tt-----------tt--------------------------------------------------------------------
i Nomascus_siki_b.tarseq_80                         I 458 C 0
s Nomascus_siki_a.k141_595747                                  1401 55 +      4512 TTtgcatc-ca-cttt--t---ctttcctg-tg----at-----------ttccc-ca-------tgcgt--gta-----------------------------ata---aatgtgtaca
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nycticebus_bengalensis.LG16                            65565875 54 -  95554990 ----TATT-CA-CTTT--T---CTTTCCTG-CG----AT-----------GCCCC-CA-------TGCAT--GAA-----------------------------ATAATAAATTAGGATA
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            2604 54 +      6470 ----tatt-ca-cttt--t---ctttcctg-cg----at-----------gcccc-ca-------tgcat--gaa-----------------------------ataataaattaggata
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65668213 54 +  89412551 ----tatt-ca-cttt--t---ctttcctg-tg----at-----------gcccc-ca-------tgcat--gaa-----------------------------ataataaattaggata
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4994749 45 -  23139505 ----------A-CTTT--T---CTGCCCTG-TG----AT-----------TCTCT-TA-------CGCAT--GTa-----------------------------ata---aatttgcat-
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3684297 46 +  10294119 ----------GCCTT---T---CTTCCCTG-CG----AT-----------GCC-CTCT-------TGC--ACATA-----------------------------ACA---CGTATGTACA
i Octodon_degus.JH651621.1                              C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  123834 21 +    145789 ------------TTT---T---CTCTCTTG-TG----AC-----------G-TTT-C---------------------------------------------------------------
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  35605 21 +     62360 ------------ttt---t---ctttcctg-tg----at-----------g-tcc-T---------------------------------------------------------------
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141874375 45 + 163896628 ----------a-cttc--t---cttccctg-tg----ac-----------tttcc-tg-------gaaaa--gta-----------------------------gta---agtttgtgc-
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       37766 54 +     38679 ----tatt-ca-cttt--t---ctttcctg-tg----at-----------gcccc-ca-------tgcat--gta-----------------------------ataataaatttagata
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18007194 54 -  38779656 ----tatt-ca-cttt--t---ctttcctg-tg----aT-----------GCCCC-CA-------TGCAT--GTA-----------------------------ATAATAAATTTAGata
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Pan_paniscus.CM003386.1                               127573405 55 - 205426864 tttgcatC-CA-CTTT--T---CTCTCCTG-TG----AT-----------TCCCC-CA-------TGCAT--GTA-----------------------------ATA---AATGTGTaca
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120150558 55 - 196562556 tttgcatC-CA-CTTT--T---CTTTCCTG-TG----AT-----------TCCCC-CA-------TGCAT--GTA-----------------------------ATA---AATGTGTaca
i Pan_troglodytes.CM009241.2                            I 3 C 0
s Papio_anubis.CM001492.2                               188155000 55 - 188283584 tttacatc-cA-ATTT--T---CTTTCCTG-TG----AT-----------TCCCC-CA-------TGCAT--GTA-----------------------------ATA---AATGTGTata
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             3317 55 +      5367 TTTACATC-CA-ATTT--T---ctttcctg-tg----at-----------tcccc-ca-------tgcat--gta-----------------------------ata---aatgtgtata
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47512388 55 +  47705337 TTTACATC-CA-ATTT--T---ctttcctg-tg----at-----------tcccc-ca-------tgcat--gta-----------------------------ata---aatgtgtata
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 66366 55 -    104429 TTTACATC-CA-ATTT--T---ctttcctg-tg----at-----------tcccc-ca-------tgcat--gta-----------------------------ata---aatgtgtata
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    4898 55 +     14967 TTTACATC-CA-ATTT--T---ctttcctg-tg----at-----------tcccc-cg-------tgcat--gta-----------------------------ata---aatgtgtata
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                  759 55 -      7628 TTTACATC-CA-ATTT--T---ctttcctg-tg----at-----------tcccc-ca-------tgcat--gta-----------------------------ata---aatgtgtata
i Papio_ursinus.k141_1345919                            C 0 C 0
s Perodicticus_ibeanus.k141_117958                           3808 54 -     23713 ----tatt-ca-cttg--t---ctttcctg-tg----at-----------gcccc-ca-------tgcat--gaa-----------------------------atagtaaatctggata
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            23106 54 -     27972 ----tatt-ca-cttg--t---ctttcctg-tg----at-----------gcccc-ca-------tgcat--gaa-----------------------------atagtaaatctggata
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      42372 38 -     45160 ------------------------TCCCTG-TG----AT-----------CTTCT-CA-------TGTAC--TTA-----------------------------AAA---ATTCTGAATG
i Perognathus_longimembris.PerPac_flattened_line_22291  I 1 C 0
s Peromyscus_maniculatus.KI615518.1                       4948797 15 -   8017169 ------------------------CTCCTG-TG----AT-----------G-TCC-C---------------------------------------------------------------
i Peromyscus_maniculatus.KI615518.1                     I 1 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    10982 40 -     36578 ----------acctt---t---ttttcctt-c-----c----------------ctca-------cacac--ata-----------------------------aca---aatgtgtt-g
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Piliocolobus_badius.k141_1987485                            786 54 -      5908 ttTGCATC-CA-ATTT--T---ctttcctg-tg----at-----------tcccc-ca-------tgcag---ta-----------------------------ata---aatgtgtgaa
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       1405 55 -     17985 ttTGCATC-CA-ATTT--T---ctttcctg-tg----at-----------tcccc-ca-------tgcag--gta-----------------------------ata---aatgtgtata
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                             772 55 +      7694 TTTGCATC-CA-ATTT--T---ctttcctg-tg----at-----------tcccc-ca-------tgcag--gta-----------------------------ata---aatgtgtata
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26739250 55 +  26888534 tttgcatc-cA-ATTT--T---CTTTCCTG-TG----AT-----------TCCCC-CA-------TGCAG--GTA-----------------------------ATA---AATGTGTATA
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pithecia_albicans.k141_991845                             42386 53 -     61926 --TGCATC-CA-CTTT--T---CTTTCCTG-TA----At-----------ctcct-tg-------tgcat--gta-----------------------------ata---aatgtgtata
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        23815 53 +     78826 --TGCATC-CA-CTTT--T---CTTTCCTG-TA----At-----------ctcct-tg-------tgcat--gta-----------------------------ata---aatgtgtata
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              7766 53 -     15800 --TGCATC-CA-CTTT--T---CTTTCCTG-TA----At-----------ctcct-tg-------tgcat--gta-----------------------------ata---aatgtgtata
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        10964 53 -     16101 --TGCATC-CA-CTTT--T---CTTTCCTG-TA----At-----------ctcct-tg-------tgcat--gta-----------------------------ata---aatgtgtata
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          4273 53 +      9673 --TGCATC-CA-CTTT--T---CTTTCCTG-TA----At-----------ctcct-tg-------tgcat--gta-----------------------------ata---aatgtgtata
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13473267 53 -  19735023 --TGCATC-CA-CTTT--T---CTTTCCTG-TA----At-----------ctcct-tg-------tgcat--gta-----------------------------ata---aatgtgtata
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           12175 53 -     31692 --TGCATC-CA-CTTT--T---CTTTCCTG-TA----At-----------ctcct-tg-------tgcat--gta-----------------------------ata---aatgtgtata
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       21609 53 +     44506 --TGCGTT-CA-CTTT--T---CTTTCCTA-TG----At-----------cccct-tg-------tgcat--gta-----------------------------ata---aatgtgtata
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        21821 53 +     67491 --TGCGTT-CA-CTTT--T---CTTTCCTA-TG----At-----------cccct-tg-------ggcat--gta-----------------------------ata---aatgtgtata
i Plecturocebus_brunneus.k141_498086                    I 2 C 0
s Plecturocebus_caligatus.k141_2539816                      12060 53 -     98129 --TGCGTT-CA-CTTT--T---CTTTCCTA-TG----At-----------cccct-tg-------tgcat--gta-----------------------------ata---aatgtgtata
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     21660 53 +    147771 --TGCGTT-CA-CTTT--T---CTTTCCTA-TG----At-----------cccct-tg-------tgcat--gta-----------------------------ata---aatgtgtata
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        21915 53 -     23762 --tgcgtt-ca-cttt--t---ctttCCTA-TG----At-----------cccct-tg-------ggcat--gta-----------------------------ata---aatgtgtata
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          2381 53 -     55515 --TGCGTT-CA-CTTT--T---CTTTCCTA-TG----At-----------cccct-tg-------ggcat--gta-----------------------------ata---aatgtgtata
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         21734 53 +    152463 --TGCGTT-CA-CTTT--T---CTTTCCTA-TG----At-----------cccct-tg-------tgcat--gta-----------------------------ata---aatgtgtata
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      8494 53 +      8943 --TGTGTT-CA-CTTT--T---CTTTCCTA-TG----At-----------cccct-tg-------tgcat--gta-----------------------------ata---aatgtgtata
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                         11456 53 +    134592 --TGCGTT-CA-CTTT--T---CTTTCCTA-TG----At-----------cccct-tg-------tgcat--gta-----------------------------ata---aatgtgtata
i Plecturocebus_miltoni.k141_841561                     I 2 C 0
s Plecturocebus_moloch.k141_890597                          22044 53 -     75465 --TGCGTT-CA-CTTT--T---CTTTCCTA-TG----At-----------cccct-tg-------tgcat--gta-----------------------------ata---aatgtgtata
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              185937 55 -    373494 tttgcatc-ca-cttt--t---ctttcctg-tg----aT-----------TCCCC-CA-------TGCAT--GTA-----------------------------ATA---AATGTGTata
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19806585 55 +  19899266 tttgcatc-ca-cttt--t---ctttcctg-tg----at-----------tcccc-ca-------tgcat--gta-----------------------------ata---aatgtgtata
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               4507 55 -     15069 ttTACATC-CA-ATTT--T---ctttcctg-tg----at-----------tcccc-ca-------tgcat--gta-----------------------------ata---catgcgtata
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              4641 55 +     14865 TTTACATC-CA-ATTT--T---ctttcctg-tg----at-----------tcccc-ca-------tgcat--gta-----------------------------ata---catgcgtata
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6847302 51 +  12164890 ----tatt-ca-cttt--t---ctttcctg-tg----aT-----------GCCTC-CA-------TGCAT--ATA-----------------------------ATG---AATTcgtatg
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    666524 51 -   2312742 ----tttt-ca-cttt--t---ctttcctg-tg----at-----------gcCCC-CA-------TGCAT--ATA-----------------------------ATG---AATTTGTATA
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         2352 28 +     11805 ----tatt-ca-cttt--t---ctttcctg-tg----at-----------gcccc-----------------------------------------------------------------
i Propithecus_coronatus.k141_1353159                    C 0 I 22
s Propithecus_diadema.k141_577245                           41687 51 +     52369 ----tatt-ca-cttt--t---ctttcctg-tg----at-----------gcccc-ca-------tgcat--ata-----------------------------atg---aatttgtata
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         34077 51 -     44753 ----tatt-ca-cttt--t---ctttcctg-tg----at-----------gcccc-ca-------tgcat--ata-----------------------------atg---aatttgtata
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            15997 51 +     27322 ----tatt-ca-cttt--t---ctttcctg-tg----at-----------gcccc-ca-------tgcat--ata-----------------------------atg---aatttgtata
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       15633 51 -     53241 ----tatt-ca-cttt--t---ctttcctg-tg----at-----------gcccc-ca-------tgcat--ata-----------------------------ata---aatttatata
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         37905 51 -     48185 ----tatt-ca-cttt--t---ctttcctg-tg----at-----------gcccc-ca-------tgcat--ata-----------------------------atg---aatttgtata
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           32081 21 +     77221 ------------TTT---T---CTTTGCTG-CA----TT-----------T-TGC-T---------------------------------------------------------------
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pygathrix_cinerea.k141_374971                             28625 55 +     56732 TTTACATC-CA-ATTT--T---CTTTCctg-tg----at-----------tcccc-ca-------tgcgt--gta-----------------------------ata---aatgtgtata
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6805116 55 +   6970761 TTTACATC-CA-ATTT--T---CTTTCctg-tg----at-----------tcccc-ca-------tgcgt--gta-----------------------------ata---aatgtgtata
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             4510 55 +     18040 TTTACATC-CA-ATTT--T---CTTTCctg-tg----at-----------tcccc-ca-------tgcgt--gta-----------------------------ata---aatgtgtata
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rattus_norvegicus.chr11                                13914110 21 +  90463843 ------------TTT---T---CTTCCCTG-TC----TT-----------G-TGC-C---------------------------------------------------------------
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinopithecus_bieti.k119_1391695                            738 55 -      1866 ttTACATC-CA-ATTT--T---CTTTCctg-tg----at-----------tcccc-ca-------tgcgt--gta-----------------------------ata---aatgtgtata
i Rhinopithecus_bieti.k119_1391695                      C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206376395 55 - 206558726 tttacatc-cA-ATTT--T---CTTTCCTG-TG----AT-----------TCCCC-CA-------TGCGT--GTA-----------------------------ATA---AATGTGTATA
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44855295 55 -  45163003 ttTACATC-CA-ATTT--T---CTTTCctg-tg----at-----------tcccc-ca-------tgcgt--gta-----------------------------ata---aatgtgtata
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15671474 53 -  43202129 --tgcatc-ca-CTTT--T---CTTTCCCA-TG----AT-----------CCCCC-TG-------TGCAT--GCA-----------------------------ATA---AATGTGTATA
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        3391 53 +     34089 --TGCATC-CA-CTTT--T---ctttcccg-tg----at-----------ccccc-tg-------tgcat--gca-----------------------------ata---aatgtgtata
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              3332 53 -     60842 --TGCATC-CA-CTTT--T---ctttcccg-tg----at-----------ccccc-tg-------tgcat--gca-----------------------------ata---aatgtgtata
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              3427 53 +     67014 --TGCATC-CA-CTTT--T---ctttcccg-tg----at-----------ccccc-tg-------tgcat--gca-----------------------------ata---aatgtgtata
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              3405 53 +     60816 --TGCATC-CA-CTTT--T---ctttcccg-tg----at-----------ccccc-tg-------tgcat--gca-----------------------------ata---aatgtgtata
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 3342 53 -     76454 --TGCATC-CA-CTTT--T---ctttcccg-tg----at-----------ccccc-tg-------tgcat--gca-----------------------------ata---aatgtgtata
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17340066 52 -  30362882 --tgCATC-CA-CTTt--t---ctttcctg-tg----at------------cccc-tg-------tgcat--gta-----------------------------ata---aatgtgtatg
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         19425 52 -     62485 --tgCATC-CA-CTTt--t---ctttcctg-tg----at------------cccc-tg-------tgcat--gta-----------------------------ata---aatgtgtatg
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Semnopithecus_entellus.k141_1572367                        2122 55 +     15331 tttacatc-ca-attt--t---ctttcctg-tg----at-----------tcccc-ca-------tgcat--gta-----------------------------ata---aatgtgtaca
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       7519 55 +     20762 tttacatc-ca-attt--t---ctttcctg-tg----at-----------tcccc-ca-------tgcat--gta-----------------------------ata---aatgtgtaca
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         117517 55 +    130994 tttacatc-ca-attt--t---ctttcctg-tg----at-----------tcccc-ca-------tgcat--gta-----------------------------ata---aatgtgtaca
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           36308 55 +     46263 tttacatc-ca-attt--t---ctttcctg-tg----at-----------tcccc-ca-------tgcat--gta-----------------------------ata---aatgtgtaca
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     29422 55 +     42640 tttacatc-ca-attt--t---ctttcctg-tg----at-----------tcccc-ca-------tgcat--gta-----------------------------ata---aatgtgtaca
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        12466 55 +     30600 tttacatc-ca-attt--t---ctttcctg-tg----at-----------tcccc-ca-------tgcat--gta-----------------------------ata---aatgtgtaca
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   98375 21 -    120886 ------------TTT---T---GTTTCTTG-GG----AT-----------A-TTC-T---------------------------------------------------------------
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2238651  1 +   2842873 -------------t----------------------------------------------------------------------------------------------------------
i Spermophilus_dauricus.KZ294190.1                      C 0 I 2
s Symphalangus_syndactylus.tarseq_24                        13680 55 -  13920577 TTtgcatc-ca-cttt--t---ctttcctg-tg----at-----------ttccc-ca-------tgcgt--gta-----------------------------ata---aatgtgtaca
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tarsius_lariang.k141_609102                               25214 28 +     42269 ----tatt-ca-ctta--t---ctttcctg-tg----at-----------gctca-----------------------------------------------------------------
i Tarsius_lariang.k141_609102                           C 0 I 22
s Tarsius_wallacei.k141_48636                               58530 28 +     65473 ----tatt-ca-ctta--t---ctttcctg-tg----at-----------gctca-----------------------------------------------------------------
i Tarsius_wallacei.k141_48636                           C 0 I 22
s Theropithecus_gelada.CM009951.1                       194006527 55 - 194193292 tttacatc-cA-ATTT--T---CTTTCCTG-TG----AT-----------TCCCC-CA-------TGCAT--GTA-----------------------------ATA---AATGTGTATA
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             38042 46 -     47444 ----------acctt---t---ctttcctg-tgatggc----------------ctct-------cacac--aaa-----------------------------aca---aatgtgttta
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Trachypithecus_auratus.k141_738098                        25629 55 +     38948 tttacatc-ca-attt--t---ctttcctg-tg----at-----------tcccc-ca-------tgcat--gta-----------------------------ata---aatgtgtaca
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   19356 55 -     32910 ttTACATC-CA-ATTT--T---ctttcctg-tg----at-----------tcccc-ca-------tgcat--gta-----------------------------ata---aatgtgtaca
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                       743 55 -     12939 tttacatc-ca-attt--t---ctttcctg-tg----at-----------tcccc-ca-------tgcat--gta-----------------------------ata---aatgtgtaca
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                        678 55 -     14244 tttacatc-ca-attt--t---ctttcctg-tg----at-----------tcccc-ca-------tgcat--gta-----------------------------ata---aatgtgtaca
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           42076 55 -     54611 tttacatc-ca-attt--t---ctttcctg-tg----at-----------tcccc-ca-------tgcat--gta-----------------------------ata---aatgtgtaca
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_878600                         906 55 +      1165 tttacatc-ca-attt--t---ctttcctg-cg----at-----------tcccc-ca-------tgcat--gta-----------------------------ata---aatgtgtaca
i Trachypithecus_germaini.k141_878600                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     2054 55 -     15592 tttacatc-ca-attt--t---ctttcctg-tg----at-----------tcccc-ca-------tgcat--gta-----------------------------ata---aatgtgtaca
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                           711 55 +     14371 tttacatc-ca-attt--t---ctttcctg-tg----at-----------tcccc-ca-------tgcat--gta-----------------------------ata---aatgtgtaca
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  50463 55 +     51589 tttacatc-ca-attt--t---ctttcctg-tg----at-----------tcccc-ca-------tgcat--gta-----------------------------ata---aatgtgtaca
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       13644 55 +     14732 tttacatc-ca-attt--t---ctttcctg-tg----at-----------tcccc-ca-------tgcat--gta-----------------------------ata---aatgtgtaca
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       4116 55 -     28054 tttacatc-ca-attt--t---ctttcctg-tg----at-----------tcccc-ca-------tgcat--gta-----------------------------ata---aatgtgtaca
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44658916 55 -  44834318 tttacatc-ca-attt--t---ctttcctg-tg----at-----------tcccc-ca-------tgcat--gta-----------------------------ata---aatgtgtaca
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       1219 55 +     13828 tttacatc-ca-attt--t---ctttcctg-tg----at-----------tcccc-ca-------tgcat--gta-----------------------------ata---aatgtgtaca
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tupaia_chinensis.KB320831.1                             2791553 24 -   3938065 -----AGG-AG-CTTA--T---TTTTTTTG-CG----AT-----------AC--------------------------------------------------------------------
i Tupaia_chinensis.KB320831.1                           C 0 I 14
s Tupaia_tana.TupTan_flattened_line_68454                    3810 35 +     13056 -----agt-ac-ttac--t---ttcttttg-cg----atgccttatacatat--------------------------------------------------------------------
i Tupaia_tana.TupTan_flattened_line_68454               C 0 I 14
s Varecia_rubra.k141_432109                                  4009 51 -     20643 ----tatt-ca-cttt--t---ctttccta-tg----at-----------gcccc-ca-------cacat--ata-----------------------------atg---aatttgtata
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             23550 51 -     33872 ----tatt-ca-cttt--t---ctttccta-tg----at-----------gcccc-ca-------cacat--ata-----------------------------atg---aatttgtata
i Varecia_variegata.k141_775891                         C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       125751  1 -    134049 -------------T----------------------------------------------------------------------------------------------------------
i Xerus_inauris.XerIna_scaffold_7898                    C 0 I 2
s Zapus_hudsonius.ZapHud_scaffold_64392                     13979 42 -     20485 ----------t-tca---tttcttttcctg-tg----at-----------gctgt-cg-------tgcac--atc-----------------------------aca---aata------
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 I 8
e Eptesicus_fuscus.JH977687.1                             4702143 415 +   6522550 I
e Macroglossus_sobrinus.MacSob_scaffold_879                699974 431 +    802869 I
e Sorex_araneus.JH798170.1                               17748590 843 -  27805282 I
e Dinomys_branickii.DinBra_scaffold_1996                   156356 54 +    228994 I
e Erinaceus_europaeus.JH835290.1                         11530833 462 +  16010500 I
e Chaetophractus_vellerosus.ChaVel_scaffold_1070855          1230  0 -      1715 I
e Suricata_suricatta.SurSur_flattened_line_20339            25319 430 +     62062 I
e Ziphius_cavirostris.ZipCav_flattened_line_127025           5301 442 -      8775 I
e Zalophus_californianus.ZalCal_flattened_line_4097        212018 448 -    227762 I
e Vulpes_lagopus.VulLag_flattened_line_2045                135489 449 -    281493 I
e Vicugna_pacos.KN269600.1                                1523037 433 -   2331223 I
e Ursus_maritimus.KK498671.1                              6512543 460 +  28682327 I
e Uropsilus_gracilis.UroGra_scaffold_4143_0                 24925  0 -     25548 I
e Tursiops_truncatus.MRVK01000923.1                      69311805 441 -  96451834 I
e Trichechus_manatus.JH594618.1                          16079679 1700 +  31416278 I
e Tragulus_javanicus.TraJav_scaffold_14717                   3584 419 +     90398 I
e Tonatia_saurophila.TonSau_scaffold_3334                  134241 421 -    259118 I
e Tolypeutes_matacus.TolMat_scaffold_269431                  1990 2406 +      6782 I
e Tapirus_terrestris.TapTer_scaffold_14939                  55756 434 +     99546 I
e Tapirus_indicus.TapInd_scaffold_176                      805095 435 +   1148477 I
e Tamandua_tetradactyla.TamTet_scaffold_26877               13106 433 +     45698 I
e Tadarida_brasiliensis.TadBra_scaffold_145589               4174 407 -      6213 I
e Sus_scrofa.CM000824.4                                 189270228 447 + 218635234 I
e Spilogale_gracilis.SpiGra_flattened_line_905             232751 445 -    276980 I
e Solenodon_paradoxus.SolPar_flattened_line_1012            16376 416 +    739146 I
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   29737 434 -    114521 I
e Saiga_tatarica.SaiTat_scaffold_82192                       5983 428 +     12214 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                17647 435 +    109198 I
e Rhinolophus_sinicus.LVEH01000179.1                      1786172 430 +   2252614 I
e Rangifer_tarandus.RanTarSib_scaffold_24239                14178 431 +     68503 I
e Puma_concolor.QAVW01000427.1                          131532079 431 - 161321710 I
e Pteropus_vampyrus.KN525959.1                             602305 437 -   3946241 I
e Pteropus_alecto.KB031157.1                             13244354 438 -  17261082 I
e Pteronura_brasiliensis.PteBra_flattened_line_1343        243991 454 -    344369 I
e Pteronotus_parnellii.KE867983.1                            2230 422 -     27784 I
e Procavia_capensis.ProCapCap_scaffold_15315                74302 1939 +     78963 I
e Platanista_gangetica.PlaMin_flattened_line_72990           3771 443 +     21690 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            95224 410 +    112873 I
e Phocoena_phocoena.PhoPho_flattened_line_11948            119703 443 -    122454 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113416 447 -    135482 I
e Pantholops_hodgsonii.KE114631.1                         1064538 417 -   1292953 I
e Panthera_tigris.KE721879.1                              5025497 431 -   6340057 I
e Panthera_pardus.KV860323.1                              3635849 432 +  18214204 I
e Panthera_onca.PanOnc_flattened_line_1615                  32116 431 +    295523 I
e Ovis_canadensis.OviCan_scaffold_6251                      76891 417 +    140051 I
e Ovis_aries.CM001582.2                                 134075677 417 - 275406953 I
e Otocyon_megalotis.JAEUCK010005121.1                      305421 444 -    505867 I
e Orycteropus_afer.OryAfe_flattened_line_13509              41471 1764 -     66828 I
e Orcinus_orca.KB316965.1                                 7223086 443 -   7562323 I
e Okapia_johnstoni.LVCL01S0017931.1                         35255 573 +     78940 I
e Odocoileus_virginianus.KZ101650.1                       1078100 432 +   1425656 I
e Odobenus_rosmarus.KB229369.1                             677288 443 -   3126709 I
e Nyctereutes_procyonoides.CAJHUB010000786.1                28082 449 +   3668941 I
e Noctilio_leporinus.NocLep_scaffold_12062                  47676 415 +     94413 I
e Neophocaena_asiaeorientalis.KZ688543.1                  3949402 443 -   4490290 I
e Neomonachus_schauinslandi.NINY01007774.1                4482632 454 -  14209539 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3432 432 -      8794 I
e Myotis_myotis.MyoMyo_scaffold_6123                         8554 416 +     66751 I
e Myotis_lucifugus.GL429887.1                             3463359 417 -   3747815 I
e Myotis_davidii.KB114863.1                               5017463 416 +   6462685 I
e Myotis_brandtii.KE161952.1                               965772 418 +   8389877 I
e Mustela_putorius.JH417978.1                             4421898 453 -  28371801 I
e Murina_feae.MurFea_scaffold_2254                          17451 414 -    100666 I
e Mungos_mungo.MunMun_flattened_line_8729                  142653 430 -    168139 I
e Moschus_moschiferus.MosMos_scaffold_146101                 2972 432 -      4346 I
e Mormoops_blainvillei.MorMeg_scaffold_2952                159560 424 +    265003 I
e Monodon_monoceros.MonMon_M_scaffold_5598                 144790 442 +    154973 I
e Mirounga_angustirostris.MirAng_flattened_line_8852         9033 661 -    104932 I
e Miniopterus_schreibersii.MinSch_scaffold_24116            32480 421 +     45743 I
e Miniopterus_natalensis.LDJU01000022.1                   8207809 420 +  10048721 I
e Micronycteris_hirsuta.MicHir_scaffold_37978               21050 428 -     32043 I
e Microgale_talazaci.MicTal_scaffold_34660                  29351 1133 -     48017 I
e Mellivora_capensis.MelCap_flattened_line_146202             327 452 -      1999 I
e Megaderma_lyra.MegLyr_scaffold_3562                       62628 576 -    234502 I
e Manis_pentadactyla.KN017078.1                             34538 441 +     58827 I
e Manis_javanica.JSZB01003966.1                            144466 438 +    252755 I
e Lycaon_pictus.CM007556.1                               11085089 449 +  39895028 I
e Loxodonta_africana.GL010040.1                          20589215 1702 -  62548349 I
e Lipotes_vexillifer.KE558548.1                            134353 444 +   3060487 I
e Leptonychotes_weddellii.KB714749.1                      3083728 458 -   3498232 I
e Lasiurus_borealis.LasBor_scaffold_5102                   111937 417 -    115756 I
e Kogia_breviceps.KogBre_flattened_line_35920               22021 443 +     37189 I
e Inia_geoffrensis.IniGeo_flattened_line_66725               7195 437 +     17520 I
e Hyaena_hyaena.HyaHya_flattened_line_20729                 14013 474 -     67322 I
e Hipposideros_galeritus.HipGal_scaffold_104691              5946 409 -      9143 I
e Hipposideros_armiger.JXIK01001085.1                      276788 408 -    477199 I
e Hippopotamus_amphibius.HipAmp_scaffold_1308              145449 430 +    277961 I
e Heterohyrax_brucei.HetBruBak_scaffold_25354               54438 1939 +     73687 I
e Hemitragus_hylocrius.HemHyl_scaffold_16669                25884 416 -     91191 I
e Helogale_parvula.HelPar_flattened_line_22962              14960 432 +     53719 I
e Giraffa_tippelskirchi.LVKQ01S012154.1                    179385 717 -    189561 I
e Felis_nigripes.FelNig_flattened_line_8080                 18925 427 +     52776 I
e Felis_catus_fca126.CM031420.1                         129277790 427 - 158578461 I
e Eubalaena_japonica.EubJap_flattened_line_7756             59838 466 +     89355 I
e Eschrichtius_robustus.EscRob_flattened_line_685          313408 442 +    330699 I
e Equus_przewalskii.ATBW01073585.1                          11036 704 +     92910 I
e Equus_caballus.CM000402.2                              13349546 704 +  41866177 I
e Equus_asinus.JREZ01000062.1                             5851044 703 -   7175178 I
e Enhydra_lutris.KZ291749.1                              85869516 453 +  99434291 I
e Elephantulus_edwardii.JH947210.1                        7804622 10712 +  15467074 I
e Elaphurus_davidianus.JRFZ01086400.1                     1489870 432 +   1727528 I
e Eidolon_helvum.KE772537.1                                 10556 435 +     24177 I
e Echinops_telfairi.JH980316.1                           22994071  0 -  44670279 C
e Diceros_bicornis.DicBicMic_scaffold_9545                    953 1024 +    151128 I
e Dicerorhinus_sumatrensis.PEKH010003161.1                 320309 1016 +    993696 I
e Desmodus_rotundus.KZ672188.1                           18697183 419 -  18957592 I
e Delphinapterus_leucas.KZ290064.1                       80035206 438 -  96802777 I
e Dasypus_novemcinctus.JH568778.1                          180040 2424 -   6883506 I
e Cryptoprocta_ferox.CryFer_flattened_line_19014            49751 433 -     70449 I
e Crocidura_indochinensis.CroInd_scaffold_38409             18067 408 -     19186 I
e Craseonycteris_thonglongyai.CraTho_scaffold_22679         37588 826 -     40477 I
e Condylura_cristata.JH655880.1                          60611131 297 +  78930452 I
e Choloepus_hoffmanni.KN194586.1                           760141 439 +    964067 I
e Choloepus_didactylus.ChoDid_scaffold_36182                14830 439 -     21363 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_160623         1406 1024 -      9338 I
e Catagonus_wagneri.CatWag_scaffold_1305                   157166 412 -    276539 I
e Carollia_perspicillata.CarPer_scaffold_4436               57873 420 +     67245 I
e Capra_hircus.CM004562.1                               135704839 417 - 157403528 I
e Capra_aegagrus.CM003214.1                              21323612 417 + 157394656 I
e Canis_lupus_orion.HG994411.1                           16452657 449 -  44759192 I
e Canis_lupus_familiaris.chr31                           11085633 449 +  39895921 I
e Canis_lupus_dingo.QKWQ01001993.1                       11263104 449 -  35597290 I
e Canis_lupus_VD.CanFam_VD_scaffold_16982                   11461 449 +     87036 I
e CanFam4.chr31                                          11516443 449 +  39901454 I
e Camelus_ferus.KB016973.1                                2971365 436 +   6889770 I
e Camelus_dromedarius.KN271192.1                           395631 437 -  15254737 I
e Camelus_bactrianus.KN276303.1                           3217927 436 -   8989139 I
e Bubalus_bubalis.KI419065.1                              1229342 431 -   1914593 I
e Bos_taurus.CM000177.6                                 136293586 432 - 158972876 I
e Bos_mutus.JH883513.1                                     570227 432 -    998990 I
e Bos_indicus.CM003021.1                                138137853 432 - 161108492 I
e Bison_bison.KN264915.1                                  6557614 432 +   6870073 I
e Beatragus_hunteri.BeaHun_scaffold_21644                   41603 412 -     72089 I
e Balaenoptera_bonaerensis.DF502048.1                        3753 444 -     13118 I
e Balaenoptera_acutorostrata.KI537095.1                  26378522 443 +  51448160 I
e Artibeus_jamaicensis.ArtJam_scaffold_41619                 7075 421 -     29036 I
e Antilocapra_americana.AntAmePen_scaffold_42841            29107 427 +     33004 I
e Anoura_caudifer.AnoCau_scaffold_422                      388679 416 -    631301 I
e Ammotragus_lervia.NIVO01013474.1                        3518508 445 +   4113121 I
e Ailurus_fulgens.LNAC01000003.1                          7091784 657 -  16596857 I
e Ailuropoda_melanoleuca.LNAT01000321.1                  10655057 459 +  23371972 I
e Acinonyx_jubatus.LLWD01000356.1                         2031739 430 +   3721120 I
e Hylobates_pileatus_a.tarseq_592                             33311  5 -     60944 I
e Ellobius_lutescens.LOEQ01003611.1                        238324 20 -    369425 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               10722 53 +    209709 ca-------ttt--------tcttcttttgacat-gc-ctgttat----------ccatttattc--aata--gac-----------------tc--agttat
s Acomys_cahirinus.AcoCah_scaffold_1625                    111097 31 -    189883 ---------------------------------------TCCTCT----------TGTCTTATCA--TGTG--GGC-----------------TG--GGTCAC
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   11768 34 -     22067 --------------------------------------ctactgt----------cagtttTTTACATATA--GAT-----------------GC--ATTCAC
i Allactaga_bullata.AllBul_scaffold_70162               I 59 C 0
s Allenopithecus_nigroviridis.k141_3103728                   1324 53 +      1665 cc-------ttt--------tcttctttcgacgt-gc-ctgttat----------ccgtttattt--cata--gac-----------------tc--agttat
i Allenopithecus_nigroviridis.k141_3103728              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                          800 53 -     29318 cc-------ttt--------tcttctttcgacgt-gc-ctgttat----------ccgtttattt--cata--gac-----------------tc--agttat
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_21781                            938 53 +      1343 cc-------ttt--------tcttctttcgacat-gc-ctgttat----------ccgtttattt--cata--gac-----------------tc--agttat
i Allochrocebus_preussi.k141_21781                      C 0 I 200
s Allochrocebus_solatus.k141_371672                           694 53 -     80423 cc-------ttt--------tcttctttcgacgt-gc-ctgttat----------ccgtttattt--cata--gac-----------------tc--agttat
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             8978 61 -     18050 cc-------ttgaaagtaaatgtgcttttgatat-gt-ctgttat----------ccatttattt--cata--gaa-----------------tc--agttat
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                 10091 57 -     11521 CC-------TTGAAAGTAAATGTGCTTTTGATAT-GT-CTGTTAT----------CCATTTATTT--CATA--GAA-----------------TC--AG----
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              9655 61 -     21359 cc-------ttgaaagtaaatgtgcttttgatat-gt-ctgttat----------ccatttattt--cata--gaa-----------------tc--agttat
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1029606                                 914 61 -      1200 CC-------TTGAAAGTAAATGTGCTTTTGATAT-GT-CTGTTAT----------CCATTTATTT--CATA--GAA-----------------TC--AGTTAT
i Alouatta_juara.k141_1029606                           I 472 I 13
s Alouatta_macconnelli.k141_1331706                          8951 61 -     10438 cc-------ttgaaagtaaatgtgcttttgatat-gt-ctgttat----------ccatttattt--cata--gaa-----------------tc--agttat
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            5607 61 +      7047 cc-------ttgaaagtaaatgtgcttttgatat-gt-ctgttat----------ccatttattt--cata--gaa-----------------tc--agttat
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             8887 61 +     10410 cc-------ttgaaagtaaatgtgcttttgatat-gt-ctgttat----------ccatttattt--cata--gaa-----------------tc--agttat
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            2697 61 -      4927 cc-------ttgaaagtaaatgtgcttttgatat-gt-ctgttat----------ccatttattt--cata--gaa-----------------tc--agttat
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             5626 61 +      6429 cc-------ttgaaagtaaatgtgcttttgatat-gt-ctgttat----------ccatttattt--cata--gaa-----------------tc--agttat
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Aotus_azarae.k141_3170768                                 61343 53 +     78111 cc-------ttt--------cattcttttcatat-gc-ctgttat----------ccatttattt--cgta--gag-----------------tc--agttat
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            4284 53 +     22701 cc-------ttt--------cattcttttcatat-gc-ctgttat----------ccatttattt--cgta--gag-----------------tc--agttat
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5748241 53 +   9889416 CC-------TTT--------Cattcttttcatat-gc-ctgttat----------CCATTTATTT--CGTA--GAG-----------------TC--AGTTAT
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             4826 53 -    104377 cc-------ttt--------cattcttttcatat-gc-ctgttat----------ccatttattt--cgta--gag-----------------tc--agttat
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               4832 53 +     23246 cc-------ttt--------cattcttttcatat-gc-ctgttat----------ccatttattt--cgta--gag-----------------tc--agttat
i Aotus_vociferans.k141_718647                          C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      16635 54 +     17483 GA-------TTT--------TCTCCTTTTAATCGAAT-CTTGTAT----------CAGTTTACTT--CATA--GAC-----------------TA--AGTTAT
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9538083 61 +  39197703 cc-------ttgaaagtaaatgtgcttttgatat-gc-ctgttat----------ccatttattt--cata--gaa-----------------tc--agttgt
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             59354 61 +     85812 CC-------TTGAAAGTAAATGTGCTTTTGATAT-GC-CTGTTAT----------CCATTTATTT--CATA--GAA-----------------TC--AGTTGT
i Ateles_belzebuth.k141_1348307                         I 19 C 0
s Ateles_chamek.k141_1072810                                10366 61 +     89302 cc-------ttgaaagtaaatgtgcttttgatat-gc-ctgttat----------ccatttattt--cata--gaa-----------------tc--agttgt
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             14871 61 -     58268 cc-------ttgaaagtaaatgtgcttttgatat-gc-ctgttat----------ccatttattt--cata--gaa-----------------tc--agttgt
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             62862 61 +    119057 cc-------ttgaaagtaaatgtgcttttgatat-gc-ctgttat----------ccatttattt--cata--gaa-----------------tc--agttgt
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               4831 61 -     25888 cc-------ttgaaagtaaatgtgcttttgatat-gc-ctgttat----------ccatttattt--cata--gaa-----------------tc--agttgt
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 5473 53 -     16375 cc-------ttt--------tctccttttaatct-ac-ctgttat----------cagtttattt--tcta--gac-----------------tc--ggttat
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              1793 53 +      2719 cc-------ttt--------tctccttttaatct-ac-ctgttat----------cagtttattt--tcta--gac-----------------tc--ggttat
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Cacajao_ayresi.k141_724503                               112732 53 -    171031 cc-------ttt--------cattcttttgatat-gc-ctgttat----------ccatttactt--cata--gag-----------------tc--agtcat
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 11760 53 +    125063 cc-------ttt--------ccttcttttgatat-gc-ctgttat----------ccatttactt--cata--gag-----------------tc--agtcat
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                13805 53 -    216513 cc-------ttt--------ccttcttttgatat-gc-ctgttat----------ccatttactt--cata--gag-----------------tc--agtcat
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        6345 53 -    134917 cc-------ttt--------ccttcttttgatat-gc-ctgttat----------ccatttactt--cata--gag-----------------tc--agtcat
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Capromys_pilorides.CapPil_scaffold_979108                   740 52 -      1248 tc-------ttt--------cctcctgttaatct-cc-ctattct----------tggc-aattc--catt--ggc-----------------tt--agttgt
i Capromys_pilorides.CapPil_scaffold_979108             C 0 C 0
s Carlito_syrichta.NW_007248099.1                          307780 53 +    345090 ct-------ttt--------tcttctttcaatct-GC-CTGATAA----------CAGTTTATTT--CATA--GAC-----------------TC--AGTTAC
i Carlito_syrichta.NW_007248099.1                       I 22 C 0
s Castor_canadensis.CasCan_scaffold_47037                   29453 45 +     33760 -----------------------CTAAttaattt-gt-ctgggaa----------cagtgtattt--cata--ggc-----------------tc--agttat
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15785388 53 -  24422027 TC-------TTT--------CCTCCTGTCNNNNN-NN-NNNNNNN----------NNNNNNNNNN--NNNN--NNN-----------------NN--NNNNNN
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15797322 53 -  24440124 tc-------ttt--------cctcctgtcaatct-gc-ctgttat----------tggtttattc--tgtt--ggc-----------------tc--agtttt
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       175513 53 +    436027 tc-------ttt--------cctcctgtcaatct-gc-ctgttat----------tggtttattc--tgtt--ggc-----------------tc--agtttt
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18889575 53 -  29618158 cc-------ttt--------cattcttttgatat-gc-ctgttat----------ccatttattt--cata--gag-----------------tc--agttat
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 7119 53 -     26817 cc-------ttt--------cattcttttgatat-gc-ctgttat----------ccatttattt--cata--gag-----------------tc--agttat
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                11359 53 +     25043 cc-------ttt--------cattcttttgatat-gc-ctgttat----------ccatttattt--cata--gag-----------------tc--agttat
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         6813 53 +     21754 ct-------ttt--------tcttcttttaatct-gc-ctgataa----------cagtttattt--cata--gac-----------------tc--agttac
i Cephalopachus_bancanus.k141_702587                    I 22 C 0
s Cercocebus_atys.KQ010443.1                              6554016 53 +   6739814 cc-------ttt--------tcttctttcgacag-gc-ctgttat----------ccgtttattt--cata--gac-----------------tc--agttat
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      25493 53 +     60454 cc-------ttt--------tcttctttcgacag-gc-ctgttgt----------ccgtttattt--cata--gac-----------------tc--agttat
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                           698 53 -     21101 cc-------ttt--------tcttctttcgacag-gc-ctgttat----------ccgtttattt--cata--gac-----------------tc--agttat
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         58008 53 -    107033 cc-------ttt--------tcttctttcgacag-gc-ctgttat----------ccgtttattt--cata--gac-----------------tc--agttat
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                         900 53 -     17608 cc-------ttt--------tcttccttcgacag-gc-ctgttat----------ccgtttattt--cata--gac-----------------tc--agttat
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          28398 53 +     30494 cc-------ttt--------tcttctttcgacgt-gc-ctgttat----------ccgtttattt--cata--gac-----------------tc--agttat
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          57241 53 -     59240 cc-------ttt--------tcttctttcgacgt-gc-ctgttat----------ccgtttattt--cata--gac-----------------tc--agttat
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                           942 53 +     16677 cc-------ttt--------tcttctttcgacag-gc-ctgttat----------ccatttattt--cata--gac-----------------tc--agtgat
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           23100 53 +     35983 cc-------ttt--------tcttctttcaacag-gc-ctgttat----------ccgtttattt--cata--gac-----------------tc--agttat
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11989631 53 +  12117833 cc-------ttt--------tcttctttcgacgt-gc-ctgttat----------ccgtttattt--cata--gac-----------------tc--agttat
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46476386 53 +  46592721 cc-------ttt--------tcttctttcaacag-gc-ctgttat----------ccgtttattt--cata--gac-----------------tc--agttat
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      39937 53 -     45581 cc-------ttt--------tcttctttcgacag-gc-ctgttat----------ccgtttattt--cata--gac-----------------tc--agttat
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                        946 53 +     35577 cc-------ttt--------tcttctttcgacgt-gc-ctgttat----------ccgtttattt--cata--gac-----------------tc--agttat
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                         719 53 -     25661 cc-------ttt--------tcttctttcgacag-gc-ctgttat----------ccgtttattt--cata--gac-----------------tc--agttat
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                         697 53 -     17744 cc-------ttt--------tcttctttcgacag-gc-ctgttat----------ccgtttattt--cata--gac-----------------tc--agttat
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        20306 53 +     37128 cc-------ttt--------tcttctttcgacgt-gc-ctgttat----------ccgtttattt--cata--gac-----------------tc--agttat
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           57767 53 -     68416 cc-------ttt--------tctccttttaattg-ac-ctgttat----------cagtttatta--cata--cat-----------------tc--agttat
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            6810 53 +     13308 cc-------ttt--------tctccttttaattg-ac-ctattat----------cagtttatta--cata--cat-----------------tc--agttat
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             4375 53 -     18223 cc-------ttt--------cattcttttgatat-gc-ctgttat----------ccatttattt--cata--gag-----------------tc--agtcat
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             21398 53 +     25473 cc-------ttt--------cattcttttgatat-gc-ctgttat----------ccatttattt--cata--gag-----------------tc--agtcgt
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           40433 53 +     57117 cc-------ttt--------cattcttttgatat-gc-ctgttat----------ccatttattt--cata--gag-----------------tc--agtcat
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          45112 53 +     54541 cc-------ttt--------cattcttttgatat-gc-ctgttat----------ccatttattt--cata--gag-----------------tc--agtcgt
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15960533 53 +  43084221 tc-------ttt--------tctcctgtcgatct-gc-cggttct----------tccttgattc--catt--ggc-----------------tc--agttat
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         69934 53 +    196370 cc-------ttt--------ccttcttttgatat-gc-ctgttat----------ccatttattt--cata--gag-----------------tc--agtcat
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          14114 53 +     40510 cc-------ttt--------ccttcttttgatat-gc-ctgttat----------ccatttattt--cata--gag-----------------tc--agtcat
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15137860 53 -  15256731 cc-------ttt--------tcttctttcgacgt-gc-ctgttat----------ccgtttattt--cata--gac-----------------tc--agttat
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      32907 53 -     53260 cc-------ttt--------tcttctttcgacat-gc-ctgttat----------ccgtttattt--cata--gac-----------------tc--agttat
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101143470 53 + 101219884 CC-------TTT--------TCTTCTTTCGACAT-GC-CTGTTAT----------CCGTTTATTT--CATA--GAC-----------------TC--AGTTAT
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10885235 53 +  10971483 tc-------ttt--------tcttctttcgaCGT-GC-CTGTTAT----------CCGTTTATTT--CATA--GAC-----------------TC--AGTTAT
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147663399 53 + 156195979 tc-------ttt--------tcttctttcgacgt-gc-ctgttat----------ccgtttattt--cata--gac-----------------tc--agttat
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            15383 53 +     23629 cc-------ttt--------tcttcttccgacat-gc-ctgttat----------ccgtttattt--cata--gac-----------------tc--agttat
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 277063 31 -    399297 ---------------------------------------TCCTGT----------CAGCTTATCA--TATA--GCC-----------------TG--TGTCAT
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53027749 31 +  72327488 ---------------------------------------TCCTGT----------CAGTTTTTCA--CATC--AGC-----------------TG--GGTCCT
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  206950 47 -    956709 cc-------tct--------t--catcttaatct-gc-ctatgat----------gagt----tt--cata--tgt-----------------tc--agattt
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 29501 53 -     67205 tc-------ttt--------ccttctgtcaatct-gc-ctgctct----------tggtttattc--caat--ggc-----------------tt--agatat
i Ctenomys_sociabilis.CteSoc_scaffold_19489             I 19 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                16541 53 +     26546 tc-------ttt--------cttcctgtcaatct-gc-ctgttac----------tggtttattc--cctt--ggc-----------------tc--agttat
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             57633 53 -    236241 tt-------ttt--------cctcccttcaatct-gc-ctgttaa----------ccatttattc--cctt--ggc-----------------tc--agttat
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16843620 53 +  31942871 cc-------ttt--------tctccttttaatct-ac-ctgttat----------cagtttattt--cata--gat-----------------tc--agttat
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Dipodomys_ordii.KN672545.1                              3654965 51 +   4240102 CT-------TTG--------TCTACTGCTAATCT-GC-CTGTGGA----------GTGTATATTA--TACA--GGT-----------------TG--TG--AG
i Dipodomys_ordii.KN672545.1                            C 0 I 2
s Dipodomys_stephensi.DipSte_scaffold_44365                 26601 51 +     28912 CT-------TTG--------TCTACTGCTAATCT-GC-CTGTTGA----------GTGTATATTA--TACA--GGC-----------------TG--TG--AG
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 I 2
s Dolichotis_patagonum.DolPat_scaffold_14102                34879 53 -     73477 tc-------tgt--------cctcctgtcaatct-gc-ctgttat----------tggtttattc--cact--ggc-----------------tc--aatttt
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           5417 31 -      7838 ---------------------------------------ttctg-tcagtttatc---------a--catc--agc-----------------cg--gagcct
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Erythrocebus_patas.Contig8                             48770040 53 -  48907691 cc-------ttt--------tcttctttcgacat-gc-ctgttat----------ccgtttattt--cata--gac-----------------tc--agttat
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eulemur_albifrons.k141_715837                              3815 49 +     13586 cc-------ttt--------tctccttttaatcg-ac-ctgttat----------cag----ttt--cata--gac-----------------tc--ggttat
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               3748 53 -      6809 cc-------ttt--------tctccttttaatca-ac-ctgttat----------cagtttgttt--cata--gac-----------------tc--ggttat
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            10224 53 +     36558 cc-------ttt--------tctccttttaatcg-ac-ctgttat----------cagtttattt--cata--gac-----------------tc--ggttat
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             6540 53 +     60246 cc-------ttt--------tctccttttaatca-ac-ctgttat----------cagtttattt--cata--gac-----------------tc--ggttat
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                10023 49 +    109717 cc-------ttt--------tctccttttaatca-ac-ctgttat----------cag----ttt--cata--gac-----------------tc--ggttat
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               14402 53 +     16540 cc-------ttt--------tctccttttaatca-ac-ctgttat----------cagtttattt--cata--gac-----------------tc--ggttat
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                14675 53 +     27497 cc-------ttt--------tctccttttaatcg-ac-ctgttat----------cagtttattt--cata--gac-----------------tc--ggttat
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           17134 52 +     26808 cc-------ttt--------tctccttttaattg-ac-ctgttat----------c-gtttattt--cata--gac-----------------tc--ggttat
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                31867 53 +     46535 cc-------ttt--------tctccttttaatca-ac-ctgttat----------cagtttgttt--cata--gac-----------------tc--ggttat
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              14589 53 -     29447 cc-------ttt--------tctccttttaatca-ac-ctgttat----------cagtttgttt--cata--gac-----------------tc--ggttat
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Fukomys_damarensis.KN123630.1                          13891483 53 -  19261668 tc-------ttt--------cctcctgtcaatct-gc-ctgttgt----------cattttattt--catt--ggc-----------------tt--agttat
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     209724 54 -    847004 cc-------ttt--------tctccttctaatctaac-ctgttat----------cagtttggtt--cata--gat-----------------gc--tgttag
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           12103 54 -     43889 cc-------ttt--------tctccttctaatctaac-ctgttat----------cagtttggtt--cata--gat-----------------gc--tgttag
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           9172 54 +     27357 ca-------ttt--------tctccttttaatctaac-ctgttat----------cagtttagtt--caTA--GAC-----------------TC--TGTTAT
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               155061 53 +    324696 tc-------ttt--------acttctgttaatct-gt-ctgttgt----------tagtttattt--cata--gcc-----------------tc--agttat
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           11433 51 -     18683 cc-------ttt--------tctcctattaatct-gc-ctgctgt----------cagttgattt--cata--ggc-----------------t---agtta-
i Glis_glis.GliGli_scaffold_79770                       C 0 I 2
s Gorilla_beringei.k141_111300                               4107 53 -     14630 cc-------ttt--------tcttcttttgacat-gc-ctgttat----------ccatttattt--cata--gac-----------------tc--agttat
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119651206 53 - 195582420 cc-------ttt--------tcttcttttgacat-gc-ctgttat----------ccatttattt--cata--gac-----------------tc--agttat
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   76175 48 +    118900 tg-------ttt--------t---ctaataattt-gc-ctgttgt----------cagttgattt--catg--ggc-----------------t---agtta-
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 I 2
s Hapalemur_alaotrensis.k141_1280836                          637 54 +     10286 cc-------ttt--------tcttcttttaattg-ac-ctgttatt---------cagtttattt--caTA--GAC-----------------TC--GGTTAT
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_1254239                            8787 54 +      9690 cc-------ttt--------tcttcttttaattg-ac-ctgttatt---------cagtttattt--cata--gac-----------------tt--ggttat
i Hapalemur_gilberti.k141_1254239                       C 0 C 0
s Hapalemur_griseus.k141_1387522                             4416 54 +     56096 cc-------ttt--------tcttcttttaattg-ac-ctgttatt---------cagtttattt--cata--gac-----------------tc--ggttat
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        27692 54 -     42470 cc-------ttt--------tcttcttttaattg-ac-ctgttatt---------cagtttattt--caTA--GAC-----------------TC--GGTTAT
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        44290 54 -     54384 cc-------ttt--------tcttcttttaattg-ac-ctgttatt---------cagtttattt--cata--gac-----------------tc--ggttat
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2549868 52 +  31725842 tc-------ttt--------cctcttgtcaatct-gc-ctgtt-t----------aagtttattc--catt--gtc-----------------tc--agttat
i Heterocephalus_glaber.JH602058.1                      I 19 C 0
s Hoolock_leuconedys.ctg79                                      3507 53 -   7690867 cc-------ttt--------tcttcttttgacat-gc-ccgttat----------ccatttattt--cata--gac-----------------tc--agttat
i Hoolock_leuconedys.ctg79                                 I 50 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           17773 49 -    119109 -----------t--------cctcctgccaatct-ac-ctgttac----------tggtttattc--catt--ggc-----------------tc--tatttt
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       I 16 C 0
s Hylobates_abbotti.k141_866183                               775 53 -      1027 cc-------ttt--------tcttcttttgacat-gc-ctgttat----------ccatttattt--cata--gac-----------------tc--agttat
i Hylobates_abbotti.k141_866183                         C 0 n 0
s Hylobates_agilis.k141_624065                                797 53 +      2112 cc-------ttt--------tcttcttttgacat-gc-ccgttat----------ccttttattt--cata--gac-----------------tc--agttat
i Hylobates_agilis.k141_624065                          C 0 C 0
s Hylobates_klossii.k141_466549                             10373 53 +     11537 cc-------ttt--------tcttcttttgacat-gc-ccgttat----------ccatttattt--cata--gac-----------------tc--agttat
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14623478 53 -  25970782 cc-------ttt--------tcttcttttgacat-gc-ccgttat----------ccatttattt--cata--gac-----------------tc--agttat
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1002428                             739 53 +      1029 cc-------ttt--------tcttcttttgacat-gc-ctgttat----------ccatttattt--cata--gac-----------------tc--agttat
i Hylobates_muelleri.k141_1002428                       C 0 I 21
s Hystrix_cristata.HysCri_scaffold_50788                     4933 53 +     22540 ac-------ttt--------cctcctgtcaatct-gc-ctgttgt----------taggttgttt--cata--ggc-----------------tc--agtttt
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Indri_indri.k141_4418183                                    235 53 -      1457 TG-------TTT--------TCTCCTTTTAATCT-AC-CTGTTAT----------CAGTTTATTT--CATA--GAC-----------------TC--GGTTAT
i Indri_indri.k141_4418183                              C 0 C 0
s Jaculus_jaculus.JH725517.1                              8564499 34 +  11848649 --------------------------------------CTACTGT----------CAGTTTATTATATATA--GGT-----------------GC--ATTTGT
i Jaculus_jaculus.JH725517.1                            I 56 C 0
s Lagothrix_lagothricha.k141_12968                          48947 61 -    147782 TT-------TTGAAAGTAAATGTGCTTTTGATAT-GC-CTGTTAT----------CCATTTATTT--CATA--GAA-----------------TC--TGTTAT
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lemur_catta.scaffold_1                                258405972 53 - 285822530 cc-------ttt--------tctccttttaactg-ac-ctgttat----------cagtttattt--caca--gac-----------------tc--ggttat
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        22735 53 +     39228 cc-------ttt--------tctccttttaattg-ac-ctgttat----------cagtttattt--cata--gac-----------------tc--gggtac
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            52110 53 +     63517 cc-------ttt--------tctccttttaattg-ac-ctgttat----------cagtttattt--cata--gac-----------------tc--gggtac
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        77360 53 +    116806 cc-------ttt--------tctccttttaattg-ac-ctgttat----------cagtttattt--cata--gac-----------------tc--gggtac
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     30374 53 -     33031 cc-------ttt--------tctccttttaattg-ac-ctgttat----------cagtttattt--cata--gac-----------------tc--gggtac
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    11762 51 +     22452 ---------ttt--------tcccccattaacct-gc-ctgctgc----------caatttattt--cata--gac-----------------ac--agttat
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lophocebus_aterrimus.ctg55                             19247105 53 +  19376315 cc-------ttt--------tcttctttcgacag-gc-ctgttat----------ccgtttattt--cata--gac-----------------tc--agttat
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            9488 54 +     84689 cc-------ttt--------tctcctttcaatctaat-cagttat----------cagtttattt--cata--cac-----------------tc--agttat
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3777237 54 +   6799190 cc-------ttt--------tctcctttcaatctaat-cagttat----------cagtttattt--cata--cac-----------------tc--agttat
i Loris_tardigradus.ctg97                               C 0 C 0
s Macaca_arctoides.k141_2201161                             18780 53 +     74745 ac-------ttt--------tcttctttcgacgt-gc-ctgttat----------ccgtttattt--cata--gac-----------------tc--agttat
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12705301 53 +  12821369 ac-------ttt--------tcttctttcgacat-gc-ctgttat----------ccgtttattt--cata--gac-----------------tc--agttat
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                 946 53 -      3136 ac-------ttt--------tcttctttcgacat-gc-ctgttat----------ccgtttattt--cata--gac-----------------tc--agttat
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           45697 53 +     63263 ac-------ttt--------tcttctttcgacat-gc-ctgttat----------ccgtttattt--cata--gac-----------------tc--agttat
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                  463 53 -      2568 ac-------ttt--------tcttctttcgacat-gc-ctgttat----------ccgtttattt--cata--gac-----------------tc--agttat
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                  971 53 -      7381 ac-------ttt--------tcttctttcgacat-gc-ctgttat----------ccgtttattt--cata--gac-----------------tc--agttat
i Macaca_leonina.k141_467472                            C 0 I 62
s Macaca_maura.k141_251854                                  44208 53 -     79256 ac-------ttt--------tcttctttcgacat-gc-ctgttat----------ccgtttattt--cata--gac-----------------tc--agttat
i Macaca_maura.k141_251854                              C 0 I 62
s Macaca_mulatta.NC_041755.1                            196034378 53 + 196197964 AC-------TTT--------TCTTCTTTCGACAT-GC-CTGTTAT----------CCGTTTATTT--CATA--GAC-----------------TC--AGTTAT
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11444483 53 +  11645122 AC-------TTT--------tcttctttcgacat-gc-ctgctat----------ccgtttattt--cata--gac-----------------tc--aGTTAT
i Macaca_nemestrina.KQ004885.1                          C 0 I 62
s Macaca_nigra.k141_282495                                   3155 53 -     46448 ac-------ttt--------tcttctttcgacat-gc-ctgttat----------ccgtttattt--cata--gac-----------------tc--agttat
i Macaca_nigra.k141_282495                              C 0 I 62
s Macaca_radiata.k141_3680256                                 827 53 -     13212 ac-------ttt--------tcttctttcgacat-gc-ctgttat----------ccgtttattt--cata--gac-----------------tc--agttat
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 14569 53 -     55006 ac-------ttt--------tcttctttcgacat-gc-ctgttat----------ccgtttattt--cata--gac-----------------tc--agttat
i Macaca_siberu.k141_741907                             C 0 I 8
s Macaca_silenus.Contig12                                43839606 53 +  43892939 ac-------ttt--------tcttctttcgacat-gc-ctgttat----------ccgtttattt--cata--gac-----------------tc--agttat
i Macaca_silenus.Contig12                               C 0 I 62
s Macaca_thibetana.k99_662710                               15856 53 -     24607 ac-------ttt--------tcttctttcgacat-gc-ctgttat----------ccgtttattt--cata--gac-----------------tc--agttat
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               3160 53 -     27140 ac-------ttt--------tcttctttcgacat-gc-ctgttat----------ccgtttattt--cata--gac-----------------tc--agttat
i Macaca_tonkeana.k141_2870633                          C 0 I 62
s Mandrillus_leucophaeus.scaffold125                     43436264 53 -  43563597 cc-------ttt--------tcttcttttgacag-gc-ctgttac----------ccatttattt--cata--gac-----------------tc--agttat
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4449090 53 -   4543643 cc-------ttt--------tcttctttcgacag-gc-ctgttac----------ccatttattt--cata--gac-----------------tc--agttat
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               10552 31 +     15977 ---------------------------------------TCCTGT----------CAGCTTATCG--TGCA--GAC-----------------TG--GGTCAT
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1045487 31 -  26018355 ---------------------------------------TCCTGT----------CAGTTTTTCA--TATT--AGC-----------------TG--GGTCCT
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Microcebus_murinus.CM007691.1                          16508978 52 +  47401472 cc-------ttt--------tctccttttaattg-aC-CTGTTAT----------CAGTTTATTT--CATA--GAT-----------------TC--GCTT-T
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22818607 21 -  98408828 ---------------------------------------TTCTG--------------------A--CATC--AGC-----------------CG--GAGCCT
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miopithecus_ogouensis.k141_2935907                          817 53 +     29742 cc-------ttt--------tcttctttcgacgt-gc-ctgttat----------ccgtttattt--cata--gac-----------------tc--agttat
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirza_zaza.k141_226143                                     4377 53 +      8497 cc-------ttt--------tctccttttaatcg-ac-ctgttat----------cactttattt--cata--gat-----------------tc--gcttat
i Mirza_zaza.k141_226143                                C 0 C 0
s Mus_caroli.LT608236.1                                  70765088 31 +  92629107 ---------------------------------------TCTTGT----------TAGCTTATCA--TCCA--GGC-----------------TG--GGTCAT
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75488125 31 +  98207768 ---------------------------------------TCTTGT----------CAGCTTATTA--TCTA--GGC-----------------TG--GGTCAT
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67554366 31 +  89017189 ---------------------------------------TCTTGT----------CAGCTTATCA--TCTA--GGT-----------------TG--GGTCAT
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74329304 31 +  97876770 ---------------------------------------TCTTGT----------CAGCTTATTA--TCAA--GGC-----------------TG--GGTCAT
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              9880 70 +     98495 cc-------ttt--------tctcctatcaatct-gc-ctgaggt----------cagttgaatt--ctttttggtttttaatttgtgcattgt---agtca-
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 I 1
s Myocastor_coypus.MyoCoy_scaffold_3653                     88804 53 -    117718 tc-------ttt--------cctcctgttaatct-gc-ctatgct----------tggtttattc--tatt--ggc-----------------tt--agctat
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Nannospalax_galili.KL201303.1                            116932 55 +    362372 ca-------ttt--------tctcctgttaatag-cc-gtgctgt----------aaacttgtta--cata--gac-----------------ttccagtcat
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               7318 53 +     48152 cc-------ttt--------tcttctttcgctgt-gc-ctgttat----------ccatttattt--cata--gac-----------------tc--agttat
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Nomascus_annamensis.k141_1439838                           1675 53 +      3718 cc-------ttt--------tcttcttttgacat-gc-ccgttat----------ccatttattt--cata--gac-----------------tc--agttat
i Nomascus_annamensis.k141_1439838                      I 116 I 65
s Nomascus_concolor.k141_49591                               1908 53 +      2014 cc-------ttt--------tcttcttttgacat-gc-ccgttat----------ccatttattt--cata--gac-----------------tc--agttat
i Nomascus_concolor.k141_49591                          C 0 C 0
s Nomascus_gabriellae.k141_642452                             818 53 +      2851 cc-------ttt--------tcttcttttgacat-gc-ccgttat----------ccatttattt--cata--gac-----------------tc--agttat
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_a.k141_595747                                  1456 53 +      4512 cc-------ttt--------tcttcttttgacat-gc-ccgttat----------ccatttattt--cata--gac-----------------tc--agttat
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nycticebus_bengalensis.LG16                            65565929 54 -  95554990 CC-------TTG--------TCTCCTTTTAATCTAAT-CGGTTAT----------CAGTTTATTT--CATA--GAC-----------------TC--AGTTAT
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            2658 54 +      6470 cc-------ttg--------tctccttttaatctaat-cggttat----------cagtttattt--caTA--GAC-----------------TC--AGTTAT
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65668267 54 +  89412551 cc-------ttt--------tctccttttaatctaat-cggttat----------cagtttattt--cata--gac-----------------tc--agttat
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4994794 51 -  23139505 ---------ttc--------tttcccACTACCCT-AC-CTGTTGT----------CAATTCATTT--CATA--GGT-----------------GC--TATGAT
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3684343 53 +  10294119 TC-------TTT--------CCTCCCATCAGTCT-GC-CTGTTCT----------TGGCTTATTC--CAGT--GGC-----------------TT--AGATAT
i Octodon_degus.JH651621.1                              C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  123855 30 +    145789 ---------------------------------------TTCTGT----------CAGTTTATCA--CATC--AGC-----------------C---GAGCCT
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  35626 31 +     62360 ---------------------------------------TCCTGT----------CACCTTATCA--CATC--AGC-----------------TC--GGTCCT
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141874420 51 + 163896628 ---------ttt--------tcccccatgaatct-gc-ctgctgc----------caattgattt--cata--gac-----------------tc--agttat
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       37820 54 +     38679 cc-------ttt--------tctccttttaatctaac-cttttat----------cagtttagtt--cata--gac-----------------tc--tgttac
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18007248 54 -  38779656 cc-------ttt--------tctccttttaatctaAT-CTGTTAT----------CAGTTTAGTT--CATA--GAC-----------------TC--TGTTAC
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Pan_paniscus.CM003386.1                               127573460 53 - 205426864 cc-------ttt--------tcttcttttgacat-GC-CTGTTAT----------CCATTTATTT--CATA--GAC-----------------TC--AGTTAT
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120150613 53 - 196562556 cc-------ttt--------tcttcttttgacat-GC-CTGTTAT----------CCATTTATTT--CATA--GAC-----------------TC--AGTTAT
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Papio_anubis.CM001492.2                               188155055 53 - 188283584 cc-------ttt--------tcttctttcaacaG-GC-CTGTTAT----------CCGTTTATTT--CACA--GAC-----------------TC--AGTTAT
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             3372 53 +      5367 cc-------ttt--------tcttctttcgacag-gc-ctgttat----------ccgtttattt--caca--gac-----------------tc--agttat
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47512443 53 +  47705337 cc-------ttt--------tcttctttcgacag-gc-ctgttat----------ccgtttattt--caca--gac-----------------tc--agttat
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 66421 53 -    104429 cc-------ttt--------tcttctttcaacag-gc-ctgttat----------ccgtttattt--caca--gac-----------------tc--agttat
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    4953 53 +     14967 cc-------ttt--------tcttctttcgacag-gc-ctgttat----------ccgtttattt--caca--gac-----------------tc--agttat
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                  814 53 -      7628 cc-------ttt--------tcttctttcgacag-gc-ctgttat----------ccgtttattt--caca--gac-----------------tc--agttat
i Papio_ursinus.k141_1345919                            C 0 C 0
s Perodicticus_ibeanus.k141_117958                           3862 54 -     23713 gc-------ttt--------tctccttttaatcgaat-cttgtat----------cagtttattt--cata--gac-----------------tc--agttat
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            23160 54 -     27972 gc-------ttt--------tctccttttaatcgaat-cttgtat----------cagtttattt--cata--gac-----------------tc--agttat
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      42410 51 -     45160 CC-------ATG--------TGCACTGGTAATCT-GC-CTGTGGA----------GAGGATATAG--TATA--GGC-----------------TC--TG--AG
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 I 2
s Peromyscus_maniculatus.KI615518.1                       4948812 31 -   8017169 ---------------------------------------TCCTGT----------CACCTCATCA--CATC--AGC-----------------TC--GGTCCT
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    11022 53 -     36578 tc-------ttc--------ccttctatccaact-gc-ctgttgt----------cagtgtcctc--catc--agc-----------------tc--agcttt
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Piliocolobus_badius.k141_1987485                            840 53 -      5908 cc-------ttt--------tcttctttcgacgt-gc-ctgttat----------ccatttattt--cata--gac-----------------tc--agttat
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       1460 53 -     17985 ct-------ttt--------tcttctttcgacgt-gc-ctgttat----------ccatttattt--cata--gac-----------------tc--agttat
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                             827 53 +      7694 ct-------ttt--------tcttctttcgacgt-gc-ctgttat----------ccatttattt--cata--gac-----------------tc--agttat
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26739305 53 +  26888534 CC-------TTT--------TCTTCTTTCGACGT-GC-CTGTTAT----------CCATTTATTT--CATA--GAC-----------------TC--AGTTAT
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pithecia_albicans.k141_991845                             42439 51 -     61926 cc-------ttt--------ccttcttttgatat-gc-ctgttat----------ccatttattt--cat----ag-----------------tc--agtcat
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        23868 53 +     78826 cc-------ttt--------ccttcttttgatat-gc-ctgttat----------ccatttattt--cata--gag-----------------tc--agtcat
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              7819 51 -     15800 cc-------ttt--------ccttcttttgatat-gc-ctgttat----------ccatttattt--cat----ag-----------------tc--agtcat
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        11017 51 -     16101 cc-------ttt--------ccttcttttgatat-gc-ctgttat----------ccatttattt--cat----ag-----------------tc--agtcat
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          4326 51 +      9673 cc-------ttt--------ccttcttttgatat-gc-ctgttat----------ccatttattt--cat----ag-----------------tc--agtcat
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13473320 53 -  19735023 cc-------ttt--------ccttcttttgatat-gc-ctgttat----------ccatttattt--cata--gag-----------------tc--agtcat
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           12228 51 -     31692 cc-------ttt--------ccttcttttgatat-gc-ctgttat----------ccatttattt--cat----ag-----------------cc--agtcat
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       21662 53 +     44506 cc-------ttt--------cattcttttgatat-gc-ctgttat----------ccatttattt--cata--gag-----------------tc--agtcat
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        21874 53 +     67491 cc-------ttt--------cattcttttgatat-gc-ctgttat----------ccatttattt--cata--gag-----------------tc--agtcat
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      12113 53 -     98129 cc-------ttt--------cattcttttgatat-gc-ctgttat----------ccatttattt--cata--gag-----------------tc--agtcat
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     21713 53 +    147771 cc-------ttt--------cattcttttgatat-gc-ctgttat----------ccatttattt--cata--gag-----------------tc--agtcat
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        21968 53 -     23762 cc-------ttt--------cattcttttgatat-gc-ctgttat----------ccatttattt--cata--gag-----------------tc--agtcat
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          2434 53 -     55515 cc-------ttt--------cattcttttgatat-gc-ctgttat----------ccatttattt--cata--gag-----------------tc--agtcat
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         21787 53 +    152463 cc-------ttt--------cattcttttgatat-gc-ctgttat----------ccatttattt--cata--gag-----------------tc--agtcat
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      8547 53 +      8943 cc-------tct--------cattcttttgatat-gc-ctgttat----------ccatttattt--cata--gag-----------------tc--agtcat
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                         11509 53 +    134592 cc-------ttt--------cattcttttgatat-gc-ctgttat----------ccatttattt--cata--gag-----------------tc--agtcat
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          22097 53 -     75465 cc-------ttt--------cattcttttgatat-gc-ctgttat----------ccatttattt--cata--gag-----------------tc--agtcat
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              185992 53 -    373494 cc-------ttt--------tcttcttttgacat-TC-CTGTTAT----------CCATTTATTT--CATA--GAC-----------------TC--AGTTAT
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19806640 53 +  19899266 cc-------ttt--------tcttcttttgacat-tc-ctgttat----------ccatttattt--cata--gac-----------------tc--agttat
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               4562 53 -     15069 cc-------ttt--------tcgtctttcgatgt-gc-ctgttat----------ccatttattt--cata--gac-----------------tc--agttat
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              4696 53 +     14865 cc-------ttt--------tcgtctttcgatgt-gc-ctggtat----------ccatttattt--cata--gac-----------------tc--agttat
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6847353 53 +  12164890 cc-------ttt--------tctccttttaattg-aC-CTGTtat----------cagtttattt--cata--gac-----------------tc--ggttat
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    666575 53 -   2312742 CT-------TTC--------CCTCCTTTTAATCT-AC-ctgctat----------cagtttattt--cata--gac-----------------tc--agttat
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         2402 53 +     11805 ct-------ttc--------cctcctttaaatct-ac-ctgctat----------cagtttattt--cata--gac-----------------tc--agttac
i Propithecus_coronatus.k141_1353159                    I 22 C 0
s Propithecus_diadema.k141_577245                           41738 53 +     52369 ct-------ttc--------cctctttttaatct-ac-ctgctat----------cagttcattt--cata--gac-----------------tc--agttat
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         34128 53 -     44753 ct-------ttc--------cctctttttaatct-ac-ctgctat----------cagttcattt--cata--gac-----------------tc--agttat
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            16048 53 +     27322 ct-------ttc--------cctccttttaatct-ac-ctgctat----------cagtttattt--cata--gac-----------------tc--agttat
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       15684 53 -     53241 cc-------ttt--------tctccatttaatct-ac-ctgttat----------cagtttattt--cata--gac-----------------tc--cgttat
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         37956 53 -     48185 ct-------ttc--------cctccttttaatct-ac-ctgctat----------cagtttattt--cata--gac-----------------tc--agttat
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           32102 31 +     77221 ---------------------------------------TCCTGT----------CAGCTTATCG--TGCA--GAC-----------------TG--GGTCAT
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pygathrix_cinerea.k141_374971                             28680 53 +     56732 cc-------ttt--------tcttctttcgatgt-gc-ctgttat----------ccatttattt--cata--gac-----------------tc--agttat
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6805171 53 +   6970761 cc-------ttt--------tcttctttcgatgt-gc-ctgttat----------ccatttattt--cgta--gac-----------------tc--agttat
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             4565 53 +     18040 cc-------ttt--------tcttctttcgatgt-gc-ctgttat----------ccatttattt--cgta--gac-----------------tc--agttat
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rattus_norvegicus.chr11                                13914131 31 +  90463843 ---------------------------------------TCGTGT----------CAGCTTATCA--TCCA--GGC-----------------TG--GGTCAT
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinopithecus_bieti.k119_1391695                            793 53 -      1866 cc-------ttt--------tcttctttcgatgt-gc-ctgttat----------ccatttattt--cata--gac-----------------tc--agttat
i Rhinopithecus_bieti.k119_1391695                      C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206376450 53 - 206558726 Cc-------ttt--------tcttctttcgatgt-gc-ctgttat----------ccatttattt--cata--gac-----------------tc--agttat
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44855350 53 -  45163003 cc-------ttt--------tcttctttcgatgt-gc-ctgttat----------ccatttattt--cata--gac-----------------tc--agttat
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15671527 51 -  43202129 CC-------TTT--------CATTCTTTTGATAT-GC-CTGTTAT----------CCATTTATTT--CATA--G-------------------TC--AGTTAT
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        3444 51 +     34089 cc-------ttt--------cattcttttgatat-gc-ctgttat----------ccatttattt--cata--g-------------------tc--agttat
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              3385 51 -     60842 cc-------ttt--------cattcttttgatat-gc-ctgttat----------ccatttattt--cata--g-------------------tc--agttat
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              3480 51 +     67014 cc-------ttt--------cattcttttgatat-gc-ctgttat----------ccatttattt--cata--g-------------------tc--agttat
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              3458 51 +     60816 cc-------ttt--------cattcttttgatat-gc-ctgttat----------ccatttattt--cata--g-------------------tc--agttat
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 3395 51 -     76454 cc-------ttt--------cattcttttgatat-gc-ctgttat----------ccatttattt--cata--g-------------------tc--agttat
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17340118 53 -  30362882 cc-------ttt--------cattcttttgatat-gc-ctgttat----------ccatttattt--cata--gag-----------------tc--agttat
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         19477 53 -     62485 cc-------ttt--------cattcttttgatat-gc-ctgttat----------ccatttattt--cata--gag-----------------tc--agttat
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Semnopithecus_entellus.k141_1572367                        2177 53 +     15331 cc-------ttt--------tcttctttcgatgt-gc-ctgttat----------ccatttattt--cata--gac-----------------tc--agttat
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       7574 53 +     20762 cc-------tat--------tcttctttcgatgt-gc-ctgttat----------ccatttattt--cata--gac-----------------tc--agttat
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         117572 53 +    130994 cc-------ttt--------tcttctttcgatgt-gc-ctgttat----------ccatttattt--cata--gac-----------------tc--agttat
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           36363 53 +     46263 cc-------ttt--------tcttctttcgatgt-gc-ctgttat----------ccatttattt--cata--gac-----------------tc--agttat
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     29477 53 +     42640 cc-------ttt--------tcttctttcgatgt-gc-ctgttat----------ccatttattt--cata--gac-----------------tc--agttat
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        12521 53 +     30600 cc-------ttt--------tcttctttcgatgt-gc-ctgttat----------ccatttattt--cata--gac-----------------tc--agttat
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   98396 31 -    120886 ---------------------------------------TTCGGT----------CAGATTATCA--CGTC--AAC-----------------TG--GATGCT
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        13735 53 -  13920577 cc-------ttt--------tcttcttttgacat-gc-ccgttat----------ccatttattt--cata--cac-----------------tc--agttat
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tarsius_lariang.k141_609102                               25264 53 +     42269 ct-------ttt--------tctgcttttaatct-gc-ctgataa----------cagtttattt--cata--gac-----------------tc--agttac
i Tarsius_lariang.k141_609102                           I 22 C 0
s Tarsius_wallacei.k141_48636                               58580 53 +     65473 ct-------ttt--------tctgcttttaatct-gc-ctgataa----------cagtttattc--cata--gac-----------------tc--agttac
i Tarsius_wallacei.k141_48636                           I 22 C 0
s Theropithecus_gelada.CM009951.1                       194006582 53 - 194193292 CC-------TTT--------TCTTCTTTCGACAG-GC-CTGTTAT----------CCGTTTATTT--CACA--GAC-----------------TC--AGTTAT
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             38088 53 -     47444 tc-------ttc--------cctcctgtcaatct-gc-ctgttat----------cagcttcctc--cagt--aac-----------------tc--agcttt
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Trachypithecus_auratus.k141_738098                        25684 53 +     38948 cc-------ttt--------tcttcttttgatgt-ac-ctgttat----------ccatttattt--cata--gac-----------------tc--agttat
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   19411 53 -     32910 cc-------ttt--------tcttctttcgatgt-ac-ctgttat----------ccatttattt--cata--gac-----------------tc--agttat
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                       798 53 -     12939 cc-------ttt--------tcttctttcgatgt-ac-ctgttat----------ccatttattt--cata--gac-----------------tc--agttat
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                        733 53 -     14244 cc-------ttt--------tcttctttcgatgt-ac-ctgttat----------ccatttattt--cata--gac-----------------tc--agttat
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           42131 53 -     54611 cc-------ttt--------tcttctttcgatgt-ac-ctgttat----------ccatttattt--cata--gac-----------------tc--agttat
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_878600                         961 53 +      1165 cc-------ttt--------tcttctttcgatgt-ac-ctgttat----------ccatttattt--cata--gac-----------------tc--agttat
i Trachypithecus_germaini.k141_878600                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     2109 53 -     15592 cc-------ttt--------tcttctttcgatgt-ac-ctgttat----------ccatttattt--cata--gac-----------------tc--agttat
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                           766 53 +     14371 cc-------ttt--------tcttctttcgatgt-ac-ctgttat----------ccatttattt--cata--gac-----------------tc--agttat
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  50518 53 +     51589 cc-------ttt--------tcttctttcgatgt-ac-ctgttat----------ccatttattt--cata--gac-----------------tc--agttat
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       13699 53 +     14732 cc-------ttt--------tcttctttcgatgt-gc-ctgttat----------ccatttattt--cata--gac-----------------tc--agttat
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       4171 53 -     28054 cc-------ttt--------tcttctttcgatgt-ac-ctgttat----------ccatttattt--cata--gac-----------------tc--agttat
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44658971 53 -  44834318 cc-------ttt--------tcttctttcgatgt-ac-ctgttat----------ccatttattt--cata--gac-----------------tc--agttat
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       1274 53 +     13828 cc-------ttt--------tcttctttcgatgt-ac-ctgttat----------ccatttattt--cata--gac-----------------tc--agttat
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tupaia_chinensis.KB320831.1                             2791591 51 -   3938065 ct-------tat--------tctcctgctaatct-gt-ctgttat----------cattttgttt--ca----gac-----------------tc--agttat
i Tupaia_chinensis.KB320831.1                           I 14 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    3859 51 +     13056 ct-------tat--------tctcctgctaatct-gt-ctgttat----------cattttgttt--ca----ggc-----------------tc--agttac
i Tupaia_tana.TupTan_flattened_line_68454               I 14 C 0
s Varecia_rubra.k141_432109                                  4060 53 -     20643 ca-------ttt--------tctccttttaatcg-ac-ctgttat----------cagtttattt--cata--gac-----------------tc--ggttat
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             23601 53 -     33872 ca-------ttt--------tctccttttaatcg-ac-ctgttat----------cagtttattt--cata--gac-----------------tc--ggttat
i Varecia_variegata.k141_775891                         C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     14029 34 -     20485 --------------------------------------ctgctat----------cagtttattacatata--tgt-----------------at--attcat
i Zapus_hudsonius.ZapHud_scaffold_64392                 I 8 C 0
e Eptesicus_fuscus.JH977687.1                             4702143 415 +   6522550 I
e Macroglossus_sobrinus.MacSob_scaffold_879                699974 431 +    802869 I
e Sorex_araneus.JH798170.1                               17748590 843 -  27805282 I
e Dinomys_branickii.DinBra_scaffold_1996                   156356 54 +    228994 I
e Erinaceus_europaeus.JH835290.1                         11530833 462 +  16010500 I
e Chaetophractus_vellerosus.ChaVel_scaffold_1070855          1230  0 -      1715 I
e Aplodontia_rufa.AprRuf_scaffold_156013                     2579  2 +      5067 I
e Suricata_suricatta.SurSur_flattened_line_20339            25319 430 +     62062 I
e Ziphius_cavirostris.ZipCav_flattened_line_127025           5301 442 -      8775 I
e Zalophus_californianus.ZalCal_flattened_line_4097        212018 448 -    227762 I
e Vulpes_lagopus.VulLag_flattened_line_2045                135489 449 -    281493 I
e Vicugna_pacos.KN269600.1                                1523037 433 -   2331223 I
e Ursus_maritimus.KK498671.1                              6512543 460 +  28682327 I
e Uropsilus_gracilis.UroGra_scaffold_4143_0                 24925  0 -     25548 I
e Tursiops_truncatus.MRVK01000923.1                      69311805 441 -  96451834 I
e Trichechus_manatus.JH594618.1                          16079679 1700 +  31416278 I
e Tragulus_javanicus.TraJav_scaffold_14717                   3584 419 +     90398 I
e Tonatia_saurophila.TonSau_scaffold_3334                  134241 421 -    259118 I
e Tolypeutes_matacus.TolMat_scaffold_269431                  1990 2406 +      6782 I
e Tapirus_terrestris.TapTer_scaffold_14939                  55756 434 +     99546 I
e Tapirus_indicus.TapInd_scaffold_176                      805095 435 +   1148477 I
e Tamandua_tetradactyla.TamTet_scaffold_26877               13106 433 +     45698 I
e Tadarida_brasiliensis.TadBra_scaffold_145589               4174 407 -      6213 I
e Sus_scrofa.CM000824.4                                 189270228 447 + 218635234 I
e Spilogale_gracilis.SpiGra_flattened_line_905             232751 445 -    276980 I
e Solenodon_paradoxus.SolPar_flattened_line_1012            16376 416 +    739146 I
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   29737 434 -    114521 I
e Saiga_tatarica.SaiTat_scaffold_82192                       5983 428 +     12214 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                17647 435 +    109198 I
e Rhinolophus_sinicus.LVEH01000179.1                      1786172 430 +   2252614 I
e Rangifer_tarandus.RanTarSib_scaffold_24239                14178 431 +     68503 I
e Puma_concolor.QAVW01000427.1                          131532079 431 - 161321710 I
e Pteropus_vampyrus.KN525959.1                             602305 437 -   3946241 I
e Pteropus_alecto.KB031157.1                             13244354 438 -  17261082 I
e Pteronura_brasiliensis.PteBra_flattened_line_1343        243991 454 -    344369 I
e Pteronotus_parnellii.KE867983.1                            2230 422 -     27784 I
e Procavia_capensis.ProCapCap_scaffold_15315                74302 1939 +     78963 I
e Platanista_gangetica.PlaMin_flattened_line_72990           3771 443 +     21690 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            95224 410 +    112873 I
e Phocoena_phocoena.PhoPho_flattened_line_11948            119703 443 -    122454 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113416 447 -    135482 I
e Pantholops_hodgsonii.KE114631.1                         1064538 417 -   1292953 I
e Panthera_tigris.KE721879.1                              5025497 431 -   6340057 I
e Panthera_pardus.KV860323.1                              3635849 432 +  18214204 I
e Panthera_onca.PanOnc_flattened_line_1615                  32116 431 +    295523 I
e Ovis_canadensis.OviCan_scaffold_6251                      76891 417 +    140051 I
e Ovis_aries.CM001582.2                                 134075677 417 - 275406953 I
e Otocyon_megalotis.JAEUCK010005121.1                      305421 444 -    505867 I
e Orycteropus_afer.OryAfe_flattened_line_13509              41471 1764 -     66828 I
e Orcinus_orca.KB316965.1                                 7223086 443 -   7562323 I
e Okapia_johnstoni.LVCL01S0017931.1                         35255 573 +     78940 I
e Odocoileus_virginianus.KZ101650.1                       1078100 432 +   1425656 I
e Odobenus_rosmarus.KB229369.1                             677288 443 -   3126709 I
e Nyctereutes_procyonoides.CAJHUB010000786.1                28082 449 +   3668941 I
e Noctilio_leporinus.NocLep_scaffold_12062                  47676 415 +     94413 I
e Neophocaena_asiaeorientalis.KZ688543.1                  3949402 443 -   4490290 I
e Neomonachus_schauinslandi.NINY01007774.1                4482632 454 -  14209539 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3432 432 -      8794 I
e Myotis_myotis.MyoMyo_scaffold_6123                         8554 416 +     66751 I
e Myotis_lucifugus.GL429887.1                             3463359 417 -   3747815 I
e Myotis_davidii.KB114863.1                               5017463 416 +   6462685 I
e Myotis_brandtii.KE161952.1                               965772 418 +   8389877 I
e Mustela_putorius.JH417978.1                             4421898 453 -  28371801 I
e Murina_feae.MurFea_scaffold_2254                          17451 414 -    100666 I
e Mungos_mungo.MunMun_flattened_line_8729                  142653 430 -    168139 I
e Moschus_moschiferus.MosMos_scaffold_146101                 2972 432 -      4346 I
e Mormoops_blainvillei.MorMeg_scaffold_2952                159560 424 +    265003 I
e Monodon_monoceros.MonMon_M_scaffold_5598                 144790 442 +    154973 I
e Mirounga_angustirostris.MirAng_flattened_line_8852         9033 661 -    104932 I
e Miniopterus_schreibersii.MinSch_scaffold_24116            32480 421 +     45743 I
e Miniopterus_natalensis.LDJU01000022.1                   8207809 420 +  10048721 I
e Micronycteris_hirsuta.MicHir_scaffold_37978               21050 428 -     32043 I
e Microgale_talazaci.MicTal_scaffold_34660                  29351 1133 -     48017 I
e Mellivora_capensis.MelCap_flattened_line_146202             327 452 -      1999 I
e Megaderma_lyra.MegLyr_scaffold_3562                       62628 576 -    234502 I
e Manis_pentadactyla.KN017078.1                             34538 441 +     58827 I
e Manis_javanica.JSZB01003966.1                            144466 438 +    252755 I
e Lycaon_pictus.CM007556.1                               11085089 449 +  39895028 I
e Loxodonta_africana.GL010040.1                          20589215 1702 -  62548349 I
e Lipotes_vexillifer.KE558548.1                            134353 444 +   3060487 I
e Leptonychotes_weddellii.KB714749.1                      3083728 458 -   3498232 I
e Lasiurus_borealis.LasBor_scaffold_5102                   111937 417 -    115756 I
e Kogia_breviceps.KogBre_flattened_line_35920               22021 443 +     37189 I
e Inia_geoffrensis.IniGeo_flattened_line_66725               7195 437 +     17520 I
e Hyaena_hyaena.HyaHya_flattened_line_20729                 14013 474 -     67322 I
e Hipposideros_galeritus.HipGal_scaffold_104691              5946 409 -      9143 I
e Hipposideros_armiger.JXIK01001085.1                      276788 408 -    477199 I
e Hippopotamus_amphibius.HipAmp_scaffold_1308              145449 430 +    277961 I
e Heterohyrax_brucei.HetBruBak_scaffold_25354               54438 1939 +     73687 I
e Hemitragus_hylocrius.HemHyl_scaffold_16669                25884 416 -     91191 I
e Helogale_parvula.HelPar_flattened_line_22962              14960 432 +     53719 I
e Giraffa_tippelskirchi.LVKQ01S012154.1                    179385 717 -    189561 I
e Felis_nigripes.FelNig_flattened_line_8080                 18925 427 +     52776 I
e Felis_catus_fca126.CM031420.1                         129277790 427 - 158578461 I
e Eubalaena_japonica.EubJap_flattened_line_7756             59838 466 +     89355 I
e Eschrichtius_robustus.EscRob_flattened_line_685          313408 442 +    330699 I
e Equus_przewalskii.ATBW01073585.1                          11036 704 +     92910 I
e Equus_caballus.CM000402.2                              13349546 704 +  41866177 I
e Equus_asinus.JREZ01000062.1                             5851044 703 -   7175178 I
e Enhydra_lutris.KZ291749.1                              85869516 453 +  99434291 I
e Elephantulus_edwardii.JH947210.1                        7804622 10712 +  15467074 I
e Elaphurus_davidianus.JRFZ01086400.1                     1489870 432 +   1727528 I
e Eidolon_helvum.KE772537.1                                 10556 435 +     24177 I
e Echinops_telfairi.JH980316.1                           22994071  0 -  44670279 C
e Diceros_bicornis.DicBicMic_scaffold_9545                    953 1024 +    151128 I
e Dicerorhinus_sumatrensis.PEKH010003161.1                 320309 1016 +    993696 I
e Desmodus_rotundus.KZ672188.1                           18697183 419 -  18957592 I
e Delphinapterus_leucas.KZ290064.1                       80035206 438 -  96802777 I
e Dasypus_novemcinctus.JH568778.1                          180040 2424 -   6883506 I
e Cryptoprocta_ferox.CryFer_flattened_line_19014            49751 433 -     70449 I
e Crocidura_indochinensis.CroInd_scaffold_38409             18067 408 -     19186 I
e Craseonycteris_thonglongyai.CraTho_scaffold_22679         37588 826 -     40477 I
e Condylura_cristata.JH655880.1                          60611131 297 +  78930452 I
e Choloepus_hoffmanni.KN194586.1                           760141 439 +    964067 I
e Choloepus_didactylus.ChoDid_scaffold_36182                14830 439 -     21363 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_160623         1406 1024 -      9338 I
e Catagonus_wagneri.CatWag_scaffold_1305                   157166 412 -    276539 I
e Carollia_perspicillata.CarPer_scaffold_4436               57873 420 +     67245 I
e Capra_hircus.CM004562.1                               135704839 417 - 157403528 I
e Capra_aegagrus.CM003214.1                              21323612 417 + 157394656 I
e Canis_lupus_orion.HG994411.1                           16452657 449 -  44759192 I
e Canis_lupus_familiaris.chr31                           11085633 449 +  39895921 I
e Canis_lupus_dingo.QKWQ01001993.1                       11263104 449 -  35597290 I
e Canis_lupus_VD.CanFam_VD_scaffold_16982                   11461 449 +     87036 I
e CanFam4.chr31                                          11516443 449 +  39901454 I
e Camelus_ferus.KB016973.1                                2971365 436 +   6889770 I
e Camelus_dromedarius.KN271192.1                           395631 437 -  15254737 I
e Camelus_bactrianus.KN276303.1                           3217927 436 -   8989139 I
e Bubalus_bubalis.KI419065.1                              1229342 431 -   1914593 I
e Bos_taurus.CM000177.6                                 136293586 432 - 158972876 I
e Bos_mutus.JH883513.1                                     570227 432 -    998990 I
e Bos_indicus.CM003021.1                                138137853 432 - 161108492 I
e Bison_bison.KN264915.1                                  6557614 432 +   6870073 I
e Beatragus_hunteri.BeaHun_scaffold_21644                   41603 412 -     72089 I
e Balaenoptera_bonaerensis.DF502048.1                        3753 444 -     13118 I
e Balaenoptera_acutorostrata.KI537095.1                  26378522 443 +  51448160 I
e Artibeus_jamaicensis.ArtJam_scaffold_41619                 7075 421 -     29036 I
e Antilocapra_americana.AntAmePen_scaffold_42841            29107 427 +     33004 I
e Anoura_caudifer.AnoCau_scaffold_422                      388679 416 -    631301 I
e Ammotragus_lervia.NIVO01013474.1                        3518508 445 +   4113121 I
e Ailurus_fulgens.LNAC01000003.1                          7091784 657 -  16596857 I
e Ailuropoda_melanoleuca.LNAT01000321.1                  10655057 459 +  23371972 I
e Acinonyx_jubatus.LLWD01000356.1                         2031739 430 +   3721120 I
e Hylobates_pileatus_a.tarseq_592                             33311  5 -     60944 I
e Xerus_inauris.XerIna_scaffold_7898                       125752  2 -    134049 I
e Spermophilus_dauricus.KZ294190.1                        2238652  2 +   2842873 I
e Marmota_marmota.CZRN01000005.1                         36872571  2 +  64221397 I
e Ictidomys_tridecemlineatus.JH393315.1                   7124732  2 +  13083262 I
e Ellobius_lutescens.LOEQ01003611.1                        238324 20 -    369425 I
e Nomascus_siki_b.tarseq_80                             24175  0 -  18771707 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               10775 13 +    209709 cat-------a-------------------cctt---cagag
s Acomys_cahirinus.AcoCah_scaffold_1625                    111128 13 -    189883 GGA-------G-------------------CCCT---CAGAG
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   11802 13 -     22067 AAA-------A-------------------CCAG---CAGCA
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_3103728                   1377 13 +      1665 cat-------a-------------------cttt---cagag
i Allenopithecus_nigroviridis.k141_3103728              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                          853 13 -     29318 cat-------a-------------------cttt---cagag
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_21674                           1070 13 -      1421 cat-------a-------------------cttt---cagag
i Allochrocebus_preussi.k141_21674                      I 108 C 0
s Allochrocebus_solatus.k141_371672                           747 13 -     80423 cat-------a-------------------cttt---cagag
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             9039 13 -     18050 cat-------a-------------------ccct---cagag
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_discolor.k141_811576                              9716 13 -     21359 cat-------a-------------------ccct---cagag
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_298055                                 1012 13 +      1823 CAT-------A-------------------CCCT---CAGAG
i Alouatta_juara.k141_298055                            I 61 I 8
s Alouatta_macconnelli.k141_1331706                          9012 13 -     10438 cat-------a-------------------ccct---cagag
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            5668 13 +      7047 cat-------a-------------------ccct---cagag
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             8948 13 +     10410 cat-------a-------------------ccct---cagag
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            2758 13 -      4927 cat-------a-------------------ccct---cagag
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             5687 13 +      6429 cat-------a-------------------ccct---cagag
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Aotus_azarae.k141_3170768                                 61396 13 +     78111 cat-------a-------------------ccct---cagag
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            4337 13 +     22701 cat-------a-------------------ccct---cagag
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5748294 13 +   9889416 CAT-------A-------------------CCCT---CAGAG
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             4879 13 -    104377 cat-------a-------------------ccct---cagag
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               4885 13 +     23246 cat-------a-------------------ccct---cagag
i Aotus_vociferans.k141_718647                          C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      16689 12 +     17483 AGA-------A-------------------CCCT----AGAG
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9538144 13 +  39197703 cat-------a-------------------ccct---cagag
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             59415 13 +     85812 CAT-------A-------------------CCCT---CAGAG
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                10427 13 +     89302 cat-------a-------------------ccct---cagag
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             14932 13 -     58268 cat-------a-------------------ccct---cagag
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             62923 13 +    119057 cat-------a-------------------ccct---cagag
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               4892 13 -     25888 cat-------a-------------------ccct---cagag
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 5526 13 -     16375 aga-------a-------------------ccct---cagaa
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              1846 13 +      2719 aga-------a-------------------ccct---cagaa
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Cacajao_ayresi.k141_724503                               112785 13 -    171031 cat-------a-------------------ccct---cagag
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 11813 13 +    125063 cat-------a-------------------ccct---cagag
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                13858 13 -    216513 cat-------a-------------------ccct---cagag
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        6398 13 -    134917 cat-------a-------------------ccct---cagag
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Capromys_pilorides.CapPil_scaffold_979108                   792 13 -      1248 caa-------a-------------------ccct---tggag
i Capromys_pilorides.CapPil_scaffold_979108             C 0 C 0
s Carlito_syrichta.NW_007248099.1                          307833 13 +    345090 CAA-------T-------------------CCCT---TGGAT
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   29498 13 +     33760 caa-------a-------------------ccct---caggg
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15785441 13 -  24422027 NNN-------N-------------------NNNN---NNNNN
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15797375 13 -  24440124 caa-------a-------------------ccct---gggag
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       175566 13 +    436027 caa-------a-------------------ccct---gggag
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18889628 13 -  29618158 cat-------a-------------------ccct---cagag
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 7172 13 -     26817 cat-------a-------------------ccct---cagag
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                11412 13 +     25043 cat-------a-------------------ccct---cagag
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         6866 13 +     21754 caa-------t-------------------ccct---caggt
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6554069 13 +   6739814 cat-------a-------------------cttt---cagag
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      25546 13 +     60454 cat-------a-------------------cttt---cagag
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                           751 13 -     21101 cat-------a-------------------cttt---cagag
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         58061 13 -    107033 cat-------a-------------------cttt---cagag
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                         953 13 -     17608 cat-------a-------------------cttt---cagag
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          28451 13 +     30494 cat-------a-------------------cttt---cagag
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          57294 13 -     59240 cat-------a-------------------cttt---cagag
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                           995 13 +     16677 cat-------a-------------------cttt---cagag
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           23153 13 +     35983 cat-------a-------------------cttt---cagag
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11989684 13 +  12117833 cat-------a-------------------cttt---cagag
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46476439 13 +  46592721 cat-------a-------------------cttt---cagag
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      39990 13 -     45581 cat-------a-------------------cttt---cagag
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                        999 13 +     35577 cat-------a-------------------cttt---cagag
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                         772 13 -     25661 cat-------a-------------------cttt---cagag
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                         750 13 -     17744 cat-------a-------------------cttt---cagag
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        20359 13 +     37128 cat-------a-------------------cttt---cagag
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           57820 13 -     68416 aga-------a-------------------ccct---cagaa
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            6863 13 +     13308 aga-------a-------------------ccct---cagaa
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             4428 13 -     18223 cat-------a-------------------ccct---aagag
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             21451 13 +     25473 cat-------a-------------------ccct---aagag
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           40486 13 +     57117 cat-------a-------------------ccct---aagag
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          45165 13 +     54541 cat-------a-------------------ccct---aagag
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15960586 13 +  43084221 caa-------a-------------------ccct---tggag
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         69987 13 +    196370 cat-------a-------------------ccct---cagag
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          14167 13 +     40510 cat-------a-------------------ccct---cagag
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15137913 13 -  15256731 cat-------a-------------------cttt---cagag
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      32960 13 -     53260 cat-------a-------------------cttt---cagag
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101143523 13 + 101219884 CAT-------A-------------------CTTT---CAGAG
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10885288 13 +  10971483 CAT-------A-------------------CCTT---CAGAG
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147663452 13 + 156195979 cat-------a-------------------cctt---cagag
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            15436 13 +     23629 cat-------a-------------------cctt---cagag
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 277094 13 -    399297 GGA-------A-------------------CCCT---AAGAA
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53027780 13 +  72327488 GGG-------A-------------------CCCT---CAAAA
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  206997 16 -    956709 caa-------a-------------------ccctcctccgag
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 29554 13 -     67205 caa-------a-------------------ccct---tagag
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                16594 13 +     26546 caa-------a-------------------ccct---gggag
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             57686 13 -    236241 caa-------a-------------------ccct---tggag
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16843673 13 +  31942871 aga-------a-------------------ccca---cagaa
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Dipodomys_ordii.KN672545.1                              3655018  6 +   4240102 ---------------------------------A---CAGGG
i Dipodomys_ordii.KN672545.1                            I 2 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 26654  6 +     28912 ---------------------------------A---CAGGG
i Dipodomys_stephensi.DipSte_scaffold_44365             I 2 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                34932 13 -     73477 caa-------a-------------------ccct---gggag
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        238344  7 -    369425 --------------------------------CT---CAAAA
i Ellobius_lutescens.LOEQ01003611.1                     I 20 C 0
s Ellobius_talpinus.LOJH01090055.1                           5448 13 -      7838 gga-------a-------------------ccct---caaga
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Erythrocebus_patas.Contig8                             48770093 13 -  48907691 cat-------a-------------------cttt---cagag
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eulemur_albifrons.k141_715837                              3864 13 +     13586 aga-------a-------------------ccct---cagaa
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               3801 13 -      6809 aga-------a-------------------ccct---cagaa
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            10277 13 +     36558 tga-------a-------------------cctt---cagaa
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             6593 13 +     60246 aga-------a-------------------ccct---cagaa
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                10072 13 +    109717 aga-------a-------------------ccct---cagaa
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               14455 13 +     16540 aga-------a-------------------ccct---cagaa
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                14728 13 +     27497 aga-------a-------------------acct---cagaa
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           17186 13 +     26808 aga-------a-------------------ccct---cagaa
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                31920 13 +     46535 aga-------a-------------------ccct---cagaa
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              14642 13 -     29447 aga-------a-------------------ccct---cagaa
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Fukomys_damarensis.KN123630.1                          13891536 13 -  19261668 caa-------a-------------------ccct---tggag
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     209778 13 -    847004 aaa-------a-------------------ccct---cagaC
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           12157 13 -     43889 aaa-------a-------------------ccct---cagaC
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           9226 13 +     27357 AAA-------A-------------------CCCT---CAGAC
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               155114 13 +    324696 caa-------a-------------------tccc---cagag
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           11486 12 -     18683 -ga-------a-------------------ccct---ctaag
i Glis_glis.GliGli_scaffold_79770                       I 2 C 0
s Gorilla_beringei.k141_111300                               4160 13 -     14630 cat-------a-------------------cctt---cagag
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119651259 13 - 195582420 cat-------a-------------------cctt---cagag
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   76225 12 +    118900 -ct-------a-------------------cctt---ccatg
i Graphiurus_murinus.GraMur_scaffold_4493               I 2 C 0
s Hapalemur_alaotrensis.k141_1280836                          691  4 +     10286 AGA-------A-------------------------------
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_1254239                            8841 13 +      9690 aga-------a-------------------ccct---cagaa
i Hapalemur_gilberti.k141_1254239                       C 0 C 0
s Hapalemur_griseus.k141_1387522                             4470 13 +     56096 aga-------a-------------------ccct---cagaa
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        27746  4 -     42470 AGA-------A-------------------------------
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        44344 13 -     54384 aga-------a-------------------ccct---cagaa
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2549920 13 +  31725842 caa-------a-------------------tcct---tggag
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Hoolock_leuconedys.ctg79                                      3560 13 -   7690867 cat-------a-------------------cctt---cagag
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           17822 13 -    119109 caa-------a-------------------ccct---aggag
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              3986 13 +      5897 cat-------a-------------------cctt---cagag
i Hylobates_abbotti.k141_493872                         I 110 C 0
s Hylobates_agilis.k141_624065                                850 13 +      2112 cat-------a-------------------cctt---cagag
i Hylobates_agilis.k141_624065                          C 0 C 0
s Hylobates_klossii.k141_466549                             10426 13 +     11537 cat-------a-------------------cctt---cagag
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14623531 13 -  25970782 cat-------a-------------------cctt---cagag
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                             787 13 -      2977 cat-------a-------------------cctt---cagag
i Hylobates_muelleri.k141_1389047                       I 110 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     4986 13 +     22540 caa-------g-------------------ccct---cagag
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Indri_indri.k141_4418183                                    288 13 -      1457 AGA-------A-------------------CCCT---CAGAA
i Indri_indri.k141_4418183                              C 0 C 0
s Jaculus_jaculus.JH725517.1                              8564533 13 +  11848649 GAA-------A-------------------CCCA---CAGCA
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Lagothrix_lagothricha.k141_12968                          49008 13 -    147782 CAT-------A-------------------CCCT---CAGAG
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lemur_catta.scaffold_1                                258406025 13 - 285822530 aga-------a-------------------ccct---cagaa
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        22788 13 +     39228 aga-------a-------------------ctct---cagaa
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            52163 13 +     63517 aga-------a-------------------ctct---cagaa
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        77413 13 +    116806 aga-------a-------------------gtct---cagaa
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     30427 13 -     33031 aga-------a-------------------ctct---cagaa
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    11813 13 +     22452 caa-------a-------------------tgct---cagag
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lophocebus_aterrimus.ctg55                             19247158 13 +  19376315 cat-------a-------------------cttt---cagag
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            9542 13 +     84689 aga-------a-------------------tcct---cggaa
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3777291 13 +   6799190 aga-------a-------------------tcct---cggaa
i Loris_tardigradus.ctg97                               C 0 C 0
s Macaca_arctoides.k141_2201161                             18833 13 +     74745 cat-------a-------------------cctt---cagag
i Macaca_arctoides.k141_2201161                         C 0 I 65
s Macaca_assamensis.Contig65                             12705354 13 +  12821369 cat-------a-------------------cttt---cagag
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                 999 13 -      3136 cat-------a-------------------cttt---cagag
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           45750 13 +     63263 cat-------a-------------------cctt---cagag
i Macaca_fascicularis.k141_155037                       C 0 I 66
s Macaca_fuscata.k119_599327                                  516 16 -      2568 cat-------a----------------tcacctt---cagag
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 1086 32 -      7381 CAT-------AGATATCAGTTATCATATCACTTT---CAGAG
i Macaca_leonina.k141_467472                            I 62 C 0
s Macaca_maura.k141_251854                                  44323 13 -     79256 cat-------a-------------------cttt---cagag
i Macaca_maura.k141_251854                              I 62 C 0
s Macaca_mulatta.NC_041755.1                            196034431 13 + 196197964 CAT-------A-------------------CTTT---CAGAG
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11444598 13 +  11645122 cat-------a-------------------cttt---cagag
i Macaca_nemestrina.KQ004885.1                          I 62 C 0
s Macaca_nigra.k141_282495                                   3270 13 -     46448 cat-------a-------------------cttt---cagag
i Macaca_nigra.k141_282495                              I 62 C 0
s Macaca_radiata.k141_3680256                                 880 13 -     13212 cat-------a-------------------cctt---cagag
i Macaca_radiata.k141_3680256                           C 0 I 62
s Macaca_siberu.k141_741907                                 14630  5 -     55006 -------------------------------------cagag
i Macaca_siberu.k141_741907                             I 8 C 0
s Macaca_silenus.Contig12                                43839721 32 +  43892939 CAT-------AGATATCAGTTATCATATCACTTT---CAGAG
i Macaca_silenus.Contig12                               I 62 C 0
s Macaca_thibetana.k99_662710                               15909 13 -     24607 cat-------a-------------------cttt---cagag
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               3275 13 -     27140 cat-------a-------------------cttt---cagag
i Macaca_tonkeana.k141_2870633                          I 62 C 0
s Mandrillus_leucophaeus.scaffold125                     43436317 13 -  43563597 cat-------a-------------------cttt---cagag
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4449143 13 -   4543643 cat-------a-------------------cctt---cagag
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               10583 13 +     15977 GGA-------C-------------------CTCT---CAGAG
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1045518 13 -  26018355 GAG-------A-------------------CTCT---CAAGA
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Microcebus_murinus.CM007691.1                          16509030 13 +  47401472 AGA-------A-------------------CCTT---GAGAA
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22818628 13 -  98408828 GGA-------A-------------------CCCT---CAAGA
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miopithecus_ogouensis.k141_2935907                          870 13 +     29742 cat-------a-------------------cttt---cagag
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirza_zaza.k141_226143                                     4430 13 +      8497 aga-------a-------------------ccct---gagaa
i Mirza_zaza.k141_226143                                C 0 C 0
s Mus_caroli.LT608236.1                                  70765119 13 +  92629107 GGA-------A-------------------CCCT---CAGAG
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75488156 13 +  98207768 GGA-------A-------------------TCCT---CAGAG
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67554397 13 +  89017189 GGA-------A-------------------CCCT---CAAAG
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74329335 13 +  97876770 GGA-------A-------------------TCCT---CAGAG
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643              9951 12 +     98495 -ac-------a-------------------tctt---aatgg
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 1 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     88857 13 -    117718 caa-------a-------------------ccgt---tggag
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Nannospalax_galili.KL201303.1                            116987 13 +    362372 ggg-------a-------------------ctgg---tggaa
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               7371 13 +     48152 cac-------a-------------------cttt---cagag
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Nomascus_annamensis.k141_302224                             835 13 +      1516 cat-------a-------------------cctt---cagag
i Nomascus_annamensis.k141_302224                       I 53 C 0
s Nomascus_concolor.k141_49591                               1961 13 +      2014 cat-------a-------------------cctt---cagag
i Nomascus_concolor.k141_49591                          C 0 C 0
s Nomascus_gabriellae.k141_642452                             871 13 +      2851 cat-------a-------------------cctt---ccgag
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_a.k141_595747                                  1509 13 +      4512 cat-------a-------------------cctt---cagag
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nycticebus_bengalensis.LG16                            65565983 13 -  95554990 AGA-------C-------------------TCCT---CAGAA
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            2712 13 +      6470 AGA-------C-------------------TCCT---CAGAA
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65668321 13 +  89412551 aga-------c-------------------tcct---cagaa
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4994845 11 -  23139505 CAA-------A-------------------CCCT---CAA--
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3684396 13 +  10294119 CAA-------A-------------------CCTT---TGGAG
i Octodon_degus.JH651621.1                              C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  123885 13 +    145789 GGA-------A-------------------CCCT---CAAGA
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  35657 13 +     62360 GTA-------C-------------------CCCT---CAAAT
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141874471 13 + 163896628 caa-------a-------------------cgct---cagag
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       37874 13 +     38679 aaa-------a-------------------ccCT---CAGAC
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18007302 13 -  38779656 AAA-------A-------------------CCCT---CAGAC
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Pan_paniscus.CM003386.1                               127573513 20 - 205426864 CATTACGATAA-------------------CCTT---CAGAG
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120150666 20 - 196562556 CATTACGATAA-------------------CCTT---CAGAG
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Papio_anubis.CM001492.2                               188155108 13 - 188283584 CAT-------A-------------------CTTT---CAGAG
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             3425 13 +      5367 cat-------a-------------------cttt---cagag
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47512496 13 +  47705337 cat-------a-------------------cttt---gagag
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 66474 13 -    104429 cat-------a-------------------cttt---cagag
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    5006 13 +     14967 cat-------a-------------------cttt---gagag
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                  867 13 -      7628 cat-------a-------------------cttt---cagag
i Papio_ursinus.k141_1345919                            C 0 C 0
s Perodicticus_ibeanus.k141_117958                           3916 12 -     23713 aga-------a-------------------ccct----agag
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            23214 12 -     27972 aga-------a-------------------ccct----agag
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      42463  6 -     45160 ---------------------------------A---CAGGG
i Perognathus_longimembris.PerPac_flattened_line_22291  I 2 C 0
s Peromyscus_maniculatus.KI615518.1                       4948843 13 -   8017169 GAA-------A-------------------TTCT---CAAAA
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    11075 13 -     36578 caa-------g-------------------cccc---tgaag
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Piliocolobus_badius.k141_1987485                            893 13 -      5908 cat-------a-------------------cttt---cagag
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       1513 13 -     17985 cat-------a-------------------cttt---cagag
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                             880 13 +      7694 cat-------a-------------------cttt---cagag
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26739358 13 +  26888534 CAT-------A-------------------CTTT---CAGAG
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pithecia_albicans.k141_991845                             42490 13 -     61926 cat-------a-------------------ccct---cagag
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        23921 13 +     78826 cat-------a-------------------ccct---cagag
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              7870 13 -     15800 cat-------a-------------------ccct---cagag
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        11068 13 -     16101 cat-------a-------------------ccct---cagag
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          4377 13 +      9673 cat-------a-------------------ccct---cagag
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13473373 13 -  19735023 cat-------a-------------------ccct---cagag
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           12279 13 -     31692 cat-------a-------------------ccct---cagag
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       21715 13 +     44506 cat-------a-------------------ccct---aagag
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        21927 13 +     67491 cat-------a-------------------ccct---aagag
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      12166 13 -     98129 cat-------a-------------------ccct---aagag
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     21766 13 +    147771 cat-------a-------------------ccct---aagag
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        22021 13 -     23762 cat-------a-------------------ccct---aagag
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          2487 13 -     55515 cat-------a-------------------ccct---aagag
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         21840 13 +    152463 cat-------a-------------------ccct---aagag
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      8600 13 +      8943 cat-------a-------------------ccct---aagag
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                         11562 13 +    134592 cat-------a-------------------ccct---aagag
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          22150 13 -     75465 cat-------a-------------------ccct---aagag
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              186045 13 -    373494 CAT-------A-------------------CCTT---CAGAG
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19806693 13 +  19899266 cat-------a-------------------cctt---cagag
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               4615 13 -     15069 cat-------a-------------------cttt---cagag
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              4749 13 +     14865 cat-------a-------------------cttt---cagag
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6847406 13 +  12164890 aga-------a-------------------ccct---cagaa
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    666628 13 -   2312742 aga-------a-------------------ccct---cagaa
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         2455 13 +     11805 aga-------a-------------------ccct---cagaa
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           41791 13 +     52369 aga-------a-------------------ccct---cagaa
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         34181 13 -     44753 aga-------a-------------------ccct---cagaa
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            16101 13 +     27322 aga-------a-------------------ccct---cagaa
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       15737 13 -     53241 aga-------a-------------------ccct---cagaa
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         38009 13 -     48185 aga-------a-------------------ccct---cagaa
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           32133 13 +     77221 GGA-------C-------------------CCCT---CAGAG
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pygathrix_cinerea.k141_374971                             28733 13 +     56732 cac-------a-------------------cttt---cagag
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6805224 13 +   6970761 cac-------a-------------------cttt---cagag
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             4618 13 +     18040 cac-------a-------------------cttt---cagag
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rattus_norvegicus.chr11                                13914162 13 +  90463843 GGA-------A-------------------CTCT---CAGAG
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinopithecus_bieti.k119_1391695                            846 13 -      1866 cac-------a-------------------cttt---cagag
i Rhinopithecus_bieti.k119_1391695                      C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206376503 13 - 206558726 cac-------a-------------------cttt---cagag
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44855403 13 -  45163003 cac-------a-------------------cttt---cagag
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15671578 13 -  43202129 CAT-------A-------------------CCCt---aagaa
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        3495 13 +     34089 cat-------a-------------------ccct---cagaa
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              3436 13 -     60842 cat-------a-------------------ccct---cagaa
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              3531 13 +     67014 cat-------a-------------------ccct---cagaa
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              3509 13 +     60816 cat-------a-------------------ccct---cagaa
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 3446 13 -     76454 cat-------a-------------------ccct---cagaa
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17340171 13 -  30362882 cat-------a-------------------ccct---cagag
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         19530 13 -     62485 cat-------a-------------------ccct---cagag
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Semnopithecus_entellus.k141_1572367                        2230 13 +     15331 cat-------a-------------------cttt---cagag
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       7627 13 +     20762 cat-------a-------------------cttt---cagag
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         117625 13 +    130994 cat-------a-------------------cttt---cagag
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           36416 13 +     46263 cat-------a-------------------cttt---cagag
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     29530 13 +     42640 cat-------a-------------------cttt---cagag
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        12574 13 +     30600 cat-------a-------------------cttt---cagag
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   98427 13 -    120886 GAA-------A-------------------CCCT---CAAAT
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        13788 13 -  13920577 cat-------a-------------------cctt---cagag
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tarsius_lariang.k141_609102                               25317 13 +     42269 caa-------t-------------------ccct---cagat
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               58633 13 +     65473 caa-------t-------------------ccct---cagat
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194006635 13 - 194193292 CAT-------A-------------------CTTT---CAGAG
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             38141 13 -     47444 caa-------a-------------------ccct---tgaaa
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Trachypithecus_auratus.k141_738098                        25737 13 +     38948 cat-------a-------------------cttt---cagag
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   19464 13 -     32910 cat-------a-------------------cttt---cagag
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                       851 13 -     12939 cat-------a-------------------cttt---cagag
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                        786 13 -     14244 cat-------a-------------------cttt---cagag
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           42184 13 -     54611 cat-------a-------------------cttt---cagag
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_878600                        1014 13 +      1165 cat-------a-------------------cttt---cagag
i Trachypithecus_germaini.k141_878600                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     2162 13 -     15592 cat-------a-------------------cttt---cagag
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                           819 13 +     14371 cat-------a-------------------cttt---cagag
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  50571 13 +     51589 cat-------a-------------------cttt---cagag
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       13752 13 +     14732 cat-------a-------------------cttt---cagag
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       4224 13 -     28054 cat-------a-------------------cttt---cagag
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44659024 13 -  44834318 cat-------a-------------------cttt---cagag
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       1327 13 +     13828 cat-------a-------------------cttt---cagag
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tupaia_chinensis.KB320831.1                             2791642 12 -   3938065 caa-------a-------------------c-ct---cagag
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    3910 12 +     13056 caa-------a-------------------c-ct---cagag
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Varecia_rubra.k141_432109                                  4113 13 -     20643 aga-------a-------------------ccct---cagaa
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             23654 13 -     33872 aga-------a-------------------ccct---cagaa
i Varecia_variegata.k141_775891                         C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     14063 13 -     20485 aaa-------a-------------------ccca---cagag
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
e Eptesicus_fuscus.JH977687.1                             4702143 415 +   6522550 I
e Macroglossus_sobrinus.MacSob_scaffold_879                699974 431 +    802869 I
e Sorex_araneus.JH798170.1                               17748590 843 -  27805282 I
e Dinomys_branickii.DinBra_scaffold_1996                   156356 54 +    228994 I
e Erinaceus_europaeus.JH835290.1                         11530833 462 +  16010500 I
e Chaetophractus_vellerosus.ChaVel_scaffold_1070855          1230  0 -      1715 I
e Aplodontia_rufa.AprRuf_scaffold_156013                     2579  2 +      5067 I
e Suricata_suricatta.SurSur_flattened_line_20339            25319 430 +     62062 I
e Ziphius_cavirostris.ZipCav_flattened_line_127025           5301 442 -      8775 I
e Zalophus_californianus.ZalCal_flattened_line_4097        212018 448 -    227762 I
e Vulpes_lagopus.VulLag_flattened_line_2045                135489 449 -    281493 I
e Vicugna_pacos.KN269600.1                                1523037 433 -   2331223 I
e Ursus_maritimus.KK498671.1                              6512543 460 +  28682327 I
e Uropsilus_gracilis.UroGra_scaffold_4143_0                 24925  0 -     25548 I
e Tursiops_truncatus.MRVK01000923.1                      69311805 441 -  96451834 I
e Trichechus_manatus.JH594618.1                          16079679 1700 +  31416278 I
e Tragulus_javanicus.TraJav_scaffold_14717                   3584 419 +     90398 I
e Tonatia_saurophila.TonSau_scaffold_3334                  134241 421 -    259118 I
e Tolypeutes_matacus.TolMat_scaffold_269431                  1990 2406 +      6782 I
e Tapirus_terrestris.TapTer_scaffold_14939                  55756 434 +     99546 I
e Tapirus_indicus.TapInd_scaffold_176                      805095 435 +   1148477 I
e Tamandua_tetradactyla.TamTet_scaffold_26877               13106 433 +     45698 I
e Tadarida_brasiliensis.TadBra_scaffold_145589               4174 407 -      6213 I
e Sus_scrofa.CM000824.4                                 189270228 447 + 218635234 I
e Spilogale_gracilis.SpiGra_flattened_line_905             232751 445 -    276980 I
e Solenodon_paradoxus.SolPar_flattened_line_1012            16376 416 +    739146 I
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   29737 434 -    114521 I
e Saiga_tatarica.SaiTat_scaffold_82192                       5983 428 +     12214 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                17647 435 +    109198 I
e Rhinolophus_sinicus.LVEH01000179.1                      1786172 430 +   2252614 I
e Rangifer_tarandus.RanTarSib_scaffold_24239                14178 431 +     68503 I
e Puma_concolor.QAVW01000427.1                          131532079 431 - 161321710 I
e Pteropus_vampyrus.KN525959.1                             602305 437 -   3946241 I
e Pteropus_alecto.KB031157.1                             13244354 438 -  17261082 I
e Pteronura_brasiliensis.PteBra_flattened_line_1343        243991 454 -    344369 I
e Pteronotus_parnellii.KE867983.1                            2230 422 -     27784 I
e Procavia_capensis.ProCapCap_scaffold_15315                74302 1939 +     78963 I
e Platanista_gangetica.PlaMin_flattened_line_72990           3771 443 +     21690 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            95224 410 +    112873 I
e Phocoena_phocoena.PhoPho_flattened_line_11948            119703 443 -    122454 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113416 447 -    135482 I
e Pantholops_hodgsonii.KE114631.1                         1064538 417 -   1292953 I
e Panthera_tigris.KE721879.1                              5025497 431 -   6340057 I
e Panthera_pardus.KV860323.1                              3635849 432 +  18214204 I
e Panthera_onca.PanOnc_flattened_line_1615                  32116 431 +    295523 I
e Ovis_canadensis.OviCan_scaffold_6251                      76891 417 +    140051 I
e Ovis_aries.CM001582.2                                 134075677 417 - 275406953 I
e Otocyon_megalotis.JAEUCK010005121.1                      305421 444 -    505867 I
e Orycteropus_afer.OryAfe_flattened_line_13509              41471 1764 -     66828 I
e Orcinus_orca.KB316965.1                                 7223086 443 -   7562323 I
e Okapia_johnstoni.LVCL01S0017931.1                         35255 573 +     78940 I
e Odocoileus_virginianus.KZ101650.1                       1078100 432 +   1425656 I
e Odobenus_rosmarus.KB229369.1                             677288 443 -   3126709 I
e Nyctereutes_procyonoides.CAJHUB010000786.1                28082 449 +   3668941 I
e Noctilio_leporinus.NocLep_scaffold_12062                  47676 415 +     94413 I
e Neophocaena_asiaeorientalis.KZ688543.1                  3949402 443 -   4490290 I
e Neomonachus_schauinslandi.NINY01007774.1                4482632 454 -  14209539 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3432 432 -      8794 I
e Myotis_myotis.MyoMyo_scaffold_6123                         8554 416 +     66751 I
e Myotis_lucifugus.GL429887.1                             3463359 417 -   3747815 I
e Myotis_davidii.KB114863.1                               5017463 416 +   6462685 I
e Myotis_brandtii.KE161952.1                               965772 418 +   8389877 I
e Mustela_putorius.JH417978.1                             4421898 453 -  28371801 I
e Murina_feae.MurFea_scaffold_2254                          17451 414 -    100666 I
e Mungos_mungo.MunMun_flattened_line_8729                  142653 430 -    168139 I
e Moschus_moschiferus.MosMos_scaffold_146101                 2972 432 -      4346 I
e Mormoops_blainvillei.MorMeg_scaffold_2952                159560 424 +    265003 I
e Monodon_monoceros.MonMon_M_scaffold_5598                 144790 442 +    154973 I
e Mirounga_angustirostris.MirAng_flattened_line_8852         9033 661 -    104932 I
e Miniopterus_schreibersii.MinSch_scaffold_24116            32480 421 +     45743 I
e Miniopterus_natalensis.LDJU01000022.1                   8207809 420 +  10048721 I
e Micronycteris_hirsuta.MicHir_scaffold_37978               21050 428 -     32043 I
e Microgale_talazaci.MicTal_scaffold_34660                  29351 1133 -     48017 I
e Mellivora_capensis.MelCap_flattened_line_146202             327 452 -      1999 I
e Megaderma_lyra.MegLyr_scaffold_3562                       62628 576 -    234502 I
e Manis_pentadactyla.KN017078.1                             34538 441 +     58827 I
e Manis_javanica.JSZB01003966.1                            144466 438 +    252755 I
e Lycaon_pictus.CM007556.1                               11085089 449 +  39895028 I
e Loxodonta_africana.GL010040.1                          20589215 1702 -  62548349 I
e Lipotes_vexillifer.KE558548.1                            134353 444 +   3060487 I
e Leptonychotes_weddellii.KB714749.1                      3083728 458 -   3498232 I
e Lasiurus_borealis.LasBor_scaffold_5102                   111937 417 -    115756 I
e Kogia_breviceps.KogBre_flattened_line_35920               22021 443 +     37189 I
e Inia_geoffrensis.IniGeo_flattened_line_66725               7195 437 +     17520 I
e Hyaena_hyaena.HyaHya_flattened_line_20729                 14013 474 -     67322 I
e Hipposideros_galeritus.HipGal_scaffold_104691              5946 409 -      9143 I
e Hipposideros_armiger.JXIK01001085.1                      276788 408 -    477199 I
e Hippopotamus_amphibius.HipAmp_scaffold_1308              145449 430 +    277961 I
e Heterohyrax_brucei.HetBruBak_scaffold_25354               54438 1939 +     73687 I
e Hemitragus_hylocrius.HemHyl_scaffold_16669                25884 416 -     91191 I
e Helogale_parvula.HelPar_flattened_line_22962              14960 432 +     53719 I
e Giraffa_tippelskirchi.LVKQ01S012154.1                    179385 717 -    189561 I
e Felis_nigripes.FelNig_flattened_line_8080                 18925 427 +     52776 I
e Felis_catus_fca126.CM031420.1                         129277790 427 - 158578461 I
e Eubalaena_japonica.EubJap_flattened_line_7756             59838 466 +     89355 I
e Eschrichtius_robustus.EscRob_flattened_line_685          313408 442 +    330699 I
e Equus_przewalskii.ATBW01073585.1                          11036 704 +     92910 I
e Equus_caballus.CM000402.2                              13349546 704 +  41866177 I
e Equus_asinus.JREZ01000062.1                             5851044 703 -   7175178 I
e Enhydra_lutris.KZ291749.1                              85869516 453 +  99434291 I
e Elephantulus_edwardii.JH947210.1                        7804622 10712 +  15467074 I
e Elaphurus_davidianus.JRFZ01086400.1                     1489870 432 +   1727528 I
e Eidolon_helvum.KE772537.1                                 10556 435 +     24177 I
e Echinops_telfairi.JH980316.1                           22994071  0 -  44670279 C
e Diceros_bicornis.DicBicMic_scaffold_9545                    953 1024 +    151128 I
e Dicerorhinus_sumatrensis.PEKH010003161.1                 320309 1016 +    993696 I
e Desmodus_rotundus.KZ672188.1                           18697183 419 -  18957592 I
e Delphinapterus_leucas.KZ290064.1                       80035206 438 -  96802777 I
e Dasypus_novemcinctus.JH568778.1                          180040 2424 -   6883506 I
e Cryptoprocta_ferox.CryFer_flattened_line_19014            49751 433 -     70449 I
e Crocidura_indochinensis.CroInd_scaffold_38409             18067 408 -     19186 I
e Craseonycteris_thonglongyai.CraTho_scaffold_22679         37588 826 -     40477 I
e Condylura_cristata.JH655880.1                          60611131 297 +  78930452 I
e Choloepus_hoffmanni.KN194586.1                           760141 439 +    964067 I
e Choloepus_didactylus.ChoDid_scaffold_36182                14830 439 -     21363 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_160623         1406 1024 -      9338 I
e Catagonus_wagneri.CatWag_scaffold_1305                   157166 412 -    276539 I
e Carollia_perspicillata.CarPer_scaffold_4436               57873 420 +     67245 I
e Capra_hircus.CM004562.1                               135704839 417 - 157403528 I
e Capra_aegagrus.CM003214.1                              21323612 417 + 157394656 I
e Canis_lupus_orion.HG994411.1                           16452657 449 -  44759192 I
e Canis_lupus_familiaris.chr31                           11085633 449 +  39895921 I
e Canis_lupus_dingo.QKWQ01001993.1                       11263104 449 -  35597290 I
e Canis_lupus_VD.CanFam_VD_scaffold_16982                   11461 449 +     87036 I
e CanFam4.chr31                                          11516443 449 +  39901454 I
e Camelus_ferus.KB016973.1                                2971365 436 +   6889770 I
e Camelus_dromedarius.KN271192.1                           395631 437 -  15254737 I
e Camelus_bactrianus.KN276303.1                           3217927 436 -   8989139 I
e Bubalus_bubalis.KI419065.1                              1229342 431 -   1914593 I
e Bos_taurus.CM000177.6                                 136293586 432 - 158972876 I
e Bos_mutus.JH883513.1                                     570227 432 -    998990 I
e Bos_indicus.CM003021.1                                138137853 432 - 161108492 I
e Bison_bison.KN264915.1                                  6557614 432 +   6870073 I
e Beatragus_hunteri.BeaHun_scaffold_21644                   41603 412 -     72089 I
e Balaenoptera_bonaerensis.DF502048.1                        3753 444 -     13118 I
e Balaenoptera_acutorostrata.KI537095.1                  26378522 443 +  51448160 I
e Artibeus_jamaicensis.ArtJam_scaffold_41619                 7075 421 -     29036 I
e Antilocapra_americana.AntAmePen_scaffold_42841            29107 427 +     33004 I
e Anoura_caudifer.AnoCau_scaffold_422                      388679 416 -    631301 I
e Ammotragus_lervia.NIVO01013474.1                        3518508 445 +   4113121 I
e Ailurus_fulgens.LNAC01000003.1                          7091784 657 -  16596857 I
e Ailuropoda_melanoleuca.LNAT01000321.1                  10655057 459 +  23371972 I
e Acinonyx_jubatus.LLWD01000356.1                         2031739 430 +   3721120 I
e Hylobates_pileatus_a.tarseq_592                             33311  5 -     60944 I
e Xerus_inauris.XerIna_scaffold_7898                       125752  2 -    134049 I
e Spermophilus_dauricus.KZ294190.1                        2238652  2 +   2842873 I
e Marmota_marmota.CZRN01000005.1                         36872571  2 +  64221397 I
e Ictidomys_tridecemlineatus.JH393315.1                   7124732  2 +  13083262 I
e Alouatta_caraya.k141_5460                                 10148  0 -     11521 C
e Nomascus_siki_b.tarseq_80                             24175  0 -  18771707 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               10788 8 +    209709 ggtagagg
s Acomys_cahirinus.AcoCah_scaffold_1625                    111141 8 -    189883 ATTAGAAG
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 I 1
s Allactaga_bullata.AllBul_scaffold_70162                   11815 8 -     22067 GGTAGAAG
i Allactaga_bullata.AllBul_scaffold_70162               C 0 I 7
s Allenopithecus_nigroviridis.k141_3103728                   1390 8 +      1665 ggcagagg
i Allenopithecus_nigroviridis.k141_3103728              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                          866 8 -     29318 ggcagagg
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_21674                           1083 8 -      1421 ggcagagg
i Allochrocebus_preussi.k141_21674                      C 0 C 0
s Allochrocebus_solatus.k141_371672                           760 8 -     80423 ggcagagg
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             9052 8 -     18050 gatagaag
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                 10148 3 -     11521 -----AAG
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              9729 8 -     21359 gatagaag
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1029606                                 988 8 -      1200 GATAGAAG
i Alouatta_juara.k141_1029606                           I 13 n 8
s Alouatta_macconnelli.k141_1331706                          9025 8 -     10438 gatagaag
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            5681 8 +      7047 gatagaag
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             8961 8 +     10410 gatagaag
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            2771 8 -      4927 gagagaag
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             5700 8 +      6429 gatagaag
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Aotus_azarae.k141_3170768                                 61409 8 +     78111 gatagaag
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            4350 8 +     22701 gatagaag
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5748307 8 +   9889416 GATAGAAG
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             4892 8 -    104377 gatagaag
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               4898 8 +     23246 gatagaag
i Aotus_vociferans.k141_718647                          C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      16701 5 +     17483 GGTA---G
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9538157 8 +  39197703 gatagaag
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             59428 8 +     85812 GATAGAAG
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                10440 8 +     89302 gatagaag
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             14945 8 -     58268 gatagaag
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             62936 8 +    119057 gatagaag
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               4905 8 -     25888 gatagaag
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 5539 8 -     16375 ggtagcgg
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              1859 8 +      2719 ggtagcgg
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Cacajao_ayresi.k141_724503                               112798 8 -    171031 gatagaag
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 11826 8 +    125063 gatagaag
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                13871 8 -    216513 gatagaag
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        6411 8 -    134917 gatagaag
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Capromys_pilorides.CapPil_scaffold_979108                   805 8 -      1248 ggaagata
i Capromys_pilorides.CapPil_scaffold_979108             C 0 C 0
s Carlito_syrichta.NW_007248099.1                          307846 8 +    345090 GATAGAGT
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   29511 8 +     33760 agtagagg
i Castor_canadensis.CasCan_scaffold_47037               C 0 I 2
s Cavia_aperea.AVPZ01000278.1                            15785454 8 -  24422027 NNNNNNNN
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15797388 8 -  24440124 actagatg
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       175579 8 +    436027 actagatg
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18889641 8 -  29618158 gatagaag
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 7185 8 -     26817 gatagaag
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                11425 8 +     25043 gatagaag
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         6879 8 +     21754 gatagagt
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6554082 8 +   6739814 ggcagagg
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      25559 8 +     60454 ggcagagg
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                           764 8 -     21101 ggcagagg
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         58074 8 -    107033 ggcagagg
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                         966 8 -     17608 ggcagagg
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          28464 8 +     30494 ggcagagg
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          57307 8 -     59240 ggcagagg
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          1008 8 +     16677 ggcagagg
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           23166 8 +     35983 ggcagagg
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11989697 8 +  12117833 ggcagagg
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46476452 8 +  46592721 ggcagagg
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      40003 8 -     45581 ggcagagg
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       1012 8 +     35577 ggcagagg
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                         785 8 -     25661 ggcagagg
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                         763 8 -     17744 ggcagagg
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        20372 8 +     37128 ggcagagg
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           57833 8 -     68416 ggtagagg
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            6876 8 +     13308 ggtacagg
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             4441 8 -     18223 gatagaag
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             21464 8 +     25473 gatagaag
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           40499 8 +     57117 gatagaag
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          45178 8 +     54541 gatagaag
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15960599 8 +  43084221 ggtagatg
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         70000 8 +    196370 gatagaag
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          14180 8 +     40510 gatagaag
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15137926 8 -  15256731 ggcagagg
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      32973 8 -     53260 ggcagagg
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101143536 8 + 101219884 GGCAGAGG
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10885301 8 +  10971483 GGCAGAGG
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147663465 8 + 156195979 ggcagagg
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            15449 8 +     23629 ggcagagg
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 277107 8 -    399297 GTTAGAAA
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 I 1
s Cricetulus_griseus.LT883672.1                          53027793 8 +  72327488 GTTAGAAG
i Cricetulus_griseus.LT883672.1                         C 0 I 1
s Ctenodactylus_gundi.CteGun_scaffold_447                  207013 4 -    956709 agga----
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 I 2
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 29567 8 -     67205 ggtagaca
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                16607 8 +     26546 ggtggatg
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             57699 8 -    236241 ggtagatg
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16843686 8 +  31942871 gatagagg
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Dipodomys_ordii.KN672545.1                              3655024 7 +   4240102 AATACAG-
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 26660 7 +     28912 AATACAG-
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                34945 8 -     73477 gataaatg
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        238351 8 -    369425 GGTAGAAG
i Ellobius_lutescens.LOEQ01003611.1                     C 0 I 1
s Ellobius_talpinus.LOJH01090055.1                           5461 8 -      7838 ggtagaag
i Ellobius_talpinus.LOJH01090055.1                      C 0 I 1
s Erythrocebus_patas.Contig8                             48770106 8 -  48907691 ggcagagg
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eulemur_albifrons.k141_715837                              3877 8 +     13586 ggtagagg
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               3814 8 -      6809 ggtaatgg
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            10290 8 +     36558 ggtagagg
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             6606 8 +     60246 ggtagagg
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                10085 8 +    109717 ggtagagg
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               14468 8 +     16540 ggtagagg
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                14741 8 +     27497 ggtagagg
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           17199 8 +     26808 ggtagagg
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                31933 8 +     46535 ggtagagg
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              14655 8 -     29447 ggtagagg
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Fukomys_damarensis.KN123630.1                          13891549 8 -  19261668 ggtagatg
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     209791 5 -    847004 ATCT---T
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           12170 5 -     43889 ATCT---T
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           9239 5 +     27357 GGCT---G
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               155127 8 +    324696 ggtagagg
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           11498 8 -     18683 ggtagagg
i Glis_glis.GliGli_scaffold_79770                       C 0 I 219
s Gorilla_beringei.k141_111300                               4173 8 -     14630 ggtagagg
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119651272 8 - 195582420 ggtagagg
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   76237 8 +    118900 agtagagg
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 I 210
s Hapalemur_gilberti.k141_1254239                            8854 8 +      9690 ggtagagg
i Hapalemur_gilberti.k141_1254239                       C 0 C 0
s Hapalemur_griseus.k141_1387522                             4483 8 +     56096 ggtagagg
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_occidentalis.k141_797938                        44357 8 -     54384 ggtagagg
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2549933 8 +  31725842 gttagatg
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Hoolock_leuconedys.ctg79                                      3573 8 -   7690867 ggtagagg
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           17835 8 -    119109 ggtagacg
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              3999 8 +      5897 ggtagagg
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_624065                                863 8 +      2112 ggtagagg
i Hylobates_agilis.k141_624065                          C 0 C 0
s Hylobates_klossii.k141_466549                             10439 8 +     11537 ggtagagg
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14623544 8 -  25970782 ggtagagg
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                             800 8 -      2977 ggtagagg
i Hylobates_muelleri.k141_1389047                       C 0 I 40
s Hystrix_cristata.HysCri_scaffold_50788                     4999 8 +     22540 ggtagatg
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Indri_indri.k141_4418183                                    301 8 -      1457 GGTAGAGG
i Indri_indri.k141_4418183                              C 0 C 0
s Jaculus_jaculus.JH725517.1                              8564546 8 +  11848649 GGTAGAAG
i Jaculus_jaculus.JH725517.1                            C 0 I 7
s Lagothrix_lagothricha.k141_12968                          49021 8 -    147782 GATAGAAG
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lemur_catta.scaffold_1                                258406038 8 - 285822530 ggtagagg
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        22801 8 +     39228 ggtagagg
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            52176 8 +     63517 ggtagagg
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        77426 8 +    116806 ggtggagg
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     30440 8 -     33031 ggtagagg
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    11826 7 +     22452 ggcaaag-
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lophocebus_aterrimus.ctg55                             19247171 8 +  19376315 ggcagagg
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            9555 5 +     84689 ggta---g
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3777304 5 +   6799190 ggta---g
i Loris_tardigradus.ctg97                               C 0 C 0
s Macaca_arctoides.k141_2201161                             18911 8 +     74745 GGCAGAGG
i Macaca_arctoides.k141_2201161                         I 65 C 0
s Macaca_assamensis.Contig65                             12705367 8 +  12821369 ggcagagg
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                1012 8 -      3136 ggcagagg
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           45829 8 +     63263 ggcagagg
i Macaca_fascicularis.k141_155037                       I 66 C 0
s Macaca_fuscata.k119_599327                                  532 8 -      2568 ggcagagg
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 1118 8 -      7381 GGCAGAGG
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  44336 8 -     79256 ggcagagg
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196034444 8 + 196197964 GGCAGAGG
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11444611 8 +  11645122 gGCAGAGG
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   3283 8 -     46448 ggcagagg
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                 955 8 -     13212 GGCAGAGG
i Macaca_radiata.k141_3680256                           I 62 C 0
s Macaca_siberu.k141_741907                                 14635 8 -     55006 ggcagagg
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43839753 8 +  43892939 GGCAGAGG
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               15922 8 -     24607 ggcagagg
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               3288 8 -     27140 ggcagagg
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43436330 8 -  43563597 ggcagagg
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4449156 8 -   4543643 ggcagagg
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               10596 8 +     15977 GTTAGAAT
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 I 1
s Mesocricetus_auratus.KB708139.1                         1045531 8 -  26018355 ATTAGAAA
i Mesocricetus_auratus.KB708139.1                       C 0 I 1
s Microcebus_murinus.CM007691.1                          16509043 8 +  47401472 GGTAGAGG
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22818641 8 -  98408828 GGTCGAAG
i Microtus_ochrogaster.CM001673.1                       C 0 I 1
s Miopithecus_ogouensis.k141_2935907                          883 8 +     29742 ggcagaag
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirza_zaza.k141_226143                                     4443 8 +      8497 ggtaaagg
i Mirza_zaza.k141_226143                                C 0 C 0
s Mus_caroli.LT608236.1                                  70765132 8 +  92629107 GTTAGGAG
i Mus_caroli.LT608236.1                                 C 0 I 1
s Mus_musculus.chr16                                     75488169 8 +  98207768 GTTAGGAG
i Mus_musculus.chr16                                    C 0 I 1
s Mus_pahari.LT608305.1                                  67554410 8 +  89017189 GTTGGGAG
i Mus_pahari.LT608305.1                                 C 0 I 1
s Mus_spretus.CM004110.1                                 74329348 8 +  97876770 GTTAGGAG
i Mus_spretus.CM004110.1                                C 0 I 1
s Muscardinus_avellanarius.MusAve_scaffold_9643              9963 8 +     98495 agtacaag
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 I 256
s Myocastor_coypus.MyoCoy_scaffold_3653                     88870 8 -    117718 ggtagaca
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Nannospalax_galili.KL201303.1                            117000 8 +    362372 attagaaa
i Nannospalax_galili.KL201303.1                         C 0 I 2
s Nasalis_larvatus.k141_153429                               7384 8 +     48152 ggcagagg
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Nomascus_annamensis.k141_302224                             848 8 +      1516 ggtagagg
i Nomascus_annamensis.k141_302224                       C 0 C 0
s Nomascus_concolor.k141_49591                               1974 8 +      2014 ggtagagg
i Nomascus_concolor.k141_49591                          C 0 N 0
s Nomascus_gabriellae.k141_642452                             884 8 +      2851 ggtagagg
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_a.k141_595747                                  1522 8 +      4512 ggtagagg
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nycticebus_bengalensis.LG16                            65565996 5 -  95554990 GGTA---G
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            2725 5 +      6470 GGTA---G
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65668334 5 +  89412551 ggta---g
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4994856 1 -  23139505 ----A---
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3684409 8 +  10294119 GATAGATA
i Octodon_degus.JH651621.1                              C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  123898 8 +    145789 GGTAGAAG
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 I 1
s Onychomys_torridus.OnyTor_scaffold_12578                  35670 8 +     62360 GTTAGAAG
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 I 1
s Oryctolagus_cuniculus.CM000803.1                      141874484 7 + 163896628 ggtaaag-
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       37887 5 +     38679 ATCT---T
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18007315 5 -  38779656 ATCT---T
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Pan_paniscus.CM003386.1                               127573533 8 - 205426864 GGTAGAGG
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120150686 8 - 196562556 GGTAGAGG
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Papio_anubis.CM001492.2                               188155121 8 - 188283584 GGCAGAGG
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             3438 8 +      5367 ggcagagg
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47512509 8 +  47705337 ggcagagg
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 66487 8 -    104429 ggcagagg
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    5019 8 +     14967 ggcagagg
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                  880 8 -      7628 ggcagagg
i Papio_ursinus.k141_1345919                            C 0 C 0
s Perodicticus_ibeanus.k141_117958                           3928 5 -     23713 ggta---g
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            23226 5 -     27972 ggta---g
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      42469 7 -     45160 AATACAG-
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4948856 8 -   8017169 GTTAGAAG
i Peromyscus_maniculatus.KI615518.1                     C 0 I 1
s Petromus_typicus.PetTyp_scaffold_33007                    11088 8 -     36578 gaggaatg
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Piliocolobus_badius.k141_1987485                            906 8 -      5908 ggcagagg
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       1526 8 -     17985 ggcagagg
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                             893 8 +      7694 ggcagagg
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26739371 8 +  26888534 GGCAGAGG
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pithecia_albicans.k141_991845                             42503 8 -     61926 gatagaag
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        23934 8 +     78826 gatagaag
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              7883 8 -     15800 gatagaag
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        11081 8 -     16101 gatagaag
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          4390 8 +      9673 gatagaag
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13473386 8 -  19735023 gatagaag
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           12292 8 -     31692 gatagaag
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       21728 8 +     44506 gatagaag
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        21940 8 +     67491 gatagaag
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      12179 8 -     98129 gatagaag
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     21779 8 +    147771 gatagaag
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        22034 8 -     23762 gatagaag
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          2500 8 -     55515 gatagaag
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         21853 8 +    152463 gatagaag
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      8613 8 +      8943 gatagaag
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                         11575 8 +    134592 gatagaag
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          22163 8 -     75465 gatagaag
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              186058 8 -    373494 GGTAGAGG
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19806706 8 +  19899266 ggtagagg
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               4628 8 -     15069 ggcagagg
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              4762 8 +     14865 ggcagagg
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6847419 8 +  12164890 ggtagagg
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    666641 8 -   2312742 ggtagcgg
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         2468 8 +     11805 ggtagcgg
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           41804 8 +     52369 ggtagcgg
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         34194 8 -     44753 ggtagcgg
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            16114 8 +     27322 ggtagcgg
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       15750 8 -     53241 ggtagcgg
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         38022 8 -     48185 ggtagcgg
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           32146 8 +     77221 GTTAGAAC
i Psammomys_obesus.NESX01026517.1                       C 0 I 1
s Pygathrix_cinerea.k141_374971                             28746 8 +     56732 ggcagagg
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6805237 8 +   6970761 ggcagagg
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             4631 8 +     18040 ggcagagg
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rattus_norvegicus.chr11                                13914175 8 +  90463843 GTTAGGAG
i Rattus_norvegicus.chr11                               C 0 I 1
s Rhinopithecus_bieti.k119_1391695                            859 8 -      1866 ggcagagg
i Rhinopithecus_bieti.k119_1391695                      C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206376516 8 - 206558726 ggcagagg
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44855416 8 -  45163003 ggcagagg
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15671591 8 -  43202129 gacagaag
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        3508 8 +     34089 gacagaag
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              3449 8 -     60842 gacagaag
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              3544 8 +     67014 gacagaag
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              3522 8 +     60816 gacagaag
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 3459 8 -     76454 gacagaag
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17340184 8 -  30362882 gatagaag
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         19543 8 -     62485 gatagaag
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Semnopithecus_entellus.k141_1572367                        2243 8 +     15331 ggcagagg
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       7640 8 +     20762 ggcagagg
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         117638 8 +    130994 ggcagagg
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           36429 8 +     46263 ggcagagg
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     29543 8 +     42640 ggcagagg
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        12587 8 +     30600 ggcagagg
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   98440 8 -    120886 GTTAGAAA
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 I 1
s Symphalangus_syndactylus.tarseq_24                        13801 8 -  13920577 ggtagagg
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tarsius_lariang.k141_609102                               25330 8 +     42269 gataaagt
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               58646 8 +     65473 gataaagt
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194006648 8 - 194193292 GGCAGAGG
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             38154 8 -     47444 gacagatg
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Trachypithecus_auratus.k141_738098                        25750 8 +     38948 ggcagagg
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   19477 8 -     32910 ggcagaga
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                       864 8 -     12939 ggcagagg
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                        799 8 -     14244 ggcagagg
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           42197 8 -     54611 ggcagagg
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_878600                        1027 8 +      1165 ggcagagg
i Trachypithecus_germaini.k141_878600                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     2175 8 -     15592 ggcagagg
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                           832 8 +     14371 ggcagagg
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  50584 8 +     51589 ggcagagg
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       13765 8 +     14732 ggcagagg
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       4237 8 -     28054 ggcagagg
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44659037 8 -  44834318 ggcagagg
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       1340 8 +     13828 ggcagagg
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tupaia_chinensis.KB320831.1                             2791654 2 -   3938065 ------ga
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    3922 2 +     13056 ------ga
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Varecia_rubra.k141_432109                                  4126 8 -     20643 ggtagagg
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             23667 8 -     33872 ggtagagg
i Varecia_variegata.k141_775891                         C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     14076 8 -     20485 ggtagaag
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 I 7
e Eptesicus_fuscus.JH977687.1                             4702143 415 +   6522550 I
e Macroglossus_sobrinus.MacSob_scaffold_879                699974 431 +    802869 I
e Sorex_araneus.JH798170.1                               17748590 843 -  27805282 I
e Dinomys_branickii.DinBra_scaffold_1996                   156356 54 +    228994 I
e Erinaceus_europaeus.JH835290.1                         11530833 462 +  16010500 I
e Chaetophractus_vellerosus.ChaVel_scaffold_1070855          1230 0 -      1715 I
e Aplodontia_rufa.AprRuf_scaffold_156013                     2579 2 +      5067 I
e Suricata_suricatta.SurSur_flattened_line_20339            25319 430 +     62062 I
e Ziphius_cavirostris.ZipCav_flattened_line_127025           5301 442 -      8775 I
e Zalophus_californianus.ZalCal_flattened_line_4097        212018 448 -    227762 I
e Vulpes_lagopus.VulLag_flattened_line_2045                135489 449 -    281493 I
e Vicugna_pacos.KN269600.1                                1523037 433 -   2331223 I
e Ursus_maritimus.KK498671.1                              6512543 460 +  28682327 I
e Uropsilus_gracilis.UroGra_scaffold_4143_0                 24925 0 -     25548 I
e Tursiops_truncatus.MRVK01000923.1                      69311805 441 -  96451834 I
e Trichechus_manatus.JH594618.1                          16079679 1700 +  31416278 I
e Tragulus_javanicus.TraJav_scaffold_14717                   3584 419 +     90398 I
e Tonatia_saurophila.TonSau_scaffold_3334                  134241 421 -    259118 I
e Tolypeutes_matacus.TolMat_scaffold_269431                  1990 2406 +      6782 I
e Tapirus_terrestris.TapTer_scaffold_14939                  55756 434 +     99546 I
e Tapirus_indicus.TapInd_scaffold_176                      805095 435 +   1148477 I
e Tamandua_tetradactyla.TamTet_scaffold_26877               13106 433 +     45698 I
e Tadarida_brasiliensis.TadBra_scaffold_145589               4174 407 -      6213 I
e Sus_scrofa.CM000824.4                                 189270228 447 + 218635234 I
e Spilogale_gracilis.SpiGra_flattened_line_905             232751 445 -    276980 I
e Solenodon_paradoxus.SolPar_flattened_line_1012            16376 416 +    739146 I
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   29737 434 -    114521 I
e Saiga_tatarica.SaiTat_scaffold_82192                       5983 428 +     12214 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                17647 435 +    109198 I
e Rhinolophus_sinicus.LVEH01000179.1                      1786172 430 +   2252614 I
e Rangifer_tarandus.RanTarSib_scaffold_24239                14178 431 +     68503 I
e Puma_concolor.QAVW01000427.1                          131532079 431 - 161321710 I
e Pteropus_vampyrus.KN525959.1                             602305 437 -   3946241 I
e Pteropus_alecto.KB031157.1                             13244354 438 -  17261082 I
e Pteronura_brasiliensis.PteBra_flattened_line_1343        243991 454 -    344369 I
e Pteronotus_parnellii.KE867983.1                            2230 422 -     27784 I
e Procavia_capensis.ProCapCap_scaffold_15315                74302 1939 +     78963 I
e Platanista_gangetica.PlaMin_flattened_line_72990           3771 443 +     21690 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            95224 410 +    112873 I
e Phocoena_phocoena.PhoPho_flattened_line_11948            119703 443 -    122454 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113416 447 -    135482 I
e Pantholops_hodgsonii.KE114631.1                         1064538 417 -   1292953 I
e Panthera_tigris.KE721879.1                              5025497 431 -   6340057 I
e Panthera_pardus.KV860323.1                              3635849 432 +  18214204 I
e Panthera_onca.PanOnc_flattened_line_1615                  32116 431 +    295523 I
e Ovis_canadensis.OviCan_scaffold_6251                      76891 417 +    140051 I
e Ovis_aries.CM001582.2                                 134075677 417 - 275406953 I
e Otocyon_megalotis.JAEUCK010005121.1                      305421 444 -    505867 I
e Orycteropus_afer.OryAfe_flattened_line_13509              41471 1764 -     66828 I
e Orcinus_orca.KB316965.1                                 7223086 443 -   7562323 I
e Okapia_johnstoni.LVCL01S0017931.1                         35255 573 +     78940 I
e Odocoileus_virginianus.KZ101650.1                       1078100 432 +   1425656 I
e Odobenus_rosmarus.KB229369.1                             677288 443 -   3126709 I
e Nyctereutes_procyonoides.CAJHUB010000786.1                28082 449 +   3668941 I
e Noctilio_leporinus.NocLep_scaffold_12062                  47676 415 +     94413 I
e Neophocaena_asiaeorientalis.KZ688543.1                  3949402 443 -   4490290 I
e Neomonachus_schauinslandi.NINY01007774.1                4482632 454 -  14209539 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3432 432 -      8794 I
e Myotis_myotis.MyoMyo_scaffold_6123                         8554 416 +     66751 I
e Myotis_lucifugus.GL429887.1                             3463359 417 -   3747815 I
e Myotis_davidii.KB114863.1                               5017463 416 +   6462685 I
e Myotis_brandtii.KE161952.1                               965772 418 +   8389877 I
e Mustela_putorius.JH417978.1                             4421898 453 -  28371801 I
e Murina_feae.MurFea_scaffold_2254                          17451 414 -    100666 I
e Mungos_mungo.MunMun_flattened_line_8729                  142653 430 -    168139 I
e Moschus_moschiferus.MosMos_scaffold_146101                 2972 432 -      4346 I
e Mormoops_blainvillei.MorMeg_scaffold_2952                159560 424 +    265003 I
e Monodon_monoceros.MonMon_M_scaffold_5598                 144790 442 +    154973 I
e Mirounga_angustirostris.MirAng_flattened_line_8852         9033 661 -    104932 I
e Miniopterus_schreibersii.MinSch_scaffold_24116            32480 421 +     45743 I
e Miniopterus_natalensis.LDJU01000022.1                   8207809 420 +  10048721 I
e Micronycteris_hirsuta.MicHir_scaffold_37978               21050 428 -     32043 I
e Microgale_talazaci.MicTal_scaffold_34660                  29351 1133 -     48017 I
e Mellivora_capensis.MelCap_flattened_line_146202             327 452 -      1999 I
e Megaderma_lyra.MegLyr_scaffold_3562                       62628 576 -    234502 I
e Manis_pentadactyla.KN017078.1                             34538 441 +     58827 I
e Manis_javanica.JSZB01003966.1                            144466 438 +    252755 I
e Lycaon_pictus.CM007556.1                               11085089 449 +  39895028 I
e Loxodonta_africana.GL010040.1                          20589215 1702 -  62548349 I
e Lipotes_vexillifer.KE558548.1                            134353 444 +   3060487 I
e Leptonychotes_weddellii.KB714749.1                      3083728 458 -   3498232 I
e Lasiurus_borealis.LasBor_scaffold_5102                   111937 417 -    115756 I
e Kogia_breviceps.KogBre_flattened_line_35920               22021 443 +     37189 I
e Inia_geoffrensis.IniGeo_flattened_line_66725               7195 437 +     17520 I
e Hyaena_hyaena.HyaHya_flattened_line_20729                 14013 474 -     67322 I
e Hipposideros_galeritus.HipGal_scaffold_104691              5946 409 -      9143 I
e Hipposideros_armiger.JXIK01001085.1                      276788 408 -    477199 I
e Hippopotamus_amphibius.HipAmp_scaffold_1308              145449 430 +    277961 I
e Heterohyrax_brucei.HetBruBak_scaffold_25354               54438 1939 +     73687 I
e Hemitragus_hylocrius.HemHyl_scaffold_16669                25884 416 -     91191 I
e Helogale_parvula.HelPar_flattened_line_22962              14960 432 +     53719 I
e Giraffa_tippelskirchi.LVKQ01S012154.1                    179385 717 -    189561 I
e Felis_nigripes.FelNig_flattened_line_8080                 18925 427 +     52776 I
e Felis_catus_fca126.CM031420.1                         129277790 427 - 158578461 I
e Eubalaena_japonica.EubJap_flattened_line_7756             59838 466 +     89355 I
e Eschrichtius_robustus.EscRob_flattened_line_685          313408 442 +    330699 I
e Equus_przewalskii.ATBW01073585.1                          11036 704 +     92910 I
e Equus_caballus.CM000402.2                              13349546 704 +  41866177 I
e Equus_asinus.JREZ01000062.1                             5851044 703 -   7175178 I
e Enhydra_lutris.KZ291749.1                              85869516 453 +  99434291 I
e Elephantulus_edwardii.JH947210.1                        7804622 10712 +  15467074 I
e Elaphurus_davidianus.JRFZ01086400.1                     1489870 432 +   1727528 I
e Eidolon_helvum.KE772537.1                                 10556 435 +     24177 I
e Echinops_telfairi.JH980316.1                           22994071 0 -  44670279 C
e Diceros_bicornis.DicBicMic_scaffold_9545                    953 1024 +    151128 I
e Dicerorhinus_sumatrensis.PEKH010003161.1                 320309 1016 +    993696 I
e Desmodus_rotundus.KZ672188.1                           18697183 419 -  18957592 I
e Delphinapterus_leucas.KZ290064.1                       80035206 438 -  96802777 I
e Dasypus_novemcinctus.JH568778.1                          180040 2424 -   6883506 I
e Cryptoprocta_ferox.CryFer_flattened_line_19014            49751 433 -     70449 I
e Crocidura_indochinensis.CroInd_scaffold_38409             18067 408 -     19186 I
e Craseonycteris_thonglongyai.CraTho_scaffold_22679         37588 826 -     40477 I
e Condylura_cristata.JH655880.1                          60611131 297 +  78930452 I
e Choloepus_hoffmanni.KN194586.1                           760141 439 +    964067 I
e Choloepus_didactylus.ChoDid_scaffold_36182                14830 439 -     21363 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_160623         1406 1024 -      9338 I
e Catagonus_wagneri.CatWag_scaffold_1305                   157166 412 -    276539 I
e Carollia_perspicillata.CarPer_scaffold_4436               57873 420 +     67245 I
e Capra_hircus.CM004562.1                               135704839 417 - 157403528 I
e Capra_aegagrus.CM003214.1                              21323612 417 + 157394656 I
e Canis_lupus_orion.HG994411.1                           16452657 449 -  44759192 I
e Canis_lupus_familiaris.chr31                           11085633 449 +  39895921 I
e Canis_lupus_dingo.QKWQ01001993.1                       11263104 449 -  35597290 I
e Canis_lupus_VD.CanFam_VD_scaffold_16982                   11461 449 +     87036 I
e CanFam4.chr31                                          11516443 449 +  39901454 I
e Camelus_ferus.KB016973.1                                2971365 436 +   6889770 I
e Camelus_dromedarius.KN271192.1                           395631 437 -  15254737 I
e Camelus_bactrianus.KN276303.1                           3217927 436 -   8989139 I
e Bubalus_bubalis.KI419065.1                              1229342 431 -   1914593 I
e Bos_taurus.CM000177.6                                 136293586 432 - 158972876 I
e Bos_mutus.JH883513.1                                     570227 432 -    998990 I
e Bos_indicus.CM003021.1                                138137853 432 - 161108492 I
e Bison_bison.KN264915.1                                  6557614 432 +   6870073 I
e Beatragus_hunteri.BeaHun_scaffold_21644                   41603 412 -     72089 I
e Balaenoptera_bonaerensis.DF502048.1                        3753 444 -     13118 I
e Balaenoptera_acutorostrata.KI537095.1                  26378522 443 +  51448160 I
e Artibeus_jamaicensis.ArtJam_scaffold_41619                 7075 421 -     29036 I
e Antilocapra_americana.AntAmePen_scaffold_42841            29107 427 +     33004 I
e Anoura_caudifer.AnoCau_scaffold_422                      388679 416 -    631301 I
e Ammotragus_lervia.NIVO01013474.1                        3518508 445 +   4113121 I
e Ailurus_fulgens.LNAC01000003.1                          7091784 657 -  16596857 I
e Ailuropoda_melanoleuca.LNAT01000321.1                  10655057 459 +  23371972 I
e Acinonyx_jubatus.LLWD01000356.1                         2031739 430 +   3721120 I
e Hylobates_pileatus_a.tarseq_592                             33311 5 -     60944 I
e Xerus_inauris.XerIna_scaffold_7898                       125752 2 -    134049 I
e Spermophilus_dauricus.KZ294190.1                        2238652 2 +   2842873 I
e Marmota_marmota.CZRN01000005.1                         36872571 2 +  64221397 I
e Ictidomys_tridecemlineatus.JH393315.1                   7124732 2 +  13083262 I
e Hapalemur_meridionalis.k141_186231                        27750 0 -     42470 C
e Hapalemur_alaotrensis.k141_1280836                          695 0 +     10286 C
e Nomascus_siki_b.tarseq_80                             24175 0 -  18771707 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               10796 40 +    209709 ga----aaGGTC-----T-CCAAGTCCTACAGT-TCCAAA-----AGAA-AA--T-AG-----------C----------------T
s Acinonyx_jubatus.LLWD01000356.1                         2032169 14 +   3721120 ------------------------------------taaa-----G-TA-GA--T-AA-----------C----------------T
i Acinonyx_jubatus.LLWD01000356.1                       I 430 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    111150 34 -    189883 -A----AAGTGT-----T-CCCTC-CCTACAGT-TTGAAA-----TGAA-CA--C--------------------------------
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 1 I 5
s Ailuropoda_melanoleuca.LNAT01000321.1                  10655516 14 +  23371972 ------------------------------------CAAA-----G-TA-GA--T-AA-----------A----------------T
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 459 C 0
s Ailurus_fulgens.LNAC01000003.1                          7092441 14 -  16596857 ------------------------------------CAAA-----G-TA-GA--T-AA-----------T----------------T
i Ailurus_fulgens.LNAC01000003.1                        I 657 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   11830 28 -     22067 --------------------TCCTTCCTCCAGT-TTCAAA-----AGAT-GA--T-GG-----------------------------
i Allactaga_bullata.AllBul_scaffold_70162               I 7 I 1
s Allenopithecus_nigroviridis.k141_3103728                   1398 39 +      1665 ga----aagttt-----t-cccA-TCCTACCAT-TCCGAA-----AGAG-AA--T-AG-----------C----------------T
i Allenopithecus_nigroviridis.k141_3103728              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                          874 39 -     29318 ga----aagttt-----t-cccA-TCCTACCAT-TCCGAA-----AGAG-AA--T-AG-----------C----------------T
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_21674                           1091 39 -      1421 ga----aagttt-----t-cccA-TCCTACCAT-TCCGAA-----AGAG-AA--T-AG-----------C----------------T
i Allochrocebus_preussi.k141_21674                      C 0 C 0
s Allochrocebus_solatus.k141_371672                           768 39 -     80423 ga----aagttt-----t-cccA-TCCTACCAT-TCCGAA-----AGAG-AA--T-AG-----------C----------------T
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             9060 40 -     18050 ga----aagttt-----t-cccAGTCCTACAGT-TCCAAA-----AGAA-GC--T-GG-----------C----------------T
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                 10151 39 -     11521 GA----AAGTTT-----T-CC-AGTCCTACAGT-TCCAAA-----AGAA-GC--T-GG-----------C----------------T
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              9737 40 -     21359 ga----aagttt-----t-cccAGTCCTACAGT-TCCAAA-----AGAA-GC--T-GG-----------C----------------T
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_298055                                 1033 40 +      1823 GA----AAGTTT-----T-CCCAGTCCTACAGT-TCCAAA-----AGAA-GC--T-GG-----------C----------------T
i Alouatta_juara.k141_298055                            I 8 C 0
s Alouatta_macconnelli.k141_1331706                          9033 40 -     10438 ga----aagttt-----t-cccAGTCCTACAGT-TCCAAA-----AGAA-GC--T-GG-----------C----------------T
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            5689 40 +      7047 ga----aagttt-----t-cccagtcctacaGT-TCCAAA-----AGAA-GC--T-GG-----------C----------------T
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             8969 40 +     10410 ga----aagttt-----t-cccagtcctacaGT-TCCAAA-----AGAA-GC--T-GG-----------C----------------T
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            2779 40 -      4927 ga----aagttt-----t-cccAGTCCTACAGT-TCCAAA-----AGAA-GC--T-GG-----------C----------------T
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             5708 40 +      6429 ga----aagttt-----t-cccAGTCCTACAGT-TCCAAA-----AGAA-GC--T-GG-----------C----------------T
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3518953  5 +   4113121 ------------------------------------CGAA-----A-----------------------------------------
i Ammotragus_lervia.NIVO01013474.1                      I 445 I 1
s Anoura_caudifer.AnoCau_scaffold_422                      389095 11 -    631301 ---------------------------------------T-----G-TA-GA--T-AA-----------C----------------T
i Anoura_caudifer.AnoCau_scaffold_422                   I 416 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            29534  5 +     33004 ------------------------------------CGAA-----A-----------------------------------------
i Antilocapra_americana.AntAmePen_scaffold_42841        I 427 I 1
s Aotus_azarae.k141_3170768                                 61417 40 +     78111 ga----aagttt-----t-cccAGTCCTACAGT-TCCAAA-----AGAA-AC--T-GG-----------C----------------T
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            4358 40 +     22701 ga----aagttt-----t-cccAGTCCTACAGT-TCCAAA-----AGAA-AC--T-GG-----------C----------------T
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5748315 40 +   9889416 GA----AAGTTT-----T-CCCAGTCCTACAGT-TCCAAA-----AGAA-AC--T-GG-----------C----------------T
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             4900 40 -    104377 ga----aagttt-----t-cccAGGCCTACAGT-TCCAAA-----AGAA-AC--T-GG-----------C----------------T
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               4906 40 +     23246 ga----aagttt-----t-cccAGTCCTACAGT-TCCAAA-----AGAA-AC--T-GG-----------C----------------T
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     2581 33 +      5067 -----------T-----T-GAATTCCTTATAGC-TCCAAA-----AGAA-AA--C-AG-----------C----------------T
i Aplodontia_rufa.AprRuf_scaffold_156013                I 2 C 0
s Arctocebus_calabarensis.k141_1161114                      16706 33 +     17483 GG----CAAACt-----t-ccctcccctccact-tctaaa-----agac--------------------------------------
i Arctocebus_calabarensis.k141_1161114                  C 0 I 4
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 7496 11 -     29036 ---------------------------------------T-----G-TA-GA--T-AA-----------C----------------T
i Artibeus_jamaicensis.ArtJam_scaffold_41619            I 421 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9538165 40 +  39197703 ga----aagttt-----t-cccAGTCCTACAGT-TCCAAA-----AGAA-GC--T-GG-----------C----------------T
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             59436 40 +     85812 GA----AAGTTT-----T-CCCAGTCCTACAGT-TCCAAA-----AGAA-GC--T-GG-----------C----------------T
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                10448 40 +     89302 ga----aagttt-----t-cccAGTCCTACAGT-TCCAAA-----AGAA-AC--T-GG-----------C----------------T
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             14953 40 -     58268 ga----aagttt-----t-cccAGTCCTACAGT-TCCAAA-----AGAA-GC--T-GG-----------C----------------T
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             62944 40 +    119057 ga----aagttt-----t-cccAGTCCTACAGT-TCCAAA-----AGAA-GC--T-GG-----------C----------------T
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               4913 40 -     25888 ga----aagttt-----t-cccAGTCCTACAGT-TCCAAA-----AGAA-GC--T-GG-----------C----------------T
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 5547 40 -     16375 ga----cagtct-----t-cccttcTTTATAGT-TCCAGA-----AGAA-GA--T-TG-----------T----------------T
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              1867 40 +      2719 ga----cagtct-----t-cccttcTTTATAGT-TCCAGA-----AGAA-GA--T-TG-----------C----------------T
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26378965  5 +  51448160 ------------------------------------CAAA-----A-----------------------------------------
i Balaenoptera_acutorostrata.KI537095.1                 I 443 I 1
s Balaenoptera_bonaerensis.DF502048.1                        4197  5 -     13118 ------------------------------------CAAA-----A-----------------------------------------
i Balaenoptera_bonaerensis.DF502048.1                   I 444 I 1
s Beatragus_hunteri.BeaHun_scaffold_21644                   42015  5 -     72089 ------------------------------------CGAA-----A-----------------------------------------
i Beatragus_hunteri.BeaHun_scaffold_21644               I 412 I 1
s Bison_bison.KN264915.1                                  6558046  5 +   6870073 ------------------------------------CGAA-----A-----------------------------------------
i Bison_bison.KN264915.1                                I 432 I 1
s Bos_indicus.CM003021.1                                138138285  5 - 161108492 ------------------------------------CGAA-----A-----------------------------------------
i Bos_indicus.CM003021.1                                I 432 I 1
s Bos_mutus.JH883513.1                                     570659  5 -    998990 ------------------------------------CGAA-----A-----------------------------------------
i Bos_mutus.JH883513.1                                  I 432 I 1
s Bos_taurus.CM000177.6                                 136294018  5 - 158972876 ------------------------------------CGAA-----A-----------------------------------------
i Bos_taurus.CM000177.6                                 I 432 I 1
s Bubalus_bubalis.KI419065.1                              1229773  5 -   1914593 ------------------------------------CGAA-----A-----------------------------------------
i Bubalus_bubalis.KI419065.1                            I 431 I 1
s Cacajao_ayresi.k141_724503                               112806 40 -    171031 ga----aagttt-----t-cccAGTCCTACAGT-TCCAAA-----AGAA-GC--T-GG-----------C----------------T
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 11834 40 +    125063 ga----aagttt-----t-cccAGTCCTACAGT-TCCAAA-----AGAA-GC--T-GG-----------C----------------T
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                13879 40 -    216513 ga----aagttt-----t-cccAGTCCTACAGT-TCCAAA-----AGAA-GC--T-GG-----------C----------------T
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        6419 40 -    134917 ga----aagttt-----t-cccAGTCCTACAGT-TCCAAA-----AGAA-GC--T-GG-----------C----------------T
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3218363 14 -   8989139 ------------------------------------CAAA-----G-CA-GA--T-CA-----------C----------------T
i Camelus_bactrianus.KN276303.1                         I 436 C 0
s Camelus_dromedarius.KN271192.1                           396068 14 -  15254737 ------------------------------------CAAA-----G-CA-GA--T-CA-----------C----------------T
i Camelus_dromedarius.KN271192.1                        I 437 C 0
s Camelus_ferus.KB016973.1                                2971801 14 +   6889770 ------------------------------------CAAA-----G-CA-GA--T-CA-----------C----------------T
i Camelus_ferus.KB016973.1                              I 436 C 0
s CanFam4.chr31                                          11516892 14 +  39901454 ------------------------------------CAAA-----G-TA-GA--T-AA-----------C----------------T
i CanFam4.chr31                                         I 449 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   11910 14 +     87036 ------------------------------------CAAA-----G-TA-GA--T-AA-----------C----------------T
i Canis_lupus_VD.CanFam_VD_scaffold_16982               I 449 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11263553 14 -  35597290 ------------------------------------CAAA-----G-TA-GA--T-AA-----------C----------------T
i Canis_lupus_dingo.QKWQ01001993.1                      I 449 C 0
s Canis_lupus_familiaris.chr31                           11086082 14 +  39895921 ------------------------------------CAAA-----G-TA-GA--T-AA-----------C----------------T
i Canis_lupus_familiaris.chr31                          I 449 C 0
s Canis_lupus_orion.HG994411.1                           16453106 14 -  44759192 ------------------------------------CAAA-----G-TA-GA--T-AA-----------C----------------T
i Canis_lupus_orion.HG994411.1                          I 449 C 0
s Capra_aegagrus.CM003214.1                              21324029  5 + 157394656 ------------------------------------CGAA-----A-----------------------------------------
i Capra_aegagrus.CM003214.1                             I 417 I 1
s Capra_hircus.CM004562.1                               135705256  5 - 157403528 ------------------------------------CGAA-----A-----------------------------------------
i Capra_hircus.CM004562.1                               I 417 I 1
s Capromys_pilorides.CapPil_scaffold_979108                   813 56 -      1248 aa----aagtct-----t-cactcctttacaAT-TCCAAATAATTAAAA-GA--T-AAATATATAAATTA----------------T
i Capromys_pilorides.CapPil_scaffold_979108             C 0 C 0
s Carlito_syrichta.NW_007248099.1                          307854 40 +    345090 GA----AAGTCT-----T-TCCTCCCCGGCAGT-TCCAAA-----AGAA-GA--T-AG-----------T----------------T
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               58293 11 +     67245 ---------------------------------------T-----G-TA-GA--T-AA-----------C----------------T
i Carollia_perspicillata.CarPer_scaffold_4436           I 420 C 0
s Castor_canadensis.CasCan_scaffold_47037                   29521 37 +     33760 ------aagtgt-----t-gtctc-ccTCAAGT-TTGAAA-----AGAA-GA--T-TG-----------C----------------T
i Castor_canadensis.CasCan_scaffold_47037               I 2 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   157578 14 -    276539 ------------------------------------CAAA-----A-TA-GA--T-AG-----------C----------------C
i Catagonus_wagneri.CatWag_scaffold_1305                I 412 C 0
s Cavia_aperea.AVPZ01000278.1                            15785462 40 -  24422027 NN----NNNNNN-----N-NNNNNNNNNNNNNN-NNNNNN-----NNNN-NN--N-NN-----------N----------------N
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15797396 40 -  24440124 ga----aagtct-----t-cactcccctacaGG-CCCAAA-----AGAA-GA--T-AG-----------C----------------T
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       175587 40 +    436027 ga----aagtct-----t-cactcccctacaGG-CCCAAA-----AGAA-GA--T-AG-----------C----------------T
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18889649 40 -  29618158 ga----aagttt-----t-cccagtcctacaGT-TCGAAA-----AGAA-GC--T-GG-----------C----------------T
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 7193 40 -     26817 ga----aagttt-----t-cccagtcctacaGT-TCGAAA-----AGAA-GC--T-GG-----------C----------------T
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                11433 40 +     25043 ga----aagttt-----t-cccagtcctacaGT-TCGAAA-----AGAA-GC--T-GG-----------C----------------T
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         6887 40 +     21754 ga----aagtct-----t-tcctccccGGCAGT-TCCAAA-----AGAA-GA--T-AG-----------T----------------T
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4362678 14 +   7569818 ------------------------------------CAAA-----G-TA-GA--T-AA-----------C----------------T
i Ceratotherium_simum.JH767818.1                        I 1027 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         2430 14 -      9338 ------------------------------------CAAA-----G-TA-GA--T-AA-----------C----------------T
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    I 1024 C 0
s Cercocebus_atys.KQ010443.1                              6554090 39 +   6739814 ga----aagTTT-----T-CCCA-TCCTACCAT-TCCGAA-----AGAG-AA--T-AG-----------C----------------T
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      25567 39 +     60454 ga----aagttt-----t-cccA-TCCTACCAT-TCCGAA-----AGAG-AA--T-AG-----------C----------------T
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                           772 39 -     21101 ga----aagttt-----t-cccA-TCCTACCAT-TCCGAA-----AGAG-AA--T-AG-----------C----------------T
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         58082 39 -    107033 ga----aagttt-----t-cccA-TCCTACCAT-TCCGAA-----AGAG-AA--T-AG-----------C----------------T
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                         974 35 -     17608 ga----aagttt-----t-cccA-TCCTACCAT-TCCGAA-----AGAG-AA--T--------------------------------
i Cercopithecus_ascanius.k141_4123525                   C 0 I 4
s Cercopithecus_cephus.k141_598190                          28472 35 +     30494 ga----aagttt-----t-cccA-TCCTACCAT-TCCGAA-----AGAG-AA--T--------------------------------
i Cercopithecus_cephus.k141_598190                      C 0 I 1
s Cercopithecus_diana.k141_2980617                          57315 39 -     59240 ga----aagttt-----t-cccA-TCCTACCAT-TCCAAA-----AGAG-AA--T-AG-----------C----------------T
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          1016 39 +     16677 ga----aagttt-----t-cccA-TCCTACCAT-TCTGAA-----AGAG-AA--T-AG-----------C----------------T
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           23174 39 +     35983 ga----aagttt-----t-cccA-TCCTACCAT-TCCGAA-----AGAG-AA--T-AG-----------C----------------T
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11989705 35 +  12117833 ga----aagttt-----t-cccA-TCCTACCAT-TCCGAA-----AGAG-AA--T--------------------------------
i Cercopithecus_albogularis.ctg51                             C 0 I 1
s Cercopithecus_mona.ctg12                               46476460 39 +  46592721 ga----aagttt-----t-cccA-TCCTACCAT-TCCGAA-----AGAG-AA--T-AG-----------C----------------T
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      40011 39 -     45581 ga----aagttt-----t-cccA-TCCTACCAT-TCCGAA-----AGAG-AA--T-AG-----------C----------------T
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       1020 35 +     35577 ga----aagttt-----t-cccA-TCCTACCAT-TCCGAA-----AGAG-AA--T--------------------------------
i Cercopithecus_nictitans.k141_1129315                  C 0 I 1
s Cercopithecus_petaurista.k141_64532                         793 35 -     25661 ga----aagttt-----t-cccA-TCCTACCAT-TCCGAA-----AGAG-AA--T--------------------------------
i Cercopithecus_petaurista.k141_64532                   C 0 I 4
s Cercopithecus_pogonias.k141_3109732                         771 39 -     17744 ga----aagttt-----t-cccA-TCCTACCAT-TCCAAA-----AGAG-AA--T-AG-----------C----------------T
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        20380 39 +     37128 ga----aagttt-----t-cccA-TCCTACCAT-TCCAAA-----AGAG-AA--T-AG-----------C----------------T
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           1627  8 -      6963 ------------------------------------AGAA-----AAAA--------------------------------------
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 I 1
s Cheirogaleus_major.k141_1157592                           57841 40 -     68416 ga----cagttt-----t-ccctcctctataGT-TCCAAA-----AGAA-GA--T-TG-----------C----------------T
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            6884 40 +     13308 gg----tagttt-----t-ccctcctctataGT-TCCAAA-----AGAA-GA--T-TG-----------C----------------A
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             4449 40 -     18223 ga----aagttt-----t-ccctgtcctacaGT-TCTAAA-----AGAA-GC--T-AA-----------C----------------T
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             21472 40 +     25473 ga----aagttt-----t-ccctgtcctacaGT-TCTAAA-----AGAA-GC--T-AA-----------C----------------T
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           40507 40 +     57117 ga----aagttt-----t-ccctgtcctacaGT-TCTAAA-----AGAA-GC--T-AA-----------C----------------T
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          45186 40 +     54541 ga----aagttt-----t-ccctgtcctacaGT-TCTAAA-----AGAA-GC--T-AA-----------C----------------T
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15960607 40 +  43084221 ca----aagttc-----t-caatcttccataGG-TCTAAA-----AGAA-GA--T-AG-----------C----------------t
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         70008 40 +    196370 ga----aagttt-----t-cccAGTCCTACAGT-TCCAAA-----AGAA-GC--T-GG-----------C----------------T
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          14188 40 +     40510 ga----aagttt-----t-cccAGTCCTACAGT-TCCAAA-----AGAA-GC--T-GG-----------T----------------T
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15137934 39 -  15256731 ga----aagttt-----t-cccA-TCCTACCAT-TCCGAA-----AGAG-AA--G-AG-----------C----------------T
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      32981 39 -     53260 ga----aagttt-----t-cccA-TCCTACCAT-TCCGAA-----AGAG-AA--G-AG-----------C----------------T
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101143544 39 + 101219884 CA----AAGTTT-----T-CCCA-TCCTACCAT-TCCGAA-----AGAG-AA--T-AG-----------C----------------T
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                15269 31 -     21363 ------------------------------------CGAG-----AGCA-GA--T-AG-----------CCTGGGATAGGAAGTGCC
i Choloepus_didactylus.ChoDid_scaffold_36182            I 439 C 0
s Choloepus_hoffmanni.KN194586.1                           760580 31 +    964067 ------------------------------------CGAG-----AGCA-GA--T-AG-----------CCTGGGATAGGAAGTGCC
i Choloepus_hoffmanni.KN194586.1                        I 439 C 0
s Colobus_angolensis.KN985967.1                          10885309 40 +  10971483 GA----AATTTT-----T-CCCACTCCTACCAT-TCCGAA-----AGAG-AA--T-AG-----------C----------------T
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147663473 40 + 156195979 ga----aatttt-----t-cccactcctacCAT-TCCGAA-----AGAG-AA--T-AG-----------C----------------T
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            15457 40 +     23629 ga----aatttt-----t-cccactcctacCAT-TCCGAA-----AGAG-AA--T-AG-----------C----------------T
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60611428 14 +  78930452 ------------------------------------caaA-----A-TA-GA--T-AA-----------C----------------T
i Condylura_cristata.JH655880.1                         I 297 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         38414 14 -     40477 ------------------------------------CGAT-----G-TA-GA--T-AA-----------C----------------C
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     I 826 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 277116 38 -    399297 -A----AAGAAT-----T-CCCTC-CCAACAGT-TAAAAG-----TGTA-AA--A-AA-----------C----------------T
i Cricetomys_gambianus.CriGam_scaffold_949              I 1 C 0
s Cricetulus_griseus.LT883672.1                          53027802 34 +  72327488 -A----ACATAT-----T-TCCTC-CCTACAGT-TCCAAA-----GGAA-AG--C--------------------------------
i Cricetulus_griseus.LT883672.1                         I 1 I 5
s Crocidura_indochinensis.CroInd_scaffold_38409             18475 12 -     19186 ------------------------------------CAAA-----G-TA-AA--T-AG-----------------------------
i Crocidura_indochinensis.CroInd_scaffold_38409         I 408 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            50184 14 -     70449 ------------------------------------CAAA-----G-TA-GA--T-AA-----------C----------------T
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 433 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  207019 40 -    956709 ga----cagtct-----t-cccactcctacaGT-TTCAAC-----AGAA-GA--T-GA-----------C----------------C
i Ctenodactylus_gundi.CteGun_scaffold_447               I 2 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 29575 56 -     67205 ga----cagtct-----t-CACAGCTTCATACA-TCCAAATAATTAAAA-GG--T-AAATATGTAGACTA----------------T
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                16615 40 +     26546 ga----aagtct-----t-cactcctctgcaGG-CCCAAA-----AGAA-GA--A-AG-----------C----------------T
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             57707 40 -    236241 ga----aagtct-----t-cactcctctaTTGG-CCCAGA-----GGGA-GA--T-AG-----------C----------------T
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          182464  8 -   6883506 ------------------------------------agaa-----aaaa--------------------------------------
i Dasypus_novemcinctus.JH568778.1                       I 2424 C 0
s Daubentonia_madagascariensis.ctg11                     16843694 40 +  31942871 ga----cagtct-----t-ccctcccctataGT-TCCAAG-----AGAA-GA--G-AG-----------C----------------T
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80035644  5 -  96802777 ------------------------------------CAAA-----A-----------------------------------------
i Delphinapterus_leucas.KZ290064.1                      I 438 I 1
s Desmodus_rotundus.KZ672188.1                           18697602 11 -  18957592 ---------------------------------------t-----g-tA-GA--T-AA-----------C----------------T
i Desmodus_rotundus.KZ672188.1                          I 419 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 321325 14 +    993696 ------------------------------------CAAA-----G-TA-GA--T-AA-----------C----------------T
i Dicerorhinus_sumatrensis.PEKH010003161.1              I 1016 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   1977 14 +    151128 ------------------------------------CAAA-----G-TA-GA--T-AA-----------C----------------T
i Diceros_bicornis.DicBicMic_scaffold_9545              I 1024 C 0
s Dipodomys_ordii.KN672545.1                              3655031 11 +   4240102 -----------------------------C--T-TAGAAA-----AGG---------------------------------------
i Dipodomys_ordii.KN672545.1                            C 0 I 3
s Dipodomys_stephensi.DipSte_scaffold_44365                 26667 11 +     28912 -----------------------------C--T-TAGAAA-----AGG---------------------------------------
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 I 3
s Dolichotis_patagonum.DolPat_scaffold_14102                34953 40 -     73477 ga----aagtct-----t-cactcctctacaGG-CCCAAA-----AGAA-GA--T-AG-----------C----------------T
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22994071 16 -  44670279 ------------------------------------CCAA-----AGTA-AAT-T-AG-----------T----------------T
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 10991 14 +     24177 ------------------------------------CAAA-----G-TA-GA--T-AA-----------T----------------T
i Eidolon_helvum.KE772537.1                             I 435 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1490302  5 +   1727528 ------------------------------------CGAA-----A-----------------------------------------
i Elaphurus_davidianus.JRFZ01086400.1                   I 432 I 1
s Ellobius_lutescens.LOEQ01003611.1                        238360 34 -    369425 -A----AAATAT-----T-CCCTC-CCAACAGT-TCCAAA-----AGAA-AA--C--------------------------------
i Ellobius_lutescens.LOEQ01003611.1                     I 1 I 5
s Ellobius_talpinus.LOJH01090055.1                           5470 34 -      7838 -a----aaatat-----t-ccctc-ccAACAgt-tccaaa-----agaa-aa--c--------------------------------
i Ellobius_talpinus.LOJH01090055.1                      I 1 I 5
s Enhydra_lutris.KZ291749.1                              85869969 14 +  99434291 ------------------------------------CAAA-----G-TA-GA--T-AA-----------C----------------T
i Enhydra_lutris.KZ291749.1                             I 453 C 0
s Eptesicus_fuscus.JH977687.1                             4702558 11 +   6522550 ---------------------------------------a-----a-ta-ga--t-aa-----------c----------------t
i Eptesicus_fuscus.JH977687.1                           I 415 I 441
s Equus_asinus.JREZ01000062.1                             5851747 14 -   7175178 ------------------------------------CAAA-----G-TA-GA--T-AA-----------A----------------T
i Equus_asinus.JREZ01000062.1                           I 703 C 0
s Equus_caballus.CM000402.2                              13350250 14 +  41866177 ------------------------------------CAAA-----G-TA-GA--T-AA-----------A----------------T
i Equus_caballus.CM000402.2                             I 704 C 0
s Equus_przewalskii.ATBW01073585.1                          11740 14 +     92910 ------------------------------------CAAA-----G-TA-GA--T-AA-----------A----------------T
i Equus_przewalskii.ATBW01073585.1                      I 704 C 0
s Erinaceus_europaeus.JH835290.1                         11531295 15 +  16010500 ------------------------------------CAAA-----G-TC-GA--TTAA-----------T----------------T
i Erinaceus_europaeus.JH835290.1                        I 462 C 0
s Erythrocebus_patas.Contig8                             48770114 39 -  48907691 ga----aagttt-----t-cccA-TCCTACCAT-TCCGAA-----AGAG-AA--T-AG-----------C----------------T
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          313850  5 +    330699 ------------------------------------CAAA-----A-----------------------------------------
i Eschrichtius_robustus.EscRob_flattened_line_685       I 442 I 1
s Eubalaena_japonica.EubJap_flattened_line_7756             60304  5 +     89355 ------------------------------------CAAA-----A-----------------------------------------
i Eubalaena_japonica.EubJap_flattened_line_7756         I 466 I 1
s Eulemur_albifrons.k141_715837                              3885 40 +     13586 ga----cagcct-----t-ccctcctctataGT-TCCAAA-----AGAA-GA--T-TG-----------C----------------T
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               3822 40 -      6809 ga----cagcct-----t-ccctcctctataGT-TCCAAA-----AGAA-GA--T-TG-----------C----------------T
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            10298 38 +     36558 ga----cagcct-----t-ccctcctc--taGT-TCCAAA-----AGAA-GA--T-TG-----------C----------------T
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             6614 40 +     60246 ga----cagcct-----t-ctctcctctataGT-TCCAAA-----AGAA-GA--T-TG-----------C----------------T
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                10093 40 +    109717 ga----cagcct-----t-ccctcctctataGT-TCCAAA-----AGAA-GA--T-TG-----------C----------------T
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               14476 40 +     16540 ga----cagcct-----t-ctctcctctataGT-TCCAAA-----AGAA-GA--T-TG-----------C----------------T
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                14749 40 +     27497 ga----cagcct-----t-ccctcctctataGT-TCCAAA-----AGAA-GA--T-TG-----------C----------------T
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           17207 39 +     26808 ga----cagcct-----t-ccctcctctataGT-TCCAAA------GAA-GA--T-TG-----------C----------------T
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                31941 40 +     46535 ga----cagcct-----t-ccctcctctataGT-TCCAAA-----AGAA-GA--T-TG-----------C----------------T
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              14663 40 -     29447 ga----cagcct-----t-ccctcctctataGT-TCCAAA-----AGAA-GA--T-TG-----------C----------------T
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129891145 14 - 159252932 ------------------------------------taaa-----g-TA-GA--T-AA-----------C----------------T
i Felis_catus.CM001386.2                                I 430 C 0
s Felis_catus_fca126.CM031420.1                         129278217 14 - 158578461 ------------------------------------taaa-----g-TA-GA--T-AA-----------C----------------T
i Felis_catus_fca126.CM031420.1                         I 427 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 19352 14 +     52776 ------------------------------------TAAA-----G-TA-GA--T-AA-----------C----------------T
i Felis_nigripes.FelNig_flattened_line_8080             I 427 C 0
s Fukomys_damarensis.KN123630.1                          13891557 40 -  19261668 ga----aagtct-----t-ccctctcttacaGG-TCCAAA-----AGAA-GA--C-ag-----------c----------------t
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     209796 33 -    847004 GG----CCAACT-----T-CCTTCCCCTTCACT-TCCAAA-----AGAT--------------------------------------
i Galago_moholi.ctg555                                  C 0 I 4
s Galago_senegalensis.k141_964197                           12175 33 -     43889 GG----CCAACT-----T-CCTTCCCCTTCACT-TCCAAA-----AGAT--------------------------------------
i Galago_senegalensis.k141_964197                       C 0 I 4
s Galagoides_demidoff.k141_1769638                           9244 33 +     27357 TG----CCAACT-----T-CCTCCCCCTTCACT-TGCAAA-----AGAT--------------------------------------
i Galagoides_demidoff.k141_1769638                      C 0 I 4
s Galeopterus_variegatus.GalVar_scaffold_354               155135 40 +    324696 aa----aagtct-----t-ccctcccctccaGT-TCCAAA-----AGAA-GA--T-AG-----------C----------------T
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    180102  5 -    189561 ------------------------------------CAAA-----A-----------------------------------------
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 717 I 1
s Glis_glis.GliGli_scaffold_79770                           11725 40 -     18683 ga----aagtct-----t-cactttcttacaGT-TGCATA-----AGAA-AA--T-AG-----------C----------------T
i Glis_glis.GliGli_scaffold_79770                       I 219 C 0
s Gorilla_beringei.k141_111300                               4181 40 -     14630 ga----aagttc-----t-cccagtcctacaGT-TCCAAA-----AGAA-AA--T-AG-----------C----------------T
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119651280 40 - 195582420 ga----aagttc-----t-cccagtcctacaGT-TCCAAA-----AGAA-AA--T-AG-----------C----------------T
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   76455 40 +    118900 ga----aagtct-----t-cactttcttacaAT-TGCATA-----AGAA-AA--T-AG-----------C----------------T
i Graphiurus_murinus.GraMur_scaffold_4493               I 210 C 0
s Hapalemur_alaotrensis.k141_1280836                          695 31 +     10286 -------------------CCCTCCTCCATAGT-TCCAAA-----AGAA-GA--T-TG-----------C----------------T
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_1254239                            8862 40 +      9690 ga----cagcct-----t-ccctcctccATAGT-TCCAAA-----AGAA-GA--T-TG-----------C----------------T
i Hapalemur_gilberti.k141_1254239                       C 0 C 0
s Hapalemur_griseus.k141_1387522                             4491 40 +     56096 ga----cagcct-----t-ccctcctccATAGT-TCCAAA-----AGAA-GA--T-TG-----------C----------------T
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        27750 31 -     42470 -------------------CCCTCCTCCATAGT-TCCAAA-----AGAA-GA--T-TG-----------C----------------T
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        44365 40 -     54384 ga----cagcct-----t-ccctcctccATAGT-TCCAAA-----AGAA-GA--T-TG-----------C----------------T
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              15392 14 +     53719 ------------------------------------CAAA-----G-TA-TA--T-AA-----------C----------------T
i Helogale_parvula.HelPar_flattened_line_22962          I 432 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                26300  5 -     91191 ------------------------------------CGAA-----A-----------------------------------------
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 416 I 1
s Heterocephalus_glaber.JH602058.1                        2549941 44 +  31725842 gaaagaaagtct-----t-ccctcccttccaGG-TCCAAA-----AGAA-GA--t-tg-----------c----------------t
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               56377 15 +     73687 ------------------------------------CAAA-----GCCA-GA--A-GG-----------C----------------C
i Heterohyrax_brucei.HetBruBak_scaffold_25354           I 1939 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              145879  5 +    277961 ------------------------------------CAAA-----A-----------------------------------------
i Hippopotamus_amphibius.HipAmp_scaffold_1308           I 430 I 1
s Hipposideros_armiger.JXIK01001085.1                      277196 14 -    477199 ------------------------------------TGAA-----G-TA-GA--T-AA-----------C----------------T
i Hipposideros_armiger.JXIK01001085.1                   I 408 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              6355 14 -      9143 ------------------------------------TGAA-----G-TA-GA--T-AA-----------C----------------T
i Hipposideros_galeritus.HipGal_scaffold_104691         I 409 C 0
s Hoolock_leuconedys.ctg79                                      3581 40 -   7690867 ga----aagttc-----t-tccAGTCCTACAGT-TCCAAA-----ATAA-AA--T-AG-----------C----------------T
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 14487 14 -     67322 ------------------------------------TAAA-----G-TA-GA--T-AA-----------C----------------T
i Hyaena_hyaena.HyaHya_flattened_line_20729             I 474 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           17843 30 -    119109 ga----aagtct-----t-C----------AGG-CCCAAA-----AGAA-GG--T-AG-----------C----------------T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              4007 40 +      5897 ga----aagttc-----t-gccAGTCCTACAGT-TCCAAA-----AGAA-AA--T-AG-----------C----------------T
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_624065                                871 40 +      2112 ga----aagttc-----t-gccagtcctacaGT-TCCAAA-----GGAA-AA--T-AG-----------C----------------T
i Hylobates_agilis.k141_624065                          C 0 C 0
s Hylobates_klossii.k141_466549                             10447 40 +     11537 ga----aagttc-----t-gccagtcctacaGT-TCCAAA-----GGAA-AA--T-AG-----------C----------------T
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14623552 40 -  25970782 ga----aagttc-----t-gccAGTCCTACAGT-TCCAAA-----AGAA-AA--T-AG-----------C----------------T
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1002428                             813 40 +      1029 ga----aagttc-----t-gccagtcctacaGT-TCCAAA-----AGAA-AA--T-AG-----------C----------------T
i Hylobates_muelleri.k141_1002428                       I 21 n 40
s Hystrix_cristata.HysCri_scaffold_50788                     5007 40 +     22540 ga----acatct-----t-ccctcccctacaGC-TCCAAA-----AGAA-GA--T-AG-----------C----------------T
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7124734 32 +  13083262 -----------t-----t-ctctt-cttatcgT-TCCAAA-----AGAA-AA--T-AG-----------C----------------T
i Ictidomys_tridecemlineatus.JH393315.1                 I 2 C 0
s Indri_indri.k141_4418183                                    309 40 -      1457 GA----CAGTCT-----T-CCCTCCTCTATAGT-TCCAGA-----AGAA-GA--T-TG-----------C----------------T
i Indri_indri.k141_4418183                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               7632  5 +     17520 ------------------------------------CAAA-----A-----------------------------------------
i Inia_geoffrensis.IniGeo_flattened_line_66725          I 437 I 1
s Jaculus_jaculus.JH725517.1                              8564561 28 +  11848649 --------------------ACCTTCCTCCAGT-TTCAAA-----AGAT-GA--T-GA-----------------------------
i Jaculus_jaculus.JH725517.1                            I 7 I 1
s Kogia_breviceps.KogBre_flattened_line_35920               22464  5 +     37189 ------------------------------------CAAA-----A-----------------------------------------
i Kogia_breviceps.KogBre_flattened_line_35920           I 443 I 1
s Lagothrix_lagothricha.k141_12968                          49029 40 -    147782 GA----AAGTTT-----T-CCCAGTCCTACAGT-TCCAAA-----AGAA-GC--T-GG-----------C----------------T
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   112354 11 -    115756 ---------------------------------------A-----A-TA-GA--T-AA-----------C----------------T
i Lasiurus_borealis.LasBor_scaffold_5102                I 417 I 243
s Lemur_catta.scaffold_1                                258406046 40 - 285822530 ga----cagcct-----t-ccctcctccATAGT-TCCAAA-----AGAA-GA--T-TG-----------C----------------T
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        22809 40 +     39228 ga----cagtct-----t-ccctcctctataGT-TCCAAA-----AGAA-GA--T-TG-----------C----------------T
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            52184 40 +     63517 ga----cagtct-----t-ccctcctctataGT-TCCAAA-----AGAA-GA--T-TG-----------C----------------T
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        77434 40 +    116806 ga----cagtct-----t-cccttCTCTATAGT-TCCAAA-----AGAA-GA--T-TG-----------C----------------T
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     30448 40 -     33031 ga----cagtct-----t-ccctcctctataGT-TCCAAA-----AGAA-GA--T-TG-----------C----------------T
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3084186 14 -   3498232 ------------------------------------CAAA-----G-TA-GA--T-AA-----------C----------------T
i Leptonychotes_weddellii.KB714749.1                    I 458 C 0
s Lipotes_vexillifer.KE558548.1                            134797  5 +   3060487 ------------------------------------CAAA-----A-----------------------------------------
i Lipotes_vexillifer.KE558548.1                         I 444 I 1
s Lepus_americanus.LepAme_scaffold_62849                    11833 19 +     22452 ga----aagtct-----t-ctcttccctC----------------------------------------------------------
i Lepus_americanus.LepAme_scaffold_62849                C 0 I 2
s Lophocebus_aterrimus.ctg55                             19247179 39 +  19376315 ga----aagttt-----t-cccA-TCCTACCAT-TCCGAA-----AGAG-AA--T-AG-----------C----------------T
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            9560 33 +     84689 gg----caaact-----t-ccctcccctGTACT-TCCAAA-----AGAT--------------------------------------
i Loris_lydekkerianus.k141_550999                       C 0 I 4
s Loris_tardigradus.ctg97                                 3777309 33 +   6799190 gg----caaact-----t-ccctcccctGTACT-TCCAAA-----AGAT--------------------------------------
i Loris_tardigradus.ctg97                               C 0 I 4
s Loxodonta_africana.GL010040.1                          20590917 15 -  62548349 ------------------------------------CAAA-----ACCA-GG--T-AG-----------C----------------C
i Loxodonta_africana.GL010040.1                         I 1702 C 0
s Lycaon_pictus.CM007556.1                               11085538 14 +  39895028 ------------------------------------CAAA-----G-TA-GA--T-AA-----------C----------------T
i Lycaon_pictus.CM007556.1                              I 449 C 0
s Macaca_arctoides.k141_2201161                             18919 39 +     74745 GA----AAGTTT-----T-CCCA-TCCTACCAT-TCCGAA-----AGAG-AA--T-AG-----------C----------------T
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12705375 39 +  12821369 ga----aagttt-----t-cccA-TCCTACCAT-TCCGAA-----AGAG-AA--T-AG-----------C----------------T
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                1020 39 -      3136 ga----aagttt-----t-cccA-TCCTACCAT-TCCGAA-----AGAG-AA--T-AG-----------C----------------T
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           45837 39 +     63263 ga----aagttt-----t-ccca-tcCTACCAT-TCCGAA-----AGAG-AA--T-AG-----------C----------------T
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                  540 39 -      2568 ga----aagttt-----t-cccA-TCCTACCAT-TCCGAA-----AGAG-AA--T-AG-----------C----------------T
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 1126 39 -      7381 GA----AAGTTT-----T-CCCA-TCCTACCAT-TCCGAA-----AGAG-AA--T-AG-----------C----------------T
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  44344 39 -     79256 ga----aagttt-----t-cccA-TCCTACCAT-TCCGAA-----AGAG-AA--T-AG-----------C----------------T
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196034452 39 + 196197964 GA----AAGTTT-----T-CCCA-TCCTACCAT-TCCGAA-----AGAG-AA--T-AG-----------C----------------T
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11444619 39 +  11645122 GA----AAGTTT-----T-CCCA-TCCTACCAT-TCCGAA-----AGAG-AA--T-AG-----------C----------------T
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   3291 39 -     46448 ga----aagttt-----t-cccA-TCCTACCAT-TCCGAA-----AGAG-AA--T-AG-----------C----------------T
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                 963 39 -     13212 GA----AAGTTT-----T-CCCA-CCCTACCAT-TCCGAA-----AGAG-AA--T-AG-----------C----------------T
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 14643 39 -     55006 ga----aagttt-----t-cccA-TCCTACCAT-TCCGAA-----AGAG-AA--T-AG-----------C----------------T
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43839761 39 +  43892939 GA----AAGTTT-----T-CCCA-TCCTACCAT-TCCGAA-----AGAG-AA--T-AG-----------C----------------T
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               15930 39 -     24607 ga----aagttt-----t-cccA-TCCTACCAT-TCCGAA-----AGAG-AA--T-AG-----------C----------------T
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               3296 39 -     27140 ga----aagttt-----t-cccA-TCCTACCAT-TCCAAA-----AGAG-AA--T-AG-----------C----------------T
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                700405 14 +    802869 ------------------------------------CAAA-----G-CA-GA--T-AA-----------T----------------T
i Macroglossus_sobrinus.MacSob_scaffold_879             I 431 C 0
s Mandrillus_leucophaeus.scaffold125                     43436338 39 -  43563597 ga----aagttt-----t-cccA-TCCTACCAT-TCCGAA-----AGAG-AA--T-AG-----------C----------------T
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4449164 39 -   4543643 ga----aagttt-----t-ccca-tcCTACCAT-TCCGAA-----AGAG-AA--T-AG-----------C----------------T
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            144904 14 +    252755 ------------------------------------CATA-----C-TA-GA--T-AA-----------C----------------T
i Manis_javanica.JSZB01003966.1                         I 438 C 0
s Manis_pentadactyla.KN017078.1                             34979 14 +     58827 ------------------------------------cATA-----C-TA-GA--T-AA-----------C----------------T
i Manis_pentadactyla.KN017078.1                         I 441 C 0
s Marmota_marmota.CZRN01000005.1                         36872573 32 +  64221397 -----------t-----t-ctctt-cttatcat-tctaaa-----agaa-aa--t-ag-----------c----------------t
i Marmota_marmota.CZRN01000005.1                        I 2 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       63204 14 -    234502 ------------------------------------CAAA-----G-TA-GA--T-AA-----------G----------------T
i Megaderma_lyra.MegLyr_scaffold_3562                   I 576 C 0
s Mellivora_capensis.MelCap_flattened_line_146202             779 14 -      1999 ------------------------------------CAAA-----G-TA-GA--T-AA-----------C----------------T
i Mellivora_capensis.MelCap_flattened_line_146202       I 452 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               10605 34 +     15977 -A----AAGTAT-----T-CACTC-CCTACAGT-TACAAA-----TGAA-AA--C--------------------------------
i Meriones_unguiculatus.MerUng_scaffold_52233           I 1 I 677
s Mesocricetus_auratus.KB708139.1                         1045540 34 -  26018355 -A----AAGTAT-----T-CCTTC-CCTATAGT-TCCAAA-----GGAA-AA--C--------------------------------
i Mesocricetus_auratus.KB708139.1                       I 1 I 5
s Microcebus_murinus.CM007691.1                          16509051 40 +  47401472 GA----TAGTCT-----T-CCCTCCTCTGTAGT-TCCAAA-----AGAA-GA--T-TG-----------C----------------T
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  30484 16 -     48017 ------------------------------------CCAA-----AGTA-GAT-T-AG-----------T----------------T
i Microgale_talazaci.MicTal_scaffold_34660              I 1133 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               21478 11 -     32043 ---------------------------------------T-----G-TA-AA--T-AA-----------C----------------T
i Micronycteris_hirsuta.MicHir_scaffold_37978           I 428 C 0
s Microtus_ochrogaster.CM001673.1                        22818650 34 -  98408828 -A----AAATAT-----T-CCCTC-CCAACAGT-TCCAAA-----GGAA-AA--C--------------------------------
i Microtus_ochrogaster.CM001673.1                       I 1 I 5
s Miniopterus_natalensis.LDJU01000022.1                   8208229 11 +  10048721 ---------------------------------------A-----G-CA-Ga--c-aa-----------c----------------t
i Miniopterus_natalensis.LDJU01000022.1                 I 420 I 223
s Miniopterus_schreibersii.MinSch_scaffold_24116            32901 11 +     45743 ---------------------------------------A-----G-CA-GA--C-AA-----------C----------------T
i Miniopterus_schreibersii.MinSch_scaffold_24116        I 421 I 207
s Miopithecus_ogouensis.k141_2935907                          891 39 +     29742 ga----aaggtt-----t-cccA-TCCTACCAT-TCCGAA-----AGAG-AA--T-AG-----------C----------------T
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         9694 14 -    104932 ------------------------------------CAAA-----G-CA-GA--T-AA-----------C----------------T
i Mirounga_angustirostris.MirAng_flattened_line_8852    I 661 C 0
s Mirza_zaza.k141_226143                                     4451 30 +      8497 ga----tagtct-----t-ccctccTC-----------AA-----AGAA-GA--T-TG-----------C----------------T
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 145232  5 +    154973 ------------------------------------CAAA-----A-----------------------------------------
i Monodon_monoceros.MonMon_M_scaffold_5598              I 442 I 1
s Mormoops_blainvillei.MorMeg_scaffold_2952                159984 13 +    265003 ---------------------------------------A-----G-TA-GATAT-AA-----------C----------------T
i Mormoops_blainvillei.MorMeg_scaffold_2952             I 424 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 3404  5 -      4346 ------------------------------------CGAA-----A-----------------------------------------
i Moschus_moschiferus.MosMos_scaffold_146101            I 432 I 1
s Mungos_mungo.MunMun_flattened_line_8729                  143083 14 -    168139 ------------------------------------CAAA-----G-TA-TA--T-AA-----------C----------------T
i Mungos_mungo.MunMun_flattened_line_8729               I 430 C 0
s Murina_feae.MurFea_scaffold_2254                          17865 11 -    100666 ---------------------------------------A-----G-TA-GA--T-AA-----------C----------------T
i Murina_feae.MurFea_scaffold_2254                      I 414 I 250
s Mus_caroli.LT608236.1                                  70765141 39 +  92629107 -A----AAGTTTCTA-GT-CCCTT-CCTTTACG-TTCAAA-----TGAAAAA--C--------------------------------
i Mus_caroli.LT608236.1                                 I 1 I 5
s Mus_musculus.chr16                                     75488178 39 +  98207768 -A----AAGTTCCTA-GT-CCCTT-CCTTTACG-TTCAAA-----TGAAAAA--C--------------------------------
i Mus_musculus.chr16                                    I 1 I 5
s Mus_pahari.LT608305.1                                  67554419 40 +  89017189 -A----AAATTTCCAAGT-CCCTT-CCTTTATG-TTCAAA-----TGAAAAA--C--------------------------------
i Mus_pahari.LT608305.1                                 I 1 I 5
s Mus_spretus.CM004110.1                                 74329357 39 +  97876770 -A----AAGTTCCTA-GC-CCCTT-CCTTTATA-TTCAAG-----TGTAAAA--C--------------------------------
i Mus_spretus.CM004110.1                                I 1 I 5
s Muscardinus_avellanarius.MusAve_scaffold_9643             10227 40 +     98495 GA----AAGTCT-----T-TACTCTCTTACAGT-TGCATA-----AGGA-AA--T-AC-----------C----------------T
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 256 C 0
s Mustela_putorius.JH417978.1                             4422351 14 -  28371801 ------------------------------------CAAA-----G-TA-GA--T-AA-----------C----------------T
i Mustela_putorius.JH417978.1                           I 453 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     88878 56 -    117718 aa----aagtct-----t-cactcctttacaGG-TCCAAATAATTAAAA-AG--T-AAATATATAAATTA----------------T
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               966190 11 +   8389877 ---------------------------------------A-----G-TA-GA--T-AA-----------c----------------t
i Myotis_brandtii.KE161952.1                            I 418 I 222
s Myotis_davidii.KB114863.1                               5017879 11 +   6462685 ---------------------------------------A-----G-TA-GA--T-AA-----------c----------------t
i Myotis_davidii.KB114863.1                             I 416 I 208
s Myotis_lucifugus.GL429887.1                             3463776 11 -   3747815 ---------------------------------------A-----G-TA-GA--T-AA-----------c----------------t
i Myotis_lucifugus.GL429887.1                           I 417 I 222
s Myotis_myotis.MyoMyo_scaffold_6123                         8970 11 +     66751 ---------------------------------------A-----G-TA-GA--T-AA-----------C----------------T
i Myotis_myotis.MyoMyo_scaffold_6123                    I 416 I 244
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3864  5 -      8794 ------------------------------------AGAT-----A-----------------------------------------
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        I 432 I 3
s Nannospalax_galili.KL201303.1                            117010 38 +    362372 -a----aaatat-----t-cgctc-cctacaCT-TCCAGA-----AGGA-AA--T-AG-----------C----------------T
i Nannospalax_galili.KL201303.1                         I 2 C 0
s Nasalis_larvatus.k141_153429                               7392 40 +     48152 ga----aagttt-----t-cccactcctacCAT-TCCAAA-----AGAG-AA--T-AG-----------C----------------T
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4483086 14 -  14209539 ------------------------------------CAAA-----G-TA-GA--T-AA-----------C----------------T
i Neomonachus_schauinslandi.NINY01007774.1              I 454 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3949845  5 -   4490290 ------------------------------------CAAA-----A-----------------------------------------
i Neophocaena_asiaeorientalis.KZ688543.1                I 443 I 1
s Noctilio_leporinus.NocLep_scaffold_12062                  48091 11 +     94413 ---------------------------------------A-----G-TA-GA--T-AA-----------C----------------T
i Noctilio_leporinus.NocLep_scaffold_12062              I 415 C 0
s Nomascus_annamensis.k141_302224                             856 40 +      1516 ga----aagttc-----t-gccagtcctacaGT-TCCAAA-----AGAA-AA--T-AG-----------C----------------T
i Nomascus_annamensis.k141_302224                       C 0 C 0
s Nomascus_concolor.k141_226614                               109 40 -      5092 ga----aagttc-----t-gccAGTCCTACAGT-TCCAAA-----AGAA-AA--T-AG-----------C----------------T
i Nomascus_concolor.k141_226614                         N 0 C 0
s Nomascus_gabriellae.k141_642452                             892 40 +      2851 ga----aagttc-----t-gccagtcctacaGT-TCCAAA-----AGAA-AA--T-AG-----------C----------------T
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_a.k141_595747                                  1530 40 +      4512 ga----aagttc-----t-gccagtcctacaGT-TCCAAA-----AGAA-AA--T-AG-----------C----------------T
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                28531 14 +   3668941 ------------------------------------CAAA-----G-TA-GA--T-AA-----------C----------------T
i Nyctereutes_procyonoides.CAJHUB010000786.1            I 449 C 0
s Nycticebus_bengalensis.LG16                            65566001 28 -  95554990 GG----CAAACT-----T------CCCTGTACT-TCCAAA-----AGAT--------------------------------------
i Nycticebus_bengalensis.LG16                           C 0 I 4
s Nycticebus_coucang.k141_2051882                            2730 28 +      6470 GG----CAAACT-----T------CCCTGTACT-TCCAAA-----AGAT--------------------------------------
i Nycticebus_coucang.k141_2051882                       C 0 I 4
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65668339 28 +  89412551 gg----caaact-----t------cccTGAACT-TCCAAA-----AGAT--------------------------------------
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 I 4
s Ochotona_princeps.JH802095.1                            4994857 37 -  23139505 -------AGTGA-----T-GTCTTCCTTTCAGT-TCCAAA-----GGAA-TA--T-GG-----------G----------------C
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3684417 56 +  10294119 GG----AAATCT-----T-CACTCCTTCACACA-TCCAAATAATTAAAA-GG--T-AAATAGGTAGGCTA----------------T
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             677731 14 -   3126709 ------------------------------------CAAA-----G-TA-GA--T-AA-----------C----------------T
i Odobenus_rosmarus.KB229369.1                          I 443 C 0
s Odocoileus_virginianus.KZ101650.1                       1078532  5 +   1425656 ------------------------------------CGAA-----A-----------------------------------------
i Odocoileus_virginianus.KZ101650.1                     I 432 I 1
s Okapia_johnstoni.LVCL01S0017931.1                         35828  5 +     78940 ------------------------------------CAAA-----A-----------------------------------------
i Okapia_johnstoni.LVCL01S0017931.1                     I 573 I 1
s Ondatra_zibethicus.OndZib_scaffold_6821                  123907 34 +    145789 -A----AAATAT-----T-CCCTC-CCAACAGT-TCAAAA-----AGAA-AA--C--------------------------------
i Ondatra_zibethicus.OndZib_scaffold_6821               I 1 I 5
s Onychomys_torridus.OnyTor_scaffold_12578                  35679 34 +     62360 -A----AAGCAT-----T-CCCTC-CCGACAGT-TCCATA-----TGAC-AA--C--------------------------------
i Onychomys_torridus.OnyTor_scaffold_12578              I 1 I 5
s Orcinus_orca.KB316965.1                                 7223529  5 -   7562323 ------------------------------------CAAA-----A-----------------------------------------
i Orcinus_orca.KB316965.1                               I 443 I 1
s Orycteropus_afer.OryAfe_flattened_line_13509              43235 15 -     66828 ------------------------------------CAAA-----ACCA-AA--T-AG-----------C----------------C
i Orycteropus_afer.OryAfe_flattened_line_13509          I 1764 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      305865 14 -    505867 ------------------------------------CAAA-----G-TA-GA--T-AA-----------C----------------T
i Otocyon_megalotis.JAEUCK010005121.1                   I 444 C 0
s Oryctolagus_cuniculus.CM000803.1                      141874491 20 + 163896628 gaa---aagtct-----t-ctcttccctC----------------------------------------------------------
i Oryctolagus_cuniculus.CM000803.1                      C 0 I 2
s Otolemur_crassicaudatus.k141_321880                       37892 33 +     38679 GG----CCAACT-----T-CCTTCCCCTTCACT-TCCAAA-----AGAC--------------------------------------
i Otolemur_crassicaudatus.k141_321880                   C 0 I 4
s Otolemur_garnettii.GL873528.1                          18007320 33 -  38779656 GG----CCAACT-----T-CCTTCCCCTTCACT-TCCAAA-----AGAC--------------------------------------
i Otolemur_garnettii.GL873528.1                         C 0 I 4
s Ovis_aries.CM001582.2                                 134076094  5 - 275406953 ------------------------------------CGAA-----A-----------------------------------------
i Ovis_aries.CM001582.2                                 I 417 I 1
s Ovis_canadensis.OviCan_scaffold_6251                      77308  5 +    140051 ------------------------------------CGAA-----A-----------------------------------------
i Ovis_canadensis.OviCan_scaffold_6251                  I 417 I 1
s Pan_paniscus.CM003386.1                               127573541 40 - 205426864 GA----AAGTTC-----T-CCCAGTCCTACAGT-TCCAAA-----AGAA-AA--G-AG-----------C----------------T
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120150694 40 - 196562556 GA----AAGTTC-----T-CCCAGTCCTACAGT-TCCAAA-----AGAA-AA--G-AG-----------C----------------T
i Pan_troglodytes.CM009241.2                            C 0 I 2
s Panthera_onca.PanOnc_flattened_line_1615                  32547 14 +    295523 ------------------------------------TAAA-----G-TA-GA--T-AG-----------C----------------T
i Panthera_onca.PanOnc_flattened_line_1615              I 431 C 0
s Panthera_pardus.KV860323.1                              3636281 14 +  18214204 ------------------------------------taaa-----G-TA-GA--T-AG-----------C----------------T
i Panthera_pardus.KV860323.1                            I 432 C 0
s Panthera_tigris.KE721879.1                              5025928 14 -   6340057 ------------------------------------taaa-----g-TA-GA--T-AG-----------C----------------T
i Panthera_tigris.KE721879.1                            I 431 C 0
s Pantholops_hodgsonii.KE114631.1                         1064955  5 -   1292953 ------------------------------------CAAA-----A-----------------------------------------
i Pantholops_hodgsonii.KE114631.1                       I 417 I 1
s Papio_anubis.CM001492.2                               188155129 39 - 188283584 GA----AAGTTT-----T-CCCA-TCCTACCAT-TCCGAA-----AGAG-AA--T-AG-----------C----------------T
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             3446 39 +      5367 ga----aagttt-----t-tccA-TCCTACCAT-TCCGAA-----AGAG-AA--T-AG-----------C----------------T
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47512517 39 +  47705337 ga----aagttt-----t-cccA-TCCTACCAT-TCCGAA-----AGAG-AA--T-AG-----------C----------------T
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 66495 39 -    104429 ga----aagttt-----t-cccA-TCCTACCAT-TCCGAA-----AGAG-AA--T-AG-----------C----------------T
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    5027 39 +     14967 ga----aagttt-----t-cccA-TCCTACCAT-TCTGAA-----AGAG-AA--T-AG-----------C----------------T
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                  888 39 -      7628 ga----aagttt-----t-tccA-TCCTACCAT-TCCGAA-----AGAG-AA--T-AG-----------C----------------T
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113863 14 -    135482 ------------------------------------CAAG-----G-TA-GA--T-AA-----------C----------------T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 I 447 C 0
s Perodicticus_ibeanus.k141_117958                           3933 33 -     23713 gg----aaaact-----t-ccttcctttccAGT-TCtaaa-----agag--------------------------------------
i Perodicticus_ibeanus.k141_117958                      C 0 I 4
s Perodicticus_potto.k141_713187                            23231 33 -     27972 gg----aaaact-----t-ccttcctttccAGT-TCTAaa-----agag--------------------------------------
i Perodicticus_potto.k141_713187                        C 0 I 4
s Perognathus_longimembris.PerPac_flattened_line_22291      42476 28 -     45160 -A----AAGT-T-----T-CTTTGTGCAAC--T-TGGAAA-----AGA---------------------------------------
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 I 3
s Peromyscus_maniculatus.KI615518.1                       4948865 34 -   8017169 -A----GAGTAT-----T-CACTC-CCAACAGT-TCCATA-----TGAC-AA--C--------------------------------
i Peromyscus_maniculatus.KI615518.1                     I 1 I 5
s Petromus_typicus.PetTyp_scaffold_33007                    11096 40 -     36578 ag----aagtct-----g-ctctgtcctataGG-TCCAAA-----AGAG-GA--T-AG-----------C----------------T
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            120146  5 -    122454 ------------------------------------CAAA-----A-----------------------------------------
i Phocoena_phocoena.PhoPho_flattened_line_11948         I 443 I 1
s Piliocolobus_badius.k141_1987485                            914 40 -      5908 ga----aatttt-----t-cccactcctacCAT-TCCGAA-----AGAG-AA--T-AG-----------C----------------T
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       1534 40 -     17985 ga----aatttt-----t-ctcactcctacCAT-TCCGAA-----AGAG-AA--T-AG-----------C----------------T
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                             901 40 +      7694 ga----aatttt-----t-ctcactcctacCAT-TCCGAA-----AGAG-AA--T-AG-----------C----------------T
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26739379 40 +  26888534 GA----AATTTT-----T-CTCACTCCTACCAT-TCCGAA-----AGAG-AA--T-AG-----------C----------------T
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            95634 11 +    112873 ---------------------------------------A-----G-TA-GA--T-AA-----------C----------------T
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        I 410 I 192
s Pithecia_albicans.k141_991845                             42511 40 -     61926 ga----aagttt-----t-cccAGTCCCACAGT-TCCAAA-----AGAA-GC--T-GG-----------C----------------T
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        23942 40 +     78826 ga----aagttt-----t-cccAGTCCTACAGT-TCCAAA-----AGAA-GC--T-GG-----------C----------------T
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              7891 40 -     15800 ga----aagttt-----t-cccAGTCCCACAGT-TCCAAA-----AGAA-GC--T-GG-----------C----------------T
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        11089 40 -     16101 ga----aagttt-----t-cccAGTCCCACAGT-TCCAAA-----AGAA-GC--T-GG-----------C----------------T
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          4398 40 +      9673 ga----aagttt-----t-cccAGTCCCACAGT-TCCAAA-----AGAA-GC--T-GG-----------C----------------T
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13473394 40 -  19735023 ga----aagttt-----t-cccAGTCCCACAGT-TCCAAA-----AGAA-GC--T-GG-----------C----------------T
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           12300 40 -     31692 ga----aagttt-----t-cccAGTCCCACAGT-TCCAAA-----AGAA-GC--T-GG-----------C----------------T
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           4214  5 +     21690 ------------------------------------CGAA-----A-----------------------------------------
i Platanista_gangetica.PlaMin_flattened_line_72990      I 443 I 1
s Plecturocebus_bernhardi.k141_959214                       21736 40 +     44506 ga----aagttt-----t-ccctgtcctacaGT-TCTAAA-----AGAA-GC--T-AA-----------C----------------T
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        21948 40 +     67491 ga----aagttt-----t-ccctgtcctacaGT-TCTAAA-----AGAA-GC--T-AA-----------C----------------T
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      12187 40 -     98129 ga----aagttt-----t-ccctgtcctacaGT-TCTAAA-----AGAA-GC--T-AA-----------C----------------T
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     21787 40 +    147771 ga----aagttt-----t-ccctgtcctacaGT-TCTAAA-----AGAA-GC--T-AA-----------C----------------T
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        22042 40 -     23762 ga----aagttt-----t-ccctgtcctacaGT-TCTAAA-----AGAA-GC--T-AA-----------C----------------T
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          2508 40 -     55515 ga----aagttt-----t-ccctgtcctacaGT-TCTAAA-----AGAA-GC--T-AA-----------C----------------T
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         21861 40 +    152463 ga----aagttt-----t-ccctgtcctacaGT-TCTAAA-----AGAA-GC--T-AA-----------C----------------T
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      8621 40 +      8943 ga----aagttt-----t-ccctgtcctacaGT-TCTAAA-----AGAA-GC--T-AA-----------C----------------T
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                         11583 40 +    134592 ga----aagttt-----t-ccctgtcctacaGT-TCTAAA-----AGAA-GC--T-AA-----------C----------------T
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          22171 40 -     75465 ga----aagttt-----t-ccctgtcctacaGT-TCTAAA-----AGAA-GC--T-AA-----------C----------------T
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              186066 40 -    373494 GA----AAGTTC-----T-CCCAGTCCTACAGT-TCCAAA-----AGAA-AA--T-AG-----------C----------------T
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19806714 40 +  19899266 ga----aagttc-----t-cccagtcctacaGT-TCCAAA-----AGAA-AA--T-AG-----------C----------------T
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               4636 40 -     15069 ga----aagttt-----t-cccACTCCCACCAT-TCCAAA-----AGAG-AA--T-AG-----------C----------------G
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              4770 40 +     14865 ga----aagttt-----t-cccACTCCCACCAT-TCCAAA-----AGAG-AA--T-AG-----------T----------------G
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                76241 15 +     78963 ------------------------------------CAAA-----GCCA-GA--A-GG-----------C----------------C
i Procavia_capensis.ProCapCap_scaffold_15315            I 1939 C 0
s Prolemur_simus.MPIZ01000048.1                           6847427 40 +  12164890 ga----cagcct-----t-ccctcctcCATAGT-TCCAAA-----AGAA-GA--T-TG-----------C----------------T
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    666649 40 -   2312742 gA----CAGTCT-----T-CCCTCCTCTATAGT-TCCAGA-----AGAA-GA--C-TG-----------C----------------T
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         2476 40 +     11805 ga----cagtct-----t-ccctcctctataGT-TCCAGA-----AGAA-GA--C-TG-----------C----------------T
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           41812 40 +     52369 ga----cagtct-----t-ccctcctctataGT-TCCAGA-----AGAA-GA--C-TG-----------C----------------T
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         34202 40 -     44753 ga----cagtct-----t-ccctccTCAATAGT-TCCAGA-----AGAA-GA--C-TG-----------C----------------T
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            16122 40 +     27322 ga----cagtct-----t-ccctcctctataGT-TCCAGA-----AGAA-GA--C-TG-----------C----------------T
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       15758 40 -     53241 ga----cagtct-----t-ccctccTTTATAGT-TCCGGA-----AGAA-GA--T-TG-----------C----------------T
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         38030 40 -     48185 ga----cagtct-----t-ccctcctctataGT-TCCGGA-----AGAA-GA--T-TG-----------C----------------T
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           32155 34 +     77221 -A----AAGTAT-----T-CACTC-CCTACAGT-TACAAA-----TGAA-AA--T--------------------------------
i Psammomys_obesus.NESX01026517.1                       I 1 I 665
s Pteronotus_parnellii.KE867983.1                            2652 11 -     27784 ---------------------------------------A-----G-TA-GA--T-AA-----------C----------------T
i Pteronotus_parnellii.KE867983.1                       I 422 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        244445 14 -    344369 ------------------------------------CAAA-----G-TA-GA--T-AA-----------C----------------T
i Pteronura_brasiliensis.PteBra_flattened_line_1343     I 454 C 0
s Pteropus_alecto.KB031157.1                             13244792 14 -  17261082 ------------------------------------CAAA-----G-TA-GA--T-AA-----------T----------------T
i Pteropus_alecto.KB031157.1                            I 438 C 0
s Pteropus_vampyrus.KN525959.1                             602742 14 -   3946241 ------------------------------------CAAA-----G-TA-GA--T-AA-----------T----------------T
i Pteropus_vampyrus.KN525959.1                          I 437 C 0
s Puma_concolor.QAVW01000427.1                          131532510 14 - 161321710 ------------------------------------taaa-----g-TA-GA--T-AA-----------C----------------T
i Puma_concolor.QAVW01000427.1                          I 431 C 0
s Pygathrix_cinerea.k141_374971                             28754 40 +     56732 ga----aagttt-----t-cccactcctacCAT-TCCAAA-----AGAG-AA--T-AG-----------C----------------T
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6805245 40 +   6970761 ga----aagttt-----t-cccactcctacCAT-TCCAAA-----AGAG-AA--T-AG-----------C----------------T
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             4639 40 +     18040 ga----aagttt-----t-cccactcctacCAT-TCCAAA-----AGAG-AA--T-AG-----------C----------------T
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                14609  5 +     68503 ------------------------------------CGAA-----A-----------------------------------------
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 431 I 1
s Rattus_norvegicus.chr11                                13914184 38 +  90463843 -A----AAGTATTC-CCT-Accct-attttatt-ttcaaa-----tgaa-ag--c--------------------------------
i Rattus_norvegicus.chr11                               I 1 I 5
s Rhinolophus_sinicus.LVEH01000179.1                      1786602 14 +   2252614 ------------------------------------TGAA-----G-TA-GA--T-AA-----------C----------------C
i Rhinolophus_sinicus.LVEH01000179.1                    I 430 C 0
s Rhinopithecus_bieti.k119_1391695                            867 40 -      1866 ga----aagttt-----t-cccactcctacCAT-TCCAAA-----AGAG-AA--T-AG-----------C----------------T
i Rhinopithecus_bieti.k119_1391695                      C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206376524 40 - 206558726 ga----aagttt-----t-cccacTCCTACCAT-TCCAAA-----AGAG-AA--T-AG-----------C----------------T
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44855424 40 -  45163003 ga----aagttt-----t-cccactcctacCAT-TCCAAA-----AGAG-AA--T-AG-----------C----------------T
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                18082 14 +    109198 ------------------------------------CAAA-----G-TA-GA--T-AA-----------T----------------T
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            I 435 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       6411  5 +     12214 ------------------------------------CAAA-----A-----------------------------------------
i Saiga_tatarica.SaiTat_scaffold_82192                  I 428 I 1
s Saimiri_boliviensis.NW_024100938.1                     15671599 40 -  43202129 ga----aagtTT-----T-CCCAGTCCTACAGT-TCCAAA-----AGAA-GC--T-GG-----------C----------------T
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        3516 40 +     34089 ga----aagttt-----t-cccAGTCCTACAGT-TCCAAA-----AGAA-GC--T-GG-----------C----------------T
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              3457 40 -     60842 ga----aagttt-----t-cccAGTCCTACAGT-TCCAAA-----AGAA-GC--T-GG-----------C----------------T
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              3552 40 +     67014 ga----aagttt-----t-cccAGTCCTACAGT-TCCAAA-----AGAA-GC--T-GG-----------C----------------T
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              3530 40 +     60816 ga----aagttt-----t-cccAGTCCTACAGT-TCCAAA-----AGAA-GC--T-GG-----------C----------------T
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 3467 40 -     76454 ga----aagttt-----t-cccAGTCCTACAGT-TCCAAA-----AGAA-GC--T-GG-----------C----------------T
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17340192 40 -  30362882 ga----aagttt-----t-cccagtcctacaGT-TCGAAA-----AGAA-GC--T-GG-----------C----------------T
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         19551 40 -     62485 ga----aagttt-----t-cccagtcctacaGT-TCGAAA-----AGAA-GC--T-GG-----------C----------------T
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   30171 14 -    114521 ------------------------------------CAAA-----T-TA-GA--T-GA-----------C----------------T
i Scalopus_aquaticus.ScaAqu_scaffold_9300               I 434 C 0
s Semnopithecus_entellus.k141_1572367                        2251 40 +     15331 gg----aagttt-----t-cccactcctacGAT-TCCAAA-----AGAG-AA--T-AG-----------C----------------T
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       7648 40 +     20762 gg----aagttt-----t-cccactcctacCAT-TCCAAA-----AGAG-AA--T-AG-----------C----------------T
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         117646 40 +    130994 gg----aagttt-----t-cccactcctacGAT-TCCAAA-----AGAG-AA--T-AG-----------C----------------T
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           36437 40 +     46263 gg----aagttt-----t-cccactcctacCAT-TCCAAA-----AGAG-AA--T-AG-----------C----------------T
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     29551 40 +     42640 gg----aagttt-----t-cccactcctacGAT-TCCAAA-----AGAG-AA--T-AG-----------C----------------T
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        12595 40 +     30600 gg----aagttt-----t-cccactcctacCAT-TCCAAA-----AGAG-AA--T-AG-----------C----------------T
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   98449 33 -    120886 -A----AAGTAT-----T-CTTT--TCAAAAGT-TCTAAA-----TGAG-AA--C--------------------------------
i Sigmodon_hispidus.SigHis_scaffold_11332               I 1 I 5
s Solenodon_paradoxus.SolPar_flattened_line_1012            16792 14 +    739146 ------------------------------------CAAA-----A-TA-GA--T-AA-----------T----------------T
i Solenodon_paradoxus.SolPar_flattened_line_1012        I 416 C 0
s Sorex_araneus.JH798170.1                               17749433 12 -  27805282 ------------------------------------CAAA-----G-TA-GA--T-AA-----------------------------
i Sorex_araneus.JH798170.1                              I 843 C 0
s Spermophilus_dauricus.KZ294190.1                        2238654 32 +   2842873 -----------t-----t-ctctt-cttatcgT-TCCAAA-----CGAA-AA--T-AG-----------C----------------T
i Spermophilus_dauricus.KZ294190.1                      I 2 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             233196 14 -    276980 ------------------------------------CGAG-----G-TA-GA--C-AA-----------C----------------C
i Spilogale_gracilis.SpiGra_flattened_line_905          I 445 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            25749 14 +     62062 ------------------------------------CAAA-----G-AA-TA--T-AA-----------C----------------T
i Suricata_suricatta.SurSur_flattened_line_20339        I 430 C 0
s Sus_scrofa.CM000824.4                                 189270675 14 + 218635234 ------------------------------------CAAC-----A-TA-GA--T-AG-----------C----------------T
i Sus_scrofa.CM000824.4                                 I 447 C 0
s Symphalangus_syndactylus.tarseq_24                        13809 40 -  13920577 ga----aagttc-----t-gccagtcctacaGT-TCCAAA-----AGAA-AA--T-AG-----------C----------------T
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               4581 11 -      6213 ---------------------------------------A-----G-TA-GA--T-AA-----------C----------------T
i Tadarida_brasiliensis.TadBra_scaffold_145589          I 407 I 239
s Tamandua_tetradactyla.TamTet_scaffold_26877               13539  5 +     45698 ------------------------------------AGAT-----A-----------------------------------------
i Tamandua_tetradactyla.TamTet_scaffold_26877           I 433 I 3
s Tapirus_indicus.TapInd_scaffold_176                      805530 14 +   1148477 ------------------------------------CAAA-----G-TA-GA--T-AA-----------A----------------T
i Tapirus_indicus.TapInd_scaffold_176                   I 435 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  56190 14 +     99546 ------------------------------------CAAA-----G-TA-GA--T-AA-----------A----------------T
i Tapirus_terrestris.TapTer_scaffold_14939              I 434 C 0
s Tarsius_lariang.k141_609102                               25338 40 +     42269 ga----aagtct-----t-tcctcccctgcaGT-TTCAAA-----AGAA-GA--T-AG-----------T----------------T
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               58654 40 +     65473 ga----aagtct-----t-tcctcccctgcaGT-TTCAAA-----AGAA-GA--T-AG-----------T----------------T
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194006656 39 - 194193292 GA----AAGTTT-----T-CCCA-TCCTACCAT-TCCGAA-----AGAG-AA--T-AG-----------C----------------T
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             38162 40 -     47444 ga----aagtct-----t-ccctgccctaTGGG-TCCAAA-----AGAA-GA--T-AG-----------C----------------T
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  4396  8 +      6782 ------------------------------------agaa-----AAAA--------------------------------------
i Tolypeutes_matacus.TolMat_scaffold_269431             I 2406 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  134662 11 -    259118 ---------------------------------------T-----G-TA-GA--T-AA-----------C----------------T
i Tonatia_saurophila.TonSau_scaffold_3334               I 421 C 0
s Trachypithecus_auratus.k141_738098                        25758 40 +     38948 gg----aagttt-----t-cccactcctacCAT-TCCAAA-----AGAG-AA--T-AG-----------C----------------T
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   19485 40 -     32910 gg----aagttt-----t-cccactcctacCAT-TCCAAA-----AGAG-AA--T-AG-----------C----------------T
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                       872 40 -     12939 gg----aagttt-----t-cccactcctacCAT-TCCAAA-----AGAG-AA--T-AG-----------C----------------T
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                        807 40 -     14244 gg----aagttt-----t-cccactcctacCAT-TCCAAA-----AGAG-AA--T-AG-----------C----------------T
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           42205 40 -     54611 gg----aagttt-----t-cccactcctacCAT-TCCAAA-----AGAG-AA--T-AG-----------C----------------T
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_878600                        1035 40 +      1165 gg----aagttt-----t-cccactcctacCAT-TCCAAA-----AGAG-AA--T-AG-----------C----------------T
i Trachypithecus_germaini.k141_878600                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     2183 40 -     15592 gg----aagttt-----t-cccactcctacCAT-TCCAAA-----AGAG-AA--T-AG-----------C----------------T
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                           840 40 +     14371 gg----aagttt-----t-cccactcctacCAT-TCCAAA-----AGAG-AA--T-AG-----------C----------------T
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  50592 40 +     51589 gg----aagttt-----t-cccactcctacCAT-TCCAAA-----AGAG-AA--T-AG-----------C----------------T
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       13773 40 +     14732 gg----aagttt-----t-cccactcctacCAT-TCCAAA-----AGAG-AA--T-AG-----------C----------------T
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       4245 40 -     28054 gg----aagttt-----t-cccactcctacCAT-TCCAAA-----AGAG-AA--T-AG-----------C----------------T
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44659045 40 -  44834318 gg----aagttt-----t-cccactcctacCAT-TCCAAA-----AGAG-AA--T-AG-----------C----------------T
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       1348 40 +     13828 gg----aagttt-----t-cccactcctacCAT-TCCAAA-----AGAG-AA--T-AG-----------C----------------T
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   4003  1 +     90398 ------------------------------------C--------------------------------------------------
i Tragulus_javanicus.TraJav_scaffold_14717              I 419 C 0
s Trichechus_manatus.JH594618.1                          16081379 15 +  31416278 ------------------------------------CAAA-----ACCA-GA--T-AG-----------C----------------C
i Trichechus_manatus.JH594618.1                         I 1700 C 0
s Tupaia_chinensis.KB320831.1                             2791656 39 -   3938065 ga----aagtct-----a-ccctcccctacaGT-TTCA-A-----AGAA-GA--G-AG-----------G----------------T
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    3924 39 +     13056 ga----aagtct-----a-ccctcccctacaGT-TTCA-A-----AGAA-GA--T-AG-----------G----------------T
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69312246  5 -  96451834 ------------------------------------CAAA-----A-----------------------------------------
i Tursiops_truncatus.MRVK01000923.1                     I 441 I 1
s Uropsilus_gracilis.UroGra_scaffold_139357                   696 14 +      2103 ------------------------------------AAAA-----A-TA-CA--T-AA-----------C----------------T
i Uropsilus_gracilis.UroGra_scaffold_139357             C 0 C 0
s Ursus_maritimus.KK498671.1                              6513003 14 +  28682327 ------------------------------------CAGA-----G-TA-GA--T-AA-----------A----------------T
i Ursus_maritimus.KK498671.1                            I 460 C 0
s Varecia_rubra.k141_432109                                  4134 37 -     20643 ga----cagcct-----t-ccctC---TATAGT-TCCAAA-----AGAA-GA--T-TG-----------C----------------T
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             23675 37 -     33872 ga----cagcct-----t-ccctC---TATAGT-TCCAAA-----AGAA-GA--T-TG-----------C----------------T
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1523470 14 -   2331223 ------------------------------------CAAA-----G-CA-GA--T-CA-----------C----------------T
i Vicugna_pacos.KN269600.1                              I 433 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                135938 14 -    281493 ------------------------------------CAAA-----G-TA-GA--T-AA-----------C----------------T
i Vulpes_lagopus.VulLag_flattened_line_2045             I 449 C 0
s Xerus_inauris.XerIna_scaffold_7898                       125754 33 -    134049 -----------T-----T-CTCTTCCTTATAGC-TCCAGA-----ATAA-AA--T-AG-----------C----------------T
i Xerus_inauris.XerIna_scaffold_7898                    I 2 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        212466 14 -    227762 ------------------------------------CAAA-----G-TA-GA--T-AA-----------C----------------T
i Zalophus_californianus.ZalCal_flattened_line_4097     I 448 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     14091 16 -     20485 --------------------tcttttCTACAGt-ttc--------------------------------------------------
i Zapus_hudsonius.ZapHud_scaffold_64392                 I 7 I 296
s Ziphius_cavirostris.ZipCav_flattened_line_127025           5743  5 -      8775 ------------------------------------CAAA-----A-----------------------------------------
i Ziphius_cavirostris.ZipCav_flattened_line_127025      I 442 I 1
e Dinomys_branickii.DinBra_scaffold_1996                   156356 54 +    228994 I
e Elephantulus_edwardii.JH947210.1                        7804622 10712 +  15467074 I
e Hylobates_pileatus_a.tarseq_592                             33311  5 -     60944 I
e Nomascus_siki_b.tarseq_80                             24175  0 -  18771707 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               10836 2 +    209709 AG
s Acinonyx_jubatus.LLWD01000356.1                         2032183 2 +   3721120 AG
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    111189 1 -    189883 -G
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 5 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10655530 2 +  23371972 AG
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7092455 2 -  16596857 AG
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   11859 2 -     22067 AA
i Allactaga_bullata.AllBul_scaffold_70162               I 1 C 0
s Allenopithecus_nigroviridis.k141_3103728                   1437 2 +      1665 AG
i Allenopithecus_nigroviridis.k141_3103728              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                          913 2 -     29318 AG
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_21674                           1130 2 -      1421 AG
i Allochrocebus_preussi.k141_21674                      C 0 C 0
s Allochrocebus_solatus.k141_371672                           807 2 -     80423 AG
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             9100 2 -     18050 AG
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                 10190 2 -     11521 AG
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              9777 2 -     21359 AG
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_298055                                 1073 2 +      1823 AG
i Alouatta_juara.k141_298055                            C 0 C 0
s Alouatta_macconnelli.k141_1331706                          9073 2 -     10438 AG
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            5729 2 +      7047 AG
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             9009 2 +     10410 AG
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            2819 2 -      4927 AG
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             5748 2 +      6429 AG
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      389106 2 -    631301 AG
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Aotus_azarae.k141_3170768                                 61457 2 +     78111 AG
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            4398 2 +     22701 AG
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5748355 2 +   9889416 AG
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             4940 2 -    104377 AG
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               4946 2 +     23246 AG
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     2614 2 +      5067 AT
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      16743 2 +     17483 aa
i Arctocebus_calabarensis.k141_1161114                  I 4 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 7507 2 -     29036 AG
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9538205 2 +  39197703 AG
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             59476 2 +     85812 AG
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                10488 2 +     89302 AG
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             14993 2 -     58268 AG
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             62984 2 +    119057 AG
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               4953 2 -     25888 AG
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 5587 2 -     16375 AC
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              1907 2 +      2719 AC
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Cacajao_ayresi.k141_724503                               112846 2 -    171031 AG
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 11874 2 +    125063 AG
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                13919 2 -    216513 AG
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        6459 2 -    134917 AG
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3218377 2 -   8989139 GG
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           396082 2 -  15254737 GG
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2971815 2 +   6889770 GG
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11516906 2 +  39901454 AG
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   11924 2 +     87036 AG
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11263567 2 -  35597290 AG
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11086096 2 +  39895921 AG
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16453120 2 -  44759192 AG
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capromys_pilorides.CapPil_scaffold_979108                   869 2 -      1248 AA
i Capromys_pilorides.CapPil_scaffold_979108             C 0 C 0
s Carlito_syrichta.NW_007248099.1                          307894 2 +    345090 AG
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               58304 2 +     67245 AG
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   29558 2 +     33760 AG
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   157592 2 -    276539 AA
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15785502 2 -  24422027 NN
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15797436 2 -  24440124 Aa
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       175627 2 +    436027 AA
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18889689 2 -  29618158 AG
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 7233 2 -     26817 AG
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                11473 2 +     25043 AG
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         6927 2 +     21754 AG
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4362692 2 +   7569818 AG
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         2444 2 -      9338 AG
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6554129 2 +   6739814 AG
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      25606 2 +     60454 AG
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                           811 2 -     21101 AG
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         58121 2 -    107033 AG
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        1013 2 -     17608 AG
i Cercopithecus_ascanius.k141_4123525                   I 4 C 0
s Cercopithecus_cephus.k141_598190                          28508 2 +     30494 AG
i Cercopithecus_cephus.k141_598190                      I 1 C 0
s Cercopithecus_diana.k141_2980617                          57354 2 -     59240 AG
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          1055 2 +     16677 AG
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           23213 2 +     35983 AG
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11989741 2 +  12117833 AG
i Cercopithecus_albogularis.ctg51                             I 1 C 0
s Cercopithecus_mona.ctg12                               46476499 2 +  46592721 AG
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      40050 2 -     45581 AG
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       1056 2 +     35577 AG
i Cercopithecus_nictitans.k141_1129315                  I 1 C 0
s Cercopithecus_petaurista.k141_64532                         832 2 -     25661 AG
i Cercopithecus_petaurista.k141_64532                   I 4 C 0
s Cercopithecus_pogonias.k141_3109732                         810 2 -     17744 AG
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        20419 2 +     37128 AG
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           1636 2 -      6963 AT
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      I 1 C 0
s Cheirogaleus_major.k141_1157592                           57881 2 -     68416 AG
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            6924 2 +     13308 AG
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             4489 2 -     18223 AG
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             21512 2 +     25473 AG
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           40547 2 +     57117 AG
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          45226 2 +     54541 AG
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15960647 2 +  43084221 aa
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         70048 2 +    196370 AG
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          14228 2 +     40510 AG
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15137973 2 -  15256731 AG
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      33020 2 -     53260 AG
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101143583 2 + 101219884 AG
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                15300 2 -     21363 AG
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           760611 2 +    964067 AG
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10885349 2 +  10971483 AG
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147663513 2 + 156195979 AG
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            15497 2 +     23629 AG
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60611442 2 +  78930452 AG
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         38428 2 -     40477 AG
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 277154 2 -    399297 AG
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53027841 1 +  72327488 -G
i Cricetulus_griseus.LT883672.1                         I 5 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            50198 2 -     70449 AG
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  207059 2 -    956709 AG
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 29631 2 -     67205 AA
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                16655 2 +     26546 AA
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             57747 2 -    236241 AA
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          182472 2 -   6883506 ag
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16843734 2 +  31942871 AG
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18697613 2 -  18957592 AG
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 321339 2 +    993696 AG
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   1991 2 +    151128 AG
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dipodomys_ordii.KN672545.1                              3655045 2 +   4240102 AG
i Dipodomys_ordii.KN672545.1                            I 3 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 26681 2 +     28912 AG
i Dipodomys_stephensi.DipSte_scaffold_44365             I 3 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                34993 2 -     73477 AA
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22994087 2 -  44670279 AT
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 11005 2 +     24177 AG
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        238399 1 -    369425 -A
i Ellobius_lutescens.LOEQ01003611.1                     I 5 C 0
s Ellobius_talpinus.LOJH01090055.1                           5509 1 -      7838 -a
i Ellobius_talpinus.LOJH01090055.1                      I 5 C 0
s Enhydra_lutris.KZ291749.1                              85869983 2 +  99434291 AG
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Equus_asinus.JREZ01000062.1                             5851761 2 -   7175178 AG
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13350264 2 +  41866177 AG
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          11754 2 +     92910 AG
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11531310 2 +  16010500 AG
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48770153 2 -  48907691 AG
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eulemur_albifrons.k141_715837                              3925 2 +     13586 AC
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               3862 2 -      6809 AC
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            10336 2 +     36558 AC
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             6654 2 +     60246 AC
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                10133 2 +    109717 AC
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               14516 2 +     16540 AC
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                14789 2 +     27497 AC
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           17246 2 +     26808 AC
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                31981 2 +     46535 AC
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              14703 2 -     29447 AC
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129891159 2 - 159252932 AG
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129278231 2 - 158578461 AG
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 19366 2 +     52776 AG
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13891597 2 -  19261668 aa
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     209833 2 -    847004 AA
i Galago_moholi.ctg555                                  I 4 C 0
s Galago_senegalensis.k141_964197                           12212 2 -     43889 AA
i Galago_senegalensis.k141_964197                       I 4 C 0
s Galagoides_demidoff.k141_1769638                           9281 2 +     27357 AG
i Galagoides_demidoff.k141_1769638                      I 4 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               155175 2 +    324696 AG
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           11765 2 -     18683 AG
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               4221 2 -     14630 TG
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119651320 2 - 195582420 TG
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   76495 2 +    118900 AG
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                          726 2 +     10286 AC
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_1254239                            8902 2 +      9690 AC
i Hapalemur_gilberti.k141_1254239                       C 0 C 0
s Hapalemur_griseus.k141_1387522                             4531 2 +     56096 AC
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        27781 2 -     42470 AC
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        44405 2 -     54384 AC
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              15406 2 +     53719 AG
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2549985 2 +  31725842 aa
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               56392 2 +     73687 AT
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      277210 2 -    477199 AG
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              6369 2 -      9143 AG
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      3621 2 -   7690867 AG
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 14501 2 -     67322 AG
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           17873 2 -    119109 AA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              4047 2 +      5897 AG
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_624065                                911 2 +      2112 AG
i Hylobates_agilis.k141_624065                          C 0 C 0
s Hylobates_klossii.k141_466549                             10487 2 +     11537 AG
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14623592 2 -  25970782 AG
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                             848 2 -      2977 AG
i Hylobates_muelleri.k141_1389047                       I 40 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     5047 2 +     22540 AA
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7124766 2 +  13083262 GC
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_4418183                                    349 2 -      1457 AC
i Indri_indri.k141_4418183                              C 0 C 0
s Jaculus_jaculus.JH725517.1                              8564590 2 +  11848649 AA
i Jaculus_jaculus.JH725517.1                            I 1 C 0
s Lagothrix_lagothricha.k141_12968                          49069 2 -    147782 AG
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   112608 2 -    115756 ga
i Lasiurus_borealis.LasBor_scaffold_5102                I 243 I 247
s Lemur_catta.scaffold_1                                258406086 2 - 285822530 AC
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        22849 2 +     39228 AC
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            52224 2 +     63517 AC
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        77474 2 +    116806 AC
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     30488 2 -     33031 AC
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3084200 2 -   3498232 AG
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    11854 2 +     22452 AG
i Lepus_americanus.LepAme_scaffold_62849                I 2 C 0
s Lophocebus_aterrimus.ctg55                             19247218 2 +  19376315 AG
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            9597 2 +     84689 AG
i Loris_lydekkerianus.k141_550999                       I 4 C 0
s Loris_tardigradus.ctg97                                 3777346 2 +   6799190 AG
i Loris_tardigradus.ctg97                               I 4 C 0
s Loxodonta_africana.GL010040.1                          20590932 2 -  62548349 AG
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11085552 2 +  39895028 AG
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             18958 2 +     74745 AG
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12705414 2 +  12821369 AG
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                1059 2 -      3136 AG
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           45876 2 +     63263 AG
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                  579 2 -      2568 AG
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 1165 2 -      7381 AG
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  44383 2 -     79256 AG
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196034491 2 + 196197964 AG
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11444658 2 +  11645122 AG
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   3330 2 -     46448 AG
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                1002 2 -     13212 AG
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 14682 2 -     55006 AG
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43839800 2 +  43892939 AG
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               15969 2 -     24607 AG
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               3335 2 -     27140 AG
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                700419 2 +    802869 AG
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43436377 2 -  43563597 AG
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4449203 2 -   4543643 AG
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            144918 2 +    252755 ag
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             34993 2 +     58827 ag
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36872605 2 +  64221397 gc
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       63218 1 -    234502 A-
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_146202             793 2 -      1999 AG
i Mellivora_capensis.MelCap_flattened_line_146202       C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               11316 1 +     15977 -G
i Meriones_unguiculatus.MerUng_scaffold_52233           I 677 C 0
s Mesocricetus_auratus.KB708139.1                         1045579 1 -  26018355 -A
i Mesocricetus_auratus.KB708139.1                       I 5 C 0
s Microcebus_murinus.CM007691.1                          16509091 2 +  47401472 AG
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  30500 2 -     48017 CA
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               21489 2 -     32043 AG
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22818689 1 -  98408828 -G
i Microtus_ochrogaster.CM001673.1                       I 5 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8208463 2 +  10048721 aa
i Miniopterus_natalensis.LDJU01000022.1                 I 223 I 17
s Miniopterus_schreibersii.MinSch_scaffold_24116            33119 2 +     45743 aa
i Miniopterus_schreibersii.MinSch_scaffold_24116        I 207 I 17
s Miopithecus_ogouensis.k141_2935907                          930 2 +     29742 AG
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         9708 2 -    104932 AG
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     4481 2 +      8497 AC
i Mirza_zaza.k141_226143                                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                159997 2 +    265003 AG
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  143097 2 -    168139 AG
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          18126 2 -    100666 GA
i Murina_feae.MurFea_scaffold_2254                      I 250 I 245
s Mus_caroli.LT608236.1                                  70765185 1 +  92629107 -G
i Mus_caroli.LT608236.1                                 I 5 C 0
s Mus_musculus.chr16                                     75488222 1 +  98207768 -g
i Mus_musculus.chr16                                    I 5 C 0
s Mus_pahari.LT608305.1                                  67554464 1 +  89017189 -g
i Mus_pahari.LT608305.1                                 I 5 C 0
s Mus_spretus.CM004110.1                                 74329401 1 +  97876770 -g
i Mus_spretus.CM004110.1                                I 5 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             10267 2 +     98495 AG
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4422365 2 -  28371801 AG
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     88934 2 -    117718 AA
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               966423 2 +   8389877 ga
i Myotis_brandtii.KE161952.1                            I 222 I 250
s Myotis_davidii.KB114863.1                               5018098 2 +   6462685 ga
i Myotis_davidii.KB114863.1                             I 208 I 251
s Myotis_lucifugus.GL429887.1                             3464009 2 -   3747815 GA
i Myotis_lucifugus.GL429887.1                           I 222 I 244
s Myotis_myotis.MyoMyo_scaffold_6123                         9225 2 +     66751 ga
i Myotis_myotis.MyoMyo_scaffold_6123                    I 244 I 243
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3872 2 -      8794 AG
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        I 3 C 0
s Nannospalax_galili.KL201303.1                            117048 2 +    362372 AG
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               7432 2 +     48152 AG
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4483100 2 -  14209539 AG
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  48102 2 +     94413 AG
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_302224                             896 2 +      1516 AG
i Nomascus_annamensis.k141_302224                       C 0 C 0
s Nomascus_concolor.k141_226614                               149 2 -      5092 AG
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_642452                             932 2 +      2851 AG
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_a.k141_595747                                  1570 2 +      4512 AG
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                28545 2 +   3668941 AG
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65566033 2 -  95554990 AG
i Nycticebus_bengalensis.LG16                           I 4 C 0
s Nycticebus_coucang.k141_2051882                            2762 2 +      6470 AG
i Nycticebus_coucang.k141_2051882                       I 4 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65668371 2 +  89412551 AG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     I 4 C 0
s Ochotona_princeps.JH802095.1                            4994894 2 -  23139505 AG
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3684473 2 +  10294119 AA
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             677745 2 -   3126709 AG
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  123946 1 +    145789 -G
i Ondatra_zibethicus.OndZib_scaffold_6821               I 5 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  35718 1 +     62360 -G
i Onychomys_torridus.OnyTor_scaffold_12578              I 5 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              43250 2 -     66828 AG
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141874513 2 + 163896628 AG
i Oryctolagus_cuniculus.CM000803.1                      I 2 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      305879 2 -    505867 AG
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       37929 2 +     38679 AG
i Otolemur_crassicaudatus.k141_321880                   I 4 C 0
s Otolemur_garnettii.GL873528.1                          18007357 2 -  38779656 AA
i Otolemur_garnettii.GL873528.1                         I 4 C 0
s Pan_paniscus.CM003386.1                               127573581 2 - 205426864 TG
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.KZ622857.1                               326562 2 +    772158 AG
i Pan_troglodytes.KZ622857.1                            I 169 I 87
s Panthera_onca.PanOnc_flattened_line_1615                  32561 2 +    295523 AG
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3636295 2 +  18214204 AG
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5025942 2 -   6340057 AG
i Panthera_tigris.KE721879.1                            C 0 C 0
s Papio_anubis.CM001492.2                               188155168 2 - 188283584 AG
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             3485 2 +      5367 AG
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47512556 2 +  47705337 AG
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 66534 2 -    104429 AG
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    5066 2 +     14967 AG
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                  927 2 -      7628 AG
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113877 2 -    135482 AG
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           3970 2 -     23713 aa
i Perodicticus_ibeanus.k141_117958                      I 4 C 0
s Perodicticus_potto.k141_713187                            23268 2 -     27972 aa
i Perodicticus_potto.k141_713187                        I 4 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      42507 2 -     45160 AC
i Perognathus_longimembris.PerPac_flattened_line_22291  I 3 C 0
s Peromyscus_maniculatus.KI615518.1                       4948904 1 -   8017169 -g
i Peromyscus_maniculatus.KI615518.1                     I 5 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    11136 2 -     36578 TA
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Piliocolobus_badius.k141_1987485                            954 2 -      5908 AG
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       1574 2 -     17985 AG
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                             941 2 +      7694 AG
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26739419 2 +  26888534 AG
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            95837 2 +    112873 AA
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        I 192 I 248
s Pithecia_albicans.k141_991845                             42551 2 -     61926 AG
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        23982 2 +     78826 AG
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              7931 2 -     15800 AG
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        11129 2 -     16101 AG
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          4438 2 +      9673 AG
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13473434 2 -  19735023 AG
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           12340 2 -     31692 AG
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       21776 1 +     44506 A-
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        21988 1 +     67491 A-
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      12227 1 -     98129 A-
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     21827 1 +    147771 A-
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        22082 1 -     23762 A-
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          2548 1 -     55515 A-
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         21901 1 +    152463 A-
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      8661 1 +      8943 A-
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                         11623 1 +    134592 A-
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          22211 1 -     75465 A-
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              186106 2 -    373494 TG
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19806754 2 +  19899266 TG
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               4676 2 -     15069 AG
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              4810 2 +     14865 AG
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                76256 2 +     78963 AT
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6847467 2 +  12164890 AC
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    666689 2 -   2312742 AC
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         2516 2 +     11805 AC
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           41852 2 +     52369 AC
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         34242 2 -     44753 AC
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            16162 2 +     27322 AC
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       15798 2 -     53241 AC
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         38070 2 -     48185 AC
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           32854 1 +     77221 -g
i Psammomys_obesus.NESX01026517.1                       I 665 C 0
s Pteronotus_parnellii.KE867983.1                            2663 2 -     27784 AG
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        244459 2 -    344369 AG
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13244806 2 -  17261082 AG
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             602756 2 -   3946241 AG
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131532524 2 - 161321710 AG
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             28794 2 +     56732 AG
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6805285 2 +   6970761 AG
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             4679 2 +     18040 AG
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rattus_norvegicus.chr11                                13914227 1 +  90463843 -g
i Rattus_norvegicus.chr11                               I 5 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1786616 2 +   2252614 AG
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_1391695                            907 2 -      1866 AG
i Rhinopithecus_bieti.k119_1391695                      C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206376564 2 - 206558726 AG
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44855464 2 -  45163003 AG
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                18096 2 +    109198 AG
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15671639 2 -  43202129 AG
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        3556 2 +     34089 AG
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              3497 2 -     60842 AG
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              3592 2 +     67014 AG
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              3570 2 +     60816 AG
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 3507 2 -     76454 AG
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17340232 2 -  30362882 AG
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         19591 2 -     62485 AG
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   30185 2 -    114521 AG
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        2291 2 +     15331 AG
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       7688 2 +     20762 AG
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         117686 2 +    130994 AG
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           36477 2 +     46263 AG
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     29591 2 +     42640 AG
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        12635 2 +     30600 AG
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   98487 1 -    120886 -G
i Sigmodon_hispidus.SigHis_scaffold_11332               I 5 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            16806 2 +    739146 AG
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2238686 2 +   2842873 GC
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             233210 2 -    276980 AG
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            25763 2 +     62062 AG
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189270689 2 + 218635234 AG
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        13849 2 -  13920577 AG
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               4831 2 -      6213 aa
i Tadarida_brasiliensis.TadBra_scaffold_145589          I 239 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               13547 2 +     45698 AG
i Tamandua_tetradactyla.TamTet_scaffold_26877           I 3 C 0
s Tapirus_indicus.TapInd_scaffold_176                      805544 2 +   1148477 AG
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  56204 2 +     99546 AG
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               25378 2 +     42269 AG
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               58694 2 +     65473 AG
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194006695 2 - 194193292 AG
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             38202 2 -     47444 AA
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  4404 2 +      6782 AG
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  134673 2 -    259118 AG
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        25798 2 +     38948 AG
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   19525 2 -     32910 AG
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                       912 2 -     12939 AG
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                        847 2 -     14244 AG
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           42245 2 -     54611 AG
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_878600                        1075 2 +      1165 AG
i Trachypithecus_germaini.k141_878600                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     2223 2 -     15592 AG
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                           880 2 +     14371 AG
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  50632 2 +     51589 AG
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       13813 2 +     14732 AG
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       4285 2 -     28054 AG
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44659085 2 -  44834318 AG
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       1388 2 +     13828 AG
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Trichechus_manatus.JH594618.1                          16081394 2 +  31416278 AG
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2791695 2 -   3938065 AG
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    3963 2 +     13056 AG
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_139357                   710 2 +      2103 AA
i Uropsilus_gracilis.UroGra_scaffold_139357             C 0 C 0
s Ursus_maritimus.KK498671.1                              6513017 2 +  28682327 AG
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  4171 2 -     20643 AC
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             23712 2 -     33872 AC
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1523484 2 -   2331223 GG
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                135952 2 -    281493 AG
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       125787 2 -    134049 AC
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        212480 2 -    227762 AG
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
e Eptesicus_fuscus.JH977687.1                             4702569 441 +   6522550 I
e Sorex_araneus.JH798170.1                               17749445 0 -  27805282 C
e Dinomys_branickii.DinBra_scaffold_1996                   156356 54 +    228994 I
e Ziphius_cavirostris.ZipCav_flattened_line_127025           5748 1 -      8775 I
e Tursiops_truncatus.MRVK01000923.1                      69312251 1 -  96451834 I
e Tragulus_javanicus.TraJav_scaffold_14717                   4004 0 +     90398 C
e Saiga_tatarica.SaiTat_scaffold_82192                       6416 1 +     12214 I
e Rangifer_tarandus.RanTarSib_scaffold_24239                14614 1 +     68503 I
e Platanista_gangetica.PlaMin_flattened_line_72990           4219 1 +     21690 I
e Phocoena_phocoena.PhoPho_flattened_line_11948            120151 1 -    122454 I
e Pantholops_hodgsonii.KE114631.1                         1064960 1 -   1292953 I
e Ovis_canadensis.OviCan_scaffold_6251                      77313 1 +    140051 I
e Ovis_aries.CM001582.2                                 134076099 1 - 275406953 I
e Orcinus_orca.KB316965.1                                 7223534 1 -   7562323 I
e Okapia_johnstoni.LVCL01S0017931.1                         35833 1 +     78940 I
e Odocoileus_virginianus.KZ101650.1                       1078537 1 +   1425656 I
e Neophocaena_asiaeorientalis.KZ688543.1                  3949850 1 -   4490290 I
e Moschus_moschiferus.MosMos_scaffold_146101                 3409 1 -      4346 I
e Monodon_monoceros.MonMon_M_scaffold_5598                 145237 1 +    154973 I
e Lipotes_vexillifer.KE558548.1                            134802 1 +   3060487 I
e Kogia_breviceps.KogBre_flattened_line_35920               22469 1 +     37189 I
e Inia_geoffrensis.IniGeo_flattened_line_66725               7637 1 +     17520 I
e Hippopotamus_amphibius.HipAmp_scaffold_1308              145884 1 +    277961 I
e Hemitragus_hylocrius.HemHyl_scaffold_16669                26305 1 -     91191 I
e Giraffa_tippelskirchi.LVKQ01S012154.1                    180107 1 -    189561 I
e Eubalaena_japonica.EubJap_flattened_line_7756             60309 1 +     89355 I
e Eschrichtius_robustus.EscRob_flattened_line_685          313855 1 +    330699 I
e Elephantulus_edwardii.JH947210.1                        7804622 10712 +  15467074 I
e Elaphurus_davidianus.JRFZ01086400.1                     1490307 1 +   1727528 I
e Delphinapterus_leucas.KZ290064.1                       80035649 1 -  96802777 I
e Crocidura_indochinensis.CroInd_scaffold_38409             18487 0 -     19186 C
e Capra_hircus.CM004562.1                               135705261 1 - 157403528 I
e Capra_aegagrus.CM003214.1                              21324034 1 + 157394656 I
e Bubalus_bubalis.KI419065.1                              1229778 1 -   1914593 I
e Bos_taurus.CM000177.6                                 136294023 1 - 158972876 I
e Bos_mutus.JH883513.1                                     570664 1 -    998990 I
e Bos_indicus.CM003021.1                                138138290 1 - 161108492 I
e Bison_bison.KN264915.1                                  6558051 1 +   6870073 I
e Beatragus_hunteri.BeaHun_scaffold_21644                   42020 1 -     72089 I
e Balaenoptera_bonaerensis.DF502048.1                        4202 1 -     13118 I
e Balaenoptera_acutorostrata.KI537095.1                  26378970 1 +  51448160 I
e Antilocapra_americana.AntAmePen_scaffold_42841            29539 1 +     33004 I
e Ammotragus_lervia.NIVO01013474.1                        3518958 1 +   4113121 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     14107 296 -     20485 I
e Hylobates_pileatus_a.tarseq_592                             33311 5 -     60944 I
e Nomascus_siki_b.tarseq_80                             24175 0 -  18771707 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               10838 1 +    209709 T
s Acinonyx_jubatus.LLWD01000356.1                         2032185 1 +   3721120 T
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    111190 1 -    189883 T
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10655532 1 +  23371972 T
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7092457 1 -  16596857 T
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   11861 1 -     22067 T
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_3103728                   1439 1 +      1665 T
i Allenopithecus_nigroviridis.k141_3103728              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                          915 1 -     29318 T
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_21674                           1132 1 -      1421 T
i Allochrocebus_preussi.k141_21674                      C 0 C 0
s Allochrocebus_solatus.k141_371672                           809 1 -     80423 T
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             9102 1 -     18050 T
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                 10192 1 -     11521 T
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              9779 1 -     21359 T
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_298055                                 1075 1 +      1823 T
i Alouatta_juara.k141_298055                            C 0 C 0
s Alouatta_macconnelli.k141_1331706                          9075 1 -     10438 T
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            5731 1 +      7047 T
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             9011 1 +     10410 T
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            2821 1 -      4927 T
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             5750 1 +      6429 T
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      389108 1 -    631301 T
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Aotus_azarae.k141_3170768                                 61459 1 +     78111 T
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            4400 1 +     22701 T
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5748357 1 +   9889416 T
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             4942 1 -    104377 T
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               4948 1 +     23246 T
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     2616 1 +      5067 T
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      16745 1 +     17483 t
i Arctocebus_calabarensis.k141_1161114                  C 0 I 385
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 7509 1 -     29036 T
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9538207 1 +  39197703 T
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             59478 1 +     85812 T
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                10490 1 +     89302 T
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             14995 1 -     58268 T
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             62986 1 +    119057 T
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               4955 1 -     25888 T
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 5589 1 -     16375 C
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              1909 1 +      2719 C
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Cacajao_ayresi.k141_724503                               112848 1 -    171031 T
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 11876 1 +    125063 T
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                13921 1 -    216513 T
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        6461 1 -    134917 T
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3218379 1 -   8989139 T
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           396084 1 -  15254737 T
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2971817 1 +   6889770 T
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11516908 1 +  39901454 T
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   11926 1 +     87036 T
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11263569 1 -  35597290 T
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11086098 1 +  39895921 T
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16453122 1 -  44759192 T
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capromys_pilorides.CapPil_scaffold_979108                   871 1 -      1248 T
i Capromys_pilorides.CapPil_scaffold_979108             C 0 C 0
s Carlito_syrichta.NW_007248099.1                          307896 1 +    345090 T
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               58306 1 +     67245 T
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   29560 1 +     33760 T
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   157594 1 -    276539 T
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15785504 1 -  24422027 N
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15797438 1 -  24440124 c
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       175629 1 +    436027 C
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18889691 1 -  29618158 T
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 7235 1 -     26817 T
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                11475 1 +     25043 T
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         6929 1 +     21754 T
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4362694 1 +   7569818 T
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         2446 1 -      9338 T
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6554131 1 +   6739814 T
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      25608 1 +     60454 T
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                           813 1 -     21101 T
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         58123 1 -    107033 T
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        1015 1 -     17608 T
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          28510 1 +     30494 T
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          57356 1 -     59240 T
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          1057 1 +     16677 T
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           23215 1 +     35983 T
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11989743 1 +  12117833 T
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46476501 1 +  46592721 T
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      40052 1 -     45581 T
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       1058 1 +     35577 T
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                         834 1 -     25661 T
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                         812 1 -     17744 T
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        20421 1 +     37128 T
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           1638 1 -      6963 T
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           57883 1 -     68416 T
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            6926 1 +     13308 T
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             4491 1 -     18223 T
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             21514 1 +     25473 C
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           40549 1 +     57117 T
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          45228 1 +     54541 T
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15960649 1 +  43084221 t
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         70050 1 +    196370 T
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          14230 1 +     40510 T
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15137975 1 -  15256731 T
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      33022 1 -     53260 T
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101143585 1 + 101219884 T
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                15302 1 -     21363 T
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           760613 1 +    964067 T
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10885351 1 +  10971483 T
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147663515 1 + 156195979 T
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            15499 1 +     23629 T
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60611444 1 +  78930452 T
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         38430 1 -     40477 T
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 277156 1 -    399297 T
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53027842 1 +  72327488 T
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             18487 1 -     19186 T
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            50200 1 -     70449 T
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  207061 1 -    956709 T
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 29633 1 -     67205 G
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                16657 1 +     26546 T
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             57749 1 -    236241 T
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          182474 1 -   6883506 t
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16843736 1 +  31942871 T
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18697615 1 -  18957592 T
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 321341 1 +    993696 T
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   1993 1 +    151128 T
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dipodomys_ordii.KN672545.1                              3655047 1 +   4240102 T
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 26683 1 +     28912 T
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                34995 1 -     73477 T
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22994089 1 -  44670279 T
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 11007 1 +     24177 T
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        238400 1 -    369425 T
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           5510 1 -      7838 t
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85869985 1 +  99434291 T
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4703010 1 +   6522550 T
i Eptesicus_fuscus.JH977687.1                           I 441 C 0
s Erinaceus_europaeus.JH835290.1                         11531312 1 +  16010500 T
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48770155 1 -  48907691 T
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eulemur_albifrons.k141_715837                              3927 1 +     13586 T
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               3864 1 -      6809 T
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            10338 1 +     36558 T
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             6656 1 +     60246 T
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                10135 1 +    109717 T
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               14518 1 +     16540 T
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                14791 1 +     27497 T
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           17248 1 +     26808 T
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                31983 1 +     46535 T
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              14705 1 -     29447 T
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129891161 1 - 159252932 T
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129278233 1 - 158578461 T
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 19368 1 +     52776 T
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13891599 1 -  19261668 t
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     209835 1 -    847004 T
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           12214 1 -     43889 T
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           9283 1 +     27357 T
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               155177 1 +    324696 T
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           11767 1 -     18683 T
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               4223 1 -     14630 T
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119651322 1 - 195582420 T
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   76497 1 +    118900 T
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                          728 1 +     10286 T
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_1254239                            8904 1 +      9690 T
i Hapalemur_gilberti.k141_1254239                       C 0 C 0
s Hapalemur_griseus.k141_1387522                             4533 1 +     56096 T
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        27783 1 -     42470 T
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        44407 1 -     54384 T
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              15408 1 +     53719 T
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2549987 1 +  31725842 t
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               56394 1 +     73687 T
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      277212 1 -    477199 T
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              6371 1 -      9143 T
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      3623 1 -   7690867 T
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 14503 1 -     67322 T
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           17875 1 -    119109 T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              4049 1 +      5897 T
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_624065                                913 1 +      2112 T
i Hylobates_agilis.k141_624065                          C 0 C 0
s Hylobates_klossii.k141_466549                             10489 1 +     11537 T
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14623594 1 -  25970782 G
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                             850 1 -      2977 T
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     5049 1 +     22540 T
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7124768 1 +  13083262 T
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_4418183                                    351 1 -      1457 T
i Indri_indri.k141_4418183                              C 0 C 0
s Jaculus_jaculus.JH725517.1                              8564592 1 +  11848649 T
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Lagothrix_lagothricha.k141_12968                          49071 1 -    147782 T
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   112857 1 -    115756 T
i Lasiurus_borealis.LasBor_scaffold_5102                I 247 C 0
s Lemur_catta.scaffold_1                                258406088 1 - 285822530 T
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        22851 1 +     39228 T
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            52226 1 +     63517 T
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        77476 1 +    116806 T
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     30490 1 -     33031 T
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3084202 1 -   3498232 T
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    11856 1 +     22452 T
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lophocebus_aterrimus.ctg55                             19247220 1 +  19376315 T
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            9599 1 +     84689 T
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3777348 1 +   6799190 T
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20590934 1 -  62548349 T
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11085554 1 +  39895028 T
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             18960 1 +     74745 T
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12705416 1 +  12821369 T
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                1061 1 -      3136 T
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           45878 1 +     63263 T
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                  581 1 -      2568 T
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 1167 1 -      7381 T
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  44385 1 -     79256 T
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196034493 1 + 196197964 T
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11444660 1 +  11645122 T
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   3332 1 -     46448 T
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                1004 1 -     13212 T
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 14684 1 -     55006 T
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43839802 1 +  43892939 T
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               15971 1 -     24607 T
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               3337 1 -     27140 T
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                700421 1 +    802869 T
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43436379 1 -  43563597 T
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4449205 1 -   4543643 T
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            144920 1 +    252755 t
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             34995 1 +     58827 t
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36872607 1 +  64221397 t
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       63219 1 -    234502 T
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_146202             795 1 -      1999 T
i Mellivora_capensis.MelCap_flattened_line_146202       C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               11317 1 +     15977 T
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1045580 1 -  26018355 T
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Microcebus_murinus.CM007691.1                          16509093 1 +  47401472 C
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  30502 1 -     48017 T
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               21491 1 -     32043 T
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22818690 1 -  98408828 T
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8208482 1 +  10048721 T
i Miniopterus_natalensis.LDJU01000022.1                 I 17 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            33138 1 +     45743 T
i Miniopterus_schreibersii.MinSch_scaffold_24116        I 17 C 0
s Miopithecus_ogouensis.k141_2935907                          932 1 +     29742 T
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         9710 1 -    104932 T
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     4483 1 +      8497 C
i Mirza_zaza.k141_226143                                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                159999 1 +    265003 T
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  143099 1 -    168139 T
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          18373 1 -    100666 T
i Murina_feae.MurFea_scaffold_2254                      I 245 C 0
s Mus_caroli.LT608236.1                                  70765186 1 +  92629107 T
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75488223 1 +  98207768 t
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67554465 1 +  89017189 t
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74329402 1 +  97876770 t
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             10269 1 +     98495 T
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4422367 1 -  28371801 T
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     88936 1 -    117718 T
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               966675 1 +   8389877 T
i Myotis_brandtii.KE161952.1                            I 250 C 0
s Myotis_davidii.KB114863.1                               5018351 1 +   6462685 T
i Myotis_davidii.KB114863.1                             I 251 C 0
s Myotis_lucifugus.GL429887.1                             3464255 1 -   3747815 T
i Myotis_lucifugus.GL429887.1                           I 244 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         9470 1 +     66751 T
i Myotis_myotis.MyoMyo_scaffold_6123                    I 243 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3874 1 -      8794 T
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            117050 1 +    362372 C
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               7434 1 +     48152 T
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4483102 1 -  14209539 T
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  48104 1 +     94413 T
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_302224                             898 1 +      1516 T
i Nomascus_annamensis.k141_302224                       C 0 C 0
s Nomascus_concolor.k141_226614                               151 1 -      5092 T
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_642452                             934 1 +      2851 T
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_a.k141_595747                                  1572 1 +      4512 T
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                28547 1 +   3668941 T
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65566035 1 -  95554990 T
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            2764 1 +      6470 T
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65668373 1 +  89412551 T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4994896 1 -  23139505 T
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3684475 1 +  10294119 G
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             677747 1 -   3126709 C
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  123947 1 +    145789 T
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  35719 1 +     62360 T
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              43252 1 -     66828 T
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141874515 1 + 163896628 T
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      305881 1 -    505867 T
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       37931 1 +     38679 T
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18007359 1 -  38779656 T
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Pan_paniscus.CM003386.1                               127573583 1 - 205426864 T
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120150736 1 - 196562556 T
i Pan_troglodytes.CM009241.2                            I 2 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  32563 1 +    295523 T
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3636297 1 +  18214204 T
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5025944 1 -   6340057 T
i Panthera_tigris.KE721879.1                            C 0 C 0
s Papio_anubis.CM001492.2                               188155170 1 - 188283584 T
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             3487 1 +      5367 T
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47512558 1 +  47705337 T
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 66536 1 -    104429 T
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    5068 1 +     14967 T
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                  929 1 -      7628 T
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113879 1 -    135482 T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           3972 1 -     23713 t
i Perodicticus_ibeanus.k141_117958                      C 0 I 376
s Perodicticus_potto.k141_713187                            23270 1 -     27972 t
i Perodicticus_potto.k141_713187                        C 0 I 386
s Perognathus_longimembris.PerPac_flattened_line_22291      42509 1 -     45160 T
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4948905 1 -   8017169 t
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    11138 1 -     36578 T
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Piliocolobus_badius.k141_1987485                            956 1 -      5908 T
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       1576 1 -     17985 T
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                             943 1 +      7694 T
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26739421 1 +  26888534 T
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            96087 1 +    112873 T
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        I 248 C 0
s Pithecia_albicans.k141_991845                             42553 1 -     61926 T
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        23984 1 +     78826 T
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              7933 1 -     15800 T
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        11131 1 -     16101 T
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          4440 1 +      9673 T
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13473436 1 -  19735023 T
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           12342 1 -     31692 T
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       21777 1 +     44506 T
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        21989 1 +     67491 T
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      12228 1 -     98129 T
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     21828 1 +    147771 T
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        22083 1 -     23762 T
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          2549 1 -     55515 T
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         21902 1 +    152463 T
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      8662 1 +      8943 T
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                         11624 1 +    134592 T
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          22212 1 -     75465 T
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              186108 1 -    373494 T
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19806756 1 +  19899266 T
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               4678 1 -     15069 T
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              4812 1 +     14865 T
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                76258 1 +     78963 T
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6847469 1 +  12164890 T
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    666691 1 -   2312742 C
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         2518 1 +     11805 C
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           41854 1 +     52369 C
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         34244 1 -     44753 C
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            16164 1 +     27322 C
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       15800 1 -     53241 C
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         38072 1 -     48185 C
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           32855 1 +     77221 t
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            2665 1 -     27784 T
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        244461 1 -    344369 T
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13244808 1 -  17261082 T
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             602758 1 -   3946241 T
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131532526 1 - 161321710 T
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             28796 1 +     56732 T
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6805287 1 +   6970761 T
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             4681 1 +     18040 T
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rattus_norvegicus.chr11                                13914228 1 +  90463843 t
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1786618 1 +   2252614 T
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_1391695                            909 1 -      1866 T
i Rhinopithecus_bieti.k119_1391695                      C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206376566 1 - 206558726 T
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44855466 1 -  45163003 T
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                18098 1 +    109198 T
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15671641 1 -  43202129 t
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        3558 1 +     34089 T
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              3499 1 -     60842 T
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              3594 1 +     67014 T
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              3572 1 +     60816 T
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 3509 1 -     76454 T
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17340234 1 -  30362882 T
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         19593 1 -     62485 T
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   30187 1 -    114521 T
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        2293 1 +     15331 T
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       7690 1 +     20762 T
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         117688 1 +    130994 T
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           36479 1 +     46263 T
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     29593 1 +     42640 T
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        12637 1 +     30600 T
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   98488 1 -    120886 T
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            16808 1 +    739146 C
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17749445 1 -  27805282 T
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2238688 1 +   2842873 T
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             233212 1 -    276980 T
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            25765 1 +     62062 T
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189270691 1 + 218635234 A
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        13851 1 -  13920577 T
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               4833 1 -      6213 T
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               13549 1 +     45698 T
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      805546 1 +   1148477 T
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  56206 1 +     99546 T
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               25380 1 +     42269 T
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               58696 1 +     65473 T
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194006697 1 - 194193292 T
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             38204 1 -     47444 T
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  4406 1 +      6782 T
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  134675 1 -    259118 C
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        25800 1 +     38948 T
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   19527 1 -     32910 T
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                       914 1 -     12939 T
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                        849 1 -     14244 T
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           42247 1 -     54611 T
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_878600                        1077 1 +      1165 T
i Trachypithecus_germaini.k141_878600                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     2225 1 -     15592 T
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                           882 1 +     14371 T
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  50634 1 +     51589 T
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       13815 1 +     14732 T
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       4287 1 -     28054 T
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44659087 1 -  44834318 T
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       1390 1 +     13828 T
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Trichechus_manatus.JH594618.1                          16081396 1 +  31416278 T
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2791697 1 -   3938065 T
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    3965 1 +     13056 T
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_139357                   712 1 +      2103 C
i Uropsilus_gracilis.UroGra_scaffold_139357             C 0 C 0
s Ursus_maritimus.KK498671.1                              6513019 1 +  28682327 T
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  4173 1 -     20643 T
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             23714 1 -     33872 T
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1523486 1 -   2331223 T
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                135954 1 -    281493 T
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       125789 1 -    134049 T
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        212482 1 -    227762 C
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
e Dinomys_branickii.DinBra_scaffold_1996                   156356 54 +    228994 I
e Ziphius_cavirostris.ZipCav_flattened_line_127025           5748 1 -      8775 I
e Tursiops_truncatus.MRVK01000923.1                      69312251 1 -  96451834 I
e Tragulus_javanicus.TraJav_scaffold_14717                   4004 0 +     90398 C
e Saiga_tatarica.SaiTat_scaffold_82192                       6416 1 +     12214 I
e Rangifer_tarandus.RanTarSib_scaffold_24239                14614 1 +     68503 I
e Platanista_gangetica.PlaMin_flattened_line_72990           4219 1 +     21690 I
e Phocoena_phocoena.PhoPho_flattened_line_11948            120151 1 -    122454 I
e Pantholops_hodgsonii.KE114631.1                         1064960 1 -   1292953 I
e Ovis_canadensis.OviCan_scaffold_6251                      77313 1 +    140051 I
e Ovis_aries.CM001582.2                                 134076099 1 - 275406953 I
e Orcinus_orca.KB316965.1                                 7223534 1 -   7562323 I
e Okapia_johnstoni.LVCL01S0017931.1                         35833 1 +     78940 I
e Odocoileus_virginianus.KZ101650.1                       1078537 1 +   1425656 I
e Neophocaena_asiaeorientalis.KZ688543.1                  3949850 1 -   4490290 I
e Moschus_moschiferus.MosMos_scaffold_146101                 3409 1 -      4346 I
e Monodon_monoceros.MonMon_M_scaffold_5598                 145237 1 +    154973 I
e Lipotes_vexillifer.KE558548.1                            134802 1 +   3060487 I
e Kogia_breviceps.KogBre_flattened_line_35920               22469 1 +     37189 I
e Inia_geoffrensis.IniGeo_flattened_line_66725               7637 1 +     17520 I
e Hippopotamus_amphibius.HipAmp_scaffold_1308              145884 1 +    277961 I
e Hemitragus_hylocrius.HemHyl_scaffold_16669                26305 1 -     91191 I
e Giraffa_tippelskirchi.LVKQ01S012154.1                    180107 1 -    189561 I
e Eubalaena_japonica.EubJap_flattened_line_7756             60309 1 +     89355 I
e Eschrichtius_robustus.EscRob_flattened_line_685          313855 1 +    330699 I
e Equus_przewalskii.ATBW01073585.1                          11756 0 +     92910 C
e Equus_caballus.CM000402.2                              13350266 0 +  41866177 C
e Equus_asinus.JREZ01000062.1                             5851763 0 -   7175178 C
e Elephantulus_edwardii.JH947210.1                        7804622 10712 +  15467074 I
e Elaphurus_davidianus.JRFZ01086400.1                     1490307 1 +   1727528 I
e Delphinapterus_leucas.KZ290064.1                       80035649 1 -  96802777 I
e Capra_hircus.CM004562.1                               135705261 1 - 157403528 I
e Capra_aegagrus.CM003214.1                              21324034 1 + 157394656 I
e Bubalus_bubalis.KI419065.1                              1229778 1 -   1914593 I
e Bos_taurus.CM000177.6                                 136294023 1 - 158972876 I
e Bos_mutus.JH883513.1                                     570664 1 -    998990 I
e Bos_indicus.CM003021.1                                138138290 1 - 161108492 I
e Bison_bison.KN264915.1                                  6558051 1 +   6870073 I
e Beatragus_hunteri.BeaHun_scaffold_21644                   42020 1 -     72089 I
e Balaenoptera_bonaerensis.DF502048.1                        4202 1 -     13118 I
e Balaenoptera_acutorostrata.KI537095.1                  26378970 1 +  51448160 I
e Antilocapra_americana.AntAmePen_scaffold_42841            29539 1 +     33004 I
e Ammotragus_lervia.NIVO01013474.1                        3518958 1 +   4113121 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     14107 296 -     20485 I
e Hylobates_pileatus_a.tarseq_592                             33311 5 -     60944 I
e Nomascus_siki_b.tarseq_80                             24175 0 -  18771707 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               10839 1 +    209709 A
s Acinonyx_jubatus.LLWD01000356.1                         2032186 1 +   3721120 A
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    111191 1 -    189883 A
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10655533 1 +  23371972 A
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7092458 1 -  16596857 A
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   11862 1 -     22067 A
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_3103728                   1440 1 +      1665 A
i Allenopithecus_nigroviridis.k141_3103728              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                          916 1 -     29318 A
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_21674                           1133 1 -      1421 A
i Allochrocebus_preussi.k141_21674                      C 0 C 0
s Allochrocebus_solatus.k141_371672                           810 1 -     80423 A
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             9103 1 -     18050 A
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                 10193 1 -     11521 A
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              9780 1 -     21359 A
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_298055                                 1076 1 +      1823 A
i Alouatta_juara.k141_298055                            C 0 C 0
s Alouatta_macconnelli.k141_1331706                          9076 1 -     10438 A
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            5732 1 +      7047 A
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             9012 1 +     10410 A
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            2822 1 -      4927 A
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             5751 1 +      6429 A
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      389109 1 -    631301 A
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Aotus_azarae.k141_3170768                                 61460 1 +     78111 A
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            4401 1 +     22701 A
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5748358 1 +   9889416 A
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             4943 1 -    104377 A
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               4949 1 +     23246 A
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     2617 1 +      5067 A
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      17131 1 +     17483 A
i Arctocebus_calabarensis.k141_1161114                  I 385 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 7510 1 -     29036 C
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9538208 1 +  39197703 A
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             59479 1 +     85812 A
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                10491 1 +     89302 A
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             14996 1 -     58268 A
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             62987 1 +    119057 A
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               4956 1 -     25888 A
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 5590 1 -     16375 A
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              1910 1 +      2719 A
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Cacajao_ayresi.k141_724503                               112849 1 -    171031 A
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 11877 1 +    125063 A
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                13922 1 -    216513 A
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        6462 1 -    134917 A
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3218380 1 -   8989139 G
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           396085 1 -  15254737 G
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2971818 1 +   6889770 G
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11516909 1 +  39901454 A
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   11927 1 +     87036 A
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11263570 1 -  35597290 A
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11086099 1 +  39895921 A
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16453123 1 -  44759192 A
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capromys_pilorides.CapPil_scaffold_979108                   872 1 -      1248 A
i Capromys_pilorides.CapPil_scaffold_979108             C 0 C 0
s Carlito_syrichta.NW_007248099.1                          307897 1 +    345090 A
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               58307 1 +     67245 A
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   29561 1 +     33760 A
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   157595 1 -    276539 A
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15785505 1 -  24422027 N
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15797439 1 -  24440124 a
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       175630 1 +    436027 A
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18889692 1 -  29618158 A
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 7236 1 -     26817 A
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                11476 1 +     25043 A
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         6930 1 +     21754 A
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4362695 1 +   7569818 A
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         2447 1 -      9338 A
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6554132 1 +   6739814 A
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      25609 1 +     60454 A
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                           814 1 -     21101 A
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         58124 1 -    107033 A
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        1016 1 -     17608 A
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          28511 1 +     30494 A
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          57357 1 -     59240 A
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          1058 1 +     16677 A
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           23216 1 +     35983 A
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11989744 1 +  12117833 A
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46476502 1 +  46592721 A
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      40053 1 -     45581 A
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       1059 1 +     35577 A
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                         835 1 -     25661 A
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                         813 1 -     17744 A
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        20422 1 +     37128 A
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           1639 1 -      6963 G
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           57884 1 -     68416 A
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            6927 1 +     13308 A
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             4492 1 -     18223 A
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             21515 1 +     25473 A
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           40550 1 +     57117 A
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          45229 1 +     54541 A
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15960650 1 +  43084221 a
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         70051 1 +    196370 A
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          14231 1 +     40510 A
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15137976 1 -  15256731 A
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      33023 1 -     53260 A
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101143586 1 + 101219884 A
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                15303 1 -     21363 G
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           760614 1 +    964067 G
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10885352 1 +  10971483 A
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147663516 1 + 156195979 A
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            15500 1 +     23629 A
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60611445 1 +  78930452 A
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         38431 1 -     40477 A
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 277157 1 -    399297 A
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53027843 1 +  72327488 A
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             18488 1 -     19186 A
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            50201 1 -     70449 A
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  207062 1 -    956709 A
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 29634 1 -     67205 A
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                16658 1 +     26546 A
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             57750 1 -    236241 A
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          182475 1 -   6883506 a
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16843737 1 +  31942871 A
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18697616 1 -  18957592 A
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 321342 1 +    993696 A
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   1994 1 +    151128 A
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dipodomys_ordii.KN672545.1                              3655048 1 +   4240102 A
i Dipodomys_ordii.KN672545.1                            C 0 I 2
s Dipodomys_stephensi.DipSte_scaffold_44365                 26684 1 +     28912 A
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 I 2
s Dolichotis_patagonum.DolPat_scaffold_14102                34996 1 -     73477 A
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22994090 1 -  44670279 G
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 11008 1 +     24177 A
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        238401 1 -    369425 A
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           5511 1 -      7838 a
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85869986 1 +  99434291 A
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4703011 1 +   6522550 C
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11531313 1 +  16010500 A
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48770156 1 -  48907691 A
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eulemur_albifrons.k141_715837                              3928 1 +     13586 A
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               3865 1 -      6809 A
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            10339 1 +     36558 A
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             6657 1 +     60246 A
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                10136 1 +    109717 A
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               14519 1 +     16540 A
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                14792 1 +     27497 A
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           17249 1 +     26808 A
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                31984 1 +     46535 A
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              14706 1 -     29447 A
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129891162 1 - 159252932 A
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129278234 1 - 158578461 A
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 19369 1 +     52776 A
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13891600 1 -  19261668 a
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     209836 1 -    847004 A
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           12215 1 -     43889 A
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           9284 1 +     27357 A
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               155178 1 +    324696 A
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           11768 1 -     18683 A
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               4224 1 -     14630 A
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119651323 1 - 195582420 A
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   76498 1 +    118900 A
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                          729 1 +     10286 A
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_1254239                            8905 1 +      9690 A
i Hapalemur_gilberti.k141_1254239                       C 0 C 0
s Hapalemur_griseus.k141_1387522                             4534 1 +     56096 A
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        27784 1 -     42470 A
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        44408 1 -     54384 A
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              15409 1 +     53719 A
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2549988 1 +  31725842 a
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               56395 1 +     73687 G
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      277213 1 -    477199 A
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              6372 1 -      9143 A
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      3624 1 -   7690867 A
i Hoolock_leuconedys.ctg79                                 C 0 I 7
s Hyaena_hyaena.HyaHya_flattened_line_20729                 14504 1 -     67322 A
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           17876 1 -    119109 C
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              4050 1 +      5897 A
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_624065                                914 1 +      2112 T
i Hylobates_agilis.k141_624065                          C 0 C 0
s Hylobates_klossii.k141_466549                             10490 1 +     11537 A
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14623595 1 -  25970782 A
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                             851 1 -      2977 A
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     5050 1 +     22540 A
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7124769 1 +  13083262 A
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_4418183                                    352 1 -      1457 A
i Indri_indri.k141_4418183                              C 0 C 0
s Jaculus_jaculus.JH725517.1                              8564593 1 +  11848649 A
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Lagothrix_lagothricha.k141_12968                          49072 1 -    147782 A
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   112858 1 -    115756 C
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258406089 1 - 285822530 A
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        22852 1 +     39228 A
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            52227 1 +     63517 A
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        77477 1 +    116806 A
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     30491 1 -     33031 A
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3084203 1 -   3498232 A
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    11857 1 +     22452 A
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lophocebus_aterrimus.ctg55                             19247221 1 +  19376315 A
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            9600 1 +     84689 A
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3777349 1 +   6799190 A
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20590935 1 -  62548349 G
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11085555 1 +  39895028 A
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             18961 1 +     74745 A
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12705417 1 +  12821369 A
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                1062 1 -      3136 A
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           45879 1 +     63263 A
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                  582 1 -      2568 A
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 1168 1 -      7381 A
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  44386 1 -     79256 A
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196034494 1 + 196197964 A
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11444661 1 +  11645122 A
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   3333 1 -     46448 A
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                1005 1 -     13212 A
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 14685 1 -     55006 A
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43839803 1 +  43892939 A
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               15972 1 -     24607 A
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               3338 1 -     27140 A
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                700422 1 +    802869 A
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43436380 1 -  43563597 A
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4449206 1 -   4543643 A
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            144921 1 +    252755 a
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             34996 1 +     58827 a
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36872608 1 +  64221397 a
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       63220 1 -    234502 A
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_146202             796 1 -      1999 A
i Mellivora_capensis.MelCap_flattened_line_146202       C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               11318 1 +     15977 A
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1045581 1 -  26018355 A
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Microcebus_murinus.CM007691.1                          16509094 1 +  47401472 A
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  30503 1 -     48017 G
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               21492 1 -     32043 A
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22818691 1 -  98408828 A
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8208483 1 +  10048721 A
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            33139 1 +     45743 A
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                          933 1 +     29742 A
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         9711 1 -    104932 A
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     4484 1 +      8497 A
i Mirza_zaza.k141_226143                                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                160000 1 +    265003 A
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  143100 1 -    168139 A
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          18374 1 -    100666 C
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70765187 1 +  92629107 A
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75488224 1 +  98207768 a
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67554466 1 +  89017189 a
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74329403 1 +  97876770 a
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             10270 1 +     98495 A
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 I 209
s Mustela_putorius.JH417978.1                             4422368 1 -  28371801 A
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     88937 1 -    117718 A
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               966676 1 +   8389877 C
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5018352 1 +   6462685 C
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3464256 1 -   3747815 C
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         9471 1 +     66751 C
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3875 1 -      8794 G
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            117051 1 +    362372 A
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               7435 1 +     48152 A
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4483103 1 -  14209539 A
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  48105 1 +     94413 G
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_302224                             899 1 +      1516 A
i Nomascus_annamensis.k141_302224                       C 0 I 7
s Nomascus_concolor.k141_226614                               152 1 -      5092 A
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_642452                             935 1 +      2851 A
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_a.k141_595747                                  1573 1 +      4512 A
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                28548 1 +   3668941 A
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65566036 1 -  95554990 A
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            2765 1 +      6470 A
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65668374 1 +  89412551 A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4994897 1 -  23139505 A
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3684476 1 +  10294119 T
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             677748 1 -   3126709 A
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  123948 1 +    145789 A
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  35720 1 +     62360 C
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              43253 1 -     66828 G
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141874516 1 + 163896628 A
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      305882 1 -    505867 A
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       37932 1 +     38679 A
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18007360 1 -  38779656 A
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Pan_paniscus.CM003386.1                               127573584 1 - 205426864 A
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120150737 1 - 196562556 A
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  32564 1 +    295523 A
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3636298 1 +  18214204 A
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5025945 1 -   6340057 A
i Panthera_tigris.KE721879.1                            C 0 C 0
s Papio_anubis.CM001492.2                               188155171 1 - 188283584 A
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             3488 1 +      5367 A
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47512559 1 +  47705337 A
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 66537 1 -    104429 A
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    5069 1 +     14967 A
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                  930 1 -      7628 A
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113880 1 -    135482 A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           4349 1 -     23713 A
i Perodicticus_ibeanus.k141_117958                      I 376 C 0
s Perodicticus_potto.k141_713187                            23657 1 -     27972 A
i Perodicticus_potto.k141_713187                        I 386 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      42510 1 -     45160 A
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4948906 1 -   8017169 c
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    11139 1 -     36578 A
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Piliocolobus_badius.k141_1987485                            957 1 -      5908 A
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       1577 1 -     17985 A
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                             944 1 +      7694 A
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26739422 1 +  26888534 A
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            96088 1 +    112873 C
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             42554 1 -     61926 A
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        23985 1 +     78826 A
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              7934 1 -     15800 A
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        11132 1 -     16101 A
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          4441 1 +      9673 A
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13473437 1 -  19735023 A
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           12343 1 -     31692 A
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       21778 1 +     44506 A
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        21990 1 +     67491 A
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      12229 1 -     98129 A
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     21829 1 +    147771 A
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        22084 1 -     23762 A
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          2550 1 -     55515 A
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         21903 1 +    152463 A
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      8663 1 +      8943 A
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                         11625 1 +    134592 A
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          22213 1 -     75465 A
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              186109 1 -    373494 A
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19806757 1 +  19899266 A
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               4679 1 -     15069 G
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              4813 1 +     14865 G
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                76259 1 +     78963 G
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6847470 1 +  12164890 A
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    666692 1 -   2312742 A
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         2519 1 +     11805 A
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           41855 1 +     52369 A
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         34245 1 -     44753 A
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            16165 1 +     27322 A
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       15801 1 -     53241 A
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         38073 1 -     48185 A
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           32856 1 +     77221 a
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            2666 1 -     27784 A
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        244462 1 -    344369 A
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13244809 1 -  17261082 A
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             602759 1 -   3946241 A
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131532527 1 - 161321710 A
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             28797 1 +     56732 A
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6805288 1 +   6970761 A
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             4682 1 +     18040 A
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rattus_norvegicus.chr11                                13914229 1 +  90463843 a
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1786619 1 +   2252614 A
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_1391695                            910 1 -      1866 A
i Rhinopithecus_bieti.k119_1391695                      C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206376567 1 - 206558726 A
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44855467 1 -  45163003 A
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                18099 1 +    109198 A
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15671642 1 -  43202129 a
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        3559 1 +     34089 A
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              3500 1 -     60842 A
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              3595 1 +     67014 A
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              3573 1 +     60816 A
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 3510 1 -     76454 A
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17340235 1 -  30362882 A
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         19594 1 -     62485 A
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   30188 1 -    114521 A
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        2294 1 +     15331 A
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       7691 1 +     20762 A
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         117689 1 +    130994 A
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           36480 1 +     46263 A
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     29594 1 +     42640 A
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        12638 1 +     30600 A
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   98489 1 -    120886 A
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            16809 1 +    739146 A
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17749446 1 -  27805282 A
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2238689 1 +   2842873 A
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             233213 1 -    276980 A
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            25766 1 +     62062 A
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189270692 1 + 218635234 A
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        13852 1 -  13920577 A
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               4834 1 -      6213 A
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               13550 1 +     45698 G
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tarsius_lariang.k141_609102                               25381 1 +     42269 A
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               58697 1 +     65473 A
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194006698 1 - 194193292 A
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             38205 1 -     47444 A
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  4407 1 +      6782 G
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  134676 1 -    259118 A
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        25801 1 +     38948 A
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   19528 1 -     32910 A
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                       915 1 -     12939 A
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                        850 1 -     14244 A
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           42248 1 -     54611 A
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_878600                        1078 1 +      1165 A
i Trachypithecus_germaini.k141_878600                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     2226 1 -     15592 A
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                           883 1 +     14371 A
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  50635 1 +     51589 A
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       13816 1 +     14732 A
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       4288 1 -     28054 A
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44659088 1 -  44834318 A
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       1391 1 +     13828 A
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Trichechus_manatus.JH594618.1                          16081397 1 +  31416278 G
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2791698 1 -   3938065 C
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    3966 1 +     13056 A
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_139357                   713 1 +      2103 A
i Uropsilus_gracilis.UroGra_scaffold_139357             C 0 C 0
s Ursus_maritimus.KK498671.1                              6513020 1 +  28682327 A
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  4174 1 -     20643 A
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             23715 1 -     33872 A
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1523487 1 -   2331223 G
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                135955 1 -    281493 A
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       125790 1 -    134049 A
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        212483 1 -    227762 A
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
e Dinomys_branickii.DinBra_scaffold_1996                   156356 54 +    228994 I
e Ziphius_cavirostris.ZipCav_flattened_line_127025           5748 1 -      8775 I
e Tursiops_truncatus.MRVK01000923.1                      69312251 1 -  96451834 I
e Tragulus_javanicus.TraJav_scaffold_14717                   4004 0 +     90398 C
e Tapirus_terrestris.TapTer_scaffold_14939                  56207 0 +     99546 C
e Tapirus_indicus.TapInd_scaffold_176                      805547 0 +   1148477 C
e Saiga_tatarica.SaiTat_scaffold_82192                       6416 1 +     12214 I
e Rangifer_tarandus.RanTarSib_scaffold_24239                14614 1 +     68503 I
e Platanista_gangetica.PlaMin_flattened_line_72990           4219 1 +     21690 I
e Phocoena_phocoena.PhoPho_flattened_line_11948            120151 1 -    122454 I
e Pantholops_hodgsonii.KE114631.1                         1064960 1 -   1292953 I
e Ovis_canadensis.OviCan_scaffold_6251                      77313 1 +    140051 I
e Ovis_aries.CM001582.2                                 134076099 1 - 275406953 I
e Orcinus_orca.KB316965.1                                 7223534 1 -   7562323 I
e Okapia_johnstoni.LVCL01S0017931.1                         35833 1 +     78940 I
e Odocoileus_virginianus.KZ101650.1                       1078537 1 +   1425656 I
e Neophocaena_asiaeorientalis.KZ688543.1                  3949850 1 -   4490290 I
e Moschus_moschiferus.MosMos_scaffold_146101                 3409 1 -      4346 I
e Monodon_monoceros.MonMon_M_scaffold_5598                 145237 1 +    154973 I
e Lipotes_vexillifer.KE558548.1                            134802 1 +   3060487 I
e Kogia_breviceps.KogBre_flattened_line_35920               22469 1 +     37189 I
e Inia_geoffrensis.IniGeo_flattened_line_66725               7637 1 +     17520 I
e Hippopotamus_amphibius.HipAmp_scaffold_1308              145884 1 +    277961 I
e Hemitragus_hylocrius.HemHyl_scaffold_16669                26305 1 -     91191 I
e Giraffa_tippelskirchi.LVKQ01S012154.1                    180107 1 -    189561 I
e Eubalaena_japonica.EubJap_flattened_line_7756             60309 1 +     89355 I
e Eschrichtius_robustus.EscRob_flattened_line_685          313855 1 +    330699 I
e Equus_przewalskii.ATBW01073585.1                          11756 0 +     92910 C
e Equus_caballus.CM000402.2                              13350266 0 +  41866177 C
e Equus_asinus.JREZ01000062.1                             5851763 0 -   7175178 C
e Elephantulus_edwardii.JH947210.1                        7804622 10712 +  15467074 I
e Elaphurus_davidianus.JRFZ01086400.1                     1490307 1 +   1727528 I
e Delphinapterus_leucas.KZ290064.1                       80035649 1 -  96802777 I
e Capra_hircus.CM004562.1                               135705261 1 - 157403528 I
e Capra_aegagrus.CM003214.1                              21324034 1 + 157394656 I
e Bubalus_bubalis.KI419065.1                              1229778 1 -   1914593 I
e Bos_taurus.CM000177.6                                 136294023 1 - 158972876 I
e Bos_mutus.JH883513.1                                     570664 1 -    998990 I
e Bos_indicus.CM003021.1                                138138290 1 - 161108492 I
e Bison_bison.KN264915.1                                  6558051 1 +   6870073 I
e Beatragus_hunteri.BeaHun_scaffold_21644                   42020 1 -     72089 I
e Balaenoptera_bonaerensis.DF502048.1                        4202 1 -     13118 I
e Balaenoptera_acutorostrata.KI537095.1                  26378970 1 +  51448160 I
e Antilocapra_americana.AntAmePen_scaffold_42841            29539 1 +     33004 I
e Ammotragus_lervia.NIVO01013474.1                        3518958 1 +   4113121 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     14107 296 -     20485 I
e Hylobates_pileatus_a.tarseq_592                             33311 5 -     60944 I
e Nomascus_siki_b.tarseq_80                             24175 0 -  18771707 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               10840 6 +    209709 A-TG-CA-A
s Acinonyx_jubatus.LLWD01000356.1                         2032187 7 +   3721120 ATTG-GA-A
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    111192 7 -    189883 ATTC-TA-A
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10655534 7 +  23371972 ATTG-GA-A
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7092459 7 -  16596857 ACTG-GA-A
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   11863 7 -     22067 ATTG-CA-A
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_3103728                   1441 7 +      1665 ACTG-AT-A
i Allenopithecus_nigroviridis.k141_3103728              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                          917 7 -     29318 ACTG-AT-A
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_21674                           1134 7 -      1421 ACTG-AT-A
i Allochrocebus_preussi.k141_21674                      C 0 C 0
s Allochrocebus_solatus.k141_371672                           811 7 -     80423 ACTG-AT-A
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             9104 7 -     18050 ATTG-AA-A
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                 10194 7 -     11521 ATTG-AA-A
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              9781 7 -     21359 ATTG-AA-A
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_298055                                 1077 7 +      1823 ATTG-AA-A
i Alouatta_juara.k141_298055                            C 0 C 0
s Alouatta_macconnelli.k141_1331706                          9077 7 -     10438 ATTG-AA-A
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            5733 7 +      7047 ATTG-AA-A
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             9013 7 +     10410 ATTG-AA-A
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            2823 7 -      4927 ATTG-AA-A
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             5752 7 +      6429 ATTG-AA-A
i Alouatta_seniculus.k141_990213                        C 0 I 16
s Ammotragus_lervia.NIVO01013474.1                        3518959 5 +   4113121 --TG-GA-A
i Ammotragus_lervia.NIVO01013474.1                      I 1 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      389110 7 -    631301 ATTG-TA-A
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            29540 5 +     33004 --TG-GA-A
i Antilocapra_americana.AntAmePen_scaffold_42841        I 1 C 0
s Aotus_azarae.k141_3170768                                 61461 7 +     78111 ATTG-AA-A
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            4402 7 +     22701 ATTG-AA-A
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5748359 7 +   9889416 ATTG-AA-A
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             4944 7 -    104377 ATTG-AA-A
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               4950 7 +     23246 ATTG-AA-A
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     2618 7 +      5067 ATGG-AA-A
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      17132 7 +     17483 ATGG-GA-A
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 7511 7 -     29036 ATTG-GA-A
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9538209 7 +  39197703 ATTG-AA-A
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             59480 7 +     85812 ATTG-AA-A
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                10492 7 +     89302 ATTG-AA-A
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             14997 7 -     58268 ATTG-AA-A
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             62988 7 +    119057 ATTG-AA-A
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               4957 7 -     25888 ATTG-AA-A
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 5591 7 -     16375 GTTG-AC-A
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              1911 7 +      2719 GTTG-AC-A
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26378971 5 +  51448160 --TG-GA-A
i Balaenoptera_acutorostrata.KI537095.1                 I 1 C 0
s Balaenoptera_bonaerensis.DF502048.1                        4203 5 -     13118 --TG-GA-A
i Balaenoptera_bonaerensis.DF502048.1                   I 1 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   42021 5 -     72089 --TG-GA-A
i Beatragus_hunteri.BeaHun_scaffold_21644               I 1 C 0
s Bison_bison.KN264915.1                                  6558052 5 +   6870073 --TG-GA-A
i Bison_bison.KN264915.1                                I 1 C 0
s Bos_indicus.CM003021.1                                138138291 5 - 161108492 --TG-GA-A
i Bos_indicus.CM003021.1                                I 1 C 0
s Bos_mutus.JH883513.1                                     570665 5 -    998990 --TG-GA-A
i Bos_mutus.JH883513.1                                  I 1 C 0
s Bos_taurus.CM000177.6                                 136294024 5 - 158972876 --TG-GA-A
i Bos_taurus.CM000177.6                                 I 1 C 0
s Bubalus_bubalis.KI419065.1                              1229779 5 -   1914593 --TG-GA-A
i Bubalus_bubalis.KI419065.1                            I 1 C 0
s Cacajao_ayresi.k141_724503                               112850 7 -    171031 ATTG-AA-A
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 11878 7 +    125063 ATTG-AA-A
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                13923 7 -    216513 ATTG-AA-A
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        6463 7 -    134917 ATTG-AA-A
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3218381 7 -   8989139 ACTG-GG-A
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           396086 7 -  15254737 ACTG-GG-A
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2971819 7 +   6889770 ACTG-GG-A
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11516910 7 +  39901454 ATTA-GA-A
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   11928 7 +     87036 ATTA-GA-A
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11263571 7 -  35597290 ATTA-GA-A
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11086100 7 +  39895921 ATTA-GA-A
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16453124 7 -  44759192 ATTA-GA-A
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21324035 5 + 157394656 --TG-GA-A
i Capra_aegagrus.CM003214.1                             I 1 C 0
s Capra_hircus.CM004562.1                               135705262 5 - 157403528 --TG-GA-A
i Capra_hircus.CM004562.1                               I 1 C 0
s Capromys_pilorides.CapPil_scaffold_979108                   873 7 -      1248 ATTT-GA-A
i Capromys_pilorides.CapPil_scaffold_979108             C 0 I 18
s Carlito_syrichta.NW_007248099.1                          307898 7 +    345090 ACTG-AA-A
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               58308 7 +     67245 ATTG-GA-A
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   29562 7 +     33760 ATCA-AA-A
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   157596 7 -    276539 GTTG-GA-A
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15785506 7 -  24422027 NNNN-NN-N
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15797440 7 -  24440124 attt-aa-a
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       175631 7 +    436027 ATTT-AA-A
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18889693 7 -  29618158 ATTG-AA-A
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 7237 7 -     26817 ATTG-AA-A
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                11477 7 +     25043 ATTG-AA-A
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         6931 7 +     21754 ACTG-AA-A
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4362696 7 +   7569818 ATTG-GA-A
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         2448 7 -      9338 ATTG-GA-A
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6554133 7 +   6739814 ACTG-AT-A
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      25610 7 +     60454 ACTG-AT-A
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                           815 7 -     21101 ACTG-AT-A
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         58125 7 -    107033 ACTG-AT-A
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        1017 7 -     17608 ACTG-AT-A
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          28512 7 +     30494 ACTG-AT-A
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          57358 7 -     59240 ACTG-AT-A
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          1059 7 +     16677 ACTG-AT-A
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           23217 7 +     35983 ACTG-AT-A
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11989745 7 +  12117833 ACTG-AT-A
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46476503 7 +  46592721 ACTG-AT-A
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      40054 7 -     45581 ACTG-AT-A
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       1060 7 +     35577 ACTG-AT-A
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                         836 7 -     25661 ACTG-AT-A
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                         814 7 -     17744 ACTG-AT-A
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        20423 7 +     37128 ACTG-AT-A
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           1640 7 -      6963 ATAA-AA-A
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           57885 7 -     68416 ATTG-AA-A
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            6928 7 +     13308 ATTG-AA-A
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             4493 7 -     18223 ATTG-AA-A
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             21516 7 +     25473 ATTG-AA-A
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           40551 7 +     57117 ATTG-AA-A
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          45230 7 +     54541 ATTG-AA-A
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15960651 7 +  43084221 attt-aa-a
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         70052 7 +    196370 ATTG-AA-A
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          14232 7 +     40510 ATTG-AA-A
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15137977 7 -  15256731 ACTG-AT-A
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      33024 7 -     53260 ACTG-AT-A
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101143587 7 + 101219884 ACTG-AT-A
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                15304 7 -     21363 ATAG-GA-C
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           760615 7 +    964067 ATAG-GA-C
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10885353 7 +  10971483 ATTG-AT-A
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147663517 7 + 156195979 ATTG-AT-A
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            15501 7 +     23629 ATTG-AT-A
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60611446 7 +  78930452 ATTG-GA-A
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         38432 7 -     40477 ATTG-GA-A
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 I 5
s Cricetomys_gambianus.CriGam_scaffold_949                 277158 7 -    399297 ATTT-TA-A
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53027844 7 +  72327488 ATGT-TA-A
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             18489 7 -     19186 ACCA-GA-A
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            50202 7 -     70449 ATTG-GA-A
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  207063 7 -    956709 ATCA-AC-A
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 29635 7 -     67205 ATTT-AA-A
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                16659 7 +     26546 ATTT-AA-A
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             57751 7 -    236241 ATTT-AA-A
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          182476 5 -   6883506 --aa-aa-a
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16843738 7 +  31942871 ATTG-AA-A
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80035650 5 -  96802777 --TG-GA-A
i Delphinapterus_leucas.KZ290064.1                      I 1 C 0
s Desmodus_rotundus.KZ672188.1                           18697617 7 -  18957592 ATTG-GA-A
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 321343 7 +    993696 ATTG-GA-A
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   1995 7 +    151128 ATTG-GA-A
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dipodomys_ordii.KN672545.1                              3655051 3 +   4240102 -----AA-A
i Dipodomys_ordii.KN672545.1                            I 2 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 26687 3 +     28912 -----AA-A
i Dipodomys_stephensi.DipSte_scaffold_44365             I 2 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                34997 7 -     73477 ATTT-AA-A
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22994091 7 -  44670279 ATTG-AA-A
i Echinops_telfairi.JH980316.1                          C 0 I 6
s Eidolon_helvum.KE772537.1                                 11009 7 +     24177 ATTG-AA-A
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1490308 5 +   1727528 --TG-GA-A
i Elaphurus_davidianus.JRFZ01086400.1                   I 1 C 0
s Ellobius_lutescens.LOEQ01003611.1                        238402 7 -    369425 ATGT-TA-A
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           5512 7 -      7838 aTGT-TA-A
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85869987 7 +  99434291 ACTG-GA-A
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4703012 7 +   6522550 ATTG-GA-A
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5851763 5 -   7175178 --TC-GA-G
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13350266 5 +  41866177 --TC-GA-G
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          11756 5 +     92910 --TC-GA-G
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11531314 7 +  16010500 ACTG-GA-A
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48770157 7 -  48907691 ACTG-AT-A
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          313856 5 +    330699 --TG-GA-A
i Eschrichtius_robustus.EscRob_flattened_line_685       I 1 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             60310 5 +     89355 --TG-GA-A
i Eubalaena_japonica.EubJap_flattened_line_7756         I 1 C 0
s Eulemur_albifrons.k141_715837                              3929 7 +     13586 ATTG-AA-A
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               3866 7 -      6809 ATTG-AA-A
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            10340 7 +     36558 ATTG-AA-A
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             6658 7 +     60246 ATTG-AA-A
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                10137 7 +    109717 ATTG-AA-A
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               14520 7 +     16540 ATTG-AA-A
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                14793 7 +     27497 ATTG-AA-A
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           17250 7 +     26808 ATTG-AA-A
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                31985 7 +     46535 ATTG-AA-A
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              14707 7 -     29447 ATTG-AA-A
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129891163 7 - 159252932 ATTG-GA-A
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129278235 7 - 158578461 ATTG-GA-A
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 19370 7 +     52776 ATTG-GA-A
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13891601 7 -  19261668 attt-aa-a
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     209837 7 -    847004 ATCG-AA-G
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           12216 7 -     43889 AACG-AA-G
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           9285 7 +     27357 CTCA-AA-G
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               155179 7 +    324696 ATTG-CA-A
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    180108 5 -    189561 --TG-GA-A
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 1 C 0
s Glis_glis.GliGli_scaffold_79770                           11769 7 -     18683 ATAG-AA-A
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               4225 7 -     14630 ATTG-AA-A
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119651324 7 - 195582420 ATTG-AA-A
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   76499 7 +    118900 ATAG-AA-A
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                          730 7 +     10286 ACTG-AA-A
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_1254239                            8906 7 +      9690 ACTG-AA-A
i Hapalemur_gilberti.k141_1254239                       C 0 C 0
s Hapalemur_griseus.k141_1387522                             4535 7 +     56096 ACTG-AA-A
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        27785 7 -     42470 ACTG-AA-A
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        44409 7 -     54384 ACTG-AA-A
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              15410 7 +     53719 ATTG-GA-A
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                26306 5 -     91191 --TG-GA-A
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 1 C 0
s Heterocephalus_glaber.JH602058.1                        2549989 7 +  31725842 attt-aa-a
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               56396 7 +     73687 ATTA-GA-A
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              145885 5 +    277961 --AG-GA-A
i Hippopotamus_amphibius.HipAmp_scaffold_1308           I 1 C 0
s Hipposideros_armiger.JXIK01001085.1                      277214 7 -    477199 ATTG-TA-a
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              6373 7 -      9143 ATTG-TA-A
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg903                                     5357 8 -     61166 ATTGCAA-A
i Hoolock_leuconedys.ctg903                                I 277 I 243
s Hyaena_hyaena.HyaHya_flattened_line_20729                 14505 7 -     67322 CTTG-GA-A
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           17877 7 -    119109 ATTT-AA-A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              4051 7 +      5897 ATTG-AA-A
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_624065                                915 7 +      2112 ATTG-AA-A
i Hylobates_agilis.k141_624065                          C 0 C 0
s Hylobates_klossii.k141_466549                             10491 7 +     11537 ATTG-AA-A
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14623596 7 -  25970782 ATTG-AA-A
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                             852 7 -      2977 ATTG-AA-A
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     5051 7 +     22540 ATTT-AA-G
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7124770 6 +  13083262 ATG--AA-A
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_4418183                                    353 7 -      1457 ATTG-GC-A
i Indri_indri.k141_4418183                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               7638 5 +     17520 --TG-GA-A
i Inia_geoffrensis.IniGeo_flattened_line_66725          I 1 C 0
s Jaculus_jaculus.JH725517.1                              8564594 7 +  11848649 ATTG-CA-A
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               22470 5 +     37189 --TG-GA-A
i Kogia_breviceps.KogBre_flattened_line_35920           I 1 C 0
s Lagothrix_lagothricha.k141_12968                          49073 7 -    147782 ATTG-AA-A
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   112859 7 -    115756 ATTG-GA-A
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258406090 7 - 285822530 ATTG-AA-A
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        22853 7 +     39228 ACTG-AA-A
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            52228 7 +     63517 ACTG-AA-A
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        77478 7 +    116806 ATTG-AA-A
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     30492 7 -     33031 ACTG-AA-A
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3084204 7 -   3498232 ATTG-GA-A
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    11858 7 +     22452 ATTG-AA-A
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            134803 5 +   3060487 --TG-GA-A
i Lipotes_vexillifer.KE558548.1                         I 1 C 0
s Lophocebus_aterrimus.ctg55                             19247222 7 +  19376315 ACTG-AT-A
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            9601 7 +     84689 ATAG-AA-A
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3777350 7 +   6799190 ATAG-AA-A
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20590936 7 -  62548349 ACTT-GG-A
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11085556 7 +  39895028 ATTA-GA-A
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             18962 7 +     74745 ACTG-AT-A
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12705418 7 +  12821369 ACTG-AT-A
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                1063 7 -      3136 ACTG-AT-A
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           45880 7 +     63263 ACTG-AT-A
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                  583 7 -      2568 ACTG-AT-A
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 1169 7 -      7381 ACTG-AT-A
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  44387 7 -     79256 ACTG-AT-A
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196034495 7 + 196197964 ACTG-AT-A
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11444662 7 +  11645122 ACTG-AT-A
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   3334 7 -     46448 ACTG-AT-A
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                1006 7 -     13212 ACTG-AT-A
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 14686 7 -     55006 ACTG-AT-A
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43839804 7 +  43892939 ACTG-AT-A
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               15973 7 -     24607 ACTG-AT-A
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               3339 7 -     27140 ACTG-AT-A
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                700423 7 +    802869 ATTG-GA-T
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43436381 7 -  43563597 ACTG-AT-A
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4449207 7 -   4543643 ACTG-AT-A
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            144922 7 +    252755 atta-ga-a
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             34997 7 +     58827 atta-ga-a
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36872609 6 +  64221397 atg--aa-a
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       63221 7 -    234502 ATTG-GA-A
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_146202             797 7 -      1999 ACTG-GA-A
i Mellivora_capensis.MelCap_flattened_line_146202       C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               11319 7 +     15977 ATTT-TA-A
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1045582 7 -  26018355 ACGT-TA-A
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Microcebus_murinus.CM007691.1                          16509095 7 +  47401472 ATTG-AA-A
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  30504 7 -     48017 ATTA-AA-A
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               21493 7 -     32043 ATTG-GA-A
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22818692 7 -  98408828 ATGT-TA-A
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8208484 7 +  10048721 ATTG-AA-A
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            33140 7 +     45743 ATTG-AA-A
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                          934 7 +     29742 ACTG-AT-A
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         9712 7 -    104932 ATTG-GA-A
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     4485 7 +      8497 ATTG-AA-A
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 145238 5 +    154973 --TG-GA-A
i Monodon_monoceros.MonMon_M_scaffold_5598              I 1 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                160001 7 +    265003 ATTG-GA-A
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 3410 5 -      4346 --TG-GA-A
i Moschus_moschiferus.MosMos_scaffold_146101            I 1 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  143101 7 -    168139 ATTG-GA-A
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          18375 7 -    100666 ATTG-GA-A
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70765188 7 +  92629107 ATTT-TA-A
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75488225 7 +  98207768 attt-ta-a
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67554467 7 +  89017189 attt-ta-a
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74329404 7 +  97876770 attt-ta-a
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             10480 7 +     98495 aaaG-AA-A
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 209 C 0
s Mustela_putorius.JH417978.1                             4422369 7 -  28371801 ACTG-GA-A
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     88938 7 -    117718 ATTT-AA-A
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               966677 7 +   8389877 ATTG-GA-A
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5018353 7 +   6462685 ATTG-GA-A
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3464257 7 -   3747815 ATTG-GA-A
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         9472 7 +     66751 ATTG-GA-A
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3876 7 -      8794 ATAG-AA-A
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            117052 7 +    362372 ACTA-TA-A
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               7436 7 +     48152 ATTG-AT-A
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4483104 7 -  14209539 ATTG-GA-A
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3949851 5 -   4490290 --TG-GA-A
i Neophocaena_asiaeorientalis.KZ688543.1                I 1 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  48106 7 +     94413 ATTG-GA-C
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1439838                           1793 7 +      3718 ATTG-AA-A
i Nomascus_annamensis.k141_1439838                      I 65 I 28
s Nomascus_concolor.k141_226614                               153 7 -      5092 ATTG-AA-A
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_642452                             936 7 +      2851 ATTG-AA-A
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_a.k141_595747                                  1574 7 +      4512 ATTG-AA-A
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                28549 7 +   3668941 ATTA-GA-A
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65566037 7 -  95554990 ATAG-AA-A
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            2766 7 +      6470 ATAG-AA-A
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65668375 7 +  89412551 ATAG-AA-A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4994898 7 -  23139505 ATTG-AA-A
i Ochotona_princeps.JH802095.1                          C 0 I 33
s Octodon_degus.JH651621.1                                3684477 6 +  10294119 ATTT-AA--
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             677749 7 -   3126709 ATTG-GA-A
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1078538 5 +   1425656 --TG-GA-A
i Odocoileus_virginianus.KZ101650.1                     I 1 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         35834 5 +     78940 --TG-GA-A
i Okapia_johnstoni.LVCL01S0017931.1                     I 1 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  123949 8 +    145789 ATGT-TAAA
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  35721 5 +     62360 ATTT-C---
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7223535 5 -   7562323 --TG-GA-A
i Orcinus_orca.KB316965.1                               I 1 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              43254 7 -     66828 ATTG-AA-A
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141874517 7 + 163896628 ATTG-AA-A
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      305883 7 -    505867 ATTA-GA-A
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       37933 7 +     38679 ATCG-AA-G
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18007361 7 -  38779656 ATCG-AA-G
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134076100 5 - 275406953 --TG-GA-A
i Ovis_aries.CM001582.2                                 I 1 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      77314 5 +    140051 --TG-GA-A
i Ovis_canadensis.OviCan_scaffold_6251                  I 1 C 0
s Pan_paniscus.CM003386.1                               127573585 7 - 205426864 ATTG-AA-A
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120150738 7 - 196562556 ATTG-AA-A
i Pan_troglodytes.CM009241.2                            C 0 I 16
s Panthera_onca.PanOnc_flattened_line_1615                  32565 7 +    295523 ATTG-GA-A
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3636299 7 +  18214204 ATTG-GG-A
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5025946 7 -   6340057 ATTG-GA-A
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1064961 5 -   1292953 --TG-GA-A
i Pantholops_hodgsonii.KE114631.1                       I 1 C 0
s Papio_anubis.CM001492.2                               188155172 7 - 188283584 ACTG-AT-A
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             3489 7 +      5367 ACTG-AT-A
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47512560 7 +  47705337 ACTG-AT-A
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 66538 7 -    104429 ACTG-AT-A
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    5070 7 +     14967 ACTG-AT-A
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                  931 7 -      7628 ACTG-AT-A
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113881 7 -    135482 ATTG-GA-A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           4350 7 -     23713 ATGG-AA-A
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            23658 7 -     27972 ATGG-AA-A
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      42511 7 -     45160 ATTC-AA-A
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4948907 7 -   8017169 attt-ta-a
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    11140 7 -     36578 GCTT-AA-A
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            120152 5 -    122454 --TG-GA-A
i Phocoena_phocoena.PhoPho_flattened_line_11948         I 1 C 0
s Piliocolobus_badius.k141_1987485                            958 7 -      5908 ACTG-AT-A
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       1578 7 -     17985 ATTG-AT-A
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                             945 7 +      7694 ATTG-AT-A
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26739423 7 +  26888534 ATTG-AT-A
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            96089 7 +    112873 ATTG-GA-A
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             42555 7 -     61926 ATTG-AA-A
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        23986 7 +     78826 ATTG-AA-A
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              7935 7 -     15800 ATTG-AA-A
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        11133 7 -     16101 ATTG-AA-A
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          4442 7 +      9673 ATTG-AA-A
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13473438 7 -  19735023 ATTG-AA-A
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           12344 7 -     31692 ATTG-AA-A
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           4220 5 +     21690 --TG-GA-A
i Platanista_gangetica.PlaMin_flattened_line_72990      I 1 C 0
s Plecturocebus_bernhardi.k141_959214                       21779 7 +     44506 ATTG-AA-A
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        21991 7 +     67491 ATTG-AA-A
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      12230 7 -     98129 ATTG-AA-A
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     21830 7 +    147771 ATTG-AA-A
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        22085 7 -     23762 ATTG-AA-A
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          2551 7 -     55515 ATTG-AA-A
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         21904 7 +    152463 ATTG-AA-A
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      8664 7 +      8943 ATTG-AA-A
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                         11626 7 +    134592 ATTG-AA-A
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          22214 7 -     75465 ATTG-AA-A
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              186110 7 -    373494 ATTG-AA-A
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19806758 7 +  19899266 ATTG-AA-A
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               4680 7 -     15069 ATTG-AT-A
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              4814 7 +     14865 ATTG-AT-A
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                76260 7 +     78963 ATTA-GA-A
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6847471 7 +  12164890 ACTG-AA-A
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    666693 7 -   2312742 ATTG-AC-A
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         2520 7 +     11805 ATTG-AC-A
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           41856 7 +     52369 ATTG-AC-A
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         34246 7 -     44753 ATTG-AC-A
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            16166 7 +     27322 ATTG-AC-A
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       15802 7 -     53241 ATTG-AC-A
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         38074 7 -     48185 ATTG-AC-A
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           32857 7 +     77221 attt-ta-a
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            2667 7 -     27784 ATTG-GA-A
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        244463 7 -    344369 ACTG-GA-A
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13244810 7 -  17261082 ATTG-GA-A
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             602760 7 -   3946241 ATTG-GA-A
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131532528 7 - 161321710 ATTG-GA-A
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             28798 7 +     56732 ATTG-AT-A
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6805289 7 +   6970761 ATTG-AT-A
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             4683 7 +     18040 ATTG-AT-A
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                14615 5 +     68503 --TG-GA-A
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 1 C 0
s Rattus_norvegicus.chr11                                13914230 7 +  90463843 attt-ta-a
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1786620 7 +   2252614 ATTG-GA-a
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_1391695                            911 7 -      1866 ATTG-AT-A
i Rhinopithecus_bieti.k119_1391695                      C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206376568 7 - 206558726 ATTG-AT-A
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44855468 7 -  45163003 ATTG-AT-A
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                18100 7 +    109198 ATTG-GA-A
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       6417 5 +     12214 --TG-GA-A
i Saiga_tatarica.SaiTat_scaffold_82192                  I 1 C 0
s Saimiri_boliviensis.NW_024100938.1                     15671643 7 -  43202129 attg-aa-a
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        3560 7 +     34089 ATTG-AA-A
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              3501 7 -     60842 ATTG-AA-A
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              3596 7 +     67014 ATTG-AA-A
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              3574 7 +     60816 ATTG-AA-A
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 3511 7 -     76454 ATTG-AA-A
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17340236 7 -  30362882 ATTG-AA-A
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         19595 7 -     62485 ATTG-AA-A
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   30189 7 -    114521 ATTT-AA-A
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        2295 7 +     15331 ATTG-AT-A
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       7692 7 +     20762 ATTG-AT-A
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         117690 7 +    130994 ATTG-AT-A
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           36481 7 +     46263 ATTG-AT-A
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     29595 7 +     42640 ATTG-AT-A
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        12639 7 +     30600 ATTG-AT-A
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   98490 7 -    120886 ATAT-TA-A
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            16810 7 +    739146 ATTG-GA-A
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17749447 7 -  27805282 ACAA-GA-A
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2238690 6 +   2842873 ATG--AA-A
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             233214 7 -    276980 TCTG-GA-A
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            25767 7 +     62062 ATTA-GA-A
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189270693 7 + 218635234 ATTG-GA-A
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        13853 7 -  13920577 ATTG-AA-A
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               4835 7 -      6213 TGTG-GA-A
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               13551 7 +     45698 ATAG-AA-A
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      805547 4 +   1148477 ---A-GA-A
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  56207 4 +     99546 ---A-GA-A
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               25382 7 +     42269 ACTG-AA-A
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               58698 7 +     65473 ACTG-AA-A
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194006699 7 - 194193292 ACTG-AT-A
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             38206 7 -     47444 ATTT-AA-A
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  4408 7 +      6782 ATAA-AA-A
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  134677 7 -    259118 ATTG-GA-A
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        25802 7 +     38948 ATTG-AT-A
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   19529 7 -     32910 ATTG-AT-A
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                       916 7 -     12939 ATTG-AT-A
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                        851 7 -     14244 ATTG-AT-A
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           42249 7 -     54611 ATTG-AT-A
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_878600                        1079 7 +      1165 ATTG-AT-A
i Trachypithecus_germaini.k141_878600                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     2227 7 -     15592 ATTG-AT-A
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                           884 7 +     14371 ATTG-AT-A
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  50636 7 +     51589 ATTG-AT-A
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       13817 7 +     14732 ATTG-AT-A
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       4289 7 -     28054 ATTG-AT-A
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44659089 7 -  44834318 ATTG-AT-A
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       1392 7 +     13828 ATTG-AT-A
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   4004 2 +     90398 ------A-A
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16081398 7 +  31416278 ATTG-GA-A
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2791699 7 -   3938065 ATTG-AA-A
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    3967 7 +     13056 ATTG-AA-A
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69312252 5 -  96451834 --TG-GA-A
i Tursiops_truncatus.MRVK01000923.1                     I 1 C 0
s Uropsilus_gracilis.UroGra_scaffold_139357                   714 3 +      2103 -----GA-A
i Uropsilus_gracilis.UroGra_scaffold_139357             C 0 C 0
s Ursus_maritimus.KK498671.1                              6513021 7 +  28682327 ATTG-GA-A
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  4175 7 -     20643 ATTG-AA-A
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             23716 7 -     33872 ATTG-AA-A
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1523488 7 -   2331223 ACTG-GG-A
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                135956 7 -    281493 ATTA-GA-A
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       125791 7 -    134049 ATGG-AA-A
i Xerus_inauris.XerIna_scaffold_7898                    C 0 I 1
s Zalophus_californianus.ZalCal_flattened_line_4097        212484 7 -    227762 ATTG-GA-A
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           5749 5 -      8775 --TG-GA-A
i Ziphius_cavirostris.ZipCav_flattened_line_127025      I 1 C 0
e Dinomys_branickii.DinBra_scaffold_1996                   156356 54 +    228994 I
e Elephantulus_edwardii.JH947210.1                        7804622 10712 +  15467074 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     14107 296 -     20485 I
e Hylobates_pileatus_a.tarseq_592                             33311 5 -     60944 I
e Nomascus_siki_b.tarseq_80                             24175 0 -  18771707 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               10846 16 +    209709 AT------------------------GCAA--A-----------AGT----C--ATATA
s Acinonyx_jubatus.LLWD01000356.1                         2032194 18 +   3721120 AT------------------------ACAG--A-A-A-------TCA----T--ATATA
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    111199 17 -    189883 AT------------------------ATAA--A----------GTCA----C--AGACA
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10655541 18 +  23371972 GT------------------------ATAC--A-A-A-------TCA----T--ATATA
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7092466 18 -  16596857 GT------------------------ATAC--A-A-A-------TCA----T--ATATA
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   11870 18 -     22067 GT------------------------ACAA--ACA---------TCA----C--AGATA
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_3103728                   1448 16 +      1665 AT------------------------GCAA--A-----------AGT----C--ATATA
i Allenopithecus_nigroviridis.k141_3103728              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                          924 16 -     29318 AT------------------------GCAA--A-----------AGT----C--ATATA
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_21674                           1141 16 -      1421 AT------------------------GCAA--A-----------AGT----C--ATATA
i Allochrocebus_preussi.k141_21674                      C 0 C 0
s Allochrocebus_solatus.k141_371672                           818 16 -     80423 AT------------------------GCAA--A-----------AGT----C--ATATA
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             9111 16 -     18050 AT------------------------GCAA--A-----------AGT----C--ATATA
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                 10201 16 -     11521 AT------------------------GCAA--A-----------AGT----C--ATATA
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              9788 16 -     21359 AT------------------------GCAA--A-----------AGT----C--ATATA
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_298055                                 1084 16 +      1823 AT------------------------GCAG--A-----------AGT----C--ATATA
i Alouatta_juara.k141_298055                            C 0 C 0
s Alouatta_macconnelli.k141_1331706                          9084 16 -     10438 AT------------------------GCAA--A-----------AGT----C--ATATA
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            5740 16 +      7047 AT------------------------GCAA--A-----------AGT----C--ATATA
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             9020 16 +     10410 AT------------------------GCAA--A-----------AGT----C--ATATA
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            2830 16 -      4927 AT------------------------GCAA--A-----------AGT----C--ATATA
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_1676232                           25906 16 -     26576 AT------------------------GCAA--A-----------AGT----C--ATATA
i Alouatta_seniculus.k141_1676232                       n 16 I 69
s Ammotragus_lervia.NIVO01013474.1                        3518964 18 +   4113121 GT------------------------ACAA--A-A-A-------TCA----C--ATATA
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      389117 41 -    631301 TGGATCATTTATCTGCTGAATCTCTTACA---A-A-A-------TCA----T--ACATA
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            29545 18 +     33004 GT------------------------ACAA--A-A-A-------GCA----C--ATAAA
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 61468 16 +     78111 AT------------------------GCAA--A-----------AGT----C--ATATA
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            4409 16 +     22701 AT------------------------GCAA--A-----------AGT----C--ATACA
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5748366 16 +   9889416 AT------------------------GCAA--A-----------AGT----C--ATATA
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             4951 16 -    104377 AT------------------------GCAA--A-----------AGT----C--ATATA
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               4957 16 +     23246 AT------------------------GCAA--A-----------AGT----C--ATATA
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     2625 17 +      5067 AT------------------------ACAA--A-A---------TCA----C--ACATA
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      17139 16 +     17483 GT------------------------ACAA--A-A-A-------TCA----C--A--TA
i Arctocebus_calabarensis.k141_1161114                  C 0 I 2
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 7518 41 -     29036 CCGATCATTTTTCTGCTAAATTTCTTACA---A-A-A-------TCA----T--AACTA
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9538216 16 +  39197703 AT------------------------GCAA--A-----------AGT----C--ATATA
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             59487 16 +     85812 AT------------------------GCAA--A-----------AGT----C--ATATA
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                10499 16 +     89302 AT------------------------GCAA--A-----------AGT----C--ATGTA
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             15004 16 -     58268 AT------------------------GCAA--A-----------AGT----C--ATATA
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             62995 16 +    119057 AT------------------------GCAA--A-----------AGT----C--ATATA
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               4964 16 -     25888 AT------------------------GCAA--A-----------AGT----C--ATATA
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 5598 18 -     16375 GT------------------------ACAA--A-A-A-------TCA----C--ATATA
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              1918 18 +      2719 GT------------------------ACAA--A-A-A-------TCA----C--ATATA
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26378976 18 +  51448160 GT------------------------ACAA--A-A-A-------TCA----T--ACATA
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        4208 18 -     13118 GT------------------------ACAA--A-A-A-------TCA----T--ACATA
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   42026 18 -     72089 GT------------------------ACAA--A-A-A-------TCA----C--ATATA
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6558057 18 +   6870073 GT------------------------ACAA--C-A-A-------GCA----C--ATATA
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138138296 18 - 161108492 GT------------------------ACAA--A-A-A-------GCA----C--ATATA
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     570670 18 -    998990 GT------------------------ACAA--A-A-A-------GCA----C--ATATA
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136294029 18 - 158972876 GT------------------------ACAA--A-A-A-------GCA----C--ATATA
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1229784 18 -   1914593 GT------------------------ACAA--A-A-A-------GCA----C--ATAta
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               112857 16 -    171031 AT------------------------GTAA--A-----------AGT----C--ATATA
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 11885 16 +    125063 AT------------------------GTAA--A-----------AGT----C--ATATA
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                13930 16 -    216513 AT------------------------GTAA--A-----------AGT----C--ATATA
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        6470 16 -    134917 AT------------------------GTAA--A-----------AGT----C--ATATA
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3218388 18 -   8989139 GG------------------------ACAA--A---------GGTCA----T--ATTTA
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           396093 18 -  15254737 GG------------------------ACAA--A---------GGTCA----T--ATTTA
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2971826 18 +   6889770 GG------------------------ACAA--A---------GGTCA----T--ATTTA
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11516917 18 +  39901454 GT------------------------ATGA--A-A-A-------TCA----T--ATATA
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   11935 18 +     87036 GT------------------------ATGA--A-A-A-------TCA----T--ATATA
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11263578 18 -  35597290 GT------------------------ATGA--A-A-A-------TCA----T--ATATA
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11086107 18 +  39895921 GT------------------------ATGA--A-A-A-------TCA----T--ATATA
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16453131 18 -  44759192 GT------------------------ATGA--A-A-A-------TCA----T--ATATA
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21324040 18 + 157394656 GT------------------------ACAA--A-A-A-------TCA----C--ACATA
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135705267 18 - 157403528 GT------------------------ACAA--A-A-A-------TCA----C--ATATA
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_933029                   961 18 +      1311 AA------------------------GTAA--A-A-A-------TCA----C--ATAAA
i Capromys_pilorides.CapPil_scaffold_933029             I 284 I 41
s Carlito_syrichta.NW_007248099.1                          307905 18 +    345090 AT------------------------ACAA--GGA---------TCA----C--ATATA
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               58315 41 +     67245 TTGATCACTTATCTGCTAAATCTCTTACA---A-A-A-------TCA----T--ACATA
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   29569 18 +     33760 TT------------------------AGGA--A-A-A-------TCA----C--ATATG
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   157603 18 -    276539 GT------------------------ACAA--A-A-A-------TCA----T--TTGCA
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15785513 18 -  24422027 NN------------------------NNNN--N---------NNNNN----N--NNNNN
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15797447 18 -  24440124 ag------------------------gtaa--a---------aatca----c--ATACA
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       175638 18 +    436027 AG------------------------GTAA--A-A-A-------TCA----C--ATACA
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18889700 16 -  29618158 AT------------------------GCAA--A-----------AGT----T--ATATA
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 7244 16 -     26817 AT------------------------GCAA--A-----------AGT----T--ATATA
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                11484 16 +     25043 AT------------------------GCAA--A-----------AGT----T--ATATA
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         6938 18 +     21754 GT------------------------ACAA--GGA---------TCA----C--ATATA
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4362703 18 +   7569818 Gt------------------------acaa--a---------aatca----t--ttata
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         2455 18 -      9338 GT------------------------ACAA--A-A-A-------TCA----T--TTATA
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6554140 16 +   6739814 AT------------------------GCAA--A-----------AGT----C--ATATA
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      25617 16 +     60454 AT------------------------GCAA--A-----------AGT----C--ATATA
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                           822 16 -     21101 AT------------------------GCAA--A-----------AGT----C--ATATA
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         58132 16 -    107033 AT------------------------GCAA--A-----------AGT----C--ATATA
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        1024 16 -     17608 AT------------------------GCAA--A-----------AGT----C--ATATA
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          28519 16 +     30494 AT------------------------GCAA--A-----------AGT----C--ATATA
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          57365 16 -     59240 AT------------------------GCAA--A-----------AGT----C--ATATA
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          1066 16 +     16677 AT------------------------GCAA--A-----------AGT----C--ATATA
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           23224 16 +     35983 AT------------------------GCAA--A-----------AGT----C--ATATA
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11989752 16 +  12117833 AT------------------------GCAA--A-----------AGT----C--ATATA
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46476510 16 +  46592721 AT------------------------GCAA--A-----------AGT----C--ATATA
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      40061 16 -     45581 AT------------------------GCAA--A-----------AGT----C--ATATA
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       1067 16 +     35577 AT------------------------GCAA--A-----------AGT----C--ATATA
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                         843 16 -     25661 AT------------------------GCAA--A-----------AGT----C--ATATA
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                         821 16 -     17744 AT------------------------GCAA--A-----------AGT----C--ATATA
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        20430 16 +     37128 AT------------------------GCAA--A-----------AGT----C--ATATA
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           1647 18 -      6963 GT------------------------GGCA--G-A-A-------GCA----C--ATATA
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           57892 18 -     68416 GT------------------------ACAA--A-A--------GTCG----C--ATGTA
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            6935 18 +     13308 GT------------------------ACAA--A-A--------GTCG----C--ATATA
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             4500 16 -     18223 AT------------------------GCAA--A-----------AGT----C--ATATA
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             21523 16 +     25473 AT------------------------GCAA--A-----------AGT----C--ATATA
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           40558 16 +     57117 AT------------------------GCAA--A-----------AGT----C--ATATA
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          45237 16 +     54541 AT------------------------GCAA--A-----------AGT----C--ATATA
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15960658 17 +  43084221 ag------------------------gtaa--a---------aaccA----T--GTA-A
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         70059 16 +    196370 AT------------------------GTAA--A-----------AGT----C--ATATA
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          14239 16 +     40510 AT------------------------GTAA--A-----------AGT----C--ATATA
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15137984 15 -  15256731 AT------------------------GC-A--A-----------AGT----C--ATATA
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      33031 15 -     53260 AT------------------------GC-A--A-----------AGT----C--ATATA
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101143594 16 + 101219884 AT------------------------GCAA--A-----------AGT----C--ATATA
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                15311 17 -     21363 GT------------------------GCCA--ACA---------TTG----C---TATA
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           760622 17 +    964067 TT------------------------GCCA--ACA---------TCG----C---TATA
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10885360 16 +  10971483 AT------------------------GCAA--A-----------AGT----C--ATATA
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147663524 16 + 156195979 AT------------------------GCAA--A-----------AGT----C--ATATA
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            15508 16 +     23629 AT------------------------GCAA--A-----------AGT----C--ATATA
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60611453 18 +  78930452 GT------------------------ACAA--A-A--------GTCA----t--actta
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         38444 18 -     40477 AT------------------------ACAA--A-A-A-------TTA----T--ATATA
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     I 5 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 277165 17 -    399297 AC------------------------ATCA--A----------GTCA----C--ACATA
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53027851 17 +  72327488 AT------------------------ATAA--A----------GTCA----C--AGACA
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             18496 18 -     19186 GT------------------------TAAA--A-A-A-------ACA----C--ATATA
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            50209 18 -     70449 GT------------------------ACAC--A-A-A-------TCA----T--ATATT
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  207070 18 -    956709 GT------------------------CCAT--ATA---------CCA----C--ATACA
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 29642 18 -     67205 AA------------------------GTAA--ATA---------TCG----T--GTACA
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                16666 18 +     26546 AG------------------------CTAA--A-A-A-------TCA----C--ATACA
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             57758 18 -    236241 AG------------------------GTAA--A-A-A-------TCA----C--ACACA
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          182481 18 -   6883506 gt------------------------ggaA--G-A-A-------TCA----C--ATAta
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16843745 18 +  31942871 GT------------------------ACAA--A-A-A-------TGA----C--ATATA
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80035655 18 -  96802777 GT------------------------ACAA--A-A-A-------CCA----T--ATATA
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18697624 41 -  18957592 TTGATCATTTATCTGCTAAATCTCTTACA---A-A-A-------TCA----T--ACATA
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 321350 18 +    993696 Gt------------------------acaa--a---------aatca----t--ttata
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   2002 18 +    151128 GT------------------------ACAA--A-A-A-------TCA----T--TTATA
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dipodomys_ordii.KN672545.1                              3655054 18 +   4240102 GA------------------------ACTG--CCA---------TCA----C--ATAAA
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 26690 18 +     28912 GA------------------------ACTG--CCA---------TCA----C--ATAAA
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                35004 18 -     73477 AG------------------------GTAA--A-A-A-------TCA----T--ATACA
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22994104  5 -  44670279 ------------------------------------------------------ATATG
i Echinops_telfairi.JH980316.1                          I 6 C 0
s Eidolon_helvum.KE772537.1                                 11016 18 +     24177 GT------------------------ACAA--A-A-A-------TCA----T--ATATA
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1490313 18 +   1727528 GT------------------------acaa--a---------aatca----c--atata
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        238409 16 -    369425 C-------------------------TTAG--C----------GTCG----C--AGTTA
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           5519 16 -      7838 C-------------------------TTAG--C-A---------TCG----C--AGTTA
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85869994 18 +  99434291 GT------------------------ATAC--A-A-A-------TCA----T--ATATA
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4703019 40 +   6522550 TTGATCATTTA-CTGCTGAATCTTTTACA---A-A-A-------TCA----T--ATATA
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5851768 18 -   7175178 GT------------------------ACAA--A-A-A-------TCA----T--ACATA
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13350271 18 +  41866177 GT------------------------ACAA--A-A-A-------TCA----T--ACATA
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          11761 18 +     92910 GT------------------------ACAA--A-A-A-------TCA----T--ACATA
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11531321 18 +  16010500 AA------------------------GCAA--A-TC--------TTA----T--ATCTG
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48770164 16 -  48907691 AT------------------------GCAA--A-----------AGT----C--ATATA
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          313861 18 +    330699 GT------------------------ACAA--A-A-A-------TCA----T--ACATA
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             60315 18 +     89355 GT------------------------ACAA--A-A-A-------TCA----T--ACATA
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              3936 18 +     13586 GT------------------------ACTA--A-A-A-------TCT----C--ATGCA
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               3873 18 -      6809 GT------------------------ACTA--A-A-A-------TTG----C--ATACA
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            10347 18 +     36558 GT------------------------ACTA--A-A-A-------TCG----C--ATGTA
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             6665 18 +     60246 GT------------------------ATTA--A-A-A-------TCG----C--ATGTA
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                10144 18 +    109717 GT------------------------ACTA--A-A-A-------TTG----C--ATACA
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               14527 18 +     16540 GT------------------------ACTA--A-A-A-------TCG----C--ATGTA
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                14800 18 +     27497 GC------------------------ACTA--A-A-A-------TCG----C--ATGCA
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           17257 18 +     26808 GG------------------------ACTA--A-A-A-------TCG----C--ATGTA
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                31992 18 +     46535 GT------------------------ACTA--A-A-A-------TTG----C--ATACA
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              14714 18 -     29447 GT------------------------ACTA--A-A-A-------TTG----C--ATACA
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129891170 18 - 159252932 AT------------------------ACAG--A-A-A-------TCA----T--ATATA
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129278242 18 - 158578461 AT------------------------ACAG--A-A-A-------TCA----T--ATATA
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 19377 18 +     52776 AT------------------------ACAG--A-A-A-------TCA----T--ATATA
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13891608 20 -  19261668 at------------------------ataaaaa---------aatca----c--aaata
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     209844 18 -    847004 GT------------------------TCAA--A-A-A-------TCA----C--AGATA
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           12223 18 -     43889 GT------------------------TCAA--A-A-A-------TCA----C--AGATA
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           9292 18 +     27357 GT------------------------TCAA--A-A-A-------TCA----C--AGATA
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               155186 18 +    324696 GT------------------------ACAA--A-A-A-------TCA----C--ACATA
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    180113 18 -    189561 GT------------------------ACAA--A-A-A-------TCA----C--ATata
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           11776 18 -     18683 AT------------------------ACAA--GCA---------TCA----C--ATATA
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               4232 16 -     14630 AT------------------------GCAG--A-----------AGT----C--ATATA
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119651331 16 - 195582420 AT------------------------GCAG--A-----------AGT----C--ATATA
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   76506 18 +    118900 AT------------------------AAAA--GCA---------TCA----C--ATATA
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                          737 18 +     10286 GT------------------------ACAA--A-A-A-------TCG----C--ACATA
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_1254239                            8913 18 +      9690 GT------------------------ACAA--A-A-A-------TCG----C--ACATA
i Hapalemur_gilberti.k141_1254239                       C 0 C 0
s Hapalemur_griseus.k141_1387522                             4542 18 +     56096 GT------------------------ACAA--A-A-A-------TCG----C--ACATA
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        27792 18 -     42470 GT------------------------ACAA--A-A-A-------TCG----C--ACATA
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        44416 18 -     54384 GT------------------------ACAA--A-A-A-------TCG----C--ACATA
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              15417 18 +     53719 GT------------------------ACAC--A-A-A-------TCA----T--ATATT
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                26311 18 -     91191 GT------------------------ACAA--A-A-A-------TCA----C--ATATA
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2549996 18 +  31725842 at------------------------ataa--a---------aatca----c--ataca
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               56403 18 +     73687 GT------------------------GTCC--A-A-A-------TTA----C--ATATG
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              145890 18 +    277961 GT------------------------ACAA--A-A-A-------TCA----T--ATATA
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      277221 18 -    477199 gt------------------------acaa--a---------attta----t--atata
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              6380 18 -      9143 GT------------------------ACAA--A-A-A-------TTA----T--ACATA
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      3632 16 -   7690867 AT------------------------GCAA--A-----------AGT----C--ATATG
i Hoolock_leuconedys.ctg79                                 I 7 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 14512 18 -     67322 GT------------------------ACAC--A-A-A-------TCA----T--ATATA
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           17884 18 -    119109 AG------------------------GTAA--A-A-A-------TCA----C--ATACA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              4058 16 +      5897 AT------------------------GCAA--A-----------AGT----C--ATATG
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_624065                                922 16 +      2112 AT------------------------GCAA--A-----------AGT----C--ATATG
i Hylobates_agilis.k141_624065                          C 0 C 0
s Hylobates_klossii.k141_466549                             10498 16 +     11537 AT------------------------GCAA--A-----------AGT----C--GTATG
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14623603 16 -  25970782 AT------------------------GCAA--A-----------AGT----C--ATATG
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                             859 16 -      2977 AT------------------------GCAA--A-----------AGT----C--ATATG
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     5058 18 +     22540 AT------------------------ATAA--A-A-A-------TAA----T--ATATA
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7124776 18 +  13083262 GT------------------------ACAA--A-A-A-------TCA----C--GTATA
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_4418183                                    360 12 -      1457 GT------------------------ACAA--A-A-A-------TTG------------
i Indri_indri.k141_4418183                              C 0 I 5
s Inia_geoffrensis.IniGeo_flattened_line_66725               7643 16 +     17520 GT------------------------ACAA--A-A----------CA----C--ACATA
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8564601 18 +  11848649 GT------------------------ACAG--A-A-A-------TCA----C--AGATA
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               22475 18 +     37189 GT------------------------ACAA--A-A-A-------TCA----T--ACATA
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          49080 16 -    147782 AT------------------------GCAA--A-----------AGT----C--ATATA
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   112866 40 -    115756 TTGATCATTTA-CTGCTGAATCTTTTACA---A-A-A-------TCA----T--ATGTA
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258406097 18 - 285822530 GT------------------------ACAA--A-A-A-------TCG----C--ACGTA
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        22860 18 +     39228 GT------------------------ACAA--G-A--------GGCA----C--ATATA
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            52235 18 +     63517 GT------------------------ACAA--G-A--------GGCA----C--ATATA
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        77485 18 +    116806 GT------------------------ACAA--G-A--------GTCT----C--ATGTA
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     30499 18 -     33031 GT------------------------ACAA--G-A--------GGCA----C--ATATA
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3084211 18 -   3498232 GT------------------------ATAC--A-A-A-------TCA----T--ATATA
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    11865 18 +     22452 GT------------------------CTAA--A-AC--------TTA----C--ACATA
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            134808 18 +   3060487 GT------------------------ACAA--A-A-A-------TCA----T--ACATA
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19247229 16 +  19376315 AT------------------------GCAA--A-----------AGT----C--ATATA
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            9608 18 +     84689 GT------------------------ACAA--A-A-A-------TCA----C--ATACA
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3777357 18 +   6799190 GT------------------------ACAA--A-A-A-------TCA----C--ATACA
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20590943 18 -  62548349 GT------------------------GCCA--A-A-A-------TCA----C--ATATA
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11085563 18 +  39895028 GT------------------------ATGC--A-A-A-------TCA----T--ATATA
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             18969 16 +     74745 AT------------------------GCAA--A-----------AGT----C--ATATA
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12705425 16 +  12821369 AT------------------------GCAA--A-----------AGT----C--ATATA
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                1070 16 -      3136 AT------------------------GCAA--A-----------AGT----C--ATATA
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           45887 16 +     63263 AT------------------------GCAA--A-----------AGT----C--ATATA
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                  590 16 -      2568 AT------------------------GCAA--A-----------AGT----C--ATATA
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 1176 16 -      7381 AT------------------------GCAA--A-----------AGT----C--ATATA
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  44394 16 -     79256 AT------------------------GCAA--A-----------AGT----C--ATATA
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196034502 16 + 196197964 AT------------------------GCAA--A-----------AGT----C--ATATA
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11444669 16 +  11645122 AT------------------------GCAA--A-----------AGT----C--ATATA
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   3341 16 -     46448 AT------------------------GCAA--A-----------AGT----C--ATATA
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                1013 16 -     13212 AT------------------------GCAA--A-----------AGT----C--ATATA
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 14693 16 -     55006 AT------------------------GCAA--A-----------AGT----C--ATATA
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43839811 16 +  43892939 AT------------------------GCAA--A-----------AGT----C--ATATA
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               15980 16 -     24607 AT------------------------GCAA--A-----------AGT----C--ATATA
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               3346 16 -     27140 AT------------------------GCAA--A-----------AGT----C--ATATA
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                700430 18 +    802869 GT------------------------ACAA--A-A-A-------TCA----T--ATATA
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43436388 16 -  43563597 AT------------------------GCAA--A-----------AGT----C--ATATA
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4449214 16 -   4543643 AT------------------------GCAC--A-----------AGT----C--ATATA
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            144929 11 +    252755 at------------------------ataa--a---------aata-------------
i Manis_javanica.JSZB01003966.1                         C 0 I 87
s Manis_pentadactyla.KN017078.1                             35004 11 +     58827 at------------------------ataa--a---------aata-------------
i Manis_pentadactyla.KN017078.1                         C 0 I 87
s Marmota_marmota.CZRN01000005.1                         36872615 18 +  64221397 gt------------------------acaa--a---------aatca----c--aTATA
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       63228 18 -    234502 GT------------------------ACAC--A-A-A-------TTA----C--ACATA
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_146202             804 18 -      1999 GT------------------------GTAC--A-A-A-------TTA----T--ATATA
i Mellivora_capensis.MelCap_flattened_line_146202       C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               11326 17 +     15977 AA------------------------ATAA--A----------GTCA----C--AGACA
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1045589 17 -  26018355 CT------------------------ATAA--A----------GTCG----C--AGATA
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Microcebus_murinus.CM007691.1                          16509102 18 +  47401472 GT------------------------ACAA--A-A-A-------TCA----C--ATATG
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  30511 27 -     48017 GT------------------------GCAC--ACACACACACAAAAA----A--AAGTG
i Microgale_talazaci.MicTal_scaffold_34660              C 0 I 5
s Micronycteris_hirsuta.MicHir_scaffold_37978               21500 41 -     32043 TTGATCATTTATCTGCTAAATCTCTTACA---A-A-A-------TCA----T--ACATG
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22818699 16 -  98408828 C-------------------------ATAG--G----------TTCA----C--AGTTA
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8208491 41 +  10048721 TTGATCATTTATCTTCTGAATCTGTTACA---A-A-A-------TCA----T--ATATA
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            33147 41 +     45743 TTGATCATTTATCTGCTGAATCTGTTACA---A-A-A-------TCA----T--ATATA
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                          941 16 +     29742 AT------------------------GCAA--A-----------AGT----C--ATATA
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         9719 18 -    104932 GT------------------------ATAC--A-A-A-------TCA----T--ATATA
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     4492 18 +      8497 GT------------------------ACAA--A-A-A-------TCA----C--ATATG
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 145243 18 +    154973 GT------------------------ACAA--A-A-A-------CCA----T--ATATA
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                160008 41 +    265003 TTGATCATTTATCTGCTGAATCTCTCACA---A-A-A-------TTA----T--ATATA
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 3415 18 -      4346 GT------------------------ACAA--A-A-A-------TCA----C--ATATA
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  143108 18 -    168139 GT------------------------ACAC--A-A-A-------TCA----T--ATATT
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          18382 40 -    100666 TTGATCGTTTA-CTGCTGAATCTTTTACA---A-A-A-------TCA----T--ATATA
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70765195 17 +  92629107 AT------------------------ATAC--A----------GTCA----C--AGATA
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75488232 17 +  98207768 at------------------------ataa--a----------gtca----C--AGATA
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67554474 17 +  89017189 at------------------------ataa--a----------gtca----c--AGATA
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74329411 17 +  97876770 at------------------------ataa--a----------gtca----c--AGATA
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             10487 18 +     98495 GT------------------------ACAA--GCA---------TCA----C--ATATA
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4422376 18 -  28371801 GT------------------------GTAC--A-A-A-------TCA----T--ATATA
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     88945 18 -    117718 AA------------------------GTAA--AGA---------TCA----C--ATACA
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               966684 40 +   8389877 TTGATCATTTA-CTGCTGAATCTTTTACA---A-A-A-------TCA----T--ATATA
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5018360 40 +   6462685 TTGATCATTTA-CTCCTGAATCTTTTACA---A-A-A-------TCA----T--ATATA
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3464264 40 -   3747815 TTGATCATTTA-CTGCTGAATCTTTTACA---A-A-A-------TCA----T--ATATA
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         9479 40 +     66751 TTGATCGTTTA-CTGCTGAATCTTTTACA---A-A-A-------TCA----T--ATATA
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3883 18 -      8794 GT------------------------GCCC--A-A-A-------TCA----C--ATATA
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            117059 17 +    362372 CT------------------------ATAA--A----------GTCA----T--AGATA
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               7443 16 +     48152 AT------------------------GCAA--A-----------AGT----C--ATATA
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4483111 18 -  14209539 GT------------------------ATAC--A-A-A-------TCA----T--ATATA
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3949856 18 -   4490290 GT------------------------ACAA--A-A-A-------CCA----T--ATATA
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  48113 41 +     94413 TTGATCATTTATCTGCTGAATCTCTTACA---A-A-A-------TCA----C--ATATA
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_302224                             907 16 +      1516 AT------------------------GCAA--A-----------AGT----C--ATATG
i Nomascus_annamensis.k141_302224                       I 7 C 0
s Nomascus_concolor.k141_226614                               160 16 -      5092 AT------------------------GCAA--A-----------AGT----C--ATATG
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_642452                             943 16 +      2851 AT------------------------GCAA--A-----------AGT----C--ATATG
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_a.k141_595747                                  1581 16 +      4512 AT------------------------GCAA--A-----------AGT----C--ATATG
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                28556 18 +   3668941 GT------------------------ATGC--A-A-A-------TCA----T--ATATA
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65566044 16 -  95554990 GT------------------------ACAA--A-A-A-------TCA----C----ACA
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            2773 16 +      6470 GT------------------------ACAA--A-A-A-------TCA----C----ACA
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65668382 16 +  89412551 GT------------------------ACAA--A-A-A-------TCA----C----ACA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4994938 18 -  23139505 at------------------------ctaa--g-aC--------TTA----C--AAATA
i Ochotona_princeps.JH802095.1                          I 33 C 0
s Octodon_degus.JH651621.1                                3684483 18 +  10294119 AA------------------------GTAA--AGA---------TTA----C--ACACA
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             677756 18 -   3126709 GT------------------------ATAC--A-A-A-------TCA----T--ATATA
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1078543 18 +   1425656 Gt------------------------acaa--a---------aatca----c--atata
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         35839 18 +     78940 GT------------------------ACAA--A-A--------TTCA----C--ATAta
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  123957 16 +    145789 C-------------------------AGAG--C----------GTCA----A--AGTTA
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  35726 17 +     62360 AT------------------------ATAA--A----------GTCG----C--AGATA
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7223540 18 -   7562323 GT------------------------ACAA--A-A-A-------TCA----T--ACATA
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              43261 18 -     66828 AT------------------------GCCA--ACA---------TCA----T--ATATA
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141874524 18 + 163896628 AT------------------------CTAA--A-AC--------Tta----c--atata
i Oryctolagus_cuniculus.CM000803.1                      C 0 I 365
s Otocyon_megalotis.JAEUCK010005121.1                      305890 18 -    505867 GT------------------------ATGC--A-A-A-------TCA----T--ATATA
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       37940 18 +     38679 GT------------------------TCAA--A-A-A-------TCA----C--AGATA
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18007368 18 -  38779656 GT------------------------TCAA--A-A-A-------TGA----C--AGATA
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134076105 18 - 275406953 GT------------------------ACAA--A-A-A-------TCA----C--ATATA
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      77319 18 +    140051 GT------------------------ACAA--A-A-A-------TCA----C--ATATA
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127573592 16 - 205426864 AT------------------------GCAA--A-----------AGT----C--ATATA
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.NBAG03000771.1                           178888 16 +    210065 AT------------------------GCAA--A-----------TGT----C--ATATA
i Pan_troglodytes.NBAG03000771.1                        I 2201 I 123
s Panthera_onca.PanOnc_flattened_line_1615                  32572 18 +    295523 AT------------------------ACAC--A-A-A-------TCA----T--ATATA
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3636306 18 +  18214204 AT------------------------ACAC--A-A-A-------TCA----T--ATATA
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5025953 18 -   6340057 AT------------------------ACAC--A-A-A-------TCA----T--ATATA
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1064966 18 -   1292953 GT------------------------ACAA--A-A-A-------TCA----C--ATATA
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188155179 16 - 188283584 AT------------------------GCAA--A-----------AGT----C--ATATA
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             3496 16 +      5367 AT------------------------GCAA--A-----------AGT----C--ATATA
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47512567 16 +  47705337 AT------------------------GCAA--A-----------AGT----C--ATATA
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 66545 16 -    104429 AT------------------------GCAA--A-----------AGT----C--ATATA
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    5077 16 +     14967 AT------------------------GCAA--A-----------AGT----C--ATATA
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                  938 16 -      7628 AT------------------------GCAA--A-----------AGT----C--ATATA
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113888 18 -    135482 GT------------------------ACAC--A-A-A-------TCA----T--ATATA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           4357 18 -     23713 CT------------------------ACAA--A-A-A-------TCA----CATA--TA
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            23665 16 -     27972 GT------------------------ACAA--A-A-A-------TCA----C--A--TA
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      42518 18 -     45160 GT------------------------ACAG--C-A-A-------TCA----C--ATAAA
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4948914 17 -   8017169 at------------------------ataa--a----------gtca----C--AGATA
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    11147 18 -     36578 AC------------------------ATAA--A-A-A-------TCA----C--ATAGA
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            120157 18 -    122454 GT------------------------ACAA--A-A-A-------CCA----T--ATATA
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1987485                            965 16 -      5908 AT------------------------GCAA--A-----------AGT----C--ATATA
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       1585 16 -     17985 AT------------------------GCAA--A-----------AGT----C--ATATA
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                             952 16 +      7694 AT------------------------GCAA--A-----------AGT----C--ATATA
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26739430 16 +  26888534 AT------------------------GCAA--A-----------AGT----C--ATATA
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            96096 40 +    112873 TTGATCATTTA-CTGCGGAATCTTTTACA---A-A-A-------TCA----T--ATATA
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             42562 16 -     61926 AT------------------------GTAA--A-----------AGT----C--ATATA
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        23993 16 +     78826 AT------------------------GTAA--A-----------AGT----C--ATATA
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              7942 16 -     15800 AT------------------------GTAA--A-----------AGT----C--ATATA
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        11140 16 -     16101 AT------------------------GTAA--A-----------AGT----C--ATATA
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          4449 16 +      9673 AT------------------------GTAA--A-----------AGT----C--ATATA
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13473445 16 -  19735023 AT------------------------GTAA--A-----------AGT----C--ATATA
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           12351 16 -     31692 AT------------------------GTAA--A-----------AGT----C--ATATA
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           4225 18 +     21690 GT------------------------AGAA--A-A-A-------TCA----T--ACATA
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       21786 16 +     44506 AT------------------------GCAA--A-----------AGT----C--ATAGA
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        21998 16 +     67491 AT------------------------GCAA--A-----------AGT----C--ATAGA
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      12237 16 -     98129 AT------------------------GCAA--A-----------AGT----C--ATAGA
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     21837 16 +    147771 AT------------------------GCAA--A-----------AGT----C--ATAGA
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        22092 16 -     23762 AT------------------------GCAA--A-----------AGT----C--ATAGA
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          2558 16 -     55515 AT------------------------GCAA--A-----------AGT----C--ATAGA
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         21911 16 +    152463 AT------------------------GCAA--A-----------AGT----C--ATAGA
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      8671 16 +      8943 AT------------------------GCAA--A-----------AGT----C--ATAGA
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                         11633 16 +    134592 AT------------------------GCAA--A-----------AGT----C--ATAGA
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          22221 16 -     75465 AT------------------------GCAA--A-----------AGT----C--ATAGA
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              186117 16 -    373494 AT------------------------GCAA--A-----------AGT----C--ATATA
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19806765 16 +  19899266 AT------------------------GCAA--A-----------AGT----C--ATATA
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               4687 16 -     15069 AT------------------------GCAA--A-----------AGT----C--ATATA
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              4821 16 +     14865 AT------------------------GCAA--A-----------AGT----C--ATATA
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                76267 18 +     78963 GT------------------------GTCC--A-A-A-------TTA----C--ATATG
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6847478 18 +  12164890 GT------------------------ACAA--A-A-A-------TCG----C--ACATA
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    666700 18 -   2312742 AT------------------------GCAA--A-A-A-------TCG----C--ATGTA
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         2527 18 +     11805 GT------------------------ACAA--A-A-A-------TCG----C--ATGTA
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           41863 18 +     52369 GT------------------------ACAA--A-A-A-------TCG----C--ATGTA
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         34253 18 -     44753 GT------------------------ACAA--A-A-A-------TCG----C--ATGTA
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            16173 18 +     27322 GT------------------------ACAA--A-A-A-------TCG----C--ATGTA
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       15809 18 -     53241 GT------------------------ACAA--A-A-A-------TCG----C--ATATA
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         38081 18 -     48185 GT------------------------ACAA--A-A-A-------TAG----C--ATATA
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           32864 17 +     77221 aa------------------------gtaa--a----------gtca----C--AGACA
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            2674 41 -     27784 TTGATCATTTATCTGCTGCATCTCTTACA---A-A-A-------TCA----T--ATATA
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        244470 18 -    344369 GT------------------------GTAC--A-A-A-------TCA----T--ATATA
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13244817 18 -  17261082 GT------------------------ACAA--A-A-A-------GCA----T--ATATA
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             602767 18 -   3946241 GT------------------------ACAA--A-A-A-------GCA----T--ATATA
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131532535 18 - 161321710 AT------------------------ACAG--A-A-A-------TCA----T--ATATA
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             28805 16 +     56732 AT------------------------GCAA--A-----------AGT----C--ATATA
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6805296 16 +   6970761 AT------------------------GCAA--A-----------AGT----C--ATATA
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             4690 16 +     18040 AT------------------------GCAA--A-----------AGT----C--ATATA
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                14620 18 +     68503 GT------------------------ACAA--A-A-A-------TCA----C--ATATA
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13914237 17 +  90463843 at------------------------ataa--a----------gtca----C--AGATA
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1786627 18 +   2252614 gt------------------------acaa--a---------aatta----t--atata
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_1391695                            918 16 -      1866 AT------------------------GCAA--C-----------AGT----C--ATATA
i Rhinopithecus_bieti.k119_1391695                      C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206376575 16 - 206558726 AT------------------------GCAA--C-----------AGT----C--ATATA
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44855475 16 -  45163003 AT------------------------GCAA--C-----------AGT----C--ATATA
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                18107 18 +    109198 TT------------------------ACAA--A-A-A-------TCA----T--ATATA
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       6422 18 +     12214 GT------------------------ACAA--A-A-A-------TCA----C--ATATA
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15671650 16 -  43202129 at------------------------gcaa--a-----------aat----c--ataTA
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        3567 16 +     34089 AT------------------------GCAA--A-----------AAT----C--ATATA
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              3508 16 -     60842 AT------------------------GCAA--A-----------AAT----C--ATATA
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              3603 16 +     67014 AT------------------------GCAA--A-----------AAT----C--ATATA
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              3581 16 +     60816 AT------------------------GCAA--A-----------AAT----C--ATATA
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 3518 16 -     76454 AT------------------------GCAA--A-----------AAT----C--ATATA
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17340243 16 -  30362882 AT------------------------GCAA--A-----------AGT----C--ATATA
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         19602 16 -     62485 AT------------------------GCAA--A-----------AGT----C--ATATA
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   30196 18 -    114521 AT------------------------ACAA--A-A-A-------TCA----T--ACTTA
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        2302 16 +     15331 AT------------------------GCAA--A-----------AGT----C--ATATA
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       7699 16 +     20762 AT------------------------GCAA--A-----------AGT----C--ATATA
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         117697 16 +    130994 AT------------------------GCAA--A-----------AGT----C--ATATA
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           36488 16 +     46263 AT------------------------GCAA--A-----------AGT----C--ATATA
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     29602 16 +     42640 AT------------------------GCAA--A-----------AGT----C--ATATA
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        12646 16 +     30600 AT------------------------GCAA--A-----------AGT----C--ATATA
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   98497 17 -    120886 AG------------------------ATAA--A----------GTCA----A--AAAGG
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            16817 18 +    739146 GT------------------------ACAA--A-A-A-------TCA----T--ATAAA
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17749454 18 -  27805282 GT------------------------TCAG--A-A-A-------GTA----C--ATAAA
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2238696 18 +   2842873 GT------------------------ACAA--A-A-A-------TCA----C--ATATA
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             233221 18 -    276980 GT------------------------ATAC--A-A-A-------TCA----T--ATATA
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            25774 18 +     62062 GT------------------------ACAC--A-A-A-------TCA----T--ATATT
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189270700 18 + 218635234 GT------------------------ACAA--A-A-A-------TCA----T--TTGTA
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        13860 16 -  13920577 AT------------------------GCAA--A-----------AGT----C--ATATG
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               4842 41 -      6213 TTGATCATTTATCTGCTGAATCTTTTATA---A-A-A-------TCC----T--CTATC
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               13558 18 +     45698 GT------------------------GCCC--A-A-A-------TCA----C--ACATA
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      805551 22 +   1148477 GT------------------------ACAA--A-A-A-------TCATACAT--ATATA
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  56211 22 +     99546 GT------------------------ACAA--A-A-A-------TCATATAT--ACATA
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               25389 18 +     42269 GT------------------------ACAA--GGA---------ACA----C--ATATA
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               58705 18 +     65473 GT------------------------ACAA--G---------GGACA----C--ATATA
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194006706 16 - 194193292 AT------------------------GCAA--A-----------AGT----C--ATATA
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             38213 18 -     47444 AC------------------------ATGA--A-A--------GTCA----T--ATAGA
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  4415 18 +      6782 GT------------------------GGCA--G-A-A-------TCA----C--ATATA
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  134684 41 -    259118 TTGATCATTTATCTGCTAAATCTCTTACA---A-A-A-------TCA----T--ACATA
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        25809 16 +     38948 AT------------------------GCAA--A-----------AGT----C--ATATA
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   19536 16 -     32910 AT------------------------GCAA--A-----------AGT----C--ATATA
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                       923 16 -     12939 AT------------------------GCAA--A-----------AGT----C--ATATA
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                        858 16 -     14244 AT------------------------GCAA--A-----------AGT----C--ATATA
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           42256 16 -     54611 AT------------------------GCAA--A-----------AGT----C--ATATA
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_878600                        1086 16 +      1165 AT------------------------GCAA--A-----------AGT----C--ATATA
i Trachypithecus_germaini.k141_878600                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     2234 16 -     15592 AT------------------------GCAA--A-----------AGT----C--ATATA
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                           891 16 +     14371 AT------------------------GCAA--A-----------AGT----C--ATATA
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  50643 16 +     51589 AT------------------------GCAA--A-----------AGT----C--ATATA
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       13824 16 +     14732 AT------------------------GCAA--A-----------AGT----C--ATATA
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       4296 16 -     28054 AT------------------------GCAA--A-----------AGT----C--ATATA
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44659096 16 -  44834318 AT------------------------GCAA--A-----------AGT----C--ATATA
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       1399 16 +     13828 AT------------------------GCAA--A-----------AGT----C--ATATA
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   4006 11 +     90398 GT------------------------ACAA--A-A-A-------TC-------------
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 I 5
s Trichechus_manatus.JH594618.1                          16081405 18 +  31416278 GT------------------------GCCA--A-A-A-------TCA----C--ATATA
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2791706 18 -   3938065 TT------------------------ACAA--A-A-A-------TCA----T--GTACA
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    3974 18 +     13056 TT------------------------ACAA--A-A-A-------TCA----T--GTACA
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69312257 18 -  96451834 GT------------------------ACAA--A-A-A-------TCA----T--ACATA
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_139357                   717 18 +      2103 GT------------------------ACAC--A-A-A-------TCA----T--ATATA
i Uropsilus_gracilis.UroGra_scaffold_139357             C 0 C 0
s Ursus_maritimus.KK498671.1                              6513028  7 +  28682327 GT------------------------ATGC--A--------------------------
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  4182 18 -     20643 GT------------------------ACAA--C-A-A-------TCA----C--ACATA
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             23723 18 -     33872 GT------------------------ACAA--C-A-A-------TCA----C--ACATA
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1523495 18 -   2331223 GG------------------------ATAA--A---------GGTCA----T--ATTTA
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                135963 18 -    281493 GT------------------------ATGC--A-A-A-------TCA----T--ATATA
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       125799 18 -    134049 GT------------------------ACAA--A-A-A-------TAA----C--ATGTA
i Xerus_inauris.XerIna_scaffold_7898                    I 1 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        212491 18 -    227762 GT------------------------ATAC--A-A-A-------TCA----T--ATATA
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           5754 18 -      8775 GT------------------------ACAA--A-A-A-------TCA----T--ACATA
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Dinomys_branickii.DinBra_scaffold_1996                   156356 54 +    228994 I
e Elephantulus_edwardii.JH947210.1                        7804622 10712 +  15467074 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     14107 296 -     20485 I
e Hylobates_pileatus_a.tarseq_592                             33311  5 -     60944 I
e Nomascus_siki_b.tarseq_80                             24175  0 -  18771707 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               10862 5 +    209709 AACTT
s Acinonyx_jubatus.LLWD01000356.1                         2032212 5 +   3721120 ATCCC
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    111216 4 -    189883 ACCC-
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10655559 5 +  23371972 ATCAC
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7092484 5 -  16596857 ATCTC
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   11888 5 -     22067 ATCCT
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_3103728                   1464 5 +      1665 AACGT
i Allenopithecus_nigroviridis.k141_3103728              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                          940 5 -     29318 AACTT
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_21674                           1157 5 -      1421 AACTT
i Allochrocebus_preussi.k141_21674                      C 0 C 0
s Allochrocebus_solatus.k141_371672                           834 5 -     80423 AACTT
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             9127 5 -     18050 AACCT
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                 10217 5 -     11521 AACCT
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              9804 5 -     21359 AACCT
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_298055                                 1100 5 +      1823 AACCT
i Alouatta_juara.k141_298055                            C 0 C 0
s Alouatta_macconnelli.k141_1331706                          9100 5 -     10438 AACCT
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            5756 5 +      7047 AACCT
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             9036 5 +     10410 AACCT
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            2846 5 -      4927 AACCT
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             5775 5 +      6429 AACCT
i Alouatta_seniculus.k141_990213                        I 16 C 0
s Ammotragus_lervia.NIVO01013474.1                        3518982 5 +   4113121 ATCCT
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      389158 5 -    631301 ACCCT
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            29563 5 +     33004 ATCCT
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 61484 5 +     78111 AACCT
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            4425 5 +     22701 AACCT
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5748382 5 +   9889416 AACCT
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             4967 5 -    104377 AACCT
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               4973 5 +     23246 AACCT
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     2642 5 +      5067 ATCTT
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 I 2
s Arctocebus_calabarensis.k141_1161114                      17157 5 +     17483 ATACT
i Arctocebus_calabarensis.k141_1161114                  I 2 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 7559 5 -     29036 ACCCT
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9538232 5 +  39197703 AACTT
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             59503 5 +     85812 AACTT
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                10515 5 +     89302 AACTT
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             15020 5 -     58268 AACTT
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             63011 5 +    119057 AACTT
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               4980 5 -     25888 AACTT
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 5616 5 -     16375 ATACT
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              1936 5 +      2719 ATACT
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26378994 5 +  51448160 ATCTG
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        4226 5 -     13118 ATCTG
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   42044 5 -     72089 ATCCT
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6558075 5 +   6870073 Atcct
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138138314 5 - 161108492 ATCCT
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     570688 5 -    998990 ATCCT
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136294047 5 - 158972876 ATCCT
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1229802 5 -   1914593 atcct
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               112873 5 -    171031 AACCT
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 11901 5 +    125063 AACCT
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                13946 5 -    216513 AACCT
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        6486 5 -    134917 AACCT
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3218406 5 -   8989139 ACAGT
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           396111 5 -  15254737 ACAGT
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2971844 5 +   6889770 ACAGT
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11516935 5 +  39901454 ATCAC
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   11953 5 +     87036 ATCAC
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11263596 5 -  35597290 ATCAC
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11086125 5 +  39895921 ATCAC
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16453149 5 -  44759192 ATCAC
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21324058 5 + 157394656 ACCCT
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135705285 5 - 157403528 ACCCT
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_979108                   898 5 -      1248 ACACT
i Capromys_pilorides.CapPil_scaffold_979108             I 18 C 0
s Carlito_syrichta.NW_007248099.1                          307923 5 +    345090 AGCCT
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               58356 5 +     67245 ACCCT
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   29587 5 +     33760 ATCTC
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   157621 5 -    276539 ATCCT
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15785531 5 -  24422027 NNNNN
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15797465 5 -  24440124 GAATT
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       175656 5 +    436027 GAATT
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18889716 5 -  29618158 AACCT
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 7260 5 -     26817 AACCT
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                11500 5 +     25043 AACCT
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         6956 5 +     21754 AGCCT
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4362721 5 +   7569818 attat
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         2473 5 -      9338 ATTAT
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6554156 5 +   6739814 AACTT
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      25633 5 +     60454 AACTT
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                           838 5 -     21101 AACTT
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         58148 5 -    107033 AACTT
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        1040 5 -     17608 AACTT
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          28535 5 +     30494 AACTT
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          57381 5 -     59240 AGCTT
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          1082 5 +     16677 AACTT
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           23240 5 +     35983 AACTT
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11989768 5 +  12117833 AACTT
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46476526 5 +  46592721 AACTT
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      40077 5 -     45581 AACTT
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       1083 5 +     35577 AACTT
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                         859 5 -     25661 AACTT
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                         837 5 -     17744 AACTT
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        20446 5 +     37128 AACTT
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           1665 5 -      6963 ATCCA
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           57910 5 -     68416 ATACT
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            6953 5 +     13308 ATACT
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             4516 5 -     18223 AACCT
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             21539 5 +     25473 AACCT
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           40574 5 +     57117 AACCT
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          45253 5 +     54541 AACCT
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15960675 5 +  43084221 ATCTT
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         70075 5 +    196370 AACCT
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          14255 5 +     40510 AACCT
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15137999 5 -  15256731 AACTT
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      33046 5 -     53260 AACTT
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101143610 5 + 101219884 AACTT
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                15328 5 -     21363 ATCCT
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           760639 5 +    964067 ATCCT
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10885376 5 +  10971483 AACTT
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147663540 5 + 156195979 AACTT
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            15524 5 +     23629 AACTT
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60611471 5 +  78930452 atcct
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         38462 5 -     40477 ATTCT
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 277182 5 -    399297 GCCCT
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53027868 5 +  72327488 ATCCT
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             18514 5 -     19186 ATCCT
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            50227 5 -     70449 ATCCC
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  207088 5 -    956709 ATCCT
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 29660 5 -     67205 ACACT
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                16684 5 +     26546 ATCTT
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             57776 5 -    236241 ACATT
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          182499 5 -   6883506 agcca
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16843763 5 +  31942871 ATACT
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80035673 5 -  96802777 ATCTG
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18697665 5 -  18957592 ACCCC
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 321368 5 +    993696 attat
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   2020 5 +    151128 ATTAT
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dipodomys_ordii.KN672545.1                              3655072 5 +   4240102 ATCTT
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 26708 5 +     28912 ATCTT
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                35022 5 -     73477 ATATT
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22994109 5 -  44670279 GACCT
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 11034 5 +     24177 ATCCt
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1490331 5 +   1727528 ttcct
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        238425 5 -    369425 ATCCT
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           5535 5 -      7838 ATCCT
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85870012 5 +  99434291 ATCTC
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4703059 5 +   6522550 ATCCT
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5851786 5 -   7175178 ATTAT
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13350289 5 +  41866177 GTTAT
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          11779 5 +     92910 GTTAT
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11531339 5 +  16010500 Accct
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48770180 5 -  48907691 AACTT
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          313879 5 +    330699 ATCTG
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             60333 5 +     89355 ATCTG
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              3954 5 +     13586 ATACT
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               3891 5 -      6809 ATACT
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            10365 5 +     36558 ATACT
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             6683 5 +     60246 ATACT
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                10162 5 +    109717 ATACT
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               14545 5 +     16540 ATACT
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                14818 5 +     27497 ATACT
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           17275 5 +     26808 ATACT
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                32010 5 +     46535 ATACT
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              14732 5 -     29447 ATACT
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129891188 5 - 159252932 ATCCC
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129278260 5 - 158578461 ATCCC
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 19395 5 +     52776 ATCCC
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13891628 5 -  19261668 atctT
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     209862 5 -    847004 ATACC
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           12241 5 -     43889 ATACC
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           9310 5 +     27357 ATCCT
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               155204 5 +    324696 ATCCT
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    180131 5 -    189561 atcct
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           11794 5 -     18683 ATCTT
i Glis_glis.GliGli_scaffold_79770                       C 0 I 2
s Gorilla_beringei.k141_111300                               4248 5 -     14630 AACTT
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119651347 5 - 195582420 AACTT
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   76524 5 +    118900 ATCCT
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 I 2
s Hapalemur_alaotrensis.k141_1280836                          755 5 +     10286 ATACT
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_1254239                            8931 5 +      9690 ATACT
i Hapalemur_gilberti.k141_1254239                       C 0 C 0
s Hapalemur_griseus.k141_1387522                             4560 5 +     56096 ATACT
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        27810 5 -     42470 ATACT
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        44434 5 -     54384 ATACT
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              15435 5 +     53719 ATCCC
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                26329 5 -     91191 ATCCT
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2550014 5 +  31725842 aTCCT
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               56421 5 +     73687 ATCTG
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              145908 5 +    277961 ATCCT
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      277239 5 -    477199 attct
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              6398 5 -      9143 ATCCT
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      3648 5 -   7690867 AACTT
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 14530 5 -     67322 ATCCC
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           17902 5 -    119109 ATATT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              4074 5 +      5897 AACTT
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_624065                                938 5 +      2112 AACTT
i Hylobates_agilis.k141_624065                          C 0 C 0
s Hylobates_klossii.k141_466549                             10514 5 +     11537 AACTT
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14623619 5 -  25970782 AACTT
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                             875 5 -      2977 AACTT
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     5076 5 +     22540 ATCTT
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7124794 5 +  13083262 ATCTT
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 I 2
s Indri_indri.k141_4418183                                    377 5 -      1457 ATACT
i Indri_indri.k141_4418183                              I 5 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               7659 5 +     17520 ATCTG
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8564619 5 +  11848649 ATCCT
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               22493 5 +     37189 ATCTG
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          49096 5 -    147782 AACCT
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   112906 5 -    115756 ATCCT
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258406115 5 - 285822530 ATACT
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        22878 5 +     39228 ATACT
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            52253 5 +     63517 ATACT
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        77503 5 +    116806 ATACT
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     30517 5 -     33031 ATACT
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3084229 5 -   3498232 ATCAC
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    11883 5 +     22452 ATTCT
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            134826 5 +   3060487 ATCTG
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19247245 5 +  19376315 AACTT
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            9626 5 +     84689 ATACT
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3777375 5 +   6799190 ATACT
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20590961 5 -  62548349 ATCCT
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11085581 5 +  39895028 ATCAC
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             18985 5 +     74745 AACTT
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12705441 5 +  12821369 AACTT
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                1086 5 -      3136 AACTT
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           45903 5 +     63263 AACTT
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                  606 5 -      2568 AACTT
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 1192 5 -      7381 AACTT
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  44410 5 -     79256 AACTT
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196034518 5 + 196197964 AACTT
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11444685 5 +  11645122 AACTT
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   3357 5 -     46448 AACTT
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                1029 5 -     13212 AACTT
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 14709 5 -     55006 AACTT
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43839827 5 +  43892939 AACTT
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               15996 5 -     24607 AACTT
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               3362 5 -     27140 AACTT
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                700448 5 +    802869 ATCCT
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43436404 5 -  43563597 AACTT
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4449230 5 -   4543643 AACTT
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36872633 5 +  64221397 ATCTT
i Marmota_marmota.CZRN01000005.1                        C 0 I 2
s Megaderma_lyra.MegLyr_scaffold_3562                       63246 5 -    234502 ATTTT
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_146202             822 5 -      1999 ATCTC
i Mellivora_capensis.MelCap_flattened_line_146202       C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               11343 5 +     15977 ACATT
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1045606 5 -  26018355 ATCCT
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Microcebus_murinus.CM007691.1                          16509120 5 +  47401472 ATGCT
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_12817                  42392 5 -    101985 AACCT
i Microgale_talazaci.MicTal_scaffold_12817              I 81 n 5
s Micronycteris_hirsuta.MicHir_scaffold_37978               21541 5 -     32043 ACCCT
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22818715 5 -  98408828 AACCT
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8208532 5 +  10048721 ATcct
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            33188 5 +     45743 ATCCT
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                          957 5 +     29742 AACTT
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         9737 5 -    104932 ATCAC
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     4510 5 +      8497 ATACT
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 145261 5 +    154973 ATCTG
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                160049 5 +    265003 ATCCT
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 3433 5 -      4346 ATCCT
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  143126 5 -    168139 ATCCT
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          18422 5 -    100666 ATTCT
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70765212 5 +  92629107 ACCCT
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75488249 5 +  98207768 ACCCT
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67554491 5 +  89017189 ACCCT
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74329428 5 +  97876770 ACCCT
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             10505 5 +     98495 ATCCT
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 I 2
s Mustela_putorius.JH417978.1                             4422394 5 -  28371801 ATCTC
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     88963 5 -    117718 ATACT
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               966724 5 +   8389877 GTTCT
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5018400 5 +   6462685 GTTCT
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3464304 5 -   3747815 GTTCT
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         9519 5 +     66751 GTCCT
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3901 5 -      8794 ATCCT
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            117076 5 +    362372 GTCCT
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               7459 5 +     48152 AACTT
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4483129 5 -  14209539 ATCAC
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3949874 5 -   4490290 ATCTG
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  48154 5 +     94413 ATTCT
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_302224                             923 5 +      1516 AACTT
i Nomascus_annamensis.k141_302224                       C 0 C 0
s Nomascus_concolor.k141_226614                               176 5 -      5092 AACTT
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_642452                             959 5 +      2851 AACTT
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_a.k141_595747                                  1597 5 +      4512 AACTT
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                28574 5 +   3668941 ATCAC
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65566060 5 -  95554990 ATACT
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            2789 5 +      6470 ATACT
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65668398 5 +  89412551 ATACT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4994956 5 -  23139505 ATTCC
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3684501 5 +  10294119 ATACT
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             677774 5 -   3126709 ATCAC
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1078561 5 +   1425656 ttcct
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         35857 5 +     78940 atcct
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  123973 5 +    145789 ACCCT
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  35743 5 +     62360 GCCCC
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7223558 5 -   7562323 ATCTg
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              43279 5 -     66828 ATCCC
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141874907 5 + 163896628 atTCT
i Oryctolagus_cuniculus.CM000803.1                      I 365 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      305908 5 -    505867 ATCAC
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       37958 5 +     38679 ATACC
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18007386 5 -  38779656 ATACC
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134076123 5 - 275406953 ATCCT
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      77337 5 +    140051 ATCCT
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127573608 5 - 205426864 AACTT
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120150761 5 - 196562556 AACTT
i Pan_troglodytes.CM009241.2                            I 16 I 35
s Panthera_onca.PanOnc_flattened_line_1615                  32590 5 +    295523 ATCCC
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3636324 5 +  18214204 ATCCC
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5025971 5 -   6340057 ATCCC
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1064984 5 -   1292953 ATCCT
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188155195 5 - 188283584 AACTT
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             3512 5 +      5367 AACTT
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47512583 5 +  47705337 AACTT
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 66561 5 -    104429 AACTT
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    5093 5 +     14967 AACTT
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                  954 5 -      7628 AACTT
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113906 5 -    135482 CTCCC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           4375 5 -     23713 ATACT
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            23681 5 -     27972 ATACT
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      42536 5 -     45160 ATCTT
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4948931 5 -   8017169 ACCCC
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    11165 5 -     36578 ATCCt
i Petromus_typicus.PetTyp_scaffold_33007                C 0 I 271
s Phocoena_phocoena.PhoPho_flattened_line_11948            120175 5 -    122454 ATCTG
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1987485                            981 5 -      5908 AACTT
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       1601 5 -     17985 AACTT
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                             968 5 +      7694 AACTT
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26739446 5 +  26888534 AACTT
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            96136 5 +    112873 ATCCT
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             42578 5 -     61926 AACCT
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        24009 5 +     78826 AACCT
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              7958 5 -     15800 AACCT
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        11156 5 -     16101 AACCT
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          4465 5 +      9673 AACCT
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13473461 5 -  19735023 AACCT
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           12367 5 -     31692 AACCT
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           4243 5 +     21690 ATCTG
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       21802 5 +     44506 AACCT
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        22014 5 +     67491 AACCT
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      12253 5 -     98129 AACCT
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     21853 5 +    147771 AACCT
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        22108 5 -     23762 AACCT
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          2574 5 -     55515 AACCT
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         21927 5 +    152463 AACCT
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      8687 5 +      8943 AACCT
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                         11649 5 +    134592 AACCT
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          22237 5 -     75465 AACCT
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              186133 5 -    373494 AACGT
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19806781 5 +  19899266 AACGT
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               4703 5 -     15069 AACTT
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              4837 5 +     14865 AACTT
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                76285 5 +     78963 ATCTG
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6847496 5 +  12164890 ATACT
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    666718 5 -   2312742 ATACT
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         2545 5 +     11805 ATACT
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           41881 5 +     52369 ATACT
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         34271 5 -     44753 ATACT
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            16191 5 +     27322 ATACT
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       15827 5 -     53241 ATACT
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         38099 5 -     48185 ATACT
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           32881 5 +     77221 ACACT
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            2715 5 -     27784 ATCCT
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        244488 5 -    344369 ATCTC
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13244835 5 -  17261082 ATCCT
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             602785 5 -   3946241 ATCCT
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131532553 5 - 161321710 ATCCC
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             28821 5 +     56732 AATTT
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6805312 5 +   6970761 AATTT
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             4706 5 +     18040 AATTT
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                14638 5 +     68503 TTCCT
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13914254 5 +  90463843 ACCCT
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1786645 5 +   2252614 atctt
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_1391695                            934 5 -      1866 AACTT
i Rhinopithecus_bieti.k119_1391695                      C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206376591 5 - 206558726 AACTT
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44855491 5 -  45163003 AACTT
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                18125 5 +    109198 ATTCT
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       6440 5 +     12214 ATCCT
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15671666 5 -  43202129 AACCT
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        3583 5 +     34089 AACCT
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              3524 5 -     60842 AACCT
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              3619 5 +     67014 AACCT
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              3597 5 +     60816 AACCT
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 3534 5 -     76454 AACCT
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17340259 5 -  30362882 AACCT
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         19618 5 -     62485 AACCT
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   30214 5 -    114521 ATCCT
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        2318 5 +     15331 AACTT
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       7715 5 +     20762 AACTT
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         117713 5 +    130994 AACTT
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           36504 5 +     46263 AACTT
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     29618 5 +     42640 AACTT
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        12662 5 +     30600 AACTT
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   98514 5 -    120886 ACATT
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            16835 5 +    739146 ATCCT
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17749472 5 -  27805282 AGCCT
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2238714 5 +   2842873 ATCTT
i Spermophilus_dauricus.KZ294190.1                      C 0 I 2
s Spilogale_gracilis.SpiGra_flattened_line_905             233239 5 -    276980 ATCTT
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            25792 5 +     62062 ATCCC
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189270718 5 + 218635234 ATCCT
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        13876 5 -  13920577 AACTT
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               4883 5 -      6213 ATCCT
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               13576 5 +     45698 ATCCT
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      805573 5 +   1148477 ATTAT
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  56233 5 +     99546 ATTAT
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               25407 5 +     42269 AGCCT
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               58723 5 +     65473 AGCCT
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194006722 5 - 194193292 AACTT
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             38231 5 -     47444 ATCTT
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  4433 5 +      6782 ATCCA
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  134725 5 -    259118 ACACT
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        25825 5 +     38948 AACTT
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   19552 5 -     32910 AACTT
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                       939 5 -     12939 AACTT
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                        874 5 -     14244 AACTT
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           42272 5 -     54611 AACTT
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_878600                        1102 5 +      1165 AACTT
i Trachypithecus_germaini.k141_878600                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     2250 5 -     15592 AACTT
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                           907 5 +     14371 AACTT
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  50659 5 +     51589 AACTT
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       13840 5 +     14732 AACTT
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       4312 5 -     28054 AACTT
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44659112 5 -  44834318 AACTT
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       1415 5 +     13828 AACTT
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   4022 5 +     90398 ATCCT
i Tragulus_javanicus.TraJav_scaffold_14717              I 5 C 0
s Trichechus_manatus.JH594618.1                          16081423 5 +  31416278 ATCCT
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2791724 5 -   3938065 GTTCT
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    3992 5 +     13056 GTTCT
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69312275 5 -  96451834 ATCTg
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_139357                   735 5 +      2103 ACCCT
i Uropsilus_gracilis.UroGra_scaffold_139357             C 0 C 0
s Ursus_maritimus.KK498671.1                              6513035 5 +  28682327 ATCAC
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  4200 5 -     20643 ATACT
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             23741 5 -     33872 ATACT
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1523513 5 -   2331223 ATAGT
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                135981 5 -    281493 ATCAC
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       125817 5 -    134049 ATCTT
i Xerus_inauris.XerIna_scaffold_7898                    C 0 I 2
s Zalophus_californianus.ZalCal_flattened_line_4097        212509 5 -    227762 ATCAC
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           5772 5 -      8775 ATCTG
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Dinomys_branickii.DinBra_scaffold_1996                   156356 54 +    228994 I
e Manis_pentadactyla.KN017078.1                             35015 87 +     58827 I
e Manis_javanica.JSZB01003966.1                            144940 87 +    252755 I
e Elephantulus_edwardii.JH947210.1                        7804622 10712 +  15467074 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     14107 296 -     20485 I
e Hylobates_pileatus_a.tarseq_592                             33311 5 -     60944 I
e Nomascus_siki_b.tarseq_80                             24175 0 -  18771707 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               10867  7 +    209709 T-GA-G---ACA
s Acinonyx_jubatus.LLWD01000356.1                         2032217  7 +   3721120 T-G-AA---ACA
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    111220  7 -    189883 T-G-AA---ACA
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10655564  7 +  23371972 T-G-AA---ACA
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7092489  7 -  16596857 T-G-AA---ACA
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   11893  7 -     22067 --G-GA-A-ACA
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_3103728                   1469  7 +      1665 T-G-AG---ACA
i Allenopithecus_nigroviridis.k141_3103728              C 0 N 0
s Allochrocebus_lhoesti.k141_3566948                          945  7 -     29318 T-G-AG---ACA
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_21674                           1162  7 -      1421 T-G-AG---ACA
i Allochrocebus_preussi.k141_21674                      C 0 C 0
s Allochrocebus_solatus.k141_371672                           839  7 -     80423 T-G-AG---ACA
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             9132  7 -     18050 T-G-AG---ATA
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                 10222  7 -     11521 T-G-AG---ATA
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              9809  7 -     21359 T-G-AG---ATA
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_298055                                 1105  7 +      1823 T-G-AG---ATA
i Alouatta_juara.k141_298055                            C 0 C 0
s Alouatta_macconnelli.k141_1331706                          9105  7 -     10438 T-G-AG---ATA
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            5761  7 +      7047 T-G-AG---ATA
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             9041  7 +     10410 T-G-AG---ATA
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            2851  7 -      4927 T-G-AG---ATA
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             5780  7 +      6429 T-G-AG---ATA
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3518987  7 +   4113121 T-g-aa---aga
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      389163  7 -    631301 T-T-CA---ACA
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            29568  7 +     33004 T-G-AA---AGA
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 61489  7 +     78111 T-G-AG---AGA
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            4430  7 +     22701 T-G-AG---AGA
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5748387  7 +   9889416 T-G-AG---AGA
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             4972  7 -    104377 T-G-AG---AGA
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               4978  7 +     23246 T-G-AG---AGA
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     2649  4 +      5067 -----A---AGA
i Aplodontia_rufa.AprRuf_scaffold_156013                I 2 C 0
s Arctocebus_calabarensis.k141_1161114                      17162  7 +     17483 T-G-AA---ACA
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 7564  7 -     29036 T-T-AA---ACA
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9538237  7 +  39197703 T-G-AG---ATA
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             59508  7 +     85812 T-G-AG---ATA
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                10520  7 +     89302 T-G-AG---ATA
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             15025  7 -     58268 T-G-AG---ATA
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             63016  7 +    119057 T-G-AG---ATA
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               4985  7 -     25888 T-G-AG---ATG
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 5621  7 -     16375 T-G-AA---ACA
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              1941  7 +      2719 T-G-AA---ACA
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26378999  7 +  51448160 t-g-aa---aga
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        4231  7 -     13118 t-g-aa---aga
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   42049  7 -     72089 T-G-AA---AGA
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6558080  7 +   6870073 t-g-aa---ata
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138138319  7 - 161108492 T-G-aa---aga
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     570693  7 -    998990 T-G-aa---aga
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136294052  7 - 158972876 T-G-aa---aga
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1229807  7 -   1914593 t-g-aa---aga
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               112878  7 -    171031 T-G-AG---ATA
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 11906  7 +    125063 T-G-AG---ATA
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                13951  7 -    216513 T-G-AG---ATA
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        6491  7 -    134917 T-G-AG---ATA
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3218411  7 -   8989139 T-G-Aa---aca
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           396116  7 -  15254737 T-G-Aa---aca
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2971849  7 +   6889770 T-G-Aa---aca
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11516940  7 +  39901454 T-G-AA---ACA
i CanFam4.chr31                                         C 0 I 448
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   11958  7 +     87036 T-G-AA---ACA
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 I 455
s Canis_lupus_dingo.QKWQ01001993.1                       11263601  7 -  35597290 T-G-AA---ACA
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 I 452
s Canis_lupus_familiaris.chr31                           11086130  7 +  39895921 T-G-AA---ACA
i Canis_lupus_familiaris.chr31                          C 0 I 455
s Canis_lupus_orion.HG994411.1                           16453154  7 -  44759192 T-G-AA---ACA
i Canis_lupus_orion.HG994411.1                          C 0 I 450
s Capra_aegagrus.CM003214.1                              21324063  7 + 157394656 T-g-aa---aga
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135705290  7 - 157403528 T-G-aa---aga
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_979108                   903  7 -      1248 T-G-AA---CCA
i Capromys_pilorides.CapPil_scaffold_979108             C 0 C 0
s Carlito_syrichta.NW_007248099.1                          307928  7 +    345090 T-A-AA---GCA
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               58361  7 +     67245 T-G-AA---ACA
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   29592  7 +     33760 T-G-AA---ACC
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   157626  7 -    276539 T-G-AA---AGA
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15785536  7 -  24422027 N-N-NN---NNN
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15797470  7 -  24440124 T-G-AA---GTG
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       175661  7 +    436027 T-G-AA---GTG
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18889721  7 -  29618158 T-G-AG---ATG
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 7265  7 -     26817 T-G-AG---ATG
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                11505  7 +     25043 T-G-AG---ATG
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         6961  7 +     21754 T-A-AA---GCA
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4362726  7 +   7569818 c-G-AA---ACA
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         2478  7 -      9338 C-G-AA---ACA
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6554161  7 +   6739814 T-G-AG---ACA
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      25638  7 +     60454 T-G-AG---ACA
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                           843  7 -     21101 T-G-AG---ACA
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         58153  7 -    107033 T-G-AG---ACA
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        1045  7 -     17608 T-G-AG---ACA
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          28540  7 +     30494 T-G-AG---ACA
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          57386  7 -     59240 T-G-AG---ACA
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          1087  7 +     16677 T-G-AG---ACA
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           23245  7 +     35983 T-G-AG---ACA
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11989773  7 +  12117833 T-G-AG---ACA
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46476531  7 +  46592721 T-G-AG---ACA
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      40082  7 -     45581 T-G-AG---ACA
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       1088  7 +     35577 T-G-AG---ACA
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                         864  7 -     25661 T-G-AG---ACA
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                         842  7 -     17744 T-G-AG---ACA
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        20451  7 +     37128 T-G-AG---ACC
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           1670  7 -      6963 T-A-AA---ATA
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 I 2
s Cheirogaleus_major.k141_1157592                           57915  7 -     68416 T-G-AA---ACA
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            6958  7 +     13308 T-G-AA---ACA
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             4521  7 -     18223 T-G-AG---ATA
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             21544  7 +     25473 T-G-AG---ATA
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           40579  7 +     57117 T-G-AG---ATA
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          45258  7 +     54541 T-G-AG---ATA
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15960680  7 +  43084221 T-G-AA---GCA
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         70080  7 +    196370 T-G-AG---ATA
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          14260  7 +     40510 T-G-AG---ATA
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15138004  7 -  15256731 T-G-AG---ACA
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      33051  7 -     53260 T-G-AG---ACA
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101143615  7 + 101219884 T-G-AG---ACA
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                15333  7 -     21363 T-C-AA---ATG
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 I 2
s Choloepus_hoffmanni.KN194586.1                           760644  7 +    964067 T-C-AA---ATG
i Choloepus_hoffmanni.KN194586.1                        C 0 I 2
s Colobus_angolensis.KN985967.1                          10885381  7 +  10971483 T-G-AG---ACA
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147663545  7 + 156195979 T-G-AG---ACA
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            15529  8 +     23629 TTG-AG---ACA
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60611476  7 +  78930452 c-a-ta---ata
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         38467  7 -     40477 T-G-AA---ACA
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 277187  7 -    399297 T-G-AA---ACA
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53027873  7 +  72327488 T-G-GA---ACA
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             18519 10 -     19186 T-G-AATACCTG
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            50232  7 -     70449 T-G-AA---ACA
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  207093  7 -    956709 G-G-AA---ACA
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 29665  7 -     67205 T-G-AA---CCA
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                16689  7 +     26546 T-G-AA---GTA
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             57781  7 -    236241 T-G-AA---GTA
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          182504  7 -   6883506 t-a-aa---atg
i Dasypus_novemcinctus.JH568778.1                       C 0 I 2
s Daubentonia_madagascariensis.ctg11                     16843768  7 +  31942871 T-G-AA---ACA
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80035678  7 -  96802777 t-g-aa---aga
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18697670  7 -  18957592 T-T-AA---ACA
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 321373  7 +    993696 C-G-AA---ACA
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   2025  7 +    151128 C-G-AA---ACA
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dipodomys_ordii.KN672545.1                              3655077  7 +   4240102 T-G-AG---ATA
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 26713  5 +     28912 T-G-AG---A--
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                35027  7 -     73477 T-G-AA---GTG
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22994114  7 -  44670279 T-G-AA---AGA
i Echinops_telfairi.JH980316.1                          C 0 I 2
s Eidolon_helvum.KE772537.1                                 11039  7 +     24177 t-g-aa---aca
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1490336  7 +   1727528 t-g-aa---aga
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        238430  7 -    369425 T-G-AA---ACA
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           5540  7 -      7838 T-G-AA---ACA
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85870017  7 +  99434291 T-G-AA---ACA
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4703064  7 +   6522550 T-G-AA---ACC
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5851791  7 -   7175178 T-G-AA---ACA
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13350294  7 +  41866177 T-G-AA---ACA
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          11784  7 +     92910 T-G-AA---ACA
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11531344  7 +  16010500 t-a-aa---ata
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48770185  7 -  48907691 T-G-AG---ACA
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          313884  7 +    330699 T-G-AA---AGA
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             60338  7 +     89355 T-G-AA---AGA
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              3959  7 +     13586 T-G-AA---ACA
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               3896  7 -      6809 T-G-AA---ACA
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            10370  7 +     36558 T-G-AA---AAA
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             6688  7 +     60246 T-G-AA---ACA
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                10167  7 +    109717 T-G-AA---ACA
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               14550  7 +     16540 T-G-AA---ACA
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                14823  7 +     27497 T-G-AA---ACA
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           17280  7 +     26808 T-G-AA---ACA
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                32015  7 +     46535 T-G-AA---ACA
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              14737  7 -     29447 T-G-AA---ACA
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129891193  7 - 159252932 T-G-AA---ACA
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129278265  7 - 158578461 T-G-AA---ACA
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 19400  7 +     52776 T-G-AA---ACA
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13891633  7 -  19261668 T-G-AA---GCA
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     209867  7 -    847004 T-G-AA---ACA
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           12246  7 -     43889 T-G-AA---ACA
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           9315  6 +     27357 --G-AA---ACA
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               155209  7 +    324696 T-G-AA---ACA
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    180136  7 -    189561 t-g-aa---aga
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           11801  4 -     18683 -----A---ATA
i Glis_glis.GliGli_scaffold_79770                       I 2 C 0
s Gorilla_beringei.k141_111300                               4253  6 -     14630 T-G--G---ACA
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119651352  6 - 195582420 T-G--G---ACA
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   76531  4 +    118900 -----A---ATA
i Graphiurus_murinus.GraMur_scaffold_4493               I 2 C 0
s Hapalemur_alaotrensis.k141_1280836                          760  7 +     10286 T-G-AA---ACA
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_1254239                            8936  7 +      9690 T-G-AA---ACA
i Hapalemur_gilberti.k141_1254239                       C 0 C 0
s Hapalemur_griseus.k141_1387522                             4565  7 +     56096 T-G-AA---ACA
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        27815  7 -     42470 T-G-AA---ACA
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        44439  7 -     54384 T-G-AA---ACA
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              15440  7 +     53719 T-G-AA---ATA
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                26334  7 -     91191 T-G-AA---AGA
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2550019  7 +  31725842 T-G-AA---GAA
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               56426  7 +     73687 T-G-AA---ATT
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 I 2
s Hippopotamus_amphibius.HipAmp_scaffold_1308              145913  7 +    277961 T-G-AA---AGA
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      277244  7 -    477199 t-g-aa---aca
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              6403  7 -      9143 T-G-AA---ACA
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      3653  7 -   7690867 T-G-AG---ACA
i Hoolock_leuconedys.ctg79                                 C 0 I 29
s Hyaena_hyaena.HyaHya_flattened_line_20729                 14535  7 -     67322 T-G-AA---ACA
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           17907  7 -    119109 T-G-AA---GTG
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              4079  7 +      5897 T-G-AG---ACA
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_624065                                943  7 +      2112 T-G-AG---ACA
i Hylobates_agilis.k141_624065                          C 0 C 0
s Hylobates_klossii.k141_466549                             10519  7 +     11537 T-G-AG---ACA
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14623624  7 -  25970782 T-G-AG---ACA
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                             880  7 -      2977 T-G-AG---ACA
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     5081  7 +     22540 T-A-AA---ACA
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7124801  4 +  13083262 -----A---ACA
i Ictidomys_tridecemlineatus.JH393315.1                 I 2 C 0
s Indri_indri.k141_4418183                                    382  7 -      1457 T-G-AA---ACA
i Indri_indri.k141_4418183                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               7664  7 +     17520 T-G-GA---AGA
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8564624  7 +  11848649 --G-AA-A-ACA
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               22498  7 +     37189 T-G-AA---AGA
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          49101  7 -    147782 T-G-AG---ATA
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   112911  7 -    115756 T-A-AA---ACC
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258406120  7 - 285822530 T-G-AA---ACA
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        22883  7 +     39228 T-G-AA---ACA
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            52258  7 +     63517 T-G-AA---ACA
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        77508  7 +    116806 C-G-AA---ACA
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     30522  7 -     33031 T-G-AA---ACA
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3084234  7 -   3498232 T-G-AA---ACA
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    11888  7 +     22452 T-A-GA---ATA
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            134831  7 +   3060487 t-g-aa---aga
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19247250  7 +  19376315 T-G-AG---ACA
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            9631  7 +     84689 A-G-AA---ACA
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3777380  7 +   6799190 A-G-AA---ACA
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20590966  7 -  62548349 T-G-AA---ACA
i Loxodonta_africana.GL010040.1                         C 0 I 2
s Lycaon_pictus.CM007556.1                               11085586  7 +  39895028 T-G-AA---ACA
i Lycaon_pictus.CM007556.1                              C 0 I 455
s Macaca_arctoides.k141_2201161                             18990  7 +     74745 T-G-AG---ACA
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12705446  7 +  12821369 T-G-AG---ACA
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                1091  7 -      3136 T-G-AG---ACA
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           45908  7 +     63263 T-G-AG---ACA
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                  611  7 -      2568 T-G-AG---ACA
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 1197  7 -      7381 T-G-AG---ACA
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  44415  7 -     79256 T-G-AG---ACA
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196034523  7 + 196197964 T-G-AG---ACA
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11444690  7 +  11645122 T-G-AG---ACA
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   3362  7 -     46448 T-G-AG---ACA
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                1034  7 -     13212 T-G-AG---ACA
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 14714  7 -     55006 T-G-AG---ACA
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43839832  7 +  43892939 T-G-AG---ACA
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               16001  7 -     24607 T-G-AG---ACA
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               3367  7 -     27140 T-G-AG---ACA
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                700453  7 +    802869 T-G-AA---ACT
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43436409  7 -  43563597 T-G-AG---ACA
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4449235  7 -   4543643 T-G-AG---GCA
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36872640  4 +  64221397 -----A---ACA
i Marmota_marmota.CZRN01000005.1                        I 2 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       63251  7 -    234502 T-G-AA---ACA
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_146202             827  7 -      1999 T-G-AA---ACA
i Mellivora_capensis.MelCap_flattened_line_146202       C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               11348  7 +     15977 T-G-AA---ATA
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1045611  7 -  26018355 T-G-AA---ACA
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Microcebus_murinus.CM007691.1                          16509125  7 +  47401472 T-G-AA---ACA
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  30543  7 -     48017 T-G-AA---ACA
i Microgale_talazaci.MicTal_scaffold_34660              I 5 I 2
s Micronycteris_hirsuta.MicHir_scaffold_37978               21546  7 -     32043 T-T-AA---ACA
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22818720  7 -  98408828 T-G-AA---ACA
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8208537  7 +  10048721 t-a-aa---aca
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            33193  7 +     45743 T-G-AA---ACA
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                          962  7 +     29742 T-G-AG---ACA
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         9742  7 -    104932 T-G-AA---ACA
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     4515  7 +      8497 T-G-AA---ACA
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 145266  7 +    154973 T-G-AA---AGA
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                160054  7 +    265003 T-T-AA---ACA
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 3438  7 -      4346 T-G-AA---AGA
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  143131  7 -    168139 T-G-AA---ATA
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          18427  7 -    100666 T-A-AA---ACC
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70765217  7 +  92629107 T-G-AA---ACA
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75488254  7 +  98207768 T-G-AA---ACA
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67554496  7 +  89017189 T-G-AA---ACA
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74329433  7 +  97876770 T-G-AA---ACA
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             10512  4 +     98495 -----T---TAA
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 2 C 0
s Mustela_putorius.JH417978.1                             4422399  7 -  28371801 T-G-AA---ACA
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     88968  7 -    117718 T-G-AA---CCA
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               966729  7 +   8389877 T-G-AA---ACC
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5018405  7 +   6462685 T-G-AA---ACC
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3464309  7 -   3747815 T-G-AA---ACC
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         9524  7 +     66751 T-G-AA---ACC
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3906  7 -      8794 T-A-AA---ATG
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 I 2
s Nannospalax_galili.KL201303.1                            117081  7 +    362372 T-G-AA---ACA
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               7464  7 +     48152 T-G-AG---ACA
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4483134  7 -  14209539 T-G-AA---ACA
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3949879  7 -   4490290 t-g-aa---aga
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  48159  7 +     94413 T-T-CA---ATA
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_302224                             928  7 +      1516 T-G-AG---ACA
i Nomascus_annamensis.k141_302224                       C 0 I 22
s Nomascus_concolor.k141_226614                               181  7 -      5092 T-G-AG---ACA
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_642452                             964  7 +      2851 T-G-AG---ACA
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_a.k141_595747                                  1602  7 +      4512 T-G-AG---ACA
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                28579  7 +   3668941 T-G-AA---ACA
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 I 494
s Nycticebus_bengalensis.LG16                            65566065  7 -  95554990 A-G-AA---ACA
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            2794  7 +      6470 A-G-AA---ACA
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65668403  7 +  89412551 A-G-AA---ACA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4994961  7 -  23139505 T-A-GA---ACA
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3684506  7 +  10294119 T-G-GA---CCA
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             677779  7 -   3126709 T-G-AA---ACA
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1078566  7 +   1425656 t-g-aa---aga
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         35862  7 +     78940 t-g-aa---aga
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  123978  7 +    145789 T-G-AA---ACA
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  35748  7 +     62360 T-G-AA---ACA
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7223563  7 -   7562323 t-g-aa---aga
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              43284  7 -     66828 T-G-AA---AGA
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 I 2
s Oryctolagus_cuniculus.CM000803.1                      141874912  7 + 163896628 T-A-GA---ATA
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      305913  7 -    505867 T-G-AA---ACA
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 I 445
s Otolemur_crassicaudatus.k141_321880                       37963  7 +     38679 T-G-AA---ACA
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18007391  7 -  38779656 T-G-AA---ACA
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134076128  7 - 275406953 T-g-aa---aga
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      77342  7 +    140051 T-G-AA---AGA
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127573613  6 - 205426864 T-G--G---ACA
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.NBAG03003562.1                            12074  7 +     18198 T-GA-G---ACA
i Pan_troglodytes.NBAG03003562.1                        I 1654 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  32595  7 +    295523 T-G-AA---ACA
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3636329  7 +  18214204 T-G-AA---ACA
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5025976  7 -   6340057 T-G-AA---ACA
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1064989  7 -   1292953 T-g-aa---aga
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188155200  7 - 188283584 T-G-AG---ACA
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             3517  7 +      5367 T-G-AG---ACA
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47512588  7 +  47705337 T-G-AG---ACA
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 66566  7 -    104429 T-G-AG---ACA
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    5098  7 +     14967 T-G-AG---ACA
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                  959  7 -      7628 T-G-AG---ACA
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113911  7 -    135482 T-G-AA---ACA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           4380  7 -     23713 T-G-AA---ACA
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            23686  7 -     27972 T-A-AA---ACA
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      42541  7 -     45160 G-G-AG---ACC
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4948936  7 -   8017169 T-G-AA---ACA
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    11441  7 -     36578 t-g-aa---aca
i Petromus_typicus.PetTyp_scaffold_33007                I 271 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            120180  7 -    122454 T-G-AA---AGA
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1987485                            986  7 -      5908 T-G-AG---ACA
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       1606  7 -     17985 T-G-AG---ACA
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                             973  7 +      7694 T-G-AG---ACA
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26739451  7 +  26888534 T-G-AG---ACA
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            96141  7 +    112873 T-G-AA---ACC
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             42583  7 -     61926 A-G-AG---ATA
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        24014  7 +     78826 A-G-AG---ATA
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              7963  7 -     15800 A-G-AG---ATA
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        11161  7 -     16101 A-G-AG---ATA
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          4470  7 +      9673 A-G-AG---ATA
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13473466  7 -  19735023 A-G-AG---ATA
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           12372  7 -     31692 A-G-AG---ATA
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           4248  7 +     21690 T-G-AA---AGA
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       21807  7 +     44506 T-G-AG---ATA
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        22019  7 +     67491 T-G-AG---ATA
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      12258  7 -     98129 T-G-AG---ATA
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     21858  7 +    147771 T-G-AG---ATA
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        22113  7 -     23762 T-G-AG---ATA
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          2579  7 -     55515 T-G-AG---ATA
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         21932  7 +    152463 T-G-AG---ATA
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      8692  7 +      8943 T-G-AG---ATA
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                         11654  7 +    134592 T-G-AG---ATA
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          22242  7 -     75465 T-G-AG---ATA
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              186138  6 -    373494 T-G--G---ACA
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19806786  6 +  19899266 T-G--G---ACA
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               4708  7 -     15069 T-G-AG---ACA
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              4842  7 +     14865 T-G-AG---ACA
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                76290  7 +     78963 T-G-AA---ATT
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 I 2
s Prolemur_simus.MPIZ01000048.1                           6847501  7 +  12164890 T-G-AA---ACA
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    666723  7 -   2312742 T-G-AA---ACA
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         2550  7 +     11805 T-G-AA---ACA
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           41886  7 +     52369 T-G-AA---ACA
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         34276  7 -     44753 T-G-CA---ACA
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            16196  7 +     27322 T-G-AA---ACA
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       15832  7 -     53241 T-G-AA---ACA
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         38104  7 -     48185 T-G-AA---ACA
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           32886  7 +     77221 T-G-AA---ATA
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            2720  7 -     27784 T-T-AA---Agg
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        244493  7 -    344369 T-G-AA---ACA
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13244840  7 -  17261082 T-g-aa---aca
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             602790  7 -   3946241 T-g-aa---aca
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131532558  7 - 161321710 T-G-AA---ACA
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             28826  7 +     56732 T-G-AG---ACA
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6805317  7 +   6970761 T-G-AG---ACA
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             4711  7 +     18040 T-G-AG---ACA
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                14643  7 +     68503 T-G-AA---AGA
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13914259  7 +  90463843 G-G-GA---ACA
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1786650  7 +   2252614 t-t-aa---aca
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_1391695                            939  7 -      1866 T-G-AG---ACA
i Rhinopithecus_bieti.k119_1391695                      C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206376596  7 - 206558726 T-G-AG---ACA
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44855496  7 -  45163003 T-G-AG---ACA
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                18130  7 +    109198 T-G-AA---ACA
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       6445  7 +     12214 T-G-AA---AGA
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15671671  7 -  43202129 T-G-AA---ATA
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        3588  7 +     34089 T-G-AA---ATA
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              3529  7 -     60842 T-G-AA---ATA
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              3624  7 +     67014 T-G-AA---ATA
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              3602  7 +     60816 T-G-AA---ATA
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 3539  7 -     76454 T-G-AA---ATA
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17340264  7 -  30362882 T-G-AG---ATG
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         19623  7 -     62485 T-G-AG---ATG
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   30219  7 -    114521 C-A-CA---ATA
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        2323  7 +     15331 T-G-AG---ACA
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       7720  7 +     20762 T-G-AG---ACA
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         117718  7 +    130994 T-G-AG---ACA
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           36509  7 +     46263 T-G-AG---ACA
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     29623  7 +     42640 T-G-AG---ACA
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        12667  7 +     30600 T-G-AG---ACA
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   98519  7 -    120886 T-G-AG---AGA
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            16840  6 +    739146 T-G-CA----TA
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17749477 10 -  27805282 G-A-AAtcctta
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2238721  4 +   2842873 -----A---ACA
i Spermophilus_dauricus.KZ294190.1                      I 2 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             233244  7 -    276980 T-G-GA---ACA
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            25797  7 +     62062 T-G-AA---ATA
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189270723  7 + 218635234 T-G-AA---AGA
i Sus_scrofa.CM000824.4                                 C 0 I 16
s Symphalangus_syndactylus.tarseq_24                        13881  7 -  13920577 T-G-AG---ACA
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               4888  7 -      6213 T-G-AA---ACA
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               13581  7 +     45698 T-A-AA---ATA
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 I 2
s Tapirus_indicus.TapInd_scaffold_176                      805578  7 +   1148477 T-G-AA---ACA
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  56238  7 +     99546 T-G-AA---ACA
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               25412  7 +     42269 T-A-AA---GCA
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               58728  7 +     65473 T-A-AA---GCA
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194006727  7 - 194193292 T-G-AG---ACA
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             38236  7 -     47444 T-G-AA---GCA
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  4438  7 +      6782 T-A-AA---ATG
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 I 2
s Tonatia_saurophila.TonSau_scaffold_3334                  134730  7 -    259118 T-T-AA---ACA
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        25830  7 +     38948 T-G-AG---ACA
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   19557  7 -     32910 T-G-AG---ACA
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                       944  7 -     12939 T-G-AG---ACA
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                        879  7 -     14244 T-G-AG---ACA
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           42277  7 -     54611 T-G-AG---ACA
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_878600                        1107  7 +      1165 T-G-AG---ACA
i Trachypithecus_germaini.k141_878600                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     2255  7 -     15592 T-G-AG---ACA
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                           912  7 +     14371 T-G-AG---ACA
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  50664  7 +     51589 T-G-AG---ACA
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       13845  7 +     14732 T-G-AG---ACA
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       4317  7 -     28054 T-G-AG---ACA
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44659117  7 -  44834318 T-G-AG---ACA
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       1420  7 +     13828 T-G-AG---ACA
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   4027  7 +     90398 T-G-AA---AGA
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16081428  7 +  31416278 T-G-GA---ACA
i Trichechus_manatus.JH594618.1                         C 0 I 2
s Tupaia_chinensis.KB320831.1                             2791729  7 -   3938065 T-G-AA---ACA
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    3997  7 +     13056 T-G-AA---ACA
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69312280  7 -  96451834 t-g-aa---aga
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_139357                   740  7 +      2103 T-G-AA---ATA
i Uropsilus_gracilis.UroGra_scaffold_139357             C 0 C 0
s Ursus_maritimus.KK498671.1                              6513040  7 +  28682327 T-G-AA---ACA
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  4205  7 -     20643 T-G-AA---ACA
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             23746  7 -     33872 T-G-AA---ACA
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1523518  7 -   2331223 T-G-AA---ACA
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                135986  7 -    281493 T-G-AA---ACA
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 I 456
s Xerus_inauris.XerIna_scaffold_7898                       125824  4 -    134049 -----A---ACA
i Xerus_inauris.XerIna_scaffold_7898                    I 2 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        212514  7 -    227762 T-G-AA---ACA
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           5777  7 -      8775 T-G-AA---AGA
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Dinomys_branickii.DinBra_scaffold_1996                   156356 54 +    228994 I
e Manis_pentadactyla.KN017078.1                             35015 87 +     58827 I
e Manis_javanica.JSZB01003966.1                            144940 87 +    252755 I
e Elephantulus_edwardii.JH947210.1                        7804622 10712 +  15467074 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     14107 296 -     20485 I
e Hylobates_pileatus_a.tarseq_592                             33311  5 -     60944 I
e Nomascus_siki_b.tarseq_80                             24175  0 -  18771707 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               10874 29 +    209709 AAGTTAGCG-------------TCT------TAT-ACG-GT-AC-G-T----TCAGA
s Acinonyx_jubatus.LLWD01000356.1                         2032224 30 +   3721120 AAATAAGCT-------------TTT------TAC-ATG-GT-AT-GCT----TCAGC
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    111227 29 -    189883 GAAATAGTC-------------TGC------TAC-TAC--A-GTAG-T----TTGGC
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10655571 30 +  23371972 AAAGTAGCT-------------TTC------TAT-ATG-GT-GT-GAt----tcagg
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7092496 30 -  16596857 AAAGTAGCT-------------TTC------TAG-ATG-AT-GT-GAT----TCAGG
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   11900 27 -     22067 GAGATCCCT-------------TC-------TGC-CTG-GT-GT-G-T----TTGA-
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                    233 29 -     60446 AAGTTAGTT-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Allenopithecus_nigroviridis.k141_2469532              N 0 C 0
s Allochrocebus_lhoesti.k141_3566948                          952 29 -     29318 AAGTTAGTT-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_21674                           1169 29 -      1421 AAGTTAGTT-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Allochrocebus_preussi.k141_21674                      C 0 C 0
s Allochrocebus_solatus.k141_371672                           846 29 -     80423 AAGTTAGTT-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             9139 29 -     18050 AAGTTAGCT-------------TCT------TAT-ACA-GT-GT-G-T----TCAGA
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                 10229 29 -     11521 AATTTAGCT-------------TCT------TAT-ACA-GT-GT-G-T----TCAGA
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              9816 29 -     21359 AAGTTAGCT-------------TCT------TAT-ACA-GT-GT-G-T----TCAGA
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_298055                                 1112 29 +      1823 AAGTTAGCT-------------TCT------TAT-ACA-GT-GT-G-T----TCAGA
i Alouatta_juara.k141_298055                            C 0 C 0
s Alouatta_macconnelli.k141_1331706                          9112 29 -     10438 AAGTTAGCT-------------TCT------TAT-ACA-GT-GT-G-T----TCAGA
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            5768 29 +      7047 AAGTTAGCT-------------TCT------TAT-ACA-GT-GT-G-T----TCAGA
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             9048 29 +     10410 AAGTTAGCT-------------TCT------TAT-ACA-GT-GT-G-T----TCAGA
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            2858 29 -      4927 AAGTTAGCT-------------TCT------TAT-ACA-GT-GT-G-T----TCAGA
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             5787 29 +      6429 AAGTTAGCT-------------TCT------TAT-ACA-GT-GT-G-T----TCAGA
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3518994 30 +   4113121 atattaata-------------ttt------tac-atg-gT-GA-GCT----TCAGG
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      389170 30 -    631301 AAATTACCT-------------TTT------TAT-ATG-GC-AT-GCT----CCAGG
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            29575 30 +     33004 AAATTAATA-------------TTT------TAT-ATG-GT-GA-GCT----TCAGG
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 61496 29 +     78111 AAGTTTACT-------------TCT------TAT-ATA-GT-GT-G-T----TCAGA
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            4437 29 +     22701 AAGTTTACT-------------TCT------TAT-ATA-GT-GT-G-T----TCAGA
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5748394 29 +   9889416 AAGTTTACT-------------TCT------TAT-ATA-GT-GT-G-T----TCAGA
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             4979 29 -    104377 AAGTTTACT-------------TCT------TAT-ATA-GT-GT-G-T----TCAGA
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               4985 29 +     23246 AAGTTTACT-------------TCT------TAT-ATA-GT-GT-G-T----TCAGA
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     2653 28 +      5067 AAGGTAACT-------------TCT------TAC-ATG-G--GT-G-T----TCAGG
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 I 8
s Arctocebus_calabarensis.k141_1161114                      17169 29 +     17483 AAGGTGGCT-------------TTT------CAC-ATG-GG-GT-G-T----TCAGG
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 7571 29 -     29036 AAATTACCT--------------TT------TAT-ATG-GC-GT-GCT----CCAGG
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9538244 29 +  39197703 AAGTTAGCT-------------TCT------TAT-ACA-GT-GT-G-T----TCAGA
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             59515 29 +     85812 AAGTTAGCT-------------TCT------TAT-ACA-GT-GT-G-T----TCAGA
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                10527 29 +     89302 AAGTTAGCT-------------TCT------TAT-ACA-GT-GT-G-T----TCAGA
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             15032 29 -     58268 AAGTTAGCT-------------TCT------TAT-ACA-GT-GT-G-T----TCAGA
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             63023 29 +    119057 AAGTTAGCT-------------TCT------TAT-ACA-GT-GT-G-T----TCAGA
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               4992 29 -     25888 AAGTTAGCT-------------TCT------TAT-ACA-GT-GT-G-T----TCAGA
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 5628 29 -     16375 AATGTAGCT-------------TTT------CAC-ATG-GT-GT-G-T----TCCGG
i Avahi_laniger.k141_2840928                            C 0 I 6
s Avahi_peyrierasi.k141_2689020                              1948 29 +      2719 AATGTAGCT-------------TTT------CAC-ATG-GT-GT-G-T----TCCGG
i Avahi_peyrierasi.k141_2689020                         C 0 I 6
s Balaenoptera_acutorostrata.KI537095.1                  26379006 30 +  51448160 aaactaata-------------ttt------tac-ATG-GT-GA-GCT----TCAGG
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        4238 30 -     13118 aaactaata-------------ttt------taC-ATG-GT-GA-GCT----TCAGG
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   42056 30 -     72089 ATATTAATA-------------TTT------TAC-ATG-CT-GA-GCT----TCAGG
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6558087 30 +   6870073 aaattaata-------------ttt------tac-atg-GT-GA-GCT----TTAgg
i Bison_bison.KN264915.1                                C 0 I 281
s Bos_indicus.CM003021.1                                138138326 30 - 161108492 taattaata-------------ttt------tac-atg-GT-GA-GCT----TTAgg
i Bos_indicus.CM003021.1                                C 0 I 268
s Bos_mutus.JH883513.1                                     570700 30 -    998990 taattaata-------------ttt------tac-atg-GT-GA-GCT----TCAGG
i Bos_mutus.JH883513.1                                  C 0 I 281
s Bos_taurus.CM000177.6                                 136294059 30 - 158972876 taattaata-------------ttt------tac-atg-GT-GA-GCT----TTAgg
i Bos_taurus.CM000177.6                                 C 0 I 268
s Bubalus_bubalis.KI419065.1                              1229814 30 -   1914593 aaattaata-------------ttt------tac-atg-GT-GA-GCT----TCAGG
i Bubalus_bubalis.KI419065.1                            C 0 I 280
s Cacajao_ayresi.k141_724503                               112885 29 -    171031 AAGTTTGCT-------------TCT------TAC-ACA-GT-GT-G-T----TCAGA
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 11913 29 +    125063 AAGTTTGCT-------------TCT------TAT-ACA-GT-GT-G-T----TCAGA
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                13958 29 -    216513 AAGTTTGCT-------------TCT------TAC-ACA-GT-GT-G-T----TCAGA
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        6498 29 -    134917 AAGTTTGCT-------------TCT------TAC-ACA-GT-GT-G-T----TCAGA
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3218418 30 -   8989139 aaattgaca-------------ttt------tat-ATG-GT-GA-GCT----TCAGG
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           396123 30 -  15254737 aaattgaca-------------ttt------tat-ATG-GT-GA-GCT----TCAGG
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2971856 30 +   6889770 aaattgaca-------------ttt------tat-ATG-GT-GA-Gct----tcagg
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11517395 30 +  39901454 aaaGTAGCT-------------TTT------ATT-ATG-GT-GT-GCT----TCAGG
i CanFam4.chr31                                         I 448 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   12420 30 +     87036 AAAGTAGCT-------------TTT------ATT-ATG-GT-GT-GCT----TCAGG
i Canis_lupus_VD.CanFam_VD_scaffold_16982               I 455 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11264060 30 -  35597290 AAAGTAGCT-------------TTT------ATT-ATG-GT-GT-GCT----TCAGG
i Canis_lupus_dingo.QKWQ01001993.1                      I 452 C 0
s Canis_lupus_familiaris.chr31                           11086592 30 +  39895921 aaaGTAGCT-------------TTT------ATT-ATG-GT-GT-GCT----TCAGG
i Canis_lupus_familiaris.chr31                          I 455 C 0
s Canis_lupus_orion.HG994411.1                           16453611 30 -  44759192 AAAGTAGCT-------------TTT------ATT-ATG-GT-GT-GCT----TCAGG
i Canis_lupus_orion.HG994411.1                          I 450 C 0
s Capra_aegagrus.CM003214.1                              21324070 30 + 157394656 atattaata-------------ttt------tac-atg-gt-GA-GCT----TCAGG
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135705297 30 - 157403528 atattaata-------------ttt------tac-atg-gT-GA-GCT----TCAGG
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_979108                   910 29 -      1248 AAAGTTGCT-------------TTT------TAT-AGG-AT-AT-A-T----TCCAA
i Capromys_pilorides.CapPil_scaffold_979108             C 0 I 18
s Carlito_syrichta.NW_007248099.1                          307935 29 +    345090 ATGGTATCT-------------TTT------TAC-AGG-GC-AT-G-T----TCATT
i Carlito_syrichta.NW_007248099.1                       C 0 I 5
s Carollia_perspicillata.CarPer_scaffold_4436               58368 30 +     67245 AAATTACCT-------------ATT------TAT-ATG-GC-GC-GCT----CCAGG
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   29599 29 +     33760 AATGTATCT-------------TGA------TAC-ATG-GT-GT-G-T----TCAGT
i Castor_canadensis.CasCan_scaffold_47037               C 0 I 8
s Catagonus_wagneri.CatWag_scaffold_1305                   157633 22 -    276539 AAATTACTA-------------TTT------TAC-ATG-GT-GA-------------
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 I 7
s Cavia_aperea.AVPZ01000278.1                            15785543 29 -  24422027 NNNNNNNNN-------------NNN------NNN-NNN-NN-NN-N-N----NNNNN
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15797477 29 -  24440124 AAAGTAGTT-------------TGT------TTT-AAC-AT-AT-G-T----TCCCA
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       175668 29 +    436027 AAAGTAGTT-------------TGT------TTT-AAC-AT-AT-G-T----TCCCA
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18889728 29 -  29618158 AAGTTTGCT-------------TCT------TAT-ACA-GT-GT-G-T----TCAGA
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 7272 29 -     26817 AAGTTTGCT-------------TCT------TAT-ACA-GT-GT-G-T----TCAGA
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                11512 29 +     25043 AAGTTTGCT-------------TCT------TAT-ACA-GT-GT-G-T----TCAGA
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         6968 29 +     21754 ATGGTAGCT-------------GTT------TAC-AGG-GC-AT-G-T----TCATT
i Cephalopachus_bancanus.k141_702587                    C 0 I 5
s Ceratotherium_simum.JH767818.1                          4362733 30 +   7569818 AAATTAGCT-------------TTT------TAC-ATG-GT-GT-GCT----TCAGG
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         2485 30 -      9338 AAATTAGCT-------------TTT------TAC-ATG-GT-GT-GCT----TCAGG
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6554168 29 +   6739814 AAGTTAGTT-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      25645 29 +     60454 AAGTTAGTT-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                           850 29 -     21101 AAGTTAGTT-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         58160 29 -    107033 AAGTTAGTT-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        1052 29 -     17608 AAGTTAGTT-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          28547 29 +     30494 AAGTTAGTT-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          57393 29 -     59240 AAGTTAGTT-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          1094 29 +     16677 AAGTTAGTT-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           23252 29 +     35983 AAGTTAGTT-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11989780 29 +  12117833 AAGTTAGTT-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46476538 29 +  46592721 AAGTTAGTT-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      40089 29 -     45581 AAGTTAGTC-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       1095 29 +     35577 AAGTTAGTT-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                         871 29 -     25661 AAGTTAGTT-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                         849 29 -     17744 AAGTTAGTT-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        20458 29 +     37128 AAGTTAGTT-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           1679 30 -      6963 AAATTAGCT-------------TTT------TAC-GTG-GT-GT-GGC----TCAGG
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      I 2 I 1
s Cheirogaleus_major.k141_1157592                           57922 29 -     68416 AATGTAGCT-------------TTT------CAC-ATG-GT-GT-G-T----TCAGG
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            6965 29 +     13308 AATGTAGCT-------------TTT------CAC-ATG-GT-GT-G-T----TCAGG
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             4528 29 -     18223 AAGTTTGCT-------------TCT------TAT-ACA-GT-GT-G-T----TCAGA
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             21551 29 +     25473 AAGTTTGCT-------------TCT------TAT-ACA-GT-GT-G-T----TCAGA
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           40586 29 +     57117 AAGTTTGCT-------------TCT------TAT-ACA-GT-GT-G-T----TCAGA
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          45265 29 +     54541 AAGTTTGCT-------------TCT------TAT-ACA-GT-GT-G-T----TCAGA
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15960687 29 +  43084221 AAAGTAGCT-------------CGG------TAC-AAG-CT-GT-G-T----TCCAA
i Chinchilla_lanigera.JH721867.1                        C 0 I 3
s Chiropotes_israelita.k141_1189915                         70087 29 +    196370 AAGTTTGCT-------------TCT------TAT-ACA-GT-GT-G-T----TCAGA
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          14267 29 +     40510 AAGTTTGCT-------------TCT------TAT-ACA-GT-GT-G-T----TCAGA
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15138011 29 -  15256731 AAGTTAGTT-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      33058 29 -     53260 AAGTTAGTT-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101143622 29 + 101219884 AAGTTAGTT-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                15342 30 -     21363 AAATTAGCT-------------TTT------TAC-GTG-GT-GT-GGC----TCAAG
i Choloepus_didactylus.ChoDid_scaffold_36182            I 2 C 0
s Choloepus_hoffmanni.KN194586.1                           760653 29 +    964067 AAATTAGCT-------------TTT------TAC-GTG-GT-GT-AGC----TCAA-
i Choloepus_hoffmanni.KN194586.1                        I 2 C 0
s Colobus_angolensis.KN985967.1                          10885388 29 +  10971483 AAGTTAGTT-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147663552 29 + 156195979 AAGTTAGTT-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            15537 29 +     23629 AAGTTAGTT-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60611483 30 +  78930452 aatgtaatt-------------ttc-----t-ac-atA-AT-GT-GCT----TCAGG
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         38474 28 -     40477 AAATTAACT-------------TTT------TAT-GTT-GT-GT-GTT----TTG--
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 277194 29 -    399297 GATATAGCC-------------TGC------CAC-TAT--A-GCTG-T----TTGGA
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53027880 28 +  72327488 GAAATTGCC--------------AG------CAC-TTT--A-GCAG-T----TTGGG
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             18529 29 -     19186 AAATTAACT-------------TT-------TAT-ATG-GC-TT-TCT----TCAGG
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 I 3
s Cryptoprocta_ferox.CryFer_flattened_line_19014            50239 30 -     70449 AAATTAGCT-------------TTC------TAC-ATG-GT-AT-ACT----TCAGA
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  207100 29 -    956709 AAGGTACCT-------------TGT------TAC-ACG-GT-AA-A-T----TCTGG
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 I 9
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 29672 29 -     67205 AAAGTTGCC-------------CAT------TAG-AGG-GT-AA-C-T----TCCAA
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                16696 29 +     26546 AAAGTAGTT-------------TGT------TAC-AAT-GT-AT-G-T----TCTGA
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             57788 28 -    236241 AAAGTAATG-------------TGT------TAC-AAT-GT-AT-G-T----TC-AG
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          182513 30 -   6883506 atattagct-------------TTT------TAC-ATG-GT-GT-GGC----TCAGC
i Dasypus_novemcinctus.JH568778.1                       I 2 I 1
s Daubentonia_madagascariensis.ctg11                     16843775 29 +  31942871 AAGGTAGCT-------------TTT------CAC-ATA-GT-GT-G-T----TCAGG
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80035685 30 -  96802777 aaactaata-------------ttt------taC-ATG-GT-GA-GCT----TCAGG
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18697677 30 -  18957592 AAACTACAT-------------TTT------TCT-ATG-GC-AT-Gct----ccagg
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 321380 30 +    993696 AAATTAGCT-------------TTT------TAC-ATG-GT-GT-GCT----TCAGG
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   2032 30 +    151128 AAATTAGCT-------------TTT------TAC-ATG-GT-GT-GCT----TCAGG
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dipodomys_ordii.KN672545.1                              3655084 28 +   4240102 ATGTCAGTT-------------TGC------TAC-ATA-GT-GT-G-T----TCAA-
i Dipodomys_ordii.KN672545.1                            C 0 I 8
s Dipodomys_stephensi.DipSte_scaffold_44365                 26718 27 +     28912 -TGTCAGTT-------------TGC------TAC-ATA-GT-GT-G-T----TCAA-
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                35034 29 -     73477 AAAGTAGTT-------------TGT------TAC-AAC-AT-AT-G-T----CCCCA
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22994123 31 -  44670279 ACATTTGCT-------------TTT------TCCTCcg-gt-ga-act----tccag
i Echinops_telfairi.JH980316.1                          I 2 C 0
s Eidolon_helvum.KE772537.1                                 11046 30 +     24177 aaattaact-------------ttt------tat-atc-aT-GT-GCt----tcagg
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1490343 30 +   1727528 aaattaata-------------ttt------tac-atg-gT-GA-GCT----TCAGG
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        238437 29 -    369425 GAAATTGCC-------------TGG------TAC-GAG--A-GCAG-T----GTGGG
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           5547 29 -      7838 GAAATTGCC-------------TGG------TAC-AAG--A-GCAG-T----GTGGG
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85870024 30 +  99434291 AAAGTATCT-------------TTC------TAG-ATG-GT-AT-GAT----TCAGG
i Enhydra_lutris.KZ291749.1                             C 0 I 4
s Eptesicus_fuscus.JH977687.1                             4703071 30 +   6522550 AAATTAACG-------------TTT------TAT-ATG-GT-GT-GCT----TCAGG
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5851798 30 -   7175178 CAATTAGCT-------------CTT------TAC-CTG-GC-AT-Gcc----tcagg
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13350301 30 +  41866177 CAATTAGCT-------------CTT------TAC-CTG-GC-AT-Gcc----tcagg
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          11791 30 +     92910 CAATTAGCT-------------CTT------TAC-CTG-GC-AT-Gcc----tcagg
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11531351 33 +  16010500 aaattgagt-------------tt-------CAT-ATT-GT-GT-GCTTGTTTCAGA
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48770192 29 -  48907691 AAGTTAGTT-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Erythrocebus_patas.Contig8                            C 0 I 4
s Eschrichtius_robustus.EscRob_flattened_line_685          313891 30 +    330699 AAACTAATA-------------TTT------TAC-ATG-GT-GA-GCT----TCAGG
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             60345 30 +     89355 AAACTAATA-------------TTT------TAC-ATG-GT-GA-GCT----TCAGG
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              3966 29 +     13586 AATGTAGCT-------------TTT------CAT-ATG-GT-GT-G-T----TCAGG
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               3903 29 -      6809 AATGTAGCT-------------TTT------CAT-ATG-GT-GT-G-T----TCAGG
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            10377 28 +     36558 AATGTAGC--------------TTT------CAT-ATG-GT-GT-G-T----TCAGG
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             6695 29 +     60246 AATGTAGCT-------------TTT------AAT-ATG-GT-GT-G-T----TCAGG
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                10174 29 +    109717 AATGTAGCT-------------TTT------CAT-ATG-GT-GT-G-T----TCAGG
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               14557 29 +     16540 AATGTAGCT-------------TTT------AAT-ATG-GT-GT-G-T----TCAGG
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                14830 29 +     27497 AATGTAGCT-------------TTT------CAT-ATG-GT-GT-G-T----TCAGG
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           17287 29 +     26808 AATGTGGCT-------------TTT------CAT-ATG-GT-GT-G-T----TCAGG
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                32022 29 +     46535 AATGTAGCT-------------TTT------CAT-ATG-GT-GT-G-T----TCAGG
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              14744 29 -     29447 AATGTAGCT-------------TTT------CAT-ATG-GT-GT-G-T----TCAGG
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129891200 30 - 159252932 AAATTAGCT-------------TTT------TAC-ATG-GT-AT-GCT----TCAGG
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129278272 30 - 158578461 AAATTAGCT-------------TTT------TAC-ATG-GT-AT-GCT----TCAGG
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 19407 30 +     52776 AAATTAGCT-------------TTT------TAC-ATG-GT-AT-GCT----TCAGG
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13891640 29 -  19261668 AAAGTAGCT-------------TGT------TAC-AAA-GT-GT-G-T----TCCAA
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     209874 29 -    847004 AAGGTGGCT-------------TTT------CAC-ATG-GC-GT-G-T----TTAGG
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           12253 29 -     43889 AAGGTGACT-------------TTT------CAC-ATG-GC-GT-G-T----TTAGG
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           9321 29 +     27357 AAGGTGGCT-------------TTT------CAC-ATG-GC-GT-G-T----TCAGG
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               155216  7 +    324696 ATTGTAG--------------------------------------------------
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    180143 30 -    189561 aaattaata-------------ttt------tac-atg-GT-GA-GCT----TCAGG
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           11805 29 -     18683 AAGGTGGCT-------------TCT------GAC-ATG-GT-AT-G-T----TCAGG
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               4259 29 -     14630 AAGTTAGCT-------------TCT------TAT-ACA-AT-AT-G-T----CCAGA
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119651358 29 - 195582420 AAGTTAGCT-------------TCT------TAT-ACA-AT-AT-G-T----CCAGA
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   76535 29 +    118900 AAAGTGGCT-------------TTT------GAC-ATG-GT-GT-G-T----TCAGC
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                          767 29 +     10286 AATGTAGCT-------------TTT------CAT-ATG-GT-GT-G-T----TCAGG
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_1254239                            8943 29 +      9690 AATGTAGCT-------------TTT------CAT-ATG-GT-GT-G-T----TCAGG
i Hapalemur_gilberti.k141_1254239                       C 0 C 0
s Hapalemur_griseus.k141_1387522                             4572 29 +     56096 AATGTAGCT-------------TTT------CAT-ATG-GT-GT-G-T----TCAGG
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        27822 29 -     42470 AATGTAGCT-------------TTT------CAT-ATG-GT-GT-G-T----TCAGG
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        44446 29 -     54384 AATGTAGCT-------------TTT------CAT-ATG-GT-GT-G-T----TCAGG
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              15447 30 +     53719 ATATTAGCT-------------TTC------TAC-ATG-GT-AT-ACT----TCAGG
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                26341 30 -     91191 ATATTAATA-------------TTT------TAC-ATG-GT-GA-GCT----TCAGG
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2550026 22 +  31725842 AAAGTAGCT-------------TGT------TAC-AAA-GT-AT-------------
i Heterocephalus_glaber.JH602058.1                      C 0 I 3
s Heterohyrax_brucei.HetBruBak_scaffold_25354               56435 43 +     73687 AGATTTCCTGTTAAGCCAAGTCGTT------TAC-ATG-GT-GT-ATA----TCAGG
i Heterohyrax_brucei.HetBruBak_scaffold_25354           I 2 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              145920 30 +    277961 AAACCAATA-------------TTT------TAC-ATG-GT-GA-GCT----TCCGG
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      277251 30 -    477199 aaattaact-------------ttt------tac-atg-gt-gt-gtt----tcagg
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              6410 30 -      9143 AAATTAACT-------------TTT------TCC-ATG-GT-GT-GTT----TCAGG
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg649                                   102683 29 +    115816 AAGTTAGCT-------------TCT------TAT-ACG-AT-AT-G-T----TCAGA
i Hoolock_leuconedys.ctg649                                I 153 I 82
s Hyaena_hyaena.HyaHya_flattened_line_20729                 14542 29 -     67322 AAATAAGCT-------------TTT------TAC-ATG-AT-AT-ACT----T-AGG
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           17914 28 -    119109 AAAGTA-TT-------------TGT------TAC-AAC-AT-GC-G-T----CCCCC
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              4086 29 +      5897 AAGTTAGCT-------------TCT------TAT-ACG-AT-AT-G-T----TCAGA
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_624065                                950 29 +      2112 AAGTTAGCT-------------TCT------TAT-ACG-AT-AT-G-T----TCAGA
i Hylobates_agilis.k141_624065                          C 0 C 0
s Hylobates_klossii.k141_466549                             10526 29 +     11537 AAGTTAGCT-------------TCT------TAT-ACG-AT-AT-G-T----TCAGA
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14623631 29 -  25970782 AAGTTAGCT-------------TCT------TAT-ACG-AT-AT-G-T----TCAGA
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                             887 29 -      2977 AAGTTAGCT-------------TCT------TAT-ACG-AT-AT-G-T----TCAGA
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     5088 29 +     22540 AAAGCAGCT-------------TGT------TAC-AAG-GT-AT-T-T----CCCAA
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7124805 28 +  13083262 AAGGAAACC-------------TGT------CAC-ATG-G--TT-G-T----TCAGG
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 I 7
s Indri_indri.k141_4418183                                    389 29 -      1457 AATGTAGCT-------------TTT------CAC-ATG-GT-GT-G-T----TCCAG
i Indri_indri.k141_4418183                              C 0 I 6
s Inia_geoffrensis.IniGeo_flattened_line_66725               7671 30 +     17520 AAACTAATA-------------TTT------TAC-ATA-GT-GA-GCT----TCAGG
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8564631 27 +  11848649 GAGATCACT-------------TC-------TGC-CTG-GT-GT-G-T----TTGA-
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               22505 30 +     37189 AAACTAATA-------------TTT------TAC-ATG-GT-GA-GCT----TCAGG
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          49108 29 -    147782 AAGTTAGCT-------------TCT------TAT-ACA-GT-GT-G-T----TCAGA
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   112918 30 -    115756 AAATTAACA-------------TTT------TAT-ATG-AT-GT-GCT----TCATG
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258406127 29 - 285822530 AATGTAGCT-------------TTT------CAT-ATG-GT-GT-G-T----TCAGG
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        22890 29 +     39228 AATGTAGCT-------------TTT------CAC-CTG-GT-GT-G-T----TCAGA
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            52265 29 +     63517 AATGTAGCT-------------TTT------CAC-CTG-GT-GT-G-T----TCAGA
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        77515 29 +    116806 AATGTAGCT-------------TTT------CAC-CTG-GT-GT-G-T----TCAGA
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     30529 29 -     33031 AATGTAGCT-------------TTT------CAC-CTG-GT-GT-G-T----TCAGA
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3084241 30 -   3498232 AAAGTAGCT-------------TTC------TAT-ATG-GC-GT-GCT----TCAGG
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    11895 29 +     22452 GAGTTATCT-------------TTT------AAC-ATG-GG-GT-A-T----TCAGG
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            134838 30 +   3060487 aaactaata-------------ttt------aaC-ATA-GT-GA-GCT----TCAGG
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19247257 29 +  19376315 AAGTTAGTT-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            9638 29 +     84689 AAGGTAGCT-------------TTT------CAC-ATG-GG-GT-G-T----CCAGG
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3777387 29 +   6799190 AAGGTAGCT-------------TTT------CAC-ATG-GG-GT-G-T----CCAGG
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20590975 30 -  62548349 AAATTAGCT-------------TTT------TAC-GTG-GT-GT-ACT----TCAGG
i Loxodonta_africana.GL010040.1                         I 2 C 0
s Lycaon_pictus.CM007556.1                               11086048 30 +  39895028 aaaGTAGCT-------------TTT------ATT-ATG-GT-GT-GCT----TCAGG
i Lycaon_pictus.CM007556.1                              I 455 C 0
s Macaca_arctoides.k141_2201161                             18997 29 +     74745 AAGTTAGTT-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12705453 29 +  12821369 AAGTTAGTT-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                1098 29 -      3136 AAGTTAGTT-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           45915 29 +     63263 AAGTTAGTT-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                  618 29 -      2568 AAGTTAGTT-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 1204 29 -      7381 AAGTTAGTT-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  44422 29 -     79256 AAGTTAGTT-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196034530 29 + 196197964 AAGTTAGTT-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11444697 29 +  11645122 AAGTTAGTT-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   3369 29 -     46448 AAGTTAGTT-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                1041 29 -     13212 AAGTTAGTT-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 14721 29 -     55006 AAGTTAGTT-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43839839 29 +  43892939 AAGTTAGTT-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               16008 29 -     24607 AAGTTAGTT-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               3374 29 -     27140 AAGTTAGTT-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                700460 30 +    802869 AAATTAACT-------------TTT------TAC-ATA-GT-GT-GCT----TCATG
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43436416 29 -  43563597 AAGTTAGTT-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4449242 29 -   4543643 AAGTTAGTT-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36872644 28 +  64221397 AAGGAAACC-------------TGT------TAC-ATG-G--TT-G-T----TCAGG
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       63258 30 -    234502 AAACTAACT-------------TTT------CAC-AGG-GC-AT-GTT----TCAAG
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_146202             834 30 -      1999 AAAGTATCT-------------TTC------TAG-ATG-GT-GT-GAT----TCAGG
i Mellivora_capensis.MelCap_flattened_line_146202       C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               11355 27 +     15977 GAA--AGCC-------------CAC------TAC-TAG--A-GCAG-T----TTGGG
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1045618 28 -  26018355 GAAACGACC--------------AA------CAC-TAT--A-GCAG-T----TTGGG
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Microcebus_murinus.CM007691.1                          16509132 29 +  47401472 AAGGTACCT-------------TTT------CAC-ATG-GC-AT-G-T----TCAGG
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  30552 30 -     48017 AAATTTGCT-------------TTT------TCC-CTG-GT-GA-ACT----TCAGA
i Microgale_talazaci.MicTal_scaffold_34660              I 2 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               21553 30 -     32043 AAATTACCT-------------TTT------CAT-ATG-GC-AC-GCT----CCAGG
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22818727 29 -  98408828 GACATTGCC-------------TGA------TAC-CAT--A-GCAG-T----GTGGG
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8208544 30 +  10048721 aaattaact-------------ttc------tAT-ATG-AT-GT-Gat----tgggg
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            33200 30 +     45743 AAATTAACT-------------TTC------TAA-ATG-AT-GT-GAT----TCGGG
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                          969 29 +     29742 AAGTTAGTT-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         9749 30 -    104932 AAATTGGCT-------------TTC------TAT-ATG-GT-GT-GCT----TCAGA
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     4522 29 +      8497 AAGGTAGTT-------------TTT------CAC-ATG-GC-GT-G-T----TCAGG
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 145273 30 +    154973 AAACTAATA-------------TTT------TAC-ATG-GT-GA-GCT----TCAGG
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                160061 30 +    265003 AAATTACCT-------------TTT------TAT-ATT-GT-GT-GCT----CCAGG
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 3445 29 -      4346 AAATTAAT--------------TTT------TAC-ATG-GT-GA-GCT----TCAGG
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  143138 30 -    168139 ATATTAGCT-------------TTC------TAC-ATG-GT-AT-ACT----TCAGG
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          18434 30 -    100666 AAATTAATG-------------TTT------TAT-ACA-AT-GT-GCT----TCAGG
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70765224 29 +  92629107 GAAATAGCT-------------CAC------TCC-TTC--T-GCgt-t----ttggg
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75488261 29 +  98207768 GAAATAGCT-------------CAC------TCC-TTC--T-GCgt-t----ttggg
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67554503 30 +  89017189 GAAATTGCC-------------CAC------TAC-TAC--AAACAT-t----ttggg
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74329440 29 +  97876770 GAAATAGCT-------------CAC------TCC-TTC--T-GCgt-t----ttggg
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             10516 29 +     98495 AAGGTGGCT-------------TCT------GAC-ATG-GT-GT-G-G----TCAGA
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4422406 30 -  28371801 AAAGTATCT-------------TTC------TAG-ATG-GT-AT-GAT----TCAGG
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     88975 29 -    117718 AACATGGCT-------------TGT------TAC-GGG-AT-AT-A-T----TCCAA
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               966736 30 +   8389877 AAATTAACG-------------TTT------TAT-ATG-GT-GT-GCT----TCAGG
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5018412 30 +   6462685 AAATTAACG-------------TTT------TAT-ATG-GT-GT-GCT----TCAGG
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3464316 30 -   3747815 AAACTAACG-------------TTT------TAT-ATG-GT-GT-GCT----TCAGG
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         9531 30 +     66751 AAATTAACG-------------TTT------TAT-ATG-GT-GT-GCT----TCAGG
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3915 17 -      8794 AAATTAGCA-------------TTT------TAC-AT--------------------
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        I 2 I 10
s Nannospalax_galili.KL201303.1                            117088 29 +    362372 AATATAGCT-------------TGC------TAC-ATG-GT-GC-A-T----TTGAG
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               7471 29 +     48152 AAGTTAGTT-------------TCT------TTT-ACA-AC-AT-G-T----TCAGA
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4483141 30 -  14209539 AAAGTAGCT-------------TTC------TAT-ATG-GT-GT-GCT----TCAGG
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3949886 30 -   4490290 aaactaata-------------ttt------tac-ATG-GT-GA-GCT----TCAGG
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  48166 30 +     94413 AAATTATCT-------------TTT------AAT-ATG-GC-AT-ACT----CCAAG
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 I 5
s Nomascus_annamensis.k141_1439838                           1828 29 +      3718 AAGTTAGCT-------------TCT------TAT-ACG-AT-AT-G-T----TCAGA
i Nomascus_annamensis.k141_1439838                      I 28 I 31
s Nomascus_concolor.k141_226614                               188 29 -      5092 AAGTTAGCT-------------TCT------TAT-ACG-AT-AC-G-T----TCAGA
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_642452                             971 29 +      2851 AAGTTAGCT-------------TCT------TAT-ACG-AT-AC-G-T----TCAGA
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_a.k141_595747                                  1609 29 +      4512 AAGTTAGCT-------------TCT------TAT-ACG-AT-AC-G-T----TCAGA
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                29080 30 +   3668941 AAAGTAGCT-------------TTT------ATT-ATG-GT-GT-GCT----TCAGG
i Nyctereutes_procyonoides.CAJHUB010000786.1            I 494 C 0
s Nycticebus_bengalensis.LG16                            65566072 29 -  95554990 AAGGTAGCT-------------TTT------CAC-ACG-GG-GT-G-T----CCAGG
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            2801 29 +      6470 AAGGTAGCT-------------TTT------CAC-ACG-GG-GT-G-T----CCAGG
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65668410 29 +  89412551 AAGGTAGCT-------------TTT------CAC-ATG-GG-GT-G-T----CTAGG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4994968 29 -  23139505 AAGTTAGTG-------------TTT------CAC-ATG-GG-GT-G-T----AGAGG
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3684513 29 +  10294119 AAAGTTGCT-------------CGT------TAC-AGG-GT-AT-A-T----TCCAA
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             677786 30 -   3126709 AAAGTAGCT-------------TTC------TAT-ATG-GT-GT-GCT----TCAGG
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1078573 30 +   1425656 aaattaata-------------ttt------tac-atg-gT-GA-GCT----TCAGG
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         35869 30 +     78940 aaattaata-------------ttt------tac-atg-GT-GA-GCT----TCAGG
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  123985 23 +    145789 GAAATTGCC-------------TGA------TAA-GAT--A-GCGG-----------
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 I 4
s Onychomys_torridus.OnyTor_scaffold_12578                  35755 29 +     62360 GAAATAGCC-------------TGG------CAG-TAT--A-GCAC-T----TTGGG
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7223570 30 -   7562323 aaactaata-------------ttt------tac-ATG-GT-GA-GCT----TCAGG
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              43293 30 -     66828 AAATTCACC-------------TTT------TAC-ATG-GT-AC-ACT----TCAGG
i Orycteropus_afer.OryAfe_flattened_line_13509          I 2 C 0
s Oryctolagus_cuniculus.CM000803.1                      141874919 29 + 163896628 CAGTTATCT-------------TTT------GAC-ATG-GG-GT-A-T----TCAGG
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      306365 30 -    505867 AAAGTAGCT-------------TTT------ATT-ATG-GT-GT-GCT----TCAGG
i Otocyon_megalotis.JAEUCK010005121.1                   I 445 C 0
s Otolemur_crassicaudatus.k141_321880                       37970 29 +     38679 AAGGTGGCT-------------TTT------CAC-ATG-GC-AT-G-T----TTAGG
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18007398 29 -  38779656 AAGGTGGCT-------------TTT------CAC-ATG-GC-GT-G-T----TTAGG
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134076135 30 - 275406953 atattaata-------------ttt------tac-atg-gT-GA-GCT----TCAGG
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      77349 30 +    140051 ATATTAATA-------------TTT------TAC-ATG-GT-GA-GCT----TCAGG
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127573619 29 - 205426864 AAGTTAGCT-------------TCT------TAT-ACA-AT-AT-G-T----TCAGA
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.NBAG03003562.1                            12081 29 +     18198 AAGTTAGCG-------------TCT------TAT-ATG-GT-AC-G-T----TCAGA
i Pan_troglodytes.NBAG03003562.1                        C 0 I 122
s Panthera_onca.PanOnc_flattened_line_1615                  32602 29 +    295523 A-ACTAGCT-------------TTT------TAC-ATG-GT-AT-GCT----TCAGG
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3636336 29 +  18214204 A-ACTAGCT-------------TTT------TAC-ATG-GT-AT-GCT----TCAGG
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5025983 29 -   6340057 A-ACTAGCT-------------TTT------TAC-ATG-GT-AT-GCT----TCAGG
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1064996 30 -   1292953 atattaata-------------ttt------tac-atg-gt-GA-GCT----TCAGG
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188155207 29 - 188283584 AAGTTAGTT-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             3524 29 +      5367 AAGTTAGTT-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47512595 29 +  47705337 AAGTTAGTT-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 66573 29 -    104429 AAGTTAGTT-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    5105 29 +     14967 AAGTTAGTT-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                  966 29 -      7628 AAGTTAGTT-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113918 30 -    135482 AAATTATCT-------------TTT------TAC-ATG-GT-AC-GTT----TCAGG
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           4387 29 -     23713 AAGGTGGCT-------------TTT------CAC-ATG-GG-GT-G-T----TCAGG
i Perodicticus_ibeanus.k141_117958                      C 0 I 6
s Perodicticus_potto.k141_713187                            23693 29 -     27972 AAGGTGGCT-------------TTT------CAC-ATG-GG-GT-G-T----TCAGG
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      42548 29 -     45160 AAGTCAGTT-------------TGC------TAC-ATG-GT-CT-G-T----TCAAT
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 I 8
s Peromyscus_maniculatus.KI615518.1                       4948943 29 -   8017169 GAAATAGCC-------------TGG------CAG-TAT--A-GCAC-T----TTGGG
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    11448 29 -     36578 gaaatAGCT-------------TCT------TAT-AAG-GT-AT-A-T----TCCAA
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            120187 30 -    122454 AAACTAATA-------------TTT------TAC-ATG-GT-GA-GCT----TCAGG
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1987485                            993 29 -      5908 AAGTTAGTT-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       1613 29 -     17985 AAGTTAGTT-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                             980 29 +      7694 AAGTTAGTT-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26739458 29 +  26888534 AAGTTAGTT-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            96148 14 +    112873 AAATTAACA-------------ATT------TA------------------------
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             42590 29 -     61926 AAGTTTGCT-------------TCT------TAT-ACA-GT-GT-G-T----TCAGA
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        24021 29 +     78826 AAGTTTGCT-------------TCT------TAT-ACA-GT-GT-G-T----TCAGA
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              7970 29 -     15800 AAGTTTGCT-------------TCT------TAT-ACA-GT-GT-G-T----TCAGA
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        11168 29 -     16101 AAGTTTGCT-------------TCT------TAT-ACA-GT-GT-G-T----TCAGA
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          4477 29 +      9673 AAGTTTGCT-------------TCT------TAT-ACA-GT-GT-G-T----TCAGA
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13473473 29 -  19735023 AAGTTTGCT-------------TCT------TAT-ACA-GT-GT-G-T----TCAGA
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           12379 29 -     31692 AAGTTTGCT-------------TCT------TAT-ACA-GT-GT-G-T----TCAGA
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           4255 30 +     21690 AAACTAATA-------------TTT------TAC-ATG-GA-GC-GCT----TGAGG
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       21814 29 +     44506 AAGTTTGCT-------------TCT------TAT-ACA-GT-GT-G-T----TCAGA
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        22026 29 +     67491 AAGTTTGCT-------------TCT------TAT-ACA-GT-GT-G-T----TCAGA
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      12265 29 -     98129 AAGTTTGCT-------------TCT------TAT-ACA-GT-GT-G-T----TCAGA
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     21865 29 +    147771 AAGTTTGCT-------------TCT------TAT-ACA-GT-GT-G-T----TCAGA
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        22120 29 -     23762 AAGTTTGCT-------------TCT------TAT-ACA-GT-GT-G-T----TCAGA
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          2586 29 -     55515 AAGTTTGCT-------------TCT------TAT-ACA-GT-GT-G-T----TCAGA
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         21939 29 +    152463 AAGTTTGCT-------------TCT------TAT-ACA-GT-GT-G-T----TCAGA
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      8699 29 +      8943 AAGTTTGCT-------------TCT------TAT-ACA-GT-GT-G-T----TCAGA
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                         11661 29 +    134592 AAGTTTGCT-------------TCT------TAC-ACA-GT-GT-G-T----TCAGA
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          22249 29 -     75465 AAGTTTGCT-------------TCT------TAT-ACA-GT-GT-G-T----TCAGA
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              186144 29 -    373494 AAGTTAGCT-------------TCT------TAT-ACG-AT-AT-G-T----TCAGA
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19806792 29 +  19899266 AAGTTAGCT-------------TCT------TAT-ACG-AT-AT-G-T----TCAGA
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               4715 29 -     15069 AAGTTAGTT-------------TCT------TAC-ACA-GC-AT-G-T----TCAGA
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              4849 29 +     14865 AAGTTAGTT-------------TCT------TAC-ACA-AC-AT-G-T----TCAGA
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                76299 43 +     78963 AGATTTCCTGTTTAGCCAAGTCGTT------TAC-ATG-GT-GT-ATA----TCAGG
i Procavia_capensis.ProCapCap_scaffold_15315            I 2 C 0
s Prolemur_simus.MPIZ01000048.1                           6847508 29 +  12164890 AATGTAGCT-------------TTT------CAT-ATG-GT-GT-G-T----TCAGG
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    666730 29 -   2312742 AATGTAGCT-------------TTT------CAC-ATG-GT-GT-G-T----TCCGG
i Propithecus_coquerelli.NW_012147997.1                 C 0 I 6
s Propithecus_coronatus.k141_1353159                         2557 29 +     11805 AATGTAGCT-------------TTT------CAC-ATG-GT-GT-G-T----TCCGG
i Propithecus_coronatus.k141_1353159                    C 0 I 6
s Propithecus_diadema.k141_577245                           41893 29 +     52369 AATATAGCT-------------TTT------CAC-ATG-GT-GT-G-T----TCCGG
i Propithecus_diadema.k141_577245                       C 0 I 6
s Propithecus_edwardsi.k141_1317105                         34283 29 -     44753 AATATAGCT-------------TTT------CAC-ATG-GT-GT-G-T----TCCGG
i Propithecus_edwardsi.k141_1317105                     C 0 I 6
s Propithecus_perrieri.k141_7554                            16203 29 +     27322 AATATAGCT-------------TTT------CAC-ATG-GT-GT-G-T----TCCGG
i Propithecus_perrieri.k141_7554                        C 0 I 6
s Propithecus_tattersalli.k141_907138                       15839 29 -     53241 AATGTAGCT-------------TTT------CAC-ATG-GT-GT-G-T----TCCGG
i Propithecus_tattersalli.k141_907138                   C 0 I 6
s Propithecus_verreauxi.k141_158021                         38111 29 -     48185 AATGTAGCT-------------TTT------CAC-ATG-GT-GT-G-T----TCCGG
i Propithecus_verreauxi.k141_158021                     C 0 I 6
s Psammomys_obesus.NESX01026517.1                           32893 27 +     77221 GAA--AGCC-------------CAC------TAC-TAG--A-GCAG-T----TTGGG
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            2727 30 -     27784 aaatggtat-------------ttt------tat-atg-GT-GT-Gct----ccagg
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        244500 30 -    344369 AAAGTATCT-------------TTC------TAG-ATG-GT-AT-GAT----TCAGG
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13244847 30 -  17261082 aaattaact-------------ttt------tat-atc-GA-GT-Gct----tcagg
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             602797 30 -   3946241 aaattaact-------------ttt------tat-atc-GA-GT-GCT----TCAGG
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131532565 30 - 161321710 AAATTAGCT-------------TTT------TAC-ATG-GT-AT-GCT----TCAGC
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             28833 29 +     56732 AAGTTAGTT-------------TCT------TAC-ACA-AC-AT-G-T----TCAGA
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6805324 29 +   6970761 AAGTTAGTT-------------TCT------TAC-ACA-AC-AT-G-T----TCAGA
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             4718 29 +     18040 AAGTTAGTT-------------TCT------TAC-ACA-AC-AT-G-T----TCAGA
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                14650 30 +     68503 AAATTAATA-------------TTT------TAC-ATG-GT-GA-GCT----TCAGG
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13914266 29 +  90463843 GAAGTAGTT-------------TGC------TAG-TAC--G-GCAG-T----TTGGG
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1786657 30 +   2252614 aaGTTAACT-------------TTT------TAC-ATG-GT-GT-Gtt----tcagg
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_1391695                            946 29 -      1866 AAGTTAGTT-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Rhinopithecus_bieti.k119_1391695                      C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206376603 29 - 206558726 AAGTTAGTT-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44855503 29 -  45163003 AAGTTAGTT-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                18137 30 +    109198 AAATTAACT-------------TTT------TAT-ATC-GT-GT-GCT----TCAGG
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       6452 30 +     12214 AAATTAATA-------------TTG------TAC-ATG-GT-AA-GCT----TCAGG
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15671678 28 -  43202129 AAGTTTGCT-------------T-T------TAT-ACA-GT-GT-G-T----TCAGA
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        3595 28 +     34089 AAGTTTGCT-------------T-T------TAT-ACA-GT-GT-G-T----TCAGA
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              3536 28 -     60842 AAGTTTGCT-------------T-T------TAT-ACA-GT-GT-G-T----TCAGA
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              3631 28 +     67014 AAGTTTGCT-------------T-T------TAT-ACA-GT-GT-G-T----TCAGA
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              3609 28 +     60816 AAGTTTGCT-------------T-T------TAT-ACA-GT-GT-G-T----TCAGA
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 3546 28 -     76454 AAGTTTGCT-------------T-T------TAT-ACA-GT-GT-G-T----TCAGA
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17340271 29 -  30362882 AAGTTTGCT-------------TCT------TAT-ACA-GT-GT-G-T----TCAGA
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         19630 29 -     62485 AAGTTTGCT-------------TCT------TAT-ACA-GT-GT-G-T----TCAGA
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   30226 30 -    114521 AAAGTAACT-------------TTCT------AC-ATA-AT-GT-GCT----TCAGT
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        2330 29 +     15331 AAGTTAGTG-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       7727 29 +     20762 AAGTTAGTG-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         117725 29 +    130994 AAGTTAGTG-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           36516 29 +     46263 AAGTTAGTG-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     29630 29 +     42640 AAGTTAGTG-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        12674 29 +     30600 AAGTTAGTG-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   98526 29 -    120886 GAAATACCC-------------TGG------CAT-GAT--A-GCAG-T----TTGGG
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            16846 30 +    739146 AAATTAAAT-------------TTT------TGC-TAA-GT-AT-GCT----TTAGG
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17749487 18 -  27805282 aaataaact-------------tt-------tat-agg-A-----------------
i Sorex_araneus.JH798170.1                              C 0 I 3
s Spermophilus_dauricus.KZ294190.1                        2238725 28 +   2842873 AAGGAAACC-------------TGT------TAC-ATG-G--TT-G-T----TCAGG
i Spermophilus_dauricus.KZ294190.1                      C 0 I 7
s Spilogale_gracilis.SpiGra_flattened_line_905             233251 30 -    276980 AAAGTAGCT-------------TTC------TAT-ACG-GC-AT-GAT----TCAGG
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            25804 30 +     62062 ATATTAGCT-------------TTC------TAC-ATG-GT-AT-ACT----TCAGG
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189270746  6 + 218635234 -----------------------------------------------T----TCAGG
i Sus_scrofa.CM000824.4                                 I 16 C 0
s Symphalangus_syndactylus.tarseq_24                        13888 29 -  13920577 AAGTTAGCT-------------TCT------TAT-ACG-AT-AT-G-C----TCAGA
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               4895 28 -      6213 AAATGAGCT-------------TTT------TAT-ATA-GT-AT-GCT----TCA--
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               13590 17 +     45698 AAATTAGCT-------------TTT------TAC-AT--------------------
i Tamandua_tetradactyla.TamTet_scaffold_26877           I 2 I 10
s Tapirus_indicus.TapInd_scaffold_176                      805585 30 +   1148477 AAATTAGCT-------------CTT------TAC-CTG-GC-AT-GCT----TCAGG
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  56245 30 +     99546 AAATTAGCT-------------CTT------TAC-CTG-GC-AT-GCT----TCAGG
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 I 10
s Tarsius_lariang.k141_609102                               25419 29 +     42269 ATGGTAGCT-------------TTT------TAC-GGG-GC-AT-G-T----TCATT
i Tarsius_lariang.k141_609102                           C 0 I 5
s Tarsius_wallacei.k141_48636                               58735 29 +     65473 ATGGTAGCT-------------TTT------TAT-GGG-GC-AT-G-T----TCATT
i Tarsius_wallacei.k141_48636                           C 0 I 5
s Theropithecus_gelada.CM009951.1                       194006734 29 - 194193292 AAGTTAGTT-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             38243 29 -     47444 GAAGTAAGT-------------TGT------TAT-CAG-GT-AT-G-T----TCTGA
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  4447 30 +      6782 AAATTAGCT-------------TTT------TAC-ATG-GT-AT-GGC----TCAGG
i Tolypeutes_matacus.TolMat_scaffold_269431             I 2 I 1
s Tonatia_saurophila.TonSau_scaffold_3334                  134737 30 -    259118 AAATGAACT-------------TTT------TAT-ATG-GC-AT-GCT----CCAGG
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        25837 29 +     38948 AAGTTAGTG-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   19564 29 -     32910 AAGTTAGTG-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                       951 29 -     12939 AAGTTAGTG-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                        886 29 -     14244 AAGTTAGTG-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           42284 29 -     54611 AAGTTAGTG-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_878600                        1114 29 +      1165 AAGTTAGTG-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Trachypithecus_germaini.k141_878600                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     2262 29 -     15592 AAGTTAGTG-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                           919 29 +     14371 AAGTTAGTG-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  50671 29 +     51589 AAGTTAGTG-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       13852 29 +     14732 AAGTTAGTG-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       4324 29 -     28054 AAGTTAGTG-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44659124 29 -  44834318 AAGTTAGTG-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       1427 29 +     13828 AAGTTAGTG-------------TCT------TAT-ACA-AC-AT-G-T----TCAGA
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   4034 30 +     90398 AAATTACTA-------------TTT------TAC-ATG-GT-GA-GCT----TCAGA
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16081437 30 +  31416278 AAATTAGCT-------------TTT------TAC-ATG-GT-Gg-act----tcaag
i Trichechus_manatus.JH594618.1                         I 2 C 0
s Tupaia_chinensis.KB320831.1                             2791736 29 -   3938065 AAGGTAGCT-------------TTT------CAC-ATG-AT-AT-A-T----TCAGG
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    4004 29 +     13056 AAGGTAGCT-------------TTT------CAC-GTG-AT-AT-A-T----TCAGG
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69312287 30 -  96451834 aaactaata-------------ttt------tac-ATG-GT-GA-GCT----TCAGG
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_139357                   747 36 +      2103 AAAGTAATT-------------TTCTATATATAC-ATA-AT-GT-GCT----TCAGG
i Uropsilus_gracilis.UroGra_scaffold_139357             C 0 C 0
s Ursus_maritimus.KK498671.1                              6513047 30 +  28682327 GAAGTAGCT-------------TTC------TAT-ATG-GT-GT-GAT----TCAGG
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  4212 29 -     20643 AATGTAGCT-------------TTT------CAC-ATG-GT-AT-G-T----TCAGG
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             23753 29 -     33872 AATGTAGCT-------------TTT------CAC-ATG-GT-AT-G-T----TCAGG
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1523525 30 -   2331223 AAATTGACA-------------TTT------TAC-ATG-GT-GA-GCT----TCAGG
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                136449 30 -    281493 AAAGTAGCT-------------TTT------ATT-ATG-GT-GT-GCT----TCAGG
i Vulpes_lagopus.VulLag_flattened_line_2045             I 456 C 0
s Xerus_inauris.XerIna_scaffold_7898                       125828 28 -    134049 AAGGAAATT-------------TGT------TAC-ATG-G--GT-G-T----TCAGA
i Xerus_inauris.XerIna_scaffold_7898                    C 0 I 7
s Zalophus_californianus.ZalCal_flattened_line_4097        212521 30 -    227762 AAAGTAGCT-------------TTC------TAT-ATG-GT-TT-GCT----TCAGG
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           5784 30 -      8775 AAACTAATA-------------TTT------TAC-ATG-GT-GA-GCT----TCAGG
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Dinomys_branickii.DinBra_scaffold_1996                   156356 54 +    228994 I
e Manis_pentadactyla.KN017078.1                             35015 87 +     58827 I
e Manis_javanica.JSZB01003966.1                            144940 87 +    252755 I
e Elephantulus_edwardii.JH947210.1                        7804622 10712 +  15467074 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     14107 296 -     20485 I
e Hylobates_pileatus_a.tarseq_592                             33311  5 -     60944 I
e Nomascus_siki_b.tarseq_80                             24175  0 -  18771707 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               10903 21 +    209709 AA-------G----------AA---------G--A-GGTGT------GTTGCACAC
s Acinonyx_jubatus.LLWD01000356.1                         2032254 24 +   3721120 AAGGA----A----------AGCA----T--G--C-T---A------TCTGGAGAC
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    111256 21 -    189883 AT-------GAAG-------AG---------G--CAC---A-------CTGGCCAT
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10655601 22 +  23371972 aa---ga-ga----------ag------cagg--c-t---a------TTTGG--AC
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7092526 24 -  16596857 AAGA----GA----------AGCA----T--G--C-T---C------TTTGGAGAC
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   11927 19 -     22067 ---------GAA-A------AG---------G--CAC---A-------CTGGAGAT
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                    262 21 -     60446 AA-------G----------AG---------G--A-GGTGT------GTTGCAGAC
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                          981 21 -     29318 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_21674                           1198 21 -      1421 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Allochrocebus_preussi.k141_21674                      C 0 C 0
s Allochrocebus_solatus.k141_371672                           875 21 -     80423 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             9168 21 -     18050 AG-------G----------AA---------G--A-AACGT------GTTGCAGAG
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                 10258 21 -     11521 AG-------G----------AA---------G--A-AACGT------GTTGCAGAG
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              9845 21 -     21359 AG-------G----------AA---------G--A-AACGT------GTTGCAGAG
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_298055                                 1141 21 +      1823 AG-------G----------AA---------G--A-AATGT------GTTGCAGAG
i Alouatta_juara.k141_298055                            C 0 C 0
s Alouatta_macconnelli.k141_1331706                          9141 21 -     10438 AG-------G----------AA---------G--A-AACGT------GTTGCAGAG
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            5797 21 +      7047 AG-------G----------AA---------G--A-AACGT------GTTGCAGAG
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             9077 21 +     10410 AG-------G----------AA---------G--A-AACGT------GTTGCAGAG
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            2887 21 -      4927 AG-------G----------AA---------G--A-AATGT------GTTGCAGAG
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             5816 21 +      6429 AG-------G----------AA---------G--A-AATGT------GTTGCAGAG
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3519024 27 +   4113121 AAGAATA-GG----------AA------TATA--C-T---A------TTTGGAGAG
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      389200 24 -    631301 AAGAA----G----------AG-A--A---CG--C-C---A------TACAGGGAC
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            29605 27 +     33004 AATAATA-GG----------AA------TATA--C-T---A------TTTGGAGAG
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 61525 23 +     78111 AG-------G----------AT---------TTCA-AGTGT------GTTGCAGAG
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            4466 23 +     22701 AG-------G----------AT---------TCCA-AGTGT------GTTGCAGAG
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5748423 23 +   9889416 AG-------G----------AT---------TCCA-AGTGT------GTTGCAGAG
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             5008 23 -    104377 AG-------G----------AT---------TCCA-AGTGT------GTTGCAGAG
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               5014 23 +     23246 AG-------G----------AT---------TCCA-AGTGT------GTGGCAGAG
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     2689 11 +      5067 ------------------------------------A---C-----C-CTGGAGAT
i Aplodontia_rufa.AprRuf_scaffold_156013                I 8 C 0
s Arctocebus_calabarensis.k141_1161114                      17198 21 +     17483 TA-------G----------AA---------A--A-GTAGC------TTGGGCAAC
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 7600 27 -     29036 AAGAAGA-GG----------GG-A--AA---G--C-T---G------TGCAGAGAC
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9538273 21 +  39197703 AG-------G----------AA---------G--A-AGTGT------GTTGCAGAG
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             59544 21 +     85812 AG-------G----------AA---------G--A-AGTGT------GTTGCAGAG
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                10556 21 +     89302 AG-------G----------AA---------G--A-AGTGT------GTTGCAGAG
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             15061 21 -     58268 AG-------G----------AA---------G--A-AGTGT------GTTGCAGAG
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             63052 21 +    119057 AG-------G----------AA---------G--A-AGTGT------GTTGCAGAG
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               5021 21 -     25888 AG-------G----------AA---------G--A-AGTGT------GTTGCAGAG
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 5663 12 -     16375 --------------------------------------AGT------ATCGGCAAC
i Avahi_laniger.k141_2840928                            I 6 C 0
s Avahi_peyrierasi.k141_2689020                              1983 12 +      2719 --------------------------------------AGT------ATCGGCAAC
i Avahi_peyrierasi.k141_2689020                         I 6 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26379036 27 +  51448160 AA-------GAAGAGG----AA------TATA--C-T---A------TTTGGAGAT
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        4268 27 -     13118 AA-------GAAGAGG----AA------TATA--C-T---A------TTTGGAGAT
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   42086 27 -     72089 AAGAATA-GG----------AA------TATA--C-T---A------TTTGGAGAG
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6558398 27 +   6870073 aAGAATA-GG----------AA------TATA--C-T---A------TTTGGAGAG
i Bison_bison.KN264915.1                                I 281 C 0
s Bos_indicus.CM003021.1                                138138624 27 - 161108492 aNGAATA-GG----------AA------TATA--C-T---A------TTTGGAGAG
i Bos_indicus.CM003021.1                                I 268 C 0
s Bos_mutus.JH883513.1                                     571011 27 -    998990 aAGAATA-GG----------AA------TATA--C-T---A------TTTGGAGAG
i Bos_mutus.JH883513.1                                  I 281 C 0
s Bos_taurus.CM000177.6                                 136294357 27 - 158972876 aGGAATA-GG----------AA------TATA--C-T---A------TTTGGAGAG
i Bos_taurus.CM000177.6                                 I 268 C 0
s Bubalus_bubalis.KI419065.1                              1230124 27 -   1914593 aaGAATA-GG----------AA------TATA--T-T---A------TTTGGAGAG
i Bubalus_bubalis.KI419065.1                            I 280 C 0
s Cacajao_ayresi.k141_724503                               112914 21 -    171031 AG-------G----------AA---------G--A-AGTGT------GTTGCAGAG
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 11942 21 +    125063 AG-------G----------AA---------G--A-AGTGT------GTTGCAGAG
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                13987 21 -    216513 AG-------G----------AA---------G--A-AGTGT------GTTGCAGAG
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        6527 21 -    134917 AG-------G----------AA---------G--A-AGTGT------GTTGCAGAG
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3218448 27 -   8989139 AA-------GAAGAGG----AA------TATA--C-T---G------TTTGGAGAC
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           396153 27 -  15254737 AA-------GAAGAGG----AA------TATA--C-T---G------TTTGGAGAC
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2971886 27 +   6889770 aa-------g----aagaggaatA----T--A--C-T---G------TTTGGAGAC
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11517425 24 +  39901454 AAGA----GA----------AGCA----T--G--C-T---A------TTTGCAGAC
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   12450 24 +     87036 AAGA----GA----------AGCA----T--G--C-T---A------TTTGCAGAC
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11264090 24 -  35597290 AAGA----GA----------AGCA----T--G--C-T---A------TTTGCAGAC
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11086622 24 +  39895921 AAGA----GA----------AGCA----T--G--C-T---A------TTTGCAGAC
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16453641 24 -  44759192 AAGA----GA----------AGCA----T--G--C-T---A------TTTGCAGAC
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21324100 27 + 157394656 AAGAATA-CG----------AA-TG---T--A--C-T---A------TTTGGAGAG
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135705327 27 - 157403528 AAGAATA-CG----------AA-TG---T--A--C-T---A------TTTGGAGAG
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_933029                  1020 18 +      1311 AA-------TAAG-------AA---------G--A-G---C-------TTAGTG--
i Capromys_pilorides.CapPil_scaffold_933029             I 41 I 9
s Carlito_syrichta.NW_007248099.1                          307969 11 +    345090 ---------------------------------------AT------GTTGGAAAC
i Carlito_syrichta.NW_007248099.1                       I 5 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               58398 27 +     67245 AAGAAGA-AG----------AG-A--A-T--G--C-T---A------TTCAGAGAC
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   29636 10 +     33760 ------------------------------------C---A-------TTGGAAAC
i Castor_canadensis.CasCan_scaffold_47037               I 8 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   157662 27 -    276539 AA-------G----------AAGAGGAATATA--C-T---A------TTTTGAAAT
i Catagonus_wagneri.CatWag_scaffold_1305                I 7 C 0
s Cavia_aperea.AVPZ01000278.1                            15785572 20 -  24422027 NN-------N-------NNNNN---------N--N-N---N-------NNNNNNNN
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15797506 20 -  24440124 AA-------AATG-------TG---------G--A-G---C-------TCAGTGAT
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       175697 20 +    436027 AA-------AATG-------TG---------G--A-G---C-------TCAGTGAT
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18889757 21 -  29618158 AG-------G----------AA---------G--A-AGTGT------GTTGCAGAG
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 7301 21 -     26817 AG-------G----------AA---------G--A-AGTGT------GTTGCAGAG
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                11541 21 +     25043 AG-------G----------AA---------G--A-AGTGT------GTTGCAGAG
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         7002 11 +     21754 ---------------------------------------AT------GTTGGAAAC
i Cephalopachus_bancanus.k141_702587                    I 5 C 0
s Ceratotherium_simum.JH767818.1                          4362763 27 +   7569818 AA-------GAAGAGG----AG------TATG--C-T---A------TTTGGAGAC
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         2515 27 -      9338 AA-------GAAGAGG----AG------TATG--C-T---A------TTTGGAGAC
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6554197 21 +   6739814 AA-------G----------AA---------G--A-GGTAT------GTTGCAGAC
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      25674 21 +     60454 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                           879 21 -     21101 AA-------G----------AA---------G--A-GGTAT------GTTGCAGAC
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         58189 21 -    107033 AA-------G----------AA---------G--A-GGTAT------GTTGCAGAC
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        1081 21 -     17608 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          28576 21 +     30494 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          57422 21 -     59240 AA-------G----------AA---------G--A-AGTGT------GTTGCAGAC
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          1123 21 +     16677 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           23281 21 +     35983 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11989809 21 +  12117833 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46476567 21 +  46592721 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      40118 21 -     45581 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       1124 21 +     35577 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                         900 21 -     25661 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                         878 21 -     17744 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        20487 21 +     37128 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           1710 28 -      6963 AA-------G--GAG-AA-AAGCA--A----G--TTT---T------TTTGGAAGC
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      I 1 C 0
s Cheirogaleus_major.k141_1157592                           57951 21 -     68416 AA-------G----------AA---------G--A-TAAGT------TTTGGCAAC
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            6994 21 +     13308 AA-------G----------AA---------G--A-GAAGT------TTTGGCAAC
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             4557 21 -     18223 AG-------G----------AA---------G--A-AGTGT------ATTGCAGAG
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             21580 21 +     25473 AG-------G----------AA---------G--A-AGTGT------ATTGCAGAG
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           40615 21 +     57117 AG-------G----------AA---------G--A-AGTGT------ATTGCAGAG
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          45294 21 +     54541 AG-------G----------AA---------G--A-AGTGT------ATTGCAGAG
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15960719 14 +  43084221 --------------------AG---------G--A-g---t-------ttagaaat
i Chinchilla_lanigera.JH721867.1                        I 3 C 0
s Chiropotes_israelita.k141_1189915                         70116 21 +    196370 AG-------G----------AA---------G--A-AGTGT------GTTGCAGAG
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          14296 21 +     40510 AG-------G----------AA---------G--A-AGTGT------GTTGCAGAG
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15138040 21 -  15256731 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      33087 21 -     53260 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101143651 21 + 101219884 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                15372 33 -     21363 AA-------G--GAG-A-GGAACA----T--G--T-T---ATTTGTTATTTGTTAT
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           760682 31 +    964067 ---------G--GAG-A-GGAA------Catg--t-t---atttgttatttgttat
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10885417 21 +  10971483 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147663581 21 + 156195979 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            15566 21 +     23629 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60611513 21 +  78930452 AG-------A----------AGCAG------G--C-C---A------GTTGGAGAG
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         38502 26 -     40477 -AGAAGA-GG----------AG-A--A-T--G--T-C---A------TCTGGAAAC
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 277223 21 -    399297 AT-------GAAG-------GG---------G--CAC---A-------CTGGCAAT
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53027908 21 +  72327488 AT-------GAAG-------TG---------G--CAC---A-------CCGGGCAT
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             18561 12 -     19186 ----------------------------------T-T---A------TTTGGAAAC
i Crocidura_indochinensis.CroInd_scaffold_38409         I 3 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  207138  8 -    956709 ------------------------------------------------TTAGAGAT
i Ctenodactylus_gundi.CteGun_scaffold_447               I 9 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            50269 12 -     70449 AAGA----GA----------AGCA----T--G------------------------
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 I 12
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 29701 20 -     67205 AA-------TAA-------TAG---------G--A-G---C-------TTAGTGAT
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                16725 19 +     26546 A--------AAAG-------AG---------G--A-G---C-------TTAGTGAT
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             57816 20 -    236241 AA-------AAAG-------AG---------A--A-G---C-------TTAGTGAT
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          182544 26 -   6883506 GA-------A--GAG-A-GAAGCA----T--G--TTT---A--------TAGAAGC
i Dasypus_novemcinctus.JH568778.1                       I 1 C 0
s Daubentonia_madagascariensis.ctg11                     16843804 18 +  31942871 AA-------G----------AT---------G--A-GTT---------TTGGCAAC
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80035715 27 -  96802777 AA-------GATGAGG----AA------TATA--C-T---A------TTTGGAGAT
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18697707 27 -  18957592 aagaaga-gg----------ag------aatg--c-C---A------TTCAGGGAC
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 321410 27 +    993696 AA-------GAAGAGG----AG------TATG--C-T---A------TTTGGAGAC
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   2062 27 +    151128 AA-------GAAGAGG----AG------TATG--C-T---A------TTTGGAGAC
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dipodomys_ordii.KN672545.1                              3655120 10 +   4240102 ------------------------------------C---A-------TTGGAGAT
i Dipodomys_ordii.KN672545.1                            I 8 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 26745  8 +     28912 AA-------GA-GA------AA----------------------------------
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 I 10
s Dolichotis_patagonum.DolPat_scaffold_14102                35063 20 -     73477 AA-------AAAG-------AG---------G--A-G---C-------TTAGTGAT
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22994154 20 -  44670279 aa-------g----aagaggGG-----CT-TG--G-T---G------CT-------
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 11076 27 +     24177 aagaaga-gg----------ag------aatg--c-T---A------TTTAGAGAC
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1490373 27 +   1727528 AAGAATA-GG----------AA------TATA--C-T---A------TTTGGAGAG
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        238466 21 -    369425 AT-------GACG-------AG---------G--CAC---A-------CTGAACAC
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           5576 21 -      7838 AT-------GA-CA------AG---------G--CAC---A-------CTGAACAC
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85870058 17 +  99434291 --------------------AT----CCT--G--A-----A------TTTGGAGAC
i Enhydra_lutris.KZ291749.1                             I 4 C 0
s Eptesicus_fuscus.JH977687.1                             4703101 27 +   6522550 AATAAGA-GG----------AG-A--A-T--G--C-C---A------TTTGGAGAC
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5851828 27 -   7175178 ag-------g----aagaggag------catg--C-T---G------TCTGGAGAC
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13350331 27 +  41866177 ag-------g----aagaggag------catg--C-T---G------TCTGGAGAC
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          11821 27 +     92910 ag-------g----aagaggag------catg--C-T---G------TCTGGAGAC
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11531384 17 +  16010500 --------------------AGCA----T--G--C-T---A------TTTGGAA-C
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48770225 14 -  48907691 ------------------------------------GGTGT------GTTGCAGAC
i Erythrocebus_patas.Contig8                            I 4 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          313921 27 +    330699 AA-------GAAGAGG----AA------TATA--C-T---A------TTTGGAGAT
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             60375 27 +     89355 AA-------GAAGAGG----AA------TATA--C-T---A------TTTGGAGAT
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              3995 21 +     13586 AA-------G----------AG---------G--A-GAAGT------TTTGGCAAC
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               3932 21 -      6809 AA-------G----------AG---------G--A-GAAGT------TTTGGCAAC
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            10405 21 +     36558 AA-------G----------AG---------G--A-GAAGT------TTTGGCAAC
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             6724 21 +     60246 AA-------G----------AG---------G--A-GAAGT------TTTGGCAAC
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                10203 21 +    109717 AA-------G----------AG---------G--A-GAAGT------TTTGGCAAC
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               14586 21 +     16540 AA-------G----------AG---------G--A-GAAGT------TTTGGCAAC
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                14859 21 +     27497 AA-------G----------AG---------G--A-GAAGT------TTTGGCAAC
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           17316 21 +     26808 AA-------G----------AG---------G--A-GAAGT------TTTGGCAAC
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                32051 21 +     46535 AA-------G----------AG---------G--A-GAAGT------TTTGGCAAC
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              14773 21 -     29447 AA-------G----------AG---------G--A-GAAGT------TTTGGCAAC
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129891230 24 - 159252932 AAGGA----A----------AGCA----T--G--C-T---A------TCTGGAGAC
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129278302 24 - 158578461 AAGGA----A----------AGCA----T--G--C-T---A------TCTGGAGAC
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 19437 24 +     52776 AAGGA----A----------AGCA----T--G--C-T---A------TCTGGAGAC
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13891669 20 -  19261668 AA-------GAAG-------AG---------A--A-G---C-------TTAGTGAT
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     209903 21 -    847004 AA-------G----------AA---------A--A-GTAGT------CTTGGCAAC
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           12282 21 -     43889 AA-------G----------AA---------A--A-GTAGT------CTTGGCAAC
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           9350 21 +     27357 AA-------G----------TC---------A--A-GTAGT------TTTGGCAAC
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               155223 17 +    324696 -A-------G----------GG---------G--A-A---C------GTTGGTGAC
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    180173 27 -    189561 AAGAATA-GG----------AA------TATA--C-T---A------TTTGGAGAG
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           11834 21 -     18683 AA-------GAAG-------AG---------G--C-C---C-----A-TCAGAGGT
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               4288 21 -     14630 AA-------G----------AA---------G--A-GGTAT------GTTGCAGAC
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119651387 21 - 195582420 AA-------G----------AA---------G--A-GGTAT------GTTGCAGAC
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   76564 21 +    118900 AA-------GAAG-------AG---------G--C-C---C-----A-TTGAAGAC
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                          796 21 +     10286 AA-------G----------AG---------G--A-GAAGT------TTTGGCAAC
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_1254239                            8972 21 +      9690 AA-------G----------AG---------G--A-GAAGT------TTTGGCAAC
i Hapalemur_gilberti.k141_1254239                       C 0 C 0
s Hapalemur_griseus.k141_1387522                             4601 21 +     56096 AA-------G----------AG---------A--A-GAAGT------TTTGGCAAC
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        27851 21 -     42470 AA-------G----------AG---------G--A-GAAGT------TTTGGCAAC
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        44475 21 -     54384 AA-------G----------AG---------G--A-GAAGT------TTTGGCAAC
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              15477 24 +     53719 AAGA----GA----------AGCA----T--G--C-T---T------TTAGGAGAC
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                26371 27 -     91191 AAGAATA-GG----------AA------TATA--C-T---A------TTTGGAGAG
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2550051 14 +  31725842 --------------------AG---------A--A-G---C-------TTAGAGAT
i Heterocephalus_glaber.JH602058.1                      I 3 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               56478 27 +     73687 AA-------GAA-A--A-GGAG-CG---T--G--T-G---T------TTTGGAAAC
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              145950 21 +    277961 AA-------G----------AA------TATG--C-T---A------TCTGGATAT
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 I 52
s Hipposideros_armiger.JXIK01001085.1                      277281 27 -    477199 aagaaga-gg----------ag------aatg--c-C---A------TTTGGAGGC
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              6440 27 -      9143 AAGAAGA-CG----------AGCA----T--G--C-C---T------TTTGGAGGC
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      3689 21 -   7690867 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Hoolock_leuconedys.ctg79                                 I 29 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 14571 24 -     67322 AAGA----GA----------AACA----T--G--T-T---A------TTAAGAGAC
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           17942 20 -    119109 TG-------AAAG-------AG---------G--A-G---C-------TTAGTGAT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              4115 21 +      5897 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_624065                                979 21 +      2112 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Hylobates_agilis.k141_624065                          C 0 C 0
s Hylobates_klossii.k141_466549                             10555 21 +     11537 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14623660 21 -  25970782 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                             916 21 -      2977 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     5117 20 +     22540 AA-------GAAG-------AG---------G--A-A---T-------TTAGTGAT
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7124840 11 +  13083262 ------------------------------------T---C-----A-CTGGAGAT
i Ictidomys_tridecemlineatus.JH393315.1                 I 7 C 0
s Indri_indri.k141_4418183                                    424 12 -      1457 --------------------------------------AGT------TTTGGCAAC
i Indri_indri.k141_4418183                              I 6 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               7701 27 +     17520 AA-------GAAGAGG----AA------TATA--C-T---A------TTTGGAGAT
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8564658 19 +  11848649 ---------GAAG-------AG---------G--CAC---C-------CTGAAGAT
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               22535 27 +     37189 AA-------GAAGAGG----AA------TATA--C-T---A------TTTGGAGAT
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          49137 21 -    147782 AG-------G----------AA---------G--A-AGTGT------GTTGCAGAG
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   112948 27 -    115756 AATAAGA-GG----------AG-A--A-T--G--T-C---A------TTTGGATAC
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258406156 21 - 285822530 AA-------G----------AG---------G--A-GAAGT------TTTGGCAAC
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        22919 21 +     39228 AA-------G----------AG---------G--A-GAAGT------TTTGGCACC
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            52294 21 +     63517 AA-------G----------AG---------G--A-GAAGT------TTTGGCAGC
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        77544 21 +    116806 AA-------G----------AG---------G--A-GAAGT------TTTGGCAGC
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     30558 21 -     33031 AA-------G----------AG---------G--A-GAAGT------TTTGGCAGC
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3084271 24 -   3498232 AAGA----GA----------AGCA----T--G--C-T---A------TTTGGAAAC
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    11924  6 +     22452 AA-------G----------AG---------G------------------------
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            134868 27 +   3060487 AA-------GAAGAGG----AA------TATA--C-T---A------TTTGGAGAT
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19247286 21 +  19376315 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            9667 21 +     84689 AA-------G----------AA---------A--A-GTAGT------TTTGGCAAC
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3777416 21 +   6799190 AA-------G----------AA---------A--A-GTAGT------TTTGGCAAC
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20591005 27 -  62548349 AA-------GAAGAG-A---AG------TATG--C-T---G------TTTGGAAAC
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11086078 24 +  39895028 AAGA----GA----------AGCA----T--G--C-T---A------TTTGCAGAC
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             19026 21 +     74745 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12705482 21 +  12821369 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                1127 21 -      3136 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           45944 21 +     63263 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                  647 21 -      2568 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 1233 21 -      7381 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  44451 21 -     79256 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196034559 21 + 196197964 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11444726 21 +  11645122 AA-------G----------AA---------G--A-GGCGT------GTTGCAGAC
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   3398 21 -     46448 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                1070 21 -     13212 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 14750 21 -     55006 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43839868 21 +  43892939 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               16037 21 -     24607 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               3403 21 -     27140 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                700490 27 +    802869 AAGAAGA-GG----------AG-A--A-T--T--C-C---A------TTTAGAAAC
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43436445 21 -  43563597 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4449271 21 -   4543643 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36872672  7 +  64221397 AA-------GA-GA------A-----------------------------------
i Marmota_marmota.CZRN01000005.1                        C 0 I 11
s Megaderma_lyra.MegLyr_scaffold_3562                       63288 27 -    234502 GACAA-ATGC----------AG-A--A-T--G--T-C---A------TTTGGAGAC
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_146202             864 24 -      1999 AAGA----GA----------AGCA--A----G--C-T---C------TTTGGAGAC
i Mellivora_capensis.MelCap_flattened_line_146202       C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               11382 21 +     15977 AT-------GAA-A------AG---------T--TAC---A-------CTGGCCAT
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1045646 21 -  26018355 AT-------GAA-A------CT---------G--CAC---A-------CTGGGCAT
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Microcebus_murinus.CM007691.1                          16509161 21 +  47401472 AA-------G----------AA---------G--A-GAAGT------GTTGGCAAC
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  30582 27 -     48017 AA-------GAAGAGG----AG-TG---T--G--G-T---G------CTTGGAAAC
i Microgale_talazaci.MicTal_scaffold_34660              C 0 I 1
s Micronycteris_hirsuta.MicHir_scaffold_37978               21583 27 -     32043 ACGAAGA-GG----------AG-AG-----CA--C-C---T------TCCAGGGAC
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22818756 21 -  98408828 AT-------GAAG-------AG---------G--CAC---A-------CTGAGCAC
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8208574 27 +  10048721 aggaaga-gg----------gg------aatg--C-C---A------CTTGGAGAC
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            33230 27 +     45743 AGGAAGA-AG----------GG-A--A-T--G--C-C---G------TTTGGAGAC
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                          998 21 +     29742 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         9779 24 -    104932 AAGA----GA----------AGCA----T--G--C-T---A------TTTGGAGAC
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     4551 21 +      8497 AA-------G----------AA---------G--A-GAAGT------GTTGGCAAC
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 145303 27 +    154973 AA-------GATGAGG----AA------TATA--C-T---A------TTTGGAGAT
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                160091 27 +    265003 AAAAAGA-GG----------AG-A--A-T--G--T-C---A------TTCAGTGAC
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 3474 27 -      4346 AAGAATA-GG----------AA------TATA--C-T---A------TTTGGAGAG
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  143168 24 -    168139 AAGA----GA----------AGCA----T--G--G-T---T------TTAAGAGAC
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          18464 27 -    100666 AATAAGA-GG----------AG-A--A-T--C--C-C---A------CTTGGAGAC
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70765253 21 +  92629107 ag-------g-------aagag---------g--cac---a-------CTGACCAT
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75488290 21 +  98207768 ag-------g-------aagag---------g--cac---a-------cTGACCAT
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67554533 14 +  89017189 ag-------g-------aagag---------a--cac---a--------------T
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74329469 21 +  97876770 ag-------g-------aagag---------g--cac---a-------CTGACCAT
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             10545 21 +     98495 AA-------GAAG-------AA---------T--C-T---C-----A-TTGGAGAT
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4422436 24 -  28371801 AAGA----GA----------AGCA----T--G--C-T---C------TTTGGAGAC
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     89004 18 -    117718 AA-------TAAG-------AG---------G--A-G---C-------TTACTG--
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               966766 27 +   8389877 AATAAGA-GG----------AG-A--A-T--G--C-C---A------TTTGGAGAC
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5018442 27 +   6462685 AATAAGA-GG----------AG-A--A-T--G--C-T---A------TTTGGAGAC
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3464346 27 -   3747815 AATAAGA-GG----------AG-A--A-T--G--C-C---A------TTTGGAGAC
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         9561 27 +     66751 AATAAGA-GG----------AG-A--A-T--G--C-C---A------TTTGGAGAC
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3942 26 -      8794 AA-------G--GAG-A-GGAG----CCT--G--T-T---A-------ATTGCTAT
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        I 10 C 0
s Nannospalax_galili.KL201303.1                            117117 21 +    362372 AA-------G--G--TA---AG---------T--TGC---A-------CTGGAGAT
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               7500 21 +     48152 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4483171 24 -  14209539 AAGA----GA----------AGCA----T--G--C-T---A------TTTGGAGAC
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3949916 27 -   4490290 AA-------GATGAGG----AA------TATA--C-T---A------TTTGGAGAT
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  48201 19 +     94413 ---------G----------AG-A--A-T--G--C-C---A------TTCAAAGAA
i Noctilio_leporinus.NocLep_scaffold_12062              I 5 C 0
s Nomascus_annamensis.k141_302224                             957 21 +      1516 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Nomascus_annamensis.k141_302224                       I 22 C 0
s Nomascus_concolor.k141_226614                               217 21 -      5092 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_642452                            1000 21 +      2851 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_a.k141_595747                                  1638 21 +      4512 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                29110 24 +   3668941 AAGA----GA----------AGCA----T--G--C-T---A------TTTGCAGAC
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65566101 21 -  95554990 AA-------G----------AG---------A--A-GTAGT------TTTGGCAAC
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            2830 21 +      6470 AA-------G----------AG---------A--A-GTAGT------TTTGGCAAC
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65668439 21 +  89412551 AA-------G----------AA---------A--A-GTAGT------TTTGGCAAC
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4994997 18 -  23139505 AT-------G----------AG---------G--C-A---C------ATTAGCTGT
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3684542 20 +  10294119 AC-------TAA-A------AG---------G--A-G---C-------TTAgtgat
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             677816 24 -   3126709 AAGA----GA----------AGCA----T--G--C-T---A------TTTGGAGAC
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1078603 27 +   1425656 AAGAATA-GG----------AA------TATA--C-T---A------TTTGGAGAG
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         35899 27 +     78940 AAGAATA-GG----------AA------TATA--C-T---A------TTTGGAGAG
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  124012 21 +    145789 AA-------GACG-------AA---------G--CAC---A-------CTGAGCAC
i Ondatra_zibethicus.OndZib_scaffold_6821               I 4 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  35784 20 +     62360 GT-------GAAG-------AG---------G--CAC---T-------CTG-GCAT
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7223600 27 -   7562323 AA-------GATGAGG----AA------TATA--C-T---A------TTTGGAGAT
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              43323 27 -     66828 AA-------GAA-A--A-GAAGCA----T--A--C-T---A------TTTGGAAAC
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141874948  6 + 163896628 AA-------G----------AG---------G------------------------
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      306395 24 -    505867 AAGA----GA----------AGCA----T--G--C-T---A------TTTGCAGAC
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       37999 21 +     38679 AA-------G----------AA---------A--A-GTAGT------TTTGGCAAC
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18007427 21 -  38779656 AA-------G----------AA---------A--A-GTAGT------TTTGGCAAC
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134076165 27 - 275406953 AAGAATA-GG----------AA------TATA--C-T---A------TTTGGAGAG
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      77379 27 +    140051 AAGAATA-GG----------AA------TATA--C-T---A------TTTGGAGAG
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127573648 21 - 205426864 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120150801 21 - 196562556 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Pan_troglodytes.CM009241.2                            I 35 I 7
s Panthera_onca.PanOnc_flattened_line_1615                  32631 24 +    295523 AAGGA----A----------AGCA----T--G--C-T---A------TCTGGAGAC
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3636365 24 +  18214204 AAGGA----A----------AGCA----T--G--C-T---A------TCTGGAGAC
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5026012 24 -   6340057 AAGGA----A----------AGCA----T--G--C-T---A------TCTGGAGAC
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1065026 27 -   1292953 AAGAATA-GG----------AA------TATA--C-T---A------TTTGGAGAG
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188155236 21 - 188283584 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             3553 21 +      5367 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47512624 21 +  47705337 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 66602 21 -    104429 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    5134 21 +     14967 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                  995 21 -      7628 AA-------G----------AA---------G--T-GGTGT------GTTGCAGAC
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113948 24 -    135482 AAGA----GA----------AA------TATG--C-T---A------CTTAGAGAC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           4422 12 -     23713 --------------------------------------AGT------TTGGGCAAC
i Perodicticus_ibeanus.k141_117958                      I 6 C 0
s Perodicticus_potto.k141_713187                            23722 21 -     27972 AA-------G----------AA---------A--A-GTAGT------TTGGGCAAC
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      42585 10 -     45160 ------------------------------------C---T-------TTGGAGAT
i Perognathus_longimembris.PerPac_flattened_line_22291  I 8 C 0
s Peromyscus_maniculatus.KI615518.1                       4948972 21 -   8017169 AT-------GAAG-------AG---------G--CAC---A-------CTGGGCAT
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    11477 20 -     36578 AA-------G--GAG-----AG---------A--A-G---A-------TGAGTGAT
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            120217 27 -    122454 AA-------GATGAGG----AA------TATA--C-T---A------TTTGGAGAT
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1987485                           1022 21 -      5908 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       1642 21 -     17985 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            1009 21 +      7694 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26739487 21 +  26888534 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pithecia_albicans.k141_991845                             42619 21 -     61926 AG-------G----------AA---------G--A-AGTGT------GTTGCAGAG
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        24050 21 +     78826 AG-------G----------AA---------G--A-AGTGT------GTTGCAGAG
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              7999 21 -     15800 AG-------G----------AA---------G--A-AGTGT------GTTGCAGAG
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        11197 21 -     16101 AG-------G----------AA---------G--A-AGTGT------GTTGCAGAG
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          4506 21 +      9673 AG-------G----------AA---------G--A-AGTGT------GTTGCAGAG
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13473502 21 -  19735023 AG-------G----------AA---------G--A-AGTGT------GTTGCAGAG
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           12408 21 -     31692 AG-------G----------AA---------G--A-AGTGT------GTTGCAGAG
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           4285 27 +     21690 AA-------GAAGAGG----AA------TATA--C-T---A------TTTGGAGAT
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       21843 21 +     44506 AG-------G----------AA---------G--A-AGTGT------ATTGCAGAG
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        22055 21 +     67491 AG-------G----------AA---------G--A-AGTGT------ATTGCAGAG
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      12294 21 -     98129 AG-------G----------AA---------G--A-AGTGT------ATTGCAGAG
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     21894 21 +    147771 AG-------G----------AA---------G--A-AGTGT------ATTGCAGAG
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        22149 21 -     23762 AG-------G----------AA---------G--A-AGTGT------ATTGCAGAG
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          2615 21 -     55515 AG-------G----------AA---------G--A-AGTGT------ATTGCAGAG
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         21968 21 +    152463 AG-------G----------AA---------G--A-AGTGT------ATTGCAGAG
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      8728 21 +      8943 AG-------G----------AA---------G--A-AGTGT------ATTGCAGAG
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                         11690 21 +    134592 AG-------G----------AA---------G--A-AGTGT------ATTGCAGAG
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          22278 21 -     75465 AG-------G----------AA---------G--A-AGTGT------ATTGCAGAG
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              186173 21 -    373494 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19806821 21 +  19899266 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               4744 21 -     15069 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              4878 21 +     14865 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                76342 27 +     78963 AA-------GAA-A--A-GGAG-CG---T--G--T-G---T------TTTGGAAAC
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6847537 21 +  12164890 AA-------G----------AG---------G--A-GAAGT------TTTGGCAAC
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    666765 12 -   2312742 --------------------------------------AGT------TTTGGCAAC
i Propithecus_coquerelli.NW_012147997.1                 I 6 C 0
s Propithecus_coronatus.k141_1353159                         2592 12 +     11805 --------------------------------------AGT------TTTGGCAAC
i Propithecus_coronatus.k141_1353159                    I 6 C 0
s Propithecus_diadema.k141_577245                           41928 12 +     52369 --------------------------------------AGT------TTTGGCAAC
i Propithecus_diadema.k141_577245                       I 6 C 0
s Propithecus_edwardsi.k141_1317105                         34318 12 -     44753 --------------------------------------AGT------TTTGGCAAC
i Propithecus_edwardsi.k141_1317105                     I 6 C 0
s Propithecus_perrieri.k141_7554                            16238 12 +     27322 --------------------------------------AGT------TTTGGCAAC
i Propithecus_perrieri.k141_7554                        I 6 C 0
s Propithecus_tattersalli.k141_907138                       15874 12 -     53241 --------------------------------------AGT------TTTGGCAAC
i Propithecus_tattersalli.k141_907138                   I 6 C 0
s Propithecus_verreauxi.k141_158021                         38146 12 -     48185 --------------------------------------AGT------TTTGGCAAC
i Propithecus_verreauxi.k141_158021                     I 6 C 0
s Psammomys_obesus.NESX01026517.1                           32920 21 +     77221 AT-------GAA-A------AG---------T--TAC---A-------CTGGCTAT
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            2757 27 -     27784 aagaaga-gg----------aa------acta--C-C---A------TTCAGGCAC
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        244530 24 -    344369 AAGA----GA----------AGCA----T--G--C-T---C------TTTGGAGAC
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13244877 27 -  17261082 aagaaga-gg----------ag------aatg--c-c---a------tttagagaa
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             602827 27 -   3946241 AAGAaga-gg----------gg------aatg--c-c---a------tttagagaa
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131532595 24 - 161321710 AAGGA----A----------AGCA----T--G--C-T---A------TCTGGAGAC
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             28862 21 +     56732 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6805353 21 +   6970761 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             4747 21 +     18040 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                14680 27 +     68503 AAGAATA-GG----------AA------TATA--C-T---A------TTTGGAGAG
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13914295 21 +  90463843 AT-------AAAG-------AG---------G--TAC---A-------CTGGCCGT
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1786687 27 +   2252614 aagaaga-gg----------ag------aatg--c-T---A------CTTGGAGAC
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_1391695                            975 21 -      1866 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Rhinopithecus_bieti.k119_1391695                      C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206376632 21 - 206558726 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44855532 21 -  45163003 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                18167 27 +    109198 AAGAAGA-GG----------AG-A--A-T--G--C-C---A------TTTAGAGAC
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       6482 27 +     12214 AAGAATA-AG----------AA------TATA--C-T---A------TTTGGAGAG
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15671706 21 -  43202129 AG-------G----------AA---------G--A-AGCGT------GTTGCAGAG
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        3623 21 +     34089 AG-------G----------AA---------G--A-AGCGT------GTTGCAGAG
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              3564 21 -     60842 AG-------G----------AA---------G--A-AGCGT------GTTGCAGAG
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              3659 21 +     67014 AG-------G----------AA---------G--A-AGCGT------GTTGCAGAG
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              3637 21 +     60816 AG-------G----------AA---------G--A-AGCGT------GTTGCAGAG
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 3574 21 -     76454 AG-------G----------AA---------G--A-AGCGT------GTTGCAGAG
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17340300 21 -  30362882 AG-------G----------AA---------G--A-AGTGT------GTTGCAGAG
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         19659 21 -     62485 AG-------G----------AA---------G--A-AGTGT------GTTGCAGAG
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   30256 21 -    114521 AG-------G----------AG------TATG--C-C---A------TTTGGAGAG
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        2359 21 +     15331 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       7756 21 +     20762 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         117754 21 +    130994 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           36545 21 +     46263 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     29659 21 +     42640 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        12703 21 +     30600 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   98555 21 -    120886 AT-------G--GAG-----AG---------G--CAC---A-------CAGGGCAT
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            16876 21 +    739146 AG-------G----------AGCA----T--G--C-T---A------TATGGAGAT
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17749508 18 -  27805282 --------------------AG------TACA--T-T---A------ATTGGAGAC
i Sorex_araneus.JH798170.1                              I 3 C 0
s Spermophilus_dauricus.KZ294190.1                        2238760 11 +   2842873 ------------------------------------T---C-----A-CTGGAGAT
i Spermophilus_dauricus.KZ294190.1                      I 7 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             233281 24 -    276980 AAGA----GA----------AGCA----T--G--T-T---C------TTTGGAGAT
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            25834 24 +     62062 AAGA----GA----------AGCA----T--A--C-T---T------TTAAGAGAC
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189270752 27 + 218635234 AA-------A----------AAGAGGATTATA--C-T---A------TTTGGAAAC
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        13917 21 -  13920577 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               4923 26 -      6213 -AGAAGA-GG----------AG-A--A-T--G--C-C---A------TTGGTAGAC
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               13617 26 +     45698 AA-------G--GAG-A-GGAG----CCT--G--T-T---A-------ATTGCTAT
i Tamandua_tetradactyla.TamTet_scaffold_26877           I 10 C 0
s Tapirus_indicus.TapInd_scaffold_176                      805615 31 +   1148477 AA-------GAAGAGGAAGGAA------TATG--C-T---A------CATGCAGAC
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  56285 18 +     99546 --------------------AA------TATG--C-T---A------CATGCAGAC
i Tapirus_terrestris.TapTer_scaffold_14939              I 10 C 0
s Tarsius_lariang.k141_609102                               25453 11 +     42269 ---------------------------------------AT------GTTGGAAAC
i Tarsius_lariang.k141_609102                           I 5 C 0
s Tarsius_wallacei.k141_48636                               58769 11 +     65473 ---------------------------------------AT------GTTGGAAAC
i Tarsius_wallacei.k141_48636                           I 5 C 0
s Theropithecus_gelada.CM009951.1                       194006763 21 - 194193292 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             38272 20 -     47444 AA-------CAAG-------AG---------G--A-G---A-------CGAGTGAT
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  4478 28 +      6782 GG-------G--GAG-AA-AAGCA------CG--TTT---C------TTTGGAAGC
i Tolypeutes_matacus.TolMat_scaffold_269431             I 1 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  134767 27 -    259118 AAGAAGA-GG----------AG-A--A---CG--C-C---A------TTCAGAGAC
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        25866 21 +     38948 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   19593 21 -     32910 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                       980 21 -     12939 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                        915 21 -     14244 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           42313 21 -     54611 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_878600                        1143 21 +      1165 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Trachypithecus_germaini.k141_878600                   C 0 N 0
s Trachypithecus_hatinhensis.k141_504423                     2291 21 -     15592 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                           948 21 +     14371 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  50700 21 +     51589 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       13881 21 +     14732 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       4353 21 -     28054 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44659153 21 -  44834318 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       1456 21 +     13828 AA-------G----------AA---------G--A-GGTGT------GTTGCAGAC
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   4064 24 +     90398 AAGAA----G----------AA------TATA--C-C---A------TTTGGAGAG
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16081467 27 +  31416278 aa-------g----aagagaag------cacg--c-t---a------tttggaaac
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2791765 13 -   3938065 AA-------G----------AA---------G--A-G---C------ATTG-----
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    4033 13 +     13056 AA-------G----------AA---------G--A-G---C------ACTG-----
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69312317 27 -  96451834 AA-------GATGAGG----AA------TATA--C-T---A------TTTGGAGAT
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_139357                   783 21 +      2103 GA-------A----------AACA----T--G--C-C---A------TTTGGAGAT
i Uropsilus_gracilis.UroGra_scaffold_139357             C 0 C 0
s Ursus_maritimus.KK498671.1                              6513077 22 +  28682327 AAGA----GA----------AGCA----T--G--C-T---A------TTTGG--AC
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  4241 21 -     20643 AA-------G----------AG---------G--A-GAAGT------TTTGGCAAC
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             23782 21 -     33872 AA-------G----------AG---------G--A-GAAGT------TTTGGCAAC
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1523555 27 -   2331223 AA-------GAAGAGG----AA------TATA--C-T---G------TTTGGAGAC
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                136479 24 -    281493 AAGA----GA----------AGCA----T--G--C-T---A------TTTGCAGAC
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       125863 11 -    134049 ------------------------------------T---C-----A-CTGGAGAT
i Xerus_inauris.XerIna_scaffold_7898                    I 7 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        212551 24 -    227762 AAGA----GA----------AGCA----T--G--C-T---A------TTTGGAGAC
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           5814 27 -      8775 AA-------GAAGAGG----AA------TATA--C-T---A------TTTGGAGAT
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Dinomys_branickii.DinBra_scaffold_1996                   156356 54 +    228994 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            96162  0 +    112873 C
e Manis_pentadactyla.KN017078.1                             35015 87 +     58827 I
e Manis_javanica.JSZB01003966.1                            144940 87 +    252755 I
e Elephantulus_edwardii.JH947210.1                        7804622 10712 +  15467074 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     14107 296 -     20485 I
e Hylobates_pileatus_a.tarseq_592                             33311  5 -     60944 I
e Nomascus_siki_b.tarseq_80                             24175  0 -  18771707 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               10924  7 +    209709 CA---AGG-GA
s Acinonyx_jubatus.LLWD01000356.1                         2032278  7 +   3721120 CA---AGT-CA
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    111277  7 -    189883 CA---AGG-CA
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10655623  7 +  23371972 CA---AGG-CA
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7092550  7 -  16596857 CA---AGG-CA
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   11946  7 -     22067 GA---AGG-CA
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                    283  7 -     60446 CA---AGG-GA
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         1002  7 -     29318 CA---AGG-GA
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_21674                           1219  7 -      1421 CA---AGG-GA
i Allochrocebus_preussi.k141_21674                      C 0 C 0
s Allochrocebus_solatus.k141_371672                           896  7 -     80423 CA---AGG-GA
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             9189  7 -     18050 CA---AGG-GA
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                 10279  7 -     11521 CA---AGG-GA
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              9866  7 -     21359 CA---AGG-GA
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_298055                                 1162  7 +      1823 CA---AGG-GA
i Alouatta_juara.k141_298055                            C 0 C 0
s Alouatta_macconnelli.k141_1331706                          9162  7 -     10438 CA---AGG-GA
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            5818  7 +      7047 CA---AGG-GA
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             9098  7 +     10410 CA---AGG-GA
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            2908  7 -      4927 CA---AGG-GA
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             5837  7 +      6429 CA---AGG-GA
i Alouatta_seniculus.k141_990213                        C 0 I 22
s Ammotragus_lervia.NIVO01013474.1                        3519051  6 +   4113121 GA---AG--CC
i Ammotragus_lervia.NIVO01013474.1                      C 0 I 5
s Anoura_caudifer.AnoCau_scaffold_422                      389224  7 -    631301 CC---AGG-CA
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            29632  7 +     33004 GA---AGG-GC
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 I 5
s Aotus_azarae.k141_3170768                                 61548  7 +     78111 CA---AGG-GA
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            4489  7 +     22701 CA---AGG-GA
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5748446  7 +   9889416 CA---AGG-GA
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             5031  7 -    104377 CA---AGG-GA
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               5037  7 +     23246 CA---AGG-GA
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     2700  7 +      5067 CA---AGG-TA
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      17219  7 +     17483 TA---AGG-GA
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 7627  6 -     29036 -C---AGG-CG
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9538294  7 +  39197703 CA---AGG-GA
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             59565  7 +     85812 CA---AGG-GA
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                10577  7 +     89302 CA---AGG-GA
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             15082  7 -     58268 CA---AGG-GA
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             63073  7 +    119057 CA---AGG-GA
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               5042  7 -     25888 CA---AGG-GA
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 5675  6 -     16375 CA---AGG-G-
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              1995  6 +      2719 CA---AGG-G-
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26379063  7 +  51448160 GA---AGG-CC
i Balaenoptera_acutorostrata.KI537095.1                 C 0 I 5
s Balaenoptera_bonaerensis.DF502048.1                        4295  7 -     13118 GA---AGG-CC
i Balaenoptera_bonaerensis.DF502048.1                   C 0 I 5
s Beatragus_hunteri.BeaHun_scaffold_21644                   42113  7 -     72089 GA---AGG-CC
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 I 5
s Bison_bison.KN264915.1                                  6558425  7 +   6870073 GA---AGG-CC
i Bison_bison.KN264915.1                                C 0 I 4
s Bos_indicus.CM003021.1                                138138651  7 - 161108492 GA---AGG-CC
i Bos_indicus.CM003021.1                                C 0 I 4
s Bos_mutus.JH883513.1                                     571038  7 -    998990 GA---AGG-CC
i Bos_mutus.JH883513.1                                  C 0 I 4
s Bos_taurus.CM000177.6                                 136294384  7 - 158972876 GA---AGG-CC
i Bos_taurus.CM000177.6                                 C 0 I 4
s Bubalus_bubalis.KI419065.1                              1230151  7 -   1914593 GA---AGA-CC
i Bubalus_bubalis.KI419065.1                            C 0 I 4
s Cacajao_ayresi.k141_724503                               112935  7 -    171031 CA---AGG-GA
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 11963  7 +    125063 CA---AGG-GA
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                14008  7 -    216513 CA---AGG-GA
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        6548  7 -    134917 CA---AGG-GA
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3218475  7 -   8989139 AA---AGG-CC
i Camelus_bactrianus.KN276303.1                         C 0 I 5
s Camelus_dromedarius.KN271192.1                           396180  7 -  15254737 AA---AGG-CC
i Camelus_dromedarius.KN271192.1                        C 0 I 5
s Camelus_ferus.KB016973.1                                2971913  7 +   6889770 AA---AGG-CC
i Camelus_ferus.KB016973.1                              C 0 I 5
s CanFam4.chr31                                          11517449  7 +  39901454 CA---AGG-CA
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   12474  7 +     87036 CA---AGG-CA
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11264114  7 -  35597290 CA---AGG-CA
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11086646  7 +  39895921 CA---AGG-CA
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16453665  7 -  44759192 CA---AGG-CA
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21324127  6 + 157394656 GA---AG--CC
i Capra_aegagrus.CM003214.1                             C 0 I 5
s Capra_hircus.CM004562.1                               135705354  6 - 157403528 GA---AG--CC
i Capra_hircus.CM004562.1                               C 0 I 5
s Capromys_pilorides.CapPil_scaffold_979108                   957  6 -      1248 -A---A-AATA
i Capromys_pilorides.CapPil_scaffold_979108             I 18 C 0
s Carlito_syrichta.NW_007248099.1                          307980  7 +    345090 CA---AGG-GA
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               58425  7 +     67245 CC---AGG-CA
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   29646  7 +     33760 AA---AGG-AA
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   157689  7 -    276539 GA---AGG-CC
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 I 5
s Cavia_aperea.AVPZ01000278.1                            15785592  7 -  24422027 NN---N-NNNN
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15797526  7 -  24440124 CA---A-ACTG
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       175717  7 +    436027 CA---A-ACTG
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18889778  7 -  29618158 CA---AGG-GA
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 7322  7 -     26817 CA---AGG-GA
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                11562  7 +     25043 CA---AGG-GA
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         7013  7 +     21754 CA---AGG-GA
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4362790  7 +   7569818 CA---AAG-CA
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         2542  7 -      9338 CA---AAG-CA
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6554218  7 +   6739814 CA---AGG-GA
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      25695  7 +     60454 CA---AGG-GA
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                           900  7 -     21101 CA---AGG-GA
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         58210  7 -    107033 CA---AGG-GA
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        1102  7 -     17608 CA---AGG-GA
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          28597  7 +     30494 CA---AGG-GA
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          57443  7 -     59240 CA---AGG-GA
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          1144  7 +     16677 CA---AGG-GA
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           23302  7 +     35983 CA---AGG-GA
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11989830  7 +  12117833 CA---AGG-GA
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46476588  7 +  46592721 CA---AGG-GA
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      40139  7 -     45581 CA---AGG-GA
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       1145  7 +     35577 CA---AGG-GA
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                         921  7 -     25661 CA---AGG-GA
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                         899  7 -     17744 CA---AGG-GA
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        20508  7 +     37128 CA---AGG-GA
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           1738  7 -      6963 CA---GGG-TG
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           57972  6 -     68416 CA---AGG-G-
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            7015  6 +     13308 CA---AGG-G-
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             4578  7 -     18223 CA---AGG-GA
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             21601  7 +     25473 CA---AGG-GA
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           40636  7 +     57117 CA---AGG-GA
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          45315  7 +     54541 CA---AGG-GA
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15960733  7 +  43084221 ca---a-aata
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         70137  7 +    196370 CA---AGG-GA
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          14317  7 +     40510 CA---AGG-GA
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15138061  7 -  15256731 CA---AGG-GA
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      33108  7 -     53260 CA---AGG-GA
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101143672  7 + 101219884 CA---AGG-GA
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                15405  7 -     21363 AA---AGG-CA
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           760713  7 +    964067 AA---AGG-CA
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10885438  7 +  10971483 CA---AGG-GA
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147663602  7 + 156195979 CA---AGG-GA
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            15587  7 +     23629 CA---AGG-GA
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60611534  7 +  78930452 TA---AGG-AA
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         38528  7 -     40477 CA---AGG-TA
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 277244  7 -    399297 CA---AGG-AA
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53027929  7 +  72327488 CA---AGG-CA
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             18573  2 -     19186 TA---------
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            50293  7 -     70449 CA---AAT-CA
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 12 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  207146  7 -    956709 TA---AGT-CA
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 29721  7 -     67205 TT---A-AATG
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                16744  7 +     26546 CA---A-AATA
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             57836  7 -    236241 CA---A-AATA
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          182570  7 -   6883506 CT---GGG-TG
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16843822  7 +  31942871 CA---AGG-GG
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80035742  7 -  96802777 GA---AGG-CC
i Delphinapterus_leucas.KZ290064.1                      C 0 I 5
s Desmodus_rotundus.KZ672188.1                           18697734  7 -  18957592 CC---GGG-CA
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 321437  7 +    993696 CA---AAG-CA
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   2089  7 +    151128 CA---AAG-CA
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dipodomys_ordii.KN672545.1                              3655130  7 +   4240102 CA---AGG-AA
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 26763  7 +     28912 CA---AGG-GA
i Dipodomys_stephensi.DipSte_scaffold_44365             I 10 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                35083  7 -     73477 CA---A-AATA
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Eidolon_helvum.KE772537.1                                 11103  7 +     24177 TA---AGG-CA
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1490400  7 +   1727528 GA---AGG-CC
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 I 5
s Ellobius_lutescens.LOEQ01003611.1                        238487  7 -    369425 CA---AGG-CA
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           5597  7 -      7838 CA---AGG-CA
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85870075  7 +  99434291 CG---AGG-CA
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4703128  7 +   6522550 CA---ATG-CT
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5851855  7 -   7175178 CA---AGG-CC
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13350358  7 +  41866177 CA---AGG-CC
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          11848  7 +     92910 CA---AGG-CC
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11531401  7 +  16010500 AA---AGC-TA
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48770239  7 -  48907691 CA---AGG-GA
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          313948  7 +    330699 GA---AGG-CC
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 I 5
s Eubalaena_japonica.EubJap_flattened_line_7756             60402  7 +     89355 GA---AGC-CC
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 I 5
s Eulemur_albifrons.k141_715837                              4016  6 +     13586 CA---AGG-G-
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               3953  6 -      6809 CA---AGG-G-
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            10426  6 +     36558 CA---AGG-G-
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             6745  6 +     60246 CA---AGG-G-
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                10224  6 +    109717 CA---AGG-G-
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               14607  6 +     16540 CA---AGG-G-
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                14880  6 +     27497 CA---AGG-G-
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           17337  6 +     26808 CA---AGG-G-
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                32072  6 +     46535 CA---AGG-G-
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              14794  6 -     29447 CA---AGG-G-
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129891254  7 - 159252932 CA---AGT-CA
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129278326  7 - 158578461 CA---AGT-CA
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 19461  7 +     52776 CA---AGT-CA
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13891689  7 -  19261668 CA---A-AACA
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     209924  7 -    847004 TA---AGG-GA
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           12303  7 -     43889 GA---AGG-GA
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           9371  7 +     27357 TA---AGG-GA
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               155240  7 +    324696 CA---AGG-CA
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    180200  7 -    189561 GA---AGG-CC
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 I 5
s Glis_glis.GliGli_scaffold_79770                           11855  7 -     18683 CA---AGG-CA
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               4309  7 -     14630 AA---AGG-GA
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119651408  7 - 195582420 AA---AGG-GA
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   76585  7 +    118900 GA---AGG-CA
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                          817  6 +     10286 CA---AGG-G-
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_1254239                            8993  6 +      9690 CA---AGG-G-
i Hapalemur_gilberti.k141_1254239                       C 0 C 0
s Hapalemur_griseus.k141_1387522                             4622  6 +     56096 CA---AAG-G-
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        27872  6 -     42470 CA---AGG-G-
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        44496  6 -     54384 CA---AGG-G-
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              15501  7 +     53719 CA---AAT-CA
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                26398  7 -     91191 GA---AGG-CC
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 I 5
s Heterocephalus_glaber.JH602058.1                        2550065  7 +  31725842 CA---A-AATA
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               56505  7 +     73687 CA---AGA-CA
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              146023  7 +    277961 AA---ATG-CC
i Hippopotamus_amphibius.HipAmp_scaffold_1308           I 52 I 5
s Hipposideros_armiger.JXIK01001085.1                      277308  7 -    477199 TA---AGG-CG
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              6467  7 -      9143 TA---AGG-CA
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      3710  7 -   7690867 CA---AGG-GA
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 14595  7 -     67322 CA---AGT-CT
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           17962  7 -    119109 CA---A-AATA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              4136  7 +      5897 CA---AGG-GA
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_624065                               1000  7 +      2112 CA---AGG-GA
i Hylobates_agilis.k141_624065                          C 0 C 0
s Hylobates_klossii.k141_466549                             10576  7 +     11537 CA---AGG-GA
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14623681  7 -  25970782 CA---AGG-GA
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                             937  7 -      2977 CA---AGG-GA
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     5137  8 +     22540 CA---AAAATA
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7124851  7 +  13083262 CA---AGG-CA
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_4418183                                    436  6 -      1457 CA---AGG-G-
i Indri_indri.k141_4418183                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               7728  7 +     17520 GA---AGG-CC
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 I 219
s Jaculus_jaculus.JH725517.1                              8564677  7 +  11848649 GA---AGG-CA
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               22562  7 +     37189 GA---AGG-CC
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 I 5
s Lagothrix_lagothricha.k141_12968                          49158  7 -    147782 CA---AGG-GA
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   112975  7 -    115756 CA---ATG-CT
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258406177  6 - 285822530 CA---AGG-G-
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        22940  6 +     39228 CA---AGG-G-
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            52315  6 +     63517 CA---AGG-G-
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        77565  6 +    116806 CA---AGG-G-
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     30579  6 -     33031 CA---AGG-G-
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3084295  7 -   3498232 CA---AAA-CA
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    11930  7 +     22452 CA---AGG-TA
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            134895  7 +   3060487 GA---AGG-CC
i Lipotes_vexillifer.KE558548.1                         C 0 I 5
s Lophocebus_aterrimus.ctg55                             19247307  7 +  19376315 CA---AGG-GA
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            9688  7 +     84689 TA---AGG-TA
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3777437  7 +   6799190 TA---AGG-TA
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20591032  7 -  62548349 CA---TGG-CA
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11086102  7 +  39895028 CA---AGG-CA
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             19047  7 +     74745 CA---ACG-GA
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12705503  7 +  12821369 CA---ACG-GA
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                1148  7 -      3136 CA---ACG-GA
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           45965  7 +     63263 CA---ACG-GA
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                  668  7 -      2568 CA---ACG-GA
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 1254  7 -      7381 CA---ACG-GA
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  44472  7 -     79256 CA---ACG-GA
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196034580  7 + 196197964 CA---ACG-GA
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11444747  7 +  11645122 CA---ACG-GA
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   3419  7 -     46448 CA---ACG-GA
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                1091  7 -     13212 CA---ACG-GA
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 14771  7 -     55006 CA---ACG-GA
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43839889  7 +  43892939 CA---ACG-GA
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               16058  7 -     24607 CA---ACG-GA
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               3424  7 -     27140 CA---ACG-GA
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                700517  7 +    802869 CA---AGA-TA
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43436466  7 -  43563597 CA---AGG-GA
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4449292  7 -   4543643 CA---AGG-GA
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36872690  7 +  64221397 CA---AGG-CA
i Marmota_marmota.CZRN01000005.1                        I 11 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       63315  7 -    234502 CA---GGG-CA
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_146202             888  7 -      1999 CG---AGG-CA
i Mellivora_capensis.MelCap_flattened_line_146202       C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               11403  7 +     15977 CA---AGG-CA
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1045667  7 -  26018355 CA---AGG-CA
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Microcebus_murinus.CM007691.1                          16509182  6 +  47401472 CA---AGG-G-
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  30610  6 -     48017 -A---AGG-CA
i Microgale_talazaci.MicTal_scaffold_34660              I 1 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               21610  7 -     32043 CC---AGG-CA
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22818777  7 -  98408828 CA---AGG-CA
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8208601  7 +  10048721 CA---ATG-CT
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            33257  7 +     45743 CA---ATG-CT
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         1019  7 +     29742 CA---AGG-GA
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         9803  7 -    104932 CA---AAA-CA
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     4572  6 +      8497 CA---CGG-G-
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 145330  7 +    154973 GA---AGG-CC
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 I 5
s Mormoops_blainvillei.MorMeg_scaffold_2952                160118  7 +    265003 CA---AGG-CA
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 3501  7 -      4346 GA---AGG-CC
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 I 5
s Mungos_mungo.MunMun_flattened_line_8729                  143192  7 -    168139 CA---AAT-CA
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          18491  7 -    100666 CA---ATG-CT
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70765274  7 +  92629107 CA---AGA-CA
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75488311  7 +  98207768 CA---AGG-CA
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67554547  7 +  89017189 CA---AGA-CA
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74329490  7 +  97876770 CA---AGG-CA
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             10566  7 +     98495 CA---AGG-CA
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4422460  7 -  28371801 CC---AGG-CA
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     89022  6 -    117718 -A---A-AATA
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               966793  7 +   8389877 CA---ATG-CT
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5018469  7 +   6462685 CA---ATG-CT
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3464373  7 -   3747815 CA---ATG-CT
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         9588  7 +     66751 CA---ATG-CT
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3968  7 -      8794 AA---AGA-CA
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            117138  7 +    362372 CA---AGA-CA
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               7521  7 +     48152 CA---AGG-GA
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4483195  7 -  14209539 CA---AAA-CA
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3949943  7 -   4490290 GA---AGG-CC
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 I 5
s Noctilio_leporinus.NocLep_scaffold_12062                  48220  7 +     94413 CA---AGT-CC
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_302224                             978  7 +      1516 CA---AGG-GA
i Nomascus_annamensis.k141_302224                       C 0 C 0
s Nomascus_concolor.k141_226614                               238  7 -      5092 CA---AGG-GA
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_642452                            1021  7 +      2851 CA---AGG-GA
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_a.k141_595747                                  1659  7 +      4512 CA---AGG-GA
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                29134  7 +   3668941 CA---AGG-CA
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65566122  7 -  95554990 TA---AGG-TA
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            2851  7 +      6470 TA---AGG-TA
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65668460  7 +  89412551 TA---AGG-TA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4995015  7 -  23139505 CA---AGG-TA
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3684562  7 +  10294119 ta---a-aatg
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             677840  7 -   3126709 CA---AAG-CA
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1078630  7 +   1425656 GA---AGG-CC
i Odocoileus_virginianus.KZ101650.1                     C 0 I 5
s Okapia_johnstoni.LVCL01S0017931.1                         35926  7 +     78940 GA---AGG-CC
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 I 5
s Ondatra_zibethicus.OndZib_scaffold_6821                  124033  7 +    145789 CA---AGA-AC
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  35804  7 +     62360 CA---AGG-CA
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7223627  7 -   7562323 GA---AGG-CC
i Orcinus_orca.KB316965.1                               C 0 I 5
s Orycteropus_afer.OryAfe_flattened_line_13509              43350  6 -     66828 -A---AGG-CA
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141874954  7 + 163896628 ca---agg-ta
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      306419  7 -    505867 CA---AGG-CA
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       38020  7 +     38679 TA---AGG-GA
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18007448  7 -  38779656 TA---AGG-GA
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134076192  7 - 275406953 GA---AGG-CC
i Ovis_aries.CM001582.2                                 C 0 I 5
s Ovis_canadensis.OviCan_scaffold_6251                      77406  7 +    140051 GA---AGG-CC
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 I 5
s Pan_paniscus.CM003386.1                               127573669  7 - 205426864 GA---AGG-GA
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.KZ622857.1                               326651  7 +    772158 CA---AGG-GA
i Pan_troglodytes.KZ622857.1                            I 87 I 44
s Panthera_onca.PanOnc_flattened_line_1615                  32655  7 +    295523 CA---AGT-CA
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3636389  7 +  18214204 CA---AGT-CA
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5026036  7 -   6340057 CA---AGT-CA
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1065053  7 -   1292953 GA---AGG-CC
i Pantholops_hodgsonii.KE114631.1                       C 0 I 5
s Papio_anubis.CM001492.2                               188155257  7 - 188283584 CA---AGG-GA
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             3574  7 +      5367 CA---AGG-GA
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47512645  7 +  47705337 CA---AGG-GA
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 66623  7 -    104429 CA---AGG-GA
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    5155  7 +     14967 CA---AGG-GA
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 1016  7 -      7628 CA---AGG-GA
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113972  7 -    135482 CA---AGT-TA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           4434  7 -     23713 TA---AGG-AA
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            23743  7 -     27972 TA---AGG-GA
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      42595  7 -     45160 CA---AGG-AA
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4948993  7 -   8017169 CA---AAG-TG
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    11497  7 -     36578 CA---A-AATG
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            120244  7 -    122454 GA---AGG-CC
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 I 5
s Piliocolobus_badius.k141_1987485                           1043  7 -      5908 CA---AGG-GA
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       1663  7 -     17985 CA---AGG-GG
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            1030  7 +      7694 CA---AGG-GG
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26739508  7 +  26888534 CA---AGG-GA
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            96162  4 +    112873 ------TG-CT
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             42640  7 -     61926 CA---AGG-GA
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        24071  7 +     78826 CA---AGG-GA
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              8020  7 -     15800 CA---AGG-GA
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        11218  7 -     16101 CA---AGG-GA
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          4527  7 +      9673 CA---AGG-GA
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13473523  7 -  19735023 CA---AGG-GA
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           12429  7 -     31692 CA---AGG-GA
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           4312  7 +     21690 GA---AGG-CC
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 I 5
s Plecturocebus_bernhardi.k141_959214                       21864  7 +     44506 CA---AGG-GA
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        22076  7 +     67491 CA---AGG-GA
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      12315  7 -     98129 CA---AGG-GA
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     21915  7 +    147771 CA---AGG-GA
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        22170  7 -     23762 CA---AGG-GA
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          2636  7 -     55515 CA---AGG-GA
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         21989  7 +    152463 CA---AGG-GA
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      8749  7 +      8943 CA---AGG-GA
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                         11711  7 +    134592 CA---AGG-GA
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          22299  7 -     75465 CA---AGG-GA
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              186194  7 -    373494 CA---AGG-GA
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19806842  7 +  19899266 CA---AGG-GA
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               4765  7 -     15069 CA---AGG-GA
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              4899  7 +     14865 CA---AGG-GA
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                76369  7 +     78963 CA---AGA-CA
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6847558  6 +  12164890 CA---AGG-G-
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    666777  6 -   2312742 CA---AGG-G-
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         2604  6 +     11805 CA---AGG-G-
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           41940  6 +     52369 CA---AGG-G-
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         34330  6 -     44753 CA---AGG-G-
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            16250  6 +     27322 CA---AGG-G-
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       15886  6 -     53241 CA---AGG-G-
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         38158  6 -     48185 CA---AGG-G-
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           32941  7 +     77221 CA---AGG-CA
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            2784  7 -     27784 CA---AGG-CA
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        244554 10 -    344369 TTTGGAGG-CA
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13244904  7 -  17261082 ca---agg-ca
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             602854  7 -   3946241 ca---agg-ca
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131532619  7 - 161321710 CA---AGT-CA
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             28883  7 +     56732 CA---AGG-GA
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6805374  7 +   6970761 CA---AGG-GA
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             4768  7 +     18040 CA---AGG-GA
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                14707  7 +     68503 GA---AGG-CC
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 I 5
s Rattus_norvegicus.chr11                                13914316  7 +  90463843 CA---AGG-CA
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1786714  7 +   2252614 TA---AGG-CA
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_1391695                            996  7 -      1866 CA---AGG-GA
i Rhinopithecus_bieti.k119_1391695                      C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206376653  7 - 206558726 CA---AGG-GA
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44855553  7 -  45163003 CA---AGG-GA
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                18194  7 +    109198 CA---AGG-CA
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       6509  7 +     12214 GA---ACA-TC
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 I 5
s Saimiri_boliviensis.NW_024100938.1                     15671727  7 -  43202129 CA---GGG-GA
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        3644  7 +     34089 CA---GGG-GA
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              3585  7 -     60842 CA---GGG-GA
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              3680  7 +     67014 CA---GGG-GA
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              3658  7 +     60816 CA---GGG-GA
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 3595  7 -     76454 CA---GGG-GA
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17340321  7 -  30362882 CA---AGG-GA
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         19680  7 -     62485 CA---AGG-GA
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   30277  7 -    114521 TA---AGG-CA
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        2380  7 +     15331 CA---AGG-GA
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       7777  7 +     20762 CA---AGG-GA
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         117775  7 +    130994 CA---AGG-GA
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           36566  7 +     46263 CA---AGG-GA
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     29680  7 +     42640 CA---AGG-GA
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        12724  7 +     30600 CA---AGG-GA
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   98576  7 -    120886 CA---AAG-CA
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            16897  7 +    739146 TA---AGT-CA
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17749526  2 -  27805282 TA---------
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2238771  7 +   2842873 CA---AGG-CA
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             233305  7 -    276980 GA---AGG-CA
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            25858  7 +     62062 CA---AAG-CA
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189270779  7 + 218635234 AA---Agg-cc
i Sus_scrofa.CM000824.4                                 C 0 I 5
s Symphalangus_syndactylus.tarseq_24                        13938  7 -  13920577 CA---AGG-GA
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               4949  6 -      6213 C----ATG-CT
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               13643  7 +     45698 AA---AGA-CA
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      805646  7 +   1148477 CG---AGG-CA
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  56303  7 +     99546 CG---AGG-CA
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               25464  7 +     42269 CA---AGG-GA
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               58780  7 +     65473 CA---AGG-GA
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194006784  7 - 194193292 CA---AGG-GA
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             38292  7 -     47444 CA---A-AATG
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  4506  7 +      6782 CA---AGG-TG
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  134794  7 -    259118 CC---AGG-CA
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        25887  7 +     38948 CA---AGG-GA
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   19614  7 -     32910 CA---AGG-GA
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      1001  7 -     12939 CA---AGG-GA
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                        936  7 -     14244 CA---AGG-GA
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           42334  7 -     54611 CA---AGG-GA
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                         140  7 -     11566 CA---AGG-GA
i Trachypithecus_germaini.k141_868450                   N 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     2312  7 -     15592 CA---AGG-GA
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                           969  7 +     14371 CA---AGG-GA
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  50721  7 +     51589 CA---AGG-GA
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       13902  7 +     14732 CA---AGG-GA
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       4374  7 -     28054 CA---AGG-GA
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44659174  7 -  44834318 CA---AGG-GA
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       1477  7 +     13828 CA---AGG-GA
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   4088  7 +     90398 GA---AGG-CC
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 I 5
s Trichechus_manatus.JH594618.1                          16081494  7 +  31416278 ca---tgg-ca
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69312344  7 -  96451834 GA---AGG-CC
i Tursiops_truncatus.MRVK01000923.1                     C 0 I 5
s Uropsilus_gracilis.UroGra_scaffold_139357                   804  7 +      2103 GA---AGG-CA
i Uropsilus_gracilis.UroGra_scaffold_139357             C 0 C 0
s Ursus_maritimus.KK498671.1                              6513099  7 +  28682327 CA---AGG-CA
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  4262  6 -     20643 CA---AGG-G-
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             23803  6 -     33872 CA---AGG-G-
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1523582  7 -   2331223 AA---AGG-CC
i Vicugna_pacos.KN269600.1                              C 0 I 5
s Vulpes_lagopus.VulLag_flattened_line_2045                136503  7 -    281493 CA---AGG-CA
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       125874  7 -    134049 CA---AGG-CA
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        212575  7 -    227762 CA---AAG-CA
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           5841  7 -      8775 GA---AGG-CC
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 I 5
e Dinomys_branickii.DinBra_scaffold_1996                   156356 54 +    228994 I
e Manis_pentadactyla.KN017078.1                             35015 87 +     58827 I
e Manis_javanica.JSZB01003966.1                            144940 87 +    252755 I
e Elephantulus_edwardii.JH947210.1                        7804622 10712 +  15467074 I
e Echinops_telfairi.JH980316.1                           22994174  0 -  44670279 C
e Zapus_hudsonius.ZapHud_scaffold_64392                     14107 296 -     20485 I
e Hylobates_pileatus_a.tarseq_592                             33311  5 -     60944 I
e Tupaia_tana.TupTan_flattened_line_68454                    4046  0 +     13056 C
e Tupaia_chinensis.KB320831.1                             2791778  0 -   3938065 C
e Nomascus_siki_b.tarseq_80                             24175  0 -  18771707 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               10931 3 +    209709 T-AT
s Acinonyx_jubatus.LLWD01000356.1                         2032285 3 +   3721120 C-CT
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    111284 3 -    189883 G-GT
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10655630 3 +  23371972 T-CT
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7092557 3 -  16596857 C-AT
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   11953 3 -     22067 C-AT
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                    290 3 -     60446 C-AT
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         1009 3 -     29318 C-AT
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_21674                           1226 3 -      1421 C-AT
i Allochrocebus_preussi.k141_21674                      C 0 C 0
s Allochrocebus_solatus.k141_371672                           903 3 -     80423 C-AT
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             9196 3 -     18050 C-AT
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                 10286 3 -     11521 C-AT
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              9873 3 -     21359 C-AT
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_298055                                 1169 3 +      1823 T-AT
i Alouatta_juara.k141_298055                            C 0 C 0
s Alouatta_macconnelli.k141_1331706                          9169 3 -     10438 C-AT
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            5825 3 +      7047 C-AT
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             9105 3 +     10410 C-AT
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            2915 3 -      4927 T-AT
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_1676232                           25991 3 -     26576 C-AT
i Alouatta_seniculus.k141_1676232                       I 69 C 0
s Ammotragus_lervia.NIVO01013474.1                        3519062 3 +   4113121 C-TT
i Ammotragus_lervia.NIVO01013474.1                      I 5 I 6
s Anoura_caudifer.AnoCau_scaffold_422                      389231 4 -    631301 CCCT
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 I 6
s Antilocapra_americana.AntAmePen_scaffold_42841            29644 4 +     33004 CATT
i Antilocapra_americana.AntAmePen_scaffold_42841        I 5 I 6
s Aotus_azarae.k141_3170768                                 61555 3 +     78111 C-AT
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            4496 3 +     22701 C-AT
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5748453 3 +   9889416 C-AT
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             5038 3 -    104377 C-AT
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               5044 3 +     23246 C-AT
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     2707 3 +      5067 C-AT
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      17226 3 +     17483 C-AT
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 7633 4 -     29036 CCCT
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 I 6
s Ateles_geoffroyi_b.tarseq_2582                             9538301 3 +  39197703 C-AT
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             59572 3 +     85812 C-AT
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                10584 3 +     89302 C-AT
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             15089 3 -     58268 C-AT
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             63080 3 +    119057 C-AT
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               5049 3 -     25888 C-AT
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 5681 3 -     16375 C-AT
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              2001 3 +      2719 C-AT
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26379075 3 +  51448160 C-TT
i Balaenoptera_acutorostrata.KI537095.1                 I 5 I 6
s Balaenoptera_bonaerensis.DF502048.1                        4307 3 -     13118 C-TT
i Balaenoptera_bonaerensis.DF502048.1                   I 5 I 6
s Beatragus_hunteri.BeaHun_scaffold_21644                   42125 3 -     72089 C-TT
i Beatragus_hunteri.BeaHun_scaffold_21644               I 5 I 6
s Bison_bison.KN264915.1                                  6558436 3 +   6870073 C-TT
i Bison_bison.KN264915.1                                I 4 I 6
s Bos_indicus.CM003021.1                                138138662 3 - 161108492 C-TT
i Bos_indicus.CM003021.1                                I 4 I 6
s Bos_mutus.JH883513.1                                     571049 3 -    998990 C-TT
i Bos_mutus.JH883513.1                                  I 4 I 6
s Bos_taurus.CM000177.6                                 136294395 3 - 158972876 C-TT
i Bos_taurus.CM000177.6                                 I 4 I 6
s Bubalus_bubalis.KI419065.1                              1230162 3 -   1914593 C-TT
i Bubalus_bubalis.KI419065.1                            I 4 I 6
s Cacajao_ayresi.k141_724503                               112942 3 -    171031 C-AT
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 11970 3 +    125063 C-AT
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                14015 3 -    216513 C-AT
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        6555 3 -    134917 C-AT
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3218487 3 -   8989139 C-TC
i Camelus_bactrianus.KN276303.1                         I 5 I 6
s Camelus_dromedarius.KN271192.1                           396192 3 -  15254737 C-TT
i Camelus_dromedarius.KN271192.1                        I 5 I 6
s Camelus_ferus.KB016973.1                                2971925 3 +   6889770 C-TC
i Camelus_ferus.KB016973.1                              I 5 I 6
s CanFam4.chr31                                          11517456 3 +  39901454 C-AT
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   12481 3 +     87036 C-AT
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11264121 3 -  35597290 C-AT
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11086653 3 +  39895921 C-AT
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16453672 3 -  44759192 C-AT
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21324138 3 + 157394656 C-TT
i Capra_aegagrus.CM003214.1                             I 5 I 6
s Capra_hircus.CM004562.1                               135705365 3 - 157403528 C-TT
i Capra_hircus.CM004562.1                               I 5 I 6
s Capromys_pilorides.CapPil_scaffold_979108                   963 3 -      1248 C-AT
i Capromys_pilorides.CapPil_scaffold_979108             C 0 I 16
s Carlito_syrichta.NW_007248099.1                          307987 3 +    345090 C-AT
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               58432 4 +     67245 CCCT
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 I 6
s Castor_canadensis.CasCan_scaffold_47037                   29653 3 +     33760 C-AT
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   157701 3 -    276539 C-TT
i Catagonus_wagneri.CatWag_scaffold_1305                I 5 I 6
s Cavia_aperea.AVPZ01000278.1                            15785599 3 -  24422027 N-NN
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15797533 3 -  24440124 T-AT
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       175724 3 +    436027 T-AT
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18889785 3 -  29618158 C-AT
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 7329 3 -     26817 C-AT
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                11569 3 +     25043 C-AT
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         7020 3 +     21754 C-AT
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4362797 3 +   7569818 C-CT
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         2549 3 -      9338 C-CT
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6554225 3 +   6739814 C-AT
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      25702 3 +     60454 C-AT
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                           907 3 -     21101 C-AT
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         58217 3 -    107033 C-AT
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        1109 3 -     17608 C-AT
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          28604 3 +     30494 C-AT
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          57450 3 -     59240 C-AT
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          1151 3 +     16677 C-AT
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           23309 3 +     35983 C-AT
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11989837 3 +  12117833 C-AT
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46476595 3 +  46592721 C-AT
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      40146 3 -     45581 C-AT
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       1152 3 +     35577 C-AT
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                         928 3 -     25661 C-AT
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                         906 3 -     17744 C-AT
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        20515 3 +     37128 C-AT
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           1745 3 -      6963 C-CC
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 I 7
s Cheirogaleus_major.k141_1157592                           57978 3 -     68416 C-AT
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            7021 3 +     13308 C-AT
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             4585 3 -     18223 C-AT
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             21608 3 +     25473 C-AT
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           40643 3 +     57117 C-AT
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          45322 3 +     54541 C-AT
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15960740 3 +  43084221 t-at
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         70144 3 +    196370 C-AT
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          14324 3 +     40510 C-AT
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15138068 3 -  15256731 C-AT
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      33115 3 -     53260 C-AT
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101143679 3 + 101219884 C-AT
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                15412 3 -     21363 A-CT
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 I 2
s Choloepus_hoffmanni.KN194586.1                           760720 3 +    964067 A-CT
i Choloepus_hoffmanni.KN194586.1                        C 0 I 2
s Colobus_angolensis.KN985967.1                          10885445 3 +  10971483 C-AT
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147663609 3 + 156195979 C-AT
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            15594 3 +     23629 C-AT
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60611541 3 +  78930452 C-TT
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         38535 4 -     40477 TTTT
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 277251 3 -    399297 G-GT
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53027936 3 +  72327488 G-TT
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            50300 3 -     70449 C-CT
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  207153 3 -    956709 C-AT
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 29728 3 -     67205 T-AT
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                16751 3 +     26546 T-AT
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             57843 3 -    236241 T-AT
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          182577 3 -   6883506 C-CT
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16843829 3 +  31942871 C-AT
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80035754 3 -  96802777 C-TT
i Delphinapterus_leucas.KZ290064.1                      I 5 I 6
s Desmodus_rotundus.KZ672188.1                           18697741 4 -  18957592 CACT
i Desmodus_rotundus.KZ672188.1                          C 0 I 6
s Dicerorhinus_sumatrensis.PEKH010003161.1                 321444 3 +    993696 C-CT
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   2096 3 +    151128 C-CT
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dipodomys_ordii.KN672545.1                              3655137 3 +   4240102 C-AT
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 26770 3 +     28912 T-AT
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                35090 3 -     73477 T-AT
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Eidolon_helvum.KE772537.1                                 11110 4 +     24177 CCTT
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1490412 3 +   1727528 C-TT
i Elaphurus_davidianus.JRFZ01086400.1                   I 5 I 6
s Ellobius_lutescens.LOEQ01003611.1                        238494 3 -    369425 G-AC
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           5604 3 -      7838 G-AT
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85870082 3 +  99434291 A-CT
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4703135 4 +   6522550 CCTT
i Eptesicus_fuscus.JH977687.1                           C 0 I 1
s Equus_asinus.JREZ01000062.1                             5851862 3 -   7175178 C-CT
i Equus_asinus.JREZ01000062.1                           C 0 I 1
s Equus_caballus.CM000402.2                              13350365 3 +  41866177 C-CT
i Equus_caballus.CM000402.2                             C 0 I 1
s Equus_przewalskii.ATBW01073585.1                          11855 3 +     92910 C-CT
i Equus_przewalskii.ATBW01073585.1                      C 0 I 1
s Erinaceus_europaeus.JH835290.1                         11531408 3 +  16010500 A-TT
i Erinaceus_europaeus.JH835290.1                        C 0 I 4
s Erythrocebus_patas.Contig8                             48770246 3 -  48907691 C-AT
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          313960 3 +    330699 C-TT
i Eschrichtius_robustus.EscRob_flattened_line_685       I 5 I 6
s Eubalaena_japonica.EubJap_flattened_line_7756             60414 3 +     89355 C-TT
i Eubalaena_japonica.EubJap_flattened_line_7756         I 5 I 6
s Eulemur_albifrons.k141_715837                              4022 3 +     13586 C-AT
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               3959 3 -      6809 C-AT
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            10432 3 +     36558 C-AT
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             6751 3 +     60246 C-AT
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                10230 3 +    109717 C-AT
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               14613 3 +     16540 C-AT
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                14886 3 +     27497 C-AT
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           17343 3 +     26808 C-AT
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                32078 3 +     46535 C-AT
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              14800 3 -     29447 C-AT
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129891261 3 - 159252932 C-CT
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129278333 3 - 158578461 C-CT
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 19468 3 +     52776 C-CT
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13891696 3 -  19261668 T-AT
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     209931 3 -    847004 T-AT
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           12310 3 -     43889 T-AT
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           9378 3 +     27357 C-AT
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               155247 3 +    324696 C-AT
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    180212 3 -    189561 C-TT
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 5 I 6
s Glis_glis.GliGli_scaffold_79770                           11862 3 -     18683 C-AT
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               4316 3 -     14630 C-AT
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119651415 3 - 195582420 C-AT
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   76592 3 +    118900 C-AT
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                          823 3 +     10286 C-AT
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_1254239                            8999 3 +      9690 C-AT
i Hapalemur_gilberti.k141_1254239                       C 0 C 0
s Hapalemur_griseus.k141_1387522                             4628 3 +     56096 C-AT
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        27878 3 -     42470 C-AT
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        44502 3 -     54384 C-AT
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              15508 3 +     53719 C-CT
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                26410 3 -     91191 C-TT
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 5 I 6
s Heterocephalus_glaber.JH602058.1                        2550072 3 +  31725842 T-AT
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               56512 3 +     73687 A-CT
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              146035 3 +    277961 C-TT
i Hippopotamus_amphibius.HipAmp_scaffold_1308           I 5 I 6
s Hipposideros_armiger.JXIK01001085.1                      277315 4 -    477199 CCTT
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              6474 4 -      9143 CCTT
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      3717 3 -   7690867 T-AT
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 14602 3 -     67322 C-CT
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           17969 3 -    119109 T-AT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              4143 3 +      5897 T-AT
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_624065                               1007 3 +      2112 T-AT
i Hylobates_agilis.k141_624065                          C 0 C 0
s Hylobates_klossii.k141_466549                             10583 3 +     11537 T-AT
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14623688 3 -  25970782 T-AT
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                             944 3 -      2977 T-AT
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     5145 3 +     22540 T-AT
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7124858 3 +  13083262 C-AT
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_4418183                                    442 3 -      1457 C-AT
i Indri_indri.k141_4418183                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               7954 3 +     17520 C-TT
i Inia_geoffrensis.IniGeo_flattened_line_66725          I 219 I 6
s Jaculus_jaculus.JH725517.1                              8564684 3 +  11848649 T-AT
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               22574 3 +     37189 C-TT
i Kogia_breviceps.KogBre_flattened_line_35920           I 5 I 6
s Lagothrix_lagothricha.k141_12968                          49165 3 -    147782 T-AT
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   112982 4 -    115756 CCTT
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258406183 3 - 285822530 C-AT
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        22946 3 +     39228 C-AT
i Lepilemur_ankaranensis.k141_884009                    C 0 I 3
s Lepilemur_dorsalis.k141_134267                            52321 3 +     63517 C-AT
i Lepilemur_dorsalis.k141_134267                        C 0 I 3
s Lepilemur_ruficaudatus.k141_617879                        77571 3 +    116806 C-AT
i Lepilemur_ruficaudatus.k141_617879                    C 0 I 3
s Lepilemur_septentrionalis.k141_578524                     30585 3 -     33031 C-AT
i Lepilemur_septentrionalis.k141_578524                 C 0 I 3
s Leptonychotes_weddellii.KB714749.1                      3084302 3 -   3498232 C-CT
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    11937 3 +     22452 C-AT
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            134907 3 +   3060487 C-TT
i Lipotes_vexillifer.KE558548.1                         I 5 I 6
s Lophocebus_aterrimus.ctg55                             19247314 3 +  19376315 C-AT
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            9695 3 +     84689 C-AT
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3777444 3 +   6799190 C-AT
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20591039 3 -  62548349 C-CT
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11086109 3 +  39895028 C-AT
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             19054 3 +     74745 C-AT
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12705510 3 +  12821369 C-AT
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                1155 3 -      3136 C-AT
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           45972 3 +     63263 C-AT
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                  675 3 -      2568 C-AT
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 1261 3 -      7381 C-AT
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  44479 3 -     79256 C-AT
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196034587 3 + 196197964 C-AT
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11444754 3 +  11645122 C-AT
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   3426 3 -     46448 C-AT
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                1098 3 -     13212 C-AT
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 14778 3 -     55006 C-AT
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43839896 3 +  43892939 C-AT
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               16065 3 -     24607 C-AT
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               3431 3 -     27140 C-AT
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                700524 4 +    802869 CCTT
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43436473 3 -  43563597 C-AT
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4449299 3 -   4543643 C-AT
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36872697 3 +  64221397 C-AT
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       63322 4 -    234502 CCTC
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 I 4
s Mellivora_capensis.MelCap_flattened_line_146202             895 3 -      1999 A-CT
i Mellivora_capensis.MelCap_flattened_line_146202       C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               11410 3 +     15977 G-TT
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1045674 3 -  26018355 G-TT
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Microcebus_murinus.CM007691.1                          16509188 3 +  47401472 C-AT
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  30616 3 -     48017 T-GT
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               21617 4 -     32043 CCCT
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 I 6
s Microtus_ochrogaster.CM001673.1                        22818784 3 -  98408828 A-AT
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8208608 4 +  10048721 CGTT
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            33264 4 +     45743 CCCT
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         1026 3 +     29742 C-AT
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         9810 3 -    104932 C-CT
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     4578 3 +      8497 C-AT
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 145342 3 +    154973 C-TT
i Monodon_monoceros.MonMon_M_scaffold_5598              I 5 I 6
s Mormoops_blainvillei.MorMeg_scaffold_2952                160125 3 +    265003 C-TT
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 3513 3 -      4346 C-TT
i Moschus_moschiferus.MosMos_scaffold_146101            I 5 I 6
s Mungos_mungo.MunMun_flattened_line_8729                  143199 3 -    168139 T-CT
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          18498 4 -    100666 CCTT
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70765281 3 +  92629107 G-AG
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75488318 3 +  98207768 G-AG
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67554554 3 +  89017189 G-AT
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74329497 3 +  97876770 G-AG
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             10573 3 +     98495 C-AT
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4422467 3 -  28371801 A-TG
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     89028 3 -    117718 C-AT
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               966800 4 +   8389877 TCTT
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5018476 4 +   6462685 TCTT
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3464380 4 -   3747815 TCTT
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         9595 4 +     66751 TCTT
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3975 3 -      8794 C-CC
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            117145 3 +    362372 G-TT
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               7528 3 +     48152 C-AT
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4483202 3 -  14209539 C-CT
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3949955 3 -   4490290 C-TT
i Neophocaena_asiaeorientalis.KZ688543.1                I 5 I 6
s Noctilio_leporinus.NocLep_scaffold_12062                  48227 4 +     94413 TCTT
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_302224                             985 3 +      1516 T-AT
i Nomascus_annamensis.k141_302224                       C 0 I 19
s Nomascus_concolor.k141_226614                               245 3 -      5092 T-AT
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_642452                            1028 3 +      2851 T-AT
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_a.k141_595747                                  1666 3 +      4512 T-AT
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                29141 3 +   3668941 C-AT
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 I 9
s Nycticebus_bengalensis.LG16                            65566129 3 -  95554990 C-AT
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            2858 3 +      6470 C-AT
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65668467 3 +  89412551 C-AT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4995022 3 -  23139505 T-GT
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3684569 3 +  10294119 t-at
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             677847 3 -   3126709 C-CT
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1078642 3 +   1425656 C-TT
i Odocoileus_virginianus.KZ101650.1                     I 5 I 6
s Okapia_johnstoni.LVCL01S0017931.1                         35938 3 +     78940 C-TG
i Okapia_johnstoni.LVCL01S0017931.1                     I 5 I 6
s Ondatra_zibethicus.OndZib_scaffold_6821                  124040 3 +    145789 G-AT
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  35811 3 +     62360 G-GT
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7223639 3 -   7562323 C-TT
i Orcinus_orca.KB316965.1                               I 5 I 6
s Orycteropus_afer.OryAfe_flattened_line_13509              43356 3 -     66828 G-TT
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141874961 3 + 163896628 c-at
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      306426 3 -    505867 C-AT
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       38027 3 +     38679 T-AT
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18007455 3 -  38779656 T-AT
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134076204 3 - 275406953 C-TT
i Ovis_aries.CM001582.2                                 I 5 I 6
s Ovis_canadensis.OviCan_scaffold_6251                      77418 3 +    140051 C-TT
i Ovis_canadensis.OviCan_scaffold_6251                  I 5 I 6
s Pan_paniscus.CM003386.1                               127573676 3 - 205426864 C-AT
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120150829 3 - 196562556 C-AT
i Pan_troglodytes.CM009241.2                            I 7 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  32662 3 +    295523 C-CT
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3636396 3 +  18214204 C-CT
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5026043 3 -   6340057 C-CT
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1065065 3 -   1292953 C-TT
i Pantholops_hodgsonii.KE114631.1                       I 5 I 6
s Papio_anubis.CM001492.2                               188155264 3 - 188283584 C-AT
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             3581 3 +      5367 C-AT
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47512652 3 +  47705337 C-AT
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 66630 3 -    104429 C-AT
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    5162 3 +     14967 C-AT
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 1023 3 -      7628 C-AT
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113979 3 -    135482 C-CT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           4441 3 -     23713 C-AT
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            23750 3 -     27972 C-AT
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      42602 3 -     45160 C-AT
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4949000 3 -   8017169 G-GT
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    11504 3 -     36578 T-AT
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            120256 3 -    122454 C-TT
i Phocoena_phocoena.PhoPho_flattened_line_11948         I 5 I 6
s Piliocolobus_badius.k141_1987485                           1050 3 -      5908 C-AT
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       1670 3 -     17985 C-AT
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            1037 3 +      7694 C-AT
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26739515 3 +  26888534 C-AT
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            96166 4 +    112873 CCTT
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 I 256
s Pithecia_albicans.k141_991845                             42647 3 -     61926 C-AT
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        24078 3 +     78826 C-AT
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              8027 3 -     15800 C-AT
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        11225 3 -     16101 C-AT
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          4534 3 +      9673 C-AT
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13473530 3 -  19735023 C-AT
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           12436 3 -     31692 C-AT
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           4324 3 +     21690 C-TT
i Platanista_gangetica.PlaMin_flattened_line_72990      I 5 I 6
s Plecturocebus_bernhardi.k141_959214                       21871 3 +     44506 T-AT
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        22083 3 +     67491 T-AT
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      12322 3 -     98129 T-AT
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     21922 3 +    147771 T-AT
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        22177 3 -     23762 T-AT
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          2643 3 -     55515 T-AT
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         21996 3 +    152463 T-AT
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      8756 3 +      8943 T-AT
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                         11718 3 +    134592 T-AT
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          22306 3 -     75465 T-AT
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              186201 3 -    373494 C-AT
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19806849 3 +  19899266 C-AT
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               4772 3 -     15069 C-AT
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              4906 3 +     14865 C-AT
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                76376 3 +     78963 A-CT
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6847564 3 +  12164890 C-AT
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    666783 3 -   2312742 C-AT
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         2610 3 +     11805 C-AT
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           41946 3 +     52369 C-AT
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         34336 3 -     44753 C-AT
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            16256 3 +     27322 C-AT
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       15892 3 -     53241 C-AT
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         38164 3 -     48185 C-AT
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           32948 3 +     77221 G-TT
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            2791 4 -     27784 CCTT
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        244564 3 -    344369 A-CT
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13244911 4 -  17261082 cctt
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             602861 4 -   3946241 cctt
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131532626 3 - 161321710 C-CT
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             28890 3 +     56732 C-AT
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6805381 3 +   6970761 C-AG
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             4775 3 +     18040 C-AT
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                14719 3 +     68503 C-TT
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 5 I 6
s Rattus_norvegicus.chr11                                13914323 3 +  90463843 G-AT
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1786721 4 +   2252614 TCTT
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_1391695                           1003 3 -      1866 C-AT
i Rhinopithecus_bieti.k119_1391695                      C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206376660 3 - 206558726 C-AT
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44855560 3 -  45163003 C-AT
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                18201 4 +    109198 CCTT
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       6521 3 +     12214 C-TT
i Saiga_tatarica.SaiTat_scaffold_82192                  I 5 I 6
s Saimiri_boliviensis.NW_024100938.1                     15671734 3 -  43202129 C-AT
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        3651 3 +     34089 C-AT
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              3592 3 -     60842 C-AT
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              3687 3 +     67014 C-AT
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              3665 3 +     60816 C-AT
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 3602 3 -     76454 C-AT
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17340328 3 -  30362882 C-AT
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         19687 3 -     62485 C-AT
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   30284 3 -    114521 C-CT
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        2387 3 +     15331 C-AT
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       7784 3 +     20762 C-AT
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         117782 3 +    130994 C-AT
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           36573 3 +     46263 C-AT
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     29687 3 +     42640 C-AT
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        12731 3 +     30600 C-AT
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   98583 3 -    120886 G-TT
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            16904 3 +    739146 C-TT
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2238778 3 +   2842873 C-AT
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             233312 3 -    276980 C-CT
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            25865 3 +     62062 C-CT
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189270791 3 + 218635234 c-tt
i Sus_scrofa.CM000824.4                                 I 5 I 6
s Symphalangus_syndactylus.tarseq_24                        13945 3 -  13920577 T-AT
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               4955 4 -      6213 CCTT
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               13650 3 +     45698 C-CC
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      805653 3 +   1148477 C-CT
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  56310 3 +     99546 C-CT
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               25471 3 +     42269 C-AT
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               58787 3 +     65473 C-AT
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194006791 3 - 194193292 C-AT
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             38299 3 -     47444 T-AT
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  4513 3 +      6782 C-CT
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  134801 4 -    259118 CTCT
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 I 6
s Trachypithecus_auratus.k141_738098                        25894 3 +     38948 C-AT
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   19621 3 -     32910 C-AT
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      1008 3 -     12939 C-AT
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                        943 3 -     14244 C-AT
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           42341 3 -     54611 C-AT
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                         147 3 -     11566 C-AT
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     2319 3 -     15592 C-AT
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                           976 3 +     14371 C-AT
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  50728 3 +     51589 C-AT
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       13909 3 +     14732 C-AT
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       4381 3 -     28054 C-AT
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44659181 3 -  44834318 C-AT
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       1484 3 +     13828 C-AT
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   4100 3 +     90398 C-TT
i Tragulus_javanicus.TraJav_scaffold_14717              I 5 I 6
s Trichechus_manatus.JH594618.1                          16081501 3 +  31416278 c-ct
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69312356 3 -  96451834 C-TT
i Tursiops_truncatus.MRVK01000923.1                     I 5 I 6
s Uropsilus_gracilis.UroGra_scaffold_139357                   811 3 +      2103 C-CA
i Uropsilus_gracilis.UroGra_scaffold_139357             C 0 I 5
s Ursus_maritimus.KK498671.1                              6513106 3 +  28682327 T-CT
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  4268 3 -     20643 C-AT
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             23809 3 -     33872 C-AT
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1523594 3 -   2331223 C-TT
i Vicugna_pacos.KN269600.1                              I 5 I 6
s Vulpes_lagopus.VulLag_flattened_line_2045                136510 3 -    281493 C-AT
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       125881 3 -    134049 C-AT
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        212582 3 -    227762 C-CT
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           5853 3 -      8775 C-TT
i Ziphius_cavirostris.ZipCav_flattened_line_127025      I 5 I 6
e Sorex_araneus.JH798170.1                               17749528 0 -  27805282 C
e Dinomys_branickii.DinBra_scaffold_1996                   156356 54 +    228994 I
e Manis_pentadactyla.KN017078.1                             35015 87 +     58827 I
e Manis_javanica.JSZB01003966.1                            144940 87 +    252755 I
e Elephantulus_edwardii.JH947210.1                        7804622 10712 +  15467074 I
e Echinops_telfairi.JH980316.1                           22994174 0 -  44670279 C
e Crocidura_indochinensis.CroInd_scaffold_38409             18575 0 -     19186 C
e Zapus_hudsonius.ZapHud_scaffold_64392                     14107 296 -     20485 I
e Hylobates_pileatus_a.tarseq_592                             33311 5 -     60944 I
e Tupaia_tana.TupTan_flattened_line_68454                    4046 0 +     13056 C
e Tupaia_chinensis.KB320831.1                             2791778 0 -   3938065 C
e Nomascus_siki_b.tarseq_80                             24175 0 -  18771707 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               10934 19 +    209709 T-T-----TCCTG--GTCT--T----A-----------GC-T--AC-T
s Acinonyx_jubatus.LLWD01000356.1                         2032288 16 +   3721120 T-T-----TC-CC--AA----C----A-----------GT-T--CT-T
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    111287 20 -    189883 T-T-----CCTTG--AG----T----T--GT-C-----CC-T--CA-T
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10655633 16 +  23371972 T-T-----TC-CC--AA----T----G-----------GT-T--CT-T
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7092560 16 -  16596857 T-T-----TC-CC--GA----C----A-----------gt-t--ct-t
i Ailurus_fulgens.LNAC01000003.1                        C 0 I 222
s Allactaga_bullata.AllBul_scaffold_70162                   11956 17 -     22067 C-A-----CCAAG--GG----T----G-----------CA-G--CA-T
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                    293 19 -     60446 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         1012 19 -     29318 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_21674                           1229 19 -      1421 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Allochrocebus_preussi.k141_21674                      C 0 C 0
s Allochrocebus_solatus.k141_371672                           906 19 -     80423 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             9199 19 -     18050 T-T-----CCCTG--GTCT--T----A-----------GT-T--CC-T
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                 10289 19 -     11521 T-T-----CCCTG--GTCT--T----A-----------GT-T--CC-T
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              9876 19 -     21359 T-T-----CCCTG--GTCT--T----A-----------GT-T--CC-T
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_298055                                 1172 19 +      1823 T-T-----CCCTG--GTCT--T----A-----------CT-T--CC-T
i Alouatta_juara.k141_298055                            C 0 C 0
s Alouatta_macconnelli.k141_1331706                          9172 19 -     10438 T-T-----CCCTG--GTCT--T----A-----------GT-T--CC-T
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            5828 19 +      7047 T-T-----CCCTG--GTCT--T----A-----------GT-T--CC-T
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             9108 19 +     10410 T-T-----CCCTG--GTCT--T----A-----------GT-T--CC-T
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            2918 19 -      4927 T-T-----CCCTG--ATCT--T----A-----------GT-T--CC-T
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_1676232                           25994 19 -     26576 T-T-----CCCTG--GTCT--T----A-----------GT-T--CC-T
i Alouatta_seniculus.k141_1676232                       C 0 I 159
s Ammotragus_lervia.NIVO01013474.1                        3519071  6 +   4113121 --------------------------------------AT-T--CC-T
i Ammotragus_lervia.NIVO01013474.1                      I 6 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      389241  6 -    631301 --------------------------------------GT-T--AC-T
i Anoura_caudifer.AnoCau_scaffold_422                   I 6 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            29654  6 +     33004 --------------------------------------GT-T--CC-T
i Antilocapra_americana.AntAmePen_scaffold_42841        I 6 C 0
s Aotus_azarae.k141_3170768                                 61558 19 +     78111 T-T-----CCCTG--GTCT--T----A-----------GT-T--CC-T
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            4499 19 +     22701 T-T-----CCCTG--GTCT--T----A-----------GT-T--CC-T
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5748456 19 +   9889416 T-T-----CCCTA--GTCT--T----A-----------GT-T--CC-T
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             5041 19 -    104377 T-T-----CCCTG--GTCT--T----A-----------GT-T--CC-T
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               5047 19 +     23246 T-T-----CCCTG--GTCT--T----A-----------GT-T--CC-T
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     2710 17 +      5067 A-C-----CCTAG--AA----C----A-----------CA-T--CC-T
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      17229 18 +     17483 G-T-----CCCTA--AA---AG----A-----------GT-T--CC-T
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 7643  6 -     29036 --------------------------------------GT-T--AC-T
i Artibeus_jamaicensis.ArtJam_scaffold_41619            I 6 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9538304 19 +  39197703 T-T-----CCCTG--GTCT--T----A-----------GT-T--CC-C
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             59575 19 +     85812 T-T-----CCCTG--GTCT--T----A-----------GT-T--CC-C
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                10587 19 +     89302 T-T-----CCCTG--GTCT--T----A-----------GT-T--CC-C
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             15092 19 -     58268 T-T-----CCCTG--GTCT--T----A-----------GT-T--CC-C
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             63083 19 +    119057 T-T-----CCCTG--GTCT--T----A-----------GT-T--CC-C
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               5052 19 -     25888 T-T-----CCCTG--GTCT--T----A-----------GT-T--CC-C
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 5684 17 -     16375 T-T-----CCCTG--GA----T----G-----------GG-T--CC-T
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              2004 17 +      2719 T-T-----CCCTG--GA----T----G-----------GG-T--CC-T
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26379084  6 +  51448160 --------------------------------------GT-T--CC-T
i Balaenoptera_acutorostrata.KI537095.1                 I 6 C 0
s Balaenoptera_bonaerensis.DF502048.1                        4316  6 -     13118 --------------------------------------GT-T--CC-T
i Balaenoptera_bonaerensis.DF502048.1                   I 6 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   42134  6 -     72089 --------------------------------------AT-T--CC-T
i Beatragus_hunteri.BeaHun_scaffold_21644               I 6 C 0
s Bison_bison.KN264915.1                                  6558445  6 +   6870073 --------------------------------------GT-T--GC-T
i Bison_bison.KN264915.1                                I 6 C 0
s Bos_indicus.CM003021.1                                138138671  6 - 161108492 --------------------------------------GT-T--GC-T
i Bos_indicus.CM003021.1                                I 6 C 0
s Bos_mutus.JH883513.1                                     571058  6 -    998990 --------------------------------------GT-T--GC-T
i Bos_mutus.JH883513.1                                  I 6 C 0
s Bos_taurus.CM000177.6                                 136294404  6 - 158972876 --------------------------------------GT-T--GC-T
i Bos_taurus.CM000177.6                                 I 6 C 0
s Bubalus_bubalis.KI419065.1                              1230171  6 -   1914593 --------------------------------------GT-T--GC-T
i Bubalus_bubalis.KI419065.1                            I 6 C 0
s Cacajao_ayresi.k141_724503                               112945 19 -    171031 T-T-----CCCTG--GTCT--T----A-----------GT-T--CC-T
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 11973 19 +    125063 T-T-----CCCTG--GTCT--T----A-----------GT-T--CC-T
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                14018 19 -    216513 T-T-----CCCTG--GTCT--T----A-----------GT-T--CC-T
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        6558 19 -    134917 T-T-----CCCTG--GTCT--T----A-----------GT-T--CC-T
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3218496  6 -   8989139 --------------------------------------GT-T--CC-T
i Camelus_bactrianus.KN276303.1                         I 6 C 0
s Camelus_dromedarius.KN271192.1                           396201  6 -  15254737 --------------------------------------GT-T--CC-T
i Camelus_dromedarius.KN271192.1                        I 6 C 0
s Camelus_ferus.KB016973.1                                2971934  6 +   6889770 --------------------------------------GT-T--CC-T
i Camelus_ferus.KB016973.1                              I 6 C 0
s CanFam4.chr31                                          11517459 17 +  39901454 T-T-----TC-CCC-AA----C----A-----------AT-T--CT-T
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   12484 17 +     87036 T-T-----TC-CCC-AA----C----A-----------AT-T--CT-T
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11264124 17 -  35597290 T-T-----TC-CCC-AA----C----A-----------AT-T--CT-T
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11086656 17 +  39895921 T-T-----TC-CCC-AA----C----A-----------AT-T--CT-T
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16453675 17 -  44759192 T-T-----TC-CCC-AA----C----A-----------AT-T--CT-T
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21324147  6 + 157394656 --------------------------------------AT-T--CC-T
i Capra_aegagrus.CM003214.1                             I 6 C 0
s Capra_hircus.CM004562.1                               135705374  6 - 157403528 --------------------------------------AT-T--CC-T
i Capra_hircus.CM004562.1                               I 6 C 0
s Capromys_pilorides.CapPil_scaffold_933029                  1047 16 +      1311 T-T-----CTCAG---A----T----C-----------GA-T--TC-T
i Capromys_pilorides.CapPil_scaffold_933029             I 9 n 16
s Carlito_syrichta.NW_007248099.1                          307990 17 +    345090 T-T-----CCATG--GA----C----A-----------GT-T--CC-G
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               58442  6 +     67245 --------------------------------------GT-T--AC-T
i Carollia_perspicillata.CarPer_scaffold_4436           I 6 C 0
s Castor_canadensis.CasCan_scaffold_47037                   29656 18 +     33760 T-T-----CCCAG--GA----T----A-----------AA-T--ACAT
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   157710  6 -    276539 --------------------------------------AT-T--CC-C
i Catagonus_wagneri.CatWag_scaffold_1305                I 6 C 0
s Cavia_aperea.AVPZ01000278.1                            15785602 15 -  24422027 N-N-----NNNNN---N----N----N-----------NN-N--NN--
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15797536 15 -  24440124 T-T-----CCCAG---A----G----A-----------AA-T--CC--
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       175727 15 +    436027 T-T-----CCCAG---A----G----A-----------AA-T--CC--
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18889788 19 -  29618158 T-T-----CCCTG--GTCT--T----A-----------GT-T--CC-T
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 7332 19 -     26817 T-T-----CCCTG--GTCT--T----A-----------GT-T--CC-T
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                11572 19 +     25043 T-T-----CCCTG--GTCT--T----A-----------GT-T--CC-T
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         7023 17 +     21754 T-T-----CCATG--GA----T----A-----------GT-T--CT-G
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4362800 16 +   7569818 T-T-----CC-TG--GA----C----T-----------GT-T--CC-T
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         2552 16 -      9338 T-T-----CC-TG--GA----C----T-----------GT-T--CC-T
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6554228 19 +   6739814 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      25705 19 +     60454 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                           910 19 -     21101 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         58220 19 -    107033 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        1112 19 -     17608 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          28607 19 +     30494 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          57453 19 -     59240 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          1154 19 +     16677 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           23312 19 +     35983 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11989840 19 +  12117833 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46476598 19 +  46592721 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      40149 19 -     45581 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       1155 19 +     35577 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                         931 19 -     25661 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                         909 19 -     17744 T-T-----CCCTA--GTCT--T----A-----------GC-T--CC-T
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        20518 19 +     37128 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           1755  7 -      6963 --------------------------T-----------GT-T--TT-T
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      I 7 C 0
s Cheirogaleus_major.k141_1157592                           57981 17 -     68416 T-T-----CCCTG--GA----T----G-----------TT-T--CC-T
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            7024 17 +     13308 T-T-----CTCTG--GA----T----G-----------TT-T--CC-T
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             4588 19 -     18223 T-T-----CCCTG--GTCT--T----A-----------GT-T--CC-T
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             21611 19 +     25473 T-T-----CCCTG--GTCT--T----A-----------GT-T--CC-T
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           40646 19 +     57117 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          45325 19 +     54541 T-T-----CCCTG--GTCT--T----A-----------GT-T--CC-T
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15960743 16 +  43084221 t-t-----cccaG---A----T----A-----------TG-T--CT-T
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         70147 19 +    196370 T-T-----CCCTG--GTCT--T----A-----------GT-T--CC-T
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          14327 19 +     40510 T-T-----CCCTG--GTCT--T----A-----------GT-T--CC-T
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15138071 19 -  15256731 T-T-----CCCTG--GTCT--T----A-----------GC-A--CC-T
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      33118 19 -     53260 T-T-----CCCTG--GTCT--T----A-----------GC-A--CC-T
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101143682 19 + 101219884 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                15417 17 -     21363 T-T-----CCCTG--GA----C----A-----------GT-T--TC-T
i Choloepus_didactylus.ChoDid_scaffold_36182            I 2 C 0
s Choloepus_hoffmanni.KN194586.1                           760725 17 +    964067 T-T-----CCCTG--GA----C----A-----------GT-T--TC-T
i Choloepus_hoffmanni.KN194586.1                        I 2 C 0
s Colobus_angolensis.KN985967.1                          10885448 19 +  10971483 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147663612 19 + 156195979 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            15597 19 +     23629 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60611544 16 +  78930452 T-T-----CC-TG--GA----C----A-----------GT-T--GC-T
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         38539 15 -     40477 C-C-T-------C-AGA----C----A-----------GT-T--AC-T
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 277254 21 -    399297 T-T-----CCCAG--GG----T----G--GT-C-C---CC-T--CA-T
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53027939 20 +  72327488 T-T-----CTTAG--GG----C----A--GT-C-----CC-C--CA-T
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             18575 12 -     19186 -----------TA--GA----A----C-----------ATCC---T-T
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            50303 16 -     70449 T-T-----TC-CC--AA----T----A-----------GT-T--CT-T
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  207156 18 -    956709 TTT-----CCCAG--GA----T----A-----------GA-T--TC-T
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 29731 32 -     67205 T-TATTCACTAAG---A----T----GAAATACACTGAGA-C--TC-T
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                16754 16 +     26546 T-T-----CCCAG---A----T----A-----------GA-T--CC-T
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             57846 16 -    236241 T-T-----CCCAG---A----T----A-----------GA-T--AT-G
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          182580 17 -   6883506 T-T-----TCCTA--GA----C----A-----------GT-T--TC-T
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16843832 17 +  31942871 T-T-----CCCTG--GA----T----A-----------GT-T--TC-T
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80035763  6 -  96802777 --------------------------------------GT-T--CC-T
i Delphinapterus_leucas.KZ290064.1                      I 6 C 0
s Desmodus_rotundus.KZ672188.1                           18697751  6 -  18957592 --------------------------------------GT-T--AC-T
i Desmodus_rotundus.KZ672188.1                          I 6 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 321447 16 +    993696 T-T-----CC-TG--GA----C----T-----------GT-T--CC-T
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   2099 16 +    151128 T-T-----CC-TG--GA----C----T-----------GT-T--CC-T
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dipodomys_ordii.KN672545.1                              3655140 13 +   4240102 C-T-----TCCAC--GA----T----A-----------AA--------
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 26773 13 +     28912 C-T-----TCCAC--CA----T----A-----------AA--------
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                35093 16 -     73477 T-T-----CCCAG---A----T----A-----------GA-T--CC-T
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22994174 16 -  44670279 --T-----CTTCG--CT----G----A-----------GT-T--CT-C
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 11114 14 +     24177 T-T---C-----C--TA----T----A-----------GT-T--AC-T
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1490421  6 +   1727528 --------------------------------------AT-T--CC-T
i Elaphurus_davidianus.JRFZ01086400.1                   I 6 C 0
s Ellobius_lutescens.LOEQ01003611.1                        238497 20 -    369425 T-T-----CCAAG--AG----T----C--GT-C-----CC-T--CA-T
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           5607 20 -      7838 T-T-----CCTAG--AG----T----C--GT-C-----CC-T--CA-T
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85870085 15 +  99434291 --T-----TT-CC--AG----C----A-----------GT-T--CT-T
i Enhydra_lutris.KZ291749.1                             C 0 I 2
s Eptesicus_fuscus.JH977687.1                             4703140 15 +   6522550 --C-----CC-CT--GA----C----A-----------GT-T--AT-T
i Eptesicus_fuscus.JH977687.1                           I 1 C 0
s Equus_asinus.JREZ01000062.1                             5851866 14 -   7175178 --------CC-TG--GA----C----T-----------GT-T--CC-T
i Equus_asinus.JREZ01000062.1                           I 1 C 0
s Equus_caballus.CM000402.2                              13350369 14 +  41866177 --------CC-TG--GA----C----T-----------GT-T--CC-T
i Equus_caballus.CM000402.2                             I 1 C 0
s Equus_przewalskii.ATBW01073585.1                          11859 14 +     92910 --------CC-TG--GA----C----T-----------GT-T--CC-T
i Equus_przewalskii.ATBW01073585.1                      I 1 C 0
s Erinaceus_europaeus.JH835290.1                         11531415  7 +  16010500 ---------------------T----A-----------GA-C--T--T
i Erinaceus_europaeus.JH835290.1                        I 4 C 0
s Erythrocebus_patas.Contig8                             48770249 19 -  48907691 T-T-----CCCTG--GTCT--T----A-----------GC-A--CC-T
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          313969  6 +    330699 --------------------------------------GT-T--CC-T
i Eschrichtius_robustus.EscRob_flattened_line_685       I 6 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             60423  6 +     89355 --------------------------------------GT-T--CC-T
i Eubalaena_japonica.EubJap_flattened_line_7756         I 6 C 0
s Eulemur_albifrons.k141_715837                              4025 17 +     13586 T-T-----TTTTG--GA----T----G-----------GT-T--CC-T
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               3962 17 -      6809 T-T-----CTTTG--GA----T----G-----------GT-T--CC-T
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            10435 17 +     36558 T-T-----CTCTG--GA----T----G-----------GT-T--CC-T
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             6754 17 +     60246 T-T-----CTCTG--GA----T----G-----------GT-T--CC-T
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                10233 17 +    109717 T-T-----CTTTG--GA----T----G-----------GT-T--CC-T
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               14616 17 +     16540 T-T-----CTCTG--GA----T----G-----------GT-T--CC-T
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                14889 17 +     27497 T-T-----CTCTG--GA----T----G-----------GT-T--CC-T
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           17346 17 +     26808 T-T-----CTTTG--GA----T----G-----------GT-T--CC-T
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                32081 17 +     46535 T-T-----CTTTG--GA----T----G-----------GT-T--CC-T
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              14803 17 -     29447 T-T-----CTTTG--GA----T----G-----------GT-T--CC-T
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129891264 16 - 159252932 T-T-----TC-CC--AA----C----A-----------GT-T--CT-T
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129278336 16 - 158578461 T-T-----TC-CC--AA----C----A-----------GT-T--CT-T
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 19471 16 +     52776 T-T-----TC-CC--AA----C----A-----------GT-T--CT-T
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13891699 16 -  19261668 T-T-----CCAAG---A----T----A-----------AA-T--CC-T
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     209934 17 -    847004 T-T-----CCCCA--AA----G----A-----------GT-T--CC-T
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           12313 17 -     43889 T-T-----CCCCA--AA----G----A-----------GT-T--CC-T
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           9381 17 +     27357 T-T-----CCCTA--AA----G----A-----------GT-T--CC-T
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               155250 17 +    324696 A-T-----CCCTG--GA----T----A-----------GT-T--CC-T
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    180221  6 -    189561 --------------------------------------gt-t--ct-t
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 6 C 0
s Glis_glis.GliGli_scaffold_79770                           11865 17 -     18683 T-T-----CTGAG--AA----C----A-----------GA-T--CC-T
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               4319 19 -     14630 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119651418 19 - 195582420 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   76595 17 +    118900 T-T-----CTGAG--AA----C----A-----------GA-T--CC-T
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                          826 17 +     10286 T-T-----CTCTG--GA----T----G-----------GT-T--CC-T
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_1254239                            9002 17 +      9690 T-T-----CTCTG--GA----T----G-----------GT-T--CC-T
i Hapalemur_gilberti.k141_1254239                       C 0 C 0
s Hapalemur_griseus.k141_1387522                             4631 17 +     56096 T-T-----CTCTG--GA----T----G-----------GT-T--CC-T
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        27881 17 -     42470 T-T-----CTCTG--GA----T----G-----------GT-T--CC-T
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        44505 17 -     54384 T-T-----CTCTG--GA----T----G-----------GT-T--CC-T
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              15511 16 +     53719 T-T-----TC-CC--AA----T----A-----------GT-T--CT-T
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                26419  6 -     91191 --------------------------------------AT-T--CC-T
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 6 C 0
s Heterocephalus_glaber.JH602058.1                        2550075 16 +  31725842 T-T-----CCCAG---A----T----A-----------GA-T--CT-T
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               56515 17 +     73687 T-T-----TCCTG--CC----C----A-----------GG-G--TT-T
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              146044  6 +    277961 --------------------------------------GT-T--CC-T
i Hippopotamus_amphibius.HipAmp_scaffold_1308           I 6 C 0
s Hipposideros_armiger.JXIK01001085.1                      277319 20 -    477199 T-C-T-------C--CA--CACATCCA-----------GT-T--GC-T
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              6478 20 -      9143 T-C-T-------C--CA--CACATCCA-----------GT-T--AC-G
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      3720 19 -   7690867 T-G-----CCCTG--GTCT--T----A-----------GC-T--TC-T
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 14605 16 -     67322 T-T-----TC-CC--AA----C----A-----------GT-T--CT-T
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           17972 16 -    119109 T-T-----CCCAG---A----T----A-----------GA-T--CC-T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              4146 19 +      5897 T-G-----CCCTG--GTCT--T----A-----------GC-T--TC-T
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_624065                               1010 19 +      2112 T-G-----CCCTG--GTCT--T----A-----------GC-T--TC-T
i Hylobates_agilis.k141_624065                          C 0 C 0
s Hylobates_klossii.k141_466549                             10586 19 +     11537 T-G-----CCCTG--GTCT--T----A-----------GC-T--TC-T
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14623691 19 -  25970782 T-G-----CCCTG--GTCT--T----A-----------GC-T--TC-T
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                             947 19 -      2977 T-G-----CCCTG--GTCT--T----A-----------GC-T--TC-T
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     5148 16 +     22540 T-T-----CCCAG---A----T----A-----------GA-T--CC-C
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7124861 17 +  13083262 T-T-----CCCAG--GA----C----A-----------CA-T--CC-T
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_4418183                                    445 17 -      1457 T-T-----CCCTG--GA----T----G-----------GG-T--CC-T
i Indri_indri.k141_4418183                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               7963  6 +     17520 --------------------------------------GT-T--CC-T
i Inia_geoffrensis.IniGeo_flattened_line_66725          I 6 C 0
s Jaculus_jaculus.JH725517.1                              8564687 17 +  11848649 C-T-----CCAAG--GC----T----G-----------CA-G--CA-T
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               22583  6 +     37189 --------------------------------------GT-T--CC-T
i Kogia_breviceps.KogBre_flattened_line_35920           I 6 C 0
s Lagothrix_lagothricha.k141_12968                          49168 19 -    147782 T-T-----CCCTG--GTCT--T----A-----------GT-T--CC-T
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   112986 16 -    115756 T-C-----CC-CT--GA----C----A-----------GT-T--AT-T
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258406186 17 - 285822530 T-T-----CTCTG--GA----T----G-----------GT-T--CC-T
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        22952  3 +     39228 --------------------------------------------CC-T
i Lepilemur_ankaranensis.k141_884009                    I 3 C 0
s Lepilemur_dorsalis.k141_134267                            52327  3 +     63517 --------------------------------------------CC-T
i Lepilemur_dorsalis.k141_134267                        I 3 C 0
s Lepilemur_ruficaudatus.k141_617879                        77577  3 +    116806 --------------------------------------------CC-T
i Lepilemur_ruficaudatus.k141_617879                    I 3 C 0
s Lepilemur_septentrionalis.k141_578524                     30591  3 -     33031 --------------------------------------------CC-T
i Lepilemur_septentrionalis.k141_578524                 I 3 C 0
s Leptonychotes_weddellii.KB714749.1                      3084305 16 -   3498232 T-T-----TC-CC--AA----C----A-----------GT-T--CT-T
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    11940 17 +     22452 T-T-----CTCTA--AA----T----A-----------AT-C--CC-T
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            134916  6 +   3060487 --------------------------------------GT-T--CC-T
i Lipotes_vexillifer.KE558548.1                         I 6 C 0
s Lophocebus_aterrimus.ctg55                             19247317 19 +  19376315 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            9698 17 +     84689 T-T-----CTCTG--GA----G----A-----------GT-T--CC-T
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3777447 17 +   6799190 T-T-----CTCTA--GA----G----A-----------GT-T--CC-T
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20591042 17 -  62548349 T-T-----CCCTA--TA----C----A-----------AT-T--CT-T
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11086112 17 +  39895028 T-T-----TC-CCC-AA----T----A-----------AT-T--CT-T
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             19057 19 +     74745 T-T-----CCCTG--GTCT--T----A-----------CC-T--CC-T
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12705513 19 +  12821369 T-T-----CCCTG--GTCT--T----A-----------CC-T--CC-T
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                1158 19 -      3136 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           45975 19 +     63263 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                  678 19 -      2568 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 1264 19 -      7381 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  44482 19 -     79256 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196034590 19 + 196197964 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11444757 19 +  11645122 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   3429 19 -     46448 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                1101 19 -     13212 T-T-----CCCTG--GTCT--T----A-----------CC-T--CC-T
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 14781 19 -     55006 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43839899 19 +  43892939 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               16068 19 -     24607 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               3434 19 -     27140 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                700528 14 +    802869 T-T-T-------C--TA----C----A-----------GC-T--AC-T
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43436476 19 -  43563597 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4449302 19 -   4543643 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36872700 17 +  64221397 T-T-----CCAAG--GA----C----A-----------CA-T--CC-T
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       63330  8 -    234502 ---------------------C----A-----------GT-T--AC-T
i Megaderma_lyra.MegLyr_scaffold_3562                   I 4 C 0
s Mellivora_capensis.MelCap_flattened_line_146202             898 16 -      1999 T-T-----TT-CC--AA----C----A-----------GT-T--CT-T
i Mellivora_capensis.MelCap_flattened_line_146202       C 0 I 2
s Meriones_unguiculatus.MerUng_scaffold_52233               11413 20 +     15977 T-T-----CCTAG--GG----T----G---T----T-CCC-T--CA-G
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1045677 20 -  26018355 T-T-----CCTAG--GG----T----A----GC-C---CC-T--CA-T
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Microcebus_murinus.CM007691.1                          16509191 17 +  47401472 T-T-----CCCTG--GG----T----G-----------GT-T--CC-T
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  30619 17 -     48017 T-T-----CTTTA--CA----G----A-----------GT-T--CT-T
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               21627  6 -     32043 --------------------------------------GT-G--AC-T
i Micronycteris_hirsuta.MicHir_scaffold_37978           I 6 C 0
s Microtus_ochrogaster.CM001673.1                        22818787 20 -  98408828 T-T-----CCTGA--AG----T----C--GT-C-----CC-T--CA-T
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8208612 15 +  10048721 T-C-----CC-C---GA----C----A-----------GT-T--AC-T
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            33268 16 +     45743 C-C-----CC-CA--AA----C----A-----------GT-T--AC-T
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         1029 19 +     29742 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         9813 16 -    104932 T-T-----TC-CC--AA----C----A-----------GT-T--CT-C
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     4581 17 +      8497 T-T-----CCCTG--GG----T----A-----------GT-T--CC-T
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 145351  6 +    154973 --------------------------------------GT-T--CC-T
i Monodon_monoceros.MonMon_M_scaffold_5598              I 6 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                160128 16 +    265003 T-C-----CT-CA--GA----C----A-----------GT-T--AC-T
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 3522  6 -      4346 --------------------------------------GT-T--CC-T
i Moschus_moschiferus.MosMos_scaffold_146101            I 6 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  143202 16 -    168139 T-T-----TC-CC--AA----T----A-----------GT-T--CC-T
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          18502 12 -    100666 T-C-----CT-CT--GA----T----A-----------GT--------
i Murina_feae.MurFea_scaffold_2254                      C 0 I 1
s Mus_caroli.LT608236.1                                  70765284 20 +  92629107 T-T-----CCTAG--GG----T----G--GT-C-----CC-T--CA-T
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75488321 20 +  98207768 T-T-----CCTAG--GG----T----G--GT-C-----CC-T--CA-T
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67554557 20 +  89017189 T-T-----CCTAG--GG----T----G--GT-C-----CC-T--CA-T
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74329500 20 +  97876770 T-T-----CCTAG--GG----T----G--GT-C-----CC-T--CA-T
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             10576 17 +     98495 T-T-----CTGAG--AA----T----A-----------GA-T--CC-T
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4422470 16 -  28371801 T-T-----TT-CT--GA----C----A-----------GT-T--CT-T
i Mustela_putorius.JH417978.1                           C 0 I 2
s Myocastor_coypus.MyoCoy_scaffold_3653                     89031 16 -    117718 T-T-----CCCAG---A----T----C-----------AA-T--TC-T
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               966804 16 +   8389877 T-C-----CT-GT--GA----C----A-----------GT-T--AT-T
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5018480 16 +   6462685 T-C-----CT-GT--GA----C----A-----------GT-T--AT-T
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3464384 16 -   3747815 T-C-----CT-GT--GA----C----A-----------GT-T--AT-T
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         9599 16 +     66751 T-C-----CT-GT--GA----C----A-----------GT-T--AT-T
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3978 17 -      8794 T-T-----CCCTG--GA----C----A-----------GT-T--GA-T
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            117148  7 +    362372 T-T-----CCTAG-----------------------------------
i Nannospalax_galili.KL201303.1                         C 0 I 9
s Nasalis_larvatus.k141_153429                               7531 19 +     48152 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4483205 16 -  14209539 T-T-----TC-CC--AA----C----A-----------GT-T--CT-T
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3949964  6 -   4490290 --------------------------------------GT-T--CC-T
i Neophocaena_asiaeorientalis.KZ688543.1                I 6 I 1
s Noctilio_leporinus.NocLep_scaffold_12062                  48231 16 +     94413 T-C-----CT-CA--CA----T----A-----------AT-T--AT-T
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1439838                           1888 19 +      3718 T-G-----CCCTG--GTCT--T----A-----------GC-T--TC-T
i Nomascus_annamensis.k141_1439838                      I 31 I 22
s Nomascus_concolor.k141_226614                               248 19 -      5092 T-G-----CCCTG--GTCT--T----A-----------GC-T--TC-T
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_642452                            1031 19 +      2851 T-G-----CCCTG--GTCT--T----A-----------GC-T--TC-T
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_a.k141_595747                                  1669 19 +      4512 T-G-----CCCTG--GTCT--T----A-----------GC-T--TC-T
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                29153  5 +   3668941 ---------------------------------------T-T--CT-T
i Nyctereutes_procyonoides.CAJHUB010000786.1            I 9 C 0
s Nycticebus_bengalensis.LG16                            65566132 17 -  95554990 T-T-----CCCTA--GA----G----C-----------GT-T--CC-T
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            2861 17 +      6470 T-T-----CCCTA--GA----G----T-----------GT-T--CC-T
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65668470 17 +  89412551 T-T-----CCCTA--GA----G----A-----------GT-T--CC-T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4995025 17 -  23139505 T-T-----CTCTG--AG----T----A-----------AT-T--TC-C
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3684572 16 +  10294119 t-t-----ctcag---a----T----A-----------GA-T--TT-T
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             677850 16 -   3126709 T-T-----CC-CC--AA----C----A-----------GT-T--CT-T
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1078651  6 +   1425656 --------------------------------------AT-T--CC-T
i Odocoileus_virginianus.KZ101650.1                     I 6 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         35947  6 +     78940 --------------------------------------AT-T--CC-T
i Okapia_johnstoni.LVCL01S0017931.1                     I 6 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  124043 20 +    145789 T-T-----CCTAG--AG----T----C--GT-C-----CC-T--CA-T
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  35814 20 +     62360 T-T-----CCTAG--AG----C----G--GT-C-----CT-T--CA-T
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7223648  6 -   7562323 --------------------------------------GT-T--CC-T
i Orcinus_orca.KB316965.1                               I 6 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              43359 17 -     66828 T-T-----CCCTG--AG----C----T-----------AT-T--CT-T
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141874964 17 + 163896628 t-t-----ctctg--aa----t----a-----------aT-C--CC-C
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      306429 17 -    505867 T-T-----TC-CCC-AA----C----A-----------AT-T--CT-T
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       38030 17 +     38679 T-T-----CCCTA--AA----G----A-----------GT-T--CC-T
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18007458 17 -  38779656 T-T-----CCCTA--AA----G----A-----------GT-T--CC-T
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134076213  6 - 275406953 --------------------------------------AT-T--CC-T
i Ovis_aries.CM001582.2                                 I 6 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      77427  6 +    140051 --------------------------------------AT-T--CC-T
i Ovis_canadensis.OviCan_scaffold_6251                  I 6 C 0
s Pan_paniscus.CM003386.1                               127573679 19 - 205426864 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120150832 19 - 196562556 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  32665 16 +    295523 T-T-----TC-CC--AA----C----A-----------GT-T--CT-T
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3636399 16 +  18214204 T-T-----TC-CC--AA----C----A-----------GT-T--CT-T
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5026046 16 -   6340057 T-T-----TC-CC--AA----C----A-----------GT-T--CT-T
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1065074  6 -   1292953 --------------------------------------AT-T--CC-T
i Pantholops_hodgsonii.KE114631.1                       I 6 C 0
s Papio_anubis.CM001492.2                               188155267 19 - 188283584 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             3584 19 +      5367 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47512655 19 +  47705337 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 66633 19 -    104429 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    5165 19 +     14967 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 1026 19 -      7628 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113982 16 -    135482 T-T-----TT-CC--AA----C----A-----------GT-T--CA-T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           4444 17 -     23713 T-T-----CCCTA--AA----G----A-----------GT-T--CC-T
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            23753 17 -     27972 T-T-----CCCTA--AA----G----A-----------GT-T--CC-T
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      42605 17 -     45160 C-T-----TCCAT--GG----T----A-----------GA-T--CA-T
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4949003 20 -   8017169 T-T-----CCTAG--AG----C----G--GT-C-----CC-T--CC-T
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    11507 16 -     36578 T-T-----CCCTG---A----C----A-----------AA-T--CC-T
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            120265  6 -    122454 --------------------------------------GT-T--CC-T
i Phocoena_phocoena.PhoPho_flattened_line_11948         I 6 C 0
s Piliocolobus_badius.k141_1987485                           1053 19 -      5908 T-T-----CCCTC--GTCT--T----A-----------GC-T--CC-T
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       1673 19 -     17985 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            1040 19 +      7694 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26739518 19 +  26888534 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            96426 16 +    112873 G-C-----TC-CC--GA----C----A-----------GT-T--AC-T
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        I 256 C 0
s Pithecia_albicans.k141_991845                             42650 19 -     61926 T-T-----CCCTG--ATCT--T----A-----------GT-T--CC-T
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        24081 19 +     78826 T-T-----CCCTG--ATCT--T----A-----------GT-T--CC-T
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              8030 19 -     15800 T-T-----CCCTG--ATCT--T----A-----------GT-T--CC-T
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        11228 19 -     16101 T-T-----CCCTG--ATCT--T----A-----------GT-T--CC-T
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          4537 19 +      9673 T-T-----CCCTG--ATCT--T----A-----------GT-T--CC-T
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13473533 19 -  19735023 T-T-----CCCTG--ATCT--T----A-----------GT-T--CC-T
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           12439 19 -     31692 T-T-----CCCTG--ATCT--T----A-----------GT-T--CC-T
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           4333  6 +     21690 --------------------------------------GT-T--CC-T
i Platanista_gangetica.PlaMin_flattened_line_72990      I 6 C 0
s Plecturocebus_bernhardi.k141_959214                       21874 19 +     44506 T-T-----CCCTG--GTCT--T----A-----------GT-T--CC-T
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        22086 19 +     67491 G-T-----CCCTG--GTCT--T----A-----------GT-T--CC-T
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      12325 19 -     98129 T-T-----CCCTG--GTCT--T----A-----------GT-T--CC-T
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     21925 19 +    147771 T-T-----CCCTG--GTCT--T----A-----------GT-T--CC-T
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        22180 19 -     23762 T-T-----CCCTG--GTCT--T----A-----------GT-T--CC-T
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          2646 19 -     55515 T-T-----CCCTG--GTCT--T----A-----------GT-T--CC-T
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         21999 19 +    152463 T-T-----CCCTG--GTCT--T----A-----------GT-T--CC-T
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      8759 19 +      8943 T-T-----CCCTG--GTCT--T----A-----------GT-T--CC-T
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                         11721 19 +    134592 T-T-----CCCTG--GTCT--T----A-----------GT-T--CC-T
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          22309 19 -     75465 T-T-----CCCTG--GTCT--T----A-----------GT-T--CC-T
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              186204 19 -    373494 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19806852 19 +  19899266 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               4775 19 -     15069 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              4909 19 +     14865 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                76379 17 +     78963 T-T-----TCCTG--CC----C----A-----------GG-G--TT-T
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6847567 17 +  12164890 T-T-----CTCTG--GA----T----G-----------GT-T--CC-T
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    666786 17 -   2312742 T-T-----CCCTG--GA----T----G-----------GG-T--CC-T
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         2613 17 +     11805 T-T-----CCCTG--GA----T----G-----------GG-T--CC-T
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           41949 17 +     52369 T-T-----CCCTG--GA----T----G-----------GG-T--CC-T
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         34339 17 -     44753 T-T-----CCCTG--GA----T----G-----------GG-T--CC-T
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            16259 17 +     27322 T-T-----CCCTG--GA----T----G-----------GG-T--CC-T
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       15895 17 -     53241 T-T-----CCCTG--GA----T----G-----------GG-T--CC-T
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         38167 17 -     48185 T-T-----CCCTG--GA----T----G-----------GG-T--CC-T
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           32951 20 +     77221 T-T-----CCTAG--GG----T----G---T----T-CCC-T--CA-G
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            2795 16 -     27784 T-C-----CT-CA--GA----C----A-----------AT-T--AC-T
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        244567 16 -    344369 T-T-----TT-CC--AA----C----A-----------GT-T--CT-T
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 I 2
s Pteropus_alecto.KB031157.1                             13244915 14 -  17261082 t-t----c----c--ta----c----a-----------gt-t--ac-t
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             602865 14 -   3946241 t-t----c----c--ta----c----a-----------gt-t--ac-t
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131532629 16 - 161321710 T-T-----TC-CC--AA----C----A-----------GT-T--CT-T
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             28893 19 +     56732 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6805384 19 +   6970761 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             4778 19 +     18040 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                14728  6 +     68503 --------------------------------------AT-T--AC-T
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 6 C 0
s Rattus_norvegicus.chr11                                13914326 20 +  90463843 T-T-----CCTAG--GG----T----G--GT-C-----TC-T--CA-G
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1786725 16 +   2252614 T-C---C-----C--CA--GAC----A-----------GT-T--AC-T
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_1391695                           1006 19 -      1866 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Rhinopithecus_bieti.k119_1391695                      C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206376663 19 - 206558726 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44855563 19 -  45163003 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                18205 14 +    109198 T-T---C-----T--TA----C----A-----------GT-T--AC-T
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       6530  6 +     12214 --------------------------------------AT-T--CC-T
i Saiga_tatarica.SaiTat_scaffold_82192                  I 6 C 0
s Saimiri_boliviensis.NW_024100938.1                     15671737 19 -  43202129 T-T-----CCCTG--GTCT--T----A-----------GT-T--CC-T
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        3654 19 +     34089 T-T-----CCCTG--GTCT--T----A-----------GT-T--CC-T
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              3595 19 -     60842 T-T-----CCCTG--GTCT--T----A-----------GT-T--CC-T
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              3690 19 +     67014 T-T-----CCCTG--GTCT--T----A-----------GT-T--CC-T
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              3668 19 +     60816 T-T-----CCCTG--GTCT--T----A-----------GT-T--CC-T
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 3605 19 -     76454 T-T-----CCCTG--GTCT--T----A-----------GT-T--CC-T
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17340331 19 -  30362882 T-T-----CCCTG--GTCT--T----A-----------GT-T--CC-T
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         19690 19 -     62485 T-T-----CCCTG--GTCT--T----A-----------GT-T--CC-T
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   30287 16 -    114521 T-T-----CC-TG--GA----C----A-----------GC-T--CC-T
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        2390 19 +     15331 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       7787 19 +     20762 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         117785 19 +    130994 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           36576 19 +     46263 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     29690 19 +     42640 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        12734 19 +     30600 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   98586 20 -    120886 T-C-----CCTAG--TA----T----G-----C--T-CCC-T--CA-T
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            16907 16 +    739146 T-A-----CA-CA--AA----T----A-----------GT-C--TC-T
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17749528 15 -  27805282 -----------CA--AA----T----C-----------ATTCCTCC-T
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2238781 17 +   2842873 T-T-----CCCAG--GA----C----A-----------CA-T--CC-T
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             233315 16 -    276980 T-T-----TC-CC--GA----C----A-----------GT-T--CT-T
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            25868 16 +     62062 T-T-----TC-CC--AA----T----A-----------GT-T--CT-T
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189270800  6 + 218635234 --------------------------------------at-t--ct-t
i Sus_scrofa.CM000824.4                                 I 6 C 0
s Symphalangus_syndactylus.tarseq_24                        13948 19 -  13920577 T-G-----CCCTG--GTCT--T----A-----------GC-T--TC-T
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               4959 16 -      6213 T-C-----CC-CA--GA----C----A-----------GT-T--AC-T
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               13653 17 +     45698 T-T-----CCCTG--GA----C----A-----------GT-T--TC-T
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      805656 16 +   1148477 T-T-----CC-TG--GA----C----T-----------GT-T--CC-T
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  56313 16 +     99546 T-T-----CC-TG--GA----C----T-----------GT-T--CC-T
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               25474 17 +     42269 T-T-----CCATG--GA----T----A-----------GT-T--CC-T
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               58790 17 +     65473 T-T-----CCATG--GA----T----A-----------GT-T--CC-T
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194006794 19 - 194193292 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             38302 16 -     47444 T-T-----CCCTG---A----T----A-----------GA-T--CC-T
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  4516 17 +      6782 T-T-----CCCTG--GA----C----A-----------GT-T--TC-T
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  134811  6 -    259118 --------------------------------------GT-T--AC-T
i Tonatia_saurophila.TonSau_scaffold_3334               I 6 C 0
s Trachypithecus_auratus.k141_738098                        25897 19 +     38948 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   19624 19 -     32910 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      1011 19 -     12939 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                        946 19 -     14244 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           42344 19 -     54611 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                         150 19 -     11566 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     2322 19 -     15592 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                           979 19 +     14371 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  50731 19 +     51589 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       13912 19 +     14732 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       4384 19 -     28054 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44659184 19 -  44834318 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       1487 19 +     13828 T-T-----CCCTG--GTCT--T----A-----------GC-T--CC-T
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   4109  6 +     90398 --------------------------------------GT-T--CC-C
i Tragulus_javanicus.TraJav_scaffold_14717              I 6 C 0
s Trichechus_manatus.JH594618.1                          16081504 17 +  31416278 t-t-----ccctg--ca----c----t-----------gt-t--cc-t
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69312365  6 -  96451834 --------------------------------------GT-T--CC-T
i Tursiops_truncatus.MRVK01000923.1                     I 6 C 0
s Uropsilus_gracilis.UroGra_scaffold_139357                   819  8 +      2103 ---------------------T----G-----------GA-T--CC-T
i Uropsilus_gracilis.UroGra_scaffold_139357             I 5 C 0
s Ursus_maritimus.KK498671.1                              6513109 16 +  28682327 T-T-----TC-CC--AA----C----G-----------GT-T--CT-T
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  4271 17 -     20643 T-T-----CTCTG--GA----T----A-----------GT-T--CC-T
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             23812 17 -     33872 T-T-----CTCTG--GA----T----A-----------GT-T--CC-T
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1523603  6 -   2331223 --------------------------------------GT-T--TC-T
i Vicugna_pacos.KN269600.1                              I 6 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                136513 18 -    281493 T-T-----TC-CCCCAA----C----A-----------AT-T--CT-T
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       125884 17 -    134049 T-T-----CCCAG--AA----C----A-----------CA-T--CC-T
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        212585 16 -    227762 T-T-----TC-CC--AA----C----A-----------GT-T--CT-T
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           5862  6 -      8775 --------------------------------------GT-T--CC-T
i Ziphius_cavirostris.ZipCav_flattened_line_127025      I 6 C 0
e Dinomys_branickii.DinBra_scaffold_1996                   156356 54 +    228994 I
e Manis_pentadactyla.KN017078.1                             35015 87 +     58827 I
e Manis_javanica.JSZB01003966.1                            144940 87 +    252755 I
e Elephantulus_edwardii.JH947210.1                        7804622 10712 +  15467074 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     14107 296 -     20485 I
e Hylobates_pileatus_a.tarseq_592                             33311  5 -     60944 I
e Tupaia_tana.TupTan_flattened_line_68454                    4046  0 +     13056 C
e Tupaia_chinensis.KB320831.1                             2791778  0 -   3938065 C
e Nomascus_siki_b.tarseq_80                             24175  0 -  18771707 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               10953 10 +    209709 AAGTTTCTCT
s Acinonyx_jubatus.LLWD01000356.1                         2032304 10 +   3721120 AAATTTCTCT
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    111307  9 -    189883 AAG-ACCTCT
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10655649  6 +  23371972 AATTTT----
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 I 3
s Ailurus_fulgens.LNAC01000003.1                          7092798 10 -  16596857 AAGTTTCACT
i Ailurus_fulgens.LNAC01000003.1                        I 222 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   11973  9 -     22067 TAA-GTTTCT
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                    312 10 -     60446 AAGTTTCTCT
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         1031 10 -     29318 AAGTTTCTCT
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_21674                           1248 10 -      1421 AAGTTTCTCT
i Allochrocebus_preussi.k141_21674                      C 0 C 0
s Allochrocebus_solatus.k141_371672                           925 10 -     80423 AAGTTTCTCT
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             9218 10 -     18050 AAGTTTCTCT
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                 10308 10 -     11521 AAGTTTCTCT
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              9895 10 -     21359 AAGTTTCTCT
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_298055                                 1191 10 +      1823 AAGTTTCTCT
i Alouatta_juara.k141_298055                            C 0 C 0
s Alouatta_macconnelli.k141_1331706                          9191 10 -     10438 AAGTTTCTCT
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            5847 10 +      7047 AAGTTTCTCT
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             9127 10 +     10410 AAGTTTCTCT
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            2937 10 -      4927 AAGTTTCTCT
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             5866 10 +      6429 AAGTTTCTCT
i Alouatta_seniculus.k141_990213                        I 22 C 0
s Ammotragus_lervia.NIVO01013474.1                        3519077 10 +   4113121 TAGTTTCTCT
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      389247 10 -    631301 GAGTTTCTCT
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            29660 10 +     33004 TAGTTTCTCT
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 61577 10 +     78111 AAGTTTCTCT
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            4518 10 +     22701 AAGTTTCTCT
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5748475 10 +   9889416 AAGTTTCTCT
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             5060 10 -    104377 AAGTTTCTCT
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               5066 10 +     23246 AAGTTTCTCT
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     2727 10 +      5067 AAGTGTCTCT
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      17247 10 +     17483 ACGTTTCTCT
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 7649 10 -     29036 GAGTTTGTCT
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9538323 10 +  39197703 AAGTTTCTCT
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             59594 10 +     85812 AAGTTTCTCT
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                10606 10 +     89302 AGGTTTCTCT
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             15111 10 -     58268 AAGTTTCTCT
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             63102 10 +    119057 AAGTTTCTCT
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               5071 10 -     25888 AAGTTTCTCT
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 5701 10 -     16375 AAGTTTCTCT
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              2021 10 +      2719 AAGTTTCTCT
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26379090 10 +  51448160 TAGTTCTTCC
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        4322 10 -     13118 TAGTTCTTCC
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   42140 10 -     72089 TAGTTTCTCT
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6558451 10 +   6870073 TAGTTTCTCT
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138138677 10 - 161108492 TAGTTTCTCT
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     571064 10 -    998990 TAGTTTCTCT
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136294410 10 - 158972876 TAGTTTCTCT
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1230177 10 -   1914593 TAATTTCTCT
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               112964 10 -    171031 AAATTTCTCT
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 11992 10 +    125063 AAATTTCTCT
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                14037 10 -    216513 AAATTTCTCT
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        6577 10 -    134917 AAATTTCTCT
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3218502 10 -   8989139 AAGTTTTCCT
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           396207 10 -  15254737 AAGTTTTCCT
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2971940 10 +   6889770 AAGTTTTCCT
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11517476 10 +  39901454 AAGTTTTGCT
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   12501 10 +     87036 AAGTTTTGCT
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11264141 10 -  35597290 AAGTTTTGCT
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11086673 10 +  39895921 AAGTTTTGCT
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16453692 10 -  44759192 AAGTTTTGCT
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21324153 10 + 157394656 TAGTTTCTCT
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135705380 10 - 157403528 TAGTTTCTCT
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_979108                   982 10 -      1248 TCGTGTCTCT
i Capromys_pilorides.CapPil_scaffold_979108             I 16 C 0
s Carlito_syrichta.NW_007248099.1                          308007 10 +    345090 AAGTTTCTCT
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               58448 10 +     67245 GAGTTTCTCT
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   29674  7 +     33760 CAGT---TCT
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   157716 10 -    276539 AAGTTTCTCT
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15785617  7 -  24422027 ---NGTCTCT
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15797551  7 -  24440124 ---TGTCTCT
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       175742  7 +    436027 ---TGTCTCT
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18889807 10 -  29618158 AAGTTTCTCT
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 7351 10 -     26817 AAGTTTCTCT
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                11591 10 +     25043 AAGTTTCTCT
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         7040 10 +     21754 AAGTTTCTCT
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4362816 10 +   7569818 AAATTTCTCT
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         2568 10 -      9338 AAATTTCTCT
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6554247 10 +   6739814 AAGTTTCTCT
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      25724 10 +     60454 AAGTTTCTCT
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                           929 10 -     21101 AAGTTTCTCT
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         58239 10 -    107033 AAGTTTCTCT
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        1131 10 -     17608 AAGTTTCTCT
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          28626 10 +     30494 AAGTTTCTCT
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          57472 10 -     59240 AAGTTTCTCT
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          1173 10 +     16677 AAGTTTCTCT
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           23331 10 +     35983 AAGTTTCTCT
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11989859 10 +  12117833 AAGTTTCTCT
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46476617 10 +  46592721 AAGTTTCTCT
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      40168 10 -     45581 AAGTTTCTCT
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       1174 10 +     35577 AAGTTTCTCT
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                         950 10 -     25661 AAGTTTCTCT
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                         928 10 -     17744 AAGTTTCTCT
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        20537 10 +     37128 AAGTTTCTCT
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           1762 10 -      6963 GAACTTTCCT
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           57998 10 -     68416 AAGTTTCTCT
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            7041 10 +     13308 AAGTTTCTCT
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             4607 10 -     18223 AAGTTTCTCT
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             21630 10 +     25473 AAGTTTCTCT
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           40665 10 +     57117 AAGTTTCTCT
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          45344 10 +     54541 AAGTTTCTCT
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15960759 10 +  43084221 AAGTATCTCT
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         70166 10 +    196370 AAATTTCTCT
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          14346 10 +     40510 AAATTTCTCT
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15138090 10 -  15256731 AAGTTTCTCT
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      33137 10 -     53260 AAGTTTCTCT
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101143701 10 + 101219884 AAGTTTGTCT
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                15434 10 -     21363 TAATTTTCCT
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           760742 10 +    964067 TAATTTTCCT
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10885467 10 +  10971483 AAGTTTCTCT
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147663631 10 + 156195979 AAGTTTCTCT
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            15616 10 +     23629 AAGTTTCTCT
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60611560  8 +  78930452 TA--TTTTGT
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         38554 10 -     40477 AAGTTTGCCT
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 277275  9 -    399297 AAC-ACCTCT
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53027959  6 +  72327488 AA----ACCT
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             18587  6 -     19186 AAGTAT----
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            50319 10 -     70449 AAGTTTCTCT
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  207174 10 -    956709 AAATGTCTCT
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 29763 10 -     67205 GAATGTCTCA
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                16770 10 +     26546 AAGTGCCTCT
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             57862 10 -    236241 AAATGTCTCT
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          182597 10 -   6883506 GAATTTTCCC
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16843849 10 +  31942871 AAGTTTCTCT
i Daubentonia_madagascariensis.ctg11                    C 0 I 8
s Delphinapterus_leucas.KZ290064.1                       80035769 10 -  96802777 TAGTTCCTCT
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18697757 10 -  18957592 GAGTTTCTCT
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 321463 10 +    993696 AAATTTCTCC
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   2115 10 +    151128 AAATTTCTCT
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dipodomys_ordii.KN672545.1                              3655153  5 +   4240102 -----CCTCT
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 26786  5 +     28912 -----CCTCT
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                35109 10 -     73477 AAATGTCTCT
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22994190  2 -  44670279 GA--------
i Echinops_telfairi.JH980316.1                          C 0 I 422
s Eidolon_helvum.KE772537.1                                 11128 10 +     24177 AAGTTTCTCT
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1490427 10 +   1727528 TAGTTTCTCT
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        238517  9 -    369425 AAG-ACGTCT
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           5627  9 -      7838 AAG-ACGTCT
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85870102  8 +  99434291 --GTTTCACT
i Enhydra_lutris.KZ291749.1                             I 2 C 0
s Eptesicus_fuscus.JH977687.1                             4703155 10 +   6522550 AACTTTCTCT
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5851880 10 -   7175178 AACTCTCTCT
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13350383 10 +  41866177 AACTCTCTCT
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          11873 10 +     92910 AACTCTCTCT
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11531422 10 +  16010500 AAATTTCTTT
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48770268 10 -  48907691 AAGTTTCTCT
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          313975 10 +    330699 TAGTTCCTCC
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             60429 10 +     89355 TAGTTCCTCT
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              4042 10 +     13586 AAGTTTCTCT
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               3979 10 -      6809 AAGTTTCTCT
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            10452 10 +     36558 AAGTTTCTCT
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             6771 10 +     60246 AAATTTCTCT
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                10250 10 +    109717 AAGTTTCTCT
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               14633 10 +     16540 AAATTTCTCT
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                14906 10 +     27497 AAGTTTCTCT
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           17363 10 +     26808 AAGTTTCTCT
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                32098 10 +     46535 AAGTTTCTCT
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              14820 10 -     29447 AAGTTTCTCT
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129891280 10 - 159252932 AAATTTCTCT
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129278352 10 - 158578461 AAATTTCTCT
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 19487 10 +     52776 AAATTTCTCT
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13891715 10 -  19261668 AAGTATCTCT
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     209951 10 -    847004 AAGTTTCTCT
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           12330 10 -     43889 AAGTTTCTCT
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           9398 10 +     27357 AAGTTTCTCT
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               155267 10 +    324696 AAATTACTCC
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    180227 10 -    189561 tagtttctct
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           11882 10 -     18683 AAATGTCTCT
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               4338 10 -     14630 AAGTTTCTCT
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119651437 10 - 195582420 AAGTTTCTCT
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   76612 10 +    118900 AAGTGTCTAT
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                          843 10 +     10286 AAGTTTCTCT
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_1254239                            9019 10 +      9690 AAGTTTCTCT
i Hapalemur_gilberti.k141_1254239                       C 0 C 0
s Hapalemur_griseus.k141_1387522                             4648 10 +     56096 AAGTTTCTCT
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        27898 10 -     42470 AAGTTTCTCT
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        44522 10 -     54384 AAGTTTCTCT
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              15527 10 +     53719 AAGTTTTTCT
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                26425 10 -     91191 TAGTTTCTCT
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2550091 10 +  31725842 AAGTGTCTTT
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               56532  9 +     73687 GAGTTTCTC-
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              146050 10 +    277961 TACTTTCTCT
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      277339 10 -    477199 AAGATTGTCT
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              6498 10 -      9143 AAGGTTGTCT
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      3739 10 -   7690867 AAGTTTCTCT
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 14621 10 -     67322 ACGTTTCTCT
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           17988 10 -    119109 AAACATCTCT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              4165 10 +      5897 AAGTTTCTCT
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_624065                               1029 10 +      2112 AAGTTTCTCT
i Hylobates_agilis.k141_624065                          C 0 C 0
s Hylobates_klossii.k141_466549                             10605 10 +     11537 AAGTTTCTCT
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14623710 10 -  25970782 AAGTTTCTCT
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                             966 10 -      2977 AAGTTTCTCT
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     5164 10 +     22540 AAGTGTCTCT
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7124878  8 +  13083262 --GTGTCTCT
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_4418183                                    462 10 -      1457 AAGTTTCTCT
i Indri_indri.k141_4418183                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               7969 10 +     17520 TAGCTCCTCT
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8564704  9 +  11848649 CAA-GTCTCT
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               22589 10 +     37189 TAGTTCCTCT
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          49187 10 -    147782 AAATTTCTCT
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   113002 10 -    115756 AACTTTCTCT
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258406203 10 - 285822530 AAGTTTCTCT
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        22955 10 +     39228 AAGTTTCTCT
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            52330 10 +     63517 AAGTTTCTCT
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        77580 10 +    116806 AAGTTTCTCT
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     30594 10 -     33031 AAGTTTCTCT
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3084321 10 -   3498232 AAGTTTCCCT
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    11957 10 +     22452 AATTTTCTCT
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            134922 10 +   3060487 TAGTTCCTCT
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19247336 10 +  19376315 AAGTTTCTCT
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            9715 10 +     84689 AAGTTTATCT
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3777464 10 +   6799190 AGGTTTATCT
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20591059 10 -  62548349 GAGTTTCCTT
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11086129 10 +  39895028 AAGTTTTGCT
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             19076 10 +     74745 AAGTTTCTCT
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12705532 10 +  12821369 AAGTTTCTCT
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                1177 10 -      3136 AAGTTTCTCT
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           45994 10 +     63263 AAGTTTCTCT
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                  697 10 -      2568 AAGTTTCTCT
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 1283 10 -      7381 AAGTTTCTCT
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  44501 10 -     79256 AAGTTTCTCT
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196034609 10 + 196197964 AAGTTTCTCT
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11444776 10 +  11645122 AAGTTTCTCT
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   3448 10 -     46448 AAGTTTCTCT
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                1120 10 -     13212 AAGTTTCTCT
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 14800 10 -     55006 AAGTTTCTCT
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43839918 10 +  43892939 AAGTTTCTCT
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               16087 10 -     24607 AAGTTTCTCT
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               3453 10 -     27140 AAGTTTCTCT
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                700542 10 +    802869 AAGTTTCTTT
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43436495 10 -  43563597 AAGTTTCTCT
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4449321 10 -   4543643 AAGTTTCTCT
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36872717  8 +  64221397 --GTGTCTCT
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       63338 10 -    234502 AAGTTTGTCT
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_146202             916  8 -      1999 --GTTTCCCT
i Mellivora_capensis.MelCap_flattened_line_146202       I 2 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               11433  9 +     15977 AAG-ACCTCT
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1045697  9 -  26018355 AAG-ACCCAT
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Microcebus_murinus.CM007691.1                          16509208 10 +  47401472 AAGTTTCTCT
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  30636  2 -     48017 GA--------
i Microgale_talazaci.MicTal_scaffold_34660              C 0 I 409
s Micronycteris_hirsuta.MicHir_scaffold_37978               21633 10 -     32043 AAGTTTCTCT
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22818807  9 -  98408828 AAG-ACATCT
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8208627 10 +  10048721 GAGTTTCTCT
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            33284 10 +     45743 GAGTTTCTCT
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         1048 10 +     29742 AAGTTTCTCT
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         9829 10 -    104932 AAGTTTCCCT
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     4598 10 +      8497 AAGTTTCTCT
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 145357 10 +    154973 TAGTTCCTCT
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                160144  9 +    265003 A-GTTTTCCT
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 3528 10 -      4346 TAGTTTCTCT
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  143218 10 -    168139 AAGTTTCTCT
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          18515 10 -    100666 AACTTTCTCT
i Murina_feae.MurFea_scaffold_2254                      I 1 C 0
s Mus_caroli.LT608236.1                                  70765304  9 +  92629107 AAG-CCCTCT
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75488341  9 +  98207768 AAG-CCCTCT
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67554577  9 +  89017189 AGG-CCCTCT
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74329520  9 +  97876770 AAG-CCCTCT
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             10593 10 +     98495 AAGTGTTTCT
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4422488  8 -  28371801 --GTTTCACT
i Mustela_putorius.JH417978.1                           I 2 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     89047  6 -    117718 AAGGG----T
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               966820 10 +   8389877 AACTTTCTCT
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5018496 10 +   6462685 AACTTTCTCT
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3464400 10 -   3747815 AACTTTCTCT
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         9615 10 +     66751 AACTTTCTCT
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             3995 10 -      8794 GGATTTTTCT
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            117164  9 +    362372 AAG-GCCTCT
i Nannospalax_galili.KL201303.1                         I 9 C 0
s Nasalis_larvatus.k141_153429                               7550 10 +     48152 AAGTTTCTCT
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4483221 10 -  14209539 AAGTTTCCCT
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3949971 10 -   4490290 TAGTTCCTCT
i Neophocaena_asiaeorientalis.KZ688543.1                I 1 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  48247 10 +     94413 AAATTTCCCT
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_302224                            1007 10 +      1516 AAGTTTCTCT
i Nomascus_annamensis.k141_302224                       I 19 C 0
s Nomascus_concolor.k141_226614                               267 10 -      5092 AAGTTTCTCT
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_642452                            1050 10 +      2851 AAGTTTCTCT
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_a.k141_595747                                  1688 10 +      4512 AAGTTTCTCT
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                29158 10 +   3668941 AAGTTTTGCT
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65566149 10 -  95554990 AAGTTTCTCT
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            2878 10 +      6470 AAGTTTCTCT
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65668487 10 +  89412551 AAGTTTCTCT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4995042 10 -  23139505 ATCATTCTCT
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3684588 10 +  10294119 GAGTGTCTCA
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             677866 10 -   3126709 AAGTTTCACT
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1078657 10 +   1425656 TAGTTTCTCT
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         35953 10 +     78940 TAGTTTCGCT
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  124063  9 +    145789 AAG-ACCTCT
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  35834  9 +     62360 AAG-ACCTCT
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7223654 10 -   7562323 TAGTTCCTCT
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              43376  2 -     66828 GA--------
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 I 16
s Oryctolagus_cuniculus.CM000803.1                      141874981 10 + 163896628 AATTTTCCTT
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      306446 10 -    505867 AAGTTTTGCT
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       38047 10 +     38679 AAGTTTCTCT
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18007475 10 -  38779656 GAGTTTCTCT
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134076219 10 - 275406953 TAGTTTCTCT
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      77433 10 +    140051 TAGTTTCTCT
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127573698 10 - 205426864 AAGTTTCTCT
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120150851 10 - 196562556 AAGTTTCTCT
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  32681 10 +    295523 AAATTTCTCT
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3636415 10 +  18214204 AAATTTCTCT
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5026062 10 -   6340057 AAATTTCTCT
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1065080 10 -   1292953 TAGTTTCTCT
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188155286 10 - 188283584 AAGTTTCTCT
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             3603 10 +      5367 AAGTTTCTCT
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47512674 10 +  47705337 AAGTTTCTCT
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 66652 10 -    104429 AAGTTTCTCT
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    5184 10 +     14967 AAGTTTCTCT
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 1045 10 -      7628 AAGTTTCTCT
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    113998 10 -    135482 AAGTTTCTCT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           4461 10 -     23713 AAGTTTCTCA
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            23770 10 -     27972 AAGTTTCTCA
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      42622  9 -     45160 AAG-ATCTCT
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4949023  9 -   8017169 AAG-ACCTCT
i Peromyscus_maniculatus.KI615518.1                     C 0 I 79
s Petromus_typicus.PetTyp_scaffold_33007                    11523 10 -     36578 AAGTGCCTCT
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            120271 10 -    122454 TAGTTCCTCT
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1987485                           1072 10 -      5908 AAGTTTCTTT
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       1692 10 -     17985 AAGTTTCTTT
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            1059 10 +      7694 AAGTTTCTTT
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26739537 10 +  26888534 AAGTTTCTTT
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            96442 10 +    112873 AACTTTCTCT
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             42669 10 -     61926 AAGTTTCTCT
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        24100 10 +     78826 AAGTTTCTCT
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              8049 10 -     15800 AAGTTTCTCT
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        11247 10 -     16101 AAGTTTCTCT
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          4556 10 +      9673 AAGTTTCTCT
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13473552 10 -  19735023 AAGTTTCTCT
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           12458 10 -     31692 AAGTTTCTCT
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           4339 10 +     21690 TAGTTCCTCT
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       21893 10 +     44506 AAGTTTCTCT
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        22105 10 +     67491 AAGTTTCTCT
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      12344 10 -     98129 AAGTTTCTCT
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     21944 10 +    147771 AAGTTTCTCT
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        22199 10 -     23762 AAGTTTCTCT
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          2665 10 -     55515 AAGTTTCTCT
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         22018 10 +    152463 AAGTTTCTCT
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      8778 10 +      8943 AAGTTTCTCT
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                         11740 10 +    134592 AAGTTTCTCT
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          22328 10 -     75465 AAGTTTCTCT
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              186223 10 -    373494 AAGTTTCTCT
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19806871 10 +  19899266 AAGTTTCTCT
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               4794 10 -     15069 AAGTTTCTCT
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              4928 10 +     14865 AAGTTTCTCT
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                76396  9 +     78963 GAGTTTCTC-
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6847584 10 +  12164890 AAGTTTCTCT
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    666803 10 -   2312742 AAGTTTCTCT
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         2630 10 +     11805 AAGTTTCTCT
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           41966 10 +     52369 AAGTTTCTCT
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         34356 10 -     44753 AAGTTTCTCT
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            16276 10 +     27322 AAGTTTCTCT
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       15912 10 -     53241 AAGTTTCTCT
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         38184 10 -     48185 AAGTTTCTCT
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           32971  9 +     77221 AAG-ATCTCT
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            2811 10 -     27784 AAGTTTCACT
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        244585  8 -    344369 --GCTTCACT
i Pteronura_brasiliensis.PteBra_flattened_line_1343     I 2 C 0
s Pteropus_alecto.KB031157.1                             13244929 10 -  17261082 aagtttctct
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             602879 10 -   3946241 aagtttctct
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131532645 10 - 161321710 AAGTTTCTCT
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             28912 10 +     56732 AAGTTTCTCT
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6805403 10 +   6970761 AAGTTTCTCT
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             4797 10 +     18040 AAGTTTCTCT
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                14734 10 +     68503 TAGTTTCTCT
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13914346  9 +  90463843 AAG-CCTTCT
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1786741 10 +   2252614 AAGATTGTCT
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_1391695                           1025 10 -      1866 AAGTTTCTCT
i Rhinopithecus_bieti.k119_1391695                      C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206376682 10 - 206558726 AAGTTTCTCT
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44855582 10 -  45163003 AAGTTTCTCT
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                18219 10 +    109198 AAGTTTCTCT
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       6536 10 +     12214 TAGTTTCTCT
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15671756 10 -  43202129 AAGTTTCTCT
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        3673 10 +     34089 AAGTTTCTCT
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              3614 10 -     60842 AAGTTTCTCT
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              3709 10 +     67014 AAGTTTCTCT
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              3687 10 +     60816 AAGTTTCTCT
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 3624 10 -     76454 AAGTTTCTCT
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17340350 10 -  30362882 AAGTTTCTCT
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         19709 10 -     62485 AAGTTTCTCT
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   30303  8 -    114521 AG--TTTTCT
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        2409 10 +     15331 AAGTTTCTCT
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       7806 10 +     20762 AAGTTTCTCT
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         117804 10 +    130994 AAGTTTCTCT
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           36595 10 +     46263 AAGTTTCTCT
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     29709 10 +     42640 AAGTTTCTCT
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        12753 10 +     30600 AAGTTTCTCT
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   98606  9 -    120886 AAG-ACCTCT
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 I 3
s Solenodon_paradoxus.SolPar_flattened_line_1012            16923 10 +    739146 AAGTTTCTCA
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17749543 10 -  27805282 AAGTATCTCT
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2238798  8 +   2842873 --GTGTCTCT
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             233331 10 -    276980 AAGTTTCACT
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            25884 10 +     62062 AAGTTTCTCT
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189270806 10 + 218635234 atgttTCCCT
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        13967 10 -  13920577 AAGTTTCTCT
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               4975 10 -      6213 AAGTTTCTCT
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               13670 10 +     45698 GGATTTTTCT
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      805672 10 +   1148477 AACTTTCTCT
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  56329 10 +     99546 AACTTTCTCT
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               25491 10 +     42269 AAATTTCTCT
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               58807 10 +     65473 AAATTTCTCT
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194006813 10 - 194193292 AAGTTTCTCT
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             38318 10 -     47444 AAGTGTCTCT
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  4533 10 +      6782 AAACTTTTCT
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  134817 10 -    259118 GAGTTTCTCT
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        25916 10 +     38948 AAGTTTCTCT
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   19643 10 -     32910 AAGTTTCTCT
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      1030 10 -     12939 AAGTTTCTCT
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                        965 10 -     14244 AAGTTTCTCT
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           42363 10 -     54611 AAGTTTCTCT
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                         169 10 -     11566 AAGTTTCTCT
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     2341 10 -     15592 AAGTTTCTCT
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                           998 10 +     14371 AAGTTTCTCT
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  50750 10 +     51589 AAGTTTCTCT
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       13931 10 +     14732 AAGTTTCTCT
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       4403 10 -     28054 AAGTTTCTCT
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44659203 10 -  44834318 AAGTTTCTCT
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       1506 10 +     13828 AAGTTTCTCT
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   4115 10 +     90398 TGATTTCTCT
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16081521 10 +  31416278 gagtttccct
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69312371 10 -  96451834 TAGTTCCTCT
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_139357                   827 10 +      2103 AAGTTTTCCT
i Uropsilus_gracilis.UroGra_scaffold_139357             C 0 C 0
s Ursus_maritimus.KK498671.1                              6513125  6 +  28682327 AATTTT----
i Ursus_maritimus.KK498671.1                            C 0 I 3
s Varecia_rubra.k141_432109                                  4288 10 -     20643 AAGTTTCTCT
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             23829 10 -     33872 AAGTTTCTCT
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1523609 10 -   2331223 AAGTTTTCCT
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                136531 10 -    281493 AAGTTTTGTT
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       125901 10 -    134049 AAATGTCTCC
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        212601 10 -    227762 AAGTTTCACT
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           5868 10 -      8775 TAGTTCTTCT
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Dinomys_branickii.DinBra_scaffold_1996                   156356 54 +    228994 I
e Manis_pentadactyla.KN017078.1                             35015 87 +     58827 I
e Manis_javanica.JSZB01003966.1                            144940 87 +    252755 I
e Elephantulus_edwardii.JH947210.1                        7804622 10712 +  15467074 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     14107 296 -     20485 I
e Hylobates_pileatus_a.tarseq_592                             33311  5 -     60944 I
e Tupaia_tana.TupTan_flattened_line_68454                    4046  0 +     13056 C
e Tupaia_chinensis.KB320831.1                             2791778  0 -   3938065 C
e Nomascus_siki_b.tarseq_80                             24175  0 -  18771707 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               10963  7 +    209709 GA--GA--A---G------A
s Acinonyx_jubatus.LLWD01000356.1                         2032314 10 +   3721120 G----Agga---a---ttgc
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    111316  3 -    189883 GA--G---------------
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 I 1
s Ailurus_fulgens.LNAC01000003.1                          7092808 10 -  16596857 G----AGGA---AA---TGC
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   11982  3 -     22067 GA--G---------------
i Allactaga_bullata.AllBul_scaffold_70162               C 0 I 1
s Allenopithecus_nigroviridis.k141_2469532                    322  7 -     60446 GA--GA--A---G------A
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         1041  7 -     29318 GA--GA--A---G------A
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_21674                           1258  7 -      1421 GA--GA--A---G------A
i Allochrocebus_preussi.k141_21674                      C 0 C 0
s Allochrocebus_solatus.k141_371672                           935  7 -     80423 GA--GA--A---G------A
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             9228  7 -     18050 GA--GA--A---G------A
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                 10318  7 -     11521 GA--GA--A---G------A
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              9905  7 -     21359 GA--GA--A---G------A
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_298055                                 1201  7 +      1823 GA--GA--A---G------A
i Alouatta_juara.k141_298055                            C 0 C 0
s Alouatta_macconnelli.k141_1331706                          9201  7 -     10438 GA--GA--A---G------A
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            5857  7 +      7047 GA--GA--A---G------A
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             9137  7 +     10410 GA--GA--A---G------A
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            2947  7 -      4927 GA--GA--A---G------A
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             5876  7 +      6429 GA--GA--A---G------A
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3519087 10 +   4113121 G----C--A---GAA-GTAC
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      389257 10 -    631301 G----A--G---GAA-GTGC
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            29670 10 +     33004 G----C--A---GAA-GTAC
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 61587  7 +     78111 GA--GA--G---G------A
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            4528  7 +     22701 GA--GA--G---G------A
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5748485  7 +   9889416 GA--GA--G---G------A
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             5070  7 -    104377 GA--GA--G---G------A
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               5076  7 +     23246 GA--GA--G---G------A
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     2737  7 +      5067 AA--GA--A---G------C
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_1161114                      17257  7 +     17483 GA--GA--A---G------C
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 7659 10 -     29036 G----A--G---GAA-GCAC
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9538333  7 +  39197703 GA--GA--A---G------A
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             59604  7 +     85812 GA--GA--A---G------A
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                10616  7 +     89302 GA--GA--A---G------A
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             15121  7 -     58268 GA--GA--A---G------A
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             63112  7 +    119057 GA--GA--A---G------A
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               5081  7 -     25888 GA--GA--A---G------A
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 5711  7 -     16375 GA--GA--A---G------A
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              2031  7 +      2719 GA--GA--A---G------A
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26379100 10 +  51448160 G----A--G---AAA-GTAC
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        4332 10 -     13118 G----A--G---AAA-GTAC
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   42150 10 -     72089 G----C--A---GAA-GTAC
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6558461 10 +   6870073 G----C--A---GAA-GTAC
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138138687 10 - 161108492 G----C--A---GAA-GTAC
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     571074 10 -    998990 G----C--A---GAA-GTAC
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136294420 10 - 158972876 G----C--A---GAA-GTAC
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1230187 10 -   1914593 G----C--A---GAA-GTAT
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               112974  7 -    171031 GA--GA--A---G------A
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 12002  7 +    125063 GA--GA--A---G------A
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                14047  7 -    216513 GA--GA--A---G------A
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        6587  7 -    134917 GA--GA--A---G------A
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3218512 10 -   8989139 G----A--G---GAAA-TGC
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           396217 10 -  15254737 G----A--G---GAAA-TGC
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2971950 10 +   6889770 G----A--G---GAAA-TGC
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11517486 10 +  39901454 G----AGGG---AA---TAC
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   12511 10 +     87036 G----AGGG---AA---TAC
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11264151 10 -  35597290 G----AGGG---AA---TAC
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11086683 10 +  39895921 G----AGGG---AA---TAC
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16453702 10 -  44759192 G----AGGG---AA---TAC
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21324163 10 + 157394656 G----C--A---GAA-GTAC
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135705390 10 - 157403528 G----C--A---GAA-GTAC
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_979108                   992  6 -      1248 GA--GA--A---G-------
i Capromys_pilorides.CapPil_scaffold_979108             C 0 C 0
s Carlito_syrichta.NW_007248099.1                          308017  7 +    345090 GA--GA--A---G------A
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               58458 10 +     67245 G----A--G---GAA-GTGC
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   29681  7 +     33760 GA--GA--A---G------A
i Castor_canadensis.CasCan_scaffold_47037               C 0 I 2
s Catagonus_wagneri.CatWag_scaffold_1305                   157726 10 -    276539 G----A--G---AAA-GTAT
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15785624  6 -  24422027 GA--AA--A---G-------
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15797558  6 -  24440124 GA--GA--A---G-------
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       175749  6 +    436027 GA--GA--A---G-------
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18889817  7 -  29618158 GA--GA--A---G------A
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 7361  7 -     26817 GA--GA--A---G------A
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                11601  7 +     25043 GA--GA--A---G------A
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         7050  7 +     21754 GA--GA--A---G------A
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4362826 10 +   7569818 G----AGGA---AA---TGC
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         2578 10 -      9338 G----AGGA---AA---TGC
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6554257  7 +   6739814 GA--GA--A---G------A
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      25734  7 +     60454 GA--GA--A---G------A
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                           939  7 -     21101 GA--GA--A---G------A
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         58249  7 -    107033 GA--GA--A---G------A
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        1141  7 -     17608 GA--GA--A---G------A
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          28636  7 +     30494 GA--GA--A---G------A
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          57482  7 -     59240 GA--GA--A---G------A
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          1183  7 +     16677 GA--GA--A---G------A
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           23341  7 +     35983 GA--GA--A---G------A
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11989869  7 +  12117833 GA--GA--A---G------A
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46476627  7 +  46592721 GA--GA--A---G------A
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      40178  7 -     45581 GA--GA--A---G------A
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       1184  7 +     35577 GA--GA--A---G------A
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                         960  7 -     25661 GA--GA--A---G------A
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                         938  7 -     17744 GA--GA--A---G------A
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        20547  7 +     37128 GA--GA--A---G------A
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           1772 10 -      6963 GA--GA--A---G---GTAC
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           58008  7 -     68416 GA--GA--A---G------A
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            7051  7 +     13308 GA--GA--A---G------A
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             4617  7 -     18223 GA--GA--A---G------A
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             21640  7 +     25473 GA--GA--A---G------A
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           40675  7 +     57117 GA--GA--A---G------A
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          45354  7 +     54541 GA--GA--A---G------A
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15960769  9 +  43084221 GA--GA--CATTG-------
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         70176  7 +    196370 GA--GA--A---G------A
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          14356  7 +     40510 GA--GA--A---G------A
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15138100  7 -  15256731 GA--GA--A---G------A
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      33147  7 -     53260 GA--GA--A---G------A
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101143711  7 + 101219884 GA--GA--A---G------A
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                15444 10 -     21363 GA--GA--A---GA---TAC
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           760752 10 +    964067 GA--GA--A---GA---TAC
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10885477  7 +  10971483 GA--GA--A---G------A
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147663641  7 + 156195979 GA--GA--A---G------A
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            15626  7 +     23629 GA--GA--A---G------A
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60611568 10 +  78930452 A----A--G---AAA-GTAT
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         38564 10 -     40477 G----A--A---GAA-GAGC
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             18593  1 -     19186 -------------------A
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 277284  3 -    399297 GA--G---------------
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 I 1
s Cricetulus_griseus.LT883672.1                          53027965  3 +  72327488 GA--G---------------
i Cricetulus_griseus.LT883672.1                         C 0 I 1
s Cryptoprocta_ferox.CryFer_flattened_line_19014            50329  6 -     70449 G----AGGA---A-------
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 I 4
s Ctenodactylus_gundi.CteGun_scaffold_447                  207184  7 -    956709 AA--GA--AA--A-------
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 I 1
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 29773  6 -     67205 GA--GA--A---G-------
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                16780  6 +     26546 GA--GA--A---T-------
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             57872  6 -    236241 GA--GA--A---G-------
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          182607 10 -   6883506 AA--GA--A---G---GTAC
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16843867  7 +  31942871 GA--GA--A---G------A
i Daubentonia_madagascariensis.ctg11                    I 8 C 0
s Delphinapterus_leucas.KZ290064.1                       80035779 10 -  96802777 G----A--G---AAA-GTAC
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18697767 10 -  18957592 G----A--G---GAA-GTGC
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 321473 10 +    993696 G----AGGA---AA---TGC
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   2125 10 +    151128 G----AGGA---AA---TGC
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dipodomys_ordii.KN672545.1                              3655158  7 +   4240102 AA--GC--A---G------A
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 26791  7 +     28912 AA--GC--C---G------A
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                35119  6 -     73477 GA--GA--A---G-------
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Eidolon_helvum.KE772537.1                                 11138 10 +     24177 G----A--G---GAA-GTGT
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1490437 10 +   1727528 G----T--A---GAA-GTAC
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        238526  3 -    369425 GA--G---------------
i Ellobius_lutescens.LOEQ01003611.1                     C 0 I 1
s Ellobius_talpinus.LOJH01090055.1                           5636  3 -      7838 GA--G---------------
i Ellobius_talpinus.LOJH01090055.1                      C 0 I 1
s Enhydra_lutris.KZ291749.1                              85870110 10 +  99434291 G----AGGA---A---acgc
i Enhydra_lutris.KZ291749.1                             C 0 I 207
s Eptesicus_fuscus.JH977687.1                             4703165 10 +   6522550 G----A--G---GAA-GTGC
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5851890 10 -   7175178 G----AGGA---AA---TGC
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13350393 10 +  41866177 G----AGGA---AA---TGC
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          11883 10 +     92910 G----AGGA---AA---TGC
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11531432  9 +  16010500 G----G--G---GTA-GT-A
i Erinaceus_europaeus.JH835290.1                        C 0 I 1
s Erythrocebus_patas.Contig8                             48770278  7 -  48907691 GA--GA--A---G------C
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          313985 10 +    330699 G----A--G---AAA-GTAC
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             60439 10 +     89355 G----A--G---AAA-GTAC
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              4052  7 +     13586 GA--GA--A---G------A
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               3989  7 -      6809 GA--GA--A---G------A
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            10462  7 +     36558 GA--GA--A---G------A
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             6781  7 +     60246 GA--GA--A---G------A
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                10260  7 +    109717 GA--GA--A---G------A
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               14643  7 +     16540 GA--GA--A---G------A
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                14916  7 +     27497 GA--GA--A---G------A
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           17373  7 +     26808 GA--GA--A---G------A
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                32108  7 +     46535 GA--GA--A---G------A
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              14830  7 -     29447 GA--GA--A---G------A
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129891290 10 - 159252932 G----Agga---a---ttgc
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129278362 10 - 158578461 G----Agga---a---ttgc
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 19497 10 +     52776 G----AGGA---A---TTGC
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13891725  2 -  19261668 GA------------------
i Fukomys_damarensis.KN123630.1                         C 0 I 1
s Galago_moholi.ctg555                                     209961  7 -    847004 GA--GA--A---G------C
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           12340  7 -     43889 GA--GA--A---G------C
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           9408  7 +     27357 GA--GA--A---G------A
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               155277  7 +    324696 GA--AA--A---G------A
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    180237 10 -    189561 g----c--a---gAA-GTAC
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           11892  7 -     18683 GA--GA--A---G------A
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               4348  7 -     14630 GA--GA--A---G------A
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119651447  7 - 195582420 GA--GA--A---G------A
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   76622  7 +    118900 GA--GA--A---G------A
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                          853  7 +     10286 GA--GA--A---G------A
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_1254239                            9029  7 +      9690 GA--GA--A---G------C
i Hapalemur_gilberti.k141_1254239                       C 0 C 0
s Hapalemur_griseus.k141_1387522                             4658  7 +     56096 GA--GA--A---G------A
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        27908  7 -     42470 GA--GA--A---G------A
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        44532  7 -     54384 GA--GA--A---G------A
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              15537 10 +     53719 G----AGGA---A---TTCC
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                26435 10 -     91191 G----C--A---GAA-GTAC
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2550101  6 +  31725842 GA--GA--A---G-------
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               56541  7 +     73687 CA--GT--A---G------G
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              146060 10 +    277961 G----A--G---GAA-GTAC
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      277349 10 -    477199 G----A--G---GAAA-TGC
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              6508 10 -      9143 G----A--G---GAAA-TGC
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      3749  7 -   7690867 GA--GA--A---G------A
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 14631 10 -     67322 G----AGGA---A---CTGC
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           17998  6 -    119109 GA--GA--A---G-------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              4175  7 +      5897 GA--GA--A---G------A
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_624065                               1039  7 +      2112 GA--GA--A---G------A
i Hylobates_agilis.k141_624065                          C 0 C 0
s Hylobates_klossii.k141_466549                             10615  7 +     11537 GA--GA--A---G------A
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14623720  7 -  25970782 GA--GA--A---G------A
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                             976  7 -      2977 GA--GA--A---G------A
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     5174  6 +     22540 GA--GA--A---G-------
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7124886  7 +  13083262 TA--GA--A---G------C
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_4418183                                    472  7 -      1457 GA--GA--A---G------C
i Indri_indri.k141_4418183                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               7979 10 +     17520 G----A--G---AAA-GTAC
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8564713  3 +  11848649 GA--G---------------
i Jaculus_jaculus.JH725517.1                            C 0 I 1
s Kogia_breviceps.KogBre_flattened_line_35920               22599 10 +     37189 G----A--G---AAA-GTAC
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          49197  7 -    147782 GA--GA--A---G------A
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   113012 10 -    115756 G----A--G---AAA-GTTA
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258406213  7 - 285822530 GA--GA--A---G------A
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        22965  7 +     39228 GA--GA--A---G------A
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            52340  7 +     63517 GA--GA--A---T------T
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        77590  7 +    116806 GA--GA--A---G------A
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     30604  7 -     33031 GA--GA--A---G------A
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3084331 10 -   3498232 G----AGGA---A---GTGC
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    11967  7 +     22452 GA--GA--A---G------T
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            134932 10 +   3060487 G----A--G---AAA-CTAC
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19247346  7 +  19376315 GA--GA--A---G------A
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            9725  7 +     84689 GA--GA--A---G------C
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3777474  7 +   6799190 GA--GA--A---G------C
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20591069  7 -  62548349 GA--GG--G---G------T
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11086139 10 +  39895028 G----AGGG---AA---TAC
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             19086  7 +     74745 GA--GA--A---G------A
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12705542  7 +  12821369 GA--GA--A---G------A
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                1187  7 -      3136 GA--GA--A---G------A
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           46004  7 +     63263 GA--GA--A---G------A
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                  707  7 -      2568 GA--GA--A---G------A
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 1293  7 -      7381 GA--GA--A---G------A
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  44511  7 -     79256 GA--GA--A---G------A
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196034619  7 + 196197964 GA--GA--A---G------A
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11444786  7 +  11645122 GA--GA--A---G------A
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   3458  7 -     46448 GA--GA--A---G------A
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                1130  7 -     13212 GA--GA--A---G------A
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 14810  7 -     55006 GA--GA--A---G------A
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43839928  7 +  43892939 GA--GA--A---G------A
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               16097  7 -     24607 GA--GA--A---G------A
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               3463  7 -     27140 GA--GA--A---G------A
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                700552 10 +    802869 G----A--G---GAA-GTGC
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43436505  7 -  43563597 GA--GA--A---G------A
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4449331  7 -   4543643 GA--GA--A---G------A
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36872725  7 +  64221397 TA--GA--A---G------C
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       63348 11 -    234502 G----A--A---AAAAGTGC
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_146202             924 10 -      1999 G----AGGA---AA-CG--C
i Mellivora_capensis.MelCap_flattened_line_146202       C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               11442  3 +     15977 GA--G---------------
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 I 1
s Mesocricetus_auratus.KB708139.1                         1045706  3 -  26018355 GA--G---------------
i Mesocricetus_auratus.KB708139.1                       C 0 I 1
s Microcebus_murinus.CM007691.1                          16509218  7 +  47401472 AA--GA--A---G------A
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               21643 10 -     32043 G----A--G---GAA-GTGC
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22818816  3 -  98408828 GA--G---------------
i Microtus_ochrogaster.CM001673.1                       C 0 I 1
s Miniopterus_natalensis.LDJU01000022.1                   8208637 10 +  10048721 G----A--G---GAA-GTGC
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            33294 10 +     45743 G----A--G---GAA-GTGC
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         1058  7 +     29742 GA--GA--A---G------A
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         9839 10 -    104932 G----AGGA---A---GTGC
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     4608  7 +      8497 AA--GA--A---G------A
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 145367 10 +    154973 G----A--G---AAA-GTAC
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                160153 10 +    265003 G----A--G---GAA-GTGC
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 3538 10 -      4346 G----C--A---GAA-GTAC
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  143228 10 -    168139 G----AGGA---A---TTGC
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          18525 10 -    100666 G----A--G---GAA-GTGC
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70765313  3 +  92629107 GA--G---------------
i Mus_caroli.LT608236.1                                 C 0 I 1
s Mus_musculus.chr16                                     75488350  3 +  98207768 GA--G---------------
i Mus_musculus.chr16                                    C 0 I 1
s Mus_pahari.LT608305.1                                  67554586  3 +  89017189 GA--G---------------
i Mus_pahari.LT608305.1                                 C 0 I 1
s Mus_spretus.CM004110.1                                 74329529  3 +  97876770 GA--G---------------
i Mus_spretus.CM004110.1                                C 0 I 1
s Muscardinus_avellanarius.MusAve_scaffold_9643             10603  7 +     98495 GA--GA--A---A------A
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4422496 10 -  28371801 G----AGGA---AA-CG--C
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     89053  6 -    117718 GA--GA--A---T-------
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               966830 10 +   8389877 G----A--G---GAA-GTGC
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5018506 10 +   6462685 G----A--G---GAA-GTGC
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3464410 10 -   3747815 G----A--G---GAA-GTGC
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         9625 10 +     66751 G----A--G---GAA-GTGC
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             4005 10 -      8794 GA--GA--C---G---CTGC
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            117173  3 +    362372 GA--G---------------
i Nannospalax_galili.KL201303.1                         C 0 I 1
s Nasalis_larvatus.k141_153429                               7560  7 +     48152 GA--GA--A---G------A
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4483231 10 -  14209539 G----AGGA---A---GTGC
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3949981 10 -   4490290 G----A--G---AAA-GTAC
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  48257 10 +     94413 G----A--G---AA-TGTGC
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_302224                            1017  7 +      1516 GA--GA--A---G------A
i Nomascus_annamensis.k141_302224                       C 0 C 0
s Nomascus_concolor.k141_226614                               277  7 -      5092 GA--GA--A---G------A
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_642452                            1060  7 +      2851 GA--GA--A---G------A
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_a.k141_595747                                  1698  7 +      4512 GA--GA--A---G------A
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                29168 10 +   3668941 G----AGGG---AA---TAC
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65566159  7 -  95554990 GA--GA--A---G------C
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            2888  7 +      6470 GA--GA--A---G------C
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65668497  7 +  89412551 GA--GA--A---G------C
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4995052  7 -  23139505 GA--CG--A---G------T
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3684598  6 +  10294119 GA--GA--A---G-------
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             677876 10 -   3126709 G----AGGA---A---GTGC
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1078667 10 +   1425656 G----T--A---GAA-GTAC
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         35963 10 +     78940 G----C--A---GAA-GTAC
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  124072  3 +    145789 GA--G---------------
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 I 1
s Onychomys_torridus.OnyTor_scaffold_12578                  35843  3 +     62360 GA--G---------------
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 I 1
s Orcinus_orca.KB316965.1                                 7223664 10 -   7562323 G----A--G---AAA-GTAC
i Orcinus_orca.KB316965.1                               C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141874991  7 + 163896628 GA--GA--A---G------T
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      306456 10 -    505867 G----AGGA---AA---TAC
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       38057  7 +     38679 GA--GA--A---G------C
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18007485  7 -  38779656 GA--GA--A---G------C
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134076229 10 - 275406953 G----C--A---GAA-GTAC
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      77443 10 +    140051 G----C--A---GAA-GTAC
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127573708  7 - 205426864 GA--GA--A---G------A
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120150861  7 - 196562556 GA--GA--A---G------A
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  32691 10 +    295523 G----AGGA---A---TTGC
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3636425 10 +  18214204 G----Agga---a---ttgc
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5026072 10 -   6340057 G----Agga---a---ttgc
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1065090 10 -   1292953 G----C--A---GAA-GTAC
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188155296  7 - 188283584 GA--GA--A---G------A
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             3613  7 +      5367 GA--GA--A---G------A
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47512684  7 +  47705337 GA--GA--A---G------A
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 66662  7 -    104429 GA--GA--A---G------A
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    5194  7 +     14967 GA--GA--A---G------A
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 1055  7 -      7628 GA--GA--A---G------A
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    114008 10 -    135482 G----AGGA---A---TTGC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           4471  7 -     23713 GA--GA--A---G------C
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            23780  7 -     27972 GA--GA--A---G------C
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      42631  7 -     45160 AA--GA--A---T------A
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4949111  3 -   8017169 GA--G---------------
i Peromyscus_maniculatus.KI615518.1                     I 79 I 1
s Petromus_typicus.PetTyp_scaffold_33007                    11533  6 -     36578 GA--GA--A---G-------
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            120281 10 -    122454 G----A--G---AAA-GTAC
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1987485                           1082  7 -      5908 GA--GA--A---G------C
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       1702  7 -     17985 GA--GA--A---G------C
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            1069  7 +      7694 GA--GA--A---G------C
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26739547  7 +  26888534 GA--GA--A---G------C
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            96452 10 +    112873 G----A--G---GAA-GTGG
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             42679  7 -     61926 GA--GA--A---G------A
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        24110  7 +     78826 GA--GA--A---G------A
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              8059  7 -     15800 GA--GA--A---G------A
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        11257  7 -     16101 GA--GA--A---G------A
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          4566  7 +      9673 GA--GA--A---G------A
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13473562  7 -  19735023 GA--GA--A---G------A
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           12468  7 -     31692 GA--GA--A---G------A
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           4349 10 +     21690 G----A--G---AAA-GTAC
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       21903  7 +     44506 GA--GA--A---G------A
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        22115  7 +     67491 GA--GA--A---G------A
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      12354  7 -     98129 GA--GA--A---G------A
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     21954  7 +    147771 GA--GA--A---G------A
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        22209  7 -     23762 AA--GA--A---G------A
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          2675  7 -     55515 GA--GA--A---G------A
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         22028  7 +    152463 GA--GA--A---G------A
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      8788  7 +      8943 GA--GA--A---G------A
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                         11750  7 +    134592 GA--GA--A---G------A
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          22338  7 -     75465 GA--GA--A---G------A
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              186233  7 -    373494 GA--GA--A---G------C
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19806881  7 +  19899266 GA--GA--A---G------C
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               4804  7 -     15069 GA--GA--A---G------A
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              4938  7 +     14865 GA--GA--A---G------A
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                76405  7 +     78963 CA--GT--A---G------G
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6847594  7 +  12164890 GA--GA--A---G------A
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    666813  7 -   2312742 GA--GA--A---G------A
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         2640  7 +     11805 GA--AA--A---G------A
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           41976  7 +     52369 GA--GA--A---G------A
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         34366  7 -     44753 GA--GA--A---G------A
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            16286  7 +     27322 GA--GA--A---G------A
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       15922  7 -     53241 GA--GA--A---G------A
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         38194  7 -     48185 GA--GA--A---G------A
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           32980  3 +     77221 GA--G---------------
i Psammomys_obesus.NESX01026517.1                       C 0 I 1
s Pteronotus_parnellii.KE867983.1                            2821 10 -     27784 G----A--G---GAA-GTAC
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        244593 10 -    344369 G----AGGA---AA-CG--C
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 I 208
s Pteropus_alecto.KB031157.1                             13244939 10 -  17261082 g----a--g---gAA-GTGC
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             602889 10 -   3946241 g----a--g---gAA-GTGC
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131532655 10 - 161321710 G----Agga---a---ttgc
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             28922  7 +     56732 GA--GA--A---G------A
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6805413  7 +   6970761 GA--GA--A---G------A
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             4807  7 +     18040 GA--GA--A---G------A
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                14744 10 +     68503 G----T--A---GAA-GTAC
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13914355  5 +  90463843 GAGAG---------------
i Rattus_norvegicus.chr11                               C 0 I 1
s Rhinolophus_sinicus.LVEH01000179.1                      1786751 10 +   2252614 G----A--G---GTA-GTGA
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_1391695                           1035  7 -      1866 GA--GA--A---G------A
i Rhinopithecus_bieti.k119_1391695                      C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206376692  7 - 206558726 GA--GA--A---G------A
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44855592  7 -  45163003 GA--GA--A---G------A
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                18229 10 +    109198 G----A--G---GAA-GTGA
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       6546 10 +     12214 G----C--A---GAA-GTAC
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15671766  7 -  43202129 GA--GA--A---G------A
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        3683  7 +     34089 GA--GA--A---G------A
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              3624  7 -     60842 GA--GA--A---G------A
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              3719  7 +     67014 GA--GA--A---G------A
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              3697  7 +     60816 GA--GA--A---G------A
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 3634  7 -     76454 GA--GA--A---G------A
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17340360  7 -  30362882 GA--GA--A---G------A
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         19719  7 -     62485 GA--GA--A---G------A
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   30311 10 -    114521 A----A--G---AAA-GTAC
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        2419  7 +     15331 GA--GA--A---G------A
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       7816  7 +     20762 GA--GA--A---G------A
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         117814  7 +    130994 GA--GA--A---G------A
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           36605  7 +     46263 GA--GA--A---G------A
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     29719  7 +     42640 GA--GA--A---G------A
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        12763  7 +     30600 GA--GA--A---G------A
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   98618  1 -    120886 -------------------A
i Sigmodon_hispidus.SigHis_scaffold_11332               I 3 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            16933  8 +    739146 G----A--A---GA---TTA
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17749553  8 -  27805282 G----A--G---G---TTTA
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2238806  7 +   2842873 TA--GA--A---G------C
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             233341  8 -    276980 G----AGGA---AA-----C
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            25894 10 +     62062 G----AGGA---A---TTCC
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189270816 10 + 218635234 G----A--A---GAA-GTAT
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        13977  7 -  13920577 GA--GA--A---G------A
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               4985  3 -      6213 G----A--A-----------
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 I 6
s Tamandua_tetradactyla.TamTet_scaffold_26877               13680 10 +     45698 GA--GA--A---G---GTGC
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      805682 10 +   1148477 G----AGGA---AA---TGC
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  56339 10 +     99546 G----AGGA---AA---TGC
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               25501  7 +     42269 GA--GA--A---G------A
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               58817  7 +     65473 GA--GA--A---G------A
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194006823  7 - 194193292 GA--GA--A---G------A
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             38328  6 -     47444 GA--AA--A---G-------
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  4543 10 +      6782 GA--GA--A---G---GTAC
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  134827 10 -    259118 G----A--G---GAA-GTGC
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        25926  7 +     38948 GA--GA--A---G------A
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   19653  7 -     32910 GA--GA--A---G------A
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      1040  7 -     12939 GA--GA--A---G------A
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                        975  7 -     14244 GA--GA--A---G------A
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           42373  7 -     54611 GA--GA--A---G------A
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                         179  7 -     11566 GA--GA--A---G------A
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     2351  7 -     15592 GA--GA--A---G------A
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          1008  7 +     14371 GA--GA--A---G------A
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  50760  7 +     51589 GA--GA--A---G------A
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       13941  7 +     14732 GA--GA--A---G------A
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       4413  7 -     28054 GA--GA--A---G------A
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44659213  7 -  44834318 GA--GA--A---G------A
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       1516  7 +     13828 GA--GA--A---G------A
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   4125 10 +     90398 G----A--A---GAA-GTGC
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16081531  7 +  31416278 ga--gg--a---g------g
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2791778  1 -   3938065 -------------------A
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    4046  1 +     13056 -------------------A
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69312381 10 -  96451834 G----A--G---AAA-GTAC
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_139357                   837 10 +      2103 A----A--A---GAAA-TAG
i Uropsilus_gracilis.UroGra_scaffold_139357             C 0 C 0
s Varecia_rubra.k141_432109                                  4298  7 -     20643 GA--GA--A---G------C
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             23839  7 -     33872 GA--GA--A---G------C
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1523619 10 -   2331223 G----A--G---GAAA-TGC
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                136541 10 -    281493 G----AGGG---AA---TAC
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       125911  7 -    134049 AA--GA--A---G------A
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        212611 10 -    227762 G----AGGA---A---GTGC
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           5878  4 -      8775 G----A--G---A-------
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 I 4
e Dinomys_branickii.DinBra_scaffold_1996                   156356 54 +    228994 I
e Ursus_maritimus.KK498671.1                              6513131  3 +  28682327 I
e Orycteropus_afer.OryAfe_flattened_line_13509              43378 16 -     66828 I
e Microgale_talazaci.MicTal_scaffold_34660                  30638 409 -     48017 I
e Manis_pentadactyla.KN017078.1                             35015 87 +     58827 I
e Manis_javanica.JSZB01003966.1                            144940 87 +    252755 I
e Elephantulus_edwardii.JH947210.1                        7804622 10712 +  15467074 I
e Echinops_telfairi.JH980316.1                           22994192 422 -  44670279 I
e Ailuropoda_melanoleuca.LNAT01000321.1                  10655655  3 +  23371972 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     14107 296 -     20485 I
e Hylobates_pileatus_a.tarseq_592                             33311  5 -     60944 I
e Nomascus_siki_b.tarseq_80                             24175  0 -  18771707 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               10970 5 +    209709 AGCAG
s Acinonyx_jubatus.LLWD01000356.1                         2032324 2 +   3721120 at---
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    111320 2 -    189883 TC---
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 1 I 3
s Ailurus_fulgens.LNAC01000003.1                          7092818 2 -  16596857 AG---
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   11986 2 -     22067 AG---
i Allactaga_bullata.AllBul_scaffold_70162               I 1 I 3
s Allenopithecus_nigroviridis.k141_2469532                    329 5 -     60446 AGCAG
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         1048 5 -     29318 AGCAG
i Allochrocebus_lhoesti.k141_3566948                    C 0 I 1
s Allochrocebus_preussi.k141_21674                           1265 5 -      1421 AGCAG
i Allochrocebus_preussi.k141_21674                      C 0 n 0
s Allochrocebus_solatus.k141_371672                           942 5 -     80423 AGCAG
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             9235 5 -     18050 AGCAG
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                 10325 5 -     11521 AGCAG
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              9912 5 -     21359 AGCAG
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_298055                                 1208 5 +      1823 AGCAG
i Alouatta_juara.k141_298055                            C 0 C 0
s Alouatta_macconnelli.k141_1331706                          9208 5 -     10438 AGCAG
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            5864 5 +      7047 AGCAG
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             9144 5 +     10410 AGCAG
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            2954 5 -      4927 AGCAG
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             5883 5 +      6429 AGCAG
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3519097 2 +   4113121 AG---
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      389267 2 -    631301 AG---
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            29680 2 +     33004 AG---
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 61594 5 +     78111 AGCAG
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            4535 5 +     22701 AGCAG
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5748492 5 +   9889416 AGCAG
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             5077 5 -    104377 AGCAG
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               5083 5 +     23246 AGCAG
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     2744 2 +      5067 AG---
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 I 3
s Arctocebus_calabarensis.k141_1161114                      17264 5 +     17483 AGCAG
i Arctocebus_calabarensis.k141_1161114                  C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 7669 2 -     29036 AG---
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9538340 5 +  39197703 AGCAG
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             59611 5 +     85812 AGCAG
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                10623 5 +     89302 AGCAG
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             15128 5 -     58268 AGCAG
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             63119 5 +    119057 AGCAG
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               5088 5 -     25888 AGCAG
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 5718 5 -     16375 AGCAG
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              2038 5 +      2719 AGCAG
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26379110 2 +  51448160 AG---
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        4342 2 -     13118 AG---
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   42160 2 -     72089 AG---
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6558471 2 +   6870073 AG---
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138138697 2 - 161108492 AG---
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     571084 2 -    998990 AG---
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136294430 2 - 158972876 AG---
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1230197 2 -   1914593 AG---
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               112981 5 -    171031 AGCAG
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 12009 5 +    125063 AGCAG
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                14054 5 -    216513 AGCAG
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        6594 5 -    134917 AGCAG
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3218522 2 -   8989139 TG---
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           396227 2 -  15254737 TG---
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2971960 2 +   6889770 TG---
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11517496 2 +  39901454 AG---
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   12521 2 +     87036 AG---
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11264161 2 -  35597290 AG---
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11086693 2 +  39895921 AG---
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16453712 2 -  44759192 AG---
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21324173 2 + 157394656 AG---
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135705400 2 - 157403528 AG---
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          308024 5 +    345090 AGCAA
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               58468 2 +     67245 AG---
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   157736 2 -    276539 AG---
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18889824 5 -  29618158 AGCGG
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 7368 5 -     26817 AGCGG
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                11608 5 +     25043 AGCGG
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         7057 5 +     21754 AGCAA
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4362836 2 +   7569818 AT---
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         2588 2 -      9338 AT---
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6554264 5 +   6739814 AGCAG
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      25741 5 +     60454 AGCAG
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                           946 5 -     21101 AGCAG
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         58256 5 -    107033 AGCAG
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        1148 5 -     17608 AGCAG
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          28643 5 +     30494 AGCAG
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          57489 5 -     59240 AGCAG
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          1190 5 +     16677 AGCAG
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           23348 5 +     35983 AGCAG
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11989876 5 +  12117833 AGCAG
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46476634 5 +  46592721 AGCAG
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      40185 5 -     45581 AGCAG
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       1191 5 +     35577 AGCAG
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                         967 5 -     25661 AGCAG
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                         945 5 -     17744 AGCAG
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        20554 5 +     37128 AGCAG
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           1782 2 -      6963 AG---
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           58015 5 -     68416 AACAG
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            7058 5 +     13308 AACAG
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             4624 5 -     18223 AGCAT
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             21647 5 +     25473 AGCAT
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           40682 5 +     57117 AGCAT
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          45361 5 +     54541 AGCAT
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chiropotes_israelita.k141_1189915                         70183 5 +    196370 AGCAG
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          14363 5 +     40510 AGCAG
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15138107 5 -  15256731 AGCAG
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      33154 5 -     53260 AGCAG
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101143718 5 + 101219884 AGCAG
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                15454 2 -     21363 AG---
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           760762 2 +    964067 AG---
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10885484 5 +  10971483 AGCAG
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147663648 5 + 156195979 AGCAG
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            15633 5 +     23629 AGCAG
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60611578 2 +  78930452 AG---
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         38574 2 -     40477 AG---
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 277288 2 -    399297 TA---
i Cricetomys_gambianus.CriGam_scaffold_949              I 1 I 3
s Cricetulus_griseus.LT883672.1                          53027969 2 +  72327488 TA---
i Cricetulus_griseus.LT883672.1                         I 1 I 3
s Crocidura_indochinensis.CroInd_scaffold_38409             18594 1 -     19186 -A---
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            50339 2 -     70449 AG---
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 4 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  207192 2 -    956709 AG---
i Ctenodactylus_gundi.CteGun_scaffold_447               I 1 I 3
s Dasypus_novemcinctus.JH568778.1                          182617 2 -   6883506 AG---
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16843874 5 +  31942871 AGCAG
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80035789 2 -  96802777 AG---
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18697777 2 -  18957592 AG---
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 321483 2 +    993696 AT---
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   2135 2 +    151128 AT---
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dipodomys_ordii.KN672545.1                              3655165 2 +   4240102 AT---
i Dipodomys_ordii.KN672545.1                            C 0 I 3
s Dipodomys_stephensi.DipSte_scaffold_44365                 26798 2 +     28912 AT---
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 I 3
s Eidolon_helvum.KE772537.1                                 11148 2 +     24177 AG---
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1490447 2 +   1727528 CG---
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        238530 2 -    369425 TA---
i Ellobius_lutescens.LOEQ01003611.1                     I 1 I 3
s Ellobius_talpinus.LOJH01090055.1                           5640 2 -      7838 CA---
i Ellobius_talpinus.LOJH01090055.1                      I 1 I 3
s Enhydra_lutris.KZ291749.1                              85870327 2 +  99434291 aG---
i Enhydra_lutris.KZ291749.1                             I 207 C 0
s Eptesicus_fuscus.JH977687.1                             4703175 2 +   6522550 AG---
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5851900 2 -   7175178 AG---
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13350403 2 +  41866177 AG---
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          11893 2 +     92910 AG---
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11531442 2 +  16010500 AG---
i Erinaceus_europaeus.JH835290.1                        I 1 C 0
s Erythrocebus_patas.Contig8                             48770285 5 -  48907691 AGCAG
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          313995 2 +    330699 AG---
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             60449 2 +     89355 AG---
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              4059 5 +     13586 AGCAG
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               3996 5 -      6809 AGCAG
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            10469 5 +     36558 AGCAG
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             6788 5 +     60246 AGCAG
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                10267 5 +    109717 AGCAG
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               14650 5 +     16540 AGCAG
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                14923 5 +     27497 AGCAG
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           17380 5 +     26808 AGCAG
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                32115 5 +     46535 AGCAG
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              14837 5 -     29447 AGCAG
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129891300 2 - 159252932 at---
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129278372 2 - 158578461 at---
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 19507 2 +     52776 AT---
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Galago_moholi.ctg555                                     209968 5 -    847004 AGCAT
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           12347 5 -     43889 AGCAT
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           9415 5 +     27357 AGCAT
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               155284 2 +    324696 AG---
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    180247 2 -    189561 AG---
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           11899 2 -     18683 AG---
i Glis_glis.GliGli_scaffold_79770                       C 0 I 232
s Gorilla_beringei.k141_111300                               4355 5 -     14630 AGCAG
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119651454 5 - 195582420 AGCAG
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   76629 2 +    118900 AG---
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 I 3
s Hapalemur_alaotrensis.k141_1280836                          860 5 +     10286 AGCAG
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_1254239                            9036 5 +      9690 AGCAG
i Hapalemur_gilberti.k141_1254239                       C 0 C 0
s Hapalemur_griseus.k141_1387522                             4665 5 +     56096 AGCAG
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        27915 5 -     42470 AGCAG
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        44539 5 -     54384 AGCAG
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              15547 2 +     53719 AG---
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                26445 2 -     91191 AG---
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               56548 2 +     73687 TG---
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 I 3
s Hippopotamus_amphibius.HipAmp_scaffold_1308              146070 2 +    277961 AT---
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      277359 2 -    477199 AG---
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              6518 2 -      9143 AG---
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      3756 5 -   7690867 AGCAG
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 14641 2 -     67322 AG---
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hylobates_abbotti.k141_493872                              4182 5 +      5897 AGCAG
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_624065                               1046 5 +      2112 AGCAG
i Hylobates_agilis.k141_624065                          C 0 C 0
s Hylobates_klossii.k141_466549                             10622 5 +     11537 AGCAG
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14623727 5 -  25970782 AGCAG
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                             983 5 -      2977 AGCAG
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Indri_indri.k141_4418183                                    479 5 -      1457 AGCAG
i Indri_indri.k141_4418183                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               7989 2 +     17520 AG---
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8564717 2 +  11848649 AG---
i Jaculus_jaculus.JH725517.1                            I 1 I 3
s Kogia_breviceps.KogBre_flattened_line_35920               22609 2 +     37189 AG---
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          49204 5 -    147782 AGCAG
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   113022 2 -    115756 AG---
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258406220 5 - 285822530 GGCAG
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        22972 5 +     39228 AGCAG
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            52347 5 +     63517 AGCAG
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        77597 5 +    116806 AGCAG
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     30611 5 -     33031 AGCAG
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3084341 2 -   3498232 AG---
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    11974 2 +     22452 AG---
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            134942 2 +   3060487 AG---
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19247353 5 +  19376315 AGCAG
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            9732 5 +     84689 AGCAG
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3777481 5 +   6799190 AGCAG
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20591076 2 -  62548349 TG---
i Loxodonta_africana.GL010040.1                         C 0 I 2
s Lycaon_pictus.CM007556.1                               11086149 2 +  39895028 AG---
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             19093 5 +     74745 AGCAG
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12705549 5 +  12821369 AGCAG
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                1194 5 -      3136 AGCAG
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           46011 5 +     63263 AGCAG
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                  714 5 -      2568 AGCAG
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 1300 5 -      7381 AGCAG
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  44518 5 -     79256 AGCAG
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196034626 5 + 196197964 AGCAG
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11444793 5 +  11645122 AGCAG
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   3465 5 -     46448 AGCAG
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                1137 5 -     13212 AGCAG
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 14817 5 -     55006 AGCAG
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43839935 5 +  43892939 AGCAG
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               16104 5 -     24607 AGCAG
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               3470 5 -     27140 AGCAG
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                700562 2 +    802869 AG---
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43436512 5 -  43563597 AGCAG
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4449338 5 -   4543643 AGCAG
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       63359 2 -    234502 AA---
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_146202             934 2 -      1999 AG---
i Mellivora_capensis.MelCap_flattened_line_146202       C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               11446 2 +     15977 TA---
i Meriones_unguiculatus.MerUng_scaffold_52233           I 1 I 3
s Mesocricetus_auratus.KB708139.1                         1045710 2 -  26018355 TA---
i Mesocricetus_auratus.KB708139.1                       I 1 I 3
s Microcebus_murinus.CM007691.1                          16509225 5 +  47401472 AGCAG
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               21653 2 -     32043 GG---
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22818820 2 -  98408828 TA---
i Microtus_ochrogaster.CM001673.1                       I 1 I 3
s Miniopterus_natalensis.LDJU01000022.1                   8208647 2 +  10048721 AG---
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            33304 2 +     45743 AG---
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         1065 5 +     29742 AGCAG
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         9849 2 -    104932 AG---
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     4615 5 +      8497 AGCAG
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 145377 2 +    154973 AG---
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                160163 2 +    265003 CG---
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 3548 2 -      4346 AG---
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  143238 2 -    168139 AG---
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          18535 2 -    100666 AG---
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70765317 2 +  92629107 TG---
i Mus_caroli.LT608236.1                                 I 1 I 3
s Mus_musculus.chr16                                     75488354 2 +  98207768 TG---
i Mus_musculus.chr16                                    I 1 I 3
s Mus_pahari.LT608305.1                                  67554590 2 +  89017189 TG---
i Mus_pahari.LT608305.1                                 I 1 I 3
s Mus_spretus.CM004110.1                                 74329533 2 +  97876770 TG---
i Mus_spretus.CM004110.1                                I 1 I 3
s Muscardinus_avellanarius.MusAve_scaffold_9643             10610 2 +     98495 AG---
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 I 3
s Mustela_putorius.JH417978.1                             4422506 2 -  28371801 AG---
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myotis_brandtii.KE161952.1                               966840 2 +   8389877 AG---
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5018516 2 +   6462685 AG---
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3464420 2 -   3747815 AG---
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         9635 2 +     66751 AG---
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             4015 2 -      8794 AG---
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            117177 2 +    362372 CA---
i Nannospalax_galili.KL201303.1                         I 1 I 3
s Nasalis_larvatus.k141_153429                               7567 5 +     48152 AGCAG
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4483241 2 -  14209539 AG---
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3949991 2 -   4490290 AG---
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  48267 2 +     94413 AG---
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_302224                            1024 5 +      1516 AGCAG
i Nomascus_annamensis.k141_302224                       C 0 I 50
s Nomascus_concolor.k141_226614                               284 5 -      5092 AGCAG
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_642452                            1067 5 +      2851 AGCAG
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_a.k141_595747                                  1705 5 +      4512 AGCAG
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                29178 2 +   3668941 AG---
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65566166 5 -  95554990 AGCAG
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            2895 5 +      6470 AACAG
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65668504 5 +  89412551 AGCAG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4995059 2 -  23139505 AG---
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Odobenus_rosmarus.KB229369.1                             677886 2 -   3126709 AG---
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1078677 2 +   1425656 AG---
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         35973 2 +     78940 AG---
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  124076 2 +    145789 TA---
i Ondatra_zibethicus.OndZib_scaffold_6821               I 1 I 3
s Onychomys_torridus.OnyTor_scaffold_12578                  35847 2 +     62360 TA---
i Onychomys_torridus.OnyTor_scaffold_12578              I 1 I 3
s Orcinus_orca.KB316965.1                                 7223674 2 -   7562323 AG---
i Orcinus_orca.KB316965.1                               C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141874998 2 + 163896628 AG---
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      306466 2 -    505867 AG---
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       38064 5 +     38679 AGCAT
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18007492 5 -  38779656 AGCAT
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134076239 2 - 275406953 AG---
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      77453 2 +    140051 AG---
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127573715 5 - 205426864 AGCAG
i Pan_paniscus.CM003386.1                               C 0 I 65
s Pan_troglodytes.CM009241.2                            120150868 5 - 196562556 AGCAG
i Pan_troglodytes.CM009241.2                            C 0 I 65
s Panthera_onca.PanOnc_flattened_line_1615                  32701 2 +    295523 AT---
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3636435 2 +  18214204 at---
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5026082 2 -   6340057 at---
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1065100 2 -   1292953 CG---
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188155303 5 - 188283584 AGCAG
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             3620 5 +      5367 AGCAG
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47512691 5 +  47705337 AGCAG
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 66669 5 -    104429 AGCAG
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    5201 5 +     14967 AGCAG
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 1062 5 -      7628 AGCAG
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    114018 2 -    135482 AG---
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           4478 5 -     23713 AGCAG
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            23787 5 -     27972 AGCAG
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      42638 2 -     45160 TG---
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4949115 2 -   8017169 TA---
i Peromyscus_maniculatus.KI615518.1                     I 1 I 3
s Phocoena_phocoena.PhoPho_flattened_line_11948            120291 2 -    122454 AG---
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1987485                           1089 5 -      5908 AGCAG
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       1709 5 -     17985 AGCAG
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            1076 5 +      7694 AGCAG
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26739554 5 +  26888534 AGCAG
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            96462 2 +    112873 AG---
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             42686 5 -     61926 AGCAG
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        24117 5 +     78826 AGCAG
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              8066 5 -     15800 AGCAG
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        11264 5 -     16101 AGCAG
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          4573 5 +      9673 AGCAG
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13473569 5 -  19735023 AGCAG
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           12475 5 -     31692 AGCAG
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           4359 2 +     21690 AG---
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       21910 5 +     44506 AGCAG
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        22122 5 +     67491 AGCAG
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      12361 5 -     98129 AGCAG
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     21961 5 +    147771 AGCAG
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        22216 5 -     23762 AGCAG
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          2682 5 -     55515 AGCAG
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         22035 5 +    152463 AGCAG
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      8795 5 +      8943 AGCAG
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                         11757 5 +    134592 AGCAG
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          22345 5 -     75465 AGCAG
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              186240 5 -    373494 AGCAG
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19806888 5 +  19899266 AGCAG
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               4811 5 -     15069 AGCAG
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              4945 5 +     14865 AGCAG
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                76412 2 +     78963 TG---
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 I 3
s Prolemur_simus.MPIZ01000048.1                           6847601 5 +  12164890 AGCAG
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    666820 5 -   2312742 AGCAG
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         2647 5 +     11805 AGCAG
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           41983 5 +     52369 AGCAG
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         34373 5 -     44753 AGCAG
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            16293 5 +     27322 AGCAG
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       15929 5 -     53241 AGCAG
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         38201 5 -     48185 AGCAG
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           32984 2 +     77221 TA---
i Psammomys_obesus.NESX01026517.1                       I 1 I 3
s Pteronotus_parnellii.KE867983.1                            2831 2 -     27784 AG---
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        244811 2 -    344369 AG---
i Pteronura_brasiliensis.PteBra_flattened_line_1343     I 208 C 0
s Pteropus_alecto.KB031157.1                             13244949 2 -  17261082 AG---
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             602899 2 -   3946241 AG---
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131532665 2 - 161321710 at---
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             28929 5 +     56732 AGCAG
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6805420 5 +   6970761 AGCAG
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             4814 5 +     18040 AGCAG
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                14754 2 +     68503 AA---
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13914361 2 +  90463843 TA---
i Rattus_norvegicus.chr11                               I 1 I 3
s Rhinolophus_sinicus.LVEH01000179.1                      1786761 2 +   2252614 AG---
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_1391695                           1042 5 -      1866 AGCAG
i Rhinopithecus_bieti.k119_1391695                      C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206376699 5 - 206558726 AGCAG
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44855599 5 -  45163003 AGCAG
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                18239 2 +    109198 CA---
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       6556 2 +     12214 AG---
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15671773 5 -  43202129 AGCAG
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        3690 5 +     34089 AGCAG
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              3631 5 -     60842 AGCAG
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              3726 5 +     67014 AGCAG
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              3704 5 +     60816 AGCAG
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 3641 5 -     76454 AGCAG
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17340367 5 -  30362882 AGCGG
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         19726 5 -     62485 AGCGG
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   30321 2 -    114521 TG---
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        2426 5 +     15331 AGCAG
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       7823 5 +     20762 AGCAG
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         117821 5 +    130994 AGCAG
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           36612 5 +     46263 AGCAG
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     29726 5 +     42640 AGCAG
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        12770 5 +     30600 AGCAG
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   98619 2 -    120886 TA---
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 I 3
s Solenodon_paradoxus.SolPar_flattened_line_1012            16941 2 +    739146 AA---
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17749561 1 -  27805282 -C---
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             233349 2 -    276980 AG---
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            25904 2 +     62062 AG---
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189270826 2 + 218635234 AG---
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        13984 5 -  13920577 AGCAG
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               4994 2 -      6213 AG---
i Tadarida_brasiliensis.TadBra_scaffold_145589          I 6 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               13690 2 +     45698 AG---
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      805692 2 +   1148477 AA---
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  56349 2 +     99546 AG---
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               25508 5 +     42269 AGCAA
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               58824 5 +     65473 AGCAA
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194006830 5 - 194193292 AGCAG
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  4553 2 +      6782 AG---
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  134837 2 -    259118 AG---
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        25933 5 +     38948 AGCAG
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   19660 5 -     32910 AGCAG
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      1047 5 -     12939 AGCAG
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                        982 5 -     14244 AGCAG
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           42380 5 -     54611 AGCAG
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                         186 5 -     11566 AGCAG
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     2358 5 -     15592 AGCAG
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          1015 5 +     14371 AGCAG
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  50767 5 +     51589 AGCAG
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       13948 5 +     14732 AGCAG
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       4420 5 -     28054 AGCAG
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44659220 5 -  44834318 AGCAG
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       1523 5 +     13828 AGCAG
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Trichechus_manatus.JH594618.1                          16081538 2 +  31416278 tG---
i Trichechus_manatus.JH594618.1                         C 0 I 3
s Tupaia_chinensis.KB320831.1                             2791779 2 -   3938065 AG---
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    4047 2 +     13056 AG---
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69312391 2 -  96451834 AG---
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_139357                   847 2 +      2103 AG---
i Uropsilus_gracilis.UroGra_scaffold_139357             C 0 C 0
s Varecia_rubra.k141_432109                                  4305 5 -     20643 AGCAG
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             23846 5 -     33872 AGCAG
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1523629 2 -   2331223 TG---
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                136551 2 -    281493 AG---
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        212621 2 -    227762 AG---
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           5886 2 -      8775 GG---
i Ziphius_cavirostris.ZipCav_flattened_line_127025      I 4 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             38334 0 -     47444 C
e Petromus_typicus.PetTyp_scaffold_33007                    11539 0 -     36578 C
e Dinomys_branickii.DinBra_scaffold_1996                   156356 54 +    228994 I
e Ursus_maritimus.KK498671.1                              6513131 3 +  28682327 I
e Tragulus_javanicus.TraJav_scaffold_14717                   4135 0 +     90398 C
e Orycteropus_afer.OryAfe_flattened_line_13509              43378 16 -     66828 I
e Microgale_talazaci.MicTal_scaffold_34660                  30638 409 -     48017 I
e Manis_pentadactyla.KN017078.1                             35015 87 +     58827 I
e Manis_javanica.JSZB01003966.1                            144940 87 +    252755 I
e Elephantulus_edwardii.JH947210.1                        7804622 10712 +  15467074 I
e Echinops_telfairi.JH980316.1                           22994192 422 -  44670279 I
e Ailuropoda_melanoleuca.LNAT01000321.1                  10655655 3 +  23371972 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           18004 0 -    119109 C
e Zapus_hudsonius.ZapHud_scaffold_64392                     14107 296 -     20485 I
e Hylobates_pileatus_a.tarseq_592                             33311 5 -     60944 I
e Xerus_inauris.XerIna_scaffold_7898                       125918 0 -    134049 C
e Spermophilus_dauricus.KZ294190.1                        2238813 0 +   2842873 C
e Octodon_degus.JH651621.1                                3684604 0 +  10294119 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     89059 0 -    117718 C
e Marmota_marmota.CZRN01000005.1                         36872732 0 +  64221397 C
e Ictidomys_tridecemlineatus.JH393315.1                   7124893 0 +  13083262 C
e Hystrix_cristata.HysCri_scaffold_50788                     5180 0 +     22540 C
e Heterocephalus_glaber.JH602058.1                        2550107 0 +  31725842 C
e Fukomys_damarensis.KN123630.1                          13891727 1 -  19261668 I
e Dolichotis_patagonum.DolPat_scaffold_14102                35125 0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             57878 0 -    236241 C
e Cuniculus_paca.CunPac_flattened_line_16637                16786 0 +     26546 C
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 29779 0 -     67205 C
e Chinchilla_lanigera.JH721867.1                         15960778 0 +  43084221 C
e Cavia_tschudii.CavTsc_scaffold_488                       175755 0 +    436027 C
e Cavia_porcellus.DS562889.1                             15797564 0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15785630 0 -  24422027 C
e Castor_canadensis.CasCan_scaffold_47037                   29688 2 +     33760 I
e Capromys_pilorides.CapPil_scaffold_979108                   998 0 -      1248 C
e Nomascus_siki_b.tarseq_80                             24175 0 -  18771707 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               10975 10 +    209709 T---T---ACTACTA------------------------C
s Acinonyx_jubatus.LLWD01000356.1                         2032326  5 +   3721120 t---t---tt-----------------------------t
i Acinonyx_jubatus.LLWD01000356.1                       C 0 I 5
s Acomys_cahirinus.AcoCah_scaffold_1625                    111325  3 -    189883 T---G---G-------------------------------
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 3 I 311
s Ailurus_fulgens.LNAC01000003.1                          7092820  5 -  16596857 T---T---TT-----------------------------T
i Ailurus_fulgens.LNAC01000003.1                        C 0 I 5
s Allactaga_bullata.AllBul_scaffold_70162                   11991  5 -     22067 T---G---GT-----------------------------G
i Allactaga_bullata.AllBul_scaffold_70162               I 3 I 5
s Allenopithecus_nigroviridis.k141_2469532                    334  5 -     60446 T---T---AC-----------------------------T
i Allenopithecus_nigroviridis.k141_2469532              C 0 I 5
s Allochrocebus_lhoesti.k141_3566948                         1054  3 -     29318 --------AC-----------------------------T
i Allochrocebus_lhoesti.k141_3566948                    I 1 I 5
s Allochrocebus_preussi.k141_21781                           1191  5 +      1343 T---T---AC-----------------------------T
i Allochrocebus_preussi.k141_21781                      I 200 I 5
s Allochrocebus_solatus.k141_371672                           947  4 -     80423 ----T---AC-----------------------------T
i Allochrocebus_solatus.k141_371672                     C 0 I 5
s Alouatta_belzebul.k141_1818029                             9240  5 -     18050 T---T---AC-----------------------------T
i Alouatta_belzebul.k141_1818029                        C 0 I 5
s Alouatta_caraya.k141_5460                                 10330  5 -     11521 T---T---AC-----------------------------T
i Alouatta_caraya.k141_5460                             C 0 I 5
s Alouatta_discolor.k141_811576                              9917  5 -     21359 T---T---AC-----------------------------T
i Alouatta_discolor.k141_811576                         C 0 I 5
s Alouatta_juara.k141_298055                                 1213  5 +      1823 T---T---AC-----------------------------T
i Alouatta_juara.k141_298055                            C 0 I 5
s Alouatta_macconnelli.k141_1331706                          9213  5 -     10438 T---T---AC-----------------------------T
i Alouatta_macconnelli.k141_1331706                     C 0 I 5
s Alouatta_nigerrima.k141_2718643                            5869  5 +      7047 T---T---AC-----------------------------T
i Alouatta_nigerrima.k141_2718643                       C 0 I 5
s Alouatta_palliata.k141_1316127                             9149  5 +     10410 T---T---AC-----------------------------T
i Alouatta_palliata.k141_1316127                        C 0 I 5
s Alouatta_puruensis.k141_1284840                            2959  5 -      4927 T---T---AC-----------------------------T
i Alouatta_puruensis.k141_1284840                       C 0 I 5
s Alouatta_seniculus.k141_990213                             5888  5 +      6429 T---T---AC-----------------------------T
i Alouatta_seniculus.k141_990213                        C 0 I 5
s Ammotragus_lervia.NIVO01013474.1                        3519099  5 +   4113121 T---T---GT-----------------------------T
i Ammotragus_lervia.NIVO01013474.1                      C 0 I 5
s Anoura_caudifer.AnoCau_scaffold_422                      389269  5 -    631301 A---T---GT-----------------------------T
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 I 5
s Antilocapra_americana.AntAmePen_scaffold_42841            29682  5 +     33004 T---T---GT-----------------------------T
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 I 5
s Aotus_azarae.k141_3170768                                 61599  5 +     78111 T---T---AC-----------------------------T
i Aotus_azarae.k141_3170768                             C 0 I 5
s Aotus_griseimembra.k141_3275623                            4540  5 +     22701 T---T---AC-----------------------------T
i Aotus_griseimembra.k141_3275623                       C 0 I 5
s Aotus_nancymaae.KZ196176.1                              5748497  5 +   9889416 T---T---AC-----------------------------T
i Aotus_nancymaae.KZ196176.1                            C 0 I 5
s Aotus_trivirgatus.k141_1740727                             5082  5 -    104377 T---T---AC-----------------------------T
i Aotus_trivirgatus.k141_1740727                        C 0 I 5
s Aotus_vociferans.k141_718647                               5088  5 +     23246 T---T---AC-----------------------------T
i Aotus_vociferans.k141_718647                          C 0 I 5
s Aplodontia_rufa.AprRuf_scaffold_156013                     2749  5 +      5067 T---T---GT-----------------------------T
i Aplodontia_rufa.AprRuf_scaffold_156013                I 3 I 5
s Arctocebus_calabarensis.k141_1161114                      17269  5 +     17483 T---T---Aa-----------------------------t
i Arctocebus_calabarensis.k141_1161114                  C 0 I 16
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 7671  6 -     29036 C---G---GT------T----------------------T
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 I 5
s Ateles_geoffroyi_b.tarseq_2582                             9538345  5 +  39197703 T---T---AC-----------------------------T
i Ateles_geoffroyi_b.tarseq_2582                           C 0 I 5
s Ateles_belzebuth.k141_1348307                             59616  5 +     85812 T---T---AC-----------------------------T
i Ateles_belzebuth.k141_1348307                         C 0 I 5
s Ateles_chamek.k141_1072810                                10628  5 +     89302 T---T---AC-----------------------------T
i Ateles_chamek.k141_1072810                            C 0 I 5
s Ateles_geoffroyi_a.k141_1300742                             15133  5 -     58268 T---T---AC-----------------------------T
i Ateles_geoffroyi_a.k141_1300742                         C 0 I 5
s Ateles_marginatus.k141_899112                             63124  5 +    119057 T---T---AC-----------------------------T
i Ateles_marginatus.k141_899112                         C 0 I 5
s Ateles_paniscus.k141_1631200                               5093  5 -     25888 T---T---AC-----------------------------T
i Ateles_paniscus.k141_1631200                          C 0 I 5
s Avahi_laniger.k141_2840928                                 5723  5 -     16375 T---T---AT-----------------------------T
i Avahi_laniger.k141_2840928                            C 0 I 2
s Avahi_peyrierasi.k141_2689020                              2043  5 +      2719 T---T---AT-----------------------------T
i Avahi_peyrierasi.k141_2689020                         C 0 I 2
s Balaenoptera_acutorostrata.KI537095.1                  26379112  5 +  51448160 T---T---GT-----------------------------T
i Balaenoptera_acutorostrata.KI537095.1                 C 0 I 5
s Balaenoptera_bonaerensis.DF502048.1                        4344  5 -     13118 T---T---GT-----------------------------T
i Balaenoptera_bonaerensis.DF502048.1                   C 0 I 5
s Beatragus_hunteri.BeaHun_scaffold_21644                   42162  5 -     72089 T---T---GT-----------------------------T
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 I 5
s Bison_bison.KN264915.1                                  6558473  5 +   6870073 T---T---GT-----------------------------t
i Bison_bison.KN264915.1                                C 0 I 5
s Bos_indicus.CM003021.1                                138138699  5 - 161108492 T---T---GT-----------------------------T
i Bos_indicus.CM003021.1                                C 0 I 5
s Bos_mutus.JH883513.1                                     571086  5 -    998990 T---T---GT-----------------------------t
i Bos_mutus.JH883513.1                                  C 0 I 70
s Bos_taurus.CM000177.6                                 136294432  5 - 158972876 T---T---GT-----------------------------T
i Bos_taurus.CM000177.6                                 C 0 I 5
s Bubalus_bubalis.KI419065.1                              1230199  5 -   1914593 T---T---GT-----------------------------T
i Bubalus_bubalis.KI419065.1                            C 0 I 5
s Cacajao_ayresi.k141_724503                               112986  5 -    171031 T---T---AC-----------------------------T
i Cacajao_ayresi.k141_724503                            C 0 I 5
s Cacajao_calvus.k141_96166                                 12014  5 +    125063 T---T---AC-----------------------------T
i Cacajao_calvus.k141_96166                             C 0 I 5
s Cacajao_hosomi.k141_303789                                14059  5 -    216513 T---T---AC-----------------------------T
i Cacajao_hosomi.k141_303789                            C 0 I 5
s Cacajao_melanocephalus.k141_1160263                        6599  5 -    134917 T---T---AC-----------------------------T
i Cacajao_melanocephalus.k141_1160263                   C 0 I 5
s Camelus_bactrianus.KN276303.1                           3218524  5 -   8989139 T---T---GT-----------------------------T
i Camelus_bactrianus.KN276303.1                         C 0 I 5
s Camelus_dromedarius.KN271192.1                           396229  5 -  15254737 T---T---GT-----------------------------T
i Camelus_dromedarius.KN271192.1                        C 0 I 5
s Camelus_ferus.KB016973.1                                2971962  5 +   6889770 T---T---GT-----------------------------T
i Camelus_ferus.KB016973.1                              C 0 I 5
s CanFam4.chr31                                          11517498  5 +  39901454 T---A---TT-----------------------------T
i CanFam4.chr31                                         C 0 I 5
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   12523  5 +     87036 T---A---TT-----------------------------T
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 I 5
s Canis_lupus_dingo.QKWQ01001993.1                       11264163  5 -  35597290 T---A---TT-----------------------------T
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 I 5
s Canis_lupus_familiaris.chr31                           11086695  5 +  39895921 T---A---TT-----------------------------T
i Canis_lupus_familiaris.chr31                          C 0 I 5
s Canis_lupus_orion.HG994411.1                           16453714  5 -  44759192 T---A---TT-----------------------------T
i Canis_lupus_orion.HG994411.1                          C 0 I 5
s Capra_aegagrus.CM003214.1                              21324175  5 + 157394656 T---T---GT-----------------------------T
i Capra_aegagrus.CM003214.1                             C 0 I 5
s Capra_hircus.CM004562.1                               135705402  5 - 157403528 T---T---GT-----------------------------T
i Capra_hircus.CM004562.1                               C 0 I 5
s Capromys_pilorides.CapPil_scaffold_979108                   998  8 -      1248 TTGTT---GT-----------------------------T
i Capromys_pilorides.CapPil_scaffold_979108             C 0 I 8
s Carlito_syrichta.NW_007248099.1                          308029  5 +    345090 T---T---AT-----------------------------T
i Carlito_syrichta.NW_007248099.1                       C 0 I 5
s Carollia_perspicillata.CarPer_scaffold_4436               58470  5 +     67245 C---A---GT-----------------------------T
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 I 5
s Castor_canadensis.CasCan_scaffold_47037                   29690  5 +     33760 C---T---GT-----------------------------T
i Castor_canadensis.CasCan_scaffold_47037               I 2 I 7
s Catagonus_wagneri.CatWag_scaffold_1305                   157738  2 -    276539 ---------T-----------------------------T
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 I 5
s Cavia_aperea.AVPZ01000278.1                            15785630  5 -  24422027 T---T---GT-----------------------------T
i Cavia_aperea.AVPZ01000278.1                           C 0 I 9
s Cavia_porcellus.DS562889.1                             15797564  5 -  24440124 T---T---GT-----------------------------T
i Cavia_porcellus.DS562889.1                            C 0 I 9
s Cavia_tschudii.CavTsc_scaffold_488                       175755  5 +    436027 T---T---GT-----------------------------T
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 I 9
s Cebus_albifrons.Contig22                               18889829  5 -  29618158 T---T---AC-----------------------------T
i Cebus_albifrons.Contig22                              C 0 I 5
s Cebus_olivaceus.k141_93739                                 7373  5 -     26817 T---T---AC-----------------------------T
i Cebus_olivaceus.k141_93739                            C 0 I 5
s Cebus_unicolor.k141_239009                                11613  5 +     25043 T---T---AC-----------------------------T
i Cebus_unicolor.k141_239009                            C 0 I 5
s Cephalopachus_bancanus.k141_702587                         7062  5 +     21754 T---T---AT-----------------------------T
i Cephalopachus_bancanus.k141_702587                    C 0 I 5
s Ceratotherium_simum.JH767818.1                          4362838  5 +   7569818 T---T---GC-----------------------------T
i Ceratotherium_simum.JH767818.1                        C 0 I 5
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         2590  5 -      9338 T---T---GC-----------------------------T
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 I 5
s Cercocebus_atys.KQ010443.1                              6554269  5 +   6739814 T---T---AC-----------------------------T
i Cercocebus_atys.KQ010443.1                            C 0 I 5
s Cercocebus_chrysogaster.k141_2328246                      25746  5 +     60454 T---T---AC-----------------------------T
i Cercocebus_chrysogaster.k141_2328246                  C 0 I 5
s Cercocebus_lunulatus.k141_4634644                           951  5 -     21101 T---T---AC-----------------------------T
i Cercocebus_lunulatus.k141_4634644                     C 0 I 5
s Cercocebus_torquatus.k141_3969582                         58261  5 -    107033 T---T---AC-----------------------------T
i Cercocebus_torquatus.k141_3969582                     C 0 I 5
s Cercopithecus_ascanius.k141_4123525                        1153  5 -     17608 T---T---AC-----------------------------T
i Cercopithecus_ascanius.k141_4123525                   C 0 I 5
s Cercopithecus_cephus.k141_598190                          28648  5 +     30494 T---T---AC-----------------------------T
i Cercopithecus_cephus.k141_598190                      C 0 I 5
s Cercopithecus_diana.k141_2980617                          57494  5 -     59240 T---T---AC-----------------------------T
i Cercopithecus_diana.k141_2980617                      C 0 I 5
s Cercopithecus_hamlyni.k141_129805                          1195  5 +     16677 T---T---AC-----------------------------T
i Cercopithecus_hamlyni.k141_129805                     C 0 I 5
s Cercopithecus_lowei.k141_623764                           23353  5 +     35983 T---T---AC-----------------------------T
i Cercopithecus_lowei.k141_623764                       C 0 I 5
s Cercopithecus_albogularis.ctg51                              11989881  5 +  12117833 T---T---AC-----------------------------T
i Cercopithecus_albogularis.ctg51                             C 0 I 5
s Cercopithecus_mona.ctg12                               46476639  5 +  46592721 T---T---AC-----------------------------T
i Cercopithecus_mona.ctg12                              C 0 I 5
s Cercopithecus_neglectus.k141_2078027                      40190  5 -     45581 T---T---AC-----------------------------T
i Cercopithecus_neglectus.k141_2078027                  C 0 I 5
s Cercopithecus_nictitans.k141_1129315                       1196  5 +     35577 T---T---AC-----------------------------T
i Cercopithecus_nictitans.k141_1129315                  C 0 I 5
s Cercopithecus_petaurista.k141_64532                         972  5 -     25661 T---T---AC-----------------------------T
i Cercopithecus_petaurista.k141_64532                   C 0 I 5
s Cercopithecus_pogonias.k141_3109732                         950  5 -     17744 T---T---AC-----------------------------T
i Cercopithecus_pogonias.k141_3109732                   C 0 I 5
s Cercopithecus_roloway.k141_2263608                        20559  5 +     37128 T---T---AC-----------------------------T
i Cercopithecus_roloway.k141_2263608                    C 0 I 5
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           1784  5 -      6963 T---T---GT-----------------------------T
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 I 5
s Cheirogaleus_major.k141_1157592                           58020  5 -     68416 T---T---AT-----------------------------T
i Cheirogaleus_major.k141_1157592                       C 0 I 2
s Cheirogaleus_medius.k141_133808                            7063  5 +     13308 T---T---AT-----------------------------T
i Cheirogaleus_medius.k141_133808                       C 0 I 2
s Cheracebus_lucifer.k141_619653                             4629  5 -     18223 T---T---AC-----------------------------T
i Cheracebus_lucifer.k141_619653                        C 0 I 5
s Cheracebus_lugens.k141_203936                             21652  5 +     25473 T---T---AC-----------------------------T
i Cheracebus_lugens.k141_203936                         C 0 I 5
s Cheracebus_regulus.k141_2128895                           40687  5 +     57117 T---T---AC-----------------------------T
i Cheracebus_regulus.k141_2128895                       C 0 I 5
s Cheracebus_torquatus.k141_315545                          45366  5 +     54541 T---T---AC-----------------------------T
i Cheracebus_torquatus.k141_315545                      C 0 I 5
s Chinchilla_lanigera.JH721867.1                         15960778  5 +  43084221 T---T---gt-----------------------------t
i Chinchilla_lanigera.JH721867.1                        C 0 I 9
s Chiropotes_israelita.k141_1189915                         70188  5 +    196370 T---T---AC-----------------------------T
i Chiropotes_israelita.k141_1189915                     C 0 I 5
s Chiropotes_sagulatus.k141_773804                          14368  5 +     40510 T---T---AC-----------------------------T
i Chiropotes_sagulatus.k141_773804                      C 0 I 5
s Chlorocebus_aethiops.ctg22                             15138112  5 -  15256731 T---T---AC-----------------------------T
i Chlorocebus_aethiops.ctg22                            C 0 I 5
s Chlorocebus_pygerythrus.k141_1486215                      33159  5 -     53260 T---T---AC-----------------------------T
i Chlorocebus_pygerythrus.k141_1486215                  C 0 I 5
s Chlorocebus_sabaeus.CM001963.2                        101143723  5 + 101219884 T---T---AC-----------------------------T
i Chlorocebus_sabaeus.CM001963.2                        C 0 I 5
s Choloepus_didactylus.ChoDid_scaffold_36182                15456  5 -     21363 T---T---GT-----------------------------T
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 I 5
s Choloepus_hoffmanni.KN194586.1                           760764  5 +    964067 T---T---GT-----------------------------T
i Choloepus_hoffmanni.KN194586.1                        C 0 I 5
s Colobus_angolensis.KN985967.1                          10885489  5 +  10971483 T---T---AC-----------------------------T
i Colobus_angolensis.KN985967.1                         C 0 I 5
s Colobus_guereza.LG08                                  147663653  5 + 156195979 T---T---AC-----------------------------T
i Colobus_guereza.LG08                                  C 0 I 5
s Colobus_polykomos.k141_1406057                            15638  5 +     23629 T---T---AC-----------------------------T
i Colobus_polykomos.k141_1406057                        C 0 I 5
s Condylura_cristata.JH655880.1                          60611580  5 +  78930452 T---T---GT-----------------------------T
i Condylura_cristata.JH655880.1                         C 0 I 5
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         38576  5 -     40477 T---T---GT-----------------------------T
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 I 5
s Cricetomys_gambianus.CriGam_scaffold_949                 277293  5 -    399297 T---G---GT-----------------------------T
i Cricetomys_gambianus.CriGam_scaffold_949              I 3 I 264
s Cricetulus_griseus.LT883672.1                          53027974  5 +  72327488 C---A---GT-----------------------------T
i Cricetulus_griseus.LT883672.1                         I 3 I 258
s Crocidura_indochinensis.CroInd_scaffold_38409             18595  5 -     19186 T---T---GC-----------------------------C
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 I 86
s Cryptoprocta_ferox.CryFer_flattened_line_19014            50341  5 -     70449 T---T---TT-----------------------------T
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 I 5
s Ctenodactylus_gundi.CteGun_scaffold_447                  207197  5 -    956709 T---T---GT-----------------------------T
i Ctenodactylus_gundi.CteGun_scaffold_447               I 3 I 5
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 29779  4 -     67205 T---T---G------------------------------T
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 I 8
s Cuniculus_paca.CunPac_flattened_line_16637                16786  5 +     26546 T---T---GT-----------------------------T
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 I 9
s Dasyprocta_punctata.DasPun_flattened_line_634             57878  5 -    236241 T---T---GT-----------------------------T
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 I 9
s Dasypus_novemcinctus.JH568778.1                          182619  5 -   6883506 T---T---GT-----------------------------T
i Dasypus_novemcinctus.JH568778.1                       C 0 I 5
s Daubentonia_madagascariensis.ctg11                     16843879  5 +  31942871 T---T---AA-----------------------------T
i Daubentonia_madagascariensis.ctg11                    C 0 I 2
s Delphinapterus_leucas.KZ290064.1                       80035791  5 -  96802777 T---C---AT-----------------------------T
i Delphinapterus_leucas.KZ290064.1                      C 0 I 5
s Desmodus_rotundus.KZ672188.1                           18697779  5 -  18957592 C---G---GT-----------------------------T
i Desmodus_rotundus.KZ672188.1                          C 0 I 5
s Dicerorhinus_sumatrensis.PEKH010003161.1                 321485  5 +    993696 T---T---GC-----------------------------T
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 I 5
s Diceros_bicornis.DicBicMic_scaffold_9545                   2137  5 +    151128 T---T---GC-----------------------------T
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 I 5
s Dipodomys_ordii.KN672545.1                              3655170  5 +   4240102 T---T---GG-----------------------------T
i Dipodomys_ordii.KN672545.1                            I 3 I 5
s Dipodomys_stephensi.DipSte_scaffold_44365                 26803  5 +     28912 T---T---GG-----------------------------T
i Dipodomys_stephensi.DipSte_scaffold_44365             I 3 I 5
s Dolichotis_patagonum.DolPat_scaffold_14102                35125  5 -     73477 T---T---GT-----------------------------T
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 I 9
s Eidolon_helvum.KE772537.1                                 11150  5 +     24177 T---T---GT-----------------------------T
i Eidolon_helvum.KE772537.1                             C 0 I 5
s Elaphurus_davidianus.JRFZ01086400.1                     1490449  5 +   1727528 T---T---GT-----------------------------T
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 I 5
s Ellobius_lutescens.LOEQ01003611.1                        238535  5 -    369425 C---T---GT-----------------------------C
i Ellobius_lutescens.LOEQ01003611.1                     I 3 I 254
s Ellobius_talpinus.LOJH01090055.1                           5645  5 -      7838 C---G---TT-----------------------------C
i Ellobius_talpinus.LOJH01090055.1                      I 3 I 257
s Enhydra_lutris.KZ291749.1                              85870329  5 +  99434291 T---T---TT-----------------------------T
i Enhydra_lutris.KZ291749.1                             C 0 I 5
s Eptesicus_fuscus.JH977687.1                             4703177  5 +   6522550 T---A---GT-----------------------------T
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5851902  5 -   7175178 T---T---GC-----------------------------C
i Equus_asinus.JREZ01000062.1                           C 0 I 5
s Equus_caballus.CM000402.2                              13350405  5 +  41866177 T---T---GC-----------------------------C
i Equus_caballus.CM000402.2                             C 0 I 5
s Equus_przewalskii.ATBW01073585.1                          11895  5 +     92910 T---T---GC-----------------------------C
i Equus_przewalskii.ATBW01073585.1                      C 0 I 5
s Erinaceus_europaeus.JH835290.1                         11531444  5 +  16010500 T---T---GC-----------------------------T
i Erinaceus_europaeus.JH835290.1                        C 0 I 8
s Erythrocebus_patas.Contig8                             48770290  5 -  48907691 T---T---AC-----------------------------T
i Erythrocebus_patas.Contig8                            C 0 I 5
s Eschrichtius_robustus.EscRob_flattened_line_685          313997  5 +    330699 T---T---GT-----------------------------T
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 I 5
s Eubalaena_japonica.EubJap_flattened_line_7756             60451  5 +     89355 T---T---GT-----------------------------T
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 I 5
s Eulemur_albifrons.k141_715837                              4064  5 +     13586 T---T---AT-----------------------------T
i Eulemur_albifrons.k141_715837                         C 0 I 2
s Eulemur_collaris.k141_311830                               4001  5 -      6809 T---T---AT-----------------------------T
i Eulemur_collaris.k141_311830                          C 0 I 2
s Eulemur_coronatus.k141_3240342                            10474  5 +     36558 T---T---AT-----------------------------T
i Eulemur_coronatus.k141_3240342                        C 0 I 2
s Eulemur_flavifrons.k141_903901                             6793  5 +     60246 T---T---AT-----------------------------T
i Eulemur_flavifrons.k141_903901                        C 0 I 2
s Eulemur_fulvus.k141_653297                                10272  5 +    109717 T---T---AT-----------------------------T
i Eulemur_fulvus.k141_653297                            C 0 I 2
s Eulemur_macaco.k141_1341545                               14655  5 +     16540 T---T---AT-----------------------------T
i Eulemur_macaco.k141_1341545                           C 0 I 2
s Eulemur_mongoz.k141_825972                                14928  5 +     27497 T---T---AT-----------------------------T
i Eulemur_mongoz.k141_825972                            C 0 I 2
s Eulemur_rubriventer.k141_411740                           17385  5 +     26808 T---T---AT-----------------------------T
i Eulemur_rubriventer.k141_411740                       C 0 I 2
s Eulemur_rufus.k141_1620292                                32120  5 +     46535 T---T---AT-----------------------------T
i Eulemur_rufus.k141_1620292                            C 0 I 2
s Eulemur_sanfordi.k141_186399                              14842  5 -     29447 T---T---AT-----------------------------T
i Eulemur_sanfordi.k141_186399                          C 0 I 2
s Felis_catus.CM001386.2                                129891302  5 - 159252932 t---t---tt-----------------------------t
i Felis_catus.CM001386.2                                C 0 I 5
s Felis_catus_fca126.CM031420.1                         129278374  5 - 158578461 t---t---tt-----------------------------t
i Felis_catus_fca126.CM031420.1                         C 0 I 5
s Felis_nigripes.FelNig_flattened_line_8080                 19509  5 +     52776 T---T---TT-----------------------------T
i Felis_nigripes.FelNig_flattened_line_8080             C 0 I 5
s Fukomys_damarensis.KN123630.1                          13891728  8 -  19261668 T---TGTTGC-----------------------------T
i Fukomys_damarensis.KN123630.1                         I 1 I 9
s Galago_moholi.ctg555                                     209973  5 -    847004 T---T---AG-----------------------------T
i Galago_moholi.ctg555                                  C 0 I 2
s Galago_senegalensis.k141_964197                           12352  5 -     43889 T---T---AA-----------------------------T
i Galago_senegalensis.k141_964197                       C 0 I 2
s Galagoides_demidoff.k141_1769638                           9420  5 +     27357 T---T---AA-----------------------------T
i Galagoides_demidoff.k141_1769638                      C 0 I 2
s Galeopterus_variegatus.GalVar_scaffold_354               155286  5 +    324696 T---T---GC-----------------------------T
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 I 5
s Giraffa_tippelskirchi.LVKQ01S012154.1                    180249  5 -    189561 T---T---GT-----------------------------T
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 I 5
s Glis_glis.GliGli_scaffold_79770                           12133  5 -     18683 T---T---GT-----------------------------T
i Glis_glis.GliGli_scaffold_79770                       I 232 I 5
s Gorilla_beringei.k141_111300                               4360  5 -     14630 T---T---AC-----------------------------C
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119651459  5 - 195582420 T---T---AC-----------------------------C
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   76634  5 +    118900 T---T---GT-----------------------------T
i Graphiurus_murinus.GraMur_scaffold_4493               I 3 I 19
s Hapalemur_alaotrensis.k141_1280836                          865  5 +     10286 T---T---AT-----------------------------G
i Hapalemur_alaotrensis.k141_1280836                    C 0 I 2
s Hapalemur_gilberti.k141_1254239                            9041  5 +      9690 T---T---AT-----------------------------T
i Hapalemur_gilberti.k141_1254239                       C 0 I 2
s Hapalemur_griseus.k141_1387522                             4670  5 +     56096 T---T---AT-----------------------------T
i Hapalemur_griseus.k141_1387522                        C 0 I 2
s Hapalemur_meridionalis.k141_186231                        27920  5 -     42470 T---T---AT-----------------------------T
i Hapalemur_meridionalis.k141_186231                    C 0 I 2
s Hapalemur_occidentalis.k141_797938                        44544  5 -     54384 T---T---AT-----------------------------T
i Hapalemur_occidentalis.k141_797938                    C 0 I 2
s Helogale_parvula.HelPar_flattened_line_22962              15549  4 +     53719 T---T----T-----------------------------T
i Helogale_parvula.HelPar_flattened_line_22962          C 0 I 5
s Hemitragus_hylocrius.HemHyl_scaffold_16669                26447  5 -     91191 T---T---GT-----------------------------T
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 I 5
s Heterocephalus_glaber.JH602058.1                        2550107  8 +  31725842 T---TGTTGC-----------------------------T
i Heterocephalus_glaber.JH602058.1                      C 0 I 9
s Heterohyrax_brucei.HetBruBak_scaffold_25354               56553  5 +     73687 T---T---AT-----------------------------T
i Heterohyrax_brucei.HetBruBak_scaffold_25354           I 3 I 5
s Hippopotamus_amphibius.HipAmp_scaffold_1308              146072  5 +    277961 T---T---GT-----------------------------T
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 I 5
s Hipposideros_armiger.JXIK01001085.1                      277361  5 -    477199 T---C---GT-----------------------------T
i Hipposideros_armiger.JXIK01001085.1                   C 0 I 5
s Hipposideros_galeritus.HipGal_scaffold_104691              6520  5 -      9143 T---C---GT-----------------------------T
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 I 5
s Hoolock_leuconedys.ctg79                                      3761  5 -   7690867 T---T---AC-----------------------------T
i Hoolock_leuconedys.ctg79                                 C 0 I 65
s Hyaena_hyaena.HyaHya_flattened_line_20729                 14643 29 -     67322 T---T---TT-----ATACCTGCAATATTTTTAAATGTGT
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 I 5
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           18004  5 -    119109 T---T---GT-----------------------------T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 I 9
s Hylobates_abbotti.k141_493872                              4187  5 +      5897 T---T---AC-----------------------------T
i Hylobates_abbotti.k141_493872                         C 0 I 5
s Hylobates_agilis.k141_624065                               1051  5 +      2112 T---T---AC-----------------------------T
i Hylobates_agilis.k141_624065                          C 0 I 5
s Hylobates_klossii.k141_466549                             10627  5 +     11537 T---T---AC-----------------------------T
i Hylobates_klossii.k141_466549                         C 0 I 5
s Hylobates_pileatus_b.ContigUN                                 14623732  5 -  25970782 T---T---AC-----------------------------T
i Hylobates_pileatus_b.ContigUN                                C 0 I 5
s Hylobates_muelleri.k141_1389047                             988  5 -      2977 T---T---AC-----------------------------T
i Hylobates_muelleri.k141_1389047                       C 0 I 5
s Hystrix_cristata.HysCri_scaffold_50788                     5180  5 +     22540 T---T---GT-----------------------------T
i Hystrix_cristata.HysCri_scaffold_50788                C 0 I 9
s Ictidomys_tridecemlineatus.JH393315.1                   7124893  4 +  13083262 ----T---AT-----------------------------T
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 I 5
s Indri_indri.k141_4418183                                    484  5 -      1457 T---C---GT-----------------------------T
i Indri_indri.k141_4418183                              C 0 I 2
s Inia_geoffrensis.IniGeo_flattened_line_66725               7991  5 +     17520 T---T---GT-----------------------------T
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 I 5
s Jaculus_jaculus.JH725517.1                              8564722  5 +  11848649 T---G---AT-----------------------------G
i Jaculus_jaculus.JH725517.1                            I 3 I 5
s Kogia_breviceps.KogBre_flattened_line_35920               22611  5 +     37189 T---T---GT-----------------------------T
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 I 5
s Lagothrix_lagothricha.k141_12968                          49209  5 -    147782 T---T---AC-----------------------------T
i Lagothrix_lagothricha.k141_12968                      C 0 I 5
s Lasiurus_borealis.LasBor_scaffold_5102                   113024  5 -    115756 T---A---AT-----------------------------T
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258406225  5 - 285822530 T---C---AT-----------------------------T
i Lemur_catta.scaffold_1                                C 0 I 2
s Lepilemur_ankaranensis.k141_884009                        22977  5 +     39228 T---T---AT-----------------------------T
i Lepilemur_ankaranensis.k141_884009                    C 0 I 2
s Lepilemur_dorsalis.k141_134267                            52352  5 +     63517 T---T---AT-----------------------------T
i Lepilemur_dorsalis.k141_134267                        C 0 I 2
s Lepilemur_ruficaudatus.k141_617879                        77602  5 +    116806 T---T---AT-----------------------------T
i Lepilemur_ruficaudatus.k141_617879                    C 0 I 2
s Lepilemur_septentrionalis.k141_578524                     30616  5 -     33031 T---T---AT-----------------------------T
i Lepilemur_septentrionalis.k141_578524                 C 0 I 2
s Leptonychotes_weddellii.KB714749.1                      3084343  5 -   3498232 T---T---TT-----------------------------T
i Leptonychotes_weddellii.KB714749.1                    C 0 I 5
s Lepus_americanus.LepAme_scaffold_62849                    11976  5 +     22452 T---T---GT-----------------------------T
i Lepus_americanus.LepAme_scaffold_62849                C 0 I 5
s Lipotes_vexillifer.KE558548.1                            134944  5 +   3060487 T---T---GT-----------------------------T
i Lipotes_vexillifer.KE558548.1                         C 0 I 5
s Lophocebus_aterrimus.ctg55                             19247358  5 +  19376315 T---T---AC-----------------------------T
i Lophocebus_aterrimus.ctg55                            C 0 I 5
s Loris_lydekkerianus.k141_550999                            9737  5 +     84689 T---T---AA-----------------------------T
i Loris_lydekkerianus.k141_550999                       C 0 I 2
s Loris_tardigradus.ctg97                                 3777486  5 +   6799190 T---T---AA-----------------------------T
i Loris_tardigradus.ctg97                               C 0 I 2
s Loxodonta_africana.GL010040.1                          20591080  5 -  62548349 T---T---AT-----------------------------T
i Loxodonta_africana.GL010040.1                         I 2 I 5
s Lycaon_pictus.CM007556.1                               11086151  5 +  39895028 T---A---TT-----------------------------T
i Lycaon_pictus.CM007556.1                              C 0 I 5
s Macaca_arctoides.k141_2201161                             19098  5 +     74745 T---T---AC-----------------------------T
i Macaca_arctoides.k141_2201161                         C 0 I 5
s Macaca_assamensis.Contig65                             12705554  5 +  12821369 T---T---AC-----------------------------T
i Macaca_assamensis.Contig65                            C 0 I 5
s Macaca_cyclopis.k119_893486                                1199  5 -      3136 T---T---AC-----------------------------T
i Macaca_cyclopis.k119_893486                           C 0 I 5
s Macaca_fascicularis.k141_155037                           46016  5 +     63263 T---T---AC-----------------------------T
i Macaca_fascicularis.k141_155037                       C 0 I 5
s Macaca_fuscata.k119_599327                                  719  5 -      2568 T---T---AC-----------------------------T
i Macaca_fuscata.k119_599327                            C 0 I 5
s Macaca_leonina.k141_467472                                 1305  5 -      7381 T---T---AC-----------------------------T
i Macaca_leonina.k141_467472                            C 0 I 5
s Macaca_maura.k141_251854                                  44523  5 -     79256 T---T---AC-----------------------------T
i Macaca_maura.k141_251854                              C 0 I 5
s Macaca_mulatta.NC_041755.1                            196034631  5 + 196197964 T---T---AC-----------------------------T
i Macaca_mulatta.NC_041755.1                            C 0 I 5
s Macaca_nemestrina.KQ004885.1                           11444798  5 +  11645122 T---T---AC-----------------------------T
i Macaca_nemestrina.KQ004885.1                          C 0 I 5
s Macaca_nigra.k141_282495                                   3470  5 -     46448 T---T---AC-----------------------------T
i Macaca_nigra.k141_282495                              C 0 I 5
s Macaca_radiata.k141_3680256                                1142  5 -     13212 T---T---AC-----------------------------T
i Macaca_radiata.k141_3680256                           C 0 I 5
s Macaca_siberu.k141_741907                                 14822  5 -     55006 T---T---AC-----------------------------T
i Macaca_siberu.k141_741907                             C 0 I 5
s Macaca_silenus.Contig12                                43839940  5 +  43892939 T---T---AC-----------------------------T
i Macaca_silenus.Contig12                               C 0 I 5
s Macaca_thibetana.k99_662710                               16109  5 -     24607 T---T---AC-----------------------------T
i Macaca_thibetana.k99_662710                           C 0 I 5
s Macaca_tonkeana.k141_2870633                               3475  5 -     27140 T---T---AC-----------------------------T
i Macaca_tonkeana.k141_2870633                          C 0 I 5
s Macroglossus_sobrinus.MacSob_scaffold_879                700564  5 +    802869 T---T---GT-----------------------------T
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 I 5
s Mandrillus_leucophaeus.scaffold125                     43436517  5 -  43563597 T---T---AC-----------------------------T
i Mandrillus_leucophaeus.scaffold125                    C 0 I 5
s Mandrillus_sphinx.Contig144                             4449343  5 -   4543643 T---T---AC-----------------------------T
i Mandrillus_sphinx.Contig144                           C 0 I 5
s Marmota_marmota.CZRN01000005.1                         36872732  4 +  64221397 ----T---AT-----------------------------T
i Marmota_marmota.CZRN01000005.1                        C 0 I 5
s Megaderma_lyra.MegLyr_scaffold_3562                       63361  5 -    234502 T---T---GT-----------------------------T
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 I 5
s Mellivora_capensis.MelCap_flattened_line_146202             936  5 -      1999 T---T---TT-----------------------------T
i Mellivora_capensis.MelCap_flattened_line_146202       C 0 I 5
s Meriones_unguiculatus.MerUng_scaffold_52233               11451  5 +     15977 T---G---GT-----------------------------T
i Meriones_unguiculatus.MerUng_scaffold_52233           I 3 I 287
s Mesocricetus_auratus.KB708139.1                         1045715  5 -  26018355 C---A---GT-----------------------------T
i Mesocricetus_auratus.KB708139.1                       I 3 I 228
s Microcebus_murinus.CM007691.1                          16509230  5 +  47401472 T---T---AT-----------------------------T
i Microcebus_murinus.CM007691.1                         C 0 I 2
s Micronycteris_hirsuta.MicHir_scaffold_37978               21655  5 -     32043 C---G---GT-----------------------------T
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 I 5
s Microtus_ochrogaster.CM001673.1                        22818825  5 -  98408828 C---G---TT-----------------------------C
i Microtus_ochrogaster.CM001673.1                       I 3 I 257
s Miniopterus_natalensis.LDJU01000022.1                   8208649  5 +  10048721 T---G---CT-----------------------------T
i Miniopterus_natalensis.LDJU01000022.1                 C 0 I 5
s Miniopterus_schreibersii.MinSch_scaffold_24116            33306  5 +     45743 T---G---CT-----------------------------T
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 I 5
s Miopithecus_ogouensis.k141_2935907                         1070  5 +     29742 T---T---AC-----------------------------T
i Miopithecus_ogouensis.k141_2935907                    C 0 I 5
s Mirounga_angustirostris.MirAng_flattened_line_8852         9851  5 -    104932 T---T---TT-----------------------------T
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 I 5
s Mirza_zaza.k141_226143                                     4620  5 +      8497 T---T---GT-----------------------------T
i Mirza_zaza.k141_226143                                C 0 I 2
s Monodon_monoceros.MonMon_M_scaffold_5598                 145379  5 +    154973 T---C---GT-----------------------------T
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 I 5
s Mormoops_blainvillei.MorMeg_scaffold_2952                160165  5 +    265003 T---G---GT-----------------------------T
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 I 5
s Moschus_moschiferus.MosMos_scaffold_146101                 3550  5 -      4346 T---T---GT-----------------------------T
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 I 5
s Mungos_mungo.MunMun_flattened_line_8729                  143240  4 -    168139 T---T----T-----------------------------T
i Mungos_mungo.MunMun_flattened_line_8729               C 0 I 5
s Murina_feae.MurFea_scaffold_2254                          18537  5 -    100666 T---A---GT-----------------------------T
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70765322  5 +  92629107 T---G---GT-----------------------------T
i Mus_caroli.LT608236.1                                 I 3 I 266
s Mus_musculus.chr16                                     75488359  5 +  98207768 T---G---GT-----------------------------T
i Mus_musculus.chr16                                    I 3 I 267
s Mus_pahari.LT608305.1                                  67554595  5 +  89017189 T---G---GT-----------------------------T
i Mus_pahari.LT608305.1                                 I 3 I 266
s Mus_spretus.CM004110.1                                 74329538  5 +  97876770 T---G---GT-----------------------------T
i Mus_spretus.CM004110.1                                I 3 I 267
s Muscardinus_avellanarius.MusAve_scaffold_9643             10615  5 +     98495 T---T---GT-----------------------------T
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 3 I 5
s Mustela_putorius.JH417978.1                             4422508  5 -  28371801 T---T---TT-----------------------------T
i Mustela_putorius.JH417978.1                           C 0 I 5
s Myocastor_coypus.MyoCoy_scaffold_3653                     89059  8 -    117718 TTGTT---GC-----------------------------T
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 I 8
s Myotis_brandtii.KE161952.1                               966842  5 +   8389877 T---A---GT-----------------------------T
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5018518  5 +   6462685 T---A---GT-----------------------------T
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3464422  5 -   3747815 T---A---GT-----------------------------T
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         9637  5 +     66751 T---A---GT-----------------------------T
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             4017  5 -      8794 T---T---GG-----------------------------T
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 I 5
s Nannospalax_galili.KL201303.1                            117182  5 +    362372 T---G---GT-----------------------------T
i Nannospalax_galili.KL201303.1                         I 3 I 240
s Nasalis_larvatus.k141_153429                               7572  5 +     48152 T---T---AC-----------------------------T
i Nasalis_larvatus.k141_153429                          C 0 I 5
s Neomonachus_schauinslandi.NINY01007774.1                4483243  5 -  14209539 T---T---TT-----------------------------T
i Neomonachus_schauinslandi.NINY01007774.1              C 0 I 5
s Neophocaena_asiaeorientalis.KZ688543.1                  3949993  5 -   4490290 T---T---GT-----------------------------T
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 I 5
s Noctilio_leporinus.NocLep_scaffold_12062                  48269  5 +     94413 T---G---GT-----------------------------T
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 I 5
s Nomascus_annamensis.k141_1439838                           1929  5 +      3718 T---T---AC-----------------------------T
i Nomascus_annamensis.k141_1439838                      I 22 I 5
s Nomascus_concolor.k141_226614                               289  5 -      5092 T---T---AC-----------------------------T
i Nomascus_concolor.k141_226614                         C 0 I 5
s Nomascus_gabriellae.k141_642452                            1072  5 +      2851 T---T---AC-----------------------------T
i Nomascus_gabriellae.k141_642452                       C 0 I 5
s Nomascus_siki_a.k141_595747                                  1710  5 +      4512 T---T---AC-----------------------------T
i Nomascus_siki_a.k141_595747                             C 0 I 5
s Nyctereutes_procyonoides.CAJHUB010000786.1                29180  5 +   3668941 T---T---TT-----------------------------T
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 I 5
s Nycticebus_bengalensis.LG16                            65566171  5 -  95554990 T---T---AA-----------------------------T
i Nycticebus_bengalensis.LG16                           C 0 I 2
s Nycticebus_coucang.k141_2051882                            2900  5 +      6470 T---T---AA-----------------------------T
i Nycticebus_coucang.k141_2051882                       C 0 I 2
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65668509  5 +  89412551 T---T---AA-----------------------------T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 I 2
s Ochotona_princeps.JH802095.1                            4995061  5 -  23139505 T---T---AT-----------------------------T
i Ochotona_princeps.JH802095.1                          C 0 I 5
s Octodon_degus.JH651621.1                                3684604  5 +  10294119 T---T---AC-----------------------------T
i Octodon_degus.JH651621.1                              C 0 I 8
s Odobenus_rosmarus.KB229369.1                             677888  5 -   3126709 T---T---TT-----------------------------T
i Odobenus_rosmarus.KB229369.1                          C 0 I 5
s Odocoileus_virginianus.KZ101650.1                       1078679  5 +   1425656 C---T---GT-----------------------------T
i Odocoileus_virginianus.KZ101650.1                     C 0 I 5
s Okapia_johnstoni.LVCL01S0017931.1                         35975  5 +     78940 T---T---GT-----------------------------T
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 I 5
s Ondatra_zibethicus.OndZib_scaffold_6821                  124081  5 +    145789 C---G---TT-----------------------------C
i Ondatra_zibethicus.OndZib_scaffold_6821               I 3 I 258
s Onychomys_torridus.OnyTor_scaffold_12578                  35852  5 +     62360 C---G---GC-----------------------------T
i Onychomys_torridus.OnyTor_scaffold_12578              I 3 I 288
s Orcinus_orca.KB316965.1                                 7223676  5 -   7562323 T---T---GT-----------------------------T
i Orcinus_orca.KB316965.1                               C 0 I 5
s Oryctolagus_cuniculus.CM000803.1                      141875000  5 + 163896628 T---T---GT-----------------------------T
i Oryctolagus_cuniculus.CM000803.1                      C 0 I 10
s Otocyon_megalotis.JAEUCK010005121.1                      306468  5 -    505867 T---T---TT-----------------------------T
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 I 5
s Otolemur_crassicaudatus.k141_321880                       38069  5 +     38679 T---T---AA-----------------------------C
i Otolemur_crassicaudatus.k141_321880                   C 0 I 2
s Otolemur_garnettii.GL873528.1                          18007497  5 -  38779656 T---T---AA-----------------------------T
i Otolemur_garnettii.GL873528.1                         C 0 I 2
s Ovis_aries.CM001582.2                                 134076241  5 - 275406953 T---T---GT-----------------------------T
i Ovis_aries.CM001582.2                                 C 0 I 5
s Ovis_canadensis.OviCan_scaffold_6251                      77455  5 +    140051 T---T---AT-----------------------------T
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 I 5
s Pan_paniscus.AJFE02000033.1                                  45 10 -      1012 T---T---ACTACTA------------------------C
i Pan_paniscus.AJFE02000033.1                           n 65 C 0
s Pan_troglodytes.KZ622857.1                               326702 10 +    772158 T---T---ACTACTA------------------------C
i Pan_troglodytes.KZ622857.1                            I 44 I 521
s Panthera_onca.PanOnc_flattened_line_1615                  32703  5 +    295523 T---T---TT-----------------------------T
i Panthera_onca.PanOnc_flattened_line_1615              C 0 I 5
s Panthera_pardus.KV860323.1                              3636437  5 +  18214204 t---t---tt-----------------------------t
i Panthera_pardus.KV860323.1                            C 0 I 5
s Panthera_tigris.KE721879.1                              5026084  5 -   6340057 t---t---tt-----------------------------t
i Panthera_tigris.KE721879.1                            C 0 I 5
s Pantholops_hodgsonii.KE114631.1                         1065102  5 -   1292953 T---T---GT-----------------------------T
i Pantholops_hodgsonii.KE114631.1                       C 0 I 5
s Papio_anubis.CM001492.2                               188155308  5 - 188283584 T---T---AC-----------------------------T
i Papio_anubis.CM001492.2                               C 0 I 5
s Papio_cynocephalus.k141_883042                             3625  5 +      5367 T---T---AC-----------------------------T
i Papio_cynocephalus.k141_883042                        C 0 I 5
s Papio_hamadryas.Contig15                               47512696  5 +  47705337 T---T---AC-----------------------------T
i Papio_hamadryas.Contig15                              C 0 I 5
s Papio_kindae.k141_5458022                                 66674  5 -    104429 T---T---AC-----------------------------T
i Papio_kindae.k141_5458022                             C 0 I 5
s Papio_papio.k141_979496                                    5206  5 +     14967 T---T---AC-----------------------------T
i Papio_papio.k141_979496                               C 0 I 5
s Papio_ursinus.k141_1345919                                 1067  5 -      7628 T---T---AC-----------------------------T
i Papio_ursinus.k141_1345919                            C 0 I 5
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    114020  5 -    135482 T---T---TT-----------------------------T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 I 5
s Perodicticus_ibeanus.k141_117958                           4483  5 -     23713 T---T---AA-----------------------------T
i Perodicticus_ibeanus.k141_117958                      C 0 I 2
s Perodicticus_potto.k141_713187                            23792  5 -     27972 T---T---AA-----------------------------T
i Perodicticus_potto.k141_713187                        C 0 I 2
s Perognathus_longimembris.PerPac_flattened_line_22291      42640  5 -     45160 T---A---AT-----------------------------T
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 I 5
s Peromyscus_maniculatus.KI615518.1                       4949120  5 -   8017169 C---G---GT-----------------------------T
i Peromyscus_maniculatus.KI615518.1                     I 3 I 252
s Petromus_typicus.PetTyp_scaffold_33007                    11539  5 -     36578 T---T---GT-----------------------------T
i Petromus_typicus.PetTyp_scaffold_33007                C 0 I 9
s Phocoena_phocoena.PhoPho_flattened_line_11948            120293  5 -    122454 T---T---GT-----------------------------T
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 I 5
s Piliocolobus_badius.k141_1987485                           1094  5 -      5908 T---T---AC-----------------------------T
i Piliocolobus_badius.k141_1987485                      C 0 I 5
s Piliocolobus_gordonorum.k141_1270531                       1714  5 -     17985 T---T---AC-----------------------------T
i Piliocolobus_gordonorum.k141_1270531                  C 0 I 5
s Piliocolobus_kirkii.k141_929665                            1081  5 +      7694 T---T---AC-----------------------------T
i Piliocolobus_kirkii.k141_929665                       C 0 I 5
s Piliocolobus_tephrosceles.PDMG02000036.1               26739559  5 +  26888534 T---T---AC-----------------------------T
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 I 5
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            96464  5 +    112873 T---A---GT-----------------------------T
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             42691  5 -     61926 T---T---AC-----------------------------T
i Pithecia_albicans.k141_991845                         C 0 I 5
s Pithecia_chrysocephala.k141_159118                        24122  5 +     78826 T---T---AC-----------------------------T
i Pithecia_chrysocephala.k141_159118                    C 0 I 5
s Pithecia_hirsuta.k141_1152968                              8071  5 -     15800 T---T---AC-----------------------------T
i Pithecia_hirsuta.k141_1152968                         C 0 I 5
s Pithecia_mittermeieri.k141_2119203                        11269  5 -     16101 T---T---AC-----------------------------T
i Pithecia_mittermeieri.k141_2119203                    C 0 I 5
s Pithecia_pissinattii.k141_1102319                          4578  5 +      9673 T---T---AC-----------------------------T
i Pithecia_pissinattii.k141_1102319                     C 0 I 5
s Pithecia_pithecia.tarseq_313                           13473574  5 -  19735023 T---T---AC-----------------------------T
i Pithecia_pithecia.tarseq_313                          C 0 I 5
s Pithecia_vanzolinii.k141_831006                           12480  5 -     31692 T---T---AC-----------------------------T
i Pithecia_vanzolinii.k141_831006                       C 0 I 5
s Platanista_gangetica.PlaMin_flattened_line_72990           4361  5 +     21690 T---T---GT-----------------------------T
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 I 5
s Plecturocebus_bernhardi.k141_959214                       21915  5 +     44506 T---T---AC-----------------------------T
i Plecturocebus_bernhardi.k141_959214                   C 0 I 5
s Plecturocebus_brunneus.k141_498086                        22127  5 +     67491 T---T---AC-----------------------------T
i Plecturocebus_brunneus.k141_498086                    C 0 I 5
s Plecturocebus_caligatus.k141_2539816                      12366  5 -     98129 T---T---AC-----------------------------T
i Plecturocebus_caligatus.k141_2539816                  C 0 I 5
s Plecturocebus_cinerascens.k141_744510                     21966  5 +    147771 T---T---AC-----------------------------T
i Plecturocebus_cinerascens.k141_744510                 C 0 I 5
s Plecturocebus_cupreus.k141_1223294                        22221  5 -     23762 T---T---AC-----------------------------T
i Plecturocebus_cupreus.k141_1223294                    C 0 I 5
s Plecturocebus_dubius.k141_3565563                          2687  5 -     55515 T---T---AC-----------------------------T
i Plecturocebus_dubius.k141_3565563                     C 0 I 5
s Plecturocebus_grovesi.k141_242819                         22040  5 +    152463 T---T---AC-----------------------------T
i Plecturocebus_grovesi.k141_242819                     C 0 I 5
s Plecturocebus_hoffmannsi.k141_1595076                      8800  5 +      8943 T---T---AC-----------------------------T
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 I 5
s Plecturocebus_miltoni.k141_841561                         11762  5 +    134592 T---T---AC-----------------------------T
i Plecturocebus_miltoni.k141_841561                     C 0 I 5
s Plecturocebus_moloch.k141_890597                          22350  5 -     75465 T---T---AC-----------------------------T
i Plecturocebus_moloch.k141_890597                      C 0 I 5
s Pongo_abelii.NDHI03003816.1                              186245  5 -    373494 T---T---AC-----------------------------T
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19806893  5 +  19899266 T---T---AC-----------------------------T
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               4816  5 -     15069 T---T---AC-----------------------------T
i Presbytis_comata.k141_672698                          C 0 I 5
s Presbytis_mitrata.k141_860013                              4950  5 +     14865 T---T---AC-----------------------------T
i Presbytis_mitrata.k141_860013                         C 0 I 5
s Procavia_capensis.ProCapCap_scaffold_15315                76417  5 +     78963 T---T---AT-----------------------------T
i Procavia_capensis.ProCapCap_scaffold_15315            I 3 I 5
s Prolemur_simus.MPIZ01000048.1                           6847606  5 +  12164890 T---T---AT-----------------------------T
i Prolemur_simus.MPIZ01000048.1                         C 0 I 2
s Propithecus_coquerelli.NW_012147997.1                    666825  5 -   2312742 T---T---AT-----------------------------T
i Propithecus_coquerelli.NW_012147997.1                 C 0 I 2
s Propithecus_coronatus.k141_1353159                         2652  5 +     11805 T---T---AT-----------------------------T
i Propithecus_coronatus.k141_1353159                    C 0 I 2
s Propithecus_diadema.k141_577245                           41988  5 +     52369 T---T---GT-----------------------------T
i Propithecus_diadema.k141_577245                       C 0 I 2
s Propithecus_edwardsi.k141_1317105                         34378  5 -     44753 T---T---AT-----------------------------T
i Propithecus_edwardsi.k141_1317105                     C 0 I 2
s Propithecus_perrieri.k141_7554                            16298  5 +     27322 T---T---AT-----------------------------T
i Propithecus_perrieri.k141_7554                        C 0 I 2
s Propithecus_tattersalli.k141_907138                       15934  5 -     53241 T---T---AT-----------------------------T
i Propithecus_tattersalli.k141_907138                   C 0 I 2
s Propithecus_verreauxi.k141_158021                         38206  5 -     48185 T---T---AT-----------------------------T
i Propithecus_verreauxi.k141_158021                     C 0 I 2
s Psammomys_obesus.NESX01026517.1                           32989  5 +     77221 T---G---GT-----------------------------T
i Psammomys_obesus.NESX01026517.1                       I 3 I 285
s Pteronotus_parnellii.KE867983.1                            2833  5 -     27784 T---G---GT-----------------------------T
i Pteronotus_parnellii.KE867983.1                       C 0 I 5
s Pteronura_brasiliensis.PteBra_flattened_line_1343        244813  5 -    344369 T---T---TT-----------------------------T
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 I 5
s Pteropus_alecto.KB031157.1                             13244951  5 -  17261082 T---T---GC-----------------------------T
i Pteropus_alecto.KB031157.1                            C 0 I 5
s Pteropus_vampyrus.KN525959.1                             602901  5 -   3946241 T---T---GC-----------------------------T
i Pteropus_vampyrus.KN525959.1                          C 0 I 5
s Puma_concolor.QAVW01000427.1                          131532667  5 - 161321710 t---t---tt-----------------------------t
i Puma_concolor.QAVW01000427.1                          C 0 I 5
s Pygathrix_cinerea.k141_374971                             28934  5 +     56732 T---T---AC-----------------------------T
i Pygathrix_cinerea.k141_374971                         C 0 I 5
s Pygathrix_nigripes_b.ctg79                                 6805425  5 +   6970761 T---T---AC-----------------------------T
i Pygathrix_nigripes_b.ctg79                               C 0 I 5
s Pygathrix_nigripes_a.k141_101123                             4819  5 +     18040 T---T---AC-----------------------------T
i Pygathrix_nigripes_a.k141_101123                        C 0 I 5
s Rangifer_tarandus.RanTarSib_scaffold_24239                14756  5 +     68503 T---T---GT-----------------------------T
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 I 5
s Rattus_norvegicus.chr11                                13914366  5 +  90463843 T---G---GT-----------------------------T
i Rattus_norvegicus.chr11                               I 3 I 194
s Rhinolophus_sinicus.LVEH01000179.1                      1786763  5 +   2252614 T---T---GT-----------------------------T
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 I 5
s Rhinopithecus_bieti.k119_1391695                           1047  5 -      1866 T---T---AC-----------------------------T
i Rhinopithecus_bieti.k119_1391695                      C 0 I 5
s Rhinopithecus_roxellana.NC_044549.1                   206376704  5 - 206558726 T---T---AC-----------------------------T
i Rhinopithecus_roxellana.NC_044549.1                   C 0 I 5
s Rhinopithecus_strykeri.ctg4                            44855604  5 -  45163003 T---T---AC-----------------------------T
i Rhinopithecus_strykeri.ctg4                           C 0 I 5
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                18241  5 +    109198 T---T---GT-----------------------------T
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 I 5
s Saiga_tatarica.SaiTat_scaffold_82192                       6558  5 +     12214 T---T---GT-----------------------------T
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 I 5
s Saimiri_boliviensis.NW_024100938.1                     15671778  5 -  43202129 T---T---AC-----------------------------T
i Saimiri_boliviensis.NW_024100938.1                    C 0 I 5
s Saimiri_cassiquiarensis.k141_808270                        3695  5 +     34089 T---T---AC-----------------------------T
i Saimiri_cassiquiarensis.k141_808270                   C 0 I 5
s Saimiri_macrodon.k141_2087127                              3636  5 -     60842 T---T---AC-----------------------------T
i Saimiri_macrodon.k141_2087127                         C 0 I 5
s Saimiri_oerstedii.k141_841116                              3731  5 +     67014 T---T---AC-----------------------------T
i Saimiri_oerstedii.k141_841116                         C 0 I 5
s Saimiri_sciureus.k141_1947592                              3709  5 +     60816 T---T---AC-----------------------------T
i Saimiri_sciureus.k141_1947592                         C 0 I 5
s Saimiri_ustus.k141_1282476                                 3646  5 -     76454 T---T---AC-----------------------------T
i Saimiri_ustus.k141_1282476                            C 0 I 5
s Sapajus_apella.ctg10                                   17340372  5 -  30362882 T---T---AC-----------------------------T
i Sapajus_apella.ctg10                                  C 0 I 5
s Sapajus_macrocephalus.k141_966464                         19731  5 -     62485 T---T---AC-----------------------------T
i Sapajus_macrocephalus.k141_966464                     C 0 I 5
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   30323  5 -    114521 T---T---GT-----------------------------T
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 I 5
s Semnopithecus_entellus.k141_1572367                        2431  5 +     15331 T---T---AC-----------------------------T
i Semnopithecus_entellus.k141_1572367                   C 0 I 5
s Semnopithecus_hypoleucos.k141_761524                       7828  5 +     20762 T---T---AC-----------------------------T
i Semnopithecus_hypoleucos.k141_761524                  C 0 I 5
s Semnopithecus_johnii.k141_785014                         117826  5 +    130994 T---T---AC-----------------------------T
i Semnopithecus_johnii.k141_785014                      C 0 I 5
s Semnopithecus_priam.k141_410937                           36617  5 +     46263 T---T---AC-----------------------------T
i Semnopithecus_priam.k141_410937                       C 0 I 5
s Semnopithecus_schistaceus.k141_387461                     29731  5 +     42640 T---T---AC-----------------------------T
i Semnopithecus_schistaceus.k141_387461                 C 0 I 5
s Semnopithecus_vetulus.k141_1143185                        12775  5 +     30600 T---T---AC-----------------------------T
i Semnopithecus_vetulus.k141_1143185                    C 0 I 5
s Sigmodon_hispidus.SigHis_scaffold_11332                   98624  5 -    120886 A---G---GT-----------------------------T
i Sigmodon_hispidus.SigHis_scaffold_11332               I 3 I 717
s Solenodon_paradoxus.SolPar_flattened_line_1012            16943  4 +    739146 T---T---GC------------------------------
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 I 3
s Sorex_araneus.JH798170.1                               17749562  5 -  27805282 T---T---GT-----------------------------C
i Sorex_araneus.JH798170.1                              C 0 I 5
s Spermophilus_dauricus.KZ294190.1                        2238813  4 +   2842873 ----T---AT-----------------------------T
i Spermophilus_dauricus.KZ294190.1                      C 0 I 5
s Spilogale_gracilis.SpiGra_flattened_line_905             233351  5 -    276980 T---T---TT-----------------------------T
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 I 5
s Suricata_suricatta.SurSur_flattened_line_20339            25906  4 +     62062 T---T----T-----------------------------T
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 I 5
s Sus_scrofa.CM000824.4                                 189270828  2 + 218635234 ---------T-----------------------------T
i Sus_scrofa.CM000824.4                                 C 0 I 5
s Symphalangus_syndactylus.tarseq_24                        13989  5 -  13920577 T---T---AC-----------------------------T
i Symphalangus_syndactylus.tarseq_24                    C 0 I 5
s Tadarida_brasiliensis.TadBra_scaffold_145589               4996  5 -      6213 T---G---GT-----------------------------T
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 I 45
s Tamandua_tetradactyla.TamTet_scaffold_26877               13692  5 +     45698 T---T---GG-----------------------------T
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 I 5
s Tapirus_indicus.TapInd_scaffold_176                      805694  5 +   1148477 T---T---GC-----------------------------T
i Tapirus_indicus.TapInd_scaffold_176                   C 0 I 5
s Tapirus_terrestris.TapTer_scaffold_14939                  56351  5 +     99546 T---T---GC-----------------------------T
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 I 5
s Tarsius_lariang.k141_609102                               25513  5 +     42269 T---T---AT-----------------------------T
i Tarsius_lariang.k141_609102                           C 0 I 5
s Tarsius_wallacei.k141_48636                               58829  5 +     65473 T---T---AT-----------------------------T
i Tarsius_wallacei.k141_48636                           C 0 I 5
s Theropithecus_gelada.CM009951.1                       194006835  5 - 194193292 T---T---AC-----------------------------T
i Theropithecus_gelada.CM009951.1                       C 0 I 5
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             38334  8 -     47444 T---TATTGT-----------------------------T
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 I 9
s Tolypeutes_matacus.TolMat_scaffold_269431                  4555  5 +      6782 T---T---GT-----------------------------T
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 I 5
s Tonatia_saurophila.TonSau_scaffold_3334                  134839  5 -    259118 C---G---CT-----------------------------T
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 I 5
s Trachypithecus_auratus.k141_738098                        25938  5 +     38948 T---T---AC-----------------------------T
i Trachypithecus_auratus.k141_738098                    C 0 I 5
s Trachypithecus_crepusculus.k141_1588528                   19665  5 -     32910 T---T---AC-----------------------------T
i Trachypithecus_crepusculus.k141_1588528               C 0 I 5
s Trachypithecus_cristatus.k141_1011511                      1052  5 -     12939 T---T---AC-----------------------------T
i Trachypithecus_cristatus.k141_1011511                 C 0 I 5
s Trachypithecus_francoisi.k141_768164                        987  5 -     14244 T---T---AC-----------------------------T
i Trachypithecus_francoisi.k141_768164                  C 0 I 5
s Trachypithecus_geei.k141_670367                           42385  5 -     54611 T---T---AC-----------------------------T
i Trachypithecus_geei.k141_670367                       C 0 I 5
s Trachypithecus_germaini.k141_868450                         191  5 -     11566 T---T---AC-----------------------------T
i Trachypithecus_germaini.k141_868450                   C 0 I 5
s Trachypithecus_hatinhensis.k141_504423                     2363  5 -     15592 T---T---AC-----------------------------T
i Trachypithecus_hatinhensis.k141_504423                C 0 I 5
s Trachypithecus_laotum.k141_760702                          1020  5 +     14371 T---T---AC-----------------------------T
i Trachypithecus_laotum.k141_760702                     C 0 I 5
s Trachypithecus_leucocephalus.k141_283605                  50772  5 +     51589 T---T---AC-----------------------------T
i Trachypithecus_leucocephalus.k141_283605              C 0 I 5
s Trachypithecus_melamera.k141_238507                       13953  5 +     14732 T---T---AC-----------------------------T
i Trachypithecus_melamera.k141_238507                   C 0 I 5
s Trachypithecus_obscurus.k141_1115109                       4425  5 -     28054 T---T---AC-----------------------------T
i Trachypithecus_obscurus.k141_1115109                  C 0 I 5
s Trachypithecus_phayrei.ctg3                            44659225  5 -  44834318 T---T---AC-----------------------------T
i Trachypithecus_phayrei.ctg3                           C 0 I 5
s Trachypithecus_pileatus.k141_1022309                       1528  5 +     13828 T---T---AC-----------------------------T
i Trachypithecus_pileatus.k141_1022309                  C 0 I 5
s Tragulus_javanicus.TraJav_scaffold_14717                   4135  4 +     90398 ----T---GT-----------------------------T
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 I 5
s Trichechus_manatus.JH594618.1                          16081543  5 +  31416278 C---T---GT-----------------------------T
i Trichechus_manatus.JH594618.1                         I 3 I 5
s Tupaia_chinensis.KB320831.1                             2791781  5 -   3938065 T---T---GT-----------------------------T
i Tupaia_chinensis.KB320831.1                           C 0 I 5
s Tupaia_tana.TupTan_flattened_line_68454                    4049  5 +     13056 T---T---GT-----------------------------T
i Tupaia_tana.TupTan_flattened_line_68454               C 0 I 5
s Tursiops_truncatus.MRVK01000923.1                      69312393  5 -  96451834 T---T---GT-----------------------------T
i Tursiops_truncatus.MRVK01000923.1                     C 0 I 5
s Uropsilus_gracilis.UroGra_scaffold_139357                   849  5 +      2103 T---T---GT-----------------------------T
i Uropsilus_gracilis.UroGra_scaffold_139357             C 0 I 5
s Varecia_rubra.k141_432109                                  4310  5 -     20643 T---T---AT-----------------------------T
i Varecia_rubra.k141_432109                             C 0 I 2
s Varecia_variegata.k141_775891                             23851  5 -     33872 T---T---AT-----------------------------T
i Varecia_variegata.k141_775891                         C 0 I 2
s Vicugna_pacos.KN269600.1                                1523631  5 -   2331223 T---T---GT-----------------------------T
i Vicugna_pacos.KN269600.1                              C 0 I 5
s Vulpes_lagopus.VulLag_flattened_line_2045                136553  5 -    281493 T---T---TT-----------------------------T
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 I 5
s Xerus_inauris.XerIna_scaffold_7898                       125918  4 -    134049 ----T---GT-----------------------------T
i Xerus_inauris.XerIna_scaffold_7898                    C 0 I 5
s Zalophus_californianus.ZalCal_flattened_line_4097        212623  5 -    227762 T---T---TT-----------------------------T
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 I 5
s Ziphius_cavirostris.ZipCav_flattened_line_127025           5888  5 -      8775 T---T---GT-----------------------------T
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 I 5
e Dinomys_branickii.DinBra_scaffold_1996                   156356 54 +    228994 I
e Ursus_maritimus.KK498671.1                              6513131  3 +  28682327 I
e Orycteropus_afer.OryAfe_flattened_line_13509              43378 16 -     66828 I
e Microgale_talazaci.MicTal_scaffold_34660                  30638 409 -     48017 I
e Manis_pentadactyla.KN017078.1                             35015 87 +     58827 I
e Manis_javanica.JSZB01003966.1                            144940 87 +    252755 I
e Elephantulus_edwardii.JH947210.1                        7804622 10712 +  15467074 I
e Echinops_telfairi.JH980316.1                           22994192 422 -  44670279 I
e Ailuropoda_melanoleuca.LNAT01000321.1                  10655655  3 +  23371972 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     14107 296 -     20485 I
e Hylobates_pileatus_a.tarseq_592                             33311  5 -     60944 I
e Nomascus_siki_b.tarseq_80                             24175  0 -  18771707 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               10985 40 +    209709 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCTAAG
s Acinonyx_jubatus.LLWD01000356.1                         2032336 40 +   3721120 tGCAG-TTA-T-AT-----ACCTG--C---C-Tccca-----a-attataa-------a------a----------a-acaaag
i Acinonyx_jubatus.LLWD01000356.1                       I 5 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    111639 43 -    189883 ATCAG-TGGCA-AC-----T-C-TG-GCAGC-TCACA-----A-ATTATGG-A------------A----------G-TCACAG
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 311 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10655658 40 +  23371972 TGCAG-TTA-A-AT-----AGTTG--G---T-TCCCA-----A-ATTATGA-A------------A----------G-CCAAAG
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 3 C 0
s Ailurus_fulgens.LNAC01000003.1                          7092830 24 -  16596857 TGCAG-TTA-A-AT-----ACTTG--G---G-TCCCA-----A-----------------------------------------
i Ailurus_fulgens.LNAC01000003.1                        I 5 I 9
s Allactaga_bullata.AllBul_scaffold_70162                   12001 40 -     22067 TACAG-TGA-A-AC-----TTA-TG-G---C-CCCCA-----A-ATTATAA---T----------A----------T-CCAAAG
i Allactaga_bullata.AllBul_scaffold_70162               I 5 C 0
s Allenopithecus_nigroviridis.k141_2469532                    344 40 -     60446 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCAAG
i Allenopithecus_nigroviridis.k141_2469532              I 5 C 0
s Allochrocebus_lhoesti.k141_3566948                         1062 39 -     29318 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCAA-
i Allochrocebus_lhoesti.k141_3566948                    I 5 C 0
s Allochrocebus_preussi.k141_21781                           1201 39 +      1343 TGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCAA-
i Allochrocebus_preussi.k141_21781                      I 5 N 0
s Allochrocebus_solatus.k141_371672                           956 39 -     80423 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCAA-
i Allochrocebus_solatus.k141_371672                     I 5 C 0
s Alouatta_belzebul.k141_1818029                             9250 40 -     18050 AGCAG-TGA-A-AC-----ACC-TG-T---C-TCCCA-----A-ATCATAA--------------A----------AGCCTAAG
i Alouatta_belzebul.k141_1818029                        I 5 C 0
s Alouatta_caraya.k141_5460                                 10340 40 -     11521 AGCAG-TGA-A-AC-----ACC-TG-T---C-TCCCA-----A-ATTATAA--------------A----------AGCCGAAG
i Alouatta_caraya.k141_5460                             I 5 C 0
s Alouatta_discolor.k141_811576                              9927 40 -     21359 AGCAG-TGA-A-AC-----ACC-TG-T---C-TCCCA-----A-ATCATAA--------------A----------AGCCTAAG
i Alouatta_discolor.k141_811576                         I 5 C 0
s Alouatta_juara.k141_298055                                 1223 40 +      1823 AGCAG-TGA-A-AC-----ACC-TG-T---C-TCCCA-----A-ATTATAA--------------A----------AGCCGAAG
i Alouatta_juara.k141_298055                            I 5 C 0
s Alouatta_macconnelli.k141_1331706                          9223 40 -     10438 AGCAG-TGA-A-AC-----ATC-TG-T---C-TCCCA-----A-ATTATAA--------------A----------AGCCGAAG
i Alouatta_macconnelli.k141_1331706                     I 5 C 0
s Alouatta_nigerrima.k141_2718643                            5879 40 +      7047 AGCAG-TGA-A-AC-----ATC-TG-T---C-TCCCA-----A-ATTATAA--------------A----------AGCCGAAG
i Alouatta_nigerrima.k141_2718643                       I 5 C 0
s Alouatta_palliata.k141_1316127                             9159 40 +     10410 AGCAG-TGA-A-AC-----ATC-TG-T---C-TCCCA-----A-ATTATAA--------------A----------AGCCGAAG
i Alouatta_palliata.k141_1316127                        I 5 C 0
s Alouatta_puruensis.k141_1284840                            2969 40 -      4927 AGCAG-TGA-A-AC-----ACC-TG-T---C-TCCCA-----A-ATTATAA--------------A----------AGCCGAAG
i Alouatta_puruensis.k141_1284840                       I 5 C 0
s Alouatta_seniculus.k141_990213                             5898 40 +      6429 AGCAG-TGA-A-AC-----ACC-TG-T---C-TCCCA-----A-ATTATAA--------------A----------AGCCGAAG
i Alouatta_seniculus.k141_990213                        I 5 C 0
s Ammotragus_lervia.NIVO01013474.1                        3519109 40 +   4113121 CACAG-TTA-A-AT-----ATCTG--G---C-TCCCA-----A-AATACGA-A------------A----------G-GCAAAC
i Ammotragus_lervia.NIVO01013474.1                      I 5 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      389279 40 -    631301 GGCAG-TTA-A-AT-----ACC-T-GG---C-TCCCA-----A-ATTGAAA-A------------A----------G-CCAAAA
i Anoura_caudifer.AnoCau_scaffold_422                   I 5 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            29692 40 +     33004 TGCAG-TTA-A-AT-----ATCTG--G---C-TTCCA-----A-AATATGA-A------------A----------G-GCAAAC
i Antilocapra_americana.AntAmePen_scaffold_42841        I 5 C 0
s Aotus_azarae.k141_3170768                                 61609 40 +     78111 AGCAG-TGA-A-AC-----ACC-TG-T---C-TCCCA-----A-ATTATAA--------------A----------AACCAAAG
i Aotus_azarae.k141_3170768                             I 5 C 0
s Aotus_griseimembra.k141_3275623                            4550 40 +     22701 AGCAG-TGA-A-AC-----ACC-TG-T---C-TCCCT-----A-ATTATAA--------------A----------AACCAAAG
i Aotus_griseimembra.k141_3275623                       I 5 C 0
s Aotus_nancymaae.KZ196176.1                              5748507 40 +   9889416 AGCAG-TGA-A-AC-----ACC-TG-T---C-TCCCA-----A-ATTATAA--------------A----------aaccaaag
i Aotus_nancymaae.KZ196176.1                            I 5 C 0
s Aotus_trivirgatus.k141_1740727                             5092 40 -    104377 AGCAG-TGA-A-AC-----ACC-TG-T---C-TCCCA-----A-ATTATAA--------------A----------AACCAAAG
i Aotus_trivirgatus.k141_1740727                        I 5 C 0
s Aotus_vociferans.k141_718647                               5098 40 +     23246 AGCAG-TGA-A-AC-----ACC-TG-T---C-TCCCA-----A-ATTATAA--------------A----------AACCAAAG
i Aotus_vociferans.k141_718647                          I 5 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     2759 40 +      5067 CATGA-TTT-A-AA-----TTC-TG-G---T-TCCCA-----A-GTTAGAA-A------------A----------G-CCAGGG
i Aplodontia_rufa.AprRuf_scaffold_156013                I 5 C 0
s Arctocebus_calabarensis.k141_1161114                      17290 17 +     17483 ---------------------------------cctt-----a-ttt---a--------------a----------agtcaca-
i Arctocebus_calabarensis.k141_1161114                  I 16 N 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 7682 40 -     29036 AGCAG-TTA-A-AT-----GCC-C-GG---C-TCCCA-----A-ATTGAAA-A------------A----------G-CCAAAA
i Artibeus_jamaicensis.ArtJam_scaffold_41619            I 5 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9538355 40 +  39197703 AGCAG-TGA-A-AC-----ACC-TG-T---C-TCCCA-----A-ATTATAA--------------A----------AGCCAAAG
i Ateles_geoffroyi_b.tarseq_2582                           I 5 C 0
s Ateles_belzebuth.k141_1348307                             59626 40 +     85812 AGCAG-TGA-A-AC-----ACC-TG-T---C-TCCCA-----A-ATTATAA--------------A----------AGCCAAAG
i Ateles_belzebuth.k141_1348307                         I 5 C 0
s Ateles_chamek.k141_1072810                                10638 40 +     89302 AGCAG-TGA-A-AC-----ACC-TG-T---C-TCCCA-----A-ATTATAA--------------A----------AGCCAAAG
i Ateles_chamek.k141_1072810                            I 5 C 0
s Ateles_geoffroyi_a.k141_1300742                             15143 40 -     58268 AGCAG-TGA-A-AC-----ACC-TG-T---C-TCCCA-----A-ATTATAA--------------A----------AGCCAAAG
i Ateles_geoffroyi_a.k141_1300742                         I 5 C 0
s Ateles_marginatus.k141_899112                             63134 40 +    119057 AGCAG-TGA-A-AC-----ACC-TG-T---C-TCCCA-----A-ATTATAA--------------A----------AGCCAAAG
i Ateles_marginatus.k141_899112                         I 5 C 0
s Ateles_paniscus.k141_1631200                               5103 40 -     25888 AGCAG-TGA-A-AC-----ACC-TG-T---C-TCCCA-----A-ATTATAA--------------A----------AGCCAAAG
i Ateles_paniscus.k141_1631200                          I 5 C 0
s Avahi_laniger.k141_2840928                                 5730 37 -     16375 TGTAA-TTA-A-AC-----ATC-TG-G---C-TCCCA-----A-ATT---G--------------A----------AGCCAAAG
i Avahi_laniger.k141_2840928                            I 2 C 0
s Avahi_peyrierasi.k141_2689020                              2050 37 +      2719 TGTAA-TTA-A-AC-----ATC-TG-G---C-TCCCA-----A-ATT---G--------------A----------AGCCAAAG
i Avahi_peyrierasi.k141_2689020                         I 2 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26379122 40 +  51448160 TGCAG-TTA-A-AT-----ATCTG--G---C-TCCCA-----A-AATATGA-A------------A----------G-CCAAAC
i Balaenoptera_acutorostrata.KI537095.1                 I 5 C 0
s Balaenoptera_bonaerensis.DF502048.1                        4354 40 -     13118 TGCAG-TTA-A-AT-----ATCTG--G---C-TCCCA-----A-AATATGA-A------------A----------G-CCAAAC
i Balaenoptera_bonaerensis.DF502048.1                   I 5 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   42172 40 -     72089 CACAG-TTA-A-AT-----ATCTG--G---C-TCCCA-----A-AATACGA-A------------A----------G-GCAAAC
i Beatragus_hunteri.BeaHun_scaffold_21644               I 5 C 0
s Bison_bison.KN264915.1                                  6558483 40 +   6870073 tacag-tta-a-at-----atctG--G---C-TCCCA-----A-AATATGA-A------------A----------G-GCAAAC
i Bison_bison.KN264915.1                                I 5 C 0
s Bos_indicus.CM003021.1                                138138709 40 - 161108492 TGCAG-TTA-A-AT-----ATCTG--G---C-TCCCA-----A-AATANGA-A------------A----------G-GCAAAC
i Bos_indicus.CM003021.1                                I 5 C 0
s Bos_mutus.JH883513.1                                     571161 40 -    998990 TGCAG-TTA-A-AT-----ATCTG--G---C-TCCCA-----A-AATATGA-A------------A----------C-GCAAAC
i Bos_mutus.JH883513.1                                  I 70 C 0
s Bos_taurus.CM000177.6                                 136294442 40 - 158972876 TGCAG-TTA-A-AT-----ATCTG--G---C-TCCCA-----A-AATATGA-A------------A----------G-GCAAAC
i Bos_taurus.CM000177.6                                 I 5 C 0
s Bubalus_bubalis.KI419065.1                              1230209 23 -   1914593 TGCAG-TTA-A-AT-----ATCTG--G---C-TCCCA-----------------------------------------------
i Bubalus_bubalis.KI419065.1                            I 5 I 16
s Cacajao_ayresi.k141_724503                               112996 40 -    171031 AGCAG-TGA-A-AC-----ACC-TG-T---C-TCCCA-----A-ATTATAA--------------A----------AGCCAAAG
i Cacajao_ayresi.k141_724503                            I 5 C 0
s Cacajao_calvus.k141_96166                                 12024 40 +    125063 AGCAG-TGA-A-AC-----ACC-TG-T---C-TCCCA-----A-ATTATAA--------------A----------AGCCAAAG
i Cacajao_calvus.k141_96166                             I 5 C 0
s Cacajao_hosomi.k141_303789                                14069 40 -    216513 AGCAG-TGA-A-AC-----ACC-TG-T---C-TCCCA-----A-ATTATAA--------------A----------AGCCAAAG
i Cacajao_hosomi.k141_303789                            I 5 C 0
s Cacajao_melanocephalus.k141_1160263                        6609 40 -    134917 AGCAG-TGA-A-AC-----ACC-TG-T---C-TCCCA-----A-ATTATAA--------------A----------AGCCAAAG
i Cacajao_melanocephalus.k141_1160263                   I 5 C 0
s Camelus_bactrianus.KN276303.1                           3218534 40 -   8989139 TGCAG-TTA-T-AT-----ACCTG--G---C-tctca-----a-aatatga-------a------a----------a-tcaaag
i Camelus_bactrianus.KN276303.1                         I 5 C 0
s Camelus_dromedarius.KN271192.1                           396239 40 -  15254737 TGCAG-TTA-T-AT-----ACCTG--G---c-tctca-----a-aataaga-------a------a----------a-tcaaag
i Camelus_dromedarius.KN271192.1                        I 5 C 0
s Camelus_ferus.KB016973.1                                2971972 40 +   6889770 TGCAG-TTA-T-AT-----ACCTG--G---C-tctca-----a-aatatga-------a------a----------a-tcaaag
i Camelus_ferus.KB016973.1                              I 5 C 0
s CanFam4.chr31                                          11517508 40 +  39901454 TGCAG-TTT-A-AT-----ATCTG--G---C-TCCCA-----A-ATTATGA-A------------A----------G-TGAAAG
i CanFam4.chr31                                         I 5 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   12533 40 +     87036 TGCAG-TTT-A-AT-----ATCTG--G---C-TCCCA-----A-ATTATGA-A------------A----------G-TGAAAG
i Canis_lupus_VD.CanFam_VD_scaffold_16982               I 5 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11264173 40 -  35597290 TGCAG-TTT-A-AT-----ATCTG--G---C-TCCCA-----A-ATTATGA-A------------A----------G-TGAAAG
i Canis_lupus_dingo.QKWQ01001993.1                      I 5 C 0
s Canis_lupus_familiaris.chr31                           11086705 40 +  39895921 TGCAG-TTT-A-AT-----ATCTG--G---C-TCCCA-----A-ATTATGA-A------------A----------G-TGAAAG
i Canis_lupus_familiaris.chr31                          I 5 C 0
s Canis_lupus_orion.HG994411.1                           16453724 40 -  44759192 TGCAG-TTT-A-AT-----ATCTG--G---C-TCCCA-----A-ATTATGA-A------------A----------G-TGAAAG
i Canis_lupus_orion.HG994411.1                          I 5 C 0
s Capra_aegagrus.CM003214.1                              21324185 40 + 157394656 CACAG-TTA-A-AT-----ATCTG--G---C-TCCCA-----A-AATACGA-A------------A----------G-GCAAAC
i Capra_aegagrus.CM003214.1                             I 5 C 0
s Capra_hircus.CM004562.1                               135705412 40 - 157403528 CACAG-TTA-A-AT-----ATCTG--G---C-TCCCA-----A-AATACGA-A------------A----------G-GCAAAC
i Capra_hircus.CM004562.1                               I 5 C 0
s Capromys_pilorides.CapPil_scaffold_979108                  1014 22 -      1248 --------------------------------TCTCA-----A-ATAATAA-A------------A----------G-CAAAAG
i Capromys_pilorides.CapPil_scaffold_979108             I 8 C 0
s Carlito_syrichta.NW_007248099.1                          308039 40 +    345090 TGCAG-CTA-G-AC-----ATC-TT-G---C-TTCCA-----A-ATTACAA--------------A----------AGCCAAAG
i Carlito_syrichta.NW_007248099.1                       I 5 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               58480 40 +     67245 GGCAG-TTA-A-AT-----GCC-T-CG---C-TCCCA-----A-ATTGAAA-A------------A----------G-CCAAAA
i Carollia_perspicillata.CarPer_scaffold_4436           I 5 C 0
s Castor_canadensis.CasCan_scaffold_47037                   29702 27 +     33760 ---------------------C-TG-G---C-TCTTA-----G-ATTATAA-A------------G----------G-CTGAAG
i Castor_canadensis.CasCan_scaffold_47037               I 7 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   157745 40 -    276539 TGTGG-TTA-A-AT-----ATCTG--G---C-TCCCA-----A-AATATGA-A------------A----------G-CCAAAA
i Catagonus_wagneri.CatWag_scaffold_1305                I 5 C 0
s Cavia_aperea.AVPZ01000278.1                            15785644 22 -  24422027 --------------------------------TCCCA-----A-ATTATAA-A------------A----------G-CAAGAA
i Cavia_aperea.AVPZ01000278.1                           I 9 C 0
s Cavia_porcellus.DS562889.1                             15797578 22 -  24440124 --------------------------------TCCCA-----A-ATTATAA-A------------A----------G-CAAGAA
i Cavia_porcellus.DS562889.1                            I 9 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       175769 22 +    436027 --------------------------------TCCCA-----A-ATTATAA-A------------A----------G-CAAGAA
i Cavia_tschudii.CavTsc_scaffold_488                    I 9 C 0
s Cebus_albifrons.Contig22                               18889839 40 -  29618158 AGCAG-TCA-A-AC-----ACC-TG-T---C-TCCCA-----A-ACTATAA--------------A----------AGCCAAAG
i Cebus_albifrons.Contig22                              I 5 C 0
s Cebus_olivaceus.k141_93739                                 7383 40 -     26817 AGCAG-TCA-A-AC-----ACC-TG-T---C-TCCCA-----A-ACTATAA--------------A----------AGCCAAAG
i Cebus_olivaceus.k141_93739                            I 5 C 0
s Cebus_unicolor.k141_239009                                11623 40 +     25043 AGCAG-TCA-A-AC-----ACC-TG-T---C-TCCCA-----A-ACTATAA--------------A----------AGCCAAAG
i Cebus_unicolor.k141_239009                            I 5 C 0
s Cephalopachus_bancanus.k141_702587                         7072 40 +     21754 TGCAG-TTA-G-AC-----ATC-TT-G---C-TTCCA-----A-ATTATAA--------------A----------AGCCTAAG
i Cephalopachus_bancanus.k141_702587                    I 5 C 0
s Ceratotherium_simum.JH767818.1                          4362848 40 +   7569818 TGCAG-TTG-A-AT-----ATC-T-GG---C-TCCCA-----A-ATTATAA-A------------A----------G-CCAAAG
i Ceratotherium_simum.JH767818.1                        I 5 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         2600 40 -      9338 TGCAG-TTG-A-AT-----ATC-T-GG---C-TCCCA-----A-ATTATAA-A------------A----------G-CCAAAG
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    I 5 C 0
s Cercocebus_atys.KQ010443.1                              6554279 40 +   6739814 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCAAG
i Cercocebus_atys.KQ010443.1                            I 5 C 0
s Cercocebus_chrysogaster.k141_2328246                      25756 40 +     60454 AGCAG-TGA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCAAG
i Cercocebus_chrysogaster.k141_2328246                  I 5 C 0
s Cercocebus_lunulatus.k141_4634644                           961 40 -     21101 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCAAG
i Cercocebus_lunulatus.k141_4634644                     I 5 C 0
s Cercocebus_torquatus.k141_3969582                         58271 40 -    107033 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCAAG
i Cercocebus_torquatus.k141_3969582                     I 5 C 0
s Cercopithecus_ascanius.k141_4123525                        1163 40 -     17608 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCACG
i Cercopithecus_ascanius.k141_4123525                   I 5 C 0
s Cercopithecus_cephus.k141_598190                          28658 40 +     30494 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCAAG
i Cercopithecus_cephus.k141_598190                      I 5 C 0
s Cercopithecus_diana.k141_2980617                          57504 40 -     59240 AGCAG-TTA-A-AT-----ACC-TG-A---C-TCTCA-----A-ATTATAA--------------A----------AGCCCAAG
i Cercopithecus_diana.k141_2980617                      I 5 C 0
s Cercopithecus_hamlyni.k141_129805                          1205 40 +     16677 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCAAG
i Cercopithecus_hamlyni.k141_129805                     I 5 C 0
s Cercopithecus_lowei.k141_623764                           23363 40 +     35983 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCAAG
i Cercopithecus_lowei.k141_623764                       I 5 C 0
s Cercopithecus_albogularis.ctg51                              11989891 40 +  12117833 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCAAG
i Cercopithecus_albogularis.ctg51                             I 5 C 0
s Cercopithecus_mona.ctg12                               46476649 40 +  46592721 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCAAG
i Cercopithecus_mona.ctg12                              I 5 C 0
s Cercopithecus_neglectus.k141_2078027                      40200 40 -     45581 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCAAG
i Cercopithecus_neglectus.k141_2078027                  I 5 C 0
s Cercopithecus_nictitans.k141_1129315                       1206 40 +     35577 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCAAG
i Cercopithecus_nictitans.k141_1129315                  I 5 C 0
s Cercopithecus_petaurista.k141_64532                         982 40 -     25661 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCACG
i Cercopithecus_petaurista.k141_64532                   I 5 C 0
s Cercopithecus_pogonias.k141_3109732                         960 40 -     17744 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCAAG
i Cercopithecus_pogonias.k141_3109732                   I 5 C 0
s Cercopithecus_roloway.k141_2263608                        20569 40 +     37128 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCAAG
i Cercopithecus_roloway.k141_2263608                    I 5 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           1794 40 -      6963 TGCAG-TTA-A-GT-----AAA-TC-G---C-TCCCA-----A-ATACTAA-A------------A----------G-CCAAAG
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      I 5 C 0
s Cheirogaleus_major.k141_1157592                           58027 37 -     68416 TGTGG-TTA-A-AC-----ATC-TG-G---C-TCCCA-----A-ACT---G--------------A----------AGCCAAAG
i Cheirogaleus_major.k141_1157592                       I 2 C 0
s Cheirogaleus_medius.k141_133808                            7070 37 +     13308 TGTGG-TTA-A-AC-----ATC-TG-G---C-TCCCA-----A-ACT---G--------------A----------AGCCAAAG
i Cheirogaleus_medius.k141_133808                       I 2 C 0
s Cheracebus_lucifer.k141_619653                             4639 40 -     18223 AGCAG-TGA-A-AC-----ACC-CA-T---C-TCCCA-----A-ATTATAA--------------A----------AGCCAAAG
i Cheracebus_lucifer.k141_619653                        I 5 C 0
s Cheracebus_lugens.k141_203936                             21662 40 +     25473 AGCAG-TGA-A-AC-----ACC-CA-T---C-TCCCA-----A-ATTATAA--------------A----------AGCCAAAG
i Cheracebus_lugens.k141_203936                         I 5 C 0
s Cheracebus_regulus.k141_2128895                           40697 40 +     57117 AGCAG-TGA-A-AC-----ACC-CA-T---C-TCCCA-----A-ATTATAA--------------A----------AGCCAAAG
i Cheracebus_regulus.k141_2128895                       I 5 C 0
s Cheracebus_torquatus.k141_315545                          45376 40 +     54541 AGCAG-TGA-A-AC-----ACC-CA-T---C-TCCCA-----A-ATTATAA--------------A----------AGCCAAAG
i Cheracebus_torquatus.k141_315545                      I 5 C 0
s Chinchilla_lanigera.JH721867.1                         15960792 21 +  43084221 --------------------------------tctca-----a-atcATAA--------------A----------G-CCAAAG
i Chinchilla_lanigera.JH721867.1                        I 9 C 0
s Chiropotes_israelita.k141_1189915                         70198 40 +    196370 AGCAG-TGA-A-AC-----ACC-TA-T---C-TCCCA-----A-ATTATAA--------------A----------AGCCAAAG
i Chiropotes_israelita.k141_1189915                     I 5 C 0
s Chiropotes_sagulatus.k141_773804                          14378 40 +     40510 AGCAG-TGA-A-AC-----ACC-TA-T---C-TCCCA-----A-ATTATAA--------------A----------AGCCAAAG
i Chiropotes_sagulatus.k141_773804                      I 5 C 0
s Chlorocebus_aethiops.ctg22                             15138122 40 -  15256731 TGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCAAG
i Chlorocebus_aethiops.ctg22                            I 5 C 0
s Chlorocebus_pygerythrus.k141_1486215                      33169 40 -     53260 TGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCAAG
i Chlorocebus_pygerythrus.k141_1486215                  I 5 C 0
s Chlorocebus_sabaeus.CM001963.2                        101143733 40 + 101219884 TGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCAAG
i Chlorocebus_sabaeus.CM001963.2                        I 5 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                15466 40 -     21363 TGCAG-TTA-A-AT-----ACT-TG-G---C-TCCCA-----A-ATTATAA-A------------A----------A-CCAACA
i Choloepus_didactylus.ChoDid_scaffold_36182            I 5 C 0
s Choloepus_hoffmanni.KN194586.1                           760774 40 +    964067 TGCAG-TTA-A-AT-----ACT-TG-G---C-TCCCA-----A-ATTATAA-A------------A----------A-CCAACA
i Choloepus_hoffmanni.KN194586.1                        I 5 C 0
s Colobus_angolensis.KN985967.1                          10885499 40 +  10971483 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCAAG
i Colobus_angolensis.KN985967.1                         I 5 C 0
s Colobus_guereza.LG08                                  147663663 40 + 156195979 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCAAG
i Colobus_guereza.LG08                                  I 5 C 0
s Colobus_polykomos.k141_1406057                            15648 40 +     23629 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCAAG
i Colobus_polykomos.k141_1406057                        I 5 C 0
s Condylura_cristata.JH655880.1                          60611590 40 +  78930452 TAcca-taa-a-at-----atc-t--c---a-ttt---cca-a-tttataa-------a------t----------g-ccaaaa
i Condylura_cristata.JH655880.1                         I 5 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         38586 45 -     40477 TGCAG-TTA-A-ATATAATATC-T-GA---C-TCTCA-----A-ATTATAA-A------------A----------G-CCAAAG
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     I 5 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 277562 42 -    399297 TTCAG-TGA-A-AC-----TTT-CA-GCAGC-TGACA-----A-ATTATAA-A------------A----------T-T-GTAC
i Cricetomys_gambianus.CriGam_scaffold_949              I 264 C 0
s Cricetulus_griseus.LT883672.1                          53028237 43 +  72327488 TTCAG-TGA-A-AC-----gcc-tg-gcagc-tcaca-----a-attATAA-A------------A----------G-CCACAG
i Cricetulus_griseus.LT883672.1                         I 258 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             18686 13 -     19186 -----------------------------------------------ATAA-A------------A----------G-CTAAAT
i Crocidura_indochinensis.CroInd_scaffold_38409         I 86 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            50351 40 -     70449 TGCAG-TTA-T-AT-----ATCTG--T---C-TCCCA-----A-ATTATGA-A------------A----------A-CCAAAG
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 5 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  207207 40 -    956709 TGCAC-ATA-A-AC-----TTT-TG-A---A-TCCCA-----A-ATTATAA-A------------A----------G-CAAATG
i Ctenodactylus_gundi.CteGun_scaffold_447               I 5 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 29791 22 -     67205 --------------------------------TCCCA-----A-ATAATAA-A------------A----------G-CAGAAG
i Ctenomys_sociabilis.CteSoc_scaffold_19489             I 8 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                16800 22 +     26546 --------------------------------TCCCA-----A-ATTATAA-A------------A----------G-CAAAAG
i Cuniculus_paca.CunPac_flattened_line_16637            I 9 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             57892 22 -    236241 --------------------------------TCCCA-----A-ATTATAAG-------------A----------G-CAAAAG
i Dasyprocta_punctata.DasPun_flattened_line_634         I 9 C 0
s Dasypus_novemcinctus.JH568778.1                          182629 40 -   6883506 TGCAG-TTA-A-GT-----AAC-TG-G---T-TCCTA-----A-ACACTAA-A------------A----------G-TCAAAA
i Dasypus_novemcinctus.JH568778.1                       I 5 C 0
s Daubentonia_madagascariensis.ctg11                     16843886 37 +  31942871 TGCAG-TTA-A-AC-----ATC-TG-G---C-TCCCA-----A-ATT---G--------------A----------AGCCAAAG
i Daubentonia_madagascariensis.ctg11                    I 2 C 0
s Delphinapterus_leucas.KZ290064.1                       80035801 40 -  96802777 TGCAG-CTA-A-AT-----ATCTG--G---C-CCCCC-----A-AATATGA-A------------A----------G-CCAAAC
i Delphinapterus_leucas.KZ290064.1                      I 5 C 0
s Desmodus_rotundus.KZ672188.1                           18697789 40 -  18957592 TGCAG-TTA-A-AT-----ACG-G-GG---C-TCCCA-----A-ATTGAAA-A------------A----------G-CCAAGA
i Desmodus_rotundus.KZ672188.1                          I 5 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 321495 40 +    993696 TGCAG-TTG-A-AT-----ATC-T-GG---C-TCCCA-----A-ATTATAA-A------------A----------C-CCAAAG
i Dicerorhinus_sumatrensis.PEKH010003161.1              I 5 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   2147 40 +    151128 TGCAG-TTG-A-AT-----ATC-T-GG---C-TCCCA-----A-ATTATAA-A------------A----------G-CCAAAG
i Diceros_bicornis.DicBicMic_scaffold_9545              I 5 C 0
s Dipodomys_ordii.KN672545.1                              3655180 41 +   4240102 TATAGGTTA-A-AC-----TTT-TG-G---A-TCTGA-----A-ATTATAA-A------------A----------G-TCAAAC
i Dipodomys_ordii.KN672545.1                            I 5 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 26813 41 +     28912 TATAGGCTA-A-AC-----TTC-TG-G---A-TCTGA-----A-ATTATAA-A------------A----------G-TCAAAC
i Dipodomys_stephensi.DipSte_scaffold_44365             I 5 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                35139 22 -     73477 --------------------------------TCCCA-----A-ATTATAG-A------------A----------G-CAAAAG
i Dolichotis_patagonum.DolPat_scaffold_14102            I 9 C 0
s Eidolon_helvum.KE772537.1                                 11160 37 +     24177 TACAG-TTA-A-AT-----ATT-T-GG---C-TCCTA-----A-GT---AA-A------------A----------T-CCAAAG
i Eidolon_helvum.KE772537.1                             I 5 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1490459 40 +   1727528 CACAG-TTA-A-AT-----ATCTG--G---C-TCCCA-----A-AATACAA-A------------A----------G-GCAAAC
i Elaphurus_davidianus.JRFZ01086400.1                   I 5 C 0
s Ellobius_lutescens.LOEQ01003611.1                        238794 43 -    369425 GTCAG-GGA-A-AC-----TTC-TG-GCAGC-ACATA-----A-ATTATAA-A------------A----------G-TCacag
i Ellobius_lutescens.LOEQ01003611.1                     I 254 C 0
s Ellobius_talpinus.LOJH01090055.1                           5907 43 -      7838 GTCAG-CGA-A-AC-----TTC-TG-GCAGC-ACATA-----A-ATTATAA-A------------A----------G-TCACAG
i Ellobius_talpinus.LOJH01090055.1                      I 257 C 0
s Enhydra_lutris.KZ291749.1                              85870339 40 +  99434291 TGCAA-TTA-A-AC-----ACCTG--A---C-TCTCA-----A-ATTATGA-A------------A----------G-CCAAAG
i Enhydra_lutris.KZ291749.1                             I 5 C 0
s Eptesicus_fuscus.JH977687.1                             4703182 33 +   6522550 --------A-A-AT-----ATC-T-GG---C-TCCCA-----A-ATTATAA-A------------A----------G-CCAAAA
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5851912 40 -   7175178 TGCAG-AGA-A-AT-----ATC-T-GG---C-TCCCA-----A-Attataa-------a------a----------g-ccaaag
i Equus_asinus.JREZ01000062.1                           I 5 C 0
s Equus_caballus.CM000402.2                              13350415 40 +  41866177 TGCAG-AGA-A-AT-----ATC-T-GG---C-TCCCA-----A-Attataa-------a------a----------g-ccaaag
i Equus_caballus.CM000402.2                             I 5 C 0
s Equus_przewalskii.ATBW01073585.1                          11905 40 +     92910 TGCAG-AGA-A-AT-----ATC-T-GG---C-TCCCA-----A-Attataa-------a------a----------g-ccaaag
i Equus_przewalskii.ATBW01073585.1                      I 5 C 0
s Erinaceus_europaeus.JH835290.1                         11531457 44 +  16010500 TACAG-TTT-A-GT-----ATCTA--G---A-TAGCACCTT-A-ATTATGA-A------------A----------G-CCAAAT
i Erinaceus_europaeus.JH835290.1                        I 8 C 0
s Erythrocebus_patas.Contig8                             48770300 40 -  48907691 TGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCAAG
i Erythrocebus_patas.Contig8                            I 5 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          314007 40 +    330699 TGCAG-TTA-A-AT-----ATCTG--G---C-TCCCA-----A-AATATGA-A------------A----------G-CCAAAC
i Eschrichtius_robustus.EscRob_flattened_line_685       I 5 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             60461 40 +     89355 TGCAG-TTA-A-AT-----ATCCG--G---C-TCCCA-----A-AATATGA-A------------A----------G-CCAAAC
i Eubalaena_japonica.EubJap_flattened_line_7756         I 5 C 0
s Eulemur_albifrons.k141_715837                              4071 37 +     13586 TGTAG-TTA-A-AC-----ATC-TG-T---C-TCCCA-----A-ATT---G--------------A----------AGCCACAG
i Eulemur_albifrons.k141_715837                         I 2 C 0
s Eulemur_collaris.k141_311830                               4008 37 -      6809 TGTAG-TTA-A-AC-----ATC-TG-T---C-TCCCA-----A-ATT---G--------------A----------AGCCACAG
i Eulemur_collaris.k141_311830                          I 2 C 0
s Eulemur_coronatus.k141_3240342                            10481 37 +     36558 TGTAG-TTA-A-AC-----ATC-TG-T---C-TCCCA-----A-ATT---G--------------A----------AGCCACAG
i Eulemur_coronatus.k141_3240342                        I 2 C 0
s Eulemur_flavifrons.k141_903901                             6800 37 +     60246 TGTAG-TTA-A-AC-----ATC-TG-T---C-TCCCA-----A-ATT---G--------------A----------AGCCACAG
i Eulemur_flavifrons.k141_903901                        I 2 C 0
s Eulemur_fulvus.k141_653297                                10279 37 +    109717 TGTAG-TTA-A-AC-----ATC-TG-T---C-TCCCA-----A-ATT---G--------------A----------AGCCACAG
i Eulemur_fulvus.k141_653297                            I 2 C 0
s Eulemur_macaco.k141_1341545                               14662 37 +     16540 TGTAG-TTA-A-AC-----ATC-TG-T---C-TCCCA-----A-ATT---G--------------A----------AGCCACAG
i Eulemur_macaco.k141_1341545                           I 2 C 0
s Eulemur_mongoz.k141_825972                                14935 37 +     27497 TGTAG-TTA-A-TC-----ATC-TG-T---C-TCCCA-----A-GTT---G--------------A----------AGCCACAG
i Eulemur_mongoz.k141_825972                            I 2 C 0
s Eulemur_rubriventer.k141_411740                           17392 37 +     26808 TGTAG-TTA-A-AC-----ATC-TG-T---C-TCCCA-----A-ATT---G--------------A----------AGCCACAG
i Eulemur_rubriventer.k141_411740                       I 2 C 0
s Eulemur_rufus.k141_1620292                                32127 37 +     46535 TGTAG-TTA-A-AC-----ATC-TG-T---C-TCCCA-----A-ATT---G--------------A----------AGCCACAG
i Eulemur_rufus.k141_1620292                            I 2 C 0
s Eulemur_sanfordi.k141_186399                              14849 37 -     29447 TGTAG-TTA-A-AC-----ATC-TG-T---C-TCCCA-----A-ATT---G--------------A----------AGCCACAG
i Eulemur_sanfordi.k141_186399                          I 2 C 0
s Felis_catus.CM001386.2                                129891312 40 - 159252932 tGCAG-TTA-T-AT-----ACCTG--C---C-Tccca-----a-attatga-------a------a----------a-acaaag
i Felis_catus.CM001386.2                                I 5 C 0
s Felis_catus_fca126.CM031420.1                         129278384 40 - 158578461 tGCAG-TTA-T-AT-----ACCTG--C---C-Tccca-----a-attatga-------a------a----------a-acaaag
i Felis_catus_fca126.CM031420.1                         I 5 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 19519 40 +     52776 TGCAG-TTA-T-AT-----ACCTG--C---C-TCCCA-----A-ATTATGA-A------------A----------A-ACAAAG
i Felis_nigripes.FelNig_flattened_line_8080             I 5 C 0
s Fukomys_damarensis.KN123630.1                          13891745 32 -  19261668 --------------------------------TCCAA-----A-ATTAtaa-----------t--aaactgaaagtg-taaaag
i Fukomys_damarensis.KN123630.1                         I 9 C 0
s Galago_moholi.ctg555                                     209980 36 -    847004 TGCAG--AA-A-AC-----ACC-TC-G---C-TCCTT-----A-TTT---A--------------A----------AGCCAAGT
i Galago_moholi.ctg555                                  I 2 C 0
s Galago_senegalensis.k141_964197                           12359 36 -     43889 TGCAG--AA-A-AC-----ACC-TC-G---C-TCCTT-----A-TTT---A--------------A----------AGCCAAGT
i Galago_senegalensis.k141_964197                       I 2 C 0
s Galagoides_demidoff.k141_1769638                           9427 36 +     27357 TGCAG--AA-A-AC-----ACC-TC-A---C-TCCTT-----A-TTT---A--------------A----------AGCCAGAT
i Galagoides_demidoff.k141_1769638                      I 2 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               155296 39 +    324696 TGCAG-TTA-A-AC-----ATC-TG-G---C-TTCCA-----A-ACTATAA--------------A----------C-CCAAAG
i Galeopterus_variegatus.GalVar_scaffold_354            I 5 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    180259 40 -    189561 AGCAG-TTA-A-AT-----ATCTG--G---C-TCCCA-----A-AATATGA-A------------A----------G-GCAAAT
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 5 C 0
s Glis_glis.GliGli_scaffold_79770                           12143 40 -     18683 TGCAT-TTA-A-AC-----TTC-TG-G---C-TCCCA-----A-ATTATAA-A------------A----------G-CCAAAG
i Glis_glis.GliGli_scaffold_79770                       I 5 C 0
s Gorilla_beringei.k141_111300                               4365 40 -     14630 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCAAG
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119651464 40 - 195582420 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCAAG
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   76658 22 +    118900 --------------------------------TCTCA-----A-ATTATAA-A------------A----------G-CCAAAG
i Graphiurus_murinus.GraMur_scaffold_4493               I 19 C 0
s Hapalemur_alaotrensis.k141_1280836                          872 37 +     10286 TGTAG-TTA-A-AC-----ATC-TG-G---C-TCCCA-----A-ATT---G--------------A----------AGCCACAG
i Hapalemur_alaotrensis.k141_1280836                    I 2 C 0
s Hapalemur_gilberti.k141_1254239                            9048 37 +      9690 TGTAG-TTA-A-AC-----ATC-TG-G---C-TCCCA-----A-ATT---G--------------A----------AGCCACAG
i Hapalemur_gilberti.k141_1254239                       I 2 C 0
s Hapalemur_griseus.k141_1387522                             4677 37 +     56096 TGTAG-TTA-A-AC-----ATC-TG-G---C-TCCCA-----A-ATT---G--------------A----------AGCCACAG
i Hapalemur_griseus.k141_1387522                        I 2 C 0
s Hapalemur_meridionalis.k141_186231                        27927 37 -     42470 TGTAG-TTA-A-AC-----ATC-TG-G---C-TCCCA-----A-ATT---G--------------A----------AGCCACAG
i Hapalemur_meridionalis.k141_186231                    I 2 C 0
s Hapalemur_occidentalis.k141_797938                        44551 37 -     54384 TGTAG-TTA-A-AC-----ATC-TG-G---C-TCCCA-----A-ATT---G--------------A----------AGCCACAG
i Hapalemur_occidentalis.k141_797938                    I 2 C 0
s Helogale_parvula.HelPar_flattened_line_22962              15558 40 +     53719 TGCTG-TTA-T-AT-----ACCTG--T---T-TCGCA-----A-ATTATGA-A------------A----------T-CCAAAG
i Helogale_parvula.HelPar_flattened_line_22962          I 5 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                26457 40 -     91191 CACAG-TTA-A-AT-----ATCTG--G---C-TCCCA-----A-AATACGA-A------------A----------G-GCAAAC
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 5 C 0
s Heterocephalus_glaber.JH602058.1                        2550124 22 +  31725842 --------------------------------GCcga-----a-attataa-------a------a----------g-caaaag
i Heterocephalus_glaber.JH602058.1                      I 9 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               56563 22 +     73687 TATGG-T-A-A-AC-----CTC-CC-A---T-TTCCA-----------------------------------------------
i Heterohyrax_brucei.HetBruBak_scaffold_25354           I 5 I 11
s Hippopotamus_amphibius.HipAmp_scaffold_1308              146082 40 +    277961 TGCCG-TTA-A-AT-----ATGTA--G---C-TCCCA-----A-AATATGA-A------------A----------G-CCAAAC
i Hippopotamus_amphibius.HipAmp_scaffold_1308           I 5 C 0
s Hipposideros_armiger.JXIK01001085.1                      277371 40 -    477199 TGCAG-TTA-A-AT-----ATC-T-GG---C-TCTCA-----A-ATTATAA-A------------A----------G-TCAAAG
i Hipposideros_armiger.JXIK01001085.1                   I 5 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              6530 40 -      9143 TGCAG-GTA-A-AT-----ATC-T-GG---C-TCTCA-----A-ATTATAA-A------------A----------G-TCAAAG
i Hipposideros_galeritus.HipGal_scaffold_104691         I 5 C 0
s Hoolock_leuconedys.ctg649                                   102794 40 +    115816 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCTAAG
i Hoolock_leuconedys.ctg649                                I 82 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 14677 40 -     67322 TGCAG-TTA-C-AT-----ACCTG--T---C-TCCCA-----G-ATTATTA-A------------A----------A-TCAAAG
i Hyaena_hyaena.HyaHya_flattened_line_20729             I 5 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           18018 22 -    119109 --------------------------------TCCCA-----A-ATTATAA-A------------A----------T-CAAAAG
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       I 9 C 0
s Hylobates_abbotti.k141_493872                              4197 40 +      5897 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCTAAG
i Hylobates_abbotti.k141_493872                         I 5 C 0
s Hylobates_agilis.k141_624065                               1061 40 +      2112 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCTAAG
i Hylobates_agilis.k141_624065                          I 5 C 0
s Hylobates_klossii.k141_466549                             10637 40 +     11537 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCTAAG
i Hylobates_klossii.k141_466549                         I 5 C 0
s Hylobates_pileatus_b.ContigUN                                 14623742 40 -  25970782 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCTAAG
i Hylobates_pileatus_b.ContigUN                                I 5 C 0
s Hylobates_muelleri.k141_1389047                             998 40 -      2977 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCTAAG
i Hylobates_muelleri.k141_1389047                       I 5 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     5194 22 +     22540 --------------------------------TCCTA-----A-ATTATAA-A------------A----------G-CAAAAG
i Hystrix_cristata.HysCri_scaffold_50788                I 9 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7124902 41 +  13083262 TGTAG-TTA-AAAA-----TTC-TG-T---C-TCCCA-----A-GTCAGAA-A------------A----------T-ACAAGA
i Ictidomys_tridecemlineatus.JH393315.1                 I 5 C 0
s Indri_indri.k141_4418183                                    491 37 -      1457 TGTAG-TTA-A-AC-----ATC-TG-G---C-TCCCA-----A-ATT---G--------------A----------AGCCAAAG
i Indri_indri.k141_4418183                              I 2 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               8001 40 +     17520 TGCAG-TTA-A-AT-----ATCTG--G---C-TCCCA-----A-AATATGA-A------------A----------G-CCAAAC
i Inia_geoffrensis.IniGeo_flattened_line_66725          I 5 C 0
s Jaculus_jaculus.JH725517.1                              8564732 40 +  11848649 TACAG-TGA-A-AC-----TTA-TG-G---C-CCACA-----A-ATTATAA---T----------A----------T-CCAAAG
i Jaculus_jaculus.JH725517.1                            I 5 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               22621 40 +     37189 TGCAG-TTA-A-AT-----ATATG--G---C-TCCCA-----A-AATATGA-A------------A----------G-CCAAAC
i Kogia_breviceps.KogBre_flattened_line_35920           I 5 C 0
s Lagothrix_lagothricha.k141_12968                          49219 40 -    147782 AGCAG-TGA-A-AC-----ACC-TG-T---C-TCCCA-----A-GTTATAA--------------A----------AGCCAAAG
i Lagothrix_lagothricha.k141_12968                      I 5 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   113029 33 -    115756 --------A-A-AT-----ATC-T-GA---C-TCCCA-----A-GTTATAA-A------------A----------G-CCAAAA
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258406232 37 - 285822530 TGTAG-TTA-A-AC-----ATC-TG-G---C-TCCCC-----A-ATT---G--------------A----------AGCCACAG
i Lemur_catta.scaffold_1                                I 2 C 0
s Lepilemur_ankaranensis.k141_884009                        22984 37 +     39228 TGTAG-TTA-A-AC-----ATC-CG-G---C-TCCCA-----A-ACT---G--------------A----------AGCCAAAG
i Lepilemur_ankaranensis.k141_884009                    I 2 C 0
s Lepilemur_dorsalis.k141_134267                            52359 37 +     63517 TGTAG-TTA-A-AC-----ATC-CG-G---C-TCCCA-----A-ACT---G--------------A----------AGCCAAAG
i Lepilemur_dorsalis.k141_134267                        I 2 C 0
s Lepilemur_ruficaudatus.k141_617879                        77609 37 +    116806 TGTAG-TTA-A-AC-----ATC-CG-G---C-TCCCA-----A-ATT---G--------------A----------AGCCAAAG
i Lepilemur_ruficaudatus.k141_617879                    I 2 C 0
s Lepilemur_septentrionalis.k141_578524                     30623 37 -     33031 TGTAG-TTA-A-AC-----ATC-CG-G---C-TCCCA-----A-ACT---G--------------A----------AGCCAAAG
i Lepilemur_septentrionalis.k141_578524                 I 2 C 0
s Leptonychotes_weddellii.KB714749.1                      3084353 40 -   3498232 TGCAG-TTA-A-AT-----ACCTG--G---C-TCCCA-----A-ATTATGA-A------------A----------G-CCAAAG
i Leptonychotes_weddellii.KB714749.1                    I 5 C 0
s Lepus_americanus.LepAme_scaffold_62849                    11986 39 +     22452 TCCA--TTA-A-AC-----ATT-GA-G---C-TACCA-----A-ATTATGA-A------------A----------G-CCAAAG
i Lepus_americanus.LepAme_scaffold_62849                I 5 C 0
s Lipotes_vexillifer.KE558548.1                            134954 40 +   3060487 TGCAG-TTA-A-AT-----ATCTG--G---C-TCCCA-----A-AATATGA-A------------A----------G-CCAAAC
i Lipotes_vexillifer.KE558548.1                         I 5 C 0
s Lophocebus_aterrimus.ctg55                             19247368 40 +  19376315 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCAAG
i Lophocebus_aterrimus.ctg55                            I 5 C 0
s Loris_lydekkerianus.k141_550999                            9744 36 +     84689 TGCAG--AA-A-AC-----ATC-TG-G---C-TCCTT-----A-TTT---A--------------A----------AGCCAGAT
i Loris_lydekkerianus.k141_550999                       I 2 C 0
s Loris_tardigradus.ctg97                                 3777493 36 +   6799190 TGCAG--AA-A-AC-----ATC-TG-G---C-TCCTT-----A-TTT---A--------------A----------AGCCAGAT
i Loris_tardigradus.ctg97                               I 2 C 0
s Loxodonta_africana.GL010040.1                          20591090 30 -  62548349 TGCAG-T-A-A-AC-----ATC-CT-G---T-TCCCA-----G-GCTGTAA---------------------------------
i Loxodonta_africana.GL010040.1                         I 5 I 4
s Lycaon_pictus.CM007556.1                               11086161 40 +  39895028 TGCAG-CTT-A-AT-----ATCTG--G---T-TCCCA-----A-ATTATGA-A------------A----------G-TGAAAG
i Lycaon_pictus.CM007556.1                              I 5 C 0
s Macaca_arctoides.k141_2201161                             19108 40 +     74745 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCAAG
i Macaca_arctoides.k141_2201161                         I 5 C 0
s Macaca_assamensis.Contig65                             12705564 40 +  12821369 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCAAG
i Macaca_assamensis.Contig65                            I 5 C 0
s Macaca_cyclopis.k119_893486                                1209 40 -      3136 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCACA-----A-ATTATAA--------------A----------AGCCCAAG
i Macaca_cyclopis.k119_893486                           I 5 C 0
s Macaca_fascicularis.k141_155037                           46026 40 +     63263 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCAAG
i Macaca_fascicularis.k141_155037                       I 5 C 0
s Macaca_fuscata.k119_599327                                  729 40 -      2568 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCAAG
i Macaca_fuscata.k119_599327                            I 5 C 0
s Macaca_leonina.k141_467472                                 1315 40 -      7381 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCAAG
i Macaca_leonina.k141_467472                            I 5 C 0
s Macaca_maura.k141_251854                                  44533 40 -     79256 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCAAG
i Macaca_maura.k141_251854                              I 5 C 0
s Macaca_mulatta.NC_041755.1                            196034641 40 + 196197964 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCAAG
i Macaca_mulatta.NC_041755.1                            I 5 C 0
s Macaca_nemestrina.KQ004885.1                           11444808 40 +  11645122 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCAAG
i Macaca_nemestrina.KQ004885.1                          I 5 C 0
s Macaca_nigra.k141_282495                                   3480 40 -     46448 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCAAG
i Macaca_nigra.k141_282495                              I 5 C 0
s Macaca_radiata.k141_3680256                                1152 40 -     13212 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCAAG
i Macaca_radiata.k141_3680256                           I 5 C 0
s Macaca_siberu.k141_741907                                 14832 40 -     55006 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCAAG
i Macaca_siberu.k141_741907                             I 5 C 0
s Macaca_silenus.Contig12                                43839950 40 +  43892939 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCAAG
i Macaca_silenus.Contig12                               I 5 C 0
s Macaca_thibetana.k99_662710                               16119 40 -     24607 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCAAG
i Macaca_thibetana.k99_662710                           I 5 C 0
s Macaca_tonkeana.k141_2870633                               3485 40 -     27140 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCAAG
i Macaca_tonkeana.k141_2870633                          I 5 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                700574 37 +    802869 TACAG-TTA-A-AT-----ATT-T-GG---C-TCCTA-----A-AT---AA-A------------A----------G-CCAGAG
i Macroglossus_sobrinus.MacSob_scaffold_879             I 5 C 0
s Mandrillus_leucophaeus.scaffold125                     43436527 40 -  43563597 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCAAG
i Mandrillus_leucophaeus.scaffold125                    I 5 C 0
s Mandrillus_sphinx.Contig144                             4449353 40 -   4543643 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCAAG
i Mandrillus_sphinx.Contig144                           I 5 C 0
s Marmota_marmota.CZRN01000005.1                         36872741 41 +  64221397 TGTAG-TTA-AAAA-----TTC-TG-T---C-TCCCA-----A-GTCAGAA-A------------A----------G-ACAAGA
i Marmota_marmota.CZRN01000005.1                        I 5 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       63371 40 -    234502 TGCTA-TTA-A-AT-----ATC-T-GG---C-TCCCA-----A-ACTATAA-A------------A----------G-CCAAGT
i Megaderma_lyra.MegLyr_scaffold_3562                   I 5 C 0
s Mellivora_capensis.MelCap_flattened_line_146202             946 40 -      1999 TGCAG-TTA-A-AT-----ACCTG--A---C-TCTCA-----A-ATTATGA-A------------A----------G-CCAAAG
i Mellivora_capensis.MelCap_flattened_line_146202       I 5 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               11743 42 +     15977 TTCAG-GGA-A-AC-----T-C-TG-GCAGC-TCACA-----A-ACTATAA-A------------A----------G-TCACAG
i Meriones_unguiculatus.MerUng_scaffold_52233           I 287 C 0
s Mesocricetus_auratus.KB708139.1                         1045948 41 -  26018355 TTCAG-TGA-A-AC-----TTC-TG-GCAGC-TCTCA-----A-GTTATA---------------A----------G-TCACAG
i Mesocricetus_auratus.KB708139.1                       I 228 C 0
s Microcebus_murinus.CM007691.1                          16509237 37 +  47401472 TATAG-TTA-A-AC-----ATC-TG-G---C-TCCCA-----A-ATT---G--------------A----------agccaaag
i Microcebus_murinus.CM007691.1                         I 2 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               21665 39 -     32043 GGCT--TTA-G-AA-----ACC-T-GG---C-TCCCA-----A-ATTTAAA-A------------A----------G-CCAAAA
i Micronycteris_hirsuta.MicHir_scaffold_37978           I 5 C 0
s Microtus_ochrogaster.CM001673.1                        22819087 43 -  98408828 GTCAG-CTA-A-AC-----TTC-AG-GCAGC-ACACA-----A-ATGATAA-A------------A----------G-TCACAG
i Microtus_ochrogaster.CM001673.1                       I 257 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8208659 40 +  10048721 GGCAG-TTA-A-AT-----ATC-T-GG---C-TCCCA-----A-ATTATAAG-------------A----------G-CCAAAA
i Miniopterus_natalensis.LDJU01000022.1                 I 5 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            33316 40 +     45743 GGCAG-TTA-A-AT-----ATC-T-GG---C-TCCCA-----A-GTTATAAG-------------A----------G-CCAAAA
i Miniopterus_schreibersii.MinSch_scaffold_24116        I 5 C 0
s Miopithecus_ogouensis.k141_2935907                         1080 40 +     29742 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCAAG
i Miopithecus_ogouensis.k141_2935907                    I 5 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         9861 40 -    104932 TGCAG-TTA-A-AT-----ACCTG--G---C-TCCCA-----A-ATTATGA-A------------A----------G-CCAAAG
i Mirounga_angustirostris.MirAng_flattened_line_8852    I 5 C 0
s Mirza_zaza.k141_226143                                     4627 37 +      8497 TGTAG-TTA-A-AC-----ATC-TG-G---C-TCTCA-----A-ATT---G--------------A----------AGCCAAAG
i Mirza_zaza.k141_226143                                I 2 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 145389 40 +    154973 TGCAG-CTA-A-AT-----ATCTG--G---C-CCCCC-----A-AATATGA-A------------A----------G-CCAAAC
i Monodon_monoceros.MonMon_M_scaffold_5598              I 5 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                160175 40 +    265003 CACAG-TAA-A-AT-----ACC-T-GA---C-TCCCA-----A-ATTTAAA-A------------A----------G-CCAAAA
i Mormoops_blainvillei.MorMeg_scaffold_2952             I 5 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 3560 40 -      4346 CGCAG-TTA-A-AT-----ATCTG--G---C-TCCCA-----A-AATATGG-A------------A----------A-GCAAAC
i Moschus_moschiferus.MosMos_scaffold_146101            I 5 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  143249 40 -    168139 TGCAG-TTA-T-AT-----ACCTG--T---T-TCCCA-----A-GTTATGA-A------------A----------T-CCAAAG
i Mungos_mungo.MunMun_flattened_line_8729               I 5 C 0
s Murina_feae.MurFea_scaffold_2254                          18542 33 -    100666 --------A-A-AT-----ATC-T-GG---C-TCCCA-----A-ATTATAG-A------------A----------G-CCAAAA
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70765593 42 +  92629107 TTCAC-TGA-A-AT-----G-C-TG-GCAGC-TCACA-----A-ACTATAA-A------------A----------G-TCACTG
i Mus_caroli.LT608236.1                                 I 266 C 0
s Mus_musculus.chr16                                     75488631 42 +  98207768 TTCAG-TGA-A-AT-----G-C-TG-GCAGC-TCACG-----A-ATTATAA-A------------A----------G-TCACTG
i Mus_musculus.chr16                                    I 267 C 0
s Mus_pahari.LT608305.1                                  67554866 42 +  89017189 TTCAA-TGA-A-AT-----G-C-TG-GCAGC-TCACA-----A-ATTATAA-A------------A----------G-TCACGG
i Mus_pahari.LT608305.1                                 I 266 C 0
s Mus_spretus.CM004110.1                                 74329810 42 +  97876770 TTCAG-TGA-A-AT-----G-C-TG-GCAGC-TCACG-----A-ATTATAA-A------------A----------G-TCACTG
i Mus_spretus.CM004110.1                                I 267 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             10625 40 +     98495 TGCAT-TTA-A-AC-----TTC-TG-G---C-TCCCT-----A-ATTATAA-A------------A----------T-CCTAAG
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 5 C 0
s Mustela_putorius.JH417978.1                             4422518 40 -  28371801 TGCAA-TTA-A-AC-----ACCTG--A---C-TCTCA-----A-ATTATGA-A------------A----------G-CCAAAG
i Mustela_putorius.JH417978.1                           I 5 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     89075 22 -    117718 --------------------------------CCCCA-----A-ATAATAA-A------------A----------G-CAAAAG
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 8 C 0
s Myotis_brandtii.KE161952.1                               966847 33 +   8389877 --------A-A-AT-----ATC-T-GG---C-TCCCA-----A-ATTATAA-A------------A----------G-CCAAAA
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5018523 33 +   6462685 --------A-A-AT-----ATC-T-GG---C-TCCCA-----A-ATTATAA-A------------A----------G-CCAAAA
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3464427 33 -   3747815 --------A-A-AT-----ATC-T-GG---C-TCCCA-----A-ATTATAA-A------------A----------G-CCAAAA
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         9642 33 +     66751 --------A-A-AT-----ATC-T-GG---C-TCCCA-----A-ATTATAA-A------------A----------G-CCAAAA
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             4027 39 -      8794 TGTTG-ATA-A--T-----ATT-TG-G---C-TCCCA-----T-ATTATAA-A------------A----------T-CCAAAG
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        I 5 C 0
s Nannospalax_galili.KL201303.1                            117427 38 +    362372 --CAG-TGA-A-AC-----TTC-TG-G---C-TCACC-----A-ATTATAA-A------------A----------A-CTACAG
i Nannospalax_galili.KL201303.1                         I 240 C 0
s Nasalis_larvatus.k141_153429                               7582 40 +     48152 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCGAG
i Nasalis_larvatus.k141_153429                          I 5 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4483253 39 -  14209539 TGCAG-T-A-A-AT-----ACCTG--G---C-TCCCA-----A-ATTATGA-A------------A----------G-CCAAAG
i Neomonachus_schauinslandi.NINY01007774.1              I 5 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3950003 40 -   4490290 TGCAG-CTA-A-AT-----ATCTG--G---C-CCCCC-----A-AATATGA-A------------A----------G-CCAAAC
i Neophocaena_asiaeorientalis.KZ688543.1                I 5 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  48279 40 +     94413 GGCAA-TTG-A-AT-----ACC-C-AT---C-TCTCA-----A-ATTTAAA-A------------A----------G-CCAGAA
i Noctilio_leporinus.NocLep_scaffold_12062              I 5 C 0
s Nomascus_annamensis.k141_1439838                           1939 40 +      3718 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCTAAG
i Nomascus_annamensis.k141_1439838                      I 5 I 20
s Nomascus_concolor.k141_226614                               299 40 -      5092 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCTAAG
i Nomascus_concolor.k141_226614                         I 5 C 0
s Nomascus_gabriellae.k141_642452                            1082 40 +      2851 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCTAAG
i Nomascus_gabriellae.k141_642452                       I 5 C 0
s Nomascus_siki_a.k141_595747                                  1720 40 +      4512 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCTAAG
i Nomascus_siki_a.k141_595747                             I 5 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                29190 40 +   3668941 TGCAG-TTT-A-AT-----ATCTG--G---C-TCTCA-----A-ATTATGA-A------------A----------G-TGAAAG
i Nyctereutes_procyonoides.CAJHUB010000786.1            I 5 C 0
s Nycticebus_bengalensis.LG16                            65566178 36 -  95554990 TGCAG--AA-A-AC-----ATC-TG-G---C-TCCTT-----A-TTT---A--------------A----------AGCCAGAT
i Nycticebus_bengalensis.LG16                           I 2 C 0
s Nycticebus_coucang.k141_2051882                            2907 36 +      6470 TGCAG--AA-A-AC-----ATC-TG-G---C-TCCTT-----A-TTT---A--------------A----------AGCCAGAT
i Nycticebus_coucang.k141_2051882                       I 2 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65668516 36 +  89412551 TGCAG--AA-A-AC-----ATC-TG-G---C-TCCTT-----A-TTT---A--------------A----------AGCCAGAT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     I 2 C 0
s Ochotona_princeps.JH802095.1                            4995071 39 -  23139505 TGCA--TTA-A-AC-----ATT-GA-G---C-TACTG-----A-ATTATTGG-------------A----------G-CCCAAG
i Ochotona_princeps.JH802095.1                          I 5 C 0
s Octodon_degus.JH651621.1                                3684617 22 +  10294119 --------------------------------Cccca-----a-ataataa-------a------a----------g-caaaag
i Octodon_degus.JH651621.1                              I 8 C 0
s Odobenus_rosmarus.KB229369.1                             677898 40 -   3126709 TGCAG-TTA-A-AT-----ACCTG--G---C-TCCCA-----A-ATTATGA-A------------A----------G-CCAAAG
i Odobenus_rosmarus.KB229369.1                          I 5 C 0
s Odocoileus_virginianus.KZ101650.1                       1078689 41 +   1425656 CACAG-TTA-A-AT-----ATCTG--G---C-TCCCA-----AAAATACAA-A------------A----------G-GCAAAC
i Odocoileus_virginianus.KZ101650.1                     I 5 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         35985 40 +     78940 CGCAG-TTA-A-AT-----ATCTG--G---C-TCCCA-----A-AATATGA-A------------A----------G-GCAAAC
i Okapia_johnstoni.LVCL01S0017931.1                     I 5 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  124344 43 +    145789 GCCAT-AGA-A-AC-----TTC-TG-GCCTC-ACACA-----A-ATTATAA-A------------A----------G-TCACAG
i Ondatra_zibethicus.OndZib_scaffold_6821               I 258 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  36145 43 +     62360 TTCAG-CGA-A-AC-----TGC-TG-GCAGC-TCACA-----A-ATTATAA-A------------A----------G-TCACAG
i Onychomys_torridus.OnyTor_scaffold_12578              I 288 C 0
s Orcinus_orca.KB316965.1                                 7223686 40 -   7562323 TGCAG-CTA-A-AT-----ATGTG--G---C-CCCCC-----A-AATATGA-A------------A----------G-CCAAAC
i Orcinus_orca.KB316965.1                               I 5 C 0
s Oryctolagus_cuniculus.CM000803.1                      141875015 29 + 163896628 -------------------ATT-GA-A---C-TACCA-----A-ATTATGA-A------------A----------G-CCAAAG
i Oryctolagus_cuniculus.CM000803.1                      I 10 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      306478 40 -    505867 AGCAG-TTT-A-AT-----ATCTG--G---C-TCCCA-----A-ATTATGA-A------------A----------G-TGAAAG
i Otocyon_megalotis.JAEUCK010005121.1                   I 5 C 0
s Otolemur_crassicaudatus.k141_321880                       38076 36 +     38679 TGTAG--AA-A-AC-----ACC-TC-G---C-TCTTT-----A-TTT---A--------------A----------AGCCAAAT
i Otolemur_crassicaudatus.k141_321880                   I 2 C 0
s Otolemur_garnettii.GL873528.1                          18007504 36 -  38779656 TGTAG--AA-A-AC-----ACC-TC-A---C-TTTTT-----A-TTT---A--------------A----------AGCCAAAT
i Otolemur_garnettii.GL873528.1                         I 2 C 0
s Ovis_aries.CM001582.2                                 134076251 40 - 275406953 CACAG-TTA-A-AT-----ATCTG--G---C-TCCCA-----A-AATACGA-A------------A----------G-GCAAAC
i Ovis_aries.CM001582.2                                 I 5 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      77465 40 +    140051 CACAG-TTA-A-AT-----ATCTG--G---C-TCCCA-----A-AATACGA-A------------A----------G-GCAAAC
i Ovis_canadensis.OviCan_scaffold_6251                  I 5 C 0
s Pan_paniscus.AJFE02000033.1                                  55 40 -      1012 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCTAAG
i Pan_paniscus.AJFE02000033.1                           C 0 C 0
s Pan_troglodytes.NBAG03000771.1                           179027 40 +    210065 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCTAAG
i Pan_troglodytes.NBAG03000771.1                        I 123 I 61
s Panthera_onca.PanOnc_flattened_line_1615                  32713 40 +    295523 TGCAG-TTA-T-AT-----ACCTG--C---C-TCCCA-----A-ATTATGA-A------------A----------A-ACAAAG
i Panthera_onca.PanOnc_flattened_line_1615              I 5 C 0
s Panthera_pardus.KV860323.1                              3636447 40 +  18214204 tGCAG-TTA-T-AT-----ACCTG--C---C-TCcca-----a-attatga-------a------a----------a-acaaag
i Panthera_pardus.KV860323.1                            I 5 C 0
s Panthera_tigris.KE721879.1                              5026094 40 -   6340057 tGCAG-TTA-T-AT-----ACCTG--C---C-Ttcca-----a-attatga-------a------a----------a-acaaag
i Panthera_tigris.KE721879.1                            I 5 C 0
s Pantholops_hodgsonii.KE114631.1                         1065112 40 -   1292953 CACAG-TTA-A-AT-----ATCTG--G---C-TCCCA-----A-AATACGA-A------------A----------G-GCAAAC
i Pantholops_hodgsonii.KE114631.1                       I 5 C 0
s Papio_anubis.CM001492.2                               188155318 40 - 188283584 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCAAG
i Papio_anubis.CM001492.2                               I 5 C 0
s Papio_cynocephalus.k141_883042                             3635 40 +      5367 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCAAG
i Papio_cynocephalus.k141_883042                        I 5 C 0
s Papio_hamadryas.Contig15                               47512706 40 +  47705337 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCAAG
i Papio_hamadryas.Contig15                              I 5 C 0
s Papio_kindae.k141_5458022                                 66684 40 -    104429 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCAAG
i Papio_kindae.k141_5458022                             I 5 C 0
s Papio_papio.k141_979496                                    5216 40 +     14967 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCAAG
i Papio_papio.k141_979496                               I 5 C 0
s Papio_ursinus.k141_1345919                                 1077 40 -      7628 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCAAG
i Papio_ursinus.k141_1345919                            I 5 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    114030 40 -    135482 TCCAG-TTA-T-AT-----ACCTG--G---C-TCCCA-----A-ATTATGA-A------------A----------A-CCAAAG
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 I 5 C 0
s Perodicticus_ibeanus.k141_117958                           4490 35 -     23713 TGCAG--AA-A-AC-----ATC-TG-G---C-TCCTT-----C-TTT---A--------------A----------AGTCAGA-
i Perodicticus_ibeanus.k141_117958                      I 2 I 1
s Perodicticus_potto.k141_713187                            23799 35 -     27972 TGCAG--AA-A-AC-----ATC-TG-G---C-TCCTT-----C-TTT---A--------------A----------AGTCAGA-
i Perodicticus_potto.k141_713187                        I 2 I 1
s Perognathus_longimembris.PerPac_flattened_line_22291      42650 41 -     45160 TATATGTTA-A-AC-----TTT-GG-A---G-TCTCA-----A-ATTATAA-A------------A----------G-TCAGAA
i Perognathus_longimembris.PerPac_flattened_line_22291  I 5 C 0
s Peromyscus_maniculatus.KI615518.1                       4949377 43 -   8017169 TTCAG-TGA-A-AC-----TGC-TG-GCAGC-TCACA-----A-ATTATAA-A------------A----------G-TCACAG
i Peromyscus_maniculatus.KI615518.1                     I 252 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    11553 22 -     36578 --------------------------------TCTCA-----A-ATTATAA-A------------A----------G-CAAAAG
i Petromus_typicus.PetTyp_scaffold_33007                I 9 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            120303 40 -    122454 TGCAG-CTA-A-AT-----ATCTG--G---C-CCCCC-----A-AATATGA-A------------A----------G-CCAAAC
i Phocoena_phocoena.PhoPho_flattened_line_11948         I 5 C 0
s Piliocolobus_badius.k141_1987485                           1104 40 -      5908 AGCTG-TTA-A-AC-----ACC-TG-A---T-TCCCA-----A-ATTATAA--------------A----------AGCCCGAG
i Piliocolobus_badius.k141_1987485                      I 5 C 0
s Piliocolobus_gordonorum.k141_1270531                       1724 40 -     17985 AGCTG-TTA-A-AC-----ACC-TG-A---T-TCCCA-----A-ATTATAA--------------A----------AGCCCGAG
i Piliocolobus_gordonorum.k141_1270531                  I 5 C 0
s Piliocolobus_kirkii.k141_929665                            1091 40 +      7694 AGCTG-TTA-A-AC-----ACC-TG-A---T-TCCCA-----A-ATTATAA--------------A----------AGCCCGAG
i Piliocolobus_kirkii.k141_929665                       I 5 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26739569 40 +  26888534 AGCTG-TTA-A-AC-----ACC-TG-A---T-TCCCA-----A-ATTATAA--------------A----------AGCCCGAG
i Piliocolobus_tephrosceles.PDMG02000036.1              I 5 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            96469 33 +    112873 --------A-A-AT-----AGC-T-GG---C-TCCCA-----A-ATTATAA-A------------A----------G-CCAAAA
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             42701 40 -     61926 AGCAG-TGA-A-AC-----ACC-TG-T---C-TCCCA-----A-ATTATAA--------------A----------GGTCAAAG
i Pithecia_albicans.k141_991845                         I 5 C 0
s Pithecia_chrysocephala.k141_159118                        24132 40 +     78826 AGCAG-TGA-A-AC-----ACC-TG-T---C-TCCCA-----A-ATTATAA--------------A----------GGCCAAAG
i Pithecia_chrysocephala.k141_159118                    I 5 C 0
s Pithecia_hirsuta.k141_1152968                              8081 40 -     15800 AGCAG-TGA-A-AC-----ACC-TG-T---C-TCCCA-----A-ATTATAA--------------A----------GGTCAAAG
i Pithecia_hirsuta.k141_1152968                         I 5 C 0
s Pithecia_mittermeieri.k141_2119203                        11279 40 -     16101 AGCAG-TGA-A-AC-----ACC-TG-T---C-TCCCA-----A-ATTATAA--------------A----------GGTCAAAG
i Pithecia_mittermeieri.k141_2119203                    I 5 C 0
s Pithecia_pissinattii.k141_1102319                          4588 40 +      9673 AGCAG-TGA-A-AC-----ACC-TG-T---C-TCCCA-----A-ATTATAA--------------A----------GGTCAAAG
i Pithecia_pissinattii.k141_1102319                     I 5 C 0
s Pithecia_pithecia.tarseq_313                           13473584 40 -  19735023 AGCAG-TGA-A-AC-----ACC-TG-T---C-TCCCA-----A-ATTATAA--------------A----------GGTCAAAG
i Pithecia_pithecia.tarseq_313                          I 5 C 0
s Pithecia_vanzolinii.k141_831006                           12490 40 -     31692 AGCAG-TGA-A-AC-----ACC-TG-T---C-TCCCA-----A-ATTATAA--------------A----------GGTCAAAG
i Pithecia_vanzolinii.k141_831006                       I 5 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           4371 40 +     21690 TGCAG-TTA-A-AT-----ATCTG--G---C-TCCCA-----A-AATATGA-A------------A----------G-CCAAAC
i Platanista_gangetica.PlaMin_flattened_line_72990      I 5 C 0
s Plecturocebus_bernhardi.k141_959214                       21925 40 +     44506 AGCAG-TGA-A-AC-----GCC-CG-T---C-TCCCA-----A-ATTATAA--------------A----------AGCCAAAG
i Plecturocebus_bernhardi.k141_959214                   I 5 C 0
s Plecturocebus_brunneus.k141_498086                        22137 40 +     67491 AGCAG-TGA-A-AC-----GCC-CG-T---C-TCCCA-----A-ATTATAA--------------A----------AGCCAAAG
i Plecturocebus_brunneus.k141_498086                    I 5 C 0
s Plecturocebus_caligatus.k141_2539816                      12376 40 -     98129 AGCAG-TGA-A-AC-----GCC-CG-T---C-TCCCA-----A-ATTATAA--------------A----------AGCCAAAG
i Plecturocebus_caligatus.k141_2539816                  I 5 C 0
s Plecturocebus_cinerascens.k141_744510                     21976 40 +    147771 AGCAG-TGA-A-AC-----GCC-CG-T---C-TCCCA-----A-ATTATAA--------------A----------AGCCAAAG
i Plecturocebus_cinerascens.k141_744510                 I 5 C 0
s Plecturocebus_cupreus.k141_1223294                        22231 40 -     23762 AGCAG-TGA-A-AC-----GCC-CG-T---C-TCCCA-----A-ATTATAA--------------A----------AGCCAAAG
i Plecturocebus_cupreus.k141_1223294                    I 5 C 0
s Plecturocebus_dubius.k141_3565563                          2697 40 -     55515 AGCAG-TGA-A-AC-----GCC-CG-T---C-TCCCA-----A-ATTATAA--------------A----------AGCCAAAG
i Plecturocebus_dubius.k141_3565563                     I 5 C 0
s Plecturocebus_grovesi.k141_242819                         22050 40 +    152463 AGCAG-TGA-A-AC-----GCC-CG-T---C-TCCCA-----A-ATTATAA--------------A----------AGCCAAAG
i Plecturocebus_grovesi.k141_242819                     I 5 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      8810 40 +      8943 AGCAG-TGA-A-AC-----GCC-CG-T---C-TCCCA-----A-ATTATAA--------------A----------AGCCAAAG
i Plecturocebus_hoffmannsi.k141_1595076                 I 5 C 0
s Plecturocebus_miltoni.k141_841561                         11772 40 +    134592 AGCAG-TGA-A-AC-----GCC-CG-T---C-TCCCA-----A-ATTATAA--------------A----------AGCCAAAG
i Plecturocebus_miltoni.k141_841561                     I 5 C 0
s Plecturocebus_moloch.k141_890597                          22360 40 -     75465 AGCAG-TGA-A-AC-----GCC-CG-T---C-TCCCA-----A-ATTATAA--------------A----------AGCCAAAG
i Plecturocebus_moloch.k141_890597                      I 5 C 0
s Pongo_abelii.NDHI03003816.1                              186250 40 -    373494 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCAAG
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19806898 40 +  19899266 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCAAG
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               4826 40 -     15069 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCGAG
i Presbytis_comata.k141_672698                          I 5 C 0
s Presbytis_mitrata.k141_860013                              4960 40 +     14865 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCGAG
i Presbytis_mitrata.k141_860013                         I 5 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                76427 22 +     78963 TATGG-T-A-A-AC-----CTC-AC-A---T-TTCCA-----------------------------------------------
i Procavia_capensis.ProCapCap_scaffold_15315            I 5 I 11
s Prolemur_simus.MPIZ01000048.1                           6847613 37 +  12164890 TGTAG-TTA-A-AC-----ATC-TG-G---C-TCCCA-----A-ATT---G--------------A----------AGCCACAG
i Prolemur_simus.MPIZ01000048.1                         I 2 C 0
s Propithecus_coquerelli.NW_012147997.1                    666832 37 -   2312742 TGTAA-TTA-A-AC-----ATC-TG-G---C-TCCCA-----A-ATT---G--------------A----------agccaaag
i Propithecus_coquerelli.NW_012147997.1                 I 2 C 0
s Propithecus_coronatus.k141_1353159                         2659 37 +     11805 TGTAG-TTA-A-AC-----ATC-TG-G---T-TCCCA-----A-ATT---G--------------A----------AGCCAAAG
i Propithecus_coronatus.k141_1353159                    I 2 C 0
s Propithecus_diadema.k141_577245                           41995 37 +     52369 TGTAG-TTA-A-AC-----ATT-TG-G---C-TCCCA-----G-ATT---G--------------A----------AGCCAAAG
i Propithecus_diadema.k141_577245                       I 2 C 0
s Propithecus_edwardsi.k141_1317105                         34385 37 -     44753 TGTAG-TTA-A-AC-----ATT-TG-G---C-TCCCA-----A-ATT---G--------------A----------AGCCAAAG
i Propithecus_edwardsi.k141_1317105                     I 2 C 0
s Propithecus_perrieri.k141_7554                            16305 37 +     27322 TGTAG-TTA-A-AC-----ATT-TG-G---C-TCCCA-----G-ATT---G--------------A----------AGCCAAAG
i Propithecus_perrieri.k141_7554                        I 2 C 0
s Propithecus_tattersalli.k141_907138                       15941 37 -     53241 TGTAG-TTA-A-AC-----ATC-TG-G---T-TCCCA-----A-ATT---G--------------A----------AGCCAAAG
i Propithecus_tattersalli.k141_907138                   I 2 C 0
s Propithecus_verreauxi.k141_158021                         38213 37 -     48185 TGTAA-TTA-A-AC-----ATC-TG-G---C-TCCCA-----A-ATT---G--------------A----------AGCCAAAG
i Propithecus_verreauxi.k141_158021                     I 2 C 0
s Psammomys_obesus.NESX01026517.1                           33279 42 +     77221 TTCAG-GAA-A-AC-----T-C-CG-GCAGC-TCACA-----A-GCTATGA-A------------A----------G-TCGCAG
i Psammomys_obesus.NESX01026517.1                       I 285 C 0
s Pteronotus_parnellii.KE867983.1                            2843 40 -     27784 GGCAG-TTA-A-AT-----ACC-T-GG---C-TCcca-----a-atttaaa-------a------a----------g-ccaaaa
i Pteronotus_parnellii.KE867983.1                       I 5 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        244823 40 -    344369 TGCAA-TTA-A-AC-----ACCTG--A---C-TCTCA-----A-ATTATGA-A------------A----------G-ACAAAG
i Pteronura_brasiliensis.PteBra_flattened_line_1343     I 5 C 0
s Pteropus_alecto.KB031157.1                             13244961 37 -  17261082 TACGG-TTA-A-AT-----ATT-T-GG---C-Tccta-----a-at---aa-------a------a----------g-ccaaag
i Pteropus_alecto.KB031157.1                            I 5 C 0
s Pteropus_vampyrus.KN525959.1                             602911 37 -   3946241 TACGG-TTA-A-AT-----ATT-T-GG---C-Tccta-----a-at---aa-------a------a----------g-ccaaag
i Pteropus_vampyrus.KN525959.1                          I 5 C 0
s Puma_concolor.QAVW01000427.1                          131532677 40 - 161321710 tGCAG-TTA-T-AT-----ACCTG--C---C-TCCCg-----a-attatga-------a------a----------a-acaaag
i Puma_concolor.QAVW01000427.1                          I 5 C 0
s Pygathrix_cinerea.k141_374971                             28944 40 +     56732 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCGAG
i Pygathrix_cinerea.k141_374971                         I 5 C 0
s Pygathrix_nigripes_b.ctg79                                 6805435 40 +   6970761 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCGAG
i Pygathrix_nigripes_b.ctg79                               I 5 C 0
s Pygathrix_nigripes_a.k141_101123                             4829 40 +     18040 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCGAG
i Pygathrix_nigripes_a.k141_101123                        I 5 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                14766 41 +     68503 CACAG-TTA-A-AT-----ATCCG--G---C-TCCCA-----AAAATACAA-A------------A----------G-GCAAAC
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 5 C 0
s Rattus_norvegicus.chr11                                13914565 42 +  90463843 TTCAG-TGA-A-AC-----G-C-TG-GCAGC-TCACA-----A-ATTATAA-A------------A----------G-TCACAG
i Rattus_norvegicus.chr11                               I 194 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1786773 40 +   2252614 TGCAG-TTA-A-AT-----ATC-T-GG---C-TCCCA-----A-ATTATGA-A------------A----------G-CCAAAG
i Rhinolophus_sinicus.LVEH01000179.1                    I 5 C 0
s Rhinopithecus_bieti.k119_1391695                           1057 40 -      1866 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCGAG
i Rhinopithecus_bieti.k119_1391695                      I 5 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206376714 40 - 206558726 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCGAG
i Rhinopithecus_roxellana.NC_044549.1                   I 5 C 0
s Rhinopithecus_strykeri.ctg4                            44855614 40 -  45163003 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCGAG
i Rhinopithecus_strykeri.ctg4                           I 5 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                18251 37 +    109198 TACAG-TTA-A-AT-----ATT-T-GG---C-TCCTA-----A-AT---AA-A------------A----------G-CCAAAG
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            I 5 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       6568 40 +     12214 TGCAG-TTA-A-AT-----ATCTG--G---A-TCCCA-----A-AATATGA-A------------A----------G-GCAAAC
i Saiga_tatarica.SaiTat_scaffold_82192                  I 5 C 0
s Saimiri_boliviensis.NW_024100938.1                     15671788 40 -  43202129 AGCAG-TCA-A-AC-----ACC-TG-T---C-TCCCA-----A-ATTATAA--------------A----------agccaaag
i Saimiri_boliviensis.NW_024100938.1                    I 5 C 0
s Saimiri_cassiquiarensis.k141_808270                        3705 40 +     34089 AGCAG-TCA-A-AC-----ACC-TG-T---A-TCCCA-----A-ATTATAA--------------A----------AGCCAAAG
i Saimiri_cassiquiarensis.k141_808270                   I 5 C 0
s Saimiri_macrodon.k141_2087127                              3646 40 -     60842 AGCAG-TCA-A-AC-----ACC-TG-T---A-TCCCA-----A-ATTATAA--------------A----------AGCCAAAG
i Saimiri_macrodon.k141_2087127                         I 5 C 0
s Saimiri_oerstedii.k141_841116                              3741 40 +     67014 AGCAG-TCA-A-AC-----ACC-TG-T---A-TCCCA-----A-ATTATAA--------------A----------AGCCAAAG
i Saimiri_oerstedii.k141_841116                         I 5 C 0
s Saimiri_sciureus.k141_1947592                              3719 40 +     60816 AGCAG-TCA-A-AC-----ACC-TG-T---A-TCCCA-----A-ATTATAA--------------A----------AGCCAAAG
i Saimiri_sciureus.k141_1947592                         I 5 C 0
s Saimiri_ustus.k141_1282476                                 3656 40 -     76454 AGCAG-TCA-A-AC-----ACC-TG-T---A-TCCCA-----A-ATTATAA--------------A----------AGCCAAAG
i Saimiri_ustus.k141_1282476                            I 5 C 0
s Sapajus_apella.ctg10                                   17340382 40 -  30362882 AGCAG-TCA-A-AC-----ACC-TG-T---C-TCCCA-----A-ACTATAA--------------A----------AGCCAAAG
i Sapajus_apella.ctg10                                  I 5 C 0
s Sapajus_macrocephalus.k141_966464                         19741 40 -     62485 AGCAG-TCA-A-AC-----ACC-TG-T---C-TCCCA-----A-ACTATAA--------------A----------AGCCAAAG
i Sapajus_macrocephalus.k141_966464                     I 5 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   30333 40 -    114521 TACAG-TAA-A-AT-----ATC-T--C---A-TTT--CC-A-A-ATTATAA-A------------T----------G-TCAAAA
i Scalopus_aquaticus.ScaAqu_scaffold_9300               I 5 C 0
s Semnopithecus_entellus.k141_1572367                        2441 40 +     15331 AGCAG-GTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCGAG
i Semnopithecus_entellus.k141_1572367                   I 5 C 0
s Semnopithecus_hypoleucos.k141_761524                       7838 40 +     20762 AGCAG-GTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCGAG
i Semnopithecus_hypoleucos.k141_761524                  I 5 C 0
s Semnopithecus_johnii.k141_785014                         117836 40 +    130994 AGCAG-GTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCGAG
i Semnopithecus_johnii.k141_785014                      I 5 C 0
s Semnopithecus_priam.k141_410937                           36627 40 +     46263 AGCAG-GTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCGGAG
i Semnopithecus_priam.k141_410937                       I 5 C 0
s Semnopithecus_schistaceus.k141_387461                     29741 40 +     42640 AGCAG-GTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCGAG
i Semnopithecus_schistaceus.k141_387461                 I 5 C 0
s Semnopithecus_vetulus.k141_1143185                        12785 40 +     30600 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCGAG
i Semnopithecus_vetulus.k141_1143185                    I 5 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   99346 41 -    120886 TTCAG-TGA-T-AC-----TTC-TG-GCAGT-TCACA-----A-GTTATAA-A------------A----------T-TC--AG
i Sigmodon_hispidus.SigHis_scaffold_11332               I 717 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            16950 43 +    739146 TGCAA-TTT-A-AT-----ATC-A--G---T-TGCTA-ATGCA-GTTATAA-A------------A----------C-CCAGAG
i Solenodon_paradoxus.SolPar_flattened_line_1012        I 3 C 0
s Sorex_araneus.JH798170.1                               17749572 22 -  27805282 TGCAG-TTA-A-CT-----CTC-G--T---C-CCCAA-----------------------------------------------
i Sorex_araneus.JH798170.1                              I 5 I 16
s Spermophilus_dauricus.KZ294190.1                        2238822 41 +   2842873 TGTAG-TTA-AAAA-----TTC-TG-T---C-TCCCA-----A-GTCATAA-A------------A----------T-ACAAGA
i Spermophilus_dauricus.KZ294190.1                      I 5 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             233361 40 -    276980 TGCAG-TCA-A-AT-----ACCTG--T---C-TCCCA-----A-ATTATGA-A------------A----------G-CCAAAG
i Spilogale_gracilis.SpiGra_flattened_line_905          I 5 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            25915 39 +     62062 TGCTG-TTA-T-AT-----ACCTG--T---T-TCCCA-----A-A-TATGA-A------------A----------T-CCAAAG
i Suricata_suricatta.SurSur_flattened_line_20339        I 5 C 0
s Sus_scrofa.CM000824.4                                 189270835 38 + 218635234 TGCAG-TTA-A-AT-----GTCTG--G---C-Tc-ca-----a-aatatga-------a------a----------g--caaag
i Sus_scrofa.CM000824.4                                 I 5 C 0
s Symphalangus_syndactylus.tarseq_24                        13999 40 -  13920577 AGCAG-TTA-A-AC-----ACG-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCTAAG
i Symphalangus_syndactylus.tarseq_24                    I 5 C 0
s Tadarida_brasiliensis.TadBra_scaffold_148405               4857 40 -      6063 ATCAG-TGA-A-AT-----ATC-T-GG---C-TCCCA-----A-ATTATAA-A------------A----------G-CCAAAA
i Tadarida_brasiliensis.TadBra_scaffold_148405          I 904 I 84
s Tamandua_tetradactyla.TamTet_scaffold_26877               13702 39 +     45698 TGTTG-ATA-A--T-----ATT-TG-G---C-TGCCA-----T-ATTATAA-A------------A----------T-CCAAAG
i Tamandua_tetradactyla.TamTet_scaffold_26877           I 5 C 0
s Tapirus_indicus.TapInd_scaffold_176                      805704 40 +   1148477 TGCAG-TTG-A-AT-----GTC-T-GG---C-TCCCA-----A-ATTATAA-A------------A----------G-CCAAAG
i Tapirus_indicus.TapInd_scaffold_176                   I 5 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  56361 40 +     99546 TGCAG-GTG-A-AT-----GTC-T-GG---C-TCCCA-----A-ATTATAA-A------------A----------G-CCAAAG
i Tapirus_terrestris.TapTer_scaffold_14939              I 5 C 0
s Tarsius_lariang.k141_609102                               25523 40 +     42269 TGCAG-TTA-G-AC-----ATC-TC-G---C-TTCCA-----A-ATTATAA--------------A----------AGCCAAAG
i Tarsius_lariang.k141_609102                           I 5 C 0
s Tarsius_wallacei.k141_48636                               58839 40 +     65473 TGCAG-TTA-G-AC-----ATC-TC-G---C-TTCCA-----A-ATTATAA--------------A----------AGCCAAAG
i Tarsius_wallacei.k141_48636                           I 5 C 0
s Theropithecus_gelada.CM009951.1                       194006845 40 - 194193292 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCAAG
i Theropithecus_gelada.CM009951.1                       I 5 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             38351 22 -     47444 --------------------------------CCCCA-----A-ATTATAA-A------------A----------A-CTAAAG
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         I 9 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  4565 40 +      6782 TGCAG-TTA-A-GT-----AAC-TC-G---G-TCCCA-----A-ATACTAA-A------------A----------G-CCAAAG
i Tolypeutes_matacus.TolMat_scaffold_269431             I 5 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  134849 40 -    259118 GGCGA-TTA-A-AT-----ATC-T-GG---C-TCCCA-----A-ATTTAAA-A------------A----------G-TCAAAA
i Tonatia_saurophila.TonSau_scaffold_3334               I 5 C 0
s Trachypithecus_auratus.k141_738098                        25948 40 +     38948 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCGAG
i Trachypithecus_auratus.k141_738098                    I 5 C 0
s Trachypithecus_crepusculus.k141_1588528                   19675 40 -     32910 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCGAG
i Trachypithecus_crepusculus.k141_1588528               I 5 C 0
s Trachypithecus_cristatus.k141_1011511                      1062 40 -     12939 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCGAG
i Trachypithecus_cristatus.k141_1011511                 I 5 C 0
s Trachypithecus_francoisi.k141_768164                        997 40 -     14244 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCGAG
i Trachypithecus_francoisi.k141_768164                  I 5 C 0
s Trachypithecus_geei.k141_670367                           42395 40 -     54611 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCGAG
i Trachypithecus_geei.k141_670367                       I 5 C 0
s Trachypithecus_germaini.k141_868450                         201 40 -     11566 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCGAG
i Trachypithecus_germaini.k141_868450                   I 5 C 0
s Trachypithecus_hatinhensis.k141_504423                     2373 40 -     15592 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCGAG
i Trachypithecus_hatinhensis.k141_504423                I 5 C 0
s Trachypithecus_laotum.k141_760702                          1030 40 +     14371 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCGAG
i Trachypithecus_laotum.k141_760702                     I 5 C 0
s Trachypithecus_leucocephalus.k141_283605                  50782 40 +     51589 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCGAG
i Trachypithecus_leucocephalus.k141_283605              I 5 C 0
s Trachypithecus_melamera.k141_238507                       13963 40 +     14732 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCGAG
i Trachypithecus_melamera.k141_238507                   I 5 C 0
s Trachypithecus_obscurus.k141_1115109                       4435 40 -     28054 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCGAG
i Trachypithecus_obscurus.k141_1115109                  I 5 C 0
s Trachypithecus_phayrei.ctg3                            44659235 40 -  44834318 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCGAG
i Trachypithecus_phayrei.ctg3                           I 5 C 0
s Trachypithecus_pileatus.k141_1022309                       1538 40 +     13828 AGCAG-TTA-A-AC-----ACC-TG-A---C-TCCCA-----A-ATTATAA--------------A----------AGCCCGAG
i Trachypithecus_pileatus.k141_1022309                  I 5 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   4144 40 +     90398 TGCAG-TTA-A-AT-----ATCTG--G---C-TCCCA-----A-AATACAA-A------------A----------G-CCAGAC
i Tragulus_javanicus.TraJav_scaffold_14717              I 5 C 0
s Trichechus_manatus.JH594618.1                          16081553 30 +  31416278 TGTAG-T-A-A-AC-----GTT-AT-G---T-TTCTA-----A-GTTGTAA---------------------------------
i Trichechus_manatus.JH594618.1                         I 5 I 4
s Tupaia_chinensis.KB320831.1                             2791791 48 -   3938065 TGCAG-TTA-A-AC-----ATA-TG-C---C-CCCTA-----A-ACTCTAAGAGTTAAagcattga----------g-a-----
i Tupaia_chinensis.KB320831.1                           I 5 I 261
s Tupaia_tana.TupTan_flattened_line_68454                    4059 35 +     13056 TGCAG-TTA-A-AC-----ATA-TG-C---C-CCCTA-----A-ACTcaga--------g-----a----------g-a-----
i Tupaia_tana.TupTan_flattened_line_68454               I 5 I 206
s Tursiops_truncatus.MRVK01000923.1                      69312403 40 -  96451834 TGCAG-CTA-A-AT-----ATCTG--G---C-CCCCC-----A-AATATGA-A------------A----------G-CCAAAC
i Tursiops_truncatus.MRVK01000923.1                     I 5 C 0
s Uropsilus_gracilis.UroGra_scaffold_139357                   859 40 +      2103 TACAG-TCA-A-AT-----ATC-T--C---C-TTC--CC-C-A-ATTAAAA-A------------T----------G-TCAAAA
i Uropsilus_gracilis.UroGra_scaffold_139357             I 5 C 0
s Ursus_maritimus.KK498671.1                              6513134 40 +  28682327 TGCAG-TTA-A-AT-----ATTTG--G---T-TCCCA-----A-ATTATGA-A------------A----------G-CCAAAG
i Ursus_maritimus.KK498671.1                            I 3 C 0
s Varecia_rubra.k141_432109                                  4317 37 -     20643 TGTAG-TTA-A-AC-----ATC-TG-G---C-TCCCA-----A-ATT---G--------------A----------AGCCACAG
i Varecia_rubra.k141_432109                             I 2 C 0
s Varecia_variegata.k141_775891                             23858 37 -     33872 TGTAG-TTA-A-AC-----ATC-TG-G---C-TCCCA-----A-ATT---G--------------A----------AGCCACAG
i Varecia_variegata.k141_775891                         I 2 C 0
s Vicugna_pacos.KN269600.1                                1523641 40 -   2331223 TGCAG-TTA-T-AT-----ACCTG--G---C-tctca-----a-aatatga-------a------a----------a-tcaaag
i Vicugna_pacos.KN269600.1                              I 5 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                136563 40 -    281493 TGCAG-TTT-A-AT-----ATCTG--G---C-TCCCA-----A-ATTATGA-A------------A----------G-TGAAAG
i Vulpes_lagopus.VulLag_flattened_line_2045             I 5 C 0
s Xerus_inauris.XerIna_scaffold_7898                       125927 40 -    134049 TGTGG-TTA-A-AA-----TTC-TG-G---C-TCCCA-----A-GTCAGAA-A------------A----------G-CCAAGA
i Xerus_inauris.XerIna_scaffold_7898                    I 5 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        212633 40 -    227762 TGCAG-TTA-A-AT-----ACCTG--G---C-TCCCA-----A-ATTATGA-A------------A----------G-CCAAAG
i Zalophus_californianus.ZalCal_flattened_line_4097     I 5 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           5898 40 -      8775 TGCAG-GTA-A-AT-----ATCTG--G---C-TCCCA-----A-AATATGA-A------------A----------G-CCAAAC
i Ziphius_cavirostris.ZipCav_flattened_line_127025      I 5 C 0
e Dinomys_branickii.DinBra_scaffold_1996                   156356 54 +    228994 I
e Orycteropus_afer.OryAfe_flattened_line_13509              43378 16 -     66828 I
e Microgale_talazaci.MicTal_scaffold_34660                  30638 409 -     48017 I
e Manis_pentadactyla.KN017078.1                             35015 87 +     58827 I
e Manis_javanica.JSZB01003966.1                            144940 87 +    252755 I
e Elephantulus_edwardii.JH947210.1                        7804622 10712 +  15467074 I
e Echinops_telfairi.JH980316.1                           22994192 422 -  44670279 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     14107 296 -     20485 I
e Hylobates_pileatus_a.tarseq_592                             33311  5 -     60944 I
e Nomascus_siki_b.tarseq_80                             24175  0 -  18771707 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               11025 20 +    209709 TGTT-CAGATTAAA----TC------A----T---GAG
s Acinonyx_jubatus.LLWD01000356.1                         2032376 18 +   3721120 tgTT-AAGGTTGAA----AG------A----T---A--
i Acinonyx_jubatus.LLWD01000356.1                       C 0 I 632
s Acomys_cahirinus.AcoCah_scaffold_1625                    111682 20 -    189883 AGCT-GCAATTAAA----TG------G----C---GAA
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 I 2
s Ailuropoda_melanoleuca.LNAT01000321.1                  10655698 18 +  23371972 TGTT-gagattaaa----ag------a----t---a--
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 I 627
s Ailurus_fulgens.LNAC01000003.1                          7092863 18 -  16596857 TGTT-GAGATTAAA----AG------A----T---A--
i Ailurus_fulgens.LNAC01000003.1                        I 9 I 610
s Allactaga_bullata.AllBul_scaffold_70162                   12041 20 -     22067 TGTT-TAAATTAAA----TG------A----T---GAA
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                    384  7 -     60446 TGTT-GAG------------------------------
i Allenopithecus_nigroviridis.k141_2469532              C 0 I 5
s Allochrocebus_lhoesti.k141_3566948                         1101 16 -     29318 -----GAGATTAAA----CC------A----T---TAG
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                           38 16 +     38766 -----GAGATTAAA----CC------A----T---TAG
i Allochrocebus_preussi.k141_1108977                    N 0 C 0
s Allochrocebus_solatus.k141_371672                           995 16 -     80423 -----GAGATTAAA----CC------A----T---TAG
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             9290 20 -     18050 TATT-GAGATTAAA----TG------A----T---TAG
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                 10380 20 -     11521 TATT-GAGATTAAA----TG------A----T---TAG
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              9967 20 -     21359 TATT-GAGATTAAA----TG------A----T---TAG
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_298055                                 1263 20 +      1823 TATT-GAGATTAAA----TG------A----T---TAG
i Alouatta_juara.k141_298055                            C 0 C 0
s Alouatta_macconnelli.k141_1331706                          9263 20 -     10438 TATT-GAGATTAAA----TG------A----T---TAG
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            5919 20 +      7047 TATT-GAGATTAAA----TG------A----T---TAG
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             9199 20 +     10410 TATT-GAGATTAAA----TG------A----T---TAG
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            3009 20 -      4927 TATT-GAGATTAAA----TG------A----T---TAG
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             5938 20 +      6429 TATT-GAGATTAAA----TG------A----T---TAG
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3519149 20 +   4113121 TGTT-GAGATTAAA----CA------G----TA-AA--
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      389319 20 -    631301 TGTT-GAGAGTAAA----TG------A----T-CAA--
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            29732 20 +     33004 TGTT-GAGATGAAA----CA------G----TA-AA--
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 61649 20 +     78111 TGTT-GAGATTAAA----TG------A----T---TGA
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            4590 20 +     22701 TGTT-GAGATTAAA----TG------A----T---TGA
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5748547 20 +   9889416 tgtt-gagattaaa----tG------A----T---TGA
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             5132 20 -    104377 TGTT-GAGATTAAA----TG------A----T---TGA
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               5138 20 +     23246 TGTT-GAGATTAAA----TG------A----T---TGA
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     2799 13 +      5067 TGGT-GAAATGAAA------------------------
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 I 4
s Arctocebus_calabarensis.k141_587554                         143 20 +      9265 TGTT-GAGATTAAA----TT------A----T---AAA
i Arctocebus_calabarensis.k141_587554                   N 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 7722 20 -     29036 TGTT-GAGAGTAAA----TG------A----T-CAG--
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9538395 20 +  39197703 TGTT-GAGATTAAA----TG------A----T---TAC
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             59666 20 +     85812 TGTT-GAGATTAAA----TG------A----T---TAC
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                10678 20 +     89302 TGTT-GAGATTAAA----TG------A----T---TAC
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             15183 20 -     58268 TGTT-GAGATTAAA----TG------A----T---TAC
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             63174 20 +    119057 TGTT-GAGATTAAA----TG------A----T---TAC
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               5143 20 -     25888 TGTT-GAGATTAAA----TG------A----T---TAC
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 5767 20 -     16375 TGTT-GAGATTAAA----TT------A----T---AAA
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              2087 20 +      2719 TGTT-GAGATTAAA----TT------A----T---AAA
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26379162 20 +  51448160 TGCT-GAGATTAAA----TA------G----TA-AA--
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        4394 20 -     13118 TGCT-GACATTAAA----TA------G----TA-AA--
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   42212 20 -     72089 TGTT-GAGATTAAA----TA------G----TA-AA--
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6558523 20 +   6870073 TGTT-GAGATtaaa----ta------g----t-aaa--
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138138749 20 - 161108492 TGTT-GAGattaaa----ta------g----t-aaa--
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     571201 20 -    998990 TGTT-GAGattaaa----ta------g----t-aaa--
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136294482 20 - 158972876 TGTT-GAGattaaa----ta------g----t-aaa--
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1230248 20 -   1914593 TGTT-gagattaaa----ta------t----t-aaa--
i Bubalus_bubalis.KI419065.1                            I 16 C 0
s Cacajao_ayresi.k141_724503                               113036 20 -    171031 TGTT-GAGATTAAA----TG------A----T---TAG
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 12064 20 +    125063 TGTT-GAGATTAAA----TG------A----T---TAG
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                14109 20 -    216513 TGTT-GAGATTAAA----TG------A----T---TAG
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        6649 20 -    134917 TGTT-GAGATTAAA----TG------A----T---TAG
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3218574 21 -   8989139 cGTT-GAGATTAAA----CA------G----AATAC--
i Camelus_bactrianus.KN276303.1                         C 0 I 11
s Camelus_dromedarius.KN271192.1                           396279 21 -  15254737 cGTT-GAGATTAAA----CA------G----AATAC--
i Camelus_dromedarius.KN271192.1                        C 0 I 11
s Camelus_ferus.KB016973.1                                2972012 21 +   6889770 cGTT-GAGATTAAA----CA------G----AATAC--
i Camelus_ferus.KB016973.1                              C 0 I 11
s CanFam4.chr31                                          11517548 18 +  39901454 TGTT-GGGATTGAA----AG------G----T---A--
i CanFam4.chr31                                         C 0 I 543
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   12573 18 +     87036 TGTT-GGGATTGAA----AG------G----T---A--
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 I 542
s Canis_lupus_dingo.QKWQ01001993.1                       11264213 18 -  35597290 TGTT-GGGATTGAA----AG------G----T---A--
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 I 542
s Canis_lupus_familiaris.chr31                           11086745 18 +  39895921 TGTT-GGGATTGAA----AG------G----T---A--
i Canis_lupus_familiaris.chr31                          C 0 I 543
s Canis_lupus_orion.HG994411.1                           16453764 18 -  44759192 TGTT-GGGATTGAA----AG------G----T---A--
i Canis_lupus_orion.HG994411.1                          C 0 I 543
s Capra_aegagrus.CM003214.1                              21324225 20 + 157394656 TGTT-GAGATtaaa----ta------g----t-aaa--
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135705452 20 - 157403528 TGTT-GAGATtaaa----ta------g----t-aaa--
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_979108                  1036 20 -      1248 AACA-AAACTCAAA----AG------A----T---AAA
i Capromys_pilorides.CapPil_scaffold_979108             C 0 C 0
s Carlito_syrichta.NW_007248099.1                          308079 20 +    345090 TGTT-TAGATTAAA----TG------A----T---AAA
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               58520 20 +     67245 TGCT-GAGAGTAAA----TG------A----T-CAA--
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   29729 20 +     33760 TGTT-GAAATTTAA----TA------A----T---GAA
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   157785 20 -    276539 TGTT-GGGATTAAA----TA------A----GA-AA--
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15785666 20 -  24422027 Tata-gaaatcaaa----tg------a----t---aaa
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15797600 20 -  24440124 Tata-gaaatcaaa----tg------a----t---aaa
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       175791 20 +    436027 TATA-GAAATCAAA----TG------A----T---AAA
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18889879 20 -  29618158 TGTT-GAGATTAAA----TG------A----T---TCA
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 7423 20 -     26817 TGTT-GAGATTAAA----TG------A----T---TCA
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                11663 20 +     25043 TGTT-GAGATTAAA----TG------A----T---TCA
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         7112 20 +     21754 TGTT-TAGATTAAA----TG------A----T---AAA
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4362888 18 +   7569818 TGTT-GAGATTAAA----TT------A----T---A--
i Ceratotherium_simum.JH767818.1                        C 0 I 2
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         2640 18 -      9338 TGTT-GAGATTAAA----TT------A----T---A--
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 I 2
s Cercocebus_atys.KQ010443.1                              6554319 20 +   6739814 TGTT-GAGATTAAA----CC------A----T---TAG
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      25796 20 +     60454 TGTT-GAGATTAAA----CC------A----T---TAG
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          1001 20 -     21101 TGTT-GAGATTAAA----CC------A----T---TAG
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         58311 20 -    107033 TGTT-GAGATTAAA----CC------A----T---TAG
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        1203 20 -     17608 TGTT-GAGATTAAA----CC------A----T---TAG
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          28698 20 +     30494 TGTT-GAGATTAAA----CC------A----T---TAG
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          57544 20 -     59240 TGTT-GAGATTAAA----CC------A----T---TAG
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          1245 20 +     16677 TGTT-GAGATTAAA----CC------A----T---TAG
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           23403 20 +     35983 TGTT-GAGATTAAA----CC------A----T---TAG
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11989931 20 +  12117833 TGTT-GAGATTAAA----CC------A----T---TAG
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46476689 20 +  46592721 TGTT-GAGATTAAA----CC------A----T---TAG
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      40240 20 -     45581 TGTT-GAGATTAAA----CC------A----T---TAG
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       1246 20 +     35577 TGTT-GAGATTAAA----CC------A----T---TAG
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        1022 20 -     25661 TGTT-GAGATTAAA----CC------A----T---TAG
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        1000 20 -     17744 TGTT-GAGATTAAA----CC------A----T---TAG
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        20609 20 +     37128 TGCT-GAGATTAAA----CC------A----T---TAG
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           1834 14 -      6963 TGTT-GATATTAAA----T-------------------
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 I 3
s Cheirogaleus_major.k141_1157592                           58064 20 -     68416 TGTT-GAGATTAAA----TT------A----T---AAA
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            7107 20 +     13308 TGTT-GAGATTAAA----TT------A----T---AAA
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             4679 20 -     18223 TGTT-GAGATTAAA----TG------A----T---TAG
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             21702 20 +     25473 TGTT-GAGATTAAA----TG------A----T---TAG
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           40737 20 +     57117 TGTT-GAGATTAAA----TG------A----T---TAG
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          45416 20 +     54541 TGTT-GAGATTAAA----TG------A----T---TAG
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15960813 20 +  43084221 TATT-GAAATCAAA----TG------A----T---AAA
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         70238 20 +    196370 TGTT-GAGATTAAA----TG------A----T---TAG
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          14418 20 +     40510 TGTT-GAGATTAAA----TG------A----T---TAG
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15138162 20 -  15256731 TGTT-GAGATTAAA----CC------A----T---TAG
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      33209 20 -     53260 TGTT-GAGATTAAA----CC------A----T---TAG
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101143773 20 + 101219884 TGTT-GAGATTAAA----CC------A----T---TAG
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                15506 20 -     21363 TATT-GATATTAAA----TG------A----C---AAA
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           760814 20 +    964067 TATT-GATATTAAA----TG------A----C---AAA
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10885539 20 +  10971483 TGTT-GAGATTAAA----CC------A----T---TAG
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147663703 20 + 156195979 TGTT-GAGATTAAA----CC------A----T---TAG
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            15688 20 +     23629 TGTT-GAGATTAAA----CC------A----T---TAG
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60611630 17 +  78930452 tgtt-gacattaaa----ta------a----t------
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         38631 20 -     40477 CGTT-GAGATTAAA----TG------A----TA-AA--
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 277604 20 -    399297 TGTT-GAAATTAAA----TG------A----C---AAG
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 I 2
s Cricetulus_griseus.LT883672.1                          53028280 20 +  72327488 TGTT-GAAATGAAA----AG------A----C---GAA
i Cricetulus_griseus.LT883672.1                         C 0 I 9
s Crocidura_indochinensis.CroInd_scaffold_38409             18699 22 -     19186 TGTT-AAAGTTAAA----TT------AAATAG---T--
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 I 2
s Cryptoprocta_ferox.CryFer_flattened_line_19014            50391 18 -     70449 TGTT-AAAATTAAA----AG------A----T---A--
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 I 627
s Ctenodactylus_gundi.CteGun_scaffold_447                  207247 20 -    956709 TGTT-AAAATTAAA----TG------A----C---AAA
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 29813 21 -     67205 TACACAAAATCAAA----TG------A----T---AAA
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                16822 20 +     26546 TATT-GAAATCAAA----TG------A----C---AAA
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             57914 20 -    236241 TATT-GAAATAAAA----TT------A----T---AAA
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          182669 20 -   6883506 TGTT-GGtattaaa----tg------a----t---aaa
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16843923 20 +  31942871 TGTT-GAGATTAAA----TT------A----T---AAA
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80035841 20 -  96802777 TGCT-GAGATTAAG----TA------G----TA-AA--
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18697829 20 -  18957592 TGTT-GAGAGCAAA----TG------A----T-CAG--
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 321535 18 +    993696 TGTT-GAGATTAAA----TT------A----T---A--
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 I 2
s Diceros_bicornis.DicBicMic_scaffold_9545                   2187 18 +    151128 TGTT-GAGATTAAA----TT------A----T---A--
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 I 2
s Dipodomys_ordii.KN672545.1                              3655221 16 +   4240102 TTAT-GAAAC--------TG------A----A---TAA
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 26854 16 +     28912 TTAT-GAAAC--------TG------A----A---TAA
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                35161 20 -     73477 TATA-GAAATCAAA----TG------A----C---AAA
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Eidolon_helvum.KE772537.1                                 11197 20 +     24177 TGTT-gagattaaa----tg------a----t-aaa--
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1490499 20 +   1727528 TGTT-GAGATTAAA----TA------G----TA-AA--
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        238837 20 -    369425 tgtt-gaaattaaa----tg------A----C---AAA
i Ellobius_lutescens.LOEQ01003611.1                     C 0 I 9
s Ellobius_talpinus.LOJH01090055.1                           5950 20 -      7838 TGCT-GAAATTACA----TG------A----C---AAA
i Ellobius_talpinus.LOJH01090055.1                      C 0 I 9
s Enhydra_lutris.KZ291749.1                              85870379 18 +  99434291 TGTT-GAGATTAAA----AG------A----T---A--
i Enhydra_lutris.KZ291749.1                             C 0 I 801
s Eptesicus_fuscus.JH977687.1                             4703215 20 +   6522550 TGTT-GATGTTAAA----TG------G----TA-AG--
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5851952 18 -   7175178 tctt-caGATTAAA----TG------A----T---A--
i Equus_asinus.JREZ01000062.1                           C 0 I 2
s Equus_caballus.CM000402.2                              13350455 18 +  41866177 tctt-caGATTAAA----TG------A----T---A--
i Equus_caballus.CM000402.2                             C 0 I 2
s Equus_przewalskii.ATBW01073585.1                          11945 18 +     92910 tctt-caGATTAAA----TG------A----T---A--
i Equus_przewalskii.ATBW01073585.1                      C 0 I 2
s Erinaceus_europaeus.JH835290.1                         11531501 18 +  16010500 TTCT-GAAGTTAAG----AG------A----T---A--
i Erinaceus_europaeus.JH835290.1                        C 0 I 2
s Erythrocebus_patas.Contig8                             48770340 20 -  48907691 TGTT-GAGATTAAA----CC------A----T---TAG
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          314047 20 +    330699 TGCT-GAGATTAAA----TA------G----TA-AA--
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             60501 20 +     89355 TGCT-GATATTAAA----TA------G----TA-AA--
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              4108 20 +     13586 TGTT-GAGATTGAA----TT------A----T---AAA
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               4045 20 -      6809 TGTT-GAGATTGAA----TT------A----T---AAA
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            10518 20 +     36558 TGTT-GAGATTGAA----TT------A----T---AAA
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             6837 20 +     60246 TGTT-GAGATTGAA----TT------A----T---AAA
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                10316 20 +    109717 TGTT-GAGATTGAA----TT------A----T---AAA
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               14699 20 +     16540 TGTT-GAGATTGAA----TT------A----T---AAA
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                14972 20 +     27497 TGTT-GAGATTGAA----TT------A----T---AAA
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           17429 20 +     26808 TGTT-GAGATTGAA----TT------A----T---AAA
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                32164 20 +     46535 TGTT-GAGATTGAA----TT------A----T---AAA
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              14886 20 -     29447 TGTT-GAGATTGAA----TT------A----T---AAA
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129891352 18 - 159252932 tgTT-AAGGTTGAA----AG------A----T---A--
i Felis_catus.CM001386.2                                C 0 I 635
s Felis_catus_fca126.CM031420.1                         129278424 18 - 158578461 tgTT-AAGGTTGAA----AG------A----T---A--
i Felis_catus_fca126.CM031420.1                         C 0 I 632
s Felis_nigripes.FelNig_flattened_line_8080                 19559 18 +     52776 TGTT-AAGGTTGAA----AG------A----T---A--
i Felis_nigripes.FelNig_flattened_line_8080             C 0 I 642
s Fukomys_damarensis.KN123630.1                          13891777  6 -  19261668 gaTT-TA-------------------------------
i Fukomys_damarensis.KN123630.1                         C 0 I 308
s Galago_moholi.ctg555                                     210016 20 -    847004 TGTT-GAGATTAAA----TC------A----T---AAT
i Galago_moholi.ctg555                                  C 0 I 27
s Galago_senegalensis.k141_964197                           12395 20 -     43889 TGTT-GAGATTAAA----TC------A----T---AAT
i Galago_senegalensis.k141_964197                       C 0 I 27
s Galagoides_demidoff.k141_1769638                           9463 20 +     27357 TGTT-GAGATTAAA----TT------A----T---AAA
i Galagoides_demidoff.k141_1769638                      C 0 I 27
s Galeopterus_variegatus.GalVar_scaffold_354               155335 20 +    324696 GTTT-TAAATTAAA----TG------A----T---GAA
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    180299 20 -    189561 TGTT-GAGattaaa----ta------g----t-taa--
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           12183 24 -     18683 TGTT-GAAATCAACACTTTG------A----C---AAA
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               4405 20 -     14630 TGTT-GAGGTTAAA----TC------A----T---TAG
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119651504 20 - 195582420 TGTT-GAGGTTAAA----TC------A----T---TAG
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   76680 20 +    118900 AATT-GAAGTCAAA----CA------A----C---AAA
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                          909 20 +     10286 TGTT-GAGATTGAA----TT------A----T---AAA
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_1254239                            9085 20 +      9690 TGTT-GAGATTGAA----TT------A----T---AAA
i Hapalemur_gilberti.k141_1254239                       C 0 C 0
s Hapalemur_griseus.k141_1387522                             4714 20 +     56096 TGTT-GAGATTGAA----TT------A----T---AAA
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        27964 20 -     42470 TGTT-GAGATTGAA----TT------A----T---AAA
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        44588 20 -     54384 TGTT-GCGATTGAA----TT------A----T---AAA
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              15598 18 +     53719 TGTT-ACAATGAAA----AG------A----T---A--
i Helogale_parvula.HelPar_flattened_line_22962          C 0 I 626
s Hemitragus_hylocrius.HemHyl_scaffold_16669                26497 20 -     91191 TGTT-GAGATTAAA----TA------G----TA-AA--
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2550146 20 +  31725842 taTT-GAAATCAAA----TG------A----T---AAA
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               56596 13 +     73687 --------GTTAAA----GG------A----G---AAA
i Heterohyrax_brucei.HetBruBak_scaffold_25354           I 11 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              146122 20 +    277961 TGTT-GAGATTAAA----AA------G----TA-AA--
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      277411 20 -    477199 TGTT-Gagattaaa----tg------a----t-aaa--
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              6570 20 -      9143 TGTT-GAGATTAAA----TG------A----TA-AA--
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg649                                   102834 20 +    115816 TGTT-GAGATTAAA----TC------A----T---TAG
i Hoolock_leuconedys.ctg649                                C 0 I 112
s Hyaena_hyaena.HyaHya_flattened_line_20729                 14717 18 -     67322 TGTT-AAAATTAAA----AG------A----T---A--
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 I 1592
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           18040 20 -    119109 TATA-GAAATCAAA----TG------A----T---AAA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              4237 20 +      5897 TGTT-GAGATTAAA----TC------A----T---TAG
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_624065                               1101 20 +      2112 TGTT-GAGATTAAA----TC------A----T---TAG
i Hylobates_agilis.k141_624065                          C 0 C 0
s Hylobates_klossii.k141_466549                             10677 20 +     11537 TGTT-GAGATTAAA----TC------A----T---TAG
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14623782 20 -  25970782 TGTT-GAGATTAAA----TC------A----T---TAG
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            1038 20 -      2977 TGTT-GAGATTAAA----TC------A----T---TAG
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     5216 20 +     22540 TATT-GAAATCAAA----TG------A----C---AAA
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7124943 15 +  13083262 TAGT-GAAATTAAA----C-------A-----------
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 I 3
s Indri_indri.k141_4418183                                    528 20 -      1457 TGTT-AAGATTAAA----TT------A----T---AAA
i Indri_indri.k141_4418183                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               8041 20 +     17520 TGCT-GAGATTAAG----TA------G----TA-AA--
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8564772 20 +  11848649 TGTT-TAAATTAAA----TG------G----T---GAA
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               22661 20 +     37189 TGCT-GAGATTAAG----TA------G----TA-AA--
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          49259 20 -    147782 TGTT-GAGATTAAA----TG------A----T---TAG
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   113062 20 -    115756 TGTT-GATGTTAAA----TG------A----TA-AG--
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258406269 20 - 285822530 TGTT-GAGATTGAA----TT------A----T---AAA
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        23021 20 +     39228 TGTT-GAGATTAAA----TT------A----T---AAA
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            52396 20 +     63517 TGTT-GAGATTAAA----TT------A----T---AAA
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        77646 20 +    116806 TGTT-GAGATTAAA----TT------A----T---AAA
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     30660 20 -     33031 TGTT-GAGATTAAA----TT------A----T---AAA
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3084393 16 -   3498232 TGTT-GAGATTAAA----AG------A-----------
i Leptonychotes_weddellii.KB714749.1                    C 0 I 594
s Lepus_americanus.LepAme_scaffold_62849                    12025 20 +     22452 TATT-GAAATTAAA----TG------A----T---AAA
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            134994 20 +   3060487 TGCt-aagattaag----ta------g----t-aag--
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19247408 20 +  19376315 TGTT-GAGATTAAA----CC------A----T---TAG
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            9780 20 +     84689 TGTT-GAGATTAAA----TT------A----T---AAC
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3777529 20 +   6799190 TGTT-GAGATTAAA----TT------A----T---AAC
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20591124 13 -  62548349 --------atttaa----ta------a----g---aaa
i Loxodonta_africana.GL010040.1                         I 4 C 0
s Lycaon_pictus.CM007556.1                               11086201 18 +  39895028 TGTT-GGGATTGAA----AG------G----T---A--
i Lycaon_pictus.CM007556.1                              C 0 I 543
s Macaca_arctoides.k141_2201161                             19148 20 +     74745 TGTT-GAGATTAAA----GC------A----T---TAG
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12705604 20 +  12821369 TGTT-GAGATTAAA----GC------A----T---TAG
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                1249 20 -      3136 TGTT-GAGATTAAA----GC------A----T---TAG
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           46066 20 +     63263 TGTT-GAGATTAAA----GC------A----T---TAG
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                  769 20 -      2568 TGTT-GAGATTAAA----GC------A----T---TAG
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 1355 20 -      7381 TGTT-GAGATTAAA----GC------A----T---TAG
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  44573 20 -     79256 TGTT-GAGATTAAA----GC------A----T---TAG
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196034681 20 + 196197964 TGTT-GAGATTAAA----GC------A----T---TAG
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11444848 20 +  11645122 TGTT-GAGATTAAA----GC------A----T---TAG
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   3520 20 -     46448 TGTT-GAGATTAAA----GC------A----T---TAG
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                1192 20 -     13212 TGTT-GAGATTAAA----GC------A----T---TAG
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 14872 20 -     55006 TGTT-GAGATTAAA----GC------A----T---TAG
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43839990 20 +  43892939 TGTT-GAGATTAAA----GC------A----T---TAG
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               16159 20 -     24607 TGTT-GAGATTAAA----GC------A----T---TAG
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               3525 20 -     27140 TGTT-GAGATTAAA----GC------A----T---TAG
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                700611 20 +    802869 TGTT-GAGATTAAA----TG------A----TA-AA--
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43436567 20 -  43563597 TGTT-GAGATTAAA----CC------A----T---TAG
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4449393 20 -   4543643 TGTT-GAGATTAAA----CC------A----T---TAG
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36872782 15 +  64221397 TAGT-GAAATTAAA----C-------A-----------
i Marmota_marmota.CZRN01000005.1                        C 0 I 3
s Megaderma_lyra.MegLyr_scaffold_3562                       63411 26 -    234502 TATT-GAGATTAAG----TGCTATTAA----TA-AA--
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_146202             986 18 -      1999 TATT-GAGATTAAA----AG------A----T---A--
i Mellivora_capensis.MelCap_flattened_line_146202       C 0 I 794
s Meriones_unguiculatus.MerUng_scaffold_52233               11785 20 +     15977 CATT-GAAATCAAA----CG------A----C---AAA
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 I 2
s Mesocricetus_auratus.KB708139.1                         1045989 20 -  26018355 TGTT-GAAATTAAA----CC------A----C---GAG
i Mesocricetus_auratus.KB708139.1                       C 0 I 2
s Microcebus_murinus.CM007691.1                          16509274 20 +  47401472 tgtt-gagattaaa----tt------a----t---aaa
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               21704 20 -     32043 TGTT-GAGAGTAAA----TG------A----T-CAA--
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22819130 20 -  98408828 TGCT-GAAATTAAA----TG------A----C---AAA
i Microtus_ochrogaster.CM001673.1                       C 0 I 9
s Miniopterus_natalensis.LDJU01000022.1                   8208699 20 +  10048721 TACT-GAAAGTAAA----TG------A----TA-AA--
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            33356 20 +     45743 TACT-GAAAGTAAA----TG------A----TA-AA--
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         1120 20 +     29742 TGTT-GAGATTAAA----CC------A----T---TAG
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852         9901 16 -    104932 TGTT-GAGATTAAA----AG------A-----------
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 I 599
s Mirza_zaza.k141_226143                                     4664 20 +      8497 TGTT-GAGATTAAA----TT------A----T---AAA
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 145429 20 +    154973 TGCT-GAGATTAAG----TA------G----TA-AA--
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                160215 20 +    265003 CGTT-GAGAGTAAA----TG------A----T-CAA--
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 3600 20 -      4346 TGTT-GAGATTAAA----TA------G----TA-AA--
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  143289 18 -    168139 TGTT-AAAATGAAA----AG------A----T---A--
i Mungos_mungo.MunMun_flattened_line_8729               C 0 I 631
s Murina_feae.MurFea_scaffold_2254                          18575 20 -    100666 TGTT-GATGTTAAA----TG------A----TA-AG--
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70765635 20 +  92629107 TGTT-GAAATTAAA----TG------A----C---AAA
i Mus_caroli.LT608236.1                                 C 0 I 2
s Mus_musculus.chr16                                     75488673 20 +  98207768 TGTT-GAAATTAAA----TG------A----C---AAG
i Mus_musculus.chr16                                    C 0 I 2
s Mus_pahari.LT608305.1                                  67554908 20 +  89017189 TGTT-GAAATTAAA----TG------A----C---AAA
i Mus_pahari.LT608305.1                                 C 0 I 2
s Mus_spretus.CM004110.1                                 74329852 20 +  97876770 TGTT-GAAATTAAA----TG------A----C---AAG
i Mus_spretus.CM004110.1                                C 0 I 2
s Muscardinus_avellanarius.MusAve_scaffold_9643             10665 20 +     98495 TGTT-AAAATGAAA----TG------A----T---AAA
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4422558 18 -  28371801 TGTG-GAGATTAAA----AG------A----T---A--
i Mustela_putorius.JH417978.1                           C 0 I 800
s Myocastor_coypus.MyoCoy_scaffold_3653                     89097 20 -    117718 AGCA-AAACTCAAA----AG------A----T---AAA
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               966880  6 +   8389877 TGTT-GA-------------------------------
i Myotis_brandtii.KE161952.1                            C 0 I 4
s Myotis_davidii.KB114863.1                               5018556  6 +   6462685 TGTT-GA-------------------------------
i Myotis_davidii.KB114863.1                             C 0 I 4
s Myotis_lucifugus.GL429887.1                             3464460  6 -   3747815 TGTT-GA-------------------------------
i Myotis_lucifugus.GL429887.1                           C 0 I 4
s Myotis_myotis.MyoMyo_scaffold_6123                         9675  6 +     66751 TATT-GA-------------------------------
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 I 4
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             4066 19 -      8794 TATT-GATATTAAA-----G------A----T---AAA
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            117465 14 +    362372 TCCA-------CAG----TG------A----C---AAA
i Nannospalax_galili.KL201303.1                         C 0 I 1
s Nasalis_larvatus.k141_153429                               7622 20 +     48152 TGTT-GAGATTAAA----CC------A----T---TAG
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4483292 16 -  14209539 TGTT-GAGATTAAA----AG------A-----------
i Neomonachus_schauinslandi.NINY01007774.1              C 0 I 600
s Neophocaena_asiaeorientalis.KZ688543.1                  3950043 20 -   4490290 TGCT-GAGATTAAG----TA------G----TA-AA--
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  48319 20 +     94413 TGTT-GAGGTTAAA----TG------A----T-CAG--
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_302224                            1079 20 +      1516 TGTT-GAGATTAAA----TC------A----T---TAG
i Nomascus_annamensis.k141_302224                       I 50 I 26
s Nomascus_concolor.k141_226614                               339 20 -      5092 TGTT-GAGATTAAA----TC------A----T---TAG
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_642452                            1122 20 +      2851 TGTT-GAGATTAAA----TC------A----T---TAG
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_a.k141_595747                                  1760 20 +      4512 TGTT-GAGATTAAA----TC------A----T---TAG
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                29230 18 +   3668941 TGTT-GGGATTGAA----AG------G----T---A--
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 I 542
s Nycticebus_bengalensis.LG16                            65566214 20 -  95554990 TGTT-GAGATTCAA----CT------A----T---AAA
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            2943 20 +      6470 TGTT-GAGATTCAA----CT------A----T---AAA
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65668552 20 +  89412551 TGTT-GAGATTCAA----CT------A----T---AAA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4995110 20 -  23139505 TACT-GAGACTAAG----TG------A----T---AAA
i Ochotona_princeps.JH802095.1                          C 0 I 2
s Octodon_degus.JH651621.1                                3684639 20 +  10294119 taca-aaaatcaaa----tg------a----t---aaa
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             677938 18 -   3126709 TGTT-GAGATTAAA----AG------A----T---A--
i Odobenus_rosmarus.KB229369.1                          C 0 I 616
s Odocoileus_virginianus.KZ101650.1                       1078730 20 +   1425656 TGTT-GAGATTAAA----TA------G----TA-AA--
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         36025 20 +     78940 TGTT-GAGATTAAA----TA------G----T-TAA--
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  124387 20 +    145789 TGCT-GAAATTAAA----TG------A----C---AAA
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 I 9
s Onychomys_torridus.OnyTor_scaffold_12578                  36188 20 +     62360 TGTT-GAAATTAAA----TG------A----C---AAA
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 I 2
s Orcinus_orca.KB316965.1                                 7223726 20 -   7562323 TGCT-GAGATTAAG----TA------G----TA-AA--
i Orcinus_orca.KB316965.1                               C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141875044 20 + 163896628 Tatt-gaaattaaa----tg------a----t---aaa
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      306518 18 -    505867 TGTT-GGGATTGAA----AG------G----T---A--
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 I 536
s Otolemur_crassicaudatus.k141_321880                       38112 20 +     38679 TGTT-GAGATTAAA----TT------A----T---AAT
i Otolemur_crassicaudatus.k141_321880                   C 0 I 27
s Otolemur_garnettii.GL873528.1                          18007540 20 -  38779656 TGTT-GAGattaaa----tt------a----t---aat
i Otolemur_garnettii.GL873528.1                         C 0 I 27
s Ovis_aries.CM001582.2                                 134076291 20 - 275406953 TGTT-GAGATTAAA----TA------G----TA-AA--
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      77505 20 +    140051 TGTT-GAGATTAAA----TA------G----TA-AA--
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.AJFE02000033.1                                  95 20 -      1012 TGTT-GAGATTAAA----TC------A----T---TAG
i Pan_paniscus.AJFE02000033.1                           C 0 I 69
s Pan_troglodytes.NBAG03003562.1                            12232 20 +     18198 TGTT-GAGATTAAA----TC------A----T---GAG
i Pan_troglodytes.NBAG03003562.1                        I 122 I 150
s Panthera_onca.PanOnc_flattened_line_1615                  32753 18 +    295523 TGTT-AAGGTTGAA----AG------A----T---A--
i Panthera_onca.PanOnc_flattened_line_1615              C 0 I 612
s Panthera_pardus.KV860323.1                              3636487 18 +  18214204 tgTT-AAGGTTGAA----AG------A----T---A--
i Panthera_pardus.KV860323.1                            C 0 I 614
s Panthera_tigris.KE721879.1                              5026134 18 -   6340057 tgTT-AAGGTTGAA----AG------A----T---A--
i Panthera_tigris.KE721879.1                            C 0 I 626
s Pantholops_hodgsonii.KE114631.1                         1065152 20 -   1292953 TGTT-GAGATTAAA----TA------G----TA-AA--
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188155358 20 - 188283584 TGTT-GAGATTAAA----CC------A----T---TAG
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             3675 20 +      5367 TGTT-GAGATTAAA----CC------A----T---TAG
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47512746 20 +  47705337 TGTT-GAGATTAAA----CC------A----T---TAG
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 66724 20 -    104429 TGTT-GAGATTAAA----CC------A----T---TAG
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    5256 20 +     14967 TGTT-GAGATTAAA----CC------A----T---TAG
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 1117 20 -      7628 TGTT-GAGATTAAA----CC------A----T---TAG
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    114070 18 -    135482 TGTT-ATGATTAAA----CG------A----T---A--
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 I 723
s Perodicticus_ibeanus.k141_117958                           4526 20 -     23713 TGTT-GAGATTTAA----TT------A----T---AAA
i Perodicticus_ibeanus.k141_117958                      I 1 C 0
s Perodicticus_potto.k141_713187                            23835 20 -     27972 TGTT-GAGATTTAA----TT------A----T---AAA
i Perodicticus_potto.k141_713187                        I 1 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      42691 16 -     45160 TTAT-CAAAT--------TG------A----C---AAA
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4949420 20 -   8017169 TGTT-GAAATTCAA----TG------A----C---AAA
i Peromyscus_maniculatus.KI615518.1                     C 0 I 2
s Petromus_typicus.PetTyp_scaffold_33007                    11575 20 -     36578 TATG-GAAATCCAA----TG------A----G---AAA
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            120343 20 -    122454 TGCT-GAGATTAAG----TA------G----TA-AA--
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1987485                           1144 20 -      5908 TGTT-GAGATTAAA----CC------A----T---TAG
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       1764 20 -     17985 TGTT-GAGATTAAA----CC------A----T---TAG
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            1131 20 +      7694 TGTT-GAGATTAAA----CC------A----T---TAG
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26739609 20 +  26888534 TGTT-GAGATTAAA----CC------A----T---TAG
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            96502 20 +    112873 TGTT-GATGTTAAA----TG------A----TA-AG--
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             42741 20 -     61926 TGTT-GAGATTAAA----TG------A----T---TAG
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        24172 20 +     78826 TGTT-GAGATTAAA----TG------A----T---TAG
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              8121 20 -     15800 TGTT-GAGATTAAA----TG------A----T---TAG
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        11319 20 -     16101 TGTT-GAGATTAAA----TG------A----T---TAG
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          4628 20 +      9673 TGTT-GAGATTAAA----TG------A----T---TAG
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13473624 20 -  19735023 TGTT-GAGATTAAA----TG------A----T---TAG
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           12530 20 -     31692 TGTT-GAGATTAAA----TG------A----T---TAG
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           4411 20 +     21690 TGCT-GAGATTAAG----TA------G----TA-AA--
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       21965 20 +     44506 TGTT-GAGATTAAA----TG------A----T---TAG
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        22177 20 +     67491 TGTT-GAGATTAAA----TG------A----T---TAG
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      12416 20 -     98129 TGTT-GAGATTAAA----TG------A----T---TAG
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     22016 20 +    147771 TGTT-GAGATTAAA----TG------A----T---TAG
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        22271 20 -     23762 TGTT-GAGATTAAA----TG------A----T---TAG
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          2737 20 -     55515 TGTT-GAGATTAAA----TG------A----T---TAG
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         22090 20 +    152463 TGTT-GAGATTAAA----TG------A----T---TAG
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      8850 20 +      8943 TGTT-GAGATTAAA----TG------A----T---TAG
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                         11812 20 +    134592 TGTT-GAGATTAAA----TG------A----T---TAG
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          22400 20 -     75465 TGTT-GAGATTAAA----TG------A----T---TAG
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              186290 20 -    373494 TGTT-GAGATTAAA----TC------A----T---TAG
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19806938 20 +  19899266 TGTT-GAGATTAAA----TC------A----T---TAG
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               4866 20 -     15069 TGTT-GAGATTAAA----CC------A----T---TAG
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              5000 20 +     14865 TGTT-GAGATTAAA----CC------A----T---TAG
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                76460 13 +     78963 --------GTTAAA----GG------A----G---AAA
i Procavia_capensis.ProCapCap_scaffold_15315            I 11 C 0
s Prolemur_simus.MPIZ01000048.1                           6847650 20 +  12164890 TGTT-GAGATTGAA----TT------A----T---AAA
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    666869 20 -   2312742 tgtt-gagattaaa----tt------a----t---aaa
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         2696 20 +     11805 TGTT-GAGATTAAA----TT------A----T---AAA
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           42032 20 +     52369 TGTT-GAGATTAAA----TT------A----T---AAA
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         34422 20 -     44753 TGTT-GAGATTAAA----TT------A----T---AAA
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            16342 20 +     27322 TGTT-GAGATTAAA----TT------A----T---AAA
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       15978 20 -     53241 TGTT-GAGATTAAA----TT------A----T---AAA
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         38250 20 -     48185 TGTT-GAGATTAAA----TT------A----T---AAA
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           33321 20 +     77221 TCTT-GAAATCAAA----TG------A----C---AAA
i Psammomys_obesus.NESX01026517.1                       C 0 I 2
s Pteronotus_parnellii.KE867983.1                            2883 20 -     27784 tgtt-GGGAGTAAA----TG------A----T-CAA--
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        244863 18 -    344369 TGTT-GAGATTAAA----AG------A----T---A--
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 I 805
s Pteropus_alecto.KB031157.1                             13244998 20 -  17261082 tgtT-GAGATTAAA----TG------G----TA-AA--
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             602948 20 -   3946241 tgtT-GAGATTAAA----TG------G----TA-AA--
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131532717 18 - 161321710 tgTT-AAGGTTGAA----AG------A----T---A--
i Puma_concolor.QAVW01000427.1                          C 0 I 628
s Pygathrix_cinerea.k141_374971                             28984 20 +     56732 TGTT-GAGATTAAA----CC------A----T---TAG
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6805475 20 +   6970761 TGTT-GAGATTAAA----CC------A----T---TAG
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             4869 20 +     18040 TGTT-GAGATTAAA----CC------A----T---TAG
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                14807 20 +     68503 TGTT-GAGATTAAA----TA------G----TA-AA--
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13914607 20 +  90463843 TGCT-GAAATAAAA----TG------A----C---AAA
i Rattus_norvegicus.chr11                               C 0 I 2
s Rhinolophus_sinicus.LVEH01000179.1                      1786813 20 +   2252614 TGTT-GAGATTAAA----TG------A----T-GAA--
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_1391695                           1097 20 -      1866 TGTT-GAGATTAAA----CC------A----T---TAG
i Rhinopithecus_bieti.k119_1391695                      C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206376754 20 - 206558726 TGTT-GAGATTAAA----CC------A----T---TAG
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44855654 20 -  45163003 TGTT-GAGATTAAA----CC------A----T---TAG
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                18288 20 +    109198 TGTT-GAAATTAAA----TG------A----TA-AA--
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       6608 20 +     12214 TGTT-GAAATTAAA----TA------G----TA-AA--
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15671828 20 -  43202129 tgtt-gagattaaa----tG------A----T---TCA
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        3745 20 +     34089 TGTT-GAGATTAAA----TG------A----T---TCA
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              3686 20 -     60842 TGTT-GAGATTAAA----TG------A----T---TCA
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              3781 20 +     67014 TGTT-GAGATTAAA----TG------A----T---TCA
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              3759 20 +     60816 TGTT-GAGATTAAA----TG------A----T---TCA
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 3696 20 -     76454 TGTT-GAGATTAAA----TG------A----T---TCA
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17340422 20 -  30362882 TGTT-GAGATTAAA----TG------A----T---TCA
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         19781 20 -     62485 TGTT-GAGATTAAA----TG------A----T---TCA
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   30373 17 -    114521 TGTT-GAGATTAAA----TA------A----T------
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        2481 20 +     15331 TGCT-GAGATTAAA----CC------A----T---TAG
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       7878 20 +     20762 TGCT-GAGATTAAA----CC------A----T---TAG
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         117876 20 +    130994 TGCT-GAGATTAAA----CC------A----T---TAG
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           36667 20 +     46263 TGCT-GAGATTAAA----CC------A----T---TAG
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     29781 20 +     42640 TGCT-GAGATTAAA----CC------A----T---TAG
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        12825 20 +     30600 TGCT-GAGATTAAA----CC------A----T---TAG
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   99387 20 -    120886 TGTT-GAAATTAGA----TG------A----C---AAA
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 I 9
s Solenodon_paradoxus.SolPar_flattened_line_1012            16993 18 +    739146 TATT-GAGATTTAA----TG------A----T---G--
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17749610 18 -  27805282 TGTT-GATATTCAA----TG------A----T---C--
i Sorex_araneus.JH798170.1                              I 16 I 2
s Spermophilus_dauricus.KZ294190.1                        2238863 15 +   2842873 TAGT-GAAATTAAA----C-------A-----------
i Spermophilus_dauricus.KZ294190.1                      C 0 I 3
s Spilogale_gracilis.SpiGra_flattened_line_905             233401 18 -    276980 TGTT-GAGATTAAA----AG------A----T---T--
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 I 393
s Suricata_suricatta.SurSur_flattened_line_20339            25954 18 +     62062 TGTT-AAAATGAAA----AG------A----T---A--
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 I 630
s Sus_scrofa.CM000824.4                                 189270873 20 + 218635234 TGTT-gggattaaa----ta------a----t-aaa--
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        14039 20 -  13920577 TGTT-GAGATTAAA----TC------A----T---TAG
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               5046 20 -      6213 TGTT-GAGATTAAA----TG------A----TA-AA--
i Tadarida_brasiliensis.TadBra_scaffold_145589          I 45 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               13741 20 +     45698 TATT-GATATTAAA----TG------A----C---AAA
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      805744 18 +   1148477 TGTT-GATATTAAA----TG------A----T---A--
i Tapirus_indicus.TapInd_scaffold_176                   C 0 I 2
s Tapirus_terrestris.TapTer_scaffold_14939                  56401 18 +     99546 TGTT-GATATTAAA----TG------A----T---A--
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 I 2
s Tarsius_lariang.k141_609102                               25563 20 +     42269 TGTT-TAGATTAAA----TG------A----T---AAA
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               58879 20 +     65473 TGTT-TAGATTAAA----TG------A----T---AAA
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194006885 20 - 194193292 TGTT-GAGATTAAA----CC------A----T---TAG
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             38373 20 -     47444 AAAT-TAAATCAAG----TG------A----T---AAA
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  4605 14 +      6782 GGTT-GATATTAAA----T-------------------
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 I 3
s Tonatia_saurophila.TonSau_scaffold_3334                  134889 20 -    259118 TGTT-GAGAGTAAA----TG------A----T-CAA--
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        25988 20 +     38948 TGCT-GAGATTAAA----CC------A----T---TAG
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   19715 20 -     32910 TGCT-GAGATTAAA----CC------A----T---TAG
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      1102 20 -     12939 TGCT-GAGATTAAA----CC------A----T---TAG
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       1037 20 -     14244 TGCT-GAGATTAAA----CC------A----T---TAG
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           42435 20 -     54611 TGCT-GAGATTAAA----CC------A----T---TAG
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                         241 20 -     11566 TGCT-GAGATTAAA----CC------A----T---TAG
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     2413 20 -     15592 TGCT-GAGATTAAA----CC------A----T---TAG
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          1070 20 +     14371 TGCT-GAGATTAAA----CC------A----T---TAG
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  50822 20 +     51589 TGCT-GAGATTAAA----CC------A----T---TAG
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       14003 20 +     14732 TGCT-GAGATTAAA----CC------A----T---TAG
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       4475 20 -     28054 TGCT-GAGATTAAA----CC------A----T---TAG
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44659275 20 -  44834318 TGCT-GAGATTAAA----CC------A----T---TAG
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       1578 20 +     13828 TGCT-GAGATTAAA----CC------A----T---TAG
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   4184 20 +     90398 TGTT-GAGAATAAA----TA------G----TA-AA--
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16081587 13 +  31416278 --------ATTCAA----TA------A----G---AAA
i Trichechus_manatus.JH594618.1                         I 4 C 0
s Tursiops_truncatus.MRVK01000923.1                      69312443 20 -  96451834 TGCT-GAGATTAAG----TA------G----TA-AA--
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_139357                   899 17 +      2103 TGTT-GGAATTGAA----TA------A----T------
i Uropsilus_gracilis.UroGra_scaffold_139357             C 0 C 0
s Ursus_maritimus.KK498671.1                              6513174 18 +  28682327 TGTT-gagattaaa----ag------a----t---a--
i Ursus_maritimus.KK498671.1                            C 0 I 627
s Varecia_rubra.k141_432109                                  4354 20 -     20643 TGTT-GAGATTGAA----CT------A----T---AAA
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             23895 20 -     33872 TGTT-GAGATTGAA----CT------A----T---AAA
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1523681 21 -   2331223 cGTT-GAGATTAAA----CA------G----AATAC--
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                136603 18 -    281493 TGTT-GGGATTGAA----AG------G----T---A--
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 I 548
s Xerus_inauris.XerIna_scaffold_7898                       125967 15 -    134049 TAGT-GAAATTAAA----T-------A-----------
i Xerus_inauris.XerIna_scaffold_7898                    C 0 I 3
s Zalophus_californianus.ZalCal_flattened_line_4097        212673 18 -    227762 TGTT-GAGATTAAA----AG------A----T---A--
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 I 607
s Ziphius_cavirostris.ZipCav_flattened_line_127025           5938 20 -      8775 TGCT-GAGATTAAG----TA------G----TA-AA--
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Dinomys_branickii.DinBra_scaffold_1996                   156356 54 +    228994 I
e Orycteropus_afer.OryAfe_flattened_line_13509              43378 16 -     66828 I
e Microgale_talazaci.MicTal_scaffold_34660                  30638 409 -     48017 I
e Manis_pentadactyla.KN017078.1                             35015 87 +     58827 I
e Manis_javanica.JSZB01003966.1                            144940 87 +    252755 I
e Elephantulus_edwardii.JH947210.1                        7804622 10712 +  15467074 I
e Echinops_telfairi.JH980316.1                           22994192 422 -  44670279 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     14107 296 -     20485 I
e Hylobates_pileatus_a.tarseq_592                             33311  5 -     60944 I
e Tupaia_tana.TupTan_flattened_line_68454                    4094 206 +     13056 I
e Tupaia_chinensis.KB320831.1                             2791839 261 -   3938065 I
e Nomascus_siki_b.tarseq_80                             24175  0 -  18771707 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               11045 26 +    209709 T-T-------G-TCACC-TGTG--A-------------A---------------TC-ATA---A-AG----------------TCTG
s Acinonyx_jubatus.LLWD01000356.1                         2033026 26 +   3721120 T-A-------T-TTACC-TGTG--A-------------A---------------TC-ATA---A-AT----------------TCTG
i Acinonyx_jubatus.LLWD01000356.1                       I 632 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    111704  7 -    189883 ---------------------G--A-------------G---------------TC-CT----------------------------
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 2 I 6
s Ailuropoda_melanoleuca.LNAT01000321.1                  10656343 26 +  23371972 T-T-------A-TCACC-TGTG--A-------------A---------------TC-ATA---A-AT----------------TCTG
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 627 C 0
s Ailurus_fulgens.LNAC01000003.1                          7093491 26 -  16596857 t-c-------a-TCACC-TGTG--A-------------A---------------TC-ATA---A-AT----------------TCTG
i Ailurus_fulgens.LNAC01000003.1                        I 610 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   12061 25 -     22067 T-T-------T-T-ATC-TATG--A-------------A---------------TC-ATC---A-GG----------------TCTG
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                    396 26 -     60446 T-T-------G-TCACC-TGTG--A-------------A---------------TC-ATA---A-AC----------------TCTG
i Allenopithecus_nigroviridis.k141_2469532              I 5 C 0
s Allochrocebus_lhoesti.k141_3566948                         1117 26 -     29318 T-T-------G-TCACC-TGTG--A-------------A---------------TC-GTA---A-AC----------------TCTG
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                           54 26 +     38766 T-T-------G-TCACC-TGTG--A-------------A---------------TC-GTA---A-AC----------------TCTG
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          1011 26 -     80423 T-T-------G-TCACC-TGTG--A-------------A---------------TC-GTA---A-AC----------------TCTG
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             9310 26 -     18050 T-A-------G-TCATC-CGTG--A-------------A---------------AC-ATA---A-AG----------------TCTG
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                 10400 26 -     11521 T-A-------G-TCATC-CGTG--A-------------A---------------AC-ATA---A-AG----------------TCTG
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                              9987 26 -     21359 T-A-------G-TCATC-CGTG--A-------------A---------------AC-ATA---A-AG----------------TCTG
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_298055                                 1283 24 +      1823 T-A-------G-TCATC-CGTG--A-------------A---------------AC---A---A-AG----------------TCTG
i Alouatta_juara.k141_298055                            C 0 C 0
s Alouatta_macconnelli.k141_1331706                          9283 26 -     10438 T-A-------G-TCATC-CGTG--A-------------A---------------AC-ATA---A-AG----------------TCTG
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            5939 26 +      7047 T-A-------G-TCATC-CGTG--A-------------A---------------AC-ATA---A-AG----------------TCTG
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             9219 26 +     10410 T-A-------G-TCATC-CATG--A-------------A---------------AC-ATA---A-AG----------------TCTG
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            3029 24 -      4927 T-A-------G-TCATC-CGTG--A-------------A---------------AC---A---A-AG----------------TCTG
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             5958 24 +      6429 T-A-------G-TCATC-CGTG--A-------------A---------------AC---A---A-AG----------------TCTG
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3519169 26 +   4113121 T-T-------C-TCATG-TATA--A-------------A---------------TC-ATA---A-TG----------------GTTA
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      389339 26 -    631301 T-T-------A-TCATC-TGTG--A-------------A---------------TC-ATA---A-TG----------------TCTG
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            29752 26 +     33004 T-T-------A-TCACT-TATA--A-------------A---------------TA-AAA---A-TG----------------ATTA
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 61669 26 +     78111 T-A-------G-TCATC-TGTG--A-------------A---------------AC-ATA---A-AG----------------TCTG
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            4610 26 +     22701 T-A-------G-TCATC-TGTG--A-------------A---------------AC-ATA---A-AG----------------TCTG
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5748567 26 +   9889416 T-A-------G-TCATC-TGTG--A-------------A---------------AC-GTA---A-AG----------------TCTG
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             5152 26 -    104377 T-A-------G-TCATC-TGTG--A-------------A---------------AC-ATA---A-AG----------------TCTG
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               5158 26 +     23246 T-A-------G-TCATC-TGTG--A-------------A---------------AC-ATA---A-AG----------------TCTG
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     2816 24 +      5067 T-T-------T-TCGTC-TGTG--A-------------A---------------TC-A-----A-AG----------------TATG
i Aplodontia_rufa.AprRuf_scaffold_156013                I 4 C 0
s Arctocebus_calabarensis.k141_587554                         163 29 +      9265 T-T-------G-TCATT-TGTG--A-------------GT---C----A-----TC-ATC---A-AA----------------TCTG
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 7742 26 -     29036 T-T-------A-TCATC-TGTG--A-------------A---------------TC-ACA---G-TG----------------TCTG
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9538415 26 +  39197703 T-A-------G-TCATC-TGTG--A-------------A---------------AC-ATA---A-AG----------------TCTG
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             59686 26 +     85812 T-A-------G-TCATC-TGTG--A-------------A---------------AC-ATA---A-AG----------------TCTG
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                10698 26 +     89302 T-A-------G-TCATC-TGTG--A-------------A---------------AC-ATA---A-AG----------------TCTG
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             15203 26 -     58268 T-A-------G-TCATC-TGTG--A-------------A---------------AC-ATA---A-AG----------------TCTG
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             63194 26 +    119057 T-A-------G-TCATC-TGTG--A-------------A---------------AC-ATA---A-AG----------------TCTG
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               5163 26 -     25888 T-A-------G-TCATC-TGTG--A-------------A---------------AC-ATA---A-AG----------------TCTG
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 5787 41 -     16375 T-T-------G-TCATC-CATG--A-------------GTTGTCTTTTATGTCATC-ATA---A-AA----------------TCTC
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              2107 41 +      2719 T-T-------G-TCATC-CATG--A-------------GTTGTCTTTTATGTCATC-ATA---A-AA----------------TCTC
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26379182 27 +  51448160 T-T-------A-TCATAGCATA--A-------------G---------------TC-ATA---A-TG----------------CTTA
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        4414 26 -     13118 T-T-------A-TCATT-TGTA--A-------------G---------------TC-ATA---A-TG----------------CTTA
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   42232 26 -     72089 T-T-------C-TCATT-TATA--A-------------A---------------TC-ATA---A-TG----------------GTTA
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6558543 26 +   6870073 t-t-------a-tcatt-tata--a-------------a---------------tc-ata---a-tg----------------atta
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138138769 26 - 161108492 t-t-------a-tcatt-tata--a-------------a---------------tc-ata---a-tg----------------atta
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     571221 26 -    998990 t-t-------a-tcatt-tata--a-------------a---------------tc-ata---a-tg----------------atta
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136294502 26 - 158972876 t-t-------a-tcatt-tata--a-------------a---------------tc-ata---a-tg----------------atta
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1230268 26 -   1914593 t-t-------a-tcatt-tata--a-------------a---------------tc-ata---a-tg----------------atta
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               113056 26 -    171031 T-A-------G-TCATC-TGTG--A-------------A---------------AC-ATA---A-AG----------------TCTG
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 12084 26 +    125063 T-A-------G-TCATC-TGTG--A-------------A---------------AC-ATA---A-AG----------------TCTG
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                14129 26 -    216513 T-A-------G-TCATC-TGTG--A-------------A---------------AC-ATA---A-AG----------------TCTG
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        6669 26 -    134917 T-A-------G-TCATC-TGTG--A-------------A---------------AC-ATA---A-AG----------------TCTG
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3218606 13 -   8989139 --------------------------------------A---------------TC-ATA---A-TC----------------TTTG
i Camelus_bactrianus.KN276303.1                         I 11 C 0
s Camelus_dromedarius.KN271192.1                           396311 13 -  15254737 --------------------------------------A---------------TC-ATA---A-TC----------------TTTG
i Camelus_dromedarius.KN271192.1                        I 11 C 0
s Camelus_ferus.KB016973.1                                2972044 13 +   6889770 --------------------------------------A---------------TC-ATA---A-TC----------------TTTG
i Camelus_ferus.KB016973.1                              I 11 C 0
s CanFam4.chr31                                          11518109 23 +  39901454 ------------TCACC-CGTA--A-------------A---------------TC-ATA---A-AG----------------TATG
i CanFam4.chr31                                         I 543 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   13133 23 +     87036 ------------TCACC-CGTA--A-------------A---------------TC-ATA---A-AG----------------TATG
i Canis_lupus_VD.CanFam_VD_scaffold_16982               I 542 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11264773 23 -  35597290 ------------tcacc-cgTA--A-------------A---------------TC-ATA---A-AG----------------TATG
i Canis_lupus_dingo.QKWQ01001993.1                      I 542 C 0
s Canis_lupus_familiaris.chr31                           11087306 23 +  39895921 ------------tcacc-cgTA--A-------------A---------------TC-ATA---A-AG----------------TATG
i Canis_lupus_familiaris.chr31                          I 543 C 0
s Canis_lupus_orion.HG994411.1                           16454325 23 -  44759192 ------------tcacc-cgTA--A-------------A---------------TC-ATA---A-AG----------------TATG
i Canis_lupus_orion.HG994411.1                          I 543 C 0
s Capra_aegagrus.CM003214.1                              21324245 26 + 157394656 t-t-------c-tcatt-tata--a-------------a---------------tc-ata---a-ta----------------gtta
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135705472 26 - 157403528 t-t-------c-tcatt-tata--a-------------a---------------tc-ata---a-ta----------------gtta
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_979108                  1056 26 -      1248 T-T-------G-TCATT-AGTG--A-------------A---------------TC-CTA---A-TG----------------CCTG
i Capromys_pilorides.CapPil_scaffold_979108             C 0 C 0
s Carlito_syrichta.NW_007248099.1                          308099 26 +    345090 T-T-------G-TCATC-TGGG--A-------------G---------------TC-ACA---A-AG----------------TGTG
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               58540 26 +     67245 T-T-------A-TCATC-TGTG--A-------------C---------------TC-ATA---A-TG----------------TATG
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   29749 26 +     33760 T-G-------G-CCAAT-TATG--A-------------A---------------TC-ATA---A-AA----------------TCTG
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   157805 26 -    276539 T-T-------A-CCATT-TGTA--A-------------A---------------CC-ATA---A-CT----------------TTTG
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15785686 26 -  24422027 t-t-------G-TCATT-AGTG--A-------------A---------------TT-ATA---A-Tg----------------tcca
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15797620 26 -  24440124 t-t-------G-TCATT-AGTG--A-------------A---------------TT-ATA---A-Tg----------------tcca
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       175811 26 +    436027 T-T-------G-TCATT-AGTG--A-------------A---------------TT-ATA---A-TG----------------TCCA
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18889899 26 -  29618158 T-A-------G-TCATC-TGTG--A-------------A---------------AC-ATA---A-AG----------------TCTG
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 7443 26 -     26817 T-A-------G-TCATC-TGTG--A-------------A---------------AC-ATA---A-AG----------------TCTG
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                11683 26 +     25043 T-A-------G-TCATC-TGTG--A-------------A---------------AC-ATA---A-AG----------------TCTG
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         7132 26 +     21754 T-T-------G-TCATC-TGGG--A-------------G---------------TC-ACA---A-AG----------------TGTG
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4362908 26 +   7569818 T-G-------A-TCATC-TGTG--A-------------A---------------TC-ATA---A-AT----------------TCTG
i Ceratotherium_simum.JH767818.1                        I 2 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         2660 26 -      9338 T-G-------A-TCATC-TGTG--A-------------A---------------TC-ATA---A-AT----------------TCTG
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    I 2 C 0
s Cercocebus_atys.KQ010443.1                              6554339 26 +   6739814 T-T-------G-TCACC-TGTG--A-------------A---------------TT-GTA---A-AC----------------TCTG
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      25816 26 +     60454 T-T-------G-TCACC-TGTG--A-------------A---------------TT-GTA---A-AC----------------TCTG
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          1021 26 -     21101 T-T-------G-TCACC-TGTG--A-------------A---------------TT-GTA---A-AC----------------TCTG
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         58331 26 -    107033 T-T-------G-TCACC-TGTG--A-------------A---------------TT-GTA---A-AC----------------TCTG
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        1223 26 -     17608 T-T-------G-TCACC-TGTG--A-------------A---------------TC-GTA---A-AC----------------TCTG
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          28718 26 +     30494 T-T-------G-TCACC-TGTG--A-------------A---------------TC-GTA---A-AC----------------TCTG
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          57564 26 -     59240 T-T-------G-TCACC-TGTG--A-------------A---------------TC-GTA---A-AC----------------TCTG
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          1265 26 +     16677 T-T-------G-TCACC-TGTC--A-------------A---------------TC-GTA---A-AC----------------TCTG
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           23423 26 +     35983 T-T-------G-TCACC-TGTG--A-------------A---------------TC-GTA---A-AC----------------TCTG
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11989951 26 +  12117833 T-T-------G-TCACC-TGTG--A-------------A---------------TC-GTA---A-AC----------------TCTG
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46476709 26 +  46592721 T-T-------G-TCACC-TGTG--A-------------A---------------TC-GTA---A-AC----------------TCTG
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      40260 26 -     45581 T-T-------G-TCACC-TGTG--A-------------A---------------TC-GTA---A-AC----------------TCTG
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       1266 26 +     35577 T-T-------G-TCACC-TGTG--A-------------A---------------TC-GTA---A-AC----------------TCTG
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        1042 26 -     25661 T-T-------G-TCACC-TGTG--A-------------A---------------TC-GTA---A-AC----------------TCTG
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        1020 26 -     17744 T-T-------G-TCACC-TGTG--A-------------A---------------TC-GTA---A-AC----------------TCTG
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        20629 33 +     37128 T-TTAATTAAT-TCACC-TGTG--A-------------A---------------TC-GTA---A-AC----------------TCTG
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           1851 26 -      6963 T-T-------A-TCATT-TGTG--C-------------A---------------TC-ATA---A-AG----------------TCTG
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      I 3 C 0
s Cheirogaleus_major.k141_1157592                           58084 41 -     68416 T-T-------G-TCATC-CATG--A-------------GTTGTCTTTTATGTCATC-ATA---A-AG----------------TCTC
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            7127 41 +     13308 T-T-------G-TCATC-CATG--A-------------GTTGTCTTTTATGTCATC-ATA---A-AG----------------TCTC
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             4699 26 -     18223 T-A-------G-TCATC-TGTG--A-------------A---------------AC-ATA---A-AG----------------TCTG
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             21722 26 +     25473 T-A-------G-TCATC-TGTG--A-------------A---------------AC-ATA---A-AG----------------TCTG
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           40757 26 +     57117 T-A-------G-TCATC-TGTG--A-------------A---------------AC-ATA---A-AG----------------TCTG
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          45436 26 +     54541 T-A-------G-TCATC-TGTG--A-------------A---------------AC-ATA---A-AG----------------TCTG
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15960833 26 +  43084221 C-T-------G-TCATC-TGTG--A-------------A---------------TC-ACA---A-TG----------------TCCG
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         70258 26 +    196370 T-A-------G-TCATC-TGTA--A-------------A---------------AC-ATA---A-AG----------------TCTG
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          14438 26 +     40510 T-A-------G-TCATC-TGTA--A-------------A---------------AC-ATA---A-AG----------------TCTG
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15138182 26 -  15256731 T-T-------G-TCACC-TGTG--A-------------A---------------TC-GTA---A-AC----------------TCTG
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      33229 26 -     53260 T-T-------G-TCACC-TGTG--A-------------A---------------TC-GTA---A-AC----------------TCTG
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101143793 26 + 101219884 T-T-------G-TCACC-TGTG--A-------------A---------------TC-GTA---A-AC----------------TCTG
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                15526 25 -     21363 T-T-------C-TCATC-TGCG--C-------------A---------------TC-ATA---A-A-----------------TCTG
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           760834 25 +    964067 T-T-------C-TCATC-TGCG--C-------------A---------------TC-ATA---A-A-----------------TCTG
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10885559 26 +  10971483 T-T-------G-TCACC-TGTG--A-------------A---------------TC-ATA---A-AC----------------TCTG
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147663723 26 + 156195979 T-T-------G-TCACC-TGTG--A-------------A---------------TC-ATA---A-AC----------------TCTG
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            15708 26 +     23629 T-T-------G-TCACC-TGTG--A-------------A---------------TC-ATA---A-AC----------------TCTG
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60611647 26 +  78930452 t-t-------a-tcatc-cGTG--A-------------A---------------TC-ATA---A-AG----------------TCTG
i Condylura_cristata.JH655880.1                         C 0 C 0
s Cricetulus_griseus.LT883672.1                          53028309  6 +  72327488 -----------------------------------------------------------------AG----------------TATG
i Cricetulus_griseus.LT883672.1                         I 9 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         38651 17 -     40477 T-T-------A-TCATC-GGTG--A-------------A---------------TC-A-----------------------------
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 I 6
s Cricetomys_gambianus.CriGam_scaffold_949                 277626  7 -    399297 ---------------------G--A-------------A---------------TC-CT----------------------------
i Cricetomys_gambianus.CriGam_scaffold_949              I 2 I 6
s Crocidura_indochinensis.CroInd_scaffold_38409             18723 26 -     19186 T-T-------G-TTAAC-TTTA--T-------------A---------------AC-ATA---A-AT----------------ACAT
i Crocidura_indochinensis.CroInd_scaffold_38409         I 2 I 176
s Cryptoprocta_ferox.CryFer_flattened_line_19014            51036 26 -     70449 T-T-------C-TCACC-TGTG--A-------------A---------------TC-ATA---A-AT----------------TTTG
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 627 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  207267 24 -    956709 T-T-------G-TCATC-TGTG--A-------------G---------------TC-A-----A-AG----------------TCGA
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 29834 26 -     67205 T-T-------G-TCATT-GATG--A-------------A---------------TC-ATA---A-TG----------------CCTG
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                16842 26 +     26546 T-T-------G-TCATC-AATG--A-------------A---------------TT-ATA---A-TA----------------TCTG
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             57934 26 -    236241 T-T-------G-TCATC-AATG--A-------------A---------------TT-ATA---A-TG----------------TATG
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          182689 26 -   6883506 t-t-------a-ttATT-TGTG--T-------------A---------------TC-ATA---A-AG----------------CCTG
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16843943 41 +  31942871 T-T-------G-TCATC-TGTG--A-------------GTTGTCTTTTATGTCATC-ACA---A-AG----------------TCTG
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80035861 26 -  96802777 T-T-------A-TCATT-TGTA--A-------------G---------------TC-ATA---A-TG----------------CTTA
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18697849 26 -  18957592 T-T-------A-TTATC-TGTG--A-------------A---------------TC-ATA---A-TG----------------TCTG
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 321555 26 +    993696 T-G-------A-TCATC-TGTG--A-------------A---------------TC-ATA---A-AT----------------TCTG
i Dicerorhinus_sumatrensis.PEKH010003161.1              I 2 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   2207 26 +    151128 T-G-------A-TCATC-TGTG--A-------------A---------------TC-ATA---A-AT----------------TCTG
i Diceros_bicornis.DicBicMic_scaffold_9545              I 2 C 0
s Dipodomys_ordii.KN672545.1                              3655237 13 +   4240102 T-G-------A-CCACG-TGTG--A--------------------------------------------------------------
i Dipodomys_ordii.KN672545.1                            C 0 I 6
s Dipodomys_stephensi.DipSte_scaffold_44365                 26870 13 +     28912 T-G-------A-CCATG-TGTG--A--------------------------------------------------------------
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 I 6
s Dolichotis_patagonum.DolPat_scaffold_14102                35181 26 -     73477 T-T-------G-TCATC-AGTG--A-------------A---------------TT-GTA---A-TG----------------TCTG
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Eidolon_helvum.KE772537.1                                 11217 26 +     24177 t-t-------a-tcatT-TGTG--A-------------A---------------TG-ATA---A-TA----------------TCTG
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1490519 27 +   1727528 T-T-------A-TCATTATATC--A-------------A---------------TC-AGA---A-TG----------------ATTA
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        238866  6 -    369425 -----------------------------------------------------------------AG----------------TATG
i Ellobius_lutescens.LOEQ01003611.1                     I 9 C 0
s Ellobius_talpinus.LOJH01090055.1                           5979  6 -      7838 -----------------------------------------------------------------AG----------------TATG
i Ellobius_talpinus.LOJH01090055.1                      I 9 C 0
s Enhydra_lutris.KZ291749.1                              85871198 26 +  99434291 T-T-------A-TCATT-TGTG--A-------------A---------------TC-ATA---A-AT----------------TCTG
i Enhydra_lutris.KZ291749.1                             I 801 C 0
s Eptesicus_fuscus.JH977687.1                             4703235 26 +   6522550 T-T-------A-TCATC-TGTG--A-------------A---------------TT-GTA---A-TG----------------TCTG
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5851972 26 -   7175178 T-G-------A-GCATC-TGTG--A-------------A---------------TC-CTA---A-AT----------------TCTG
i Equus_asinus.JREZ01000062.1                           I 2 C 0
s Equus_caballus.CM000402.2                              13350475 26 +  41866177 T-G-------A-GCATC-TGTG--A-------------A---------------TC-CTA---A-AT----------------TCTG
i Equus_caballus.CM000402.2                             I 2 C 0
s Equus_przewalskii.ATBW01073585.1                          11965 26 +     92910 T-G-------A-GCATC-TGTG--A-------------A---------------TC-CTA---A-AT----------------TCTG
i Equus_przewalskii.ATBW01073585.1                      I 2 C 0
s Erinaceus_europaeus.JH835290.1                         11531521 22 +  16010500 T-T-------A-TTATT-TGTG--A-------------A---------------TC-ATA---A-AT--------------------
i Erinaceus_europaeus.JH835290.1                        I 2 I 8
s Erythrocebus_patas.Contig8                             48770360 26 -  48907691 T-T-------G-TCACC-TGTG--A-------------A---------------TC-GTA---A-AC----------------TCTG
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          314067 26 +    330699 T-T-------A-TCATT-TGTA--A-------------G---------------TC-ATA---A-TG----------------CTTA
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             60521 26 +     89355 T-T-------A-TCATT-TGTA--A-------------G---------------TC-ATA---A-TG----------------CTTA
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              4128 41 +     13586 T-T-------G-TCATC-TGTG--A-------------GTAGTCTTTTATGTCATC-ATA---A-AG----------------TCTC
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               4065 41 -      6809 T-T-------G-TCATC-TGTG--A-------------GTAGTCTTTTATGTCATC-ATA---A-AG----------------TCTC
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            10538 41 +     36558 T-T-------G-TCATC-TGTG--A-------------GTAGTCTTTTATGTCATC-ATA---A-AA----------------TCTC
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             6857 41 +     60246 T-T-------G-TCATC-TGTG--A-------------GTAGTCTTTTATGTCATC-ATA---A-AA----------------TCTC
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                10336 41 +    109717 T-T-------G-TCATC-TGTG--A-------------GTAGTCTTTTATGTCATC-ATA---A-AG----------------TCTC
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               14719 41 +     16540 T-T-------G-TCATC-TCTG--A-------------GTAGTCTTTTATGTCATC-ATA---A-AA----------------TCTC
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                14992 41 +     27497 T-T-------G-TCATC-TGTG--A-------------GTAGTCTTTTATGTCATC-ATA---A-AA----------------TCTC
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           17449 41 +     26808 T-T-------G-TCATC-TGTG--A-------------GTAGTCTTTTATGTCATC-ATA---A-AA----------------TCTC
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                32184 41 +     46535 T-T-------G-TCATC-TGTG--A-------------GTAGTCTTTTATGTCATC-ATA---A-AG----------------TCTC
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              14906 41 -     29447 T-T-------G-TCATC-TGTG--A-------------GTAGTCTTTTATGTCATC-ATA---A-AG----------------TCTC
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129892005 26 - 159252932 T-A-------T-TTACC-TGTG--A-------------A---------------TC-ATA---A-AT----------------TCTG
i Felis_catus.CM001386.2                                I 635 C 0
s Felis_catus_fca126.CM031420.1                         129279074 26 - 158578461 T-A-------T-TTACC-TGTG--A-------------A---------------TC-ATA---A-AT----------------TCTG
i Felis_catus_fca126.CM031420.1                         I 632 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 20219 26 +     52776 T-A-------T-TTACC-TGTG--A-------------A---------------TC-ATA---A-AT----------------TCTG
i Felis_nigripes.FelNig_flattened_line_8080             I 642 C 0
s Galago_moholi.ctg555                                     210063 12 -    847004 ------------------------------------------------------TC-ATC---A-AG----------------TCTG
i Galago_moholi.ctg555                                  I 27 C 0
s Galago_senegalensis.k141_964197                           12442 12 -     43889 ------------------------------------------------------TC-ATC---A-AG----------------TCTG
i Galago_senegalensis.k141_964197                       I 27 C 0
s Galagoides_demidoff.k141_1769638                           9510 12 +     27357 ------------------------------------------------------TC-ATC---A-AG----------------TCTG
i Galagoides_demidoff.k141_1769638                      I 27 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               155355 26 +    324696 T-T-------G-TGATC-TGTG--A-------------A---------------TC-ATA---A-AG----------------TCTG
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    180319 26 -    189561 t-t-------a-tcatt-tata--a-------------a---------------tc-ata---a-tg----------------atta
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           12207 26 -     18683 T-T-------G-TCATC-TGTG--A-------------A---------------TC-ATG---A-AG----------------TCTG
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               4425 26 -     14630 T-T-------G-TCACC-TGTG--A-------------A---------------TC-ATA---A-AG----------------TCTG
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119651524 26 - 195582420 T-T-------G-TCACC-TGTG--A-------------A---------------TC-ATA---A-AG----------------TCTG
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   76700 24 +    118900 T-T-------G-TCATC-TGTG--A-------------G---------------TC-A-----A-AG----------------TCTG
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                          929 41 +     10286 T-T-------G-TCATC-TGTG--A-------------GTAGTCTTTTATGTCATC-ATA---A-AG----------------TCTC
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_1254239                            9105 41 +      9690 T-T-------C-TCATC-TGTG--A-------------GTAGTCTTTTATGTCATC-ATA---A-AG----------------TCTC
i Hapalemur_gilberti.k141_1254239                       C 0 C 0
s Hapalemur_griseus.k141_1387522                             4734 41 +     56096 T-T-------G-TCATC-TGTG--A-------------GTAGTCTTTTATGTCATC-ATA---A-AG----------------TCTC
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        27984 41 -     42470 T-T-------G-TCATC-TGTG--A-------------GTAGTCTTTTATGTCATC-ATA---A-AG----------------TCTC
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        44608 41 -     54384 T-T-------G-TCATC-TGTG--A-------------GTAGTCTTTTATGTCATC-ATA---A-AG----------------TCTC
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              16242 26 +     53719 T-T-------C-TCACC-TGTG--A-------------A---------------TC-ATA---A-AT----------------TTTG
i Helogale_parvula.HelPar_flattened_line_22962          I 626 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                26517 26 -     91191 T-T-------C-TCATT-TATA--A-------------A---------------TC-ATA---A-TG----------------GTTA
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2550166 26 +  31725842 T-T-------C-TCATC-ACTG--A-------------A---------------TC-ATA---A-TG----------------TCTG
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               56609 25 +     73687 T-T-------A-TCATC-CATG--T-------------G---------------TG-AGA---A--C----------------TCTG
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              146142 26 +    277961 T-T-------A-TTATT-TGTA--A-------------A---------------TC-ATG---A-TG----------------CTTA
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      277431 26 -    477199 t-t-------a-ttatc-TGTG--A-------------A---------------TC-ATA---A-TG----------------TCAA
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              6590 26 -      9143 T-T-------A-TTATC-TGTG--A-------------A---------------TG-ATA---C-TA----------------TCAA
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      3831 26 -   7690867 T-T-------A-TCACC-TGTG--A-------------A---------------TC-ATA---A-AG----------------TCTG
i Hoolock_leuconedys.ctg79                                 I 65 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 16327 26 -     67322 T-T-------C-TCACC-TGTG--A-------------A---------------TC-ATA---A-AT----------------TTTG
i Hyaena_hyaena.HyaHya_flattened_line_20729             I 1592 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           18060 26 -    119109 T-T-------A-TTATC-AGTG--A-------------A---------------TT-GTA---A-TG----------------TCTG
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              4257 26 +      5897 T-T-------A-TCACC-TGTG--A-------------A---------------TC-ATA---A-AG----------------TCTG
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_624065                               1121 26 +      2112 T-T-------A-TCACC-TGTG--A-------------A---------------TC-ATA---A-AG----------------TCTG
i Hylobates_agilis.k141_624065                          C 0 C 0
s Hylobates_klossii.k141_466549                             10697 26 +     11537 T-T-------A-TCACC-TGTG--A-------------A---------------TC-ATA---A-AG----------------TCTG
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14623802 26 -  25970782 T-T-------A-TCACC-TGTG--A-------------A---------------TC-ATA---A-AG----------------TCTG
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            1058 26 -      2977 T-T-------A-TCACC-TGTG--A-------------A---------------TC-ATA---A-AG----------------TCTG
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     5236 26 +     22540 T-T-------G-TCATT-GGTG--A-------------A---------------TC-ATA---A-TA----------------CGCA
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7124961 22 +  13083262 T-T-------G-TCACC-T--G--A-------------A---------------TC-A-----A-AG----------------TCTG
i Ictidomys_tridecemlineatus.JH393315.1                 I 3 C 0
s Indri_indri.k141_4418183                                    548 41 -      1457 T-T-------G-TCATC-CATG--A-------------GTTGTCTTTTATGTCATC-ATA---A-AA----------------TCTC
i Indri_indri.k141_4418183                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               8061 26 +     17520 T-T-------A-TCATT-TGTA--A-------------G---------------TC-ATA---A-TG----------------CTTA
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8564792 25 +  11848649 T-T-------G-T-ATC-TATG--A-------------A---------------TC-ATC---A-AG----------------TCTG
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               22681 26 +     37189 T-T-------A-TCATT-TGTA--A-------------G---------------TC-ACA---A-TG----------------CTTA
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          49279 26 -    147782 T-A-------G-TCATC-TGTG--A-------------A---------------AC-ATA---A-AG----------------TCTG
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   113082 26 -    115756 T-T-------A-TCATC-TGTG--A-------------A---------------TT-GTA---A-TG----------------TCTG
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258406289 41 - 285822530 T-T-------C-TCATC-TGTG--A-------------GTAGTCTTTTATGTCATC-ATA---A-AG----------------TCTC
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        23041 41 +     39228 T-T-------G-TCATC-CACG--A-------------GTCGTCTTGTATGTCATC-ATA---A-AG----------------TCTC
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            52416 41 +     63517 T-T-------G-TCATC-CACG--A-------------GTCGTCTTGTATGTCATC-ATA---A-AG----------------TCTC
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        77666 41 +    116806 T-T-------G-TCATC-CACG--A-------------GTTGTCTTGTATCTCATC-ATA---A-AG----------------TCTC
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     30680 41 -     33031 T-T-------G-TCATC-CACG--A-------------GTCGTCTTGTATGTCATC-ATA---A-AG----------------TCTC
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3085003 26 -   3498232 t-t-------a-tCACC-TGTG--G-------------A---------------TC-ATA---A-AT----------------TCTG
i Leptonychotes_weddellii.KB714749.1                    I 594 C 0
s Lepus_americanus.LepAme_scaffold_62849                    12045 26 +     22452 T-T-------G-TCATC-TGAT--A-------------A---------------TC-ATA---A-AT----------------TCTA
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            135014 26 +   3060487 t-t-------a-tcatt-tgta--a-------------g---------------tc-ata---a-tg----------------ctta
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19247428 26 +  19376315 T-T-------G-TCACC-TGTG--A-------------A---------------TT-GTA---A-AC----------------TCTG
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            9800 37 +     84689 T-T-------G-TCATT-TGTG--A-------------GTTGTCTTT-ATG---TC-ATC---A-AG----------------TCTG
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3777549 37 +   6799190 T-T-------G-TCATT-TGTG--A-------------GTTGTCTTT-ATG---TC-ATC---A-AG----------------TCTG
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20591137 25 -  62548349 t-t-------a-tCACC-TGTA--C-------------A---------------TG-AGA---A--C----------------TCTA
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11086762 23 +  39895028 ------------tcacc-cgTA--A-------------A---------------TC-ATA---A-AG----------------TATG
i Lycaon_pictus.CM007556.1                              I 543 C 0
s Macaca_arctoides.k141_2201161                             19168 26 +     74745 T-T-------G-TCACC-TGTG--A-------------A---------------TC-GTA---A-AC----------------TCTG
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12705624 26 +  12821369 T-T-------G-TCACC-TGTG--A-------------A---------------TC-GTA---A-AC----------------TCTG
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                1269 26 -      3136 T-T-------G-TCACC-TGTG--A-------------A---------------TC-GTA---A-AC----------------TCTG
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           46086 26 +     63263 T-T-------G-TCACC-TGTG--A-------------A---------------TC-GTA---A-AC----------------TCTG
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                  789 26 -      2568 T-T-------G-TCACC-TGTG--A-------------A---------------TC-GTA---A-AC----------------TCTG
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 1375 26 -      7381 T-T-------G-TCACC-TGTG--A-------------A---------------TC-GTA---A-AC----------------TCTG
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  44593 26 -     79256 T-T-------G-TCACC-TGTG--A-------------A---------------TC-GTA---A-AC----------------TCTG
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196034701 26 + 196197964 T-T-------G-TCACC-TGTG--A-------------A---------------TC-GTA---A-AC----------------TCTG
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11444868 26 +  11645122 T-T-------G-TCACC-TGTG--A-------------A---------------TC-GTA---A-AC----------------TCTG
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   3540 26 -     46448 T-T-------G-TCACC-TGTG--A-------------A---------------TC-GTA---A-AC----------------TCTG
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                1212 26 -     13212 T-T-------G-TCACC-TGTG--A-------------A---------------TC-GTA---A-AC----------------TCTG
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 14892 26 -     55006 T-T-------G-TCACC-TGTG--A-------------A---------------TC-GTA---A-AC----------------TCTG
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43840010 26 +  43892939 T-T-------G-TCACC-TGTG--A-------------A---------------TC-GTA---A-AC----------------TCTG
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               16179 26 -     24607 T-T-------G-TCACC-TGTG--A-------------A---------------TC-GTA---A-AC----------------TCTG
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               3545 26 -     27140 T-T-------G-CCACC-TGTG--A-------------A---------------TC-GTA---A-AC----------------TCTG
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                700631 26 +    802869 T-T-------A-TTATT-TGTG--A-------------C---------------TC-ATA---A-TA----------------TCTG
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43436587 26 -  43563597 T-T-------G-TCACC-TGTG--A-------------A---------------TT-GTA---A-AC----------------TCTG
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4449413 26 -   4543643 T-T-------G-TCACC-TGTG--A-------------A---------------TT-GTA---A-AC----------------TCTG
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36872800 22 +  64221397 T-T-------G-TCCCA-T--G--A-------------A---------------TC-A-----A-AG----------------TCTG
i Marmota_marmota.CZRN01000005.1                        I 3 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       63437 17 -    234502 T-T-------A-TCATC-TGTG--A-------------A---------------TC-A-----------------------------
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 I 6
s Mellivora_capensis.MelCap_flattened_line_146202            1798 26 -      1999 T-T-------A-TCATC-TGTG--A-------------A---------------TC-ATA---A-AT----------------TCTG
i Mellivora_capensis.MelCap_flattened_line_146202       I 794 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               11807  7 +     15977 ---------------------G--A-------------G---------------TC-CT----------------------------
i Meriones_unguiculatus.MerUng_scaffold_52233           I 2 I 6
s Mesocricetus_auratus.KB708139.1                         1046011  7 -  26018355 ---------------------G--A-------------A---------------TC-CT----------------------------
i Mesocricetus_auratus.KB708139.1                       I 2 I 6
s Microcebus_murinus.CM007691.1                          16509294 41 +  47401472 t-t-------g-tcatC-TATG--A-------------GTTGTCTTTTATGTCATC-GTA---A-AG----------------TCTC
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               21724 26 -     32043 T-G-------A-TCATC-TGTG--A-------------A---------------TC-ATA---A-TG----------------TCTG
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22819159  6 -  98408828 -----------------------------------------------------------------AG----------------TATG
i Microtus_ochrogaster.CM001673.1                       I 9 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8208719 26 +  10048721 T-T-------A-TCATC-TGTA--A-------------A---------------TC-ATA---A-TA----------------TCTG
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            33376 26 +     45743 T-T-------A-TCATC-TGTA--A-------------A---------------TC-GGA---A-TA----------------TCTG
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         1140 26 +     29742 C-T-------G-TCACC-TGTG--A-------------A---------------TC-GTA---A-AC----------------TCTG
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        10516 26 -    104932 T-T-------A-TCACC-TGTG--G-------------A---------------TC-ATA---A-AT----------------TCTG
i Mirounga_angustirostris.MirAng_flattened_line_8852    I 599 C 0
s Mirza_zaza.k141_226143                                     4684 41 +      8497 T-T-------G-TCATC-CATG--A-------------ATTGTCTTTTATGTCATG-GTA---A-AG----------------TCTC
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 145449 26 +    154973 T-T-------A-TCATT-TGTA--A-------------G---------------TC-ATA---A-TG----------------CTTA
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                160235 26 +    265003 T-T-------A-CCATC-TGTG--A-------------G---------------TC-ATA---A-TG----------------CCTG
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 3620 26 -      4346 T-T-------A-TCATT-TATA--A-------------A---------------TC-ATA---A-TG----------------ATTA
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  143938 26 -    168139 T-T-------C-TCACC-TGTG--A-------------A---------------TC-ATA---A-AT----------------TTTG
i Mungos_mungo.MunMun_flattened_line_8729               I 631 C 0
s Murina_feae.MurFea_scaffold_2254                          18595 26 -    100666 T-T-------A-TCATC-TGTA--A-------------A---------------GT-GTA---A-TG----------------TCTG
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70765657  7 +  92629107 ---------------------G--A-------------A---------------TC-CT----------------------------
i Mus_caroli.LT608236.1                                 I 2 I 6
s Mus_musculus.chr16                                     75488695  7 +  98207768 ---------------------G--A-------------A---------------TC-CT----------------------------
i Mus_musculus.chr16                                    I 2 I 6
s Mus_pahari.LT608305.1                                  67554930  7 +  89017189 ---------------------G--A-------------A---------------TC-CT----------------------------
i Mus_pahari.LT608305.1                                 I 2 I 6
s Mus_spretus.CM004110.1                                 74329874  7 +  97876770 ---------------------G--A-------------A---------------TC-CT----------------------------
i Mus_spretus.CM004110.1                                I 2 I 6
s Muscardinus_avellanarius.MusAve_scaffold_9643             10685 26 +     98495 T-T-------G-TTATC-TGTG--G-------------A---------------TC-ATA---G-aa----------------tctg
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4423376 27 -  28371801 TTT-------A-TCATC-TCTG--A-------------A---------------TC-ATA---A-AT----------------TCTG
i Mustela_putorius.JH417978.1                           I 800 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     89117 26 -    117718 T-T-------G-GCATT-AATG--A-------------A---------------TC-ATA---A-TG----------------CCTG
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               966890 26 +   8389877 T-T-------A-TCATC-TGTG--A-------------A---------------TT-GTA---A-TG----------------TCTG
i Myotis_brandtii.KE161952.1                            I 4 C 0
s Myotis_davidii.KB114863.1                               5018566 26 +   6462685 T-T-------A-TCATC-TGTG--A-------------A---------------TT-GTA---A-TA----------------TCTG
i Myotis_davidii.KB114863.1                             I 4 C 0
s Myotis_lucifugus.GL429887.1                             3464470 26 -   3747815 T-T-------A-TCATC-TGTG--A-------------A---------------TT-GTA---A-TG----------------TCTG
i Myotis_lucifugus.GL429887.1                           I 4 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         9685 26 +     66751 T-T-------A-TCATC-TGTG--A-------------A---------------TT-GTA---A-TG----------------TCTG
i Myotis_myotis.MyoMyo_scaffold_6123                    I 4 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             4085 26 -      8794 C-T-------A-TCATC-TATG--T-------------G---------------TC-ATA---A-AG----------------TCTG
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            117480 16 +    362372 ----------G-TCACC-TATG--A-------------A---------------TC-AT----------------------------
i Nannospalax_galili.KL201303.1                         I 1 I 6
s Nasalis_larvatus.k141_153429                               7642 26 +     48152 T-T-------G-TCACC-TGTG--A-------------A---------------TC-ATA---A-AC----------------TCTG
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4483908 26 -  14209539 t-t-------a-tCACC-TGTG--G-------------A---------------TC-ATA---A-AT----------------TCTG
i Neomonachus_schauinslandi.NINY01007774.1              I 600 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3950063 26 -   4490290 T-T-------A-TCATT-TGTA--A-------------G---------------TC-ATA---A-TG----------------CTTA
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  48339 26 +     94413 T-T-------A-TAATC-TATG--A-------------A---------------TC-ATA---A-TG----------------TCTG
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1439838                           1999 26 +      3718 T-T-------A-TCACC-TGTG--A-------------A---------------TC-ATA---A-AG----------------TCTG
i Nomascus_annamensis.k141_1439838                      I 20 I 111
s Nomascus_concolor.k141_226614                               359 26 -      5092 T-T-------A-TCACC-TGTG--A-------------A---------------TC-ATA---A-AG----------------TCTG
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_642452                            1142 26 +      2851 T-T-------A-TCACC-TGTG--A-------------A---------------TC-ATA---A-AG----------------TCTG
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_a.k141_595747                                  1780 26 +      4512 T-T-------A-TCACC-TGTG--A-------------A---------------TC-ATA---A-AG----------------TCTG
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                29790 23 +   3668941 ------------tcacC-CGTG--A-------------A---------------TC-ATA---A-AG----------------TCTG
i Nyctereutes_procyonoides.CAJHUB010000786.1            I 542 C 0
s Nycticebus_bengalensis.LG16                            65566234 37 -  95554990 T-T-------G-TCATT-TGTA--A-------------GCTGTCTTT-ATG---TC-ATC---A-AG----------------TCTG
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            2963 37 +      6470 T-T-------G-TCATT-TGTA--A-------------GCTGTCTTT-ATG---TC-ATC---A-AG----------------TCTG
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65668572 37 +  89412551 T-T-------G-TCATT-TGTG--A-------------GCTGTCTTT-ATG---TC-ATC---A-AG----------------TCTG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4995132 21 -  23139505 --------------ATC-TGTT--A-------------A---------------TT-ATA---A-AT----------------TCTG
i Ochotona_princeps.JH802095.1                          I 2 C 0
s Octodon_degus.JH651621.1                                3684659 25 +  10294119 t-t-------g-taatt-aatg--a-------------a---------------tc-at----a-TG----------------CCTG
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             678572 26 -   3126709 t-t-------a-tCACC-TGTG--A-------------A---------------TC-ATA---A-AT----------------TCTG
i Odobenus_rosmarus.KB229369.1                          I 616 C 0
s Odocoileus_virginianus.KZ101650.1                       1078750 27 +   1425656 T-T-------A-TCATTATATC--A-------------A---------------TC-ATA---A-TG----------------ATTA
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         36045 26 +     78940 T-T-------A-TCATT-TACA--A-------------A---------------TC-ATA---A-TG----------------ATTA
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  124416  6 +    145789 -----------------------------------------------------------------AG----------------TATG
i Ondatra_zibethicus.OndZib_scaffold_6821               I 9 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  36210  7 +     62360 ---------------------G--A-------------A---------------TC-CT----------------------------
i Onychomys_torridus.OnyTor_scaffold_12578              I 2 I 6
s Orcinus_orca.KB316965.1                                 7223746 26 -   7562323 T-T-------A-TCATT-TGTA--A-------------G---------------TC-ATA---A-TG----------------CTTA
i Orcinus_orca.KB316965.1                               C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141875064 26 + 163896628 t-t-------g-tCACC-TGAT--A-------------A---------------TC-ATC---A-AT----------------TCTA
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      307072 23 -    505867 ------------tcaca-CGTG--A-------------A---------------TC-ATA---A-AG----------------TCTG
i Otocyon_megalotis.JAEUCK010005121.1                   I 536 C 0
s Otolemur_crassicaudatus.k141_321880                       38159 12 +     38679 ------------------------------------------------------TC-ATC---A-AG----------------TCTG
i Otolemur_crassicaudatus.k141_321880                   I 27 C 0
s Otolemur_garnettii.GL873528.1                          18007587 12 -  38779656 ------------------------------------------------------TC-ATC---A-AG----------------TCTG
i Otolemur_garnettii.GL873528.1                         I 27 C 0
s Ovis_aries.CM001582.2                                 134076311 26 - 275406953 T-T-------C-TCATT-TATA--A-------------A---------------TC-ATA---A-TG----------------GTTA
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      77525 26 +    140051 T-T-------C-TCATT-TATA--A-------------A---------------TC-ATA---A-TG----------------GTTA
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127573785 26 - 205426864 T-T-------G-TCACC-TGTG--A-------------A---------------TC-ATA---A-AG----------------TCTG
i Pan_paniscus.CM003386.1                               I 65 C 0
s Pan_troglodytes.CM009241.2                            120150938 26 - 196562556 T-T-------G-TCACC-TGTG--A-------------A---------------TC-ATA---A-AG----------------TCTG
i Pan_troglodytes.CM009241.2                            I 65 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  33383 26 +    295523 T-A-------T-TTACC-TGTG--A-------------A---------------TC-ATA---A-AT----------------TCTG
i Panthera_onca.PanOnc_flattened_line_1615              I 612 C 0
s Panthera_pardus.KV860323.1                              3637119 26 +  18214204 T-A-------T-TTACC-TGTG--A-------------A---------------TC-ATA---A-AT----------------TCTG
i Panthera_pardus.KV860323.1                            I 614 C 0
s Panthera_tigris.KE721879.1                              5026778 26 -   6340057 T-A-------T-TTACC-TGTG--A-------------A---------------TC-ATA---A-AT----------------TCTG
i Panthera_tigris.KE721879.1                            I 626 C 0
s Pantholops_hodgsonii.KE114631.1                         1065172 26 -   1292953 T-T-------C-TCATT-TATA--A-------------A---------------GC-ATA---A-TG----------------GTTA
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188155378 26 - 188283584 T-T-------G-TCACC-TGTG--A-------------A---------------TT-GTA---A-AC----------------TCTG
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             3695 26 +      5367 T-T-------G-TCACC-TGTG--A-------------A---------------TT-GTA---A-AC----------------TCTG
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47512766 26 +  47705337 T-T-------G-TCACC-TGTG--A-------------A---------------TT-GTA---A-AC----------------TCTG
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 66744 26 -    104429 T-T-------G-TCACC-TGTG--A-------------A---------------TT-GTA---A-AC----------------TCTG
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    5276 26 +     14967 T-T-------G-TCACC-TGTG--A-------------A---------------TT-GTA---A-AC----------------TCTG
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 1137 26 -      7628 T-T-------G-TCACC-TGTG--A-------------A---------------TT-GTA---A-AC----------------TCTG
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    114811 26 -    135482 T-T-------A-TCACC-TGTG--A-------------A---------------TC-ATA---A-AT----------------TCTA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 I 723 C 0
s Perodicticus_ibeanus.k141_117958                           4546 40 -     23713 T-T-------G-TCATT-TGTG--A-------------GTTGTCTTT-ATG---TC-ATCATCA-AA----------------TCTG
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            23855 40 -     27972 T-T-------G-TTATT-TGTG--A-------------GTTGTCTTT-ATG---TC-ATCATCA-AA----------------TCTG
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      42707 26 -     45160 T-G-------G-CCACT-TGTG--A-------------A---------------TG-ATC---A-AG----------------CCTG
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4949442  7 -   8017169 ---------------------G--A-------------A---------------TC-CT----------------------------
i Peromyscus_maniculatus.KI615518.1                     I 2 I 6
s Petromus_typicus.PetTyp_scaffold_33007                    11595 26 -     36578 T-T-------G-TCATC-ATTG--A-------------A---------------TT-AAT---A-TA----------------TCCA
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            120363 26 -    122454 T-T-------A-TCATT-TGTA--A-------------G---------------TC-ATA---A-TG----------------CTTA
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1987485                           1164 26 -      5908 T-T-------G-TCACC-TGTG--A-------------A---------------TC-ATA---A-AC----------------TCTG
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       1784 26 -     17985 T-T-------G-TCACC-TGTG--A-------------A---------------TC-ATA---A-AC----------------TCTG
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            1151 26 +      7694 T-T-------G-TCACC-TGTG--A-------------A---------------TC-ATA---A-AC----------------TCTG
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26739629 26 +  26888534 T-T-------G-TCACC-TGTG--A-------------A---------------TC-ATA---A-AC----------------TCTG
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            96522 39 +    112873 T-T-------A-TCATC-TGTG--AATAACAATTCAGAA---------------TT-GTA---A-TG----------------TCTG
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             42761 26 -     61926 T-A-------G-TCATC-TGTG--A-------------A---------------AC-ATA---C-AG----------------TCTG
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        24192 26 +     78826 T-A-------G-TCATC-TGTG--A-------------A---------------AC-ATA---C-AG----------------TCTG
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              8141 26 -     15800 T-A-------G-TCATC-TGTG--A-------------A---------------AC-ATA---C-AG----------------TCTG
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        11339 26 -     16101 T-A-------G-TCATC-TGTG--A-------------A---------------AC-ATA---C-AG----------------TCTG
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          4648 26 +      9673 T-A-------G-TCATC-TGTG--A-------------A---------------AC-ATA---C-AG----------------TCTG
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13473644 26 -  19735023 T-A-------G-TCATC-TGTG--A-------------A---------------AC-GTA---C-AG----------------TCTG
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           12550 26 -     31692 T-A-------G-TCATC-TGTG--A-------------A---------------AC-ATA---C-AG----------------TCTG
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           4431 26 +     21690 T-T-------A-TCGTT-TGTA--A-------------G---------------TC-ATA---A-TG----------------CTTA
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       21985 26 +     44506 T-A-------G-TCATC-TGTG--A-------------A---------------AC-ATA---A-AG----------------TCTG
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        22197 26 +     67491 T-A-------G-TCATC-TGTG--A-------------A---------------AC-ATA---A-AG----------------TCTG
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      12436 26 -     98129 T-A-------G-TCATC-TGTG--A-------------A---------------AC-ATA---A-AG----------------TCTG
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     22036 26 +    147771 T-A-------G-TCATC-TGTG--A-------------A---------------AC-ATA---A-AG----------------TCTG
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        22291 26 -     23762 T-A-------G-TCATC-TGTG--A-------------A---------------AC-ATA---A-AG----------------TCTG
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          2757 26 -     55515 T-A-------G-TCATC-TGTG--A-------------A---------------AC-ATA---A-AG----------------TCTG
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         22110 26 +    152463 T-A-------G-TCATC-TGTG--A-------------A---------------AC-ATA---A-AG----------------TCTG
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      8870 26 +      8943 T-A-------G-TCATC-TGTG--A-------------A---------------AC-ATA---A-AG----------------TCTG
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                         11832 26 +    134592 T-A-------G-TCATC-TGTG--A-------------A---------------AC-ATA---A-AG----------------TCTG
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          22420 26 -     75465 T-A-------G-TCATC-TGTG--A-------------A---------------AC-ATA---A-AG----------------TCTG
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              186310 26 -    373494 T-C-------G-TCACC-TGTG--A-------------A---------------TC-ATA---A-AG----------------TCTG
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19806958 26 +  19899266 T-T-------G-TCACC-TGTG--A-------------A---------------TC-ATA---A-AG----------------TCTG
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               4886 26 -     15069 T-T-------G-TCACC-TGTG--A-------------A---------------TC-ATA---A-AC----------------TCTG
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              5020 26 +     14865 T-T-------G-TCACC-TGTG--A-------------A---------------TC-ATA---A-AC----------------TCTG
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                76473 25 +     78963 T-T-------A-TCATC-CGTG--T-------------G---------------TG-AGA---A--C----------------TCTG
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6847670 41 +  12164890 T-T-------G-TCATC-TGTG--A-------------GTAGTCTTTTATGTCATC-ATA---A-AG----------------TCTC
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    666889 41 -   2312742 t-t-------g-tcaTC-CATG--A-------------GTTGTCTTTTACGTCATC-ATA---A-AA----------------TCTC
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         2716 41 +     11805 T-T-------G-TCATC-CATG--A-------------GTTGTCTTTTATGTCATC-ATA---A-AA----------------TCTC
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           42052 41 +     52369 T-T-------G-TCATC-CATG--A-------------GTTGTCTTTTATATCATC-ATA---A-AA----------------TCTC
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         34442 41 -     44753 T-T-------G-TCATC-CATG--A-------------GTTGTCTTTTATATCATC-ATA---A-AA----------------TCTC
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            16362 41 +     27322 T-T-------G-TCATC-CATG--A-------------GTTGTCTTTTATATCATC-ATA---A-AA----------------TCTC
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       15998 41 -     53241 T-T-------G-TCATC-CATG--A-------------GTTGTCTTTTACGTCATC-ATA---A-AA----------------TCTC
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         38270 41 -     48185 T-T-------G-TCATC-CATG--A-------------GTTGTCTTTTACGTCATC-ATA---A-AA----------------TCTC
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           33343  6 +     77221 ------------------------A-------------G---------------TC-CT----------------------------
i Psammomys_obesus.NESX01026517.1                       I 2 I 6
s Pteronotus_parnellii.KE867983.1                            2903 26 -     27784 T-G-------A-TCGCC-TGTG--A-------------G---------------TC-ATA---A-TG----------------TCTG
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        245686 26 -    344369 T-T-------A-TCATC-TGTG--A-------------A---------------TC-ATA---A-AT----------------TCTG
i Pteronura_brasiliensis.PteBra_flattened_line_1343     I 805 C 0
s Pteropus_alecto.KB031157.1                             13245018 26 -  17261082 T-T-------A-TCATT-TGTG--A-------------A---------------TC-AAA---A-TA----------------TCTG
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             602968 26 -   3946241 T-T-------A-TCATT-TGTG--A-------------A---------------TC-AAA---A-TA----------------TCTG
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131533363 26 - 161321710 T-A-------T-TTACC-TGTG--A-------------A---------------TC-ATA---A-AT----------------TCTG
i Puma_concolor.QAVW01000427.1                          I 628 C 0
s Pygathrix_cinerea.k141_374971                             29004 26 +     56732 T-T-------G-TCACC-TGTG--A-------------A---------------TC-ATA---A-AC----------------TCTG
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6805495 26 +   6970761 T-T-------G-TCACC-TGTG--A-------------A---------------TC-ATA---A-AC----------------TCTG
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             4889 26 +     18040 T-T-------G-TCACC-TGTG--A-------------A---------------TC-ATA---A-AC----------------TCTG
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                14827 27 +     68503 T-T-------A-TCATTATATC--A-------------A---------------TC-ATA---A-TA----------------ATTA
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13914629  7 +  90463843 ---------------------G--A-------------A---------------TC-CT----------------------------
i Rattus_norvegicus.chr11                               I 2 I 6
s Rhinolophus_sinicus.LVEH01000179.1                      1786833 26 +   2252614 T-T-------A-TTACC-TGTG--A-------------A---------------TC-ATA---A-TG----------------TCAA
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_1391695                           1117 26 -      1866 T-T-------G-TCACC-TGTG--A-------------A---------------TC-ATA---A-AC----------------TCTG
i Rhinopithecus_bieti.k119_1391695                      C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206376774 26 - 206558726 T-T-------G-TCACC-TGTG--A-------------A---------------TC-ACA---A-AC----------------TCTG
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44855674 26 -  45163003 T-T-------G-TCACC-TGTG--A-------------A---------------TC-ATA---A-AC----------------TCTG
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                18308 26 +    109198 T-A-------A-TCATT-TGTG--A-------------A---------------TC-ATA---A-TA----------------TCTG
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       6628 26 +     12214 T-T-------A-TCATT-TATA--A-------------A---------------TC-ATA---A-TG----------------GTTA
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15671848 26 -  43202129 T-A-------G-TCGTC-TGTG--A-------------A---------------AC-GTA---A-AG----------------TCTG
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        3765 26 +     34089 T-A-------G-TCATC-TGTG--A-------------A---------------AC-GTA---A-AG----------------TCTG
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              3706 26 -     60842 T-A-------G-TCATC-TGTG--A-------------A---------------AC-GTA---A-AG----------------TCTG
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              3801 26 +     67014 T-A-------G-TCATC-TGTG--A-------------A---------------AC-GTA---A-AG----------------TCTG
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              3779 26 +     60816 T-A-------G-TCATC-TGTG--A-------------A---------------AC-GTA---A-AG----------------TCTG
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 3716 26 -     76454 T-A-------G-TCATC-TGTG--A-------------A---------------AC-GTA---A-AG----------------TCTG
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17340442 26 -  30362882 T-A-------G-TCATC-TGTG--A-------------A---------------AC-ATA---A-AG----------------TCTG
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         19801 26 -     62485 T-A-------G-TCATC-TGTG--A-------------A---------------AC-ATA---A-AG----------------TCTG
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   30390 26 -    114521 T-T-------A-TCATC-TGTG--A-------------A---------------TC-ATA---A-AG----------------TCTG
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        2501 26 +     15331 T-T-------G-CCACC-TGTG--A-------------A---------------TC-ATA---A-AC----------------TCTG
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       7898 26 +     20762 T-T-------G-CCACC-TGTG--A-------------A---------------TC-ATA---A-AC----------------TCTG
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         117896 26 +    130994 T-T-------G-CCACC-TGTG--A-------------A---------------TC-ATA---A-AC----------------TCTG
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           36687 26 +     46263 T-T-------G-CCACC-TGTG--A-------------A---------------TC-ATA---A-AC----------------TCTG
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     29801 26 +     42640 T-T-------G-CCACC-TGTG--A-------------A---------------TC-ATA---A-AC----------------TCTG
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        12845 26 +     30600 T-T-------G-CCACC-TGTG--A-------------A---------------TC-ATA---A-TC----------------TCTG
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   99416  6 -    120886 -----------------------------------------------------------------AG----------------TATG
i Sigmodon_hispidus.SigHis_scaffold_11332               I 9 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            17011 24 +    739146 ----------A-TTGTC-TGTG--A-------------A---------------TC-ATC---A-AC----------------TCTG
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17749630 26 -  27805282 T-T-------G-TTATC-TGTG--A-------------A---------------AC-ATA---A-AT----------------CCTT
i Sorex_araneus.JH798170.1                              I 2 I 1050
s Spermophilus_dauricus.KZ294190.1                        2238881 22 +   2842873 T-T-------G-TCACA-T--G--A-------------A---------------TC-A-----A-AG----------------TCTG
i Spermophilus_dauricus.KZ294190.1                      I 3 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             233812 26 -    276980 T-T-------A-TCACC-CGTG--A-------------A---------------TC-ATA---A-AG----------------TCTG
i Spilogale_gracilis.SpiGra_flattened_line_905          I 393 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            26602 26 +     62062 T-T-------C-TCACC-TGTG--A-------------A---------------TC-ATA---A-AT----------------TTTG
i Suricata_suricatta.SurSur_flattened_line_20339        I 630 C 0
s Sus_scrofa.CM000824.4                                 189270893 26 + 218635234 t-t-------a-ccaTT-TGTA--A-------------G---------------CC-ATA---A-TG----------------TTCA
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        14059 26 -  13920577 T-T-------A-TCACC-TGTG--A-------------A---------------TC-ATA---A-AG----------------TCTG
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               5066 14 -      6213 T-T-------A-TCAC---GTG--A-------------A---------------TC-------------------------------
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 I 7
s Tamandua_tetradactyla.TamTet_scaffold_26877               13761 26 +     45698 C-T-------A-TCATC-TATG--T-------------G---------------TC-ATA---A-AG----------------TCTG
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      805764 26 +   1148477 T-G-------A-TCATC-TGTG--A-------------A---------------TC-ATA---A-AT----------------TCTG
i Tapirus_indicus.TapInd_scaffold_176                   I 2 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  56421 26 +     99546 T-G-------A-TCATC-TGTG--A-------------A---------------TC-ATA---A-AT----------------TCTG
i Tapirus_terrestris.TapTer_scaffold_14939              I 2 C 0
s Tarsius_lariang.k141_609102                               25583 26 +     42269 T-T-------G-TCATC-TAGG--A-------------G---------------TC-ACA---A-AA----------------TGTG
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               58899 26 +     65473 T-T-------G-TCATC-TAGG--A-------------G---------------TC-ACA---A-AA----------------TGTG
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194006905 26 - 194193292 T-T-------G-TCACC-TGTG--A-------------A---------------TT-GTA---A-AC----------------TCTG
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             38393 42 -     47444 T-T-------G-ATTTC-ATTG--A-------------A---------------GC-AAT---A-TGCAAATATTGAACCAGTTGTA
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  4622 26 +      6782 T-T-------A-CCATT-TGTG--C-------------A---------------TC-ATA---A-AG----------------TCTG
i Tolypeutes_matacus.TolMat_scaffold_269431             I 3 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  134909 26 -    259118 T-T-------A-TCATC-TGTG--A-------------A---------------TC-ATA---A-TG----------------TCTG
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        26008 26 +     38948 T-T-------G-CCACC-TGTG--A-------------A---------------TC-ATA---A-AC----------------TCTG
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   19735 26 -     32910 T-T-------G-CCACC-TGTG--A-------------A---------------TC-ATA---A-AC----------------TCTG
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      1122 26 -     12939 T-T-------G-CCACC-TGTG--A-------------A---------------TC-ATA---A-AC----------------TCTG
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       1057 26 -     14244 T-T-------G-CCACC-TGTG--A-------------A---------------TC-ATA---A-AC----------------TCTG
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           42455 26 -     54611 T-T-------G-CCACC-TGTG--A-------------A---------------TC-ATA---A-AC----------------TCTG
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                         261 26 -     11566 T-T-------G-CCACC-TGTG--A-------------A---------------TC-ATA---A-AC----------------TCTG
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     2433 26 -     15592 T-T-------G-CCACC-TGTG--A-------------A---------------TC-ATA---A-AC----------------TCTG
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          1090 26 +     14371 T-T-------G-CCACC-TGTG--A-------------A---------------TC-ATA---A-AC----------------TCTG
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  50842 26 +     51589 T-T-------G-CCACC-TGTG--A-------------A---------------TC-ATA---A-AC----------------TCTG
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       14023 26 +     14732 T-T-------G-CCACC-TGTG--A-------------A---------------TC-ATA---A-AC----------------TCTG
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       4495 26 -     28054 T-T-------G-CCACC-TGTG--A-------------A---------------TC-ATA---A-AC----------------TCTG
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44659295 26 -  44834318 T-T-------G-CCACC-TGTG--A-------------A---------------TC-ATA---A-AC----------------TCTG
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       1598 26 +     13828 T-T-------G-CCACC-TGTG--A-------------A---------------TC-ATA---A-AC----------------GCTG
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   4204 27 +     90398 --T-------A-GTATT-TGTC--A-------------A---------------TTTGTA---AATG----------------CTTA
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16081600 25 +  31416278 T-T-------A-TCACC-TGTG--C-------------A---------------TG-AGA---A--C----------------TCTG
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69312463 26 -  96451834 T-T-------A-GCATT-TGTA--A-------------G---------------TC-ATA---A-TG----------------CTTA
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_139357                   916 26 +      2103 T-T-------A-TTATC-CATT--A-------------A---------------TA-ATA---A-AA----------------TCTG
i Uropsilus_gracilis.UroGra_scaffold_139357             C 0 C 0
s Ursus_maritimus.KK498671.1                              6513819 26 +  28682327 t-t-------A-TCACC-TGTG--A-------------A---------------TC-ATA---A-AT----------------TCTG
i Ursus_maritimus.KK498671.1                            I 627 C 0
s Varecia_rubra.k141_432109                                  4374 41 -     20643 T-T-------G-TGATC-TGTG--A-------------GTAGTCTTTTATGTCATC-ATA---A-AG----------------TCTC
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             23915 41 -     33872 T-T-------G-TGATC-TGTG--A-------------GTAGTCTTTTATGTCATC-ATA---A-AG----------------TCTC
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1523702 26 -   2331223 T-T-------A-TCATT-TGTA--A-------------A---------------TC-ATA---A-TC----------------TTTG
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                137169 23 -    281493 ------------TCACC-CGTG--A-------------A---------------TC-ATA---A-AG----------------TCTG
i Vulpes_lagopus.VulLag_flattened_line_2045             I 548 C 0
s Xerus_inauris.XerIna_scaffold_7898                       125985 22 -    134049 T-T-------G-TCATC-T--G--C-------------A---------------TC-A-----A-AG----------------TCTG
i Xerus_inauris.XerIna_scaffold_7898                    I 3 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        213298 26 -    227762 T-T-------A-TCACC-TGTG--A-------------A---------------TC-ATA---A-AT----------------TCTG
i Zalophus_californianus.ZalCal_flattened_line_4097     I 607 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           5958 26 -      8775 T-T-------A-TCATT-TGTA--A-------------A---------------TC-ATA---A-TG----------------CTTA
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Dinomys_branickii.DinBra_scaffold_1996                   156356 54 +    228994 I
e Orycteropus_afer.OryAfe_flattened_line_13509              43378 16 -     66828 I
e Microgale_talazaci.MicTal_scaffold_34660                  30638 409 -     48017 I
e Manis_pentadactyla.KN017078.1                             35015 87 +     58827 I
e Manis_javanica.JSZB01003966.1                            144940 87 +    252755 I
e Elephantulus_edwardii.JH947210.1                        7804622 10712 +  15467074 I
e Echinops_telfairi.JH980316.1                           22994192 422 -  44670279 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     14107 296 -     20485 I
e Hylobates_pileatus_a.tarseq_592                             33311  5 -     60944 I
e Tupaia_tana.TupTan_flattened_line_68454                    4094 206 +     13056 I
e Tupaia_chinensis.KB320831.1                             2791839 261 -   3938065 I
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I
e Nomascus_siki_b.tarseq_80                             24175  0 -  18771707 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               11071 2 +    209709 AA
s Acinonyx_jubatus.LLWD01000356.1                         2033052 2 +   3721120 AA
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    111717 2 -    189883 AA
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 6 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10656369 2 +  23371972 AA
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7093517 2 -  16596857 AA
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   12086 2 -     22067 AA
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                    422 2 -     60446 AA
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         1143 2 -     29318 AA
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                           80 2 +     38766 AA
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          1037 2 -     80423 AA
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             9336 2 -     18050 AA
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                 10426 2 -     11521 AA
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                             10013 2 -     21359 AA
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_298055                                 1307 2 +      1823 AA
i Alouatta_juara.k141_298055                            C 0 C 0
s Alouatta_macconnelli.k141_1331706                          9309 2 -     10438 AA
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            5965 2 +      7047 AA
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             9245 2 +     10410 AA
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            3053 2 -      4927 AA
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             5982 2 +      6429 AA
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3519195 2 +   4113121 AA
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      389365 2 -    631301 AT
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            29778 2 +     33004 AA
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 61695 2 +     78111 AA
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            4636 2 +     22701 AA
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5748593 2 +   9889416 AA
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             5178 2 -    104377 AA
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               5184 2 +     23246 AA
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     2840 2 +      5067 AA
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_587554                         192 2 +      9265 AA
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 7768 2 -     29036 AA
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9538441 2 +  39197703 AA
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             59712 2 +     85812 AG
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                10724 2 +     89302 AA
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             15229 2 -     58268 AA
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             63220 2 +    119057 AA
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               5189 2 -     25888 AA
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 5828 2 -     16375 AA
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              2148 2 +      2719 AA
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26379209 2 +  51448160 AA
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        4440 2 -     13118 AA
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   42258 2 -     72089 AA
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6558569 2 +   6870073 aa
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138138795 2 - 161108492 aA
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     571247 2 -    998990 aA
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136294528 2 - 158972876 aA
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1230294 2 -   1914593 aA
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               113082 2 -    171031 AA
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 12110 2 +    125063 AA
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                14155 2 -    216513 AA
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        6695 2 -    134917 AA
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3218619 2 -   8989139 AA
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           396324 2 -  15254737 AA
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2972057 2 +   6889770 AA
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11518132 2 +  39901454 AA
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   13156 2 +     87036 AA
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11264796 2 -  35597290 AA
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11087329 2 +  39895921 AA
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16454348 2 -  44759192 AA
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21324271 2 + 157394656 aa
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135705498 2 - 157403528 aa
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_979108                  1082 2 -      1248 AA
i Capromys_pilorides.CapPil_scaffold_979108             C 0 C 0
s Carlito_syrichta.NW_007248099.1                          308125 2 +    345090 AA
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               58566 2 +     67245 AA
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   29775 2 +     33760 AA
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   157831 2 -    276539 AA
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15785712 2 -  24422027 aa
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15797646 2 -  24440124 aa
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       175837 2 +    436027 AA
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18889925 2 -  29618158 AA
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 7469 2 -     26817 AA
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                11709 2 +     25043 AA
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         7158 2 +     21754 AA
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4362934 2 +   7569818 AA
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         2686 2 -      9338 AA
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6554365 2 +   6739814 AA
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      25842 2 +     60454 AA
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          1047 2 -     21101 AA
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         58357 2 -    107033 AA
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        1249 2 -     17608 AA
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          28744 2 +     30494 AA
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          57590 2 -     59240 AA
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          1291 2 +     16677 AA
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           23449 2 +     35983 AA
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11989977 2 +  12117833 AA
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46476735 2 +  46592721 AA
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      40286 2 -     45581 AA
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       1292 2 +     35577 AA
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        1068 2 -     25661 AA
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        1046 2 -     17744 AA
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        20662 2 +     37128 AA
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           1877 2 -      6963 AA
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           58125 2 -     68416 AA
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            7168 2 +     13308 AA
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             4725 2 -     18223 AA
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             21748 2 +     25473 AA
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           40783 2 +     57117 AA
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          45462 2 +     54541 AA
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15960859 2 +  43084221 AA
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         70284 2 +    196370 AA
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          14464 2 +     40510 AA
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15138208 2 -  15256731 AA
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      33255 2 -     53260 AA
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101143819 2 + 101219884 AA
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                15551 2 -     21363 AA
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           760859 2 +    964067 AA
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10885585 2 +  10971483 AA
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147663749 2 + 156195979 AA
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            15734 2 +     23629 AA
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60611673 2 +  78930452 GA
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         38674 2 -     40477 AG
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     I 6 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 277639 2 -    399297 AA
i Cricetomys_gambianus.CriGam_scaffold_949              I 6 C 0
s Cricetulus_griseus.LT883672.1                          53028315 2 +  72327488 AA
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             18925 2 -     19186 AT
i Crocidura_indochinensis.CroInd_scaffold_38409         I 176 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            51062 2 -     70449 AA
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  207291 2 -    956709 AA
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 29860 2 -     67205 AA
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                16868 2 +     26546 AA
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             57960 2 -    236241 AA
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          182715 2 -   6883506 AA
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16843984 2 +  31942871 AA
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80035887 2 -  96802777 AA
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18697875 2 -  18957592 AA
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 321581 2 +    993696 AA
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   2233 2 +    151128 AA
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dipodomys_ordii.KN672545.1                              3655256 2 +   4240102 TA
i Dipodomys_ordii.KN672545.1                            I 6 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 26889 2 +     28912 TA
i Dipodomys_stephensi.DipSte_scaffold_44365             I 6 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                35207 2 -     73477 AA
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Eidolon_helvum.KE772537.1                                 11243 2 +     24177 AA
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1490546 2 +   1727528 AA
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        238872 2 -    369425 AA
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           5985 2 -      7838 AA
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85871224 2 +  99434291 AA
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4703261 2 +   6522550 AA
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5851998 2 -   7175178 AA
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13350501 2 +  41866177 AA
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          11991 2 +     92910 AA
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11531551 2 +  16010500 AT
i Erinaceus_europaeus.JH835290.1                        I 8 C 0
s Erythrocebus_patas.Contig8                             48770386 2 -  48907691 AA
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          314093 2 +    330699 AA
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             60547 2 +     89355 AA
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              4169 2 +     13586 AA
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               4106 2 -      6809 AA
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            10579 2 +     36558 AA
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             6898 2 +     60246 AA
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                10377 2 +    109717 AA
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               14760 2 +     16540 AA
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                15033 2 +     27497 AA
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           17490 2 +     26808 AA
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                32225 2 +     46535 AA
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              14947 2 -     29447 AA
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129892031 2 - 159252932 AA
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129279100 2 - 158578461 AA
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 20245 2 +     52776 AA
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Galago_moholi.ctg555                                     210075 2 -    847004 AA
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           12454 2 -     43889 AA
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           9522 2 +     27357 AA
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               155381 2 +    324696 AA
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    180345 2 -    189561 aA
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           12233 2 -     18683 AA
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               4451 2 -     14630 AA
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119651550 2 - 195582420 AA
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   76724 2 +    118900 AA
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                          970 2 +     10286 AA
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_1254239                            9146 2 +      9690 AA
i Hapalemur_gilberti.k141_1254239                       C 0 C 0
s Hapalemur_griseus.k141_1387522                             4775 2 +     56096 AA
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        28025 2 -     42470 AA
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        44649 2 -     54384 AA
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              16268 2 +     53719 AA
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                26543 2 -     91191 AA
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2550192 2 +  31725842 AA
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               56634 2 +     73687 AA
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 I 4
s Hippopotamus_amphibius.HipAmp_scaffold_1308              146168 2 +    277961 AA
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      277457 2 -    477199 AA
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              6616 2 -      9143 AA
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      3857 2 -   7690867 AA
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 16353 2 -     67322 AA
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           18086 2 -    119109 AA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              4283 2 +      5897 AA
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_624065                               1147 2 +      2112 AA
i Hylobates_agilis.k141_624065                          C 0 C 0
s Hylobates_klossii.k141_466549                             10723 2 +     11537 AA
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14623828 2 -  25970782 AA
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            1084 2 -      2977 AA
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     5262 2 +     22540 AA
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7124983 2 +  13083262 AA
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_4418183                                    589 2 -      1457 AA
i Indri_indri.k141_4418183                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               8087 2 +     17520 AA
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8564817 2 +  11848649 AA
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               22707 2 +     37189 AA
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          49305 2 -    147782 AA
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   113108 2 -    115756 AA
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 I 246
s Lemur_catta.scaffold_1                                258406330 2 - 285822530 AA
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        23082 2 +     39228 AA
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            52457 2 +     63517 AA
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        77707 2 +    116806 AA
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     30721 2 -     33031 AA
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3085029 2 -   3498232 AA
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    12071 2 +     22452 AA
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            135040 2 +   3060487 aa
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19247454 2 +  19376315 AA
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            9837 2 +     84689 AG
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3777586 2 +   6799190 AG
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20591162 2 -  62548349 AA
i Loxodonta_africana.GL010040.1                         C 0 I 4
s Lycaon_pictus.CM007556.1                               11086785 2 +  39895028 AA
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             19194 2 +     74745 AA
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12705650 2 +  12821369 AA
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                1295 2 -      3136 AA
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           46112 2 +     63263 AA
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                  815 2 -      2568 AA
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 1401 2 -      7381 AA
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  44619 2 -     79256 AA
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196034727 2 + 196197964 AA
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11444894 2 +  11645122 AA
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   3566 2 -     46448 AA
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                1238 2 -     13212 AA
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 14918 2 -     55006 AA
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43840036 2 +  43892939 AA
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               16205 2 -     24607 AA
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               3571 2 -     27140 AA
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                700657 2 +    802869 AA
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43436613 2 -  43563597 AA
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4449439 2 -   4543643 AA
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36872822 2 +  64221397 AA
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       63460 2 -    234502 AA
i Megaderma_lyra.MegLyr_scaffold_3562                   I 6 C 0
s Mellivora_capensis.MelCap_flattened_line_146202            1824 2 -      1999 AA
i Mellivora_capensis.MelCap_flattened_line_146202       C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               11820 2 +     15977 AA
i Meriones_unguiculatus.MerUng_scaffold_52233           I 6 C 0
s Mesocricetus_auratus.KB708139.1                         1046024 2 -  26018355 AA
i Mesocricetus_auratus.KB708139.1                       I 6 C 0
s Microcebus_murinus.CM007691.1                          16509335 2 +  47401472 AA
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               21750 2 -     32043 AA
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22819165 2 -  98408828 AA
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8208745 2 +  10048721 AA
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            33402 2 +     45743 AA
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         1166 2 +     29742 AA
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        10542 2 -    104932 AA
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     4725 2 +      8497 AA
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 145475 2 +    154973 AA
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                160261 2 +    265003 AA
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 3646 2 -      4346 AA
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  143964 2 -    168139 AA
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          18621 2 -    100666 GA
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70765670 2 +  92629107 AA
i Mus_caroli.LT608236.1                                 I 6 C 0
s Mus_musculus.chr16                                     75488708 2 +  98207768 AA
i Mus_musculus.chr16                                    I 6 C 0
s Mus_pahari.LT608305.1                                  67554943 2 +  89017189 AA
i Mus_pahari.LT608305.1                                 I 6 C 0
s Mus_spretus.CM004110.1                                 74329887 2 +  97876770 AA
i Mus_spretus.CM004110.1                                I 6 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             10711 2 +     98495 aa
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4423403 2 -  28371801 AA
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     89143 2 -    117718 AA
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               966916 2 +   8389877 AA
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5018592 2 +   6462685 AA
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3464496 2 -   3747815 AA
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         9711 2 +     66751 AA
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             4111 2 -      8794 AA
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            117502 2 +    362372 AA
i Nannospalax_galili.KL201303.1                         I 6 C 0
s Nasalis_larvatus.k141_153429                               7668 2 +     48152 AA
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4483934 2 -  14209539 AA
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3950089 2 -   4490290 AA
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  48365 2 +     94413 AA
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_302224                            1125 2 +      1516 AA
i Nomascus_annamensis.k141_302224                       I 26 C 0
s Nomascus_concolor.k141_226614                               385 2 -      5092 AA
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_642452                            1168 2 +      2851 AA
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_a.k141_595747                                  1806 2 +      4512 AA
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                29813 2 +   3668941 AA
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65566271 2 -  95554990 AA
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            3000 2 +      6470 AA
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65668609 2 +  89412551 AA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4995153 2 -  23139505 AG
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3684684 2 +  10294119 AA
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             678598 2 -   3126709 AA
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1078777 2 +   1425656 AA
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         36071 2 +     78940 AA
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  124422 2 +    145789 AA
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  36223 2 +     62360 AA
i Onychomys_torridus.OnyTor_scaffold_12578              I 6 C 0
s Orcinus_orca.KB316965.1                                 7223772 2 -   7562323 AA
i Orcinus_orca.KB316965.1                               C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141875090 2 + 163896628 AA
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      307095 2 -    505867 AA
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       38171 2 +     38679 AA
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18007599 2 -  38779656 AA
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134076337 2 - 275406953 AA
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      77551 2 +    140051 AA
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127573811 2 - 205426864 AA
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120150964 2 - 196562556 AA
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  33409 2 +    295523 AA
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3637145 2 +  18214204 AA
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5026804 2 -   6340057 AA
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1065198 2 -   1292953 AA
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188155404 2 - 188283584 AA
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             3721 2 +      5367 AA
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47512792 2 +  47705337 AA
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 66770 2 -    104429 AA
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    5302 2 +     14967 AA
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 1163 2 -      7628 AA
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    114837 2 -    135482 AA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           4586 2 -     23713 AA
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            23895 2 -     27972 AA
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      42733 2 -     45160 TA
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4949455 2 -   8017169 AA
i Peromyscus_maniculatus.KI615518.1                     I 6 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    11621 2 -     36578 AA
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            120389 2 -    122454 AA
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1987485                           1190 2 -      5908 AA
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       1810 2 -     17985 AA
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            1177 2 +      7694 AA
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26739655 2 +  26888534 AA
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            96561 2 +    112873 AA
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             42787 2 -     61926 AA
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        24218 2 +     78826 AA
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              8167 2 -     15800 AA
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        11365 2 -     16101 AA
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          4674 2 +      9673 AA
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13473670 2 -  19735023 AA
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           12576 2 -     31692 AA
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           4457 2 +     21690 AA
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       22011 2 +     44506 AA
i Plecturocebus_bernhardi.k141_959214                   C 0 I 4
s Plecturocebus_brunneus.k141_498086                        22223 2 +     67491 AA
i Plecturocebus_brunneus.k141_498086                    C 0 I 4
s Plecturocebus_caligatus.k141_2539816                      12462 2 -     98129 AA
i Plecturocebus_caligatus.k141_2539816                  C 0 I 4
s Plecturocebus_cinerascens.k141_744510                     22062 2 +    147771 AA
i Plecturocebus_cinerascens.k141_744510                 C 0 I 4
s Plecturocebus_cupreus.k141_1223294                        22317 2 -     23762 AA
i Plecturocebus_cupreus.k141_1223294                    C 0 I 4
s Plecturocebus_dubius.k141_3565563                          2783 2 -     55515 AA
i Plecturocebus_dubius.k141_3565563                     C 0 I 4
s Plecturocebus_grovesi.k141_242819                         22136 2 +    152463 AA
i Plecturocebus_grovesi.k141_242819                     C 0 I 4
s Plecturocebus_hoffmannsi.k141_1595076                      8896 2 +      8943 AA
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 I 4
s Plecturocebus_miltoni.k141_841561                         11858 2 +    134592 AA
i Plecturocebus_miltoni.k141_841561                     C 0 I 4
s Plecturocebus_moloch.k141_890597                          22446 2 -     75465 AA
i Plecturocebus_moloch.k141_890597                      C 0 I 4
s Pongo_abelii.NDHI03003816.1                              186336 2 -    373494 AA
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19806984 2 +  19899266 AA
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               4912 2 -     15069 AA
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              5046 2 +     14865 AA
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                76498 2 +     78963 AA
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 I 4
s Prolemur_simus.MPIZ01000048.1                           6847711 2 +  12164890 AA
i Prolemur_simus.MPIZ01000048.1                         C 0 I 4
s Propithecus_coquerelli.NW_012147997.1                    666930 2 -   2312742 AA
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         2757 2 +     11805 AA
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           42093 2 +     52369 AA
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         34483 2 -     44753 AA
i Propithecus_edwardsi.k141_1317105                     C 0 I 4
s Propithecus_perrieri.k141_7554                            16403 2 +     27322 AA
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       16039 2 -     53241 AA
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         38311 2 -     48185 AA
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           33355 2 +     77221 AA
i Psammomys_obesus.NESX01026517.1                       I 6 C 0
s Pteronotus_parnellii.KE867983.1                            2929 2 -     27784 AT
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        245712 2 -    344369 AA
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13245044 2 -  17261082 AA
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             602994 2 -   3946241 AA
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131533389 2 - 161321710 AA
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             29030 2 +     56732 AA
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6805521 2 +   6970761 AA
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             4915 2 +     18040 AA
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                14854 2 +     68503 AA
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13914642 2 +  90463843 AA
i Rattus_norvegicus.chr11                               I 6 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1786859 2 +   2252614 AA
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_1391695                           1143 2 -      1866 AA
i Rhinopithecus_bieti.k119_1391695                      C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206376800 2 - 206558726 AA
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44855700 2 -  45163003 AA
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                18334 2 +    109198 AA
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       6654 2 +     12214 AA
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15671874 2 -  43202129 AA
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        3791 2 +     34089 AA
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              3732 2 -     60842 AA
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              3827 2 +     67014 AA
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              3805 2 +     60816 AA
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 3742 2 -     76454 AA
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17340468 2 -  30362882 AA
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         19827 2 -     62485 AA
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   30416 2 -    114521 AG
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        2527 2 +     15331 AA
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       7924 2 +     20762 AA
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         117922 2 +    130994 AA
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           36713 2 +     46263 AA
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     29827 2 +     42640 AA
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        12871 2 +     30600 AA
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   99422 2 -    120886 AA
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            17035 2 +    739146 AT
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17750706 2 -  27805282 GT
i Sorex_araneus.JH798170.1                              I 1050 C 0
s Spermophilus_dauricus.KZ294190.1                        2238903 2 +   2842873 AA
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             233838 2 -    276980 AA
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            26628 2 +     62062 AA
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189270919 2 + 218635234 AA
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        14085 2 -  13920577 AA
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               5087 2 -      6213 GA
i Tadarida_brasiliensis.TadBra_scaffold_145589          I 7 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               13787 2 +     45698 AA
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      805790 2 +   1148477 AA
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  56447 2 +     99546 AA
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               25609 2 +     42269 AA
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               58925 2 +     65473 AA
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194006931 2 - 194193292 AA
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             38435 2 -     47444 AA
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  4648 2 +      6782 AA
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  134935 2 -    259118 AA
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        26034 2 +     38948 AA
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   19761 2 -     32910 AA
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      1148 2 -     12939 AA
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       1083 2 -     14244 AA
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           42481 2 -     54611 AA
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                         287 2 -     11566 AA
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     2459 2 -     15592 AA
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          1116 2 +     14371 AA
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  50868 2 +     51589 AA
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       14049 2 +     14732 AA
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       4521 2 -     28054 AA
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44659321 2 -  44834318 AA
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       1624 2 +     13828 AA
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   4231 2 +     90398 AC
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16081625 2 +  31416278 AA
i Trichechus_manatus.JH594618.1                         C 0 I 4
s Tursiops_truncatus.MRVK01000923.1                      69312489 2 -  96451834 AA
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_139357                   942 2 +      2103 AA
i Uropsilus_gracilis.UroGra_scaffold_139357             C 0 C 0
s Ursus_maritimus.KK498671.1                              6513845 2 +  28682327 AA
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  4415 2 -     20643 AA
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             23956 2 -     33872 AA
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1523728 2 -   2331223 AA
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                137192 2 -    281493 AA
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       126007 2 -    134049 AA
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        213324 2 -    227762 AA
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           5984 2 -      8775 AA
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Dinomys_branickii.DinBra_scaffold_1996                   156356 54 +    228994 I
e Orycteropus_afer.OryAfe_flattened_line_13509              43378 16 -     66828 I
e Microgale_talazaci.MicTal_scaffold_34660                  30638 409 -     48017 I
e Manis_pentadactyla.KN017078.1                             35015 87 +     58827 I
e Manis_javanica.JSZB01003966.1                            144940 87 +    252755 I
e Elephantulus_edwardii.JH947210.1                        7804622 10712 +  15467074 I
e Echinops_telfairi.JH980316.1                           22994192 422 -  44670279 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     14107 296 -     20485 I
e Hylobates_pileatus_a.tarseq_592                             33311 5 -     60944 I
e Tupaia_tana.TupTan_flattened_line_68454                    4094 206 +     13056 I
e Tupaia_chinensis.KB320831.1                             2791839 261 -   3938065 I
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I
e Nomascus_siki_b.tarseq_80                             24175 0 -  18771707 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               11073 13 +    209709 CTCT-TG-AAATTGC
s Acinonyx_jubatus.LLWD01000356.1                         2033054 13 +   3721120 CCTT-TT-AAATTAC
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    111719 13 -    189883 CTCT-TG-CAATTAC
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10656371 13 +  23371972 ACCC-TT-AAATCAC
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7093519 13 -  16596857 CCCC-TT-AAATCAT
i Ailurus_fulgens.LNAC01000003.1                        C 0 I 1
s Allactaga_bullata.AllBul_scaffold_70162                   12088 13 -     22067 CCTT-CA-CAAATAA
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                    424 13 -     60446 CTCT-TT-AAATTAC
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         1145 13 -     29318 CTCT-TT-AAATTAC
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                           82 13 +     38766 CTCT-TT-AAATTAC
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          1039 13 -     80423 CTCT-TT-AAATTAC
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             9338 13 -     18050 CTCT-TT-AAATTAC
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                 10428 13 -     11521 CTCT-TT-AAATTAC
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                             10015 13 -     21359 CTCT-TT-AAATTAC
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_298055                                 1309 13 +      1823 CTCT-TT-AAATTAC
i Alouatta_juara.k141_298055                            C 0 C 0
s Alouatta_macconnelli.k141_1331706                          9311 13 -     10438 CTCT-TT-AAATTAC
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            5967 13 +      7047 CTCT-TT-AAATTAC
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             9247 13 +     10410 CTCT-TT-AAATTAC
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            3055 13 -      4927 CTCT-TT-AAATTAC
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             5984 13 +      6429 CTCT-TT-AAATTAC
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3519197 13 +   4113121 CCCT-TT-AAATTAC
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      389367 13 -    631301 TCCT-TT-AAATTAC
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            29780 12 +     33004 CCCT--T-AAATTAT
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 61697 13 +     78111 CTCT-TT-AAATTAC
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            4638 13 +     22701 CTCT-TT-AAATTAC
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5748595 13 +   9889416 CTCT-TT-AAATTAC
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             5180 13 -    104377 CTCT-TT-AAATTAC
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               5186 13 +     23246 CTCT-TT-AAATTAC
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     2842 13 +      5067 CCCT-TT-GGACCAC
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_587554                         194 13 +      9265 CTCT-AC-AAATTGC
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 7770 13 -     29036 TCCT-TT-CAATTAC
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9538443 13 +  39197703 CTCT-TT-AAATTAC
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             59714 13 +     85812 CTCT-TT-AAATTAC
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                10726 13 +     89302 CTCT-TT-AAATTAC
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             15231 13 -     58268 CTCT-TT-AAATTAC
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             63222 13 +    119057 CTCT-TT-AAATTAC
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               5191 13 -     25888 CTCT-TT-AAATTAC
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 5830 13 -     16375 CTCT-TT-GAGCTAC
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              2150 13 +      2719 CTCT-TT-GAGCTAC
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26379211 13 +  51448160 ACCT-TT-AAATTAC
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        4442 13 -     13118 ACCT-TT-AAATTAC
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   42260 13 -     72089 CCCT-TT-AAATTAC
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6558571 13 +   6870073 ccct-tt-aaattac
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138138797 13 - 161108492 CCCT-TT-AAATTAC
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     571249 13 -    998990 CCCT-TT-AAATTAC
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136294530 13 - 158972876 CCCT-TT-AAATTAC
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1230296 13 -   1914593 CCCT-TA-AAATTAC
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               113084 13 -    171031 CTCT-TT-AAATTAC
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 12112 13 +    125063 CTCT-TT-AAATTAC
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                14157 13 -    216513 CTCT-TT-AAATTAC
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        6697 13 -    134917 CTCT-TT-AAATTAC
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3218621 13 -   8989139 CCCT-TT-AAATTAC
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           396326 13 -  15254737 CCCT-TT-AAATTAC
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2972059 13 +   6889770 CTCT-TT-AAATTAC
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11518134 13 +  39901454 CCCT-TT-AAATAAT
i CanFam4.chr31                                         C 0 I 220
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   13158 13 +     87036 CCCT-TT-AAATAAT
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 I 220
s Canis_lupus_dingo.QKWQ01001993.1                       11264798 13 -  35597290 CCCT-TT-AAATAAt
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 I 223
s Canis_lupus_familiaris.chr31                           11087331 13 +  39895921 CCCT-TT-AAATAAt
i Canis_lupus_familiaris.chr31                          C 0 I 223
s Canis_lupus_orion.HG994411.1                           16454350 13 -  44759192 CCCT-TT-AAATAAt
i Canis_lupus_orion.HG994411.1                          C 0 I 220
s Capra_aegagrus.CM003214.1                              21324273 13 + 157394656 ccct-tt-aaattac
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135705500 13 - 157403528 ccct-tt-aaattac
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_979108                  1084 13 -      1248 CATT-TT-CAGTTAC
i Capromys_pilorides.CapPil_scaffold_979108             C 0 C 0
s Carlito_syrichta.NW_007248099.1                          308127 13 +    345090 CCCT-TT-AAATTAC
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               58568 13 +     67245 TGCT-TT-AAATTAC
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   29777 13 +     33760 CCTT-TT-CAATTTA
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   157833 13 -    276539 CCCT-TC-AAATTAC
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15785714 13 -  24422027 tatt-tt-caattac
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15797648 13 -  24440124 tatt-tt-caattac
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       175839 13 +    436027 TATT-TT-CAATTAC
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18889927 13 -  29618158 CTCT-TT-AAATTAC
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 7471 13 -     26817 CTCT-TT-AAATTAC
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                11711 13 +     25043 CTCT-TT-AAATTAC
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         7160 13 +     21754 CTCT-TT-AAATTAC
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4362936 13 +   7569818 CTCT-TT-AAATTAC
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         2688 13 -      9338 CTCT-TT-AAATTAC
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6554367 13 +   6739814 CTCT-TT-AAATTAC
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      25844 13 +     60454 CTCT-TT-AAATTAC
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          1049 13 -     21101 CTCT-TT-AAATTAC
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         58359 13 -    107033 CTCT-TT-AAATTAC
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        1251 13 -     17608 CTCT-TT-AAATTAC
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          28746 13 +     30494 CTCT-TT-AAATTAC
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          57592 13 -     59240 CTCT-TT-AAATTAC
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          1293 13 +     16677 CTCT-TT-AAATTAC
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           23451 13 +     35983 CTCT-TT-AAATTAC
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11989979 13 +  12117833 CTCT-TT-AAATTAC
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46476737 13 +  46592721 CTCT-TT-AAATTAC
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      40288 13 -     45581 CTCT-TT-AAATTAC
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       1294 13 +     35577 CTCT-TT-AAATTAC
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        1070 13 -     25661 CTCT-TT-AAATTAC
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        1048 13 -     17744 CTCT-TT-AAATTAC
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        20664 13 +     37128 CTCT-TT-AAATTAC
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           1879 13 -      6963 TCCT-TT-AAATTAC
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           58127 13 -     68416 CTCT-TT-AAGTTAC
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            7170 13 +     13308 CTCT-TT-AAGTTAC
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             4727 13 -     18223 CTCT-TT-AAATTAC
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             21750 13 +     25473 CTCT-TT-AAATTAC
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           40785 13 +     57117 CTCT-TT-AAATTAC
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          45464 13 +     54541 CTCT-TT-AAATTAC
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15960861 13 +  43084221 CATT-TT-CAATTAC
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         70286 13 +    196370 CTCT-TT-AAACTAC
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          14466 13 +     40510 CTCT-TT-AAACTAC
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15138210 13 -  15256731 CTCT-TT-AAATTAC
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      33257 13 -     53260 CTCT-TT-AAATTAC
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101143821 13 + 101219884 CTCT-TT-AAATTAC
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                15553 13 -     21363 TCTT-TT-AAAATAC
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           760861 13 +    964067 TCTT-TT-AAAATAC
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10885587 13 +  10971483 CTCT-TT-AAATTAC
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147663751 13 + 156195979 CTCT-TT-AAATTAC
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            15736 13 +     23629 CTCT-TT-AAATTAC
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60611675 13 +  78930452 GCCT-TC-AAATTCA
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         38676 13 -     40477 CTCT-TTAAAT-TAC
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 277641 13 -    399297 CCCT-TG-CAATTAC
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53028317 13 +  72327488 CTCT-CG-CAATTGC
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             18927 13 -     19186 ACCT-TT-AATGCAC
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            51064 13 -     70449 CCTT-TT-AAATTAC
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  207293 13 -    956709 CTCT-TT-CAATTAC
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 29862 13 -     67205 CATT-TT-CGATTAC
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                16870 13 +     26546 CATT-TT-CAATTAC
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             57962 13 -    236241 CATT-TT-CAATTAC
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          182717 13 -   6883506 TCCT-CT-AAATTAC
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16843986 13 +  31942871 CTCT-TT-AAATTAC
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80035889 13 -  96802777 ACCT-TT-AAATTAC
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18697877 13 -  18957592 TCCT-TT-AAATTAT
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 321583 13 +    993696 CCCT-TT-AAATTAC
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   2235 13 +    151128 CTCT-TT-AAATTAC
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dipodomys_ordii.KN672545.1                              3655258 13 +   4240102 CTCT-TT-CAATGCT
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 26891 13 +     28912 CTCT-TT-CAATGCT
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                35209 13 -     73477 CATT-TT-CAATTAT
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Eidolon_helvum.KE772537.1                                 11245  8 +     24177 CACT-TT------AT
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1490548 13 +   1727528 CCCT-TT-AAATTAC
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        238874 13 -    369425 CCCT-TT-CAATTAC
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           5987 13 -      7838 CCCT-TT-CAATTAC
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85871226 13 +  99434291 CCCC-TT-AAATCAC
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4703263 13 +   6522550 CCCT-TT-AAATTAC
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5852000 13 -   7175178 CCCT-TT-AAATTAC
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13350503 13 +  41866177 CCCT-TT-AAATTAC
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          11993 13 +     92910 CCCT-TT-AAATTAC
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11531553 13 +  16010500 TCCT-TT-AAATTAC
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48770388 13 -  48907691 CTCT-TT-AAATTAC
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          314095 13 +    330699 ACCT-TT-AAATTAC
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             60549 13 +     89355 ACCT-TT-AAATTAC
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              4171 13 +     13586 CTCT-TT-GAGTTAC
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               4108 13 -      6809 CTCT-TT-GAGTTAC
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            10581 13 +     36558 CTCT-TT-GAGTTAC
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             6900 13 +     60246 CTCT-TT-GAGTTAC
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                10379 13 +    109717 CTCT-TT-GAGTTAC
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               14762 13 +     16540 CTCT-TT-GAGTTAC
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                15035 13 +     27497 CTCT-TT-GAGTTAC
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           17492 13 +     26808 CTCT-TT-GAGTTAC
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                32227 13 +     46535 CTCT-TT-GAGTTAC
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              14949 13 -     29447 CTCT-TT-GAGTTAC
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129892033 13 - 159252932 CCTT-TT-AAATTAC
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129279102 13 - 158578461 CCTT-TT-AAATTAC
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 20247 13 +     52776 CCTT-TT-AAATTAC
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Galago_moholi.ctg555                                     210077 13 -    847004 CTCT-AC-AAATTAC
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           12456 13 -     43889 CTCT-AC-AAATTAC
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           9524 13 +     27357 CTCT-AC-AAATTAC
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               155383 13 +    324696 CCCT-TT-AAATTAC
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    180347 13 -    189561 CCCT-TT-AAATTGC
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           12235 13 -     18683 CCCT-TT-TGATTAA
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               4453 13 -     14630 CTCT-TT-AAATTAC
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119651552 13 - 195582420 CTCT-TT-AAATTAC
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   76726 13 +    118900 CCCT-TT-CAATTAA
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 I 3
s Hapalemur_alaotrensis.k141_1280836                          972 13 +     10286 CTCT-TT-GAGTTAC
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_1254239                            9148 13 +      9690 CTCT-TT-GAGTTAC
i Hapalemur_gilberti.k141_1254239                       C 0 C 0
s Hapalemur_griseus.k141_1387522                             4777 13 +     56096 CTCT-TT-GAGTTAC
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        28027 13 -     42470 CTCT-TT-GAGTTAC
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        44651 13 -     54384 CTCT-TT-GAGTTAC
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              16270 13 +     53719 CCTT-TT-AAATTAC
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                26545 13 -     91191 CCCT-TT-AAATTAC
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2550194 13 +  31725842 CATT-TT-CAATTAC
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               56640  3 +     73687 ------------TAC
i Heterohyrax_brucei.HetBruBak_scaffold_25354           I 4 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              146170 13 +    277961 TCTT-AT-AAATTAC
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      277459 13 -    477199 CCCTTTA-AAT-GAC
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              6618 13 -      9143 CCCTTTA-AAT-GAC
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      3859 13 -   7690867 CTCT-TC-AAATTGC
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 16355 13 -     67322 CCTT-TT-AAATTTC
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           18088 13 -    119109 CATT-TT-CAATTAC
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              4285 13 +      5897 CTCT-TC-AAATTGC
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_624065                               1149 13 +      2112 CTCT-TC-AAATTGC
i Hylobates_agilis.k141_624065                          C 0 C 0
s Hylobates_klossii.k141_466549                             10725 13 +     11537 CTCT-TC-AAATTGC
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14623830 13 -  25970782 CTCT-TC-AAATTGC
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            1086 13 -      2977 CTCT-TC-AAATTGC
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     5264 13 +     22540 CATT-CT-CAATTAC
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7124985 13 +  13083262 CCCT-TT-CAATTCT
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_4418183                                    591 13 -      1457 CTCT-TT-GAGTTAC
i Indri_indri.k141_4418183                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               8089 13 +     17520 ACCT-TT-AAATTAC
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8564819 13 +  11848649 CCCT-CA-CAAATAA
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               22709 13 +     37189 ACCT-TT-AAATTCC
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          49307 13 -    147782 CTCT-TT-AAATTAC
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   113356 13 -    115756 CCCT-TT-AAATTAC
i Lasiurus_borealis.LasBor_scaffold_5102                I 246 C 0
s Lemur_catta.scaffold_1                                258406332 13 - 285822530 CTCT-TC-GAGTTAC
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        23084 11 +     39228 CTC---T-AAGTTAT
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            52459 11 +     63517 CTC---T-AAGTTAT
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        77709 11 +    116806 CTC---T-AAGTTAT
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     30723 11 -     33031 CTC---T-AAGTTAT
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3085031 13 -   3498232 CCCC-TT-AAATCAC
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    12073 13 +     22452 CCAT-TT-AAATTAT
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            135042 13 +   3060487 acct-tt-aaattac
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19247456 13 +  19376315 CTCT-TT-AAATTAC
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            9839 13 +     84689 CTCT-AC-ATATTAC
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3777588 13 +   6799190 CTCT-AC-ATATTAC
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20591168  3 -  62548349 ------------TAC
i Loxodonta_africana.GL010040.1                         I 4 C 0
s Lycaon_pictus.CM007556.1                               11086787 13 +  39895028 CCCT-TT-AAATAAT
i Lycaon_pictus.CM007556.1                              C 0 I 223
s Macaca_arctoides.k141_2201161                             19196 13 +     74745 CCCT-TT-AAATTAC
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12705652 13 +  12821369 CCCT-TT-AAATTAC
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                1297 13 -      3136 CCCT-TT-AAATTAC
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           46114 13 +     63263 CCCT-TT-AAATTAC
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                  817 13 -      2568 CCCT-TT-AAATTAC
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 1403 13 -      7381 CCCT-TT-AAATTAC
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  44621 13 -     79256 CCCT-TT-AAATTAC
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196034729 13 + 196197964 CCCT-TT-AAATTAC
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11444896 13 +  11645122 CCCT-TT-AAATTAC
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   3568 13 -     46448 CCCT-TT-AAATTAC
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                1240 13 -     13212 CCCT-TT-AAATTAC
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 14920 13 -     55006 CCCT-TT-AAATTAC
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43840038 13 +  43892939 CCCT-TT-AAATTAC
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               16207 13 -     24607 CCCT-TT-AAATTAC
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               3573 13 -     27140 CCCT-TT-AAATTAC
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                700659  8 +    802869 CACT-TC------AT
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43436615 13 -  43563597 CTCT-GT-AAATTAC
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4449441 13 -   4543643 CTCT-GT-AAATTAC
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36872824 13 +  64221397 CCCT-TT-CAATTCT
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       63462 13 -    234502 ACCT-TTAAAG-TAT
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_146202            1826 13 -      1999 CCCC-TT-AAATCAC
i Mellivora_capensis.MelCap_flattened_line_146202       C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               11822 13 +     15977 CCCT-TG-CATTTAC
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1046026 13 -  26018355 CTCT-TG-CAATTAC
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Microcebus_murinus.CM007691.1                          16509337 13 +  47401472 CTCT-TT-CAGTTAC
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               21752 13 -     32043 CCCT-TT-AAATTAC
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22819167 13 -  98408828 CCCT-TT-CAATTAC
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8208747 13 +  10048721 CCCT-TT-AAATTAC
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            33404 13 +     45743 CCCT-TT-AAATTAC
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         1168 13 +     29742 CTCT-TT-ACATTAC
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        10544 13 -    104932 CCCC-TT-AAATCAC
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     4727 13 +      8497 CTCT-TT-TAGTTAC
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 145477 13 +    154973 ACCT-TT-AAATTAC
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                160263 13 +    265003 CTCT-TT-AAATTAC
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 3648 13 -      4346 CCCT-TT-AAATTAC
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  143966 13 -    168139 CCTT-TT-AAATTAC
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          18623 13 -    100666 CCCT-TT-AAATTAT
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70765672 13 +  92629107 CCCT-TG-CAATTAC
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75488710 13 +  98207768 CCTT-TG-CAATTAC
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67554945 13 +  89017189 CCCT-TG-CAATTAC
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74329889 13 +  97876770 CCCT-TG-CAATTAC
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             10713 13 +     98495 ccct-tc-caatcat
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4423405 13 -  28371801 CCCC-TT-AAATCAC
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     89145 13 -    117718 CATT-TT-CAGTTAC
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               966918 13 +   8389877 CCCT-TT-AAATTAC
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5018594 13 +   6462685 CCCT-TT-AAATTAC
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3464498 13 -   3747815 CCCT-TT-AAATTAC
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         9713 13 +     66751 CCCT-TT-AAATTAC
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             4113 13 -      8794 TCCT-TT-AAAGTAC
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            117504 13 +    362372 CCAT-TG-CAATTAT
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               7670 13 +     48152 CTCT-TT-AAATTAC
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4483936 13 -  14209539 CCCC-TT-AAATCAC
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3950091 13 -   4490290 ACCT-TT-AAATTAC
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  48367 13 +     94413 CTTT-TT-AAATTAC
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_302224                            1127 13 +      1516 CTCT-TC-AAATTGC
i Nomascus_annamensis.k141_302224                       C 0 C 0
s Nomascus_concolor.k141_226614                               387 13 -      5092 CTCT-TC-AAATTGC
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_642452                            1170 13 +      2851 CTCT-TC-AAATTGC
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_a.k141_595747                                  1808 13 +      4512 CTCT-TC-AAATTGC
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                29815 13 +   3668941 CCCT-TT-AAATAAT
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65566273 13 -  95554990 CTCT-GC-AAATTAC
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            3002 13 +      6470 CTCT-GC-AAATTAC
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65668611 13 +  89412551 CTCT-GC-AAATTAC
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4995155 13 -  23139505 CCAC-TC-AAATTAA
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3684686 13 +  10294119 CATT-TT-CTATTAC
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             678600 13 -   3126709 CCCC-TT-AAATCAC
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1078779 13 +   1425656 CCCT-TT-AAATTAC
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         36073 13 +     78940 CCCT-TT-AAATTGC
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  124424 13 +    145789 CCCT-TT-CAATTAC
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  36225 13 +     62360 CCCT-TG-CAATTAC
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7223774 13 -   7562323 ACCT-TT-AAATTAC
i Orcinus_orca.KB316965.1                               C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141875092 13 + 163896628 CCAT-CT-AAATTAT
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      307097 13 -    505867 CCCT-TT-AAATAAT
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       38173 13 +     38679 CTCT-GC-AAATTAC
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18007601 13 -  38779656 CTCT-AC-AAATTAC
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134076339 13 - 275406953 CCGT-TT-AAATTAC
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      77553 13 +    140051 CCCT-TT-AAATTAC
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127573813 13 - 205426864 CTCT-TT-AAATTAC
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120150966 13 - 196562556 CTCT-TT-AAATTAC
i Pan_troglodytes.CM009241.2                            C 0 I 6
s Panthera_onca.PanOnc_flattened_line_1615                  33411 13 +    295523 CCTT-TT-AAATTAC
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3637147 13 +  18214204 CCTT-TT-AAATTAC
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5026806 13 -   6340057 CCTT-TT-AAATTAC
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1065200 13 -   1292953 CCCT-TT-AAATTAC
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188155406 13 - 188283584 CTCT-TT-AAATTAC
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             3723 13 +      5367 CTCT-TT-AAATTAC
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47512794 13 +  47705337 CTCT-TT-AAATTAC
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 66772 13 -    104429 CTCT-TT-AAATTAC
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    5304 13 +     14967 CTCT-TT-AAATTAC
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 1165 13 -      7628 CTCT-TT-AAATTAC
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    114839 13 -    135482 CCTT-TT-AAATTGC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           4588 13 -     23713 CTCT-AT-AAATTAC
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            23897 13 -     27972 CTCT-AC-AAATTAC
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      42735 13 -     45160 CCCT-TT-CAATGTT
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4949457 13 -   8017169 CCCT-TG-CAATTAC
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    11623 13 -     36578 TAAT-TC-CATTCAT
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            120391 13 -    122454 ACCT-TT-AAATTAC
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1987485                           1192 13 -      5908 CTCT-TT-GAATTAC
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       1812 13 -     17985 CTCT-TT-GAATTAC
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            1179 13 +      7694 CTCT-TT-GAATTAC
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26739657 13 +  26888534 CTCT-TT-GAATTAC
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            96563 13 +    112873 CCCT-TT-AAATTAT
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             42789 13 -     61926 CTCT-TT-AAATTAC
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        24220 13 +     78826 CTCT-TT-AAATTAC
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              8169 13 -     15800 CTCT-TT-AAATTAC
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        11367 13 -     16101 CTCT-TT-AAATTAC
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          4676 13 +      9673 CTCT-TT-AAATTAC
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13473672 13 -  19735023 CTCT-TT-AAATTAC
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           12578 13 -     31692 CTCT-TT-AAATTAC
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           4459 13 +     21690 ACCT-TT-AAATTAC
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       22017  7 +     44506 --------AAATTAC
i Plecturocebus_bernhardi.k141_959214                   I 4 C 0
s Plecturocebus_brunneus.k141_498086                        22229  7 +     67491 --------AAATTAC
i Plecturocebus_brunneus.k141_498086                    I 4 C 0
s Plecturocebus_caligatus.k141_2539816                      12468  7 -     98129 --------AAATTAC
i Plecturocebus_caligatus.k141_2539816                  I 4 C 0
s Plecturocebus_cinerascens.k141_744510                     22068  7 +    147771 --------AAATTAC
i Plecturocebus_cinerascens.k141_744510                 I 4 C 0
s Plecturocebus_cupreus.k141_1223294                        22323  7 -     23762 --------AAATTAC
i Plecturocebus_cupreus.k141_1223294                    I 4 C 0
s Plecturocebus_dubius.k141_3565563                          2789  7 -     55515 --------AAATTAC
i Plecturocebus_dubius.k141_3565563                     I 4 C 0
s Plecturocebus_grovesi.k141_242819                         22142  7 +    152463 --------AAATTAC
i Plecturocebus_grovesi.k141_242819                     I 4 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      8902  7 +      8943 --------AAATTAC
i Plecturocebus_hoffmannsi.k141_1595076                 I 4 C 0
s Plecturocebus_miltoni.k141_841561                         11864  7 +    134592 --------AAATTAC
i Plecturocebus_miltoni.k141_841561                     I 4 C 0
s Plecturocebus_moloch.k141_890597                          22452  7 -     75465 --------AAATTAC
i Plecturocebus_moloch.k141_890597                      I 4 C 0
s Pongo_abelii.NDHI03003816.1                              186338 13 -    373494 CTCT-TT-AAATTGC
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19806986 13 +  19899266 CTCT-TT-AAATTGC
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               4914 13 -     15069 CTCT-TT-AAATTAC
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              5048 13 +     14865 CTCT-TT-AAATTAC
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                76504  3 +     78963 ------------TAC
i Procavia_capensis.ProCapCap_scaffold_15315            I 4 C 0
s Prolemur_simus.MPIZ01000048.1                           6847717  7 +  12164890 --------GAGTTAC
i Prolemur_simus.MPIZ01000048.1                         I 4 C 0
s Propithecus_coquerelli.NW_012147997.1                    666932 13 -   2312742 CTCT-TT-GAGTTAC
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         2759 13 +     11805 CTCT-TT-CAGTTAC
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           42095 13 +     52369 CTCT-TT-GAGTTAC
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         34489  7 -     44753 --------GAGTTAC
i Propithecus_edwardsi.k141_1317105                     I 4 C 0
s Propithecus_perrieri.k141_7554                            16405 13 +     27322 CTCT-TT-GAGTTAC
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       16041 13 -     53241 CTCT-TT-GAGTTAC
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         38313 13 -     48185 CTCT-TT-GAGTTAC
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           33357 13 +     77221 CCCT-TG-CAATTAC
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            2931 13 -     27784 CTCT-TT-AAACTAC
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        245714 13 -    344369 CCCC-TT-AAATCAC
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13245046  8 -  17261082 CACT-TT------AT
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             602996  8 -   3946241 CACT-TT------AT
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131533391 13 - 161321710 CCTT-TT-AAATTAC
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             29032 13 +     56732 CTCT-TT-AAATTAC
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6805523 13 +   6970761 CTCT-TT-AAATTAC
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             4917 13 +     18040 CTCT-TT-AAATTAC
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                14856 13 +     68503 CCCT-TT-AAATTAC
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13914644 13 +  90463843 CTCT-TA-AAATTAC
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1786861 12 +   2252614 CCCT-TA-AAT-GGC
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_1391695                           1145 13 -      1866 CTCT-TT-AAATTAC
i Rhinopithecus_bieti.k119_1391695                      C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206376802 13 - 206558726 CTCT-TT-AAATTAC
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44855702 13 -  45163003 CTCT-TT-AAATTAC
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                18336  8 +    109198 CACT-TT------AT
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       6656 13 +     12214 TGCT-TT-AAATTAC
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15671876 13 -  43202129 CTCT-TT-AAATTAC
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        3793 13 +     34089 CTCT-TT-AAATTAC
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              3734 13 -     60842 CTCT-TT-AAATTAC
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              3829 13 +     67014 CTCT-TT-AAATTAC
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              3807 13 +     60816 CTCT-TT-AAATTAC
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 3744 13 -     76454 CTCT-TT-AAATTAC
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17340470 13 -  30362882 CTCT-TT-AAATTAC
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         19829 13 -     62485 CTCT-TT-AAATTAC
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   30418 13 -    114521 GCCT-TT-AAATTAC
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        2529 13 +     15331 CTCT-TT-AAATTAC
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       7926 13 +     20762 CTCT-TT-AAATTAC
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         117924 13 +    130994 CTCT-TT-AAATTAC
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           36715 13 +     46263 CTCT-TT-AAATTAC
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     29829 13 +     42640 CTCT-TT-AAATTAC
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        12873 13 +     30600 CTCT-TT-AAATTAC
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   99424 12 -    120886 CCCT-TG-CAA-TAC
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            17037 13 +    739146 CTTT-TA-AAATTAC
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17750708 13 -  27805282 ACTT-TT-GATGCAC
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2238905 13 +   2842873 CCCT-TT-CAATTCT
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             233840 13 -    276980 CCCC-TT-AAATCAC
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            26630 13 +     62062 CCTT-TT-AAATTAC
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189270921 13 + 218635234 CCCT-TT-AAATCAC
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        14087 13 -  13920577 CTCT-TC-AAATTGC
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               5089 13 -      6213 CCCT-TT-AAATCAC
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               13789 13 +     45698 TCCT-TT-AAAGTAC
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      805792 13 +   1148477 CCTT-TT-AAATTAC
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  56449 13 +     99546 CCCT-TT-AAATTAC
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               25611 13 +     42269 CCCT-TT-AAATTTT
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               58927 13 +     65473 CCCT-TT-AAATTTT
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194006933 13 - 194193292 CTCT-TT-AAATTAC
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             38437 13 -     47444 TATT-TT-CACTTAC
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  4650 13 +      6782 TCCT-TT-AAATTAC
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  134937 13 -    259118 TCCT-TT-AAATTAC
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        26036 13 +     38948 CTCT-TT-AAATTAC
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   19763 13 -     32910 CTCT-TT-AAATTAC
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      1150 13 -     12939 CTCT-TT-AAATTAC
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       1085 13 -     14244 CTCT-TT-AAATTAC
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           42483 13 -     54611 CTCT-TT-AAATTAC
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                         289 13 -     11566 CTCT-TT-AAATTAC
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     2461 13 -     15592 CTCT-TT-AAATTAC
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          1118 13 +     14371 CTCT-TT-AAATTAC
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  50870 13 +     51589 CTCT-TT-AAATTAC
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       14051 13 +     14732 CTCT-TT-AAATTAC
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       4523 13 -     28054 CTCT-TT-AAATTAC
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44659323 13 -  44834318 CTCT-TT-AAATTAC
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       1626 13 +     13828 CTCT-TT-AAATTAC
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   4233 13 +     90398 CCCT-TT-AAATTAC
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16081631  3 +  31416278 ------------TAC
i Trichechus_manatus.JH594618.1                         I 4 C 0
s Tursiops_truncatus.MRVK01000923.1                      69312491 13 -  96451834 ACCT-TT-AAATTAC
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_139357                   944 13 +      2103 GCCT-TT-AAATTAT
i Uropsilus_gracilis.UroGra_scaffold_139357             C 0 C 0
s Ursus_maritimus.KK498671.1                              6513847 13 +  28682327 CCCC-TT-AAATCAC
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  4417 13 -     20643 CTCT-CT-AAGTGAC
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             23958 13 -     33872 CTCT-CT-AAGTGAC
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1523730 13 -   2331223 CCCT-TT-AAATTAC
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                137194 13 -    281493 CCCT-TT-AAATAAT
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       126009 13 -    134049 CCCT-TT-CAATTCT
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        213326 13 -    227762 CCCC-TT-AAATCAC
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           5986 13 -      8775 ACCT-TT-AAATTAC
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Dinomys_branickii.DinBra_scaffold_1996                   156356 54 +    228994 I
e Orycteropus_afer.OryAfe_flattened_line_13509              43378 16 -     66828 I
e Microgale_talazaci.MicTal_scaffold_34660                  30638 409 -     48017 I
e Manis_pentadactyla.KN017078.1                             35015 87 +     58827 I
e Manis_javanica.JSZB01003966.1                            144940 87 +    252755 I
e Elephantulus_edwardii.JH947210.1                        7804622 10712 +  15467074 I
e Echinops_telfairi.JH980316.1                           22994192 422 -  44670279 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     14107 296 -     20485 I
e Hylobates_pileatus_a.tarseq_592                             33311  5 -     60944 I
e Tupaia_tana.TupTan_flattened_line_68454                    4094 206 +     13056 I
e Tupaia_chinensis.KB320831.1                             2791839 261 -   3938065 I
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I
e Nomascus_siki_b.tarseq_80                             24175  0 -  18771707 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               11086 6 +    209709 AAA-C-A-C
s Acinonyx_jubatus.LLWD01000356.1                         2033067 6 +   3721120 AAG-T-A-T
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    111732 3 -    189883 AA--T----
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 I 2
s Ailuropoda_melanoleuca.LNAT01000321.1                  10656384 6 +  23371972 AAA-T-A-C
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7093533 2 -  16596857 ------A-C
i Ailurus_fulgens.LNAC01000003.1                        I 1 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   12101 6 -     22067 AG--TTG-C
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                    437 6 -     60446 AAG-C-A-C
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         1158 6 -     29318 AAG-C-A-C
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                           95 6 +     38766 AAG-C-A-C
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          1052 6 -     80423 AAG-C-A-C
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             9351 6 -     18050 AAA-C-A-C
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                 10441 6 -     11521 AAA-C-A-C
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                             10028 6 -     21359 AAA-C-A-C
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_298055                                 1322 6 +      1823 AAA-C-A-C
i Alouatta_juara.k141_298055                            C 0 C 0
s Alouatta_macconnelli.k141_1331706                          9324 6 -     10438 AAA-C-A-C
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            5980 6 +      7047 AAA-C-A-C
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             9260 6 +     10410 AAA-C-A-C
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            3068 6 -      4927 AAA-C-A-C
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             5997 6 +      6429 AAA-C-A-C
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3519210 6 +   4113121 AAA-T-A-T
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      389380 6 -    631301 AAG-G-A-C
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            29792 6 +     33004 AAA-T-A-T
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 61710 6 +     78111 AAA-C-A-C
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            4651 6 +     22701 AAA-C-A-C
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5748608 6 +   9889416 AAA-C-A-C
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             5193 6 -    104377 AAA-C-A-C
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               5199 6 +     23246 AAA-C-A-C
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     2855 6 +      5067 AG-TT-G-C
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_587554                         207 6 +      9265 AAG-C-A-T
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 7783 6 -     29036 AAG-G-A-C
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9538456 6 +  39197703 AAA-C-A-C
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             59727 6 +     85812 AAA-C-A-C
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                10739 6 +     89302 AAA-C-A-C
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             15244 6 -     58268 AAA-C-A-C
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             63235 6 +    119057 AAA-C-A-C
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               5204 6 -     25888 AAA-C-A-C
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 5843 6 -     16375 AAG-C-A-C
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              2163 6 +      2719 AAG-C-A-C
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26379224 6 +  51448160 AAG-G-A-C
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        4455 6 -     13118 AAG-G-A-C
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   42273 6 -     72089 AAA-T-A-C
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6558584 6 +   6870073 aaa-t-A-C
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138138810 6 - 161108492 AAA-T-A-C
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     571262 6 -    998990 AAA-T-A-C
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136294543 6 - 158972876 AAA-T-A-C
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1230309 6 -   1914593 AAA-T-A-C
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               113097 6 -    171031 AAA-C-A-C
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 12125 6 +    125063 AAA-C-A-C
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                14170 6 -    216513 AAA-C-A-C
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        6710 6 -    134917 AAA-C-A-C
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3218634 6 -   8989139 AAC-T-A-C
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           396339 6 -  15254737 AAC-T-A-C
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2972072 6 +   6889770 AAC-T-A-C
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11518367 6 +  39901454 AAG-T-A-C
i CanFam4.chr31                                         I 220 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   13391 6 +     87036 AAG-T-A-C
i Canis_lupus_VD.CanFam_VD_scaffold_16982               I 220 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11265034 6 -  35597290 aag-t-a-c
i Canis_lupus_dingo.QKWQ01001993.1                      I 223 C 0
s Canis_lupus_familiaris.chr31                           11087567 6 +  39895921 aag-t-a-c
i Canis_lupus_familiaris.chr31                          I 223 C 0
s Canis_lupus_orion.HG994411.1                           16454583 6 -  44759192 aag-t-a-c
i Canis_lupus_orion.HG994411.1                          I 220 C 0
s Capra_aegagrus.CM003214.1                              21324286 6 + 157394656 aaa-t-A-C
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135705513 6 - 157403528 aaa-t-A-C
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_979108                  1097 6 -      1248 AA--TTG-C
i Capromys_pilorides.CapPil_scaffold_979108             C 0 C 0
s Carlito_syrichta.NW_007248099.1                          308140 6 +    345090 AAG-A-A-C
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               58581 6 +     67245 AAG-G-A-C
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   29790 6 +     33760 AA--TTA-C
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   157846 6 -    276539 GGG-T-A-C
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15785727 6 -  24422027 aA--TGT-C
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15797661 6 -  24440124 aA--TGT-C
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       175852 6 +    436027 AA--TGT-C
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18889940 6 -  29618158 AAA-C-A-C
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 7484 6 -     26817 AAA-C-A-C
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                11724 6 +     25043 AAA-C-A-C
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         7173 6 +     21754 AAG-A-A-C
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4362949 6 +   7569818 AAG-T-A-C
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         2701 6 -      9338 AAG-T-A-C
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6554380 6 +   6739814 AAG-C-A-C
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      25857 6 +     60454 AAG-C-A-C
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          1062 6 -     21101 AAG-C-A-C
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         58372 6 -    107033 AAG-C-A-C
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        1264 6 -     17608 AAG-C-A-C
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          28759 6 +     30494 AAG-C-A-C
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          57605 6 -     59240 AAG-C-A-C
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          1306 6 +     16677 AAG-C-A-C
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           23464 6 +     35983 AAG-C-A-C
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11989992 6 +  12117833 AAG-C-A-C
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46476750 6 +  46592721 AAG-C-A-C
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      40301 6 -     45581 AAG-C-A-C
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       1307 6 +     35577 AAG-C-A-C
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        1083 6 -     25661 AAG-C-A-C
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        1061 6 -     17744 AAG-C-A-C
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        20677 6 +     37128 AAG-C-A-C
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           1892 6 -      6963 CAG-T-T-C
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           58140 6 -     68416 AAG-C-A-C
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            7183 6 +     13308 AAG-C-A-C
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             4740 6 -     18223 AAA-C-A-C
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             21763 6 +     25473 AAA-C-A-C
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           40798 6 +     57117 AAA-C-A-C
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          45477 6 +     54541 AAA-C-A-C
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15960874 6 +  43084221 AA--CTT-C
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         70299 6 +    196370 AAA-C-A-C
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          14479 6 +     40510 AAA-C-A-C
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15138223 6 -  15256731 AAG-C-A-C
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      33270 6 -     53260 AAG-C-A-C
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101143834 6 + 101219884 AAG-C-A-C
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                15566 6 -     21363 CAG-T-A-C
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           760874 6 +    964067 CAG-T-A-C
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10885600 6 +  10971483 AAG-C-A-C
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147663764 6 + 156195979 AAG-C-A-C
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            15749 6 +     23629 AAG-C-A-C
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60611688 6 +  78930452 aat-t-a-c
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         38689 4 -     40477 AAG-T----
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 277654 6 -    399297 AA--T-TGA
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53028330 6 +  72327488 AA--T-TGA
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             18940 7 -     19186 AAA-C-ACT
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            51077 6 -     70449 AAG-T-A-C
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  207306 1 -    956709 A--------
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 29875 6 -     67205 AA--TTG-A
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                16883 6 +     26546 AA--TTG-T
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             57975 6 -    236241 AA--TTG-C
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          182730 6 -   6883506 TAG-T-T-C
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16843999 6 +  31942871 AAG-C-A-C
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80035902 6 -  96802777 AAG-G-A-C
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18697890 6 -  18957592 AAG-G-A-C
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 321596 6 +    993696 AAG-T-A-C
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   2248 6 +    151128 AAG-T-A-C
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dipodomys_ordii.KN672545.1                              3655271 6 +   4240102 GA--TAA-T
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 26904 6 +     28912 GA--TAA-T
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                35222 6 -     73477 TC--TTG-C
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Eidolon_helvum.KE772537.1                                 11253 6 +     24177 AAG-t-a-c
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1490561 6 +   1727528 AAA-T-A-C
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        238887 6 -    369425 AA--T-TGA
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           6000 6 -      7838 AA--T-TGA
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85871239 6 +  99434291 AAG-T-G-C
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4703276 6 +   6522550 AAG-T-A-C
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5852013 6 -   7175178 AAG-T-A-C
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13350516 6 +  41866177 AAG-T-A-C
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          12006 6 +     92910 AAG-T-A-C
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11531566 6 +  16010500 AAG-C-A-C
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48770401 6 -  48907691 AAG-C-A-C
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          314108 6 +    330699 AAG-G-A-C
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             60562 6 +     89355 AAG-G-A-C
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              4184 6 +     13586 AAG-C-A-C
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               4121 6 -      6809 AAG-C-A-C
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            10594 6 +     36558 AAG-C-A-C
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             6913 6 +     60246 AAG-C-A-C
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                10392 6 +    109717 AAG-C-A-C
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               14775 6 +     16540 AAG-C-A-C
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                15048 6 +     27497 AAG-C-A-C
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           17505 6 +     26808 AAG-C-A-C
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                32240 6 +     46535 AAG-C-A-C
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              14962 6 -     29447 AAG-C-A-C
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129892046 6 - 159252932 AAG-T-A-T
i Felis_catus.CM001386.2                                C 0 I 3
s Felis_catus_fca126.CM031420.1                         129279115 6 - 158578461 AAG-T-A-T
i Felis_catus_fca126.CM031420.1                         C 0 I 3
s Felis_nigripes.FelNig_flattened_line_8080                 20260 6 +     52776 AAG-T-A-T
i Felis_nigripes.FelNig_flattened_line_8080             C 0 I 3
s Galago_moholi.ctg555                                     210090 6 -    847004 AAG-C-A-C
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           12469 6 -     43889 AAG-C-A-C
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           9537 6 +     27357 AAG-C-A-C
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               155396 6 +    324696 AAG-G-A-T
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    180360 6 -    189561 AAA-T-A-C
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           12248 5 -     18683 A--TT-A-C
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               4466 6 -     14630 AAA-C-A-C
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119651565 6 - 195582420 AAA-C-A-C
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   76742 1 +    118900 --------C
i Graphiurus_murinus.GraMur_scaffold_4493               I 3 C 0
s Hapalemur_alaotrensis.k141_1280836                          985 6 +     10286 AAG-C-A-C
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_1254239                            9161 6 +      9690 AAG-C-A-T
i Hapalemur_gilberti.k141_1254239                       C 0 C 0
s Hapalemur_griseus.k141_1387522                             4790 6 +     56096 AAG-C-A-T
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        28040 6 -     42470 AAG-C-A-T
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        44664 6 -     54384 AAG-C-A-T
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              16283 6 +     53719 AAG-T-A-C
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                26558 6 -     91191 AAA-T-A-C
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2550207 6 +  31725842 AA--CTA-C
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               56643 6 +     73687 CAT-C-A-C
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              146183 6 +    277961 AAG-T-A-C
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      277472 6 -    477199 AAG-T-A-T
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              6631 6 -      9143 AAG-T-A-T
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      3872 6 -   7690867 AAA-C-A-C
i Hoolock_leuconedys.ctg79                                 C 0 I 11
s Hyaena_hyaena.HyaHya_flattened_line_20729                 16368 6 -     67322 AAA-T-A-C
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           18101 6 -    119109 AA--TTA-C
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              4298 6 +      5897 AAA-C-A-C
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_624065                               1162 6 +      2112 AAA-C-A-C
i Hylobates_agilis.k141_624065                          C 0 C 0
s Hylobates_klossii.k141_466549                             10738 6 +     11537 AAA-C-A-C
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14623843 6 -  25970782 AAA-C-A-C
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            1099 6 -      2977 AAA-C-A-C
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     5277 6 +     22540 AA--TTA-C
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7124998 6 +  13083262 GA-TT-A-T
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_4418183                                    604 6 -      1457 AAG-C-A-C
i Indri_indri.k141_4418183                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               8102 6 +     17520 AAG-G-A-C
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8564832 6 +  11848649 AG--TTT-C
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               22722 6 +     37189 AAG-G-A-C
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          49320 6 -    147782 AAA-C-A-C
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   113369 6 -    115756 AAG-T-A-C
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258406345 6 - 285822530 AAG-C-A-T
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        23095 6 +     39228 AAG-C-A-C
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            52470 6 +     63517 AAG-C-A-C
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        77720 6 +    116806 AAG-C-A-C
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     30734 6 -     33031 AAG-C-A-C
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3085044 6 -   3498232 AAG-T-A-C
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    12086 6 +     22452 AAG-T-A-T
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            135055 6 +   3060487 aag-G-A-C
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19247469 6 +  19376315 AAG-C-A-C
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            9852 6 +     84689 AAG-C-A-C
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3777601 6 +   6799190 AAG-C-A-C
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20591171 6 -  62548349 CAC-C-A-C
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11087023 6 +  39895028 NNN-N-N-N
i Lycaon_pictus.CM007556.1                              I 223 C 0
s Macaca_arctoides.k141_2201161                             19209 6 +     74745 AAG-C-A-C
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12705665 6 +  12821369 AAG-C-A-C
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                1310 6 -      3136 AAG-C-A-C
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           46127 6 +     63263 AAG-C-A-C
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                  830 6 -      2568 AAG-C-A-C
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 1416 6 -      7381 AAG-C-A-C
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  44634 6 -     79256 AAG-C-A-C
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196034742 6 + 196197964 AAG-C-A-C
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11444909 6 +  11645122 AAG-C-A-C
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   3581 6 -     46448 AAG-C-A-C
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                1253 6 -     13212 AAG-C-A-C
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 14933 6 -     55006 AAG-C-A-C
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43840051 6 +  43892939 AAG-C-A-C
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               16220 6 -     24607 AAG-C-A-C
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               3586 6 -     27140 AAG-C-A-C
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                700667 6 +    802869 AAA-T-A-C
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43436628 6 -  43563597 AAG-C-A-C
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4449454 6 -   4543643 AAG-C-A-C
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36872837 6 +  64221397 GA-TT-G-T
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       63475 4 -    234502 AAG-T----
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_146202            1839 6 -      1999 AAG-T-A-C
i Mellivora_capensis.MelCap_flattened_line_146202       C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               11835 6 +     15977 AG--T-TGA
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1046039 6 -  26018355 AA--T-TGA
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Microcebus_murinus.CM007691.1                          16509350 6 +  47401472 AAG-C-A-C
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               21765 6 -     32043 AAG-G-A-C
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22819180 6 -  98408828 AA--T-TGA
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8208760 6 +  10048721 AAG-T-A-C
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            33417 6 +     45743 AAG-T-A-C
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         1181 6 +     29742 AAG-C-A-C
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        10557 6 -    104932 AAG-T-A-C
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     4740 6 +      8497 AAG-C-A-C
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 145490 6 +    154973 AAG-G-A-C
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                160276 6 +    265003 AAG-T-A-C
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 3661 6 -      4346 AAA-T-A-C
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  143979 6 -    168139 AAG-T-A-C
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          18636 6 -    100666 AAG-T-A-C
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70765685 6 +  92629107 AA--T-TAA
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75488723 6 +  98207768 AA--T-TAA
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67554958 6 +  89017189 AA--T-TAA
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74329902 6 +  97876770 AA--T-TAA
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             10726 6 +     98495 aa-tt-a-c
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 I 36
s Mustela_putorius.JH417978.1                             4423418 6 -  28371801 AAG-T-A-C
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     89158 6 -    117718 AA--TTG-C
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               966931 6 +   8389877 AAG-T-A-C
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5018607 6 +   6462685 AAG-T-A-C
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3464511 6 -   3747815 AAG-T-A-C
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         9726 6 +     66751 AAG-T-A-C
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             4126 6 -      8794 TAG-T-A-C
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            117517 6 +    362372 AA--T-TGA
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               7683 6 +     48152 AAG-C-A-C
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4483949 6 -  14209539 ATG-T-A-C
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3950104 6 -   4490290 AAG-G-A-C
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  48380 6 +     94413 AAG-T-A-C
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_302224                            1140 6 +      1516 AAA-C-A-C
i Nomascus_annamensis.k141_302224                       C 0 C 0
s Nomascus_concolor.k141_226614                               400 6 -      5092 AAA-C-A-C
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_642452                            1183 6 +      2851 AAA-C-A-C
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_a.k141_595747                                  1821 6 +      4512 AAA-C-A-C
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                29828 6 +   3668941 AAG-T-A-C
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65566286 6 -  95554990 AAG-C-A-C
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            3015 6 +      6470 AAG-C-A-C
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65668624 6 +  89412551 AAG-C-A-C
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4995168 6 -  23139505 AAG-T-A-C
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3684699 6 +  10294119 AA--TTG-C
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             678613 6 -   3126709 AGG-T-A-C
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1078792 6 +   1425656 AAA-T-A-C
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         36086 6 +     78940 AAA-T-A-C
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  124437 6 +    145789 AA--T-TGA
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  36238 6 +     62360 AA--C-TGA
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7223787 6 -   7562323 AAG-G-A-C
i Orcinus_orca.KB316965.1                               C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141875105 6 + 163896628 AAG-T-A-T
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      307110 6 -    505867 AAG-T-A-C
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       38186 6 +     38679 AAG-C-A-C
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18007614 6 -  38779656 AAG-C-A-C
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134076352 6 - 275406953 AAA-T-A-C
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      77566 6 +    140051 AAA-T-A-C
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127573826 6 - 205426864 AAA-C-A-C
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.NBAG03000771.1                           179128 6 +    210065 AAG-C-A-C
i Pan_troglodytes.NBAG03000771.1                        I 61 I 1367
s Panthera_onca.PanOnc_flattened_line_1615                  33424 6 +    295523 AAG-T-A-T
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3637160 6 +  18214204 AAG-T-A-T
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5026819 6 -   6340057 AAG-T-A-T
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1065213 6 -   1292953 AAA-T-A-C
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188155419 6 - 188283584 AAG-C-A-C
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             3736 6 +      5367 AAG-C-A-C
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47512807 6 +  47705337 AAG-C-A-C
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 66785 6 -    104429 AAG-C-A-C
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    5317 6 +     14967 AAG-C-A-C
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 1178 6 -      7628 AAG-C-A-C
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    114852 6 -    135482 AAG-T-A-T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           4601 6 -     23713 AAG-C-A-C
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            23910 6 -     27972 AAG-C-A-C
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      42748 6 -     45160 GA--TGA-C
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4949470 6 -   8017169 AA--C-TGA
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    11636 6 -     36578 AA--TTA-C
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            120404 6 -    122454 AAG-G-A-C
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1987485                           1205 6 -      5908 AAG-C-A-C
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       1825 6 -     17985 AAG-C-A-C
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            1192 6 +      7694 AAG-C-A-C
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26739670 6 +  26888534 AAG-C-A-C
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            96576 6 +    112873 AAG-A-A-C
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             42802 6 -     61926 AAA-C-A-C
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        24233 6 +     78826 AAA-C-A-C
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              8182 6 -     15800 AAA-C-A-C
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        11380 6 -     16101 AAA-C-A-C
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          4689 6 +      9673 AAA-C-A-C
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13473685 6 -  19735023 AAA-C-A-C
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           12591 6 -     31692 AAA-C-A-C
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           4472 6 +     21690 AAG-G-A-C
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       22024 6 +     44506 AAA-C-A-C
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        22236 6 +     67491 AAA-C-A-C
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      12475 6 -     98129 AAA-C-A-C
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     22075 6 +    147771 AAA-C-A-C
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        22330 6 -     23762 AAA-C-A-C
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          2796 6 -     55515 AAA-C-A-C
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         22149 6 +    152463 AAA-C-A-C
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      8909 6 +      8943 AAA-C-A-C
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                         11871 6 +    134592 AAA-C-A-C
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          22459 6 -     75465 AAA-C-A-C
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              186351 6 -    373494 AAA-C-A-C
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19806999 6 +  19899266 AAA-C-A-C
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               4927 6 -     15069 AAG-C-A-C
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              5061 6 +     14865 AAG-C-A-C
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                76507 6 +     78963 CAT-C-A-C
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6847724 6 +  12164890 AAG-C-A-T
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    666945 6 -   2312742 AAG-C-A-C
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         2772 6 +     11805 AAG-C-A-C
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           42108 6 +     52369 AAG-C-A-T
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         34496 6 -     44753 AAG-C-A-T
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            16418 6 +     27322 AAG-C-A-T
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       16054 6 -     53241 AAG-C-A-C
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         38326 6 -     48185 AAG-C-A-C
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           33370 6 +     77221 AG--T-TGA
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            2944 6 -     27784 AAG-T-A-T
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        245727 6 -    344369 AAG-T-A-C
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13245054 6 -  17261082 AAG-T-G-C
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             603004 6 -   3946241 AAG-T-G-C
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131533404 6 - 161321710 AAG-T-A-T
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             29045 6 +     56732 AAG-C-A-C
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6805536 6 +   6970761 AAG-C-A-C
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             4930 6 +     18040 AAG-C-A-C
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                14869 6 +     68503 AAA-T-A-C
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13914657 6 +  90463843 AG--T-TGA
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1786873 6 +   2252614 AAG-T-A-C
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_1391695                           1158 6 -      1866 AAG-C-A-C
i Rhinopithecus_bieti.k119_1391695                      C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206376815 6 - 206558726 AAG-C-A-C
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44855715 6 -  45163003 AAG-C-A-C
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                18344 6 +    109198 AAA-T-A-C
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       6669 6 +     12214 AAA-T-A-C
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15671889 6 -  43202129 AAA-C-A-C
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        3806 6 +     34089 AAA-C-A-C
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              3747 6 -     60842 AAA-C-A-C
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              3842 6 +     67014 AAA-C-A-C
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              3820 6 +     60816 AAA-C-A-C
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 3757 6 -     76454 AAA-C-A-C
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17340483 6 -  30362882 AAA-C-A-C
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         19842 6 -     62485 AAA-C-A-C
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   30431 6 -    114521 AAT-T-A-C
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        2542 6 +     15331 AAG-C-A-C
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       7939 6 +     20762 AAG-C-A-C
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         117937 6 +    130994 AAG-C-A-C
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           36728 6 +     46263 AAG-C-A-C
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     29842 6 +     42640 AAG-C-A-C
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        12886 6 +     30600 AAG-C-A-C
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   99436 6 -    120886 AG--T-TTA
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            17050 6 +    739146 TGG-A-A-T
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17750721 7 -  27805282 AGG-T-ACT
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2238918 6 +   2842873 GA-TT-G-T
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             233853 6 -    276980 AAG-T-A-C
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            26643 6 +     62062 AAC-T-A-C
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189270934 6 + 218635234 AGG-T-A-C
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        14100 6 -  13920577 AAA-C-A-C
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               5102 6 -      6213 AAG-T-A-C
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               13802 6 +     45698 TAG-T-A-C
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      805805 6 +   1148477 AAG-T-C-C
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  56462 6 +     99546 AAG-T-A-C
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               25624 6 +     42269 AAG-A-A-C
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               58940 6 +     65473 AAG-A-A-C
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194006946 6 - 194193292 AAG-C-A-C
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             38450 6 -     47444 AA--TTA-C
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  4663 6 +      6782 CAG-T-T-C
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  134950 6 -    259118 AAG-G-A-C
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        26049 6 +     38948 AAG-C-A-C
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   19776 6 -     32910 AAG-C-A-C
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      1163 6 -     12939 AAG-C-A-C
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       1098 6 -     14244 AAG-C-A-C
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           42496 6 -     54611 AAG-C-A-C
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                         302 6 -     11566 AAG-C-A-C
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     2474 6 -     15592 AAG-C-A-C
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          1131 6 +     14371 AAG-C-A-C
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  50883 6 +     51589 AAG-C-A-C
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       14064 6 +     14732 AAG-C-A-C
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       4536 6 -     28054 AAG-C-A-C
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44659336 6 -  44834318 AAG-C-A-C
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       1639 6 +     13828 AAG-C-A-C
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   4246 6 +     90398 ACA-T-A-C
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16081634 6 +  31416278 CAT-C-A-C
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69312504 6 -  96451834 AAG-G-A-C
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_139357                   957 6 +      2103 AAT-A-A-C
i Uropsilus_gracilis.UroGra_scaffold_139357             C 0 C 0
s Ursus_maritimus.KK498671.1                              6513860 6 +  28682327 AAA-T-A-C
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  4430 6 -     20643 AAG-C-A-T
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             23971 6 -     33872 AAG-C-A-T
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1523743 6 -   2331223 AAC-T-A-C
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                137207 6 -    281493 AAG-T-A-C
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       126022 6 -    134049 GG-TT-G-T
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        213339 6 -    227762 AGG-T-A-C
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           5999 6 -      8775 AAG-G-A-C
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Dinomys_branickii.DinBra_scaffold_1996                   156356 54 +    228994 I
e Orycteropus_afer.OryAfe_flattened_line_13509              43378 16 -     66828 I
e Microgale_talazaci.MicTal_scaffold_34660                  30638 409 -     48017 I
e Manis_pentadactyla.KN017078.1                             35015 87 +     58827 I
e Manis_javanica.JSZB01003966.1                            144940 87 +    252755 I
e Elephantulus_edwardii.JH947210.1                        7804622 10712 +  15467074 I
e Echinops_telfairi.JH980316.1                           22994192 422 -  44670279 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     14107 296 -     20485 I
e Hylobates_pileatus_a.tarseq_592                             33311 5 -     60944 I
e Tupaia_tana.TupTan_flattened_line_68454                    4094 206 +     13056 I
e Tupaia_chinensis.KB320831.1                             2791839 261 -   3938065 I
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I
e Nomascus_siki_b.tarseq_80                             24175 0 -  18771707 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               11092 11 +    209709 AC--ATAG-----A-A-A-------------------AG
s Acinonyx_jubatus.LLWD01000356.1                         2033073 11 +   3721120 AT--ATAG-----A-A-A-------------------GG
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    111737 11 -    189883 GC--ATAT-----G-A-A-------------------GG
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 2 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10656390 11 +  23371972 AT--ATCG-----A-A-A-------------------GT
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7093535  7 -  16596857 AT--GGAG-----A-------------------------
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   12107 11 -     22067 AC--ATAG-----G-A-A-------------------CA
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                    443 11 -     60446 AC--ATAG-----A-A-A-------------------GG
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         1164 11 -     29318 AC--ATAG-----A-A-A-------------------GG
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                          101 11 +     38766 AC--ATAG-----A-A-A-------------------GG
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          1058 11 -     80423 AC--ATAG-----A-A-A-------------------GG
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             9357 11 -     18050 AC--ATAG-----A-A-A-------------------GG
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                 10447 11 -     11521 AC--ATAG-----A-A-A-------------------GG
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                             10034 11 -     21359 AC--ATAG-----A-A-A-------------------GG
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_298055                                 1328 11 +      1823 AC--ATAG-----A-A-A-------------------GG
i Alouatta_juara.k141_298055                            C 0 C 0
s Alouatta_macconnelli.k141_1331706                          9330 11 -     10438 AC--ATAG-----A-A-A-------------------GG
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            5986 11 +      7047 AC--ATAG-----A-A-A-------------------GG
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             9266 11 +     10410 AC--ATAG-----A-A-A-------------------GG
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            3074 11 -      4927 AC--ATAG-----A-A-A-------------------GG
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             6003 11 +      6429 AC--ATAG-----A-A-A-------------------GG
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3519216 11 +   4113121 AC--TTAG-----A-A-A-------------------AG
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      389386 11 -    631301 AC--ATAG-----A-A-G-------------------GG
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            29798 11 +     33004 AA--TTAG-----A-A-A-------------------AG
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 61716 11 +     78111 AC--ATAG-----A-A-A-------------------GA
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            4657 11 +     22701 AC--ATAG-----A-A-A-------------------GG
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5748614 11 +   9889416 AC--ATAG-----A-A-A-------------------GG
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             5199 11 -    104377 AC--ATAG-----A-A-A-------------------GA
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               5205  7 +     23246 AC--ATAG-----A-------------------------
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     2861 11 +      5067 AT--GCAT-----A-A-A-------------------AA
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_587554                         213 11 +      9265 AC--ATAG-----G-A-A-------------------GG
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 7789 11 -     29036 AC--AGAG-----A-A-G-------------------TG
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9538462 11 +  39197703 AC--ATAG-----A-A-A-------------------GG
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             59733 11 +     85812 AC--ATAG-----A-A-A-------------------GG
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                10745 11 +     89302 AC--ATAG-----A-A-A-------------------GG
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             15250 11 -     58268 AC--ATAG-----A-A-A-------------------GG
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             63241 11 +    119057 AC--ATAG-----A-A-A-------------------GG
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               5210 11 -     25888 AC--ATAG-----A-A-A-------------------GG
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 5849 11 -     16375 CC--ATAG-----G-A-A-------------------GG
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              2169 11 +      2719 CC--ATAG-----G-A-A-------------------GG
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26379230 11 +  51448160 AC--ACAG-----A-A-A-------------------GG
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        4461 11 -     13118 AC--ACAG-----G-A-A-------------------GG
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   42279 11 -     72089 AC--TTAG-----A-A-A-------------------AG
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6558590 11 +   6870073 AC--TTAG-----A-A-A-------------------AG
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138138816 11 - 161108492 AC--TTAG-----A-A-A-------------------AG
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     571268 11 -    998990 AC--TTAG-----A-A-A-------------------AG
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136294549 11 - 158972876 AC--TTAG-----A-A-A-------------------AG
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1230315 11 -   1914593 AC--TTAG-----A-A-A-------------------AG
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               113103 11 -    171031 AT--ATAG-----A-A-A-------------------GG
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 12131 11 +    125063 AT--ATAG-----A-A-A-------------------GG
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                14176 11 -    216513 AT--ATAG-----A-A-A-------------------GG
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        6716 11 -    134917 AT--ATAG-----A-A-A-------------------GG
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3218640 12 -   8989139 AC--AGAG-----A-AAA-------------------GG
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           396345 12 -  15254737 AC--AGAG-----A-AAA-------------------GG
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2972078 12 +   6889770 AC--AGAG-----A-AAA-------------------GG
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11518373 11 +  39901454 AT--GTAG-----A-A-A-------------------GG
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   13397 11 +     87036 AT--GTAG-----A-A-A-------------------GG
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11265040 11 -  35597290 at--gtag-----a-a-a-------------------gg
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11087573 11 +  39895921 at--gtag-----a-a-a-------------------gg
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16454589 11 -  44759192 at--gtag-----a-a-a-------------------gg
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21324292 11 + 157394656 AC--TTAG-----A-A-A-------------------AG
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135705519 11 - 157403528 AC--TTAG-----A-A-A-------------------AG
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_979108                  1103 11 -      1248 AC--ATAG-----C-A-A-------------------GG
i Capromys_pilorides.CapPil_scaffold_979108             C 0 I 1
s Carlito_syrichta.NW_007248099.1                          308146 10 +    345090 -T--ATAG-----G-A-A-------------------TT
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               58587 11 +     67245 AC--ATAG-----A-A-G-------------------GG
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   29796 11 +     33760 AC--TTAG-----G-A-A-------------------GA
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   157852 11 -    276539 AC--ATAG-----A-A-A-------------------GG
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15785733 11 -  24422027 AC--ACAG-----G-A-A-------------------GA
i Cavia_aperea.AVPZ01000278.1                           C 0 I 1
s Cavia_porcellus.DS562889.1                             15797667 11 -  24440124 AC--ACAA-----G-A-A-------------------GA
i Cavia_porcellus.DS562889.1                            C 0 I 1
s Cavia_tschudii.CavTsc_scaffold_488                       175858 11 +    436027 AC--ACAA-----G-A-A-------------------GA
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 I 1
s Cebus_albifrons.Contig22                               18889946 11 -  29618158 AT--ATAG-----A-A-A-------------------GG
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 7490 11 -     26817 AC--ATAG-----A-A-A-------------------GG
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                11730 11 +     25043 AC--ATAG-----A-A-A-------------------GG
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         7179 10 +     21754 -T--ATAG-----G-A-A-------------------TT
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4362955 11 +   7569818 AC--ATGA-----A-A-G-------------------GG
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         2707 11 -      9338 AC--ATGA-----A-A-G-------------------GG
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6554386 11 +   6739814 AC--ATAG-----A-A-A-------------------GG
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      25863 11 +     60454 AC--ATAG-----A-A-A-------------------GG
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          1068 11 -     21101 AC--ATAG-----A-A-A-------------------GG
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         58378 11 -    107033 AC--ATAG-----A-A-A-------------------GG
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        1270 11 -     17608 AC--ATAG-----A-A-A-------------------GG
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          28765 11 +     30494 AC--ATAG-----A-A-A-------------------GG
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          57611 11 -     59240 AC--ATAG-----A-A-A-------------------GG
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          1312 11 +     16677 AC--ATAG-----A-A-A-------------------GG
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           23470 11 +     35983 AC--ATAG-----A-A-A-------------------GG
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11989998 11 +  12117833 AC--ATAG-----A-A-A-------------------GG
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46476756 11 +  46592721 AC--ATAG-----A-A-A-------------------GG
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      40307 11 -     45581 AC--ATAG-----A-A-A-------------------GG
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       1313 11 +     35577 AC--ATAG-----A-A-A-------------------GG
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        1089 11 -     25661 AC--ATAG-----A-A-A-------------------GG
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        1067 11 -     17744 AC--ATAG-----A-A-A-------------------GG
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        20683 11 +     37128 AC--ATAG-----A-A-A-------------------GG
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           1898 11 -      6963 AC--ATAG-----G-A-A-------------------GG
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           58146 11 -     68416 AC--ATAG-----G-A-G-------------------GG
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            7189 11 +     13308 AC--ATAG-----G-A-G-------------------GG
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             4746 11 -     18223 AC--ATAG-----A-A-A-------------------GG
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             21769 11 +     25473 AC--ATAG-----A-A-A-------------------GG
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           40804 11 +     57117 AC--ATAG-----A-A-A-------------------GG
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          45483 11 +     54541 AC--ATAG-----A-A-A-------------------GG
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15960880 11 +  43084221 AC--ATTG-----G-A-A-------------------GG
i Chinchilla_lanigera.JH721867.1                        C 0 I 1
s Chiropotes_israelita.k141_1189915                         70305 11 +    196370 AC--ATAG-----A-A-A-------------------GG
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          14485 11 +     40510 AC--ATAG-----A-A-A-------------------GG
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15138229 11 -  15256731 AC--ATAG-----A-A-A-------------------GG
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      33276 11 -     53260 AC--ATAG-----A-A-A-------------------GG
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101143840 11 + 101219884 AC--ATAG-----A-A-A-------------------GG
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                15572 11 -     21363 AC--ATAG-----A-A-A-------------------GG
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           760880 11 +    964067 AC--ATAG-----G-A-A-------------------GG
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10885606 11 +  10971483 AC--ATAG-----A-A-A-------------------GG
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147663770 11 + 156195979 AC--ATAG-----A-A-A-------------------GG
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            15755 11 +     23629 AC--ATAG-----A-A-A-------------------GG
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60611694 11 +  78930452 ac--aatg-----a-a-a-------------------ta
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         38693 18 -     40477 ACACATATTAATAG-A-A-------------------AA
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 277660 11 -    399297 AC--ATAT-----G-A-A-------------------GG
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53028336 11 +  72327488 AC--ATAT-----G-A-A-------------------GG
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             18947 11 -     19186 AC--ATTG-----A-A-G-------------------GT
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            51083 11 -     70449 AT--TTAG-----A-A-A-------------------GG
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 29881 11 -     67205 AC--ATAG-----C-A-A-------------------GG
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 I 1
s Cuniculus_paca.CunPac_flattened_line_16637                16889 11 +     26546 AC--ATAA-----G-A-A-------------------GA
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 I 1
s Dasyprocta_punctata.DasPun_flattened_line_634             57981 11 -    236241 AC--ATAG-----G-A-A-------------------GA
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 I 1
s Dasypus_novemcinctus.JH568778.1                          182736 11 -   6883506 AC--ACAG-----G-A-A-------------------AA
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16844005 11 +  31942871 AC--ATAG-----G-A-A-------------------GG
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80035908 11 -  96802777 AC--ACAG-----A-A-A-------------------GG
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18697896 11 -  18957592 AC--ATAG-----A-A-G-------------------GA
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 321602 11 +    993696 AC--ATGA-----A-A-G-------------------GG
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   2254 11 +    151128 AC--ATGA-----A-A-G-------------------GG
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dipodomys_ordii.KN672545.1                              3655277  7 +   4240102 AC--TTAG-----G-------------------------
i Dipodomys_ordii.KN672545.1                            C 0 I 3
s Dipodomys_stephensi.DipSte_scaffold_44365                 26910  7 +     28912 AC--TTAG-----G-------------------------
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 I 3
s Dolichotis_patagonum.DolPat_scaffold_14102                35228 11 -     73477 AC--ATAG-----G-A-A-------------------GA
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 I 1
s Eidolon_helvum.KE772537.1                                 11259 11 +     24177 at--atag-----a-a-a-------------------ga
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1490567 11 +   1727528 AC--TTAG-----A-A-A-------------------AG
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        238893 11 -    369425 AC--ATAT-----G-A-C-------------------AG
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           6006 11 -      7838 AC--ATAT-----G-A-C-------------------GG
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85871245  7 +  99434291 AT--GTAG-----A-------------------------
i Enhydra_lutris.KZ291749.1                             C 0 I 24
s Eptesicus_fuscus.JH977687.1                             4703282 11 +   6522550 ac--atag-----a-a-a-------------------ga
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5852019 11 -   7175178 AC--ATCG-----A-A-A-------------------GA
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13350522 11 +  41866177 AC--ATCA-----A-A-A-------------------GA
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          12012 11 +     92910 AC--ATCA-----A-A-A-------------------GA
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11531572 11 +  16010500 AC--ATTG-----A-G-T-------------------GG
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48770407 11 -  48907691 AC--ATAG-----A-A-A-------------------GG
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          314114 11 +    330699 AC--ACAG-----A-A-A-------------------GG
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             60568 11 +     89355 AC--ACAG-----A-A-A-------------------GG
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              4190 11 +     13586 TC--ATAG-----G-A-A-------------------GG
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               4127 11 -      6809 GC--ATAG-----G-A-A-------------------GG
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            10600 11 +     36558 GC--ATAG-----G-A-A-------------------GG
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             6919 11 +     60246 GC--ATAG-----G-A-A-------------------GG
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                10398 11 +    109717 GT--ATAG-----G-A-A-------------------GG
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               14781 11 +     16540 GC--ATAG-----G-A-A-------------------GG
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                15054 11 +     27497 GC--ATAG-----G-A-A-------------------GG
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           17511 11 +     26808 GC--ATAG-----G-A-A-------------------GG
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                32246 11 +     46535 TC--ATAG-----G-A-A-------------------GG
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              14968 11 -     29447 GC--ATAG-----G-A-A-------------------GG
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129892055  4 - 159252932 ---------------A-A-------------------GG
i Felis_catus.CM001386.2                                I 3 C 0
s Felis_catus_fca126.CM031420.1                         129279124  4 - 158578461 ---------------A-A-------------------AG
i Felis_catus_fca126.CM031420.1                         I 3 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 20269  4 +     52776 ---------------A-A-------------------GG
i Felis_nigripes.FelNig_flattened_line_8080             I 3 C 0
s Galago_moholi.ctg555                                     210096 11 -    847004 AC--ATAG-----G-A-A-------------------GG
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           12475 11 -     43889 AC--ATAG-----G-A-A-------------------GG
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           9543 11 +     27357 AC--ATAG-----G-A-A-------------------GG
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               155402 11 +    324696 AC--ATAG-----A-A-A-------------------GG
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    180366 11 -    189561 AC--TTAG-----A-A-A-------------------AG
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           12253 11 -     18683 AT--ATAG-----A-A-A-------------------GA
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               4472 11 -     14630 AC--ATAG-----A-A-A-------------------GG
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119651571 11 - 195582420 AC--ATAG-----A-A-A-------------------GG
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   76743 11 +    118900 AC--ACAA-----A-A-A-------------------GA
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                          991 11 +     10286 GC--ATAG-----G-A-A-------------------GG
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_1254239                            9167 11 +      9690 GC--ATAG-----G-A-A-------------------GG
i Hapalemur_gilberti.k141_1254239                       C 0 C 0
s Hapalemur_griseus.k141_1387522                             4796 11 +     56096 GC--ATAG-----G-A-A-------------------GG
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        28046 11 -     42470 GC--ATAG-----G-A-A-------------------GG
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        44670 11 -     54384 GC--ATAG-----G-A-A-------------------GG
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              16289 11 +     53719 AT--ATAG-----T-A-A-------------------GG
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                26564 11 -     91191 AC--TTAG-----A-A-A-------------------AG
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2550213 11 +  31725842 AC--ATAG-----G-A-A-------------------GG
i Heterocephalus_glaber.JH602058.1                      C 0 I 1
s Heterohyrax_brucei.HetBruBak_scaffold_25354               56649 11 +     73687 TC--ATAG-----T-A-A-------------------GG
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              146189 11 +    277961 AC--ATAG-----A-A-A-------------------GG
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      277478 11 -    477199 AC--TTAG-----A-A-A-------------------AG
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              6637 11 -      9143 AC--ATAG-----A-A-A-------------------AG
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg903                                     5608 12 -     61166 AC--ATAG-----A-A-AA------------------GG
i Hoolock_leuconedys.ctg903                                I 243 I 4216
s Hyaena_hyaena.HyaHya_flattened_line_20729                 16374 11 -     67322 AT--AAAG-----A-A-A-------------------AG
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           18107 11 -    119109 AC--GTAG-----G-A-A-------------------GA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 I 1
s Hylobates_abbotti.k141_493872                              4304 11 +      5897 AC--ATAG-----A-A-A-------------------GG
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_624065                               1168 11 +      2112 AC--ATAG-----A-A-A-------------------GG
i Hylobates_agilis.k141_624065                          C 0 C 0
s Hylobates_klossii.k141_466549                             10744 11 +     11537 AC--ATAG-----A-A-A-------------------GG
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14623849 11 -  25970782 AC--ATAG-----A-A-A-------------------GG
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            1105 11 -      2977 AC--ATAG-----A-A-A-------------------GG
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     5283 11 +     22540 AC--ATAG-----G-A-A-------------------GG
i Hystrix_cristata.HysCri_scaffold_50788                C 0 I 1
s Ictidomys_tridecemlineatus.JH393315.1                   7125004 11 +  13083262 AC--ACAG-----G-A-A-------------------GA
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_4418183                                    610 11 -      1457 GC--ATAG-----G-A-A-------------------GG
i Indri_indri.k141_4418183                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               8108 11 +     17520 AC--ACAG-----A-A-A-------------------GG
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8564838 30 +  11848649 TC--TTAG-----G-A-AATAGAAATAGGATCCATGTCA
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               22728 11 +     37189 AC--ACAG-----A-A-A-------------------GG
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          49326 11 -    147782 AC--ATAG-----A-A-A-------------------GG
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   113375 11 -    115756 AC--ATAG-----A-A-A-------------------GA
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258406351 11 - 285822530 GC--ATAG-----G-A-A-------------------GG
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        23101 11 +     39228 CC--ATAG-----G-A-A-------------------GG
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            52476 11 +     63517 GC--ATAG-----G-A-A-------------------GG
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        77726 11 +    116806 AC--ATAG-----G-A-A-------------------GG
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     30740 11 -     33031 CC--ATAG-----G-A-A-------------------GG
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3085050  9 -   3498232 AT--GTAG-----AAA-----------------------
i Leptonychotes_weddellii.KB714749.1                    C 0 I 2
s Lepus_americanus.LepAme_scaffold_62849                    12092 11 +     22452 AT--ATTA-----C-A-T-------------------GG
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            135061 11 +   3060487 AC--ACAG-----A-A-A-------------------GG
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19247475 11 +  19376315 AC--ATAG-----A-A-A-------------------GG
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            9858 11 +     84689 AC--ATAA-----G-A-A-------------------GG
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3777607 11 +   6799190 AC--ATAA-----G-A-A-------------------GG
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20591177 11 -  62548349 AC--ATAA-----A-A-A-------------------GG
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11087029 11 +  39895028 NN--NNNN-----N-N-N-------------------NN
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             19215 11 +     74745 AC--ATAG-----A-A-A-------------------GG
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12705671 11 +  12821369 AC--ATAG-----A-A-A-------------------GG
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                1316 11 -      3136 AC--ATAG-----A-A-A-------------------GG
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           46133 11 +     63263 AC--ATAG-----A-A-A-------------------GG
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                  836 11 -      2568 AC--ATAG-----A-A-A-------------------GG
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 1422 12 -      7381 AC--ATAG-----A-A-A---G---------------GG
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  44640 11 -     79256 AC--ATAG-----A-A-A-------------------GG
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196034748 11 + 196197964 AC--ATAG-----A-A-A-------------------GG
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11444915 12 +  11645122 AC--ATAG-----A-A-A---G---------------GG
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   3587 11 -     46448 AC--ATAG-----A-A-A-------------------GG
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                1259 11 -     13212 AC--ATAG-----A-A-A-------------------GG
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 14939 12 -     55006 AC--ATAG-----A-A-A---G---------------GG
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43840057 12 +  43892939 AC--ATAG-----A-A-A---G---------------GG
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               16226 11 -     24607 AC--ATAG-----A-A-A-------------------GG
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               3592 11 -     27140 AC--ATAG-----A-A-A-------------------GG
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                700673 11 +    802869 AC--ATAG-----A-A-A-------------------GA
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43436634 11 -  43563597 AC--ATAG-----A-A-A-------------------GG
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4449460 11 -   4543643 AC--ATAG-----A-A-A-------------------GG
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36872843 11 +  64221397 AC--ACAG-----G-A-A-------------------GA
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       63479 11 -    234502 AC--GGGG-----A-A-A-------------------GG
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_146202            1845  7 -      1999 AT--GTAG-----A-------------------------
i Mellivora_capensis.MelCap_flattened_line_146202       C 0 N 0
s Meriones_unguiculatus.MerUng_scaffold_52233               11841 11 +     15977 GC--ATAT-----G-A-A-------------------GG
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1046045 11 -  26018355 AC--ATAT-----G-A-A-------------------GG
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Microcebus_murinus.CM007691.1                          16509356 11 +  47401472 AC--ATAG-----G-A-A-------------------GG
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               21771 11 -     32043 AC--ATAG-----A-A-G-------------------AG
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22819186 11 -  98408828 AC--ATAT-----G-A-C-------------------AG
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8208766 11 +  10048721 AC--ATAG-----A-A-A-------------------GG
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            33423 11 +     45743 AC--ATAG-----A-A-A-------------------GG
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         1187 11 +     29742 AC--ATAG-----A-A-A-------------------GG
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        10563  9 -    104932 AT--GTAG-----AAA-----------------------
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 I 2
s Mirza_zaza.k141_226143                                     4746 11 +      8497 AC--ATAG-----G-A-A-------------------GG
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 145496 11 +    154973 AC--ACAG-----A-A-A-------------------GG
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                160282 11 +    265003 AC--ATAG-----A-A-A-------------------GG
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 3667 11 -      4346 AC--TTAG-----A-A-A-------------------AG
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  143985 11 -    168139 AT--ATAG-----A-A-A-------------------GG
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          18642 11 -    100666 AC--AGAG-----A-A-G-------------------GA
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70765691 11 +  92629107 AC--ATAT-----G-A-A-------------------GG
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75488729 11 +  98207768 AC--ATAT-----G-A-A-------------------GG
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67554964 11 +  89017189 AC--ATAT-----G-A-A-------------------GG
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74329908 11 +  97876770 GC--ATAT-----G-A-A-------------------GA
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             10768 11 +     98495 ac--acac-----a-c-a-------------------aa
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 36 C 0
s Mustela_putorius.JH417978.1                             4423424  7 -  28371801 AT--GTAG-----A-------------------------
i Mustela_putorius.JH417978.1                           C 0 I 24
s Myocastor_coypus.MyoCoy_scaffold_3653                     89164 11 -    117718 AC--ACAG-----C-A-A-------------------GG
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 I 1
s Myotis_brandtii.KE161952.1                               966937 11 +   8389877 AC--ATAG-----A-A-A-------------------GA
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5018613 11 +   6462685 AC--ATAG-----A-A-A-------------------GA
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3464517 11 -   3747815 ac--atag-----a-a-a-------------------ga
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         9732 11 +     66751 AC--ATAG-----A-A-A-------------------GA
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             4132 13 -      8794 ATAAATAA-----G-A-A-------------------GG
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            117523 11 +    362372 AC--ACAT-----G-A-A-------------------GA
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               7689 11 +     48152 AC--ATAG-----A-A-A-------------------GG
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4483955  9 -  14209539 AT--GTAG-----AAA-----------------------
i Neomonachus_schauinslandi.NINY01007774.1              C 0 I 2
s Neophocaena_asiaeorientalis.KZ688543.1                  3950110 11 -   4490290 AC--ACAG-----A-A-A-------------------GG
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  48386 10 +     94413 AC--ATAG-----A-A-G--------------------G
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_302224                            1146 11 +      1516 AC--ATAG-----A-A-A-------------------GG
i Nomascus_annamensis.k141_302224                       C 0 C 0
s Nomascus_concolor.k141_226614                               406 11 -      5092 AC--ATAC-----A-A-A-------------------GG
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_642452                            1189 11 +      2851 AC--ATAG-----A-A-A-------------------GG
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_a.k141_595747                                  1827 11 +      4512 AC--ATAG-----A-A-A-------------------GG
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                29834 11 +   3668941 AT--GTAG-----A-a-a-------------------gg
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65566292 11 -  95554990 AC--GTAG-----G-A-A-------------------GG
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            3021 11 +      6470 AC--ATAG-----G-A-A-------------------GG
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65668630 11 +  89412551 AC--ATAG-----G-A-A-------------------GG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4995174 11 -  23139505 AC--ATTA-----G-A-A-------------------GG
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3684705 11 +  10294119 AC--ATAG-----C-A-A-------------------GG
i Octodon_degus.JH651621.1                              C 0 I 1
s Odobenus_rosmarus.KB229369.1                             678619  8 -   3126709 AT--GTAG-----A-A-----------------------
i Odobenus_rosmarus.KB229369.1                          C 0 I 2
s Odocoileus_virginianus.KZ101650.1                       1078798 11 +   1425656 AC--TTAG-----A-C-A-------------------AG
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         36092 11 +     78940 AC--TTAG-----A-A-A-------------------AT
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  124443 11 +    145789 AC--ATAT-----G-A-C-------------------GG
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  36244 11 +     62360 AC--ATAC-----G-C-G-------------------GG
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7223793 11 -   7562323 AC--ACAG-----A-A-A-------------------GG
i Orcinus_orca.KB316965.1                               C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141875111 11 + 163896628 AT--ATTA-----C-A-T-------------------GC
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      307116 11 -    505867 AT--GTAG-----A-A-a-------------------gg
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       38192 11 +     38679 AC--ATAG-----G-A-A-------------------GG
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18007620 11 -  38779656 AC--ATAG-----G-A-A-------------------GG
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134076358 11 - 275406953 AC--TTAG-----A-A-A-------------------AG
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      77572 11 +    140051 AC--TTAG-----A-A-A-------------------AG
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127573832 11 - 205426864 AC--ATAG-----A-A-A-------------------GG
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120150985 11 - 196562556 AC--ATAG-----A-A-A-------------------GG
i Pan_troglodytes.CM009241.2                            I 6 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  33430 11 +    295523 AT--ATAG-----A-A-A-------------------GG
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3637166 11 +  18214204 AT--ATAG-----A-A-A-------------------GG
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5026825 11 -   6340057 AT--ATAG-----A-A-A-------------------GG
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1065219 11 -   1292953 AC--TTAG-----A-A-A-------------------AG
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188155425 11 - 188283584 AC--ATAG-----A-A-A-------------------GG
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             3742 11 +      5367 AC--ATAG-----A-A-A-------------------GG
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47512813 11 +  47705337 AC--ATAG-----A-A-A-------------------GG
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 66791 11 -    104429 AC--ATAG-----A-A-A-------------------GG
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    5323 11 +     14967 AC--ATAG-----A-A-A-------------------GG
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 1184 11 -      7628 AC--ATAG-----A-A-A-------------------GG
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    114858 11 -    135482 GT--ATAG-----A-A-A-------------------AG
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           4607 11 -     23713 AC--ATAG-----G-A-A-------------------GG
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            23916 11 -     27972 AC--ATAG-----G-A-A-------------------GG
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      42754  7 -     45160 AC--ATAG-----A-------------------------
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 I 3
s Peromyscus_maniculatus.KI615518.1                       4949476 11 -   8017169 AC--ATAC-----G-C-A-------------------GG
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    11642 11 -     36578 AC--ATCA-----G-A-A-------------------GA
i Petromus_typicus.PetTyp_scaffold_33007                C 0 I 1
s Phocoena_phocoena.PhoPho_flattened_line_11948            120410 11 -    122454 AC--ACAG-----A-A-A-------------------GG
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1987485                           1211 11 -      5908 AC--ATAG-----A-A-A-------------------GG
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       1831 11 -     17985 AC--ATAG-----A-A-A-------------------GG
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            1198 11 +      7694 AC--ATAG-----A-A-A-------------------GG
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26739676 11 +  26888534 AC--ATAG-----A-A-A-------------------GG
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            96582 11 +    112873 AC--ATAG-----A-A-A-------------------GC
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             42808 11 -     61926 AC--ATAG-----A-A-A-------------------GG
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        24239 11 +     78826 AC--ATAG-----A-A-A-------------------GG
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              8188 11 -     15800 AC--ATAG-----A-A-A-------------------GG
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        11386 11 -     16101 AC--ATAG-----A-A-A-------------------GG
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          4695 11 +      9673 AC--ATAG-----A-A-A-------------------GG
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13473691 11 -  19735023 AC--ATAG-----A-A-A-------------------GG
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           12597 11 -     31692 AC--ATAG-----A-A-A-------------------GG
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           4478 11 +     21690 AC--ACAG-----A-A-A-------------------GG
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       22030 11 +     44506 AC--ATAG-----A-A-A-------------------GG
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        22242 11 +     67491 AC--ATAG-----A-A-A-------------------GG
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      12481 11 -     98129 AC--ATAG-----A-A-A-------------------GG
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     22081 11 +    147771 AC--ATAG-----A-A-A-------------------GG
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        22336 11 -     23762 AC--ATAG-----A-A-A-------------------GG
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          2802 11 -     55515 AC--ATAG-----A-A-A-------------------GG
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         22155 11 +    152463 AC--ATAG-----A-A-A-------------------GG
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      8915  9 +      8943 A----TAG-----A-A-A-------------------GG
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                         11877 11 +    134592 AC--ATAG-----A-A-A-------------------GG
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          22465 11 -     75465 AC--ATAG-----A-A-A-------------------GG
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              186357 11 -    373494 AC--ATAG-----A-A-A-------------------GG
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19807005 11 +  19899266 AC--ATAG-----A-A-A-------------------GG
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               4933 11 -     15069 AC--ATAG-----A-A-A-------------------GG
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              5067 11 +     14865 AC--ATAG-----A-A-A-------------------GG
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                76513 11 +     78963 TC--ATAG-----T-A-A-------------------GG
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6847730 11 +  12164890 GC--ATAG-----G-A-A-------------------GG
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    666951 11 -   2312742 CC--ATAG-----G-A-A-------------------GG
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         2778 11 +     11805 CC--ATAG-----G-A-A-------------------GG
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           42114 11 +     52369 CC--ATAG-----G-A-A-------------------GG
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         34502 11 -     44753 CC--ATAG-----G-A-A-------------------GG
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            16424 11 +     27322 CC--ATAG-----G-A-A-------------------GG
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       16060 11 -     53241 CC--ATAG-----G-A-A-------------------GG
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         38332 11 -     48185 CC--ATAG-----G-A-A-------------------GG
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           33376 11 +     77221 GC--ATAT-----G-A-A-------------------GG
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            2950 11 -     27784 AC--GTAG-----A-A-A-------------------GG
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        245733  7 -    344369 AT--GTAG-----A-------------------------
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 I 24
s Pteropus_alecto.KB031157.1                             13245060 11 -  17261082 ac--atag-----a-a-a-------------------ga
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             603010 11 -   3946241 ac--atag-----a-a-a-------------------ga
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131533410 11 - 161321710 AT--ATAG-----A-A-A-------------------GG
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             29051 11 +     56732 AC--ATAG-----A-A-A-------------------GG
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6805542 11 +   6970761 AC--ATAG-----A-A-A-------------------GG
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             4936 11 +     18040 AC--ATAG-----A-A-A-------------------GG
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                14875 11 +     68503 AC--TTAG-----A-C-A-------------------AG
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13914663 11 +  90463843 AC--ATAT-----G-A-A-------------------GG
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1786879 11 +   2252614 AC--ATAG-----A-G-A-------------------GG
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_1391695                           1164 11 -      1866 AC--ATAG-----A-A-A-------------------GG
i Rhinopithecus_bieti.k119_1391695                      C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206376821 11 - 206558726 AC--ATAG-----A-A-A-------------------GG
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44855721 11 -  45163003 AC--ATAG-----A-A-A-------------------GG
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                18350 11 +    109198 AC--ATAG-----A-A-A-------------------GA
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       6675 11 +     12214 AC--TTAG-----A-A-A-------------------AG
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 I 363
s Saimiri_boliviensis.NW_024100938.1                     15671895 11 -  43202129 AC--ATAG-----A-A-A-------------------GG
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        3812 11 +     34089 AC--ATAG-----A-A-A-------------------GG
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              3753 11 -     60842 AC--ATAG-----A-A-A-------------------GG
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              3848 11 +     67014 AC--ATAG-----A-A-A-------------------GG
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              3826 11 +     60816 AC--ATAG-----A-A-A-------------------GG
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 3763 11 -     76454 AC--ATAG-----A-A-A-------------------GG
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17340489 11 -  30362882 AC--ATAG-----A-A-A-------------------GG
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         19848 11 -     62485 AC--ATAG-----A-A-A-------------------GG
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   30437 11 -    114521 AC--AATG-----A-A-G-------------------TA
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        2548 11 +     15331 AC--ATAG-----A-A-A-------------------GG
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       7945 11 +     20762 AC--ATAG-----A-A-A-------------------GG
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         117943 11 +    130994 AC--ATAG-----A-A-A-------------------GG
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           36734 11 +     46263 AC--ATAG-----A-A-A-------------------GG
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     29848 11 +     42640 AC--ATAG-----A-A-A-------------------GG
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        12892 11 +     30600 AC--ATAG-----A-A-A-------------------GG
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   99442 11 -    120886 AC--ATAT-----G-A-T-------------------GG
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            17056 11 +    739146 AC--ATTG-----A-A-A-------------------GA
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17750728 11 -  27805282 CC--ACTG-----A-A-G-------------------GC
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2238924 11 +   2842873 AC--ACAG-----G-A-A-------------------GA
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             233859  8 -    276980 CT--GCAG-----A-A-----------------------
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 I 2
s Suricata_suricatta.SurSur_flattened_line_20339            26649 11 +     62062 AT--ACAG-----A-A-A-------------------GG
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189270940 11 + 218635234 AC--ATAG-----A-A-A-------------------GG
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        14106 11 -  13920577 AC--ATAG-----A-A-A-------------------GG
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               5108 11 -      6213 AT--CTAG-----A-A-A-------------------GG
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               13808 13 +     45698 ATAAATAA-----G-A-A-------------------GG
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      805811 11 +   1148477 AC--ATCA-----A-A-A-------------------GG
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  56468 11 +     99546 AC--ATCA-----A-A-A-------------------GG
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               25630 10 +     42269 -T--ATGG-----G-A-A-------------------TT
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               58946 10 +     65473 -T--ATGG-----G-A-A-------------------TT
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194006952 11 - 194193292 AC--ATAG-----A-A-A-------------------GG
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             38456 11 -     47444 AC--ATAG-----G-A-A-------------------GA
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 I 1
s Tolypeutes_matacus.TolMat_scaffold_269431                  4669 11 +      6782 AC--ATAG-----G-A-A-------------------GG
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  134956 11 -    259118 AC--ATAG-----A-A-G-------------------GG
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        26055 11 +     38948 AC--ATAG-----A-A-A-------------------GG
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   19782 11 -     32910 AC--ATAG-----A-A-A-------------------GG
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      1169 11 -     12939 AC--ATAG-----A-A-A-------------------GG
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       1104 11 -     14244 AC--ATAG-----A-A-A-------------------GG
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           42502 11 -     54611 AC--ATAG-----A-A-A-------------------GG
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                         308 11 -     11566 AC--ATAG-----A-A-A-------------------GG
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     2480 11 -     15592 AC--ATAG-----A-A-A-------------------GG
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          1137 11 +     14371 AC--ATAG-----A-A-A-------------------GG
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  50889 11 +     51589 AC--ATAG-----A-A-A-------------------GG
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       14070 11 +     14732 AC--ATAG-----A-A-A-------------------GG
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       4542 11 -     28054 AC--ATAG-----A-A-A-------------------GG
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44659342 11 -  44834318 AC--ATAG-----A-A-A-------------------GG
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       1645 11 +     13828 AC--ATAG-----A-A-A-------------------GG
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   4252 11 +     90398 AT--ATCC-----A-A-A-------------------GG
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16081640 11 +  31416278 AC--ATAG-----A-A-A-------------------GG
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69312510 11 -  96451834 AC--ACAG-----A-A-A-------------------GG
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_139357                   963 11 +      2103 AC--AATG-----A-A-A-------------------CC
i Uropsilus_gracilis.UroGra_scaffold_139357             C 0 C 0
s Ursus_maritimus.KK498671.1                              6513866 11 +  28682327 AT--ATCG-----A-A-A-------------------GT
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  4436 11 -     20643 GC--ATTG-----G-A-A-------------------GG
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             23977 11 -     33872 GC--ATAG-----G-A-A-------------------GG
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1523749 11 -   2331223 AC--AGAG-----A-A-A-------------------GG
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                137213 11 -    281493 AT--GTAG-----A-A-A-------------------GG
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       126028 11 -    134049 AC--ATAG-----G-A-A-------------------GA
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        213345  8 -    227762 AT--GTAG-----A-A-----------------------
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 I 2
s Ziphius_cavirostris.ZipCav_flattened_line_127025           6005 11 -      8775 AC--ACAG-----A-A-A-------------------GG
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Dinomys_branickii.DinBra_scaffold_1996                   156356 54 +    228994 I
e Orycteropus_afer.OryAfe_flattened_line_13509              43378 16 -     66828 I
e Microgale_talazaci.MicTal_scaffold_34660                  30638 409 -     48017 I
e Manis_pentadactyla.KN017078.1                             35015 87 +     58827 I
e Manis_javanica.JSZB01003966.1                            144940 87 +    252755 I
e Elephantulus_edwardii.JH947210.1                        7804622 10712 +  15467074 I
e Echinops_telfairi.JH980316.1                           22994192 422 -  44670279 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     14107 296 -     20485 I
e Hylobates_pileatus_a.tarseq_592                             33311  5 -     60944 I
e Tupaia_tana.TupTan_flattened_line_68454                    4094 206 +     13056 I
e Tupaia_chinensis.KB320831.1                             2791839 261 -   3938065 I
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I
e Ctenodactylus_gundi.CteGun_scaffold_447                  207307  0 -    956709 C
e Nomascus_siki_b.tarseq_80                             24175  0 -  18771707 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               11103 11 +    209709 CG-------ATTCTTACA
s Acinonyx_jubatus.LLWD01000356.1                         2033084  1 +   3721120 A-----------------
i Acinonyx_jubatus.LLWD01000356.1                       C 0 I 13
s Acomys_cahirinus.AcoCah_scaffold_1625                    111748  1 -    189883 A-----------------
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10656401  1 +  23371972 G-----------------
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 I 13
s Allactaga_bullata.AllBul_scaffold_70162                   12118  1 -     22067 G-----------------
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                    454 11 -     60446 GG-------ATCCTTATA
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         1175 11 -     29318 GG-------ATTCTTATA
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                          112 11 +     38766 GG-------ATTCTTATA
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          1069 11 -     80423 GG-------ATTCTTATA
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             9368 11 -     18050 GG-------ATTCTTATA
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                 10458 11 -     11521 GG-------ATTCTTACA
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                             10045 11 -     21359 GG-------ATTCTTATA
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_298055                                 1339 11 +      1823 GG-------ATTCTTATA
i Alouatta_juara.k141_298055                            C 0 C 0
s Alouatta_macconnelli.k141_1331706                          9341 11 -     10438 GG-------ATTCTTATA
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            5997 11 +      7047 GG-------ATTCTTATA
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             9277 11 +     10410 GG-------ATTCTTATA
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            3085 11 -      4927 GG-------ATTCTTATA
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             6014 11 +      6429 GG-------ATTCTTATA
i Alouatta_seniculus.k141_990213                        C 0 I 27
s Ammotragus_lervia.NIVO01013474.1                        3519227 11 +   4113121 -GG-A-CT-TTTACA---
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      389397 11 -    631301 AA--A-TTCT----TATA
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            29809 11 +     33004 -GG-A-CT-TTTGTA---
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 61727 11 +     78111 GG-------ATTCTTATA
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            4668 11 +     22701 GG-------ATTCTTATA
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5748625 11 +   9889416 GG-------ATTCTTATA
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             5210 11 -    104377 GG-------ATTCTTATA
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               5212 11 +     23246 GG-------ATTCTTATA
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     2872  1 +      5067 G-----------------
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_587554                         224 10 +      9265 GG-------A-TTTTACA
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 7800 11 -     29036 AA--A-TTCT----TATA
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9538473 11 +  39197703 GG-------ATTCTTATA
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             59744 11 +     85812 GG-------ATTCTTATA
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                10756 11 +     89302 GG-------ATTCTTACA
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             15261 11 -     58268 GG-------ATTCTTATA
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             63252 11 +    119057 GG-------ATTCTTACA
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               5221 11 -     25888 GG-------ATTCTTATA
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 5860 11 -     16375 GG-------ATTCTTACA
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              2180 11 +      2719 GG-------ATTCTTACA
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26379241 11 +  51448160 -GG-A-CT-CTTATA---
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        4472 11 -     13118 -GG-A-CT-CTTATA---
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   42290 11 -     72089 -GG-A-CT-TTTATA---
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6558601 11 +   6870073 -GG-A-CT-TTTACA---
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138138827 11 - 161108492 -GG-A-CT-TTTATA---
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     571279 11 -    998990 -GG-A-CT-TTTATA---
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136294560 11 - 158972876 -GG-A-CT-TTTATA---
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1230326 11 -   1914593 -GG-A-CT-TTTATA---
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               113114 11 -    171031 GG-------ATTCTTATA
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 12142 11 +    125063 GG-------ATTCTTATA
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                14187 11 -    216513 GG-------ATTCTTATA
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        6727 11 -    134917 GG-------ATTCTTATA
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3218652 11 -   8989139 -GG-A-TT-CTTATA---
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           396357 11 -  15254737 -GG-A-TT-CTTATA---
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2972090 11 +   6889770 -GG-A-TT-CTTATA---
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11518384  1 +  39901454 G-----------------
i CanFam4.chr31                                         C 0 I 181
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   13408  1 +     87036 G-----------------
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 I 182
s Canis_lupus_dingo.QKWQ01001993.1                       11265051  1 -  35597290 g-----------------
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 I 181
s Canis_lupus_familiaris.chr31                           11087584  1 +  39895921 g-----------------
i Canis_lupus_familiaris.chr31                          C 0 I 182
s Canis_lupus_orion.HG994411.1                           16454600  1 -  44759192 g-----------------
i Canis_lupus_orion.HG994411.1                          C 0 I 181
s Capra_aegagrus.CM003214.1                              21324303 11 + 157394656 -GG-A-CT-TTTACA---
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135705530 11 - 157403528 -GG-A-CT-TTTACA---
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_979108                  1115  1 -      1248 G-----------------
i Capromys_pilorides.CapPil_scaffold_979108             I 1 C 0
s Carlito_syrichta.NW_007248099.1                          308156 11 +    345090 GG-------ATTCTTGTA
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               58598 11 +     67245 AA--A-TTCT----TATA
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   29807  1 +     33760 G-----------------
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   157863 11 -    276539 -C--A-ATAATTATA---
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15785745  1 -  24422027 G-----------------
i Cavia_aperea.AVPZ01000278.1                           I 1 C 0
s Cavia_porcellus.DS562889.1                             15797679  1 -  24440124 G-----------------
i Cavia_porcellus.DS562889.1                            I 1 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       175870  1 +    436027 G-----------------
i Cavia_tschudii.CavTsc_scaffold_488                    I 1 C 0
s Cebus_albifrons.Contig22                               18889957 11 -  29618158 GG-------ATTCTTATA
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 7501 11 -     26817 GG-------ATTCTTATA
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                11741 11 +     25043 GG-------ATTCTTATA
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         7189 11 +     21754 GG-------ATTCTTGTA
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4362966 15 +   7569818 GAT-T-CT-TATACAGGG
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         2718 15 -      9338 GAT-T-CT-TATACAGGG
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6554397 11 +   6739814 GG-------ATTCTTATA
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      25874 11 +     60454 GG-------ATTCTTATA
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          1079 11 -     21101 GG-------ATTCTTATA
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         58389 11 -    107033 GG-------ATTCTTATA
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        1281 11 -     17608 GG-------ATTCTTATA
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          28776 11 +     30494 GG-------ATTCTTATA
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          57622 11 -     59240 GG-------ATTCTTATA
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          1323 11 +     16677 GG-------ATTCTTATA
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           23481 11 +     35983 GG-------ATTCTTATA
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11990009 11 +  12117833 GG-------ATTCTTATA
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46476767 11 +  46592721 GG-------ATTCTTATA
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      40318 11 -     45581 GG-------ATTCTTATA
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       1324 11 +     35577 GG-------ATTCTTATA
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        1100 11 -     25661 GG-------ATTCTTATA
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        1078 11 -     17744 GG-------ATTCTTATA
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        20694 11 +     37128 GG-------ATTCTTATA
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           1909 11 -      6963 AG-------ATTATTATA
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           58157 11 -     68416 GG-------ATTCTTGTA
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            7200 11 +     13308 AG-------ATTCTTATA
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             4757 11 -     18223 GG-------ACTCTTATA
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             21780 11 +     25473 GG-------ACTCTTATA
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           40815 11 +     57117 GG-------ACTCTTATA
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          45494 11 +     54541 GG-------ACTCTTATA
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15960892  1 +  43084221 G-----------------
i Chinchilla_lanigera.JH721867.1                        I 1 C 0
s Chiropotes_israelita.k141_1189915                         70316 11 +    196370 GG-------ATTCTTATA
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          14496 11 +     40510 GG-------ATTCTTATA
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15138240 11 -  15256731 GG-------ATTCTTACA
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      33287 11 -     53260 GG-------ATTCTTACA
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101143851 11 + 101219884 GG-------ATTCTTATA
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                15583 11 -     21363 GG-------ATTCTTTCA
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           760891 11 +    964067 GG-------ATTCTTTCA
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10885617 11 +  10971483 GG-------ATTCTTATA
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147663781 11 + 156195979 GG-------ATTCTTATA
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            15766 11 +     23629 GG-------ATTCTTATA
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60611705 15 +  78930452 tag-a-CA-TCCCCAATT
i Condylura_cristata.JH655880.1                         C 0 I 875
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         38711 11 -     40477 AA--A-TTCT----TACA
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 277671  1 -    399297 G-----------------
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53028347  1 +  72327488 G-----------------
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_38409             18958 15 -     19186 TAG-G-CT-TCCTCAAGA
i Crocidura_indochinensis.CroInd_scaffold_38409         C 0 N 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            51094  1 -     70449 A-----------------
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 I 13
s Ctenodactylus_gundi.CteGun_scaffold_447                  207307  1 -    956709 T-----------------
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 29893  1 -     67205 G-----------------
i Ctenomys_sociabilis.CteSoc_scaffold_19489             I 1 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                16901  1 +     26546 A-----------------
i Cuniculus_paca.CunPac_flattened_line_16637            I 1 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             57993  1 -    236241 T-----------------
i Dasyprocta_punctata.DasPun_flattened_line_634         I 1 C 0
s Dasypus_novemcinctus.JH568778.1                          182747 11 -   6883506 AG-------ATTGTTATA
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16844016 11 +  31942871 GG-------ATTCTTAAA
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80035919 11 -  96802777 -GG-A-CT-CTTATA---
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18697907 11 -  18957592 AA--A-TTCT----TAAA
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 321613 15 +    993696 GAT-T-CT-TATACAGGG
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   2265 15 +    151128 GAT-T-CT-TATACAGGG
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dipodomys_ordii.KN672545.1                              3655287  1 +   4240102 G-----------------
i Dipodomys_ordii.KN672545.1                            I 3 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 26920  1 +     28912 G-----------------
i Dipodomys_stephensi.DipSte_scaffold_44365             I 3 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                35240  1 -     73477 G-----------------
i Dolichotis_patagonum.DolPat_scaffold_14102            I 1 C 0
s Eidolon_helvum.KE772537.1                                 11270 11 +     24177 aaa-t-tc-t----tata
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1490578 11 +   1727528 -GG-A-CT-TTTATA---
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        238904  1 -    369425 A-----------------
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           6017  1 -      7838 A-----------------
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4703293 10 +   6522550 aa--a-tt-t----tata
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5852030  2 -   7175178 GG----------------
i Equus_asinus.JREZ01000062.1                           C 0 I 1
s Equus_caballus.CM000402.2                              13350533  2 +  41866177 GG----------------
i Equus_caballus.CM000402.2                             C 0 I 1
s Equus_przewalskii.ATBW01073585.1                          12023  2 +     92910 GG----------------
i Equus_przewalskii.ATBW01073585.1                      C 0 I 1
s Erinaceus_europaeus.JH835290.1                         11531583 15 +  16010500 CAGGA-C--ATACCAAGA
i Erinaceus_europaeus.JH835290.1                        C 0 I 1064
s Erythrocebus_patas.Contig8                             48770418 11 -  48907691 GG-------ATTCTTATA
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          314125 11 +    330699 -GG-A-CT-CTTATA---
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             60579 11 +     89355 -GG-A-CT-CTTATA---
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              4201 11 +     13586 GG-------ATTCTTATA
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               4138 11 -      6809 GG-------ATTCTTATA
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            10611 11 +     36558 GG-------ATTCTTATA
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             6930 11 +     60246 GG-------ATTCTTATA
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                10409 11 +    109717 GG-------ATTCTTATA
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               14792 11 +     16540 GG-------ATTCTTATA
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                15065 11 +     27497 GG-------ATTCTTATA
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           17522 11 +     26808 GG-------ATTCTTATA
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                32257 11 +     46535 GG-------ATTCTTATA
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              14979 11 -     29447 GG-------ATTCTTATA
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129892059  1 - 159252932 A-----------------
i Felis_catus.CM001386.2                                C 0 I 13
s Felis_catus_fca126.CM031420.1                         129279128  1 - 158578461 A-----------------
i Felis_catus_fca126.CM031420.1                         C 0 I 13
s Felis_nigripes.FelNig_flattened_line_8080                 20273  1 +     52776 A-----------------
i Felis_nigripes.FelNig_flattened_line_8080             C 0 I 13
s Galago_moholi.ctg555                                     210107 11 -    847004 GG-------AGTTTTGCA
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           12486 11 -     43889 GG-------AGTTTTGCA
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           9554 11 +     27357 GG-------AGTTTTGCA
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               155413 11 +    324696 AG-------ATTCTTACA
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    180377 11 -    189561 -GG-A-CT-TTTATA---
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           12264  1 -     18683 G-----------------
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               4483 11 -     14630 GG-------ATTCTTATA
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119651582 11 - 195582420 GG-------ATTCTTATA
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   76754  1 +    118900 A-----------------
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         1002 11 +     10286 GG-------ATTCTTATA
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_1254239                            9178 11 +      9690 GG-------ATTCTTATA
i Hapalemur_gilberti.k141_1254239                       C 0 C 0
s Hapalemur_griseus.k141_1387522                             4807 11 +     56096 GG-------ATTCTTATA
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        28057 11 -     42470 GG-------ATTCTTATA
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        44681 11 -     54384 GG-------ATTCTTATA
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              16300  1 +     53719 A-----------------
i Helogale_parvula.HelPar_flattened_line_22962          C 0 I 13
s Hemitragus_hylocrius.HemHyl_scaffold_16669                26575 11 -     91191 -GG-A-CT-TTTACA---
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2550225  1 +  31725842 A-----------------
i Heterocephalus_glaber.JH602058.1                      I 1 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               56660  4 +     73687 GG-------GT-------
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              146200  9 +    277961 -GG-A-CT-C--ATA---
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      277489 11 -    477199 AA--A-TTCT----TATA
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              6648  4 -      9143 --------------TATA
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      3889 11 -   7690867 GG-------ATTCTTATA
i Hoolock_leuconedys.ctg79                                 I 11 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 16385  1 -     67322 A-----------------
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 I 13
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           18119  1 -    119109 G-----------------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       I 1 C 0
s Hylobates_abbotti.k141_493872                              4315 11 +      5897 GG-------ATTCTTATA
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_624065                               1179 11 +      2112 GG-------ATTCTTATA
i Hylobates_agilis.k141_624065                          C 0 C 0
s Hylobates_klossii.k141_466549                             10755 11 +     11537 GG-------ATTCTTATA
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14623860 11 -  25970782 GG-------ATTCTTATA
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            1116 11 -      2977 GG-------ATTCTTATA
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     5295  1 +     22540 G-----------------
i Hystrix_cristata.HysCri_scaffold_50788                I 1 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7125015  1 +  13083262 A-----------------
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_4418183                                    621 11 -      1457 GA-------ATTCTTACA
i Indri_indri.k141_4418183                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               8119 11 +     17520 -GG-A-CT-CTTATA---
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8564868  1 +  11848649 C-----------------
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               22739 11 +     37189 -GG-A-CT-CTTACA---
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          49337 11 -    147782 GG-------ATTCTTATA
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   113386 11 -    115756 AA--A-TTAC----TATA
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258406362 11 - 285822530 GG-------ATTCTTACA
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        23112 11 +     39228 GG-------ATACTTACA
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            52487 11 +     63517 GG-------ATACTTACA
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        77737 11 +    116806 GG-------ACACTTACA
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     30751 11 -     33031 GG-------ATACTTACA
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3085061  1 -   3498232 G-----------------
i Leptonychotes_weddellii.KB714749.1                    I 2 I 13
s Lepus_americanus.LepAme_scaffold_62849                    12103 11 +     22452 TG-------GTTTTTATA
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            135072 11 +   3060487 -GG-A-CT-CTTATA---
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19247486 11 +  19376315 GG-------ATTCTTATA
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            9869 11 +     84689 GG-------ATTTTTACG
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3777618 11 +   6799190 GG-------ATTTTTACG
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20591188 11 -  62548349 AG-------GTTCTTGTA
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11087040  1 +  39895028 N-----------------
i Lycaon_pictus.CM007556.1                              C 0 I 182
s Macaca_arctoides.k141_2201161                             19226 11 +     74745 GG-------ATTCTTATA
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12705682 11 +  12821369 GG-------ATTCTTATA
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                1327 11 -      3136 GG-------ATTCTTATA
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           46144 11 +     63263 GG-------ATTCTTATA
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                  847 11 -      2568 GG-------ATTCTTATA
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 1434 10 -      7381 G--------ATTCTTATA
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  44651 11 -     79256 GG-------ATTCTTATA
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196034759 11 + 196197964 GG-------ATTCTTATA
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11444927 11 +  11645122 GG-------ATTCTTATA
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   3598 11 -     46448 GG-------ATTCTTATA
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                1270 11 -     13212 GG-------ATTCTTATA
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 14951 11 -     55006 GG-------ATTCTTATA
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43840069 10 +  43892939 G--------ATTCTTATA
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               16237 11 -     24607 GG-------ATTCTTATA
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               3603 11 -     27140 GG-------ATTCTTATA
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                700684 11 +    802869 AA--A-TTCT----AATA
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43436645 11 -  43563597 GG-------ATTCTTATA
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4449471 11 -   4543643 GG-------ATTCTTATA
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36872854  1 +  64221397 G-----------------
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       63490 11 -    234502 AA--A-TTCT----TATG
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_1682431            159  1 -       288 G-----------------
i Mellivora_capensis.MelCap_flattened_line_1682431      N 0 N 0
s Meriones_unguiculatus.MerUng_scaffold_52233               11852  1 +     15977 A-----------------
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1046056  1 -  26018355 A-----------------
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Microcebus_murinus.CM007691.1                          16509367 11 +  47401472 GG-------ATTCTTACA
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               21782 11 -     32043 AA--A-TTCT----TATA
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22819197  1 -  98408828 G-----------------
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8208777 11 +  10048721 AA--A-TTCT----TATA
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            33434 10 +     45743 AA--A-TTCT----TAT-
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         1198 11 +     29742 GG-------ATTCTTATA
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        10574  1 -    104932 G-----------------
i Mirounga_angustirostris.MirAng_flattened_line_8852    I 2 I 13
s Mirza_zaza.k141_226143                                     4757 11 +      8497 GG-------ATTCTTATA
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 145507 11 +    154973 -GG-A-CT-CTTATA---
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                160293 11 +    265003 AA--A-TTCT----TACA
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 3678 11 -      4346 -GG-A-CT-TTTATA---
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  143996  1 -    168139 A-----------------
i Mungos_mungo.MunMun_flattened_line_8729               C 0 I 13
s Murina_feae.MurFea_scaffold_2254                          18653 11 -    100666 AA--A-TTCT----TATA
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70765702  1 +  92629107 A-----------------
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75488740  1 +  98207768 A-----------------
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67554975  1 +  89017189 A-----------------
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74329919  1 +  97876770 A-----------------
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             10779  1 +     98495 g-----------------
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     89176  1 -    117718 G-----------------
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 1 C 0
s Myotis_brandtii.KE161952.1                               966948 11 +   8389877 AA--A-TTCT----TATA
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5018624 11 +   6462685 AA--A-TTCT----TATA
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3464528 11 -   3747815 aaa-t-tc-t----tATA
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         9743 11 +     66751 AA--A-TTCT----TATA
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             4145 11 -      8794 CA-------ATTCATATA
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            117534  1 +    362372 A-----------------
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               7700 11 +     48152 GG-------ATTCTTATA
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4483966  1 -  14209539 G-----------------
i Neomonachus_schauinslandi.NINY01007774.1              I 2 I 13
s Neophocaena_asiaeorientalis.KZ688543.1                  3950121 11 -   4490290 -GG-A-CT-CTTATA---
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  48396 11 +     94413 AA--A-TTCT----TATA
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_302224                            1157 11 +      1516 GG-------ATTCTTATA
i Nomascus_annamensis.k141_302224                       C 0 C 0
s Nomascus_concolor.k141_226614                               417 11 -      5092 GG-------ATTCTTATA
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_642452                            1200 11 +      2851 GG-------ATTCTTATA
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_a.k141_595747                                  1838 11 +      4512 GG-------ATTCTTATA
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                29845  1 +   3668941 g-----------------
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 I 182
s Nycticebus_bengalensis.LG16                            65566303 11 -  95554990 GG-------ATTTTTACG
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            3032 11 +      6470 GG-------ATTTTTACG
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65668641 11 +  89412551 GG-------ATTTTTACA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4995185 11 -  23139505 GA-------ATTACTATA
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3684717  1 +  10294119 G-----------------
i Octodon_degus.JH651621.1                              I 1 C 0
s Odobenus_rosmarus.KB229369.1                             678629  1 -   3126709 G-----------------
i Odobenus_rosmarus.KB229369.1                          I 2 I 13
s Odocoileus_virginianus.KZ101650.1                       1078809 11 +   1425656 -GG-A-CT-TTTATA---
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         36103 11 +     78940 -GG-A-CT-TTTATA---
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  124454  1 +    145789 G-----------------
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  36255  1 +     62360 G-----------------
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7223804 11 -   7562323 -GG-A-CT-CTTATA---
i Orcinus_orca.KB316965.1                               C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141875122 11 + 163896628 AG-------GTTCTTATA
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      307127  1 -    505867 g-----------------
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 I 181
s Otolemur_crassicaudatus.k141_321880                       38203 11 +     38679 GG-------AGTTTTGCA
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18007631 11 -  38779656 GG-------AGTTTTGCA
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134076369 11 - 275406953 -GG-A-CT-TTTACA---
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      77583 11 +    140051 -GG-A-CT-TTTACA---
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127573843 11 - 205426864 GG-------ATTCTTATA
i Pan_paniscus.CM003386.1                               C 0 I 27
s Pan_troglodytes.CM009241.2                            120150996 11 - 196562556 GG-------ATTCTTATA
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  33441  1 +    295523 A-----------------
i Panthera_onca.PanOnc_flattened_line_1615              C 0 I 13
s Panthera_pardus.KV860323.1                              3637177  1 +  18214204 A-----------------
i Panthera_pardus.KV860323.1                            C 0 I 13
s Panthera_tigris.KE721879.1                              5026836  1 -   6340057 A-----------------
i Panthera_tigris.KE721879.1                            C 0 I 13
s Pantholops_hodgsonii.KE114631.1                         1065230 11 -   1292953 -GG-A-CT-TTTACA---
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188155436 11 - 188283584 GG-------ATTCTTATA
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             3753 11 +      5367 GG-------ATTCTTATA
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47512824 11 +  47705337 GG-------ATTCTTATA
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 66802 11 -    104429 GG-------ATTCTTATA
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    5334 11 +     14967 GG-------ATTCTTATA
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 1195 11 -      7628 GG-------ATTCTTATA
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    114869  1 -    135482 A-----------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 I 13
s Perodicticus_ibeanus.k141_117958                           4618 11 -     23713 GG-------ATTTTTACA
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            23927 11 -     27972 GG-------ATTTTTACA
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      42764  1 -     45160 G-----------------
i Perognathus_longimembris.PerPac_flattened_line_22291  I 3 C 0
s Peromyscus_maniculatus.KI615518.1                       4949487  1 -   8017169 G-----------------
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    11654  1 -     36578 A-----------------
i Petromus_typicus.PetTyp_scaffold_33007                I 1 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            120421 11 -    122454 -GG-A-CT-CTTATA---
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1987485                           1222 11 -      5908 GG-------ATTCTTATA
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       1842 11 -     17985 GG-------ATTCTTATA
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            1209 11 +      7694 GG-------ATTCTTATA
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26739687 11 +  26888534 GG-------ATTCTTATA
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            96593 11 +    112873 AA--A-TTCT----TATT
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             42819 11 -     61926 GG-------ATTCTTATA
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        24250 11 +     78826 GG-------ATTCTTATA
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              8199 11 -     15800 GG-------ATTCTTATA
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        11397 11 -     16101 GG-------ATTCTTATA
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          4706 11 +      9673 GG-------ATTCTTATA
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13473702 11 -  19735023 GG-------ATTCTTATA
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           12608 11 -     31692 GG-------ATTCTTATA
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           4489 11 +     21690 -GG-A-CT-CTTATA---
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       22041 11 +     44506 GG-------ATTCTTATG
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        22253 11 +     67491 GG-------ATTCTTATG
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      12492 11 -     98129 GG-------ATTCTTATG
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     22092 11 +    147771 GG-------ATTCTTATG
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        22347 11 -     23762 GG-------ATTCTTATG
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          2813 11 -     55515 GG-------ATTCTTATG
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         22166 11 +    152463 GG-------ATTCTTATG
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      8924 11 +      8943 GG-------ATTCTTATG
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 C 0
s Plecturocebus_miltoni.k141_841561                         11888 11 +    134592 GG-------ATTCTTATG
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          22476 11 -     75465 GG-------ATTCTTATG
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              186368 11 -    373494 GG-------ATTCTTATA
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19807016 11 +  19899266 GG-------ATTCTTATA
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               4944 11 -     15069 GG-------ATTCTTATA
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              5078 11 +     14865 GG-------ATTCTTATA
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                76524  4 +     78963 GG-------GT-------
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6847741 11 +  12164890 GG-------ATTCTTATA
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    666962 11 -   2312742 GG-------ATTCTTACA
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         2789 11 +     11805 GG-------ATTCTTACA
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           42125 11 +     52369 GG-------ATTCTTACA
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         34513 11 -     44753 GG-------ATTCTTACA
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            16435 11 +     27322 GG-------ATTCTTACA
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       16071 11 -     53241 GG-------ATTCTTACA
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         38343 11 -     48185 GG-------ATTCTTACA
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           33387  1 +     77221 A-----------------
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            2961 11 -     27784 AA--A-TTCT----TATT
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteropus_alecto.KB031157.1                             13245071 11 -  17261082 aaa-t-tc-t----tata
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             603021 11 -   3946241 aaa-t-tc-t----tata
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131533421  1 - 161321710 A-----------------
i Puma_concolor.QAVW01000427.1                          C 0 I 13
s Pygathrix_cinerea.k141_374971                             29062 11 +     56732 GG-------ATTCTTATA
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6805553 11 +   6970761 GG-------ATTCTTATA
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             4947 11 +     18040 GG-------ATTCTTATA
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                14886 11 +     68503 -GG-A-CT-TTTATA---
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13914674  1 +  90463843 A-----------------
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1786890 11 +   2252614 AA--A-TTCT----TATA
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_1391695                           1175 11 -      1866 GG-------ATTCTTATA
i Rhinopithecus_bieti.k119_1391695                      C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206376832 11 - 206558726 GG-------ATTCTTATA
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44855732 11 -  45163003 GG-------ATTCTTATA
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                18361 11 +    109198 AA--A-TTCC----TTTA
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 I 1
s Saiga_tatarica.SaiTat_scaffold_82192                       7049 11 +     12214 -gg-a-CT-TTTATA---
i Saiga_tatarica.SaiTat_scaffold_82192                  I 363 C 0
s Saimiri_boliviensis.NW_024100938.1                     15671906 11 -  43202129 GG-------ATTCTTATA
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        3823 11 +     34089 GG-------ATTCTTATA
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              3764 11 -     60842 GG-------ATTCTTATA
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              3859 11 +     67014 GG-------ATTCTTATA
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              3837 11 +     60816 GG-------ATTCTTATA
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 3774 11 -     76454 GG-------ATTCTTATA
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17340500 11 -  30362882 GG-------ATTCTTATA
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         19859 11 -     62485 GG-------ATTCTTATA
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   30448 15 -    114521 TAG-G-CC-TCCCCAACT
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 I 937
s Semnopithecus_entellus.k141_1572367                        2559 11 +     15331 GG-------ATTCTTATA
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       7956 11 +     20762 GG-------ATTCTTATA
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         117954 11 +    130994 GG-------ATTCTTATA
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           36745 11 +     46263 GG-------ATTCTTATA
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     29859 11 +     42640 GG-------ATTCTTATA
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        12903 11 +     30600 GG-------ATTCTTATA
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   99453  1 -    120886 G-----------------
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            17067 15 +    739146 TAG-A-CC-TCTCCaaga
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 I 884
s Sorex_araneus.JH798170.1                               17750739 15 -  27805282 TAG-T-CT-TCCCCAAAA
i Sorex_araneus.JH798170.1                              C 0 I 3364
s Spermophilus_dauricus.KZ294190.1                        2238935  1 +   2842873 G-----------------
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             233869  1 -    276980 G-----------------
i Spilogale_gracilis.SpiGra_flattened_line_905          I 2 I 13
s Suricata_suricatta.SurSur_flattened_line_20339            26660  1 +     62062 A-----------------
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 I 13
s Sus_scrofa.CM000824.4                                 189270951 11 + 218635234 -CG-A-AA-ATTATA---
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        14117 11 -  13920577 GG-------ATTCTTATA
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               5119 11 -      6213 AA--A-TTCT----TAGA
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 I 26
s Tamandua_tetradactyla.TamTet_scaffold_26877               13821 11 +     45698 CA-------ATTCATATA
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      805822 15 +   1148477 GG--ATCA-TATATATGG
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  56479 15 +     99546 GG--ATCA-TATATATGG
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               25640 11 +     42269 GG-------ATTCCTGTA
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               58956 11 +     65473 GG-------ATTCCTGTA
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194006963 11 - 194193292 GG-------ATTCTTATA
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             38468  1 -     47444 A-----------------
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         I 1 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  4680 11 +      6782 AG-------ATTATTATA
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  134967 11 -    259118 AA--A-TTCT----TATA
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        26066 11 +     38948 GG-------ATTCTTATA
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   19793 11 -     32910 GG-------ATTCTTATA
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      1180 11 -     12939 GG-------ATTCTTATA
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       1115 11 -     14244 GG-------ATTCTTATA
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           42513 11 -     54611 GG-------ATTCTTATA
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                         319 11 -     11566 GG-------ATTCTTATA
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     2491 11 -     15592 GG-------ATTCTTATA
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          1148 11 +     14371 GG-------ATTCTTATA
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  50900 11 +     51589 GG-------ATTCTTATA
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       14081 11 +     14732 GG-------ATTCTTATA
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       4553 11 -     28054 GG-------ATTCTTATA
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44659353 11 -  44834318 GG-------ATTCTTATA
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       1656 11 +     13828 GG-------ATTCTTATA
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   4263 11 +     90398 -AG-A-CT-TTTATA---
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16081651 11 +  31416278 AG-------GTTCTTATA
i Trichechus_manatus.JH594618.1                         C 0 I 21
s Tursiops_truncatus.MRVK01000923.1                      69312521 11 -  96451834 -GG-A-CT-CTTAAA---
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_139357                   974 15 +      2103 TAG-G-CC-TCTCTAATT
i Uropsilus_gracilis.UroGra_scaffold_139357             C 0 N 0
s Ursus_maritimus.KK498671.1                              6513877  1 +  28682327 G-----------------
i Ursus_maritimus.KK498671.1                            C 0 I 13
s Varecia_rubra.k141_432109                                  4447 11 -     20643 GG-------ATTCTTATA
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             23988 11 -     33872 GG-------ATTCTTATA
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1523760 11 -   2331223 -GG-A-TT-CTTATA---
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                137224  1 -    281493 G-----------------
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 I 181
s Xerus_inauris.XerIna_scaffold_7898                       126039  1 -    134049 G-----------------
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        213355  1 -    227762 G-----------------
i Zalophus_californianus.ZalCal_flattened_line_4097     I 2 I 13
s Ziphius_cavirostris.ZipCav_flattened_line_127025           6016 11 -      8775 -GG-A-CT-CTTATA---
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Dinomys_branickii.DinBra_scaffold_1996                   156356 54 +    228994 I
e Pteronura_brasiliensis.PteBra_flattened_line_1343        245740 24 -    344369 I
e Orycteropus_afer.OryAfe_flattened_line_13509              43378 16 -     66828 I
e Mustela_putorius.JH417978.1                             4423431 24 -  28371801 I
e Microgale_talazaci.MicTal_scaffold_34660                  30638 409 -     48017 I
e Manis_pentadactyla.KN017078.1                             35015 87 +     58827 I
e Manis_javanica.JSZB01003966.1                            144940 87 +    252755 I
e Enhydra_lutris.KZ291749.1                              85871252 24 +  99434291 I
e Elephantulus_edwardii.JH947210.1                        7804622 10712 +  15467074 I
e Echinops_telfairi.JH980316.1                           22994192 422 -  44670279 I
e Ailurus_fulgens.LNAC01000003.1                          7093542  0 -  16596857 C
e Zapus_hudsonius.ZapHud_scaffold_64392                     14107 296 -     20485 I
e Hylobates_pileatus_a.tarseq_592                             33311  5 -     60944 I
e Tupaia_tana.TupTan_flattened_line_68454                    4094 206 +     13056 I
e Tupaia_chinensis.KB320831.1                             2791839 261 -   3938065 I
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I
e Nomascus_siki_b.tarseq_80                             24175  0 -  18771707 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               11114 27 +    209709 CA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGCA-A-AG
s Acinonyx_jubatus.LLWD01000356.1                         2033098 24 +   3721120 ----GG------------AT-C-------------------CAA-----G--------GTGAGAA-----------CTGCA-A-AG
i Acinonyx_jubatus.LLWD01000356.1                       I 13 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    111749 23 -    189883 -----A------------AT-C-------------------TGT-----T--------AGTAGGT-----------CTGGA-G-AT
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 I 6
s Ailuropoda_melanoleuca.LNAT01000321.1                  10656415 24 +  23371972 ----GG------------AT-C-------------------CAT-----G--------GGTAGAA-----------CTGCA-A-AG
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 13 C 0
s Ailurus_fulgens.LNAC01000003.1                          7093542 22 -  16596857 ------------------AT-C-------------------CAT-----G--------GGCAGAA-----------AGGCA-A-AG
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   12119 48 -     22067 -----T------------AT-ATGTGTACATATGGCTTATATAG-----ATGGTATGTGGTTGAC-----------ATAT-GA---
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                    465 27 -     60446 CA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------TGGCA-A-AA
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         1186 27 -     29318 CA-GGG------------AT-C-------------------CAT-----G--------AGCGGAA-----------TGGCA-A-AA
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                          123 27 +     38766 CA-GGG------------AT-C-------------------CAT-----G--------AGCGGAA-----------TGGCA-A-AA
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          1080 27 -     80423 CA-GGG------------AT-C-------------------CAT-----G--------AGCGGAA-----------TGGCA-A-AA
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             9379 27 -     18050 CA-GGT------------AT-C-------------------CAT-----G--------AGTGGAA-----------TTGCA-A-AG
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                 10469 27 -     11521 CA-GGT------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGCA-A-AG
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                             10056 27 -     21359 CA-GGT------------AT-C-------------------CAT-----G--------AGTGGAA-----------TTGCA-A-AG
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_298055                                 1350 27 +      1823 CA-GGT------------AT-T-------------------CAT-----G--------AGTGGAA-----------CTGCA-A-AG
i Alouatta_juara.k141_298055                            C 0 C 0
s Alouatta_macconnelli.k141_1331706                          9352 27 -     10438 CA-GGT------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGCA-A-AG
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            6008 27 +      7047 CA-GGT------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGCA-A-AG
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             9288 27 +     10410 CA-GGT------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGCA-A-AG
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            3096 27 -      4927 CA-GGT------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGCA-A-AG
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_1676232                           26172 27 -     26576 CA-GGT------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGCA-A-AG
i Alouatta_seniculus.k141_1676232                       I 159 n 27
s Ammotragus_lervia.NIVO01013474.1                        3519238 24 +   4113121 CA-GGA------------AT-T-------------------CAT-----T--------TGTAGAA-----------C---A-A-AG
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      389408 27 -    631301 TA-GAG------------AT-C-------------------CAT-----G--------GGCAGAA-----------ACACA-A-AA
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            29820 24 +     33004 CA-GGG------------AT-T-------------------CAT-----T--------TGTAGAA-----------C---A-A-AG
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 61738 27 +     78111 CA-AGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGCA-A-AG
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            4679 27 +     22701 CA-AGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGCA-A-AG
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5748636 27 +   9889416 CA-AGG------------AT-C-------------------CAT-----G--------AGAGGAA-----------CTGCA-A-AG
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             5221 29 -    104377 CA-AGG------------AT-C------CA-----------CAT-----G--------AGTGGAA-----------CTGCA-A-AG
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               5223 29 +     23246 CA-AGG------------AT-C------CA-----------CAT-----G--------AGTGGAA-----------CTGCA-A-AG
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     2873 21 +      5067 -----G------------AC-C-------------------CAT-----A--------TGTAGAA-----------TTGCA-G---
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_587554                         234 27 +      9265 GA-GGA------------AC-T-------------------TAA-----G--------GGTGAGA-----------CTGCA-A-TA
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 7811 27 -     29036 CA-GAG------------AT-C-------------------CAA-----G--------GGCAGAA-----------CCACA-A-AA
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9538484 27 +  39197703 CA-GGG------------AT-C-------------------CAT-----G--------AGAGGAA-----------CTGCA-A-AG
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             59755 27 +     85812 CA-GGG------------AT-C-------------------CAT-----G--------AGAGGAA-----------CTGCA-A-AG
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                10767 27 +     89302 CA-GGG------------AT-C-------------------CAT-----G--------AGAGGAA-----------CTGCA-A-AG
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             15272 27 -     58268 CA-GGG------------AT-C-------------------CAT-----G--------AGAGGAA-----------CTGCA-A-AG
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             63263 27 +    119057 CA-GGG------------AT-C-------------------CAT-----G--------AGAGGAA-----------CTGCA-A-AG
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               5232 27 -     25888 CA-GGG------------AT-C-------------------CAT-----G--------AGAGGAA-----------CTGCA-A-AG
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 5871 27 -     16375 GA-GGG------------AT-C-------------------CAT-----G--------AGTGCAA-----------CAGCA-A-CA
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              2191 27 +      2719 GA-GGG------------AT-C-------------------CAT-----G--------AGTGCAA-----------CAGCA-A-CA
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26379252 27 +  51448160 CA-GGG------------AT-T-------------------CAT-----C--------AGTAGAA-----------CGGCA-A-AG
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        4483 27 -     13118 CA-GGG------------AT-T-------------------CAT-----C--------AGTAGAA-----------CGGCA-A-AG
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   42301 24 -     72089 CA-GGG------------AT-T-------------------CAC-----T--------TGTAGAA-----------C---A-A-AG
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6558612 24 +   6870073 CA-GAG------------AT-T-------------------CAT-----T--------TGTAGAA-----------C---A-A-AC
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138138838 24 - 161108492 CA-GAG------------AT-T-------------------CAT-----T--------TGTAGAA-----------C---A-A-AC
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     571290 24 -    998990 CA-GAG------------AT-T-------------------CAT-----T--------TGTAGAA-----------C---A-A-AC
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136294571 24 - 158972876 CA-GAG------------AT-T-------------------CAT-----T--------TGTAGAA-----------C---A-A-AC
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1230337 24 -   1914593 CA-GAG------------AT-T-------------------CAT-----T--------TGTAGAA-----------C---A-A-AC
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               113125 27 -    171031 CA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGTA-A-AG
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 12153 27 +    125063 CA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGTA-A-AG
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                14198 27 -    216513 CA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGTA-A-AG
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        6738 27 -    134917 CA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGTA-A-AG
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3218663 27 -   8989139 CA-GAG------------AT-T-------------------CAT-----G--------GATAGAA-----------CGGCC-A-AG
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           396368 27 -  15254737 CA-GAG------------AT-T-------------------CAT-----G--------GATAGAA-----------CTGCC-A-AG
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2972101 27 +   6889770 CA-GAG------------AT-T-------------------CAT-----G--------GATAGAA-----------CGGCC-A-AG
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11518566 21 +  39901454 ----GG------------AT-C-------------------CAT-----G--------GGTAGAA-----------TGGCA-----
i CanFam4.chr31                                         I 181 I 1
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   13591 21 +     87036 ----GG------------AT-C-------------------CAT-----G--------GGTAGAA-----------TGGCA-----
i Canis_lupus_VD.CanFam_VD_scaffold_16982               I 182 I 1
s Canis_lupus_dingo.QKWQ01001993.1                       11265233 21 -  35597290 ----GG------------AT-C-------------------CAT-----G--------GGTAGAA-----------TGGCA-----
i Canis_lupus_dingo.QKWQ01001993.1                      I 181 I 1
s Canis_lupus_familiaris.chr31                           11087767 21 +  39895921 ----GG------------AT-C-------------------CAT-----G--------GGTAGAA-----------TGGCA-----
i Canis_lupus_familiaris.chr31                          I 182 I 1
s Canis_lupus_orion.HG994411.1                           16454782 21 -  44759192 ----GG------------AT-C-------------------CAT-----G--------GGTAGAA-----------TGGCA-----
i Canis_lupus_orion.HG994411.1                          I 181 I 1
s Capra_aegagrus.CM003214.1                              21324314 24 + 157394656 CA-GGG------------AT-T-------------------CAT-----T--------TGTAGAA-----------C---A-A-AG
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135705541 24 - 157403528 CA-GGG------------AT-T-------------------CAT-----T--------TGTAGAA-----------C---A-A-AG
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_979108                  1116 23 -      1248 -----C------------AT-C-------------------TGT-----C--------AGCAGAA-----------CTGCA-A-AG
i Capromys_pilorides.CapPil_scaffold_979108             C 0 C 0
s Carlito_syrichta.NW_007248099.1                          308167 24 +    345090 CT-AAC------------AT-C-------------------CAT-----G--------AATGGAA-----------CT----A-AG
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               58609 27 +     67245 CA-GAG------------AT-C-------------------CAT-----G--------GGCAGAA-----------CCACA-A-AA
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   29808 23 +     33760 -----G------------AT-C-------------------CAT-----G--------ACTGGAA-----------CTGCA-A-AC
i Castor_canadensis.CasCan_scaffold_47037               C 0 I 52
s Catagonus_wagneri.CatWag_scaffold_1305                   157874 27 -    276539 CA-GGG------------AT-T-------------------CAT-----G--------GACAGAG-----------CTGCA-A-AG
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15785746 24 -  24422027 -----G----A-------AC-C-------------------TGT-----C--------AGTAGAA-----------CTGTC-C-AT
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15797680 24 -  24440124 -----G----A-------AC-C-------------------TGT-----C--------AGTAGAA-----------CTGTC-C-AG
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       175871 24 +    436027 -----G----A-------AC-C-------------------TGT-----C--------AGTAGAA-----------CTGTC-C-AG
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18889968 27 -  29618158 CA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGCA-A-AG
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 7512 27 -     26817 CA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGCA-A-AG
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                11752 27 +     25043 CA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGCA-A-AG
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         7200 24 +     21754 CT-AAC------------AT-C-------------------CAT-----G--------AATGGAA-----------CT----A-AG
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4362981 22 +   7569818 ------------------AT-C-------------------CAT-----G--------GGTGGAA-----------CTGCA-A-AG
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         2733 22 -      9338 ------------------AT-C-------------------CAT-----G--------GGTGGAA-----------CTGCA-A-AG
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6554408 27 +   6739814 CA-GGG------------AT-T-------------------CAT-----G--------AGCGGAA-----------TGGCA-A-AA
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      25885 27 +     60454 CA-GGG------------AT-C-------------------CAT-----G--------AGCGGAA-----------TGGCA-A-AA
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          1090 27 -     21101 CA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------TGGCA-A-AA
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         58400 27 -    107033 CA-GGG------------AT-C-------------------CAT-----G--------AGCGGAA-----------TGGCA-A-AA
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        1292 27 -     17608 CA-GGG------------AT-C-------------------CAT-----G--------AGCGGAA-----------TGGCA-A-AA
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          28787 27 +     30494 CA-GGG------------AT-C-------------------CAT-----G--------AGCGGAA-----------TGGCA-A-AA
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          57633 27 -     59240 CA-GGG------------AT-C-------------------CAT-----G--------AGAGGAA-----------TGGCA-A-AA
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          1334 27 +     16677 CA-GGG------------AT-C-------------------CAT-----G--------AGCGGAA-----------TGGCA-A-AA
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           23492 27 +     35983 CA-GGG------------AT-C-------------------CAT-----G--------AGCGGAA-----------TGGCA-A-AA
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11990020 27 +  12117833 CA-GGG------------AT-C-------------------CAT-----G--------AGAGGAA-----------TGGCA-A-AA
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46476778 27 +  46592721 CA-GGG------------AT-C-------------------CAT-----G--------AGCGGAA-----------TGGCA-A-AA
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      40329 27 -     45581 CA-GGG------------AT-C-------------------CAT-----G--------AGCGGAA-----------TGGCA-A-AA
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       1335 27 +     35577 CA-GGG------------AT-C-------------------CAT-----G--------AGAGGAA-----------TGGCA-A-AA
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        1111 27 -     25661 CA-GGG------------AT-C-------------------CAT-----G--------AGCGGAA-----------TGGCA-A-AA
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        1089 27 -     17744 CA-GGG------------AT-C-------------------CAT-----G--------AGCGGAA-----------TGGCA-A-AA
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        20705 27 +     37128 CA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------TGGCA-A-AA
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           1920 33 -      6963 CC-CGG------------GG-C-------------------CAT-----G--------GGTCAAACTCA-AGTG-A---CA-A-AG
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           58168 27 -     68416 GA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGCA-A-CA
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            7211 27 +     13308 GA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGCA-A-CA
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             4768 27 -     18223 CA-GGG------------AT-T-------------------CAT-----G--------AGTGGAA-----------CTATA-C-AG
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             21791 27 +     25473 CA-GGG------------AT-T-------------------CAT-----G--------AGTGGAA-----------CTATA-C-AG
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           40826 27 +     57117 CA-GGG------------AT-T-------------------CAT-----G--------AGTGGAA-----------CTATA-C-AG
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          45505 27 +     54541 CA-GGG------------AT-T-------------------CAT-----G--------AGTGGAA-----------CTATA-C-AG
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15960893 23 +  43084221 -----G------------TT-C-------------------GGC-----C--------AGTGGAA-----------CTGCA-A-AG
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         70327 27 +    196370 CA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGTA-A-AG
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          14507 27 +     40510 CA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGTA-A-AG
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15138251 27 -  15256731 CA-GGG------------AT-C-------------------CAT-----G--------AGCAGAA-----------TGGCA-A-AA
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      33298 27 -     53260 CA-GGG------------AT-C-------------------CAT-----G--------AGCAGAA-----------TGGCA-A-AA
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101143862 27 + 101219884 CA-GGG------------AT-C-------------------CAT-----G--------AGCGGAA-----------TGGCA-A-AA
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                15594 36 -     21363 TG-G-G------------GA-G-------------------CAT-----G--------GGTAGAATTGAGA-TGGTATGCA-A-AG
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           760902 36 +    964067 TG-G-G------------GA-G-------------------CAT-----G--------GGTAGAACTGAGA-TGGTATGCA-A-AG
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10885628 27 +  10971483 CA-GGG------------AT-C-------------------CAT-----G--------AGCGGAA-----------CTGCA-A-AA
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147663792 27 + 156195979 CA-GGG------------AT-C-------------------CAT-----G--------AGCGGAA-----------CTGCA-A-AA
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            15777 27 +     23629 CA-GGG------------AT-C-------------------CAT-----G--------AGCGGAA-----------ATGCA-A-AA
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60612595 27 +  78930452 CA-ACT------------TT-T-------------------GAT-----A--------AGTGTAA-----------CTGCC-A-TG
i Condylura_cristata.JH655880.1                         I 875 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 277672 23 -    399297 -----A------------AT-C-------------------TGT-----T--------AGTGAGT-----------CTGGA-G-AG
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53028348 23 +  72327488 -----A------------AT-C-------------------TGT-----T--------AGTGGGT-----------CTAGG-G-AG
i Cricetulus_griseus.LT883672.1                         C 0 I 4
s Cryptoprocta_ferox.CryFer_flattened_line_19014            51108 24 -     70449 ----GG------------AT-C-------------------CAA-----G--------GTGCGAA-----------TTGCA-A-AG
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 13 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  207308 23 -    956709 -----G------------AT-T-------------------TAT-----C--------AGTGGAA-----------ATGTA-A-AA
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 29894 23 -     67205 -----C------------AT-C-------------------TGT-----C--------AGCAGAA-----------CCGCA-A-AG
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                16902 24 +     26546 -----G----A-------AT-C-------------------TGT-----C--------AGTAGAA-----------CTGCA-A-AG
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             57994 20 -    236241 -----T----A-------AT-C-------------------TGT-----C--------AGTAGAA-----------CTGC------
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 I 2
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         38722  2 -     40477 TA------------------------------------------------------------------------------------
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          182758 33 -   6883506 CA-GGG------------AG-G-------------------CAT-----G--------GGTTAAACTAAGT-TGG----CA-A-AG
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16844027 27 +  31942871 GA-GGG------------AT-C-------------------CAT-----G--------AGTGAAA-----------ATGCA-A-CA
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80035930 27 -  96802777 CA-GGG------------AT-T-------------------CAT-----C--------AGTAGAA-----------CGGCA-A-AG
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18697918 27 -  18957592 CA-GAG------------AT-C-------------------CAT-----G--------GGCAGAG-----------CCCCC-A-AA
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 321628 22 +    993696 ------------------AT-C-------------------CAT-----G--------GGTGGAA-----------CTGCA-A-AG
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   2280 22 +    151128 ------------------AT-C-------------------CAT-----G--------GGTGGAA-----------CTGCA-A-AG
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dipodomys_ordii.KN672545.1                              3655288 22 +   4240102 -----G------------AGAT-------------------AAT-----G--------TGTAGAA-----------TTG---A-AG
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 26921 22 +     28912 -----G------------AGAT-------------------AAT-----G--------TGTAGAA-----------TTG---A-AG
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                35241 24 -     73477 -----G----A-------AC-C-------------------TGT-----C--------AGTAGAA-----------CTGCA-C-AT
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Eidolon_helvum.KE772537.1                                 11281 27 +     24177 TA-AGG------------AT-C-------------------CAT-----G--------GGTAGAA-----------CTGAA-A-AC
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1490589 24 +   1727528 CA-GGG------------AT-T-------------------CAT-----T--------TGTAGAA-----------C---A-A-AG
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        238905 23 -    369425 -----A------------AT-C-------------------TGT-----T--------AGTGGGT-----------CTGGA-G-AG
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           6018 23 -      7838 -----A------------AT-C-------------------TGT-----T--------AGTGGGT-----------CTGGA-G-AG
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85871276 18 +  99434291 ------------------------------------------AT-----G--------GGTAGAA-----------AGGCA-A-AG
i Enhydra_lutris.KZ291749.1                             I 24 C 0
s Eptesicus_fuscus.JH977687.1                             4703303 27 +   6522550 caGGG-------------AT-C-------------------CAT-----G--------GGTAGAA-----------CCACA-A-AA
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5852033 22 -   7175178 ------------------TT-C-------------------CAT-----G--------GGTGGAA-----------CTGCA-A-AG
i Equus_asinus.JREZ01000062.1                           I 1 C 0
s Equus_caballus.CM000402.2                              13350536 22 +  41866177 ------------------TT-C-------------------CAT-----G--------GGTGGAA-----------CTGCA-A-AG
i Equus_caballus.CM000402.2                             I 1 C 0
s Equus_przewalskii.ATBW01073585.1                          12026 22 +     92910 ------------------TT-C-------------------CAT-----G--------GGTGGAA-----------CTGCA-A-AG
i Equus_przewalskii.ATBW01073585.1                      I 1 C 0
s Erythrocebus_patas.Contig8                             48770429 27 -  48907691 CA-GGG------------AT-C-------------------CAT-----G--------AGCGGAA-----------TGGCA-A-AA
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          314136 27 +    330699 CA-GGG------------AT-T-------------------CAT-----C--------AGTAGAA-----------CGGCA-A-AG
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             60590 27 +     89355 CA-GGG------------AT-T-------------------CAT-----C--------AGTAGAA-----------CGGCA-A-AG
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              4212 27 +     13586 AA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGTA-A-CA
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               4149 27 -      6809 AA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGTA-A-CA
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            10622 27 +     36558 AA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGTA-A-CA
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             6941 27 +     60246 AA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CAGTA-A-CA
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                10420 27 +    109717 AA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGTA-A-CA
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               14803 27 +     16540 AA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGTA-A-CA
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                15076 27 +     27497 AA-GGG------------AT-C-------------------CAT-----G--------AATGGAA-----------CTGTA-A-CA
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           17533 27 +     26808 AA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGTA-A-CA
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                32268 27 +     46535 AA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGTA-A-CA
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              14990 27 -     29447 AA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGTA-A-CA
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129892073 24 - 159252932 ----GG------------AT-C-------------------CAA-----G--------GTGAGAA-----------CTGCA-A-AG
i Felis_catus.CM001386.2                                I 13 C 0
s Felis_catus_fca126.CM031420.1                         129279142 24 - 158578461 ----GG------------AT-C-------------------CAA-----G--------GTGAGAA-----------CTGCA-A-AG
i Felis_catus_fca126.CM031420.1                         I 13 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 20287 24 +     52776 ----GG------------AT-C-------------------CAA-----G--------GTGAGAA-----------CTGCA-A-AG
i Felis_nigripes.FelNig_flattened_line_8080             I 13 C 0
s Galago_moholi.ctg555                                     210118 27 -    847004 GA-GGG------------AC-T-------------------TAT-----G--------AGTGGAA-----------CTGCA-A-TA
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           12497 27 -     43889 GA-GGG------------AC-T-------------------TAT-----G--------AGTGGAA-----------CTGCA-A-TA
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           9565 27 +     27357 GA-AGG------------AC-T-------------------TAT-----G--------AGTAGAA-----------CTGCA-G-TA
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               155424 27 +    324696 CA-GGG------------AT-C-------------------TGT-----A--------AGTGGCA-----------CTGAA-A-AG
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 I 6
s Giraffa_tippelskirchi.LVKQ01S012154.1                    180388 24 -    189561 CA-GGG------------AT-T-------------------CAT-----T--------TGTAGAA-----------C---A-A-AG
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           12265 23 -     18683 -----C------------AT-G-------------------CAA-----A--------GGTGGAG-----------CTGAA-A-AG
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               4494 27 -     14630 CA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGCA-A-AG
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119651593 27 - 195582420 CA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGCA-A-AG
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   76755 23 +    118900 -----C------------AT-G-------------------CAA-----C--------GGTGGAG-----------CTGAA-A-AG
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         1013 27 +     10286 AA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGTA-A-CA
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_1254239                            9189 27 +      9690 AA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGTA-A-CA
i Hapalemur_gilberti.k141_1254239                       C 0 C 0
s Hapalemur_griseus.k141_1387522                             4818 27 +     56096 AA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGTA-A-CA
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        28068 27 -     42470 AA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGTA-A-CA
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        44692 27 -     54384 AA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGTA-A-CA
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              16314 24 +     53719 ----GG------------AT-C-------------------CAA-----A--------GTGAGAA-----------TTGCA-A-AG
i Helogale_parvula.HelPar_flattened_line_22962          I 13 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                26586 24 -     91191 CA-GGG------------AT-T-------------------CAT-----T--------TGTAGAA-----------C---A-A-AG
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2550226 23 +  31725842 -----G------------AT-T-------------------TAT-----C--------AGTAGAA-----------CTGTG-A-AG
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               56664  1 +     73687 -------------------------------------------------------------------------------------G
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              146209 28 +    277961 CA-GGG------------AT-T-------------------CAT-----T-G------AGTAGAA-----------CTGCA-A-AG
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      277500 30 -    477199 CA-GAA------------AT-C-------------------CATA-CA-G--------GGTAGAA-----------CTGCA-A-AA
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              6652 30 -      9143 CA-GAA------------AT-C-------------------CCTA-CA-G--------GGTAGAA-----------CTGCA-A-AA
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      3900 27 -   7690867 CA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGCA-A-AG
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 16399 24 -     67322 ----GG------------AC-C-------------------CAA-----G--------GTAAGAA-----------CTGCA-A-CG
i Hyaena_hyaena.HyaHya_flattened_line_20729             I 13 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           18120 24 -    119109 -----G----A-------AC-C-------------------TGT-----C--------AGCAGAA-----------CTGTA-T-AA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              4326 27 +      5897 CA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGCA-A-AG
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_624065                               1190 27 +      2112 CA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGCA-A-AG
i Hylobates_agilis.k141_624065                          C 0 C 0
s Hylobates_klossii.k141_466549                             10766 27 +     11537 CA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGCA-A-AG
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14623871 27 -  25970782 CA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGCA-A-AG
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            1127 27 -      2977 CA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGCA-A-AG
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     5296 23 +     22540 -----G------------AT-C-------------------CAT-----C--------AGTAGAA-----------CTGCA-A-AG
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7125016 23 +  13083262 -----G------------AC-C-------------------CAG-----G--------AGCAGAA-----------CTGCA-A-AG
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 I 2
s Indri_indri.k141_4418183                                    632 27 -      1457 GA-GGG------------AT-C-------------------CAT-----G--------AGTGCAA-----------CAGCA-A-CA
i Indri_indri.k141_4418183                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               8130 27 +     17520 CA-GGG------------AT-T-------------------CAT-----C--------AGTAGAA-----------CGGCA-A-AG
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8564869 47 +  11848649 -----t------------at-a-ttgtacatatggcttatgtag-----atggtatgtagtatac-----------atat-ga---
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               22750 27 +     37189 CA-GGG------------AT-T-------------------CAT-----C--------AGTAGAA-----------CAGCA-A-AG
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          49348 27 -    147782 CA-GTG------------AT-C-------------------CAT-----G--------AGAGGAA-----------CTGCA-A-AG
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   113397 27 -    115756 CAGGG-------------AT-C-------------------CAT-----G---------GCAGAA-----------ACACA-AAAA
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258406373 25 - 285822530 AA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------C--TA-A-CA
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        23123 27 +     39228 GA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGCC-A-CA
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            52498 27 +     63517 GA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGCC-A-CA
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        77748 27 +    116806 GA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGCC-A-CA
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     30762 27 -     33031 GA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGCC-A-CA
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3085075 24 -   3498232 ----GG------------AT-C-------------------CAT-----G--------GGTAGAA-----------TGGCC-A-AG
i Leptonychotes_weddellii.KB714749.1                    I 13 C 0
s Lepus_americanus.LepAme_scaffold_62849                    12114 27 +     22452 CA-GGG------------AT-C-------------------AGT-----G--------AGTAGAA-----------CTGTA-A-TT
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            135083 27 +   3060487 CA-GGG------------AT-T-------------------CAT-----C--------AGTAGAA-----------TGGCA-A-AG
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19247497 27 +  19376315 CA-GGG------------AT-C-------------------CAC-----G--------AGCGGAA-----------TGGCA-A-AA
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            9880 27 +     84689 GA-GAG------------AC-T-------------------TAT-----G--------AGTGGAA-----------CTGCA-A-TA
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3777629 27 +   6799190 GA-GAG------------AC-T-------------------TAT-----G--------AGTGGAA-----------CTGCA-A-TA
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20591199 18 -  62548349 AA-AGGGTGCACTGGTGAA-------------------------------------------------------------------
i Loxodonta_africana.GL010040.1                         C 0 I 32
s Lycaon_pictus.CM007556.1                               11087223 21 +  39895028 ----GG------------AT-C-------------------CAT-----G--------GGTAGAA-----------TGGCA-----
i Lycaon_pictus.CM007556.1                              I 182 I 1
s Macaca_arctoides.k141_2201161                             19237 27 +     74745 CA-GGG------------AT-C-------------------CAT-----G--------AGCGGAA-----------TGGCA-A-AA
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12705693 27 +  12821369 CA-GGG------------AT-C-------------------CAT-----G--------AGCGGAA-----------TGGCA-A-AA
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                1338 27 -      3136 CA-GGG------------AT-C-------------------CAT-----G--------AGCGGAA-----------TGGCA-A-AA
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           46155 27 +     63263 CA-GGG------------AT-C-------------------CAT-----G--------AGCGGAA-----------TGGCA-A-AA
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                  858 27 -      2568 CA-GGG------------AT-C-------------------CAT-----G--------AGCGGAA-----------TGGCA-A-AA
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 1444 27 -      7381 CA-GGG------------AT-C-------------------CAT-----G--------AGCGGAA-----------TGGCA-A-AA
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  44662 27 -     79256 CA-GGG------------AT-C-------------------CAT-----G--------AGCGGAA-----------TGGCA-A-AA
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196034770 27 + 196197964 CA-GGG------------AT-C-------------------CAT-----G--------AGCGGAA-----------TGGCA-A-AA
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11444938 27 +  11645122 CA-GGG------------AT-C-------------------CAT-----G--------AGCGGAA-----------TGGCA-A-AA
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   3609 27 -     46448 CA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------TGGCA-A-AA
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                1281 27 -     13212 CA-GGG------------AT-C-------------------CAT-----G--------AGCGGAA-----------TGGCA-A-AA
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 14962 27 -     55006 CA-GGG------------AT-C-------------------CAT-----G--------AGCGGAA-----------TGGCA-A-AA
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43840079 27 +  43892939 CA-GGG------------AT-C-------------------CAT-----G--------AGCGGAA-----------TGGCA-A-AA
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               16248 27 -     24607 CA-GGG------------AT-C-------------------CAT-----G--------AGCGGAA-----------TGGCA-A-AA
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               3614 27 -     27140 CA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------TGGCA-A-AA
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                700695 27 +    802869 CA-AGG------------AT-C-------------------CAT-----G--------GATAGAA-----------CTGAA-A-AC
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43436656 27 -  43563597 CA-GGG------------AT-C-------------------CAT-----G--------AGCGGAA-----------TGGCA-A-AA
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4449482 27 -   4543643 CA-GGG------------AT-C-------------------CAT-----G--------AGCGGAA-----------TGGCA-A-AA
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36872855 23 +  64221397 -----G------------AC-C-------------------CAT-----G--------AGCAGAA-----------CTGCA-A-AG
i Marmota_marmota.CZRN01000005.1                        C 0 I 2
s Megaderma_lyra.MegLyr_scaffold_3562                       63501 28 -    234502 CA-GGG------------ATTC-------------------CAT-----G--------GGTAGAA-----------CTGCA-A-AA
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433               84 24 -     87323 ----GG------------AT-C-------------------CAT-----G--------GGTAGAA-----------AGGCA-A-AG
i Mellivora_capensis.MelCap_flattened_line_15433        N 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               11853 23 +     15977 -----A------------AT-C-------------------TGT-----T--------AGTGGGT-----------CTGGA-G-AG
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 I 13
s Mesocricetus_auratus.KB708139.1                         1046057 23 -  26018355 -----A------------AT-C-------------------TGT-----T--------AGTGAGT-----------CTGGA-G-AG
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Microcebus_murinus.CM007691.1                          16509378 27 +  47401472 GA-GGG------------AT-C-------------------CAT-----G--------AGTAGAA-----------CTGCA-A-CA
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               21793 27 -     32043 CA-GAG------------AT-C-------------------CAT-----G--------GGCAGAA-----------TCACA-A-AA
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22819198 23 -  98408828 -----A------------AT-C-------------------TGT-----T--------AGTGGGT-----------CTGGA-G-AG
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8208788 27 +  10048721 CAGTG-------------AT-C-------------------TGC-----A--------GGTAAAA-----------CCACA-A-AA
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            33444 26 +     45743 -AGTG-------------AT-C-------------------TGC-----A--------GGTAGAA-----------CTACA-A-AA
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         1209 27 +     29742 CA-GGG------------AT-C-------------------CAT-----G--------AGCGGAA-----------TGGCA-A-AA
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        10588 24 -    104932 ----GG------------AT-C-------------------CAT-----G--------GGTAGAA-----------TGGCC-A-AG
i Mirounga_angustirostris.MirAng_flattened_line_8852    I 13 C 0
s Mirza_zaza.k141_226143                                     4768 27 +      8497 GA-GCA------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGCA-A-CA
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 145518 27 +    154973 CA-GGG------------AT-T-------------------CAT-----C--------AGTAGAA-----------CGGCA-A-AG
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                160304 27 +    265003 CA-GAA------------AT-C-------------------CAT-----G--------GGTAGAA-----------CCGCA-C-AG
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 3689 24 -      4346 CA-GGG------------AT-T-------------------CAT-----T--------TGTAGAA-----------C---A-A-AG
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  144010 24 -    168139 ----GG------------AT-C-------------------CAA-----A--------GTGAGAA-----------TTGCA-A-AG
i Mungos_mungo.MunMun_flattened_line_8729               I 13 C 0
s Murina_feae.MurFea_scaffold_2254                          18664 27 -    100666 CAGGG-------------AT-C-------------------CAT-----G--------GGTAGAA-----------CCACA-A-AA
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70765703 23 +  92629107 -----A------------AT-C-------------------TGT-----T--------AGTGGGt-----------ttgga-g-aa
i Mus_caroli.LT608236.1                                 C 0 I 11
s Mus_musculus.chr16                                     75488741 23 +  98207768 -----A------------AT-C-------------------TGT-----T--------AGTGGGT-----------ttgga-g-aa
i Mus_musculus.chr16                                    C 0 I 10
s Mus_pahari.LT608305.1                                  67554976 23 +  89017189 -----A------------AT-C-------------------TGT-----T--------AGTGGAT-----------TTGga-g-ag
i Mus_pahari.LT608305.1                                 C 0 I 11
s Mus_spretus.CM004110.1                                 74329920 23 +  97876770 -----A------------AT-C-------------------TGT-----T--------AGTGGGt-----------ttgga-g-aa
i Mus_spretus.CM004110.1                                C 0 I 10
s Muscardinus_avellanarius.MusAve_scaffold_9643             10780 23 +     98495 -----c------------aa-g-------------------caa-----t--------ggtagag-----------atgaa-a-ag
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4423455 18 -  28371801 ------------------------------------------AT-----G--------GGTAGAA-----------AGGCA-A-AG
i Mustela_putorius.JH417978.1                           I 24 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     89177 23 -    117718 -----C------------GT-C-------------------TGT-----C--------AGCAGAA-----------CTGCA-A-AG
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               966959 27 +   8389877 CAGGG-------------AT-C-------------------CAT-----G--------GGTAGAA-----------CTACA-A-AA
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5018635 27 +   6462685 CAGGG-------------AT-C-------------------CAT-----G--------GGTAGAA-----------CCACA-A-AA
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3464539 27 -   3747815 CAGGG-------------AT-C-------------------CAT-----G--------GGTAGAA-----------CCACA-A-AA
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         9754 27 +     66751 CAGGG-------------AT-C-------------------CAT-----G--------GGTAGAA-----------CCACA-A-AA
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             4156 36 -      8794 CG-G-G------------AA-G-------------------AAT-----G--------GATAGAACTGAGT-TGGTATGCA-A-AG
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            117535 23 +    362372 -----C------------AT-C-------------------CAT-----T--------AATGGAT-----------CTGGA-G-ag
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               7711 27 +     48152 CA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGCA-A-AA
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4483980 24 -  14209539 ----GG------------AT-C-------------------CAT-----G--------GGTAGAA-----------TGGCC-A-AG
i Neomonachus_schauinslandi.NINY01007774.1              I 13 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3950132 27 -   4490290 CA-GGG------------AT-T-------------------CAT-----C--------AGTAGAA-----------CGGCA-A-AG
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  48407 27 +     94413 CA-GAG------------TT-C-------------------CAG-----G--------GGTTGAA-----------TCACA-A-AA
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_302224                            1168 27 +      1516 CA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGCA-A-AG
i Nomascus_annamensis.k141_302224                       C 0 C 0
s Nomascus_concolor.k141_226614                               428 27 -      5092 CA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGCA-A-AG
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_642452                            1211 27 +      2851 CA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGCA-A-AG
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             24175  1 -  18771707 -------------------------------------------------------------------------------------g
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  1849 27 +      4512 GA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGCA-A-AG
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                30028 21 +   3668941 ----GG------------AT-C-------------------CAT-----G--------GGTAGAA-----------TGGCA-----
i Nyctereutes_procyonoides.CAJHUB010000786.1            I 182 I 1
s Nycticebus_bengalensis.LG16                            65566314 27 -  95554990 GA-GAG------------AC-T-------------------TAT-----G--------AGTGGAA-----------CTGCA-A-TA
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            3043 27 +      6470 GA-GAG------------AC-T-------------------TAT-----G--------AGTGGAA-----------CTGCA-A-TA
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65668652 27 +  89412551 GA-GAG------------AC-T-------------------TAT-----G--------AGTGGAA-----------CTGCA-A-TA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4995196 27 -  23139505 CA-ACA------------AT-C-------------------AGT-----G--------AATAGag-----------ctgta-t-tt
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3684718 23 +  10294119 -----C------------AT-C-------------------GGT-----C--------AGCAGAA-----------Gtgca-a-ag
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             678643 24 -   3126709 ----GG------------AT-C-------------------CAT-----G--------GACAGAA-----------TGGCC-A-AG
i Odobenus_rosmarus.KB229369.1                          I 13 C 0
s Odocoileus_virginianus.KZ101650.1                       1078820 24 +   1425656 CA-GGG------------AT-T-------------------CAT-----T--------TGTAGAA-----------C---A-A-AA
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         36114 24 +     78940 CA-GGG------------AT-T-------------------CAT-----T--------TGTAGAA-----------C---A-A-AG
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  124455 23 +    145789 -----A------------AT-C-------------------TGT-----T--------AGTGGGT-----------CTGGA-G-AG
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  36256 23 +     62360 -----A------------AT-C-------------------TGT-----T--------AGTGAGT-----------CTGGA-G-AG
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7223815 27 -   7562323 CA-GGG------------AT-T-------------------CAT-----C--------AATAGAA-----------CAGCA-A-AG
i Orcinus_orca.KB316965.1                               C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141875133 27 + 163896628 CT-GTG------------AT-C-------------------AGT-----G--------AATAGAA-----------CTATA-A-CT
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      307309 21 -    505867 ----GG------------AT-C-------------------CAT-----G--------GGTAGAA-----------TGGCA-----
i Otocyon_megalotis.JAEUCK010005121.1                   I 181 I 1
s Otolemur_crassicaudatus.k141_321880                       38214 27 +     38679 GA-GGG------------AC-T-------------------TAT-----G--------AGTGGAA-----------CTGCA-A-TA
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18007642 27 -  38779656 GA-GGG------------AC-T-------------------TAT-----G--------AGTGGAA-----------CTGCA-A-TA
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134076380 24 - 275406953 CA-GGG------------AT-T-------------------CAT-----T--------TGTAGAA-----------C---A-A-AG
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      77594 24 +    140051 CA-GGG------------AT-T-------------------CAT-----T--------TGTAGAA-----------C---A-A-AG
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.AJFE02000033.1                                 184 27 -      1012 CA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGCA-A-AG
i Pan_paniscus.AJFE02000033.1                           I 69 I 54
s Pan_troglodytes.CM009241.2                            120151007 27 - 196562556 CA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGCA-A-AG
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  33455 24 +    295523 ----GG------------AT-C-------------------CAA-----G--------GTGAGAA-----------CTGCA-A-AG
i Panthera_onca.PanOnc_flattened_line_1615              I 13 C 0
s Panthera_pardus.KV860323.1                              3637191 24 +  18214204 ----GG------------AT-C-------------------CAA-----G--------GTGAGAA-----------CTGCA-A-AG
i Panthera_pardus.KV860323.1                            I 13 C 0
s Panthera_tigris.KE721879.1                              5026850 24 -   6340057 ----GG------------AT-C-------------------CAA-----G--------GTGAGAA-----------CTGCA-A-AG
i Panthera_tigris.KE721879.1                            I 13 C 0
s Pantholops_hodgsonii.KE114631.1                         1065241 24 -   1292953 CA-GGG------------AT-T-------------------CAT-----T--------TGTAGAA-----------C---A-A-AG
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188155447 27 - 188283584 CA-GGG------------AT-C-------------------CAT-----G--------AGCGGAA-----------TGGCA-A-AA
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             3764 27 +      5367 CA-GGG------------AT-C-------------------CAT-----G--------AGCGGAA-----------TGGCA-A-AA
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47512835 27 +  47705337 CA-GGG------------AT-C-------------------CAT-----G--------AGCGGAA-----------TGGCA-A-AA
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 66813 27 -    104429 CA-GGG------------AT-C-------------------CAT-----G--------AGCGGAA-----------TGGCA-A-AA
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    5345 27 +     14967 CA-GGG------------AT-C-------------------CAT-----G--------AGCGGAA-----------TGGCA-A-AA
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 1206 27 -      7628 CA-GGG------------AT-C-------------------CAT-----G--------AGCGGAA-----------TGGCA-A-AA
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    114883 24 -    135482 ----GG------------AT-C-------------------CAA-----G--------TCAAAAA-----------CTGCA-A-AG
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 I 13 C 0
s Perodicticus_ibeanus.k141_117958                           4629 27 -     23713 GA-GAA------------AC-T-------------------TAT-----G--------AGTGAGA-----------CTGCA-G-TA
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            23938 27 -     27972 GA-GAA------------AC-T-------------------TAT-----G--------AGTGAGA-----------CTGCA-G-TA
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      42765 22 -     45160 -----G------------AGAT-------------------TAT-----G--------TATAGAA-----------TTG---A-AG
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4949488 23 -   8017169 -----A------------AT-C-------------------TGT-----T--------AGTGAGT-----------CTGGa-g-ag
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    11655 23 -     36578 -----T------------AC-T-------------------TAA-----C--------AGGGGGA-----------CTGCA-A-AG
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            120432 27 -    122454 CA-GGG------------AT-T-------------------CAT-----C--------AGTAGAA-----------CGGCA-A-AG
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1987485                           1233 27 -      5908 CA-GGG------------AT-C-------------------CAT-----G--------AGCGGAA-----------CTGCA-A-AA
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       1853 27 -     17985 CA-GGG------------AT-C-------------------CAT-----G--------AGCGGAA-----------CTGCA-A-AA
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            1220 27 +      7694 CA-GGG------------AT-C-------------------CAT-----G--------AGCGGAA-----------CTGCA-A-AA
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26739698 27 +  26888534 CA-GGG------------AT-C-------------------CAC-----G--------AGCGGAA-----------CTGCA-A-AA
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            96604 27 +    112873 CAGGG-------------AT-C-------------------CAT-----G--------GGTAGTA-----------CCACA-A-AA
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             42830 27 -     61926 CA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGTA-A-AG
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        24261 27 +     78826 CA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGTA-A-AG
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              8210 27 -     15800 CA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGTA-A-AG
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        11408 27 -     16101 CA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGTA-A-AG
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          4717 27 +      9673 CA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGTA-A-AG
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13473713 27 -  19735023 CA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGTA-A-AG
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           12619 27 -     31692 CA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGTA-A-AG
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           4500 27 +     21690 CA-GGG------------AT-T-------------------CAT-----C--------AGTAGAA-----------CGGCA-A-AG
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       22052 27 +     44506 CA-GGG------------AT-T-------------------CAT-----G--------AGTGGAA-----------CTATA-C-AG
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        22264 27 +     67491 CA-GGG------------AT-T-------------------CAT-----G--------AGTGGAA-----------CTATA-C-AG
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      12503 27 -     98129 CA-GGG------------AT-T-------------------CAT-----G--------AGTGGAA-----------CTATA-C-AG
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     22103 27 +    147771 CA-GGG------------AT-T-------------------CAT-----G--------AGTGGAA-----------CTATA-C-AG
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        22358 27 -     23762 CA-GGG------------AT-T-------------------CAT-----G--------AGTGGAA-----------CTATA-C-AG
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          2824 27 -     55515 CA-GGG------------AT-T-------------------CAT-----G--------AGTGGAA-----------CTATA-C-AG
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         22177 27 +    152463 CA-GGG------------AT-T-------------------CAT-----G--------AGAGGAA-----------CTATA-C-AG
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_1595076                      8935  8 +      8943 CA-GGG------------AT-T----------------------------------------------------------------
i Plecturocebus_hoffmannsi.k141_1595076                 C 0 N 0
s Plecturocebus_miltoni.k141_841561                         11899 27 +    134592 CA-GGG------------AT-T-------------------CAT-----G--------AGTGGAA-----------CTATA-C-AG
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          22487 27 -     75465 CA-GGG------------AT-T-------------------CAT-----G--------AGAGGAA-----------CTATA-C-AG
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              186379 27 -    373494 CA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGCA-A-AG
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19807027 27 +  19899266 CA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGCA-A-AG
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               4955 27 -     15069 CA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGCA-A-AA
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              5089 27 +     14865 CA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGCA-A-AA
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                76528  1 +     78963 -------------------------------------------------------------------------------------G
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6847752 27 +  12164890 AA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGTA-A-CA
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    666973 27 -   2312742 GA-GGG------------AT-C-------------------CAT-----G--------AGTGCAA-----------CAGCA-A-CA
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         2800 27 +     11805 GA-GGG------------AT-C-------------------CAT-----G--------AGTGCAA-----------CGGCA-A-CA
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           42136 27 +     52369 GA-GGG------------AT-C-------------------CAT-----G--------AGTGCAA-----------CAGCA-A-CA
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         34524 27 -     44753 GA-GGG------------AT-T-------------------CAT-----G--------AGTGCAA-----------CAGCA-A-CA
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            16446 27 +     27322 GA-GGG------------AT-C-------------------CAT-----G--------AGTGCAA-----------CAGCA-A-CA
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       16082 27 -     53241 GA-GGG------------AT-C-------------------CAT-----G--------AGTGCAA-----------CAGCA-A-CA
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         38354 27 -     48185 GA-GGG------------AT-C-------------------CAT-----G--------AGTGCAA-----------CAGCA-A-CA
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           33388 23 +     77221 -----A------------AT-C-------------------TGT-----T--------AGTGGGT-----------Ctgga-g-ag
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            2972 27 -     27784 CA-GAG------------AT-C-------------------CAT-----G--------AATAGAA-----------GCACA-C-AA
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        245764 18 -    344369 ------------------------------------------AT-----G--------GGTAGAA-----------AGGCA-A-AG
i Pteronura_brasiliensis.PteBra_flattened_line_1343     I 24 C 0
s Pteropus_alecto.KB031157.1                             13245082 27 -  17261082 CA-AGG------------AT-C-------------------CAT-----G--------GGTAGAA-----------CTGAA-A-AC
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             603032 27 -   3946241 CA-AGG------------AT-C-------------------CAT-----G--------GGTAGAA-----------CTGAA-A-AC
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131533435 24 - 161321710 ----GG------------AT-C-------------------CAA-----G--------GTGAGAA-----------CTGCA-A-AG
i Puma_concolor.QAVW01000427.1                          I 13 C 0
s Pygathrix_cinerea.k141_374971                             29073 27 +     56732 CA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGCA-A-AA
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6805564 27 +   6970761 CA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGCA-A-AA
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             4958 27 +     18040 CA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGCA-A-AA
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                14897 24 +     68503 CA-GGG------------AT-T-------------------CAT-----T--------TGTAGAA-----------C---A-A-AA
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13914675 23 +  90463843 -----A------------AT-C-------------------TGT-----T--------AGTGGAT-----------CTGGa-g-ag
i Rattus_norvegicus.chr11                               C 0 I 13
s Rhinolophus_sinicus.LVEH01000179.1                      1786901 30 +   2252614 CA-GGG------------AT-C-------------------CATA-CA-G--------GGTAGAA-----------CTGCA-A-AA
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_1391695                           1186 27 -      1866 CA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGCA-A-AA
i Rhinopithecus_bieti.k119_1391695                      C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206376843 27 - 206558726 CA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGCA-A-AA
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44855743 27 -  45163003 CA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGCA-A-AA
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                18373 20 +    109198 ------------------AT-C-------------------CAT-----A---------GTAGAA-----------CTGA--A-AC
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            I 1 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       7060 24 +     12214 CA-GGG------------AT-T-------------------CAT-----T--------TGTAGAA-----------C---A-A-AG
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15671917 27 -  43202129 CA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGCA-A-AG
i Saimiri_boliviensis.NW_024100938.1                    C 0 I 1
s Saimiri_cassiquiarensis.k141_808270                        3834 27 +     34089 CA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGCA-A-AG
i Saimiri_cassiquiarensis.k141_808270                   C 0 I 1
s Saimiri_macrodon.k141_2087127                              3775 27 -     60842 CA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGCA-A-AG
i Saimiri_macrodon.k141_2087127                         C 0 I 1
s Saimiri_oerstedii.k141_841116                              3870 27 +     67014 CA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGCA-A-AG
i Saimiri_oerstedii.k141_841116                         C 0 I 1
s Saimiri_sciureus.k141_1947592                              3848 27 +     60816 CA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGCA-A-AG
i Saimiri_sciureus.k141_1947592                         C 0 I 1
s Saimiri_ustus.k141_1282476                                 3785 27 -     76454 CA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGCA-A-AG
i Saimiri_ustus.k141_1282476                            C 0 I 1
s Sapajus_apella.ctg10                                   17340511 27 -  30362882 CA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGCA-A-AG
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         19870 27 -     62485 CA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGCA-A-AG
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   31400 27 -    114521 CA-CCT------------TT-T-------------------CAC-----A--------GGTGGAA-----------CTGCC-A-TA
i Scalopus_aquaticus.ScaAqu_scaffold_9300               I 937 C 0
s Semnopithecus_entellus.k141_1572367                        2570 27 +     15331 CA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGCA-A-AA
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       7967 27 +     20762 CA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGCA-A-AA
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         117965 27 +    130994 CA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGCA-A-AA
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           36756 27 +     46263 CA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGCA-A-AA
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     29870 27 +     42640 CA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGCA-A-AA
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        12914 27 +     30600 CA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGCA-A-AA
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   99454 23 -    120886 -----A------------AT-C-------------------TGT-----T--------AGTGGGT-----------CTGTA-G-AA
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            17966 28 +    739146 ca-att------------tt-t-------------------cac-----a--------GGAGGAA-----------ATGCT-AATT
i Solenodon_paradoxus.SolPar_flattened_line_1012        I 884 C 0
s Spermophilus_dauricus.KZ294190.1                        2238936 23 +   2842873 -----G------------AC-C-------------------CAT-----G--------AGCAGAA-----------CTGCA-A-AG
i Spermophilus_dauricus.KZ294190.1                      C 0 I 2
s Spilogale_gracilis.SpiGra_flattened_line_905             233883 24 -    276980 ----GC------------AT-C-------------------CAT-----G--------GGTAGAA-----------GGGCA-A-AG
i Spilogale_gracilis.SpiGra_flattened_line_905          I 13 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            26674 24 +     62062 ----GG------------AT-C-------------------CAA-----G--------GTGAGAA-----------CTGCA-A-AT
i Suricata_suricatta.SurSur_flattened_line_20339        I 13 C 0
s Sus_scrofa.CM000824.4                                 189270962 27 + 218635234 CA-GGG------------AT-T-------------------CAT-----T--------GTTAGAA-----------CTGCA-A-AG
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        14128 27 -  13920577 CA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGCA-A-AG
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_148405               4981 26 -      6063 AA-GA-------------AT-C-------------------CAT-----G--------AGTAGAA-----------CCACA-T-AA
i Tadarida_brasiliensis.TadBra_scaffold_148405          I 84 I 61
s Tamandua_tetradactyla.TamTet_scaffold_26877               13832 37 +     45698 CG-GGG------------AA-G-------------------CAT-----G--------GATAGAACTGAGT-TGGTATGCA-A-AG
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      805837 22 +   1148477 ------------------AT-C-------------------CAT-----G--------AGTAGAA-----------CTGCA-A-AG
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  56494 22 +     99546 ------------------AT-C-------------------CAT-----G--------AGTAGAA-----------CTGCA-A-AG
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               25651 24 +     42269 CC-AAC------------AT-C-------------------CAT-----G--------AATGGAA-----------CT----A-AG
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               58967 24 +     65473 CC-AAC------------AT-C-------------------CAT-----G--------AATGGAA-----------CT----A-AG
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194006974 27 - 194193292 CA-GGG------------AT-C-------------------CAT-----G--------AGCGGAA-----------TGGCA-A-AA
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             38469 23 -     47444 -----T------------TT-C-------------------TAT-----C--------AGTGCAG-----------CTGCA-A-AG
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  4691 22 +      6782 CA-GGG------------GG-G-------------------CAT-----G--------GG-----T-G-G---------CA-A-AG
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  134978 27 -    259118 CA-GAG------------AT-C-------------------CAT-----G--------GGAAGAA-----------CCACA-A-AA
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        26077 27 +     38948 CA-GGG------------AT-C-------------------CAT-----A--------AGTGGAA-----------CTGCA-A-AA
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   19804 27 -     32910 CA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGCA-A-AA
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      1191 27 -     12939 CA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGCA-A-AA
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       1126 27 -     14244 CA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGCA-A-AA
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           42524 27 -     54611 CA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGCA-A-AA
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                         330 27 -     11566 CA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGCA-A-AA
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     2502 27 -     15592 CA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGCA-A-AA
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          1159 27 +     14371 CA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGCA-A-AA
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  50911 27 +     51589 CA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGCA-A-AA
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       14092 27 +     14732 CA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGCA-A-AA
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       4564 27 -     28054 CA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGCA-A-AA
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44659364 27 -  44834318 CA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGCA-A-AA
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       1667 27 +     13828 CA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGCA-A-AA
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   4274 24 +     90398 CA-GGA------------AT-T-------------------CAT-----C--------CAGAGAA-----------C---A-C-CA
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16081683  8 +  31416278 ----------------------------------------------------------------------------atgca-a-ag
i Trichechus_manatus.JH594618.1                         I 21 I 10
s Tursiops_truncatus.MRVK01000923.1                      69312532 27 -  96451834 CA-GGG------------AT-T-------------------CAT-----C--------AGTAGAA-----------CAGCA-A-AG
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                    402 32 +     10241 CA-ACT------------TT-T-------------------CACATGACA--------GGTGGAA-----------CTGTC-A-TG
i Uropsilus_gracilis.UroGra_scaffold_69449              N 0 C 0
s Ursus_maritimus.KK498671.1                              6513891 24 +  28682327 ----GG------------AT-C-------------------CAT-----G--------GGTAGAA-----------CTGCA-A-AG
i Ursus_maritimus.KK498671.1                            I 13 C 0
s Varecia_rubra.k141_432109                                  4458 27 -     20643 AA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGTA-A-CA
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             23999 27 -     33872 AA-GGG------------AT-C-------------------CAT-----G--------AGTGGAA-----------CTGTA-A-CA
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1523771 27 -   2331223 CA-GAG------------AT-T-------------------CAT-----G--------GATAGAA-----------CTGCC-A-AG
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                137406 21 -    281493 ----GG------------AT-C-------------------CAT-----G--------GGTAGAA-----------TGGCA-----
i Vulpes_lagopus.VulLag_flattened_line_2045             I 181 I 1
s Xerus_inauris.XerIna_scaffold_7898                       126040 20 -    134049 -----G------------AT-C-------------------CAT-----G--------AGTAGAA-----------CTGCA-----
i Xerus_inauris.XerIna_scaffold_7898                    C 0 I 3
s Zalophus_californianus.ZalCal_flattened_line_4097        213369 24 -    227762 ----GG------------AT-C-------------------CAT-----G--------GACAGAA-----------TGGCC-A-AG
i Zalophus_californianus.ZalCal_flattened_line_4097     I 13 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           6027 27 -      8775 CA-GGG------------AT-T-------------------CAT-----C--------AGTAGAA-----------TGGCA-A-AG
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Sorex_araneus.JH798170.1                               17750754 3364 -  27805282 I
e Dinomys_branickii.DinBra_scaffold_1996                   156356 54 +    228994 I
e Erinaceus_europaeus.JH835290.1                         11531598 1064 +  16010500 I
e Orycteropus_afer.OryAfe_flattened_line_13509              43378 16 -     66828 I
e Microgale_talazaci.MicTal_scaffold_34660                  30638 409 -     48017 I
e Manis_pentadactyla.KN017078.1                             35015 87 +     58827 I
e Manis_javanica.JSZB01003966.1                            144940 87 +    252755 I
e Elephantulus_edwardii.JH947210.1                        7804622 10712 +  15467074 I
e Echinops_telfairi.JH980316.1                           22994192 422 -  44670279 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     14107 296 -     20485 I
e Hylobates_pileatus_a.tarseq_592                             33311  5 -     60944 I
e Tupaia_tana.TupTan_flattened_line_68454                    4094 206 +     13056 I
e Tupaia_chinensis.KB320831.1                             2791839 261 -   3938065 I
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               11141 16 +    209709 TT----T--TG---------T-------------------AAA-A--ATC----TAT
s Acinonyx_jubatus.LLWD01000356.1                         2033122 16 +   3721120 TT----T--TG---------T-------------------C-A-AA-ATC----TGT
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    111778 38 -    189883 TT----TTTTG--------TTTGTTTGTTTGTTTTTAAGTA-A-AA-TTC----TGT
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 6 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10656439 16 +  23371972 TT----T--TG---------T-------------------C-A-AA-ATC----TAC
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7093564 16 -  16596857 TT----T--TG---------T-------------------T-A-AA-ATC----TAT
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   12167 16 -     22067 --------------------TT------------------T-A-TA-ATATGTATGT
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                    492 16 -     60446 TT----T--GG---------T-------------------CAA-A--ATC----TGT
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         1213 16 -     29318 TT----T--GG---------T-------------------CAA-A--ATC----TGT
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                          150 16 +     38766 TT----T--GG---------T-------------------CAA-A--ATC----TGT
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          1107 16 -     80423 TT----T--GG---------T-------------------CAA-A--ATC----TGT
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             9406 16 -     18050 TT----T--TG---------T-------------------CAA-A--ATA----TGT
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                 10496 16 -     11521 TT----T--TG---------T-------------------CAA-A--ATA----TAT
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                             10083 16 -     21359 TT----T--TG---------T-------------------CAA-A--ATA----TGT
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_298055                                 1377 16 +      1823 TT----T--TG---------T-------------------CAA-A--ATC----TGT
i Alouatta_juara.k141_298055                            C 0 C 0
s Alouatta_macconnelli.k141_1331706                          9379 16 -     10438 TT----T--TG---------T-------------------CAA-A--ATA----TGT
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            6035 16 +      7047 TT----T--TG---------T-------------------CAA-A--ATA----TGT
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             9315 16 +     10410 TT----T--TG---------T-------------------CAA-A--ATC----TGT
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            3123 16 -      4927 TT----T--TG---------T-------------------CAA-A--ATC----TGT
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             6052 16 +      6429 TT----T--TG---------T-------------------CAA-A--ATC----TGT
i Alouatta_seniculus.k141_990213                        I 27 C 0
s Ammotragus_lervia.NIVO01013474.1                        3519262 16 +   4113121 TT----T--TG---------T-------------------C-A-AA-ATC----TGT
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      389435 16 -    631301 TT----T--TG---------T-------------------C-A-AA-GTC----TGT
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            29844 16 +     33004 TT----T--TG---------T-------------------C-A-AA-ATC----TGT
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 61765 16 +     78111 TT----T--TG---------T-------------------CAA-A--ATC----TGT
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            4706 16 +     22701 TT----T--TG---------T-------------------CAA-A--ATC----TGT
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5748663 16 +   9889416 TT----T--TG---------T-------------------CAA-A--ATC----tgt
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             5250 16 -    104377 TT----T--TG---------T-------------------CAA-A--ATC----TGT
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               5252 16 +     23246 TT----T--TG---------T-------------------CAA-A--ATC----TGT
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     2894 16 +      5067 TT----T--TA---------T-------------------T-A-AA-ATC----TGT
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_587554                         261  5 +      9265 TT----T--TG----------------------------------------------
i Arctocebus_calabarensis.k141_587554                   C 0 I 79
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 7838 16 -     29036 TT----T--TG---------T-------------------C-A-AA-ATC----TGT
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9538511 16 +  39197703 TT----T--TG---------T-------------------CAA-A--ATC----TGT
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             59782 16 +     85812 TT----T--TG---------T-------------------CAA-A--ATC----TGT
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                10794 16 +     89302 TT----T--TG---------T-------------------CAA-A--ATC----TGT
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             15299 16 -     58268 TT----T--TG---------T-------------------CAA-A--ATC----TGT
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             63290 16 +    119057 TT----T--TG---------T-------------------CAA-A--ATC----TGT
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               5259 16 -     25888 TT----T--TG---------T-------------------CAA-A--ATC----TGT
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 5898 15 -     16375 TT----T--TG---------T-------------------C-A-A--ATA----TGT
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              2218 15 +      2719 TT----T--TG---------T-------------------C-A-A--ATA----TGT
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26379279 16 +  51448160 TT----T--TG---------T-------------------C-A-AA-ATC----TGT
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        4510 16 -     13118 TT----T--TG---------T-------------------C-A-AA-ATC----TGT
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   42325 16 -     72089 TT----T--TG---------T-------------------C-A-AA-ATC----TGT
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6558636 16 +   6870073 TT----T--TG---------T-------------------C-A-A-aatc----tgt
i Bison_bison.KN264915.1                                C 0 I 251
s Bos_indicus.CM003021.1                                138138862 16 - 161108492 TT----T--TG---------T-------------------C-A-a-aatc----tgt
i Bos_indicus.CM003021.1                                C 0 I 241
s Bos_mutus.JH883513.1                                     571314 16 -    998990 TT----T--TG---------T-------------------C-A-a-aatc----tgt
i Bos_mutus.JH883513.1                                  C 0 I 251
s Bos_taurus.CM000177.6                                 136294595 16 - 158972876 TT----T--TG---------T-------------------C-A-a-aatc----tgt
i Bos_taurus.CM000177.6                                 C 0 I 241
s Bubalus_bubalis.KI419065.1                              1230361 17 -   1914593 TT----T--TG---------T-------------------C-A-AAaatc----tgt
i Bubalus_bubalis.KI419065.1                            C 0 I 241
s Cacajao_ayresi.k141_724503                               113152 16 -    171031 TT----T--TG---------T-------------------CAA-A--ATC----TGT
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 12180 16 +    125063 TT----T--TG---------T-------------------CAA-A--ATC----TGT
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                14225 16 -    216513 TT----T--TG---------T-------------------CAA-A--ATC----TGT
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        6765 16 -    134917 TT----T--TG---------T-------------------CAA-A--ATC----TGT
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3218690 16 -   8989139 TT----T--TG---------T-------------------C-A-AA-ATC----tgt
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           396395 16 -  15254737 TT----T--TG---------T-------------------C-A-AA-ATC----TGT
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2972128 16 +   6889770 TT----T--TG---------T-------------------C-A-AA-ATC----TGT
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11518588 16 +  39901454 CC----T--TG---------T-------------------C-A-AA-ATC----TGT
i CanFam4.chr31                                         I 1 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   13613 16 +     87036 CC----T--TG---------T-------------------C-A-AA-ATC----TGT
i Canis_lupus_VD.CanFam_VD_scaffold_16982               I 1 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11265255 16 -  35597290 CC----T--TG---------T-------------------C-A-AA-ATC----TGT
i Canis_lupus_dingo.QKWQ01001993.1                      I 1 C 0
s Canis_lupus_familiaris.chr31                           11087789 16 +  39895921 CC----T--TG---------T-------------------C-A-AA-ATC----TGT
i Canis_lupus_familiaris.chr31                          I 1 C 0
s Canis_lupus_orion.HG994411.1                           16454804 16 -  44759192 CC----T--TG---------T-------------------C-A-AA-ATC----TGT
i Canis_lupus_orion.HG994411.1                          I 1 C 0
s Capra_aegagrus.CM003214.1                              21324338 16 + 157394656 TT----T--TG---------T-------------------C-A-AA-ATC----TGT
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135705565 16 - 157403528 TT----T--TG---------T-------------------C-A-AA-ATC----TGT
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_979108                  1139 16 -      1248 TT----T--TG---------T-------------------C-A-AA-ATC----TGT
i Capromys_pilorides.CapPil_scaffold_979108             C 0 C 0
s Carlito_syrichta.NW_007248099.1                          308191 14 +    345090 TT----T--TG---------T-------------------CAA-A--ATC----T--
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               58636 16 +     67245 TT----T--TG---------T-------------------C-A-AA-ATC----TGT
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   29883 16 +     33760 TT----T--TC---------C-------------------C-A-AA-GTC----AGT
i Castor_canadensis.CasCan_scaffold_47037               I 52 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   157901 16 -    276539 TT----T--GG---------T-------------------C-A-AA-ATC----CGT
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15785770 15 -  24422027 T-----T--TG---------T-------------------C-A-A-GATC----TGT
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15797704 15 -  24440124 T-----T--TG---------T-------------------C-A-A-GATC----TGT
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       175895 15 +    436027 T-----T--TG---------T-------------------C-A-A-GATC----TGT
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18889995 16 -  29618158 TT----T--TG---------T-------------------CAA-A--ATC----TGT
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 7539 16 -     26817 TT----T--TG---------T-------------------CAA-A--ATC----TGT
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                11779 16 +     25043 TT----T--TG---------T-------------------CAA-A--ATC----TGT
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         7224 14 +     21754 TT----T--TG---------T-------------------CAA-A--ATC----T--
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4363003 16 +   7569818 TT----T--TG---------T-------------------C-A-AA-ATC----TGt
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         2755 16 -      9338 TT----T--TG---------T-------------------C-A-AA-ATC----TGT
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6554435 16 +   6739814 TT----T--GG---------T-------------------CAA-A--ATc----tgt
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      25912 16 +     60454 TT----T--GG---------T-------------------CAA-A--ATC----TGT
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          1117 16 -     21101 TT----T--GG---------T-------------------CAA-A--ATC----TGT
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         58427 16 -    107033 TT----T--GG---------T-------------------CAA-A--ATC----TGT
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        1319 16 -     17608 TT----T--GG---------T-------------------CAA-A--ATC----TGT
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          28814 16 +     30494 TT----T--GG---------T-------------------CAA-A--ATC----TGT
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          57660 16 -     59240 TT----T--GG---------T-------------------CAA-A--ATC----TGT
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          1361 16 +     16677 TT----T--GG---------T-------------------CAA-A--ATC----TGT
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           23519 16 +     35983 TT----T--GG---------T-------------------CAA-A--ATC----TGT
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11990047 16 +  12117833 TT----T--GG---------T-------------------CAA-A--ATC----TGT
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46476805 16 +  46592721 TT----T--GG---------T-------------------CAA-A--ATC----TGT
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      40356 16 -     45581 TT----T--GG---------T-------------------CAA-A--ATC----TGT
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       1362 16 +     35577 TT----T--GG---------T-------------------CAA-A--ATC----TGT
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        1138 16 -     25661 TT----T--GG---------T-------------------CAA-A--ATC----TGT
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        1116 16 -     17744 TT----T--GG---------T-------------------CAA-A--ATC----TGT
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        20732 16 +     37128 TT----T--GG---------T-------------------CAA-A--ATC----TGT
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           1953 16 -      6963 TT----T--TG---------T-------------------C-A-AA-ATC----TGT
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           58195 15 -     68416 TT----T--TG---------T-------------------C-A-A--ATA----TGT
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            7238 15 +     13308 TT----T--TG---------T-------------------C-A-A--ATA----TGT
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             4795 16 -     18223 TT----T--TG---------T-------------------CAA-A--ATC----TGC
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             21818 16 +     25473 TT----T--TG---------T-------------------CAA-A--ATC----TGC
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           40853 16 +     57117 TT----T--TG---------T-------------------CAA-A--ATC----TGC
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          45532 16 +     54541 TT----T--TG---------T-------------------CAA-A--ATC----TGC
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15960916 16 +  43084221 TT----T--TG---------T-------------------C-A-AA-ATC----TGA
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         70354 16 +    196370 TT----T--TG---------T-------------------CAA-A--ATC----TGT
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          14534 16 +     40510 TT----T--TG---------T-------------------CAA-A--ATC----TGT
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15138278 16 -  15256731 TT----T--GG---------T-------------------CAA-A--ATC----TGT
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      33325 16 -     53260 TT----T--GG---------T-------------------CAA-A--ATC----TGT
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101143889 16 + 101219884 TT----T--GG---------T-------------------CAA-A--ATc----tgt
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                15630 16 -     21363 TT----T--CG---------T-------------------C-A-AA-ATC----TGT
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           760938 16 +    964067 TT----T--CG---------T-------------------C-A-AA-ATC----TGT
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10885655 16 +  10971483 TT----T--TG---------T-------------------CAA-A--GTc----tgt
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147663819 16 + 156195979 TT----T--TG---------T-------------------CAA-A--GTC----TGT
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            15804 16 +     23629 TT----T--TG---------T-------------------CAA-A--GTC----TGT
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60612622 16 +  78930452 TT----T--TG---------T-------------------c-a-a-aatt----tct
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         38724 12 -     40477 ----------G---------T-------------------C-A-AA-GTT----TAT
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 277695 29 -    399297 TT----G--TT--------TTT-TTT-TTT-T----AAATC-A-AA-TTC----TGT
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53028375 24 +  72327488 --------------------TT------tgcttttcaaata-a-a-attc----tgC
i Cricetulus_griseus.LT883672.1                         I 4 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            51132 16 -     70449 TT----T--TA---------T-------------------C-A-AA-ATC----TGT
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  207331 16 -    956709 TT----T--TG---------A-------------------T-A-AA-GTC----TGT
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 29917 16 -     67205 TT----T--TG---------T-------------------C-A-AA-ATC----TGT
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                16926 16 +     26546 TT----C--TG---------T-------------------C-A-A-GATC----TGT
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             58016 16 -    236241 TT----T--TG---------T-------------------C-A-A-GATC----TGT
i Dasyprocta_punctata.DasPun_flattened_line_634         I 2 C 0
s Dasypus_novemcinctus.JH568778.1                          182791 16 -   6883506 TT----T--TG---------T-------------------C-A-AA-ATC----TGT
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16844054 15 +  31942871 TT----T--TG---------T-------------------C-A-A--ATA----TGT
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80035957 16 -  96802777 GC----T--TG---------T-------------------C-A-AA-ATC----TGT
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18697945 16 -  18957592 TT----T--TG---------T-------------------C-A-AA-ATC----TGT
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 321650 16 +    993696 TT----T--TG---------T-------------------C-A-AA-ATC----TGT
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   2302 16 +    151128 TT----T--TG---------T-------------------C-A-AA-ATC----TGT
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dipodomys_ordii.KN672545.1                              3655310 16 +   4240102 TT----T--TG---------T-------------------C-A-AA-ACT----TGT
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 26943 16 +     28912 TT----T--TC---------T-------------------C-A-AA-ACT----TGT
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                35265 16 -     73477 TT----T--CG---------C-------------------C-A-A-GATC----TAT
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Eidolon_helvum.KE772537.1                                 11308 16 +     24177 TT----T--TG---------T-------------------C-A-AA-ATC----AGT
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1490613 16 +   1727528 TT----G--TG---------T-------------------C-A-AA-ATC----TGT
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        238928 30 -    369425 TT----G--CG--------TTT-T--GCTT-TCT--AAATA-A-AA-TCT----TGA
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           6041 30 -      7838 TT----G--CG--------TT-GT--GCTT-TCT--AAATA-A-AA-TCT----TGA
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85871294 17 +  99434291 TT----T--TG---------T-------------------C-AAAA-ATC----TAT
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4703330 16 +   6522550 TT----T--TG---------T-------------------C-A-AA-ATT----TGT
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5852055 16 -   7175178 TT----T--TG---------T-------------------C-A-AA-ATC----TGT
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13350558 16 +  41866177 TT----T--TG---------T-------------------C-A-AA-ATC----TGT
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          12048 16 +     92910 TT----T--TG---------T-------------------C-A-AA-ATC----TGT
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erythrocebus_patas.Contig8                             48770456 16 -  48907691 TT----T--GG---------T-------------------CAA-A--ATC----TGT
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          314163 16 +    330699 TT----T--TG---------T-------------------C-A-AA-ATC----TGT
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             60617 16 +     89355 TT----T--TG---------T-------------------C-A-AA-ATC----TGT
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              4239 15 +     13586 TT----T--TG---------T-------------------C-A-A--ATA----TGT
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               4176 15 -      6809 TT----T--TG---------T-------------------C-A-A--ATA----TGT
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            10649 15 +     36558 TT----T--TG---------T-------------------C-A-A--ATA----TGT
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             6968 15 +     60246 TT----T--TG---------T-------------------C-A-A--ATA----TGT
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                10447 15 +    109717 TT----T--TG---------T-------------------C-A-A--ATA----TGT
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               14830 15 +     16540 TT----T--TG---------T-------------------C-A-A--ATA----TGT
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                15103 15 +     27497 TT----T--TG---------T-------------------C-A-A--ATA----TGT
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           17560 15 +     26808 TT----T--TG---------T-------------------C-A-A--ATA----TGT
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                32295 15 +     46535 TT----T--TG---------T-------------------C-A-A--ATA----TGT
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              15017 15 -     29447 TT----T--TG---------T-------------------C-A-A--ATA----TGT
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129892097 16 - 159252932 TT----T--TG---------T-------------------C-A-AA-ATC----TGT
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129279166 16 - 158578461 TT----T--TG---------T-------------------C-A-AA-ATC----TGT
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 20311 16 +     52776 TT----T--TG---------T-------------------C-A-AA-ATC----TGT
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               155457  6 +    324696 -----------------------------------------------ATC----TCT
i Galeopterus_variegatus.GalVar_scaffold_354            I 6 C 0
s Galago_moholi.ctg555                                     210145  5 -    847004 TT----T--TG----------------------------------------------
i Galago_moholi.ctg555                                  C 0 I 70
s Galago_senegalensis.k141_964197                           12524  5 -     43889 TT----T--TG----------------------------------------------
i Galago_senegalensis.k141_964197                       C 0 I 70
s Galagoides_demidoff.k141_1769638                           9592  5 +     27357 TT----T--TG----------------------------------------------
i Galagoides_demidoff.k141_1769638                      C 0 I 79
s Giraffa_tippelskirchi.LVKQ01S012154.1                    180412 16 -    189561 CT----T--TG---------T-------------------C-A-AA-ATC----TGT
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           12288 16 -     18683 TT----T--TG---------T-------------------C-A-AA-ATC----TGT
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               4521 16 -     14630 TT----T--TG---------T-------------------CAA-A--ATC----TGT
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119651620 16 - 195582420 TT----T--TG---------T-------------------CAA-A--ATc----tgt
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   76778 16 +    118900 TT----T--CT---------T-------------------C-A-AA-ATC----TGT
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         1040 14 +     10286 TT----T--TG---------T-------------------C-A-A--ATA----TG-
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_1254239                            9216 14 +      9690 TT----T--TG---------T-------------------C-A-A--ATA----TG-
i Hapalemur_gilberti.k141_1254239                       C 0 C 0
s Hapalemur_griseus.k141_1387522                             4845 14 +     56096 TT----T--TG---------T-------------------C-A-A--ATA----TG-
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        28095 14 -     42470 TT----T--TG---------T-------------------C-A-A--ATA----TG-
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        44719 14 -     54384 TT----T--TG---------T-------------------C-A-A--ATG----TG-
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              16338 16 +     53719 TT----T--TA---------T-------------------C-A-AA-ATC----TGC
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                26610 16 -     91191 TT----T--TG---------T-------------------C-A-AA-ATC----TGT
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2550249 16 +  31725842 TT----T--TG---------T-------------------C-A-AA-ATC----TGT
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               56665  6 +     73687 TT----T--TG---------T------------------------------------
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 I 10
s Hippopotamus_amphibius.HipAmp_scaffold_1308              146237 16 +    277961 TT----T--TG---------T-------------------C-A-GA-ATC----TGT
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      277530 16 -    477199 TT----T--TG---------T-------------------C-A-AA-ATT----GGC
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              6682 16 -      9143 TT----T--TG---------T-------------------C-A-AA-ATC----AGC
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      3927 16 -   7690867 TT----T--TG---------T-------------------CAA-A--ATC----TGT
i Hoolock_leuconedys.ctg79                                 C 0 I 8
s Hyaena_hyaena.HyaHya_flattened_line_20729                 16423 16 -     67322 TT----T--CA---------T-------------------C-A-AA-ATC----TGT
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           18144 16 -    119109 TT----T--TG---------T-------------------C-A-A-GATC----TGT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              4353 16 +      5897 TT----T--TG---------T-------------------CAA-A--ATC----TGT
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_624065                               1217 16 +      2112 TT----T--TG---------T-------------------CAA-A--ATC----TGT
i Hylobates_agilis.k141_624065                          C 0 C 0
s Hylobates_klossii.k141_466549                             10793 16 +     11537 TT----T--TG---------T-------------------CAA-A--ATC----TGT
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14623898 16 -  25970782 TT----T--TG---------T-------------------CAA-A--ATC----TGT
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            1154 16 -      2977 TT----T--TG---------T-------------------CAA-A--ATC----TGT
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             33316 12 -     60944 ----------g---------t-------------------ttt-g--ttt----tgt
i Hylobates_pileatus_a.tarseq_592                         I 5 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     5319 16 +     22540 TT----T--TG---------T-------------------C-A-AA-ATC----TGT
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7125041 12 +  13083262 ----------T---------T-------------------C-A-AA-ATC----TGT
i Ictidomys_tridecemlineatus.JH393315.1                 I 2 C 0
s Indri_indri.k141_4418183                                    659 15 -      1457 TT----T--TG---------T-------------------C-A-A--ATA----TGT
i Indri_indri.k141_4418183                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               8157 16 +     17520 GC----T--TG---------T-------------------C-A-AA-ATC----TGT
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8564916 16 +  11848649 --------------------t------------------tt-a-t-aatatgtatgc
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               22777 16 +     37189 GC----T--TG---------T-------------------C-A-AA-ATC----TGT
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          49375 16 -    147782 TT----T--TG---------T-------------------CAA-A--ATC----TGT
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   113424 16 -    115756 TT----T--TG---------T-------------------C-A-AA-ATC----TGT
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258406398 14 - 285822530 TT----T--TG---------T-------------------C-A-A--ATA----TG-
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        23150 15 +     39228 TT----T--TG---------T-------------------C-A-A--ATA----TGT
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            52525 15 +     63517 TT----T--TG---------T-------------------C-A-A--ATA----TGT
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        77775 15 +    116806 TT----T--TG---------T-------------------C-C-A--ATA----TGT
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     30789 15 -     33031 TT----T--TG---------T-------------------C-A-A--ATA----TGT
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3085099 16 -   3498232 TT----T--TG---------T-------------------C-A-AA-ATC----TCT
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    12141 16 +     22452 TT----T--TG---------T-------------------T-A-AA-ATC----TAT
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            135110 16 +   3060487 GC----T--TG---------T-------------------C-A-AA-ATC----TGT
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19247524 16 +  19376315 TT----T--GG---------T-------------------CAA-A--ATC----TGT
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loxodonta_africana.GL010040.1                          20591249  6 -  62548349 -----------------------------------------------atc----tgt
i Loxodonta_africana.GL010040.1                         I 32 C 0
s Loris_lydekkerianus.k141_550999                            9907  5 +     84689 TT----T--TG----------------------------------------------
i Loris_lydekkerianus.k141_550999                       C 0 I 79
s Loris_tardigradus.ctg97                                 3777656  5 +   6799190 TT----T--TG----------------------------------------------
i Loris_tardigradus.ctg97                               C 0 I 79
s Lycaon_pictus.CM007556.1                               11087245 16 +  39895028 TC----T--TG---------T-------------------C-A-AA-ATC----TGC
i Lycaon_pictus.CM007556.1                              I 1 C 0
s Macaca_arctoides.k141_2201161                             19264 16 +     74745 TT----T--GG---------T-------------------CAA-A--ATC----TGT
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12705720 16 +  12821369 TT----T--GG---------T-------------------CAA-A--ATC----TGT
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                1365 16 -      3136 TT----T--GG---------T-------------------CAA-A--ATC----TGT
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           46182 16 +     63263 TT----T--GG---------T-------------------CAA-A--ATC----TGT
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                  885 16 -      2568 TT----T--GG---------T-------------------CAA-A--ATC----TGT
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 1471 16 -      7381 TT----T--GG---------T-------------------CAA-A--ATC----TGT
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  44689 16 -     79256 TT----T--GG---------T-------------------CAA-A--ATC----TGT
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196034797 16 + 196197964 TT----T--GG---------T-------------------CAA-A--ATC----TGT
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11444965 16 +  11645122 TT----T--GG---------T-------------------CAA-A--ATC----TGT
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   3636 16 -     46448 TT----T--GG---------T-------------------CAA-A--ATC----TGT
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                1308 16 -     13212 TT----T--GG---------T-------------------CAA-A--ATC----TGT
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 14989 16 -     55006 TT----T--GG---------T-------------------CAA-A--ATC----TGT
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43840106 16 +  43892939 TT----T--GG---------T-------------------CAA-A--ATC----TGT
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               16275 16 -     24607 TT----T--GG---------T-------------------CAA-A--ATC----TGT
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               3641 16 -     27140 TT----T--GG---------T-------------------CAA-A--ATC----TGT
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                700722 16 +    802869 TT----T--TG---------T-------------------T-A-AA-ATC----AGT
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 I 1
s Mandrillus_leucophaeus.scaffold125                     43436683 16 -  43563597 TT----T--GG---------T-------------------CAA-G--ATC----TGT
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4449509 16 -   4543643 TT----T--GG---------T-------------------CAA-A--ATC----TGT
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36872880 12 +  64221397 ----------T---------T-------------------C-A-AA-ATC----TGT
i Marmota_marmota.CZRN01000005.1                        I 2 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       63529 16 -    234502 TT----T--TG---------T-------------------C-A-AA-ATC----TGT
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433              108 17 -     87323 TC----T--TG---------T-------------------C-AAAA-ATC----TGT
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               11889 10 +     15977 ----------------------------------------A-C-AA-TTC----CAT
i Meriones_unguiculatus.MerUng_scaffold_52233           I 13 C 0
s Mesocricetus_auratus.KB708139.1                         1046080 29 -  26018355 TT----G--TA---------TT------tgcttgtaaaata-a-a-attc----tgc
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Microcebus_murinus.CM007691.1                          16509405 15 +  47401472 TT----T--Tg---------t-------------------c-a-a--ata----tgt
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               21820 16 -     32043 TT----T--TG---------T-------------------C-A-AA-ATC----TGT
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22819221 30 -  98408828 TT----G--CG--------TTT-T--GCTT-TCT--AAATA-A-AA-TCT----TGA
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8208815 16 +  10048721 TT----T--TG---------T-------------------C-A-AA-ATC----TGT
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            33470 16 +     45743 TT----T--GG---------T-------------------C-A-AA-ATC----TGT
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         1236 16 +     29742 TT----T--GG---------T-------------------CCA-A--ATC----TGT
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        10612 16 -    104932 TT----T--TG---------T-------------------C-A-AA-ATC----TCT
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     4795 15 +      8497 TT----T--TG---------T-------------------C-A-A--ATA----TGT
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 145545 16 +    154973 GC----T--TG---------T-------------------C-A-AA-ATC----TGT
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                160331 16 +    265003 TT----T--TT---------C-------------------C-A-AA-ATC----TGT
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 3713 16 -      4346 TT----T--TG---------T-------------------C-A-AA-ATC----TGT
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  144034 16 -    168139 TG----T--TA---------T-------------------C-A-AA-ATC----TGC
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          18691 16 -    100666 TT----T--TG---------T-------------------C-A-AA-ATC----TAT
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70765737  8 +  92629107 ----------------------------------------a-a-a-att------at
i Mus_caroli.LT608236.1                                 I 11 I 10
s Mus_musculus.chr16                                     75488774  8 +  98207768 ----------------------------------------a-a-a-att------at
i Mus_musculus.chr16                                    I 10 C 0
s Mus_pahari.LT608305.1                                  67555010  8 +  89017189 ----------------------------------------a-a-a-att------at
i Mus_pahari.LT608305.1                                 I 11 C 0
s Mus_spretus.CM004110.1                                 74329953  8 +  97876770 ----------------------------------------a-a-a-att------at
i Mus_spretus.CM004110.1                                I 10 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             10803 16 +     98495 tt----t--cT---------C-------------------C-C-AA-ATC----TCT
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4423473 17 -  28371801 TT----T--TG---------T-------------------C-AAAA-ATC----TAT
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     89200 16 -    117718 CT----T--TG---------T-------------------C-A-AA-ATC----TGT
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               966986 16 +   8389877 TT----T--TG---------T-------------------C-A-AA-ATC----TGT
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5018662 16 +   6462685 TT----T--TG---------T-------------------C-A-AA-ATC----TGT
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3464566 16 -   3747815 TT----T--TG---------T-------------------C-A-AA-ATC----TGT
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         9781 16 +     66751 TT----T--TG---------T-------------------C-A-AA-ATC----TGT
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             4192 16 -      8794 TT----T--TG---------T-------------------C-A-AA-ATC----TGT
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            117558 40 +    362372 gt----t--tttcttattgtt----tttgttattatttatc-a-AA-TTA----TAT
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               7738 16 +     48152 TT----T--TG---------T-------------------CAA-A--GTC----TGT
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4484004 16 -  14209539 TT----T--TG---------T-------------------C-A-AA-ATC----TCT
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3950159 16 -   4490290 GC----T--TG---------T-------------------C-A-AA-ATC----TGT
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  48434 16 +     94413 TT----T--TA---------T-------------------C-C-AA-ATC----TTC
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_302224                            1195 16 +      1516 TT----T--TG---------T-------------------CAA-A--ATC----TGT
i Nomascus_annamensis.k141_302224                       C 0 C 0
s Nomascus_concolor.k141_226614                               455 16 -      5092 TT----T--TG---------T-------------------CAA-A--ATC----TGT
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_642452                            1238 16 +      2851 TT----T--TG---------T-------------------CAA-A--ATC----TGT
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             24176 16 -  18771707 tt----t--tg---------t-------------------ttt-g--ttt----tgt
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  1876 16 +      4512 TT----T--TG---------T-------------------CAA-A--ATC----TGT
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                30050 16 +   3668941 TC----T--TG---------T-------------------C-A-AA-ATC----TGT
i Nyctereutes_procyonoides.CAJHUB010000786.1            I 1 C 0
s Nycticebus_bengalensis.LG16                            65566341  5 -  95554990 TT----T--TG----------------------------------------------
i Nycticebus_bengalensis.LG16                           C 0 I 79
s Nycticebus_coucang.k141_2051882                            3070  5 +      6470 TT----T--TG----------------------------------------------
i Nycticebus_coucang.k141_2051882                       C 0 I 79
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65668679  5 +  89412551 TT----T--TG----------------------------------------------
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 I 79
s Ochotona_princeps.JH802095.1                            4995223 20 -  23139505 ttgttgt--tg---------t-------------------t-a-c-aata----TGT
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3684741 16 +  10294119 tt----t--tg---------t-------------------c-a-a-aatc----tgt
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             678667 16 -   3126709 TT----T--TG---------T-------------------C-A-AA-ATC----TAT
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1078844 16 +   1425656 TT----G--TG---------T-------------------C-A-AA-ATC----TGT
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         36138 16 +     78940 TT----T--TG---------T-------------------C-A-AA-ATC----TGT
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  124478 30 +    145789 TT----A--TG--------TTT-T--GCTT-T--GAAAATA-A-AA-TCT----TGA
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  36279 30 +     62360 TT----G--TG--------ATT-T--GTTT-TT--AAAATA-A-AA-TTC----TGT
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7223842 16 -   7562323 GC----C--TG---------T-------------------C-A-AA-ATC----TGT
i Orcinus_orca.KB316965.1                               C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141875160 16 + 163896628 TT----T--TG---------T-------------------T-A-AA-ATC----TAT
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      307331 16 -    505867 TC----T--TG---------T-------------------C-A-AA-ATC----TGT
i Otocyon_megalotis.JAEUCK010005121.1                   I 1 C 0
s Otolemur_crassicaudatus.k141_321880                       38241  5 +     38679 TT----T--TG----------------------------------------------
i Otolemur_crassicaudatus.k141_321880                   C 0 I 79
s Otolemur_garnettii.GL873528.1                          18007669  5 -  38779656 TT----T--TG----------------------------------------------
i Otolemur_garnettii.GL873528.1                         C 0 I 78
s Ovis_aries.CM001582.2                                 134076404 16 - 275406953 TT----T--TG---------T-------------------C-A-AA-ATC----TGT
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      77618 16 +    140051 TT----T--TG---------T-------------------C-A-AA-ATC----TGT
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127573881 16 - 205426864 TT----T--TG---------T-------------------CAA-A--ATc----tgt
i Pan_paniscus.CM003386.1                               I 27 C 0
s Pan_troglodytes.CM009241.2                            120151034 16 - 196562556 TT----T--TG---------T-------------------CAA-A--ATc----tgt
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  33479 16 +    295523 TT----T--TG---------T-------------------C-A-AA-ATC----TGT
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3637215 16 +  18214204 TT----T--TG---------T-------------------C-A-AA-ATC----TGT
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5026874 16 -   6340057 TT----T--TG---------T-------------------C-A-AA-ATC----TGT
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1065265 16 -   1292953 TT----T--TG---------T-------------------C-A-AA-ATC----TGT
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188155474 16 - 188283584 TT----T--GG---------T-------------------CAA-A--ATc----tgt
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             3791 16 +      5367 TT----T--GG---------T-------------------CAA-A--ATC----TGT
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47512862 16 +  47705337 TT----T--GG---------T-------------------CAA-A--ATC----TGT
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 66840 16 -    104429 TT----T--GG---------T-------------------CAA-A--ATC----TGT
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    5372 16 +     14967 TT----T--GG---------T-------------------CAA-A--ATC----TGT
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 1233 16 -      7628 TT----T--GG---------T-------------------CAA-A--ATC----TGT
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    114907 16 -    135482 TT----T--TG---------C-------------------C-A-AA-ATC----TGT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           4656  5 -     23713 TT----T--TG----------------------------------------------
i Perodicticus_ibeanus.k141_117958                      C 0 I 79
s Perodicticus_potto.k141_713187                            23965  5 -     27972 TT----T--TG----------------------------------------------
i Perodicticus_potto.k141_713187                        C 0 I 79
s Perognathus_longimembris.PerPac_flattened_line_22291      42787 16 -     45160 TT----T--TG---------T-------------------C-A-AA-ACC----AGT
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4949511 30 -   8017169 tt----g--tct--------t------ttgtttttaaaata-a-a-attc----tgt
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    11678 16 -     36578 TT----T--TG---------T-------------------C-T-AA-ATC----AGT
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            120459 16 -    122454 GC----T--TG---------T-------------------C-A-AA-ATC----TGT
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1987485                           1260 16 -      5908 TT----T--TG---------T-------------------CAA-A--GTC----TGT
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       1880 16 -     17985 TT----T--TG---------T-------------------CAA-A--GTC----TGT
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            1247 16 +      7694 TT----T--TG---------T-------------------CAA-A--GTC----TGT
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26739725 16 +  26888534 TT----T--TG---------T-------------------CAA-A--GTc----tgt
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            96631 16 +    112873 TT----T--TG---------T-------------------C-A-AA-ATC----TGT
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             42857 16 -     61926 TT----T--TG---------T-------------------TGA-A--ATC----TGT
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        24288 16 +     78826 TT----T--TG---------T-------------------CGA-A--ATC----TGT
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              8237 16 -     15800 TT----T--TG---------T-------------------TGA-A--ATC----TGT
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        11435 16 -     16101 TT----T--TG---------T-------------------TGA-A--ATC----TGT
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          4744 16 +      9673 TT----T--TG---------T-------------------TGA-A--ATC----TGT
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13473740 16 -  19735023 TT----T--TG---------T-------------------TGA-A--ATC----TGT
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           12646 16 -     31692 TT----T--TG---------T-------------------TGA-A--ATC----TGT
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           4527 17 +     21690 CT----T--TG---------T-------------------C-A-AAAATC----TGT
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 I 1
s Plecturocebus_bernhardi.k141_959214                       22079 16 +     44506 TT----T--TG---------T-------------------CAA-A--ATC----TGC
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        22291 16 +     67491 TT----T--TG---------T-------------------CAA-A--ATC----TGC
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      12530 16 -     98129 TT----T--TG---------T-------------------CAA-A--ATC----TGC
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     22130 16 +    147771 TT----T--TG---------T-------------------CAA-A--ATC----TGC
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        22385 16 -     23762 TT----T--TG---------T-------------------CAA-A--ATC----TGC
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          2851 16 -     55515 TT----T--TG---------T-------------------CAA-A--ATC----TGC
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         22204 16 +    152463 TT----T--TG---------T-------------------CAA-A--ATC----TGC
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_miltoni.k141_841561                         11926 16 +    134592 TT----T--TG---------T-------------------CAA-A--ATC----TGC
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          22514 16 -     75465 TT----T--TG---------T-------------------CAA-A--ATC----TGC
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              186406 16 -    373494 TT----T--TG---------T-------------------CAA-A--ATc----tgt
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19807054 16 +  19899266 TT----T--TG---------T-------------------CAA-A--ATC----TGT
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               4982 16 -     15069 TT----T--TG---------T-------------------CAA-A--GTC----TGT
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              5116 16 +     14865 TT----T--TG---------T-------------------CAA-A--GTC----TGT
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                76529  6 +     78963 TT----T--TG---------T------------------------------------
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 I 10
s Prolemur_simus.MPIZ01000048.1                           6847779 14 +  12164890 TT----T--TG---------T-------------------C-A-A--Ata----tg-
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    667000 15 -   2312742 TT----T--Tg---------t-------------------c-a-a--ata----tgt
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         2827 15 +     11805 TT----T--TG---------T-------------------C-A-A--ATA----TGT
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           42163 15 +     52369 TT----T--TG---------T-------------------C-A-A--ATA----CGT
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         34551 15 -     44753 TT----T--TG---------T-------------------C-A-A--ATA----CGT
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            16473 15 +     27322 TT----T--TG---------T-------------------C-A-A--ATA----CGT
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       16109 15 -     53241 TT----T--TG---------T-------------------C-A-A--ATA----TGT
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         38381 15 -     48185 TT----T--TG---------T-------------------C-A-A--ATA----TGT
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           33411 32 +     77221 tt----ttttgt--------t------ttttttttttaaca-c-a-attc----GGT
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            2999 16 -     27784 TT----T--TG---------T-------------------C-A-AA-ATC----TGT
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        245782 17 -    344369 TT----T--TG---------T-------------------C-AAAA-ATC----TAT
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13245109 16 -  17261082 TT----T--TA---------T-------------------C-A-AA-ATC----AGt
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             603059 16 -   3946241 TT----T--TA---------T-------------------C-A-AA-ATC----agt
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131533459 16 - 161321710 TT----T--TG---------T-------------------C-A-AA-ATC----TGT
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             29100 16 +     56732 TT----T--TG---------T-------------------CAA-A--GTC----TGT
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6805591 16 +   6970761 TT----T--TG---------T-------------------CAA-A--GTC----TGT
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             4985 16 +     18040 TT----T--TG---------T-------------------CAA-A--GTC----TGT
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                14921 16 +     68503 TT----G--TG---------T-------------------C-A-AA-ATC----TGT
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13914711  8 +  90463843 ----------------------------------------a-a-a-ata------at
i Rattus_norvegicus.chr11                               I 13 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1786931 16 +   2252614 TT----T--TG---------T-------------------C-A-AA-ATC----GGT
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_1391695                           1213 16 -      1866 TT----T--TG---------T-------------------CAA-A--GTC----TGT
i Rhinopithecus_bieti.k119_1391695                      C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206376870 16 - 206558726 TT----T--TG---------T-------------------CAA-A--GTc----tgt
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44855770 16 -  45163003 TT----T--TG---------T-------------------CAA-A--GTC----TGT
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                18393 16 +    109198 TT----T--TG---------T-------------------C-A-AA-ATC----AGT
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       7084 16 +     12214 TT----T--TG---------T-------------------C-A-AA-ATC----TGT
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15671945 16 -  43202129 TT----T--TG---------T-------------------CAA-A--ATC----TGT
i Saimiri_boliviensis.NW_024100938.1                    I 1 C 0
s Saimiri_cassiquiarensis.k141_808270                        3862 16 +     34089 TT----T--TG---------T-------------------CAA-A--ATC----TGT
i Saimiri_cassiquiarensis.k141_808270                   I 1 C 0
s Saimiri_macrodon.k141_2087127                              3803 16 -     60842 TT----T--TG---------T-------------------CAA-A--ATC----TGT
i Saimiri_macrodon.k141_2087127                         I 1 C 0
s Saimiri_oerstedii.k141_841116                              3898 16 +     67014 TT----T--TG---------T-------------------CAA-A--ATC----TGT
i Saimiri_oerstedii.k141_841116                         I 1 C 0
s Saimiri_sciureus.k141_1947592                              3876 16 +     60816 TT----T--TG---------T-------------------CAA-A--ATC----TGT
i Saimiri_sciureus.k141_1947592                         I 1 C 0
s Saimiri_ustus.k141_1282476                                 3813 16 -     76454 TT----T--TG---------T-------------------CAA-A--ATC----TGT
i Saimiri_ustus.k141_1282476                            I 1 C 0
s Sapajus_apella.ctg10                                   17340538 16 -  30362882 TT----T--TG---------T-------------------CAA-A--ATC----TGT
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         19897 16 -     62485 TT----T--TG---------T-------------------CAA-A--ATC----TGT
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   31427 16 -    114521 CT----T--TG---------T-------------------C-A-AA-ATC----CAT
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        2597 16 +     15331 TT----T--TG---------T-------------------CAA-A--GTC----TGT
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       7994 16 +     20762 TT----T--TG---------T-------------------CAA-A--GTC----TGT
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         117992 16 +    130994 TT----T--TG---------T-------------------CAA-A--GTC----TGT
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           36783 16 +     46263 TT----T--TG---------T-------------------CAA-A--GTC----TGT
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     29897 16 +     42640 TT----T--TG---------T-------------------CAA-A--GTC----TGT
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        12941 16 +     30600 TT----T--TG---------T-------------------CAA-A--GTC----TGT
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   99477 29 -    120886 -T----G--TG--------TTT-TAT-TTT-T---AAAATA-A-AA-TTC----AGT
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            17994 16 +    739146 TT----T--TG---------T-------------------C-A-GA-ATG----CAT
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2238961 12 +   2842873 ----------T---------T-------------------C-A-AA-ATC----TGT
i Spermophilus_dauricus.KZ294190.1                      I 2 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             233907 16 -    276980 TT----T--TG---------T-------------------G-A-AA-ATC----TAT
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            26698 16 +     62062 TT----T--TA---------T-------------------C-G-AA-ATC----TGC
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189270989 16 + 218635234 TT----T--TG---------T-------------------C-A-AA-ATC----TGT
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        14155 16 -  13920577 TT----T--TG---------T-------------------CAA-A--ATC----TGT
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               5156 16 -      6213 TT----T--TG---------T-------------------C-A-AA-ATC----TGT
i Tadarida_brasiliensis.TadBra_scaffold_145589          I 26 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               13869 16 +     45698 TT----T--TG---------T-------------------C-A-AA-ATC----TGT
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      805859 16 +   1148477 TT----T--TG---------T-------------------C-A-AA-ATC----TGT
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  56516 16 +     99546 TT----T--TG---------A-------------------C-A-AA-ATC----TGT
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               25675 14 +     42269 TT----T--TG---------T-------------------CAA-A--ATC----T--
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               58991 14 +     65473 TT----T--TG---------T-------------------CAA-A--ATC----T--
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194007001 16 - 194193292 TT----T--GG---------T-------------------CAA-A--ATc----tgt
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             38492 16 -     47444 TT----T--TG---------T-------------------C-A-AA-ATC----AGT
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  4713 16 +      6782 TT----T--TG---------T-------------------C-A-AA-ATC----TGT
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  135005 16 -    259118 TT----T--TG---------T-------------------C-A-AA-ATC----TGT
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        26104 16 +     38948 TT----T--TG---------T-------------------CAA-A--GTC----TGT
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   19831 16 -     32910 TT----T--TG---------T-------------------CAA-A--GTC----TGT
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      1218 16 -     12939 TT----T--TG---------T-------------------CAA-A--GTC----TGT
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       1153 16 -     14244 TT----T--TG---------T-------------------CAA-A--GTC----TGT
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           42551 16 -     54611 TT----T--TG---------T-------------------CAA-A--GTC----TGT
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                         357 16 -     11566 TT----T--TG---------T-------------------CAA-A--GTC----TGT
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     2529 16 -     15592 TT----T--TG---------T-------------------CAA-A--GTC----TGT
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          1186 16 +     14371 TT----T--TG---------T-------------------CAA-A--GTC----TGT
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  50938 16 +     51589 TT----T--TG---------T-------------------CAA-A--GTC----TGT
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       14119 16 +     14732 TT----T--TG---------T-------------------CAA-A--GTC----TGT
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       4591 16 -     28054 TT----T--TG---------T-------------------CAA-A--GTC----TGT
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44659391 16 -  44834318 TT----T--TG---------T-------------------CAA-A--GTC----TGT
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       1694 16 +     13828 TT----T--TG---------T-------------------CAA-A--GTC----TGT
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   4298 16 +     90398 TC----T--TG---------T-------------------C-A-G-TATC----TGT
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16081701  6 +  31416278 -----------------------------------------------atc----tgt
i Trichechus_manatus.JH594618.1                         I 10 C 0
s Tursiops_truncatus.MRVK01000923.1                      69312559 16 -  96451834 GC----T--TG---------T-------------------C-A-AA-ATC----TGT
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                    434 16 +     10241 TT----T--TG---------T-------------------T-A-AA-ATC----TCT
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6513915 16 +  28682327 TT----T--CG---------T-------------------C-A-AA-ATC----TAT
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  4485 15 -     20643 TT----T--TG---------T-------------------C-A-A--ATA----TGT
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             24026 15 -     33872 TT----T--TG---------T-------------------C-A-A--ATA----TGT
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1523798 16 -   2331223 TT----T--TG---------T-------------------C-A-AA-ATC----TGT
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                137428 16 -    281493 TC----T--TG---------T-------------------C-A-AA-ATC----TGT
i Vulpes_lagopus.VulLag_flattened_line_2045             I 1 C 0
s Xerus_inauris.XerIna_scaffold_7898                       126063 12 -    134049 ----------T---------T-------------------C-A-AA-ATC----TGT
i Xerus_inauris.XerIna_scaffold_7898                    I 3 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        213393 16 -    227762 TT----T--TG---------T-------------------C-A-AA-ATC----TAT
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           6054 16 -      8775 GC----T--TG---------T-------------------C-A-AA-ATC----TGT
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Sorex_araneus.JH798170.1                               17750754 3364 -  27805282 I
e Dinomys_branickii.DinBra_scaffold_1996                   156356 54 +    228994 I
e Erinaceus_europaeus.JH835290.1                         11531598 1064 +  16010500 I
e Orycteropus_afer.OryAfe_flattened_line_13509              43378 16 -     66828 I
e Microgale_talazaci.MicTal_scaffold_34660                  30638 409 -     48017 I
e Manis_pentadactyla.KN017078.1                             35015 87 +     58827 I
e Manis_javanica.JSZB01003966.1                            144940 87 +    252755 I
e Elephantulus_edwardii.JH947210.1                        7804622 10712 +  15467074 I
e Echinops_telfairi.JH980316.1                           22994192 422 -  44670279 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     14107 296 -     20485 I
e Tupaia_tana.TupTan_flattened_line_68454                    4094 206 +     13056 I
e Tupaia_chinensis.KB320831.1                             2791839 261 -   3938065 I
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               11157  8 +    209709 A----TA----------------T------------------------A----T--------------GT
s Acinonyx_jubatus.LLWD01000356.1                         2033138  5 +   3721120 A----tg----------------t------------------------a---------------------
i Acinonyx_jubatus.LLWD01000356.1                       C 0 I 2
s Acomys_cahirinus.AcoCah_scaffold_1625                    111816  5 -    189883 A----CA----------------C------------------------A---------------------
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 I 7
s Ailuropoda_melanoleuca.LNAT01000321.1                  10656455  8 +  23371972 A----TA----------------T------------------------C----A--------------GC
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 I 4
s Ailurus_fulgens.LNAC01000003.1                          7093580  8 -  16596857 A----TA----------------C------------------------A----A--------------GC
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   12183  8 -     22067 A----TG----------------T------------------------A----T--------------AG
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                    508  8 -     60446 A----TA----------------T------------------------A----T--------------GT
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         1229  8 -     29318 A----TA----------------T------------------------A----T--------------GT
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                          166  8 +     38766 A----TA----------------T------------------------A----T--------------GT
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          1123  8 -     80423 A----TA----------------T------------------------A----T--------------GT
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             9422  8 -     18050 A----CA----------------T------------------------A----C--------------GT
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                 10512  8 -     11521 A----CA----------------T------------------------A----C--------------GT
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                             10099  8 -     21359 A----CA----------------T------------------------A----C--------------GT
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_298055                                 1393  8 +      1823 A----CA----------------T------------------------A----C--------------GT
i Alouatta_juara.k141_298055                            C 0 C 0
s Alouatta_macconnelli.k141_1331706                          9395  8 -     10438 A----CA----------------T------------------------A----C--------------GT
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            6051  8 +      7047 A----CA----------------T------------------------A----C--------------GT
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             9331  8 +     10410 A----CA----------------T------------------------A----C--------------AT
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            3139  8 -      4927 A----CA----------------T------------------------A----C--------------GT
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             6068  8 +      6429 A----CA----------------T------------------------A----C--------------GT
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3519278  8 +   4113121 T----TA----------------C------------------------A----A--------------CC
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      389451 10 -    631301 A----TA----------------C----------------------AAA----C--------------AC
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 I 6
s Antilocapra_americana.AntAmePen_scaffold_42841            29860  8 +     33004 T----TA----------------C------------------------A----A--------------TC
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 61781  8 +     78111 A----CA----------------T------------------------A----C--------------AT
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            4722  8 +     22701 A----CA----------------T------------------------A----A--------------AT
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5748679  8 +   9889416 a----ca----------------t------------------------a----c--------------at
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             5266  8 -    104377 A----CA----------------T------------------------A----C--------------AT
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               5268  8 +     23246 A----CA----------------T------------------------A----C--------------AT
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     2910  8 +      5067 A----TA----------------T------------------------A----T--------------GG
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 7854 10 -     29036 A----TA----------------T----------------------AAA----C--------------AC
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 I 6
s Ateles_geoffroyi_b.tarseq_2582                             9538527  8 +  39197703 A----CA----------------T------------------------A----C--------------AT
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             59798  8 +     85812 A----CA----------------T------------------------A----C--------------AT
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                10810  8 +     89302 A----CA----------------T------------------------A----C--------------AT
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             15315  8 -     58268 A----CA----------------T------------------------A----C--------------AT
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             63306  8 +    119057 A----CA----------------T------------------------A----C--------------AT
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               5275  8 -     25888 A----CA----------------T------------------------A----C--------------AT
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 5913  8 -     16375 A----TA----------------T------------------------A----A--------------AT
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              2233  8 +      2719 A----TA----------------T------------------------A----A--------------AT
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26379295  8 +  51448160 T----TA----------------C------------------------A----a--------------gc
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        4526  8 -     13118 T----TA----------------C------------------------A----a--------------gc
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   42341  8 -     72089 T----TA----------------C------------------------A----A--------------CC
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6558903  8 +   6870073 t----ta----------------c------------------------A----A--------------CC
i Bison_bison.KN264915.1                                I 251 C 0
s Bos_indicus.CM003021.1                                138139119  8 - 161108492 t----ta----------------c------------------------A----A--------------CC
i Bos_indicus.CM003021.1                                I 241 C 0
s Bos_mutus.JH883513.1                                     571581  8 -    998990 t----ta----------------c------------------------A----A--------------CC
i Bos_mutus.JH883513.1                                  I 251 C 0
s Bos_taurus.CM000177.6                                 136294852  8 - 158972876 t----ta----------------c------------------------A----A--------------CC
i Bos_taurus.CM000177.6                                 I 241 C 0
s Bubalus_bubalis.KI419065.1                              1230619  8 -   1914593 t----ta----------------c------------------------a----A--------------CC
i Bubalus_bubalis.KI419065.1                            I 241 C 0
s Cacajao_ayresi.k141_724503                               113168  8 -    171031 A----CA----------------T------------------------A----C--------------AT
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 12196  8 +    125063 A----CA----------------T------------------------A----C--------------AT
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                14241  8 -    216513 A----CA----------------T------------------------A----C--------------AT
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        6781  8 -    134917 A----CA----------------T------------------------A----C--------------AT
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3218706  8 -   8989139 t----ta----------------c------------------------a----t--------------gc
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           396411  8 -  15254737 T----TA----------------C------------------------a----t--------------gc
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2972144  8 +   6889770 T----TA----------------C------------------------a----t--------------gc
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11518604  8 +  39901454 A----TA----------------T------------------------A----A--------------GC
i CanFam4.chr31                                         C 0 I 3
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   13629  8 +     87036 A----TA----------------T------------------------A----A--------------GC
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 I 3
s Canis_lupus_dingo.QKWQ01001993.1                       11265271  8 -  35597290 a----ta----------------t------------------------a----a--------------gc
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 I 3
s Canis_lupus_familiaris.chr31                           11087805  8 +  39895921 a----ta----------------t------------------------a----a--------------gc
i Canis_lupus_familiaris.chr31                          C 0 I 3
s Canis_lupus_orion.HG994411.1                           16454820  8 -  44759192 a----ta----------------t------------------------a----a--------------gc
i Canis_lupus_orion.HG994411.1                          C 0 I 3
s Capra_aegagrus.CM003214.1                              21324354  8 + 157394656 T----TA----------------C------------------------A----A--------------CC
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135705581  8 - 157403528 T----TA----------------C------------------------A----A--------------CC
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_979108                  1155 10 -      1248 G----TG----------------T------------------------G----G------------GGGG
i Capromys_pilorides.CapPil_scaffold_979108             C 0 C 0
s Carlito_syrichta.NW_007248099.1                          308205  8 +    345090 A----TA----------------C------------------------A----C--------------AA
i Carlito_syrichta.NW_007248099.1                       C 0 I 2
s Carollia_perspicillata.CarPer_scaffold_4436               58652 10 +     67245 A----TA----------------T----------------------AAA----C--------------AC
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 I 6
s Castor_canadensis.CasCan_scaffold_47037                   29899  8 +     33760 A----CA----------------T------------------------A----T--------------GG
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   157917  8 -    276539 T----TA----------------T------------------------A----A--------------GC
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 I 5
s Cavia_aperea.AVPZ01000278.1                            15785785  8 -  24422027 G----TT----------------T------------------------G----T--------------GG
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15797719  8 -  24440124 G----TA----------------T------------------------G----T--------------GG
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       175910  8 +    436027 G----TA----------------T------------------------G----T--------------GG
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18890011  8 -  29618158 A----CA----------------T------------------------A----C--------------GT
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 7555  8 -     26817 A----CA----------------T------------------------A----C--------------GT
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                11795  8 +     25043 A----CA----------------T------------------------A----C--------------GT
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         7238  8 +     21754 A----TA----------------C------------------------A----C--------------AA
i Cephalopachus_bancanus.k141_702587                    C 0 I 2
s Ceratotherium_simum.JH767818.1                          4363019  8 +   7569818 a----ta----------------t------------------------a----a--------------gc
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         2771  8 -      9338 A----TA----------------T------------------------A----A--------------GC
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6554451  8 +   6739814 a----ta----------------t------------------------a----t--------------gt
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      25928  8 +     60454 A----TA----------------T------------------------A----T--------------GT
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          1133  8 -     21101 A----TA----------------T------------------------A----T--------------GT
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         58443  8 -    107033 A----TA----------------T------------------------A----T--------------GT
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        1335  8 -     17608 A----TA----------------T------------------------A----T--------------GT
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          28830  8 +     30494 A----TA----------------T------------------------A----T--------------GT
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          57676  8 -     59240 A----TA----------------T------------------------A----T--------------GT
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          1377  8 +     16677 A----TA----------------T------------------------A----T--------------GT
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           23535  8 +     35983 A----TA----------------T------------------------A----T--------------GT
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11990063  8 +  12117833 A----TA----------------T------------------------A----T--------------GT
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46476821  8 +  46592721 A----TA----------------T------------------------A----T--------------GT
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      40372  8 -     45581 A----TA----------------T------------------------A----T--------------GT
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       1378  8 +     35577 A----TA----------------T------------------------A----T--------------GT
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        1154  8 -     25661 A----TA----------------T------------------------A----C--------------GT
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        1132  8 -     17744 A----TA----------------T------------------------A----T--------------GT
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        20748  8 +     37128 A----TA----------------T------------------------A----T--------------GT
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           1969  8 -      6963 A----TA----------------T------------------------A----T--------------GC
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           58210  8 -     68416 A----TA----------------T------------------------A----A--------------AT
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            7253  8 +     13308 A----TA----------------T------------------------A----A--------------AT
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             4811  8 -     18223 G----CA----------------T------------------------A----C--------------GT
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             21834  8 +     25473 G----CA----------------T------------------------A----C--------------GT
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           40869  8 +     57117 G----CA----------------T------------------------A----C--------------GT
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          45548  8 +     54541 G----CA----------------T------------------------A----C--------------GG
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15960932  8 +  43084221 A----TA----------------T------------------------A----T--------------GG
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         70370  8 +    196370 A----CA----------------T------------------------A----C--------------AT
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          14550  8 +     40510 A----CA----------------T------------------------A----C--------------AT
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15138294  8 -  15256731 A----TA----------------T------------------------A----T--------------GT
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      33341  8 -     53260 A----TA----------------T------------------------A----T--------------GT
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101143905  8 + 101219884 a----ta----------------t------------------------a----t--------------gt
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                15646  8 -     21363 A----TA----------------T------------------------A----A--------------GA
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           760954  8 +    964067 A----TA----------------T------------------------a----a--------------ga
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10885671  8 +  10971483 a----ta----------------t------------------------a----t--------------gt
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147663835  8 + 156195979 A----TA----------------T------------------------A----T--------------GT
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            15820  8 +     23629 A----TA----------------T------------------------A----T--------------GT
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60612638  8 +  78930452 a----ta----------------t------------------------a----a--------------at
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         38736  8 -     40477 A----TA----------------T------------------------A----A--------------AC
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 I 2
s Cricetomys_gambianus.CriGam_scaffold_949                 277724 12 -    399297 A----TA----------------T------------------------AAGTAT--------------TA
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53028399 12 +  72327488 A----TG----------------T------------------------AACTAT--------------TA
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            51148  8 -     70449 A----TG----------------T------------------------A----A--------------GC
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  207347  8 -    956709 A----TG----------------T------------------------G----G--------------GG
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 I 2
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 29933  8 -     67205 A----TG----------------T------------------------G----T--------------GG
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                16942  7 +     26546 A-----A----------------T------------------------G----T--------------GA
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             58032  8 -    236241 A----TA----------------T------------------------G----T--------------GA
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          182807  8 -   6883506 A----TA----------------A------------------------A----T--------------gc
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16844069  8 +  31942871 A----TA----------------T------------------------A----A--------------GT
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80035973  8 -  96802777 T----TA----------------C------------------------a----a--------------gc
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18697961 10 -  18957592 A----TA----------------T----------------------AAA----C--------------AC
i Desmodus_rotundus.KZ672188.1                          C 0 I 6
s Dicerorhinus_sumatrensis.PEKH010003161.1                 321666  8 +    993696 A----Ca----------------t------------------------a----a--------------gc
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   2318  8 +    151128 A----TA----------------T------------------------A----A--------------GC
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dipodomys_ordii.KN672545.1                              3655326  8 +   4240102 G----TA----------------T------------------------G----T--------------Gg
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 26959  8 +     28912 G----TA----------------T------------------------G----T--------------GG
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                35281  8 -     73477 G----TA----------------T------------------------G----T--------------GG
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Eidolon_helvum.KE772537.1                                 11324  8 +     24177 A----TA----------------T------------------------A----A--------------AC
i Eidolon_helvum.KE772537.1                             C 0 I 2
s Elaphurus_davidianus.JRFZ01086400.1                     1490629  8 +   1727528 T----TA----------------C------------------------A----A--------------CC
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        238958 12 -    369425 A----TG----------------T------------------------AAGTAT--------------TA
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           6071 12 -      7838 A----TG----------------T------------------------AAGTAT--------------TA
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85871311  8 +  99434291 A----TA----------------C------------------------A----A--------------GC
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4703346  8 +   6522550 A----Ta----------------c------------------------a----a--------------gc
i Eptesicus_fuscus.JH977687.1                           C 0 I 7
s Equus_asinus.JREZ01000062.1                             5852071  8 -   7175178 A----TA----------------T------------------------A----A--------------GC
i Equus_asinus.JREZ01000062.1                           C 0 I 2
s Equus_caballus.CM000402.2                              13350574  8 +  41866177 A----TA----------------T------------------------A----A--------------GC
i Equus_caballus.CM000402.2                             C 0 I 2
s Equus_przewalskii.ATBW01073585.1                          12064  8 +     92910 A----TA----------------T------------------------A----A--------------GC
i Equus_przewalskii.ATBW01073585.1                      C 0 I 2
s Erythrocebus_patas.Contig8                             48770472  8 -  48907691 A----TA----------------T------------------------A----T--------------GT
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          314179  8 +    330699 T----TA----------------C------------------------A----A--------------GC
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             60633  8 +     89355 T----TA----------------C------------------------A----A--------------GC
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              4254  8 +     13586 A----TA----------------T------------------------A----A--------------AT
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               4191  8 -      6809 A----TA----------------T------------------------A----A--------------AT
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            10664  8 +     36558 A----TA----------------T------------------------A----A--------------AT
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             6983  8 +     60246 A----TA----------------T------------------------A----A--------------AT
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                10462  8 +    109717 A----TA----------------T------------------------A----A--------------AT
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               14845  8 +     16540 A----TA----------------T------------------------A----A--------------AT
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                15118  8 +     27497 A----TA----------------T------------------------A----A--------------AT
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           17575  8 +     26808 A----TA----------------T------------------------A----A--------------AT
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                32310  8 +     46535 A----TA----------------T------------------------A----A--------------AT
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              15032  8 -     29447 A----TA----------------T------------------------A----A--------------AT
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129892113  8 - 159252932 A----Tg----------------t------------------------a----a--------------gc
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129279182  8 - 158578461 A----Tg----------------t------------------------a----a--------------gc
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 20327  8 +     52776 A----TG----------------T------------------------A----A--------------GC
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               155463  8 +    324696 A----AA----------------T------------------------A----A--------------GT
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    180428  8 -    189561 T----TA----------------C------------------------A----C--------------CC
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           12304  8 -     18683 G----TA----------------T------------------------A----T--------------GG
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               4537  8 -     14630 A----TA----------------T------------------------A----T--------------GT
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119651636  8 - 195582420 a----ta----------------t------------------------a----t--------------gt
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   76794  8 +    118900 G----TG----------------C------------------------A----G--------------AG
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         1054  5 +     10286 -----------------------T------------------------A----A--------------AT
i Hapalemur_alaotrensis.k141_1280836                    C 0 I 1
s Hapalemur_gilberti.k141_1254239                            9230  5 +      9690 -----------------------T------------------------A----A--------------AT
i Hapalemur_gilberti.k141_1254239                       C 0 I 1
s Hapalemur_griseus.k141_1387522                             4859  5 +     56096 -----------------------T------------------------A----A--------------AT
i Hapalemur_griseus.k141_1387522                        C 0 I 1
s Hapalemur_meridionalis.k141_186231                        28109  5 -     42470 -----------------------T------------------------A----A--------------AT
i Hapalemur_meridionalis.k141_186231                    C 0 I 1
s Hapalemur_occidentalis.k141_797938                        44733  5 -     54384 -----------------------T------------------------A----A--------------AT
i Hapalemur_occidentalis.k141_797938                    C 0 I 1
s Helogale_parvula.HelPar_flattened_line_22962              16354  8 +     53719 A----TG----------------T------------------------A----A--------------TT
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                26626  8 -     91191 T----TA----------------C------------------------A----A--------------CC
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2550265  8 +  31725842 A----TA----------------T------------------------G----T--------------GG
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               56681  8 +     73687 A----CA----------------T------------------------A----T--------------GC
i Heterohyrax_brucei.HetBruBak_scaffold_25354           I 10 I 8
s Hippopotamus_amphibius.HipAmp_scaffold_1308              146253  8 +    277961 T----TA----------------C------------------------A----A--------------GC
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      277546  8 -    477199 A----ta----------------t------------------------a----a--------------gt
i Hipposideros_armiger.JXIK01001085.1                   C 0 I 2
s Hipposideros_galeritus.HipGal_scaffold_104691              6698  8 -      9143 A----TA----------------T------------------------A----A--------------GT
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 I 2
s Hoolock_leuconedys.ctg649                                   102966  8 +    115816 A----TA----------------T------------------------A----T--------------GT
i Hoolock_leuconedys.ctg649                                I 112 I 57
s Hyaena_hyaena.HyaHya_flattened_line_20729                 16439  8 -     67322 A----TA----------------T------------------------A----A--------------GC
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           18160  8 -    119109 G----TA----------------T------------------------G----T--------------GG
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              4369  8 +      5897 A----TA----------------T------------------------A----T--------------GT
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_624065                               1233  8 +      2112 A----TA----------------T------------------------A----T--------------GT
i Hylobates_agilis.k141_624065                          C 0 C 0
s Hylobates_klossii.k141_466549                             10809  8 +     11537 A----TA----------------T------------------------A----T--------------GT
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14623914  8 -  25970782 A----TA----------------T------------------------A----T--------------GT
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            1170  8 -      2977 A----TA----------------T------------------------A----T--------------GT
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             33328  5 -     60944 -----------------------t------------------------t----t--------------gt
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     5335  8 +     22540 A----TA----------------T------------------------G----T--------------GG
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7125053 10 +  13083262 A----TG----------------T----------------------ATG----T--------------GC
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_4418183                                    674  8 -      1457 A----TA----------------T------------------------A----A--------------AT
i Indri_indri.k141_4418183                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               8173  8 +     17520 T----TA----------------C------------------------A----A--------------GC
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8564932  8 +  11848649 a----tg----------------t------------------------a----t--------------gg
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               22793  8 +     37189 T----TA----------------G------------------------A----A--------------GC
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          49391  8 -    147782 A----CA----------------T------------------------A----C--------------AT
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   113440  8 -    115756 A----CA----------------C------------------------A----A--------------GC
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 I 10
s Lemur_catta.scaffold_1                                258406412  5 - 285822530 -----------------------T------------------------A----A--------------AT
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        23165  8 +     39228 A----TA----------------T------------------------A----A--------------AT
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            52540  8 +     63517 A----TA----------------T------------------------A----A--------------AT
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        77790  8 +    116806 A----TA----------------T------------------------A----A--------------AT
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     30804  8 -     33031 A----TA----------------T------------------------A----A--------------AT
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3085115  8 -   3498232 A----TA----------------T------------------------A----A--------------GC
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    12157  7 +     22452 A----TA----------------T------------------------A----A--------------G-
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            135126  8 +   3060487 T----TA----------------C------------------------a----a--------------gc
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19247540  8 +  19376315 A----TA----------------T------------------------A----T--------------GT
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loxodonta_africana.GL010040.1                          20591255  8 -  62548349 a----ca----------------t------------------------a----c--------------ac
i Loxodonta_africana.GL010040.1                         C 0 I 5
s Lycaon_pictus.CM007556.1                               11087261  8 +  39895028 a----ta----------------t------------------------a----a--------------gc
i Lycaon_pictus.CM007556.1                              C 0 I 3
s Macaca_arctoides.k141_2201161                             19280  8 +     74745 A----TA----------------T------------------------A----C--------------GT
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12705736  8 +  12821369 A----TA----------------T------------------------A----C--------------GT
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                1381  8 -      3136 A----TA----------------T------------------------A----C--------------GT
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           46198  8 +     63263 A----TA----------------T------------------------A----C--------------GT
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                  901  8 -      2568 A----TA----------------T------------------------A----C--------------GT
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 1487  8 -      7381 A----TA----------------T------------------------A----C--------------GT
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  44705  8 -     79256 A----TA----------------T------------------------A----C--------------GT
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196034813  8 + 196197964 A----TA----------------T------------------------A----C--------------GT
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11444981  8 +  11645122 A----TA----------------T------------------------A----C--------------GT
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   3652  8 -     46448 A----TA----------------T------------------------A----C--------------GT
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                1324  8 -     13212 A----TA----------------T------------------------A----C--------------GT
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 15005  8 -     55006 A----TA----------------T------------------------A----C--------------GT
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43840122  8 +  43892939 A----TA----------------T------------------------A----C--------------GT
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               16291  8 -     24607 A----TA----------------T------------------------A----A--------------GT
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               3657  8 -     27140 A----TA----------------T------------------------A----C--------------GT
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                700739  5 +    802869 -----------------------T------------------------A----A--------------AC
i Macroglossus_sobrinus.MacSob_scaffold_879             I 1 I 2
s Mandrillus_leucophaeus.scaffold125                     43436699  8 -  43563597 A----TA----------------T------------------------A----T--------------GT
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4449525  8 -   4543643 A----TA----------------T------------------------A----T--------------GT
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36872892 10 +  64221397 A----TG----------------T----------------------ATG----T--------------AC
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       63545  8 -    234502 A----TA----------------T------------------------A----A--------------GC
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 I 2
s Mellivora_capensis.MelCap_flattened_line_15433              125  8 -     87323 A----TA----------------T------------------------A----A--------------GA
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               11899 21 +     15977 A----CA----------------T------------------------AAGTAT-----TATTATTATTA
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1046109 12 -  26018355 a----CA----------------T------------------------AACTAT--------------TA
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Microcebus_murinus.CM007691.1                          16509420  8 +  47401472 a----ta----------------t------------------------a----a--------------at
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               21836 10 -     32043 A----TA----------------G----------------------AAA----C--------------AC
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 I 6
s Microtus_ochrogaster.CM001673.1                        22819251 12 -  98408828 A----TG----------------T------------------------AAGTAT--------------TA
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8208831  8 +  10048721 a----ta----------------a------------------------g----c--------------at
i Miniopterus_natalensis.LDJU01000022.1                 C 0 I 9
s Miniopterus_schreibersii.MinSch_scaffold_24116            33486  8 +     45743 A----TA----------------A------------------------G----C--------------AT
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 I 6
s Miopithecus_ogouensis.k141_2935907                         1252  8 +     29742 A----TA----------------T------------------------A----T--------------GT
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        10628  8 -    104932 A----TA----------------T------------------------A----A--------------GC
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     4810  8 +      8497 A----TA----------------T------------------------A----A--------------AT
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 145561  8 +    154973 T----TA----------------C------------------------A----A--------------GC
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                160347 10 +    265003 A----CA----------------T----------------------AAG----C--------------AT
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 I 6
s Moschus_moschiferus.MosMos_scaffold_146101                 3729  8 -      4346 T----TA----------------C------------------------A----A--------------CC
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  144050  8 -    168139 A----TG----------------T------------------------A----A--------------GT
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          18707  8 -    100666 A----TA----------------C------------------------A----A--------------GA
i Murina_feae.MurFea_scaffold_2254                      C 0 I 6
s Mus_caroli.LT608236.1                                  70765755 22 +  92629107 ------------------------------------------------atgtatatatgtatatatataa
i Mus_caroli.LT608236.1                                 I 10 C 0
s Mus_musculus.chr16                                     75488782 60 +  98207768 a----tatacatacatacatacatacatacatatacatatat------gtgtatatatatatatatataa
i Mus_musculus.chr16                                    C 0 I 3
s Mus_pahari.LT608305.1                                  67555018 44 +  89017189 a----tgt--gt--gt------gt--gt--gtgt--gt----gtgt--gtacatatatgtatatatatag
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74329961 56 +  97876770 a----ta--cataca--------tacatacatatacatatatgtgtatatatatgtatatatatatataa
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             10819  8 +     98495 G----TA----------------T------------------------G----T--------------GT
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4423490  8 -  28371801 A----TA----------------C------------------------A----A--------------GC
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     89216  8 -    117718 C----TG----------------T------------------------G----T--------------GG
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               967002  8 +   8389877 A----TA----------------C------------------------A----A--------------GC
i Myotis_brandtii.KE161952.1                            C 0 I 6
s Myotis_davidii.KB114863.1                               5018678  8 +   6462685 A----TA----------------C------------------------A----A--------------GC
i Myotis_davidii.KB114863.1                             C 0 I 6
s Myotis_lucifugus.GL429887.1                             3464582  8 -   3747815 A----TA----------------C------------------------A----A--------------GC
i Myotis_lucifugus.GL429887.1                           C 0 I 6
s Myotis_myotis.MyoMyo_scaffold_6123                         9797  8 +     66751 A----TA----------------C------------------------A----A--------------GC
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 I 6
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             4208  8 -      8794 A----CA----------------T------------------------A----A--------------GC
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            117598 13 +    362372 A----at----------------t------------------------gagtgt----g---------tg
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               7754  8 +     48152 A----TA----------------T------------------------A----T--------------GT
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4484020  8 -  14209539 A----TA----------------T------------------------A----A--------------GC
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3950175  8 -   4490290 T----TA----------------C------------------------A----a--------------gc
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  48450 10 +     94413 A----TA----------------C----------------------AAG----C--------------AC
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 I 6
s Nomascus_annamensis.k141_302224                            1211  8 +      1516 A----TA----------------T------------------------A----T--------------GT
i Nomascus_annamensis.k141_302224                       C 0 C 0
s Nomascus_concolor.k141_226614                               471  8 -      5092 A----TA----------------T------------------------C----T--------------GT
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_642452                            1254  8 +      2851 A----TA----------------T------------------------C----T--------------GT
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             24192  5 -  18771707 -----------------------t------------------------t----t--------------gt
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  1892  8 +      4512 A----TA----------------T------------------------A----T--------------GT
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                30066  8 +   3668941 a----ta----------------t------------------------a----a--------------gc
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 I 3
s Ochotona_princeps.JH802095.1                            4995243  8 -  23139505 G----TG----------------T------------------------A----A--------------GT
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3684757  8 +  10294119 g----ca----------------t------------------------g----t--------------gg
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             678683  8 -   3126709 A----TA----------------T------------------------A----A--------------GC
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1078860  8 +   1425656 T----TA----------------C------------------------A----A--------------AC
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         36154  8 +     78940 T----TA----------------C------------------------A----A--------------CC
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  124508 12 +    145789 A----TG----------------T------------------------AAGTAT--------------TA
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  36309 12 +     62360 G----TA----------------T------------------------AAGTAT--------------TG
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7223858  8 -   7562323 T----TA----------------C------------------------a----a--------------gc
i Orcinus_orca.KB316965.1                               C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141875176  8 + 163896628 A----TA----------------T------------------------G----A--------------GA
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      307347  8 -    505867 a----ta----------------t------------------------a----a--------------gc
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 I 3
s Ovis_aries.CM001582.2                                 134076420  8 - 275406953 T----TA----------------C------------------------A----A--------------CC
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      77634  8 +    140051 T----TA----------------C------------------------A----A--------------CC
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127573897  8 - 205426864 a----ta----------------t------------------------a----t--------------gt
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120151050  8 - 196562556 a----ta----------------t------------------------a----t--------------gt
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  33495  8 +    295523 A----TG----------------T------------------------A----A--------------GC
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3637231  8 +  18214204 A----Tg----------------t------------------------a----a--------------gc
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5026890  8 -   6340057 A----Tg----------------t------------------------a----a--------------gc
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1065281  8 -   1292953 T----TA----------------C------------------------A----A--------------TC
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188155490  8 - 188283584 a----ta----------------t------------------------a----t--------------gt
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             3807  8 +      5367 A----TA----------------T------------------------A----T--------------GT
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47512878  8 +  47705337 A----TA----------------T------------------------A----T--------------GT
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 66856  8 -    104429 A----TA----------------T------------------------A----T--------------GT
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    5388  8 +     14967 A----TA----------------T------------------------A----T--------------GT
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 1249  8 -      7628 A----TA----------------T------------------------A----T--------------GT
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    114923  8 -    135482 A----TG----------------T------------------------A----G--------------AC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      42803  8 -     45160 A----CA----------------T------------------------G----T--------------GG
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4949541 12 -   8017169 g----ta----------------T------------------------AAGTAT--------------TG
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    11694  4 -     36578 A----TA----------------A----------------------------------------------
i Petromus_typicus.PetTyp_scaffold_33007                C 0 I 3
s Phocoena_phocoena.PhoPho_flattened_line_11948            120475  8 -    122454 T----TA----------------C------------------------A----A--------------GA
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1987485                           1276  8 -      5908 A----TA----------------T------------------------A----T--------------GT
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       1896  8 -     17985 A----TA----------------T------------------------A----T--------------GT
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            1263  8 +      7694 A----TA----------------T------------------------A----T--------------GT
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26739741  8 +  26888534 a----ta----------------t------------------------a----t--------------gt
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            96647  8 +    112873 A----TA----------------C------------------------A----A--------------GT
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 I 10
s Pithecia_albicans.k141_991845                             42873  8 -     61926 A----CA----------------T------------------------A----C--------------AT
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        24304  8 +     78826 A----CA----------------T------------------------A----C--------------AT
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              8253  8 -     15800 A----CA----------------T------------------------A----C--------------AT
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        11451  8 -     16101 A----CA----------------T------------------------A----C--------------AT
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          4760  8 +      9673 A----CA----------------T------------------------A----C--------------AT
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13473756  8 -  19735023 A----CA----------------T------------------------A----C--------------AT
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           12662  8 -     31692 A----CA----------------T------------------------A----C--------------AT
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           4545  8 +     21690 T----TA----------------C------------------------A----A--------------GC
i Platanista_gangetica.PlaMin_flattened_line_72990      I 1 C 0
s Plecturocebus_bernhardi.k141_959214                       22095  8 +     44506 A----CA----------------T------------------------A----C--------------AT
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        22307  8 +     67491 A----CA----------------T------------------------A----C--------------AT
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      12546  8 -     98129 A----CA----------------T------------------------A----C--------------AT
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     22146  8 +    147771 A----CA----------------T------------------------A----C--------------AT
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        22401  8 -     23762 A----CA----------------T------------------------A----C--------------AT
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          2867  8 -     55515 A----CA----------------T------------------------A----A--------------AT
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         22220  8 +    152463 A----CA----------------T------------------------A----C--------------AT
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_miltoni.k141_841561                         11942  8 +    134592 A----CA----------------T------------------------A----C--------------AT
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          22530  8 -     75465 A----CA----------------T------------------------A----C--------------AT
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              186422  8 -    373494 a----ta----------------t------------------------a----t--------------gt
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19807070  8 +  19899266 A----TA----------------T------------------------A----T--------------GT
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               4998  8 -     15069 A----TA----------------T------------------------A----T--------------GT
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              5132  8 +     14865 A----TA----------------T------------------------A----T--------------GT
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                76545  8 +     78963 A----CA----------------T------------------------A----C--------------AC
i Procavia_capensis.ProCapCap_scaffold_15315            I 10 I 8
s Prolemur_simus.MPIZ01000048.1                           6847793  5 +  12164890 -----------------------t------------------------a----a--------------at
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    667015  8 -   2312742 a----ta----------------t------------------------a----a--------------at
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         2842  8 +     11805 A----TA----------------T------------------------A----A--------------AT
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           42178  8 +     52369 A----TA----------------T------------------------A----A--------------AT
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         34566  8 -     44753 A----TA----------------T------------------------A----A--------------AT
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            16488  8 +     27322 A----TA----------------T------------------------A----A--------------AT
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       16124  8 -     53241 A----TA----------------T------------------------A----A--------------AT
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         38396  8 -     48185 A----TA----------------T------------------------A----A--------------AT
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           33443 21 +     77221 A----Ca----------------t------------------------aagtgt-tat-tat-tat--ta
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            3015 10 -     27784 A----TA----------------T----------------------AAG----T--------------AC
i Pteronotus_parnellii.KE867983.1                       C 0 I 3
s Pteronura_brasiliensis.PteBra_flattened_line_1343        245799  8 -    344369 A----TA----------------C------------------------A----A--------------GC
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13245125  8 -  17261082 a----ta----------------t------------------------a----a--------------ac
i Pteropus_alecto.KB031157.1                            C 0 I 2
s Pteropus_vampyrus.KN525959.1                             603075  8 -   3946241 a----ta----------------t------------------------a----a--------------ac
i Pteropus_vampyrus.KN525959.1                          C 0 I 3
s Puma_concolor.QAVW01000427.1                          131533475  8 - 161321710 a----tg----------------t------------------------a----a--------------gt
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             29116  8 +     56732 A----TA----------------T------------------------A----T--------------GT
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6805607  8 +   6970761 A----TA----------------T------------------------A----T--------------GT
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             5001  8 +     18040 A----TA----------------T------------------------A----T--------------GT
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                14937  8 +     68503 T----TA----------------C------------------------A----A--------------CC
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13914719  3 +  90463843 a----ta---------------------------------------------------------------
i Rattus_norvegicus.chr11                               C 0 I 9
s Rhinolophus_sinicus.LVEH01000179.1                      1786947  8 +   2252614 A----TA----------------T------------------------a----a--------------gc
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 I 2
s Rhinopithecus_bieti.k119_1391695                           1229  8 -      1866 A----TA----------------T------------------------A----T--------------GT
i Rhinopithecus_bieti.k119_1391695                      C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206376886  8 - 206558726 a----ta----------------t------------------------a----t--------------gt
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44855786  8 -  45163003 A----TA----------------T------------------------A----T--------------GT
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                18409  8 +    109198 T----TA----------------T------------------------A----A--------------AT
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 I 3
s Saiga_tatarica.SaiTat_scaffold_82192                       7100  8 +     12214 T----TG----------------C------------------------A----A--------------CC
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15671961  8 -  43202129 A----TA----------------T------------------------A----T--------------AT
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        3878  8 +     34089 A----TA----------------T------------------------A----T--------------AT
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              3819  8 -     60842 A----TA----------------T------------------------A----T--------------AT
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              3914  8 +     67014 A----TA----------------T------------------------A----T--------------AT
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              3892  8 +     60816 A----TA----------------T------------------------A----T--------------AT
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 3829  8 -     76454 A----TA----------------T------------------------A----T--------------AT
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17340554  8 -  30362882 A----CA----------------T------------------------A----C--------------GT
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         19913  8 -     62485 A----CA----------------T------------------------A----C--------------GT
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   31443  8 -    114521 A----TA----------------T------------------------C----A--------------AC
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        2613  8 +     15331 A----TA----------------T------------------------A----T--------------GT
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       8010  8 +     20762 A----TA----------------T------------------------A----T--------------GT
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         118008 12 +    130994 ATATATA----------------T------------------------A----T--------------GT
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           36799  8 +     46263 A----TA----------------T------------------------A----T--------------GT
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     29913  8 +     42640 A----TA----------------T------------------------A----T--------------GT
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        12957  8 +     30600 A----TA----------------T------------------------A----T--------------GT
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   99506 12 -    120886 A----TA----------------T------------------------AAGTAT--------------TT
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            18010  8 +    739146 A----TG----------------T------------------------C----A--------------AC
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2238973 10 +   2842873 A----TG----------------T----------------------ATG----T--------------AC
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             233923  8 -    276980 A----TA----------------T------------------------A----A--------------GC
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            26714  8 +     62062 A----TG----------------T------------------------A----A--------------GT
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189271005  8 + 218635234 T----TG----------------T------------------------A----A--------------GT
i Sus_scrofa.CM000824.4                                 C 0 I 5
s Symphalangus_syndactylus.tarseq_24                        14171  8 -  13920577 A----TA----------------T------------------------A----T--------------GT
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               5172  8 -      6213 A----TA----------------A------------------------G----C--------------AT
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               13885  8 +     45698 A----TA----------------T------------------------A----A--------------GC
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      805875  8 +   1148477 A----TA----------------T------------------------A----A--------------GC
i Tapirus_indicus.TapInd_scaffold_176                   C 0 I 162
s Tapirus_terrestris.TapTer_scaffold_14939                  56532  8 +     99546 A----TA----------------T------------------------A----A--------------GC
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 I 196
s Tarsius_lariang.k141_609102                               25689  8 +     42269 G----TA----------------C------------------------A----C--------------AA
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               59005  8 +     65473 G----TA----------------C------------------------A----C--------------AA
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194007017  8 - 194193292 a----tg----------------t------------------------a----t--------------gt
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             38508  8 -     47444 A----TA----------------T------------------------G----C--------------TG
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  4729  8 +      6782 A----TA----------------T------------------------A----T--------------GC
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  135021 10 -    259118 A----TA----------------T----------------------AAA----C--------------AC
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 I 6
s Trachypithecus_auratus.k141_738098                        26120  8 +     38948 A----TA----------------T------------------------A----T--------------GT
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   19847  8 -     32910 A----TA----------------T------------------------A----T--------------GT
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      1234  8 -     12939 A----TA----------------T------------------------A----T--------------GT
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       1169  8 -     14244 A----TA----------------T------------------------A----T--------------GT
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           42567  8 -     54611 A----TA----------------T------------------------A----T--------------GT
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                         373  8 -     11566 A----TA----------------T------------------------A----T--------------GT
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     2545  8 -     15592 A----TA----------------T------------------------A----T--------------GT
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          1202  8 +     14371 A----TA----------------T------------------------A----T--------------GT
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  50954  8 +     51589 A----TA----------------T------------------------A----T--------------GT
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       14135  8 +     14732 A----TA----------------T------------------------A----T--------------GT
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       4607  8 -     28054 A----TA----------------T------------------------A----T--------------GT
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44659407  8 -  44834318 A----TA----------------T------------------------A----T--------------GT
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       1710  8 +     13828 A----TA----------------T------------------------A----T--------------GT
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   4314  8 +     90398 T----CA----------------G------------------------A----A--------------GC
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16081707  8 +  31416278 a----ta----------------t------------------------a----a--------------ac
i Trichechus_manatus.JH594618.1                         C 0 I 5
s Tupaia_chinensis.KB320831.1                             2792100  1 -   3938065 --------------------------------------------------------------------G-
i Tupaia_chinensis.KB320831.1                           I 261 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    4300  1 +     13056 --------------------------------------------------------------------G-
i Tupaia_tana.TupTan_flattened_line_68454               I 206 C 0
s Tursiops_truncatus.MRVK01000923.1                      69312575  8 -  96451834 T----TA----------------C------------------------a----a--------------gc
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                    450  8 +     10241 A----TA----------------T------------------------A----T--------------AC
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6513931  8 +  28682327 A----TA----------------T------------------------A----A--------------GC
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  4500  8 -     20643 A----TA----------------T------------------------A----A--------------AT
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             24041  8 -     33872 A----TA----------------T------------------------A----A--------------AT
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1523814  8 -   2331223 T----TA----------------C------------------------a----c--------------gc
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                137444  8 -    281493 A----TA----------------T------------------------A----A--------------GC
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 I 3
s Xerus_inauris.XerIna_scaffold_7898                       126075 10 -    134049 A----TA----------------T----------------------ATA----T--------------AC
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        213409  8 -    227762 A----TA----------------T------------------------A----A--------------GC
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           6070  8 -      8775 T----TA----------------C------------------------A----A--------------GC
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Sorex_araneus.JH798170.1                               17750754 3364 -  27805282 I
e Dinomys_branickii.DinBra_scaffold_1996                   156356 54 +    228994 I
e Erinaceus_europaeus.JH835290.1                         11531598 1064 +  16010500 I
e Orycteropus_afer.OryAfe_flattened_line_13509              43378 16 -     66828 I
e Microgale_talazaci.MicTal_scaffold_34660                  30638 409 -     48017 I
e Manis_pentadactyla.KN017078.1                             35015 87 +     58827 I
e Manis_javanica.JSZB01003966.1                            144940 87 +    252755 I
e Elephantulus_edwardii.JH947210.1                        7804622 10712 +  15467074 I
e Echinops_telfairi.JH980316.1                           22994192 422 -  44670279 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     14107 296 -     20485 I
e Perodicticus_potto.k141_713187                            23970 79 -     27972 I
e Perodicticus_ibeanus.k141_117958                           4661 79 -     23713 I
e Otolemur_garnettii.GL873528.1                          18007674 78 -  38779656 I
e Otolemur_crassicaudatus.k141_321880                       38246 79 +     38679 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65668684 79 +  89412551 I
e Nycticebus_coucang.k141_2051882                            3075 79 +      6470 I
e Nycticebus_bengalensis.LG16                            65566346 79 -  95554990 I
e Loris_tardigradus.ctg97                                 3777661 79 +   6799190 I
e Loris_lydekkerianus.k141_550999                            9912 79 +     84689 I
e Galagoides_demidoff.k141_1769638                           9597 79 +     27357 I
e Galago_senegalensis.k141_964197                           12529 70 -     43889 I
e Galago_moholi.ctg555                                     210150 70 -    847004 I
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I
e Arctocebus_calabarensis.k141_587554                         266 79 +      9265 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               11165 17 +    209709 T-----T----------T--------CTT----------------------TT-T---------AAG---GGC-AA
s Acinonyx_jubatus.LLWD01000356.1                         2033145 21 +   3721120 t----tt-------ttgt--------ttg----------------------tt-t---------aag---ggc-TA
i Acinonyx_jubatus.LLWD01000356.1                       I 2 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10656467  3 +  23371972 ------------------------------------------------------------------------T-CA
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 4 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    111828  8 -    189883 TT----T----------G--------TTT----------------------T------------------------
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 7 C 0
s Ailurus_fulgens.LNAC01000003.1                          7093588 21 -  16596857 TT----TAT-------GT--------TTG----------------------TT-T---------AAG---GGT-CA
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   12191 18 -     22067 TT----T----------G--------GAT----------------------CT-G---------AAG---GGT-CA
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                    516 17 -     60446 T-----T----------T--------CTT----------------------TT-C---------AAG---GGT-CA
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         1237 17 -     29318 T-----T----------T--------CTT----------------------TT-T---------AAG---GGT-CA
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                          174 17 +     38766 T-----T----------T--------CTT----------------------TT-T---------AAG---GGT-CA
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          1131 17 -     80423 T-----T----------T--------CTT----------------------TT-T---------AAG---GGT-CA
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             9430 17 -     18050 T-----C----------T--------CTC----------------------AT-T---------AAG---AGT-CA
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                 10520 17 -     11521 T-----C----------T--------CTC----------------------AT-T---------AAG---AGT-CA
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                             10107 17 -     21359 T-----C----------T--------CTC----------------------AT-T---------AAG---AGT-CA
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_298055                                 1401 17 +      1823 T-----C----------T--------CTC----------------------AT-T---------AAG---AGT-CA
i Alouatta_juara.k141_298055                            C 0 C 0
s Alouatta_macconnelli.k141_1331706                          9403 17 -     10438 T-----C----------T--------CTC----------------------AT-T---------AAG---AGT-CA
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            6059 17 +      7047 T-----C----------T--------CTC----------------------AT-T---------AAG---AGT-CA
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             9339 17 +     10410 T-----C----------T--------CTC----------------------AT-T---------AAG---AGT-CA
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            3147 17 -      4927 T-----C----------T--------CTC----------------------AT-T---------AAG---AGT-CA
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             6076 17 +      6429 T-----C----------T--------CTC----------------------AT-T---------AAG---AGT-CA
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3519286 21 +   4113121 AT----TTTT-------A--------TTG----------------------TT-T---------GAG---GGT-CA
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      389467 14 -    631301 --------------------------TTG----------------------TT-T---------GAG---GGT-TA
i Anoura_caudifer.AnoCau_scaffold_422                   I 6 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            29868 21 +     33004 AT----TTTT-------A--------CTG----------------------TT-T---------GAG---GGT-CA
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 61789 17 +     78111 T-----A----------T--------CTC----------------------AT-T---------AAG---AGT-CA
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            4730 17 +     22701 T-----A----------T--------CTC----------------------AT-T---------AAG---AGT-CA
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5748687 17 +   9889416 t-----a----------t--------ctc----------------------at-t---------aag---AGT-CA
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             5274 17 -    104377 T-----A----------T--------CTC----------------------AT-T---------AAG---AGT-CA
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               5276 17 +     23246 T-----A----------T--------CTC----------------------AT-T---------AAG---AGT-CA
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     2918 18 +      5067 T--C--T----------G--------TTT----------------------TT-T---------AAG---AGT-CC
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 7870 14 -     29036 --------------------------TTG----------------------CT-T---------GAG---GGT-TA
i Artibeus_jamaicensis.ArtJam_scaffold_41619            I 6 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9538535 17 +  39197703 T-----C----------T--------CTC----------------------AT-T---------AAG---AGT-CA
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             59806 17 +     85812 T-----C----------T--------CTC----------------------AT-T---------AAG---AGT-CA
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                10818 17 +     89302 T-----C----------T--------CTC----------------------AT-T---------AAG---AGT-CA
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             15323 17 -     58268 T-----C----------T--------CTC----------------------AT-T---------AAG---AGT-CA
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             63314 17 +    119057 T-----C----------T--------CTC----------------------AT-T---------AAG---AGT-CA
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               5283 17 -     25888 T-----C----------T--------CTC----------------------AT-T---------AAG---AGT-CA
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 5921 18 -     16375 T-----G----------T--------TTT----------------------TT-T--------AAAG---GGT-CA
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              2241 18 +      2719 T-----G----------T--------TTT----------------------TT-T--------AAAG---GGT-CA
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26379303 22 +  51448160 a----tt------tttta--------ttg----------------------tt-t---------gag---gGT-CC
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        4534 22 -     13118 a----tt------tttta--------ttg----------------------tt-t---------gag---gGT-CC
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   42349 21 -     72089 AT----TTTT-------A--------TTG----------------------TT-T---------GAG---GGT-CC
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6558911 21 +   6870073 AT----TTTT-------A--------TTG----------------------TT-T---------GAG---GGT-CA
i Bison_bison.KN264915.1                                C 0 I 112
s Bos_indicus.CM003021.1                                138139127 21 - 161108492 AT----TTTT-------A--------TTG----------------------TT-T---------GAG---GGT-CA
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     571589 21 -    998990 AT----TTTT-------G--------TTG----------------------TT-T---------GAG---AGT-CA
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136294860 21 - 158972876 AT----TTTT-------A--------TTG----------------------TT-T---------GAG---GGT-CA
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1230627 21 -   1914593 AT----TTTT-------A--------TTG----------------------TT-T---------GAG---GGT-CA
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               113176 17 -    171031 T-----C----------T--------CTC----------------------AT-T---------AAG---AGT-CA
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 12204 17 +    125063 T-----C----------T--------CTC----------------------AT-T---------AAG---AGT-CA
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                14249 17 -    216513 T-----C----------T--------CTC----------------------AT-T---------AAG---AGT-CA
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        6789 17 -    134917 T-----C----------T--------CTC----------------------AT-T---------AAG---AGT-CA
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3218714 27 -   8989139 a----tt-tttttcttat--------ttg----------------------tt-t---------gaa---GGT-CA
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           396419 26 -  15254737 a----tt--ttttcttat--------ttg----------------------tt-t---------gaa---GGT-CA
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2972152 26 +   6889770 a----tt--ttttcttat--------ttg----------------------tt-t---------gaa---GGT-CA
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11518615 14 +  39901454 --------------------------TTA----------------------TT-T---------AAG---GTT-CA
i CanFam4.chr31                                         I 3 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   13640 14 +     87036 --------------------------TTA----------------------TT-T---------AAG---GTT-CA
i Canis_lupus_VD.CanFam_VD_scaffold_16982               I 3 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11265282 14 -  35597290 --------------------------tta----------------------tt-t---------aag---GTT-CA
i Canis_lupus_dingo.QKWQ01001993.1                      I 3 C 0
s Canis_lupus_familiaris.chr31                           11087816 14 +  39895921 --------------------------tta----------------------tt-t---------aag---GTT-CA
i Canis_lupus_familiaris.chr31                          I 3 C 0
s Canis_lupus_orion.HG994411.1                           16454831 14 -  44759192 --------------------------tta----------------------tt-t---------aag---GTT-CA
i Canis_lupus_orion.HG994411.1                          I 3 C 0
s Capra_aegagrus.CM003214.1                              21324362 21 + 157394656 AT----TTTT-------A--------TTG----------------------TT-T---------GAG---GGT-CA
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135705589 21 - 157403528 AT----TTTT-------A--------TTG----------------------TT-T---------GAG---GGT-CA
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_979108                  1165 18 -      1248 TT----T----------G--------TTT----------------------TC-T---------AAG---GAT-CA
i Capromys_pilorides.CapPil_scaffold_979108             C 0 C 0
s Carlito_syrichta.NW_007248099.1                          308215 14 +    345090 --------------------------TTT----------------------TT-T---------GAG---AGT-CA
i Carlito_syrichta.NW_007248099.1                       I 2 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               58668 14 +     67245 --------------------------TTG----------------------CT-T---------GAG---GGT-TA
i Carollia_perspicillata.CarPer_scaffold_4436           I 6 C 0
s Castor_canadensis.CasCan_scaffold_47037                   29907 19 +     33760 TT----T----------G--------TTT---------------------TTG-C---------AAG---AGT-AA
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   157930  8 -    276539 ----------------------------G----------------------TT-T---------G-------T-TA
i Catagonus_wagneri.CatWag_scaffold_1305                I 5 C 0
s Cavia_aperea.AVPZ01000278.1                            15785793 18 -  24422027 TT----T----------G--------TTT----------------------TC-T---------AAG---TAT-CA
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15797727 18 -  24440124 TT----T----------G--------TTT----------------------TC-T---------AAG---TAT-CA
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       175918 18 +    436027 TT----T----------G--------TTT----------------------TC-T---------AAG---TAT-CA
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18890019 17 -  29618158 T-----C----------T--------CTC----------------------AT-T---------AAG---AGT-TA
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 7563 17 -     26817 T-----C----------T--------CTC----------------------AT-T---------AAG---AGT-TA
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                11803 17 +     25043 T-----C----------T--------CTC----------------------AT-T---------AAG---AGT-TA
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         7248 14 +     21754 --------------------------TTT----------------------TT-T---------GAG---AGT-CA
i Cephalopachus_bancanus.k141_702587                    I 2 C 0
s Ceratotherium_simum.JH767818.1                          4363027 19 +   7569818 ------t-------tttt--------ttt----------------------tc-t---------aaa---ggt-cA
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         2779 19 -      9338 ------TTTT-------T--------TTT----------------------TC-T---------AAA---GGT-CA
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6554459 17 +   6739814 t-----t----------t--------ctt----------------------tt-t---------aag---ggt-CA
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      25936 17 +     60454 T-----T----------T--------CTT----------------------TT-T---------AAG---GGT-CA
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          1141 17 -     21101 T-----T----------T--------CTT----------------------TT-T---------AAG---GGT-CA
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         58451 17 -    107033 T-----T----------T--------CTT----------------------TT-T---------AAG---GGT-CA
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        1343 17 -     17608 T-----T----------T--------CTT----------------------TT-C---------AAG---GGT-CA
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          28838 17 +     30494 T-----T----------T--------CTT----------------------TT-C---------AAG---GGT-CA
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          57684 17 -     59240 T-----T----------T--------CTT----------------------TT-C---------AAG---GGT-CA
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          1385 17 +     16677 T-----T----------T--------CTT----------------------TT-C---------AAG---GGT-CA
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           23543 17 +     35983 T-----T----------T--------CTT----------------------TT-C---------AAG---GGT-CA
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11990071 17 +  12117833 T-----T----------T--------CTT----------------------TT-C---------AAG---GGT-CA
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46476829 17 +  46592721 T-----T----------T--------CTT----------------------TT-C---------AAG---GGT-CA
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      40380 17 -     45581 T-----T----------T--------CTT----------------------TT-C---------AAG---GGT-CA
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       1386 17 +     35577 T-----T----------T--------CTT----------------------TT-C---------AAG---GGT-CA
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        1162 17 -     25661 T-----T----------T--------CTT----------------------TT-C---------AAG---GGT-CA
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        1140 17 -     17744 T-----T----------T--------CTT----------------------TT-C---------AAG---GGT-CA
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        20756 17 +     37128 T-----T----------T--------CTT----------------------TT-C---------AAA---GGT-CA
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           1977 28 -      6963 TT----TTTT-------GAATTA---TTT---------------------TTTTA---------AAA---GAT-CA
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           58218 18 -     68416 T-----G----------T--------TTT----------------------TT-T--------AAAG---GGT-CA
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            7261 18 +     13308 T-----G----------T--------TTT----------------------TT-T--------AAAG---GGT-CA
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             4819 17 -     18223 T-----C----------T--------CTC----------------------AT-T---------AAG---AGT-CA
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             21842 17 +     25473 T-----C----------T--------CTC----------------------AT-T---------AAG---AGT-CA
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           40877 17 +     57117 T-----C----------T--------CTC----------------------AT-T---------AAG---AGT-CA
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          45556 17 +     54541 T-----C----------T--------CTC----------------------AT-T---------AAG---AGT-CA
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15960940 18 +  43084221 TT----T----------G--------TTT----------------------TC-T---------AAA---GAT-CA
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         70378 17 +    196370 T-----C----------T--------CTC----------------------AT-T---------AAG---AGT-CA
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          14558 17 +     40510 T-----C----------T--------CTC----------------------AT-T---------AAG---AGT-CA
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15138302 17 -  15256731 T-----T----------T--------CTT----------------------TT-T---------AAG---GGT-CA
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      33349 17 -     53260 T-----T----------T--------CTT----------------------TT-T---------AAG---GGT-CA
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101143913 17 + 101219884 t-----t----------t--------ctt----------------------tt-t---------aag---ggt-CA
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                15654 31 -     21363 TT----TTGCTTTT--ATTTTAA---TTT----------------------TC-A---------TTG---GGT-CA
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           760962 30 +    964067 t----tt---tgatttat---tttaattt----------------------tc-a---------ttg---ggT-CA
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10885679 17 +  10971483 t-----t----------t--------ctt----------------------tt-t---------aag---ggt-CA
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147663843 17 + 156195979 T-----T----------T--------CTT----------------------TT-T---------AAG---GGT-CA
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            15828 17 +     23629 T-----T----------T--------CTT----------------------TT-T---------AAG---GGT-CA
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60612646 21 +  78930452 t----tc-------tttG--------CTG----------------------TT-T---------AAA---AGT-CA
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         38746 28 -     40477 CT----TTTTTTTTTCAC--------TTG----------------------TT-T---------AAA---TGT-Ca
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     I 2 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 277736  8 -    399297 TT----T----------G--------TTT----------------------T------------------------
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53028411  8 +  72327488 TT----T----------G--------TCT----------------------T------------------------
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            51156 21 -     70449 TT----TTT-------GT--------TTG----------------------TT-T---------AAA---AGT-TA
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  207357 14 -    956709 --------------------------TTA----------------------TC-T---------AAT---TGT-CA
i Ctenodactylus_gundi.CteGun_scaffold_447               I 2 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 29941 18 -     67205 TT----T----------G--------TTT----------------------TC-T---------GAA---GAT-CA
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                16949 18 +     26546 TT----T----------G--------TTT----------------------TC-T---------AAG---GAT-CA
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             58040 18 -    236241 CT----T----------G--------TTT----------------------TC-T---------AAG---GAT-CA
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          182815 27 -   6883506 t----tt-------attg---aattattt----------------------ttca---------aag---GAT-TG
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16844077 18 +  31942871 T-----G----------T--------TTC----------------------TT-T--------AAAG---GGT-CA
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80035981 22 -  96802777 a----tt------tttta--------ttg----------------------tt-t---------gag---gGT-CC
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18697977 14 -  18957592 --------------------------TTG----------------------TT-T---------GAG---GGT-TA
i Desmodus_rotundus.KZ672188.1                          I 6 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 321674 21 +    993696 a----gt-------tttt--------ttt----------------------tt-t---------aaa---ggt-ca
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   2326 19 +    151128 ------TTTT-------T--------TTT----------------------TC-T---------AAA---GGT-CA
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dipodomys_ordii.KN672545.1                              3655334 19 +   4240102 c----tt----------a--------ttg-t--------------------tt-t---------taa---agt-tt
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 26967 19 +     28912 CT----T----------A--------TTG---------------------TTT-T---------TAA---AGT-TT
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                35289 18 -     73477 TT----T----------G--------TTT----------------------TC-T---------AAG---GAT-CA
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Eidolon_helvum.KE772537.1                                 11334 21 +     24177 CT----TT-------CTT--------TTG----------------------TT-T---------GAG---GGT-CA
i Eidolon_helvum.KE772537.1                             I 2 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1490637 21 +   1727528 AT----TTTT-------A--------CTG----------------------CT-T---------GAG---GGT-CA
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        238970  8 -    369425 TT----T----------G--------TCT----------------------T------------------------
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           6083  8 -      7838 TT----T----------G--------TCT----------------------T------------------------
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85871319 24 +  99434291 TT----TGT-------GT--------TTG----------------------TT-T---------AAGGAGGGT-CA
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4703361 12 +   6522550 ----------------------------t----------------------tt-t---------aag---ggt-ta
i Eptesicus_fuscus.JH977687.1                           I 7 C 0
s Equus_asinus.JREZ01000062.1                             5852081 15 -   7175178 -----------------T--------CTT----------------------TT-T---------AAG---GGT-CA
i Equus_asinus.JREZ01000062.1                           I 2 C 0
s Equus_caballus.CM000402.2                              13350584 15 +  41866177 -----------------T--------CTT----------------------TG-T---------AAG---GGT-CA
i Equus_caballus.CM000402.2                             I 2 C 0
s Equus_przewalskii.ATBW01073585.1                          12074 15 +     92910 -----------------T--------CTT----------------------TG-T---------AAG---GGT-CA
i Equus_przewalskii.ATBW01073585.1                      I 2 C 0
s Erythrocebus_patas.Contig8                             48770480 17 -  48907691 T-----T----------T--------CTT----------------------TT-T---------AAG---GGT-CA
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          314187 22 +    330699 AT----TTTTT------A--------TTG----------------------TT-T---------GAG---GGT-CC
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             60641 22 +     89355 AT----TTTTT------A--------TTG----------------------TT-T---------GAG---GGT-CC
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              4262 19 +     13586 T-----G----------T--------TTT----------------------TTTTT--------AAG---GGT-CA
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               4199 19 -      6809 T-----G----------T--------TTT----------------------TTTT--------AAAG---GGT-CA
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            10672 19 +     36558 T-----G----------T--------TTT----------------------TTTT--------AAAG---GGT-CA
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             6991 19 +     60246 T-----G----------T--------TTT----------------------TTTT--------AAAG---GGT-CA
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                10470 19 +    109717 T-----G----------T--------TTT----------------------TTTT--------AAAG---GGT-CA
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               14853 19 +     16540 T-----G----------T--------TTT----------------------TTTT--------AAAG---GGT-CA
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                15126 19 +     27497 T-----G----------T--------TTT----------------------TTTT--------AAAG---GGT-CA
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           17583 19 +     26808 T-----G----------T--------TTT----------------------TTTT--------AAAG---GGT-CA
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                32318 19 +     46535 T-----G----------T--------TTT----------------------TTTT--------AAAG---GGT-CA
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              15040 19 -     29447 T-----G----------T--------TTT----------------------TTTT--------AAAG---GGT-CA
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129892121 21 - 159252932 t----tt-------ttgt--------ttg----------------------tt-t---------aag---ggt-TA
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129279190 21 - 158578461 t----tt-------ttgt--------ttg----------------------tt-t---------aag---ggt-TA
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 20335 21 +     52776 TT----TTT-------GT--------TTG----------------------TT-T---------AAG---GGT-TA
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               155471 27 +    324696 TT----T----------T--------TTT----------------------TT-TTGTTTCCCCAAG---GGT-CA
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    180436 21 -    189561 AT----TTTT-------A--------CTG----------------------TT-T---------GAG---GGT-CA
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           12312 18 -     18683 TT----T----------G--------GTT----------------------TA-C---------AGG---GGT-CA
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               4545 17 -     14630 T-----T----------T--------CTT----------------------TT-T---------AAG---GGT-CA
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119651644 17 - 195582420 t-----t----------t--------ctt----------------------tt-t---------aag---ggt-CA
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   76802 18 +    118900 GT----T----------G--------TTT----------------------TA-C---------AAG---AGA-CA
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         1060 15 +     10286 --------------------------TTT----------------------TT-T--------AAAG---GGT-CA
i Hapalemur_alaotrensis.k141_1280836                    I 1 C 0
s Hapalemur_gilberti.k141_1254239                            9236 15 +      9690 --------------------------TTT----------------------TT-T--------AAAA---GGT-CA
i Hapalemur_gilberti.k141_1254239                       I 1 C 0
s Hapalemur_griseus.k141_1387522                             4865 16 +     56096 -----------------T--------TTT----------------------TT-T--------AAAG---GGT-CA
i Hapalemur_griseus.k141_1387522                        I 1 C 0
s Hapalemur_meridionalis.k141_186231                        28115 16 -     42470 -----------------T--------TTT----------------------TT-T--------AAAG---GGT-CA
i Hapalemur_meridionalis.k141_186231                    I 1 C 0
s Hapalemur_occidentalis.k141_797938                        44739 15 -     54384 --------------------------TTT----------------------TT-T--------AAAG---GGT-CA
i Hapalemur_occidentalis.k141_797938                    I 1 C 0
s Helogale_parvula.HelPar_flattened_line_22962              16362 21 +     53719 TT----TTT-------GT--------TTG----------------------TT-T---------AAG---GCT-TA
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                26634 21 -     91191 AT----TTTT-------A--------CTG----------------------TT-T---------GAG---GGT-CA
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2550273 18 +  31725842 TT----T----------G--------TTT----------------------TC-T---------AAG---GAT-CA
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               56697 13 +     73687 ---------------------------TT----------------------TT-A---------TAT---AGC-TA
i Heterohyrax_brucei.HetBruBak_scaffold_25354           I 8 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              146261 23 +    277961 AT----TTTTTT-----A--------TTG----------------------TT-T---------CAG---GGT-CA
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      277556 21 -    477199 t----tt-------ttgt--------ttg----------------------tt-t---------aag---ggt-CA
i Hipposideros_armiger.JXIK01001085.1                   I 2 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              6708 21 -      9143 TT----TTT-------GT--------TTG----------------------TT-T---------AAG---GGT-CA
i Hipposideros_galeritus.HipGal_scaffold_104691         I 2 C 0
s Hoolock_leuconedys.ctg79                                      3951 17 -   7690867 T-----T----------T--------CTT----------------------TT-T---------AAG---GGT-CA
i Hoolock_leuconedys.ctg79                                 I 8 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 16447 21 -     67322 TT----TTT-------GT--------TTG----------------------TT-T---------AAG---GGT-TA
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           18168 18 -    119109 TT----T----------G--------TTT----------------------TC-T---------AAG---GAT-CA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              4377 17 +      5897 T-----T----------T--------CTT----------------------TT-T---------AAG---GGT-CA
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_624065                               1241 17 +      2112 T-----T----------T--------CTT----------------------TT-T---------AAG---GGT-CA
i Hylobates_agilis.k141_624065                          C 0 C 0
s Hylobates_klossii.k141_466549                             10817 17 +     11537 T-----T----------T--------CTT----------------------TT-T---------AAG---GGT-CA
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14623922 17 -  25970782 T-----T----------T--------CTT----------------------TT-T---------AAG---GGT-CA
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            1178 17 -      2977 T-----T----------T--------CTT----------------------TT-T---------AAG---GGT-CA
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             33333  8 -     60944 t-----t----------t--------gtt----------------------tt-----------------------
i Hylobates_pileatus_a.tarseq_592                         C 0 I 34
s Hystrix_cristata.HysCri_scaffold_50788                     5343 18 +     22540 AT----T----------A--------TTT----------------------TA-T---------AAG---GAT-CA
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7125063 18 +  13083262 TT----T----------G--------TCT----------------------TT-T---------AAA---GGG-CA
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_4418183                                    682 19 -      1457 T-----G----------T-------TTTT----------------------TT-TT--------AAG---GGT-CA
i Indri_indri.k141_4418183                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               8181 22 +     17520 AT----TTTTT------A--------TTG----------------------TT-T---------GAG---GGT-CC
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8564940 18 +  11848649 t----tT----------G--------TTT----------------------TT-G---------AAG---GGT-CA
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               22801 22 +     37189 AT----TTCTT------A--------TTG----------------------TT-T---------GAG---GGT-CC
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          49399 17 -    147782 T-----C----------T--------CTC----------------------AT-T---------AAG---AGT-CA
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   113458 13 -    115756 ---------------------------TG----------------------TT-T---------AAG---GAC-TA
i Lasiurus_borealis.LasBor_scaffold_5102                I 10 C 0
s Lemur_catta.scaffold_1                                258406417 18 - 285822530 T-----G----------T--------TTT----------------------TT-T--------AAAG---GGT-CA
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        23173 18 +     39228 T-----G----------T--------TTT----------------------TT-T-----C---GAG---GGT-CA
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            52548 18 +     63517 T-----G----------T--------TTT----------------------TT-T-----C---GAG---GGT-CA
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        77798 18 +    116806 T-----G----------T--------TTT----------------------TT-T-----C---AAG---GGT-CA
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     30812 18 -     33031 T-----G----------T--------TTT----------------------TT-T-----C---GAG---GGT-CA
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3085123 21 -   3498232 TT----TGT-------GT--------TTG----------------------TT-T---------AAG---GGT-CA
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    12164 13 +     22452 TT----T----------T-----GGGTTT----------------------TT-T---------------------
i Lepus_americanus.LepAme_scaffold_62849                C 0 I 5
s Lipotes_vexillifer.KE558548.1                            135134 22 +   3060487 a----tt------tttta--------ttg----------------------tt-t---------gag---gGT-CC
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19247548 17 +  19376315 T-----T----------T--------CTT----------------------TT-T---------AAG---GGT-CA
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loxodonta_africana.GL010040.1                          20591268 13 -  62548349 ---------------------------tt----------------------tt-t---------aat---agt-ca
i Loxodonta_africana.GL010040.1                         I 5 C 0
s Lycaon_pictus.CM007556.1                               11087272 14 +  39895028 --------------------------tta----------------------tt-t---------aag---GTT-CA
i Lycaon_pictus.CM007556.1                              I 3 C 0
s Macaca_arctoides.k141_2201161                             19288 17 +     74745 T-----T----------T--------CTT----------------------TT-T---------AAG---GGT-CG
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12705744 17 +  12821369 T-----T----------T--------CTT----------------------TT-T---------AAG---GGT-CG
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                1389 17 -      3136 T-----T----------T--------CTT----------------------TT-T---------AAG---GGT-CG
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           46206 17 +     63263 T-----T----------T--------CTT----------------------TT-T---------AAG---GGT-CG
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                  909 17 -      2568 T-----T----------T--------CTT----------------------TT-T---------AAG---GGT-CG
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 1495 17 -      7381 T-----T----------T--------CTT----------------------TT-T---------AAG---GGT-CG
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  44713 17 -     79256 T-----T----------T--------CTT----------------------TT-T---------AAG---GGT-CG
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196034821 17 + 196197964 T-----T----------T--------CTT----------------------TT-T---------AAG---GGT-CG
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11444989 17 +  11645122 T-----T----------T--------CTT----------------------TT-T---------AAG---GGT-AG
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   3660 17 -     46448 T-----T----------T--------CTT----------------------TT-T---------AAG---GGT-CG
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                1332 17 -     13212 T-----T----------T--------CTT----------------------TT-T---------AAG---GGT-CG
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 15013 17 -     55006 T-----T----------T--------CTT----------------------TT-T---------AAG---GGT-CG
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43840130 17 +  43892939 T-----T----------T--------CTT----------------------TT-T---------AAG---GGT-CG
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               16299 17 -     24607 T-----T----------T--------CTT----------------------TT-T---------AAG---GGT-CG
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               3665 17 -     27140 T-----T----------T--------CTT----------------------TT-T---------AAG---GGT-CG
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                700746 25 +    802869 TT----TTTGTTT---GT--------TTG----------------------TT-T---------GAG---GGT-CA
i Macroglossus_sobrinus.MacSob_scaffold_879             I 2 C 0
s Mandrillus_leucophaeus.scaffold125                     43436707 17 -  43563597 T-----T----------T--------CTT----------------------TT-T---------AAG---GGT-CA
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4449533 17 -   4543643 T-----T----------T--------CTT----------------------TT-T---------GAG---GGT-CA
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36872902 17 +  64221397 TT----T----------G--------TCT-----------------------T-T---------AAA---GGG-CA
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       63555 23 -    234502 TT----CTTTT-----GT--------TTG----------------------TT-G---------AAG---GGT-CA
i Megaderma_lyra.MegLyr_scaffold_3562                   I 2 C 0
s Mellivora_capensis.MelCap_flattened_line_15433              133 24 -     87323 TT----TGT-------GT--------TTG----------------------TT-T---------AAGGAAGGT-CA
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               11920  8 +     15977 TT----A----------T--------TAT----------------------T------------------------
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1046121  8 -  26018355 TT----T----------G--------TAT----------------------T------------------------
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Microcebus_murinus.CM007691.1                          16509428 17 +  47401472 t-----g----------t--------ttt----------------------t--t--------aaag---ggT-CA
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               21852 14 -     32043 --------------------------TTG----------------------TT-T---------GAG---GGT-TA
i Micronycteris_hirsuta.MicHir_scaffold_37978           I 6 C 0
s Microtus_ochrogaster.CM001673.1                        22819263  8 -  98408828 TT----T----------G--------TCT----------------------T------------------------
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8208848 14 +  10048721 ---------------------------tg----------------------tt-t---------aag---ggTTTG
i Miniopterus_natalensis.LDJU01000022.1                 I 9 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            33500 14 +     45743 ---------------------------TG----------------------TT-T---------AAG---GTTTTA
i Miniopterus_schreibersii.MinSch_scaffold_24116        I 6 C 0
s Miopithecus_ogouensis.k141_2935907                         1260 17 +     29742 T-----T----------T--------CTT----------------------TT-C---------AAG---GGT-CA
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        10636 21 -    104932 TT----TGT-------GT--------TTG----------------------TT-T---------AAG---GGT-CA
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     4818 17 +      8497 T-----G----------T--------TTT----------------------T--T--------AAAG---GGT-CA
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 145569 22 +    154973 AT----TTTTT------A--------TTG----------------------TT-T---------GAG---GGT-CC
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                160363 14 +    265003 --------------------------TTG----------------------CT-T---------AAT---GGT-TA
i Mormoops_blainvillei.MorMeg_scaffold_2952             I 6 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 3737 21 -      4346 AT----TTTT-------A--------TTA----------------------TT-T---------GAG---GGT-CA
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  144058 21 -    168139 TT----TTT-------GT--------TTG----------------------TT-T---------AAG---GCT-TA
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          18721 13 -    100666 ---------------------------TG----------------------TT-T---------AAG---GGT-TA
i Murina_feae.MurFea_scaffold_2254                      I 6 C 0
s Mus_caroli.LT608236.1                                  70765777  8 +  92629107 t----tt----------g--------ttt----------------------t------------------------
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75488845  4 +  98207768 --------------------------ttt----------------------t------------------------
i Mus_musculus.chr16                                    I 3 C 0
s Mus_pahari.LT608305.1                                  67555062  8 +  89017189 t----tt----------g--------ttt----------------------t------------------------
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74330017  8 +  97876770 t----tt----------g--------ttt----------------------t------------------------
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             10827 18 +     98495 TT----T----------G--------TTT----------------------TA-T---------AAG---GGT-CA
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4423498 24 -  28371801 TT----TGT-------GT--------TTG----------------------TT-T---------AAGGAGGGT-CA
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     89224 18 -    117718 TT----T----------G--------TTT----------------------TC-T---------AGG---GAT-CA
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               967016 13 +   8389877 ---------------------------TG----------------------TT-T---------AAG---GGT-TA
i Myotis_brandtii.KE161952.1                            I 6 C 0
s Myotis_davidii.KB114863.1                               5018692 13 +   6462685 ---------------------------TG----------------------TT-T---------AAG---GGT-TA
i Myotis_davidii.KB114863.1                             I 6 C 0
s Myotis_lucifugus.GL429887.1                             3464596 13 -   3747815 ---------------------------TG----------------------TT-T---------AAG---GGT-TA
i Myotis_lucifugus.GL429887.1                           I 6 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         9811 13 +     66751 ---------------------------TG----------------------TT-T---------AAT---GGT-TC
i Myotis_myotis.MyoMyo_scaffold_6123                    I 6 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             4216 26 -      8794 TT----TT-------AAAAAAAA---TTT----------------------AT-A---------TTG---GGT-CA
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            117611 40 +    362372 t----tt----------g--------tgtgtgtgtgtgtgtatggtttaaATT-T---------AAT---GGT-AA
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               7762 17 +     48152 T-----T----------T--------CTT----------------------TT-T---------AAG---GGT-CA
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4484028 21 -  14209539 TT----TGT-------GT--------TTG----------------------TT-T---------AAG---GGT-CA
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3950183 23 -   4490290 a----tt-----ttttta--------ttg----------------------tt-t---------gag---gGT-CC
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  48466 13 +     94413 --------------------------TTC----------------------TT-T----------AG---GGT-TA
i Noctilio_leporinus.NocLep_scaffold_12062              I 6 C 0
s Nomascus_annamensis.k141_302224                            1219 17 +      1516 T-----T----------T--------CTT----------------------TT-T---------AAG---GGT-CA
i Nomascus_annamensis.k141_302224                       C 0 I 13
s Nomascus_concolor.k141_226614                               479 17 -      5092 T-----T----------T--------CTT----------------------TT-T---------AAG---GGT-CA
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_642452                            1262 17 +      2851 T-----T----------T--------CTT----------------------TT-T---------AAG---GGT-CA
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             24197 17 -  18771707 t-----t----------t--------gtt----------------------tt-t---------aag---ggt-ca
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  1900 17 +      4512 T-----T----------T--------CTT----------------------TT-T---------AAG---GGT-CA
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                30077 14 +   3668941 --------------------------tta----------------------tt-t---------aag---GTT-CA
i Nyctereutes_procyonoides.CAJHUB010000786.1            I 3 C 0
s Ochotona_princeps.JH802095.1                            4995251 14 -  23139505 TT----C----------G----GGGGATT----------------------TT-T---------------------
i Ochotona_princeps.JH802095.1                          C 0 I 4
s Octodon_degus.JH651621.1                                3684765 18 +  10294119 t----tt----------g--------ttt----------------------tc-t---------aag---gat-ca
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             678691 21 -   3126709 TT----TGT-------GT--------TTG----------------------TT-T---------AAG---GGT-CA
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1078868 21 +   1425656 AT----TTTT-------A--------CTG----------------------TT-T---------GAG---GGT-CA
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         36162 21 +     78940 AT----TTTT-------A--------CTG----------------------TT-T---------GAG---GGT-CA
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  124520  8 +    145789 TT----T----------G--------CCT----------------------T------------------------
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  36321  8 +     62360 TT----T----------G--------TCT----------------------T------------------------
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7223866 22 -   7562323 a----tt------tttta--------ttg----------------------tt-t---------gag---gGT-AC
i Orcinus_orca.KB316965.1                               C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141875184 13 + 163896628 TT----T----------T-----GGGTTT----------------------TT-T---------------------
i Oryctolagus_cuniculus.CM000803.1                      C 0 I 5
s Otocyon_megalotis.JAEUCK010005121.1                      307358 14 -    505867 --------------------------tta----------------------tt-t---------aag---GTT-CA
i Otocyon_megalotis.JAEUCK010005121.1                   I 3 C 0
s Ovis_aries.CM001582.2                                 134076428 21 - 275406953 AT----TTTT-------A--------TTG----------------------TT-T---------GAG---GGT-CA
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      77642 21 +    140051 AT----TTTT-------A--------CTG----------------------TT-T---------GAG---GGT-CA
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127573905 17 - 205426864 t-----t----------t--------ctt----------------------tt-t---------aag---ggt-CA
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120151058 17 - 196562556 t-----t----------t--------ctt----------------------tt-t---------aag---ggt-CA
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  33503 21 +    295523 TT----TTT-------GT--------TTG----------------------TT-T---------AAG---GGT-TA
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3637239 21 +  18214204 t----tt-------ttgt--------ttg----------------------tt-t---------aag---ggt-TA
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5026898 21 -   6340057 t----tt-------ttgt--------ttg----------------------tt-t---------aag---ggt-TA
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1065289 21 -   1292953 AT----TTTT-------A--------TCG----------------------TT-T---------GAG---GGT-CA
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188155498 17 - 188283584 t-----t----------t--------ctt----------------------tt-t---------aag---ggt-CA
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             3815 17 +      5367 T-----T----------T--------CTT----------------------TT-T---------AAG---GGT-CA
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47512886 17 +  47705337 T-----T----------T--------CTT----------------------TT-T---------AAG---GGT-TA
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 66864 17 -    104429 T-----T----------T--------CTT----------------------TT-T---------AAG---GGT-CA
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    5396 17 +     14967 T-----T----------T--------CTT----------------------TT-T---------AAG---GGT-TA
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 1257 17 -      7628 T-----T----------T--------CTT----------------------TT-T---------AAG---GGT-CA
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    114931 21 -    135482 TT----TTT-------GT--------ATG----------------------TT-T---------AAG---CAT-TA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      42811 17 -     45160 CT----T----------A--------TTG---------------------TTT-T---------CCA---TG---T
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4949553  8 -   8017169 TT----T----------G--------TCT----------------------T------------------------
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    11701 18 -     36578 TT----T----------G--------TTT----------------------TC-T---------AAA---GTT-TA
i Petromus_typicus.PetTyp_scaffold_33007                I 3 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            120483 22 -    122454 AT----TTTTT------A--------TTG----------------------TT-T---------GAG---GGT-CC
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1987485                           1284 17 -      5908 T-----T----------T--------CTT----------------------TT-T---------AAG---GGT-CA
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       1904 17 -     17985 T-----T----------T--------CTT----------------------TT-T---------AAG---GGT-CA
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            1271 17 +      7694 T-----T----------T--------CTT----------------------TT-T---------AAG---GGT-CA
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26739749 17 +  26888534 t-----t----------t--------ctt----------------------tt-t---------aag---ggt-CA
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            96665 13 +    112873 ---------------------------TG----------------------TT-T---------AAG---TGT-TA
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        I 10 C 0
s Pithecia_albicans.k141_991845                             42881 17 -     61926 T-----C----------T--------CTC----------------------AT-T---------AAG---AGT-CA
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        24312 17 +     78826 T-----C----------T--------CTC----------------------AT-T---------AAG---AGT-CA
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              8261 17 -     15800 T-----C----------T--------CTC----------------------AT-T---------AAG---AGT-CA
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        11459 17 -     16101 T-----C----------T--------CTC----------------------AT-T---------AAG---AGT-CA
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          4768 17 +      9673 T-----C----------T--------CTC----------------------AT-T---------AAG---AGT-CA
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13473764 17 -  19735023 T-----C----------T--------CTC----------------------AT-T---------AAG---AGT-CA
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           12670 17 -     31692 T-----C----------T--------CTC----------------------AT-T---------AAG---AGT-CA
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           4553 22 +     21690 AT----TTTTT------A--------TTG----------------------TT-T---------GAG---GGT-CC
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       22103 17 +     44506 T-----C----------T--------CTC----------------------AT-T---------AAG---AGT-CA
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        22315 17 +     67491 T-----C----------T--------CTC----------------------AT-T---------AAG---AGT-CA
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      12554 17 -     98129 T-----C----------T--------CTC----------------------AT-T---------AAG---AGT-CA
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     22154 17 +    147771 T-----C----------T--------CTC----------------------AT-T---------AAG---AGT-CA
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        22409 17 -     23762 T-----C----------T--------CTC----------------------AT-T---------AAG---AGT-CA
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          2875 17 -     55515 T-----C----------T--------CTC----------------------AT-T---------AAG---AGT-CA
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         22228 17 +    152463 T-----C----------T--------CTC----------------------AT-T---------AAG---AGT-CA
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_miltoni.k141_841561                         11950 17 +    134592 T-----C----------T--------CTC----------------------AT-T---------AAG---AGT-CA
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          22538 17 -     75465 T-----C----------T--------CTC----------------------AT-T---------AAG---AGT-CA
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              186430 17 -    373494 t-----t----------t--------ctt----------------------tt-t---------aag---ggt-CA
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19807078 17 +  19899266 T-----T----------T--------CTT----------------------TT-T---------AAG---GGT-CA
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               5006 17 -     15069 T-----T----------T--------CTT----------------------TT-T---------AAG---GGT-CA
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              5140 17 +     14865 T-----T----------T--------CTT----------------------TT-T---------AAG---GGT-CA
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                76561 13 +     78963 ---------------------------TT----------------------TT-A---------TAT---AGC-TA
i Procavia_capensis.ProCapCap_scaffold_15315            I 8 C 0
s Prolemur_simus.MPIZ01000048.1                           6847798 18 +  12164890 t-----g----------t--------ttt----------------------tt-t--------aaag---ggt-CA
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    667023 18 -   2312742 t-----g----------t--------ttt----------------------tt-t--------aaag---ggt-CA
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         2850 18 +     11805 T-----G----------T--------TTT----------------------TT-T--------AAAG---GGT-CA
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           42186 18 +     52369 T-----G----------T--------TTT----------------------TT-T--------AAAG---GGT-AA
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         34574 18 -     44753 T-----G----------T--------TTT----------------------TT-T--------AAAG---GGT-AA
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            16496 18 +     27322 T-----G----------T--------TTT----------------------TT-T--------AAAG---GGT-AA
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       16132 18 -     53241 T-----G----------T--------TTT----------------------TT-T--------AAAG---GGT-CA
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         38404 18 -     48185 T-----G----------T--------TTT----------------------TT-T--------AAAG---GGT-CA
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           33464 18 +     77221 t----ta----------t--------tat-tat-tat-t--at--t-----t------------------------
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            3028  4 -     27784 --------------------------TTG----------------------T------------------------
i Pteronotus_parnellii.KE867983.1                       I 3 I 3
s Pteronura_brasiliensis.PteBra_flattened_line_1343        245807 24 -    344369 TT----TGT-------GT--------TTG----------------------TT-T---------AAGGAGGGT-CA
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13245135 22 -  17261082 t----tt------ttttt--------ttg----------------------tt-t---------gac---gGT-CA
i Pteropus_alecto.KB031157.1                            I 2 C 0
s Pteropus_vampyrus.KN525959.1                             603086 22 -   3946241 t----tt------ttttt--------ttg----------------------tt-t---------gac---gGT-CA
i Pteropus_vampyrus.KN525959.1                          I 3 C 0
s Puma_concolor.QAVW01000427.1                          131533483 21 - 161321710 t----tt-------ttgt--------ttg----------------------tt-t---------aag---ggt-TA
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             29124 17 +     56732 T-----T----------T--------CTT----------------------TT-T---------AAG---GGT-CA
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6805615 17 +   6970761 T-----T----------T--------ATT----------------------TT-T---------AAG---GGT-CA
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             5009 17 +     18040 T-----T----------T--------ATT----------------------TT-T---------AAG---GGT-CA
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                14945 21 +     68503 AT----TTTT-------A--------CTG----------------------TT-T---------GAG---GGT-CA
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13914731  8 +  90463843 t----tt----------g--------ttt----------------------t------------------------
i Rattus_norvegicus.chr11                               I 9 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1786957 25 +   2252614 t----tt---tcctttgt--------tta----------------------tt-t---------aag---GGT-CA
i Rhinolophus_sinicus.LVEH01000179.1                    I 2 C 0
s Rhinopithecus_bieti.k119_1391695                           1237 17 -      1866 T-----T----------T--------CTT----------------------TT-T---------AAG---GGT-CA
i Rhinopithecus_bieti.k119_1391695                      C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206376894 17 - 206558726 t-----t----------t--------ctt----------------------tt-t---------aag---ggt-CA
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44855794 17 -  45163003 T-----T----------T--------CTT----------------------TT-T---------AAG---GGT-CA
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                18420 15 +    109198 -----------------T--------TTG----------------------TT-T---------GAG---GGT-CA
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            I 3 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       7108 21 +     12214 AT----TTTT-------A--------TTG----------------------TT-T---------GAG---GTT-CA
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15671969 17 -  43202129 T-----C----------T--------CTC----------------------AT-T---------GAG---AGT-CA
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        3886 17 +     34089 T-----C----------T--------CTC----------------------AT-T---------GAG---AGT-CA
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              3827 17 -     60842 T-----C----------T--------CTC----------------------AT-T---------GAG---AGT-CA
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              3922 17 +     67014 T-----C----------T--------CTC----------------------AT-T---------GAG---AGT-CA
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              3900 17 +     60816 T-----C----------T--------CTC----------------------AT-T---------GAG---AGT-CA
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 3837 17 -     76454 T-----C----------T--------CTC----------------------AT-T---------GAG---AGT-CA
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17340562 17 -  30362882 T-----C----------T--------CTC----------------------AT-T---------AAG---AGT-TA
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         19921 17 -     62485 T-----C----------T--------CTC----------------------AT-T---------AAG---AGT-TA
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   31451 21 -    114521 TT----CTTT-------G--------CTG----------------------TT-C---------AAA---AGT-CA
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        2621 17 +     15331 T-----T----------T--------CTT----------------------TT-T---------AAG---GGT-CA
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       8018 17 +     20762 T-----T----------T--------CTT----------------------TT-T---------AAG---GGT-CA
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         118020 17 +    130994 T-----T----------T--------CTT----------------------TT-T---------AAG---GGT-CA
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           36807 17 +     46263 T-----T----------T--------CTT----------------------TT-T---------AAG---GGT-CA
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     29921 17 +     42640 T-----T----------T--------CTT----------------------TT-T---------AAG---GGT-CA
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        12965 17 +     30600 T-----T----------T--------CTT----------------------TT-T---------AAG---GGT-CA
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   99518  8 -    120886 TT----T----------G--------TCT----------------------T------------------------
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            18018 25 +    739146 TTTCTTTTT-------AA--------AAG----------------------AT-T---------AAG---ACT-CA
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2238983 18 +   2842873 TT----T----------G--------TCT----------------------TT-T---------AAA---GGG-CA
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             233931 21 -    276980 TT----TGT-------GT--------TTA----------------------CT-T---------AAG---GGT-CA
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            26722 21 +     62062 TT----TTT-------GT--------TTG----------------------TT-T---------AAG---GCT-TA
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189271018  9 + 218635234 ----------------------------G----------------------TT-T---------GA------G-TA
i Sus_scrofa.CM000824.4                                 I 5 C 0
s Symphalangus_syndactylus.tarseq_24                        14179 17 -  13920577 T-----T----------T--------CTT----------------------TT-T---------AAG---GGT-CA
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               5180 25 -      6213 TT----TTTT-----C-G-----TTGTTG----------------------TT-T---------AAG---GGT-TA
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               13893 25 +     45698 TT----TT-------AAAAAAAA---ATT-----------------------T-A---------TTG---GGT-CA
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      806045 21 +   1148477 A----GCTTT-------T--------TTC----------------------TT-T---------AAG---GGT-CA
i Tapirus_indicus.TapInd_scaffold_176                   I 162 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  56736 21 +     99546 A----GCTTT-------T--------TTC----------------------TT-T---------AAG---GGT-CA
i Tapirus_terrestris.TapTer_scaffold_14939              I 196 C 0
s Tarsius_lariang.k141_609102                               25697 17 +     42269 G-----A----------T--------TTT----------------------TT-T---------CAG---AGT-CA
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               59013 17 +     65473 G-----A----------T--------TTT----------------------TT-T---------CAG---AGT-CA
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194007025 17 - 194193292 t-----t----------t--------ctt----------------------tt-t---------aag---ggt-CA
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             38516 18 -     47444 TT----T----------G--------TTT----------------------TC-T---------AAG---AAT-CA
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  4737 31 +      6782 TT----TTTT-------GAAAAAAAATTT---------------------TTTTA---------AAA---GAT-CA
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  135037 14 -    259118 --------------------------TTG----------------------TT-T---------GAG---GGT-TA
i Tonatia_saurophila.TonSau_scaffold_3334               I 6 C 0
s Trachypithecus_auratus.k141_738098                        26128 17 +     38948 T-----T----------T--------CTT----------------------TT-T---------AAG---GGT-CA
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   19855 17 -     32910 T-----T----------T--------CTT----------------------TT-T---------AAG---GGT-CA
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      1242 17 -     12939 T-----T----------T--------CTT----------------------TT-T---------AAG---GGT-CA
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       1177 17 -     14244 T-----T----------T--------CTT----------------------TT-T---------AAG---GGT-CA
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           42575 17 -     54611 T-----T----------T--------CTT----------------------TT-T---------AAG---GGT-CA
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                         381 17 -     11566 T-----T----------T--------CTT----------------------TT-T---------AAG---GGT-CA
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     2553 17 -     15592 T-----T----------T--------CTT----------------------TT-T---------AAG---GGT-CA
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          1210 17 +     14371 T-----T----------T--------CTT----------------------TT-T---------AAG---GGT-CA
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  50962 17 +     51589 T-----T----------T--------CTT----------------------TT-T---------AAG---GGT-CA
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       14143 17 +     14732 T-----T----------T--------CTT----------------------TT-T---------AAG---GGT-CA
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       4615 17 -     28054 T-----T----------T--------CTT----------------------TT-T---------AAG---GGT-CA
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44659415 17 -  44834318 T-----T----------T--------CTT----------------------TT-T---------AAG---GGT-CA
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       1718 17 +     13828 T-----T----------T--------CTT----------------------TT-T---------AAG---GGT-CA
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   4322 22 +     90398 AT----TTT-----GC-A--------TTG----------------------TT-T---------GAG---GGT-CA
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16081720 13 +  31416278 ---------------------------ct----------------------gt-a---------aat---agt-ca
i Trichechus_manatus.JH594618.1                         I 5 C 0
s Tupaia_chinensis.KB320831.1                             2792101 13 -   3938065 ------A----------G--------T-------------------------T-T---------AAG---GTT-CA
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    4301 16 +     13056 ------G----------G--------TTT----------------------TT-T---------AAG---GTT-CA
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69312583 22 -  96451834 a----tt------tttta--------ttg----------------------tt-t---------gag---gGT-AC
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                    458 21 +     10241 TT----CTT-------AG--------CTG----------------------TT-T---------AAA---AAT-CA
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6513939 21 +  28682327 TT----TGT-------GT--------TTG----------------------TC-T---------AAG---GGt-ca
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  4508 18 -     20643 T-----G----------T--------TTT----------------------TT-T--------AAAG---GGT-CA
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             24049 18 -     33872 T-----G----------T--------TTT----------------------TT-T--------AAAG---GGT-CA
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1523822 26 -   2331223 a----tt--ttttctttt--------ttg----------------------tt-t---------gac---gGT-CA
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                137455 14 -    281493 --------------------------TTA----------------------TT-T---------AAG---GTT-CG
i Vulpes_lagopus.VulLag_flattened_line_2045             I 3 C 0
s Xerus_inauris.XerIna_scaffold_7898                       126085 18 -    134049 TT----G----------G--------TGT----------------------TT-T---------AAA---GGT-CA
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        213417 21 -    227762 TT----TGT-------GT--------TTG----------------------TT-T---------AAG---GGT-CA
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           6078 22 -      8775 AT----TTTTT------A--------TTG----------------------TT-T---------GAG---GGT-CC
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Sorex_araneus.JH798170.1                               17750754 3364 -  27805282 I
e Dinomys_branickii.DinBra_scaffold_1996                   156356 54 +    228994 I
e Erinaceus_europaeus.JH835290.1                         11531598 1064 +  16010500 I
e Orycteropus_afer.OryAfe_flattened_line_13509              43378 16 -     66828 I
e Microgale_talazaci.MicTal_scaffold_34660                  30638 409 -     48017 I
e Manis_pentadactyla.KN017078.1                             35015 87 +     58827 I
e Manis_javanica.JSZB01003966.1                            144940 87 +    252755 I
e Elephantulus_edwardii.JH947210.1                        7804622 10712 +  15467074 I
e Echinops_telfairi.JH980316.1                           22994192 422 -  44670279 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     14107 296 -     20485 I
e Perodicticus_potto.k141_713187                            23970 79 -     27972 I
e Perodicticus_ibeanus.k141_117958                           4661 79 -     23713 I
e Otolemur_garnettii.GL873528.1                          18007674 78 -  38779656 I
e Otolemur_crassicaudatus.k141_321880                       38246 79 +     38679 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65668684 79 +  89412551 I
e Nycticebus_coucang.k141_2051882                            3075 79 +      6470 I
e Nycticebus_bengalensis.LG16                            65566346 79 -  95554990 I
e Loris_tardigradus.ctg97                                 3777661 79 +   6799190 I
e Loris_lydekkerianus.k141_550999                            9912 79 +     84689 I
e Galagoides_demidoff.k141_1769638                           9597 79 +     27357 I
e Galago_senegalensis.k141_964197                           12529 70 -     43889 I
e Galago_moholi.ctg555                                     210150 70 -    847004 I
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I
e Arctocebus_calabarensis.k141_587554                         266 79 +      9265 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               11182 13 +    209709 TAGAT-TTCAATAT
s Acinonyx_jubatus.LLWD01000356.1                         2033166 13 +   3721120 TTGAG-ATTAATAT
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    111836 13 -    189883 TAGAT-TTTAATGT
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10656470 13 +  23371972 TTGAG-attaatat
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7093609 13 -  16596857 TTGAG-ATTAATGT
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   12209 13 -     22067 CAGAG-TTCAAAAT
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                    533 13 -     60446 TAGGT-TTCAATAT
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         1254 13 -     29318 TAGCT-TTCAATAT
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                          191 13 +     38766 TAGCT-TTCAATAT
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          1148 13 -     80423 TAGCT-TTCAATAT
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             9447 13 -     18050 CAGAT-TTCAATAT
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                 10537 13 -     11521 CAGAT-TTCAATAT
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                             10124 13 -     21359 CAGAT-TTCAATAT
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_298055                                 1418 13 +      1823 CAGAT-TTCAATAT
i Alouatta_juara.k141_298055                            C 0 C 0
s Alouatta_macconnelli.k141_1331706                          9420 13 -     10438 CAGAT-TTCAATAT
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            6076 13 +      7047 CAGAT-TTCAATAT
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             9356 13 +     10410 CAGAT-TTCAATAT
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            3164 13 -      4927 CAGAT-TTCAATAT
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             6093 13 +      6429 CAGAT-TTCAATAT
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3519307 13 +   4113121 CAGAC-TCCAATGT
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      389481 13 -    631301 TAGAT-TCCAACAT
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            29889 13 +     33004 CAGAC-ATCAATGT
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 61806 13 +     78111 CAGAT-TTCAATAT
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            4747 13 +     22701 CAGAT-TTCAATAT
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5748704 13 +   9889416 CAGAT-TTCAATAT
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             5291 13 -    104377 CAAAT-TTCAATAT
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               5293 13 +     23246 CAGAT-TTCAATAT
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     2936 12 +      5067 TAGAT-TTCAA-AC
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 7884 13 -     29036 TAGAT-TCCAACAT
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9538552 13 +  39197703 CAGAT-TTCAATAT
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             59823 13 +     85812 CAGAT-TTCAATAT
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                10835 13 +     89302 CAGAT-TTCAATAT
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             15340 13 -     58268 CAGAT-TTCAATAT
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             63331 13 +    119057 CAGAT-TTCAATAT
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               5300 13 -     25888 CAGAT-TTCAATAT
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 5939 13 -     16375 TATAT-TTCAACAT
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              2259 13 +      2719 TATAT-TTCAACAT
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26379325 12 +  51448160 CAGAC--TCAATAT
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        4556 12 -     13118 CAGAC--TCAATAT
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   42370 13 -     72089 CAGAC-TCCAATGT
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6559044 13 +   6870073 CAGAC-TTCAATGT
i Bison_bison.KN264915.1                                I 112 C 0
s Bos_indicus.CM003021.1                                138139148 13 - 161108492 CAGAC-TTCAATGT
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     571610 13 -    998990 CAGAC-TTCAATGT
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136294881 13 - 158972876 CAGAC-TTCAATGT
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1230648 13 -   1914593 CAGAC-TTCAGTGT
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               113193 13 -    171031 CAGAT-TTCAATAT
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 12221 13 +    125063 CAGAT-TTCAATAT
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                14266 13 -    216513 CAGAT-TTCAATAT
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        6806 13 -    134917 CAGAT-TTCAATAT
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3218741 13 -   8989139 CAGAC-TTCGTTAT
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           396445 13 -  15254737 CAGAC-TTCGTTAT
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2972178 13 +   6889770 CAGAC-TTCGTTAT
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11518629 13 +  39901454 TTGAG-ATTTGTAT
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   13654 13 +     87036 TTGAG-ATTTGTAT
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11265296 13 -  35597290 TTGAG-ATTTGTAT
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11087830 13 +  39895921 TTGAG-ATTTGTAT
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16454845 13 -  44759192 TTGAG-ATTTGTAT
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21324383 13 + 157394656 CAGAC-TCCAATGT
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135705610 13 - 157403528 CAGAC-TCCAATGT
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_979108                  1183 13 -      1248 TAGAT-TTCAATAC
i Capromys_pilorides.CapPil_scaffold_979108             C 0 C 0
s Carlito_syrichta.NW_007248099.1                          308229 13 +    345090 TAAAT-TGCAACAT
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               58682 13 +     67245 TAGAT-TCCAACAT
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   29926 13 +     33760 TACAT-TTGAACAT
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   157938 13 -    276539 TAGAT-TTCAATTT
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15785811 13 -  24422027 TAAAT-TTCAATAC
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15797745 13 -  24440124 TAAAT-TTCAATAC
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       175936 13 +    436027 TAAAT-TTCAATAC
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18890036 13 -  29618158 CAGAT-TTCACTAT
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 7580 13 -     26817 CAGAT-TTCACTAT
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                11820 13 +     25043 CAGAT-TTCACTAT
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         7262 13 +     21754 TAAAT-TGCAACAT
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4363046 13 +   7569818 TAGAT-ATCAATAT
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         2798 13 -      9338 TAGAT-ATCAATAT
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6554476 13 +   6739814 TAGGT-TTCAATAT
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      25953 13 +     60454 TAGGT-TTCAATAT
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          1158 13 -     21101 TAGGT-TTCAATAT
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         58468 13 -    107033 TAGGT-TTCAATAT
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        1360 13 -     17608 TAGGT-TTCAATAT
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          28855 13 +     30494 TAGGT-TTCAATAT
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          57701 13 -     59240 TAGGT-TTCAATAT
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          1402 13 +     16677 TAGGT-TTCAATAT
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           23560 13 +     35983 TAGGT-TTCAATAT
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11990088 13 +  12117833 TAGGT-TTCAATAT
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46476846 13 +  46592721 TAGGT-TTCAATAT
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      40397 13 -     45581 TAGGT-TTCAATAT
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       1403 13 +     35577 TAGGT-TTCAATAT
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        1179 13 -     25661 TAGGT-TTCAATAT
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        1157 13 -     17744 TAGGT-TTCAATAT
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        20773 13 +     37128 TAGGT-TTCAATAT
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           2005 13 -      6963 TAACT-TTCAATAT
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           58236 13 -     68416 TATAT-TTCAATAT
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            7279 13 +     13308 TATAT-TTCAATAT
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             4836 13 -     18223 CAGAT-TTCAATAT
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             21859 13 +     25473 CAGAT-TTCAATAT
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           40894 13 +     57117 CAGAT-TTCAATAT
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          45573 13 +     54541 CAGAT-TTCAATAT
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15960958 13 +  43084221 TACATTT-CAGTAC
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         70395 13 +    196370 CAGAT-TTCAATAT
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          14575 13 +     40510 CAGAT-TTCAATAT
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15138319 13 -  15256731 TAGCT-TTCAACAT
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      33366 13 -     53260 TAGCT-TTCAACAT
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101143930 13 + 101219884 TAGCT-TTCAACAT
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                15685 13 -     21363 TAGCT-TTCAATAT
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           760992 13 +    964067 TAGCT-TTCAATAT
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10885696 13 +  10971483 TAGGT-TTCAATAT
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147663860 13 + 156195979 TAGGT-TTCAATAT
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            15845 13 +     23629 TAGGT-TTCAATAT
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60612667 13 +  78930452 CAGAT-TTCAAGAT
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         38774 13 -     40477 tagat-tccaatat
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 I 85
s Cricetomys_gambianus.CriGam_scaffold_949                 277744 13 -    399297 TAGAT-TTCAATGT
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53028419 13 +  72327488 TAGAT-TTTGATAT
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            51177 13 -     70449 TTGAG-ATTAATGT
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  207371 13 -    956709 TAGTT-TTCTGTGT
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 29959 13 -     67205 TAGAT-TTCAATAC
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                16967 13 +     26546 TAAAT-TTCAATAG
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             58058 13 -    236241 TAAAT-TTCAATAC
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          182842 13 -   6883506 TACCT-TTTAATAT
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16844095 13 +  31942871 TAGAT-TTCAATAT
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80036003 12 -  96802777 CAGAC--TCAATAT
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18697991 13 -  18957592 TAGAT-TCCAACAT
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 321695 13 +    993696 caGAT-ATCAATAT
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   2345 13 +    151128 TAGAT-ATCAATAT
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dipodomys_ordii.KN672545.1                              3655353 13 +   4240102 taaat-tccAATAT
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 26986 13 +     28912 TAAAT-TCCAATAT
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                35307 13 -     73477 TAAAT-TTCAATAC
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Eidolon_helvum.KE772537.1                                 11355  6 +     24177 TAGAT-T-------
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1490658 13 +   1727528 CAGAC-TTCAATGG
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        238978 13 -    369425 TAGAT-TTCAATAT
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           6091 13 -      7838 TAGCT-TTCAATAT
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85871343 13 +  99434291 CGAAG-ATTAACAT
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4703373 12 +   6522550 TAGAT-T-CAATAT
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5852096 13 -   7175178 AAGAT-ATCAACAT
i Equus_asinus.JREZ01000062.1                           C 0 I 2
s Equus_caballus.CM000402.2                              13350599 13 +  41866177 AAGAT-ATCAACAT
i Equus_caballus.CM000402.2                             C 0 I 2
s Equus_przewalskii.ATBW01073585.1                          12089 13 +     92910 AAGAT-ATCAACAT
i Equus_przewalskii.ATBW01073585.1                      C 0 I 2
s Erythrocebus_patas.Contig8                             48770497 13 -  48907691 TAGCT-TTCAATAT
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          314209 12 +    330699 CAGAC--TCAATAT
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             60663 12 +     89355 CAGAC--TCAATAT
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              4281 13 +     13586 TATAT-TTCAACGT
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               4218 13 -      6809 TATAT-TTCAACGT
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            10691 13 +     36558 TATAT-TTCAACGT
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             7010 13 +     60246 TATAT-TTCAACCT
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                10489 13 +    109717 TACAT-TTCAACGT
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               14872 13 +     16540 TATAT-TTCAACCT
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                15145 13 +     27497 TATAT-TTCAACCT
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           17602 13 +     26808 TATAT-TTCAACAT
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                32337 13 +     46535 TATAT-TTCAACGT
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              15059 13 -     29447 TATAT-TTCAACGT
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129892142 13 - 159252932 TTGAG-ATTAATAT
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129279211 13 - 158578461 TTGAG-ATTAACAT
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 20356 13 +     52776 TTGAG-ATTAATAT
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               155498 13 +    324696 TAGAT-TTCAATAT
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    180457 13 -    189561 CAGAC-TTCAATGT
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           12330 13 -     18683 TAGAT-TTCAATAT
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               4562 13 -     14630 TAGAT-TTCAATAT
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119651661 13 - 195582420 TAGAT-TTCAATAT
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   76820 13 +    118900 TAGAT-GTCAATAG
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         1075 13 +     10286 TATAT-TTCAACAT
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_1254239                            9251 13 +      9690 TATAT-TTCAACAT
i Hapalemur_gilberti.k141_1254239                       C 0 C 0
s Hapalemur_griseus.k141_1387522                             4881 13 +     56096 TATAT-TTCAACAT
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        28131 13 -     42470 TATAT-TTCAACAT
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        44754 13 -     54384 TATAT-TTCAACAT
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              16383 13 +     53719 TTGAG-ATTAATAT
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                26655 13 -     91191 CAGAC-TCCAATGT
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2550291 13 +  31725842 TAGGT-TCCAATAT
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               56710 13 +     73687 TAGAT-TTCAGTGT
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              146284 13 +    277961 CAGAC-TTCAACAT
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      277577 13 -    477199 TAGAT-CCCAATAT
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              6729 13 -      9143 TAGAT-TCCAATAT
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      3968 13 -   7690867 TAGAT-TTCAATAT
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 16468 13 -     67322 TTGAG-ATTAATAT
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           18186 13 -    119109 TAAAT-TTCAATAC
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              4394 13 +      5897 TAGAT-TTCAATAT
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_624065                               1258 13 +      2112 TAGAT-TTCAATAT
i Hylobates_agilis.k141_624065                          C 0 C 0
s Hylobates_klossii.k141_466549                             10834 13 +     11537 TAGAT-TTCAATAT
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14623939 13 -  25970782 TAGAT-TTCAATAT
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            1195 13 -      2977 TAGAT-TTCAATAT
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     5361 12 +     22540 GAGAA--CCAGTAT
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7125081 13 +  13083262 TAAAT-TTCAACAC
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_4418183                                    701 13 -      1457 TATAT-TTCAACAT
i Indri_indri.k141_4418183                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               8203 12 +     17520 CAGAC--TCAATAT
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8564958 13 +  11848649 TAgag-ttcaaaat
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               22823 12 +     37189 CAGAC--TCAATAT
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          49416 13 -    147782 CAGAT-TTCAATAT
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   113471 12 -    115756 TAGAT-T-CAATAT
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258406435 13 - 285822530 TATAT-TTCAACAT
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        23191 13 +     39228 TATAT-TTCAACAT
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            52566 13 +     63517 TATAT-TTCAACAT
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        77816 13 +    116806 TATAT-TTCAACAT
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     30830 13 -     33031 TATAT-TTCAACAT
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3085144 13 -   3498232 TTGAg-attaataa
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    12182 13 +     22452 TAGGT-TTCAACAT
i Lepus_americanus.LepAme_scaffold_62849                I 5 C 0
s Lipotes_vexillifer.KE558548.1                            135156 12 +   3060487 CAGAC--TCAATAT
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19247565 13 +  19376315 TAGGT-TTCAATAT
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loxodonta_africana.GL010040.1                          20591281 13 -  62548349 tagct-ttcaatat
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11087286 13 +  39895028 TTGAG-ATTTGTAT
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             19305 13 +     74745 TAGGT-TTCAACAT
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12705761 13 +  12821369 TAGGT-TTCAACAT
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                1406 13 -      3136 TAGGT-TTCAACAT
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           46223 13 +     63263 TAGGT-TTCAACAT
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                  926 13 -      2568 TAGGT-TTCAACAT
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 1512 13 -      7381 TAGGT-TTCAACAT
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  44730 13 -     79256 TAGGT-TTCAACAT
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196034838 13 + 196197964 TAGGT-TTCAACAT
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11445006 13 +  11645122 TAGGT-TTCAACAT
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   3677 13 -     46448 TAGGT-TTCAACAT
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                1349 13 -     13212 TAGGT-TTCAACAT
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 15030 13 -     55006 TAGGT-TTCAACAT
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43840147 13 +  43892939 TAGGT-TTCAACAT
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               16316 13 -     24607 TAGGT-TTCAACAT
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               3682 13 -     27140 TAGGT-TTCAACAT
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                700771 13 +    802869 TAGAT-TCCAATAC
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43436724 13 -  43563597 TAGGT-TTCAATAT
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4449550 13 -   4543643 TAGGT-TTCAATAT
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36872919 13 +  64221397 TAAAT-TTCAACAC
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       63578 13 -    234502 GAGAT-CCCAATAC
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 I 2
s Mellivora_capensis.MelCap_flattened_line_15433              157 13 -     87323 CTGAG-ATTAATAT
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               11928 13 +     15977 TAGAT-TTCAATTT
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1046129 12 -  26018355 T-GAT-TTCAATAT
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Microcebus_murinus.CM007691.1                          16509445 13 +  47401472 TGTAT-TTCAACAT
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               21866 13 -     32043 TAGAT-GTCAATAT
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22819271 13 -  98408828 TAGAT-TTCAATAT
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8208862 13 +  10048721 TAGAT-TCCAATAC
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            33514 13 +     45743 TAGAT-TCCAATAC
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         1277 13 +     29742 TAGGT-TTCAATAT
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        10657 13 -    104932 TTGAG-ATTAATAA
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     4835 13 +      8497 TATAT-TTCAACAT
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 145591 12 +    154973 CAGAC--TCAATAT
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                160377 13 +    265003 CAGAT-TCCAATAT
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 3758 13 -      4346 CAGAC-TTCAGTGT
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  144079 13 -    168139 TTGAG-ATTAATAT
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          18734 12 -    100666 TAGAT-T-CAATAT
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70765785 13 +  92629107 tagat-ttcaatat
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75488849 13 +  98207768 aagat-ttcaatat
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67555070 13 +  89017189 tagat-ttcaatat
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74330025 13 +  97876770 tagat-ttcaatat
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             10845 13 +     98495 TGGAT-TTCAATTT
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4423522 13 -  28371801 ATGAG-ATTAACAT
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     89242 13 -    117718 TAGAT-TTCAATAC
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               967029 12 +   8389877 TAGAT-T-CAATAT
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5018705 12 +   6462685 TAGAT-T-TAATAT
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3464609 12 -   3747815 TAGAT-T-CAATAT
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         9824 12 +     66751 TAGAT-T-TAATAT
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             4242 13 -      8794 TAGCT-TTTAATAT
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            117651 11 +    362372 TAATT-TTGAAT--
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               7779 13 +     48152 TAGGT-TTCAATAT
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4484049 13 -  14209539 TTGAg-attaataa
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3950206 12 -   4490290 CAGAC--TCAATAT
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  48479 13 +     94413 TAGAT-TCCAATAT
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1439838                           2136 13 +      3718 TAGAT-TTCAATAT
i Nomascus_annamensis.k141_1439838                      I 111 I 246
s Nomascus_concolor.k141_226614                               496 13 -      5092 TAGAT-TTCAATAT
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_642452                            1279 13 +      2851 TAGAT-TTCAATAT
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             24214 13 -  18771707 tagat-ttcaaTAT
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  1917 13 +      4512 TAGAT-TTCAATAT
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                30091 13 +   3668941 TTGAG-ATTTGTAT
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Ochotona_princeps.JH802095.1                            4995269 12 -  23139505 -AGAT-TTAAACAT
i Ochotona_princeps.JH802095.1                          I 4 C 0
s Octodon_degus.JH651621.1                                3684783 13 +  10294119 tagat-ttcaatac
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             678712 13 -   3126709 TTGAG-ATTAATAT
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1078889 13 +   1425656 CAGAC-TTCAGTGG
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         36183 13 +     78940 CAGAC-TTCAATGT
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  124528 13 +    145789 TAGAT-TTCAATAT
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  36329 13 +     62360 TAGCT-TTCAGTAT
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7223888 12 -   7562323 CAGAC--TCAATAT
i Orcinus_orca.KB316965.1                               C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141875202 13 + 163896628 TAGGT-TTCAACAT
i Oryctolagus_cuniculus.CM000803.1                      I 5 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      307372 13 -    505867 TCGAG-ATTTGTAT
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Ovis_aries.CM001582.2                                 134076449 13 - 275406953 CAGAC-TCCAATGT
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      77663 13 +    140051 CAGAC-TCCAATGT
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127573922 13 - 205426864 TAGAT-Ttcaatat
i Pan_paniscus.CM003386.1                               C 0 I 24
s Pan_troglodytes.CM009241.2                            120151075 13 - 196562556 TAGAT-Ttcaatat
i Pan_troglodytes.CM009241.2                            C 0 I 24
s Panthera_onca.PanOnc_flattened_line_1615                  33524 13 +    295523 TTGAG-ATTAATAT
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3637260 13 +  18214204 TTGAG-ATTAATAT
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5026919 13 -   6340057 TTGAG-ATTAATAT
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1065310 13 -   1292953 CAGAC-TCCAATGT
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188155515 13 - 188283584 TAGGT-TTCAATAT
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             3832 13 +      5367 TAGGT-TTCAATAT
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47512903 13 +  47705337 TAGGT-TTCAATAT
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 66881 13 -    104429 TAGGT-TTCAATAT
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    5413 13 +     14967 TAGGT-TTCAATAT
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 1274 13 -      7628 TAGGT-TTCAATAT
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    114952 13 -    135482 TTGAG-ATTAATAT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      42828 13 -     45160 TAAAT-TTTAATGT
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4949561 13 -   8017169 TAGAT-TTCAGTGT
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    11719 13 -     36578 TAGAT-TCCAGTAT
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            120505 12 -    122454 CAGAC--TCAATAT
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1987485                           1301 13 -      5908 TAGGT-TTCAATAT
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       1921 13 -     17985 TAGGT-TTCAATAT
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            1288 13 +      7694 TAGGT-TTCAATAT
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26739766 13 +  26888534 TAGGT-TTCAATAT
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            96678 12 +    112873 TAGAT-T-CAATAT
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             42898 13 -     61926 CAGAT-TTCAATAT
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        24329 13 +     78826 CAGAT-TTCAATAT
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              8278 13 -     15800 CAGAT-TTCAATAT
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        11476 13 -     16101 CAGAT-TTCAATAT
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          4785 13 +      9673 CAGAT-TTCAATAT
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13473781 13 -  19735023 CAGAT-TTCAATAT
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           12687 13 -     31692 CAGAT-TTCAATAT
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           4575 12 +     21690 CAGAC--TCAATAT
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       22120 13 +     44506 CAGAT-TTCAATAT
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        22332 13 +     67491 CAGAT-TTCAATAT
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      12571 13 -     98129 CAGAT-TTCAATAT
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     22171 13 +    147771 CAGAT-TTCAATAT
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        22426 13 -     23762 CAGAT-TTCAATAT
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          2892 13 -     55515 CAGAT-TTCAATAT
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         22245 13 +    152463 CAGAT-TTCAATAT
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_miltoni.k141_841561                         11967 13 +    134592 CAGAT-TTCAATAT
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          22555 13 -     75465 CAGAT-TTCAATAT
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              186447 13 -    373494 TAGAT-GTCAATAT
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19807095 13 +  19899266 TAGAT-GTCAATAT
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               5023 13 -     15069 TAGGT-TTCAATAT
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              5157 13 +     14865 TAGGT-TTCAATAT
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                76574 13 +     78963 TAGAT-TTCAGTGT
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6847816 13 +  12164890 TATAT-TTCAATGT
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    667041 13 -   2312742 TATAT-TTCAACAT
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         2868 13 +     11805 TATAT-TTCAACAT
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           42204 13 +     52369 TATAT-TTCAACAT
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         34592 13 -     44753 TATAT-TTCAACAT
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            16514 13 +     27322 TATAT-TTCAACAT
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       16150 13 -     53241 TATAT-TTCAACAT
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         38422 13 -     48185 TATAT-TTCAACAT
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           33482 13 +     77221 tagat-ttcaaTTT
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            3035 13 -     27784 TAGAT-TCCAATAT
i Pteronotus_parnellii.KE867983.1                       I 3 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        245831 13 -    344369 CTGAG-ATTAACAT
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13245157 13 -  17261082 TAGAT-TCCAATAC
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             603108 13 -   3946241 TAGAT-TCCAATAC
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131533504 13 - 161321710 TTGAG-ATTAATAT
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             29141 13 +     56732 TAGGT-TTCAATAT
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6805632 13 +   6970761 TAGCT-TTCAATAT
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             5026 13 +     18040 TAGCT-TTCAATAT
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                14966 13 +     68503 CAGAC-TTCAATGG
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13914739 13 +  90463843 tagat-ttcAATAT
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1786982 13 +   2252614 TAGAT-TCCAATAT
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_1391695                           1254 13 -      1866 TAGGT-TTCAATAT
i Rhinopithecus_bieti.k119_1391695                      C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206376911 13 - 206558726 TAGGT-TTCAATAT
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44855811 13 -  45163003 TAGGT-TTCAATAT
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                18435 13 +    109198 TAGAT-TCTAATAC
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       7129 13 +     12214 CAGAC-TCCAATGT
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15671986 13 -  43202129 CAGAT-TTCACTAT
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        3903 13 +     34089 CAGAT-TTCACTAT
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              3844 13 -     60842 CAGAT-TTCACTAT
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              3939 13 +     67014 CAGAT-TTCACTAT
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              3917 13 +     60816 CAGAT-TTCACTAT
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 3854 13 -     76454 CAGAT-TTCACTGT
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17340579 13 -  30362882 CAGAT-TTCACTAT
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         19938 13 -     62485 CAGAT-TTCACTAT
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   31472 13 -    114521 GAGAT-TTCAAGAT
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        2638 13 +     15331 TAGGT-TTCAATAT
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       8035 13 +     20762 TAGGT-TTCAATAT
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         118037 13 +    130994 TAGGT-TTCAATGT
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           36824 13 +     46263 TAGGT-TTCAATAT
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     29938 13 +     42640 TAGGT-TTCAATAT
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        12982 13 +     30600 TAGGT-TTCAATAT
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   99526 13 -    120886 TTAAT-TTCCATAT
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            18043 13 +    739146 TTAAT-TTTAATAC
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2239001 13 +   2842873 TAAAT-TTCAACAC
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             233952 13 -    276980 TTGAG-ATTAATAT
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            26743 13 +     62062 TTGAG-ATTAATAA
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189271027 13 + 218635234 CAGAT-TACAATAT
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        14196 13 -  13920577 TAGAT-TTCAATAT
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               5205 13 -      6213 TAGAT-TCCAATAT
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 I 27
s Tamandua_tetradactyla.TamTet_scaffold_26877               13918 13 +     45698 TAGCT-TTCAATAT
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      806066 13 +   1148477 TAGAT-ATCAATAT
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  56757 13 +     99546 TAGAT-ATCAATAT
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               25714 13 +     42269 TACAT-TGCAACAT
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               59030 13 +     65473 TACAT-TGCAACAT
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194007042 13 - 194193292 TAGGT-TTCAATAT
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             38534 13 -     47444 TAGAT-TCCAGTAT
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  4768 13 +      6782 TAACT-TTCAATGT
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  135051 13 -    259118 TAGAT-TCCACCAT
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        26145 13 +     38948 TAGGT-TTCAATAT
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   19872 13 -     32910 TAGGT-TTCAATAT
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      1259 13 -     12939 TAGGT-TTCAATAT
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       1194 13 -     14244 TAGGT-TTCAATAT
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           42592 13 -     54611 TAGGT-TTCAATAT
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                         398 13 -     11566 TAGGT-TTCAATAT
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     2570 13 -     15592 TAGGT-TTCAATAT
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          1227 13 +     14371 TAGGT-TTCAATAT
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  50979 13 +     51589 TAGGT-TTCAATAT
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       14160 13 +     14732 TAGGT-TTCAATAT
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       4632 13 -     28054 TAGGT-TTCAATAT
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44659432 13 -  44834318 TAGGT-TTCAATAT
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       1735 13 +     13828 TAGGT-TTCAATAT
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   4344 11 +     90398 CTGAC-TTCAAT--
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16081733 13 +  31416278 cagct-ttcaacat
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2792114 11 -   3938065 T--AT-TTCAGCAT
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    4317 11 +     13056 T--AT-TTCAGCAT
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69312605 12 -  96451834 CAGAC--TCAATAC
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                    479 13 +     10241 GAGAT-TTCAAGGT
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6513960 13 +  28682327 ttgag-aaaaatat
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  4526 13 -     20643 TATAT-TTCAACAT
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             24067 13 -     33872 TATAT-TTCAACAT
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1523848 13 -   2331223 CAGAC-TTCATTAT
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                137469 13 -    281493 TTGAG-ATTTGTAT
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       126103 13 -    134049 TAGAT-TTCAACAC
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        213438 13 -    227762 TTGAG-ATTAATAT
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           6100 12 -      8775 CAGAC--CCAATAT
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Sorex_araneus.JH798170.1                               17750754 3364 -  27805282 I
e Dinomys_branickii.DinBra_scaffold_1996                   156356 54 +    228994 I
e Erinaceus_europaeus.JH835290.1                         11531598 1064 +  16010500 I
e Orycteropus_afer.OryAfe_flattened_line_13509              43378 16 -     66828 I
e Microgale_talazaci.MicTal_scaffold_34660                  30638 409 -     48017 I
e Manis_pentadactyla.KN017078.1                             35015 87 +     58827 I
e Manis_javanica.JSZB01003966.1                            144940 87 +    252755 I
e Elephantulus_edwardii.JH947210.1                        7804622 10712 +  15467074 I
e Echinops_telfairi.JH980316.1                           22994192 422 -  44670279 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     14107 296 -     20485 I
e Hylobates_pileatus_a.tarseq_592                             33341 34 -     60944 I
e Perodicticus_potto.k141_713187                            23970 79 -     27972 I
e Perodicticus_ibeanus.k141_117958                           4661 79 -     23713 I
e Otolemur_garnettii.GL873528.1                          18007674 78 -  38779656 I
e Otolemur_crassicaudatus.k141_321880                       38246 79 +     38679 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65668684 79 +  89412551 I
e Nycticebus_coucang.k141_2051882                            3075 79 +      6470 I
e Nycticebus_bengalensis.LG16                            65566346 79 -  95554990 I
e Loris_tardigradus.ctg97                                 3777661 79 +   6799190 I
e Loris_lydekkerianus.k141_550999                            9912 79 +     84689 I
e Galagoides_demidoff.k141_1769638                           9597 79 +     27357 I
e Galago_senegalensis.k141_964197                           12529 70 -     43889 I
e Galago_moholi.ctg555                                     210150 70 -    847004 I
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I
e Arctocebus_calabarensis.k141_587554                         266 79 +      9265 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               11195 24 +    209709 GTGTTAAAAG-----A-T--T---T-CT-G---G-AG-CTAG
s Acinonyx_jubatus.LLWD01000356.1                         2033179 25 +   3721120 GTGTTCAAAG-----A-T--A---TCTG-T---G-AC-CTAG
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    111849 23 -    189883 ATGTTCAAAG-----A-T--T---T-CT-A---G-AC-CT-G
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10656483 25 +  23371972 atattcaaag-----a-T--A---TATG-T---G-AC-CTTC
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7093622 25 -  16596857 ATATTCAAAG-----A-C--T---TCTG-T---G-AC-CTAC
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   12222 25 -     22067 ATTTTCAAAT-----ATA--a---g-ct-g---g-gc-atgg
i Allactaga_bullata.AllBul_scaffold_70162               C 0 I 3733
s Allenopithecus_nigroviridis.k141_2469532                    546 24 -     60446 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-CTAG
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         1267 24 -     29318 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-CTAG
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                          204 24 +     38766 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-CTAG
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          1161 24 -     80423 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-CTAG
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             9460 24 -     18050 ATGTTCAAAG-----A-T--A---T-CT-G---G-AG-GTAG
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                 10550 24 -     11521 ATGTTCAAAG-----G-T--A---T-CT-G---G-AG-GTAG
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                             10137 24 -     21359 ATGTTCAAAG-----A-T--A---T-CT-G---G-AG-GTAG
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_298055                                 1431 24 +      1823 ATGTTCAAAG-----A-T--A---T-CT-G---G-AG-GTAG
i Alouatta_juara.k141_298055                            C 0 C 0
s Alouatta_macconnelli.k141_1331706                          9433 24 -     10438 ATGTTCAAAG-----A-T--A---T-CT-G---G-AG-GTAG
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            6089 24 +      7047 ATGTTCAAAG-----A-T--A---T-CT-G---G-AG-GTAG
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             9369 24 +     10410 ATGTTCAAAG-----A-T--A---T-CT-G---G-AG-GTAG
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            3177 24 -      4927 ATGTTCAAAG-----A-T--A---T-CT-G---G-AG-GTAG
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             6106 24 +      6429 ATGTTCAAAG-----A-T--A---T-CT-G---G-AG-GTAG
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3519320 25 +   4113121 ATGTTCAAAG-----A-T--A---T-CT-G---T-GCCCTAT
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      389494 29 -    631301 ATGTTCAAAT-----A-TATATTTA-TG-G---C-CA-TTAA
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            29902 25 +     33004 ATGTTGAAAG-----A-T--A---T-CT-G---T-GCCCTAG
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 61819 24 +     78111 ATGTTCAAAG-----A-T--G---T-CT-G---G-AG-CTAG
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            4760 24 +     22701 ATGTTCAAAG-----A-T--G---T-CT-G---G-AG-CTAG
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5748717 24 +   9889416 ATGTTCAAAG-----A-T--G---T-CT-G---G-AG-CTAG
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             5304 24 -    104377 ACGTTCAAAG-----A-T--G---T-CT-G---G-AG-CTAG
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               5306 24 +     23246 ACGTTCAAAG-----A-T--G---T-CT-G---G-AG-CTAG
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     2948 24 +      5067 ACATTGAAAG-----A-A--A---A-AT-G---G-AC-CTGG
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 7897 27 -     29036 ATGTTCAACT-----A-T--ATCTG-TG-A---C-CA-TTAA
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9538565 24 +  39197703 ATGTTCAAAG-----A-T--A---T-CT-G---G-AG-CTAG
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             59836 24 +     85812 ATGTTCAAAG-----A-T--A---T-CT-G---G-AG-CTAG
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                10848 24 +     89302 ATGTTCAAAG-----A-T--A---T-CT-G---G-AG-CTAG
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             15353 24 -     58268 ATGTTCAAAG-----A-T--A---T-CT-G---G-AG-CTAG
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             63344 24 +    119057 ATGTTCAAAG-----A-T--A---T-CT-G---G-AG-CTAG
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               5313 24 -     25888 ATGTTCAAAG-----A-T--A---T-CT-G---G-AG-CTAG
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 5952 24 -     16375 ATGTTCAAAG-----A-T--A---T-CT-G---G-AC-CTAG
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              2272 24 +      2719 ATGTTCAAAG-----A-T--A---T-CT-G---G-AC-CTAG
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26379337 25 +  51448160 ACGTTCAAAG-----A-T--A---T-CC-A---T-GCCCTAG
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        4568 25 -     13118 ACGTTCAAAG-----A-T--A---T-CC-G---T-GCCCTAG
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   42383 25 -     72089 ATGTTCAAAG-----A-T--A---T-CT-G---T-GCCCTAG
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6559057 25 +   6870073 ATGTTCAAAG-----A-T--A---T-CT-G---T-GCCCTAG
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138139161 25 - 161108492 ATGTTCAAAG-----A-T--A---T-CT-G---T-GCCCTAG
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     571623 25 -    998990 ATGTTCAAAG-----A-T--A---T-CT-G---T-GCCCTAG
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136294894 25 - 158972876 ATGTTCAAAG-----A-T--A---T-CT-G---T-GCCCTAG
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1230661 25 -   1914593 ATGTTCAAGG-----A-T--A---T-CT-G---T-GCCCTAG
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               113206 24 -    171031 ATGTTCAAAG-----A-T--A---T-CT-G---G-AG-GTAG
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 12234 24 +    125063 ATGTTCAAAG-----A-T--A---T-CT-G---G-AG-GTAG
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                14279 24 -    216513 ATGTTCAAAG-----A-T--A---T-CT-G---G-AG-GTAG
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        6819 24 -    134917 ATGTTCAAAG-----A-T--A---T-CT-G---G-AG-GTAG
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3218754 25 -   8989139 ATGTTCAAAG-----A-T--C---T-CC-A---T-GACCTAG
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           396458 25 -  15254737 ATGTTCAAAG-----A-T--C---T-CC-A---T-GACCTAG
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2972191 25 +   6889770 ATGTTCAAAG-----A-T--C---T-CC-A---T-GACCTAG
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11518642 25 +  39901454 ATGTTCAAAG-----A-T--A---TCCG-T---G-AC-CTAG
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   13667 25 +     87036 ATGTTCAAAG-----A-T--A---TCCG-T---G-AC-CTAG
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11265309 25 -  35597290 ATGTTCAAAG-----A-T--A---TCCG-T---G-AC-CTag
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11087843 25 +  39895921 ATGTTCAAAG-----A-T--A---TCCG-T---G-AC-CTag
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16454858 25 -  44759192 ATGTTCAAAG-----A-T--A---TCCG-T---G-AC-CTag
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21324396 25 + 157394656 ATGTTCAAAG-----A-T--A---T-CT-G---T-GCCCTAG
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135705623 25 - 157403528 ATGTTCAAAG-----A-T--A---T-CT-G---T-GCCCTAG
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_979108                  1196 24 -      1248 TTGTTTGAAG-----C-T--C---T-CT-G---G-AC-ATGG
i Capromys_pilorides.CapPil_scaffold_979108             C 0 C 0
s Carlito_syrichta.NW_007248099.1                          308242 24 +    345090 ATGTTCAAAG-----A-T--A---T-CT-G---A-AC-CTAG
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               58695 27 +     67245 ATGTTCAAGT-----A-C--ATCTG-TG-A---C-CA-TTAA
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   29939 24 +     33760 ATGTTCAAGG-----A-T--A---T-CT-A---A-GC-CTAA
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   157951 25 -    276539 AAATTCAAAG-----A-T--A---T-CT-G---T-GACCTAG
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15785824 23 -  24422027 TTGTTCAAAG-----A-T--A---A-CT-G---G-A--ACAC
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15797758 23 -  24440124 TTGTTCAAAG-----A-T--A---T-CT-G---G-A--ACAC
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       175949 23 +    436027 TTGTTCAAAG-----A-T--A---T-CT-G---G-A--ACAC
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18890049 24 -  29618158 ATGTTCAAAG-----A-T--G---T-CT-G---G-AG-CTAA
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 7593 24 -     26817 ATGTTCAAAG-----A-T--G---T-CT-G---G-AG-CTAA
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                11833 24 +     25043 ATGTTCAAAG-----A-T--G---T-CT-G---G-AG-CTAA
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         7275 24 +     21754 ATGTTCAAAG-----A-T--A---T-CT-G---A-AC-CTAG
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4363059 25 +   7569818 ATGTTCAAAG-----A-T--A---TCTG-T---G-AC-CTAC
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         2811 25 -      9338 ATGTTCAAAG-----A-T--A---TCTG-T---G-AC-CTAC
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6554489 24 +   6739814 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-CTAG
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      25966 24 +     60454 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-CTAG
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          1171 24 -     21101 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-CTAG
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         58481 24 -    107033 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-CTAG
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        1373 24 -     17608 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-CTAG
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          28868 24 +     30494 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-CTAG
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          57714 24 -     59240 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-CCAG
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          1415 24 +     16677 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-CTAG
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           23573 24 +     35983 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-CCAG
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11990101 24 +  12117833 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-CTAG
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46476859 24 +  46592721 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-CCAG
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      40410 24 -     45581 ATGTTAAAGG-----A-T--A---T-AT-G---G-AG-CCAG
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       1416 24 +     35577 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-CTAG
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        1192 24 -     25661 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-CTAG
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        1170 24 -     17744 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-CCAG
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        20786 24 +     37128 ATGTTAAAGG-----A-T--A---T-CT-G---A-AG-CTAG
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           2018 25 -      6963 ATGTTCAAAG-----A-T--A---T-TTAT---G-AC-CTGG
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           58249 24 -     68416 ATGTTCAAAG-----A-T--A---T-CT-G---G-AC-CTAG
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            7292 24 +     13308 ATGTTCAAAG-----A-T--A---T-CT-G---G-AC-CTAG
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             4849 24 -     18223 ATGTTCAAAG-----A-T--A---T-CT-G---G-AG-CTAG
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             21872 24 +     25473 ATGTTCAAAG-----A-T--A---T-CT-G---G-AG-CTAG
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           40907 24 +     57117 ATGTTCAAAG-----A-T--A---T-CT-G---G-AG-CTAG
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          45586 24 +     54541 ATGTTCAAAG-----A-T--A---T-CT-G---G-AG-CTAG
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15960971 22 +  43084221 TTGTTCAAAG-----A-T--A---T-CT-G---G-AC-AT--
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         70408 24 +    196370 ATGTTCAAAG-----A-T--A---T-CT-G---G-AG-CTAG
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          14588 24 +     40510 ATGTTCAAAG-----A-T--A---T-CT-G---G-AG-CTAG
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15138332 24 -  15256731 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-CTAG
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      33379 24 -     53260 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-CTAG
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101143943 24 + 101219884 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-CTAG
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                15698 25 -     21363 ATGTTCAAAG-----A-C--A---T-CTAT---G-AC-TTGG
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           761005 25 +    964067 ATGTTCAAAG-----A-C--A---T-CTAT---A-AC-CTGG
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10885709 24 +  10971483 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-CTAG
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147663873 24 + 156195979 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-CTAG
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            15858 24 +     23629 ATGTTAAAGG-----G-T--A---T-CT-G---G-AG-CTAG
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60612680 25 +  78930452 CAGTTCAGGG-----A-T--A---CCTG-A---T-AT-CTAA
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         38872 25 -     40477 atattcaaag-----a-t--acctg-tg-a---c-a---TAG
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     I 85 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 277757 24 -    399297 ATGTTCAAAG-----A-T--T---T-CT-A---G-AC-CTAG
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53028432 24 +  72327488 ATGTGCAAAG-----A-T--T---T-CT-A---A-AC-CTAG
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            51190 25 -     70449 ATGTTCAAAG-----A-T--A---TCTA-T---G-AC-CTAG
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  207384 24 -    956709 GTCCTTAATG-----A-T--A---T-CT-G---C-AT-GCAA
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 29972 24 -     67205 TCAGTCAAAG-----C-T--A---T-AT-G---G-AC-ATGG
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                16980 24 +     26546 TTGTTCAAAG-----A-T--A---T-CT-G---G-AC-ATAG
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             58071 22 -    236241 TTGTTCAAAG-----A-T--A---T-TT-G---A-AC-AT--
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          182855 25 -   6883506 ATGTTCAAAG-----A-T--A---T-CTAT---G-AC-CTGG
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16844108 24 +  31942871 ATGTTCAAAG-----A-T--A---T-CT-G---G-AT-CTAG
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80036015 25 -  96802777 ATGTTCGAAG-----A-T--A---T-CC-G---T-GCCCTAG
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18698004 27 -  18957592 ATGTTCAAAT-----A-T--ATCTG-TC-A---T-CA-TTAA
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 321708 25 +    993696 ATGTTTAAAG-----A-T--A---TCTG-T---G-ac-ctac
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   2358 25 +    151128 ATGTTCAAAG-----A-T--A---TCTG-T---A-AC-CTAC
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dipodomys_ordii.KN672545.1                              3655366 11 +   4240102 GTGTTTAAAG-----A--------------------------
i Dipodomys_ordii.KN672545.1                            C 0 I 11
s Dipodomys_stephensi.DipSte_scaffold_44365                 26999 11 +     28912 GTGTTTAAAG-----A--------------------------
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 I 11
s Dolichotis_patagonum.DolPat_scaffold_14102                35320 24 -     73477 TTGTTCAAAG-----A-T--A---T-GT-G---G-AC-ATAT
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Eidolon_helvum.KE772537.1                                 11361 20 +     24177 -----CAAGG-----G-T--ATCTG-TG-A---t-c---tag
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1490671 25 +   1727528 ATGTTCAAAG-----A-T--A---T-CT-G---T-GCCCTAG
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        238991 24 -    369425 ATGTTCAAAG-----A-T--T---T-CT-A---A-AC-CTAG
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           6104 24 -      7838 ATGTTCAAAG-----A-T--T---T-CT-A---A-AC-CTAG
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85871356 25 +  99434291 ATGTGCAAAG-----A-T--A---TCTG-T---G-AC-Ctac
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4703385 27 +   6522550 ATGCTCAAAT-----A-T--ATTTG-TG-G---C-CA-TTAA
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5852111 25 -   7175178 ATGTTCAAAG-----A-T--A---TCTG-T---G-AC-CCAG
i Equus_asinus.JREZ01000062.1                           I 2 C 0
s Equus_caballus.CM000402.2                              13350614 25 +  41866177 ATGTTCAAAG-----A-T--A---TCTG-T---G-AC-CCAG
i Equus_caballus.CM000402.2                             I 2 C 0
s Equus_przewalskii.ATBW01073585.1                          12104 25 +     92910 ATGTTCAAAG-----A-T--A---TCTG-T---G-AC-CCAG
i Equus_przewalskii.ATBW01073585.1                      I 2 C 0
s Erythrocebus_patas.Contig8                             48770510 24 -  48907691 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-CTAG
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          314221 25 +    330699 ACGTTCAAAG-----A-T--A---T-CC-G---T-GCCCTAG
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             60675 25 +     89355 ATGTTCAAAG-----A-T--A---T-CC-A---T-GCCCTAG
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              4294 24 +     13586 ATGTACAAAG-----A-T--A---T-CT-G---G-AC-CTAG
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               4231 24 -      6809 ATGTCCAAAG-----A-T--A---T-CT-G---G-AC-CTAG
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            10704 24 +     36558 ATGTCCAAAG-----A-T--A---T-CT-G---G-AC-CTAG
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             7023 24 +     60246 ATGTCCAAAG-----A-T--A---T-CT-G---G-AC-CTAG
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                10502 24 +    109717 ATGTACAAAG-----A-T--A---T-CT-G---G-AC-CTAG
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               14885 24 +     16540 ATGTCCAAAG-----A-T--A---T-CT-G---G-AC-CTAG
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                15158 24 +     27497 ATGTCCAAAG-----A-T--A---T-CT-G---G-AC-CTAG
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           17615 24 +     26808 ATGTCCAAAG-----A-T--A---T-CT-G---G-AC-CTAG
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                32350 24 +     46535 ATGTACAAAG-----A-T--A---T-CT-G---G-AC-CTAG
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              15072 24 -     29447 ATGTACAAAG-----A-T--A---T-CT-G---G-AC-CTAG
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129892155 25 - 159252932 GTGTTCAAAG-----A-T--A---TCTG-T---G-AC-CTAG
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129279224 25 - 158578461 GTGTTCAAAG-----A-T--A---TCTG-T---G-AC-CTAG
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 20369 25 +     52776 GTGTTCAAAG-----A-T--A---TCTG-T---G-AC-CTAG
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               155511 24 +    324696 ATGTTTAAAA-----A-T--A---T-CC-A---G-AC-ATGG
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    180470 25 -    189561 ATGTTCAAAG-----A-T--A---T-CT-G---T-GCCCtag
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           12343 24 -     18683 ATGTTCAAAG-----A-A--A---G-TT-G---G-AC-ATAG
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               4575 24 -     14630 ATGTTAAAAG-----A-T--A---T-CT-G---G-AG-CCAG
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119651674 24 - 195582420 ATGTTAAAAG-----A-T--A---T-CT-G---G-AG-CCAG
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   76833 24 +    118900 ATGTCCAAAG-----A-A--A---G-CT-G---G-AT-GTAG
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         1088 24 +     10286 ATGTCCAAAG-----A-T--A---T-CT-A---G-AC-CTAG
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_1254239                            9264 24 +      9690 ATGTCCAAAG-----A-T--A---T-CT-A---G-AC-CTAG
i Hapalemur_gilberti.k141_1254239                       C 0 C 0
s Hapalemur_griseus.k141_1387522                             4894 24 +     56096 ATGTCCAAAG-----A-T--A---T-CT-A---G-AC-CTAG
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        28144 24 -     42470 ATGTCCAAAG-----A-T--A---T-CT-A---G-AC-CTAG
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        44767 24 -     54384 ATGTCCAAAG-----A-T--A---T-CT-A---G-AC-CTAG
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              16396 25 +     53719 ATGTTCAAAG-----A-T--A---TCTA-T---G-AC-CTAG
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                26668 25 -     91191 ATGTTCAAAG-----A-T--A---T-CT-G---T-GCCCTAG
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2550304 24 +  31725842 TTGTTCAAAG-----A-T--A---T-CG-T---G-GC-ACGG
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               56723 25 +     73687 CTGTTTCAAG-----A-T--A---T-CT-GT--G-AC-TTTG
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              146297 25 +    277961 ATGTTCAAAG-----A-T--A---T-CT-G---T-GCCCTAG
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      277590 22 -    477199 ACATTCAAAG-----A-C--CTCTG-TG-A---C-A------
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              6742 22 -      9143 ACATTCAAAG-----A-C--ATCTG-TG-A---C-A------
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      3981 24 -   7690867 ATGTTAAAAG-----A-T--A---T-CT-G---G-AG-CTAG
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 16481 25 -     67322 ATGTTCAAAA-----A-T--A---TCTA-T---G-AC-CTAG
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           18199 24 -    119109 TTGTTCAAAG-----A-T--A---T-CT-G---G-AC-TTAG
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              4407 24 +      5897 ATGTTAAAAG-----A-T--A---T-CT-G---G-AG-CTAG
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_624065                               1271 24 +      2112 ATGTTAAAAG-----A-T--A---T-CT-G---G-AG-CTAG
i Hylobates_agilis.k141_624065                          C 0 C 0
s Hylobates_klossii.k141_466549                             10847 24 +     11537 ATGTTAAAAG-----A-T--A---T-CT-G---G-AG-CTAG
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14623952 24 -  25970782 ATGTTAAAAG-----A-T--A---T-CT-G---G-AG-CTAG
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            1208 24 -      2977 ATGTTAAAAG-----A-T--A---T-CT-G---G-AG-CTAG
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     5373 14 +     22540 TTGTTCAAAG-----A-T--G---T-----------------
i Hystrix_cristata.HysCri_scaffold_50788                C 0 I 4
s Ictidomys_tridecemlineatus.JH393315.1                   7125094 24 +  13083262 ACATTGGAGG-----A-A--A--AA-AT-G---G-A--TTGG
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_4418183                                    714 24 -      1457 ATGTTCAAAG-----A-T--A---T-CT-G---G-AC-CTAG
i Indri_indri.k141_4418183                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               8215 25 +     17520 ATGTTCAAAG-----A-T--A---T-CC-G---T-GCCCTAG
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8564971 11 +  11848649 attttcaaat-----a--------------------------
i Jaculus_jaculus.JH725517.1                            C 0 I 17
s Kogia_breviceps.KogBre_flattened_line_35920               22835 25 +     37189 ATGTTCAAAG-----A-T--A---T-CC-G---T-GCCCTAG
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          49429 24 -    147782 ATGTTCAAAG-----A-T--A---T-CT-G---G-AG-CTAG
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   113483 13 -    115756 ATGCTCAAAT-----A-T--A---------------------
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 I 13
s Lemur_catta.scaffold_1                                258406448 24 - 285822530 ATGTCCAAAG-----A-T--A---T-TT-G---G-AC-CTAG
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        23204 24 +     39228 ATGTTCAAAG-----A-T--A---T-CT-T---G-AC-CTAG
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            52579 24 +     63517 ATGTTCAAAG-----A-T--A---T-CT-T---G-AC-CTAG
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        77829 24 +    116806 ATGTTCAAAG-----A-T--A---T-CT-T---G-TC-CTAG
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     30843 24 -     33031 ATGTTCAAAG-----A-T--A---T-CT-T---G-AC-CTAG
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3085157 25 -   3498232 atatgcaaag-----a-t--a---tCTG-T---G-AC-CTac
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    12195 24 +     22452 ACATTTCAGT-----A-T--C---T-CT-G---G-AT-ATAT
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            135168 25 +   3060487 ATGTTCAAAG-----A-T--A---T-CC-G---T-GCCCTAG
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19247578 24 +  19376315 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-CTAG
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loxodonta_africana.GL010040.1                          20591294 25 -  62548349 atgttcaaag-----a-t--a---t-ct-g--tg-ac-ccaa
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11087299 25 +  39895028 ATGTTCAAAG-----A-T--A---TCCG-T---G-AC-CTag
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             19318 24 +     74745 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-CTAA
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12705774 24 +  12821369 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-CTAG
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                1419 24 -      3136 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-CTAG
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           46236 24 +     63263 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-CTAG
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                  939 24 -      2568 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-CTAG
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 1525 24 -      7381 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-CTAG
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  44743 24 -     79256 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-CTAG
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196034851 24 + 196197964 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-CTAG
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11445019 24 +  11645122 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-CTAG
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   3690 24 -     46448 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-CTAG
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                1362 24 -     13212 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-CTAG
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 15043 24 -     55006 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-CTAG
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43840160 24 +  43892939 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-CTAG
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               16329 24 -     24607 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-CTAG
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               3695 24 -     27140 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-CTAG
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                700784 25 +    802869 ATGTTCAAGG-----G-T--ATTTG-TG-A---T-C---TAG
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43436737 24 -  43563597 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-CTAG
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4449563 24 -   4543643 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-CTAG
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36872932 24 +  64221397 ACATTGGAGG-----T-C--A--AA-AT-G---G-A--TTGG
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       63593 25 -    234502 ATGTTCAAGG-----A-T--ATGTG-TG-A---C-C---TAC
i Megaderma_lyra.MegLyr_scaffold_3562                   I 2 C 0
s Mellivora_capensis.MelCap_flattened_line_15433              170 25 -     87323 GTATGCAAAG-----A-T--A---TCTG-T---G-AC-CTAC
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               11941 23 +     15977 ATGTTCAAAG-----A-A--T---T-CT-A---G-AC-CT-G
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1046141 24 -  26018355 ATGTTCAAAG-----A-G--T---T-CT-G---A-AC-CTAG
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Microcebus_murinus.CM007691.1                          16509458 24 +  47401472 ATGTTCAAAG-----A-T--A---T-CT-G---G-AC-CTGG
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               21879 27 -     32043 ATGTTCAAAT-----A-T--ATCTG-TG-A---C-CA-TTAA
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22819284 24 -  98408828 ATGTTCAAAG-----A-T--T---T-CT-C---A-AC-CTAG
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8208875 27 +  10048721 ATGTTCAAAT-----A-T--ATCTG-TG-A---C-CA-TTAA
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            33527 27 +     45743 ATATTCAAAT-----A-T--ATCTG-TG-A---C-CA-TTAA
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         1290 24 +     29742 ATGTTAAAGG-----G-T--A---T-CT-G---G-AG-CTAG
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        10670 25 -    104932 ATATGCAAAG-----A-T--A---TCTG-T---G-AC-CTAC
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     4848 24 +      8497 ATGTTCAAAG-----A-T--A---T-CT-G---G-AC-CTGG
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 145603 25 +    154973 ATGTTCGAAG-----A-T--A---T-CC-G---T-GCCCTAG
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                160390 27 +    265003 ATGTTCAAAT-----A-T--ATCTG-TG-A---C-CT-TTAG
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_146101                 3771 25 -      4346 CTGTTCAAAG-----A-T--A---T-CT-G---T-GCCCTAG
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  144092 25 -    168139 ATGTTCAAAG-----A-T--A---TCTA-T---G-AC-CTAG
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          18746 27 -    100666 ATGCTCAAAT-----A-T--ATCTG-TG-A---C-CA-TTAA
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70765798 23 +  92629107 atattcaaag-----a-t--t---t-at-a---G-AC-CT-C
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75488862 23 +  98207768 atatTCAAAG-----A-T--T---T-TT-A---G-AC-CT-C
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67555083 23 +  89017189 atattcaaag-----a-t--t---t-ct-A---G-AC-ct-c
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74330038 23 +  97876770 atatTCAAAG-----A-T--T---T-CT-A---G-AC-CT-C
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             10858 24 +     98495 ATCTTCAAAG-----A-A--A---T-CT-A---G-AT-ATGG
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4423535 25 -  28371801 ATGTGCAAAG-----A-T--A---TCTG-T---G-AC-CTac
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     89255 24 -    117718 TTGTTCAAAG-----C-T--C---T-CT-G---G-AC-ATGG
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               967041 27 +   8389877 ATGCTCAAAT-----A-T--ATCTG-TG-A---C-CA-TTAA
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5018717 27 +   6462685 ATGCTCAAAT-----A-T--ATCTG-TG-A---C-CA-TTAA
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3464621 27 -   3747815 ATGCTCAAAT-----A-T--ATCTG-TG-A---C-CA-TTAA
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                         9836 27 +     66751 ATGCTCAAAT-----A-T--ATCTG-TG-A---C-CA-TTAA
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             4255 25 -      8794 ATGTTCAAAG-----T-C--T---T-CTAT---G-TG-CTGG
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            117662  7 +    362372 ---------------------------------G-TC-CTAC
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               7792 24 +     48152 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-CTAG
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4484062 25 -  14209539 atatgcaaag-----a-t--a---tCTG-T---G-AC-CTac
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3950218 25 -   4490290 ATGTTCGAAG-----A-T--A---T-CC-G---T-GCCCTAG
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  48492 27 +     94413 ATGTTCAAAC-----A-T--GTCTG-TG-G---C-CA-TTCA
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_302224                            1249 24 +      1516 ATGTTAAAAG-----A-T--A---T-CT-G---G-AG-CTAG
i Nomascus_annamensis.k141_302224                       I 13 C 0
s Nomascus_concolor.k141_226614                               509 24 -      5092 ATGTTAAAAG-----A-T--A---T-CT-G---G-AG-CTAG
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_642452                            1292 24 +      2851 ATGTTAAAAG-----A-T--A---T-CT-G---G-AG-CTAG
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             24227 24 -  18771707 ATGTTAAAAG-----A-T--A---T-CT-G---G-AG-CTAG
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  1930 24 +      4512 ATGTTAAAAG-----A-T--A---T-CT-G---G-AG-CTAG
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                30104 25 +   3668941 ATGTTCAAAG-----A-T--A---TCCG-T---G-AC-CTag
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Ochotona_princeps.JH802095.1                            4995281 24 -  23139505 GTGTTTCAGT-----A-T--C---T-AA-G---G-AT-ATAG
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3684796 24 +  10294119 ttgttcaaag-----c-t--a---t-ct-g---g-ac-acag
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             678725 25 -   3126709 ATATTCAAAG-----G-T--A---TCTG-T---G-AC-CTac
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1078902 25 +   1425656 ATGTTCAAAG-----A-T--A---T-CT-G---T-GCCCTAG
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         36196 25 +     78940 ATGTTCAAAG-----A-T--A---T-CT-G---T-GCCCTAG
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  124541 24 +    145789 ATGTTCAAAG-----A-T--T---T-CT-A---A-AC-CTAT
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  36342 24 +     62360 ATGTTCAAAG-----A-T--T---T-CT-C---T-AC-CTAG
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7223900 25 -   7562323 ATGTTCAAAG-----A-T--A---T-CC-G---T-GCCCTAG
i Orcinus_orca.KB316965.1                               C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141875215 24 + 163896628 ACATTTCAGT-----A-T--C---T-Ct-g---g-at-atat
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      307385 25 -    505867 ATGTTCAAAG-----A-T--A---TCCG-T---G-AC-CTag
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Ovis_aries.CM001582.2                                 134076462 25 - 275406953 ATGTTCAAAG-----A-T--A---T-CT-G---T-GCCCTAG
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      77676 25 +    140051 ATGTTCAAAG-----A-T--A---T-CT-G---T-GCGCTAG
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.AJFE02000033.1                                 265 24 -      1012 ATGTTAAAAG-----A-T--A---T-CT-G---G-AG-CTAG
i Pan_paniscus.AJFE02000033.1                           I 54 I 3
s Pan_troglodytes.NBAG03003562.1                            12402 24 +     18198 ATGTTAAAAG-----A-T--A---T-CT-G---G-AG-CTAG
i Pan_troglodytes.NBAG03003562.1                        I 150 I 3
s Panthera_onca.PanOnc_flattened_line_1615                  33537 25 +    295523 GTGTTCAAAG-----A-T--A---TCTG-T---G-AC-CTAG
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3637273 25 +  18214204 GTGTTCAAAG-----A-T--A---TCTG-T---G-AC-CTAG
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5026932 25 -   6340057 GTGTTCAAAG-----A-T--A---TCTG-T---G-AC-CTAG
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1065323 25 -   1292953 ATGTTCAAAG-----A-T--A---T-CT-G---T-GCCCTAT
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188155528 24 - 188283584 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-CTAG
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             3845 24 +      5367 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-GTAG
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47512916 24 +  47705337 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-CTAG
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 66894 24 -    104429 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-GTAG
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    5426 24 +     14967 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-CTAG
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 1287 24 -      7628 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-CTAG
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    114965 25 -    135482 ATGCTCAAAT-----A-T--A---TCTG-T---G-AC-CTAG
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      42841 11 -     45160 GTGTTTAAAG-----A--------------------------
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 I 11
s Peromyscus_maniculatus.KI615518.1                       4949574 24 -   8017169 ATGTTCAAAG-----A-T--T---T-CT-C---A-AC-CTAG
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    11732 23 -     36578 TTATTCAAAG-----A-T--A---C--T-G---G-AC-TTGG
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            120517 25 -    122454 ATGTTCGAAG-----A-T--A---T-CC-G---T-GCCCTAG
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1987485                           1314 24 -      5908 ATGCTGAAGG-----A-T--A---T-CT-G---G-AG-CTAG
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       1934 24 -     17985 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-CTAG
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            1301 24 +      7694 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-CTAG
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26739779 24 +  26888534 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-TTAG
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            96690 27 +    112873 ATGATCAAAT-----A-T--ATTTG-TG-A---C-CA-TTAT
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             42911 24 -     61926 GTGTTCAAAG-----A-T--A---T-CT-G---G-AG-CTAG
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        24342 24 +     78826 ATGTTCAAAG-----A-T--A---T-CT-G---G-AG-CTAG
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              8291 24 -     15800 ATGTTCAAAG-----A-T--A---T-CT-G---G-AG-CTAG
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        11489 24 -     16101 ATGTTCAAAG-----A-T--A---T-CT-G---G-AG-CTAG
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          4798 24 +      9673 ATGTTCAAAG-----A-T--A---T-CT-G---G-AG-CTAG
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13473794 24 -  19735023 ATGTTCAAAG-----A-T--A---T-CT-G---G-AG-CTAG
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           12700 24 -     31692 ATGTTCAAAG-----A-T--A---T-CT-G---G-AG-CTAG
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           4587 25 +     21690 ATGTTCAGAG-----A-T--A---T-CC-A---T-GCCCTAG
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       22133 24 +     44506 ATATTCAAAG-----A-T--A---T-CT-G---G-AG-CTAG
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        22345 24 +     67491 ATGTTCAAAG-----A-T--A---T-CT-G---G-AG-CTAG
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      12584 24 -     98129 ATGTTCAAAG-----A-T--A---T-CT-G---G-AG-CTAG
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     22184 24 +    147771 ATGTTCAAAG-----A-T--A---T-CT-G---G-AG-CTAG
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        22439 24 -     23762 ATGTTCAAAG-----A-T--A---T-CT-G---G-AG-CTAG
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          2905 24 -     55515 ATGTTCAAAG-----A-T--A---T-CT-G---G-AG-CTAG
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         22258 24 +    152463 ATGTTCAAAG-----A-T--A---T-CT-G---G-AG-CTAG
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_miltoni.k141_841561                         11980 24 +    134592 ATGTTCAAAG-----A-T--A---T-CT-G---G-AG-CTAG
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          22568 24 -     75465 ATGTTCAAAG-----A-T--A---T-CT-G---G-AG-CTAG
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              186460 24 -    373494 ATGTTAAAAG-----A-T--A---T-CT-G---G-AG-CTAG
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19807108 24 +  19899266 ATGTTAAAAG-----A-T--A---T-CT-G---G-AG-CTAG
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               5036 24 -     15069 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-CTAG
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              5170 24 +     14865 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-CTAG
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                76587 25 +     78963 CTGTTTCAAG-----A-T--A---T-CT-GT--G-AC-TTTG
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6847829 24 +  12164890 ATGTCCAAAG-----A-T--A---T-CT-A---G-AC-CTAG
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    667054 24 -   2312742 ATGTTCAAAG-----A-T--A---T-CT-G---G-AC-CTAG
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         2881 24 +     11805 ATGTTCAAAG-----A-T--A---T-CT-G---G-AC-CTAG
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           42217 25 +     52369 ATGTTCAAAG-----A-T--A---T-CT-G---GGAC-CTAG
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         34605 25 -     44753 ATGTTCAAAG-----A-T--A---T-CT-G---GGAC-CTAG
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            16527 25 +     27322 ATGTTCAAAG-----A-T--A---T-CT-G---GGAC-CTAG
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       16163 24 -     53241 ATGTTCAAAG-----A-T--A---T-CT-G---G-AC-CTAG
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         38435 24 -     48185 ATGTTCAAAG-----A-T--A---T-CT-G---G-AC-CTAG
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           33495 23 +     77221 ATGTTCAAAG-----A-A--T---T-CT-A---G-AC-Ct-g
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            3048 27 -     27784 ATGTTCAAAT-----A-T--ACCTG-TG-A---C-CA-TTAG
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        245844 25 -    344369 ATGTGCAAAG-----A-T--A---TCTG-T---A-AC-CTAC
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13245170 25 -  17261082 ATGTTCAAGG-----G-T--ATCTG-Tg-a---t-c---tag
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             603121 25 -   3946241 ATGTTCAAGG-----G-T--ATCTG-TG-A---T-C---TAG
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131533517 25 - 161321710 GTGTTCAAAG-----A-T--A---TCTG-T---G-AC-CTAG
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             29154 24 +     56732 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-CTAG
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6805645 24 +   6970761 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-CTAG
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             5039 24 +     18040 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-CTAG
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                14979 25 +     68503 ATGTTCAAAG-----A-T--A---T-CT-G---T-GCCCTAG
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13914752 23 +  90463843 ATATTCAAAG-----A-T--T---T-CT-A---G-AC-CT-C
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1786995 25 +   2252614 ATGTTCAAAG-----A-C--ATCTG-TG-A---C-C---TAG
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_1391695                           1267 24 -      1866 ATGTTAAAAG-----A-T--A---T-CT-G---G-AG-CTAG
i Rhinopithecus_bieti.k119_1391695                      C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206376924 24 - 206558726 ATGTTAAAAG-----A-T--A---T-CT-G---G-AG-CTAG
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44855824 24 -  45163003 ATGTTAAAAG-----A-T--A---T-CT-G---G-AG-CTAG
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                18448 25 +    109198 ATGTTCATGG-----G-T--ATCTG-TG-A---T-C---TAG
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       7142 25 +     12214 ATGTTCAAAG-----A-T--A---T-CT-G---T-GCCCTAG
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15671999 24 -  43202129 ATGTTCAAAG-----A-T--G---T-CT-G---G-AG-CTAG
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        3916 24 +     34089 ATGTTCAAAG-----A-T--G---T-CT-G---G-AG-CTAG
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              3857 24 -     60842 ATGTTCAAAG-----A-T--G---T-CT-G---G-AG-CTAG
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              3952 24 +     67014 ATGTTCAAAG-----A-T--G---T-CT-G---G-AG-CTAG
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              3930 24 +     60816 ATGTTCAAAG-----A-T--G---T-CT-G---G-AG-CTAG
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 3867 24 -     76454 ATGTTCAAAG-----A-T--G---T-CT-G---G-AG-CTAG
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17340592 24 -  30362882 ATGTTCAAAG-----A-T--G---T-CT-G---G-AG-CTAA
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         19951 24 -     62485 ATGTTCAAAG-----A-T--G---T-CT-G---G-AG-CTAA
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   31485 25 -    114521 AGGTTCAAGG-----A-T--A---CCTG-T---G-AT-CTAG
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        2651 24 +     15331 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-CTAG
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       8048 24 +     20762 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-CTAG
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         118050 24 +    130994 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-CTAG
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           36837 24 +     46263 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-CTAG
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     29951 24 +     42640 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-CTAG
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        12995 24 +     30600 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-CTAG
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   99539 24 -    120886 ATGTTCAAAG-----A-T--T---T-CT-A---A-GC-CTAG
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            18056 24 +    739146 ACGTTCAAAG-----A-T--A---T-TG-T---G-AC-TTAG
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2239014 24 +   2842873 ACATTGGAGG-----A-A--A--AA-AT-G---G-A--TTGG
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             233965 25 -    276980 ATATTCAAAG-----A-C--A---TCTG-T---G-AC-CTAC
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            26756 25 +     62062 ATGTTCAAAG-----A-T--A---TCTA-T---G-AC-CTAG
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189271040 25 + 218635234 ATGTTCAAAG-----A-T--A---T-CT-A---C-AACCtag
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        14209 24 -  13920577 ATGTTAAAAG-----A-T--A---T-CT-G---G-AG-CTAG
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_148405               5068 27 -      6063 ATGTTCAAAT-----A-T--ATCTG-TG-A---C-CA-TTAA
i Tadarida_brasiliensis.TadBra_scaffold_148405          I 61 I 232
s Tamandua_tetradactyla.TamTet_scaffold_26877               13931 25 +     45698 ATGCTCAAAG-----T-C--T---T-CTAC---A-TG-CTGG
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      806079 25 +   1148477 ATGTTCAAAG-----A-T--A---TCTG-T---G-AC-CTAG
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  56770 25 +     99546 ATGTTCAAAG-----A-T--A---TCTG-T---G-AC-CTAG
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               25727 24 +     42269 ATGTTCAAAG-----A-T--A---T-CT-G---A-AC-CTAG
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               59043 24 +     65473 ATGTTCAAAG-----A-T--A---T-CT-G---A-AC-CTAG
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194007055 24 - 194193292 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-CTAG
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             38547 24 -     47444 TTATTCAAAG-----A-T--G---T-CC-A---G-AC-TTGC
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  4781 14 +      6782 ATGTTCAAAG-----A-T--A---T-----------------
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  135064 27 -    259118 ATGTTCAAAT-----A-T--ATCTG-TG-A---C-CA-TTAA
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        26158 24 +     38948 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-CTAG
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   19885 24 -     32910 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-CTAG
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      1272 24 -     12939 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-CTAG
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       1207 24 -     14244 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-CTAG
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           42605 24 -     54611 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-CTAG
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                         411 24 -     11566 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-CTAG
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     2583 24 -     15592 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-CTAG
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          1240 24 +     14371 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-CTAG
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  50992 24 +     51589 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-CTAG
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       14173 24 +     14732 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-CTAG
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       4645 24 -     28054 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-CTAG
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44659445 24 -  44834318 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-CTAG
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       1748 24 +     13828 ATGTTAAAGG-----A-T--A---T-CT-G---G-AG-CTAG
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   4355 25 +     90398 ATCTTCAAAG-----A-T--A---T-CT-C---T-GCCCTAG
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16081746 25 +  31416278 atgttcaaag-----a-t--a---t-ct-g--tg-ac-ccaa
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2792125 24 -   3938065 ATGCTCAGTA-----A-T--A---T-CT-G---G-TC-CTAG
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    4328 24 +     13056 ATGCTCAGTA-----A-T--A---T-CT-G---G-CC-CTAG
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69312617 25 -  96451834 ATGTTCAAAG-----A-T--A---T-CC-G---T-GCCCTAG
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                    492 28 +     10241 AAGTCCAAAG-----A-C--T---GATG-ATACT-AT-TTAG
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6513973 25 +  28682327 atattcaaag-----a-t--a---TCTG-T---G-AC-CTAC
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  4539 24 -     20643 ATGTTCAAAG-----A-T--A---T-CT-G---G-AC-CTAG
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             24080 24 -     33872 ATGTTCAAAG-----A-T--A---T-CT-G---G-AC-CTAG
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1523861 25 -   2331223 ATGTTCAAAG-----A-T--C---T-CC-A---T-GACCTAG
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                137482 25 -    281493 ATGTTCAAAG-----A-T--A---TCCG-T---G-AC-CTAG
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       126116 30 -    134049 ACATTGGAAAATAAAA-A--A--AA-GT-G---G-AC-CTGA
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        213451 25 -    227762 ATGTTCAAAG-----G-T--A---TCTG-T---G-AC-CTAC
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           6112 25 -      8775 ATGTTCAAAG-----A-T--A---T-CC-G---T-GCCCTAG
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Sorex_araneus.JH798170.1                               17750754 3364 -  27805282 I
e Dinomys_branickii.DinBra_scaffold_1996                   156356 54 +    228994 I
e Erinaceus_europaeus.JH835290.1                         11531598 1064 +  16010500 I
e Orycteropus_afer.OryAfe_flattened_line_13509              43378 16 -     66828 I
e Microgale_talazaci.MicTal_scaffold_34660                  30638 409 -     48017 I
e Manis_pentadactyla.KN017078.1                             35015 87 +     58827 I
e Manis_javanica.JSZB01003966.1                            144940 87 +    252755 I
e Elephantulus_edwardii.JH947210.1                        7804622 10712 +  15467074 I
e Echinops_telfairi.JH980316.1                           22994192 422 -  44670279 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     14107 296 -     20485 I
e Hylobates_pileatus_a.tarseq_592                             33341 34 -     60944 I
e Perodicticus_potto.k141_713187                            23970 79 -     27972 I
e Perodicticus_ibeanus.k141_117958                           4661 79 -     23713 I
e Otolemur_garnettii.GL873528.1                          18007674 78 -  38779656 I
e Otolemur_crassicaudatus.k141_321880                       38246 79 +     38679 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65668684 79 +  89412551 I
e Nycticebus_coucang.k141_2051882                            3075 79 +      6470 I
e Nycticebus_bengalensis.LG16                            65566346 79 -  95554990 I
e Loris_tardigradus.ctg97                                 3777661 79 +   6799190 I
e Loris_lydekkerianus.k141_550999                            9912 79 +     84689 I
e Galagoides_demidoff.k141_1769638                           9597 79 +     27357 I
e Galago_senegalensis.k141_964197                           12529 70 -     43889 I
e Galago_moholi.ctg555                                     210150 70 -    847004 I
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I
e Arctocebus_calabarensis.k141_587554                         266 79 +      9265 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               11219 3 +    209709 TAA
s Acinonyx_jubatus.LLWD01000356.1                         2033204 3 +   3721120 TGA
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    111872 3 -    189883 TAA
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10656508 3 +  23371972 cga
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7093647 3 -  16596857 Tgc
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   15980 3 -     22067 TAA
i Allactaga_bullata.AllBul_scaffold_70162               I 3733 C 0
s Allenopithecus_nigroviridis.k141_2469532                    570 3 -     60446 CAA
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         1291 3 -     29318 CAA
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                          228 3 +     38766 CAA
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          1185 3 -     80423 CAA
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             9484 3 -     18050 TAA
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                 10574 3 -     11521 TAA
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                             10161 3 -     21359 TAA
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_298055                                 1455 3 +      1823 TAA
i Alouatta_juara.k141_298055                            C 0 C 0
s Alouatta_macconnelli.k141_1331706                          9457 3 -     10438 TAA
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            6113 3 +      7047 TAA
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             9393 3 +     10410 TAA
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            3201 3 -      4927 TAA
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             6130 3 +      6429 TAA
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3519345 3 +   4113121 TAA
i Ammotragus_lervia.NIVO01013474.1                      C 0 I 10
s Anoura_caudifer.AnoCau_scaffold_422                      389523 3 -    631301 TAA
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 I 4
s Antilocapra_americana.AntAmePen_scaffold_42841            29927 3 +     33004 TAA
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 I 10
s Aotus_azarae.k141_3170768                                 61843 3 +     78111 TAA
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            4784 3 +     22701 TAA
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5748741 3 +   9889416 TAA
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             5328 3 -    104377 TAA
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               5330 3 +     23246 TAA
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     2972 3 +      5067 TAA
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 7924 3 -     29036 CAA
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 I 4
s Ateles_geoffroyi_b.tarseq_2582                             9538589 3 +  39197703 TAA
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             59860 3 +     85812 TAA
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                10872 3 +     89302 TAA
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             15377 3 -     58268 TAA
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             63368 3 +    119057 TAA
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               5337 3 -     25888 TAA
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 5976 3 -     16375 TAA
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              2296 3 +      2719 TAA
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26379362 3 +  51448160 TAA
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        4593 3 -     13118 TAA
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   42408 3 -     72089 TAA
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 I 10
s Bison_bison.KN264915.1                                  6559082 3 +   6870073 TAA
i Bison_bison.KN264915.1                                C 0 I 10
s Bos_indicus.CM003021.1                                138139186 3 - 161108492 TAA
i Bos_indicus.CM003021.1                                C 0 I 10
s Bos_mutus.JH883513.1                                     571648 3 -    998990 TAA
i Bos_mutus.JH883513.1                                  C 0 I 10
s Bos_taurus.CM000177.6                                 136294919 3 - 158972876 TAA
i Bos_taurus.CM000177.6                                 C 0 I 10
s Bubalus_bubalis.KI419065.1                              1230686 3 -   1914593 TAA
i Bubalus_bubalis.KI419065.1                            C 0 I 10
s Cacajao_ayresi.k141_724503                               113230 3 -    171031 TAA
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 12258 3 +    125063 TAA
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                14303 3 -    216513 TAA
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        6843 3 -    134917 TAA
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3218779 3 -   8989139 TAA
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           396483 3 -  15254737 TAA
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2972216 3 +   6889770 TAA
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11518667 3 +  39901454 TGA
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   13692 3 +     87036 TGA
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11265334 3 -  35597290 tga
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11087868 3 +  39895921 tga
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16454883 3 -  44759192 tga
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21324421 3 + 157394656 TAA
i Capra_aegagrus.CM003214.1                             C 0 I 10
s Capra_hircus.CM004562.1                               135705648 3 - 157403528 TAA
i Capra_hircus.CM004562.1                               C 0 I 10
s Capromys_pilorides.CapPil_scaffold_979108                  1220 3 -      1248 TAA
i Capromys_pilorides.CapPil_scaffold_979108             C 0 N 0
s Carlito_syrichta.NW_007248099.1                          308266 3 +    345090 TCA
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               58722 3 +     67245 TAA
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 I 4
s Castor_canadensis.CasCan_scaffold_47037                   29963 3 +     33760 TAA
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   157976 3 -    276539 TAA
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 I 6
s Cavia_aperea.AVPZ01000278.1                            15785847 3 -  24422027 TAA
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15797781 3 -  24440124 TAA
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       175972 3 +    436027 TAA
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18890073 3 -  29618158 TAA
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 7617 3 -     26817 TAA
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                11857 3 +     25043 TAA
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         7299 3 +     21754 TCA
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4363084 3 +   7569818 TAA
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         2836 3 -      9338 TAA
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6554513 3 +   6739814 TAA
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      25990 3 +     60454 TAA
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          1195 3 -     21101 TAA
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         58505 3 -    107033 TAA
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        1397 3 -     17608 CAA
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          28892 3 +     30494 CAA
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          57738 3 -     59240 CAA
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          1439 3 +     16677 CAA
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           23597 3 +     35983 CAA
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11990125 3 +  12117833 CAA
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46476883 3 +  46592721 CAA
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      40434 3 -     45581 CAA
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       1440 3 +     35577 CAA
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        1216 3 -     25661 CAA
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        1194 3 -     17744 CAA
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        20810 3 +     37128 CAA
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           2043 3 -      6963 TAA
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           58273 3 -     68416 TAA
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            7316 3 +     13308 TAA
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             4873 3 -     18223 TAA
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             21896 3 +     25473 TAA
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           40931 3 +     57117 TAA
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          45610 3 +     54541 TAA
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chiropotes_israelita.k141_1189915                         70432 3 +    196370 TAA
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          14612 3 +     40510 TAA
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15138356 3 -  15256731 CAA
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      33403 3 -     53260 CAA
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101143967 3 + 101219884 CAA
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                15723 3 -     21363 TAA
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           761030 3 +    964067 TAA
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10885733 3 +  10971483 TAA
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147663897 3 + 156195979 TAA
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            15882 3 +     23629 TAA
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60612705 3 +  78930452 Tca
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         38897 3 -     40477 TAA
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 277781 3 -    399297 TAA
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53028456 3 +  72327488 TAA
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            51215 3 -     70449 TGA
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  207408 3 -    956709 TAA
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 29996 3 -     67205 TAA
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                17004 3 +     26546 TTT
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             58093 1 -    236241 --A
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          182880 3 -   6883506 TAA
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16844132 3 +  31942871 TAA
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80036040 3 -  96802777 TGA
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18698031 3 -  18957592 TAA
i Desmodus_rotundus.KZ672188.1                          C 0 I 2
s Dicerorhinus_sumatrensis.PEKH010003161.1                 321733 3 +    993696 taa
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   2383 3 +    151128 TAA
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dipodomys_ordii.KN672545.1                              3655388 3 +   4240102 caa
i Dipodomys_ordii.KN672545.1                            I 11 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 27021 3 +     28912 TAA
i Dipodomys_stephensi.DipSte_scaffold_44365             I 11 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                35344 3 -     73477 TAA
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Eidolon_helvum.KE772537.1                                 11381 3 +     24177 taa
i Eidolon_helvum.KE772537.1                             C 0 I 22
s Elaphurus_davidianus.JRFZ01086400.1                     1490696 3 +   1727528 TAA
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 I 10
s Ellobius_lutescens.LOEQ01003611.1                        239015 3 -    369425 TAA
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           6128 3 -      7838 TAA
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85871381 3 +  99434291 tga
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4703412 3 +   6522550 TAA
i Eptesicus_fuscus.JH977687.1                           C 0 I 4
s Equus_asinus.JREZ01000062.1                             5852136 3 -   7175178 TAA
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13350639 3 +  41866177 TAA
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          12129 3 +     92910 TAA
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erythrocebus_patas.Contig8                             48770534 3 -  48907691 CAA
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          314246 3 +    330699 TAA
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             60700 3 +     89355 TAA
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              4318 3 +     13586 TAA
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               4255 3 -      6809 TAA
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            10728 3 +     36558 TAA
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             7047 3 +     60246 TAA
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                10526 3 +    109717 TAA
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               14909 3 +     16540 TAA
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                15182 3 +     27497 TAA
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           17639 3 +     26808 TAA
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                32374 3 +     46535 TAA
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              15096 3 -     29447 TAA
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129892180 3 - 159252932 TGA
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129279249 3 - 158578461 TGA
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 20394 3 +     52776 TGA
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               155535 3 +    324696 TAA
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    180495 3 -    189561 taa
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           12367 3 -     18683 TAA
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               4599 3 -     14630 TAA
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119651698 3 - 195582420 TAA
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   76857 3 +    118900 TAA
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         1112 3 +     10286 TAA
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_1254239                            9288 3 +      9690 TAA
i Hapalemur_gilberti.k141_1254239                       C 0 C 0
s Hapalemur_griseus.k141_1387522                             4918 3 +     56096 TAA
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        28168 3 -     42470 TAA
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        44791 3 -     54384 TAA
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              16421 3 +     53719 TGA
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                26693 3 -     91191 TAA
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 I 10
s Heterocephalus_glaber.JH602058.1                        2550328 3 +  31725842 TAA
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               56748 3 +     73687 TAA
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 I 1
s Hippopotamus_amphibius.HipAmp_scaffold_1308              146322 3 +    277961 TAG
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      277612 3 -    477199 TCA
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              6764 3 -      9143 TCA
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      4005 3 -   7690867 TAA
i Hoolock_leuconedys.ctg79                                 C 0 I 161
s Hyaena_hyaena.HyaHya_flattened_line_20729                 16506 3 -     67322 TTA
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           18223 3 -    119109 TAA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              4431 3 +      5897 TAA
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_624065                               1295 3 +      2112 TAA
i Hylobates_agilis.k141_624065                          C 0 C 0
s Hylobates_klossii.k141_466549                             10871 3 +     11537 TAA
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14623976 3 -  25970782 TAA
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            1232 3 -      2977 TAA
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     5391 3 +     22540 TAA
i Hystrix_cristata.HysCri_scaffold_50788                I 4 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7125118 3 +  13083262 TAA
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_4418183                                    738 3 -      1457 TAA
i Indri_indri.k141_4418183                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               8240 3 +     17520 TAA
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8564999 3 +  11848649 TAA
i Jaculus_jaculus.JH725517.1                            I 17 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               22860 3 +     37189 TAA
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          49453 3 -    147782 TAA
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   113509 3 -    115756 TAA
i Lasiurus_borealis.LasBor_scaffold_5102                I 13 I 4
s Lemur_catta.scaffold_1                                258406472 3 - 285822530 TAA
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        23228 3 +     39228 TAA
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            52603 3 +     63517 TAA
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        77853 3 +    116806 TAA
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     30867 3 -     33031 TAA
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3085182 3 -   3498232 tga
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    12219 3 +     22452 TTT
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            135193 3 +   3060487 TAA
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19247602 3 +  19376315 TAA
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loxodonta_africana.GL010040.1                          20591319 3 -  62548349 tga
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11087324 3 +  39895028 tga
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             19342 3 +     74745 TGA
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12705798 3 +  12821369 TGA
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                1443 3 -      3136 TGA
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           46260 3 +     63263 TGA
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                  963 3 -      2568 TGA
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 1549 3 -      7381 TGA
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  44767 3 -     79256 TGA
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196034875 3 + 196197964 TGA
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11445043 3 +  11645122 TGA
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   3714 3 -     46448 TGA
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                1386 3 -     13212 TGA
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 15067 3 -     55006 TGA
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43840184 3 +  43892939 TGA
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               16353 3 -     24607 TGA
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               3719 3 -     27140 TGA
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                700809 3 +    802869 TAA
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43436761 3 -  43563597 TAA
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4449587 3 -   4543643 TAA
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36872956 3 +  64221397 TAA
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       63618 3 -    234502 TAA
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433              195 3 -     87323 TGA
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               11964 3 +     15977 TAA
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1046165 3 -  26018355 TAA
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Microcebus_murinus.CM007691.1                          16509482 3 +  47401472 TAA
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               21906 3 -     32043 TGA
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 I 4
s Microtus_ochrogaster.CM001673.1                        22819308 3 -  98408828 TAA
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8208902 3 +  10048721 TAA
i Miniopterus_natalensis.LDJU01000022.1                 C 0 I 4
s Miniopterus_schreibersii.MinSch_scaffold_24116            33554 3 +     45743 TAA
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 I 4
s Miopithecus_ogouensis.k141_2935907                         1314 3 +     29742 CAA
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        10695 3 -    104932 TGA
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     4872 3 +      8497 TAA
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 145628 3 +    154973 TAA
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                160417 3 +    265003 TAA
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 I 4
s Moschus_moschiferus.MosMos_scaffold_146101                 3796 3 -      4346 TAA
i Moschus_moschiferus.MosMos_scaffold_146101            C 0 I 10
s Mungos_mungo.MunMun_flattened_line_8729                  144117 3 -    168139 TGA
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          18773 3 -    100666 TAA
i Murina_feae.MurFea_scaffold_2254                      C 0 I 4
s Mus_caroli.LT608236.1                                  70765821 3 +  92629107 TAA
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75488885 3 +  98207768 TAA
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67555106 3 +  89017189 taa
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74330061 3 +  97876770 TAA
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             10882 3 +     98495 TAA
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4423560 3 -  28371801 tga
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     89279 3 -    117718 TAA
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               967068 3 +   8389877 TAA
i Myotis_brandtii.KE161952.1                            C 0 I 4
s Myotis_davidii.KB114863.1                               5018744 3 +   6462685 TAA
i Myotis_davidii.KB114863.1                             C 0 I 4
s Myotis_lucifugus.GL429887.1                             3464648 3 -   3747815 TAA
i Myotis_lucifugus.GL429887.1                           C 0 I 4
s Myotis_myotis.MyoMyo_scaffold_6123                         9863 3 +     66751 TAA
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 I 4
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             4280 3 -      8794 TAA
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            117669 3 +    362372 AAA
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               7816 3 +     48152 TAA
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4484087 3 -  14209539 tga
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3950243 3 -   4490290 TAA
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  48519 3 +     94413 TAA
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 I 4
s Nomascus_annamensis.k141_302224                            1273 3 +      1516 TAA
i Nomascus_annamensis.k141_302224                       C 0 C 0
s Nomascus_concolor.k141_226614                               533 3 -      5092 TAA
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_642452                            1316 3 +      2851 TAA
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             24251 3 -  18771707 TAA
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  1954 3 +      4512 TAA
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                30129 3 +   3668941 tga
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Ochotona_princeps.JH802095.1                            4995305 3 -  23139505 TAA
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3684820 3 +  10294119 gaa
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             678750 3 -   3126709 tga
i Odobenus_rosmarus.KB229369.1                          C 0 I 164
s Odocoileus_virginianus.KZ101650.1                       1078927 3 +   1425656 TAA
i Odocoileus_virginianus.KZ101650.1                     C 0 I 10
s Okapia_johnstoni.LVCL01S0017931.1                         36221 3 +     78940 TAA
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 I 10
s Ondatra_zibethicus.OndZib_scaffold_6821                  124565 3 +    145789 CAA
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  36366 3 +     62360 TAA
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7223925 3 -   7562323 TAA
i Orcinus_orca.KB316965.1                               C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141875239 3 + 163896628 taa
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      307410 3 -    505867 tga
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Ovis_aries.CM001582.2                                 134076487 3 - 275406953 TAA
i Ovis_aries.CM001582.2                                 C 0 I 10
s Ovis_canadensis.OviCan_scaffold_6251                      77701 3 +    140051 TAA
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 I 10
s Pan_paniscus.CM003386.1                               127573959 3 - 205426864 TAA
i Pan_paniscus.CM003386.1                               I 24 I 161
s Pan_troglodytes.CM009241.2                            120151112 3 - 196562556 TAA
i Pan_troglodytes.CM009241.2                            I 24 I 161
s Panthera_onca.PanOnc_flattened_line_1615                  33562 3 +    295523 TGA
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3637298 3 +  18214204 TGA
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5026957 3 -   6340057 TGA
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1065348 3 -   1292953 TAA
i Pantholops_hodgsonii.KE114631.1                       C 0 I 10
s Papio_anubis.CM001492.2                               188155552 3 - 188283584 TGA
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             3869 3 +      5367 TAA
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47512940 3 +  47705337 TAA
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 66918 3 -    104429 TAA
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    5450 3 +     14967 TAA
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 1311 3 -      7628 TAA
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    114990 3 -    135482 TGA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      42863 2 -     45160 TA-
i Perognathus_longimembris.PerPac_flattened_line_22291  I 11 C 0
s Peromyscus_maniculatus.KI615518.1                       4949598 3 -   8017169 TAA
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    11755 3 -     36578 TGA
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            120542 3 -    122454 TAA
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1987485                           1338 3 -      5908 TAA
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       1958 3 -     17985 TAA
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            1325 3 +      7694 TAA
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26739803 3 +  26888534 TAA
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            96717 3 +    112873 TAA
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 I 4
s Pithecia_albicans.k141_991845                             42935 3 -     61926 TAA
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        24366 3 +     78826 TAA
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              8315 3 -     15800 TAA
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        11513 3 -     16101 TAA
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          4822 3 +      9673 TAA
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13473818 3 -  19735023 TAA
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           12724 3 -     31692 TAA
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           4612 3 +     21690 TAA
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       22157 3 +     44506 TAA
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        22369 3 +     67491 TAA
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      12608 3 -     98129 TAA
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     22208 3 +    147771 TAA
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        22463 3 -     23762 TAA
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          2929 3 -     55515 TAA
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         22282 3 +    152463 TAA
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                          0 2 -    119457 -AA
i Plecturocebus_hoffmannsi.k141_985533                  N 0 C 0
s Plecturocebus_miltoni.k141_841561                         12004 3 +    134592 TAA
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          22592 3 -     75465 TAA
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              186484 3 -    373494 TAA
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19807132 3 +  19899266 TAA
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               5060 3 -     15069 TAA
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              5194 3 +     14865 TAA
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                76612 3 +     78963 TAA
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 I 1
s Prolemur_simus.MPIZ01000048.1                           6847853 3 +  12164890 TAA
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    667078 3 -   2312742 TAA
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         2905 3 +     11805 TAA
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           42242 3 +     52369 TAA
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         34630 3 -     44753 TAA
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            16552 3 +     27322 TAA
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       16187 3 -     53241 CAA
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         38459 3 -     48185 TAA
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           33518 3 +     77221 taa
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            3075 3 -     27784 TAA
i Pteronotus_parnellii.KE867983.1                       C 0 I 4
s Pteronura_brasiliensis.PteBra_flattened_line_1343        245869 3 -    344369 TGA
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13245195 3 -  17261082 taa
i Pteropus_alecto.KB031157.1                            C 0 I 2
s Pteropus_vampyrus.KN525959.1                             603146 3 -   3946241 TAA
i Pteropus_vampyrus.KN525959.1                          C 0 I 3
s Puma_concolor.QAVW01000427.1                          131533542 3 - 161321710 TGA
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             29178 3 +     56732 TAA
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6805669 3 +   6970761 TAA
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             5063 3 +     18040 TAA
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                15004 3 +     68503 TAA
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 I 10
s Rattus_norvegicus.chr11                                13914775 3 +  90463843 TAA
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1787020 3 +   2252614 TAA
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_1391695                           1291 3 -      1866 TAA
i Rhinopithecus_bieti.k119_1391695                      C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206376948 3 - 206558726 TAA
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44855848 3 -  45163003 TAA
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                18473 3 +    109198 TAA
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 I 37
s Saiga_tatarica.SaiTat_scaffold_82192                       7167 3 +     12214 TAA
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 I 10
s Saimiri_boliviensis.NW_024100938.1                     15672023 3 -  43202129 TAA
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        3940 3 +     34089 TAA
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              3881 3 -     60842 TAA
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              3976 3 +     67014 TAA
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              3954 3 +     60816 TAA
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 3891 3 -     76454 TAA
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17340616 3 -  30362882 TAA
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         19975 3 -     62485 TAA
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   31510 3 -    114521 TCA
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        2675 3 +     15331 TAA
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       8072 3 +     20762 TAA
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         118074 3 +    130994 TAA
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           36861 3 +     46263 TAA
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     29975 3 +     42640 TAA
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        13019 3 +     30600 TAA
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   99563 3 -    120886 TAA
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            18080 3 +    739146 TAA
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2239038 2 +   2842873 TA-
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             233990 3 -    276980 TGA
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            26781 3 +     62062 TGA
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189271065 3 + 218635234 taa
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        14233 3 -  13920577 TAA
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               5245 3 -      6213 TAA
i Tadarida_brasiliensis.TadBra_scaffold_145589          I 27 I 4
s Tamandua_tetradactyla.TamTet_scaffold_26877               13956 3 +     45698 TAA
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      806104 3 +   1148477 TAA
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  56795 3 +     99546 TAA
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               25751 3 +     42269 TCA
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               59067 3 +     65473 TCA
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194007079 3 - 194193292 TAA
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             38571 3 -     47444 TGA
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  4795 2 +      6782 -AA
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  135091 3 -    259118 TAA
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 I 2
s Trachypithecus_auratus.k141_738098                        26182 3 +     38948 TAA
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   19909 3 -     32910 TAA
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      1296 3 -     12939 TAA
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       1231 3 -     14244 TAA
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           42629 3 -     54611 TAA
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                         435 3 -     11566 TAA
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     2607 3 -     15592 TAA
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          1264 3 +     14371 TAA
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  51016 3 +     51589 TAA
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       14197 3 +     14732 TAA
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       4669 3 -     28054 TAA
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44659469 3 -  44834318 TAA
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       1772 3 +     13828 TAA
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   4380 3 +     90398 TAC
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16081771 3 +  31416278 taa
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2792149 3 -   3938065 CGC
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    4352 3 +     13056 TGC
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69312642 3 -  96451834 TAA
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                    520 3 +     10241 TCA
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6513998 3 +  28682327 cga
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  4563 3 -     20643 TAA
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             24104 3 -     33872 TAA
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1523886 3 -   2331223 TAA
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                137507 3 -    281493 TGA
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       126146 3 -    134049 TAA
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        213476 3 -    227762 TGA
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 I 164
s Ziphius_cavirostris.ZipCav_flattened_line_127025           6137 3 -      8775 TAA
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Sorex_araneus.JH798170.1                               17750754 3364 -  27805282 I
e Dinomys_branickii.DinBra_scaffold_1996                   156356 54 +    228994 I
e Erinaceus_europaeus.JH835290.1                         11531598 1064 +  16010500 I
e Orycteropus_afer.OryAfe_flattened_line_13509              43378 16 -     66828 I
e Microgale_talazaci.MicTal_scaffold_34660                  30638 409 -     48017 I
e Manis_pentadactyla.KN017078.1                             35015 87 +     58827 I
e Manis_javanica.JSZB01003966.1                            144940 87 +    252755 I
e Elephantulus_edwardii.JH947210.1                        7804622 10712 +  15467074 I
e Echinops_telfairi.JH980316.1                           22994192 422 -  44670279 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     14107 296 -     20485 I
e Hylobates_pileatus_a.tarseq_592                             33341 34 -     60944 I
e Perodicticus_potto.k141_713187                            23970 79 -     27972 I
e Perodicticus_ibeanus.k141_117958                           4661 79 -     23713 I
e Otolemur_garnettii.GL873528.1                          18007674 78 -  38779656 I
e Otolemur_crassicaudatus.k141_321880                       38246 79 +     38679 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65668684 79 +  89412551 I
e Nycticebus_coucang.k141_2051882                            3075 79 +      6470 I
e Nycticebus_bengalensis.LG16                            65566346 79 -  95554990 I
e Loris_tardigradus.ctg97                                 3777661 79 +   6799190 I
e Loris_lydekkerianus.k141_550999                            9912 79 +     84689 I
e Galagoides_demidoff.k141_1769638                           9597 79 +     27357 I
e Galago_senegalensis.k141_964197                           12529 70 -     43889 I
e Galago_moholi.ctg555                                     210150 70 -    847004 I
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I
e Chinchilla_lanigera.JH721867.1                         15960993 0 +  43084221 C
e Arctocebus_calabarensis.k141_587554                         266 79 +      9265 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               11222 26 +    209709 AG-ATTA--ATA--ACCATT-TT------------------------------C-AT--TTT--TGT
s Acinonyx_jubatus.LLWD01000356.1                         2033207 26 +   3721120 AA-ATCA--AAA--AACGTT-TT------------------------------C-AA--CTT--tgt
i Acinonyx_jubatus.LLWD01000356.1                       C 0 I 130
s Acomys_cahirinus.AcoCah_scaffold_1625                    111875 26 -    189883 AG-GGTA--ATA--ATTATT-TT------------------------------C-AG--TTT--TGT
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 I 137
s Ailuropoda_melanoleuca.LNAT01000321.1                  10656511 26 +  23371972 aa-atta--ata--aacatt-ta------------------------------c-aa--ttt--tgt
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 I 131
s Ailurus_fulgens.LNAC01000003.1                          7093650 26 -  16596857 aa-atta--ata--aacatt-tt------------------------------a-aa--ttt--tgt
i Ailurus_fulgens.LNAC01000003.1                        C 0 I 336
s Allactaga_bullata.AllBul_scaffold_70162                   15983 26 -     22067 AG-AGTA--ATA--ATCAAT-TT------------------------------T-AG--TTT--TGT
i Allactaga_bullata.AllBul_scaffold_70162               C 0 I 119
s Allenopithecus_nigroviridis.k141_2469532                    573 26 -     60446 AG-AGTA--AAA--ACCATT-TT------------------------------c-ag--ttt--tgt
i Allenopithecus_nigroviridis.k141_2469532              C 0 I 135
s Allochrocebus_lhoesti.k141_3566948                         1294 26 -     29318 AG-AGTA--ATA--ACCATT-TT------------------------------c-ag--ttt--tgt
i Allochrocebus_lhoesti.k141_3566948                    C 0 I 135
s Allochrocebus_preussi.k141_1108977                          231 26 +     38766 AG-AGTA--ATA--ACCATT-TT------------------------------c-ag--ttt--tgt
i Allochrocebus_preussi.k141_1108977                    C 0 I 135
s Allochrocebus_solatus.k141_371672                          1188 26 -     80423 AG-AGTA--ATA--ACCATT-TT------------------------------c-ag--ttt--tgt
i Allochrocebus_solatus.k141_371672                     C 0 I 135
s Alouatta_belzebul.k141_1818029                             9487 25 -     18050 AG-ATTA--ATA--ACCATT-T-------------------------------C-AG--TTT--TGT
i Alouatta_belzebul.k141_1818029                        C 0 I 133
s Alouatta_caraya.k141_5460                                 10577 25 -     11521 AG-ATTA--ATA--ACCATT-T-------------------------------C-AG--TTT--TGT
i Alouatta_caraya.k141_5460                             C 0 I 136
s Alouatta_discolor.k141_811576                             10164 25 -     21359 AG-ATTA--ATA--ACCATT-T-------------------------------C-AG--TTT--TGT
i Alouatta_discolor.k141_811576                         C 0 I 133
s Alouatta_juara.k141_298055                                 1458 25 +      1823 AG-ATTA--ATA--ACCATT-T-------------------------------C-AG--TTT--TGT
i Alouatta_juara.k141_298055                            C 0 I 136
s Alouatta_macconnelli.k141_1331706                          9460 25 -     10438 AG-ATTA--ATA--ACCATT-T-------------------------------C-AG--TTT--TGT
i Alouatta_macconnelli.k141_1331706                     C 0 I 136
s Alouatta_nigerrima.k141_2718643                            6116 25 +      7047 AG-ATTA--ATA--ACCATT-T-------------------------------C-AG--TTT--TGT
i Alouatta_nigerrima.k141_2718643                       C 0 I 136
s Alouatta_palliata.k141_1316127                             9396 25 +     10410 AG-ATTA--ATA--ACCATT-T-------------------------------C-AG--TTT--TGT
i Alouatta_palliata.k141_1316127                        C 0 I 136
s Alouatta_puruensis.k141_1284840                            3204 25 -      4927 AG-ATTA--ATA--ACCATT-T-------------------------------C-AG--TTT--TGT
i Alouatta_puruensis.k141_1284840                       C 0 I 136
s Alouatta_seniculus.k141_990213                             6133 25 +      6429 AG-ATTA--ATA--ACCATT-T-------------------------------C-AG--TTT--TGT
i Alouatta_seniculus.k141_990213                        C 0 I 136
s Ammotragus_lervia.NIVO01013474.1                        3519358  9 +   4113121 -----------------------------------------------------C-GG--TTT--TGT
i Ammotragus_lervia.NIVO01013474.1                      I 10 I 134
s Anoura_caudifer.AnoCau_scaffold_422                      389530 26 -    631301 TA-ACTA--ATA--ATCATT-AT------------------------------C-AG--TTT--TCT
i Anoura_caudifer.AnoCau_scaffold_422                   I 4 I 135
s Antilocapra_americana.AntAmePen_scaffold_42841            29940  9 +     33004 -----------------------------------------------------C-GG--TTT--TGT
i Antilocapra_americana.AntAmePen_scaffold_42841        I 10 I 134
s Aotus_azarae.k141_3170768                                 61846 25 +     78111 AG-ATTA--ATA--ACCATT-T-------------------------------C-AG--TTT--TGT
i Aotus_azarae.k141_3170768                             C 0 I 136
s Aotus_griseimembra.k141_3275623                            4787 25 +     22701 AG-ATTA--ATA--ACCATT-T-------------------------------C-AG--TTT--TGT
i Aotus_griseimembra.k141_3275623                       C 0 I 136
s Aotus_nancymaae.KZ196176.1                              5748744 25 +   9889416 AG-ATTA--ATA--ACCATT-T-------------------------------C-AG--TTT--TGT
i Aotus_nancymaae.KZ196176.1                            C 0 I 136
s Aotus_trivirgatus.k141_1740727                             5331 25 -    104377 AG-ATTA--ATA--ACCATT-T-------------------------------C-AG--TTT--TGT
i Aotus_trivirgatus.k141_1740727                        C 0 I 136
s Aotus_vociferans.k141_718647                               5333 25 +     23246 AG-ATTA--ATA--ACCATT-T-------------------------------C-AG--TTT--TGT
i Aotus_vociferans.k141_718647                          C 0 I 136
s Aplodontia_rufa.AprRuf_scaffold_156013                     2975 26 +      5067 AG-ATTA--ACA--ACCATT-TT------------------------------C-AG--TTT--TGT
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 I 113
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 7931 26 -     29036 TA-ATTA--ATA--ATCATC-AG------------------------------C-AG--CAT--TCT
i Artibeus_jamaicensis.ArtJam_scaffold_41619            I 4 I 135
s Ateles_geoffroyi_b.tarseq_2582                             9538592 25 +  39197703 AG-ATTA--ATA--ACCATT-T-------------------------------C-AG--TAT--TGT
i Ateles_geoffroyi_b.tarseq_2582                           C 0 I 136
s Ateles_belzebuth.k141_1348307                             59863 25 +     85812 AG-ATTA--ATA--ACCATT-T-------------------------------C-AG--TAT--TGT
i Ateles_belzebuth.k141_1348307                         C 0 I 136
s Ateles_chamek.k141_1072810                                10875 25 +     89302 AG-ATTA--ATA--ACCATT-T-------------------------------C-AG--TAT--TGT
i Ateles_chamek.k141_1072810                            C 0 I 136
s Ateles_geoffroyi_a.k141_1300742                             15380 25 -     58268 AG-ATTA--ATA--ACCATT-T-------------------------------C-AG--TAT--TGT
i Ateles_geoffroyi_a.k141_1300742                         C 0 I 136
s Ateles_marginatus.k141_899112                             63371 25 +    119057 AG-ATTA--ATA--ACCATT-T-------------------------------C-AG--TAT--TGT
i Ateles_marginatus.k141_899112                         C 0 I 136
s Ateles_paniscus.k141_1631200                               5340 25 -     25888 AG-ATTA--ATA--ACCATA-T-------------------------------C-AG--TAT--TGT
i Ateles_paniscus.k141_1631200                          C 0 I 136
s Avahi_laniger.k141_2840928                                 5979 26 -     16375 AG-ATTA--ATA--ACCATT-TT------------------------------C-AG--TCT--TGT
i Avahi_laniger.k141_2840928                            C 0 I 135
s Avahi_peyrierasi.k141_2689020                              2299 26 +      2719 AG-ATTA--ATA--ACCATT-TT------------------------------C-AG--TCT--TGT
i Avahi_peyrierasi.k141_2689020                         C 0 I 135
s Balaenoptera_acutorostrata.KI537095.1                  26379365 26 +  51448160 AA-GTTA--ATA--ACTGTT-TT------------------------------C-TG--CTt--tgt
i Balaenoptera_acutorostrata.KI537095.1                 C 0 I 135
s Balaenoptera_bonaerensis.DF502048.1                        4596 26 -     13118 AA-GTTA--ATA--ACTGTT-TT------------------------------C-TG--CTt--tgt
i Balaenoptera_bonaerensis.DF502048.1                   C 0 I 135
s Beatragus_hunteri.BeaHun_scaffold_21644                   42421  9 -     72089 -----------------------------------------------------C-GG--TTT--TGT
i Beatragus_hunteri.BeaHun_scaffold_21644               I 10 I 134
s Bison_bison.KN264915.1                                  6559095  9 +   6870073 -----------------------------------------------------C-GG--TTT--TGT
i Bison_bison.KN264915.1                                I 10 I 134
s Bos_indicus.CM003021.1                                138139199  9 - 161108492 -----------------------------------------------------C-GG--TTT--TGT
i Bos_indicus.CM003021.1                                I 10 I 134
s Bos_mutus.JH883513.1                                     571661  9 -    998990 -----------------------------------------------------C-GG--TTT--TGT
i Bos_mutus.JH883513.1                                  I 10 I 209
s Bos_taurus.CM000177.6                                 136294932  9 - 158972876 -----------------------------------------------------C-GG--TTT--TGT
i Bos_taurus.CM000177.6                                 I 10 I 134
s Bubalus_bubalis.KI419065.1                              1230699  9 -   1914593 -----------------------------------------------------C-GG--TTT--TGT
i Bubalus_bubalis.KI419065.1                            I 10 I 1450
s Cacajao_ayresi.k141_724503                               113233 25 -    171031 AG-ATTA--ATA--ACCATT-T-------------------------------C-AG--TTT--TGT
i Cacajao_ayresi.k141_724503                            C 0 I 133
s Cacajao_calvus.k141_96166                                 12261 25 +    125063 AG-ATTA--ATA--ACCATT-T-------------------------------C-AG--TTT--TGT
i Cacajao_calvus.k141_96166                             C 0 I 136
s Cacajao_hosomi.k141_303789                                14306 25 -    216513 AG-ATTA--ATA--ACCATT-T-------------------------------C-AG--TTT--TGT
i Cacajao_hosomi.k141_303789                            C 0 I 136
s Cacajao_melanocephalus.k141_1160263                        6846 25 -    134917 AG-ATTA--ATA--ACCATT-T-------------------------------C-AG--TTT--TGT
i Cacajao_melanocephalus.k141_1160263                   C 0 I 136
s Camelus_bactrianus.KN276303.1                           3218782 26 -   8989139 AA-CTTA--GTA--ACCATT-TT------------------------------T-AC--TTt--tgt
i Camelus_bactrianus.KN276303.1                         C 0 I 128
s Camelus_dromedarius.KN271192.1                           396486 26 -  15254737 AA-CTTA--GTA--ACCATT-TT------------------------------T-AC--TTt--tgt
i Camelus_dromedarius.KN271192.1                        C 0 I 128
s Camelus_ferus.KB016973.1                                2972219 26 +   6889770 AA-CTTA--GTA--ACCATT-TT------------------------------T-AC--TTt--tgt
i Camelus_ferus.KB016973.1                              C 0 I 128
s CanFam4.chr31                                          11518670 26 +  39901454 AA-ATTA--ATA--AACATT-TT------------------------------C-AA--TTT--TTt
i CanFam4.chr31                                         C 0 I 130
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   13695 26 +     87036 AA-ATTA--ATA--AACATT-TT------------------------------C-AA--TTT--TTt
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 I 130
s Canis_lupus_dingo.QKWQ01001993.1                       11265337 26 -  35597290 aa-atta--ata--aacatt-tt------------------------------c-aa--ttt--ttt
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 I 130
s Canis_lupus_familiaris.chr31                           11087871 26 +  39895921 aa-atta--ata--aacatt-tt------------------------------c-aa--ttt--ttt
i Canis_lupus_familiaris.chr31                          C 0 I 130
s Canis_lupus_orion.HG994411.1                           16454886 26 -  44759192 aa-atta--ata--aacatt-tt------------------------------c-aa--ttt--ttt
i Canis_lupus_orion.HG994411.1                          C 0 I 130
s Capra_aegagrus.CM003214.1                              21324434  9 + 157394656 -----------------------------------------------------C-GG--TTT--TGT
i Capra_aegagrus.CM003214.1                             I 10 I 134
s Capra_hircus.CM004562.1                               135705661  9 - 157403528 -----------------------------------------------------C-GG--TTT--TGT
i Capra_hircus.CM004562.1                               I 10 I 134
s Capromys_pilorides.CapPil_scaffold_2446099                  192 26 +       369 GG-ATTA--GTA--GCCACT-TT------------------------------C-TG--TTT--TGT
i Capromys_pilorides.CapPil_scaffold_2446099            N 0 I 130
s Carlito_syrichta.NW_007248099.1                          308269 26 +    345090 AG-ATGA--GTA--ATCATT-TT------------------------------G-AG--TTT--CAT
i Carlito_syrichta.NW_007248099.1                       C 0 I 135
s Carollia_perspicillata.CarPer_scaffold_4436               58729 26 +     67245 TA-ATTA--ATA--ATCATT-AT------------------------------c-ag--tgt--tct
i Carollia_perspicillata.CarPer_scaffold_4436           I 4 I 135
s Castor_canadensis.CasCan_scaffold_47037                   29966 17 +     33760 AG-ATTT--AAC--ACCATT-TT--------------------------------------------
i Castor_canadensis.CasCan_scaffold_47037               C 0 I 136
s Catagonus_wagneri.CatWag_scaffold_1305                   157985  8 -    276539 --------------ACCACT-TT--------------------------------------------
i Catagonus_wagneri.CatWag_scaffold_1305                I 6 I 249
s Cavia_aperea.AVPZ01000278.1                            15785850 26 -  24422027 GG-ATTA--GTA--ATCACT-TT------------------------------C-GG--TTT--TGT
i Cavia_aperea.AVPZ01000278.1                           C 0 I 135
s Cavia_porcellus.DS562889.1                             15797784 26 -  24440124 GG-ATTA--GTA--ATCACT-TT------------------------------C-GG--TTT--TGT
i Cavia_porcellus.DS562889.1                            C 0 I 135
s Cavia_tschudii.CavTsc_scaffold_488                       175975 26 +    436027 GG-ATTA--GTA--ATCACT-TT------------------------------C-GG--TTT--TGT
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 I 135
s Cebus_albifrons.Contig22                               18890076 25 -  29618158 AG-ATTA--ATA--ACCATT-T-------------------------------c-ag--ttt--tgt
i Cebus_albifrons.Contig22                              C 0 I 136
s Cebus_olivaceus.k141_93739                                 7620 25 -     26817 AG-ATTA--ATA--ACCATT-T-------------------------------C-AG--TTT--TGT
i Cebus_olivaceus.k141_93739                            C 0 I 136
s Cebus_unicolor.k141_239009                                11860 25 +     25043 AG-ATTA--ATA--ACCATT-T-------------------------------C-AG--TTT--TGT
i Cebus_unicolor.k141_239009                            C 0 I 136
s Cephalopachus_bancanus.k141_702587                         7302 26 +     21754 AG-ATGA--GTA--ATCATT-TT------------------------------G-AG--TTT--Cgt
i Cephalopachus_bancanus.k141_702587                    C 0 I 136
s Ceratotherium_simum.JH767818.1                          4363087 23 +   7569818 AA-ATT-----A--ACCAGT-TT------------------------------A-AG--TTT--TGT
i Ceratotherium_simum.JH767818.1                        C 0 I 134
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         2839 26 -      9338 AA-ATTA--ATA--ACCAGT-TT------------------------------A-AG--TTT--tgt
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 I 134
s Cercocebus_atys.KQ010443.1                              6554516 26 +   6739814 AG-AGTA--AAA--ACCATT-TT------------------------------C-AG--TTT--TGT
i Cercocebus_atys.KQ010443.1                            C 0 I 135
s Cercocebus_chrysogaster.k141_2328246                      25993 26 +     60454 AG-AGTA--AAA--ACCATT-TT------------------------------C-AG--TTT--TGT
i Cercocebus_chrysogaster.k141_2328246                  C 0 I 135
s Cercocebus_lunulatus.k141_4634644                          1198 26 -     21101 AG-AGTA--AAA--ACCATT-TT------------------------------C-AG--TTT--TGT
i Cercocebus_lunulatus.k141_4634644                     C 0 I 135
s Cercocebus_torquatus.k141_3969582                         58508 26 -    107033 AG-AGTA--AAA--ACCATT-TT------------------------------C-AG--TTT--TGT
i Cercocebus_torquatus.k141_3969582                     C 0 I 135
s Cercopithecus_ascanius.k141_4123525                        1400 26 -     17608 AG-AGTA--AAA--ACCATT-TT------------------------------c-ag--ttt--tgt
i Cercopithecus_ascanius.k141_4123525                   C 0 I 135
s Cercopithecus_cephus.k141_598190                          28895 26 +     30494 AG-AGTA--AAA--ACCATT-TT------------------------------c-ag--ttt--tgt
i Cercopithecus_cephus.k141_598190                      C 0 I 135
s Cercopithecus_diana.k141_2980617                          57741 26 -     59240 AG-AGTA--AAA--ACCATT-TT------------------------------c-ag--ttt--tgt
i Cercopithecus_diana.k141_2980617                      C 0 I 135
s Cercopithecus_hamlyni.k141_129805                          1442 26 +     16677 AG-AGTA--AAA--ACCATT-TT------------------------------c-ag--ttt--tgt
i Cercopithecus_hamlyni.k141_129805                     C 0 I 135
s Cercopithecus_lowei.k141_623764                           23600 26 +     35983 AG-AGTA--AAA--ACCATT-TT------------------------------c-ag--ttt--tgt
i Cercopithecus_lowei.k141_623764                       C 0 I 135
s Cercopithecus_albogularis.ctg51                              11990128 26 +  12117833 AG-AGTA--AAA--ACCATT-TT------------------------------c-ag--ttt--tgt
i Cercopithecus_albogularis.ctg51                             C 0 I 135
s Cercopithecus_mona.ctg12                               46476886 26 +  46592721 AG-AGTA--AAA--ACCATT-TT------------------------------c-ag--ttt--tgt
i Cercopithecus_mona.ctg12                              C 0 I 135
s Cercopithecus_neglectus.k141_2078027                      40437 26 -     45581 AG-AGTA--AAA--ACCATT-TT------------------------------c-ag--ttt--tgt
i Cercopithecus_neglectus.k141_2078027                  C 0 I 135
s Cercopithecus_nictitans.k141_1129315                       1443 26 +     35577 AG-AGTA--AAA--ACCATT-TT------------------------------c-ag--ttt--tgt
i Cercopithecus_nictitans.k141_1129315                  C 0 I 135
s Cercopithecus_petaurista.k141_64532                        1219 26 -     25661 AG-AGTA--AAA--ACCATT-TT------------------------------c-ag--ttt--tgt
i Cercopithecus_petaurista.k141_64532                   C 0 I 135
s Cercopithecus_pogonias.k141_3109732                        1197 26 -     17744 AG-AGTA--AAA--ACCATT-TT------------------------------c-ag--ttt--tgt
i Cercopithecus_pogonias.k141_3109732                   C 0 I 135
s Cercopithecus_roloway.k141_2263608                        20813 26 +     37128 AG-AGTA--AAA--ACCATT-TT------------------------------c-ag--ttt--tgt
i Cercopithecus_roloway.k141_2263608                    C 0 I 135
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           2046 23 -      6963 TG-CTTA--GTA--A---TT-TT------------------------------A-ag--tgt--tgt
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 I 119
s Cheirogaleus_major.k141_1157592                           58276 26 -     68416 AG-ATTA--ATA--ACCATT-TT------------------------------c-ag--ttt--tgt
i Cheirogaleus_major.k141_1157592                       C 0 I 134
s Cheirogaleus_medius.k141_133808                            7319 26 +     13308 AG-ATTA--ATA--ACCATT-TT------------------------------c-ag--ttt--tgt
i Cheirogaleus_medius.k141_133808                       C 0 I 134
s Cheracebus_lucifer.k141_619653                             4876 25 -     18223 AG-ATTA--ATA--ACCATT-T-------------------------------C-AG--TTT--TGT
i Cheracebus_lucifer.k141_619653                        C 0 I 136
s Cheracebus_lugens.k141_203936                             21899 25 +     25473 AG-ATTA--ATA--ACCATT-T-------------------------------C-AG--TTT--TGT
i Cheracebus_lugens.k141_203936                         C 0 I 136
s Cheracebus_regulus.k141_2128895                           40934 25 +     57117 AG-ATTA--ATA--ACCATT-T-------------------------------C-AG--TTT--TGT
i Cheracebus_regulus.k141_2128895                       C 0 I 136
s Cheracebus_torquatus.k141_315545                          45613 25 +     54541 AG-ATTA--ATA--ACCATT-T-------------------------------C-AG--TTT--TGT
i Cheracebus_torquatus.k141_315545                      C 0 I 136
s Chinchilla_lanigera.JH721867.1                         15960993 21 +  43084221 ------A--GTA--ACTACT-TT------------------------------c-ag--ttt--tgt
i Chinchilla_lanigera.JH721867.1                        C 0 I 140
s Chiropotes_israelita.k141_1189915                         70435 25 +    196370 AG-ATTA--ATA--ACCATT-T-------------------------------C-AG--TTT--TGT
i Chiropotes_israelita.k141_1189915                     C 0 I 136
s Chiropotes_sagulatus.k141_773804                          14615 25 +     40510 AG-ATTA--ATA--ACCATT-T-------------------------------C-AG--TTT--TGT
i Chiropotes_sagulatus.k141_773804                      C 0 I 136
s Chlorocebus_aethiops.ctg22                             15138359 26 -  15256731 AG-AGTA--ATA--ACCATT-TT------------------------------c-ag--ttt--tgt
i Chlorocebus_aethiops.ctg22                            C 0 I 135
s Chlorocebus_pygerythrus.k141_1486215                      33406 26 -     53260 AG-AGTA--ATA--ACCATT-TT------------------------------c-ag--ttt--tgt
i Chlorocebus_pygerythrus.k141_1486215                  C 0 I 135
s Chlorocebus_sabaeus.CM001963.2                        101143970 26 + 101219884 AG-AGTA--ATA--ACCATT-TT------------------------------C-AG--TTT--TGT
i Chlorocebus_sabaeus.CM001963.2                        C 0 I 135
s Choloepus_didactylus.ChoDid_scaffold_36182                15726 26 -     21363 TG-ATTA--GTA--ACTATT-TT------------------------------A-AG--TGT--TTC
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 I 115
s Choloepus_hoffmanni.KN194586.1                           761033 26 +    964067 TG-ATTA--GTA--ACTATT-TT------------------------------A-AG--TGT--TTC
i Choloepus_hoffmanni.KN194586.1                        C 0 I 115
s Colobus_angolensis.KN985967.1                          10885736 26 +  10971483 AG-AGTA--ATA--ACCATT-TT------------------------------C-AG--TTT--TGT
i Colobus_angolensis.KN985967.1                         C 0 I 135
s Colobus_guereza.LG08                                  147663900 26 + 156195979 AG-AGTA--ATA--ACCATT-TT------------------------------c-ag--ttt--tgt
i Colobus_guereza.LG08                                  C 0 I 135
s Colobus_polykomos.k141_1406057                            15885 26 +     23629 AG-AGTA--ATA--ACCATT-TT------------------------------c-ag--ttt--tgt
i Colobus_polykomos.k141_1406057                        C 0 I 135
s Condylura_cristata.JH655880.1                          60612708 26 +  78930452 aa-attt--ata--atcatt-tt------------------------------c-aa--aCT--TCT
i Condylura_cristata.JH655880.1                         C 0 I 136
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         38900 25 -     40477 AA-ATTA--ATA--ACCATT-AT------------------------------TCAT--T----tgt
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 I 137
s Cricetomys_gambianus.CriGam_scaffold_949                 277784 26 -    399297 AG-AGTA--ATA--ATTGTT-TA------------------------------C-AG--TTT--TGA
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 I 135
s Cricetulus_griseus.LT883672.1                          53028459 26 +  72327488 AA-AGTA--ATA--ATTACT-TT------------------------------C-AA--TTT--TAT
i Cricetulus_griseus.LT883672.1                         C 0 I 132
s Cryptoprocta_ferox.CryFer_flattened_line_19014            51218 26 -     70449 AA-ATTA--ATC--AATATT-TT------------------------------C-AA--CTT--Cgt
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 I 135
s Ctenodactylus_gundi.CteGun_scaffold_447                  207411 26 -    956709 AG-ATTA--ATG--AGTATT-TT------------------------------T-AG--TTT--TGT
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 I 127
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 29999 26 -     67205 AA-ATTA--GTA--ACCATT-TC------------------------------C-TG--TTT--TGT
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 I 130
s Cuniculus_paca.CunPac_flattened_line_16637                17007 26 +     26546 GG-ATTA--GTA--ACCACT-GT------------------------------A-AA--TTT--TGT
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 I 135
s Dasyprocta_punctata.DasPun_flattened_line_634             58094 26 -    236241 GG-ATTA--GTA--AACACT-TC------------------------------T-AG--TTT--TGT
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 I 134
s Dasypus_novemcinctus.JH568778.1                          182883 23 -   6883506 TG-ATTA--GTA--A---TT-TT------------------------------A-ag--tgt--tgg
i Dasypus_novemcinctus.JH568778.1                       C 0 I 156
s Daubentonia_madagascariensis.ctg11                     16844135 26 +  31942871 AG-ATTA--ATA--AGCATT-TT------------------------------c-ag--ttt--tgt
i Daubentonia_madagascariensis.ctg11                    C 0 I 135
s Delphinapterus_leucas.KZ290064.1                       80036043 26 -  96802777 AA-GTTA--ATA--ACTGTT-TT------------------------------C-TG--CTT--tgt
i Delphinapterus_leucas.KZ290064.1                      C 0 I 135
s Desmodus_rotundus.KZ672188.1                           18698036 14 -  18957592 -----------------ATT-AT------------------------------C-AG--TTT--TCT
i Desmodus_rotundus.KZ672188.1                          I 2 I 135
s Dicerorhinus_sumatrensis.PEKH010003161.1                 321736 26 +    993696 aa-atta--ata--accaGT-TT------------------------------A-AG--TTT--tgt
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 I 134
s Diceros_bicornis.DicBicMic_scaffold_9545                   2386 26 +    151128 AA-ATTA--ATA--ACCAGT-TT------------------------------A-AG--TTT--tgt
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 I 134
s Dipodomys_ordii.KN672545.1                              3655391 26 +   4240102 aa-atta--ata--aatgtt-tt------------------------------c-ag--taa--tat
i Dipodomys_ordii.KN672545.1                            C 0 I 101
s Dipodomys_stephensi.DipSte_scaffold_44365                 27024 26 +     28912 AA-ATTA--ATA--AATGTT-TT------------------------------C-AG--TAA--TAT
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 I 101
s Dolichotis_patagonum.DolPat_scaffold_14102                35347 26 -     73477 GG-ATTA--GTA--ACCACT-TT------------------------------c-ag--ttt--tgt
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 I 135
s Eidolon_helvum.KE772537.1                                 11406 48 +     24177 aa----aaaaaa--accact-gtcCTTACTCCCTGTGTTGGGATGCAATGTATA-A-----------
i Eidolon_helvum.KE772537.1                             I 22 I 138
s Elaphurus_davidianus.JRFZ01086400.1                     1490709  9 +   1727528 -----------------------------------------------------C-GG--TTT--TGT
i Elaphurus_davidianus.JRFZ01086400.1                   I 10 I 134
s Ellobius_lutescens.LOEQ01003611.1                        239018 26 -    369425 AA-AGGA--ATA--ATTAGT-AT------------------------------A-AA--TTT--TAT
i Ellobius_lutescens.LOEQ01003611.1                     C 0 I 133
s Ellobius_talpinus.LOJH01090055.1                           6131 26 -      7838 AA-AGTA--ATA--ATTACT-AT------------------------------A-AA--TTT--TGT
i Ellobius_talpinus.LOJH01090055.1                      C 0 I 135
s Enhydra_lutris.KZ291749.1                              85871384 26 +  99434291 aa-atta--ata--aatatt-tt------------------------------a-aa--tct--tgt
i Enhydra_lutris.KZ291749.1                             C 0 I 117
s Eptesicus_fuscus.JH977687.1                             4703419 26 +   6522550 TA-ATTA--ATA--ACCATT-AT------------------------------c-ag--ttt--tgc
i Eptesicus_fuscus.JH977687.1                           I 4 I 128
s Equus_asinus.JREZ01000062.1                             5852139 26 -   7175178 AA-ATTA--ATA--ACCAGT-TG------------------------------c-ag--ttt--tgt
i Equus_asinus.JREZ01000062.1                           C 0 I 131
s Equus_caballus.CM000402.2                              13350642 26 +  41866177 AG-ATTA--ATA--ACCAGT-TG------------------------------C-AG--TTT--TGT
i Equus_caballus.CM000402.2                             C 0 I 131
s Equus_przewalskii.ATBW01073585.1                          12132 26 +     92910 AG-ATTA--ATA--ACCAGT-TG------------------------------c-ag--ttt--tgt
i Equus_przewalskii.ATBW01073585.1                      C 0 I 131
s Erythrocebus_patas.Contig8                             48770537 26 -  48907691 AG-AGTA--ATA--ACCATT-TT------------------------------c-ag--ttt--tgt
i Erythrocebus_patas.Contig8                            C 0 I 135
s Eschrichtius_robustus.EscRob_flattened_line_685          314249 26 +    330699 AA-GTTA--ATA--ACTGTT-TT------------------------------C-TG--CTT--tgt
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 I 135
s Eubalaena_japonica.EubJap_flattened_line_7756             60703 26 +     89355 AA-GTTA--ATA--ACTGTT-TT------------------------------C-TG--CTT--TGT
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 I 135
s Eulemur_albifrons.k141_715837                              4321 26 +     13586 AG-ACTA--ATA--ACCATT-TT------------------------------C-AA--TTT--TGT
i Eulemur_albifrons.k141_715837                         C 0 I 135
s Eulemur_collaris.k141_311830                               4258 26 -      6809 AG-ACTA--ATA--ACCATT-TT------------------------------C-AA--TTT--TGT
i Eulemur_collaris.k141_311830                          C 0 I 135
s Eulemur_coronatus.k141_3240342                            10731 26 +     36558 AG-ACTA--ATA--ACCATT-TT------------------------------C-AG--TTT--TGT
i Eulemur_coronatus.k141_3240342                        C 0 I 135
s Eulemur_flavifrons.k141_903901                             7050 26 +     60246 AG-ACTA--ATA--ACCATT-TT------------------------------C-AG--TTT--TGT
i Eulemur_flavifrons.k141_903901                        C 0 I 135
s Eulemur_fulvus.k141_653297                                10529 26 +    109717 AG-ACTA--ATA--ACCATT-TT------------------------------C-AG--TTT--TGT
i Eulemur_fulvus.k141_653297                            C 0 I 135
s Eulemur_macaco.k141_1341545                               14912 26 +     16540 AG-ACTA--ATA--ACCATT-TT------------------------------C-AG--TTT--TGT
i Eulemur_macaco.k141_1341545                           C 0 I 135
s Eulemur_mongoz.k141_825972                                15185 26 +     27497 AG-ACTA--ATA--ACCATT-TT------------------------------C-AG--TTT--TGT
i Eulemur_mongoz.k141_825972                            C 0 I 135
s Eulemur_rubriventer.k141_411740                           17642 26 +     26808 AG-ACTA--ATA--ATCATT-TT------------------------------C-AG--TTT--TGT
i Eulemur_rubriventer.k141_411740                       C 0 I 135
s Eulemur_rufus.k141_1620292                                32377 26 +     46535 AG-ACTA--ATA--ACCATT-TT------------------------------C-AG--TTT--TGT
i Eulemur_rufus.k141_1620292                            C 0 I 135
s Eulemur_sanfordi.k141_186399                              15099 26 -     29447 AG-ACTA--ATA--ACCATT-TT------------------------------C-AG--TTT--TGT
i Eulemur_sanfordi.k141_186399                          C 0 I 135
s Felis_catus.CM001386.2                                129892183 26 - 159252932 AA-ATCA--AAA--AACGTT-TT------------------------------C-AA--CTT--tgt
i Felis_catus.CM001386.2                                C 0 I 130
s Felis_catus_fca126.CM031420.1                         129279252 26 - 158578461 Aa-atca--aaa--aacatt-tt------------------------------c-aa--ctt--tgt
i Felis_catus_fca126.CM031420.1                         C 0 I 130
s Felis_nigripes.FelNig_flattened_line_8080                 20397 26 +     52776 AA-ATCA--AAA--AACGTT-TT------------------------------C-AA--CTT--tgt
i Felis_nigripes.FelNig_flattened_line_8080             C 0 I 130
s Galeopterus_variegatus.GalVar_scaffold_354               155538 26 +    324696 AA-ATTA--ATA--ATTATT-TT------------------------------c-ag--ttt--tgt
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 I 135
s Giraffa_tippelskirchi.LVKQ01S012154.1                    180498 10 -    189561 aa-atta--ata--a----------------------------------------------------
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 I 141
s Glis_glis.GliGli_scaffold_79770                           12370  8 -     18683 AA-ATTA--AT--------------------------------------------------------
i Glis_glis.GliGli_scaffold_79770                       C 0 I 99
s Gorilla_beringei.k141_111300                               4602 26 -     14630 AG-ATTA--ATA--ATGATT-TT------------------------------c-ag--ttt--tgt
i Gorilla_beringei.k141_111300                          C 0 I 135
s Gorilla_gorilla.LT578340.1                            119651701 26 - 195582420 AG-ATTA--ATA--ATGATT-TT------------------------------c-ag--ttt--tgt
i Gorilla_gorilla.LT578340.1                            C 0 I 135
s Graphiurus_murinus.GraMur_scaffold_4493                   76860 26 +    118900 AA-ATTG--ATA--ATGATT-TT------------------------------T-AT--TTT--tgt
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 I 135
s Hapalemur_alaotrensis.k141_1280836                         1115 26 +     10286 AG-ACTA--ATA--ACCATT-TT------------------------------C-AG--TTT--TGT
i Hapalemur_alaotrensis.k141_1280836                    C 0 I 135
s Hapalemur_gilberti.k141_1254239                            9291 26 +      9690 AG-ACTA--ATA--ACCATT-TT------------------------------C-AG--TTT--TGT
i Hapalemur_gilberti.k141_1254239                       C 0 I 135
s Hapalemur_griseus.k141_1387522                             4921 26 +     56096 AG-ACTA--ATA--ACCATT-TT------------------------------C-AG--TTT--TGT
i Hapalemur_griseus.k141_1387522                        C 0 I 135
s Hapalemur_meridionalis.k141_186231                        28171 26 -     42470 AG-ACTA--ATA--ACCATT-TT------------------------------C-AG--TTT--TGT
i Hapalemur_meridionalis.k141_186231                    C 0 I 135
s Hapalemur_occidentalis.k141_797938                        44794 26 -     54384 AG-ACTA--ATA--ACCATT-TT------------------------------C-AG--TTT--TGT
i Hapalemur_occidentalis.k141_797938                    C 0 I 135
s Helogale_parvula.HelPar_flattened_line_22962              16424 26 +     53719 GA-ATTA--ATC--AACATT-TT------------------------------C-AA--CTT--tgt
i Helogale_parvula.HelPar_flattened_line_22962          C 0 I 135
s Hemitragus_hylocrius.HemHyl_scaffold_16669                26706  9 -     91191 -----------------------------------------------------C-GG--TTT--TGT
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 10 I 134
s Heterocephalus_glaber.JH602058.1                        2550331 26 +  31725842 GG-ATTA--GTA--ACCACT-TT------------------------------C-AG--TTT--TGT
i Heterocephalus_glaber.JH602058.1                      C 0 I 140
s Heterohyrax_brucei.HetBruBak_scaffold_25354               56752  1 +     73687 ------------------------------------------------------------------T
i Heterohyrax_brucei.HetBruBak_scaffold_25354           I 1 I 135
s Hippopotamus_amphibius.HipAmp_scaffold_1308              146325 26 +    277961 AA-GCTA--ATA--ACTGTT-TT------------------------------C-TG--TTT--Cgt
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 I 135
s Hipposideros_armiger.JXIK01001085.1                      277615 26 -    477199 AA-ATTA--ATA--ACCATT-GT------------------------------c-ag--t--tttgt
i Hipposideros_armiger.JXIK01001085.1                   C 0 I 134
s Hipposideros_galeritus.HipGal_scaffold_104691              6767 26 -      9143 AA-ATTA--ATA--ACCATT-GT------------------------------c-ag--t--tttgt
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 I 134
s Hoolock_leuconedys.ctg649                                   103031 26 +    115816 AG-ATTA--ATA--ATCATT-TT------------------------------c-ag--ttt--tgt
i Hoolock_leuconedys.ctg649                                I 57 I 143
s Hyaena_hyaena.HyaHya_flattened_line_20729                 16509 26 -     67322 AA-ATTA--ATC--AACATT-TT------------------------------C-AA--TTT--tgt
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 I 134
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           18226 26 -    119109 GG-ATTA--GTA--ACAACT-TT------------------------------C-AG--TTT--TGT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 I 135
s Hylobates_abbotti.k141_493872                              4434 26 +      5897 AG-ATTA--ATA--ATCATT-TT------------------------------c-ag--ttt--tgt
i Hylobates_abbotti.k141_493872                         C 0 I 135
s Hylobates_agilis.k141_624065                               1298 26 +      2112 AG-ATTA--ATA--ATCATT-TT------------------------------c-ag--ttt--tgt
i Hylobates_agilis.k141_624065                          C 0 I 135
s Hylobates_klossii.k141_466549                             10874 26 +     11537 AG-ATTA--ATA--ATCATT-TT------------------------------c-ag--ttt--tgt
i Hylobates_klossii.k141_466549                         C 0 I 135
s Hylobates_pileatus_b.ContigUN                                 14623979 26 -  25970782 AG-ATTA--ATC--ATCATT-TT------------------------------c-ag--ttt--tgt
i Hylobates_pileatus_b.ContigUN                                C 0 I 135
s Hylobates_muelleri.k141_1389047                            1235 26 -      2977 AG-ATTA--ATA--ATCATT-TT------------------------------c-ag--ttt--tgt
i Hylobates_muelleri.k141_1389047                       C 0 I 135
s Hystrix_cristata.HysCri_scaffold_50788                     5394 26 +     22540 GG-ATTA--GTT--ACAATT-TT------------------------------C-AG--ATT--TGT
i Hystrix_cristata.HysCri_scaffold_50788                C 0 I 135
s Ictidomys_tridecemlineatus.JH393315.1                   7125121 26 +  13083262 AG-AGTA--ACA--ACAATT-TT------------------------------T-GG--TTT--tgt
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 I 131
s Indri_indri.k141_4418183                                    741 26 -      1457 AG-ATTA--ATA--ACCATT-TT------------------------------C-AG--TCT--TGT
i Indri_indri.k141_4418183                              C 0 I 135
s Inia_geoffrensis.IniGeo_flattened_line_66725               8243 26 +     17520 AA-GTTA--ATA--ACTGCT-TT------------------------------C-TG--CTT--TGT
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 I 135
s Jaculus_jaculus.JH725517.1                              8565002 26 +  11848649 AG-AGTA--ATA--ATCAAT-TT------------------------------T-AG--TTT--TGT
i Jaculus_jaculus.JH725517.1                            C 0 I 130
s Kogia_breviceps.KogBre_flattened_line_35920               22863 26 +     37189 AA-GTTA--ATA--ACTGTT-TT------------------------------C-TG--CTT--tgt
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 I 131
s Lagothrix_lagothricha.k141_12968                          49456 25 -    147782 AG-ATTA--ATA--ACCATT-T-------------------------------C-AG--TAT--TGT
i Lagothrix_lagothricha.k141_12968                      C 0 I 136
s Lasiurus_borealis.LasBor_scaffold_5102                   113516 26 -    115756 TA-ATTA--TTA--ACCATT-AC------------------------------c-ag--ttt--tgt
i Lasiurus_borealis.LasBor_scaffold_5102                I 4 I 117
s Lemur_catta.scaffold_1                                258406475 26 - 285822530 AG-ACTA--ATA--ACCATT-TT------------------------------C-AG--TTT--TGT
i Lemur_catta.scaffold_1                                C 0 I 135
s Lepilemur_ankaranensis.k141_884009                        23231 26 +     39228 AG-ATTA--ACA--ACCATT-TT------------------------------C-AG--TTT--TGT
i Lepilemur_ankaranensis.k141_884009                    C 0 I 135
s Lepilemur_dorsalis.k141_134267                            52606 26 +     63517 AG-ATTA--ATA--ACCATT-TT------------------------------C-AG--TTT--TGT
i Lepilemur_dorsalis.k141_134267                        C 0 I 135
s Lepilemur_ruficaudatus.k141_617879                        77856 26 +    116806 AG-ATTA--ATA--ACCATT-TT------------------------------C-AG--TTT--TGT
i Lepilemur_ruficaudatus.k141_617879                    C 0 I 135
s Lepilemur_septentrionalis.k141_578524                     30870 26 -     33031 AG-ATTA--ATA--ACCATT-TT------------------------------C-AG--TTT--TGT
i Lepilemur_septentrionalis.k141_578524                 C 0 I 135
s Leptonychotes_weddellii.KB714749.1                      3085185 26 -   3498232 aa-atta--ata--aacatt-tt------------------------------c-aa--ttt--tgt
i Leptonychotes_weddellii.KB714749.1                    C 0 I 131
s Lepus_americanus.LepAme_scaffold_62849                    12222 27 +     22452 AA-AAAA--ATC--ACCATTTTT------------------------------C-AG--TTT--TGT
i Lepus_americanus.LepAme_scaffold_62849                C 0 I 422
s Lipotes_vexillifer.KE558548.1                            135196 26 +   3060487 AA-GTTA--ATA--ACTGTT-TT------------------------------C-TG--CTT--tgt
i Lipotes_vexillifer.KE558548.1                         C 0 I 135
s Lophocebus_aterrimus.ctg55                             19247605 26 +  19376315 AG-AGTA--AAA--ACCATT-TT------------------------------c-ag--ttt--tgt
i Lophocebus_aterrimus.ctg55                            C 0 I 135
s Loxodonta_africana.GL010040.1                          20591322 27 -  62548349 ag-gtta--CTG--ATTATT-TT--T---------------------------A-ag--tgt--tat
i Loxodonta_africana.GL010040.1                         C 0 I 135
s Lycaon_pictus.CM007556.1                               11087327 26 +  39895028 aa-atta--ata--aacatt-tt------------------------------c-aa--ttt--ttt
i Lycaon_pictus.CM007556.1                              C 0 I 130
s Macaca_arctoides.k141_2201161                             19345 26 +     74745 AG-AGTA--AAA--ACCATT-TT------------------------------c-ag--ttt--tgt
i Macaca_arctoides.k141_2201161                         C 0 I 135
s Macaca_assamensis.Contig65                             12705801 26 +  12821369 AG-AGTA--AAA--ACCATT-TT------------------------------c-ag--ttt--tgt
i Macaca_assamensis.Contig65                            C 0 I 135
s Macaca_cyclopis.k119_893486                                1446 26 -      3136 AG-AGTA--AAA--ACCATT-TT------------------------------c-ag--ttt--tgt
i Macaca_cyclopis.k119_893486                           C 0 I 135
s Macaca_fascicularis.k141_155037                           46263 26 +     63263 AG-AGTA--AAA--ACCATT-TT------------------------------c-ag--ttt--tgt
i Macaca_fascicularis.k141_155037                       C 0 I 135
s Macaca_fuscata.k119_599327                                  966 26 -      2568 AG-AGTA--AAA--ACCATT-TT------------------------------c-ag--ttt--tgt
i Macaca_fuscata.k119_599327                            C 0 I 135
s Macaca_leonina.k141_467472                                 1552 26 -      7381 AG-AGTA--AAA--ACCATT-TT------------------------------c-ag--ttt--tgt
i Macaca_leonina.k141_467472                            C 0 I 135
s Macaca_maura.k141_251854                                  44770 26 -     79256 AG-AGTA--AAA--ACCATT-TT------------------------------c-ag--ttt--tgt
i Macaca_maura.k141_251854                              C 0 I 135
s Macaca_mulatta.NC_041755.1                            196034878 26 + 196197964 AG-AGTA--AAA--ACCATT-TT------------------------------C-AG--TTT--TGT
i Macaca_mulatta.NC_041755.1                            C 0 I 135
s Macaca_nemestrina.KQ004885.1                           11445046 26 +  11645122 AG-AGTA--AAA--ACCATT-TT------------------------------C-AG--TTT--TGT
i Macaca_nemestrina.KQ004885.1                          C 0 I 135
s Macaca_nigra.k141_282495                                   3717 26 -     46448 AG-AGTA--AAA--ACCATT-TT------------------------------c-ag--ttt--tgt
i Macaca_nigra.k141_282495                              C 0 I 135
s Macaca_radiata.k141_3680256                                1389 26 -     13212 AG-AGTA--AAA--ACCATT-TT------------------------------c-ag--ttt--tgt
i Macaca_radiata.k141_3680256                           C 0 I 135
s Macaca_siberu.k141_741907                                 15070 26 -     55006 AG-AGTA--AAA--ACCATT-TT------------------------------c-ag--ttt--tgt
i Macaca_siberu.k141_741907                             C 0 I 135
s Macaca_silenus.Contig12                                43840187 26 +  43892939 AG-AGTA--AAA--ACCATT-TT------------------------------c-ag--ttt--tgt
i Macaca_silenus.Contig12                               C 0 I 135
s Macaca_thibetana.k99_662710                               16356 26 -     24607 AG-AGTA--AAA--ACCATT-TT------------------------------c-ag--ttt--tgt
i Macaca_thibetana.k99_662710                           C 0 I 135
s Macaca_tonkeana.k141_2870633                               3722 26 -     27140 AG-AGTA--AAA--ACCATT-TT------------------------------c-ag--ttt--tgt
i Macaca_tonkeana.k141_2870633                          C 0 I 135
s Macroglossus_sobrinus.MacSob_scaffold_879                700812 20 +    802869 -G----A--AAA--ACTACT-AT------------------------------T-AG--T----tgt
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 I 133
s Mandrillus_leucophaeus.scaffold125                     43436764 26 -  43563597 AG-AGTA--AAA--ACCATT-TT------------------------------c-ag--ttt--tgt
i Mandrillus_leucophaeus.scaffold125                    C 0 I 135
s Mandrillus_sphinx.Contig144                             4449590 26 -   4543643 AG-AGTA--AAA--ACCATT-TT------------------------------c-ag--ttt--tgt
i Mandrillus_sphinx.Contig144                           C 0 I 135
s Marmota_marmota.CZRN01000005.1                         36872959 26 +  64221397 AG-AGTA--ACA--acaatt-tt------------------------------t-gg--ttt--tgt
i Marmota_marmota.CZRN01000005.1                        C 0 I 131
s Megaderma_lyra.MegLyr_scaffold_3562                       63621 26 -    234502 AA-ATGA--ACA--ATCATT-CT------------------------------c-agttt----tgt
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 I 135
s Mellivora_capensis.MelCap_flattened_line_15433              198 26 -     87323 AA-ATTA--ATA--AACATT-TT------------------------------A-AA--TTT--TGT
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 I 117
s Meriones_unguiculatus.MerUng_scaffold_52233               11967 26 +     15977 AA-AGTA--ATA--ATTATT-TT------------------------------C-AG--TTT--TGT
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 I 139
s Mesocricetus_auratus.KB708139.1                         1046168 26 -  26018355 GA-AGTA--ATA--ACTACT-TT------------------------------C-AG--TTT--TGT
i Mesocricetus_auratus.KB708139.1                       C 0 I 132
s Microcebus_murinus.CM007691.1                          16509485 26 +  47401472 AG-ATTA--ATA--ACCACT-TT------------------------------C-AG--TTT--TGT
i Microcebus_murinus.CM007691.1                         C 0 I 135
s Micronycteris_hirsuta.MicHir_scaffold_37978               21913 26 -     32043 TA-ATTA--ATC--ATCATT-AT------------------------------c-ag--ttt--tct
i Micronycteris_hirsuta.MicHir_scaffold_37978           I 4 I 135
s Microtus_ochrogaster.CM001673.1                        22819311 26 -  98408828 AA-AGta--ata--attact-tt------------------------------a-aa--ttt--tgt
i Microtus_ochrogaster.CM001673.1                       C 0 I 135
s Miniopterus_natalensis.LDJU01000022.1                   8208909 26 +  10048721 TA-ACTA--ATA--ACCATT-AT------------------------------c-ag--ttt--tgt
i Miniopterus_natalensis.LDJU01000022.1                 I 4 I 135
s Miniopterus_schreibersii.MinSch_scaffold_24116            33561 26 +     45743 TA-ATTA--ATA--AGCATT-AT------------------------------c-ag--ttt--tgt
i Miniopterus_schreibersii.MinSch_scaffold_24116        I 4 I 135
s Miopithecus_ogouensis.k141_2935907                         1317 26 +     29742 AG-AGTA--AAA--ACCATT-TT------------------------------c-ag--ttt--tgt
i Miopithecus_ogouensis.k141_2935907                    C 0 I 135
s Mirounga_angustirostris.MirAng_flattened_line_8852        10698 26 -    104932 AA-ATTA--ATA--AACATT-TT------------------------------C-AA--TTT--tgt
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 I 131
s Mirza_zaza.k141_226143                                     4875 26 +      8497 AG-ATTA--ATA--ACCATT-TT------------------------------c-ag--ttt--tgt
i Mirza_zaza.k141_226143                                C 0 I 135
s Monodon_monoceros.MonMon_M_scaffold_5598                 145631 26 +    154973 AA-GTTA--ATA--ACTGTT-TT------------------------------C-TG--CTT--tgt
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 I 135
s Mormoops_blainvillei.MorMeg_scaffold_2952                160424 26 +    265003 TA-ATTA--ATA--ACCATT-AC------------------------------c-ag--ttt--tgt
i Mormoops_blainvillei.MorMeg_scaffold_2952             I 4 I 135
s Moschus_moschiferus.MosMos_scaffold_146101                 3809  9 -      4346 -----------------------------------------------------C-AG--TTT--TGT
i Moschus_moschiferus.MosMos_scaffold_146101            I 10 N 0
s Mungos_mungo.MunMun_flattened_line_8729                  144120 26 -    168139 AA-ATTA--ATC--AACATT-TT------------------------------C-AA--CTT--tgt
i Mungos_mungo.MunMun_flattened_line_8729               C 0 I 135
s Murina_feae.MurFea_scaffold_2254                          18780 28 -    100666 TA-ATTA--ATAAAACTATT-AT------------------------------C-AG--TTT--TGC
i Murina_feae.MurFea_scaffold_2254                      I 4 I 135
s Mus_caroli.LT608236.1                                  70765824 26 +  92629107 AG-AGta--ata--attatt-tt------------------------------c-ag--ttt--tgt
i Mus_caroli.LT608236.1                                 C 0 I 131
s Mus_musculus.chr16                                     75488888 26 +  98207768 AG-AGTA--ata--attatt-tt------------------------------c-ag--ttt--tgt
i Mus_musculus.chr16                                    C 0 I 129
s Mus_pahari.LT608305.1                                  67555109 26 +  89017189 ag-aata--ata--attatt-tt------------------------------c-ag--ttt--tgt
i Mus_pahari.LT608305.1                                 C 0 I 131
s Mus_spretus.CM004110.1                                 74330064 26 +  97876770 AG-AGta--ata--attatt-tt------------------------------c-ag--ttt--tgt
i Mus_spretus.CM004110.1                                C 0 I 131
s Muscardinus_avellanarius.MusAve_scaffold_9643             10885 26 +     98495 AC-ATTA--ATA--ACTATT-TT------------------------------C-AG--TTT--TCT
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 I 135
s Mustela_putorius.JH417978.1                             4423563 26 -  28371801 aa-atta--ata--aacatt-at------------------------------a-aa--ttt--tGT
i Mustela_putorius.JH417978.1                           C 0 I 117
s Myocastor_coypus.MyoCoy_scaffold_3653                     89282 26 -    117718 GG-GTCA--GTA--ACCACC-TT------------------------------C-TG--TCT--TGC
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 I 129
s Myotis_brandtii.KE161952.1                               967075 26 +   8389877 TA-ATTA--ATA--ACCATT-AT------------------------------c-ag--ttt--tgt
i Myotis_brandtii.KE161952.1                            I 4 I 135
s Myotis_davidii.KB114863.1                               5018751 26 +   6462685 TA-ATTA--ATA--ACCATT-AT------------------------------c-ag--ttt--tgt
i Myotis_davidii.KB114863.1                             I 4 I 135
s Myotis_lucifugus.GL429887.1                             3464655 26 -   3747815 TA-ATTA--ATA--ACCATT-AT------------------------------c-ag--ttt--tgt
i Myotis_lucifugus.GL429887.1                           I 4 I 135
s Myotis_myotis.MyoMyo_scaffold_6123                         9870 26 +     66751 TA-ATTA--ATA--ACCATT-AT------------------------------c-ag--ttt--tgt
i Myotis_myotis.MyoMyo_scaffold_6123                    I 4 I 135
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             4283 24 -      8794 TG-ATTA--GTA--ACTATT-TT------------------------------A-AA----T--TGC
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 I 133
s Nannospalax_galili.KL201303.1                            117672 26 +    362372 AG-AGTA--ata--atcatt-tt------------------------------t-ag--ttt--tgt
i Nannospalax_galili.KL201303.1                         C 0 I 140
s Nasalis_larvatus.k141_153429                               7819 26 +     48152 AG-AGTA--ATA--ACCATT-TT------------------------------c-ag--ttc--tgt
i Nasalis_larvatus.k141_153429                          C 0 I 134
s Neomonachus_schauinslandi.NINY01007774.1                4484090 26 -  14209539 aa-atta--ata--aacatt-tt------------------------------c-aa--ttt--tgt
i Neomonachus_schauinslandi.NINY01007774.1              C 0 I 131
s Neophocaena_asiaeorientalis.KZ688543.1                  3950246 26 -   4490290 AA-GTTA--ATA--ACTGTT-TT------------------------------C-TG--CTT--tgt
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 I 135
s Noctilio_leporinus.NocLep_scaffold_12062                  48526 26 +     94413 TC-ATTA--ATA--ACCATT-AT------------------------------c-ag--ttt--tgt
i Noctilio_leporinus.NocLep_scaffold_12062              I 4 I 135
s Nomascus_annamensis.k141_302224                            1276 26 +      1516 AG-ATTA--ATA--ATCATT-TT------------------------------c-ag--ttt--tgt
i Nomascus_annamensis.k141_302224                       C 0 I 135
s Nomascus_concolor.k141_226614                               536 26 -      5092 AG-ATTA--ATA--ATCATT-TT------------------------------c-ag--ttt--tgt
i Nomascus_concolor.k141_226614                         C 0 I 135
s Nomascus_gabriellae.k141_642452                            1319 26 +      2851 AG-ATTA--ATA--ATCATT-TT------------------------------c-ag--ttt--tgt
i Nomascus_gabriellae.k141_642452                       C 0 I 135
s Nomascus_siki_b.tarseq_80                             24254 26 -  18771707 AG-ATTA--ATA--ATCATT-TT------------------------------c-ag--ttt--tgt
i Nomascus_siki_b.tarseq_80                         C 0 I 135
s Nomascus_siki_a.k141_595747                                  1957 26 +      4512 AG-ATTA--ATA--ATCATT-TT------------------------------c-ag--ttt--tgt
i Nomascus_siki_a.k141_595747                             C 0 I 135
s Nyctereutes_procyonoides.CAJHUB010000786.1                30132 26 +   3668941 aa-atta--ata--aacatt-tt------------------------------c-aa--ttt--ttt
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 I 130
s Ochotona_princeps.JH802095.1                            4995308 27 -  23139505 AG-ATaa-gatt--tccatttt-------------------------------c-tg--ttt--tgt
i Ochotona_princeps.JH802095.1                          C 0 I 126
s Octodon_degus.JH651621.1                                3684823 26 +  10294119 gg-atta--gta--accact-tt------------------------------c-tg--ttt--tgt
i Octodon_degus.JH651621.1                              C 0 I 130
s Odobenus_rosmarus.KB229587.1                            1048208 26 +   1475581 aa-atta--ata--aacatt-tt------------------------------c-aa--ttt--tgt
i Odobenus_rosmarus.KB229587.1                          n 164 I 131
s Odocoileus_virginianus.KZ101650.1                       1078940  9 +   1425656 -----------------------------------------------------C-GG--TTT--TGT
i Odocoileus_virginianus.KZ101650.1                     I 10 I 134
s Okapia_johnstoni.LVCL01S0017931.1                         36234  9 +     78940 -----------------------------------------------------C-GG--TTT--TGT
i Okapia_johnstoni.LVCL01S0017931.1                     I 10 I 134
s Ondatra_zibethicus.OndZib_scaffold_6821                  124568 26 +    145789 AA-AGTA--ATA--ATTACT-TT------------------------------A-AA--TTT--TGT
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 I 135
s Onychomys_torridus.OnyTor_scaffold_12578                  36369 26 +     62360 AA-AGTA--ACA--ATTACT-TA------------------------------C-AG--TTT--TCA
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 I 133
s Orcinus_orca.KB316965.1                                 7223928 26 -   7562323 AA-GTTA--ATA--ACTGTT-TT------------------------------C-TG--CTT--tgt
i Orcinus_orca.KB316965.1                               C 0 I 135
s Oryctolagus_cuniculus.CM000803.1                      141875242 28 + 163896628 aaaaaaa--atc--accattttt------------------------------c-AG--TTT--TGT
i Oryctolagus_cuniculus.CM000803.1                      C 0 I 443
s Otocyon_megalotis.JAEUCK010005121.1                      307413 26 -    505867 aa-atta--ata--aacatt-tt------------------------------c-aa--ttt--ttt
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 I 130
s Ovis_aries.CM001582.2                                 134076500  9 - 275406953 -----------------------------------------------------C-GG--TTT--TGT
i Ovis_aries.CM001582.2                                 I 10 I 134
s Ovis_canadensis.OviCan_scaffold_6251                      77714  9 +    140051 -----------------------------------------------------C-GG--TTT--TGT
i Ovis_canadensis.OviCan_scaffold_6251                  I 10 I 134
s Pan_paniscus.AJFE02000033.1                                 292 26 -      1012 AG-ATTA--ATA--ACCATT-TT------------------------------C-AG--TTT--TGT
i Pan_paniscus.AJFE02000033.1                           I 3 I 161
s Pan_troglodytes.NBAG03003562.1                            12429 26 +     18198 AG-ATTA--ATA--ACCATT-TT------------------------------C-AG--TTT--TGT
i Pan_troglodytes.NBAG03003562.1                        I 3 I 57
s Panthera_onca.PanOnc_flattened_line_1615                  33565 26 +    295523 AA-ATCA--AAA--AACGTT-TT------------------------------C-AA--CTT--tgt
i Panthera_onca.PanOnc_flattened_line_1615              C 0 I 130
s Panthera_pardus.KV860323.1                              3637301 26 +  18214204 AA-ATCA--AAA--AACGTT-TT------------------------------C-AA--CTT--tgt
i Panthera_pardus.KV860323.1                            C 0 I 130
s Panthera_tigris.KE721879.1                              5026960 26 -   6340057 AA-ATCA--AAA--AACGTT-TT------------------------------C-AA--CTT--tgt
i Panthera_tigris.KE721879.1                            C 0 I 130
s Pantholops_hodgsonii.KE114631.1                         1065361  9 -   1292953 -----------------------------------------------------C-GG--TTT--TGT
i Pantholops_hodgsonii.KE114631.1                       I 10 I 133
s Papio_anubis.CM001492.2                               188155555 26 - 188283584 AG-AGTA--AAA--ACCATT-TT------------------------------C-AG--TTT--TGT
i Papio_anubis.CM001492.2                               C 0 I 135
s Papio_cynocephalus.k141_883042                             3872 26 +      5367 AG-AGTA--AAA--ACCATT-TT------------------------------c-ag--ttt--tgt
i Papio_cynocephalus.k141_883042                        C 0 I 135
s Papio_hamadryas.Contig15                               47512943 26 +  47705337 AG-AGTA--AAA--ACCATT-TT------------------------------c-ag--ttt--tgt
i Papio_hamadryas.Contig15                              C 0 I 135
s Papio_kindae.k141_5458022                                 66921 26 -    104429 AG-AGTA--AAA--ACCATT-TT------------------------------c-ag--ttt--tgt
i Papio_kindae.k141_5458022                             C 0 I 135
s Papio_papio.k141_979496                                    5453 26 +     14967 AG-AGTA--AAA--ACCATT-TT------------------------------c-ag--ttt--tgt
i Papio_papio.k141_979496                               C 0 I 135
s Papio_ursinus.k141_1345919                                 1314 26 -      7628 AG-AGTA--AAA--ACCATT-TT------------------------------c-ag--ttt--tgt
i Papio_ursinus.k141_1345919                            C 0 I 135
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    114993 26 -    135482 AA-ATTA--ATA--AGTGTT-TT------------------------------C-AA--CCT--tgt
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 I 136
s Perognathus_longimembris.PerPac_flattened_line_22291      42865 25 -     45160 AA-ATTA--ATG--AGCAG--TT------------------------------C-AG--AAT--TAA
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 I 133
s Peromyscus_maniculatus.KI615518.1                       4949601 26 -   8017169 AA-AGTA--ACA--ATTACT-TA------------------------------G-AG--TTT--TCG
i Peromyscus_maniculatus.KI615518.1                     C 0 I 137
s Petromus_typicus.PetTyp_scaffold_33007                    11758 26 -     36578 GG-CTTA--GGA--ACCACT-TT------------------------------C-AG--TTC--TGT
i Petromus_typicus.PetTyp_scaffold_33007                C 0 I 121
s Phocoena_phocoena.PhoPho_flattened_line_11948            120545 26 -    122454 AA-GTTA--ATA--ACTGTT-TT------------------------------C-TG--CTT--TGT
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 I 125
s Piliocolobus_badius.k141_1987485                           1341 26 -      5908 AG-AGTA--ATA--ACCATT-TT------------------------------c-ag--ttt--tgt
i Piliocolobus_badius.k141_1987485                      C 0 I 131
s Piliocolobus_gordonorum.k141_1270531                       1961 26 -     17985 AG-AGTA--ATA--ACCATT-TT------------------------------c-ag--ttt--tgt
i Piliocolobus_gordonorum.k141_1270531                  C 0 I 135
s Piliocolobus_kirkii.k141_929665                            1328 26 +      7694 AG-AGTA--ATA--ACCATT-TT------------------------------c-ag--ttt--tgt
i Piliocolobus_kirkii.k141_929665                       C 0 I 135
s Piliocolobus_tephrosceles.PDMG02000036.1               26739806 26 +  26888534 AG-AGTA--ATA--ACCATT-TT------------------------------C-AG--TTT--TGT
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 I 135
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            96724 22 +    112873 TA-A------TA--ACCATT-AT------------------------------C-AG--TTT--TGC
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        I 4 I 128
s Pithecia_albicans.k141_991845                             42938 25 -     61926 AG-ATTA--ATA--ACCACT-T-------------------------------C-AG--TTT--TGT
i Pithecia_albicans.k141_991845                         C 0 I 136
s Pithecia_chrysocephala.k141_159118                        24369 25 +     78826 AG-ATTA--ATA--ACCATT-T-------------------------------C-AG--TTT--TGT
i Pithecia_chrysocephala.k141_159118                    C 0 I 136
s Pithecia_hirsuta.k141_1152968                              8318 25 -     15800 AG-ATTA--ATA--ACCACT-T-------------------------------C-AG--TTT--TGT
i Pithecia_hirsuta.k141_1152968                         C 0 I 136
s Pithecia_mittermeieri.k141_2119203                        11516 25 -     16101 AG-ATTA--ATA--ACCACT-T-------------------------------C-AG--TTT--TGT
i Pithecia_mittermeieri.k141_2119203                    C 0 I 136
s Pithecia_pissinattii.k141_1102319                          4825 25 +      9673 AG-ATTA--ATA--ACCACT-T-------------------------------C-AG--TTT--TGT
i Pithecia_pissinattii.k141_1102319                     C 0 I 136
s Pithecia_pithecia.tarseq_313                           13473821 25 -  19735023 AG-ATTA--ATA--ACCATT-T-------------------------------C-AG--TTT--TGT
i Pithecia_pithecia.tarseq_313                          C 0 I 136
s Pithecia_vanzolinii.k141_831006                           12727 25 -     31692 AG-ATTA--ATA--ACCACT-T-------------------------------C-AG--TTT--TGT
i Pithecia_vanzolinii.k141_831006                       C 0 I 136
s Platanista_gangetica.PlaMin_flattened_line_72990           4615 26 +     21690 AA-GTTA--ATA--ACTGTT-TT------------------------------C-TG--CTT--tgt
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 I 135
s Plecturocebus_bernhardi.k141_959214                       22160 25 +     44506 AG-ATTA--ATA--ACCATT-T-------------------------------C-AG--TTT--TGT
i Plecturocebus_bernhardi.k141_959214                   C 0 I 136
s Plecturocebus_brunneus.k141_498086                        22372 25 +     67491 AG-ATTA--ATA--ACCATT-T-------------------------------C-AG--TTT--TGT
i Plecturocebus_brunneus.k141_498086                    C 0 I 136
s Plecturocebus_caligatus.k141_2539816                      12611 25 -     98129 AG-ATTA--ATA--ACCATT-T-------------------------------C-AG--TTT--TGT
i Plecturocebus_caligatus.k141_2539816                  C 0 I 136
s Plecturocebus_cinerascens.k141_744510                     22211 25 +    147771 AG-ATTA--ATA--ACCATT-T-------------------------------C-AG--TTT--TGT
i Plecturocebus_cinerascens.k141_744510                 C 0 I 136
s Plecturocebus_cupreus.k141_1223294                        22466 25 -     23762 AG-ATTA--ATA--ACCATT-T-------------------------------C-AG--TTT--TGT
i Plecturocebus_cupreus.k141_1223294                    C 0 I 136
s Plecturocebus_dubius.k141_3565563                          2932 25 -     55515 AG-ATTA--ATA--ACCATT-T-------------------------------C-AG--TTT--TGT
i Plecturocebus_dubius.k141_3565563                     C 0 I 136
s Plecturocebus_grovesi.k141_242819                         22285 25 +    152463 AG-ATTA--ATA--ACCATT-T-------------------------------C-AG--TTT--TGT
i Plecturocebus_grovesi.k141_242819                     C 0 I 136
s Plecturocebus_hoffmannsi.k141_985533                          2 25 -    119457 AG-ATTA--ATA--ACCATT-T-------------------------------C-AG--TTT--TGT
i Plecturocebus_hoffmannsi.k141_985533                  C 0 I 136
s Plecturocebus_miltoni.k141_841561                         12007 25 +    134592 AG-ATTA--ATA--ACCATT-T-------------------------------C-AG--TTT--TGT
i Plecturocebus_miltoni.k141_841561                     C 0 I 136
s Plecturocebus_moloch.k141_890597                          22595 25 -     75465 AG-ATTA--ATA--ACCATT-T-------------------------------C-AG--TTT--TGT
i Plecturocebus_moloch.k141_890597                      C 0 I 136
s Pongo_abelii.NDHI03003816.1                              186487 26 -    373494 AG-ATTA--ATA--ATCATT-TT------------------------------C-AG--TTT--TGT
i Pongo_abelii.NDHI03003816.1                           C 0 I 135
s Pongo_pygmaeus.ctg62                                   19807135 26 +  19899266 AG-ATTA--ATA--ATCATT-TT------------------------------c-ag--ttt--tgt
i Pongo_pygmaeus.ctg62                                  C 0 I 135
s Presbytis_comata.k141_672698                               5063 26 -     15069 AG-AGTA--ATA--ACCATT-TT------------------------------C-AG--TTT--TGT
i Presbytis_comata.k141_672698                          C 0 I 135
s Presbytis_mitrata.k141_860013                              5197 26 +     14865 AG-AGTA--ATA--ACCATT-TT------------------------------C-AG--TTT--TGT
i Presbytis_mitrata.k141_860013                         C 0 I 135
s Procavia_capensis.ProCapCap_scaffold_15315                76616  1 +     78963 ------------------------------------------------------------------T
i Procavia_capensis.ProCapCap_scaffold_15315            I 1 I 135
s Prolemur_simus.MPIZ01000048.1                           6847856 26 +  12164890 AG-ACTA--ATA--ACCATT-TT------------------------------C-AG--TTT--TGT
i Prolemur_simus.MPIZ01000048.1                         C 0 I 135
s Propithecus_coquerelli.NW_012147997.1                    667081 26 -   2312742 AG-ATTA--ATA--ACCATT-TT------------------------------C-AG--TCT--TGT
i Propithecus_coquerelli.NW_012147997.1                 C 0 I 135
s Propithecus_coronatus.k141_1353159                         2908 26 +     11805 AG-ATTA--ATA--ACCATT-TT------------------------------C-AG--TCT--TGT
i Propithecus_coronatus.k141_1353159                    C 0 I 135
s Propithecus_diadema.k141_577245                           42245 26 +     52369 AG-ATTA--ATA--ACCATT-TT------------------------------C-AG--TCT--TGT
i Propithecus_diadema.k141_577245                       C 0 I 135
s Propithecus_edwardsi.k141_1317105                         34633 26 -     44753 AA-ATTA--ATA--ACCATT-TT------------------------------C-AG--TCT--TGT
i Propithecus_edwardsi.k141_1317105                     C 0 I 135
s Propithecus_perrieri.k141_7554                            16555 26 +     27322 AG-ATTA--ATA--ACCATT-TT------------------------------C-AG--TCT--TGT
i Propithecus_perrieri.k141_7554                        C 0 I 135
s Propithecus_tattersalli.k141_907138                       16190 26 -     53241 AG-ATTA--ATA--ACCATT-TT------------------------------C-AG--TCT--TGT
i Propithecus_tattersalli.k141_907138                   C 0 I 135
s Propithecus_verreauxi.k141_158021                         38462 26 -     48185 AG-ATTA--ATA--ACCATT-TT------------------------------C-AG--TCT--TGT
i Propithecus_verreauxi.k141_158021                     C 0 I 135
s Psammomys_obesus.NESX01026517.1                           33521 26 +     77221 aa-agta--ata--attatt-tt------------------------------c-ag--ttt--tgt
i Psammomys_obesus.NESX01026517.1                       C 0 I 139
s Pteronotus_parnellii.KE867983.1                            3082 26 -     27784 TA-ATTT--ATa--actatt-tt------------------------------c-ag--ttt--tgt
i Pteronotus_parnellii.KE867983.1                       I 4 I 135
s Pteronura_brasiliensis.PteBra_flattened_line_1343        245872 26 -    344369 AA-ATTA--ATA--AATATT-TT------------------------------A-AA--TTT--TGT
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 I 117
s Pteropus_alecto.KB031157.1                             13245200 22 -  17261082 -a----a--aaa--actgct-at------------------------------t-aG--T--TTtgt
i Pteropus_alecto.KB031157.1                            I 2 I 135
s Pteropus_vampyrus.KN525959.1                             603152 20 -   3946241 ---------AAA--ACTGCT-AT------------------------------T-AG--T--TTtgt
i Pteropus_vampyrus.KN525959.1                          I 3 I 135
s Puma_concolor.QAVW01000427.1                          131533545 26 - 161321710 AA-ATCA--AAA--AACGTT-TT------------------------------C-AA--CTT--tgt
i Puma_concolor.QAVW01000427.1                          C 0 I 130
s Pygathrix_cinerea.k141_374971                             29181 26 +     56732 AG-AGTA--ATA--ACCATT-TT------------------------------c-ag--ttt--tgt
i Pygathrix_cinerea.k141_374971                         C 0 I 135
s Pygathrix_nigripes_b.ctg79                                 6805672 26 +   6970761 AG-AGTA--ATA--ACCATT-TT------------------------------c-ag--ttt--tgt
i Pygathrix_nigripes_b.ctg79                               C 0 I 135
s Pygathrix_nigripes_a.k141_101123                             5066 26 +     18040 AG-AGTA--ATA--ACCATT-TT------------------------------c-ag--ttt--tgt
i Pygathrix_nigripes_a.k141_101123                        C 0 I 135
s Rangifer_tarandus.RanTarSib_scaffold_24239                15017  9 +     68503 -----------------------------------------------------T-GG--TTT--TGT
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 10 I 134
s Rattus_norvegicus.chr11                                13914778 26 +  90463843 AG-GGTa--ata--attatt-tt------------------------------c-ag--ttt--tgt
i Rattus_norvegicus.chr11                               C 0 I 135
s Rhinolophus_sinicus.LVEH01000179.1                      1787023 26 +   2252614 AA-ATGA--ATA--ACTGTT-AT------------------------------C-AG--T--TTTCT
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 I 135
s Rhinopithecus_bieti.k119_1391695                           1294 26 -      1866 AG-AGTA--ATA--ACCATT-TT------------------------------c-ag--ttt--tgt
i Rhinopithecus_bieti.k119_1391695                      C 0 I 135
s Rhinopithecus_roxellana.NC_044549.1                   206376951 26 - 206558726 AG-AGTA--ATA--ACCATT-TT------------------------------C-AG--TTT--TGT
i Rhinopithecus_roxellana.NC_044549.1                   C 0 I 135
s Rhinopithecus_strykeri.ctg4                            44855851 26 -  45163003 AG-AGTA--ATA--ACCATT-TT------------------------------c-ag--ttt--tgt
i Rhinopithecus_strykeri.ctg4                           C 0 I 135
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                18513 23 +    109198 AA----C--AAA--AACACT-AT------------------------------T-AG--T--TTtgt
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            I 37 I 135
s Saiga_tatarica.SaiTat_scaffold_82192                       7180  9 +     12214 -----------------------------------------------------C-GG--TTT--TGT
i Saiga_tatarica.SaiTat_scaffold_82192                  I 10 I 134
s Saimiri_boliviensis.NW_024100938.1                     15672026 25 -  43202129 AG-ATTA--ATA--ACCATT-T-------------------------------C-AG--TTT--TGT
i Saimiri_boliviensis.NW_024100938.1                    C 0 I 136
s Saimiri_cassiquiarensis.k141_808270                        3943 25 +     34089 AG-ATTA--ATA--ACCATT-T-------------------------------C-AG--TTT--TGT
i Saimiri_cassiquiarensis.k141_808270                   C 0 I 136
s Saimiri_macrodon.k141_2087127                              3884 25 -     60842 AG-ATTA--ATA--ACCATT-T-------------------------------C-AG--TTT--TGT
i Saimiri_macrodon.k141_2087127                         C 0 I 136
s Saimiri_oerstedii.k141_841116                              3979 25 +     67014 AG-ATTA--ATA--ACCATT-T-------------------------------C-AG--TTT--TGT
i Saimiri_oerstedii.k141_841116                         C 0 I 136
s Saimiri_sciureus.k141_1947592                              3957 25 +     60816 AG-ATTA--ATA--ACCATT-T-------------------------------C-AG--TTT--TGT
i Saimiri_sciureus.k141_1947592                         C 0 I 136
s Saimiri_ustus.k141_1282476                                 3894 25 -     76454 AG-ATTA--ATA--ACCATT-T-------------------------------C-AG--TTT--TGT
i Saimiri_ustus.k141_1282476                            C 0 I 136
s Sapajus_apella.ctg10                                   17340619 25 -  30362882 AG-ATTA--ATA--ACCATT-T-------------------------------c-ag--ttt--tgt
i Sapajus_apella.ctg10                                  C 0 I 136
s Sapajus_macrocephalus.k141_966464                         19978 25 -     62485 AG-ATTA--ATA--ACCATT-T-------------------------------c-ag--ttt--tgt
i Sapajus_macrocephalus.k141_966464                     C 0 I 136
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   31513 24 -    114521 AA-ATTA----A--ATCATT-TT------------------------------C-AA--TAT--TCT
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 I 132
s Semnopithecus_entellus.k141_1572367                        2678 26 +     15331 AG-AGTA--ATA--ACCATT-TT------------------------------c-ag--ttt--tgt
i Semnopithecus_entellus.k141_1572367                   C 0 I 135
s Semnopithecus_hypoleucos.k141_761524                       8075 26 +     20762 AG-AGTA--ATA--ACCATT-TT------------------------------c-ag--ttt--tgt
i Semnopithecus_hypoleucos.k141_761524                  C 0 I 135
s Semnopithecus_johnii.k141_785014                         118077 26 +    130994 AG-AGTA--ATA--ACCATT-TT------------------------------c-ag--ttt--tgt
i Semnopithecus_johnii.k141_785014                      C 0 I 135
s Semnopithecus_priam.k141_410937                           36864 26 +     46263 AG-AGTA--ATA--ACCATT-TT------------------------------c-ag--ttt--tgt
i Semnopithecus_priam.k141_410937                       C 0 I 135
s Semnopithecus_schistaceus.k141_387461                     29978 26 +     42640 AG-AGTA--ATA--ACCATT-TT------------------------------c-ag--ttt--tgt
i Semnopithecus_schistaceus.k141_387461                 C 0 I 135
s Semnopithecus_vetulus.k141_1143185                        13022 26 +     30600 AG-AGTA--ATA--ACCATT-TT------------------------------c-ag--ttt--tgt
i Semnopithecus_vetulus.k141_1143185                    C 0 I 135
s Sigmodon_hispidus.SigHis_scaffold_11332                   99566 25 -    120886 A--ATTA--ATA--ATTGCT-TT------------------------------C-AG--TTT--TGT
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 I 131
s Solenodon_paradoxus.SolPar_flattened_line_1012            18083 26 +    739146 AA-CATA--ATC--TGCATT-TT------------------------------C-AT--TTT--TCT
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 I 135
s Spermophilus_dauricus.KZ294190.1                        2239040 25 +   2842873 -G-AGTA--ACA--ACAATT-TT------------------------------T-GG--CTT--tgt
i Spermophilus_dauricus.KZ294190.1                      C 0 I 131
s Spilogale_gracilis.SpiGra_flattened_line_905             233993 26 -    276980 AA-ATTA--ATA--AACATT-TT------------------------------A-AG--TTT--TGC
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 I 117
s Suricata_suricatta.SurSur_flattened_line_20339            26784 26 +     62062 AA-AGTA--AGC--AACATT-TT------------------------------C-AA--CTT--TGT
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 I 153
s Sus_scrofa.CM000824.4                                 189271068 17 + 218635234 aa-atta--ata--atcaCT-TT--------------------------------------------
i Sus_scrofa.CM000824.4                                 C 0 I 148
s Symphalangus_syndactylus.tarseq_24                        14236 26 -  13920577 AG-ATTA--ATA--ATCATT-TT------------------------------c-ag--ttt--tgt
i Symphalangus_syndactylus.tarseq_24                    C 0 I 135
s Tadarida_brasiliensis.TadBra_scaffold_145589               5252 26 -      6213 TA-ATTA--ATA--ACCGTT-AC------------------------------c-ag--tat--tgt
i Tadarida_brasiliensis.TadBra_scaffold_145589          I 4 I 134
s Tamandua_tetradactyla.TamTet_scaffold_26877               13959 24 +     45698 TG-ATTA--GTA--ACTATT-TT------------------------------A-AA----T--TGC
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 I 131
s Tapirus_indicus.TapInd_scaffold_176                      806107 26 +   1148477 AA-ATTA--ATA--ACCAGT-TT------------------------------C-AG--TTT--TGT
i Tapirus_indicus.TapInd_scaffold_176                   C 0 I 122
s Tapirus_terrestris.TapTer_scaffold_14939                  56798 26 +     99546 AA-ATTA--ATA--ACCAGT-TT------------------------------c-ag--ttt--tgt
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 I 122
s Tarsius_lariang.k141_609102                               25754 26 +     42269 AG-ATGA--ATA--ATCATT-TT------------------------------G-AG--TTT--CAT
i Tarsius_lariang.k141_609102                           C 0 I 132
s Tarsius_wallacei.k141_48636                               59070 26 +     65473 AG-ATGA--ATA--ATCATT-TT------------------------------G-AA--TTT--CAT
i Tarsius_wallacei.k141_48636                           C 0 I 132
s Theropithecus_gelada.CM009951.1                       194007082 26 - 194193292 AG-AGTA--AAA--ACCATT-TT------------------------------C-AG--TTT--TGT
i Theropithecus_gelada.CM009951.1                       C 0 I 135
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             38574 26 -     47444 GG-ATTA--GGA--AACACT-TT------------------------------C-AG--TTT--TGT
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 I 125
s Tolypeutes_matacus.TolMat_scaffold_269431                  4797 20 +      6782 TG-CTT-----A--A---TT-TT------------------------------A-ag--tgt--tgt
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 I 119
s Tonatia_saurophila.TonSau_scaffold_3334                  135096 14 -    259118 -----------------ATC-AT------------------------------c-ag--ttt--tct
i Tonatia_saurophila.TonSau_scaffold_3334               I 2 I 135
s Trachypithecus_auratus.k141_738098                        26185 26 +     38948 AG-AGTA--GTA--ACCATT-TT------------------------------c-ag--ttt--tgt
i Trachypithecus_auratus.k141_738098                    C 0 I 132
s Trachypithecus_crepusculus.k141_1588528                   19912 26 -     32910 AG-AGTA--ATA--ACCATT-TT------------------------------c-ag--ttt--tgt
i Trachypithecus_crepusculus.k141_1588528               C 0 I 135
s Trachypithecus_cristatus.k141_1011511                      1299 26 -     12939 AG-AGTA--GTA--ACCATT-TT------------------------------c-ag--ttt--tgt
i Trachypithecus_cristatus.k141_1011511                 C 0 I 135
s Trachypithecus_francoisi.k141_768164                       1234 26 -     14244 AG-AGTA--ATA--ACCATT-TT------------------------------c-ag--ttt--tgt
i Trachypithecus_francoisi.k141_768164                  C 0 I 135
s Trachypithecus_geei.k141_670367                           42632 26 -     54611 AG-AGTA--ATA--ACCATT-TT------------------------------c-ag--ttt--tgt
i Trachypithecus_geei.k141_670367                       C 0 I 135
s Trachypithecus_germaini.k141_868450                         438 26 -     11566 AG-AGTA--ATA--ACCATT-TT------------------------------c-ag--ttt--tgt
i Trachypithecus_germaini.k141_868450                   C 0 I 135
s Trachypithecus_hatinhensis.k141_504423                     2610 26 -     15592 AG-AGTA--ATA--ACCATT-TT------------------------------c-ag--ttt--tgt
i Trachypithecus_hatinhensis.k141_504423                C 0 I 135
s Trachypithecus_laotum.k141_760702                          1267 26 +     14371 AG-AGTA--ATA--ACCATT-TT------------------------------c-ag--ttt--tgt
i Trachypithecus_laotum.k141_760702                     C 0 I 135
s Trachypithecus_leucocephalus.k141_283605                  51019 26 +     51589 AG-AGTA--ATA--ACCATT-TT------------------------------c-ag--ttt--tgt
i Trachypithecus_leucocephalus.k141_283605              C 0 I 135
s Trachypithecus_melamera.k141_238507                       14200 26 +     14732 AG-AGTA--ATA--ACCATT-TT------------------------------c-ag--ttt--tgt
i Trachypithecus_melamera.k141_238507                   C 0 I 135
s Trachypithecus_obscurus.k141_1115109                       4672 26 -     28054 AG-AGTA--ATA--ACCATT-TT------------------------------c-ag--ttt--tgt
i Trachypithecus_obscurus.k141_1115109                  C 0 I 135
s Trachypithecus_phayrei.ctg3                            44659472 26 -  44834318 AG-AGTA--ATA--ACCATT-TT------------------------------c-ag--ttt--tgt
i Trachypithecus_phayrei.ctg3                           C 0 I 135
s Trachypithecus_pileatus.k141_1022309                       1775 26 +     13828 AG-AGTA--ATA--ACCATT-TT------------------------------c-ag--ttt--tgt
i Trachypithecus_pileatus.k141_1022309                  C 0 I 135
s Tragulus_javanicus.TraJav_scaffold_14717                   4383 26 +     90398 AA-GTTG--ACA--ACCATT-TT------------------------------C-TG--TTT--TGT
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 I 130
s Trichechus_manatus.JH594618.1                          16081774 27 +  31416278 ag-gtta--ttt--atcatt-tt-----------------------------tt-ag--tgc--tat
i Trichechus_manatus.JH594618.1                         C 0 I 134
s Tupaia_chinensis.KB320831.1                             2792152 24 -   3938065 AG-ATTA--CCA--ACCATT-TT------------------------------C-AA--TCC--C--
i Tupaia_chinensis.KB320831.1                           C 0 I 120
s Tupaia_tana.TupTan_flattened_line_68454                    4355 24 +     13056 AG-ATTA--CTA--ACCATT-TT------------------------------C-AA--TCC--C--
i Tupaia_tana.TupTan_flattened_line_68454               C 0 I 122
s Tursiops_truncatus.MRVK01000923.1                      69312645 26 -  96451834 AA-GTTA--ATA--ACTGTT-TT------------------------------C-TG--CTT--tgt
i Tursiops_truncatus.MRVK01000923.1                     C 0 I 135
s Uropsilus_gracilis.UroGra_scaffold_69449                    523 26 +     10241 AA-ATTA--ATA--ATAATT-TT------------------------------C-AG--TTT--TAT
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 I 134
s Ursus_maritimus.KK498671.1                              6514001 26 +  28682327 aa-atta--ata--aacatt-tt------------------------------c-ag--ttt--tgt
i Ursus_maritimus.KK498671.1                            C 0 I 131
s Varecia_rubra.k141_432109                                  4566 26 -     20643 AG-ATTA--ATA--ACCATT-TT------------------------------C-AG--TTT--TCT
i Varecia_rubra.k141_432109                             C 0 I 115
s Varecia_variegata.k141_775891                             24107 26 -     33872 AG-ATTA--ATA--ACCATT-TT------------------------------C-AG--TTT--TCT
i Varecia_variegata.k141_775891                         C 0 I 115
s Vicugna_pacos.KN269600.1                                1523889 26 -   2331223 AA-CTTA--GTA--ACCATT-TT------------------------------T-AC--TTt--tgt
i Vicugna_pacos.KN269600.1                              C 0 I 128
s Vulpes_lagopus.VulLag_flattened_line_2045                137510 26 -    281493 AA-ATTA--ATG--AACATT-TT------------------------------C-AA--TTT--TTt
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 I 130
s Xerus_inauris.XerIna_scaffold_7898                       126149 26 -    134049 AA-AGTA--ACA--ACAATT-TT------------------------------c-ag--ttt--tgt
i Xerus_inauris.XerIna_scaffold_7898                    C 0 I 133
s Zalophus_californianus.ZalCal_flattened_line_3895         77764 26 -    232890 AA-ATTA--ATA--AACATT-TT------------------------------C-AA--TTT--tgt
i Zalophus_californianus.ZalCal_flattened_line_3895     n 164 I 130
s Ziphius_cavirostris.ZipCav_flattened_line_127025           6140 26 -      8775 AA-GTTA--ATA--ACTGTT-TT------------------------------C-TG--CTT--tgt
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 I 135
e Sorex_araneus.JH798170.1                               17750754 3364 -  27805282 I
e Dinomys_branickii.DinBra_scaffold_1996                   156356 54 +    228994 I
e Erinaceus_europaeus.JH835290.1                         11531598 1064 +  16010500 I
e Orycteropus_afer.OryAfe_flattened_line_13509              43378 16 -     66828 I
e Microgale_talazaci.MicTal_scaffold_34660                  30638 409 -     48017 I
e Manis_pentadactyla.KN017078.1                             35015 87 +     58827 I
e Manis_javanica.JSZB01003966.1                            144940 87 +    252755 I
e Elephantulus_edwardii.JH947210.1                        7804622 10712 +  15467074 I
e Echinops_telfairi.JH980316.1                           22994192 422 -  44670279 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     14107 296 -     20485 I
e Hylobates_pileatus_a.tarseq_592                             33341 34 -     60944 I
e Perodicticus_potto.k141_713187                            23970 79 -     27972 I
e Perodicticus_ibeanus.k141_117958                           4661 79 -     23713 I
e Otolemur_garnettii.GL873528.1                          18007674 78 -  38779656 I
e Otolemur_crassicaudatus.k141_321880                       38246 79 +     38679 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65668684 79 +  89412551 I
e Nycticebus_coucang.k141_2051882                            3075 79 +      6470 I
e Nycticebus_bengalensis.LG16                            65566346 79 -  95554990 I
e Loris_tardigradus.ctg97                                 3777661 79 +   6799190 I
e Loris_lydekkerianus.k141_550999                            9912 79 +     84689 I
e Galagoides_demidoff.k141_1769638                           9597 79 +     27357 I
e Galago_senegalensis.k141_964197                           12529 70 -     43889 I
e Galago_moholi.ctg555                                     210150 70 -    847004 I
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I
e Arctocebus_calabarensis.k141_587554                         266 79 +      9265 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               11248 5 +    209709 GCTGA
s Acinonyx_jubatus.LLWD01000356.1                         2033363 5 +   3721120 ggaaa
i Acinonyx_jubatus.LLWD01000356.1                       I 130 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    112038 2 -    189883 GT---
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 137 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10656668 5 +  23371972 gggaa
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 131 C 0
s Ailurus_fulgens.LNAC01000003.1                          7094012 5 -  16596857 gcaaa
i Ailurus_fulgens.LNAC01000003.1                        I 336 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   16128 5 -     22067 GGACC
i Allactaga_bullata.AllBul_scaffold_70162               I 119 C 0
s Allenopithecus_nigroviridis.k141_2469532                    734 5 -     60446 gggca
i Allenopithecus_nigroviridis.k141_2469532              I 135 C 0
s Allochrocebus_lhoesti.k141_3566948                         1455 5 -     29318 gggca
i Allochrocebus_lhoesti.k141_3566948                    I 135 C 0
s Allochrocebus_preussi.k141_1108977                          392 5 +     38766 gggca
i Allochrocebus_preussi.k141_1108977                    I 135 C 0
s Allochrocebus_solatus.k141_371672                          1349 5 -     80423 gggca
i Allochrocebus_solatus.k141_371672                     I 135 C 0
s Alouatta_belzebul.k141_1818029                             9645 5 -     18050 gggca
i Alouatta_belzebul.k141_1818029                        I 133 C 0
s Alouatta_caraya.k141_5460                                 10738 5 -     11521 gggca
i Alouatta_caraya.k141_5460                             I 136 C 0
s Alouatta_discolor.k141_811576                             10322 5 -     21359 gggca
i Alouatta_discolor.k141_811576                         I 133 C 0
s Alouatta_juara.k141_298055                                 1619 5 +      1823 gggca
i Alouatta_juara.k141_298055                            I 136 C 0
s Alouatta_macconnelli.k141_1331706                          9621 5 -     10438 gggca
i Alouatta_macconnelli.k141_1331706                     I 136 C 0
s Alouatta_nigerrima.k141_2718643                            6277 5 +      7047 gggca
i Alouatta_nigerrima.k141_2718643                       I 136 C 0
s Alouatta_palliata.k141_1316127                             9557 5 +     10410 gggca
i Alouatta_palliata.k141_1316127                        I 136 C 0
s Alouatta_puruensis.k141_1284840                            3365 5 -      4927 gggca
i Alouatta_puruensis.k141_1284840                       I 136 C 0
s Alouatta_seniculus.k141_990213                             6294 5 +      6429 gggca
i Alouatta_seniculus.k141_990213                        I 136 C 0
s Ammotragus_lervia.NIVO01013474.1                        3519501 5 +   4113121 gggct
i Ammotragus_lervia.NIVO01013474.1                      I 134 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      389691 4 -    631301 g-gct
i Anoura_caudifer.AnoCau_scaffold_422                   I 135 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            30083 5 +     33004 GGGCT
i Antilocapra_americana.AntAmePen_scaffold_42841        I 134 C 0
s Aotus_azarae.k141_3170768                                 62007 5 +     78111 gggca
i Aotus_azarae.k141_3170768                             I 136 C 0
s Aotus_griseimembra.k141_3275623                            4948 5 +     22701 gggca
i Aotus_griseimembra.k141_3275623                       I 136 C 0
s Aotus_nancymaae.KZ196176.1                              5748905 5 +   9889416 GGGCA
i Aotus_nancymaae.KZ196176.1                            I 136 C 0
s Aotus_trivirgatus.k141_1740727                             5492 5 -    104377 gggca
i Aotus_trivirgatus.k141_1740727                        I 136 C 0
s Aotus_vociferans.k141_718647                               5494 5 +     23246 gggca
i Aotus_vociferans.k141_718647                          I 136 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     3114 5 +      5067 AGGTA
i Aplodontia_rufa.AprRuf_scaffold_156013                I 113 C 0
s Arctocebus_calabarensis.k141_587554                         345 5 +      9265 gggca
i Arctocebus_calabarensis.k141_587554                   I 79 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 8092 4 -     29036 g-gca
i Artibeus_jamaicensis.ArtJam_scaffold_41619            I 135 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9538753 5 +  39197703 gggca
i Ateles_geoffroyi_b.tarseq_2582                           I 136 C 0
s Ateles_belzebuth.k141_1348307                             60024 5 +     85812 gggca
i Ateles_belzebuth.k141_1348307                         I 136 C 0
s Ateles_chamek.k141_1072810                                11036 5 +     89302 gggca
i Ateles_chamek.k141_1072810                            I 136 C 0
s Ateles_geoffroyi_a.k141_1300742                             15541 5 -     58268 gggca
i Ateles_geoffroyi_a.k141_1300742                         I 136 C 0
s Ateles_marginatus.k141_899112                             63532 5 +    119057 gggca
i Ateles_marginatus.k141_899112                         I 136 C 0
s Ateles_paniscus.k141_1631200                               5501 5 -     25888 gggca
i Ateles_paniscus.k141_1631200                          I 136 C 0
s Avahi_laniger.k141_2840928                                 6140 5 -     16375 GGGCA
i Avahi_laniger.k141_2840928                            I 135 C 0
s Avahi_peyrierasi.k141_2689020                              2460 5 +      2719 GGGCA
i Avahi_peyrierasi.k141_2689020                         I 135 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26379526 5 +  51448160 ggact
i Balaenoptera_acutorostrata.KI537095.1                 I 135 C 0
s Balaenoptera_bonaerensis.DF502048.1                        4757 5 -     13118 ggact
i Balaenoptera_bonaerensis.DF502048.1                   I 135 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   42564 5 -     72089 GGGCT
i Beatragus_hunteri.BeaHun_scaffold_21644               I 134 C 0
s Bison_bison.KN264915.1                                  6559238 5 +   6870073 gggct
i Bison_bison.KN264915.1                                I 134 C 0
s Bos_indicus.CM003021.1                                138139342 5 - 161108492 gggct
i Bos_indicus.CM003021.1                                I 134 C 0
s Bos_mutus.JH883513.1                                     571879 5 -    998990 gggct
i Bos_mutus.JH883513.1                                  I 209 C 0
s Bos_taurus.CM000177.6                                 136295075 5 - 158972876 gggct
i Bos_taurus.CM000177.6                                 I 134 C 0
s Bubalus_bubalis.KI419065.1                              1232158 5 -   1914593 GGGCT
i Bubalus_bubalis.KI419065.1                            I 1450 C 0
s Cacajao_ayresi.k141_724503                               113391 5 -    171031 gggca
i Cacajao_ayresi.k141_724503                            I 133 C 0
s Cacajao_calvus.k141_96166                                 12422 5 +    125063 gggca
i Cacajao_calvus.k141_96166                             I 136 C 0
s Cacajao_hosomi.k141_303789                                14467 5 -    216513 gggca
i Cacajao_hosomi.k141_303789                            I 136 C 0
s Cacajao_melanocephalus.k141_1160263                        7007 5 -    134917 gggca
i Cacajao_melanocephalus.k141_1160263                   I 136 C 0
s Camelus_bactrianus.KN276303.1                           3218936 5 -   8989139 agaca
i Camelus_bactrianus.KN276303.1                         I 128 C 0
s Camelus_dromedarius.KN271192.1                           396640 5 -  15254737 agaca
i Camelus_dromedarius.KN271192.1                        I 128 C 0
s Camelus_ferus.KB016973.1                                2972373 5 +   6889770 agaca
i Camelus_ferus.KB016973.1                              I 128 C 0
s CanFam4.chr31                                          11518826 5 +  39901454 gggaa
i CanFam4.chr31                                         I 130 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   13851 5 +     87036 gggaa
i Canis_lupus_VD.CanFam_VD_scaffold_16982               I 130 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11265493 5 -  35597290 gggaa
i Canis_lupus_dingo.QKWQ01001993.1                      I 130 C 0
s Canis_lupus_familiaris.chr31                           11088027 5 +  39895921 gggaa
i Canis_lupus_familiaris.chr31                          I 130 C 0
s Canis_lupus_orion.HG994411.1                           16455042 5 -  44759192 gggaa
i Canis_lupus_orion.HG994411.1                          I 130 C 0
s Capra_aegagrus.CM003214.1                              21324577 5 + 157394656 gggct
i Capra_aegagrus.CM003214.1                             I 134 C 0
s Capra_hircus.CM004562.1                               135705804 5 - 157403528 gggct
i Capra_hircus.CM004562.1                               I 134 C 0
s Capromys_pilorides.CapPil_scaffold_2446099                  348 5 +       369 GGTTA
i Capromys_pilorides.CapPil_scaffold_2446099            I 130 C 0
s Carlito_syrichta.NW_007248099.1                          308430 5 +    345090 AGGCA
i Carlito_syrichta.NW_007248099.1                       I 135 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               58890 4 +     67245 g-gca
i Carollia_perspicillata.CarPer_scaffold_4436           I 135 C 0
s Castor_canadensis.CasCan_scaffold_47037                   30119 5 +     33760 GAATA
i Castor_canadensis.CasCan_scaffold_47037               I 136 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   158242 5 -    276539 GGGCC
i Catagonus_wagneri.CatWag_scaffold_1305                I 249 C 0
s Cavia_aperea.AVPZ01000278.1                            15786011 5 -  24422027 NNNNN
i Cavia_aperea.AVPZ01000278.1                           I 135 C 0
s Cavia_porcellus.DS562889.1                             15797945 5 -  24440124 gagta
i Cavia_porcellus.DS562889.1                            I 135 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       176136 5 +    436027 GAGTA
i Cavia_tschudii.CavTsc_scaffold_488                    I 135 C 0
s Cebus_albifrons.Contig22                               18890237 5 -  29618158 gggca
i Cebus_albifrons.Contig22                              I 136 C 0
s Cebus_olivaceus.k141_93739                                 7781 5 -     26817 gggca
i Cebus_olivaceus.k141_93739                            I 136 C 0
s Cebus_unicolor.k141_239009                                12021 5 +     25043 gggca
i Cebus_unicolor.k141_239009                            I 136 C 0
s Cephalopachus_bancanus.k141_702587                         7464 5 +     21754 aggca
i Cephalopachus_bancanus.k141_702587                    I 136 C 0
s Ceratotherium_simum.JH767818.1                          4363244 5 +   7569818 gggca
i Ceratotherium_simum.JH767818.1                        I 134 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         2999 5 -      9338 gggca
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    I 134 C 0
s Cercocebus_atys.KQ010443.1                              6554677 5 +   6739814 gggca
i Cercocebus_atys.KQ010443.1                            I 135 C 0
s Cercocebus_chrysogaster.k141_2328246                      26154 5 +     60454 gggca
i Cercocebus_chrysogaster.k141_2328246                  I 135 C 0
s Cercocebus_lunulatus.k141_4634644                          1359 5 -     21101 gggca
i Cercocebus_lunulatus.k141_4634644                     I 135 C 0
s Cercocebus_torquatus.k141_3969582                         58669 5 -    107033 gggca
i Cercocebus_torquatus.k141_3969582                     I 135 C 0
s Cercopithecus_ascanius.k141_4123525                        1561 5 -     17608 gggca
i Cercopithecus_ascanius.k141_4123525                   I 135 C 0
s Cercopithecus_cephus.k141_598190                          29056 5 +     30494 gggca
i Cercopithecus_cephus.k141_598190                      I 135 C 0
s Cercopithecus_diana.k141_2980617                          57902 5 -     59240 gggca
i Cercopithecus_diana.k141_2980617                      I 135 C 0
s Cercopithecus_hamlyni.k141_129805                          1603 5 +     16677 gggca
i Cercopithecus_hamlyni.k141_129805                     I 135 C 0
s Cercopithecus_lowei.k141_623764                           23761 5 +     35983 gggca
i Cercopithecus_lowei.k141_623764                       I 135 C 0
s Cercopithecus_albogularis.ctg51                              11990289 5 +  12117833 gggca
i Cercopithecus_albogularis.ctg51                             I 135 C 0
s Cercopithecus_mona.ctg12                               46477047 5 +  46592721 gggca
i Cercopithecus_mona.ctg12                              I 135 C 0
s Cercopithecus_neglectus.k141_2078027                      40598 5 -     45581 gggca
i Cercopithecus_neglectus.k141_2078027                  I 135 C 0
s Cercopithecus_nictitans.k141_1129315                       1604 5 +     35577 gggca
i Cercopithecus_nictitans.k141_1129315                  I 135 C 0
s Cercopithecus_petaurista.k141_64532                        1380 5 -     25661 gggca
i Cercopithecus_petaurista.k141_64532                   I 135 C 0
s Cercopithecus_pogonias.k141_3109732                        1358 5 -     17744 gggca
i Cercopithecus_pogonias.k141_3109732                   I 135 C 0
s Cercopithecus_roloway.k141_2263608                        20974 5 +     37128 gggca
i Cercopithecus_roloway.k141_2263608                    I 135 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           2188 5 -      6963 cagca
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      I 119 C 0
s Cheirogaleus_major.k141_1157592                           58436 5 -     68416 gggca
i Cheirogaleus_major.k141_1157592                       I 134 C 0
s Cheirogaleus_medius.k141_133808                            7479 5 +     13308 gggca
i Cheirogaleus_medius.k141_133808                       I 134 C 0
s Cheracebus_lucifer.k141_619653                             5037 5 -     18223 aggca
i Cheracebus_lucifer.k141_619653                        I 136 C 0
s Cheracebus_lugens.k141_203936                             22060 5 +     25473 aggca
i Cheracebus_lugens.k141_203936                         I 136 C 0
s Cheracebus_regulus.k141_2128895                           41095 5 +     57117 aggca
i Cheracebus_regulus.k141_2128895                       I 136 C 0
s Cheracebus_torquatus.k141_315545                          45774 5 +     54541 aggca
i Cheracebus_torquatus.k141_315545                      I 136 C 0
s Chinchilla_lanigera.JH721867.1                         15961154 5 +  43084221 gatta
i Chinchilla_lanigera.JH721867.1                        I 140 C 0
s Chiropotes_israelita.k141_1189915                         70596 5 +    196370 gtgca
i Chiropotes_israelita.k141_1189915                     I 136 C 0
s Chiropotes_sagulatus.k141_773804                          14776 5 +     40510 gtgca
i Chiropotes_sagulatus.k141_773804                      I 136 C 0
s Chlorocebus_aethiops.ctg22                             15138520 5 -  15256731 gggca
i Chlorocebus_aethiops.ctg22                            I 135 C 0
s Chlorocebus_pygerythrus.k141_1486215                      33567 5 -     53260 gggca
i Chlorocebus_pygerythrus.k141_1486215                  I 135 C 0
s Chlorocebus_sabaeus.CM001963.2                        101144131 5 + 101219884 gggca
i Chlorocebus_sabaeus.CM001963.2                        I 135 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                15867 5 -     21363 CAGCA
i Choloepus_didactylus.ChoDid_scaffold_36182            I 115 C 0
s Choloepus_hoffmanni.KN194586.1                           761174 5 +    964067 CAGCA
i Choloepus_hoffmanni.KN194586.1                        I 115 C 0
s Colobus_angolensis.KN985967.1                          10885897 5 +  10971483 GGGCA
i Colobus_angolensis.KN985967.1                         I 135 C 0
s Colobus_guereza.LG08                                  147664061 5 + 156195979 gggca
i Colobus_guereza.LG08                                  I 135 C 0
s Colobus_polykomos.k141_1406057                            16046 5 +     23629 gggca
i Colobus_polykomos.k141_1406057                        I 135 C 0
s Condylura_cristata.JH655880.1                          60612870 5 +  78930452 gagca
i Condylura_cristata.JH655880.1                         I 136 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         39062 5 -     40477 gggca
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     I 137 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 277945 5 -    399297 GATTA
i Cricetomys_gambianus.CriGam_scaffold_949              I 135 C 0
s Cricetulus_griseus.LT883672.1                          53028617 1 +  72327488 ----A
i Cricetulus_griseus.LT883672.1                         I 132 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            51379 5 -     70449 gggaa
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 135 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  207564 5 -    956709 GGGTA
i Ctenodactylus_gundi.CteGun_scaffold_447               I 127 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 30155 5 -     67205 GGGTA
i Ctenomys_sociabilis.CteSoc_scaffold_19489             I 130 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                17168 5 +     26546 GGGTA
i Cuniculus_paca.CunPac_flattened_line_16637            I 135 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             58254 5 -    236241 GGGTA
i Dasyprocta_punctata.DasPun_flattened_line_634         I 134 C 0
s Dasypus_novemcinctus.JH568778.1                          183062 5 -   6883506 cagca
i Dasypus_novemcinctus.JH568778.1                       I 156 C 0
s Daubentonia_madagascariensis.ctg11                     16844296 5 +  31942871 gggca
i Daubentonia_madagascariensis.ctg11                    I 135 C 0
s Delphinapterus_leucas.KZ290064.1                       80036204 5 -  96802777 ggtct
i Delphinapterus_leucas.KZ290064.1                      I 135 C 0
s Desmodus_rotundus.KZ672188.1                           18698185 4 -  18957592 g-gca
i Desmodus_rotundus.KZ672188.1                          I 135 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 321896 5 +    993696 ggaca
i Dicerorhinus_sumatrensis.PEKH010003161.1              I 134 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   2546 5 +    151128 gggca
i Diceros_bicornis.DicBicMic_scaffold_9545              I 134 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   156410 5 +    228994 GATTA
i Dinomys_branickii.DinBra_scaffold_1996                I 54 C 0
s Dipodomys_ordii.KN672545.1                              3655518 5 +   4240102 gggtg
i Dipodomys_ordii.KN672545.1                            I 101 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 27151 5 +     28912 GGGTC
i Dipodomys_stephensi.DipSte_scaffold_44365             I 101 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                35508 5 -     73477 gggta
i Dolichotis_patagonum.DolPat_scaffold_14102            I 135 C 0
s Echinops_telfairi.JH980316.1                           22994614 5 -  44670279 TGGTA
i Echinops_telfairi.JH980316.1                          I 422 C 0
s Eidolon_helvum.KE772537.1                                 11592 5 +     24177 gggca
i Eidolon_helvum.KE772537.1                             I 138 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1490852 5 +   1727528 GGGCT
i Elaphurus_davidianus.JRFZ01086400.1                   I 134 C 0
s Ellobius_lutescens.LOEQ01003611.1                        239177 5 -    369425 CAGTA
i Ellobius_lutescens.LOEQ01003611.1                     I 133 C 0
s Ellobius_talpinus.LOJH01090055.1                           6292 5 -      7838 CAGTA
i Ellobius_talpinus.LOJH01090055.1                      I 135 C 0
s Enhydra_lutris.KZ291749.1                              85871527 5 +  99434291 gggaa
i Enhydra_lutris.KZ291749.1                             I 117 C 0
s Eptesicus_fuscus.JH977687.1                             4703573 5 +   6522550 gggca
i Eptesicus_fuscus.JH977687.1                           I 128 C 0
s Equus_asinus.JREZ01000062.1                             5852296 5 -   7175178 gggca
i Equus_asinus.JREZ01000062.1                           I 131 C 0
s Equus_caballus.CM000402.2                              13350799 5 +  41866177 gggca
i Equus_caballus.CM000402.2                             I 131 C 0
s Equus_przewalskii.ATBW01073585.1                          12289 5 +     92910 gggca
i Equus_przewalskii.ATBW01073585.1                      I 131 C 0
s Erythrocebus_patas.Contig8                             48770698 5 -  48907691 gggca
i Erythrocebus_patas.Contig8                            I 135 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          314410 5 +    330699 ggact
i Eschrichtius_robustus.EscRob_flattened_line_685       I 135 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             60864 5 +     89355 ggact
i Eubalaena_japonica.EubJap_flattened_line_7756         I 135 C 0
s Eulemur_albifrons.k141_715837                              4482 5 +     13586 gggca
i Eulemur_albifrons.k141_715837                         I 135 C 0
s Eulemur_collaris.k141_311830                               4419 5 -      6809 gggca
i Eulemur_collaris.k141_311830                          I 135 C 0
s Eulemur_coronatus.k141_3240342                            10892 5 +     36558 gggca
i Eulemur_coronatus.k141_3240342                        I 135 C 0
s Eulemur_flavifrons.k141_903901                             7211 5 +     60246 gggca
i Eulemur_flavifrons.k141_903901                        I 135 C 0
s Eulemur_fulvus.k141_653297                                10690 5 +    109717 gggca
i Eulemur_fulvus.k141_653297                            I 135 C 0
s Eulemur_macaco.k141_1341545                               15073 5 +     16540 gggca
i Eulemur_macaco.k141_1341545                           I 135 C 0
s Eulemur_mongoz.k141_825972                                15346 5 +     27497 gggca
i Eulemur_mongoz.k141_825972                            I 135 C 0
s Eulemur_rubriventer.k141_411740                           17803 5 +     26808 gggca
i Eulemur_rubriventer.k141_411740                       I 135 C 0
s Eulemur_rufus.k141_1620292                                32538 5 +     46535 gggca
i Eulemur_rufus.k141_1620292                            I 135 C 0
s Eulemur_sanfordi.k141_186399                              15260 5 -     29447 gggca
i Eulemur_sanfordi.k141_186399                          I 135 C 0
s Felis_catus.CM001386.2                                129892339 5 - 159252932 ggaaa
i Felis_catus.CM001386.2                                I 130 C 0
s Felis_catus_fca126.CM031420.1                         129279408 5 - 158578461 ggaaa
i Felis_catus_fca126.CM031420.1                         I 130 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 20553 5 +     52776 ggaaa
i Felis_nigripes.FelNig_flattened_line_8080             I 130 C 0
s Galago_moholi.ctg555                                     210220 5 -    847004 gagca
i Galago_moholi.ctg555                                  I 70 C 0
s Galago_senegalensis.k141_964197                           12599 5 -     43889 gagca
i Galago_senegalensis.k141_964197                       I 70 C 0
s Galagoides_demidoff.k141_1769638                           9676 5 +     27357 ggaca
i Galagoides_demidoff.k141_1769638                      I 79 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               155699 5 +    324696 gggca
i Galeopterus_variegatus.GalVar_scaffold_354            I 135 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    180649 5 -    189561 gggct
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 141 C 0
s Glis_glis.GliGli_scaffold_79770                           12477 5 -     18683 gtgta
i Glis_glis.GliGli_scaffold_79770                       I 99 C 0
s Gorilla_beringei.k141_111300                               4763 5 -     14630 gggca
i Gorilla_beringei.k141_111300                          I 135 C 0
s Gorilla_gorilla.LT578340.1                            119651862 5 - 195582420 gggca
i Gorilla_gorilla.LT578340.1                            I 135 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   77021 5 +    118900 gtgta
i Graphiurus_murinus.GraMur_scaffold_4493               I 135 C 0
s Hapalemur_alaotrensis.k141_1280836                         1276 5 +     10286 gggca
i Hapalemur_alaotrensis.k141_1280836                    I 135 C 0
s Hapalemur_gilberti.k141_1254239                            9452 5 +      9690 gggca
i Hapalemur_gilberti.k141_1254239                       I 135 C 0
s Hapalemur_griseus.k141_1387522                             5082 5 +     56096 gggca
i Hapalemur_griseus.k141_1387522                        I 135 C 0
s Hapalemur_meridionalis.k141_186231                        28332 5 -     42470 gggca
i Hapalemur_meridionalis.k141_186231                    I 135 C 0
s Hapalemur_occidentalis.k141_797938                        44955 5 -     54384 gggca
i Hapalemur_occidentalis.k141_797938                    I 135 C 0
s Helogale_parvula.HelPar_flattened_line_22962              16585 5 +     53719 ggaaa
i Helogale_parvula.HelPar_flattened_line_22962          I 135 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                26849 5 -     91191 GGGCT
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 134 C 0
s Heterocephalus_glaber.JH602058.1                        2550497 5 +  31725842 gggca
i Heterocephalus_glaber.JH602058.1                      I 140 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               56888 5 +     73687 cagca
i Heterohyrax_brucei.HetBruBak_scaffold_25354           I 135 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              146486 5 +    277961 gggtt
i Hippopotamus_amphibius.HipAmp_scaffold_1308           I 135 C 0
s Hipposideros_armiger.JXIK01001085.1                      277775 5 -    477199 ggcca
i Hipposideros_armiger.JXIK01001085.1                   I 134 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              6927 5 -      9143 ggcca
i Hipposideros_galeritus.HipGal_scaffold_104691         I 134 C 0
s Hoolock_leuconedys.ctg79                                      4169 5 -   7690867 gggca
i Hoolock_leuconedys.ctg79                                 I 161 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 16669 5 -     67322 ggaaa
i Hyaena_hyaena.HyaHya_flattened_line_20729             I 134 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           18387 5 -    119109 GGGTA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       I 135 C 0
s Hylobates_abbotti.k141_493872                              4595 5 +      5897 gggca
i Hylobates_abbotti.k141_493872                         I 135 C 0
s Hylobates_agilis.k141_624065                               1459 5 +      2112 gggca
i Hylobates_agilis.k141_624065                          I 135 C 0
s Hylobates_klossii.k141_466549                             11035 5 +     11537 gggca
i Hylobates_klossii.k141_466549                         I 135 C 0
s Hylobates_pileatus_b.ContigUN                                 14624140 5 -  25970782 gggca
i Hylobates_pileatus_b.ContigUN                                I 135 C 0
s Hylobates_muelleri.k141_1389047                            1396 5 -      2977 gggca
i Hylobates_muelleri.k141_1389047                       I 135 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     5555 5 +     22540 GGGTA
i Hystrix_cristata.HysCri_scaffold_50788                I 135 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7125278 5 +  13083262 tggta
i Ictidomys_tridecemlineatus.JH393315.1                 I 131 C 0
s Indri_indri.k141_4418183                                    902 5 -      1457 gggca
i Indri_indri.k141_4418183                              I 135 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               8404 5 +     17520 gggct
i Inia_geoffrensis.IniGeo_flattened_line_66725          I 135 C 0
s Jaculus_jaculus.JH725517.1                              8565158 5 +  11848649 GGACA
i Jaculus_jaculus.JH725517.1                            I 130 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               23020 5 +     37189 gggct
i Kogia_breviceps.KogBre_flattened_line_35920           I 131 C 0
s Lagothrix_lagothricha.k141_12968                          49617 5 -    147782 gggca
i Lagothrix_lagothricha.k141_12968                      I 136 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   113659 5 -    115756 gggca
i Lasiurus_borealis.LasBor_scaffold_5102                I 117 C 0
s Lemur_catta.scaffold_1                                258406636 5 - 285822530 gggca
i Lemur_catta.scaffold_1                                I 135 C 0
s Lepilemur_ankaranensis.k141_884009                        23392 5 +     39228 gggca
i Lepilemur_ankaranensis.k141_884009                    I 135 C 0
s Lepilemur_dorsalis.k141_134267                            52767 5 +     63517 gggca
i Lepilemur_dorsalis.k141_134267                        I 135 C 0
s Lepilemur_ruficaudatus.k141_617879                        78017 5 +    116806 gggca
i Lepilemur_ruficaudatus.k141_617879                    I 135 C 0
s Lepilemur_septentrionalis.k141_578524                     31031 5 -     33031 gggca
i Lepilemur_septentrionalis.k141_578524                 I 135 C 0
s Leptonychotes_weddellii.KB714749.1                      3085342 5 -   3498232 gggaa
i Leptonychotes_weddellii.KB714749.1                    I 131 C 0
s Lepus_americanus.LepAme_scaffold_62849                    12671 5 +     22452 GGACA
i Lepus_americanus.LepAme_scaffold_62849                I 422 C 0
s Lipotes_vexillifer.KE558548.1                            135357 5 +   3060487 gggct
i Lipotes_vexillifer.KE558548.1                         I 135 C 0
s Lophocebus_aterrimus.ctg55                             19247766 5 +  19376315 gggca
i Lophocebus_aterrimus.ctg55                            I 135 C 0
s Loris_lydekkerianus.k141_550999                            9991 5 +     84689 gggca
i Loris_lydekkerianus.k141_550999                       I 79 C 0
s Loris_tardigradus.ctg97                                 3777740 5 +   6799190 gggca
i Loris_tardigradus.ctg97                               I 79 C 0
s Loxodonta_africana.GL010040.1                          20591484 5 -  62548349 tggca
i Loxodonta_africana.GL010040.1                         I 135 C 0
s Lycaon_pictus.CM007556.1                               11087483 5 +  39895028 gggaa
i Lycaon_pictus.CM007556.1                              I 130 C 0
s Macaca_arctoides.k141_2201161                             19506 5 +     74745 gggca
i Macaca_arctoides.k141_2201161                         I 135 C 0
s Macaca_assamensis.Contig65                             12705962 5 +  12821369 gggca
i Macaca_assamensis.Contig65                            I 135 C 0
s Macaca_cyclopis.k119_893486                                1607 5 -      3136 gggca
i Macaca_cyclopis.k119_893486                           I 135 C 0
s Macaca_fascicularis.k141_155037                           46424 5 +     63263 gggca
i Macaca_fascicularis.k141_155037                       I 135 C 0
s Macaca_fuscata.k119_599327                                 1127 5 -      2568 gggca
i Macaca_fuscata.k119_599327                            I 135 C 0
s Macaca_leonina.k141_467472                                 1713 5 -      7381 gggca
i Macaca_leonina.k141_467472                            I 135 C 0
s Macaca_maura.k141_251854                                  44931 5 -     79256 gggca
i Macaca_maura.k141_251854                              I 135 C 0
s Macaca_mulatta.NC_041755.1                            196035039 5 + 196197964 gggca
i Macaca_mulatta.NC_041755.1                            I 135 C 0
s Macaca_nemestrina.KQ004885.1                           11445207 5 +  11645122 GGTCA
i Macaca_nemestrina.KQ004885.1                          I 135 C 0
s Macaca_nigra.k141_282495                                   3878 5 -     46448 gggca
i Macaca_nigra.k141_282495                              I 135 C 0
s Macaca_radiata.k141_3680256                                1550 5 -     13212 gggca
i Macaca_radiata.k141_3680256                           I 135 C 0
s Macaca_siberu.k141_741907                                 15231 5 -     55006 ggtca
i Macaca_siberu.k141_741907                             I 135 C 0
s Macaca_silenus.Contig12                                43840348 5 +  43892939 gggca
i Macaca_silenus.Contig12                               I 135 C 0
s Macaca_thibetana.k99_662710                               16517 5 -     24607 gggca
i Macaca_thibetana.k99_662710                           I 135 C 0
s Macaca_tonkeana.k141_2870633                               3883 5 -     27140 gggca
i Macaca_tonkeana.k141_2870633                          I 135 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                700965 5 +    802869 gggca
i Macroglossus_sobrinus.MacSob_scaffold_879             I 133 C 0
s Mandrillus_leucophaeus.scaffold125                     43436925 5 -  43563597 gggca
i Mandrillus_leucophaeus.scaffold125                    I 135 C 0
s Mandrillus_sphinx.Contig144                             4449751 5 -   4543643 gggca
i Mandrillus_sphinx.Contig144                           I 135 C 0
s Manis_javanica.JSZB01003966.1                            145027 5 +    252755 tggaa
i Manis_javanica.JSZB01003966.1                         I 87 C 0
s Manis_pentadactyla.KN017078.1                             35102 5 +     58827 tggaa
i Manis_pentadactyla.KN017078.1                         I 87 C 0
s Marmota_marmota.CZRN01000005.1                         36873116 5 +  64221397 tggta
i Marmota_marmota.CZRN01000005.1                        I 131 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       63782 5 -    234502 gagca
i Megaderma_lyra.MegLyr_scaffold_3562                   I 135 C 0
s Mellivora_capensis.MelCap_flattened_line_15433              341 5 -     87323 ggaaa
i Mellivora_capensis.MelCap_flattened_line_15433        I 117 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               12132 5 +     15977 GAATA
i Meriones_unguiculatus.MerUng_scaffold_52233           I 139 C 0
s Mesocricetus_auratus.KB708139.1                         1046326 1 -  26018355 ----A
i Mesocricetus_auratus.KB708139.1                       I 132 C 0
s Microcebus_murinus.CM007691.1                          16509646 5 +  47401472 gggCA
i Microcebus_murinus.CM007691.1                         I 135 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  31047 5 -     48017 CGATA
i Microgale_talazaci.MicTal_scaffold_34660              I 409 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               22074 4 -     32043 g-gca
i Micronycteris_hirsuta.MicHir_scaffold_37978           I 135 C 0
s Microtus_ochrogaster.CM001673.1                        22819472 5 -  98408828 CAGTA
i Microtus_ochrogaster.CM001673.1                       I 135 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8209070 5 +  10048721 gggca
i Miniopterus_natalensis.LDJU01000022.1                 I 135 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            33722 5 +     45743 gggca
i Miniopterus_schreibersii.MinSch_scaffold_24116        I 135 C 0
s Miopithecus_ogouensis.k141_2935907                         1478 5 +     29742 gggca
i Miopithecus_ogouensis.k141_2935907                    I 135 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        10855 5 -    104932 gggaa
i Mirounga_angustirostris.MirAng_flattened_line_8852    I 131 C 0
s Mirza_zaza.k141_226143                                     5036 5 +      8497 gggca
i Mirza_zaza.k141_226143                                I 135 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 145792 5 +    154973 ggtct
i Monodon_monoceros.MonMon_M_scaffold_5598              I 135 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                160585 4 +    265003 g-gta
i Mormoops_blainvillei.MorMeg_scaffold_2952             I 135 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                   395 5 -     19904 GGGCT
i Moschus_moschiferus.MosMos_scaffold_78805             N 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  144281 5 -    168139 agaaa
i Mungos_mungo.MunMun_flattened_line_8729               I 135 C 0
s Murina_feae.MurFea_scaffold_2254                          18943 5 -    100666 gggca
i Murina_feae.MurFea_scaffold_2254                      I 135 C 0
s Mus_caroli.LT608236.1                                  70765981 5 +  92629107 gagta
i Mus_caroli.LT608236.1                                 I 131 C 0
s Mus_musculus.chr16                                     75489043 5 +  98207768 gagta
i Mus_musculus.chr16                                    I 129 C 0
s Mus_pahari.LT608305.1                                  67555266 5 +  89017189 gagta
i Mus_pahari.LT608305.1                                 I 131 C 0
s Mus_spretus.CM004110.1                                 74330221 5 +  97876770 gagta
i Mus_spretus.CM004110.1                                I 131 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             11046 5 +     98495 GTATA
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 135 C 0
s Mustela_putorius.JH417978.1                             4423706 5 -  28371801 gggaa
i Mustela_putorius.JH417978.1                           I 117 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     89437 5 -    117718 GGGTA
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 129 C 0
s Myotis_brandtii.KE161952.1                               967236 5 +   8389877 gggca
i Myotis_brandtii.KE161952.1                            I 135 C 0
s Myotis_davidii.KB114863.1                               5018912 5 +   6462685 gggca
i Myotis_davidii.KB114863.1                             I 135 C 0
s Myotis_lucifugus.GL429887.1                             3464816 5 -   3747815 gggca
i Myotis_lucifugus.GL429887.1                           I 135 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        10031 5 +     66751 gggca
i Myotis_myotis.MyoMyo_scaffold_6123                    I 135 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             4440 5 -      8794 caaca
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        I 133 C 0
s Nannospalax_galili.KL201303.1                            117838 5 +    362372 gagta
i Nannospalax_galili.KL201303.1                         I 140 C 0
s Nasalis_larvatus.k141_153429                               7979 5 +     48152 gggca
i Nasalis_larvatus.k141_153429                          I 134 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4484247 5 -  14209539 gggaa
i Neomonachus_schauinslandi.NINY01007774.1              I 131 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3950407 5 -   4490290 ggtct
i Neophocaena_asiaeorientalis.KZ688543.1                I 135 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  48687 5 +     94413 gtgca
i Noctilio_leporinus.NocLep_scaffold_12062              I 135 C 0
s Nomascus_annamensis.k141_302224                            1437 5 +      1516 gggca
i Nomascus_annamensis.k141_302224                       I 135 C 0
s Nomascus_concolor.k141_226614                               697 5 -      5092 gggca
i Nomascus_concolor.k141_226614                         I 135 C 0
s Nomascus_gabriellae.k141_642452                            1480 5 +      2851 gggca
i Nomascus_gabriellae.k141_642452                       I 135 C 0
s Nomascus_siki_b.tarseq_80                             24415 5 -  18771707 gggca
i Nomascus_siki_b.tarseq_80                         I 135 C 0
s Nomascus_siki_a.k141_595747                                  2118 5 +      4512 gggca
i Nomascus_siki_a.k141_595747                             I 135 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                30288 5 +   3668941 gggaa
i Nyctereutes_procyonoides.CAJHUB010000786.1            I 130 C 0
s Nycticebus_bengalensis.LG16                            65566425 5 -  95554990 gggca
i Nycticebus_bengalensis.LG16                           I 79 C 0
s Nycticebus_coucang.k141_2051882                            3154 5 +      6470 gggca
i Nycticebus_coucang.k141_2051882                       I 79 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65668763 5 +  89412551 gggca
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     I 79 C 0
s Ochotona_princeps.JH802095.1                            4995461 5 -  23139505 CAACA
i Ochotona_princeps.JH802095.1                          I 126 C 0
s Octodon_degus.JH651621.1                                3684979 5 +  10294119 tggta
i Octodon_degus.JH651621.1                              I 130 C 0
s Odobenus_rosmarus.KB229587.1                            1048365 5 +   1475581 gggaa
i Odobenus_rosmarus.KB229587.1                          I 131 C 0
s Odocoileus_virginianus.KZ101650.1                       1079083 5 +   1425656 gggct
i Odocoileus_virginianus.KZ101650.1                     I 134 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         36377 5 +     78940 gggct
i Okapia_johnstoni.LVCL01S0017931.1                     I 134 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  124729 5 +    145789 GAGTA
i Ondatra_zibethicus.OndZib_scaffold_6821               I 135 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  36528 5 +     62360 GAGTA
i Onychomys_torridus.OnyTor_scaffold_12578              I 133 C 0
s Orcinus_orca.KB316965.1                                 7224089 5 -   7562323 gggct
i Orcinus_orca.KB316965.1                               I 135 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              43394 5 -     66828 TGGCA
i Orycteropus_afer.OryAfe_flattened_line_13509          I 16 C 0
s Oryctolagus_cuniculus.CM000803.1                      141875713 5 + 163896628 gggca
i Oryctolagus_cuniculus.CM000803.1                      I 443 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      307569 5 -    505867 gggaa
i Otocyon_megalotis.JAEUCK010005121.1                   I 130 C 0
s Otolemur_crassicaudatus.k141_321880                       38325 5 +     38679 gagca
i Otolemur_crassicaudatus.k141_321880                   I 79 C 0
s Otolemur_garnettii.GL873528.1                          18007752 5 -  38779656 gAGCA
i Otolemur_garnettii.GL873528.1                         I 78 C 0
s Ovis_aries.CM001582.2                                 134076643 5 - 275406953 gggct
i Ovis_aries.CM001582.2                                 I 134 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      77857 5 +    140051 GGGCT
i Ovis_canadensis.OviCan_scaffold_6251                  I 134 C 0
s Pan_paniscus.CM003386.1                               127574123 5 - 205426864 gGGCA
i Pan_paniscus.CM003386.1                               I 161 C 0
s Pan_troglodytes.CM009241.2                            120151276 5 - 196562556 gggCA
i Pan_troglodytes.CM009241.2                            I 161 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  33721 5 +    295523 ggaaa
i Panthera_onca.PanOnc_flattened_line_1615              I 130 C 0
s Panthera_pardus.KV860323.1                              3637457 5 +  18214204 ggaaa
i Panthera_pardus.KV860323.1                            I 130 C 0
s Panthera_tigris.KE721879.1                              5027116 5 -   6340057 ggaaa
i Panthera_tigris.KE721879.1                            I 130 C 0
s Pantholops_hodgsonii.KE114631.1                         1065503 5 -   1292953 GGGCT
i Pantholops_hodgsonii.KE114631.1                       I 133 C 0
s Papio_anubis.CM001492.2                               188155716 5 - 188283584 gggca
i Papio_anubis.CM001492.2                               I 135 C 0
s Papio_cynocephalus.k141_883042                             4033 5 +      5367 gggca
i Papio_cynocephalus.k141_883042                        I 135 C 0
s Papio_hamadryas.Contig15                               47513104 5 +  47705337 gggca
i Papio_hamadryas.Contig15                              I 135 C 0
s Papio_kindae.k141_5458022                                 67082 5 -    104429 gggca
i Papio_kindae.k141_5458022                             I 135 C 0
s Papio_papio.k141_979496                                    5614 5 +     14967 gggca
i Papio_papio.k141_979496                               I 135 C 0
s Papio_ursinus.k141_1345919                                 1475 5 -      7628 gggca
i Papio_ursinus.k141_1345919                            I 135 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    115155 5 -    135482 ggaaa
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 I 136 C 0
s Perodicticus_ibeanus.k141_117958                           4740 5 -     23713 gggca
i Perodicticus_ibeanus.k141_117958                      I 79 C 0
s Perodicticus_potto.k141_713187                            24049 5 -     27972 gggca
i Perodicticus_potto.k141_713187                        I 79 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      43023 5 -     45160 AGGTC
i Perognathus_longimembris.PerPac_flattened_line_22291  I 133 C 0
s Peromyscus_maniculatus.KI615518.1                       4949764 5 -   8017169 gagta
i Peromyscus_maniculatus.KI615518.1                     I 137 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    11905 5 -     36578 GGGTA
i Petromus_typicus.PetTyp_scaffold_33007                I 121 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            120696 5 -    122454 ggtct
i Phocoena_phocoena.PhoPho_flattened_line_11948         I 125 C 0
s Piliocolobus_badius.k141_1987485                           1498 5 -      5908 gggca
i Piliocolobus_badius.k141_1987485                      I 131 C 0
s Piliocolobus_gordonorum.k141_1270531                       2122 5 -     17985 gggca
i Piliocolobus_gordonorum.k141_1270531                  I 135 C 0
s Piliocolobus_kirkii.k141_929665                            1489 5 +      7694 gggca
i Piliocolobus_kirkii.k141_929665                       I 135 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26739967 5 +  26888534 GGGCA
i Piliocolobus_tephrosceles.PDMG02000036.1              I 135 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            96874 5 +    112873 aggca
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        I 128 C 0
s Pithecia_albicans.k141_991845                             43099 5 -     61926 gggca
i Pithecia_albicans.k141_991845                         I 136 C 0
s Pithecia_chrysocephala.k141_159118                        24530 5 +     78826 gggca
i Pithecia_chrysocephala.k141_159118                    I 136 C 0
s Pithecia_hirsuta.k141_1152968                              8479 5 -     15800 gggca
i Pithecia_hirsuta.k141_1152968                         I 136 C 0
s Pithecia_mittermeieri.k141_2119203                        11677 5 -     16101 gggca
i Pithecia_mittermeieri.k141_2119203                    I 136 C 0
s Pithecia_pissinattii.k141_1102319                          4986 5 +      9673 gggca
i Pithecia_pissinattii.k141_1102319                     I 136 C 0
s Pithecia_pithecia.tarseq_313                           13473982 5 -  19735023 gggca
i Pithecia_pithecia.tarseq_313                          I 136 C 0
s Pithecia_vanzolinii.k141_831006                           12888 5 -     31692 gggca
i Pithecia_vanzolinii.k141_831006                       I 136 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           4776 5 +     21690 gggct
i Platanista_gangetica.PlaMin_flattened_line_72990      I 135 C 0
s Plecturocebus_bernhardi.k141_959214                       22321 5 +     44506 aggca
i Plecturocebus_bernhardi.k141_959214                   I 136 C 0
s Plecturocebus_brunneus.k141_498086                        22533 5 +     67491 AGGCA
i Plecturocebus_brunneus.k141_498086                    I 136 C 0
s Plecturocebus_caligatus.k141_2539816                      12772 5 -     98129 AGGCA
i Plecturocebus_caligatus.k141_2539816                  I 136 C 0
s Plecturocebus_cinerascens.k141_744510                     22372 5 +    147771 aggca
i Plecturocebus_cinerascens.k141_744510                 I 136 C 0
s Plecturocebus_cupreus.k141_1223294                        22627 5 -     23762 aggca
i Plecturocebus_cupreus.k141_1223294                    I 136 C 0
s Plecturocebus_dubius.k141_3565563                          3093 5 -     55515 AGGCA
i Plecturocebus_dubius.k141_3565563                     I 136 C 0
s Plecturocebus_grovesi.k141_242819                         22446 5 +    152463 aggca
i Plecturocebus_grovesi.k141_242819                     I 136 C 0
s Plecturocebus_hoffmannsi.k141_985533                        163 5 -    119457 aggca
i Plecturocebus_hoffmannsi.k141_985533                  I 136 C 0
s Plecturocebus_miltoni.k141_841561                         12168 5 +    134592 aggca
i Plecturocebus_miltoni.k141_841561                     I 136 C 0
s Plecturocebus_moloch.k141_890597                          22756 5 -     75465 aggca
i Plecturocebus_moloch.k141_890597                      I 136 C 0
s Pongo_abelii.NDHI03003816.1                              186648 5 -    373494 GCGCA
i Pongo_abelii.NDHI03003816.1                           I 135 C 0
s Pongo_pygmaeus.ctg62                                   19807296 5 +  19899266 gcgca
i Pongo_pygmaeus.ctg62                                  I 135 C 0
s Presbytis_comata.k141_672698                               5224 5 -     15069 gggca
i Presbytis_comata.k141_672698                          I 135 C 0
s Presbytis_mitrata.k141_860013                              5358 5 +     14865 gggca
i Presbytis_mitrata.k141_860013                         I 135 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                76752 5 +     78963 cagca
i Procavia_capensis.ProCapCap_scaffold_15315            I 135 C 0
s Prolemur_simus.MPIZ01000048.1                           6848017 5 +  12164890 gggca
i Prolemur_simus.MPIZ01000048.1                         I 135 C 0
s Propithecus_coquerelli.NW_012147997.1                    667242 5 -   2312742 gggca
i Propithecus_coquerelli.NW_012147997.1                 I 135 C 0
s Propithecus_coronatus.k141_1353159                         3069 5 +     11805 GGGCA
i Propithecus_coronatus.k141_1353159                    I 135 C 0
s Propithecus_diadema.k141_577245                           42406 5 +     52369 GGGCA
i Propithecus_diadema.k141_577245                       I 135 C 0
s Propithecus_edwardsi.k141_1317105                         34794 5 -     44753 GGGCA
i Propithecus_edwardsi.k141_1317105                     I 135 C 0
s Propithecus_perrieri.k141_7554                            16716 5 +     27322 GGGCA
i Propithecus_perrieri.k141_7554                        I 135 C 0
s Propithecus_tattersalli.k141_907138                       16351 5 -     53241 GGGCA
i Propithecus_tattersalli.k141_907138                   I 135 C 0
s Propithecus_verreauxi.k141_158021                         38623 5 -     48185 GGGCA
i Propithecus_verreauxi.k141_158021                     I 135 C 0
s Psammomys_obesus.NESX01026517.1                           33686 5 +     77221 GAATA
i Psammomys_obesus.NESX01026517.1                       I 139 C 0
s Pteronotus_parnellii.KE867983.1                            3243 4 -     27784 g-gca
i Pteronotus_parnellii.KE867983.1                       I 135 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        246015 5 -    344369 gggga
i Pteronura_brasiliensis.PteBra_flattened_line_1343     I 117 C 0
s Pteropus_alecto.KB031157.1                             13245357 5 -  17261082 gggca
i Pteropus_alecto.KB031157.1                            I 135 C 0
s Pteropus_vampyrus.KN525959.1                             603307 5 -   3946241 gggca
i Pteropus_vampyrus.KN525959.1                          I 135 C 0
s Puma_concolor.QAVW01000427.1                          131533701 5 - 161321710 ggaaa
i Puma_concolor.QAVW01000427.1                          I 130 C 0
s Pygathrix_cinerea.k141_374971                             29342 5 +     56732 gggca
i Pygathrix_cinerea.k141_374971                         I 135 C 0
s Pygathrix_nigripes_b.ctg79                                 6805833 5 +   6970761 gggca
i Pygathrix_nigripes_b.ctg79                               I 135 C 0
s Pygathrix_nigripes_a.k141_101123                             5227 5 +     18040 gggca
i Pygathrix_nigripes_a.k141_101123                        I 135 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                15160 5 +     68503 GGGCT
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 134 C 0
s Rattus_norvegicus.chr11                                13914939 5 +  90463843 gaaca
i Rattus_norvegicus.chr11                               I 135 I 52
s Rhinolophus_sinicus.LVEH01000179.1                      1787184 5 +   2252614 gtccc
i Rhinolophus_sinicus.LVEH01000179.1                    I 135 C 0
s Rhinopithecus_bieti.k119_1391695                           1455 5 -      1866 gggca
i Rhinopithecus_bieti.k119_1391695                      I 135 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206377112 5 - 206558726 GGGCA
i Rhinopithecus_roxellana.NC_044549.1                   I 135 C 0
s Rhinopithecus_strykeri.ctg4                            44856012 5 -  45163003 gggca
i Rhinopithecus_strykeri.ctg4                           I 135 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                18671 5 +    109198 gggca
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            I 135 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       7323 5 +     12214 GGGCT
i Saiga_tatarica.SaiTat_scaffold_82192                  I 134 C 0
s Saimiri_boliviensis.NW_024100938.1                     15672187 5 -  43202129 GGGCA
i Saimiri_boliviensis.NW_024100938.1                    I 136 C 0
s Saimiri_cassiquiarensis.k141_808270                        4104 5 +     34089 gggca
i Saimiri_cassiquiarensis.k141_808270                   I 136 C 0
s Saimiri_macrodon.k141_2087127                              4045 5 -     60842 gggca
i Saimiri_macrodon.k141_2087127                         I 136 C 0
s Saimiri_oerstedii.k141_841116                              4140 5 +     67014 gggca
i Saimiri_oerstedii.k141_841116                         I 136 C 0
s Saimiri_sciureus.k141_1947592                              4118 5 +     60816 gggca
i Saimiri_sciureus.k141_1947592                         I 136 C 0
s Saimiri_ustus.k141_1282476                                 4055 5 -     76454 gggca
i Saimiri_ustus.k141_1282476                            I 136 C 0
s Sapajus_apella.ctg10                                   17340780 5 -  30362882 gggca
i Sapajus_apella.ctg10                                  I 136 C 0
s Sapajus_macrocephalus.k141_966464                         20139 5 -     62485 gggca
i Sapajus_macrocephalus.k141_966464                     I 136 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   31669 5 -    114521 gggca
i Scalopus_aquaticus.ScaAqu_scaffold_9300               I 132 C 0
s Semnopithecus_entellus.k141_1572367                        2839 5 +     15331 gggca
i Semnopithecus_entellus.k141_1572367                   I 135 C 0
s Semnopithecus_hypoleucos.k141_761524                       8236 5 +     20762 gggca
i Semnopithecus_hypoleucos.k141_761524                  I 135 C 0
s Semnopithecus_johnii.k141_785014                         118238 5 +    130994 gggga
i Semnopithecus_johnii.k141_785014                      I 135 C 0
s Semnopithecus_priam.k141_410937                           37025 5 +     46263 gggca
i Semnopithecus_priam.k141_410937                       I 135 C 0
s Semnopithecus_schistaceus.k141_387461                     30139 5 +     42640 gggca
i Semnopithecus_schistaceus.k141_387461                 I 135 C 0
s Semnopithecus_vetulus.k141_1143185                        13183 5 +     30600 gggca
i Semnopithecus_vetulus.k141_1143185                    I 135 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   99722 5 -    120886 GAGTA
i Sigmodon_hispidus.SigHis_scaffold_11332               I 131 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            18244 5 +    739146 gaaca
i Solenodon_paradoxus.SolPar_flattened_line_1012        I 135 C 0
s Spermophilus_dauricus.KZ294190.1                        2239196 5 +   2842873 tggta
i Spermophilus_dauricus.KZ294190.1                      I 131 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             234136 5 -    276980 gggaa
i Spilogale_gracilis.SpiGra_flattened_line_905          I 117 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            26963 5 +     62062 ggaaa
i Suricata_suricatta.SurSur_flattened_line_20339        I 153 C 0
s Sus_scrofa.CM000824.4                                 189271233 5 + 218635234 ggacc
i Sus_scrofa.CM000824.4                                 I 148 C 0
s Symphalangus_syndactylus.tarseq_24                        14397 5 -  13920577 gggca
i Symphalangus_syndactylus.tarseq_24                    I 135 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               5412 5 -      6213 gggca
i Tadarida_brasiliensis.TadBra_scaffold_145589          I 134 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               14114 5 +     45698 CAACG
i Tamandua_tetradactyla.TamTet_scaffold_26877           I 131 C 0
s Tapirus_indicus.TapInd_scaffold_176                      806255 5 +   1148477 gaaca
i Tapirus_indicus.TapInd_scaffold_176                   I 122 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  56946 5 +     99546 gaaca
i Tapirus_terrestris.TapTer_scaffold_14939              I 122 C 0
s Tarsius_lariang.k141_609102                               25912 5 +     42269 aggca
i Tarsius_lariang.k141_609102                           I 132 C 0
s Tarsius_wallacei.k141_48636                               59228 5 +     65473 aggca
i Tarsius_wallacei.k141_48636                           I 132 C 0
s Theropithecus_gelada.CM009951.1                       194007243 5 - 194193292 gggca
i Theropithecus_gelada.CM009951.1                       I 135 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             38725 5 -     47444 GGGCA
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         I 125 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  4936 5 +      6782 cagca
i Tolypeutes_matacus.TolMat_scaffold_269431             I 119 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  135245 4 -    259118 g-gtg
i Tonatia_saurophila.TonSau_scaffold_3334               I 135 C 0
s Trachypithecus_auratus.k141_738098                        26343 5 +     38948 gggca
i Trachypithecus_auratus.k141_738098                    I 132 C 0
s Trachypithecus_crepusculus.k141_1588528                   20073 5 -     32910 gggca
i Trachypithecus_crepusculus.k141_1588528               I 135 C 0
s Trachypithecus_cristatus.k141_1011511                      1460 5 -     12939 gggca
i Trachypithecus_cristatus.k141_1011511                 I 135 C 0
s Trachypithecus_francoisi.k141_768164                       1395 5 -     14244 gggca
i Trachypithecus_francoisi.k141_768164                  I 135 C 0
s Trachypithecus_geei.k141_670367                           42793 5 -     54611 gggca
i Trachypithecus_geei.k141_670367                       I 135 C 0
s Trachypithecus_germaini.k141_868450                         599 5 -     11566 gggca
i Trachypithecus_germaini.k141_868450                   I 135 C 0
s Trachypithecus_hatinhensis.k141_504423                     2771 5 -     15592 gggca
i Trachypithecus_hatinhensis.k141_504423                I 135 C 0
s Trachypithecus_laotum.k141_760702                          1428 5 +     14371 gggca
i Trachypithecus_laotum.k141_760702                     I 135 C 0
s Trachypithecus_leucocephalus.k141_283605                  51180 5 +     51589 gggca
i Trachypithecus_leucocephalus.k141_283605              I 135 C 0
s Trachypithecus_melamera.k141_238507                       14361 5 +     14732 gggca
i Trachypithecus_melamera.k141_238507                   I 135 C 0
s Trachypithecus_obscurus.k141_1115109                       4833 5 -     28054 gggca
i Trachypithecus_obscurus.k141_1115109                  I 135 C 0
s Trachypithecus_phayrei.ctg3                            44659633 5 -  44834318 gggca
i Trachypithecus_phayrei.ctg3                           I 135 C 0
s Trachypithecus_pileatus.k141_1022309                       1936 5 +     13828 gggca
i Trachypithecus_pileatus.k141_1022309                  I 135 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   4539 5 +     90398 GGGCT
i Tragulus_javanicus.TraJav_scaffold_14717              I 130 C 0
s Trichechus_manatus.JH594618.1                          16081935 4 +  31416278 t-gca
i Trichechus_manatus.JH594618.1                         I 134 C 0
s Tupaia_chinensis.KB320831.1                             2792296 5 -   3938065 GAGCA
i Tupaia_chinensis.KB320831.1                           I 120 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    4501 5 +     13056 GAGCA
i Tupaia_tana.TupTan_flattened_line_68454               I 122 C 0
s Tursiops_truncatus.MRVK01000923.1                      69312806 5 -  96451834 gggct
i Tursiops_truncatus.MRVK01000923.1                     I 135 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                    683 5 +     10241 gaaca
i Uropsilus_gracilis.UroGra_scaffold_69449              I 134 C 0
s Ursus_maritimus.KK498671.1                              6514158 5 +  28682327 gggaa
i Ursus_maritimus.KK498671.1                            I 131 C 0
s Varecia_rubra.k141_432109                                  4707 5 -     20643 gggca
i Varecia_rubra.k141_432109                             I 115 C 0
s Varecia_variegata.k141_775891                             24248 5 -     33872 gggca
i Varecia_variegata.k141_775891                         I 115 C 0
s Vicugna_pacos.KN269600.1                                1524043 5 -   2331223 agaca
i Vicugna_pacos.KN269600.1                              I 128 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                137666 5 -    281493 gggaa
i Vulpes_lagopus.VulLag_flattened_line_2045             I 130 C 0
s Xerus_inauris.XerIna_scaffold_7898                       126308 5 -    134049 tggta
i Xerus_inauris.XerIna_scaffold_7898                    I 133 C 0
s Zalophus_californianus.ZalCal_flattened_line_3895         77920 5 -    232890 gggaa
i Zalophus_californianus.ZalCal_flattened_line_3895     I 130 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           6301 5 -      8775 gggct
i Ziphius_cavirostris.ZipCav_flattened_line_127025      I 135 C 0
e Sorex_araneus.JH798170.1                               17750754 3364 -  27805282 I
e Erinaceus_europaeus.JH835290.1                         11531598 1064 +  16010500 I
e Elephantulus_edwardii.JH947210.1                        7804622 10712 +  15467074 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     14107 296 -     20485 I
e Hylobates_pileatus_a.tarseq_592                             33341 34 -     60944 I
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               11253 3 +    209709 AA--T
s Acinonyx_jubatus.LLWD01000356.1                         2033368 2 +   3721120 aa---
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10656673 2 +  23371972 aa---
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7094017 2 -  16596857 aa---
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   16133 3 -     22067 AG--T
i Allactaga_bullata.AllBul_scaffold_70162               C 0 I 164
s Allenopithecus_nigroviridis.k141_2469532                    739 3 -     60446 ag--t
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         1460 3 -     29318 ag--t
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                          397 3 +     38766 ag--t
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          1354 3 -     80423 ag--t
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             9650 3 -     18050 ag--t
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                 10743 3 -     11521 ag--t
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                             10327 3 -     21359 ag--t
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_298055                                 1624 3 +      1823 ag--t
i Alouatta_juara.k141_298055                            C 0 C 0
s Alouatta_macconnelli.k141_1331706                          9626 3 -     10438 ag--t
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            6282 3 +      7047 ag--t
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             9562 3 +     10410 ag--t
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            3370 3 -      4927 ag--t
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             6299 3 +      6429 ag--t
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3519506 2 +   4113121 ag---
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      389695 2 -    631301 cg---
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            30088 2 +     33004 AG---
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 62012 3 +     78111 ag--t
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            4953 3 +     22701 ag--t
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5748910 3 +   9889416 AG--T
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             5497 3 -    104377 ag--t
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               5499 3 +     23246 ag--t
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     3119 3 +      5067 AG--T
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_587554                         350 3 +      9265 ag--t
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 8096 2 -     29036 cg---
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9538758 3 +  39197703 ag--t
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             60029 3 +     85812 ag--t
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                11041 3 +     89302 ag--t
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             15546 3 -     58268 ag--t
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             63537 3 +    119057 ag--t
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               5506 3 -     25888 ag--t
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 6145 3 -     16375 GG--T
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              2465 3 +      2719 GG--T
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26379531 2 +  51448160 ag---
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        4762 2 -     13118 ag---
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   42569 2 -     72089 AG---
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6559243 2 +   6870073 ag---
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138139347 2 - 161108492 ag---
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     571884 2 -    998990 ag---
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136295080 2 - 158972876 ag---
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1232163 2 -   1914593 AG---
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               113396 3 -    171031 ag--t
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 12427 3 +    125063 ag--t
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                14472 3 -    216513 ag--t
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        7012 3 -    134917 ag--t
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3218941 2 -   8989139 aa---
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           396645 2 -  15254737 aa---
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2972378 2 +   6889770 aa---
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11518831 2 +  39901454 aa---
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   13856 2 +     87036 aa---
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11265498 2 -  35597290 aa---
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11088032 2 +  39895921 aa---
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16455047 2 -  44759192 aa---
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21324582 2 + 157394656 ag---
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135705809 2 - 157403528 ag---
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_2446099                  353 3 +       369 AA--T
i Capromys_pilorides.CapPil_scaffold_2446099            C 0 C 0
s Carlito_syrichta.NW_007248099.1                          308435 3 +    345090 AG--T
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               58894 2 +     67245 cg---
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   30124 3 +     33760 CT--T
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   158247 2 -    276539 AG---
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15786016 3 -  24422027 NN--N
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15797950 3 -  24440124 aa--t
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       176141 3 +    436027 AA--T
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18890242 3 -  29618158 ag--t
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 7786 3 -     26817 ag--t
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                12026 3 +     25043 ag--t
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         7469 3 +     21754 ag--t
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4363249 2 +   7569818 ag---
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         3004 2 -      9338 ag---
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6554682 3 +   6739814 ag--t
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      26159 3 +     60454 ag--t
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          1364 3 -     21101 ag--t
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         58674 3 -    107033 ag--t
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        1566 3 -     17608 ag--t
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          29061 3 +     30494 ag--t
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          57907 3 -     59240 ag--t
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          1608 3 +     16677 ag--t
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           23766 3 +     35983 ag--t
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11990294 3 +  12117833 ag--t
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46477052 3 +  46592721 ag--t
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      40603 3 -     45581 ag--t
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       1609 3 +     35577 ag--t
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        1385 3 -     25661 ag--t
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        1363 3 -     17744 ag--t
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        20979 3 +     37128 ag--t
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           2193 3 -      6963 ag--c
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           58441 3 -     68416 ag--t
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            7484 3 +     13308 ag--t
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             5042 3 -     18223 ag--t
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             22065 3 +     25473 ag--t
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           41100 3 +     57117 ag--t
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          45779 3 +     54541 ag--t
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15961159 3 +  43084221 aa--t
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         70601 3 +    196370 ag--t
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          14781 3 +     40510 ag--t
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15138525 3 -  15256731 ag--t
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      33572 3 -     53260 ag--t
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101144136 3 + 101219884 ag--t
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                15872 3 -     21363 AA--C
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           761179 3 +    964067 AA--T
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10885902 3 +  10971483 AG--T
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147664066 3 + 156195979 ag--t
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            16051 3 +     23629 ag--t
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60612875 2 +  78930452 ga---
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         39067 2 -     40477 ag---
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 277950 3 -    399297 GA--C
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53028618 3 +  72327488 GA--C
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            51384 2 -     70449 aa---
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  207569 3 -    956709 AA--T
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 30160 3 -     67205 AA--T
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                17173 3 +     26546 AA--T
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             58259 3 -    236241 AA--T
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          183067 3 -   6883506 ag--c
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16844301 3 +  31942871 ag--t
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80036209 2 -  96802777 ag---
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18698189 2 -  18957592 tg---
i Desmodus_rotundus.KZ672188.1                          C 0 I 1
s Dicerorhinus_sumatrensis.PEKH010003161.1                 321901 2 +    993696 ag---
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   2551 2 +    151128 ag---
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   156415 3 +    228994 AG--T
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3655523 3 +   4240102 ag--t
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 27156 3 +     28912 AG--T
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                35513 3 -     73477 aa--t
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22994619 3 -  44670279 AG--C
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 11597 2 +     24177 ag---
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1490857 2 +   1727528 AA---
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        239182 3 -    369425 GG--C
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           6297 3 -      7838 GG--C
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85871532 2 +  99434291 aa---
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4703578 2 +   6522550 ag---
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5852301 2 -   7175178 ag---
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13350804 2 +  41866177 ag---
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          12294 2 +     92910 ag---
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erythrocebus_patas.Contig8                             48770703 3 -  48907691 ag--t
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          314415 2 +    330699 ag---
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             60869 2 +     89355 ag---
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              4487 3 +     13586 ag--t
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               4424 3 -      6809 ag--t
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            10897 3 +     36558 ag--t
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             7216 3 +     60246 ag--t
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                10695 3 +    109717 ag--t
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               15078 3 +     16540 ag--t
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                15351 3 +     27497 ag--t
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           17808 3 +     26808 ag--t
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                32543 3 +     46535 ag--t
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              15265 3 -     29447 ag--t
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129892344 2 - 159252932 aa---
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129279413 2 - 158578461 aa---
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 20558 2 +     52776 aa---
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Galago_moholi.ctg555                                     210225 3 -    847004 ag--t
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           12604 3 -     43889 ag--t
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           9681 3 +     27357 ag--t
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               155704 3 +    324696 ag--t
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    180654 2 -    189561 ag---
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           12482 3 -     18683 ga--t
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               4768 3 -     14630 ag--t
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119651867 3 - 195582420 ag--t
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   77026 3 +    118900 ag--t
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         1281 3 +     10286 tg--t
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_1254239                            9457 3 +      9690 tg--t
i Hapalemur_gilberti.k141_1254239                       C 0 C 0
s Hapalemur_griseus.k141_1387522                             5087 3 +     56096 tg--t
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        28337 3 -     42470 tg--t
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        44960 3 -     54384 tg--t
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              16590 2 +     53719 aa---
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                26854 2 -     91191 AG---
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2550502 3 +  31725842 aa--t
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               56893 3 +     73687 ag--c
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              146491 2 +    277961 ag---
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      277780 2 -    477199 ag---
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              6932 2 -      9143 ag---
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      4174 3 -   7690867 aa--t
i Hoolock_leuconedys.ctg79                                 C 0 I 28
s Hyaena_hyaena.HyaHya_flattened_line_20729                 16674 2 -     67322 aa---
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           18392 3 -    119109 AA--T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              4600 3 +      5897 aa--t
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_624065                               1464 3 +      2112 aa--t
i Hylobates_agilis.k141_624065                          C 0 C 0
s Hylobates_klossii.k141_466549                             11040 3 +     11537 aa--t
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14624145 3 -  25970782 aa--t
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            1401 3 -      2977 aa--t
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     5560 3 +     22540 AA--T
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7125283 3 +  13083262 ag--t
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_4418183                                    907 3 -      1457 ag--t
i Indri_indri.k141_4418183                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               8409 2 +     17520 ag---
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8565163 3 +  11848649 GG--T
i Jaculus_jaculus.JH725517.1                            C 0 I 148
s Kogia_breviceps.KogBre_flattened_line_35920               23025 2 +     37189 ag---
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          49622 3 -    147782 ag--t
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   113664 2 -    115756 aa---
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258406641 3 - 285822530 tg--t
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        23397 3 +     39228 ag--t
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            52772 3 +     63517 ag--t
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        78022 3 +    116806 ag--t
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     31036 3 -     33031 ag--t
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3085347 2 -   3498232 aa---
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    12676 3 +     22452 AA--T
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            135362 2 +   3060487 ag---
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19247771 3 +  19376315 ag--t
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                            9996 5 +     84689 agagt
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3777745 5 +   6799190 agagt
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20591489 3 -  62548349 ag--c
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11087488 2 +  39895028 aa---
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             19511 3 +     74745 ag--t
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12705967 3 +  12821369 ag--t
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                1612 3 -      3136 ag--t
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           46429 3 +     63263 ag--t
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                 1132 3 -      2568 ag--t
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 1718 3 -      7381 ag--t
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  44936 3 -     79256 ag--t
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196035044 3 + 196197964 ag--t
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11445212 3 +  11645122 GG--T
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   3883 3 -     46448 ag--t
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                1555 3 -     13212 ag--t
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 15236 3 -     55006 gg--t
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43840353 3 +  43892939 ag--t
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               16522 3 -     24607 ag--t
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               3888 3 -     27140 ag--t
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                700970 2 +    802869 ag---
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43436930 3 -  43563597 ag--t
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4449756 3 -   4543643 ag--t
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            145032 2 +    252755 ag---
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             35107 2 +     58827 ag---
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36873121 3 +  64221397 ag--t
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       63787 2 -    234502 ag---
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433              346 2 -     87323 aa---
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               12137 3 +     15977 GA--C
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1046327 3 -  26018355 GA--C
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Microcebus_murinus.CM007691.1                          16509651 3 +  47401472 AG--T
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  31052 3 -     48017 AG--C
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               22078 2 -     32043 cg---
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22819477 3 -  98408828 GG--C
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8209075 2 +  10048721 ag---
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            33727 2 +     45743 ag---
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         1483 3 +     29742 ag--t
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        10860 2 -    104932 aa---
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     5041 3 +      8497 ag--t
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 145797 2 +    154973 ag---
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                160589 2 +    265003 ag---
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                   400 2 -     19904 AG---
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  144286 2 -    168139 aa---
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          18948 2 -    100666 ag---
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70765986 3 +  92629107 ga--t
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75489048 3 +  98207768 ga--t
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67555271 3 +  89017189 ga--t
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74330226 3 +  97876770 ga--t
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             11051 3 +     98495 AA--T
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4423711 2 -  28371801 aa---
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     89442 3 -    117718 AA--T
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               967241 2 +   8389877 ag---
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5018917 2 +   6462685 ag---
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3464821 2 -   3747815 ag---
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        10036 2 +     66751 ag---
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             4445 3 -      8794 ag--c
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            117843 3 +    362372 ga--G
i Nannospalax_galili.KL201303.1                         C 0 I 4
s Nasalis_larvatus.k141_153429                               7984 3 +     48152 ag--t
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4484252 2 -  14209539 aa---
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3950412 2 -   4490290 ag---
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  48692 2 +     94413 ag---
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_302224                            1442 3 +      1516 aa--t
i Nomascus_annamensis.k141_302224                       C 0 C 0
s Nomascus_concolor.k141_226614                               702 3 -      5092 aa--t
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_642452                            1485 3 +      2851 aa--t
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             24420 3 -  18771707 aa--t
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  2123 3 +      4512 aa--t
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                30293 2 +   3668941 aa---
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65566430 5 -  95554990 agagt
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            3159 5 +      6470 agagt
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65668768 5 +  89412551 agcgt
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4995466 3 -  23139505 AA--T
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3684984 3 +  10294119 aa--t
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229587.1                            1048370 2 +   1475581 aa---
i Odobenus_rosmarus.KB229587.1                          C 0 I 30
s Odocoileus_virginianus.KZ101650.1                       1079088 2 +   1425656 aa---
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         36382 2 +     78940 ag---
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  124734 3 +    145789 GG--T
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  36533 3 +     62360 GA--C
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7224094 2 -   7562323 ag---
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              43399 3 -     66828 AG--C
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141875718 3 + 163896628 aa--t
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      307574 2 -    505867 aa---
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       38330 3 +     38679 ag--t
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18007757 3 -  38779656 AG--T
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134076648 2 - 275406953 ag---
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      77862 2 +    140051 AG---
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127574128 3 - 205426864 AG--T
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120151281 3 - 196562556 AG--T
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  33726 2 +    295523 aa---
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3637462 2 +  18214204 aa---
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5027121 2 -   6340057 aa---
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1065508 2 -   1292953 AG---
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188155721 3 - 188283584 ag--t
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             4038 3 +      5367 ag--t
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47513109 3 +  47705337 ag--t
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 67087 3 -    104429 ag--t
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    5619 3 +     14967 ag--t
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 1480 3 -      7628 ag--t
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    115160 2 -    135482 aa---
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           4745 3 -     23713 ag--t
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            24054 3 -     27972 ag--t
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      43028 3 -     45160 AG--T
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4949769 3 -   8017169 ga--c
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    11910 3 -     36578 AA--T
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            120701 2 -    122454 ag---
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1987485                           1503 3 -      5908 ag--t
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       2127 3 -     17985 ag--t
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            1494 3 +      7694 ag--t
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26739972 3 +  26888534 AG--T
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            96879 2 +    112873 ag---
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             43104 3 -     61926 ag--t
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        24535 3 +     78826 ag--t
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              8484 3 -     15800 ag--t
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        11682 3 -     16101 ag--t
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          4991 3 +      9673 ag--t
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13473987 3 -  19735023 ag--t
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           12893 3 -     31692 ag--t
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           4781 2 +     21690 ag---
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       22326 3 +     44506 ag--t
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        22538 3 +     67491 AG--T
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      12777 3 -     98129 AG--T
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     22377 3 +    147771 ag--t
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        22632 3 -     23762 ag--t
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          3098 3 -     55515 AG--T
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         22451 3 +    152463 ag--t
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                        168 3 -    119457 ag--t
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         12173 3 +    134592 ag--t
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          22761 3 -     75465 ag--t
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              186653 3 -    373494 AG--T
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19807301 3 +  19899266 ag--t
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               5229 3 -     15069 ag--t
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              5363 3 +     14865 ag--t
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                76757 3 +     78963 ag--c
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6848022 3 +  12164890 tg--t
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    667247 3 -   2312742 ag--t
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         3074 3 +     11805 AG--T
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           42411 3 +     52369 AG--T
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         34799 3 -     44753 AG--T
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            16721 3 +     27322 AG--T
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       16356 3 -     53241 AG--T
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         38628 3 -     48185 AG--T
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           33691 3 +     77221 GA--C
i Psammomys_obesus.NESX01026517.1                       C 0 I 10
s Pteronotus_parnellii.KE867983.1                            3247 2 -     27784 ag---
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        246020 2 -    344369 aa---
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13245362 2 -  17261082 ag---
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             603312 2 -   3946241 ag---
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131533706 2 - 161321710 aa---
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             29347 3 +     56732 ag--t
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6805838 3 +   6970761 ag--t
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             5232 3 +     18040 ag--t
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                15165 2 +     68503 AA---
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13914996 3 +  90463843 ga--c
i Rattus_norvegicus.chr11                               I 52 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1787189 2 +   2252614 tg---
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_1391695                           1460 3 -      1866 ag--t
i Rhinopithecus_bieti.k119_1391695                      C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206377117 3 - 206558726 AG--T
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44856017 3 -  45163003 ag--t
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                18676 2 +    109198 ag---
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       7328 2 +     12214 AG---
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15672192 3 -  43202129 AT--T
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        4109 3 +     34089 at--t
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              4050 3 -     60842 at--t
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              4145 3 +     67014 at--t
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              4123 3 +     60816 at--t
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 4060 3 -     76454 at--t
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17340785 3 -  30362882 ag--t
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         20144 3 -     62485 ag--t
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   31674 2 -    114521 aa---
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        2844 3 +     15331 ag--t
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       8241 3 +     20762 ag--t
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         118243 3 +    130994 ag--t
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           37030 3 +     46263 ag--t
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     30144 3 +     42640 ag--t
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        13188 3 +     30600 ag--t
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   99727 3 -    120886 GA--T
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            18249 2 +    739146 aa---
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2239201 3 +   2842873 ag--t
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             234141 2 -    276980 aa---
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            26968 2 +     62062 aa---
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189271238 2 + 218635234 ag---
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        14402 3 -  13920577 aa--t
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               5417 2 -      6213 ag---
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               14119 3 +     45698 AG--C
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 I 2
s Tapirus_indicus.TapInd_scaffold_176                      806260 2 +   1148477 ag---
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  56951 2 +     99546 ag---
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               25917 3 +     42269 ag--t
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               59233 3 +     65473 ag--t
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194007248 3 - 194193292 ag--t
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             38730 3 -     47444 AG--T
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  4941 3 +      6782 ag--c
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  135249 2 -    259118 tg---
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        26348 3 +     38948 ag--t
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   20078 3 -     32910 ag--t
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      1465 3 -     12939 ag--t
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       1400 3 -     14244 ag--t
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           42798 3 -     54611 ag--t
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                         604 3 -     11566 ag--t
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     2776 3 -     15592 ag--t
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          1433 3 +     14371 ag--t
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  51185 3 +     51589 ag--t
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       14366 3 +     14732 ag--t
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       4838 3 -     28054 ag--t
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44659638 3 -  44834318 ag--t
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       1941 3 +     13828 ag--t
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   4544 2 +     90398 AG---
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16081939 3 +  31416278 ag--t
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2792301 3 -   3938065 AG--G
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    4506 3 +     13056 AG--T
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69312811 2 -  96451834 ag---
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                    688 2 +     10241 aa---
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6514163 2 +  28682327 aa---
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  4712 3 -     20643 tg--t
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             24253 3 -     33872 tg--t
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1524048 2 -   2331223 aa---
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                137671 2 -    281493 aa---
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       126313 3 -    134049 aa--t
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_3895         77925 2 -    232890 aa---
i Zalophus_californianus.ZalCal_flattened_line_3895     C 0 I 30
s Ziphius_cavirostris.ZipCav_flattened_line_127025           6306 2 -      8775 ag---
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Sorex_araneus.JH798170.1                               17750754 3364 -  27805282 I
e Erinaceus_europaeus.JH835290.1                         11531598 1064 +  16010500 I
e Elephantulus_edwardii.JH947210.1                        7804622 10712 +  15467074 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     14107 296 -     20485 I
e Hylobates_pileatus_a.tarseq_592                             33341 34 -     60944 I
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I
e Acomys_cahirinus.AcoCah_scaffold_1625                    112040 0 -    189883 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               11256 27 +    209709 TG----GTAAATCA--TG----------GC------T-T---TTC----TCC-C-T---C-C----A
s Acinonyx_jubatus.LLWD01000356.1                         2033370 28 +   3721120 -tgct-acaaatca--g-----------gc------t-t---ttc----tcc-c-t---t-c----c
i Acinonyx_jubatus.LLWD01000356.1                       C 0 I 1
s Acomys_cahirinus.AcoCah_scaffold_1625                    112040 20 -    189883 -----------GGG--TG----------AC------T-T---TTT----CAC-C-C---T-C----T
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10656675 17 +  23371972 -tgtt-acgaatca--gg----------gc------t------------------------------
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 I 12
s Ailurus_fulgens.LNAC01000003.1                          7094019 25 -  16596857 -tgct-acaaatca--gg----------gc------t-t---ttc----tcc-t-------------
i Ailurus_fulgens.LNAC01000003.1                        C 0 I 4
s Allactaga_bullata.AllBul_scaffold_70162                   16300 28 -     22067 GC--T-ACAAACCC--CA----------AC------T-T---TTT----CTC-T-C---T-G----T
i Allactaga_bullata.AllBul_scaffold_70162               I 164 C 0
s Allenopithecus_nigroviridis.k141_2469532                    742 28 -     60446 tg--t-acaaacca--gg----------gc------t-t---ttc----tcc-c-t---c-c----a
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         1463 28 -     29318 tg--t-acaaacca--gg----------gc------t-t---ttc----tcc-c-t---c-c----A
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                          400 28 +     38766 tg--t-ataaacca--gg----------gc------t-t---ttc----tcc-c-t---c-c----a
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          1357 28 -     80423 tg--t-acaaacca--gg----------gc------t-t---ttc----tcc-c-t---c-c----a
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             9653 28 -     18050 tc--t-gtagatca--tg----------gc------t-c---ttc----tcc-c-t---c-c----A
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                 10746 28 -     11521 tc--t-gtagatca--tg----------gc------t-c---ttc----tcc-c-t---c-c----A
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                             10330 28 -     21359 tc--t-gtagatca--tg----------gc------t-c---ttc----tcc-c-t---c-c----A
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_298055                                 1627 28 +      1823 tc--t-gtagatca--tg----------gc------t-c---ttc----tcc-c-t---c-c----A
i Alouatta_juara.k141_298055                            C 0 C 0
s Alouatta_macconnelli.k141_1331706                          9629 28 -     10438 tc--t-gtagatca--tg----------gc------t-c---ttc----tcc-c-t---c-c----A
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            6285 28 +      7047 tc--t-gtagatca--tg----------gc------t-c---ttc----tcc-c-t---c-c----A
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             9565 28 +     10410 tc--t-gtagacca--tg----------gc------t-c---ttc----tcc-c-t---c-c----A
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            3373 28 -      4927 tc--t-gtagatca--tg----------gc------t-c---ttc----tcc-t-t---c-c----A
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             6302 28 +      6429 tc--t-gtagatca--tg----------gc------t-c---ttc----tcc-c-t---c-c----A
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3519508  8 +   4113121 -ctct-atga---------------------------------------------------------
i Ammotragus_lervia.NIVO01013474.1                      C 0 I 7
s Anoura_caudifer.AnoCau_scaffold_422                      389697 30 -    631301 -cttt-acaaatca--g-g---------gc------t-t---ttc----cccct-t---t-c----c
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 I 1
s Antilocapra_americana.AntAmePen_scaffold_42841            30090  8 +     33004 -CTCT-CTGA---------------------------------------------------------
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 I 7
s Aotus_azarae.k141_3170768                                 62015 28 +     78111 tc--t-atagatca--tg----------gc------c-c---ttc----tcc-c-t---c-c----G
i Aotus_azarae.k141_3170768                             C 0 I 5
s Aotus_griseimembra.k141_3275623                            4956 28 +     22701 tc--t-atagatca--tg----------gc------c-c---ttc----tcc-c-t---c-c----G
i Aotus_griseimembra.k141_3275623                       C 0 I 5
s Aotus_nancymaae.KZ196176.1                              5748913 28 +   9889416 TC--T-ATAGATCA--TG----------GC------C-C---TTC----TCC-C-T---C-C----G
i Aotus_nancymaae.KZ196176.1                            C 0 I 5
s Aotus_trivirgatus.k141_1740727                             5500 28 -    104377 tc--t-atagatca--tg----------gc------c-c---ttc----tcc-c-t---c-c----G
i Aotus_trivirgatus.k141_1740727                        C 0 I 5
s Aotus_vociferans.k141_718647                               5502 28 +     23246 tc--t-atagatca--tg----------gc------c-c---ttc----tcc-c-t---c-c----G
i Aotus_vociferans.k141_718647                          C 0 I 5
s Aplodontia_rufa.AprRuf_scaffold_156013                     3122 19 +      5067 TC--T-CCAAATCA--GG----------AC------T-T---T-T----------------------
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 I 5
s Arctocebus_calabarensis.k141_587554                         353 28 +      9265 tc--a-acaaatca--tg----------gc------t-t---ttc----tcc-t-t---c-c----c
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 8098 38 -     29036 -cttt-ataaatca--a-gaaatggcacgc------t-t---ttc----tcc-t-t---t-c----c
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 I 1
s Ateles_geoffroyi_b.tarseq_2582                             9538761 28 +  39197703 tc--t-gtagatca--tg----------gc------t-c---ttc----tCC-C-T---C-T----G
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             60032 28 +     85812 tc--t-gtagatca--tg----------gc------t-c---ttc----tCC-C-T---C-T----G
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                11044 28 +     89302 tc--t-gtagatca--tg----------gc------t-c---ttc----tCC-C-T---C-T----G
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             15549 28 -     58268 tc--t-gtagatca--tg----------gc------t-c---ttc----tCC-C-T---C-T----G
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             63540 28 +    119057 tc--t-gtagatca--tg----------gc------t-c---ttc----tCC-C-T---C-T----G
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               5509 28 -     25888 tc--t-gtagatca--tg----------gc------t-c---ttc----tCC-C-T---C-T----G
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 6148 28 -     16375 TG--T-ACAAATCA--TG----------GC------T-T---CTC----TCT-C-T---C-C----C
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              2468 28 +      2719 TG--T-ACAAATCA--TG----------GC------T-T---CTC----TTT-C-T---C-C----C
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26379533 20 +  51448160 -ctct-gtgaatga--gg----------gc------t-t---cc-----------------------
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        4764 20 -     13118 -ctct-gtgaatga--gg----------gc------t-t---cc-----------------------
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   42571  8 -     72089 -CTCT-GTGA---------------------------------------------------------
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 I 7
s Bison_bison.KN264915.1                                  6559245  8 +   6870073 -ctct-aTGA---------------------------------------------------------
i Bison_bison.KN264915.1                                C 0 I 7
s Bos_indicus.CM003021.1                                138139349  8 - 161108492 -ctct-aTGA---------------------------------------------------------
i Bos_indicus.CM003021.1                                C 0 I 7
s Bos_mutus.JH883513.1                                     571886  8 -    998990 -ctct-aTGA---------------------------------------------------------
i Bos_mutus.JH883513.1                                  C 0 I 7
s Bos_taurus.CM000177.6                                 136295082  8 - 158972876 -ctct-aTGA---------------------------------------------------------
i Bos_taurus.CM000177.6                                 C 0 I 7
s Bubalus_bubalis.KI419065.1                              1232165  8 -   1914593 -CTCT-ATGA---------------------------------------------------------
i Bubalus_bubalis.KI419065.1                            C 0 I 7
s Cacajao_ayresi.k141_724503                               113399 28 -    171031 tc--t-atagatca--tg----------gc------t-c---ttc----tCC-C-G---C-C----A
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 12430 28 +    125063 tc--t-atagatca--tg----------gc------t-c---ttc----tCC-C-G---C-C----A
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                14475 28 -    216513 tc--t-atagatca--tg----------gc------t-c---ttc----tCC-C-G---C-C----A
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        7015 28 -    134917 tc--t-atagatca--tg----------gc------t-c---ttc----tCC-C-G---C-C----A
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3218943 27 -   8989139 -c--t-ctcaaata--ga----------gc------t-t---ttc----tct-t-t---t-c----c
i Camelus_bactrianus.KN276303.1                         C 0 I 1
s Camelus_dromedarius.KN271192.1                           396647 27 -  15254737 -c--t-ctcaaata--ga----------gc------t-t---ttc----tct-t-t---t-c----c
i Camelus_dromedarius.KN271192.1                        C 0 I 1
s Camelus_ferus.KB016973.1                                2972380 27 +   6889770 -c--t-ctcaaata--ga----------gc------t-t---ttc----tct-t-t---t-c----c
i Camelus_ferus.KB016973.1                              C 0 I 1
s CanFam4.chr31                                          11518833 29 +  39901454 -tgct-gtaaatca--gg----------gc------t-t---ttc----tcc-t-t---t-c----c
i CanFam4.chr31                                         C 0 I 1
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   13858 29 +     87036 -tgct-gtaaatca--gg----------gc------t-t---ttc----tcc-t-t---t-c----c
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 I 1
s Canis_lupus_dingo.QKWQ01001993.1                       11265500 29 -  35597290 -tgct-gtaaatca--gg----------gc------t-t---ttc----tcc-t-t---t-c----c
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 I 1
s Canis_lupus_familiaris.chr31                           11088034 29 +  39895921 -tgct-gtaaatca--gg----------gc------t-t---ttc----tcc-t-t---t-c----c
i Canis_lupus_familiaris.chr31                          C 0 I 1
s Canis_lupus_orion.HG994411.1                           16455049 29 -  44759192 -tgct-gtaaatca--gg----------gc------t-t---ttc----tcc-t-t---t-c----c
i Canis_lupus_orion.HG994411.1                          C 0 I 1
s Capra_aegagrus.CM003214.1                              21324584  8 + 157394656 -ctct-aTGA---------------------------------------------------------
i Capra_aegagrus.CM003214.1                             C 0 I 7
s Capra_hircus.CM004562.1                               135705811  8 - 157403528 -ctct-aTGA---------------------------------------------------------
i Capra_hircus.CM004562.1                               C 0 I 7
s Capromys_pilorides.CapPil_scaffold_2446099                  356 13 +       369 TC--T-TCAAATCA--TG-------------------------------------------------
i Capromys_pilorides.CapPil_scaffold_2446099            C 0 N 0
s Carlito_syrichta.NW_007248099.1                          308438 28 +    345090 TC--T-ACAAATCA--TG----------AC------T-T---ATC----TCC-T-T---C-A----C
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               58896 29 +     67245 -c-ttcacatatca--g-g---------gc------t-t---ttc----tcc-t-t---t-c----c
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 I 1
s Castor_canadensis.CasCan_scaffold_47037                   30127 16 +     33760 CC--T-GTAAATCA--TA----------AC------T------------------------------
i Castor_canadensis.CasCan_scaffold_47037               C 0 I 11
s Catagonus_wagneri.CatWag_scaffold_1305                   158249 29 -    276539 -TGCT-ACAAACAA--GG----------AC------T-T---TTC----TCT-T-T---T-C----T
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 I 1
s Cavia_aperea.AVPZ01000278.1                            15786019 23 -  24422027 NN--N-NNNNNNNN--NN----------NN------N-N---NNN---N-NN---------------
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15797953 23 -  24440124 tc--t-acaaacca--tg----------at------a-t---ttc---c-cc---------------
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       176144 23 +    436027 TC--T-ACAAACCA--TG----------AT------A-T---TTC---C-CC---------------
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18890245 28 -  29618158 tc--t-atagatca--tg----------gc------c-c---ttc----tcc-c-t---c-c----G
i Cebus_albifrons.Contig22                              C 0 I 5
s Cebus_olivaceus.k141_93739                                 7789 28 -     26817 tc--t-atagatca--tg----------gc------c-c---ttc----tcc-c-t---c-c----G
i Cebus_olivaceus.k141_93739                            C 0 I 5
s Cebus_unicolor.k141_239009                                12029 28 +     25043 tc--t-atagatca--tg----------gc------c-c---ttc----tcc-c-t---c-c----G
i Cebus_unicolor.k141_239009                            C 0 I 5
s Cephalopachus_bancanus.k141_702587                         7472 28 +     21754 tc--t-gcaaatca--tg----------ac------t-t---atc----tcc-t-t---c-A----C
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4363251 29 +   7569818 -ctct-acaaatcg--gg----------gc------t-t---ttt----tcc-t-c---t-t----c
i Ceratotherium_simum.JH767818.1                        C 0 I 1
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         3006 29 -      9338 -ctct-acaaatcg--gg----------gc------t-t---ttt----tcc-t-c---t-t----c
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 I 1
s Cercocebus_atys.KQ010443.1                              6554685 28 +   6739814 tg--t-acaaacca--gg----------gc------t-t---ttc----tcc-c-t---C-C----A
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      26162 28 +     60454 tg--t-acaaacca--gg----------gc------t-t---ttc----tcc-c-t---c-c----A
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          1367 28 -     21101 tg--t-acaaacca--gg----------gc------t-t---ttc----tcc-c-t---c-c----A
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         58677 28 -    107033 tg--t-acaaacca--gg----------gc------t-t---ttc----tcc-c-t---c-c----a
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        1569 28 -     17608 tg--t-acaaacca--gg----------gc------t-t---ttc----tcc-c-t---c-c----a
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          29064 28 +     30494 tg--t-acaaacca--gg----------gc------t-t---ttc----tcc-c-t---c-c----A
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          57910 28 -     59240 tg--t-acaaacca--gg----------gc------t-t---ttc----tcc-c-t---c-c----A
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          1611 28 +     16677 tg--t-acaaacca--gg----------gc------t-t---ttc----tcc-c-t---c-c----A
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           23769 28 +     35983 tg--t-acaaacca--gg----------gc------t-t---ttc----tcc-c-t---c-c----A
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11990297 28 +  12117833 tg--t-acaaacca--gg----------gc------t-t---ttc----tcc-c-t---c-c----a
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46477055 28 +  46592721 tg--t-acaaacca--gg----------gc------t-t---ttc----tcc-c-t---c-c----a
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      40606 28 -     45581 tg--t-acaaacca--gg----------gc------t-t---ttc----tcc-c-t---c-c----A
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       1612 28 +     35577 tg--t-acaaacca--gg----------gc------t-t---ttc----tcc-c-t---c-c----a
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        1388 28 -     25661 tg--t-acaaacca--gg----------gc------t-t---ttc----tcc-c-t---c-c----A
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        1366 28 -     17744 tg--t-acaaacca--gg----------gc------t-t---ttc----tcc-c-t---c-c----A
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        20982 28 +     37128 tg--t-acaaacca--gg----------gc------t-t---ttc----tcc-c-t---c-c----A
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           2196 30 -      6963 tc--t-caa-atcaaggt----------tc------t-t---ccc----cctct-c---t-c----c
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 I 17
s Cheirogaleus_major.k141_1157592                           58444 28 -     68416 tc--t-acaaatca--tg----------gc------t-t---ctc----tcc-c-t---c-c----c
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            7487 28 +     13308 tc--t-acaaatca--tg----------gc------t-t---ctc----tcc-c-t---c-c----c
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             5045 28 -     18223 tc--t-ataggtca--tg----------gc------t-c---ttc----tCC-T-G---C-C----G
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             22068 28 +     25473 tc--t-ataggtca--tg----------gc------t-c---ttc----tCC-T-G---C-C----G
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           41103 28 +     57117 tc--t-ataggtca--tg----------gc------t-c---ttc----tCC-T-G---C-C----G
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          45782 28 +     54541 tc--t-ataggtca--tg----------gc------t-c---ttc----tCC-T-G---C-C----G
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15961162 26 +  43084221 ac--t-a-aaatca--TG----------AA------A-T---T-C---C-CC-C-T---T-C----A
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         70604 30 +    196370 tctat-atagatca--tg----------gc------t-c---ttc----tCC-C-G---C-C----A
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          14784 30 +     40510 tctat-atagatca--tg----------gc------t-c---ttc----tCC-C-G---C-C----A
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15138528 28 -  15256731 tg--t-acaaacca--gg----------gc------t-t---ttc----tcc-c-t---c-c----a
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      33575 28 -     53260 tg--t-acaaacca--gg----------gc------t-t---ttc----tcc-c-t---c-c----a
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101144139 28 + 101219884 tg--t-acaaacca--gg----------gc------t-t---ttc----tCC-C-T---C-C----A
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                15875 30 -     21363 TC--T-AAA-TTCGAGGG----------TT------T-C---CTC----CCT-C-T---GCC----A
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 I 15
s Choloepus_hoffmanni.KN194586.1                           761182 30 +    964067 TC--T-AAA-TTCGAGGG----------TT------T-C---CTC----CCT-C-T---GCC----A
i Choloepus_hoffmanni.KN194586.1                        C 0 I 15
s Colobus_angolensis.KN985967.1                          10885905 28 +  10971483 TG--T-ACAAACCA--TG----------GC------T-T---TTC----TCC-C-T---T-C----A
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147664069 28 + 156195979 tg--t-acaaacca--tg----------gc------t-t---ttc----tCC-C-T---T-C----A
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            16054 28 +     23629 tg--t-acaaacca--tg----------gc------t-t---ttc----tCC-C-T---T-C----A
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60612877 23 +  78930452 -c--t-acaaatca--gt----------ac------t-t---tta----tgt-t-------------
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         39069 29 -     40477 -ctct-acaaaacg--cg----------gc------t-t---ttc----tcc-t-t---t-t----c
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 I 1
s Cricetomys_gambianus.CriGam_scaffold_949                 277953 29 -    399297 TT--T-ACAGATCA--TG----------AC------T-C---TTT----CACCC-T---T-C----T
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53028621 31 +  72327488 TT--T-ACACATCA--TG----------ACT--AC-A-T---TTT----TAC-C-C---T-A----T
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            51386 28 -     70449 -tgct-acaaatca--g-----------gc------t-t---tcc----tcc-c-t---t-c----c
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 I 1
s Ctenodactylus_gundi.CteGun_scaffold_447                  207572 28 -    956709 TC--T-AACAATCA--TG----------AC------T-T---TTC----CTC-T-T---T-A----A
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 I 4
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 30163 28 -     67205 TC--T-GCAAATCA--TG----------AT------G-T---TTC---T-CT-T-T---C-T----A
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                17176 28 +     26546 TC--T-ACAAGTCA--TG----------AT------A-T---TTC---T-CC-C-T---C-C----A
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             58262 28 -    236241 TT--T-ATAAATCA--TG----------AC------A-T---TTC---T-CC-C-T---C-C----A
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          183070 29 -   6883506 tc--t-caa-attagggt----------tc------t-t---ctc----ccc-c-t---t-c----c
i Dasypus_novemcinctus.JH568778.1                       C 0 I 17
s Daubentonia_madagascariensis.ctg11                     16844304 12 +  31942871 tc--t-acaaatca--t--------------------------------------------------
i Daubentonia_madagascariensis.ctg11                    C 0 I 11
s Delphinapterus_leucas.KZ290064.1                       80036211 20 -  96802777 -ctct-gtgaatga--gg----------gc------t-t---cc-----------------------
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18698192 13 -  18957592 ------------------------------------t-t---ttc----tcc-t-t---t-c----c
i Desmodus_rotundus.KZ672188.1                          I 1 I 1
s Dicerorhinus_sumatrensis.PEKH010003161.1                 321903 29 +    993696 -ctct-accaatcg--gg----------gc------t-t---ttt----tcc-t-c---t-t----c
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 I 1
s Diceros_bicornis.DicBicMic_scaffold_9545                   2553 29 +    151128 -ctct-acaaatcg--gg----------gc------t-t---ttt----ccc-t-c---t-t----c
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 I 1
s Dinomys_branickii.DinBra_scaffold_1996                   156418 27 +    228994 TC--T-A-AAATCG--TG----------AA------G-T---TTC---T-TC-C-T---C-A----A
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3655526 27 +   4240102 tt--t-ataagtca--tg----------ag------c-t---tt-----tcc-t-t---C-C----T
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 27159 27 +     28912 TT--T-ATAAGTCA--TG----------AG------C-T---TT-----TCC-T-T---C-C----T
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                35516 28 -     73477 tc--t-acaaatca--TG----------CT------A-T---TTC---T-CC-A-T---C-C----A
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22994622  5 -  44670279 TT--C-AC-----------------------------------------------------------
i Echinops_telfairi.JH980316.1                          C 0 I 5
s Eidolon_helvum.KE772537.1                                 11599 29 +     24177 -ttct-acatatca--gg----------gc------t-t---ttc----tcc-t-t---t-g----t
i Eidolon_helvum.KE772537.1                             C 0 I 1
s Elaphurus_davidianus.JRFZ01086400.1                     1490859  8 +   1727528 -CTCT-ATGA---------------------------------------------------------
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 I 7
s Ellobius_lutescens.LOEQ01003611.1                        239185 27 -    369425 TT--T-ACATACCA--TG----------AC------T-T----TT----TAC-C-C---T-C----T
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           6300 27 -      7838 TT--T-ACATATCA--TG----------AC------T-T----TT----TAA-C-C---T-C----T
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85871534 29 +  99434291 -tgct-agaaatca--gg----------gc------t-t---ttc----tcc-t-t---t-c----c
i Enhydra_lutris.KZ291749.1                             C 0 I 1
s Eptesicus_fuscus.JH977687.1                             4703580 29 +   6522550 -cccc-acatacca--ga----------gc------t-t---ttc----cca-t-t---t-c----t
i Eptesicus_fuscus.JH977687.1                           C 0 I 4
s Equus_asinus.JREZ01000062.1                             5852303 29 -   7175178 -ctct-acaaatca--gg----------gc------t-t---ttc----tcc-t-c---t-c----c
i Equus_asinus.JREZ01000062.1                           C 0 I 1
s Equus_caballus.CM000402.2                              13350806 29 +  41866177 -ctct-acaaatca--gg----------gc------t-t---ttc----tcc-t-c---t-c----c
i Equus_caballus.CM000402.2                             C 0 I 1
s Equus_przewalskii.ATBW01073585.1                          12296 29 +     92910 -ctct-acaaatca--gg----------gc------t-t---ttc----tcc-t-c---t-c----c
i Equus_przewalskii.ATBW01073585.1                      C 0 I 1
s Erythrocebus_patas.Contig8                             48770706 28 -  48907691 tg--t-acaaacca--gg----------gc------t-t---ttc----tcc-c-t---c-c----a
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          314417 20 +    330699 -ctct-gtgaatga--gg----------gc------t-t---cc-----------------------
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             60871 20 +     89355 -ctct-gtgaacga--gg----------gc------t-t---cc-----------------------
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              4490 28 +     13586 tc--t-acaaatca--tg----------gc------t-t---ctc----tcc-c-c---c-C----T
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               4427 28 -      6809 tc--t-acaaatca--tg----------gc------t-t---ctc----tcc-c-c---c-c----a
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            10900 28 +     36558 tc--t-acaaatca--tg----------gc------t-t---ctc----tcc-c-c---c-c----c
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             7219 28 +     60246 tc--t-acaaatca--tg----------gc------t-t---ctc----tcc-c-c---c-c----c
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                10698 28 +    109717 tc--t-acaaatca--tg----------gc------t-t---ctc----tct-c-c---c-c----c
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               15081 28 +     16540 tc--t-acaaatca--tg----------gc------t-t---ctc----tcc-c-c---c-c----c
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                15354 28 +     27497 tc--t-acaaatca--tg----------gc------t-t---ctc----tcc-c-c---c-c----c
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           17811 28 +     26808 tc--t-acaaatca--tg----------gc------t-t---ctc----tcc-c-t---c-c----c
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                32546 28 +     46535 tc--t-acaaatca--tg----------gc------t-t---ctc----tcc-c-c---c-C----T
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              15268 28 -     29447 tc--t-acaaatca--tg----------gc------t-t---ctc----tcc-c-c---c-C----T
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129892346 28 - 159252932 -tgct-acaaatca--g-----------gc------t-t---ttc----tcc-c-t---t-c----c
i Felis_catus.CM001386.2                                C 0 I 1
s Felis_catus_fca126.CM031420.1                         129279415 28 - 158578461 -tgct-acaaatca--g-----------gc------t-t---ttc----tcc-c-t---t-c----c
i Felis_catus_fca126.CM031420.1                         C 0 I 1
s Felis_nigripes.FelNig_flattened_line_8080                 20560 28 +     52776 -tgct-acaaatca--g-----------gc------t-t---ttc----tcc-c-t---t-c----c
i Felis_nigripes.FelNig_flattened_line_8080             C 0 I 1
s Galago_moholi.ctg555                                     210228 28 -    847004 tc--t-acaaatca--tg----------gc------t-t---ttc----tcc-t-t---c-c----c
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           12607 28 -     43889 tc--t-acaaatca--tg----------gc------t-t---ttc----tcc-t-t---c-c----c
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           9684 28 +     27357 tc-c--acaaattg--tg----------gc------t-t---ttc----tcc-t-t---c-c----c
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               155707 28 +    324696 tc--t-accaatca--tg----------gc------t-t---tCC----AAC-C-T---C-C----C
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    180656  8 -    189561 -ctct-atga---------------------------------------------------------
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 I 7
s Glis_glis.GliGli_scaffold_79770                           12485 28 -     18683 tc--t-tcaaactg--tc----------tc------t-t---ttt----tcc-c-t---c-T----T
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               4771 28 -     14630 tg--t-acaaatta--tg----------gc------t-t---ttc----tcc-c-t---c-c----A
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119651870 28 - 195582420 tg--t-acaaatta--tg----------gc------t-t---ttc----tcc-c-t---c-c----A
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   77029 29 +    118900 tc--t-tcaaactg--tc----------ac------t-t---ttt----tcc-ctt---c-c----t
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         1284 28 +     10286 tc--t-acaaatca--tg----------gc------t-t---ctc----tcc-c-t---c-c----c
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_1254239                            9460 28 +      9690 tc--t-acaaatca--tg----------gc------t-t---ctc----tcc-c-t---c-c----c
i Hapalemur_gilberti.k141_1254239                       C 0 C 0
s Hapalemur_griseus.k141_1387522                             5090 28 +     56096 tc--t-acaaatca--tg----------gc------t-t---ctc----tcc-c-t---c-c----c
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        28340 28 -     42470 tc--t-acaaatca--tg----------gc------t-t---ctc----tcc-c-t---c-c----c
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        44963 28 -     54384 tc--t-acaaatca--tg----------gc------t-t---ctc----tcc-c-t---c-c----c
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              16592 28 +     53719 -tgct-acaaatca--a-----------gc------t-t---tcc----tcc-c-t---t-c----c
i Helogale_parvula.HelPar_flattened_line_22962          C 0 I 1
s Hemitragus_hylocrius.HemHyl_scaffold_16669                26856  8 -     91191 -CTCT-ATGA---------------------------------------------------------
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 I 7
s Heterocephalus_glaber.JH602058.1                        2550505  9 +  31725842 tc--t-acacat-------------------------------------------------------
i Heterocephalus_glaber.JH602058.1                      C 0 I 7
s Heterohyrax_brucei.HetBruBak_scaffold_25354               56896  5 +     73687 tc--t-ac-----------------------------------------------------------
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 I 5
s Hippopotamus_amphibius.HipAmp_scaffold_1308              146493 29 +    277961 -ctct-atgaatga--gg----------gc------t-t---ttc----tct-t-t---t-c----c
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 I 1
s Hipposideros_armiger.JXIK01001085.1                      277782 29 -    477199 -ctct-acaaatca--gg----------gc------t-t---ttc----tcc-t-t---t-c----c
i Hipposideros_armiger.JXIK01001085.1                   C 0 I 1
s Hipposideros_galeritus.HipGal_scaffold_104691              6934 29 -      9143 -ctct-acaaatca--gg----------gc------t-t---ttc----tcc-t-t---t-c----c
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 I 1
s Hoolock_leuconedys.ctg649                                   103200 28 +    115816 tg--t-acaaatca--tg----------gc------t-t---ttc----tcc-c-t---c-c----A
i Hoolock_leuconedys.ctg649                                I 143 I 15
s Hyaena_hyaena.HyaHya_flattened_line_20729                 16676 26 -     67322 -tatt-ataaatca--g-----------gc------t-t---ttc----tcc-c-t---t-------
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 I 2
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           18395 28 -    119109 TC--T-ACAAATAA--TG----------GT------A-T---TTC---T-CC-A-T---C-C----A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 I 6
s Hylobates_abbotti.k141_493872                              4603 28 +      5897 tg--t-acaaacca--tg----------gc------t-t---ttc----tcc-c-t---c-c----A
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_624065                               1467 28 +      2112 tg--t-acaaacca--tg----------gc------t-t---ttc----tcc-c-t---c-c----A
i Hylobates_agilis.k141_624065                          C 0 C 0
s Hylobates_klossii.k141_466549                             11043 28 +     11537 tg--t-acaaatca--tg----------gc------t-t---ttc----tcc-c-t---c-c----A
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14624148 28 -  25970782 tg--t-acaaatca--tg----------gc------t-t---ttc----tcc-c-t---c-c----A
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            1404 28 -      2977 tg--t-acaaacca--tg----------gc------t-t---ttc----tcc-c-t---c-c----A
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     5563 28 +     22540 TG--T-ACAAATCA--CA----------AC------T-T---TTC----TCC-C-T---C-C----A
i Hystrix_cristata.HysCri_scaffold_50788                C 0 I 6
s Ictidomys_tridecemlineatus.JH393315.1                   7125286 23 +  13083262 tc--t-acaaatca--ca----------ac------a-t-----t----gct-c-t-----------
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 I 3
s Indri_indri.k141_4418183                                    910 32 -      1457 tg--t-acaaatca--tg----------gc------t-t---ctc----tct-c-c---c-cgccCC
i Indri_indri.k141_4418183                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               8411 20 +     17520 -ctct-gtgaatga--gg----------gc------t-t---cc-----------------------
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8565314 25 +  11848649 ------acaaaccC--CA----------AC------T-T---TTT----CTC-C-C---T-G----T
i Jaculus_jaculus.JH725517.1                            I 148 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               23027 20 +     37189 -ctct-gtgaatga--gg----------gc------t-t---cc-----------------------
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          49625 32 -    147782 tc--t-gtagatca--tg----------gc------t-c---ttctttctcc-c-t---c-t----g
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   113666 29 -    115756 -ctcc-acatacaa--ga----------gc------t-t---gtt----tcc-t-t---t-c----t
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 I 1
s Lemur_catta.scaffold_1                                258406644 28 - 285822530 tc--t-acaaatca--tg----------gc------t-t---ctc----tcc-c-t---c-c----c
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        23400 31 +     39228 tc--t-acaaatca--tg----------gc------t-t---ctc----tgt-c-tcccc-c----C
i Lepilemur_ankaranensis.k141_884009                    C 0 I 4
s Lepilemur_dorsalis.k141_134267                            52775 31 +     63517 tc--t-acaaatca--tg----------gc------t-t---ctc----tgt-c-tcccc-c----C
i Lepilemur_dorsalis.k141_134267                        C 0 I 4
s Lepilemur_ruficaudatus.k141_617879                        78025 31 +    116806 tc--t-acaaatca--tg----------gc------t-t---ctc----tct-c-tcccc-c----C
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     31039 31 -     33031 tc--t-acaaatca--tg----------gc------t-t---ctc----tgt-c-tcccc-c----C
i Lepilemur_septentrionalis.k141_578524                 C 0 I 4
s Leptonychotes_weddellii.KB714749.1                      3085349 29 -   3498232 -tgct-ataaatca--gg----------gc------t-t---ttc----tcc-t-t---t-c----c
i Leptonychotes_weddellii.KB714749.1                    C 0 I 1
s Lepus_americanus.LepAme_scaffold_62849                    12679 28 +     22452 TT--G-ACAAATCA--CC----------TC------T-T---TTC----TTC-C-T---C-C----C
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            135364 20 +   3060487 -ctct-gtgaatga--gg----------gc------t-t---cc-----------------------
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19247774 28 +  19376315 tg--t-acaaacca--gg----------tc------t-t---ttc----tcc-c-t---c-c----a
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           10001 28 +     84689 tc--t-acaaatca--tg----------gc------t-t---ttc----tcc-t-t---c-c----c
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3777750 28 +   6799190 tc--t-acaaatca--tg----------gc------t-t---ttc----tcc-t-t---c-c----c
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20591492  5 -  62548349 tc--t-ac-----------------------------------------------------------
i Loxodonta_africana.GL010040.1                         C 0 I 5
s Lycaon_pictus.CM007556.1                               11087490 29 +  39895028 -tgct-gtaaatca--gg----------gc------t-t---ttc----tcc-t-t---t-c----c
i Lycaon_pictus.CM007556.1                              C 0 I 1
s Macaca_arctoides.k141_2201161                             19514 28 +     74745 tg--t-acaaacca--gg----------gc------t-t---ttc----tcc-c-t---c-c----a
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12705970 28 +  12821369 tg--t-acaaacca--gg----------gc------t-t---ttc----tcc-c-t---c-c----a
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                1615 28 -      3136 tg--t-acaaacca--gg----------gc------t-t---ttc----tcc-c-t---c-c----A
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           46432 28 +     63263 tg--t-acaaacca--gg----------gc------t-t---ttc----tcc-c-t---c-c----a
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                 1135 28 -      2568 tg--t-acaaacca--gg----------gc------t-t---ttc----tcc-c-t---c-c----A
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 1721 28 -      7381 tg--t-acaaacca--gg----------gc------t-t---ttc----tcc-c-t---c-c----A
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  44939 28 -     79256 tg--t-acaaacca--gg----------gc------t-t---ttc----tcc-c-t---c-c----a
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196035047 28 + 196197964 tg--t-acaaacca--gg----------gc------t-t---ttc----tcc-c-t---c-c----A
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11445215 28 +  11645122 TG--T-ACAAACCA--GG----------GC------T-T---TTC----TCC-C-T---C-C----A
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   3886 28 -     46448 tg--t-acaaacca--gg----------gc------t-t---ttc----tcc-c-t---c-c----A
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                1558 28 -     13212 tg--t-ataaacca--gg----------gc------t-t---ttc----tcc-c-t---c-c----A
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 15239 28 -     55006 tg--t-acaaacca--gg----------gc------t-t---ttc----tcc-c-t---c-c----a
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43840356 28 +  43892939 tg--t-gcaaacca--gg----------gc------t-t---ttc----tcc-c-t---c-c----a
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               16525 28 -     24607 tg--t-acaaacca--gg----------gc------t-t---ttc----tcc-c-t---c-c----A
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               3891 28 -     27140 tg--t-acaaacca--gg----------gc------t-t---ttc----tcc-c-t---c-c----A
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                700972 29 +    802869 -ctct-acatatca--gg----------gc------t-t---ttc----tcc-t-t---t-g----t
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 I 1
s Mandrillus_leucophaeus.scaffold125                     43436933 28 -  43563597 tg--t-acaaacca--gg----------gc------t-t---ttc----tcc-c-t---c-c----a
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4449759 28 -   4543643 tg--t-acaaacca--gg----------gc------t-t---ttc----tcc-c-t---c-c----a
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            145034 30 +    252755 -ctct-acaaatca--gg----------ta------ttt---tta----tct-t-t---t-c----c
i Manis_javanica.JSZB01003966.1                         C 0 I 1
s Manis_pentadactyla.KN017078.1                             35109 30 +     58827 -ctct-acaaatca--gg----------ta------ttt---tta----tct-t-t---t-c----c
i Manis_pentadactyla.KN017078.1                         C 0 I 1
s Marmota_marmota.CZRN01000005.1                         36873124 23 +  64221397 tc--t-acaaatca--ca----------ac------a-t-----t----gct-c-t-----------
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       63789 29 -    234502 -ccct-acaaatcg--ga----------gc------t-t---ttc----tcc-t-t---t-c----c
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 I 1
s Mellivora_capensis.MelCap_flattened_line_15433              348 29 -     87323 -tgct-agaaatca--gg----------gc------t-t---ttc----tcc-t-t---t-c----c
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 I 1
s Meriones_unguiculatus.MerUng_scaffold_52233               12140 28 +     15977 CT--T-ACACTTCA--TG----------TT------T-T---TTT----CAC-C-A---T-C----T
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 I 5
s Mesocricetus_auratus.KB708139.1                         1046330 28 -  26018355 TT--T-ACACATCG--TG----------A-----C-A-T---TTT----TAC-C-C---T-A----T
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Microcebus_murinus.CM007691.1                          16509654 28 +  47401472 TC--T-ACAAATCA--tg----------gc------t-t---ctc----tcc-c-t---c-c----c
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  31055  5 -     48017 TT--C-AC-----------------------------------------------------------
i Microgale_talazaci.MicTal_scaffold_34660              C 0 I 5
s Micronycteris_hirsuta.MicHir_scaffold_37978               22080 29 -     32043 -cttt-acagatca--g-g---------gc------t-t---ttc----tcc-c-t---t-c----c
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 I 1
s Microtus_ochrogaster.CM001673.1                        22819480 27 -  98408828 TT--T-ACATATCA--TG----------AC------T-T----TT----TAC-C-T---T-C----T
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8209077 29 +  10048721 -ctcc-gcaaacta--gg----------gc------t-t---ttc----tcc-t-t---G-T----C
i Miniopterus_natalensis.LDJU01000022.1                 C 0 I 1
s Miniopterus_schreibersii.MinSch_scaffold_24116            33729 29 +     45743 -ctcc-gcaaacta--gg----------gc------t-t---ttc----tcc-t-t---g-c----c
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 I 1
s Miopithecus_ogouensis.k141_2935907                         1486 28 +     29742 tg--t-acaaacca--gg----------gc------t-t---ttc----tcc-c-t---c-c----A
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        10862 29 -    104932 -tgct-ataaatca--gg----------gc------t-t---ttc----tcc-t-t---t-c----c
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 I 1
s Mirza_zaza.k141_226143                                     5044 28 +      8497 tt--t-acaaatca--tg----------gc------t-t---ctc----tcc-c-t---c-c----c
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 145799 20 +    154973 -ctct-gtgaatga--gg----------gc------t-t---cc-----------------------
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                160591 29 +    265003 -cttt-acatatta--g-g---------gc------t-t---ttc----ttt-t-t---t-c----c
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 I 2
s Moschus_moschiferus.MosMos_scaffold_78805                   402  8 -     19904 -CTTT-GTGG---------------------------------------------------------
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 I 7
s Mungos_mungo.MunMun_flattened_line_8729                  144288 28 -    168139 -tgct-gcaaatca--a-----------gc------t-t---tcc----tcc-c-t---t-c----c
i Mungos_mungo.MunMun_flattened_line_8729               C 0 I 1
s Murina_feae.MurFea_scaffold_2254                          18950 29 -    100666 -ctcc-atatacga--ga----------gc------t-t---ttc----ccc-t-t---t-c----t
i Murina_feae.MurFea_scaffold_2254                      C 0 I 1
s Mus_caroli.LT608236.1                                  70765989 28 +  92629107 gt--t-atacatta--tg----------ac------t-t---ttt----CAC-C-C---T-C----T
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75489051 28 +  98207768 gt--t-acacgtta--tg----------cc------t-t---ttt----CAC-C-C---T-C----T
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67555274 28 +  89017189 gt--t-acacatta--tg----------ac------t-t---ttt----CAC-C-C---T-C----T
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74330229 28 +  97876770 gtg---acacgtta--tg----------cc------t-t---ttt----CAC-C-C---T-C----T
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             11054 28 +     98495 TC--T-TCAAACCT--TC----------AC------T-T---TTT----TCT-C-T---C-C----A
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4423713 29 -  28371801 -tgct-agaaatca--gg----------gt------t-t---ttc----tcc-t-t---t-c----c
i Mustela_putorius.JH417978.1                           C 0 I 1
s Myocastor_coypus.MyoCoy_scaffold_3653                     89445 28 -    117718 TC--T-GCAAATCA--TG----------AT------G-T---TTC---T-CT-T-T---C-T----A
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               967243 29 +   8389877 -ctcc-acatacca--ga----------gc------t-t---gtc----ccc-t-t---t-c----t
i Myotis_brandtii.KE161952.1                            C 0 I 1
s Myotis_davidii.KB114863.1                               5018919 29 +   6462685 -ctcc-acatatca--ga----------gc------t-t---gtc----ccc-t-t---t-c----c
i Myotis_davidii.KB114863.1                             C 0 I 1
s Myotis_lucifugus.GL429887.1                             3464823 29 -   3747815 -ctcc-acatacca--ga----------gc------t-t---gtc----ccc-t-t---t-c----t
i Myotis_lucifugus.GL429887.1                           C 0 I 1
s Myotis_myotis.MyoMyo_scaffold_6123                        10038 29 +     66751 -ctcc-acatatca--ga----------gc------t-t---gtc----ccc-t-t---t-c----t
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 I 1
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             4448 30 -      8794 tc--t-aaa-gtcaatgc----------tg------t-c---ttt----cct-c-t---ccc----t
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 I 17
s Nannospalax_galili.KL201303.1                            117850 28 +    362372 CC--T-ACTAAATA--CA----------AC------T-A---TTT----TGC-C-C---T-C----T
i Nannospalax_galili.KL201303.1                         I 4 C 0
s Nasalis_larvatus.k141_153429                               7987 28 +     48152 tg--t-acaaacca--tg----------gc------t-t---ttc----tCC-C-T---T-C----A
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4484254 29 -  14209539 -tgct-ataaatca--gg----------gc------t-t---ttc----tcc-t-t---t-c----c
i Neomonachus_schauinslandi.NINY01007774.1              C 0 I 1
s Neophocaena_asiaeorientalis.KZ688543.1                  3950414 20 -   4490290 -ctct-gtgaatga--gg----------gc------t-t---cc-----------------------
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  48694 28 +     94413 -cttt-acaaatca--g-----------gc------a-t---ttc----tcc-t-t---t-c----c
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 I 1
s Nomascus_annamensis.k141_302224                            1445 28 +      1516 tg--t-acaaatca--tg----------gc------t-t---ttc----tcc-c-t---c-c----A
i Nomascus_annamensis.k141_302224                       C 0 C 0
s Nomascus_concolor.k141_226614                               705 28 -      5092 tg--t-acaaatca--tg----------gc------t-t---ttc----tcc-c-t---c-c----A
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_642452                            1488 28 +      2851 tg--t-acaaatca--tg----------gc------t-t---ttc----tcc-c-t---c-c----A
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             24423 28 -  18771707 tg--t-acaaatca--tg----------gc------t-t---ttc----tcc-c-t---c-c----A
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  2126 28 +      4512 tg--t-acaaatca--tg----------gc------t-t---ttc----tcc-c-t---c-c----A
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                30295 29 +   3668941 -tgct-ataaatca--gg----------gc------t-t---ttc----tcc-t-t---t-c----c
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 I 1
s Nycticebus_bengalensis.LG16                            65566435 28 -  95554990 tc--t-ataaatcc--tg----------gc------t-t---ttc----tcc-t-t---c-c----c
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            3164 28 +      6470 tc--t-ataaatcc--tg----------gc------t-t---ttc----tcc-t-t---c-c----c
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65668773 28 +  89412551 tc--t-acaaatcc--tg----------gc------t-t---ttc----tcc-t-t---c-c----c
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4995469 27 -  23139505 TT--G-ACAAATTA--CC----------AC------T-T----TC----TCC-C-t---a-c----c
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3684987 28 +  10294119 tc--t-gcaaatca--tg----------at------g-t---tttt----ct-t-c---c-c----A
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             678917 29 -   3126709 -tgct-ataaatca--gg----------gc------t-t---ttc----tcc-t-t---t-c----c
i Odobenus_rosmarus.KB229369.1                          I 164 I 30
s Odocoileus_virginianus.KZ101650.1                       1079090  8 +   1425656 -ctct-aTGA---------------------------------------------------------
i Odocoileus_virginianus.KZ101650.1                     C 0 I 7
s Okapia_johnstoni.LVCL01S0017931.1                         36384  8 +     78940 -ctct-atga---------------------------------------------------------
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 I 7
s Ondatra_zibethicus.OndZib_scaffold_6821                  124737 27 +    145789 TT--T-ACATATCA--TG----------AC------T-T----TT----TAC-C-C---T-C----T
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  36536 28 +     62360 TT--T-ACACATCA--TG----------CC------T-T---TTT----TAC-C-T---T-C----T
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7224096 20 -   7562323 -ctct-gtgaatga--gg----------gc------t-t---cc-----------------------
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              43402  5 -     66828 TC--T-AT-----------------------------------------------------------
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 I 5
s Oryctolagus_cuniculus.CM000803.1                      141875721 28 + 163896628 ttg---acaaatca--cc----------tc------t-t---ttc----ttc-c-t---c-c----c
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      307576 29 -    505867 -tgct-ataaatca--gg----------gc------t-t---ttc----tcc-t-t---t-c----c
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 I 1
s Otolemur_crassicaudatus.k141_321880                       38333 28 +     38679 tc--t-acaaatca--tg----------gc------t-t---ttc----tcc-t-t---c-c----c
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18007760 28 -  38779656 TC--T-ACAAATCA--TG----------GC------T-T---TTC----TCC-T-T---C-C----C
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134076650  8 - 275406953 -ctct-atga---------------------------------------------------------
i Ovis_aries.CM001582.2                                 C 0 I 7
s Ovis_canadensis.OviCan_scaffold_6251                      77864  8 +    140051 -CTCT-ATGA---------------------------------------------------------
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 I 7
s Pan_paniscus.CM003386.1                               127574131 28 - 205426864 TG--T-ACAAATTA--TG----------GC------T-T---TTC----TCC-C-T---C-C----A
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120151284 28 - 196562556 TG--T-ACAAATTA--TG----------GC------T-T---TTC----TCC-C-T---C-C----A
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  33728 26 +    295523 -tgct-acaaatca--g-----------gc------t-t---ttc----tcc-c-t---t-------
i Panthera_onca.PanOnc_flattened_line_1615              C 0 I 22
s Panthera_pardus.KV860323.1                              3637464 26 +  18214204 -tgct-acaaatca--g-----------gc------t-t---ttc----tcc-c-t---t-------
i Panthera_pardus.KV860323.1                            C 0 I 22
s Panthera_tigris.KE721879.1                              5027123 28 -   6340057 -tgct-acaaatca--g-----------gc------t-t---ttc----tcc-c-t---t-c----t
i Panthera_tigris.KE721879.1                            C 0 I 1
s Pantholops_hodgsonii.KE114631.1                         1065510  8 -   1292953 -CTCT-ATGA---------------------------------------------------------
i Pantholops_hodgsonii.KE114631.1                       C 0 I 7
s Papio_anubis.CM001492.2                               188155724 28 - 188283584 tg--t-acaaacca--ag----------gc------t-t---ttc----tCC-C-T---C-C----A
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             4041 28 +      5367 tg--t-acaaacca--ag----------gc------t-t---ttc----tcc-c-t---c-c----A
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47513112 28 +  47705337 tg--t-acaaacca--ag----------gc------t-t---ttc----tcc-c-t---c-c----a
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 67090 28 -    104429 tg--t-acaaacca--gg----------gc------t-t---ttc----tcc-c-t---c-c----a
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    5622 28 +     14967 tg--t-acaaacca--ag----------gc------t-t---ttc----tcc-c-t---c-c----A
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 1483 28 -      7628 tg--t-acaaacca--ag----------gc------t-t---ttc----tcc-c-t---c-c----A
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    115162 28 -    135482 -tgct-acaaatca--g-----------gc------t-t---tcc----tcc-c-t---t-c----c
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 I 1
s Perodicticus_ibeanus.k141_117958                           4748 28 -     23713 tc--a-acaaccca--ag----------gc------t-t---ttc----tcc-t-t---c-c----c
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            24057 28 -     27972 tc--a-acaactca--tg----------gc------t-t---ttc----tcc-t-t---c-c----c
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      43031 28 -     45160 TT--T-ATAAGCCA--TG----------AG------C-T---TTT----TCC-T-T---C-C----A
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 I 6
s Peromyscus_maniculatus.KI615518.1                       4949772 28 -   8017169 tt--t-acacatca--tg----------cc------t-t---ttc----tGC-C-T---T-C----T
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    11913 29 -     36578 CT--G-AAAAATAG--TG----------ACT-----T-T---TTT---T-TC-C-T---C-C----A
i Petromus_typicus.PetTyp_scaffold_33007                C 0 I 6
s Phocoena_phocoena.PhoPho_flattened_line_11948            120703 20 -    122454 -ctct-gtgaatga--gg----------gc------t-t---cc-----------------------
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1987485                           1506 28 -      5908 tg--a-acaaacca--tg----------gc------t-t---ttc----tCC-C-T---T-C----A
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       2130 28 -     17985 tg--a-acaaacca--tg----------gc------t-t---ttc----tCC-C-T---T-C----A
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            1497 28 +      7694 tg--a-acaaacca--tg----------gc------t-t---ttc----tCC-C-T---T-C----A
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26739975 28 +  26888534 TG--A-ACAAACCA--TG----------GC------T-T---TTC----TCC-C-T---T-C----A
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            96881 15 +    112873 -ctcc-acatacca--ga----------t--------------------------------------
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 I 3
s Pithecia_albicans.k141_991845                             43107 28 -     61926 tc--t-atagatca--tg----------gc------t-c---ttc----tCC-C-G---C-C----G
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        24538 28 +     78826 tc--t-atagatca--tg----------gc------t-c---ttc----tCC-C-G---C-C----G
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              8487 28 -     15800 tc--t-atagatca--tg----------gc------t-c---ttc----tCC-C-G---C-C----G
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        11685 28 -     16101 tc--t-atagatca--tg----------gc------t-c---ttc----tCC-C-G---C-C----G
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          4994 28 +      9673 tc--t-atagatca--tg----------gc------t-c---ttc----tCC-C-G---C-C----G
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13473990 28 -  19735023 tc--t-atagatca--tg----------gc------t-c---ttc----tCC-C-G---C-C----G
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           12896 28 -     31692 tc--t-atagatca--tg----------gc------t-c---ttc----tCC-C-G---C-C----G
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           4783 20 +     21690 -ctct-gtgaatga--gg----------gc------t-t---cc-----------------------
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       22329 28 +     44506 tc--t-ataggtca--tg----------gc------t-c---ttc----tCC-C-G---C-C----G
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        22541 28 +     67491 TC--T-ATAAGTCA--TG----------GC------T-C---TTC----TCC-C-A---C-C----G
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      12780 28 -     98129 TC--T-ATAGGTCA--TG----------GC------T-C---TTC----TCC-C-G---C-C----G
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     22380 28 +    147771 tc--t-ataggtca--tg----------gc------t-c---ttc----tCC-C-G---C-C----G
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        22635 28 -     23762 tc--t-ataggtca--tg----------gc------t-c---ttc----tCC-C-G---C-C----G
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          3101 28 -     55515 TC--T-ATAGGTCA--TG----------GC------T-C---TTC----TCC-C-G---C-C----G
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         22454 28 +    152463 tc--t-ataggtca--tg----------gc------t-c---ttc----tCC-C-G---C-C----G
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                        171 28 -    119457 tc--t-ataggtca--tg----------gc------t-c---ttc----tCC-C-G---C-C----G
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         12176 28 +    134592 tc--t-ataggtca--tg----------gc------t-c---ttc----tCC-C-G---C-C----G
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          22764 28 -     75465 tc--t-ataggtca--tg----------gc------t-c---ttc----tCC-C-G---C-C----G
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              186656 28 -    373494 TG--T-ACAAATCA--TG----------GC------T-T---TTC----TCC-T-T---C-C----A
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19807304 28 +  19899266 tg--t-acaaatca--tg----------gc------t-t---ttc----tcc-c-t---c-c----A
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               5232 28 -     15069 tg--t-acaaacca--tg----------gc------t-t---ttc----tCC-C-T---T-C----A
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              5366 28 +     14865 tg--t-acaaacca--tg----------gc------t-t---ttc----tCC-C-T---T-C----A
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                76760  5 +     78963 tc--t-ac-----------------------------------------------------------
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 I 5
s Prolemur_simus.MPIZ01000048.1                           6848025 28 +  12164890 tc--t-acaaatcA--tg----------gc------t-c---ctc----tcc-c-t---c-c----c
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    667250 23 -   2312742 tg--t-acaaatca--tg----------gc------t-t---ctc----tct---------------
i Propithecus_coquerelli.NW_012147997.1                 C 0 I 6500
s Propithecus_coronatus.k141_1353159                         3077 28 +     11805 TG--T-ACAAATCA--TG----------GC------T-T---CTC----TCT-C-T---C-C----C
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           42414 28 +     52369 TG--T-ACAAATCA--TG----------GC------T-T---CTC----TCT-C-T---C-C----C
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         34802 28 -     44753 TG--T-ACAAATCA--TG----------GC------T-T---CTC----TCT-C-T---C-C----C
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            16724 28 +     27322 TG--T-ACAAATCA--TG----------GC------T-T---CTC----TCT-C-T---C-C----C
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       16359 28 -     53241 TG--T-ACAAATCA--TG----------GC------T-T---CTC----TCT-C-T---C-C----C
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         38631 28 -     48185 TG--T-ACAAATCA--TG----------GC------T-T---CTC----TCT-C-T---C-C----T
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           33704 16 +     77221 -----------------G----------TT------T-T---TTT----CAC-T-G---T-C----T
i Psammomys_obesus.NESX01026517.1                       I 10 I 5
s Pteronotus_parnellii.KE867983.1                            3249 29 -     27784 -cttt-ataaatca--g-g---------gc------t-a---ttc----ttt-a-t---t-c----c
i Pteronotus_parnellii.KE867983.1                       C 0 I 1
s Pteronura_brasiliensis.PteBra_flattened_line_1343        246022 29 -    344369 -tgcc-agaaatca--gg----------gc------t-t---ttc----tcc-t-t---t-c----c
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 I 1
s Pteropus_alecto.KB031157.1                             13245364  8 -  17261082 -ctct-acat---------------------------------------------------------
i Pteropus_alecto.KB031157.1                            C 0 I 12
s Pteropus_vampyrus.KN525959.1                             603314 25 -   3946241 -ctct-----atca--gg----------gc------t-t---ttc----tcc-t-t---t-g----t
i Pteropus_vampyrus.KN525959.1                          C 0 I 1
s Puma_concolor.QAVW01000427.1                          131533708 28 - 161321710 -tgct-acaaatca--g-----------gc------t-t---ttc----tcc-c-t---t-c----c
i Puma_concolor.QAVW01000427.1                          C 0 I 1
s Pygathrix_cinerea.k141_374971                             29350 28 +     56732 tg--t-acaaacca--tg----------gc------t-t---ttc----tCC-C-T---T-C----A
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6805841 28 +   6970761 tg--t-acaaacca--tg----------gc------t-t---ttc----tCC-C-T---T-C----A
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             5235 28 +     18040 tg--t-acaaacca--tg----------gc------t-t---ttc----tCC-C-T---T-C----A
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                15167  8 +     68503 -CTTT-ATGA---------------------------------------------------------
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 I 7
s Rattus_norvegicus.chr11                                13914999 22 +  90463843 at--t-acacatta--tc----------ac------a-t---tTT----CA----------------
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1787191 29 +   2252614 -ctct-acaaatca--gg----------gc------t-t---ttc----tcc-t-t---t-c----c
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 I 1
s Rhinopithecus_bieti.k119_1391695                           1463 28 -      1866 tg--t-acaaacca--tg----------gc------t-t---ttc----tCC-C-T---T-C----A
i Rhinopithecus_bieti.k119_1391695                      C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206377120 28 - 206558726 TG--T-ACAAACCA--TG----------GC------T-T---TTC----TCC-C-T---T-C----A
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44856020 28 -  45163003 tg--t-acaaacca--tg----------gc------t-t---ttc----tCC-C-T---T-C----A
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                18678 29 +    109198 -ctct-acatatca--gg----------gc------t-t---ttc----tcc-t-t---t-g----t
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 I 1
s Saiga_tatarica.SaiTat_scaffold_82192                       7330  8 +     12214 -CTCT-ATGA---------------------------------------------------------
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 I 7
s Saimiri_boliviensis.NW_024100938.1                     15672195 28 -  43202129 TC--T-ATAGATCA--TG----------GC------T-C---TTC----TCC-C-T---C-C----A
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        4112 28 +     34089 tc--t-atagatca--tg----------gc------t-c---ttc----tcc-c-t---c-c----A
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              4053 28 -     60842 tc--t-atagatca--tg----------gc------t-c---ttc----tcc-c-t---c-c----A
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              4148 28 +     67014 tc--t-atagatca--tg----------gc------t-c---ttc----tcc-c-t---c-c----A
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              4126 28 +     60816 tc--t-atagatca--tg----------gc------t-c---ctc----tcc-c-t---c-c----A
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 4063 28 -     76454 tc--t-atagatca--tg----------gc------t-c---ctc----tcc-c-t---c-c----A
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17340788 28 -  30362882 tc--t-atagatca--tg----------gc------c-c---ttc----tcc-c-t---c-c----G
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         20147 28 -     62485 tc--t-atagatca--tg----------gc------c-c---ttc----tCC-C-T---C-T----G
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   31676 23 -    114521 -c--t-acaaatca--gg----------ac------t-t---ttc----cct-t-------------
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        2847 28 +     15331 tg--t-acaaacca--tg----------gc------t-t---ttc----tCC-C-T---T-C----A
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       8244 28 +     20762 tg--t-acaaacca--tg----------gc------t-t---ttc----tCC-C-T---T-C----A
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         118246 28 +    130994 tg--t-acaaacca--tg----------gc------t-t---ttc----tCC-C-T---T-C----A
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           37033 28 +     46263 tg--t-acaaacca--tg----------gc------t-t---ttc----tCC-C-T---T-C----A
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     30147 28 +     42640 tg--t-acaaacca--tg----------gc------t-t---ttc----tCC-C-T---T-C----A
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        13191 28 +     30600 tg--t-acaaacca--tg----------gc------t-t---ttc----tCC-C-T---T-C----A
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   99730 28 -    120886 TT--T-ACACATCA--TG----------AC------T-G---TTT----TAC-T-C---T-C----A
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            18251 27 +    739146 -c-c--ataagtca--gt----------gc------t-t---ttC----CCT-T-G---T-G----C
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 I 2
s Spermophilus_dauricus.KZ294190.1                        2239204 23 +   2842873 tc--t-acaaatca--ca----------ac------a-t-----t----gct-c-t-----------
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             234143 29 -    276980 -tgct-agaaattg--ag----------gc------t-t---ttc----ccc-t-t---t-c----c
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 I 1
s Suricata_suricatta.SurSur_flattened_line_20339            26970 28 +     62062 -tgct-gcaaatca--a-----------gc------t-t---tcc----tcc-c-t---t-c----c
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 I 1
s Sus_scrofa.CM000824.4                                 189271240 29 + 218635234 -tttt-acaaacaa--gg----------gc------t-t---ttc----tct-t-t---t-c----t
i Sus_scrofa.CM000824.4                                 C 0 I 1
s Symphalangus_syndactylus.tarseq_24                        14405 28 -  13920577 tg--t-acaaatca--tg----------gc------t-t---ttc----tcc-c-t---c-c----A
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               5419 29 -      6213 -ttcc-accaccca--gg----------gc------c-t---tgc----ttc-t-t---t-c----c
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 I 1
s Tamandua_tetradactyla.TamTet_scaffold_26877               14124 14 +     45698 ------------------------------------T-C---TTT----CCT-C-T---CCC----T
i Tamandua_tetradactyla.TamTet_scaffold_26877           I 2 I 17
s Tapirus_indicus.TapInd_scaffold_176                      806262 29 +   1148477 -ctct-acaaatca--gg----------gg------t-t---ttc----tcc-t-t---t-c----c
i Tapirus_indicus.TapInd_scaffold_176                   C 0 I 1
s Tapirus_terrestris.TapTer_scaffold_14939                  56953 29 +     99546 -ctct-acaaatca--gg----------gg------t-t---ctc----tcc-t-t---t-c----c
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 I 1
s Tarsius_lariang.k141_609102                               25920 28 +     42269 tc--t-acaaatca--tg----------ac------c-t---atc----tcc-t-t---c-A----C
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               59236 28 +     65473 tc--t-acaaatca--tg----------ac------c-t---atc----tcc-t-t---c-A----C
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194007251 28 - 194193292 tg--t-acaaacca--gg----------gc------t-t---ttc----tcc-C-T---C-C----A
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             38733 32 -     47444 CC--T-ACAAACTG--TG----------CTT-----T-TTTTTTT---T-TC-C-T---C-C----A
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 I 6
s Tolypeutes_matacus.TolMat_scaffold_269431                  4944 30 +      6782 tc--t-caa-atcaaggt----------tc------t-t---ctc----cctcc-c---t-c----c
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 I 17
s Tonatia_saurophila.TonSau_scaffold_3334                  135251 29 -    259118 -cttt-ataaatca--g-g---------gc------t-t---ttc----tcc-t-t---t-c----c
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 I 1
s Trachypithecus_auratus.k141_738098                        26351 28 +     38948 tg--t-acaaacca--tg----------gc------t-t---ttc----tCC-C-T---T-C----A
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   20081 28 -     32910 tg--t-acaaacca--tg----------gc------t-t---ttc----tCC-C-T---T-C----A
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      1468 28 -     12939 tg--t-acaaacca--tg----------gc------t-t---ttc----tCC-C-T---T-C----A
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       1403 28 -     14244 tg--t-acaaacca--tg----------gc------t-t---ttc----tCC-C-T---T-C----A
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           42801 28 -     54611 tg--t-acaaacca--tg----------gc------t-t---ttc----tCC-C-T---T-C----A
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                         607 28 -     11566 tg--t-acaaacca--tg----------gc------t-t---ttc----tCC-C-T---T-C----A
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     2779 28 -     15592 tg--t-acaaacca--tg----------gc------t-t---ttc----tCC-C-T---T-C----A
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          1436 28 +     14371 tg--t-acaaacca--tg----------gc------t-t---ttc----tCC-C-T---T-C----A
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  51188 28 +     51589 tg--t-acaaacca--tg----------gc------t-t---ttc----tCC-C-T---T-C----A
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       14369 28 +     14732 tg--t-acaaacca--tg----------gc------t-t---ttc----tCC-C-T---T-C----A
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       4841 28 -     28054 tg--t-acaaacca--tg----------gc------t-t---ttc----tCC-C-T---T-C----A
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44659641 28 -  44834318 tg--t-acaaacca--tg----------gc------t-t---ttc----tCC-C-T---T-C----A
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       1944 28 +     13828 tg--t-acaaacca--tg----------gc------t-t---ttc----tCC-C-T---T-C----A
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   4546 24 +     90398 -CTCT-GTGAATGA--GG----------GCTTTTCTC-T----------------------------
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 I 5
s Trichechus_manatus.JH594618.1                          16081942  5 +  31416278 tc--t-ac-----------------------------------------------------------
i Trichechus_manatus.JH594618.1                         C 0 I 5
s Tupaia_chinensis.KB320831.1                             2792304 28 -   3938065 GC--T-CTAAGTGA--TG----------GC------T-T---TTC----TTC-C-T---C-C----C
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    4509 28 +     13056 TC--T-ATAAATGA--TG----------GC------T-T---TTC----TTC-C-T---C-C----C
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69312813 20 -  96451834 -ctct-gtgaatca--gg----------gc------t-t---cc-----------------------
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                    690 23 +     10241 -c--t-acaaatca--TA----------AA------A-T---TTC----CCT-T-------------
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6514165 17 +  28682327 -tgtt-acaaatca--gg----------gc------t------------------------------
i Ursus_maritimus.KK498671.1                            C 0 I 12
s Varecia_rubra.k141_432109                                  4715 28 -     20643 tc--t-acaaatca--tg----------gc------t-t---ctc----tcc-c-t---c-c----c
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             24256 28 -     33872 tc--t-acaaatcg--tg----------gc------t-t---ctc----tcc-c-t---c-c----c
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1524050 27 -   2331223 -c--t-ctcaaata--ga----------gc------t-t---ctc----tct-t-t---t-c----c
i Vicugna_pacos.KN269600.1                              C 0 I 1
s Vulpes_lagopus.VulLag_flattened_line_2045                137673 29 -    281493 -tgct-ataaatca--gg----------gc------t-t---ttc----tcc-t-t---t-c----c
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 I 1
s Xerus_inauris.XerIna_scaffold_7898                       126316 24 -    134049 tc--a-acaaatca--tg----------ac------t-t---t-t----tct-c-t-----------
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        213643 29 -    227762 -tgct-ataaatca--gg----------gc------t-t---ttc----tcc-t-t---t-c----c
i Zalophus_californianus.ZalCal_flattened_line_4097     I 164 I 62
s Zapus_hudsonius.ZapHud_scaffold_64392                     14403 17 -     20485 -------------g--t------------g------TTT---TTT----ATC-T-C---T-G----T
i Zapus_hudsonius.ZapHud_scaffold_64392                 I 296 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           6308 20 -      8775 -ctct-gtgaatga--gg----------gc------t-t---cc-----------------------
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Sorex_araneus.JH798170.1                               17750754 3364 -  27805282 I
e Erinaceus_europaeus.JH835290.1                         11531598 1064 +  16010500 I
e Elephantulus_edwardii.JH947210.1                        7804622 10712 +  15467074 I
e Hylobates_pileatus_a.tarseq_592                             33341 34 -     60944 I
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               11283 15 +    209709 ACAC------------A----C---------C------C--CC-T---CCCG
s Acinonyx_jubatus.LLWD01000356.1                         2033399 11 +   3721120 ----------------c----a--------ct------c--tc-c---tCT-
i Acinonyx_jubatus.LLWD01000356.1                       I 1 I 22
s Acomys_cahirinus.AcoCah_scaffold_1625                    112060  6 -    189883 ACAC------------A----C------------------------------
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10656704 11 +  23371972 ----------------c----a--------ct------c--tT-C---TCC-
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 12 I 18
s Ailurus_fulgens.LNAC01000003.1                          7094048 11 -  16596857 ----------------c----a--------ct------c--tt-c---TCC-
i Ailurus_fulgens.LNAC01000003.1                        I 4 I 19
s Allactaga_bullata.AllBul_scaffold_70162                   16328 14 -     22067 ACAC------------A----T---------T------C--CC-T---CCC-
i Allactaga_bullata.AllBul_scaffold_70162               C 0 I 17
s Allenopithecus_nigroviridis.k141_2469532                    770 15 -     60446 gCAC------------A----C---------C------C--CC-T---CCCG
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         1491 15 -     29318 GCAC------------A----C---------C------C--CC-T---CCCG
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                          428 15 +     38766 gCAC------------A----C---------C------C--CC-T---CCCG
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          1385 15 -     80423 gCAC------------A----C---------C------C--CC-T---CCCG
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             9681 15 -     18050 ACAC------------A----C---------C------C--CC-T---CCTG
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                 10774 15 -     11521 ACAC------------A----C---------C------C--CC-T---CCTG
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                             10358 15 -     21359 ACAC------------A----C---------C------C--CC-T---CCTG
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_298055                                 1655 15 +      1823 ACAC------------A----C---------C------C--CC-T---CCTG
i Alouatta_juara.k141_298055                            C 0 C 0
s Alouatta_macconnelli.k141_1331706                          9657 15 -     10438 ACAC------------A----C---------C------C--CC-T---CCTG
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            6313 15 +      7047 ACAC------------A----C---------C------C--CC-T---CCTG
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             9593 15 +     10410 ACAC------------A----C---------C------C--CC-T---CCTG
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            3401 15 -      4927 GCAC------------A----C---------C------C--CC-T---CCTG
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             6330 15 +      6429 ACAC------------A----C---------C------C--CC-T---CCTG
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3519523 11 +   4113121 ----------------c----t--------tc------c--tc-c---tct-
i Ammotragus_lervia.NIVO01013474.1                      I 7 I 18
s Anoura_caudifer.AnoCau_scaffold_422                      389728 11 -    631301 ----------------c----T---------C------C--TA-CC--TCC-
i Anoura_caudifer.AnoCau_scaffold_422                   I 1 I 18
s Antilocapra_americana.AntAmePen_scaffold_42841            30105 11 +     33004 ----------------C----TT--------C------C--AC-C---TCT-
i Antilocapra_americana.AntAmePen_scaffold_42841        I 7 I 18
s Aotus_azarae.k141_3170768                                 62048 10 +     78111 -------------------------------C------C--CCCT---CCTG
i Aotus_azarae.k141_3170768                             I 5 C 0
s Aotus_griseimembra.k141_3275623                            4989 10 +     22701 -------------------------------C------C--CCCT---CCTG
i Aotus_griseimembra.k141_3275623                       I 5 C 0
s Aotus_nancymaae.KZ196176.1                              5748946 10 +   9889416 -------------------------------C------C--CCCT---CCTG
i Aotus_nancymaae.KZ196176.1                            I 5 C 0
s Aotus_trivirgatus.k141_1740727                             5533 10 -    104377 -------------------------------C------C--CCCT---CCTG
i Aotus_trivirgatus.k141_1740727                        I 5 C 0
s Aotus_vociferans.k141_718647                               5535 10 +     23246 -------------------------------C------T--CCCT---CCTG
i Aotus_vociferans.k141_718647                          I 5 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     3146 15 +      5067 ACAT------------A----T--------GC------T--CC-T---CGC-
i Aplodontia_rufa.AprRuf_scaffold_156013                I 5 I 17
s Arctocebus_calabarensis.k141_587554                         381 17 +      9265 acaC------------C----C---------C------T--CT-T-GGGCTG
i Arctocebus_calabarensis.k141_587554                   C 0 I 1
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 8137 11 -     29036 ----------------T----G---------C------C--TA-CC--TCC-
i Artibeus_jamaicensis.ArtJam_scaffold_41619            I 1 I 18
s Ateles_geoffroyi_b.tarseq_2582                             9538789 15 +  39197703 ATAC------------A----C---------C------C--CC-T---CCTA
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             60060 15 +     85812 ATAC------------A----C---------C------C--CC-T---CCTA
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                11072 15 +     89302 ATAC------------A----C---------C------C--CC-T---CCTA
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             15577 15 -     58268 ATAC------------A----C---------C------C--CC-T---CCTA
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             63568 15 +    119057 ATAC------------A----C---------C------C--CC-T---CCTA
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               5537 15 -     25888 ATAC------------A----C---------C------C--CC-T---CCTA
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 6176 17 -     16375 A------------T-CC----TTCCCTCTCCC------C--C----------
i Avahi_laniger.k141_2840928                            C 0 I 5
s Avahi_peyrierasi.k141_2689020                              2496 17 +      2719 A------------T-CC----TTCCCTCTCCC------C--C----------
i Avahi_peyrierasi.k141_2689020                         C 0 I 5
s Balaenoptera_acutorostrata.KI537095.1                  26379553  7 +  51448160 --------------------------------------c--tc-c---tct-
i Balaenoptera_acutorostrata.KI537095.1                 C 0 I 18
s Balaenoptera_bonaerensis.DF502048.1                        4784  7 -     13118 --------------------------------------c--tc-c---tct-
i Balaenoptera_bonaerensis.DF502048.1                   C 0 I 18
s Beatragus_hunteri.BeaHun_scaffold_21644                   42586 11 -     72089 ----------------C----TT--------C------C--TC-C---TCT-
i Beatragus_hunteri.BeaHun_scaffold_21644               I 7 I 18
s Bison_bison.KN264915.1                                  6559260 11 +   6870073 ----------------C----TT--------C------C--TC-C---TCT-
i Bison_bison.KN264915.1                                I 7 I 18
s Bos_indicus.CM003021.1                                138139364 11 - 161108492 ----------------C----TT--------C------C--TC-C---TCT-
i Bos_indicus.CM003021.1                                I 7 I 18
s Bos_mutus.JH883513.1                                     571901 11 -    998990 ----------------C----TT--------C------C--TC-C---TCT-
i Bos_mutus.JH883513.1                                  I 7 I 18
s Bos_taurus.CM000177.6                                 136295097 11 - 158972876 ----------------C----TT--------C------C--TC-C---TCT-
i Bos_taurus.CM000177.6                                 I 7 I 18
s Bubalus_bubalis.KI419065.1                              1232180 11 -   1914593 ----------------C----GT--------C------C--TC-C---TCT-
i Bubalus_bubalis.KI419065.1                            I 7 I 18
s Cacajao_ayresi.k141_724503                               113427 15 -    171031 ACAC------------A----C---------C------C--CC-T---CCTG
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 12458 15 +    125063 ACAC------------A----C---------C------C--CC-T---CCTG
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                14503 15 -    216513 ACAC------------A----C---------C------C--CC-T---CCTG
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        7043 15 -    134917 ACAC------------A----C---------C------C--CC-T---CCTG
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3218971 11 -   8989139 ----------------a----t--------tc------C--TC-C---TCT-
i Camelus_bactrianus.KN276303.1                         I 1 I 47
s Camelus_dromedarius.KN271192.1                           396675 11 -  15254737 ----------------a----t--------tc------C--TC-C---TCT-
i Camelus_dromedarius.KN271192.1                        I 1 I 47
s Camelus_ferus.KB016973.1                                2972408 11 +   6889770 ----------------a----t--------tc------C--TC-C---TCT-
i Camelus_ferus.KB016973.1                              I 1 I 47
s CanFam4.chr31                                          11518863 11 +  39901454 ----------------c----a-C-------T------C--TT-C---TCC-
i CanFam4.chr31                                         I 1 I 18
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   13888 11 +     87036 ----------------c----a-C-------T------C--TT-C---TCC-
i Canis_lupus_VD.CanFam_VD_scaffold_16982               I 1 I 18
s Canis_lupus_dingo.QKWQ01001993.1                       11265530 11 -  35597290 ----------------c----a--------ct------c--TT-C---TCC-
i Canis_lupus_dingo.QKWQ01001993.1                      I 1 I 18
s Canis_lupus_familiaris.chr31                           11088064 11 +  39895921 ----------------c----a--------ct------c--TT-C---TCC-
i Canis_lupus_familiaris.chr31                          I 1 I 18
s Canis_lupus_orion.HG994411.1                           16455079 11 -  44759192 ----------------c----a--------ct------c--TT-C---TCC-
i Canis_lupus_orion.HG994411.1                          I 1 I 18
s Capra_aegagrus.CM003214.1                              21324599 11 + 157394656 ----------------C----TT--------C------C--TC-C---TCT-
i Capra_aegagrus.CM003214.1                             I 7 I 18
s Capra_hircus.CM004562.1                               135705826 11 - 157403528 ----------------C----TT--------C------C--TC-C---TCT-
i Capra_hircus.CM004562.1                               I 7 I 18
s Carlito_syrichta.NW_007248099.1                          308466 15 +    345090 ACAT------------a----c---------c------t--ct-t---ccct
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               58926 11 +     67245 ----------------G----G---------C------C--TA-CC--TCC-
i Carollia_perspicillata.CarPer_scaffold_4436           I 1 I 18
s Castor_canadensis.CasCan_scaffold_47037                   30154 10 +     33760 ACAT------------ATGCCT------------------------------
i Castor_canadensis.CasCan_scaffold_47037               I 11 I 21
s Catagonus_wagneri.CatWag_scaffold_1305                   158279 11 -    276539 ----------------C----TT--------C------C--TC-T---TCT-
i Catagonus_wagneri.CatWag_scaffold_1305                I 1 I 9
s Cavia_aperea.AVPZ01000278.1                            15786042  1 -  24422027 --------------------------------------------------N-
i Cavia_aperea.AVPZ01000278.1                           C 0 I 17
s Cavia_porcellus.DS562889.1                             15797976  1 -  24440124 --------------------------------------------------c-
i Cavia_porcellus.DS562889.1                            C 0 I 17
s Cavia_tschudii.CavTsc_scaffold_488                       176167  1 +    436027 --------------------------------------------------C-
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 I 17
s Cebus_albifrons.Contig22                               18890278  9 -  29618158 -------------------------------C------C--CC-T---CCTG
i Cebus_albifrons.Contig22                              I 5 C 0
s Cebus_olivaceus.k141_93739                                 7822  9 -     26817 -------------------------------C------C--CC-T---CCTG
i Cebus_olivaceus.k141_93739                            I 5 C 0
s Cebus_unicolor.k141_239009                                12062  9 +     25043 -------------------------------C------C--CC-T---CCTG
i Cebus_unicolor.k141_239009                            I 5 C 0
s Cephalopachus_bancanus.k141_702587                         7500 15 +     21754 ACAC------------A----C---------C------T--CT-T---CCCT
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4363281 11 +   7569818 ----------------c----a--------cc------c--TC-C---GCC-
i Ceratotherium_simum.JH767818.1                        I 1 I 18
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         3036 11 -      9338 ----------------c----a-C-------C------C--TC-C---GCC-
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    I 1 I 18
s Cercocebus_atys.KQ010443.1                              6554713 15 +   6739814 GCAC------------A----C---------C------C--CC-T---CCCG
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      26190 15 +     60454 GCAC------------A----C---------C------C--CC-T---CCCG
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          1395 15 -     21101 GCAC------------A----C---------C------C--CC-T---CCCG
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         58705 15 -    107033 gCAC------------A----C---------C------C--CC-T---CCCG
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        1597 15 -     17608 gcac------------a----g---------c------c--CC-T---CCCG
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          29092 15 +     30494 GCAC------------A----C---------C------C--CC-T---CCCG
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          57938 15 -     59240 GCAC------------A----C---------C------C--CC-T---CCCG
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          1639 15 +     16677 GCAC------------A----C---------C------C--CC-T---CCCG
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           23797 15 +     35983 GCAC------------A----C---------C------C--CC-T---CCCG
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11990325 15 +  12117833 gCAC------------A----C---------C------C--CC-T---CCCG
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46477083 15 +  46592721 gCAC------------A----C---------C------C--CC-T---CCCG
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      40634 15 -     45581 GCAC------------A----C---------C------C--CC-T---CCCG
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       1640 15 +     35577 gCAC------------A----C---------C------C--CC-T---CCCG
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        1416 15 -     25661 GCAC------------A----C---------C------C--CC-T---CCCG
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        1394 15 -     17744 GCAC------------A----C---------C------C--CC-T---CCCG
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        21010 15 +     37128 GCAC------------A----C---------C------C--CC-T---CCCG
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           58472  8 -     68416 ac-a------------T----T---------C------C--C----------
i Cheirogaleus_major.k141_1157592                       C 0 I 5
s Cheirogaleus_medius.k141_133808                            7515  8 +     13308 ac-a------------T----T---------T------C--C----------
i Cheirogaleus_medius.k141_133808                       C 0 I 5
s Cheracebus_lucifer.k141_619653                             5073 15 -     18223 ACAC------------A----C---------C------C--CC-T---CCTG
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             22096 15 +     25473 ACAC------------A----C---------C------C--CC-T---CCTG
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           41131 15 +     57117 ACAC------------A----C---------C------C--CC-T---CCTG
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          45810 15 +     54541 ACAC------------A----C---------C------C--CC-T---CCTG
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15961188  6 +  43084221 ATAC------------A----C------------------------------
i Chinchilla_lanigera.JH721867.1                        C 0 I 21
s Chiropotes_israelita.k141_1189915                         70634 15 +    196370 ACAC------------A----C---------C------C--CC-T---CCGG
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          14814 15 +     40510 ACAC------------A----C---------C------C--CC-T---CCGG
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15138556 15 -  15256731 gCAC------------A----C---------C------C--CC-T---CCCG
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      33603 15 -     53260 gCAC------------A----C---------C------C--CC-T---CCCG
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101144167 15 + 101219884 GCAC------------A----C---------C------C--CC-T---CCCG
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10885933 15 +  10971483 GCAC------------A----C---------C------C--CC-T---CCCG
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147664097 15 + 156195979 GCAC------------A----C---------C------C--CC-T---CCCG
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            16082 15 +     23629 GCAC------------A----C---------C------C--CC-T---CCCG
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60612900  9 +  78930452 ---------------------t---------t------c--cc-c---ttt-
i Condylura_cristata.JH655880.1                         C 0 I 23
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         39099 11 -     40477 ----------------c----a---------a------a--gacc---tct-
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     I 1 I 18
s Cricetomys_gambianus.CriGam_scaffold_949                 277982 14 -    399297 ACAC------------G----C---------C------A--TC-T---TCT-
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 I 17
s Cricetulus_griseus.LT883672.1                          53028652 14 +  72327488 ACAC------------A----C---------C------C--TC-T---CCT-
i Cricetulus_griseus.LT883672.1                         C 0 I 42
s Cryptoprocta_ferox.CryFer_flattened_line_19014            51415 11 -     70449 ----------------c----a-C-------T------C--TC-C---TTC-
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 1 I 18
s Ctenodactylus_gundi.CteGun_scaffold_447                  207604  4 -    956709 --------------------------------------------T---CCC-
i Ctenodactylus_gundi.CteGun_scaffold_447               I 4 I 17
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 30191  6 -     67205 ACAC------------A----C------------------------------
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 I 14
s Cuniculus_paca.CunPac_flattened_line_16637                17204  6 +     26546 GCAC------------A----C------------------------------
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 I 21
s Dasyprocta_punctata.DasPun_flattened_line_634             58290  6 -    236241 ACAC------------A----C------------------------------
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 I 21
s Daubentonia_madagascariensis.ctg11                     16844327  9 +  31942871 acaA------------C----C---------C------T--C----------
i Daubentonia_madagascariensis.ctg11                    I 11 I 5
s Delphinapterus_leucas.KZ290064.1                       80036231  7 -  96802777 --------------------------------------t--tc-c---tct-
i Delphinapterus_leucas.KZ290064.1                      C 0 I 18
s Desmodus_rotundus.KZ672188.1                           18698206 11 -  18957592 ----------------c----a---------c------c--ta-CC--TTC-
i Desmodus_rotundus.KZ672188.1                          I 1 I 18
s Dicerorhinus_sumatrensis.PEKH010003161.1                 321933 11 +    993696 ----------------c----a--------cc------c--tc-c---tcc-
i Dicerorhinus_sumatrensis.PEKH010003161.1              I 1 I 18
s Diceros_bicornis.DicBicMic_scaffold_9545                   2583 11 +    151128 ----------------c----a-C-------C------C--TC-C---GCC-
i Diceros_bicornis.DicBicMic_scaffold_9545              I 1 I 18
s Dinomys_branickii.DinBra_scaffold_1996                   156445  6 +    228994 ACAC------------A----C------------------------------
i Dinomys_branickii.DinBra_scaffold_1996                C 0 I 21
s Dipodomys_ordii.KN672545.1                              3655553  9 +   4240102 ATAT-------A-TG-C----C------------------------------
i Dipodomys_ordii.KN672545.1                            C 0 I 21
s Dipodomys_stephensi.DipSte_scaffold_44365                 27186  9 +     28912 ATAT-------A-TG-C----C------------------------------
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 I 21
s Dolichotis_patagonum.DolPat_scaffold_14102                35544  6 -     73477 AAAC------------A----A------------------------------
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 I 22
s Eidolon_helvum.KE772537.1                                 11629 11 +     24177 ----------------c----a---------t------c--aatc---tgc-
i Eidolon_helvum.KE772537.1                             I 1 I 18
s Elaphurus_davidianus.JRFZ01086400.1                     1490874 11 +   1727528 ----------------C----TT--------C------C--TC-C---TCT-
i Elaphurus_davidianus.JRFZ01086400.1                   I 7 I 18
s Ellobius_lutescens.LOEQ01003611.1                        239212 13 -    369425 ACA-------------A----A---------C------C--CC-T---CCT-
i Ellobius_lutescens.LOEQ01003611.1                     C 0 I 48
s Ellobius_talpinus.LOJH01090055.1                           6327 13 -      7838 ACA-------------A----C---------C------C--CC-T---CCT-
i Ellobius_talpinus.LOJH01090055.1                      C 0 I 47
s Enhydra_lutris.KZ291749.1                              85871564 11 +  99434291 ----------------c----a--------ct------c--tT-C---TCC-
i Enhydra_lutris.KZ291749.1                             I 1 I 19
s Eptesicus_fuscus.JH977687.1                             4703613  2 +   6522550 -------------------------------------------------TC-
i Eptesicus_fuscus.JH977687.1                           I 4 I 25
s Equus_asinus.JREZ01000062.1                             5852333 11 -   7175178 ----------------t----a--------tt------C--TC-C---TGC-
i Equus_asinus.JREZ01000062.1                           I 1 I 18
s Equus_caballus.CM000402.2                              13350836 11 +  41866177 ----------------t----a--------tt------C--TC-C---TGC-
i Equus_caballus.CM000402.2                             I 1 I 18
s Equus_przewalskii.ATBW01073585.1                          12326 11 +     92910 ----------------t----a--------tt------C--TC-C---TGC-
i Equus_przewalskii.ATBW01073585.1                      I 1 I 18
s Erythrocebus_patas.Contig8                             48770734 15 -  48907691 gCAC------------A----C---------C------C--CC-T---CCCG
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          314437  7 +    330699 --------------------------------------c--tc-c---tct-
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 I 18
s Eubalaena_japonica.EubJap_flattened_line_7756             60891  7 +     89355 --------------------------------------c--tc-c---tct-
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 I 18
s Eulemur_albifrons.k141_715837                              4518  9 +     13586 AC-A------------C----C---------C------C-TC----------
i Eulemur_albifrons.k141_715837                         C 0 I 5
s Eulemur_collaris.k141_311830                               4455  9 -      6809 AC-A------------C----C---------C------C-TC----------
i Eulemur_collaris.k141_311830                          C 0 I 5
s Eulemur_coronatus.k141_3240342                            10928  9 +     36558 aC-A------------C----C---------C------C-TC----------
i Eulemur_coronatus.k141_3240342                        C 0 I 5
s Eulemur_flavifrons.k141_903901                             7247  9 +     60246 aC-A------------C----C---------C------C-TC----------
i Eulemur_flavifrons.k141_903901                        C 0 I 5
s Eulemur_fulvus.k141_653297                                10726  9 +    109717 aC-A------------C----C---------C------C-TC----------
i Eulemur_fulvus.k141_653297                            C 0 I 5
s Eulemur_macaco.k141_1341545                               15109  9 +     16540 aC-A------------C----C---------C------C-TC----------
i Eulemur_macaco.k141_1341545                           C 0 I 5
s Eulemur_mongoz.k141_825972                                15382  9 +     27497 aC-A------------C----C---------C------C-TC----------
i Eulemur_mongoz.k141_825972                            C 0 I 5
s Eulemur_rubriventer.k141_411740                           17839  9 +     26808 ac-a------------C----C---------C------C-TC----------
i Eulemur_rubriventer.k141_411740                       C 0 I 5
s Eulemur_rufus.k141_1620292                                32574  9 +     46535 AC-A------------C----C---------C------C-TC----------
i Eulemur_rufus.k141_1620292                            C 0 I 5
s Eulemur_sanfordi.k141_186399                              15296  9 -     29447 AC-A------------C----C---------C------C-TC----------
i Eulemur_sanfordi.k141_186399                          C 0 I 5
s Felis_catus.CM001386.2                                129892375 11 - 159252932 ----------------c----a--------ct------c--tc-c---TCT-
i Felis_catus.CM001386.2                                I 1 I 22
s Felis_catus_fca126.CM031420.1                         129279444 11 - 158578461 ----------------c----a--------ct------c--tc-c---tCT-
i Felis_catus_fca126.CM031420.1                         I 1 I 22
s Felis_nigripes.FelNig_flattened_line_8080                 20589 11 +     52776 ----------------c----a-C-------T------C--TC-C---TCT-
i Felis_nigripes.FelNig_flattened_line_8080             I 1 I 22
s Galago_moholi.ctg555                                     210256 17 -    847004 acaC------------C----C---------C------T--CC-T-GGGATG
i Galago_moholi.ctg555                                  C 0 I 1
s Galago_senegalensis.k141_964197                           12635 17 -     43889 acaC------------C----C---------C------T--CC-T-GGGATG
i Galago_senegalensis.k141_964197                       C 0 I 1
s Galagoides_demidoff.k141_1769638                           9712 17 +     27357 acaC------------C----C---------C------T--CC-T-GGGATG
i Galagoides_demidoff.k141_1769638                      C 0 I 1
s Giraffa_tippelskirchi.LVKQ01S012154.1                    180671 11 -    189561 ----------------c----t--------tc------c--tc-c---tct-
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 7 I 18
s Galeopterus_variegatus.GalVar_scaffold_354               155735  4 +    324696 ACAC------------------------------------------------
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           12513 15 -     18683 CCAC------------A----TT--------C------T--CC-T---ACC-
i Glis_glis.GliGli_scaffold_79770                       C 0 I 17
s Gorilla_beringei.k141_111300                               4799 15 -     14630 ACAC------------A----C---------C------C--CC-T---CCCG
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119651898 15 - 195582420 ACAC------------A----C---------C------C--CC-T---CCCG
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   77058 15 +    118900 ccaC------------A----TT--------C------C--TC-T---CCC-
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 I 17
s Hapalemur_alaotrensis.k141_1280836                         1312  4 +     10286 ac-a------------C-----------------------------------
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_1254239                            9488  4 +      9690 ac-a------------C-----------------------------------
i Hapalemur_gilberti.k141_1254239                       C 0 C 0
s Hapalemur_griseus.k141_1387522                             5118  4 +     56096 ac-a------------C-----------------------------------
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        28368  4 -     42470 ac-a------------C-----------------------------------
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        44991  4 -     54384 ac-a------------C-----------------------------------
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              16621 11 +     53719 ----------------c----a-C-------T------C--TC-C---TCC-
i Helogale_parvula.HelPar_flattened_line_22962          I 1 I 18
s Hemitragus_hylocrius.HemHyl_scaffold_16669                26871 11 -     91191 ----------------C----TT--------C------C--TC-C---TCT-
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 7 I 18
s Heterocephalus_glaber.JH602058.1                        2550521  6 +  31725842 ACAC------------A----C------------------------------
i Heterocephalus_glaber.JH602058.1                      I 7 I 21
s Hippopotamus_amphibius.HipAmp_scaffold_1308              146523 11 +    277961 ----------------C----TT--------T------C--TC-C---TCT-
i Hippopotamus_amphibius.HipAmp_scaffold_1308           I 1 I 24
s Hipposideros_armiger.JXIK01001085.1                      277812 11 -    477199 ----------------c----a---------c------a--gaac---tcc-
i Hipposideros_armiger.JXIK01001085.1                   I 1 I 21
s Hipposideros_galeritus.HipGal_scaffold_104691              6964 11 -      9143 ----------------c----a---------c------a--gacc---tcc-
i Hipposideros_galeritus.HipGal_scaffold_104691         I 1 I 21
s Hoolock_leuconedys.ctg79                                      4205 15 -   7690867 ACAC------------A----C---------C------C--CC-T---CCCG
i Hoolock_leuconedys.ctg79                                 I 28 I 69
s Hyaena_hyaena.HyaHya_flattened_line_20729                 16704 11 -     67322 ----------------c----A-C-------T------C--TC-C---TCC-
i Hyaena_hyaena.HyaHya_flattened_line_20729             I 2 I 18
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           18429  4 -    119109 --------------------------------------------T---CCT-
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       I 6 I 18
s Hylobates_abbotti.k141_493872                              4631 15 +      5897 ACAC------------A----C---------C------C--CC-T---CCCA
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_624065                               1495 15 +      2112 ACAC------------A----C---------C------C--CC-T---CCCG
i Hylobates_agilis.k141_624065                          C 0 C 0
s Hylobates_klossii.k141_466549                             11071 15 +     11537 ACAC------------A----C---------C------C--CC-T---CCCG
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14624176 15 -  25970782 ACAC------------A----C---------C------C--CC-T---CCCG
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            1432 15 -      2977 ACAC------------A----C---------C------C--CC-T---CCCG
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     5597  4 +     22540 --------------------------------------------T---CCC-
i Hystrix_cristata.HysCri_scaffold_50788                I 6 I 17
s Ictidomys_tridecemlineatus.JH393315.1                   7125312  4 +  13083262 --------------------------------------------t---ccc-
i Ictidomys_tridecemlineatus.JH393315.1                 I 3 I 17
s Indri_indri.k141_4418183                                    942 15 -      1457 AC-ACAC----AC---C----C---------C------CGAC----------
i Indri_indri.k141_4418183                              C 0 I 5
s Inia_geoffrensis.IniGeo_flattened_line_66725               8431  7 +     17520 --------------------------------------c--tc-c---tct-
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 I 18
s Jaculus_jaculus.JH725517.1                              8565339 14 +  11848649 ACAT------------A----T---------C------C--CC-T---CCT-
i Jaculus_jaculus.JH725517.1                            C 0 I 17
s Kogia_breviceps.KogBre_flattened_line_35920               23047  7 +     37189 --------------------------------------t--tc-c---tct-
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 I 18
s Lagothrix_lagothricha.k141_12968                          49657 15 -    147782 aCAC------------A----C---------C------C--TC-T---CCTA
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   113696 10 -    115756 ----------------c----a---------C------T--TG-C---CTC-
i Lasiurus_borealis.LasBor_scaffold_5102                I 1 I 24
s Lepilemur_ankaranensis.k141_884009                        23435  4 +     39228 ------------------------------------------------CCCA
i Lepilemur_ankaranensis.k141_884009                    I 4 I 1
s Lepilemur_dorsalis.k141_134267                            52810  4 +     63517 ------------------------------------------------CTCA
i Lepilemur_dorsalis.k141_134267                        I 4 I 1
s Lepilemur_septentrionalis.k141_578524                     31074  4 -     33031 ------------------------------------------------CCCA
i Lepilemur_septentrionalis.k141_578524                 I 4 I 1
s Lemur_catta.scaffold_1                                258406672  3 - 285822530 ac-a------------------------------------------------
i Lemur_catta.scaffold_1                                C 0 I 1
s Lepilemur_ruficaudatus.k141_617879                        78056 11 +    116806 AC-C------------T----C-CC-----AC------C--C----------
i Lepilemur_ruficaudatus.k141_617879                    C 0 I 5
s Leptonychotes_weddellii.KB714749.1                      3085379 10 -   3498232 ----------------c----a--------ct------c--ct-C---TC--
i Leptonychotes_weddellii.KB714749.1                    I 1 I 49
s Lepus_americanus.LepAme_scaffold_62849                    12707 14 +     22452 AGAT------------C----C---------T------C--CA-T---TGT-
i Lepus_americanus.LepAme_scaffold_62849                C 0 I 13
s Lipotes_vexillifer.KE558548.1                            135384  7 +   3060487 --------------------------------------c--tc-c---tct-
i Lipotes_vexillifer.KE558548.1                         C 0 I 18
s Lophocebus_aterrimus.ctg55                             19247802 15 +  19376315 gCAC------------A----C---------C------C--CC-T---CCCG
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           10029 17 +     84689 acaC------------C----C---------A------T--CC-T-GGCCTG
i Loris_lydekkerianus.k141_550999                       C 0 I 1
s Loris_tardigradus.ctg97                                 3777778 17 +   6799190 acaC------------C----C---------A------T--CC-T-GGCCTG
i Loris_tardigradus.ctg97                               C 0 I 1
s Lycaon_pictus.CM007556.1                               11087520 11 +  39895028 ----------------c----a--------ct------c--TT-C---TCC-
i Lycaon_pictus.CM007556.1                              I 1 I 18
s Macaca_arctoides.k141_2201161                             19542 15 +     74745 gCAC------------A----C---------C------C--CC-T---CCCG
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12705998 15 +  12821369 gCAC------------A----C---------C------C--CC-T---CCCG
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                1643 15 -      3136 GCAC------------A----C---------C------C--CC-T---CCCG
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           46460 15 +     63263 gCAC------------A----C---------C------C--CC-T---CCCG
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                 1163 15 -      2568 GCAC------------A----C---------C------C--CC-T---CCCG
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 1749 15 -      7381 GCAC------------A----C---------C------C--CC-T---CCCG
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  44967 15 -     79256 gCAC------------A----C---------C------C--CC-T---CCCG
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196035075 15 + 196197964 GCAC------------A----C---------C------C--CC-T---CCCG
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11445243 15 +  11645122 GCAC------------A----C---------C------C--CC-T---CCCG
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   3914 15 -     46448 GCAC------------A----C---------C------C--CC-T---CCCG
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                1586 15 -     13212 GCAC------------A----C---------C------C--CC-T---CCCG
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 15267 15 -     55006 gCAC------------A----C---------C------C--CC-T---CCCG
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43840384 15 +  43892939 gCAC------------A----C---------C------C--CC-T---CCCG
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               16553 15 -     24607 GCAC------------A----T---------C------C--CC-T---CCCG
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               3919 15 -     27140 GCAC------------A----C---------C------C--CC-T---CCCG
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                701002 11 +    802869 ----------------c----a---------t------c--aatc---tcc-
i Macroglossus_sobrinus.MacSob_scaffold_879             I 1 I 18
s Mandrillus_leucophaeus.scaffold125                     43436961 15 -  43563597 gCAC------------A----C---------C------C--CC-T---CCCG
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4449787 15 -   4543643 gCAC------------A----C---------C------C--CC-T---CCCG
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            145065 11 +    252755 ----------------c----a-C-------C------C--TC-T---TAC-
i Manis_javanica.JSZB01003966.1                         I 1 I 17
s Manis_pentadactyla.KN017078.1                             35140 11 +     58827 ----------------c----a-C-------C------C--TC-T---TAC-
i Manis_pentadactyla.KN017078.1                         I 1 I 18
s Marmota_marmota.CZRN01000005.1                         36873147  7 +  64221397 --------------------------------------c--tc-t---tcc-
i Marmota_marmota.CZRN01000005.1                        C 0 I 17
s Megaderma_lyra.MegLyr_scaffold_3562                       63819 11 -    234502 ----------------T----G---------T------G--GGCC---TCC-
i Megaderma_lyra.MegLyr_scaffold_3562                   I 1 I 18
s Mellivora_capensis.MelCap_flattened_line_15433              378 11 -     87323 ----------------t----a-C-------T------C--TT-C---TCC-
i Mellivora_capensis.MelCap_flattened_line_15433        I 1 I 19
s Meriones_unguiculatus.MerUng_scaffold_52233               12173  8 +     15977 -------------------------------T------C--TC-T---CCT-
i Meriones_unguiculatus.MerUng_scaffold_52233           I 5 I 17
s Mesocricetus_auratus.KB708139.1                         1046358 14 -  26018355 ACAC------------A----C---------C------C--TC-T---CCT-
i Mesocricetus_auratus.KB708139.1                       C 0 I 48
s Microcebus_murinus.CM007691.1                          16509682  8 +  47401472 ac-a------------c----t---------c------C--C----------
i Microcebus_murinus.CM007691.1                         C 0 I 5
s Micronycteris_hirsuta.MicHir_scaffold_37978               22110 11 -     32043 ----------------c----G---------C------C--TG-CC--TCC-
i Micronycteris_hirsuta.MicHir_scaffold_37978           I 1 I 18
s Microtus_ochrogaster.CM001673.1                        22819507 16 -  98408828 GTA-------------A----C---------C------C--CC-TCCTCCT-
i Microtus_ochrogaster.CM001673.1                       C 0 I 48
s Miniopterus_natalensis.LDJU01000022.1                   8209107 11 +  10048721 ----------------C----A---------C------C--CG-CC--TCC-
i Miniopterus_natalensis.LDJU01000022.1                 I 1 I 18
s Miniopterus_schreibersii.MinSch_scaffold_24116            33759 11 +     45743 ----------------c----a---------c------c--cg-c--ctcc-
i Miniopterus_schreibersii.MinSch_scaffold_24116        I 1 I 18
s Miopithecus_ogouensis.k141_2935907                         1514 15 +     29742 GCAC------------A----C---------C------C--CC-T---CCCG
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        10892 10 -    104932 ----------------c----aT--------T------C--CT-C---TC--
i Mirounga_angustirostris.MirAng_flattened_line_8852    I 1 I 49
s Mirza_zaza.k141_226143                                     5072  8 +      8497 ac-a------------C----T---------C------C--C----------
i Mirza_zaza.k141_226143                                C 0 I 5
s Monodon_monoceros.MonMon_M_scaffold_5598                 145819  7 +    154973 --------------------------------------t--tc-c---tct-
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 I 18
s Mormoops_blainvillei.MorMeg_scaffold_2952                160622 11 +    265003 ----------------c----a---------C------C--TA-CC--TCC-
i Mormoops_blainvillei.MorMeg_scaffold_2952             I 2 I 18
s Moschus_moschiferus.MosMos_scaffold_78805                   417 11 -     19904 ----------------C----TT--------C------C--TC-C---TCT-
i Moschus_moschiferus.MosMos_scaffold_78805             I 7 I 18
s Mungos_mungo.MunMun_flattened_line_8729                  144317 11 -    168139 ----------------c----a-C-------T------C--TC-C---TCC-
i Mungos_mungo.MunMun_flattened_line_8729               I 1 I 18
s Murina_feae.MurFea_scaffold_2254                          18980 10 -    100666 ----------------c----a---------C------C--TA-C---CTT-
i Murina_feae.MurFea_scaffold_2254                      I 1 I 21
s Mus_caroli.LT608236.1                                  70766017 14 +  92629107 ACAC------------A----T---------T------C--TC-T---CCT-
i Mus_caroli.LT608236.1                                 C 0 I 17
s Mus_musculus.chr16                                     75489079 14 +  98207768 ACAC------------A----T---------T------C--TC-T---CCT-
i Mus_musculus.chr16                                    C 0 I 17
s Mus_pahari.LT608305.1                                  67555302 14 +  89017189 ACAC------------A----T---------T------C--TC-T---CCT-
i Mus_pahari.LT608305.1                                 C 0 I 17
s Mus_spretus.CM004110.1                                 74330257 14 +  97876770 ACAC------------A----T---------T------C--TC-T---CCT-
i Mus_spretus.CM004110.1                                C 0 I 17
s Muscardinus_avellanarius.MusAve_scaffold_9643             11082 15 +     98495 CCAC------------T----T--------AG------C--AC-T---CCC-
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 I 17
s Mustela_putorius.JH417978.1                             4423743 11 -  28371801 ----------------c----a--------ct------c--tT-C---TCC-
i Mustela_putorius.JH417978.1                           I 1 I 19
s Myocastor_coypus.MyoCoy_scaffold_3653                     89473  6 -    117718 ACAT------------A----A------------------------------
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 I 14
s Myotis_brandtii.KE161952.1                               967273 10 +   8389877 ----------------c----a---------C------C--TG-C---CTC-
i Myotis_brandtii.KE161952.1                            I 1 I 25
s Myotis_davidii.KB114863.1                               5018949 10 +   6462685 ----------------c----a---------c------c--tg-c---ctc-
i Myotis_davidii.KB114863.1                             I 1 I 25
s Myotis_lucifugus.GL429887.1                             3464853 10 -   3747815 ----------------c----a---------C------C--TG-C---CTC-
i Myotis_lucifugus.GL429887.1                           I 1 I 25
s Myotis_myotis.MyoMyo_scaffold_6123                        10068 10 +     66751 ----------------c----a---------C------C--TG-C---CTC-
i Myotis_myotis.MyoMyo_scaffold_6123                    I 1 I 25
s Nannospalax_galili.KL201303.1                            117878 14 +    362372 ATAC------------A----T---------G------C--TC-T---CCA-
i Nannospalax_galili.KL201303.1                         C 0 I 17
s Nasalis_larvatus.k141_153429                               8015 15 +     48152 GCAC------------A----C---------C------C--CC-T---CCTG
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4484284 10 -  14209539 ----------------c----a--------ct------c--ct-c---tc--
i Neomonachus_schauinslandi.NINY01007774.1              I 1 I 49
s Neophocaena_asiaeorientalis.KZ688543.1                  3950434  7 -   4490290 --------------------------------------t--tc-c---tct-
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 I 18
s Noctilio_leporinus.NocLep_scaffold_12062                  48723 11 +     94413 ----------------T----G---------C------C--TA-CC--TCC-
i Noctilio_leporinus.NocLep_scaffold_12062              I 1 I 18
s Nomascus_annamensis.k141_302224                            1473 15 +      1516 ACAC------------A----C---------C------C--CC-T---CCCG
i Nomascus_annamensis.k141_302224                       C 0 C 0
s Nomascus_concolor.k141_226614                               733 15 -      5092 ACAC------------A----C---------C------C--CC-T---CCCG
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_642452                            1516 15 +      2851 ACAC------------A----C---------C------C--CC-T---CCCG
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             24451 15 -  18771707 ACAC------------A----C---------C------C--CC-T---CCCG
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  2154 15 +      4512 ACAC------------A----C---------C------C--CC-T---CCCG
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                30325 11 +   3668941 ----------------c----a--------ct------c--TT-C---TCC-
i Nyctereutes_procyonoides.CAJHUB010000786.1            I 1 I 18
s Nycticebus_bengalensis.LG16                            65566463 17 -  95554990 acaC------------G----C---------G------T--CC-T-GGCCTG
i Nycticebus_bengalensis.LG16                           C 0 I 1
s Nycticebus_coucang.k141_2051882                            3192 17 +      6470 acaC------------G----C---------G------T--CC-T-GGCCTG
i Nycticebus_coucang.k141_2051882                       C 0 I 1
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65668801 17 +  89412551 acaC------------G----C---------G------T--CC-T-GGCCTG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 I 1
s Ochotona_princeps.JH802095.1                            4995496 14 -  23139505 agaa------------a----t---------t------t--ta-t---ttt-
i Ochotona_princeps.JH802095.1                          C 0 I 12
s Octodon_degus.JH651621.1                                3685015  6 +  10294119 ATAC------------A----C------------------------------
i Octodon_degus.JH651621.1                              C 0 I 14
s Odobenus_rosmarus.KB229587.1                            1048402 11 +   1475581 ----------------c----a--------ct------c--tT-C---TCC-
i Odobenus_rosmarus.KB229587.1                          I 30 I 73
s Odocoileus_virginianus.KZ101650.1                       1079105 11 +   1425656 ----------------C----T-C-------C------C--TC-C---TCT-
i Odocoileus_virginianus.KZ101650.1                     I 7 I 18
s Okapia_johnstoni.LVCL01S0017931.1                         36399 11 +     78940 ----------------c----t--------tc------c--tc-c---tct-
i Okapia_johnstoni.LVCL01S0017931.1                     I 7 I 18
s Ondatra_zibethicus.OndZib_scaffold_6821                  124764 13 +    145789 ATA-------------A----C---------C------C--CC-T---CCT-
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 I 47
s Onychomys_torridus.OnyTor_scaffold_12578                  36564 14 +     62360 ACCT------------A----C---------C------C--TC-T---CCT-
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 I 17
s Orcinus_orca.KB316965.1                                 7224116  7 -   7562323 --------------------------------------t--tc-c---tct-
i Orcinus_orca.KB316965.1                               C 0 I 18
s Oryctolagus_cuniculus.CM000803.1                      141875749 14 + 163896628 agaT------------C----C---------T------C--CA-T---CGT-
i Oryctolagus_cuniculus.CM000803.1                      C 0 I 13
s Otocyon_megalotis.JAEUCK010005121.1                      307606 11 -    505867 ----------------c----a--------ct------c--TT-C---TCC-
i Otocyon_megalotis.JAEUCK010005121.1                   I 1 I 18
s Otolemur_crassicaudatus.k141_321880                       38361 17 +     38679 acaC------------C----T---------C------T--CC-T-GGGATG
i Otolemur_crassicaudatus.k141_321880                   C 0 I 1
s Otolemur_garnettii.GL873528.1                          18007788 17 -  38779656 ACAT------------C----C---------C------T--CC-T-GGGATG
i Otolemur_garnettii.GL873528.1                         C 0 I 1
s Ovis_aries.CM001582.2                                 134076665 11 - 275406953 ----------------c----t--------tc------c--tc-c---tct-
i Ovis_aries.CM001582.2                                 I 7 I 18
s Ovis_canadensis.OviCan_scaffold_6251                      77879 11 +    140051 ----------------C----TT--------C------C--TC-C---TCT-
i Ovis_canadensis.OviCan_scaffold_6251                  I 7 I 18
s Pan_paniscus.CM003386.1                               127574159 15 - 205426864 ACAC------------A----C---------C------C--CC-T---CCCG
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120151312 15 - 196562556 ACAC------------A----C---------C------C--CC-T---CCCG
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_tigris.KE721879.1                              5027152 11 -   6340057 ----------------c----a--------ct------C--TC-C---TCT-
i Panthera_tigris.KE721879.1                            I 1 I 22
s Pantholops_hodgsonii.KE114631.1                         1065525 11 -   1292953 ----------------C----TT--------C------C--TC-C---TCT-
i Pantholops_hodgsonii.KE114631.1                       I 7 I 18
s Papio_anubis.CM001492.2                               188155752 15 - 188283584 GCAC------------A----C---------C------C--C-CT---CCCG
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             4069 15 +      5367 GCAC------------A--C-C---------C------C--C--T---CCCA
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47513140 14 +  47705337 gCAC------------A----C---------C------C--C--T---CCCG
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 67118 14 -    104429 gCAC------------A----C---------C------C--C--T---CCCG
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    5650 14 +     14967 GCAC------------A----C---------C------C--C--T---CCCG
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 1511 14 -      7628 GCAC------------A----C---------C------C--C--T---CCCG
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    115191 11 -    135482 ----------------c----a-C-------T------C--TC-C---TCC-
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 I 1 I 18
s Perodicticus_ibeanus.k141_117958                           4776 17 -     23713 acaC------------C----C---------C------T--CC-T-GGGCTG
i Perodicticus_ibeanus.k141_117958                      C 0 I 1
s Perodicticus_potto.k141_713187                            24085 17 -     27972 acaC------------C----C---------C------T--CC-T-GGGCTG
i Perodicticus_potto.k141_713187                        C 0 I 1
s Perognathus_longimembris.PerPac_flattened_line_22291      43065  4 -     45160 --------------------------------------------C---TCC-
i Perognathus_longimembris.PerPac_flattened_line_22291  I 6 I 17
s Peromyscus_maniculatus.KI615518.1                       4949800 14 -   8017169 ACCT------------A----T---------G------T--TC-T---CCT-
i Peromyscus_maniculatus.KI615518.1                     C 0 I 17
s Petromus_typicus.PetTyp_scaffold_33007                    11948  4 -     36578 --------------------------------------------A---CCC-
i Petromus_typicus.PetTyp_scaffold_33007                I 6 I 16
s Phocoena_phocoena.PhoPho_flattened_line_11948            120723  7 -    122454 --------------------------------------t--tc-c---tct-
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 I 18
s Piliocolobus_badius.k141_1987485                           1534 15 -      5908 GCAC------------A----C---------C------C--CC-T---CCCG
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       2158 15 -     17985 GCAC------------A----C---------C------C--CC-T---CCTG
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            1525 15 +      7694 GCAC------------A----C---------C------C--CC-T---CCTG
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26740003 15 +  26888534 GCAC------------A----C---------C------C--CC-T---CCCG
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            96899 10 +    112873 ----------------c----a---------t------t--tg-c---ctc-
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        I 3 I 25
s Pithecia_albicans.k141_991845                             43135 15 -     61926 ACAC------------A----T---------C------C--CC-T---CCTG
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        24566 15 +     78826 ACAC------------A----T---------C------C--CC-T---CCTG
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              8515 15 -     15800 ACAC------------A----T---------C------C--CC-T---CCTG
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        11713 15 -     16101 ACAC------------A----T---------C------C--CC-T---CCTG
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          5022 15 +      9673 ACAC------------A----T---------C------C--CC-T---CCTG
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13474018 15 -  19735023 ACAC------------A----T---------C------C--CC-T---CCTG
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           12924 15 -     31692 ACAC------------A----T---------C------C--CC-T---CCTG
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           4803  7 +     21690 --------------------------------------c--tc-c---tct-
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 I 18
s Plecturocebus_bernhardi.k141_959214                       22357 15 +     44506 ACAC------------A----C---------C------C--CC-T---CCTG
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        22569 15 +     67491 ACAC------------A----C---------C------C--CC-T---CCTG
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      12808 15 -     98129 ACAC------------A----C---------C------C--CC-T---CCTG
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     22408 15 +    147771 ACAC------------A----C---------C------C--CC-T---CCTG
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        22663 15 -     23762 ACAC------------A----C---------C------C--CC-T---CCTG
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          3129 15 -     55515 ACAC------------A----C---------C------C--CC-T---CCTG
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         22482 15 +    152463 ACAC------------A----C---------C------C--CC-T---CCTG
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                        199 15 -    119457 ACAC------------A----C---------C------C--CC-T---CCTG
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         12204 15 +    134592 ACAC------------A----C---------C------C--CC-T---CCTG
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          22792 15 -     75465 ACAC------------A----C---------C------C--CC-T---CCTG
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              186684 15 -    373494 ACAC------------A----C---------C------C--CC-T---CCTG
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19807332 15 +  19899266 ACAC------------A----C---------C------C--CC-T---CCTG
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               5260 15 -     15069 GCAC------------A----C---------C------C--CC-T---CCCG
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              5394 15 +     14865 GCAC------------A----C---------C------C--CC-T---CCCG
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6848053  4 +  12164890 ac-a------------c-----------------------------------
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coronatus.k141_1353159                         3105  9 +     11805 C------GC-------C----G--------AC------C--C----------
i Propithecus_coronatus.k141_1353159                    C 0 I 5
s Propithecus_diadema.k141_577245                           42442  8 +     52369 C----------AC---C----G---------C------C--C----------
i Propithecus_diadema.k141_577245                       C 0 I 5
s Propithecus_edwardsi.k141_1317105                         34830  8 -     44753 C---CC----------C----G---------C------C--C----------
i Propithecus_edwardsi.k141_1317105                     C 0 I 5
s Propithecus_perrieri.k141_7554                            16752  8 +     27322 C----------AC---C----G---------C------C--C----------
i Propithecus_perrieri.k141_7554                        C 0 I 5
s Propithecus_tattersalli.k141_907138                       16387  8 -     53241 C---CC----------C----G---------C------C--C----------
i Propithecus_tattersalli.k141_907138                   C 0 I 5
s Psammomys_obesus.NESX01026517.1                           33725  8 +     77221 -------------------------------T------C--TC-T---CCT-
i Psammomys_obesus.NESX01026517.1                       I 5 I 17
s Propithecus_verreauxi.k141_158021                         38659 14 -     48185 C---CCCGCCCACTGTC-----------------------------------
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Pteronotus_parnellii.KE867983.1                            3279 11 -     27784 ----------------t----a---------C------C--TA-CC--TCC-
i Pteronotus_parnellii.KE867983.1                       I 1 I 18
s Pteronura_brasiliensis.PteBra_flattened_line_1343        246052 11 -    344369 ----------------c----a-C-------T------C--TT-C---TCC-
i Pteronura_brasiliensis.PteBra_flattened_line_1343     I 1 I 19
s Pteropus_alecto.KB031157.1                             13245384 11 -  17261082 ----------------c----a---------t------c--aatg---tcc-
i Pteropus_alecto.KB031157.1                            I 12 I 18
s Pteropus_vampyrus.KN525959.1                             603340 11 -   3946241 ----------------c----a---------t------c--aatc---tcc-
i Pteropus_vampyrus.KN525959.1                          I 1 I 18
s Puma_concolor.QAVW01000427.1                          131533737 11 - 161321710 ----------------c----a--------ct------c--tc-c---tCT-
i Puma_concolor.QAVW01000427.1                          I 1 I 22
s Pygathrix_cinerea.k141_374971                             29378 15 +     56732 GCAC------------A----C---------C------C--CC-T---CCCG
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6805869 15 +   6970761 GCAC------------A----C---------C------C--CC-T---CCCG
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             5263 15 +     18040 GCAC------------A----C---------C------C--CC-T---CCCG
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                15182 11 +     68503 ----------------C----TT--------C------C--TC-C---TCT-
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 7 I 18
s Rattus_norvegicus.chr11                                13915021 13 +  90463843 -CAC------------A----C---------T------C--TC-T---CCT-
i Rattus_norvegicus.chr11                               C 0 I 17
s Rhinolophus_sinicus.LVEH01000179.1                      1787221 11 +   2252614 ----------------c----a---------a------a--gacc---tcc-
i Rhinolophus_sinicus.LVEH01000179.1                    I 1 I 49
s Rhinopithecus_bieti.k119_1391695                           1491 15 -      1866 GCAC------------A----C---------C------C--CC-T---CCCA
i Rhinopithecus_bieti.k119_1391695                      C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206377148 15 - 206558726 GCAC------------A----C---------C------C--CC-T---CCCG
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44856048 15 -  45163003 GCAC------------A----C---------C------C--CC-T---CCCA
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                18708 11 +    109198 ----------------c----a---------t------c--aatc---tcc-
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            I 1 I 18
s Saiga_tatarica.SaiTat_scaffold_82192                       7345 11 +     12214 ----------------C----TT--------C------A--TC-C---TCT-
i Saiga_tatarica.SaiTat_scaffold_82192                  I 7 I 18
s Saimiri_boliviensis.NW_024100938.1                     15672223 15 -  43202129 ACAC------------A----C---------C------C--CC-T---CCTG
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        4140 15 +     34089 ACAC------------A----C---------C------C--CC-T---CCTG
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              4081 15 -     60842 ACAC------------A----C---------C------C--CC-T---CCTG
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              4176 15 +     67014 ACAC------------A----C---------C------C--CC-T---CCTG
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              4154 15 +     60816 ACAC------------A----C---------C------C--CC-T---CCTG
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 4091 15 -     76454 ACAC------------A----C---------C------C--GC-T---CCTG
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17340816 15 -  30362882 ACAC------------A----C---------C------C--CC-T---CCTG
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         20175 15 -     62485 ACAC------------A----C---------C------C--CC-T---CCTG
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   31699  9 -    114521 ---------------------t---------c------c--TG-C---TTT-
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 I 22
s Semnopithecus_entellus.k141_1572367                        2875 15 +     15331 GCAC------------A----C---------C------C--CC-T---CCCG
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       8272 15 +     20762 GCAC------------A----C---------C------C--CC-T---CCCG
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         118274 15 +    130994 GCAC------------A----C---------C------C--CC-T---CCCA
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           37061 15 +     46263 GCAC------------A----C---------C------C--CC-T---CCCG
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     30175 15 +     42640 GCAC------------A----C---------C------C--CC-T---CCCG
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        13219 15 +     30600 GCAC------------A----C---------C------C--CC-T---CCCG
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   99758 14 -    120886 ACTA------------A----A---------C------C--TC-T---CCA-
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 I 17
s Solenodon_paradoxus.SolPar_flattened_line_1012            18280 16 +    739146 TTAC---------T-AC----T---------C------C--TC-T---TTT-
i Solenodon_paradoxus.SolPar_flattened_line_1012        I 2 I 17
s Spermophilus_dauricus.KZ294190.1                        2239227  7 +   2842873 --------------------------------------c--tc-t---ccc-
i Spermophilus_dauricus.KZ294190.1                      C 0 I 17
s Spilogale_gracilis.SpiGra_flattened_line_905             234173 11 -    276980 ----------------c----aT--------C------C--AT-C---ACC-
i Spilogale_gracilis.SpiGra_flattened_line_905          I 1 I 19
s Suricata_suricatta.SurSur_flattened_line_20339            26999 11 +     62062 ----------------c----a-C-------T------C--TC-C---TCC-
i Suricata_suricatta.SurSur_flattened_line_20339        I 1 I 18
s Sus_scrofa.CM000824.4                                 189271270 11 + 218635234 ----------------c----t--------tc------C--TC-T---TCT-
i Sus_scrofa.CM000824.4                                 I 1 I 18
s Symphalangus_syndactylus.tarseq_24                        14433 15 -  13920577 ACAC------------A----C---------C------C--CC-T---CCCG
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               5449 10 -      6213 ----------------c----a---------c------c--ta-c---tgc-
i Tadarida_brasiliensis.TadBra_scaffold_145589          I 1 I 80
s Tapirus_indicus.TapInd_scaffold_176                      806292 11 +   1148477 ----------------c----a-C-------T------C--TC-C---TCT-
i Tapirus_indicus.TapInd_scaffold_176                   I 1 I 18
s Tapirus_terrestris.TapTer_scaffold_14939                  56983 11 +     99546 ----------------c----a-C-------T------C--TC-C---TCC-
i Tapirus_terrestris.TapTer_scaffold_14939              I 1 I 18
s Tarsius_lariang.k141_609102                               25948 15 +     42269 ACAC------------A----C---------C------T--CT-T---CCCT
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               59264 15 +     65473 ACAC------------A----C---------C------T--CT-T---CCCT
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194007279 15 - 194193292 GCAC------------A----C---------C------C--CC-T---CCCG
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             38771  4 -     47444 --------------------------------------------T---CCC-
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         I 6 I 13
s Tonatia_saurophila.TonSau_scaffold_3334                  135281 11 -    259118 ----------------T----G---------C------C--TA-CC--TCC-
i Tonatia_saurophila.TonSau_scaffold_3334               I 1 I 18
s Trachypithecus_auratus.k141_738098                        26379 15 +     38948 GCAC------------A----C---------C------C--CC-T---CCCG
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   20109 15 -     32910 GCAC------------A----C---------C------C--CC-T---CCCG
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      1496 15 -     12939 GCAC------------A----C---------C------C--CC-T---CCCG
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       1431 15 -     14244 GCAC------------A----C---------C------C--CC-T---CCCG
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           42829 15 -     54611 GCAC------------A----C---------C------C--CC-T---CCCG
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                         635 15 -     11566 GCAC------------A----C---------C------C--CC-T---CCCG
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     2807 15 -     15592 GCAC------------A----C---------C------C--CC-T---CCCG
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          1464 15 +     14371 GCAC------------A----C---------C------C--CC-T---CCCG
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  51216 15 +     51589 GCAC------------A----C---------C------C--CC-T---CCCG
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       14397 15 +     14732 GCAC------------A----C---------C------C--CC-T---CCCG
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       4869 15 -     28054 GCAC------------A----C---------C------C--CC-T---CCCG
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44659669 15 -  44834318 GCAC------------A----C---------C------C--CC-T---CCCG
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       1972 15 +     13828 GCAC------------A----C---------C------C--CC-T---CCCG
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   4575 11 +     90398 ----------------C----TT--------G------C--TC-C---TCT-
i Tragulus_javanicus.TraJav_scaffold_14717              I 5 I 18
s Tupaia_chinensis.KB320831.1                             2792332 20 -   3938065 GTGT------------C----C---------CAGTTCAT--TG-T---CTC-
i Tupaia_chinensis.KB320831.1                           C 0 I 5
s Tupaia_tana.TupTan_flattened_line_68454                    4537 20 +     13056 ATGT------------C----C---------CAATTCAT--TG-T---CTC-
i Tupaia_tana.TupTan_flattened_line_68454               C 0 I 5
s Tursiops_truncatus.MRVK01000923.1                      69312833  7 -  96451834 --------------------------------------t--tc-c---tct-
i Tursiops_truncatus.MRVK01000923.1                     C 0 I 18
s Uropsilus_gracilis.UroGra_scaffold_69449                    713  9 +     10241 ---------------------C---------C------C--CC-T---TTT-
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 I 21
s Ursus_maritimus.KK498671.1                              6514194 11 +  28682327 ----------------c----a--------cc------c--tg-c---tct-
i Ursus_maritimus.KK498671.1                            I 12 I 18
s Varecia_rubra.k141_432109                                  4743  9 -     20643 ac-a------------T----C---------C------C-TC----------
i Varecia_rubra.k141_432109                             C 0 I 5
s Varecia_variegata.k141_775891                             24284  9 -     33872 ac-a------------T----C---------C------C-TC----------
i Varecia_variegata.k141_775891                         C 0 I 5
s Vicugna_pacos.KN269600.1                                1524078 11 -   2331223 ----------------A----TT--------C------C--TC-C---TCT-
i Vicugna_pacos.KN269600.1                              I 1 I 49
s Vulpes_lagopus.VulLag_flattened_line_2045                137703 11 -    281493 ----------------c----a-C-------T------C--TT-C---TCC-
i Vulpes_lagopus.VulLag_flattened_line_2045             I 1 I 18
s Xerus_inauris.XerIna_scaffold_7898                       126340  7 -    134049 --------------------------------------c--ct-t---ctc-
i Xerus_inauris.XerIna_scaffold_7898                    C 0 I 17
s Zalophus_californianus.ZalCal_flattened_line_3895         77957 11 -    232890 ----------------c----a-C-------T------C--TT-C---TCC-
i Zalophus_californianus.ZalCal_flattened_line_3895     I 30 n 62
s Zapus_hudsonius.ZapHud_scaffold_64392                     14420 14 -     20485 ACAC------------A----A---------C------C--CC-T---CCT-
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 I 17
s Ziphius_cavirostris.ZipCav_flattened_line_127025           6328  7 -      8775 --------------------------------------c--tc-c---tat-
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 I 18
e Sorex_araneus.JH798170.1                               17750754 3364 -  27805282 I
e Erinaceus_europaeus.JH835290.1                         11531598 1064 +  16010500 I
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           2226 17 -      6963 I
e Trichechus_manatus.JH594618.1                          16081947  5 +  31416278 I
e Tolypeutes_matacus.TolMat_scaffold_269431                  4974 17 +      6782 I
e Tamandua_tetradactyla.TamTet_scaffold_26877               14138 17 +     45698 I
e Procavia_capensis.ProCapCap_scaffold_15315                76765  5 +     78963 I
e Panthera_pardus.KV860323.1                              3637490 22 +  18214204 I
e Panthera_onca.PanOnc_flattened_line_1615                  33754 22 +    295523 I
e Orycteropus_afer.OryAfe_flattened_line_13509              43407  5 -     66828 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             4478 17 -      8794 I
e Microgale_talazaci.MicTal_scaffold_34660                  31060  5 -     48017 I
e Loxodonta_africana.GL010040.1                          20591497  5 -  62548349 I
e Heterohyrax_brucei.HetBruBak_scaffold_25354               56901  5 +     73687 I
e Elephantulus_edwardii.JH947210.1                        7804622 10712 +  15467074 I
e Echinops_telfairi.JH980316.1                           22994627  5 -  44670279 I
e Dasypus_novemcinctus.JH568778.1                          183099 17 -   6883506 I
e Choloepus_hoffmanni.KN194586.1                           761212 15 +    964067 I
e Choloepus_didactylus.ChoDid_scaffold_36182                15905 15 -     21363 I
e Hylobates_pileatus_a.tarseq_592                             33341 34 -     60944 I
e Propithecus_coquerelli.NW_012147997.1                    667273 6500 -   2312742 I
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               11298 7 +    209709 CCTC-AGC
s Allenopithecus_nigroviridis.k141_2469532                    785 7 -     60446 CCCC-AGC
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         1506 7 -     29318 CCCC-AGC
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                          443 7 +     38766 CCCC-AGC
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          1400 7 -     80423 CCCC-AGC
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             9696 7 -     18050 -CCCTAGC
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                 10789 7 -     11521 -CCCTAGC
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                             10373 7 -     21359 -CCCTAGC
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_298055                                 1670 7 +      1823 -CCCTAGC
i Alouatta_juara.k141_298055                            C 0 C 0
s Alouatta_macconnelli.k141_1331706                          9672 7 -     10438 -CCCTAGC
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            6328 7 +      7047 -CCCTAGC
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             9608 7 +     10410 -CCCTAGC
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            3416 7 -      4927 -CCCTAGC
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             6345 7 +      6429 -CCCTAGC
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Aotus_azarae.k141_3170768                                 62058 8 +     78111 CCCCTAGC
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            4999 8 +     22701 CCCCTAGC
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5748956 8 +   9889416 CCCCTAGC
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             5543 8 -    104377 CCCCTAGC
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               5545 8 +     23246 CCCCTAGC
i Aotus_vociferans.k141_718647                          C 0 C 0
s Arctocebus_calabarensis.k141_587554                         399 8 +      9265 CCCCTAGT
i Arctocebus_calabarensis.k141_587554                   I 1 I 13
s Ateles_geoffroyi_b.tarseq_2582                             9538804 8 +  39197703 CCCCTGGC
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             60075 8 +     85812 CCCCTGGC
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                11087 8 +     89302 CCCCTGGC
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             15592 8 -     58268 CCCCTGGC
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             63583 8 +    119057 CCCCTGGC
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               5552 8 -     25888 CCCCTGGC
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 6198 8 -     16375 CCCCTAGT
i Avahi_laniger.k141_2840928                            I 5 I 12
s Avahi_peyrierasi.k141_2689020                              2518 8 +      2719 CCCCTAGT
i Avahi_peyrierasi.k141_2689020                         I 5 I 12
s Cacajao_ayresi.k141_724503                               113442 8 -    171031 CCCCTAGC
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 12473 8 +    125063 CCCCTAGC
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                14518 8 -    216513 CCCCTAGC
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        7058 8 -    134917 CCCCTAGC
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Carlito_syrichta.NW_007248099.1                          308481 8 +    345090 cccctagc
i Carlito_syrichta.NW_007248099.1                       C 0 I 12
s Cebus_albifrons.Contig22                               18890287 8 -  29618158 CCCGTAGC
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 7831 8 -     26817 CCCGTAGC
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                12071 8 +     25043 CCCATAGC
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         7515 8 +     21754 CTCCTAGC
i Cephalopachus_bancanus.k141_702587                    C 0 I 12
s Cercocebus_atys.KQ010443.1                              6554728 7 +   6739814 CCCC-AGC
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      26205 7 +     60454 CCCC-AGC
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          1410 7 -     21101 CCCC-AGC
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         58720 7 -    107033 CCCC-AGC
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        1612 7 -     17608 CCCC-AGC
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          29107 7 +     30494 CCCC-AGC
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          57953 7 -     59240 CCCC-AGC
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          1654 7 +     16677 CCCC-AGC
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           23812 7 +     35983 CCCC-AGC
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11990340 7 +  12117833 CCCC-AGC
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46477098 7 +  46592721 CCCC-AGC
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      40649 7 -     45581 CCCC-AGC
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       1655 7 +     35577 CCCC-AGC
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        1431 7 -     25661 CCCC-AGC
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        1409 7 -     17744 CCCC-AGC
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        21025 7 +     37128 CCCC-AGC
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           58485 8 -     68416 CCCCTAGT
i Cheirogaleus_major.k141_1157592                       I 5 I 15
s Cheirogaleus_medius.k141_133808                            7528 8 +     13308 CCCCTAGT
i Cheirogaleus_medius.k141_133808                       I 5 I 15
s Cheracebus_lucifer.k141_619653                             5088 8 -     18223 CCCCTAGC
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             22111 8 +     25473 CCCCTAGC
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           41146 8 +     57117 CCCCTAGC
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          45825 8 +     54541 CCCCTAGC
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chiropotes_israelita.k141_1189915                         70649 8 +    196370 CCCCTAGC
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          14829 8 +     40510 CCCCTAGC
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15138571 7 -  15256731 CCCC-AGC
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      33618 7 -     53260 CCCC-AGC
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101144182 7 + 101219884 CCCC-AGC
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10885948 7 +  10971483 CTCC-AGC
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147664112 7 + 156195979 CTCC-AGC
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            16097 7 +     23629 CTCC-AGC
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16844341 8 +  31942871 CCCCTAGT
i Daubentonia_madagascariensis.ctg11                    I 5 I 12
s Erythrocebus_patas.Contig8                             48770749 7 -  48907691 CCCC-AGC
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eulemur_albifrons.k141_715837                              4532 8 +     13586 CCCCTAGT
i Eulemur_albifrons.k141_715837                         I 5 I 12
s Eulemur_collaris.k141_311830                               4469 8 -      6809 CCCCTAGT
i Eulemur_collaris.k141_311830                          I 5 I 12
s Eulemur_coronatus.k141_3240342                            10942 8 +     36558 CCCCTAGT
i Eulemur_coronatus.k141_3240342                        I 5 I 12
s Eulemur_flavifrons.k141_903901                             7261 8 +     60246 CCCCTAGT
i Eulemur_flavifrons.k141_903901                        I 5 I 12
s Eulemur_fulvus.k141_653297                                10740 8 +    109717 CCCCTAGT
i Eulemur_fulvus.k141_653297                            I 5 I 12
s Eulemur_macaco.k141_1341545                               15123 8 +     16540 CCCCTAGT
i Eulemur_macaco.k141_1341545                           I 5 I 12
s Eulemur_mongoz.k141_825972                                15396 8 +     27497 CCCCTAGT
i Eulemur_mongoz.k141_825972                            I 5 I 12
s Eulemur_rubriventer.k141_411740                           17853 8 +     26808 CCCCTAGT
i Eulemur_rubriventer.k141_411740                       I 5 I 12
s Eulemur_rufus.k141_1620292                                32588 8 +     46535 CCCCTAGT
i Eulemur_rufus.k141_1620292                            I 5 I 12
s Eulemur_sanfordi.k141_186399                              15310 8 -     29447 CCCCTAGT
i Eulemur_sanfordi.k141_186399                          I 5 I 12
s Galago_moholi.ctg555                                     210274 8 -    847004 CCCCTAGT
i Galago_moholi.ctg555                                  I 1 I 13
s Galago_senegalensis.k141_964197                           12653 8 -     43889 CCCCTAGT
i Galago_senegalensis.k141_964197                       I 1 I 13
s Galagoides_demidoff.k141_1769638                           9730 8 +     27357 CCCCTAGT
i Galagoides_demidoff.k141_1769638                      I 1 I 13
s Gorilla_beringei.k141_111300                               4814 7 -     14630 CCCC-AGC
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119651913 7 - 195582420 CCCC-AGC
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         1316 7 +     10286 -CCCTAGT
i Hapalemur_alaotrensis.k141_1280836                    C 0 I 12
s Hapalemur_gilberti.k141_1254239                            9492 7 +      9690 -CCCTAGT
i Hapalemur_gilberti.k141_1254239                       C 0 I 12
s Hapalemur_griseus.k141_1387522                             5122 7 +     56096 -CCCTAGT
i Hapalemur_griseus.k141_1387522                        C 0 I 12
s Hapalemur_meridionalis.k141_186231                        28372 7 -     42470 -CCCTAGT
i Hapalemur_meridionalis.k141_186231                    C 0 I 12
s Hapalemur_occidentalis.k141_797938                        44995 7 -     54384 -CCCTAGT
i Hapalemur_occidentalis.k141_797938                    C 0 I 12
s Hoolock_leuconedys.ctg649                                   103243 7 +    115816 CCCC-AGC
i Hoolock_leuconedys.ctg649                                I 15 I 354
s Hylobates_abbotti.k141_493872                              4646 7 +      5897 CCCC-AGC
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_624065                               1510 7 +      2112 CCCC-AGC
i Hylobates_agilis.k141_624065                          C 0 C 0
s Hylobates_klossii.k141_466549                             11086 7 +     11537 CCCC-AGC
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14624191 7 -  25970782 CCCC-AGC
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            1447 7 -      2977 CCCC-AGC
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Indri_indri.k141_4418183                                    962 8 -      1457 CCCCTAGT
i Indri_indri.k141_4418183                              I 5 I 12
s Lagothrix_lagothricha.k141_12968                          49672 8 -    147782 CCCCTGGC
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lemur_catta.scaffold_1                                258406676 7 - 285822530 -CCCTAGT
i Lemur_catta.scaffold_1                                I 1 I 12
s Lepilemur_ankaranensis.k141_884009                        23440 8 +     39228 CCCCTGAT
i Lepilemur_ankaranensis.k141_884009                    I 1 I 1
s Lepilemur_dorsalis.k141_134267                            52815 8 +     63517 CCCCTGAT
i Lepilemur_dorsalis.k141_134267                        I 1 I 12
s Lepilemur_ruficaudatus.k141_617879                        78072 8 +    116806 CCCCTGAT
i Lepilemur_ruficaudatus.k141_617879                    I 5 I 12
s Lepilemur_septentrionalis.k141_578524                     31079 8 -     33031 CCCCTGAT
i Lepilemur_septentrionalis.k141_578524                 I 1 I 1
s Lophocebus_aterrimus.ctg55                             19247817 7 +  19376315 CCCC-AGC
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           10047 8 +     84689 CCCCTAGT
i Loris_lydekkerianus.k141_550999                       I 1 I 13
s Loris_tardigradus.ctg97                                 3777796 8 +   6799190 CCCCTAGT
i Loris_tardigradus.ctg97                               I 1 I 13
s Macaca_arctoides.k141_2201161                             19557 7 +     74745 CCCC-AGC
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12706013 7 +  12821369 CCCC-AGC
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                1658 7 -      3136 CCCC-AGC
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           46475 7 +     63263 CCCC-AGC
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                 1178 7 -      2568 CCCC-AGC
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 1764 7 -      7381 CCCC-AGC
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  44982 7 -     79256 CCCC-AGC
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196035090 7 + 196197964 CCCC-AGC
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11445258 7 +  11645122 CCCC-AGC
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   3929 7 -     46448 CCCC-AGC
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                1601 7 -     13212 CCCC-AGC
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 15282 7 -     55006 CCCC-AGC
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43840399 7 +  43892939 CCCC-AGC
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               16568 7 -     24607 CCCC-AGC
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               3934 7 -     27140 CCCC-AGC
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43436976 7 -  43563597 CCCC-AGC
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4449802 7 -   4543643 CCCC-AGC
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Microcebus_murinus.CM007691.1                          16509695 8 +  47401472 CCCCTAGT
i Microcebus_murinus.CM007691.1                         I 5 I 12
s Miopithecus_ogouensis.k141_2935907                         1529 7 +     29742 CCCC-AGC
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirza_zaza.k141_226143                                     5085 8 +      8497 CCCCTAGT
i Mirza_zaza.k141_226143                                I 5 I 15
s Nasalis_larvatus.k141_153429                               8030 7 +     48152 CCCC-AGC
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Nomascus_annamensis.k141_302224                            1488 7 +      1516 CCCC-AGC
i Nomascus_annamensis.k141_302224                       C 0 n 0
s Nomascus_concolor.k141_226614                               748 7 -      5092 CCCC-AGC
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_642452                            1531 7 +      2851 CCCC-AGC
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             24466 7 -  18771707 CCCC-AGC
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  2169 7 +      4512 CCCC-AGC
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nycticebus_bengalensis.LG16                            65566481 8 -  95554990 CCCCTAGT
i Nycticebus_bengalensis.LG16                           I 1 I 13
s Nycticebus_coucang.k141_2051882                            3210 8 +      6470 CCCCTAGT
i Nycticebus_coucang.k141_2051882                       I 1 I 13
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65668819 8 +  89412551 CCCCTAGT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     I 1 I 13
s Otolemur_crassicaudatus.k141_321880                       38379 8 +     38679 CCCCTAGT
i Otolemur_crassicaudatus.k141_321880                   I 1 I 13
s Otolemur_garnettii.GL873528.1                          18007806 8 -  38779656 CCCCTAGT
i Otolemur_garnettii.GL873528.1                         I 1 I 13
s Pan_paniscus.CM003386.1                               127574174 7 - 205426864 CCCC-AGC
i Pan_paniscus.CM003386.1                               C 0 I 62
s Pan_troglodytes.CM009241.2                            120151327 7 - 196562556 CCCC-AGC
i Pan_troglodytes.CM009241.2                            C 0 I 62
s Papio_anubis.CM001492.2                               188155767 7 - 188283584 CCCC-AGC
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             4084 7 +      5367 CCCC-AGC
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47513154 7 +  47705337 CCCC-AGC
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 67132 7 -    104429 CCCC-AGC
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    5664 7 +     14967 CCCC-AGC
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 1525 7 -      7628 CCCC-AGC
i Papio_ursinus.k141_1345919                            C 0 C 0
s Perodicticus_ibeanus.k141_117958                           4794 8 -     23713 TCCCTAGT
i Perodicticus_ibeanus.k141_117958                      I 1 I 13
s Perodicticus_potto.k141_713187                            24103 8 -     27972 TCCCTAGT
i Perodicticus_potto.k141_713187                        I 1 I 13
s Piliocolobus_badius.k141_1987485                           1549 7 -      5908 CCCC-ATC
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       2173 7 -     17985 CCCC-ATC
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            1540 7 +      7694 CCCC-ATC
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26740018 7 +  26888534 CCCC-ATC
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pithecia_albicans.k141_991845                             43150 8 -     61926 CCCCTAGC
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        24581 8 +     78826 CCCCTAGC
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              8530 8 -     15800 CCCCTAGC
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        11728 8 -     16101 CCCCTAGC
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          5037 8 +      9673 CCCCTAGC
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13474033 8 -  19735023 CCCCTAGC
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           12939 8 -     31692 CCCCTAGC
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       22372 8 +     44506 CCCCTAGC
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        22584 8 +     67491 CCCCTAGC
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      12823 8 -     98129 CCCCTAGC
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     22423 8 +    147771 CCCCTAGC
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        22678 8 -     23762 CCCCTAGC
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          3144 8 -     55515 CCCCTAGC
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         22497 8 +    152463 CCCCTAGC
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                        214 8 -    119457 CCCCTAGC
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         12219 8 +    134592 CCCCTAGC
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          22807 8 -     75465 CCCCTAGC
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              186699 7 -    373494 CCCC-AGC
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19807347 7 +  19899266 CCCC-AGC
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               5275 7 -     15069 CCCC-AGC
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              5409 7 +     14865 CCCC-AGC
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6848057 7 +  12164890 -cccTAGT
i Prolemur_simus.MPIZ01000048.1                         C 0 I 12
s Propithecus_coronatus.k141_1353159                         3119 8 +     11805 CCCCTAGT
i Propithecus_coronatus.k141_1353159                    I 5 I 12
s Propithecus_diadema.k141_577245                           42455 8 +     52369 CCCCTAGT
i Propithecus_diadema.k141_577245                       I 5 I 12
s Propithecus_edwardsi.k141_1317105                         34843 8 -     44753 CCCCTAGT
i Propithecus_edwardsi.k141_1317105                     I 5 I 12
s Propithecus_perrieri.k141_7554                            16765 8 +     27322 CCCCTAGT
i Propithecus_perrieri.k141_7554                        I 5 I 12
s Propithecus_tattersalli.k141_907138                       16400 8 -     53241 CCCCTAGT
i Propithecus_tattersalli.k141_907138                   I 5 I 12
s Propithecus_verreauxi.k141_158021                         38673 7 -     48185 -CCCTAGT
i Propithecus_verreauxi.k141_158021                     C 0 I 12
s Pygathrix_cinerea.k141_374971                             29393 7 +     56732 CCCC-AGC
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6805884 7 +   6970761 CCCC-AGC
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             5278 7 +     18040 CCCC-AGC
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rhinopithecus_bieti.k119_1391695                           1506 7 -      1866 CCCC-AGC
i Rhinopithecus_bieti.k119_1391695                      C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206377163 7 - 206558726 CCCC-AGC
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44856063 7 -  45163003 CCCC-AGC
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15672238 8 -  43202129 CTCCTAGC
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        4155 8 +     34089 CTCCTAGC
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              4096 8 -     60842 CTCCTAGC
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              4191 8 +     67014 CTCCTAGC
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              4169 8 +     60816 CTCCTAGC
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 4106 8 -     76454 CTCCTAGC
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17340831 8 -  30362882 CCCGTAGC
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         20190 8 -     62485 CCCGTAGC
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Semnopithecus_entellus.k141_1572367                        2890 7 +     15331 CCCC-AGC
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       8287 7 +     20762 CCCC-AGC
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         118289 7 +    130994 CCCC-AGC
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           37076 7 +     46263 CCCC-AGC
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     30190 7 +     42640 CCCC-AGC
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        13234 7 +     30600 CCCC-AGC
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        14448 7 -  13920577 CCCC-AGC
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tarsius_lariang.k141_609102                               25963 8 +     42269 CCCCTATC
i Tarsius_lariang.k141_609102                           C 0 I 12
s Tarsius_wallacei.k141_48636                               59279 8 +     65473 CCCCTATC
i Tarsius_wallacei.k141_48636                           C 0 I 12
s Theropithecus_gelada.CM009951.1                       194007294 7 - 194193292 CCCC-AGC
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Trachypithecus_auratus.k141_738098                        26394 7 +     38948 CCCC-AGC
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   20124 7 -     32910 CCCC-AGC
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      1511 7 -     12939 CCCC-AGC
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       1446 7 -     14244 CCCC-AGC
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           42844 7 -     54611 CCCC-AGC
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                         650 7 -     11566 CCCC-AGC
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     2822 7 -     15592 CCCC-AGC
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          1479 7 +     14371 CCCC-AGC
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  51231 7 +     51589 CCCC-AGC
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       14412 7 +     14732 CCCC-AGC
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       4884 7 -     28054 CCCC-AGC
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44659684 7 -  44834318 CCCC-AGC
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       1987 7 +     13828 CCCC-AGC
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Varecia_rubra.k141_432109                                  4757 8 -     20643 CCCCTAGT
i Varecia_rubra.k141_432109                             I 5 I 12
s Varecia_variegata.k141_775891                             24298 8 -     33872 CCCCTAGT
i Varecia_variegata.k141_775891                         I 5 I 12
e Eptesicus_fuscus.JH977687.1                             4703615 25 +   6522550 I
e Macroglossus_sobrinus.MacSob_scaffold_879                701013 18 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             38775 13 -     47444 I
e Petromus_typicus.PetTyp_scaffold_33007                    11952 16 -     36578 I
e Sorex_araneus.JH798170.1                               17750754 3364 -  27805282 I
e Dinomys_branickii.DinBra_scaffold_1996                   156451 21 +    228994 I
e Erinaceus_europaeus.JH835290.1                         11531598 1064 +  16010500 I
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           2226 17 -      6963 I
e Aplodontia_rufa.AprRuf_scaffold_156013                     3161 17 +      5067 I
e Oryctolagus_cuniculus.CM000803.1                      141875763 13 + 163896628 I
e Ochotona_princeps.JH802095.1                            4995510 12 -  23139505 I
e Lepus_americanus.LepAme_scaffold_62849                    12721 13 +     22452 I
e Perognathus_longimembris.PerPac_flattened_line_22291      43069 17 -     45160 I
e Dipodomys_stephensi.DipSte_scaffold_44365                 27195 21 +     28912 I
e Dipodomys_ordii.KN672545.1                              3655562 21 +   4240102 I
e Suricata_suricatta.SurSur_flattened_line_20339            27010 18 +     62062 I
e Ziphius_cavirostris.ZipCav_flattened_line_127025           6335 18 -      8775 I
e Zalophus_californianus.ZalCal_flattened_line_3895         77968 62 -    232890 I
e Vulpes_lagopus.VulLag_flattened_line_2045                137714 18 -    281493 I
e Vicugna_pacos.KN269600.1                                1524089 49 -   2331223 I
e Ursus_maritimus.KK498671.1                              6514205 18 +  28682327 I
e Uropsilus_gracilis.UroGra_scaffold_69449                    722 21 +     10241 I
e Tursiops_truncatus.MRVK01000923.1                      69312840 18 -  96451834 I
e Trichechus_manatus.JH594618.1                          16081947 5 +  31416278 I
e Tragulus_javanicus.TraJav_scaffold_14717                   4586 18 +     90398 I
e Tonatia_saurophila.TonSau_scaffold_3334                  135292 18 -    259118 I
e Tolypeutes_matacus.TolMat_scaffold_269431                  4974 17 +      6782 I
e Tapirus_terrestris.TapTer_scaffold_14939                  56994 18 +     99546 I
e Tapirus_indicus.TapInd_scaffold_176                      806303 18 +   1148477 I
e Tamandua_tetradactyla.TamTet_scaffold_26877               14138 17 +     45698 I
e Tadarida_brasiliensis.TadBra_scaffold_145589               5459 80 -      6213 I
e Sus_scrofa.CM000824.4                                 189271281 18 + 218635234 I
e Spilogale_gracilis.SpiGra_flattened_line_905             234184 19 -    276980 I
e Solenodon_paradoxus.SolPar_flattened_line_1012            18296 17 +    739146 I
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   31708 22 -    114521 I
e Saiga_tatarica.SaiTat_scaffold_82192                       7356 18 +     12214 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                18719 18 +    109198 I
e Rhinolophus_sinicus.LVEH01000179.1                      1787232 49 +   2252614 I
e Rangifer_tarandus.RanTarSib_scaffold_24239                15193 18 +     68503 I
e Puma_concolor.QAVW01000427.1                          131533748 22 - 161321710 I
e Pteropus_vampyrus.KN525959.1                             603351 18 -   3946241 I
e Pteropus_alecto.KB031157.1                             13245395 18 -  17261082 I
e Pteronura_brasiliensis.PteBra_flattened_line_1343        246063 19 -    344369 I
e Pteronotus_parnellii.KE867983.1                            3290 18 -     27784 I
e Procavia_capensis.ProCapCap_scaffold_15315                76765 5 +     78963 I
e Platanista_gangetica.PlaMin_flattened_line_72990           4810 18 +     21690 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            96909 25 +    112873 I
e Phocoena_phocoena.PhoPho_flattened_line_11948            120730 18 -    122454 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    115202 18 -    135482 I
e Pantholops_hodgsonii.KE114631.1                         1065536 18 -   1292953 I
e Panthera_tigris.KE721879.1                              5027163 22 -   6340057 I
e Panthera_pardus.KV860323.1                              3637490 22 +  18214204 I
e Panthera_onca.PanOnc_flattened_line_1615                  33754 22 +    295523 I
e Ovis_canadensis.OviCan_scaffold_6251                      77890 18 +    140051 I
e Ovis_aries.CM001582.2                                 134076676 18 - 275406953 I
e Otocyon_megalotis.JAEUCK010005121.1                      307617 18 -    505867 I
e Orycteropus_afer.OryAfe_flattened_line_13509              43407 5 -     66828 I
e Orcinus_orca.KB316965.1                                 7224123 18 -   7562323 I
e Okapia_johnstoni.LVCL01S0017931.1                         36410 18 +     78940 I
e Odocoileus_virginianus.KZ101650.1                       1079116 18 +   1425656 I
e Odobenus_rosmarus.KB229587.1                            1048413 73 +   1475581 I
e Nyctereutes_procyonoides.CAJHUB010000786.1                30336 18 +   3668941 I
e Noctilio_leporinus.NocLep_scaffold_12062                  48734 18 +     94413 I
e Neophocaena_asiaeorientalis.KZ688543.1                  3950441 18 -   4490290 I
e Neomonachus_schauinslandi.NINY01007774.1                4484294 49 -  14209539 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             4478 17 -      8794 I
e Myotis_myotis.MyoMyo_scaffold_6123                        10078 25 +     66751 I
e Myotis_lucifugus.GL429887.1                             3464863 25 -   3747815 I
e Myotis_davidii.KB114863.1                               5018959 25 +   6462685 I
e Myotis_brandtii.KE161952.1                               967283 25 +   8389877 I
e Mustela_putorius.JH417978.1                             4423754 19 -  28371801 I
e Murina_feae.MurFea_scaffold_2254                          18990 21 -    100666 I
e Mungos_mungo.MunMun_flattened_line_8729                  144328 18 -    168139 I
e Moschus_moschiferus.MosMos_scaffold_78805                   428 18 -     19904 I
e Mormoops_blainvillei.MorMeg_scaffold_2952                160633 18 +    265003 I
e Monodon_monoceros.MonMon_M_scaffold_5598                 145826 18 +    154973 I
e Mirounga_angustirostris.MirAng_flattened_line_8852        10902 49 -    104932 I
e Miniopterus_schreibersii.MinSch_scaffold_24116            33770 18 +     45743 I
e Miniopterus_natalensis.LDJU01000022.1                   8209118 18 +  10048721 I
e Micronycteris_hirsuta.MicHir_scaffold_37978               22121 18 -     32043 I
e Microgale_talazaci.MicTal_scaffold_34660                  31060 5 -     48017 I
e Mellivora_capensis.MelCap_flattened_line_15433              389 19 -     87323 I
e Megaderma_lyra.MegLyr_scaffold_3562                       63830 18 -    234502 I
e Manis_pentadactyla.KN017078.1                             35151 18 +     58827 I
e Manis_javanica.JSZB01003966.1                            145076 17 +    252755 I
e Lycaon_pictus.CM007556.1                               11087531 18 +  39895028 I
e Loxodonta_africana.GL010040.1                          20591497 5 -  62548349 I
e Lipotes_vexillifer.KE558548.1                            135391 18 +   3060487 I
e Leptonychotes_weddellii.KB714749.1                      3085389 49 -   3498232 I
e Lasiurus_borealis.LasBor_scaffold_5102                   113706 24 -    115756 I
e Kogia_breviceps.KogBre_flattened_line_35920               23054 18 +     37189 I
e Inia_geoffrensis.IniGeo_flattened_line_66725               8438 18 +     17520 I
e Hyaena_hyaena.HyaHya_flattened_line_20729                 16715 18 -     67322 I
e Hipposideros_galeritus.HipGal_scaffold_104691              6975 21 -      9143 I
e Hipposideros_armiger.JXIK01001085.1                      277823 21 -    477199 I
e Hippopotamus_amphibius.HipAmp_scaffold_1308              146534 24 +    277961 I
e Heterohyrax_brucei.HetBruBak_scaffold_25354               56901 5 +     73687 I
e Hemitragus_hylocrius.HemHyl_scaffold_16669                26882 18 -     91191 I
e Helogale_parvula.HelPar_flattened_line_22962              16632 18 +     53719 I
e Giraffa_tippelskirchi.LVKQ01S012154.1                    180682 18 -    189561 I
e Felis_nigripes.FelNig_flattened_line_8080                 20600 22 +     52776 I
e Felis_catus_fca126.CM031420.1                         129279455 22 - 158578461 I
e Eubalaena_japonica.EubJap_flattened_line_7756             60898 18 +     89355 I
e Eschrichtius_robustus.EscRob_flattened_line_685          314444 18 +    330699 I
e Equus_przewalskii.ATBW01073585.1                          12337 18 +     92910 I
e Equus_caballus.CM000402.2                              13350847 18 +  41866177 I
e Equus_asinus.JREZ01000062.1                             5852344 18 -   7175178 I
e Enhydra_lutris.KZ291749.1                              85871575 19 +  99434291 I
e Elephantulus_edwardii.JH947210.1                        7804622 10712 +  15467074 I
e Elaphurus_davidianus.JRFZ01086400.1                     1490885 18 +   1727528 I
e Eidolon_helvum.KE772537.1                                 11640 18 +     24177 I
e Echinops_telfairi.JH980316.1                           22994627 5 -  44670279 I
e Diceros_bicornis.DicBicMic_scaffold_9545                   2594 18 +    151128 I
e Dicerorhinus_sumatrensis.PEKH010003161.1                 321944 18 +    993696 I
e Desmodus_rotundus.KZ672188.1                           18698217 18 -  18957592 I
e Delphinapterus_leucas.KZ290064.1                       80036238 18 -  96802777 I
e Dasypus_novemcinctus.JH568778.1                          183099 17 -   6883506 I
e Cryptoprocta_ferox.CryFer_flattened_line_19014            51426 18 -     70449 I
e Craseonycteris_thonglongyai.CraTho_scaffold_22679         39110 18 -     40477 I
e Condylura_cristata.JH655880.1                          60612909 23 +  78930452 I
e Choloepus_hoffmanni.KN194586.1                           761212 15 +    964067 I
e Choloepus_didactylus.ChoDid_scaffold_36182                15905 15 -     21363 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_160623         3047 18 -      9338 I
e Catagonus_wagneri.CatWag_scaffold_1305                   158290 9 -    276539 I
e Carollia_perspicillata.CarPer_scaffold_4436               58937 18 +     67245 I
e Capra_hircus.CM004562.1                               135705837 18 - 157403528 I
e Capra_aegagrus.CM003214.1                              21324610 18 + 157394656 I
e Canis_lupus_orion.HG994411.1                           16455090 18 -  44759192 I
e Canis_lupus_familiaris.chr31                           11088075 18 +  39895921 I
e Canis_lupus_dingo.QKWQ01001993.1                       11265541 18 -  35597290 I
e Canis_lupus_VD.CanFam_VD_scaffold_16982                   13899 18 +     87036 I
e CanFam4.chr31                                          11518874 18 +  39901454 I
e Camelus_ferus.KB016973.1                                2972419 47 +   6889770 I
e Camelus_dromedarius.KN271192.1                           396686 47 -  15254737 I
e Camelus_bactrianus.KN276303.1                           3218982 47 -   8989139 I
e Bubalus_bubalis.KI419065.1                              1232191 18 -   1914593 I
e Bos_taurus.CM000177.6                                 136295108 18 - 158972876 I
e Bos_mutus.JH883513.1                                     571912 18 -    998990 I
e Bos_indicus.CM003021.1                                138139375 18 - 161108492 I
e Bison_bison.KN264915.1                                  6559271 18 +   6870073 I
e Beatragus_hunteri.BeaHun_scaffold_21644                   42597 18 -     72089 I
e Balaenoptera_bonaerensis.DF502048.1                        4791 18 -     13118 I
e Balaenoptera_acutorostrata.KI537095.1                  26379560 18 +  51448160 I
e Artibeus_jamaicensis.ArtJam_scaffold_41619                 8148 18 -     29036 I
e Antilocapra_americana.AntAmePen_scaffold_42841            30116 18 +     33004 I
e Anoura_caudifer.AnoCau_scaffold_422                      389739 18 -    631301 I
e Ammotragus_lervia.NIVO01013474.1                        3519534 18 +   4113121 I
e Ailurus_fulgens.LNAC01000003.1                          7094059 19 -  16596857 I
e Ailuropoda_melanoleuca.LNAT01000321.1                  10656715 18 +  23371972 I
e Acinonyx_jubatus.LLWD01000356.1                         2033410 22 +   3721120 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           18433 18 -    119109 I
e Glis_glis.GliGli_scaffold_79770                           12528 17 -     18683 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     14434 17 -     20485 I
e Jaculus_jaculus.JH725517.1                              8565353 17 +  11848649 I
e Hylobates_pileatus_a.tarseq_592                             33341 34 -     60944 I
e Allactaga_bullata.AllBul_scaffold_70162                   16342 17 -     22067 I
e Galeopterus_variegatus.GalVar_scaffold_354               155739 0 +    324696 C
e Microtus_ochrogaster.CM001673.1                        22819523 48 -  98408828 I
e Xerus_inauris.XerIna_scaffold_7898                       126347 17 -    134049 I
e Tupaia_tana.TupTan_flattened_line_68454                    4557 5 +     13056 I
e Tupaia_chinensis.KB320831.1                             2792352 5 -   3938065 I
e Spermophilus_dauricus.KZ294190.1                        2239234 17 +   2842873 I
e Sigmodon_hispidus.SigHis_scaffold_11332                   99772 17 -    120886 I
e Rattus_norvegicus.chr11                                13915034 17 +  90463843 I
e Psammomys_obesus.NESX01026517.1                           33733 17 +     77221 I
e Propithecus_coquerelli.NW_012147997.1                    667273 6500 -   2312742 I
e Peromyscus_maniculatus.KI615518.1                       4949814 17 -   8017169 I
e Onychomys_torridus.OnyTor_scaffold_12578                  36578 17 +     62360 I
e Ondatra_zibethicus.OndZib_scaffold_6821                  124777 47 +    145789 I
e Octodon_degus.JH651621.1                                3685021 14 +  10294119 I
e Nannospalax_galili.KL201303.1                            117892 17 +    362372 I
e Myocastor_coypus.MyoCoy_scaffold_3653                     89479 14 -    117718 I
e Muscardinus_avellanarius.MusAve_scaffold_9643             11097 17 +     98495 I
e Mus_spretus.CM004110.1                                 74330271 17 +  97876770 I
e Mus_pahari.LT608305.1                                  67555316 17 +  89017189 I
e Mus_musculus.chr16                                     75489093 17 +  98207768 I
e Mus_caroli.LT608236.1                                  70766031 17 +  92629107 I
e Mesocricetus_auratus.KB708139.1                         1046372 48 -  26018355 I
e Meriones_unguiculatus.MerUng_scaffold_52233               12181 17 +     15977 I
e Marmota_marmota.CZRN01000005.1                         36873154 17 +  64221397 I
e Ictidomys_tridecemlineatus.JH393315.1                   7125316 17 +  13083262 I
e Hystrix_cristata.HysCri_scaffold_50788                     5601 17 +     22540 I
e Heterocephalus_glaber.JH602058.1                        2550527 21 +  31725842 I
e Graphiurus_murinus.GraMur_scaffold_4493                   77073 17 +    118900 I
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I
e Ellobius_talpinus.LOJH01090055.1                           6340 47 -      7838 I
e Ellobius_lutescens.LOEQ01003611.1                        239225 48 -    369425 I
e Dolichotis_patagonum.DolPat_scaffold_14102                35550 22 -     73477 I
e Dasyprocta_punctata.DasPun_flattened_line_634             58296 21 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                17210 21 +     26546 I
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 30197 14 -     67205 I
e Ctenodactylus_gundi.CteGun_scaffold_447                  207608 17 -    956709 I
e Cricetulus_griseus.LT883672.1                          53028666 42 +  72327488 I
e Cricetomys_gambianus.CriGam_scaffold_949                 277996 17 -    399297 I
e Chinchilla_lanigera.JH721867.1                         15961194 21 +  43084221 I
e Cavia_tschudii.CavTsc_scaffold_488                       176168 17 +    436027 I
e Cavia_porcellus.DS562889.1                             15797977 17 -  24440124 I
e Cavia_aperea.AVPZ01000278.1                            15786043 17 -  24422027 I
e Castor_canadensis.CasCan_scaffold_47037                   30164 21 +     33760 I
e Acomys_cahirinus.AcoCah_scaffold_1625                    112066 0 -    189883 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               11305 62 +    209709 A----CACC----A--C------TG-GT----TAATC---TTTA-TT--T----TCAGGA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-ATAT--TAAT----A-AAG-G-T--AA-A
s Acinonyx_jubatus.LLWD01000356.1                         2033432 28 +   3721120 ---------------------------T----TACTC---TTTG-TT--T----TCACAA--GAC----A-AA------A--A-A------------------------------------------------------------------------
i Acinonyx_jubatus.LLWD01000356.1                       I 22 I 23
s Acomys_cahirinus.AcoCah_scaffold_1625                    112066 51 -    189883 ---------------------------T----TAATC---CTTA-TT-TT-----CATC----AGA---A-A-------A--A-A----A---A--T-TTC------------------------TA-AAAT--GAAT----A-AGG-G-A--AA-A
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10656733 64 +  23371972 A----CAAC----A--C------CAGGT----TACTC---TTCG-TT--T----TCAGAG--GAG----A-CA------A--A-A----G---A--G-GTC------------------------TG-TTAT--GAAT----A-AA-GA-T--AA-A
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 18 C 0
s Ailurus_fulgens.LNAC01000003.1                          7094078 64 -  16596857 A----CAAC----A--C------CAGGT----TGCTC---TTCA-TT--T----TCAGAA--GAT----A-AA------A--A-A----G---A--G-TTC------------------------TG-TTAT--GAAT----A-AA-GG-T--AA-a
i Ailurus_fulgens.LNAC01000003.1                        I 19 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   16359 64 -     22067 A----TTTC----A--A------TG-AT----TTATC---TTTA-TT--T----TCAAAA--GAG----A-A-------A-AA-G---AA---A--T-GTC------------------------TG-ATAT--TGAT----G-AAG-A-A--AA-A
i Allactaga_bullata.AllBul_scaffold_70162               I 17 C 0
s Allenopithecus_nigroviridis.k141_2469532                    792 61 -     60446 A----TA-C----A--C------TG-GC----TAATC---GTTA-TT--T----TCAGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-GTAT--GAAT----A-AAG-G-T--AA-A
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         1513 61 -     29318 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-GTAT--GAAT----A-AAG-G-T--AA-A
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                          450 61 +     38766 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-GTAT--GAAT----A-AAG-G-T--AA-A
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          1407 61 -     80423 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-GTAT--GAAT----A-AAG-G-T--AA-A
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             9703 62 -     18050 A----CACC----A--C------TG-GT----TAATC---TTTA-TT--T----TCATGA--GAG----A-A-------C--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-A
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                 10796 62 -     11521 A----CACC----A--C------TG-GT----TAATC---TTTA-TT--T----TCATGA--GAG----A-A-------C--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-A
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                             10380 62 -     21359 A----CACC----A--C------TG-GT----TAATC---TTTA-TT--T----TCATGA--GAG----A-A-------C--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-A
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_298055                                 1677 62 +      1823 A----CACT----A--C------TG-GT----TAATC---TTTA-TT--T----TCATGA--GAG----A-A-------C--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-A
i Alouatta_juara.k141_298055                            C 0 N 0
s Alouatta_macconnelli.k141_1331706                          9679 62 -     10438 A----CACC----A--C------TG-GT----TAATC---TTTA-TT--T----TCATGA--GAG----A-A-------C--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-A
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            6335 62 +      7047 A----CACC----A--C------TG-GT----TAATC---TTTA-TT--T----TCATGA--GAG----A-A-------C--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-A
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             9615 62 +     10410 A----CACC----A--C------TG-GT----TAATC---TTTA-TT--T----TCATGA--GAG----A-A-------C--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-A
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            3423 62 -      4927 A----CACT----A--C------TG-GT----TAATC---TTTA-TT--T----TCATGA--GAG----A-A-------C--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-A
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             6352 62 +      6429 A----CACT----A--C------TG-GT----TAATC---TTTA-TT--T----TCATGA--GAG----A-A-------C--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-A
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3519552 34 +   4113121 a----cacc----a--c------tg-AT----TGCTC---TTTA-TT--T----CCAGAA--GAG----A-A-------------------------------------------------------------------------------------
i Ammotragus_lervia.NIVO01013474.1                      I 18 I 27
s Anoura_caudifer.AnoCau_scaffold_422                      389757 64 -    631301 G----CAGT----A--C------GG-GT----TAGTC---TTTA-TT--T----TCAGAA--G-A----A-AAAA----A--A-A----G---A--T-GTC------------------------TA-ATAT--GAAT----A-GA--G-C-TAA-A
i Anoura_caudifer.AnoCau_scaffold_422                   I 18 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            30134 34 +     33004 A----CATA----A--C------TG-AT----TGCTC---TTTA-TT--T----CCAGAA--GAG----A-A-------------------------------------------------------------------------------------
i Antilocapra_americana.AntAmePen_scaffold_42841        I 18 I 28
s Aotus_azarae.k141_3170768                                 62066 62 +     78111 A----CATC----A--T------TG-GT----TAATC---TTTC-TT--T----TCATGA--GAG----A-A-------C--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-A
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            5007 62 +     22701 A----CATC----A--T------TG-GT----TAATC---TTTC-TT--T----TCATGA--GAG----A-A-------C--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-A
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5748964 62 +   9889416 A----CATC----A--T------TG-GT----TAATC---TTTC-TT--T----TCATGA--GAG----A-A-------C--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-A
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             5551 62 -    104377 A----CATC----A--T------TG-GT----TAATC---TTTC-TT--T----TCATGA--GAG----A-A-------C--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-A
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               5553 62 +     23246 A----CATC----A--T------TG-GT----TAATC---TTTC-TT--T----TCATGA--GAG----A-A-------C--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-A
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     3178 63 +      5067 A----CATC----A--T------TG-AT----TAATC---TCTCTTT--T----CCAGAA--GAG----A-A-------A--A-A----G---A--T-GTC------------------------TG-ATAT--GAAT----A-AAG-A-A--AA-A
i Aplodontia_rufa.AprRuf_scaffold_156013                I 17 C 0
s Arctocebus_calabarensis.k141_587554                         420 61 +      9265 A----CATC----A--G------TG-GT----TAATC---TTTA-TT--T----TCATGA--GAG----G-A-------A--A-A----G---A--T-GTC------------------------TG-ATAT--GCAT----A-AAG-G-T--A--A
i Arctocebus_calabarensis.k141_587554                   I 13 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 8166 66 -     29036 G----CAGT----A--T------GG-GT----TAGTC---TTTA-TT--G----TCAGAA--GAA----AAAAAA----A--A-A----G---A--T-GTC------------------------TA-ATAT--AAAT----A-GA--G-C-TAA-A
i Artibeus_jamaicensis.ArtJam_scaffold_41619            I 18 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9538812 62 +  39197703 A----CACC----A--C------TG-GT----TAGTC---TTTA-TT--T----TCATGA--GAG----A-A-------C--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-A
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             60083 62 +     85812 A----CACC----A--C------TG-GT----TAATC---TTTA-TT--T----TCATGA--GAG----A-A-------C--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-A
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                11095 62 +     89302 A----CACC----A--C------TG-GT----TAATC---TTTA-TT--T----TCATGA--GAG----A-A-------C--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-A
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             15600 62 -     58268 A----CACC----A--C------TG-GT----TAGTC---TTTA-TT--T----TCATGA--GAG----A-A-------C--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-A
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             63591 62 +    119057 A----CACC----A--C------TG-GT----TAATC---TTTA-TT--T----TCATGA--GAG----A-A-------C--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-A
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               5560 62 -     25888 A----CACC----A--C------TG-GT----TAATC---TTTA-TT--T----TCATGA--GAG----A-A-------C--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-A
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 6218 62 -     16375 A----CATT----A--C------TA-GT----TAATC---TTTA-TT--C----TCAGGA--GAG----G-A-------A--A-A----G---A--T-GTC------------------------TG-ATAT--GAAT----A-AAG-A-T--AA-A
i Avahi_laniger.k141_2840928                            I 12 C 0
s Avahi_peyrierasi.k141_2689020                              2538 62 +      2719 A----CATT----A--C------TA-GT----TAATC---TTTA-TT--C----TCAGGA--GAG----G-A-------A--A-A----G---A--T-GTC------------------------TG-ATAT--GAAT----A-AAG-A-T--AA-A
i Avahi_peyrierasi.k141_2689020                         I 12 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26379578 36 +  51448160 a----cacc----a--c------tg-AT----TGCTC---Ttca-tt--t----tcagaa--gag----a-a-------a--a--------------------------------------------------------------------------
i Balaenoptera_acutorostrata.KI537095.1                 I 18 I 26
s Balaenoptera_bonaerensis.DF502048.1                        4809 36 -     13118 a----cacc----a--c------tg-AT----TGCTC---Ttca-tt--t----tcagaa--gag----a-a-------a--a--------------------------------------------------------------------------
i Balaenoptera_bonaerensis.DF502048.1                   I 18 I 26
s Beatragus_hunteri.BeaHun_scaffold_21644                   42615 34 -     72089 A----TACC----A--C------TG-AT----TGCTC---TTTA-TT--T----CCAGAA--GAG----A-A-------------------------------------------------------------------------------------
i Beatragus_hunteri.BeaHun_scaffold_21644               I 18 I 27
s Bison_bison.KN264915.1                                  6559289 34 +   6870073 A----CACC----A--T------TG-AT----TGCTC---TTTA-TT--T----CCAGAA--GAG----A-A-------------------------------------------------------------------------------------
i Bison_bison.KN264915.1                                I 18 I 28
s Bos_indicus.CM003021.1                                138139393 34 - 161108492 A----CACC----A--T------TG-AT----TGCTC---TTTA-TT--T----CCAGAA--GAG----A-A-------------------------------------------------------------------------------------
i Bos_indicus.CM003021.1                                I 18 I 28
s Bos_mutus.JH883513.1                                     571930 34 -    998990 A----CACC----A--T------TG-AT----TGCTC---TTTA-TT--T----CCAGAA--GAG----A-A-------------------------------------------------------------------------------------
i Bos_mutus.JH883513.1                                  I 18 I 28
s Bos_taurus.CM000177.6                                 136295126 34 - 158972876 A----CACC----A--T------TG-AT----TGCTC---TTTA-TT--T----CCAGAA--GAG----A-A-------------------------------------------------------------------------------------
i Bos_taurus.CM000177.6                                 I 18 I 28
s Bubalus_bubalis.KI419065.1                              1232209 34 -   1914593 A----CACC----A--C------TG-AT----TTCTC---CTTA-TT--T----CCAGAA--GAG----A-A-------------------------------------------------------------------------------------
i Bubalus_bubalis.KI419065.1                            I 18 I 28
s Cacajao_ayresi.k141_724503                               113450 62 -    171031 A----CACC----A--T------TG-GT----TGATC---TTTA-TT--T----TCACAA--GAG----A-A-------C--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-T
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 12481 62 +    125063 A----CACC----A--T------TG-GT----TGATC---TTTA-TT--T----TCACAA--GAG----A-A-------C--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-T
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                14526 62 -    216513 A----CACC----G--T------TG-GT----TGATC---TTTA-TT--T----TCACAA--GAG----A-A-------C--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-T
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        7066 62 -    134917 A----CACC----A--T------TG-GT----TGATC---TTTA-TT--T----TCACAA--GAG----A-A-------C--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAA-G-T--AA-T
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3219029 30 -   8989139 ----------------------------------------------------------------------------------a-a----a---a--t-gtc------------------------ta-atat--aaataaagt-tt--a-t--at-a
i Camelus_bactrianus.KN276303.1                         I 47 C 0
s Camelus_dromedarius.KN271192.1                           396733 30 -  15254737 ----------------------------------------------------------------------------------a-a----a---a--t-gtc------------------------ta-atat--aaataaagt-tt--a-t--at-a
i Camelus_dromedarius.KN271192.1                        I 47 C 0
s Camelus_ferus.KB016973.1                                2972466 30 +   6889770 ----------------------------------------------------------------------------------a-a----a---a--t-gtc------------------------ta-atat--aaataaagt-tt--a-t--at-a
i Camelus_ferus.KB016973.1                              I 47 C 0
s CanFam4.chr31                                          11518892 64 +  39901454 A----CACC----A--C------CAGGC----TACTC---TTCA-TT--T----GCAGAA--GAG----A-AA------A--A-A----A---A--G-GTC------------------------TA-TTAT--GAAT----A-AA-GG-T--AA-A
i CanFam4.chr31                                         I 18 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   13917 64 +     87036 A----CACC----A--C------CAGGC----TACTC---TTCA-TT--T----GCAGAA--GAG----A-AA------A--A-A----A---A--G-GTC------------------------TA-TTAT--GAAT----A-AA-GG-T--AA-A
i Canis_lupus_VD.CanFam_VD_scaffold_16982               I 18 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11265559 64 -  35597290 A----CACC----A--C------CAGGC----TACTC---Ttca-tt--t----gcagaa--gag----a-a------aa--a-a----a---a--g-gtc------------------------ta-ttat--gaat----a-aa-gg-t--aA-A
i Canis_lupus_dingo.QKWQ01001993.1                      I 18 C 0
s Canis_lupus_familiaris.chr31                           11088093 64 +  39895921 A----CACC----A--C------CAGGC----TACTC---Ttca-tt--t----gcagaa--gag----a-a------aa--a-a----a---a--g-gtc------------------------ta-ttat--gaat----a-aa-gg-t--aA-A
i Canis_lupus_familiaris.chr31                          I 18 C 0
s Canis_lupus_orion.HG994411.1                           16455108 64 -  44759192 A----CACC----A--C------CAGGC----TACTC---TTca-tt--t----gcagaa--gag----a-a------aa--a-a----a---a--g-gtc------------------------ta-ttat--gaat----a-aa-gg-t--aA-A
i Canis_lupus_orion.HG994411.1                          I 18 C 0
s Capra_aegagrus.CM003214.1                              21324628 34 + 157394656 A----CACC----A--C------TG-AT----TGCTC---CTTA-TT--T----CCAGAA--GAG----A-A-------------------------------------------------------------------------------------
i Capra_aegagrus.CM003214.1                             I 18 I 27
s Capra_hircus.CM004562.1                               135705855 34 - 157403528 A----CACC----A--C------TG-AT----TGCTC---CTTA-TT--T----CCAGAA--GAG----A-A-------------------------------------------------------------------------------------
i Capra_hircus.CM004562.1                               I 18 I 27
s Carlito_syrichta.NW_007248099.1                          308501 62 +    345090 A----CTCT----A--C------TG-GC----TAATC---TTtg-tt--t----ttagaa--gag----a-a-------a--a-a----g---a--t-gtc------------------------TG-ATAT--GAAT----A-AAG-G-T--AA-a
i Carlito_syrichta.NW_007248099.1                       I 12 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               58955 70 +     67245 G----AAGT----A--C------AG-CT----TAGTC---TTTA-TT--G----TCAGAA--GAA----AAAAAAAAAAA--A-A----G---A--T-GTC------------------------TA-ATAC--AAAT----A-GA--G-C-TAA-A
i Carollia_perspicillata.CarPer_scaffold_4436           I 18 C 0
s Castor_canadensis.CasCan_scaffold_47037                   30185 54 +     33760 A----CTTC----A--T------TA-GT----TAATC---TTTG-TT--T----TCAGAA--A------C-A-------A--A-T----G---A--T-ACC------------------------TG-ATAT--GAAT----A-AA-----------
i Castor_canadensis.CasCan_scaffold_47037               I 21 I 4
s Catagonus_wagneri.CatWag_scaffold_1305                   158299 71 -    276539 A----CACC----A--C------TG-AT----TGCTCCTCTTTA-TG--T----TCAGGA--GAGAGGGA-AA------A--A-A----A---A--A-GTC------------------------TA-ACAT--GGATAAAGT-TA--A-G--A---
i Catagonus_wagneri.CatWag_scaffold_1305                I 9 C 0
s Cavia_aperea.AVPZ01000278.1                            15786060 15 -  24422027 -------N----NN--N------NN-NN----NNNNN---NN-------------------------------------------------------------------------------------------------------------------
i Cavia_aperea.AVPZ01000278.1                           I 17 I 94
s Cavia_porcellus.DS562889.1                             15797994 40 -  24440124 -------A-C---A--A------TA-GT----GAATA---TGTa-tt--t----tcataa--agt----a-a-------a-aa-a----g---t--t-gt---------------------------------------------------------
i Cavia_porcellus.DS562889.1                            I 17 I 15
s Cavia_tschudii.CavTsc_scaffold_488                       176185 40 +    436027 -------A-C---A--A------TA-GT----GAATA---TGTA-TT--T----TCATAA--AGT----A-A-------A-AA-A----G---T--T-GT---------------------------------------------------------
i Cavia_tschudii.CavTsc_scaffold_488                    I 17 I 15
s Cebus_albifrons.Contig22                               18890295 62 -  29618158 A----CACC----A--C------TG-GT----TAATC---TTCC-TT--T----TCATGA--GAG----A-A-------C--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAT-G-T--AA-A
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 7839 62 -     26817 A----CACC----A--C------TG-GT----TAATC---TTCC-TT--T----TCATGA--GAG----A-A-------C--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAT-G-T--AA-A
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                12079 62 +     25043 A----CACC----A--C------TG-GT----TAATC---TTCC-TT--T----TCATGA--GAG----A-A-------C--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAT-G-T--AA-A
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         7535 62 +     21754 A----CTCC----A--C------TG-GC----TAATC---TTTA-TT--T----TTAGAA--GAG----A-A-------A--A-A----G---A--T-GCC------------------------TG-ATAT--GAAT----A-AAG-G-T--AA-A
i Cephalopachus_bancanus.k141_702587                    I 12 C 0
s Ceratotherium_simum.JH767818.1                          4363310 60 +   7569818 A----CAGA----A--C------TG-AG----TATTc---t--a-tt--t----tcagaa--gag----a-a------aa--a-a----g---a--t-gtc------------------------tA-ATAt--gaat----a-aa--g-g--ta-a
i Ceratotherium_simum.JH767818.1                        I 18 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         3065 60 -      9338 A----CAGA----A--C------TG-AG----TATTC---T--A-TT--T----TCAGAA--GAG----A-AA------A--A-A----G---A--T-GTC------------------------TA-ATAT--GAAT----A-AA--G-G--TA-A
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    I 18 C 0
s Cercocebus_atys.KQ010443.1                              6554735 61 +   6739814 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-GTAT--GAAT----A-AAG-G-T--AA-A
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      26212 61 +     60454 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-GTAT--GAAT----A-AAG-G-T--AA-A
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          1417 61 -     21101 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-A
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         58727 61 -    107033 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-GTAT--GAAT----A-AAG-G-T--AA-A
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        1619 61 -     17608 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--AAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-GTAT--GAAT----A-AAG-G-T--AA-A
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          29114 61 +     30494 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--AAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-GTAT--GAAT----A-AAG-G-T--AA-A
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          57960 61 -     59240 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--AAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-GTAT--GAAT----A-AAG-G-T--AA-A
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          1661 61 +     16677 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-GTAT--GAAT----A-AAG-G-T--AA-A
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           23819 61 +     35983 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-GTAT--GAAT----A-AAG-G-T--AA-A
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11990347 61 +  12117833 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--AAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-GTAT--GAAT----A-AAG-G-T--AA-A
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46477105 61 +  46592721 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-GTAT--GAAT----A-AAG-G-T--AA-A
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      40656 61 -     45581 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-GTAT--GAAT----A-AAG-G-T--AA-A
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       1662 61 +     35577 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--AAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-GTAT--GAAT----A-AAG-G-T--AA-A
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        1438 61 -     25661 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--AAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-GTAT--GAAT----A-AAG-G-T--AA-A
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        1416 61 -     17744 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCCGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-GTAT--GAAT----A-AAG-G-T--AA-A
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        21032 61 +     37128 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--AAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-GTAT--GAAT----A-AAG-G-T--AA-A
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           2243 61 -      6963 a----tacc----a--c------AA-AT----TGCTC---TTTA-TT--T----TCAGTC--TAG----A-A-------A--A-A----T---A--T-GCC------------------------TG-CTGT--GAAT----A--AG-G-T--AA-A
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      I 17 C 0
s Cheirogaleus_major.k141_1157592                           58508 55 -     68416 -----------------------TC-AC----TAATC---TTTA-TT--C----TTAGGA--GAG----G-A-------A--A-A----C---A--T-GTC------------------------TG-ATAT--GAAT----A-AAG-A-T--AA-A
i Cheirogaleus_major.k141_1157592                       I 15 C 0
s Cheirogaleus_medius.k141_133808                            7551 55 +     13308 -----------------------TC-AC----TAATC---TTTA-TT--C----TTAGGA--GAG----G-A-------A--A-A----C---A--T-GTC------------------------TG-ATAT--GAAT----A-AAG-A-T--AA-A
i Cheirogaleus_medius.k141_133808                       I 15 C 0
s Cheracebus_lucifer.k141_619653                             5096 62 -     18223 A----CACC----A--C------TG-GT----TGATC---CCTA-TT--T----TCACAA--GAG----A-A-------C--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-T
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             22119 62 +     25473 A----CACC----A--C------TG-GT----TGATC---CCTA-TT--T----TCACAA--GAG----A-A-------C--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-T
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           41154 62 +     57117 A----CACC----A--C------TG-GT----TGATC---CCTA-TT--T----TCACAA--GAG----A-A-------C--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-T
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          45833 62 +     54541 A----CACC----A--C------TG-GT----TGATC---CCTA-TT--T----TCACAA--GAG----A-A-------C--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-T
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15961215 62 +  43084221 -------ATC-TCC--T------Tg-gt----taatc---ttta-tt--t----tcataa--aat----a-c-------a--a-a----g---t--t-gtc------------------------tg-atat--gaat----a-aaa-g-a--aa-a
i Chinchilla_lanigera.JH721867.1                        I 21 C 0
s Chiropotes_israelita.k141_1189915                         70657 62 +    196370 A----CACC----A--C------TG-GT----TCATC---TTTA-TT--T----TCACAA--GAG----A-A-------C--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-T
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          14837 62 +     40510 A----CACC----A--C------TG-GT----TCATC---TTTA-TT--T----TCACAA--GAG----A-A-------C--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-T
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15138578 61 -  15256731 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-GTAT--GAAT----A-AAG-G-T--AA-A
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      33625 61 -     53260 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-GTAT--GAAT----A-AAG-G-T--AA-A
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101144189 61 + 101219884 A----TA-T----A--C------TG-GC----TAATC---TTTA-TT--T----GCAGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-GTAT--GAAT----A-AAG-G-T--AA-A
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                15920 63 -     21363 A----CATC----A--C------TA-GC----TGCTC---TTTA-TT--T----TCAGGG--AAG----A-AA------A--A-A----T---T--T-GCC------------------------TA-CTGT--TAAT----A-AAA-G-T--AA-A
i Choloepus_didactylus.ChoDid_scaffold_36182            I 15 C 0
s Choloepus_hoffmanni.KN194586.1                           761227 63 +    964067 A----CATC----A--C------TA-GC----TGCTC---CTTA-TT--T----TCAGGG--AAG----A-AA------A--A-A----T---T--T-GCC------------------------TA-CTGT--TAAT----A-AAC-G-T--AA-A
i Choloepus_hoffmanni.KN194586.1                        I 15 C 0
s Colobus_angolensis.KN985967.1                          10885955 61 +  10971483 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-A
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147664119 61 + 156195979 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-A
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            16104 61 +     23629 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-A
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60612932 47 +  78930452 A----CACC----A--C------TA-AT----AACAC---T--C-TG--T----TAAGAT--GTT----A-AA------C--A-A----G---A--T-GTC------------------------TA-ATA--------------------------
i Condylura_cristata.JH655880.1                         I 23 I 3
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         39128 62 -     40477 a----catt----a--c------tg-AC----TACTC---T-TA-CT--T----ATAGAA--GAG----A-AA------C--A-A----G---A--T-GTC------------------------TA-ATAC--AAAT----A-AA--G-G-TAA-A
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     I 18 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 278013 60 -    399297 A----TTTG----T--A------AG-GT----TAATC---CCTA-TT--T-----CATC----AG----A-A-------A--A-A----G---A--T-ATC------------------------TAAACAT--GAAT----A-AGG-G-A--AA-A
i Cricetomys_gambianus.CriGam_scaffold_949              I 17 C 0
s Cricetulus_griseus.LT883672.1                          53028708 28 +  72327488 ------------------------------------------------------------------------------------G--ACA---A--T-GTC------------------------TA-ACAT--GAAT----A-ATG-G-A--AA-A
i Cricetulus_griseus.LT883672.1                         I 42 C 0
s Crocidura_indochinensis.CroInd_scaffold_88140              1498 17 +     11655 ---------------------------------------------------------------------------------------------------------------------------------TGTAAAAAG----G-TT--A-A--AA-A
i Crocidura_indochinensis.CroInd_scaffold_88140         N 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            51444 37 -     70449 A----TAAC----A--C------CAGGT----TACTC-----TG-TT--T----TCACAA--GAG----A-AA------A--A-A------------------------------------------------------------------------
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 18 I 23
s Ctenodactylus_gundi.CteGun_scaffold_447                  207625 37 -    956709 C----TAAC----A--T------TG-GT----CAATT---TTTA-TT--T----TCAAGA--GAT----A-A-------A--A-A------------------------------------------------------------------------
i Ctenodactylus_gundi.CteGun_scaffold_447               I 17 I 23
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 30211 30 -     67205 ------------------------G-TC----TAACC---TTTA-TG--T----TCATAA--AGT----A-C-------A--A-A----C-------------------------------------------------------------------
i Ctenomys_sociabilis.CteSoc_scaffold_19489             I 14 I 22
s Cuniculus_paca.CunPac_flattened_line_16637                17231 62 +     26546 -------ACC-TCA--A------TG-GT----TAATC---TGTA-TT--T----TCATAA--AAT----A-A-------A--A-A----G---T--T-GTC------------------------TG-ATAT--GAAT----A-AAA-G-A--AA-A
i Cuniculus_paca.CunPac_flattened_line_16637            I 21 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             58317 62 -    236241 -------ACC-TCA--A------TA-GT----TAATC---TCTA-TT--T----TCATAA--AGT----A-A-------A--A-A----G---T--T-GTC------------------------TG-ATAT--GAAT----A-AAA-G-A--AA-A
i Dasyprocta_punctata.DasPun_flattened_line_634         I 21 C 0
s Dasypus_novemcinctus.JH568778.1                          183116 62 -   6883506 a----cacc----a--c------AA-AT----TGCTC---TTTA-TT--T----TCAGAG--GAG----A-A-------A--A-A----T---A--T-GCC------------------------TG-CTGT--GAAT----A-CAG-G-T--GA-A
i Dasypus_novemcinctus.JH568778.1                       I 17 C 0
s Daubentonia_madagascariensis.ctg11                     16844361 62 +  31942871 A----TATC----A--C------TG-GT----TAATC---ATTA-TT--C----TCAGAA--GAG----G-A-------A--A-A----G---A--T-GTC------------------------TG-ATAT--GAAT----A-AAG-G-T--AA-A
i Daubentonia_madagascariensis.ctg11                    I 12 C 0
s Delphinapterus_leucas.KZ290064.1                       80036256 36 -  96802777 a----cacc----a--c------tg-AT----TGCTC---ttca-tt--t----tcagaa--gaa----a-a-------a--a--------------------------------------------------------------------------
i Delphinapterus_leucas.KZ290064.1                      I 18 I 26
s Desmodus_rotundus.KZ672188.1                           18698235 37 -  18957592 G----CACT----A--C------AG-GT----AAGTC---Ttta-tt--t----tcaggg--gaa----a-a-----aaa-----------------------------------------------------------------------------
i Desmodus_rotundus.KZ672188.1                          I 18 I 24
s Dicerorhinus_sumatrensis.PEKH010003161.1                 321962 60 +    993696 A----CAGA----A--C------TG-AG----TATTc---t--a-tt--t----tcagaa--gag----a-a------aa--a-a----g---a--t-gtc------------------------TA-ATAt--gaat----a-aa--g-g--ta-a
i Dicerorhinus_sumatrensis.PEKH010003161.1              I 18 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   2612 60 +    151128 A----CAGA----A--C------TG-AG----TATTC---T--A-TT--T----TCAGAA--GAG----A-AA------A--A-A----G---A--T-GTC------------------------TA-ATAT--GAAT----A-AA--G-G--TA-A
i Diceros_bicornis.DicBicMic_scaffold_9545              I 18 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   156472 62 +    228994 -------ACC-TCA--T------TA-GT----TAATC---CTTA-TT--T----TCATGA--AAT----A-C-------A--A-G----G---T--T-GTC------------------------TG-ATAT--GAAT----A-AAA-G-A--AA-A
i Dinomys_branickii.DinBra_scaffold_1996                I 21 C 0
s Dipodomys_ordii.KN672545.1                              3655583 56 +   4240102 A----ATTC----C--C------TG-AT----TTCTA---TTAA-TA--T----CCAGGA--Aag----a-c-------a--a-a----t---a--t-ata------------------------aa-gtat--gaaa----a-at-----------
i Dipodomys_ordii.KN672545.1                            I 21 I 2
s Dipodomys_stephensi.DipSte_scaffold_44365                 27216 56 +     28912 A----ATTC----C--C------TG-AT----TTCTA---TTAA-TA--T----CCATGA--AAG----A-C-------A--C-A----T---A--T-ATA------------------------AA-ATAT--GAAA----A-AT-----------
i Dipodomys_stephensi.DipSte_scaffold_44365             I 21 I 2
s Dolichotis_patagonum.DolPat_scaffold_14102                35572 59 -     73477 -------A-C---A--A------TA-GT----TAATC---TTTA-TT--T----TCATAA--AGT----C-A-------A--A-A----G---T--T-ATC------------------------TG-ATAT--GAGT----A-CAA-G-A--AA-A
i Dolichotis_patagonum.DolPat_scaffold_14102            I 22 C 0
s Echinops_telfairi.JH980316.1                           22994632 34 -  44670279 A----CATC----A--C------TG-GT----TGCTC---TTTG-tt--t----tcagga--aac----a-a-------------------------------------------------------------------------------------
i Echinops_telfairi.JH980316.1                          I 5 I 27
s Eidolon_helvum.KE772537.1                                 11658 64 +     24177 a----cact----a--c------tg-GT----CAATC---Tgta-tt--t----tcagaa--gag----a-a-----aaa--a-a----g---a--t-gtc------------------------ta-ATAT--GAAT----A-AA--G-G-TAA-A
i Eidolon_helvum.KE772537.1                             I 18 C 0
s Ellobius_lutescens.LOEQ01003611.1                        239273 27 -    369425 ------------------------------------------------------------------------------------A---AG---A--T-GTC------------------------TA-ACAT--GAAT----A-AGG-G-A--AT-A
i Ellobius_lutescens.LOEQ01003611.1                     I 48 C 0
s Ellobius_talpinus.LOJH01090055.1                           6387 27 -      7838 ------------------------------------------------------------------------------------A---AG---A--T-GTC------------------------TA-ACAT--GAAT----A-AGG-A-A--AT-A
i Ellobius_talpinus.LOJH01090055.1                      I 47 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1490903 34 +   1727528 A----CACA----A--C------TG-AT----TGCTC---TTTA-TT--T----CCAGAA--GAG----A-A-------------------------------------------------------------------------------------
i Elaphurus_davidianus.JRFZ01086400.1                   I 18 I 28
s Enhydra_lutris.KZ291749.1                              85871594 66 +  99434291 A----CAAC----A--C------CAGGT----TGTTC---TCCG-Tt--t----tcagaa--gat---taaa------aa--a-a----g---a--g-gtc------------------------TG-TTAT--GAAT----A-AA-GG-T--AA-A
i Enhydra_lutris.KZ291749.1                             I 19 C 0
s Eptesicus_fuscus.JH977687.1                             4703640 46 +   6522550 -----------------------------------------CTA-Tt--t----tcagaa--gaa----g-g------aa--a-a----g---a--t-gTC------------------------TA-AGAG--GAAT----A-AA--g-gt-aa-a
i Eptesicus_fuscus.JH977687.1                           I 25 C 0
s Equus_asinus.JREZ01000062.1                             5852362 61 -   7175178 A----CACA----A--C------TG-AT----TAGTc---t--a-tt--t----ttagaa--gag----a-a-----aaa--a-a----g---a--c-atg------------------------ta-aCAT--GAAT----A-GA--G-G--TA-A
i Equus_asinus.JREZ01000062.1                           I 18 C 0
s Equus_caballus.CM000402.2                              13350865 61 +  41866177 A----CACA----A--C------TG-AT----TAGTC---T--a-tt--t----ttagga--gag----a-a-----aaa--a-a----g---a--c-atg------------------------ta-aTAT--GAAT----A-GA--G-G--TA-A
i Equus_caballus.CM000402.2                             I 18 C 0
s Equus_przewalskii.ATBW01073585.1                          12355 61 +     92910 A----CACA----A--C------TG-AT----TAGTC---T--a-tt--t----ttagga--gag----a-a-----aaa--a-a----g---a--c-atg------------------------ta-aTAT--GAAT----A-GA--G-G--TA-A
i Equus_przewalskii.ATBW01073585.1                      I 18 C 0
s Erythrocebus_patas.Contig8                             48770756 61 -  48907691 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-GTAT--GAAT----A-AAG-G-T--AA-A
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          314462 36 +    330699 a----cacc----a--c------tg-AT----TGCTT---TTCA-TT--T----TCAGAA--GAG----A-A-------A--A--------------------------------------------------------------------------
i Eschrichtius_robustus.EscRob_flattened_line_685       I 18 I 26
s Eubalaena_japonica.EubJap_flattened_line_7756             60916 36 +     89355 a----cacc----a--c------tg-AT----TGCTC---TTCA-TT--T----TCAGAA--GAG----A-A-------A--A--------------------------------------------------------------------------
i Eubalaena_japonica.EubJap_flattened_line_7756         I 18 I 26
s Eulemur_albifrons.k141_715837                              4552 62 +     13586 A----CATC----A--C------TA-GT----TAATC---TTTA-TT--C----TCAGGA--GAG----G-A-------A--A-A----G---A--T-GTC------------------------TG-ATAT--GAAT----A-AAG-A-T--AA-A
i Eulemur_albifrons.k141_715837                         I 12 C 0
s Eulemur_collaris.k141_311830                               4489 62 -      6809 A----CATC----A--C------TA-GT----TAATC---TTTA-TT--C----TCAGGA--GAG----G-A-------A--A-A----G---A--T-GTC------------------------TG-ATAT--GAAT----A-AAG-A-T--AA-A
i Eulemur_collaris.k141_311830                          I 12 C 0
s Eulemur_coronatus.k141_3240342                            10962 62 +     36558 A----CATC----A--C------TA-GT----TAATC---TTTA-TT--C----TCAGGA--GAG----G-A-------A--A-A----G---A--T-GTC------------------------TG-ATAT--GAAT----A-AAG-A-T--AA-A
i Eulemur_coronatus.k141_3240342                        I 12 C 0
s Eulemur_flavifrons.k141_903901                             7281 62 +     60246 A----CATC----A--C------TA-GT----TAATC---TTTA-TT--C----TCAGGA--GAG----G-A-------A--A-A----G---A--T-GTC------------------------TG-ATAT--GAAT----A-AAG-A-T--AA-A
i Eulemur_flavifrons.k141_903901                        I 12 C 0
s Eulemur_fulvus.k141_653297                                10760 62 +    109717 A----CATT----A--C------TA-GT----TAATC---TTTA-TT--C----TCAGGA--GAG----G-A-------A--A-A----G---A--T-GTC------------------------TG-ATAT--GAAT----A-AAG-A-T--AA-A
i Eulemur_fulvus.k141_653297                            I 12 C 0
s Eulemur_macaco.k141_1341545                               15143 62 +     16540 A----CATC----A--C------TA-GT----TAATC---TTTA-TT--C----TCAGGA--GAG----G-A-------A--A-A----G---A--T-GTC------------------------TG-ATAT--GAAT----A-AAG-A-T--AA-A
i Eulemur_macaco.k141_1341545                           I 12 C 0
s Eulemur_mongoz.k141_825972                                15416 62 +     27497 A----CATC----A--C------TA-GT----TAATC---TTTA-TT--C----TCAGGA--GAG----G-A-------A--A-A----G---A--T-GTC------------------------TG-ATAT--GAAT----A-AAG-A-T--AA-A
i Eulemur_mongoz.k141_825972                            I 12 C 0
s Eulemur_rubriventer.k141_411740                           17873 62 +     26808 A----CATC----A--C------TA-GT----TAATC---TTTA-TT--C----TCAGGA--GAG----G-A-------A--A-A----G---A--T-GTC------------------------TG-ATAT--GAAT----A-AAG-A-T--AA-A
i Eulemur_rubriventer.k141_411740                       I 12 C 0
s Eulemur_rufus.k141_1620292                                32608 62 +     46535 A----CATC----A--C------TA-GT----TAATC---TTTA-TT--C----TCAGGA--GAG----G-A-------A--A-A----G---A--T-GTC------------------------TG-ATAT--GAAT----A-AAG-A-T--AA-A
i Eulemur_rufus.k141_1620292                            I 12 C 0
s Eulemur_sanfordi.k141_186399                              15330 62 -     29447 A----CATC----A--C------TA-GT----TAATC---TTTA-TT--C----TCAGGA--GAG----G-A-------A--A-A----G---A--T-GTC------------------------TG-ATAT--GAAT----A-AAG-A-T--AA-A
i Eulemur_sanfordi.k141_186399                          I 12 C 0
s Felis_catus.CM001386.2                                129892408 28 - 159252932 ---------------------------T----TACTC---TTTG-TT--T----TCACAA--GAG----A-AA------A--A-A------------------------------------------------------------------------
i Felis_catus.CM001386.2                                I 22 I 23
s Felis_catus_fca126.CM031420.1                         129279477 28 - 158578461 ---------------------------T----TACTC---TTTG-TT--T----TCACAA--GAG----A-AA------A--A-A------------------------------------------------------------------------
i Felis_catus_fca126.CM031420.1                         I 22 I 23
s Felis_nigripes.FelNig_flattened_line_8080                 20622 28 +     52776 ---------------------------T----TACTC---TTTG-TT--T----TCACAA--GAG----A-AA------A--A-A------------------------------------------------------------------------
i Felis_nigripes.FelNig_flattened_line_8080             I 22 I 23
s Galago_moholi.ctg555                                     210295 62 -    847004 A----CATC----A--C------TG-GT----TAATC---TTTA-TT--T----TCATGG--GAG----G-A-------A--A-A----G---A--T-GTC------------------------TG-ATAT--GAAT----A-AAC-G-T--AA-A
i Galago_moholi.ctg555                                  I 13 C 0
s Galago_senegalensis.k141_964197                           12674 62 -     43889 A----CATC----A--C------TG-GT----TAATC---TTTA-TT--T----TCATGG--GAG----G-A-------A--A-A----G---A--T-GTC------------------------TG-ATAT--GAAT----A-AAC-G-T--AA-A
i Galago_senegalensis.k141_964197                       I 13 C 0
s Galagoides_demidoff.k141_1769638                           9751 62 +     27357 A----CATC----A--C------TG-GT----TAATC---TTTA-TT--T----TCATGG--GAG----G-A-------A--A-A----G---A--T-GTC------------------------TG-ATAT--GAAT----A-AAG-G-T--AA-A
i Galagoides_demidoff.k141_1769638                      I 13 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               155739 63 +    324696 A----CATC----A--C------TG-GT----TAATC---TTTA-TT--T----CCGAAA--GAG-G--A-A-------A--A-A----T---A--C-GTC------------------------TG-ACAT--GAAT----A-AAG-G-T--AA-A
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    180700 34 -    189561 a----cacc----a--c------tg-AT----TGCTC---TTTA-TA--T----CCTGAA--GAG----A-A-------------------------------------------------------------------------------------
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 18 I 28
s Glis_glis.GliGli_scaffold_79770                           12545 62 -     18683 A----TATC----A--T------TG-GT----AAATC---TTTA-TT--T----CCAGGA--TAG----A-A-------A--A-A----G---A--T-GAC------------------------TG-ATAT--GAAT----A-AAT-G-A--AA-A
i Glis_glis.GliGli_scaffold_79770                       I 17 C 0
s Gorilla_beringei.k141_111300                               4821 62 -     14630 A----CACC----A--C------TG-GC----TCATC---TTTA-TT--T----TCAGGA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-A
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119651920 62 - 195582420 A----CACC----A--C------TG-GC----TCATC---TTTA-TT--T----TCAGGA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-A
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   77090 62 +    118900 A----TATC----A--A------TG-GT----TAATC---TTTA-TT--T----CCAAGA--TAG----A-A-------A--A-A----G---A--T-GTA------------------------TG-ATAT--GAAT----A-AAT-G-A--AA-A
i Graphiurus_murinus.GraMur_scaffold_4493               I 17 C 0
s Hapalemur_alaotrensis.k141_1280836                         1335 62 +     10286 A----CATC----A--C------TA-GT----TAATC---TTTA-TT--C----TCAGGA--GAG----G-A-------A--A-A----T---A--T-GTC------------------------TG-ATAT--GAAT----A-AAG-A-T--AA-A
i Hapalemur_alaotrensis.k141_1280836                    I 12 C 0
s Hapalemur_gilberti.k141_1254239                            9511 62 +      9690 A----CATC----A--C------TA-GT----TAATC---TTTA-TT--C----TCAGGA--GAG----G-A-------A--A-A----T---A--T-GTC------------------------TG-ATAT--GAAT----A-AAG-A-T--AA-A
i Hapalemur_gilberti.k141_1254239                       I 12 C 0
s Hapalemur_griseus.k141_1387522                             5141 62 +     56096 A----CATC----A--C------TA-GT----TAATC---TTTA-TT--C----TCAGGA--GAG----G-A-------A--A-A----T---A--T-GTC------------------------TG-ATAT--GAAT----A-AAG-A-T--AA-A
i Hapalemur_griseus.k141_1387522                        I 12 C 0
s Hapalemur_meridionalis.k141_186231                        28391 62 -     42470 A----CATC----A--C------TA-GT----TAATC---TTTA-TT--T----TCAGGA--GAG----G-A-------A--A-A----T---A--T-GTC------------------------TG-ATAT--GAAT----A-AAG-A-T--AA-A
i Hapalemur_meridionalis.k141_186231                    I 12 C 0
s Hapalemur_occidentalis.k141_797938                        45014 62 -     54384 A----CATC----A--C------TA-GT----TAATC---TTTT-TT--C----TCAGGA--GAG----G-A-------A--A-A----T---A--T-GTC------------------------TG-ATAT--GAAT----A-AAG-A-T--AA-A
i Hapalemur_occidentalis.k141_797938                    I 12 C 0
s Helogale_parvula.HelPar_flattened_line_22962              16650 36 +     53719 A----TAAC----A--C------CAGGT----TACT-------G-TT--T----CCACAA--GAG----A-AA------A--ACA------------------------------------------------------------------------
i Helogale_parvula.HelPar_flattened_line_22962          I 18 I 23
s Hemitragus_hylocrius.HemHyl_scaffold_16669                26900 34 -     91191 A----CACC----A--C------TG-AT----TGCTC---TTTA-TT--T----CCAGAA--GAG----A-A-------------------------------------------------------------------------------------
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 18 I 27
s Heterocephalus_glaber.JH602058.1                        2550548 38 +  31725842 -------ACC-TCA--T------TG-gt----taatc---ttta-tt--t----tcataa--aat----a-a-------t--t-a----g-------------------------------------------------------------------
i Heterocephalus_glaber.JH602058.1                      I 21 I 24
s Heterohyrax_brucei.HetBruBak_scaffold_25354               56906 33 +     73687 a----cagc----C--C------TG-GT----TGGTC---TTTA-TT--T----TCAGGG--AAG----A---------------------------------------------------------------------------------------
i Heterohyrax_brucei.HetBruBak_scaffold_25354           I 5 I 27
s Hippopotamus_amphibius.HipAmp_scaffold_1308              146558 28 +    277961 --------------------------AT----TGCTC---TTTA-TT--T----TCAGAA--GAA----A-AA------A--A--------------------------------------------------------------------------
i Hippopotamus_amphibius.HipAmp_scaffold_1308           I 24 I 26
s Hipposideros_armiger.JXIK01001085.1                      277844 56 -    477199 ----------------c------TG-G-------CTc---t-ta-tt--t----acagaa--gaa----aaa-----aaa--a-a----g---a--t-gtc------------------------ta-atAT--GAAT----A-AA--G-gttaa-a
i Hipposideros_armiger.JXIK01001085.1                   I 21 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              6996 56 -      9143 ----------------c------TG-G-------CTC---T-TA-TT--T----ATAGAA--GAA----AAAAA-----A--A-A----G---A--T-GTC------------------------TA-ATAT--GAAT----A-AA--G-GTTAA-A
i Hipposideros_galeritus.HipGal_scaffold_104691         I 21 C 0
s Hoolock_leuconedys.ctg2404                                     604 62 -      6991 -----CACC----A--C------TG-GT----TAATC---TCTA-TT--T----TCAGGA--GAGA---A-A-------A--A-A----G---A--T-GTT------------------------TC-ATAC--GAAT----A-AAG-G-T--AA-A
i Hoolock_leuconedys.ctg2404                               n 354 n 354
s Hyaena_hyaena.HyaHya_flattened_line_20729                 16733 37 -     67322 A----TAAC----A--C------CAGGT----TACTC---TTTG-TT--T----T--CAT--GAA----A-AA------A--A-T------------------------------------------------------------------------
i Hyaena_hyaena.HyaHya_flattened_line_20729             I 18 I 22
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           18451 62 -    119109 -------A-CATCA--G------TA-GT----TAATC---TTTA-TT--T----TCATAA--AGT----C-A-------A--A-A----G---T--T-GTC------------------------TG-TTAT--GAAT----A-CAA-G-A--AA-A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       I 18 C 0
s Hylobates_abbotti.k141_493872                              4653 37 +      5897 A----CACC----A--C------TG-GT----TAATC---TCTA-TT--T----TCAGGA--GAGA---A-A-------A--A--------------------------------------------------------------------------
i Hylobates_abbotti.k141_493872                         C 0 I 25
s Hylobates_agilis.k141_624065                               1517 37 +      2112 A----CACC----A--C------TG-GT----TAATC---TCTA-TT--T----TCAGGA--GAGA---A-A-------A--A--------------------------------------------------------------------------
i Hylobates_agilis.k141_624065                          C 0 I 25
s Hylobates_klossii.k141_466549                             11093 37 +     11537 A----CACC----A--C------TG-GT----TAATC---TCTA-TT--T----TCAGGA--GAGA---A-A-------A--A--------------------------------------------------------------------------
i Hylobates_klossii.k141_466549                         C 0 I 25
s Hylobates_pileatus_b.ContigUN                                 14624198 37 -  25970782 A----CACC----A--C------TG-GT----TAATC---TCTA-TT--T----TCAGGA--GAGA---A-A-------A--A--------------------------------------------------------------------------
i Hylobates_pileatus_b.ContigUN                                C 0 I 25
s Hylobates_muelleri.k141_1389047                            1454 37 -      2977 A----CACC----A--C------TG-GT----TAATC---TCTA-TT--T----TCAGGA--GAGA---A-A-------A--A--------------------------------------------------------------------------
i Hylobates_muelleri.k141_1389047                       C 0 I 25
s Hystrix_cristata.HysCri_scaffold_50788                     5618 62 +     22540 A----CATC----A--T------AG-GA----TACTC---TTGC-TT--T----TTGTGA--AAT----A-A-------G--A-A----G---T--T-GTC------------------------TG-GCAC--GAAC----A-AAG-G-A--AA-A
i Hystrix_cristata.HysCri_scaffold_50788                I 17 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7125333 63 +  13083262 a----catc----a-ct------TG-GT----TATTA---TCTC-TT--T----CCAGGA--CAG----A-A-------A--A-A----G---A--T-GTc------------------------tg-atat--gaat----a-aaa-a-a--aa-a
i Ictidomys_tridecemlineatus.JH393315.1                 I 17 C 0
s Indri_indri.k141_4418183                                    982 62 -      1457 A----CATC----A--C------TA-GT----TAATC---TTTA-TT--C----TCAGGA--GAG----G-A-------A--A-A----G---A--T-GTC------------------------TG-ATAC--AAAT----A-AAG-G-T--AA-A
i Indri_indri.k141_4418183                              I 12 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               8456 36 +     17520 a----cacc----a--c------tg-AT----TGCTC---TTCA-TT--T----TCAGAA--GAG----A-A-------A--A--------------------------------------------------------------------------
i Inia_geoffrensis.IniGeo_flattened_line_66725          I 18 I 26
s Jaculus_jaculus.JH725517.1                              8565370 62 +  11848649 A----TTTc----a--a------ta-at----ttatc---ttta-tt--t----ccaaaa--gaa----a-a-------a--a-g----a---a--a-gtc------------------------tg-atat--tgat----g-aag-a-a--aa-a
i Jaculus_jaculus.JH725517.1                            I 17 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               23072 36 +     37189 a----cacc----a--t------tg-AT----TGCTC---TTCA-TT--T----TCAGAA--GAG----A-A-------A--A--------------------------------------------------------------------------
i Kogia_breviceps.KogBre_flattened_line_35920           I 18 I 26
s Lagothrix_lagothricha.k141_12968                          49680 62 -    147782 A----CACC----A--C------TG-GT----TAATC---TTTA-TT--T----TCATGA--GAG----A-A-------C--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-A
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   113730 47 -    115756 -----------------------------------------TTA-CT--T----TCAGAA--GAA----A-AAA-----A--A-A----G---A--T-GTC------------------------TA-AAAG--GAAT----A-AA--G-G-TAA-A
i Lasiurus_borealis.LasBor_scaffold_5102                I 24 C 0
s Lemur_catta.scaffold_1                                258406695 62 - 285822530 A----CATC----A--C------TA-GT----TAATC---TTTA-TT--C----TCAGGA--GAG----G-A-------A--A-A----T---A--T-GTC------------------------TG-ATAT--GAAT----A-AAG-A-T--AA-A
i Lemur_catta.scaffold_1                                I 12 C 0
s Lepilemur_ankaranensis.k141_884009                        23449 57 +     39228 A----CATC----A--C------CA-AT----TAATC---TTTA-TT--C----TCAGGA--GAG----G-A-------A--A-A----G---A--T-GTC------------------------TG-ATAT--GAAT----A-AAG----------
i Lepilemur_ankaranensis.k141_884009                    I 1 I 4
s Lepilemur_dorsalis.k141_134267                            52835 57 +     63517 A----CATC----A--C------TA-AT----TAATC---TTTA-TT--C----TCAGGA--GAG----G-A-------A--A-A----G---A--T-GTC------------------------TG-ATAT--GAAT----A-AAG----------
i Lepilemur_dorsalis.k141_134267                        I 12 I 4
s Lepilemur_ruficaudatus.k141_617879                        78092 57 +    116806 A----CATC----A--C------TA-AT----TAATC---TTTA-TT--C----TCAGGA--GAG----G-A-------A--A-A----G---A--T-GTC------------------------TG-ATAT--GAAT----A-AAG----------
i Lepilemur_ruficaudatus.k141_617879                    I 12 I 4
s Lepilemur_septentrionalis.k141_578524                     31088 57 -     33031 A----CATC----A--C------CA-AT----TAATC---TTTA-TT--C----TCAGGA--GAG----G-A-------A--A-A----G---A--T-GTC------------------------TG-ATAT--GAAT----A-AAG----------
i Lepilemur_septentrionalis.k141_578524                 I 1 I 4
s Leptonychotes_weddellii.KB714749.1                      3085438 30 -   3498232 -----------------------------------------------------------------------a------aa--a-a----g---a--g-gtc------------------------TG-TTAT--GAAT----A-AA-GG-T--AA-A
i Leptonychotes_weddellii.KB714749.1                    I 49 C 0
s Lepus_americanus.LepAme_scaffold_62849                    12734 63 +     22452 A----CATA----G--T------TG-GT----TAATC---T-TA-TT--T----TCAGGA--GAA----A-A-------AGAT-A----G---A--C-GTC------------------------TT-ATAT--GTAC----A-AAG-G-T--AA-A
i Lepus_americanus.LepAme_scaffold_62849                I 13 C 0
s Lipotes_vexillifer.KE558548.1                            135409 36 +   3060487 a----cacc----a--c------tg-AT----TGCTC---Ttca-tt--t----tcagaa--gag----a-a-------a--a--------------------------------------------------------------------------
i Lipotes_vexillifer.KE558548.1                         I 18 I 26
s Lophocebus_aterrimus.ctg55                             19247824 61 +  19376315 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-GTAT--GAAT----A-AAG-G-T--AA-A
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           10068 48 +     84689 A----CATC----A--C------TG-GT----TAATC---TTTA-TT--T----TCATGA--GAG----G-A-------A--A-A----G---A--T-GTC------------------------TG-ATA--------------------------
i Loris_lydekkerianus.k141_550999                       I 13 I 8
s Loris_tardigradus.ctg97                                 3777817 48 +   6799190 A----CATC----A--C------TG-GT----TAATC---TTTA-TT--T----TCATGA--GAG----G-A-------A--A-A----G---A--T-GTC------------------------TG-ATA--------------------------
i Loris_tardigradus.ctg97                               I 13 I 8
s Loxodonta_africana.GL010040.1                          20591502 34 -  62548349 a----CACC----A--C------TG-GT----CGCTC---TTTA-TT--T----ACAGGG--AAG----A-A-------------------------------------------------------------------------------------
i Loxodonta_africana.GL010040.1                         I 5 I 27
s Lycaon_pictus.CM007556.1                               11087549 64 +  39895028 A----CACC----A--C------CAGGC----TACTC---TTCA-ct--t----gcagaa--gag----a-a------aa--a-a----a---a--g-gtc------------------------ta-ttat--gaat----a-aa-gg-t--aA-A
i Lycaon_pictus.CM007556.1                              I 18 C 0
s Macaca_arctoides.k141_2201161                             19564 61 +     74745 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------AT-GTAT--GAAT----A-AAG-G-T--AA-A
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12706020 61 +  12821369 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------AT-GTAT--GAAT----A-AAG-G-T--AA-A
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                1665 61 -      3136 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-GTAT--GAAT----A-AAG-G-T--AA-A
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           46482 61 +     63263 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-GTAT--GAAT----A-AAG-G-T--AA-A
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                 1185 61 -      2568 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-GTAT--GAAT----A-AAG-G-T--AA-A
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 1771 61 -      7381 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-GTAT--GAAT----A-AAG-G-T--AA-A
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  44989 61 -     79256 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-GTAT--GAAT----A-AAG-G-G--AA-A
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196035097 61 + 196197964 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-A
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11445265 61 +  11645122 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-GTAT--GAAT----A-AAG-G-T--AA-A
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   3936 61 -     46448 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-GTAT--GAAT----A-AAG-G-T--AA-A
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                1608 61 -     13212 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------AT-GTAT--GAAT----A-AAG-G-T--AA-A
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 15289 61 -     55006 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TT-GTAT--GAAT----A-AAG-G-T--AA-A
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43840406 61 +  43892939 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-GTAT--GAAT----A-AAG-G-T--AA-A
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               16575 61 -     24607 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-GTAT--GAAT----A-AAG-G-T--AA-A
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               3941 61 -     27140 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-GTAT--GAAT----A-AAG-G-T--AA-A
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                701031 64 +    802869 a----catt----a--c------tg-GT----CAATC---TGTA-TT--T----TCTGAA--CAG----T-AGA-----A--A-A----G---A--T-ATC------------------------TA-ATAT--GAAT----A-AA--G-G-TAA-A
i Macroglossus_sobrinus.MacSob_scaffold_879             I 18 C 0
s Mandrillus_leucophaeus.scaffold125                     43436983 61 -  43563597 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-GTAT--GAAT----A-AAG-G-T--AA-A
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4449809 61 -   4543643 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-GTAT--GAAT----A-AAG-G-T--AA-A
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            145093 60 +    252755 A----TACC----A--C------TA-GT----TACTC---TTTA-TT--T----TCAGG----AG----A-A------GA--A-A----A---A--T-Gtc------------------------ta-atat--gaat----a-aa--a-t--aa-a
i Manis_javanica.JSZB01003966.1                         I 17 C 0
s Manis_pentadactyla.KN017078.1                             35169 60 +     58827 A----TACC----A--C------TA-GT----TACTC---TTTA-TT--T----TCAGG----AG----A-A------GA--A-A----A---A--T-Gtc------------------------ta-atat--gaat----a-aa--a-t--aa-a
i Manis_pentadactyla.KN017078.1                         I 18 C 0
s Marmota_marmota.CZRN01000005.1                         36873171 67 +  64221397 ACGTACATC----GC-T------TG-GT----TATTA---TCTA-TT--T----CCAGGA--CAG----A-A-------A--A-A----G---A--T-GTC------------------------tg-atat--gaat----a-aag-a-a--aa-a
i Marmota_marmota.CZRN01000005.1                        I 17 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       63848 62 -    234502 G----CATG----A--T------TG-GT----TACTT---T-TA-TT--T----ACAGAA--GAG----A-AA------A--A-A----G---A--T-GCC------------------------TA-ATAT--GAAT----A-AA--G-G-TAA-A
i Megaderma_lyra.MegLyr_scaffold_3562                   I 18 C 0
s Mellivora_capensis.MelCap_flattened_line_15433              408 65 -     87323 A----CAAC----A--C------CAGGT----TGTTC---TCTG-TT--T----TCAGAA--GAT---TA-AA------A--A-A----G---A--G-GTC------------------------TG-TTAT--GAAT----A-AA-GG-T--AA-A
i Mellivora_capensis.MelCap_flattened_line_15433        I 19 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               12198 61 +     15977 A----TTTC----T--A------AG-GT----TAATC---CTTA-TT-TT-----CATC----AGA---A-A-------A--C-A----A---G--T-TTC------------------------TA-ACAT--GAAT----G-AGG-A-A--AA-A
i Meriones_unguiculatus.MerUng_scaffold_52233           I 17 C 0
s Mesocricetus_auratus.KB708139.1                         1046420 24 -  26018355 ---------------------------------------------------------------------------------------------A--T-GTC------------------------TA-CCAT--GAAT----A-ATG-g-a--aa-a
i Mesocricetus_auratus.KB708139.1                       I 48 C 0
s Microcebus_murinus.CM007691.1                          16509715 62 +  47401472 A----CATC----A--A------TC-AC----TAATC---TTTA-TC--C----TTAGGA--GAG----G-A-------A--A-A----G---A--T-GTC------------------------TG-ATAT--GAAT----A-AAG-A-T--AA-A
i Microcebus_murinus.CM007691.1                         I 12 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  31065 34 -     48017 A----CATC----A--C------TG-GT----TATTC---TTTG-TT--C----TCAGGA--AAC----A-A-------------------------------------------------------------------------------------
i Microgale_talazaci.MicTal_scaffold_34660              I 5 I 27
s Micronycteris_hirsuta.MicHir_scaffold_37978               22139 65 -     32043 G----CAGT----G--T------GC-GT----TAGTC---TTTA-TT--T----TCAGAA--GGA----A-AAAA----A--A-A----G---A--T-GTC------------------------TA-ATAT--GAAT----A-GA--G-C-TAA-A
i Micronycteris_hirsuta.MicHir_scaffold_37978           I 18 C 0
s Microtus_ochrogaster.CM001673.1                        22819571 30 -  98408828 ------------------------------------------------------------------------------------aaaaag---a--t-gtc------------------------ta-gCAT--GAAT----A-AAG-G-A--AT-A
i Microtus_ochrogaster.CM001673.1                       I 48 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8209136 32 +  10048721 A----CATT----A--C------TG-GT----TAGTc---t-ta-tt--t----tcagaa--gaa----a---------------------------------------------------------------------------------------
i Miniopterus_natalensis.LDJU01000022.1                 I 18 I 29
s Miniopterus_schreibersii.MinSch_scaffold_24116            33788 62 +     45743 a----catt----a--c------tg-GT----TAGTC---T-TA-TT--T----TCAGAA--GAA----A-AA------A--A-A----G---A--T-GCA------------------------TA-AGAT--GAAT----A-AA--A-G-TAA-A
i Miniopterus_schreibersii.MinSch_scaffold_24116        I 18 C 0
s Miopithecus_ogouensis.k141_2935907                         1536 61 +     29742 A----TA-C----A--C------TG-GC----TAGTC---TTTA-TT--T----TCAGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-GTAT--GAAT----A-AAG-G-T--AA-A
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        10951 30 -    104932 -----------------------------------------------------------------------AA------A--A-A----G---A--G-GTC------------------------TG-TTAT--GAAT----A-AA-GG-T--AA-A
i Mirounga_angustirostris.MirAng_flattened_line_8852    I 49 C 0
s Mirza_zaza.k141_226143                                     5108 55 +      8497 -----------------------TC-AC----TAATC---TTTA-TT--A----TTAGGA--GAG----G-A-------A--A-A----G---A--T-GTC------------------------TG-ATAT--GAAT----A-AAG-A-T--AA-A
i Mirza_zaza.k141_226143                                I 15 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 145844 36 +    154973 a----cacc----a--c------tg-AT----TGCTC---TTCA-TT--T----TCAGAA--GAA----A-A-------A--A--------------------------------------------------------------------------
i Monodon_monoceros.MonMon_M_scaffold_5598              I 18 I 26
s Mormoops_blainvillei.MorMeg_scaffold_2952                160651 65 +    265003 G----CAGT----A--C------TG-CT----TAGTC---TTTA-TT--T----TCAAAA--GAA----A-AAAA----A--A-A----G---A--T-GTA------------------------TC-ATAT--GAAT----A-GA--G-G-TAA-A
i Mormoops_blainvillei.MorMeg_scaffold_2952             I 18 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                   446 33 -     19904 A----CAC-----A--C------TA-AT----TGCTC---TTTA-TT--T----CCAGGA--GAG----A-A-------------------------------------------------------------------------------------
i Moschus_moschiferus.MosMos_scaffold_78805             I 18 I 28
s Mungos_mungo.MunMun_flattened_line_8729                  144346 36 -    168139 A----TAAC----A--C------CAGGT----TACT-------G-TT--T----CCACAA--GAG----A-AA------A--ACA------------------------------------------------------------------------
i Mungos_mungo.MunMun_flattened_line_8729               I 18 I 23
s Murina_feae.MurFea_scaffold_2254                          19011 25 -    100666 -----------------------------------------TTA-TT--T----TCAGAA--GAA----A-AAAA----A--A-A----G---A---------------------------------------------------------------
i Murina_feae.MurFea_scaffold_2254                      I 21 I 23
s Mus_caroli.LT608236.1                                  70766048 40 +  92629107 A----TTTC----T--A------AA-GT----AAATC---CTTa-ttt-t-----catc----ag----a-a-------a--a-a----aaaaa---------------------------------------------------------------
i Mus_caroli.LT608236.1                                 I 17 I 22
s Mus_musculus.chr16                                     75489110 38 +  98207768 A----TTTC----T--A------AG-GT----AAATC---CTTA-ttttt-----tatc----ag----a-a-------a--a-a----a---a---------------------------------------------------------------
i Mus_musculus.chr16                                    I 17 I 21
s Mus_pahari.LT608305.1                                  67555333 44 +  89017189 A----TTTC----T--AATTAATAG-GT----AAATC---CTTA-TTTTT-----CATC----AG----A-A-------A--A-A----A---A---------------------------------------------------------------
i Mus_pahari.LT608305.1                                 I 17 I 22
s Mus_spretus.CM004110.1                                 74330288 38 +  97876770 A----TTTC----T--A------AG-GT----AAATC---CTTa-ttttt-----tatc----ag----a-a-------a--a-a----a---a---------------------------------------------------------------
i Mus_spretus.CM004110.1                                I 17 I 21
s Muscardinus_avellanarius.MusAve_scaffold_9643             11114 62 +     98495 A----TATC----A--T------TG-GT----AAATA---TTAA-TT--T----CCAGGA--TAG----A-A-------A--A-A----G---A--T-GTC------------------------TG-ATAT--GAAT----A-AAG-G-A--AA-a
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 17 C 0
s Mustela_putorius.JH417978.1                             4423773 67 -  28371801 A----CAAC----A--C------CAGGT----TGTTC---TCTG-Tt--t----tcagaa--gat---taaa-----aaa--a-a----g---a--g-gtc------------------------tg-TTAT--GAAT----A-AA-GG-T--AA-A
i Mustela_putorius.JH417978.1                           I 19 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     89493 32 -    117718 ------------------------G-TC----TAACA---TTTG-CT--T----TCACAA--AAT----A-C-------A--A-A----C---T--T------------------------------------------------------------
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 14 I 17
s Myotis_brandtii.KE161952.1                               967308 48 +   8389877 -----------------------------------------TTa-tt--t----tcagaa--gaa----g-a----aaaa--a-a----g---a--t-gtc------------------------TA-AGAG--GAAT----A-AA--G-G-TAA-A
i Myotis_brandtii.KE161952.1                            I 25 C 0
s Myotis_davidii.KB114863.1                               5018984 47 +   6462685 -----------------------------------------TTa-tt--t----tcagaa--gaa----g-a-----aaa--a-a----g---a--t-gtc------------------------TA-AGAG--GAAT----A-AA--g-gt-aa-a
i Myotis_davidii.KB114863.1                             I 25 C 0
s Myotis_lucifugus.GL429887.1                             3464888 49 -   3747815 -----------------------------------------Tta-tt--t----tcagaa--gaa----g-a---aaaaa--a-a----g---a--t-gtc------------------------tA-AGAG--GAAT----A-AA--G-G-TAA-A
i Myotis_lucifugus.GL429887.1                           I 25 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        10103 48 +     66751 -----------------------------------------TTA-TT--T----TCAGAA--GAA----G-AAAA----A--A-A----A---A--T-GTC------------------------TA-AGAG--GAAT----A-AA--G-G-TAA-A
i Myotis_myotis.MyoMyo_scaffold_6123                    I 25 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             4495 63 -      8794 a----taac----a--c------tA-GT----TGCTC---TTTA-TT--T----TTGCAG--GTG----A-AA------A--A-A----T---A--T-GCC------------------------TA-GTGT--TAAT----A-AAG-G-T--AA-A
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        I 17 C 0
s Nannospalax_galili.KL201303.1                            117909 42 +    362372 A----TTTC----A--T------TG-GA----TAATC---TTTA-TT--T----TCATAA--GAG----A-A-------A--A-A----T---A--t-gt---------------------------------------------------------
i Nannospalax_galili.KL201303.1                         I 17 I 13
s Nasalis_larvatus.k141_153429                               8037 61 +     48152 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-A
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4484343 30 -  14209539 -----------------------------------------------------------------------a------aa--a-a----g---a--g-gtc------------------------TG-TTAT--GAAT----A-AA-GG-T--AA-A
i Neomonachus_schauinslandi.NINY01007774.1              I 49 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3950459 36 -   4490290 a----cacc----a--c------tg-AT----TGCTC---ttca-tt--t----tcagaa--gaa----a-a-------a--a--------------------------------------------------------------------------
i Neophocaena_asiaeorientalis.KZ688543.1                I 18 I 26
s Noctilio_leporinus.NocLep_scaffold_12062                  48752 64 +     94413 A----TAGT----A--T------TG-AT----TAGTC---TTCA-GT--T----TTAGAA--GAA----A-AAA-----A--G-A----G---A--T-GTC------------------------TA-ATAT--GAAT----A-AA--A-G-TAA-A
i Noctilio_leporinus.NocLep_scaffold_12062              I 18 C 0
s Nomascus_annamensis.k141_1439838                           2395 62 +      3718 A----CACC----A--C------TG-GT----TAATC---TATA-TT--T----TCAGGA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-ATAC--GAAT----A-AAG-G-T--AA-A
i Nomascus_annamensis.k141_1439838                      I 246 I 104
s Nomascus_concolor.k141_226614                               755 62 -      5092 A----CACC----A--C------TG-GT----TAATC---TATA-TT--T----TCAGGA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-ATAC--GAAT----A-AAG-G-T--AA-A
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_642452                            1538 62 +      2851 A----CACC----A--C------TA-GT----TAATC---TCTA-TT--T----TCAGGA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-ATAC--GAAT----A-AAG-G-T--AA-A
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             24473 62 -  18771707 A----CACC----A--C------TG-GT----TAATC---TCTA-TT--T----TCAGGA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-ATAC--GAAT----A-AAG-G-T--AA-A
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  2176 62 +      4512 A----CACC----A--C------TG-GT----TAATC---TCTA-TT--T----TCAGGA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-ATAC--GAAT----A-AAG-G-T--AA-A
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                30354 64 +   3668941 A----CACC----A--C------CAGGC----TACTC---TTca-tt--t----gcagaa--gag----a-a------aa--a-a----g---a--g-gtc------------------------ta-ttat--gaat----a-aa-gg-t--aA-A
i Nyctereutes_procyonoides.CAJHUB010000786.1            I 18 C 0
s Nycticebus_bengalensis.LG16                            65566502 48 -  95554990 A----CATC----A--C------TG-GT----TAATC---TTTA-TT--T----TCATGA--GAG----G-A-------A--A-A----G---A--T-GTC------------------------TG-ATA--------------------------
i Nycticebus_bengalensis.LG16                           I 13 I 8
s Nycticebus_coucang.k141_2051882                            3231 48 +      6470 A----CATC----A--C------TG-GT----TAATC---TTTA-TT--T----TCATGA--GAG----G-A-------A--A-A----G---A--T-GTC------------------------TG-ATA--------------------------
i Nycticebus_coucang.k141_2051882                       I 13 I 8
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65668840 48 +  89412551 A----CATC----A--C------TG-GT----TAATC---TTTA-TT--T----TCATGA--GAG----G-A-------A--A-A----G---A--T-GTC------------------------TG-ATA--------------------------
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     I 13 I 8
s Ochotona_princeps.JH802095.1                            4995522 47 -  23139505 -----------------------------------CC---Ttca-tt--t----tcagaa--gga----a-a-------a--c-a----g---a--t-ATC------------------------TG-ACA---AAAT----A-AAG-G-T--AA-A
i Ochotona_princeps.JH802095.1                          I 12 C 0
s Octodon_degus.JH651621.1                                3685035 54 +  10294119 ------------------------G-TC----TAACC---TTTA-TT--T----TCATAA--AGT----A-C-------A--A-A----C---T--T-ATT------------------------TG-atac--aaat----a-caa-g-a--aa-a
i Octodon_degus.JH651621.1                              I 14 I 1
s Ondatra_zibethicus.OndZib_scaffold_6821                  124824 30 +    145789 ------------------------------------------------------------------------------------GAAAAG---A--T-GTC------------------------TA-AGAT--GAAT----A-AGG-G-A--AT-A
i Ondatra_zibethicus.OndZib_scaffold_6821               I 47 C 0
s Odobenus_rosmarus.KB229369.1                             678976 32 -   3126709 A----CAAC----A--C------CAGGT----TACTC---ttca-tt--t----tcagaa--ga---------------------------------------------------------------------------------------------
i Odobenus_rosmarus.KB229369.1                          I 30 I 39
s Odocoileus_virginianus.KZ101650.1                       1079134 34 +   1425656 A----CACC----A--C------TG-AT----TACTC---TTTA-TT--T----CCAGAA--GAG----A-A-------------------------------------------------------------------------------------
i Odocoileus_virginianus.KZ101650.1                     I 18 I 28
s Okapia_johnstoni.LVCL01S0017931.1                         36428 34 +     78940 a----cacc----a--c------tg-AT----TGCTC---TTTA-TA--T----CCTGAA--GAG----A-A-------------------------------------------------------------------------------------
i Okapia_johnstoni.LVCL01S0017931.1                     I 18 I 28
s Onychomys_torridus.OnyTor_scaffold_12578                  36595 63 +     62360 A----TTTT----T--A------AA-GT----TAATC---CTTA-TT--T-----CATA----AA----A-A-------A--A-A--AAA---ACAT-GTC------------------------TA-ACAT--GAAT----A-AGG-G-G--AA-A
i Onychomys_torridus.OnyTor_scaffold_12578              I 17 C 0
s Orcinus_orca.KB316965.1                                 7224141 36 -   7562323 a----cacc----a--c------tg-AT----TGCTc---ttca-tt--t----tcagaa--gaa----a-a-------a--a--------------------------------------------------------------------------
i Orcinus_orca.KB316965.1                               I 18 I 26
s Orycteropus_afer.OryAfe_flattened_line_13509              43412 34 -     66828 A----TACC----A--C------TG-AT----TGTTC---TTTA-TT--T----TCAGGG--AAG----A-A-------------------------------------------------------------------------------------
i Orycteropus_afer.OryAfe_flattened_line_13509          I 5 I 27
s Oryctolagus_cuniculus.CM000803.1                      141875776 63 + 163896628 A----CATA----A--T------TG-GT----TAATC---T-TA-TT--T----TCAGGA--GAA----A-A-------AGAT-A----G---A--T-GTC------------------------TT-ATGT--GAAC----A-Aag-g-t--aa-a
i Oryctolagus_cuniculus.CM000803.1                      I 13 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      307635 68 -    505867 A----CACC----A--C------CAGGCTACTTACTC---TTca-tt--t----gcagaa--gag----a-a------aa--a-a----g---t--g-gtc------------------------ta-ttat--gaat----a-aa-gg-t--aA-A
i Otocyon_megalotis.JAEUCK010005121.1                   I 18 C 0
s Otolemur_crassicaudatus.k141_321880                       38400 62 +     38679 A----CATC----A--C------TG-GT----TAATC---TTTA-TT--T----TCATGG--GAG----G-A-------A--A-A----G---A--T-GTC------------------------TG-ATAT--GAAT----A-AAC-G-T--AA-A
i Otolemur_crassicaudatus.k141_321880                   I 13 C 0
s Otolemur_garnettii.GL873528.1                          18007827 62 -  38779656 A----CATC----A--C------TG-GT----TAATC---TTTA-TT--T----TCATGG--GAG----G-A-------A--A-A----G---A--T-GTC------------------------TG-ATAT--GAAT----A-AAC-G-T--AA-A
i Otolemur_garnettii.GL873528.1                         I 13 C 0
s Ovis_aries.CM001582.2                                 134076694 34 - 275406953 a----cacc----a--c------tg-at----tgctt---ttta-tt--t----ccagaa--GAG----A-A-------------------------------------------------------------------------------------
i Ovis_aries.CM001582.2                                 I 18 I 27
s Ovis_canadensis.OviCan_scaffold_6251                      77908 34 +    140051 A----CACC----A--C------TG-AT----TGCTC---TTTA-TT--T----CCAGAA--GAG----A-A-------------------------------------------------------------------------------------
i Ovis_canadensis.OviCan_scaffold_6251                  I 18 I 27
s Pan_paniscus.AJFE02121023.1                                 345 62 -      1112 A----CACC----A--C------TG-CT----TAATC---TTTA-TT--T----TCAGGA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-A
i Pan_paniscus.AJFE02121023.1                           n 62 n 62
s Pan_troglodytes.NBAG03003562.1                            12512 62 +     18198 A----CACC----A--C------TG-CT----TAATC---TTTA-TT--T----TCAGGA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-A
i Pan_troglodytes.NBAG03003562.1                        I 57 I 42
s Panthera_onca.PanOnc_flattened_line_1615                  33776 28 +    295523 ---------------------------T----TACTC---TTTG-TT--T----TCACAA--GAG----A-AA------A--A-A------------------------------------------------------------------------
i Panthera_onca.PanOnc_flattened_line_1615              I 22 I 23
s Panthera_pardus.KV860323.1                              3637512 28 +  18214204 ---------------------------T----TACTC---TTTG-Tt--t----tcacaa--gag----a-a------aa--a-a------------------------------------------------------------------------
i Panthera_pardus.KV860323.1                            I 22 I 23
s Panthera_tigris.KE721879.1                              5027185 28 -   6340057 ---------------------------T----TACTC---TTTG-TT--T----TCACAA--GAG----A-AA------A--A-A------------------------------------------------------------------------
i Panthera_tigris.KE721879.1                            I 22 I 23
s Pantholops_hodgsonii.KE114631.1                         1065554 34 -   1292953 A----CACC----A--C------TG-AT----TGCTC---TTTA-TT--T----CCAGAA--GAG----A-A-------------------------------------------------------------------------------------
i Pantholops_hodgsonii.KE114631.1                       I 18 I 27
s Papio_anubis.CM001492.2                               188155774 61 - 188283584 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-GTAT--GAAT----A-AAG-G-T--AA-A
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             4091 60 +      5367 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAG-A--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-GTAT--GAAT----A-AAG-G-T--AA-A
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47513161 61 +  47705337 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-GTAT--GAAT----A-AAG-G-T--AA-A
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 67139 60 -    104429 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAG-A--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-GTAT--GAAT----A-AAG-G-T--AA-A
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    5671 61 +     14967 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-GTAT--GAAT----A-AAG-G-T--AA-A
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 1532 60 -      7628 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAG-A--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-GTAT--GAAT----A-AAG-G-T--AA-A
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    115220 39 -    135482 A----TAAC----A--C------CAGGT----TACTC---TTTG-TT--T----TCACAA--GAG----A-A------TA--A-A------------------------------------------------------------------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 I 18 I 22
s Perodicticus_ibeanus.k141_117958                           4815 62 -     23713 A----CATC----A--C------TG-GT----TAATC---TTTA-TT--T----TCATGA--GAG----G-A-------A--A-A----G---A--T-GTC------------------------TG-ATAT--GAAT----A-AAG-G-T--AA-A
i Perodicticus_ibeanus.k141_117958                      I 13 C 0
s Perodicticus_potto.k141_713187                            24124 62 -     27972 A----CATC----A--C------TG-GT----TAATC---TTTA-TT--T----TCATAA--GAG----G-A-------A--A-A----G---A--T-GTC------------------------TG-ATAT--GAAT----A-AAG-G-T--AA-A
i Perodicticus_potto.k141_713187                        I 13 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      43086 81 -     45160 A----ATTC----C--C------TG-AT----TTAAA---TTAA-TT--T----CCAGGA--AAG----A-C-------A--T-G----T---A--T-ATGTACACATATTATTTATACATATATAT-GTGT--GAAA----ATAT-----------
i Perognathus_longimembris.PerPac_flattened_line_22291  I 17 I 3
s Peromyscus_maniculatus.KI615518.1                       4949831 38 -   8017169 a----tttt----a--a------aa-at----taatc---cttA-TT--T-----CATC----AA----A-A-------A--A-A--AGA---A---------------------------------------------------------------
i Peromyscus_maniculatus.KI615518.1                     I 17 I 22
s Petromus_typicus.PetTyp_scaffold_33007                    11968 38 -     36578 -------ACC-TCA--T------TG-AT----TAATT---TTTA-TT--T----TCATAA--AAT----A-A-------C--A-A----G-------------------------------------------------------------------
i Petromus_typicus.PetTyp_scaffold_33007                I 16 I 22
s Phocoena_phocoena.PhoPho_flattened_line_11948            120748 36 -    122454 a----cacc----a--c------tg-AT----TGCTC---TTCA-TT--T----TCAGAA--GAA----A-A-------A--A--------------------------------------------------------------------------
i Phocoena_phocoena.PhoPho_flattened_line_11948         I 18 I 26
s Piliocolobus_badius.k141_1987485                           1556 61 -      5908 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-A
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       2180 61 -     17985 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-A
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            1547 61 +      7694 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-A
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26740025 61 +  26888534 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-A
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            96934 53 +    112873 -----------------------------------------TTA-TT--TTTTTTCAGGGGGGAA----A-AAA-----A--A-A----G---A--T-GTC------------------------TA-AGAG--GAAT----A-AA--G-G-TAA-A
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        I 25 C 0
s Pithecia_albicans.k141_991845                             43158 62 -     61926 A----CACC----A--C------TG-GT----TGATC---TTTA-TT--T----TCACAA--GAG----A-A-------C--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-T
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        24589 62 +     78826 A----CACC----A--C------TG-GT----TGATC---TTTA-TT--T----TCACAA--GAG----A-A-------C--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-T
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              8538 62 -     15800 A----CACC----A--C------TG-GT----TGATC---TTTA-TT--T----TCACAA--GAG----A-A-------C--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-T
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        11736 62 -     16101 A----CACC----A--C------TG-GT----TGATC---TTTA-TT--T----TCACAA--GAG----A-A-------C--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-T
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          5045 62 +      9673 A----CACC----A--C------TG-GT----TGATC---TTTA-TT--T----TCACAA--GAA----A-A-------C--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-T
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13474041 62 -  19735023 A----CACC----A--C------TG-GT----TGATC---TTTA-TT--T----TCACAA--GAG----A-A-------C--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-T
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           12947 62 -     31692 A----CACC----A--C------TG-GT----TGATC---TTTA-TT--T----TCACAA--GAG----A-A-------C--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-T
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           4828 36 +     21690 a----cacc----g--c------tg-AT----TGCTT---TTCA-TT--T----TCAGAA--GAG----A-A-------A--A--------------------------------------------------------------------------
i Platanista_gangetica.PlaMin_flattened_line_72990      I 18 I 26
s Plecturocebus_bernhardi.k141_959214                       22380 62 +     44506 A----CACC----A--C------TG-GT----TGATC---CCTA-TT--T----TCACAA--GAG----A-A-------C--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-T
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        22592 62 +     67491 A----CACC----A--C------TG-GT----TGATC---CCTA-TT--T----TCACAA--GAG----A-A-------C--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-T
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      12831 62 -     98129 A----CACC----A--C------TG-GT----TGATC---CCTA-TT--T----TCACAA--GAG----A-A-------C--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-T
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     22431 62 +    147771 A----CACC----A--C------TG-GT----TGATC---CCTA-TT--T----TCACAA--GAG----A-A-------C--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-T
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        22686 62 -     23762 A----CACC----A--C------TG-GT----TGATC---CCTA-TT--T----TCACAA--GAG----A-A-------C--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-T
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          3152 62 -     55515 A----CACC----A--C------TG-GT----TGATC---CCTA-TT--T----TCACAA--GAG----A-A-------C--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-T
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         22505 62 +    152463 A----CACC----A--C------TG-GT----TGATC---CCTA-TT--T----TCACAA--GAG----A-A-------C--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-T
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                        222 62 -    119457 A----CACC----A--C------TG-GT----TGATC---CCTA-TT--T----TCACAA--GAG----A-A-------C--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-T
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         12227 62 +    134592 A----CACC----A--C------TG-GT----TGATC---CCTA-TT--T----TCACAA--GAG----A-A-------C--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-T
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          22815 62 -     75465 A----CACC----A--C------TG-GT----TGATC---CCTA-TT--T----TCACAA--GAG----A-A-------C--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-T
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              186706 63 -    373494 A--T-TACC----A--C------TG-GT----TAATC---TTTA-TT--T----TCAGGA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-A
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19807354 63 +  19899266 A--T-TACC----A--C------TG-GT----TAATC---TTTA-TT--T----TCAGGA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-A
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               5282 61 -     15069 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-G
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              5416 61 +     14865 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-G
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                76770 33 +     78963 a----cagc----G--C------TG-GT----TGGTC---TTTA-TT--T----CCAGGG--AAG----A---------------------------------------------------------------------------------------
i Procavia_capensis.ProCapCap_scaffold_15315            I 5 I 27
s Prolemur_simus.MPIZ01000048.1                           6848076 62 +  12164890 A----CATC----A--C------TA-GT----TAATC---TTTA-TT--C----TCAGGA--GAG----G-A-------A--A-A----T---A--T-GTC------------------------TG-ATAT--GAAT----A-AAG-A-T--Aa-a
i Prolemur_simus.MPIZ01000048.1                         I 12 C 0
s Propithecus_coronatus.k141_1353159                         3139 62 +     11805 A----CATC----A--C------TA-GT----TAATC---TTTA-TT--C----TCAGGA--GAG----G-A-------A--A-A----T---A--T-GTC------------------------TC-ACAT--GAAT----A-AAG-G-T--AA-A
i Propithecus_coronatus.k141_1353159                    I 12 C 0
s Propithecus_diadema.k141_577245                           42475 62 +     52369 A----CATC----A--C------TA-GT----TAATC---TTTA-TT--C----TCAGGA--GAG----G-A-------A--A-A----G---A--T-GTC------------------------TC-ATAT--GAAT----A-AAG-A-T--AA-A
i Propithecus_diadema.k141_577245                       I 12 C 0
s Propithecus_edwardsi.k141_1317105                         34863 62 -     44753 A----CATC----A--C------TA-GT----TAATC---TTTA-TT--C----TCAGGA--GAG----G-A-------A--A-A----G---A--T-GTC------------------------TC-ATAT--GAAT----A-AAG-A-T--AA-A
i Propithecus_edwardsi.k141_1317105                     I 12 C 0
s Propithecus_perrieri.k141_7554                            16785 62 +     27322 A----CATC----A--C------TA-GT----TAATC---TTTA-TT--C----TCAGGA--GAG----G-A-------A--A-A----G---A--T-GTC------------------------TC-ATAT--GAAT----A-AAG-A-T--AA-A
i Propithecus_perrieri.k141_7554                        I 12 C 0
s Propithecus_tattersalli.k141_907138                       16420 62 -     53241 A----CATC----A--C------TA-GT----TAATC---TTTA-TT--C----TCAGGA--GAG----G-A-------A--A-A----G---A--T-GTC------------------------TC-ATAT--GAAT----A-AAG-A-T--AA-A
i Propithecus_tattersalli.k141_907138                   I 12 C 0
s Propithecus_verreauxi.k141_158021                         38692 62 -     48185 A----CATC----A--C------TA-GT----TAATC---TTTA-TT--C----TCAGGA--GAG----G-A-------A--A-A----T---A--T-GTC------------------------TC-ACAT--GAAT----A-AAG-G-T--AA-A
i Propithecus_verreauxi.k141_158021                     I 12 C 0
s Psammomys_obesus.NESX01026517.1                           33750 61 +     77221 A----TTTC----T--A------AG-GT----TAATC---CTTA-TT-TT-----CATC----AGA---A-A-------A--C-A----A---G--T-TTC------------------------TA-ACAT--GAAT----G-AGG-a-a--aa-a
i Psammomys_obesus.NESX01026517.1                       I 17 C 0
s Pteronotus_parnellii.KE867983.1                            3308 66 -     27784 T----CGGT----A--C------TG-GT----TAgtc---ttta-tt--t----tcagaa--gaa----a-a----aaaa-ta-a----g---a--t-gtc------------------------tA-ATAT--GAAT----A-AA--G-G-TAA-A
i Pteronotus_parnellii.KE867983.1                       I 18 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        246082 66 -    344369 A----CAAC----A--C------CAGGT----TGTTC---TCTG-TT--T----TCAGAA--GAT---TAAAA------A--A-A----G---A--G-GTC------------------------TG-TTAT--GAAT----A-AA-GG-T--AA-A
i Pteronura_brasiliensis.PteBra_flattened_line_1343     I 19 C 0
s Pteropus_alecto.KB031157.1                             13245413 64 -  17261082 a----cact----a--c------tg-GT----CAATC---Tata-tt--t----tcagaa--gag----a-a-----aaa--a-a----g---a--t-gtc------------------------tA-ATAT--GAAT----A-AA--G-G-TAA-A
i Pteropus_alecto.KB031157.1                            I 18 C 0
s Pteropus_vampyrus.KN525959.1                             603369 63 -   3946241 a----cact----a--c------tg-GT----CAATC---Tata-tt--t----tcagaa--gag----a-a------aa--a-a----g---a--t-gtc------------------------TA-ATAT--GAAT----A-AA--G-G-TAA-A
i Pteropus_vampyrus.KN525959.1                          I 18 C 0
s Puma_concolor.QAVW01000427.1                          131533770 28 - 161321710 ---------------------------T----TACTC---TTTG-TT--T----TCACAA--GAC----A-AA------A--A-A------------------------------------------------------------------------
i Puma_concolor.QAVW01000427.1                          I 22 I 23
s Pygathrix_cinerea.k141_374971                             29400 61 +     56732 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-A
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6805891 61 +   6970761 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-A
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             5285 61 +     18040 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-A
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                15211 34 +     68503 A----CACC----A--C------CG-AT----TGCTC---TTTA-TT--T----CCAGAA--GAG----A-A-------------------------------------------------------------------------------------
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 18 I 28
s Rattus_norvegicus.chr11                                13915051 34 +  90463843 A----TTTC----T--A------AG-GT----AAATC---CTTA-TTTTT-----CATC----AT----A-A-------A-----------------------------------------------------------------------------
i Rattus_norvegicus.chr11                               I 17 I 25
s Rhinolophus_sinicus.LVEH01000179.1                      1787281 31 +   2252614 -----------------------------------------------------------------------a-----aaa--a-a----g---a--a-gtc------------------------ta-ATAT--GAAT----A-AA--G-G-TAA-A
i Rhinolophus_sinicus.LVEH01000179.1                    I 49 C 0
s Rhinopithecus_bieti.k119_1391695                           1513 61 -      1866 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-A
i Rhinopithecus_bieti.k119_1391695                      C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206377170 61 - 206558726 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-A
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44856070 61 -  45163003 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-A
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                18737 64 +    109198 a----cact----a--c------AG-GT----CAATC---TGTA-TT--T----TCAGAA--GAG----A-AAA-----A--A-A----G---A--T-GTC------------------------TA-ATCT--GAAT----A-AA--G-G-TAA-A
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            I 18 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       7374 34 +     12214 A----CACC----A--C------AG-AG----TGCTC---TTTA-TT--T----CCAGAA--GAG----A-A-------------------------------------------------------------------------------------
i Saiga_tatarica.SaiTat_scaffold_82192                  I 18 I 27
s Saimiri_boliviensis.NW_024100938.1                     15672246 62 -  43202129 A----CACC----A--G------TG-GG----TAATC---TTTC-TT--t----tcatga--cag----a-g-------c--a-a----g---a--t-gtt------------------------tC-ATAT--GAAT----A-AAG-G-T--AA-A
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        4163 62 +     34089 A----CACC----A--G------TG-GG----TAATC---TTTC-TT--T----TCATGA--GAG----A-G-------C--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-A
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              4104 62 -     60842 A----CACC----A--G------TG-GG----TAATC---TTTC-TT--T----TCATGA--GAG----A-G-------C--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-A
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              4199 62 +     67014 A----CACC----A--G------TG-GG----TAATC---TTTC-TT--T----TCATGA--GAG----A-G-------C--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-A
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              4177 62 +     60816 A----CACC----A--G------TG-GG----TAATC---TTTC-TT--T----TCATGA--GAG----A-G-------C--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-A
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 4114 62 -     76454 A----CACC----A--G------TG-GG----TAATC---TTTC-TT--T----TCATGA--GAG----A-G-------C--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-A
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17340839 62 -  30362882 A----CACC----A--C------TG-GT----TAATC---TTCC-TT--T----TCATGA--GAG----A-A-------C--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAT-G-T--AA-A
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         20198 62 -     62485 A----CACC----A--C------TG-GT----TAATC---TTCC-TT--T----TCATGA--GAG----A-A-------C--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAT-G-T--AA-A
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   31730 65 -    114521 A----CACC----ACAC------TG-AT----TACTA---TTTA-TT--T----TCAGAA--GAG----A-AA------T--A-A----G---A--T-GTC------------------------AA-ATAT--GAAT----A-AA--A-G-TGA-A
i Scalopus_aquaticus.ScaAqu_scaffold_9300               I 22 C 0
s Semnopithecus_entellus.k141_1572367                        2897 61 +     15331 A----TA-C----G--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-A
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       8294 61 +     20762 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-A
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         118296 61 +    130994 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-A
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           37083 61 +     46263 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-A
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     30197 61 +     42640 A----TA-C----G--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-A
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        13241 61 +     30600 A----TA-C----G--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-A
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   99789 35 -    120886 A----TTTT----T--A------AA-GT----TAATC-T-CTTA-TT--T-----CATT----AA----A-A-------A--G-T------------------------------------------------------------------------
i Sigmodon_hispidus.SigHis_scaffold_11332               I 17 I 22
s Solenodon_paradoxus.SolPar_flattened_line_1012            18313 62 +    739146 A----TAAT----T--C------CA-GT----TATTC---TTCA-TA--T----TCAGAA--GAG----A-CA------A--A-A----G---A--T-GTC------------------------TA-TCAT--GAAT----A-TT--A-G--AA-A
i Solenodon_paradoxus.SolPar_flattened_line_1012        I 17 C 0
s Spermophilus_dauricus.KZ294190.1                        2239251 63 +   2842873 a----catc----a-ct------TG-GA----TATTA---TCTA-TT--T----CCAGGA--CAG----A-A-------A--A-A----G---A--T-GTC------------------------Tg-atct--gaat----a-aag-a-a--aa-a
i Spermophilus_dauricus.KZ294190.1                      I 17 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             234203 67 -    276980 G----TAAC----A--C------CATGT----TGCTC---TTCAGTT--T----TCAGAA--GATA---AAAA------A--A-A----A---A--G-GTC------------------------TG-TTAT--GCAT----A-AA-TG-T--AA-A
i Spilogale_gracilis.SpiGra_flattened_line_905          I 19 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            27028 36 +     62062 A----TAAC----A--C------CAGGT----TACT-------G-TT--T----CCACAA--GAG----A-AA------A--ACA------------------------------------------------------------------------
i Suricata_suricatta.SurSur_flattened_line_20339        I 18 I 23
s Sus_scrofa.CM000824.4                                 189271299 38 + 218635234 A----CACC----A--C------TG-AT----GATTC---TTTA-TG--T----TGAGGA--GAGGGGGA-A-------------------------------------------------------------------------------------
i Sus_scrofa.CM000824.4                                 I 18 I 22
s Symphalangus_syndactylus.tarseq_24                        14455 62 -  13920577 A----CACC----A--C------TG-GT----TAATC---TCTA-TT--T----TCAGGA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-ATAC--GAAT----A-AAG-G-T--AA-A
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_148405               5327 63 -      6063 a----ctct----a--c------AG-GT----TAGTC---TTTA-TT--T----TCAGAA--GAA----A-AA------A--A-G----G---A--T-GTC------------------------TA-AGAT--GAAT----A-AA--G-G-TAA-A
i Tadarida_brasiliensis.TadBra_scaffold_148405          I 232 I 118
s Tamandua_tetradactyla.TamTet_scaffold_26877               14155 62 +     45698 A----TAAC----A--C------TA-GT----TGCTC---TTTA-TT--T----TTGCAG--GTG----A-A-------A--A-A----T---A--T-GCC------------------------TA-GTGT--TAAT----A-AAG-G-T--AA-A
i Tamandua_tetradactyla.TamTet_scaffold_26877           I 17 C 0
s Tapirus_indicus.TapInd_scaffold_176                      806321 61 +   1148477 A----CACC----A--C------TG-AG----TACTC---T--A-TT--C----TTAGAA--GAG----A-AAA-----A--A-A----G---A--T-GTC------------------------TA-ATAT--GAAT----A-AA--G-G--TA-A
i Tapirus_indicus.TapInd_scaffold_176                   I 18 I 1
s Tapirus_terrestris.TapTer_scaffold_14939                  57012 61 +     99546 A----CACT----A--C------TG-AG----TACTC---T--A-TT--C----TTAGAA--GAG----A-AAA-----A--A-A----G---A--T-GTC------------------------TA-ATAT--GAAT----A-AA--G-G--TA-A
i Tapirus_terrestris.TapTer_scaffold_14939              I 18 I 1
s Tarsius_lariang.k141_609102                               25983 62 +     42269 A----CTCC----A--C------TG-AC----TAATC---TTTA-TT--T----TTAGAA--GAG----A-A-------A--A-A----G---A--T-GGC------------------------TG-ATAT--GAAT----A-AAG-G-T--AA-A
i Tarsius_lariang.k141_609102                           I 12 C 0
s Tarsius_wallacei.k141_48636                               59299 62 +     65473 A----CTCC----A--C------TG-AC----TAATC---TTTA-TT--T----TTAGAA--GAG----A-A-------A--A-A----G---A--T-GGC------------------------TG-ATAT--GAAT----A-AAG-G-T--AA-A
i Tarsius_wallacei.k141_48636                           I 12 C 0
s Theropithecus_gelada.CM009951.1                       194007301 61 - 194193292 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-GTAT--GAAT----A-AAG-G-T--AA-A
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             38788 38 -     47444 -------GCC-TCA--T------TG-GT----TAATC---TTTA-TT--T----TCATAA--AGT----A-A-------C--A-A----G-------------------------------------------------------------------
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         I 13 I 23
s Tolypeutes_matacus.TolMat_scaffold_269431                  4991 59 +      6782 a----tacc----a--c------AA-AT----TGCT-------A-TT--T----TCATAC--TAG----A-AA------A--A-A----T---A--T-GCC------------------------TG-CTGT--GAAT----A-AAG-G-T--AA-A
i Tolypeutes_matacus.TolMat_scaffold_269431             I 17 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  135310 65 -    259118 G----GAGG----A--T------GG-GT----TAGTC---TTTA-TT--G----TCAGAA--GAA----G-AAAA----A--A-A----G---A--T-GTC------------------------TA-ATAT--GAAT----A-GA--G-C-TTA-A
i Tonatia_saurophila.TonSau_scaffold_3334               I 18 C 0
s Trachypithecus_auratus.k141_738098                        26401 61 +     38948 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-A-T--AA-A
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   20131 61 -     32910 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-A
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      1518 61 -     12939 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-A-T--AA-A
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       1453 61 -     14244 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-A
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           42851 61 -     54611 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-A
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                         657 61 -     11566 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-A
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     2829 61 -     15592 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-A
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          1486 61 +     14371 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-A
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  51238 61 +     51589 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-A
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       14419 61 +     14732 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-A
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       4891 61 -     28054 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-A
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44659691 61 -  44834318 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-A
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       1994 61 +     13828 A----TA-C----A--C------TG-GC----TAATC---TTTA-TT--T----TCAGCA--GAG----A-A-------A--A-A----G---A--T-GTT------------------------TC-ATAT--GAAT----A-AAG-G-T--AA-A
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   4604 34 +     90398 C----TACC----A--C------TG-AT----TGCTC---TTTA-TT--T----TCACAA--GAG----A-A-------------------------------------------------------------------------------------
i Tragulus_javanicus.TraJav_scaffold_14717              I 18 I 28
s Trichechus_manatus.JH594618.1                          16081952 34 +  31416278 a----CACC----A--C------TG-GT----TGCTC---TTTA-TT--T----TCAGGT--AAG----A-A-------------------------------------------------------------------------------------
i Trichechus_manatus.JH594618.1                         I 5 I 27
s Tupaia_chinensis.KB320831.1                             2792357 62 -   3938065 A----CATT----A--T------TG-GT----TAATC---TTTA-TT--T----Ccagga--gag----a-a-------a--a-a----t---a--c-atc------------------------tg-ATAC--GAAT----A-AAG-G-T--AA-A
i Tupaia_chinensis.KB320831.1                           I 5 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    4562 62 +     13056 A----CATT----A--T------TG-GC----TAATC---TTTA-TT--T----TCAGGA--GAG----A-A-------A--A-A----T---A--T-GTC------------------------TG-ATAT--TAAT----A-AAG-G-T--AA-A
i Tupaia_tana.TupTan_flattened_line_68454               I 5 C 0
s Tursiops_truncatus.MRVK01000923.1                      69312858 36 -  96451834 a----cacc----a--c------tg-AT----TGCTc---ttca-tt--t----tcagaa--gaa----a-a-------a--a--------------------------------------------------------------------------
i Tursiops_truncatus.MRVK01000923.1                     I 18 I 26
s Uropsilus_gracilis.UroGra_scaffold_69449                    743 63 +     10241 A----CACT----A--C------TA-GT----TATTC---TTTC-CA--T----TCAGAA--GAG----A-AA------T--G-A----G---A--T-GTC------------------------TA-ATAT--GAAT----A-AA--A-A-TAA-A
i Uropsilus_gracilis.UroGra_scaffold_69449              I 21 C 0
s Ursus_maritimus.KK498671.1                              6514223 63 +  28682327 A----CAAC----A--C------CAGGA----TACTC---TTCg-tt--t----tcagag--gag----a-a------aa--a-a----g---a--g-gtc------------------------T--TTAT--GAAT----A-AA-GG-T--AA-A
i Ursus_maritimus.KK498671.1                            I 18 C 0
s Varecia_rubra.k141_432109                                  4777 62 -     20643 A----CATC----A--C------TA-GT----TAATC---TTTA-TT--C----TCAGGA--GAG----G-A-------A--A-A----G---A--T-GTC------------------------TG-ATAT--GAAT----A-AAG-A-T--AA-A
i Varecia_rubra.k141_432109                             I 12 C 0
s Varecia_variegata.k141_775891                             24318 62 -     33872 A----CATC----A--C------TA-GT----TAATC---TTTA-TT--C----TCAGGA--GAG----G-A-------A--A-A----G---A--T-GTC------------------------TG-ATAT--GAAT----A-AAG-A-T--AA-A
i Varecia_variegata.k141_775891                         I 12 C 0
s Vicugna_pacos.KN269600.1                                1524138 27 -   2331223 ---------------------------------------------------------------------------------------------a--t-gtc------------------------ta-atat--aaataaagt-ta--a-t--at-a
i Vicugna_pacos.KN269600.1                              I 49 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                137732 64 -    281493 A----CACC----A--C------CAGGC----TACTC---TTCA-TT--T----GCAGAA--GAG----A-AA------A--A-A----G---A--G-GTC------------------------TA-TTAT--GAAT----A-AA-GG-T--AA-A
i Vulpes_lagopus.VulLag_flattened_line_2045             I 18 C 0
s Xerus_inauris.XerIna_scaffold_7898                       126364 62 -    134049 a----catc----a--t------tg-GT----TAATC---TGTA-TT--T----CCAGGA--CAG----A-A-------A--A-A----A---A--T-GTC------------------------TA-ATAT--AAAT----A-AAG-A-A--AA-A
i Xerus_inauris.XerIna_scaffold_7898                    I 17 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        213734 30 -    227762 -----------------------------------------------------------------------AA------A--A-A----G---A--G-GTC------------------------TG-TTAT--GAAT----A-AA-GG-T--AA-A
i Zalophus_californianus.ZalCal_flattened_line_4097     I 62 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     14451 36 -     20485 A----TTTC----A--A------TG-CT----TTATC---TTGA-TT-TT----TCAGAA--GAG----A-A-------A-----------------------------------------------------------------------------
i Zapus_hudsonius.ZapHud_scaffold_64392                 I 17 I 25
s Ziphius_cavirostris.ZipCav_flattened_line_127025           6353 36 -      8775 a----aacc----a--c------tg-AT----TGCTC---TTCA-TT--T----CCAGAA--GAG----A-A-------A--A--------------------------------------------------------------------------
i Ziphius_cavirostris.ZipCav_flattened_line_127025      I 18 I 26
e Sorex_araneus.JH798170.1                               17750754 3364 -  27805282 I
e Erinaceus_europaeus.JH835290.1                         11531598 1064 +  16010500 I
e Elephantulus_edwardii.JH947210.1                        7804622 10712 +  15467074 I
e Hylobates_pileatus_a.tarseq_592                             33341 34 -     60944 I
e Propithecus_coquerelli.NW_012147997.1                    667273 6500 -   2312742 I
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               11367 6 +    209709 T--TA--T--AC
s Acinonyx_jubatus.LLWD01000356.1                         2033483 6 +   3721120 t--ta--t--tt
i Acinonyx_jubatus.LLWD01000356.1                       I 23 I 3
s Acomys_cahirinus.AcoCah_scaffold_1625                    112117 6 -    189883 T--TA--T--AT
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10656797 6 +  23371972 T--TA--T--GT
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 I 3
s Ailurus_fulgens.LNAC01000003.1                          7094142 6 -  16596857 t--ta--t--at
i Ailurus_fulgens.LNAC01000003.1                        C 0 I 2
s Allactaga_bullata.AllBul_scaffold_70162                   16423 6 -     22067 T--AT--T--AT
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                    853 6 -     60446 T--TA--T--AC
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         1574 6 -     29318 T--TA--T--AC
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                          511 6 +     38766 T--TA--T--AC
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          1468 6 -     80423 T--TA--T--AC
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             9765 6 -     18050 T--TA--T--AC
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                 10858 6 -     11521 T--TA--T--AC
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                             10442 6 -     21359 T--TA--T--AC
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                  57 6 +      2129 T--TA--T--AC
i Alouatta_juara.k141_1244470                           N 0 C 0
s Alouatta_macconnelli.k141_1331706                          9741 6 -     10438 T--TA--T--AC
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            6397 6 +      7047 T--TA--T--AC
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             9677 6 +     10410 T--TA--T--AC
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            3485 6 -      4927 T--TA--T--AC
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             6414 6 +      6429 T--TA--T--AC
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3519613 8 +   4113121 t--atata--ct
i Ammotragus_lervia.NIVO01013474.1                      I 27 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      389821 6 -    631301 T--TA--T--AT
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 I 3
s Antilocapra_americana.AntAmePen_scaffold_42841            30196 8 +     33004 T--ATATA--CT
i Antilocapra_americana.AntAmePen_scaffold_42841        I 28 C 0
s Aotus_azarae.k141_3170768                                 62128 6 +     78111 T--TA--T--AC
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            5069 6 +     22701 T--TA--T--AC
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5749026 6 +   9889416 T--TA--T--AC
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             5613 6 -    104377 T--TA--T--AC
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               5615 6 +     23246 T--TA--T--AC
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     3241 6 +      5067 T--CA--T--AC
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_587554                         481 6 +      9265 T--TA--T--AC
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 8232 6 -     29036 T--TA--T--AT
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 I 3
s Ateles_geoffroyi_b.tarseq_2582                             9538874 6 +  39197703 T--TA--T--AC
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             60145 6 +     85812 T--TA--T--AC
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                11157 6 +     89302 T--TA--T--AC
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             15662 6 -     58268 T--TA--T--AC
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             63653 6 +    119057 T--TA--T--AC
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               5622 6 -     25888 T--TA--T--AC
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 6280 5 -     16375 T--TA--T--A-
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              2600 5 +      2719 T--TA--T--A-
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26379640 8 +  51448160 t--atata--ct
i Balaenoptera_acutorostrata.KI537095.1                 I 26 C 0
s Balaenoptera_bonaerensis.DF502048.1                        4871 8 -     13118 t--atata--ct
i Balaenoptera_bonaerensis.DF502048.1                   I 26 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   42676 8 -     72089 T--ATATA--CT
i Beatragus_hunteri.BeaHun_scaffold_21644               I 27 C 0
s Bison_bison.KN264915.1                                  6559351 8 +   6870073 t--atatg--CT
i Bison_bison.KN264915.1                                I 28 C 0
s Bos_indicus.CM003021.1                                138139455 8 - 161108492 t--atata--CT
i Bos_indicus.CM003021.1                                I 28 C 0
s Bos_mutus.JH883513.1                                     571992 8 -    998990 t--atata--ct
i Bos_mutus.JH883513.1                                  I 28 C 0
s Bos_taurus.CM000177.6                                 136295188 8 - 158972876 t--atata--CT
i Bos_taurus.CM000177.6                                 I 28 C 0
s Bubalus_bubalis.KI419065.1                              1232271 8 -   1914593 t--atata--ct
i Bubalus_bubalis.KI419065.1                            I 28 C 0
s Cacajao_ayresi.k141_724503                               113512 6 -    171031 T--TA--T--AC
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 12543 6 +    125063 T--TA--T--AC
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                14588 6 -    216513 T--TA--T--AC
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        7128 6 -    134917 T--TA--T--AC
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3219059 8 -   8989139 tatat--a--ta
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           396763 6 -  15254737 t--at--a--ta
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2972496 8 +   6889770 tatat--a--ta
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11518956 6 +  39901454 C--TA--T--AT
i CanFam4.chr31                                         C 0 I 3
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   13981 6 +     87036 C--TA--T--AT
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 I 3
s Canis_lupus_dingo.QKWQ01001993.1                       11265623 6 -  35597290 C--TA--T--AT
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 I 3
s Canis_lupus_familiaris.chr31                           11088157 6 +  39895921 C--TA--T--AT
i Canis_lupus_familiaris.chr31                          C 0 I 3
s Canis_lupus_orion.HG994411.1                           16455172 6 -  44759192 C--TA--T--AT
i Canis_lupus_orion.HG994411.1                          C 0 I 3
s Capra_aegagrus.CM003214.1                              21324689 8 + 157394656 t--atata--ct
i Capra_aegagrus.CM003214.1                             I 27 C 0
s Capra_hircus.CM004562.1                               135705916 8 - 157403528 t--atata--ct
i Capra_hircus.CM004562.1                               I 27 C 0
s Carlito_syrichta.NW_007248099.1                          308563 6 +    345090 t--ta--t--at
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               59025 6 +     67245 T--TA--T--AT
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 I 3
s Castor_canadensis.CasCan_scaffold_47037                   30243 5 +     33760 G--TG--T--A-
i Castor_canadensis.CasCan_scaffold_47037               I 4 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   158370 6 -    276539 T--AT--A--CA
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_porcellus.DS562889.1                             15798049 5 -  24440124 t---t--t--at
i Cavia_porcellus.DS562889.1                            I 15 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       176240 5 +    436027 T---T--T--AT
i Cavia_tschudii.CavTsc_scaffold_488                    I 15 C 0
s Cebus_albifrons.Contig22                               18890357 6 -  29618158 T--TA--T--AT
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 7901 6 -     26817 T--TA--T--AT
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                12141 6 +     25043 T--TA--T--AT
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         7597 6 +     21754 T--TA--T--AT
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4363370 6 +   7569818 a--ta--t--ac
i Ceratotherium_simum.JH767818.1                        C 0 I 3
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         3125 6 -      9338 A--TA--T--AC
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 I 3
s Cercocebus_atys.KQ010443.1                              6554796 6 +   6739814 T--TA--T--AC
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      26273 6 +     60454 T--TA--T--AC
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          1478 6 -     21101 T--TA--T--AC
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         58788 6 -    107033 T--TA--T--AC
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        1680 6 -     17608 T--TA--T--AC
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          29175 6 +     30494 T--TA--T--AC
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          58021 6 -     59240 T--TA--T--AC
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          1722 6 +     16677 T--TA--T--AC
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           23880 6 +     35983 T--TA--T--AC
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11990408 6 +  12117833 T--TA--T--AC
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46477166 6 +  46592721 T--TA--T--AC
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      40717 6 -     45581 T--TA--T--AC
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       1723 6 +     35577 T--TA--T--AC
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        1499 6 -     25661 T--TA--T--AC
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        1477 6 -     17744 T--TA--T--AC
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        21093 6 +     37128 T--TA--T--AC
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           2304 6 -      6963 T--TA--T--AC
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 I 2
s Cheirogaleus_major.k141_1157592                           58563 6 -     68416 T--TA--C--AT
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            7606 6 +     13308 T--TA--C--AT
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             5158 6 -     18223 T--TA--T--AC
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             22181 6 +     25473 T--TA--G--AC
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           41216 6 +     57117 T--TA--T--AC
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          45895 6 +     54541 T--TA--T--AC
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15961277 6 +  43084221 c--at--t--tt
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         70719 6 +    196370 T--TA--T--AC
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          14899 6 +     40510 T--TA--T--AC
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15138639 6 -  15256731 T--TA--T--AC
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      33686 6 -     53260 T--TA--T--AC
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101144250 6 + 101219884 T--TA--T--AC
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                15983 6 -     21363 T--CA--T--AC
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 I 4
s Choloepus_hoffmanni.KN194586.1                           761290 6 +    964067 T--CA--T--AC
i Choloepus_hoffmanni.KN194586.1                        C 0 I 4
s Colobus_angolensis.KN985967.1                          10886016 6 +  10971483 T--TA--T--AC
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147664180 6 + 156195979 T--TA--T--AC
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            16165 6 +     23629 T--TA--T--AC
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60612982 6 +  78930452 T--TA--t--ag
i Condylura_cristata.JH655880.1                         I 3 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         39190 6 -     40477 T--CA--C--AC
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 I 3
s Cricetomys_gambianus.CriGam_scaffold_949                 278073 6 -    399297 T--TA--C--AT
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53028736 6 +  72327488 t--ga--t--at
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_88140              1515 6 +     11655 T--TT--T--GC
i Crocidura_indochinensis.CroInd_scaffold_88140         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            51504 6 -     70449 T--TA--T--TT
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 23 I 3
s Ctenodactylus_gundi.CteGun_scaffold_447                  207685 6 -    956709 T--TT--T--GT
i Ctenodactylus_gundi.CteGun_scaffold_447               I 23 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 30263 5 -     67205 A--T---T--AT
i Ctenomys_sociabilis.CteSoc_scaffold_19489             I 22 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                17293 6 +     26546 T--TT--T--AT
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             58379 6 -    236241 T--TT--T--AT
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          183178 6 -   6883506 T--TA--A--AC
i Dasypus_novemcinctus.JH568778.1                       C 0 I 2
s Daubentonia_madagascariensis.ctg11                     16844423 6 +  31942871 T--TA--T--AT
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80036318 8 -  96802777 t--atata--ct
i Delphinapterus_leucas.KZ290064.1                      I 26 C 0
s Desmodus_rotundus.KZ672188.1                           18698296 6 -  18957592 T--TA--T--AA
i Desmodus_rotundus.KZ672188.1                          I 24 I 3
s Dicerorhinus_sumatrensis.PEKH010003161.1                 322022 6 +    993696 a--ta--t--ac
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 I 3
s Diceros_bicornis.DicBicMic_scaffold_9545                   2672 6 +    151128 A--TA--T--AC
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 I 3
s Dinomys_branickii.DinBra_scaffold_1996                   156534 6 +    228994 C--TT--T--GA
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3655641 2 +   4240102 -------t--a-
i Dipodomys_ordii.KN672545.1                            I 2 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 27274 2 +     28912 -------T--A-
i Dipodomys_stephensi.DipSte_scaffold_44365             I 2 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                35631 5 -     73477 T---T--T--AC
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22994693 6 -  44670279 t--ta--c--AC
i Echinops_telfairi.JH980316.1                          I 27 I 1
s Eidolon_helvum.KE772537.1                                 11722 6 +     24177 T--TA--T--AC
i Eidolon_helvum.KE772537.1                             C 0 I 4
s Elaphurus_davidianus.JRFZ01086400.1                     1490965 8 +   1727528 T--ATata--ct
i Elaphurus_davidianus.JRFZ01086400.1                   I 28 I 8
s Ellobius_lutescens.LOEQ01003611.1                        239300 6 -    369425 T--TA--t--at
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           6414 6 -      7838 T--GA--C--AT
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85871660 6 +  99434291 T--TA--T--AT
i Enhydra_lutris.KZ291749.1                             C 0 I 3
s Eptesicus_fuscus.JH977687.1                             4703686 6 +   6522550 t--ta--t--at
i Eptesicus_fuscus.JH977687.1                           C 0 I 3
s Equus_asinus.JREZ01000062.1                             5852423 5 -   7175178 a--t---t--ac
i Equus_asinus.JREZ01000062.1                           C 0 I 3
s Equus_caballus.CM000402.2                              13350926 5 +  41866177 a--t---t--ac
i Equus_caballus.CM000402.2                             C 0 I 3
s Equus_przewalskii.ATBW01073585.1                          12416 5 +     92910 a--t---t--ac
i Equus_przewalskii.ATBW01073585.1                      C 0 I 3
s Erythrocebus_patas.Contig8                             48770817 6 -  48907691 T--TA--T--AC
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          314524 8 +    330699 T--ATATA--CT
i Eschrichtius_robustus.EscRob_flattened_line_685       I 26 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             60978 8 +     89355 T--ATATA--CT
i Eubalaena_japonica.EubJap_flattened_line_7756         I 26 C 0
s Eulemur_albifrons.k141_715837                              4614 6 +     13586 T--TA--C--AT
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               4551 6 -      6809 T--TA--C--AT
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            11024 6 +     36558 T--TA--C--AT
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             7343 6 +     60246 T--TA--C--AT
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                10822 6 +    109717 T--TA--C--AT
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               15205 6 +     16540 T--TA--C--AT
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                15478 6 +     27497 T--TA--C--AT
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           17935 6 +     26808 T--TA--C--AT
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                32670 6 +     46535 T--TA--C--AT
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              15392 6 -     29447 T--TA--C--AT
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129892459 6 - 159252932 t--ta--t--tt
i Felis_catus.CM001386.2                                I 23 I 3
s Felis_catus_fca126.CM031420.1                         129279528 6 - 158578461 t--ta--t--tt
i Felis_catus_fca126.CM031420.1                         I 23 I 3
s Felis_nigripes.FelNig_flattened_line_8080                 20673 6 +     52776 T--TA--T--TT
i Felis_nigripes.FelNig_flattened_line_8080             I 23 I 3
s Galago_moholi.ctg555                                     210357 6 -    847004 T--TA--T--AC
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           12736 6 -     43889 T--TA--T--AC
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           9813 6 +     27357 T--TA--T--AC
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               155802 6 +    324696 T--TA--T--AC
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    180762 8 -    189561 t--atata--ct
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 28 C 0
s Glis_glis.GliGli_scaffold_79770                           12607 6 -     18683 T--TA--T--AT
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               4883 6 -     14630 T--TA--T--AC
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119651982 6 - 195582420 T--TA--T--AC
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   77152 6 +    118900 T--TC--T--AT
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         1397 6 +     10286 T--TA--C--AT
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_1254239                            9573 6 +      9690 T--TA--C--AT
i Hapalemur_gilberti.k141_1254239                       C 0 C 0
s Hapalemur_griseus.k141_1387522                             5203 6 +     56096 T--TA--C--AT
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        28453 6 -     42470 T--TA--C--AT
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        45076 6 -     54384 T--TA--C--AT
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              16709 6 +     53719 T--TA--T--TT
i Helogale_parvula.HelPar_flattened_line_22962          I 23 I 3
s Hemitragus_hylocrius.HemHyl_scaffold_16669                26961 8 -     91191 T--ATATA--CT
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 27 C 0
s Heterocephalus_glaber.JH602058.1                        2550610 8 +  31725842 t--tg--tatgt
i Heterocephalus_glaber.JH602058.1                      I 24 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               56966 6 +     73687 T--TA--C--AT
i Heterohyrax_brucei.HetBruBak_scaffold_25354           I 27 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              146612 8 +    277961 T--ATATA--CT
i Hippopotamus_amphibius.HipAmp_scaffold_1308           I 26 C 0
s Hipposideros_armiger.JXIK01001085.1                      277900 6 -    477199 t--ta--t--at
i Hipposideros_armiger.JXIK01001085.1                   C 0 I 3
s Hipposideros_galeritus.HipGal_scaffold_104691              7052 6 -      9143 T--TA--T--AT
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 I 3
s Hoolock_leuconedys.ctg79                                      4289 6 -   7690867 T--TA--T--GC
i Hoolock_leuconedys.ctg79                                 I 69 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 16792 3 -     67322 T--TT-------
i Hyaena_hyaena.HyaHya_flattened_line_20729             I 22 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           18513 5 -    119109 T---G--T--AT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              4715 6 +      5897 T--TA--T--GC
i Hylobates_abbotti.k141_493872                         I 25 C 0
s Hylobates_agilis.k141_624065                               1579 6 +      2112 T--TA--T--GC
i Hylobates_agilis.k141_624065                          I 25 C 0
s Hylobates_klossii.k141_466549                             11155 6 +     11537 T--TA--T--GC
i Hylobates_klossii.k141_466549                         I 25 C 0
s Hylobates_pileatus_b.ContigUN                                 14624260 6 -  25970782 T--TA--T--GC
i Hylobates_pileatus_b.ContigUN                                I 25 C 0
s Hylobates_muelleri.k141_1389047                            1516 6 -      2977 T--TA--T--GC
i Hylobates_muelleri.k141_1389047                       I 25 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     5680 6 +     22540 T--TA--T--AT
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7125396 6 +  13083262 t--ta--t--ac
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_4418183                                   1044 6 -      1457 T--TG--T--AC
i Indri_indri.k141_4418183                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               8518 8 +     17520 T--ATATA--CA
i Inia_geoffrensis.IniGeo_flattened_line_66725          I 26 C 0
s Jaculus_jaculus.JH725517.1                              8565432 6 +  11848649 t--aa--t--gt
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               23134 8 +     37189 T--ATCTA--CT
i Kogia_breviceps.KogBre_flattened_line_35920           I 26 C 0
s Lagothrix_lagothricha.k141_12968                          49742 6 -    147782 T--TA--T--TC
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   113777 6 -    115756 T--TA--T--AT
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 I 3
s Lemur_catta.scaffold_1                                258406757 6 - 285822530 T--TA--C--AT
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        23510 6 +     39228 T--TA--T--AT
i Lepilemur_ankaranensis.k141_884009                    I 4 C 0
s Lepilemur_dorsalis.k141_134267                            52896 6 +     63517 T--TA--T--AT
i Lepilemur_dorsalis.k141_134267                        I 4 C 0
s Lepilemur_ruficaudatus.k141_617879                        78153 6 +    116806 T--TA--T--AT
i Lepilemur_ruficaudatus.k141_617879                    I 4 C 0
s Lepilemur_septentrionalis.k141_578524                     31149 6 -     33031 T--TA--T--AT
i Lepilemur_septentrionalis.k141_578524                 I 4 C 0
s Leptonychotes_weddellii.KB714749.1                      3085468 6 -   3498232 T--TA--T--AT
i Leptonychotes_weddellii.KB714749.1                    C 0 I 4
s Lepus_americanus.LepAme_scaffold_62849                    12797 6 +     22452 T--TA--T--AA
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            135471 8 +   3060487 t--atata--ct
i Lipotes_vexillifer.KE558548.1                         I 26 C 0
s Lophocebus_aterrimus.ctg55                             19247885 6 +  19376315 T--TA--T--AC
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           10124 6 +     84689 T--TA--T--GC
i Loris_lydekkerianus.k141_550999                       I 8 C 0
s Loris_tardigradus.ctg97                                 3777873 6 +   6799190 T--TA--T--GC
i Loris_tardigradus.ctg97                               I 8 C 0
s Loxodonta_africana.GL010040.1                          20591563 6 -  62548349 T--TA--T--AC
i Loxodonta_africana.GL010040.1                         I 27 C 0
s Lycaon_pictus.CM007556.1                               11087613 6 +  39895028 C--TA--T--AT
i Lycaon_pictus.CM007556.1                              C 0 I 3
s Macaca_arctoides.k141_2201161                             19625 6 +     74745 T--TA--T--AC
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12706081 6 +  12821369 T--TA--T--AC
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                1726 6 -      3136 T--TA--T--AC
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           46543 6 +     63263 T--TA--T--AC
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                 1246 6 -      2568 T--TA--T--AC
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 1832 6 -      7381 T--TA--T--AC
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  45050 6 -     79256 T--TA--T--AC
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196035158 6 + 196197964 T--TA--T--AC
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11445326 6 +  11645122 T--TA--T--AC
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   3997 6 -     46448 T--TA--T--AC
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                1669 6 -     13212 T--TA--T--AC
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 15350 6 -     55006 T--TA--T--AC
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43840467 6 +  43892939 T--TA--T--AC
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               16636 6 -     24607 T--TA--T--AC
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               4002 6 -     27140 T--TA--T--AC
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                701095 6 +    802869 T--TA--T--AC
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 I 4
s Mandrillus_leucophaeus.scaffold125                     43437044 6 -  43563597 T--TA--T--AC
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4449870 6 -   4543643 T--TA--T--AC
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            145153 6 +    252755 t--ta--t--at
i Manis_javanica.JSZB01003966.1                         C 0 I 3
s Manis_pentadactyla.KN017078.1                             35229 6 +     58827 t--ga--t--at
i Manis_pentadactyla.KN017078.1                         C 0 I 3
s Marmota_marmota.CZRN01000005.1                         36873238 6 +  64221397 t--ta--t--ac
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       63910 6 -    234502 C--TA--T--AC
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 I 3
s Mellivora_capensis.MelCap_flattened_line_15433              473 6 -     87323 T--TA--T--AT
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 I 3
s Meriones_unguiculatus.MerUng_scaffold_52233               12259 6 +     15977 T--TA--A--AT
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1046444 6 -  26018355 c--aa--c--at
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Microcebus_murinus.CM007691.1                          16509777 6 +  47401472 T--Ta--c--at
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  31126 6 -     48017 C--TA--T--AC
i Microgale_talazaci.MicTal_scaffold_34660              I 27 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               22204 6 -     32043 T--TA--T--GT
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 I 3
s Microtus_ochrogaster.CM001673.1                        22819601 6 -  98408828 T--GA--T--AT
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8209197 6 +  10048721 G--TA--T--AT
i Miniopterus_natalensis.LDJU01000022.1                 I 29 I 3
s Miniopterus_schreibersii.MinSch_scaffold_24116            33850 6 +     45743 G--TA--T--AT
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 I 3
s Miopithecus_ogouensis.k141_2935907                         1597 6 +     29742 T--TG--T--AC
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        10981 6 -    104932 T--TA--T--AT
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 I 3
s Mirza_zaza.k141_226143                                     5163 6 +      8497 T--TA--C--AT
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 145906 8 +    154973 T--ATATA--CT
i Monodon_monoceros.MonMon_M_scaffold_5598              I 26 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                160716 6 +    265003 T--TA--T--AT
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 I 3
s Moschus_moschiferus.MosMos_scaffold_78805                   507 8 -     19904 T--ATATA--CT
i Moschus_moschiferus.MosMos_scaffold_78805             I 28 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  144405 6 -    168139 T--TA--T--TT
i Mungos_mungo.MunMun_flattened_line_8729               I 23 I 3
s Murina_feae.MurFea_scaffold_2254                          19059 6 -    100666 T--TA--T--AT
i Murina_feae.MurFea_scaffold_2254                      I 23 I 3
s Mus_caroli.LT608236.1                                  70766110 6 +  92629107 T--TA--T--GT
i Mus_caroli.LT608236.1                                 I 22 C 0
s Mus_musculus.chr16                                     75489169 6 +  98207768 C--TA--T--GT
i Mus_musculus.chr16                                    I 21 C 0
s Mus_pahari.LT608305.1                                  67555399 6 +  89017189 T--TA--T--GT
i Mus_pahari.LT608305.1                                 I 22 C 0
s Mus_spretus.CM004110.1                                 74330347 6 +  97876770 C--TA--T--AT
i Mus_spretus.CM004110.1                                I 21 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             11176 6 +     98495 t--ta--t--gt
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 I 217
s Mustela_putorius.JH417978.1                             4423840 6 -  28371801 t--ta--t--at
i Mustela_putorius.JH417978.1                           C 0 I 3
s Myocastor_coypus.MyoCoy_scaffold_3653                     89542 5 -    117718 A--A---T--AT
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 17 C 0
s Myotis_brandtii.KE161952.1                               967356 6 +   8389877 T--TG--T--AT
i Myotis_brandtii.KE161952.1                            C 0 I 5
s Myotis_davidii.KB114863.1                               5019031 6 +   6462685 t--ta--t--at
i Myotis_davidii.KB114863.1                             C 0 I 5
s Myotis_lucifugus.GL429887.1                             3464937 6 -   3747815 T--TG--T--AT
i Myotis_lucifugus.GL429887.1                           C 0 I 5
s Myotis_myotis.MyoMyo_scaffold_6123                        10151 6 +     66751 T--TA--T--AT
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 I 5
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             4558 6 -      8794 T--TA--T--AC
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 I 3
s Nasalis_larvatus.k141_153429                               8098 6 +     48152 T--TA--T--AC
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4484373 6 -  14209539 T--TA--T--AT
i Neomonachus_schauinslandi.NINY01007774.1              C 0 I 3
s Neophocaena_asiaeorientalis.KZ688543.1                  3950521 8 -   4490290 t--atata--ct
i Neophocaena_asiaeorientalis.KZ688543.1                I 26 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  48816 6 +     94413 T--TA--C--AT
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 I 3
s Nomascus_annamensis.k141_220265                              24 6 +      1763 T--TA--T--GC
i Nomascus_annamensis.k141_220265                       n 104 C 0
s Nomascus_concolor.k141_226614                               817 6 -      5092 T--TA--T--GC
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_642452                            1600 6 +      2851 T--TA--T--GC
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             24535 6 -  18771707 T--TA--T--GC
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  2238 6 +      4512 T--TA--T--GC
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                30418 6 +   3668941 C--TA--T--AT
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 I 3
s Nycticebus_bengalensis.LG16                            65566558 6 -  95554990 T--TA--T--AC
i Nycticebus_bengalensis.LG16                           I 8 C 0
s Nycticebus_coucang.k141_2051882                            3287 6 +      6470 T--TA--T--AC
i Nycticebus_coucang.k141_2051882                       I 8 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65668896 6 +  89412551 T--TA--T--AC
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     I 8 C 0
s Ochotona_princeps.JH802095.1                            4995569 2 -  23139505 T--T--------
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3685090 5 +  10294119 a--t---t--at
i Octodon_degus.JH651621.1                              I 1 C 0
s Odobenus_rosmarus.KB229587.1                            1048486 6 +   1475581 t--ta--t--at
i Odobenus_rosmarus.KB229587.1                          I 73 n 39
s Odocoileus_virginianus.KZ101650.1                       1079196 8 +   1425656 t--atata--ct
i Odocoileus_virginianus.KZ101650.1                     I 28 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         36490 8 +     78940 T--ATgta--ct
i Okapia_johnstoni.LVCL01S0017931.1                     I 28 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  124854 6 +    145789 T--GA--T--AT
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  36658 5 +     62360 C--T---T--AT
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7224203 8 -   7562323 t--atata--ct
i Orcinus_orca.KB316965.1                               I 26 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              43473 6 -     66828 C--TA--T--AC
i Orycteropus_afer.OryAfe_flattened_line_13509          I 27 C 0
s Oryctolagus_cuniculus.CM000803.1                      141875839 6 + 163896628 t--ta--t--aa
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      307703 6 -    505867 C--TA--T--AT
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 I 3
s Otolemur_crassicaudatus.k141_321880                       38462 6 +     38679 T--TA--T--AC
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18007889 6 -  38779656 t--ta--t--ac
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134076755 8 - 275406953 t--atata--ct
i Ovis_aries.CM001582.2                                 I 27 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      77969 8 +    140051 T--ATATA--CT
i Ovis_canadensis.OviCan_scaffold_6251                  I 27 C 0
s Pan_paniscus.CM003386.1                               127574243 6 - 205426864 T--TA--T--AC
i Pan_paniscus.CM003386.1                               I 62 C 0
s Pan_troglodytes.CM009241.2                            120151396 6 - 196562556 T--TA--T--AC
i Pan_troglodytes.CM009241.2                            I 62 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  33827 6 +    295523 T--TA--T--TT
i Panthera_onca.PanOnc_flattened_line_1615              I 23 I 3
s Panthera_pardus.KV860323.1                              3637563 6 +  18214204 t--ta--t--tt
i Panthera_pardus.KV860323.1                            I 23 I 3
s Panthera_tigris.KE721879.1                              5027236 6 -   6340057 t--ta--t--tt
i Panthera_tigris.KE721879.1                            I 23 I 3
s Pantholops_hodgsonii.KE114631.1                         1065615 8 -   1292953 t--atata--ct
i Pantholops_hodgsonii.KE114631.1                       I 27 C 0
s Papio_anubis.CM001492.2                               188155835 6 - 188283584 T--TA--T--AC
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             4151 6 +      5367 T--TA--T--AC
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47513222 6 +  47705337 T--TA--T--AC
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 67199 6 -    104429 T--TA--T--AC
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    5732 6 +     14967 T--TA--T--AC
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 1592 6 -      7628 T--TA--T--AC
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    115281 6 -    135482 T--TA--T--TT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 I 22 I 3
s Perodicticus_ibeanus.k141_117958                           4877 6 -     23713 T--TA--T--AT
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            24186 6 -     27972 T--TA--T--AC
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      43170 2 -     45160 -------T--A-
i Perognathus_longimembris.PerPac_flattened_line_22291  I 3 C 0
s Peromyscus_maniculatus.KI615518.1                       4949891 6 -   8017169 t--ta--t--at
i Peromyscus_maniculatus.KI615518.1                     I 22 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    12028 3 -     36578 -------T--GT
i Petromus_typicus.PetTyp_scaffold_33007                I 22 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            120810 8 -    122454 T--ATATA--CT
i Phocoena_phocoena.PhoPho_flattened_line_11948         I 26 C 0
s Piliocolobus_badius.k141_1987485                           1617 6 -      5908 T--TA--T--AT
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       2241 6 -     17985 T--TA--T--AT
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            1608 6 +      7694 T--TA--T--AT
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26740086 6 +  26888534 T--TA--T--AT
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            96987 6 +    112873 T--TA--T--AT
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 I 4
s Pithecia_albicans.k141_991845                             43220 6 -     61926 T--TA--T--AC
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        24651 6 +     78826 T--TA--T--AC
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              8600 6 -     15800 T--TA--T--AC
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        11798 6 -     16101 T--TA--T--AC
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          5107 6 +      9673 T--TA--T--AC
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13474103 6 -  19735023 T--TA--T--AC
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           13009 6 -     31692 T--TA--T--AC
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           4890 8 +     21690 T--ATATA--CT
i Platanista_gangetica.PlaMin_flattened_line_72990      I 26 C 0
s Plecturocebus_bernhardi.k141_959214                       22442 6 +     44506 T--TA--T--AC
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        22654 6 +     67491 T--TA--T--AC
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      12893 6 -     98129 T--TA--T--AC
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     22493 6 +    147771 T--TA--T--AC
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        22748 6 -     23762 T--TA--T--AC
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          3214 6 -     55515 T--TA--T--AC
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         22567 6 +    152463 T--TA--T--AC
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                        284 6 -    119457 T--TA--T--AC
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         12289 6 +    134592 T--TA--T--AC
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          22877 6 -     75465 T--TA--T--AC
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              186769 6 -    373494 T--TA--T--AC
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19807417 6 +  19899266 T--TA--T--AC
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               5343 6 -     15069 T--TA--T--AC
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              5477 6 +     14865 T--TA--T--AC
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                76830 6 +     78963 T--TA--C--AT
i Procavia_capensis.ProCapCap_scaffold_15315            I 27 C 0
s Prolemur_simus.MPIZ01000048.1                           6848138 6 +  12164890 t--ta--c--at
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coronatus.k141_1353159                         3201 5 +     11805 T---A--T--AT
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           42537 6 +     52369 T--TA--T--AT
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         34925 6 -     44753 T--TA--T--AT
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            16847 6 +     27322 T--TA--T--AT
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       16482 6 -     53241 T--TA--T--AT
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         38754 5 -     48185 ---TA--T--AT
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           33811 6 +     77221 t--aa--t--at
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            3374 6 -     27784 T--TA--C--At
i Pteronotus_parnellii.KE867983.1                       C 0 I 3
s Pteronura_brasiliensis.PteBra_flattened_line_1343        246148 6 -    344369 T--TA--T--AT
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 I 3
s Pteropus_alecto.KB031157.1                             13245477 6 -  17261082 T--TA--T--AC
i Pteropus_alecto.KB031157.1                            C 0 I 4
s Pteropus_vampyrus.KN525959.1                             603432 6 -   3946241 T--TA--T--AC
i Pteropus_vampyrus.KN525959.1                          C 0 I 4
s Puma_concolor.QAVW01000427.1                          131533821 6 - 161321710 t--ta--t--tt
i Puma_concolor.QAVW01000427.1                          I 23 I 3
s Pygathrix_cinerea.k141_374971                             29461 6 +     56732 T--TA--T--AC
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6805952 6 +   6970761 T--TA--T--AC
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             5346 6 +     18040 T--TA--T--AC
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                15273 8 +     68503 T--ATATA--CT
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 28 C 0
s Rattus_norvegicus.chr11                                13915110 6 +  90463843 t--ta--t--at
i Rattus_norvegicus.chr11                               I 25 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1787312 6 +   2252614 T--TA--T--AC
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 I 3
s Rhinopithecus_bieti.k119_1391695                           1574 6 -      1866 T--TA--T--AC
i Rhinopithecus_bieti.k119_1391695                      C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206377231 6 - 206558726 T--TA--T--AC
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44856131 6 -  45163003 T--TA--T--AC
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                18801 6 +    109198 T--TA--T--AC
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 I 4
s Saiga_tatarica.SaiTat_scaffold_82192                       7435 8 +     12214 T--ATATA--CT
i Saiga_tatarica.SaiTat_scaffold_82192                  I 27 C 0
s Saimiri_boliviensis.NW_024100938.1                     15672308 6 -  43202129 T--TA--T--AC
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        4225 6 +     34089 T--TA--T--AC
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              4166 6 -     60842 T--TA--T--AC
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              4261 6 +     67014 T--TA--T--AC
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              4239 6 +     60816 T--TA--T--AC
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 4176 6 -     76454 T--TA--T--AC
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17340901 6 -  30362882 T--TA--T--AC
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         20260 6 -     62485 T--TA--T--AC
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   31795 6 -    114521 T--TT--T--AC
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        2958 6 +     15331 T--TA--T--AC
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       8355 6 +     20762 T--TA--T--AC
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         118357 6 +    130994 T--TA--T--AC
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           37144 6 +     46263 T--TA--T--AC
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     30258 6 +     42640 T--TA--T--AC
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        13302 6 +     30600 T--TA--T--AC
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   99846 6 -    120886 T--TA--T--AT
i Sigmodon_hispidus.SigHis_scaffold_11332               I 22 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            18375 6 +    739146 T--AT--T--AC
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2239314 6 +   2842873 t--ta--t--ac
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             234270 6 -    276980 T--TA--T--AT
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 I 3
s Suricata_suricatta.SurSur_flattened_line_20339            27087 6 +     62062 T--TA--T--TT
i Suricata_suricatta.SurSur_flattened_line_20339        I 23 I 3
s Sus_scrofa.CM000824.4                                 189271359 6 + 218635234 t--at--a--ca
i Sus_scrofa.CM000824.4                                 I 22 C 0
s Symphalangus_syndactylus.tarseq_24                        14517 6 -  13920577 T--TA--T--GC
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               5539 6 -      6213 T--TA--T--AT
i Tadarida_brasiliensis.TadBra_scaffold_145589          I 80 I 3
s Tamandua_tetradactyla.TamTet_scaffold_26877               14217 6 +     45698 T--TA--T--AC
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 I 3
s Tapirus_indicus.TapInd_scaffold_176                      806383 6 +   1148477 T--TA--C--AC
i Tapirus_indicus.TapInd_scaffold_176                   I 1 I 3
s Tapirus_terrestris.TapTer_scaffold_14939                  57074 6 +     99546 T--TA--C--AC
i Tapirus_terrestris.TapTer_scaffold_14939              I 1 I 3
s Tarsius_lariang.k141_609102                               26045 6 +     42269 T--TA--T--AT
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               59361 6 +     65473 T--TA--T--AT
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194007362 6 - 194193292 T--TA--T--AC
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             38849 6 -     47444 T--GT--T--GT
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         I 23 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  5050 6 +      6782 T--TA--T--AC
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 I 2
s Tonatia_saurophila.TonSau_scaffold_3334                  135375 6 -    259118 T--TA--T--TT
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 I 3
s Trachypithecus_auratus.k141_738098                        26462 6 +     38948 T--TA--T--AC
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   20192 6 -     32910 T--TA--T--AC
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      1579 6 -     12939 T--TA--T--AC
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       1514 6 -     14244 T--TA--T--AC
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           42912 6 -     54611 T--TA--T--AC
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                         718 6 -     11566 T--TA--T--AC
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     2890 6 -     15592 T--TA--T--AC
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          1547 6 +     14371 T--TA--T--AC
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  51299 6 +     51589 T--TA--T--AC
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       14480 6 +     14732 T--TA--T--AC
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       4952 6 -     28054 T--TA--T--AC
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44659752 6 -  44834318 T--TA--T--AC
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       2055 6 +     13828 T--TA--T--AC
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   4666 8 +     90398 T--ATATA--CT
i Tragulus_javanicus.TraJav_scaffold_14717              I 28 C 0
s Trichechus_manatus.JH594618.1                          16082013 6 +  31416278 T--TA--T--AC
i Trichechus_manatus.JH594618.1                         I 27 C 0
s Tupaia_chinensis.KB320831.1                             2792419 6 -   3938065 T--TA--T--AC
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    4624 6 +     13056 T--TA--T--AC
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69312920 8 -  96451834 t--atata--ct
i Tursiops_truncatus.MRVK01000923.1                     I 26 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                    806 6 +     10241 T--TA--T--AC
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6514286 6 +  28682327 T--TA--T--AT
i Ursus_maritimus.KK498671.1                            C 0 I 3
s Varecia_rubra.k141_432109                                  4839 6 -     20643 T--TA--C--AT
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             24380 6 -     33872 T--TA--C--AT
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1524165 6 -   2331223 t--at--a--ta
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                137796 6 -    281493 C--TA--T--AT
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 I 3
s Xerus_inauris.XerIna_scaffold_7898                       126426 6 -    134049 T--TA--T--AC
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        213764 6 -    227762 T--TA--T--AT
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 I 3
s Zapus_hudsonius.ZapHud_scaffold_64392                     14512 6 -     20485 G--AA--T--AT
i Zapus_hudsonius.ZapHud_scaffold_64392                 I 25 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           6415 8 -      8775 T--ATATA--CT
i Ziphius_cavirostris.ZipCav_flattened_line_127025      I 26 I 2
e Sorex_araneus.JH798170.1                               17750754 3364 -  27805282 I
e Erinaceus_europaeus.JH835290.1                         11531598 1064 +  16010500 I
e Elephantulus_edwardii.JH947210.1                        7804622 10712 +  15467074 I
e Hylobates_pileatus_a.tarseq_592                             33341 34 -     60944 I
e Propithecus_coquerelli.NW_012147997.1                    667273 6500 -   2312742 I
e Nannospalax_galili.KL201303.1                            117951 13 +    362372 I
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I
e Cavia_aperea.AVPZ01000278.1                            15786075 94 -  24422027 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               11373 4 +    209709 ACT---T
s Acomys_cahirinus.AcoCah_scaffold_1625                    112123 2 -    189883 AC-----
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   16429 3 -     22067 AC----T
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                    859 4 -     60446 ACT---T
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         1580 4 -     29318 ACT---T
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                          517 2 +     38766 AC-----
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          1474 4 -     80423 ACT---T
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             9771 4 -     18050 ACT---T
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                 10864 4 -     11521 ACT---T
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                             10448 4 -     21359 ACT---T
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                  63 4 +      2129 ACT---T
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          9747 4 -     10438 ACT---T
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            6403 4 +      7047 ACT---T
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             9683 4 +     10410 ACT---T
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            3491 4 -      4927 ACT---T
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             6420 4 +      6429 ACT---T
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Aotus_azarae.k141_3170768                                 62134 4 +     78111 ACA---T
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            5075 4 +     22701 ACA---T
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5749032 4 +   9889416 aca---t
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             5619 4 -    104377 ACA---T
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               5621 4 +     23246 ACA---T
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     3247 1 +      5067 ------T
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_587554                         487 4 +      9265 ACG---T
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9538880 4 +  39197703 ACT---T
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             60151 4 +     85812 ACT---T
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                11163 4 +     89302 ACT---T
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             15668 4 -     58268 ACT---T
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             63659 4 +    119057 ACT---T
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               5628 4 -     25888 ACT---T
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 6285 1 -     16375 ------T
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              2605 1 +      2719 ------T
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Cacajao_ayresi.k141_724503                               113518 4 -    171031 ACT---T
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 12549 4 +    125063 ACT---T
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                14594 4 -    216513 ACT---T
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        7134 4 -    134917 ACT---T
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Carlito_syrichta.NW_007248099.1                          308569 4 +    345090 act---t
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   30248 2 +     33760 --T---C
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Cavia_porcellus.DS562889.1                             15798054 4 -  24440124 act---t
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       176245 4 +    436027 ACT---T
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18890363 4 -  29618158 ACT---T
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 7907 4 -     26817 ACT---T
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                12147 4 +     25043 ACT---T
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         7603 4 +     21754 ACT---T
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6554802 4 +   6739814 ACt---t
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      26279 4 +     60454 ACT---T
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          1484 4 -     21101 ACT---T
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         58794 4 -    107033 ACT---T
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        1686 4 -     17608 ACT---T
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          29181 4 +     30494 ACT---T
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          58027 4 -     59240 ACT---T
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          1728 4 +     16677 ACT---T
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           23886 4 +     35983 ACT---T
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11990414 4 +  12117833 ACT---T
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46477172 4 +  46592721 ACT---T
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      40723 4 -     45581 ACT---T
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       1729 4 +     35577 ACT---T
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        1505 4 -     25661 ACT---T
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        1483 4 -     17744 ACT---T
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        21099 4 +     37128 ACT---T
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           58569 3 -     68416 GCT----
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            7612 4 +     13308 GCT---T
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             5164 4 -     18223 ACT---T
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             22187 4 +     25473 ACT---T
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           41222 4 +     57117 ACT---T
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          45901 4 +     54541 ACT---T
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15961283 4 +  43084221 gct---t
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         70725 4 +    196370 ACT---T
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          14905 4 +     40510 ACT---T
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15138645 4 -  15256731 ACT---T
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      33692 4 -     53260 ACT---T
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101144256 4 + 101219884 ACt---t
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10886022 4 +  10971483 ACt---t
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147664186 4 + 156195979 ACT---T
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            16171 4 +     23629 ACT---T
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 278079 2 -    399297 AC-----
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53028742 2 +  72327488 ac-----
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  207691 4 -    956709 GCT---G
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 30268 4 -     67205 GCT---T
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                17299 4 +     26546 GCT---T
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 I 3
s Dasyprocta_punctata.DasPun_flattened_line_634             58385 4 -    236241 GCT---T
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16844429 4 +  31942871 GCT---T
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   156540 4 +    228994 GCC---T
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3655643 2 +   4240102 --g---t
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 27276 2 +     28912 --G---T
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                35636 4 -     73477 ACT---T
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        239306 2 -    369425 gc-----
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           6420 2 -      7838 AC-----
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Erythrocebus_patas.Contig8                             48770823 4 -  48907691 ACT---T
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eulemur_albifrons.k141_715837                              4620 3 +     13586 GCT----
i Eulemur_albifrons.k141_715837                         C 0 I 3
s Eulemur_collaris.k141_311830                               4557 3 -      6809 GCT----
i Eulemur_collaris.k141_311830                          C 0 I 11
s Eulemur_coronatus.k141_3240342                            11030 3 +     36558 GCT----
i Eulemur_coronatus.k141_3240342                        C 0 I 2
s Eulemur_flavifrons.k141_903901                             7349 3 +     60246 GCT----
i Eulemur_flavifrons.k141_903901                        C 0 I 2
s Eulemur_fulvus.k141_653297                                10828 3 +    109717 GCT----
i Eulemur_fulvus.k141_653297                            C 0 I 2
s Eulemur_macaco.k141_1341545                               15211 3 +     16540 GCT----
i Eulemur_macaco.k141_1341545                           C 0 I 2
s Eulemur_mongoz.k141_825972                                15484 4 +     27497 GCT---T
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           17941 3 +     26808 GCT----
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                32676 3 +     46535 GCT----
i Eulemur_rufus.k141_1620292                            C 0 I 3
s Eulemur_sanfordi.k141_186399                              15398 3 -     29447 GCT----
i Eulemur_sanfordi.k141_186399                          C 0 I 4
s Galago_moholi.ctg555                                     210363 4 -    847004 ACT---T
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           12742 4 -     43889 ACT---T
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           9819 4 +     27357 ACT---T
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               155808 4 +    324696 ACT---T
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 I 3
s Glis_glis.GliGli_scaffold_79770                           12613 4 -     18683 AGC---A
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               4889 4 -     14630 ACT---T
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119651988 4 - 195582420 ACt---t
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   77158 4 +    118900 AGC---A
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         1403 3 +     10286 G-T---T
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_1254239                            9579 3 +      9690 G-T---T
i Hapalemur_gilberti.k141_1254239                       C 0 C 0
s Hapalemur_griseus.k141_1387522                             5209 3 +     56096 G-T---T
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        28459 3 -     42470 G-T---T
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        45082 3 -     54384 G-T---T
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2550618 7 +  31725842 cttttat
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Hoolock_leuconedys.ctg79                                      4295 4 -   7690867 ACT---T
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           18518 4 -    119109 ACT---T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              4721 4 +      5897 ACT---T
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_624065                               1585 4 +      2112 ACT---T
i Hylobates_agilis.k141_624065                          C 0 C 0
s Hylobates_klossii.k141_466549                             11161 4 +     11537 ACT---T
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14624266 4 -  25970782 ACT---T
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            1522 4 -      2977 ACT---T
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     5686 4 +     22540 GTT---T
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7125402 1 +  13083262 ------t
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_4418183                                   1050 3 -      1457 GCT----
i Indri_indri.k141_4418183                              C 0 I 2
s Jaculus_jaculus.JH725517.1                              8565438 3 +  11848649 ac----t
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Lagothrix_lagothricha.k141_12968                          49748 4 -    147782 ACT---T
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lemur_catta.scaffold_1                                258406763 4 - 285822530 GCT---T
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        23516 4 +     39228 GCT---T
i Lepilemur_ankaranensis.k141_884009                    C 0 I 1
s Lepilemur_dorsalis.k141_134267                            52902 4 +     63517 GCT---T
i Lepilemur_dorsalis.k141_134267                        C 0 I 2
s Lepilemur_ruficaudatus.k141_617879                        78159 3 +    116806 GCT----
i Lepilemur_ruficaudatus.k141_617879                    C 0 I 2
s Lepilemur_septentrionalis.k141_578524                     31155 4 -     33031 GCT---T
i Lepilemur_septentrionalis.k141_578524                 C 0 I 1
s Lepus_americanus.LepAme_scaffold_62849                    12803 1 +     22452 ------A
i Lepus_americanus.LepAme_scaffold_62849                C 0 I 1
s Lophocebus_aterrimus.ctg55                             19247891 4 +  19376315 ACT---T
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           10130 4 +     84689 ACT---T
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3777879 4 +   6799190 ACT---T
i Loris_tardigradus.ctg97                               C 0 C 0
s Macaca_arctoides.k141_2201161                             19631 4 +     74745 ACT---T
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12706087 4 +  12821369 ACT---T
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                1732 4 -      3136 ACT---T
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           46549 4 +     63263 ACT---A
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                 1252 4 -      2568 ACT---A
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 1838 4 -      7381 ACT---T
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  45056 4 -     79256 ACT---T
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196035164 4 + 196197964 ACt---t
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11445332 4 +  11645122 ACt---t
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   4003 4 -     46448 ACT---T
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                1675 4 -     13212 ACT---T
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 15356 4 -     55006 ACT---T
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43840473 4 +  43892939 ACT---T
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               16642 4 -     24607 ACT---T
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               4008 4 -     27140 ACT---T
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43437050 4 -  43563597 ACT---T
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4449876 4 -   4543643 ACT---T
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36873244 1 +  64221397 ------t
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               12265 2 +     15977 AC-----
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1046450 2 -  26018355 at-----
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Microcebus_murinus.CM007691.1                          16509783 4 +  47401472 gct---t
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22819607 2 -  98408828 AC-----
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         1603 4 +     29742 ACT---T
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirza_zaza.k141_226143                                     5169 4 +      8497 GCT---T
i Mirza_zaza.k141_226143                                C 0 C 0
s Mus_caroli.LT608236.1                                  70766116 2 +  92629107 AC-----
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75489175 2 +  98207768 AC-----
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67555405 2 +  89017189 AC-----
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74330353 2 +  97876770 AC-----
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             11399 4 +     98495 AGC---A
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 217 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     89547 4 -    117718 GCT---T
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Nannospalax_galili.KL201303.1                            117964 4 +    362372 aat---g
i Nannospalax_galili.KL201303.1                         I 13 C 0
s Nasalis_larvatus.k141_153429                               8104 4 +     48152 ACT---T
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Nomascus_annamensis.k141_220265                              30 4 +      1763 ACT---T
i Nomascus_annamensis.k141_220265                       C 0 C 0
s Nomascus_concolor.k141_226614                               823 4 -      5092 ACT---T
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_642452                            1606 4 +      2851 ACT---T
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             24541 4 -  18771707 ACT---T
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  2244 4 +      4512 ACT---T
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nycticebus_bengalensis.LG16                            65566564 4 -  95554990 ACT---T
i Nycticebus_bengalensis.LG16                           C 0 I 1
s Nycticebus_coucang.k141_2051882                            3293 4 +      6470 ACT---T
i Nycticebus_coucang.k141_2051882                       C 0 I 1
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65668902 6 +  89412551 ACT-TTT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 I 1
s Octodon_degus.JH651621.1                                3685095 4 +  10294119 gct---t
i Octodon_degus.JH651621.1                              C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141875845 1 + 163896628 ------a
i Oryctolagus_cuniculus.CM000803.1                      C 0 I 1
s Ondatra_zibethicus.OndZib_scaffold_6821                  124860 2 +    145789 AC-----
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  36663 2 +     62360 AC-----
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       38468 4 +     38679 ACT---T
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18007895 4 -  38779656 act---t
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Pan_paniscus.CM003386.1                               127574249 4 - 205426864 ACt---t
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120151402 4 - 196562556 ACt---t
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Papio_anubis.CM001492.2                               188155841 4 - 188283584 ACt---t
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             4157 4 +      5367 ACT---T
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47513228 4 +  47705337 ACT---T
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 67205 4 -    104429 ACT---T
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    5738 4 +     14967 ACT---T
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 1598 4 -      7628 ACT---T
i Papio_ursinus.k141_1345919                            C 0 C 0
s Perodicticus_ibeanus.k141_117958                           4883 4 -     23713 ACT---T
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            24192 4 -     27972 ACT---T
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      43172 2 -     45160 --A---T
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4949897 2 -   8017169 ac-----
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    12031 4 -     36578 GTT---T
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Piliocolobus_badius.k141_1987485                           1623 4 -      5908 ACT---T
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       2247 4 -     17985 ACT---T
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            1614 4 +      7694 ACT---T
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26740092 4 +  26888534 ACt---t
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pithecia_albicans.k141_991845                             43226 4 -     61926 ACT---T
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        24657 4 +     78826 ACT---T
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              8606 4 -     15800 ACT---T
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        11804 4 -     16101 ACT---T
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          5113 4 +      9673 ACT---T
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13474109 4 -  19735023 ACT---T
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           13015 4 -     31692 ACT---T
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       22448 4 +     44506 ACT---T
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        22660 4 +     67491 ACT---T
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      12899 4 -     98129 ACT---T
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     22499 4 +    147771 ACT---T
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        22754 4 -     23762 ACT---T
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          3220 4 -     55515 ACT---T
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         22573 4 +    152463 ACT---T
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                        290 4 -    119457 ACT---T
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         12295 4 +    134592 ACT---T
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          22883 4 -     75465 ACT---T
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              186775 4 -    373494 ACt---t
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19807423 4 +  19899266 ACT---T
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               5349 4 -     15069 ACT---T
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              5483 4 +     14865 ACT---T
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6848144 4 +  12164890 gct---t
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coronatus.k141_1353159                         3206 4 +     11805 GCT---T
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           42543 4 +     52369 GTT---T
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         34931 4 -     44753 GCT---T
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            16853 4 +     27322 GCT---T
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       16488 4 -     53241 GCT---T
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         38759 4 -     48185 GCT---T
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           33817 2 +     77221 ac-----
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pygathrix_cinerea.k141_374971                             29467 4 +     56732 ACT---T
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6805958 4 +   6970761 ACT---T
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             5352 4 +     18040 ACT---T
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rattus_norvegicus.chr11                                13915116 2 +  90463843 at-----
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinopithecus_bieti.k119_1391695                           1580 4 -      1866 ACT---T
i Rhinopithecus_bieti.k119_1391695                      C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206377237 4 - 206558726 ACt---t
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44856137 4 -  45163003 ACT---T
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15672314 4 -  43202129 act---t
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        4231 4 +     34089 ACT---T
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              4172 4 -     60842 ACT---T
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              4267 4 +     67014 ACT---T
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              4245 4 +     60816 ACT---T
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 4182 4 -     76454 ACT---T
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17340907 4 -  30362882 ACT---T
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         20266 4 -     62485 ACT---T
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Semnopithecus_entellus.k141_1572367                        2964 4 +     15331 AGT---T
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       8361 4 +     20762 AGT---T
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         118363 4 +    130994 AGT---T
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           37150 4 +     46263 AGT---T
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     30264 4 +     42640 AGT---T
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        13308 4 +     30600 AGT---T
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2239320 1 +   2842873 ------t
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   99852 2 -    120886 AC-----
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        14523 4 -  13920577 ACT---G
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tarsius_lariang.k141_609102                               26051 4 +     42269 ACT---T
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               59367 4 +     65473 ACT---T
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194007368 4 - 194193292 ACt---t
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             38855 4 -     47444 GTT---T
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Trachypithecus_auratus.k141_738098                        26468 4 +     38948 AGT---T
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   20198 4 -     32910 AGT---T
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      1585 4 -     12939 AGT---T
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       1520 4 -     14244 AGT---T
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           42918 4 -     54611 AGT---T
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                         724 4 -     11566 AGT---T
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     2896 4 -     15592 AGT---T
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          1553 4 +     14371 AGT---T
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  51305 4 +     51589 AGT---T
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       14486 4 +     14732 AGT---T
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       4958 4 -     28054 AGT---T
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44659758 4 -  44834318 AGT---T
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       2061 4 +     13828 AGT---T
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       126432 1 -    134049 ------T
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Tupaia_chinensis.KB320831.1                             2792425 3 -   3938065 ACT----
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    4630 3 +     13056 ACT----
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Varecia_rubra.k141_432109                                  4845 3 -     20643 GCT----
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             24386 3 -     33872 GCT----
i Varecia_variegata.k141_775891                         C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     14518 3 -     20485 AC----A
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
e Eptesicus_fuscus.JH977687.1                             4703692 3 +   6522550 I
e Macroglossus_sobrinus.MacSob_scaffold_879                701101 4 +    802869 I
e Sorex_araneus.JH798170.1                               17750754 3364 -  27805282 I
e Erinaceus_europaeus.JH835290.1                         11531598 1064 +  16010500 I
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           2310 2 -      6963 I
e Ochotona_princeps.JH802095.1                            4995571 0 -  23139505 C
e Suricata_suricatta.SurSur_flattened_line_20339            27093 3 +     62062 I
e Ziphius_cavirostris.ZipCav_flattened_line_127025           6423 2 -      8775 I
e Zalophus_californianus.ZalCal_flattened_line_4097        213770 3 -    227762 I
e Vulpes_lagopus.VulLag_flattened_line_2045                137802 3 -    281493 I
e Vicugna_pacos.KN269600.1                                1524171 0 -   2331223 C
e Ursus_maritimus.KK498671.1                              6514292 3 +  28682327 I
e Uropsilus_gracilis.UroGra_scaffold_69449                    812 0 +     10241 C
e Tursiops_truncatus.MRVK01000923.1                      69312928 0 -  96451834 C
e Trichechus_manatus.JH594618.1                          16082019 0 +  31416278 C
e Tragulus_javanicus.TraJav_scaffold_14717                   4674 0 +     90398 C
e Tonatia_saurophila.TonSau_scaffold_3334                  135381 3 -    259118 I
e Tolypeutes_matacus.TolMat_scaffold_269431                  5056 2 +      6782 I
e Tapirus_terrestris.TapTer_scaffold_14939                  57080 3 +     99546 I
e Tapirus_indicus.TapInd_scaffold_176                      806389 3 +   1148477 I
e Tamandua_tetradactyla.TamTet_scaffold_26877               14223 3 +     45698 I
e Tadarida_brasiliensis.TadBra_scaffold_145589               5545 3 -      6213 I
e Sus_scrofa.CM000824.4                                 189271365 0 + 218635234 C
e Spilogale_gracilis.SpiGra_flattened_line_905             234276 3 -    276980 I
e Solenodon_paradoxus.SolPar_flattened_line_1012            18381 0 +    739146 C
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   31801 0 -    114521 C
e Saiga_tatarica.SaiTat_scaffold_82192                       7443 0 +     12214 C
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                18807 4 +    109198 I
e Rhinolophus_sinicus.LVEH01000179.1                      1787318 3 +   2252614 I
e Rangifer_tarandus.RanTarSib_scaffold_24239                15281 0 +     68503 C
e Puma_concolor.QAVW01000427.1                          131533827 3 - 161321710 I
e Pteropus_vampyrus.KN525959.1                             603438 4 -   3946241 I
e Pteropus_alecto.KB031157.1                             13245483 4 -  17261082 I
e Pteronura_brasiliensis.PteBra_flattened_line_1343        246154 3 -    344369 I
e Pteronotus_parnellii.KE867983.1                            3380 3 -     27784 I
e Procavia_capensis.ProCapCap_scaffold_15315                76836 0 +     78963 C
e Platanista_gangetica.PlaMin_flattened_line_72990           4898 0 +     21690 C
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            96993 4 +    112873 I
e Phocoena_phocoena.PhoPho_flattened_line_11948            120818 0 -    122454 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    115287 3 -    135482 I
e Pantholops_hodgsonii.KE114631.1                         1065623 0 -   1292953 C
e Panthera_tigris.KE721879.1                              5027242 3 -   6340057 I
e Panthera_pardus.KV860323.1                              3637569 3 +  18214204 I
e Panthera_onca.PanOnc_flattened_line_1615                  33833 3 +    295523 I
e Ovis_canadensis.OviCan_scaffold_6251                      77977 0 +    140051 C
e Ovis_aries.CM001582.2                                 134076763 0 - 275406953 C
e Otocyon_megalotis.JAEUCK010005121.1                      307709 3 -    505867 I
e Orycteropus_afer.OryAfe_flattened_line_13509              43479 0 -     66828 C
e Orcinus_orca.KB316965.1                                 7224211 0 -   7562323 C
e Okapia_johnstoni.LVCL01S0017931.1                         36498 0 +     78940 C
e Odocoileus_virginianus.KZ101650.1                       1079204 0 +   1425656 C
e Odobenus_rosmarus.KB229587.1                            1048492 39 +   1475581 I
e Nyctereutes_procyonoides.CAJHUB010000786.1                30424 3 +   3668941 I
e Noctilio_leporinus.NocLep_scaffold_12062                  48822 3 +     94413 I
e Neophocaena_asiaeorientalis.KZ688543.1                  3950529 0 -   4490290 C
e Neomonachus_schauinslandi.NINY01007774.1                4484379 3 -  14209539 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             4564 3 -      8794 I
e Myotis_myotis.MyoMyo_scaffold_6123                        10157 5 +     66751 I
e Myotis_lucifugus.GL429887.1                             3464943 5 -   3747815 I
e Myotis_davidii.KB114863.1                               5019037 5 +   6462685 I
e Myotis_brandtii.KE161952.1                               967362 5 +   8389877 I
e Mustela_putorius.JH417978.1                             4423846 3 -  28371801 I
e Murina_feae.MurFea_scaffold_2254                          19065 3 -    100666 I
e Mungos_mungo.MunMun_flattened_line_8729                  144411 3 -    168139 I
e Moschus_moschiferus.MosMos_scaffold_78805                   515 0 -     19904 C
e Mormoops_blainvillei.MorMeg_scaffold_2952                160722 3 +    265003 I
e Monodon_monoceros.MonMon_M_scaffold_5598                 145914 0 +    154973 C
e Mirounga_angustirostris.MirAng_flattened_line_8852        10987 3 -    104932 I
e Miniopterus_schreibersii.MinSch_scaffold_24116            33856 3 +     45743 I
e Miniopterus_natalensis.LDJU01000022.1                   8209203 3 +  10048721 I
e Micronycteris_hirsuta.MicHir_scaffold_37978               22210 3 -     32043 I
e Microgale_talazaci.MicTal_scaffold_34660                  31132 0 -     48017 C
e Mellivora_capensis.MelCap_flattened_line_15433              479 3 -     87323 I
e Megaderma_lyra.MegLyr_scaffold_3562                       63916 3 -    234502 I
e Manis_pentadactyla.KN017078.1                             35235 3 +     58827 I
e Manis_javanica.JSZB01003966.1                            145159 3 +    252755 I
e Lycaon_pictus.CM007556.1                               11087619 3 +  39895028 I
e Loxodonta_africana.GL010040.1                          20591569 0 -  62548349 C
e Lipotes_vexillifer.KE558548.1                            135479 0 +   3060487 C
e Leptonychotes_weddellii.KB714749.1                      3085474 4 -   3498232 I
e Lasiurus_borealis.LasBor_scaffold_5102                   113783 3 -    115756 I
e Kogia_breviceps.KogBre_flattened_line_35920               23142 0 +     37189 C
e Inia_geoffrensis.IniGeo_flattened_line_66725               8526 0 +     17520 C
e Hyaena_hyaena.HyaHya_flattened_line_20729                 16795 0 -     67322 C
e Hipposideros_galeritus.HipGal_scaffold_104691              7058 3 -      9143 I
e Hipposideros_armiger.JXIK01001085.1                      277906 3 -    477199 I
e Hippopotamus_amphibius.HipAmp_scaffold_1308              146620 0 +    277961 C
e Heterohyrax_brucei.HetBruBak_scaffold_25354               56972 0 +     73687 C
e Hemitragus_hylocrius.HemHyl_scaffold_16669                26969 0 -     91191 C
e Helogale_parvula.HelPar_flattened_line_22962              16715 3 +     53719 I
e Giraffa_tippelskirchi.LVKQ01S012154.1                    180770 0 -    189561 C
e Felis_nigripes.FelNig_flattened_line_8080                 20679 3 +     52776 I
e Felis_catus_fca126.CM031420.1                         129279534 3 - 158578461 I
e Eubalaena_japonica.EubJap_flattened_line_7756             60986 0 +     89355 C
e Eschrichtius_robustus.EscRob_flattened_line_685          314532 0 +    330699 C
e Equus_przewalskii.ATBW01073585.1                          12421 3 +     92910 I
e Equus_caballus.CM000402.2                              13350931 3 +  41866177 I
e Equus_asinus.JREZ01000062.1                             5852428 3 -   7175178 I
e Enhydra_lutris.KZ291749.1                              85871666 3 +  99434291 I
e Elephantulus_edwardii.JH947210.1                        7804622 10712 +  15467074 I
e Elaphurus_davidianus.JRFZ01086400.1                     1490973 8 +   1727528 I
e Eidolon_helvum.KE772537.1                                 11728 4 +     24177 I
e Echinops_telfairi.JH980316.1                           22994699 1 -  44670279 I
e Diceros_bicornis.DicBicMic_scaffold_9545                   2678 3 +    151128 I
e Dicerorhinus_sumatrensis.PEKH010003161.1                 322028 3 +    993696 I
e Desmodus_rotundus.KZ672188.1                           18698302 3 -  18957592 I
e Delphinapterus_leucas.KZ290064.1                       80036326 0 -  96802777 C
e Dasypus_novemcinctus.JH568778.1                          183184 2 -   6883506 I
e Cryptoprocta_ferox.CryFer_flattened_line_19014            51510 3 -     70449 I
e Crocidura_indochinensis.CroInd_scaffold_88140              1521 0 +     11655 C
e Craseonycteris_thonglongyai.CraTho_scaffold_22679         39196 3 -     40477 I
e Condylura_cristata.JH655880.1                          60612988 0 +  78930452 C
e Choloepus_hoffmanni.KN194586.1                           761296 4 +    964067 I
e Choloepus_didactylus.ChoDid_scaffold_36182                15989 4 -     21363 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_160623         3131 3 -      9338 I
e Catagonus_wagneri.CatWag_scaffold_1305                   158376 0 -    276539 C
e Carollia_perspicillata.CarPer_scaffold_4436               59031 3 +     67245 I
e Capra_hircus.CM004562.1                               135705924 0 - 157403528 C
e Capra_aegagrus.CM003214.1                              21324697 0 + 157394656 C
e Canis_lupus_orion.HG994411.1                           16455178 3 -  44759192 I
e Canis_lupus_familiaris.chr31                           11088163 3 +  39895921 I
e Canis_lupus_dingo.QKWQ01001993.1                       11265629 3 -  35597290 I
e Canis_lupus_VD.CanFam_VD_scaffold_16982                   13987 3 +     87036 I
e CanFam4.chr31                                          11518962 3 +  39901454 I
e Camelus_ferus.KB016973.1                                2972504 0 +   6889770 C
e Camelus_dromedarius.KN271192.1                           396769 0 -  15254737 C
e Camelus_bactrianus.KN276303.1                           3219067 0 -   8989139 C
e Bubalus_bubalis.KI419065.1                              1232279 0 -   1914593 C
e Bos_taurus.CM000177.6                                 136295196 0 - 158972876 C
e Bos_mutus.JH883513.1                                     572000 0 -    998990 C
e Bos_indicus.CM003021.1                                138139463 0 - 161108492 C
e Bison_bison.KN264915.1                                  6559359 0 +   6870073 C
e Beatragus_hunteri.BeaHun_scaffold_21644                   42684 0 -     72089 C
e Balaenoptera_bonaerensis.DF502048.1                        4879 0 -     13118 C
e Balaenoptera_acutorostrata.KI537095.1                  26379648 0 +  51448160 C
e Artibeus_jamaicensis.ArtJam_scaffold_41619                 8238 3 -     29036 I
e Antilocapra_americana.AntAmePen_scaffold_42841            30204 0 +     33004 C
e Anoura_caudifer.AnoCau_scaffold_422                      389827 3 -    631301 I
e Ammotragus_lervia.NIVO01013474.1                        3519621 0 +   4113121 C
e Ailurus_fulgens.LNAC01000003.1                          7094148 2 -  16596857 I
e Ailuropoda_melanoleuca.LNAT01000321.1                  10656803 3 +  23371972 I
e Acinonyx_jubatus.LLWD01000356.1                         2033489 3 +   3721120 I
e Hylobates_pileatus_a.tarseq_592                             33341 34 -     60944 I
e Propithecus_coquerelli.NW_012147997.1                    667273 6500 -   2312742 I
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I
e Cavia_aperea.AVPZ01000278.1                            15786075 94 -  24422027 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               11377  6 +    209709 G-------T----T-T------G------T
s Acinonyx_jubatus.LLWD01000356.1                         2033492  7 +   3721120 t-------t---tt-t------g------t
i Acinonyx_jubatus.LLWD01000356.1                       I 3 I 1
s Acomys_cahirinus.AcoCah_scaffold_1625                    112125 10 -    189883 --------T----T-T------A-AAAGGA
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10656806  7 +  23371972 T-------C-T--A-T------G------T
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 3 I 1
s Ailurus_fulgens.LNAC01000003.1                          7094150  7 -  16596857 t-------c---ta-t------t------t
i Ailurus_fulgens.LNAC01000003.1                        I 2 I 1
s Allactaga_bullata.AllBul_scaffold_70162                   16432  6 -     22067 T-------T----T-T------A------T
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                    863  6 -     60446 G-------T----T-T------G------T
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         1584  6 -     29318 G-------T----T-T------G------T
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                          519  6 +     38766 G-------T----T-T------G------T
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          1478  6 -     80423 G-------T----T-T------G------T
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             9775  3 -     18050 G-------T----T----------------
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                 10868  3 -     11521 G-------T----T----------------
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                             10452  3 -     21359 G-------T----T----------------
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                  67  3 +      2129 G-------T----T----------------
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          9751  3 -     10438 G-------T----T----------------
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            6407  3 +      7047 G-------T----T----------------
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             9687  3 +     10410 G-------T----T----------------
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            3495  3 -      4927 G-------T----T----------------
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             6424  3 +      6429 G-------T----T----------------
i Alouatta_seniculus.k141_990213                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3519621 11 +   4113121 ttccttgtt----t-t--------------
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      389830  7 -    631301 T------TT----T-T------G------T
i Anoura_caudifer.AnoCau_scaffold_422                   I 3 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            30204 11 +     33004 TTCCTTGTT----T-T--------------
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 62138  3 +     78111 G-------T----T----------------
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            5079  3 +     22701 G-------T----T----------------
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5749036  3 +   9889416 g-------t----t----------------
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             5623  3 -    104377 G-------T----T----------------
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               5625  3 +     23246 G-------T----T----------------
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     3248  5 +      5067 T-------T----T-T------A-------
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_587554                         491  2 +      9265 T-------T---------------------
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 8241  7 -     29036 T------TT----T-T------G------T
i Artibeus_jamaicensis.ArtJam_scaffold_41619            I 3 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9538884  3 +  39197703 G-------T----T----------------
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             60155  3 +     85812 G-------T----T----------------
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                11167  3 +     89302 G-------T----T----------------
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             15672  3 -     58268 G-------T----T----------------
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             63663  3 +    119057 G-------T----T----------------
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               5632  3 -     25888 G-------T----T----------------
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 6286 10 -     16375 T-----TTT----T-TTT----G------T
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              2606 10 +      2719 T-----TTT----T-TTT----G------T
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26379648  7 +  51448160 t-------t----t-t-----tg------t
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        4879  7 -     13118 t-------t----t-t-----tg------t
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   42684 11 -     72089 TTCCTTGTT----T-T--------------
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6559359 11 +   6870073 TTCCTTGCT----T-T--------------
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138139463 11 - 161108492 TTCCTTGCT----T-T--------------
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     572000 11 -    998990 TTCCTTGCT----T-T--------------
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136295196 11 - 158972876 TTCCTTGCT----T-T--------------
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1232279 11 -   1914593 ttcctTGCT----T-T--------------
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               113522  3 -    171031 G-------T----T----------------
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 12553  3 +    125063 G-------T----T----------------
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                14598  3 -    216513 G-------T----T----------------
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        7138  3 -    134917 G-------T----T----------------
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3219067  6 -   8989139 t-------a----t-t------g------t
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           396769  6 -  15254737 t-------a----t-t------g------t
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2972504  6 +   6889770 t-------a----t-t------g------t
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11518965  7 +  39901454 T-------C-T--G-T------G------T
i CanFam4.chr31                                         I 3 I 1
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   13990  7 +     87036 T-------C-T--G-T------G------T
i Canis_lupus_VD.CanFam_VD_scaffold_16982               I 3 I 1
s Canis_lupus_dingo.QKWQ01001993.1                       11265632  7 -  35597290 T-------C-T--g-t------g------t
i Canis_lupus_dingo.QKWQ01001993.1                      I 3 I 1
s Canis_lupus_familiaris.chr31                           11088166  7 +  39895921 T-------C-T--g-t------g------t
i Canis_lupus_familiaris.chr31                          I 3 I 1
s Canis_lupus_orion.HG994411.1                           16455181  7 -  44759192 T-------C-T--G-t------g------t
i Canis_lupus_orion.HG994411.1                          I 3 I 1
s Capra_aegagrus.CM003214.1                              21324697 11 + 157394656 ttccttgtt----t-t--------------
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135705924 11 - 157403528 ttccttgtt----t-t--------------
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          308573  5 +    345090 --------t----t-t------g------t
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               59034  7 +     67245 T------TT----T-T------G------T
i Carollia_perspicillata.CarPer_scaffold_4436           I 3 C 0
s Castor_canadensis.CasCan_scaffold_47037                   30250  6 +     33760 T-------T----T-T------A------T
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   158376  6 -    276539 T-------T----T-T------G------T
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_porcellus.DS562889.1                             15798058  3 -  24440124 t-------t----t----------------
i Cavia_porcellus.DS562889.1                            C 0 I 11
s Cavia_tschudii.CavTsc_scaffold_488                       176249  3 +    436027 T-------T----T----------------
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 I 11
s Cebus_albifrons.Contig22                               18890367  3 -  29618158 G-------T----T----------------
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 7911  3 -     26817 G-------T----T----------------
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                12151  3 +     25043 G-------T----T----------------
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         7607  5 +     21754 --------T----T-T------G------T
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4363379  7 +   7569818 tt------t----c-t------g------t
i Ceratotherium_simum.JH767818.1                        I 3 I 1
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         3134  9 -      9338 T------TT----C-T------G----TGT
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    I 3 I 1
s Cercocebus_atys.KQ010443.1                              6554806  6 +   6739814 g-------t----t-t------g------t
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      26283  6 +     60454 G-------T----T-T------G------T
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          1488  6 -     21101 G-------T----T-T------G------T
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         58798  6 -    107033 G-------T----T-T------G------T
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        1690  6 -     17608 G-------T----T-T------G------T
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          29185  6 +     30494 G-------T----T-T------G------T
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          58031  6 -     59240 G-------T----T-T------G------T
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          1732  6 +     16677 G-------T----T-T------G------T
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           23890  6 +     35983 G-------T----T-T------G------T
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11990418  6 +  12117833 G-------T----T-T------G------T
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46477176  6 +  46592721 G-------T----T-T------G------T
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      40727  6 -     45581 G-------T----T-T------G------T
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       1733  6 +     35577 G-------T----T-T------G------T
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        1509  6 -     25661 G-------T----T-T------G------T
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        1487  6 -     17744 G-------T----T-T------G------T
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        21103  6 +     37128 G-------T----T-T------G------T
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           2312  6 -      6963 T-------T----T-C------G------T
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      I 2 C 0
s Cheirogaleus_major.k141_1157592                           58572 10 -     68416 T-----TTT----T-GTT----G------T
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            7616 10 +     13308 T-----TTT----T-GTT----G------T
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             5168  3 -     18223 G-------T----T----------------
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             22191  3 +     25473 G-------T----T----------------
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           41226  3 +     57117 G-------T----T----------------
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          45905  3 +     54541 G-------T----T----------------
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15961287  3 +  43084221 t-------C----T----------------
i Chinchilla_lanigera.JH721867.1                        C 0 I 9
s Chiropotes_israelita.k141_1189915                         70729  3 +    196370 G-------T----T----------------
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          14909  3 +     40510 G-------T----T----------------
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15138649  6 -  15256731 G-------T----T-T------G------T
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      33696  6 -     53260 G-------T----T-T------G------T
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101144260  6 + 101219884 g-------t----t-t------g------t
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                15993  6 -     21363 T-------T----T-T------G------T
i Choloepus_didactylus.ChoDid_scaffold_36182            I 4 C 0
s Choloepus_hoffmanni.KN194586.1                           761300  6 +    964067 T-------T----T-T------G------T
i Choloepus_hoffmanni.KN194586.1                        I 4 C 0
s Colobus_angolensis.KN985967.1                          10886026  6 +  10971483 g-------t----t-t------g------t
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147664190  6 + 156195979 G-------T----T-T------G------T
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            16175  6 +     23629 G-------T----T-T------G------T
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60612988  9 +  78930452 t-------g-tttt-t------g------c
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         39199  8 -     40477 T-----TAT----T-T------G------T
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     I 3 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 278081 10 -    399297 --------T----T-T------G-AAAGCA
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53028744 10 +  72327488 --------t----t-t------aaaaa-ca
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_88140              1521  2 +     11655 A-------A---------------------
i Crocidura_indochinensis.CroInd_scaffold_88140         C 0 I 7
s Cryptoprocta_ferox.CryFer_flattened_line_19014            51513  7 -     70449 T-------T-T--T-T------A------C
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 3 I 1
s Ctenodactylus_gundi.CteGun_scaffold_447                  207695  6 -    956709 T-------C----T-A------A------A
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                17306  2 +     26546 ----------------------G------T
i Cuniculus_paca.CunPac_flattened_line_16637            I 3 I 9
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 30272  3 -     67205 T-------G----T----------------
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 I 11
s Dasyprocta_punctata.DasPun_flattened_line_634             58389  3 -    236241 T-------C----T----------------
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 I 11
s Dasypus_novemcinctus.JH568778.1                          183186  6 -   6883506 T-------T----T-T------G------T
i Dasypus_novemcinctus.JH568778.1                       I 2 C 0
s Daubentonia_madagascariensis.ctg11                     16844433  8 +  31942871 T-----ATT----T-T------G------T
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80036326  7 -  96802777 t-------t----t-t-----tg------t
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18698305  8 -  18957592 T-----TTT----T-T------G------T
i Desmodus_rotundus.KZ672188.1                          I 3 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 322031  7 +    993696 tt------t----t-t------g------t
i Dicerorhinus_sumatrensis.PEKH010003161.1              I 3 I 1
s Diceros_bicornis.DicBicMic_scaffold_9545                   2681  7 +    151128 T------TT----C-T------G------T
i Diceros_bicornis.DicBicMic_scaffold_9545              I 3 I 1
s Dinomys_branickii.DinBra_scaffold_1996                   156544  3 +    228994 T-------C----T----------------
i Dinomys_branickii.DinBra_scaffold_1996                C 0 I 11
s Dipodomys_ordii.KN672545.1                              3655645  6 +   4240102 t-------t----t-t------a------t
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 27278  6 +     28912 T-------T----T-T------A------T
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                35640  3 -     73477 T-------C----T----------------
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 I 11
s Echinops_telfairi.JH980316.1                           22994700  2 -  44670279 -------------T-T--------------
i Echinops_telfairi.JH980316.1                          I 1 C 0
s Eidolon_helvum.KE772537.1                                 11732  4 +     24177 -------------T-T------G------T
i Eidolon_helvum.KE772537.1                             I 4 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1490981  3 +   1727528 --------t----t-t--------------
i Elaphurus_davidianus.JRFZ01086400.1                   I 8 C 0
s Ellobius_lutescens.LOEQ01003611.1                        239308 11 -    369425 --------t----t-t------gaaaaaaa
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           6422 10 -      7838 --------T----T-T------G-AAAAAA
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85871669  7 +  99434291 t-------c---tt-t------g------t
i Enhydra_lutris.KZ291749.1                             I 3 I 1
s Eptesicus_fuscus.JH977687.1                             4703695  4 +   6522550 tt------t----t----------------
i Eptesicus_fuscus.JH977687.1                           I 3 C 0
s Equus_asinus.JREZ01000062.1                             5852431  6 -   7175178 t-------t----t-t------g------t
i Equus_asinus.JREZ01000062.1                           I 3 I 1
s Equus_caballus.CM000402.2                              13350934  6 +  41866177 t-------t----t-t------g------t
i Equus_caballus.CM000402.2                             I 3 I 1
s Equus_przewalskii.ATBW01073585.1                          12424  6 +     92910 t-------t----t-t------g------t
i Equus_przewalskii.ATBW01073585.1                      I 3 I 1
s Erythrocebus_patas.Contig8                             48770827  6 -  48907691 G-------T----T-T------G------T
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          314532  7 +    330699 T-------T----T-TT-----G------T
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             60986  7 +     89355 T-------T----T-TT-----G------T
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              4626 11 +     13586 --------T----T-TTTGTTTG------T
i Eulemur_albifrons.k141_715837                         I 3 C 0
s Eulemur_collaris.k141_311830                               4571  2 -      6809 ----------------------G------T
i Eulemur_collaris.k141_311830                          I 11 C 0
s Eulemur_coronatus.k141_3240342                            11035 11 +     36558 --------T----T-TTTGTTTG------T
i Eulemur_coronatus.k141_3240342                        I 2 C 0
s Eulemur_flavifrons.k141_903901                             7354 12 +     60246 --------T----TGTTTGTTTG------T
i Eulemur_flavifrons.k141_903901                        I 2 C 0
s Eulemur_fulvus.k141_653297                                10833 11 +    109717 --------T----T-TTTGTTTG------T
i Eulemur_fulvus.k141_653297                            I 2 C 0
s Eulemur_macaco.k141_1341545                               15216 12 +     16540 --------T----TGTTTGTTTG------T
i Eulemur_macaco.k141_1341545                           I 2 C 0
s Eulemur_mongoz.k141_825972                                15488 14 +     27497 T-----TTT----G-TTTGTTTG------T
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           17944 14 +     26808 T-----TTT----G-TTTGTTTG------T
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                32682 12 +     46535 --------T----TGTTTGTTTG------T
i Eulemur_rufus.k141_1620292                            I 3 C 0
s Eulemur_sanfordi.k141_186399                              15405 11 -     29447 --------T----G-TTTGTTTG------T
i Eulemur_sanfordi.k141_186399                          I 4 C 0
s Felis_catus.CM001386.2                                129892468  8 - 159252932 t-------t---tt-t-----tg------t
i Felis_catus.CM001386.2                                I 3 I 1
s Felis_catus_fca126.CM031420.1                         129279537  8 - 158578461 t-------t---tt-t-----tg------t
i Felis_catus_fca126.CM031420.1                         I 3 I 1
s Felis_nigripes.FelNig_flattened_line_8080                 20682  8 +     52776 T-------T-T--T-TT-----G------T
i Felis_nigripes.FelNig_flattened_line_8080             I 3 I 1
s Galago_moholi.ctg555                                     210367  7 -    847004 T-------T----T-T------T-----CT
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           12746  7 -     43889 T-------T----T-T------C-----CT
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           9823  7 +     27357 T-------T----T-T------T-----CT
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               155815  2 +    324696 ----------------------G------T
i Galeopterus_variegatus.GalVar_scaffold_354            I 3 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    180770 11 -    189561 ttccttgtt----t-t--------------
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           12617  6 -     18683 T-------T----T-T------A------T
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               4893  6 -     14630 G-------T----T-T------G------T
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119651992  6 - 195582420 g-------t----t-t------g------t
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   77162  6 +    118900 T-------T----T-T------A------T
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         1406 10 +     10286 T-----TTT----T-TTT----G------T
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_1254239                            9582 10 +      9690 T-----TTT----T-TTT----G------T
i Hapalemur_gilberti.k141_1254239                       C 0 C 0
s Hapalemur_griseus.k141_1387522                             5212 10 +     56096 T-----TTT----T-TTT----G------T
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        28462 10 -     42470 T-----TTT----T-TTT----G------T
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        45085 10 -     54384 T-----TTT----T-TTT----G------T
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              16718  6 +     53719 T-------T----T-T------G------T
i Helogale_parvula.HelPar_flattened_line_22962          I 3 I 1
s Hemitragus_hylocrius.HemHyl_scaffold_16669                26969 11 -     91191 TTCCTTGTT----T-T--------------
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2550625  3 +  31725842 t-------g----t----------------
i Heterocephalus_glaber.JH602058.1                      C 0 I 3
s Heterohyrax_brucei.HetBruBak_scaffold_25354               56972  6 +     73687 T-------T----T-T------G------T
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              146620  7 +    277961 T-------T----T-TT-----G------T
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      277909  6 -    477199 t-------t----t-t------g------t
i Hipposideros_armiger.JXIK01001085.1                   I 3 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              7061  6 -      9143 T-------T----T-T------G------T
i Hipposideros_galeritus.HipGal_scaffold_104691         I 3 C 0
s Hoolock_leuconedys.ctg79                                      4299  6 -   7690867 G-------T----T-T------G------T
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 16795  1 -     67322 -----------------------------T
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 I 1
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           18522  3 -    119109 T-------C----T----------------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 I 11
s Hylobates_abbotti.k141_493872                              4725  6 +      5897 G-------T----T-T------G------T
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_624065                               1589  6 +      2112 G-------T----T-T------G------T
i Hylobates_agilis.k141_624065                          C 0 C 0
s Hylobates_klossii.k141_466549                             11165  6 +     11537 G-------T----T-T------G------T
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14624270  6 -  25970782 G-------T----T-T------G------T
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            1526  6 -      2977 G-------T----T-T------G------T
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     5690  3 +     22540 T-------T----T----------------
i Hystrix_cristata.HysCri_scaffold_50788                C 0 I 11
s Ictidomys_tridecemlineatus.JH393315.1                   7125403  3 +  13083262 t-------t----g----------------
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_4418183                                   1055  7 -      1457 --------T----T-TTT----G------T
i Indri_indri.k141_4418183                              I 2 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               8526  7 +     17520 T-------T----T-TT-----G------T
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8565441  7 +  11848649 tt------t----t-t------a------t
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               23142  7 +     37189 T-------T----T-TT-----G------T
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          49752  3 -    147782 G-------T----T----------------
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   113786  4 -    115756 G------TT----T----------------
i Lasiurus_borealis.LasBor_scaffold_5102                I 3 C 0
s Lemur_catta.scaffold_1                                258406767 10 - 285822530 T-----TTT----T-TTT----G------T
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        23521  7 +     39228 --------T----T-TTT----G------T
i Lepilemur_ankaranensis.k141_884009                    I 1 C 0
s Lepilemur_dorsalis.k141_134267                            52908  7 +     63517 --------T----T-TTT----G------T
i Lepilemur_dorsalis.k141_134267                        I 2 C 0
s Lepilemur_ruficaudatus.k141_617879                        78164  7 +    116806 --------T----T-TTT----G------T
i Lepilemur_ruficaudatus.k141_617879                    I 2 C 0
s Lepilemur_septentrionalis.k141_578524                     31160  7 -     33031 --------T----T-TTT----G------T
i Lepilemur_septentrionalis.k141_578524                 I 1 C 0
s Leptonychotes_weddellii.KB714749.1                      3085478  6 -   3498232 --------c---tt-t------g------t
i Leptonychotes_weddellii.KB714749.1                    I 4 I 1
s Lepus_americanus.LepAme_scaffold_62849                    12805  1 +     22452 -----------------------------T
i Lepus_americanus.LepAme_scaffold_62849                I 1 C 0
s Lipotes_vexillifer.KE558548.1                            135479  7 +   3060487 t-------t----t-t-----tg------t
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19247895  6 +  19376315 G-------T----T-T------G------T
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           10134  5 +     84689 T-------T----T-T------T-------
i Loris_lydekkerianus.k141_550999                       C 0 I 1
s Loris_tardigradus.ctg97                                 3777883  5 +   6799190 T-------T----T-T------T-------
i Loris_tardigradus.ctg97                               C 0 I 1
s Loxodonta_africana.GL010040.1                          20591569  6 -  62548349 T-------T----T-T------G------T
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11087622  7 +  39895028 T-------C-T--g-t------g------t
i Lycaon_pictus.CM007556.1                              I 3 I 1
s Macaca_arctoides.k141_2201161                             19635  6 +     74745 G-------T----T-T------G------T
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12706091  6 +  12821369 G-------T----T-T------G------T
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                1736  6 -      3136 G-------T----T-T------G------T
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           46553  6 +     63263 G-------T----T-T------G------T
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                 1256  6 -      2568 G-------T----T-T------G------T
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 1842  6 -      7381 G-------T----T-T------G------T
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  45060  6 -     79256 G-------T----T-T------G------T
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196035168  6 + 196197964 g-------t----t-t------g------t
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11445336  6 +  11645122 g-------t----t-t------g------t
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   4007  6 -     46448 G-------T----T-T------G------T
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                1679  6 -     13212 G-------T----T-T------G------T
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 15360  6 -     55006 G-------T----T-T------G------T
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43840477  6 +  43892939 G-------T----T-T------G------T
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               16646  6 -     24607 G-------T----T-T------G------T
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               4012  6 -     27140 G-------T----T-T------G------T
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                701105  4 +    802869 -------------T-T------G------T
i Macroglossus_sobrinus.MacSob_scaffold_879             I 4 C 0
s Mandrillus_leucophaeus.scaffold125                     43437054  6 -  43563597 G-------T----T-T------G------T
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4449880  6 -   4543643 G-------T----T-T------G------T
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            145162  7 +    252755 t-------t---GT-T------G------T
i Manis_javanica.JSZB01003966.1                         I 3 I 1
s Manis_pentadactyla.KN017078.1                             35238  7 +     58827 t-------T---GT-T------G------T
i Manis_pentadactyla.KN017078.1                         I 3 I 1
s Marmota_marmota.CZRN01000005.1                         36873245  3 +  64221397 t-------t----t----------------
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       63919  6 -    234502 T-------T----T-T------G------T
i Megaderma_lyra.MegLyr_scaffold_3562                   I 3 C 0
s Mellivora_capensis.MelCap_flattened_line_15433              482  7 -     87323 T-------C-T--T-T------G------T
i Mellivora_capensis.MelCap_flattened_line_15433        I 3 I 1
s Meriones_unguiculatus.MerUng_scaffold_52233               12267 10 +     15977 --------T----T-T------A-GAAGCA
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1046452 10 -  26018355 --------t----t-t------aaaaa-ca
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Microcebus_murinus.CM007691.1                          16509787 10 +  47401472 tt--t---t----t-g----ttg------t
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  31132  4 -     48017 T-------T----T-T--------------
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               22213  7 -     32043 T------TT----T-T------G------T
i Micronycteris_hirsuta.MicHir_scaffold_37978           I 3 C 0
s Microtus_ochrogaster.CM001673.1                        22819609  9 -  98408828 --------T----T-T------G--AAAAA
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8209206  7 +  10048721 T------TT----C-T------G------T
i Miniopterus_natalensis.LDJU01000022.1                 I 3 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            33859  7 +     45743 T------TT----C-T------G------T
i Miniopterus_schreibersii.MinSch_scaffold_24116        I 3 C 0
s Miopithecus_ogouensis.k141_2935907                         1607  6 +     29742 G-------T----T-T------G------T
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        10990  7 -    104932 T-------C-T--T-T------G------T
i Mirounga_angustirostris.MirAng_flattened_line_8852    I 3 I 1
s Mirza_zaza.k141_226143                                     5173 10 +      8497 T-----TTG----T-GTT----G------T
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 145914  7 +    154973 T-------T----T-TT-----G------T
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                160725  7 +    265003 T------TT----T-T------G------T
i Mormoops_blainvillei.MorMeg_scaffold_2952             I 3 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                   515 11 -     19904 TCCCTTGTT----T-T--------------
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  144414  6 -    168139 T-------T----T-T------G------T
i Mungos_mungo.MunMun_flattened_line_8729               I 3 I 1
s Murina_feae.MurFea_scaffold_2254                          19068  4 -    100666 T-----TTT---------------------
i Murina_feae.MurFea_scaffold_2254                      I 3 I 3
s Mus_caroli.LT608236.1                                  70766118 10 +  92629107 --------T----T-T------A-AAAGTA
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75489177 10 +  98207768 --------T----T-T------A-AAAGTA
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67555407 10 +  89017189 --------A----T-T------A-AAAGTA
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74330355 10 +  97876770 --------T----T-T------A-AAAGTA
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             11403  6 +     98495 T-------T----T-T------A------T
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4423849  7 -  28371801 t-------c---tt-t------a------t
i Mustela_putorius.JH417978.1                           I 3 I 1
s Myotis_brandtii.KE161952.1                               967367  3 +   8389877 ---------------T------A------T
i Myotis_brandtii.KE161952.1                            I 5 C 0
s Myotis_davidii.KB114863.1                               5019042  3 +   6462685 ---------------t------a------t
i Myotis_davidii.KB114863.1                             I 5 C 0
s Myotis_lucifugus.GL429887.1                             3464948  3 -   3747815 ---------------T------A------T
i Myotis_lucifugus.GL429887.1                           I 5 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        10162  3 +     66751 ---------------T------A------T
i Myotis_myotis.MyoMyo_scaffold_6123                    I 5 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     89551  3 -    117718 T-------T----T----------------
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 I 11
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             4567  6 -      8794 T-------G----T-T------A------T
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        I 3 C 0
s Nannospalax_galili.KL201303.1                            117968  6 +    362372 t-------t----t-t------t------a
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               8108  6 +     48152 G-------T----T-T------G------T
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4484382  7 -  14209539 t-------c---tt-t------g------t
i Neomonachus_schauinslandi.NINY01007774.1              I 3 I 1
s Neophocaena_asiaeorientalis.KZ688543.1                  3950529  7 -   4490290 t-------t----t-t-----tg------t
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  48825  6 +     94413 T-------T----T-T------G------T
i Noctilio_leporinus.NocLep_scaffold_12062              I 3 C 0
s Nomascus_annamensis.k141_220265                              34  6 +      1763 G-------T----T-T------G------T
i Nomascus_annamensis.k141_220265                       C 0 C 0
s Nomascus_concolor.k141_226614                               827  6 -      5092 G-------T----T-T------G------T
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_642452                            1610  6 +      2851 G-------T----T-T------G------T
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             24545  6 -  18771707 G-------T----T-T------G------T
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  2248  6 +      4512 G-------T----T-T------G------T
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                30427  7 +   3668941 T-------C-T--g-t------g------t
i Nyctereutes_procyonoides.CAJHUB010000786.1            I 3 I 1
s Nycticebus_bengalensis.LG16                            65566569  5 -  95554990 T-------T----T-T------T-------
i Nycticebus_bengalensis.LG16                           I 1 I 1
s Nycticebus_coucang.k141_2051882                            3298  5 +      6470 T-------T----T-T------T-------
i Nycticebus_coucang.k141_2051882                       I 1 I 1
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65668909  5 +  89412551 T-------T----T-T------T-------
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     I 1 I 1
s Ochotona_princeps.JH802095.1                            4995571  6 -  23139505 T-------T----T-T------G------G
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3685099  3 +  10294119 t-------t----t----------------
i Octodon_degus.JH651621.1                              C 0 I 11
s Odobenus_rosmarus.KB229369.1                             679047  7 -   3126709 t-------c---tt-t------c------t
i Odobenus_rosmarus.KB229369.1                          I 39 I 1
s Odocoileus_virginianus.KZ101650.1                       1079204 11 +   1425656 ttccttgtt----t-t--------------
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         36498 11 +     78940 ttccttgtt----t-t--------------
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  124862  9 +    145789 --------T----T-T------G--AAAAA
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  36665 10 +     62360 --------T----T-T------A-AAAACA
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7224211  7 -   7562323 t-------t----t-t-----tg------t
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              43479  6 -     66828 T-------T----T-T------G------T
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141875847  1 + 163896628 -----------------------------t
i Oryctolagus_cuniculus.CM000803.1                      I 1 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      307712  7 -    505867 T-------C-T--g-t------g------t
i Otocyon_megalotis.JAEUCK010005121.1                   I 3 I 1
s Otolemur_crassicaudatus.k141_321880                       38472  7 +     38679 T-------T----T-T------T-----CT
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18007899  7 -  38779656 t-------t----t-t------t-----ct
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134076763 11 - 275406953 ttccttgtt----t-t--------------
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      77977 11 +    140051 TTCCTTGTT----T-T--------------
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127574253  6 - 205426864 g-------t----t-t------g------t
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120151406  6 - 196562556 g-------t----t-t------g------t
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  33836  7 +    295523 T-------T-T--T-T------G------T
i Panthera_onca.PanOnc_flattened_line_1615              I 3 I 1
s Panthera_pardus.KV860323.1                              3637572  7 +  18214204 t-------t---tt-t------g------t
i Panthera_pardus.KV860323.1                            I 3 I 1
s Panthera_tigris.KE721879.1                              5027245  7 -   6340057 t-------t---tt-t------g------t
i Panthera_tigris.KE721879.1                            I 3 I 1
s Pantholops_hodgsonii.KE114631.1                         1065623 11 -   1292953 ttccttgtt----t-t--------------
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188155845  6 - 188283584 g-------t----t-t------g------t
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             4161  6 +      5367 G-------T----T-T------G------T
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47513232  6 +  47705337 G-------T----T-T------G------T
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 67209  6 -    104429 G-------T----T-T------G------T
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    5742  6 +     14967 G-------T----T-T------G------T
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 1602  6 -      7628 G-------T----T-T------G------T
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    115290  7 -    135482 T-------T-T--T-T------G------T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 I 3 I 1
s Perodicticus_ibeanus.k141_117958                           4887  2 -     23713 T-------T---------------------
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            24196  2 -     27972 T-------T---------------------
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      43174  6 -     45160 T-------T----T-T------A------T
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4949899 10 -   8017169 --------t----t-t------aaaaa-ca
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    12035  3 -     36578 T-------G----T----------------
i Petromus_typicus.PetTyp_scaffold_33007                C 0 I 3
s Phocoena_phocoena.PhoPho_flattened_line_11948            120818  7 -    122454 T-------T----T-TT-----G------T
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1987485                           1627  6 -      5908 G-------T----T-T------G------T
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       2251  6 -     17985 G-------T----T-T------G------T
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            1618  6 +      7694 G-------T----T-T------G------T
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26740096  6 +  26888534 g-------t----t-t------g------t
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            96997  2 +    112873 --------T----T----------------
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        I 4 C 0
s Pithecia_albicans.k141_991845                             43230  3 -     61926 G-------T----T----------------
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        24661  3 +     78826 G-------T----T----------------
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              8610  3 -     15800 G-------T----T----------------
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        11808  3 -     16101 G-------T----T----------------
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          5117  3 +      9673 G-------T----T----------------
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13474113  3 -  19735023 G-------T----T----------------
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           13019  3 -     31692 G-------T----T----------------
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           4898  7 +     21690 T-------T----T-TT-----G------T
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       22452  3 +     44506 G-------T----T----------------
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        22664  3 +     67491 G-------T----T----------------
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      12903  3 -     98129 G-------T----T----------------
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     22503  3 +    147771 G-------T----T----------------
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        22758  3 -     23762 G-------T----T----------------
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          3224  3 -     55515 G-------T----T----------------
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         22577  3 +    152463 G-------T----T----------------
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                        294  3 -    119457 G-------T----T----------------
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         12299  3 +    134592 G-------T----T----------------
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          22887  3 -     75465 G-------T----T----------------
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              186779  6 -    373494 g-------t----t-t------g------t
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19807427  6 +  19899266 G-------T----T-T------G------T
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               5353  6 -     15069 G-------T----T-T------A------C
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              5487  6 +     14865 G-------T----T-T------A------C
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                76836  6 +     78963 T-------T----T-T------G------T
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6848148 10 +  12164890 tt--t---t----t-t----ttg------t
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coronatus.k141_1353159                         3210  9 +     11805 T-----TTT----T-TT-----G------T
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           42547  9 +     52369 T-----TTT----T-TT-----G------T
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         34935  9 -     44753 T-----TTT----T-TT-----G------T
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            16857  9 +     27322 T-----TTT----T-TT-----G------T
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       16492  9 -     53241 T-----TTT----T-TT-----G------T
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         38763  9 -     48185 T-----TTT----T-TT-----G------T
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           33819 10 +     77221 --------t----t-t------ata-AGCA
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            3383  7 -     27784 tt------t----t-t------g------t
i Pteronotus_parnellii.KE867983.1                       I 3 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        246157  7 -    344369 T-------C-T--T-T------G------T
i Pteronura_brasiliensis.PteBra_flattened_line_1343     I 3 I 1
s Pteropus_alecto.KB031157.1                             13245487  4 -  17261082 -------------t-t------g------t
i Pteropus_alecto.KB031157.1                            I 4 C 0
s Pteropus_vampyrus.KN525959.1                             603442  4 -   3946241 -------------t-t------g------t
i Pteropus_vampyrus.KN525959.1                          I 4 C 0
s Puma_concolor.QAVW01000427.1                          131533830  7 - 161321710 t-------t---tt-t------g------t
i Puma_concolor.QAVW01000427.1                          I 3 I 1
s Pygathrix_cinerea.k141_374971                             29471  6 +     56732 G-------T----T-T------G------T
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6805962  6 +   6970761 G-------T----T-T------G------T
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             5356  6 +     18040 G-------T----T-T------G------T
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                15281 11 +     68503 TTCCTTGTT----T-T--------------
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13915118 10 +  90463843 --------t----t-t------aaaa-gta
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1787321  6 +   2252614 T-------T----T-T------G------T
i Rhinolophus_sinicus.LVEH01000179.1                    I 3 C 0
s Rhinopithecus_bieti.k119_1391695                           1584  6 -      1866 G-------T----T-T------G------T
i Rhinopithecus_bieti.k119_1391695                      C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206377241  6 - 206558726 g-------t----t-t------g------t
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44856141  6 -  45163003 G-------T----T-T------G------T
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                18811  4 +    109198 -------------T-T------G------T
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            I 4 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       7443 11 +     12214 TTCCTTGTT----T-T--------------
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15672318  3 -  43202129 g-------t----t----------------
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        4235  3 +     34089 G-------T----T----------------
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              4176  3 -     60842 G-------T----T----------------
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              4271  3 +     67014 G-------T----T----------------
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              4249  3 +     60816 G-------T----T----------------
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 4186  3 -     76454 G-------T----T----------------
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17340911  3 -  30362882 G-------T----T----------------
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         20270  3 -     62485 G-------T----T----------------
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   31801 10 -    114521 A-------ACTTTT-T------G------T
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        2968  6 +     15331 G-------T----T-T------G------T
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       8365  6 +     20762 G-------T----T-T------G------T
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         118367  6 +    130994 G-------T----T-T------G------T
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           37154  6 +     46263 G-------T----T-T------G------T
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     30268  6 +     42640 G-------T----T-T------G------T
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        13312  6 +     30600 G-------T----T-T------G------T
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   99854 10 -    120886 --------T----T-T------A-AAAATA
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            18381  6 +    739146 A-------A----T-T------G------C
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2239321  3 +   2842873 t-------t----g----------------
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             234279  7 -    276980 C-------C-T--T-T------G------T
i Spilogale_gracilis.SpiGra_flattened_line_905          I 3 I 1
s Suricata_suricatta.SurSur_flattened_line_20339            27096  6 +     62062 T-------T----T-T------G------T
i Suricata_suricatta.SurSur_flattened_line_20339        I 3 I 1
s Sus_scrofa.CM000824.4                                 189271365  6 + 218635234 c-------T----T-T------G------T
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        14527  6 -  13920577 G-------T----T-T------G------T
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               5548  7 -      6213 T------TT----T-T------G------C
i Tadarida_brasiliensis.TadBra_scaffold_145589          I 3 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               14226  4 +     45698 -------------T-T------A------T
i Tamandua_tetradactyla.TamTet_scaffold_26877           I 3 C 0
s Tapirus_indicus.TapInd_scaffold_176                      806392  5 +   1148477 --------C----T-T------G------T
i Tapirus_indicus.TapInd_scaffold_176                   I 3 I 1
s Tapirus_terrestris.TapTer_scaffold_14939                  57083  5 +     99546 --------T----T-T------G------T
i Tapirus_terrestris.TapTer_scaffold_14939              I 3 I 1
s Tarsius_lariang.k141_609102                               26055  5 +     42269 --------T----T-T------G------T
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               59371  5 +     65473 --------T----T-T------G------T
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194007372  6 - 194193292 g-------t----t-t------g------t
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             38859  3 -     47444 T-------G----T----------------
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 I 3
s Tolypeutes_matacus.TolMat_scaffold_269431                  5058  8 +      6782 T-----TTT----T-T------G------T
i Tolypeutes_matacus.TolMat_scaffold_269431             I 2 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  135384  7 -    259118 T------TT----T-T------G------T
i Tonatia_saurophila.TonSau_scaffold_3334               I 3 C 0
s Trachypithecus_auratus.k141_738098                        26472  6 +     38948 G-------T----T-T------G------T
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   20202  6 -     32910 G-------T----T-T------G------T
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      1589  6 -     12939 G-------T----T-T------G------T
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       1524  6 -     14244 G-------T----T-T------G------T
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           42922  6 -     54611 G-------T----T-T------G------T
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                         728  6 -     11566 G-------T----T-T------G------T
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     2900  6 -     15592 G-------T----T-T------G------T
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          1557  6 +     14371 G-------T----T-T------G------T
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  51309  6 +     51589 G-------T----T-T------G------T
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       14490  6 +     14732 G-------T----T-T------G------T
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       4962  6 -     28054 G-------T----T-T------G------T
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44659762  6 -  44834318 G-------T----T-T------A------T
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       2065  6 +     13828 G-------T----T-T------G------T
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   4674  4 +     90398 T-------T----T-T--------------
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16082019  6 +  31416278 T-------T----T-T------G------T
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2792428  4 -   3938065 -------------T-T------G------T
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    4633  4 +     13056 -------------T-T------G------T
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69312928  7 -  96451834 t-------t----t-t-----tg------t
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                    812 10 +     10241 A-------AATTTT-C------A------T
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6514295  7 +  28682327 C-------c---ta-t------g------t
i Ursus_maritimus.KK498671.1                            I 3 I 1
s Varecia_rubra.k141_432109                                  4848 10 -     20643 T-----TTT----T-TTT----G------T
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             24389 10 -     33872 T-----TTT----T-TTT----G------T
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1524171  6 -   2331223 t-------a----t-t------g------t
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                137805  7 -    281493 T-------C-T--G-T------G------T
i Vulpes_lagopus.VulLag_flattened_line_2045             I 3 I 1
s Xerus_inauris.XerIna_scaffold_7898                       126433  3 -    134049 T-------T----T----------------
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        213773  7 -    227762 T-------C-T--T-T------G------T
i Zalophus_californianus.ZalCal_flattened_line_4097     I 3 I 1
s Zapus_hudsonius.ZapHud_scaffold_64392                     14521  6 -     20485 T-------T----T-C------A------T
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           6425  2 -      8775 ----------------------G------T
i Ziphius_cavirostris.ZipCav_flattened_line_127025      I 2 C 0
e Sorex_araneus.JH798170.1                               17750754 3364 -  27805282 I
e Erinaceus_europaeus.JH835290.1                         11531598 1064 +  16010500 I
e Elephantulus_edwardii.JH947210.1                        7804622 10712 +  15467074 I
e Hylobates_pileatus_a.tarseq_592                             33341 34 -     60944 I
e Propithecus_coquerelli.NW_012147997.1                    667273 6500 -   2312742 I
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I
e Cavia_aperea.AVPZ01000278.1                            15786075 94 -  24422027 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               11383 21 +    209709 TTTAT-ACTT-TT---CCACCT-C-------T-T-----A
s Acinonyx_jubatus.LLWD01000356.1                         2033500 20 +   3721120 tttac-actt-tT---CCGTGT-C-------C-A------
i Acinonyx_jubatus.LLWD01000356.1                       I 1 I 2
s Acomys_cahirinus.AcoCah_scaffold_1625                    112135 24 -    189883 CCTAT-GC-CTGG---CTACAT-T-------A-A-ATT-A
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10656814 20 +  23371972 TTTAA-ACTT-CT---CCATGT-C-------C-A------
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 1 I 3
s Ailurus_fulgens.LNAC01000003.1                          7094158 20 -  16596857 tttat-actt-tt---ccagGT-C-------C-A------
i Ailurus_fulgens.LNAC01000003.1                        I 1 I 3
s Allactaga_bullata.AllBul_scaffold_70162                   16438 24 -     22067 TTTGT-GATT-TT---CTATAT-T-------T-A--TTCA
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                    869 19 -     60446 TTTAT-ACTT-TT---C--CTT-C-------T-T-----A
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         1590 21 -     29318 TTTAT-ACTT-TT---CCACTT-C-------T-T-----A
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                          525 21 +     38766 TTTAT-ACTT-TT---CCACTT-C-------T-T-----A
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          1484 21 -     80423 TTTAT-ACTT-TT---CCACTT-C-------T-T-----A
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             9778 20 -     18050 -TTAT-ACTT-TT---ATATGT-C-------T-T-----A
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                 10871 20 -     11521 -TTAT-ACTT-TT---CCATGT-C-------T-T-----A
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                             10455 20 -     21359 -TTAT-ACTT-TT---ATATGT-C-------T-T-----A
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                  70 20 +      2129 -TTAT-ACTT-TT---CCATGT-C-------T-T-----A
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          9754 20 -     10438 -TTAT-ACTT-TT---CCATGT-C-------T-T-----A
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            6410 20 +      7047 -TTAT-ACTT-TT---CCATGT-C-------T-T-----A
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             9690 20 +     10410 -TTAT-ACTT-TT---CCATGT-C-------T-T-----A
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            3498 20 -      4927 -TTAT-ACTT-TT---CCATGT-C-------T-T-----A
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_990213                             6427  2 +      6429 -TT-------------------------------------
i Alouatta_seniculus.k141_990213                        C 0 N 0
s Ammotragus_lervia.NIVO01013474.1                        3519632 23 +   4113121 -taaa-actt-tt---ccataT-C-------T-C-CTT-A
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      389837 24 -    631301 CTCGT-GCTT-TT---CCATAT-C-------T-A-CTT-A
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            30215 23 +     33004 -TAAT-GCTT-TT---CCACAT-C-------C-C-CTT-A
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 62141 20 +     78111 -TTAT-ACTT-TT---CCATGT-C-------T-T-----A
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            5082 20 +     22701 -TTAT-ACTT-TT---CCATGT-C-------T-T-----A
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5749039 20 +   9889416 -ttat-actt-tt---ccatGT-C-------T-T-----A
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             5626 20 -    104377 -TTAT-ACTT-TT---CCATGT-C-------T-T-----A
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               5628 20 +     23246 -TTAT-ACTT-TT---CCATGT-C-------T-T-----A
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     3253 24 +      5067 TTTAA-CCCT-TT---CCATGT-C-------T-AG-GT-A
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_587554                         493 22 +      9265 --AAT-GTTC-TT---CCATGT-C-------t-t-gtt-a
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 8248 24 -     29036 TTCAT-GCTT-TT---TCATAT-C-------C-A-CTT-A
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9538887 20 +  39197703 -TTAT-AATT-TT---CCATGT-C-------T-T-----A
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             60158 20 +     85812 -TTAT-AATT-TT---CCATGT-C-------T-T-----A
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                11170 20 +     89302 -TTAT-AATT-TT---CCATGT-C-------T-T-----A
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             15675 20 -     58268 -TTAT-AATT-TT---CCATGT-C-------T-T-----A
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             63666 20 +    119057 -TTAT-AATT-TT---CCATGT-C-------T-T-----A
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               5635 20 -     25888 -TTAT-AATT-TT---CCATAT-C-------T-T-----A
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 6296 24 -     16375 TTCAT-GCTT-TT---CCATGT-C-T-T-G-T-T-----A
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              2616 24 +      2719 TTCAT-GCTT-TT---CCATGT-C-T-T-G-T-T-----A
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26379655 24 +  51448160 ttcaT-GCTT-TT---CCACAT-C-------C-A-CTT-A
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        4886 24 -     13118 ttcaT-GCTT-TT---CCACAT-C-------C-A-CTT-A
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   42695 23 -     72089 -TAAA-ACTT-TT---CCACAT-C-------T-C-CTT-A
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6559370 23 +   6870073 -TAGT-GCTT-TT---CCACAT-C-------C-C-CTT-A
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138139474 23 - 161108492 -TAAT-GCTT-TT---CCACAT-C-------C-C-CTT-A
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     572011 23 -    998990 -TAAT-GCTT-TT---CCACAT-C-------C-C-CTT-A
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136295207 23 - 158972876 -TAAT-GCTT-TT---CCACAT-C-------C-C-CTT-A
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1232290 23 -   1914593 -TAAT-GCTT-TT---CCACAT-C-------C-C-CTT-A
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               113525 20 -    171031 -TTAT-ACTT-TT---CCACAT-C-------T-T-----A
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 12556 20 +    125063 -TTAT-ACTT-TT---CCACAT-C-------T-T-----A
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                14601 20 -    216513 -TTAT-ACTT-TT---CCACAT-C-------T-T-----A
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        7141 20 -    134917 -TTAT-ACTT-TT---CCACAT-C-------T-T-----A
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3219073 24 -   8989139 tttat-gcTT-TC---CCAAGC-C-------C-A-CTT-A
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           396775 24 -  15254737 tttat-gcTT-TC---CCAAGC-C-------C-A-CTT-A
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2972510 24 +   6889770 tttat-gcTT-TC---CCAAGC-C-------C-A-CTT-A
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11518973 20 +  39901454 TTTAT-ACTT-TT---CCATGT-T-------C-A------
i CanFam4.chr31                                         I 1 I 3
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   13998 20 +     87036 TTTAT-ACTT-TT---CCATGT-T-------C-A------
i Canis_lupus_VD.CanFam_VD_scaffold_16982               I 1 I 3
s Canis_lupus_dingo.QKWQ01001993.1                       11265640 20 -  35597290 tttat-actt-tt---ccatGT-T-------C-A------
i Canis_lupus_dingo.QKWQ01001993.1                      I 1 I 3
s Canis_lupus_familiaris.chr31                           11088174 20 +  39895921 tttat-actt-tt---ccatGT-T-------C-A------
i Canis_lupus_familiaris.chr31                          I 1 I 3
s Canis_lupus_orion.HG994411.1                           16455189 20 -  44759192 tttat-actt-tt---ccatGT-T-------C-A------
i Canis_lupus_orion.HG994411.1                          I 1 I 3
s Capra_aegagrus.CM003214.1                              21324708 23 + 157394656 -tgaa-aCTT-TT---CCATAT-C-------T-C-CTT-A
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135705935 23 - 157403528 -tgaa-aCTT-TT---CCATAT-C-------T-C-CTT-A
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          308578 24 +    345090 tttgt-gttt-tt---tcatgT-C-------T-TG-CT-A
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               59041 24 +     67245 TTCAT-GTTT-TT---TCATAC-C-------C-A-CTT-A
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   30256 24 +     33760 TTTAT-GATT-TT---CTATAT-A-------T-AGA-C-A
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   158382 24 -    276539 TCTAT-GCTT-TT---CCACAT-T-------C-A-CTT-A
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_porcellus.DS562889.1                             15798072 15 -  24440124 ------------C---CTATGT-C-------TAG-A-TAA
i Cavia_porcellus.DS562889.1                            I 11 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       176263 15 +    436027 ------------C---CTATGT-C-------TAG-A-TAA
i Cavia_tschudii.CavTsc_scaffold_488                    I 11 C 0
s Cebus_albifrons.Contig22                               18890370 20 -  29618158 -TTAT-ACTT-TT---CCATAT-C-------T-T-----A
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 7914 20 -     26817 -TTAT-ACTT-TT---CCATAT-C-------T-T-----A
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                12154 20 +     25043 -TTAT-ACTT-TT---CCATAT-C-------T-T-----A
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         7612 24 +     21754 TTTAT-GTTT-TT---TCATGT-C-------T-T-ACT-A
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4363387 20 +   7569818 tttat-ggtt-TT---CCATGT-T-------C-A------
i Ceratotherium_simum.JH767818.1                        I 1 I 3
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         3144 20 -      9338 TTTAT-GGTT-TT---CCATGT-T-------C-A------
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    I 1 I 3
s Cercocebus_atys.KQ010443.1                              6554812 21 +   6739814 tttat-actt-tt---ccacTT-C-------T-T-----A
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      26289 21 +     60454 TTTAT-ACTT-TT---CCACTT-C-------T-T-----A
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          1494 21 -     21101 TTTAT-ACTT-TT---CCACTT-C-------T-T-----A
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         58804 21 -    107033 TTTAT-ACTT-TT---CCACTT-C-------T-T-----A
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        1696 21 -     17608 TTTAT-ACTT-TT---CCACTT-C-------T-T-----A
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          29191 21 +     30494 TTTGT-ACTT-TT---CCACTT-C-------T-T-----A
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          58037 21 -     59240 TTTAT-ACTT-TT---CCACTT-C-------T-T-----A
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          1738 21 +     16677 TTTAT-ACTT-TT---CCACTT-C-------T-T-----A
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           23896 21 +     35983 TTTAT-ACTT-TT---CCACTT-C-------T-T-----A
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11990424 21 +  12117833 TTTAT-ACTT-TT---CCACTT-C-------T-T-----A
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46477182 21 +  46592721 TTTAT-ACTT-TT---CCACTT-C-------T-T-----A
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      40733 21 -     45581 TTTAT-ACTT-TT---CCACTT-C-------T-T-----A
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       1739 21 +     35577 TTTAT-ACTT-TT---CCACTT-C-------T-T-----A
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        1515 21 -     25661 TTTAT-ACTT-TT---CCACTT-C-------T-T-----A
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        1493 21 -     17744 TTTAT-ACTT-TT---CCACTT-C-------T-T-----A
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        21109 21 +     37128 TTTAT-ACTT-TT---CCACTT-C-------T-T-----A
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           2318 24 -      6963 TATAT-CCTT-TT---CCTTGT-C-------C-A-CTT-A
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           58582 24 -     68416 TTCAT-GCTT-TT---CTATGT-C-T-T-G-T-T-----A
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            7626 24 +     13308 TTCAT-GCTT-TT---CTATGT-C-T-T-G-T-T-----A
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             5171 20 -     18223 -TTAT-ACTT-TT---CCAGGT-C-------T-T-----A
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             22194 20 +     25473 -TTAT-ACTT-TT---CCAGGT-C-------T-T-----A
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           41229 20 +     57117 -TTAT-ACTT-TT---CCAGGT-C-------T-T-----A
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          45908 20 +     54541 -TTAT-ACTT-TT---CCAGGT-C-------T-T-----A
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15961299 15 +  43084221 ------------T---CAGTGT-C-------TAAGTA--A
i Chinchilla_lanigera.JH721867.1                        I 9 C 0
s Chiropotes_israelita.k141_1189915                         70732 20 +    196370 -TTAT-ACTT-TT---CCACGT-C-------T-T-----A
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          14912 20 +     40510 -TTAT-ACTT-TT---CCACGT-C-------T-T-----A
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15138655 21 -  15256731 TTTAT-ACTT-TT---CCACTT-C-------T-T-----A
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      33702 21 -     53260 TTTAT-ACTT-TT---CCACTT-C-------T-T-----A
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101144266 21 + 101219884 tttat-actt-tt---ccacTT-C-------T-T-----A
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                15999 25 -     21363 TACTTGGCTT-TT---CTATGT-C-------C-A-CTT-A
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           761306 25 +    964067 TACTTGGCTT-TT---CTATGT-C-------C-A-CTT-A
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10886032 21 +  10971483 tttat-actt-tt---ccacCT-C-------T-T-----G
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147664196 21 + 156195979 TTTAT-ACTT-TT---CCACCT-C-------T-T-----G
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            16181 21 +     23629 TTTAT-ATTT-TT---CCACCT-C-------T-T-----G
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60612997 22 +  78930452 ttt---gttt-tg---ccaTTT-C-------C-A-CTT-A
i Condylura_cristata.JH655880.1                         C 0 I 137
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         39207 24 -     40477 TTTAG-GCTT-TG---CCATAT-C-------C-T-TTT-A
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 278091 23 -    399297 TCTAT-GA-T-GG---CTACAT-T-------A-A-ATT-A
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53028754 24 +  72327488 tctat-GC-CTGT---CCACAT-G-------A-A-A-TCA
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            51521 18 -     70449 TTTAT-ACTT-TC---CCATGT-C----------------
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 1 I 3
s Ctenodactylus_gundi.CteGun_scaffold_447                  207701 25 -    956709 TTTAT-ACTT-TT---TCATGC-C-------TGAGTA--A
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 30286 15 -     67205 ------------C---CCATGT-C-------TACG-TT-A
i Ctenomys_sociabilis.CteSoc_scaffold_19489             I 11 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                17317 15 +     26546 ------------C---CAATGT-C-------TAGGTA--A
i Cuniculus_paca.CunPac_flattened_line_16637            I 9 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             58403 15 -    236241 ------------C---CCATGT-C-------TAG-A-TAA
i Dasyprocta_punctata.DasPun_flattened_line_634         I 11 C 0
s Dasypus_novemcinctus.JH568778.1                          183192 24 -   6883506 TATAT-GCTT-TT---CCTTGG-C-------C-A-CTT-A
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16844441 24 +  31942871 TTCCT-GCTT-TT---CCATGT-C-------C-TG--TCA
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80036333 24 -  96802777 ttcaT-GCTT-TT---CCACAT-C-------C-A-CTT-A
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18698313 24 -  18957592 TACAT-GCTT-TT---CCATAT-C-------C-A--TTGA
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 322039 20 +    993696 tttac-ggTT-TT---CCATAT-T-------C-A------
i Dicerorhinus_sumatrensis.PEKH010003161.1              I 1 I 3
s Diceros_bicornis.DicBicMic_scaffold_9545                   2689 20 +    151128 TTTAT-GGTT-TT---CCATGT-T-------C-A------
i Diceros_bicornis.DicBicMic_scaffold_9545              I 1 I 3
s Dinomys_branickii.DinBra_scaffold_1996                   156558 15 +    228994 ------------T---CCCTAT-C-------TAGGTA--A
i Dinomys_branickii.DinBra_scaffold_1996                I 11 C 0
s Dipodomys_ordii.KN672545.1                              3655651 22 +   4240102 cTTAT-AATT-TT---CTG--T-T-------G-AGA-G-A
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 27284 22 +     28912 CTTAT-AATT-TT---CTG--T-T-------T-AGA-G-A
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                35654 15 -     73477 ------------C---CCATGT-C-------TAG-A-TAA
i Dolichotis_patagonum.DolPat_scaffold_14102            I 11 C 0
s Echinops_telfairi.JH980316.1                           22994702 21 -  44670279 ---GT-GTTA-CT---TCATGT-C-------C-A-CTT-A
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 11736 24 +     24177 GTCAT-GTTT-TT---CCATGT-C-------C-A-CTT-A
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1490984 23 +   1727528 -taat-gctt-tt---ccaCAT-C-------C-C-CTT-A
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        239319 24 -    369425 tctag-GC-ATAT---CCACAT-T-------A-A-A-TCA
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           6432 24 -      7838 TCCAT-GC-ATAT---CCACAT-T-------A-A-A-TCA
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85871677 20 +  99434291 tttat-actt-tt---ctgtgt-c-------C-A------
i Enhydra_lutris.KZ291749.1                             I 1 I 3
s Eptesicus_fuscus.JH977687.1                             4703699 11 +   6522550 ------------t---at---t-t-------c-a-ctg-a
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5852438 20 -   7175178 tttat-gcgT-TT---CTATGT-C-------C-A------
i Equus_asinus.JREZ01000062.1                           I 1 I 3
s Equus_caballus.CM000402.2                              13350941 20 +  41866177 tttat-gcgT-TT---CTATGT-C-------C-A------
i Equus_caballus.CM000402.2                             I 1 I 3
s Equus_przewalskii.ATBW01073585.1                          12431 20 +     92910 tttat-gcgT-TT---CTATGT-C-------C-A------
i Equus_przewalskii.ATBW01073585.1                      I 1 I 3
s Erythrocebus_patas.Contig8                             48770833 21 -  48907691 TTTAT-ACTT-TT---CCACTT-C-------T-T-----A
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          314539 24 +    330699 TTCAT-GCTT-TT---CCACAT-C-------C-A-TTT-A
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             60993 24 +     89355 TTCAT-GCTT-TT---CCACAT-C-------C-A-CTT-A
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              4637 21 +     13586 TTCAT-GCTT-TG---CCATGT-C-------T-T-----A
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               4573 21 -      6809 TTCAT-GCTT-TG---CCATGT-C-------T-T-----A
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            11046 21 +     36558 TTCAT-GCTT-TT---CCATGT-C-------T-T-----A
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             7366 21 +     60246 TTCAT-GCTT-TT---CCATGT-C-------T-T-----A
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                10844 21 +    109717 TTCAT-GCTT-TG---CCATGT-C-------T-T-----A
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               15228 21 +     16540 TTCAT-GCTT-TT---CCATGT-C-------T-T-----A
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                15502 21 +     27497 TTCAT-GCTT-TT---CCATGT-C-------T-T-----A
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           17958 21 +     26808 TTCAT-GCTT-TT---CCATGT-C-------T-T-----A
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                32694 21 +     46535 TTCAT-GCTT-TT---CCATGT-C-------T-T-----A
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              15416 21 -     29447 TTCAT-GCTT-TT---CCATGT-C-------T-T-----A
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129892477 20 - 159252932 tttac-actt-tT---CCATGT-C-------C-A------
i Felis_catus.CM001386.2                                I 1 I 2
s Felis_catus_fca126.CM031420.1                         129279546 20 - 158578461 tttac-actt-tT---CCGTGT-C-------C-A------
i Felis_catus_fca126.CM031420.1                         I 1 I 2
s Felis_nigripes.FelNig_flattened_line_8080                 20691 20 +     52776 TTTAC-ACTT-TT---CCGTGT-C-------C-A------
i Felis_nigripes.FelNig_flattened_line_8080             I 1 I 2
s Galago_moholi.ctg555                                     210374 24 -    847004 TCCAT-GATC-TT---CCATGT-C-------T-TG--TCA
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           12753 24 -     43889 TCCAT-GATC-TT---CCATGT-C-------T-TG--TCA
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           9830 24 +     27357 TCCAT-GCTC-TT---CTATGC-C-------T-TG--TCA
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               155817 24 +    324696 TTTAT-GCTT-TT---CCTTGT-C-------T-A-TTT-A
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    180781 23 -    189561 -taat-gCTT-TT---CCACAT-T-------C-C-CTT-A
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           12623 24 -     18683 TTGAA-GCTT-TT---CCATGT-C-------T-AG-TT-A
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               4899 21 -     14630 TTTAT-ACTT-TT---CCACCT-C-------T-T-----A
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119651998 21 - 195582420 tttat-actt-tt---ccaCCT-C-------T-T-----A
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   77168 24 +    118900 TTTAA-GCTT-TT---CCATGT-C-------T-AG-TT-A
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         1416 21 +     10286 TTCAT-GCTT-TT---CCATGT-C-------T-T-----A
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_1254239                            9592 21 +      9690 TTCAT-GCTT-TT---CCATGT-C-------T-T-----A
i Hapalemur_gilberti.k141_1254239                       C 0 C 0
s Hapalemur_griseus.k141_1387522                             5222 21 +     56096 TTCAT-GCTT-TT---CCATGT-C-------T-T-----A
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        28472 21 -     42470 TTCAT-GCTT-TT---CCATGT-C-------T-T-----A
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        45095 21 -     54384 TTCAT-GCTT-TT---CCATGT-C-------T-T-----A
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              16725 20 +     53719 TTTAT-ACTT-TT---CCATGT-C-------C-G------
i Helogale_parvula.HelPar_flattened_line_22962          I 1 I 2
s Hemitragus_hylocrius.HemHyl_scaffold_16669                26980 23 -     91191 -TGAA-ACTT-TT---CCATAT-C-------T-C-CTT-A
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2550631 18 +  31725842 ------------CTTCCCATGT-C-------AAGGTA--A
i Heterocephalus_glaber.JH602058.1                      I 3 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               56978 25 +     73687 TATGC-ATTG-TT---TCACTCTC-------C-A-TGT-A
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              146627 24 +    277961 TTTAT-GCTT-TT---CCACAT-C-------C-AG-TT-A
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      277915 19 -    477199 tTCGT-GCTT-TT---CCATGT-C-------C--------
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              7067 19 -      9143 TTCAT-GCTT-TT---CCATGT-C-------C--------
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      4305 21 -   7690867 TTTAT-ACTT-TT---CCACCT-C-------T-T-----A
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 16797 20 -     67322 AAAAT-ATTT-TT---CCATGT-C-------C-C------
i Hyaena_hyaena.HyaHya_flattened_line_20729             I 1 I 2
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           18536 15 -    119109 ------------C---CCATGT-C-------TAG-A-TAA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       I 11 C 0
s Hylobates_abbotti.k141_493872                              4731 21 +      5897 TTTAT-ACTT-TT---CCACCT-C-------T-T-----A
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_624065                               1595 21 +      2112 TTTAT-ACTT-TT---CCACCT-C-------T-T-----A
i Hylobates_agilis.k141_624065                          C 0 C 0
s Hylobates_klossii.k141_466549                             11171 21 +     11537 TTTAT-ACTT-TT---CCACCT-C-------T-T-----A
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14624276 21 -  25970782 TTTAT-ACTT-TT---CCACCT-C-------T-T-----A
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            1532 21 -      2977 TTTAT-ACTT-TT---CCACCT-C-------T-T-----A
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     5704 15 +     22540 ------------C---CCATAT-C-------TAGGTA--A
i Hystrix_cristata.HysCri_scaffold_50788                I 11 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7125406 22 +  13083262 --taa-GCTG-TC---CCATGT-C-------T-AG-TT-A
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_4418183                                   1062 24 -      1457 TTCAT-GCTT-TC---CCATGT-C-------T-TG-TT-A
i Indri_indri.k141_4418183                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               8533 24 +     17520 TTCAT-GCTT-TT---CCACAT-C-------C-A-CTT-A
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8565448 24 +  11848649 tttgt-gatt-tt---ctaTAT-T-------T-AG--TCA
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               23149 24 +     37189 TTCAT-GCTT-TT---CCACAT-C-------C-A-CTT-A
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          49755 20 -    147782 -TTAT-ACTT-TC---CCATGT-C-------T-T-----A
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   113790 11 -    115756 ------------T---AT---T-T-------C-A-CTT-A
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258406777 21 - 285822530 TTCAT-GCTT-TT---CCATGT-C-------T-T-----A
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        23528 24 +     39228 TTCAT-GCTT-TT---CCATGT-C-T-T-G-T-T-----A
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            52915 24 +     63517 TTCAT-GCTT-TT---CCATGT-C-T-T-G-T-T-----A
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        78171 24 +    116806 TTCAT-GCTT-TG---CCATGT-C-T-T-G-T-T-----A
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     31167 24 -     33031 TTCAT-GCTT-TT---CCATGT-C-T-T-G-T-T-----A
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3085485 20 -   3498232 tttat-actt-tt---ccatGT-C-------C-A------
i Leptonychotes_weddellii.KB714749.1                    I 1 I 3
s Lepus_americanus.LepAme_scaffold_62849                    12806 24 +     22452 TTTAT-GTTT-TT---TCTTGT-C-------T-AG--TGA
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            135486 24 +   3060487 ttcaT-GCTT-TT---CCACAT-C-------C-A-CTT-A
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19247901 18 +  19376315 TTTAT-ACTT-TT---CCA----C-------T-T-----A
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           10140 21 +     84689 ---AT-GCTC-TT---CCATGT-C-------T-TG-TT-A
i Loris_lydekkerianus.k141_550999                       I 1 C 0
s Loris_tardigradus.ctg97                                 3777889 21 +   6799190 ---AT-GCTC-TT---CCATGT-C-------T-TG-TT-A
i Loris_tardigradus.ctg97                               I 1 C 0
s Loxodonta_africana.GL010040.1                          20591575 24 -  62548349 TATGT-GTTG-CT---TCATGT-C-------C-A--CTGA
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11087630 20 +  39895028 tttat-actt-tt---ccatGT-T-------C-A------
i Lycaon_pictus.CM007556.1                              I 1 I 3
s Macaca_arctoides.k141_2201161                             19641 21 +     74745 TTTAT-ACTT-TT---CCACTT-C-------T-T-----A
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12706097 21 +  12821369 TTTAT-ACTT-TT---CCACTT-C-------T-T-----A
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                1742 21 -      3136 TTTAT-ACTT-TT---CCACTT-C-------T-T-----A
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           46559 21 +     63263 TTTAT-ACTT-TT---CCACTT-C-------T-T-----A
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                 1262 21 -      2568 TTTAT-ACTT-TC---CCACTT-C-------T-T-----A
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 1848 21 -      7381 TTTAT-ACTT-TT---CCACTT-C-------T-T-----A
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  45066 21 -     79256 TTTAT-ACTT-TT---CCACTT-C-------T-T-----A
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196035174 21 + 196197964 tttat-actt-tt---ccaCTT-C-------T-T-----A
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11445342 21 +  11645122 tttat-actt-tt---ccacTT-C-------T-T-----A
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   4013 21 -     46448 TTTAT-ACTT-TT---CCACTT-C-------T-T-----A
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                1685 21 -     13212 TTTAT-ACTT-TT---CCACTT-C-------T-T-----A
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 15366 21 -     55006 TTTAT-ACTT-TT---CCACTT-C-------T-T-----A
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43840483 21 +  43892939 TTTAT-ACTT-TT---CCACTT-C-------T-T-----A
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               16652 21 -     24607 TTTAT-ACTT-TT---CCACTT-C-------T-T-----A
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               4018 21 -     27140 TTTAT-ACTT-TT---CCACTT-C-------T-T-----A
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                701109 24 +    802869 TTCAT-GTTT-TT---CCATGT-C-------C-A-CTT-A
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43437060 21 -  43563597 TTTAT-ACTT-TT---CCACTT-C-------T-T-----A
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4449886 21 -   4543643 TTTAT-ACTT-TT---CCACTT-C-------T-T-----A
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            145170 19 +    252755 TTAAT-GCTT-TT----CATGT-C-------C-A------
i Manis_javanica.JSZB01003966.1                         I 1 I 3
s Manis_pentadactyla.KN017078.1                             35246 20 +     58827 TTAAT-GCTT-TT---CCATGT-C-------C-A------
i Manis_pentadactyla.KN017078.1                         I 1 I 3
s Marmota_marmota.CZRN01000005.1                         36873248 22 +  64221397 --taa-gcTT-TC---CCATGT-C-------T-AG-TT-A
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       63925 24 -    234502 TTCAT-GTTT-TT---CCATGT-C-------C-ACA-T-A
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433              490 20 -     87323 TTTAT-ACTT-TT---CTGTGT-T-------C-A------
i Mellivora_capensis.MelCap_flattened_line_15433        I 1 I 3
s Meriones_unguiculatus.MerUng_scaffold_52233               12277 24 +     15977 TCTAT-GC-CCAT---TCCCAT-T-------A-A-ATT-A
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1046462 24 -  26018355 tctat-gC-CTgt---ccacat-t-------a-a-ata-a
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Microcebus_murinus.CM007691.1                          16509797 24 +  47401472 ttcat-gcTT-TT---CTATGT-C-T-T-G-T-T-----A
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  31136 21 -     48017 ---GT-GTTA-TT---TCATGA-C-------C-A-CTT-A
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               22220 24 -     32043 TTCAC-GCTT-TT---CCGTAT-C-------C-A-CTT-A
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22819618 24 -  98408828 TCTAT-GC-ATTT---CCACAT-T-------A-A-A-TCA
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8209213 24 +  10048721 TGCAT-GCTT-TT---CCATGT-C-------C-A-CTT-A
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            33866 24 +     45743 TGCAT-GCTT-TT---CCATGT-C-------C-A-CTT-A
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         1613 21 +     29742 TTTAT-ACTT-TT---CCACTT-C-------T-T-----A
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        10998 20 -    104932 TTTAT-ACTT-TT---CCATGT-C-------C-A------
i Mirounga_angustirostris.MirAng_flattened_line_8852    I 1 I 3
s Mirza_zaza.k141_226143                                     5183 24 +      8497 TTCAT-GCTT-TT---CTATGT-C-T-T-G-T-T-----A
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 145921 24 +    154973 TTCAT-GCTT-TT---CCACAT-C-------C-A-CTT-A
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                160732 24 +    265003 TTCAT-GCTT-TT---CCATAT-C-------C-A-CTT-A
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                   526 23 -     19904 -TAAT-ACTT-TT---CCACAT-C-------C-C-CTT-A
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  144421 20 -    168139 TTTAT-ACTT-TT---CCATGT-C-------C-A------
i Mungos_mungo.MunMun_flattened_line_8729               I 1 I 2
s Murina_feae.MurFea_scaffold_2254                          19075 21 -    100666 TTCGT-GCTT-TT---AT---T-T-------C-A-CTT-A
i Murina_feae.MurFea_scaffold_2254                      I 3 C 0
s Mus_caroli.LT608236.1                                  70766128 24 +  92629107 TCTAT-GC-CTGT---ccacat-t-------a-a-att-a
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75489187 24 +  98207768 TCTAT-GC-CTGT---Ccacat-t-------a-a-att-a
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67555417 19 +  89017189 TCTAT-GC-CTGT---CCACAT-T-------A--------
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74330365 24 +  97876770 TCTAT-GC-CTGT---ccacat-t-------a-a-att-a
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             11409 24 +     98495 TTTAA-TCTT-TT---TTTTTT-C-------T-AG--TCA
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4423857 20 -  28371801 tttat-actt-tt---ctctgT-C-------C-A------
i Mustela_putorius.JH417978.1                           I 1 I 3
s Myocastor_coypus.MyoCoy_scaffold_3653                     89565 15 -    117718 ------------C---CCATTT-G-------TAGGTA--A
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 11 C 0
s Myotis_brandtii.KE161952.1                               967370 21 +   8389877 TTCAT-GCTT-TT---AT---T-T-------C-A-CTT-A
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5019045 21 +   6462685 ttcat-gctt-tt---at---t-t-------C-A-CTT-A
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3464951 21 -   3747815 TTCAT-GCTT-TT---AT---T-T-------C-A-CTT-A
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        10165 21 +     66751 TTCAT-GCTT-TT---AT---T-T-------C-A-CTT-A
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             4573 24 -      8794 TATTT-GCTT-TT---CCATGT-C-------C-A-CTT-A
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            117974 24 +    362372 tttat-gccT-AA---CCACAT-A-------A-AG-TT-A
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               8114 21 +     48152 TTTAT-ACTT-TT---CCACCT-C-------T-T-----A
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4484390 20 -  14209539 tttat-actt-tt---ccatGT-C-------C-A------
i Neomonachus_schauinslandi.NINY01007774.1              I 1 I 3
s Neophocaena_asiaeorientalis.KZ688543.1                  3950536 24 -   4490290 ttcAT-GCTT-TT---CCACAT-C-------C-A-CTT-A
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  48831 24 +     94413 TTCAT-ACTT-TT---CCATGT-C-------C-A-CTT-A
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_220265                              40 21 +      1763 TTTAT-ACTT-TT---CCACCT-C-------T-T-----A
i Nomascus_annamensis.k141_220265                       C 0 C 0
s Nomascus_concolor.k141_226614                               833 21 -      5092 TTTAT-ACTT-TT---CCACCT-C-------T-T-----A
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_642452                            1616 21 +      2851 TTTAT-ACTT-TT---CCACCT-C-------T-T-----A
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             24551 21 -  18771707 TTTAT-ACTT-TT---CCACCT-C-------T-T-----A
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  2254 21 +      4512 TTTAT-ACTT-TT---CCACCT-C-------T-T-----A
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                30435 20 +   3668941 tttat-actt-tt---ccatGT-T-------C-A------
i Nyctereutes_procyonoides.CAJHUB010000786.1            I 1 I 3
s Nycticebus_bengalensis.LG16                            65566575 21 -  95554990 ---AT-GCTC-TT---CCATGT-C-------T-TG-TT-A
i Nycticebus_bengalensis.LG16                           I 1 C 0
s Nycticebus_coucang.k141_2051882                            3304 21 +      6470 ---AT-GCTC-TT---CCATGT-C-------T-TG-TT-A
i Nycticebus_coucang.k141_2051882                       I 1 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65668915 20 +  89412551 ---AT-GCTC-TT---CCATGT-C-------T-TG--T-A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     I 1 C 0
s Ochotona_princeps.JH802095.1                            4995577 24 -  23139505 CTTAT-GCTT-TT---TCATGG-C-------T-AGAA--A
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3685113 15 +  10294119 ------------C---CCATGT-C-------TAGG--TGA
i Octodon_degus.JH651621.1                              I 11 C 0
s Odobenus_rosmarus.KB229369.1                             679055 20 -   3126709 tttat-agtt-tt---ccacGT-C-------C-A------
i Odobenus_rosmarus.KB229369.1                          I 1 I 3
s Odocoileus_virginianus.KZ101650.1                       1079215 23 +   1425656 -taat-gctt-tt---ccaCAT-C-------C-C-CTT-A
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         36509 23 +     78940 -taat-gctt-tt---ccACAT-C-------C-C-CTT-A
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  124871 24 +    145789 TCTAT-GC-ATAT---CCACAT-T-------A-AG--TCA
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  36675 23 +     62360 TCTAT-GC-C-AT---CCACAT-T-------A-A-A-TCA
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7224218 24 -   7562323 ttcaT-GCTT-TT---CCACAT-C-------C-A-CTT-A
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              43485 24 -     66828 TGTGT-GTTG-TT---TCATAC-C-------C-A--CTGA
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141875848 24 + 163896628 tttat-gttt-tt---tcttgt-C-------T-AG--TGA
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      307720 20 -    505867 tttat-actt-tt---ccatGT-T-------C-A------
i Otocyon_megalotis.JAEUCK010005121.1                   I 1 I 3
s Otolemur_crassicaudatus.k141_321880                       38479 24 +     38679 TCCAC-GCTC-TT---CTATGT-C-------T-TG--TCA
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18007906 24 -  38779656 tccac-GCTC-TT---CTATGT-C-------T-TG--TCA
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134076774 23 - 275406953 -tgaa-aCTT-TT---CCATAT-C-------T-C-CTT-A
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      77988 23 +    140051 -TGGA-ACTT-TT---CCATAT-C-------T-C-CTT-A
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127574259 21 - 205426864 tttat-actt-tt---ccaCCT-C-------T-T-----A
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120151412 21 - 196562556 tttat-actt-tt---ccaCCT-C-------T-T-----A
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  33844 20 +    295523 TTTAC-ACTT-TT---CCGTGT-C-------C-A------
i Panthera_onca.PanOnc_flattened_line_1615              I 1 I 2
s Panthera_pardus.KV860323.1                              3637580 20 +  18214204 tttac-actt-tT---CTGTGT-C-------C-A------
i Panthera_pardus.KV860323.1                            I 1 I 2
s Panthera_tigris.KE721879.1                              5027253 20 -   6340057 tttat-actt-tt---ccgTGT-C-------C-A------
i Panthera_tigris.KE721879.1                            I 1 I 2
s Pantholops_hodgsonii.KE114631.1                         1065634 23 -   1292953 -taaa-actt-tt---ccataT-C-------T-C-CTT-A
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188155851 18 - 188283584 tttat-actt-tt---cca----c-------T-T-----A
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             4167 18 +      5367 TTTAT-ACTT-TT---CCA----C-------T-T-----A
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47513238 18 +  47705337 TTTAT-ACTT-TT---CCA----C-------T-T-----A
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 67215 18 -    104429 TTTAT-ACTT-TT---CCA----C-------T-T-----A
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    5748 18 +     14967 TTTAT-ACTT-TT---CCA----C-------T-T-----A
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 1608 18 -      7628 TTTAT-ACTT-TT---CCA----C-------T-T-----A
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    115298 20 -    135482 GTTAT-ACTT-TT---CCATAT-T-------C-A------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 I 1 I 2
s Perodicticus_ibeanus.k141_117958                           4889 22 -     23713 --AAT-GTTC-TT---CCATGT-C-------T-t-att-a
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            24198 22 -     27972 --AAT-GTTC-TT---CCATGT-C-------T-T-att-a
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      43180 24 -     45160 TTTAT-ATTT-TT---CTATAT-T-------T-AG--TGA
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4949909 23 -   8017169 tctat-GC-C-AT---CCACAT-T-------A-A-A-TCA
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    12041 15 -     36578 ------------C---TCATGT-C-------TAG-A-TAA
i Petromus_typicus.PetTyp_scaffold_33007                I 3 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            120825 24 -    122454 TTCAT-GCTT-TT---CCACAT-C-------C-A-CTT-A
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1987485                           1633 21 -      5908 TTTAT-ACTT-TT---CTACCT-C-------T-T-----A
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       2257 21 -     17985 TTTAT-ACTT-TT---CTACCT-C-------T-T-----A
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            1624 21 +      7694 TTTAT-ACTT-TT---CTACGT-C-------T-T-----A
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26740102 21 +  26888534 tttat-actt-tt---ctacCT-C-------T-T-----A
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            96999 11 +    112873 ------------T---AT---T-T-------C-A-TTT-A
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             43233 20 -     61926 -TTAT-ACTT-TT---CCACGT-C-------T-T-----A
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        24664 20 +     78826 -TTAT-ACTT-TT---CCACGT-A-------T-T-----A
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              8613 20 -     15800 -TTAT-ACTT-TT---CCACGT-C-------T-T-----A
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        11811 20 -     16101 -TTAT-ACTT-TT---CCACGT-C-------T-T-----A
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          5120 20 +      9673 -TTAT-ACTT-TT---CCACGT-C-------T-T-----A
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13474116 20 -  19735023 -TTAT-ACTT-TT---CCACGT-C-------T-T-----A
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           13022 20 -     31692 -TTAT-ACTT-TT---CCACGT-C-------T-T-----A
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           4905 24 +     21690 TTCAT-GCTT-TT---CCACAT-C-------C-A-CTT-A
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       22455 20 +     44506 -TTAT-ACTT-TT---ACAGGT-C-------T-T-----A
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        22667 20 +     67491 -TTAT-ACTT-TT---ACAGGT-C-------T-T-----A
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      12906 20 -     98129 -TTAT-ACTT-TT---ACAGGT-C-------T-T-----A
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     22506 20 +    147771 -TTAT-ACTT-TT---ACAGGT-C-------T-T-----A
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        22761 20 -     23762 -TTAT-ACTT-TT---ACAGGT-C-------T-T-----A
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          3227 20 -     55515 -TTAT-ACTT-TT---ACAGGT-C-------T-T-----A
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         22580 20 +    152463 -TTAT-ACTT-TT---ACAGGT-C-------T-T-----A
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                        297 20 -    119457 -TTAT-ACTT-TT---ACAGGT-C-------T-T-----A
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         12302 20 +    134592 -TTAT-ACTT-TT---ACAGGT-C-------T-T-----A
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          22890 20 -     75465 -TTAT-ACTT-TT---ACAGGT-C-------T-T-----A
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              186785 21 -    373494 tttat-actt-tt---ccaCCT-C-------T-T-----A
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19807433 21 +  19899266 TTTAT-ACTT-TT---CCACCT-C-------T-T-----A
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               5359 21 -     15069 TTTAT-ACTT-TT---CCACCT-C-------T-T-----A
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              5493 21 +     14865 TTTAT-ACTT-TT---CCACCT-C-------T-T-----A
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                76842 25 +     78963 TACGC-ATTG-TT---TCACTCTG-------C-A-TGT-A
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6848158 21 +  12164890 ttcat-gctT-TT---CCATGT-C-------T-T-----A
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coronatus.k141_1353159                         3219 24 +     11805 TTCAT-GCTT-TT---CCATGT-C-------T-TG-TT-A
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           42556 24 +     52369 TTCAT-GCTT-TT---CCATGT-C-------T-TG-TT-A
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         34944 24 -     44753 TTCAT-GCTT-TT---CCATGT-C-------T-TG-TT-A
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            16866 24 +     27322 TTCAT-GCTT-TT---CCATGT-C-------T-TG-TT-A
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       16501 24 -     53241 TTCAT-GCTT-TT---CCATGT-C-T-T-G-T-T-----A
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         38772 24 -     48185 TTCAT-GCTT-TT---CCATGT-C-T-T-G-T-T-----A
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           33829 24 +     77221 CCTAT-GC-CCAT---TCACAT-T-------A-A-ATT-A
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            3390 24 -     27784 ttcat-gttt-tt---ctaTAT-C-------C-A-CTT-A
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        246165 20 -    344369 TTTAT-ACTT-TT---CTGTGT-C-------C-A------
i Pteronura_brasiliensis.PteBra_flattened_line_1343     I 1 I 3
s Pteropus_alecto.KB031157.1                             13245491 24 -  17261082 ttcat-gttt-tt---ccaTGT-C-------C-A-CTT-A
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             603446 24 -   3946241 ttcat-gttt-tt---ccaTGT-C-------C-A-CTT-A
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131533838 20 - 161321710 tttac-actt-tt---CCGTGT-C-------C-A------
i Puma_concolor.QAVW01000427.1                          I 1 I 2
s Pygathrix_cinerea.k141_374971                             29477 21 +     56732 TTTAT-ACTT-TT---CTACCT-C-------T-T-----A
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6805968 21 +   6970761 TTTAT-ACTT-TT---CTACCT-C-------T-T-----A
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             5362 21 +     18040 TTTAT-GCTT-TT---CTACCT-C-------T-T-----A
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                15292 23 +     68503 -TAAT-GCTT-TT---CCACAT-C-------C-C-CTT-A
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13915128 24 +  90463843 tttat-gt-cTGA---CCACAT-T-------A-A-ATT-A
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1787327 24 +   2252614 TTCAT-GCTT-TT---CCATGT-C-------C-AG-TT-A
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_1391695                           1590 21 -      1866 TTTAT-ACTT-TT---CCACCT-C-------T-T-----A
i Rhinopithecus_bieti.k119_1391695                      C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206377247 21 - 206558726 tttat-actt-tt---ccaCCT-C-------T-T-----A
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44856147 21 -  45163003 TTTAT-ACTT-TT---CCACCT-C-------T-T-----A
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                18815 24 +    109198 TTCAT-GTTT-TT---CCATGT-C-------C-A-TTT-A
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       7454 23 +     12214 -TAAA-ACTT-TT---CCACAT-C-------T-C-CTT-A
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15672321 20 -  43202129 -ttat-actt-tt---ccatGT-C-------T-T-----A
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        4238 20 +     34089 -TTAT-ACTT-TT---CCATGT-C-------T-T-----A
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              4179 20 -     60842 -TTAT-ACTT-TT---CCATGT-C-------T-T-----A
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              4274 20 +     67014 -TTAT-ACTT-TT---CCATGT-C-------T-T-----A
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              4252 20 +     60816 -TTAT-ACTT-TT---CCATGT-C-------T-T-----A
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 4189 20 -     76454 -TTAT-ACTT-TT---CCATGT-C-------T-T-----A
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17340914 20 -  30362882 -TTAT-ACTT-TT---CCATAT-C-------T-T-----A
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         20273 20 -     62485 -TTAT-ACTT-TT---CCATAT-C-------T-T-----A
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   31811 22 -    114521 TCT---GTTT-TG---CCATGT-C-------C-A-CTT-A
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        2974 21 +     15331 TTTAT-ACTT-TT---CCACCT-C-------T-T-----A
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       8371 21 +     20762 TTTAT-ACTT-TT---CCACCT-C-------T-T-----A
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         118373 21 +    130994 TTTAT-ACTT-TT---CTACCT-C-------T-T-----A
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           37160 21 +     46263 TTTAT-ACTT-TT---CCACCT-C-------T-T-----A
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     30274 21 +     42640 TTTAT-ACTT-TT---CCACCT-C-------T-T-----A
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        13318 21 +     30600 TTTAT-ACTT-TT---CCACCT-C-------T-T-----A
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   99864 24 -    120886 TCTAT-GC-ATGT---CTACTT-T-------A-A-A-TCA
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            18387 24 +    739146 TTTAT-GCAT-TT---ACATGT-C-------T-G-CTT-A
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2239324 22 +   2842873 --taA-GCTT-TC---CCATGT-C-------T-AG-TT-A
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             234287 19 -    276980 TTTAT-A-TT-TT---CCATGT-C-------C-A------
i Spilogale_gracilis.SpiGra_flattened_line_905          I 1 I 3
s Suricata_suricatta.SurSur_flattened_line_20339            27103 20 +     62062 TTTAT-ACTT-TT---CCATGT-C-------C-A------
i Suricata_suricatta.SurSur_flattened_line_20339        I 1 I 2
s Sus_scrofa.CM000824.4                                 189271371 17 + 218635234 TTTAT-GCTT-TT---CAACAT------------------
i Sus_scrofa.CM000824.4                                 C 0 I 6
s Symphalangus_syndactylus.tarseq_24                        14533 21 -  13920577 TTTAT-ACTT-TT---TCACCT-C-------T-T-----C
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               5555 24 -      6213 TTCAT-GCTT-TT---CCATGT-C-------C-A-CTT-A
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               14230 24 +     45698 TATTT-GCTT-TT---CCATGT-C-------C-A-CTT-A
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      806398 20 +   1148477 TTTAT-GCTT-TT---CCATGT-C-------C-A------
i Tapirus_indicus.TapInd_scaffold_176                   I 1 I 3
s Tapirus_terrestris.TapTer_scaffold_14939                  57089 20 +     99546 TTTAT-GCTT-TT---CCATGT-C-------C-A------
i Tapirus_terrestris.TapTer_scaffold_14939              I 1 I 3
s Tarsius_lariang.k141_609102                               26060 24 +     42269 TTTGT-GCTT-TT---TCATGT-C-------T-TG-TT-G
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               59376 24 +     65473 TTTGT-GCTT-TT---TCATGT-C-------T-TG-TT-G
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194007378 18 - 194193292 tttat-actt-tt---cca----c-------T-T-----A
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             38865 15 -     47444 ------------C---TCATGT-G-------TAG-A-TAA
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         I 3 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  5066 24 +      6782 TATAT-CCTT-TT---CCTTGT-C-------C-A-CTT-A
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  135391 24 -    259118 TTCAT-GCTT-TT---CCATAT-C-------C-A-CTT-A
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        26478 21 +     38948 TTTAT-ACTT-TT---CCACCT-C-------T-T-----A
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   20208 10 -     32910 TTTAT-ACTT-T----------------------------
i Trachypithecus_crepusculus.k141_1588528               C 0 I 10
s Trachypithecus_cristatus.k141_1011511                      1595 21 -     12939 TTTAT-ACTT-TT---CCACCT-C-------T-T-----A
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       1530 21 -     14244 TTTAT-ACTT-TT---CCACCT-C-------T-T-----A
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           42928 21 -     54611 TTTAT-ACTT-TT---CCACCT-C-------T-T-----A
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                         734 21 -     11566 TTTAT-ACTT-TT---CCACCT-C-------T-T-----A
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     2906 21 -     15592 TTTAT-ACTT-TT---CCACCT-C-------T-T-----A
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          1563 21 +     14371 TTTAT-ACTT-TT---CCACCT-C-------T-T-----A
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  51315 21 +     51589 TTTAT-ACTT-TT---CCACCT-C-------T-T-----A
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       14496 21 +     14732 TTTAT-ACTT-TT---CCACCT-C-------T-T-----A
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       4968 10 -     28054 TTTAT-ACTT-T----------------------------
i Trachypithecus_obscurus.k141_1115109                  C 0 I 10
s Trachypithecus_phayrei.ctg3                            44659768 10 -  44834318 TTTAT-ACTT-T----------------------------
i Trachypithecus_phayrei.ctg3                           C 0 I 10
s Trachypithecus_pileatus.k141_1022309                       2071 21 +     13828 TTTAT-ACTT-TT---CCACCT-C-------T-T-----A
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   4678 23 +     90398 -TCCT-GCTT-TT---CAATGT-C-------C-A-CTT-A
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16082025 24 +  31416278 TGTGT-GTTG-TT---TCAAGC-C-------C-A-CTT-A
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2792432 24 -   3938065 TTTAT-GCTT-TC---CTACGT-C-------T-GG-TT-A
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    4637 24 +     13056 TTTAT-GCTT-TC---TTACAT-C-------T-AG-TT-A
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69312935 24 -  96451834 ttcat-GCCT-TT---CCACAT-C-------C-A-CTT-A
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                    822 24 +     10241 TTTAT-GGTT-TT---CCATGT-C-------C-A-CTT-A
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 I 34
s Ursus_maritimus.KK498671.1                              6514303 20 +  28682327 tttaa-actt-tt---ccatGT-C-------C-A------
i Ursus_maritimus.KK498671.1                            I 1 I 3
s Varecia_rubra.k141_432109                                  4858 24 -     20643 TTCAT-GCTT-TT---CCATGT-C-------T-TG-TT-A
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             24399 24 -     33872 TTCAT-GCTT-TT---CCATGT-C-------T-TG-TT-A
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1524177 24 -   2331223 tttat-gcTT-TC---CCAAGC-C-------C-A-CTT-A
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                137813 20 -    281493 TTTAT-ACTT-TT---CCATGT-T-------C-A------
i Vulpes_lagopus.VulLag_flattened_line_2045             I 1 I 3
s Xerus_inauris.XerIna_scaffold_7898                       126436 22 -    134049 --TAA-GCTT-TT---TCATGT-C-------T-AG-TT-A
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        213781 20 -    227762 TTTAT-ACTT-TT---CCATGT-C-------C-A------
i Zalophus_californianus.ZalCal_flattened_line_4097     I 1 I 3
s Zapus_hudsonius.ZapHud_scaffold_64392                     14527 24 -     20485 TTTGT-GCTT-TT---TCATAT-T-------T-A--CTCA
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           6427 24 -      8775 TTCAT-GCTT-TT---CCACAT-C-------T-G-CTT-A
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Sorex_araneus.JH798170.1                               17750754 3364 -  27805282 I
e Erinaceus_europaeus.JH835290.1                         11531598 1064 +  16010500 I
e Elephantulus_edwardii.JH947210.1                        7804622 10712 +  15467074 I
e Crocidura_indochinensis.CroInd_scaffold_88140              1523  7 +     11655 I
e Hylobates_pileatus_a.tarseq_592                             33341 34 -     60944 I
e Propithecus_coquerelli.NW_012147997.1                    667273 6500 -   2312742 I
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I
e Cavia_aperea.AVPZ01000278.1                            15786075 94 -  24422027 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               11404 4 +    209709 A-GCT
s Acinonyx_jubatus.LLWD01000356.1                         2033522 3 +   3721120 --GCT
i Acinonyx_jubatus.LLWD01000356.1                       I 2 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    112159 4 -    189883 A-AGT
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10656837 3 +  23371972 --GCT
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 3 C 0
s Ailurus_fulgens.LNAC01000003.1                          7094181 3 -  16596857 --GCT
i Ailurus_fulgens.LNAC01000003.1                        I 3 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   16462 4 -     22067 A-ACT
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                    888 4 -     60446 A-GCT
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         1611 4 -     29318 A-ACT
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                          546 4 +     38766 A-ACT
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          1505 4 -     80423 A-ACT
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             9798 4 -     18050 G-GCT
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                 10891 4 -     11521 G-GCT
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                             10475 4 -     21359 G-GCT
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                  90 4 +      2129 G-GCT
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          9774 4 -     10438 G-GCT
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            6430 4 +      7047 G-GCT
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             9710 4 +     10410 G-GCT
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            3518 4 -      4927 G-GCT
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3519655 4 +   4113121 A-GTT
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      389861 4 -    631301 A-GCT
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            30238 4 +     33004 A-GTT
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 62161 4 +     78111 G-GCT
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            5102 4 +     22701 G-GCT
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5749059 4 +   9889416 G-GCT
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             5646 4 -    104377 G-GCT
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               5648 4 +     23246 G-GCT
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     3277 4 +      5067 A-ACT
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_587554                         515 4 +      9265 a-gct
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 8272 4 -     29036 A-GCT
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9538907 4 +  39197703 G-GCT
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             60178 4 +     85812 G-GCT
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                11190 4 +     89302 G-GCT
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             15695 4 -     58268 G-GCT
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             63686 4 +    119057 G-GCT
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               5655 4 -     25888 G-GCT
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 6320 4 -     16375 A-GTT
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              2640 4 +      2719 A-GTT
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26379679 4 +  51448160 A-GTT
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        4910 4 -     13118 A-GTT
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   42718 4 -     72089 A-GTT
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6559393 4 +   6870073 A-GTT
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138139497 4 - 161108492 A-GTT
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     572034 4 -    998990 A-GTT
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136295230 4 - 158972876 A-GTT
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1232313 4 -   1914593 A-GTT
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               113545 4 -    171031 G-GCT
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 12576 4 +    125063 G-GCT
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                14621 4 -    216513 G-GCT
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        7161 4 -    134917 G-GCT
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3219097 4 -   8989139 A-GCT
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           396799 4 -  15254737 A-GCT
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2972534 4 +   6889770 A-GCT
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11518996 3 +  39901454 --GCT
i CanFam4.chr31                                         I 3 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   14021 3 +     87036 --GCT
i Canis_lupus_VD.CanFam_VD_scaffold_16982               I 3 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11265663 3 -  35597290 --GCT
i Canis_lupus_dingo.QKWQ01001993.1                      I 3 C 0
s Canis_lupus_familiaris.chr31                           11088197 3 +  39895921 --GCT
i Canis_lupus_familiaris.chr31                          I 3 C 0
s Canis_lupus_orion.HG994411.1                           16455212 3 -  44759192 --GCT
i Canis_lupus_orion.HG994411.1                          I 3 C 0
s Capra_aegagrus.CM003214.1                              21324731 4 + 157394656 A-GTT
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135705958 4 - 157403528 A-GTT
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          308602 4 +    345090 G-GTT
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               59065 4 +     67245 A-GCT
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   30280 4 +     33760 A-ATT
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   158406 4 -    276539 A-GTA
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_porcellus.DS562889.1                             15798087 4 -  24440124 A-AAC
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       176278 4 +    436027 A-AAC
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18890390 4 -  29618158 G-GCT
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 7934 4 -     26817 G-GCT
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                12174 4 +     25043 G-GCT
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         7636 4 +     21754 G-GTT
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4363410 3 +   7569818 --GCT
i Ceratotherium_simum.JH767818.1                        I 3 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         3167 3 -      9338 --GCT
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    I 3 C 0
s Cercocebus_atys.KQ010443.1                              6554833 4 +   6739814 A-GCT
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      26310 4 +     60454 A-GCT
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          1515 4 -     21101 A-GCT
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         58825 4 -    107033 A-GCT
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        1717 4 -     17608 A-GCT
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          29212 4 +     30494 A-GCT
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          58058 4 -     59240 A-GCT
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          1759 4 +     16677 A-GCT
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           23917 4 +     35983 A-GCT
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11990445 4 +  12117833 A-GCT
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46477203 4 +  46592721 A-GCT
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      40754 4 -     45581 A-GCT
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       1760 4 +     35577 A-GCT
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        1536 4 -     25661 A-GCT
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        1514 4 -     17744 A-GCT
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        21130 4 +     37128 A-GCT
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           2342 4 -      6963 G-GCT
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           58606 4 -     68416 A-GTT
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            7650 4 +     13308 A-GTT
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             5191 4 -     18223 G-GCT
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             22214 4 +     25473 G-GCT
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           41249 4 +     57117 G-GCT
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          45928 4 +     54541 G-GCT
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15961314 4 +  43084221 A-ATT
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         70752 4 +    196370 G-GCT
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          14932 4 +     40510 G-GCT
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15138676 4 -  15256731 A-GCT
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      33723 4 -     53260 A-GCT
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101144287 4 + 101219884 A-GCT
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                16024 4 -     21363 A-GCT
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           761331 4 +    964067 A-GCT
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10886053 4 +  10971483 A-GCT
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147664217 4 + 156195979 A-GCT
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            16202 4 +     23629 A-GCT
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60613156 2 +  78930452 a---t
i Condylura_cristata.JH655880.1                         I 137 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         39231 4 -     40477 A-GTT
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 278114 4 -    399297 A-AGT
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53028778 4 +  72327488 A-AGT
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_88140              1530 4 +     11655 A-ATT
i Crocidura_indochinensis.CroInd_scaffold_88140         I 7 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            51542 3 -     70449 --GCT
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 3 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  207726 4 -    956709 A-GCT
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 30301 4 -     67205 A-AAT
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                17332 4 +     26546 A-AAT
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             58418 4 -    236241 A-AAT
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          183216 4 -   6883506 G-GCT
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16844465 4 +  31942871 A-GCT
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80036357 4 -  96802777 A-GTT
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18698337 4 -  18957592 A-GCC
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 322062 3 +    993696 --GTT
i Dicerorhinus_sumatrensis.PEKH010003161.1              I 3 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   2712 3 +    151128 --GCT
i Diceros_bicornis.DicBicMic_scaffold_9545              I 3 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   156573 2 +    228994 A-A--
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3655673 4 +   4240102 A-AGT
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 27306 4 +     28912 A-AGT
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                35669 4 -     73477 A-ATT
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22994723 4 -  44670279 A-GTA
i Echinops_telfairi.JH980316.1                          C 0 I 3211
s Eidolon_helvum.KE772537.1                                 11760 4 +     24177 A-GCT
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1491007 4 +   1727528 A-GTT
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        239343 4 -    369425 A-AGT
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           6456 4 -      7838 A-AGT
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85871700 3 +  99434291 --GCT
i Enhydra_lutris.KZ291749.1                             I 3 C 0
s Eptesicus_fuscus.JH977687.1                             4703710 4 +   6522550 a-gCT
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5852461 3 -   7175178 --GCT
i Equus_asinus.JREZ01000062.1                           I 3 C 0
s Equus_caballus.CM000402.2                              13350964 3 +  41866177 --ACT
i Equus_caballus.CM000402.2                             I 3 C 0
s Equus_przewalskii.ATBW01073585.1                          12454 3 +     92910 --ACT
i Equus_przewalskii.ATBW01073585.1                      I 3 C 0
s Erythrocebus_patas.Contig8                             48770854 4 -  48907691 A-GCT
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          314563 4 +    330699 A-GTT
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             61017 4 +     89355 A-GTT
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              4658 4 +     13586 A-GTT
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               4594 4 -      6809 A-GTT
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            11067 4 +     36558 A-GTT
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             7387 4 +     60246 A-GTT
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                10865 4 +    109717 A-GTT
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               15249 4 +     16540 A-GTT
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                15523 4 +     27497 A-GTT
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           17979 4 +     26808 A-GTT
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                32715 4 +     46535 A-GTT
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              15437 4 -     29447 A-GTT
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129892499 3 - 159252932 --GCT
i Felis_catus.CM001386.2                                I 2 C 0
s Felis_catus_fca126.CM031420.1                         129279568 3 - 158578461 --GCT
i Felis_catus_fca126.CM031420.1                         I 2 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 20713 3 +     52776 --GCT
i Felis_nigripes.FelNig_flattened_line_8080             I 2 C 0
s Galago_moholi.ctg555                                     210398 4 -    847004 A-GCT
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           12777 4 -     43889 A-Gct
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           9854 4 +     27357 A-gct
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               155841 4 +    324696 A-GCT
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    180804 4 -    189561 A-GTT
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           12647 4 -     18683 T-ATT
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               4920 4 -     14630 A-GCT
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119652019 4 - 195582420 A-GCT
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   77192 4 +    118900 A-ACT
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         1437 4 +     10286 A-GTT
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_1254239                            9613 4 +      9690 A-GTT
i Hapalemur_gilberti.k141_1254239                       C 0 C 0
s Hapalemur_griseus.k141_1387522                             5243 4 +     56096 A-GTT
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        28493 4 -     42470 A-GTT
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        45116 4 -     54384 A-GTT
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              16747 3 +     53719 --GCT
i Helogale_parvula.HelPar_flattened_line_22962          I 2 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                27003 4 -     91191 A-GTT
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2550649 4 +  31725842 A-AAT
i Heterocephalus_glaber.JH602058.1                      C 0 I 11
s Heterohyrax_brucei.HetBruBak_scaffold_25354               57003 4 +     73687 G-GTG
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 I 3071
s Hippopotamus_amphibius.HipAmp_scaffold_1308              146651 4 +    277961 A-GTT
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      277934 3 -    477199 --GCC
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              7086 3 -      9143 --GCC
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      4326 4 -   7690867 A-GCT
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 16819 3 -     67322 --GCT
i Hyaena_hyaena.HyaHya_flattened_line_20729             I 2 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           18551 4 -    119109 A-ACT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              4752 4 +      5897 A-GCT
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_624065                               1616 4 +      2112 A-GCT
i Hylobates_agilis.k141_624065                          C 0 C 0
s Hylobates_klossii.k141_466549                             11192 4 +     11537 A-GCT
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14624297 4 -  25970782 A-GCT
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            1553 4 -      2977 A-GCT
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             33375 4 -     60944 t-gtt
i Hylobates_pileatus_a.tarseq_592                         I 34 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     5719 4 +     22540 A-AAT
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7125428 4 +  13083262 A-ACT
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_4418183                                   1086 4 -      1457 A-GTT
i Indri_indri.k141_4418183                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               8557 4 +     17520 A-GTT
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8565472 4 +  11848649 A-ACT
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               23173 4 +     37189 A-GTT
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          49775 4 -    147782 G-GCT
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   113801 4 -    115756 A-GCT
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258406798 4 - 285822530 A-GTT
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        23552 4 +     39228 A-GTT
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            52939 4 +     63517 A-GTT
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        78195 4 +    116806 A-GTT
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     31191 4 -     33031 A-GTT
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3085508 3 -   3498232 --GCT
i Leptonychotes_weddellii.KB714749.1                    I 3 C 0
s Lepus_americanus.LepAme_scaffold_62849                    12830 4 +     22452 A-ACT
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            135510 4 +   3060487 A-GTT
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19247919 4 +  19376315 A-GCT
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           10161 4 +     84689 A-GCT
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3777910 4 +   6799190 A-GCT
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20591599 4 -  62548349 a-gtg
i Loxodonta_africana.GL010040.1                         C 0 I 2174
s Lycaon_pictus.CM007556.1                               11087653 3 +  39895028 --GCT
i Lycaon_pictus.CM007556.1                              I 3 C 0
s Macaca_arctoides.k141_2201161                             19662 4 +     74745 A-GCT
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12706118 4 +  12821369 A-GCT
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                1763 4 -      3136 A-GCT
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           46580 4 +     63263 A-GCT
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                 1283 4 -      2568 A-GCT
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 1869 4 -      7381 A-GCT
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  45087 4 -     79256 A-GCT
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196035195 4 + 196197964 A-GCT
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11445363 4 +  11645122 A-GCT
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   4034 4 -     46448 A-GCT
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                1706 4 -     13212 A-GCT
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 15387 4 -     55006 A-GCT
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43840504 4 +  43892939 A-GCT
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               16673 4 -     24607 A-GCT
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               4039 4 -     27140 A-GCT
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                701133 4 +    802869 A-GCT
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43437081 4 -  43563597 A-GCT
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4449907 4 -   4543643 A-GCT
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            145192 3 +    252755 --GCT
i Manis_javanica.JSZB01003966.1                         I 3 C 0
s Manis_pentadactyla.KN017078.1                             35269 3 +     58827 --GCT
i Manis_pentadactyla.KN017078.1                         I 3 C 0
s Marmota_marmota.CZRN01000005.1                         36873270 4 +  64221397 A-ATT
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       63949 4 -    234502 A-CCT
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433              513 3 -     87323 --GCT
i Mellivora_capensis.MelCap_flattened_line_15433        I 3 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               12301 4 +     15977 A-AGT
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1046486 5 -  26018355 aaaaa
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Microcebus_murinus.CM007691.1                          16509821 4 +  47401472 A-ATG
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  31157 4 -     48017 A-GTA
i Microgale_talazaci.MicTal_scaffold_34660              C 0 I 2766
s Micronycteris_hirsuta.MicHir_scaffold_37978               22244 4 -     32043 A-GCT
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22819642 4 -  98408828 A-AGT
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8209237 4 +  10048721 A-GCT
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            33890 4 +     45743 A-GCT
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         1634 4 +     29742 A-GCT
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        11021 3 -    104932 --GCT
i Mirounga_angustirostris.MirAng_flattened_line_8852    I 3 C 0
s Mirza_zaza.k141_226143                                     5207 4 +      8497 A-GTT
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 145945 4 +    154973 A-GTT
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                160756 4 +    265003 A-GCT
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                   549 4 -     19904 A-GTT
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  144443 3 -    168139 --GCT
i Mungos_mungo.MunMun_flattened_line_8729               I 2 C 0
s Murina_feae.MurFea_scaffold_2254                          19096 4 -    100666 A-GCT
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70766152 4 +  92629107 a-ata
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75489211 4 +  98207768 a-ata
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67555436 4 +  89017189 A-AGA
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74330389 4 +  97876770 a-ata
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             11433 4 +     98495 A-AGT
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4423880 3 -  28371801 --GCC
i Mustela_putorius.JH417978.1                           I 3 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     89580 4 -    117718 A-AAT
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               967391 4 +   8389877 A-GCT
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5019066 4 +   6462685 A-GCT
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3464972 4 -   3747815 A-GCT
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        10186 4 +     66751 A-GCT
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             4597 4 -      8794 A-GCT
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            117998 4 +    362372 A-GCC
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               8135 4 +     48152 A-GCT
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4484413 3 -  14209539 --GCT
i Neomonachus_schauinslandi.NINY01007774.1              I 3 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3950560 4 -   4490290 A-GTT
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  48855 4 +     94413 A-GCT
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_220265                              61 4 +      1763 A-GCT
i Nomascus_annamensis.k141_220265                       C 0 C 0
s Nomascus_concolor.k141_226614                               854 4 -      5092 A-GCT
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_642452                            1637 4 +      2851 A-GCT
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             24572 4 -  18771707 A-GCT
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  2275 4 +      4512 A-GCT
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                30458 3 +   3668941 --GCT
i Nyctereutes_procyonoides.CAJHUB010000786.1            I 3 C 0
s Nycticebus_bengalensis.LG16                            65566596 4 -  95554990 A-GCT
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            3325 4 +      6470 A-GCT
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65668935 4 +  89412551 A-GCT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Octodon_degus.JH651621.1                                3685128 4 +  10294119 A-AAT
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             679078 3 -   3126709 --GCT
i Odobenus_rosmarus.KB229369.1                          I 3 C 0
s Odocoileus_virginianus.KZ101650.1                       1079238 4 +   1425656 A-GTT
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         36532 4 +     78940 A-GTT
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  124895 4 +    145789 A-AGT
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  36698 4 +     62360 A-AGT
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7224242 4 -   7562323 A-GTT
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              43509 4 -     66828 A-GCA
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 I 13409
s Oryctolagus_cuniculus.CM000803.1                      141875872 2 + 163896628 A-A--
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      307743 3 -    505867 --GCT
i Otocyon_megalotis.JAEUCK010005121.1                   I 3 C 0
s Otolemur_crassicaudatus.k141_321880                       38503 4 +     38679 C-ACT
i Otolemur_crassicaudatus.k141_321880                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18007930 4 -  38779656 T-GCT
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134076797 4 - 275406953 A-GTT
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      78011 4 +    140051 A-GTT
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127574280 4 - 205426864 A-GCT
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120151433 4 - 196562556 A-GCT
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  33866 3 +    295523 --GCT
i Panthera_onca.PanOnc_flattened_line_1615              I 2 C 0
s Panthera_pardus.KV860323.1                              3637602 3 +  18214204 --Gct
i Panthera_pardus.KV860323.1                            I 2 C 0
s Panthera_tigris.KE721879.1                              5027275 3 -   6340057 --GCT
i Panthera_tigris.KE721879.1                            I 2 C 0
s Pantholops_hodgsonii.KE114631.1                         1065657 4 -   1292953 A-GTT
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188155869 4 - 188283584 A-GCT
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             4185 4 +      5367 A-GCT
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47513256 4 +  47705337 A-GCT
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 67233 4 -    104429 A-GCT
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    5766 4 +     14967 A-GCT
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 1626 4 -      7628 A-GCT
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    115320 3 -    135482 --GCT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 I 2 C 0
s Perodicticus_ibeanus.k141_117958                           4911 4 -     23713 a-gct
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            24220 4 -     27972 a-gct
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      43204 4 -     45160 A-CGT
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4949932 4 -   8017169 A-AGT
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    12056 4 -     36578 A-AGC
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            120849 4 -    122454 A-GTT
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1987485                           1654 4 -      5908 A-GCT
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       2278 4 -     17985 A-GCT
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            1645 4 +      7694 A-GCT
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26740123 4 +  26888534 A-GCT
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            97010 4 +    112873 A-GCT
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             43253 4 -     61926 G-GCT
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        24684 4 +     78826 G-GCT
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              8633 4 -     15800 G-GCT
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        11831 4 -     16101 G-GCT
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          5140 4 +      9673 G-GCT
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13474136 4 -  19735023 G-GCT
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           13042 4 -     31692 G-GCT
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           4929 4 +     21690 A-GTT
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       22475 4 +     44506 G-GCT
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        22687 4 +     67491 G-GCT
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      12926 4 -     98129 G-GCT
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     22526 4 +    147771 G-GCT
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        22781 4 -     23762 G-GCT
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          3247 4 -     55515 G-GCT
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         22600 4 +    152463 G-GCT
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                        317 4 -    119457 G-GCT
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         12322 4 +    134592 G-GCT
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          22910 4 -     75465 G-GCT
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              186806 4 -    373494 A-GCT
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19807454 4 +  19899266 A-GCT
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               5380 4 -     15069 A-GCT
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              5514 4 +     14865 A-GCT
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_15315                76867 4 +     78963 G-GCG
i Procavia_capensis.ProCapCap_scaffold_15315            C 0 N 0
s Prolemur_simus.MPIZ01000048.1                           6848179 4 +  12164890 A-GTT
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coronatus.k141_1353159                         3243 4 +     11805 A-GTT
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           42580 4 +     52369 A-GTT
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         34968 4 -     44753 A-GTT
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            16890 4 +     27322 A-GTT
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       16525 4 -     53241 A-ATT
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         38796 4 -     48185 A-GTT
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           33853 4 +     77221 A-AGT
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            3414 4 -     27784 A-GCT
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        246188 3 -    344369 --GCT
i Pteronura_brasiliensis.PteBra_flattened_line_1343     I 3 C 0
s Pteropus_alecto.KB031157.1                             13245515 4 -  17261082 A-GCT
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             603470 4 -   3946241 A-GCT
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131533860 3 - 161321710 --GCT
i Puma_concolor.QAVW01000427.1                          I 2 C 0
s Pygathrix_cinerea.k141_374971                             29498 4 +     56732 A-GCT
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6805989 4 +   6970761 A-GCT
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             5383 4 +     18040 A-GCT
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                15315 4 +     68503 A-GTT
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13915152 4 +  90463843 A-AGT
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1787351 4 +   2252614 A-GCT
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_1391695                           1611 4 -      1866 A-GCT
i Rhinopithecus_bieti.k119_1391695                      C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206377268 4 - 206558726 A-GCT
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44856168 4 -  45163003 A-GCT
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                18839 4 +    109198 A-GCT
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       7477 4 +     12214 A-GTT
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15672341 4 -  43202129 G-GCT
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        4258 4 +     34089 G-GCT
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              4199 4 -     60842 G-GCT
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              4294 4 +     67014 G-GCT
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              4272 4 +     60816 G-GCT
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 4209 4 -     76454 G-GCT
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17340934 4 -  30362882 G-GCT
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         20293 4 -     62485 G-GCT
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   31833 4 -    114521 A-GTT
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        2995 4 +     15331 A-GCT
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       8392 4 +     20762 A-GCT
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         118394 4 +    130994 A-GCT
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           37181 4 +     46263 A-GCT
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     30295 4 +     42640 A-GCT
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        13339 4 +     30600 A-GCT
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   99888 4 -    120886 A-ACT
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            18411 4 +    739146 A-ATT
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2239346 4 +   2842873 A-ACT
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             234309 3 -    276980 --GCT
i Spilogale_gracilis.SpiGra_flattened_line_905          I 3 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            27125 3 +     62062 --GCT
i Suricata_suricatta.SurSur_flattened_line_20339        I 2 C 0
s Sus_scrofa.CM000824.4                                 189271394 4 + 218635234 A-GTT
i Sus_scrofa.CM000824.4                                 I 6 C 0
s Symphalangus_syndactylus.tarseq_24                        14554 4 -  13920577 A-GCT
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               5579 4 -      6213 G-GCT
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               14254 4 +     45698 A-ACT
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      806421 3 +   1148477 --GTT
i Tapirus_indicus.TapInd_scaffold_176                   I 3 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  57112 3 +     99546 --GTT
i Tapirus_terrestris.TapTer_scaffold_14939              I 3 C 0
s Tarsius_lariang.k141_609102                               26084 4 +     42269 G-GTT
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               59400 4 +     65473 G-GTT
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194007396 4 - 194193292 A-GCT
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             38880 4 -     47444 A-TAG
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  5090 4 +      6782 G-GCT
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  135415 4 -    259118 A-GCT
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        26499 4 +     38948 A-GCT
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   20228 4 -     32910 A-GCT
i Trachypithecus_crepusculus.k141_1588528               I 10 C 0
s Trachypithecus_cristatus.k141_1011511                      1616 4 -     12939 A-GCT
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       1551 4 -     14244 A-GCT
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           42949 4 -     54611 A-GCT
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                         755 4 -     11566 A-GCT
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     2927 4 -     15592 A-GCT
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          1584 4 +     14371 A-GCT
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  51336 4 +     51589 A-GCT
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       14517 4 +     14732 A-GCT
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       4988 4 -     28054 A-GCT
i Trachypithecus_obscurus.k141_1115109                  I 10 C 0
s Trachypithecus_phayrei.ctg3                            44659788 4 -  44834318 A-GCT
i Trachypithecus_phayrei.ctg3                           I 10 C 0
s Trachypithecus_pileatus.k141_1022309                       2092 4 +     13828 A-GCT
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   4701 4 +     90398 A-GTT
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16082049 4 +  31416278 G-GCA
i Trichechus_manatus.JH594618.1                         C 0 I 2381
s Tupaia_chinensis.KB320831.1                             2792456 4 -   3938065 A-ACT
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    4661 4 +     13056 A-ATT
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69312959 4 -  96451834 A-GTT
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                    880 4 +     10241 A-CTT
i Uropsilus_gracilis.UroGra_scaffold_69449              I 34 C 0
s Ursus_maritimus.KK498671.1                              6514326 3 +  28682327 --GCT
i Ursus_maritimus.KK498671.1                            I 3 C 0
s Varecia_rubra.k141_432109                                  4882 4 -     20643 A-GAT
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             24423 4 -     33872 A-GAT
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1524201 4 -   2331223 A-GCT
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                137836 3 -    281493 --GCT
i Vulpes_lagopus.VulLag_flattened_line_2045             I 3 C 0
s Xerus_inauris.XerIna_scaffold_7898                       126458 4 -    134049 A-ACT
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        213804 3 -    227762 --GCT
i Zalophus_californianus.ZalCal_flattened_line_4097     I 3 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     14551 4 -     20485 A-ACT
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           6451 4 -      8775 A-GTT
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Sorex_araneus.JH798170.1                               17750754 3364 -  27805282 I
e Erinaceus_europaeus.JH835290.1                         11531598 1064 +  16010500 I
e Ochotona_princeps.JH802095.1                            4995601 0 -  23139505 C
e Elephantulus_edwardii.JH947210.1                        7804622 10712 +  15467074 I
e Propithecus_coquerelli.NW_012147997.1                    667273 6500 -   2312742 I
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I
e Cavia_aperea.AVPZ01000278.1                            15786075 94 -  24422027 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               11408 1 +    209709 T
s Acinonyx_jubatus.LLWD01000356.1                         2033525 1 +   3721120 T
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    112163 1 -    189883 G
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10656840 1 +  23371972 T
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7094184 1 -  16596857 T
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   16466 1 -     22067 T
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                    892 1 -     60446 T
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         1615 1 -     29318 T
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                          550 1 +     38766 T
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          1509 1 -     80423 T
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             9802 1 -     18050 T
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                 10895 1 -     11521 T
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                             10479 1 -     21359 T
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                  94 1 +      2129 T
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          9778 1 -     10438 T
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            6434 1 +      7047 T
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             9714 1 +     10410 T
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            3522 1 -      4927 T
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3519659 1 +   4113121 C
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      389865 1 -    631301 T
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            30242 1 +     33004 C
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 62165 1 +     78111 T
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            5106 1 +     22701 T
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5749063 1 +   9889416 T
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             5650 1 -    104377 T
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               5652 1 +     23246 T
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     3281 1 +      5067 T
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_587554                         519 1 +      9265 t
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 8276 1 -     29036 T
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9538911 1 +  39197703 T
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             60182 1 +     85812 T
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                11194 1 +     89302 T
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             15699 1 -     58268 T
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             63690 1 +    119057 T
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               5659 1 -     25888 T
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 6324 1 -     16375 T
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              2644 1 +      2719 T
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26379683 1 +  51448160 T
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        4914 1 -     13118 T
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   42722 1 -     72089 C
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6559397 1 +   6870073 C
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138139501 1 - 161108492 C
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     572038 1 -    998990 C
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136295234 1 - 158972876 C
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1232317 1 -   1914593 C
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               113549 1 -    171031 T
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 12580 1 +    125063 T
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                14625 1 -    216513 T
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        7165 1 -    134917 T
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3219101 1 -   8989139 T
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           396803 1 -  15254737 T
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2972538 1 +   6889770 T
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11518999 1 +  39901454 T
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   14024 1 +     87036 T
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11265666 1 -  35597290 T
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11088200 1 +  39895921 T
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16455215 1 -  44759192 T
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21324735 1 + 157394656 C
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135705962 1 - 157403528 C
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          308606 1 +    345090 T
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               59069 1 +     67245 T
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   30284 1 +     33760 T
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   158410 1 -    276539 T
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_porcellus.DS562889.1                             15798091 1 -  24440124 T
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       176282 1 +    436027 T
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18890394 1 -  29618158 T
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 7938 1 -     26817 T
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                12178 1 +     25043 T
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         7640 1 +     21754 T
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4363413 1 +   7569818 T
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         3170 1 -      9338 T
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6554837 1 +   6739814 T
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      26314 1 +     60454 T
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          1519 1 -     21101 T
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         58829 1 -    107033 T
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        1721 1 -     17608 T
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          29216 1 +     30494 T
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          58062 1 -     59240 T
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          1763 1 +     16677 T
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           23921 1 +     35983 T
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11990449 1 +  12117833 T
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46477207 1 +  46592721 T
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      40758 1 -     45581 T
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       1764 1 +     35577 T
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        1540 1 -     25661 T
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        1518 1 -     17744 T
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        21134 1 +     37128 T
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           2346 1 -      6963 T
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           58610 1 -     68416 T
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            7654 1 +     13308 T
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             5195 1 -     18223 T
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             22218 1 +     25473 T
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           41253 1 +     57117 T
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          45932 1 +     54541 T
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15961318 1 +  43084221 T
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         70756 1 +    196370 T
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          14936 1 +     40510 T
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15138680 1 -  15256731 T
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      33727 1 -     53260 T
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101144291 1 + 101219884 T
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                16028 1 -     21363 T
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           761335 1 +    964067 T
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10886057 1 +  10971483 T
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147664221 1 + 156195979 T
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            16206 1 +     23629 T
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60613158 1 +  78930452 t
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         39235 1 -     40477 T
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 278118 1 -    399297 G
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53028782 1 +  72327488 G
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_88140              1534 1 +     11655 T
i Crocidura_indochinensis.CroInd_scaffold_88140         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            51545 1 -     70449 T
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  207730 1 -    956709 T
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 30305 1 -     67205 T
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                17336 1 +     26546 T
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             58422 1 -    236241 T
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          183220 1 -   6883506 T
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16844469 1 +  31942871 T
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80036361 1 -  96802777 T
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18698341 1 -  18957592 T
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 322065 1 +    993696 T
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   2715 1 +    151128 T
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   156575 1 +    228994 C
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3655677 1 +   4240102 T
i Dipodomys_ordii.KN672545.1                            C 0 I 5
s Dipodomys_stephensi.DipSte_scaffold_44365                 27310 1 +     28912 T
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 I 5
s Dolichotis_patagonum.DolPat_scaffold_14102                35673 1 -     73477 T
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22997938 1 -  44670279 a
i Echinops_telfairi.JH980316.1                          I 3211 C 0
s Eidolon_helvum.KE772537.1                                 11764 1 +     24177 T
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1491011 1 +   1727528 C
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        239347 1 -    369425 G
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           6460 1 -      7838 G
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85871703 1 +  99434291 T
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4703714 1 +   6522550 T
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5852464 1 -   7175178 T
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13350967 1 +  41866177 T
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          12457 1 +     92910 T
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erythrocebus_patas.Contig8                             48770858 1 -  48907691 T
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          314567 1 +    330699 T
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             61021 1 +     89355 T
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              4662 1 +     13586 T
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               4598 1 -      6809 T
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            11071 1 +     36558 T
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             7391 1 +     60246 T
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                10869 1 +    109717 T
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               15253 1 +     16540 T
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                15527 1 +     27497 T
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           17983 1 +     26808 T
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                32719 1 +     46535 T
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              15441 1 -     29447 T
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129892502 1 - 159252932 T
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129279571 1 - 158578461 T
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 20716 1 +     52776 T
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Galago_moholi.ctg555                                     210402 1 -    847004 t
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           12781 1 -     43889 t
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           9858 1 +     27357 t
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               155845 1 +    324696 T
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    180808 1 -    189561 C
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           12651 1 -     18683 T
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               4924 1 -     14630 T
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119652023 1 - 195582420 T
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   77196 1 +    118900 T
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         1441 1 +     10286 T
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_1254239                            9617 1 +      9690 T
i Hapalemur_gilberti.k141_1254239                       C 0 C 0
s Hapalemur_griseus.k141_1387522                             5247 1 +     56096 T
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        28497 1 -     42470 T
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        45120 1 -     54384 T
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              16750 1 +     53719 T
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                27007 1 -     91191 C
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2550664 1 +  31725842 T
i Heterocephalus_glaber.JH602058.1                      I 11 I 1
s Heterohyrax_brucei.HetBruBak_scaffold_25354               60078 1 +     73687 T
i Heterohyrax_brucei.HetBruBak_scaffold_25354           I 3071 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              146655 1 +    277961 T
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      277937 1 -    477199 T
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              7089 1 -      9143 T
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      4330 1 -   7690867 T
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 16822 1 -     67322 T
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           18555 1 -    119109 T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              4756 1 +      5897 T
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_624065                               1620 1 +      2112 T
i Hylobates_agilis.k141_624065                          C 0 C 0
s Hylobates_klossii.k141_466549                             11196 1 +     11537 T
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14624301 1 -  25970782 T
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            1557 1 -      2977 T
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             33379 1 -     60944 t
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     5723 1 +     22540 T
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7125432 1 +  13083262 C
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 I 1
s Indri_indri.k141_4418183                                   1090 1 -      1457 T
i Indri_indri.k141_4418183                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               8561 1 +     17520 T
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8565476 1 +  11848649 T
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               23177 1 +     37189 T
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          49779 1 -    147782 T
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   113805 1 -    115756 C
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258406802 1 - 285822530 T
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        23556 1 +     39228 T
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            52943 1 +     63517 T
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        78199 1 +    116806 T
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     31195 1 -     33031 T
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3085511 1 -   3498232 T
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    12834 1 +     22452 T
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            135514 1 +   3060487 T
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19247923 1 +  19376315 T
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           10165 1 +     84689 T
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3777914 1 +   6799190 T
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20593777 1 -  62548349 T
i Loxodonta_africana.GL010040.1                         I 2174 C 0
s Lycaon_pictus.CM007556.1                               11087656 1 +  39895028 T
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             19666 1 +     74745 T
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12706122 1 +  12821369 T
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                1767 1 -      3136 T
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           46584 1 +     63263 T
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                 1287 1 -      2568 T
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 1873 1 -      7381 T
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  45091 1 -     79256 T
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196035199 1 + 196197964 T
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11445367 1 +  11645122 T
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   4038 1 -     46448 T
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                1710 1 -     13212 T
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 15391 1 -     55006 T
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43840508 1 +  43892939 T
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               16677 1 -     24607 T
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               4043 1 -     27140 T
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                701137 1 +    802869 T
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43437085 1 -  43563597 T
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4449911 1 -   4543643 T
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            145195 1 +    252755 T
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             35272 1 +     58827 T
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36873274 1 +  64221397 C
i Marmota_marmota.CZRN01000005.1                        C 0 I 1
s Megaderma_lyra.MegLyr_scaffold_3562                       63953 1 -    234502 T
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433              516 1 -     87323 T
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               12305 1 +     15977 G
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1046491 1 -  26018355 g
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Microcebus_murinus.CM007691.1                          16509825 1 +  47401472 T
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  33927 1 -     48017 T
i Microgale_talazaci.MicTal_scaffold_34660              I 2766 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               22248 1 -     32043 T
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22819646 1 -  98408828 G
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8209241 1 +  10048721 T
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            33894 1 +     45743 T
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         1638 1 +     29742 T
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        11024 1 -    104932 T
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     5211 1 +      8497 T
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 145949 1 +    154973 T
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                160760 1 +    265003 T
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                   553 1 -     19904 C
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  144446 1 -    168139 T
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          19100 1 -    100666 T
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70766156 1 +  92629107 a
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75489215 1 +  98207768 a
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67555440 1 +  89017189 A
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74330393 1 +  97876770 a
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             11437 1 +     98495 A
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4423883 1 -  28371801 T
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     89584 1 -    117718 T
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               967395 1 +   8389877 T
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5019070 1 +   6462685 T
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3464976 1 -   3747815 T
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        10190 1 +     66751 T
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             4601 1 -      8794 G
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            118002 1 +    362372 T
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               8139 1 +     48152 T
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4484416 1 -  14209539 T
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3950564 1 -   4490290 T
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  48859 1 +     94413 T
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_220265                              65 1 +      1763 T
i Nomascus_annamensis.k141_220265                       C 0 C 0
s Nomascus_concolor.k141_226614                               858 1 -      5092 T
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_642452                            1641 1 +      2851 T
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             24576 1 -  18771707 T
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  2279 1 +      4512 T
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                30461 1 +   3668941 T
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65566600 1 -  95554990 T
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            3329 1 +      6470 T
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65668939 1 +  89412551 T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4995601 1 -  23139505 T
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3685132 1 +  10294119 T
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             679081 1 -   3126709 T
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1079242 1 +   1425656 C
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         36536 1 +     78940 C
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  124899 1 +    145789 G
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  36702 1 +     62360 G
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 I 10
s Orcinus_orca.KB316965.1                                 7224246 1 -   7562323 T
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              56922 1 -     66828 T
i Orycteropus_afer.OryAfe_flattened_line_13509          I 13409 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      307746 1 -    505867 T
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_321880                       38507 1 +     38679 T
i Otolemur_crassicaudatus.k141_321880                   C 0 N 0
s Otolemur_garnettii.GL873528.1                          18007934 1 -  38779656 t
i Otolemur_garnettii.GL873528.1                         C 0 I 295
s Ovis_aries.CM001582.2                                 134076801 1 - 275406953 C
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      78015 1 +    140051 C
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127574284 1 - 205426864 T
i Pan_paniscus.CM003386.1                               C 0 I 21
s Pan_troglodytes.CM009241.2                            120151437 1 - 196562556 T
i Pan_troglodytes.CM009241.2                            C 0 I 21
s Panthera_onca.PanOnc_flattened_line_1615                  33869 1 +    295523 T
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3637605 1 +  18214204 t
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5027278 1 -   6340057 T
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1065661 1 -   1292953 C
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188155873 1 - 188283584 T
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             4189 1 +      5367 T
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47513260 1 +  47705337 T
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 67237 1 -    104429 T
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    5770 1 +     14967 T
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 1630 1 -      7628 T
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    115323 1 -    135482 T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           4915 1 -     23713 t
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            24224 1 -     27972 t
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      43208 1 -     45160 T
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 I 723
s Peromyscus_maniculatus.KI615518.1                       4949936 1 -   8017169 G
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    12060 1 -     36578 T
i Petromus_typicus.PetTyp_scaffold_33007                C 0 I 1
s Phocoena_phocoena.PhoPho_flattened_line_11948            120853 1 -    122454 T
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1987485                           1658 1 -      5908 T
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       2282 1 -     17985 T
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            1649 1 +      7694 T
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26740127 1 +  26888534 T
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            97014 1 +    112873 T
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             43257 1 -     61926 T
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        24688 1 +     78826 T
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              8637 1 -     15800 T
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        11835 1 -     16101 T
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          5144 1 +      9673 T
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13474140 1 -  19735023 T
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           13046 1 -     31692 T
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           4933 1 +     21690 T
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       22479 1 +     44506 T
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        22691 1 +     67491 T
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      12930 1 -     98129 T
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     22530 1 +    147771 T
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        22785 1 -     23762 T
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          3251 1 -     55515 T
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         22604 1 +    152463 T
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                        321 1 -    119457 T
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         12326 1 +    134592 T
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          22914 1 -     75465 T
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              186810 1 -    373494 T
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19807458 1 +  19899266 T
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               5384 1 -     15069 T
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              5518 1 +     14865 T
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_467676                1191 1 -      1272 T
i Procavia_capensis.ProCapCap_scaffold_467676           N 0 I 21
s Prolemur_simus.MPIZ01000048.1                           6848183 1 +  12164890 T
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coronatus.k141_1353159                         3247 1 +     11805 T
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           42584 1 +     52369 T
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         34972 1 -     44753 T
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            16894 1 +     27322 T
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       16529 1 -     53241 T
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         38800 1 -     48185 T
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           33857 1 +     77221 G
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            3418 1 -     27784 T
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        246191 1 -    344369 T
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13245519 1 -  17261082 T
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             603474 1 -   3946241 T
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131533863 1 - 161321710 T
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             29502 1 +     56732 T
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6805993 1 +   6970761 T
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             5387 1 +     18040 T
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                15319 1 +     68503 C
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13915156 1 +  90463843 G
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1787355 1 +   2252614 T
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_1391695                           1615 1 -      1866 T
i Rhinopithecus_bieti.k119_1391695                      C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206377272 1 - 206558726 T
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44856172 1 -  45163003 T
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                18843 1 +    109198 T
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       7481 1 +     12214 C
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15672345 1 -  43202129 T
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        4262 1 +     34089 T
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              4203 1 -     60842 T
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              4298 1 +     67014 T
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              4276 1 +     60816 T
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 4213 1 -     76454 T
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17340938 1 -  30362882 T
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         20297 1 -     62485 T
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   31837 1 -    114521 T
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        2999 1 +     15331 T
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       8396 1 +     20762 T
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         118398 1 +    130994 T
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           37185 1 +     46263 T
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     30299 1 +     42640 T
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        13343 1 +     30600 T
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   99892 1 -    120886 G
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            18415 1 +    739146 T
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2239350 1 +   2842873 C
i Spermophilus_dauricus.KZ294190.1                      C 0 I 1
s Spilogale_gracilis.SpiGra_flattened_line_905             234312 1 -    276980 T
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            27128 1 +     62062 T
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189271398 1 + 218635234 T
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        14558 1 -  13920577 T
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               5583 1 -      6213 T
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               14258 1 +     45698 G
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      806424 1 +   1148477 T
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  57115 1 +     99546 T
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               26088 1 +     42269 T
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               59404 1 +     65473 T
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194007400 1 - 194193292 T
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             38884 1 -     47444 T
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 I 1
s Tolypeutes_matacus.TolMat_scaffold_269431                  5094 1 +      6782 T
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  135419 1 -    259118 T
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        26503 1 +     38948 T
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   20232 1 -     32910 T
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      1620 1 -     12939 T
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       1555 1 -     14244 T
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           42953 1 -     54611 T
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                         759 1 -     11566 T
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     2931 1 -     15592 T
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          1588 1 +     14371 T
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  51340 1 +     51589 T
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       14521 1 +     14732 T
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       4992 1 -     28054 T
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44659792 1 -  44834318 T
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       2096 1 +     13828 T
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   4705 1 +     90398 C
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16084434 1 +  31416278 T
i Trichechus_manatus.JH594618.1                         I 2381 C 0
s Tupaia_chinensis.KB320831.1                             2792460 1 -   3938065 G
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    4665 1 +     13056 G
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69312963 1 -  96451834 T
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                    884 1 +     10241 T
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6514329 1 +  28682327 T
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  4886 1 -     20643 T
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             24427 1 -     33872 T
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1524205 1 -   2331223 T
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                137839 1 -    281493 T
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       126462 1 -    134049 C
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        213807 1 -    227762 T
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     14555 1 -     20485 T
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           6455 1 -      8775 T
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Sorex_araneus.JH798170.1                               17750754 3364 -  27805282 I
e Erinaceus_europaeus.JH835290.1                         11531598 1064 +  16010500 I
e Oryctolagus_cuniculus.CM000803.1                      141875874 0 + 163896628 C
e Elephantulus_edwardii.JH947210.1                        7804622 10712 +  15467074 I
e Propithecus_coquerelli.NW_012147997.1                    667273 6500 -   2312742 I
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I
e Cavia_aperea.AVPZ01000278.1                            15786075 94 -  24422027 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               11409 21 +    209709 AAT-CGT----GTT-TTA-----------------A--------T-----AATG--TA-T
s Acinonyx_jubatus.LLWD01000356.1                         2033526 21 +   3721120 AAT-Agt----gtt-tta-----------------a--------t-----aata--ta-t
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    112164 21 -    189883 AAA-TGT----GAC-ATA-----------------A--------T-----GATG--CA-T
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10656841 21 +  23371972 AAT-AGT----GTT-TTA-----------------A--------T-----AATA--TC-T
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7094185 21 -  16596857 AGT-AGT----GTT-TTA-----------------G--------T-----AATA--TC-T
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   16467 21 -     22067 TAT-AGT----GGT-ATA-----------------A--------T-----AATA--TG-T
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                    893 21 -     60446 AAT-CGT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         1616 21 -     29318 AAT-CGT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                          551 21 +     38766 AAT-CGT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          1510 21 -     80423 AAT-CGT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             9803 23 -     18050 AAT-AGT----GTT-TTA-----------------A--------TTGTATAA-----A-T
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                 10896 23 -     11521 AAT-AGT----GTT-TTA-----------------A--------CTGTATAA-----A-T
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                             10480 23 -     21359 AAT-AGT----GTT-TTA-----------------A--------TTGTATAA-----A-T
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                  95 23 +      2129 AAT-AGT----GTT-TTA-----------------A--------CTGTATAA-----A-T
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          9779 23 -     10438 AAT-AGT----GTT-TTA-----------------A--------CTGTATAA-----A-T
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            6435 23 +      7047 AAT-AGT----GTT-TTA-----------------A--------CTGTATAA-----A-T
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             9715 23 +     10410 AAT-AGT----GTT-TTA-----------------A--------CTGTATAA-----A-T
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            3523 23 -      4927 AAT-AGT----GTT-TTA-----------------A--------TTGTATAA-----A-T
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3519660 21 +   4113121 AAA-GGA----GTT-TTA-----------------A--------T-----AGTA--TC-T
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      389866 17 -    631301 -AC-AGT----GTT-CTA-----------------A--------C-----A-----TC-T
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            30243 21 +     33004 AAA-GGA----GTT-TTA-----------------C--------T-----AATA--CT-T
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 62166 26 +     78111 AAG-AGT----GTT-TTA-----------------A--------TTGTATAATG--TA-T
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            5107 26 +     22701 AAT-AGT----GTT-TTA-----------------A--------TTGTATAATG--TA-T
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5749064 26 +   9889416 AAT-GGT----GTT-TTA-----------------A--------TTGTATAATG--TA-T
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             5651 26 -    104377 AAT-GGT----GTT-TTA-----------------A--------TTGTATAATG--TA-T
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               5653 26 +     23246 AAT-GGT----GTT-TTA-----------------A--------TTGTATAATG--TA-T
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     3282 21 +      5067 AAT-AAC----GGT-TTA-----------------A--------T-----AAAA--TG-T
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_587554                         520 21 +      9265 aat-aat----gtt-tca-----------------a--------t-----agtg--ta-t
i Arctocebus_calabarensis.k141_587554                   C 0 I 88
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 8277 17 -     29036 -AC-AGT----GCT-CTA-----------------A--------C-----A-----TC-T
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9538912 23 +  39197703 AAC-AGT----GTT-TTA-----------------A--------TTGTATAA-----A-T
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             60183 23 +     85812 AAC-AGT----GTT-TTA-----------------A--------TTGTATAA-----A-T
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                11195 23 +     89302 AAC-AGT----GTT-TTA-----------------A--------TTGTATAA-----A-T
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             15700 23 -     58268 AAC-AGT----GTT-TTA-----------------A--------TTGTATAA-----A-T
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             63691 23 +    119057 AAC-AGT----GTT-TTA-----------------A--------TTGTATAA-----A-T
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               5660 23 -     25888 AAC-AGT----GTT-TTA-----------------A--------TTGTATAA-----A-T
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 6325 21 -     16375 AAT-AAT----GTT-TCA-----------------A--------T-----AATG--TA-T
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              2645 21 +      2719 AAT-AAT----GTT-TCA-----------------A--------T-----AATG--TA-T
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26379684 21 +  51448160 AAT-ggc----att-tta-----------------a--------t-----aata--tc-t
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        4915 21 -     13118 AAT-Ggc----att-tta-----------------a--------t-----aata--tc-t
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   42723 21 -     72089 AAA-GGA----GTT-TTA-----------------A--------T-----AGTA--TC-T
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6559398 21 +   6870073 AAA-GGA----GTT-TTA-----------------A--------T-----AATA--TC-T
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138139502 21 - 161108492 AAA-GGA----GTT-TTA-----------------A--------T-----AATA--TC-T
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     572039 21 -    998990 AAA-GAA----GTT-TTA-----------------A--------T-----AATA--TC-T
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136295235 21 - 158972876 AAA-GGA----GTT-TTA-----------------A--------T-----AATA--TC-T
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1232318 21 -   1914593 AAA-GGA----GTT-TTA-----------------A--------T-----AATA--TC-T
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               113550 26 -    171031 AAT-AGT----GTT-TTA-----------------A--------TTGTATAATG--TA-T
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 12581 26 +    125063 AAT-AGT----GTT-TTA-----------------A--------TTGTATAATG--TA-T
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                14626 26 -    216513 AAT-AGT----GTT-TTA-----------------A--------TTGTATAATG--TA-T
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        7166 26 -    134917 AAT-AGT----GTT-TTA-----------------A--------TTGTATAATG--TA-T
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3219102 21 -   8989139 AAT-GGA----GTT-TCA-----------------A--------T-----AATA--TC-T
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           396804 21 -  15254737 AAT-GGA----GTT-TCA-----------------A--------T-----AATA--TC-T
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2972539 21 +   6889770 AAT-GGA----GTT-TCA-----------------A--------T-----AATA--TC-T
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11519000 21 +  39901454 AAT-AGT----GTT-TTA-----------------A--------T-----AATA--TC-T
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   14025 21 +     87036 AAT-AGT----GTT-TTA-----------------A--------T-----AATA--TC-T
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11265667 21 -  35597290 AAT-AGT----GTT-TTA-----------------A--------T-----AATA--TC-T
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11088201 21 +  39895921 AAT-AGT----GTT-TTA-----------------A--------T-----AATA--TC-T
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16455216 21 -  44759192 AAT-AGT----GTT-TTA-----------------A--------T-----AATA--TC-T
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21324736 21 + 157394656 AAA-GGA----GTT-TTA-----------------A--------T-----AGTA--TC-T
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135705963 21 - 157403528 AAA-GGA----GTT-TTA-----------------A--------T-----AGTA--TC-T
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          308607 21 +    345090 AAT-AGT----GTT-TTA-----------------A--------T-----AACT--TA-T
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               59070 17 +     67245 -AC-AGT----GCT-CTA-----------------A--------C-----A-----TC-T
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   30285 21 +     33760 AAC-AGT----GGT-TTA-----------------A--------T-----AATG--TA-T
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   158411 21 -    276539 AAT-GGC----ATT-TCA-----------------A--------T-----AATA--TC-T
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15786169  9 -  24422027 -----------------------------------N--------N-----NNNN--NN-N
i Cavia_aperea.AVPZ01000278.1                           I 94 C 0
s Cavia_porcellus.DS562889.1                             15798092 21 -  24440124 AAT-ACT----GGT-TTA-----------------G--------A-----AATA--TG-C
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       176283 21 +    436027 AAT-ACT----GGT-TTA-----------------G--------A-----AATA--TG-C
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18890395 26 -  29618158 AAT-AAT----GTT-TTA-----------------A--------TTGTATAATG--TA-T
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 7939 26 -     26817 AAT-AAT----GTT-TTA-----------------A--------TTGTATAATG--TA-T
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                12179 26 +     25043 AAT-AAT----GTT-TTA-----------------A--------TTGTATAATG--TA-T
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         7641 21 +     21754 AAT-AGT----GTT-TTA-----------------A--------T-----AATT--TA-T
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4363414 21 +   7569818 AAT-AGG----GTT-TTA-----------------A--------T-----AATA--TC-T
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         3171 21 -      9338 AAT-AGG----GTT-TTA-----------------A--------T-----AATA--TC-T
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6554838 21 +   6739814 AAT-CGT----GTT-TTA-----------------A--------T-----AACG--TA-T
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      26315 21 +     60454 AAT-CAT----GTT-TTA-----------------A--------T-----AACG--TA-T
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          1520 21 -     21101 AAT-CGT----GTT-TTA-----------------A--------T-----AACG--TA-T
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         58830 21 -    107033 AAT-CGT----GTT-TTA-----------------A--------T-----AACG--TA-T
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        1722 21 -     17608 AAT-TGT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          29217 21 +     30494 AAT-TGT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          58063 21 -     59240 AAT-CAT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          1764 21 +     16677 AAT-CGT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           23922 21 +     35983 AAT-CGT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11990450 21 +  12117833 AAT-TGT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46477208 21 +  46592721 AAT-CGT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      40759 21 -     45581 AAT-CGT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       1765 21 +     35577 AAT-TGT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        1541 21 -     25661 AAT-TGT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        1519 21 -     17744 AAT-CGT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        21135 21 +     37128 AAT-CGT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           2347 12 -      6963 AAT-GGT----GTT-TTA------------------------------------------
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 I 6
s Cheirogaleus_major.k141_1157592                           58611 21 -     68416 CAT-AGT----GTT-TCA-----------------A--------T-----AATG--TA-T
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            7655 21 +     13308 AAT-AGT----GTT-TCA-----------------A--------T-----AATG--TA-T
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             5196 26 -     18223 AAT-AGT----GTT-TTC-----------------A--------TTGTATAGTG--TA-A
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             22219 26 +     25473 AAT-AGT----GTT-TTC-----------------A--------TTGTATAGTG--TA-A
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           41254 26 +     57117 AAT-AGT----GTT-TTC-----------------A--------TCGTATAGTG--TA-A
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          45933 26 +     54541 AAT-AGT----GTT-TTC-----------------A--------TTGTATAGTG--TA-A
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15961319 21 +  43084221 AAT-ACT----CTT-TTA-----------------A--------T-----AATG--TA-T
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         70757 26 +    196370 AAT-AGT----GTT-TTA-----------------A--------TTGTATAATG--TA-T
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          14937 26 +     40510 AAT-AGT----GTT-TTA-----------------A--------TTGTATAATG--TA-T
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15138681 21 -  15256731 AAT-TGT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      33728 21 -     53260 AAT-TGT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101144292 21 + 101219884 AAT-TGT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                16029 21 -     21363 AAT-AGT----GTT-TTA-----------------G--------T-----GATG--TA-T
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           761336 21 +    964067 AAT-AGT----GTT-TTA-----------------G--------T-----GATG--TA-T
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10886058 21 +  10971483 AAT-CAT----GTT-TTA-----------------A--------T-----CATG--TA-T
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147664222 21 + 156195979 AAT-CAT----GTT-TTA-----------------A--------T-----CATG--TA-T
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            16207 21 +     23629 AAT-CAT----GTT-TTA-----------------A--------T-----CATG--TA-T
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60613159 20 +  78930452 aac-agt----att-tta-----------------a--------t-----aata--tc--
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         39236 21 -     40477 AAT-AGT----GTT-TTG-----------------A--------T-----AATA--TC-T
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 278119 21 -    399297 AAT-TGT----GAT-ATG-----------------A--------T-----GATG--CA-T
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53028783 38 +  72327488 AAT-Tgt----gat-atatatgcataatatatatga--------T-----GATG--TA-T
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_88140              1535 21 +     11655 TTC-CAT----GTA-AAA-----------------T--------T-----AGTA--TC-T
i Crocidura_indochinensis.CroInd_scaffold_88140         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            51546 21 -     70449 AAT-AGT----GTT-TTA-----------------A--------T-----AATA--TC-T
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  207731 21 -    956709 AAT-GGT----GGC-TTA-----------------A--------T-----AACG--TG-C
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 30306 13 -     67205 AAT-ATT----GTT-TGA-----------------A------------------------
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 I 5
s Cuniculus_paca.CunPac_flattened_line_16637                17337 22 +     26546 AAT-ACT----GGT-TTA----------------AA--------T-----AATG--TA-T
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             58423 21 -    236241 AAT-ACT----GGT-TTG-----------------A--------T-----AATG--TG-A
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          183221 12 -   6883506 AAT-AGT----GTT-TTA------------------------------------------
i Dasypus_novemcinctus.JH568778.1                       C 0 I 6
s Daubentonia_madagascariensis.ctg11                     16844470 21 +  31942871 GAT-AGT----GTT-TCA-----------------A--------T-----AATG--TA-T
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80036362 21 -  96802777 AAT-GGC----ATT-TTA-----------------A--------T-----AATA--TC-T
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18698342 17 -  18957592 -AC-AGT----GCT-CTA-----------------A--------C-----A-----TC-T
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 322066 21 +    993696 AAT-AGG----GTT-TTA-----------------A--------T-----AATA--TC-T
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   2716 21 +    151128 AAT-AGG----GTT-TTA-----------------A--------T-----AATA--TC-T
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   156576 21 +    228994 AAT-ACT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3655683  6 +   4240102 -----------------A-----------------A--------T-----AAT-------
i Dipodomys_ordii.KN672545.1                            I 5 I 251
s Dipodomys_stephensi.DipSte_scaffold_44365                 27316  6 +     28912 -----------------A-----------------A--------T-----ATT-------
i Dipodomys_stephensi.DipSte_scaffold_44365             I 5 I 251
s Dolichotis_patagonum.DolPat_scaffold_14102                35674 21 -     73477 AAT-ACT----GGT-TTA-----------------G--------T-----AATA--TG-C
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22997939 10 -  44670279 ggt-aga----att-t--------------------------------------------
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 11765 21 +     24177 AAT-AGT----GTT-TTA-----------------A--------T-----AATA--TC-T
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1491012 21 +   1727528 AAA-GGA----GTT-TTA-----------------A--------T-----AACA--TC-T
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        239348 21 -    369425 AAT-TGC----AAT-ATA-----------------A--------T-----GATG--CA-G
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           6461 21 -      7838 AAT-TGT----TAT-ATA-----------------A--------T-----GATG--CA-G
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85871704 21 +  99434291 AAT-AGC----ATT-TTA-----------------G--------C-----AATA--TC-T
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4703715 17 +   6522550 -AC-CAT----GTT-CTA-----------------A--------T------A----TT-T
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5852465 21 -   7175178 AAT-AGG----GTT-TTA-----------------A--------T-----AATA--TC-T
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13350968 21 +  41866177 AAT-AGG----GTT-TTA-----------------A--------T-----AATA--TC-T
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          12458 21 +     92910 AAT-AGG----GTT-TTA-----------------A--------T-----AATA--TC-T
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erythrocebus_patas.Contig8                             48770859 21 -  48907691 AAT-CAT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          314568 21 +    330699 AAT-GGC----ATT-TTA-----------------A--------T-----AATA--TC-T
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             61022 21 +     89355 AAT-GGC----ATT-TTA-----------------A--------T-----AATA--TC-T
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              4663 21 +     13586 AAT-AGT----GTT-TCA-----------------A--------T-----AATG--TA-T
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               4599 21 -      6809 AAT-AGT----GTT-TCA-----------------A--------T-----AATG--TA-T
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            11072 21 +     36558 AAT-AGT----ATT-TCA-----------------A--------T-----AATG--TA-T
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             7392 21 +     60246 AAT-AGT----GTT-TCA-----------------A--------T-----AATG--TA-T
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                10870 21 +    109717 AAT-AGT----GTT-TCA-----------------A--------T-----AATG--TA-T
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               15254 21 +     16540 AAT-AGT----GTT-TCA-----------------A--------T-----AATG--TA-T
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                15528 21 +     27497 AAT-AGT----GTT-TCA-----------------A--------T-----AATG--TA-T
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           17984 21 +     26808 AAT-AGT----GTT-TCA-----------------A--------T-----AATG--TA-T
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                32720 21 +     46535 AAT-AGT----GTT-TCA-----------------A--------T-----AATG--TA-T
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              15442 21 -     29447 AAT-AGT----GTT-TCA-----------------A--------T-----AATG--TA-T
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129892503 21 - 159252932 AAT-Agt----gtt-tta-----------------a--------t-----aata--ta-t
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129279572 21 - 158578461 AAT-Agt----gtt-tta-----------------a--------t-----aata--ta-t
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 20717 21 +     52776 AAT-AGT----GTT-TTA-----------------A--------T-----AATA--TA-T
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Galago_moholi.ctg555                                     210403 23 -    847004 aat-agt----gtt-tca-----------------a--------t-----aatgtata-t
i Galago_moholi.ctg555                                  C 0 I 88
s Galago_senegalensis.k141_964197                           12782 23 -     43889 aat-agt----gtt-tca-----------------a--------t-----aatgtata-t
i Galago_senegalensis.k141_964197                       C 0 I 88
s Galagoides_demidoff.k141_1769638                           9859 21 +     27357 cat-agt----gtt-tca-----------------a--------t-----aatg--ta-t
i Galagoides_demidoff.k141_1769638                      C 0 I 88
s Galeopterus_variegatus.GalVar_scaffold_354               155846 17 +    324696 AAT-AA-----GTT-TTA-----------------A--------T-----AATG------
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    180809 21 -    189561 AAA-GGA----GTT-TTA-----------------A--------T-----AATA--TC-T
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           12652 21 -     18683 AAT-AGT----ACT-TTA-----------------A--------C-----AATA--TG-T
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               4925 21 -     14630 AAT-TGT----GTT-TTA-----------------A--------T-----AATG--TG-T
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119652024 21 - 195582420 AAT-TGT----GTT-TTA-----------------A--------T-----AATG--TG-T
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   77197 21 +    118900 AAT-AGT----ACT-TTA-----------------A--------C-----AATA--TG-T
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         1442 21 +     10286 AAT-AGT----GTT-TCA-----------------A--------T-----AATG--TA-T
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_1254239                            9618 21 +      9690 AAT-AGT----GTT-TCA-----------------A--------T-----AATG--TA-T
i Hapalemur_gilberti.k141_1254239                       C 0 C 0
s Hapalemur_griseus.k141_1387522                             5248 21 +     56096 AAT-AGT----GTT-TCA-----------------A--------T-----AATG--TA-T
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        28498 21 -     42470 AAT-AGT----GTT-TCA-----------------A--------T-----AATG--TA-T
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        45121 21 -     54384 AAT-AGT----GTT-TCA-----------------A--------T-----AATG--TA-T
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              16751 21 +     53719 AAT-AGT----GTC-TTA-----------------A--------T-----AATA--TC-T
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                27008 21 -     91191 CAA-GGA----GTT-TTA-----------------A--------T-----AGTA--TC-T
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2550666  9 +  31725842 -----------------------------------A--------T-----AATG--TA-c
i Heterocephalus_glaber.JH602058.1                      I 1 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               60079 21 +     73687 AAT-AGT----ATG-TTA-----------------A--------T-----AATG--CA-A
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              146656 21 +    277961 AAC-AGA----GTT-TTA-----------------A--------T-----AATA--TC-T
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      277938 21 -    477199 AAT-AGT----GTT-TTA-----------------A--------G-----AATA--TC-T
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              7090 21 -      9143 AAT-AGT----ATT-TTA-----------------A--------G-----AATA--TT-T
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      4331 21 -   7690867 AAT-TGT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 16823 21 -     67322 AAT-AGT----GTT-TTA-----------------A--------T-----AATA--TC-T
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           18556 21 -    119109 CAT-ACT----GGT-TTA-----------------G--------T-----AATA--TG-C
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              4757 21 +      5897 AAT-TGT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_624065                               1621 21 +      2112 AAT-TGT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Hylobates_agilis.k141_624065                          C 0 C 0
s Hylobates_klossii.k141_466549                             11197 21 +     11537 AAT-TGT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14624302 21 -  25970782 AAT-TGT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            1558 21 -      2977 AAT-TGT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             33380 11 -     60944 tgt-ttt----gtt-tt-------------------------------------------
i Hylobates_pileatus_a.tarseq_592                         C 0 I 319
s Hystrix_cristata.HysCri_scaffold_50788                     5724 21 +     22540 AAT-ACT----GAT-TTA-----------------A--------T-----AATG--TA-C
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7125434 14 +  13083262 ------------CT-TTA-----------------A--------T-----AGAA--TG-T
i Ictidomys_tridecemlineatus.JH393315.1                 I 1 C 0
s Indri_indri.k141_4418183                                   1091 21 -      1457 AAT-AGT----GTT-TCA-----------------A--------T-----AATG--TA-T
i Indri_indri.k141_4418183                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               8562 21 +     17520 AAT-GGC----ATT-TTA-----------------A--------T-----AATA--TC-T
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8565477 21 +  11848649 AAC-AGA----AGT-ATA-----------------A--------C-----AATA--TG-T
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               23178 21 +     37189 AAT-GGC----ATT-TTA-----------------A--------T-----AATA--TC-T
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          49780 23 -    147782 AAT-AGT----GTT-TTA-----------------A--------TTGTATAA-----G-T
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   113806 17 -    115756 -AC-CAT----GTT-CTA-----------------A--------T------A----TC-T
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258406803 21 - 285822530 AAT-AGT----GTT-TCA-----------------A--------T-----AATG--TA-T
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        23557 21 +     39228 AAT-AGT----GTT-TCA-----------------A--------C-----AATG--TA-G
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            52944 21 +     63517 AAT-AGT----GTT-TCA-----------------A--------T-----AATG--TA-G
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        78200 21 +    116806 AAT-AGT----GTT-TCA-----------------A--------T-----AATG--TA-G
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     31196 21 -     33031 AAT-AGT----GTT-TCA-----------------A--------T-----AATG--TA-G
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3085512 21 -   3498232 AAT-AGA----GTT-TTA-----------------A--------T-----AATA--TC-T
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    12835 21 +     22452 AAT-AGT----GTT-TAA-----------------T--------T-----AATG--TG-T
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            135515 21 +   3060487 AAT-GGC----ATT-TTA-----------------A--------T-----AATA--TC-T
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19247924 21 +  19376315 AAT-CGT----GTT-TTA-----------------A--------T-----AACG--TA-T
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           10166 21 +     84689 AAT-TGT----GAT-TCA-----------------A--------c-----aatg--ca-t
i Loris_lydekkerianus.k141_550999                       C 0 I 87
s Loris_tardigradus.ctg97                                 3777915 21 +   6799190 AAT-TGT----GAT-TCA-----------------a--------c-----aatg--ca-t
i Loris_tardigradus.ctg97                               C 0 I 87
s Loxodonta_africana.GL010040.1                          20593778 21 -  62548349 AAT-AGT----GTC-TTA-----------------A--------T-----AAAG--CA-A
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11087657 21 +  39895028 AAT-AGT----GTT-TTA-----------------A--------T-----AATA--TC-T
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             19667 21 +     74745 AAT-TGT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12706123 21 +  12821369 AAT-TGT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                1768 21 -      3136 AAT-TGT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           46585 21 +     63263 AAT-TGT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                 1288 21 -      2568 AAT-TGT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 1874 21 -      7381 AAT-TAT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  45092 21 -     79256 AAT-TGT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196035200 21 + 196197964 AAT-TGT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11445368 21 +  11645122 AAT-TGT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   4039 21 -     46448 AAT-TGT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                1711 21 -     13212 AAT-TGT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 15392 21 -     55006 AAT-TGT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43840509 21 +  43892939 AAT-TGT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               16678 21 -     24607 AAT-TGT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               4044 21 -     27140 AAT-TGT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                701138 21 +    802869 AAT-AGT----GTT-TTC-----------------A--------T-----AATA--TC-T
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43437086 21 -  43563597 AAT-CGT----GTT-TTA-----------------A--------T-----AACG--TA-T
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4449912 21 -   4543643 AAT-CGT----GTT-TTA-----------------A--------T-----AACG--TA-T
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            145196 21 +    252755 aat-agt----att-tta-----------------a--------t-----aata--tg-t
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             35273 21 +     58827 Aat-agt----att-tta-----------------a--------t-----aata--tg-C
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36873276 14 +  64221397 ------------CT-TTA-----------------A--------T-----AGAA--TG-T
i Marmota_marmota.CZRN01000005.1                        I 1 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       63954 21 -    234502 AAT-AGA----GCT-TTA-----------------A--------T-----AATA--TC-T
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433              517 21 -     87323 AAT-AGC----ATT-TTA-----------------G--------C-----AATA--TC-T
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               12306 29 +     15977 AAT-TGT----GAC-ATA-----------------AATAATAGCT-----GATT--CA-T
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1046492 38 -  26018355 tat-tgt----gac-atatatgtgtaatatatataa--------t-----gAGT--CA-G
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Microcebus_murinus.CM007691.1                          16509826 21 +  47401472 AAT-AGT----GTT-TCA-----------------A--------T-----AATG--TA-T
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  33928 10 -     48017 GAT-AAC----ACA-T--------------------------------------------
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               22249 17 -     32043 -GC-AGT----GCT-CTA-----------------A--------C-----A-----TC-T
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22819647 21 -  98408828 AAT-TGT----GAT-ATA-----------------A--------T-----GGTG--CA-T
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8209242 17 +  10048721 -AT-AGT----GTT-CTA-----------------A--------T------A----TC-T
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            33895 17 +     45743 -AT-AGT----GTT-CTA-----------------A--------T------A----TC-T
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         1639 21 +     29742 AAT-CGT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        11025 21 -    104932 AAT-AGA----GTT-TTA-----------------A--------T-----AATA--TC-T
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     5212 21 +      8497 AAT-AGT----GTT-TCA-----------------A--------T-----AATG--TA-T
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 145950 21 +    154973 AAT-GGC----ATT-TTA-----------------A--------T-----AATA--TC-T
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                160761 21 +    265003 -AC-AGTGAGGGCT-CTA-----------------A--------C-----A-----TC-T
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                   554 21 -     19904 AAA-GGA----GTT-TTA-----------------A--------T-----AATA--TC-T
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  144447 21 -    168139 AAT-AGT----GTC-TTA-----------------A--------T-----AATA--TC-T
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          19101 14 -    100666 -AG-CG-------T-CTA-----------------A--------T------A----TC-T
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70766157 20 +  92629107 aaa--ct----gat-ata-----------------a--------t-----gatg--aa-t
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75489216 20 +  98207768 aaa--tt----gat-ata-----------------A--------T-----GATG--AA-T
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67555441 20 +  89017189 AAA--CT----GAT-ATa-----------------a--------t-----gatg--aa-t
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74330394 20 +  97876770 aaa--ct----gat-ata-----------------a--------t-----gatg--aa-t
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             11438 21 +     98495 AAT-AGT----GCT-TTA-----------------A--------C-----AATA--TA-T
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4423884 21 -  28371801 AAT-AGC----ATT-TTA-----------------G--------C-----AATA--TC-T
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     89585 20 -    117718 AAT-A-T----ATT-TTA-----------------A--------T-----AATG--TA-T
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               967396 17 +   8389877 -AC-CAT----GTT-CTA-----------------A--------T------A----TC-T
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5019071 17 +   6462685 -AC-CGT----GTT-CTA-----------------A--------T------A----TC-T
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3464977 17 -   3747815 -AC-CGT----GTT-CTA-----------------A--------T------A----TC-T
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        10191 17 +     66751 -AT-CGT----GTT-CTA-----------------A--------T------A----TC-T
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             4602 21 -      8794 AGT-AGT----GTC-TTA-----------------A--------T-----AATG--TG-T
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            118003 18 +    362372 AAT-AGT----AGT-ATA-----------------A--------T-----GATG------
i Nannospalax_galili.KL201303.1                         C 0 I 1
s Nasalis_larvatus.k141_153429                               8140 21 +     48152 AAT-CAT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4484417 21 -  14209539 AAT-AGA----GTT-TTA-----------------A--------T-----AATA--TC-T
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3950565 21 -   4490290 AAT-GGC----ATT-TTA-----------------A--------T-----AATA--TC-T
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  48860 18 +     94413 -AT-AGT----ACT-CTA-----------------A--------C-----AA----TC-T
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_220265                              66 21 +      1763 AAT-TGT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Nomascus_annamensis.k141_220265                       C 0 C 0
s Nomascus_concolor.k141_226614                               859 21 -      5092 AAT-TGT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_642452                            1642 21 +      2851 AAT-TGT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             24577 21 -  18771707 AAT-TGT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  2280 21 +      4512 AAT-TGT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                30462 21 +   3668941 AAT-AGT----GTT-TTA-----------------A--------T-----AATA--TC-T
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65566601 21 -  95554990 AAT-TGT----GTT-TCA-----------------A--------T-----AATG--TA-t
i Nycticebus_bengalensis.LG16                           C 0 I 87
s Nycticebus_coucang.k141_2051882                            3330 21 +      6470 AAT-TGT----GTT-TCA-----------------A--------T-----AATG--Ta-t
i Nycticebus_coucang.k141_2051882                       C 0 I 87
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65668940 21 +  89412551 AAT-TAT----GTT-TCa-----------------a--------t-----aatg--ta-t
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 I 87
s Ochotona_princeps.JH802095.1                            4995602 21 -  23139505 GAC-AAT----AAG-ATA-----------------A--------T-----AATG--TT-T
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3685133 21 +  10294119 AAT-ATT----GTT-TGA-----------------A--------T-----AATG--TA-G
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             679082 21 -   3126709 AAT-AGA----GTT-CTA-----------------A--------T-----AATA--CC-T
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1079243 21 +   1425656 AAA-GGA----GTT-TTA-----------------A--------T-----AATA--TC-G
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         36537 21 +     78940 AAA-GGA----GTT-TTA-----------------A--------T-----AATA--TC-T
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  124900 21 +    145789 AAT-TGC----GAT-ATA-----------------A--------T-----GATG--CA-T
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  36713  8 +     62360 --------------------------------------------T-----GACG--CA-T
i Onychomys_torridus.OnyTor_scaffold_12578              I 10 C 0
s Orcinus_orca.KB316965.1                                 7224247 21 -   7562323 AAT-GGC----ATT-TTA-----------------A--------T-----AATA--TC-T
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              56923 21 -     66828 AAT-AGT----GTT-TTA-----------------A--------T-----AATG--TA-A
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141875874 20 + 163896628 -AT-AGT----GTT-TAA-----------------T--------T-----AATG--TG-T
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      307747 21 -    505867 AAT-AGT----GTT-TTA-----------------A--------T-----AATA--TC-T
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                         257 21 -     53940 aat-agt----gtt-tca-----------------c--------t-----aatg--ta-t
i Otolemur_crassicaudatus.k141_505435                   N 0 I 56
s Otolemur_garnettii.GL873528.1                          18008230 21 -  38779656 aat-agt----GTT-TCA-----------------A--------T-----AATG--TA-T
i Otolemur_garnettii.GL873528.1                         I 295 I 56
s Ovis_aries.CM001582.2                                 134076802 21 - 275406953 CAA-GGA----GTT-TTA-----------------A--------T-----AGTA--TC-T
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      78016 21 +    140051 CAA-GGA----GTT-TTA-----------------A--------T-----AGTA--TC-T
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.AJFE02000033.1                                 479 21 -      1012 AAT-CGT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Pan_paniscus.AJFE02000033.1                           I 161 I 212
s Pan_troglodytes.NBAG03003562.1                            12616 21 +     18198 AAT-CGT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Pan_troglodytes.NBAG03003562.1                        I 42 n 21
s Panthera_onca.PanOnc_flattened_line_1615                  33870 21 +    295523 AAT-AGT----GTT-TTA-----------------A--------T-----AATA--TA-T
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3637606 21 +  18214204 aat-aat----gtt-tta-----------------a--------t-----aata--ta-t
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5027279 21 -   6340057 AAT-Agt----gtt-tta-----------------a--------t-----aata--ta-t
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1065662 21 -   1292953 AAA-GGA----GTT-TTA-----------------A--------T-----AGTA--TC-T
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188155874 21 - 188283584 AAT-CGT----GTT-TTA-----------------A--------T-----AACG--TA-T
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             4190 21 +      5367 AAT-CGT----GTT-TTA-----------------A--------T-----AACG--TA-T
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47513261 21 +  47705337 AAT-CGT----GTT-TTA-----------------A--------T-----AACG--TA-T
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 67238 21 -    104429 AAT-CGT----GTT-TTA-----------------A--------T-----AACG--TA-T
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    5771 21 +     14967 AAT-CGT----GTT-TTA-----------------A--------T-----AACG--TA-T
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 1631 21 -      7628 AAT-CGT----GTT-TTA-----------------A--------T-----AACG--TA-T
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    115324 21 -    135482 AAC-AGT----GTT-TTA-----------------A--------T-----AATA--CC-T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           4916 21 -     23713 aat-agt----gtt-tca-----------------a--------c-----aatg--ta-t
i Perodicticus_ibeanus.k141_117958                      C 0 I 88
s Perodicticus_potto.k141_713187                            24225 21 -     27972 aat-agt----gtt-tca-----------------a--------c-----aatg--ta-t
i Perodicticus_potto.k141_713187                        C 0 I 88
s Perognathus_longimembris.PerPac_flattened_line_22291      43932  6 -     45160 -----------------a-----------------a--------a-----agt-------
i Perognathus_longimembris.PerPac_flattened_line_22291  I 723 I 249
s Peromyscus_maniculatus.KI615518.1                       4949937 21 -   8017169 AAT-TGT----GAC-ACA-----------------A--------T-----GATG--CA-T
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    12062  9 -     36578 -----------------------------------A--------T-----AATG--TA-G
i Petromus_typicus.PetTyp_scaffold_33007                I 1 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            120854 21 -    122454 AAT-GGC----ATT-TTA-----------------A--------T-----AATA--TC-T
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1987485                           1659 21 -      5908 AAT-CAT----GTT-TTA-----------------A--------T-----CATG--TA-T
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       2283 21 -     17985 AAT-CAT----GTT-TTA-----------------A--------T-----CATG--TA-T
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            1650 21 +      7694 AAT-CAT----GTT-TTA-----------------A--------T-----CATG--TA-T
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26740128 21 +  26888534 AAT-CAT----GTT-TTA-----------------A--------T-----CATG--TA-T
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            97015 17 +    112873 -AC-CAT----GTT-CTA-----------------A--------T------A----TT-T
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             43258 26 -     61926 AAT-AGT----GTT-TTA-----------------A--------TTGTATAATG--TA-T
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        24689 26 +     78826 AAT-AGT----GTT-TTA-----------------A--------TTGTATAATG--TA-T
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              8638 26 -     15800 AAT-AGT----GTT-TTA-----------------A--------TTGTATAATG--TA-T
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        11836 26 -     16101 AAT-AGT----GTT-TTA-----------------A--------TTGTATAATG--TA-T
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          5145 26 +      9673 AAT-AGT----GTT-TTA-----------------A--------TTGTATAATG--TA-T
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13474141 26 -  19735023 AAT-AGT----GAT-TTA-----------------A--------TTGTATAATG--TA-T
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           13047 26 -     31692 AAT-AGT----GTT-TTA-----------------A--------TTGTATAATG--TA-T
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           4934 21 +     21690 TAT-GGC----ATT-TTA-----------------A--------T-----AATA--TC-T
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       22480 26 +     44506 AAT-AGT----GTT-TTC-----------------A--------TTGTAAAATG--TA-A
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        22692 26 +     67491 AAT-AGT----GTT-TTC-----------------A--------TTGTAAAATG--TA-A
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      12931 26 -     98129 AAT-AGT----GTT-TTC-----------------A--------TTGTAAAATG--TA-A
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     22531 26 +    147771 AAT-AGT----GTT-TTC-----------------A--------TTGTAAAATG--TA-A
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        22786 26 -     23762 AAT-AGT----GTT-TTC-----------------A--------TTGTAAAATG--TA-A
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          3252 26 -     55515 AAT-AGT----GTT-TTC-----------------A--------TTGTAAAATG--TA-A
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         22605 26 +    152463 AAT-AGT----GTT-TTC-----------------A--------TTGTAAAATG--TA-A
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                        322 26 -    119457 AAT-AGT----GTT-TTC-----------------A--------TTGTAAAATG--TA-A
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         12327 26 +    134592 AAT-AGT----GTT-TTC-----------------A--------TTGTAAAATG--TA-A
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          22915 26 -     75465 AAT-AGT----GTT-TTC-----------------A--------TTGTAAAATG--TA-A
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              186811 21 -    373494 AAT-TGT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19807459 21 +  19899266 AAT-TGT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               5385 21 -     15069 AAT-CAT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              5519 21 +     14865 AAT-CAT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                1170 21 -      9567 AAT-AGT----ATG-TTA-----------------A--------T-----AATG--CA-A
i Procavia_capensis.ProCapCap_scaffold_149274           n 21 I 37
s Prolemur_simus.MPIZ01000048.1                           6848184 21 +  12164890 AAT-AGT----GTT-TCA-----------------A--------T-----AATG--TA-T
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coronatus.k141_1353159                         3248 20 +     11805 AAT--GT----GTT-TCA-----------------A--------C-----AATG--TA-T
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           42585 21 +     52369 AAT-AGT----GTT-TCA-----------------A--------T-----AATG--TA-T
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         34973 21 -     44753 AAT-AGT----GTT-TCA-----------------A--------T-----AATG--TA-T
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            16895 21 +     27322 AAT-AGT----GTT-TCA-----------------A--------T-----AATG--TA-T
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       16530 22 -     53241 AAT-AGT----GTT-TCA-----------------A--------T-----AATG--TATT
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         38801 20 -     48185 AAT--GT----GTT-TCA-----------------A--------C-----AATG--TA-T
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           33858 29 +     77221 AAT-TGT----GAC-ATA-----------------AATAATAGCT-----GATT--CA-T
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            3419 17 -     27784 -AC-CGT----GCT-CTA-----------------A--------C-----A-----TC-A
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        246192 21 -    344369 AAT-AGC----ATT-TTA-----------------G--------C-----AATA--TC-T
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13245520 21 -  17261082 AAT-AGT----GTT-TTA-----------------A--------T-----AATA--TC-T
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             603475 21 -   3946241 AAT-AGT----GTT-TTA-----------------A--------T-----AATA--TC-T
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131533864 21 - 161321710 AAT-Agt----gtt-tta-----------------a--------t-----aata--ta-t
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             29503 21 +     56732 AAT-CAT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6805994 21 +   6970761 AAT-CAT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             5388 21 +     18040 AAT-CAT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                15320 21 +     68503 AAA-GGA----GTT-TTA-----------------A--------T-----AATA--TC-T
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13915157 22 +  90463843 AAC-TGT----AATAATA-----------------A--------G-----GATG--AA-T
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1787356 21 +   2252614 AAT-AGT----GTT-TTA-----------------A--------G-----AATA--TC-C
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_1391695                           1616 21 -      1866 AAT-CAT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Rhinopithecus_bieti.k119_1391695                      C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206377273 21 - 206558726 AAT-CGT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44856173 21 -  45163003 AAT-CAT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                18844 21 +    109198 AAT-AGT----GTT-TTA-----------------A--------T-----AATA--TC-T
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       7482 21 +     12214 AAA-GGA----GTT-TTA-----------------A--------T-----AGTA--TC-T
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15672346 26 -  43202129 AAT-GGT----GTT-TTA-----------------A--------TTGTATAATG--TA-T
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        4263 26 +     34089 AAT-GGT----GTT-TTA-----------------A--------TTGTATAATG--TA-T
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              4204 26 -     60842 AAT-GGT----GTT-TTA-----------------A--------TTGTATAATG--TA-T
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              4299 26 +     67014 AAT-GGT----GTT-TTA-----------------A--------TTGTATAATG--TA-T
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              4277 26 +     60816 AAT-GGT----GTT-TTA-----------------A--------TTGTATAATG--TA-T
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 4214 26 -     76454 AAT-GGT----GTT-TTA-----------------A--------TTGTATAATG--TA-T
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17340939 26 -  30362882 AAT-AAT----GTT-TTA-----------------A--------TTGTATAATG--TA-T
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         20298 26 -     62485 AAT-AAT----GTT-TTA-----------------A--------TTGTATAATG--TA-T
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   31838 20 -    114521 AAT-AGT----GTT-TTA-----------------A--------T-----ACTA--TC--
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        3000 21 +     15331 AAT-CAT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       8397 21 +     20762 AAT-CAT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         118399 21 +    130994 AAT-CAT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           37186 21 +     46263 AAT-CAT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     30300 21 +     42640 AAT-CAT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        13344 21 +     30600 AAT-CAT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   99893 21 -    120886 AAT-TGC----CAC-ATT-----------------A--------A-----AATA--AA-T
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            18416 21 +    739146 AAT-AAT----GTT-TTA-----------------A--------T-----AATA--TC-T
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2239352 14 +   2842873 ------------CT-TTA-----------------A--------T-----AGAA--TG-T
i Spermophilus_dauricus.KZ294190.1                      I 1 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             234313 21 -    276980 AAT-AGT----GTT-TTG-----------------A--------T-----AATA--TC-T
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            27129 21 +     62062 AAT-AGT----GTC-TTA-----------------A--------T-----AATA--TC-T
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189271399 21 + 218635234 AAT-GGC----ATT-TTA-----------------A--------T-----AATA--TC-T
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        14559 21 -  13920577 AAT-TGT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               5584 17 -      6213 -AT-AGT----GTT-CTA-----------------A--------T------A----TC-T
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               14259 21 +     45698 AGT-AGT----GTT-TTA-----------------A--------T-----AATG--TG-T
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      806425 18 +   1148477 AAT-AGG----GTT-TTA-----------------A--------T-----A-----TC-T
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  57116 18 +     99546 AAT-AGG----GTT-TTA-----------------A--------T-----A-----TC-T
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               26089 21 +     42269 AAT-AGT----GTT-TTA-----------------A--------T-----AATT--TA-T
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               59405 21 +     65473 AAT-AGT----GTT-TTA-----------------A--------T-----AATT--TA-T
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194007401 21 - 194193292 AAT-CGT----GTT-TTA-----------------A--------T-----AACG--TA-T
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             38886  9 -     47444 -----------------------------------A--------T-----AATG--TA-T
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         I 1 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  5095 12 +      6782 AAT-AGT----GTT-TTA------------------------------------------
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 I 6
s Tonatia_saurophila.TonSau_scaffold_3334                  135420 17 -    259118 -AC-AGT----GCT-CTA-----------------A--------C-----A-----TC-T
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        26504 21 +     38948 AAT-CAT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   20233 21 -     32910 AAT-CAC----GTT-TTA-----------------A--------T-----AATG--TA-T
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      1621 21 -     12939 AAT-CAT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       1556 21 -     14244 AAT-CAT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           42954 21 -     54611 AAT-CAT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                         760 21 -     11566 AAT-CAT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     2932 21 -     15592 AAT-CAT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          1589 21 +     14371 AAT-CAT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  51341 21 +     51589 AAT-CAT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       14522 21 +     14732 AAT-CAT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       4993 21 -     28054 AAT-CAT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44659793 21 -  44834318 AAT-CAT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       2097 21 +     13828 AAT-CAT----GTT-TTA-----------------A--------T-----AATG--TA-T
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   4706 22 +     90398 AAA-GGA----GTTTTTA-----------------A--------T-----AATA--TC-T
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16084435 21 +  31416278 AAT-GGT----GTC-TTA-----------------A--------T-----AATG--CA-A
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2792461 11 -   3938065 AAC-AGT----ATG-TT-------------------------------------------
i Tupaia_chinensis.KB320831.1                           C 0 I 7
s Tupaia_tana.TupTan_flattened_line_68454                    4666 11 +     13056 AAT-AGT----ATG-TT-------------------------------------------
i Tupaia_tana.TupTan_flattened_line_68454               C 0 I 7
s Tursiops_truncatus.MRVK01000923.1                      69312964 21 -  96451834 AAT-GGC----ATT-TTA-----------------A--------T-----AATA--TC-T
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                    885 17 +     10241 AAT-AGT----GTT-TTA-----------------A--------T-----AAT-------
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6514330 21 +  28682327 AAT-AGT----GTT-TTA-----------------A--------T-----AATA--TC-T
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  4887 21 -     20643 AAT-AGT----GTT-TCA-----------------A--------T-----AATG--TA-T
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             24428 21 -     33872 AAT-AGT----GTT-TCA-----------------A--------T-----AATG--TA-T
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1524206 21 -   2331223 AAT-GGA----GTT-TCA-----------------A--------T-----AATA--TC-T
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                137840 21 -    281493 AAT-AGT----GTT-TTA-----------------A--------T-----AATA--TC-T
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       126463 21 -    134049 AGT-CAT----GGT-TTA-----------------A--------T-----AAAA--TG-T
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        213808 21 -    227762 AAT-AGA----GTT-CTA-----------------A--------T-----AATA--CC-T
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     14556 21 -     20485 CAT-AGT----GGT-ATA-----------------A--------T-----AACT--TG-T
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           6456 21 -      8775 AAT-GGC----ATT-TTA-----------------A--------T-----AATA--TC-T
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Sorex_araneus.JH798170.1                               17750754 3364 -  27805282 I
e Erinaceus_europaeus.JH835290.1                         11531598 1064 +  16010500 I
e Elephantulus_edwardii.JH947210.1                        7804622 10712 +  15467074 I
e Propithecus_coquerelli.NW_012147997.1                    667273 6500 -   2312742 I
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               11430 5 +    209709 AA-TTG
s Acinonyx_jubatus.LLWD01000356.1                         2033547 5 +   3721120 aa-ttg
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    112185 2 -    189883 AA----
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10656862 5 +  23371972 AG-TTG
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7094206 5 -  16596857 AA-TTG
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   16488 6 -     22067 ACAATA
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                    914 5 -     60446 AA-TTG
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         1637 5 -     29318 AA-TTG
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                          572 5 +     38766 AA-TTG
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          1531 5 -     80423 AA-TTG
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             9826 5 -     18050 AA-TTG
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                 10919 5 -     11521 AA-TTG
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                             10503 5 -     21359 AA-TTG
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                 118 5 +      2129 AA-TTG
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          9802 5 -     10438 AA-TTG
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            6458 5 +      7047 AA-TTG
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             9738 5 +     10410 AA-TTG
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            3546 5 -      4927 AA-TTG
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3519681 5 +   4113121 AA-CTG
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      389883 5 -    631301 CA-TTG
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            30264 5 +     33004 AA-TTG
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 62192 5 +     78111 AA-CTG
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            5133 5 +     22701 AA-CTG
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5749090 5 +   9889416 AA-CTG
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             5677 5 -    104377 AA-CTG
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               5679 5 +     23246 AA-CTG
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     3303 5 +      5067 AA-CTA
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_587554                         629 5 +      9265 aa-ctt
i Arctocebus_calabarensis.k141_587554                   I 88 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 8294 5 -     29036 CA-TTG
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9538935 5 +  39197703 AA-TTG
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             60206 5 +     85812 AA-TTG
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                11218 5 +     89302 AA-TTG
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             15723 5 -     58268 AA-TTG
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             63714 5 +    119057 AA-TTG
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               5683 5 -     25888 AA-TTG
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 6346 5 -     16375 AA-TTG
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              2666 5 +      2719 AA-TTG
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26379705 5 +  51448160 aa-CTG
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        4936 5 -     13118 aa-CTG
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   42744 5 -     72089 AA-CTG
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6559419 5 +   6870073 AA-TTG
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138139523 5 - 161108492 AA-TTG
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     572060 5 -    998990 AA-TTG
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136295256 5 - 158972876 AA-TTG
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1232339 5 -   1914593 AA-TTG
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               113576 5 -    171031 AA-TTG
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 12607 5 +    125063 AA-TTG
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                14652 5 -    216513 AA-TTG
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        7192 5 -    134917 AA-TTG
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3219123 5 -   8989139 GA-TTG
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           396825 5 -  15254737 GA-TTG
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2972560 5 +   6889770 GA-TTG
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11519021 5 +  39901454 AA-TTG
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   14046 5 +     87036 AA-TTG
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11265688 5 -  35597290 AA-TTG
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11088222 5 +  39895921 AA-TTG
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16455237 5 -  44759192 AA-TTG
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21324757 5 + 157394656 AA-CTG
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135705984 5 - 157403528 AA-CTG
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          308628 5 +    345090 AA-TTG
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               59087 5 +     67245 CA-TTG
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   30306 5 +     33760 AA-TTG
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   158432 5 -    276539 GA-TTG
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15786178 5 -  24422027 NN-NNN
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15798113 5 -  24440124 Aa-ttg
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       176304 5 +    436027 AA-TTG
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18890421 5 -  29618158 AA-CTG
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 7965 5 -     26817 AA-CTG
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                12205 5 +     25043 AA-CTG
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         7662 5 +     21754 AA-TTG
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4363435 5 +   7569818 AA-TTG
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         3192 5 -      9338 AA-TTG
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6554859 5 +   6739814 AA-TTG
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      26336 5 +     60454 AA-TTG
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          1541 5 -     21101 AA-TTG
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         58851 5 -    107033 AA-TTG
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        1743 5 -     17608 AA-TTG
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          29238 5 +     30494 AA-TTG
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          58084 5 -     59240 AA-TTG
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          1785 5 +     16677 AA-TTG
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           23943 5 +     35983 AA-TTG
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11990471 5 +  12117833 AA-TTG
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46477229 5 +  46592721 AA-TTG
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      40780 5 -     45581 AA-TTG
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       1786 5 +     35577 AA-TTG
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        1562 5 -     25661 AA-TTG
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        1540 5 -     17744 AA-TTG
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        21156 5 +     37128 AA-TTG
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           2365 5 -      6963 AA-TTG
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      I 6 C 0
s Cheirogaleus_major.k141_1157592                           58632 5 -     68416 AA-TTG
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            7676 5 +     13308 AA-TTG
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             5222 5 -     18223 AA-TTG
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             22245 5 +     25473 AA-TTG
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           41280 5 +     57117 AA-TTG
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          45959 5 +     54541 AA-TTG
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15961340 5 +  43084221 AA-TTA
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         70783 5 +    196370 AA-TTG
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          14963 5 +     40510 AA-TTG
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15138702 5 -  15256731 AA-TTG
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      33749 5 -     53260 AA-TTG
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101144313 5 + 101219884 AA-TTG
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                16050 5 -     21363 AA-CTG
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           761357 5 +    964067 AA-CTG
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10886079 5 +  10971483 AA-TTG
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147664243 5 + 156195979 AA-TTG
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            16228 5 +     23629 AA-TTG
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60613179 5 +  78930452 aa-tTG
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         39257 5 -     40477 AA-TTG
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 278140 2 -    399297 AA----
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53028821 2 +  72327488 AA----
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_88140              1556 4 +     11655 AA--TT
i Crocidura_indochinensis.CroInd_scaffold_88140         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            51567 5 -     70449 AA-TTT
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  207752 5 -    956709 CT-TTC
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 30324 5 -     67205 AA-TTA
i Ctenomys_sociabilis.CteSoc_scaffold_19489             I 5 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                17359 5 +     26546 AA-TTA
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             58444 5 -    236241 GA-TTA
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          183239 5 -   6883506 AA-CTG
i Dasypus_novemcinctus.JH568778.1                       I 6 C 0
s Daubentonia_madagascariensis.ctg11                     16844491 5 +  31942871 AA-TTG
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80036383 5 -  96802777 AA-CTC
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18698359 5 -  18957592 CA-TTG
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 322087 5 +    993696 AA-TTG
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   2737 5 +    151128 AA-TTG
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   156597 5 +    228994 AA-TTA
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3655940 4 +   4240102 -GT-TG
i Dipodomys_ordii.KN672545.1                            I 251 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 27573 4 +     28912 -GT-TG
i Dipodomys_stephensi.DipSte_scaffold_44365             I 251 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                35695 5 -     73477 AA-TTA
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Eidolon_helvum.KE772537.1                                 11786 5 +     24177 AA-CTT
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1491033 5 +   1727528 AA-TTG
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        239369 2 -    369425 AA----
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           6482 2 -      7838 AA----
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85871725 5 +  99434291 AA-TTG
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4703732 5 +   6522550 AA-TGG
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5852486 5 -   7175178 AA-TTG
i Equus_asinus.JREZ01000062.1                           C 0 I 52
s Equus_caballus.CM000402.2                              13350989 5 +  41866177 AA-TTG
i Equus_caballus.CM000402.2                             C 0 I 52
s Equus_przewalskii.ATBW01073585.1                          12479 5 +     92910 AA-TTG
i Equus_przewalskii.ATBW01073585.1                      C 0 I 52
s Erythrocebus_patas.Contig8                             48770880 5 -  48907691 AA-TTG
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          314589 5 +    330699 AA-CTG
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             61043 5 +     89355 AA-CTG
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              4684 5 +     13586 AA-TTG
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               4620 5 -      6809 AA-TTG
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            11093 5 +     36558 AA-TTG
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             7413 5 +     60246 AA-TTG
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                10891 5 +    109717 AA-TTG
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               15275 5 +     16540 AA-TTG
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                15549 5 +     27497 AA-TTG
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           18005 5 +     26808 AA-TTG
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                32741 5 +     46535 AA-TTG
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              15463 5 -     29447 AA-TTG
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129892524 5 - 159252932 aa-ttg
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129279593 5 - 158578461 aa-ttg
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 20738 5 +     52776 CA-TTG
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Galago_moholi.ctg555                                     210514 5 -    847004 aa-atg
i Galago_moholi.ctg555                                  I 88 C 0
s Galago_senegalensis.k141_964197                           12893 5 -     43889 aa-atg
i Galago_senegalensis.k141_964197                       I 88 C 0
s Galagoides_demidoff.k141_1769638                           9968 5 +     27357 aa-ctg
i Galagoides_demidoff.k141_1769638                      I 88 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    180830 5 -    189561 AA-TTG
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           12673 5 -     18683 AA-TTG
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               4946 5 -     14630 AA-TTG
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119652045 5 - 195582420 AA-TTG
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   77218 5 +    118900 AA-TTG
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         1463 5 +     10286 AA-TTG
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_1254239                            9639 5 +      9690 AA-TTG
i Hapalemur_gilberti.k141_1254239                       C 0 C 0
s Hapalemur_griseus.k141_1387522                             5269 5 +     56096 AA-TTG
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        28519 5 -     42470 AA-TTG
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        45142 5 -     54384 AA-TTG
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              16772 5 +     53719 AA-TTT
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                27029 5 -     91191 AA-CTG
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2550675 5 +  31725842 aa-tta
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               60100 5 +     73687 AA-TGT
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              146677 5 +    277961 AA-TTG
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      277959 5 -    477199 AA-ctg
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              7111 5 -      9143 AA-CTG
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      4352 5 -   7690867 AA-TTG
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 16844 5 -     67322 AA-TTT
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hylobates_abbotti.k141_493872                              4778 5 +      5897 AA-TTG
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_624065                               1642 5 +      2112 AA-TTG
i Hylobates_agilis.k141_624065                          C 0 C 0
s Hylobates_klossii.k141_466549                             11218 5 +     11537 AA-TTG
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14624323 5 -  25970782 AA-TTG
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            1579 5 -      2977 AA-TTG
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     5745 5 +     22540 AA-TTA
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7125448 5 +  13083262 AA-TTG
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_4418183                                   1112 5 -      1457 AA-TCA
i Indri_indri.k141_4418183                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               8583 5 +     17520 AA-CTG
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8565498 6 +  11848649 ACAATA
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               23199 5 +     37189 AG-CTG
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          49803 5 -    147782 AA-TTG
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   113823 5 -    115756 AA-TGG
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258406824 5 - 285822530 AA-TTG
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        23578 5 +     39228 AA-TCG
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            52965 5 +     63517 AA-TTG
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        78221 5 +    116806 AA-TCA
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     31217 5 -     33031 AA-TCG
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3085533 5 -   3498232 AA-TTG
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    12856 5 +     22452 AG-TTG
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            135536 5 +   3060487 AA-CTG
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19247945 5 +  19376315 AA-TTG
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           10274 5 +     84689 aa-ctg
i Loris_lydekkerianus.k141_550999                       I 87 C 0
s Loris_tardigradus.ctg97                                 3778023 5 +   6799190 aa-ctg
i Loris_tardigradus.ctg97                               I 87 C 0
s Loxodonta_africana.GL010040.1                          20593799 5 -  62548349 AA-TTT
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11087678 5 +  39895028 AA-TTA
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             19688 5 +     74745 AA-TTG
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12706144 5 +  12821369 AA-TTG
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                1789 5 -      3136 AA-TTG
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           46606 5 +     63263 AA-TTG
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                 1309 5 -      2568 AA-TTG
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 1895 5 -      7381 AA-TTG
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  45113 5 -     79256 AA-TTG
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196035221 5 + 196197964 AA-TTG
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11445389 5 +  11645122 AA-TTG
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   4060 5 -     46448 AA-TTG
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                1732 5 -     13212 AA-TTG
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 15413 5 -     55006 AA-TTG
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43840530 5 +  43892939 AA-TTG
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               16699 5 -     24607 AA-TTG
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               4065 5 -     27140 AA-TTG
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                701159 5 +    802869 AA-TTG
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43437107 5 -  43563597 AA-TTG
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4449933 5 -   4543643 AA-TTG
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            145217 1 +    252755 a-----
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             35294 1 +     58827 A-----
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36873290 5 +  64221397 AA-TTG
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       63975 5 -    234502 AC-TTG
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433              538 5 -     87323 AA-TTG
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               12335 2 +     15977 AA----
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1046530 2 -  26018355 AA----
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Microcebus_murinus.CM007691.1                          16509847 5 +  47401472 AA-TTG
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               22266 5 -     32043 CA-TTG
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22819668 2 -  98408828 AA----
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8209259 5 +  10048721 AA-CTG
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            33912 5 +     45743 AA-CTG
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         1660 5 +     29742 AA-TTG
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        11046 5 -    104932 AA-TTG
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     5233 5 +      8497 AA-TTG
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 145971 5 +    154973 AA-CTC
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                160782 5 +    265003 CA-TAA
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                   575 5 -     19904 AA-TTG
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  144468 5 -    168139 AA-TTT
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          19115 5 -    100666 AA-TTG
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70766177 2 +  92629107 aa----
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75489236 2 +  98207768 AA----
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67555461 2 +  89017189 aa----
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74330414 2 +  97876770 aa----
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             11459 5 +     98495 AA-TGA
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4423905 5 -  28371801 AA-TTG
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     89605 5 -    117718 AA-TTA
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               967413 5 +   8389877 AA-CTG
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5019088 5 +   6462685 AA-CTG
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3464994 5 -   3747815 AA-CTG
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        10208 5 +     66751 AA-TTG
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             4623 5 -      8794 AA-TTG
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            118022 2 +    362372 AA----
i Nannospalax_galili.KL201303.1                         I 1 C 0
s Nasalis_larvatus.k141_153429                               8161 5 +     48152 AA-TTG
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4484438 5 -  14209539 AA-TTG
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3950586 5 -   4490290 AA-CTC
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  48878 5 +     94413 CA-TTG
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_220265                              87 5 +      1763 AA-TTG
i Nomascus_annamensis.k141_220265                       C 0 C 0
s Nomascus_concolor.k141_226614                               880 5 -      5092 AA-TTG
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_642452                            1663 5 +      2851 AA-TTG
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             24598 5 -  18771707 AA-TTG
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  2301 5 +      4512 AA-TTG
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                30483 5 +   3668941 AA-TTG
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65566709 5 -  95554990 aa-ctg
i Nycticebus_bengalensis.LG16                           I 87 C 0
s Nycticebus_coucang.k141_2051882                            3438 5 +      6470 aa-ctg
i Nycticebus_coucang.k141_2051882                       I 87 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65669048 5 +  89412551 aa-ctg
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     I 87 C 0
s Ochotona_princeps.JH802095.1                            4995623 5 -  23139505 AT-TTG
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3685154 5 +  10294119 AA-TTA
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             679103 5 -   3126709 AA-TTG
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1079264 5 +   1425656 AA-TTG
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         36558 5 +     78940 AA-TTG
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  124921 2 +    145789 AA----
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  36721 2 +     62360 AA----
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7224268 5 -   7562323 AA-CTC
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              56944 5 -     66828 AA-TTC
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141875894 5 + 163896628 AG-TTG
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      307768 5 -    505867 AA-TTG
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                         334 5 -     53940 AA-CCG
i Otolemur_crassicaudatus.k141_505435                   I 56 C 0
s Otolemur_garnettii.GL873528.1                          18008307 5 -  38779656 AA-CCG
i Otolemur_garnettii.GL873528.1                         I 56 C 0
s Ovis_aries.CM001582.2                                 134076823 5 - 275406953 AA-CTG
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      78037 5 +    140051 AA-CTG
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127574306 5 - 205426864 AA-TTG
i Pan_paniscus.CM003386.1                               I 21 C 0
s Pan_troglodytes.CM009241.2                            120151459 5 - 196562556 AA-TTG
i Pan_troglodytes.CM009241.2                            I 21 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  33891 5 +    295523 AA-TTG
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3637627 5 +  18214204 aa-ttg
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5027300 5 -   6340057 aa-ttg
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1065683 5 -   1292953 AA-CTG
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188155895 5 - 188283584 AA-TTG
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             4211 5 +      5367 AA-TTG
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47513282 5 +  47705337 AA-TTG
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 67259 5 -    104429 AA-TTG
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    5792 5 +     14967 AA-TTG
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 1652 5 -      7628 AA-TTG
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    115345 5 -    135482 AA-TTG
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           5025 5 -     23713 aa-ctg
i Perodicticus_ibeanus.k141_117958                      I 88 C 0
s Perodicticus_potto.k141_713187                            24334 5 -     27972 aa-ctg
i Perodicticus_potto.k141_713187                        I 88 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      44187 4 -     45160 -ga-tg
i Perognathus_longimembris.PerPac_flattened_line_22291  I 249 C 0
s Peromyscus_maniculatus.KI615518.1                       4949958 2 -   8017169 AA----
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    12071 5 -     36578 AG-TTA
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            120875 5 -    122454 GA-CTC
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1987485                           1680 5 -      5908 AA-TTG
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       2304 5 -     17985 AA-TTG
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            1671 5 +      7694 AA-TTG
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26740149 5 +  26888534 AA-TTG
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            97032 5 +    112873 AA-TGA
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             43284 5 -     61926 AA-TTG
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        24715 5 +     78826 AA-TTG
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              8664 5 -     15800 AA-TTG
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        11862 5 -     16101 AA-TTG
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          5171 5 +      9673 AA-TTG
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13474167 5 -  19735023 AA-TTG
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           13073 5 -     31692 AA-TTG
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           4955 5 +     21690 AA-CTG
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       22506 5 +     44506 AA-TTG
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        22718 5 +     67491 AA-TTG
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      12957 5 -     98129 AA-TTG
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     22557 5 +    147771 AA-TTG
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        22812 5 -     23762 AA-TTG
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          3278 5 -     55515 AA-TTG
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         22631 5 +    152463 AA-TTG
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                        348 5 -    119457 AA-TTG
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         12353 5 +    134592 AA-TTG
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          22941 5 -     75465 AA-TTG
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              186832 5 -    373494 AA-TTG
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19807480 5 +  19899266 AA-TTG
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               5406 5 -     15069 AA-TTG
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              5540 5 +     14865 AA-TTG
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_467676                1213 5 -      1272 AA-TGT
i Procavia_capensis.ProCapCap_scaffold_467676           I 21 C 0
s Prolemur_simus.MPIZ01000048.1                           6848205 5 +  12164890 AA-TTG
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coronatus.k141_1353159                         3268 5 +     11805 AA-TCG
i Propithecus_coronatus.k141_1353159                    C 0 I 3
s Propithecus_diadema.k141_577245                           42606 5 +     52369 AA-TCA
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         34994 5 -     44753 AA-TCA
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            16916 5 +     27322 AA-TCA
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       16552 5 -     53241 AA-TCA
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         38821 5 -     48185 AA-TCG
i Propithecus_verreauxi.k141_158021                     C 0 I 3
s Psammomys_obesus.NESX01026517.1                           33887 2 +     77221 AA----
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            3436 4 -     27784 CA-T-G
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        246213 5 -    344369 AA-TTG
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13245541 5 -  17261082 AA-TTG
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             603496 5 -   3946241 AA-TTG
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131533885 5 - 161321710 aa-ttg
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             29524 5 +     56732 AA-TTG
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6806015 5 +   6970761 AA-TTG
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             5409 5 +     18040 AA-TTG
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                15341 5 +     68503 AA-TTG
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13915179 2 +  90463843 AA----
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1787377 5 +   2252614 GA-TGA
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_1391695                           1637 5 -      1866 AA-TTG
i Rhinopithecus_bieti.k119_1391695                      C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206377294 5 - 206558726 AA-TTG
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44856194 5 -  45163003 AA-TTG
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                18865 5 +    109198 AA-TTG
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       7503 5 +     12214 AA-CTG
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15672372 5 -  43202129 AA-CTG
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        4289 5 +     34089 AA-CTG
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              4230 5 -     60842 AA-CTG
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              4325 5 +     67014 AA-CTG
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              4303 5 +     60816 AA-CTG
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 4240 5 -     76454 AA-CTG
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17340965 5 -  30362882 AA-CTG
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         20324 5 -     62485 AA-CTG
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   31858 5 -    114521 TA-TTG
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        3021 5 +     15331 AA-TTG
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       8418 5 +     20762 AA-TTG
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         118420 5 +    130994 AA-TTG
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           37207 5 +     46263 AA-TTG
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     30321 5 +     42640 AA-TTG
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        13365 5 +     30600 AA-TTG
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   99914 2 -    120886 AA----
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            18437 5 +    739146 AA-TTG
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2239366 5 +   2842873 AA-TTG
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             234334 5 -    276980 AA-TTG
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            27150 5 +     62062 AA-TTT
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189271420 5 + 218635234 AG-TTG
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        14580 5 -  13920577 AA-TTG
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               5601 5 -      6213 AA-TTG
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               14280 5 +     45698 AA-TTG
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      806443 5 +   1148477 AA-TTG
i Tapirus_indicus.TapInd_scaffold_176                   C 0 I 52
s Tapirus_terrestris.TapTer_scaffold_14939                  57134 5 +     99546 AA-TTG
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 I 52
s Tarsius_lariang.k141_609102                               26110 5 +     42269 AA-TTG
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               59426 5 +     65473 AA-TTG
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194007422 5 - 194193292 AA-TTG
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             38895 5 -     47444 AG-TTA
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  5113 5 +      6782 AT-TTG
i Tolypeutes_matacus.TolMat_scaffold_269431             I 6 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  135437 5 -    259118 CA-TTG
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        26525 5 +     38948 AA-TTG
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   20254 5 -     32910 AA-TTG
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      1642 5 -     12939 AA-TTG
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       1577 5 -     14244 AA-TTG
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           42975 5 -     54611 AA-TTG
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                         781 5 -     11566 AA-TTG
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     2953 5 -     15592 AA-TTG
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          1610 5 +     14371 AA-TTG
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  51362 5 +     51589 AA-TTG
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       14543 5 +     14732 AA-TTG
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       5014 5 -     28054 AA-TTG
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44659814 5 -  44834318 AA-TTG
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       2118 5 +     13828 AA-TTG
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   4728 5 +     90398 AA-TTG
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16084456 5 +  31416278 AA-TTT
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2792479 5 -   3938065 AA-CTG
i Tupaia_chinensis.KB320831.1                           I 7 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    4684 5 +     13056 AA-CTG
i Tupaia_tana.TupTan_flattened_line_68454               I 7 C 0
s Tursiops_truncatus.MRVK01000923.1                      69312985 5 -  96451834 AA-CTC
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                    902 5 +     10241 AA-TTG
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6514351 5 +  28682327 AG-TTG
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  4908 5 -     20643 AA-TTG
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             24449 5 -     33872 AA-TTG
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1524227 5 -   2331223 GA-TTG
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                137861 5 -    281493 AA-TTG
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       126484 5 -    134049 TA-TTG
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        213829 5 -    227762 AA-TTG
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     14577 6 -     20485 ACAATA
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           6477 5 -      8775 AA-CTG
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Sorex_araneus.JH798170.1                               17750754 3364 -  27805282 I
e Erinaceus_europaeus.JH835290.1                         11531598 1064 +  16010500 I
e Microgale_talazaci.MicTal_scaffold_34660                  33938 0 -     48017 C
e Elephantulus_edwardii.JH947210.1                        7804622 10712 +  15467074 I
e Echinops_telfairi.JH980316.1                           22997949 0 -  44670279 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           18577 0 -    119109 C
e Hylobates_pileatus_a.tarseq_592                             33391 319 -     60944 I
e Galeopterus_variegatus.GalVar_scaffold_354               155863 0 +    324696 C
e Propithecus_coquerelli.NW_012147997.1                    667273 6500 -   2312742 I
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               11435 12 +    209709 AAT---ACAT---TAAC--A
s Acinonyx_jubatus.LLWD01000356.1                         2033552 15 +   3721120 aatttaacat---taac--a
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    112187 12 -    189883 AAT---ACAT---TGCT--T
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10656867 12 +  23371972 AAT---ACAT---TAAC--A
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7094211 12 -  16596857 AAT---ACAT---TAGC--A
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   16494 15 -     22067 CAT---GTATGTACAAT--A
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                    919 12 -     60446 AAT---ACAT---TACC--A
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         1642 12 -     29318 AAT---ACAT---TACC--A
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                          577 12 +     38766 AAT---ACAT---TACC--A
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          1536 12 -     80423 AAT---ACAT---TACC--A
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             9831 12 -     18050 AAT---ACAT---TAAC--A
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                 10924 12 -     11521 AAT---ACAT---TAAC--A
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                             10508 12 -     21359 AAT---ACAT---TAAC--A
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                 123 12 +      2129 AAT---ACAT---TAAC--A
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          9807 12 -     10438 AAT---ACAT---TAAC--A
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            6463 12 +      7047 AAT---ACAT---TAAC--A
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             9743 12 +     10410 AAT---ACAT---TAAC--A
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            3551 12 -      4927 AAT---ACAT---TAAC--A
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3519686 12 +   4113121 AAC---ACAT---TCAC--A
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      389888 12 -    631301 AAT---ATAT---TAAC--A
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            30269 12 +     33004 AAT---ACAT---TCAC--A
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 62197 12 +     78111 AAT---ACAT---TGAC--A
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            5138 12 +     22701 AAT---ACAT---TGAC--A
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5749095 12 +   9889416 AAT---ACAT---TGAC--A
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             5682 12 -    104377 AAT---ACAT---TGAC--A
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               5684 12 +     23246 AAT---ACAT---TGAC--A
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     3308 12 +      5067 AAT---ATGT---AAAT--A
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_587554                         634 12 +      9265 aat---acat---tgac--a
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 8299 12 -     29036 AAT---ACAC---TAAC--A
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9538940 12 +  39197703 AAT---ACAT---TAAC--A
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             60211 12 +     85812 AAT---ACAT---TAAC--A
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                11223 12 +     89302 AAT---ACAT---TAAC--A
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             15728 12 -     58268 AAT---ACAT---TAAC--A
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             63719 12 +    119057 AAT---ACAT---TAAC--A
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               5688 12 -     25888 AAT---ACAT---TAAC--A
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 6351 12 -     16375 AAT---ACAT---TAAC--A
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              2671 12 +      2719 AAT---ACAT---TAAC--A
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26379710 12 +  51448160 AAT---ACAT---TCAC--A
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        4941 12 -     13118 AAT---ACAT---TCAC--A
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   42749 12 -     72089 AAT---ACAT---TCAC--A
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6559424 12 +   6870073 AAT---ACAT---TCAC--A
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138139528 12 - 161108492 AAT---ACAT---TCAC--A
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     572065 12 -    998990 AAT---ACAT---TCAC--A
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136295261 12 - 158972876 AAT---ACAT---TCAC--A
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1232344 12 -   1914593 AAT---ACAT---TTAC--A
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               113581 12 -    171031 AAT---ACAT---TAAC--A
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 12612 12 +    125063 AAT---ACAT---TAAC--A
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                14657 12 -    216513 AAT---ACAT---TAAC--A
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        7197 12 -    134917 AAT---ACAT---TAAC--A
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3219128 12 -   8989139 AAT---ACAT---TCAC--A
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           396830 12 -  15254737 AAT---ACAT---TCAC--A
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2972565 12 +   6889770 AAT---ACAT---TCAC--A
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11519026 12 +  39901454 AAT---ACAT---TAAC--A
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   14051 12 +     87036 AAT---ACAT---TAAC--A
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11265693 12 -  35597290 AAT---ACAT---TAAC--A
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11088227 12 +  39895921 AAT---ACAT---TAAC--A
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16455242 12 -  44759192 AAT---ACAT---TAAC--A
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21324762 12 + 157394656 AAC---ACAT---TCAC--A
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135705989 12 - 157403528 AAC---ACAT---TCAC--A
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          308633 12 +    345090 ACT---ACAT---TGAC--A
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               59092 12 +     67245 GAT---ATAT---TAAC--A
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   30311 14 +     33760 AAT---GTTTCT-CATA--A
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   158437 12 -    276539 AAT---GCAT---TAAC--A
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15786183 12 -  24422027 NNN---NNNN---NNNN--N
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15798118 12 -  24440124 aat---ataa---caaa--a
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       176309 12 +    436027 AAT---ATAA---CAAA--A
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18890426 12 -  29618158 AAT---ACAT---TAAC--A
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 7970 12 -     26817 AAT---ACAT---TAAC--A
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                12210 12 +     25043 AAT---ACAT---TAAC--A
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         7667 12 +     21754 ACT---ACAT---TAAC--A
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4363440 12 +   7569818 AGT---GCAT---TAAC--A
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         3197 12 -      9338 AGT---GCAT---TAAC--A
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6554864 12 +   6739814 AAT---ACAT---TAAC--A
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      26341 12 +     60454 AAT---ACAT---TAAC--A
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          1546 12 -     21101 AAT---ACAT---TAAC--A
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         58856 12 -    107033 AAT---ACAT---TAAC--A
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        1748 12 -     17608 AAT---ATAT---TACC--T
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          29243 12 +     30494 AAT---ATAT---TACC--T
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          58089 12 -     59240 AAT---ACAT---TACC--A
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          1790 12 +     16677 AAT---ATAT---TACC--T
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           23948 12 +     35983 AAT---ATAT---TACC--T
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11990476 12 +  12117833 AAT---ATAT---TACC--T
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46477234 12 +  46592721 AAT---ATAT---TACC--T
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      40785 12 -     45581 AAT---ATAT---TACC--T
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       1791 12 +     35577 AAT---ATAT---TACC--T
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        1567 12 -     25661 AAT---ATAT---TACC--T
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        1545 12 -     17744 AAT---ATAT---TACC--T
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        21161 12 +     37128 AAT---ACAT---TACC--A
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           2370 12 -      6963 ATT---CCAT---TAAC--A
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           58637 12 -     68416 AAT---ACAT---TAAC--A
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            7681 12 +     13308 AAT---ACAT---TAAC--A
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             5227 12 -     18223 AAT---ACAT---TAAC--A
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             22250 12 +     25473 AAT---ACAT---TAAC--A
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           41285 12 +     57117 AAT---ACAT---TAAC--A
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          45964 12 +     54541 AAT---ACAT---TAAC--A
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15961345 12 +  43084221 AGT---ACAC---TAAA--A
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         70788 12 +    196370 AAT---ACAT---TAAC--A
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          14968 12 +     40510 AAT---ACAT---TAAC--A
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15138707 12 -  15256731 AAT---ACAT---TACC--A
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      33754 12 -     53260 AAT---ACAT---TACC--A
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101144318 12 + 101219884 AAT---ACAT---TACC--A
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                16055 12 -     21363 AGT---CCAT---TAAC--A
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           761362 12 +    964067 AGT---CCAT---TAAC--A
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10886084 12 +  10971483 AAT---ACAT---TAAC--A
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147664248 12 + 156195979 AAT---ACAT---TAAC--A
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            16233 12 +     23629 AAT---ACAT---TAAC--A
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60613184 12 +  78930452 AAT---ATAC---TGAT--A
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         39262 12 -     40477 AAT---ACAT---TAAC--A
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 278142 10 -    399297 --T---ATAT---TAGT--T
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53028823 12 +  72327488 AAT---ACAT---TAGT--T
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_88140              1560 12 +     11655 AAT---ATGT---TAAT--A
i Crocidura_indochinensis.CroInd_scaffold_88140         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            51572 12 -     70449 AAT---ACAT---CAAC--A
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  207757 12 -    956709 AAT---ATAT---CAAA--A
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 30329 12 -     67205 AAT---ATAA---CAAA--A
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                17364 12 +     26546 AAT---ATAA---CAAA--A
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             58449 12 -    236241 AAT---ATAA---CAAA--A
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          183244 12 -   6883506 ATT---CCAT---TAAC--A
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16844496 12 +  31942871 AAT---ACAT---TAAC--A
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80036388 12 -  96802777 AAT---ACAT---TCAC--A
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18698364 12 -  18957592 AAT---ATAT---TAAC--A
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 322092 12 +    993696 AAC---GCAT---TAAC--A
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   2742 12 +    151128 AGT---GCAT---TAAC--A
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   156602 12 +    228994 TAC---ATCC---CAAA--G
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3655944 14 +   4240102 AAG---GAAACT-CCCT--A
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 27577 14 +     28912 AAG---GAAACT-CCCT--A
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                35700 12 -     73477 AAT---ATAA---CAAA--A
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Eidolon_helvum.KE772537.1                                 11791 12 +     24177 AAT---ACAT---TAGC--A
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1491038 12 +   1727528 AAT---ACAT---TCAC--A
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        239371 11 -    369425 -AT---ACAT---TATC--T
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           6484 11 -      7838 -AT---ACAT---TATT--T
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85871730 12 +  99434291 AAT---ACAT---TAAC--A
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4703737 12 +   6522550 AAT---ACAT---TAAC--A
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5852543 12 -   7175178 aat---aCAT---TAAC--A
i Equus_asinus.JREZ01000062.1                           I 52 C 0
s Equus_caballus.CM000402.2                              13351046 12 +  41866177 aat---aCAT---TAAC--A
i Equus_caballus.CM000402.2                             I 52 C 0
s Equus_przewalskii.ATBW01073585.1                          12536 12 +     92910 aat---aCAT---TAAC--A
i Equus_przewalskii.ATBW01073585.1                      I 52 C 0
s Erinaceus_europaeus.JH835290.1                         11532662 12 +  16010500 aat---atat---gaat--a
i Erinaceus_europaeus.JH835290.1                        I 1064 C 0
s Erythrocebus_patas.Contig8                             48770885 12 -  48907691 AAT---ACAT---TACC--A
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          314594 12 +    330699 AAT---ACAT---TCAC--A
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             61048 12 +     89355 AAT---ACAT---TCAC--A
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              4689 12 +     13586 AAT---ACAT---TAAC--A
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               4625 12 -      6809 AAT---ACAT---TAAC--A
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            11098 12 +     36558 AAT---ACAT---TAAC--A
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             7418 12 +     60246 AAT---ACAT---TAAC--A
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                10896 12 +    109717 AAT---ACAT---TAAC--A
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               15280 12 +     16540 AAT---ACAT---TAAC--A
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                15554 12 +     27497 AAT---ACAT---TAAC--A
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           18010 12 +     26808 AAT---ACAT---TAAC--A
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                32746 12 +     46535 AAT---ACAT---TAAC--A
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              15468 12 -     29447 AAT---ACAT---TAAC--A
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129892529 15 - 159252932 aaTTTAACAT---TAAC--A
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129279598 15 - 158578461 aatttaacat---taac--a
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 20743 15 +     52776 AATTTAACAT---TAAC--A
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Galago_moholi.ctg555                                     210519 12 -    847004 aat---acat---taac--a
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           12898 12 -     43889 aat---acat---taac--a
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           9973 12 +     27357 aat---acat---taac--a
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               155863  7 +    324696 AAT---CC--------C--A
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    180835 12 -    189561 AAT---ACAT---TCAC--A
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           12678 12 -     18683 AAT---AAAT---CAAT--A
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               4951 12 -     14630 AAT---ACAT---TAAC--A
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119652050 12 - 195582420 AAT---ACAT---TAAC--A
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   77223 12 +    118900 AAT---ATAT---CAAT--A
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         1468 12 +     10286 AAT---ACAT---TAAC--A
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_1254239                            9644 12 +      9690 AAT---ACAT---TAAC--A
i Hapalemur_gilberti.k141_1254239                       C 0 C 0
s Hapalemur_griseus.k141_1387522                             5274 12 +     56096 AAT---ACAT---TAAC--A
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        28524 12 -     42470 AAT---ACAT---TAAC--A
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        45147 12 -     54384 AAT---ACAT---TAAC--A
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              16777 12 +     53719 AAT---ACAA---CAAC--A
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                27034 12 -     91191 AAC---ACAT---TGAC--A
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2550680 12 +  31725842 aat---atat---caaa--a
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               60105 12 +     73687 AGC---ATAG---TAAC--A
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              146682 12 +    277961 AAG---ATAT---TCAC--A
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      277964 10 -    477199 aat---acat---tat----
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              7116 12 -      9143 AAT---ACAT---TAAC--A
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      4357 12 -   7690867 AAT---ACAT---TAAC--A
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 16849 12 -     67322 AAT---ACAT---TAAC--A
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hylobates_abbotti.k141_493872                              4783 12 +      5897 AAT---ACAT---TAAC--A
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_624065                               1647 12 +      2112 AAT---ACAT---TAAC--A
i Hylobates_agilis.k141_624065                          C 0 C 0
s Hylobates_klossii.k141_466549                             11223 12 +     11537 AAT---ACAT---TAAC--A
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14624328 12 -  25970782 AAT---ACAT---TAAC--A
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            1584 12 -      2977 AAT---ACAT---TAAC--A
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     5750 12 +     22540 AAT---ATAT---CAAA--A
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7125453 12 +  13083262 AAT---ACAT---CAAT--A
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_4418183                                   1117 12 -      1457 AAT---ACAT---TAAC--A
i Indri_indri.k141_4418183                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               8588 12 +     17520 AAT---ACAT---TCAC--A
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8565504 15 +  11848649 AAT---GTATGTACAAT--A
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               23204 12 +     37189 AAT---ACAT---TCAC--A
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          49808 12 -    147782 AAT---ACAT---TAAC--A
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   113828 12 -    115756 AAT---GCAT---TAAC--A
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258406829 12 - 285822530 AAT---ACAC---TAAC--A
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        23583 12 +     39228 AAT---ACAT---TAAC--A
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            52970 12 +     63517 AAT---ACAT---TAAC--A
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        78226 12 +    116806 AAT---ACAT---TAAC--A
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     31222 12 -     33031 AAT---ACAT---TAAC--A
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3085538 12 -   3498232 AAT---ACAT---TAAC--A
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    12861 12 +     22452 AAT---ACAT---TAAC--A
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            135541 12 +   3060487 AAT---ACAT---TCAC--A
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19247950 12 +  19376315 GAT---ACAT---TAAC--A
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           10279 12 +     84689 aat---atat---taac--a
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3778028 12 +   6799190 aat---atat---taac--a
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20593804 12 -  62548349 AGT---ATAT---TAAC--A
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11087683 12 +  39895028 AAT---ACAT---TAAC--A
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             19693 12 +     74745 AAT---ACAT---TAAC--A
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12706149 12 +  12821369 AAT---ACAT---TAAC--A
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                1794 12 -      3136 AAT---ACAT---TAAC--A
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           46611 12 +     63263 AAT---ACAT---TAAC--A
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                 1314 12 -      2568 AAT---ACAT---TAAC--A
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 1900 12 -      7381 AAT---ACAT---TAAC--A
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  45118 12 -     79256 AAT---ACAT---TAAC--A
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196035226 12 + 196197964 AAT---ACAT---TAAC--A
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11445394 12 +  11645122 AAT---ACAT---TAAC--A
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   4065 12 -     46448 AAT---ACAT---TAAC--A
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                1737 12 -     13212 AAT---ACAT---TAAC--A
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 15418 12 -     55006 AAT---ACAT---TAAC--A
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43840535 12 +  43892939 AAT---ACAT---TAAC--A
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               16704 12 -     24607 AAT---ACAT---TAAC--A
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               4070 12 -     27140 AAT---ACAT---TAAC--A
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                701164 12 +    802869 AAT---ACAT---TAGC--A
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43437112 12 -  43563597 AAT---ACAT---TAAC--A
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4449938 12 -   4543643 AAT---ACAT---TAAC--A
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            145218 11 +    252755 -at---aCAT---TACC--A
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             35295 11 +     58827 -AT---ACAT---TACC--A
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36873295 12 +  64221397 AAT---ACAT---CAAT--A
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       63980 12 -    234502 AAT---ACAT---TAAC--A
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433              543 12 -     87323 AAT---ACAT---TAAC--A
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               12337 12 +     15977 AAT---GCAT---TAGT--T
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1046532 12 -  26018355 AAT---ACAT---TAGT--T
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Microcebus_murinus.CM007691.1                          16509852 12 +  47401472 AAT---ACAT---TAAC--A
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               22271 12 -     32043 AAT---ACAT---CAAC--G
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22819670 11 -  98408828 -AT---ACAT---TAGT--T
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8209264 12 +  10048721 AAT---ATAT---TAAC--A
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            33917 12 +     45743 AAT---ATAT---TAAC--A
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         1665 12 +     29742 AAT---ACAT---TACC--T
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        11051 12 -    104932 AAT---ACAT---TAAC--A
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     5238 12 +      8497 AAT---ACAT---TAAC--A
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 145976 12 +    154973 AAT---ACAT---TCAC--A
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                160787 12 +    265003 AAT---ACAT---TAAC--A
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                   580 12 -     19904 AAT---ACAC---TCAT--A
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  144473 12 -    168139 AAT---ACAA---CAAC--A
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          19120 12 -    100666 AAT---ACAT---TAAC--A
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70766179 10 +  92629107 aat---acat---tag----
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75489238 10 +  98207768 AAC---ACat---tag----
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67555463 12 +  89017189 aat---atat---taga--t
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74330416 10 +  97876770 aat---acat---tag----
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             11464 12 +     98495 AGT---ATAT---CAAT--A
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4423910 12 -  28371801 AAT---ACAT---TAAC--A
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     89610 11 -    117718 A-T---ATAA---CAAA--A
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               967418 12 +   8389877 AAT---ACAT---TAAC--A
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5019093 12 +   6462685 AAT---ACAT---TAAC--A
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3464999 12 -   3747815 AAT---ACAT---TAAC--A
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        10213 12 +     66751 AAT---ACAT---TAAC--A
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             4628 12 -      8794 AGT---CCAT---CAAC--A
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            118024 12 +    362372 AAT---GCAT---TAAT--A
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               8166 12 +     48152 AAT---ACAT---TAAC--A
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4484443 12 -  14209539 AAT---ACAT---TAAC--A
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3950591 12 -   4490290 AAT---ACAT---TCAC--A
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  48883 12 +     94413 AAT---ACAT---TAAC--A
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_220265                              92 12 +      1763 AAT---ACAT---TAAC--A
i Nomascus_annamensis.k141_220265                       C 0 C 0
s Nomascus_concolor.k141_226614                               885 12 -      5092 AAT---ACAT---TAAC--A
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_642452                            1668 12 +      2851 AAT---ACAT---TAAC--A
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             24603 12 -  18771707 AAT---ACAT---TAAC--A
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  2306 12 +      4512 AAT---ACAT---TAAC--A
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                30488 12 +   3668941 AAT---ACAT---TAAC--A
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65566714 12 -  95554990 aat---atat---taac--a
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            3443 12 +      6470 aat---atat---taac--a
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65669053 12 +  89412551 aat---atat---taac--a
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4995628 11 -  23139505 -AT---ATAT---TAAC--A
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3685159 12 +  10294119 AGt---acaa---caaa--a
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             679108 12 -   3126709 AAT---ACAT---TAAC--A
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1079269 12 +   1425656 AAT---ACAT---TCAC--A
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         36563 12 +     78940 AAT---ACAT---TCAC--A
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  124923 11 +    145789 -AT---ACAT---TAGT--T
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  36723 12 +     62360 AAT---ACGT---TAGT--T
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7224273 12 -   7562323 AAT---ACAT---TCAC--A
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              56949 12 -     66828 ATT---ATAT---CGcc--a
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 I 155
s Oryctolagus_cuniculus.CM000803.1                      141875899 12 + 163896628 AAT---ACAT---TAAC--A
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      307773 12 -    505867 AAT---ACAT---TAAC--A
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                         339 12 -     53940 AAT---ACAT---TAAC--A
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18008312 12 -  38779656 AAT---ACAT---TAAC--A
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134076828 12 - 275406953 AAC---ACAT---TGAC--A
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      78042 12 +    140051 AAC---ACAT---TGAC--A
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127574311 12 - 205426864 AAT---ACAT---TAAC--A
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120151464 12 - 196562556 AAT---ACAT---TAAC--A
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  33896 15 +    295523 AATTTAACAT---TAAC--A
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3637632 15 +  18214204 aatttaacat---taac--a
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5027305 15 -   6340057 aatttaacat---taac--a
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1065688 12 -   1292953 AAC---ACAT---TCAC--A
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188155900 12 - 188283584 GAT---ACAT---TAAC--A
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             4216 12 +      5367 AAT---ACAT---TACC--A
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47513287 12 +  47705337 AAT---ACAT---TAAC--A
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 67264 12 -    104429 AAT---ACAT---TACC--A
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    5797 12 +     14967 AAT---ACAT---TAAC--A
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 1657 12 -      7628 AAT---ACAT---TACC--A
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    115350 12 -    135482 AAT---ACAT---TAAC--A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           5030 12 -     23713 att---acat---taac--a
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            24339 12 -     27972 att---acat---taac--a
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      44191 17 -     45160 aaa---gcaacCTCCCTCCA
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4949960 12 -   8017169 AAT---ACAT---TAGT--T
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    12076 12 -     36578 AAT---ATAT---CAAA--C
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            120880 12 -    122454 AAT---ACAT---TCAC--A
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1987485                           1685 12 -      5908 AAT---ACAT---TAAC--A
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       2309 12 -     17985 AAT---ACAT---TAAC--A
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            1676 12 +      7694 AAT---ACAT---TAAC--A
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26740154 12 +  26888534 AAT---ACAT---TAAC--A
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            97037 12 +    112873 AAT---ACAT---TAAC--A
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             43289 12 -     61926 AAT---ACAT---TAAC--A
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        24720 12 +     78826 AAT---ACAT---TAAC--A
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              8669 12 -     15800 AAT---ACAT---TAAC--A
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        11867 12 -     16101 AAT---ACAT---TAAC--A
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          5176 12 +      9673 AAT---ACAT---TAAC--A
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13474172 12 -  19735023 AAT---ACAT---TAAC--A
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           13078 12 -     31692 AAT---ACAT---TAAC--A
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           4960 12 +     21690 AAT---ACAT---TCAC--A
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       22511 12 +     44506 AAT---ACAT---TAAC--A
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        22723 12 +     67491 AAT---ACAT---TAAC--A
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      12962 12 -     98129 AAT---ACAT---TAAC--A
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     22562 12 +    147771 AGT---ACAT---TAAC--A
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        22817 12 -     23762 AAT---ACAT---TAAC--A
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          3283 12 -     55515 AAT---ACAT---TAAC--A
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         22636 12 +    152463 AAT---ACAT---TAAC--A
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                        353 12 -    119457 AAT---ACAT---TAAC--A
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         12358 12 +    134592 AAT---ACAT---TAAC--A
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          22946 12 -     75465 AAT---ACAT---TAAC--A
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              186837 12 -    373494 AAT---ACAT---TCAC--A
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19807485 12 +  19899266 AAT---ACAT---TCAC--A
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               5411 12 -     15069 AAT---ACAT---TAAC--A
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              5545 12 +     14865 AAT---ACAT---TAAC--A
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_467676                1218 12 -      1272 AGC---ATAG---TAAC--A
i Procavia_capensis.ProCapCap_scaffold_467676           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6848210 12 +  12164890 AAT---ACAT---TAAC--A
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coronatus.k141_1353159                         3276  3 +     11805 ---------------AC--A
i Propithecus_coronatus.k141_1353159                    I 3 C 0
s Propithecus_diadema.k141_577245                           42611 12 +     52369 AAT---ACAT---TAAC--A
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         34999 12 -     44753 AAT---ACAT---TAAC--A
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            16921 12 +     27322 AAT---ACAT---TAAC--A
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       16557 12 -     53241 AAT---ACAT---TAAC--A
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         38829  3 -     48185 ---------------AC--A
i Propithecus_verreauxi.k141_158021                     I 3 C 0
s Psammomys_obesus.NESX01026517.1                           33889 12 +     77221 AAT---GCAT---TAGT--T
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            3440  8 -     27784 ACT---ACAC---T------
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        246218 12 -    344369 AAT---ATAT---TAAT--A
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13245546 12 -  17261082 AAT---ACAT---TAGC--A
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             603501  6 -   3946241 AAT---ACA-----------
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131533890 15 - 161321710 aatttaacat---taac--a
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             29529 12 +     56732 AAT---ACAT---TAAC--A
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6806020 12 +   6970761 AAT---ACAT---TAAC--A
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             5414 12 +     18040 AAT---ACAT---TAAC--A
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                15346 12 +     68503 AAT---ACAT---TCAC--A
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13915181 12 +  90463843 AAT---GCat---tagt--t
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1787382 12 +   2252614 AAC---ACAT---TAAC--A
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_1391695                           1642 12 -      1866 AAT---ACAT---TAAC--A
i Rhinopithecus_bieti.k119_1391695                      C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206377299 12 - 206558726 AAT---ACAT---TAAC--A
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44856199 12 -  45163003 AAT---ACAT---TAAC--A
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                18870 12 +    109198 AAT---ACAT---TAGC--A
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       7508 12 +     12214 AAT---ACAT---TCAC--A
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15672377 12 -  43202129 AAT---ACAT---TAAC--A
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        4294 12 +     34089 AAT---ACAT---TAAC--A
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              4235 12 -     60842 AAT---ACAT---TAAC--A
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              4330 12 +     67014 AAT---ACAT---TAAC--A
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              4308 12 +     60816 AAT---ACAT---TAAC--A
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 4245 12 -     76454 AAT---ACAT---TAAC--A
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17340970 12 -  30362882 AAT---ACAT---TAAC--A
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         20329 12 -     62485 AAT---ACAT---TAAC--A
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   31863 12 -    114521 AAT---ATAT---TAAC--A
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        3026 12 +     15331 AAT---ACAT---TAAC--A
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       8423 12 +     20762 AAT---ACAT---TAAC--A
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         118425 12 +    130994 AAT---ACAT---TAAC--A
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           37212 12 +     46263 AAT---ACAT---TAAC--A
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     30326 12 +     42640 AAT---ACAT---TAAC--A
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        13370 12 +     30600 AAT---ACAT---TAAC--A
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   99916 12 -    120886 AAT---ATAA---TAGT--T
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            18442 12 +    739146 AAT---ATAT---TAAT--A
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2239371 12 +   2842873 AAT---acat---caat--a
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             234339 12 -    276980 AAT---GCAT---TAAC--A
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            27155  9 +     62062 AAT---ACA------AC--A
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189271425 12 + 218635234 AAT---ACAT---TCAC--A
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        14585 11 -  13920577 A-T---ACAT---TAGC--A
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               5606 12 -      6213 AAT---ACAT---TAAC--A
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               14285 12 +     45698 AGT---CCAT---CAAC--A
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      806500 12 +   1148477 AAT---ACAT---TAAC--A
i Tapirus_indicus.TapInd_scaffold_176                   I 52 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  57191 12 +     99546 AAT---ACAT---TAAC--A
i Tapirus_terrestris.TapTer_scaffold_14939              I 52 C 0
s Tarsius_lariang.k141_609102                               26115 12 +     42269 ACT---ACAT---TAAC--A
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               59431 12 +     65473 ACT---ACAT---TAAC--A
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194007427 12 - 194193292 GAT---ACAT---TAAC--A
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             38900 12 -     47444 AAT---ATAT---CAAA--A
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  5118 12 +      6782 ATT---CCAT---TAAC--A
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  135442 12 -    259118 AAT---ATAT---TAAC--A
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        26530 12 +     38948 AAT---ACAT---TAAC--A
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   20259 12 -     32910 AAT---ACAT---TAAC--A
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      1647 12 -     12939 AAT---ACAT---TAAC--A
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       1582 12 -     14244 AAT---ACAT---TAAC--A
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           42980 12 -     54611 AAT---ACAT---TAAC--A
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                         786 12 -     11566 AAT---ACAT---TAAC--A
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     2958 12 -     15592 AAT---ACAT---TAAC--A
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          1615 12 +     14371 AAT---ACAT---TAAC--A
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  51367 12 +     51589 AAT---ACAT---TAAC--A
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       14548 12 +     14732 AAT---ACAT---TAAC--A
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       5019 12 -     28054 AAT---ACAT---TAAC--A
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44659819 12 -  44834318 AAT---ACAT---TAAC--A
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       2123 12 +     13828 AAT---ACAT---TAAC--A
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   4733 12 +     90398 AAT---ATAT---TCAC--A
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16084461 12 +  31416278 AGT---ATAT---TAAT--A
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2792484 12 -   3938065 AAT---ACAT---TAAC--A
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    4689 12 +     13056 AAT---ACAT---TAAC--A
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69312990 12 -  96451834 AAT---ACAT---TCAC--A
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                    907 12 +     10241 AAT---ATAT---TAAT--A
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6514356 12 +  28682327 AAT---ACAT---TAAC--A
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  4913 12 -     20643 AAT---ACAT---TAAC--A
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             24454 12 -     33872 AAT---ACAT---TAAC--A
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1524232 12 -   2331223 AAT---ATAT---TCAC--A
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                137866 12 -    281493 AAT---ACAT---TAAC--A
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       126489 12 -    134049 AGT---ACAT---CAAT--A
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        213834 12 -    227762 AAT---ACAT---TAAC--A
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     14583  6 -     20485 C-T---TTAT----------
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           6482 12 -      8775 AAT---ACAT---TCAC--A
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Sorex_araneus.JH798170.1                               17750754 3364 -  27805282 I
e Microgale_talazaci.MicTal_scaffold_34660                  33938  0 -     48017 C
e Elephantulus_edwardii.JH947210.1                        7804622 10712 +  15467074 I
e Echinops_telfairi.JH980316.1                           22997949  0 -  44670279 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           18577  0 -    119109 C
e Hylobates_pileatus_a.tarseq_592                             33391 319 -     60944 I
e Propithecus_coquerelli.NW_012147997.1                    667273 6500 -   2312742 I
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               11447 5 +    209709 TTTA----G
s Acinonyx_jubatus.LLWD01000356.1                         2033567 5 +   3721120 ttta----a
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    112199 5 -    189883 ATTA----A
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10656879 5 +  23371972 TTTA----G
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7094223 5 -  16596857 TTTA----G
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   16509 5 -     22067 CTTA----A
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                    931 5 -     60446 TTTA----G
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         1654 5 -     29318 TTTA----G
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                          589 5 +     38766 TTTA----G
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          1548 5 -     80423 TTTA----G
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             9843 5 -     18050 TTTA----G
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                 10936 5 -     11521 TTTA----G
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                             10520 5 -     21359 TTTA----G
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                 135 5 +      2129 TTTA----G
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          9819 5 -     10438 TTTA----G
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            6475 5 +      7047 TTTA----G
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             9755 5 +     10410 TTTA----G
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            3563 5 -      4927 TTTA----G
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3519698 5 +   4113121 GGTG----G
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      389900 4 -    631301 GTAA-----
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            30281 5 +     33004 GGTG----G
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 62209 5 +     78111 TTTA----G
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            5150 5 +     22701 TTTA----G
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5749107 5 +   9889416 TTTA----G
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             5694 5 -    104377 TTTA----G
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               5696 5 +     23246 TTTA----G
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     3320 4 +      5067 TTT-----A
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_587554                         646 5 +      9265 tttt----c
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 8311 4 -     29036 GTAA-----
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9538952 5 +  39197703 TTTA----G
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             60223 5 +     85812 TTTA----G
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                11235 5 +     89302 TTTA----G
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             15740 5 -     58268 TTTA----G
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             63731 5 +    119057 TTTA----G
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               5700 5 -     25888 TTTA----G
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 6363 5 -     16375 TTTG----T
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              2683 5 +      2719 TTTG----T
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26379722 5 +  51448160 TTTA----G
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        4953 5 -     13118 TTTA----G
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   42761 5 -     72089 GGTG----G
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6559436 5 +   6870073 GGTG----G
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138139540 5 - 161108492 GGTG----G
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     572077 5 -    998990 GGTG----G
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136295273 5 - 158972876 GGTG----G
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1232356 5 -   1914593 GGTG----G
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               113593 5 -    171031 TTTA----G
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 12624 5 +    125063 TTTA----G
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                14669 5 -    216513 TTTA----G
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        7209 5 -    134917 TTTA----G
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3219140 5 -   8989139 TCTA----G
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           396842 5 -  15254737 TCTA----G
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2972577 5 +   6889770 TCTA----G
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11519038 5 +  39901454 TTTA----G
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   14063 5 +     87036 TTTA----G
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11265705 5 -  35597290 TTTA----G
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11088239 5 +  39895921 TTTA----G
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16455254 5 -  44759192 TTTA----G
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21324774 5 + 157394656 GGTG----G
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135706001 5 - 157403528 GGTG----G
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          308645 5 +    345090 TTTA----G
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               59104 4 +     67245 GTAA-----
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   30325 5 +     33760 CAAA----C
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   158449 5 -    276539 TTTA----G
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15786195 5 -  24422027 NNNN----N
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15798130 5 -  24440124 tatt----a
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       176321 5 +    436027 TATT----A
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18890438 5 -  29618158 TTTA----G
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 7982 5 -     26817 TTTA----G
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                12222 5 +     25043 TTTA----G
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         7679 5 +     21754 TTTA----G
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4363452 5 +   7569818 TTTA----G
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         3209 5 -      9338 TTTA----G
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6554876 5 +   6739814 TTTA----G
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      26353 5 +     60454 TTTA----G
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          1558 5 -     21101 TTTA----G
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         58868 5 -    107033 TTTA----G
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        1760 5 -     17608 TTTA----G
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          29255 5 +     30494 TTTA----G
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          58101 5 -     59240 TTTA----G
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          1802 5 +     16677 TTTA----G
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           23960 5 +     35983 TTTA----G
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11990488 5 +  12117833 TTTA----G
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46477246 5 +  46592721 TTTA----G
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      40797 5 -     45581 TTTA----G
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       1803 5 +     35577 TTTA----G
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        1579 5 -     25661 TTTA----G
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        1557 5 -     17744 TTTA----G
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        21173 5 +     37128 TTTA----G
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           2382 5 -      6963 TTTA----G
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           58649 5 -     68416 TTTG----C
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            7693 5 +     13308 TTTG----C
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             5239 5 -     18223 TTTA----G
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             22262 5 +     25473 TTTA----G
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           41297 5 +     57117 TTTA----G
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          45976 5 +     54541 TTTA----G
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15961357 5 +  43084221 TATA----A
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         70800 5 +    196370 TTTA----G
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          14980 5 +     40510 TTTA----G
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15138719 5 -  15256731 TTTA----G
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      33766 5 -     53260 TTTA----G
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101144330 5 + 101219884 TTTA----G
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                16067 5 -     21363 TTCA----G
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           761374 5 +    964067 TTCA----G
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10886096 5 +  10971483 TTTA----G
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147664260 5 + 156195979 TTTA----G
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            16245 5 +     23629 TTTA----G
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60613196 5 +  78930452 TGTA----G
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         39274 5 -     40477 TTTA----G
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 278152 5 -    399297 ATTA----A
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53028835 5 +  72327488 ACTA----A
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_88140              1572 5 +     11655 TTTA----T
i Crocidura_indochinensis.CroInd_scaffold_88140         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            51584 5 -     70449 TTTA----A
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  207769 5 -    956709 TTTA----A
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 30341 9 -     67205 TACAATAAA
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                17376 5 +     26546 TATT----A
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             58461 5 -    236241 TATG----A
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          183256 5 -   6883506 TTTA----G
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16844508 5 +  31942871 TTTG----C
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80036400 5 -  96802777 TTTA----G
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18698376 4 -  18957592 GTAA-----
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 322104 5 +    993696 TTTA----G
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   2754 5 +    151128 TTTA----G
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   156614 5 +    228994 TATA----G
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3655958 4 +   4240102 CAA-----A
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 27591 4 +     28912 CAA-----A
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                35712 5 -     73477 TATT----A
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 I 1
s Eidolon_helvum.KE772537.1                                 11803 5 +     24177 TTGA----G
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1491050 5 +   1727528 GGTG----G
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        239382 5 -    369425 GTTA----A
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           6495 5 -      7838 GTTA----A
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85871742 5 +  99434291 TTCA----G
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4703749 5 +   6522550 TTAA----G
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5852555 5 -   7175178 TTTA----G
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13351058 5 +  41866177 TTTA----G
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          12548 5 +     92910 TTTA----G
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11532674 5 +  16010500 aata----a
i Erinaceus_europaeus.JH835290.1                        C 0 I 517
s Erythrocebus_patas.Contig8                             48770897 5 -  48907691 TTTA----G
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          314606 5 +    330699 TTTA----G
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             61060 5 +     89355 TTTA----G
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              4701 5 +     13586 TTTG----C
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               4637 5 -      6809 TTTG----C
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            11110 5 +     36558 TTTG----C
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             7430 5 +     60246 TTTG----C
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                10908 5 +    109717 TTTG----C
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               15292 5 +     16540 TTTG----C
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                15566 5 +     27497 TTTG----C
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           18022 5 +     26808 TTTG----C
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                32758 5 +     46535 TTTG----C
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              15480 5 -     29447 TTTG----C
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129892544 5 - 159252932 TTGA----A
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129279613 5 - 158578461 ttta----a
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 20758 5 +     52776 TTTA----A
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Galago_moholi.ctg555                                     210531 5 -    847004 tttt----c
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           12910 5 -     43889 tttt----c
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           9985 5 +     27357 tttt----c
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               155870 5 +    324696 ATTA----G
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    180847 5 -    189561 GGTG----G
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           12690 5 -     18683 TTCG----A
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               4963 5 -     14630 TTTA----G
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119652062 5 - 195582420 TTTA----G
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   77235 5 +    118900 TTCA----A
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         1480 5 +     10286 TTTG----C
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_1254239                            9656 5 +      9690 TTTG----C
i Hapalemur_gilberti.k141_1254239                       C 0 C 0
s Hapalemur_griseus.k141_1387522                             5286 5 +     56096 TTTG----C
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        28536 5 -     42470 TTTG----C
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        45159 5 -     54384 TTTG----C
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              16789 5 +     53719 TTTA----A
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                27046 5 -     91191 GGTG----G
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2550692 5 +  31725842 tgta----a
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               60117 5 +     73687 CTTA----G
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              146694 5 +    277961 TTTA----G
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      277974 5 -    477199 ttta----a
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              7128 5 -      9143 TTTA----G
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      4369 5 -   7690867 TTTA----G
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 16861 5 -     67322 TTTA----A
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           18577 2 -    119109 ---T----A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              4795 5 +      5897 TTTA----G
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_624065                               1659 5 +      2112 TGTA----G
i Hylobates_agilis.k141_624065                          C 0 C 0
s Hylobates_klossii.k141_466549                             11235 5 +     11537 TTTA----G
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14624340 5 -  25970782 TTTA----G
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            1596 5 -      2977 TTTA----G
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     5762 5 +     22540 TGTA----A
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7125465 5 +  13083262 TTTT----A
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_4418183                                   1129 5 -      1457 TTTG----C
i Indri_indri.k141_4418183                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               8600 5 +     17520 TTTA----G
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8565519 5 +  11848649 CTTA----A
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               23216 5 +     37189 TTTA----G
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          49820 5 -    147782 TTTA----G
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   113840 5 -    115756 TTAA----G
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258406841 5 - 285822530 TTTG----C
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        23595 5 +     39228 TTTG----C
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            52982 5 +     63517 TTTG----C
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        78238 5 +    116806 TTTG----C
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     31234 5 -     33031 TTTG----C
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3085550 5 -   3498232 TTTA----T
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    12873 5 +     22452 TGTA----T
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            135553 5 +   3060487 TTTA----G
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19247962 5 +  19376315 TTTA----G
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           10291 5 +     84689 tttt----c
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3778040 5 +   6799190 tttt----c
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20593816 5 -  62548349 TTTA----G
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11087695 5 +  39895028 TTTA----G
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             19705 5 +     74745 TTTA----G
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12706161 5 +  12821369 TTTA----G
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                1806 5 -      3136 TTTA----G
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           46623 5 +     63263 TTTA----G
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                 1326 5 -      2568 TTTA----G
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 1912 5 -      7381 TTTA----G
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  45130 5 -     79256 TTTA----G
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196035238 5 + 196197964 TTTA----G
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11445406 5 +  11645122 TTTA----G
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   4077 5 -     46448 TTTA----G
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                1749 5 -     13212 TTTA----G
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 15430 5 -     55006 TTTA----G
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43840547 5 +  43892939 TTTA----G
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               16716 5 -     24607 TTTA----G
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               4082 5 -     27140 TTTA----G
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                701176 5 +    802869 TTGA----G
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43437124 5 -  43563597 TTTA----G
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4449950 5 -   4543643 TTTA----G
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            145229 5 +    252755 TTTA----G
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             35306 5 +     58827 TTTA----G
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36873307 5 +  64221397 TTTT----A
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       63992 5 -    234502 TTGA----G
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433              555 5 -     87323 TTCA----G
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               12349 5 +     15977 ATTA----A
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1046544 5 -  26018355 ATTA----A
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Microcebus_murinus.CM007691.1                          16509864 5 +  47401472 TTTG----T
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               22283 4 -     32043 GTAA-----
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22819681 5 -  98408828 GTTA----A
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8209276 5 +  10048721 TAAA----G
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            33929 5 +     45743 TAAA----G
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         1677 5 +     29742 TTTA----G
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        11063 5 -    104932 TTTA----T
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     5250 5 +      8497 TTTG----C
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 145988 5 +    154973 TTTA----G
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                160799 5 +    265003 TTAA----G
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                   592 5 -     19904 AGAG----G
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  144485 5 -    168139 TTTA----A
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          19132 5 -    100666 TTAA----G
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70766189 2 +  92629107 -tt------
i Mus_caroli.LT608236.1                                 C 0 I 6
s Mus_musculus.chr16                                     75489248 2 +  98207768 -tt------
i Mus_musculus.chr16                                    C 0 I 6
s Mus_pahari.LT608305.1                                  67555475 3 +  89017189 att------
i Mus_pahari.LT608305.1                                 C 0 I 6
s Mus_spretus.CM004110.1                                 74330426 2 +  97876770 -tt------
i Mus_spretus.CM004110.1                                C 0 I 6
s Muscardinus_avellanarius.MusAve_scaffold_9643             11476 5 +     98495 TTCA----C
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 I 2
s Mustela_putorius.JH417978.1                             4423922 5 -  28371801 TTCA----C
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     89621 5 -    117718 TATA----A
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               967430 5 +   8389877 TTAA----G
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5019105 5 +   6462685 TTAA----G
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3465011 5 -   3747815 TTAA----G
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        10225 5 +     66751 TTAA----G
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             4640 5 -      8794 TGCA----G
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 I 2
s Nannospalax_galili.KL201303.1                            118036 5 +    362372 atta----a
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               8178 5 +     48152 TTTA----G
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4484455 5 -  14209539 TTTA----T
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3950603 5 -   4490290 TTTA----G
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  48895 5 +     94413 TTAA----G
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_220265                             104 5 +      1763 TTTA----G
i Nomascus_annamensis.k141_220265                       C 0 C 0
s Nomascus_concolor.k141_226614                               897 5 -      5092 TTTA----G
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_642452                            1680 5 +      2851 TTTA----G
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             24615 5 -  18771707 TTTA----G
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  2318 5 +      4512 TTTA----G
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                30500 5 +   3668941 TTTA----G
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65566726 5 -  95554990 tttt----c
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            3455 5 +      6470 tttT----C
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65669065 5 +  89412551 tttt----c
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4995639 5 -  23139505 TGTA----T
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3685171 9 +  10294119 tataataaa
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             679120 5 -   3126709 TTTA----T
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1079281 5 +   1425656 GGTG----G
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         36575 5 +     78940 GGTG----G
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  124934 5 +    145789 GTTA----A
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  36735 5 +     62360 ATTA----A
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7224285 5 -   7562323 TTTA----G
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              57116 5 -     66828 ctta----g
i Orycteropus_afer.OryAfe_flattened_line_13509          I 155 I 6
s Oryctolagus_cuniculus.CM000803.1                      141875911 5 + 163896628 TGTA----T
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      307785 5 -    505867 TTTA----G
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                         351 5 -     53940 TTTT----C
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18008324 5 -  38779656 TTTT----C
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134076840 5 - 275406953 GGTG----G
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      78054 5 +    140051 GGTG----G
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127574323 5 - 205426864 TTTA----G
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120151476 5 - 196562556 TTTA----G
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  33911 5 +    295523 TTTA----A
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3637647 5 +  18214204 ttta----a
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5027320 5 -   6340057 ttta----a
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1065700 5 -   1292953 TGTG----G
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188155912 5 - 188283584 TTTA----G
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             4228 5 +      5367 TTTA----G
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47513299 5 +  47705337 TTTA----G
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 67276 5 -    104429 TTTA----G
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    5809 5 +     14967 TTTA----G
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 1669 5 -      7628 TTTA----G
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    115362 5 -    135482 TTTA----A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           5042 5 -     23713 tttt----c
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            24351 5 -     27972 tttt----c
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      44208 4 -     45160 CAA-----A
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4949972 5 -   8017169 ATAA----A
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    12088 5 -     36578 TGTA----A
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            120892 5 -    122454 TTTA----G
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1987485                           1697 5 -      5908 TTTA----G
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       2321 5 -     17985 TTTA----G
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            1688 5 +      7694 TTTA----G
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26740166 5 +  26888534 TTTA----G
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            97049 5 +    112873 TTAA----G
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             43301 5 -     61926 TTTA----G
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        24732 5 +     78826 TTTA----G
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              8681 5 -     15800 TTTA----G
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        11879 5 -     16101 TTTA----G
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          5188 5 +      9673 TTTA----G
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13474184 5 -  19735023 TTTA----G
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           13090 5 -     31692 TTTG----G
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           4972 5 +     21690 TTTA----G
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       22523 5 +     44506 TTTA----G
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        22735 5 +     67491 TTTA----G
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      12974 5 -     98129 TTTA----G
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     22574 5 +    147771 TTTA----G
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        22829 5 -     23762 TTTA----G
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          3295 5 -     55515 TTTA----G
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         22648 5 +    152463 TTTA----G
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                        365 5 -    119457 TTTA----G
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         12370 5 +    134592 TTTA----G
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          22958 5 -     75465 TTTA----G
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              186849 5 -    373494 TTTA----G
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19807497 5 +  19899266 TTTA----G
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               5423 5 -     15069 TTTA----G
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              5557 5 +     14865 TTTA----G
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_467676                1230 5 -      1272 CTTA----G
i Procavia_capensis.ProCapCap_scaffold_467676           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6848222 5 +  12164890 TTTG----C
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coronatus.k141_1353159                         3279 5 +     11805 TTTG----C
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           42623 5 +     52369 TTTG----C
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         35011 5 -     44753 TTTG----C
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            16933 5 +     27322 TTTG----C
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       16569 5 -     53241 TTTG----C
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         38832 5 -     48185 TTTG----C
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           33901 5 +     77221 ATTA----A
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            3448 3 -     27784 --AA----G
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        246230 5 -    344369 TTCA----G
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13245558 5 -  17261082 TTGA----G
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             603507 3 -   3946241 --GA----G
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131533905 5 - 161321710 ttta----a
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             29541 5 +     56732 TTTA----G
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6806032 5 +   6970761 TTTA----G
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             5426 5 +     18040 TTTA----G
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                15358 5 +     68503 GGTG----G
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13915193 3 +  90463843 att------
i Rattus_norvegicus.chr11                               C 0 I 6
s Rhinolophus_sinicus.LVEH01000179.1                      1787394 5 +   2252614 TTTA----G
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_1391695                           1654 5 -      1866 TTTA----G
i Rhinopithecus_bieti.k119_1391695                      C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206377311 5 - 206558726 TTTA----G
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44856211 5 -  45163003 TTTA----G
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                18882 5 +    109198 TCGA----G
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       7520 5 +     12214 GGTG----G
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15672389 5 -  43202129 TTTA----G
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        4306 5 +     34089 TTTA----G
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              4247 5 -     60842 TTTA----G
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              4342 5 +     67014 TTTA----G
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              4320 5 +     60816 TTTA----G
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 4257 5 -     76454 TTTA----G
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17340982 5 -  30362882 TTTA----G
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         20341 5 -     62485 TTTA----G
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   31875 5 -    114521 TTTA----G
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        3038 5 +     15331 TTTA----G
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       8435 5 +     20762 TTTA----G
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         118437 5 +    130994 TTTA----G
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           37224 5 +     46263 TTTA----G
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     30338 5 +     42640 TTTA----G
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        13382 5 +     30600 TTTA----G
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   99928 5 -    120886 ATTA----A
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            18454 5 +    739146 CATA----G
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2239383 5 +   2842873 tttt----a
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             234351 5 -    276980 TTTA----G
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            27164 5 +     62062 TTTA----A
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189271437 5 + 218635234 TTTA----G
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        14596 5 -  13920577 TTTA----G
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               5618 5 -      6213 TTAA----G
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               14297 5 +     45698 TGCA----G
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      806512 5 +   1148477 TTTA----G
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  57203 5 +     99546 TTTA----G
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               26127 5 +     42269 TTTA----G
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               59443 5 +     65473 TTTA----G
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194007439 5 - 194193292 TTTA----G
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             38912 5 -     47444 TGTA----A
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  5130 5 +      6782 TTTA----G
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  135454 4 -    259118 GTAA-----
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        26542 5 +     38948 TTTA----G
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   20271 5 -     32910 TTTA----G
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      1659 5 -     12939 TTTA----G
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       1594 5 -     14244 TTTA----G
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           42992 5 -     54611 TTTA----G
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                         798 5 -     11566 TTTA----G
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     2970 5 -     15592 TTTA----G
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          1627 5 +     14371 TTTA----G
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  51379 5 +     51589 TTTA----G
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       14560 5 +     14732 TTTA----G
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       5031 5 -     28054 TTTA----G
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44659831 5 -  44834318 TTTA----G
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       2135 5 +     13828 TTTA----G
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   4745 5 +     90398 GTTA----G
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16084473 5 +  31416278 TTTA----G
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2792496 5 -   3938065 TTGG----G
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    4701 5 +     13056 TTGG----G
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69313002 5 -  96451834 GTTA----G
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                    919 5 +     10241 TTTA----A
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6514368 5 +  28682327 TTTA----G
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  4925 5 -     20643 TTTG----C
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             24466 5 -     33872 TTTG----C
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1524244 5 -   2331223 TCTA----G
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                137878 5 -    281493 TTTA----G
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       126501 5 -    134049 TTTT----A
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        213846 5 -    227762 TTTA----T
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     14589 4 -     20485 -CTA----A
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 I 3
s Ziphius_cavirostris.ZipCav_flattened_line_127025           6494 5 -      8775 TTTA----G
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Sorex_araneus.JH798170.1                               17750754 3364 -  27805282 I
e Microgale_talazaci.MicTal_scaffold_34660                  33938 0 -     48017 C
e Elephantulus_edwardii.JH947210.1                        7804622 10712 +  15467074 I
e Echinops_telfairi.JH980316.1                           22997949 0 -  44670279 C
e Hylobates_pileatus_a.tarseq_592                             33391 319 -     60944 I
e Propithecus_coquerelli.NW_012147997.1                    667273 6500 -   2312742 I
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               11452 14 +    209709 AT---------GTT------AG-T---AAAGGA
s Acinonyx_jubatus.LLWD01000356.1                         2033572 10 +   3721120 at---------gtc------AT-T---A--A--
i Acinonyx_jubatus.LLWD01000356.1                       C 0 I 2
s Acomys_cahirinus.AcoCah_scaffold_1625                    112204 15 -    189883 GTGA-TGTT--AAT------AA-G---A-----
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10656884 10 +  23371972 AT---------GTC------AT-T---A--A--
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 I 2
s Ailurus_fulgens.LNAC01000003.1                          7094228 10 -  16596857 AT---------GTC------AT-T---A--A--
i Ailurus_fulgens.LNAC01000003.1                        C 0 I 2
s Allactaga_bullata.AllBul_scaffold_70162                   16514  9 -     22067 AC---------ACT------AG-T---A-----
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                    936 14 -     60446 AT---------GTC------AG-T---AAACTA
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         1659 14 -     29318 AT---------GTT------AG-T---AAACTA
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                          594 14 +     38766 AT---------GTT------AG-T---AAACTA
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          1553 14 -     80423 AT---------GTT------AG-T---AAACTA
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             9848 14 -     18050 GT---------GTT------AG-T---AAACTA
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                 10941 14 -     11521 GT---------GTT------AG-T---AAACTA
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                             10525 14 -     21359 GT---------GTT------AG-T---AAACTA
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                 140 14 +      2129 GT---------GTT------AG-T---AAACTA
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          9824 14 -     10438 GT---------GTT------AG-T---AAACTA
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            6480 14 +      7047 GT---------GTT------AG-T---AAACTA
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             9760 14 +     10410 GT---------GTT------AG-T---AAACTA
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            3568 14 -      4927 GT---------GTT------AG-T---AAACTA
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3519703 10 +   4113121 AT---------GCA------AC-T---A--A--
i Ammotragus_lervia.NIVO01013474.1                      C 0 I 2
s Anoura_caudifer.AnoCau_scaffold_422                      389904  5 -    631301 --------------------AC-T---A--A--
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 I 2
s Antilocapra_americana.AntAmePen_scaffold_42841            30286 10 +     33004 AT---------GCA------AC-T---A--A--
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 I 2
s Aotus_azarae.k141_3170768                                 62214 14 +     78111 GT---------GTT------AG-T---AAACCA
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            5155 14 +     22701 GT---------GTT------AG-T---AAACTA
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5749112 14 +   9889416 GT---------GTT------AG-T---AAACTA
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             5699 14 -    104377 GT---------GTT------AG-T---AAACTA
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               5701 14 +     23246 GT---------GTT------AG-T---AAACTA
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     3324  9 +      5067 AT---------GCT------AC-T---A-----
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_587554                         651 10 +      9265 aT---------GGT------AT-T---A--A--
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 8315  5 -     29036 --------------------AC-T---A--A--
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 I 2
s Ateles_geoffroyi_b.tarseq_2582                             9538957 14 +  39197703 GT---------GTT------AG-T---AAACTA
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             60228 14 +     85812 GT---------GTT------AG-T---AAACTA
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                11240 14 +     89302 GT---------GTT------AG-T---AAACTA
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             15745 14 -     58268 GT---------GTT------AG-T---AAACTA
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             63736 14 +    119057 GT---------GTT------AG-T---AAACTA
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               5705 14 -     25888 GT---------GTT------AG-T---AAACTA
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 6368 12 -     16375 AT---------GCT------AT-T---G--GTA
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              2688 12 +      2719 AT---------GCT------AT-T---G--GTA
i Avahi_peyrierasi.k141_2689020                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26379727 10 +  51448160 AT---------GCA------AC-T---A--A--
i Balaenoptera_acutorostrata.KI537095.1                 C 0 I 2
s Balaenoptera_bonaerensis.DF502048.1                        4958 10 -     13118 AT---------GCA------AC-T---A--A--
i Balaenoptera_bonaerensis.DF502048.1                   C 0 I 2
s Beatragus_hunteri.BeaHun_scaffold_21644                   42766 10 -     72089 AT---------GCC------AC-T---A--A--
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 I 2
s Bison_bison.KN264915.1                                  6559441 10 +   6870073 AT---------ACA------AC-T---A--A--
i Bison_bison.KN264915.1                                C 0 I 2
s Bos_indicus.CM003021.1                                138139545 10 - 161108492 AT---------ACA------AC-T---A--A--
i Bos_indicus.CM003021.1                                C 0 I 2
s Bos_mutus.JH883513.1                                     572082 10 -    998990 AT---------ACA------AC-T---A--A--
i Bos_mutus.JH883513.1                                  C 0 I 2
s Bos_taurus.CM000177.6                                 136295278 10 - 158972876 AT---------ACA------AC-T---A--A--
i Bos_taurus.CM000177.6                                 C 0 I 2
s Bubalus_bubalis.KI419065.1                              1232361 10 -   1914593 AT---------ACA------AC-T---A--A--
i Bubalus_bubalis.KI419065.1                            C 0 I 2
s Cacajao_ayresi.k141_724503                               113598 14 -    171031 GT---------GTT------AG-T---AAACTA
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 12629 14 +    125063 GT---------GTT------AG-T---AAACTA
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                14674 14 -    216513 GT---------GTT------AG-T---AAACTA
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        7214 14 -    134917 GT---------GTT------AG-T---AAACTA
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3219145 10 -   8989139 AT---------GCA------GC-T---A--A--
i Camelus_bactrianus.KN276303.1                         C 0 I 2
s Camelus_dromedarius.KN271192.1                           396847 10 -  15254737 AT---------GCA------GC-T---A--A--
i Camelus_dromedarius.KN271192.1                        C 0 I 2
s Camelus_ferus.KB016973.1                                2972582 10 +   6889770 AT---------GCA------GC-T---A--A--
i Camelus_ferus.KB016973.1                              C 0 I 2
s CanFam4.chr31                                          11519043 10 +  39901454 AT---------GTC------AT-T---A--A--
i CanFam4.chr31                                         C 0 I 2
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   14068 10 +     87036 AT---------GTC------AT-T---A--A--
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 I 2
s Canis_lupus_dingo.QKWQ01001993.1                       11265710 10 -  35597290 AT---------GTC------AT-T---A--A--
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 I 2
s Canis_lupus_familiaris.chr31                           11088244 10 +  39895921 AT---------GTC------AT-T---A--A--
i Canis_lupus_familiaris.chr31                          C 0 I 2
s Canis_lupus_orion.HG994411.1                           16455259 10 -  44759192 AT---------GTC------AT-T---A--A--
i Canis_lupus_orion.HG994411.1                          C 0 I 2
s Capra_aegagrus.CM003214.1                              21324779 10 + 157394656 AT---------GCA------AC-T---A--A--
i Capra_aegagrus.CM003214.1                             C 0 I 2
s Capra_hircus.CM004562.1                               135706006 10 - 157403528 AT---------GCA------AC-T---A--A--
i Capra_hircus.CM004562.1                               C 0 I 2
s Carlito_syrichta.NW_007248099.1                          308650 12 +    345090 AA---------GTC------ac-t---a--ata
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               59108  5 +     67245 --------------------AC-T---A--A--
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 I 1
s Castor_canadensis.CasCan_scaffold_47037                   30330  8 +     33760 AT---------G-T------AT-T---A-----
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   158454 10 -    276539 AT---------GCA------AC-T---A--A--
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 I 2
s Cavia_aperea.AVPZ01000278.1                            15786200  8 -  24422027 NN----------NN------NN-N---N-----
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15798135  8 -  24440124 aa----------ct------at-t---a-----
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       176326  8 +    436027 AA----------CT------AT-T---A-----
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18890443 14 -  29618158 GT---------GTT------AG-T---AAACTA
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 7987 14 -     26817 GT---------GTT------AG-T---AAACTA
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                12227 14 +     25043 GT---------GTT------AG-T---AAACTA
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         7684 12 +     21754 AT---------GTC------AA-T---A--ATA
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4363457 10 +   7569818 AT---------GCT------AC-T---A--A--
i Ceratotherium_simum.JH767818.1                        C 0 I 2
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         3214 10 -      9338 AT---------GCT------AC-T---A--A--
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 I 2
s Cercocebus_atys.KQ010443.1                              6554881 14 +   6739814 AT---------GTT------AG-T---AAACTA
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      26358 14 +     60454 AT---------GTT------AG-T---AAACTA
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          1563 14 -     21101 AT---------GTT------AG-T---AAACTA
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         58873 14 -    107033 AT---------GTT------AG-T---AAACTA
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        1765 14 -     17608 AT---------GTT------AG-T---AAACTA
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          29260 14 +     30494 AT---------GTT------AG-T---AAACTA
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          58106 14 -     59240 AT---------GTT------AG-T---AAACTA
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          1807 14 +     16677 AT---------GTT------AG-T---AAACTA
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           23965 14 +     35983 AT---------GTT------AG-T---AAACTA
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11990493 14 +  12117833 AT---------GTT------AG-T---AAACTA
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46477251 14 +  46592721 AT---------GTT------AG-T---AAACTA
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      40802 14 -     45581 AT---------GTT------AG-T---AAACTA
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       1808 14 +     35577 AT---------GTT------AG-T---AAACTA
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        1584 14 -     25661 AT---------GTT------AG-T---AAACTA
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        1562 14 -     17744 AT---------GTT------AG-T---AAACTA
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        21178 14 +     37128 AT---------GTT------AG-T---AAACTA
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           2387 10 -      6963 AT---------GCT------AC-T---A--A--
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 I 2
s Cheirogaleus_major.k141_1157592                           58654 12 -     68416 AT---------GCT------AC-T---A--ATA
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            7698 12 +     13308 AT---------GCT------AC-T---A--ATA
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             5244 14 -     18223 GT---------GTC------AG-T---AAACTA
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             22267 14 +     25473 GT---------GTT------AG-T---AAACTA
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           41302 14 +     57117 GT---------GTT------AG-T---AAACTA
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          45981 14 +     54541 GT---------GTT------AG-T---AAACTA
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15961362  8 +  43084221 AG----------ct------ac-t---a-----
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         70805 14 +    196370 GT---------GTT------AG-T---AAACTA
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          14985 14 +     40510 GT---------GTT------AG-T---AAACTA
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15138724 14 -  15256731 AT---------GTT------AG-T---AAACTA
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      33771 14 -     53260 AT---------GTT------AG-T---AAACTA
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101144335 14 + 101219884 AT---------GTT------AG-T---AAACTA
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                16072 10 -     21363 AT---------GAT------AC-T---A--A--
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 I 2
s Choloepus_hoffmanni.KN194586.1                           761379 10 +    964067 AT---------GAT------AC-T---A--A--
i Choloepus_hoffmanni.KN194586.1                        C 0 I 2
s Colobus_angolensis.KN985967.1                          10886101 14 +  10971483 AC---------GTT------AG-T---AAACTA
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147664265 14 + 156195979 AC---------GTT------AG-T---AAACTA
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            16250 14 +     23629 AT---------GTT------AG-T---AAACTA
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60613201 10 +  78930452 AT---------GCT------AC-T---A--A--
i Condylura_cristata.JH655880.1                         C 0 I 2
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         39279 16 -     40477 AT---------GCTACAAGTAC-T---A--A--
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 I 2
s Cricetomys_gambianus.CriGam_scaffold_949                 278157 15 -    399297 GTGC-TATT--ACT------AA-T---A-----
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53028840 15 +  72327488 GTGA-TATT--ACT------AA-T---A-----
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_88140              1577 10 +     11655 AT---------GTG------AC-T---G--A--
i Crocidura_indochinensis.CroInd_scaffold_88140         C 0 I 3
s Cryptoprocta_ferox.CryFer_flattened_line_19014            51589 10 -     70449 AT---------GTC------AT-T---A--A--
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 I 2
s Ctenodactylus_gundi.CteGun_scaffold_447                  207774  9 -    956709 AT---------CCT------AC-T---A-----
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 30350  8 -     67205 AA----------CT------AC-T---A-----
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                17381  9 +     26546 AAG---------GT------AC-T---A-----
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             58466  9 -    236241 AAG---------CT------AC-T---A-----
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          183261 10 -   6883506 AT---------TAT------AC-T---A--A--
i Dasypus_novemcinctus.JH568778.1                       C 0 I 2
s Daubentonia_madagascariensis.ctg11                     16844513 12 +  31942871 AT---------GCT------AC-T---A--ATA
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80036405 10 -  96802777 AT---------GCA------AC-T---A--A--
i Delphinapterus_leucas.KZ290064.1                      C 0 I 2
s Desmodus_rotundus.KZ672188.1                           18698380  5 -  18957592 --------------------AC-T---A--A--
i Desmodus_rotundus.KZ672188.1                          C 0 I 2
s Dicerorhinus_sumatrensis.PEKH010003161.1                 322109 10 +    993696 AT---------GCT------AC-T---A--A--
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 I 2
s Diceros_bicornis.DicBicMic_scaffold_9545                   2759 10 +    151128 AT---------GCT------AC-T---A--A--
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 I 2
s Dinomys_branickii.DinBra_scaffold_1996                   156619  8 +    228994 AA----------GC------AC-T---A-----
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3655962  9 +   4240102 ac---------tgt------at-t---t-----
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 27595  9 +     28912 AC---------TGT------AT-T---T-----
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                35718  8 -     73477 AA----------CT------AC-T---A-----
i Dolichotis_patagonum.DolPat_scaffold_14102            I 1 C 0
s Eidolon_helvum.KE772537.1                                 11808 10 +     24177 AT---------GCT------GC-T---A--A--
i Eidolon_helvum.KE772537.1                             C 0 I 2
s Elaphurus_davidianus.JRFZ01086400.1                     1491055 10 +   1727528 AT---------GCA------AC-T---A--A--
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 I 2
s Ellobius_lutescens.LOEQ01003611.1                        239387 15 -    369425 GTGC-TATT--ACt------aa-t---a-----
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           6500 15 -      7838 GT-ACTATT--ACT------AA-T---a-----
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85871747 10 +  99434291 AT---------GTC------AT-T---A--A--
i Enhydra_lutris.KZ291749.1                             C 0 I 2
s Eptesicus_fuscus.JH977687.1                             4703754 10 +   6522550 AT---------GCT------AC-T---A--A--
i Eptesicus_fuscus.JH977687.1                           C 0 I 2
s Equus_asinus.JREZ01000062.1                             5852560 10 -   7175178 AT---------GCT------AC-T---A--A--
i Equus_asinus.JREZ01000062.1                           C 0 I 2
s Equus_caballus.CM000402.2                              13351063 10 +  41866177 AT---------GCT------AC-T---A--A--
i Equus_caballus.CM000402.2                             C 0 I 2
s Equus_przewalskii.ATBW01073585.1                          12553 10 +     92910 AT---------GCT------AC-T---A--A--
i Equus_przewalskii.ATBW01073585.1                      C 0 I 2
s Erinaceus_europaeus.JH835290.1                         11533196 10 +  16010500 at---------atc------ac-t---a--a--
i Erinaceus_europaeus.JH835290.1                        I 517 I 936
s Erythrocebus_patas.Contig8                             48770902 14 -  48907691 AT---------GTT------AG-T---AAACTA
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          314611 10 +    330699 AT---------GCA------AC-T---A--A--
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 I 2
s Eubalaena_japonica.EubJap_flattened_line_7756             61065 10 +     89355 AT---------GCA------AC-T---A--A--
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 I 2
s Eulemur_albifrons.k141_715837                              4706 12 +     13586 AT---------GCT------AC-T---A--CTA
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               4642 12 -      6809 AT---------GCT------AC-T---A--CTA
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            11115 12 +     36558 AT---------GCT------AC-T---A--CTA
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             7435 12 +     60246 AT---------GCT------AC-T---A--CTA
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                10913 12 +    109717 AT---------GCT------AC-T---A--CTA
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               15297 12 +     16540 AT---------GCT------AC-T---A--CTA
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                15571 12 +     27497 AT---------GCT------AC-T---A--CTA
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           18027 12 +     26808 AT---------GCT------AC-T---A--CTA
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                32763 12 +     46535 AT---------GCT------AC-T---A--CTA
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              15485 12 -     29447 AT---------GCT------AC-T---A--CTA
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129892549 10 - 159252932 AT---------GTC------AT-T---A--A--
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129279618 10 - 158578461 at---------gtc------AT-T---A--A--
i Felis_catus_fca126.CM031420.1                         C 0 I 2
s Felis_nigripes.FelNig_flattened_line_8080                 20763 10 +     52776 AT---------GTC------AT-T---A--A--
i Felis_nigripes.FelNig_flattened_line_8080             C 0 I 2
s Galago_moholi.ctg555                                     210536 12 -    847004 at---------ggT------AC-T---A--CTA
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           12915 12 -     43889 at---------ggt------ac-T---A--CTA
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                           9990 12 +     27357 at---------gGC------AC-T---A--CTA
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               155875 12 +    324696 AT---------GCT------TC-T---A--ATC
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    180852 10 -    189561 AT---------GCA------GC-T---A--A--
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 I 2
s Glis_glis.GliGli_scaffold_79770                           12695  9 -     18683 AT---------GCT------TC-T---A-----
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               4968 14 -     14630 AT---------GTT------AG-T---AAACTA
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119652067 14 - 195582420 AT---------GTT------AG-T---AAACTA
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   77240  9 +    118900 AT---------GGT------AC-T---A-----
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         1485 12 +     10286 AT---------GCT------AC-T---A--ATA
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_1254239                            9661 12 +      9690 AT---------GCT------AC-T---A--ATA
i Hapalemur_gilberti.k141_1254239                       C 0 C 0
s Hapalemur_griseus.k141_1387522                             5291 12 +     56096 AT---------GCT------AC-T---A--ATA
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        28541 12 -     42470 AT---------GCT------AC-T---A--ATA
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        45164 12 -     54384 AT---------GCT------AC-T---A--CTA
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              16794 10 +     53719 AT---------GTC------AT-T---A--A--
i Helogale_parvula.HelPar_flattened_line_22962          C 0 I 2
s Hemitragus_hylocrius.HemHyl_scaffold_16669                27051 10 -     91191 AT---------GCA------AC-T---A--A--
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 I 2
s Heterocephalus_glaber.JH602058.1                        2550697  9 +  31725842 aa------g---ct------gc-t---a-----
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               60122 10 +     73687 AT---------GAT------GA-T---A--A--
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 I 2
s Hippopotamus_amphibius.HipAmp_scaffold_1308              146699 10 +    277961 AT---------GTA------AC-T---A--A--
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 I 2
s Hipposideros_armiger.JXIK01001085.1                      277979  7 -    477199 at---------gct------ac-----------
i Hipposideros_armiger.JXIK01001085.1                   C 0 I 2
s Hipposideros_galeritus.HipGal_scaffold_104691              7133  1 -      9143 A--------------------------------
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 I 1
s Hoolock_leuconedys.ctg79                                      4374 14 -   7690867 AT---------GTT------AG-T---AAACTA
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 16866 10 -     67322 AA---------GTC------AT-T---A--A--
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 I 2
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           18579  8 -    119109 AA----------CT------AC-T---A-----
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              4800 14 +      5897 AA---------GTT------AG-T---AAACTA
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_624065                               1664 14 +      2112 AT---------GTT------AG-T---AAACTA
i Hylobates_agilis.k141_624065                          C 0 C 0
s Hylobates_klossii.k141_466549                             11240 14 +     11537 AT---------GTT------AG-T---AAACTA
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14624345 14 -  25970782 AT---------GTT------AG-T---AAACTA
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            1601 14 -      2977 AA---------GTT------AG-T---AAACTA
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     5767  9 +     22540 AA---------GCC------AC-T---A-----
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7125470 12 +  13083262 AT---------ACt------ac-ttaga-----
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_4418183                                   1134 12 -      1457 AT---------GCT------AC-T---A--ATA
i Indri_indri.k141_4418183                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               8605 10 +     17520 AT---------GCA------AC-T---A--A--
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 I 2
s Jaculus_jaculus.JH725517.1                              8565524  9 +  11848649 AT---------GCT------AC-T---A-----
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               23221 10 +     37189 AT---------GCA------AC-T---A--A--
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 I 2
s Lagothrix_lagothricha.k141_12968                          49825 14 -    147782 GT---------GTT------AG-T---AAACTA
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   113845 10 -    115756 AT---------GCT------AC-T---A--A--
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 I 2
s Lemur_catta.scaffold_1                                258406846 12 - 285822530 AT---------GCT------AC-T---A--ATA
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        23600 12 +     39228 AT---------GCT------AC-T---A--ATA
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            52987 11 +     63517 AT---------GCT------AC-T---A--AT-
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        78243 12 +    116806 AT---------GCT------AC-T---A--ATA
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     31239 12 -     33031 AT---------GCT------AC-T---A--ATA
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3085555 10 -   3498232 AT---------GTC------AG-T---A--A--
i Leptonychotes_weddellii.KB714749.1                    C 0 I 2
s Lepus_americanus.LepAme_scaffold_62849                    12878  9 +     22452 AT---------GTG------AC-T---A-----
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            135558 10 +   3060487 AT---------GCA------AC-T---A--A--
i Lipotes_vexillifer.KE558548.1                         C 0 I 2
s Lophocebus_aterrimus.ctg55                             19247967 14 +  19376315 AT---------GTT------AG-T---AAACTA
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           10296 12 +     84689 at---------ggT------AC-T---A--CTA
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3778045 12 +   6799190 at---------ggt------aC-T---A--CTA
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20593821 10 -  62548349 AT---------GAT------GA-T---A--A--
i Loxodonta_africana.GL010040.1                         C 0 I 2
s Lycaon_pictus.CM007556.1                               11087700 10 +  39895028 AT---------GTC------AT-T---A--A--
i Lycaon_pictus.CM007556.1                              C 0 I 2
s Macaca_arctoides.k141_2201161                             19710 14 +     74745 AT---------GTT------AG-T---AAACTA
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12706166 14 +  12821369 AT---------GTT------AG-T---AAACTA
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                1811 14 -      3136 AT---------GTT------AG-T---AAACTA
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           46628 14 +     63263 AT---------GTT------AG-T---AAACTA
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                 1331 14 -      2568 AT---------GTT------AG-T---AAACTA
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 1917 14 -      7381 AT---------GTT------AG-T---AAACTA
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  45135 14 -     79256 AT---------GTT------AG-T---AAACTA
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196035243 14 + 196197964 AT---------GTT------AG-T---AAACTA
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11445411 14 +  11645122 AT---------GTT------AG-T---AAACTA
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   4082 14 -     46448 AT---------GTT------AG-T---AAACTA
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                1754 14 -     13212 AT---------GTT------AG-T---AAACTA
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 15435 14 -     55006 AT---------GTT------AG-T---AAACTA
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43840552 14 +  43892939 AT---------GTT------AG-T---AAACTA
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               16721 14 -     24607 AT---------GTT------AG-T---AAACTA
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               4087 14 -     27140 AT---------GTT------AG-T---AAACTA
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                701181 10 +    802869 AT---------GCT------GC-T---A--A--
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 I 2
s Mandrillus_leucophaeus.scaffold125                     43437129 14 -  43563597 AT---------GTT------AG-T---AAACTA
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4449955 14 -   4543643 AT---------GTT------AG-T---AAACTA
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            145234  2 +    252755 AT-------------------------------
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             35311  2 +     58827 AT-------------------------------
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36873312 12 +  64221397 AT---------ACT------AC-ttaga-----
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       63997 10 -    234502 AT---------GCA------GC-T---A--A--
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 I 2
s Mellivora_capensis.MelCap_flattened_line_15433              560 10 -     87323 AT---------GTC------AT-T---A--A--
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 I 2
s Meriones_unguiculatus.MerUng_scaffold_52233               12354  9 +     15977 GT-ACTGGT--A---------------------
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 I 3
s Mesocricetus_auratus.KB708139.1                         1046549 15 -  26018355 GTGc-tatt--act------aa-t---a-----
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Microcebus_murinus.CM007691.1                          16509869 12 +  47401472 AT---------GAT------AC-t---a--ata
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               22287  5 -     32043 --------------------AC-T---A--A--
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 I 2
s Microtus_ochrogaster.CM001673.1                        22819686 15 -  98408828 GTGC-TATT--ACT------AA-T---a-----
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8209281 10 +  10048721 AT---------GCT------AC-T---A--A--
i Miniopterus_natalensis.LDJU01000022.1                 C 0 I 2
s Miniopterus_schreibersii.MinSch_scaffold_24116            33934 10 +     45743 AT---------GCT------AC-T---A--A--
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 I 2
s Miopithecus_ogouensis.k141_2935907                         1682 14 +     29742 AT---------GTT------AG-T---AAACTA
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        11068 10 -    104932 AT---------GTC------AG-T---A--A--
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 I 2
s Mirza_zaza.k141_226143                                     5255 12 +      8497 AT---------GAT------AC-T---A--ATA
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 145993 10 +    154973 AT---------GCA------AC-T---A--A--
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 I 2
s Mormoops_blainvillei.MorMeg_scaffold_2952                160804 10 +    265003 AT---------GCT------GC-T---A--A--
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 I 2
s Moschus_moschiferus.MosMos_scaffold_78805                   597 10 -     19904 AT---------ACA------AC-T---G--A--
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 I 2
s Mungos_mungo.MunMun_flattened_line_8729                  144490 10 -    168139 AT---------GTC------AT-T---A--A--
i Mungos_mungo.MunMun_flattened_line_8729               C 0 I 2
s Murina_feae.MurFea_scaffold_2254                          19137 10 -    100666 AT---------GCT------AC-T---A--A--
i Murina_feae.MurFea_scaffold_2254                      C 0 I 2
s Mus_caroli.LT608236.1                                  70766197  7 +  92629107 -----------aat------aa-t---a-----
i Mus_caroli.LT608236.1                                 I 6 C 0
s Mus_musculus.chr16                                     75489256  7 +  98207768 -----------aat------aa-t---a-----
i Mus_musculus.chr16                                    I 6 C 0
s Mus_pahari.LT608305.1                                  67555484  7 +  89017189 -----------AAT------AA-T---a-----
i Mus_pahari.LT608305.1                                 I 6 C 0
s Mus_spretus.CM004110.1                                 74330434  7 +  97876770 -----------aat------aa-t---a-----
i Mus_spretus.CM004110.1                                I 6 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             11483  4 +     98495 --------------------TC-T---A-----
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 2 C 0
s Mustela_putorius.JH417978.1                             4423927 10 -  28371801 AT---------GTC------AT-T---A--A--
i Mustela_putorius.JH417978.1                           C 0 I 2
s Myocastor_coypus.MyoCoy_scaffold_3653                     89626  8 -    117718 AG----------CT------AT-T---A-----
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               967435 10 +   8389877 AT---------GCT------AC-C---A--A--
i Myotis_brandtii.KE161952.1                            C 0 I 2
s Myotis_davidii.KB114863.1                               5019110 10 +   6462685 AT---------GCT------AC-C---A--A--
i Myotis_davidii.KB114863.1                             C 0 I 2
s Myotis_lucifugus.GL429887.1                             3465016 10 -   3747815 AT---------GCT------AC-T---A--A--
i Myotis_lucifugus.GL429887.1                           C 0 I 2
s Myotis_myotis.MyoMyo_scaffold_6123                        10230 10 +     66751 AT---------GCT------AC-C---A--A--
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 I 2
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             4647  5 -      8794 --------------------AC-T---A--A--
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        I 2 I 2
s Nannospalax_galili.KL201303.1                            118041 15 +    362372 atgc-tatt--ttt------aa-t---a-----
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               8183 14 +     48152 AC---------GTT------AG-T---AAACTA
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4484460 10 -  14209539 AT---------GTC------AG-T---A--A--
i Neomonachus_schauinslandi.NINY01007774.1              C 0 I 2
s Neophocaena_asiaeorientalis.KZ688543.1                  3950608 10 -   4490290 AT---------GCA------AC-T---A--A--
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 I 2
s Noctilio_leporinus.NocLep_scaffold_12062                  48900  9 +     94413 GT---------GTT------AC-T---A-----
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_220265                             109 14 +      1763 AT---------GTT------AG-T---AAACTA
i Nomascus_annamensis.k141_220265                       C 0 C 0
s Nomascus_concolor.k141_226614                               902 14 -      5092 AT---------GTT------AG-T---AAACTA
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_642452                            1685 14 +      2851 AT---------GTT------AG-T---AAACTA
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             24620 14 -  18771707 AT---------GTT------AG-T---AAACTA
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  2323 14 +      4512 AT---------GTT------AG-T---AAACTA
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                30505 10 +   3668941 AT---------GTC------AT-T---A--A--
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 I 2
s Nycticebus_bengalensis.LG16                            65566731 12 -  95554990 at---------GGT------AT-T---A--CTA
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            3460 12 +      6470 AT---------GGT------AT-T---A--CTA
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65669070 12 +  89412551 at---------ggt------at-t---a--CTA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4995644  9 -  23139505 AT---------ATG------AC-T---A-----
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3685180  8 +  10294119 aa----------tt------ac-t---a-----
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             679125 10 -   3126709 AT---------GTC------AG-T---A--A--
i Odobenus_rosmarus.KB229369.1                          C 0 I 2
s Odocoileus_virginianus.KZ101650.1                       1079286 10 +   1425656 AT---------GCA------AC-T---A--A--
i Odocoileus_virginianus.KZ101650.1                     C 0 I 2
s Okapia_johnstoni.LVCL01S0017931.1                         36580 10 +     78940 AT---------GCA------AC-T---A--A--
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 I 2
s Ondatra_zibethicus.OndZib_scaffold_6821                  124939 15 +    145789 GTGC-TATT--ACT------AA-T---A-----
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  36740 15 +     62360 GTGC-TATT--ACT------AA-T---A-----
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7224290 10 -   7562323 AT---------GCA------AC-T---A--A--
i Orcinus_orca.KB316965.1                               C 0 I 2
s Orycteropus_afer.OryAfe_flattened_line_13509              57127  3 -     66828 -----------------------t---g--c--
i Orycteropus_afer.OryAfe_flattened_line_13509          I 6 I 2
s Oryctolagus_cuniculus.CM000803.1                      141875916  9 + 163896628 AT---------GTg------ac-t---a-----
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      307790 10 -    505867 AT---------ATC------AT-T---A--A--
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 I 2
s Otolemur_crassicaudatus.k141_505435                         356 12 -     53940 AT---------GGT------AC-T---A--CTA
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18008329 12 -  38779656 AT---------GGT------AC-T---A--Cta
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134076845 10 - 275406953 AT---------GCA------AC-T---A--A--
i Ovis_aries.CM001582.2                                 C 0 I 2
s Ovis_canadensis.OviCan_scaffold_6251                      78059 10 +    140051 AT---------GCA------AC-T---A--A--
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 I 2
s Pan_paniscus.CM003386.1                               127574328 14 - 205426864 AT---------GTT------AG-T---AAACTA
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120151481 14 - 196562556 AT---------GTT------AG-T---AAACTA
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  33916 10 +    295523 AT---------GTC------AT-T---A--A--
i Panthera_onca.PanOnc_flattened_line_1615              C 0 I 2
s Panthera_pardus.KV860323.1                              3637652 10 +  18214204 at---------gtc------AT-T---A--A--
i Panthera_pardus.KV860323.1                            C 0 I 2
s Panthera_tigris.KE721879.1                              5027325 10 -   6340057 at---------gtc------AT-T---A--A--
i Panthera_tigris.KE721879.1                            C 0 I 2
s Pantholops_hodgsonii.KE114631.1                         1065705 10 -   1292953 AT---------ACA------AC-T---A--A--
i Pantholops_hodgsonii.KE114631.1                       C 0 I 2
s Papio_anubis.CM001492.2                               188155917 14 - 188283584 AT---------GTT------AG-T---AAACTA
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             4233 14 +      5367 AT---------GTT------AG-T---AAACTA
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47513304 14 +  47705337 AT---------GTT------AG-T---AAACTA
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 67281 14 -    104429 AT---------GTT------AG-T---AAACTA
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    5814 14 +     14967 AT---------GTT------AG-T---AAACTA
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 1674 14 -      7628 AT---------GTT------AG-T---AAACTA
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    115367 10 -    135482 AT---------GTC------GT-T---A--A--
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 I 2
s Perodicticus_ibeanus.k141_117958                           5047 10 -     23713 at---------ggt------AT-T---A--A--
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            24356 10 -     27972 at---------ggt------aT-T---A--A--
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      44212  9 -     45160 AT---------TAC------AT-T---T-----
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4949977 15 -   8017169 GTGC-TGTt--act------aa-t---a-----
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    12093  9 -     36578 AAG---------CT------GC-T---A-----
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            120897 10 -    122454 AT---------GCA------AC-T---A--A--
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 I 2
s Piliocolobus_badius.k141_1987485                           1702 14 -      5908 AC---------GTT------AG-T---AAACTA
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       2326 14 -     17985 AC---------GTT------AG-T---AAACTA
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            1693 14 +      7694 AC---------GTT------AG-T---AAACTA
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26740171 14 +  26888534 AC---------GTT------AG-T---AAACTA
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            97054 10 +    112873 AT---------GCT------AC-T---A--A--
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 I 2
s Pithecia_albicans.k141_991845                             43306 14 -     61926 GT---------GTT------AG-T---AAACTA
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        24737 14 +     78826 GT---------GTT------AG-T---AAACTA
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              8686 14 -     15800 GT---------GTT------AG-T---AAACTA
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        11884 14 -     16101 GT---------GTT------AG-T---AAACTA
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          5193 14 +      9673 GT---------GTT------AG-T---AAACTA
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13474189 14 -  19735023 GT---------GTT------AG-T---AAACTA
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           13095 14 -     31692 GT---------GTT------AG-T---AAACTA
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           4977 10 +     21690 AT---------GCA------AC-T---A--A--
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 I 2
s Plecturocebus_bernhardi.k141_959214                       22528 14 +     44506 GT---------GTT------AG-T---AAACTA
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        22740 14 +     67491 GT---------GTT------AG-T---AAACTA
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      12979 14 -     98129 GT---------GTT------AG-T---AAACTA
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     22579 14 +    147771 GT---------GTT------AG-T---AAACTA
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        22834 14 -     23762 GT---------GTT------AG-T---AAACTA
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          3300 14 -     55515 GT---------GTT------AG-T---AAACTA
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         22653 14 +    152463 GT---------GTT------AG-T---AAACTA
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                        370 14 -    119457 GT---------GTT------AG-T---AAACTA
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         12375 14 +    134592 GT---------GTT------AG-T---AAACTA
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          22963 14 -     75465 GT---------GTT------AG-T---AAACTA
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              186854 14 -    373494 AT---------GTT------AG-T---AAACTA
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19807502 14 +  19899266 AT---------GTT------AG-T---AAACTA
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               5428 14 -     15069 AC---------GTT------AG-T---AAACTA
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              5562 14 +     14865 AC---------GTT------AG-T---AAACTA
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_467676                1235 10 -      1272 AT---------GAT------GA-T---A--A--
i Procavia_capensis.ProCapCap_scaffold_467676           C 0 I 2
s Prolemur_simus.MPIZ01000048.1                           6848227 12 +  12164890 AT---------GCT------Ac-t---a--ata
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coronatus.k141_1353159                         3284 12 +     11805 AT---------GCT------AT-T---A--GTA
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           42628 12 +     52369 AT---------ACT------AC-T---A--GTA
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         35016 12 -     44753 AT---------ACT------AC-T---A--GTA
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            16938 12 +     27322 AT---------ACT------AC-T---A--GTA
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       16574 12 -     53241 AT---------ACT------AC-T---A--GTA
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         38837 12 -     48185 AT---------GCT------AT-T---A--GTA
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           33906  9 +     77221 GTGC-TGTT--A---------------------
i Psammomys_obesus.NESX01026517.1                       C 0 I 3
s Pteronotus_parnellii.KE867983.1                            3451 10 -     27784 AT---------GCT------AC-T---A--A--
i Pteronotus_parnellii.KE867983.1                       C 0 I 2
s Pteronura_brasiliensis.PteBra_flattened_line_1343        246235 10 -    344369 AT---------GTC------AT-T---A--A--
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 I 2
s Pteropus_alecto.KB031157.1                             13245563 10 -  17261082 AT---------GCT------GC-T---A--A--
i Pteropus_alecto.KB031157.1                            C 0 I 2
s Pteropus_vampyrus.KN525959.1                             603510 10 -   3946241 AT---------GCT------AC-T---A--A--
i Pteropus_vampyrus.KN525959.1                          C 0 I 2
s Puma_concolor.QAVW01000427.1                          131533910 10 - 161321710 at---------gtc------aT-T---A--A--
i Puma_concolor.QAVW01000427.1                          C 0 I 2
s Pygathrix_cinerea.k141_374971                             29546 14 +     56732 AC---------GTT------AG-T---AAACTA
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6806037 14 +   6970761 AC---------GTT------AG-T---AAACTA
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             5431 14 +     18040 AC---------GTT------AG-T---AAACTA
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                15363 10 +     68503 AT---------GCA------AC-T---A--A--
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 I 2
s Rattus_norvegicus.chr11                                13915202  7 +  90463843 -----------aat------aa-t---a-----
i Rattus_norvegicus.chr11                               I 6 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1787399  7 +   2252614 AT---------GCT------AC-----------
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 I 2
s Rhinopithecus_bieti.k119_1391695                           1659 14 -      1866 AC---------GTT------AG-T---AAACTA
i Rhinopithecus_bieti.k119_1391695                      C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206377316 14 - 206558726 AT---------GTT------AG-T---AAACTA
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44856216 14 -  45163003 AC---------GTT------AG-T---AAACTA
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                18887 10 +    109198 AT---------GCT------GC-T---A--A--
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 I 2
s Saiga_tatarica.SaiTat_scaffold_82192                       7525 10 +     12214 AT---------GCA------AC-T---A--A--
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 I 2
s Saimiri_boliviensis.NW_024100938.1                     15672394 14 -  43202129 GT---------GTT------AG-T---AAACTA
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        4311 14 +     34089 GT---------GTT------AG-T---AAACTA
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              4252 14 -     60842 GT---------GTT------AG-T---AAACTA
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              4347 14 +     67014 GT---------GTT------AG-T---AAACTA
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              4325 14 +     60816 GT---------GTT------AG-T---AAACTA
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 4262 14 -     76454 GT---------GTT------AG-T---AAACTA
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17340987 14 -  30362882 GT---------GTT------AG-T---AAACTA
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         20346 14 -     62485 GT---------GTT------AG-T---AAACTA
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   31880 10 -    114521 AT---------ACT------AC-T---A--A--
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 I 2
s Semnopithecus_entellus.k141_1572367                        3043 14 +     15331 AT---------GTT------AG-T---AAACTA
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       8440 14 +     20762 AG---------GTT------AG-T---AAACTA
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         118442 14 +    130994 AC---------GTT------AG-T---AAACTA
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           37229 14 +     46263 AG---------GTT------AG-T---AAACTA
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     30343 14 +     42640 AT---------GTT------AG-T---AAACTA
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        13387 14 +     30600 AC---------GTT------AG-T---AAACTA
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   99933 15 -    120886 GTGC-TGTT--ACT------AA-T---A-----
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            18459 10 +    739146 AT---------ACT------AC-T---A--A--
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 I 2
s Spermophilus_dauricus.KZ294190.1                        2239388 12 +   2842873 at---------aat------ac-ttaga-----
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             234356 10 -    276980 AT---------GTC------AT-T---A--G--
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 I 2
s Suricata_suricatta.SurSur_flattened_line_20339            27169 10 +     62062 AT---------GTC------AT-T---A--A--
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 I 2
s Sus_scrofa.CM000824.4                                 189271442 10 + 218635234 AT---------GCA------AC-T---A--A--
i Sus_scrofa.CM000824.4                                 C 0 I 2
s Symphalangus_syndactylus.tarseq_24                        14601 14 -  13920577 AT---------GTT------AG-T---AAACTA
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               5623 10 -      6213 AT---------GCT------AC-T---A--A--
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 I 2
s Tamandua_tetradactyla.TamTet_scaffold_26877               14302 10 +     45698 AT---------GAC------AC-T---A--A--
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 I 2
s Tapirus_indicus.TapInd_scaffold_176                      806517 10 +   1148477 AT---------GCT------AC-T---A--A--
i Tapirus_indicus.TapInd_scaffold_176                   C 0 I 2
s Tapirus_terrestris.TapTer_scaffold_14939                  57208 10 +     99546 AT---------GTT------AC-T---A--A--
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 I 2
s Tarsius_lariang.k141_609102                               26132 12 +     42269 AT---------GCC------AC-T---A--ATG
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               59448 12 +     65473 AT---------GCC------AC-T---A--ATG
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194007444 14 - 194193292 AT---------GTT------AG-T---AAACTA
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             38917  9 -     47444 AAG---------CT------GC-T---A-----
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  5135 10 +      6782 AT---------GCT------AC-T---A--A--
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 I 2
s Tonatia_saurophila.TonSau_scaffold_3334                  135458  5 -    259118 --------------------AC-T---A--A--
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 I 2
s Trachypithecus_auratus.k141_738098                        26547 14 +     38948 AC---------ATT------AG-T---AAACTA
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   20276 14 -     32910 AC---------GTT------AG-T---AAACTA
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      1664 14 -     12939 AC---------ATT------AG-T---AAACTA
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       1599 14 -     14244 AC---------GTT------AG-T---AAACTA
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           42997 14 -     54611 AC---------GTT------AG-T---AAACTA
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                         803 14 -     11566 AC---------ATT------AG-T---AAACTA
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     2975 14 -     15592 AC---------GTT------AG-T---AAACTA
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          1632 14 +     14371 AC---------GTT------AG-T---AAACTA
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  51384 14 +     51589 AC---------GTT------AG-T---AAACTA
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       14565 14 +     14732 AC---------GTT------AG-T---AAACTA
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       5036 14 -     28054 AC---------GTT------AG-T---AAACTA
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44659836 14 -  44834318 AC---------GTT------AG-T---AAACTA
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       2140 14 +     13828 AC---------GTT------AG-T---AAACTA
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   4750 11 +     90398 AT---------GTA------ACTT---A--A--
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 I 2
s Trichechus_manatus.JH594618.1                          16084478 10 +  31416278 GT---------AAT------GA-T---A--A--
i Trichechus_manatus.JH594618.1                         C 0 I 2
s Tupaia_chinensis.KB320831.1                             2792501  9 -   3938065 AG---------GCA------AC-T---G-----
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    4706  9 +     13056 AT---------GCA------AC-T---A-----
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69313007 10 -  96451834 AT---------GCA------AC-T---A--A--
i Tursiops_truncatus.MRVK01000923.1                     C 0 I 2
s Uropsilus_gracilis.UroGra_scaffold_69449                    924 10 +     10241 AT---------GTT------CA-T---A--T--
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 I 2
s Ursus_maritimus.KK498671.1                              6514373 10 +  28682327 AT---------GTC------AT-T---A--A--
i Ursus_maritimus.KK498671.1                            C 0 I 2
s Varecia_rubra.k141_432109                                  4930 12 -     20643 AT---------GCT------AC-T---A--ATA
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             24471 12 -     33872 AT---------GCT------AC-T---A--ATA
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1524249 10 -   2331223 AT---------GCA------GC-T---A--A--
i Vicugna_pacos.KN269600.1                              C 0 I 2
s Vulpes_lagopus.VulLag_flattened_line_2045                137883 10 -    281493 AT---------GTC------AT-T---A--A--
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 I 2
s Xerus_inauris.XerIna_scaffold_7898                       126506 12 -    134049 GT---------GCT------AC-TTAGA-----
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        213851 10 -    227762 AT---------GTC------AG-T---A--A--
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 I 2
s Zapus_hudsonius.ZapHud_scaffold_64392                     14596  9 -     20485 AT---------ACT------AA-T---A-----
i Zapus_hudsonius.ZapHud_scaffold_64392                 I 3 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           6499 10 -      8775 AT---------GCA------AC-T---A--A--
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 I 2
e Sorex_araneus.JH798170.1                               17750754 3364 -  27805282 I
e Microgale_talazaci.MicTal_scaffold_34660                  33938  0 -     48017 C
e Elephantulus_edwardii.JH947210.1                        7804622 10712 +  15467074 I
e Echinops_telfairi.JH980316.1                           22997949  0 -  44670279 C
e Hylobates_pileatus_a.tarseq_592                             33391 319 -     60944 I
e Propithecus_coquerelli.NW_012147997.1                    667273 6500 -   2312742 I
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               11466  5 +    209709 AT---AA---------C
s Acinonyx_jubatus.LLWD01000356.1                         2033584  4 +   3721120 GC---AA----------
i Acinonyx_jubatus.LLWD01000356.1                       I 2 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    112219 11 -    189883 ------AGTATTTGTTA
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 I 4
s Ailuropoda_melanoleuca.LNAT01000321.1                  10656896  4 +  23371972 AC---AA----------
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 2 C 0
s Ailurus_fulgens.LNAC01000003.1                          7094240  4 -  16596857 AC---AA----------
i Ailurus_fulgens.LNAC01000003.1                        I 2 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   16523 11 -     22067 ------AGTACTTGTGC
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                    950  5 -     60446 AT---AA---------C
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         1673  5 -     29318 AT---AA---------C
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                          608  5 +     38766 AT---AA---------C
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          1567  5 -     80423 AT---AA---------C
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             9862  8 -     18050 ATAACAA---------C
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                 10955  8 -     11521 ATAACAA---------C
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                             10539  8 -     21359 ATAACAA---------C
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                 154  8 +      2129 ATAACTA---------C
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          9838  8 -     10438 ATAACAA---------C
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            6494  8 +      7047 ATAACAA---------C
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             9774  8 +     10410 ATAACAA---------C
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            3582  8 -      4927 ATAACTA---------C
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3519715  4 +   4113121 GC---AA----------
i Ammotragus_lervia.NIVO01013474.1                      I 2 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      389911  4 -    631301 AA---AA----------
i Anoura_caudifer.AnoCau_scaffold_422                   I 2 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            30298  4 +     33004 GT---AT----------
i Antilocapra_americana.AntAmePen_scaffold_42841        I 2 C 0
s Aotus_azarae.k141_3170768                                 62228  8 +     78111 ATAACAA---------C
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            5169  8 +     22701 ATAACAA---------C
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5749126  8 +   9889416 ATAACAA---------C
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             5713  8 -    104377 ATAACAA---------C
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               5715  8 +     23246 ATAACAA---------C
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     3333  2 +      5067 ------A---------T
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 I 10
s Arctocebus_calabarensis.k141_587554                         661  4 +      9265 -T---AA---------T
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 8322  4 -     29036 AT---AA----------
i Artibeus_jamaicensis.ArtJam_scaffold_41619            I 2 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9538971  8 +  39197703 ACAACAA---------C
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             60242  8 +     85812 ACAACAA---------C
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                11254  8 +     89302 ACAACAA---------C
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             15759  8 -     58268 ACAACAA---------C
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             63750  8 +    119057 ACAACAA---------C
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               5719  8 -     25888 ACAACAA---------C
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 6380  5 -     16375 AT---AG---------C
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_2689020                              2700  5 +      2719 AT---AG---------C
i Avahi_peyrierasi.k141_2689020                         C 0 N 0
s Balaenoptera_acutorostrata.KI537095.1                  26379739  4 +  51448160 AC---AA----------
i Balaenoptera_acutorostrata.KI537095.1                 I 2 C 0
s Balaenoptera_bonaerensis.DF502048.1                        4970  4 -     13118 AC---AA----------
i Balaenoptera_bonaerensis.DF502048.1                   I 2 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   42778  4 -     72089 GC---AA----------
i Beatragus_hunteri.BeaHun_scaffold_21644               I 2 C 0
s Bison_bison.KN264915.1                                  6559453  3 +   6870073 GC----A----------
i Bison_bison.KN264915.1                                I 2 C 0
s Bos_indicus.CM003021.1                                138139557  3 - 161108492 GC----A----------
i Bos_indicus.CM003021.1                                I 2 C 0
s Bos_mutus.JH883513.1                                     572094  3 -    998990 GC----A----------
i Bos_mutus.JH883513.1                                  I 2 C 0
s Bos_taurus.CM000177.6                                 136295290  3 - 158972876 GC----A----------
i Bos_taurus.CM000177.6                                 I 2 C 0
s Bubalus_bubalis.KI419065.1                              1232373  3 -   1914593 GC----A----------
i Bubalus_bubalis.KI419065.1                            I 2 C 0
s Cacajao_ayresi.k141_724503                               113612  8 -    171031 ATAACAA---------C
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 12643  8 +    125063 ATAACAA---------C
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                14688  8 -    216513 ATAACAA---------C
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        7228  8 -    134917 ATAACAA---------C
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3219157  2 -   8989139 AC---------------
i Camelus_bactrianus.KN276303.1                         I 2 I 2
s Camelus_dromedarius.KN271192.1                           396859  2 -  15254737 AC---------------
i Camelus_dromedarius.KN271192.1                        I 2 I 2
s Camelus_ferus.KB016973.1                                2972594  2 +   6889770 AC---------------
i Camelus_ferus.KB016973.1                              I 2 I 2
s CanFam4.chr31                                          11519055  4 +  39901454 AC---AA----------
i CanFam4.chr31                                         I 2 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   14080  4 +     87036 AC---AA----------
i Canis_lupus_VD.CanFam_VD_scaffold_16982               I 2 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11265722  4 -  35597290 AC---AA----------
i Canis_lupus_dingo.QKWQ01001993.1                      I 2 C 0
s Canis_lupus_familiaris.chr31                           11088256  4 +  39895921 AC---AA----------
i Canis_lupus_familiaris.chr31                          I 2 C 0
s Canis_lupus_orion.HG994411.1                           16455271  4 -  44759192 AC---AA----------
i Canis_lupus_orion.HG994411.1                          I 2 C 0
s Capra_aegagrus.CM003214.1                              21324791  4 + 157394656 GC---AA----------
i Capra_aegagrus.CM003214.1                             I 2 C 0
s Capra_hircus.CM004562.1                               135706018  4 - 157403528 GC---AA----------
i Capra_hircus.CM004562.1                               I 2 C 0
s Carlito_syrichta.NW_007248099.1                          308662  7 +    345090 at-taaa---------t
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               59114  2 +     67245 -----AA----------
i Carollia_perspicillata.CarPer_scaffold_4436           I 1 C 0
s Castor_canadensis.CasCan_scaffold_47037                   30338  1 +     33760 ------A----------
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   158466  4 -    276539 AC---AA----------
i Catagonus_wagneri.CatWag_scaffold_1305                I 2 I 7
s Cavia_aperea.AVPZ01000278.1                            15786208  2 -  24422027 ------N---------N
i Cavia_aperea.AVPZ01000278.1                           C 0 I 10
s Cavia_porcellus.DS562889.1                             15798143  2 -  24440124 ------a---------g
i Cavia_porcellus.DS562889.1                            C 0 I 10
s Cavia_tschudii.CavTsc_scaffold_488                       176334  2 +    436027 ------A---------G
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 I 10
s Cebus_albifrons.Contig22                               18890457  8 -  29618158 ATAACAA---------C
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 8001  8 -     26817 ATAACAA---------C
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                12241  8 +     25043 ATAACAA---------C
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         7696  7 +     21754 ATTA-AA---------T
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4363469  4 +   7569818 AC---AA----------
i Ceratotherium_simum.JH767818.1                        I 2 I 2
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         3226  4 -      9338 AC---AA----------
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    I 2 I 2
s Cercocebus_atys.KQ010443.1                              6554895  5 +   6739814 AT---AA---------C
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      26372  5 +     60454 AT---AA---------C
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          1577  5 -     21101 AT---AA---------C
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         58887  5 -    107033 AT---AA---------C
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        1779  5 -     17608 AT---AA---------C
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          29274  5 +     30494 AT---AA---------C
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          58120  5 -     59240 AT---AA---------C
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          1821  5 +     16677 AT---AA---------C
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           23979  5 +     35983 AT---AA---------C
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11990507  5 +  12117833 AT---AA---------C
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46477265  5 +  46592721 AT---AA---------C
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      40816  5 -     45581 AT---AA---------C
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       1822  5 +     35577 AT---AA---------C
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        1598  5 -     25661 AT---AA---------C
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        1576  5 -     17744 AT---AA---------C
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        21192  5 +     37128 AT---AA---------C
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           2399  3 -      6963 AC---A-----------
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      I 2 C 0
s Cheirogaleus_major.k141_1157592                           58666  5 -     68416 AT---AA---------C
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            7710  5 +     13308 AT---AA---------C
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             5258  8 -     18223 ATAACAA---------C
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             22281  8 +     25473 ATAACAA---------C
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           41316  8 +     57117 ATAACAA---------C
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          45995  8 +     54541 ATAACAA---------C
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15961370  2 +  43084221 ------a---------g
i Chinchilla_lanigera.JH721867.1                        C 0 I 12
s Chiropotes_israelita.k141_1189915                         70819  8 +    196370 ATAACAA---------C
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          14999  8 +     40510 ATAACAA---------C
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15138738  5 -  15256731 AT---AA---------C
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      33785  5 -     53260 AT---AA---------C
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101144349  5 + 101219884 AT---AA---------C
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                16084  3 -     21363 AC---A-----------
i Choloepus_didactylus.ChoDid_scaffold_36182            I 2 C 0
s Choloepus_hoffmanni.KN194586.1                           761391  3 +    964067 AC---A-----------
i Choloepus_hoffmanni.KN194586.1                        I 2 C 0
s Colobus_angolensis.KN985967.1                          10886115  5 +  10971483 AT---AA---------C
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147664279  5 + 156195979 AT---AA---------C
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            16264  5 +     23629 AT---AA---------C
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60613213  2 +  78930452 AC---------------
i Condylura_cristata.JH655880.1                         I 2 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         39297  4 -     40477 AC---AA----------
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     I 2 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 278172 11 -    399297 ------AGTATTCATCA
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 I 4
s Cricetulus_griseus.LT883672.1                          53028855 11 +  72327488 ------CATATGTGTTA
i Cricetulus_griseus.LT883672.1                         C 0 I 4
s Crocidura_indochinensis.CroInd_scaffold_88140              1590  1 +     11655 -----A-----------
i Crocidura_indochinensis.CroInd_scaffold_88140         I 3 I 4
s Cryptoprocta_ferox.CryFer_flattened_line_19014            51601  4 -     70449 AC---AA----------
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 2 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  207783  2 -    956709 ------G---------T
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 30358  2 -     67205 ------A---------G
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 I 8
s Cuniculus_paca.CunPac_flattened_line_16637                17390  2 +     26546 ------A---------G
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 I 12
s Dasyprocta_punctata.DasPun_flattened_line_634             58475  2 -    236241 ------A---------G
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 I 12
s Dasypus_novemcinctus.JH568778.1                          183273  3 -   6883506 AC---A-----------
i Dasypus_novemcinctus.JH568778.1                       I 2 C 0
s Daubentonia_madagascariensis.ctg11                     16844525  5 +  31942871 AT---AA---------C
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80036417  4 -  96802777 AC---AA----------
i Delphinapterus_leucas.KZ290064.1                      I 2 C 0
s Desmodus_rotundus.KZ672188.1                           18698387  4 -  18957592 AC---AA----------
i Desmodus_rotundus.KZ672188.1                          I 2 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 322121  1 +    993696 A----------------
i Dicerorhinus_sumatrensis.PEKH010003161.1              I 2 I 2
s Diceros_bicornis.DicBicMic_scaffold_9545                   2771  4 +    151128 AC---AA----------
i Diceros_bicornis.DicBicMic_scaffold_9545              I 2 I 2
s Dinomys_branickii.DinBra_scaffold_1996                   156627  2 +    228994 ------A---------G
i Dinomys_branickii.DinBra_scaffold_1996                C 0 I 12
s Dipodomys_ordii.KN672545.1                              3655971  2 +   4240102 ------t---------c
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 27604  2 +     28912 ------T---------C
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                35726  2 -     73477 ------A---------G
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 I 12
s Eidolon_helvum.KE772537.1                                 11820  4 +     24177 AC---AA----------
i Eidolon_helvum.KE772537.1                             I 2 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1491067  4 +   1727528 GC---AA----------
i Elaphurus_davidianus.JRFZ01086400.1                   I 2 C 0
s Ellobius_lutescens.LOEQ01003611.1                        239402 11 -    369425 ------tatatttgtta
i Ellobius_lutescens.LOEQ01003611.1                     C 0 I 4
s Ellobius_talpinus.LOJH01090055.1                           6515 11 -      7838 ------gatatttgtta
i Ellobius_talpinus.LOJH01090055.1                      C 0 I 4
s Enhydra_lutris.KZ291749.1                              85871759  4 +  99434291 AC---AA----------
i Enhydra_lutris.KZ291749.1                             I 2 C 0
s Eptesicus_fuscus.JH977687.1                             4703766  4 +   6522550 AC---AA----------
i Eptesicus_fuscus.JH977687.1                           I 2 C 0
s Equus_asinus.JREZ01000062.1                             5852572  4 -   7175178 AC---AA----------
i Equus_asinus.JREZ01000062.1                           I 2 I 2
s Equus_caballus.CM000402.2                              13351075  4 +  41866177 AC---AA----------
i Equus_caballus.CM000402.2                             I 2 I 2
s Equus_przewalskii.ATBW01073585.1                          12565  4 +     92910 AC---AA----------
i Equus_przewalskii.ATBW01073585.1                      I 2 I 2
s Erinaceus_europaeus.JH835290.1                         11534142  1 +  16010500 -----a-----------
i Erinaceus_europaeus.JH835290.1                        I 936 I 4
s Erythrocebus_patas.Contig8                             48770916  5 -  48907691 AT---AA---------C
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          314623  4 +    330699 AC---AA----------
i Eschrichtius_robustus.EscRob_flattened_line_685       I 2 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             61077  4 +     89355 AC---AA----------
i Eubalaena_japonica.EubJap_flattened_line_7756         I 2 C 0
s Eulemur_albifrons.k141_715837                              4718  5 +     13586 AT---AA---------C
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               4654  5 -      6809 AT---AA---------C
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            11127  5 +     36558 AT---AA---------C
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             7447  5 +     60246 AT---AA---------C
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                10925  5 +    109717 AT---AA---------C
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               15309  5 +     16540 AT---AA---------C
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                15583  5 +     27497 AT---AA---------C
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           18039  5 +     26808 AT---AA---------C
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                32775  5 +     46535 AT---AA---------C
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              15497  5 -     29447 AT---AA---------C
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus_fca126.CM031420.1                         129279630  4 - 158578461 GC---AA----------
i Felis_catus_fca126.CM031420.1                         I 2 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 20775  4 +     52776 GC---AA----------
i Felis_nigripes.FelNig_flattened_line_8080             I 2 C 0
s Galago_moholi.ctg555                                     210548  5 -    847004 AT---AA---------T
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           12927  5 -     43889 AT---AA---------T
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          10002  5 +     27357 AT---AA---------T
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               155887  5 +    324696 AC---AA---------C
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    180864  4 -    189561 GC---AA----------
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 2 C 0
s Glis_glis.GliGli_scaffold_79770                           12704  2 -     18683 ------A---------T
i Glis_glis.GliGli_scaffold_79770                       C 0 I 8
s Gorilla_beringei.k141_111300                               4982  5 -     14630 AT---AA---------C
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119652081  5 - 195582420 AT---AA---------C
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   77249  2 +    118900 ------A---------T
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 I 8
s Hapalemur_alaotrensis.k141_1280836                         1497  5 +     10286 AT---AA---------T
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_1254239                            9673  5 +      9690 AT---AA---------T
i Hapalemur_gilberti.k141_1254239                       C 0 C 0
s Hapalemur_griseus.k141_1387522                             5303  5 +     56096 AT---AA---------T
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        28553  5 -     42470 AT---AA---------T
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        45176  5 -     54384 AT---AA---------T
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              16806  4 +     53719 AC---AA----------
i Helogale_parvula.HelPar_flattened_line_22962          I 2 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                27063  4 -     91191 GC---AA----------
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 2 C 0
s Heterocephalus_glaber.JH602058.1                        2550706  2 +  31725842 ------a---------g
i Heterocephalus_glaber.JH602058.1                      C 0 I 12
s Heterohyrax_brucei.HetBruBak_scaffold_25354               60134  3 +     73687 AG---A-----------
i Heterohyrax_brucei.HetBruBak_scaffold_25354           I 2 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              146711  4 +    277961 AC---AA----------
i Hippopotamus_amphibius.HipAmp_scaffold_1308           I 2 C 0
s Hipposideros_armiger.JXIK01001085.1                      277988  4 -    477199 AC---AA----------
i Hipposideros_armiger.JXIK01001085.1                   I 2 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              7135  4 -      9143 AC---AA----------
i Hipposideros_galeritus.HipGal_scaffold_104691         I 1 C 0
s Hoolock_leuconedys.ctg79                                      4388  5 -   7690867 AT---AA---------C
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 16878  4 -     67322 AC---AA----------
i Hyaena_hyaena.HyaHya_flattened_line_20729             I 2 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           18587  2 -    119109 ------A---------T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 I 12
s Hylobates_abbotti.k141_493872                              4814  5 +      5897 AT---AA---------C
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_624065                               1678  5 +      2112 AT---AA---------C
i Hylobates_agilis.k141_624065                          C 0 C 0
s Hylobates_klossii.k141_466549                             11254  5 +     11537 AT---AA---------C
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14624359  5 -  25970782 AT---AA---------C
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            1615  5 -      2977 AT---AA---------C
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7125482  2 +  13083262 ------a---------c
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 I 8
s Indri_indri.k141_4418183                                   1146  5 -      1457 AT---AA---------C
i Indri_indri.k141_4418183                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               8617  4 +     17520 AC---AA----------
i Inia_geoffrensis.IniGeo_flattened_line_66725          I 2 I 7
s Jaculus_jaculus.JH725517.1                              8565533 11 +  11848649 ------AGTACTTGTGC
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               23233  4 +     37189 AG---AA----------
i Kogia_breviceps.KogBre_flattened_line_35920           I 2 C 0
s Lagothrix_lagothricha.k141_12968                          49839  8 -    147782 ATAACAA---------C
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   113857  4 -    115756 AC---AA----------
i Lasiurus_borealis.LasBor_scaffold_5102                I 2 C 0
s Lemur_catta.scaffold_1                                258406858  5 - 285822530 AT---AA---------C
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        23612  4 +     39228 AG---AA----------
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            52998  2 +     63517 -----AA----------
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        78255  4 +    116806 AG---AA----------
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     31251  4 -     33031 AG---AA----------
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3085567  4 -   3498232 AC---AA----------
i Leptonychotes_weddellii.KB714749.1                    I 2 C 0
s Lepus_americanus.LepAme_scaffold_62849                    12887  2 +     22452 ------A---------T
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            135570  4 +   3060487 AC---AA----------
i Lipotes_vexillifer.KE558548.1                         I 2 C 0
s Lophocebus_aterrimus.ctg55                             19247981  5 +  19376315 AT---AA---------C
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           10308  5 +     84689 AT---AA---------T
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3778057  5 +   6799190 AT---AA---------T
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20593833  3 -  62548349 AC---A-----------
i Loxodonta_africana.GL010040.1                         I 2 C 0
s Lycaon_pictus.CM007556.1                               11087712  4 +  39895028 AC---AA----------
i Lycaon_pictus.CM007556.1                              I 2 C 0
s Macaca_arctoides.k141_2201161                             19724  5 +     74745 AT---AA---------C
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12706180  5 +  12821369 AT---AA---------C
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                1825  5 -      3136 AT---AA---------C
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           46642  5 +     63263 AT---AA---------C
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                 1345  5 -      2568 AT---AA---------C
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 1931  5 -      7381 AT---AA---------C
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  45149  5 -     79256 AT---AA---------C
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196035257  5 + 196197964 AT---AA---------C
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11445425  5 +  11645122 AT---AA---------C
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   4096  5 -     46448 AT---AA---------C
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                1768  5 -     13212 AT---AA---------C
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 15449  5 -     55006 AT---AA---------C
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43840566  5 +  43892939 AT---AA---------C
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               16735  5 -     24607 AT---AA---------C
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               4101  5 -     27140 AT---AA---------C
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                701193  4 +    802869 AC---AA----------
i Macroglossus_sobrinus.MacSob_scaffold_879             I 2 C 0
s Mandrillus_leucophaeus.scaffold125                     43437143  5 -  43563597 AT---AA---------C
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4449969  5 -   4543643 AT---AA---------C
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36873324  2 +  64221397 ------a---------c
i Marmota_marmota.CZRN01000005.1                        C 0 I 7
s Megaderma_lyra.MegLyr_scaffold_3562                       64009  4 -    234502 AC---AA----------
i Megaderma_lyra.MegLyr_scaffold_3562                   I 2 C 0
s Mellivora_capensis.MelCap_flattened_line_15433              572  4 -     87323 AC---AA----------
i Mellivora_capensis.MelCap_flattened_line_15433        I 2 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               12366 11 +     15977 ------AATATTTGTTA
i Meriones_unguiculatus.MerUng_scaffold_52233           I 3 I 4
s Mesocricetus_auratus.KB708139.1                         1046564 11 -  26018355 ------catatttgtta
i Mesocricetus_auratus.KB708139.1                       C 0 I 4
s Microcebus_murinus.CM007691.1                          16509881  5 +  47401472 at---aa---------c
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               22294  4 -     32043 AC---AA----------
i Micronycteris_hirsuta.MicHir_scaffold_37978           I 2 C 0
s Microtus_ochrogaster.CM001673.1                        22819701 11 -  98408828 ------gatatttgtta
i Microtus_ochrogaster.CM001673.1                       C 0 I 4
s Miniopterus_natalensis.LDJU01000022.1                   8209293  3 +  10048721 AC---A-----------
i Miniopterus_natalensis.LDJU01000022.1                 I 2 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            33946  4 +     45743 AC---AA----------
i Miniopterus_schreibersii.MinSch_scaffold_24116        I 2 C 0
s Miopithecus_ogouensis.k141_2935907                         1696  5 +     29742 AT---AA---------C
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        11080  4 -    104932 AC---AA----------
i Mirounga_angustirostris.MirAng_flattened_line_8852    I 2 C 0
s Mirza_zaza.k141_226143                                     5267  5 +      8497 AT---AA---------C
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 146005  4 +    154973 AC---AA----------
i Monodon_monoceros.MonMon_M_scaffold_5598              I 2 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                160816  4 +    265003 AC---AA----------
i Mormoops_blainvillei.MorMeg_scaffold_2952             I 2 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                   609  4 -     19904 GC---AA----------
i Moschus_moschiferus.MosMos_scaffold_78805             I 2 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  144502  4 -    168139 AC---AA----------
i Mungos_mungo.MunMun_flattened_line_8729               I 2 C 0
s Murina_feae.MurFea_scaffold_2254                          19149  4 -    100666 AC---AA----------
i Murina_feae.MurFea_scaffold_2254                      I 2 C 0
s Mus_caroli.LT608236.1                                  70766204 11 +  92629107 ------aaaatttgtta
i Mus_caroli.LT608236.1                                 C 0 I 4
s Mus_musculus.chr16                                     75489263 11 +  98207768 ------aatatttgtta
i Mus_musculus.chr16                                    C 0 I 4
s Mus_pahari.LT608305.1                                  67555491 11 +  89017189 ------agtatttgtta
i Mus_pahari.LT608305.1                                 C 0 I 4
s Mus_spretus.CM004110.1                                 74330441 11 +  97876770 ------aatatttgtta
i Mus_spretus.CM004110.1                                C 0 I 4
s Muscardinus_avellanarius.MusAve_scaffold_9643             11487  2 +     98495 ------A---------T
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 I 8
s Mustela_putorius.JH417978.1                             4423939  4 -  28371801 AC---AA----------
i Mustela_putorius.JH417978.1                           I 2 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     89634  2 -    117718 ------A---------G
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 I 12
s Myotis_brandtii.KE161952.1                               967447  4 +   8389877 AC---AA----------
i Myotis_brandtii.KE161952.1                            I 2 C 0
s Myotis_davidii.KB114863.1                               5019122  4 +   6462685 ac---aa----------
i Myotis_davidii.KB114863.1                             I 2 C 0
s Myotis_lucifugus.GL429887.1                             3465028  4 -   3747815 AC---AA----------
i Myotis_lucifugus.GL429887.1                           I 2 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        10242  4 +     66751 AC---AA----------
i Myotis_myotis.MyoMyo_scaffold_6123                    I 2 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             4654  3 -      8794 AC---A-----------
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        I 2 C 0
s Nannospalax_galili.KL201303.1                            118056 11 +    362372 ------atcattttttt
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               8197  5 +     48152 AT---AA---------C
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4484472  4 -  14209539 AC---AA----------
i Neomonachus_schauinslandi.NINY01007774.1              I 2 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3950620  4 -   4490290 AC---AA----------
i Neophocaena_asiaeorientalis.KZ688543.1                I 2 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  48909  4 +     94413 AC---AG----------
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_220265                             123  5 +      1763 AT---AA---------C
i Nomascus_annamensis.k141_220265                       C 0 I 17
s Nomascus_concolor.k141_226614                               916  5 -      5092 AT---AA---------C
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_642452                            1699  5 +      2851 AT---AA---------C
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             24634  5 -  18771707 AT---AA---------C
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  2337  5 +      4512 AT---AA---------C
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                30517  4 +   3668941 AC---AA----------
i Nyctereutes_procyonoides.CAJHUB010000786.1            I 2 C 0
s Nycticebus_bengalensis.LG16                            65566743  5 -  95554990 AT---AA---------T
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            3472  5 +      6470 AT---AA---------T
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65669082  3 +  89412551 AT---A-----------
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4995653  2 -  23139505 ------A---------T
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3685188  2 +  10294119 ------a---------g
i Octodon_degus.JH651621.1                              C 0 I 12
s Odobenus_rosmarus.KB229369.1                             679137  4 -   3126709 AC---AA----------
i Odobenus_rosmarus.KB229369.1                          I 2 C 0
s Odocoileus_virginianus.KZ101650.1                       1079298  4 +   1425656 GC---AA----------
i Odocoileus_virginianus.KZ101650.1                     I 2 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         36592  4 +     78940 GC---AA----------
i Okapia_johnstoni.LVCL01S0017931.1                     I 2 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  124954 11 +    145789 ------GATATTTGTTA
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 I 4
s Onychomys_torridus.OnyTor_scaffold_12578                  36755 11 +     62360 ------AATATTTGTTA
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 I 4
s Orcinus_orca.KB316965.1                                 7224302  4 -   7562323 AC---AA----------
i Orcinus_orca.KB316965.1                               I 2 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              57132  5 -     66828 cc---ag---------a
i Orycteropus_afer.OryAfe_flattened_line_13509          I 2 I 6
s Oryctolagus_cuniculus.CM000803.1                      141875925  2 + 163896628 ------a---------t
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      307802  4 -    505867 AC---AA----------
i Otocyon_megalotis.JAEUCK010005121.1                   I 2 C 0
s Otolemur_crassicaudatus.k141_505435                         368  5 -     53940 AT---AA---------T
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18008341  5 -  38779656 at---aa---------t
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134076857  4 - 275406953 GC---AA----------
i Ovis_aries.CM001582.2                                 I 2 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      78071  4 +    140051 GC---AA----------
i Ovis_canadensis.OviCan_scaffold_6251                  I 2 C 0
s Pan_paniscus.CM003386.1                               127574342  5 - 205426864 AT---AA---------C
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120151495  5 - 196562556 AT---AA---------C
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  33928  4 +    295523 GC---AA----------
i Panthera_onca.PanOnc_flattened_line_1615              I 2 C 0
s Panthera_pardus.KV860323.1                              3637664  4 +  18214204 GC---AA----------
i Panthera_pardus.KV860323.1                            I 2 C 0
s Panthera_tigris.KE721879.1                              5027337  4 -   6340057 GC---AA----------
i Panthera_tigris.KE721879.1                            I 2 C 0
s Pantholops_hodgsonii.KE114631.1                         1065717  4 -   1292953 GC---AA----------
i Pantholops_hodgsonii.KE114631.1                       I 2 C 0
s Papio_anubis.CM001492.2                               188155931  5 - 188283584 AT---AA---------C
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             4247  5 +      5367 AT---AA---------C
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47513318  5 +  47705337 AT---AA---------C
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 67295  5 -    104429 AT---AA---------C
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    5828  5 +     14967 AT---AA---------C
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 1688  5 -      7628 AT---AA---------C
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    115379  4 -    135482 AC---AA----------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 I 2 C 0
s Perodicticus_ibeanus.k141_117958                           5057  4 -     23713 -T---AA---------T
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            24366  4 -     27972 -T---AA---------T
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      44221  2 -     45160 ------T---------T
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4949992 11 -   8017169 ------aatatttgtta
i Peromyscus_maniculatus.KI615518.1                     C 0 I 4
s Petromus_typicus.PetTyp_scaffold_33007                    12102  2 -     36578 ------A---------G
i Petromus_typicus.PetTyp_scaffold_33007                C 0 I 8
s Phocoena_phocoena.PhoPho_flattened_line_11948            120909  4 -    122454 AC---AA----------
i Phocoena_phocoena.PhoPho_flattened_line_11948         I 2 C 0
s Piliocolobus_badius.k141_1987485                           1716  5 -      5908 AT---AA---------C
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       2340  5 -     17985 AT---AA---------C
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            1707  5 +      7694 AT---AA---------C
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26740185  5 +  26888534 AT---AA---------C
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            97066  4 +    112873 AC---AA----------
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        I 2 C 0
s Pithecia_albicans.k141_991845                             43320  8 -     61926 ATAACAA---------C
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        24751  8 +     78826 ATAACAA---------C
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              8700  8 -     15800 ATAACAA---------C
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        11898  8 -     16101 ATAACAA---------C
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          5207  8 +      9673 ATAACAA---------C
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13474203  8 -  19735023 ATAACAA---------C
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           13109  8 -     31692 ATAACAA---------C
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           4989  4 +     21690 AC---AA----------
i Platanista_gangetica.PlaMin_flattened_line_72990      I 2 C 0
s Plecturocebus_bernhardi.k141_959214                       22542  8 +     44506 ATAACAA---------C
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        22754  8 +     67491 ATAACAA---------C
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      12993  8 -     98129 ATAACAA---------C
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     22593  8 +    147771 ATAACAA---------C
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        22848  8 -     23762 ATAACAA---------C
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          3314  8 -     55515 ATAACAA---------C
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         22667  8 +    152463 ATAACAA---------C
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                        384  8 -    119457 ATAACAA---------C
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         12389  8 +    134592 ATAACAA---------C
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          22977  8 -     75465 ATAACAA---------C
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              186868  5 -    373494 AT---AA---------C
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19807516  5 +  19899266 AT---AA---------C
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               5442  5 -     15069 AT---AA---------C
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              5576  5 +     14865 AT---AA---------C
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_467676                1247  3 -      1272 AG---A-----------
i Procavia_capensis.ProCapCap_scaffold_467676           I 2 n 2
s Prolemur_simus.MPIZ01000048.1                           6848239  5 +  12164890 at---aa---------c
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coronatus.k141_1353159                         3296  5 +     11805 AT---AA---------C
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           42640  5 +     52369 AT---AA---------C
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         35028  5 -     44753 AT---AA---------C
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            16950  5 +     27322 AT---AA---------C
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       16586  5 -     53241 AT---AA---------C
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         38849  5 -     48185 AT---AA---------C
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           33918 11 +     77221 ------aatatttgtta
i Psammomys_obesus.NESX01026517.1                       I 3 I 4
s Pteronotus_parnellii.KE867983.1                            3463  4 -     27784 AC---AA----------
i Pteronotus_parnellii.KE867983.1                       I 2 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        246247  4 -    344369 AC---AA----------
i Pteronura_brasiliensis.PteBra_flattened_line_1343     I 2 C 0
s Pteropus_alecto.KB031157.1                             13245575  1 -  17261082 A----------------
i Pteropus_alecto.KB031157.1                            I 2 C 0
s Pteropus_vampyrus.KN525959.1                             603522  4 -   3946241 AC---AA----------
i Pteropus_vampyrus.KN525959.1                          I 2 C 0
s Puma_concolor.QAVW01000427.1                          131533922  4 - 161321710 GC---AA----------
i Puma_concolor.QAVW01000427.1                          I 2 C 0
s Pygathrix_cinerea.k141_374971                             29560  5 +     56732 AT---AA---------C
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6806051  5 +   6970761 AT---AA---------C
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             5445  5 +     18040 AT---AA---------C
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                15375  4 +     68503 GC---AA----------
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 2 C 0
s Rattus_norvegicus.chr11                                13915209 11 +  90463843 ------aatatttgtta
i Rattus_norvegicus.chr11                               C 0 I 4
s Rhinolophus_sinicus.LVEH01000179.1                      1787408  4 +   2252614 AC---AA----------
i Rhinolophus_sinicus.LVEH01000179.1                    I 2 C 0
s Rhinopithecus_bieti.k119_1391695                           1673  5 -      1866 AT---AA---------C
i Rhinopithecus_bieti.k119_1391695                      C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206377330  5 - 206558726 AT---AA---------C
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44856230  5 -  45163003 AT---AA---------C
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                18899  4 +    109198 AC---AA----------
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            I 2 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       7537  4 +     12214 GC---AA----------
i Saiga_tatarica.SaiTat_scaffold_82192                  I 2 C 0
s Saimiri_boliviensis.NW_024100938.1                     15672408  8 -  43202129 ATAACAA---------C
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        4325  8 +     34089 ATAACAA---------C
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              4266  8 -     60842 ATAACAA---------C
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              4361  8 +     67014 ATAACAA---------C
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              4339  8 +     60816 ATAACAA---------C
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 4276  8 -     76454 ATAACAA---------C
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17341001  8 -  30362882 ATAACAA---------C
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         20360  8 -     62485 ATAACAA---------C
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   31892  2 -    114521 AC---------------
i Scalopus_aquaticus.ScaAqu_scaffold_9300               I 2 C 0
s Semnopithecus_entellus.k141_1572367                        3057  5 +     15331 AT---AA---------C
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       8454  5 +     20762 AT---AA---------C
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         118456  5 +    130994 AT---AA---------C
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           37243  5 +     46263 AT---AA---------C
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     30357  5 +     42640 AT---AA---------C
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        13401  5 +     30600 AT---AA---------C
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   99948 11 -    120886 ------AACCTTTCTTA
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 I 4
s Solenodon_paradoxus.SolPar_flattened_line_1012            18471  5 +    739146 AC---AG---------A
i Solenodon_paradoxus.SolPar_flattened_line_1012        I 2 C 0
s Spermophilus_dauricus.KZ294190.1                        2239400  2 +   2842873 ------a---------c
i Spermophilus_dauricus.KZ294190.1                      C 0 I 8
s Spilogale_gracilis.SpiGra_flattened_line_905             234368  4 -    276980 AC---AA----------
i Spilogale_gracilis.SpiGra_flattened_line_905          I 2 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            27181  4 +     62062 AC---AA----------
i Suricata_suricatta.SurSur_flattened_line_20339        I 2 C 0
s Sus_scrofa.CM000824.4                                 189271454  4 + 218635234 GC---AA----------
i Sus_scrofa.CM000824.4                                 I 2 C 0
s Symphalangus_syndactylus.tarseq_24                        14615  5 -  13920577 AT---AA---------C
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               5635  4 -      6213 AC---AA----------
i Tadarida_brasiliensis.TadBra_scaffold_145589          I 2 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               14314  3 +     45698 AC---A-----------
i Tamandua_tetradactyla.TamTet_scaffold_26877           I 2 C 0
s Tapirus_indicus.TapInd_scaffold_176                      806529  4 +   1148477 AC---AA----------
i Tapirus_indicus.TapInd_scaffold_176                   I 2 I 2
s Tapirus_terrestris.TapTer_scaffold_14939                  57220  4 +     99546 AC---AA----------
i Tapirus_terrestris.TapTer_scaffold_14939              I 2 I 2
s Tarsius_lariang.k141_609102                               26144  7 +     42269 ATTA-AA---------T
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               59460  7 +     65473 ATTA-AA---------T
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194007458  5 - 194193292 AT---AA---------C
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             38926  2 -     47444 ------A---------G
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 I 9
s Tolypeutes_matacus.TolMat_scaffold_269431                  5147  3 +      6782 AC---A-----------
i Tolypeutes_matacus.TolMat_scaffold_269431             I 2 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  135465  4 -    259118 AC---AA----------
i Tonatia_saurophila.TonSau_scaffold_3334               I 2 C 0
s Trachypithecus_auratus.k141_738098                        26561  5 +     38948 AT---AA---------C
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   20290  5 -     32910 AT---AA---------C
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      1678  5 -     12939 AT---AA---------C
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       1613  5 -     14244 AT---AA---------C
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           43011  5 -     54611 AT---AA---------C
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                         817  5 -     11566 AT---AA---------C
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     2989  5 -     15592 AT---AA---------C
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          1646  5 +     14371 AT---AA---------C
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  51398  5 +     51589 AT---AA---------C
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       14579  5 +     14732 AT---AA---------C
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       5050  5 -     28054 AT---AA---------C
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44659850  5 -  44834318 AT---AA---------C
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       2154  5 +     13828 AT---AA---------C
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   4763  4 +     90398 GC---AA----------
i Tragulus_javanicus.TraJav_scaffold_14717              I 2 C 0
s Trichechus_manatus.JH594618.1                          16084490  3 +  31416278 AC---A-----------
i Trichechus_manatus.JH594618.1                         I 2 C 0
s Tupaia_chinensis.KB320831.1                             2792510  5 -   3938065 AC---AA---------C
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    4715  5 +     13056 AC---AA---------C
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69313019  4 -  96451834 AC---AA----------
i Tursiops_truncatus.MRVK01000923.1                     I 2 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                    936  2 +     10241 AC---------------
i Uropsilus_gracilis.UroGra_scaffold_69449              I 2 C 0
s Ursus_maritimus.KK498671.1                              6514385  4 +  28682327 AC---AA----------
i Ursus_maritimus.KK498671.1                            I 2 C 0
s Varecia_rubra.k141_432109                                  4942  5 -     20643 AT---AA---------C
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             24483  5 -     33872 AT---AA---------C
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1524261  2 -   2331223 AC---------------
i Vicugna_pacos.KN269600.1                              I 2 I 2
s Vulpes_lagopus.VulLag_flattened_line_2045                137895  4 -    281493 AC---AA----------
i Vulpes_lagopus.VulLag_flattened_line_2045             I 2 C 0
s Xerus_inauris.XerIna_scaffold_7898                       126518  2 -    134049 ------A---------C
i Xerus_inauris.XerIna_scaffold_7898                    C 0 I 8
s Zalophus_californianus.ZalCal_flattened_line_4097        213863  4 -    227762 AC---AA----------
i Zalophus_californianus.ZalCal_flattened_line_4097     I 2 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     14605 11 -     20485 ------AGTACTTGTTC
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           6511  4 -      8775 AC---AA----------
i Ziphius_cavirostris.ZipCav_flattened_line_127025      I 2 C 0
e Sorex_araneus.JH798170.1                               17750754 3364 -  27805282 I
e Microgale_talazaci.MicTal_scaffold_34660                  33938  0 -     48017 C
e Manis_pentadactyla.KN017078.1                             35313  0 +     58827 C
e Manis_javanica.JSZB01003966.1                            145236  0 +    252755 C
e Elephantulus_edwardii.JH947210.1                        7804622 10712 +  15467074 I
e Echinops_telfairi.JH980316.1                           22997949  0 -  44670279 C
e Hylobates_pileatus_a.tarseq_592                             33391 319 -     60944 I
e Propithecus_coquerelli.NW_012147997.1                    667273 6500 -   2312742 I
e Hystrix_cristata.HysCri_scaffold_50788                     5776  0 +     22540 C
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               11471 17 +    209709 A---A-----AT-------G-TTC----ATTA----T-TT-CT
s Acinonyx_jubatus.LLWD01000356.1                         2033588 21 +   3721120 ----------AT---CTTTG-TTG----GGTAGCAAA-TT---
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    112234  4 -    189883 --------------------------------------TT-TT
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 4 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10656900 17 +  23371972 ----------AT---CTTTG-TTA----ATTA----T-TT---
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7094244 17 -  16596857 ----------AT---CTTTG-TTA----ATTA----T-TT---
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   16534  9 -     22067 -------------------A-T--------TA----C-CT-TT
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                    955 21 -     60446 A---A-----AT-------G-TTC----ATTAATTAT-TT-CT
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         1678 21 -     29318 A---A-----AT-------G-TTC----ATTAATTAT-TT-CT
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                          613 21 +     38766 A---A-----AT-------G-TTC----ATTAATTAT-TT-CT
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          1572 21 -     80423 A---A-----AT-------G-TTC----ATTAATTAT-TT-CT
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             9870 21 -     18050 A---A-----AT-------G-TTCATTAATTA----T-TT-CT
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                 10963 21 -     11521 A---A-----AT-------G-TTCATTAATTA----T-TT-CT
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                             10547 21 -     21359 A---A-----AT-------G-TTCATTAATTA----T-TT-CT
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                 162 21 +      2129 A---A-----AT-------G-TTCATTAATTA----T-TT-CT
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          9846 21 -     10438 A---A-----AT-------G-TTCATTAATTA----T-TT-CT
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            6502 21 +      7047 A---A-----AT-------G-TTCATTAATTA----T-TT-CT
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             9782 21 +     10410 A---A-----AT-------G-TTCATTAATTA----T-TT-CT
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            3590 21 -      4927 A---A-----AT-------G-TTCATTAATTA----T-TT-CT
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3519719 20 +   4113121 ----CA-C--AT---CTTTG-TTA----GTTA----T-CC---
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      389915 20 -    631301 ----CA---TAT---CCTTG-TTA----ATTA----T-TT---
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            30302 20 +     33004 ----CA-C--AT---CTTTG-TTA----GTTA----T-TC---
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 62236 17 +     78111 A---A-----AT-------G-TTC----ATTA----T-TT-CT
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            5177 17 +     22701 A---A-----AT-------G-TTC----ATTA----T-TT-CT
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5749134 17 +   9889416 A---A-----AT-------G-TTC----atta----t-tt-ct
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             5721 17 -    104377 A---A-----AT-------G-TTC----ATTA----T-TT-CT
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               5723 17 +     23246 A---A-----AT-------G-TTC----ATTA----T-TT-CT
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     3345  1 +      5067 ------------------------------------------T
i Aplodontia_rufa.AprRuf_scaffold_156013                I 10 C 0
s Arctocebus_calabarensis.k141_587554                         665 15 +      9265 A---A-----AT-------G-TGT----ATTA----T-TT---
i Arctocebus_calabarensis.k141_587554                   C 0 I 2
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 8326 20 -     29036 ----CA---TAT---CTTTG-TTA----ATTA----T-TT---
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9538979 21 +  39197703 A---T-----AT-------G-TTCATTAATTA----T-TT-CT
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             60250 21 +     85812 A---T-----AT-------G-TTCATTAATTA----T-TT-CT
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                11262 21 +     89302 A---T-----AT-------G-TTCATTAATTA----T-TT-CT
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             15767 21 -     58268 A---T-----AT-------G-TTCATTAATTA----T-TT-CT
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             63758 21 +    119057 A---T-----AT-------G-TTCATTAATTA----T-TT-CT
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               5727 21 -     25888 A---T-----AT-------G-TTCATTAATTA----T-TT-CT
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 6385 14 -     16375 A---A-----AT-------G-T-------TTA----T-TT-CC
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                                  5 14 +      6337 A---A-----AT-------G-T-------TTA----T-TT-CT
i Avahi_peyrierasi.k141_798820                          N 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26379743 20 +  51448160 ----CA-C--AT---CTTTG-TTA----GTTA----T-TT---
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        4974 20 -     13118 ----CA-C--AT---CTTTG-TTA----GTTA----T-TT---
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   42782 20 -     72089 ----TA-C--GT---CTTTG-TTA----GTTA----T-TC---
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6559456 20 +   6870073 ----CA-C--AT---CTTTG-TTA----CTTA----C-TC---
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138139560 20 - 161108492 ----CA-C--AT---CTTTG-TTA----CTTA----C-TC---
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     572097 20 -    998990 ----CA-C--AT---CTTTG-TTA----CTTA----C-TC---
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136295293 20 - 158972876 ----CA-C--AT---CTTTG-TTA----CTTA----C-TC---
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1232376 20 -   1914593 ----CA-C--AT---CTTTG-TTA----CTTA----T-TC---
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               113620 11 -    171031 A---A-----AT-------G-TTC----ATT------------
i Cacajao_ayresi.k141_724503                            C 0 I 2
s Cacajao_calvus.k141_96166                                 12651 11 +    125063 A---A-----AT-------G-TTC----ATT------------
i Cacajao_calvus.k141_96166                             C 0 I 2
s Cacajao_hosomi.k141_303789                                14696 11 -    216513 A---A-----AT-------G-TTC----ATT------------
i Cacajao_hosomi.k141_303789                            C 0 I 2
s Cacajao_melanocephalus.k141_1160263                        7236 11 -    134917 A---A-----AT-------G-TTC----ATT------------
i Cacajao_melanocephalus.k141_1160263                   C 0 I 2
s Camelus_bactrianus.KN276303.1                           3219161 17 -   8989139 ----------AT---CTTTG-TCA----GTTA----T-TT---
i Camelus_bactrianus.KN276303.1                         I 2 I 2
s Camelus_dromedarius.KN271192.1                           396863 17 -  15254737 ----------AT---CTTTG-TCA----GTTA----T-TT---
i Camelus_dromedarius.KN271192.1                        I 2 I 2
s Camelus_ferus.KB016973.1                                2972598 17 +   6889770 ----------AT---CTTTG-TCA----GTTA----T-TT---
i Camelus_ferus.KB016973.1                              I 2 I 2
s CanFam4.chr31                                          11519059 17 +  39901454 ----------AT---CGTTG-TTA----ATTA----T-TT---
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   14084 17 +     87036 ----------AT---CGTTG-TTA----ATTA----T-TT---
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11265726 17 -  35597290 ----------AT---CGTTG-TTA----ATTA----T-TT---
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11088260 17 +  39895921 ----------AT---CGTTG-TTA----ATTA----T-TT---
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16455275 17 -  44759192 ----------AT---CGTTG-TTA----ATTA----T-TT---
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21324795 20 + 157394656 ----CA-C--AT---CTTTG-TTA----GTTA----T-AC---
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135706022 20 - 157403528 ----CA-C--AT---CTTTG-TTA----GTTA----T-AC---
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          308669 17 +    345090 a---t-----tt-------g-ata----atta----t-tt-CC
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               59116 20 +     67245 ----CA---TAT---CTTTG-ATA----ATTA----T-TT---
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   30339  8 +     33760 ---------------------C--------TA----T-TT-CC
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   158477  9 -    276539 ----------------------TA----GTTA----T-CT---
i Catagonus_wagneri.CatWag_scaffold_1305                I 7 C 0
s Cavia_aperea.AVPZ01000278.1                            15786220  9 -  24422027 -------------------N-N--------NN----N-NN-NN
i Cavia_aperea.AVPZ01000278.1                           I 10 C 0
s Cavia_porcellus.DS562889.1                             15798155  9 -  24440124 -------------------a-t--------ta----t-tc-cg
i Cavia_porcellus.DS562889.1                            I 10 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       176346  9 +    436027 -------------------A-T--------TA----T-TC-CG
i Cavia_tschudii.CavTsc_scaffold_488                    I 10 C 0
s Cebus_albifrons.Contig22                               18890465 21 -  29618158 A---A-----AT-------G-TTCATTAATTA----T-TT-CT
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 8009 21 -     26817 A---A-----AT-------G-TTCATTAATTA----T-TT-CT
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                12249 21 +     25043 A---A-----AT-------G-TTCATTAATTA----T-TT-CT
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         7703 17 +     21754 A---T-----TT-------G-ATA----ATTA----T-TT-CC
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4363475 18 +   7569818 ----A-----AT---CTTTC-TTA----ACTA----T-TT---
i Ceratotherium_simum.JH767818.1                        I 2 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         3232 18 -      9338 ----A-----AT---CTTTC-TTA----ACTA----T-TT---
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    I 2 C 0
s Cercocebus_atys.KQ010443.1                              6554900 21 +   6739814 A---A-----AT-------G-TTC----ATTAATTAT-TT-CT
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      26377 21 +     60454 A---A-----AT-------G-TTC----ATTAATTAT-TT-CT
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          1582 21 -     21101 A---A-----AT-------G-TTC----ATTAATTAT-TT-CT
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         58892 21 -    107033 A---A-----AT-------G-TTC----ATTAATTAT-TT-CT
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        1784 21 -     17608 A---A-----AT-------G-TTC----ATTAATTAT-TT-CT
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          29279 21 +     30494 A---A-----AT-------G-TTC----ATTAATTAT-TT-CT
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          58125 21 -     59240 A---A-----AT-------G-TTC----ATTAATTAT-TT-CT
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          1826 21 +     16677 A---A-----AT-------G-TTC----ATTAATTAT-TT-CT
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           23984 21 +     35983 A---A-----AT-------G-TTC----ATTAATTAT-TT-CT
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11990512 21 +  12117833 A---A-----AT-------G-TTC----ATTAATTAT-TT-CT
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46477270 21 +  46592721 A---A-----AT-------G-TTC----ATTAATTAT-TT-CT
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      40821 21 -     45581 A---A-----AT-------G-TTC----ATTAATTAT-TT-CT
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       1827 21 +     35577 A---A-----AT-------G-TTC----ATTAATTAT-TT-CT
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        1603 21 -     25661 A---A-----AT-------G-TTC----ATTAATTAT-TT-CT
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        1581 21 -     17744 A---A-----AT-------G-TTC----ATTAATTAT-TT-CT
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        21197 21 +     37128 A---A-----AT-------G-TTC----ATTAATTAT-TT-CT
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           2402 19 -      6963 ----A-----AC---ATATG-TTA----ATCA----T-TT--C
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 I 1
s Cheirogaleus_major.k141_1157592                           58671 14 -     68416 A---A-----AT-------G-T-------TTA----T-TT-CT
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            7715 14 +     13308 A---A-----AT-------G-T-------TTA----T-TT-CT
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             5266 21 -     18223 A---A-----AT-------G-TTC----GTTAATTAT-TT-CT
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             22289 21 +     25473 A---A-----AT-------G-TTC----ATTAATTAT-TT-CT
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           41324 21 +     57117 A---A-----AT-------G-TTC----GTTAATTAT-TT-CT
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          46003 21 +     54541 A---A-----AT-------G-TTC----GTTAATTAT-TT-CT
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15961384  9 +  43084221 -------------------a-t--------ta----t-tc-ac
i Chinchilla_lanigera.JH721867.1                        I 12 C 0
s Chiropotes_israelita.k141_1189915                         70827 11 +    196370 A---A-----AT-------G-TTC----ATT------------
i Chiropotes_israelita.k141_1189915                     C 0 I 2
s Chiropotes_sagulatus.k141_773804                          15007 11 +     40510 A---A-----AT-------G-TTC----ATT------------
i Chiropotes_sagulatus.k141_773804                      C 0 I 2
s Chlorocebus_aethiops.ctg22                             15138743 21 -  15256731 A---A-----AT-------G-TTC----GTTAATTAT-TT-CT
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      33790 21 -     53260 A---A-----AT-------G-TTC----GTTAATTAT-TT-CT
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101144354 21 + 101219884 A---A-----AT-------G-TTC----ATTAATTAT-TT-CT
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                16087 19 -     21363 ----A-----AC---ATATG-CTA----ATTA----T-TT--C
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 I 1
s Choloepus_hoffmanni.KN194586.1                           761394 19 +    964067 ----A-----AC---ATATG-CTA----ATTA----T-TT--C
i Choloepus_hoffmanni.KN194586.1                        C 0 I 1
s Colobus_angolensis.KN985967.1                          10886120 21 +  10971483 A---A-----AT-------G-TTC----ATTAATTAT-TT-CT
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147664284 21 + 156195979 A---A-----AT-------G-TTC----ATTAATTAT-TT-CT
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            16269 21 +     23629 A---A-----AT-------G-TTC----ATTAATTAT-TT-CT
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60613215 19 +  78930452 A---C-----AT---CTTTG-TAA----ATTA----T-CT---
i Condylura_cristata.JH655880.1                         C 0 I 2
s Cricetomys_gambianus.CriGam_scaffold_949                 278187  5 -    399297 --------------------------------------TTTTT
i Cricetomys_gambianus.CriGam_scaffold_949              I 4 C 0
s Cricetulus_griseus.LT883672.1                          53028870  4 +  72327488 --------------------------------------TT-TT
i Cricetulus_griseus.LT883672.1                         I 4 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         39301 16 -     40477 ----TA-C--AT---CTTTG-TTC----ATT------------
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 I 2
s Crocidura_indochinensis.CroInd_scaffold_88140              1595 10 +     11655 -------------------G-CTA-----TTA----T-TA---
i Crocidura_indochinensis.CroInd_scaffold_88140         I 4 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            51605 17 -     70449 ----------AT---CTTTG-TTA----GTTA----T-TT---
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  207785  9 -    956709 -------------------A-T--------TA----C-GT-TC
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 30368  9 -     67205 -------------------A-T--------TA----T-GC-CC
i Ctenomys_sociabilis.CteSoc_scaffold_19489             I 8 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                17404  9 +     26546 -------------------A-T--------TG----T-TC-CC
i Cuniculus_paca.CunPac_flattened_line_16637            I 12 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             58489  9 -    236241 -------------------A-A--------TG----G-TT-CC
i Dasyprocta_punctata.DasPun_flattened_line_634         I 12 C 0
s Dasypus_novemcinctus.JH568778.1                          183276 17 -   6883506 ----A-----AC-----ATG-TTA----ATCA----T-TT--C
i Dasypus_novemcinctus.JH568778.1                       C 0 I 1
s Daubentonia_madagascariensis.ctg11                     16844530 14 +  31942871 A---A-----AT-------G-T-------TTA----T-TT-CC
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80036421 20 -  96802777 ----TA-C--AT---CTTTG-TTA----GTTA----T-TT---
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18698391 20 -  18957592 ----CA---TAT---CTTTG-TTA----ATTA----T-TT---
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 322124 18 +    993696 ----A-----atcttt---c-tta----atta----t-tt---
i Dicerorhinus_sumatrensis.PEKH010003161.1              I 2 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   2777 18 +    151128 ----A-----AT---CTTTC-TTA----ACTA----T-TT---
i Diceros_bicornis.DicBicMic_scaffold_9545              I 2 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   156641  9 +    228994 -------------------A-T--------TA----T-TC-AC
i Dinomys_branickii.DinBra_scaffold_1996                I 12 C 0
s Dipodomys_ordii.KN672545.1                              3655973  9 +   4240102 -------------------a-t--------ta----t-tt-ct
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 27606  9 +     28912 -------------------A-T--------TA----T-TT-CT
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                35740  9 -     73477 -------------------A-T--------TT----T-TC-CT
i Dolichotis_patagonum.DolPat_scaffold_14102            I 12 C 0
s Echinops_telfairi.JH980316.1                           22997949 12 -  44670279 -------------------t-tta----attc----t-tt--c
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 11824 20 +     24177 ----CA-C--accttt---g-tta----atta----t-tt---
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1491071 20 +   1727528 ----CA-C--AT---CTTTG-TGA----GTTA----T-TC---
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7815334 12 +  15467074 -------------------G-TTA----ATGA----A-TT--T
i Elephantulus_edwardii.JH947210.1                      I 10712 C 0
s Ellobius_lutescens.LOEQ01003611.1                        239417  4 -    369425 --------------------------------------tt-tt
i Ellobius_lutescens.LOEQ01003611.1                     I 4 C 0
s Ellobius_talpinus.LOJH01090055.1                           6530  4 -      7838 --------------------------------------tt-tt
i Ellobius_talpinus.LOJH01090055.1                      I 4 C 0
s Enhydra_lutris.KZ291749.1                              85871763 17 +  99434291 ----------Atcttt---g-tta----atta----t-tt---
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4703770 20 +   6522550 ----CA---catctttt--t-ta-----atta----t-tt---
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5852578 18 -   7175178 ----A-----atgttt---c-tta----atta----t-tt---
i Equus_asinus.JREZ01000062.1                           I 2 C 0
s Equus_caballus.CM000402.2                              13351081 18 +  41866177 ----A-----atgttt---c-tta----atta----t-tt---
i Equus_caballus.CM000402.2                             I 2 C 0
s Equus_przewalskii.ATBW01073585.1                          12571 18 +     92910 ----A-----atgttt---c-tta----atta----t-tt---
i Equus_przewalskii.ATBW01073585.1                      I 2 C 0
s Erinaceus_europaeus.JH835290.1                         11534147 10 +  16010500 -------------------g-tta-----atg----t-ct---
i Erinaceus_europaeus.JH835290.1                        I 4 C 0
s Erythrocebus_patas.Contig8                             48770921 21 -  48907691 A---A-----AT-------G-TTC----ATTAATTAT-TT-CT
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          314627 20 +    330699 ----CA-C--AT---CTTTG-TTA----GTTA----T-TT---
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             61081 20 +     89355 ----CA-C--AT---CTTTG-CTA----GTTA----T-TT---
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              4723 14 +     13586 A---A-----AT-------G-T-------TTA----T-TT-CC
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               4659 14 -      6809 A---A-----AT-------G-T-------TTA----T-TT-CC
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            11132 14 +     36558 A---A-----AT-------G-T-------TTA----T-TT-CC
i Eulemur_coronatus.k141_3240342                        C 0 I 7
s Eulemur_flavifrons.k141_903901                             7452 14 +     60246 A---A-----AT-------G-T-------TTA----T-TT-CC
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                10930 14 +    109717 A---A-----AT-------G-T-------TTA----T-TT-CC
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               15314 14 +     16540 A---A-----AT-------G-T-------TTA----T-TT-CC
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                15588 14 +     27497 A---A-----AT-------G-T-------TTA----T-TT-CC
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           18044 14 +     26808 A---A-----AT-------G-T-------TTA----T-TT-CC
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                32780 14 +     46535 A---A-----AT-------G-T-------TTA----T-TT-CC
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              15502 14 -     29447 A---A-----AT-------G-T-------TTA----T-TT-CC
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129892559  9 - 159252932 ------------------------------TAGCAAA-TT---
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129279634 21 - 158578461 ----------AT---CTTTG-TTG----GGTAGCAAA-TT---
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 20779 21 +     52776 ----------AT---CTTTG-TTG----GGTAGCAAA-TT---
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Galago_moholi.ctg555                                     210553 17 -    847004 A---C-----AT-------G-TTT----ATTA----T-AT-CC
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           12932 17 -     43889 A---C-----AT-------G-TTT----ATTA----T-AT-CC
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          10007 17 +     27357 A---C-----AT-------G-TTT----ATTA----T-AT-CC
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               155892 21 +    324696 A---A-----AT---CTTTG-TTA----ATTG----T-TT-CC
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    180868 20 -    189561 ----CA-C--AT---CTTTG-TTA----GTTA----T-TC---
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           12714 10 -     18683 -------------------CAT--------TA----C-TT-TT
i Glis_glis.GliGli_scaffold_79770                       I 8 C 0
s Gorilla_beringei.k141_111300                               4987 21 -     14630 A---A-----AT-------G-TTCATTAATTA----T-TT-CT
i Gorilla_beringei.k141_111300                          C 0 I 3
s Gorilla_gorilla.LT578340.1                            119652086 21 - 195582420 A---A-----AT-------G-TTCATTAATTA----T-TT-CT
i Gorilla_gorilla.LT578340.1                            C 0 I 3
s Graphiurus_murinus.GraMur_scaffold_4493                   77259 10 +    118900 -------------------CAT--------TA----C-TT-CC
i Graphiurus_murinus.GraMur_scaffold_4493               I 8 C 0
s Hapalemur_alaotrensis.k141_1280836                         1502 14 +     10286 A---A-----AT-------G-T-------TTA----T-TT-CC
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_1254239                            9678 12 +      9690 A---A-----AT-------G-T-------TTA----T-TT---
i Hapalemur_gilberti.k141_1254239                       C 0 N 0
s Hapalemur_griseus.k141_1387522                             5308 14 +     56096 A---A-----AT-------G-T-------TTA----T-TT-CC
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        28558 14 -     42470 A---A-----AT-------G-T-------TTA----T-TT-CC
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        45181 14 -     54384 A---A-----AT-------G-T-------TTA----T-TT-CC
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              16810 17 +     53719 ----------AT---CTTTG-TTA----GTTA----T-TT---
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                27067 20 -     91191 ----CA-C--AT---CTTTG-TTA----GTTA----T-CC---
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2550720  9 +  31725842 -------------------a-t--------ta----t-tc-CC
i Heterocephalus_glaber.JH602058.1                      I 12 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               60137 19 +     73687 ----A-----AT---CTTTG-TTA----ATTG----T-CT--T
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              146715 20 +    277961 ----CA-C--AT---CTTTG-TTA----GTTA----T-TT---
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      277992 20 -    477199 ----CA-C--AT---CTTTG-TTA----ATTA----T-TT---
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              7139 20 -      9143 ----CA-C--AT---CTTTG-TTC----ATTA----T-TT---
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      4393 17 -   7690867 A---A-----AT-------G-TTC----ATTA----T-TT-CT
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 16882 17 -     67322 ----------GT---CTTTC-TTA----GTTA----T-TT---
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           18601  9 -    119109 -------------------A-T--------TA----T-TA-CC
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       I 12 C 0
s Hylobates_abbotti.k141_493872                              4819 17 +      5897 A---A-----AT-------G-TTC----ATTA----T-TT-CT
i Hylobates_abbotti.k141_493872                         C 0 I 1
s Hylobates_agilis.k141_624065                               1683 17 +      2112 A---A-----AG-------G-TTC----ATTA----T-TT-CT
i Hylobates_agilis.k141_624065                          C 0 C 0
s Hylobates_klossii.k141_466549                             11259 17 +     11537 A---A-----AT-------G-TTC----ATTA----T-TT-CT
i Hylobates_klossii.k141_466549                         C 0 I 1
s Hylobates_pileatus_b.ContigUN                                 14624364 17 -  25970782 A---A-----AT-------G-TTC----ATTA----T-TT-CT
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            1620 17 -      2977 A---A-----AT-------G-TTC----ATTA----T-TT-CT
i Hylobates_muelleri.k141_1389047                       C 0 I 1
s Hystrix_cristata.HysCri_scaffold_50788                     5776  9 +     22540 -------------------A-T--------TA----T-TT-CC
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7125492 10 +  13083262 -------------------ctt--------ta----t-tt-cc
i Ictidomys_tridecemlineatus.JH393315.1                 I 8 C 0
s Indri_indri.k141_4418183                                   1151 14 -      1457 A---A-----AT-------G-T-------TTA----T-TT-CC
i Indri_indri.k141_4418183                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               8628 11 +     17520 -------------------G-TTA----GTTA----G-TT---
i Inia_geoffrensis.IniGeo_flattened_line_66725          I 7 C 0
s Jaculus_jaculus.JH725517.1                              8565544  9 +  11848649 -------------------A-T--------TA----C-CT-TT
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               23237 20 +     37189 ----CA-C--AA---CTTTG-TTA----GTTA----T-TT---
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          49847 21 -    147782 A---A-----AT-------G-TTCATTAATTA----T-TT-CT
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   113861 20 -    115756 ----CA-C--AT--CTTTTT-TA-----ATTA----T-TT---
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258406863 14 - 285822530 A---A-----AT-------G-T-------TTA----T-TT-CC
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        23616 12 +     39228 ----------AT-------G-T-------TTA----T-TT-CC
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            53000 12 +     63517 ----------AT-------G-T-------TTA----T-TT-CC
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        78259 12 +    116806 ----------AT-------G-T-------TTA----T-TT-CC
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     31255 12 -     33031 ----------AT-------G-T-------TTA----T-TT-CC
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3085571 17 -   3498232 ----------AT---CTTTG-TTA----ATTA----C-TT---
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    12889 17 +     22452 A---A-----AT---CATTA-T--------TT----T-TT-CC
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            135574 20 +   3060487 ----CA-C--AT---CTTTG-TTA----GTTA----T-TT---
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19247986 21 +  19376315 A---A-----AT-------G-TTC----ATTAATTAT-TT-CT
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           10313 17 +     84689 A---A-----AT-------G-TTT----ATTA----T-TT-CT
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3778062 17 +   6799190 A---A-----AT-------G-TTT----ATTA----T-TT-CT
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20593836 19 -  62548349 ----A-----AC---CTTTG-TTA----ATTA----T-TT--T
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11087716 17 +  39895028 ----------AT---TGTTG-TTA----ATTA----T-TT---
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             19729 21 +     74745 A---A-----AT-------G-TTC----GTTAATTAT-TT-CT
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12706185 21 +  12821369 A---A-----AT-------G-TTC----GTTAATTAT-TT-CT
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                1830 21 -      3136 A---A-----AT-------G-TTC----GTTAATTAT-TT-CT
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           46647 21 +     63263 A---A-----AT-------G-TTC----GTTAATTAT-TT-CT
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                 1350 21 -      2568 A---A-----AT-------G-TTC----GTTAATTAT-TT-CT
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 1936 21 -      7381 A---A-----AT-------G-TTC----GTTAATTAT-TT-CT
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  45154 21 -     79256 A---A-----AT-------G-TTC----GTTAATTAT-TT-CT
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196035262 21 + 196197964 A---A-----AT-------G-TTC----GTTAATTAT-TT-CT
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11445430 21 +  11645122 A---A-----AT-------G-TTC----GTTAATTAT-TT-CT
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   4101 21 -     46448 A---A-----AT-------G-TTC----GTTAATTAT-TT-CT
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                1773 21 -     13212 A---A-----AT-------G-TTC----GTTAATTAT-TT-CT
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 15454 21 -     55006 A---A-----AT-------G-TTC----ATTAATTAT-TT-CT
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43840571 21 +  43892939 A---A-----AT-------G-TTC----GTTAATTAT-TT-CT
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               16740 21 -     24607 A---A-----AT-------G-TTC----GTTAATTAT-TT-CT
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               4106 21 -     27140 A---A-----AT-------G-TTC----GTTAATTAT-TT-CT
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                701197 20 +    802869 ----CA-C--AC---TTTTG-TTA----ATTA----T-TT---
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43437148 21 -  43563597 A---A-----AT-------G-TTC----GTTAATTAT-TT-CT
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4449974 21 -   4543643 A---A-----AT-------G-TTC----GTTAATTAT-TT-CT
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            145236 11 +    252755 -------------------G-TTA----ATTA----T-TT---
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             35313 11 +     58827 -------------------G-TTA----ATTA----T-TT---
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36873333 10 +  64221397 -------------------ctt--------ta----t-tt-ct
i Marmota_marmota.CZRN01000005.1                        I 7 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       64013 20 -    234502 ----CA-C--AT---CTTTG-TTC----ATTA----T-TT---
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433              576 17 -     87323 ----------AT---CTTTG-TTA----ATTA----T-TT---
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               12381  4 +     15977 --------------------------------------TT-TT
i Meriones_unguiculatus.MerUng_scaffold_52233           I 4 C 0
s Mesocricetus_auratus.KB708139.1                         1046579  4 -  26018355 --------------------------------------tt-tt
i Mesocricetus_auratus.KB708139.1                       I 4 C 0
s Microcebus_murinus.CM007691.1                          16509886 14 +  47401472 a---a-----at-------g-t-------tta----t-tt-cc
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  33938 12 -     48017 -------------------T-TTA----ATGA----T-TT--C
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               22298 20 -     32043 ----CA---TAT---CTTTG-TTA----ATTA----T-TT---
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22819716  4 -  98408828 --------------------------------------tt-tt
i Microtus_ochrogaster.CM001673.1                       I 4 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8209296 19 +  10048721 ----CA-C--AC---CTTTT-TA-----ATTA----T-TT---
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            33950 19 +     45743 ----CA-C--AC---CTTTT-TA-----ATTA----T-TT---
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         1701 21 +     29742 A---A-----AT-------G-TTC----ATTAATTAT-TT-CT
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        11084 17 -    104932 ----------AT---CTTTG-TTA----ATTA----C-TT---
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     5272 14 +      8497 A---A-----AT-------G-T-------TTA----T-TT-CC
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 146009 20 +    154973 ----CA-C--AT---CTTTT-TTA----GTTA----T-TT---
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                160820 23 +    265003 ----CAACACAT---CTTTG-TCA----ATTA----T-TT---
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                   613 20 -     19904 ----CA-C--AT---CTTTG-TTA----GTTA----T-TC---
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  144506 17 -    168139 ----------AT---CTTTG-TTA----GTTA----T-TT---
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          19153 20 -    100666 ----CA-C--AT--GTTTTT-AA-----ATTA----T-TT---
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70766219  5 +  92629107 --------------------------------------ttttt
i Mus_caroli.LT608236.1                                 I 4 C 0
s Mus_musculus.chr16                                     75489278  5 +  98207768 --------------------------------------ttttt
i Mus_musculus.chr16                                    I 4 C 0
s Mus_pahari.LT608305.1                                  67555506  5 +  89017189 --------------------------------------ttttt
i Mus_pahari.LT608305.1                                 I 4 C 0
s Mus_spretus.CM004110.1                                 74330456  5 +  97876770 --------------------------------------ttttt
i Mus_spretus.CM004110.1                                I 4 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             11497 10 +     98495 -------------------CAT--------TA----C-TT-CT
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 8 C 0
s Mustela_putorius.JH417978.1                             4423943 17 -  28371801 ----------Atcttt---g-tta----atta----t-tt---
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     89648  9 -    117718 -------------------C-C--------TA----T-GC-CC
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 12 C 0
s Myotis_brandtii.KE161952.1                               967451 20 +   8389877 ----c---acatctttt--t-aa-----ttta----t-tt---
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5019126 22 +   6462685 ----c---acatcttttttt-aa-----ttta----t-tt---
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3465032 20 -   3747815 ----c---acatctttt--t-aa-----ttta----t-tt---
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        10246 20 +     66751 ----CA-C--AT--CTTTTT-AA-----TTTA----T-TT---
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             4657 16 -      8794 ----A-----AC-----ATG-TTA-----TTA----T-TT--C
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 I 1
s Nannospalax_galili.KL201303.1                            118067 10 +    362372 -------------------a-G--------TA----ACTA-TT
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               8202 21 +     48152 A---A-----AT-------G-TTC----ATTAATTAT-TT-CT
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4484476 17 -  14209539 ----------AT---CTTTG-TTA----ATTA----C-TT---
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3950624 20 -   4490290 ----CA-C--AT---CTTTG-TTA----GTTA----T-TT---
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  48913 20 +     94413 ----CA-C--AT---TTTTG-TTA----ATTA----T-TT---
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1439838                           2561 21 +      3718 A---A-----AT-------G-TTC----ATTAATTAT-TT-CT
i Nomascus_annamensis.k141_1439838                      I 104 I 43
s Nomascus_concolor.k141_226614                               921 17 -      5092 A---A-----AT-------G-TTC----ATTA----T-TT-CT
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_642452                            1704 17 +      2851 A---A-----AT-------G-TTC----ATTA----T-TT-CT
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             24639 17 -  18771707 A---A-----AT-------G-TTC----ATTA----T-TT-CT
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  2342 17 +      4512 A---A-----AT-------G-TTC----ATTA----T-TT-CT
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                30521 17 +   3668941 ----------AT---CGTTG-TTA----ATTA----T-TT---
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65566748 17 -  95554990 A---A-----AT-------G-TTT----ATTA----T-TT-CT
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            3477 17 +      6470 A---A-----AT-------G-TTT----ATTA----T-TT-CT
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65669085 16 +  89412551 ----A-----AT-------G-TTT----ATTA----T-TT-AT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4995655 14 -  23139505 A---A-----AT---CATTA-T--------TT----C-A----
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3685202  9 +  10294119 -------------------A-T--------TA----T-GC-CC
i Octodon_degus.JH651621.1                              I 12 C 0
s Odobenus_rosmarus.KB229369.1                             679141 17 -   3126709 ----------AT---CTTTG-TTA----ATTA----C-TT---
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1079302 20 +   1425656 ----CA-C--AT---CTTTG-TGA----GTTA----T-TC---
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         36596 20 +     78940 ----CA-C--AT---CTTCG-TTA----GTTA----T-TC---
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  124969  4 +    145789 --------------------------------------TT-TT
i Ondatra_zibethicus.OndZib_scaffold_6821               I 4 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  36770  4 +     62360 --------------------------------------TT-TT
i Onychomys_torridus.OnyTor_scaffold_12578              I 4 C 0
s Orcinus_orca.KB316965.1                                 7224306 20 -   7562323 ----CA-C--AT---CTTTG-TTA----GTTA----T-TT---
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              57143 20 -     66828 a---a-----atcttt---g-ttA----ATTA----T-TT--T
i Orycteropus_afer.OryAfe_flattened_line_13509          I 6 C 0
s Oryctolagus_cuniculus.CM000803.1                      141875927 17 + 163896628 a---a-----at-tatt--a-t--------tt----t-tt-cc
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      307806 17 -    505867 ----------AT---CGTTG-TTA----ATTA----T-TT---
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                         373 17 -     53940 A---C-----AT-------G-TTT----ATTA----T-AT-CC
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18008346 17 -  38779656 a---c-----at-------g-ttt----atta----t-at-CC
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134076861 20 - 275406953 ----CA-C--AT---CTTTG-TTA----GTTA----T-CC---
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      78075 20 +    140051 ----CA-C--AT---CTTTG-TTA----GTTA----T-CC---
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127574347 21 - 205426864 A---A-----AT-------G-TTCATTAATTA----T-TT-CT
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120151500 21 - 196562556 A---A-----AT-------G-TTCATTAATTA----T-TT-CT
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  33932 21 +    295523 ----------AT---CTTTG-TTG----GGTAGCAAA-TT---
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3637668 21 +  18214204 ----------AT---CTTTG-TTG----GGTAGCAAA-TT---
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5027341 21 -   6340057 ----------AT---CTTTG-TTG----GGTAGCAAA-TT---
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1065721 20 -   1292953 ----CA-C--AT---CTTTG-TTA----GTTA----T-CC---
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188155936 21 - 188283584 A---A-----AT-------G-TTC----ATTAATTAT-TT-CT
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             4252 21 +      5367 A---A-----AT-------G-TTC----ATTAATTAT-TT-CT
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47513323 21 +  47705337 A---A-----AT-------G-TTC----ATTAATTAT-TT-CT
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 67300 21 -    104429 A---A-----AT-------G-TTC----ATTAATTAT-TT-CT
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    5833 21 +     14967 A---A-----AT-------G-TTC----ATTAATTAT-TT-CT
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 1693 21 -      7628 A---A-----AT-------G-TTC----ATTAATTAT-TT-CT
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    115383 17 -    135482 ----------AT---GTTTG-TTA----GTTA----T-TT---
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           5061 17 -     23713 A---A-----AT-------G-TGT----ATTA----T-TT-CC
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            24370 17 -     27972 A---A-----AT-------G-TGT----ATGA----T-TT-CC
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      44223  8 -     45160 ---------------------T--------TA----T-TT-CT
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4950007  4 -   8017169 --------------------------------------TT-TT
i Peromyscus_maniculatus.KI615518.1                     I 4 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    12112  6 -     36578 -------------------------------A----T-AT-CC
i Petromus_typicus.PetTyp_scaffold_33007                I 8 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            120913 20 -    122454 ----CA-C--AT---CTTTG-TTA----GTTA----T-TT---
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1987485                           1721 21 -      5908 A---A-----AT-------G-TTC----ATTAATTAT-TT-CT
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       2345 21 -     17985 A---A-----AT-------G-TTC----ATTAATTAT-TT-CT
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            1712 21 +      7694 A---A-----AT-------G-TTC----ATTAATTAT-TT-CT
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26740190 21 +  26888534 A---A-----AT-------G-TTC----ATTAATTAT-TT-CT
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            97070 20 +    112873 ----CA-C--TT--CTTTTT-TA-----ATTA----T-TT---
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             43328 11 -     61926 A---A-----AT-------G-TTC----ATT------------
i Pithecia_albicans.k141_991845                         C 0 I 2
s Pithecia_chrysocephala.k141_159118                        24759 11 +     78826 A---A-----AT-------G-TTC----ATT------------
i Pithecia_chrysocephala.k141_159118                    C 0 I 2
s Pithecia_hirsuta.k141_1152968                              8708 11 -     15800 A---A-----AT-------G-TTC----ATT------------
i Pithecia_hirsuta.k141_1152968                         C 0 I 2
s Pithecia_mittermeieri.k141_2119203                        11906 11 -     16101 A---A-----AT-------G-TTC----ATT------------
i Pithecia_mittermeieri.k141_2119203                    C 0 I 2
s Pithecia_pissinattii.k141_1102319                          5215 11 +      9673 A---A-----AT-------G-TTC----ATT------------
i Pithecia_pissinattii.k141_1102319                     C 0 I 2
s Pithecia_pithecia.tarseq_313                           13474211 11 -  19735023 A---A-----AT-------G-TTC----ATT------------
i Pithecia_pithecia.tarseq_313                          C 0 I 2
s Pithecia_vanzolinii.k141_831006                           13117 11 -     31692 A---A-----AT-------G-TTC----ATT------------
i Pithecia_vanzolinii.k141_831006                       C 0 I 2
s Platanista_gangetica.PlaMin_flattened_line_72990           4993 20 +     21690 ----CA-C--AT---CTTTG-TTA----GTTA----T-TT---
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       22550 21 +     44506 C---A-----AT-------G-TTC----ATTAATTAT-TT-CT
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        22762 21 +     67491 C---A-----AT-------G-TTT----ATTAATTAT-TT-CT
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      13001 21 -     98129 C---A-----AT-------G-TTC----ATTAATTAT-TT-CT
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     22601 21 +    147771 C---A-----AT-------G-TTC----ATTAATTAT-TT-CT
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        22856 21 -     23762 C---A-----AT-------G-TTC----ATTAATTAT-TT-CT
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          3322 21 -     55515 C---A-----AT-------G-TTC----ATTAATTAT-TT-CT
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         22675 21 +    152463 C---A-----AT-------G-TTC----ATTAATTAT-TT-CT
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                        392 21 -    119457 C---A-----AT-------G-TTC----ATTAATTAT-TT-CT
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         12397 21 +    134592 C---A-----AT-------G-TTC----ATTAATTAT-TT-CT
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          22985 21 -     75465 C---A-----AT-------G-TTC----ATTAATTAT-TT-CT
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              186873 17 -    373494 A---A-----AT-------G-TTC----ATTA----T-TT-CT
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19807521 17 +  19899266 A---A-----AT-------G-TTC----ATTA----T-TT-CT
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               5447 21 -     15069 A---A-----AT-------G-TTC----GTTAATTAT-TT-CT
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              5581 21 +     14865 A---A-----AT-------G-TTC----GTTAATTAT-TT-CT
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                1228 19 -      9567 ----A-----AT---CTTGG-TTA----ATTG----T-CT--T
i Procavia_capensis.ProCapCap_scaffold_149274           I 37 C 0
s Prolemur_simus.MPIZ01000048.1                           6848244 14 +  12164890 a---a-----at-------g-t-------tta----t-tt-cc
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coronatus.k141_1353159                         3301 14 +     11805 A---A-----CT-------G-T-------TTA----T-TT-CC
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           42645 14 +     52369 A---A-----AT-------G-T-------TTA----T-TT-CC
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         35033 14 -     44753 A---A-----AT-------G-T-------TTA----T-TT-CC
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            16955 14 +     27322 A---A-----AT-------G-T-------TTA----T-TT-CC
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       16591 14 -     53241 A---A-----AT-------G-T-------TTA----T-TT-CC
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         38854 14 -     48185 A---A-----CT-------G-T-------TTA----T-TT-CC
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           33933  4 +     77221 --------------------------------------tt-tt
i Psammomys_obesus.NESX01026517.1                       I 4 C 0
s Pteronotus_parnellii.KE867983.1                            3467 20 -     27784 ----CAA---AT---CTTTG-ATA----ATTA----C-TT---
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        246251 17 -    344369 ----------AT---CTTTG-TTA----ATTA----T-TT---
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13245576 20 -  17261082 ----CA-C--Accttt---g-tta----atta----t-tt---
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             603526 20 -   3946241 ----CA-C--Accttt---g-tta----atta----t-tt---
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131533926 21 - 161321710 ----------AT---CTTTG-TTG----GGTAGCAAA-TT---
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             29565 21 +     56732 A---A-----AT-------G-TTC----ATTAATTAT-TT-CT
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6806056 21 +   6970761 A---A-----AT-------G-TTC----ATTAATTAT-TT-CT
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             5450 21 +     18040 A---A-----AT-------G-TTC----ATTAATTAT-TT-CT
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                15379 20 +     68503 ----CA-C--AT---CTTTG-TGA----GTTA----T-TC---
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13915224  4 +  90463843 --------------------------------------tt-tt
i Rattus_norvegicus.chr11                               I 4 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1787412 20 +   2252614 ----CA---TAT---CTTTG-TTA----ATTA----T-TT---
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_1391695                           1678 21 -      1866 A---A-----AT-------G-TTC----GTTAATTAT-TT-CT
i Rhinopithecus_bieti.k119_1391695                      C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206377335 21 - 206558726 A---A-----AT-------G-TTC----ATTAATTAT-TT-CT
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44856235 21 -  45163003 A---A-----AT-------G-TTC----GTTAATTAT-TT-CT
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                18903 20 +    109198 ----CA-C--AC---CTTTG-TTA----ATTA----T-TT---
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       7541 20 +     12214 ----CA---TAT---CTTTG-TTA----GTTA----T-TC---
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15672416 21 -  43202129 A---A-----AT-------G-TTCATTAatta----t-tt-ct
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        4333 21 +     34089 A---A-----AT-------G-TTCATTAATTA----T-TT-CT
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              4274 21 -     60842 A---A-----AT-------G-TTCATTAATTA----T-TT-CT
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              4369 21 +     67014 A---A-----AT-------G-TTCATTAATTA----T-TT-CT
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              4347 21 +     60816 A---A-----AT-------G-TTCATTAATTA----T-TT-CT
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 4284 21 -     76454 A---A-----AT-------G-TTCATTAATTA----T-TT-CT
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17341009 21 -  30362882 A---A-----AT-------G-TTCATTAATTA----C-TT-CT
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         20368 21 -     62485 A---A-----AT-------G-TTCATTAATTA----C-TT-CT
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   31894 19 -    114521 A---A-----AT---CTTTA-TAA----GTTA----T-TT---
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 I 2
s Semnopithecus_entellus.k141_1572367                        3062 21 +     15331 A---A-----AT-------G-TTC----ATTAATTAT-TT-CT
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       8459 21 +     20762 A---A-----AT-------G-TTC----ATTAATTAT-TT-CT
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         118461 21 +    130994 A---A-----AT-------G-TTC----ATTAATTAT-TT-CT
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           37248 21 +     46263 A---A-----AT-------G-TTC----ATTAATTAT-TT-CT
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     30362 21 +     42640 A---A-----AT-------G-TTC----ATTAATTAT-TT-CT
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        13406 21 +     30600 A---A-----AT-------G-TTC----ATTAATTAT-TT-CT
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   99963  4 -    120886 --------------------------------------TT-TT
i Sigmodon_hispidus.SigHis_scaffold_11332               I 4 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            18476 19 +    739146 A---A-----AT---CTTTG-TTA----AATA----T-TT---
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2239410 10 +   2842873 -------------------cct--------ta----t-tt-cc
i Spermophilus_dauricus.KZ294190.1                      I 8 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             234372 17 -    276980 ----------AT---CTTTG-TTA----ATTA----T-GT---
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            27185 17 +     62062 ----------AT---CTTTG-TTA----GTTA----T-TT---
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189271458  5 + 218635234 ----CA-C--AT-------------------------------
i Sus_scrofa.CM000824.4                                 C 0 I 8
s Symphalangus_syndactylus.tarseq_24                        14620 21 -  13920577 A---A-----AT-------G-TTC----ATTAATTAT-TT-TT
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               5639 19 -      6213 ----GA---TAT---CATTC-TT-----ATTA----T-TT---
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 I 19
s Tamandua_tetradactyla.TamTet_scaffold_26877               14317 17 +     45698 ----A-----AT-----ATG-TTA----ATTA----T-TT--C
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 I 1
s Tapirus_indicus.TapInd_scaffold_176                      806535 18 +   1148477 ----A-----AC---CTTTC-TTC----ATTA----T-TT---
i Tapirus_indicus.TapInd_scaffold_176                   I 2 I 3
s Tapirus_terrestris.TapTer_scaffold_14939                  57226 18 +     99546 ----A-----AC---CTTTC-TTC----GTTA----T-TT---
i Tapirus_terrestris.TapTer_scaffold_14939              I 2 I 3
s Tarsius_lariang.k141_609102                               26151 17 +     42269 A---T-----TT-------G-ATA----ATTA----T-TT-CC
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               59467 17 +     65473 A---T-----TT-------G-ATA----ATTA----T-TT-CC
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194007463 21 - 194193292 A---A-----AT-------G-TTC----ATTAATTAT-TT-CT
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             38937  9 -     47444 -------------------A-T--------TA----T-TT-CC
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         I 9 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  5150 19 +      6782 ----G-----AC---ATATG-TTA----ATCA----T-TT--C
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 I 1
s Tonatia_saurophila.TonSau_scaffold_3334                  135469 20 -    259118 ----CA---TAA---CTTTG-TTA----ATTG----T-TC---
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        26566 21 +     38948 A---A-----AT-------G-TTC----ATTAATTAT-TT-CT
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   20295 21 -     32910 A---A-----AT-------G-TTC----ATTAATTAT-TT-CT
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      1683 21 -     12939 A---A-----AT-------G-TTC----ATTAATTAT-TT-CT
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       1618 21 -     14244 A---A-----AT-------G-TTC----ATTAATTAT-TT-CT
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           43016 21 -     54611 A---A-----AT-------G-TTC----ATTAATTAT-TT-CT
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                         822 21 -     11566 A---A-----AT-------G-TTC----ATTAATTAT-TT-CT
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     2994 21 -     15592 A---A-----AT-------G-TTC----ATTAATTAT-TT-CT
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          1651 21 +     14371 A---A-----AT-------G-TTC----ATTAATTAT-TT-CT
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  51403 21 +     51589 A---A-----AT-------G-TTC----ATTAATTAT-TT-CT
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       14584 21 +     14732 A---A-----AT-------G-TTC----ATTAATTAT-TT-CT
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       5055 21 -     28054 A---A-----AT-------G-TTC----ATTAATTAT-TT-CT
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44659855 21 -  44834318 A---A-----AT-------G-TTC----ATTAATTAT-TT-CT
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       2159 21 +     13828 A---A-----AT-------G-TTC----ATTAATTAT-TT-CT
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   4767 20 +     90398 ----AA-C--AT---CTTTG-TTA----GTTA----T-TC---
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16084493 19 +  31416278 ----A-----AT---CTTTG-TTA----ATTA----T-TT--T
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2792515 21 -   3938065 A---A-----Atcttt---g-tta----atta----t-tt-tc
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    4720 24 +     13056 AAAAA-----AT---CTTTG-TTA----ATTA----T-TT-TC
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69313023 20 -  96451834 ----CA-C--AT---CTTTG-TTA----GTTA----T-TT---
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                    938 19 +     10241 A---A-----AT---ATTTA-CAA----CTTA----T-CT---
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 I 2
s Ursus_maritimus.KK498671.1                              6514389 17 +  28682327 ----------AT---CTTTG-TTA----ATTA----T-TT---
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  4947 14 -     20643 A---A-----AT-------A-T-------TTA----T-TT-CC
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             24488 14 -     33872 A---A-----AT-------A-T-------TTA----T-TT-CC
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1524265 17 -   2331223 ----------AT---CTTTG-TCA----GTTA----T-TT---
i Vicugna_pacos.KN269600.1                              I 2 I 2
s Vulpes_lagopus.VulLag_flattened_line_2045                137899 17 -    281493 ----------AT---CGTTG-TTA----ATTA----T-TT---
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       126528 10 -    134049 -------------------CTT--------TA----T-TT-CC
i Xerus_inauris.XerIna_scaffold_7898                    I 8 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        213867 17 -    227762 ----------AT---CTTTG-TTA----ATTA----T-TT---
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     14616  9 -     20485 -------------------A-T--------CA----T-CA-TT
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           6515 20 -      8775 ----CA-C--AT---CTTTG-TTA----GTTA----T-TT---
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Sorex_araneus.JH798170.1                               17750754 3364 -  27805282 I
e Hylobates_pileatus_a.tarseq_592                             33391 319 -     60944 I
e Propithecus_coquerelli.NW_012147997.1                    667273 6500 -   2312742 I
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               11488 17 +    209709 C---T-T--G-AGTA--G------------AGGA-AT-AA
s Acinonyx_jubatus.LLWD01000356.1                         2033609 17 +   3721120 C---C-T--C-GGTG--G------------AGGA-AT-AC
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    112238 17 -    189883 T---A-T--A-AGTA--G------------ATAA-AT-AC
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10656917 19 +  23371972 CC-TC-T--C-AGTG--G------------GGGA-AT-AC
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7094261 19 -  16596857 CC-TC-C--C-AGTG--T------------GGAA-AT-AT
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   16543  8 -     22067 A---C-T--G-AGTA-------------------------
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                    976 17 -     60446 C---T-T--G-AGTA--G------------AGGA-AT-AA
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         1699 17 -     29318 C---T-T--G-AGTA--G------------AGGA-AT-AC
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                          634 17 +     38766 C---T-T--G-AGTA--G------------AGGA-AT-AC
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          1593 17 -     80423 C---T-T--G-AGTA--G------------AGGA-AT-AC
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             9891 17 -     18050 ------CTTG-AGTA--T------------AAGA-AT-AC
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                 10984 17 -     11521 ------CTTG-AGTA--T------------AAGA-AT-AC
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                             10568 17 -     21359 ------CTTG-AGTA--T------------AAGA-AT-AC
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                 183 17 +      2129 ------CTTG-AGTA--T------------AAGA-AT-AC
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          9867 17 -     10438 ------CTTG-AGTA--T------------AAGA-AT-AC
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            6523 17 +      7047 ------CTTG-AGTA--T------------AAGA-AT-AC
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             9803 17 +     10410 ------CTTG-AGTA--T------------AAGA-AT-AC
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            3611 17 -      4927 ------CTTG-AGTA--T------------AAGA-AT-AC
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3519739 17 +   4113121 C---C-C--a-agtg--g------------caaa-at-aa
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      389935 19 -    631301 CCC-C-T--G-AATA--G------------TCAA-AT-AA
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            30322 17 +     33004 C---C-C--G-AGTG--G------------GAGA-AT-AA
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 I 1
s Aotus_azarae.k141_3170768                                 62253 17 +     78111 C---T-T--G-AGTA--T------------AGGA-AT-AC
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            5194 17 +     22701 C---T-T--G-AGTA--T------------AGGA-AT-AC
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5749151 17 +   9889416 c---t-t--g-agta--t------------agGA-AT-AC
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             5738 17 -    104377 C---T-T--G-AGTA--T------------AGGA-AT-AC
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               5740 17 +     23246 C---T-T--G-AGTA--T------------AGGA-AT-AC
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     3346 17 +      5067 T---T-T--G-ATTA--G------------AGGA-AT-AA
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_587554                         682 17 +      9265 T---T-G--C-AGTA--A------------AGGA-AA-AA
i Arctocebus_calabarensis.k141_587554                   I 2 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 8346 19 -     29036 CCC-C-T--G-AGTA--A------------GGAA-AT-AA
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9539000 15 +  39197703 ------C--G-AGTA--T------------AGGA-AT-AC
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             60271 17 +     85812 C---T-T--G-AGTA--T------------AGGA-AT-AC
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                11283 17 +     89302 C---T-T--G-AGTA--T------------AGGA-AT-AC
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             15788 15 -     58268 ------C--G-AGTA--T------------AGGA-AT-AC
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             63779 17 +    119057 C---T-T--G-AGTA--T------------AGGA-AT-AC
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               5748 17 -     25888 C---T-T--G-AGTA--T------------AGGA-AT-AC
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 6399 18 -     16375 C---T-T--G-AGCA--A------------AGGA-ATAAA
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                                 19 18 +      6337 C---T-T--G-AGCA--A------------AGGA-ATAAA
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26379763 17 +  51448160 C---C-C--G-ACtg--g------------gaga-at-aa
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        4994 17 -     13118 C---C-C--G-AGTG--G------------GAGA-AT-AA
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   42802 17 -     72089 C---C-T--G-AGTG--G------------CAAA-AT-AA
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6559476 17 +   6870073 C---C-C--A-AGTG--G------------GAGA-AT-AA
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138139580 17 - 161108492 C---C-C--A-AGTG--G------------GAGA-AT-AA
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     572117 17 -    998990 C---C-C--A-AGTG--G------------GAGA-AT-AA
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136295313 17 - 158972876 C---C-C--A-AGTG--G------------GAGA-AT-AA
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1232396 17 -   1914593 C---C-C--A-AGTG--G------------GAGA-AT-AA
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               113633 17 -    171031 C---T-T--G-AGTA--G------------AGGA-AT-AC
i Cacajao_ayresi.k141_724503                            I 2 C 0
s Cacajao_calvus.k141_96166                                 12664 17 +    125063 C---T-T--G-AGTA--G------------AGGA-AT-AC
i Cacajao_calvus.k141_96166                             I 2 C 0
s Cacajao_hosomi.k141_303789                                14709 17 -    216513 C---T-T--G-AGTA--G------------AGGA-AT-AC
i Cacajao_hosomi.k141_303789                            I 2 C 0
s Cacajao_melanocephalus.k141_1160263                        7249 17 -    134917 C---T-T--G-AGTA--G------------AGGA-AT-AC
i Cacajao_melanocephalus.k141_1160263                   I 2 C 0
s Camelus_bactrianus.KN276303.1                           3219180 17 -   8989139 C---C-T--G-AGTG--G------------GAGA-AC-AA
i Camelus_bactrianus.KN276303.1                         I 2 C 0
s Camelus_dromedarius.KN271192.1                           396882 17 -  15254737 C---C-T--A-AGTG--G------------GAGA-AC-AA
i Camelus_dromedarius.KN271192.1                        I 2 C 0
s Camelus_ferus.KB016973.1                                2972617 17 +   6889770 C---C-T--G-AGTG--G------------GAGA-AC-AA
i Camelus_ferus.KB016973.1                              I 2 C 0
s CanFam4.chr31                                          11519076 19 +  39901454 CCC-C-T--C-GGTG--G------------AGAA-AT-AC
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   14101 19 +     87036 CCC-C-T--C-GGTG--G------------AGAA-AT-AC
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11265743 19 -  35597290 CCC-C-T--C-GGTG--G------------AGAA-AT-AC
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11088277 19 +  39895921 CCC-C-T--C-GGTG--G------------AGAA-AT-AC
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16455292 19 -  44759192 CCC-C-T--C-GGTG--G------------AGAA-AT-AC
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21324815 17 + 157394656 C---C-C--a-agtg--g------------caaa-at-aa
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135706042 17 - 157403528 C---C-C--A-agtg--g------------caaa-at-aa
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          308686 17 +    345090 C---T-T--G-AATA--G------------AGGA-AT-AA
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               59136 19 +     67245 CCC-C-T--G-AGTA--G------------GGGA-AT-AA
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   30347 17 +     33760 A---T-T--G-AACA--G------------AAAA-AT-AA
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   158486 20 -    276539 CCCTC-G--G-AGTG--G------------GAGA-AT-AA
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15786229 17 -  24422027 N---N-N--N-NNNN--N------------NNNN-NT-AA
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15798164 17 -  24440124 A---C-T--G-ATTA--T------------AGTG-AT-AA
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       176355 17 +    436027 A---C-T--G-ATTA--T------------AGTG-AT-AA
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18890486 17 -  29618158 C---T-T--G-AGTA--T------------AGGA-AT-AC
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 8030 17 -     26817 C---T-T--G-AGTA--T------------AGGA-AT-AC
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                12270 17 +     25043 C---T-T--G-AGTA--T------------AGGA-AT-AC
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         7720 17 +     21754 C---T-T--G-AATA--G------------AGGA-AT-AA
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4363493 19 +   7569818 CCC-C-T--G-Agta--g------------gaga-at-aa
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         3250 19 -      9338 CCC-C-T--G-AGTA--G------------GAGA-AT-AA
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6554921 17 +   6739814 C---T-T--G-AGTA--G------------AGGA-AT-AC
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      26398 17 +     60454 C---T-T--G-AGTA--G------------AGGA-AT-AC
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          1603 17 -     21101 C---T-T--G-AGTA--G------------AGGA-AT-AC
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         58913 17 -    107033 C---T-T--G-AGTA--G------------AGGA-AT-AC
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        1805 17 -     17608 C---T-T--G-AGTA--G------------AGGA-AT-AA
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          29300 17 +     30494 C---T-T--G-AGTA--G------------AGGA-AT-AA
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          58146 17 -     59240 C---T-T--G-AGTA--G------------AGGA-AT-AA
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          1847 17 +     16677 C---T-T--G-AGTA--G------------AGGA-AT-AA
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           24005 17 +     35983 C---T-T--G-AGTA--G------------AGGA-AT-AA
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11990533 17 +  12117833 C---T-T--G-AGTA--G------------AGGA-AT-AA
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46477291 17 +  46592721 C---T-T--G-AGTA--G------------AGGA-AT-AA
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      40842 17 -     45581 C---T-T--G-AGTA--G------------AGGA-AT-AA
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       1848 17 +     35577 C---T-T--G-AGTA--G------------AGGA-AT-AA
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        1624 17 -     25661 C---T-T--G-AGTA--G------------AGGA-AT-AA
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        1602 17 -     17744 C---T-T--G-AGTA--G------------AGGA-AT-AA
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        21218 17 +     37128 C---T-T--G-AGTA--G------------AGGA-AT-AA
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           2422 13 -      6963 C---T-T--G-AGCG--A------------GAGA------
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      I 1 I 1
s Cheirogaleus_major.k141_1157592                           58685 18 -     68416 C---T-T--G-AGCA--G------------AGGA-ATAAA
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            7729 18 +     13308 C---T-T--G-AGCA--G------------AGGA-ATAAA
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             5287 17 -     18223 C---T-T--G-AGTA--G------------AGGA-AT-AC
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             22310 17 +     25473 C---T-T--G-AGTA--G------------AGGA-AT-AC
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           41345 17 +     57117 C---T-T--G-AGTA--G------------AGGA-AT-AC
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          46024 17 +     54541 C---T-T--G-AGTA--G------------AGGA-AT-AC
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15961393 17 +  43084221 a---a-t--g-atta--t------------agca-at-aa
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         70840 17 +    196370 C---T-T--G-AGTA--G------------AGGA-AT-AC
i Chiropotes_israelita.k141_1189915                     I 2 C 0
s Chiropotes_sagulatus.k141_773804                          15020 17 +     40510 C---T-T--G-AGTA--G------------AGGA-AT-AC
i Chiropotes_sagulatus.k141_773804                      I 2 C 0
s Chlorocebus_aethiops.ctg22                             15138764 17 -  15256731 C---T-T--G-AGTA--G------------AGGA-AT-AC
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      33811 17 -     53260 C---T-T--G-AGTA--G------------AGGA-AT-AC
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101144375 17 + 101219884 C---T-T--G-AGTA--G------------AGGA-AT-AC
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                16107 17 -     21363 C---T-T--G-AATG--T------------GAGA-AT-TA
i Choloepus_didactylus.ChoDid_scaffold_36182            I 1 C 0
s Choloepus_hoffmanni.KN194586.1                           761414 17 +    964067 C---T-T--G-AATG--T------------GAGA-AT-TA
i Choloepus_hoffmanni.KN194586.1                        I 1 C 0
s Colobus_angolensis.KN985967.1                          10886141 17 +  10971483 C---T-T--G-AGAA--G------------AGGA-AT-AC
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147664305 17 + 156195979 C---T-T--G-AGAA--G------------AGGA-AT-AC
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            16290 17 +     23629 C---T-T--G-AGTA--G------------AGGA-AT-AC
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60613236 15 +  78930452 C---C-T--G-TGTC--T------------G--A-GT-AA
i Condylura_cristata.JH655880.1                         I 2 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         39319 20 -     40477 TCCCC-A--G-AGTA--G------------AGGA-AT-AA
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     I 2 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 278192 17 -    399297 A---C-T--A-AATT--G------------ATGA-AT-AT
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53028874 17 +  72327488 A---C-T--C-TGTA--G------------ATGA-AT-AC
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_88140              1605 18 +     11655 C---CTT--G-ATTT--G------------TGGA-AT-AA
i Crocidura_indochinensis.CroInd_scaffold_88140         C 0 I 195
s Cryptoprocta_ferox.CryFer_flattened_line_19014            51622 18 -     70449 CCC-C-T--T-GGTG--G-------------GAA-AT-AC
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  207794 17 -    956709 G---A-T--G-AATA--T------------TGGG-AT-CA
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 30377 17 -     67205 A---C-T--G-ATTA--T------------AGCA-AT-AA
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                17413 17 +     26546 A---C-T--G-ATTA--T------------AGCA-GC-AA
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             58498 17 -    236241 A---C-T--G-ATTG--T------------AGTG-AA-AA
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          183294 17 -   6883506 C---T-T--G-AGtg--a------------gaga-at-aa
i Dasypus_novemcinctus.JH568778.1                       I 1 C 0
s Daubentonia_madagascariensis.ctg11                     16844544 18 +  31942871 C---T-T--G-AGCA--A------------AGGA-ATAAA
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80036441 17 -  96802777 C---C-C--G-AGTG--G------------GAGA-AT-AA
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18698411 19 -  18957592 CTC-C-A--G-Agta--g------------agga-at-aa
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 322142 19 +    993696 c-ccC-T--G-AGTA--G------------GAGA-AT-AA
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   2795 19 +    151128 CCC-C-T--G-AGTA--G------------GAGA-AT-AA
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   156650 17 +    228994 A---G-T--G-ATTA--T------------AGCA-AT-AA
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3655982 17 +   4240102 a---t-t--g-AGTA--G------------AGGA-AT-GA
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 27615 17 +     28912 A---T-T--G-AGTA--G------------AGGA-AT-GA
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                35749 17 -     73477 A---T-T--G-GTTA--T------------AGCG-AT-AA
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22997961 19 -  44670279 c---t-t--g-ATTctga------------gaat-ac-ag
i Echinops_telfairi.JH980316.1                          C 0 I 189
s Eidolon_helvum.KE772537.1                                 11844 19 +     24177 t-cct-g--C-AGTG--G------------GGGA-AT-AA
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1491091 17 +   1727528 C---C-C--G-AGTG--G------------GAGA-AT-TA
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7815346 17 +  15467074 C---A-A--G-AATA--A------------GGTA-AT-AA
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        239421 17 -    369425 a---c-t--a-TGCA--G------------ATGA-AT-AC
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           6534 17 -      7838 a---c-t--a-TGCA--G------------ATGA-AT-AC
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85871780 19 +  99434291 c-ctc-C--C-AGTG--G------------AGGA-AT-AT
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4703790 19 +   6522550 c-ccc-G--G-GGtg--g------------gaga-at-aa
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5852596 19 -   7175178 c-tcc-c--g-agta--g------------ggaa-at-aa
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13351099 19 +  41866177 c-tcc-c--g-agta--g------------ggaa-at-aa
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          12589 19 +     92910 c-tcc-c--g-agta--g------------ggaa-at-aa
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11534157  6 +  16010500 c---c-t--t-tc---------------------------
i Erinaceus_europaeus.JH835290.1                        C 0 I 4
s Erythrocebus_patas.Contig8                             48770942 17 -  48907691 C---T-T--G-AGTA--G------------AGGA-AT-AC
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          314647 17 +    330699 C---C-C--G-AGTG--G------------GAGA-AT-AA
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             61101 17 +     89355 C---C-C--G-AGTG--G------------GAGA-AT-AA
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              4737 18 +     13586 C---T-A--G-AGCA--G------------AGGA-ATAAA
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               4673 16 -      6809 C---T-T--G-AGCA--G--------------GA-ATAAA
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            11153  9 +     36558 ------------------------------AGGA-ATAAA
i Eulemur_coronatus.k141_3240342                        I 7 C 0
s Eulemur_flavifrons.k141_903901                             7466 18 +     60246 C---T-T--G-AGCA--G------------AGGA-ATAAA
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                10944 18 +    109717 C---T-A--G-AGCA--G------------AGGA-ATAAA
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               15328 18 +     16540 C---T-T--G-AGCA--G------------AGGA-ATAAA
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                15602 18 +     27497 C---T-T--G-AGCA--G------------AGGA-ATAAA
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           18058 18 +     26808 C---T-T--G-AGCA--G------------AGGG-ATAAA
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                32794 18 +     46535 C---T-A--G-AGCA--G------------AGGA-ATAAA
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              15516 18 -     29447 C---T-A--G-AGCA--G------------AGGA-ATAAA
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129892568 17 - 159252932 C---C-T--C-GGTG--G------------AGGA-AT-AC
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129279655 17 - 158578461 C---C-T--C-GGTG--G------------AGGA-AT-AC
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 20800 17 +     52776 C---C-T--C-GGTG--G------------AGGA-AT-AC
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Galago_moholi.ctg555                                     210570 17 -    847004 T---T-G--G-AGCA--A------------AGGA-AT-AA
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           12949 17 -     43889 T---T-G--G-AGCA--A------------AGGA-AT-AA
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          10024 17 +     27357 T---T-G--G-AGCA--A------------AGGA-AT-AA
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               155913 16 +    324696 A---T-T--G-AGTA--G------------TGGA-A--GA
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    180888 17 -    189561 C---C-C--G-AGTG--G------------GAGA-AT-AA
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           12724 17 -     18683 G---T-T--G-ATTA--G------------AAAA-AT-AA
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               5011  9 -     14630 -----------------G------------AGGA-AT-AC
i Gorilla_beringei.k141_111300                          I 3 C 0
s Gorilla_gorilla.LT578340.1                            119652110  9 - 195582420 -----------------G------------AGGA-AT-AC
i Gorilla_gorilla.LT578340.1                            I 3 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   77269 17 +    118900 A---T-T--G-GCTA--G------------AAAA-GT-AA
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         1516 18 +     10286 C---T-T--G-AACA--G------------AGGA-ATAAA
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                                0 11 -     11661 --------------A--G------------AGGA-ATAAA
i Hapalemur_gilberti.k141_279011                        N 0 C 0
s Hapalemur_griseus.k141_1387522                             5322 18 +     56096 C---T-T--G-AACA--G------------AGGA-ATAAA
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        28572 18 -     42470 C---T-T--G-AACA--G------------AGGA-ATAAA
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        45195 18 -     54384 C---T-T--A-AACA--G------------AGGA-ATAAA
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              16827 18 +     53719 CCC-C-A--T-GGTG--G-------------GAA-AT-AC
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                27087 17 -     91191 C---C-C--A-AGTG--G------------CAAA-AT-AA
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2550729 17 +  31725842 A---C-T--G-ATTA--t------------agga-at-aa
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               60156 29 +     73687 C---T-A--A-ATTT--ATTCCTTATTTCCTCAG-AT-AA
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              146735 17 +    277961 C---C-C--G-AGTG--G------------GAGA-AT-AA
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      278012 19 -    477199 CTC-C-A--G-AGTG--A------------TGAA-AT-CA
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              7159 19 -      9143 CTC-C-A--G-AGTG--G------------TAAA-AT-CA
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      4410 17 -   7690867 C---T-T--G-AGTA--G------------AGGA-AT-AC
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 16899 18 -     67322 CTC-G-T--T-GGTG--G-------------GGA-AT-AC
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           18610 17 -    119109 A---C-T--G-ATTA--T------------AGTG-AT-AA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              4837 14 +      5897 ---------G-AGTA--G------------AGGA-AT-AC
i Hylobates_abbotti.k141_493872                         I 1 C 0
s Hylobates_agilis.k141_624065                               1700 17 +      2112 C---T-T--G-AGTA--G------------AGGA-AT-AC
i Hylobates_agilis.k141_624065                          C 0 C 0
s Hylobates_klossii.k141_466549                             11277 14 +     11537 ---------G-AGTA--G------------AGGA-AT-AC
i Hylobates_klossii.k141_466549                         I 1 C 0
s Hylobates_pileatus_b.ContigUN                                 14624381 17 -  25970782 C---T-T--G-AGTA--G------------AGGA-AT-AC
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            1638 14 -      2977 ---------G-AGTA--G------------AGGA-AT-AC
i Hylobates_muelleri.k141_1389047                       I 1 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     5785 17 +     22540 A---C-T--G-ATTA--T------------AGGA-AT-AG
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7125502 17 +  13083262 t---t-t--g-atta--a------------agga-at-aa
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_4418183                                   1165 18 -      1457 C---T-T--G-AGCA--A------------AGGA-ATAAA
i Indri_indri.k141_4418183                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               8639 17 +     17520 C---C-C--G-AGTG--G------------GAGA-AT-AA
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8565553  9 +  11848649 A---C-T--G-AGTA--G----------------------
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               23257 17 +     37189 C---C-C--G-AGTG--G------------GAGA-AT-AA
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          49868 17 -    147782 C---T-T--G-AGTA--T------------AGGA-AT-AC
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   113881 19 -    115756 CGC-C-T--G-GGTT--G------------GAGA-AT-AA
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258406877 18 - 285822530 C---T-T--G-AACA--G------------AGGA-ATAAA
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        23628 18 +     39228 T---T-T--G-AGCA--A------------AGGA-ATAAA
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            53012 18 +     63517 C---T-T--G-AGCA--A------------AGGA-ATAAA
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        78271 18 +    116806 C---T-T--G-AGCA--A------------AGGA-ATAAA
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     31267 18 -     33031 C---T-T--G-AGCA--A------------AGGA-ATAAA
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3085588 19 -   3498232 CC-TC-T--C-AGTG--G------------GCGA-AT-AC
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    12906 17 +     22452 A---T-T--G-AGTA--G------------AAGA-AT-AA
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            135594 17 +   3060487 C---C-C--G-AGTG--G------------GAGA-AT-AA
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19248007 17 +  19376315 C---T-T--G-AGTA--G------------AGGA-AT-AC
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           10330 17 +     84689 T---T-G--G-AGCA--A------------ATGA-AT-AA
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3778079 17 +   6799190 T---T-G--G-AGCA--A------------AGGA-AT-AA
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20593855 17 -  62548349 C---T-T--G-AGTg--g------------ggaa-at-aa
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11087733 19 +  39895028 CCC-C-T--C-GGTG--G------------AGAA-AT-AC
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             19750 17 +     74745 C---T-T--G-AGTA--G------------AGGA-AT-AC
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12706206 17 +  12821369 C---T-T--G-AGTA--G------------AGGA-AT-AC
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                1851 17 -      3136 C---T-T--G-AGTA--G------------AGGA-AT-AC
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           46668 17 +     63263 C---T-T--G-AGTA--G------------AGGA-AT-AC
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                 1371 17 -      2568 C---T-T--G-AGTA--G------------AGGA-AT-AC
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 1957 17 -      7381 C---T-T--G-AGTA--G------------AGGA-AT-AC
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  45175 17 -     79256 C---T-T--G-AGTA--G------------AGGA-AT-AC
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196035283 17 + 196197964 C---T-T--G-AGTA--G------------AGGA-AT-AC
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11445451 17 +  11645122 C---T-T--G-AGTA--G------------AGGA-AT-AC
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   4122 17 -     46448 C---T-T--G-AGTA--G------------AGGA-AT-AC
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                1794 17 -     13212 C---T-T--G-AGTA--G------------AGGA-AT-AC
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 15475 17 -     55006 C---T-T--G-AGTA--G------------AGGA-AT-AC
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43840592 17 +  43892939 C---T-T--G-AGTA--G------------AGGA-AT-AC
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               16761 17 -     24607 C---T-T--G-AGTA--G------------AGGA-AT-AC
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               4127 17 -     27140 C---T-T--G-AGTA--G------------AGGA-AT-AC
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                701217 19 +    802869 TCC-C-T--C-ACTG--G------------GGGA-AT-AA
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43437169 17 -  43563597 C---T-T--G-AGTA--G------------AGGA-AT-AC
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4449995 17 -   4543643 C---T-T--G-AGTA--G------------AGGA-AT-AC
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            145247 19 +    252755 CCC-C-T--G-AATG--G------------GGGA-AT-AA
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             35324 19 +     58827 CCC-C-T--G-AATG--G------------GGGA-AT-AA
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36873343 17 +  64221397 t---t-t--g-atta--t------------agGA-AT-AA
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       64033 21 -    234502 CCCCC-A--G-ATTG--G------------GGGAAAT-AA
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433              593 19 -     87323 CC-TC-T--C-AGTG--G------------AGGA-AT-AT
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               12385 17 +     15977 A---C-T--A-AGTA--G------------AGGA-AT-AC
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1046583 17 -  26018355 a---g-t--a-TGCA--G------------ATGA-CT-AC
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Microcebus_murinus.CM007691.1                          16509900 18 +  47401472 c---t-t--g-agca--g------------agga-ataaa
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  33950 19 -     48017 C---T-T--A-ATTCTGA------------GAAT-AC-AG
i Microgale_talazaci.MicTal_scaffold_34660              C 0 I 176
s Micronycteris_hirsuta.MicHir_scaffold_37978               22318 19 -     32043 CCC-C-T--G-AGTA--G------------GGAA-AT-AC
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22819720 17 -  98408828 a---c-t--a-tGCA--G------------ATGA-AT-AC
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8209315 19 +  10048721 CCC-C-T--G-AGTG--G------------GGGA-CT-AA
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            33969 19 +     45743 CCC-C-T--G-AGTG--G------------GGGA-CT-AA
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         1722 17 +     29742 C---T-T--G-AGTA--G------------AGGA-AT-AA
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        11101 19 -    104932 CC-TC-T--C-AGTG--G------------GCGA-AT-AC
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     5286 18 +      8497 C---T-T--G-AGCA--G------------AGGA-ATAAA
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 146029 17 +    154973 C---C-C--A-AGTG--A------------GAGA-AT-AA
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                160843 19 +    265003 CCC-C-T--G-AGTA--G------------GGGA-AT-AA
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                   633 17 -     19904 C---C-C--T-AGTG--G------------GAGA-AT-AA
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  144523 18 -    168139 CCC-C-T--T-GGTG--G-------------GAA-AT-AC
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          19173 19 -    100666 CCC-C-T--G-GGTG--G------------GGGA-AT-AA
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70766224 17 +  92629107 a---c-t--a-atta--g------------ATGA-AT-AC
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75489283 17 +  98207768 a---c-t--a-atta--G------------ATGA-AT-AC
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67555511 17 +  89017189 a---c-t--a-atta--g------------ATGA-AT-AC
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74330461 17 +  97876770 a---c-t--a-atta--g------------ATGA-AT-AG
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             11507 17 +     98495 G---T-T--G-ATTA--A------------AGAA-CT-AA
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4423960 19 -  28371801 c-ctc-t--C-AGTG--G------------AGGA-AT-AT
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     89657 17 -    117718 A---C-T--G-ATTA--T------------GGCA-AT-AA
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               967471 19 +   8389877 c-ccc-t--G-GGTT--G------------GGGA-AT-AA
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5019148 19 +   6462685 c-ccc-t--G-GGTT--G------------GGGA-AT-AA
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3465052 19 -   3747815 c-ccc-t--G-GGTT--G------------GGGA-AT-AA
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        10266 19 +     66751 CCC-C-T--G-GGTT--G------------GGGA-AT-AA
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             4674 17 -      8794 C---A-T--G-AATG--A------------GAGA-AT-AA
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        I 1 C 0
s Nannospalax_galili.KL201303.1                            118077 17 +    362372 A---C-A--G-AGTA--G------------ATGA-AT-GA
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               8223 17 +     48152 C---T-C--G-AGTA--G------------AGGA-AT-AC
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4484493 19 -  14209539 CC-TC-T--C-AGTG--G------------GCGA-AT-AT
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3950644 17 -   4490290 C---C-C--G-AGTG--G------------GAGA-AT-AA
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  48933 19 +     94413 CCC-C-C--A-AGTA--G------------GGGA-AT-AA
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_220265                             145 17 +      1763 C---T-T--G-AGTA--G------------AGGA-AT-AC
i Nomascus_annamensis.k141_220265                       I 17 C 0
s Nomascus_concolor.k141_226614                               938 17 -      5092 C---T-T--G-AGTA--G------------AGGA-AT-AC
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_642452                            1721 17 +      2851 C---T-T--G-AGTA--G------------AGGA-AT-AC
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             24656 17 -  18771707 C---T-T--G-AGTA--G------------AGGA-AT-AC
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  2359 17 +      4512 C---T-T--G-AGTA--G------------AGGA-AT-AC
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                30538 19 +   3668941 CCC-C-T--T-GGTG--G------------AGAA-AT-AC
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65566765 17 -  95554990 T---T-G--G-AGCA--A------------AGGA-AT-AA
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            3494 17 +      6470 T---T-G--G-AGCA--A------------AGGA-AT-AA
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65669101 17 +  89412551 T---T-G--G-AGCA--A------------AGGA-AT-AA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4995669 11 -  23139505 -------------CA--C------------AGGA-AT-AA
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3685211 17 +  10294119 A---C-T--G-ATTA--T------------AGCA-AT-AG
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             679158 19 -   3126709 CC-TC-T--C-AGTG--G------------GGGA-AT-AC
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1079322 17 +   1425656 C---C-C--G-AATG--G------------GAGA-AT-TA
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         36616 17 +     78940 C---C-C--G-AGTG--G------------GAGA-AT-AA
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  124973 17 +    145789 A---C-T--A-TGCA--G------------ATGA-AT-AC
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  36774 17 +     62360 A---C-T--A-TGAA--G------------ATGA-AT-AC
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7224326 17 -   7562323 C---C-C--G-AGtg--g------------gaga-at-aa
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              57163 17 -     66828 C---T-T--G-AATG--G------------GGAT-AT-AA
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141875944 17 + 163896628 a---t-t--g-agTA--G------------AAGA-AT-AA
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      307823 19 -    505867 CCC-C-T--T-GGTG--G------------AGAA-AT-AC
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                         390 17 -     53940 T---T-G--G-AGCA--A------------AGGA-AT-AA
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18008363 17 -  38779656 T---T-G--G-AGCA--A------------AGGA-AT-AA
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134076881 17 - 275406953 C---C-C--A-agtg--g------------caaa-at-aa
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      78095 17 +    140051 C---C-C--A-AGTG--G------------CAAA-AT-AA
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127574368 17 - 205426864 C---T-T--G-AGTA--G------------AGGA-AT-AC
i Pan_paniscus.CM003386.1                               C 0 I 26
s Pan_troglodytes.CM009241.2                            120151521 17 - 196562556 C---T-T--G-AGTA--G------------AGGA-AT-AC
i Pan_troglodytes.CM009241.2                            C 0 I 26
s Panthera_onca.PanOnc_flattened_line_1615                  33953 17 +    295523 C---C-T--C-GGTG--G------------AGGA-AT-AC
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3637689 17 +  18214204 C---C-T--C-GGTG--G------------AGGA-AT-AC
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5027362 17 -   6340057 C---C-T--C-GGTG--G------------AGGA-AT-AC
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1065741 17 -   1292953 C---C-C--a-agtg--g------------caaa-at-aa
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188155957 17 - 188283584 C---T-T--G-AGTA--G------------AGGA-AT-AC
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             4273 17 +      5367 C---T-T--G-AGTA--G------------AGGA-AT-AC
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47513344 17 +  47705337 C---T-T--G-AGTA--A------------AGGA-AT-AC
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 67321 17 -    104429 C---T-T--G-AGTA--G------------AGGA-AT-AC
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    5854 17 +     14967 C---T-T--G-AGTA--A------------AGGA-AT-AC
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 1714 17 -      7628 C---T-T--G-AGTA--G------------AGGA-AT-AC
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    115400 19 -    135482 CCC-C-T--T-GGTG--G------------GGGA-AT-AC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           5078 17 -     23713 T---T-G--T-AGTA--A------------AGGA-AA-AA
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            24387 17 -     27972 T---T-G--T-AGTA--A------------AGGA-AA-AA
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      44231 17 -     45160 G---T-T--G-AGTA--A------------AGGA-AT-AA
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4950011 17 -   8017169 A---C-T--A-TGTA--G------------AGGA-AT-AC
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    12118 17 -     36578 C---C-T--G-ATTA--T------------AGGA-AT-AA
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            120933 17 -    122454 G---C-C--G-AGTG--G------------GAGA-AT-AA
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1987485                           1742 17 -      5908 C---T-C--G-AGTA--G------------AGGA-AT-AC
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       2366 17 -     17985 C---T-T--G-AGTA--G------------AGGA-AT-AC
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            1733 17 +      7694 C---T-T--G-AGTA--G------------AGGA-AT-AC
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26740211 17 +  26888534 C---T-T--G-AGTA--G------------AGGA-AT-AC
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            97090 19 +    112873 CCC-C-T--G-GATG--G------------GAGA-AT-AA
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             43341 17 -     61926 C---T-T--A-AGTA--G------------AGGA-AT-AC
i Pithecia_albicans.k141_991845                         I 2 C 0
s Pithecia_chrysocephala.k141_159118                        24772 17 +     78826 C---T-T--A-AGTA--G------------AGAA-AT-AC
i Pithecia_chrysocephala.k141_159118                    I 2 C 0
s Pithecia_hirsuta.k141_1152968                              8721 17 -     15800 C---T-T--A-AGTA--G------------AGGA-AT-AC
i Pithecia_hirsuta.k141_1152968                         I 2 C 0
s Pithecia_mittermeieri.k141_2119203                        11919 17 -     16101 C---T-T--A-AGTA--G------------AGGA-AT-AC
i Pithecia_mittermeieri.k141_2119203                    I 2 C 0
s Pithecia_pissinattii.k141_1102319                          5228 17 +      9673 C---T-T--A-AGTA--G------------AGGA-AT-AC
i Pithecia_pissinattii.k141_1102319                     I 2 C 0
s Pithecia_pithecia.tarseq_313                           13474224 17 -  19735023 C---T-T--A-AGTA--G------------AGGA-AT-AC
i Pithecia_pithecia.tarseq_313                          I 2 C 0
s Pithecia_vanzolinii.k141_831006                           13130 17 -     31692 C---T-T--A-AGTA--G------------AGGA-AT-AC
i Pithecia_vanzolinii.k141_831006                       I 2 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           5013 17 +     21690 C---C-C--A-AGTG--G------------GAGA-AT-AA
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       22571 17 +     44506 C---T-T--G-AGTA--G------------AGGA-AT-AC
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        22783 17 +     67491 C---T-T--G-AGTA--G------------AGGA-AT-AC
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      13022 17 -     98129 C---T-T--G-AGTA--G------------AGGA-AT-AC
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     22622 17 +    147771 C---T-T--G-AGTA--G------------AGGA-AT-AC
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        22877 17 -     23762 C---T-T--G-AGTA--G------------AGGA-AT-AC
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          3343 17 -     55515 C---T-T--G-AGTA--G------------AGGA-AT-AC
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         22696 17 +    152463 C---T-T--G-AGTA--G------------AGGA-AT-AC
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                        413 17 -    119457 C---T-T--G-AGTA--G------------AGGA-AT-AC
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         12418 17 +    134592 C---T-T--G-AGTA--G------------AGGA-AT-AC
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          23006 17 -     75465 C---T-T--G-AGTA--G------------AGGA-AT-AC
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              186890 17 -    373494 C---T-T--G-AGTA--G------------AGGA-AT-AC
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19807538 17 +  19899266 C---T-T--G-AGTA--G------------AGGA-AT-AC
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               5468 17 -     15069 C---T-C--A-AGTA--G------------AGGA-AT-AC
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              5602 17 +     14865 C---T-C--A-AGTA--G------------AGGA-AT-AC
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                1247 29 -      9567 G---T-A--A-ATTT--ATTCCTTATTTCCTCAG-AT-AA
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6848258 18 +  12164890 c---t-t--g-aaca--g------------agga-ataaa
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coronatus.k141_1353159                         3315 18 +     11805 C---T-T--G-AGCA--A------------AGGA-ATAAA
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           42659 18 +     52369 C---T-T--G-AGCA--A------------AGGA-ATAAA
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         35047 18 -     44753 C---T-T--G-AGCA--A------------AGGA-ATAAA
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            16969 18 +     27322 C---T-T--G-AGCA--A------------AGGA-ATAAA
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       16605 18 -     53241 C---T-T--G-AGCA--A------------AGGA-ATAAA
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         38868 18 -     48185 C---T-T--G-AGCA--A------------AGGA-ATAAA
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           33937 17 +     77221 a---c-t--A-AGTA--G------------AGGA-AT-AC
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            3487 19 -     27784 CC-TC-T--G-AGTA--g------------ggga-at-aa
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        246268 19 -    344369 CC-TC-T--C-AGTG--G------------AGGA-AT-AT
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13245596 19 -  17261082 t-ccc-t--C-AGCC--G------------AGGA-AT-AA
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             603546 19 -   3946241 t-ccc-t--C-AGCC--G------------AGGA-AT-AA
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131533947 17 - 161321710 C---C-T--C-GGTG--G------------AGGA-AT-AC
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             29586 17 +     56732 C---T-G--G-AGTA--G------------AGGA-AT-AC
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6806077 17 +   6970761 C---T-G--G-AGTA--G------------AGGA-AT-AC
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             5471 17 +     18040 C---T-G--G-AGTA--G------------AGGA-AT-AC
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                15399 17 +     68503 C---C-C--A-AGTG--G------------GAGA-AT-TA
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13915228 17 +  90463843 a---c-t--a-atta--g------------atga-at-AC
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1787432 19 +   2252614 c-ccc-a--g-agag--g------------tgaa-at-aa
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_1391695                           1699 17 -      1866 C---T-C--G-AGTA--G------------AGGA-AT-AC
i Rhinopithecus_bieti.k119_1391695                      C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206377356 17 - 206558726 C---T-C--G-AGTA--G------------AGGA-AT-AC
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44856256 17 -  45163003 C---T-C--G-AGTA--G------------AGGA-AT-AC
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                18923 19 +    109198 TC-TC-T--C-AGTG--A------------GGGA-AT-AA
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       7561 17 +     12214 C---C-T--G-AGTG--G------------CAAA-AT-AA
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15672437 17 -  43202129 c---t-t--g-agta--t------------agGA-AT-AC
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        4354 17 +     34089 C---T-T--G-AGTA--T------------AGGA-AT-AC
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              4295 17 -     60842 C---T-T--G-AGTA--T------------AGGA-AT-AC
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              4390 17 +     67014 C---T-T--G-AGTA--T------------AGGA-AT-AC
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              4368 17 +     60816 C---T-T--G-AGTA--T------------AGGA-AT-AC
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 4305 17 -     76454 C---T-T--G-AGTA--T------------AGGA-AT-AC
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17341030 17 -  30362882 C---T-T--G-AGTA--T------------AAGA-AT-AC
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         20389 17 -     62485 C---T-T--G-AGTA--T------------AAGA-AT-AC
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   31915 17 -    114521 C---C-T--G-AGTC--C------A----GG--A-AT-AG
i Scalopus_aquaticus.ScaAqu_scaffold_9300               I 2 C 0
s Semnopithecus_entellus.k141_1572367                        3083 17 +     15331 C---T-C--A-AGTA--G------------AGGA-AT-AC
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       8480 17 +     20762 C---T-C--G-AGTA--G------------AGGA-AT-AC
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         118482 17 +    130994 C---T-C--G-AGTA--G------------AGGA-AT-AC
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           37269 17 +     46263 C---T-C--G-AGTA--G------------AGGA-AT-AC
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     30383 17 +     42640 C---T-C--A-AGTA--G------------AGGA-AT-AC
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        13427 17 +     30600 C---T-C--G-AGTA--G------------AGGA-AT-AC
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   99967 14 -    120886 A---C-T--A-CATA--G------------A----CT-AC
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            18495 17 +    739146 C---C-T--G-ATTG--G------------GGTA-GT-AA
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2239420 17 +   2842873 t---t-t--g-atta--a------------agga-at-aa
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             234389 19 -    276980 CC-TT-T--C-AGTG--G------------AGAA-AT-AC
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            27202  4 +     62062 CCC-C-----------------------------------
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189271471 20 + 218635234 CTCTC-T--G-AGTG--g------------gaga-at-aa
i Sus_scrofa.CM000824.4                                 I 8 C 0
s Symphalangus_syndactylus.tarseq_24                        14641 17 -  13920577 C---T-T--G-AGTA--G------------AGGA-AT-AC
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_148405               5508 19 -      6063 CCC-C-T--G-AGTG--G------------GGGA-AC-AA
i Tadarida_brasiliensis.TadBra_scaffold_148405          I 118 n 19
s Tamandua_tetradactyla.TamTet_scaffold_26877               14335 17 +     45698 C---C-T--G-AATG--A------------GAGA-AT-AA
i Tamandua_tetradactyla.TamTet_scaffold_26877           I 1 C 0
s Tapirus_indicus.TapInd_scaffold_176                      806556 14 +   1148477 ---------A-AGTG--G------------GATA-AT-AA
i Tapirus_indicus.TapInd_scaffold_176                   I 3 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  57247 14 +     99546 ---------A-AGTG--G------------GATA-AT-AA
i Tapirus_terrestris.TapTer_scaffold_14939              I 3 C 0
s Tarsius_lariang.k141_609102                               26168 17 +     42269 C---T-T--G-AATA--G------------AGGA-AT-AA
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               59484 17 +     65473 C---T-T--G-AATA--G------------AGGA-AT-AA
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194007484 17 - 194193292 C---T-T--G-AGTA--G------------AGGA-AT-AC
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             38946 18 -     47444 A---C-T--GCAGCA--G------------AAGA-TT-AA
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  5170 15 +      6782 ------T--G-AGTG--A------------GAGA-AT-AA
i Tolypeutes_matacus.TolMat_scaffold_269431             I 1 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  135489  7 -    259118 CCC-C-T--G-A----------------------------
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 I 1
s Trachypithecus_auratus.k141_738098                        26587 17 +     38948 C---T-C--G-AGTA--G------------AGGA-AT-AC
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   20316 17 -     32910 C---T-C--G-AGTA--G------------AGGA-AT-AC
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      1704 17 -     12939 C---T-C--G-AGTA--G------------AGGA-AT-AC
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       1639 17 -     14244 C---T-C--G-AGTA--G------------AGGA-AT-AC
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           43037 17 -     54611 C---T-C--G-AGTA--G------------AGGA-AT-AC
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                         843 17 -     11566 C---T-C--G-AGTA--G------------AGGA-AT-AC
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     3015 17 -     15592 C---T-C--G-AGTA--G------------AGGA-AT-AC
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          1672 17 +     14371 C---T-C--G-AGTA--G------------AGGA-AT-AC
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  51424 17 +     51589 C---T-C--G-AGTA--G------------AGGA-AT-AC
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       14605 17 +     14732 C---T-C--G-AGTA--G------------AGGA-AT-AC
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       5076 17 -     28054 C---T-C--G-AGTA--G------------AGGA-AT-AC
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44659876 17 -  44834318 C---T-C--G-AGTA--G------------AGGA-AT-AC
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       2180 17 +     13828 C---T-C--G-AGTA--G------------AGGA-AT-AC
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   4787 18 +     90398 CC--C-T--G-AATG--G------------GAGA-AT-AA
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16084512 29 +  31416278 C---T-g--g-attt--attctttatttcctcAG-AT-AA
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2792536 17 -   3938065 a---t-t--a-attg--g------------GGGG-AT-AA
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    4744 17 +     13056 A---T-T--A-ATTA--G------------GGGA-AT-AA
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69313043 17 -  96451834 C---C-C--G-AGtg--g------------gaga-at-aa
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                    959  9 +     10241 C---C-T--G-AGTC--T----------------------
i Uropsilus_gracilis.UroGra_scaffold_69449              I 2 C 0
s Ursus_maritimus.KK498671.1                              6514406 19 +  28682327 CC-TC-T--C-AGTG--G------------GGGA-AT-AC
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  4961 18 -     20643 C---T-T--G-AGCA--G------------AGGA-ATAAA
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             24502 18 -     33872 C---T-T--G-AGCA--G------------AGGA-ATAAA
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1524284 17 -   2331223 C---C-T--G-AGTG--G------------GAGA-AC-AA
i Vicugna_pacos.KN269600.1                              I 2 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                137916 19 -    281493 CCC-C-T--T-GGTG--G------------AGAA-AT-AC
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       126538 17 -    134049 A---T-T--A-ATTA--G------------AGAT-AT-AA
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        213884 19 -    227762 CC-TC-T--C-AGTA--G------------GGGA-AT-AC
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     14625 17 -     20485 A---C-T--G-AGTA--G------------ATAA-AT-AA
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           6535 17 -      8775 C---C-C--A-AGTG--G------------GAGA-AT-AA
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Sorex_araneus.JH798170.1                               17750754 3364 -  27805282 I
e Hylobates_pileatus_a.tarseq_592                             33391 319 -     60944 I
e Propithecus_coquerelli.NW_012147997.1                    667273 6500 -   2312742 I
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               11505 14 +    209709 A-AATTTTGCACCT---------------------G
s Acinonyx_jubatus.LLWD01000356.1                         2033626 35 +   3721120 AAA-CATTGCACCAGATATAGAATGATAACACAGAA
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    112255 13 -    189883 A-A-AGTTACATCA---------------------A
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10656936 35 +  23371972 AAA-TATCGCACCAGATATAGAATGATATCATAGAA
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7094280 35 -  16596857 AAA-TATCATACCAGATATAGAATGATATCATAGAA
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                    993 14 -     60446 A-AATTTTGCACCC---------------------A
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         1716 14 -     29318 A-AATTTTGCACCC---------------------A
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                          651 14 +     38766 A-AATTTTGCACCC---------------------A
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          1610 14 -     80423 A-AATTTTGCACCC---------------------A
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             9908 14 -     18050 A-AATTTTGTACCC---------------------A
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                 11001 14 -     11521 A-AATTTTGTACCC---------------------A
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                             10585 14 -     21359 A-AATTTTGTACCC---------------------A
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                 200 14 +      2129 A-AATTTTGTACCC---------------------A
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          9884 14 -     10438 A-AATTTTGTACCC---------------------A
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            6540 14 +      7047 A-AATTTTGTACCC---------------------A
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             9820 14 +     10410 A-AATTTTGTACCC---------------------A
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            3628 14 -      4927 A-AATTTTGTACCC---------------------A
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3519756 14 +   4113121 aaa-tattgcatcA---------------------A
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      389954 14 -    631301 AAA-TATTGTACTA---------------------C
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            30340 14 +     33004 AAA-TATTGCATCA---------------------A
i Antilocapra_americana.AntAmePen_scaffold_42841        I 1 C 0
s Aotus_azarae.k141_3170768                                 62270 14 +     78111 A-AATTTTGTACCC---------------------A
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            5211 14 +     22701 A-AATTTTGTACCC---------------------A
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5749168 14 +   9889416 A-AATTTTGTACCC---------------------A
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             5755 14 -    104377 A-AATTTTGTACCC---------------------A
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               5757 14 +     23246 A-AATTTTGTACCC---------------------A
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     3363 13 +      5067 A-A-ATTCACATCA---------------------A
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_587554                         699 14 +      9265 A-AAAATTGTACCA---------------------A
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 8365 14 -     29036 AAA-TAGTCTACCA---------------------C
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9539015 14 +  39197703 A-AATTTTGTACCC---------------------G
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             60288 14 +     85812 A-AATTTTGTACCT---------------------G
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                11300 14 +     89302 A-AATTTTGTACCC---------------------G
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             15803 14 -     58268 A-AATTTTGTACCC---------------------G
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             63796 14 +    119057 A-AATTTTGTACCC---------------------G
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               5765 14 -     25888 A-AATTTTGTACCC---------------------G
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 6417 14 -     16375 A-AAGTTTGTACCA---------------------A
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                                 37 14 +      6337 A-AAGTTTGTACCA---------------------A
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26379780 14 +  51448160 aaa-tattgCACCA---------------------A
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        5011 14 -     13118 AAA-TATTGCACCA---------------------A
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   42819 14 -     72089 AAA-TATTGCATCA---------------------A
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6559493 14 +   6870073 AAA-TATTGCATCA---------------------A
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138139597 14 - 161108492 AAA-TATTGCATCA---------------------N
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     572134 14 -    998990 AAA-TATTGCATCA---------------------A
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136295330 14 - 158972876 AAA-TATTGCATCA---------------------A
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1232413 14 -   1914593 AAA-TATTGCATCA---------------------A
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               113650 14 -    171031 A-AATTTTGTACCT---------------------G
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 12681 14 +    125063 A-AATTTTGTACCT---------------------G
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                14726 14 -    216513 A-AATTTTGTACCT---------------------G
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        7266 14 -    134917 A-AATTTTGTACCT---------------------G
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3219197 14 -   8989139 AAA-CATAGCACCA---------------------G
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           396899 14 -  15254737 AAA-CATAGCACCA---------------------G
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2972634 14 +   6889770 AAA-CATAGCACCA---------------------G
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11519095 35 +  39901454 AAA-TATCGTACCTGATATAGAATGATATCATAGAA
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   14120 35 +     87036 AAA-TATCGTACCTGATATAGAATGATATCACAGAA
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11265762 35 -  35597290 AAA-TATCGTACCTGATATAGAATGATATCATAGAA
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11088296 35 +  39895921 AAA-TATCGTACCTGATATAGAATGATATCATAGAA
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16455311 35 -  44759192 AAA-TATCGTACCTGATATAGAATGATATCATAGAA
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21324832 14 + 157394656 aaa-tattgcatcA---------------------A
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135706059 14 - 157403528 aaa-tattgcatCA---------------------A
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          308703 14 +    345090 A-AATCTTGCACTA---------------------A
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               59155 14 +     67245 AAA-TATTGTACCA---------------------C
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   30364 13 +     33760 G-A-ATTTTCCCCA---------------------A
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   158506 14 -    276539 AAA-TATTACACCG---------------------A
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15786246 12 -  24422027 --A-AAGTACGTTA---------------------A
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15798181 12 -  24440124 --A-AGGTACATTA---------------------A
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       176372 12 +    436027 --A-AGGTACATTA---------------------A
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18890503 14 -  29618158 A-AATTTTGTGCCC---------------------A
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 8047 14 -     26817 A-AATTTTGTGCCC---------------------A
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                12287 14 +     25043 A-AATTTTGTGCCC---------------------A
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         7737 14 +     21754 A-AATCTTGCACTA---------------------A
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4363512 14 +   7569818 aaa-tattgcaCCA---------------------G
i Ceratotherium_simum.JH767818.1                        C 0 I 6
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         3269 14 -      9338 AAA-TATTGCACCA---------------------G
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 I 6
s Cercocebus_atys.KQ010443.1                              6554938 14 +   6739814 A-AATTTTGCACCC---------------------A
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      26415 14 +     60454 A-AATTTTGCACCC---------------------A
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          1620 14 -     21101 A-AATTTTGCACCC---------------------A
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         58930 14 -    107033 A-AATTTTGCACCC---------------------A
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        1822 14 -     17608 A-AATTTTGCACCC---------------------A
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          29317 14 +     30494 A-AATTTTGCACCC---------------------A
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          58163 14 -     59240 A-AATTTTGCACCC---------------------A
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          1864 14 +     16677 A-AATTTTGCACCC---------------------A
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           24022 14 +     35983 A-AATTTTGCACCC---------------------A
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11990550 14 +  12117833 A-AATTTTGCACCC---------------------A
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46477308 14 +  46592721 A-AATTTTGCACCC---------------------A
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      40859 14 -     45581 A-AATTTTGCACCC---------------------A
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       1865 14 +     35577 A-AATTTTGCACCC---------------------A
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        1641 14 -     25661 A-AATTTTACACCC---------------------A
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        1619 14 -     17744 A-AATTTTGCACCC---------------------A
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        21235 14 +     37128 A-AATTTTGCACCC---------------------A
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           2436 14 -      6963 AAA-TATTGCACCA---------------------A
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      I 1 C 0
s Cheirogaleus_major.k141_1157592                           58703 14 -     68416 A-AATTTTGTACCA---------------------A
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            7747 14 +     13308 A-AATTTTGTACCA---------------------A
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             5304 14 -     18223 A-AATTTTGTACTC---------------------A
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             22327 14 +     25473 A-AATTTTGTACTC---------------------G
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           41362 14 +     57117 A-AATTTTGTACTC---------------------A
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          46041 14 +     54541 A-AATTTTGTACTC---------------------A
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15961410 13 +  43084221 a-a-atgtacttcA---------------------G
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         70857 14 +    196370 A-AATTTTGTACCC---------------------G
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          15037 14 +     40510 A-AATTTTGTACCC---------------------G
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15138781 14 -  15256731 A-AATTTTGCACCC---------------------A
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      33828 14 -     53260 A-AATTTTGCACCC---------------------A
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101144392 14 + 101219884 A-AATTTTGCACCC---------------------A
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                16124 14 -     21363 AAA-TATTGCACCA---------------------A
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           761431 14 +    964067 AAA-TATTGCACCA---------------------A
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_3549804               51  9 -       354 ------TTGCACCA---------------------A
i Chrysochloris_asiatica.ChrAsi_scaffold_3549804        N 0 C 0
s Colobus_angolensis.KN985967.1                          10886158 14 +  10971483 A-AATTTTGCACCC---------------------G
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147664322 14 + 156195979 A-AATTTTGCACCC---------------------G
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            16307 14 +     23629 A-AATTTTGCACCC---------------------G
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60613251 12 +  78930452 AAA---TTGCACCA---------------------G
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         39339 14 -     40477 AAG-TATTTCACCA---------------------A
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 278209 13 -    399297 T-A-AGTTACACCA---------------------A
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53028891 13 +  72327488 A-A-AGTTATATCA---------------------G
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_88140              1818 14 +     11655 AAA-TAAAAAACCA---------------------A
i Crocidura_indochinensis.CroInd_scaffold_88140         I 195 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            51640 32 -     70449 AAA-TATTGCAGCAGATATA-AA--ATATCACAGAA
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  207811 11 -    956709 A-T-ATGTGCAT-----------------------A
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 30394 13 -     67205 A-A-ATAAATATCA---------------------G
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                17430 13 +     26546 A-A-ATGTACATCA---------------------A
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             58515 13 -    236241 A-A-AGGCACATCA---------------------A
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          183311 14 -   6883506 aaa-tattgCACCA---------------------A
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16844562 14 +  31942871 A-AATTTTGTACCA---------------------A
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80036458 14 -  96802777 AAA-TATTGCACCA---------------------A
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18698430 14 -  18957592 aaa-tattgtacCA---------------------C
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 322161 14 +    993696 AAA-TATTGCACCA---------------------G
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 I 6
s Diceros_bicornis.DicBicMic_scaffold_9545                   2814 14 +    151128 AAA-TATTGCCCCA---------------------G
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 I 6
s Dinomys_branickii.DinBra_scaffold_1996                   156667 13 +    228994 A-A-ATGTACATCA---------------------A
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3655999 12 +   4240102 A---ATTTTCATAG---------------------A
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 27632 12 +     28912 A---ATTTTCATAG---------------------A
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                35766 12 -     73477 A-A-ATGTA-GTTA---------------------A
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22998169  9 -  44670279 ------cttcccca---------------------a
i Echinops_telfairi.JH980316.1                          I 189 C 0
s Eidolon_helvum.KE772537.1                                 11863 14 +     24177 AAA-TGTTGTGCCA---------------------G
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1491108 14 +   1727528 AAA-TATTGCATCG---------------------A
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7815363 14 +  15467074 AAA-TATTCCAACA---------------------A
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        239438 13 -    369425 A-A-AGTTGCATCA---------------------G
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           6551 13 -      7838 A-A-AGTTGCATCA---------------------G
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85871799 35 +  99434291 AAA-TATCGTACCAGATATAGGATGATATCATAGAA
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4703809 14 +   6522550 aaa-tattgcaCCA---------------------G
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5852615 14 -   7175178 aaa-tattacaccA---------------------G
i Equus_asinus.JREZ01000062.1                           C 0 I 6
s Equus_caballus.CM000402.2                              13351118 14 +  41866177 aaa-tattacaccA---------------------G
i Equus_caballus.CM000402.2                             C 0 I 6
s Equus_przewalskii.ATBW01073585.1                          12608 14 +     92910 aaa-tattacaccA---------------------G
i Equus_przewalskii.ATBW01073585.1                      C 0 I 6
s Erythrocebus_patas.Contig8                             48770959 14 -  48907691 A-AATTTTGCACCC---------------------A
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          314664 14 +    330699 AAA-TATTGCACCA---------------------A
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             61118 14 +     89355 AAA-TATTGCACCA---------------------A
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              4755 14 +     13586 A-AATTTTGTACCA---------------------A
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               4689 14 -      6809 A-AATTTTGTACCA---------------------A
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            11162 14 +     36558 A-AATTTTGTACCA---------------------A
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             7484 14 +     60246 A-AATTTTGTACCA---------------------A
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                10962 14 +    109717 A-AATTTTGTACCA---------------------A
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               15346 14 +     16540 A-AATTTTGTACCA---------------------A
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                15620 14 +     27497 A-AATTTTGTACCA---------------------A
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           18076 14 +     26808 A-AATTTTGTACCA---------------------A
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                32812 14 +     46535 A-AATTTTGTACCA---------------------A
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              15534 14 -     29447 A-AATTTTGTACCA---------------------A
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129892585 35 - 159252932 AAA-CATTGCACCAGATATAGAATGATAACACAGAA
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129279672 35 - 158578461 AAA-CATTGCACCAGATATAGAATGATAACACAGAA
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 20817 35 +     52776 AAA-CATTGCACCAGATATAGAATGATAACACAGAA
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Galago_moholi.ctg555                                     210587 14 -    847004 A-CATTTTGTACCA---------------------A
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           12966 14 -     43889 A-CATTTTGTACCA---------------------A
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          10041 14 +     27357 A-CATTTTGTACCA---------------------A
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               155929 13 +    324696 A-C-TTCTGTGCCA---------------------G
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    180905 14 -    189561 AAA-TATTGCATCA---------------------G
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           12741 13 -     18683 A-A-AATTGAATCA---------------------A
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               5020 14 -     14630 A-AATTTTGCACCT---------------------G
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119652119 14 - 195582420 A-AATTTTGCACCT---------------------G
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   77286 13 +    118900 A-A-ATTTGCATCA---------------------A
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         1534 14 +     10286 A-AATTTTGTACCA---------------------A
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                               11 14 -     11661 A-AATTTTGTACCA---------------------A
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             5340 14 +     56096 A-AATTTTGTACCA---------------------A
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        28590 14 -     42470 A-AATTTTGTACCA---------------------A
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        45213 14 -     54384 A-AATTTTGTACCA---------------------A
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              16845 35 +     53719 AAA-TATTGCAGCAGATATAGAATGATGTCACAGAA
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                27104 14 -     91191 AAA-TATTGCATCA---------------------A
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2550746 13 +  31725842 a-a-atgtacatCA---------------------G
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               60185 14 +     73687 AAA-TATTGCATCA---------------------A
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              146752 14 +    277961 AAA-TATTGCACCA---------------------A
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      278031 14 -    477199 AAA-TATTGCACCA---------------------T
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              7178 14 -      9143 AAA-TATTGCATCA---------------------G
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      4427 14 -   7690867 A-AATTTTGCACCT---------------------G
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 16917 35 -     67322 AAA-TATTGCAGCAGATAAAGAATGGTATCACAGGA
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           18627 13 -    119109 A-A-ATGTACATTA---------------------A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              4851 14 +      5897 A-AATTTTGCACCT---------------------G
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_624065                               1717 14 +      2112 A-AATTTTGCACCT---------------------G
i Hylobates_agilis.k141_624065                          C 0 C 0
s Hylobates_klossii.k141_466549                             11291 14 +     11537 A-AATTTTGCACCT---------------------G
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14624398 14 -  25970782 A-AATTTTGCACCT---------------------G
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            1652 14 -      2977 A-AATTTTGCACCT---------------------G
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     5802 13 +     22540 A-A-ATGTGCATCA---------------------G
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7125519 13 +  13083262 a-a-attcacATCA---------------------A
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_4418183                                   1183 14 -      1457 A-AAATTTGTACCA---------------------A
i Indri_indri.k141_4418183                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               8656 14 +     17520 AAA-TATTGCACCA---------------------A
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               23274 14 +     37189 AAA-CATTGCACCA---------------------G
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          49885 14 -    147782 A-AATTTTGTACCC---------------------A
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   113900 14 -    115756 AAA-TATTGTATCA---------------------A
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258406895 14 - 285822530 A-AATTTTGTACCA---------------------A
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        23646 14 +     39228 A-AATTTTGTACTA---------------------A
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            53030 14 +     63517 A-AATTTTGTACTA---------------------A
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        78289 14 +    116806 A-AATTTTGTACTA---------------------A
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     31285 14 -     33031 A-AATTTTGTACTA---------------------A
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3085607 35 -   3498232 AAA-TATCGCACCAGATATAGAATGATATCATAGAA
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    12923 13 +     22452 A-A-TACTACACCA---------------------C
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            135611 14 +   3060487 AAA-TATTGCACCA---------------------A
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19248024 14 +  19376315 A-AATTTTGCACCC---------------------A
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           10347 14 +     84689 A-AATTTTATATCA---------------------A
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3778096 14 +   6799190 A-AATTTTATATCA---------------------A
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20593872 14 -  62548349 aaa-tattgtatCA---------------------A
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11087752 35 +  39895028 AAA-TATCGTACCTGATATAGAATGATATCATAGAA
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             19767 14 +     74745 A-AATTTTGCACCC---------------------A
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12706223 14 +  12821369 A-AATTTTGCACCC---------------------A
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                1868 14 -      3136 A-AATTTTGCACCC---------------------A
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           46685 14 +     63263 A-AATTTTGCACCC---------------------A
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                 1388 14 -      2568 A-AATTTTGCACCC---------------------A
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 1974 14 -      7381 A-AATTTTGCACCC---------------------A
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  45192 14 -     79256 A-AATTTTGCACCC---------------------A
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196035300 14 + 196197964 A-AATTTTGCACCC---------------------A
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11445468 14 +  11645122 A-AATTTTGCACCC---------------------A
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   4139 14 -     46448 A-AATTTTGCACCC---------------------A
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                1811 14 -     13212 A-AATTTTGCACCC---------------------A
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 15492 14 -     55006 A-AATTTTGCACCC---------------------A
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43840609 14 +  43892939 A-AATTTTGCACCC---------------------A
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               16778 14 -     24607 A-AATTTTGCACCC---------------------A
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               4144 14 -     27140 A-AATTTTGCACCC---------------------A
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                701236 14 +    802869 AAA-TGTTGTGCCA---------------------G
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43437186 14 -  43563597 A-AATTTTGCACCC---------------------A
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4450012 14 -   4543643 A-AATTTTGCACCC---------------------A
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            145266 14 +    252755 AAA-TGTTGTACCA---------------------A
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             35343 14 +     58827 AAA-TATTGTACCA---------------------A
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36873360 13 +  64221397 A-A-ATTGACATCA---------------------A
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       64054 14 -    234502 AAT-TATTGCACCA---------------------A
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433              612 32 -     87323 AAA-TATCGTACCAGATATAGAATGATA-TA--GAA
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               12402 13 +     15977 A-A-CAGTACATCA---------------------A
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1046600 13 -  26018355 A-A-AATTACATCA---------------------G
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Microcebus_murinus.CM007691.1                          16509918 14 +  47401472 a-aattttGTACCA---------------------A
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  34145  9 -     48017 ------CTTTACCA---------------------A
i Microgale_talazaci.MicTal_scaffold_34660              I 176 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               22337 14 -     32043 AAG-TATTGCACCA---------------------C
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22819737 13 -  98408828 A-G-AGTTGCATCA---------------------G
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8209334 14 +  10048721 AAA-TATTGCACCA---------------------A
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            33988 14 +     45743 AAA-TATTGCACCA---------------------A
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         1739 14 +     29742 A-AATTTTGCACCC---------------------A
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        11120 35 -    104932 AAA-TATCACACCAGATATAGAATGATATCATAGAA
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     5304 14 +      8497 A-AATTTTGTACCA---------------------A
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 146046 14 +    154973 AAA-TATTGCACCA---------------------A
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                160862 14 +    265003 AAA-TATTGCACCA---------------------C
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                   650 14 -     19904 AAA-TATTGCATCA---------------------A
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  144541 35 -    168139 AAA-TCTTGCAGCAGATATAGAATGATGTCACAGAA
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          19192 14 -    100666 AAA-TATTGCACCA---------------------A
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70766241 13 +  92629107 A-A-AATTGCATCA---------------------A
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75489300 13 +  98207768 A-A-AATTGCATCA---------------------G
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67555528 13 +  89017189 A-A-AATTGCATCA---------------------A
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74330478 13 +  97876770 A-A-AATTGCATCA---------------------G
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             11524 13 +     98495 A-A-AGTTTCATCA---------------------A
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4423979 35 -  28371801 AAA-TACCGTACCAGATATAGAATGATATCATAGAA
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     89674 13 -    117718 A-A-ATGTACATCA---------------------G
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               967490 14 +   8389877 AAA-TATTGCACCA---------------------A
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5019167 14 +   6462685 AAA-CATTGCACCA---------------------A
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3465071 14 -   3747815 AAA-TATTGCACCA---------------------A
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        10285 14 +     66751 AAA-TATTGCACCA---------------------A
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             4691 14 -      8794 AAA-TATTGCACCA---------------------A
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            118094 13 +    362372 A-A-AATTGCATCA---------------------G
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               8240 14 +     48152 A-AATTTTGCACCC---------------------G
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4484512 35 -  14209539 AAA-TATCGCACCAGATATAGAATGATATCATAGAA
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3950661 14 -   4490290 AAA-TATTGCACCA---------------------A
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  48952 14 +     94413 AAC-TATTGCACCA---------------------A
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_220265                             162 14 +      1763 A-AATTTTGCACCT---------------------G
i Nomascus_annamensis.k141_220265                       C 0 C 0
s Nomascus_concolor.k141_226614                               955 14 -      5092 A-AATTTTGCACCT---------------------G
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_642452                            1738 14 +      2851 A-AATTTTGCACCT---------------------G
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             24673 14 -  18771707 A-AATTTTGCACCT---------------------G
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  2376 14 +      4512 A-AATTTTGCACCT---------------------G
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                30557 35 +   3668941 AAA-TATCGTACCTGATATAGAATGATATCATAGAA
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65566782 14 -  95554990 A-AATTTTATACCA---------------------A
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            3511 14 +      6470 A-AATTTTATACCA---------------------A
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65669118 14 +  89412551 A-AATTTTATACCA---------------------A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4995680 13 -  23139505 A-A-TACTGTACCA---------------------A
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3685228 13 +  10294119 A-A-ATATACATCA---------------------G
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             679177 35 -   3126709 AAA-TATCACACCAGATATAGAATGATATCATAGAA
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1079339 14 +   1425656 AAA-TATTCCATCA---------------------A
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         36633 14 +     78940 AAA-TATTGCATCA---------------------A
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  124990 13 +    145789 A-A-AGTTACATCA---------------------G
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  36791 13 +     62360 A-A-AGTTATATCA---------------------G
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7224343 14 -   7562323 aaa-tattgCACCA---------------------A
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              57180 14 -     66828 AAA-TATCTCACCA---------------------A
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141875961 13 + 163896628 A-A-TACTACACCA---------------------C
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      307842 35 -    505867 AAA-TATCGTACCTGATATAGAATGATATCATAGAA
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                         407 14 -     53940 A-CATTTTGTACCA---------------------A
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18008380 14 -  38779656 A-CATTTTGTACCA---------------------A
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134076898 14 - 275406953 aaa-tattgcatcA---------------------A
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      78112 14 +    140051 AAA-TATTGCATCA---------------------A
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.AJFE02002857.1                                  47 14 -      1091 A-AATTTTGCACCC---------------------A
i Pan_paniscus.AJFE02002857.1                           n 26 C 0
s Pan_troglodytes.KZ622857.1                               327233 14 +    772158 A-AATTTTGCACCC---------------------A
i Pan_troglodytes.KZ622857.1                            I 521 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  33970 35 +    295523 AAA-CATTGCACCAGATATAGAATGATAACACAGAA
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3637706 35 +  18214204 AAA-CATTGCACCAGATATAGAATGATAACACAGAA
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5027379 35 -   6340057 AAA-CATTGCACCAGATATAGAATGATAACACAGAA
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1065758 14 -   1292953 aaa-tattgcatcA---------------------A
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188155974 14 - 188283584 A-AATTTTGCACCC---------------------A
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             4290 14 +      5367 A-AATTTTGCACCC---------------------A
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47513361 14 +  47705337 A-AATTTTGCACCC---------------------A
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 67338 14 -    104429 A-AATTTTGCACCC---------------------A
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    5871 14 +     14967 A-AATTTTGCACCC---------------------A
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 1731 14 -      7628 A-AATTTTGCACCC---------------------A
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    115419 35 -    135482 ACA-TATTGCACCAGATATAGAATGATATCACAGAA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           5095 14 -     23713 A-AAAATTGTACCA---------------------A
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            24404 14 -     27972 A-AAATTTGTACCA---------------------A
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      44248 12 -     45160 A---ATTTTTATAG---------------------A
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4950028 13 -   8017169 A-A-AGTTACATCA---------------------G
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    12135 13 -     36578 A-C-ATGTGCATTG---------------------G
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            120950 14 -    122454 AAA-TATTGCACCA---------------------A
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1987485                           1759 14 -      5908 A-AATTTTGTACCC---------------------G
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       2383 14 -     17985 A-AATTTTGTACCC---------------------G
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            1750 14 +      7694 A-AATTTTGTACCC---------------------G
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26740228 14 +  26888534 A-AATTTTGTACCC---------------------G
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            97109 14 +    112873 AAA-TATTGCACCA---------------------A
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             43358 14 -     61926 A-AATTTTGTACCC---------------------G
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        24789 14 +     78826 A-AATTTTGTACCC---------------------G
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              8738 14 -     15800 A-AATTTTGTACCC---------------------G
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        11936 14 -     16101 A-AATTTTGTACCC---------------------G
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          5245 14 +      9673 A-AATTTTGTACCC---------------------G
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13474241 14 -  19735023 A-AATTTTGTACCC---------------------G
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           13147 14 -     31692 A-AATTTTGTACCC---------------------G
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           5030 14 +     21690 AAA-TATTGCACCA---------------------G
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       22588 14 +     44506 A-AATTTTGTACTC---------------------G
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        22800 14 +     67491 A-AATTTTGTACTC---------------------G
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      13039 14 -     98129 A-AATTTTGTACTC---------------------G
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     22639 14 +    147771 A-AATTTTGTACTC---------------------G
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        22894 14 -     23762 A-AATTTTGTACTC---------------------G
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          3360 14 -     55515 A-AATTTTGTACTC---------------------G
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         22713 14 +    152463 A-AATTTTGTACTC---------------------G
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                        430 14 -    119457 A-AATTTTGTACTC---------------------G
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         12435 14 +    134592 A-AATTTTGTACTC---------------------G
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          23023 14 -     75465 A-AATTTTGTACTC---------------------G
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              186907 14 -    373494 A-AATTTTGCACCT---------------------G
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19807555 14 +  19899266 A-AATTTTGCACCT---------------------G
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               5485 14 -     15069 A-AATTTTGCACCC---------------------G
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              5619 14 +     14865 A-AATTTTGCACCC---------------------G
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                1276 14 -      9567 AAA-TATTGCATCA---------------------A
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6848276 14 +  12164890 a-aatttTGTACCA---------------------A
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coronatus.k141_1353159                         3333 14 +     11805 A-AAATTTATACCA---------------------A
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           42677 12 +     52369 A-A--TTTATACCA---------------------A
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         35065 12 -     44753 A-A--TTTGTACCA---------------------A
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            16987 12 +     27322 A-A--TTTGTACCA---------------------A
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       16623 12 -     53241 A-A--TTTGTACCA---------------------A
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         38886 14 -     48185 A-AAATTTGTACCA---------------------A
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           33954 13 +     77221 A-A-CAGTACATCA---------------------A
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            3506 14 -     27784 aaa-tattgcatcA---------------------C
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        246287 35 -    344369 AAA-TATCATACCAGATATAGAATGATACCATAGAA
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13245615 14 -  17261082 AAA-TGTTGTGCCA---------------------G
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             603565 14 -   3946241 AAA-TGTTGTGCCA---------------------G
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131533964 35 - 161321710 AAA-CATTGCACCAGATATAGAATGATAACACAGAA
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             29603 14 +     56732 A-AATTTTGCACCC---------------------G
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6806094 14 +   6970761 A-AATTTTGCACCC---------------------G
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             5488 14 +     18040 A-AATTTTGCACCC---------------------G
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                15416 14 +     68503 AAA-TATTGCATCA---------------------G
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13915245 13 +  90463843 A-A-AATTGCATCA---------------------A
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1787451 14 +   2252614 aaa-tattgtaccC---------------------G
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_1391695                           1716 14 -      1866 A-AATTTTGCACCC---------------------G
i Rhinopithecus_bieti.k119_1391695                      C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206377373 14 - 206558726 A-AATTTTGCACCC---------------------G
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44856273 14 -  45163003 A-AATTTTGCACCC---------------------G
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                18942 14 +    109198 AAA-TGTTGTGCCA---------------------G
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       7578 14 +     12214 AAG-TACTGCATCA---------------------A
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15672454 14 -  43202129 A-AATTTTGTACCT---------------------G
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        4371 14 +     34089 A-AATTTTGTACCT---------------------G
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              4312 14 -     60842 A-AATTTTGTACCT---------------------G
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              4407 14 +     67014 A-AATTTTGTACCT---------------------G
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              4385 14 +     60816 A-AATTTTGTACCT---------------------G
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 4322 14 -     76454 A-AATTTTGTACCT---------------------G
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17341047 14 -  30362882 A-AATTTTGTGCCC---------------------A
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         20406 14 -     62485 A-AATTTTGTGCCC---------------------A
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   31932 12 -    114521 AAA---TTGCACCA---------------------G
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        3100 14 +     15331 A-AATTTTGCACCC---------------------G
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       8497 14 +     20762 A-AATTTTGCACCC---------------------G
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         118499 14 +    130994 A-AATTTTGCACCC---------------------G
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           37286 14 +     46263 A-AATTTTGCACCC---------------------G
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     30400 14 +     42640 A-AATTTTGCACCC---------------------G
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        13444 14 +     30600 A-AATTTTGCACCC---------------------G
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   99981  7 -    120886 A-A-AGTTA---------------------------
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            18512 14 +    739146 AAA-TATTGTACCA---------------------A
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2239437 13 +   2842873 a-a-aatgacatCA---------------------A
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             234408 35 -    276980 AAA-TATCATACCAGATATAGAATGATATCATAGAA
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            27206 30 +     62062 ------TTGCAGCAGATATAGAATGATGTCACAGAA
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189271491 14 + 218635234 aaa-tattacaacG---------------------A
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        14658 14 -  13920577 A-AATTTTGCACCT---------------------G
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               5677 14 -      6213 AAA-TATTCCACCA---------------------A
i Tadarida_brasiliensis.TadBra_scaffold_145589          I 19 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               14352 14 +     45698 AAA-TATTGCACCA---------------------A
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      806570 14 +   1148477 GAA-TATTGCACCA---------------------g
i Tapirus_indicus.TapInd_scaffold_176                   C 0 I 204
s Tapirus_terrestris.TapTer_scaffold_14939                  57261 14 +     99546 GAA-TATTGCACTA---------------------g
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 I 208
s Tarsius_lariang.k141_609102                               26185 14 +     42269 A-AATCTTGCAACA---------------------A
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               59501 14 +     65473 A-AATCTTGCAACA---------------------A
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194007501 14 - 194193292 A-AATTTTGCACCC---------------------A
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  5185 14 +      6782 AAA-TATTGCACCA---------------------A
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  135497 12 -    259118 --A-TATTGTGCCA---------------------C
i Tonatia_saurophila.TonSau_scaffold_3334               I 1 C 0
s Trachypithecus_auratus.k141_738098                        26604 14 +     38948 A-AATTTTGCACCC---------------------G
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   20333 14 -     32910 A-AATTTTGCACCC---------------------G
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      1721 14 -     12939 A-AATTTTGCACCC---------------------G
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       1656 14 -     14244 A-AATTTTGCACCC---------------------G
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           43054 14 -     54611 A-AATTTTGCACCC---------------------G
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                         860 14 -     11566 A-AATTTTGCACCC---------------------G
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     3032 14 -     15592 A-AATTTTGCACCC---------------------G
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          1689 14 +     14371 A-AATTTTGCACCC---------------------G
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  51441 14 +     51589 A-AATTTTGCACCC---------------------G
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       14622 14 +     14732 A-AATTTTGCACCC---------------------G
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       5093 14 -     28054 A-AATTTTGCACCC---------------------G
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44659893 14 -  44834318 A-AATTTTGCACCC---------------------G
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       2197 14 +     13828 A-AATTTTGCACCC---------------------G
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   4805 14 +     90398 AAA-TATTGCACCA---------------------A
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16084541 14 +  31416278 AAA-TACTGCACCA---------------------A
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2792553 14 -   3938065 ATA-TTGTATGCAA---------------------A
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    4761 14 +     13056 ATA-TTGTATGCAA---------------------A
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69313060 14 -  96451834 aaa-tattgCACCA---------------------A
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                    968  7 +     10241 --------ACACAA---------------------A
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6514425 35 +  28682327 AAA-TATCGCACCAGATATAGAATGATATCATAGAA
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  4979 13 -     20643 A-A-TTTTGTACCA---------------------A
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             24520 13 -     33872 A-A-TTTTGTACCA---------------------A
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1524301 14 -   2331223 AAA-CATAGCACCA---------------------G
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                137935 35 -    281493 AAA-TATCGTACCTGATATAGAATGATATCATAGAA
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       126555 13 -    134049 A-A-ATCCACATCA---------------------A
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        213903 35 -    227762 AAA-TATCACACCAGATATAGAATGATATCATAGAA
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     14642 10 -     20485 -----GTTGCATCC---------------------A
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           6552 14 -      8775 AAC-TATTGCACCA---------------------A
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             38964  0 -     47444 C
e Sorex_araneus.JH798170.1                               17750754 3364 -  27805282 I
e Erinaceus_europaeus.JH835290.1                         11534163  4 +  16010500 I
e Jaculus_jaculus.JH725517.1                              8565562  0 +  11848649 C
e Hylobates_pileatus_a.tarseq_592                             33391 319 -     60944 I
e Allactaga_bullata.AllBul_scaffold_70162                   16551  0 -     22067 C
e Propithecus_coquerelli.NW_012147997.1                    667273 6500 -   2312742 I
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               11519  9 +    209709 TTG---T----------------ATAGA
s Acinonyx_jubatus.LLWD01000356.1                         2033661 12 +   3721120 TGa---t-------------tttattaa
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    112268 12 -    189883 TAG---CT----T-C--------ACAGC
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 I 13
s Ailuropoda_melanoleuca.LNAT01000321.1                  10656971 12 +  23371972 TGA---TTGC-------------ATTTA
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7094315 12 -  16596857 CAG---TTGC-------------ATTCA
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   16551  9 -     22067 ------TT--AC-----------AAAGA
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   1007 12 -     60446 TCG---TTG---T----------ATGGA
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         1730 12 -     29318 TCG---TTG---T----------ATGGA
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                          665 12 +     38766 TCG---TTG---T----------ATGGA
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          1624 12 -     80423 TCG---TTG---T----------ATGGA
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             9922 12 -     18050 TCA---TTG---T----------ATAGA
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                 11015 12 -     11521 TCA---TTG---T----------ATAGA
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                             10599 12 -     21359 TCA---TTG---T----------ATAGA
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                 214 12 +      2129 TCA---TTG---T----------ATAGA
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          9898 12 -     10438 TCA---TTG---T----------ATAGA
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            6554 12 +      7047 TCA---TTG---T----------ATAGA
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             9834 12 +     10410 TCA---TTG---T----------ATAGA
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            3642 12 -      4927 TCA---TTG---T----------ATAGA
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3519770 12 +   4113121 TGG---CTG---T----------ATTGT
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      389968 12 -    631301 TGG---TTG---T----------GTGGA
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            30354 12 +     33004 TGG---CTG---T----------ATTGT
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 62284 12 +     78111 TCA---TTG---T----------ATAGA
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            5225 12 +     22701 TCA---TTG---T----------ATAGA
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5749182 12 +   9889416 TCA---TTG---T----------ATAGA
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             5769 12 -    104377 TCA---TTG---T----------ATAGA
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               5771 12 +     23246 TCA---TTG---T----------ATAGA
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     3376 12 +      5067 TGG---TTGC-------------GTAGA
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 I 6
s Arctocebus_calabarensis.k141_587554                         713 12 +      9265 AGG---TT----T---T------ATAGA
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 8379 12 -     29036 TGG---TTG---T----------GTGGA
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 I 5
s Ateles_geoffroyi_b.tarseq_2582                             9539029 12 +  39197703 TCA---TTG---T----------ATAGA
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             60302 12 +     85812 TCA---TTG---T----------ATAGA
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                11314 12 +     89302 TCA---TTG---T----------ATAGA
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             15817 12 -     58268 TCA---TTG---T----------ATAGA
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             63810 12 +    119057 TCA---TTG---T----------ATAGA
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               5779 12 -     25888 TCA---TTG---T----------ATAGA
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 6431 12 -     16375 TGG---TTGC-------------ATAGA
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                                 51 12 +      6337 TGG---TTGC-------------ATAGA
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26379794 12 +  51448160 TGG---CTGC-------------Actga
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        5025 12 -     13118 TGG---CTGC-------------Actga
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   42833 12 -     72089 TGG---CTG---T----------ATTGT
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6559507 12 +   6870073 TGG---CTG---T----------ATTGT
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138139611 12 - 161108492 TGG---CTG---T----------ATTGT
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     572148 12 -    998990 TGG---CTG---T----------ATTGT
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136295344 12 - 158972876 TGG---CTG---T----------ATTGT
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1232427 12 -   1914593 TGG---CTG---T----------ATTAT
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               113664 12 -    171031 TCA---TTG---T----------ATAGA
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 12695 12 +    125063 TCA---TTG---T----------ATAGA
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                14740 12 -    216513 TCA---TTG---T----------ATAGA
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        7280 12 -    134917 TCA---TTG---T----------ATAGA
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3219211 12 -   8989139 TGA---TT--AC-----------ATTGA
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           396913 12 -  15254737 TGA---TT--AC-----------ATTGA
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2972648 12 +   6889770 TGA---TT--AC-----------ATTGA
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11519130 12 +  39901454 TGA---TTGC-------------ATTTA
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   14155 12 +     87036 TGA---TTGC-------------ATTTA
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11265797 12 -  35597290 TGA---TT-------------gcattta
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11088331 12 +  39895921 TGA---TT-------------gcattta
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16455346 12 -  44759192 TGA---TT-------------gcattta
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21324846 12 + 157394656 TGG---CTG---T----------ATTGT
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135706073 12 - 157403528 TGG---CTG---T----------ATTGT
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          308717 11 +    345090 TGC---T---A-T----------ACAGA
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               59169 12 +     67245 TGG---TTG---T----------GTGGA
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   30377 12 +     33760 TGG---TTG---T----------ATAGC
i Castor_canadensis.CasCan_scaffold_47037               C 0 I 16
s Catagonus_wagneri.CatWag_scaffold_1305                   158520 25 -    276539 TGG---TTGCACTACATGACTGCACTGA
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15786258 12 -  24422027 TAG---T-G--------G-C---ATAGA
i Cavia_aperea.AVPZ01000278.1                           C 0 I 7
s Cavia_porcellus.DS562889.1                             15798193 12 -  24440124 TAG---T-G--------G-C---ATAGA
i Cavia_porcellus.DS562889.1                            C 0 I 7
s Cavia_tschudii.CavTsc_scaffold_488                       176384 12 +    436027 TAG---T-G--------G-C---ATAGA
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 I 7
s Cebus_albifrons.Contig22                               18890517 12 -  29618158 TCA---TTG---T----------ATAGA
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 8061 12 -     26817 TCA---TTG---T----------ATAGA
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                12301 12 +     25043 TCA---TTG---T----------ATAGA
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         7751 12 +     21754 TGC---TT--A-T----------ACAGA
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4363532  5 +   7569818 -----------------------ataga
i Ceratotherium_simum.JH767818.1                        I 6 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         3289  5 -      9338 -----------------------ATAGA
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    I 6 C 0
s Cercocebus_atys.KQ010443.1                              6554952 12 +   6739814 TCG---TTG---T----------ATGGA
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      26429 12 +     60454 TCG---TTG---T----------ATGGA
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          1634 12 -     21101 TCG---TTG---T----------ATGGA
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         58944 12 -    107033 TCG---TTG---T----------ATGGA
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        1836 12 -     17608 TCG---TTG---T----------ATGGA
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          29331 12 +     30494 TCG---TTG---T----------ATGGA
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          58177 12 -     59240 TCG---TTG---T----------ATGGA
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          1878 12 +     16677 TCG---TTG---T----------ATGGA
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           24036 12 +     35983 TCG---TTGC-------------ATGGA
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11990564 12 +  12117833 TCA---TTG---T----------ATGGA
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46477322 12 +  46592721 TCG---TTGC-------------ATGGA
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      40873 12 -     45581 TCG---TTG---T----------ATGGA
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       1879 12 +     35577 TCA---TTG---T----------ATGGA
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        1655 12 -     25661 TCG---TTG---T----------ATGGA
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        1633 12 -     17744 TCG---TTG---T----------ATGGA
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        21249 12 +     37128 TCG---TTG---T----------ATGGA
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           2450 12 -      6963 AAT---TT----T---T------ATAGA
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           58717 12 -     68416 TGG---TTGC-------------ATAGA
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            7761 12 +     13308 TGG---TTGC-------------ATAGA
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             5318 12 -     18223 TAA---TTG---T----------ATAAA
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             22341 12 +     25473 TAA---TTG---T----------ATAAA
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           41376 12 +     57117 TAA---TTG---T----------ATAAA
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          46055 12 +     54541 TAA---TTG---T----------ATAAA
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15961423 12 +  43084221 CAG---TTGC-------------ACAGA
i Chinchilla_lanigera.JH721867.1                        C 0 I 6
s Chiropotes_israelita.k141_1189915                         70871 12 +    196370 TCA---TTG---T----------ATAGA
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          15051 12 +     40510 TCA---TTG---T----------ATAGA
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15138795 12 -  15256731 TCG---TTG---T----------ATGGA
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      33842 12 -     53260 TCG---TTG---T----------ATGGA
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101144406 12 + 101219884 TCG---TTG---T----------atgga
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                16138 12 -     21363 AAG---TTGC-------------ACCGC
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           761445 12 +    964067 AAG---TTGC-------------ACCGC
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_3549804               60 12 -       354 TGT---AT--AC-----------AAAGA
i Chrysochloris_asiatica.ChrAsi_scaffold_3549804        C 0 C 0
s Colobus_angolensis.KN985967.1                          10886172 12 +  10971483 TCG---TTG---T----------atgga
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147664336 12 + 156195979 TCG---TTG---T----------ATGGA
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            16321 12 +     23629 TCG---TTG---T----------ATGGA
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60613263 11 +  78930452 TGG---TT--A-T----------ATGG-
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         39353 12 -     40477 TGG---TTGC-------------ATAGA
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 278222 12 -    399297 TAG---CT----T-C--------ATAGA
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 I 13
s Cricetulus_griseus.LT883672.1                          53028904 12 +  72327488 TAG---TT----T-C--------ACAGA
i Cricetulus_griseus.LT883672.1                         C 0 I 13
s Crocidura_indochinensis.CroInd_scaffold_88140              1832  4 +     11655 ------------------------AAAA
i Crocidura_indochinensis.CroInd_scaffold_88140         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            51672 12 -     70449 TGA---TT----T---T------ATTAA
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  207822 12 -    956709 CAG---T-G-AC-----------AAAGA
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 I 6
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 30407 12 -     67205 TGG---TTGC-------------ACAAA
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 I 6
s Cuniculus_paca.CunPac_flattened_line_16637                17443 12 +     26546 TAG---TTGC-------------ACAGA
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 I 7
s Dasyprocta_punctata.DasPun_flattened_line_634             58528 12 -    236241 TAC---TTGC-------------ACAGA
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 I 8
s Dasypus_novemcinctus.JH568778.1                          183325 12 -   6883506 AAG---TTGC-------------ataga
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16844576 12 +  31942871 TGG---TTGC-------------ATAGA
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80036472 12 -  96802777 TGG---CTGC-------------ACTGA
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18698444 12 -  18957592 TGG---TTG---T----------GTGGA
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 322181  5 +    993696 -----------------------acaga
i Dicerorhinus_sumatrensis.PEKH010003161.1              I 6 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   2834  5 +    151128 -----------------------ATAGA
i Diceros_bicornis.DicBicMic_scaffold_9545              I 6 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   156680 12 +    228994 TAG---TTGC-------------ACAGA
i Dinomys_branickii.DinBra_scaffold_1996                C 0 I 6
s Dipodomys_ordii.KN672545.1                              3656011  1 +   4240102 A---------------------------
i Dipodomys_ordii.KN672545.1                            C 0 I 15
s Dipodomys_stephensi.DipSte_scaffold_44365                 27644  1 +     28912 A---------------------------
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 I 15
s Dolichotis_patagonum.DolPat_scaffold_14102                35778 12 -     73477 TAG---T-G--------G-C---ATAGA
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 I 8
s Echinops_telfairi.JH980316.1                           22998178 12 -  44670279 TGC---AT--AC-----------Ataga
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 11877 12 +     24177 TAG---TTGC-------------ATAGA
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1491122 12 +   1727528 TGG---CTG---T----------ATTGT
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7815377 12 +  15467074 AGC---TT--AC-----------ATCAA
i Elephantulus_edwardii.JH947210.1                      C 0 I 223
s Ellobius_lutescens.LOEQ01003611.1                        239451 12 -    369425 TAC---TT----T-C--------AAAGA
i Ellobius_lutescens.LOEQ01003611.1                     C 0 I 13
s Ellobius_talpinus.LOJH01090055.1                           6564 12 -      7838 TAC---TT----T-C--------AAAGA
i Ellobius_talpinus.LOJH01090055.1                      C 0 I 13
s Enhydra_lutris.KZ291749.1                              85871834 12 +  99434291 TGA---TTGC-------------ATTTA
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4703823 12 +   6522550 TGG---TTGC-------------ATAGA
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5852635  5 -   7175178 -----------------------ATAGA
i Equus_asinus.JREZ01000062.1                           I 6 C 0
s Equus_caballus.CM000402.2                              13351138  5 +  41866177 -----------------------ATAGA
i Equus_caballus.CM000402.2                             I 6 C 0
s Equus_przewalskii.ATBW01073585.1                          12628  5 +     92910 -----------------------ATAGA
i Equus_przewalskii.ATBW01073585.1                      I 6 C 0
s Erythrocebus_patas.Contig8                             48770973 12 -  48907691 TCG---TTG---T----------ATGGA
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          314678 12 +    330699 TGG---CTGC-------------ACTGA
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             61132 12 +     89355 TGG---CTGC-------------ACTGA
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              4769 12 +     13586 TGG---TTGC-------------ACAGA
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               4703 12 -      6809 TGG---TTGC-------------ACAGA
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            11176 12 +     36558 TGG---TTGC-------------ACAGA
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             7498 12 +     60246 TGG---TTGC-------------ACAGA
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                10976 12 +    109717 TGG---TTGC-------------ACAGA
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               15360 12 +     16540 TGG---TTGC-------------ACAGA
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                15634 12 +     27497 TGG---TTGC-------------ACAGA
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           18090 12 +     26808 TGG---TTGC-------------ACAGA
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                32826 12 +     46535 TGG---TTGC-------------ACAGA
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              15548 12 -     29447 TGG---TTGC-------------ACAGA
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129892620 12 - 159252932 TGA---TT----T---T------ATTAA
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129279707 12 - 158578461 TGa---t-------------tttattaa
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 20852 12 +     52776 TGA---TT----T---T------ATTAA
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Galago_moholi.ctg555                                     210601 12 -    847004 AGG---TT----T-C--------ATAGA
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           12980 12 -     43889 AGG---TT----T-C--------ATAGA
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          10055 12 +     27357 AGG---TTGC-------------ATAGA
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               155942 12 +    324696 TGG---CTGC-------------TTAGA
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    180919 12 -    189561 TGA---CTG---T----------ATTGT
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           12754 12 -     18683 TGG---TTGC-------------ATAAA
i Glis_glis.GliGli_scaffold_79770                       C 0 I 6
s Gorilla_beringei.k141_111300                               5034 12 -     14630 TTG---TTG---T----------ATAGA
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119652133 12 - 195582420 TTG---TTG-------------tataga
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   77299 12 +    118900 TAG---TTGC-------------ATAGA
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 I 6
s Hapalemur_alaotrensis.k141_1280836                         1548 12 +     10286 TGG---TTGC-------------ACAGA
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                               25 12 -     11661 TGG---TTGC-------------ACAGA
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             5354 12 +     56096 TGG---TTGC-------------ACAGA
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        28604 12 -     42470 TGG---TTGC-------------ACAGA
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        45227 12 -     54384 TGG---TTGC-------------ACAGA
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              16880 11 +     53719 TT----TT----T---T------ATTAA
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                27118 12 -     91191 TGG---CTG---T----------ATTGT
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2550759 12 +  31725842 TGG---TTGC-------------ACAGA
i Heterocephalus_glaber.JH602058.1                      C 0 I 8
s Heterohyrax_brucei.HetBruBak_scaffold_25354               60199 12 +     73687 TGG---TT--A-T----------GCACA
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              146766 12 +    277961 TGG---CTGC-------------ACTGA
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      278045 12 -    477199 TGG---TTGC-------------ATAGA
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              7192 12 -      9143 TGG---TT--AC-----------ATAGA
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      4441 12 -   7690867 TTG---TTG---T----------ATAGA
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 16952 12 -     67322 TGA---TT----T---T------ATTAA
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           18640 12 -    119109 TAG---T-G--------G-C---ACAAA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 I 8
s Hylobates_abbotti.k141_493872                              4865 12 +      5897 TTG---TTG---T----------ATAGA
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_624065                               1731 12 +      2112 TTG---TTG---T----------ATAGA
i Hylobates_agilis.k141_624065                          C 0 C 0
s Hylobates_klossii.k141_466549                             11305 12 +     11537 TTG---TTG---T----------ATAGA
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14624412 12 -  25970782 TTG---TTG---T----------ATAGA
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            1666 12 -      2977 TTG---TTG---T----------ATAGA
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     5815 12 +     22540 TGG---TT-C-C-----------ACAGA
i Hystrix_cristata.HysCri_scaffold_50788                C 0 I 8
s Ictidomys_tridecemlineatus.JH393315.1                   7125532 12 +  13083262 TGA---TTGC-------------ataga
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 I 6
s Indri_indri.k141_4418183                                   1197 12 -      1457 TGG---TTGC-------------ATAGA
i Indri_indri.k141_4418183                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               8670 12 +     17520 TGG---CTGC-------------ACTGA
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8565562  9 +  11848649 ------AT--AC-----------AAAGA
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               23288 12 +     37189 TGG---CTGC-------------ACTGA
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          49899 12 -    147782 TCA---TTG---T----------ATAGA
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   113914 12 -    115756 TGG---TTGC-------------ATAGA
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258406909 12 - 285822530 TGG---TTGC-------------ACAGA
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        23660 12 +     39228 TGG---TTG---T----------ACAGA
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            53044 12 +     63517 TGG---TTG---T----------ACAGA
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        78303 12 +    116806 TGG---TTG---T----------ACAGA
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     31299 12 -     33031 TGG---TTG---T----------ACAGA
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3085642 12 -   3498232 TGA---TTGC-------------ATTTA
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    12936 10 +     22452 -A----TTGC-------------TTGGA
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            135625 12 +   3060487 TGG---CTGC-------------ACTGA
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19248038 12 +  19376315 TCG---TTG---T----------ATGGA
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           10361 12 +     84689 AGT---T--CAC-----------ATAGA
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3778110 12 +   6799190 AGT---T--CAC-----------ATAGA
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20593886 12 -  62548349 TGG---TT--A-T----------ATAGA
i Loxodonta_africana.GL010040.1                         C 0 I 13
s Lycaon_pictus.CM007556.1                               11087787 12 +  39895028 TGA---TT-------------gcattta
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             19781 12 +     74745 TCG---TTG---T----------ATGGA
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12706237 12 +  12821369 TCG---TTG---T----------ATGGA
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                1882 12 -      3136 TCG---TTG---T----------ATGGA
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           46699 12 +     63263 TCG---TTG---T----------ATGGA
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                 1402 12 -      2568 TCG---TTG---T----------ATGGA
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 1988 12 -      7381 TCG---TTG---T----------ATGGA
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  45206 12 -     79256 TCG---TTG---T----------ATGGA
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196035314 12 + 196197964 TCG---TTG---T----------ATGGA
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11445482 12 +  11645122 TCG---TTG---T----------ATGGA
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   4153 12 -     46448 TCG---TTG---T----------ATGGA
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                1825 12 -     13212 TCG---TTG---T----------ATGGA
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 15506 12 -     55006 TCG---TTG---T----------ATGGA
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43840623 12 +  43892939 TCG---TTG---T----------ATGGA
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               16792 12 -     24607 TCG---TTG---T----------ATGGA
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               4158 12 -     27140 TCG---TTG---T----------ATGGA
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                701250 12 +    802869 TAG---TTGC-------------ATAGA
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43437200 12 -  43563597 TCG---TTG---T----------ATGGA
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4450026 12 -   4543643 TCG---TTG---T----------ATGGA
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            145280 12 +    252755 CAG---TT--AC-----------ATAGA
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             35357 12 +     58827 CAG---TT--AC-----------ATAGA
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36873373 12 +  64221397 TGA---TTGC-------------ataga
i Marmota_marmota.CZRN01000005.1                        C 0 I 6
s Megaderma_lyra.MegLyr_scaffold_3562                       64068 12 -    234502 AGG---TTGC-------------ATAGA
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433              644 12 -     87323 TGA---TTGC-------------ATTTA
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               12415  8 +     15977 TAC---TT----T-C--------A----
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 I 10
s Mesocricetus_auratus.KB708139.1                         1046613 12 -  26018355 TAG---T-------------tccacaga
i Mesocricetus_auratus.KB708139.1                       C 0 I 13
s Microcebus_murinus.CM007691.1                          16509932 12 +  47401472 TGG---TTGC-------------ataga
i Microcebus_murinus.CM007691.1                         C 0 I 12
s Microgale_talazaci.MicTal_scaffold_34660                  34154 12 -     48017 TGC---ATGC-------------ATAGA
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               22351 15 -     32043 TGATTGTTG---T----------GTGGA
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22819750 12 -  98408828 TAC---TT----T-C--------AAAGA
i Microtus_ochrogaster.CM001673.1                       C 0 I 13
s Miniopterus_natalensis.LDJU01000022.1                   8209348 12 +  10048721 TGG---TTGC-------------ATAGA
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            34002 12 +     45743 TGG---TTGC-------------ATAGA
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         1753 12 +     29742 TCG---TTG---T----------ATGGA
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        11155 12 -    104932 TGA---TTGC-------------ATTTA
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     5318 12 +      8497 TGG---TTGC-------------ATAGA
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 146060 12 +    154973 TGG---CTGC-------------ACTGA
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                160876 12 +    265003 GGG---TTGC-------------ATGGT
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                   664 12 -     19904 TGG---CTG---T----------ACTGT
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  144576 11 -    168139 TTA---TT----T---T------ATTA-
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          19206 12 -    100666 TTG---TTGC-------------ATAGA
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70766254 12 +  92629107 TAG---TT----T-C--------ACAAA
i Mus_caroli.LT608236.1                                 C 0 I 13
s Mus_musculus.chr16                                     75489313 12 +  98207768 TAG---TT----T-C--------ACAAA
i Mus_musculus.chr16                                    C 0 I 13
s Mus_pahari.LT608305.1                                  67555541 12 +  89017189 TAG---TT----T-C--------ACAGA
i Mus_pahari.LT608305.1                                 C 0 I 13
s Mus_spretus.CM004110.1                                 74330491 12 +  97876770 TAG---TT----T-C--------ACAAA
i Mus_spretus.CM004110.1                                C 0 I 13
s Muscardinus_avellanarius.MusAve_scaffold_9643             11537 12 +     98495 TGG---TTGC-------------ATAAA
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 I 6
s Mustela_putorius.JH417978.1                             4424014 12 -  28371801 TGA---TTGC-------------ATTTA
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     89687 12 -    117718 TGC---CTGC-------------ACAAG
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 I 8
s Myotis_brandtii.KE161952.1                               967504 12 +   8389877 TGG---TTGC-------------ATAGA
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5019181 12 +   6462685 TGG---TTGC-------------ATAGA
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3465085 12 -   3747815 TGG---TTGC-------------ATAGA
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        10299 12 +     66751 TGG---TTGC-------------ATAGA
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             4705 11 -      8794 -AG---TTGC-------------ACAGA
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            118107 12 +    362372 TAG---TTGC-------------ATAGA
i Nannospalax_galili.KL201303.1                         C 0 I 264
s Nasalis_larvatus.k141_153429                               8254 12 +     48152 TCG---TTG---T----------ATGGA
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4484547 12 -  14209539 TGA---TTGC-------------ATTTA
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3950675 12 -   4490290 TGG---CTGC-------------ACTGA
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  48966 12 +     94413 CGT---TTGC-------------ATGGA
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_220265                             176 12 +      1763 TTG---TTG---T----------ATAGA
i Nomascus_annamensis.k141_220265                       C 0 I 33
s Nomascus_concolor.k141_226614                               969 12 -      5092 TTG---TTG---T----------ATAGA
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_642452                            1752 12 +      2851 TTG---TTG---T----------ATAGA
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             24687 12 -  18771707 TTG---TTG---T----------ATAGA
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  2390 12 +      4512 TTG---TTG---T----------ATAGA
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                30592 12 +   3668941 TGA---TTGC-------------ATTTA
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65566796 12 -  95554990 AAG---T--CAC-----------ATAGA
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            3525 12 +      6470 AAG---T--CAC-----------ATAGA
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65669132 12 +  89412551 AAG---TT--AC-----------ATAGA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4995693 11 -  23139505 -AG---T-------------tgcacaaa
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3685241 12 +  10294119 TGG---t-------------tgcacaaa
i Octodon_degus.JH651621.1                              C 0 I 8
s Odobenus_rosmarus.KB229369.1                             679212 12 -   3126709 TGA---TTGC-------------ATTTA
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1079353 12 +   1425656 TGG---CTG---T----------ATTGT
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         36647 12 +     78940 TGA---CTG---T----------ATTGT
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  125003 12 +    145789 TAC---TT----T-C--------AAAGA
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 I 13
s Onychomys_torridus.OnyTor_scaffold_12578                  36804 12 +     62360 TAG---TT----T-C--------ACAGA
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 I 13
s Orcinus_orca.KB316965.1                                 7224357 12 -   7562323 TGG---CTGC-------------ACTGA
i Orcinus_orca.KB316965.1                               C 0 I 13
s Orycteropus_afer.OryAfe_flattened_line_13509              57194 12 -     66828 TTC---TT--AC-----------ATAAA
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 I 13
s Oryctolagus_cuniculus.CM000803.1                      141875974 10 + 163896628 -A----TTGC-------------TTGGA
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      307877 12 -    505867 TGA---TTGC-------------ATTTA
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                         421 12 -     53940 AGG---TT----T-C--------ATAGA
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18008394 12 -  38779656 AGG---TT----T-C--------ATAGA
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134076912 12 - 275406953 TGG---CTG---T----------ATTGT
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      78126 12 +    140051 TGG---CTG---T----------ATTGT
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.AJFE02002857.1                                  61 12 -      1091 TTG---TTG---T----------ataga
i Pan_paniscus.AJFE02002857.1                           C 0 I 106
s Pan_troglodytes.KZ622857.1                               327247 12 +    772158 TTG---TTG---T----------ataga
i Pan_troglodytes.KZ622857.1                            C 0 I 105
s Panthera_onca.PanOnc_flattened_line_1615                  34005 12 +    295523 TGA---TT----T---T------ATTAA
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3637741 12 +  18214204 TGA---TT----T---T------ATTAA
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5027414 12 -   6340057 TGa---t-------------tttattaa
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1065772 12 -   1292953 TGG---CTG---T----------ATTGT
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188155988 12 - 188283584 TCG---TTG---T----------atgga
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             4304 12 +      5367 TCG---TTG---T----------ATGGA
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47513375 12 +  47705337 TCG---TTG---T----------ATGGA
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 67352 12 -    104429 TCG---TTG---T----------ATGGA
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    5885 12 +     14967 TCG---TTG---T----------ATGGA
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 1745 12 -      7628 TCG---TTG---T----------ATGGA
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    115454 12 -    135482 TGA---TT----T---T------ATTAA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           5109 12 -     23713 AGG---TT----T-C--------ATAGA
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            24418 12 -     27972 AGG---TT----T-C--------ATAGA
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      44260  1 -     45160 A---------------------------
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 I 14
s Peromyscus_maniculatus.KI615518.1                       4950041 12 -   8017169 TAG---TT----T-C--------ATAGA
i Peromyscus_maniculatus.KI615518.1                     C 0 I 13
s Petromus_typicus.PetTyp_scaffold_33007                    12148 12 -     36578 TTG---TTGC-------------ACAAA
i Petromus_typicus.PetTyp_scaffold_33007                C 0 I 8
s Phocoena_phocoena.PhoPho_flattened_line_11948            120964 12 -    122454 TGG---CTGC-------------ACTGA
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1987485                           1773 12 -      5908 TCG---TTG---T----------ATGGA
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       2397 12 -     17985 TCG---TTG---T----------ATGGA
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            1764 12 +      7694 TCG---TTG---T----------ATGGA
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26740242 12 +  26888534 TCG---TTG---T----------atgga
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            97123 12 +    112873 TGG---TTGC-------------AAAGA
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             43372 12 -     61926 TCA---TTG---T----------ATAGA
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        24803 12 +     78826 TCA---TTG---T----------ATAGA
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              8752 12 -     15800 TCA---TTG---T----------ATAGA
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        11950 12 -     16101 TCA---TTG---T----------ATAGA
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          5259 12 +      9673 TCA---TTG---T----------ATAGA
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13474255 12 -  19735023 TCA---TTG---T----------ATAGA
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           13161 12 -     31692 TCA---TTG---T----------ATAGA
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           5044 12 +     21690 TGG---CTGC-------------ACTGA
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       22602 12 +     44506 TCA---TTG---T----------AGAGA
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        22814 12 +     67491 TCA---TTG---T----------AGAGA
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      13053 12 -     98129 TCA---TTG---T----------AGAGA
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     22653 12 +    147771 TCA---TTG---T----------AGAGA
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        22908 12 -     23762 TCA---TTG---T----------AGAGA
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          3374 12 -     55515 TCA---TTG---T----------AGAGA
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         22727 12 +    152463 TCA---TTG---T----------AGAGA
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                        444 12 -    119457 TCA---TTG---T----------AGAGA
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         12449 12 +    134592 TCA---TTG---T----------AGAGA
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          23037 12 -     75465 TCA---TTG---T----------AGAGA
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              186921 12 -    373494 TTG---TTG-------------tataga
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19807569 12 +  19899266 TTG---TTG---T----------ATAGA
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               5499 12 -     15069 TCG---TTG---T----------ATGGA
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              5633 12 +     14865 TCG---TTG---T----------ATGGA
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                1290 12 -      9567 TGG---TT--A-T----------GCACA
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6848290 12 +  12164890 TGG---TTGC-------------ACAGA
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coronatus.k141_1353159                         3347 12 +     11805 TGG---TTGC-------------ATAGA
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           42689 12 +     52369 TGG---TTGC-------------ATAGA
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         35077 10 -     44753 TGG---TTGC-------------AC--A
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            16999 12 +     27322 TGA---TTGC-------------ATAGA
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       16635 12 -     53241 TGG---TTGC-------------ATAGA
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         38900 12 -     48185 TGG---TTGC-------------ATAGA
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           33967  8 +     77221 TAC---TT----T-C--------A----
i Psammomys_obesus.NESX01026517.1                       C 0 I 10
s Pteronotus_parnellii.KE867983.1                            3520 12 -     27784 TGG---TTG-------------catgga
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        246322 12 -    344369 TGA---TTGC-------------ATTTA
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13245629 12 -  17261082 TAG---TT--AC-----------ATAGA
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             603579 12 -   3946241 TAG---TT--AC-----------ATAGA
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131533999 12 - 161321710 TGa---t-------------tttattaa
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             29617 12 +     56732 TCA---TTG---T----------ATGGA
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6806108 12 +   6970761 TCG---TTG---T----------ATGGA
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             5502 12 +     18040 TCG---TTG---T----------ATGGA
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                15430 12 +     68503 TGG---CTG---T----------ATTGT
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13915258 12 +  90463843 TGG---TT----T-C--------ACAGA
i Rattus_norvegicus.chr11                               C 0 I 13
s Rhinolophus_sinicus.LVEH01000179.1                      1787465 12 +   2252614 TGG---CTGC-------------GTAGA
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_1391695                           1730 12 -      1866 TCG---TTG---T----------ATGGA
i Rhinopithecus_bieti.k119_1391695                      C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206377387 12 - 206558726 TCA---TTG---T----------atgga
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44856287 12 -  45163003 TCG---TTG---T----------ATGGA
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                18956 12 +    109198 TAG---TT--AC-----------ATAGA
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       7592 12 +     12214 TGG---CTG---T----------ATTGT
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15672468 12 -  43202129 TCA---TTG---T----------ATAGA
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        4385 12 +     34089 TCA---TTG---T----------ATAGA
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              4326 12 -     60842 TCA---TTG---T----------ATAGA
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              4421 12 +     67014 TCA---TTG---T----------ATAGA
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              4399 12 +     60816 TCA---TTG---T----------ATAGA
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 4336 12 -     76454 TCA---TTG---T----------ATAGA
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17341061 12 -  30362882 TCA---TTG---T----------ATAGA
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         20420 12 -     62485 TCA---TTG---T----------ATAGA
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   31944 12 -    114521 TGG---TT----T---T------ATAGA
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        3114 12 +     15331 TCG---TTG---T----------ATGGA
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       8511 12 +     20762 TCG---TTG---T----------ACGGA
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         118513 12 +    130994 TCG---TTG---T----------ATGGA
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           37300 12 +     46263 TCG---TTG---T----------ATGGA
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     30414 12 +     42640 TCG---TTG---T----------ATGGA
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        13458 12 +     30600 TCG---TTG---T----------ATGGA
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                   99988 11 -    120886 -AG---TT----T---T------ACAGA
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 I 13
s Solenodon_paradoxus.SolPar_flattened_line_1012            18526 12 +    739146 TGG---TTGC-------------ATAGA
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2239450 12 +   2842873 TGA---TTGC-------------ATAGA
i Spermophilus_dauricus.KZ294190.1                      C 0 I 6
s Spilogale_gracilis.SpiGra_flattened_line_905             234443 12 -    276980 TGA---TTGC-------------ATTTA
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            27236 12 +     62062 TTA---TT----T---T------ATTAA
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189271505 12 + 218635234 TGG---TTGC-------------ACTGA
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        14672 12 -  13920577 TTG---TTG---T----------ATAGA
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               5691 12 -      6213 TGG---TTGC-------------ATAGA
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               14366 11 +     45698 -AG---TTGC-------------ACAGA
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      806788  5 +   1148477 -----------------------ATAGA
i Tapirus_indicus.TapInd_scaffold_176                   I 204 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  57483  5 +     99546 -----------------------ATAGA
i Tapirus_terrestris.TapTer_scaffold_14939              I 208 C 0
s Tarsius_lariang.k141_609102                               26199 12 +     42269 TGG---TT--A-T----------ACAGA
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               59515 12 +     65473 TGG---TT--A-T----------ACAGA
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194007515 12 - 194193292 TCA---TTG---T----------atgga
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  5199 12 +      6782 AAT---TTGC-------------ATAGA
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  135509 12 -    259118 TGC---TTG---T----------GTGGA
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        26618 12 +     38948 TCG---TTG---T----------ATGGA
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   20347 12 -     32910 TCG---TTG---T----------ATGGA
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      1735 12 -     12939 TCG---TTG---T----------ATGGA
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       1670 12 -     14244 TCG---TTG---T----------ATGGA
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           43068 12 -     54611 TCG---TTG---T----------ATGGA
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                         874 12 -     11566 TCG---TTG---T----------ATGGA
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     3046 12 -     15592 TCG---TTG---T----------ATGGA
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          1703 12 +     14371 TCG---TTG---T----------ATGGA
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  51455 12 +     51589 TCG---TTG---T----------ATGGA
i Trachypithecus_leucocephalus.k141_283605              C 0 C 0
s Trachypithecus_melamera.k141_238507                       14636 12 +     14732 TCG---TTG---T----------ATGGA
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       5107 12 -     28054 TCG---TTG---T----------ATGGA
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44659907 12 -  44834318 TCG---TTG---T----------ATGGA
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       2211 12 +     13828 TCG---TTG---T----------ATGGA
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   4819 12 +     90398 TGA---CTG---T----------ACTGT
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16084555 12 +  31416278 TGG---TT--AC-----------ATAGA
i Trichechus_manatus.JH594618.1                         C 0 I 13
s Tupaia_chinensis.KB320831.1                             2792567 12 -   3938065 TGG---TTGC-------------CGGAA
i Tupaia_chinensis.KB320831.1                           C 0 I 15
s Tupaia_tana.TupTan_flattened_line_68454                    4775 12 +     13056 TGG---TTGC-------------CTGAA
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69313074 12 -  96451834 TGG---CTGC-------------ACTGA
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                    975 12 +     10241 TAG---TTGC-------------ACAGA
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6514460 12 +  28682327 TGA---TTGC-------------ATTTA
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  4992 12 -     20643 TGG---TTGC-------------ACAGA
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             24533 12 -     33872 TGG---TTGC-------------ACAGA
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1524315 12 -   2331223 TGA---TT--AC-----------ATTGA
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                137970 12 -    281493 TGA---TTGC-------------ATTTA
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       126568 12 -    134049 TGG---TTGC-------------ATAGA
i Xerus_inauris.XerIna_scaffold_7898                    C 0 I 3
s Zalophus_californianus.ZalCal_flattened_line_4097        213938 12 -    227762 TGA---TTGC-------------ATTTA
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     14652 12 -     20485 TAG---AT--AC-----------AAAGA
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 I 22
s Ziphius_cavirostris.ZipCav_flattened_line_127025           6566 12 -      8775 TGG---CTGC-------------ACTGA
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             38964  0 -     47444 C
e Sorex_araneus.JH798170.1                               17750754 3364 -  27805282 I
e Erinaceus_europaeus.JH835290.1                         11534163  4 +  16010500 I
e Hylobates_pileatus_a.tarseq_592                             33391 319 -     60944 I
e Propithecus_coquerelli.NW_012147997.1                    667273 6500 -   2312742 I
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               11528 33 +    209709 A---------TG---A-T-------T----TTT---AAAAT--C----TCA----T-TCAATC-C---T--TC------A---G---A-A
s Acomys_cahirinus.AcoCah_scaffold_1625                    112293 16 -    189883 -------------------------------------------A----CAA----AAAT-----C---T--CC------A---G---T-A
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 13 C 0
s Acinonyx_jubatus.LLWD01000356.1                         2033673  9 +   3721120 a---------ca---a-t-------a----a-----at----------------------------------------------------
i Acinonyx_jubatus.LLWD01000356.1                       C 0 I 7
s Ailuropoda_melanoleuca.LNAT01000321.1                  10656983 15 +  23371972 A---------TG---A-T-------A----A-----AAGA-ATG----T-----------------------------------------
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 I 17
s Ailurus_fulgens.LNAC01000003.1                          7094327 15 -  16596857 A---------TG---A-T-------A----A-----AATA-ATG----T-----------------------------------------
i Ailurus_fulgens.LNAC01000003.1                        C 0 I 17
s Allactaga_bullata.AllBul_scaffold_70162                   16560 13 -     22067 ATAAGATCACTA---A--------------------------------------------------------------------------
i Allactaga_bullata.AllBul_scaffold_70162               C 0 I 24
s Allenopithecus_nigroviridis.k141_2469532                   1019 33 -     60446 A---------TG---A-T-------T----TTT---AAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         1742 33 -     29318 A---------TG---A-T-------T----TTT---TAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                          677 33 +     38766 A---------TG---A-T-------T----TTT---TAAAT--C----TCA----T-TCAAAC-C---C--CC------A---G---A-A
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          1636 33 -     80423 A---------TG---A-T-------T----TTT---TAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             9934 33 -     18050 A---------TG---C-T-------T----CTT---AAAAT--G----TCA----T-TTTATC-C---C--CC------A---G---A-A
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                 11027 33 -     11521 A---------TG---C-T-------T----CTT---AAAAT--G----TCA----T-TTTATC-C---C--TC------A---G---A-A
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                             10611 33 -     21359 A---------TG---C-T-------T----CTT---AAAAT--G----TCA----T-TTTATC-C---C--CC------A---G---A-A
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                 226 33 +      2129 A---------TG---C-T-------T----CTT---AAAAT--G----TCA----T-TTTATC-C---C--CC------A---G---A-A
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          9910 33 -     10438 A---------TG---C-T-------T----CTT---AAAAT--G----TCA----T-TTTATC-C---C--CC------A---G---A-A
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            6566 33 +      7047 A---------TG---C-T-------T----CTT---AAAAT--G----TCA----T-TTTATC-C---C--CC------A---G---A-A
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             9846 33 +     10410 A---------TG---C-T-------T----CTT---AAAAT--G----TCA----T-TTTATC-C---C--CC------A---G---A-A
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            3654 33 -      4927 A---------TG---C-T-------T----CTT---AAAAT--G----TCA----T-TTTATC-C---C--CC------A---G---A-A
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3519782 32 +   4113121 A---------CA---G-T-------A----A-----AAGT-GAG----TCA----G-ACAGct-c---c--ac------a---g---a-a
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      389980 31 -    631301 A---------TG---G-T-------A----A-----AAGA-ATG----TCA----G-TTAACT-T---C--C-------A---G---A-A
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            30366 32 +     33004 A---------CA---G-T-------A----A-----AAGT-GAG----TCA----G-ACAACT-C---C--AC------A---G---A-A
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 62296 33 +     78111 A---------TG---C-T-------T----CTT---AAAAT--G----TCA----T-TTTATC-C---C--CC------A---G---A-A
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            5237 33 +     22701 A---------TG---C-T-------T----CTT---AAAAT--G----TCA----T-TTTATC-C---C--CC------A---G---A-A
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5749194 33 +   9889416 A---------TG---c-t-------t----ctt---aaaat--g----tca----t-tttatc-c---c--cc------a---g---a-a
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             5781 33 -    104377 A---------TG---C-T-------T----CTT---AAAAT--G----TCA----T-TTTATC-C---C--CC------A---G---A-A
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               5783 33 +     23246 A---------TG---C-T-------T----CTT---AAAAT--G----TCA----T-TTTATC-C---C--CC------A---G---A-A
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     3394 16 +      5067 --------------------------------------------------A----A-TA-----TGAAT--CC-----AA---G---A-A
i Aplodontia_rufa.AprRuf_scaffold_156013                I 6 C 0
s Arctocebus_calabarensis.k141_587554                         725 28 +      9265 A---------TG---A-T-------A----A-----A--A---G----TCA----A-TTAATC-T---C--AT------A---T---A-A
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 8396 24 -     29036 -------------------------------------AGA-ATG----TCA----G-TTAACT-T---C--CA------A---G---A-A
i Artibeus_jamaicensis.ArtJam_scaffold_41619            I 5 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9539041 33 +  39197703 A---------TG---C-T-------T----CTT---AAAAT--G----TCA----T-TTTATC-C---C--CC------A---G---A-A
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             60314 33 +     85812 A---------TG---C-T-------T----CTT---AAAAT--G----TCA----T-TTTATC-C---C--CC------A---G---A-A
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                11326 33 +     89302 A---------TG---C-T-------T----CTT---AAAAT--G----TCA----T-TTTATC-C---C--CC------A---G---A-A
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             15829 33 -     58268 A---------TG---C-T-------T----CTT---AAAAT--G----TCA----T-TTTATC-C---C--CC------A---G---A-A
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             63822 33 +    119057 A---------TG---C-T-------T----CTT---AAAAT--G----TCA----T-TTTATC-C---C--CC------A---G---A-A
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               5791 33 -     25888 A---------TG---C-T-------T----CTT---AAAAT--G----TCA----T-TTTATC-C---C--CC------A---G---A-A
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 6443 32 -     16375 A---------TG---A-T-------AA---A-----AAAA--TG----ACA----T-TTCATC-C---C--AC------A---G---A-A
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                                 63 32 +      6337 A---------TG---A-T-------AA---A-----AAAA--TG----ACA----T-TTCATC-C---C--AC------A---G---A-A
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26379806 32 +  51448160 a---------ta---a-t-------a----a-----aaga-atg----tcA----G-ACAACT-C---C--cc------a---g---a-g
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        5037 32 -     13118 a---------ta---a-t-------a----a-----aaga-atg----tCA----G-ACAACT-C---C--cc------a---g---a-g
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   42845 32 -     72089 A---------CA---G-T-------A----A-----AAGT-GAG----TCA----G-ACAACT-C---C--AC------A---G---A-A
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 I 5
s Bison_bison.KN264915.1                                  6559519 32 +   6870073 A---------CA---G-T-------A----A-----AAGT-GAG----TCA----G-ACAAct-c---c--ac------a---g---a-a
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138139623 32 - 161108492 A---------CA---G-T-------A----A-----AAGT-GAG----TCA----G-ACAACt-c---c--ac------a---g---a-a
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     572160 32 -    998990 A---------CA---G-T-------A----A-----AAGT-GAG----TCA----G-ACAAct-c---c--ac------a---g---a-a
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136295356 32 - 158972876 A---------CA---G-T-------A----A-----AAGT-GAG----TCA----G-ACAAct-c---c--ac------a---g---a-a
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1232439 32 -   1914593 A---------CA---G-T-------A----A-----AAGT-GAG----TCA----G-ACAACt-c---c--ac------a---g---a-a
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               113676 33 -    171031 A---------TG---C-T-------T----CTT---AAAAT--G----TCA----T-TTTATC-C---C--CC------A---G---A-A
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 12707 33 +    125063 A---------TG---C-T-------T----CTT---AAAAT--G----TCA----T-TTTATC-C---C--CC------A---G---A-A
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                14752 33 -    216513 A---------TG---C-T-------T----CTT---AAAAT--G----TCA----T-TTTATC-C---C--CC------A---G---A-A
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        7292 33 -    134917 A---------TG---C-T-------T----CTT---AAAAT--G----TCA----T-TTTATC-C---C--CC------A---G---A-A
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3219223 32 -   8989139 A---------TG---A-T-------A----A-----AAGA-ATA----TCA----G-ACAACT-C---C--AC------A---G---A-A
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           396925 32 -  15254737 A---------TG---A-T-------A----A-----AAGA-ATA----TCA----G-ACAACT-C---C--AC------A---G---A-A
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2972660 32 +   6889770 A---------TG---A-T-------A----A-----AAGA-ATA----TCA----G-ACAACT-C---C--AC------A---G---A-A
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11519142 16 +  39901454 A---------TG---ATT-------A----A-----AAAA-AAG----T-----------------------------------------
i CanFam4.chr31                                         C 0 I 15
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   14167 16 +     87036 A---------TG---ATT-------A----A-----AAAA-AAG----T-----------------------------------------
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 I 15
s Canis_lupus_dingo.QKWQ01001993.1                       11265809 16 -  35597290 a---------tg---att-------a----a-----aaaa-aag----t-----------------------------------------
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 I 15
s Canis_lupus_familiaris.chr31                           11088343 16 +  39895921 a---------tg---att-------a----a-----aaaa-aag----t-----------------------------------------
i Canis_lupus_familiaris.chr31                          C 0 I 15
s Canis_lupus_orion.HG994411.1                           16455358 16 -  44759192 a---------tg---att-------t----a-----aaaa-aag----t-----------------------------------------
i Canis_lupus_orion.HG994411.1                          C 0 I 15
s Capra_aegagrus.CM003214.1                              21324858 32 + 157394656 A---------CA---G-T-------A----A-----AAGT-GAG----TCA----G-ACAAct-c---c--ac------a---g---a-a
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135706085 32 - 157403528 A---------CA---G-T-------A----A-----AAGT-GAG----TCA----G-ACAAct-c---c--ac------a---g---a-a
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          308728 32 +    345090 A---------TG---A-C-------A----A-----AAAAT--G----TCA----T-TCAATTTC---C--CC------A---G---A-A
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               59181 32 +     67245 A---------TG---A-T-------A----A-----AAGA-ATG----TTA----G-TTAACT-T---C--CC------A---G---A-A
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   30405 15 +     33760 -------------------------------------------G----TTA----G-TC-----A---C--CC------A---G---A-A
i Castor_canadensis.CasCan_scaffold_47037               I 16 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   158545 32 -    276539 A---------TG---A-T-------A----A-----AACA-GTA----TCA----G-ACAACT-C---T--CT------A---G---A-A
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15786277 19 -  24422027 -------------------------------------------GTCAGTCA----A-TT-----C---T--CT------G---G---A-A
i Cavia_aperea.AVPZ01000278.1                           I 7 C 0
s Cavia_porcellus.DS562889.1                             15798212 19 -  24440124 -------------------------------------------GTCAGTCA----A-TT-----C---T--CT------G---G---A-A
i Cavia_porcellus.DS562889.1                            I 7 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       176403 19 +    436027 -------------------------------------------GTCAGTCA----A-TT-----C---T--CT------G---G---A-A
i Cavia_tschudii.CavTsc_scaffold_488                    I 7 C 0
s Cebus_albifrons.Contig22                               18890529 33 -  29618158 A---------TG---C-T-------T----CTT---AAAAT--G----TCA----T-TTTATC-C---C--CC------A---G---A-A
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 8073 33 -     26817 A---------TG---C-T-------T----CTT---AAAAT--G----TCA----T-TTTATC-C---C--CC------A---G---A-A
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                12313 33 +     25043 A---------TG---C-T-------T----CTT---AAAAT--G----TCA----T-TTTATC-C---C--CC------A---G---A-A
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         7763 32 +     21754 A---------TG---A-C-------A----A-----AAAAT--G----TTA----T-TCAATTTC---C--CC------A---G---A-C
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4363537 32 +   7569818 a---------tg---a-a-------a----a-----aaga-atg----tcC----A-TCAACT-C---C--Cc------a---g---a-a
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         3294 32 -      9338 A---------TG---A-A-------A----A-----AAGA-ATG----TCC----A-TCAACT-C---C--CC------A---G---A-A
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6554964 33 +   6739814 A---------TG---A-T-------G----TTT---TAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      26441 33 +     60454 A---------TG---A-T-------G----TTT---TAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          1646 33 -     21101 A---------TG---A-T-------G----TTT---TAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         58956 33 -    107033 A---------TG---A-T-------G----TTT---TAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        1848 33 -     17608 A---------TG---A-T-------T----TTT---TAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          29343 33 +     30494 A---------TG---A-T-------T----TTT---TAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          58189 33 -     59240 A---------TG---A-T-------T----TTT---TAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          1890 33 +     16677 A---------TG---A-T-------T----GTT---TAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           24048 33 +     35983 A---------TG---A-T-------T----TTT---TAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11990576 33 +  12117833 A---------TG---A-T-------T----TTT---TAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46477334 33 +  46592721 A---------TG---A-T-------T----TTT---TAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      40885 33 -     45581 A---------TG---A-T-------T----TTT---TAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       1891 33 +     35577 A---------TG---A-T-------T----TTT---TAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        1667 33 -     25661 A---------TG---A-T-------T----TTT---TAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        1645 33 -     17744 A---------TG---A-T-------T----TTT---TAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        21261 33 +     37128 A---------TG---A-T-------T----TTT---TAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           2462 36 -      6963 A---------TG---A-T-------A----A-----AATA-ATA----TCA----G-TTTAAC-C---TGCTC------A---A-AAA-A
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           58729 31 -     68416 A---------TG---A-T-------A----A-----AAAA--TG----TCA----T-TTAATC-C---C--AC------A---G---A-A
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            7773 31 +     13308 A---------TG---A-T-------A----A-----AAAA--TG----TCA----T-TTAATC-C---C--AC------A---G---A-A
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             5330 33 -     18223 A---------TG---C-T-------T----CTT---AAAAT--G----TCA----T-TTTATG-C---C--CC------A---G---A-A
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             22353 33 +     25473 A---------TG---C-T-------T----CTT---AAAAT--G----TCA----T-TTTATC-C---C--CC------A---G---A-A
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           41388 33 +     57117 A---------TG---C-T-------T----CTT---AAAAT--G----TCA----T-TTTATC-C---C--CC------A---G---A-A
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          46067 33 +     54541 A---------TG---C-T-------T----CTT---AAAAT--G----TCA----T-TTTATC-C---C--CC------A---G---A-A
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15961441 19 +  43084221 -------------------------------------------GTCAGTAA----A-TT-----T---C--CC------A---G---A-A
i Chinchilla_lanigera.JH721867.1                        I 6 C 0
s Chiropotes_israelita.k141_1189915                         70883 33 +    196370 A---------TG---C-T-------T----CTT---AAAAT--G----TCA----T-TTTATC-C---C--CC------A---G---A-A
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          15063 33 +     40510 A---------TG---C-T-------T----CTT---AAAAT--G----TCA----T-TTTATC-C---C--CC------A---G---A-A
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15138807 33 -  15256731 A---------TG---A-T-------T----TTT---TAAAT--C----TCC----T-TCAATC-C---T--CC------A---G---A-A
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      33854 33 -     53260 A---------TG---A-T-------T----TTT---TAAAT--C----TCC----T-TCAATC-C---T--CC------A---G---A-A
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101144418 33 + 101219884 a---------tg---a-t-------t----ttt---taaat--c----tcc----t-tcaATC-C---C--CC------a---g---a-a
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                16150 34 -     21363 A---------TG---A-T-------A----C-----AAGA-ATA----TCA----G-TTAACT-C---T--TC------A---A-AAA-C
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           761457 34 +    964067 A---------TG---A-T-------A----C-----AAGA-ATA----TCA----G-TTAACT-C---T--TC------A---A-AAA-C
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_3549804               72 11 -       354 A---------TG---A-T-------A----A-----AATG--------------------------------------------------
i Chrysochloris_asiatica.ChrAsi_scaffold_3549804        C 0 I 18
s Colobus_angolensis.KN985967.1                          10886184 33 +  10971483 a---------tg---a-t-------t----ttt---aaaat--c----tcg----t-TCAATC-C---C--CC------A---G---A-A
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147664348 33 + 156195979 A---------TG---A-T-------T----TTT---AAAAT--C----TCG----T-TCAATC-C---C--CC------A---G---A-A
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            16333 33 +     23629 A---------TG---A-T-------T----TTT---AAAAT--C----TCG----T-TCAATC-C---C--CC------A---G---A-A
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60613274 22 +  78930452 ---------------------------------------A-ATA----CCA----A-TCAACT-C---C-C-C------A---g---g-t
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         39365 30 -     40477 A---------TG---A-T-------A----A-----AAGA-ATG----T------G-TTAACT-C---C--CC------A---G---A-A
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 278247 15 -    399297 -------------------------------------------A----TCC----G-TT-----T---C--TC------A---G---A-A
i Cricetomys_gambianus.CriGam_scaffold_949              I 13 C 0
s Cricetulus_griseus.LT883672.1                          53028929 15 +  72327488 -------------------------------------------G----CCA----A-TT-----C---C--CC------T---G---A-A
i Cricetulus_griseus.LT883672.1                         I 13 C 0
s Crocidura_indochinensis.CroInd_scaffold_88140              1836 31 +     11655 A---------TG---A-T-------A---GA------AGA-ATG----TCA----G-TTAAAT-A---A---C------C---A---A-A
i Crocidura_indochinensis.CroInd_scaffold_88140         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            51684 17 -     70449 A---------TG---A-T-------AA--CA-----ATGA-ATA----T-----------------------------------------
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 I 14
s Ctenodactylus_gundi.CteGun_scaffold_447                  207840 15 -    956709 -------------------------------------------A----TCA----G-TT-----C---C--CT------A---G---A-A
i Ctenodactylus_gundi.CteGun_scaffold_447               I 6 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 30425 15 -     67205 -------------------------------------------GTC----A----A-TC-----C---A--CT------G---A---A-A
i Ctenomys_sociabilis.CteSoc_scaffold_19489             I 6 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                17462 14 +     26546 ------------------------------------------------TCA----A-TT-----C---C--TT------G---G---A-A
i Cuniculus_paca.CunPac_flattened_line_16637            I 7 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             58548 19 -    236241 -------------------------------------------GTCAGTCA----A-TT-----C---C--CC------A---G---A-A
i Dasyprocta_punctata.DasPun_flattened_line_634         I 8 C 0
s Dasypus_novemcinctus.JH568778.1                          183337 36 -   6883506 a---------ta---a-t-------a----a-----aaga-ata----tca----G-TATAAA-C---Ctctc------a---aaa-a-a
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16844588 31 +  31942871 A---------TG---A-T-------A----A-----AAAA--TG----TCA----T-CTAATA-C---C--AC------A---G---A-A
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80036484 32 -  96802777 A---------CA---A-T-------A----A-----AAGA-ATG----TCA----G-ACAACt-c---c--cc------a---g---a-g
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18698456 32 -  18957592 A---------TT---A-T-------A----A-----AAGA-ATG----TCA----G-TTAACT-T---C--Cc------a---g---a-a
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 322186 32 +    993696 a---------tg---a-a-------a----a-----aaga-atg----tcC----A-TCAACT-C---C--Cc------a---g---a-a
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   2839 32 +    151128 A---------TG---A-A-------A----A-----AAGA-ATG----CCC----A-TCAACT-C---C--CC------A---G---A-A
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   156698 19 +    228994 -------------------------------------------GTCAGTAA----A-TT-----T---A--CC------A---G---A-A
i Dinomys_branickii.DinBra_scaffold_1996                I 6 C 0
s Dipodomys_ordii.KN672545.1                              3656027 15 +   4240102 -------------------------------------------G----TTA----T-TT-----C---T--CC------A---G---A-T
i Dipodomys_ordii.KN672545.1                            I 15 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 27660 15 +     28912 -------------------------------------------G----TTA----T-TT-----C---T--CC------A---G---A-T
i Dipodomys_stephensi.DipSte_scaffold_44365             I 15 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                35798 19 -     73477 -------------------------------------------GTGAGTCA----A-TT-----T---C--TG------G---G---A-A
i Dolichotis_patagonum.DolPat_scaffold_14102            I 8 C 0
s Echinops_telfairi.JH980316.1                           22998190 11 -  44670279 a---------tg---a-t-------a----a-----aata--------------------------------------------------
i Echinops_telfairi.JH980316.1                          C 0 I 20
s Eidolon_helvum.KE772537.1                                 11889 32 +     24177 A---------TG---A-T-------A----A-----AAGA-ATG----TCA----A-TCAACT-C---C--tc------a---g---a-a
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1491134 32 +   1727528 A---------CA---G-C-------A----A-----AAGT-GGG----TCA----G-ATAAct-c---c--ac------a---g---a-a
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7815612 23 +  15467074 -------------------------------------------------CT----T-TCAact-a---c--ag------ggggaaaaa-a
i Elephantulus_edwardii.JH947210.1                      I 223 C 0
s Ellobius_lutescens.LOEQ01003611.1                        239476 15 -    369425 -------------------------------------------T----CTA----T-TT-----C---C--TC------C---A---A-A
i Ellobius_lutescens.LOEQ01003611.1                     I 13 C 0
s Ellobius_talpinus.LOJH01090055.1                           6589 15 -      7838 -------------------------------------------G----CCA----T-TT-----C---C--TC------C---A---A-A
i Ellobius_talpinus.LOJH01090055.1                      I 13 C 0
s Enhydra_lutris.KZ291749.1                              85871846 15 +  99434291 A---------TG---A-T-------A----A-----AAGA-AGG----T-----------------------------------------
i Enhydra_lutris.KZ291749.1                             C 0 I 17
s Eptesicus_fuscus.JH977687.1                             4703835 32 +   6522550 A---------TG---A-T-------A----A-----AGGA-ATG----TCA----G-TCAACT-C---C--CC------a---g---a-a
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5852640 32 -   7175178 A---------TG---A-T-------A----A-----AAGA-ATG----TCC----A-TTAACT-C---T--Cc------a---g---a-a
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13351143 32 +  41866177 A---------TG---A-T-------A----A-----AAGA-ATG----TCC----A-TTAACT-C---T--Cc------a---g---a-a
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          12633 32 +     92910 A---------TG---A-T-------A----A-----AAGA-ATG----TCC----A-TTAACT-C---T--Cc------a---g---a-a
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erythrocebus_patas.Contig8                             48770985 33 -  48907691 A---------TG---A-T-------T----TTT---TAAAT--C----TCC----T-TCAATC-C---C--CC------A---G---A-A
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          314690 32 +    330699 A---------TA---A-T-------A----A-----AAGA-ATG----TCA----G-ACAACT-C---C--CC------A---G---A-G
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             61144 32 +     89355 A---------TA---A-T-------A----A-----AAGA-ATG----TCA----G-ACAACT-C---C--CC------A---G---A-G
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              4781 33 +     13586 A---------TG---A-T-------AAA--A-----AAAA--TG----TCA----T-TTAATC-C---C--AT------A---G---A-A
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               4715 32 -      6809 A---------TG---A-T-------AA---A-----AAAA--TG----TCA----T-TTAATC-C---C--AT------A---G---A-A
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            11188 32 +     36558 A---------TG---A-T-------AA---A-----AAAA--TG----TCA----T-TTAATC-C---C--AT------A---G---A-A
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             7510 32 +     60246 A---------TG---A-T-------AA---A-----AAAA--TG----TCA----T-TTAATC-C---C--AT------A---G---A-A
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                10988 32 +    109717 A---------TG---A-T-------AA---A-----AAAA--TG----TCA----T-TTAATC-C---C--AT------A---G---A-A
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               15372 32 +     16540 A---------TG---A-T-------AA---A-----AAAA--TG----TCA----T-TTAATC-C---C--AT------A---G---A-A
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                15646 32 +     27497 A---------TG---A-T-------AA---A-----AAAA--TG----TCA----T-TTAATC-C---C--AC------A---G---A-A
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           18102 32 +     26808 A---------TG---A-T-------AA---A-----AAAA--TG----TTA----T-TTAATC-T---C--AT------A---G---A-A
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                32838 33 +     46535 A---------TG---A-T-------AAA--A-----AAAA--TG----TCA----T-TTAATC-C---C--AT------A---G---A-A
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              15560 32 -     29447 A---------TG---A-T-------AA---A-----AAAA--TG----TCA----T-TTAATC-C---C--AT------A---G---A-A
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129892632  9 - 159252932 A---------CA---A-T-------A----A-----AT----------------------------------------------------
i Felis_catus.CM001386.2                                C 0 I 7
s Felis_catus_fca126.CM031420.1                         129279719  9 - 158578461 a---------ca---a-t-------a----a-----at----------------------------------------------------
i Felis_catus_fca126.CM031420.1                         C 0 I 7
s Felis_nigripes.FelNig_flattened_line_8080                 20864  9 +     52776 A---------CA---A-T-------A----A-----AT----------------------------------------------------
i Felis_nigripes.FelNig_flattened_line_8080             C 0 I 7
s Galago_moholi.ctg555                                     210613 34 -    847004 A---------TG---A-T-------AAAAAA-----AAAA---A----AAA----G-TCAATC-C---C--AC------A---C---A-A
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           12992 30 -     43889 A---------TG---A-T-------A----A-----AAAA---A----AAA----G-TCAATC-C---C--AC------A---C---A-A
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          10067 27 +     27357 A---------TG---A-T-------A----A--------A---A----AAA----G-TCAATC-C---C--AC------G---C---A-A
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               155954 38 +    324696 A---------TT---A-T-------A----A-----AAGA-ATG----TCA----G-TCAACC-C---C--CCCCCCCCA---G---A-A
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    180931 32 -    189561 A---------CA---G-T-------A----A-----AAGT-GAG----TTA----G-ACAAct-c---c--ac------a---g---a-a
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           12772 16 -     18683 -------------------------------------------G----TCC----A-TT-----C---C--CCC-----A---G---A-A
i Glis_glis.GliGli_scaffold_79770                       I 6 C 0
s Gorilla_beringei.k141_111300                               5046 33 -     14630 A---------TG---A-T-------T----TTT---AAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119652145 33 - 195582420 a---------tg---a-t-------t----ttt---aaaat--c----tca----t-tcaaTC-C---C--CC------a---g---a-a
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   77317 16 +    118900 -------------------------------------------G----TAA----A-TT-----C---C--CCC-----A---G---A-A
i Graphiurus_murinus.GraMur_scaffold_4493               I 6 C 0
s Hapalemur_alaotrensis.k141_1280836                         1560 31 +     10286 A---------TG---A-T-------A----A-----AAAA--TG----TCA----T-TTAATC-C---C--AT------A---G---A-A
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                               37 31 -     11661 A---------TG---A-T-------A----A-----AAAA--TG----TCA----T-TTAATC-C---C--AT------A---G---A-A
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             5366 31 +     56096 A---------TG---A-T-------A----A-----AAAA--TG----TCA----T-TTAATC-C---C--AT------A---G---A-A
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        28616 31 -     42470 A---------TG---A-T-------A----A-----AAAA--TG----TCA----T-TTAATC-C---C--AT------A---G---A-A
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        45239 31 -     54384 A---------TG---A-T-------A----A-----AAAA--TG----TCA----T-TTAATC-C---C--AT------A---G---A-A
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              16891 17 +     53719 A---------TG---A-T-------AA--CA-----ATGA-ATA----T-----------------------------------------
i Helogale_parvula.HelPar_flattened_line_22962          C 0 I 14
s Hemitragus_hylocrius.HemHyl_scaffold_16669                27130 32 -     91191 A---------CA---G-T-------A----A-----AAGT-GAG----TCA----G-ACAACT-C---C--AC------A---A---A-A
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2550779 19 +  31725842 -------------------------------------------GTCAATCA----A-TC-----C---C--CC------A---G---A-A
i Heterocephalus_glaber.JH602058.1                      I 8 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               60211 11 +     73687 A---------TG---A-T-------A----A-----AATA--------------------------------------------------
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 I 119
s Hippopotamus_amphibius.HipAmp_scaffold_1308              146778 32 +    277961 A---------TA---A-T-------A----A-----AAGA-ATG----TCA----G-ACAACT-C---C--CC------A---G---A-G
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      278057 32 -    477199 A---------TG---A-T-------A----A-----AAGA-ATG----TCA----G-TCAACT-C---C--Cc------a---g---a-a
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              7204 32 -      9143 A---------TG---A-T-------A----A-----AAGA-ATG----TCA----G-TCAACT-C---C--CC------A---G---A-A
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      4453 33 -   7690867 A---------TG---A-T-------T----TTT---AAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 16964 15 -     67322 A---------TG---A-T-------A----A-----ATGA-ATA----T-----------------------------------------
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 I 14
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           18660 19 -    119109 -------------------------------------------GTCCGTCA----A-TT-----T---T--CC------A---G---A-A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       I 8 C 0
s Hylobates_abbotti.k141_493872                              4877 33 +      5897 A---------TG---A-T-------T----TTT---AAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_624065                               1743 33 +      2112 A---------TG---A-T-------T----TTT---AAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Hylobates_agilis.k141_624065                          C 0 C 0
s Hylobates_klossii.k141_466549                             11317 33 +     11537 A---------TG---A-T-------T----TTT---AAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14624424 33 -  25970782 A---------TG---A-T-------T----TTT---AAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            1678 33 -      2977 A---------TG---A-T-------T----TTT---AAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     5835 19 +     22540 -------------------------------------------GTCAGTCA----A-TT-----C---C--CT------G---G---A-A
i Hystrix_cristata.HysCri_scaffold_50788                I 8 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7125550 19 +  13083262 -------------------------------------------a----aaa----a-ta-----tgaat--cc-----aa---g---a-a
i Ictidomys_tridecemlineatus.JH393315.1                 I 6 C 0
s Indri_indri.k141_4418183                                   1209 31 -      1457 A---------TG---A-T-------A----A-----AAAA--TG----ACA----T-TTCATC-C---C--CC------A---G---A-A
i Indri_indri.k141_4418183                              C 0 I 9
s Inia_geoffrensis.IniGeo_flattened_line_66725               8682 32 +     17520 A---------CA---A-T-------A----A-----AAGA-ATG----TCA----G-ACAACT-C---C--CC------A---G---A-G
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8565571 13 +  11848649 ATAAGATCACTA---A--------------------------------------------------------------------------
i Jaculus_jaculus.JH725517.1                            C 0 I 24
s Kogia_breviceps.KogBre_flattened_line_35920               23300 32 +     37189 A---------CA---A-T-------A----A-----AAGA-ATG----TCA----G-ACAACT-C---C--CC------A---G---A-G
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          49911 33 -    147782 A---------TG---C-T-------T----CTT---AAAAT--G----TCA----T-TTTATC-C---C--CT------A---G---A-A
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   113926 32 -    115756 A---------TG---A-T-------A----A-----AGGA-ATG----TCA----G-TCAACT-C---C--AC------A---G---A-A
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258406921 31 - 285822530 A---------TG---A-T-------A----A-----AAAA--TG----TCA----T-TTAATC-C---C--AT------A---G---A-A
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        23672 31 +     39228 A---------TG---A-T-------A----A-----AAAA--TG----TCA----T-TTAATT-C---C--AC------A---G---A-A
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            53056 31 +     63517 A---------TG---A-T-------A----A-----AAAA--TG----TCA----T-TTAATT-C---C--AC------A---G---A-A
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        78315 31 +    116806 A---------TG---A-T-------A----A-----AAAA--TG----TCA----T-TTAATT-C---C--AC------A---G---A-A
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     31311 31 -     33031 A---------TG---A-T-------A----A-----AAAA--TG----TCA----T-TTAATT-C---C--AC------A---G---A-A
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3085654 15 -   3498232 A---------TG---A-T-------A----A-----AAGA-ATG----T-----------------------------------------
i Leptonychotes_weddellii.KB714749.1                    C 0 I 17
s Lepus_americanus.LepAme_scaffold_62849                    12946 21 +     22452 A---------TG---A-C-------A----A------AGA-ATG----TCA----G-TC-----A---A---------------------
i Lepus_americanus.LepAme_scaffold_62849                C 0 I 2
s Lipotes_vexillifer.KE558548.1                            135637 32 +   3060487 A---------CA---A-T-------A----A-----AAGA-ATG----TCA----G-AGAACT-C---C--cc------a---g---a-g
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19248050 33 +  19376315 A---------TG---A-T-------T----TTT---TAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           10373 34 +     84689 A---------TG---A-TTAAAAA-A----A-----A--A---A----AAA----G-TCAATC-C---C--AC------A---C---A-A
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3778122 35 +   6799190 A---------TG---A-TTAAAAAAA----A-----A--A---A----AAA----G-TCAATC-C---C--AC------A---C---A-A
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20593911 20 -  62548349 -------------------------------------------------CA----G-TCAGCC-A---C--AC------A---AAAAA-T
i Loxodonta_africana.GL010040.1                         I 13 C 0
s Lycaon_pictus.CM007556.1                               11087799 16 +  39895028 a---------tg---att-------a----a-----aaaa-aag----t-----------------------------------------
i Lycaon_pictus.CM007556.1                              C 0 I 15
s Macaca_arctoides.k141_2201161                             19793 33 +     74745 A---------TG---A-T-------T----TTT---CAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12706249 33 +  12821369 A---------TG---A-T-------T----TTT---CAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                1894 33 -      3136 A---------TG---A-T-------T----TTT---CAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           46711 33 +     63263 A---------TG---A-T-------T----TTT---CAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                 1414 33 -      2568 A---------TG---A-T-------T----TTT---CAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 2000 33 -      7381 A---------TG---A-T-------T----TTT---CAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  45218 33 -     79256 A---------TG---A-T-------T----TTT---CAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196035326 33 + 196197964 A---------TG---A-T-------T----TTT---CAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11445494 33 +  11645122 A---------TG---A-T-------T----TTT---CAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   4165 33 -     46448 A---------TG---A-T-------T----TTT---CAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                1837 33 -     13212 A---------TG---A-T-------T----TTT---CAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 15518 33 -     55006 A---------TG---A-T-------T----TTT---CAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43840635 33 +  43892939 A---------TG---A-T-------T----TTT---CAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               16804 33 -     24607 A---------TG---A-T-------T----TTT---CAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               4170 33 -     27140 A---------TG---A-T-------T----TTT---CAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                701262 32 +    802869 A---------TG---A-T-------A----A-----AAGA-ATG----TCA----A-TCAACT-C---C--TC------A---G---A-A
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43437212 33 -  43563597 A---------TG---A-T-------T----TTT---TAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4450038 33 -   4543643 A---------TG---A-T-------T----TTT---TAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            145292 32 +    252755 A---------TG---A-T-------A----A-----AAGA-ATA----TCA----A-TCAACT-C---C--Ct------a---g---a-a
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             35369 32 +     58827 A---------TG---A-T-------A----A-----AAGA-ATA----TCA----A-TCAACT-C---C--Ct------a---g---a-a
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36873391 19 +  64221397 -------------------------------------------a----aaa----a-ta-----tgaat--cc-----aa---g---a-a
i Marmota_marmota.CZRN01000005.1                        I 6 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       64080 32 -    234502 A---------TG---A-T-------A----A-----AGGA-GTG----TCA----G-TCAACT-C---C--CC------G---G---A-A
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433              656 15 -     87323 A---------TG---A-T-------A----A-----AAGA-AGA----T-----------------------------------------
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 I 17
s Meriones_unguiculatus.MerUng_scaffold_52233               12433 14 +     15977 -------------------------------------------G----CCA----A-TT-----C---T--A-------A---G---A-A
i Meriones_unguiculatus.MerUng_scaffold_52233           I 10 C 0
s Mesocricetus_auratus.KB708139.1                         1046638 15 -  26018355 -------------------------------------------G----CCA----A-TT-----C---C--CC------T---G---A-A
i Mesocricetus_auratus.KB708139.1                       I 13 C 0
s Mesoplodon_bidens.MesBid_scaffold_227248                      0  8 -      1377 ----------------------------------------------------------------C---C--CC------A---G---A-G
i Mesoplodon_bidens.MesBid_scaffold_227248              N 0 I 1
s Microcebus_murinus.CM007691.1                          16509956 19 +  47401472 -------------------------------------------a----tca----C-TTAATC-C---C--AC------A---G---A-A
i Microcebus_murinus.CM007691.1                         I 12 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  34166 11 -     48017 A---------TG---A-T-------A----A-----TATA--------------------------------------------------
i Microgale_talazaci.MicTal_scaffold_34660              C 0 I 21
s Micronycteris_hirsuta.MicHir_scaffold_37978               22366 32 -     32043 A---------TG---A-T-------A----A-----AAGA-ATG----TCA----G-TCAACT-T---C--CT------A---G---A-A
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22819775 15 -  98408828 -------------------------------------------G----CCA----T-TT-----C---C--TC------C---G---A-A
i Microtus_ochrogaster.CM001673.1                       I 13 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8209360 32 +  10048721 A---------TG---A-T-------A----A-----AAGA-ATG----TCA----G-TCAACT-C---A--Cc------a---g---a-a
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            34014 32 +     45743 A---------TG---A-T-------A----A-----AAGA-ATG----TCA----G-TCAACT-C---A--CC------A---G---A-A
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         1765 33 +     29742 A---------TG---A-T-------T----TTT---TAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        11167 15 -    104932 A---------TG---A-T-------A----A-----AAGA-ATG----T-----------------------------------------
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 I 17
s Mirza_zaza.k141_226143                                     5330 31 +      8497 A---------TG---A-T-------A----A-----AAAA--TG----TCA----T-TTAATC-C---C--AC------A---G---A-A
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 146072 32 +    154973 A---------CA---A-T-------A----A-----AAGA-ATG----TCA----G-ACAACT-C---C--CC------A---G---A-G
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                160888 32 +    265003 A---------TG---A-T-------A----A-----AAGA-ATG----TCA----G-TTAACG-T---C--CC------A---G---A-A
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                   676 32 -     19904 A---------CA---G-T-------A----A-----AAGT-GAG----TCA----G-ACAACT-C---C--AC------A---G---A-A
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  144587 16 -    168139 ----------TG---A-T-------AA--CA-----ATGA-ATA----T-----------------------------------------
i Mungos_mungo.MunMun_flattened_line_8729               C 0 I 14
s Murina_feae.MurFea_scaffold_2254                          19218 32 -    100666 A---------TG---A-T-------A----A-----AGGA-ATG----TCA----G-TCAACC-C---A--CC------A---G---A-A
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70766279 15 +  92629107 -------------------------------------------G----CCA----C-TT-----C---C--TC------a---g---a-g
i Mus_caroli.LT608236.1                                 I 13 C 0
s Mus_musculus.chr16                                     75489338 15 +  98207768 -------------------------------------------G----CCA----A-TT-----C---C--TC------A---G---A-G
i Mus_musculus.chr16                                    I 13 C 0
s Mus_pahari.LT608305.1                                  67555566 15 +  89017189 -------------------------------------------G----ATA----A-TT-----C---C--TC------A---G---G-G
i Mus_pahari.LT608305.1                                 I 13 C 0
s Mus_spretus.CM004110.1                                 74330516 15 +  97876770 -------------------------------------------G----CCA----A-TT-----T---C--TC------A---G---A-G
i Mus_spretus.CM004110.1                                I 13 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             11555 14 +     98495 -------------------------------------------G----TCA----A-TT-----C---C--CCC-----A---G------
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 6 C 0
s Mustela_putorius.JH417978.1                             4424026 15 -  28371801 A---------TG---A-T-------A----A-----AAGA-AGG----T-----------------------------------------
i Mustela_putorius.JH417978.1                           C 0 I 17
s Myocastor_coypus.MyoCoy_scaffold_3653                     89707 16 -    117718 -------------------------------------------GTC----AGCTAA-TC-----C---A--AT------G----------
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 8 C 0
s Myotis_brandtii.KE161952.1                               967516 32 +   8389877 A---------TG---A-T-------A----A-----AGGA-ATG----TCA----G-TCAACT-C---A--Cc------a---g---a-a
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5019193 32 +   6462685 A---------TG---A-T-------A----A-----AGGA-ATG----TCA----G-TCAACT-C---A--CT------a---g---a-a
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3465097 32 -   3747815 A---------TG---A-T-------A----A-----AGGA-ATG----TCA----G-TCAACT-C---A--Cc------a---g---a-a
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        10311 32 +     66751 A---------TG---A-T-------A----A-----AGGA-ATG----TCA----G-TCAACT-C---A--CT------A---G---A-A
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             4716 28 -      8794 A---------CA---T-T-------A----A-----AAGA-ATA----TCA----G-CTAAGC-C---C--CC-----------------
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 I 5
s Nannospalax_galili.KL201303.1                            118383 15 +    362372 -------------------------------------------g----CCA----A-TT-----C---C--TT------T---G---A-A
i Nannospalax_galili.KL201303.1                         I 264 C 0
s Nasalis_larvatus.k141_153429                               8266 33 +     48152 A---------TG---A-T-------T----TTT---AAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4484559 15 -  14209539 A---------TG---A-T-------A----A-----AAGA-ATG----T-----------------------------------------
i Neomonachus_schauinslandi.NINY01007774.1              C 0 I 17
s Neophocaena_asiaeorientalis.KZ688543.1                  3950687 32 -   4490290 A---------CA---A-T-------A----A-----AAGA-ATG----TCA----G-ACAACt-c---c--cc------a---g---a-g
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  48978 32 +     94413 A---------TG---A-T-------A----A-----AAGA-ATG----TCA----G-TTAACT-C---C--TA------A---G---A-A
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1439838                           2625 33 +      3718 A---------TG---A-T-------T----TTT---AAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Nomascus_annamensis.k141_1439838                      I 43 I 96
s Nomascus_concolor.k141_226614                               981 33 -      5092 A---------TG---A-T-------T----TTT---AAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_642452                            1764 33 +      2851 A---------TG---A-T-------T----TTT---AAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             24699 33 -  18771707 A---------TG---A-T-------T----TTT---AAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  2402 33 +      4512 A---------TG---A-T-------T----TTT---AAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                30604 13 +   3668941 A---------TG---A-T-------A----A-----AAGA---G----T-----------------------------------------
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 I 15
s Nycticebus_bengalensis.LG16                            65566808 32 -  95554990 A---------TG---A-TTTAAAA-A----A-----A--A---A------A----G-TCAATC-C---C--AT------A---C---A-A
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            3537 32 +      6470 A---------TG---A-TTTAAAA-A----A-----A--A---A------A----G-TCAATC-C---C--AT------A---C---A-A
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65669144 30 +  89412551 A---------TG---A-TTTAA---A----A-----A--A---A------A----G-TCAATC-C---C--AC------A---C---A-A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4995704 27 -  23139505 t---------ta---g-a-------a----a------aaa-atc----gcA----G-TC-----T---G--CT------A---G---A-t
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3685261 15 +  10294119 -------------------------------------------a--tc--a----a-TC-----C---A--CT------G---A---A-A
i Octodon_degus.JH651621.1                              I 8 C 0
s Odobenus_rosmarus.KB229369.1                             679224 15 -   3126709 A---------TG---A-T-------A----A-----AAGA-ATG----T-----------------------------------------
i Odobenus_rosmarus.KB229369.1                          C 0 I 17
s Odocoileus_virginianus.KZ101650.1                       1079365 32 +   1425656 A---------CA---G-C-------A----A-----AAGT-GAG----TCA----G-ATAACt-c---c--ac------a---g---a-a
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         36659 32 +     78940 A---------CA---G-T-------A----A-----AAGT-GAG----TCA----G-ACAAct-c---c--ac------a---g---a-a
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  125028 15 +    145789 -------------------------------------------G----CCA----T-TT-----C---C--TC------C---A---A-A
i Ondatra_zibethicus.OndZib_scaffold_6821               I 13 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  36829 15 +     62360 -------------------------------------------A----CCA----A-TT-----C---C--TC------C---A---A-A
i Onychomys_torridus.OnyTor_scaffold_12578              I 13 C 0
s Orcinus_orca.KB316965.1                                 7224382 19 -   7562323 -------------------------------------------G----TCA----G-ACAACt-c---c--cc------a---g---a-g
i Orcinus_orca.KB316965.1                               I 13 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              57219 23 -     66828 -------------------------------------------------CT----A-TCAAAC-A---C--AC------ACAAAAAAA-A
i Orycteropus_afer.OryAfe_flattened_line_13509          I 13 C 0
s Oryctolagus_cuniculus.CM000803.1                      141875984 21 + 163896628 A---------TG---A-C-------A----A------AGA-ATG----TCA----G-TC-----A---A---------------------
i Oryctolagus_cuniculus.CM000803.1                      C 0 I 2
s Otocyon_megalotis.JAEUCK010005121.1                      307889 13 -    505867 A---------TG---A-T-------A----A-----AAAA---G----T-----------------------------------------
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 I 15
s Otolemur_crassicaudatus.k141_505435                         433 30 -     53940 A---------TG---A-T-------A----A-----AAAA---A----AAA----G-TCAATC-C---C--AC------A---C---A-A
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18008406 28 -  38779656 A---------Tg---a-t-------a----a-----a--a---a----aaa----g-tcaatc-c---c--ac------a---c---a-a
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134076924 32 - 275406953 A---------CA---G-T-------A----A-----AAGT-GAG----TCA----G-ACAACt-c---c--ac------a---a---a-a
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      78138 32 +    140051 A---------CA---G-T-------A----A-----AAGT-GAG----TCA----G-ACAACT-C---C--AC------A---A---A-A
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127574411 33 - 205426864 a---------tg---a-t-------t----ttt---aaaat--c----tca----t-tcaaTC-C---C--Cc------a---g---a-a
i Pan_paniscus.CM003386.1                               I 26 C 0
s Pan_troglodytes.CM009241.2                            120151564 33 - 196562556 a---------tg---a-t-------t----ttt---aaaat--c----tca----t-tcaaTC-C---C--Cc------a---g---a-a
i Pan_troglodytes.CM009241.2                            I 26 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  34017  9 +    295523 A---------CA---A-T-------A----A-----AT----------------------------------------------------
i Panthera_onca.PanOnc_flattened_line_1615              C 0 I 7
s Panthera_pardus.KV860323.1                              3637753  9 +  18214204 A---------CA---A-T-------A----A-----AT----------------------------------------------------
i Panthera_pardus.KV860323.1                            C 0 I 7
s Panthera_tigris.KE721879.1                              5027426  9 -   6340057 a---------ca---a-t-------a----a-----at----------------------------------------------------
i Panthera_tigris.KE721879.1                            C 0 I 7
s Pantholops_hodgsonii.KE114631.1                         1065784 32 -   1292953 A---------CA---G-T-------A----A-----AAGT-GAG----TCA----G-ACAact-c---t--ac------a---g---a-t
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188156000 33 - 188283584 a---------tg---a-t-------t----ttt---taaat--c----tca----t-tcaATC-C---C--CC------A---g---a-a
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             4316 33 +      5367 A---------TG---A-T-------T----TTT---TAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47513387 33 +  47705337 A---------TG---A-T-------T----TTT---TAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 67364 33 -    104429 A---------TG---A-T-------T----TTT---TAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    5897 33 +     14967 A---------TG---A-T-------T----TTT---TAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 1757 33 -      7628 A---------TG---A-T-------T----TTT---TAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    115466 15 -    135482 A---------TG---A-T-------A----A-----ATGA-ATG----T-----------------------------------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 I 14
s Perodicticus_ibeanus.k141_117958                           5121 34 -     23713 A---------TG---A-T-AAAAAAA----A-----A--A---G----TCA----A-TTAATC-C---C--AC------A---C---A-A
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            24430 37 -     27972 A---------TG---A-T-AAAAAAA----A--AAAA--A---G----TCA----A-TTAATC-C---C--AC------A---C---A-A
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      44275 15 -     45160 -------------------------------------------G----TTA----T-TC-----C---T--CC------A---G---A-G
i Perognathus_longimembris.PerPac_flattened_line_22291  I 14 C 0
s Peromyscus_maniculatus.KI615518.1                       4950066 15 -   8017169 -------------------------------------------G----CCA----A-TT-----C---C--TC------A---G---A-A
i Peromyscus_maniculatus.KI615518.1                     I 13 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    12168 19 -     36578 -------------------------------------------GTCAGTCA----A-TC-----C---C--TT------G---G---A-A
i Petromus_typicus.PetTyp_scaffold_33007                I 8 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            120976 32 -    122454 A---------CA---A-T-------A----A-----AAGA-ATG----TCA----G-ACAACT-C---C--CC------A---G---A-G
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1987485                           1785 33 -      5908 A---------TG---A-T-------T----TTT---AAAAT--C----TCA----T-TCAATC-C---C--CC------C---G---A-A
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       2409 33 -     17985 A---------TG---A-T-------T----TTT---AAAAT--C----TCA----T-TCAATC-C---C--CC------C---G---A-A
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            1776 33 +      7694 A---------TG---A-T-------T----TTT---AAAAT--C----TCA----T-TCAATC-C---C--CC------C---G---A-A
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26740254 33 +  26888534 a---------tg---a-t-------t----ttt---aaaat--c----tca----t-tcaaTC-C---C--CC------C---g---a-a
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            97135 32 +    112873 A---------TG---A-T-------A----A-----AGGA-ATG----TCA----G-TCAACT-C---C--CC------C---A---A-A
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             43384 33 -     61926 A---------TG---C-T-------T----CTT---AAAAT--G----TCA----T-TTCATC-C---C--CC------A---G---A-A
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        24815 33 +     78826 A---------TG---C-T-------T----CTT---AAAAT--G----TCA----T-TTCATC-C---C--CC------A---G---A-A
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              8764 33 -     15800 A---------TG---C-T-------T----CTT---AAAAT--G----TCA----T-TTCATC-C---C--CC------A---G---A-A
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        11962 33 -     16101 A---------TG---C-T-------T----CTT---AAAAT--G----TCA----T-TTCATC-C---C--CC------A---G---A-A
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          5271 33 +      9673 A---------TG---C-T-------T----CTT---AAAAT--G----TCA----T-TTCATC-C---C--CC------A---G---A-A
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13474267 33 -  19735023 A---------TG---C-T-------T----CTT---AAAAT--G----TCA----T-TTCATC-C---C--CC------A---G---A-A
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           13173 33 -     31692 A---------TG---C-T-------T----CTT---AAAAT--G----TCA----T-TTCATC-C---C--CC------A---G---A-A
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           5056 32 +     21690 A---------CA---A-T-------A----A-----AAGA-ATG----TCA----G-ACAACT-C---C--CC------A---G---A-G
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       22614 33 +     44506 A---------TG---C-T-------T----CTT---AAAAT--G----TCA----T-TTTATC-C---C--CC------A---G---A-A
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        22826 33 +     67491 A---------TG---T-T-------T----CTT---AAAAT--G----TCA----T-TTTATC-C---C--CC------A---G---A-A
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      13065 33 -     98129 A---------TG---C-T-------T----CTT---AAAAT--G----TCA----T-TTTATC-C---C--CC------A---G---A-A
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     22665 33 +    147771 A---------TG---C-T-------T----CTT---AAAAT--G----TCA----T-TTTATC-C---C--CC------A---G---A-A
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        22920 33 -     23762 A---------TG---C-T-------T----CTT---AAAAT--G----TCA----T-TTTATC-C---C--CC------A---G---A-A
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          3386 33 -     55515 A---------TG---T-T-------T----CTT---AAAAT--G----TCA----T-TTTATC-C---C--CC------A---G---A-A
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         22739 33 +    152463 A---------TG---C-T-------T----CTT---AAAAT--G----TCA----T-TTTATC-C---C--CC------A---G---A-A
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                        456 33 -    119457 A---------TG---C-T-------T----CTT---AAAAT--G----TCA----T-TTTATC-C---C--CC------A---G---A-A
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         12461 33 +    134592 A---------TG---C-T-------T----CTT---AAAAT--G----TCA----T-TTTATC-C---C--CC------A---G---A-A
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          23049 33 -     75465 A---------TG---C-T-------T----CTT---AAAAT--G----TCA----T-TTTATC-C---C--CC------A---G---A-A
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              186933 33 -    373494 a---------tg---a-t-------t----ttt---aaaat--c----tca----g-tcaATC-C---C--Cc------a---g---a-a
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19807581 33 +  19899266 A---------TG---A-T-------T----TTT---AAAAT--C----TCA----G-TCAATC-C---C--CC------A---G---A-A
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               5511 33 -     15069 A---------TG---A-T-------T----TTT---AAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              5645 33 +     14865 A---------TG---A-T-------T----TTT---AAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                1302 11 -      9567 A---------TG---A-T-------A----A-----AATA--------------------------------------------------
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 I 120
s Prolemur_simus.MPIZ01000048.1                           6848302 31 +  12164890 A---------tg---a-t-------a----a-----aaaa--tg----tca----t-ttaatc-c---C--AT------A---G---A-A
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coronatus.k141_1353159                         3359 32 +     11805 A---------TG---A-T-------AA---A-----AAAA--TG----ACA----T-TTCATC-C---C--AC------A---G---A-A
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           42701 32 +     52369 A---------TG---A-T-------AA---A-----AAAA--TG----ACA----T-TTCATC-C---C--AC------A---G---A-A
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         35087 32 -     44753 A---------TG---A-T-------AA---A-----AAAA--TG----ACA----T-TTCATC-C---C--AC------A---G---A-A
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            17011 32 +     27322 A---------TG---A-T-------AA---A-----AAAA--TG----ACA----T-TTCATC-C---C--AC------A---G---A-A
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       16647 32 -     53241 A---------TG---A-T-------AA---A-----AAAA--TG----GCA----T-TTCATC-C---C--AC------A---G---A-A
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         38912 32 -     48185 A---------TG---A-T-A-----A----A-----AAAA--TG----ACA----T-TTCATC-C---C--AC------A---G---A-A
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           33985 12 +     77221 -------------------------------------------G----CCA----A-TT-----C---C--T-------A---T------
i Psammomys_obesus.NESX01026517.1                       I 10 I 1
s Pteronotus_parnellii.KE867983.1                            3532 32 -     27784 a---------ag---a-t-------a----a-----aaaa-atg----tca----G-TTAACT-T---T--CT------A---T---A-A
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        246334 15 -    344369 A---------TG---A-T-------A----A-----AAGA-AGG----T-----------------------------------------
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 I 17
s Pteropus_alecto.KB031157.1                             13245641 32 -  17261082 A---------TG---A-T-------A----A-----AAGA-ACG----TCA----A-TCAACT-C---C--Tc------a---g---a-a
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             603591 32 -   3946241 A---------TG---A-T-------A----A-----AAGA-ACG----TCA----A-TCAACT-C---C--Tc------a---g---a-a
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131534011  9 - 161321710 a---------ca---a-t-------a----a-----at----------------------------------------------------
i Puma_concolor.QAVW01000427.1                          C 0 I 7
s Pygathrix_cinerea.k141_374971                             29629 33 +     56732 A---------TG---A-T-------T----TTT---AAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6806120 33 +   6970761 A---------TG---A-T-------T----TTT---AAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             5514 33 +     18040 A---------TG---A-T-------T----TTT---AAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                15442 32 +     68503 A---------CA---G-C-------A----A-----AAGT-GAG----TCA----G-ATAACT-C---C--AC------A---G---A-A
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13915283 15 +  90463843 -------------------------------------------G----CCA----A-TT-----C---C--TC------A---G---G-G
i Rattus_norvegicus.chr11                               I 13 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1787477 32 +   2252614 A---------TG---A-T-------A----A-----AAGA-ATG----CCA----G-TCAACT-C---C--CC------a---g---a-a
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_1391695                           1742 33 -      1866 A---------TG---A-T-------T----TTT---AAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Rhinopithecus_bieti.k119_1391695                      C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206377399 33 - 206558726 a---------tg---a-t-------t----ttt---aaaat--c----tca----t-tcaaTC-C---C--CC------A---G---A-A
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44856299 33 -  45163003 A---------TG---A-T-------T----TTT---AAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                18968 32 +    109198 A---------TG---A-T-------A----A-----AAGA-ATG----TCA----A-TCAGCT-C---C--TC------A---G---A-A
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       7604 32 +     12214 A---------CA---G-T-------A----A-----AAGT-GAG----TCA----G-ACAACT-C---C--AC------G---G---A-A
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 I 6
s Saimiri_boliviensis.NW_024100938.1                     15672480 33 -  43202129 A---------TG---c-t-------t----ctt---aaaat--g----tca----t-tttatc-c---c--cc------a---g---a-a
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        4397 33 +     34089 A---------TG---C-T-------T----CTT---AAAAT--G----TCA----T-TTTATC-C---C--CC------A---G---A-A
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              4338 33 -     60842 A---------TG---C-T-------T----CTT---AAAAT--G----TCA----T-TTTATC-C---C--CC------A---G---A-A
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              4433 33 +     67014 A---------TG---C-T-------T----CTT---AAAAT--G----TCA----T-TTTATC-C---C--CC------A---G---A-A
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              4411 33 +     60816 A---------TG---C-T-------T----CTT---AAAAT--G----TCA----T-TTTATC-C---C--CC------A---G---A-A
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 4348 33 -     76454 A---------TG---C-T-------T----CTT---AAAAT--G----TCA----T-TTTATC-C---C--CC------A---G---A-A
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17341073 33 -  30362882 A---------TG---C-T-------T----CTT---AAAAT--G----TCA----T-TTTATC-C---C--CC------A---G---A-A
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         20432 33 -     62485 A---------TG---C-T-------T----CTT---AAAAT--G----TCA----T-TTTATC-C---C--CC------A---G---A-A
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   31956 33 -    114521 A---------TG---A-TT-----TA----A------AAA-ACA----CCA----A-TCAACT-C---C-C-A------A---G---A-T
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        3126 33 +     15331 A---------TG---A-T-------T----TTT---AAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       8523 33 +     20762 A---------TG---A-T-------T----TTT---AAAAT--C----TCA----T-TCAGTC-C---C--CC------A---G---A-A
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         118525 33 +    130994 A---------TG---A-T-------T----TTT---AAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           37312 33 +     46263 A---------TG---A-T-------T----TTT---AAAAT--C----TCA----T-TCAGTC-C---C--CC------A---G---A-A
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     30426 33 +     42640 A---------TG---A-T-------T----TTT---AAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        13470 33 +     30600 A---------TG---A-T-------T----TTT---AAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  100012 15 -    120886 -------------------------------------------G----TCA----G-TG-----C---C--TC------T---G---A-A
i Sigmodon_hispidus.SigHis_scaffold_11332               I 13 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            18538 30 +    739146 A---------TG---A-T-------A----A------AGA-ATG----ACA----A-TCAACT-C---C---C------A---T---A-A
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2239468 19 +   2842873 -------------------------------------------A----AAA----G-TA-----TGAAt--cc-----aa---g---a-a
i Spermophilus_dauricus.KZ294190.1                      I 6 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             234455 15 -    276980 A---------TG---A-T-------A----A-----AAGA-ATG----T-----------------------------------------
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 I 17
s Suricata_suricatta.SurSur_flattened_line_20339            27248 17 +     62062 A---------TG---A-T-------AA--CA-----ATGA-ATA----T-----------------------------------------
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 I 14
s Sus_scrofa.CM000824.4                                 189271517 32 + 218635234 A---------TG---A-T-------A----A-----ACGA-TTA----TTA----G-ACAACT-C---T--CC------A---G---A-a
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        14684 33 -  13920577 A---------TG---A-T-------T----TTT---AAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               5703 32 -      6213 A---------TG---A-T-------A----A-----AAGA-ATG----TCA----G-TCAACT-C---C--CC------C---A---A-A
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               14377 35 +     45698 A---------CA---T-T-------A----A-----AAGA-ATG----TCA----G-TTAAGC-C---C--CC------A--CA-ACA-C
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      806793 32 +   1148477 A---------TC---A-T-------A----A-----AAGA-ATG----TCC----A-TCAACT-C---C--CC------A---G---A-A
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  57488 32 +     99546 A---------TC---A-T-------A----A-----AAGA-ATG----TCC----A-TCAACT-C---C--CC------A---G---A-A
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               26211 32 +     42269 A---------TG---A-C-------A----A-----AAAAT--G----TCA----T-TCAATTTC---C--CC------A---G---A-A
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               59527 32 +     65473 A---------TG---A-C-------A----A-----AAAAT--G----TCA----T-TCAATTTC---C--CC------A---G---A-A
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194007527 33 - 194193292 a---------tg---a-t-------t----ttt---taaat--c----tca----t-tcaATC-C---C--CC------A---G---A-A
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  5211 14 +      6782 A---------TG---A-T-------A----A-----AAGA-ATA----------------------------------------------
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 I 16
s Tonatia_saurophila.TonSau_scaffold_3334                  135521 32 -    259118 A---------TG---A-T-------A----A-----AAGA-ATG----TCA----G-TTAACT-T---C--CC------A---G---A-A
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        26630 33 +     38948 A---------TG---A-T-------T----TTT---AAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   20359 33 -     32910 A---------TG---A-T-------T----TTT---AAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      1747 33 -     12939 A---------TG---A-T-------T----TTT---AAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       1682 33 -     14244 A---------TG---A-T-------T----TTT---AAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           43080 33 -     54611 A---------TG---A-T-------T----TTT---AAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                         886 33 -     11566 A---------TG---A-T-------T----TTT---AAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     3058 33 -     15592 A---------TG---A-T-------T----TTT---AAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          1715 33 +     14371 A---------TG---A-T-------T----TTT---AAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  51467 33 +     51589 A---------TG---A-T-------T----TTT---AAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Trachypithecus_leucocephalus.k141_283605              C 0 I 15
s Trachypithecus_melamera.k141_238507                       14648 33 +     14732 A---------TG---A-T-------T----TTT---AAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       5119 33 -     28054 A---------TG---A-T-------T----TTT---AAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44659919 33 -  44834318 A---------TG---A-T-------T----TTT---AAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       2223 33 +     13828 A---------TG---A-T-------T----TTT---AAAAT--C----TCA----T-TCAATC-C---C--CC------A---G---A-A
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   4831 32 +     90398 A---------TA---A-T-------A----A-----AAGA-ATG----TCA----G-ACAACT-C---C--CC------A---G---A-A
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16084580 20 +  31416278 -------------------------------------------------CT----G-ACaacc-a---c--ac------a---aaaaa-a
i Trichechus_manatus.JH594618.1                         I 13 I 1
s Tupaia_chinensis.KB320831.1                             2792594 13 -   3938065 ----------------------------------------------------------CAATC-C---C--TC------A---G---A-A
i Tupaia_chinensis.KB320831.1                           I 15 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    4787 32 +     13056 A---------TG---G-T-------A----A-----AAGA-GTG----TCA----G-TCAATC-C---C--TC------A---G---A-A
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69313086 32 -  96451834 A---------CA---A-T-------A----A-----AAGA-ATG----TCA----G-ACAACt-c---c--cc------a---g---a-g
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                    987 33 +     10241 A---------TG---A-TT-----TA----A------AAA-ACA----CCA----G-TCAACT-A---C-T-C------A---G---A-T
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6514472 15 +  28682327 A---------TG---A-T-------A----A-----AAGA-ATG----T-----------------------------------------
i Ursus_maritimus.KK498671.1                            C 0 I 17
s Varecia_rubra.k141_432109                                  5004 31 -     20643 A---------TG---A-T-------A----A-----AAAA--TG----TCA----T-TTAATC-C---C--AT------A---G---A-A
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             24545 31 -     33872 A---------TG---A-T-------A----A-----AAAA--TG----TCA----T-TTAATC-C---C--AT------A---G---A-A
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1524327 32 -   2331223 A---------TG---A-T-------A----A-----AAGA-ATA----TCA----G-ACAACT-C---C--AC------A---G---A-A
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                137982 13 -    281493 A---------TG---A-T-------A----A-----AAAA---G----T-----------------------------------------
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 I 15
s Xerus_inauris.XerIna_scaffold_7898                       126583 18 -    134049 -------------------------------------------A----AGA----A-TA-----TGAAT--TT-----AA---G---A--
i Xerus_inauris.XerIna_scaffold_7898                    I 3 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        213950 15 -    227762 A---------TG---A-T-------A----A-----AAGA-ATG----T-----------------------------------------
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 I 17
s Zapus_hudsonius.ZapHud_scaffold_64392                     14686 15 -     20485 -------------------------------------------G----TTG----A-TC-----C---C--TC------A---G---A-A
i Zapus_hudsonius.ZapHud_scaffold_64392                 I 22 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           6578 32 -      8775 A---------CA---A-T-------A----A-----AAGA-ATG----TCA----G-ACAACT-C---C--CC------G---G---A-G
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             38964  0 -     47444 C
e Sorex_araneus.JH798170.1                               17750754 3364 -  27805282 I
e Erinaceus_europaeus.JH835290.1                         11534163  4 +  16010500 I
e Hylobates_pileatus_a.tarseq_592                             33391 319 -     60944 I
e Propithecus_coquerelli.NW_012147997.1                    667273 6500 -   2312742 I
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               11561  9 +    209709 G--T--TTAA-G---A----T
s Acinonyx_jubatus.LLWD01000356.1                         2033689  9 +   3721120 a--t--gtaa-g---a----t
i Acinonyx_jubatus.LLWD01000356.1                       I 7 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    112309  9 -    189883 A--T--TTAA-T---A----T
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10657015  9 +  23371972 A--G--TTAA-G---A----T
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 17 I 1
s Ailurus_fulgens.LNAC01000003.1                          7094359  9 -  16596857 A--G--TTAG-G---A----t
i Ailurus_fulgens.LNAC01000003.1                        I 17 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   16597  9 -     22067 A--T--TTAA-G---T----T
i Allactaga_bullata.AllBul_scaffold_70162               I 24 I 3
s Allenopithecus_nigroviridis.k141_2469532                   1052  9 -     60446 A--T--TTAA-G---G----T
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         1775  9 -     29318 A--T--TTAA-G---G----T
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                          710  9 +     38766 A--T--TTAA-G---G----T
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          1669  9 -     80423 A--T--TTAA-G---G----T
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             9967  9 -     18050 A--T--TTAA-T---G----T
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                 11060  9 -     11521 A--T--TTAA-T---G----T
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                             10644  9 -     21359 A--T--TTAA-T---G----T
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                 259  9 +      2129 A--T--TTAA-T---G----T
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          9943  9 -     10438 A--T--TTAA-T---G----T
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            6599  9 +      7047 A--T--TTAA-T---G----T
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             9879  9 +     10410 A--T--TTAA-T---G----T
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            3687  9 -      4927 A--T--TTAA-T---G----T
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3519814  2 +   4113121 t--t-----------------
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      390011  9 -    631301 A--T--TTAA-G---A----A
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            30398  6 +     33004 A--T---T---T---A----T
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 62329  5 +     78111 A--T--TTA------------
i Aotus_azarae.k141_3170768                             C 0 I 2
s Aotus_griseimembra.k141_3275623                            5270  5 +     22701 A--T--TTA------------
i Aotus_griseimembra.k141_3275623                       C 0 I 3
s Aotus_nancymaae.KZ196176.1                              5749227  5 +   9889416 a--t--tta------------
i Aotus_nancymaae.KZ196176.1                            C 0 I 2
s Aotus_trivirgatus.k141_1740727                             5814  5 -    104377 A--T--TTA------------
i Aotus_trivirgatus.k141_1740727                        C 0 I 2
s Aotus_vociferans.k141_718647                               5816  5 +     23246 A--T--TTA------------
i Aotus_vociferans.k141_718647                          C 0 I 2
s Aplodontia_rufa.AprRuf_scaffold_156013                     3410  9 +      5067 A--T--TTAA-A---T----T
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_587554                         753  9 +      9265 A--T--TTTA-A---G----A
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 8420  9 -     29036 A--T--TTAA-G---A----A
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9539074  9 +  39197703 A--T--TTAA-T---G----T
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             60347  9 +     85812 A--T--TTAA-T---G----T
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                11359  9 +     89302 A--T--TTAA-T---G----T
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             15862  9 -     58268 A--T--TTAA-T---G----T
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             63855  9 +    119057 A--T--TTAA-T---G----T
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               5824  9 -     25888 A--T--TTAA-T---G----T
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 6475  9 -     16375 A--T--TTAA-G---G----A
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                                 95  9 +      6337 A--T--TTAA-G---G----A
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26379838  9 +  51448160 a--t--ttaa-t---t----t
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        5069  9 -     13118 a--t--ttaa-t---t----t
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   42882  2 -     72089 T--T-----------------
i Beatragus_hunteri.BeaHun_scaffold_21644               I 5 C 0
s Bison_bison.KN264915.1                                  6559551  6 +   6870073 a--t---t---t---a----t
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138139655  6 - 161108492 a--t---t---t---a----t
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     572192  6 -    998990 a--t---t---t---a----t
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136295388  6 - 158972876 a--t---t---t---a----t
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1232471  6 -   1914593 a--t---t---t---a----t
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               113709  9 -    171031 A--T--TTAA-T---A----T
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 12740  9 +    125063 A--T--TTAA-T---A----T
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                14785  6 -    216513 A--T-----T-T---A----T
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        7325  9 -    134917 A--T--TTAA-T---A----T
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3219255 11 -   8989139 A--T--TTag-g-gaa----t
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           396957 11 -  15254737 A--T--TTAg-g-gaa----t
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2972692 11 +   6889770 A--T--TTag-g-gaa----t
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11519173  9 +  39901454 A--G--TTAA-G---A----T
i CanFam4.chr31                                         I 15 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   14198  9 +     87036 A--G--TTAA-G---A----T
i Canis_lupus_VD.CanFam_VD_scaffold_16982               I 15 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11265840  9 -  35597290 A--g--ttaa-g---a----t
i Canis_lupus_dingo.QKWQ01001993.1                      I 15 C 0
s Canis_lupus_familiaris.chr31                           11088374  9 +  39895921 A--g--ttaa-g---a----t
i Canis_lupus_familiaris.chr31                          I 15 C 0
s Canis_lupus_orion.HG994411.1                           16455389  9 -  44759192 A--g--ttaa-g---a----t
i Canis_lupus_orion.HG994411.1                          I 15 C 0
s Capra_aegagrus.CM003214.1                              21324890  2 + 157394656 t--t-----------------
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135706117  2 - 157403528 t--t-----------------
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          308760  9 +    345090 A--T--TTAT-G---A----C
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               59213  9 +     67245 A--T--CTAA-G---A----A
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   30420 13 +     33760 A--T--TAAA-G---AACTTT
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   158577  9 -    276539 A--T--GTAA-G---T----T
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15786296  9 -  24422027 A--T--TTAA-C---A----C
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15798231  9 -  24440124 A--T--TTAA-C---A----C
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       176422  9 +    436027 A--T--TTAA-C---A----C
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18890562  9 -  29618158 A--T--TTAA-T---G----T
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 8106  9 -     26817 A--T--TTAA-T---G----G
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                12346  9 +     25043 A--T--TTAA-T---G----T
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         7795  9 +     21754 A--T--TTAT-G---G----C
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4363569  9 +   7569818 a--t--ttaa-g---a----t
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         3326  9 -      9338 A--T--TTAA-G---A----T
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6554997  9 +   6739814 A--T--TTAA-G---G----g
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      26474  9 +     60454 A--T--TTAA-G---G----G
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          1679  9 -     21101 A--T--TTAA-G---G----G
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         58989  9 -    107033 A--T--TTAA-G---G----G
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        1881  9 -     17608 A--T--TTAA-G---G----T
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          29376  9 +     30494 A--T--TTAA-G---G----T
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          58222  9 -     59240 A--T--TTAA-G---G----T
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          1923  9 +     16677 A--T--TTAA-G---T----T
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           24081  9 +     35983 A--T--TTAA-G---G----T
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11990609  9 +  12117833 A--T--TTAA-G---G----T
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46477367  9 +  46592721 A--T--TTAA-G---G----T
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      40918  9 -     45581 A--T--TTAA-G---G----T
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       1924  9 +     35577 A--T--TTAA-G---G----T
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        1700  9 -     25661 A--T--TTAA-G---G----T
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        1678  9 -     17744 A--T--TTAA-G---G----T
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        21294  9 +     37128 A--T--TTAA-G---G----T
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           2498 11 -      6963 A--TGTTTAA-G---A----T
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           58760  9 -     68416 A--T--TTAA-G---G----A
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            7804  9 +     13308 A--T--TTAA-G---G----A
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             5363  9 -     18223 A--T--TTAA-T---A----T
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             22386  9 +     25473 A--T--TTAA-T---A----T
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           41421  9 +     57117 A--T--TTAA-T---A----T
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          46100  9 +     54541 A--T--TTAA-T---A----T
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15961460  9 +  43084221 A--T--TTAA-G---A----T
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         70916  9 +    196370 A--T--TTAA-T---A----T
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          15096  9 +     40510 A--T--TTAA-T---A----T
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15138840  9 -  15256731 A--T--TTTA-G---G----T
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      33887  9 -     53260 A--T--TTTA-G---G----T
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101144451  9 + 101219884 a--t--ttaa-g---t----t
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                16184  8 -     21363 T--T---TGA-G---A----C
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           761491  8 +    964067 T--T---TGA-G---A----C
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_3549804              101 11 -       354 TTTT--TTTA-G---A----A
i Chrysochloris_asiatica.ChrAsi_scaffold_3549804        I 18 C 0
s Colobus_angolensis.KN985967.1                          10886217  9 +  10971483 A--T--TTAA-G---G----t
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147664381  9 + 156195979 A--T--TTAA-G---G----T
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            16366  9 +     23629 A--T--TTAA-G---G----T
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60613296 11 +  78930452 a--t--ttaa-g---t--ttt
i Condylura_cristata.JH655880.1                         C 0 I 7
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         39395  9 -     40477 A--T--TTAA-G---A----T
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 278262  9 -    399297 A--T--TTAA-T---A----G
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53028944  9 +  72327488 A--T--TTAA-T---A----G
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_88140              1867  4 +     11655 A--T--TT-------------
i Crocidura_indochinensis.CroInd_scaffold_88140         C 0 I 1
s Cryptoprocta_ferox.CryFer_flattened_line_19014            51715  9 -     70449 A--T--CTAA-G---A----T
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 14 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  207855  9 -    956709 A--T--TTAA-C---A----T
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 30440  9 -     67205 A--T--TTAA-G---A----T
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                17476  9 +     26546 A--T--TTAA-G---A----T
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             58567  9 -    236241 A--T--TTAA-G---A----C
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          183373  9 -   6883506 t--t--ttaa-g---a----t
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16844619  9 +  31942871 A--T--GTAA-G---G----A
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80036516  3 -  96802777 a--t--t--------------
i Delphinapterus_leucas.KZ290064.1                      C 0 I 2
s Desmodus_rotundus.KZ672188.1                           18698488  9 -  18957592 a--t--ttaa-g---a----a
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 322218  9 +    993696 a--t--ttaa-g---a----t
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   2871  9 +    151128 A--T--TTAA-G---A----T
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   156717  9 +    228994 A--T--TTAA-G---A----T
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3656042  7 +   4240102 A--T--TTAA-G---------
i Dipodomys_ordii.KN672545.1                            C 0 I 1
s Dipodomys_stephensi.DipSte_scaffold_44365                 27675  7 +     28912 A--T--TTAA-G---------
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 I 1
s Dolichotis_patagonum.DolPat_scaffold_14102                35817  9 -     73477 G--T--TTAA-G---A----T
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22998221 11 -  44670279 tgtt--ttaa-a---g----g
i Echinops_telfairi.JH980316.1                          I 20 C 0
s Eidolon_helvum.KE772537.1                                 11921  9 +     24177 a--t--ttaa-g---a----t
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1491166  5 +   1727528 a--t---t---t---a-----
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7815635  6 +  15467074 t--t--gtta-----------
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        239491  9 -    369425 A--T--TAAA-T---G----G
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           6604  9 -      7838 A--T--TAAA-C---A----G
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85871878  9 +  99434291 A--G--TTAA-G---A----T
i Enhydra_lutris.KZ291749.1                             I 17 C 0
s Eptesicus_fuscus.JH977687.1                             4703867  9 +   6522550 a--t--ttaa-g---a----t
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5852672  9 -   7175178 a--t--ttaa-g---a----t
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13351175  9 +  41866177 a--t--ttaa-g---a----t
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          12665  9 +     92910 a--t--ttaa-g---a----t
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erythrocebus_patas.Contig8                             48771018  9 -  48907691 A--T--TTAA-G---G----T
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          314722  9 +    330699 A--T--TTAA-T---T----T
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             61176  9 +     89355 A--T--TTAA-T---T----T
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              4814  9 +     13586 A--T--ATAA-G---G----A
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               4747  9 -      6809 A--T--ATAA-G---G----A
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            11220  9 +     36558 A--T--ATAA-G---G----A
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             7542  9 +     60246 A--T--ATAA-G---G----A
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                11020  9 +    109717 A--T--ATAA-G---G----A
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               15404  9 +     16540 A--T--ATAA-G---G----A
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                15678  9 +     27497 A--T--ATAA-G---G----A
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           18134  9 +     26808 A--T--ATAA-G---G----A
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                32871  9 +     46535 A--T--ATAA-G---G----A
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              15592  9 -     29447 A--T--ATAA-G---G----A
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129892648  9 - 159252932 a--t--ttaa-g---a----t
i Felis_catus.CM001386.2                                I 7 C 0
s Felis_catus_fca126.CM031420.1                         129279735  9 - 158578461 a--t--ttaa-g---a----t
i Felis_catus_fca126.CM031420.1                         I 7 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 20880  9 +     52776 A--T--TTAA-G---A----T
i Felis_nigripes.FelNig_flattened_line_8080             I 7 C 0
s Galago_moholi.ctg555                                     210647  9 -    847004 A--T--TTTA-G---G----A
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           13022  9 -     43889 A--T--TTTA-G---G----A
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          10094  9 +     27357 A--T--TTTA-G---G----A
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               155992  9 +    324696 A--T--TTAA-G---A----T
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 I 2
s Giraffa_tippelskirchi.LVKQ01S012154.1                    180963  6 -    189561 a--t---t---t---a----t
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           12788 12 -     18683 A--C--TTAA-GATTA----T
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               5079  9 -     14630 A--T--TTAA-G---A----T
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119652178  9 - 195582420 a--t--ttag-g---a----t
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   77333 12 +    118900 T--C--CTAA-TATTG----T
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         1591  9 +     10286 A--T--TTAA-G---G----A
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                               68  9 -     11661 A--T--TTAA-G---G----A
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             5397  9 +     56096 A--T--TTAA-G---G----A
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        28647  9 -     42470 A--T--TTAA-G---G----A
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        45270  9 -     54384 A--T--TTAA-G---G----A
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              16922  9 +     53719 A--T--TTAA-G---A----T
i Helogale_parvula.HelPar_flattened_line_22962          I 14 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                27162  2 -     91191 T--T-----------------
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2550798  9 +  31725842 A--T--TTAA-G---A----T
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               60341 10 +     73687 -------TAA-G---AGGTTT
i Heterohyrax_brucei.HetBruBak_scaffold_25354           I 119 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              146810  9 +    277961 A--T--TAAA-A---A----A
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      278089  9 -    477199 a--t--ttaa-g---a----t
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              7236  9 -      9143 A--T--TTAA-G---A----T
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      4486  9 -   7690867 A--T--TTAA-G---A----T
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 16993  9 -     67322 A--T--TTAA-G---A----T
i Hyaena_hyaena.HyaHya_flattened_line_20729             I 14 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           18679  9 -    119109 T--T--GTAA-G---A----C
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              4910  9 +      5897 A--T--TTAA-G---A----C
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_624065                               1776  9 +      2112 A--T--TTAA-G---A----T
i Hylobates_agilis.k141_624065                          C 0 C 0
s Hylobates_klossii.k141_466549                             11350  9 +     11537 A--T--TTAA-G---A----T
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14624457  9 -  25970782 A--T--TTAA-G---A----T
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            1711  9 -      2977 A--T--TTAA-G---A----T
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     5854  9 +     22540 A--T--TTTA-G---A----C
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7125569  9 +  13083262 a--t--ttaa-t---t----t
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_5141390                                    102  9 -      3181 A--T--TTAA-G---A----A
i Indri_indri.k141_5141390                              n 9 I 72
s Inia_geoffrensis.IniGeo_flattened_line_66725               8714 10 +     17520 A--T--TTAAGT---T----T
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8565608  8 +  11848649 A--T--ATAA-A---G-----
i Jaculus_jaculus.JH725517.1                            I 24 I 3
s Kogia_breviceps.KogBre_flattened_line_35920               23332  9 +     37189 A--T--TTAA-T---T----T
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          49944  9 -    147782 A--T--TTAA-T---G----T
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   113958  9 -    115756 A--T--TTAA-G---A----T
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258406952  9 - 285822530 A--T--TTAA-G---G----A
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        23703  9 +     39228 A--T--TTAA-G---G----A
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            53087  9 +     63517 A--T--TTAA-G---G----A
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        78346  9 +    116806 A--T--TTAA-G---G----A
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     31342  9 -     33031 A--T--TTAA-G---G----A
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3085686  9 -   3498232 A--G--TTAA-G---A----T
i Leptonychotes_weddellii.KB714749.1                    I 17 C 0
s Lepus_americanus.LepAme_scaffold_62849                    12969  8 +     22452 C--C--CC-A-G---A----T
i Lepus_americanus.LepAme_scaffold_62849                I 2 C 0
s Lipotes_vexillifer.KE558548.1                            135669 10 +   3060487 a--t--ttaatt---t----t
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19248083  9 +  19376315 A--T--TTAA-G---G----T
i Lophocebus_aterrimus.ctg55                            C 0 I 1
s Loris_lydekkerianus.k141_550999                           10407  9 +     84689 A--T--TTTA-G---G----A
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3778157  9 +   6799190 A--T--TTTA-G---G----A
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20593931  7 -  62548349 T--T--T-TA-g---g-----
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11087830  9 +  39895028 A--g--ttaa-g---a----t
i Lycaon_pictus.CM007556.1                              I 15 C 0
s Macaca_arctoides.k141_2201161                             19826  9 +     74745 A--T--TTAA-G---G----G
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12706282  9 +  12821369 A--T--TTAA-G---G----G
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                1927  9 -      3136 A--T--TTAA-G---G----G
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           46744  9 +     63263 A--T--TTAA-G---G----G
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                 1447  9 -      2568 A--T--TTAA-G---G----G
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 2033  9 -      7381 A--T--TTAA-G---G----G
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  45251  9 -     79256 A--T--TTAA-G---G----G
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196035359  9 + 196197964 A--T--TTAA-G---G----G
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11445527  9 +  11645122 A--T--TTAA-G---G----G
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   4198  9 -     46448 A--T--TTAA-G---G----G
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                1870  9 -     13212 A--T--TTAA-G---G----G
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 15551  9 -     55006 A--T--TTAA-G---G----G
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43840668  9 +  43892939 A--T--TTAA-G---G----G
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               16837  9 -     24607 A--T--TTAA-G---G----G
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               4203  9 -     27140 A--T--TTAA-G---G----G
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                701294  9 +    802869 A--T--TTAA-G---A----T
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43437245  9 -  43563597 A--T--TTAA-G---G----T
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4450071  9 -   4543643 A--T--TTAA-G---G----T
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            145324 10 +    252755 a--t-tttaa-g---a----t
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             35401 10 +     58827 a--t-tttaa-g---a----t
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36873410  9 +  64221397 a--t--ttaa-t---t----t
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       64112  9 -    234502 A--T--TTAA-G---A----G
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433              688  9 -     87323 A--A--TTAA-G---A----T
i Mellivora_capensis.MelCap_flattened_line_15433        I 17 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               12447  9 +     15977 A--T--TTAA-T---A----T
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1046653  9 -  26018355 A--T--TTAA-A---A----G
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_227248                      9  4 -      1377 ---------A-T---T----T
i Mesoplodon_bidens.MesBid_scaffold_227248              I 1 C 0
s Microcebus_murinus.CM007691.1                          16509975  9 +  47401472 A--T--TTAA-G---g----a
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  34198 11 -     48017 TGTT--TTCA-A---G----T
i Microgale_talazaci.MicTal_scaffold_34660              I 21 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               22398  9 -     32043 A--T--TTAA-G---A----A
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22819790  9 -  98408828 A--T--TTAA-T---G----G
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8209392  9 +  10048721 a--t--ttaa-g---a----t
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            34046  9 +     45743 A--T--TTAA-G---A----T
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         1798  9 +     29742 A--T--TTAA-G---G----T
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        11199  9 -    104932 A--G--TTAA-G---A----T
i Mirounga_angustirostris.MirAng_flattened_line_8852    I 17 C 0
s Mirza_zaza.k141_226143                                     5361  9 +      8497 A--T--TTAA-G---G----A
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 146104  3 +    154973 A--T--T--------------
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 I 2
s Mormoops_blainvillei.MorMeg_scaffold_2952                160920  9 +    265003 A--T--TTAA-G---A----A
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                   708  6 -     19904 A--T---T---T---A----T
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  144617  9 -    168139 A--T--TTAA-G---A----T
i Mungos_mungo.MunMun_flattened_line_8729               I 14 C 0
s Murina_feae.MurFea_scaffold_2254                          19250  9 -    100666 A--T--TTAA-G---A----T
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70766294  9 +  92629107 a--t--ttta-a---a----t
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75489353  9 +  98207768 G--T--TTTA-A---A----T
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67555581  9 +  89017189 A--T--TTTA-C---A----A
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74330531  9 +  97876770 G--T--TTTA-A---A----T
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             11569 11 +     98495 ---C--TTAA-GATTA----T
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4424058  9 -  28371801 a--g--ttaa-g---a----t
i Mustela_putorius.JH417978.1                           I 17 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     89723  2 -    117718 ---------------A----T
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               967548  9 +   8389877 a--t--ttaa-t---a----t
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5019225  9 +   6462685 a--t--ttaa-g---a----t
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3465129  9 -   3747815 a--t--ttaa-t---a----t
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        10343  9 +     66751 A--T--TTAA-G---A----T
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             4749  9 -      8794 G--T--TTTA-A---A----T
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        I 5 C 0
s Nannospalax_galili.KL201303.1                            118398  9 +    362372 A--C--TTAA-T---A----T
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               8299  9 +     48152 A--T--TTAA-G---G----G
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4484591  9 -  14209539 A--G--TTAA-G---A----T
i Neomonachus_schauinslandi.NINY01007774.1              I 17 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3950719  3 -   4490290 a--t--t--------------
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 I 2
s Noctilio_leporinus.NocLep_scaffold_12062                  49010  9 +     94413 A--T--TTAA-G---A----A
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_220265                             221  9 +      1763 A--T--TTAA-G---A----T
i Nomascus_annamensis.k141_220265                       I 33 C 0
s Nomascus_concolor.k141_226614                              1014  9 -      5092 A--T--TTAA-G---A----T
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_642452                            1797  9 +      2851 A--T--TTAA-G---A----T
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             24732  9 -  18771707 A--T--TTAA-G---A----T
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  2435  9 +      4512 A--T--TTAA-G---A----T
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                30632  8 +   3668941 A--G--TTAA-G---A-----
i Nyctereutes_procyonoides.CAJHUB010000786.1            I 15 C 0
s Nycticebus_bengalensis.LG16                            65566840  2 -  95554990 A--T-----------------
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            3569  2 +      6470 A--T-----------------
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65669174  2 +  89412551 A--T-----------------
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4995731  9 -  23139505 a--g--ctaa-a---t----t
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3685276  9 +  10294119 A--T--TTAA-G---A----T
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             679256  9 -   3126709 a--g--ttaa-g---a----t
i Odobenus_rosmarus.KB229369.1                          I 17 C 0
s Odocoileus_virginianus.KZ101650.1                       1079397  5 +   1425656 a--t---a---t---a-----
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         36691  6 +     78940 a--t---t---t---a----t
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  125043  9 +    145789 A--T--TTAA-T---A----G
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  36844  9 +     62360 A--T--TTAA-T---A----G
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7224401  3 -   7562323 a--t--t--------------
i Orcinus_orca.KB316965.1                               C 0 I 2
s Orycteropus_afer.OryAfe_flattened_line_13509              57242  9 -     66828 A--A--TTAA-G---A----T
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141876007  8 + 163896628 C--C--CC-A-G---A----T
i Oryctolagus_cuniculus.CM000803.1                      I 2 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      307917  9 -    505867 A--g--ttaa-g---a----t
i Otocyon_megalotis.JAEUCK010005121.1                   I 15 C 0
s Otolemur_crassicaudatus.k141_505435                         463  9 -     53940 A--T--TTTA-G---G----A
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18008434  9 -  38779656 a--t--ttta-g---g----a
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134076956  2 - 275406953 t--t-----------------
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      78170  2 +    140051 T--T-----------------
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127574444  9 - 205426864 a--t--ttaa-g---a----t
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120151597  9 - 196562556 a--t--ttaa-g---a----t
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  34033  9 +    295523 A--T--TTAA-G---A----T
i Panthera_onca.PanOnc_flattened_line_1615              I 7 C 0
s Panthera_pardus.KV860323.1                              3637769  9 +  18214204 a--t--ttaa-g---a----t
i Panthera_pardus.KV860323.1                            I 7 C 0
s Panthera_tigris.KE721879.1                              5027442  9 -   6340057 a--t--ttaa-g---a----t
i Panthera_tigris.KE721879.1                            I 7 C 0
s Pantholops_hodgsonii.KE114631.1                         1065816  2 -   1292953 t--t-----------------
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188156033  9 - 188283584 a--t--ttaa-g---g----t
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             4349  9 +      5367 A--T--TTAA-G---G----T
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47513420  9 +  47705337 A--T--TTAA-G---G----T
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 67397  9 -    104429 A--T--TTAA-G---G----T
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    5930  9 +     14967 A--T--TTAA-G---G----T
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 1790  9 -      7628 A--T--TTAA-G---G----T
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    115495  9 -    135482 A--T--TTAA-G---A----T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 I 14 C 0
s Perodicticus_ibeanus.k141_117958                           5155  9 -     23713 A--T--TTTA-G---G----A
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            24467  9 -     27972 A--T--TTTA-G---G----A
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      44290 10 -     45160 A--G--TTAA-G---AA---T
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4950081  9 -   8017169 A--T--TTAA-T---A----G
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    12187  9 -     36578 A--T--TTAA-A---A----T
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            121008  3 -    122454 A--T--T--------------
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 I 2
s Piliocolobus_badius.k141_1987485                           1818  9 -      5908 A--T--TTAA-G---G----T
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       2442  9 -     17985 A--T--TTAA-G---G----T
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            1809  9 +      7694 A--T--TTAA-G---G----T
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26740287  9 +  26888534 a--t--ttaa-g---g----t
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            97167  9 +    112873 A--T--TTAA-G---A----T
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             43417  9 -     61926 A--T--TTAA-T---A----T
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        24848  9 +     78826 A--T--TTAA-T---A----T
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              8797  9 -     15800 A--T--TTAA-T---A----T
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        11995  9 -     16101 A--T--TTAA-T---A----T
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          5304  9 +      9673 A--T--TTAA-T---A----T
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13474300  9 -  19735023 A--T--TTAA-T---A----T
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           13206  9 -     31692 A--T--TTAA-T---A----T
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           5088  9 +     21690 A--T--TTAA-T---T----T
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       22647  9 +     44506 A--T--TTAA-T---A----T
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        22859  9 +     67491 A--T--TTAA-T---A----T
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      13098  9 -     98129 A--T--TTAA-T---A----T
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     22698  9 +    147771 A--T--TTAA-T---A----T
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        22953  9 -     23762 A--T--TTAA-T---A----T
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          3419  9 -     55515 A--T--TTAA-T---A----T
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         22772  9 +    152463 A--T--TTAA-T---A----T
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                        489  9 -    119457 A--T--TTAA-T---A----T
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         12494  9 +    134592 A--T--TTAA-T---A----T
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          23082  9 -     75465 A--T--TTAA-T---A----T
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              186966  9 -    373494 a--t--ttaa-g---a----t
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19807614  9 +  19899266 A--T--TTAA-G---A----T
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               5544  9 -     15069 A--T--TTAA-G---G----G
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              5678  9 +     14865 A--T--TTAA-G---G----G
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                1433 10 -      9567 -------TAA-G---AGGTTT
i Procavia_capensis.ProCapCap_scaffold_149274           I 120 C 0
s Prolemur_simus.MPIZ01000048.1                           6848333  9 +  12164890 A--T--TTAA-G---G----A
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coronatus.k141_1353159                         3391  9 +     11805 A--T--TTAA-G---G----A
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           42733  9 +     52369 A--T--TTAA-G---G----A
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         35119  9 -     44753 A--T--TTAA-G---G----A
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            17043  9 +     27322 A--T--TTAA-G---G----A
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       16679  9 -     53241 A--T--TTAA-G---G----A
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         38944  9 -     48185 A--T--TTAA-G---G----A
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           33998  5 +     77221 --------TA-T---A----A
i Psammomys_obesus.NESX01026517.1                       I 1 C 0
s Pteronotus_parnellii.KE867983.1                            3564  9 -     27784 A--T--TTAA-G---A----C
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        246366  9 -    344369 A--G--TTAA-G---A----T
i Pteronura_brasiliensis.PteBra_flattened_line_1343     I 17 C 0
s Pteropus_alecto.KB031157.1                             13245673  9 -  17261082 a--t--ttaa-g---a----t
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             603623  9 -   3946241 a--t--ttaa-g---a----t
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131534027  9 - 161321710 a--t--ttaa-g---a----t
i Puma_concolor.QAVW01000427.1                          I 7 C 0
s Pygathrix_cinerea.k141_374971                             29662  9 +     56732 A--T--TTAA-G---G----G
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6806153  9 +   6970761 A--T--TTAA-G---G----G
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             5547  9 +     18040 A--T--TTAA-G---G----G
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                15474  5 +     68503 A--T---A---T---A-----
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13915298  9 +  90463843 A--T--TTTA-T---A----C
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1787509  9 +   2252614 a--t--ttaa-g---a----t
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_1391695                           1775  9 -      1866 A--T--TTAA-G---G----G
i Rhinopithecus_bieti.k119_1391695                      C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206377432  9 - 206558726 A--T--TTAA-G---G----G
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44856332  9 -  45163003 A--T--TTAA-G---G----G
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                19000  9 +    109198 A--T--TTAA-G---A----T
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       7642  2 +     12214 T--T-----------------
i Saiga_tatarica.SaiTat_scaffold_82192                  I 6 C 0
s Saimiri_boliviensis.NW_024100938.1                     15672513  9 -  43202129 a--t--ttaa-t---g----t
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        4430  9 +     34089 A--T--TTAA-T---G----T
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              4371  9 -     60842 A--T--TTAA-T---G----T
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              4466  9 +     67014 A--T--TTAA-T---G----T
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              4444  9 +     60816 A--T--TTAA-T---G----T
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 4381  9 -     76454 A--T--TTAA-T---G----T
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17341106  9 -  30362882 A--T--TTAA-T---G----T
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         20465  9 -     62485 A--T--TTAA-T---G----T
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   31989 11 -    114521 A--T--TTAA-G---AA-T-T
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        3159  9 +     15331 A--T--TTAA-G---G----G
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       8556  9 +     20762 A--T--TTAA-G---G----G
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         118558  9 +    130994 A--T--TTAA-G---G----G
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           37345  9 +     46263 A--T--TTAA-G---G----G
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     30459  9 +     42640 A--T--TTAA-G---G----G
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        13503  9 +     30600 A--T--TTAA-G---G----G
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  100027  9 -    120886 A--T--TTAA-T---A----A
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            18568  9 +    739146 A--T--TTAA-G---T----T
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2239487  9 +   2842873 a--t--ttaa-t---t----t
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             234487  9 -    276980 A--G--TTAG-G---A----T
i Spilogale_gracilis.SpiGra_flattened_line_905          I 17 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            27279  9 +     62062 A--T--ATAA-G---A----T
i Suricata_suricatta.SurSur_flattened_line_20339        I 14 C 0
s Sus_scrofa.CM000824.4                                 189271549  9 + 218635234 a--t--ataa-g---t----t
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        14717  9 -  13920577 A--T--TTAA-G---A----T
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               5735  9 -      6213 A--T--TTAA-G---A----T
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               14412  9 +     45698 T--T--TTTA-A---A----T
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      806825  9 +   1148477 A--T--TTAA-G---A----T
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  57520  9 +     99546 A--T--TTAA-G---A----T
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               26243  9 +     42269 A--T--TTAT-G---G----C
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               59559  9 +     65473 A--T--TTAT-G---G----C
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194007560  9 - 194193292 A--T--TTAC-G---G----t
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  5241 10 +      6782 ---TTTTTAA-G---A----T
i Tolypeutes_matacus.TolMat_scaffold_269431             I 16 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  135553  9 -    259118 A--T--TTAA-G---A----A
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        26663  9 +     38948 A--T--TTAA-G---G----G
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   20392  9 -     32910 A--T--TTAA-G---G----G
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      1780  9 -     12939 A--T--TTAA-G---G----G
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       1715  9 -     14244 A--T--TTAA-G---G----G
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           43113  9 -     54611 A--T--TTAA-G---G----G
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                         919  9 -     11566 A--T--TTAA-G---G----G
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     3091  9 -     15592 A--T--TTAA-G---G----G
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          1748  9 +     14371 A--T--TTAA-G---G----G
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                     31  9 +     12481 A--T--TTAA-G---G----T
i Trachypithecus_leucocephalus.k141_381681              n 15 C 0
s Trachypithecus_melamera.k141_238507                       14681  9 +     14732 A--T--TTAA-G---G----G
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       5152  9 -     28054 A--T--GTAA-G---G----G
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44659952  9 -  44834318 A--T--TTAA-G---G----G
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       2256  9 +     13828 A--T--TTAA-G---G----G
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   4863  7 +     90398 A--C--TT---C---A----T
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16084601  6 +  31416278 -------taa-g---a----t
i Trichechus_manatus.JH594618.1                         I 1 C 0
s Tupaia_chinensis.KB320831.1                             2792607  9 -   3938065 A--T--TCAA-G---A----C
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    4819  9 +     13056 A--T--TTAA-G---A----T
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69313118  3 -  96451834 a--t--t--------------
i Tursiops_truncatus.MRVK01000923.1                     C 0 I 2
s Uropsilus_gracilis.UroGra_scaffold_69449                   1020  8 +     10241 A--T--CTAA-G---A-----
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 I 2
s Ursus_maritimus.KK498671.1                              6514504  9 +  28682327 A--G--TTAA-g---t----t
i Ursus_maritimus.KK498671.1                            I 17 C 0
s Varecia_rubra.k141_432109                                  5035  9 -     20643 A--T--TTAA-G---G----A
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             24576  9 -     33872 A--T--TTAA-G---G----A
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1524359 11 -   2331223 A--T--TTAg-g-gaa----t
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                138010  8 -    281493 A--G--TTAA-G---A-----
i Vulpes_lagopus.VulLag_flattened_line_2045             I 15 C 0
s Xerus_inauris.XerIna_scaffold_7898                       126601  2 -    134049 ---------------T----T
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        213982  9 -    227762 A--G--TTAA-G---A----T
i Zalophus_californianus.ZalCal_flattened_line_4097     I 17 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     14701  9 -     20485 A--T--TGAA-A---G----G
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 I 3
s Ziphius_cavirostris.ZipCav_flattened_line_127025           6610  9 -      8775 A--T--TTAA-T---T----T
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             38964  0 -     47444 C
e Sorex_araneus.JH798170.1                               17750754 3364 -  27805282 I
e Erinaceus_europaeus.JH835290.1                         11534163  4 +  16010500 I
e Hylobates_pileatus_a.tarseq_592                             33391 319 -     60944 I
e Propithecus_coquerelli.NW_012147997.1                    667273 6500 -   2312742 I
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               11570 1 +    209709 T
s Allenopithecus_nigroviridis.k141_2469532                   1061 1 -     60446 T
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         1784 1 -     29318 T
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                          719 1 +     38766 T
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          1678 1 -     80423 T
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Cercocebus_atys.KQ010443.1                              6555006 1 +   6739814 t
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      26483 1 +     60454 T
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          1688 1 -     21101 T
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         58998 1 -    107033 T
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        1890 1 -     17608 T
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          29385 1 +     30494 T
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          58231 1 -     59240 T
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          1932 1 +     16677 T
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           24090 1 +     35983 T
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11990618 1 +  12117833 T
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46477376 1 +  46592721 T
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      40927 1 -     45581 T
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       1933 1 +     35577 T
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        1709 1 -     25661 T
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        1687 1 -     17744 T
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        21303 1 +     37128 T
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chlorocebus_aethiops.ctg22                             15138849 1 -  15256731 T
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      33896 1 -     53260 T
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101144460 1 + 101219884 t
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10886226 1 +  10971483 t
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147664390 1 + 156195979 T
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            16375 1 +     23629 T
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Erythrocebus_patas.Contig8                             48771027 1 -  48907691 T
i Erythrocebus_patas.Contig8                            C 0 C 0
s Gorilla_beringei.k141_111300                               5088 1 -     14630 T
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119652187 1 - 195582420 t
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Hoolock_leuconedys.ctg79                                      4495 1 -   7690867 T
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hylobates_abbotti.k141_493872                              4919 1 +      5897 T
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_624065                               1785 1 +      2112 T
i Hylobates_agilis.k141_624065                          C 0 C 0
s Hylobates_klossii.k141_466549                             11359 1 +     11537 T
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14624466 1 -  25970782 T
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            1720 1 -      2977 T
i Hylobates_muelleri.k141_1389047                       C 0 I 1
s Lophocebus_aterrimus.ctg55                             19248093 1 +  19376315 T
i Lophocebus_aterrimus.ctg55                            I 1 C 0
s Macaca_arctoides.k141_2201161                             19835 1 +     74745 T
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12706291 1 +  12821369 T
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                1936 1 -      3136 T
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           46753 1 +     63263 T
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                 1456 1 -      2568 T
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 2042 1 -      7381 T
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  45260 1 -     79256 T
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196035368 1 + 196197964 t
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11445536 1 +  11645122 t
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   4207 1 -     46448 T
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                1879 1 -     13212 T
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 15560 1 -     55006 T
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43840677 1 +  43892939 T
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               16846 1 -     24607 T
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               4212 1 -     27140 T
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43437254 1 -  43563597 T
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4450080 1 -   4543643 T
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         1807 1 +     29742 T
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Nasalis_larvatus.k141_153429                               8308 1 +     48152 T
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Nomascus_annamensis.k141_220265                             230 1 +      1763 T
i Nomascus_annamensis.k141_220265                       C 0 C 0
s Nomascus_concolor.k141_226614                              1023 1 -      5092 T
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_642452                            1806 1 +      2851 T
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             24741 1 -  18771707 T
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  2444 1 +      4512 T
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Pan_paniscus.CM003386.1                               127574453 1 - 205426864 t
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120151606 1 - 196562556 t
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Papio_anubis.CM001492.2                               188156042 1 - 188283584 t
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             4358 1 +      5367 T
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_kindae.k141_5458022                                 67406 1 -    104429 T
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    5939 1 +     14967 T
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 1799 1 -      7628 T
i Papio_ursinus.k141_1345919                            C 0 C 0
s Piliocolobus_badius.k141_1987485                           1827 1 -      5908 T
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       2451 1 -     17985 T
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            1818 1 +      7694 T
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26740296 1 +  26888534 t
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pongo_abelii.NDHI03003816.1                              186975 1 -    373494 t
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19807623 1 +  19899266 T
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               5553 1 -     15069 T
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              5687 1 +     14865 T
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Pygathrix_cinerea.k141_374971                             29671 1 +     56732 T
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6806162 1 +   6970761 T
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             5556 1 +     18040 T
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rhinopithecus_bieti.k119_1391695                           1784 1 -      1866 T
i Rhinopithecus_bieti.k119_1391695                      C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206377441 1 - 206558726 T
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44856341 1 -  45163003 T
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Semnopithecus_entellus.k141_1572367                        3168 1 +     15331 T
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       8565 1 +     20762 T
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         118567 1 +    130994 T
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           37354 1 +     46263 T
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     30468 1 +     42640 T
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        13512 1 +     30600 T
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        14726 1 -  13920577 T
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Trachypithecus_auratus.k141_738098                        26672 1 +     38948 T
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   20401 1 -     32910 T
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      1789 1 -     12939 T
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       1724 1 -     14244 T
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           43122 1 -     54611 T
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                         928 1 -     11566 T
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     3100 1 -     15592 T
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          1757 1 +     14371 T
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                     40 1 +     12481 T
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_238507                       14690 1 +     14732 T
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       5161 1 -     28054 T
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44659961 1 -  44834318 T
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       2265 1 +     13828 T
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
e Eptesicus_fuscus.JH977687.1                             4703876 0 +   6522550 C
e Macroglossus_sobrinus.MacSob_scaffold_879                701303 0 +    802869 C
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             38964 0 -     47444 C
e Petromus_typicus.PetTyp_scaffold_33007                    12196 0 -     36578 C
e Sorex_araneus.JH798170.1                               17750754 3364 -  27805282 I
e Dinomys_branickii.DinBra_scaffold_1996                   156726 0 +    228994 C
e Erinaceus_europaeus.JH835290.1                         11534163 4 +  16010500 I
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           2509 0 -      6963 C
e Aplodontia_rufa.AprRuf_scaffold_156013                     3419 0 +      5067 C
e Oryctolagus_cuniculus.CM000803.1                      141876015 0 + 163896628 C
e Ochotona_princeps.JH802095.1                            4995740 0 -  23139505 C
e Lepus_americanus.LepAme_scaffold_62849                    12977 0 +     22452 C
e Perognathus_longimembris.PerPac_flattened_line_22291      44300 0 -     45160 C
e Dipodomys_stephensi.DipSte_scaffold_44365                 27682 1 +     28912 I
e Dipodomys_ordii.KN672545.1                              3656049 1 +   4240102 I
e Suricata_suricatta.SurSur_flattened_line_20339            27288 0 +     62062 C
e Chrysochloris_asiatica.ChrAsi_scaffold_3549804              112 0 -       354 C
e Ziphius_cavirostris.ZipCav_flattened_line_127025           6619 0 -      8775 C
e Zalophus_californianus.ZalCal_flattened_line_4097        213991 0 -    227762 C
e Vulpes_lagopus.VulLag_flattened_line_2045                138018 0 -    281493 C
e Vicugna_pacos.KN269600.1                                1524370 0 -   2331223 C
e Ursus_maritimus.KK498671.1                              6514513 0 +  28682327 C
e Uropsilus_gracilis.UroGra_scaffold_69449                   1028 2 +     10241 I
e Tursiops_truncatus.MRVK01000923.1                      69313121 2 -  96451834 I
e Trichechus_manatus.JH594618.1                          16084607 0 +  31416278 C
e Tragulus_javanicus.TraJav_scaffold_14717                   4870 0 +     90398 C
e Tonatia_saurophila.TonSau_scaffold_3334                  135562 0 -    259118 C
e Tolypeutes_matacus.TolMat_scaffold_269431                  5251 0 +      6782 C
e Tapirus_terrestris.TapTer_scaffold_14939                  57529 0 +     99546 C
e Tapirus_indicus.TapInd_scaffold_176                      806834 0 +   1148477 C
e Tamandua_tetradactyla.TamTet_scaffold_26877               14421 0 +     45698 C
e Tadarida_brasiliensis.TadBra_scaffold_145589               5744 0 -      6213 C
e Sus_scrofa.CM000824.4                                 189271558 0 + 218635234 C
e Spilogale_gracilis.SpiGra_flattened_line_905             234496 0 -    276980 C
e Solenodon_paradoxus.SolPar_flattened_line_1012            18577 0 +    739146 C
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   32000 0 -    114521 C
e Saiga_tatarica.SaiTat_scaffold_82192                       7644 0 +     12214 C
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                19009 0 +    109198 C
e Rhinolophus_sinicus.LVEH01000179.1                      1787518 0 +   2252614 C
e Rangifer_tarandus.RanTarSib_scaffold_24239                15479 0 +     68503 C
e Puma_concolor.QAVW01000427.1                          131534036 0 - 161321710 C
e Pteropus_vampyrus.KN525959.1                             603632 0 -   3946241 C
e Pteropus_alecto.KB031157.1                             13245682 0 -  17261082 C
e Pteronura_brasiliensis.PteBra_flattened_line_1343        246375 0 -    344369 C
e Pteronotus_parnellii.KE867983.1                            3573 0 -     27784 C
e Procavia_capensis.ProCapCap_scaffold_149274                1443 0 -      9567 C
e Platanista_gangetica.PlaMin_flattened_line_72990           5097 0 +     21690 C
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            97176 0 +    112873 C
e Phocoena_phocoena.PhoPho_flattened_line_11948            121011 2 -    122454 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    115504 0 -    135482 C
e Pantholops_hodgsonii.KE114631.1                         1065818 0 -   1292953 C
e Panthera_tigris.KE721879.1                              5027451 0 -   6340057 C
e Panthera_pardus.KV860323.1                              3637778 0 +  18214204 C
e Panthera_onca.PanOnc_flattened_line_1615                  34042 0 +    295523 C
e Ovis_canadensis.OviCan_scaffold_6251                      78172 0 +    140051 C
e Ovis_aries.CM001582.2                                 134076958 0 - 275406953 C
e Otocyon_megalotis.JAEUCK010005121.1                      307926 0 -    505867 C
e Orycteropus_afer.OryAfe_flattened_line_13509              57251 0 -     66828 C
e Orcinus_orca.KB316965.1                                 7224404 2 -   7562323 I
e Okapia_johnstoni.LVCL01S0017931.1                         36697 0 +     78940 C
e Odocoileus_virginianus.KZ101650.1                       1079402 0 +   1425656 C
e Odobenus_rosmarus.KB229369.1                             679265 0 -   3126709 C
e Nyctereutes_procyonoides.CAJHUB010000786.1                30640 0 +   3668941 C
e Noctilio_leporinus.NocLep_scaffold_12062                  49019 0 +     94413 C
e Neophocaena_asiaeorientalis.KZ688543.1                  3950722 2 -   4490290 I
e Neomonachus_schauinslandi.NINY01007774.1                4484600 0 -  14209539 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             4758 0 -      8794 C
e Myotis_myotis.MyoMyo_scaffold_6123                        10352 0 +     66751 C
e Myotis_lucifugus.GL429887.1                             3465138 0 -   3747815 C
e Myotis_davidii.KB114863.1                               5019234 0 +   6462685 C
e Myotis_brandtii.KE161952.1                               967557 0 +   8389877 C
e Mustela_putorius.JH417978.1                             4424067 0 -  28371801 C
e Murina_feae.MurFea_scaffold_2254                          19259 0 -    100666 C
e Mungos_mungo.MunMun_flattened_line_8729                  144626 0 -    168139 C
e Moschus_moschiferus.MosMos_scaffold_78805                   714 0 -     19904 C
e Mormoops_blainvillei.MorMeg_scaffold_2952                160929 0 +    265003 C
e Monodon_monoceros.MonMon_M_scaffold_5598                 146107 2 +    154973 I
e Mirounga_angustirostris.MirAng_flattened_line_8852        11208 0 -    104932 C
e Miniopterus_schreibersii.MinSch_scaffold_24116            34055 0 +     45743 C
e Miniopterus_natalensis.LDJU01000022.1                   8209401 0 +  10048721 C
e Micronycteris_hirsuta.MicHir_scaffold_37978               22407 0 -     32043 C
e Microgale_talazaci.MicTal_scaffold_34660                  34209 0 -     48017 C
e Mesoplodon_bidens.MesBid_scaffold_227248                     13 0 -      1377 C
e Mellivora_capensis.MelCap_flattened_line_15433              697 0 -     87323 C
e Megaderma_lyra.MegLyr_scaffold_3562                       64121 0 -    234502 C
e Manis_pentadactyla.KN017078.1                             35411 0 +     58827 C
e Manis_javanica.JSZB01003966.1                            145334 0 +    252755 C
e Lycaon_pictus.CM007556.1                               11087839 0 +  39895028 C
e Loxodonta_africana.GL010040.1                          20593938 0 -  62548349 C
e Lipotes_vexillifer.KE558548.1                            135679 0 +   3060487 C
e Leptonychotes_weddellii.KB714749.1                      3085695 0 -   3498232 C
e Lasiurus_borealis.LasBor_scaffold_5102                   113967 0 -    115756 C
e Kogia_breviceps.KogBre_flattened_line_35920               23341 0 +     37189 C
e Inia_geoffrensis.IniGeo_flattened_line_66725               8724 0 +     17520 C
e Hyaena_hyaena.HyaHya_flattened_line_20729                 17002 0 -     67322 C
e Hipposideros_galeritus.HipGal_scaffold_104691              7245 0 -      9143 C
e Hipposideros_armiger.JXIK01001085.1                      278098 0 -    477199 C
e Hippopotamus_amphibius.HipAmp_scaffold_1308              146819 0 +    277961 C
e Heterohyrax_brucei.HetBruBak_scaffold_25354               60351 0 +     73687 C
e Hemitragus_hylocrius.HemHyl_scaffold_16669                27164 0 -     91191 C
e Helogale_parvula.HelPar_flattened_line_22962              16931 0 +     53719 C
e Giraffa_tippelskirchi.LVKQ01S012154.1                    180969 0 -    189561 C
e Felis_nigripes.FelNig_flattened_line_8080                 20889 0 +     52776 C
e Felis_catus_fca126.CM031420.1                         129279744 0 - 158578461 C
e Eubalaena_japonica.EubJap_flattened_line_7756             61185 0 +     89355 C
e Eschrichtius_robustus.EscRob_flattened_line_685          314731 0 +    330699 C
e Equus_przewalskii.ATBW01073585.1                          12674 0 +     92910 C
e Equus_caballus.CM000402.2                              13351184 0 +  41866177 C
e Equus_asinus.JREZ01000062.1                             5852681 0 -   7175178 C
e Enhydra_lutris.KZ291749.1                              85871887 0 +  99434291 C
e Elephantulus_edwardii.JH947210.1                        7815641 0 +  15467074 C
e Elaphurus_davidianus.JRFZ01086400.1                     1491171 0 +   1727528 C
e Eidolon_helvum.KE772537.1                                 11930 0 +     24177 C
e Echinops_telfairi.JH980316.1                           22998232 0 -  44670279 C
e Diceros_bicornis.DicBicMic_scaffold_9545                   2880 0 +    151128 C
e Dicerorhinus_sumatrensis.PEKH010003161.1                 322227 0 +    993696 C
e Desmodus_rotundus.KZ672188.1                           18698497 0 -  18957592 C
e Delphinapterus_leucas.KZ290064.1                       80036519 2 -  96802777 I
e Dasypus_novemcinctus.JH568778.1                          183382 0 -   6883506 C
e Cryptoprocta_ferox.CryFer_flattened_line_19014            51724 0 -     70449 C
e Crocidura_indochinensis.CroInd_scaffold_88140              1871 1 +     11655 I
e Craseonycteris_thonglongyai.CraTho_scaffold_22679         39404 0 -     40477 C
e Condylura_cristata.JH655880.1                          60613307 7 +  78930452 I
e Choloepus_hoffmanni.KN194586.1                           761499 0 +    964067 C
e Choloepus_didactylus.ChoDid_scaffold_36182                16192 0 -     21363 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_160623         3335 0 -      9338 C
e Catagonus_wagneri.CatWag_scaffold_1305                   158586 0 -    276539 C
e Carollia_perspicillata.CarPer_scaffold_4436               59222 0 +     67245 C
e Capra_hircus.CM004562.1                               135706119 0 - 157403528 C
e Capra_aegagrus.CM003214.1                              21324892 0 + 157394656 C
e Canis_lupus_orion.HG994411.1                           16455398 0 -  44759192 C
e Canis_lupus_familiaris.chr31                           11088383 0 +  39895921 C
e Canis_lupus_dingo.QKWQ01001993.1                       11265849 0 -  35597290 C
e Canis_lupus_VD.CanFam_VD_scaffold_16982                   14207 0 +     87036 C
e CanFam4.chr31                                          11519182 0 +  39901454 C
e Camelus_ferus.KB016973.1                                2972703 0 +   6889770 C
e Camelus_dromedarius.KN271192.1                           396968 0 -  15254737 C
e Camelus_bactrianus.KN276303.1                           3219266 0 -   8989139 C
e Bubalus_bubalis.KI419065.1                              1232477 0 -   1914593 C
e Bos_taurus.CM000177.6                                 136295394 0 - 158972876 C
e Bos_mutus.JH883513.1                                     572198 0 -    998990 C
e Bos_indicus.CM003021.1                                138139661 0 - 161108492 C
e Bison_bison.KN264915.1                                  6559557 0 +   6870073 C
e Beatragus_hunteri.BeaHun_scaffold_21644                   42884 0 -     72089 C
e Balaenoptera_bonaerensis.DF502048.1                        5078 0 -     13118 C
e Balaenoptera_acutorostrata.KI537095.1                  26379847 0 +  51448160 C
e Artibeus_jamaicensis.ArtJam_scaffold_41619                 8429 0 -     29036 C
e Antilocapra_americana.AntAmePen_scaffold_42841            30404 0 +     33004 C
e Anoura_caudifer.AnoCau_scaffold_422                      390020 0 -    631301 C
e Ammotragus_lervia.NIVO01013474.1                        3519816 0 +   4113121 C
e Ailurus_fulgens.LNAC01000003.1                          7094368 0 -  16596857 C
e Ailuropoda_melanoleuca.LNAT01000321.1                  10657024 1 +  23371972 I
e Acinonyx_jubatus.LLWD01000356.1                         2033698 0 +   3721120 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           18688 0 -    119109 C
e Glis_glis.GliGli_scaffold_79770                           12800 0 -     18683 C
e Zapus_hudsonius.ZapHud_scaffold_64392                     14710 3 -     20485 I
e Jaculus_jaculus.JH725517.1                              8565616 3 +  11848649 I
e Hylobates_pileatus_a.tarseq_592                             33391 319 -     60944 I
e Allactaga_bullata.AllBul_scaffold_70162                   16606 3 -     22067 I
e Galeopterus_variegatus.GalVar_scaffold_354               156001 2 +    324696 I
e Microtus_ochrogaster.CM001673.1                        22819799 0 -  98408828 C
e Xerus_inauris.XerIna_scaffold_7898                       126603 0 -    134049 C
e Varecia_variegata.k141_775891                             24585 0 -     33872 C
e Varecia_rubra.k141_432109                                  5044 0 -     20643 C
e Tupaia_tana.TupTan_flattened_line_68454                    4828 0 +     13056 C
e Tupaia_chinensis.KB320831.1                             2792616 0 -   3938065 C
e Theropithecus_gelada.CM009951.1                       194007569 0 - 194193292 C
e Tarsius_wallacei.k141_48636                               59568 0 +     65473 C
e Tarsius_lariang.k141_609102                               26252 0 +     42269 C
e Spermophilus_dauricus.KZ294190.1                        2239496 0 +   2842873 C
e Sigmodon_hispidus.SigHis_scaffold_11332                  100036 0 -    120886 C
e Sapajus_macrocephalus.k141_966464                         20474 0 -     62485 C
e Sapajus_apella.ctg10                                   17341115 0 -  30362882 C
e Saimiri_ustus.k141_1282476                                 4390 0 -     76454 C
e Saimiri_sciureus.k141_1947592                              4453 0 +     60816 C
e Saimiri_oerstedii.k141_841116                              4475 0 +     67014 C
e Saimiri_macrodon.k141_2087127                              4380 0 -     60842 C
e Saimiri_cassiquiarensis.k141_808270                        4439 0 +     34089 C
e Saimiri_boliviensis.NW_024100938.1                     15672522 0 -  43202129 C
e Rattus_norvegicus.chr11                                13915307 0 +  90463843 C
e Psammomys_obesus.NESX01026517.1                           34003 0 +     77221 C
e Propithecus_verreauxi.k141_158021                         38953 0 -     48185 C
e Propithecus_tattersalli.k141_907138                       16688 0 -     53241 C
e Propithecus_perrieri.k141_7554                            17052 0 +     27322 C
e Propithecus_edwardsi.k141_1317105                         35128 0 -     44753 C
e Propithecus_diadema.k141_577245                           42742 0 +     52369 C
e Propithecus_coronatus.k141_1353159                         3400 0 +     11805 C
e Propithecus_coquerelli.NW_012147997.1                    667273 6500 -   2312742 I
e Prolemur_simus.MPIZ01000048.1                           6848342 0 +  12164890 C
e Plecturocebus_moloch.k141_890597                          23091 0 -     75465 C
e Plecturocebus_miltoni.k141_841561                         12503 0 +    134592 C
e Plecturocebus_hoffmannsi.k141_985533                        498 0 -    119457 C
e Plecturocebus_grovesi.k141_242819                         22781 0 +    152463 C
e Plecturocebus_dubius.k141_3565563                          3428 0 -     55515 C
e Plecturocebus_cupreus.k141_1223294                        22962 0 -     23762 C
e Plecturocebus_cinerascens.k141_744510                     22707 0 +    147771 C
e Plecturocebus_caligatus.k141_2539816                      13107 0 -     98129 C
e Plecturocebus_brunneus.k141_498086                        22868 0 +     67491 C
e Plecturocebus_bernhardi.k141_959214                       22656 0 +     44506 C
e Pithecia_vanzolinii.k141_831006                           13215 0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13474309 0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          5313 0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        12004 0 -     16101 C
e Pithecia_hirsuta.k141_1152968                              8806 0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        24857 0 +     78826 C
e Pithecia_albicans.k141_991845                             43426 0 -     61926 C
e Peromyscus_maniculatus.KI615518.1                       4950090 0 -   8017169 C
e Perodicticus_potto.k141_713187                            24476 0 -     27972 C
e Perodicticus_ibeanus.k141_117958                           5164 0 -     23713 C
e Papio_hamadryas.Contig15                               47513429 0 +  47705337 C
e Otolemur_garnettii.GL873528.1                          18008443 0 -  38779656 C
e Otolemur_crassicaudatus.k141_505435                         472 0 -     53940 C
e Onychomys_torridus.OnyTor_scaffold_12578                  36853 0 +     62360 C
e Ondatra_zibethicus.OndZib_scaffold_6821                  125052 0 +    145789 C
e Octodon_degus.JH651621.1                                3685285 0 +  10294119 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65669176 0 +  89412551 C
e Nycticebus_coucang.k141_2051882                            3571 0 +      6470 C
e Nycticebus_bengalensis.LG16                            65566842 0 -  95554990 C
e Nannospalax_galili.KL201303.1                            118407 0 +    362372 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     89725 0 -    117718 C
e Muscardinus_avellanarius.MusAve_scaffold_9643             11580 0 +     98495 C
e Mus_spretus.CM004110.1                                 74330540 0 +  97876770 C
e Mus_pahari.LT608305.1                                  67555590 0 +  89017189 C
e Mus_musculus.chr16                                     75489362 0 +  98207768 C
e Mus_caroli.LT608236.1                                  70766303 0 +  92629107 C
e Mirza_zaza.k141_226143                                     5370 0 +      8497 C
e Microcebus_murinus.CM007691.1                          16509984 0 +  47401472 C
e Mesocricetus_auratus.KB708139.1                         1046662 0 -  26018355 C
e Meriones_unguiculatus.MerUng_scaffold_52233               12456 0 +     15977 C
e Marmota_marmota.CZRN01000005.1                         36873419 0 +  64221397 C
e Loris_tardigradus.ctg97                                 3778166 0 +   6799190 C
e Loris_lydekkerianus.k141_550999                           10416 0 +     84689 C
e Lepilemur_septentrionalis.k141_578524                     31351 0 -     33031 C
e Lepilemur_ruficaudatus.k141_617879                        78355 0 +    116806 C
e Lepilemur_dorsalis.k141_134267                            53096 0 +     63517 C
e Lepilemur_ankaranensis.k141_884009                        23712 0 +     39228 C
e Lemur_catta.scaffold_1                                258406961 0 - 285822530 C
e Lagothrix_lagothricha.k141_12968                          49953 0 -    147782 C
e Indri_indri.k141_5141390                                    111 72 -      3181 I
e Ictidomys_tridecemlineatus.JH393315.1                   7125578 0 +  13083262 C
e Hystrix_cristata.HysCri_scaffold_50788                     5863 0 +     22540 C
e Heterocephalus_glaber.JH602058.1                        2550807 0 +  31725842 C
e Hapalemur_occidentalis.k141_797938                        45279 0 -     54384 C
e Hapalemur_meridionalis.k141_186231                        28656 0 -     42470 C
e Hapalemur_griseus.k141_1387522                             5406 0 +     56096 C
e Hapalemur_gilberti.k141_279011                               77 0 -     11661 C
e Hapalemur_alaotrensis.k141_1280836                         1600 0 +     10286 C
e Graphiurus_murinus.GraMur_scaffold_4493                   77345 0 +    118900 C
e Galagoides_demidoff.k141_1769638                          10103 0 +     27357 C
e Galago_senegalensis.k141_964197                           13031 0 -     43889 C
e Galago_moholi.ctg555                                     210656 0 -    847004 C
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I
e Eulemur_sanfordi.k141_186399                              15601 0 -     29447 C
e Eulemur_rufus.k141_1620292                                32880 0 +     46535 C
e Eulemur_rubriventer.k141_411740                           18143 0 +     26808 C
e Eulemur_mongoz.k141_825972                                15687 0 +     27497 C
e Eulemur_macaco.k141_1341545                               15413 0 +     16540 C
e Eulemur_fulvus.k141_653297                                11029 0 +    109717 C
e Eulemur_flavifrons.k141_903901                             7551 0 +     60246 C
e Eulemur_coronatus.k141_3240342                            11229 0 +     36558 C
e Eulemur_collaris.k141_311830                               4756 0 -      6809 C
e Eulemur_albifrons.k141_715837                              4823 0 +     13586 C
e Ellobius_talpinus.LOJH01090055.1                           6613 0 -      7838 C
e Ellobius_lutescens.LOEQ01003611.1                        239500 0 -    369425 C
e Dolichotis_patagonum.DolPat_scaffold_14102                35826 0 -     73477 C
e Daubentonia_madagascariensis.ctg11                     16844628 0 +  31942871 C
e Dasyprocta_punctata.DasPun_flattened_line_634             58576 0 -    236241 C
e Cuniculus_paca.CunPac_flattened_line_16637                17485 0 +     26546 C
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 30449 0 -     67205 C
e Ctenodactylus_gundi.CteGun_scaffold_447                  207864 0 -    956709 C
e Cricetulus_griseus.LT883672.1                          53028953 0 +  72327488 C
e Cricetomys_gambianus.CriGam_scaffold_949                 278271 0 -    399297 C
e Chiropotes_sagulatus.k141_773804                          15105 0 +     40510 C
e Chiropotes_israelita.k141_1189915                         70925 0 +    196370 C
e Chinchilla_lanigera.JH721867.1                         15961469 0 +  43084221 C
e Cheracebus_torquatus.k141_315545                          46109 0 +     54541 C
e Cheracebus_regulus.k141_2128895                           41430 0 +     57117 C
e Cheracebus_lugens.k141_203936                             22395 0 +     25473 C
e Cheracebus_lucifer.k141_619653                             5372 0 -     18223 C
e Cheirogaleus_medius.k141_133808                            7813 0 +     13308 C
e Cheirogaleus_major.k141_1157592                           58769 0 -     68416 C
e Cephalopachus_bancanus.k141_702587                         7804 0 +     21754 C
e Cebus_unicolor.k141_239009                                12355 0 +     25043 C
e Cebus_olivaceus.k141_93739                                 8115 0 -     26817 C
e Cebus_albifrons.Contig22                               18890571 0 -  29618158 C
e Cavia_tschudii.CavTsc_scaffold_488                       176431 0 +    436027 C
e Cavia_porcellus.DS562889.1                             15798240 0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15786305 0 -  24422027 C
e Castor_canadensis.CasCan_scaffold_47037                   30433 0 +     33760 C
e Carlito_syrichta.NW_007248099.1                          308769 0 +    345090 C
e Cacajao_melanocephalus.k141_1160263                        7334 0 -    134917 C
e Cacajao_hosomi.k141_303789                                14791 0 -    216513 C
e Cacajao_calvus.k141_96166                                 12749 0 +    125063 C
e Cacajao_ayresi.k141_724503                               113718 0 -    171031 C
e Avahi_peyrierasi.k141_798820                                104 0 +      6337 C
e Avahi_laniger.k141_2840928                                 6484 0 -     16375 C
e Ateles_paniscus.k141_1631200                               5833 0 -     25888 C
e Ateles_marginatus.k141_899112                             63864 0 +    119057 C
e Ateles_geoffroyi_a.k141_1300742                             15871 0 -     58268 C
e Ateles_chamek.k141_1072810                                11368 0 +     89302 C
e Ateles_belzebuth.k141_1348307                             60356 0 +     85812 C
e Ateles_geoffroyi_b.tarseq_2582                             9539083 0 +  39197703 C
e Arctocebus_calabarensis.k141_587554                         762 0 +      9265 C
e Aotus_vociferans.k141_718647                               5821 2 +     23246 I
e Aotus_trivirgatus.k141_1740727                             5819 2 -    104377 I
e Aotus_nancymaae.KZ196176.1                              5749232 2 +   9889416 I
e Aotus_griseimembra.k141_3275623                            5275 3 +     22701 I
e Aotus_azarae.k141_3170768                                 62334 2 +     78111 I
e Alouatta_puruensis.k141_1284840                            3696 0 -      4927 C
e Alouatta_palliata.k141_1316127                             9888 0 +     10410 C
e Alouatta_nigerrima.k141_2718643                            6608 0 +      7047 C
e Alouatta_macconnelli.k141_1331706                          9952 0 -     10438 C
e Alouatta_juara.k141_1244470                                 268 0 +      2129 C
e Alouatta_discolor.k141_811576                             10653 0 -     21359 C
e Alouatta_caraya.k141_5460                                 11069 0 -     11521 C
e Alouatta_belzebul.k141_1818029                             9976 0 -     18050 C
e Acomys_cahirinus.AcoCah_scaffold_1625                    112318 0 -    189883 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               11571 1 +    209709 T
s Acinonyx_jubatus.LLWD01000356.1                         2033698 1 +   3721120 t
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    112318 1 -    189883 A
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10657025 1 +  23371972 T
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 1 C 0
s Ailurus_fulgens.LNAC01000003.1                          7094368 1 -  16596857 t
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   16609 1 -     22067 T
i Allactaga_bullata.AllBul_scaffold_70162               I 3 C 0
s Allenopithecus_nigroviridis.k141_2469532                   1062 1 -     60446 T
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         1785 1 -     29318 T
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                          720 1 +     38766 T
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          1679 1 -     80423 T
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                             9976 1 -     18050 T
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                 11069 1 -     11521 T
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                             10653 1 -     21359 T
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                 268 1 +      2129 T
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          9952 1 -     10438 G
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            6608 1 +      7047 G
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             9888 1 +     10410 T
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            3696 1 -      4927 T
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3519816 1 +   4113121 t
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      390020 1 -    631301 T
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 I 2
s Antilocapra_americana.AntAmePen_scaffold_42841            30404 1 +     33004 T
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 62336 1 +     78111 T
i Aotus_azarae.k141_3170768                             I 2 C 0
s Aotus_griseimembra.k141_3275623                            5278 1 +     22701 T
i Aotus_griseimembra.k141_3275623                       I 3 C 0
s Aotus_nancymaae.KZ196176.1                              5749234 1 +   9889416 t
i Aotus_nancymaae.KZ196176.1                            I 2 C 0
s Aotus_trivirgatus.k141_1740727                             5821 1 -    104377 T
i Aotus_trivirgatus.k141_1740727                        I 2 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     3419 1 +      5067 T
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_587554                         762 1 +      9265 T
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 8429 1 -     29036 T
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 I 2
s Ateles_geoffroyi_b.tarseq_2582                             9539083 1 +  39197703 T
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             60356 1 +     85812 T
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                11368 1 +     89302 T
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             15871 1 -     58268 T
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             63864 1 +    119057 T
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               5833 1 -     25888 T
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 6484 1 -     16375 T
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                                104 1 +      6337 T
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26379847 1 +  51448160 t
i Balaenoptera_acutorostrata.KI537095.1                 C 0 I 54
s Balaenoptera_bonaerensis.DF502048.1                        5078 1 -     13118 t
i Balaenoptera_bonaerensis.DF502048.1                   C 0 I 15
s Beatragus_hunteri.BeaHun_scaffold_21644                   42884 1 -     72089 T
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6559557 1 +   6870073 t
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138139661 1 - 161108492 t
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     572198 1 -    998990 t
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136295394 1 - 158972876 t
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1232477 1 -   1914593 t
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               113718 1 -    171031 T
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 12749 1 +    125063 T
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                14791 1 -    216513 T
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        7334 1 -    134917 T
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3219266 1 -   8989139 t
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           396968 1 -  15254737 t
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2972703 1 +   6889770 t
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11519182 1 +  39901454 T
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   14207 1 +     87036 T
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11265849 1 -  35597290 t
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11088383 1 +  39895921 t
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16455398 1 -  44759192 t
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21324892 1 + 157394656 t
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135706119 1 - 157403528 t
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          308769 1 +    345090 T
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               59222 1 +     67245 T
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 I 2
s Castor_canadensis.CasCan_scaffold_47037                   30433 1 +     33760 T
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   158586 1 -    276539 T
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15786305 1 -  24422027 T
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15798240 1 -  24440124 T
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       176431 1 +    436027 T
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18890571 1 -  29618158 T
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 8115 1 -     26817 T
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                12355 1 +     25043 T
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         7804 1 +     21754 T
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4363578 1 +   7569818 t
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         3335 1 -      9338 T
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6555007 1 +   6739814 t
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      26484 1 +     60454 T
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          1689 1 -     21101 T
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         58999 1 -    107033 T
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        1891 1 -     17608 T
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          29386 1 +     30494 T
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          58232 1 -     59240 T
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          1933 1 +     16677 T
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           24091 1 +     35983 T
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11990619 1 +  12117833 T
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46477377 1 +  46592721 T
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      40928 1 -     45581 T
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       1934 1 +     35577 T
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        1710 1 -     25661 T
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        1688 1 -     17744 T
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        21304 1 +     37128 T
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           2509 1 -      6963 G
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           58769 1 -     68416 T
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            7813 1 +     13308 T
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             5372 1 -     18223 T
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             22395 1 +     25473 T
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           41430 1 +     57117 T
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          46109 1 +     54541 T
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15961469 1 +  43084221 G
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chlorocebus_aethiops.ctg22                             15138850 1 -  15256731 T
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      33897 1 -     53260 T
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101144461 1 + 101219884 t
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                16192 1 -     21363 A
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 I 2
s Choloepus_hoffmanni.KN194586.1                           761499 1 +    964067 A
i Choloepus_hoffmanni.KN194586.1                        C 0 I 2
s Chrysochloris_asiatica.ChrAsi_scaffold_3549804              112 1 -       354 T
i Chrysochloris_asiatica.ChrAsi_scaffold_3549804        C 0 C 0
s Colobus_angolensis.KN985967.1                          10886227 1 +  10971483 t
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147664391 1 + 156195979 T
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            16376 1 +     23629 T
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60613314 1 +  78930452 t
i Condylura_cristata.JH655880.1                         I 7 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         39404 1 -     40477 T
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 I 1
s Cricetomys_gambianus.CriGam_scaffold_949                 278271 1 -    399297 A
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53028953 1 +  72327488 A
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_88140              1872 1 +     11655 A
i Crocidura_indochinensis.CroInd_scaffold_88140         I 1 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            51724 1 -     70449 T
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  207864 1 -    956709 T
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 30449 1 -     67205 G
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                17485 1 +     26546 G
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             58576 1 -    236241 A
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          183382 1 -   6883506 g
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16844628 1 +  31942871 T
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80036521 1 -  96802777 t
i Delphinapterus_leucas.KZ290064.1                      I 2 I 3
s Desmodus_rotundus.KZ672188.1                           18698497 1 -  18957592 t
i Desmodus_rotundus.KZ672188.1                          C 0 I 4
s Dicerorhinus_sumatrensis.PEKH010003161.1                 322227 1 +    993696 t
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   2880 1 +    151128 T
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   156726 1 +    228994 G
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3656050 1 +   4240102 T
i Dipodomys_ordii.KN672545.1                            I 1 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 27683 1 +     28912 T
i Dipodomys_stephensi.DipSte_scaffold_44365             I 1 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                35826 1 -     73477 G
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22998232 1 -  44670279 t
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 11930 1 +     24177 t
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7815641 1 +  15467074 t
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        239500 1 -    369425 A
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           6613 1 -      7838 A
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85871887 1 +  99434291 T
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4703876 1 +   6522550 a
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5852681 1 -   7175178 t
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13351184 1 +  41866177 t
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          12674 1 +     92910 t
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erythrocebus_patas.Contig8                             48771028 1 -  48907691 T
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          314731 1 +    330699 T
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 I 9
s Eubalaena_japonica.EubJap_flattened_line_7756             61185 1 +     89355 T
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 I 7
s Eulemur_albifrons.k141_715837                              4823 1 +     13586 T
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               4756 1 -      6809 T
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            11229 1 +     36558 T
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             7551 1 +     60246 T
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                11029 1 +    109717 T
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               15413 1 +     16540 T
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                15687 1 +     27497 T
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           18143 1 +     26808 T
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                32880 1 +     46535 T
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              15601 1 -     29447 T
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129892657 1 - 159252932 t
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129279744 1 - 158578461 t
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 20889 1 +     52776 T
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Galago_moholi.ctg555                                     210656 1 -    847004 T
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           13031 1 -     43889 T
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          10103 1 +     27357 T
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               156003 1 +    324696 G
i Galeopterus_variegatus.GalVar_scaffold_354            I 2 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    180969 1 -    189561 t
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           12800 1 -     18683 T
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               5089 1 -     14630 T
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119652188 1 - 195582420 t
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   77345 1 +    118900 T
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         1600 1 +     10286 T
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                               77 1 -     11661 T
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             5406 1 +     56096 T
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        28656 1 -     42470 T
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        45279 1 -     54384 T
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              16931 1 +     53719 T
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                27164 1 -     91191 T
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2550807 1 +  31725842 G
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               60351 1 +     73687 T
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              146819 1 +    277961 A
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      278098 1 -    477199 t
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              7245 1 -      9143 T
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 I 3
s Hoolock_leuconedys.ctg79                                      4496 1 -   7690867 T
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 17002 1 -     67322 T
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           18688 1 -    119109 A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              4920 1 +      5897 T
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_624065                               1786 1 +      2112 T
i Hylobates_agilis.k141_624065                          C 0 C 0
s Hylobates_klossii.k141_466549                             11360 1 +     11537 T
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14624467 1 -  25970782 T
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            1722 1 -      2977 T
i Hylobates_muelleri.k141_1389047                       I 1 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     5863 1 +     22540 G
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7125578 1 +  13083262 t
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 I 1
s Indri_indri.k141_4418183                                   1249 1 -      1457 T
i Indri_indri.k141_4418183                              I 9 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               8724 1 +     17520 T
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 I 5
s Jaculus_jaculus.JH725517.1                              8565619 1 +  11848649 T
i Jaculus_jaculus.JH725517.1                            I 3 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               23341 1 +     37189 T
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 I 6
s Lagothrix_lagothricha.k141_12968                          49953 1 -    147782 T
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   113967 1 -    115756 A
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258406961 1 - 285822530 T
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        23712 1 +     39228 T
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            53096 1 +     63517 T
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        78355 1 +    116806 T
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     31351 1 -     33031 T
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3085695 1 -   3498232 T
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lipotes_vexillifer.KE558548.1                            135679 1 +   3060487 t
i Lipotes_vexillifer.KE558548.1                         C 0 I 6
s Lophocebus_aterrimus.ctg55                             19248094 1 +  19376315 T
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           10416 1 +     84689 T
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3778166 1 +   6799190 T
i Loris_tardigradus.ctg97                               C 0 C 0
s Lycaon_pictus.CM007556.1                               11087839 1 +  39895028 t
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             19836 1 +     74745 T
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12706292 1 +  12821369 T
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                1937 1 -      3136 T
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           46754 1 +     63263 T
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                 1457 1 -      2568 T
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 2043 1 -      7381 T
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  45261 1 -     79256 T
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196035369 1 + 196197964 t
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11445537 1 +  11645122 t
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   4208 1 -     46448 T
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                1880 1 -     13212 T
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 15561 1 -     55006 T
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43840678 1 +  43892939 T
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               16847 1 -     24607 T
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               4213 1 -     27140 T
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                701303 1 +    802869 T
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43437255 1 -  43563597 T
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4450081 1 -   4543643 T
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            145334 1 +    252755 t
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             35411 1 +     58827 t
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36873419 1 +  64221397 t
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       64121 1 -    234502 T
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433              697 1 -     87323 T
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               12456 1 +     15977 T
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1046662 1 -  26018355 A
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_227248                     13 1 -      1377 T
i Mesoplodon_bidens.MesBid_scaffold_227248              C 0 I 6
s Microcebus_murinus.CM007691.1                          16509984 1 +  47401472 t
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  34209 1 -     48017 T
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               22407 1 -     32043 T
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 I 3
s Microtus_ochrogaster.CM001673.1                        22819799 1 -  98408828 A
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8209401 1 +  10048721 t
i Miniopterus_natalensis.LDJU01000022.1                 C 0 I 1
s Miniopterus_schreibersii.MinSch_scaffold_24116            34055 1 +     45743 T
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 I 1
s Miopithecus_ogouensis.k141_2935907                         1808 1 +     29742 T
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        11208 1 -    104932 T
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     5370 1 +      8497 T
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 146109 1 +    154973 T
i Monodon_monoceros.MonMon_M_scaffold_5598              I 2 I 5
s Mormoops_blainvillei.MorMeg_scaffold_2952                160929 1 +    265003 T
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 I 1
s Moschus_moschiferus.MosMos_scaffold_78805                   714 1 -     19904 T
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  144626 1 -    168139 T
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          19259 1 -    100666 A
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70766303 1 +  92629107 a
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75489362 1 +  98207768 A
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67555590 1 +  89017189 A
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74330540 1 +  97876770 A
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             11580 1 +     98495 T
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4424067 1 -  28371801 t
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     89725 1 -    117718 G
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               967557 1 +   8389877 a
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5019234 1 +   6462685 a
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3465138 1 -   3747815 a
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        10352 1 +     66751 A
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             4758 1 -      8794 G
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 I 2
s Nannospalax_galili.KL201303.1                            118407 1 +    362372 G
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               8309 1 +     48152 T
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4484600 1 -  14209539 T
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3950724 1 -   4490290 t
i Neophocaena_asiaeorientalis.KZ688543.1                I 2 I 2
s Noctilio_leporinus.NocLep_scaffold_12062                  49019 1 +     94413 T
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_220265                             231 1 +      1763 T
i Nomascus_annamensis.k141_220265                       C 0 C 0
s Nomascus_concolor.k141_226614                              1024 1 -      5092 T
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_642452                            1807 1 +      2851 T
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             24742 1 -  18771707 T
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  2445 1 +      4512 T
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                30640 1 +   3668941 T
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Ochotona_princeps.JH802095.1                            4995740 1 -  23139505 t
i Ochotona_princeps.JH802095.1                          C 0 I 1
s Octodon_degus.JH651621.1                                3685285 1 +  10294119 G
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             679265 1 -   3126709 t
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         36697 1 +     78940 t
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  125052 1 +    145789 A
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  36853 1 +     62360 A
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7224406 1 -   7562323 t
i Orcinus_orca.KB316965.1                               I 2 I 5
s Orycteropus_afer.OryAfe_flattened_line_13509              57251 1 -     66828 T
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      307926 1 -    505867 t
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                         472 1 -     53940 T
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18008443 1 -  38779656 t
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134076958 1 - 275406953 t
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      78172 1 +    140051 T
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127574454 1 - 205426864 t
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120151607 1 - 196562556 t
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  34042 1 +    295523 T
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3637778 1 +  18214204 t
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5027451 1 -   6340057 t
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1065818 1 -   1292953 t
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188156043 1 - 188283584 t
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             4359 1 +      5367 T
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_kindae.k141_5458022                                 67407 1 -    104429 T
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    5940 1 +     14967 T
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 1800 1 -      7628 T
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    115504 1 -    135482 T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 I 1
s Perodicticus_ibeanus.k141_117958                           5164 1 -     23713 T
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            24476 1 -     27972 T
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      44300 1 -     45160 T
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4950090 1 -   8017169 A
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    12196 1 -     36578 G
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            121013 1 -    122454 T
i Phocoena_phocoena.PhoPho_flattened_line_11948         I 2 I 3
s Piliocolobus_badius.k141_1987485                           1828 1 -      5908 T
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       2452 1 -     17985 T
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            1819 1 +      7694 T
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26740297 1 +  26888534 t
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            97176 1 +    112873 A
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             43426 1 -     61926 T
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        24857 1 +     78826 T
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              8806 1 -     15800 T
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        12004 1 -     16101 T
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          5313 1 +      9673 T
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13474309 1 -  19735023 T
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           13215 1 -     31692 T
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           5097 1 +     21690 T
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 I 6
s Plecturocebus_brunneus.k141_498086                        22868 1 +     67491 T
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      13107 1 -     98129 T
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     22707 1 +    147771 T
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        22962 1 -     23762 T
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          3428 1 -     55515 T
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         22781 1 +    152463 T
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                        498 1 -    119457 T
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         12503 1 +    134592 T
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          23091 1 -     75465 T
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              186976 1 -    373494 t
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19807624 1 +  19899266 T
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               5554 1 -     15069 T
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              5688 1 +     14865 T
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                1443 1 -      9567 T
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6848342 1 +  12164890 T
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coronatus.k141_1353159                         3400 1 +     11805 T
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           42742 1 +     52369 T
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         35128 1 -     44753 T
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            17052 1 +     27322 T
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       16688 1 -     53241 T
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         38953 1 -     48185 T
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           34003 1 +     77221 A
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            3573 1 -     27784 T
i Pteronotus_parnellii.KE867983.1                       C 0 I 1
s Pteronura_brasiliensis.PteBra_flattened_line_1343        246375 1 -    344369 T
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13245682 1 -  17261082 t
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             603632 1 -   3946241 t
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131534036 1 - 161321710 t
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             29672 1 +     56732 T
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6806163 1 +   6970761 T
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             5557 1 +     18040 T
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rattus_norvegicus.chr11                                13915307 1 +  90463843 A
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1787518 1 +   2252614 t
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_1391695                           1785 1 -      1866 T
i Rhinopithecus_bieti.k119_1391695                      C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206377442 1 - 206558726 T
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44856342 1 -  45163003 T
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                19009 1 +    109198 T
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       7644 1 +     12214 T
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15672522 1 -  43202129 t
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        4439 1 +     34089 T
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              4380 1 -     60842 T
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              4475 1 +     67014 T
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              4453 1 +     60816 T
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 4390 1 -     76454 T
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17341115 1 -  30362882 T
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         20474 1 -     62485 T
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   32000 1 -    114521 T
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        3169 1 +     15331 T
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       8566 1 +     20762 T
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         118568 1 +    130994 T
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           37355 1 +     46263 T
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     30469 1 +     42640 T
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        13513 1 +     30600 T
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  100036 1 -    120886 G
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            18577 1 +    739146 T
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             234496 1 -    276980 T
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            27288 1 +     62062 T
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189271558 1 + 218635234 t
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        14727 1 -  13920577 T
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               5744 1 -      6213 T
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               14421 1 +     45698 G
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 I 2
s Tapirus_indicus.TapInd_scaffold_176                      806834 1 +   1148477 A
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  57529 1 +     99546 A
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               26252 1 +     42269 T
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               59568 1 +     65473 T
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194007569 1 - 194193292 t
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  5251 1 +      6782 G
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  135562 1 -    259118 T
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 I 2
s Trachypithecus_auratus.k141_738098                        26673 1 +     38948 G
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   20402 1 -     32910 T
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      1790 1 -     12939 G
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_geei.k141_670367                           43123 1 -     54611 T
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                         929 1 -     11566 G
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     3101 1 -     15592 T
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          1758 1 +     14371 T
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_melamera.k141_238507                       14691 1 +     14732 T
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       5162 1 -     28054 T
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44659962 1 -  44834318 T
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       2266 1 +     13828 T
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   4870 1 +     90398 T
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16084607 1 +  31416278 t
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2792616 1 -   3938065 T
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    4828 1 +     13056 T
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69313123 1 -  96451834 t
i Tursiops_truncatus.MRVK01000923.1                     I 2 I 3
s Uropsilus_gracilis.UroGra_scaffold_69449                   1030 1 +     10241 T
i Uropsilus_gracilis.UroGra_scaffold_69449              I 2 C 0
s Ursus_maritimus.KK498671.1                              6514513 1 +  28682327 t
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  5044 1 -     20643 T
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             24585 1 -     33872 T
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1524370 1 -   2331223 t
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                138018 1 -    281493 T
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       126603 1 -    134049 T
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        213991 1 -    227762 T
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     14713 1 -     20485 T
i Zapus_hudsonius.ZapHud_scaffold_64392                 I 3 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           6619 1 -      8775 T
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 I 5
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             38964 0 -     47444 C
e Sorex_araneus.JH798170.1                               17750754 3364 -  27805282 I
e Erinaceus_europaeus.JH835290.1                         11534163 4 +  16010500 I
e Oryctolagus_cuniculus.CM000803.1                      141876015 0 + 163896628 C
e Lepus_americanus.LepAme_scaffold_62849                    12977 0 +     22452 C
e Rangifer_tarandus.RanTarSib_scaffold_24239                15479 0 +     68503 C
e Odocoileus_virginianus.KZ101650.1                       1079402 0 +   1425656 C
e Loxodonta_africana.GL010040.1                          20593938 0 -  62548349 C
e Elaphurus_davidianus.JRFZ01086400.1                     1491171 0 +   1727528 C
e Hylobates_pileatus_a.tarseq_592                             33391 319 -     60944 I
e Trachypithecus_leucocephalus.k141_381681                     41 0 +     12481 C
e Trachypithecus_francoisi.k141_768164                       1725 0 -     14244 C
e Spermophilus_dauricus.KZ294190.1                        2239496 0 +   2842873 C
e Propithecus_coquerelli.NW_012147997.1                    667273 6500 -   2312742 I
e Plecturocebus_bernhardi.k141_959214                       22656 0 +     44506 C
e Papio_hamadryas.Contig15                               47513429 0 +  47705337 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65669176 0 +  89412551 C
e Nycticebus_coucang.k141_2051882                            3571 0 +      6470 C
e Nycticebus_bengalensis.LG16                            65566842 0 -  95554990 C
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I
e Chiropotes_sagulatus.k141_773804                          15105 0 +     40510 C
e Chiropotes_israelita.k141_1189915                         70925 0 +    196370 C
e Aotus_vociferans.k141_718647                               5821 2 +     23246 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               11572  5 +    209709 T-T--T-T-----T
s Acinonyx_jubatus.LLWD01000356.1                         2033699  8 +   3721120 t-t--t-t--ccta
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    112319  5 -    189883 -----T-TTC---A
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10657026  8 +  23371972 T-T--T-TTCC--A
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7094369  8 -  16596857 t-t--t-t--tcca
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   16610  5 -     22067 -----T-TTC---A
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   1063  2 -     60446 T-T-----------
i Allenopithecus_nigroviridis.k141_2469532              C 0 I 3
s Allochrocebus_lhoesti.k141_3566948                         1786  2 -     29318 T-T-----------
i Allochrocebus_lhoesti.k141_3566948                    C 0 I 2
s Allochrocebus_preussi.k141_1108977                          721  2 +     38766 T-T-----------
i Allochrocebus_preussi.k141_1108977                    C 0 I 2
s Allochrocebus_solatus.k141_371672                          1680  2 -     80423 T-T-----------
i Allochrocebus_solatus.k141_371672                     C 0 I 2
s Alouatta_belzebul.k141_1818029                             9977  3 -     18050 T-T--T--------
i Alouatta_belzebul.k141_1818029                        C 0 I 1
s Alouatta_caraya.k141_5460                                 11070  3 -     11521 T-T--T--------
i Alouatta_caraya.k141_5460                             C 0 I 1
s Alouatta_discolor.k141_811576                             10654  3 -     21359 T-T--T--------
i Alouatta_discolor.k141_811576                         C 0 I 1
s Alouatta_juara.k141_1244470                                 269  3 +      2129 T-T--T--------
i Alouatta_juara.k141_1244470                           C 0 I 1
s Alouatta_macconnelli.k141_1331706                          9953  3 -     10438 T-T--T--------
i Alouatta_macconnelli.k141_1331706                     C 0 I 1
s Alouatta_nigerrima.k141_2718643                            6609  3 +      7047 T-T--T--------
i Alouatta_nigerrima.k141_2718643                       C 0 I 1
s Alouatta_palliata.k141_1316127                             9889  3 +     10410 T-T--T--------
i Alouatta_palliata.k141_1316127                        C 0 I 1
s Alouatta_puruensis.k141_1284840                            3697  3 -      4927 T-T--T--------
i Alouatta_puruensis.k141_1284840                       C 0 I 1
s Ammotragus_lervia.NIVO01013474.1                        3519817  7 +   4113121 t-tt-t-t----aa
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      390023  8 -    631301 T-T--T-TTTC--A
i Anoura_caudifer.AnoCau_scaffold_422                   I 2 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            30405  6 +     33004 T-T--T-A----AA
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 62337  4 +     78111 T-T--T-T------
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            5279  5 +     22701 T-T-TT-T------
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5749235  5 +   9889416 t-t--ttt------
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             5822  4 -    104377 T-T--T-T------
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               5823  5 +     23246 T-T-TT-T------
i Aotus_vociferans.k141_718647                          I 2 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     3420  2 +      5067 -----T-T------
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 I 2
s Arctocebus_calabarensis.k141_587554                         763  2 +      9265 T-T-----------
i Arctocebus_calabarensis.k141_587554                   C 0 I 2
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 8432  2 -     29036 T-T-----------
i Artibeus_jamaicensis.ArtJam_scaffold_41619            I 2 I 5
s Ateles_geoffroyi_b.tarseq_2582                             9539084  3 +  39197703 T-T--T--------
i Ateles_geoffroyi_b.tarseq_2582                           C 0 I 1
s Ateles_belzebuth.k141_1348307                             60357  3 +     85812 T-T--T--------
i Ateles_belzebuth.k141_1348307                         C 0 I 1
s Ateles_chamek.k141_1072810                                11369  3 +     89302 T-T--T--------
i Ateles_chamek.k141_1072810                            C 0 I 1
s Ateles_geoffroyi_a.k141_1300742                             15872  3 -     58268 T-T--T--------
i Ateles_geoffroyi_a.k141_1300742                         C 0 I 1
s Ateles_marginatus.k141_899112                             63865  3 +    119057 T-T--T--------
i Ateles_marginatus.k141_899112                         C 0 I 1
s Ateles_paniscus.k141_1631200                               5834  3 -     25888 T-T--T--------
i Ateles_paniscus.k141_1631200                          C 0 I 1
s Avahi_laniger.k141_2840928                                 6485  5 -     16375 T-T--T-T-----A
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                                105  5 +      6337 T-T--T-T-----A
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26379902  6 +  51448160 t-t--t-t----ta
i Balaenoptera_acutorostrata.KI537095.1                 I 54 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   42885  7 -     72089 T-T-TT-T----AA
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6559558  7 +   6870073 t-tt-t-t----aa
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138139662  7 - 161108492 t-tt-t-t----aa
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     572199  8 -    998990 t-tttt-t----aa
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136295395  7 - 158972876 t-tt-t-t----aa
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1232478  7 -   1914593 t-tt-t-t----aa
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               113719  5 -    171031 T-T--T-T-----T
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 12750  5 +    125063 T-T--T-T-----T
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                14792  5 -    216513 T-T--T-T-----T
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        7335  5 -    134917 T-T--T-T-----T
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3219267  7 -   8989139 t-t--t-t---taa
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           396969  7 -  15254737 t-t--t-t---taa
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2972704  7 +   6889770 t-t--t-t---taa
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11519183 10 +  39901454 T-T--T-TCCCCCA
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   14208 10 +     87036 T-T--T-TCCCCCA
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11265850 10 -  35597290 t-t--t-tccccca
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11088384 10 +  39895921 t-t--t-tccccca
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16455399 10 -  44759192 t-t--t-tccccca
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21324893  7 + 157394656 t-tt-t-t----aa
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135706120  7 - 157403528 t-tt-t-t----aa
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          308770  5 +    345090 T-T--T-C-----A
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               59225  8 +     67245 T-T--T-TTTC--A
i Carollia_perspicillata.CarPer_scaffold_4436           I 2 C 0
s Castor_canadensis.CasCan_scaffold_47037                   30434  5 +     33760 -----T-T---TAA
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   158587  5 -    276539 T-T--T-T-----A
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 I 1
s Cavia_aperea.AVPZ01000278.1                            15786306  5 -  24422027 -----T-TTC---a
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15798241  5 -  24440124 -----T-TTC---a
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       176432  5 +    436027 -----T-TTC---A
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18890572  4 -  29618158 T-T--T-T------
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 8116  4 -     26817 T-T--T-T------
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                12356  4 +     25043 T-T--T-T------
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         7805  5 +     21754 T-T--T-C-----A
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4363579  9 +   7569818 t-tt-t-t--ttca
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         3336  9 -      9338 T-T-TT-TTTC--A
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6555008  5 +   6739814 t-t--t-t-----t
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      26485  5 +     60454 T-T--T-T-----T
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          1690  5 -     21101 T-T--T-T-----T
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         59000  5 -    107033 T-T--T-T-----T
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        1892  5 -     17608 T-T--T-T-----T
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          29387  5 +     30494 T-T--T-T-----T
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          58233  5 -     59240 T-T--T-T-----T
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          1934  5 +     16677 T-T--T-T-----T
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           24092  5 +     35983 T-T--T-T-----T
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11990620  5 +  12117833 T-T--T-T-----T
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46477378  5 +  46592721 T-T--T-T-----T
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      40929  5 -     45581 T-T--T-T-----T
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       1935  5 +     35577 T-T--T-T-----T
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        1711  5 -     25661 T-T--T-T-----T
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        1689  5 -     17744 T-T--T-T-----T
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        21305  5 +     37128 T-T--T-T-----T
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           2510  6 -      6963 T-T--T-T----AA
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           58770  5 -     68416 T-T--T-T-----A
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            7814  5 +     13308 T-T--T-T-----A
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             5373  5 -     18223 T-T--T-T-----T
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             22396  5 +     25473 T-T--T-T-----T
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           41431  5 +     57117 T-T--T-T-----T
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          46110  5 +     54541 T-T--T-T-----T
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15961470  5 +  43084221 -----T-T---TGA
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         70925  5 +    196370 T-T--T-T-----T
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          15105  5 +     40510 T-T--T-T-----T
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                16195  3 -     21363 -------T----AA
i Choloepus_didactylus.ChoDid_scaffold_36182            I 2 C 0
s Choloepus_hoffmanni.KN194586.1                           761502  3 +    964067 -------T----AA
i Choloepus_hoffmanni.KN194586.1                        I 2 C 0
s Chlorocebus_aethiops.ctg22                             15138851  2 -  15256731 T-T-----------
i Chlorocebus_aethiops.ctg22                            C 0 I 2
s Chlorocebus_pygerythrus.k141_1486215                      33898  2 -     53260 T-T-----------
i Chlorocebus_pygerythrus.k141_1486215                  C 0 I 2
s Chlorocebus_sabaeus.CM001963.2                        101144462  2 + 101219884 t-t-----------
i Chlorocebus_sabaeus.CM001963.2                        C 0 I 2
s Chrysochloris_asiatica.ChrAsi_scaffold_3549804              113 10 -       354 G-T--T-TTACACA
i Chrysochloris_asiatica.ChrAsi_scaffold_3549804        C 0 C 0
s Colobus_angolensis.KN985967.1                          10886228  5 +  10971483 t-t--t-t-----c
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147664392  5 + 156195979 T-T--T-T-----C
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            16377  5 +     23629 T-T--T-T-----C
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60613315  6 +  78930452 t-t--t-t----ca
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         39406  6 -     40477 -----T-T--TAAA
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     I 1 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 278272  5 -    399297 -----T-TTC---A
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53028954  5 +  72327488 -----T-TCC---A
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_88140              1873  6 +     11655 T-T--T-T----TA
i Crocidura_indochinensis.CroInd_scaffold_88140         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            51725  8 -     70449 T-T--T-TCCC--A
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  207865  5 -    956709 -----T-T---TAT
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 30450  5 -     67205 -----T-TTC---A
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 I 9
s Cuniculus_paca.CunPac_flattened_line_16637                17486  5 +     26546 -----T-T---TAA
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             58577  5 -    236241 -----T-TTC---A
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          183383  6 -   6883506 t-t--T-T----AA
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16844629  5 +  31942871 T-T--T-T-----A
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80036525  6 -  96802777 t-t--t-t----ta
i Delphinapterus_leucas.KZ290064.1                      I 3 C 0
s Desmodus_rotundus.KZ672188.1                           18698502  5 -  18957592 -------t--ttca
i Desmodus_rotundus.KZ672188.1                          I 4 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 322228  9 +    993696 t-tt-t-t--ttca
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   2881  9 +    151128 T-T-TT-TTTC--A
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   156727  5 +    228994 -----T-TTC---A
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3656051  5 +   4240102 -----G-G---TAG
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 27684  5 +     28912 -----G-G---TAG
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                35827  5 -     73477 -----T-TTC---A
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22998233 10 -  44670279 a-T--T-TTTCACA
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 11931  8 +     24177 t-t--t-t--tcca
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1491171  6 +   1727528 t-t--t-t----aa
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7815642 10 +  15467074 t-t--t-tttcaca
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        239501  5 -    369425 -----G-TTC---A
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           6614  5 -      7838 -----G-TTC---A
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85871888  9 +  99434291 T-T-TT-CTCC--A
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4703877  8 +   6522550 t-t--t-t--ttca
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5852682  8 -   7175178 t-t--t-t--ttca
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13351185  8 +  41866177 t-t--t-t--ttca
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          12675  8 +     92910 t-t--t-t--ttca
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erythrocebus_patas.Contig8                             48771029  2 -  48907691 T-T-----------
i Erythrocebus_patas.Contig8                            C 0 I 2
s Eschrichtius_robustus.EscRob_flattened_line_685          314741  6 +    330699 T-T--T-T----TA
i Eschrichtius_robustus.EscRob_flattened_line_685       I 9 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             61193  6 +     89355 T-T--T-T----TA
i Eubalaena_japonica.EubJap_flattened_line_7756         I 7 C 0
s Eulemur_albifrons.k141_715837                              4824  5 +     13586 T-T--T-T-----A
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               4757  5 -      6809 T-T--T-T-----A
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            11230  5 +     36558 T-T--T-T-----A
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             7552  5 +     60246 T-T--T-T-----A
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                11030  5 +    109717 T-T--T-T-----A
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               15414  5 +     16540 T-T--T-T-----A
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                15688  5 +     27497 T-T--T-T-----A
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           18144  5 +     26808 T-T--T-T-----A
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                32881  5 +     46535 T-T--T-T-----A
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              15602  5 -     29447 T-T--T-T-----A
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129892658  8 - 159252932 t-t--t-t--ccta
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129279745  8 - 158578461 t-t--t-t--ccta
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 20890  8 +     52776 T-T--G-TCC--TA
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Galago_moholi.ctg555                                     210657  3 -    847004 T-T--T--------
i Galago_moholi.ctg555                                  C 0 I 1
s Galago_senegalensis.k141_964197                           13032  3 -     43889 T-T--T--------
i Galago_senegalensis.k141_964197                       C 0 I 1
s Galagoides_demidoff.k141_1769638                          10104  3 +     27357 T-T--T--------
i Galagoides_demidoff.k141_1769638                      C 0 I 1
s Galeopterus_variegatus.GalVar_scaffold_354               156004  7 +    324696 T-T--T-TTC---A
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    180970  8 -    189561 t-tttt-t----aa
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           12801  5 -     18683 -----T-T---TAA
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               5090  5 -     14630 T-T--T-T-----T
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119652189  5 - 195582420 t-t--t-t-----t
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   77346  5 +    118900 -----T-T---TAA
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         1601  5 +     10286 T-T--T-T-----A
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                               78  5 -     11661 T-T--T-T-----A
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             5407  5 +     56096 T-T--T-T-----A
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        28657  5 -     42470 T-T--T-T-----A
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        45280  5 -     54384 T-T--T-T-----A
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              16932  8 +     53719 T-T--T-TCCC--G
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                27165  6 -     91191 --T-TT-T----AA
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2550808  5 +  31725842 -----T-T---Tca
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               60352 11 +     73687 TTT--T-TTTTGCA
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              146820  6 +    277961 T-T--T-T----TA
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      278099  9 -    477199 t-tt-t-t--ttca
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              7249  5 -      9143 -------TTTC--A
i Hipposideros_galeritus.HipGal_scaffold_104691         I 3 C 0
s Hoolock_leuconedys.ctg79                                      4497  5 -   7690867 T-T--T-T-----T
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 17003  8 -     67322 T-T--T-CCC--TA
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           18689  5 -    119109 -----T-TTC---A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              4921  4 +      5897 T-T--T-T------
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_624065                               1787  4 +      2112 T-T--T-T------
i Hylobates_agilis.k141_624065                          C 0 C 0
s Hylobates_klossii.k141_466549                             11361  5 +     11537 T-T-TT-T------
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14624468  4 -  25970782 T-T--T-T------
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            1723  4 -      2977 T-T--T-T------
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     5864  5 +     22540 -----G-TTC---A
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7125580  5 +  13083262 -----t-t---taa
i Ictidomys_tridecemlineatus.JH393315.1                 I 1 C 0
s Indri_indri.k141_4418183                                   1250  5 -      1457 T-T--T-T-----A
i Indri_indri.k141_4418183                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               8730  6 +     17520 T-T--T-T----TA
i Inia_geoffrensis.IniGeo_flattened_line_66725          I 5 C 0
s Jaculus_jaculus.JH725517.1                              8565620  5 +  11848649 -----T-TAC---A
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               23348  6 +     37189 T-T--T-T----TA
i Kogia_breviceps.KogBre_flattened_line_35920           I 6 C 0
s Lagothrix_lagothricha.k141_12968                          49954  5 -    147782 T-T--T-T-----T
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   113968  8 -    115756 T-T--T-T--TTTA
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258406962  5 - 285822530 T-T--T-T-----A
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        23713  5 +     39228 T-T--T-T-----A
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            53097  5 +     63517 T-T--T-T-----A
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        78356  5 +    116806 T-T--T-T-----A
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     31352  5 -     33031 T-T--T-T-----A
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3085696  8 -   3498232 T-T--T-TCCC--A
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    12977  7 +     22452 T-T--T-TTC---A
i Lepus_americanus.LepAme_scaffold_62849                C 0 I 12
s Lipotes_vexillifer.KE558548.1                            135686  6 +   3060487 t-t--t-t----ta
i Lipotes_vexillifer.KE558548.1                         I 6 C 0
s Lophocebus_aterrimus.ctg55                             19248095  5 +  19376315 T-T--T-T-----T
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           10417  3 +     84689 T-T--T--------
i Loris_lydekkerianus.k141_550999                       C 0 I 1
s Loris_tardigradus.ctg97                                 3778167  3 +   6799190 T-T--T--------
i Loris_tardigradus.ctg97                               C 0 I 1
s Loxodonta_africana.GL010040.1                          20593938 10 -  62548349 t-t--t-tttcaaa
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11087840 10 +  39895028 t-t--t-tccccca
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             19837  5 +     74745 T-T--T-T-----T
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12706293  5 +  12821369 T-T--T-T-----T
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                1938  5 -      3136 T-T--T-T-----T
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           46755  5 +     63263 T-T--T-T-----T
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                 1458  5 -      2568 T-T--T-T-----T
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 2044  5 -      7381 T-T--T-T-----T
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  45262  5 -     79256 T-T--T-T-----T
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196035370  5 + 196197964 t-t--t-t-----t
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11445538  5 +  11645122 t-t--t-t-----t
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   4209  5 -     46448 T-T--T-T-----T
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                1881  5 -     13212 T-T--T-T-----T
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 15562  5 -     55006 T-T--T-T-----T
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43840679  5 +  43892939 T-T--T-T-----T
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               16848  5 -     24607 T-T--T-T-----T
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               4214  5 -     27140 T-T--T-T-----T
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                701304  8 +    802869 T-T--T-TTCC--A
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43437256  5 -  43563597 T-T--T-T-----A
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4450082  5 -   4543643 T-T--T-T-----A
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            145335  4 +    252755 t-t--t-t------
i Manis_javanica.JSZB01003966.1                         C 0 I 3
s Manis_pentadactyla.KN017078.1                             35412  4 +     58827 t-t--c-t------
i Manis_pentadactyla.KN017078.1                         C 0 I 3
s Marmota_marmota.CZRN01000005.1                         36873420  5 +  64221397 -----t-t---taa
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       64122  8 -    234502 T-T--T-TTC--TA
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433              698  8 -     87323 T-T--T-TTCC--A
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               12457  5 +     15977 -----T-CTC---A
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1046663  5 -  26018355 -----T-TCC---A
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_227248                     20  6 -      1377 T-T--T-T----TA
i Mesoplodon_bidens.MesBid_scaffold_227248              I 6 C 0
s Microcebus_murinus.CM007691.1                          16509985  5 +  47401472 t-t--t-t-----a
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  34210 10 -     48017 A-T--T-TTTCACA
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               22411  5 -     32043 -------TTTC--A
i Micronycteris_hirsuta.MicHir_scaffold_37978           I 3 C 0
s Microtus_ochrogaster.CM001673.1                        22819800  5 -  98408828 -----G-TTC---A
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8209403  6 +  10048721 -----t-t--ttca
i Miniopterus_natalensis.LDJU01000022.1                 I 1 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            34057  6 +     45743 -----T-TTTC--A
i Miniopterus_schreibersii.MinSch_scaffold_24116        I 1 C 0
s Miopithecus_ogouensis.k141_2935907                         1809  5 +     29742 T-T--T-T-----T
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        11209  8 -    104932 T-T--T-TCCC--A
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     5371  5 +      8497 T-T--T-T-----A
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 146115  6 +    154973 T-T--T-T----TA
i Monodon_monoceros.MonMon_M_scaffold_5598              I 5 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                160931  6 +    265003 -----T-TTTC--A
i Mormoops_blainvillei.MorMeg_scaffold_2952             I 1 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                   715  7 -     19904 T-T-TT-A----AA
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 I 479
s Mungos_mungo.MunMun_flattened_line_8729                  144627  8 -    168139 T-T--T-TCCC--G
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          19260  8 -    100666 T-T--T-TTTC--A
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70766304  5 +  92629107 -----t-t---tca
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75489363  5 +  98207768 -----T-TTC---A
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67555591  5 +  89017189 -----T-TTC---A
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74330541  5 +  97876770 -----T-TTC---A
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             11581  5 +     98495 -----T-T---TGG
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4424068  8 -  28371801 t-t--t-t--tcca
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     89726  5 -    117718 -----T-TTC---C
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 I 10
s Myotis_brandtii.KE161952.1                               967558  8 +   8389877 t-t--t-t--ttca
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5019235  8 +   6462685 t-t--t-t--ttca
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3465139  8 -   3747815 t-t--t-t--ttca
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        10353  8 +     66751 T-T--T-TTTC--A
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             4761  3 -      8794 -------T----AA
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        I 2 C 0
s Nannospalax_galili.KL201303.1                            118408  5 +    362372 -----T-TTC---A
i Nannospalax_galili.KL201303.1                         C 0 I 23
s Nasalis_larvatus.k141_153429                               8310  5 +     48152 T-T--T-T-----T
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4484601  8 -  14209539 T-T--T-TCCC--A
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3950727  6 -   4490290 t-t--t-t----ta
i Neophocaena_asiaeorientalis.KZ688543.1                I 2 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  49020  8 +     94413 T-A--T-CTTC--A
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_220265                             232  5 +      1763 T-T--T-T-----T
i Nomascus_annamensis.k141_220265                       C 0 C 0
s Nomascus_concolor.k141_226614                              1025  5 -      5092 T-T--T-T-----T
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_642452                            1808  5 +      2851 T-T--T-T-----T
i Nomascus_gabriellae.k141_642452                       C 0 C 0
s Nomascus_siki_b.tarseq_80                             24743  5 -  18771707 T-T--T-T-----T
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  2446  5 +      4512 T-T--T-T-----T
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                30641 10 +   3668941 T-T--T-TCCCCCA
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65566842  3 -  95554990 T-T--T--------
i Nycticebus_bengalensis.LG16                           C 0 I 1
s Nycticebus_coucang.k141_2051882                            3571  3 +      6470 T-T--T--------
i Nycticebus_coucang.k141_2051882                       C 0 I 1
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65669176  3 +  89412551 T-T--T--------
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 I 1
s Ochotona_princeps.JH802095.1                            4995742  7 -  23139505 t-t--t-t---tca
i Ochotona_princeps.JH802095.1                          I 1 C 0
s Octodon_degus.JH651621.1                                3685286  5 +  10294119 -----T-T---tca
i Octodon_degus.JH651621.1                              C 0 I 9
s Odobenus_rosmarus.KB229369.1                             679266  8 -   3126709 t-t--t-t--tcca
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1079402  6 +   1425656 t-t--t-t----aa
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         36698  7 +     78940 t-tt-t-t----aa
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  125053  5 +    145789 -----G-TTC---A
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  36854  5 +     62360 -----T-TTC---A
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7224412  6 -   7562323 t-t--t-t----ta
i Orcinus_orca.KB316965.1                               I 5 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              57252 10 -     66828 T-T--T-TTTCACA
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141876015  7 + 163896628 T-T--T-T---tcg
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      307927 10 -    505867 t-t--t-tccccca
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                         473  3 -     53940 T-T--T--------
i Otolemur_crassicaudatus.k141_505435                   C 0 I 1
s Otolemur_garnettii.GL873528.1                          18008444  3 -  38779656 t-t--t--------
i Otolemur_garnettii.GL873528.1                         C 0 I 1
s Ovis_aries.CM001582.2                                 134076959  7 - 275406953 t-tt-t-t----aa
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      78173  7 +    140051 T-T-TT-T----AA
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127574455  5 - 205426864 t-t--t-t-----t
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120151608  5 - 196562556 t-t--t-t-----t
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  34043  8 +    295523 T-T--T-TCC--TA
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3637779  8 +  18214204 t-t--t-t--ccta
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5027452  8 -   6340057 t-t--t-t--ccta
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1065819  7 -   1292953 t-tt-t-t----aa
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188156044  5 - 188283584 t-t--t-t-----t
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             4360  5 +      5367 T-T--T-T-----T
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47513429  5 +  47705337 T-T--T-T-----T
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 67408  5 -    104429 T-T--T-T-----T
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    5941  5 +     14967 T-T--T-T-----T
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 1801  5 -      7628 T-T--T-T-----T
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    115506  6 -    135482 -----T-TCCC--A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 I 1 C 0
s Perodicticus_ibeanus.k141_117958                           5165  3 -     23713 T-T--T--------
i Perodicticus_ibeanus.k141_117958                      C 0 I 1
s Perodicticus_potto.k141_713187                            24477  3 -     27972 T-T--T--------
i Perodicticus_potto.k141_713187                        C 0 I 1
s Perognathus_longimembris.PerPac_flattened_line_22291      44301  5 -     45160 -----G-G---TAG
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4950091  5 -   8017169 -----T-TTC---A
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    12197  5 -     36578 -----C-TTC---A
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            121017  6 -    122454 T-T--T-T----TA
i Phocoena_phocoena.PhoPho_flattened_line_11948         I 3 C 0
s Piliocolobus_badius.k141_1987485                           1829  5 -      5908 T-T--T-T-----T
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       2453  5 -     17985 T-T--T-T-----T
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            1820  5 +      7694 T-T--T-T-----T
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26740298  5 +  26888534 t-t--t-t-----t
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            97177  8 +    112873 T-T--T-TTTC--A
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             43427  5 -     61926 T-T--T-T-----T
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        24858  5 +     78826 T-T--T-T-----T
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              8807  5 -     15800 T-T--T-T-----T
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        12005  5 -     16101 T-T--T-T-----T
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          5314  5 +      9673 T-T--T-T-----T
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13474310  5 -  19735023 T-T--T-T-----T
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           13216  5 -     31692 T-T--T-T-----T
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           5104  6 +     21690 T-T--T-T----TA
i Platanista_gangetica.PlaMin_flattened_line_72990      I 6 C 0
s Plecturocebus_bernhardi.k141_959214                       22656  5 +     44506 T-T--T-T-----T
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        22869  5 +     67491 T-T--T-T-----T
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      13108  5 -     98129 T-T--T-T-----T
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     22708  5 +    147771 T-T--T-T-----T
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        22963  5 -     23762 T-T--T-T-----T
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          3429  5 -     55515 T-T--T-T-----T
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         22782  5 +    152463 T-T--T-T-----T
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                        499  5 -    119457 T-T--T-T-----T
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         12504  5 +    134592 T-T--T-T-----T
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          23092  5 -     75465 T-T--T-T-----T
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              186977  5 -    373494 t-t--t-t-----t
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19807625  5 +  19899266 T-T--T-T-----T
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               5555  5 -     15069 T-T--T-T-----T
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              5689  5 +     14865 T-T--T-T-----T
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                1444 10 -      9567 T-T--T-TTTTGCA
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6848343  5 +  12164890 T-T--T-T-----A
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coronatus.k141_1353159                         3401  5 +     11805 T-T--T-T-----A
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           42743  5 +     52369 T-T--T-T-----A
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         35129  5 -     44753 T-T--T-T-----A
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            17053  5 +     27322 T-T--T-T-----A
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       16689  5 -     53241 T-T--T-T-----A
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         38954  5 -     48185 T-T--T-T-----A
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           34004  5 +     77221 -----T-TTC---A
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            3575  6 -     27784 -----T-TTTC--A
i Pteronotus_parnellii.KE867983.1                       I 1 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        246376  9 -    344369 T-T-TT-TTCC--A
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13245683  9 -  17261082 t-tt-t-t--tcca
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             603633  9 -   3946241 t-tt-t-t--tcca
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131534037  9 - 161321710 t-t--t-t-tccta
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             29673  5 +     56732 T-T--T-T-----T
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6806164  5 +   6970761 T-T--T-T-----T
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             5558  5 +     18040 T-T--T-T-----T
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                15479  6 +     68503 C-T--T-T----AA
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13915308  5 +  90463843 -----T-GTC---A
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1787519 10 +   2252614 t-tttt-t--ttca
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_1391695                           1786  5 -      1866 T-T--T-T-----T
i Rhinopithecus_bieti.k119_1391695                      C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206377443  5 - 206558726 T-T--T-T-----T
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44856343  5 -  45163003 T-T--T-T-----T
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                19010  8 +    109198 T-T--T-TTCC--A
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       7645  7 +     12214 T-T-TA-A----AC
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15672523  4 -  43202129 t-t--t-t------
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        4440  4 +     34089 T-T--T-T------
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              4381  4 -     60842 T-T--T-T------
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              4476  4 +     67014 T-T--T-T------
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              4454  4 +     60816 T-T--T-T------
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 4391  4 -     76454 T-T--T-T------
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17341116  4 -  30362882 T-T--T-T------
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         20475  4 -     62485 T-T--T-T------
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   32001  6 -    114521 T-T--T-TC----A
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        3170  5 +     15331 T-T--T-T-----T
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       8567  5 +     20762 T-T--T-T-----T
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         118569  5 +    130994 T-T--T-T-----T
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           37356  5 +     46263 T-T--T-T-----T
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     30470  5 +     42640 T-T--T-T-----T
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        13514  5 +     30600 T-T--T-T-----T
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  100037  5 -    120886 -----T-T---TGA
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            18578  6 +    739146 T-T--T-T----TA
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2239496  5 +   2842873 -----t-t---taa
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             234497  8 -    276980 T-T--T-TTCC--A
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            27289  8 +     62062 T-T--T-TCC--TG
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189271559  6 + 218635234 t-t--t-a----aa
i Sus_scrofa.CM000824.4                                 C 0 I 1
s Symphalangus_syndactylus.tarseq_24                        14728  5 -  13920577 T-T--T-T-----T
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               5745  8 -      6213 T-G--T-TTTC--A
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               14424  3 +     45698 -------T----AA
i Tamandua_tetradactyla.TamTet_scaffold_26877           I 2 C 0
s Tapirus_indicus.TapInd_scaffold_176                      806835  8 +   1148477 T-T--T-TTTC--A
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  57530  8 +     99546 T-T--T-TTTC--A
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               26253  5 +     42269 T-T--T-T-----A
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               59569  5 +     65473 T-T--T-T-----A
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194007570  5 - 194193292 t-t--t-t-----t
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  5252  6 +      6782 T-T--T-T----AA
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  135565  8 -    259118 T-T--T-TTTC--A
i Tonatia_saurophila.TonSau_scaffold_3334               I 2 C 0
s Trachypithecus_auratus.k141_738098                        26674  5 +     38948 T-T--T-T-----T
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   20403  5 -     32910 T-T--T-T-----T
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      1791  5 -     12939 T-T--T-T-----T
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       1725  5 -     14244 T-T--T-T-----T
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           43124  5 -     54611 T-T--T-T-----T
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                         930  5 -     11566 T-T--T-T-----T
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     3102  5 -     15592 T-T--T-T-----T
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          1759  5 +     14371 T-T--T-T-----T
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                     41  5 +     12481 T-T--T-T-----T
i Trachypithecus_leucocephalus.k141_381681              C 0 I 56
s Trachypithecus_melamera.k141_238507                       14692  5 +     14732 T-T--T-T-----T
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       5163  5 -     28054 T-T--T-T-----T
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44659963  5 -  44834318 T-T--T-T-----T
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       2267  5 +     13828 T-T--T-T-----T
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   4871  6 +     90398 T-T--T-T----AA
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16084608 10 +  31416278 t-t--t-ttccacA
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2792617  7 -   3938065 T-T--T-TTC---A
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    4829  9 +     13056 T-TTTT-TTC---A
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69313127  6 -  96451834 t-t--t-t----ta
i Tursiops_truncatus.MRVK01000923.1                     I 3 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   1031  6 +     10241 T-T--T-TC----A
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6514514  8 +  28682327 t-t--t-t--tcca
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  5045  5 -     20643 T-T--T-T-----G
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             24586  5 -     33872 T-T--T-T-----G
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1524371  7 -   2331223 t-t--t-t---taa
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                138019 10 -    281493 T-T--T-TCCCCCA
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       126604  5 -    134049 -----T-TTC---A
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        213992  8 -    227762 T-T--T-TTCC--A
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     14714  5 -     20485 -----T-TTC---A
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           6625  6 -      8775 T-T--T-T----TA
i Ziphius_cavirostris.ZipCav_flattened_line_127025      I 5 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             38964  0 -     47444 C
e Sorex_araneus.JH798170.1                               17750754 3364 -  27805282 I
e Erinaceus_europaeus.JH835290.1                         11534163  4 +  16010500 I
e Balaenoptera_bonaerensis.DF502048.1                        5079 15 -     13118 I
e Hylobates_pileatus_a.tarseq_592                             33391 319 -     60944 I
e Propithecus_coquerelli.NW_012147997.1                    667273 6500 -   2312742 I
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               11577 25 +    209709 CAAGAAT-TT-TTA-TA--TA---AAATT-T---TT-A
s Acinonyx_jubatus.LLWD01000356.1                         2033707 13 +   3721120 g--gaat-tt-ata-ca--t------------------
i Acinonyx_jubatus.LLWD01000356.1                       C 0 I 2
s Acomys_cahirinus.AcoCah_scaffold_1625                    112324 23 -    189883 G--TAAT-TT-ATG-CA--TG---AAAG-GG---TA-A
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10657034 22 +  23371972 G--GAAT-TT-ATA-CA--CA---AGATT-T---TA--
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 I 1
s Ailurus_fulgens.LNAC01000003.1                          7094377 22 -  16596857 g--gaat-tt-atA-CA--CA---AGATT-T---TA--
i Ailurus_fulgens.LNAC01000003.1                        C 0 I 1
s Allactaga_bullata.AllBul_scaffold_70162                   16615 23 -     22067 G--AAAC-TT-ATA-CA--TA---AAAT-TA---TA-A
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   1068 25 -     60446 CAGGAAT-TT-ATA-AA--TG---AAATT-T---TT-A
i Allenopithecus_nigroviridis.k141_2469532              I 3 C 0
s Allochrocebus_lhoesti.k141_3566948                         1790 25 -     29318 CAGGAAT-TT-ATA-AA--TG---AAATT-T---TT-A
i Allochrocebus_lhoesti.k141_3566948                    I 2 C 0
s Allochrocebus_preussi.k141_1108977                          725 25 +     38766 CAGGAAT-TT-ATA-AA--TG---AAATT-T---TT-A
i Allochrocebus_preussi.k141_1108977                    I 2 C 0
s Allochrocebus_solatus.k141_371672                          1684 25 -     80423 CAGGAAT-TT-ATA-AA--TG---AAATT-T---TT-A
i Allochrocebus_solatus.k141_371672                     I 2 C 0
s Alouatta_belzebul.k141_1818029                             9981 25 -     18050 TAAGAAT-TT-ATA-CA--TA---AAATT-T---TA-A
i Alouatta_belzebul.k141_1818029                        I 1 C 0
s Alouatta_caraya.k141_5460                                 11074 25 -     11521 TAAGAAT-TT-ATA-CA--TA---AAATT-T---TA-A
i Alouatta_caraya.k141_5460                             I 1 C 0
s Alouatta_discolor.k141_811576                             10658 25 -     21359 TAAGAAT-TT-ATA-CA--TA---AAATT-T---TA-A
i Alouatta_discolor.k141_811576                         I 1 C 0
s Alouatta_juara.k141_1244470                                 273 25 +      2129 AAAGAAT-TT-ATA-CA--TA---AAATT-T---TA-A
i Alouatta_juara.k141_1244470                           I 1 C 0
s Alouatta_macconnelli.k141_1331706                          9957 25 -     10438 TAAGAAT-TT-ATA-CA--TA---AAATT-T---TA-A
i Alouatta_macconnelli.k141_1331706                     I 1 C 0
s Alouatta_nigerrima.k141_2718643                            6613 25 +      7047 TAAGAAT-TT-ATA-CA--TA---AAATT-T---TA-A
i Alouatta_nigerrima.k141_2718643                       I 1 C 0
s Alouatta_palliata.k141_1316127                             9893 25 +     10410 TAAGAAT-TT-ATT-CA--TA---AAATT-T---TA-A
i Alouatta_palliata.k141_1316127                        I 1 C 0
s Alouatta_puruensis.k141_1284840                            3701 25 -      4927 TAAGAAT-TT-ATA-CA--TA---AAATT-T---TA-A
i Alouatta_puruensis.k141_1284840                       I 1 C 0
s Ammotragus_lervia.NIVO01013474.1                        3519824 23 +   4113121 g--aaat-gt-atg-cA--TA---AGGTT-TT--AA--
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      390031 22 -    631301 G--GAAT-TT-ATA-CA--CA---AGATT-T---TA--
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 I 1
s Antilocapra_americana.AntAmePen_scaffold_42841            30411 23 +     33004 G--GAAT-TT-ATG-CA--CA---AGAGT-TT--AA--
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 62341 25 +     78111 AAAGAAT-TT-ATA-CA--AA---AAATT-T---TA-A
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            5284 25 +     22701 CAAGAAT-TT-ATA-CA--AA---AAATT-T---TA-A
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5749240 25 +   9889416 caagaat-tt-ata-ca--aa---aaatt-t---ta-a
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             5826 25 -    104377 CAAGAAT-TT-ATA-CA--AA---AAATT-T---TA-A
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               5828 25 +     23246 CAAGAAT-TT-ATA-CA--AA---AAATT-T---TA-A
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     3424 20 +      5067 -----GT-AT-GTT-CA--GA---AAAT--CT--TA-A
i Aplodontia_rufa.AprRuf_scaffold_156013                I 2 C 0
s Arctocebus_calabarensis.k141_587554                         767 23 +      9265 G--TAAT-CT-ATC-TA--TA---AAATT-T---TA-A
i Arctocebus_calabarensis.k141_587554                   I 2 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 8439 22 -     29036 G--GAAT-TT-ACA-CA--CA---AGATT-T---TA--
i Artibeus_jamaicensis.ArtJam_scaffold_41619            I 5 I 1
s Ateles_geoffroyi_b.tarseq_2582                             9539088 25 +  39197703 CAAGAAT-TT-ATA-CA--TA---AAATT-T---TA-A
i Ateles_geoffroyi_b.tarseq_2582                           I 1 C 0
s Ateles_belzebuth.k141_1348307                             60361 25 +     85812 CAAGAAT-TT-ATA-CA--TA---AAATT-T---TA-A
i Ateles_belzebuth.k141_1348307                         I 1 C 0
s Ateles_chamek.k141_1072810                                11373 25 +     89302 CAAGAAT-TT-ATA-CA--TA---AAATT-T---TA-A
i Ateles_chamek.k141_1072810                            I 1 C 0
s Ateles_geoffroyi_a.k141_1300742                             15876 25 -     58268 CAAGAAT-TT-ATA-CA--TA---AAATT-T---TA-A
i Ateles_geoffroyi_a.k141_1300742                         I 1 C 0
s Ateles_marginatus.k141_899112                             63869 25 +    119057 CAAGAAT-TT-ATA-CA--TA---AAATT-T---TA-A
i Ateles_marginatus.k141_899112                         I 1 C 0
s Ateles_paniscus.k141_1631200                               5838 25 -     25888 CAAGAAT-TT-ATA-CA--TA---AAATT-T---TA-A
i Ateles_paniscus.k141_1631200                          I 1 C 0
s Avahi_laniger.k141_2840928                                 6490 23 -     16375 G--TAAT-TT-ATA-CA--TA---AATTT-T---TA-A
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                                110 23 +      6337 G--TAAT-TT-ATA-CA--TA---AATTT-T---TA-A
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26379908 23 +  51448160 g--gaat-tt-gta-CA--CA---GGGTT-TT--AA--
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        5094  6 -     13118 ---------------------------tt-t--NNN--
i Balaenoptera_bonaerensis.DF502048.1                   I 15 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   42892 23 -     72089 G--AAAT-TT-ATG-CA--TA---AGGTT-TT--AA--
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6559565 23 +   6870073 g--aaat-tt-atg-cA--CA---AGGTT-TT--AA--
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138139669 23 - 161108492 g--aaat-tt-atg-cA--CA---AGGTT-TT--AA--
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     572207 23 -    998990 g--aaat-tt-atg-cA--CA---AGGTT-TT--AA--
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136295402 23 - 158972876 g--aaat-tt-atg-cA--CA---AGGTT-TT--AA--
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1232485 23 -   1914593 g--aaat-tt-atg-cA--CA---AGGTT-TT--AA--
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               113724 25 -    171031 CAAGAAT-TT-ATA-CA--TA---AAATT-T---TA-A
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 12755 25 +    125063 CAAGAAT-TT-ATA-CA--TA---AAATT-T---TA-A
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                14797 25 -    216513 CAAGAAT-TT-ATA-CA--TA---AAATT-T---TA-A
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        7340 25 -    134917 CAAGAAT-TT-ATA-CA--TA---AAATT-T---TA-A
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3219274 23 -   8989139 g--gaat-tt-ata-CA--CA---AGATT-TT--AA--
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           396976 23 -  15254737 g--gaat-tt-ata-CA--CA---AGATT-TT--AA--
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2972711 23 +   6889770 g--gaat-tt-ata-CA--CA---AGATT-TT--AA--
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11519193 22 +  39901454 G--GAAT-TT-ATA-CA--AA---AGATT-T---TA--
i CanFam4.chr31                                         C 0 I 1
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   14218 22 +     87036 G--GAAT-TT-ATA-CA--AA---AGATT-T---TA--
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 I 1
s Canis_lupus_dingo.QKWQ01001993.1                       11265860 22 -  35597290 g--gaat-TT-ATA-CA--AA---AGATT-T---TA--
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 I 1
s Canis_lupus_familiaris.chr31                           11088394 22 +  39895921 g--gaat-TT-ATA-CA--AA---AGATT-T---TA--
i Canis_lupus_familiaris.chr31                          C 0 I 1
s Canis_lupus_orion.HG994411.1                           16455409 22 -  44759192 g--gaat-TT-ATA-CA--AA---AGATT-T---TA--
i Canis_lupus_orion.HG994411.1                          C 0 I 1
s Capra_aegagrus.CM003214.1                              21324900 23 + 157394656 g--aaat-gt-atg-cA--TA---AGGTT-TT--AA--
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135706127 23 - 157403528 g--aaat-gt-atg-CA--TA---AGGTT-TT--AA--
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          308775 25 +    345090 ACGGaat-tt-ata-ca--ta---aaatt-t---ta-a
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               59233 22 +     67245 G--GAAT-TT-GTA-CA--CA---AGATT-T---TA--
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 I 1
s Castor_canadensis.CasCan_scaffold_47037                   30439 23 +     33760 G--GAAT-TT-ATA-CA--TA---AAAT-TT---TA-A
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   158593 22 -    276539 G--GAAT-TT-ATA-CA--CA---AGGTT-T---AA--
i Catagonus_wagneri.CatWag_scaffold_1305                I 1 C 0
s Cavia_aperea.AVPZ01000278.1                            15786311 22 -  24422027 c--aaat-tt-ata-ca--ta---aaat--t---tt-a
i Cavia_aperea.AVPZ01000278.1                           C 0 I 10
s Cavia_porcellus.DS562889.1                             15798246 22 -  24440124 c--aaat-tt-ata-ca--ta---aaat--t---tt-a
i Cavia_porcellus.DS562889.1                            C 0 I 10
s Cavia_tschudii.CavTsc_scaffold_488                       176437 22 +    436027 C--AAAT-TT-ATA-CA--TA---AAAT--T---TT-A
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 I 10
s Cebus_albifrons.Contig22                               18890576 25 -  29618158 CAAGAAT-TT-ATA-CA--TA---AAATT-T---TA-A
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 8120 25 -     26817 CAAGAAT-TT-ATA-CA--TA---AAATT-T---TA-A
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                12360 25 +     25043 CAAGAAT-TT-ATA-CA--TA---AAATT-T---TA-A
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         7810 25 +     21754 ACCGAAT-TT-ATA-CA--TA---AAATT-T---TA-A
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4363588 23 +   7569818 g--gaat-tt-atA-CA--CG---AGATT-TT--AA--
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         3345 23 -      9338 G--GAAT-TT-ATA-CA--CG---AGATT-TT--AA--
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6555013 25 +   6739814 caggaat-tt-ata-aa--tg---aaatt-t---tt-a
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      26490 25 +     60454 CAGGAAT-TT-ATA-AA--TG---AAATT-T---TT-A
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          1695 25 -     21101 CAGGAAT-TT-ATA-AA--TG---AAATT-T---TT-A
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         59005 25 -    107033 CAGGAAT-TT-ATA-AA--TG---AAATT-T---TT-A
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        1897 25 -     17608 CAGGAAT-TT-ATA-AA--TG---AAATT-T---TT-A
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          29392 25 +     30494 CAGGAAT-TT-ATA-AA--TG---AAATT-T---TT-A
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          58238 25 -     59240 CAGGAAT-TT-ATA-AA--TG---AAATT-T---TT-A
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          1939 25 +     16677 CAGGAAT-TT-ATA-AA--TG---AAATT-T---TT-A
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           24097 25 +     35983 CAGGAAT-TT-ATA-AA--TG---AAATT-T---TT-A
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11990625 25 +  12117833 CAGGAAT-TT-ATA-AA--TG---AAATT-T---TT-A
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46477383 25 +  46592721 CAGGAAT-TT-ATA-AA--TG---AAATT-T---TT-A
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      40934 25 -     45581 CAGGAAT-TT-ATA-AA--TG---AAATT-T---TT-A
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       1940 25 +     35577 CAGGAAT-TT-ATA-AA--TG---AAATT-T---TT-A
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        1716 25 -     25661 CAGGAAT-TT-ATA-AA--TG---AAATT-T---TT-A
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        1694 25 -     17744 CAGGAAT-TT-ATA-AA--TG---AAATT-T---TT-A
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        21310 25 +     37128 CAGGAAT-TT-ATA-AA--TG---AAATT-T---TT-A
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           2516  9 -      6963 G--CAAT-TT-AT-------------------------
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           58775 23 -     68416 G--TAAT-TT-ATA-CA--TA---GATTT-T---TA-A
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            7819 23 +     13308 G--TAAT-TT-ATA-CA--TA---GATTT-T---TA-A
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             5378 25 -     18223 CAAGAAT-TT-ATA-CA--TA---AAATT-T---TA-A
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             22401 25 +     25473 CAAGAAT-TT-ATA-CA--TA---AAATT-T---TA-A
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           41436 25 +     57117 CAAGAAT-TT-ATA-CA--TA---AAATT-T---TA-A
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          46115 25 +     54541 CAAGAAT-TT-ATA-CA--TA---AAATT-T---TA-A
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15961475 23 +  43084221 C--AAAT-TT-ATA-CA--TA---AACA--T---TTAA
i Chinchilla_lanigera.JH721867.1                        C 0 I 14
s Chiropotes_israelita.k141_1189915                         70930 25 +    196370 CAAGAAT-TT-ATA-CA--TA---AAATT-T---TA-A
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          15110 25 +     40510 CAAGAAT-TT-ATA-CA--TA---AAATT-T---TA-A
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15138855 25 -  15256731 CAGGAAT-TT-ATA-AA--TG---AAATT-T---TT-A
i Chlorocebus_aethiops.ctg22                            I 2 C 0
s Chlorocebus_pygerythrus.k141_1486215                      33902 25 -     53260 CAGGAAT-TT-ATA-AA--TG---AAATT-T---TT-A
i Chlorocebus_pygerythrus.k141_1486215                  I 2 C 0
s Chlorocebus_sabaeus.CM001963.2                        101144466 25 + 101219884 caggaat-tt-ata-aa--tg---aaatt-t---tt-a
i Chlorocebus_sabaeus.CM001963.2                        I 2 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                16198 23 -     21363 G--GAAT-TT-ATA-CA--CA---AGATT-T---TA-A
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           761505 23 +    964067 G--GAAT-TT-ATA-CA--CA---AGATT-T---TA-A
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_3549804              123 23 -       354 G--AAAA-TT-AAA-CA--TG---GGATT-G---TA-A
i Chrysochloris_asiatica.ChrAsi_scaffold_3549804        C 0 C 0
s Colobus_angolensis.KN985967.1                          10886233 25 +  10971483 caagaat-tt-ata-aa--tg---aaatt-t---tt-a
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147664397 25 + 156195979 CAAGAAT-TT-ATA-AA--TG---AAATT-T---TT-A
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            16382 25 +     23629 CAAGAAT-TT-ATA-AA--TG---AAATT-T---TT-A
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60613321 20 +  78930452 g--aaa---t-atg-ca--GA---AGATT-T---CA--
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         39412 22 -     40477 A--GAAT-TT-ATA-TA--CA---AGTTT-T---TA--
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 I 1
s Cricetomys_gambianus.CriGam_scaffold_949                 278277 22 -    399297 G--A-AT-TT-ATA-GA--TG---AGAG-TT---TA-A
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53028959 23 +  72327488 G--GAAT-TT-ATA-CA--TG---GAAG-TT---TA-A
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_88140              1879 24 +     11655 G--TAAT-TT-ATA-TACTCA---AGACT-T---TA--
i Crocidura_indochinensis.CroInd_scaffold_88140         C 0 I 12
s Cryptoprocta_ferox.CryFer_flattened_line_19014            51733 22 -     70449 G--GAAT-TT-ATA-AA--TA---AGATT-T---TA--
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 I 1
s Ctenodactylus_gundi.CteGun_scaffold_447                  207870 22 -    956709 G--AAAT-TT-GTT-CA--TA---AAAC--T---TA-A
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 30464 10 -     67205 --------------------A---AAAT--T---TTAA
i Ctenomys_sociabilis.CteSoc_scaffold_19489             I 9 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                17491 23 +     26546 C--AAAT-TT-ATA-CA--TA---AAAT--T---TTCA
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             58582 23 -    236241 C--AAAT-TT-ATA-CA--TA---AAAT--T---TTCA
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          183389 23 -   6883506 G--GAAT-TT-ACA-TA--CA---AGATT-T---TA-A
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16844634 23 +  31942871 G--TAAT-TT-ATA-CA--TA---AATTT-T---TA-A
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80036531 23 -  96802777 g--gaat-tt-gtA-CA--CA---AGGTT-TT--AA--
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18698507 22 -  18957592 g--gAAT-TT-ATA-TA--CA---AGATT-T---TA--
i Desmodus_rotundus.KZ672188.1                          C 0 I 1
s Dicerorhinus_sumatrensis.PEKH010003161.1                 322237 23 +    993696 g--gaat-tt-atA-CA--CG---AGATT-TT--AA--
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   2890 23 +    151128 G--GAAT-TT-ATA-CA--CG---AGATT-TT--AA--
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   156732 23 +    228994 A--AAAT-TT-ATG-CA--TA---AACG--T---TTAA
i Dinomys_branickii.DinBra_scaffold_1996                C 0 I 10
s Dipodomys_ordii.KN672545.1                              3656056 22 +   4240102 G--GGAT-TT-ATA-CA--TA---CATT--T---TC-A
i Dipodomys_ordii.KN672545.1                            C 0 I 3
s Dipodomys_stephensi.DipSte_scaffold_44365                 27689 22 +     28912 G--GGAT-TT-ATA-CA--TA---CATT--T---TC-A
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 I 3
s Dolichotis_patagonum.DolPat_scaffold_14102                35832 23 -     73477 C--AAAT-TT-ATA-CA--TA---AAAT--T---TTCA
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22998243 24 -  44670279 G--AAAT-TT-AAA-CA--CT---AAACTTT---TA-A
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 11939 22 +     24177 g--gaat-tt-atA-CA--CA---AGGTT-T---TA--
i Eidolon_helvum.KE772537.1                             C 0 I 1
s Elaphurus_davidianus.JRFZ01086400.1                     1491177 23 +   1727528 g--gaat-tt-atg-CA--CA---AGGTT-TT--AA--
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7815652 24 +  15467074 a--aaat-gt-aaaaaa--tg---agaTT-T---TA-A
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        239506 23 -    369425 G--GAAT-TT-ATA-CA--TG---GAAG-TT---TA-A
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           6619 23 -      7838 G--GAAT-TT-ATA-CA--TG---GAAG-TT---TA-A
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85871897 22 +  99434291 G--GAAT-TT-ATA-CC--CA---AGATT-T---TA--
i Enhydra_lutris.KZ291749.1                             C 0 I 1
s Eptesicus_fuscus.JH977687.1                             4703885 21 +   6522550 g--GAAT-TT-ATA-TA--CA----GATT-T---TA--
i Eptesicus_fuscus.JH977687.1                           C 0 I 17
s Equus_asinus.JREZ01000062.1                             5852690 22 -   7175178 g--gaat-tt-atA-CA--TG---AGATT-T---AA--
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13351193 22 +  41866177 g--gaat-tt-atA-CA--TG---AGATT-T---AA--
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          12683 22 +     92910 g--gaat-tt-atA-CA--TG---AGATT-T---AA--
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erythrocebus_patas.Contig8                             48771033 25 -  48907691 CAGGAAT-TT-ATA-AA--TG---AAATT-T---TT-A
i Erythrocebus_patas.Contig8                            I 2 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          314747 23 +    330699 G--GAAT-TT-GTA-CA--CA---GGGTT-TT--AA--
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             61199 23 +     89355 G--GAAT-TT-GTA-CA--CA---GGGTT-TT--AA--
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              4829 23 +     13586 G--TAAT-TT-ATA-CA--TA---AATTT-T---TA-A
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               4762 23 -      6809 G--TAAT-TT-ATA-CA--TA---AATTT-T---TA-A
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            11235 23 +     36558 G--TAAT-TT-ATA-CA--TA---AATTT-T---TA-A
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             7557 23 +     60246 G--TAAT-TT-ATA-CA--TA---AATTT-T---TA-A
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                11035 23 +    109717 G--TAAT-TT-ATA-CA--TA---AATTT-T---TA-A
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               15419 23 +     16540 G--TAAT-TT-ATA-CA--TA---AATTT-T---TA-A
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                15693 23 +     27497 G--TAAT-TT-ATA-CA--TA---AATTT-T---TA-A
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           18149 23 +     26808 G--TAAT-TT-ATA-CA--TA---AATTT-T---TA-A
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                32886 23 +     46535 G--TAAT-TT-ATA-CA--TA---AATTT-T---TA-A
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              15607 23 -     29447 G--TAAT-TT-ATA-CA--TA---AATTT-T---TA-A
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129892666 13 - 159252932 g--gaat-tt-ata-ca--t------------------
i Felis_catus.CM001386.2                                C 0 I 2
s Felis_catus_fca126.CM031420.1                         129279753 13 - 158578461 g--gaat-tt-ata-ca--t------------------
i Felis_catus_fca126.CM031420.1                         C 0 I 2
s Felis_nigripes.FelNig_flattened_line_8080                 20898 13 +     52776 G--GAAT-TT-ATA-CA--T------------------
i Felis_nigripes.FelNig_flattened_line_8080             C 0 I 2
s Galago_moholi.ctg555                                     210661 23 -    847004 G--TAAT-CT-ATA-CA--TA---AAATT-T---TA-A
i Galago_moholi.ctg555                                  I 1 C 0
s Galago_senegalensis.k141_964197                           13036 23 -     43889 G--TAAT-CT-ATA-CA--TA---AAATT-T---TA-A
i Galago_senegalensis.k141_964197                       I 1 C 0
s Galagoides_demidoff.k141_1769638                          10108 23 +     27357 G--TAAT-CG-ATA-CA--TA---AAATT-T---TA-A
i Galagoides_demidoff.k141_1769638                      I 1 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               156011 23 +    324696 G--GAAT-TT-ATA-GA--TA---AAATT-T---TA-A
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    180978 23 -    189561 g--gaat-tt-atg-CA--CA---GGGTT-TT--AA--
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           12806 23 -     18683 G--GAGT-TT-GTA-CA--TA---AAAT--T--ATA-A
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               5095 25 -     14630 CAAGAAT-TT-ATA-TA--TA---AAATT-T---TT-A
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119652194 25 - 195582420 caagaat-tt-ata-ta--ta---aaatt-t---tt-a
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   77351 23 +    118900 G--AAAT-TT-GTA-CA--TA---AAAT--T--ATG-A
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         1606 23 +     10286 G--CAAT-TT-GTA-CA--TA---AATTT-T---TA-A
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                               83 23 -     11661 G--CAAT-TT-GTA-CA--TA---AATTT-T---TA-A
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             5412 23 +     56096 G--CAAT-TT-GTA-CA--TA---AATTT-T---TA-A
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        28662 23 -     42470 G--CAAT-TT-GTA-CA--TA---AATTT-T---TA-A
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        45285 23 -     54384 G--CAAT-TT-GTA-CA--TA---AATTT-T---TA-A
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              16940 22 +     53719 A--GAAT-TT-ATA-AA--TA---AGATT-T---TA--
i Helogale_parvula.HelPar_flattened_line_22962          C 0 I 1
s Hemitragus_hylocrius.HemHyl_scaffold_16669                27171 23 -     91191 G--AAAT-TT-ATG-CA--TA---AGGTT-TT--AA--
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2550813 23 +  31725842 c--aaat-gt-ata-ca--ta---aaac--T---TTAA
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               60363 22 +     73687 G--AAAT-TT-AAA--A--GG---AGATT-T---TA-T
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 I 2
s Hippopotamus_amphibius.HipAmp_scaffold_1308              146826 23 +    277961 G--GAAT-GT-ACA-CA--CA---AGGTT-TT--AA--
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      278108 22 -    477199 g--gaat-tt-atA-TA--CA---AGATT-T---TA--
i Hipposideros_armiger.JXIK01001085.1                   C 0 I 1
s Hipposideros_galeritus.HipGal_scaffold_104691              7254 21 -      9143 ---TAAT-TT-ATA-TA--CA---AGATT-T---TA--
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 I 1
s Hoolock_leuconedys.ctg79                                      4502 25 -   7690867 CAAGAAT-TT-CTA-TA--TA---AAATT-T---TT-A
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 17011 22 -     67322 T--GAAT-TT-ATA-AA--TA---AGATT-T---CA--
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 I 1
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           18694 23 -    119109 C--AAAT-TT-ATA-CA--TA---AAAT--T---TTCA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              4925 25 +      5897 CAAGAAT-TT-CTA-CA--TA---AAATT-T---TT-A
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_624065                               1791 25 +      2112 CAAGAAT-TT-CTA-CA--TA---AAATT-T---TT-A
i Hylobates_agilis.k141_624065                          C 0 C 0
s Hylobates_klossii.k141_466549                             11366 25 +     11537 CAAGAAT-TT-CTA-TA--TA---AAATT-T---TT-A
i Hylobates_klossii.k141_466549                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14624472 25 -  25970782 CAAGAAT-TT-CTA-TA--TA---AAATT-T---TT-C
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            1727 25 -      2977 CAAGAAT-TT-CTA-TA--TA---AAATT-T---TT-A
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     5869 23 +     22540 C--AAAT-TT-ATA-TA--TA--CAAAT--T---TA-A
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7125585 23 +  13083262 a--gaat-ca-gtt-cA--TA---AAAG--CT--TA-A
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_4418183                                   1255 23 -      1457 G--TAAT-TT-ATA-CA--TA---AATTT-T---TA-A
i Indri_indri.k141_4418183                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               8736 23 +     17520 G--GAAT-TT-GTA-CA--CA---AGGTT-TT--AA--
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8565625 23 +  11848649 G--AAAc-tt-ata-ca--ta---aaat-ta---ta-a
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               23354 23 +     37189 G--GAAT-TT-GTA-CA--CA---AGGTT-TT--AA--
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          49959 25 -    147782 CAAGAAT-TT-ATA-CA--TA---AAATT-T---TA-A
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   113976 21 -    115756 G--GAAT-TT-ATA-CA--CA----GATT-T---TG--
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 I 17
s Lemur_catta.scaffold_1                                258406967 23 - 285822530 G--TAAT-TT-ATA-CA--TA---AATTT-T---TA-A
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        23718 23 +     39228 A--TAAT-TT-ATA-CA--TA---AATTT-T---TA-A
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            53102 23 +     63517 A--TAAT-TT-ATA-CA--TA---AATTT-T---TA-A
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        78361 23 +    116806 A--TAAT-TT-ATA-CA--TA---AATTT-T---TA-A
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     31357 23 -     33031 A--TAAT-TT-ATA-CA--TA---AATTT-T---TA-A
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3085704 21 -   3498232 G--GAAT-TT-ATA-CA--CA---AG-TT-T---TA--
i Leptonychotes_weddellii.KB714749.1                    C 0 I 1
s Lepus_americanus.LepAme_scaffold_62849                    12996 12 +     22452 ------------------------AAAAC-TTTTTA-A
i Lepus_americanus.LepAme_scaffold_62849                I 12 C 0
s Lipotes_vexillifer.KE558548.1                            135692 23 +   3060487 g--gaat-TT-GTA-CA--CA---AGGTT-TT--AA--
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19248100 25 +  19376315 CAGGAAT-TT-ATA-AA--TG---AAATT-T---TT-A
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           10421 23 +     84689 G--TAAT-CC-ATA-CA--TA---AAACT-T---TA-A
i Loris_lydekkerianus.k141_550999                       I 1 C 0
s Loris_tardigradus.ctg97                                 3778171 23 +   6799190 G--TAAT-CC-ATA-CA--TA---AAACT-T---TA-A
i Loris_tardigradus.ctg97                               I 1 C 0
s Loxodonta_africana.GL010040.1                          20593948 23 -  62548349 g--aaat-tt-aaA-CA--TG---AGATT-T---TA-A
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11087850 22 +  39895028 g--gaat-TT-ATA-CA--CA---AGATT-T---TA--
i Lycaon_pictus.CM007556.1                              C 0 I 1
s Macaca_arctoides.k141_2201161                             19842 25 +     74745 CAGGAAT-TT-ATA-AA--TG---AAATT-T---TT-A
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12706298 25 +  12821369 CAGGAAT-TT-ATA-AA--TG---AAATT-T---TT-A
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                1943 25 -      3136 CAGGAAT-TT-ATA-AA--TG---AAATT-T---TT-A
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           46760 25 +     63263 CAGGAAT-TT-ATA-AA--TG---AAATT-T---TT-A
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                 1463 25 -      2568 CAGGAAT-TT-ATA-AA--TG---AAATT-T---TT-A
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 2049 25 -      7381 CAGGAAT-TT-ATA-AA--TG---AAATT-T---TT-A
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  45267 25 -     79256 CAGGAAT-TT-ATA-AA--TG---AAATT-T---TT-A
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196035375 25 + 196197964 caggaat-tt-ata-aa--tg---aaatt-t---tt-a
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11445543 25 +  11645122 caggaat-tt-ata-aa--tg---aaatt-t---tt-a
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   4214 25 -     46448 CAGGAAT-TT-ATA-AA--TG---AAATT-T---TT-A
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                1886 25 -     13212 CAGGAAT-TT-ATA-AA--TG---AAATT-T---TT-A
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 15567 25 -     55006 CAGGAAT-TT-ATA-AA--TG---AAATT-T---TT-A
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43840684 25 +  43892939 CAGGAAT-TT-ATA-AA--TG---AAATT-T---TT-A
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               16853 25 -     24607 CAGGAAT-TT-ATA-AA--TG---AAATT-T---TT-A
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               4219 25 -     27140 CAGGAAT-TT-ATA-AA--TG---AAATT-T---TT-A
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                701312 22 +    802869 G--GAAT-TT-ATA-CA--CA---AAGTT-T---TA--
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 I 1
s Mandrillus_leucophaeus.scaffold125                     43437261 25 -  43563597 CAGGAAT-TT-ATA-AA--TG---AAATT-T---TT-A
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4450087 25 -   4543643 CAGGAAT-TT-ATA-AA--TG---AAATT-T---TT-A
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            145342 22 +    252755 a--caaT-TT-ATA-CT--CA---AGATT-T---TA--
i Manis_javanica.JSZB01003966.1                         I 3 I 1
s Manis_pentadactyla.KN017078.1                             35419 22 +     58827 A--CAAT-TT-ATA-CA--CA---AGATT-T---TA--
i Manis_pentadactyla.KN017078.1                         I 3 I 1
s Marmota_marmota.CZRN01000005.1                         36873425 23 +  64221397 a--gaat-ca-gtt-CA--TA---AAAG--CT--TA-A
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       64130 22 -    234502 G--GAAT-TT-ATA-TA--TA---AGATG-C---TA--
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 I 1
s Mellivora_capensis.MelCap_flattened_line_15433              706 22 -     87323 G--GAAT-TT-ATA-CA--CA---AGATT-T---TA--
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 I 1
s Meriones_unguiculatus.MerUng_scaffold_52233               12462 23 +     15977 G--GGAT-TT-ATA-TA--TA---AATT-TG---TA-A
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1046668 23 -  26018355 G--GAAT-TT-ATA-CA--TG---AAAG-TT---TA-A
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_227248                     26 23 -      1377 G--GAAT-TT-GTA-CA--CA---AGGTT-TT--AA--
i Mesoplodon_bidens.MesBid_scaffold_227248              C 0 C 0
s Microcebus_murinus.CM007691.1                          16509990 23 +  47401472 g--taat-tt-ata-ca--ta---aattt-t---ta-a
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  34220 24 -     48017 G--AAAT-TT-AAA-CA--TT---AAAATTG---TA-A
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               22416 22 -     32043 G--GAAT-TT-ATA-CA--CA---AGATT-T---TA--
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 I 1
s Microtus_ochrogaster.CM001673.1                        22819805 23 -  98408828 G--GAAT-TT-ATA-CA--TG---GAAG-TT---TA-A
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8209409 21 +  10048721 g--gaaT-TT-ATG-CA--CA---TGA-T-T---GA--
i Miniopterus_natalensis.LDJU01000022.1                 C 0 I 17
s Miniopterus_schreibersii.MinSch_scaffold_24116            34063 21 +     45743 G--GAAT-TT-ATG-CA--CA---TGA-T-T---GA--
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 I 17
s Miopithecus_ogouensis.k141_2935907                         1814 25 +     29742 CAGGAAT-TT-ATA-AA--TG---AAATT-T---TT-A
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        11217 21 -    104932 G--GAAT-TT-ATA-CA--CA---AG-TT-T---TA--
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 I 1
s Mirza_zaza.k141_226143                                     5376 23 +      8497 G--TAAT-TT-ATA-CA--TA---AATTT-T---TA-A
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 146121 23 +    154973 G--GAAT-TT-GTA-CA--CA---AGGTT-TT--AA--
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                160937 22 +    265003 G--GAAT-TT-ATA-CA--CA---AGATT-T---TA--
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 I 1
s Moschus_moschiferus.MosMos_scaffold_78805                  1201 23 -     19904 G--AAAT-TT-ATG-CA--CA---ATATT-TT--AA--
i Moschus_moschiferus.MosMos_scaffold_78805             I 479 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  144635 22 -    168139 G--GAAT-TT-ATA-AA--TA---AGATT-T---TA--
i Mungos_mungo.MunMun_flattened_line_8729               C 0 I 1
s Murina_feae.MurFea_scaffold_2254                          19268  9 -    100666 G--GAAT-AA-AT-------------------------
i Murina_feae.MurFea_scaffold_2254                      C 0 I 18
s Mus_caroli.LT608236.1                                  70766309 23 +  92629107 g--gAAT-TT-ATA-CA--TT---AAAG-TT---TA-A
i Mus_caroli.LT608236.1                                 C 0 I 10
s Mus_musculus.chr16                                     75489368 23 +  98207768 G--GAAT-TT-ATA-CA--TT---AAAG-TT---TA-A
i Mus_musculus.chr16                                    C 0 I 10
s Mus_pahari.LT608305.1                                  67555596 23 +  89017189 G--GAAT-TT-ATA-CA--TT---AAAG-TT---TA-A
i Mus_pahari.LT608305.1                                 C 0 I 10
s Mus_spretus.CM004110.1                                 74330546 23 +  97876770 G--GAAT-TT-ATA-CA--TT---AAAG-TT---TA-A
i Mus_spretus.CM004110.1                                C 0 I 10
s Muscardinus_avellanarius.MusAve_scaffold_9643             11586 22 +     98495 A--AAAT-TT-CTA-CA--TA---A-AT--T--ATA-A
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 I 9
s Mustela_putorius.JH417978.1                             4424076 22 -  28371801 g--GAAT-TT-ATA-CA--CA---AAATT-T---TA--
i Mustela_putorius.JH417978.1                           C 0 I 1
s Myocastor_coypus.MyoCoy_scaffold_3653                     89741 13 -    117718 --------------------AATGAAAT--T---TTAA
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 10 C 0
s Myotis_brandtii.KE161952.1                               967566 22 +   8389877 g--gaGT-TT-ATA-CA--CAA---GATT-T---TA--
i Myotis_brandtii.KE161952.1                            C 0 I 17
s Myotis_davidii.KB114863.1                               5019243 22 +   6462685 g--GAAT-TT-ATA-CA--CAA---GATT-T---TA--
i Myotis_davidii.KB114863.1                             C 0 I 17
s Myotis_lucifugus.GL429887.1                             3465147 22 -   3747815 g--gaaT-TT-ATA-CA--CAA---GATT-T---TA--
i Myotis_lucifugus.GL429887.1                           C 0 I 17
s Myotis_myotis.MyoMyo_scaffold_6123                        10361 22 +     66751 G--GAAT-TT-ATA-CA--CAA---GATT-T---TA--
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 I 17
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             4764 23 -      8794 G--GAAT-TT-ATG-CA--CA---GGATT-T---TA-G
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL199251.1                           8590302 23 -  12625532 G--GAAT-TT-ATA-CA--GA---AATT-TT---TA-A
i Nannospalax_galili.KL199251.1                         n 23 I 31
s Nasalis_larvatus.k141_153429                               8315 25 +     48152 CAAGAAT-TT-ATA-AA--TG---AAACT-T---TT-A
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4484609 21 -  14209539 G--GAAT-TT-ATA-CA--CA---AG-TT-T---TA--
i Neomonachus_schauinslandi.NINY01007774.1              C 0 I 1
s Neophocaena_asiaeorientalis.KZ688543.1                  3950733 23 -   4490290 g--gaat-tt-gtA-CA--CA---AGGTT-TT--AA--
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  49028 22 +     94413 G--TAAT-TT-TTT-CA--CA---AGATT-T---TA--
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 I 1
s Nomascus_annamensis.k141_220265                             237 25 +      1763 CAAGAAT-TT-CTA-TA--TA---AAATT-T---TT-A
i Nomascus_annamensis.k141_220265                       C 0 C 0
s Nomascus_concolor.k141_226614                              1030 25 -      5092 CAAGAAT-TT-CTA-TA--TA---AAATT-T---TT-A
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_642452                            1813 25 +      2851 CAAGAAT-TT-CTA-TA--TA---AAATT-T---TT-A
i Nomascus_gabriellae.k141_642452                       C 0 I 196
s Nomascus_siki_b.tarseq_80                             24748 25 -  18771707 CAAGAAT-TT-CTA-TA--TA---AAATT-T---TT-A
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  2451 25 +      4512 CAAGAAT-TT-CTA-TA--TA---AAATT-T---TT-A
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                30651 22 +   3668941 G--GAAT-TT-ATA-CA--CA---AGATT-T---TA--
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 I 1
s Nycticebus_bengalensis.LG16                            65566846 23 -  95554990 G--TAAT-CC-ATA-CA--TA---AAATT-T---TA-A
i Nycticebus_bengalensis.LG16                           I 1 C 0
s Nycticebus_coucang.k141_2051882                            3575 23 +      6470 G--TAAT-CC-ATA-CA--TA---AAATT-T---TA-A
i Nycticebus_coucang.k141_2051882                       I 1 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65669180 23 +  89412551 G--TAAT-CC-ATA-CA--TA---AAATT-T---TA-A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     I 1 C 0
s Octodon_degus.JH651621.1                                3685300 10 +  10294119 --------------------a---aaat--t---ttaa
i Octodon_degus.JH651621.1                              I 9 C 0
s Ochotona_princeps.JH802095.1                            4995749  7 -  23139505 g--aaat-tt----------------------------
i Ochotona_princeps.JH802095.1                          C 0 I 7
s Odobenus_rosmarus.KB229369.1                             679274 21 -   3126709 g--gGAT-TT-ATA-CA--CA---AG-TT-T---TA--
i Odobenus_rosmarus.KB229369.1                          C 0 I 1
s Odocoileus_virginianus.KZ101650.1                       1079408 23 +   1425656 g--gaat-tt-atg-CA--CA---AGGTT-TT--AA--
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         36705 23 +     78940 g--gaat-tt-atg-CA--CA---AGGTT-TT--AA--
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  125058 23 +    145789 G--GAAT-TT-ATA-TG--TG---GAAG-TT---TA-A
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  36859 22 +     62360 G--AAAT-TT-ATA--A--TG---GAAG-CC---TA-A
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7224418 23 -   7562323 g--gaat-tt-gta-CA--CA---AGGTT-TT--AA--
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              57262 23 -     66828 G--ATAT-TT-AAA-CA--CA---AAAAT-T---TA-G
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141876022 11 + 163896628 g--gaat-tt-t-t-ta---------------------
i Oryctolagus_cuniculus.CM000803.1                      C 0 I 22
s Otocyon_megalotis.JAEUCK010005121.1                      307937 22 -    505867 g--gaat-tT-ATA-CA--CA---AGATT-T---TA--
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 I 1
s Otolemur_crassicaudatus.k141_505435                         477 23 -     53940 G--TAAT-CT-ATA-CA--TA---AAATT-T---TA-A
i Otolemur_crassicaudatus.k141_505435                   I 1 C 0
s Otolemur_garnettii.GL873528.1                          18008448 23 -  38779656 g--taat-ct-ata-ca--ta---aaatt-t---ta-a
i Otolemur_garnettii.GL873528.1                         I 1 C 0
s Ovis_aries.CM001582.2                                 134076966 23 - 275406953 g--aaat-gt-atg-cA--TA---AGGTT-TT--AA--
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      78180 23 +    140051 G--AAAT-TT-ATG-CA--TA---AGGTT-TT--AA--
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127574460 25 - 205426864 caagaat-tt-ata-ta--ta---aaatt-t---tt-a
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120151613 25 - 196562556 caagaat-tt-ata-ta--ta---aaatt-t---tt-a
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  34051 22 +    295523 G--GAAT-TT-ATA-CA--TA---AGATT-T---TA--
i Panthera_onca.PanOnc_flattened_line_1615              C 0 I 1
s Panthera_pardus.KV860323.1                              3637787 22 +  18214204 g--gaat-tt-ata-ca--tA---AGATT-T---TA--
i Panthera_pardus.KV860323.1                            C 0 I 1
s Panthera_tigris.KE721879.1                              5027460 22 -   6340057 g--gaat-tt-ata-ca--tA---AGATT-T---TA--
i Panthera_tigris.KE721879.1                            C 0 I 1
s Pantholops_hodgsonii.KE114631.1                         1065826 23 -   1292953 g--aaat-tt-atg-cA--TA---AGGTT-TT--AA--
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188156049 25 - 188283584 caggaat-tt-ata-aa--tg---aaatt-t---tt-a
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             4365 25 +      5367 CAGGAAT-TT-ATA-AA--TG---AAATT-T---TT-A
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47513434 25 +  47705337 CAGGAAT-TT-ATA-AA--TG---AAATT-T---TT-A
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 67413 25 -    104429 CAGGAAT-TT-ATA-AA--TG---AAATT-T---TT-A
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    5946 25 +     14967 CAGGAAT-TT-ATA-AA--TG---AAATT-T---TT-A
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 1806 25 -      7628 CAGGAAT-TT-ATA-AA--TG---AAATT-T---TT-A
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    115512 22 -    135482 G--GAAT-TA-ATA-CA--CA---AGATT-T---TA--
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 I 1
s Perodicticus_ibeanus.k141_117958                           5169 23 -     23713 G--TAAT-CT-ATA-TG--TA---AAATT-T---TA-A
i Perodicticus_ibeanus.k141_117958                      I 1 C 0
s Perodicticus_potto.k141_713187                            24481 23 -     27972 G--TAAT-CT-ATA-TG--TA---AAATT-T---TA-A
i Perodicticus_potto.k141_713187                        I 1 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      44306 24 -     45160 G--GGAC-TT-ATG-TG--TAA-AAAAT--T---TA-A
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4950096 22 -   8017169 G--AAAT-TT-ATA--A--TG---GAAG-CT---TA-A
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    12202 23 -     36578 C--AAAT-GT-ATA-CA--GA---AAGT--G---TTAA
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            121023 23 -    122454 G--GAAT-TT-GTA-CA--CA---AGGTT-TT--AA--
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1987485                           1834 25 -      5908 CAAGAAT-TT-ATA-AA--TG---AAATT-T---TT-A
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       2458 25 -     17985 CAAGAAT-TT-ATA-AA--TG---AAATT-T---TT-A
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            1825 25 +      7694 CAAGAAT-TT-ATA-AA--TG---AAATT-T---TT-A
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26740303 25 +  26888534 caagaat-tt-ata-aa--tg---aaatt-t---tt-a
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            97185 21 +    112873 G--GAAT-TC-ATA-CA--CA----GATT-T---TA--
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 I 17
s Pithecia_albicans.k141_991845                             43432 25 -     61926 CAAGAAT-TT-ATA-CA--TA---AAATT-T---TA-A
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        24863 25 +     78826 CAAGAAT-TT-ATA-CA--TA---AAATT-T---TA-A
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              8812 25 -     15800 CAAGAAT-TT-ATA-CA--TA---AAATT-T---TA-A
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        12010 25 -     16101 CAAGAAT-TT-ATA-CA--TA---AAATT-T---TA-A
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          5319 25 +      9673 CAAGAAT-TT-ATA-CA--TA---AAATT-T---TA-A
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13474315 25 -  19735023 CAAGAAT-TT-ATA-CA--TA---AAATT-T---TA-A
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           13221 25 -     31692 CAAGAAT-TT-ATA-CA--TA---AAATT-T---TA-A
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           5110 23 +     21690 G--GAAT-TT-GTA-CA--CA---AGGTT-TT--AA--
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       22661 25 +     44506 CAAGAAT-TT-ATA-CA--TA---AAATT-T---TA-A
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        22874 25 +     67491 CAAGAAT-TT-ATA-CA--TA---AAATT-T---TA-A
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      13113 25 -     98129 CAAGAAT-TT-ATA-CA--TA---AAATT-T---TA-A
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     22713 25 +    147771 CAAGAAT-TT-ATA-CA--TA---AAATT-T---TA-A
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        22968 25 -     23762 CAAGAAT-TT-ATA-CA--TA---AAATT-T---TA-A
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          3434 25 -     55515 CAAGAAT-TT-ATA-CA--TA---AAATT-T---TA-A
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         22787 25 +    152463 CAAGAAT-TT-ATA-CA--TA---AAATT-T---TA-A
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                        504 25 -    119457 CAAGAAT-TT-ATA-CA--TA---AAATT-T---TA-A
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         12509 25 +    134592 CAAGAAT-TT-ATA-CA--TA---AAATT-T---TA-A
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          23097 25 -     75465 TAAGAAT-TT-ATA-CA--TA---AAATT-T---TA-A
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              186982 26 -    373494 caagaat-ttaata-ta--ta---aaatt-t---tt-a
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19807630 26 +  19899266 CAAGAAT-TTAATA-TA--TA---AAATT-T---TT-A
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               5560 25 -     15069 CAAGAAT-TT-ATA-AA--TG---AAACT-T---TT-A
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              5694 25 +     14865 CAAGAAT-TT-ATA-AA--TG---AAACT-T---TT-A
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                1454 21 -      9567 G--AAAT-TT-AA---A--GG---AGATT-T---TA-T
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 I 2
s Prolemur_simus.MPIZ01000048.1                           6848348 23 +  12164890 G--TAAt-tt-gta-ca--ta---aattt-t---ta-a
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coronatus.k141_1353159                         3406 23 +     11805 G--TAAT-TT-ATA-CA--TA---AATTT-T---TA-A
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           42748 23 +     52369 G--TAAT-TT-ATA-CA--TA---AATTT-T---TA-A
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         35134 23 -     44753 G--TAAT-TT-ATA-CA--TA---AATTT-T---TA-A
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            17058 23 +     27322 G--TAAT-TT-ATA-CA--TA---AATTT-T---TA-A
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       16694 23 -     53241 G--TAAT-TT-ATA-CA--TA---AATTT-T---TA-A
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         38959 23 -     48185 G--TAAT-TT-ATA-CA--TA---AATTT-T---TA-A
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           34009  6 +     77221 G--GAAT-T-----------------------------
i Psammomys_obesus.NESX01026517.1                       C 0 I 5
s Pteronotus_parnellii.KE867983.1                            3581 22 -     27784 G--GAAT-TT-ATA-CA--CA---AGATT-T---TA--
i Pteronotus_parnellii.KE867983.1                       C 0 I 1
s Pteronura_brasiliensis.PteBra_flattened_line_1343        246385 22 -    344369 G--GAAT-TT-ATA-CA--CA---AGATT-T---TA--
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 I 1
s Pteropus_alecto.KB031157.1                             13245692 22 -  17261082 g--gaat-tt-atA-CA--CA---AGGTT-T---TA--
i Pteropus_alecto.KB031157.1                            C 0 I 1
s Pteropus_vampyrus.KN525959.1                             603642 22 -   3946241 g--gaat-tt-atA-CA--CA---AGGTT-T---TA--
i Pteropus_vampyrus.KN525959.1                          C 0 I 1
s Puma_concolor.QAVW01000427.1                          131534046 13 - 161321710 g--gaat-tt-ata-ca--t------------------
i Puma_concolor.QAVW01000427.1                          C 0 I 2
s Pygathrix_cinerea.k141_374971                             29678 25 +     56732 CAAGAAT-TT-ATA-AA--TG---AAACT-T---TT-A
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6806169 25 +   6970761 CAAGAAT-TT-ATA-AA--TG---AAACT-T---TT-A
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             5563 25 +     18040 CAAGAAT-TT-ATA-AA--TG---AAACT-T---TT-A
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                15485 23 +     68503 G--GAAT-TT-ATG-CA--CA---AGGTT-TT--AA--
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13915313 23 +  90463843 G--GAAT-TT-ATA-GA--TT---AAAG-TT---TA-A
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1787529 22 +   2252614 g--gaat-tc-aTA-TA--CA---AGATT-T---TA--
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 I 1
s Rhinopithecus_bieti.k119_1391695                           1791 25 -      1866 CAAGAAT-TT-ATA-AA--TG---AAACT-T---TT-A
i Rhinopithecus_bieti.k119_1391695                      C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206377448 25 - 206558726 CAagaat-tt-ata-aa--tg---aaact-t---tT-A
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44856348 25 -  45163003 CAAGAAT-TT-ATA-AA--TG---AAACT-T---TT-A
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                19018 22 +    109198 G--GAAT-TT-ATA-CA--CA---AGGTT-T---TA--
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 I 1
s Saiga_tatarica.SaiTat_scaffold_82192                       7652 23 +     12214 G--AAAT-TT-ATG-CA--TA---AGGTT-TT--AA--
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15672527 25 -  43202129 caagaat-tt-ata-ca--ta---aaatt-t---ta-a
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        4444 25 +     34089 CAAGAAT-TT-ATA-CA--TA---AAATT-T---TA-A
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              4385 25 -     60842 CAAGAAT-TT-ATA-CA--TA---AAATT-T---TA-A
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              4480 25 +     67014 CAAGAAT-TT-ATA-CA--TA---AAATT-T---TA-A
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              4458 25 +     60816 CAAGAAT-TT-ATA-CA--TA---AAATT-T---TA-A
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 4395 25 -     76454 CAAGAAT-TT-ATA-CA--TA---AAATT-T---TA-A
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17341120 25 -  30362882 CAAGAAT-TT-ATA-CA--TA---AAATT-T---TA-A
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         20479 25 -     62485 CAAGAAT-TT-ATA-CA--TA---AAATT-T---TA-A
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   32007 22 -    114521 G--GAAT-TT-ATG-CA--GA---ATATT-T---CA--
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        3175 25 +     15331 CAAGAAT-TT-ATA-AA--TG---AAACT-T---TT-A
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       8572 25 +     20762 CAAGAAT-TT-ATA-AA--TG---AAACT-T---TT-A
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         118574 25 +    130994 CAAGAAT-TT-ATA-AA--TG---AAACT-T---TT-A
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           37361 25 +     46263 CAAGAAT-TT-ATA-AA--TG---AAACT-T---TT-A
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     30475 25 +     42640 CAAGAAT-TT-ATA-AA--TG---AAACT-T---TT-A
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        13519 25 +     30600 CAAGAAT-TT-ATA-AA--TG---AAACT-T---TT-A
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  100042 23 -    120886 G--AAAT-TT-ATA-CA--TG---TAAA-TT---TA-A
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            18584 22 +    739146 A--GAAT-TT-ATA-CA--CA---ATATT-T---CA--
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2239501 23 +   2842873 a--gaat-ca-gtt-CA--TG---AAAG--CT--TA-A
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             234505 22 -    276980 G--GAAT-TT-ATA-CA--CA---AGATT-T---TA--
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 I 1
s Suricata_suricatta.SurSur_flattened_line_20339            27297 22 +     62062 G--GAAT-TT-ATA-AA--TA---AGATT-T---TA--
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 I 1
s Sus_scrofa.CM000824.4                                 189271566 22 + 218635234 g--gaat-tt-ata-cC--AA---AGATT-T---AA--
i Sus_scrofa.CM000824.4                                 I 1 C 0
s Symphalangus_syndactylus.tarseq_24                        14733 25 -  13920577 CAAGAAT-GT-CTA-TA--TA---AAATT-T---TT-A
i Symphalangus_syndactylus.tarseq_24                    C 0 I 31
s Tadarida_brasiliensis.TadBra_scaffold_145589               5753 22 -      6213 G--GAAT-TT-ATA-CA--CA---AGATT-T---TA--
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 I 259
s Tamandua_tetradactyla.TamTet_scaffold_26877               14427 23 +     45698 G--GAAT-TT-ATG-CA--CA---GGATT-T---TA-G
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      806843 23 +   1148477 G--GAAT-TT-ATA-CA--CA---ACATT-TT--AA--
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  57538 23 +     99546 G--GAAT-TT-ATA-CA--CA---ACATT-TT--AA--
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               26258 25 +     42269 ATGGAAT-TT-ATA-CA--TA---AAATT-T---TA-A
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               59574 25 +     65473 ATGGAAT-TT-ATA-CA--TA---AAATT-T---TA-A
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194007575 25 - 194193292 caggaat-tt-ata-aa--tg---aaatt-t---tt-a
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  5258 23 +      6782 G--GAAT-TT-ATG-TA--CA---AGATT-T---TA-A
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  135573 22 -    259118 G--GAAT-TT-ATA-CA--CA---AGATT-G---TA--
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 I 1
s Trachypithecus_auratus.k141_738098                        26679 25 +     38948 CAAGAAT-TT-ATA-AA--TG---GAACT-T---TT-A
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   20408 25 -     32910 CAAGAAT-TT-ATA-AA--TG---AAACT-T---TT-A
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      1796 25 -     12939 CAAGAAT-TT-ATA-AA--TG---GAACT-T---TT-A
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       1730 25 -     14244 CAAGAAT-TT-ATA-AA--TG---AAACT-T---TT-A
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           43129 25 -     54611 CAAGAAT-TT-ATA-AA--TG---AAACT-T---TT-A
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                         935 25 -     11566 CAAGAAT-TT-ATA-AA--TG---GAACT-T---TT-A
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     3107 25 -     15592 CAAGAAT-TT-ATA-AA--TG---AAACT-T---TT-A
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          1764 25 +     14371 CAAGAAT-TT-ATA-AA--TG---AAACT-T---TT-A
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  51515 25 +     51589 CAAGAAT-TT-ATA-AA--TG---AAACT-T---TT-A
i Trachypithecus_leucocephalus.k141_283605              I 15 C 0
s Trachypithecus_melamera.k141_238507                       14697 25 +     14732 CAAGAAT-TT-ATA-AA--TG---AAACT-T---TT-A
i Trachypithecus_melamera.k141_238507                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       5168 25 -     28054 CAAGAAT-TT-ATA-AA--TG---AAACT-T---TT-A
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44659968 25 -  44834318 CAAGAAT-TT-ATA-AA--TG---AAACT-T---TT-A
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       2272 25 +     13828 CAAGAAT-TT-ATA-AA--TG---AAACT-T---TT-A
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   4877 23 +     90398 G--GAAT-TT-ATG-CA--CA---ATGTT-TT--GA--
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16084618  9 +  31416278 G--AAAT-TT-AA-------------------------
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2792624 23 -   3938065 G--GAAT-TT-GTG-CA--TA---AAATT-G---TA-A
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    4838 23 +     13056 G--GAAC-TT-GTG-CA--TA---AAATT-G---TA-A
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69313133 23 -  96451834 g--gaat-tt-gta-CA--CA---AGGTT-TT--AA--
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   1037 22 +     10241 G--GAAT-TT-ATG-CA--GA---ATATT-T---CA--
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6514522 22 +  28682327 g--gaat-tt-atA-CA--CA---AGATT-T---TA--
i Ursus_maritimus.KK498671.1                            C 0 I 1
s Varecia_rubra.k141_432109                                  5050 23 -     20643 G--TAAT-TT-ATA-CA--TA---AATTT-T---TA-A
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             24591 23 -     33872 G--TAAT-TT-ATA-CA--TA---AATTT-T---TA-A
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1524378 23 -   2331223 g--gaat-tt-ata-cA--CA---AGATT-TT--AA--
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                138029 22 -    281493 G--GAAT-TT-ATA-CA--CA---AGATT-T---TA--
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 I 1
s Xerus_inauris.XerIna_scaffold_7898                       126609 23 -    134049 A--GGAT-CA-GTT-CA--TA---AAGT--CT--TA-A
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        214000 21 -    227762 G--GGAT-TT-ATA-CA--CA---AG-TT-T---TA--
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 I 1
s Zapus_hudsonius.ZapHud_scaffold_64392                     14719 23 -     20485 G--AAAC-TT-ATA-CA--TA---AAAT-TT---TA-A
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           6631 25 -      8775 C--GAAT-TT-GTA-CACGCA---AGGTT-TT--AA--
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             38964  0 -     47444 C
e Sorex_araneus.JH798170.1                               17750754 3364 -  27805282 I
e Erinaceus_europaeus.JH835290.1                         11534163  4 +  16010500 I
e Hylobates_pileatus_a.tarseq_592                             33391 319 -     60944 I
e Propithecus_coquerelli.NW_012147997.1                    667273 6500 -   2312742 I
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               11602 31 +    209709 C-T-C-AGAAGCAG----AT--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
s Acinonyx_jubatus.LLWD01000356.1                         2033722 30 +   3721120 C-T-T-ATAAGCAA----AT--------At-c-tcaa-a-t---------a--a--a--gt-a----a---a-
i Acinonyx_jubatus.LLWD01000356.1                       I 2 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    112347 32 -    189883 C-T-T-GTGAATTA--CACT--------TG-T-GTGC-T-A---------G--C--A--GT-A----A---G-
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10657057 30 +  23371972 C-C-T-ATAACCAA----AT--------AT-c-tcca-a-a---------a--a--a--gt-a----a---a-
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 1 C 0
s Ailurus_fulgens.LNAC01000003.1                          7094400 30 -  16596857 C-C-T-ATAAGCAA----AT--------AT-C-tcca-a-a---------a--a--a--gt-a----a---a-
i Ailurus_fulgens.LNAC01000003.1                        I 1 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   16638 21 -     22067 C-T-T-ATAAGTAG----TT--------AG-C-TTGA-A----------------------------------
i Allactaga_bullata.AllBul_scaffold_70162               C 0 I 8
s Allenopithecus_nigroviridis.k141_2469532                   1093 31 -     60446 C-T-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         1815 31 -     29318 C-T-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                          750 31 +     38766 C-T-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          1709 31 -     80423 C-T-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            10006 31 -     18050 C-T-T-ATAAGCAG----TT--------AT-G-TCAC-G-A---------A--A--A--GT-A----T---GG
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                 11099 31 -     11521 C-T-T-ATAAGCAG----GT--------AT-G-TCAC-G-A---------A--A--A--GT-A----T---GG
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                             10683 31 -     21359 C-T-T-ATAAGCAG----TT--------AT-G-TCAC-G-A---------A--A--A--GT-A----T---GG
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                 298 31 +      2129 T-T-T-ATAAGCAG----GT--------AT-G-TCAA-G-A---------A--A--A--GT-A----T---GG
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                          9982 31 -     10438 C-T-T-ATAAGCAG----GT--------AT-G-TCAA-G-A---------A--A--A--GT-A----T---GG
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            6638 31 +      7047 C-T-T-ATAAGCAG----GT--------AT-G-TCAC-G-A---------A--A--A--GT-A----T---GG
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             9918 31 +     10410 C-T-T-ATAAGCAG----GT--------AT-G-TCAC-G-A---------A--A--A--GT-A----T---GG
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            3726 31 -      4927 C-T-T-ATAAGCAG----GT--------AT-G-TCAA-G-A---------A--A--A--GT-A----T---GG
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3519847 30 +   4113121 C-C-T-ATAATCAA----AT--------AT-C-tcac-a-a---------a--a--t--gt-a----a---a-
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      390054 33 -    631301 C-C-T-ATAAACAA----GT--------AC-C-TTGC-A-A---------A--A--G--CT-AA-TTT---T-
i Anoura_caudifer.AnoCau_scaffold_422                   I 1 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            30434 29 +     33004 C-C-T-ATAAGCAA----AT--------AT-C-TCAC-A-A---------A--A--A--GT-A----A-----
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 I 1
s Aotus_azarae.k141_3170768                                 62366 31 +     78111 C-T-T-ATAAGCAG----AT--------AT-G-TCAC-T-A---------A--A--C--GT-A----T---AG
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            5309 31 +     22701 C-T-T-ATAAGCAG----AT--------AT-G-TCAC-T-A---------A--A--C--GT-A----T---AG
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5749265 31 +   9889416 c-t-t-ataAGCAG----AT--------AT-G-TCAC-T-A---------A--a--c--gt-a----t---ag
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             5851 31 -    104377 C-T-T-ATAAGCAG----AT--------AT-G-TCAC-T-A---------A--A--T--GT-A----T---AG
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               5853 31 +     23246 C-T-T-ATAAGCAG----AT--------AT-G-TCAC-T-A---------A--A--T--GT-A----T---AG
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     3444 30 +      5067 C-T-T-ATAAGAAC----AC--------AG-C-TCAC-A-A---------A--A--A--GT-A----A---G-
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_587554                         790 30 +      9265 C-T-T-ATAAACAG----AT--------AT-C-TCCC-C-A---------A--A--A--GT-A----A---A-
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 8462 33 -     29036 C-C-T-ATAAACAA----GT--------AT-C-TCAC-A-A---------A--A--A--TT-AA-TTT---T-
i Artibeus_jamaicensis.ArtJam_scaffold_41619            I 1 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9539113 31 +  39197703 C-T-T-ATAAGCAG----GT--------AT-G-TCAC-T-A---------A--A--A--GT-A----T---GG
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             60386 31 +     85812 C-T-T-ATAAGCAG----GT--------AT-G-TCAC-T-A---------A--A--A--GT-A----T---GG
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                11398 31 +     89302 C-T-T-ATAAGCAG----GT--------AT-G-TCAC-T-A---------A--A--A--GT-A----T---GG
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             15901 31 -     58268 C-T-T-ATAAGCAG----GT--------AT-G-TCAC-T-A---------A--A--A--GT-A----T---GG
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             63894 31 +    119057 C-T-T-ATAAGCAG----GT--------AT-G-TCAC-T-A---------A--A--A--GT-A----T---GG
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               5863 31 -     25888 C-T-T-ATAAGCAG----GT--------AT-G-TCAC-T-A---------A--A--A--GT-A----T---GG
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 6513 28 -     16375 C-T-T-ATATGCAG----AT--------AT-C-TCAC-A-A---------A--A--A--GT-A----------
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                                133 28 +      6337 C-T-T-ATATGCAG----AT--------AT-C-TCAC-A-A---------A--A--A--GT-A----------
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26379931 30 +  51448160 C-C-T-ATAAGCAA----AT--------AT-C-TCAC-A-A---------A--A--A--GT-A----A---A-
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        5100 30 -     13118 N-N-N-NNNAGCAA----AT--------AT-C-TCAC-A-A---------A--A--A--GT-A----A---A-
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   42915 30 -     72089 C-C-T-ATAAGCAA----AT--------AT-C-TCAC-A-A---------A--A--T--GT-A----A---A-
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6559588 30 +   6870073 C-C-T-ATAAGCAA----AT--------AT-c-tcac-a-a---------a--a--a--gt-a----a---a-
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138139692 30 - 161108492 C-C-T-ATAAGCAA----AT--------AT-c-tcac-a-a---------a--a--a--gt-a----a---a-
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     572230 30 -    998990 C-C-T-ATAAGCAA----AT--------AT-c-tcac-a-a---------a--a--a--gt-a----a---a-
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136295425 30 - 158972876 C-C-T-ATAAGCAA----AT--------AT-c-tcac-a-a---------a--a--a--gt-a----a---a-
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1232508 30 -   1914593 C-C-T-ATAAGCAA----AT--------AT-C-tcac-a-a---------a--a--a--gt-a----a---a-
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               113749 31 -    171031 C-T-T-ATAAGCAG----AT--------AA-G-TCAC-T-G---------A--A--A--GC-A----T---GG
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 12780 31 +    125063 C-T-T-ATAAGCAG----AT--------AA-G-TCAC-T-G---------A--A--A--GC-A----T---GG
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                14822 31 -    216513 C-T-T-ATAAGCAG----AT--------AA-G-TCAC-T-G---------A--A--A--GC-A----T---GG
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        7365 31 -    134917 C-T-T-ATAAGCAG----AT--------AA-G-TCAC-T-G---------A--A--A--GC-A----T---GG
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3219297 30 -   8989139 C-C-T-ATAAGCAA----AT--------AT-c-ttac-a-a---------a--a--a--gt-t----a---a-
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           396999 30 -  15254737 C-C-T-ATAAGCAA----AT--------AT-c-ttac-a-a---------a--a--a--gt-t----a---a-
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2972734 30 +   6889770 C-C-T-ATAAGCAA----AT--------AT-c-ttac-a-a---------a--a--a--gt-t----a---a-
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11519216 30 +  39901454 C-C-T-ATAAGCAA----AT--------AT-G-TCCA-A-A---------A--A--A--GT-A----A---A-
i CanFam4.chr31                                         I 1 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   14241 30 +     87036 C-C-T-ATATGCAA----AT--------AT-G-TCCA-A-A---------A--A--A--GT-A----A---A-
i Canis_lupus_VD.CanFam_VD_scaffold_16982               I 1 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11265883 30 -  35597290 C-C-T-ATAAGCAA----AT--------AT-g-tcca-a-a---------a--a--a--gt-a----a---a-
i Canis_lupus_dingo.QKWQ01001993.1                      I 1 C 0
s Canis_lupus_familiaris.chr31                           11088417 30 +  39895921 C-C-T-ATAAGCAA----AT--------AT-g-tcca-a-a---------a--a--a--gt-a----a---a-
i Canis_lupus_familiaris.chr31                          I 1 C 0
s Canis_lupus_orion.HG994411.1                           16455432 30 -  44759192 C-C-T-ATAAGCAA----AT--------AT-g-tcca-a-a---------a--a--a--gt-a----a---a-
i Canis_lupus_orion.HG994411.1                          I 1 C 0
s Capra_aegagrus.CM003214.1                              21324923 30 + 157394656 C-C-T-ATAAGCAA----AT--------AT-C-tcac-a-a---------a--a--t--gt-a----a---a-
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135706150 30 - 157403528 C-C-T-ATAAGCAA----AT--------AT-C-Tcac-a-a---------a--a--t--gt-a----a---a-
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          308800 30 +    345090 c-t-t-aTAAGCAG----AT--------AT-C-TCAT-A-A---------A--A--A--GT-A----A---G-
i Carlito_syrichta.NW_007248099.1                       C 0 I 1
s Carollia_perspicillata.CarPer_scaffold_4436               59256 33 +     67245 C-C-T-ATAAACAA----GT--------GT-C-TCAC-G-A---------A--A--A--TT-AA-TTT---T-
i Carollia_perspicillata.CarPer_scaffold_4436           I 1 C 0
s Castor_canadensis.CasCan_scaffold_47037                   30462 30 +     33760 C-T-T-ATAAGTGG----AT--------AG-C-TCAC-A-A---------A--A--A--GT-A----A---G-
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   158615 27 -    276539 C-C-T-CTAAGTAA----T----------T-C-TCAC-A-A---------A--A--A--GT-A----A-----
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15786343 16 -  24422027 -----------------------------G-T-Tcac-a-a---------a--a--a--gc-a----t---t-
i Cavia_aperea.AVPZ01000278.1                           I 10 C 0
s Cavia_porcellus.DS562889.1                             15798278 16 -  24440124 -----------------------------G-t-tcac-a-a---------a--a--a--ga-a----t---t-
i Cavia_porcellus.DS562889.1                            I 10 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       176469 16 +    436027 -----------------------------G-T-TCAC-A-A---------A--A--A--GA-A----T---T-
i Cavia_tschudii.CavTsc_scaffold_488                    I 10 C 0
s Cebus_albifrons.Contig22                               18890601 31 -  29618158 C-T-T-ATCAGCAG----AT--------AT-G-TCAC-T-A---------A--A--A--GT-A----T---GG
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 8145 31 -     26817 C-T-T-ATCAGCAG----AT--------AT-G-TCAC-T-A---------A--A--A--GT-A----T---GG
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                12385 31 +     25043 C-T-T-ATCAGCAG----AT--------AT-G-TCAC-T-A---------A--A--A--GT-A----T---GG
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         7835 30 +     21754 C-T-T-ATAAGCAG----AT--------AT-C-TCAT-A-A---------A--A--A--GT-A----A---G-
i Cephalopachus_bancanus.k141_702587                    C 0 I 1
s Ceratotherium_simum.JH767818.1                          4363611 29 +   7569818 C-C-T-CTAATCAA----AT--------At-c-tcac-a-a---------a--a--a--gt-a----a-----
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         3368 29 -      9338 C-C-T-CTAATCAA----AT--------AT-C-TCAC-A-A---------A--A--A--GT-A----A-----
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6555038 31 +   6739814 c-t-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--A--a--gt-a----t---ga
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      26515 31 +     60454 C-T-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          1720 31 -     21101 C-T-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GA
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         59030 31 -    107033 C-T-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GA
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        1922 31 -     17608 C-T-T-ATAAGCAG----AG--------AG-C-TTAC-A-A---------A--A--A--GT-A----T---GG
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          29417 31 +     30494 C-T-T-ATAAGCAG----AG--------AG-C-TTAC-A-A---------A--A--A--GT-A----T---GG
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          58263 31 -     59240 C-T-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GA
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          1964 31 +     16677 C-T-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           24122 31 +     35983 C-T-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11990650 31 +  12117833 C-T-T-ATAAGCAG----AG--------AG-C-TTAC-A-A---------A--A--A--GT-A----T---GG
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46477408 31 +  46592721 C-T-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      40959 31 -     45581 C-T-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       1965 31 +     35577 C-T-T-ATAAGCAG----AG--------AG-C-TTAC-A-A---------A--A--A--GT-A----T---GG
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        1741 31 -     25661 C-T-T-ATAAGCAG----AG--------AG-C-TTAC-A-A---------A--A--A--GT-A----T---GG
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        1719 31 -     17744 C-T-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        21335 31 +     37128 C-T-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           2525 30 -      6963 C-A-C-ATAAGCAA----CT--------TT-C-TCCC-A-A---------A--A--A--GT-A----A---A-
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           58798 30 -     68416 C-T-T-ATATGCAG----AT--------AT-C-TCAC-A-A---------A--A--A--GT-A----A---G-
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            7842 30 +     13308 C-T-T-ATATGCAG----AT--------AT-C-TCAC-A-A---------A--A--A--GT-A----A---G-
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             5403 31 -     18223 C-T-T-ATAAGCAG----AT--------AA-G-TCAC-T-G---------A--A--A--GT-A----T---GG
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             22426 29 +     25473 C-T-T-ATAAGCAG----A----------T-G-TCAC-T-G---------A--A--A--GT-A----T---GG
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           41461 31 +     57117 C-T-T-ATAAGCAG----AT--------AA-G-TCAC-T-G---------A--A--A--GT-A----T---GG
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          46140 31 +     54541 C-T-T-ATAAGCAG----AT--------AA-G-TCAC-T-G---------A--A--A--GT-A----T---GG
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15961512 16 +  43084221 -----------------------------G-A-TCac-a-a---------a--a--a--gt-a----a---t-
i Chinchilla_lanigera.JH721867.1                        I 14 C 0
s Chiropotes_israelita.k141_1189915                         70955 31 +    196370 C-T-T-ATAAGCAG----AT--------AA-G-TCAC-T-G---------A--A--A--GT-A----T---GG
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          15135 31 +     40510 C-T-T-ATAAGCAG----AT--------AA-G-TCAC-T-G---------A--A--A--GT-A----T---GG
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15138880 31 -  15256731 C-T-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      33927 31 -     53260 C-T-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101144491 31 + 101219884 c-t-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--a--a--gt-a----t---gg
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                16221 30 -     21363 C-C-T-ATAAGCAA----AT--------AT-C-TGCC-A-A---------A--A--G--GT-A----A---G-
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           761528 30 +    964067 C-C-T-ATAAGCAA----AT--------AT-C-TGCC-A-A---------a--a--g--gt-a----a---g-
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_3549804              146 23 -       354 C-C-T-ATAAGCAA----AT--------AC-C-CGAC-A-A---------A----------------------
i Chrysochloris_asiatica.ChrAsi_scaffold_3549804        C 0 I 5
s Colobus_angolensis.KN985967.1                          10886258 31 +  10971483 c-t-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--a--a--gt-a----t---gg
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147664422 31 + 156195979 C-T-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            16407 31 +     23629 C-T-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60613341 17 +  78930452 A-TCT-ACATATAA----AT--------A-tc-----------------------------------------
i Condylura_cristata.JH655880.1                         C 0 I 13
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         39435 33 -     40477 C-C-T-ATATGCAA----AT--------AA-C-TGAT-A-A---------A--A--A--GT-AACA-T---T-
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     I 1 I 1
s Cricetomys_gambianus.CriGam_scaffold_949                 278299 30 -    399297 C-T-T-GTGAGTAG----TT--------AG-C-TTTC-A-G---------T--A--A--GT-A----A---G-
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53028982 30 +  72327488 C-T-T-GTGAATAG----TT--------AG-C-TTGC-A-G---------T--A--A--GT-A----A---G-
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_88140              1915 15 +     11655 -------------------------------C-CCAC-A-A---------A--A--A--TT-A----A---A-
i Crocidura_indochinensis.CroInd_scaffold_88140         I 12 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            51756 30 -     70449 C-T-T-ATAAGCAA----AT--------AT-C-TCAA-A-T---------A--A--A--GT-A----A---A-
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 1 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  207892 30 -    956709 C-C-T-ACAAGCAG----AT--------AG-T-TTAC-A-A---------A--A--A--GT-A----A---G-
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 30474 29 -     67205 T-C-T-CTGAGAAG-----T--------AG-C-TCAC-A-A---------A--C--T--GA-A----C---C-
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                17514 30 +     26546 T-C-T-ATGAGCAG-----TT-------AG-T-TCAC-A-A---------A--A--A--GT-A----A---G-
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             58605 30 -    236241 T-C-T-ATGAGCAG-----GT-------AG-T-TCAC-A-A---------A--A--A--GT-A----A---T-
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          183412 30 -   6883506 C-C-T-ATAAGTGG----CT--------TT-T-TCTC-A-A---------A--A--A--GT-A----A---G-
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16844657 30 +  31942871 C-T-T-ATAAGCAG----AT--------AG-C-TCAC-A-A---------A--A--A--GT-A----A---G-
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80036554 30 -  96802777 C-C-T-ATAAGCAA----AT--------AT-C-TCAC-A-A---------A--A--A--GT-A----A---A-
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18698530 33 -  18957592 C-C-T-ATAAGCAA----GT--------AT-C-Tcac-a-a---------a--a--a--ct-a-attt---t-
i Desmodus_rotundus.KZ672188.1                          I 1 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 322260 29 +    993696 C-C-T-CTAATCAA----AT--------At-c-tcac-a-a---------a--a--a--gt-a----a-----
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   2913 29 +    151128 C-C-T-CTAATCAA----AT--------AT-C-TCAC-A-A---------A--A--A--GT-A----A-----
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   156765 16 +    228994 -----------------------------G-A-TCAC-A-A---------A--A--A--GT-A----A---G-
i Dinomys_branickii.DinBra_scaffold_1996                I 10 C 0
s Dipodomys_ordii.KN672545.1                              3656081 17 +   4240102 -------------------T--------AG-C-TCA--A-A---------G--A--A--GT-A----A---A-
i Dipodomys_ordii.KN672545.1                            I 3 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 27714 17 +     28912 -------------------T--------AG-C-TCA--A-A---------G--A--A--GT-A----A---A-
i Dipodomys_stephensi.DipSte_scaffold_44365             I 3 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                35855 30 -     73477 T-C-T-TTGAGCAG-----TT-------AC-T-TCAC-A-A---------A--A--A--GT-A----A---T-
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22998267 30 -  44670279 C-C-T-AGAAGCAA----AT--------AG-C-TGAC-A-A---------A--A--A--GT-A----A---G-
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 11962 35 +     24177 C-C-A-ATAACCAA----AT--------AT-c-tcac-a-a---------aaaa--a--gt-a-aaat---t-
i Eidolon_helvum.KE772537.1                             I 1 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1491200 30 +   1727528 C-C-T-ATAAGCAA----CT--------AT-C-tcac-a-a---------a--a--a--gt-a----a---a-
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7815676 32 +  15467074 C-C-T-ATATGCAA----AT--------GT-C-TGAC-A-A---------A--A--AATGT-A----A---G-
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        239529 30 -    369425 C-T-T-GTGAGTAG----TT--------AG-C-CTGC-A-G---------A--A--A--GC-A----T---G-
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           6642 30 -      7838 C-T-T-GTGAGTAG----TT--------AT-C-CTGC-A-G---------A--A--A--GC-A----T---G-
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85871920 30 +  99434291 C-C-T-ACAAGCAA----AT--------AT-C-tcca-a-a---------a--a--a--gt-a----a---t-
i Enhydra_lutris.KZ291749.1                             I 1 C 0
s Eptesicus_fuscus.JH977687.1                             4703923 19 +   6522550 ---------------------------------TCCC-A-A---------A--AAta--ct-a-aagt---t-
i Eptesicus_fuscus.JH977687.1                           I 17 C 0
s Equus_asinus.JREZ01000062.1                             5852712 29 -   7175178 C-C-T-CTAAGCAA----AT--------AC-C-TCAC-A-A---------A--G--A--GT-A----A-----
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13351215 29 +  41866177 C-C-T-CTAAGCAA----AT--------AC-C-TCAC-A-A---------A--G--A--GT-A----A-----
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          12705 29 +     92910 C-C-T-CTAAGCAA----AT--------AC-C-TCAC-A-A---------A--G--a--gt-a----a-----
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erythrocebus_patas.Contig8                             48771058 31 -  48907691 C-T-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          314770 30 +    330699 C-C-T-ATAAGCAA----AT--------AT-C-TCAC-A-A---------A--A--A--GT-A----A---A-
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             61222 30 +     89355 C-C-T-ATAAGCAA----AT--------AT-C-TCAC-A-A---------A--A--A--GT-A----A---A-
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              4852 30 +     13586 C-T-T-ATATGCAG----AT--------AT-C-TCAC-A-A---------A--A--T--GT-A----A---G-
i Eulemur_albifrons.k141_715837                         C 0 I 1
s Eulemur_collaris.k141_311830                               4785 30 -      6809 C-T-T-ACATGCAG----AT--------AT-C-TCAC-A-A---------A--A--T--GT-A----A---G-
i Eulemur_collaris.k141_311830                          C 0 I 1
s Eulemur_coronatus.k141_3240342                            11258 30 +     36558 C-T-T-ATATGCAG----AT--------AT-C-TCAC-A-A---------A--A--T--GT-A----A---G-
i Eulemur_coronatus.k141_3240342                        C 0 I 1
s Eulemur_flavifrons.k141_903901                             7580 30 +     60246 C-T-T-ATATGCAG----AT--------AT-C-TCAC-A-A---------A--A--T--GT-A----A---G-
i Eulemur_flavifrons.k141_903901                        C 0 I 1
s Eulemur_fulvus.k141_653297                                11058 30 +    109717 C-T-T-ACATGCAG----AT--------AT-C-TCAC-A-A---------A--A--T--GT-A----A---G-
i Eulemur_fulvus.k141_653297                            C 0 I 7
s Eulemur_macaco.k141_1341545                               15442 30 +     16540 C-T-T-ATATGCAG----AT--------AT-C-TCAC-A-A---------A--A--T--GT-A----A---G-
i Eulemur_macaco.k141_1341545                           C 0 I 1
s Eulemur_mongoz.k141_825972                                15716 30 +     27497 C-T-T-ATATGCAG----AT--------AT-C-TCAC-A-A---------A--A--T--GT-A----A---G-
i Eulemur_mongoz.k141_825972                            C 0 I 1
s Eulemur_rubriventer.k141_411740                           18172 30 +     26808 C-T-T-ATATGCAG----AT--------AT-C-TCAC-A-A---------A--A--T--GT-A----A---A-
i Eulemur_rubriventer.k141_411740                       C 0 I 1
s Eulemur_rufus.k141_1620292                                32909 30 +     46535 C-T-T-ATATGCAG----AT--------AT-C-TCAC-A-A---------A--A--T--GT-A----A---G-
i Eulemur_rufus.k141_1620292                            C 0 I 1
s Eulemur_sanfordi.k141_186399                              15630 30 -     29447 C-T-T-ATATGCAG----AT--------AT-C-TCAC-A-A---------A--A--T--GT-A----A---G-
i Eulemur_sanfordi.k141_186399                          C 0 I 1
s Felis_catus.CM001386.2                                129892681 30 - 159252932 C-T-T-ATAAGCAA----AT--------At-c-tcaa-a-t---------a--a--a--gt-a----a---a-
i Felis_catus.CM001386.2                                I 2 C 0
s Felis_catus_fca126.CM031420.1                         129279768 30 - 158578461 C-T-T-ATAAGCAA----AT--------At-c-tcaa-a-t---------a--a--a--gt-a----a---a-
i Felis_catus_fca126.CM031420.1                         I 2 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 20913 30 +     52776 C-T-T-ATAAGCAA----AT--------AT-C-TCAA-A-T---------A--A--A--GT-A----A---A-
i Felis_nigripes.FelNig_flattened_line_8080             I 2 C 0
s Galago_moholi.ctg555                                     210684 30 -    847004 C-T-T-ATAAGCAG----CT--------AT-C-TCCC-A-A---------A--A--A--AT-A----A---G-
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           13059 30 -     43889 C-T-T-ATAAGCAG----CT--------AT-C-TCCC-A-A---------A--A--A--AT-A----A---G-
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          10131 30 +     27357 C-T-T-ATAAGCAG----CT--------AT-C-TCCC-A-A---------A--A--A--GT-A----A---G-
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               156034 30 +    324696 C-T-T-ACAAGCAG----GT--------AT-C-TTAG-A-A---------A--A--A--GT-A----A---A-
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    181001 30 -    189561 C-C-T-ATAAGCAA----AT--------AT-c-tcac-a-a---------a--a--a--gt-a----a---a-
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           12829 30 -     18683 C-T-T-AAAAGATG----AT--------AG-A-TCAC-A-A---------A--A--A--GT-A----A---G-
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               5120 31 -     14630 C-T-T-ATAAGCAG----AT--------AG-C-TCAC-A-A---------A--A--A--GT-A----C---GG
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119652219 31 - 195582420 c-t-t-ataaGCAG----AT--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   77374 30 +    118900 C-T-T-ACAAGATG----AC--------TT-A-TCAC-A-A---------A--A--A--GT-T----A---A-
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         1629 30 +     10286 C-T-T-ATATGCAG----AT--------AT-C-TCAC-A-A---------A--A--T--GT-A----A---G-
i Hapalemur_alaotrensis.k141_1280836                    C 0 I 1
s Hapalemur_gilberti.k141_279011                              106 30 -     11661 C-T-T-ATATGCAG----AT--------AT-C-TCAC-A-A---------A--A--T--GT-A----A---G-
i Hapalemur_gilberti.k141_279011                        C 0 I 1
s Hapalemur_griseus.k141_1387522                             5435 30 +     56096 C-T-T-ATATGCAG----AT--------AT-C-TCAC-A-A---------A--A--T--GT-A----A---G-
i Hapalemur_griseus.k141_1387522                        C 0 I 1
s Hapalemur_meridionalis.k141_186231                        28685 30 -     42470 C-T-T-ATATGCAG----AT--------AT-C-TCAC-A-A---------A--A--T--GT-A----A---G-
i Hapalemur_meridionalis.k141_186231                    C 0 I 1
s Hapalemur_occidentalis.k141_797938                        45308 30 -     54384 C-T-T-ATATGCAG----AT--------AT-C-TCAC-A-A---------A--A--T--GT-A----A---G-
i Hapalemur_occidentalis.k141_797938                    C 0 I 1
s Helogale_parvula.HelPar_flattened_line_22962              16963 30 +     53719 C-T-T-ATAAGCAA----AT--------AT-C-TCAA-A-T---------A--A--A--GT-A----A---A-
i Helogale_parvula.HelPar_flattened_line_22962          I 1 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                27194 30 -     91191 C-C-T-ATAAGCAA----AT--------AT-C-TCAC-A-A---------A--A--T--GT-A----A---A-
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2550836 30 +  31725842 C-C-T-ATGAGCAG-----TT-------AG-C-TCAC-A-A---------A--A--A--GT-A----A---G-
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               60387 33 +     73687 T-A-T-ATAAGAAA----AT--------CT-C-TCAT-A-A---------A--A--A--GT-A----AGAAG-
i Heterohyrax_brucei.HetBruBak_scaffold_25354           I 2 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              146849 30 +    277961 C-C-T-ATAAGCAA----AT--------AT-C-TCAC-A-A---------G--A--A--GT-A----A---A-
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      278131 33 -    477199 C-C-T-ATAAGCAA----AT--------AT-c-tcat-t-a---------a--a--a--gt-a-aaat---t-
i Hipposideros_armiger.JXIK01001085.1                   I 1 I 1
s Hipposideros_galeritus.HipGal_scaffold_104691              7276 33 -      9143 C-C-T-ATAAGCAA----AT--------AT-C-TCAT-T-A---------A--A--A--GT-AAA-TT---T-
i Hipposideros_galeritus.HipGal_scaffold_104691         I 1 I 1
s Hoolock_leuconedys.ctg79                                      4527 31 -   7690867 C-T-T-ATAAGCAG----AT--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 17034 29 -     67322 C-T-T-ATAAGCA-----AT--------AT-C-TCAA-A-T---------A--A--A--GT-A----A---A-
i Hyaena_hyaena.HyaHya_flattened_line_20729             I 1 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           18717 30 -    119109 T-C-T-TTGAGCAG-----TT-------AG-T-TCAC-A-A---------A--A--A--GT-A----A---T-
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              4950 31 +      5897 C-T-T-ACAAGCAG----AT--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_624065                               1816 31 +      2112 C-T-T-ACAAGCAG----AT--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Hylobates_agilis.k141_624065                          C 0 C 0
s Hylobates_klossii.k141_466549                             11391 31 +     11537 C-T-T-ATAAGCAG----AT--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Hylobates_klossii.k141_466549                         C 0 N 0
s Hylobates_pileatus_b.ContigUN                                 14624497 31 -  25970782 C-T-T-ATAAGCAG----AT--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            1752 31 -      2977 C-T-T-ATAAGCAG----AT--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     5892 26 +     22540 C-C-T-ATGAGCGGTTC-AT--------AG-G-TTTT-A-A---------A----------------------
i Hystrix_cristata.HysCri_scaffold_50788                C 0 I 5
s Ictidomys_tridecemlineatus.JH393315.1                   7125608 30 +  13083262 C-T-T-ATAAGAAA----AC--------AG-C-TCAC-A-A---------A--A--a--gt-a----a---g-
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_4418183                                   1278 30 -      1457 C-T-T-ATATGCAG----AT--------AT-C-TCAC-A-A---------A--A--A--GT-A----A---G-
i Indri_indri.k141_4418183                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               8759 30 +     17520 C-C-T-ATAAGCAA----AT--------AT-C-TCAC-A-A---------A--A--A--GT-A----A---A-
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8565648 21 +  11848649 c-T-T-ATAAGTAG----TT--------AG-C-Ttga-a----------------------------------
i Jaculus_jaculus.JH725517.1                            C 0 I 7
s Kogia_breviceps.KogBre_flattened_line_35920               23377 30 +     37189 C-C-T-ATAAGCAA----AT--------AT-C-TCAC-A-A---------A--A--A--GT-A----A---A-
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          49984 31 -    147782 C-T-T-ATAAGCAG----GT--------AT-G-TCAC-T-A---------A--A--A--GT-A----T---GG
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   114014 18 -    115756 ---------------------------------TCAC-A-A---------A--A-TA--CT-AAA-GT---G-
i Lasiurus_borealis.LasBor_scaffold_5102                I 17 C 0
s Lemur_catta.scaffold_1                                258406990 30 - 285822530 C-T-T-ATATGCAG----AT--------AT-C-TCAC-A-A---------A--A--T--GT-A----A---G-
i Lemur_catta.scaffold_1                                C 0 I 1
s Lepilemur_ankaranensis.k141_884009                        23741 30 +     39228 C-T-T-ATATGCAG----AT--------AT-C-TCAC-A-A---------A--A--A--GT-A----A---G-
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            53125 30 +     63517 C-T-T-ATATGCAG----AT--------AT-C-TCAC-A-A---------A--A--A--GT-A----A---G-
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        78384 30 +    116806 C-T-T-ATATGCAG----AT--------AT-C-TCAC-A-A---------A--A--A--GT-A----A---G-
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     31380 30 -     33031 C-T-T-ATATGCAG----AT--------AT-C-TCAC-A-A---------A--A--A--GT-A----A---G-
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3085726 30 -   3498232 C-C-T-ATAAGCAA----GT--------AT-C-tcca-a-a---------a--a--a--gt-a----a---t-
i Leptonychotes_weddellii.KB714749.1                    I 1 C 0
s Lepus_americanus.LepAme_scaffold_62849                    13008 13 +     22452 T-T-T-ATAAGCAG----AT-----------------------------------------------------
i Lepus_americanus.LepAme_scaffold_62849                C 0 I 15
s Lipotes_vexillifer.KE558548.1                            135715 30 +   3060487 C-C-T-ATAAGCAA----AT--------AT-C-TCAC-A-A---------A--A--A--GT-A----A---A-
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19248125 31 +  19376315 C-T-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           10444 24 +     84689 C-T-T-ATAAGCAG----AT--------AT-C-TCCC-A-A---------A--A-------------------
i Loris_lydekkerianus.k141_550999                       C 0 I 5
s Loris_tardigradus.ctg97                                 3778194 24 +   6799190 C-T-T-ATAAGCAG----AT--------AT-C-TCCC-A-A---------A--A-------------------
i Loris_tardigradus.ctg97                               C 0 I 5
s Loxodonta_africana.GL010040.1                          20593971 30 -  62548349 C-C-T-GTAAGCAA----AT--------AT-C-TCAC-A-A---------A--a--a--gt-a----a---g-
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11087873 30 +  39895028 C-C-T-ATAAGCAA----AT--------AT-g-tcca-a-a---------a--a--a--gt-a----a---a-
i Lycaon_pictus.CM007556.1                              I 1 C 0
s Macaca_arctoides.k141_2201161                             19867 31 +     74745 C-T-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12706323 31 +  12821369 C-T-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                1968 31 -      3136 C-T-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           46785 31 +     63263 C-T-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                 1488 31 -      2568 C-T-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 2074 31 -      7381 C-T-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  45292 31 -     79256 C-T-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196035400 31 + 196197964 c-t-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---Gg
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11445568 31 +  11645122 c-t-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--a--a--gt-a----t---gg
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   4239 31 -     46448 C-T-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                1911 31 -     13212 C-T-T-ACAAGCAG----AG--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 15592 31 -     55006 C-T-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43840709 31 +  43892939 C-T-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               16878 31 -     24607 C-T-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               4244 31 -     27140 C-T-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                701335 35 +    802869 T-C-A-ATAACTAA----AT--------AT-C-TCAC-A-A---------AAAA--A--GT-AAAA-T---T-
i Macroglossus_sobrinus.MacSob_scaffold_879             I 1 C 0
s Mandrillus_leucophaeus.scaffold125                     43437286 31 -  43563597 C-T-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--A--A--GT-A----C---GG
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4450112 31 -   4543643 C-T-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            145365 29 +    252755 T-G-T-ATTAGCAA----AT--------AT-C-tcac-a-a---------a--a--a--gt-a----a-----
i Manis_javanica.JSZB01003966.1                         I 1 C 0
s Manis_pentadactyla.KN017078.1                             35442 29 +     58827 T-G-T-ATTAGCAA----AT--------AT-C-tcac-a-a---------a--a--a--gt-a----a-----
i Manis_pentadactyla.KN017078.1                         I 1 C 0
s Marmota_marmota.CZRN01000005.1                         36873448 30 +  64221397 C-T-T-ATAAGAAA----AC--------AG-C-TCAC-A-A---------A--A--a--gt-a----a---g-
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       64153 34 -    234502 C-C-C-ATAAACAA----AT--------AT-C-TTCT-A-A---------A--A--A--GT-AAAAAT---T-
i Megaderma_lyra.MegLyr_scaffold_3562                   I 1 I 1
s Mellivora_capensis.MelCap_flattened_line_15433              729 30 -     87323 C-C-T-ACAAGCAA----AT--------AT-C-TCCA-A-G---------A--A--A--GT-A----A---T-
i Mellivora_capensis.MelCap_flattened_line_15433        I 1 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               12485 39 +     15977 C-T-T-GTAAGTAG----TT--------AG-C-TTGC-A-GTAATTACAGT--A--A--GT-A----A---G-
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1046691 30 -  26018355 C-T-T-GTGAGTAG----TT--------AG-C-TTTC-A-G---------T--A--A--GT-A----A---A-
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_227248                     49 30 -      1377 C-C-T-ATAAGCAA----AT--------AT-C-TCAC-A-A---------A--A--A--GT-A----A---A-
i Mesoplodon_bidens.MesBid_scaffold_227248              C 0 C 0
s Microcebus_murinus.CM007691.1                          16510013 28 +  47401472 c-t-t-atatGCAG----AT--------AT-C-TCAC-A-A---------A--A--A--GT-A----------
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  34244 30 -     48017 C-T-C-AGAAGCAA----AT--------AT-C-TGAC-A-A---------A--A--A--GT-A----A---G-
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               22439 29 -     32043 C-C-T-ATA----A----GT--------AT-C-TCAC-A-A---------A--A--A--CT-AA-TTT---T-
i Micronycteris_hirsuta.MicHir_scaffold_37978           I 1 I 2
s Microtus_ochrogaster.CM001673.1                        22819828 30 -  98408828 C-T-T-GTGAGTAG----TT--------AT-C-CTGC-A-G---------A--A--A--GC-A----T---G-
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8209447 17 +  10048721 ---------------------------------tcac-a-a---------a--a--a--ct-a-aaat---t-
i Miniopterus_natalensis.LDJU01000022.1                 I 17 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            34101 17 +     45743 ---------------------------------TCAC-A-A---------A--A--A--CT-AAAA-T---T-
i Miniopterus_schreibersii.MinSch_scaffold_24116        I 17 C 0
s Miopithecus_ogouensis.k141_2935907                         1839 31 +     29742 C-T-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        11239 30 -    104932 C-C-T-ATAAGCAA----GT--------AT-C-TCCA-A-A---------A--A--A--GT-A----A---T-
i Mirounga_angustirostris.MirAng_flattened_line_8852    I 1 C 0
s Mirza_zaza.k141_226143                                     5399 28 +      8497 C-T-T-ATATGCAG----AT--------AT-C-TCAC-A-A---------A--A--A--GT-A----------
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 146144 30 +    154973 C-C-T-ATAAGCAA----AT--------AT-C-TCAC-A-A---------A--A--A--GT-A----A---A-
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                160960 32 +    265003 C-C-T-ATAAGCAA----AT--------AT-C-CCAC-A-A---------A--A--A--CT-AA--TT---T-
i Mormoops_blainvillei.MorMeg_scaffold_2952             I 1 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  1224 30 -     19904 C-C-T-ATAAGCAA----AT--------AT-C-TCAC-A-A---------A--A--A--GT-A----A---A-
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  144658 30 -    168139 C-T-T-ATAAGCAA----AT--------AT-C-TCAA-A-T---------A--A--A--GT-A----A---A-
i Mungos_mungo.MunMun_flattened_line_8729               I 1 C 0
s Murina_feae.MurFea_scaffold_2254                          19295 18 -    100666 ---------------------------------TCAC-A-A---------A--A-TA--CT-AAA-GT---T-
i Murina_feae.MurFea_scaffold_2254                      I 18 C 0
s Mus_caroli.LT608236.1                                  70766342 16 +  92629107 -----------------------------G-C-TTGC-T-G---------t--a--a--gt-a----a---g-
i Mus_caroli.LT608236.1                                 I 10 C 0
s Mus_musculus.chr16                                     75489401 16 +  98207768 -----------------------------G-C-TTGC-T-G---------T--a--a--gt-a----a---g-
i Mus_musculus.chr16                                    I 10 C 0
s Mus_pahari.LT608305.1                                  67555629 16 +  89017189 -----------------------------G-C-TTGC-T-G---------T--a--a--gt-a----a---g-
i Mus_pahari.LT608305.1                                 I 10 C 0
s Mus_spretus.CM004110.1                                 74330579 16 +  97876770 -----------------------------G-C-TTGC-T-g---------t--a--a--gt-a----a---g-
i Mus_spretus.CM004110.1                                I 10 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             11617 14 +     98495 ---------------------------------TTAC-A-A---------A--A--A--GT-A----A---G-
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 9 C 0
s Mustela_putorius.JH417978.1                             4424099 30 -  28371801 C-C-T-ACAAGCAA----AT--------AG-c-tcca-a-a---------a--a--a--gt-a----a---a-
i Mustela_putorius.JH417978.1                           I 1 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     89754 29 -    117718 T-C-T-CTGATAAG-----T--------AA-C-TCAC-A-A---------A--A--T--GT-A----A---T-
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               967605 18 +   8389877 ---------------------------------TCAC-A-A---------A--A-aa--ct-t-aagt---t-
i Myotis_brandtii.KE161952.1                            I 17 C 0
s Myotis_davidii.KB114863.1                               5019282 18 +   6462685 ---------------------------------TCAC-A-A---------A--AA-a--ct-t-aagt---t-
i Myotis_davidii.KB114863.1                             I 17 C 0
s Myotis_lucifugus.GL429887.1                             3465186 19 -   3747815 ---------------------------------TCAC-A-A---------A-AAA-A--Ct-t-aagt---t-
i Myotis_lucifugus.GL429887.1                           I 17 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        10400 18 +     66751 ---------------------------------TCAC-A-A---------A--AA-A--CT-TAA-GT---T-
i Myotis_myotis.MyoMyo_scaffold_6123                    I 17 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             4787 23 -      8794 C-C-T-ATACGCAA----AT--------AT-C-TGTC-A-G---------A----------------------
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 I 6
s Nannospalax_galili.KL201303.1                            118436 30 +    362372 C-T-T-ACAAGTAG----AT--------AG-C-TTGT-A-A---------T--A--A--GT-A----A---G-
i Nannospalax_galili.KL201303.1                         I 23 C 0
s Nasalis_larvatus.k141_153429                               8340 31 +     48152 C-T-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4484631 30 -  14209539 C-C-T-ATAAGCAA----GT--------AT-C-tcca-a-a---------a--a--a--gt-a----a---t-
i Neomonachus_schauinslandi.NINY01007774.1              I 1 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3950756 30 -   4490290 C-C-T-ATAAGCAA----AT--------AT-C-TCAC-A-A---------A--A--A--GT-A----A---A-
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  49051 33 +     94413 C-C-T-ATAAGCAA----AT--------AT-C-TCAT-A-A---------A--A--A--CT-A-TTTT---T-
i Noctilio_leporinus.NocLep_scaffold_12062              I 1 C 0
s Nomascus_annamensis.k141_220265                             262 31 +      1763 C-T-T-ATAAGCAG----AT--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Nomascus_annamensis.k141_220265                       C 0 C 0
s Nomascus_concolor.k141_226614                              1055 31 -      5092 C-T-T-ATAAGCAG----AT--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_39679                               23 31 -     17937 C-T-T-ATAAGCAG----AT--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Nomascus_gabriellae.k141_39679                        n 196 C 0
s Nomascus_siki_b.tarseq_80                             24773 31 -  18771707 C-T-T-ATAAGCAG----AT--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  2476 31 +      4512 C-T-T-ATAAGCAG----AT--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                30674 30 +   3668941 C-C-T-ATAAGCAA----AT--------AT-G-tcca-a-a---------a--a--a--gt-a----a---a-
i Nyctereutes_procyonoides.CAJHUB010000786.1            I 1 C 0
s Nycticebus_bengalensis.LG16                            65566869 24 -  95554990 C-T-T-ATAAGCAG----AT--------AT-C-TCCC-A-C---------A--A-------------------
i Nycticebus_bengalensis.LG16                           C 0 I 5
s Nycticebus_coucang.k141_2051882                            3598 24 +      6470 C-T-T-ATAAGCAG----AT--------AT-C-TCCC-A-C---------A--A-------------------
i Nycticebus_coucang.k141_2051882                       C 0 I 5
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65669203 24 +  89412551 C-T-T-ATAAGCAG----AT--------AT-C-TCCC-A-A---------A--A-------------------
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 I 5
s Ochotona_princeps.JH802095.1                            4995763 21 -  23139505 C-T-T-TTAGGCAG----AT--------AT-C-TCAC-A----------------------------------
i Ochotona_princeps.JH802095.1                          I 7 I 6
s Octodon_degus.JH651621.1                                3685310 29 +  10294119 t-c-t-ctGAGAAG-----T--------AG-C-TCAC-A-A---------A--A--T--AA-A----T---C-
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             679296 30 -   3126709 C-C-T-ATAAGCAA----AT--------AT-C-tcca-a-a---------a--a--a--gt-a----a---t-
i Odobenus_rosmarus.KB229369.1                          I 1 C 0
s Odocoileus_virginianus.KZ101650.1                       1079431 30 +   1425656 C-C-T-ATAAGCAA----AT--------AT-c-tcac-a-a---------a--a--a--gt-a----a---a-
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         36728 30 +     78940 C-C-T-ATAAGCAA----AT--------AT-C-tcac-a-a---------a--a--a--gt-a----a---a-
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  125081 30 +    145789 C-T-T-GTGAGTAG----TT--------AT-C-CTGC-A-G---------A--A--A--GC-A----T---G-
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  36881 30 +     62360 G-T-T-GTGAGTAG----TT--------AG-C-TTGC-A-G---------T--A--A--GT-A----A---G-
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7224441 30 -   7562323 C-C-T-ATAAGCAA----AT--------AT-C-TCAC-A-A---------A--A--A--GT-A----A---A-
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              57285 30 -     66828 C-C-T-ATAAGCAA----AT--------GT-C-AGAC-A-A---------A--A--G--GA-A----A---G-
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141876055 14 + 163896628 -------------------------------A-Tcac-a-a---------a--a--a--gt-a----a-----
i Oryctolagus_cuniculus.CM000803.1                      I 22 I 1
s Otocyon_megalotis.JAEUCK010005121.1                      307960 30 -    505867 C-C-T-ATAAGCAA----AT--------At-g-tcca-a-a---------a--a--a--gt-a----a---a-
i Otocyon_megalotis.JAEUCK010005121.1                   I 1 C 0
s Otolemur_crassicaudatus.k141_505435                         500 30 -     53940 C-T-T-ATAAGCAG----CT--------AT-C-TCCC-A-A---------A--A--A--GT-A----A---G-
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18008471 30 -  38779656 c-t-t-ataaGCAG----CT--------AT-C-TCCc-a-a---------a--a--a--gt-a----a---g-
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134076989 30 - 275406953 C-C-T-ATAAGCAG----AT--------AT-C-tcac-a-a---------a--a--t--gt-a----a---a-
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      78203 30 +    140051 C-C-T-ATAAGCAA----AT--------AT-C-TCAC-A-A---------A--A--T--GT-A----A---A-
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127574485 32 - 205426864 c-t-t-ataaacAG----AT--------AG-C-TCAC-A-A---------A--A--A--GT-A----TG--GG
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120151638 32 - 196562556 c-t-t-ataaaCAG----AT--------AG-C-TCAC-A-A---------A--A--a--gt-a----t--ggg
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  34074 30 +    295523 C-T-T-ATAAGCAA----AT--------AT-C-TCAA-A-T---------A--A--A--GT-A----A---A-
i Panthera_onca.PanOnc_flattened_line_1615              I 1 C 0
s Panthera_pardus.KV860323.1                              3637810 30 +  18214204 C-T-T-ATAAGCAA----AT--------At-c-tcaa-a-t---------a--a--a--gt-a----a---a-
i Panthera_pardus.KV860323.1                            I 1 C 0
s Panthera_tigris.KE721879.1                              5027483 30 -   6340057 C-T-T-ATAAGCAA----AT--------At-c-tcaa-a-t---------a--a--a--gt-a----a---a-
i Panthera_tigris.KE721879.1                            I 1 C 0
s Pantholops_hodgsonii.KE114631.1                         1065849 30 -   1292953 C-C-T-ATAAGCAA----AT--------AT-c-tcat-a-a---------a--a--t--gt-a----a---a-
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188156074 31 - 188283584 c-t-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--a--a--gt-a----t---gg
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             4390 31 +      5367 C-T-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47513459 31 +  47705337 C-T-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 67438 31 -    104429 C-T-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    5971 31 +     14967 C-T-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 1831 31 -      7628 C-T-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    115535 30 -    135482 C-T-T-ATAGGCAA----AT--------AT-C-TCAA-A-T---------A--A--A--GT-A----A---A-
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 I 1 C 0
s Perodicticus_ibeanus.k141_117958                           5192 30 -     23713 C-T-T-ATAAGCAG----AT--------AT-C-TCCC-C-A---------A--A--A--GT-A----A---A-
i Perodicticus_ibeanus.k141_117958                      C 0 I 1
s Perodicticus_potto.k141_713187                            24504 30 -     27972 C-T-T-ATAAGCAG----AT--------AT-C-TCCC-C-A---------A--A--A--GT-A----A---A-
i Perodicticus_potto.k141_713187                        C 0 I 1
s Perognathus_longimembris.PerPac_flattened_line_22291      44330 23 -     45160 C-T-T-A------G----AT--------AG-C-TCC--C-A---------G--A--A--GT-A----A---A-
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4950118 30 -   8017169 C-T-T-GTGAGTAG----TT--------AG-C-TTGC-A-G---------T--A--A--GA-A----A---G-
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    12225 30 -     36578 C-C-T-AGGAGCAG-----TT-------AT-C-TCAC-A-A---------A--A--A--GT-A----A---G-
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            121046 30 -    122454 C-C-T-ATAAGCAA----AT--------AT-C-TCAC-A-A---------A--A--A--GT-A----A---A-
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1987485                           1859 31 -      5908 C-T-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       2483 31 -     17985 C-T-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            1850 31 +      7694 C-T-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26740328 31 +  26888534 c-t-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--A--a--gt-a----t---gg
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            97223 19 +    112873 ---------------------------------TCAC-A-A---------A--ACTA--CT-AAA-GT---T-
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        I 17 C 0
s Pithecia_albicans.k141_991845                             43457 31 -     61926 C-T-T-ATAAGCAG----AT--------AA-G-TCAC-T-G---------A--A--A--GT-A----T---GG
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        24888 31 +     78826 C-T-T-ATAAGCAG----AT--------AA-G-TCAC-T-G---------A--A--A--GT-A----T---GG
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              8837 39 -     15800 C-T-T-ATGTATAA----ATTCTATCTCAA-A-AAAA-T-A---------A--A--A--AT-A----A---AA
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        12035 39 -     16101 C-T-T-ATGTATAA----ATTCTATCTCAA-A-AAAA-T-A---------A--A--A--AT-A----A---AA
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          5344 31 +      9673 C-T-T-ATAAGCAG----AT--------AA-G-TCAC-T-G---------A--A--A--GT-A----T---GG
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13474340 31 -  19735023 C-T-T-ATAAGCAG----AT--------AA-G-TCAC-T-G---------A--A--A--GT-A----T---GG
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           13246 31 -     31692 C-T-T-ATAAGCAG----AT--------AA-G-TCAC-T-G---------A--A--A--GT-A----T---GG
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           5133 30 +     21690 C-C-T-ATAAGCAA----AT--------AT-C-TCAC-A-A---------A--A--A--GT-A----A---A-
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       22686 31 +     44506 C-T-T-ATAAGCAG----AT--------AA-G-TCAC-T-G---------A--A--A--GT-A----T---GG
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        22899 31 +     67491 C-T-T-ATAAGCAG----AT--------AA-G-TCAC-T-G---------A--A--A--GT-A----T---GG
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      13138 31 -     98129 C-T-T-ATAAGCAG----AT--------AA-G-TCAC-T-G---------A--A--A--GT-A----T---GG
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     22738 31 +    147771 C-T-T-ATAAGCAG----AT--------AA-G-TCAC-T-G---------A--A--A--GT-A----T---GG
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        22993 31 -     23762 C-T-T-ATAAGCAG----AT--------AA-G-TCAC-T-G---------A--A--A--GT-A----T---GG
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          3459 31 -     55515 C-T-T-ATAAGCAG----AT--------AA-G-TCAC-T-G---------A--A--A--GT-A----T---GG
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         22812 31 +    152463 C-T-T-ATAAGCAG----AT--------AA-G-TCAC-T-G---------A--A--A--GT-A----T---GG
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                        529 31 -    119457 C-T-T-ATAAGCAG----AT--------AA-G-TCAC-A-G---------A--A--A--GT-A----T---GG
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         12534 31 +    134592 C-T-T-ATAAGCAG----AT--------AA-G-TCAC-T-G---------A--A--A--GT-A----T---GG
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          23122 31 -     75465 C-T-T-ATAAGCAG----AT--------AA-G-TCAC-T-G---------A--A--A--GT-A----T---GG
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              187008 31 -    373494 c-t-t-aTAAGCAG----AT--------AG-C-TCAA-A-A---------A--A--A--GT-A----T---GG
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19807656 31 +  19899266 C-T-T-ATAAGCAG----AT--------AG-C-TCAA-A-A---------A--A--A--GT-A----T---GG
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               5585 31 -     15069 C-T-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              5719 31 +     14865 C-T-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                1477 33 -      9567 T-A-T-ATAAGAAA----AT--------CT-C-TCAT-A-A---------A--A--A--GT-A----AGAAG-
i Procavia_capensis.ProCapCap_scaffold_149274           I 2 C 0
s Prolemur_simus.MPIZ01000048.1                           6848371 30 +  12164890 c-t-t-atatGCAG----AT--------AT-C-TCAC-A-A---------A--A--T--gt-a----a---g-
i Prolemur_simus.MPIZ01000048.1                         C 0 I 1
s Propithecus_coronatus.k141_1353159                         3429 30 +     11805 C-T-T-ATATGCAG----AT--------AT-C-TCAC-A-A---------A--A--A--GT-A----A---G-
i Propithecus_coronatus.k141_1353159                    C 0 I 7
s Propithecus_diadema.k141_577245                           42771 30 +     52369 C-T-T-ATATGCAG----AT--------AT-C-TCAC-A-A---------A--C--A--GT-A----A---G-
i Propithecus_diadema.k141_577245                       C 0 I 4
s Propithecus_edwardsi.k141_1317105                         35157 30 -     44753 C-T-T-ATATGCAG----AT--------AT-C-TCAC-A-A---------A--C--A--GT-A----A---G-
i Propithecus_edwardsi.k141_1317105                     C 0 I 4
s Propithecus_perrieri.k141_7554                            17081 31 +     27322 C-T-T-ATATGCAG----AT--------AT-C-TCAC-A-A---------A--A--A--GT-A----AG--G-
i Propithecus_perrieri.k141_7554                        C 0 I 4
s Propithecus_tattersalli.k141_907138                       16717 30 -     53241 C-T-T-ATATGCAG----AT--------AT-C-TCAC-A-A---------A--A--A--GT-A----A---G-
i Propithecus_tattersalli.k141_907138                   C 0 I 7
s Propithecus_verreauxi.k141_158021                         38982 30 -     48185 C-T-T-ATATGCAG----AT--------AT-T-TCAC-A-A---------A--A--A--GT-A----A---G-
i Propithecus_verreauxi.k141_158021                     C 0 I 7
s Psammomys_obesus.NESX01026517.1                           34020 30 +     77221 C-T-T-GTGAGTAG----TT--------AG-C-TTGC-A-g---------t--a--a--gt-a----a---g-
i Psammomys_obesus.NESX01026517.1                       I 5 C 0
s Pteronotus_parnellii.KE867983.1                            3604 33 -     27784 C-C-T-AGAAACAA----AT--------AT-C-TCAC-A-A---------A--C--a--ct-a-aatt---t-
i Pteronotus_parnellii.KE867983.1                       I 1 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        246408 30 -    344369 C-C-T-ACAAGCAA----GT--------AT-C-TCCA-A-A---------A--A--A--GT-A----A---A-
i Pteronura_brasiliensis.PteBra_flattened_line_1343     I 1 C 0
s Pteropus_alecto.KB031157.1                             13245715 36 -  17261082 C-C-A-ATAACTAA----AT--------AT-c-tcac-aca---------aaaa--a--gt-a-aaat---t-
i Pteropus_alecto.KB031157.1                            I 1 C 0
s Pteropus_vampyrus.KN525959.1                             603665 36 -   3946241 C-C-A-ATAACTAA----AT--------AT-c-tcac-aca---------aaaa--a--gt-a-aaat---t-
i Pteropus_vampyrus.KN525959.1                          I 1 C 0
s Puma_concolor.QAVW01000427.1                          131534061 30 - 161321710 C-T-T-ATAAGCAA----AT--------At-c-tcaa-a-t---------a--a--a--gt-a----a---a-
i Puma_concolor.QAVW01000427.1                          I 2 C 0
s Pygathrix_cinerea.k141_374971                             29703 31 +     56732 C-T-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Pygathrix_cinerea.k141_374971                         C 0 I 3
s Pygathrix_nigripes_b.ctg79                                 6806194 31 +   6970761 C-T-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Pygathrix_nigripes_b.ctg79                               C 0 I 2
s Pygathrix_nigripes_a.k141_101123                             5588 31 +     18040 C-T-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Pygathrix_nigripes_a.k141_101123                        C 0 I 2
s Rangifer_tarandus.RanTarSib_scaffold_24239                15508 30 +     68503 C-C-T-ATAAGCAA----AT--------AT-C-TCAC-A-A---------A--A--A--GT-A----A---A-
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13915336 10 +  90463843 T-T-T-GTGAGTA------------------------------------------------------------
i Rattus_norvegicus.chr11                               C 0 I 12
s Rhinolophus_sinicus.LVEH01000179.1                      1787552 33 +   2252614 C-C-T-ATAAGCAA----AT--------At-c-tcat-a-a---------a--a--a--gt-a-aaat---t-
i Rhinolophus_sinicus.LVEH01000179.1                    I 1 I 1
s Rhinopithecus_bieti.k119_1391695                           1816 31 -      1866 C-T-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Rhinopithecus_bieti.k119_1391695                      C 0 N 0
s Rhinopithecus_roxellana.NC_044549.1                   206377473 31 - 206558726 C-T-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--a--a--gt-a----t---gg
i Rhinopithecus_roxellana.NC_044549.1                   C 0 I 2
s Rhinopithecus_strykeri.ctg4                            44856373 31 -  45163003 C-T-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Rhinopithecus_strykeri.ctg4                           C 0 I 2
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                19041 35 +    109198 C-C-A-ATAACTAA----AT--------AT-C-TCAC-A-A---------AAAA--A--GT-AAAA-T---T-
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            I 1 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       7675 30 +     12214 C-C-T-ATAAGGAA----AT--------AT-C-TCAC-A-A---------A--A--A--GT-A----A---A-
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15672552 31 -  43202129 c-t-t-ataaGCAG----AT--------AT-G-TCAC-T-A---------A--A--A--GT-a----t---gg
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        4469 31 +     34089 C-T-T-ATAAGCAG----AT--------AT-G-TCAC-T-A---------A--A--A--GT-A----T---GG
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              4410 31 -     60842 C-T-T-ATAAGCAG----AT--------AT-G-TCAC-T-A---------A--A--A--GT-A----T---GG
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              4505 31 +     67014 C-T-T-ATAAGCAG----AT--------AT-G-TCAC-T-A---------A--A--A--GT-A----T---GG
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              4483 31 +     60816 C-T-T-ATAAGCAG----AT--------AT-G-TCAC-T-A---------A--A--A--GT-A----T---GG
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 4420 31 -     76454 C-T-T-ATAAGCAG----AT--------AT-G-TCAC-T-A---------A--A--A--GT-A----T---GG
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17341145 31 -  30362882 C-T-T-ATAAGCAG----AT--------AT-G-TCAC-T-A---------A--A--A--GT-A----T---GG
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         20504 31 -     62485 C-T-T-ATAAGCAG----AT--------AT-G-TCAC-T-A---------A--A--A--GT-A----T---GG
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   32029 17 -    114521 A-TCT-ACATATAA----AT--------A-TC-----------------------------------------
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 I 14
s Semnopithecus_entellus.k141_1572367                        3200 31 +     15331 C-T-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Semnopithecus_entellus.k141_1572367                   C 0 I 4
s Semnopithecus_hypoleucos.k141_761524                       8597 31 +     20762 C-T-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Semnopithecus_hypoleucos.k141_761524                  C 0 I 4
s Semnopithecus_johnii.k141_785014                         118599 31 +    130994 C-T-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Semnopithecus_johnii.k141_785014                      C 0 I 4
s Semnopithecus_priam.k141_410937                           37386 31 +     46263 C-T-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Semnopithecus_priam.k141_410937                       C 0 I 4
s Semnopithecus_schistaceus.k141_387461                     30500 31 +     42640 C-T-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Semnopithecus_schistaceus.k141_387461                 C 0 I 4
s Semnopithecus_vetulus.k141_1143185                        13544 31 +     30600 C-T-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Semnopithecus_vetulus.k141_1143185                    C 0 I 4
s Sigmodon_hispidus.SigHis_scaffold_11332                  100065 30 -    120886 C-T-T-GTGAGTTG----TT--------AG-T-TTGT-A-G---------T--A--A--GT-A----A---A-
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            18606 29 +    739146 A-C-T-ATAAGCAA----AT--------A--C-TCAG-A-A---------G--A--A--GT-A----T---A-
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2239524 30 +   2842873 C-T-T-ATAAGAAA----AC--------AG-C-TCAC-A-A---------A--A--T--Gt-a----a---g-
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             234528 30 -    276980 C-C-T-ATAAGCAA----AT--------AG-T-TCCC-A-A---------A--A--A--GT-A----A---A-
i Spilogale_gracilis.SpiGra_flattened_line_905          I 1 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            27320 30 +     62062 C-T-T-ATAAGCAA----AT--------AT-C-TCAA-A-T---------A--A--A--GT-A----A---A-
i Suricata_suricatta.SurSur_flattened_line_20339        I 1 C 0
s Sus_scrofa.CM000824.4                                 189271588 30 + 218635234 C-C-T-ATAAGTAA----AT-------GAT-C-Tcac-a-a---------a--a--a--gt-a----a-----
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_72                      3753717 31 -  60974793 C-T-T-ATAAGCAG----AT--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Symphalangus_syndactylus.tarseq_72                    n 31 n 31
s Tadarida_brasiliensis.TadBra_scaffold_61492                   3 17 +     20549 ---------------------------------TCAC-T-A---------A--A--A--CT-AAA-GT---T-
i Tadarida_brasiliensis.TadBra_scaffold_61492           n 259 I 203
s Tamandua_tetradactyla.TamTet_scaffold_26877               14450 23 +     45698 C-C-T-ATATGCAA----AT--------AT-C-TGCC-A-G---------A----------------------
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 I 6
s Tapirus_indicus.TapInd_scaffold_176                      806866 29 +   1148477 C-C-T-CTAAGCAA----AT--------AT-C-TCAC-A-A---------A--A--A--GT-A----A-----
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  57561 29 +     99546 C-C-T-CTAAGCAA----AT--------AT-C-TCAC-A-A---------A--A--A--GT-A----A-----
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               26283 30 +     42269 C-T-T-ATAAGCAG----AT--------AT-C-TCAT-A-C---------A--A--A--GT-A----A---G-
i Tarsius_lariang.k141_609102                           C 0 I 1
s Tarsius_wallacei.k141_48636                               59599 30 +     65473 C-T-T-ATAAGCAG----AT--------AT-C-TCGT-A-C---------A--A--A--GT-A----A---G-
i Tarsius_wallacei.k141_48636                           C 0 I 1
s Theropithecus_gelada.CM009951.1                       194007600 31 - 194193292 c-t-T-ATAAGCAG----AG--------AG-C-TCAC-A-G---------A--a--a--gt-a----t---gg
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  5281 30 +      6782 C-C-T-ATAAGCAA----CT--------TT-C-TCCC-A-A---------A--A--A--GT-A----A---G-
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  135596 33 -    259118 C-C-T-ATAAACAA----GT--------AT-C-TCAC-A-A---------A--A--A--CT-AA-TTT---T-
i Tonatia_saurophila.TonSau_scaffold_3334               I 1 C 0
s Trachypithecus_auratus.k141_738098                        26704 31 +     38948 C-T-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   20433 31 -     32910 C-T-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      1821 31 -     12939 C-T-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       1755 31 -     14244 C-T-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           43154 31 -     54611 C-T-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Trachypithecus_geei.k141_670367                       C 0 I 5
s Trachypithecus_germaini.k141_868450                         960 31 -     11566 C-T-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     3132 31 -     15592 C-T-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          1789 31 +     14371 C-T-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_283605                  51540 31 +     51589 C-T-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Trachypithecus_leucocephalus.k141_283605              C 0 n 0
s Trachypithecus_melamera.k141_238507                       14722 10 +     14732 C-T-T-ATAAGCA------------------------------------------------------------
i Trachypithecus_melamera.k141_238507                   C 0 N 0
s Trachypithecus_obscurus.k141_1115109                       5193 31 -     28054 C-T-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Trachypithecus_obscurus.k141_1115109                  C 0 I 6
s Trachypithecus_phayrei.ctg3                            44659993 30 -  44834318 C-T-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---G-
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       2297 31 +     13828 T-T-T-ATAAGCAG----AG--------AG-C-TCAC-A-A---------A--A--A--GT-A----T---GG
i Trachypithecus_pileatus.k141_1022309                  C 0 I 5
s Tragulus_javanicus.TraJav_scaffold_14717                   4900 32 +     90398 T-C-TTTTAAGAAA----AT--------AT-C-TCAC-GAA---------A--A--A--GT-A----A---A-
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16084627 30 +  31416278 C-C-T-ATAAGCAA----AT--------AT-C-TCAC-A-A---------A--a--a--gt-a----a---g-
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2792647 31 -   3938065 C-G-T-ATAAGCAG----AT--------AT-C-TCAC-g-a---------a--a--a--gtta----a---g-
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    4861 30 +     13056 C-A-T-ATAAGCAG----AT--------AT-C-TCAC-A-A---------A--A--A--GT-A----A---G-
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69313156 30 -  96451834 C-C-T-ATAAGCAA----AT--------AT-C-TCAC-A-A---------A--A--A--GT-A----A---A-
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   1059 34 +     10241 A-CCT-ATGTAGAA-AA-AA--------A-TCTCCAA-A-G---------A--A--A--GT-A----T---T-
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6514545 30 +  28682327 C-C-T-ATAACCAA----AT--------AT-C-tcca-a-a---------a--a--a--gt-a----a---a-
i Ursus_maritimus.KK498671.1                            I 1 C 0
s Varecia_rubra.k141_432109                                  5073 30 -     20643 C-T-T-ATATGCAG----AT--------AT-C-TCAC-A-A---------A--A--T--GT-A----A---G-
i Varecia_rubra.k141_432109                             C 0 I 1
s Varecia_variegata.k141_775891                             24614 30 -     33872 C-T-T-ATATGCAG----AT--------AT-C-TCAC-A-A---------A--A--T--GT-A----A---G-
i Varecia_variegata.k141_775891                         C 0 I 1
s Vicugna_pacos.KN269600.1                                1524401 30 -   2331223 C-C-T-ATAAGCAA----AT--------AT-c-ttac-a-a---------a--a--a--gt-t----a---a-
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                138052 30 -    281493 C-C-T-ATAAGCAA----AT--------AT-G-TCCA-A-A---------A--A--A--GT-A----A---A-
i Vulpes_lagopus.VulLag_flattened_line_2045             I 1 C 0
s Xerus_inauris.XerIna_scaffold_7898                       126632 30 -    134049 C-T-T-ATAAGAAG----AC--------AG-C-TCAC-A-A---------A--A--A--GT-A----A---G-
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        214022 30 -    227762 C-C-C-ATAAGCAA----AT--------AT-C-TCCA-A-A---------A--A--A--GT-A----A---T-
i Zalophus_californianus.ZalCal_flattened_line_4097     I 1 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     14742 20 -     20485 C-T-T-A-AAGTAG----TT--------AG-C-TTGA-A----------------------------------
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 I 8
s Ziphius_cavirostris.ZipCav_flattened_line_127025           6656 30 -      8775 C-C-T-ATAAGCAA----AT--------AT-C-TCAC-A-A---------A--A--A--GT-A----A---A-
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             38964  0 -     47444 C
e Sorex_araneus.JH798170.1                               17750754 3364 -  27805282 I
e Erinaceus_europaeus.JH835290.1                         11534163  4 +  16010500 I
e Hylobates_pileatus_a.tarseq_592                             33391 319 -     60944 I
e Propithecus_coquerelli.NW_012147997.1                    667273 6500 -   2312742 I
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               11633 1 +    209709 G
s Allenopithecus_nigroviridis.k141_2469532                   1124 1 -     60446 T
i Allenopithecus_nigroviridis.k141_2469532              C 0 I 2
s Allochrocebus_lhoesti.k141_3566948                         1846 1 -     29318 T
i Allochrocebus_lhoesti.k141_3566948                    C 0 I 3
s Allochrocebus_preussi.k141_1108977                          781 1 +     38766 G
i Allochrocebus_preussi.k141_1108977                    C 0 I 3
s Allochrocebus_solatus.k141_371672                          1740 1 -     80423 T
i Allochrocebus_solatus.k141_371672                     C 0 I 3
s Alouatta_belzebul.k141_1818029                            10037 1 -     18050 A
i Alouatta_belzebul.k141_1818029                        C 0 I 2
s Alouatta_caraya.k141_5460                                 11130 1 -     11521 A
i Alouatta_caraya.k141_5460                             C 0 I 2
s Alouatta_discolor.k141_811576                             10714 1 -     21359 A
i Alouatta_discolor.k141_811576                         C 0 I 2
s Alouatta_juara.k141_1244470                                 329 1 +      2129 A
i Alouatta_juara.k141_1244470                           C 0 I 2
s Alouatta_macconnelli.k141_1331706                         10013 1 -     10438 A
i Alouatta_macconnelli.k141_1331706                     C 0 I 2
s Alouatta_nigerrima.k141_2718643                            6669 1 +      7047 A
i Alouatta_nigerrima.k141_2718643                       C 0 I 2
s Alouatta_palliata.k141_1316127                             9949 1 +     10410 A
i Alouatta_palliata.k141_1316127                        C 0 I 1
s Alouatta_puruensis.k141_1284840                            3757 1 -      4927 A
i Alouatta_puruensis.k141_1284840                       C 0 I 2
s Aotus_azarae.k141_3170768                                 62397 1 +     78111 T
i Aotus_azarae.k141_3170768                             C 0 I 2
s Aotus_griseimembra.k141_3275623                            5340 1 +     22701 T
i Aotus_griseimembra.k141_3275623                       C 0 I 2
s Aotus_nancymaae.KZ196176.1                              5749296 1 +   9889416 t
i Aotus_nancymaae.KZ196176.1                            C 0 I 2
s Aotus_trivirgatus.k141_1740727                             5882 1 -    104377 A
i Aotus_trivirgatus.k141_1740727                        C 0 I 2
s Aotus_vociferans.k141_718647                               5884 1 +     23246 A
i Aotus_vociferans.k141_718647                          C 0 I 2
s Ateles_geoffroyi_b.tarseq_2582                             9539144 1 +  39197703 A
i Ateles_geoffroyi_b.tarseq_2582                           C 0 I 2
s Ateles_belzebuth.k141_1348307                             60417 1 +     85812 T
i Ateles_belzebuth.k141_1348307                         C 0 I 2
s Ateles_chamek.k141_1072810                                11429 1 +     89302 A
i Ateles_chamek.k141_1072810                            C 0 I 2
s Ateles_geoffroyi_a.k141_1300742                             15932 1 -     58268 A
i Ateles_geoffroyi_a.k141_1300742                         C 0 I 2
s Ateles_marginatus.k141_899112                             63925 1 +    119057 A
i Ateles_marginatus.k141_899112                         C 0 I 1
s Ateles_paniscus.k141_1631200                               5894 1 -     25888 A
i Ateles_paniscus.k141_1631200                          C 0 I 2
s Cacajao_ayresi.k141_724503                               113780 1 -    171031 A
i Cacajao_ayresi.k141_724503                            C 0 I 1
s Cacajao_calvus.k141_96166                                 12811 1 +    125063 A
i Cacajao_calvus.k141_96166                             C 0 I 1
s Cacajao_hosomi.k141_303789                                14853 1 -    216513 A
i Cacajao_hosomi.k141_303789                            C 0 I 1
s Cacajao_melanocephalus.k141_1160263                        7396 1 -    134917 A
i Cacajao_melanocephalus.k141_1160263                   C 0 I 1
s Cebus_albifrons.Contig22                               18890632 1 -  29618158 A
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 8176 1 -     26817 A
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                12416 1 +     25043 A
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cercocebus_atys.KQ010443.1                              6555069 1 +   6739814 g
i Cercocebus_atys.KQ010443.1                            C 0 I 2
s Cercocebus_chrysogaster.k141_2328246                      26546 1 +     60454 G
i Cercocebus_chrysogaster.k141_2328246                  C 0 I 2
s Cercocebus_lunulatus.k141_4634644                          1751 1 -     21101 G
i Cercocebus_lunulatus.k141_4634644                     C 0 I 2
s Cercocebus_torquatus.k141_3969582                         59061 1 -    107033 G
i Cercocebus_torquatus.k141_3969582                     C 0 I 2
s Cercopithecus_ascanius.k141_4123525                        1953 1 -     17608 T
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          29448 1 +     30494 T
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          58294 1 -     59240 G
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          1995 1 +     16677 G
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           24153 1 +     35983 T
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11990681 1 +  12117833 T
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46477439 1 +  46592721 T
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      40990 1 -     45581 T
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       1996 1 +     35577 T
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        1772 1 -     25661 T
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        1750 1 -     17744 T
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        21366 1 +     37128 T
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Cheracebus_lucifer.k141_619653                             5434 1 -     18223 A
i Cheracebus_lucifer.k141_619653                        C 0 I 2
s Cheracebus_lugens.k141_203936                             22455 1 +     25473 A
i Cheracebus_lugens.k141_203936                         C 0 I 2
s Cheracebus_regulus.k141_2128895                           41492 1 +     57117 A
i Cheracebus_regulus.k141_2128895                       C 0 I 2
s Cheracebus_torquatus.k141_315545                          46171 1 +     54541 A
i Cheracebus_torquatus.k141_315545                      C 0 I 2
s Chiropotes_israelita.k141_1189915                         70986 1 +    196370 A
i Chiropotes_israelita.k141_1189915                     C 0 I 1
s Chiropotes_sagulatus.k141_773804                          15166 1 +     40510 A
i Chiropotes_sagulatus.k141_773804                      C 0 I 1
s Chlorocebus_aethiops.ctg22                             15138911 1 -  15256731 T
i Chlorocebus_aethiops.ctg22                            C 0 I 6
s Chlorocebus_pygerythrus.k141_1486215                      33958 1 -     53260 T
i Chlorocebus_pygerythrus.k141_1486215                  C 0 I 7
s Chlorocebus_sabaeus.CM001963.2                        101144522 1 + 101219884 t
i Chlorocebus_sabaeus.CM001963.2                        C 0 I 3
s Colobus_angolensis.KN985967.1                          10886289 1 +  10971483 g
i Colobus_angolensis.KN985967.1                         C 0 I 7
s Colobus_guereza.LG08                                  147664453 1 + 156195979 G
i Colobus_guereza.LG08                                  C 0 I 9
s Colobus_polykomos.k141_1406057                            16438 1 +     23629 G
i Colobus_polykomos.k141_1406057                        C 0 I 9
s Erythrocebus_patas.Contig8                             48771089 1 -  48907691 T
i Erythrocebus_patas.Contig8                            C 0 I 3
s Gorilla_beringei.k141_111300                               5151 1 -     14630 G
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119652250 1 - 195582420 G
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Hoolock_leuconedys.ctg79                                      4558 1 -   7690867 G
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hylobates_abbotti.k141_493872                              4981 1 +      5897 G
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_624065                               1847 1 +      2112 G
i Hylobates_agilis.k141_624065                          C 0 C 0
s Hylobates_klossii.k141_285563                                26 1 +      1026 G
i Hylobates_klossii.k141_285563                         N 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14624528 1 -  25970782 G
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            1783 1 -      2977 G
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Lagothrix_lagothricha.k141_12968                          50015 1 -    147782 A
i Lagothrix_lagothricha.k141_12968                      C 0 I 2
s Lophocebus_aterrimus.ctg55                             19248156 1 +  19376315 T
i Lophocebus_aterrimus.ctg55                            C 0 I 4
s Macaca_arctoides.k141_2201161                             19898 1 +     74745 T
i Macaca_arctoides.k141_2201161                         C 0 I 3
s Macaca_assamensis.Contig65                             12706354 1 +  12821369 T
i Macaca_assamensis.Contig65                            C 0 I 1
s Macaca_cyclopis.k119_893486                                1999 1 -      3136 T
i Macaca_cyclopis.k119_893486                           C 0 I 3
s Macaca_fascicularis.k141_155037                           46816 1 +     63263 T
i Macaca_fascicularis.k141_155037                       C 0 I 3
s Macaca_fuscata.k119_599327                                 1519 1 -      2568 T
i Macaca_fuscata.k119_599327                            C 0 I 3
s Macaca_leonina.k141_467472                                 2105 1 -      7381 T
i Macaca_leonina.k141_467472                            C 0 I 4
s Macaca_maura.k141_251854                                  45323 1 -     79256 G
i Macaca_maura.k141_251854                              C 0 I 3
s Macaca_mulatta.NC_041755.1                            196035431 1 + 196197964 t
i Macaca_mulatta.NC_041755.1                            C 0 I 3
s Macaca_nemestrina.KQ004885.1                           11445599 1 +  11645122 t
i Macaca_nemestrina.KQ004885.1                          C 0 I 4
s Macaca_nigra.k141_282495                                   4270 1 -     46448 T
i Macaca_nigra.k141_282495                              C 0 I 3
s Macaca_radiata.k141_3680256                                1942 1 -     13212 T
i Macaca_radiata.k141_3680256                           C 0 I 3
s Macaca_siberu.k141_741907                                 15623 1 -     55006 T
i Macaca_siberu.k141_741907                             C 0 I 3
s Macaca_silenus.Contig12                                43840740 1 +  43892939 T
i Macaca_silenus.Contig12                               C 0 I 4
s Macaca_thibetana.k99_662710                               16909 1 -     24607 G
i Macaca_thibetana.k99_662710                           C 0 I 1
s Macaca_tonkeana.k141_2870633                               4275 1 -     27140 T
i Macaca_tonkeana.k141_2870633                          C 0 I 3
s Mandrillus_leucophaeus.scaffold125                     43437317 1 -  43563597 T
i Mandrillus_leucophaeus.scaffold125                    C 0 I 2
s Mandrillus_sphinx.Contig144                             4450143 1 -   4543643 T
i Mandrillus_sphinx.Contig144                           C 0 I 2
s Miopithecus_ogouensis.k141_2935907                         1870 1 +     29742 G
i Miopithecus_ogouensis.k141_2935907                    C 0 I 2
s Nasalis_larvatus.k141_153429                               8371 1 +     48152 T
i Nasalis_larvatus.k141_153429                          C 0 I 6
s Nomascus_annamensis.k141_220265                             293 1 +      1763 G
i Nomascus_annamensis.k141_220265                       C 0 C 0
s Nomascus_concolor.k141_226614                              1086 1 -      5092 G
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_39679                               54 1 -     17937 G
i Nomascus_gabriellae.k141_39679                        C 0 C 0
s Nomascus_siki_b.tarseq_80                             24804 1 -  18771707 G
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  2507 1 +      4512 G
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Pan_paniscus.CM003386.1                               127574517 1 - 205426864 G
i Pan_paniscus.CM003386.1                               C 0 I 2
s Pan_troglodytes.CM009241.2                            120151670 1 - 196562556 g
i Pan_troglodytes.CM009241.2                            C 0 I 2
s Papio_anubis.CM001492.2                               188156105 1 - 188283584 t
i Papio_anubis.CM001492.2                               C 0 I 2
s Papio_cynocephalus.k141_883042                             4421 1 +      5367 T
i Papio_cynocephalus.k141_883042                        C 0 I 2
s Papio_hamadryas.Contig15                               47513490 1 +  47705337 T
i Papio_hamadryas.Contig15                              C 0 I 2
s Papio_kindae.k141_5458022                                 67469 1 -    104429 T
i Papio_kindae.k141_5458022                             C 0 I 2
s Papio_papio.k141_979496                                    6002 1 +     14967 T
i Papio_papio.k141_979496                               C 0 I 2
s Papio_ursinus.k141_1345919                                 1862 1 -      7628 T
i Papio_ursinus.k141_1345919                            C 0 I 2
s Piliocolobus_badius.k141_1987485                           1890 1 -      5908 G
i Piliocolobus_badius.k141_1987485                      C 0 I 6
s Piliocolobus_gordonorum.k141_1270531                       2514 1 -     17985 G
i Piliocolobus_gordonorum.k141_1270531                  C 0 I 6
s Piliocolobus_kirkii.k141_929665                            1881 1 +      7694 G
i Piliocolobus_kirkii.k141_929665                       C 0 I 6
s Piliocolobus_tephrosceles.PDMG02000036.1               26740359 1 +  26888534 g
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 I 6
s Pithecia_albicans.k141_991845                             43488 1 -     61926 A
i Pithecia_albicans.k141_991845                         C 0 I 2
s Pithecia_chrysocephala.k141_159118                        24919 1 +     78826 A
i Pithecia_chrysocephala.k141_159118                    C 0 I 2
s Pithecia_hirsuta.k141_1152968                              8876 1 -     15800 A
i Pithecia_hirsuta.k141_1152968                         C 0 I 48
s Pithecia_mittermeieri.k141_2119203                        12074 1 -     16101 A
i Pithecia_mittermeieri.k141_2119203                    C 0 I 49
s Pithecia_pissinattii.k141_1102319                          5375 1 +      9673 A
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13474371 1 -  19735023 A
i Pithecia_pithecia.tarseq_313                          C 0 I 2
s Pithecia_vanzolinii.k141_831006                           13277 1 -     31692 A
i Pithecia_vanzolinii.k141_831006                       C 0 I 2
s Plecturocebus_bernhardi.k141_959214                       22717 1 +     44506 A
i Plecturocebus_bernhardi.k141_959214                   C 0 I 2
s Plecturocebus_brunneus.k141_498086                        22930 1 +     67491 A
i Plecturocebus_brunneus.k141_498086                    C 0 I 2
s Plecturocebus_caligatus.k141_2539816                      13169 1 -     98129 A
i Plecturocebus_caligatus.k141_2539816                  C 0 I 2
s Plecturocebus_cinerascens.k141_744510                     22769 1 +    147771 A
i Plecturocebus_cinerascens.k141_744510                 C 0 I 2
s Plecturocebus_cupreus.k141_1223294                        23024 1 -     23762 A
i Plecturocebus_cupreus.k141_1223294                    C 0 I 2
s Plecturocebus_dubius.k141_3565563                          3490 1 -     55515 A
i Plecturocebus_dubius.k141_3565563                     C 0 I 2
s Plecturocebus_grovesi.k141_242819                         22843 1 +    152463 A
i Plecturocebus_grovesi.k141_242819                     C 0 I 2
s Plecturocebus_hoffmannsi.k141_985533                        560 1 -    119457 A
i Plecturocebus_hoffmannsi.k141_985533                  C 0 I 2
s Plecturocebus_miltoni.k141_841561                         12565 1 +    134592 A
i Plecturocebus_miltoni.k141_841561                     C 0 I 2
s Plecturocebus_moloch.k141_890597                          23153 1 -     75465 A
i Plecturocebus_moloch.k141_890597                      C 0 I 2
s Pongo_abelii.NDHI03003816.1                              187039 1 -    373494 G
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19807687 1 +  19899266 G
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               5616 1 -     15069 T
i Presbytis_comata.k141_672698                          C 0 I 6
s Presbytis_mitrata.k141_860013                              5750 1 +     14865 T
i Presbytis_mitrata.k141_860013                         C 0 I 6
s Pygathrix_cinerea.k141_374971                             29737 1 +     56732 T
i Pygathrix_cinerea.k141_374971                         I 3 I 6
s Pygathrix_nigripes_b.ctg79                                 6806227 1 +   6970761 T
i Pygathrix_nigripes_b.ctg79                               I 2 I 6
s Pygathrix_nigripes_a.k141_101123                             5621 1 +     18040 T
i Pygathrix_nigripes_a.k141_101123                        I 2 I 6
s Rhinopithecus_bieti.k119_554384                              15 1 -     17045 T
i Rhinopithecus_bieti.k119_554384                       N 0 I 6
s Rhinopithecus_roxellana.NC_044549.1                   206377506 1 - 206558726 t
i Rhinopithecus_roxellana.NC_044549.1                   I 2 I 6
s Rhinopithecus_strykeri.ctg4                            44856406 1 -  45163003 T
i Rhinopithecus_strykeri.ctg4                           I 2 I 6
s Saimiri_boliviensis.NW_024100938.1                     15672583 1 -  43202129 a
i Saimiri_boliviensis.NW_024100938.1                    C 0 I 2
s Saimiri_cassiquiarensis.k141_808270                        4500 1 +     34089 A
i Saimiri_cassiquiarensis.k141_808270                   C 0 I 2
s Saimiri_macrodon.k141_2087127                              4441 1 -     60842 A
i Saimiri_macrodon.k141_2087127                         C 0 I 2
s Saimiri_oerstedii.k141_841116                              4536 1 +     67014 A
i Saimiri_oerstedii.k141_841116                         C 0 I 2
s Saimiri_sciureus.k141_1947592                              4514 1 +     60816 A
i Saimiri_sciureus.k141_1947592                         C 0 I 2
s Saimiri_ustus.k141_1282476                                 4451 1 -     76454 A
i Saimiri_ustus.k141_1282476                            C 0 I 2
s Sapajus_apella.ctg10                                   17341176 1 -  30362882 A
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         20535 1 -     62485 A
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        14789 1 -  13920577 G
i Symphalangus_syndactylus.tarseq_24                    I 31 C 0
s Theropithecus_gelada.CM009951.1                       194007631 1 - 194193292 t
i Theropithecus_gelada.CM009951.1                       C 0 I 2
s Trachypithecus_auratus.k141_738098                        26735 1 +     38948 G
i Trachypithecus_auratus.k141_738098                    C 0 I 4
s Trachypithecus_crepusculus.k141_1588528                   20464 1 -     32910 T
i Trachypithecus_crepusculus.k141_1588528               C 0 I 6
s Trachypithecus_cristatus.k141_1011511                      1852 1 -     12939 G
i Trachypithecus_cristatus.k141_1011511                 C 0 I 4
s Trachypithecus_francoisi.k141_768164                       1786 1 -     14244 T
i Trachypithecus_francoisi.k141_768164                  C 0 I 6
s Trachypithecus_germaini.k141_868450                         991 1 -     11566 G
i Trachypithecus_germaini.k141_868450                   C 0 I 6
s Trachypithecus_hatinhensis.k141_504423                     3163 1 -     15592 T
i Trachypithecus_hatinhensis.k141_504423                C 0 I 6
s Trachypithecus_laotum.k141_760702                          1820 1 +     14371 T
i Trachypithecus_laotum.k141_760702                     C 0 I 6
s Trachypithecus_leucocephalus.k141_381681                    102 1 +     12481 T
i Trachypithecus_leucocephalus.k141_381681              I 56 I 6
s Trachypithecus_phayrei.ctg3                            44660023 1 -  44834318 T
i Trachypithecus_phayrei.ctg3                           C 0 I 6
e Eptesicus_fuscus.JH977687.1                             4703942 0 +   6522550 C
e Macroglossus_sobrinus.MacSob_scaffold_879                701370 0 +    802869 C
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             38964 0 -     47444 C
e Petromus_typicus.PetTyp_scaffold_33007                    12255 0 -     36578 C
e Sorex_araneus.JH798170.1                               17750754 3364 -  27805282 I
e Dinomys_branickii.DinBra_scaffold_1996                   156781 0 +    228994 C
e Erinaceus_europaeus.JH835290.1                         11534163 4 +  16010500 I
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           2555 0 -      6963 C
e Aplodontia_rufa.AprRuf_scaffold_156013                     3474 0 +      5067 C
e Oryctolagus_cuniculus.CM000803.1                      141876069 1 + 163896628 I
e Ochotona_princeps.JH802095.1                            4995784 6 -  23139505 I
e Lepus_americanus.LepAme_scaffold_62849                    13021 15 +     22452 I
e Perognathus_longimembris.PerPac_flattened_line_22291      44353 0 -     45160 C
e Dipodomys_stephensi.DipSte_scaffold_44365                 27731 0 +     28912 C
e Dipodomys_ordii.KN672545.1                              3656098 0 +   4240102 C
e Suricata_suricatta.SurSur_flattened_line_20339            27350 0 +     62062 C
e Chrysochloris_asiatica.ChrAsi_scaffold_3549804              169 5 -       354 I
e Ziphius_cavirostris.ZipCav_flattened_line_127025           6686 0 -      8775 C
e Zalophus_californianus.ZalCal_flattened_line_4097        214052 0 -    227762 C
e Vulpes_lagopus.VulLag_flattened_line_2045                138082 0 -    281493 C
e Vicugna_pacos.KN269600.1                                1524431 0 -   2331223 C
e Ursus_maritimus.KK498671.1                              6514575 0 +  28682327 C
e Uropsilus_gracilis.UroGra_scaffold_69449                   1093 0 +     10241 C
e Tursiops_truncatus.MRVK01000923.1                      69313186 0 -  96451834 C
e Trichechus_manatus.JH594618.1                          16084657 0 +  31416278 C
e Tragulus_javanicus.TraJav_scaffold_14717                   4932 0 +     90398 C
e Tonatia_saurophila.TonSau_scaffold_3334                  135629 0 -    259118 C
e Tolypeutes_matacus.TolMat_scaffold_269431                  5311 0 +      6782 C
e Tapirus_terrestris.TapTer_scaffold_14939                  57590 0 +     99546 C
e Tapirus_indicus.TapInd_scaffold_176                      806895 0 +   1148477 C
e Tamandua_tetradactyla.TamTet_scaffold_26877               14473 6 +     45698 I
e Tadarida_brasiliensis.TadBra_scaffold_61492                  20 203 +     20549 I
e Sus_scrofa.CM000824.4                                 189271618 0 + 218635234 C
e Spilogale_gracilis.SpiGra_flattened_line_905             234558 0 -    276980 C
e Solenodon_paradoxus.SolPar_flattened_line_1012            18635 0 +    739146 C
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   32046 14 -    114521 I
e Saiga_tatarica.SaiTat_scaffold_82192                       7705 0 +     12214 C
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                19076 0 +    109198 C
e Rhinolophus_sinicus.LVEH01000179.1                      1787585 1 +   2252614 I
e Rangifer_tarandus.RanTarSib_scaffold_24239                15538 0 +     68503 C
e Puma_concolor.QAVW01000427.1                          131534091 0 - 161321710 C
e Pteropus_vampyrus.KN525959.1                             603701 0 -   3946241 C
e Pteropus_alecto.KB031157.1                             13245751 0 -  17261082 C
e Pteronura_brasiliensis.PteBra_flattened_line_1343        246438 0 -    344369 C
e Pteronotus_parnellii.KE867983.1                            3637 0 -     27784 C
e Procavia_capensis.ProCapCap_scaffold_149274                1510 0 -      9567 C
e Platanista_gangetica.PlaMin_flattened_line_72990           5163 0 +     21690 C
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            97242 0 +    112873 C
e Phocoena_phocoena.PhoPho_flattened_line_11948            121076 0 -    122454 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    115565 0 -    135482 C
e Pantholops_hodgsonii.KE114631.1                         1065879 0 -   1292953 C
e Panthera_tigris.KE721879.1                              5027513 0 -   6340057 C
e Panthera_pardus.KV860323.1                              3637840 0 +  18214204 C
e Panthera_onca.PanOnc_flattened_line_1615                  34104 0 +    295523 C
e Ovis_canadensis.OviCan_scaffold_6251                      78233 0 +    140051 C
e Ovis_aries.CM001582.2                                 134077019 0 - 275406953 C
e Otocyon_megalotis.JAEUCK010005121.1                      307990 0 -    505867 C
e Orycteropus_afer.OryAfe_flattened_line_13509              57315 0 -     66828 C
e Orcinus_orca.KB316965.1                                 7224471 0 -   7562323 C
e Okapia_johnstoni.LVCL01S0017931.1                         36758 0 +     78940 C
e Odocoileus_virginianus.KZ101650.1                       1079461 0 +   1425656 C
e Odobenus_rosmarus.KB229369.1                             679326 0 -   3126709 C
e Nyctereutes_procyonoides.CAJHUB010000786.1                30704 0 +   3668941 C
e Noctilio_leporinus.NocLep_scaffold_12062                  49084 0 +     94413 C
e Neophocaena_asiaeorientalis.KZ688543.1                  3950786 0 -   4490290 C
e Neomonachus_schauinslandi.NINY01007774.1                4484661 0 -  14209539 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             4810 6 -      8794 I
e Myotis_myotis.MyoMyo_scaffold_6123                        10418 0 +     66751 C
e Myotis_lucifugus.GL429887.1                             3465205 0 -   3747815 C
e Myotis_davidii.KB114863.1                               5019300 0 +   6462685 C
e Myotis_brandtii.KE161952.1                               967623 0 +   8389877 C
e Mustela_putorius.JH417978.1                             4424129 0 -  28371801 C
e Murina_feae.MurFea_scaffold_2254                          19313 0 -    100666 C
e Mungos_mungo.MunMun_flattened_line_8729                  144688 0 -    168139 C
e Moschus_moschiferus.MosMos_scaffold_78805                  1254 0 -     19904 C
e Mormoops_blainvillei.MorMeg_scaffold_2952                160992 0 +    265003 C
e Monodon_monoceros.MonMon_M_scaffold_5598                 146174 0 +    154973 C
e Mirounga_angustirostris.MirAng_flattened_line_8852        11269 0 -    104932 C
e Miniopterus_schreibersii.MinSch_scaffold_24116            34118 0 +     45743 C
e Miniopterus_natalensis.LDJU01000022.1                   8209464 0 +  10048721 C
e Micronycteris_hirsuta.MicHir_scaffold_37978               22468 2 -     32043 I
e Microgale_talazaci.MicTal_scaffold_34660                  34274 0 -     48017 C
e Mesoplodon_bidens.MesBid_scaffold_227248                     79 0 -      1377 C
e Mellivora_capensis.MelCap_flattened_line_15433              759 0 -     87323 C
e Megaderma_lyra.MegLyr_scaffold_3562                       64187 1 -    234502 I
e Manis_pentadactyla.KN017078.1                             35471 0 +     58827 C
e Manis_javanica.JSZB01003966.1                            145394 0 +    252755 C
e Lycaon_pictus.CM007556.1                               11087903 0 +  39895028 C
e Loxodonta_africana.GL010040.1                          20594001 0 -  62548349 C
e Lipotes_vexillifer.KE558548.1                            135745 0 +   3060487 C
e Leptonychotes_weddellii.KB714749.1                      3085756 0 -   3498232 C
e Lasiurus_borealis.LasBor_scaffold_5102                   114032 0 -    115756 C
e Kogia_breviceps.KogBre_flattened_line_35920               23407 0 +     37189 C
e Inia_geoffrensis.IniGeo_flattened_line_66725               8789 0 +     17520 C
e Hyaena_hyaena.HyaHya_flattened_line_20729                 17063 0 -     67322 C
e Hipposideros_galeritus.HipGal_scaffold_104691              7309 1 -      9143 I
e Hipposideros_armiger.JXIK01001085.1                      278164 1 -    477199 I
e Hippopotamus_amphibius.HipAmp_scaffold_1308              146879 0 +    277961 C
e Heterohyrax_brucei.HetBruBak_scaffold_25354               60420 0 +     73687 C
e Hemitragus_hylocrius.HemHyl_scaffold_16669                27224 0 -     91191 C
e Helogale_parvula.HelPar_flattened_line_22962              16993 0 +     53719 C
e Giraffa_tippelskirchi.LVKQ01S012154.1                    181031 0 -    189561 C
e Felis_nigripes.FelNig_flattened_line_8080                 20943 0 +     52776 C
e Felis_catus_fca126.CM031420.1                         129279798 0 - 158578461 C
e Eubalaena_japonica.EubJap_flattened_line_7756             61252 0 +     89355 C
e Eschrichtius_robustus.EscRob_flattened_line_685          314800 0 +    330699 C
e Equus_przewalskii.ATBW01073585.1                          12734 0 +     92910 C
e Equus_caballus.CM000402.2                              13351244 0 +  41866177 C
e Equus_asinus.JREZ01000062.1                             5852741 0 -   7175178 C
e Enhydra_lutris.KZ291749.1                              85871950 0 +  99434291 C
e Elephantulus_edwardii.JH947210.1                        7815708 0 +  15467074 C
e Elaphurus_davidianus.JRFZ01086400.1                     1491230 0 +   1727528 C
e Eidolon_helvum.KE772537.1                                 11997 0 +     24177 C
e Echinops_telfairi.JH980316.1                           22998297 0 -  44670279 C
e Diceros_bicornis.DicBicMic_scaffold_9545                   2942 0 +    151128 C
e Dicerorhinus_sumatrensis.PEKH010003161.1                 322289 0 +    993696 C
e Desmodus_rotundus.KZ672188.1                           18698563 0 -  18957592 C
e Delphinapterus_leucas.KZ290064.1                       80036584 0 -  96802777 C
e Dasypus_novemcinctus.JH568778.1                          183442 0 -   6883506 C
e Cryptoprocta_ferox.CryFer_flattened_line_19014            51786 0 -     70449 C
e Crocidura_indochinensis.CroInd_scaffold_88140              1930 0 +     11655 C
e Craseonycteris_thonglongyai.CraTho_scaffold_22679         39468 1 -     40477 I
e Condylura_cristata.JH655880.1                          60613358 13 +  78930452 I
e Choloepus_hoffmanni.KN194586.1                           761558 0 +    964067 C
e Choloepus_didactylus.ChoDid_scaffold_36182                16251 0 -     21363 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_160623         3397 0 -      9338 C
e Catagonus_wagneri.CatWag_scaffold_1305                   158642 0 -    276539 C
e Carollia_perspicillata.CarPer_scaffold_4436               59289 0 +     67245 C
e Capra_hircus.CM004562.1                               135706180 0 - 157403528 C
e Capra_aegagrus.CM003214.1                              21324953 0 + 157394656 C
e Canis_lupus_orion.HG994411.1                           16455462 0 -  44759192 C
e Canis_lupus_familiaris.chr31                           11088447 0 +  39895921 C
e Canis_lupus_dingo.QKWQ01001993.1                       11265913 0 -  35597290 C
e Canis_lupus_VD.CanFam_VD_scaffold_16982                   14271 0 +     87036 C
e CanFam4.chr31                                          11519246 0 +  39901454 C
e Camelus_ferus.KB016973.1                                2972764 0 +   6889770 C
e Camelus_dromedarius.KN271192.1                           397029 0 -  15254737 C
e Camelus_bactrianus.KN276303.1                           3219327 0 -   8989139 C
e Bubalus_bubalis.KI419065.1                              1232538 0 -   1914593 C
e Bos_taurus.CM000177.6                                 136295455 0 - 158972876 C
e Bos_mutus.JH883513.1                                     572260 0 -    998990 C
e Bos_indicus.CM003021.1                                138139722 0 - 161108492 C
e Bison_bison.KN264915.1                                  6559618 0 +   6870073 C
e Beatragus_hunteri.BeaHun_scaffold_21644                   42945 0 -     72089 C
e Balaenoptera_bonaerensis.DF502048.1                        5130 0 -     13118 C
e Balaenoptera_acutorostrata.KI537095.1                  26379961 0 +  51448160 C
e Artibeus_jamaicensis.ArtJam_scaffold_41619                 8495 0 -     29036 C
e Antilocapra_americana.AntAmePen_scaffold_42841            30463 1 +     33004 I
e Anoura_caudifer.AnoCau_scaffold_422                      390087 0 -    631301 C
e Ammotragus_lervia.NIVO01013474.1                        3519877 0 +   4113121 C
e Ailurus_fulgens.LNAC01000003.1                          7094430 0 -  16596857 C
e Ailuropoda_melanoleuca.LNAT01000321.1                  10657087 0 +  23371972 C
e Acinonyx_jubatus.LLWD01000356.1                         2033752 0 +   3721120 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           18747 0 -    119109 C
e Glis_glis.GliGli_scaffold_79770                           12859 0 -     18683 C
e Zapus_hudsonius.ZapHud_scaffold_64392                     14762 8 -     20485 I
e Jaculus_jaculus.JH725517.1                              8565669 7 +  11848649 I
e Hylobates_pileatus_a.tarseq_592                             33391 319 -     60944 I
e Allactaga_bullata.AllBul_scaffold_70162                   16659 8 -     22067 I
e Galeopterus_variegatus.GalVar_scaffold_354               156064 0 +    324696 C
e Microtus_ochrogaster.CM001673.1                        22819858 0 -  98408828 C
e Xerus_inauris.XerIna_scaffold_7898                       126662 0 -    134049 C
e Varecia_variegata.k141_775891                             24644 1 -     33872 I
e Varecia_rubra.k141_432109                                  5103 1 -     20643 I
e Tupaia_tana.TupTan_flattened_line_68454                    4891 0 +     13056 C
e Tupaia_chinensis.KB320831.1                             2792678 0 -   3938065 C
e Trachypithecus_pileatus.k141_1022309                       2328 5 +     13828 I
e Trachypithecus_obscurus.k141_1115109                       5224 6 -     28054 I
e Trachypithecus_geei.k141_670367                           43185 5 -     54611 I
e Tarsius_wallacei.k141_48636                               59629 1 +     65473 I
e Tarsius_lariang.k141_609102                               26313 1 +     42269 I
e Spermophilus_dauricus.KZ294190.1                        2239554 0 +   2842873 C
e Sigmodon_hispidus.SigHis_scaffold_11332                  100095 0 -    120886 C
e Semnopithecus_vetulus.k141_1143185                        13575 4 +     30600 I
e Semnopithecus_schistaceus.k141_387461                     30531 4 +     42640 I
e Semnopithecus_priam.k141_410937                           37417 4 +     46263 I
e Semnopithecus_johnii.k141_785014                         118630 4 +    130994 I
e Semnopithecus_hypoleucos.k141_761524                       8628 4 +     20762 I
e Semnopithecus_entellus.k141_1572367                        3231 4 +     15331 I
e Rattus_norvegicus.chr11                                13915346 12 +  90463843 I
e Psammomys_obesus.NESX01026517.1                           34050 0 +     77221 C
e Propithecus_verreauxi.k141_158021                         39012 7 -     48185 I
e Propithecus_tattersalli.k141_907138                       16747 7 -     53241 I
e Propithecus_perrieri.k141_7554                            17112 4 +     27322 I
e Propithecus_edwardsi.k141_1317105                         35187 4 -     44753 I
e Propithecus_diadema.k141_577245                           42801 4 +     52369 I
e Propithecus_coronatus.k141_1353159                         3459 7 +     11805 I
e Propithecus_coquerelli.NW_012147997.1                    667273 6500 -   2312742 I
e Prolemur_simus.MPIZ01000048.1                           6848401 1 +  12164890 I
e Peromyscus_maniculatus.KI615518.1                       4950148 0 -   8017169 C
e Perodicticus_potto.k141_713187                            24534 1 -     27972 I
e Perodicticus_ibeanus.k141_117958                           5222 1 -     23713 I
e Otolemur_garnettii.GL873528.1                          18008501 0 -  38779656 C
e Otolemur_crassicaudatus.k141_505435                         530 0 -     53940 C
e Onychomys_torridus.OnyTor_scaffold_12578                  36911 0 +     62360 C
e Ondatra_zibethicus.OndZib_scaffold_6821                  125111 0 +    145789 C
e Octodon_degus.JH651621.1                                3685339 0 +  10294119 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65669227 5 +  89412551 I
e Nycticebus_coucang.k141_2051882                            3622 5 +      6470 I
e Nycticebus_bengalensis.LG16                            65566893 5 -  95554990 I
e Nannospalax_galili.KL201303.1                            118466 0 +    362372 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     89783 0 -    117718 C
e Muscardinus_avellanarius.MusAve_scaffold_9643             11631 0 +     98495 C
e Mus_spretus.CM004110.1                                 74330595 0 +  97876770 C
e Mus_pahari.LT608305.1                                  67555645 0 +  89017189 C
e Mus_musculus.chr16                                     75489417 0 +  98207768 C
e Mus_caroli.LT608236.1                                  70766358 0 +  92629107 C
e Mirza_zaza.k141_226143                                     5427 0 +      8497 C
e Microcebus_murinus.CM007691.1                          16510041 0 +  47401472 C
e Mesocricetus_auratus.KB708139.1                         1046721 0 -  26018355 C
e Meriones_unguiculatus.MerUng_scaffold_52233               12524 0 +     15977 C
e Marmota_marmota.CZRN01000005.1                         36873478 0 +  64221397 C
e Loris_tardigradus.ctg97                                 3778218 5 +   6799190 I
e Loris_lydekkerianus.k141_550999                           10468 5 +     84689 I
e Lepilemur_septentrionalis.k141_578524                     31410 0 -     33031 C
e Lepilemur_ruficaudatus.k141_617879                        78414 0 +    116806 C
e Lepilemur_dorsalis.k141_134267                            53155 0 +     63517 C
e Lepilemur_ankaranensis.k141_884009                        23771 0 +     39228 C
e Lemur_catta.scaffold_1                                258407020 1 - 285822530 I
e Indri_indri.k141_4418183                                   1308 0 -      1457 C
e Ictidomys_tridecemlineatus.JH393315.1                   7125638 0 +  13083262 C
e Hystrix_cristata.HysCri_scaffold_50788                     5918 5 +     22540 I
e Heterocephalus_glaber.JH602058.1                        2550866 0 +  31725842 C
e Hapalemur_occidentalis.k141_797938                        45338 1 -     54384 I
e Hapalemur_meridionalis.k141_186231                        28715 1 -     42470 I
e Hapalemur_griseus.k141_1387522                             5465 1 +     56096 I
e Hapalemur_gilberti.k141_279011                              136 1 -     11661 I
e Hapalemur_alaotrensis.k141_1280836                         1659 1 +     10286 I
e Graphiurus_murinus.GraMur_scaffold_4493                   77404 0 +    118900 C
e Galagoides_demidoff.k141_1769638                          10161 0 +     27357 C
e Galago_senegalensis.k141_964197                           13089 0 -     43889 C
e Galago_moholi.ctg555                                     210714 0 -    847004 C
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I
e Eulemur_sanfordi.k141_186399                              15660 1 -     29447 I
e Eulemur_rufus.k141_1620292                                32939 1 +     46535 I
e Eulemur_rubriventer.k141_411740                           18202 1 +     26808 I
e Eulemur_mongoz.k141_825972                                15746 1 +     27497 I
e Eulemur_macaco.k141_1341545                               15472 1 +     16540 I
e Eulemur_fulvus.k141_653297                                11088 7 +    109717 I
e Eulemur_flavifrons.k141_903901                             7610 1 +     60246 I
e Eulemur_coronatus.k141_3240342                            11288 1 +     36558 I
e Eulemur_collaris.k141_311830                               4815 1 -      6809 I
e Eulemur_albifrons.k141_715837                              4882 1 +     13586 I
e Ellobius_talpinus.LOJH01090055.1                           6672 0 -      7838 C
e Ellobius_lutescens.LOEQ01003611.1                        239559 0 -    369425 C
e Dolichotis_patagonum.DolPat_scaffold_14102                35885 0 -     73477 C
e Daubentonia_madagascariensis.ctg11                     16844687 0 +  31942871 C
e Dasyprocta_punctata.DasPun_flattened_line_634             58635 0 -    236241 C
e Cuniculus_paca.CunPac_flattened_line_16637                17544 0 +     26546 C
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 30503 0 -     67205 C
e Ctenodactylus_gundi.CteGun_scaffold_447                  207922 0 -    956709 C
e Cricetulus_griseus.LT883672.1                          53029012 0 +  72327488 C
e Cricetomys_gambianus.CriGam_scaffold_949                 278329 0 -    399297 C
e Chinchilla_lanigera.JH721867.1                         15961528 0 +  43084221 C
e Cheirogaleus_medius.k141_133808                            7872 0 +     13308 C
e Cheirogaleus_major.k141_1157592                           58828 0 -     68416 C
e Cephalopachus_bancanus.k141_702587                         7865 1 +     21754 I
e Cavia_tschudii.CavTsc_scaffold_488                       176485 0 +    436027 C
e Cavia_porcellus.DS562889.1                             15798294 0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15786359 0 -  24422027 C
e Castor_canadensis.CasCan_scaffold_47037                   30492 0 +     33760 C
e Carlito_syrichta.NW_007248099.1                          308830 1 +    345090 I
e Avahi_peyrierasi.k141_798820                                161 0 +      6337 C
e Avahi_laniger.k141_2840928                                 6541 0 -     16375 C
e Arctocebus_calabarensis.k141_587554                         820 0 +      9265 C
e Acomys_cahirinus.AcoCah_scaffold_1625                    112379 0 -    189883 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               11634 2 +    209709 GT
s Acinonyx_jubatus.LLWD01000356.1                         2033752 1 +   3721120 a-
i Acinonyx_jubatus.LLWD01000356.1                       C 0 I 1
s Acomys_cahirinus.AcoCah_scaffold_1625                    112379 1 -    189883 A-
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10657087 1 +  23371972 t-
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 I 3
s Ailurus_fulgens.LNAC01000003.1                          7094430 1 -  16596857 t-
i Ailurus_fulgens.LNAC01000003.1                        C 0 I 1
s Allactaga_bullata.AllBul_scaffold_70162                   16667 1 -     22067 T-
i Allactaga_bullata.AllBul_scaffold_70162               I 8 C 0
s Allenopithecus_nigroviridis.k141_2469532                   1127 1 -     60446 T-
i Allenopithecus_nigroviridis.k141_2469532              I 2 I 2
s Allochrocebus_lhoesti.k141_3566948                         1850 1 -     29318 T-
i Allochrocebus_lhoesti.k141_3566948                    I 3 I 1
s Allochrocebus_preussi.k141_1108977                          785 1 +     38766 T-
i Allochrocebus_preussi.k141_1108977                    I 3 I 1
s Allochrocebus_solatus.k141_371672                          1744 1 -     80423 T-
i Allochrocebus_solatus.k141_371672                     I 3 I 1
s Alouatta_belzebul.k141_1818029                            10040 1 -     18050 T-
i Alouatta_belzebul.k141_1818029                        I 2 I 1
s Alouatta_caraya.k141_5460                                 11133 1 -     11521 T-
i Alouatta_caraya.k141_5460                             I 2 I 1
s Alouatta_discolor.k141_811576                             10717 1 -     21359 T-
i Alouatta_discolor.k141_811576                         I 2 I 1
s Alouatta_juara.k141_1244470                                 332 1 +      2129 T-
i Alouatta_juara.k141_1244470                           I 2 I 1
s Alouatta_macconnelli.k141_1331706                         10016 1 -     10438 T-
i Alouatta_macconnelli.k141_1331706                     I 2 I 1
s Alouatta_nigerrima.k141_2718643                            6672 1 +      7047 T-
i Alouatta_nigerrima.k141_2718643                       I 2 I 1
s Alouatta_palliata.k141_1316127                             9951 1 +     10410 T-
i Alouatta_palliata.k141_1316127                        I 1 I 1
s Alouatta_puruensis.k141_1284840                            3760 1 -      4927 T-
i Alouatta_puruensis.k141_1284840                       I 2 I 1
s Ammotragus_lervia.NIVO01013474.1                        3519877 1 +   4113121 a-
i Ammotragus_lervia.NIVO01013474.1                      C 0 I 1
s Aotus_azarae.k141_3170768                                 62400 1 +     78111 T-
i Aotus_azarae.k141_3170768                             I 2 I 1
s Aotus_griseimembra.k141_3275623                            5343 1 +     22701 T-
i Aotus_griseimembra.k141_3275623                       I 2 C 0
s Aotus_nancymaae.KZ196176.1                              5749299 1 +   9889416 t-
i Aotus_nancymaae.KZ196176.1                            I 2 I 1
s Aotus_trivirgatus.k141_1740727                             5885 1 -    104377 T-
i Aotus_trivirgatus.k141_1740727                        I 2 I 1
s Aotus_vociferans.k141_718647                               5887 1 +     23246 T-
i Aotus_vociferans.k141_718647                          I 2 I 1
s Aplodontia_rufa.AprRuf_scaffold_156013                     3474 1 +      5067 A-
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 I 1
s Arctocebus_calabarensis.k141_587554                         820 1 +      9265 T-
i Arctocebus_calabarensis.k141_587554                   C 0 I 1
s Ateles_geoffroyi_b.tarseq_2582                             9539147 1 +  39197703 T-
i Ateles_geoffroyi_b.tarseq_2582                           I 2 I 1
s Ateles_belzebuth.k141_1348307                             60420 1 +     85812 T-
i Ateles_belzebuth.k141_1348307                         I 2 I 1
s Ateles_chamek.k141_1072810                                11432 1 +     89302 T-
i Ateles_chamek.k141_1072810                            I 2 I 1
s Ateles_geoffroyi_a.k141_1300742                             15935 1 -     58268 T-
i Ateles_geoffroyi_a.k141_1300742                         I 2 I 1
s Ateles_marginatus.k141_899112                             63927 1 +    119057 T-
i Ateles_marginatus.k141_899112                         I 1 I 1
s Ateles_paniscus.k141_1631200                               5897 1 -     25888 T-
i Ateles_paniscus.k141_1631200                          I 2 I 1
s Avahi_laniger.k141_2840928                                 6541 1 -     16375 A-
i Avahi_laniger.k141_2840928                            C 0 I 8
s Avahi_peyrierasi.k141_798820                                161 1 +      6337 A-
i Avahi_peyrierasi.k141_798820                          C 0 I 8
s Balaenoptera_acutorostrata.KI537095.1                  26379961 1 +  51448160 G-
i Balaenoptera_acutorostrata.KI537095.1                 C 0 I 2
s Balaenoptera_bonaerensis.DF502048.1                        5130 1 -     13118 G-
i Balaenoptera_bonaerensis.DF502048.1                   C 0 I 2
s Beatragus_hunteri.BeaHun_scaffold_21644                   42945 1 -     72089 A-
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 I 1
s Bison_bison.KN264915.1                                  6559618 1 +   6870073 a-
i Bison_bison.KN264915.1                                C 0 I 1
s Bos_indicus.CM003021.1                                138139722 1 - 161108492 a-
i Bos_indicus.CM003021.1                                C 0 I 1
s Bos_mutus.JH883513.1                                     572260 1 -    998990 a-
i Bos_mutus.JH883513.1                                  C 0 I 1
s Bos_taurus.CM000177.6                                 136295455 1 - 158972876 a-
i Bos_taurus.CM000177.6                                 C 0 I 1
s Bubalus_bubalis.KI419065.1                              1232538 1 -   1914593 a-
i Bubalus_bubalis.KI419065.1                            C 0 I 1
s Camelus_bactrianus.KN276303.1                           3219327 1 -   8989139 a-
i Camelus_bactrianus.KN276303.1                         C 0 I 7
s Camelus_dromedarius.KN271192.1                           397029 1 -  15254737 a-
i Camelus_dromedarius.KN271192.1                        C 0 I 7
s Camelus_ferus.KB016973.1                                2972764 1 +   6889770 a-
i Camelus_ferus.KB016973.1                              C 0 I 7
s CanFam4.chr31                                          11519246 1 +  39901454 A-
i CanFam4.chr31                                         C 0 I 1
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   14271 1 +     87036 A-
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 I 1
s Canis_lupus_dingo.QKWQ01001993.1                       11265913 1 -  35597290 a-
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 I 1
s Canis_lupus_familiaris.chr31                           11088447 1 +  39895921 a-
i Canis_lupus_familiaris.chr31                          C 0 I 1
s Canis_lupus_orion.HG994411.1                           16455462 1 -  44759192 a-
i Canis_lupus_orion.HG994411.1                          C 0 I 1
s Capra_aegagrus.CM003214.1                              21324953 1 + 157394656 a-
i Capra_aegagrus.CM003214.1                             C 0 I 1
s Capra_hircus.CM004562.1                               135706180 1 - 157403528 a-
i Capra_hircus.CM004562.1                               C 0 I 1
s Castor_canadensis.CasCan_scaffold_47037                   30492 1 +     33760 A-
i Castor_canadensis.CasCan_scaffold_47037               C 0 I 1
s Catagonus_wagneri.CatWag_scaffold_1305                   158642 1 -    276539 A-
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 I 1
s Cavia_aperea.AVPZ01000278.1                            15786359 1 -  24422027 t-
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15798294 1 -  24440124 t-
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       176485 1 +    436027 T-
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4363640 1 +   7569818 a-
i Ceratotherium_simum.JH767818.1                        C 0 I 1
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         3397 1 -      9338 A-
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 I 1
s Cercocebus_atys.KQ010443.1                              6555072 1 +   6739814 t-
i Cercocebus_atys.KQ010443.1                            I 2 I 1
s Cercocebus_chrysogaster.k141_2328246                      26549 1 +     60454 T-
i Cercocebus_chrysogaster.k141_2328246                  I 2 I 1
s Cercocebus_lunulatus.k141_4634644                          1754 1 -     21101 T-
i Cercocebus_lunulatus.k141_4634644                     I 2 I 1
s Cercocebus_torquatus.k141_3969582                         59064 1 -    107033 T-
i Cercocebus_torquatus.k141_3969582                     I 2 I 1
s Cercopithecus_ascanius.k141_4123525                        1954 1 -     17608 T-
i Cercopithecus_ascanius.k141_4123525                   C 0 I 1
s Cercopithecus_cephus.k141_598190                          29449 1 +     30494 T-
i Cercopithecus_cephus.k141_598190                      C 0 I 1
s Cercopithecus_diana.k141_2980617                          58295 1 -     59240 T-
i Cercopithecus_diana.k141_2980617                      C 0 I 1
s Cercopithecus_hamlyni.k141_129805                          1996 1 +     16677 G-
i Cercopithecus_hamlyni.k141_129805                     C 0 I 1
s Cercopithecus_lowei.k141_623764                           24154 1 +     35983 T-
i Cercopithecus_lowei.k141_623764                       C 0 I 1
s Cercopithecus_albogularis.ctg51                              11990682 1 +  12117833 T-
i Cercopithecus_albogularis.ctg51                             C 0 I 1
s Cercopithecus_mona.ctg12                               46477440 1 +  46592721 T-
i Cercopithecus_mona.ctg12                              C 0 I 1
s Cercopithecus_neglectus.k141_2078027                      40991 1 -     45581 T-
i Cercopithecus_neglectus.k141_2078027                  C 0 I 1
s Cercopithecus_nictitans.k141_1129315                       1997 1 +     35577 T-
i Cercopithecus_nictitans.k141_1129315                  C 0 I 1
s Cercopithecus_petaurista.k141_64532                        1773 1 -     25661 T-
i Cercopithecus_petaurista.k141_64532                   C 0 I 1
s Cercopithecus_pogonias.k141_3109732                        1751 1 -     17744 T-
i Cercopithecus_pogonias.k141_3109732                   C 0 I 1
s Cercopithecus_roloway.k141_2263608                        21367 1 +     37128 T-
i Cercopithecus_roloway.k141_2263608                    C 0 I 1
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           2555 1 -      6963 A-
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           58828 1 -     68416 G-
i Cheirogaleus_major.k141_1157592                       C 0 I 5
s Cheirogaleus_medius.k141_133808                            7872 1 +     13308 G-
i Cheirogaleus_medius.k141_133808                       C 0 I 5
s Cheracebus_lucifer.k141_619653                             5437 1 -     18223 T-
i Cheracebus_lucifer.k141_619653                        I 2 I 1
s Cheracebus_lugens.k141_203936                             22458 1 +     25473 T-
i Cheracebus_lugens.k141_203936                         I 2 I 1
s Cheracebus_regulus.k141_2128895                           41495 1 +     57117 T-
i Cheracebus_regulus.k141_2128895                       I 2 I 1
s Cheracebus_torquatus.k141_315545                          46174 1 +     54541 T-
i Cheracebus_torquatus.k141_315545                      I 2 I 1
s Chinchilla_lanigera.JH721867.1                         15961528 1 +  43084221 a-
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chlorocebus_aethiops.ctg22                             15138918 1 -  15256731 T-
i Chlorocebus_aethiops.ctg22                            I 6 I 1
s Chlorocebus_pygerythrus.k141_1486215                      33966 1 -     53260 T-
i Chlorocebus_pygerythrus.k141_1486215                  I 7 I 1
s Chlorocebus_sabaeus.CM001963.2                        101144526 1 + 101219884 t-
i Chlorocebus_sabaeus.CM001963.2                        I 3 I 1
s Choloepus_didactylus.ChoDid_scaffold_36182                16251 1 -     21363 A-
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           761558 1 +    964067 a-
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_3549804              174 1 -       354 A-
i Chrysochloris_asiatica.ChrAsi_scaffold_3549804        I 5 C 0
s Colobus_angolensis.KN985967.1                          10886297 1 +  10971483 t-
i Colobus_angolensis.KN985967.1                         I 7 I 1
s Colobus_guereza.LG08                                  147664463 1 + 156195979 T-
i Colobus_guereza.LG08                                  I 9 I 1
s Colobus_polykomos.k141_1406057                            16448 1 +     23629 T-
i Colobus_polykomos.k141_1406057                        I 9 I 1
s Condylura_cristata.JH655880.1                          60613371 1 +  78930452 t-
i Condylura_cristata.JH655880.1                         I 13 I 1
s Cricetomys_gambianus.CriGam_scaffold_949                 278329 1 -    399297 A-
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53029012 1 +  72327488 A-
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_88140              1930 1 +     11655 A-
i Crocidura_indochinensis.CroInd_scaffold_88140         C 0 I 1
s Cryptoprocta_ferox.CryFer_flattened_line_19014            51786 1 -     70449 A-
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 I 1
s Ctenodactylus_gundi.CteGun_scaffold_447                  207922 1 -    956709 A-
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 I 1
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 30503 1 -     67205 A-
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                17544 1 +     26546 T-
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             58635 1 -    236241 T-
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          183442 1 -   6883506 A-
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16844687 1 +  31942871 G-
i Daubentonia_madagascariensis.ctg11                    C 0 I 1
s Delphinapterus_leucas.KZ290064.1                       80036584 1 -  96802777 G-
i Delphinapterus_leucas.KZ290064.1                      C 0 I 2
s Desmodus_rotundus.KZ672188.1                           18698563 1 -  18957592 t-
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 322289 1 +    993696 a-
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 I 1
s Diceros_bicornis.DicBicMic_scaffold_9545                   2942 1 +    151128 A-
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 I 1
s Dinomys_branickii.DinBra_scaffold_1996                   156781 1 +    228994 A-
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3656098 1 +   4240102 A-
i Dipodomys_ordii.KN672545.1                            C 0 I 1
s Dipodomys_stephensi.DipSte_scaffold_44365                 27731 1 +     28912 A-
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 I 1
s Dolichotis_patagonum.DolPat_scaffold_14102                35885 1 -     73477 T-
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22998297 1 -  44670279 A-
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1491230 1 +   1727528 a-
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 I 1
s Elephantulus_edwardii.JH947210.1                        7815708 1 +  15467074 A-
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        239559 1 -    369425 A-
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           6672 1 -      7838 A-
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85871950 1 +  99434291 t-
i Enhydra_lutris.KZ291749.1                             C 0 I 1
s Equus_asinus.JREZ01000062.1                             5852741 1 -   7175178 A-
i Equus_asinus.JREZ01000062.1                           C 0 I 1
s Equus_caballus.CM000402.2                              13351244 1 +  41866177 A-
i Equus_caballus.CM000402.2                             C 0 I 1
s Equus_przewalskii.ATBW01073585.1                          12734 1 +     92910 a-
i Equus_przewalskii.ATBW01073585.1                      C 0 I 1
s Erythrocebus_patas.Contig8                             48771093 1 -  48907691 T-
i Erythrocebus_patas.Contig8                            I 3 I 1
s Eschrichtius_robustus.EscRob_flattened_line_685          314800 1 +    330699 G-
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 I 2
s Eubalaena_japonica.EubJap_flattened_line_7756             61252 1 +     89355 G-
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 I 2
s Eulemur_albifrons.k141_715837                              4883 1 +     13586 G-
i Eulemur_albifrons.k141_715837                         I 1 I 6
s Eulemur_collaris.k141_311830                               4816 1 -      6809 G-
i Eulemur_collaris.k141_311830                          I 1 I 4
s Eulemur_coronatus.k141_3240342                            11289 1 +     36558 A-
i Eulemur_coronatus.k141_3240342                        I 1 I 6
s Eulemur_flavifrons.k141_903901                             7611 1 +     60246 G-
i Eulemur_flavifrons.k141_903901                        I 1 I 6
s Eulemur_macaco.k141_1341545                               15473 1 +     16540 G-
i Eulemur_macaco.k141_1341545                           I 1 I 6
s Eulemur_mongoz.k141_825972                                15747 1 +     27497 G-
i Eulemur_mongoz.k141_825972                            I 1 I 6
s Eulemur_rubriventer.k141_411740                           18203 1 +     26808 G-
i Eulemur_rubriventer.k141_411740                       I 1 I 9
s Eulemur_rufus.k141_1620292                                32940 1 +     46535 G-
i Eulemur_rufus.k141_1620292                            I 1 I 6
s Eulemur_sanfordi.k141_186399                              15661 1 -     29447 G-
i Eulemur_sanfordi.k141_186399                          I 1 I 6
s Felis_catus.CM001386.2                                129892711 1 - 159252932 a-
i Felis_catus.CM001386.2                                C 0 I 1
s Felis_catus_fca126.CM031420.1                         129279798 1 - 158578461 a-
i Felis_catus_fca126.CM031420.1                         C 0 I 1
s Felis_nigripes.FelNig_flattened_line_8080                 20943 1 +     52776 A-
i Felis_nigripes.FelNig_flattened_line_8080             C 0 I 1
s Galago_moholi.ctg555                                     210714 1 -    847004 T-
i Galago_moholi.ctg555                                  C 0 I 1
s Galago_senegalensis.k141_964197                           13089 1 -     43889 T-
i Galago_senegalensis.k141_964197                       C 0 I 1
s Galagoides_demidoff.k141_1769638                          10161 1 +     27357 T-
i Galagoides_demidoff.k141_1769638                      C 0 I 1
s Galeopterus_variegatus.GalVar_scaffold_354               156064 1 +    324696 A-
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 I 1
s Giraffa_tippelskirchi.LVKQ01S012154.1                    181031 1 -    189561 a-
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 I 1
s Glis_glis.GliGli_scaffold_79770                           12859 1 -     18683 A-
i Glis_glis.GliGli_scaffold_79770                       C 0 I 1
s Gorilla_beringei.k141_111300                               5152 1 -     14630 T-
i Gorilla_beringei.k141_111300                          C 0 I 1
s Gorilla_gorilla.LT578340.1                            119652251 1 - 195582420 T-
i Gorilla_gorilla.LT578340.1                            C 0 I 1
s Graphiurus_murinus.GraMur_scaffold_4493                   77404 1 +    118900 A-
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 I 1
s Hapalemur_alaotrensis.k141_1280836                         1660 1 +     10286 G-
i Hapalemur_alaotrensis.k141_1280836                    I 1 I 6
s Hapalemur_gilberti.k141_279011                              137 1 -     11661 G-
i Hapalemur_gilberti.k141_279011                        I 1 I 6
s Hapalemur_griseus.k141_1387522                             5466 1 +     56096 G-
i Hapalemur_griseus.k141_1387522                        I 1 I 6
s Hapalemur_meridionalis.k141_186231                        28716 1 -     42470 G-
i Hapalemur_meridionalis.k141_186231                    I 1 I 6
s Hapalemur_occidentalis.k141_797938                        45339 1 -     54384 G-
i Hapalemur_occidentalis.k141_797938                    I 1 I 6
s Helogale_parvula.HelPar_flattened_line_22962              16993 1 +     53719 A-
i Helogale_parvula.HelPar_flattened_line_22962          C 0 I 1
s Hemitragus_hylocrius.HemHyl_scaffold_16669                27224 1 -     91191 A-
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2550866 1 +  31725842 A-
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               60420 1 +     73687 A-
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              146879 1 +    277961 A-
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 I 1
s Hoolock_leuconedys.ctg79                                      4559 1 -   7690867 T-
i Hoolock_leuconedys.ctg79                                 C 0 I 1
s Hyaena_hyaena.HyaHya_flattened_line_20729                 17063 1 -     67322 A-
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 I 1
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           18747 1 -    119109 T-
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              4982 1 +      5897 T-
i Hylobates_abbotti.k141_493872                         C 0 I 1
s Hylobates_agilis.k141_624065                               1848 1 +      2112 T-
i Hylobates_agilis.k141_624065                          C 0 I 1
s Hylobates_klossii.k141_285563                                27 1 +      1026 T-
i Hylobates_klossii.k141_285563                         C 0 I 1
s Hylobates_pileatus_b.ContigUN                                 14624529 1 -  25970782 T-
i Hylobates_pileatus_b.ContigUN                                C 0 I 1
s Hylobates_muelleri.k141_1389047                            1784 1 -      2977 T-
i Hylobates_muelleri.k141_1389047                       C 0 I 1
s Hystrix_cristata.HysCri_scaffold_50788                     5923 1 +     22540 A-
i Hystrix_cristata.HysCri_scaffold_50788                I 5 I 2
s Ictidomys_tridecemlineatus.JH393315.1                   7125638 1 +  13083262 a-
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_4418183                                   1308 1 -      1457 G-
i Indri_indri.k141_4418183                              C 0 I 8
s Inia_geoffrensis.IniGeo_flattened_line_66725               8789 1 +     17520 G-
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 I 2
s Jaculus_jaculus.JH725517.1                              8565676 1 +  11848649 t-
i Jaculus_jaculus.JH725517.1                            I 7 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               23407 1 +     37189 G-
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 I 2
s Lagothrix_lagothricha.k141_12968                          50018 1 -    147782 T-
i Lagothrix_lagothricha.k141_12968                      I 2 I 1
s Lemur_catta.scaffold_1                                258407021 1 - 285822530 G-
i Lemur_catta.scaffold_1                                I 1 I 6
s Lepilemur_ankaranensis.k141_884009                        23771 1 +     39228 G-
i Lepilemur_ankaranensis.k141_884009                    C 0 I 3
s Lepilemur_dorsalis.k141_134267                            53155 1 +     63517 G-
i Lepilemur_dorsalis.k141_134267                        C 0 I 3
s Lepilemur_ruficaudatus.k141_617879                        78414 1 +    116806 G-
i Lepilemur_ruficaudatus.k141_617879                    C 0 I 3
s Lepilemur_septentrionalis.k141_578524                     31410 1 -     33031 G-
i Lepilemur_septentrionalis.k141_578524                 C 0 I 3
s Leptonychotes_weddellii.KB714749.1                      3085756 1 -   3498232 t-
i Leptonychotes_weddellii.KB714749.1                    C 0 I 1
s Lipotes_vexillifer.KE558548.1                            135745 1 +   3060487 g-
i Lipotes_vexillifer.KE558548.1                         C 0 I 2
s Lophocebus_aterrimus.ctg55                             19248161 1 +  19376315 T-
i Lophocebus_aterrimus.ctg55                            I 4 I 1
s Loris_lydekkerianus.k141_550999                           10473 1 +     84689 T-
i Loris_lydekkerianus.k141_550999                       I 5 I 1
s Loris_tardigradus.ctg97                                 3778223 1 +   6799190 T-
i Loris_tardigradus.ctg97                               I 5 I 1
s Loxodonta_africana.GL010040.1                          20594001 1 -  62548349 a-
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11087903 1 +  39895028 a-
i Lycaon_pictus.CM007556.1                              C 0 I 1
s Macaca_arctoides.k141_2201161                             19902 1 +     74745 T-
i Macaca_arctoides.k141_2201161                         I 3 I 1
s Macaca_assamensis.Contig65                             12706356 1 +  12821369 T-
i Macaca_assamensis.Contig65                            I 1 I 3
s Macaca_fascicularis.k141_155037                           46820 1 +     63263 T-
i Macaca_fascicularis.k141_155037                       I 3 C 0
s Macaca_fuscata.k119_599327                                 1523 1 -      2568 T-
i Macaca_fuscata.k119_599327                            I 3 I 1
s Macaca_leonina.k141_467472                                 2110 1 -      7381 T-
i Macaca_leonina.k141_467472                            I 4 C 0
s Macaca_maura.k141_251854                                  45327 1 -     79256 T-
i Macaca_maura.k141_251854                              I 3 C 0
s Macaca_nemestrina.KQ004885.1                           11445604 1 +  11645122 t-
i Macaca_nemestrina.KQ004885.1                          I 4 C 0
s Macaca_nigra.k141_282495                                   4274 1 -     46448 T-
i Macaca_nigra.k141_282495                              I 3 C 0
s Macaca_radiata.k141_3680256                                1946 1 -     13212 T-
i Macaca_radiata.k141_3680256                           I 3 I 1
s Macaca_siberu.k141_741907                                 15627 1 -     55006 T-
i Macaca_siberu.k141_741907                             I 3 C 0
s Macaca_silenus.Contig12                                43840745 1 +  43892939 T-
i Macaca_silenus.Contig12                               I 4 C 0
s Macaca_thibetana.k99_662710                               16911 1 -     24607 T-
i Macaca_thibetana.k99_662710                           I 1 I 1
s Macaca_tonkeana.k141_2870633                               4279 1 -     27140 T-
i Macaca_tonkeana.k141_2870633                          I 3 C 0
s Mandrillus_leucophaeus.scaffold125                     43437320 1 -  43563597 T-
i Mandrillus_leucophaeus.scaffold125                    I 2 I 1
s Mandrillus_sphinx.Contig144                             4450146 1 -   4543643 T-
i Mandrillus_sphinx.Contig144                           I 2 I 1
s Manis_javanica.JSZB01003966.1                            145394 1 +    252755 a-
i Manis_javanica.JSZB01003966.1                         C 0 I 1
s Manis_pentadactyla.KN017078.1                             35471 1 +     58827 a-
i Manis_pentadactyla.KN017078.1                         C 0 I 1
s Marmota_marmota.CZRN01000005.1                         36873478 1 +  64221397 a-
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433              759 1 -     87323 T-
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 I 1
s Meriones_unguiculatus.MerUng_scaffold_52233               12524 1 +     15977 A-
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1046721 1 -  26018355 A-
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_227248                     79 1 -      1377 G-
i Mesoplodon_bidens.MesBid_scaffold_227248              C 0 I 2
s Microcebus_murinus.CM007691.1                          16510041 1 +  47401472 A-
i Microcebus_murinus.CM007691.1                         C 0 I 5
s Microgale_talazaci.MicTal_scaffold_34660                  34274 1 -     48017 A-
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22819858 1 -  98408828 A-
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         1873 1 +     29742 T-
i Miopithecus_ogouensis.k141_2935907                    I 2 I 1
s Mirounga_angustirostris.MirAng_flattened_line_8852        11269 1 -    104932 T-
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 I 1
s Mirza_zaza.k141_226143                                     5427 1 +      8497 A-
i Mirza_zaza.k141_226143                                C 0 I 5
s Monodon_monoceros.MonMon_M_scaffold_5598                 146174 1 +    154973 G-
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 I 2
s Mormoops_blainvillei.MorMeg_scaffold_2952                160992 1 +    265003 T-
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  1254 1 -     19904 A-
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 I 1
s Mungos_mungo.MunMun_flattened_line_8729                  144688 1 -    168139 A-
i Mungos_mungo.MunMun_flattened_line_8729               C 0 I 1
s Mus_caroli.LT608236.1                                  70766358 1 +  92629107 a-
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75489417 1 +  98207768 a-
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67555645 1 +  89017189 a-
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74330595 1 +  97876770 a-
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             11631 1 +     98495 A-
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 I 1
s Mustela_putorius.JH417978.1                             4424129 1 -  28371801 a-
i Mustela_putorius.JH417978.1                           C 0 I 1
s Myocastor_coypus.MyoCoy_scaffold_3653                     89783 1 -    117718 A-
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             4816 1 -      8794 A-
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        I 6 C 0
s Nannospalax_galili.KL201303.1                            118466 1 +    362372 A-
i Nannospalax_galili.KL201303.1                         C 0 I 1
s Nasalis_larvatus.k141_153429                               8378 1 +     48152 T-
i Nasalis_larvatus.k141_153429                          I 6 I 1
s Neomonachus_schauinslandi.NINY01007774.1                4484661 1 -  14209539 t-
i Neomonachus_schauinslandi.NINY01007774.1              C 0 I 1
s Neophocaena_asiaeorientalis.KZ688543.1                  3950786 1 -   4490290 G-
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 I 2
s Noctilio_leporinus.NocLep_scaffold_12062                  49084 1 +     94413 T-
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 I 1
s Nomascus_annamensis.k141_220265                             294 1 +      1763 T-
i Nomascus_annamensis.k141_220265                       C 0 I 1
s Nomascus_concolor.k141_226614                              1087 1 -      5092 T-
i Nomascus_concolor.k141_226614                         C 0 I 1
s Nomascus_gabriellae.k141_39679                               55 1 -     17937 T-
i Nomascus_gabriellae.k141_39679                        C 0 I 1
s Nomascus_siki_b.tarseq_80                             24805 1 -  18771707 T-
i Nomascus_siki_b.tarseq_80                         C 0 I 1
s Nomascus_siki_a.k141_595747                                  2508 1 +      4512 T-
i Nomascus_siki_a.k141_595747                             C 0 I 1
s Nyctereutes_procyonoides.CAJHUB010000786.1                30704 1 +   3668941 t-
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 I 1
s Nycticebus_bengalensis.LG16                            65566898 1 -  95554990 T-
i Nycticebus_bengalensis.LG16                           I 5 I 1
s Nycticebus_coucang.k141_2051882                            3627 1 +      6470 T-
i Nycticebus_coucang.k141_2051882                       I 5 I 1
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65669232 1 +  89412551 T-
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     I 5 I 1
s Octodon_degus.JH651621.1                                3685339 1 +  10294119 A-
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             679326 1 -   3126709 t-
i Odobenus_rosmarus.KB229369.1                          C 0 I 3
s Odocoileus_virginianus.KZ101650.1                       1079461 1 +   1425656 a-
i Odocoileus_virginianus.KZ101650.1                     C 0 I 1
s Okapia_johnstoni.LVCL01S0017931.1                         36758 1 +     78940 a-
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 I 1
s Ondatra_zibethicus.OndZib_scaffold_6821                  125111 1 +    145789 A-
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  36911 1 +     62360 A-
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7224471 1 -   7562323 G-
i Orcinus_orca.KB316965.1                               C 0 I 2
s Orycteropus_afer.OryAfe_flattened_line_13509              57315 1 -     66828 G-
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      307990 1 -    505867 a-
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 I 1
s Otolemur_crassicaudatus.k141_505435                         530 1 -     53940 T-
i Otolemur_crassicaudatus.k141_505435                   C 0 I 1
s Otolemur_garnettii.GL873528.1                          18008501 1 -  38779656 t-
i Otolemur_garnettii.GL873528.1                         C 0 I 1
s Ovis_aries.CM001582.2                                 134077019 1 - 275406953 a-
i Ovis_aries.CM001582.2                                 C 0 I 1
s Ovis_canadensis.OviCan_scaffold_6251                      78233 1 +    140051 A-
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 I 1
s Pan_paniscus.AJFE02002857.1                                 179 2 -      1091 tt
i Pan_paniscus.AJFE02002857.1                           I 106 I 302
s Pan_troglodytes.KZ622857.1                               327364 2 +    772158 tt
i Pan_troglodytes.KZ622857.1                            I 105 I 302
s Panthera_onca.PanOnc_flattened_line_1615                  34104 1 +    295523 A-
i Panthera_onca.PanOnc_flattened_line_1615              C 0 I 1
s Panthera_pardus.KV860323.1                              3637840 1 +  18214204 a-
i Panthera_pardus.KV860323.1                            C 0 I 1
s Panthera_tigris.KE721879.1                              5027513 1 -   6340057 a-
i Panthera_tigris.KE721879.1                            C 0 I 1
s Pantholops_hodgsonii.KE114631.1                         1065879 1 -   1292953 a-
i Pantholops_hodgsonii.KE114631.1                       C 0 I 1
s Papio_anubis.CM001492.2                               188156108 1 - 188283584 t-
i Papio_anubis.CM001492.2                               I 2 I 1
s Papio_cynocephalus.k141_883042                             4424 1 +      5367 T-
i Papio_cynocephalus.k141_883042                        I 2 I 1
s Papio_hamadryas.Contig15                               47513493 1 +  47705337 T-
i Papio_hamadryas.Contig15                              I 2 I 1
s Papio_kindae.k141_5458022                                 67472 1 -    104429 T-
i Papio_kindae.k141_5458022                             I 2 I 1
s Papio_papio.k141_979496                                    6005 1 +     14967 T-
i Papio_papio.k141_979496                               I 2 I 1
s Papio_ursinus.k141_1345919                                 1865 1 -      7628 T-
i Papio_ursinus.k141_1345919                            I 2 I 1
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    115565 1 -    135482 A-
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 I 2
s Perodicticus_ibeanus.k141_117958                           5223 1 -     23713 T-
i Perodicticus_ibeanus.k141_117958                      I 1 I 1
s Perodicticus_potto.k141_713187                            24535 1 -     27972 T-
i Perodicticus_potto.k141_713187                        I 1 I 1
s Perognathus_longimembris.PerPac_flattened_line_22291      44353 1 -     45160 A-
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 I 1
s Peromyscus_maniculatus.KI615518.1                       4950148 1 -   8017169 A-
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    12255 1 -     36578 A-
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            121076 1 -    122454 G-
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 I 2
s Piliocolobus_badius.k141_1987485                           1897 1 -      5908 T-
i Piliocolobus_badius.k141_1987485                      I 6 I 1
s Piliocolobus_gordonorum.k141_1270531                       2521 1 -     17985 T-
i Piliocolobus_gordonorum.k141_1270531                  I 6 I 1
s Piliocolobus_kirkii.k141_929665                            1888 1 +      7694 T-
i Piliocolobus_kirkii.k141_929665                       I 6 I 1
s Piliocolobus_tephrosceles.PDMG02000036.1               26740366 1 +  26888534 t-
i Piliocolobus_tephrosceles.PDMG02000036.1              I 6 I 1
s Pithecia_albicans.k141_991845                             43491 1 -     61926 T-
i Pithecia_albicans.k141_991845                         I 2 I 132
s Pithecia_chrysocephala.k141_159118                        24922 1 +     78826 T-
i Pithecia_chrysocephala.k141_159118                    I 2 I 1
s Pithecia_hirsuta.k141_1152968                              8925 1 -     15800 T-
i Pithecia_hirsuta.k141_1152968                         I 48 I 1
s Pithecia_mittermeieri.k141_2119203                        12124 1 -     16101 T-
i Pithecia_mittermeieri.k141_2119203                    I 49 I 1
s Pithecia_pithecia.tarseq_313                           13474374 1 -  19735023 T-
i Pithecia_pithecia.tarseq_313                          I 2 I 1
s Pithecia_vanzolinii.k141_831006                           13280 1 -     31692 T-
i Pithecia_vanzolinii.k141_831006                       I 2 I 1
s Platanista_gangetica.PlaMin_flattened_line_72990           5163 1 +     21690 G-
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 I 2
s Plecturocebus_bernhardi.k141_959214                       22720 1 +     44506 T-
i Plecturocebus_bernhardi.k141_959214                   I 2 I 1
s Plecturocebus_brunneus.k141_498086                        22933 1 +     67491 T-
i Plecturocebus_brunneus.k141_498086                    I 2 I 1
s Plecturocebus_caligatus.k141_2539816                      13172 1 -     98129 T-
i Plecturocebus_caligatus.k141_2539816                  I 2 I 1
s Plecturocebus_cinerascens.k141_744510                     22772 1 +    147771 T-
i Plecturocebus_cinerascens.k141_744510                 I 2 I 1
s Plecturocebus_cupreus.k141_1223294                        23027 1 -     23762 T-
i Plecturocebus_cupreus.k141_1223294                    I 2 I 1
s Plecturocebus_dubius.k141_3565563                          3493 1 -     55515 T-
i Plecturocebus_dubius.k141_3565563                     I 2 I 1
s Plecturocebus_grovesi.k141_242819                         22846 1 +    152463 T-
i Plecturocebus_grovesi.k141_242819                     I 2 I 1
s Plecturocebus_hoffmannsi.k141_985533                        563 1 -    119457 T-
i Plecturocebus_hoffmannsi.k141_985533                  I 2 I 1
s Plecturocebus_miltoni.k141_841561                         12568 1 +    134592 T-
i Plecturocebus_miltoni.k141_841561                     I 2 I 1
s Plecturocebus_moloch.k141_890597                          23156 1 -     75465 T-
i Plecturocebus_moloch.k141_890597                      I 2 I 1
s Pongo_abelii.NDHI03003816.1                              187040 1 -    373494 G-
i Pongo_abelii.NDHI03003816.1                           C 0 I 1
s Pongo_pygmaeus.ctg62                                   19807688 1 +  19899266 G-
i Pongo_pygmaeus.ctg62                                  C 0 I 1
s Presbytis_comata.k141_672698                               5623 1 -     15069 T-
i Presbytis_comata.k141_672698                          I 6 I 1
s Presbytis_mitrata.k141_860013                              5757 1 +     14865 T-
i Presbytis_mitrata.k141_860013                         I 6 I 1
s Procavia_capensis.ProCapCap_scaffold_149274                1510 1 -      9567 A-
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6848402 1 +  12164890 g-
i Prolemur_simus.MPIZ01000048.1                         I 1 I 6
s Psammomys_obesus.NESX01026517.1                           34050 1 +     77221 t-
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            3637 1 -     27784 t-
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        246438 1 -    344369 T-
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 I 1
s Puma_concolor.QAVW01000427.1                          131534091 1 - 161321710 a-
i Puma_concolor.QAVW01000427.1                          C 0 I 1
s Pygathrix_cinerea.k141_374971                             29744 1 +     56732 T-
i Pygathrix_cinerea.k141_374971                         I 6 I 1
s Pygathrix_nigripes_b.ctg79                                 6806234 1 +   6970761 T-
i Pygathrix_nigripes_b.ctg79                               I 6 I 1
s Pygathrix_nigripes_a.k141_101123                             5628 1 +     18040 T-
i Pygathrix_nigripes_a.k141_101123                        I 6 I 5
s Rangifer_tarandus.RanTarSib_scaffold_24239                15538 1 +     68503 A-
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 I 1
s Rattus_norvegicus.chr11                                13915358 1 +  90463843 a-
i Rattus_norvegicus.chr11                               I 12 C 0
s Rhinopithecus_bieti.k119_554384                              22 1 -     17045 T-
i Rhinopithecus_bieti.k119_554384                       I 6 I 1
s Rhinopithecus_roxellana.NC_044549.1                   206377513 1 - 206558726 t-
i Rhinopithecus_roxellana.NC_044549.1                   I 6 I 1
s Rhinopithecus_strykeri.ctg4                            44856413 1 -  45163003 T-
i Rhinopithecus_strykeri.ctg4                           I 6 I 1
s Saiga_tatarica.SaiTat_scaffold_82192                       7705 1 +     12214 A-
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 I 1
s Saimiri_boliviensis.NW_024100938.1                     15672586 1 -  43202129 t-
i Saimiri_boliviensis.NW_024100938.1                    I 2 I 1
s Saimiri_cassiquiarensis.k141_808270                        4503 1 +     34089 T-
i Saimiri_cassiquiarensis.k141_808270                   I 2 I 1
s Saimiri_macrodon.k141_2087127                              4444 1 -     60842 T-
i Saimiri_macrodon.k141_2087127                         I 2 I 1
s Saimiri_oerstedii.k141_841116                              4539 1 +     67014 T-
i Saimiri_oerstedii.k141_841116                         I 2 I 1
s Saimiri_sciureus.k141_1947592                              4517 1 +     60816 T-
i Saimiri_sciureus.k141_1947592                         I 2 I 1
s Saimiri_ustus.k141_1282476                                 4454 1 -     76454 T-
i Saimiri_ustus.k141_1282476                            I 2 I 1
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   32060 1 -    114521 T-
i Scalopus_aquaticus.ScaAqu_scaffold_9300               I 14 I 1
s Semnopithecus_entellus.k141_1572367                        3235 1 +     15331 T-
i Semnopithecus_entellus.k141_1572367                   I 4 I 1
s Semnopithecus_hypoleucos.k141_761524                       8632 1 +     20762 T-
i Semnopithecus_hypoleucos.k141_761524                  I 4 I 1
s Semnopithecus_johnii.k141_785014                         118634 1 +    130994 T-
i Semnopithecus_johnii.k141_785014                      I 4 I 1
s Semnopithecus_priam.k141_410937                           37421 1 +     46263 T-
i Semnopithecus_priam.k141_410937                       I 4 I 1
s Semnopithecus_schistaceus.k141_387461                     30535 1 +     42640 T-
i Semnopithecus_schistaceus.k141_387461                 I 4 I 1
s Semnopithecus_vetulus.k141_1143185                        13579 1 +     30600 T-
i Semnopithecus_vetulus.k141_1143185                    I 4 I 1
s Sigmodon_hispidus.SigHis_scaffold_11332                  100095 1 -    120886 G-
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            18635 1 +    739146 A-
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 I 1
s Spermophilus_dauricus.KZ294190.1                        2239554 1 +   2842873 a-
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             234558 1 -    276980 T-
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 I 2
s Suricata_suricatta.SurSur_flattened_line_20339            27350 1 +     62062 A-
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 I 1
s Sus_scrofa.CM000824.4                                 189271618 1 + 218635234 a-
i Sus_scrofa.CM000824.4                                 C 0 I 1
s Symphalangus_syndactylus.tarseq_24                        14790 1 -  13920577 T-
i Symphalangus_syndactylus.tarseq_24                    C 0 I 1
s Tadarida_brasiliensis.TadBra_scaffold_145589               6034 1 -      6213 A-
i Tadarida_brasiliensis.TadBra_scaffold_145589          I 259 I 1
s Tamandua_tetradactyla.TamTet_scaffold_26877               14479 1 +     45698 A-
i Tamandua_tetradactyla.TamTet_scaffold_26877           I 6 C 0
s Tapirus_indicus.TapInd_scaffold_176                      806895 1 +   1148477 A-
i Tapirus_indicus.TapInd_scaffold_176                   C 0 I 1
s Tapirus_terrestris.TapTer_scaffold_14939                  57590 1 +     99546 A-
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 I 1
s Theropithecus_gelada.CM009951.1                       194007634 1 - 194193292 t-
i Theropithecus_gelada.CM009951.1                       I 2 I 1
s Tolypeutes_matacus.TolMat_scaffold_269431                  5311 1 +      6782 A-
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Trachypithecus_auratus.k141_738098                        26740 1 +     38948 T-
i Trachypithecus_auratus.k141_738098                    I 4 I 1
s Trachypithecus_crepusculus.k141_1588528                   20471 1 -     32910 T-
i Trachypithecus_crepusculus.k141_1588528               I 6 I 1
s Trachypithecus_cristatus.k141_1011511                      1857 1 -     12939 T-
i Trachypithecus_cristatus.k141_1011511                 I 4 I 2
s Trachypithecus_francoisi.k141_768164                       1793 1 -     14244 T-
i Trachypithecus_francoisi.k141_768164                  I 6 I 1
s Trachypithecus_geei.k141_670367                           43190 1 -     54611 T-
i Trachypithecus_geei.k141_670367                       I 5 I 1
s Trachypithecus_germaini.k141_868450                         998 1 -     11566 T-
i Trachypithecus_germaini.k141_868450                   I 6 I 1
s Trachypithecus_hatinhensis.k141_504423                     3170 1 -     15592 T-
i Trachypithecus_hatinhensis.k141_504423                I 6 I 1
s Trachypithecus_laotum.k141_760702                          1827 1 +     14371 T-
i Trachypithecus_laotum.k141_760702                     I 6 I 1
s Trachypithecus_leucocephalus.k141_381681                    109 1 +     12481 T-
i Trachypithecus_leucocephalus.k141_381681              I 6 I 1
s Trachypithecus_obscurus.k141_1115109                       5230 1 -     28054 T-
i Trachypithecus_obscurus.k141_1115109                  I 6 I 1
s Trachypithecus_phayrei.ctg3                            44660030 1 -  44834318 T-
i Trachypithecus_phayrei.ctg3                           I 6 I 1
s Trachypithecus_pileatus.k141_1022309                       2333 1 +     13828 T-
i Trachypithecus_pileatus.k141_1022309                  I 5 I 1
s Tragulus_javanicus.TraJav_scaffold_14717                   4932 1 +     90398 A-
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 I 1
s Trichechus_manatus.JH594618.1                          16084657 1 +  31416278 a-
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2792678 1 -   3938065 a-
i Tupaia_chinensis.KB320831.1                           C 0 I 1
s Tupaia_tana.TupTan_flattened_line_68454                    4891 1 +     13056 A-
i Tupaia_tana.TupTan_flattened_line_68454               C 0 I 1
s Tursiops_truncatus.MRVK01000923.1                      69313186 1 -  96451834 g-
i Tursiops_truncatus.MRVK01000923.1                     C 0 I 2
s Uropsilus_gracilis.UroGra_scaffold_69449                   1093 1 +     10241 T-
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 I 1
s Ursus_maritimus.KK498671.1                              6514575 1 +  28682327 t-
i Ursus_maritimus.KK498671.1                            C 0 I 3
s Varecia_rubra.k141_432109                                  5104 1 -     20643 G-
i Varecia_rubra.k141_432109                             I 1 I 1
s Varecia_variegata.k141_775891                             24645 1 -     33872 G-
i Varecia_variegata.k141_775891                         I 1 I 1
s Vicugna_pacos.KN269600.1                                1524431 1 -   2331223 a-
i Vicugna_pacos.KN269600.1                              C 0 I 8
s Vulpes_lagopus.VulLag_flattened_line_2045                138082 1 -    281493 A-
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 I 1
s Xerus_inauris.XerIna_scaffold_7898                       126662 1 -    134049 A-
i Xerus_inauris.XerIna_scaffold_7898                    C 0 I 1
s Zalophus_californianus.ZalCal_flattened_line_4097        214052 1 -    227762 T-
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 I 3
s Zapus_hudsonius.ZapHud_scaffold_64392                     14770 1 -     20485 T-
i Zapus_hudsonius.ZapHud_scaffold_64392                 I 8 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           6686 1 -      8775 G-
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 I 2
e Eptesicus_fuscus.JH977687.1                             4703942 0 +   6522550 C
e Macroglossus_sobrinus.MacSob_scaffold_879                701370 0 +    802869 C
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             38964 0 -     47444 C
e Sorex_araneus.JH798170.1                               17750754 3364 -  27805282 I
e Erinaceus_europaeus.JH835290.1                         11534163 4 +  16010500 I
e Oryctolagus_cuniculus.CM000803.1                      141876069 1 + 163896628 I
e Ochotona_princeps.JH802095.1                            4995784 6 -  23139505 I
e Lepus_americanus.LepAme_scaffold_62849                    13021 15 +     22452 I
e Tonatia_saurophila.TonSau_scaffold_3334                  135629 0 -    259118 C
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                19076 0 +    109198 C
e Rhinolophus_sinicus.LVEH01000179.1                      1787585 1 +   2252614 I
e Pteropus_vampyrus.KN525959.1                             603701 0 -   3946241 C
e Pteropus_alecto.KB031157.1                             13245751 0 -  17261082 C
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            97242 0 +    112873 C
e Myotis_myotis.MyoMyo_scaffold_6123                        10418 0 +     66751 C
e Myotis_lucifugus.GL429887.1                             3465205 0 -   3747815 C
e Myotis_davidii.KB114863.1                               5019300 0 +   6462685 C
e Myotis_brandtii.KE161952.1                               967623 0 +   8389877 C
e Murina_feae.MurFea_scaffold_2254                          19313 0 -    100666 C
e Miniopterus_schreibersii.MinSch_scaffold_24116            34118 0 +     45743 C
e Miniopterus_natalensis.LDJU01000022.1                   8209464 0 +  10048721 C
e Micronycteris_hirsuta.MicHir_scaffold_37978               22468 2 -     32043 I
e Megaderma_lyra.MegLyr_scaffold_3562                       64187 1 -    234502 I
e Lasiurus_borealis.LasBor_scaffold_5102                   114032 0 -    115756 C
e Hipposideros_galeritus.HipGal_scaffold_104691              7309 1 -      9143 I
e Hipposideros_armiger.JXIK01001085.1                      278164 1 -    477199 I
e Eidolon_helvum.KE772537.1                                 11997 0 +     24177 C
e Craseonycteris_thonglongyai.CraTho_scaffold_22679         39468 1 -     40477 I
e Carollia_perspicillata.CarPer_scaffold_4436               59289 0 +     67245 C
e Artibeus_jamaicensis.ArtJam_scaffold_41619                 8495 0 -     29036 C
e Antilocapra_americana.AntAmePen_scaffold_42841            30463 1 +     33004 I
e Anoura_caudifer.AnoCau_scaffold_422                      390087 0 -    631301 C
e Hylobates_pileatus_a.tarseq_592                             33391 319 -     60944 I
e Tarsius_wallacei.k141_48636                               59629 1 +     65473 I
e Tarsius_lariang.k141_609102                               26313 1 +     42269 I
e Sapajus_macrocephalus.k141_966464                         20536 0 -     62485 C
e Sapajus_apella.ctg10                                   17341177 0 -  30362882 C
e Propithecus_verreauxi.k141_158021                         39012 7 -     48185 I
e Propithecus_tattersalli.k141_907138                       16747 7 -     53241 I
e Propithecus_perrieri.k141_7554                            17112 4 +     27322 I
e Propithecus_edwardsi.k141_1317105                         35187 4 -     44753 I
e Propithecus_diadema.k141_577245                           42801 4 +     52369 I
e Propithecus_coronatus.k141_1353159                         3459 7 +     11805 I
e Propithecus_coquerelli.NW_012147997.1                    667273 6500 -   2312742 I
e Pithecia_pissinattii.k141_1102319                          5376 0 +      9673 C
e Macaca_mulatta.NC_041755.1                            196035432 3 + 196197964 I
e Macaca_cyclopis.k119_893486                                2000 3 -      3136 I
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I
e Eulemur_fulvus.k141_653297                                11088 7 +    109717 I
e Chiropotes_sagulatus.k141_773804                          15167 1 +     40510 I
e Chiropotes_israelita.k141_1189915                         70987 1 +    196370 I
e Cephalopachus_bancanus.k141_702587                         7865 1 +     21754 I
e Cebus_unicolor.k141_239009                                12417 0 +     25043 C
e Cebus_olivaceus.k141_93739                                 8177 0 -     26817 C
e Cebus_albifrons.Contig22                               18890633 0 -  29618158 C
e Carlito_syrichta.NW_007248099.1                          308830 1 +    345090 I
e Cacajao_melanocephalus.k141_1160263                        7397 1 -    134917 I
e Cacajao_hosomi.k141_303789                                14854 1 -    216513 I
e Cacajao_calvus.k141_96166                                 12812 1 +    125063 I
e Cacajao_ayresi.k141_724503                               113781 1 -    171031 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               11636 2 +    209709 T-----T
s Acinonyx_jubatus.LLWD01000356.1                         2033754 1 +   3721120 ------t
i Acinonyx_jubatus.LLWD01000356.1                       I 1 I 2
s Acomys_cahirinus.AcoCah_scaffold_1625                    112380 1 -    189883 ------T
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7094432 1 -  16596857 ------t
i Ailurus_fulgens.LNAC01000003.1                        I 1 I 3
s Allactaga_bullata.AllBul_scaffold_70162                   16668 1 -     22067 ------A
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   1130 1 -     60446 ------T
i Allenopithecus_nigroviridis.k141_2469532              I 2 C 0
s Allochrocebus_lhoesti.k141_3566948                         1852 1 -     29318 T------
i Allochrocebus_lhoesti.k141_3566948                    I 1 C 0
s Allochrocebus_preussi.k141_1108977                          787 1 +     38766 T------
i Allochrocebus_preussi.k141_1108977                    I 1 C 0
s Allochrocebus_solatus.k141_371672                          1746 1 -     80423 T------
i Allochrocebus_solatus.k141_371672                     I 1 C 0
s Alouatta_belzebul.k141_1818029                            10042 2 -     18050 T-----T
i Alouatta_belzebul.k141_1818029                        I 1 C 0
s Alouatta_caraya.k141_5460                                 11135 2 -     11521 T-----T
i Alouatta_caraya.k141_5460                             I 1 C 0
s Alouatta_discolor.k141_811576                             10719 2 -     21359 T-----T
i Alouatta_discolor.k141_811576                         I 1 C 0
s Alouatta_juara.k141_1244470                                 334 2 +      2129 T-----T
i Alouatta_juara.k141_1244470                           I 1 C 0
s Alouatta_macconnelli.k141_1331706                         10018 2 -     10438 T-----T
i Alouatta_macconnelli.k141_1331706                     I 1 C 0
s Alouatta_nigerrima.k141_2718643                            6674 2 +      7047 T-----T
i Alouatta_nigerrima.k141_2718643                       I 1 C 0
s Alouatta_palliata.k141_1316127                             9953 2 +     10410 T-----T
i Alouatta_palliata.k141_1316127                        I 1 C 0
s Alouatta_puruensis.k141_1284840                            3762 2 -      4927 T-----T
i Alouatta_puruensis.k141_1284840                       I 1 C 0
s Ammotragus_lervia.NIVO01013474.1                        3519879 1 +   4113121 ------a
i Ammotragus_lervia.NIVO01013474.1                      I 1 I 3
s Antilocapra_americana.AntAmePen_scaffold_42841            30464 1 +     33004 ------T
i Antilocapra_americana.AntAmePen_scaffold_42841        I 1 I 3
s Aotus_azarae.k141_3170768                                 62402 2 +     78111 T-----T
i Aotus_azarae.k141_3170768                             I 1 C 0
s Aotus_nancymaae.KZ196176.1                              5749301 2 +   9889416 t-----t
i Aotus_nancymaae.KZ196176.1                            I 1 C 0
s Aotus_trivirgatus.k141_1740727                             5887 2 -    104377 T-----T
i Aotus_trivirgatus.k141_1740727                        I 1 C 0
s Aotus_vociferans.k141_718647                               5889 2 +     23246 T-----T
i Aotus_vociferans.k141_718647                          I 1 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     3476 1 +      5067 ------T
i Aplodontia_rufa.AprRuf_scaffold_156013                I 1 C 0
s Arctocebus_calabarensis.k141_587554                         822 2 +      9265 A-----A
i Arctocebus_calabarensis.k141_587554                   I 1 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9539149 2 +  39197703 T-----T
i Ateles_geoffroyi_b.tarseq_2582                           I 1 C 0
s Ateles_belzebuth.k141_1348307                             60422 2 +     85812 T-----T
i Ateles_belzebuth.k141_1348307                         I 1 C 0
s Ateles_chamek.k141_1072810                                11434 2 +     89302 T-----T
i Ateles_chamek.k141_1072810                            I 1 C 0
s Ateles_geoffroyi_a.k141_1300742                             15937 2 -     58268 T-----T
i Ateles_geoffroyi_a.k141_1300742                         I 1 C 0
s Ateles_marginatus.k141_899112                             63929 2 +    119057 T-----T
i Ateles_marginatus.k141_899112                         I 1 C 0
s Ateles_paniscus.k141_1631200                               5899 2 -     25888 T-----T
i Ateles_paniscus.k141_1631200                          I 1 C 0
s Avahi_laniger.k141_2840928                                 6550 2 -     16375 T-----T
i Avahi_laniger.k141_2840928                            I 8 C 0
s Avahi_peyrierasi.k141_798820                                170 2 +      6337 T-----T
i Avahi_peyrierasi.k141_798820                          I 8 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26379964 1 +  51448160 ------T
i Balaenoptera_acutorostrata.KI537095.1                 I 2 I 2
s Balaenoptera_bonaerensis.DF502048.1                        5133 1 -     13118 ------T
i Balaenoptera_bonaerensis.DF502048.1                   I 2 I 2
s Beatragus_hunteri.BeaHun_scaffold_21644                   42947 1 -     72089 ------A
i Beatragus_hunteri.BeaHun_scaffold_21644               I 1 I 3
s Bison_bison.KN264915.1                                  6559620 1 +   6870073 ------a
i Bison_bison.KN264915.1                                I 1 I 3
s Bos_indicus.CM003021.1                                138139724 1 - 161108492 ------a
i Bos_indicus.CM003021.1                                I 1 I 3
s Bos_mutus.JH883513.1                                     572262 1 -    998990 ------a
i Bos_mutus.JH883513.1                                  I 1 I 3
s Bos_taurus.CM000177.6                                 136295457 1 - 158972876 ------a
i Bos_taurus.CM000177.6                                 I 1 I 3
s Bubalus_bubalis.KI419065.1                              1232540 1 -   1914593 ------a
i Bubalus_bubalis.KI419065.1                            I 1 I 3
s Cacajao_ayresi.k141_724503                               113782 1 -    171031 ------T
i Cacajao_ayresi.k141_724503                            I 1 C 0
s Cacajao_calvus.k141_96166                                 12813 1 +    125063 ------T
i Cacajao_calvus.k141_96166                             I 1 C 0
s Cacajao_hosomi.k141_303789                                14855 1 -    216513 ------T
i Cacajao_hosomi.k141_303789                            I 1 C 0
s Cacajao_melanocephalus.k141_1160263                        7398 1 -    134917 ------T
i Cacajao_melanocephalus.k141_1160263                   I 1 C 0
s Camelus_bactrianus.KN276303.1                           3219335 1 -   8989139 ------t
i Camelus_bactrianus.KN276303.1                         I 7 I 2
s Camelus_dromedarius.KN271192.1                           397037 1 -  15254737 ------t
i Camelus_dromedarius.KN271192.1                        I 7 I 2
s Camelus_ferus.KB016973.1                                2972772 1 +   6889770 ------t
i Camelus_ferus.KB016973.1                              I 7 I 2
s CanFam4.chr31                                          11519248 1 +  39901454 ------T
i CanFam4.chr31                                         I 1 I 3
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   14273 1 +     87036 ------T
i Canis_lupus_VD.CanFam_VD_scaffold_16982               I 1 I 3
s Canis_lupus_dingo.QKWQ01001993.1                       11265915 1 -  35597290 ------t
i Canis_lupus_dingo.QKWQ01001993.1                      I 1 I 3
s Canis_lupus_familiaris.chr31                           11088449 1 +  39895921 ------t
i Canis_lupus_familiaris.chr31                          I 1 I 3
s Canis_lupus_orion.HG994411.1                           16455464 1 -  44759192 ------t
i Canis_lupus_orion.HG994411.1                          I 1 I 3
s Capra_aegagrus.CM003214.1                              21324955 1 + 157394656 ------a
i Capra_aegagrus.CM003214.1                             I 1 I 3
s Capra_hircus.CM004562.1                               135706182 1 - 157403528 ------a
i Capra_hircus.CM004562.1                               I 1 I 3
s Carlito_syrichta.NW_007248099.1                          308831 2 +    345090 A-----T
i Carlito_syrichta.NW_007248099.1                       I 1 C 0
s Castor_canadensis.CasCan_scaffold_47037                   30494 2 +     33760 T-----T
i Castor_canadensis.CasCan_scaffold_47037               I 1 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   158644 1 -    276539 ------T
i Catagonus_wagneri.CatWag_scaffold_1305                I 1 I 2
s Cavia_aperea.AVPZ01000278.1                            15786360 2 -  24422027 t-----t
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15798295 3 -  24440124 t----tt
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       176486 3 +    436027 TT----T
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18890633 2 -  29618158 T-----T
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 8177 2 -     26817 T-----T
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                12417 2 +     25043 T-----T
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         7866 2 +     21754 A-----T
i Cephalopachus_bancanus.k141_702587                    I 1 C 0
s Ceratotherium_simum.JH767818.1                          4363642 1 +   7569818 ------t
i Ceratotherium_simum.JH767818.1                        I 1 I 2
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         3399 1 -      9338 ------T
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    I 1 I 2
s Cercocebus_atys.KQ010443.1                              6555074 1 +   6739814 t------
i Cercocebus_atys.KQ010443.1                            I 1 C 0
s Cercocebus_chrysogaster.k141_2328246                      26551 1 +     60454 T------
i Cercocebus_chrysogaster.k141_2328246                  I 1 C 0
s Cercocebus_lunulatus.k141_4634644                          1756 1 -     21101 T------
i Cercocebus_lunulatus.k141_4634644                     I 1 C 0
s Cercocebus_torquatus.k141_3969582                         59066 1 -    107033 T------
i Cercocebus_torquatus.k141_3969582                     I 1 C 0
s Cercopithecus_ascanius.k141_4123525                        1956 2 -     17608 T-----T
i Cercopithecus_ascanius.k141_4123525                   I 1 C 0
s Cercopithecus_cephus.k141_598190                          29451 2 +     30494 T-----T
i Cercopithecus_cephus.k141_598190                      I 1 C 0
s Cercopithecus_diana.k141_2980617                          58297 2 -     59240 T-----T
i Cercopithecus_diana.k141_2980617                      I 1 C 0
s Cercopithecus_hamlyni.k141_129805                          1998 2 +     16677 T-----T
i Cercopithecus_hamlyni.k141_129805                     I 1 C 0
s Cercopithecus_lowei.k141_623764                           24156 3 +     35983 TT----T
i Cercopithecus_lowei.k141_623764                       I 1 C 0
s Cercopithecus_albogularis.ctg51                              11990684 2 +  12117833 T-----T
i Cercopithecus_albogularis.ctg51                             I 1 C 0
s Cercopithecus_mona.ctg12                               46477442 3 +  46592721 TT----T
i Cercopithecus_mona.ctg12                              I 1 C 0
s Cercopithecus_neglectus.k141_2078027                      40993 3 -     45581 TT----T
i Cercopithecus_neglectus.k141_2078027                  I 1 C 0
s Cercopithecus_nictitans.k141_1129315                       1999 2 +     35577 T-----T
i Cercopithecus_nictitans.k141_1129315                  I 1 C 0
s Cercopithecus_petaurista.k141_64532                        1775 2 -     25661 T-----T
i Cercopithecus_petaurista.k141_64532                   I 1 C 0
s Cercopithecus_pogonias.k141_3109732                        1753 3 -     17744 TT----T
i Cercopithecus_pogonias.k141_3109732                   I 1 C 0
s Cercopithecus_roloway.k141_2263608                        21369 3 +     37128 TT----T
i Cercopithecus_roloway.k141_2263608                    I 1 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           2556 2 -      6963 T-----T
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           58834 2 -     68416 T-----T
i Cheirogaleus_major.k141_1157592                       I 5 C 0
s Cheirogaleus_medius.k141_133808                            7878 2 +     13308 T-----T
i Cheirogaleus_medius.k141_133808                       I 5 C 0
s Cheracebus_lucifer.k141_619653                             5439 2 -     18223 T-----T
i Cheracebus_lucifer.k141_619653                        I 1 C 0
s Cheracebus_lugens.k141_203936                             22460 2 +     25473 T-----A
i Cheracebus_lugens.k141_203936                         I 1 C 0
s Cheracebus_regulus.k141_2128895                           41497 2 +     57117 T-----T
i Cheracebus_regulus.k141_2128895                       I 1 C 0
s Cheracebus_torquatus.k141_315545                          46176 2 +     54541 T-----T
i Cheracebus_torquatus.k141_315545                      I 1 C 0
s Chinchilla_lanigera.JH721867.1                         15961529 2 +  43084221 t-----t
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         70988 1 +    196370 ------T
i Chiropotes_israelita.k141_1189915                     I 1 C 0
s Chiropotes_sagulatus.k141_773804                          15168 1 +     40510 ------T
i Chiropotes_sagulatus.k141_773804                      I 1 C 0
s Chlorocebus_aethiops.ctg22                             15138920 2 -  15256731 T-----T
i Chlorocebus_aethiops.ctg22                            I 1 C 0
s Chlorocebus_pygerythrus.k141_1486215                      33968 2 -     53260 T-----T
i Chlorocebus_pygerythrus.k141_1486215                  I 1 C 0
s Chlorocebus_sabaeus.CM001963.2                        101144528 2 + 101219884 t-----t
i Chlorocebus_sabaeus.CM001963.2                        I 1 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                16252 2 -     21363 T-----T
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           761559 2 +    964067 t-----t
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_3549804              175 2 -       354 T-----T
i Chrysochloris_asiatica.ChrAsi_scaffold_3549804        C 0 C 0
s Colobus_angolensis.KN985967.1                          10886299 2 +  10971483 t-----t
i Colobus_angolensis.KN985967.1                         I 1 C 0
s Colobus_guereza.LG08                                  147664465 2 + 156195979 T-----T
i Colobus_guereza.LG08                                  I 1 C 0
s Colobus_polykomos.k141_1406057                            16450 2 +     23629 T-----T
i Colobus_polykomos.k141_1406057                        I 1 C 0
s Condylura_cristata.JH655880.1                          60613373 1 +  78930452 ------t
i Condylura_cristata.JH655880.1                         I 1 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 278330 1 -    399297 ------T
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53029013 1 +  72327488 ------T
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_88140              1932 1 +     11655 ------T
i Crocidura_indochinensis.CroInd_scaffold_88140         I 1 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            51788 1 -     70449 ------A
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 1 I 2
s Ctenodactylus_gundi.CteGun_scaffold_447                  207924 2 -    956709 T-----T
i Ctenodactylus_gundi.CteGun_scaffold_447               I 1 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 30504 2 -     67205 G-----T
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                17545 3 +     26546 TT----T
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             58636 2 -    236241 T-----T
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 I 1
s Dasypus_novemcinctus.JH568778.1                          183443 2 -   6883506 T-----C
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16844689 2 +  31942871 T-----T
i Daubentonia_madagascariensis.ctg11                    I 1 C 0
s Delphinapterus_leucas.KZ290064.1                       80036587 1 -  96802777 ------t
i Delphinapterus_leucas.KZ290064.1                      I 2 I 2
s Dicerorhinus_sumatrensis.PEKH010003161.1                 322291 1 +    993696 ------t
i Dicerorhinus_sumatrensis.PEKH010003161.1              I 1 I 2
s Diceros_bicornis.DicBicMic_scaffold_9545                   2944 1 +    151128 ------T
i Diceros_bicornis.DicBicMic_scaffold_9545              I 1 I 2
s Dinomys_branickii.DinBra_scaffold_1996                   156782 2 +    228994 T-----T
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3656100 2 +   4240102 T-----T
i Dipodomys_ordii.KN672545.1                            I 1 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 27733 2 +     28912 T-----T
i Dipodomys_stephensi.DipSte_scaffold_44365             I 1 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                35886 2 -     73477 T-----T
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22998298 2 -  44670279 T-----T
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1491232 1 +   1727528 ------t
i Elaphurus_davidianus.JRFZ01086400.1                   I 1 I 3
s Elephantulus_edwardii.JH947210.1                        7815709 2 +  15467074 T-----T
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        239560 1 -    369425 ------G
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           6673 1 -      7838 ------G
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85871952 1 +  99434291 ------t
i Enhydra_lutris.KZ291749.1                             I 1 I 5
s Eptesicus_fuscus.JH977687.1                             4703942 1 +   6522550 ------t
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5852743 1 -   7175178 ------T
i Equus_asinus.JREZ01000062.1                           I 1 I 2
s Equus_caballus.CM000402.2                              13351246 1 +  41866177 ------T
i Equus_caballus.CM000402.2                             I 1 I 2
s Equus_przewalskii.ATBW01073585.1                          12736 1 +     92910 ------t
i Equus_przewalskii.ATBW01073585.1                      I 1 I 2
s Erythrocebus_patas.Contig8                             48771095 2 -  48907691 T-----T
i Erythrocebus_patas.Contig8                            I 1 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          314803 1 +    330699 ------T
i Eschrichtius_robustus.EscRob_flattened_line_685       I 2 I 2
s Eubalaena_japonica.EubJap_flattened_line_7756             61255 1 +     89355 ------T
i Eubalaena_japonica.EubJap_flattened_line_7756         I 2 I 2
s Eulemur_albifrons.k141_715837                              4890 2 +     13586 T-----T
i Eulemur_albifrons.k141_715837                         I 6 C 0
s Eulemur_collaris.k141_311830                               4821 2 -      6809 T-----T
i Eulemur_collaris.k141_311830                          I 4 C 0
s Eulemur_coronatus.k141_3240342                            11296 2 +     36558 T-----T
i Eulemur_coronatus.k141_3240342                        I 6 I 2
s Eulemur_flavifrons.k141_903901                             7618 2 +     60246 T-----T
i Eulemur_flavifrons.k141_903901                        I 6 I 1
s Eulemur_fulvus.k141_653297                                11095 2 +    109717 T-----T
i Eulemur_fulvus.k141_653297                            I 7 C 0
s Eulemur_macaco.k141_1341545                               15480 2 +     16540 T-----T
i Eulemur_macaco.k141_1341545                           I 6 I 1
s Eulemur_mongoz.k141_825972                                15754 2 +     27497 T-----T
i Eulemur_mongoz.k141_825972                            I 6 I 2
s Eulemur_rubriventer.k141_411740                           18213 2 +     26808 T-----T
i Eulemur_rubriventer.k141_411740                       I 9 C 0
s Eulemur_rufus.k141_1620292                                32947 2 +     46535 T-----T
i Eulemur_rufus.k141_1620292                            I 6 C 0
s Eulemur_sanfordi.k141_186399                              15668 2 -     29447 T-----T
i Eulemur_sanfordi.k141_186399                          I 6 I 7
s Felis_catus.CM001386.2                                129892713 1 - 159252932 ------t
i Felis_catus.CM001386.2                                I 1 I 2
s Felis_catus_fca126.CM031420.1                         129279800 1 - 158578461 ------t
i Felis_catus_fca126.CM031420.1                         I 1 I 2
s Felis_nigripes.FelNig_flattened_line_8080                 20945 1 +     52776 ------T
i Felis_nigripes.FelNig_flattened_line_8080             I 1 I 2
s Galago_moholi.ctg555                                     210716 2 -    847004 T-----T
i Galago_moholi.ctg555                                  I 1 C 0
s Galago_senegalensis.k141_964197                           13091 2 -     43889 T-----T
i Galago_senegalensis.k141_964197                       I 1 C 0
s Galagoides_demidoff.k141_1769638                          10163 2 +     27357 T-----T
i Galagoides_demidoff.k141_1769638                      I 1 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               156066 2 +    324696 A-----A
i Galeopterus_variegatus.GalVar_scaffold_354            I 1 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    181033 1 -    189561 ------a
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 1 I 2
s Glis_glis.GliGli_scaffold_79770                           12861 1 -     18683 ------T
i Glis_glis.GliGli_scaffold_79770                       I 1 C 0
s Gorilla_beringei.k141_111300                               5154 2 -     14630 T-----T
i Gorilla_beringei.k141_111300                          I 1 C 0
s Gorilla_gorilla.LT578340.1                            119652253 2 - 195582420 T-----T
i Gorilla_gorilla.LT578340.1                            I 1 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   77406 1 +    118900 ------T
i Graphiurus_murinus.GraMur_scaffold_4493               I 1 C 0
s Hapalemur_alaotrensis.k141_1280836                         1667 2 +     10286 T-----T
i Hapalemur_alaotrensis.k141_1280836                    I 6 C 0
s Hapalemur_gilberti.k141_279011                              144 2 -     11661 T-----T
i Hapalemur_gilberti.k141_279011                        I 6 C 0
s Hapalemur_griseus.k141_1387522                             5473 2 +     56096 T-----T
i Hapalemur_griseus.k141_1387522                        I 6 C 0
s Hapalemur_meridionalis.k141_186231                        28723 2 -     42470 T-----T
i Hapalemur_meridionalis.k141_186231                    I 6 C 0
s Hapalemur_occidentalis.k141_797938                        45346 2 -     54384 T-----T
i Hapalemur_occidentalis.k141_797938                    I 6 C 0
s Helogale_parvula.HelPar_flattened_line_22962              16995 1 +     53719 ------A
i Helogale_parvula.HelPar_flattened_line_22962          I 1 I 2
s Hemitragus_hylocrius.HemHyl_scaffold_16669                27225 1 -     91191 ------A
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 I 3
s Heterocephalus_glaber.JH602058.1                        2550867 2 +  31725842 G-----T
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               60421 2 +     73687 T-----T
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              146881 1 +    277961 ------T
i Hippopotamus_amphibius.HipAmp_scaffold_1308           I 1 I 2
s Hoolock_leuconedys.ctg79                                      4561 2 -   7690867 T-----T
i Hoolock_leuconedys.ctg79                                 I 1 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 17065 1 -     67322 ------T
i Hyaena_hyaena.HyaHya_flattened_line_20729             I 1 I 2
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           18748 2 -    119109 T-----T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              4984 2 +      5897 T-----T
i Hylobates_abbotti.k141_493872                         I 1 C 0
s Hylobates_agilis.k141_624065                               1850 2 +      2112 T-----T
i Hylobates_agilis.k141_624065                          I 1 C 0
s Hylobates_klossii.k141_285563                                29 2 +      1026 T-----T
i Hylobates_klossii.k141_285563                         I 1 C 0
s Hylobates_pileatus_b.ContigUN                                 14624531 2 -  25970782 T-----T
i Hylobates_pileatus_b.ContigUN                                I 1 C 0
s Hylobates_muelleri.k141_1389047                            1786 2 -      2977 T-----T
i Hylobates_muelleri.k141_1389047                       I 1 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     5926 2 +     22540 T-----T
i Hystrix_cristata.HysCri_scaffold_50788                I 2 C 0
s Indri_indri.k141_4418183                                   1317 2 -      1457 T-----T
i Indri_indri.k141_4418183                              I 8 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               8792 1 +     17520 ------T
i Inia_geoffrensis.IniGeo_flattened_line_66725          I 2 I 2
s Jaculus_jaculus.JH725517.1                              8565677 1 +  11848649 ------a
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               23410 1 +     37189 ------T
i Kogia_breviceps.KogBre_flattened_line_35920           I 2 I 2
s Lagothrix_lagothricha.k141_12968                          50020 2 -    147782 T-----T
i Lagothrix_lagothricha.k141_12968                      I 1 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   114032 1 -    115756 ------T
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258407028 2 - 285822530 T-----T
i Lemur_catta.scaffold_1                                I 6 C 0
s Lepilemur_ankaranensis.k141_884009                        23775 2 +     39228 T-----T
i Lepilemur_ankaranensis.k141_884009                    I 3 C 0
s Lepilemur_dorsalis.k141_134267                            53159 2 +     63517 T-----T
i Lepilemur_dorsalis.k141_134267                        I 3 C 0
s Lepilemur_ruficaudatus.k141_617879                        78418 2 +    116806 T-----T
i Lepilemur_ruficaudatus.k141_617879                    I 3 C 0
s Lepilemur_septentrionalis.k141_578524                     31414 2 -     33031 T-----T
i Lepilemur_septentrionalis.k141_578524                 I 3 C 0
s Leptonychotes_weddellii.KB714749.1                      3085758 1 -   3498232 ------t
i Leptonychotes_weddellii.KB714749.1                    I 1 I 3
s Lepus_americanus.LepAme_scaffold_62849                    13036 2 +     22452 T-----T
i Lepus_americanus.LepAme_scaffold_62849                I 15 C 0
s Lipotes_vexillifer.KE558548.1                            135748 1 +   3060487 ------t
i Lipotes_vexillifer.KE558548.1                         I 2 I 2
s Lophocebus_aterrimus.ctg55                             19248163 6 +  19376315 TTTTT-T
i Lophocebus_aterrimus.ctg55                            I 1 C 0
s Loris_lydekkerianus.k141_550999                           10475 2 +     84689 A-----T
i Loris_lydekkerianus.k141_550999                       I 1 C 0
s Loris_tardigradus.ctg97                                 3778225 2 +   6799190 A-----T
i Loris_tardigradus.ctg97                               I 1 C 0
s Loxodonta_africana.GL010040.1                          20594002 2 -  62548349 t-----t
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11087905 1 +  39895028 ------t
i Lycaon_pictus.CM007556.1                              I 1 I 3
s Manis_javanica.JSZB01003966.1                            145396 1 +    252755 ------t
i Manis_javanica.JSZB01003966.1                         I 1 I 2
s Manis_pentadactyla.KN017078.1                             35473 1 +     58827 ------t
i Manis_pentadactyla.KN017078.1                         I 1 I 2
s Mellivora_capensis.MelCap_flattened_line_15433              761 1 -     87323 ------T
i Mellivora_capensis.MelCap_flattened_line_15433        I 1 I 4
s Meriones_unguiculatus.MerUng_scaffold_52233               12525 1 +     15977 ------T
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1046722 1 -  26018355 ------T
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_227248                     82 1 -      1377 ------T
i Mesoplodon_bidens.MesBid_scaffold_227248              I 2 I 2
s Macaca_arctoides.k141_2201161                             19904 1 +     74745 T------
i Macaca_arctoides.k141_2201161                         I 1 C 0
s Macaca_assamensis.Contig65                             12706360 1 +  12821369 T------
i Macaca_assamensis.Contig65                            I 3 C 0
s Macaca_fuscata.k119_599327                                 1525 1 -      2568 T------
i Macaca_fuscata.k119_599327                            I 1 C 0
s Macaca_radiata.k141_3680256                                1948 1 -     13212 T------
i Macaca_radiata.k141_3680256                           I 1 C 0
s Macaca_thibetana.k99_662710                               16913 1 -     24607 T------
i Macaca_thibetana.k99_662710                           I 1 C 0
s Mandrillus_leucophaeus.scaffold125                     43437322 1 -  43563597 T------
i Mandrillus_leucophaeus.scaffold125                    I 1 I 6
s Mandrillus_sphinx.Contig144                             4450148 1 -   4543643 T------
i Mandrillus_sphinx.Contig144                           I 1 C 0
s Microcebus_murinus.CM007691.1                          16510047 1 +  47401472 t------
i Microcebus_murinus.CM007691.1                         I 5 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  34275 2 -     48017 C-----T
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22819859 1 -  98408828 ------g
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8209464 1 +  10048721 ------t
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            34118 1 +     45743 ------T
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         1875 3 +     29742 TT----T
i Miopithecus_ogouensis.k141_2935907                    I 1 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        11271 1 -    104932 ------T
i Mirounga_angustirostris.MirAng_flattened_line_8852    I 1 I 3
s Mirza_zaza.k141_226143                                     5433 2 +      8497 T-----T
i Mirza_zaza.k141_226143                                I 5 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 146177 1 +    154973 ------T
i Monodon_monoceros.MonMon_M_scaffold_5598              I 2 I 2
s Moschus_moschiferus.MosMos_scaffold_78805                  1256 1 -     19904 ------T
i Moschus_moschiferus.MosMos_scaffold_78805             I 1 I 3
s Mungos_mungo.MunMun_flattened_line_8729                  144690 1 -    168139 ------A
i Mungos_mungo.MunMun_flattened_line_8729               I 1 I 2
s Murina_feae.MurFea_scaffold_2254                          19313 1 -    100666 ------T
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70766359 1 +  92629107 ------a
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75489418 1 +  98207768 ------a
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67555646 1 +  89017189 ------a
i Mus_pahari.LT608305.1                                 C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             11633 1 +     98495 ------T
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 1 C 0
s Mustela_putorius.JH417978.1                             4424131 1 -  28371801 ------t
i Mustela_putorius.JH417978.1                           I 1 I 3
s Myocastor_coypus.MyoCoy_scaffold_3653                     89784 2 -    117718 G-----T
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               967623 1 +   8389877 ------t
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5019300 1 +   6462685 ------t
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3465205 1 -   3747815 ------t
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        10418 1 +     66751 ------T
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             4817 2 -      8794 T-----T
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL199251.1                           8590356 1 -  12625532 ------T
i Nannospalax_galili.KL199251.1                         I 31 n 1
s Nasalis_larvatus.k141_153429                               8380 2 +     48152 T-----T
i Nasalis_larvatus.k141_153429                          I 1 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4484663 1 -  14209539 ------t
i Neomonachus_schauinslandi.NINY01007774.1              I 1 I 3
s Neophocaena_asiaeorientalis.KZ688543.1                  3950789 1 -   4490290 ------t
i Neophocaena_asiaeorientalis.KZ688543.1                I 2 I 2
s Noctilio_leporinus.NocLep_scaffold_12062                  49086 1 +     94413 ------A
i Noctilio_leporinus.NocLep_scaffold_12062              I 1 C 0
s Nomascus_annamensis.k141_220265                             296 2 +      1763 T-----T
i Nomascus_annamensis.k141_220265                       I 1 C 0
s Nomascus_concolor.k141_226614                              1089 2 -      5092 T-----T
i Nomascus_concolor.k141_226614                         I 1 C 0
s Nomascus_gabriellae.k141_39679                               57 2 -     17937 T-----T
i Nomascus_gabriellae.k141_39679                        I 1 C 0
s Nomascus_siki_b.tarseq_80                             24807 2 -  18771707 T-----T
i Nomascus_siki_b.tarseq_80                         I 1 C 0
s Nomascus_siki_a.k141_595747                                  2510 2 +      4512 T-----T
i Nomascus_siki_a.k141_595747                             I 1 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                30706 1 +   3668941 ------t
i Nyctereutes_procyonoides.CAJHUB010000786.1            I 1 I 3
s Nycticebus_bengalensis.LG16                            65566900 2 -  95554990 T-----T
i Nycticebus_bengalensis.LG16                           I 1 C 0
s Nycticebus_coucang.k141_2051882                            3629 2 +      6470 T-----T
i Nycticebus_coucang.k141_2051882                       I 1 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65669234 1 +  89412551 ------T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     I 1 C 0
s Octodon_degus.JH651621.1                                3685340 2 +  10294119 G-----T
i Octodon_degus.JH651621.1                              C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1079463 1 +   1425656 ------t
i Odocoileus_virginianus.KZ101650.1                     I 1 I 3
s Okapia_johnstoni.LVCL01S0017931.1                         36760 1 +     78940 ------a
i Okapia_johnstoni.LVCL01S0017931.1                     I 1 I 3
s Ondatra_zibethicus.OndZib_scaffold_6821                  125112 1 +    145789 ------G
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  36912 1 +     62360 ------T
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7224474 1 -   7562323 ------t
i Orcinus_orca.KB316965.1                               I 2 I 2
s Orycteropus_afer.OryAfe_flattened_line_13509              57316 2 -     66828 T-----T
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141876070 2 + 163896628 t-----t
i Oryctolagus_cuniculus.CM000803.1                      I 1 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      307992 1 -    505867 ------a
i Otocyon_megalotis.JAEUCK010005121.1                   I 1 I 3
s Otolemur_crassicaudatus.k141_505435                         532 2 -     53940 A-----T
i Otolemur_crassicaudatus.k141_505435                   I 1 C 0
s Otolemur_garnettii.GL873528.1                          18008503 2 -  38779656 t-----t
i Otolemur_garnettii.GL873528.1                         I 1 C 0
s Ovis_aries.CM001582.2                                 134077021 1 - 275406953 ------a
i Ovis_aries.CM001582.2                                 I 1 I 3
s Ovis_canadensis.OviCan_scaffold_6251                      78235 1 +    140051 ------A
i Ovis_canadensis.OviCan_scaffold_6251                  I 1 I 3
s Pan_paniscus.CM003386.1                               127574520 2 - 205426864 T-----T
i Pan_paniscus.CM003386.1                               I 2 C 0
s Pan_troglodytes.CM009241.2                            120151673 2 - 196562556 t-----t
i Pan_troglodytes.CM009241.2                            I 2 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  34106 1 +    295523 ------T
i Panthera_onca.PanOnc_flattened_line_1615              I 1 I 2
s Panthera_pardus.KV860323.1                              3637842 1 +  18214204 ------t
i Panthera_pardus.KV860323.1                            I 1 I 2
s Panthera_tigris.KE721879.1                              5027515 1 -   6340057 ------t
i Panthera_tigris.KE721879.1                            I 1 I 2
s Pantholops_hodgsonii.KE114631.1                         1065881 1 -   1292953 ------a
i Pantholops_hodgsonii.KE114631.1                       I 1 I 3
s Papio_anubis.CM001492.2                               188156110 6 - 188283584 t-ttttt
i Papio_anubis.CM001492.2                               I 1 C 0
s Papio_cynocephalus.k141_883042                             4426 7 +      5367 TTTTTTT
i Papio_cynocephalus.k141_883042                        I 1 C 0
s Papio_hamadryas.Contig15                               47513495 6 +  47705337 TTTTT-T
i Papio_hamadryas.Contig15                              I 1 C 0
s Papio_kindae.k141_5458022                                 67474 1 -    104429 T------
i Papio_kindae.k141_5458022                             I 1 I 2
s Papio_papio.k141_979496                                    6007 6 +     14967 TTTTT-T
i Papio_papio.k141_979496                               I 1 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    115568 1 -    135482 ------T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 I 2 I 2
s Papio_ursinus.k141_1345919                                 1867 1 -      7628 T------
i Papio_ursinus.k141_1345919                            I 1 I 4
s Perodicticus_ibeanus.k141_117958                           5225 2 -     23713 A-----A
i Perodicticus_ibeanus.k141_117958                      I 1 C 0
s Perodicticus_potto.k141_713187                            24537 2 -     27972 A-----A
i Perodicticus_potto.k141_713187                        I 1 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      44355 2 -     45160 T-----T
i Perognathus_longimembris.PerPac_flattened_line_22291  I 1 C 0
s Peromyscus_maniculatus.KI615518.1                       4950149 1 -   8017169 ------G
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    12256 2 -     36578 T-----T
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            121079 1 -    122454 ------T
i Phocoena_phocoena.PhoPho_flattened_line_11948         I 2 I 2
s Piliocolobus_badius.k141_1987485                           1899 2 -      5908 T-----T
i Piliocolobus_badius.k141_1987485                      I 1 C 0
s Piliocolobus_gordonorum.k141_1270531                       2523 2 -     17985 T-----T
i Piliocolobus_gordonorum.k141_1270531                  I 1 C 0
s Piliocolobus_kirkii.k141_929665                            1890 2 +      7694 T-----T
i Piliocolobus_kirkii.k141_929665                       I 1 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26740368 2 +  26888534 t-----t
i Piliocolobus_tephrosceles.PDMG02000036.1              I 1 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            97242 1 +    112873 ------T
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_chrysocephala.k141_159118                        24924 2 +     78826 T-----T
i Pithecia_chrysocephala.k141_159118                    I 1 I 83
s Pithecia_hirsuta.k141_1152968                              8927 2 -     15800 T-----T
i Pithecia_hirsuta.k141_1152968                         I 1 I 128
s Pithecia_mittermeieri.k141_2119203                        12126 2 -     16101 T-----T
i Pithecia_mittermeieri.k141_2119203                    I 1 I 128
s Pithecia_pissinattii.k141_1102319                          5376 2 +      9673 T-----T
i Pithecia_pissinattii.k141_1102319                     C 0 I 107
s Pithecia_pithecia.tarseq_313                           13474376 2 -  19735023 T-----T
i Pithecia_pithecia.tarseq_313                          I 1 I 105
s Pithecia_vanzolinii.k141_831006                           13282 2 -     31692 A-----T
i Pithecia_vanzolinii.k141_831006                       I 1 I 104
s Platanista_gangetica.PlaMin_flattened_line_72990           5166 1 +     21690 ------T
i Platanista_gangetica.PlaMin_flattened_line_72990      I 2 I 2
s Plecturocebus_bernhardi.k141_959214                       22722 2 +     44506 T-----T
i Plecturocebus_bernhardi.k141_959214                   I 1 C 0
s Plecturocebus_brunneus.k141_498086                        22935 2 +     67491 T-----T
i Plecturocebus_brunneus.k141_498086                    I 1 C 0
s Plecturocebus_caligatus.k141_2539816                      13174 2 -     98129 T-----A
i Plecturocebus_caligatus.k141_2539816                  I 1 C 0
s Plecturocebus_cinerascens.k141_744510                     22774 2 +    147771 T-----T
i Plecturocebus_cinerascens.k141_744510                 I 1 C 0
s Plecturocebus_cupreus.k141_1223294                        23029 2 -     23762 T-----T
i Plecturocebus_cupreus.k141_1223294                    I 1 C 0
s Plecturocebus_dubius.k141_3565563                          3495 2 -     55515 T-----T
i Plecturocebus_dubius.k141_3565563                     I 1 C 0
s Plecturocebus_grovesi.k141_242819                         22848 2 +    152463 T-----T
i Plecturocebus_grovesi.k141_242819                     I 1 C 0
s Plecturocebus_hoffmannsi.k141_985533                        565 2 -    119457 T-----T
i Plecturocebus_hoffmannsi.k141_985533                  I 1 C 0
s Plecturocebus_miltoni.k141_841561                         12570 2 +    134592 T-----A
i Plecturocebus_miltoni.k141_841561                     I 1 C 0
s Plecturocebus_moloch.k141_890597                          23158 2 -     75465 T-----T
i Plecturocebus_moloch.k141_890597                      I 1 C 0
s Pongo_abelii.NDHI03003816.1                              187042 2 -    373494 T-----T
i Pongo_abelii.NDHI03003816.1                           I 1 C 0
s Pongo_pygmaeus.ctg62                                   19807690 2 +  19899266 T-----T
i Pongo_pygmaeus.ctg62                                  I 1 C 0
s Presbytis_comata.k141_672698                               5625 2 -     15069 T-----T
i Presbytis_comata.k141_672698                          I 1 C 0
s Presbytis_mitrata.k141_860013                              5759 2 +     14865 T-----T
i Presbytis_mitrata.k141_860013                         I 1 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                1511 2 -      9567 T-----T
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6848409 2 +  12164890 t-----t
i Prolemur_simus.MPIZ01000048.1                         I 6 C 0
s Propithecus_coronatus.k141_1353159                         3466 2 +     11805 T-----T
i Propithecus_coronatus.k141_1353159                    I 7 C 0
s Propithecus_diadema.k141_577245                           42805 2 +     52369 T-----T
i Propithecus_diadema.k141_577245                       I 4 C 0
s Propithecus_edwardsi.k141_1317105                         35191 2 -     44753 T-----T
i Propithecus_edwardsi.k141_1317105                     I 4 C 0
s Propithecus_perrieri.k141_7554                            17116 2 +     27322 T-----T
i Propithecus_perrieri.k141_7554                        I 4 C 0
s Propithecus_tattersalli.k141_907138                       16754 2 -     53241 T-----T
i Propithecus_tattersalli.k141_907138                   I 7 C 0
s Propithecus_verreauxi.k141_158021                         39019 2 -     48185 T-----T
i Propithecus_verreauxi.k141_158021                     I 7 C 0
s Psammomys_obesus.NESX01026517.1                           34051 1 +     77221 ------t
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        246440 1 -    344369 ------T
i Pteronura_brasiliensis.PteBra_flattened_line_1343     I 1 I 3
s Puma_concolor.QAVW01000427.1                          131534093 1 - 161321710 ------t
i Puma_concolor.QAVW01000427.1                          I 1 I 2
s Pygathrix_cinerea.k141_374971                             29746 2 +     56732 T-----T
i Pygathrix_cinerea.k141_374971                         I 1 C 0
s Pygathrix_nigripes_b.ctg79                                 6806236 2 +   6970761 T-----T
i Pygathrix_nigripes_b.ctg79                               I 1 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                15540 1 +     68503 ------T
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 1 I 3
s Rattus_norvegicus.chr11                                13915359 1 +  90463843 ------t
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinopithecus_bieti.k119_554384                              24 2 -     17045 T-----T
i Rhinopithecus_bieti.k119_554384                       I 1 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206377515 2 - 206558726 t-----t
i Rhinopithecus_roxellana.NC_044549.1                   I 1 C 0
s Rhinopithecus_strykeri.ctg4                            44856415 2 -  45163003 T-----T
i Rhinopithecus_strykeri.ctg4                           I 1 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       7707 1 +     12214 ------A
i Saiga_tatarica.SaiTat_scaffold_82192                  I 1 I 3
s Saimiri_boliviensis.NW_024100938.1                     15672588 2 -  43202129 t-----t
i Saimiri_boliviensis.NW_024100938.1                    I 1 C 0
s Saimiri_cassiquiarensis.k141_808270                        4505 2 +     34089 T-----T
i Saimiri_cassiquiarensis.k141_808270                   I 1 C 0
s Saimiri_macrodon.k141_2087127                              4446 2 -     60842 T-----T
i Saimiri_macrodon.k141_2087127                         I 1 C 0
s Saimiri_oerstedii.k141_841116                              4541 2 +     67014 T-----T
i Saimiri_oerstedii.k141_841116                         I 1 C 0
s Saimiri_sciureus.k141_1947592                              4519 2 +     60816 T-----T
i Saimiri_sciureus.k141_1947592                         I 1 C 0
s Saimiri_ustus.k141_1282476                                 4456 2 -     76454 T-----T
i Saimiri_ustus.k141_1282476                            I 1 C 0
s Sapajus_apella.ctg10                                   17341177 2 -  30362882 T-----T
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         20536 2 -     62485 T-----T
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   32062 1 -    114521 ------T
i Scalopus_aquaticus.ScaAqu_scaffold_9300               I 1 C 0
s Semnopithecus_entellus.k141_1572367                        3237 2 +     15331 T-----T
i Semnopithecus_entellus.k141_1572367                   I 1 C 0
s Semnopithecus_hypoleucos.k141_761524                       8634 2 +     20762 T-----T
i Semnopithecus_hypoleucos.k141_761524                  I 1 C 0
s Semnopithecus_johnii.k141_785014                         118636 2 +    130994 T-----T
i Semnopithecus_johnii.k141_785014                      I 1 C 0
s Semnopithecus_priam.k141_410937                           37423 2 +     46263 T-----T
i Semnopithecus_priam.k141_410937                       I 1 C 0
s Semnopithecus_schistaceus.k141_387461                     30537 2 +     42640 T-----T
i Semnopithecus_schistaceus.k141_387461                 I 1 C 0
s Semnopithecus_vetulus.k141_1143185                        13581 2 +     30600 T-----T
i Semnopithecus_vetulus.k141_1143185                    I 1 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  100096 1 -    120886 ------A
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            18637 1 +    739146 ------A
i Solenodon_paradoxus.SolPar_flattened_line_1012        I 1 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             234561 1 -    276980 ------T
i Spilogale_gracilis.SpiGra_flattened_line_905          I 2 I 3
s Suricata_suricatta.SurSur_flattened_line_20339            27352 1 +     62062 ------A
i Suricata_suricatta.SurSur_flattened_line_20339        I 1 I 2
s Sus_scrofa.CM000824.4                                 189271620 1 + 218635234 ------t
i Sus_scrofa.CM000824.4                                 I 1 I 2
s Symphalangus_syndactylus.tarseq_24                        14792 2 -  13920577 T-----T
i Symphalangus_syndactylus.tarseq_24                    I 1 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               6036 1 -      6213 ------T
i Tadarida_brasiliensis.TadBra_scaffold_145589          I 1 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               14480 2 +     45698 T-----T
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      806897 1 +   1148477 ------A
i Tapirus_indicus.TapInd_scaffold_176                   I 1 I 2
s Tapirus_terrestris.TapTer_scaffold_14939                  57592 1 +     99546 ------A
i Tapirus_terrestris.TapTer_scaffold_14939              I 1 I 2
s Tarsius_lariang.k141_609102                               26314 2 +     42269 A-----T
i Tarsius_lariang.k141_609102                           I 1 C 0
s Tarsius_wallacei.k141_48636                               59630 2 +     65473 A-----T
i Tarsius_wallacei.k141_48636                           I 1 C 0
s Theropithecus_gelada.CM009951.1                       194007636 2 - 194193292 t-----t
i Theropithecus_gelada.CM009951.1                       I 1 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  5312 2 +      6782 T-----T
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Trachypithecus_auratus.k141_738098                        26742 2 +     38948 T-----T
i Trachypithecus_auratus.k141_738098                    I 1 I 4
s Trachypithecus_crepusculus.k141_1588528                   20473 2 -     32910 T-----T
i Trachypithecus_crepusculus.k141_1588528               I 1 C 0
s Trachypithecus_cristatus.k141_1011511                      1860 2 -     12939 T-----T
i Trachypithecus_cristatus.k141_1011511                 I 2 I 4
s Trachypithecus_francoisi.k141_768164                       1795 2 -     14244 T-----T
i Trachypithecus_francoisi.k141_768164                  I 1 C 0
s Trachypithecus_geei.k141_670367                           43192 2 -     54611 T-----T
i Trachypithecus_geei.k141_670367                       I 1 C 0
s Trachypithecus_germaini.k141_868450                        1000 2 -     11566 T-----T
i Trachypithecus_germaini.k141_868450                   I 1 I 3
s Trachypithecus_hatinhensis.k141_504423                     3172 2 -     15592 T-----T
i Trachypithecus_hatinhensis.k141_504423                I 1 C 0
s Trachypithecus_laotum.k141_760702                          1829 2 +     14371 T-----T
i Trachypithecus_laotum.k141_760702                     I 1 C 0
s Trachypithecus_leucocephalus.k141_381681                    111 2 +     12481 T-----T
i Trachypithecus_leucocephalus.k141_381681              I 1 C 0
s Trachypithecus_obscurus.k141_1115109                       5232 2 -     28054 T-----T
i Trachypithecus_obscurus.k141_1115109                  I 1 C 0
s Trachypithecus_phayrei.ctg3                            44660032 2 -  44834318 T-----T
i Trachypithecus_phayrei.ctg3                           I 1 C 0
s Trachypithecus_pileatus.k141_1022309                       2335 2 +     13828 T-----T
i Trachypithecus_pileatus.k141_1022309                  I 1 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   4934 1 +     90398 ------T
i Tragulus_javanicus.TraJav_scaffold_14717              I 1 I 2
s Trichechus_manatus.JH594618.1                          16084658 2 +  31416278 t-----t
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2792680 2 -   3938065 t-----t
i Tupaia_chinensis.KB320831.1                           I 1 I 3
s Tupaia_tana.TupTan_flattened_line_68454                    4893 2 +     13056 T-----T
i Tupaia_tana.TupTan_flattened_line_68454               I 1 I 1
s Tursiops_truncatus.MRVK01000923.1                      69313189 1 -  96451834 ------t
i Tursiops_truncatus.MRVK01000923.1                     I 2 I 2
s Uropsilus_gracilis.UroGra_scaffold_69449                   1095 1 +     10241 ------T
i Uropsilus_gracilis.UroGra_scaffold_69449              I 1 C 0
s Varecia_rubra.k141_432109                                  5106 2 -     20643 T-----T
i Varecia_rubra.k141_432109                             I 1 C 0
s Varecia_variegata.k141_775891                             24647 2 -     33872 T-----T
i Varecia_variegata.k141_775891                         I 1 C 0
s Vicugna_pacos.KN269600.1                                1524440 1 -   2331223 ------t
i Vicugna_pacos.KN269600.1                              I 8 I 2
s Vulpes_lagopus.VulLag_flattened_line_2045                138084 1 -    281493 ------A
i Vulpes_lagopus.VulLag_flattened_line_2045             I 1 I 5
s Xerus_inauris.XerIna_scaffold_7898                       126664 1 -    134049 ------T
i Xerus_inauris.XerIna_scaffold_7898                    I 1 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     14771 1 -     20485 ------A
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           6689 1 -      8775 ------T
i Ziphius_cavirostris.ZipCav_flattened_line_127025      I 2 I 2
e Macroglossus_sobrinus.MacSob_scaffold_879                701370 0 +    802869 C
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             38964 0 -     47444 C
e Sorex_araneus.JH798170.1                               17750754 3364 -  27805282 I
e Erinaceus_europaeus.JH835290.1                         11534163 4 +  16010500 I
e Ochotona_princeps.JH802095.1                            4995784 6 -  23139505 I
e Zalophus_californianus.ZalCal_flattened_line_4097        214053 3 -    227762 I
e Ursus_maritimus.KK498671.1                              6514576 3 +  28682327 I
e Tonatia_saurophila.TonSau_scaffold_3334                  135629 0 -    259118 C
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                19076 0 +    109198 C
e Rhinolophus_sinicus.LVEH01000179.1                      1787585 1 +   2252614 I
e Pteropus_vampyrus.KN525959.1                             603701 0 -   3946241 C
e Pteropus_alecto.KB031157.1                             13245751 0 -  17261082 C
e Pteronotus_parnellii.KE867983.1                            3638 0 -     27784 C
e Odobenus_rosmarus.KB229369.1                             679327 3 -   3126709 I
e Mormoops_blainvillei.MorMeg_scaffold_2952                160993 0 +    265003 C
e Micronycteris_hirsuta.MicHir_scaffold_37978               22468 2 -     32043 I
e Megaderma_lyra.MegLyr_scaffold_3562                       64187 1 -    234502 I
e Hipposideros_galeritus.HipGal_scaffold_104691              7309 1 -      9143 I
e Hipposideros_armiger.JXIK01001085.1                      278164 1 -    477199 I
e Eidolon_helvum.KE772537.1                                 11997 0 +     24177 C
e Desmodus_rotundus.KZ672188.1                           18698564 0 -  18957592 C
e Craseonycteris_thonglongyai.CraTho_scaffold_22679         39468 1 -     40477 I
e Carollia_perspicillata.CarPer_scaffold_4436               59289 0 +     67245 C
e Artibeus_jamaicensis.ArtJam_scaffold_41619                 8495 0 -     29036 C
e Anoura_caudifer.AnoCau_scaffold_422                      390087 0 -    631301 C
e Ailuropoda_melanoleuca.LNAT01000321.1                  10657088 3 +  23371972 I
e Hylobates_pileatus_a.tarseq_592                             33391 319 -     60944 I
e Spermophilus_dauricus.KZ294190.1                        2239555 0 +   2842873 C
e Pygathrix_nigripes_a.k141_101123                             5629 5 +     18040 I
e Propithecus_coquerelli.NW_012147997.1                    667273 6500 -   2312742 I
e Pithecia_albicans.k141_991845                             43492 132 -     61926 I
e Mus_spretus.CM004110.1                                 74330596 0 +  97876770 C
e Marmota_marmota.CZRN01000005.1                         36873479 0 +  64221397 C
e Macaca_tonkeana.k141_2870633                               4280 0 -     27140 C
e Macaca_silenus.Contig12                                43840746 0 +  43892939 C
e Macaca_siberu.k141_741907                                 15628 0 -     55006 C
e Macaca_nigra.k141_282495                                   4275 0 -     46448 C
e Macaca_nemestrina.KQ004885.1                           11445605 0 +  11645122 C
e Macaca_mulatta.NC_041755.1                            196035432 3 + 196197964 I
e Macaca_maura.k141_251854                                  45328 0 -     79256 C
e Macaca_leonina.k141_467472                                 2111 0 -      7381 C
e Macaca_fascicularis.k141_155037                           46821 0 +     63263 C
e Macaca_cyclopis.k119_893486                                2000 3 -      3136 I
e Ictidomys_tridecemlineatus.JH393315.1                   7125639 0 +  13083262 C
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I
e Aotus_griseimembra.k141_3275623                            5344 0 +     22701 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               11638 2 +    209709 T----T
s Acinonyx_jubatus.LLWD01000356.1                         2033757 1 +   3721120 t-----
i Acinonyx_jubatus.LLWD01000356.1                       I 2 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    112381 2 -    189883 T----T
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 I 7
s Ailuropoda_melanoleuca.LNAT01000321.1                  10657091 1 +  23371972 t-----
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 3 C 0
s Ailurus_fulgens.LNAC01000003.1                          7094436 1 -  16596857 t-----
i Ailurus_fulgens.LNAC01000003.1                        I 3 I 1
s Allactaga_bullata.AllBul_scaffold_70162                   16669 2 -     22067 T----T
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   1131 2 -     60446 T----T
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Alouatta_belzebul.k141_1818029                            10044 2 -     18050 T----T
i Alouatta_belzebul.k141_1818029                        C 0 I 1
s Alouatta_caraya.k141_5460                                 11137 2 -     11521 T----T
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                             10721 2 -     21359 T----T
i Alouatta_discolor.k141_811576                         C 0 I 1
s Alouatta_juara.k141_1244470                                 336 2 +      2129 T----T
i Alouatta_juara.k141_1244470                           C 0 I 1
s Alouatta_macconnelli.k141_1331706                         10020 2 -     10438 T----T
i Alouatta_macconnelli.k141_1331706                     C 0 I 1
s Alouatta_nigerrima.k141_2718643                            6676 2 +      7047 T----T
i Alouatta_nigerrima.k141_2718643                       C 0 I 1
s Alouatta_palliata.k141_1316127                             9955 2 +     10410 T----T
i Alouatta_palliata.k141_1316127                        C 0 I 1
s Alouatta_puruensis.k141_1284840                            3764 2 -      4927 T----T
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3519883 1 +   4113121 t-----
i Ammotragus_lervia.NIVO01013474.1                      I 3 I 2
s Anoura_caudifer.AnoCau_scaffold_422                      390087 1 -    631301 T-----
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 I 2
s Antilocapra_americana.AntAmePen_scaffold_42841            30468 1 +     33004 T-----
i Antilocapra_americana.AntAmePen_scaffold_42841        I 3 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     3477 1 +      5067 T-----
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_587554                         824 2 +      9265 A----A
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 8495 1 -     29036 T-----
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 I 2
s Ateles_geoffroyi_b.tarseq_2582                             9539151 1 +  39197703 T-----
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_chamek.k141_1072810                                11436 2 +     89302 T----T
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             15939 1 -     58268 T-----
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             63931 2 +    119057 T----T
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               5901 2 -     25888 T----T
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 6552 2 -     16375 T----T
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                                172 2 +      6337 T----T
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26379967 1 +  51448160 T-----
i Balaenoptera_acutorostrata.KI537095.1                 I 2 C 0
s Balaenoptera_bonaerensis.DF502048.1                        5136 1 -     13118 T-----
i Balaenoptera_bonaerensis.DF502048.1                   I 2 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   42951 1 -     72089 G-----
i Beatragus_hunteri.BeaHun_scaffold_21644               I 3 C 0
s Bison_bison.KN264915.1                                  6559624 1 +   6870073 t-----
i Bison_bison.KN264915.1                                I 3 C 0
s Bos_indicus.CM003021.1                                138139728 1 - 161108492 t-----
i Bos_indicus.CM003021.1                                I 3 C 0
s Bos_mutus.JH883513.1                                     572266 1 -    998990 t-----
i Bos_mutus.JH883513.1                                  I 3 C 0
s Bos_taurus.CM000177.6                                 136295461 1 - 158972876 t-----
i Bos_taurus.CM000177.6                                 I 3 C 0
s Bubalus_bubalis.KI419065.1                              1232544 1 -   1914593 t-----
i Bubalus_bubalis.KI419065.1                            I 3 C 0
s Cacajao_ayresi.k141_724503                               113783 2 -    171031 T----T
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 12814 2 +    125063 T----T
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                14856 2 -    216513 T----T
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        7399 2 -    134917 T----T
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3219338 1 -   8989139 t-----
i Camelus_bactrianus.KN276303.1                         I 2 C 0
s Camelus_dromedarius.KN271192.1                           397040 1 -  15254737 t-----
i Camelus_dromedarius.KN271192.1                        I 2 C 0
s Camelus_ferus.KB016973.1                                2972775 1 +   6889770 t-----
i Camelus_ferus.KB016973.1                              I 2 C 0
s CanFam4.chr31                                          11519252 1 +  39901454 T-----
i CanFam4.chr31                                         I 3 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   14277 1 +     87036 T-----
i Canis_lupus_VD.CanFam_VD_scaffold_16982               I 3 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11265919 1 -  35597290 t-----
i Canis_lupus_dingo.QKWQ01001993.1                      I 3 C 0
s Canis_lupus_familiaris.chr31                           11088453 1 +  39895921 t-----
i Canis_lupus_familiaris.chr31                          I 3 C 0
s Canis_lupus_orion.HG994411.1                           16455468 1 -  44759192 t-----
i Canis_lupus_orion.HG994411.1                          I 3 C 0
s Capra_aegagrus.CM003214.1                              21324959 1 + 157394656 t-----
i Capra_aegagrus.CM003214.1                             I 3 C 0
s Capra_hircus.CM004562.1                               135706186 1 - 157403528 t-----
i Capra_hircus.CM004562.1                               I 3 C 0
s Carlito_syrichta.NW_007248099.1                          308833 2 +    345090 T----t
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               59289 1 +     67245 T-----
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 I 2
s Castor_canadensis.CasCan_scaffold_47037                   30496 2 +     33760 T----T
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   158647 1 -    276539 T-----
i Catagonus_wagneri.CatWag_scaffold_1305                I 2 C 0
s Cavia_aperea.AVPZ01000278.1                            15786362 3 -  24422027 t---tt
i Cavia_aperea.AVPZ01000278.1                           C 0 I 1
s Cavia_porcellus.DS562889.1                             15798298 3 -  24440124 t---tt
i Cavia_porcellus.DS562889.1                            C 0 I 1
s Cavia_tschudii.CavTsc_scaffold_488                       176489 3 +    436027 T---TT
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 I 1
s Cebus_albifrons.Contig22                               18890635 2 -  29618158 T----T
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 8179 2 -     26817 T----T
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                12419 2 +     25043 T----T
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         7868 2 +     21754 T----T
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4363645 1 +   7569818 t-----
i Ceratotherium_simum.JH767818.1                        I 2 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         3402 1 -      9338 T-----
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    I 2 C 0
s Cercocebus_atys.KQ010443.1                              6555075 2 +   6739814 t----t
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      26552 2 +     60454 T----T
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          1757 2 -     21101 T----T
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         59067 2 -    107033 T----T
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        1958 2 -     17608 T----T
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          29453 3 +     30494 T---TT
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          58299 2 -     59240 T----T
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          2000 2 +     16677 T----T
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           24159 2 +     35983 T----T
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11990686 2 +  12117833 T----T
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46477445 2 +  46592721 T----T
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      40996 2 -     45581 C----T
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       2001 2 +     35577 T----T
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        1777 2 -     25661 T----T
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        1756 2 -     17744 T----T
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        21372 2 +     37128 T----T
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           2558 2 -      6963 T----T
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 I 2
s Cheirogaleus_major.k141_1157592                           58836 2 -     68416 T----T
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            7880 2 +     13308 T----T
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             5441 6 -     18223 AAAAAT
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             22462 6 +     25473 AAAAAT
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           41499 6 +     57117 TAAAAT
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          46178 6 +     54541 AAAAAT
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15961531 3 +  43084221 t---tc
i Chinchilla_lanigera.JH721867.1                        C 0 I 1
s Chiropotes_israelita.k141_1189915                         70989 2 +    196370 T----T
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          15169 2 +     40510 T----T
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15138922 2 -  15256731 T----T
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      33970 2 -     53260 T----T
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101144530 2 + 101219884 t----t
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                16254 2 -     21363 T----T
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 I 1
s Choloepus_hoffmanni.KN194586.1                           761561 2 +    964067 t----t
i Choloepus_hoffmanni.KN194586.1                        C 0 I 2
s Chrysochloris_asiatica.ChrAsi_scaffold_3549804              177 2 -       354 T----T
i Chrysochloris_asiatica.ChrAsi_scaffold_3549804        C 0 C 0
s Colobus_angolensis.KN985967.1                          10886301 2 +  10971483 t----t
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147664467 2 + 156195979 T----T
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            16452 2 +     23629 T----T
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60613374 1 +  78930452 t-----
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         39469 1 -     40477 T-----
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     I 1 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 278331 2 -    399297 T----T
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53029014 2 +  72327488 T----T
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_88140              1933 1 +     11655 T-----
i Crocidura_indochinensis.CroInd_scaffold_88140         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            51791 1 -     70449 T-----
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 2 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  207926 2 -    956709 T----T
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 30506 3 -     67205 T---TT
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 I 1
s Cuniculus_paca.CunPac_flattened_line_16637                17548 3 +     26546 T---TT
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 I 1
s Dasyprocta_punctata.DasPun_flattened_line_634             58639 1 -    236241 -----T
i Dasyprocta_punctata.DasPun_flattened_line_634         I 1 I 1
s Dasypus_novemcinctus.JH568778.1                          183445 2 -   6883506 A----T
i Dasypus_novemcinctus.JH568778.1                       C 0 I 2
s Daubentonia_madagascariensis.ctg11                     16844691 2 +  31942871 T----T
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80036590 1 -  96802777 t-----
i Delphinapterus_leucas.KZ290064.1                      I 2 C 0
s Desmodus_rotundus.KZ672188.1                           18698564 1 -  18957592 t-----
i Desmodus_rotundus.KZ672188.1                          C 0 I 2
s Dicerorhinus_sumatrensis.PEKH010003161.1                 322294 1 +    993696 t-----
i Dicerorhinus_sumatrensis.PEKH010003161.1              I 2 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   2947 1 +    151128 T-----
i Diceros_bicornis.DicBicMic_scaffold_9545              I 2 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   156784 3 +    228994 T---TC
i Dinomys_branickii.DinBra_scaffold_1996                C 0 I 1
s Dipodomys_ordii.KN672545.1                              3656102 2 +   4240102 T----T
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 27735 2 +     28912 T----T
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                35888 3 -     73477 T---TT
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22998300 2 -  44670279 G----T
i Echinops_telfairi.JH980316.1                          C 0 I 2
s Eidolon_helvum.KE772537.1                                 11997 1 +     24177 t-----
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1491236 1 +   1727528 t-----
i Elaphurus_davidianus.JRFZ01086400.1                   I 3 C 0
s Elephantulus_edwardii.JH947210.1                        7815711 2 +  15467074 T----T
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        239561 2 -    369425 G----T
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           6674 2 -      7838 T----T
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85871958 1 +  99434291 t-----
i Enhydra_lutris.KZ291749.1                             I 5 C 0
s Eptesicus_fuscus.JH977687.1                             4703943 1 +   6522550 t-----
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5852746 1 -   7175178 T-----
i Equus_asinus.JREZ01000062.1                           I 2 C 0
s Equus_caballus.CM000402.2                              13351249 1 +  41866177 T-----
i Equus_caballus.CM000402.2                             I 2 C 0
s Equus_przewalskii.ATBW01073585.1                          12739 1 +     92910 t-----
i Equus_przewalskii.ATBW01073585.1                      I 2 C 0
s Erythrocebus_patas.Contig8                             48771097 2 -  48907691 T----T
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          314806 1 +    330699 T-----
i Eschrichtius_robustus.EscRob_flattened_line_685       I 2 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             61258 1 +     89355 T-----
i Eubalaena_japonica.EubJap_flattened_line_7756         I 2 C 0
s Eulemur_albifrons.k141_715837                              4892 2 +     13586 T----T
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               4823 2 -      6809 T----T
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            11300 2 +     36558 T----T
i Eulemur_coronatus.k141_3240342                        I 2 C 0
s Eulemur_flavifrons.k141_903901                             7621 2 +     60246 T----T
i Eulemur_flavifrons.k141_903901                        I 1 C 0
s Eulemur_fulvus.k141_653297                                11097 2 +    109717 T----T
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               15483 2 +     16540 T----T
i Eulemur_macaco.k141_1341545                           I 1 C 0
s Eulemur_mongoz.k141_825972                                15758 2 +     27497 T----T
i Eulemur_mongoz.k141_825972                            I 2 C 0
s Eulemur_rubriventer.k141_411740                           18215 2 +     26808 T----T
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                32949 2 +     46535 T----T
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              15677 2 -     29447 T----T
i Eulemur_sanfordi.k141_186399                          I 7 C 0
s Felis_catus.CM001386.2                                129892716 1 - 159252932 t-----
i Felis_catus.CM001386.2                                I 2 C 0
s Felis_catus_fca126.CM031420.1                         129279803 1 - 158578461 t-----
i Felis_catus_fca126.CM031420.1                         I 2 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 20948 1 +     52776 T-----
i Felis_nigripes.FelNig_flattened_line_8080             I 2 C 0
s Galago_moholi.ctg555                                     210718 2 -    847004 T----T
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           13093 2 -     43889 G----T
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          10165 2 +     27357 T----T
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               156068 2 +    324696 T----T
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    181036 1 -    189561 t-----
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 2 C 0
s Glis_glis.GliGli_scaffold_79770                           12862 2 -     18683 T----T
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               5156 2 -     14630 T----T
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119652255 2 - 195582420 T----T
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   77407 2 +    118900 T----T
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         1669 2 +     10286 T----T
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                              146 2 -     11661 T----T
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             5475 2 +     56096 T----T
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        28725 2 -     42470 T----T
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        45348 2 -     54384 T----T
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              16998 1 +     53719 T-----
i Helogale_parvula.HelPar_flattened_line_22962          I 2 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                27229 1 -     91191 T-----
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 3 C 0
s Heterocephalus_glaber.JH602058.1                        2550869 3 +  31725842 T---TT
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               60423 2 +     73687 T----T
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              146884 1 +    277961 T-----
i Hippopotamus_amphibius.HipAmp_scaffold_1308           I 2 C 0
s Hipposideros_armiger.JXIK01001085.1                      278165 1 -    477199 t-----
i Hipposideros_armiger.JXIK01001085.1                   I 1 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              7310 1 -      9143 T-----
i Hipposideros_galeritus.HipGal_scaffold_104691         I 1 C 0
s Hoolock_leuconedys.ctg79                                      4563 2 -   7690867 C----T
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 17068 1 -     67322 T-----
i Hyaena_hyaena.HyaHya_flattened_line_20729             I 2 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           18750 3 -    119109 T---TT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 I 1
s Hylobates_abbotti.k141_493872                              4986 2 +      5897 C----T
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_624065                               1852 2 +      2112 C----T
i Hylobates_agilis.k141_624065                          C 0 C 0
s Hylobates_klossii.k141_285563                                31 2 +      1026 C----T
i Hylobates_klossii.k141_285563                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14624533 2 -  25970782 C----T
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            1788 2 -      2977 C----T
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     5928 2 +     22540 T----T
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Indri_indri.k141_4418183                                   1319 2 -      1457 T----T
i Indri_indri.k141_4418183                              C 0 n 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               8795 1 +     17520 T-----
i Inia_geoffrensis.IniGeo_flattened_line_66725          I 2 C 0
s Jaculus_jaculus.JH725517.1                              8565678 2 +  11848649 t----t
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               23413 1 +     37189 T-----
i Kogia_breviceps.KogBre_flattened_line_35920           I 2 I 3
s Lagothrix_lagothricha.k141_12968                          50022 2 -    147782 T----T
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   114033 1 -    115756 T-----
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 I 3
s Lemur_catta.scaffold_1                                258407030 2 - 285822530 T----T
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        23777 1 +     39228 T-----
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            53161 1 +     63517 T-----
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        78420 2 +    116806 T----T
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     31416 1 -     33031 T-----
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3085762 1 -   3498232 t-----
i Leptonychotes_weddellii.KB714749.1                    I 3 C 0
s Lepus_americanus.LepAme_scaffold_62849                    13038 2 +     22452 T----T
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            135751 1 +   3060487 t-----
i Lipotes_vexillifer.KE558548.1                         I 2 C 0
s Lophocebus_aterrimus.ctg55                             19248169 2 +  19376315 T----T
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           10477 2 +     84689 T----T
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3778227 2 +   6799190 T----T
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20594004 2 -  62548349 t----t
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11087909 1 +  39895028 t-----
i Lycaon_pictus.CM007556.1                              I 3 C 0
s Macaca_arctoides.k141_2201161                             19905 2 +     74745 T----T
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12706361 2 +  12821369 T----T
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                2003 2 -      3136 T----T
i Macaca_cyclopis.k119_893486                           I 3 C 0
s Macaca_fascicularis.k141_155037                           46821 2 +     63263 T----T
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                 1526 2 -      2568 T----T
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 2111 2 -      7381 T----T
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  45328 2 -     79256 T----T
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196035435 2 + 196197964 t----t
i Macaca_mulatta.NC_041755.1                            I 3 C 0
s Macaca_nemestrina.KQ004885.1                           11445605 2 +  11645122 t----t
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   4275 2 -     46448 T----T
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                1949 2 -     13212 T----T
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 15628 2 -     55006 T----T
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43840746 2 +  43892939 T----T
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               16914 2 -     24607 T----T
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               4280 2 -     27140 T----T
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                701370 1 +    802869 T-----
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43437329 2 -  43563597 T----T
i Mandrillus_leucophaeus.scaffold125                    I 6 C 0
s Mandrillus_sphinx.Contig144                             4450149 2 -   4543643 T----T
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            145399 1 +    252755 t-----
i Manis_javanica.JSZB01003966.1                         I 2 C 0
s Manis_pentadactyla.KN017078.1                             35476 1 +     58827 t-----
i Manis_pentadactyla.KN017078.1                         I 2 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       64188 1 -    234502 T-----
i Megaderma_lyra.MegLyr_scaffold_3562                   I 1 C 0
s Mellivora_capensis.MelCap_flattened_line_15433              766 1 -     87323 T-----
i Mellivora_capensis.MelCap_flattened_line_15433        I 4 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               12526 2 +     15977 T----T
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 I 4
s Mesocricetus_auratus.KB708139.1                         1046723 2 -  26018355 T----T
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_227248                     85 1 -      1377 T-----
i Mesoplodon_bidens.MesBid_scaffold_227248              I 2 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  34277 2 -     48017 G----A
i Microgale_talazaci.MicTal_scaffold_34660              C 0 I 3
s Micronycteris_hirsuta.MicHir_scaffold_37978               22470 1 -     32043 T-----
i Micronycteris_hirsuta.MicHir_scaffold_37978           I 2 I 2
s Microtus_ochrogaster.CM001673.1                        22819860 2 -  98408828 t----t
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8209465 1 +  10048721 t-----
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            34119 1 +     45743 T-----
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         1878 2 +     29742 T----T
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        11275 1 -    104932 T-----
i Mirounga_angustirostris.MirAng_flattened_line_8852    I 3 C 0
s Mirza_zaza.k141_226143                                     5435 2 +      8497 T----T
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 146180 1 +    154973 T-----
i Monodon_monoceros.MonMon_M_scaffold_5598              I 2 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                160993 1 +    265003 T-----
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  1260 1 -     19904 T-----
i Moschus_moschiferus.MosMos_scaffold_78805             I 3 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  144693 1 -    168139 T-----
i Mungos_mungo.MunMun_flattened_line_8729               I 2 C 0
s Murina_feae.MurFea_scaffold_2254                          19314 1 -    100666 T-----
i Murina_feae.MurFea_scaffold_2254                      C 0 I 3
s Mus_caroli.LT608236.1                                  70766360 2 +  92629107 t----t
i Mus_caroli.LT608236.1                                 C 0 I 4
s Mus_musculus.chr16                                     75489419 2 +  98207768 t----t
i Mus_musculus.chr16                                    C 0 I 4
s Mus_pahari.LT608305.1                                  67555647 2 +  89017189 t----t
i Mus_pahari.LT608305.1                                 C 0 I 4
s Mus_spretus.CM004110.1                                 74330596 2 +  97876770 t----t
i Mus_spretus.CM004110.1                                C 0 I 4
s Muscardinus_avellanarius.MusAve_scaffold_9643             11634 2 +     98495 T----T
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4424135 1 -  28371801 t-----
i Mustela_putorius.JH417978.1                           I 3 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     89786 3 -    117718 T---TC
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 I 1
s Myotis_brandtii.KE161952.1                               967624 1 +   8389877 t-----
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5019301 1 +   6462685 t-----
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3465206 1 -   3747815 t-----
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        10419 1 +     66751 T-----
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             4819 2 -      8794 T----T
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 I 1
s Nannospalax_galili.KL201303.1                            118468 2 +    362372 T----T
i Nannospalax_galili.KL201303.1                         I 1 C 0
s Nasalis_larvatus.k141_153429                               8382 2 +     48152 T----T
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4484667 1 -  14209539 t-----
i Neomonachus_schauinslandi.NINY01007774.1              I 3 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3950792 1 -   4490290 t-----
i Neophocaena_asiaeorientalis.KZ688543.1                I 2 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  49087 1 +     94413 T-----
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_220265                             298 2 +      1763 C----T
i Nomascus_annamensis.k141_220265                       C 0 C 0
s Nomascus_concolor.k141_226614                              1091 2 -      5092 C----T
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_39679                               59 2 -     17937 C----T
i Nomascus_gabriellae.k141_39679                        C 0 C 0
s Nomascus_siki_b.tarseq_80                             24809 2 -  18771707 C----T
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  2512 2 +      4512 C----T
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                30710 1 +   3668941 t-----
i Nyctereutes_procyonoides.CAJHUB010000786.1            I 3 C 0
s Nycticebus_bengalensis.LG16                            65566902 2 -  95554990 T----T
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            3631 2 +      6470 T----T
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65669235 2 +  89412551 T----T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Octodon_degus.JH651621.1                                3685342 3 +  10294119 T---TT
i Octodon_degus.JH651621.1                              C 0 I 1
s Odobenus_rosmarus.KB229369.1                             679330 1 -   3126709 t-----
i Odobenus_rosmarus.KB229369.1                          I 3 C 0
s Odocoileus_virginianus.KZ101650.1                       1079467 1 +   1425656 t-----
i Odocoileus_virginianus.KZ101650.1                     I 3 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         36764 1 +     78940 t-----
i Okapia_johnstoni.LVCL01S0017931.1                     I 3 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  125113 2 +    145789 T----T
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  36913 2 +     62360 T----T
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7224477 1 -   7562323 t-----
i Orcinus_orca.KB316965.1                               I 2 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              57318 2 -     66828 T----T
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141876072 2 + 163896628 t----t
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      307996 1 -    505867 t-----
i Otocyon_megalotis.JAEUCK010005121.1                   I 3 C 0
s Otolemur_crassicaudatus.k141_505435                         534 2 -     53940 T----T
i Otolemur_crassicaudatus.k141_505435                   C 0 I 1
s Otolemur_garnettii.GL873528.1                          18008505 2 -  38779656 t----t
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134077025 1 - 275406953 t-----
i Ovis_aries.CM001582.2                                 I 3 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      78239 1 +    140051 T-----
i Ovis_canadensis.OviCan_scaffold_6251                  I 3 C 0
s Pan_paniscus.CM003386.1                               127574522 2 - 205426864 T----T
i Pan_paniscus.CM003386.1                               C 0 I 17
s Pan_troglodytes.CM009241.2                            120151675 2 - 196562556 t----t
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  34109 1 +    295523 T-----
i Panthera_onca.PanOnc_flattened_line_1615              I 2 C 0
s Panthera_pardus.KV860323.1                              3637845 1 +  18214204 t-----
i Panthera_pardus.KV860323.1                            I 2 C 0
s Panthera_tigris.KE721879.1                              5027518 1 -   6340057 t-----
i Panthera_tigris.KE721879.1                            I 2 C 0
s Pantholops_hodgsonii.KE114631.1                         1065885 1 -   1292953 t-----
i Pantholops_hodgsonii.KE114631.1                       I 3 C 0
s Papio_anubis.CM001492.2                               188156116 2 - 188283584 t----t
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             4433 2 +      5367 T----T
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47513501 2 +  47705337 T----T
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 67477 2 -    104429 T----T
i Papio_kindae.k141_5458022                             I 2 C 0
s Papio_papio.k141_979496                                    6013 2 +     14967 T----T
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 1872 2 -      7628 T----T
i Papio_ursinus.k141_1345919                            I 4 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    115571 1 -    135482 T-----
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 I 2 C 0
s Perodicticus_ibeanus.k141_117958                           5227 2 -     23713 A----A
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            24539 2 -     27972 A----A
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      44357 2 -     45160 T----T
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 I 2
s Peromyscus_maniculatus.KI615518.1                       4950150 2 -   8017169 T----T
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    12258 4 -     36578 T--TTT
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            121082 1 -    122454 T-----
i Phocoena_phocoena.PhoPho_flattened_line_11948         I 2 C 0
s Piliocolobus_badius.k141_1987485                           1901 2 -      5908 T----T
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       2525 2 -     17985 G----T
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            1892 2 +      7694 T----T
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26740370 2 +  26888534 t----t
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            97243 1 +    112873 T-----
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 I 11
s Pithecia_albicans.k141_991845                             43624 2 -     61926 t----c
i Pithecia_albicans.k141_991845                         I 132 C 0
s Pithecia_chrysocephala.k141_159118                        25009 2 +     78826 T----C
i Pithecia_chrysocephala.k141_159118                    I 83 C 0
s Pithecia_hirsuta.k141_1152968                              9057 2 -     15800 T----C
i Pithecia_hirsuta.k141_1152968                         I 128 C 0
s Pithecia_mittermeieri.k141_2119203                        12256 2 -     16101 T----C
i Pithecia_mittermeieri.k141_2119203                    I 128 C 0
s Pithecia_pissinattii.k141_1102319                          5485 2 +      9673 T----C
i Pithecia_pissinattii.k141_1102319                     I 107 C 0
s Pithecia_pithecia.tarseq_313                           13474483 2 -  19735023 T----C
i Pithecia_pithecia.tarseq_313                          I 105 C 0
s Pithecia_vanzolinii.k141_831006                           13388 2 -     31692 T----C
i Pithecia_vanzolinii.k141_831006                       I 104 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           5169 1 +     21690 T-----
i Platanista_gangetica.PlaMin_flattened_line_72990      I 2 C 0
s Plecturocebus_bernhardi.k141_959214                       22724 6 +     44506 AAAAAT
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        22937 6 +     67491 AAAAAT
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      13176 6 -     98129 AAAAAT
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     22776 6 +    147771 AAAAAT
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        23031 6 -     23762 AAAAAT
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          3497 6 -     55515 AAAAAT
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         22850 6 +    152463 AAAAAT
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                        567 6 -    119457 AAAAAT
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         12572 6 +    134592 AAAAAT
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          23160 6 -     75465 AAAAAT
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              187044 2 -    373494 T----T
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19807692 2 +  19899266 T----T
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               5627 5 -     15069 T-TTTT
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              5761 1 +     14865 T-----
i Presbytis_mitrata.k141_860013                         C 0 I 5
s Procavia_capensis.ProCapCap_scaffold_149274                1513 2 -      9567 T----T
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6848411 2 +  12164890 t----t
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coronatus.k141_1353159                         3468 2 +     11805 T----T
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           42807 2 +     52369 T----T
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         35193 2 -     44753 T----T
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            17118 2 +     27322 T----T
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       16756 1 -     53241 T-----
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Psammomys_obesus.NESX01026517.1                           34052 2 +     77221 t----t
i Psammomys_obesus.NESX01026517.1                       C 0 I 4
s Pteronotus_parnellii.KE867983.1                            3638 1 -     27784 t-----
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        246444 1 -    344369 T-----
i Pteronura_brasiliensis.PteBra_flattened_line_1343     I 3 C 0
s Pteropus_alecto.KB031157.1                             13245751 1 -  17261082 t-----
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             603701 1 -   3946241 t-----
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131534096 1 - 161321710 t-----
i Puma_concolor.QAVW01000427.1                          I 2 C 0
s Pygathrix_cinerea.k141_374971                             29748 2 +     56732 T----T
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6806238 1 +   6970761 T-----
i Pygathrix_nigripes_b.ctg79                               C 0 I 4
s Rangifer_tarandus.RanTarSib_scaffold_24239                15544 1 +     68503 T-----
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 3 C 0
s Rattus_norvegicus.chr11                                13915360 2 +  90463843 t----t
i Rattus_norvegicus.chr11                               C 0 I 4
s Rhinolophus_sinicus.LVEH01000179.1                      1787586 1 +   2252614 t-----
i Rhinolophus_sinicus.LVEH01000179.1                    I 1 C 0
s Rhinopithecus_bieti.k119_554384                              26 5 -     17045 T-TTTT
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206377517 2 - 206558726 t----t
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44856417 5 -  45163003 T-TTTT
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                19076 1 +    109198 T-----
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       7711 1 +     12214 T-----
i Saiga_tatarica.SaiTat_scaffold_82192                  I 3 C 0
s Saimiri_boliviensis.NW_024100938.1                     15672590 2 -  43202129 t----a
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        4507 2 +     34089 T----A
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              4448 2 -     60842 T----A
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              4543 2 +     67014 T----A
i Saimiri_oerstedii.k141_841116                         C 0 I 11
s Saimiri_sciureus.k141_1947592                              4521 2 +     60816 T----A
i Saimiri_sciureus.k141_1947592                         C 0 I 11
s Saimiri_ustus.k141_1282476                                 4458 2 -     76454 T----A
i Saimiri_ustus.k141_1282476                            C 0 I 11
s Sapajus_apella.ctg10                                   17341179 2 -  30362882 T----T
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         20538 2 -     62485 T----T
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   32063 1 -    114521 T-----
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        3239 4 +     15331 T--TTT
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       8636 2 +     20762 T----T
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         118638 2 +    130994 T----T
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           37425 2 +     46263 T----T
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     30539 2 +     42640 T----T
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        13583 2 +     30600 T----T
i Semnopithecus_vetulus.k141_1143185                    C 0 I 1
s Sigmodon_hispidus.SigHis_scaffold_11332                  100097 2 -    120886 T----T
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            18638 1 +    739146 A-----
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             234565 1 -    276980 T-----
i Spilogale_gracilis.SpiGra_flattened_line_905          I 3 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            27355 1 +     62062 T-----
i Suricata_suricatta.SurSur_flattened_line_20339        I 2 C 0
s Sus_scrofa.CM000824.4                                 189271623 1 + 218635234 t-----
i Sus_scrofa.CM000824.4                                 I 2 C 0
s Symphalangus_syndactylus.tarseq_24                        14794 2 -  13920577 C----T
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               6037 1 -      6213 T-----
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               14482 2 +     45698 T----T
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 I 1
s Tapirus_indicus.TapInd_scaffold_176                      806900 1 +   1148477 T-----
i Tapirus_indicus.TapInd_scaffold_176                   I 2 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  57595 1 +     99546 T-----
i Tapirus_terrestris.TapTer_scaffold_14939              I 2 C 0
s Tarsius_lariang.k141_609102                               26316 2 +     42269 T----T
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               59632 2 +     65473 T----T
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194007638 2 - 194193292 t----t
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  5314 2 +      6782 T----T
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 I 6
s Tonatia_saurophila.TonSau_scaffold_3334                  135629 1 -    259118 T-----
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 I 2
s Trachypithecus_crepusculus.k141_1588528                   20475 1 -     32910 T-----
i Trachypithecus_crepusculus.k141_1588528               C 0 I 4
s Trachypithecus_francoisi.k141_768164                       1797 1 -     14244 T-----
i Trachypithecus_francoisi.k141_768164                  C 0 I 4
s Trachypithecus_geei.k141_670367                           43194 2 -     54611 T----T
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     3174 2 -     15592 T----T
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          1831 2 +     14371 T----T
i Trachypithecus_laotum.k141_760702                     C 0 I 4
s Trachypithecus_leucocephalus.k141_381681                    113 1 +     12481 T-----
i Trachypithecus_leucocephalus.k141_381681              C 0 I 5
s Trachypithecus_obscurus.k141_1115109                       5234 1 -     28054 T-----
i Trachypithecus_obscurus.k141_1115109                  C 0 I 4
s Trachypithecus_phayrei.ctg3                            44660034 1 -  44834318 T-----
i Trachypithecus_phayrei.ctg3                           C 0 I 4
s Trachypithecus_pileatus.k141_1022309                       2337 2 +     13828 T----T
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   4937 1 +     90398 G-----
i Tragulus_javanicus.TraJav_scaffold_14717              I 2 C 0
s Trichechus_manatus.JH594618.1                          16084660 2 +  31416278 t----t
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2792685 2 -   3938065 t----t
i Tupaia_chinensis.KB320831.1                           I 3 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    4896 2 +     13056 T----T
i Tupaia_tana.TupTan_flattened_line_68454               I 1 C 0
s Tursiops_truncatus.MRVK01000923.1                      69313192 1 -  96451834 t-----
i Tursiops_truncatus.MRVK01000923.1                     I 2 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   1096 1 +     10241 T-----
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6514579 1 +  28682327 t-----
i Ursus_maritimus.KK498671.1                            I 3 C 0
s Varecia_rubra.k141_432109                                  5108 2 -     20643 T----T
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             24649 2 -     33872 T----T
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1524443 1 -   2331223 t-----
i Vicugna_pacos.KN269600.1                              I 2 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                138090 1 -    281493 T-----
i Vulpes_lagopus.VulLag_flattened_line_2045             I 5 C 0
s Xerus_inauris.XerIna_scaffold_7898                       126665 1 -    134049 T-----
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        214056 1 -    227762 T-----
i Zalophus_californianus.ZalCal_flattened_line_4097     I 3 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     14772 2 -     20485 T----C
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           6692 1 -      8775 T-----
i Ziphius_cavirostris.ZipCav_flattened_line_127025      I 2 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             38964 0 -     47444 C
e Sorex_araneus.JH798170.1                               17750754 3364 -  27805282 I
e Erinaceus_europaeus.JH835290.1                         11534163 4 +  16010500 I
e Ochotona_princeps.JH802095.1                            4995784 6 -  23139505 I
e Hylobates_pileatus_a.tarseq_592                             33391 319 -     60944 I
e Trachypithecus_germaini.k141_868450                        1002 3 -     11566 I
e Trachypithecus_cristatus.k141_1011511                      1862 4 -     12939 I
e Trachypithecus_auratus.k141_738098                        26744 4 +     38948 I
e Spermophilus_dauricus.KZ294190.1                        2239555 0 +   2842873 C
e Pygathrix_nigripes_a.k141_101123                             5629 5 +     18040 I
e Propithecus_verreauxi.k141_158021                         39021 0 -     48185 C
e Propithecus_coquerelli.NW_012147997.1                    667273 6500 -   2312742 I
e Microcebus_murinus.CM007691.1                          16510048 0 +  47401472 C
e Marmota_marmota.CZRN01000005.1                         36873479 0 +  64221397 C
e Ictidomys_tridecemlineatus.JH393315.1                   7125639 0 +  13083262 C
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I
e Ateles_belzebuth.k141_1348307                             60424 0 +     85812 C
e Aotus_vociferans.k141_718647                               5891 0 +     23246 C
e Aotus_trivirgatus.k141_1740727                             5889 0 -    104377 C
e Aotus_nancymaae.KZ196176.1                              5749303 0 +   9889416 C
e Aotus_griseimembra.k141_3275623                            5344 0 +     22701 C
e Aotus_azarae.k141_3170768                                 62404 0 +     78111 C
e Allochrocebus_solatus.k141_371672                          1747 0 -     80423 C
e Allochrocebus_preussi.k141_1108977                          788 0 +     38766 C
e Allochrocebus_lhoesti.k141_3566948                         1853 0 -     29318 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               11640 17 +    209709 T--------T----G------G--AT---TAT----A-----------A-A-----TA-A---A--C
s Acinonyx_jubatus.LLWD01000356.1                         2033758 14 +   3721120 t--------t----g------a--at---tat----a-----------A-A-----TT---------
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    112390 17 -    189883 T--------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 7 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10657092 14 +  23371972 t--------t----g------a--at---tat----a-----------a-a-----ta---------
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7094438 12 -  16596857 --------------g------a--at---tat----a-----------a-a-----ta---------
i Ailurus_fulgens.LNAC01000003.1                        I 1 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   16671 17 -     22067 T--------G----A------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   1133 17 -     60446 T--------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         1853 16 -     29318 ---------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                          788 16 +     38766 ---------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          1747 16 -     80423 ---------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            10047 22 -     18050 --------------A------A--AT---TAT----AA-AA-AA-A--AAA-----AA-A---A--C
i Alouatta_belzebul.k141_1818029                        I 1 C 0
s Alouatta_caraya.k141_5460                                 11139 22 -     11521 --------------A------A--AT---TAT----AA-A--------A-AAAAAAAA-A---A--C
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                             10724 18 -     21359 --------------T------A--AT---TAT----AA-A--------AAA-----AA-A---A--C
i Alouatta_discolor.k141_811576                         I 1 C 0
s Alouatta_juara.k141_1244470                                 339 19 +      2129 --------------T------A--AT---TAT----AA-A--------A-A-----AA-A---AAAC
i Alouatta_juara.k141_1244470                           I 1 C 0
s Alouatta_macconnelli.k141_1331706                         10023 19 -     10438 --------------T------A--AT---TAT----AA-A--------A-AAA---AA-A---A--C
i Alouatta_macconnelli.k141_1331706                     I 1 C 0
s Alouatta_nigerrima.k141_2718643                            6679 21 +      7047 --------------A------A--AT---TAT----AA-A--------A-AAAAA-AA-A---A--C
i Alouatta_nigerrima.k141_2718643                       I 1 C 0
s Alouatta_palliata.k141_1316127                             9958 19 +     10410 --------------T------A--AT---TAT----AA-AA-A-----A-A-----AA-A---A--C
i Alouatta_palliata.k141_1316127                        I 1 C 0
s Alouatta_puruensis.k141_1284840                            3766 17 -      4927 --------------T------A--AT---TAT----AA-A--------A-A-----AA-A---A--T
i Alouatta_puruensis.k141_1284840                       C 0 I 1
s Ammotragus_lervia.NIVO01013474.1                        3519886 14 +   4113121 --------------g------a--at---tat----a-----------a-a-----ta-a---a---
i Ammotragus_lervia.NIVO01013474.1                      I 2 I 3
s Anoura_caudifer.AnoCau_scaffold_422                      390090 13 -    631301 ---------------------A--AT---TAT----A-----------A-A-----TA-A---A---
i Anoura_caudifer.AnoCau_scaffold_422                   I 2 I 3
s Antilocapra_americana.AntAmePen_scaffold_42841            30469 16 +     33004 T--------T----G------A--AT---TAT----A-----------A-A-----TA-A---A---
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 I 3
s Aotus_azarae.k141_3170768                                 62404 21 +     78111 --------------TTT--T-A--AT---TAT----AA-A--------ATA-----AA-A---A--C
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            5344 23 +     22701 --------------TTT--TTA--AT---TAT----AA-A--------A-A-----AA-A-AAA--C
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5749303 21 +   9889416 --------------t--tttta--at---tat----a---------aaa-a-----aa-a---a--c
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             5889 23 -    104377 --------------TTT----A--AT---TATTAAAAA-A--------A-A-----AA-A---A--C
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               5891 23 +     23246 --------------TTTAATTA--TT---AAA----AA-A--------A-A-----AA-A---A--C
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     3478 17 +      5067 T--------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_587554                         826 14 +      9265 A--------T----A------T--A------T----A-----------T-A-----TA-A---A--C
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 8498 14 -     29036 ------------------------ATTA-TAT----A-----------A-A-----TA-C---A---
i Artibeus_jamaicensis.ArtJam_scaffold_41619            I 2 I 3
s Ateles_geoffroyi_b.tarseq_2582                             9539152 22 +  39197703 T--------T-TTTT------A--AT---TAT----AA-A--------A-A-----AA-A---A--C
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             60424 21 +     85812 T--------T--TTT------A--CT---TAT----AA-A--------A-A-----AA-A---A--C
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                11438 20 +     89302 T--------T--TTA------A--AT---TAT----AA----------A-A-----AA-A---A--C
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             15940 21 -     58268 T--------T--TTT------A--AT---TAT----AA-A--------A-A-----AA-A---A--C
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             63933 20 +    119057 T--------T--TTA------A--AT---TAT----AA----------A-A-----AA-A---A--C
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               5903 21 -     25888 T--------T--TTT------A--AT---TAT----AA-A--------A-A-----AA-A---A--C
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 6554 17 -     16375 T--------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                                174 16 +      6337 ---------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26379968 16 +  51448160 T--------G----A------A--AC---TAT----A-----------A-A-----TA-A---A---
i Balaenoptera_acutorostrata.KI537095.1                 C 0 I 3
s Balaenoptera_bonaerensis.DF502048.1                        5137 16 -     13118 T--------G----A------A--AC---TAT----A-----------A-A-----TA-A---A---
i Balaenoptera_bonaerensis.DF502048.1                   C 0 I 3
s Beatragus_hunteri.BeaHun_scaffold_21644                   42952 16 -     72089 T--------G----G------A--AT---TAT----A-----------A-A-----TA-A---A---
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 I 3
s Bison_bison.KN264915.1                                  6559625 10 +   6870073 t--------t----g------a--at---tat----a------------------------------
i Bison_bison.KN264915.1                                C 0 I 5
s Bos_indicus.CM003021.1                                138139729 16 - 161108492 t--------t----g------a--at---tat----a-----------a-a-----ta-a---a---
i Bos_indicus.CM003021.1                                C 0 I 3
s Bos_mutus.JH883513.1                                     572267 16 -    998990 t--------t----g------a--at---tat----a-----------a-a-----ta-a---a---
i Bos_mutus.JH883513.1                                  C 0 I 3
s Bos_taurus.CM000177.6                                 136295462 16 - 158972876 t--------t----g------a--at---tat----a-----------a-a-----ta-a---a---
i Bos_taurus.CM000177.6                                 C 0 I 3
s Bubalus_bubalis.KI419065.1                              1232545 16 -   1914593 t--------t----g------a--at---tat----A-----------A-A-----TA-A---A---
i Bubalus_bubalis.KI419065.1                            C 0 I 3
s Cacajao_ayresi.k141_724503                               113785 22 -    171031 T--------T----TT-----A--AC---TAT----A-TA--------A-A-----AA-A---AATC
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 12816 23 +    125063 T--------T----TTT----A--AC---TAT----A-TA--------A-A-----AA-A---AATC
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                14858 22 -    216513 T--------T----TT-----A--AC---TAT----A-TA--------A-A-----AA-A---AATC
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        7401 22 -    134917 T--------T----TT-----A--AC---TAT----A-TA--------A-A-----AA-A---AATC
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3219339 16 -   8989139 t--------g----a------a--at---tat----a-----------a-a-----ta-a---a---
i Camelus_bactrianus.KN276303.1                         C 0 I 3
s Camelus_dromedarius.KN271192.1                           397041 16 -  15254737 t--------g----a------a--at---tat----a-----------a-a-----ta-a---a---
i Camelus_dromedarius.KN271192.1                        C 0 I 3
s Camelus_ferus.KB016973.1                                2972776 16 +   6889770 t--------g----a------a--at---tat----a-----------a-a-----ta-a---a---
i Camelus_ferus.KB016973.1                              C 0 I 3
s CanFam4.chr31                                          11519253 14 +  39901454 T--------T----G------A--AT---TAT----A-----------A-A-----TA---------
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   14278 14 +     87036 T--------T----G------A--AT---TAT----A-----------A-A-----TA---------
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11265920 14 -  35597290 t--------t----g------a--at---tat----a-----------a-a-----ta---------
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11088454 14 +  39895921 t--------t----g------a--at---tat----a-----------a-a-----ta---------
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16455469 14 -  44759192 t--------t----g------a--at---tat----a-----------a-a-----ta---------
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21324960 16 + 157394656 t--------g----g------A--AT---TAT----A-----------A-A-----TA-A---A---
i Capra_aegagrus.CM003214.1                             C 0 I 3
s Capra_hircus.CM004562.1                               135706187 16 - 157403528 t--------g----G------A--AT---TAT----A-----------A-A-----TA-A---A---
i Capra_hircus.CM004562.1                               C 0 I 3
s Carlito_syrichta.NW_007248099.1                          308835 17 +    345090 t--------t----g------a--at---tat----a-----------a-a-----ta-a---a--t
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               59292 13 +     67245 ---------------------T--AT---TAT----A-----------A-A-----TA-A---A---
i Carollia_perspicillata.CarPer_scaffold_4436           I 2 I 3
s Castor_canadensis.CasCan_scaffold_47037                   30498 19 +     33760 T--------T----TT----GA--AT---TAT----A-----------A-A-----TA-A---A--C
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   158648 16 -    276539 T--------G----A------A--AT---TAT----A-----------A-A-----TA-A---A---
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 I 3
s Cavia_aperea.AVPZ01000278.1                            15786366 14 -  24422027 ---------------------a--aa---tac----a-----------a-a-----ga-a---a--c
i Cavia_aperea.AVPZ01000278.1                           I 1 C 0
s Cavia_porcellus.DS562889.1                             15798302 14 -  24440124 ---------------------a--aa---tac----a-----------a-a-----ga-a---a--c
i Cavia_porcellus.DS562889.1                            I 1 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       176493 14 +    436027 ---------------------A--AA---TAC----A-----------A-A-----GA-A---A--C
i Cavia_tschudii.CavTsc_scaffold_488                    I 1 C 0
s Cebus_albifrons.Contig22                               18890637 19 -  29618158 T--------T----T------A--AT---TAT----AA-A--------A-A-----AA-A---A--C
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 8181 19 -     26817 T--------T----T------A--AT---TAT----AA-A--------A-A-----AA-A---A--C
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                12421 19 +     25043 T--------T----T------A--AT---TAT----AA-A--------A-A-----AA-A---A--C
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         7870 17 +     21754 T--------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--T
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4363646 16 +   7569818 t--------t----g------a--at---tac----a-----------A-A-----TA-A---A---
i Ceratotherium_simum.JH767818.1                        C 0 I 3
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         3403 16 -      9338 T--------T----G------A--AT---TAC----A-----------A-A-----TA-A---A---
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 I 3
s Cercocebus_atys.KQ010443.1                              6555077 18 +   6739814 t-------tt----g------a--at---tat----a-----------a-a-----ta-a---a--C
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      26554 18 +     60454 TT-------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          1759 19 -     21101 TTT------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         59069 18 -    107033 TT-------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        1960 17 -     17608 T--------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          29456 17 +     30494 T--------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          58301 17 -     59240 T--------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          2002 17 +     16677 T--------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           24161 17 +     35983 T--------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11990688 17 +  12117833 T--------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46477447 17 +  46592721 T--------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      40998 17 -     45581 T--------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       2003 17 +     35577 T--------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        1779 17 -     25661 T--------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        1758 17 -     17744 T--------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        21374 17 +     37128 T--------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           2562 14 -      6963 ---------------------A--AT---TAT----A-----------A-A-----TA-A---A--T
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      I 2 I 52
s Cheirogaleus_major.k141_1157592                           58838 17 -     68416 T--------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            7882 17 +     13308 T--------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             5447 20 -     18223 T--------A----T------A--TA---TATT---AA---------GA-A-----AA-A---A--C
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             22468 20 +     25473 T--------A----T------A--CA---TATT---AA---------GA-A-----AA-A---A--C
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           41505 20 +     57117 T--------A----T------A--TA---TATT---AA---------GA-A-----AA-A---A--C
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          46184 20 +     54541 T--------A----T------A--TA---TATT---AA---------GA-A-----AA-A---A--C
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15961535 14 +  43084221 ---------------------t--at---tac----a-----------a-A-----GA-A---A--C
i Chinchilla_lanigera.JH721867.1                        I 1 C 0
s Chiropotes_israelita.k141_1189915                         70991 20 +    196370 T--------T----TT-----A--AT---TAT----A-TA--------A-A-----AA-A---A--C
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          15171 20 +     40510 T--------T----T--A---A--AT---TAT----A-TA--------A-A-----AA-A---A--C
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15138924 19 -  15256731 TTT------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      33972 19 -     53260 TTT------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101144532 19 + 101219884 t------ttt----g------a--at---tat----a-----------a-a-----ta-a---a--C
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                16257 17 -     21363 T--------T----T------A--AT---TAT----A-----------A-A-----TA-A---A--T
i Choloepus_didactylus.ChoDid_scaffold_36182            I 1 C 0
s Choloepus_hoffmanni.KN194586.1                           761565 17 +    964067 t--------t----t------a--at---tat----a-----------a-a-----ta-a---a--t
i Choloepus_hoffmanni.KN194586.1                        I 2 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_3549804              179 17 -       354 T--------A----A------G--AG---TCT----A-----------A-A-----TA-A---A--C
i Chrysochloris_asiatica.ChrAsi_scaffold_3549804        C 0 I 2
s Colobus_angolensis.KN985967.1                          10886303 17 +  10971483 t--------t----g------a--at---tat----a-----------a-a-----ta-a---a--C
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147664469 17 + 156195979 T--------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            16454 17 +     23629 T--------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60613375 16 +  78930452 t--------t----t------a--at---tat----a-----------a-a-----ta-a---a---
i Condylura_cristata.JH655880.1                         C 0 I 3
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         39470 16 -     40477 T--------T----A------A--AT---TAT----A-----------A-A-----TA-A---A---
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 I 3
s Cricetomys_gambianus.CriGam_scaffold_949                 278333 17 -    399297 T--------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53029016 17 +  72327488 T--------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_88140              1934 16 +     11655 T--------T----G------A--AT---TAT----C-----------A-G-----TA-A---A---
i Crocidura_indochinensis.CroInd_scaffold_88140         C 0 I 3
s Cryptoprocta_ferox.CryFer_flattened_line_19014            51792 14 -     70449 T--------T----G------A--AT---TAT----A-----------A-A-----TA---------
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  207928 17 -    956709 T--------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 30510 14 -     67205 ---------------------A--AT---TAC----A-----------A-A-----GT-A---A--C
i Ctenomys_sociabilis.CteSoc_scaffold_19489             I 1 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                17552 14 +     26546 ---------------------A--AT---TAC----A-----------A-A-----GG-A---A--C
i Cuniculus_paca.CunPac_flattened_line_16637            I 1 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             58641 14 -    236241 ---------------------A--AA---TAC----A-----------A-A-----GA-A---A--C
i Dasyprocta_punctata.DasPun_flattened_line_634         I 1 C 0
s Dasypus_novemcinctus.JH568778.1                          183449 14 -   6883506 ---------------------G--AT---TAT----A-----------A-A-----TA-A---A--T
i Dasypus_novemcinctus.JH568778.1                       I 2 C 0
s Daubentonia_madagascariensis.ctg11                     16844693 17 +  31942871 T--------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80036591 16 -  96802777 t--------g----a------a--at---tat----a-----------a-a-----ta-a---a---
i Delphinapterus_leucas.KZ290064.1                      C 0 I 3
s Desmodus_rotundus.KZ672188.1                           18698567 13 -  18957592 ---------------------a--at---tat----a-----------a-a-----ta-a---a---
i Desmodus_rotundus.KZ672188.1                          I 2 I 3
s Dicerorhinus_sumatrensis.PEKH010003161.1                 322295 16 +    993696 t--------t----g------a--aT---TAC----A-----------A-A-----TA-A---A---
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 I 3
s Diceros_bicornis.DicBicMic_scaffold_9545                   2948 16 +    151128 T--------T----G------A--AT---TAC----A-----------A-A-----TA-A---A---
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 I 3
s Dinomys_branickii.DinBra_scaffold_1996                   156788 14 +    228994 ---------------------T--AT---TAT----A-----------A-A-----GA-A---A--C
i Dinomys_branickii.DinBra_scaffold_1996                I 1 C 0
s Dipodomys_ordii.KN672545.1                              3656104 17 +   4240102 T--------t----g------a--at---tct----a-----------a-a-----ta-a---a--a
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 27737 17 +     28912 T--------T----G------A--AT---TCT----A-----------A-A-----TA-A---A--A
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                35891 14 -     73477 ---------------------A--AA---TAC----A-----------A-A-----GA-A---A--C
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22998304 14 -  44670279 ---------------------C--AT---TAT----A-----------A-A-----TA-A---A--C
i Echinops_telfairi.JH980316.1                          I 2 I 2
s Eidolon_helvum.KE772537.1                                 11998 16 +     24177 t--------t----g------a--at---tac----a-----------a-A-----TA-A---A---
i Eidolon_helvum.KE772537.1                             C 0 I 3
s Elaphurus_davidianus.JRFZ01086400.1                     1491237 16 +   1727528 t--------g----g------A--AT---TCT----A-----------A-A-----TA-A---A---
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 I 3
s Elephantulus_edwardii.JH947210.1                        7815713 16 +  15467074 ---------A----A------A--CT---TAT----A-----------C-A-----TA-A---A--C
i Elephantulus_edwardii.JH947210.1                      C 0 I 7
s Ellobius_lutescens.LOEQ01003611.1                        239563 17 -    369425 T--------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           6676 17 -      7838 T--------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85871959 14 +  99434291 t--------g----g------a--at---tat----a-----------A-A-----TA---------
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4703944 18 +   6522550 t------ttt----a------a--at---tat----a-----------a-a-----ta-a---a---
i Eptesicus_fuscus.JH977687.1                           C 0 I 3
s Equus_asinus.JREZ01000062.1                             5852747 16 -   7175178 T--------T----G------A--AT---TAC----A-----------A-A-----TA-A---A---
i Equus_asinus.JREZ01000062.1                           C 0 I 3
s Equus_caballus.CM000402.2                              13351250 16 +  41866177 T--------T----G------A--AT---TAC----A-----------A-A-----TA-A---A---
i Equus_caballus.CM000402.2                             C 0 I 3
s Equus_przewalskii.ATBW01073585.1                          12740 16 +     92910 t--------t----g------a--at---taC----A-----------A-A-----TA-A---A---
i Equus_przewalskii.ATBW01073585.1                      C 0 I 3
s Erythrocebus_patas.Contig8                             48771099 17 -  48907691 T--------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Erythrocebus_patas.Contig8                            C 0 I 37
s Eschrichtius_robustus.EscRob_flattened_line_685          314807 16 +    330699 T--------G----A------A--AT---TAT----A-----------A-A-----TA-A---A---
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 I 3
s Eubalaena_japonica.EubJap_flattened_line_7756             61259 16 +     89355 T--------G----A------A--AT---TAT----A-----------A-A-----TA-A---A---
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 I 3
s Eulemur_albifrons.k141_715837                              4894 18 +     13586 TT-------T----G------A--GT---TAT----A-----------A-A-----TA-A---A--C
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               4825 18 -      6809 TT-------T----G------A--GT---TAT----A-----------A-A-----TA-A---A--C
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            11302 18 +     36558 TT-------T----G------A--GT---TAT----A-----------A-A-----TA-A---A--C
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             7623 18 +     60246 TT-------T----G------A--GT---TAT----A-----------A-A-----TA-A---A--C
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                11099 18 +    109717 TT-------T----G------A--GT---TAT----A-----------A-A-----TA-A---A--C
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               15485 18 +     16540 TT-------T----G------A--GT---TAT----A-----------A-A-----TA-A---A--C
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                15760 18 +     27497 TT-------T----G------A--GT---TAT----A-----------A-A-----TA-A---A--C
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           18217 18 +     26808 TT-------T----G------A--GT---TAT----A-----------A-A-----TA-A---A--C
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                32951 22 +     46535 TTTTTT---T----G------A--GT---TAT----A-----------A-A-----TA-A---A--C
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              15679 18 -     29447 TT-------T----G------A--GT---TAT----A-----------A-A-----TA-A---A--C
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129892717 14 - 159252932 t--------t----g------a--at---tat----a-----------A-A-----TT---------
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129279804 14 - 158578461 t--------t----g------a--at---tat----a-----------A-A-----TT---------
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 20949 14 +     52776 T--------T----G------A--AT---TAT----A-----------A-A-----TT---------
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Galago_moholi.ctg555                                     210720 18 -    847004 GT-------T----T------T--TT---TTT----A-----------A-A-----TA-A---A--C
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           13095 17 -     43889 T--------T----T------T--TT---TTA----A-----------A-A-----TA-A---A--C
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          10167 17 +     27357 T--------T----T------T--TT---TTT----A-----------A-A-----TA-A---A--C
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               156070 17 +    324696 T--------T----G------A--GT---TAT----A-----------A-A-----TA-A---A--C
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    181037 16 -    189561 t--------g----g------a--at---tat----a-----------a-a-----ta-a---a---
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 I 3
s Glis_glis.GliGli_scaffold_79770                           12864 17 -     18683 T--------T----T------A--AT---TAC----A-----------A-A-----TG-A---A--C
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               5158 17 -     14630 T--------T----G------G--AT---TAT----A-----------A-A-----TA-A---A--C
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119652257 17 - 195582420 T--------T----G------G--AT---TAT----A-----------A-A-----TA-A---A--C
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   77409 18 +    118900 T--------T----T-----GA--AT---TAT----A-----------A-A-----TA-A---A--C
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 I 35
s Hapalemur_alaotrensis.k141_1280836                         1671 17 +     10286 T--------T----G------A--GT---TAT----A-----------A-A-----TA-A---A--C
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                              148 17 -     11661 T--------T----G------A--GT---TAT----A-----------A-A-----TA-A---A--C
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             5477 17 +     56096 T--------T----G------A--GT---TAT----A-----------A-A-----TA-A---A--C
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        28727 17 -     42470 T--------T----G------A--GT---TAT----A-----------A-A-----TA-A---A--C
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        45350 17 -     54384 T--------T----G------A--GT---TAT----A-----------A-A-----TA-A---A--C
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              16999 14 +     53719 T--------T----G------A--AT---TAT----A-----------A-A-----TA---------
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                27230 16 -     91191 T--------A----G------A--AT---TAT----A-----------A-A-----TA-A---A---
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 I 3
s Heterocephalus_glaber.JH602058.1                        2550872 17 +  31725842 T--------T----G------A--AT---TAC----A-----------A-A-----TA-A---G--C
i Heterocephalus_glaber.JH602058.1                      C 0 I 46
s Heterohyrax_brucei.HetBruBak_scaffold_25354               60425 10 +     73687 T--------A----A------A--AT---TAT----A------------------------------
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 I 9
s Hippopotamus_amphibius.HipAmp_scaffold_1308              146885 16 +    277961 T--------G----A------A--AT---TAT----A-----------A-A-----TA-A---A---
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 I 3
s Hipposideros_armiger.JXIK01001085.1                      278166 16 -    477199 t--------t----g------a--aT---TAC----A-----------A-A-----TA-A---A---
i Hipposideros_armiger.JXIK01001085.1                   C 0 I 3
s Hipposideros_galeritus.HipGal_scaffold_104691              7311 16 -      9143 T--------T----A------A--AT---TAC----A-----------A-A-----TA-A---A---
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 I 3
s Hoolock_leuconedys.ctg79                                      4565 17 -   7690867 T--------T----G------G--AT---TAT----A-----------A-A-----TA-A---A--C
i Hoolock_leuconedys.ctg79                                 C 0 I 271
s Hyaena_hyaena.HyaHya_flattened_line_20729                 17069 14 -     67322 T--------T----G------A--AT---TAT----A-----------A-A-----TA---------
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           18754 14 -    119109 ---------------------A--AA---TAC----A-----------A-A-----GA-A---A--C
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       I 1 C 0
s Hylobates_abbotti.k141_493872                              4988 17 +      5897 T--------T----G------G--AT---TAT----A-----------A-A-----TA-A---A--C
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_624065                               1854 17 +      2112 T--------T----G------G--AT---TAT----A-----------A-A-----TA-A---A--C
i Hylobates_agilis.k141_624065                          C 0 C 0
s Hylobates_klossii.k141_285563                                33 17 +      1026 T--------T----G------G--AT---TAT----A-----------A-A-----TA-A---A--C
i Hylobates_klossii.k141_285563                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14624535 17 -  25970782 T--------T----G------G--AT---TAT----A-----------A-A-----TG-A---A--C
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            1790 17 -      2977 T--------T----G------G--AT---TAT----A-----------A-A-----TA-A---A--C
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             33710  1 -     60944 ------------------------------------------------------------------c
i Hylobates_pileatus_a.tarseq_592                         I 319 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     5930 17 +     22540 T--------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7125639 13 +  13083262 ------------------------at---tat----a-----------a-a-----ta-a---a--c
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_5141390                                    183 21 -      3181 TTTTT----T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Indri_indri.k141_5141390                              I 72 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               8796 16 +     17520 T--------G----A------A--AT---TAT----A-----------A-A-----TA-A---A---
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 I 3
s Jaculus_jaculus.JH725517.1                              8565680 17 +  11848649 t--------t----a------a--at---tat----a-----------a-a-----ta-a---a--c
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               23417 11 +     37189 -------------------------T---TAT----A-----------A-A-----TA-A---A---
i Kogia_breviceps.KogBre_flattened_line_35920           I 3 I 3
s Lagothrix_lagothricha.k141_12968                          50024 19 -    147782 T--------T----T------A--AT---TAT----AA-A--------A-A-----AA-A---C--T
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   114037 12 -    115756 ------------------------AT---CAT----A-----------A-A-----TA-A---A---
i Lasiurus_borealis.LasBor_scaffold_5102                I 3 I 3
s Lemur_catta.scaffold_1                                258407032 18 - 285822530 TT-------T----G------A--GT---TAT----A-----------A-A-----TA-A---A--C
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        23778 16 +     39228 ---------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            53162 16 +     63517 ---------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        78422 17 +    116806 T--------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     31417 16 -     33031 ---------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3085763 14 -   3498232 t--------t----g------a--at---tat----a-----------a-a-----ta---------
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    13040 17 +     22452 T--------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            135752 16 +   3060487 t--------g----a------a--at---taa----a-----------a-a-----ta-a---a---
i Lipotes_vexillifer.KE558548.1                         C 0 I 3
s Lophocebus_aterrimus.ctg55                             19248171 18 +  19376315 TT-------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           10479 15 +     84689 TT-------T----T------T--T------T----A-----------A-A-----TA-A---A--C
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3778229 15 +   6799190 TT-------T----T------T--T------T----A-----------A-A-----TA-A---A--C
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20594006 17 -  62548349 a--------a----a------a--at---tat----a-----------a-a-----ta-a---a--c
i Loxodonta_africana.GL010040.1                         C 0 I 2
s Lycaon_pictus.CM007556.1                               11087910 14 +  39895028 t--------t----g------a--at---tat----a-----------a-a-----ta---------
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             19907 18 +     74745 TT-------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12706363 18 +  12821369 TT-------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                2005 18 -      3136 TT-------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           46823 18 +     63263 TT-------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                 1528 18 -      2568 TT-------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 2113 18 -      7381 TT-------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  45330 18 -     79256 TT-------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196035437 18 + 196197964 t-------tt----g------a--at---tat----a-----------a-a-----ta-a---a--C
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11445607 18 +  11645122 t-------tt----g------a--at---tat----a-----------a-a-----ta-a---a--C
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   4277 18 -     46448 TT-------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                1951 18 -     13212 TT-------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 15630 18 -     55006 TT-------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43840748 16 +  43892939 ---------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               16916 18 -     24607 TT-------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               4282 18 -     27140 TT-------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                701371 16 +    802869 T--------T----G------A--AT---TAT----A-----------A-A-----TA-A---A---
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 I 3
s Mandrillus_leucophaeus.scaffold125                     43437331 18 -  43563597 TT-------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4450151 18 -   4543643 TT-------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            145400 16 +    252755 t--------t----g------a--at---tat----a-----------a-a-----ta-a---a---
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             35477 16 +     58827 t--------t----g------a--at---tat----a-----------a-a-----ta-a---a---
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36873479 13 +  64221397 ------------------------at---tat----a-----------a-a-----ta-a---a--c
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       64189 16 -    234502 T--------T----G------A--AT---TAT----A-----------A-A-----GA-A---A---
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 I 3
s Mellivora_capensis.MelCap_flattened_line_15433              767 14 -     87323 T--------G----G------A--AT---TAT----A-----------A-A-----TA---------
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               12532 17 +     15977 T--------T----A------A--AT---TAT----A-----------A-A-----TG-A---A--C
i Meriones_unguiculatus.MerUng_scaffold_52233           I 4 C 0
s Mesocricetus_auratus.KB708139.1                         1046725 17 -  26018355 T--------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_227248                     86 16 -      1377 T--------G----A------A--AT---TAT----A-----------A-A-----TA-A---A---
i Mesoplodon_bidens.MesBid_scaffold_227248              C 0 I 3
s Microcebus_murinus.CM007691.1                          16510048 17 +  47401472 t--------t----g------a--at---tat----a-----------a-a-----ta-a---a--c
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  34282 10 -     48017 ------------------------------CT----A-----------A-A-----TA-A---A--C
i Microgale_talazaci.MicTal_scaffold_34660              I 3 I 2
s Micronycteris_hirsuta.MicHir_scaffold_37978               22473 13 -     32043 ---------------------A--AT---TAT----A-----------A-A-----TA-A---A---
i Micronycteris_hirsuta.MicHir_scaffold_37978           I 2 I 3
s Microtus_ochrogaster.CM001673.1                        22819862 17 -  98408828 t--------t----g------a--at---tat----a-----------a-a-----ta-a---a--C
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8209466 16 +  10048721 t--------t----g------a--at---tat----a-----------a-a-----ta-a---a---
i Miniopterus_natalensis.LDJU01000022.1                 C 0 I 3
s Miniopterus_schreibersii.MinSch_scaffold_24116            34120 16 +     45743 T--------T----G------A--AT---TAT----A-----------A-A-----TA-A---A---
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 I 3
s Miopithecus_ogouensis.k141_2935907                         1880 17 +     29742 T--------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        11276 14 -    104932 T--------T----G------A--AT---TAT----A-----------A-A-----TA---------
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     5437 17 +      8497 T--------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 146181 16 +    154973 T--------G----A------A--AT---TAT----A-----------A-A-----TA-A---A---
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 I 3
s Mormoops_blainvillei.MorMeg_scaffold_2952                160994 16 +    265003 T--------T----G------A--AT---TAG----A-----------A-A-----TA-A---A---
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 I 3
s Moschus_moschiferus.MosMos_scaffold_78805                  1261 16 -     19904 T--------G----G------A--AT---TAT----A-----------A-A-----TA-A---A---
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 I 3
s Mungos_mungo.MunMun_flattened_line_8729                  144694 14 -    168139 T--------T----G------A--AT---TAT----A-----------A-A-----TA---------
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          19318 12 -    100666 ------------------------AT---TAT----A-----------A-A-----TA-A---A---
i Murina_feae.MurFea_scaffold_2254                      I 3 I 3
s Mus_caroli.LT608236.1                                  70766366 17 +  92629107 t--------t----t------a--at---tat----a-----------a-a-----ta-a---a--c
i Mus_caroli.LT608236.1                                 I 4 C 0
s Mus_musculus.chr16                                     75489425 17 +  98207768 t--------t----t------a--at---tat----a-----------a-a-----ta-a---a--c
i Mus_musculus.chr16                                    I 4 C 0
s Mus_pahari.LT608305.1                                  67555653 17 +  89017189 t--------t----t------a--at---tat----a-----------a-a-----ta-a---a--c
i Mus_pahari.LT608305.1                                 I 4 C 0
s Mus_spretus.CM004110.1                                 74330602 17 +  97876770 t--------t----t------a--at---tat----a-----------a-a-----ta-a---a--c
i Mus_spretus.CM004110.1                                I 4 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             11636 17 +     98495 T--------T----T------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4424136 14 -  28371801 t--------g----g------a--at---taT----A-----------A-A-----TA---------
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     89790 14 -    117718 ---------------------A--AC---TTC----A-----------A-A-----GC-A---A--C
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 1 C 0
s Myotis_brandtii.KE161952.1                               967625 16 +   8389877 t--------t----a------a--at---tat----a-----------a-a-----ta-a---a---
i Myotis_brandtii.KE161952.1                            C 0 I 3
s Myotis_davidii.KB114863.1                               5019302 16 +   6462685 t--------t----a------a--at---tat----a-----------a-a-----ta-a---a---
i Myotis_davidii.KB114863.1                             C 0 I 3
s Myotis_lucifugus.GL429887.1                             3465207 16 -   3747815 t--------t----t------a--at---tat----a-----------a-a-----ta-a---a---
i Myotis_lucifugus.GL429887.1                           C 0 I 3
s Myotis_myotis.MyoMyo_scaffold_6123                        10420 16 +     66751 T--------T----A------A--AT---TAT----A-----------A-A-----TA-A---A---
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 I 3
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             4822 21 -      8794 T--------AAAAAA------A--TT---TAT----A-----------A-A-----TA-C---A--T
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        I 1 C 0
s Nannospalax_galili.KL201303.1                            118470 17 +    362372 T--------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Nannospalax_galili.KL201303.1                         C 0 I 8
s Nasalis_larvatus.k141_153429                               8384 21 +     48152 TTTTT----T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4484668 14 -  14209539 t--------t----g------a--at---tat----a-----------a-a-----ta---------
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3950793 16 -   4490290 t--------g----a------a--at---tat----a-----------a-a-----ta-a---a---
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 I 3
s Noctilio_leporinus.NocLep_scaffold_12062                  49088 16 +     94413 T--------T----G------A--AT---TAT----A-----------A-A-----TA-A---A---
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 I 3
s Nomascus_annamensis.k141_220265                             300 17 +      1763 T--------T----G------G--AT---TAT----A-----------A-A-----TA-A---A--C
i Nomascus_annamensis.k141_220265                       C 0 I 141
s Nomascus_concolor.k141_226614                              1093 17 -      5092 T--------T----G------G--AT---TAT----A-----------A-A-----TA-A---A--C
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_39679                               61 17 -     17937 T--------T----G------G--AT---TAT----A-----------A-A-----TA-A---A--C
i Nomascus_gabriellae.k141_39679                        C 0 C 0
s Nomascus_siki_b.tarseq_80                             24811 17 -  18771707 T--------T----G------G--AT---TAT----A-----------A-A-----TA-A---A--C
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  2514 17 +      4512 T--------T----G------G--AT---TAT----A-----------A-A-----TA-A---A--C
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                30711 14 +   3668941 t--------t----g------a--at---tat----a-----------a-a-----ta---------
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65566904 29 -  95554990 T-------AA----A------A--A-AAA--T----AATAATAATAATA-A-----TA-A---A--C
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            3633 26 +      6470 T-------AA----A------A--A------A----AATAATAATAATA-A-----TA-A---A--C
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65669237 26 +  89412551 T-------AA----A------A--A------T----AATAATAATAATA-A-----TA-A---A--C
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4995790 16 -  23139505 ---------T----G------A--CT---TAT----A-----------A-A-----TA-A---A--C
i Ochotona_princeps.JH802095.1                          I 6 C 0
s Octodon_degus.JH651621.1                                3685346 14 +  10294119 ---------------------A--AT---TAG----A-----------A-A-----GT-A---A--C
i Octodon_degus.JH651621.1                              I 1 C 0
s Odobenus_rosmarus.KB229369.1                             679331 14 -   3126709 t--------t----g------a--at---tat----a-----------a-a-----ta---------
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1079468 16 +   1425656 t--------a----g------a--at---tct----A-----------A-A-----TA-A---A---
i Odocoileus_virginianus.KZ101650.1                     C 0 I 3
s Okapia_johnstoni.LVCL01S0017931.1                         36765 16 +     78940 t--------g----g------a--at---tat----a-----------a-a-----ta-a---a---
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 I 3
s Ondatra_zibethicus.OndZib_scaffold_6821                  125115 17 +    145789 T--------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  36915 17 +     62360 T--------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7224478 16 -   7562323 t--------g----a------a--at---tat----a-----------a-a-----ta-a---a---
i Orcinus_orca.KB316965.1                               C 0 I 3
s Orycteropus_afer.OryAfe_flattened_line_13509              57320 17 -     66828 T--------A----A------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 I 2
s Oryctolagus_cuniculus.CM000803.1                      141876074 17 + 163896628 t--------t----g------a--at---tat----a-----------a-a-----ta-a---a--C
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      307997 14 -    505867 t--------t----g------a--at---tat----a-----------a-a-----ta---------
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                         537 14 -     53940 ---------------------T--TT---TTT----A-----------A-A-----TA-A---A--C
i Otolemur_crassicaudatus.k141_505435                   I 1 C 0
s Otolemur_garnettii.GL873528.1                          18008507 24 -  38779656 t-tttttttt----t------t--tt---ttt----a-----------a-a-----ta-a---a--c
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134077026 16 - 275406953 t--------a----g------a--at---tat----a-----------a-a-----ta-a---a---
i Ovis_aries.CM001582.2                                 C 0 I 3
s Ovis_canadensis.OviCan_scaffold_6251                      78240 16 +    140051 T--------A----G------A--AT---TAT----A-----------A-A-----TA-A---A---
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 I 3
s Pan_paniscus.AJFE02000033.1                                 712 17 -      1012 T--------T----G------G--AT---TAT----A-----------A-A-----TA-A---A--C
i Pan_paniscus.AJFE02000033.1                           I 212 n 17
s Pan_troglodytes.CM009241.2                            120151677 18 - 196562556 t-------tt----g------g--at---TAT----A-----------A-A-----TG-A---A--C
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  34110 14 +    295523 T--------T----G------A--AT---TAG----A-----------A-A-----TT---------
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3637846 14 +  18214204 t--------t----g------a--at---tag----a-----------A-A-----TT---------
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5027519 14 -   6340057 t--------t----g------a--at---tag----a-----------A-A-----TT---------
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1065886 16 -   1292953 t--------g----g------a--at---tat----a-----------a-a-----ta-a---a---
i Pantholops_hodgsonii.KE114631.1                       C 0 I 3
s Papio_anubis.CM001492.2                               188156118 18 - 188283584 t-------tt----g------a--at---tat----a-----------a-a-----ta-a---a--C
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             4435 18 +      5367 TT-------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47513503 18 +  47705337 TT-------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 67479 18 -    104429 TT-------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    6015 18 +     14967 TT-------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 1874 18 -      7628 TT-------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    115572 14 -    135482 T--------T----G------A--AT---TAT----A-----------A-A-----TA---------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           5229 14 -     23713 A--------A----A------T--A------T----A-----------T-A-----TA-A---G--C
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            24541 14 -     27972 A--------T----A------T--A------T----A-----------T-A-----TA-A---G--C
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      44361 17 -     45160 T--------T----G------A--AT---TCT----A-----------A-A-----TA-A---A--A
i Perognathus_longimembris.PerPac_flattened_line_22291  I 2 C 0
s Peromyscus_maniculatus.KI615518.1                       4950152 17 -   8017169 T--------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    12262 17 -     36578 T--------T----G------A--AT---TAC----A-----------A-A-----TT-A---A--C
i Petromus_typicus.PetTyp_scaffold_33007                C 0 I 41
s Phocoena_phocoena.PhoPho_flattened_line_11948            121083 16 -    122454 T--------G----A------A--AT---TAT----A-----------A-A-----TA-A---A---
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 I 3
s Piliocolobus_badius.k141_1987485                           1903 17 -      5908 T--------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       2527 17 -     17985 T--------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            1894 17 +      7694 T--------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26740372 17 +  26888534 t--------t----g------a--at---tat----a-----------a-a-----ta-a---a--C
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            97255 18 +    112873 TTT------T----T------A--AT---TAT----A-----------A-A-----TA-A---A---
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        I 11 I 3
s Pithecia_albicans.k141_991845                             43626 23 -     61926 t--------g----t------a--at---tat----A-TAA-AA-A--A-A-----AA-A---A--C
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        25011 23 +     78826 T--------G----T------A--AT---TAT----A-TAA-AA-A--A-A-----AA-A---A--C
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              9059 22 -     15800 T--------G----T------A--AT---TAT----A-TAA-AA----A-A-----AA-A---A--C
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        12258 22 -     16101 T--------G----T------A--AT---TAT----A-TAA-AA----A-A-----AA-A---A--C
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          5487 19 +      9673 T--------G----T------A--AT---TAT----A-TAA-AA----A-A-----AA---------
i Pithecia_pissinattii.k141_1102319                     C 0 I 2
s Pithecia_pithecia.tarseq_313                           13474485 23 -  19735023 T--------G----T------A--AT---TAT----A-T--TAA-AA-A-A-----AA-A---A--C
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           13390 22 -     31692 T--------G----T------A--AT---TAT----A-TAA-AA----A-A-----AA-A---A--C
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           5170 16 +     21690 T--------G----A------A--AT---TAT----A-----------A-A-----TA-A---A---
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 I 3
s Plecturocebus_bernhardi.k141_959214                       22730 21 +     44506 T--------A----T------A--TA---TATT---AA-A--------A-AA----AA-A---A--C
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        22943 20 +     67491 T--------A----T------A--TA---TA-T---TA-A--------A-AA----AA-A---A--C
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      13182 21 -     98129 T--------A----T------A--TA---TATT---AA-A--------A-AA----AA-A---A--C
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     22782 21 +    147771 T--------A----T------A--TA---TATT---AA-A--------A-AA----AA-A---A--C
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        23037 21 -     23762 T--------A----T------A--TA---TATT---TA-A--------A-AA----AA-A---A--C
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          3503 18 -     55515 T--------A----T------A--TA---TATT---AA-A--------A-AA----AA---------
i Plecturocebus_dubius.k141_3565563                     C 0 I 1
s Plecturocebus_grovesi.k141_242819                         22856 18 +    152463 T--------A----T------A--TA---TATT---AA-A--------A-AA----AA---------
i Plecturocebus_grovesi.k141_242819                     C 0 I 2
s Plecturocebus_hoffmannsi.k141_985533                        573 19 -    119457 T--------A----T------A--TA---TATT---AA-A--------A-AA----AA-A-------
i Plecturocebus_hoffmannsi.k141_985533                  C 0 I 1
s Plecturocebus_miltoni.k141_841561                         12578 21 +    134592 T--------A----T------A--TA---TATT---AA-A--------A-AA----AA-A---A--C
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          23166 18 -     75465 T--------A----T------A--TA---TATT---AA-A--------A-AA----AA---------
i Plecturocebus_moloch.k141_890597                      C 0 I 2
s Pongo_abelii.NDHI03003816.1                              187046 17 -    373494 T--------T----G------G--AT---TAT----A-----------A-A-----TA-A---A--C
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19807694 17 +  19899266 T--------T----G------G--AT---TAT----A-----------A-A-----TA-A---A--C
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               5632 21 -     15069 TTTTT----T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              5767 16 +     14865 ---------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Presbytis_mitrata.k141_860013                         I 5 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                1515 10 -      9567 T--------A----A------A--AT---TAT----A------------------------------
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 I 9
s Prolemur_simus.MPIZ01000048.1                           6848413 16 +  12164890 ---------t----g------a--gT---TAT----A-----------A-A-----TA-A---A--C
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coronatus.k141_1353159                         3470 17 +     11805 T--------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           42809 17 +     52369 T--------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         35195 17 -     44753 T--------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            17120 17 +     27322 T--------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       16757 16 -     53241 ---------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         39021 16 -     48185 ---------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           34058 17 +     77221 t--------t----t------a--at---tat----a-----------a-a-----ta-a---a--c
i Psammomys_obesus.NESX01026517.1                       I 4 C 0
s Pteronotus_parnellii.KE867983.1                            3639 14 -     27784 t--------t----g------a--at---tat----a-----------a-a-----ta---------
i Pteronotus_parnellii.KE867983.1                       C 0 I 4
s Pteronura_brasiliensis.PteBra_flattened_line_1343        246445 14 -    344369 T--------G----G------A--AT---TAT----A-----------A-A-----TA---------
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13245752 16 -  17261082 t--------t----g------a--at---tat----a-----------a-a-----ta-a---a---
i Pteropus_alecto.KB031157.1                            C 0 I 3
s Pteropus_vampyrus.KN525959.1                             603702 16 -   3946241 t--------t----g------a--at---tat----a-----------a-a-----ta-a---a---
i Pteropus_vampyrus.KN525959.1                          C 0 I 3
s Puma_concolor.QAVW01000427.1                          131534097 14 - 161321710 t--------t----g------a--at---tat----a-----------a-a-----tt---------
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             29750 21 +     56732 TTTTT----T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6806243 16 +   6970761 ---------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Pygathrix_nigripes_b.ctg79                               I 4 C 0
s Pygathrix_nigripes_a.k141_101123                             5634 16 +     18040 ---------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Pygathrix_nigripes_a.k141_101123                        I 5 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                15545 16 +     68503 T--------A----G------A--AT---TCT----A-----------A-A-----TA-A---A---
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 I 3
s Rattus_norvegicus.chr11                                13915366 17 +  90463843 t--------t----t------a--at---tat----a-----------a-a-----ta-a---a--c
i Rattus_norvegicus.chr11                               I 4 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1787587 16 +   2252614 t--------t----g------a--aT---TGT----A-----------A-A-----TA-A---A---
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 I 3
s Rhinopithecus_bieti.k119_554384                              31 21 -     17045 TTTTT----T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206377519 21 - 206558726 t----ttttt----g------a--at---tat----a-----------a-a-----ta-a---a--C
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44856422 21 -  45163003 TTTTT----T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                19077 16 +    109198 T--------T----G------A--AT---TAT----A-----------A-A-----TA-A---A---
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 I 3
s Saiga_tatarica.SaiTat_scaffold_82192                       7712 16 +     12214 T--------G----G------A--AT---TAT----A-----------A-G-----TA-A---A---
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 I 3
s Saimiri_boliviensis.NW_024100938.1                     15672592 22 -  43202129 a--------t----t------a--tt---aaa----a---------aaa-a-----aa-aaaaa--c
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        4509 10 +     34089 A--------T----T------A--TT---TAA----A------------------------------
i Saimiri_cassiquiarensis.k141_808270                   C 0 I 8
s Saimiri_macrodon.k141_2087127                              4450 19 -     60842 A--------T----T------A--TT---AAA----AA-A--------A-A-----AA-A---A--C
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              4556  6 +     67014 --------------------------------------------------A-----AA-A---A--C
i Saimiri_oerstedii.k141_841116                         I 11 C 0
s Saimiri_sciureus.k141_1947592                              4534  6 +     60816 --------------------------------------------------A-----AA-A---A--C
i Saimiri_sciureus.k141_1947592                         I 11 C 0
s Saimiri_ustus.k141_1282476                                 4471  6 -     76454 --------------------------------------------------A-----AA-A---A--C
i Saimiri_ustus.k141_1282476                            I 11 C 0
s Sapajus_apella.ctg10                                   17341181 19 -  30362882 T--------T----T------A--AT---TAT----AA-A--------A-A-----AA-A---A--C
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         20540 19 -     62485 T--------T----T------A--AT---TAT----AA-A--------A-A-----AA-A---A--C
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   32064 16 -    114521 T--------T----G------A--AT---TAT----A-----------A-A-----TA-A---A---
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 I 3
s Semnopithecus_entellus.k141_1572367                        3243 21 +     15331 TTTTT----T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       8638 21 +     20762 TTTTT----T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         118640 22 +    130994 TTTTTT---T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           37427 21 +     46263 TTTTT----T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     30541 25 +     42640 TTTTTTTTTT----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        13586 21 +     30600 TTTTT----T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Semnopithecus_vetulus.k141_1143185                    I 1 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  100099 17 -    120886 T--------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            18639 16 +    739146 T--------T----G------G--CT---TAT----A-----------A-A-----TA-A---A---
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2239555 13 +   2842873 ------------------------at---tat----a-----------a-a-----ta-a---a--c
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             234566 14 -    276980 T--------T----G------A--AT---TAT----A-----------A-A-----TA---------
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            27356 14 +     62062 T--------T----G------A--AT---TAT----A-----------A-A-----TA---------
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189271624 16 + 218635234 t--------g----a------a--at---tat----a-----------a-a-----ta-a---a---
i Sus_scrofa.CM000824.4                                 C 0 I 3
s Symphalangus_syndactylus.tarseq_24                        14796 17 -  13920577 T--------T----G------G--AT---TAT----A-----------A-A-----TA-A---A--C
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               6038 16 -      6213 T--------T----T------A--AT---TAT----A-----------A-A-----TA-A---A---
i Tadarida_brasiliensis.TadBra_scaffold_145589          C 0 I 3
s Tamandua_tetradactyla.TamTet_scaffold_26877               14485 21 +     45698 A--------GAAAAA------A--AT---TAT----A-----------A-A-----TA-C---A--T
i Tamandua_tetradactyla.TamTet_scaffold_26877           I 1 C 0
s Tapirus_indicus.TapInd_scaffold_176                      806901 16 +   1148477 T--------T----G------A--AC---TAC----A-----------A-A-----TA-A---A---
i Tapirus_indicus.TapInd_scaffold_176                   C 0 I 3
s Tapirus_terrestris.TapTer_scaffold_14939                  57596 16 +     99546 T--------T----G------A--AC---TAC----A-----------A-A-----TA-A---A---
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 I 3
s Tarsius_lariang.k141_609102                               26318 17 +     42269 T--------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--T
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               59634 17 +     65473 T--------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--T
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194007640 18 - 194193292 t-------tt----a------a--at---tat----a-----------a-a-----ta-a---a--c
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  5322  7 +      6782 ------------------------------------------------A-A-----TA-G---A--T
i Tolypeutes_matacus.TolMat_scaffold_269431             I 6 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  135632 13 -    259118 ---------------------A--AT---TAT----A-----------A-A-----TA-A---A---
i Tonatia_saurophila.TonSau_scaffold_3334               I 2 I 3
s Trachypithecus_auratus.k141_738098                        26748 16 +     38948 ---------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Trachypithecus_auratus.k141_738098                    I 4 C 0
s Trachypithecus_crepusculus.k141_1588528                   20480 16 -     32910 ---------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Trachypithecus_crepusculus.k141_1588528               I 4 C 0
s Trachypithecus_cristatus.k141_1011511                      1866 16 -     12939 ---------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Trachypithecus_cristatus.k141_1011511                 I 4 C 0
s Trachypithecus_francoisi.k141_768164                       1802 16 -     14244 ---------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Trachypithecus_francoisi.k141_768164                  I 4 C 0
s Trachypithecus_geei.k141_670367                           43196 21 -     54611 TTTTT----T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        1005 16 -     11566 ---------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Trachypithecus_germaini.k141_868450                   I 3 C 0
s Trachypithecus_hatinhensis.k141_504423                     3176 21 -     15592 TTTTT----T----T------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          1837 15 +     14371 --------------G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Trachypithecus_laotum.k141_760702                     I 4 C 0
s Trachypithecus_leucocephalus.k141_381681                    119 15 +     12481 --------------G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Trachypithecus_leucocephalus.k141_381681              I 5 C 0
s Trachypithecus_melamera.k141_699241                           0 14 -     24393 ---------------------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Trachypithecus_melamera.k141_699241                   N 0 C 0
s Trachypithecus_obscurus.k141_1115109                       5239 16 -     28054 ---------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Trachypithecus_obscurus.k141_1115109                  I 4 C 0
s Trachypithecus_phayrei.ctg3                            44660039 16 -  44834318 ---------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Trachypithecus_phayrei.ctg3                           I 4 C 0
s Trachypithecus_pileatus.k141_1022309                       2339 23 +     13828 TTTTTTT--T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   4938 16 +     90398 T--------G----G------A--AT---TAT----A-----------A-A-----TA-A---A---
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 I 3
s Trichechus_manatus.JH594618.1                          16084662 17 +  31416278 t--------a----a------a--at---tat----a-----------a-a-----ta-a---a--c
i Trichechus_manatus.JH594618.1                         C 0 I 2
s Tupaia_chinensis.KB320831.1                             2792687 17 -   3938065 t--------t----g------a--at---tat----a-----------a-a-----ta-a---a--C
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    4898 17 +     13056 T--------T----G------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69313193 16 -  96451834 t--------g----a------a--at---tat----a-----------a-a-----ta-a---a---
i Tursiops_truncatus.MRVK01000923.1                     C 0 I 3
s Uropsilus_gracilis.UroGra_scaffold_69449                   1097 16 +     10241 T--------T----G------A--AT---TAT----A-----------A-A-----TA-A---A---
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 I 3
s Ursus_maritimus.KK498671.1                              6514580 14 +  28682327 t--------t----g------a--at---tat----a-----------a-a-----ta---------
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  5110 17 -     20643 T--------T----G------A--GT---TAT----A-----------A-A-----TA-A---A--C
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             24651 17 -     33872 T--------T----G------A--GT---TAT----A-----------A-A-----TA-A---A--C
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1524444 16 -   2331223 t--------g----a------a--at---tat----a-----------a-a-----ta-a---a---
i Vicugna_pacos.KN269600.1                              C 0 I 3
s Vulpes_lagopus.VulLag_flattened_line_2045                138091 14 -    281493 T--------T----G------A--AT---TAT----A-----------A-A-----TA---------
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       126666 18 -    134049 T--------G----A------A--AT---TAT----A-----------A-A-----TAAA---A--C
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        214057 14 -    227762 T--------T----G------A--AT---TAT----A-----------A-A-----TA---------
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     14774 17 -     20485 T--------G----A------A--AT---TAT----A-----------A-A-----TA-A---A--C
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           6693 16 -      8775 T--------G----A------A--AT---TAT----A-----------A-A-----TA-A---A---
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 I 3
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             38964  0 -     47444 C
e Sorex_araneus.JH798170.1                               17750754 3364 -  27805282 I
e Erinaceus_europaeus.JH835290.1                         11534163  4 +  16010500 I
e Propithecus_coquerelli.NW_012147997.1                    667273 6500 -   2312742 I
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               11657 141 +    209709 TATT---CCA----------C-T---CACCA-----AGATGCTGAGACATC--CT-------ACT-TTCTGG-T-AT-T-TTGA-----AATAAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATAAGCTAAA--AAT---AAAA-------T-GA-A
s Acinonyx_jubatus.LLWD01000356.1                         2033772 140 +   3721120 --TT---CCA----------C-T---CACCA-----AGCTGCTGAGACATT--TT-------ACT-Ttctgg-t-at-t-ttaa-----aatgaa--aac---------aaa---acat--aag-actGTGT----CGA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTAAcatgtgctaaa--aat---aaaa-------t-ga-a
i Acinonyx_jubatus.LLWD01000356.1                       C 0 I 20
s Acomys_cahirinus.AcoCah_scaffold_1625                    112407 141 -    189883 CTTT---GCA----------T-T---CTCCA-----AGCGGCTGAGACATT---T-------CAT-TTCTGG-T-AT-T-TTGA-----AGTAAA--AAC---------AAA---ACAT--ATG-AATGTGA----ATATGAAG-----TAAGTACA--AA-TCAA-AA---GGGTGCAGAC-TT-C-TG-CAAGTAACATGAGCTAAA--AAT---AAAA-------T-GA-A
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10657106 140 +  23371972 --tt---cCA----------C-T---CACCA-----AGCTGCCGAGACATT--TT-------ACT-Ttctgg-t-at-t-ttaa-----aatgaa--aac---------aaa---acac--aag-aatgTGT----CAA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCatgagctaaa--aat---aaaa-------t-ga-a
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 I 20
s Ailurus_fulgens.LNAC01000003.1                          7094450 140 -  16596857 --tt---cCA----------C-T---CACCA-----AGCTGCTGAGACATT--TT-------ACT-Ttctgg-t-at-t-ttaa-----aatgaa--aac---------aaa---acac--aag-aatgTGT----CAA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-GT-T-TG-CAAGTATcatgagctaaa--aat---aaaa-------t-ga-a
i Ailurus_fulgens.LNAC01000003.1                        C 0 I 20
s Allactaga_bullata.AllBul_scaffold_70162                   16688 140 -     22067 TATT---CCA----------C-T---CACCA-----ATCTGCTGAGACATT--TT-------GGT-TTCTGG-T-AT-T-TTGA-----AATAAA--AAC---------AAA---AC----AAG-AATGTGA----ATA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAGCTAAA--AAT---AAAA-------T-GA-A
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   1150 141 -     60446 TATT---CCA----------C-T---ATCCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATATGCTAAA--AAT---AAAA-------T-GA-A
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         1869 141 -     29318 TATT---CCA----------C-T---ATCCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATATGCTAAA--AAT---AAAA-------T-GA-A
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                          804 141 +     38766 TATT---CCA----------C-T---ATCCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATATGCTAAA--AAT---AAAA-------T-GA-A
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          1763 141 -     80423 TATT---CCA----------C-T---ATCCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATATGCTAAA--AAT---AAAA-------T-GA-A
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            10069 142 -     18050 TATT---CTA----------C-T---CACCA-----AACTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAACTAAA--AAT---AAAA-------T-GA-A
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                 11161 143 -     11521 TATT---CTA----------C-T---CACCA-----AACTGCTGAGACATT--TT-------ACT-TTCTGGGT-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAACTAAA--AAT---AAAA-------T-GA-A
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                             10742 142 -     21359 TATT---CTA----------C-T---CACCA-----AACTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAACTAAA--AAT---AAAA-------T-GA-A
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                 358 142 +      2129 TATT---CTA----------C-T---CACCA-----AACTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAACTAAA--AAT---AAAA-------T-GA-A
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                         10042 142 -     10438 TATT---CTA----------C-T---CACCA-----AACTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAACTAAA--AAT---AAAA-------T-GA-A
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_2718643                            6700 142 +      7047 TATT---CTA----------C-T---CACCA-----AACTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAACTAAA--AAT---AAAA-------T-GA-A
i Alouatta_nigerrima.k141_2718643                       C 0 C 0
s Alouatta_palliata.k141_1316127                             9977 142 +     10410 TATT---CTA----------C-T---CACCA-----AACTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGGC-TT-T-TG-CAAGTATCATGAACTAAA--AAT---AAAA-------T-GA-A
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            3784 142 -      4927 TATT---CTA----------C-T---CACCA-----AACTGATGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAACTAAA--AAT---AAAA-------T-GA-A
i Alouatta_puruensis.k141_1284840                       I 1 C 0
s Alouatta_seniculus.k141_1531728                               0  65 -      1692 ------------------------------------------------------------------------------------------------------------------------------------------------TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAACTAAA--AAT---AAAA-------T-GA-A
i Alouatta_seniculus.k141_1531728                       N 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3519903 140 +   4113121 --tt---cCA----------C-A---CTTCA-----AGCTTCAGAGACATT--TT-------ACT-TTctgg-t-at-t-ttaa-----aatgaa--aac---------aaa---atac--aag-aatgtgt----caa-----tgaagcaagtgaa--aa-tcaa-aa---GGGTACAGAC-TT-C-TG-CAAGTTTCAGGagctaaa--aat---aaag-------t-ga-a
i Ammotragus_lervia.NIVO01013474.1                      I 3 I 20
s Anoura_caudifer.AnoCau_scaffold_422                      390106 141 -    631301 --TT---CTA----------T-T---CCCCA-----AGCTGCTGAGACATT--TT-------ACT-TTTTGG-T-AT-T-TTAA-----CATGAA--AAC---------AAA---ACAT--GAG-AACTTGC----CGA-----TGAAGCAAGTGAA--AA-TCAAAAA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAGCTAAA--AAT---AAAA-------T-GA-A
i Anoura_caudifer.AnoCau_scaffold_422                   I 3 I 20
s Antilocapra_americana.AntAmePen_scaffold_42841            30488 140 +     33004 --CT---CCA----------C-T---CATCA-----AGCTGCAGAGACATT--TT-------ACT-TTCTGA-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGT----CAA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTTTCAGGAGCTAAA--AAT---AAAA-------T-GA-A
i Antilocapra_americana.AntAmePen_scaffold_42841        I 3 I 20
s Aotus_azarae.k141_3170768                                 62425 142 +     78111 TATT---CTA----------C-T---CACAA-----AACTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCACGAGCTAAA--AAT---AAAA-------T-GA-A
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            5367 142 +     22701 TATT---CTA----------C-T---CACCA-----AACTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCACGAGCTAAA--AAT---AAAA-------T-GA-A
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5749324 142 +   9889416 tatt---cta----------c-t---CACCA-----AACTGCTGAGACATT--TT-------ACT-TTCtgg-t-at-t-ttga-----aatgaa--aac---------aaa---acac--aag-aatGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCAcgagctaaa--aat---aaaa-------t-ga-a
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             5912 142 -    104377 TATT---CTA----------C-T---CACCA-----AACTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCACGAGCTAAA--AAT---AAAA-------T-GA-A
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               5914 142 +     23246 TATT---CTA----------C-T---CACCA-----AACTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCACGAGCTAAA--AAT---AAAA-------T-GA-A
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     3495 147 +      5067 T--T---TCA----------CTT---AACCAAGATTAGCTACTGAAAGATT--TT-------ACT-TTCTGG-T-AT-T-TTAA-----AATAAA--AAC---------AAA---ACAC--AGG-AATGTGA----TTA-----TGAAGCAAGTGAAA-AA-TCAA-AA---GGGTACAGAC-TT-C-TG-CAAGTATCATAAGCTAAA--AAT---AAAA-------T-GT-A
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_587554                         840 142 +      9265 TATT---CCA----------C-T---TACTA-----AGCTGCTGAGACATT--TT-------AAT-TTCTGG-T-AT-T-TTAA-----AATGTA--AAT---------AAA---ACAC--AAG-AATGTGA----TGA-----AGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAACTAAA--AAT---AACA-------T-GA-A
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 8515 140 -     29036 --TT---CTA----------T-T---CACTA-----AGCTGCTGAGACATT--TT-------AGT-TTCTGG-T-AT-T-TTAA-----CATGAA--AAC---------AAA---ACAT--GAG-AACTTGC----CGA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAGCTAAA--AAT---AAAA-------T-GA-A
i Artibeus_jamaicensis.ArtJam_scaffold_41619            I 3 I 20
s Ateles_geoffroyi_b.tarseq_2582                             9539174 142 +  39197703 TATT---CTA----------C-T---CACCA-----AACTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAGCTAAA--AAT---AAGA-------T-GA-A
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             60445 142 +     85812 TATT---CTA----------C-T---CACCA-----AACTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAGCTAAA--AAT---AAAA-------T-GA-A
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                11458 142 +     89302 TATT---CTA----------C-T---CACCA-----AACTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAGCTAAA--AAT---AAAA-------T-GA-A
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             15961 142 -     58268 TATT---CTA----------C-T---CACCA-----AACTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAGCTAAA--AAT---AAGA-------T-GA-A
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             63953 142 +    119057 TATT---CTA----------C-T---CACCA-----AACTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ATAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAGCTAAA--AAT---AAAA-------T-GA-A
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               5924 142 -     25888 TATT---CTA----------C-T---CACCA-----AACTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAGCTAAA--AAT---AAAA-------T-GA-A
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 6571 142 -     16375 TATT---TCA----------C-T---TACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----TGA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAACTAAA--AAT---AAAA-------T-GA-A
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                                190 142 +      6337 TATT---TCA----------C-T---TACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----TGA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAACTAAA--AAT---AAAA-------T-GA-A
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26379987 140 +  51448160 --TT---CCA----------C-T---CACCA-----AGCTGCTGAGACATT--TT-------ACA-Ttctgg-t-at-t-ttaa-----aatgaa--aac---------aaa---acac--aag-aacATGT----CAA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTTTCAcgagctaaa--aat---aaaa-------t-ga-a
i Balaenoptera_acutorostrata.KI537095.1                 I 3 I 20
s Balaenoptera_bonaerensis.DF502048.1                        5156 140 -     13118 --TT---CCA----------C-T---CACCA-----AGCTGCTGAGACATT--TT-------ACA-Ttctgg-t-at-t-ttaa-----aatgaa--aac---------aaa---acac--aag-aacaTGT----CAA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTTTCatgagctaaa--aat---aaaa-------t-ga-a
i Balaenoptera_bonaerensis.DF502048.1                   I 3 I 20
s Beatragus_hunteri.BeaHun_scaffold_21644                   42971 140 -     72089 --TT---CCA----------C-T---CATCA-----AGCTTCAGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ATAC--AAG-AATGTGT----CAA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTTTCAGGAGCTAAA--AAT---AAAG-------T-GA-A
i Beatragus_hunteri.BeaHun_scaffold_21644               I 3 I 20
s Bison_bison.KN264915.1                                  6559640 140 +   6870073 --TT---CCA----------C-T---CATCA-----AGCTGCAGAGACATT--TT-------ACT-TTctgg-t-at-t-ttaa-----aatgaa--aac---------aaa---atac--aag-aatgtgt----caa-----tgaagcaagtgaa--aa-tcaa-aa---GGGTACAGAC-TT-T-TG-CAAGTTTCAggagctaaa--aat---aaaa-------t-ga-a
i Bison_bison.KN264915.1                                I 5 I 20
s Bos_indicus.CM003021.1                                138139748 140 - 161108492 --tt---cCA----------C-N---CATCA-----AGCTGCAGAGACATT--TT-------ACT-TTctgg-t-at-t-ttaa-----aatgaa--aac---------aaa---aNAC--AAG-AATGTGT----CAA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTTTCAggagctaaa--aat---aaaa-------t-ga-a
i Bos_indicus.CM003021.1                                I 3 I 20
s Bos_mutus.JH883513.1                                     572286 140 -    998990 --tt---ccA----------C-T---CATCA-----AGCTGCAGAGACATT--TT-------ACT-TTctgg-t-at-t-ttaa-----aatgaa--aac---------aaa---atac--aag-aatgtgt----caa-----tgaagcaagtgaa--aa-tcaa-aa---GGGTACAGAC-TT-T-TG-CAAGTTTCAggagctaaa--aat---aaaa-------t-ga-a
i Bos_mutus.JH883513.1                                  I 3 I 20
s Bos_taurus.CM000177.6                                 136295481 140 - 158972876 --tt---cCA----------C-C---CATCA-----AGCTGCAGAGACATT--TT-------ACT-TTctgg-t-at-t-ttaa-----aatgaa--aac---------aaa---acac--aag-aatGTGT----CAA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTTTCAggagctaaa--aat---aaaa-------t-ga-a
i Bos_taurus.CM000177.6                                 I 3 I 20
s Bubalus_bubalis.KI419065.1                              1232564 140 -   1914593 --TT---CCA----------C-T---CATCA-----AGCTGCAGAGACATT--TT-------ACT-TTctgg-t-at-t-ttaa-----aatgaa--aac---------aaa---atac--aag-aatgtgt----caa-----tgaagcaagtgaa--aa-tcaa-aa---GGGTACAGAC-TT-T-TG-CAAGTTTCAGGAGCTAAA--AAT---AAAA-------C-GA-A
i Bubalus_bubalis.KI419065.1                            I 3 I 20
s Cacajao_ayresi.k141_724503                               113807 142 -    171031 TATT---CTA----------C-T---CACCA-----AACTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAGCTAAA--AAT---AAAA-------T-GA-A
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 12839 142 +    125063 TATT---CTA----------C-T---CACCA-----AACTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAGCTAAA--AAT---AAAA-------T-GA-A
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                14880 142 -    216513 TATT---CTA----------C-T---CACCA-----AACTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAGCTAAA--AAT---AAAA-------T-GA-A
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        7423 142 -    134917 TATT---CTA----------C-T---CACCA-----AACTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAGCTAAA--AAT---AAAA-------T-GA-A
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3219358 141 -   8989139 --tt---cTA----------C-C---CACCA-----AGCTGCTGAGACATT--TT-------ACt-ttctgg-t-at-t-ttaa-----aatgaa--aac---------aaa---acac--aag-aacGTGT----CGA-----TGAAGCAAGTGAAA-AA-TCAG-AA---GGGTACAGAC-TT-T-TG-CAAGTTTCatgagctaaa--aat---aaaa-------t-ga-a
i Camelus_bactrianus.KN276303.1                         I 3 I 40
s Camelus_dromedarius.KN271192.1                           397060 141 -  15254737 --tt---ctA----------C-C---CACCA-----AGCTGCTGAGACATT--TT-------ACt-ttctgg-t-at-t-ttaa-----aatgaa--aac---------aaa---acac--aag-aacGTGT----CGA-----TGAAGCAAGTGAAA-AA-TCAG-AA---GGGTACAGAC-TT-T-TG-CAAGTTTCatgagctaaa--aat---aaaa-------t-ga-a
i Camelus_dromedarius.KN271192.1                        I 3 I 40
s Camelus_ferus.KB016973.1                                2972795 141 +   6889770 --tt---cTA----------C-C---CACCA-----AGCTGCTGAGACATT--TT-------ACt-ttctgg-t-at-t-ttaa-----aatgaa--aac---------aaa---acac--aag-aacgTGT----CGA-----TGAAGCAAGTGAAA-AA-TCAG-AA---GGGTACAGAC-TT-T-TG-CAAGTTTCatgagctaaa--aat---aaaa-------t-ga-a
i Camelus_ferus.KB016973.1                              I 3 I 40
s CanFam4.chr31                                          11519267 135 +  39901454 --CT---CCA----------C-T---CACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGT----CAA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAGCTAAA--AAT---AAA--------------
i CanFam4.chr31                                         C 0 I 23
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   14292 135 +     87036 --CT---CCA----------C-T---CACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGT----CAA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAGCTAAA--AAT---AAA--------------
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 I 23
s Canis_lupus_dingo.QKWQ01001993.1                       11265934 135 -  35597290 --CT---CCA----------C-T---CACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCtgg-t-at-t-ttga-----aatgaa--aac---------aaa---acac--aag-aatgTGT----CAA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCAtgagctaaa--aat---aaa--------------
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 I 23
s Canis_lupus_familiaris.chr31                           11088468 135 +  39895921 --CT---CCA----------C-T---CACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCtgg-t-at-t-ttga-----aatgaa--aac---------aaa---acac--aag-aatgTGT----CAA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCAtgagctaaa--aat---aaa--------------
i Canis_lupus_familiaris.chr31                          C 0 I 23
s Canis_lupus_orion.HG994411.1                           16455483 135 -  44759192 --CT---CCA----------C-T---CACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCtgg-t-at-t-ttga-----aatgaa--aac---------aaa---acac--aag-aatgTGT----CAA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCAtgagctaaa--aat---aaa--------------
i Canis_lupus_orion.HG994411.1                          C 0 I 23
s Capra_aegagrus.CM003214.1                              21324979 140 + 157394656 --TT---CCA----------C-A---CTTCA-----AGCTTCAGAGACATT--TT-------ACT-TTctgg-t-at-t-ttaa-----aatgaa--aac---------aaa---atac--aag-aatgtgt----caa-----tgaagcaagtgaa--aa-tcaa-aa---GGGTACAGAC-TT-C-TG-CAAGTTTCAGGagctaaa--aat---aaag-------t-ga-a
i Capra_aegagrus.CM003214.1                             I 3 I 20
s Capra_hircus.CM004562.1                               135706206 140 - 157403528 --TT---CCA----------C-A---CTTCA-----AGCTTCAGAGACATT--TT-------ACT-TTctgg-t-at-t-ttaa-----aatgaa--aac---------aaa---atac--aag-aatgtgt----caa-----tgaagcaagtgaa--aa-tcaa-aa---GGGTACAGAC-TT-C-TG-CAAGTTTCAGGagctaaa--aat---aaag-------t-ga-a
i Capra_hircus.CM004562.1                               I 3 I 20
s Carlito_syrichta.NW_007248099.1                          308852 136 +    345090 ta------ca----------c-t---CACCA-----AGCTGCtgagaaatt--tt-------act-ttttgg-t-at-t-ttaa-----aatgaa--aac---------aaa---acac--aag-aatgTGA----CAA-----TTAAGCAAGTGAA--AA-TCAA-AA---GGGCACAGAC-TT-CTTG-CAAGTAAcatgaactaaa--aat---aaaa-------------
i Carlito_syrichta.NW_007248099.1                       C 0 I 4
s Carollia_perspicillata.CarPer_scaffold_4436               59308 140 +     67245 --TT---CTA----------T-T---CACCA-----AGCTGCTGAGACATT--TT-------AGT-TTCTGG-T-AT-T-TTAA-----CATGAA--AAC---------AAA---ACAT--GAG-AACTTGC----CGA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAGCTAAA--AAT---AAAA-------T-GA-A
i Carollia_perspicillata.CarPer_scaffold_4436           I 3 I 20
s Castor_canadensis.CasCan_scaffold_47037                   30517 142 +     33760 TATT---CTG----------C-T---CGCCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATAAA--AAC---------AAA---ACAC--AAG-AATGTGA----CTA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CGAGTATCTTGATCTAAA--AAT---AAAA-------T-GA-A
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   158667 142 -    276539 --TT---TCA----------C-T---CACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-C-AT-T-TTAC-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGT----CGA-----TGAAGCAAGTGAAAAAA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTTTCATGAGCTAAA--AAT---AAAA-------T-GA-A
i Catagonus_wagneri.CatWag_scaffold_1305                I 3 I 20
s Cavia_aperea.AVPZ01000278.1                            15786380 106 -  24422027 taTT---CTG----------T-T---CACCA-----AGCTGCTGAGAT-----AT-------GCA-TTctgg-t-at-t-ttaa-----aatgaa--aac---------aaa---acac--aag-aatgtGA----CTA-----TGAACCAtgtgaa--aa-tcaa-aa---gagaacagNN-N--------------------------------------------------
i Cavia_aperea.AVPZ01000278.1                           C 0 I 168
s Cavia_porcellus.DS562889.1                             15798316 106 -  24440124 taTT---CTG----------T-T---CACCA-----AGCTACTGAGAT-----AT-------GCA-TTctgg-t-at-t-ttaa-----aatgaa--aac---------aaa---acat--aag-aatgTGA----CTG-----TGAACCACgtgaa--aa-tcaa-aa---gagaacagAC-T--------------------------------------------------
i Cavia_porcellus.DS562889.1                            C 0 I 41
s Cavia_tschudii.CavTsc_scaffold_488                       176507 106 +    436027 TATT---CTG----------T-T---CACCA-----AGCTACTGAGAT-----AT-------GCA-TTCTGG-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ACAT--AAG-AATGTGA----CTG-----TGAACCACGTGAA--AA-TCAA-AA---GAGAACAGAC-T--------------------------------------------------
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 I 41
s Cebus_albifrons.Contig22                               18890656 142 -  29618158 TATT---CTA----------C-T---CACCA-----AACTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAG--AA-TTAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAGCTAAA--AAT---AAAA-------T-GA-A
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 8200 142 -     26817 TATT---CTA----------C-T---CACCA-----AACTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAG--AA-TTAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAGCTAAA--AAT---AAAA-------T-GA-A
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                12440 142 +     25043 TATT---CTA----------C-T---CACCA-----AACTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAG--AA-TTAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAGCTAAA--AAT---AAAA-------T-GA-A
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         7887 136 +     21754 TA------CA----------C-T---CCCCA-----AGCTGCTGAGAAATT--TT-------ACT-TTTTGG-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CAA-----TTAAGCAAGTGAA--AA-TCAA-AA---GGGCACAGAC-TT-CTTG-CAAGTAATATGAGCTAAA--AAT---AAAA-------------
i Cephalopachus_bancanus.k141_702587                    C 0 I 4
s Ceratotherium_simum.JH767818.1                          4363665 140 +   7569818 --TT---CCT----------C-T---CATGA-----AGCTGCTGAGACGTT--TT-------CCT-TTCTGG-T-AT-T-Ttaa-----catgaa--aac---------aaa---atac--agG-AATTTGT----CGA-----AGAAGCAAGCGAA--AA-TCAA-AA---GGGTACACAC-TT-T-TG-CAAGTATCatgagctaaa--aat---aaaa-------t-ga-a
i Ceratotherium_simum.JH767818.1                        I 3 I 20
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         3422 140 -      9338 --TT---CCT----------C-T---CATGA-----AGCTGCTGAGACGTT--TT-------CCT-TTCTGG-T-AT-T-TTAA-----CATGAA--AAC---------AAA---ATAC--AGG-AATTTGT----CGA-----AGAAGCAAGCGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAGCTAAA--AAT---AAAA-------T-GA-A
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    I 3 I 20
s Cercocebus_atys.KQ010443.1                              6555095 141 +   6739814 TATT---CCA----------C-T---ATCCA-----AGCTGCTGAGACATT--TT-------ACT-TTCtgg-t-at-t-ttga-----aatgaa--aac---------aaa---acac--aag-aatgTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATcataagctaaa--aat---aaaa-------t-ga-a
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      26572 141 +     60454 TATT---CCA----------C-T---ATCCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATAAGCTAAA--AAT---AAAA-------T-GA-A
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          1778 141 -     21101 TATT---CCA----------C-T---ATCCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATAAGCTAAA--AAT---AAAA-------T-GA-A
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         59087 141 -    107033 TATT---CCA----------C-T---ATCCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---CCAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATAAGCTAAA--AAT---AAAA-------T-GA-A
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        1977 141 -     17608 TATT---CCG----------C-T---ATCCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATATGCTAAA--AAT---AAAA-------T-GA-A
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          29473 141 +     30494 TATT---CCG----------C-T---ATCCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATATGCTAAA--AAT---AAAA-------T-GA-A
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          58318 141 -     59240 TATT---CCG----------C-T---ATCCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATATGCTAAA--AAT---AAAA-------T-GA-A
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          2019 141 +     16677 TATT---CCG----------C-T---ATCCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATATGCTAAA--AAT---AAAA-------T-GA-A
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           24178 141 +     35983 TATT---CCG----------C-T---ATCCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATATGCTAAA--AAT---AAAA-------T-GA-A
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11990705 141 +  12117833 TATT---CCG----------C-T---ATCCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATATGCTAAA--AAT---AAAA-------T-GA-A
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46477464 141 +  46592721 TATT---CCG----------C-T---ATCCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATATGCTAAA--AAT---GAAA-------T-GA-A
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      41015 141 -     45581 TATT---CTG----------C-T---ATCCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATATGCTAAA--AAT---AAAA-------T-GA-A
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       2020 141 +     35577 TATT---CCG----------C-T---ATCCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATATGCTAAA--AAT---AAAA-------T-GA-A
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        1796 141 -     25661 TATT---CCG----------C-T---ATCCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATATGCTAAA--AAT---AAAA-------T-GA-A
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        1775 141 -     17744 TATT---CCG----------C-T---ATCCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATATGCTAAA--AAT---AAAA-------T-GA-A
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        21391 141 +     37128 TATT---CCG----------C-T---ATCCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATATGCTAAA--AAT---AAAA-------T-GA-A
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           2628  77 -      6963 -------------------------------------------------------------------------------------------------------------------ACAC--AAA-AATGTGA----TGA-----TGAAGTAAGTGAA--AA-TCAA-AA---GGGTACAGTC-AT-T-TT-CAAGCATCATGAGCTAAA--AAT---AAA--------------
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      I 52 I 25
s Cheirogaleus_major.k141_1157592                           58855 142 -     68416 TATT---TCA----------C-T---TACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----TGA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAACTAAA--AAT---AAAA-------T-GA-A
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            7899 142 +     13308 TATT---TCA----------C-T---TACTA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----TGA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAACTAAA--AAT---AAAA-------T-GA-G
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             5467 142 -     18223 TACT---CTA----------C-T---CACCA-----AACTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAGCTAAA--AAT---AAAA-------T-GA-A
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             22488 142 +     25473 TACT---CTA----------C-T---CACCA-----AACTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAGCTAAA--AAT---AAAA-------T-GA-A
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           41525 142 +     57117 TACT---CTA----------C-T---CACCA-----AACTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAGCTAAA--AAT---AAAA-------T-GA-A
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          46204 142 +     54541 TACT---CTA----------C-T---CACCA-----AACTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAGCTAAA--AAT---AAAA-------T-GA-A
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15961549  51 +  43084221 TATT---CTG----------C-T---CACT------AGCTGCTGAGATATT--AT-------Aca-ttctga-t-tttt-ctta-----aat----------------------------------------------------------------------------------------------------------------------------------------------
i Chinchilla_lanigera.JH721867.1                        C 0 I 73
s Chiropotes_israelita.k141_1189915                         71011 142 +    196370 TATT---CTA----------C-T---CACCA-----AACTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAGCTAAA--AAT---AAAA-------T-GA-A
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          15191 142 +     40510 TATT---CTA----------C-T---CACCA-----AACTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAGCTAAA--AAT---AAAA-------T-GA-A
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15138943  85 -  15256731 TATT---CCA----------C-T---ATCCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TTATTCAA----------------------------------------------------------------------------------
i Chlorocebus_aethiops.ctg22                            C 0 I 23
s Chlorocebus_pygerythrus.k141_1486215                      33991 141 -     53260 TATT---CCA----------C-T---ATCCA-----AGCTGCTGAGACATT--TT-------ACT-TCCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATATGCTAAA--AAT---AAAA-------T-GA-A
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101144551 141 + 101219884 TATT---CCA----------C-T---ATCCA-----AGCTGCTGAGACATT--TT-------ACT-TTCtgg-t-at-t-ttga-----aatgaa--aac---------aaa---acac--aag-aatgTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATcatatgctaaa--aat---aaaa-------t-ga-a
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                16274 134 -     21363 T-TC----CA----------C-T---CACTA-----AGTT-CTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTAA-----AATAAA--AAC---------AAA---ACAC--AAG-AACGTGA----TGA-----TGAGGTAAGTGAA--AA-TCAA-AA---GGGTATAGAC-AT-T-TT-CAAGTCTCATGAGCTAAA--AAT---AAA--------------
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 I 25
s Choloepus_hoffmanni.KN194586.1                           761582 134 +    964067 t-tc----ca----------C-T---CACTA-----AGTT-CTGAGacatt--tt-------act-ttctgg-t-at-t-ttaa-----aataaa--aac---------aaa---acac--aag-aacGTGA----TGA-----TGAGGTAAGTGAA--AA-TCAA-AA---GGGTATAGAC-AT-T-TT-CAAGTCTCAtgagctaaa--aat---aaa--------------
i Choloepus_hoffmanni.KN194586.1                        C 0 I 25
s Chrysochloris_asiatica.ChrAsi_scaffold_3549804              198  94 -       354 T-AC----CA----------C-T---TACTA-----AGTTGCTGAGACATT--TT-------ACT-TTCTGT-T-AT-T-TTAA-----AATATACAAAC---------AAA---ATAT--AAG-AATGTGA----TGA-----TAAA----CTGAA-GAA-TCAA-A------------------------------------------------------------------
i Chrysochloris_asiatica.ChrAsi_scaffold_3549804        I 2 N 0
s Colobus_angolensis.KN985967.1                          10886320 141 +  10971483 TATT---CCA----------C-T---AACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCtgg-t-at-t-ttga-----aatgaa--aac---------aaa---acac--aag-aatgTGA----CAA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATcataagctaaa--aat---aaaa-------t-ga-a
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147664486 141 + 156195979 TATT---CCA----------C-T---AACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CAA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATAAGCTAAA--AAT---AAAA-------T-GA-A
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            16471 141 +     23629 TATT---CCA----------C-T---AACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CAA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATAAGCTAAA--AAT---AAAA-------T-GA-A
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60613394 140 +  78930452 --TT---CCA----------C-T---TACCA-----AGCTGCTGAGACATT--TT-------ACT-TTAtgg-t-at-t-ttaa-----aaggaa--aac---------aaa---acac--aag-aaagtGT----TGA-----TGAAGCTAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-T-ACAAGTACcatgatctaaa--a--ata-aaa-------t-gt-a
i Condylura_cristata.JH655880.1                         I 3 I 27
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         39489 140 -     40477 --CT---CCA----------T-T---CCTCA-----AGTTGCTGAGACATT--TT-------ACT-TTGTGG-T-AT-T-TAAA-----AATGAA--AAC---------AAA---ACAC--ATG-AATATGC----CGA-----TGAAGCAACTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TT-CAAGTTTCCTGATCTAAA--AAT---AAAA-------A-GA-A
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     I 3 I 85
s Cricetomys_gambianus.CriGam_scaffold_949                 278350 146 -    399297 TATT---CCT----------C-T---CTCCA-----AGCTGCTGAGACATT---T-------AGT-TTCTGG-T-AT-T-TTGAAGAAAAAAAAA--AAC---------AAA---ACAT--ACG-AATGTGA----ATATGAAG-----TAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGATCTAAA--AAT---AAAA-------T-GA-A
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53029033 141 +  72327488 TATT---CCA----------C-T---CTCCA-----AACAACTGAGACATT---T-------AGT-TTCtgg-t-at-t-ttga-----aataaa--aac---------aaa---acat--atg-aatGTGA----ATATGAAG-----TAAGTGCA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCAtgagctaaa--aat---aaaa-------t-ga-a
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_88140              1953 138 +     11655 --TT---CCA----------C-T---CACCA-----AATATCTGAGACATT--TT-------ACT-TTCTG--C-TA-T-TTAA-----AATGAA--AAC---------GAA---ATAC--ACA-AATGTGT----TGA-----TGACAAAAATGAA--AA-TCAA-AA---GGGTATAGAC-TT-C-T-GTGAGTATCATGAGCCAAATTT------AAA-------T-GA-A
i Crocidura_indochinensis.CroInd_scaffold_88140         I 3 I 20
s Cryptoprocta_ferox.CryFer_flattened_line_19014            51806 140 -     70449 --TT---CCA----------C-T---CACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ACAT--AAG-ACTGTGT----CGA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGTGCTAAA--ATT---AAAA-------T-GA-A
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 I 20
s Ctenodactylus_gundi.CteGun_scaffold_447                  207945 144 -    956709 GATT---CTG----------C-T---CATCA-----AGCTGTTGAGACATTTTTT-------ACT-TTCTGG-T-AT-T-TTAA-----AATAAA--AAC---------AAA---ACAT--AAG-AATGTGA----CTG-----TGAAGCAAGTGAA--AA-TCCA-AA---GGGCACAGAC-TT-C-AG-CAATTATAATGAACTAAA--AAT---AAAG-------T-TT-A
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 30524 113 -     67205 TGTT---CTG----------C-T---CACCA-----AGCTGCTGAAATATT--AT-------ACA-TTCTGG-T-AT-C-TTAA-----AATAAA--AAC---------ACAAAAACAC--ATG-AATGTGA----CTA-----TAAACCAAGTGGAA-AA-TCAA-AA---GGGCACAGAC-T--------------------------------------------------
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 I 46
s Cuniculus_paca.CunPac_flattened_line_16637                17566 107 +     26546 T--T---CTG----------C-T---CACCA-----AGCTGCTGAGATATT--AT-------GCA-TTCTGG-T-AT-T-TTAA-----AATAAA--AAC---------AAA---ACAC--AAG-AATGTGA----CTA-----TGAGCCACGTAAA--AA-TCAA-AA---GGGTACAGAC-T--------------------------------------------------
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 I 31
s Dasyprocta_punctata.DasPun_flattened_line_634             58655 109 -    236241 CATT---ATG----------T-G---CACCA-----AGCTGCTGAGATATT--AT-------GCA-TTCTGG-T-AT-T-TTAA-----AATAAA--AGC---------AAA---ACAC--AAG-AAGGTGA----CTA-----TGAACCACGTGAA--AA-TCAA-AA---GGGTACAGAT-T--------------------------------------------------
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 I 30
s Dasypus_novemcinctus.JH568778.1                          183463 133 -   6883506 T-TC----CA----------C-T---TACCA-----AGTTGCTGAGAC-TT--TT-------ACT-Ttctgg-t-at-t-ttaa-----aataaa--aac---------aaa---acac--aag-agtGTGA----TGA-----TAAAGTAAGTGA---AA-TCAA-AA---GGGTACAGTC-AT-T-TT-CAAGCATCATgagctaaa--aat---aaa--------------
i Dasypus_novemcinctus.JH568778.1                       C 0 I 25
s Daubentonia_madagascariensis.ctg11                     16844710 142 +  31942871 TATT---CCA----------C-T---TACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TAAA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----TGA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAACTAAA--AAT---AAAA-------T-GA-A
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80036610 140 -  96802777 --tT---CCA----------C-T---CACCA-----AGCTGCTGAGACATT--TT-------ACA-TTctgg-t-at-t-ttaa-----aatgaa--aac---------aaa---acac--aag-aacGTGT----CAA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTTTCAtgagctaaa--aat---aaaa-------t-ga-a
i Delphinapterus_leucas.KZ290064.1                      I 3 I 20
s Desmodus_rotundus.KZ672188.1                           18698583 140 -  18957592 --tT---CTA----------T-T---CACCA-----AGCTGCTGAGACATT--TT-------ACT-Ttctgg-t-at-t-ttaa-----aatgaa--aac---------aaa---acat--gag-aACTTGC----CGA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCatgagctaaa--aat---aaaa-------t-ga-a
i Desmodus_rotundus.KZ672188.1                          I 3 I 20
s Dicerorhinus_sumatrensis.PEKH010003161.1                 322314 140 +    993696 --TT---CCT----------C-T---CACCA-----AGCTGCTGAGACATT--TT-------CCT-TTCtgg-t-at-t-ttaa-----aatgaa--aac---------aaa---atac--aag-aatTTGT----CGA-----AGAAGCAAGCGAA--AA-TCAA-AA---GGATACAGAC-TT-T-TG-CAAGTATCAtgagctaaa--aat---aaaa-------t-ga-a
i Dicerorhinus_sumatrensis.PEKH010003161.1              I 3 I 20
s Diceros_bicornis.DicBicMic_scaffold_9545                   2967 140 +    151128 --TT---CCT----------C-T---CACGA-----AACTGCTGAGACGTT--TT-------CCT-CTCTGG-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ATAC--AAG-AATTTGT----CGA-----AGAAGCAAGCGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAGCTAAA--AAT---AAAA-------T-GA-A
i Diceros_bicornis.DicBicMic_scaffold_9545              I 3 I 20
s Dinomys_branickii.DinBra_scaffold_1996                   156802 109 +    228994 TATT---CTG----------C-T---CACC------AGCTGCTGGGATATT--AT-------GCA-TTGTTC-T-TTTT-TTTA-----AATTAA--AAC---------AAA---ACAC--AAG-AATATAA----CTA-----TGAACCATGTGAA--AA-TCAG-AA---AGGTACAGAC-T--------------------------------------------------
i Dinomys_branickii.DinBra_scaffold_1996                C 0 I 32
s Dipodomys_ordii.KN672545.1                              3656121 143 +   4240102 tatt---ctg----------c-t---CACCA-----AGCTGCTGAGACATT--TC-------ACT-TTCtgg-t-at-ttttga-----aataaa--aac---------aaa---acat--aag-aatCTGA----CTA-----CGTATCTAGTGAAA-AA-TCAA-AA---GGGTACAGAC-TTTT-TG-CAAGTATCGTGAGCTAAA--AAT---AA---------C-GA-A
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 27754 143 +     28912 TATT---CTG----------C-T---CACCA-----AGCTGCTGAGACATT--TC-------ACT-TTCTGG-T-AT-ATTTGA-----AATAAA--AAC---------AAA---ACAT--AAG-AATCTGA----CTA-----CGTATCTAGTGAAA-AA-TCAA-AA---GGGTACAGAC-TTTT-TG-CAAGTATCGTGAGCTAAA--AAT---AA---------C-GA-A
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                35905 109 -     73477 TATT---CTG----------C-T---CACCA-----ATCTGCTGAGATATT--AT-------GCA-TTCTGG-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CTA-----TGAACCATGTGAA--AA-TCAA-AA---GAGTACAGAC-T--------------------------------------------------
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 I 31
s Echinops_telfairi.JH980316.1                           22998320  95 -  44670279 T-TC----CA----------C-T---AACCA-----AGATGCTGAAACATT--TT-------ACt-ttctgg-t-at-t--taa-----aatata--aat---------gaa---acct--AGG-AATATGA----TAA-----TGATGTAATTGAAA-AC-TCAA-A------------------------------------------------------------------
i Echinops_telfairi.JH980316.1                          I 2 I 99
s Eidolon_helvum.KE772537.1                                 12017 140 +     24177 --TT---CCA----------C-T---CATCA-----AGCTGCTGAGACATT--TT-------ACT-TCgtgg-t-at-t-ttaa-----aatgaa--aac---------aaa---acac--aag-aatGTGT----CGA-----TGAAGCAAGTGAA--AA-TCAA-AA---GAGTACAGAC-TT-T-TA-TAAGTATcatgagctaaa--aat---aaaa-------a-ta-a
i Eidolon_helvum.KE772537.1                             I 3 I 73
s Elaphurus_davidianus.JRFZ01086400.1                     1491256 140 +   1727528 --TT---CCA----------C-T---CATCA-----AGCTGCAGAGACATT--TT-------ACT-TTctgg-t-at-t-ttaa-----aatgaa--aac---------aaa---atac--aag-aatgtgt----caa-----tgaagcaagtgaa--aa-tcaa-aa---GGGTACAGAC-TT-T-TG-CAAGTTTCAggagctaaa--aat---aaaa-------t-ga-a
i Elaphurus_davidianus.JRFZ01086400.1                   I 3 I 20
s Elephantulus_edwardii.JH947210.1                        7815736 129 +  15467074 ----------------------T---CACCA-----AGTTGCTGAGACATT--TT-------act-tgctgg-t-at-t-ttaa-----attata--aac---------aaa---aCAT--GAG-AAAGTGA----TGA-----TGAAGTAAGTGAAA-AA-CTGT-AA---GGGTACAGAC-GA-T-TT-CAAGTAttataaactaaa--aat---aa---------------
i Elephantulus_edwardii.JH947210.1                      I 7 I 20
s Ellobius_lutescens.LOEQ01003611.1                        239580 141 -    369425 TATT---CCA----------C-T---CTCCA-----TGCGACTGAGACATT---T-------AGT-TTCtgg-t-at-t-ttga-----aataaa--aac---------aaa---acat--atg-aaTGTGA----ATATGAAG-----TAAGTGCA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGCATCgtaagctaaa--aat---aaaa-------g-ga-a
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           6693 136 -      7838 TATT---CCA----------C-T---CTCCA-----CGCGACTGAGACATT---T-------ACT-TTCtgg-t-at-t-ttga-----aa--------a---------aaa---acat--atg-aatGTGA----ATATGAAG-----TAAGTGCA--AA-TCAA-AA---GGGTACAGACGTT-T-TG-CAAGCATCATgagctaaa--aat---aaaa-------g-ga-a
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85871973 140 +  99434291 --TT---CCA----------C-T---CACCA-----AGCTGCTGAGACATT--TT-------ACT-Ttctgg-t-at-t-ttaa-----aatgaa--aac---------aaa---acac--aag-aatgtGT----CAA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCatgagctaaa--aat---aaaa-------t-ga-a
i Enhydra_lutris.KZ291749.1                             C 0 I 20
s Eptesicus_fuscus.JH977687.1                             4703965 135 +   6522550 --tt---cCA----------T-T---CACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-at-t-t-ga-----aataaa--agc---------aaa---acat--aag-AATGTGT----T--------GAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCatgagctaaa--aat---aaaa-------t--a-a
i Eptesicus_fuscus.JH977687.1                           I 3 I 20
s Equus_asinus.JREZ01000062.1                             5852766 140 -   7175178 --TT---CCT----------C-T---CACCA-----AGCTGCTGAGACATT--TT-------ACT-TTctgg-t-at-t-ttaa-----aatgaa--aac---------aaa---acac--aag-aatGTGT----CGA-----TGAAGCAAGCGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TC-CGAGGATCaggagctaaa--aat---aaaa-------t-ga-a
i Equus_asinus.JREZ01000062.1                           I 3 I 20
s Equus_caballus.CM000402.2                              13351269 140 +  41866177 --TT---CCT----------C-T---CACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCtgg-t-at-t-ttaa-----aatgaa--aac---------aaa---acac--aag-aatGTGT----CGA-----TGAAGCAAGCGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TC-CAAGGATCAggagctaaa--aat---aaaa-------t-ga-a
i Equus_caballus.CM000402.2                             I 3 I 20
s Equus_przewalskii.ATBW01073585.1                          12759 140 +     92910 --TT---CCT----------C-T---CACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCtgg-t-at-t-ttaa-----aatgaa--aac---------aaa---acac--aag-aatGTGT----CGA-----TGAAGCAAGCGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TC-CAAGGATCaggagctaaa--aat---aaaa-------t-ga-a
i Equus_przewalskii.ATBW01073585.1                      I 3 I 20
s Erinaceus_europaeus.JH835290.1                         11534167  13 +  16010500 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------atgaaataaa--a------aa--------------
i Erinaceus_europaeus.JH835290.1                        I 4 I 21
s Erythrocebus_patas.Contig8                             48771153  61 -  48907691 ---------------------------------------------------------------------TGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA-----------------------------------------------------------------
i Erythrocebus_patas.Contig8                            I 37 I 43
s Eschrichtius_robustus.EscRob_flattened_line_685          314826 140 +    330699 --TT---CCA----------C-T---CACCA-----AGCTGCTGAGACATT--TT-------ACA-TTCTGG-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ACAC--AAG-AACATGT----CAA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTTTCATGAGCTAAA--AAT---AAAA-------T-GA-A
i Eschrichtius_robustus.EscRob_flattened_line_685       I 3 I 20
s Eubalaena_japonica.EubJap_flattened_line_7756             61278 140 +     89355 --TT---CCA----------C-T---CACCA-----AGCTGCTGAGACATT--TT-------ACA-TTCTGG-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ACAC--AAG-AACATGT----CAA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTTTCATGAGCTAAA--AAT---AAAA-------T-GA-A
i Eubalaena_japonica.EubJap_flattened_line_7756         I 3 I 20
s Eulemur_albifrons.k141_715837                              4912 143 +     13586 TATT---TCA----------C-T---TACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----TGA-----TGAAGCAAGTGAA--AAATCCA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAACTAAA--AAT---AAAA-------T-GA-A
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               4843 143 -      6809 TATT---TCA----------C-T---TACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----TGA-----TGAAGCAAGTGAA--AAATCCA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAACTAAA--AAT---AAAA-------T-GA-A
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            11320 143 +     36558 TATT---TCA----------C-T---TACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----TGA-----TGAAGCAAGTGAA--AAATCCA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAACTAAA--AAT---AAAA-------T-GA-A
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             7641 143 +     60246 TATT---TCA----------C-T---TACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----TGA-----TGAAGCAAGTGAA--AAATCCA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAACTAAA--AAT---AAAA-------T-GA-A
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                11117 143 +    109717 TATT---TCA----------C-T---TACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----TGA-----TGAAGCAAGTGAA--AAATCCA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAACTAAA--AAT---AAAA-------T-GA-A
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               15503 143 +     16540 TATT---TCA----------C-T---TACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----TGA-----TGAAGCAAGTGAA--AAATCCA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAACTAAA--AAT---AAAA-------T-GA-A
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                15778 143 +     27497 TATT---TCA----------C-T---TACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----TGA-----TGAAGCAAGTGAA--AAATCCA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAACTAAA--AAT---AAAA-------T-GA-A
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           18235 143 +     26808 TATT---TCA----------C-T---TACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----TGA-----TGAAGCAAGTGAA--AAATCCA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAACTAAA--AAT---AAAA-------T-GA-A
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                32973 143 +     46535 TATT---TCA----------C-T---TACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----TGA-----TGAAGCAAGTGAA--AAATCCA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAACTAAA--AAT---AAAA-------T-GA-A
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              15697 143 -     29447 TATT---TCA----------C-T---TACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----TGA-----TGAAGCAAGTGAA--AAATCCA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAACTAAA--AAT---AAAA-------T-GA-A
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129892731 140 - 159252932 --TT---CCA----------C-T---CACCA-----AGCTGCTGAGACATT--TT-------ACT-TTctgg-t-at-t-ttaa-----aatgaa--aac---------aaa---acat--aag-actGTGT----CGA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTAACatgtgctaaa--aat---aaaa-------t-ga-a
i Felis_catus.CM001386.2                                C 0 I 20
s Felis_catus_fca126.CM031420.1                         129279818 140 - 158578461 --TT---CCA----------C-T---CACCA-----AGCTGCTGAGACATT--TT-------ACT-TTctgg-t-at-t-ttaa-----aatgaa--aac---------aaa---acat--aag-actGTGT----CGA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTAAcatgtgctaaa--aat---aaaa-------t-ga-a
i Felis_catus_fca126.CM031420.1                         C 0 I 20
s Felis_nigripes.FelNig_flattened_line_8080                 20963 140 +     52776 --TT---CCA----------C-T---CACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ACAT--AAG-ACTGTGT----CGA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGCAACATGTGCTAAA--AAT---AAAA-------T-GA-A
i Felis_nigripes.FelNig_flattened_line_8080             C 0 I 20
s Galago_moholi.ctg555                                     210738 142 -    847004 TATT---CCA----------C-T---TACCA-----AGCTGCTGAGACATT--TT-------AAT-TTCTGG-T-AT-T-TTAA-----AATGTA--AAC---------AAA---ACAC--AAG-AATGTGA----GGA-----AGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-C-TG-CAAGTATCATGAACTAAA--AAT---AAAA-------T-GA-A
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           13112 142 -     43889 TATT---CCA----------C-T---TACCA-----AGCTGCTGAGACATT--TT-------AAT-TTCTGG-T-AT-T-TTAA-----AATGTA--AAC---------AAA---ACAC--AAG-AATGTGA----GGA-----AGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-C-TG-CAAGTATCATGAACTAAA--AAT---AAAA-------T-GA-A
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          10184 142 +     27357 TATT---CCA----------C-T---TACCA-----AGCTGCTGAGACATT--TT-------AAT-TTCTGG-T-AT-T-TTAA-----AATGTA--AAC---------AAA---ACAC--AAG-AATGTGA----GGA-----AGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-C-TG-CAAGTATCATGAACTAAA--AAT---AAAA-------T-GA-A
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               156087 142 +    324696 TATT---CTG----------C-T---CACTG-----AACTGCTGCAACATT--TT-------ACT-TTCTGG-T-AT-T-TTAA-----ATTGAA--AAC---------TAA---ACAT--AAG-AATGTGA----CGA-----GGAAGAAACTGAA--AA-TGAA-AA---GGGTACAGAC-TT-T-TG-CAAGTTTTAGGAGCTAAA--AAT---AAAA-------T-GA-A
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    181056 140 -    189561 --tt---cCA----------C-T---CATCA-----AGCTGCAGAGACATT--TT-------ACT-Ttctgg-t-at-t-ttaa-----aatgaa--aac---------aaa---atac--aag-aatgtgt----caa-----tgaagcaagtgaa--aa-tcaa-aa---GGGTACAGAC-TT-T-TG-CAAGTTTCAggagctaaa--aat---aaaa-------t-ga-a
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 3 I 20
s Glis_glis.GliGli_scaffold_79770                           12881 145 -     18683 TATT---CCT----------C-T---CATCA-----AGCTGCTGAGACATT---T-------ACT-TTCTGG-T-AT-T-TTTA-----AATAAA--AAC---------AAA---ACAC--AGG-GATGTGACTGACTA-----CAAAGTAAGCGAG--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAGCTAAA--AAT---AAAA-------T-GA-A
i Glis_glis.GliGli_scaffold_79770                       C 0 I 52
s Gorilla_beringei.k141_111300                               5175 141 -     14630 TATT---CCA----------C-T---CACCA-----AACTGCTAAGACATT--TT-------ATT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----TGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATAAGCTAAA--AAT---AAAA-------T-GA-A
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119652274 141 - 195582420 TATT---CCA----------C-T---CACCA-----AACTgctaagacatt--tt-------att-ttctgg-t-at-t-ttga-----aatgaa--aac---------aaa---acac--aag-aatGTGA----TGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATcataagctaaa--aat---aaaa-------t-ga-a
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   77462 104 +    118900 ---------------------------------------------------------------------TGG-T-AT-T--TGA-----AACAAA--AAC---------AAA---ACAT--AAG-AATGTGA----CTA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAGCTAAA--AAT---AAAA-------T-GA-A
i Graphiurus_murinus.GraMur_scaffold_4493               I 35 C 0
s Hapalemur_alaotrensis.k141_1280836                         1688 142 +     10286 TATT---TCA----------C-T---TACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----TGA-----TGAAGCCAGTGAA--AA-TCCA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAACTAAA--AAT---AAAA-------T-GA-A
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                              165 142 -     11661 TATT---TCA----------C-T---TACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----TGA-----TGAAGCCAGTGAA--AA-TCCA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAACTAAA--AAT---AAAA-------T-GA-A
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             5494 142 +     56096 TATT---TCA----------C-T---TACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----TGA-----TGAAGCCAGTGAA--AA-TCCA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAACTAAA--AAT---AAAA-------T-GA-A
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        28744 142 -     42470 TATT---TCA----------C-T---TACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----TGA-----TGAAGCCAGTGAA--AA-TCCA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAACTAAA--AAT---AAAA-------T-GA-A
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        45367 142 -     54384 TATT---TCA----------C-T---TACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----TGA-----TGAAGCCAGTGAA--AA-TCCA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAACTAAA--AAT---AAAA-------T-GA-A
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              17013 140 +     53719 --TT---CCA----------C-T---CACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ACAT--AAG-ACTGTGT----CGA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCGTGTGCTAAA--AAT---AAAA-------T-GA-A
i Helogale_parvula.HelPar_flattened_line_22962          C 0 I 20
s Hemitragus_hylocrius.HemHyl_scaffold_16669                27249 140 -     91191 --TT---CCA----------C-A---CATCA-----AGCTTCAGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ATAC--AAG-AATGTGT----CAA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTTTCAGGAGCTAAA--AAT---AAAG-------T-GA-A
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 3 I 20
s Heterocephalus_glaber.JH602058.1                        2550935  96 +  31725842 --------------------------------------------------------------------------------------------------aaaataaaagcaaa---acac--aag-AATGTGA----CTA-----TGAACCAAGTTAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATcatgagctaaa--aat---aaaa-------t-ga-a
i Heterocephalus_glaber.JH602058.1                      I 46 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               60444 127 +     73687 ---------------------------ACTA-----CACTGCTGAGACATC--TC-------ACT-TTCTGG-T-AT-T-TTCA-----AATATA--AAC---------AAG---ATAC--AAG-A-CGTGA----TGA-----TGAAGTAAGTGAAA-AA-TCAA-AA---GGGCACAGAC-AT-T-TT-CAAGTATCATGAGCTAAA--AAT---AAA--------------
i Heterohyrax_brucei.HetBruBak_scaffold_25354           I 9 I 89
s Hippopotamus_amphibius.HipAmp_scaffold_1308              146904 139 +    277961 --TT---CCA----------C-T---CACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ACAC--AAA-AATGTGT----CAA-----TGAAGCAAGTGA---AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTTTCATGAGCTAAA--AAT---AAAA-------T-GA-A
i Hippopotamus_amphibius.HipAmp_scaffold_1308           I 3 I 20
s Hipposideros_armiger.JXIK01001085.1                      278185 140 -    477199 --GT---CCT----------C-T---CACCT-----AGCTGCTGAGACATT--TT-------Act-ttgtgg-t-at-t-ttaa-----aatgaa--aac---------aaa---acat--aag-aatGTGT----CGA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCatgagctaaa--aag---aaaa-------a-ga-a
i Hipposideros_armiger.JXIK01001085.1                   I 3 I 79
s Hipposideros_galeritus.HipGal_scaffold_104691              7330 140 -      9143 --GT---CCA----------C-T---TACCT-----AGCTGCTGAGACATT--TT-------ACT-TTGTGG-T-AT-T-TTAA-----AATGAA--AGC---------AAA---ACAT--AAG-AAAGTGT----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAGCTGAA--AAG---AAAA-------A-TA-A
i Hipposideros_galeritus.HipGal_scaffold_104691         I 3 I 79
s Hoolock_leuconedys.ctg649                                   103604 141 +    115816 TATT---CCA----------C-T-CA--CCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----AGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATAAGCTAAA--AAT---AATA-------T-GA-A
i Hoolock_leuconedys.ctg649                                I 354 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 17083 140 -     67322 --TT---CCA----------C-T---CACCA-----TGCTGCTGAGACATT--TT-------ACT-TTATGG-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ACAT--AAG-ACTGTGT----CGA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGTTACAGAC-TT-T-TG-CAAGTATCATGTGCTAAA--AAT---AAAA-------T-GA-A
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 I 20
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           18768 109 -    119109 TATT---CTG----------C-T---CACCA-----AGCTGCTGAGATTTT--AT-------GCA-TTCTGG-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTAA----CTA-----TGAACCACGTGAA--AA-TCAA-AA---GAGTACAGAC-T--------------------------------------------------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 I 31
s Hylobates_abbotti.k141_493872                              5005 141 +      5897 TATT---CCA----------C-T-CA--CCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----AGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATTATAAGCTAAA--AAT---AATA-------T-GA-A
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_624065                               1871 141 +      2112 TATT---CCA----------C-T-CA--CCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAT-AATGTGA----AGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATAAGCTAAA--AAT---AATA-------T-GA-A
i Hylobates_agilis.k141_624065                          C 0 N 0
s Hylobates_klossii.k141_285563                                50 141 +      1026 TATT---CCA----------C-T-CA--CCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----AGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCACAAGCTAAA--AAT---AATA-------T-GA-A
i Hylobates_klossii.k141_285563                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14624552 141 -  25970782 TATT---CCA----------C-T-CA--CCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----AGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATAAGCTAAA--AAT---AATA-------T-GA-A
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            1807 141 -      2977 TATT---CCA----------C-T-CA--CCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----AGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATTATAAGCTAAA--AAT---AATA-------T-GA-A
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             33711 141 -     60944 TATT---CCA----------C-T-CA--CCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----AGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GAGTACAGAC-TT-T-AG--AAGTATCATAAGCTAAA--AAT---AATA-------T-GA-A
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     5947 142 +     22540 TATT---CTG----------C-T---CACTA-----ACCTGCTGAGGTATT--TT-------ACA-TTCTGG-T-AT-T-TTAA-----AATAAA--AAC---------AAA---ACAC--AAG-AATGTGA----TTA-----TGAACCAAGTGAA--AA-TCAA-AA---GAGTACAGAC-TT-T-TG-CATGCATCATGAGCTAAA--AAT---AAAA-------C-GC-A
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7125652 142 +  13083262 tatt---tta----------c-t---CACCA-----AGCTACTGAGACATT--TT-------ACt-ttgtgg-t-at-t-ttaa-----aataaa--aac---------aaa---acac--agg-aatCTGA----TTA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTGCAGAC-TT-C-TG-CAAGTCTtatgagctaaa--aat---aaaa-------t-ga-a
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_5141390                                    204 142 -      3181 TATT---TCA----------C-T---TACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----TGA-----TGAAGCAAGTGAG--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGCATCATGAACTAAA--AAT---AAAA-------T-GA-A
i Indri_indri.k141_5141390                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               8815 140 +     17520 --TT---CCA----------C-T---CACCA-----AGCTGCTGAGACATT--TT-------ACA-TTCTGG-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ACAC--AAG-AACGTGT----CAA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTTTCATGAGCTAAA--AAT---AAAA-------T-GA-A
i Inia_geoffrensis.IniGeo_flattened_line_66725          I 3 I 20
s Jaculus_jaculus.JH725517.1                              8565697 140 +  11848649 tacT---CCA----------C-T---CACCA-----ATCTGCTGAGACATT--TT-------GGT-TTCtgg-t-at-t-ttga-----aataaa--aac---------aaa---ac----aag-attgtGA----ATA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCAtgagctaaa--aat---aaaa-------t-ga-a
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               23431 140 +     37189 --TT---CCA----------C-T---CACCA-----AGCTGCTGAGACATT--TT-------ACA-TTCTGG-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ACAC--AAG-AACGTGT----CAA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTTTCATGAGCTAAA--AAT---AAAA-------T-GA-A
i Kogia_breviceps.KogBre_flattened_line_35920           I 3 I 20
s Lagothrix_lagothricha.k141_12968                          50043 142 -    147782 ATTT---CTA----------C-T---CACCA-----AACTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAGCTAAA--AAT---AAAA-------T-GA-A
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   114052 135 -    115756 --TT---CCA----------T-T---CACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-T-GA-----AATAAA--AGC---------AAA---ACAT--AAG-AATGTGT----T--------GAAGCAAGTGAA--AA-TCAA-AA---GGATACAGAC-TT-A-TG-CAAATATCATGAGCTAAA--AAT---AAAA-------T--A-A
i Lasiurus_borealis.LasBor_scaffold_5102                I 3 I 20
s Lemur_catta.scaffold_1                                258407050 142 - 285822530 TATT---TCA----------C-T---TACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----TGA-----TGAAGCAAGTGAA--AA-TCCA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAACTAAA--AAT---AAAA-------T-GA-A
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        23794 142 +     39228 TATT---TCA----------C-T---TACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGA-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----TGA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAACTAAA--AAT---AAAA-------T-GA-A
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            53178 142 +     63517 TATT---TCA----------C-T---TACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGA-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----TGA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAACTAAA--AAT---AAAA-------T-GA-A
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        78439 142 +    116806 TATT---TCA----------C-T---TACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGA-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----TGA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAACTAAA--AAT---AAAA-------T-GA-A
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     31433 142 -     33031 TATT---TCA----------C-T---TACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGA-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----TGA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAACTAAA--AAT---AAAA-------T-GA-A
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3085777 140 -   3498232 --tt---cCA----------C-T---CACCA-----GGCTGCTGAGACATT--TT-------ACt-ttctgg-t-at-t-ttaa-----aatgaa--aac---------aaa---acac--aag-aatgTGT----CAA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTACCatgagctaaa--aat---aaaa-------t-ga-a
i Leptonychotes_weddellii.KB714749.1                    C 0 I 20
s Lepus_americanus.LepAme_scaffold_62849                    13057 142 +     22452 GATT---CTG----------C-T---CACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTTA-----AATGAA--AAC---------AAA---ACAC--ACG-AATGTGA----CGA-----TCAAATGAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAGCTAAA--AAT---AAAA-------G-GA-A
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            135771 140 +   3060487 --tt---ccA----------C-T---CACCA-----AGCCACTGAGACATT--TT-------ACA-TTctgg-t-at-t-ttaa-----aatgaa--aac---------aaa---acac--aag-aacGTGT----CAA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTTTCatgagctaaa--aat---aaaa-------t-ga-a
i Lipotes_vexillifer.KE558548.1                         I 3 I 20
s Lophocebus_aterrimus.ctg55                             19248189 141 +  19376315 TATT---CCA----------C-T---ATCCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATAAGCTAAA--AAT---AAAA-------T-GA-A
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           10494 142 +     84689 TATT---CCA----------C-T---TACCA-----AGCTGCTGAGACATT--TT-------AAT-TTCTGG-T-AT-T-TTAA-----AATGTA--AAC---------AAG---ACAC--AAG-AATGTGA----CGA-----AGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TA-CAAGTATCATGAACTAAA--AAT---AAAA-------T-GA-A
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3778244 142 +   6799190 TATT---CCA----------C-T---TACCA-----AGCTGCTGAGACATT--TT-------AAT-TTCTGG-T-AT-T-TTAA-----AATGTA--AAC---------AAG---ACAC--AAG-AATGTGA----CGA-----AGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAACTAAA--AAT---AAAA-------T-GA-A
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20594025 136 -  62548349 C-TT----CG----------C-T---CACCA-----AGCTGGCAAGAAATT--TC-------ACT-TTCTGA-C-AT-T-TTca-----aacata--aac---------aaa---atac--aag-aaagtgA----TGA-----TGAAGTAAGTGAAA-AA-TCAA-AA---GGGTACAGAC-AT-T-TT-CAAGTATCATgagctaaa--aat---aaa--------------
i Loxodonta_africana.GL010040.1                         I 2 I 25
s Lycaon_pictus.CM007556.1                               11087924 135 +  39895028 --CT---CCA----------C-T---CACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCtgg-t-at-t-ttga-----aatgaa--aac---------aaa---acac--aag-aatgTGT----CAA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCAtgagctaaa--aat---aaa--------------
i Lycaon_pictus.CM007556.1                              C 0 I 23
s Macaca_arctoides.k141_2201161                             19925 141 +     74745 TATT---TCA----------C-T---ATCCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ATAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATAAGCTAAA--AAT---AAAA-------T-GA-A
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12706381 141 +  12821369 TATT---TCA----------C-T---ATCCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATAAGCTAAA--AAT---AAAA-------T-GA-A
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                2023 141 -      3136 TATT---TCA----------C-T---ATCCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATAAGCTAAA--AAT---AAAA-------T-GA-A
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           46841 141 +     63263 TATT---TCA----------C-T---ATCCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATAAGCTAAA--AGT---AAAA-------T-GA-A
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                 1546 141 -      2568 TATT---TCA----------C-T---ATCCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATAAGCTAAA--AAT---AAAA-------T-GA-A
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 2131 141 -      7381 TATT---TCA----------C-T---ATCCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATAAGCTAAA--AAT---AAAA-------T-GA-A
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  45348 141 -     79256 TATT---TCA----------C-T---ATCCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATAAGCTAAA--AAT---AAAA-------T-GA-A
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196035455 141 + 196197964 TATT---TCA----------C-T---ATCCA-----AGCTGCTGAGACATT--TT-------ACT-TTCtgg-t-at-t-ttga-----aatgaa--aac---------aaa---acac--aag-aatgTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATcataagctaaa--aat---aaaa-------t-ga-a
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11445625 141 +  11645122 TATT---TCA----------C-T---ATCCA-----AGCTGCTGAGACATT--TT-------ACT-TTCtgg-t-at-t-ttga-----aatgaa--aac---------aaa---acac--aag-aatgTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATcataagctaaa--aat---aaaa-------t-ga-a
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   4295 141 -     46448 TATT---TCA----------C-T---ATCCA-----AGCTGCCGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGCTACAGAC-TT-T-AG--AAGTATCATAAGCTAAA--AAT---AAAA-------T-GA-A
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                1969 141 -     13212 TATT---TCA----------C-T---ATCCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATAAGCTAAA--AAT---AAAA-------T-GA-A
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 15648 141 -     55006 TATT---TCA----------C-T---ATCCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATAAGCTAAA--AAT---AAAA-------T-GA-A
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43840764 141 +  43892939 TATT---TCA----------C-T---ATCCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATAAGCTAAA--AAT---AAAA-------T-GA-A
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               16934 141 -     24607 TATT---TCA----------C-T---ATCCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATAAGCTAAA--AAT---AAAA-------T-GA-A
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               4300 141 -     27140 TATT---TCA----------C-T---ATCCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GCCTACAGAC-TT-T-AG--AAGTATCATAAGCTAAA--AAT---AAAA-------T-GA-A
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                701390 129 +    802869 --TT---TCA----------C-T---CATCA-----AGCTGCTGAGACATT--TT-------ACT-TAGTGG-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGT----CAA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-TAAGTATCATGAGCTAAA-------------------------
i Macroglossus_sobrinus.MacSob_scaffold_879             I 3 I 78
s Mandrillus_leucophaeus.scaffold125                     43437349 141 -  43563597 TATT---CCA----------C-T---ATCCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATAAGCTAAA--AAT---AAAA-------T-GA-A
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4450169 141 -   4543643 TATT---CCA----------C-T---ATCCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATAAGCTAAA--AAT---AAAA-------T-GA-A
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            145416 143 +    252755 --CTTTTCCA----------C-T---CACCA-----AGCTGCTGAGACATT--TT-------ACT-Ttctgg-t-at-t-ttaa-----aatgaa--aac---------aaa---atac--aag-aatgtgt----caa-----tgaagcaagtgaa--aa-tcaa-aa---GGGTACAGAC-TT-T-TG-CAAGTATCAtgagctaaa--aat---aaaa-------t-ga-a
i Manis_javanica.JSZB01003966.1                         C 0 I 20
s Manis_pentadactyla.KN017078.1                             35493 143 +     58827 --CTTTTCCA----------C-T---CACCA-----AGCTGCTGAGACATT--TT-------ACT-TTctgg-t-at-t-ttaa-----aatgaa--aac---------aaa---atac--aag-aatgtgt----caa-----tgaagcaagtgaa--aa-tcaa-aa---GGGTACAGAC-TT-T-TG-CAAGTATCAtgagctaaa--aat---aaaa-------t-ga-a
i Manis_pentadactyla.KN017078.1                         C 0 I 20
s Marmota_marmota.CZRN01000005.1                         36873492 142 +  64221397 tatt---tta----------c-t---CACCA-----AGCTGCTGAgacatt--tt-------act-ttttgg-t-at-t-ttaa-----aataaa--aac---------aaa---acac--agg-aatCTGA----TTA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTGCAGAC-TT-C-TG-CAAGTCTcatgagctaaa--aat---aaaa-------t-ga-a
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       64208 141 -    234502 --TT---CGA----------T-T---CACCA-----AGCTGCTGAGACACT--TT-------ACT-TTGTGG-T-AT-T-TTGA-----AATAAA--AAC---------AAA---ACAC--AAG-ATTATGT----CGA-----CAAAGCAAGTGAA-TTA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAGCTAAA--AAT---AAAA-------A-GG-A
i Megaderma_lyra.MegLyr_scaffold_3562                   I 3 I 18
s Mellivora_capensis.MelCap_flattened_line_15433              781 140 -     87323 --TT---CCA----------C-T---CACCA-----AGCGGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGT----CAA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAGCTAAA--AAT---AAAA-------T-GA-A
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 I 20
s Meriones_unguiculatus.MerUng_scaffold_52233               12549  66 +     15977 CATT---CCA----------T-T---CTCTA-----AGCGGGTGAGACATT---T-------AGT-TTTTGA-T-AT-T-TTGA-----AATAAA--AAC---------AAA---ACCT--ATG--------------------------------------------------------------------------------------------------------------
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 I 53
s Mesocricetus_auratus.KB708139.1                         1046742 141 -  26018355 TATT---CCA----------T-T---CTCCA-----AATGACAGAGACATT---T-------AGT-TTCTGG-T-AT-t-ttga-----gataaa--aac---------aaa---acat--atg-aatGTGA----ATATGAAG-----TAAGTGCA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCAtgagctaaa--aat---aaaa-------t-ga-a
i Mesocricetus_auratus.KB708139.1                       C 0 I 85
s Mesoplodon_bidens.MesBid_scaffold_227248                    105 140 -      1377 --TT---CCA----------C-T---CACCA-----AGCTGCTGAGACATT--TT-------ACA-TTCTGG-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGT----CAA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAGCTAAA--AAT---AAAA-------T-GA-A
i Mesoplodon_bidens.MesBid_scaffold_227248              I 3 I 20
s Microcebus_murinus.CM007691.1                          16510065 142 +  47401472 tatt---tCA----------C-T---TACCA-----AGCTGCTGAGACATT--TT-------ACT-Ttctgg-t-at-t-ttaa-----aatgaa--aac---------aaa---acac--aag-aatgTGA----TGA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTAtcatgaactaaa--aat---aaaa-------t-ga-a
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  34294  95 -     48017 T-TC----CA----------C-T---AACCA-----AGATGTCGAGGCATT--TT-------ACT-TTCCGG-T-AT-T--TAA-----AATGTA--AAC---------AAA---CCAT--AAG-AATGTGA----TAA-----GGAAGCAAGCGAAA-AA-TCAA-A------------------------------------------------------------------
i Microgale_talazaci.MicTal_scaffold_34660              I 2 I 64
s Micronycteris_hirsuta.MicHir_scaffold_37978               22489 140 -     32043 --TT---CTA----------T-T---CACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ACAT--GAG-AACTTGC----TGA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCACGAGCTAAA--AAT---AAAA-------T-GA-A
i Micronycteris_hirsuta.MicHir_scaffold_37978           I 3 I 20
s Microtus_ochrogaster.CM001673.1                        22819879 141 -  98408828 TATT---CCA----------C-T---CTTCG-----TGTGACTGAGACATT---T-------AGT-TTCTgg-t-at-t-ttag-----aataaa--aac---------aaa---acat--atg-aaTGTGA----ATATGAAG-----TAAGTGCA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGCATCGtgagctaaa--aat---aaaa-------g-aa-a
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8209485 140 +  10048721 --TT---CCA----------T-T---CACCA-----AGCTGCTGAGACATT--TT-------Act-ttctgg-c-at-t-ttaa-----aatgaa--aac---------aaa---acac--aag-aatgTGT----CGA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCAtgagctaaa--aat---aaaa-------t-ga-a
i Miniopterus_natalensis.LDJU01000022.1                 I 3 I 78
s Miniopterus_schreibersii.MinSch_scaffold_24116            34139 140 +     45743 --TT---CCA----------T-T---CACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGT----CGA-----TGAAGCAAGTAAA--AA-TCAA-AA---GGGTACAGGC-TT-T-TG-CAAGTATCATGAGCTAAA--AAT---AAAA-------T-GA-A
i Miniopterus_schreibersii.MinSch_scaffold_24116        I 3 I 78
s Miopithecus_ogouensis.k141_2935907                         1897 141 +     29742 TATT---CCG----------C-T---ATCCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATATGCTAAA--AAT---AAAA-------T-GA-A
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        11290 140 -    104932 --TT---CCA----------C-T---CACCA-----GGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGT----CAA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTACCATGAGCTAAA--AAT---AAAA-------T-GA-A
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 I 20
s Mirza_zaza.k141_226143                                     5454 142 +      8497 TATT---TCA----------C-T---TACCA-----AGATGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----TGA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-C-TG-CAAGTATCATGAACTAAA--AAT---AAAA-------T-GA-A
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 146200 140 +    154973 --TT---CCA----------C-T---CACCA-----AGCTGCTGAGACATT--TT-------ACA-TTCTGG-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ACAC--AAG-AACGTGT----CAA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTTTCATGAGCTAAA--AAT---AAAA-------T-GA-A
i Monodon_monoceros.MonMon_M_scaffold_5598              I 3 I 20
s Mormoops_blainvillei.MorMeg_scaffold_2952                161013 140 +    265003 --TT---CCA----------T-T---CATCA-----AGCTGCTGAGACATT--TT-------ACT-TTCCGG-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ACAC--AAG-AAGATGT----CGA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TA-CAAGTATCATGAGCTAAA--AAT---AAAA-------T-GA-A
i Mormoops_blainvillei.MorMeg_scaffold_2952             I 3 I 79
s Moschus_moschiferus.MosMos_scaffold_78805                  1280 140 -     19904 --TT---CCA----------C-T---CATCA-----AGCTGCAGAGACATT--TT-------ACT-TACTGG-T-AT-T-TTAA-----CATGAA--AAC---------AAA---ATAC--AAG-AATGTGT----CAA-----TGAAGCAAGTGAA--AA-TCAA-AA---GAGTACAGAC-TT-T-TG-CAAGTTTCAGGAGCTAAA--AAT---AAAG-------T-GA-A
i Moschus_moschiferus.MosMos_scaffold_78805             I 3 I 20
s Mungos_mungo.MunMun_flattened_line_8729                  144708 140 -    168139 --TT---CCA----------C-T---CACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTAA-----GATGAA--AAC---------AAA---ACAT--AAG-ACTGTGT----CGA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGTGCTAAA--AAT---AAAA-------T-GA-A
i Mungos_mungo.MunMun_flattened_line_8729               C 0 I 20
s Murina_feae.MurFea_scaffold_2254                          19333 135 -    100666 --TT---CCA----------T-T---CACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-T-GA-----AATAAA--AGC---------AAA---ACAT--AAA-AATGTGT----T--------GAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGGGCTAAA--AAT---AAAA-------T--A-A
i Murina_feae.MurFea_scaffold_2254                      I 3 I 20
s Mus_caroli.LT608236.1                                  70766383 136 +  92629107 taAT---CTA----------C-T---TTCCA-----AGTGGCTGAGACACT---T-------agt-ttttgg-t-at-t-ttga-----gataaa--aac---------aaa---acat--aca-aatgtGA----ATATGAAG---------TAGA--AA-TCAA-AA---GGGTACAGAC-T--T-TG-CAAGTACCATGagctaaa--aat---aaaa-------g-ga-g
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75489442 136 +  98207768 tAAT---CTA----------C-T---TTCCA-----AGTGGCTGAGACACT---T-------AGT-TTTTGG-T-at-t-ttaa-----gataaa--aac---------aaa---acat--gca-aATGTGA----ATATGAAG---------TAGA--AA-TCAA-AA---GGGTACAGAC-T--T-TG-CAAGTATCATGagctaaa--aat---aaaa-------g-ga-a
i Mus_musculus.chr16                                    C 0 I 1
s Mus_pahari.LT608305.1                                  67555670 140 +  89017189 taTT---CTA----------A-T---CTCCC-----AGTGGCTGAGACATG---T-------AGT-ATTTGG-T-AA-t-ttga-----gataaa--aac---------aaa---acac--aca-aatgtgA----ATATGAAG-----TAAGTAGT--AA-TTAA-AA---GGGTAAAGAC-T--T-TG-CAAGTAtcatgagataaa--aat---aaaa-------g-gg-a
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74330619 136 +  97876770 taAT---CTA----------C-T---TTCCA-----AGTGGCTGAGACACT---T-------AGT-TTTTgg-t-at-t-ttaa-----gataaa--aac---------aaa---acat--ata-aatgtGA----ATATGAAG---------TAGA--AA-TCAA-AA---GGGTACAGAC-T--T-TG-CAAGTATCGTgagctaaa--aat---aaaa-------g-ga-a
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             11653 140 +     98495 TATT---TCT----------C-T---CATCA-----AGCCGCCAAGACATT---T-------GCT-TTCTGG-T-AT-T-TTGA-----AATAAA--AAC---------AAA---ACCC--AGG-AATGTGA----CTA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCAAGAGCTAAA--A-T---TAAA-------T-GA-A
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 I 52
s Mustela_putorius.JH417978.1                             4424150 141 -  28371801 --TT---CCA----------C-T-C-CACCA-----AGCTGCTGAGACATT--TT-------ACt-ttctgg-t-at-t-ttaa-----aatgaa--aac---------aaa---acac--aag-aatgtGT----CAA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATcatgagctaaa--aat---aaaa-------t-ga-a
i Mustela_putorius.JH417978.1                           C 0 I 20
s Myocastor_coypus.MyoCoy_scaffold_3653                     89804 109 -    117718 TATT---CTG----------C-T---CACCA-----AGCTGCTGAGATATT--AT-------ACA-TTCTGG-C-AT-T-TTAA-----AATTAA--ATC---------CCA---ACAC--AAG-AGCGTGA----CTG-----TAAGCCAAGGGGA--AA-TCAA-AA---GGGTACAGAC-T--------------------------------------------------
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 I 46
s Myotis_brandtii.KE161952.1                               967644 135 +   8389877 --AT---CCA----------T-T---CACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-at-t-t-ga-----aataaa--agc---------aaa---acat--aag-AATGTGT----T--------GAAGCAAATGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCatgagctaaa--aat---aaaa-------t--a-a
i Myotis_brandtii.KE161952.1                            I 3 I 20
s Myotis_davidii.KB114863.1                               5019321 135 +   6462685 --tt---cca----------T-T---CACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-at-t-t-ga-----aataaa--agc---------aaa---acat--aag-AATGTGT----T--------GAAGCAAATGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TT-CAAGTATcataagctaaa--aat---aaaa-------t--a-a
i Myotis_davidii.KB114863.1                             I 3 I 20
s Myotis_lucifugus.GL429887.1                             3465226 135 -   3747815 --TT---CCA----------T-T---CACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-At-t-t-ga-----aataaa--agc---------aaa---acat--aag-AATGTGT----T--------GAAGCAAATGAA--AA-TCAA-AA---GGGTACAGAT-TT-T-TG-CAAGTATCatgagctaaa--aat---aaaa-------t--a-a
i Myotis_lucifugus.GL429887.1                           I 3 I 20
s Myotis_myotis.MyoMyo_scaffold_6123                        10439 135 +     66751 --TT---CCG----------T-T---CACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-T-GA-----AATAAA--AGC---------AAA---ACAT--AAG-AATGTGT----T--------GAAGCAAATGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAGCTAAA--AAT---AAAA-------T--A-A
i Myotis_myotis.MyoMyo_scaffold_6123                    I 3 I 20
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             4843 133 -      8794 T-TC----CA----------C-T---CACCA-----AATTGTTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTAA-----AATAAA--AAC---------AAA---ACAC--AAA-GATGTGA----TGA-----TGAGGTAGGTGAA--AA-TCAA-AA---GGGT--AGGC-AT-T-TT-CAAGTATCATGAGCTAAA--AAT---GAA--------------
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 I 25
s Nannospalax_galili.KL201303.1                            118495  87 +    362372 --------------------------CTCCA-----AGCTGCTGAGACATT--TT-------AGT-TTTtgg-t-at-t-ttga-----aataaa--aac---------aaa---acat--aag-aatGTGA----ATATGAAT-----CAAGTGAA--AA-tcaa--------------------------------------------------------------------
i Nannospalax_galili.KL201303.1                         I 8 I 44
s Nasalis_larvatus.k141_153429                               8405 141 +     48152 TATT---CCA----------C-T---AACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----AGA-----TGAAGCaagtgaa--aa-gtaa-aa---gggtacagac-tt-t-ag--aagtatcataagctaaa--aat---aaaa-------t-ga-a
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4484682 140 -  14209539 --tt---cCA----------C-T---CACCA-----GGCTGCTGAGACATT--TT-------ACt-ttctgg-t-at-t-ttaa-----aatgaa--aac---------aaa---acac--aag-aatgTGT----CAA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTACCAtgagctaaa--aat---aaaa-------t-ga-a
i Neomonachus_schauinslandi.NINY01007774.1              C 0 I 20
s Neophocaena_asiaeorientalis.KZ688543.1                  3950812 140 -   4490290 --tt---CCA----------C-T---CACCA-----AGCTGCTGAGACATT--TT-------ACA-TTctgg-t-at-t-ttaa-----aatgaa--aac---------aaa---acac--aag-aacGTGT----CAA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTTTCAtgagctaaa--aat---aaaa-------t-ga-a
i Neophocaena_asiaeorientalis.KZ688543.1                I 3 I 20
s Noctilio_leporinus.NocLep_scaffold_12062                  49107 141 +     94413 --TT---CCA----------T-T---TCTCA-----ATCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTTG-----AGTGAA--AAC---------AAA---ACAA--AAG-AACATGT----CAA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TCCT-TG-CAAGTATCAGGAGCTAAA--AAT---AAAA-------T-GA-A
i Noctilio_leporinus.NocLep_scaffold_12062              I 3 I 20
s Nomascus_annamensis.k141_1439838                           2754 141 +      3718 TATT---CCA----------C-T-CA--CCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----AGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATAAGCTAAA--AAT---AATA-------T-GA-A
i Nomascus_annamensis.k141_1439838                      I 96 n 141
s Nomascus_concolor.k141_226614                              1110 141 -      5092 TATT---CCA----------C-T-CA--CCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----AGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATAAGCTAAA--AAT---AATA-------T-GA-A
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_39679                               78 144 -     17937 TATT---CCA----------C-T-CA--CCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACGC--AAG-AATGTGA----AGA-----TGAAGCAAGTGAA--AA-TTAA-AAAAAGGGTACAGAC-TT-T-AG--AAGTATCATAAGCTAAA--AAT---AATA-------T-GA-A
i Nomascus_gabriellae.k141_39679                        C 0 I 131
s Nomascus_siki_b.tarseq_80                             24828 141 -  18771707 TATT---CCA----------C-T-CA--CCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----AGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATAAGCTAAA--AAT---AATA-------T-GA-A
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  2531 141 +      4512 TATT---CCA----------C-T-CA--CCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----AGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATAAGCTAAA--AAT---AATA-------T-GA-A
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                30725 135 +   3668941 --cT---CCA----------C-T---CACCA-----AGCTGCTGAGACATT--TT-------ACT-TTAtgg-t-at-t-ttga-----aatgaa--aac---------aaa---acac--aag-aatgTGT----CAA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCAtgagctaaa--aat---aaa--------------
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 I 23
s Nycticebus_bengalensis.LG16                            65566933 141 -  95554990 TATC---CCA----------C-T---TACCA-----AGCTGCTGAGACA-T--TT-------AAT-TTCTGG-T-AT-T-TTAA-----GATGTA--AAC---------AAA---ACGC--AAG-AATGTGA----CGA-----AGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAA-TT-T-TG-CAAGTATCATGAACTAAA--AAT---AAAA-------T-GA-A
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            3659 141 +      6470 TATC---CCA----------C-T---TACCA-----AGCTGCTGAGACA-T--TT-------AAT-TTCTGG-T-AT-T-TTAA-----GATGTA--AAC---------AAA---ACGC--AAG-AATGTGA----CGA-----AGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAA-TT-T-TG-CAAGTATCATGAACTAAA--AAT---AAAA-------T-GA-A
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65669263 149 +  89412551 TATT---CCA----------C-T---TACCA-----AGCTGCTGAGACATT--TT-------AAT-TTCTGG-T-AT-T-TTAA-----GATGTA--AAC---------AAA---ACGC--AAG-AATGTGA----TGA-----AGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAA-TT-T-TG-CAAGTATCATGAACTAAA--AAT---AAAATAAAATTT-GA-A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4995806 141 -  23139505 TATT---CTG----------C-T---CACCA-----GTCTACTGAGACATT--TT-------GCT-TTctgg-t-at-t-ttta-----aatgaa--aac---------aaa---acac--acg-GATGTGA----CGA-----TAAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGGC-T--T-TG-CAAGTAGcttgagttaaa--aat---aaaa-------g-aa-a
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3685360 109 +  10294119 TGTT---CTA----------T-T---CACCA-----AGCTGCCAAAATATT--AT-------ACA-Ttctgg-t-at-t-ttaa-----aataaa--aac---------aca---acac--aag-AATGTGA----CTA-----TAAATCAAGTAGA--AA-TCAA-AA---GGGCACAGAC-T--------------------------------------------------
i Octodon_degus.JH651621.1                              C 0 I 46
s Odobenus_rosmarus.KB229369.1                             679345 140 -   3126709 --tt---CCT----------C-T---CACCA-----GGCTGCTGAGACATT--TT-------ACt-ttctgg-t-at-t-ttaa-----aatgaa--aac---------aaa---acac--aag-aatgTGT----CAA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTACCatgagctaaa--aat---aaaa-------t-ga-a
i Odobenus_rosmarus.KB229369.1                          C 0 I 20
s Odocoileus_virginianus.KZ101650.1                       1079487 140 +   1425656 --TT---CCA----------C-T---CATCA-----AGCTGCAGAGACATT--TT-------ACT-Ttctgg-t-at-t-ttaa-----aatgaa--aac---------aaa---atac--aag-aatgtgt----caa-----tgaagcaagtgaa--aa-tcaa-aa---GGGTACAGAC-TT-T-TG-CGAGTTTCAggagctaaa--aat---aaaa-------t-ga-a
i Odocoileus_virginianus.KZ101650.1                     I 3 I 20
s Okapia_johnstoni.LVCL01S0017931.1                         36784 140 +     78940 --tt---ctA----------C-T---CATCA-----AGCTGCAGAGACATT--TT-------ACT-Ttctgg-t-at-t-ttaa-----aatgaa--aac---------aaa---atac--aag-aatgtgt----caa-----tgaagcaagtgaa--aa-tcaa-aa---GGGTACAGAC-TT-T-TG-CAAGTTTCAGgggctaaa--aat---aaaa-------t-ga-a
i Okapia_johnstoni.LVCL01S0017931.1                     I 3 I 20
s Ondatra_zibethicus.OndZib_scaffold_6821                  125132 141 +    145789 TATT---CCA----------C-T---CTGCG-----TGCGACTGAGACATT---T-------AGT-TTCTGG-T-AT-T-TTGA-----AATAAA--AAC---------AAA---ACAT--ATG-AATGTGA----ATATGAAG-----TAAGTGCA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGCATCGTGAGCTAAA--AAT---AAAA-------G-GA-A
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  36932 141 +     62360 CATT---CCA----------C-T---CTCCA-----AGCGACTGAGACATT---T-------AGT-TTCTGG-A-AT-T-TTGA-----AATAAA--AAC---------AAA---ACAT--ATG-AATGTGA----ATATGAAG-----TAAGTGCA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAGCTAAA--AAT---AAAA-------T-GA-A
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7224497 140 -   7562323 --tt---CCA----------C-T---CACCA-----AGCTGCTGAGACATT--TT-------ACA-TTctgg-t-at-t-ttaa-----aatgaa--aac---------aaa---acac--aag-aacGTGT----CAA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTTTCatgagctaaa--aat---aaaa-------t-ga-a
i Orcinus_orca.KB316965.1                               I 3 I 20
s Orycteropus_afer.OryAfe_flattened_line_13509              57339 132 -     66828 T-TC----CA----------C-T---CAACA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTAA-----AATATA--AAC---------AAA---CA----CAG-AACGTGA----TGA-----TGAAGTAAGTGAAA-AA-TCAA-AA---GGGTACAGTC-AT-T-TT-CAAGTATCATGAACTAAA--AAT-----A--------------
i Orycteropus_afer.OryAfe_flattened_line_13509          I 2 I 52
s Oryctolagus_cuniculus.CM000803.1                      141876091 142 + 163896628 TATT---CTG----------C-T---CACCA-----AGCTGCTGAGACATT--TT-------ACT-TTctgg-t-at-t-ttta-----aatgaa--aac---------aaa---acac--acg-AATGTGA----CGA-----TCAAGCGAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATgagctaaa--aat---aaaa-------g-ga-a
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      308011 135 -    505867 --CT---CCA----------C-T---CACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCtgg-t-at-t-ttga-----aatgaa--aac---------aaa---acac--aag-aatgTGT----CAA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCAtgagctaaa--aat---aaa--------------
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 I 23
s Otolemur_crassicaudatus.k141_505435                         551 142 -     53940 TATT---CCA----------C-T---TACCA-----AGCTGCCGAGACATT--TT-------AAT-TTCTGG-T-AT-T-TTAA-----AATGTA--AAC---------AAA---ACAC--AAG-AATGTGA----GGA-----AGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-C-TG-CAAGTACCATGAACTAAA--AAT---AAAA-------C-GA-A
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18008531 142 -  38779656 tatt---ctA----------C-T---TACCA-----AGCTGCTGAGACATT--TT-------AAT-Ttctgg-t-at-t-ttaa-----aatgta--aac---------aaa---acac--aag-aaTGTGA----GGA-----AGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-C-TG-CAAGTAccatgaactaaa--aat---aaaa-------t-ga-a
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134077045 140 - 275406953 --tt---cCA----------C-A---CATCA-----AGCTTCAGAGACATT--TT-------ACT-TTctgg-t-at-t-ttaa-----aatgaa--aac---------aaa---atac--aag-aatgtgt----caa-----tgaagcaagtgaa--aa-tcaa-aa---GGGTACAGAC-TT-T-TG-CAAGTTTCAGGagctaaa--aat---aaag-------t-ga-a
i Ovis_aries.CM001582.2                                 I 3 I 95
s Ovis_canadensis.OviCan_scaffold_6251                      78259 140 +    140051 --TT---CCA----------C-A---CATCA-----AGCTTCAGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ATAC--AAG-AATGTGT----CAA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTTTCAGGAGCTAAA--AAT---AAAG-------T-GA-A
i Ovis_canadensis.OviCan_scaffold_6251                  I 3 I 20
s Pan_paniscus.CM003386.1                               127574541 141 - 205426864 TATT---CCA----------C-T---CACCA-----AACTGctgagacatt--tt-------att-ttctgg-t-at-t-ttga-----aatgaa--aac---------aaa---acac--aag-aatgTGA----TGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATcataagctaaa--aat---aaaa-------t-ga-a
i Pan_paniscus.CM003386.1                               I 17 C 0
s Pan_troglodytes.CM009241.2                            120151695 141 - 196562556 TATT---CCA----------C-T---CACCA-----AACTGCtgagacatt--tt-------att-ttctgg-t-at-t-ttga-----aatgaa--aac---------aaa---acac--aag-aatGTGA----TGA-----TGAAACAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATcataagctaaa--aat---aaaa-------t-ga-a
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  34124 140 +    295523 --TT---CCA----------C-T---CACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ACAT--AAG-ACTGTGT----CGA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTAACATGTGCTAAA--AAT---AAAA-------T-GA-A
i Panthera_onca.PanOnc_flattened_line_1615              C 0 I 20
s Panthera_pardus.KV860323.1                              3637860 138 +  18214204 --TT---CCA----------C-T---CACCA-----AGCTGCTGAGACATT--TT-------ACT-TTctgg-t-at-t-ttaa-----aatgaa--aac---------aaa---acat--aag-actgTGT----CGA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTAAc--gtgctaaa--aat---aaaa-------t-ga-a
i Panthera_pardus.KV860323.1                            C 0 I 20
s Panthera_tigris.KE721879.1                              5027533 140 -   6340057 --TT---CCA----------C-T---CACCA-----AGCTGCTGAGACATT--TT-------ACT-TTctgg-t-at-t-ttaa-----aatgaa--aac---------aaa---acat--aag-actgTGT----CGA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTAAcatgtgctaaa--aat---aaaa-------t-ga-a
i Panthera_tigris.KE721879.1                            C 0 I 20
s Pantholops_hodgsonii.KE114631.1                         1065905 140 -   1292953 --tt---cCA----------C-A---CATCA-----AGCTTCAGAGACATT--TT-------ACT-Ttctgg-t-at-t-ttaa-----aatgaa--aac---------aaa---atac--aag-aatgtgt----caa-----tgaagcaagtgaa--aa-tcaa-aa---GGGTACAGAC-TT-T-TG-CAAGTTTCAGGagctaaa--aat---aaag-------t-ga-a
i Pantholops_hodgsonii.KE114631.1                       I 3 I 88
s Papio_anubis.CM001492.2                               188156136 141 - 188283584 TATT---CCA----------C-T---ATCCA-----AGCTGCTGAGACATT--TT-------ACT-TTCtgg-t-at-t-ttga-----aatgaa--aac---------aaa---acac--aag-aatgTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATcataagctaaa--aat---aaaa-------t-ga-a
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             4453 141 +      5367 TATT---CCA----------C-T---ATCCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATAAGCTAAA--AAT---AAAA-------T-GA-A
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47513521 141 +  47705337 TATT---CCA----------C-T---ATCCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATAAGCTAAA--AAT---AAAA-------T-GA-A
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 67497 141 -    104429 TATT---CCA----------C-T---ATCCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATAAGCTAAA--AAT---AAAA-------T-GA-A
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    6033 141 +     14967 TATT---CCA----------C-T---ATCCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATAAGCAAAA--AAT---AAAA-------T-GA-A
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 1892 141 -      7628 TATT---CCA----------C-T---ATCCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATAAGCTAAA--AAT---AAAA-------T-GA-A
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    115586 139 -    135482 --TT---CCA----------C-T---CACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ACAT--AAG-ACTG--T----CGA-----TGAAGCAAGTGAAA-AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCGTGTGCTAAA--AAT---AAAA-------T-GA-A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 I 20
s Perodicticus_ibeanus.k141_117958                           5243 142 -     23713 TATT---CCA----------C-T---TACTA-----AGCTGCTGAGACATT--TT-------AAT-TTCTGG-T-AT-T-TTAA-----AATGTA--AAC---------AAA---ACAC--AAG-AATGTGA----TGA-----AGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAACTAAA--AAT---AACA-------T-GA-A
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            24555 142 -     27972 TATT---CCA----------C-T---TACTA-----AGCTGCTGAGACATT--TT-------AAT-TTCTGG-T-AT-T-TTAA-----AATGTA--AAC---------AAA---ACAC--AAG-AATGTGA----TGA-----AGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TC-CAAGTATCATGAACTAAA--AAT---AACA-------T-GA-A
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      44378 142 -     45160 TGTT---CTA----------C-T---CACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-TTTTGA-----AATAAA--AAC---------AAA---AC----AAG-AATTTGA----CTA-----CGCATCTAGTGAAA-AA-TCAA-AA---GGGTACAGAC-TT-T-CG-CAAGTATAGTGAGCTAAA--AAT---AACA-------T-GA-A
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4950169 141 -   8017169 CATT---CCA----------C-T---CTCCA-----AGAGACTGAGACATT---T-------AGT-TTCtgg-a-at-t-ttga-----aataaa--aac---------aaa---acat--atg-aatGTGA----ATATGAAG-----TAAGTGCA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATcatgagctaaa--aat---aaaa-------t-ga-a
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    12320  87 -     36578 --------------------------------------------------------------------------------------------------AG---------AAG---ACAC--AAG-AATGTGA----CGA-----TGAACTGAGTGAA--AA-CCAA-AA---GGGTACAGAA-TT-T-CA-CAAGTATCATGAGCTAAA--AAT---AAAA-------T-GA-A
i Petromus_typicus.PetTyp_scaffold_33007                I 41 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            121102 140 -    122454 --TT---CCA----------C-T---CACCA-----AGCTGCTGAGACATT--TT-------ACA-TTCTGG-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ACAC--AAG-AACGTGT----CAA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTTTCATGAGCTAAA--AAT---AAAA-------T-GA-A
i Phocoena_phocoena.PhoPho_flattened_line_11948         I 3 I 20
s Piliocolobus_badius.k141_1987485                           1920 141 -      5908 TATT---CCA----------C-T---AACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATAAGCTAAA--AAT---AAAA-------T-GA-A
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       2544 141 -     17985 TATT---CCA----------C-T---AACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGA-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATAAGCTAAA--AAT---AAAA-------T-GA-A
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            1911 141 +      7694 TATT---CCA----------C-T---AACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGA-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATAAGCTAAA--AAT---AAAA-------T-GA-A
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26740389 141 +  26888534 TATT---CCA----------C-T---AACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCtgg-t-at-t-ttga-----aatgaa--aac---------aaa---acac--aag-aatgTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATcataagctaaa--aat---aaaa-------t-ga-a
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            97276 128 +    112873 --TT---CCA----------T-T---CAACA-----AGCTGCTGAGACATT--TT-------ACT-TCCTGG-T-AT-T-T-AA-----AATAAA--AGC---------AAA---ACAT--AAG-AATGTGT----T--------GAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTACCATGAGCTAAA--AAT--------------------
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        I 3 I 22
s Pithecia_albicans.k141_991845                             43649 142 -     61926 TATT---CTA----------C-T---CACCA-----AACTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATATGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAGCTAAA--AAT---AAAA-------T-GA-A
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        25034 142 +     78826 TATT---CTA----------C-T---CACCA-----AACTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATATGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAGCTAAA--AAT---AAAA-------T-GA-A
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              9081 142 -     15800 TATT---CTA----------C-T---CACCA-----AACTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATATGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAGCTAAA--AAT---AAAA-------T-GA-A
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        12280 142 -     16101 TATT---CTA----------C-T---CACCA-----AACTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATATGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAGCTAAA--AAT---AAAA-------T-GA-A
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          5508 142 +      9673 TATT---CTA----------C-T---CACCA-----AACTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATATGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAGCTAAA--AAT---AAAA-------T-GA-A
i Pithecia_pissinattii.k141_1102319                     I 2 C 0
s Pithecia_pithecia.tarseq_313                           13474508 142 -  19735023 TATT---CTA----------C-T---CACCA-----AACTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATATGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAGCTAAA--AAT---AAAA-------T-GA-A
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           13412 141 -     31692 TATT---CTA----------C-T---CACCA-----AACTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATATGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAGCTAAA--AAT---AAAA-------T-G--A
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           5189 140 +     21690 --TT---CCA----------C-T---CACCA-----AGCTGCTGAGACATT--TT-------ACA-TTCTGG-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGT----CAA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTTTCATGAGCTAAA--AAT---AAAA-------T-GA-A
i Platanista_gangetica.PlaMin_flattened_line_72990      I 3 I 20
s Plecturocebus_bernhardi.k141_959214                       22751 142 +     44506 TATT---CTA----------C-T---CACCA-----AACTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAGCTAAA--AAT---AAAA-------T-GA-A
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        22963 142 +     67491 TATT---CTA----------C-T---CACCA-----AACTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAGCTAAA--AAT---AAAA-------T-GA-A
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      13203 142 -     98129 TATT---CTA----------C-T---CACCA-----AACTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAGCTAAA--AAT---AAAA-------T-GA-A
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     22803 142 +    147771 TATT---CTA----------C-T---CACCA-----AACTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAGCTAAA--AAT---AAAA-------T-GA-A
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        23058 142 -     23762 TATT---CTA----------C-T---CACCA-----AACTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAGCTAAA--AAT---AAAA-------T-GA-A
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          3522 142 -     55515 TATT---CTA----------C-T---CACCA-----AACTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAGCTAAA--AAT---AAAA-------T-GA-A
i Plecturocebus_dubius.k141_3565563                     I 1 C 0
s Plecturocebus_grovesi.k141_242819                         22876 142 +    152463 TATT---CTA----------C-T---CACCA-----AACTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAGCTAAA--AAT---AAAA-------T-GA-A
i Plecturocebus_grovesi.k141_242819                     I 2 C 0
s Plecturocebus_hoffmannsi.k141_985533                        593 142 -    119457 TATT---CTA----------C-T---CACCA-----AACTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAGCTAAA--AAT---AAAA-------T-GA-A
i Plecturocebus_hoffmannsi.k141_985533                  I 1 C 0
s Plecturocebus_miltoni.k141_841561                         12599 142 +    134592 TATT---CTA----------C-T---CACCA-----AACTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAGCTAAA--AAT---AAAA-------T-GA-A
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          23186 142 -     75465 TATT---CTA----------C-T---CACCA-----AACTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAGCTAAA--AAT---AAAA-------T-GA-A
i Plecturocebus_moloch.k141_890597                      I 2 C 0
s Pongo_abelii.NDHI03003816.1                              187063 139 -    373494 TATT---CCA----------C-T---CACCA-----AACTGCTGAGACATT--TT-------ACT-TTCtgg-t-at-t-ttga-----aatgaa--aac---------aaa-----ac--aag-aatgtga----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATcataagctaaa--aat---aaaa-------t-ga-a
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19807711 139 +  19899266 TATT---CCA----------C-T---CACCA-----AACTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA-----AC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATAAGCTAAA--AAT---AAAA-------T-GA-A
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               5653 141 -     15069 TATT---CCA----------C-T---AACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGGA--AAC---------AAA---ACAC--AAG-AATGTGA----AGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATAAGCTAAA--AAT---AAAA-------T-GA-A
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              5783 141 +     14865 TATT---CCA----------C-T---AACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----AGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATAAGCTAAA--AAT---AAAA-------T-GA-A
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                1534 127 -      9567 ---------------------------ACTA-----CACTGCTGAGACATT--TC-------ACT-TTCTGG-T-AT-T-TTCA-----AATATA--AAC---------AAG---ATAC--AAG-A-CGTGA----TGA-----CGAAGTAAGTGAAA-AA-TCAA-AA---GGGCACAGAC-AT-T-TT-CAAGTATCATGAGCTAAA--AAT---AAA--------------
i Procavia_capensis.ProCapCap_scaffold_149274           I 9 I 89
s Prolemur_simus.MPIZ01000048.1                           6848429 142 +  12164890 TATT---TCA----------C-T---TACCA-----AGCTGCTGAGACATT--TT-------ACT-Ttctgg-t-at-t-ttaa-----aatgaa--aac---------aaa---acac--aag-aatgTGA----TGA-----TGAAGCAAGTGAA--AA-TCCA-AA---GGGTACAGAC-TT-T-TG-CAAGTAtcatgaactaaa--aat---aaaa-------t-ga-a
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     16130 106 -     30946 --------------------------------------------------------------------ctgg-t-at-t-ttaa-----aatgaa--aac---------aaa---acac--aag-aatgTGA----TGA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTAtcatgaactaaa--aat---aaaa-------t-ga-a
i Propithecus_coquerelli.NW_012147863.1                 I 2121 C 0
s Propithecus_coronatus.k141_1353159                         3487 142 +     11805 TATT---TCA----------C-T---TACCA-----AGCTGCTGAGACATT--TT-------CCT-TTCTGG-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----TGA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAACTAAA--AAT---AAAA-------T-GA-A
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           42826 142 +     52369 TATT---TCA----------C-T---TACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----TGA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAACTAAA--AAT---AAAA-------T-GA-A
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         35212 142 -     44753 TATT---TCA----------C-T---TACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----TGA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAACTAAA--AAT---AAAA-------T-GA-A
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            17137 142 +     27322 TATT---TCA----------C-T---TACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----TGA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAACTAAA--AAT---AAAA-------T-GA-A
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       16773 142 -     53241 TATT---TCA----------C-T---TACCA-----AGCTGCTGAGACATT--TT-------CCT-TTCTGG-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----TGA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAACTAAA--AAT---AAAA-------T-GA-A
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         39037 142 -     48185 TATT---TCA----------C-T---TACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----TGA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAACTAAA--AAT---AAAA-------T-GA-A
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           34075 141 +     77221 cATT---CCA----------T-T---CTCCA-----AGCGGGTGAGACATt---t-------agt-ttctgt-t-at-t-ttga-----aaTAAG--CAC---------AAA---ACAT--ATA-AATGTGA----ATATGAAG-----TAAATAGA--AA-TCAA-AA---GGATACAGAC-TT-T-TG-CAAGAATCATGAGCTAGA--AAT---AAAA-------C-GA-A
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            3657 140 -     27784 --TT---CCA----------T-T---CATCA-----AGCTGCTGAGACATT--TT-------ACt-ttctgg-t-at-t-ttaa-----aatgaa--aac---------aaa---acac--aag-aacatgT----CGA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATcaagagctaaa--aat---aaaa-------t-ga-a
i Pteronotus_parnellii.KE867983.1                       I 4 I 20
s Pteronura_brasiliensis.PteBra_flattened_line_1343        246459 140 -    344369 --TT---CCA----------C-T---CACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTAA-----AATGAA--AAC---------AAA---AAAC--AAG-AATGTGT----CAA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAGCTAAA--AAT---AAAA-------T-GA-A
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 I 20
s Pteropus_alecto.KB031157.1                             13245771 147 -  17261082 --tT---CCA----------C-T---CATCA-----AGCTgctgagatatt--ttactttttact-tcgtgg-t-at-t-ttaa-----aataaa--aac---------aaa---acac--gaG-AATGTGT----CGA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAT-TT-T-TG-TAAGTATcatgagctaaa--aat---aaaa-------a-ta-a
i Pteropus_alecto.KB031157.1                            I 3 I 73
s Pteropus_vampyrus.KN525959.1                             603721 147 -   3946241 --tT---CCA----------C-T---CATCA-----AGCTgctgagatatt--ttactttttact-tcgtgg-t-at-t-ttaa-----aatgaa--aac---------aaa---acac--gaG-AATGTGT----CAA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAT-TT-T-TG-TAAGTATcatgagctaaa--aat---aaaa-------a-ta-a
i Pteropus_vampyrus.KN525959.1                          I 3 I 73
s Puma_concolor.QAVW01000427.1                          131534111 140 - 161321710 --TT---CCA----------C-T---CACCA-----AGCTGCTGAGACATT--TT-------ACT-TTctgg-t-at-t-ttaa-----aatgaa--aac---------aaa---acat--aag-actGTGT----CGA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTAAcatgtgctaaa--aat---aaaa-------t-ga-a
i Puma_concolor.QAVW01000427.1                          C 0 I 84
s Pygathrix_cinerea.k141_374971                             29771 141 +     56732 TATT---CCA----------C-T---AACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----AGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATAAGCTAAA--AAT---AAAA-------T-GA-A
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6806259 141 +   6970761 TATT---CCA----------C-T---AACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----AGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATAAGCTAAA--AAT---AAAA-------T-GA-A
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             5650 141 +     18040 TATT---CCA----------C-T---AACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----AGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATAAGCTAAA--AAT---AAAA-------T-GA-A
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                15564 140 +     68503 --TT---CCA----------C-T---CATCA-----AGCTGCAGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTAA-----GATGAA--AAA---------AAA---ATAC--AAG-AATGTGT----CAA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTTTCAGGAGCTAAA--AAT---AAAA-------T-GA-A
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 3 I 20
s Rattus_norvegicus.chr11                                13915383 141 +  90463843 tATC---CTA----------C-T---CTCCA-----AGTGGCTGAGACATT---T-------AGT-TTCTGG-T-AT-t-ttga-----agtaaa--aac---------aaa---acat--acg-AATGTGA----ATAGGAAG-----TAAGTAGA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CATGTATCGTGAGCTAAA--AAT---AATA-------G-GG-A
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1787606 140 +   2252614 --GT---CCA----------C-T---CACCA-----AGCTGCAGAGACATT--TT-------ACt-ttgtgg-t-at-t-ttaa-----aatgaa--aat---------aaa---acac--aaa-actgtgt----CGA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCatgagctaaa--aat---aaaa-------a-ga-a
i Rhinolophus_sinicus.LVEH01000179.1                    I 3 I 79
s Rhinopithecus_bieti.k119_554384                              52 151 -     17045 TATT---CCACTAACTTCCAC-T---AACCA-----AGCTGCTGAGACATT--TC-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-GATGTGA----AGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATAAGCTAAA--AAT---AAAA-------T-GA-A
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206377540 141 - 206558726 TATT---CCA----------C-T---AACCA-----AGCTGCTGAGACATT--TC-------ACT-TTCtgg-t-at-t-ttga-----aatgaa--aac---------aaa---acac--aag-gatGTGA----AGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATcataagctaaa--aat---aaaa-------t-ga-a
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44856443 151 -  45163003 TATT---CCACTAACTTCCAC-T---AACCA-----AGCTGCTGAGACATT--TC-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-GATGTGA----AGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATAAGCTAAA--AAT---AAAA-------T-GA-A
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                19096 140 +    109198 --TT---CTA----------C-T---TATCA-----AGCTACTGAGACATT--TT-------ACT-TCGTGG-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGT----TGA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-TAAGTATCATGAGCTAAA--AAT---AAAA-------A-TA-A
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            I 3 I 73
s Saiga_tatarica.SaiTat_scaffold_82192                       7731 140 +     12214 --TT---CCA----------C-T---CATCA-----AGCTTCAGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ATAC--AAG-AATGTGT----CAA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTTTCAGGAGCTAAA--AAT---AAAG-------T-GA-A
i Saiga_tatarica.SaiTat_scaffold_82192                  I 3 I 20
s Saimiri_boliviensis.NW_024100938.1                     15672614 142 -  43202129 tatt---cta----------c-t---CACCA-----AACTGCTGAGACATT--TT-------ACT-TTCtgg-t-at-t-ttga-----aatgaa--aac---------aaa---acac--aag-aatgTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-TG-CAAGTACcatgagctaaa--aat---aaaa-------t-ga-a
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        4527 142 +     34089 TATT---CTA----------C-T---CACCA-----AACTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-TG-CAAGTACCATGAGCTAAA--AAT---AAAA-------T-GA-A
i Saimiri_cassiquiarensis.k141_808270                   I 8 C 0
s Saimiri_macrodon.k141_2087127                              4469 142 -     60842 TATT---CTA----------C-T---CACCA-----AACTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-TG-CAAGTACCATGAGCTAAA--AAT---AAAA-------T-GA-A
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              4562 142 +     67014 TATT---CTA----------C-T---CACCA-----AACTGCTGAGACATT--TT-------ACT-TTCTGG-C-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-TG-CAAGTACCATGAGCTAAA--AAT---AAAA-------T-GA-A
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              4540 142 +     60816 TATT---CTA----------C-T---CACCA-----AACTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-TG-CAAGTACCATGAGCTAAA--AAT---AAAA-------T-GA-A
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 4477 142 -     76454 TATT---CTA----------C-T---CACCA-----AACTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-TG-CAAGTACCATGAGCTAAA--AAT---AAAA-------T-GA-A
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17341200 142 -  30362882 TATT---CTA----------C-T---CACCA-----AACTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTCA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAGCTAAA--AAT---AAAA-------T-GA-A
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         20559 142 -     62485 TATT---CTA----------C-T---CACCA-----AACTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----CGA-----TGAAGCAAGTGAA--AA-TTCA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAGCTAAA--AAT---AAAA-------T-GA-A
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   32083 140 -    114521 --TT---CCA----------C-T---CACCA-----AGCTTCTGAGACATT--TT-------ACT-TTATGG-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ACAC--AAG-AAAGTGT----TGA-----TGAAGCTAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-T-ACAAGTATCATGATCTAAA--A--ATA-AAA-------T-GA-A
i Scalopus_aquaticus.ScaAqu_scaffold_9300               I 3 I 20
s Semnopithecus_entellus.k141_1572367                        3264 141 +     15331 TATT---CCA----------C-T---AACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----AGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATAAGCTAAA--AAT---AAAA-------T-GA-A
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       8659 141 +     20762 TATT---CCA----------C-T---AACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----AGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATAAGCTAAA--AAT---AAAA-------T-GA-A
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         118662 141 +    130994 TATT---CCA----------C-T---AACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----AGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATAAGCTAAA--AAT---AAAA-------T-GA-A
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           37448 141 +     46263 TATT---CCA----------C-T---AACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----AGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATAAGCTAAA--AAT---AAAA-------C-GA-A
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     30566 141 +     42640 TATT---CCA----------C-T---AACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----AGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATAAGCTAAA--AAT---AAAA-------T-GA-A
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        13607 141 +     30600 TATT---CCA----------C-T---AACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----AGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATAAGCTAAA--AAT---AAAA-------T-GA-A
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  100116 141 -    120886 TCTT---CTA----------C-T---CTCCA-----CATGACTGAGACATT---T-------AGT-TTCTGG-T-AT-T-TTGA-----AATAAA--AAC---------AAA---ACAT--ATG-AATGTGA----ATATGAAG-----TAAGTGCA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCAGGAGCTAAA--AAT---AAAA-------T-GG-C
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            18655 136 +    739146 --TT---TCA----------C-T---CACTG-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-C-AA-T-TTAA-----AATGAA--AAC---------AAA---AAAT--AAG-AATGTGT----CAA-----TGAAGCAAGTGAA--AA-TCAA-GA---AGGTATAGGC-TT-T-T--CAAGTATCATGAGCTAAA--A------AAA-------T-GA-A
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 I 19
s Spermophilus_dauricus.KZ294190.1                        2239568 142 +   2842873 tatt---tta----------c-t---CACCA-----AGCTACTGAGACATT--TT-------ACt-ttgtgg-t-at-t-ttaa-----aataaa--aac---------aaa---acac--agg-aatCTGA----TTA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-C-TG-CAAGTCTcatgagctaaa--aat---aaaa-------t-ga-a
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             234580 140 -    276980 --TT---CCA----------C-T---CACCA-----CGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTAA-----GATGAA--AAC---------AAA---ACAC--AAG-AATGTGT----CAA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-C-TG-CAAGTACCATGAGCTAAA--AAT---AAAA-------T-GA-A
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 I 20
s Suricata_suricatta.SurSur_flattened_line_20339            27370 139 +     62062 --TT---CCA----------C-T---CACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ACAT--AGA-ACTGTGT----CGA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGTGCTAAA--AAT---A-AA-------T-GA-A
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 I 20
s Sus_scrofa.CM000824.4                                 189271643 141 + 218635234 --tt---ccA----------C-T---CACCA-----AGCTGCTGAGACATT--TT-------ACTTTTctgg-c-at-t-ttaa-----aatgaa--aac---------aaa---acac--aag-aatGTGT----CGA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTTTCatgagctaaa--aat---aaaa-------t-ga-a
i Sus_scrofa.CM000824.4                                 I 3 I 20
s Symphalangus_syndactylus.tarseq_24                        14813 141 -  13920577 TATT---CCA----------C-T-CA--CCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----AGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATAAGCTAAA--AAT---AATA-------T-CA-A
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_145589               6057 140 -      6213 --TT---CCA----------T-T---CACCA-----AGCTACTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGT----TGA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-AT-T-TG-CAAGTATCATGAGCTAAA--TAT---AAAA-------T-GA-A
i Tadarida_brasiliensis.TadBra_scaffold_145589          I 3 n 3
s Tamandua_tetradactyla.TamTet_scaffold_26877               14506 133 +     45698 T-TC----CA----------C-T---CACCA-----AATTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTAA-----AATAAA--AAC---------AAA---ACAC--AAA-AATGTGA----TGA-----TGAGGTAGGTGAA--AA-TCAA-AA---GGGT--AGGC-AT-T-TT-CAAGTCTCATGAGCTAAA--AAA---GAA--------------
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 I 25
s Tapirus_indicus.TapInd_scaffold_176                      806920 140 +   1148477 --TT---CCT----------C-T---CACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGT----CAA-----TGAAGCAAGCGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAGCTAAA--AAT---AAAA-------T-GA-A
i Tapirus_indicus.TapInd_scaffold_176                   I 3 I 20
s Tapirus_terrestris.TapTer_scaffold_14939                  57615 140 +     99546 --TT---CCT----------C-T---CACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGT----CAA-----TGAAGCAAGCGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTGTCGTGAGCTAAA--AAT---AAAA-------C-GA-A
i Tapirus_terrestris.TapTer_scaffold_14939              I 3 I 20
s Tarsius_lariang.k141_609102                               26335 135 +     42269 TA------CA----------C-T---CACCA-----AGCTGCTGAGAAATT--TT-------ACT-TTTTGG-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGG----CAA-----TTAAGCAAGTGAA--AA-TCAA-AA---GGGCACAGAC-TT-C-TG-CAAGTAACATGAGCTAAA--AAT---AAAA-------------
i Tarsius_lariang.k141_609102                           C 0 I 3
s Tarsius_wallacei.k141_48636                               59651 135 +     65473 TA------CA----------C-T---CACCA-----AGCTGCTGAGAAATT--TT-------ACT-TTTTGG-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGG----CAA-----TTAAGCAAGTGAA--AA-TCAA-AA---GGGCACAGAC-TT-C-TG-CAAGTAACATGAGCTAAA--AAT---AAAA-------------
i Tarsius_wallacei.k141_48636                           C 0 I 3
s Theropithecus_gelada.CM009951.1                       194007658 141 - 194193292 taTT---CCA----------C-T---ATCCA-----AGCTGCTGAGACATT--TT-------ACT-TTCtgg-t-at-t-ttga-----aatgaa--aac---------aaa---acac--aag-aatgTGA----CGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AC--AAGTCTcataagctaaa--aat---aaaa-------t-ga-a
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  5329 134 +      6782 T-TC----TA----------C-T---CACCA-----AGTTGCTGAGAC-TT--CT-------ACT-TTCTGG-T-AT-T-TTAA-----AATAAA--AAT---------GAA---ACAC--AAG-AATGTGA----TGA-----TGAAGTAAGTGAA--AA-TCAA-AA---GGGTACAGTC-AT-T-TT-CAAGCTTCATGAGCTAAA--AAT---AAA--------------
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 I 25
s Tonatia_saurophila.TonSau_scaffold_3334                  135648 140 -    259118 --TT---CTA----------T-T---CACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTAA-----CATGAA--AAC---------AAA---ACAT--GAG-AACTTGC----CGA-----CGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAGCTAAA--AAT---AAAA-------T-GA-A
i Tonatia_saurophila.TonSau_scaffold_3334               I 3 I 20
s Trachypithecus_auratus.k141_738098                        26764 141 +     38948 TATT---CCA----------C-T---AACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----AGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATAAGCTAAA--AAT---AAAA-------T-GA-A
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   20496 141 -     32910 TATT---CCA----------C-T---AACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----AGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATAAGCTAAA--AAT---AAAA-------T-GA-A
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      1882 141 -     12939 TATT---CCA----------C-T---AACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----AGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATAAGCTAAA--AAT---AAAA-------T-GA-A
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       1818 141 -     14244 TATT---CCA----------C-T---AACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----AGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATAAGCTAAA--AAT---AAAA-------T-GA-A
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           43217 141 -     54611 TATT---CCA----------C-T---AACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----AGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATAAGCTAAA--AAT---AAAA-------T-GA-A
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        1021 141 -     11566 TATT---CCA----------C-T---AACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----AGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATAAGCTAAA--AAT---AAAA-------T-GA-A
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     3197 141 -     15592 TATT---CCA----------C-T---AACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----AGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATAAGCTAAA--AAT---AAAA-------T-GA-A
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          1852 141 +     14371 TATT---CCA----------C-T---AACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----AGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATAAGCTAAA--AAT---AAAA-------T-GA-A
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                    134 141 +     12481 TATT---CCA----------C-T---AACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----AGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATAAGCTAAA--AAT---AAAA-------T-GA-A
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                          14 141 -     24393 TATT---CCA----------C-T---AGCCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----AGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATAAGCTAAA--AAT---AAAA-------T-GA-A
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       5255 141 -     28054 TATT---CCA----------C-T---AACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----AGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATAAGCTAAA--AAT---AAAA-------T-GA-A
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44660055 141 -  44834318 TATT---CCA----------C-T---AACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----AGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATAAGCTAAA--AAT---AAAA-------T-GA-A
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       2362 141 +     13828 TATT---CCA----------C-T---AACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGA----AGA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-T-AG--AAGTATCATAAGCTAAA--AAT---AAAA-------T-GA-A
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   4957 140 +     90398 --TA---CCA----------C-T---CATCA-----GACTGCAGAGACATT--TT-------ATG-TTCTGG-T-AT-T-TTTA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGCGT----CAA-----TGAAGCAAGTGAA--AA-TTAA-AA---GGGTACAGAC-TT-C-TG-CAAGTTTCAGGAGCTAAA--AAT---AAAA-------T-GT-A
i Tragulus_javanicus.TraJav_scaffold_14717              I 3 I 20
s Trichechus_manatus.JH594618.1                          16084681 136 +  31416278 T-TC----CA----------C-T---CACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCtgg-t-at-t-ttca-----aatata--aac---------aaa---acat--aAG-AATGTGA----TGA-----TGAAGTAAGTGAAA-AA-TCAA-AA---GGGTACAGAC-AT-T-TT-TAAGTATCATgagctaaa--aat---aaa--------------
i Trichechus_manatus.JH594618.1                         I 2 I 25
s Tupaia_chinensis.KB320831.1                             2792704 141 -   3938065 TATT---CTG----------C-T---CACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCtgg-t-at-t-tcaa-----aatgaa--aac---------aaa---acac--aag-gatGTGA----GTA-----CGAAGCAAGTGAA--AA-TCGA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATgagctaaa--aat---a-aa-------t-ga-a
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    4915 141 +     13056 TATT---CTG----------C-T---CACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ACAC--AAG-GATGTGA----GTA-----CGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATAAGCTAAA--AAT---A-AA-------T-GA-A
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69313212 140 -  96451834 --tt---CCA----------C-T---CACCA-----AGCTGCTGAGACATT--TT-------ACA-TTctgg-t-at-t-ttaa-----aatgaa--aac---------aaa---acac--aag-aacGTGT----CAA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTTTCatgagctaaa--aat---aaaa-------t-ga-a
i Tursiops_truncatus.MRVK01000923.1                     I 3 I 20
s Uropsilus_gracilis.UroGra_scaffold_69449                   1116 135 +     10241 --TT---CTA----------C-T---CACCA-----AGCTGCTAAGGCAAT--TT-------TCT-TTATGG-T-AT-T-TAAA----------A--AAC---------AAA---ACAC--AAG-AACGTGT----TGA-----TGAAGTGAGTGAA--AA-TCAA-AA---GGGTATAGAC-TT-T-T-ACAAGTATCATGATCCAAA--A--ATA-AAA-------G-GA-A
i Uropsilus_gracilis.UroGra_scaffold_69449              I 3 I 20
s Ursus_maritimus.KK498671.1                              6514594 140 +  28682327 --tt---cCA----------C-T---CACCA-----AGCTGCTGAGACATT--TT-------ACT-Ttctgg-t-at-t-ttaa-----aatgaa--aac---------aaa---acac--aag-aatgTGT----CAA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCAtgagctaaa--aat---aaaa-------t-ga-a
i Ursus_maritimus.KK498671.1                            C 0 I 20
s Varecia_rubra.k141_432109                                  5127 143 -     20643 TATT---TCA----------C-T---TACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ACAC--AAGAAATGTGA----TGA-----TGAAGCAAGTGAA--AA-TCCA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAACTAAA--AAT---AAAA-------T-GA-A
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             24668 143 -     33872 TATT---TCA----------C-T---TACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ACAC--AAGAAATGTGA----TGA-----TGAAGCAAGTGAA--AA-TCCA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAACTAAA--AAT---AAAA-------T-GA-A
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1524463 141 -   2331223 --tt---CTA----------C-C---CACCA-----AGCTGCTGAGACATT--TT-------ACt-ttctgg-t-at-t-ttaa-----aatgaa--aac---------aaa---acac--aag-aacGTGT----CGA-----TGAAGCAAGTGAAA-AA-TCAG-AA---GGGTACAGAC-TT-T-TG-CAAGTTTCatgagctaaa--aat---aaaa-------t-ga-a
i Vicugna_pacos.KN269600.1                              I 3 I 41
s Vulpes_lagopus.VulLag_flattened_line_2045                138105 135 -    281493 --CT---CCA----------C-T---CACCA-----AGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGT----CAA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAGCTAAA--AAT---AAA--------------
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 I 23
s Xerus_inauris.XerIna_scaffold_7898                       126684 143 -    134049 TATT---TTG----------C-T---CACCA-----AGCTACTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTAA-----AATAAA--AAC---------AAA---ACAC--AGG-AATCTGA----TTA-----TGAAGCAAGTGAAA-AA-TCAA-AA---GGGTGCAGAC-TT-C-TG-CAAGTCTCGTGAGCTAAA--AAT---AAAA-------T-GA-A
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        214071 140 -    227762 --TT---CCT----------C-T---CACCA-----GGCTGCTGAGACATT--TT-------ACT-TTCTGG-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGT----CAA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTACCATGAGCTAAA--AAT---AAAA-------T-GA-A
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 I 20
s Zapus_hudsonius.ZapHud_scaffold_64392                     14791 144 -     20485 TATT---TCA----------C-T---CACCA-----ATCTGCTGAGACATT--TT-------GGT-TTCTGG-T-AT-T-TTGA-----AATGAA--AAC---------AAA---ACATAAAAA-AATGTGA----CTA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGTGCTAAA--AAT---AAAA-------C-GA-A
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           6712 140 -      8775 --TT---CCA----------C-T---CACCA-----AGCTGCTGAGACATT--TT-------ACA-TTCTGG-T-AT-T-TTAA-----AATGAA--AAC---------AAA---ACAC--AAG-AATGTGT----CAA-----TGAAGCAAGTGAA--AA-TCAA-AA---GGGTACAGAC-TT-T-TG-CAAGTATCATGAGCTAAA--AAT---AAAA-------T-GA-A
i Ziphius_cavirostris.ZipCav_flattened_line_127025      I 3 I 20
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             38964   0 -     47444 C
e Sorex_araneus.JH798170.1                               17750754 3364 -  27805282 I
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               11798 132 +    209709 A------------------------CAAATCTGTAAAGGAACCAAAA-GC-CC--------A-G--------GTA-GA--TA-T----AAT--ACA--GTA--AATTATGA-----------GA-A--G--C-T--------A---------A---A---A------AAA---A---------------------TGA-G---GAGG-TGATAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------C------T---------A--------C--T-TGAATGGCA-GTC
s Acinonyx_jubatus.LLWD01000356.1                         2033932 128 +   3721120 -------------------------caaatctgtaaGAGAACTAAAT-GC-C-T-------A-G--------GAA-GA--TA-T----AAC-CCCA--GTA--AATTATGA-----------AA-A--G--C-T--------A-TGG-----A---A---A-------A----A-----------------------A-G---GAAG-TAACAAA---CA----A-AGT-A-AA------A-AT-CC-----------------C-Tgat-aaagc----------c----aa------------a-a--------------------a------a---------a--------a--t-tgGATGGCA-GTc
i Acinonyx_jubatus.LLWD01000356.1                       I 20 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    112548  86 -    189883 AAGGT-TTG-AAGTCTTA-AA-GA-CAAATCTGTAAAGTCTCT--AA-GC-CT--------A-G--------GCA-TA--TA-T----AACTA-CA--GTA--AATGACAG-----------A-CA--T--C-A--------A-G--AAAAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 I 66
s Ailuropoda_melanoleuca.LNAT01000321.1                  10657266 131 +  23371972 -------------------------caaatctgtaaGAGAACTAAAA-GC-C-T-------A-G--------GCA-GA--TA-T----AAC-CCCA--GCA--AATCATGA-----------AA-a--g--c-t--------a---tggggga---a---a-------a----a-----------------------a-g---gaag-taacaAA---CA----A-AGT-A-AA------A-AT-CC-----------------C-TGAT-AAAGA----------C----TA------------A-A--------------------A------A---------G--------T--C-TGGATGTca-gtc
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 20 C 0
s Ailurus_fulgens.LNAC01000003.1                          7094610 132 -  16596857 -------------------------caaatctgTAAGAGAACTAAAA-GC-C-T-------A-A--------GAA-GA--TA-G----AAC-CCCA--GTA--AATTATGG-----------AA-A--g--c-t--------t---tgggggg---a---g----g--g----a-----------------------a-g---gaag-taacaaa---ca----a-agt-a-aa------a-at-cc-----------------c-tgat-aaagc----------c----aa------------a-a--------------------a------a---------a--------a--t-tgGATGgca-gtc
i Ailurus_fulgens.LNAC01000003.1                        I 20 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   16828 147 -     22067 AAGGT-TTG-AAATCTTA-AAA-A-CAAATCTGGAAGGGAACT--AT-GC-CT--------A-G--------GCA-GA--TA-T----AACTG-CA--GTA--AATTATAA-----------A-AA--T--C-T--------A-G-------T---G---A-------A----A-----------------------A-G---TATG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------T-TGAA-AAGGC----------A----AA------------A-A--------------------A------A---------A--------A--T-TGGATAGCT-ATC
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   1291 151 -     60446 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GGA--AATTATGA-----------AA-A--G--C-T--------A---------A---A---A------AA----A---------------------TGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGAATGGCA-GTC
i Allenopithecus_nigroviridis.k141_2469532              C 0 I 1
s Allochrocebus_lhoesti.k141_3566948                         2010 151 -     29318 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GCA--AATTATGA-----------AA-A--G--C-T--------A---------A---A---A------AA----A---------------------TGA-G---AAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGAATGGCA-GTC
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                          945 151 +     38766 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GCA--AATTATGA-----------AA-A--G--C-T--------A---------A---A---A------AA----A---------------------TGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGAATGGCA-GTC
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          1904 151 -     80423 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GCA--AATTATGA-----------AA-A--G--C-T--------A---------A---A---A------AA----A---------------------TGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGAATGGCA-GTC
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            10211 147 -     18050 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAGGGAACC-AAA-GC-CC--------G-G--------GCA-GA--TA-C----AAC-CACA--GTA--AATTATGA-----------AA-C--G--C-T--------A---------A---A---A------AA----A---------------------CGA-G---G----TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAAC----------C----AA------------A-G--------------------A------T---------A--------T--T-TGGATGGCA-GTC
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                 11304 147 -     11521 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAGGGAACC-AAA-GC-CT--------G-G--------GCA-GA--TA-C----AAC-CACA--GTA--AATTATGA-----------AA-C--G--C-T--------A---------A---A---A------AA----A---------------------CGA-G---G----TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAAC----------C----AA------------A-G--------------------A------T---------A--------T--T-TGGATGGCA-GTC
i Alouatta_caraya.k141_5460                             C 0 C 0
s Alouatta_discolor.k141_811576                             10884 147 -     21359 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAGGGAACC-AAA-GC-CC--------G-G--------GCA-GA--TA-C----AAC-CACA--GTA--AATTATGA-----------AA-C--G--C-T--------A---------A---A---A------AA----A---------------------CGA-G---G----TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAAC----------C----AA------------A-G--------------------A------T---------A--------T--T-TGGATGGCA-GTC
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                 500 150 +      2129 AAAGG-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAGGGAACC-AAA-GC-CT--------G-G--------GCA-GA--TA-C----AAC-CACA--GTA--AATTATGA-----------AA-T--A--C-T--------A---------A---A---A------AA----A---------------------CGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAAC----------C----AA------------A-G--------------------A------T---------A--------T--T-TGGATGGTA-GTC
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                         10184  87 -     10438 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAGGGAACC-AAA-GC-CT--------G-G--------GCA-GA--TA-C----AAC-CACA--GTA--AATTATGA-----------AA-C--G--C-T--------A---------A---A---A------AA----A---------------------C--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Alouatta_macconnelli.k141_1331706                     C 0 I 60
s Alouatta_nigerrima.k141_2718643                            6842  87 +      7047 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAGGGAACC-AAA-GC-CT--------G-G--------GCA-GA--TA-C----AAC-CACA--GTA--AATTATGA-----------AA-C--G--C-T--------A---------A---A---A------AA----A---------------------C--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Alouatta_nigerrima.k141_2718643                       C 0 N 0
s Alouatta_palliata.k141_1316127                            10119 150 +     10410 AAACT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAGGGAACC-AAA-GC-CT--------G-G--------GCA-GA--TA-C----AAC-CACA--GTA--AATTATGA-----------AA-T--G--C-T--------A---------A---A---A------AA----A---------------------CGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAAC----------C----AA------------A-G--------------------A------T---------A--------T--T-TGGATGGCA-GTC
i Alouatta_palliata.k141_1316127                        C 0 I 7
s Alouatta_puruensis.k141_1284840                            3926 150 -      4927 AAAGG-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAGGGAACC-AAA-GC-CT--------G-G--------GCA-GA--TA-C----AAC-CACA--GTA--AATTATGA-----------AA-T--G--C-T--------A---------A---A---A------AA----A---------------------CGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAAC----------C----AA------------A-G--------------------A------T---------A--------T--T-TGGATGGCA-GTC
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_1531728                              65 150 -      1692 AAAGG-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAGGGAACC-AAA-GC-CT--------G-G--------GCA-GA--TA-C----AAC-CACA--GTA--AATTATGA-----------AA-T--A--C-T--------A---------A---A---A------AA----A---------------------CGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAAC----------C----AA------------A-G--------------------A------T---------A--------T--T-TGGATGGTA-GTC
i Alouatta_seniculus.k141_1531728                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3520063 134 +   4113121 -------------------------CAAATCTGTAAGGAAACTAAAA-GC-T---------GAG--------GCA-GA--TA-T----AAC-GGCA--GTA--CATTACTA-----------AA-A--G--C-T--------A-GGGG--GGG---A---A-------A----A-----------------------A-G---GAAG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CC-----------------C-AGAG-AAAGC----------C----AA------------A-A--------------------A------A---------A--------T--T-TGGAtggca-gtc
i Ammotragus_lervia.NIVO01013474.1                      I 20 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      390267 127 -    631301 -------------------------CAAATCTG-----GAACTAAAC-GC-C-T-------A-G--------ACA-GA--TA-G----AAC-CGCA--ATA--AATTATGA-----------AA-A--G--T-T--------A-----A--GGG--G---G-----A-A----A-----------------------A-G---GAAG-TGAAAAA---CA-ATAA-AGT-G-AA------A-AT-TC-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------A---------A--------T--T-TGGATGGCT-GTC
i Anoura_caudifer.AnoCau_scaffold_422                   I 20 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            30648 134 +     33004 -------------------------CAAATCTGTAAGGGAACTAAAA-GC-C---------AAG--------GCA-GA--TA-T----AAC-GGCA--GTA--CATTACGA-----------AA-A--G--C-T--------A-GGGGGA--A---A---A-------A----A-----------------------A-G---GAAG-TGGCAAA---CA-ATAA-AGT-A-AA------A-AT-CC-----------------C-AGAG-AAAGC----------C----AA------------A-A--------------------A------A---------A--------T--C-TGGATGGCA-GTC
i Antilocapra_americana.AntAmePen_scaffold_42841        I 20 C 0
s Aotus_azarae.k141_3170768                                 62567 151 +     78111 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------G-G--------GCA-GA--TA-T----AAC-CACA--GTA--AATTATGA-----------AA-T--G--C-T--------A---------A---A---A------AA----A---------------------CGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------G-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGGATGGCA-GTC
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            5509 151 +     22701 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------G-G--------GCA-GA--TA-T----AAC-CACA--GTA--AATTATGA-----------AA-T--G--C-T--------A---------A---A---A------AA----A---------------------TGA-G---GAGG-TGACAAA---CA-ATAA-AGG-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGGATGGCA-GTC
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5749466 151 +   9889416 a--aa-gtt-tgaagccttaaaaa-caaatctgtaaaGGAACCAAAA-GC-CT--------G-G--------GCA-GA--TA-T----AAC-CACA--GTA--AATTATGA-----------AA-T--G--C-T--------A---------A---A---A------AA----A---------------------CGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-Tgat-aaagc----------c----aa------------a-a--------------------a------t---------a--------t--t-tggATGGCA-Gtc
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             6054 151 -    104377 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------G-G--------GCA-GA--TA-T----AAC-CACA--GTA--AATTATGA-----------AA-T--G--C-T--------A---------A---A---A------AA----A---------------------CGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGGATGGCA-GTC
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               6056 151 +     23246 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------G-G--------GCA-GA--TA-T----AAC-CACA--GTA--AATTATGA-----------AA-T--G--C-T--------A---------A---A---A------AA----A---------------------CGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGGATGGCA-GTC
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     3642 150 +      5067 AAAGT-TTG-AATTCTTA-AAA-A-CAAATCTGTAAGGGAACTAAAA-AC-CT--------A-G--------ACA-GA--TA-T----AACTG-CA--ATA--AATTATGA-----------AGAGCCA--C-A--------A-G-------A---A---A-------A----A-----------------------A-G---GAAG-TGATAAA---C----AA-AAT-G-AA------A-AA-CT-----------------CTTGAT-AAAGC----------C----AA------------A-A--------------------A------A---------A--------A--T-TGAATGATA-GTC
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 I 3
s Arctocebus_calabarensis.k141_587554                         982 148 +      9265 AAAGT-TTG-AAGTCTTA-AAA-A-CAAATCTGTAAGGGAACCAAAT-GC-CT--------A-G--------GCA-TA--TA-T----AACT-GCA--GTA--AATTATGA-----------AA-A--T--C-T--------A---------G---A---A------AA----A-----------------------A-AAAAGACG-TGGCAAA---C----AA--AG-G-AA------T-AT-CT-----------------C-CAAT-AAAGC----------C----AA------------A-A--------------------A------A---------A--------T--T-TGGATGGCA-GTC
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 8675 128 -     29036 -------------------------CAAATCTG-----GAATGAAAA-GC-C-T-------A-G--------GCA-GA--TA-G----AACT-GCA--ATA--AATTATGA-----------AA-A--G--T-T--------A-GG------GG--G---G-----A-A----A-----------------------A-G---GAAG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-TC-----------------C-TGAT-AAAGC----------C----AA------------A-A-------------------GA------A---------A--------G--T-TGGATGGCA-GTC
i Artibeus_jamaicensis.ArtJam_scaffold_41619            I 20 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9539316 151 +  39197703 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAGGGAACCAAAA-GC-CT--------G-G--------GCA-GA--TA-T----AAC-CACA--GTA--AATTATGA-----------AA-T--G--C-T--------A---------A---A---A------AA----A---------------------CGA-G---GAGG-TGAGAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-G--------------------A------T---------A--------T--T-TGGATGGCA-GTC
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             60587 151 +     85812 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAGGGAACCAAAA-GC-CT--------G-G--------GCA-GA--TA-T----AAC-CACA--GTA--AATTATGA-----------AA-T--G--C-T--------A---------A---A---A------AA----A---------------------CGA-G---GAGG-TGAGAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-G--------------------A------T---------A--------T--T-TGGATGGCA-GTC
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                11600 151 +     89302 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAGGGAACCAAAA-GC-CT--------G-G--------GCA-GA--TA-T----AAC-CACA--GTA--AATTATGA-----------AA-T--G--C-T--------A---------A---A---A------AA----A---------------------CGA-G---GAGG-TGAGAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-G--------------------A------T---------A--------T--T-TGGATGGCA-GTC
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             16103 151 -     58268 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAGGGAACCAAAA-GC-CT--------G-G--------GCA-GA--TA-T----AAC-CACA--GTA--AATTATGA-----------AA-T--G--C-T--------A---------A---A---A------AA----A---------------------CGA-G---GAGG-TGAGAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-G--------------------A------T---------A--------T--T-TGGATGGCA-GTC
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             64095 151 +    119057 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAGGGAACCAAAA-GC-CT--------G-G--------GCA-GA--TA-T----AAC-CACA--GTA--AATTATGA-----------AA-T--G--C-T--------A---------A---A---A------AA----A---------------------CGA-G---GAGG-TGAGAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-G--------------------A------T---------A--------T--T-TGGATGGCA-GTC
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               6066 151 -     25888 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAGGGAACCAAAA-GC-CT--------G-G--------GCA-GA--TA-T----AAC-CACA--GTA--AATTATGA-----------AA-T--G--C-T--------A---------A---A---A------AA----A---------------------CGA-G---GAGG-TGAGAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-G--------------------A------T---------A--------T--T-TGGATGGCA-GTC
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 6713 150 -     16375 AAAGT-TTG-AAGTCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-TA--TA-T--AA--CT-GCA--GTA--AATGATGA-----------AA-A--T--C-T--------A---------G--AA---A------AA----A-----------------------A-A---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------A---------G--------T--T-TGGATGGCA-GTC
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                                332 150 +      6337 AAAGT-TTG-AAGTCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-TA--TA-T--AA--CT-GCA--GTA--AATGATGA-----------AA-A--T--C-T--------G---------G--AA---A------AA----A-----------------------A-A---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------A---------G--------T--T-TGGATGGCA-GTC
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26380147 132 +  51448160 -------------------------CAAATCTGTAAGGGAACTAAAA-GC-C---------TAG--------GCA-GA--TA-C----AAC-CACA--GTA--AATTATGA-----------AA-a--g--c-t--------a-----gggaa---a---a-------a----a-----------------------a-g---gaag-tgacAAA---CA-ATAA-AGT-G-AA------A-AT-CC-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------A---------A--------T--T-TGGATGACA-Gtc
i Balaenoptera_acutorostrata.KI537095.1                 I 20 C 0
s Balaenoptera_bonaerensis.DF502048.1                        5316 132 -     13118 -------------------------CAAATCTGTAAGGGAACTAAAA-GC-C---------TAG--------GCA-GA--TA-C----AAC-CACA--GTA--AATTATGA-----------AA-a--g--c-t--------a-----gggaa---a---a-------a----a-----------------------a-g---gaag-tgacAAA---CA-ATAA-AGT-G-AA------A-AT-CC-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------A---------A--------T--T-TGGATGACA-Gtc
i Balaenoptera_bonaerensis.DF502048.1                   I 20 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   43131 133 -     72089 -------------------------CAAATCTGTAAGGGAACTAAAA-GC-T---------GAG--------GCA-GA--TA-T----AAC-GGCA--GCA--CATTACTA-----------AA-A--G--C-T--------A-AGGGA---A---A---A-------A----A-----------------------A-G---AAAG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CC-----------------C-AGAG-AAAGC----------C----AA------------A-A--------------------A------A---------A--------T--T-TGGATGACA-GTC
i Beatragus_hunteri.BeaHun_scaffold_21644               I 20 C 0
s Bison_bison.KN264915.1                                  6559800 133 +   6870073 -------------------------CAAATCTGTAAGGGAACGAAAA-GC-C---------GAG--------GCA-GA--TA-T----AAC-GGCA--GTA--TATTACGA-----------AA-a--g--c-t--------a----ggggga---a---a-------a----a-----------------------a-g---gaag-tgaCAAA---CA-ATAA-AGT-G-AA------A-AT-CC-----------------C-AGAG-AAAGC----------C----AA------------A-A--------------------A------A---------A--------C--C-TGGAtggca-gtc
i Bison_bison.KN264915.1                                I 20 C 0
s Bos_indicus.CM003021.1                                138139908 134 - 161108492 -------------------------CAAATCTGTAAGGGAACGAAAA-GC-C---------GAG--------GCA-GA--TA-T----AAC-GGCA--GTA--TATTACGA-----------Aa-a--g--c-t--------a----ggggga--aa---a-------a----a-----------------------a-g---gaag-tgacAAA---CA-ATNA-AGT-G-AA------A-AT-CC-----------------C-AGAG-AAAGC----------C----AA------------A-A--------------------A------A---------A--------T--C-TGGAtggca-gtc
i Bos_indicus.CM003021.1                                I 20 C 0
s Bos_mutus.JH883513.1                                     572446 135 -    998990 -------------------------CAAATCTGTAAGGGAACGAAAA-GC-C---------GAG--------GCA-GA--TA-T----AAC-GGCA--GTA--TATTACGA-----------Aa-a--g--c-t--------a----ggggga--aaa--a-------a----a-----------------------a-g---gaag-tgacaAA---CA-ATAA-AGT-G-AA------A-AT-CC-----------------C-AGAG-AAAGC----------C----AA------------A-A--------------------A------A---------A--------T--C-TGGAtggca-gtc
i Bos_mutus.JH883513.1                                  I 20 C 0
s Bos_taurus.CM000177.6                                 136295641 134 - 158972876 -------------------------CAAATCTGTAAGGGAACGAAAA-GC-C---------GAG--------GCA-GA--TA-T----AAC-GGCA--GTA--TATTACGA-----------Aa-a--g--c-t--------a----ggggga--aa---a-------a----a-----------------------a-g---gaag-tgacAAA---CA-ATGA-AGT-G-AA------A-AT-CC-----------------C-AGAG-AAAGC----------C----AA------------A-A--------------------A------A---------A--------T--C-TGGAtggca-gtc
i Bos_taurus.CM000177.6                                 I 20 C 0
s Bubalus_bubalis.KI419065.1                              1232724 132 -   1914593 -------------------------CAAATCTGTAAGGGAACGAAAA-GC-C---------GAG--------GCA-GA--TA-T----AAC-GGCA--GTA--CATTACGA-----------AA-A--g--c-t--------a-----gggga---a---a-------a----a-----------------------a-g---gaag-tgaCAAA---CA-ATGA-AGT-G-AA------A-AT-CC-----------------C-AGAG-AAAGC----------C----AA------------A-A--------------------A------A---------A--------T--C-TGGATGGCA-gtc
i Bubalus_bubalis.KI419065.1                            I 20 C 0
s Cacajao_ayresi.k141_724503                               113949 151 -    171031 AAAGT-TTC-AAGCCTCA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-GT--------G-G--------GCA-GA--CA-T----AAC-CACA--GTA--AATTATGA-----------AA-T--G--C-T--------A---------A---A---A------AA----A---------------------CGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-C--------------------A------T---------A--------T--T-TGGATGGCA-GTC
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 12981 151 +    125063 AAAGT-TTC-AAGCCTCA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-GT--------G-G--------GCA-GA--CA-T----AAC-CACA--GTA--AATTATGA-----------AA-T--G--C-T--------A---------A---A---A------AA----A---------------------CGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGGATGGCA-GTC
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                15022 151 -    216513 AAAGT-TTC-AAGCCTCA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-GT--------G-G--------GCA-GA--CA-T----AAC-CACA--GTA--AATTATGA-----------AA-T--G--C-T--------A---------A---A---A------AA----A---------------------CGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGGATGGCA-GTC
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        7565 151 -    134917 AAAGT-TTC-AAGCCTCA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-GT--------G-G--------GCA-GA--CA-T----AAC-CACA--GTA--AATTATGA-----------AA-T--G--C-T--------A---------A---A---A------AA----A---------------------CGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGGATGGCA-GTC
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3219539 104 -   8989139 ---------------------------------------------------------------G--------GCA-GA--TA-T----AAC-CACA--GTA--AGTTATGa-----------aa-a--g--c-t--------a--ggggaaaa---a---a-------a----a-----------------------a-t---gaag-tgac-------a-ATAA-AGT-G-AA------A-AT-CC-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------A---------T--------T--T-TGGACGACA-GTc
i Camelus_bactrianus.KN276303.1                         I 40 C 0
s Camelus_dromedarius.KN271192.1                           397241 103 -  15254737 ---------------------------------------------------------------G--------GCA-GA--TA-T----AAC-CACA--GTA--AGTTATGa-----------aa-a--g--c-t--------a---gggaaaa---a---a-------a----a-----------------------a-t---gaag-tgac-------a-ATAA-AGT-G-AA------A-AT-CC-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------A---------T--------T--T-TGGACGACA-GTc
i Camelus_dromedarius.KN271192.1                        I 40 C 0
s Camelus_ferus.KB016973.1                                2972976 104 +   6889770 ---------------------------------------------------------------G--------GCA-GA--TA-T----AAC-CACA--GTA--AGTTATGa-----------aa-a--g--c-t--------a--ggggaaaa---a---a-------a----a-----------------------a-t---gaag-tgac-------a-ATAA-AGT-G-AA------A-AT-CC-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------A---------T--------T--T-TGGACGACA-Gtc
i Camelus_ferus.KB016973.1                              I 40 C 0
s CanFam4.chr31                                          11519425  85 +  39901454 -------------------------CAAATCTGTAAGAGAGCTAAAA-GC-C-T-------A-G--------GCA-GA--TA-T----AAC-CCCA--GCA--AATTATGA-----------AA-A--G--C-T--------A-TGGG--GGG---A---A-------A----A-----------------------A-G---GAAG-TAACAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------
i CanFam4.chr31                                         I 23 I 50
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   14450  85 +     87036 -------------------------CAAATCTGTAAGAGAGCTAAAA-GC-C-T-------A-G--------GCA-GA--TA-T----AAC-CCCA--GCA--AATTATGA-----------AA-A--G--C-T--------A-TGGG--GGG---A---A-------A----A-----------------------A-G---GAAG-TAACAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------
i Canis_lupus_VD.CanFam_VD_scaffold_16982               I 23 I 50
s Canis_lupus_dingo.QKWQ01001993.1                       11266092  85 -  35597290 -------------------------caaatctgtaaGAGAGCTAAAA-GC-C-T-------A-G--------GCA-GA--TA-T----AAC-CCCA--GCA--AATTATGA-----------AA-A--G--C-t--------a---tgggggg---a---a-------a----a-----------------------a-g---gaag-tAACAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------
i Canis_lupus_dingo.QKWQ01001993.1                      I 23 I 50
s Canis_lupus_familiaris.chr31                           11088626  85 +  39895921 -------------------------caaatctgtaaGAGAGCTAAAA-GC-C-T-------A-G--------GCA-GA--TA-T----AAC-CCCA--GCA--AATTATGA-----------AA-A--G--C-t--------a---tgggggg---a---a-------a----a-----------------------a-g---gaag-tAACAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------
i Canis_lupus_familiaris.chr31                          I 23 I 50
s Canis_lupus_orion.HG994411.1                           16455641  85 -  44759192 -------------------------caaatctgtaaGAGAGCTAAAA-GC-C-T-------A-G--------GCA-GA--TA-T----AAC-CCCA--GCA--AATTATGA-----------AA-A--G--C-t--------a---tgggggg---a---a-------a----a-----------------------a-g---gaag-taACAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------
i Canis_lupus_orion.HG994411.1                          I 23 I 50
s Capra_aegagrus.CM003214.1                              21325139 135 + 157394656 -------------------------CAAATCTGTAAGGAAACTAAAA-GC-T---------GAG--------GCA-GA--TA-T----AAC-GGCA--GTA--CATTACTA-----------AA-A--G--C-t--------a--ggaggagg---g---g-------a----a-----------------------a-g---gaag-tGACAAA---CA-ATAA-AGT-G-AA------A-AT-CC-----------------C-AGAG-AAAGC----------C----AA------------A-A--------------------A------A---------A--------T--T-TGGAtggca-gtc
i Capra_aegagrus.CM003214.1                             I 20 C 0
s Capra_hircus.CM004562.1                               135706366 135 - 157403528 -------------------------CAAATCTGTAAGGAAACTAAAA-GC-T---------GAG--------GCA-GA--TA-T----AAC-GGCA--GTA--CATTACTA-----------AA-A--G--C-t--------a--ggaggagg---g---g-------a----a-----------------------a-g---gaag-tGACAAA---CA-ATAA-AGT-G-AA------A-AT-CC-----------------C-AGAG-AAAGC----------C----AA------------A-A--------------------A------A---------A--------T--T-TGGAtggca-gtc
i Capra_hircus.CM004562.1                               I 20 C 0
s Carlito_syrichta.NW_007248099.1                          308992  81 +    345090 aaagt-tta-aagtcttaaAAA---CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GGA-GA--TA-T----AACT-GCA--GTA--Aattataa-----------aa-a--g--c-t--------a-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Carlito_syrichta.NW_007248099.1                       I 4 I 69
s Carollia_perspicillata.CarPer_scaffold_4436               59468 127 +     67245 -------------------------CAAATCTG-----GAACTAAAA-GC-C-T-------A-G--------GCA-GA--TA-G----AAC-CGCA--GTA--AATTATGA-----------AA-A--G--T-T--------A-GG------GG--G---G-----A-A----A-----------------------A-G---GAAG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-TC-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------A---------A--------G--T-TGGATGGCA-GTC
i Carollia_perspicillata.CarPer_scaffold_4436           I 20 C 0
s Castor_canadensis.CasCan_scaffold_47037                   30659 147 +     33760 AGGGT-TTG-AAATCTCA-AAA-A-CAAATCTGTAGGGGAACTA--A-GC-GT--------A-G--------GAA-GA--TA-G----CACTG-CA--GTA--AACTATGA-----------AA-A--G--C-T--------A-G-------A---A---A-------A----A-----------------------A-A---GAAG-TGACAAA---CA-ACAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------A---------T--------A--T-TGGATGGCA-GTC
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   158829 132 -    276539 -------------------------CAAATCTGCAAGGGAACTAAAA-GC-C---------TAG--------GCA-GA--TA-T----AAC-CGCA--GTA--AGTTATGA-----------AA-A--G--C-T--------A-GGG-A---A---A---A-------A----A-----------------------A-G---GAAG-TGGCAAA---CA-ATAA-AGT-G-AA------A-AA-TC-----------------C-CGAT-AAAGC----------C----AA------------A-A--------------------A------A---------A--------A--T-TGGATGGCA-GTC
i Catagonus_wagneri.CatWag_scaffold_1305                I 20 C 0
s Cavia_aperea.AVPZ01000278.1                            15786654  24 -  24422027 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NN----------N----NN------------N-N--------------------N------N---------N--------N--N-NNNNNNNNN-NNN
i Cavia_aperea.AVPZ01000278.1                           I 168 C 0
s Cavia_porcellus.DS562889.1                             15798463  76 -  24440124 aaaac-tgg-aagTCTTA-AAA-A-CAAATCTGTAAGGGAGCTAAAA-TT-CT--------A-A--------ACA-GA--TA-T----AAC---TAGAGTA--AATTATGA-----------TA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Cavia_porcellus.DS562889.1                            I 41 I 75
s Cavia_tschudii.CavTsc_scaffold_488                       176654  76 +    436027 AAAAC-TGG-AAGTCTTA-AAA-A-CAAATCTGTAAGGGAGCTAAAA-TT-CT--------A-A--------ACA-GA--TA-T----AAC---TAGAGTA--AATTATGA-----------TA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Cavia_tschudii.CavTsc_scaffold_488                    I 41 I 75
s Cebus_albifrons.Contig22                               18890798 151 -  29618158 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------G-G--------GCA-GA--TA-T----AAT-CACA--GTA--AATTATGA-----------AA-T--G--T-T--------A---------A---A---A------AA----A---------------------CGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGGATGGCA-GTC
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 8342 151 -     26817 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------G-G--------GCA-GA--TA-T----AAT-CACA--GTA--AATTATGA-----------AA-T--G--T-T--------A---------A---A---A------AA----A---------------------CGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGGATGGCA-GTC
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                12582 151 +     25043 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------G-G--------GCA-GA--TA-T----AAT-CACA--GTA--AATTATGA-----------AA-T--G--T-T--------A---------A---A---A------AA----A---------------------CGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGGATGGCA-GTC
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         8027 153 +     21754 AAAGT-TTA-AAGTCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GGA-GC--TA-T----AACT-GCA--GTA--AATTATAA-----------AA-A--G--C-T--------A-----A---A---A---A------AA----A---------------------AAATG---GAAG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-C--------------------A------T---------T--------T--T-TGGATGACA-GTC
i Cephalopachus_bancanus.k141_702587                    I 4 C 0
s Ceratotherium_simum.JH767818.1                          4363825 130 +   7569818 -------------------------caaatctgTAAGGGAATTAAAA-GC-C-T-------A-G--------GC--AG--TA-T----AACT-GTA--GTA--AATTAtga-----------aa-a--g--c-t--------a-------gga---aa--a-------a----a-----------------------a-t---gaag-tgacaAA---CA-ATAA-AGT-G-AA------A-GT-CC-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------A---------A--------T--T-TGGATGGCA-ATc
i Ceratotherium_simum.JH767818.1                        I 20 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         3582 130 -      9338 -------------------------CAAATCTGTAAGGGAATTAAAA-GC-C-T-------A-G--------GC--AG--TA-T----AACT-GTA--GTA--AATTATGA-----------AA-A--G--C-T--------A-GG------A---A--AA-------A----A-----------------------A-T---GAAG-TGACAAA---CA-ATAA-AGT-G-AA------A-GT-CC-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------A---------A--------T--T-TGGATGGCA-ATC
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    I 20 C 0
s Cercocebus_atys.KQ010443.1                              6555236 151 +   6739814 aaagt-ttg-aagcCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GCA--AATTATGA-----------AA-A--G--C-T--------A---------A---A---A------AA----A---------------------TGA-G---GTGG-TGACAAA---CA-ACAA-AGT-G-AA------A-AT-CT-----------------C-Tgat-aaagc----------c----aa------------a-a--------------------a------t---------a--------t--t-tgaatggca-gtc
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      26713 151 +     60454 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GCA--AATTATGA-----------AA-A--G--C-T--------A---------A---A---A------AA----A---------------------TGA-G---GAGG-TGACAAA---CA-ACAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGAATGGCA-GTC
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          1919 151 -     21101 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GCA--AATTATGA-----------AA-A--G--C-T--------A---------A---A---A------AA----A---------------------TGA-G---GTGG-TGACAAA---CA-ACAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGAATGGCA-GTC
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         59228 151 -    107033 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GCA--AATTATGA-----------AA-A--G--C-T--------A---------A---A---A------AA----A---------------------TGA-G---GTGG-TGACAAA---CA-ACAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGAATGGCA-GTC
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        2118 151 -     17608 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GCA--AATTATGA-----------AA-A--G--C-T--------A---------A---A---A------AA----A---------------------TGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGAATGGCA-GTC
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          29614 151 +     30494 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AACT-ACA--GCA--AATTATGA-----------AA-A--G--C-T--------A---------A---A---A------AA----A---------------------TGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--G-TGAATGGCA-GTC
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          58459 151 -     59240 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GCA--AATTATGA-----------AA-A--G--C-T--------A---------A---A---A------AA----A---------------------TGA-G---GAGG-TGACAAA---CA-ATAA-AAT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGAATGGCA-GTC
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          2160 151 +     16677 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GCA--AATTATGA-----------AA-A--G--C-T--------A---------A---A---A------AA----A---------------------TGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGAATGGCA-GTC
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           24319 151 +     35983 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GCA--AATTATGA-----------AA-A--G--C-T--------A---------A---A---A------AA----A---------------------TGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGAATGGCA-GTC
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11990846 151 +  12117833 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GCA--AATTATGA-----------AA-A--G--C-T--------A---------A---A---A------AA----A---------------------TGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGAATGGCA-GTC
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46477605 151 +  46592721 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGCAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GCA--AATTATGA-----------AA-A--G--C-T--------A---------A---A---A------AA----A---------------------TGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGT----------C----AA------------A-A--------------------A------T---------A--------T--T-TGAATGGCA-GTC
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      41156 151 -     45581 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GCA--AATTATGA-----------AA-A--G--C-T--------A---------A---A---A------AA----A---------------------TGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGAATGGCA-GTC
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       2161 151 +     35577 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GCA--AATTATGA-----------AA-A--G--C-T--------A---------A---A---A------AA----A---------------------TGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGAATGGCA-GTC
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        1937 151 -     25661 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GCA--AATTATGA-----------AA-A--G--C-T--------A---------A---A---A------AA----A---------------------TGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--G-TGAATGGCA-GTC
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        1916 151 -     17744 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GCA--AATTATGA-----------AA-A--G--C-T--------A---------A---A---A------AA----A---------------------TGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGAATGGCA-GTC
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        21532 150 +     37128 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA--C-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GCA--AATTATGA-----------AA-A--G--C-T--------A---------A---A---A------AA----A---------------------TGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGAATGGCA-GTC
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           2730  66 -      6963 -------------------------TAAATCTGTAAGGGAACTAAAA-GC-CT--------A-C--------A---GA--TA-T----AAC-AGCA--GTG--AATTATGA-----------AA-G--G--C-T--------A-G---A---G---A---A-------A----A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      I 25 I 45
s Cheirogaleus_major.k141_1157592                           58997 150 -     68416 AAAGT-TTG-AAGTCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-TA--TA-T--AA--CT-GCA--GTG--AATTATGA-----------AA-A--T--C-T--------A---------G--AA---A------AA----A-----------------------A-A---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------A---------G--------T--C-TAGATGGCA-GTC
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            8041 151 +     13308 AAAGT-TTG-AAGTCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-TA--TA-T--AA--CT-GCA--GTG--AATTATGA-----------AA-A--T--C-T--------A---------GG-AA---A------AA----A-----------------------A-A---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------A---------G--------T--C-TGGATGGCA-GTC
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             5609 150 -     18223 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAA--GC-CT--------G-G--------GCA-GA--TA-T----AAC-CACA--GTA--AATTATGA-----------AA-C--G--C-T--------A---------A---A---A------AA----A---------------------CGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------T-TGAT-AAAGC----------C----AA------------A-G--------------------A------T---------A--------T--T-TGGATGACA-GTC
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             22630 150 +     25473 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAA--GC-CT--------G-G--------GCA-GA--TA-T----AAC-CACA--GTA--AATTATGA-----------AA-C--G--C-T--------A---------A---A---A------AA----A---------------------TGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------T-TGAT-AAAGC----------C----AA------------A-G--------------------A------T---------A--------T--T-TGGATGACA-GTC
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           41667 150 +     57117 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAA--GC-CT--------G-G--------GCA-GA--TA-T----AAC-CACA--GTA--AATTATGA-----------AA-C--G--C-T--------A---------A---A---A------AA----A---------------------CGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------T-TGAT-AAAGC----------C----AA------------A-G--------------------A------T---------A--------T--T-TGGATGACA-GTC
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          46346 150 +     54541 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAA--GC-CT--------G-G--------GCA-GA--TA-T----AAC-CACA--GTA--AATTATGA-----------AA-C--G--C-T--------A---------A---A---A------AA----A---------------------CGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------T-TGAT-AAAGC----------C----AA------------A-G--------------------A------T---------A--------T--T-TGGATGACA-GTC
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15961673  83 +  43084221 AAAGT-T-----Gtgtcttaaaaa-caaatctgTAAGGGAGCTAAAA-TT-CT--------A-G--------GCA-AT--TA-T----AAC---TATAGTA--AATGatga-----------aaaa--t--g-a--------g--------gg---a-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Chinchilla_lanigera.JH721867.1                        I 73 I 65
s Chiropotes_israelita.k141_1189915                         71153 151 +    196370 AAAGT-TTC-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------G-G--------GCA-GA--TA-T----AAC-CACA--GTA--AATTATGA-----------AA-T--G--C-T--------A---------A---A---A------AA----A---------------------CGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGGATGGCA-GTC
i Chiropotes_israelita.k141_1189915                     C 0 I 2
s Chiropotes_sagulatus.k141_773804                          15333 151 +     40510 AAAGT-TTC-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------G-G--------GCA-GA--TA-T----AAC-CACA--GTA--AATTATGA-----------AA-T--G--C-T--------A---------A---A---A------AA----A---------------------CGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGGATGGCA-GTC
i Chiropotes_sagulatus.k141_773804                      C 0 I 2
s Chlorocebus_aethiops.ctg22                             15139051 151 -  15256731 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CC--------A-G--------GCA-GA--TA-T----AAC-CACA--GCA--AATTATGA-----------AA-A--G--C-T--------A---------A---A---A------AA----A---------------------CGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGAGTGGCA-GTC
i Chlorocebus_aethiops.ctg22                            I 23 C 0
s Chlorocebus_pygerythrus.k141_1486215                      34132 151 -     53260 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CC--------A-G--------GCA-GA--TA-T----AAC-CACA--GCA--AATTATGA-----------AA-A--G--C-T--------A---------A---A---A------AA----A---------------------TGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGAATGGCA-GTC
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101144692 151 + 101219884 aaagt-ttg-aagcCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GCA--AATTATGA-----------AA-A--G--C-T--------A---------A---A---A------AA----A---------------------TGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-Tgat-aaagc----------c----aa------------a-a--------------------a------t---------a--------t--t-tgaatggca-gtc
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_1707876              673   3 +       793 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------aac
i Chrysochloris_asiatica.ChrAsi_scaffold_1707876        N 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                16433  64 -     21363 -------------------------TAAATCTGTAAGGAAACTAAAA-GC-CT--------A-C--------ATG-GA--TA-T----AAC-AGCA--GTG--AATTATGA-----------GA-A--G--C-T--------A-----AA--T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Choloepus_didactylus.ChoDid_scaffold_36182            I 25 I 45
s Choloepus_hoffmanni.KN194586.1                           761741  64 +    964067 -------------------------taaatctgtaaGGAAACTAAAA-GC-CT--------A-C--------ATG-GA--TA-T----AAC-AGCA--GTG--AATTGTGA-----------GA-A--G--C-T--------A-----AA--T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Choloepus_hoffmanni.KN194586.1                        I 25 I 45
s Colobus_angolensis.KN985967.1                          10886461  81 +  10971483 aaagt-ttg-aagcCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GCA--AATTATGA-----------AA-A--G--C-T--------A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Colobus_angolensis.KN985967.1                         C 0 I 69
s Colobus_guereza.LG08                                  147664627  81 + 156195979 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GCA--AATTATGA-----------AA-A--G--C-T--------A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Colobus_guereza.LG08                                  C 0 I 69
s Colobus_polykomos.k141_1406057                            16612  81 +     23629 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GCA--AATTATGA-----------AA-A--G--C-T--------A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Colobus_polykomos.k141_1406057                        C 0 I 69
s Condylura_cristata.JH655880.1                          60613561 111 +  78930452 -------------------------aaaatctgtaaaggaATGAAAA-GTCT---------A-G--------GCA-AA--TA-A----AAC-CTCA--GTA--ATTTATGA-----------AA-G--A--C-C--------A-G---A---GG--A---C-------A----A-----------------------A-G---GAAG-TGAC-------A-ATGA-AGT-G-AAAACTGAA-AT-CC-----------------C-TGAT-AAAGT------------------------------------------------------------------------------------------------
i Condylura_cristata.JH655880.1                         I 27 I 21
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         39714  65 -     40477 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------A----G-----------------------T-G---GAAG-TGACAAA---CA-ATAA-AGT-A-AA------A-AT-CC-----------------C-TGGG-AAAGC----------C----AA------------A-AA-------------------C------G---------A--------A--T-TGGATGGCA-GTC
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     I 85 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 278496 106 -    399297 AAGGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGC-TCTCTGA-GT-CT--------A-G--------GCA-GA--TA-T----AACTG-CA--GTA--AATTAGAA-----------A-AA--T--C-A--------A-GG--AAAAA-ATA---A-------A----A-----------------------A-A---GAAG-TGACAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 I 54
s Cricetulus_griseus.LT883672.1                          53029174  86 +  72327488 a--ag-gtt-tgaagtcttaaaaa-caaatctgTAAAGACTCT--AA-GC-CT--------A-G--------GCA-GA--CA-T----AACGG-TA--GTA--AATTACAA-----------A-ac--t--c-a--------a---gaggaaa---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Cricetulus_griseus.LT883672.1                         C 0 I 65
s Crocidura_indochinensis.CroInd_scaffold_88140              2111 113 +     11655 -------------------------TAATTTTATAAAGAAAATAAAATAC-C---------A-T--------ACA-GA--TA-A----AGC-ATCA--GTA--AATTATGATTTATTTTTTTAA-A--T--G-T--------G-G------CA---A---A-------T-GACA-----------------------A-T---TAAA-TGAAAATCTTCA-AAAA-AGT-C-AA------A-AT--------------------------------------------------------------------------------------------------------------------------------
i Crocidura_indochinensis.CroInd_scaffold_88140         I 20 I 41
s Cryptoprocta_ferox.CryFer_flattened_line_19014            51966 129 -     70449 -------------------------CAAATCTGTAAGAGAACTAAAT-GC-C-T-------A-G--------GCA-GA--TA-T----AAC-CCCA--GTA--AATTATGA-----------AA-A--G--T-T--------A-TGG-----G---A---A-------A----A-----------------------A-G---GAAG-TAACAAA---CA----A-AGT-A-AA------A-AT-CC-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------AA--------T--------T--T-TGGATGGCA-GTC
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 20 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  208089  68 -    956709 AAAGT-TTG-AAGTCT-A-AAA-AGC--------CAGGGAACTGAAA-AC-CT--------C-C--------ACA-AA--TG-T----AAT---CA--CCA--AATTATGA-----------AAAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 I 69
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 30683 127 -     67205 -------------------------AAAACTTGTAAGGAAGA-AAAA-TT-CT--------A-G--------GCA-GT--TA-T----AAG---TATAATA--AAGTATGA-----------AAAG--T--CAG--------G-G-------G---A---A-----A-A----A-----------------------A-A---GAAA-GGATGAA---C-----A-AGT-G-AA------A-AT-CC-----------------C-TGAG-AAAGC----------C----AA------------A-G--------------------C------A---------C--------T--T-TTGAAGCCA-CTC
i Ctenomys_sociabilis.CteSoc_scaffold_19489             I 46 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                17704 152 +     26546 GAAGT-TGG-AAGTCTTA-AAA-A-CAAATTTGTAAAGGAGCTAAAA-TT-CT--------A-G--------GCA-GA--TA-T----GAC---TATAGTA--AATTATGA-----------AAAG--A-CT-G--------T-G-------A---A---A-----A-A----A-----------------------A-G---GAAG-AGACAAA---CA-ATCA-AGT-C-AC------T-AT-CC-----------------C-TGAG-AAAGC----------C----AA------------A-A--------------------C------A---------A--------T--T-TTGACTGCA-CTC
i Cuniculus_paca.CunPac_flattened_line_16637            I 31 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             58794 154 -    236241 AAAGT-TGG-GAGTCTTA-AAA-A-CAAATCTGTAAAAGTGCTAAAA-TT-TT--------A-G--------GCA-GA--TA-T----AAC---TATAGTG--AATTATGA-----------AAAG--C-CA-T--------T-G---AA--A---A---T-----A-A----A-----------------------A-G---GAAA-GGACAAA---CA-ATCA-ATT-G-GC------T-AT-CC-----------------T-TGAG-AAAGC----------C----GA------------A-A--------------------C------A---------A--------T--T-TTGACGGCA-CTC
i Dasyprocta_punctata.DasPun_flattened_line_634         I 30 C 0
s Dasypus_novemcinctus.JH568778.1                          183621  68 -   6883506 -------------------------caaatctATAAGGGAACTAAAA-GC-CT--------A-C--------ACA-GA--TA-T----AAC-AGTA--GTG--AATTATAA-----------AA-a--g--c-t--------a-------ggg---g---a-------a----a------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Dasypus_novemcinctus.JH568778.1                       I 25 I 37
s Daubentonia_madagascariensis.ctg11                     16844852 147 +  31942871 AAAGT-TTG-AAGTCTTA-AAA-A-CAAATTTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCG-TA--TA-T------CT-GCA--GTA--AATTATGA-----------AA-A--T--C-T--------A---------G---A---A------AA----A-----------------------A-G---GGGG-TGGCAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------A---------G--------T--T-TGGATGGCA-GTC
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80036770 132 -  96802777 -------------------------CAAATCTGTAAGGGAACTAAAA-GC-C---------TAG--------GCA-GA--TA-C----AAC-CACA--GTA--AATTATGA-----------AA-A--g--c-t--------a-----gggga---a---a-------a----a-----------------------a-g---gaag-tgaCAAA---CA-ATAA-AGT-G-AA------A-AT-CC-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------A---------A--------T--T-TGGATGACA-Gtc
i Delphinapterus_leucas.KZ290064.1                      I 20 C 0
s Desmodus_rotundus.KZ672188.1                           18698743 127 -  18957592 -------------------------CAAATCTG-----GAACTAAAA-GC-C-T-------A-G--------GCA-GA--TA-G----AACT-GCA--ATA--AATTATGA-----------AA-A--G--T-T--------A-GG------GG--G---A-----A-A----A-----------------------A-G---GAAG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-TC-----------------C-TGAT-AAAGC----------C----AG------------A-A--------------------A------A---------A--------A--T-TGGATGGCA-GTC
i Desmodus_rotundus.KZ672188.1                          I 20 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 322474 130 +    993696 -------------------------caaatctGTAAAGGAATTAAAA-GC-C-T-------A-G--------GC--AG--TA-T----AACT-GTA--GTA--AATTATGa-----------aa-a--g--c-t--------a-------gga---aa--a-------a----a-----------------------a-t---gaag-tgacaAA---CA-ATAA-AGT-G-AA------A-AT-CC-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------A---------A--------T--T-TGGATGGCA-ATc
i Dicerorhinus_sumatrensis.PEKH010003161.1              I 20 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   3127 130 +    151128 -------------------------CAAATCTGTAAGGGAATTAAAA-GC-C-T-------A-G--------GC--AG--TA-T----AACT-GTA--GTA--AATTATGA-----------AA-A--G--C-T--------A-GG------A---A--AA-------A----A-----------------------A-T---GAAG-TGACAAA---CA-ATAA-AGT-G-AA------A-GT-CC-----------------C-CGAT-AAAGC----------C----AA------------A-A--------------------A------A---------A--------T--T-TGGATGGCA-ATC
i Diceros_bicornis.DicBicMic_scaffold_9545              I 20 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   156943  85 +    228994 AATGT-TGG-AAGTCTTA-AAA-A-CAAATCTGTAAGGGAGCTAAAA-TT-CT--------A-A--------GCA-AA--TA-T----AAC---TACAGCA--AATTATGA-----------AAAG--T--G-A--------G-G-------G---G-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Dinomys_branickii.DinBra_scaffold_1996                I 32 I 63
s Dipodomys_ordii.KN672545.1                              3656264 149 +   4240102 AAGGT-TTG-AAGTCTTA-AAA-A-CAAATCTGAAGGAGAACTA--A-GC-GT--------A-G--------GCA-GA--TG-T----AACTG-CA--GTA--AATTAcgg-----------gaag--a--t-t--------a------aaaa---a---a-------a----a-----------------------a-g---ggag-tgacaaa----a-acaa-agt-g-aa------a-at-ct-----------------C-TGAT-GAAGC----------C----AA------------A-A--------------------A------A---------A--------C--T-TGGAAGGCA-GTC
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 27897 149 +     28912 AAGGT-TTG-AAGTCTTA-AAA-A-CAAATCTGAAGGAGAACTA--A-GC-GT--------A-G--------GCA-GA--TG-T----AACTG-CA--GTA--AATTACGG-----------GAAG--A--T-T--------A-----AAA-A---A---A-------A----A-----------------------A-G---GAAG-TGACAAA----A-ACAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-GAAGC----------C----AA------------A-A--------------------A------A---------A--------C--T-TGGAAGGCA-GTC
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                36045 155 -     73477 AAAAC-CTGGAAGTCTTA-AAA-A-CAAATCTGCAAGGGAGCTAAAA-TT-CT--------A-A--------ACA-CA--TA-T----AAC---TATAGTA--AATTATGA-----------AAAG--C-CA-G--------T-GGG-----GGGAA---A-----A-A----A-----------------------A-T---GAAA-GGACCAA---CA-ATCA-AGT-G-AC------T-AT-CC-----------------C-TGAG-AAAAC----------C----AA------------A-A--------------------C------A---------A--------T--T-TTGACAGCA----
i Dolichotis_patagonum.DolPat_scaffold_14102            I 31 C 0
s Echinops_telfairi.JH980316.1                           22998514  24 -  44670279 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------aa------t-at-ca-----------------a-taat-aaagt----------tttttta-------------------------------------------------------------------------------
i Echinops_telfairi.JH980316.1                          I 99 I 15
s Eidolon_helvum.KE772537.1                                 12230 105 +     24177 --------------------------------------------------------------------------------------------------------------------------------------------------------a---aagaaa------a----agaagggacaaacaataaagta--a-a---aatg-ggacaaa---aa-ataa-agt-a-aa------a-at-ct-----------------c-tgat-aaagc----------c----aa------------a-a-------------aaaaaaaaaaaaaaa---------c--------a--c-tggatgGCA-ATc
i Eidolon_helvum.KE772537.1                             I 73 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1491416  68 +   1727528 -------------------------CAAATCTGCAAGGGAACTAAAA-GC-C---------AAG--------GCA-GA--TA-T----AAC-AGCA--GTA--CATTACGA-----------AA-a--g--c-t--------a----ggggaa---a-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Elaphurus_davidianus.JRFZ01086400.1                   I 20 I 64
s Elephantulus_edwardii.JH947210.1                        7815885 143 +  15467074 -------------------------CAAGTACATAAGGTAACTA-----C-CT--------T-T--------GCA-TA--CA-T----AAC-CATA--ATA--CATTATGA-----------AT-G--G--C-T--------A---------A---A---A-------A----A-----------------------T-A---GAAA-GAGTAAA---AA-TTAC-CGT-A-AA------A-AT-TTCagtaaaatgcatttttt-aaag-gtagt----------g----aaaatga-aa--a-a-t--------------------a------a---------a--------c--c-tgCTTA-------
i Elephantulus_edwardii.JH947210.1                      I 20 C 0
s Ellobius_lutescens.LOEQ01003611.1                        239721  86 -    369425 aaggt-ttg-AAGTCATACAAA---CAAATGTGCAAAGACTCT--CA-GG-CT--------A-G--------GCA-GA--CC-A----AAGGG-TA--GTA--AACTACAG-----------a-gc--t--c-a--------a---ggggaaa---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Ellobius_lutescens.LOEQ01003611.1                     C 0 I 66
s Ellobius_talpinus.LOJH01090055.1                           6829  86 -      7838 aaggt-ttG-AAGTCGTACAAA---CAATTGTGCAAAGACTCT--CA-GG-CT--------A-G--------GCA-GA--CC-C----AAGTG-TA--GTA--AACTACAG-----------A-AC--T--C-A--------A-GGGGAA--A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Ellobius_talpinus.LOJH01090055.1                      C 0 I 65
s Enhydra_lutris.KZ291749.1                              85872133 130 +  99434291 -------------------------caaatctgtaAGAGAACTAAAA-GC-C-T-------A-G--------GAA-GA--TA-T----AAC-CCCA--GTA--AATTACGA-----------aa-a--g--c-t--------t---tggggga---a---aaaa----a----a-----------------------a-g---gaag-taac-------a----a-AGT-A-AA------A-AT-CC-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------A---------G--------T--T-TGGATGgca-gtc
i Enhydra_lutris.KZ291749.1                             I 20 C 0
s Eptesicus_fuscus.JH977687.1                             4704120 110 +   6522550 -------------------------caaatttg-----gaaCTAAAA-GC-C-T-------A-G--------GCA-GA--TA-G----AACT-Gca--ata--aattttga-----------aa-a--g--t-t--------a-------gaa---a---aa------g----a-----------------------a-g---gaag-tgacaaa--a-a-ataa-agt-g-aa------a-at-ct-----------------t-TCAT-AAAAC----------C----AA------------A-A--------------------A-------------------------------------------
i Eptesicus_fuscus.JH977687.1                           I 20 I 15
s Equus_asinus.JREZ01000062.1                             5852926 130 -   7175178 -------------------------CAAATTGGTAAGAGAACTAAAA-GC-T-T-------A-G--------GC--GG--TG-T----AAC-CGCA--GTA--AATTATGA-----------AA-a--g--c-t--------a-------gga---aa--a-------a----a-----------------------a-t---gaag-tgacaAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------A---------A--------T--T-TGGATGGCA-ATc
i Equus_asinus.JREZ01000062.1                           I 20 C 0
s Equus_caballus.CM000402.2                              13351429 131 +  41866177 -------------------------CAAATTGGTAAGAGAACTAAAA-GC-T-T-------A-G--------GC--GG--TG-T----AAC-CGCA--GTA--AATTATGA-----------Aa-a--g--c-t--------a-------gga---aa-aa-------a----a-----------------------a-t---gaag-tgacaaA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------A---------A--------T--T-TGGTTGGCA-ATc
i Equus_caballus.CM000402.2                             I 20 C 0
s Equus_przewalskii.ATBW01073585.1                          12919 130 +     92910 -------------------------CAAATTGGTAAGAGAACTAAAA-GC-T-T-------A-G--------GC--GG--TG-T----AACT-GCA--GTA--AATTATGA-----------AA-a--g--c-t--------a-------gga---aa--a-------a----a-----------------------a-t---gaag-tgacaAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------A---------A--------T--T-TGGATGGCA-ATc
i Equus_przewalskii.ATBW01073585.1                      I 20 C 0
s Erinaceus_europaeus.JH835290.1                         11534201  61 +  16010500 -------------------------caaaTCTGTAAATGAACTAAAA-GC-C---------TTG--------ACA-GA--TT-C----AGC-CTCA--Gta--aattataa-----------aa-a--g--t-t--------a-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Erinaceus_europaeus.JH835290.1                        I 21 I 66
s Erythrocebus_patas.Contig8                             48771257 151 -  48907691 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GCA--AATTATGA-----------AA-A--G--C-T--------A---------A---A---A------AA----A---------------------TGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGAATGGCA-GTC
i Erythrocebus_patas.Contig8                            I 43 I 2562
s Eschrichtius_robustus.EscRob_flattened_line_685          314986 132 +    330699 -------------------------CAAATCTGTACGGGAACTAAAA-GC-C---------TAG--------GCA-GA--TA-C----AAC-CACA--GTA--AAGTATGA-----------AA-A--G--C-T--------A-GGG-A---A---A---A-------A----A-----------------------A-G---GAAG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CC-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------A---------A--------T--T-TGGATGACA-GTC
i Eschrichtius_robustus.EscRob_flattened_line_685       I 20 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             61438 131 +     89355 -------------------------CAAATCTGTAAGGGAACTAAAA-GC-C---------TAG--------GCA-GA--TA-C----AAC-CACA--GTA---ATTATGA-----------AA-A--G--C-T--------A-GGG-A---A---A---A-------A----A-----------------------A-G---GAAG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CG-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------A---------A--------T--T-TGGATGACA-GTC
i Eubalaena_japonica.EubJap_flattened_line_7756         I 20 C 0
s Eulemur_albifrons.k141_715837                              5055  82 +     13586 AAAGT-TTG-AAGTCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-TA--TA-T--AA--CT-GCA--GTA--AATTATGA-----------AA-A--T--C-T--------A---------G---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Eulemur_albifrons.k141_715837                         C 0 I 67
s Eulemur_collaris.k141_311830                               4986  82 -      6809 AAAGT-TTG-AAGTCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-TA--TA-T--AA--CT-GCA--ATA--AATTATGA-----------AA-A--T--C-T--------A---------G---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Eulemur_collaris.k141_311830                          C 0 I 67
s Eulemur_coronatus.k141_3240342                            11463  82 +     36558 AAAGT-TTG-AAGTCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-TA--TA-T--AA--CT-GCA--GTA--AATTATGA-----------AA-A--T--C-T--------A---------G---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Eulemur_coronatus.k141_3240342                        C 0 I 67
s Eulemur_flavifrons.k141_903901                             7784  82 +     60246 AAAGT-TTG-AAGTCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-TA--TA-T--AA--CT-GCA--GTA--AATTATGA-----------AA-A--T--C-T--------A---------G---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Eulemur_flavifrons.k141_903901                        C 0 I 67
s Eulemur_fulvus.k141_653297                                11260  82 +    109717 AAAGT-TTG-AAGTCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-TA--TA-T--AA--CT-GCA--GTA--AATTATGA-----------AA-A--T--C-T--------A---------G---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Eulemur_fulvus.k141_653297                            C 0 I 67
s Eulemur_macaco.k141_1341545                               15646  82 +     16540 AAAGT-TTG-AAGTCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-TA--TA-T--AA--CT-GCA--GTA--AATTATGA-----------AA-A--T--C-T--------A---------G---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Eulemur_macaco.k141_1341545                           C 0 I 67
s Eulemur_mongoz.k141_825972                                15921  82 +     27497 AAAGT-TTG-AAGTCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-CC-CT--------A-G--------GCA-TA--TA-T--AA--CT-GCA--GTA--AATTATGA-----------AA-A--T--C-T--------A---------G---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Eulemur_mongoz.k141_825972                            C 0 I 67
s Eulemur_rubriventer.k141_411740                           18378  82 +     26808 AAAGT-TTG-AAGTCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-TT--------A-G--------GCA-TA--TA-T--AA--CT-GCA--GTA--AATTATGA-----------AA-A--T--C-T--------A---------G---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Eulemur_rubriventer.k141_411740                       C 0 I 67
s Eulemur_rufus.k141_1620292                                33116  82 +     46535 AAAGT-TTG-AAGTCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-TA--TA-T--AA--CT-GCA--GTA--AATTATGA-----------AA-A--T--C-T--------A---------G---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Eulemur_rufus.k141_1620292                            C 0 I 67
s Eulemur_sanfordi.k141_186399                              15840  82 -     29447 AAAGT-TTG-AAGTCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-TA--TA-T--AA--CT-GCA--GTA--AATTATGA-----------AA-A--T--C-T--------A---------G---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Eulemur_sanfordi.k141_186399                          C 0 I 67
s Felis_catus.CM001386.2                                129892891 128 - 159252932 -------------------------CAAATCTGTAAGAGAACTAAAT-GC-C-T-------A-G--------GAA-GA--TA-T----AAC-CCCA--GTA--AATTATGA-----------AA-A--G--C-T--------A-TGG-----A---A---A-------A----A-----------------------A-G---GAAG-TAACAAA---CA----A-AGT-A-AA------A-AT-CC-----------------C-Tgat-aaagc----------c----aa------------a-a--------------------a------a---------a--------a--t-tgGATGGCA-GTc
i Felis_catus.CM001386.2                                I 20 C 0
s Felis_catus_fca126.CM031420.1                         129279978 128 - 158578461 -------------------------caaatctgtaaGAGAACTAAAT-GC-C-T-------A-G--------GAA-GA--TA-T----AAC-CCCA--GTA--AATTATGA-----------AA-A--G--C-T--------A-TGG-----A---A---A-------A----A-----------------------A-G---GAAG-Taacaaa---ca----a-agt-a-aa------a-at-cc-----------------c-tgat-aaagc----------c----aa------------a-a--------------------a------a---------a--------a--t-tgGATGGCA-GTc
i Felis_catus_fca126.CM031420.1                         I 20 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 21123 128 +     52776 -------------------------CAAATCTGTAAGAGAACTAAAT-GC-C-T-------A-G--------GAA-GA--TA-T----AAC-CCCA--GTA--AATTATGA-----------AA-A--G--C-T--------A-TGG-----A---A---A-------A----A-----------------------A-G---GAAG-TAACAAA---CA----A-AGT-A-AA------A-AT-CC-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------A---------A--------A--T-TGGATGGCA-GTC
i Felis_nigripes.FelNig_flattened_line_8080             I 20 C 0
s Galago_moholi.ctg555                                     210880 149 -    847004 AAAGT-TTA-AAGTCTCA-AAA-A-CAAATCTGTAAGGGAACCAACT-GC-CT--------A-G--------GCA-TA--TA-T----AAC-CGCA--GTA--AATTATGA-----------AA-T--T--C-T--------A---------G---A---A------AA----A-----------------------A-G---AAGG-TGGCAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-CGAT-AAAGC----------C----AA------------A-G--------------------A------A---------T--------T--T-TGGATGGCA-TTC
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           13254 149 -     43889 AAAGT-TTA-AAGTCTCA-AAA-A-CAAATCTGTAAGGGAACCAACT-GC-CT--------A-G--------GCA-TA--TA-T----AAC-CGCA--GTA--AATTATGA-----------AA-T--T--C-T--------A---------G---A---A------AA----A-----------------------A-G---AAGG-TGGCAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-CGAT-AAAGC----------C----AA------------A-G--------------------A------A---------T--------T--T-TGGATGGCA-TTC
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          10326 149 +     27357 AAAGT-TTG-AAGTCTCA-AAA-A-CAAATCTGTAAGGGAACCAACT-GC-CT--------A-G--------GCA-TA--TA-T----AAC-CGCA--GTA--AATTATGA-----------AA-T--T--C-T--------A---------G---A---A------AA----A-----------------------A-G---GAGG-TGGCAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-CGAT-AAAGC----------C----AA------------A-A--------------------A------A---------T--------T--T-TGGATGGCA-GTC
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               156229 151 +    324696 AAAGA-TTG-AAGTCTTA-AAA-A-CAAATCTGTGAGGGAACTAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AACT-GTG--ATA--AATTATAA-----------AA-A--A--C-T--------A-G---A---A---A---A------AA----A-----------------------A-G---GAAA-TAACAAA---CA-ATAA-AGT-G-AA------A-AT-GA-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------A---------A--------T--G-TGGATGGCA-GTC
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    181216  69 -    189561 -------------------------CAAATCTGTAAGGGAACTAAAA-GC-C---------GAG--------GCA-GA--TA-T----AGC-GGCA--GCA--CGTTATGA-----------aa-a--g--c-t--------a---ggggaaa---a-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 20 I 61
s Glis_glis.GliGli_scaffold_79770                           13078  70 -     18683 ---------------------------------------------------------------------------------------------------CG--AATTATGA-----------AAAA--A--C-T--------A-G-------A---G---A-------A----G-----------------------A-G---GAAG-TGACAAA---CA-ATAA-AGT-A-AT------A-AT-CT-----------------C-TGAT-AAACC----------A----AA------------A-A--------------------A-------------------------------------------
i Glis_glis.GliGli_scaffold_79770                       I 52 I 12
s Gorilla_beringei.k141_111300                               5316 131 -     14630 A------------------------CAAATCTGTAAAGGAACCAAAA-GC-CC--------A-G--------GCA-GA--TA-T----AAC--ACA--GTA--AATTATGA-----------GA-G--G--C-T--------A---------A---A---A------AA----A---------------------TGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGAATGGCA-GTC
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119652415 131 - 195582420 a------------------------caaatctgTAAAGGAACCAAAA-GC-CC--------A-G--------GCA-GA--TA-T----AAC--ACA--GTA--AATTATGA-----------GA-G--G--C-T--------A---------A---A---A------AA----A---------------------TGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-Tgat-aaagc----------c----aa------------a-a--------------------a------t---------a--------t--t-tgaatggca-gtc
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   77566  52 +    118900 AAAGT-TTA-AAGTCTTA-AAA-G-CAAATCTGTAAGGGATCTAAAA-GC-TT--------A-A--------GCA-G-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 I 77
s Hapalemur_alaotrensis.k141_1280836                         1830  82 +     10286 AAAGT-TTG-AAGTCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-TA--TA-T--AA--CT-GCA--GTA--AATTATGA-----------AA-A--T--C-T--------A---------G---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Hapalemur_alaotrensis.k141_1280836                    C 0 I 67
s Hapalemur_gilberti.k141_279011                              307  82 -     11661 AAAGT-TTG-AAGTCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-TA--TA-T--AA--CT-GCA--GTA--AATTATGA-----------AA-A--T--C-T--------A---------G---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Hapalemur_gilberti.k141_279011                        C 0 I 67
s Hapalemur_griseus.k141_1387522                             5636  82 +     56096 AAAGT-TTG-AAGTCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-TA--TA-T--AA--CT-GCA--GTA--AATTATGA-----------AA-A--T--C-T--------A---------G---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Hapalemur_griseus.k141_1387522                        C 0 I 67
s Hapalemur_meridionalis.k141_186231                        28886  82 -     42470 AAAGT-TTG-AAGTCTTA-AAA-A-CAAATTTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-TA--TA-T--AA--CT-GCA--GTA--AATTATGA-----------AA-A--T--C-T--------A---------G---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Hapalemur_meridionalis.k141_186231                    C 0 I 67
s Hapalemur_occidentalis.k141_797938                        45509  82 -     54384 AAAGT-TTG-AAGTCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-TA--TA-T--AA--CT-GCA--GTA--AATTATGA-----------AA-A--T--C-T--------A---------G---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Hapalemur_occidentalis.k141_797938                    C 0 I 67
s Helogale_parvula.HelPar_flattened_line_22962              17173 129 +     53719 -------------------------CAAATCTGTAAGAGAACTAAAT-GT-C-T-------A-G--------GCA-GA--TA-T----AAC-CCCA--GTA--AATTATGA-----------AA-A--G--C-T--------A-TGG-----G---A---A-------A----A-----------------------A-G---AAAG-TAACAAA---CA----A-AGT-A-AA------A-AT-CC-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------AA--------A--------T--T-TGGATGGCA-GTC
i Helogale_parvula.HelPar_flattened_line_22962          I 20 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                27409 142 -     91191 -------------------------CAAATCTGTAAGGAAACTAAAA-GC-T-TCCTTTTAGAA--------GCA-GA--TA-T----AAC-AGCA--GTA--CATTCCTA-----------AA-A--G--C-T--------A-GGGGGA--A---A---A-------A----A-----------------------A-G---GAAG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CC-----------------C-AGAG-AAAGC----------C----AA------------A-A--------------------A------A---------A--------T--T-TGGATGCCA-GTC
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 20 C 0
s Heterocephalus_glaber.JH602058.1                        2551031 112 +  31725842 aaagt-ttg-aaGTCTT-T--------AATCTGTAAGGCAGCTAAAA-TT-CT--------A-G--------GCA-GC--TA-A----AAC---TACAGTA--AATTATGA-----------AATT--C--T-G--------g------aggg---c---aaaaaga-a----a-----------------------a-a---gaga-ttacaaa---ca-ataa-aat-----------------------------------------------------------------------------------------------------------------------------------------------
i Heterocephalus_glaber.JH602058.1                      C 0 I 40
s Heterohyrax_brucei.HetBruBak_scaffold_25354               60660  76 +     73687 ----------------------------------------------------------------------------------------------------------------------------------------------------------------A-------A----A-----------------------T-G---GAGG-GGACAAA---A--ATAA-AGT-G-AA------A-AT-CC-----------------C-CAAT-TTAAA----------A----GA--AGAAAAGAAAA-G--------------------A------A---------A--------ACAC-AGGATGATa-aaa
i Heterohyrax_brucei.HetBruBak_scaffold_25354           I 89 I 189
s Hippopotamus_amphibius.HipAmp_scaffold_1308              147063 133 +    277961 -------------------------CAAATCTGTAAGGGAACTAAAA-GC-C---------TAG--------GCA-GA--TA-T----AAC-CGCA--GTA--AATTATGA-----------AA-A--G--C-T--------A-GGG-A---A---A---A-------A----A-----------------------A-G---GAAG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CC-----------------C-TGAT-AAAGC----------C----AA------------A-AA-------------------A------A---------A--------A--T-TGGATGGCA-GTC
i Hippopotamus_amphibius.HipAmp_scaffold_1308           I 20 C 0
s Hipposideros_armiger.JXIK01001085.1                      278404  68 -    477199 ----------------------------------------------------------------------------------------------------------------------------------------------------------------A-----A-A----A-----------------------A-G---GAAG-TGGCAAA---CA-ATGA-AGT-G-AA------AAAT-CC-----------------C-TGAT-AAAGC----------C----AA------------A-AA-------------------C------A---------A--------A--T-TGGATGGCA-GTC
i Hipposideros_armiger.JXIK01001085.1                   I 79 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              7549  68 -      9143 ----------------------------------------------------------------------------------------------------------------------------------------------------------------A-----A-A----A-----------------------A-G---GAAG-TGGCAAA---CA-ATGA-AGT-G-AA------AAAT-TC-----------------C-TGAT-AAAGC----------C----AA------------A-AA-------------------C------A---------T--------A--T-TGGATGGCA-GTC
i Hipposideros_galeritus.HipGal_scaffold_104691         I 79 C 0
s Hoolock_leuconedys.ctg649                                   103745 131 +    115816 A------------------------CAAATCTGTAAAGGAACCAAAA-GC-CC--------A-G--------GCA-GA--TA-T----AAC--ACA--GTA--AATTATGA-----------AA-A--G--C-T--------A---------A---A---A------CA----A---------------------TGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-CT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGAATGGCA-GTC
i Hoolock_leuconedys.ctg649                                C 0 I 7
s Hyaena_hyaena.HyaHya_flattened_line_20729                 17243 129 -     67322 -------------------------CAAATCTGTAAGAGAACTAAAT-GC-C-T-------A-G--------GCA-GA--TA-T----AAC-CCCA--GTA--AATTATGA-----------AA-A--G--C-T--------A-TGG-----A---A---A-------A----A-----------------------A-G---GAAG-TAACAAA---CA----A-AGT-A-AA------A-AT-CC-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------AA--------C--------T--T-TGGATGGCA-GTC
i Hyaena_hyaena.HyaHya_flattened_line_20729             I 20 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           18908 160 -    119109 AAAGT-TGG-AAGTCTTA-AAA-A-CAAATCTGCAAGGGAGCTAAAA-TT-CT--------A-A--------ACA-GA--TA-T----AAC---TAGAGTA--AATTATGA-----------AAAG--C-CA-G--------T-GGGG--CGGGGTG---G-----G-G----A-----------------------A-G---GAAA-GGACAAA---CA-ATCA-AGT-G-AC------T-AT-CC-----------------C-TGAG-AAAAC----------C----AA------------A-A--------------------C------A---------A--------T--T-TTGACAGCA-CTC
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       I 31 C 0
s Hylobates_abbotti.k141_493872                              5146 132 +      5897 A------------------------CAAATCTGTAAAGGAACCAAAA-GC-CC--------A-G--------GCA-GA--TA-T----AAC--ACA--GTA--AATTATGA-----------AA-A--G--C-T--------A---------A---A---A------AA---TA---------------------TGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-CT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGAATGGCA-GTC
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_1878600                                41  96 -      1230 A------------------------CAAATCTGTAAAGGAACCAAAA-GC-CC--------A-G--------GCA-GA--TA-T----AAC--ACA--GTA--AATTATGA-----------AA-A--G--C-T--------A---------A---A---A------AA---TA---------------------TGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-----------------------------------------------------------------------------------------------------------------------------------
i Hylobates_agilis.k141_1878600                         N 0 I 34
s Hylobates_klossii.k141_285563                               191 132 +      1026 A------------------------CAAATCTGTAAAGGAACCAAAA-GC-CC--------A-G--------GCA-GA--TA-T----AAC--ACA--GTA--AATTATGA-----------AA-A--G--C-T--------A---------A---A---A------AA---TA---------------------TGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-CT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGAATGGCA-GTC
i Hylobates_klossii.k141_285563                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14624693 131 -  25970782 A------------------------CAAATCTGTAAAGGAACCAAAA-GC-CC--------A-G--------GCA-GA--TA-T----AAC--ACA--GTA--AATTATGA-----------AA-A--G--C-T--------A---------A---A---A------AA----A---------------------TGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-CT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGAATGGCA-GTC
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            1948 132 -      2977 A------------------------CAAATCTGTAAAGGAACCAAAA-GC-CC--------A-G--------GCA-GA--TA-T----AAC--ACA--GTA--AATTATGA-----------AA-A--G--C-T--------A---------A---A---A------AA---TA---------------------TGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-CT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGAATGGCA-GTC
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             33852 131 -     60944 A------------------------CAAACCTGTAAAGGAACCAAAA-GC-CC--------A-G--------GCA-GA--TA-T----AAC--ACA--GTA--AATTATGA-----------AA-A--G--C-T--------A---------A---A---A------AA----A---------------------TGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-CT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGAATGGCA-GTC
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     6089 155 +     22540 AAAGT-TTG-AAGTCTTA-AAA-A-CAAATCTGTACGGGAACTAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC---TGCGGTA--AATTATGA-----------AAAG--C--CAG--------G-G-------G---GAAAA-----A-A----A-----------------------A-G---AAAA-TGGCAAA---TA-GTAA-AGT-G-AA------A-AC-CC-----------------C-TGAG-AAAGC----------C----AA------------A-A--------------------C------A---------A--------C--T-TCAATAGCA-ATT
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7125794 152 +  13083262 aaagt-ttg-aAGTCTTA-AAA-A-CAAATCTGCAGG-GAACTAAAA-AC-CT--------A-G--------GCA-GA--TA-T----AACTG-CA--GTA--AATTATGA-----------AAAgcta--c-a--------a--------gg-gaa---aaa-----a----a-----------------------a-g---gaag-cgAT------CA-ACAA-AGT-G-AA------A-AT-CT-----------------C-AGAT-GAAGC----------C----AA------------A-A--------------------A------A---------T--------T--T-TGGATGGCA-gtc
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_5141390                                    346 151 -      3181 AAAGT-TTG-AAGTCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-TA--TA-T--AA--CT-GCA--GTA--AATGAAGA-----------AA-A--T--C-T--------A---------G-AAA---A------AA----A-----------------------A-A---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------A---------G--------T--T-TGGATGGCA-GTC
i Indri_indri.k141_5141390                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               8975 132 +     17520 -------------------------CAAATCTGTAAGGGAACTAAAA-GC-C---------TAG--------GCA-GA--TA-C----AAC-CACA--GTA--AATTATGA-----------AA-A--G--C-T--------A-GGGG----A---A---A-------A----A-----------------------A-G---GAAG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CC-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------A---------A--------T--T-TGGATGACA-GTC
i Inia_geoffrensis.IniGeo_flattened_line_66725          I 20 C 0
s Jaculus_jaculus.JH725517.1                              8565837 148 +  11848649 a--ag-gtt-tgaaatcttaaaaa-caaatctGGAAGGGAACT--AT-GC-CT--------A-G--------GAA-GA--TA-T----CACTG-CA--GTA--AATTATAA-----------A-AA--T--C-T--------A-G-------T---G---A-------A----A-----------------------A-G---TATG-TGACAAA---CA-ATAA-AGT-G-AA------A-at-ct-----------------t-tgaa-aaagc----------a----aa------------aaa--------------------a------a---------a--------a--t-tggatggct-atc
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               23591 128 +     37189 -------------------------CAAATCTGTAAGGGAACTAAAA-GC-C---------TAG--------GCA-GA--TA-C----AAC-CACA--GTA--AATTATGA-----------AA-A--G--C-T--------A-GGG-A---A---A---A-------A----A-----------------------A-G---GAAG-TGAC-------A-ATAA-AGT-G-AA------A-AT-CC-----------------C-TGGT-AAAGC----------C----AA------------A-A--------------------A------A---------A--------T--T-TGGATGACA-GTC
i Kogia_breviceps.KogBre_flattened_line_35920           I 20 C 0
s Lagothrix_lagothricha.k141_12968                          50185 151 -    147782 AAACT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAGGGAACCAAAA-GC-CT--------G-G--------GCA-GA--TA-T----AAC-CACA--GTA--AATTATGA-----------AA-T--G--C-T--------A---------A---A---A------AA----A---------------------CAA-G---GAGG-TGAGAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGGATGGCA-GTC
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   114207 109 -    115756 -------------------------GAATTTTG-----GAACTGAAA-GT-C-T-------C-G--------GCA-GA--TA-G----AACT-GCA--ATA--AATTTTGA-----------AA-A--G--T-T--------A-----A--GA---A---A-----A-A----A-----------------------A-G---AAAG-TGACAAA----A-ATAA-AGT-G-AA------A-AT-CT-----------------T-TCAT-AAAAC----------C----AA------------A-A--------------------A-------------------------------------------
i Lasiurus_borealis.LasBor_scaffold_5102                I 20 I 15
s Lemur_catta.scaffold_1                                258407192  82 - 285822530 AAAGT-TTG-AAGTCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-TA--TA-T--AA--CT-GCA--GTA--AATTATGA-----------AA-A--T--C-T--------A---------G---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Lemur_catta.scaffold_1                                C 0 I 67
s Lepilemur_ankaranensis.k141_884009                        23936  87 +     39228 AAAGT-TCG-AAGTCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-TA--TA-T--AA--CT-GCA--GTA--AATTATGA-----------AA-A--T--C-T--------A---------G-AAA---A------A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Lepilemur_ankaranensis.k141_884009                    C 0 I 62
s Lepilemur_dorsalis.k141_134267                            53320  87 +     63517 AAAGT-TCG-AAGTCTTA-AAA-A-CAAATCTGTAAAGGAACCAGAA-GC-CT--------A-G--------GCA-TA--TA-T--AA--CT-GCA--GTA--AATTATGA-----------AA-A--T--C-T--------A---------G-AAA---A------A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Lepilemur_dorsalis.k141_134267                        C 0 I 62
s Lepilemur_ruficaudatus.k141_617879                        78581  87 +    116806 AAAGT-TCA-AAGTCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-TA--TA-T--AA--CT-GCA--GTA--AATTATGA-----------AA-A--T--C-T--------A---------G-AAA---A------A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Lepilemur_ruficaudatus.k141_617879                    C 0 I 62
s Lepilemur_septentrionalis.k141_578524                     31575  87 -     33031 AAAGT-TCG-AAGTCTTA-AAA-A-CAAATCTGTAAAGGAACCAGAA-GC-CT--------A-G--------GCA-TA--TA-T--AA--CT-GCA--GTA--AATTATGA-----------AA-A--T--C-T--------A---------G-AAA---A------A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Lepilemur_septentrionalis.k141_578524                 C 0 I 62
s Leptonychotes_weddellii.KB714749.1                      3085937 130 -   3498232 -------------------------caaatctgtaagAGAACTAAAA-GC-C-T-------A-G--------GCA-GA--TA-T----AAC-CCCA--GTA--AATTATGA-----------AA-a--g--c-t--------a---tggggaa---a---aaa-----a----a-----------------------a-g---gaag-taac-------a----a-AGT-A-AAA-----A-AT-CC-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------A---------G--------T--T-TGGATggca-gtc
i Leptonychotes_weddellii.KB714749.1                    I 20 C 0
s Lepus_americanus.LepAme_scaffold_62849                    13199 150 +     22452 AAAGT-TTG-AAGTCTTA-AAA-A-CAAATCTGTAAAGGAACTAAAA-GC-CG--------A-G--------GCA-GA--TA-T----AAC-GGCA--ATA--AATTATGA-----------AA-A--G--C-T--------A-------CCA---G---A-------A----A-----------------------G-G---GAAG-CGACAAA---CA-TTAA-AGT-A-AA------A-AT-CC-----------------A-TGAT-AAAGC----------C----AA------------A-A--------------------A------A---------T--------A--T-TGGATGGTA-ATC
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            135931 132 +   3060487 -------------------------CAAATCTGTAAGGGAACTAAAA-GC-C---------TAG--------GCA-GA--TA-C----AACT-GCA--GTA--AATTATGA-----------AA-A--g--c-t--------a-----gggga---a---a-------a----a-----------------------a-g---gaag-tgacAAA---CA-ATAA-AGT-G-AA------A-AT-CC-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------A---------A--------T--T-TGGATGACA-Gtc
i Lipotes_vexillifer.KE558548.1                         I 20 C 0
s Lophocebus_aterrimus.ctg55                             19248330 151 +  19376315 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GCA--AATTATGA-----------AA-A--G--C-T--------A---------A---A---A------AA----A---------------------TGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGAATGGCA-GTC
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           10636  85 +     84689 AAAGT-TTG-AAGTCTTA-AAA-A-CAAATCTGTAAGGGAACCAAAT-GC-CT--------A-G--------GCA-TA--TA-T----AACT-GCA--GTA--AATTATGA-----------AA-A--T--C-T--------A---------G---A---A------A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Loris_lydekkerianus.k141_550999                       C 0 I 58
s Loris_tardigradus.ctg97                                 3778386  85 +   6799190 AAAGT-TTG-AAGTCTTA-AAA-A-CAAATCTGTAAGGGAACCAAAT-GC-CT--------A-G--------GCA-TA--TA-T----AACT-GCA--GTA--AATTATGA-----------AA-A--T--C-T--------A---------G---A---A------A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Loris_tardigradus.ctg97                               C 0 I 58
s Loxodonta_africana.GL010040.1                          20594186 142 -  62548349 -------------------------caaatcaGTAGGGTAGCTAAAT-GC-TT--------A-A--------GTA-GA--TA-T----AAC-AGTA--ATA--AATTATGA-----------AA-A--G--C-T--------A-G---A---A---A---A-------A----A-----------------------T-G---GAGA-Ggacaaa---ac-ataa-aat-g-aa------a-at-cc-----------------t-gaat-aaagt----------a----aaaacaacaaccaaa-a--------------------a------a---------a--------c--c-tggCTGGTA-att
i Loxodonta_africana.GL010040.1                         I 25 C 0
s Lycaon_pictus.CM007556.1                               11088082  85 +  39895028 -------------------------caaatctgtaaGAGAGCTAAAA-GC-C-T-------A-G--------GCA-GA--TA-T----AAC-CCCA--GCA--AATTATGA-----------AA-A--G--C-t--------a---tgggggg---a---a-------a----a-----------------------a-g---gaag-taACAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------
i Lycaon_pictus.CM007556.1                              I 23 I 50
s Macaca_arctoides.k141_2201161                             20066 151 +     74745 AAAGT-TTG-AAGCCTTA-AAA-A-CAAACCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GTG--AATTATGA-----------AA-A--G--C-T--------A---------A---A---A------AA----A---------------------TGA-G---AAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGAATGGCA-GTC
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12706522 151 +  12821369 AAAGT-TTG-AAGCCTTA-AAA-A-CAAACCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GTG--AATTATGA-----------AA-A--G--C-T--------A---------A---A---A------AA----A---------------------TGA-A---AAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGAATGGCA-GTC
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                2164 151 -      3136 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GTG--AATTATGA-----------AA-A--G--C-T--------A---------A---A---A------AA----A---------------------TGA-G---AAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGAATGGCA-GTC
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           46982 151 +     63263 GAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CGCA--GTG--AATTATGA-----------AA-A--G--C-T--------A---------A---A---A------AA----A---------------------TGA-G---AAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-GAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGAATGGCA-GTC
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                 1687 151 -      2568 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GTG--AATTATGA-----------AA-A--G--C-T--------A---------A---A---A------AA----A---------------------TGA-G---AAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-GAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGAATGGCA-GTC
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 2272 151 -      7381 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GTG--AATTATGA-----------AA-A--G--C-T--------A---------A---A---A------AA----A---------------------TGA-G---AAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGAATGGCA-GTC
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  45489 151 -     79256 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GTG--AATTATGA-----------AA-A--G--C-T--------A---------A---A---A------AA----A---------------------TGA-G---AAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGAATGGCA-GTC
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196035596 151 + 196197964 aaagt-ttg-aagcCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GTG--AATTATGA-----------AA-A--G--C-T--------A---------A---A---A------AA----A---------------------TGA-G---AAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-Tgat-aaagc----------c----aa------------a-a--------------------a------t---------a--------t--t-tgaatggca-gtc
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11445766 151 +  11645122 aaagt-ttg-aagcCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GTG--AATTATGA-----------AA-A--G--C-T--------A---------A---A---A------AA----A---------------------TGA-G---AAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-Tgat-aaagc----------c----aa------------a-a--------------------a------t---------a--------t--t-tgaatggca-gtc
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   4436 151 -     46448 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GTG--AATTATGA-----------AA-A--G--C-T--------A---------A---A---A------AA----A---------------------TGA-G---AAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGAATGGCA-GTC
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                2110 151 -     13212 AAAGT-TTG-AAGCCTTA-AAA-A-CAAACCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GTG--AATTATGA-----------AA-A--G--C-T--------A---------A---A---A------AA----A---------------------TGA-G---AAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGAATGGCA-GTC
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 15789 151 -     55006 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GTG--AATTATGA-----------AA-A--G--C-T--------A---------A---A---A------AA----A---------------------TGA-G---AAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGAATGGCA-GTC
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43840905 151 +  43892939 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GTG--AATTATGA-----------AA-A--G--C-T--------A---------A---A---A------AA----A---------------------TGA-G---AAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGAATGGCA-GTC
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               17075 151 -     24607 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GTG--AATTATGA-----------AA-A--G--C-T--------A---------A---A---A------AA----A---------------------TGA-G---AAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGAATGGCA-GTC
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               4441 151 -     27140 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GTG--AATTATGA-----------AA-A--G--C-T--------A---------A---A---A------AA----A---------------------TGA-G---AAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGAATGGCA-GTC
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                701597  78 +    802869 --------------------------------------------------------------------------------------------------------------------------------------------------------A---AAGAA-----A-A----A-----------------------A-A---GACG-TGATGAA---CA-ATAA-AGT-G-AA------G-AT-CT-----------------C-AGAT-AAAGC----------C----AA------------A-AAA-AAAA-A-----------A------A---------A--------T--C-TGGACGGCG-GTC
i Macroglossus_sobrinus.MacSob_scaffold_879             I 78 C 0
s Mandrillus_leucophaeus.scaffold125                     43437490 151 -  43563597 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GCA--AATTATGA-----------AA-A--G--C-T--------A---------A---A---A------AA----A---------------------TGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGAATGGCA-GTC
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4450310 151 -   4543643 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GCA--AATTATGA-----------AA-A--G--C-T--------A---------A---A---A------AA----A---------------------TGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGAATGGCA-GTC
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            145579 112 +    252755 -------------------------CAAATCTGTAAGGGAACTAAAA-GC-C-T-------A-G--------GCA-GA--TA-G----AAC-CACA--GTA--AATTATGA-----------AA-A--G--C-T--------A-GG------A---A---A-------A----A-----------------------G-G---GAAG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-AGAT-AAAGC----------C----AA------------A------------------------------------------------------------------
i Manis_javanica.JSZB01003966.1                         I 20 I 17
s Manis_pentadactyla.KN017078.1                             35656 112 +     58827 -------------------------CAAATCTGTAAGGGAACTAAAA-GC-C-T-------A-G--------GCA-GA--TA-G----AAC-CACA--GTA--AATTATGA-----------AA-A--G--C-T--------A-GG------A---A---A-------A----A-----------------------G-G---GAAG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-AGAT-AAAGC----------C----AA------------A------------------------------------------------------------------
i Manis_pentadactyla.KN017078.1                         I 20 I 17
s Marmota_marmota.CZRN01000005.1                         36873634 150 +  64221397 aaagt-ttg-aaGTCTTA-AAA-A-CAAATCTGTAGG-GAACTAAAA-AC-CT--------A-G--------GCA-GA--TA-T----AACTG-CA--GTA--AATTATGA-----------AAAgcta--c-a--------a--------gg---a---aaa-----a----a-----------------------a-g---gaag-cgAT------CA-ACAA-AGT-G-AA------A-AT-CT-----------------C-AGAT-AAAGC----------C----AA------------A-A--------------------A------A---------T--------T--T-TGGATGGCA-Gtc
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       64367 137 -    234502 -------------------------CAAATCTG-----GAACTAAAA-GC-C--C------A-A--------GCA-GA--TA-T----AACT-GCA--GCA--AATTAAGA-----------AA-A--A--T-T--------G-GGGGAAAAA---AAGAA-----A-A----A-----------------------A-G---GAAA-TGACAAA---CAAATCA-AGT-G-AA------G-AT-TT-----------------C-TGGT-AAAGC----------C----AA------------A-A--C-----------------C------A---------A--------A--T-TGTATGGAA-TTC
i Megaderma_lyra.MegLyr_scaffold_3562                   I 18 C 0
s Mellivora_capensis.MelCap_flattened_line_15433              941 132 -     87323 -------------------------CAAATCTGTAAGAGAACTAAAA-GC-C-T-------A-G--------AAA-GA--TA-T----AAC-CCCA--GTA--AATTATGA-----------AA-A--G--C-T--------T-TGGG--GGA---A---A-----A-A----A-----------------------A-G---GAAG-TAACAAA---CA----A-AGT-A-AA------A-AT-CC-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------A---------G--------T--T-TGGATGGCA-GTC
i Mellivora_capensis.MelCap_flattened_line_15433        I 20 C 0
s Mesocricetus_auratus.KB708139.1                         1046968  65 -  26018355 ----------------------------------------------------------------------------------------------------------------------------------------------------------------a-------a----a-----------------------a-g---gaaa-tgacaaa---CA-ATAA-AGT-G-AG------A-AT-CA-----------------C-TGAT-AAGTC----------C----AA------------A-A--------------------G------A---------A--------A--T-TGGATGGCA-GTc
i Mesocricetus_auratus.KB708139.1                       I 85 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               12668  86 +     15977 AAGGT-TTG-AAGTCTTA-AAA-A-CAAATCTATAAATGCTCT--AA-GC-CT--------A-G--------GCA-GT--TA-T----AACTG-CA--ATA--AATTACAA-----------A-AA--T--A-A--------A-GGGGAA--G---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Meriones_unguiculatus.MerUng_scaffold_52233           I 53 I 67
s Mesoplodon_bidens.MesBid_scaffold_227248                    265 132 -      1377 -------------------------CAAATCTGTAAGGGAACTAAAA-GC-C---------TAG--------GCA-GA--TC-C----AAC-CGCA--GTA--AATTATGA-----------AA-A--G--C-T--------A-GGGG----A---A---A-------A----A-----------------------A-G---GAAG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CC-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------A---------A--------T--T-TGGATGACA-GTC
i Mesoplodon_bidens.MesBid_scaffold_227248              I 20 C 0
s Microcebus_murinus.CM007691.1                          16510207 151 +  47401472 aaagt-ttg-aagtCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-TA--TA-T--AA--CT-TCA--GTA--AATTAtga-----------aa-a--t--c-t--------a---------g-gaa---a------aa----a-----------------------a-a---gagg-tgaCAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------A---------G--------T--C-TGGATGGCa-gtc
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  34453  37 -     48017 -------------------------TATATCACTAACGTTACAAGAC-AT-CT--------A-GAATATAAAT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Microgale_talazaci.MicTal_scaffold_34660              I 64 I 83
s Micronycteris_hirsuta.MicHir_scaffold_37978               22649 127 -     32043 -------------------------CAAATCTG-----GAACTAAAA-GC-C-T-------A-G--------GCA-GA--TA-G----AAC-CGCC--ATA--AATTATGA-----------AA-A--G--T-T--------A-GG------GG--G---G-----A-A----A-----------------------A-G---GAAG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-TC-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------A---------A--------A--T-TGGATGGCA-GTC
i Micronycteris_hirsuta.MicHir_scaffold_37978           I 20 I 2
s Miniopterus_natalensis.LDJU01000022.1                   8209703  68 +  10048721 ------------------------------------------------------------------------------------------------------------------------------------------------------------a---aa------a----a-----------------------t-g---GAAG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGat-aaagc----------c----aa------------a-a--------------------a------a---------a-------aa--t-tgGATGACA-GTC
i Miniopterus_natalensis.LDJU01000022.1                 I 78 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            34357  68 +     45743 ------------------------------------------------------------------------------------------------------------------------------------------------------------A---A-----A-A----A-----------------------T-G---GAAG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------A---------AA-------A--T-TGGATGACA-GTC
i Miniopterus_schreibersii.MinSch_scaffold_24116        I 78 C 0
s Microtus_ochrogaster.CM001673.1                        22820020  86 -  98408828 aaggt-ttg-AAGTCGTACAAA---CAAATCTGCAAAGACTCT--CA-GG-CT--------A-G--------GCA-GA--CC-C----AACTG-GA--GTA--AACTATAG-----------A-GC--T--C-A--------A-GGGGAA--A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Microtus_ochrogaster.CM001673.1                       C 0 I 65
s Miopithecus_ogouensis.k141_2935907                         2038 151 +     29742 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GCA--AATTATGA-----------AA-A--G--C-T--------A---------A---A---A------AA----A---------------------TGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGAATGGCA-GTC
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        11450 131 -    104932 -------------------------CAAATCTGTAAGAGAACTAAAA-GC-C-T-------A-G--------GCA-GA--TA-T----AAC-CCCA--GTA--AATTATGA-----------AA-A--G--C-T--------ATGGGGA---A---A---A---AAA-A----A-----------------------A-G---GAAG-TAAC-------A----A-AGT-A-AAA-----A-AT-CC-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------A---------G--------T--T-TGGATGGCA-GTC
i Mirounga_angustirostris.MirAng_flattened_line_8852    I 20 C 0
s Mirza_zaza.k141_226143                                     5596 150 +      8497 AAAGT-TTG-AAGTCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-TA--TA-T--AA--CT-TCA--GTA--AATTATGA-----------AA-A--T--C-T--------A---------G--AA---A------AA----A-----------------------A-A---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------A---------G--------T--C-TGGATGACA-GTC
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 146360 132 +    154973 -------------------------CAAATCTGTAAGGGAACTAAAA-GC-C---------TAG--------GCA-GA--TA-C----AAC-CACA--GTA--AATTATGA-----------AA-A--G--C-T--------A-GGGG----A---A---A-------A----A-----------------------A-G---GAAG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CC-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------A---------A--------T--T-TGGATGACA-GTC
i Monodon_monoceros.MonMon_M_scaffold_5598              I 20 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                161232  67 +    265003 ----------------------------------------------------------------------------------------------------------------------------------------------------------------A-----A-A----A-----------------------A-G---GAAG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-TC-----------------C-TGAT-AAAGC----------C----AA------------A-AA-------------------A------A---------A--------A--T-TGGATGGCA-ATC
i Mormoops_blainvillei.MorMeg_scaffold_2952             I 79 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  1440 133 -     19904 -------------------------CAAATCTGTAAG-GAACTAAAA-GC-C---------GAG--------GCA-GA--TA-T----AAC-GGCA--GTA--CATTACGA-----------AA-T--G--C-T--------A-GGGGAA--A---A---A-------A----A-----------------------A-G---GAAG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CC-----------------C-AGAG-GAAGC----------C----AA------------A-A--------------------A------A---------A--------T--T-TGGATGGCA-ATC
i Moschus_moschiferus.MosMos_scaffold_78805             I 20 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  144868 116 -    168139 -------------------------CAAATCTGTAAGAGAACTAAAT-GT-C-T-------A-G--------GCA-GA--TA-T----AAC-CCCA--GTA--AATTATGA-----------AA-A--G--C-T--------A-TGG-----G---A---A-------A----A-----------------------A-G---AAAG-TAACAAA---CA----A-AGT-A-AA------A-AT-CC-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------AA--------A--------T-----------------
i Mungos_mungo.MunMun_flattened_line_8729               I 20 I 12
s Murina_feae.MurFea_scaffold_2254                          19488 112 -    100666 -------------------------CAAATCTG-----GAACTAAAA-TC-C-T-------A-G--------GCA-GA--TA-G----AAAT-GCA--ATA--AATTTTGA-----------AA-A--G--T-T--------A-GGG-----G---A---A-----A-A----A-----------------------A-G---GAAG-TGACAAA---AA-ATAAAAGT-G-AA------A-AT-CT-----------------T-TCAT-AAAAC----------C----AA------------A-A--------------------A-------------------------------------------
i Murina_feae.MurFea_scaffold_2254                      I 20 I 15
s Mus_caroli.LT608236.1                                  70766519  83 +  92629107 a--ag-gtt-tcaagtcttaaaaa-caaatctgTAAAGGCCTT--AA-GC-CT--------A-G--------GGA-GA--TA-T----AACTT-Ca--gta--aattacaa-----------a-aa--t--a-a--------a------ttaa---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Mus_caroli.LT608236.1                                 C 0 I 64
s Mus_musculus.chr16                                     75489579  83 +  98207768 aaggttTTA-A-GTCTTA-AAA-A-CAAATCTGTAAAGGCCCT--AA-GC-CT--------A-G--------GGA-GA--TA-T----AACTT-Ca--gta--aattacaa-----------a-aa--t--a-a--------a------taaa---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Mus_musculus.chr16                                    I 1 I 64
s Mus_pahari.LT608305.1                                  67555810  83 +  89017189 aaggt-TTA-CAGCCTTA-AAA-A-CAGATCTGTAAAGGCTCT--AA-GC-CT--------A-G--------GGA-GA--TA-T----AActt-ta--gta--aattaaaa-----------a-aa--t--a-a--------a------gcaa---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Mus_pahari.LT608305.1                                 C 0 I 66
s Mus_spretus.CM004110.1                                 74330755  83 +  97876770 a--at-gtt-ttaagtcttaaaaa-caaatctgTAAAGGCCTT--AA-AC-CT--------A-G--------GGA-GA--TA-T----AACTT-Ca--gta--aattacaa-----------a-aa--t--a-a--------a------taaa---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Mus_spretus.CM004110.1                                C 0 I 64
s Muscardinus_avellanarius.MusAve_scaffold_9643             11845  72 +     98495 ---------------------------------------------------------------------------------------------------TA--AATTATGA-----------AAAA--AATC-T--------A-G-------A---T---A-------A----A-----------------------A-T---GAAG-TTACGAA---CA-ATAA-AGT-G-AT------A-AT-TT-----------------T-TGAT-AAAGC----------A----AA------------A-A--------------------A-------------------------------------------
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 52 I 12
s Mustela_putorius.JH417978.1                             4424311 128 -  28371801 -------------------------caaatctgTAAGAGAACTAAAA-GC-C-T-------A-G--------GAA-GA--TA-T----AAC-CCCA--GTA--AATTATGA-----------aa-a--g--c-t--------t---tggggga---a---aa------a----a-----------------------a-g---gaag-taac-------a----A-AGT-A-AA------A-AT-CC-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------A---------G--------T--T-TGGATGGca-gtc
i Mustela_putorius.JH417978.1                           I 20 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     89959  81 -    117718 -------------------------CAAATCTGTAAGGAAGC-AAAA-TT-CT--------A-G--------GCA-GT--CA-T----AGT---AACGGTA--AAGTATAA-----------AAAA--C--A-G--------G-G-------G---G---A-----A-A----A-----------------------G-G---GAAG-AGCAAAC-------------------------------------------------------------------------------------------------------------------------------------------------------------
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 46 I 44
s Myotis_brandtii.KE161952.1                               967799 110 +   8389877 -------------------------CAAATCTG-----GAACTAAAA-GC-C-T-------A-G--------GCA-GA--TA-G----AAAT-gca--ata--aattttga-----------aa-a--g--t-t--------a-------gaa---a---aa------a----a-----------------------a-g---gaaa-tgacaaa---aa-ataa-agt-a-aa------a-at-ct-----------------t-CCAT-TAAAC----------C----AA------------A-A--------------------A-------------------------------------------
i Myotis_brandtii.KE161952.1                            I 20 I 15
s Myotis_davidii.KB114863.1                               5019476 110 +   6462685 -------------------------CAAATCTG-----GAACTAAAA-GC-C-T-------A-G--------GCA-GA--TA-G----AAAT-gca--ata--aattttga-----------aa-a--g--t-t--------a-------gaa---a---aa------a----a-----------------------a-g---gaaa-tgacaaa---aa-ataa-agt-a-aa------a-at-ct-----------------t-CCAT-TAAAC----------C----AA------------A-A--------------------A-------------------------------------------
i Myotis_davidii.KB114863.1                             I 20 I 15
s Myotis_lucifugus.GL429887.1                             3465381 110 -   3747815 -------------------------CAAATCTG-----GAACTAAAA-GC-C-T-------A-G--------GCA-GA--TA-G----AAAT-gca--ata--aattttga-----------aa-a--g--t-t--------a-------gaa---a---aa------a----a-----------------------a-g---gaaa-tgacaaa---aa-atat-agt-a-aa------a-at-ct-----------------T-CCAT-AAAAC----------C----AA------------A-A--------------------A-------------------------------------------
i Myotis_lucifugus.GL429887.1                           I 20 I 15
s Myotis_myotis.MyoMyo_scaffold_6123                        10594 110 +     66751 -------------------------CAAATCTG-----GAACTAAAA-GC-C-T-------A-G--------GCA-GA--TA-G----AAAT-GCA--ATA--AATTTTGA-----------AA-A--G--T-T--------A-G---A---A---A---A-----A-A----A-----------------------A-G---GAAA-TGACAAA---AA-ATAA-AGT-A-AA------A-AT-CT-----------------T-CCAT-TAAAC----------C----AA------------A-A--------------------A-------------------------------------------
i Myotis_myotis.MyoMyo_scaffold_6123                    I 20 I 15
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             5001  67 -      8794 -------------------------CAAATCTGTAAGGAAA-TACAA-GC-CA--------A-C--------ACA-GA--TA-T----AAC-AGCA--GTG--AATTATCA-----------GA-A--G--G-A--------G-G------TG---A---C-------A----A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        I 25 I 49
s Nannospalax_galili.KL201303.1                            118626 148 +    362372 aagtt-tta-aagtcTTA-AAA-A-CAAATCTGCAAAGGAAT--GAA-GC-CT--------A-A--------GCA-GA--CA-G----AACTG-CA--CTA--AATTACCA-----------A-AA--T--G-C--------A-G-------A---A---A-------A----A-----------------------A-G---GAAG-TGGCAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------T-TGATTAAAGC----------C----AA------------G-A--------------------G------A---------A--------T--T-TGGATGGCA-GTC
i Nannospalax_galili.KL201303.1                         I 44 C 0
s Nasalis_larvatus.k141_153429                               8546  81 +     48152 aaagt-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GCA--AATTATGA-----------AA-A--A--C-T--------A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Nasalis_larvatus.k141_153429                          C 0 I 69
s Neomonachus_schauinslandi.NINY01007774.1                4484842 131 -  14209539 -------------------------caaatctgtaagAGAACTAAAA-GC-C-T-------A-G--------GCA-GA---A-T----AAC-CCCA--GTA--AATTATGA-----------AA-A--g--c-t--------a---tggggaa---a---aaa--ga-a----a-----------------------a-g---gaag-taac-------a----A-AGT-A-AAA-----A-AT-CC-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------A---------G--------T--T-TGGATggca-gtc
i Neomonachus_schauinslandi.NINY01007774.1              I 20 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3950972 132 -   4490290 -------------------------CAAATCTGTAAGGGAACTAAAA-GC-C---------TAG--------GCA-GA--TA-C----AAC-CACA--GTA--AATTATGA-----------AA-A--g--c-t--------a-----gggga---a---a-------a----a-----------------------a-g---gaag-tgacAAA---CA-ATAA-AGT-G-AA------A-AT-CC-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------A---------A--------T--T-TGGATGACA-Gtc
i Neophocaena_asiaeorientalis.KZ688543.1                I 20 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  49268  62 +     94413 -------------------------CAAATCTG-----GAACTAAAA-GC-C-T-------A-G--------GCA-GA--TA-G----AACT-GCA--ATA--AATTATGA-----------AA-A--G--T-T--------A-GG------G--AA---A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Noctilio_leporinus.NocLep_scaffold_12062              I 20 I 56
s Nomascus_annamensis.k141_220265                             458 132 +      1763 A------------------------CAAATCTGTAAAGGAACCAAAA-GC-CC--------T-G--------GCA-GA--TA-T----AAC--ACA--GTA--AATTATGA-----------AA-A--G--C-T--------A---------A---A---A------AA----A--------------------ATGA-G---GAGA-TGACAAA---CA-ATAA-AGT-G-AA------A-CT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGAATGGCA-GTC
i Nomascus_annamensis.k141_220265                       I 141 I 7
s Nomascus_concolor.k141_226614                              1251 131 -      5092 A------------------------CAAATCTGTAAAGGAACCAAAA-GC-CC--------A-G--------GCA-GA--TA-T----AAC--ACA--GTA--AATTATGA-----------AA-A--G--C-T--------A---------A---A---A------AA----A---------------------TGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-CT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGAATGGCA-GTC
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_642452                            2034 131 +      2851 A------------------------CAAATCTGTAAAGGAACCAAAA-GC-CC--------A-G--------GCA-GA--TA-T----AAC--ACA--GTA--AATTATGA-----------AA-A--G--C-T--------A---------A---A---A------AA----A---------------------TGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-CT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGAATGGCA-GTC
i Nomascus_gabriellae.k141_642452                       I 196 I 7
s Nomascus_siki_b.tarseq_80                             24969 131 -  18771707 A------------------------CAAATCTGTAAAGGAACCAAAA-GC-CC--------A-G--------GCA-GA--TA-T----AAC--ACA--GTA--AATTATGA-----------AA-A--G--C-T--------A---------A---A---A------AA----A---------------------TGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-CT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGAATGGCA-GTC
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  2672 131 +      4512 A------------------------CAAATCTGTAAAGGAACCAAAA-GC-CC--------A-G--------GCA-GA--TA-T----AAC--ACA--GTA--AATTATGA-----------AA-A--G--C-T--------A---------A---A---A------AA----A---------------------TGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-CT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGAATGGCA-GTC
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                30883  85 +   3668941 -------------------------caaatctgtaaGAGAGTTAAAA-GC-C-T-------A-G--------GCA-GA--TA-T----AAC-CCCA--GCA--AATTATGA-----------AA-A--G--C-t--------a---tgggggg---a---a-------a----a-----------------------a-g---gaag-taACAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------
i Nyctereutes_procyonoides.CAJHUB010000786.1            I 23 I 50
s Nycticebus_bengalensis.LG16                            65567074  88 -  95554990 AAAGT-TCG-AAGTCTTA-AAA-A-CAAATCTGTAACGGAACCAAAT-GC-CT--------A-G--------GCA-TA--TA-T----AACT-GCA--GTA--AATTATGA-----------AA-A--T--C-T--------A---------G---AAAGA------A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Nycticebus_bengalensis.LG16                           C 0 I 58
s Nycticebus_coucang.k141_2051882                            3800  88 +      6470 AAAGT-TCG-AAGTCTTA-AAA-A-CAAATCTGTAACGGAACCAAAT-GC-CT--------A-G--------GCA-TA--TA-T----AACT-GCA--GTA--AATTATGA-----------AA-A--T--C-T--------A---------G---AAAGA------A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Nycticebus_coucang.k141_2051882                       C 0 I 58
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65669412  85 +  89412551 AAAGT-TTG-AAGTCTTA-AAA-A-CAAATCTGTAACGGAACCAAAT-GC-CT--------A-G--------GCA-TA--TA-T----AACT-GCA--GTA--AATTATGA-----------AA-A--T--C-T--------A---------G---A---A------A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 I 58
s Ochotona_princeps.JH802095.1                            4995947 150 -  23139505 a--aa-gtt-tgaaatcttaaaaa-caaatctgtaaagGAACTAAAA-GC-CC--------A-G--------GCA-GA--TG-C----AAT-GGCA--ATA--AATTATGA-----------AA-A--G--C-T--------A-G---A---A---G---A-------A----A-----------------------G-G---GAAG-CGACAAA---CA-TTAA-CGT-G-AA------A-AT-CC-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------A---------T--------A--T-TGGATGGCA-ATc
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3685515 126 +  10294119 -------------------------CAAATCTGTAAGGAAAC-AAAA-TT-CT--------A-A--------GCA-GT--TA-T----AAC---TATAATA--AAGTATGA-----------AAAG--C--C-g--------g--------gt---a---aa------a----a-----------------------a-g---gaaa-ggaaaag---a-----a-agt-g-aa------a-at-cc-----------------C-TGAG-AAGGC----------C----AA------------A-G--------------------C------A---------A--------T--T-TTGAAGGCA-CTC
i Octodon_degus.JH651621.1                              I 46 C 0
s Odobenus_rosmarus.KB229369.1                             679505 135 -   3126709 -------------------------caaatctgTAAGAAAACTAAAA-GC-C-T-------A-G--------GCA-GA--TA-T----AAC-CCTA--GTA--AATTATGA-----------AA-a--g--c-t--------a---tggggga---a---aaaa----a----a-----------------------a-g---gaag-taacaaa---ca----a-agt-a-ag-----aa-aT-CC-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------A---------G--------T--T-TGGATggca-gtc
i Odobenus_rosmarus.KB229369.1                          I 20 C 0
s Odocoileus_virginianus.KZ101650.1                       1079647 133 +   1425656 -------------------------CAAATCTGTACGGGAACTAAAA-GC-C---------GAG--------GCA-GA--TA-T----AAC-GGCA--GTA--CATTACGA-----------aa-a--g--c-t--------a----ggggaa---a---a-------a----a-----------------------a-g---gaag-tgacAAA---CA-ATAA-AGT-G-AA------A-AT-CC-----------------C-AGAG-AAAGC----------C----AA------------A-A--------------------A------A---------A--------T--T-TGGAtggca-gtc
i Odocoileus_virginianus.KZ101650.1                     I 20 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         36944  72 +     78940 -------------------------CAAATCTGTAAGGGAACTAAAA-GC-C---------GAG--------GCA-GA--TA-T----AGC-GGCA--GTA--TATACTGA-----------Aa-a--g--c-t--------a---gaggaaa---a---a-------a----a------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Okapia_johnstoni.LVCL01S0017931.1                     I 20 I 61
s Ondatra_zibethicus.OndZib_scaffold_6821                  125273  86 +    145789 AAGGT-TTG-AAGTCGTACAAA---CAAATCTGCAAAGACGCC--AA-GG-CT--------A-G--------TTA-GA--TC-C----AACTG-TA--GTA--AACTACAG-----------A-AC--T--C-A--------C-GGG-AAA-A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 I 66
s Onychomys_torridus.OnyTor_scaffold_12578                  37073  84 +     62360 AAGGT-TTG-AAGTCTTA-AAA-A-CAAATCTGTAAGGGCTCT--AA-GC-CC--------A-G--------GCA-GA--TA-T----AACTG-TA--GTA--AATTAAAA-----------A-AC--T--C-A--------A-GGG-A---A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 I 65
s Orcinus_orca.KB316965.1                                 7224657 132 -   7562323 -------------------------CAAATCTGTAAGGGAACTAAAA-GC-C---------TAG--------GCA-GA--TA-C----AAC-CGCA--GTA--AATTATGA-----------AA-A--g--c-t--------a-----gggga---a---a-------a----a-----------------------a-g---gaag-tgaCAAA---CA-ATAA-AGT-G-AA------A-AT-CC-----------------C-Tgat-aaagc----------c----aa------------a-a--------------------a------a---------a--------a--t-tgGATGACA-Gtc
i Orcinus_orca.KB316965.1                               I 20 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              57523  79 -     66828 ---------------------------------------------------------------------------------------------GTA--ATA--AAATATCA-----------AA-A--G--G-T--------A-G------TA---A---A-------A----A-----------------------T-G---GAGA-GGACAGA---AA-TGAA-AGT-G-AA------A-AT-CT-----------------C-TAAT-AAAGT----------T----AA---------AAAA-A--------------------A------A---------A--------------------------
i Orycteropus_afer.OryAfe_flattened_line_13509          I 52 I 10
s Oryctolagus_cuniculus.CM000803.1                      141876233 150 + 163896628 a--aa-gtt-tgaagtcttaaaaa-caaatctGTAAAGGAACTAAAA-GC-CG--------A-G--------GCA-GA--TA-T----AAC-Ggca--ata--aattatga-----------aa-a--a--c-t--------a-------gCA---G---A-------A----A-----------------------G-G---GAAG-CGACAAA---CA-TTAA-AGT-G-AA------A-AT-CC-----------------A-TGAT-AAAGC----------C----AA------------A-A--------------------A------A---------T--------A--T-TGGATGGTA-ATC
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      308169  68 -    505867 -------------------------caaatctgtaaGAGAGCTAAAA-GC-C-T-------A-G--------GCA-GA--TA-T----AAC-CCCA--GCA--AATTATGA-----------AA-A--G--C-T--------A-TGGG--GGG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Otocyon_megalotis.JAEUCK010005121.1                   I 23 I 66
s Otolemur_crassicaudatus.k141_505435                         693 149 -     53940 AAAGT-TTG-AAGTCTCA-AAA-A-CAAATCTGTAAGGGAACCAACT-GC-CT--------A-G--------ACA-TA--TA-T----AAC-CACA--GTA--AATTATGA-----------AA-T--T--C-T--------A---------G---A---A------AA----A-----------------------A-G---GAGG-TGGCAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------A---------T--------T--T-TGGATGGCA-TTC
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18008673 149 -  38779656 a--aa-gtt-tgaagtctcaaaaa-caaatctgTAAGGGAACCAACT-GC-CT--------A-G--------GCA-TA--TA-T----AAC-CGCA--GTa--aattatga-----------aa-t--t--c-t--------a---------g---a---a------aa----a-----------------------a-g---gAGG-TGGCAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------G---------T--------T--T-TGGATGGCA-ttc
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134077280  66 - 275406953 ------------------------------------------------------------------------------------------------------------------------------------------------------------a---a-------a----a-----------------------a-g---gaag-agacaaa---CA-ATAA-AGT-G-AA------A-AT-CC-----------------C-AGAG-AAAGC----------C----AA------------A-A--------------------A------A---------A--------T--T-TGGAtggca-gtc
i Ovis_aries.CM001582.2                                 I 95 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      78419 142 +    140051 -------------------------CAAATCTGTAAGGAAACTAAAA-GC-T-TCCTTTTAGAA--------GCA-GA--TA-T----AAC-GGCA--GTA--CATTCCTA-----------AA-A--G--C-T--------A-GGGG--GGA---A---A-------A----A-----------------------A-G---GAAG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CC-----------------C-AGAG-AAAGC----------C----AA------------A-A--------------------A------A---------A--------T--T-TGGATGCCA-GTC
i Ovis_canadensis.OviCan_scaffold_6251                  I 20 C 0
s Pan_paniscus.CM003386.1                               127574682 131 - 205426864 a------------------------caaatctgTAAATGAACCAAAA-GC-CC--------A-G--------GCA-GA--TA-T----AAC--ACA--GTA--AATTATGA-----------GA-G--G--C-T--------A---------A---A---A------AA----A---------------------TGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-Tgat-aaagc----------c----aa------------a-a--------------------a------t---------a--------t--t-tgaatggca-gtc
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120151836 131 - 196562556 a------------------------caaatctgTAAATGAACCAAAA-GC-CC--------A-G--------GCA-GA--TA-T----AAC--ACA--GTA--AATTATGA-----------GA-G--G--C-T--------A---------A---A---A------AA----A---------------------TGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-Tgat-aaagc----------c----aa------------a-a--------------------a------t---------a--------t--t-tgaatggca-gtc
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  34284 128 +    295523 -------------------------CAAATCTGTAAGAGAACTAAAT-GC-C-T-------A-G--------GAA-GA--TA-T----AAC-CCCA--GTA--AATTATGA-----------AA-A--G--C-T--------A-TGG-----A---A---A-------A----A-----------------------A-G---GAAG-TAACAAA---CA----A-AGT-A-AA------A-AT-CC-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------G---------A--------A--T-TGGATGGCA-GTC
i Panthera_onca.PanOnc_flattened_line_1615              I 20 C 0
s Panthera_pardus.KV860323.1                              3638018 128 +  18214204 -------------------------caaatctgtaaGAGAACTAAAT-GC-C-T-------A-G--------GAA-GA--TA-T----AAC-CCCA--GTA--AATTATGA-----------AA-A--G--C-T--------A-TGG-----A---A---A-------A----A-----------------------A-G---GAAG-Taacaaa---ca----a-agt-a-aa------a-at-cc-----------------c-tgat-aaagc----------c----aa------------a-a--------------------a------a---------a--------a--t-tggATGGCA-Gtc
i Panthera_pardus.KV860323.1                            I 20 C 0
s Panthera_tigris.KE721879.1                              5027693 128 -   6340057 -------------------------caaatctgtaaGAGAACTAAAT-GC-C-T-------A-G--------GAA-GA--TA-T----AAC-CCCA--GTA--AATTATGA-----------AA-A--G--C-T--------A-TGG-----A---A---A-------A----A-----------------------A-G---GAAG-TAACAAA---CA----A-AGT-A-AA------A-AT-CC-----------------C-Tgat-aaagc----------c----aa------------a-a--------------------a------a---------a--------a--t-tgGATGGCA-Gtc
i Panthera_tigris.KE721879.1                            I 20 C 0
s Pantholops_hodgsonii.KE114631.1                         1066133  64 -   1292953 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------A----A-----------------------A-G---GAAG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CC-----------------C-AGAG-AAAGC----------C----AA------------A-A--------------------A------A---------T--------T--T-TGGATGgca-gtc
i Pantholops_hodgsonii.KE114631.1                       I 88 C 0
s Papio_anubis.CM001492.2                               188156277 151 - 188283584 aaagt-ttg-aagcCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GCA--AATTATGA-----------AA-A--G--C-T--------A---------A---A---A------AA----A---------------------TGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-Tgat-aaagc----------c----aa------------a-a--------------------a------t---------a--------t--t-tgaatggca-gtc
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             4594 151 +      5367 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GCA--AATTATGA-----------AA-A--G--C-T--------A---------A---A---A------AA----A---------------------TGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGAATGGCA-GTC
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47513662 151 +  47705337 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-TA--TA-T----AAC-CACA--GCA--AATTATGA-----------AA-A--G--C-T--------A---------A---A---A------AA----A---------------------TGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGAATGGCA-GTC
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 67638 151 -    104429 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GCA--AATTATGA-----------AA-A--G--C-T--------A---------A---A---A------AA----A---------------------TGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGAATGGCA-GTC
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    6174 151 +     14967 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GCA--AATTATGA-----------AA-A--G--C-T--------A---------A---A---A------AA----A---------------------TGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGAATGGCA-GTC
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 2033 151 -      7628 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GCA--AATTATGA-----------AA-A--G--C-T--------A---------A---A---A------AA----A---------------------TGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGAATGGCA-GTC
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    115745 129 -    135482 -------------------------CAAATCTGTAAGAGAACTAAAT-GC-C-T-------A-G--------GCA-GA--TA-T----AAC-CCCG--GTA--AATTATGA-----------AA-A--G--C-T--------A-TGG-----A---A---A-------A----A-----------------------A-G---GAAG-TAACAAA---CA----A-AGT-A-AA------A-AT-CC-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------AA--------A--------T--T-TGGATGGCA-GTC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 I 20 C 0
s Perodicticus_ibeanus.k141_117958                           5385 148 -     23713 AAAGT-TTG-AAGTCTTA-AAA-A-CAAATCTGTAAGGGAACCAAAT-GC-CT--------A-C--------ACG-TA--TA-T----AACT-GCA--GTA--AATTATGA-----------AA-A--T--C-T--------A---------G---G---G------AA----A-----------------------A-AAAAGAGG-TGGCAAA---C----AA--AG-G-AA------A-AT-CT-----------------C-CCAT-AAAGC----------C----AA------------A-A--------------------A------A---------T--------T--T-TGGATGGCA-GTC
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            24697 149 -     27972 AAAGT-TTG-AAGTCTTA-AAA-A-CAAATCTGTAAGGGAACCAAAT-GC-CT--------A-C--------GCG-TA--TA-T----AACT-GCA--GTA--AATTATGA-----------AA-A--T--C-T--------A---------G---A---A------AA-G--A-----------------------A-AAAAGAGG-TGGCAAA---C----AA--AG-G-AA------A-AT-CT-----------------C-CCAT-AAAGC----------C----AA------------A-A--------------------A------A---------T--------T--T-TGGATGGCA-GTC
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      44520 157 -     45160 AAGGT-TTG-AAGTCTTA-AAA-A-CAAATCTGTAGGAGAACTC--A-GT-GT--------A-G--------GCA-GA--TG-T----AACTG-CA--GTA--AATTACGG-----------GAAG--A--T-ACAAAAAGAA-----AAA-G---A---A-------A----A-----------------------A-G---GAAG-TGACAAA----A-ACAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-GAAGC----------C----AA------------A-A--------------------G------A---------A--------C--T-TGGAAGGCA-GTC
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4950310  86 -   8017169 a--ag-gtt-tgaagtcttaaaaa-caaatctgTAAGGGCTCT--AA-GC-CC--------A-G--------GCA-GA--TA-T----AACTG-TA--GTA--AATTACAA-----------a-ac--t--c-a--------a---ggggaaa---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Peromyscus_maniculatus.KI615518.1                     C 0 I 65
s Petromus_typicus.PetTyp_scaffold_33007                    12407 113 -     36578 AAAGT-TTA-AAGTCTTATAAACA---AACCTGTAAGGGAACTAAAA-TT-CT--------A-G--------GCG-GA--TA-T----AAT---TGCAGTA--AATTATGA-----------AATG--C--T-G--------G-AGG-----G---A---A-----A-A----C-----------------------A-A---GATA-TGACAAA---TA-ATAT-AGT-----------------------------------------------------------------------------------------------------------------------------------------------
i Petromus_typicus.PetTyp_scaffold_33007                C 0 I 14
s Phocoena_phocoena.PhoPho_flattened_line_11948            121262 132 -    122454 -------------------------CAAATCTGTAAGGGAACTAAAA-GC-C---------TAG--------GCA-GA--TA-C----AAC-CACA--GTA--AATTATGA-----------AA-A--G--C-T--------A-GGGG----A---A---A-------A----A-----------------------A-G---GAAG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CC-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------A---------A--------T--T-TGGATGACA-GTC
i Phocoena_phocoena.PhoPho_flattened_line_11948         I 20 C 0
s Piliocolobus_badius.k141_1987485                           2061  81 -      5908 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GCA--AATTATGA-----------AA-A--G--C-T--------A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Piliocolobus_badius.k141_1987485                      C 0 I 69
s Piliocolobus_gordonorum.k141_1270531                       2685  81 -     17985 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GCA--AATTATGA-----------AA-A--G--C-T--------A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Piliocolobus_gordonorum.k141_1270531                  C 0 I 69
s Piliocolobus_kirkii.k141_929665                            2052  81 +      7694 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GCA--AATTATGA-----------AA-A--G--C-T--------A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Piliocolobus_kirkii.k141_929665                       C 0 I 69
s Piliocolobus_tephrosceles.PDMG02000036.1               26740530  81 +  26888534 aaagt-ttg-aagcCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GCA--AATTATGA-----------AA-A--G--C-T--------A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 I 69
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            97426  78 +    112873 -------------------------CAAATTTG-----GAACTAAAA-AC-C-T-------A-G--------GCAAGA--TA-G----AACT-GCA--ATA--AATTTTGA-----------AA-A--G--T-T--------A-G---A---A---A---A-----A-G----A-----------------------A-G---GAAG-TGTCAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        I 22 I 37
s Pithecia_albicans.k141_991845                             43791 152 -     61926 AAAGT-TTC-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------G-G--------GCA-GA--TA-T----AAC-CACA--GTA--AATTATGA-----------AA-T--G--C-T--------A---------A---A---A------AA----A---------------------CGA-G---GAGG-TGACAAA---CA-ATAA-AGT-GAAA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGGATGGCA-GTC
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        25176 152 +     78826 AAAGT-TTC-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------G-G--------GCA-GA--TA-T----AAC-CACA--GTA--AATTATGA-----------AA-T--G--C-T--------A---------A---A---A------AA----A---------------------CGA-G---GAGG-TGACAAA---CA-ATAA-AGT-GAAA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGGATGGCA-GTC
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              9223 152 -     15800 AAAGT-TTC-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------G-G--------GCA-GA--TA-T----AAC-CACA--GTA--AATTATGA-----------AA-T--G--C-T--------A---------A---A---A------AA----A---------------------CGA-G---GAGG-TGACAAA---CA-ATAA-AGT-GAAA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGGATGGCA-GTC
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        12422 152 -     16101 AAAGT-TTC-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------G-G--------GCA-GA--TA-T----AAC-CACA--GTA--AATTATGA-----------AA-T--G--C-T--------A---------A---A---A------AA----A---------------------CGA-G---GAGG-TGACAAA---CA-ATAA-AGT-GAAA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGGATGGCA-GTC
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          5650 152 +      9673 AAAGT-TTC-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------G-G--------GCA-GA--TA-T----AAC-CACA--GTA--AATTATGA-----------AA-T--G--C-T--------A---------A---A---A------AA----A---------------------CGA-G---GAGG-TGACAAA---CA-ATAA-AGT-GAAA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGGATGGCA-GTC
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13474650 152 -  19735023 AAAGT-TTC-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------G-G--------GCA-GA--TA-T----AAC-CACA--GTA--AATTATGA-----------AA-T--G--C-T--------A---------A---A---A------AA----A---------------------CGA-G---GAGG-TGACAAA---CA-ATAA-AGT-GAAA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGGATGGCA-GTC
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           13553 152 -     31692 AAAGT-TTC-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------G-G--------GCA-GA--TA-T----AAC-CACA--GTA--AATTATGA-----------AA-T--G--C-T--------A---------A---A---A------AA----A---------------------CGA-G---GAGG-TGACAAA---CA-ATAA-AGT-GAAA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGGATGGCA-GTC
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           5349 131 +     21690 -------------------------CAAATCTGTAAGGGAACTAAAA-GC-C---------TAG--------GCA-GA--TA-C----AAC-CGCA--GTA--AATTATGA-----------AA-A--G--C-T--------A-GGG-----A---A---A-------A----A-----------------------A-G---GAAG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CC-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------A---------A--------T--C-TGGATGACA-GTC
i Platanista_gangetica.PlaMin_flattened_line_72990      I 20 C 0
s Plecturocebus_bernhardi.k141_959214                       22893 151 +     44506 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------G-G--------GCA-GA--TA-T----AAC-CACA--GTA--AATTATGA-----------AA-T--G--C-T--------A---------A---A---A------AA----A---------------------CGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-G--------------------A------T---------A--------T--T-TGGATGGCA-GTC
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        23105 151 +     67491 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------G-G--------GCA-GA--TA-T----AAC-CACA--GTA--AATTATGA-----------AA-T--G--C-T--------A---------A---A---A------AA----A---------------------CGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-G--------------------A------T---------A--------T--T-TGGATGGCA-GTC
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      13345 151 -     98129 AAAGT-TTG-AAG-CTT-TAAAAA-CAAATCTGTAAAGGAACCAAAA-GC-CT--------G-G--------GCA-GA--TA-T----AAC-CACA--GTA--AATTATGA-----------AA-T--G--C-T--------A---------A---A---A------AA----A---------------------CGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-G--------------------A------T---------A--------T--T-TGGATGGCA-GTC
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     22945 151 +    147771 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------G-G--------GCA-GA--TA-T----AAC-CACA--GTA--AATTATGA-----------AA-T--G--C-T--------A---------A---A---A------AA----A---------------------CGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-G--------------------A------T---------A--------T--T-TGGATGGCA-GTC
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        23200 151 -     23762 AAAGT-TTG-AAG-CTT-TAAAAA-CAAATCTGTAAAGGAACCAAAA-GC-CT--------G-G--------GCA-GA--TA-T----AAC-CACA--GTA--AATTATGA-----------AA-T--G--C-T--------A---------A---A---A------AA----A---------------------CGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-G--------------------A------T---------A--------T--T-TGGATGGCA-GTC
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          3664 151 -     55515 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------G-G--------GCA-GA--TA-T----AAC-CACA--GTA--AATTATGA-----------AA-T--G--C-T--------A---------A---A---A------AA----A---------------------CGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-G--------------------A------T---------A--------T--T-TGGATGGCA-GTC
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         23018 151 +    152463 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------G-G--------GCA-GA--TA-T----AAC-CACA--GTA--AATTATGA-----------AA-T--G--C-T--------A---------A---A---A------AA----A---------------------CGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-G--------------------A------T---------A--------T--T-TGGATGGCA-GTC
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                        735 151 -    119457 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------G-G--------GCA-GA--TA-T----AAC-CACA--GTA--AATTATGA-----------AA-T--G--C-T--------A---------A---A---A------AA----A---------------------CGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-G--------------------A------T---------A--------T--T-TGGATGGCA-GTC
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         12741 151 +    134592 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------G-G--------GCA-GA--TA-T----AAC-CACA--GTA--AATTATGA-----------AA-T--G--C-T--------A---------A---A---A------AA----A---------------------CGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-G--------------------A------T---------A--------T--T-TGGATGGCA-GTC
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          23328 151 -     75465 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------G-G--------GCA-GA--TA-T----AAC-CACA--GTA--AATTATGA-----------AA-T--G--C-T--------A---------A---A---A------AA----A---------------------CGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-G--------------------A------T---------A--------T--T-TGGATGGCA-GTC
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              187202 131 -    373494 a------------------------cagatcTGTAAAGGAACCAAAA-GC-CC--------A-G--------GCA-GA--TA-T----AAC--ACA--GTA--AATTATGA-----------AA-A--G--C-T--------A---------A---A---A------AA----A---------------------TGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-Tgat-aaagc----------c----aa------------a-a--------------------a------t---------a--------t--t-tgaatggca-gtc
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19807850 131 +  19899266 A------------------------CAGATCTGTAAAGGAACCAAAA-GC-CC--------A-G--------GCA-GA--TA-T----AAC--ACA--GTA--AATTATGA-----------AA-A--G--C-T--------A---------A---A---A------AA----A---------------------TGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGAATGGCA-GTC
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                1750  77 -      9567 ----------------------------------------------------------------------------------------------------------------------------------------------------------------A-------A----A-----------------------T-G---GAGG-GGACAAA---A--ATAA-AGT-G-AA------A-AT-CC-----------------C-CGAT-TTAAA--A-------A----AA--AGAAAAGAAAA-G--------------------A------A---------A--------ACAC-AGGATGATa-aaa
i Procavia_capensis.ProCapCap_scaffold_149274           I 89 I 210
s Presbytis_comata.k141_672698                               5794  81 -     15069 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GCA--AATTATGA-----------AA-A--A--C-T--------A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Presbytis_comata.k141_672698                          C 0 I 69
s Presbytis_mitrata.k141_860013                              5924  81 +     14865 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GCA--AATTATGA-----------AA-A--A--C-T--------A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Presbytis_mitrata.k141_860013                         C 0 I 69
s Prolemur_simus.MPIZ01000048.1                           6848571  82 +  12164890 aaagt-ttg-aagtCTTA-AGA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-TA--TA-T--AA--CT-gca--ata--aattatga-----------aa-a--t--c-t--------a---------g---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Prolemur_simus.MPIZ01000048.1                         C 0 I 67
s Propithecus_coquerelli.NW_012147863.1                     16236 119 -     30946 aaagt-ttg-aagtCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-TA--TA-T--AA--CT-GCA--ATA--AATgatga-----------aa-a--t--c-t--------a---------g--aaa--a------aa----a-----------------------a-a---gagg-tgacaaa---ca-ataa-agt-a-aa------a-at-ct-----------------------------------------------------------------------------------------------------------------------------
i Propithecus_coquerelli.NW_012147863.1                 C 0 I 664
s Propithecus_coronatus.k141_1353159                         3629 152 +     11805 AAAGT-TTG-AAGTCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-TA--TA-T--AA--CT-GCA--ATA--AATGATGA-----------AA-G--T--C-T--------A---------G--AA-AAA------AA----A-----------------------A-A---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------A---------G--------T--T-TGGATGGCA-GTC
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           42968 151 +     52369 AAAGT-TTG-AAGTCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-TA--TA-T--AA--CT-GCA--GTA--AATGATGA-----------AA-A--T--C-T--------A---------G--AA--AA------AA----A-----------------------A-A---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------A---------G--------T--T-TGGATGGCA-GTC
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         35354 152 -     44753 AAAGT-TTG-AAGTCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-TA--TA-T--AA--CT-GCA--ATA--AATGATGA-----------AA-A--T--C-T--------A---------G--AA--AA-----AAA----A-----------------------A-A---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------A---------G--------T--T-TGGATGGCA-GTC
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            17279 151 +     27322 AAAGT-TTG-AAGTCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-TA--TA-T--AA--CT-GCA--GTA--AATGATGA-----------AA-A--T--C-T--------A---------G--AA--AA------AA----A-----------------------A-A---AAAG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------A---------G--------T--T-TGGATGGCA-GTC
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       16915 151 -     53241 AAAGT-TTG-AAGTCTTA-AAA-A-CAAATCTGTAAAGGAACCGAAA-GC-CT--------A-G--------GCA-TA--TA-T--AA--CT-GCA--ATA--AATGATGA-----------AA-A--T--C-T--------A---------G--AA--AA------AA----A-----------------------A-A---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------A---------G--------T--T-TGGATGCCA-GTC
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         39179 151 -     48185 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-TA--TA-T--AA--CT-GCA--ATA--AATGATGA-----------AA-A--T--C-T--------A---------G--AA--AA------AA----A-----------------------A-A---GAGG-TGACAAA---CA-ATGA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------A---------G--------T--T-TGGATGGCA-GTC
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           34216  86 +     77221 AA-GA-TT---TGaagtcttaaaaacaaatctataaaTGCTCT--AA-GC-CT--------A-G--------GCA-GT--TA-T----AACTG-Ca--gta--aattacaa-----------a-aa--t--a-a--------a---ggagaaa---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Psammomys_obesus.NESX01026517.1                       C 0 I 67
s Pteronotus_parnellii.KE867983.1                            3817 127 -     27784 -------------------------CAAATCTG-----GAACTAAAA-GC-C-T-------A-G--------GCA-GA--TA-G----AAC-CGCA--ATA--AATtatga-----------aa-a--g--t-t--------a-------gaa--aa---aa------a----a-----------------------a-g---gaag-tgacaAA---CA-ATAA-AGT-G-AA------A-AT-TC-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------G---------A--------A--T-TGGGTGGCA-GTC
i Pteronotus_parnellii.KE867983.1                       I 20 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        246619 129 -    344369 -------------------------CAAATCTGTAAGAGAACTAAAA-GC-C-T-------A-G--------GAA-GA--TA-T----AAC-CCCA--GTA--AATTATGA-----------AA-A--G--C-T--------T-TGGG--GGA---A---A----AA-A----A-----------------------A-G---GAAG-TAAC-------A----A-AGT-A-AA------A-AT-CC-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------A---------G--------T--T-TGGATGGCA-GTC
i Pteronura_brasiliensis.PteBra_flattened_line_1343     I 20 C 0
s Pteropus_alecto.KB031157.1                             13245991  61 -  17261082 --------------------------------------------------------------------------------------------------------------------------------------------------------a---aa-aaa------a----a-----------------------a-a---gaaa-tgacaaa---ca-ataa-agt-g-aa------a-at-ct-----------------c-tgat-aaagc----------c----aa------------a-a-------------aaaataaa-------------------------------------------
i Pteropus_alecto.KB031157.1                            I 73 I 14
s Pteropus_vampyrus.KN525959.1                             603941  62 -   3946241 --------------------------------------------------------------------------------------------------------------------------------------------------------a---aagaaa------a----a-----------------------a-a---gaaa-tgacaaa---ca-ataa-agt-g-aa------a-at-ct-----------------c-tgat-aaagc----------c----aa------------a-a-------------aaaataaa-------------------------------------------
i Pteropus_vampyrus.KN525959.1                          I 73 I 14
s Puma_concolor.QAVW01000427.1                          131534335  64 - 161321710 --------------------------------------------------------------------------------------------------------------------------------------------------------a---a---a-------a----a-----------------------a-g---gaag-taacaaa---ca----a-agt-a-aa------a-at-cc-----------------c-tgat-aaagc----------c----aa------------a-a--------------------a------a---------a--------a--t-tgGATGGCA-Gtc
i Puma_concolor.QAVW01000427.1                          I 84 C 0
s Pygathrix_cinerea.k141_374971                             29912  81 +     56732 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GCA--AATTATGA-----------AA-A--A--C-T--------A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Pygathrix_cinerea.k141_374971                         C 0 I 69
s Pygathrix_nigripes_b.ctg79                                 6806400  81 +   6970761 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GCA--AATTATGA-----------AA-A--A--C-T--------A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Pygathrix_nigripes_b.ctg79                               C 0 I 69
s Pygathrix_nigripes_a.k141_101123                             5791  81 +     18040 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GCA--AATTATGA-----------AA-A--A--C-T--------A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Pygathrix_nigripes_a.k141_101123                        C 0 I 69
s Rangifer_tarandus.RanTarSib_scaffold_24239                15724 133 +     68503 -------------------------CAAATCTGTATGGGAACTAAAA-GC-C---------GAG--------GCA-GA--TA-T----AAT-GGCA--GTA--CATTATGA-----------AA-A--G--C-T--------A-CGGG---GA---A---A-------A----A-----------------------A-G---GAAG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CC-----------------C-AGAG-AAAGC----------C----AA------------A-A--------------------A------A---------A--------T--T-TGGATGGCA-GTC
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 20 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1787825  68 +   2252614 ----------------------------------------------------------------------------------------------------------------------------------------------------------------A-----A-A----A-----------------------A-G---GAAG-TGACaaa---ca-ataa-agt-g-aa------aaat-tc-----------------c-TGAT-AAAGC----------C----AA------------A-AA-------------------C------A---------A--------A--T-TGGATGACA-GTC
i Rhinolophus_sinicus.LVEH01000179.1                    I 79 C 0
s Rattus_norvegicus.chr11                                13915524  82 +  90463843 AAGGC-TCG-AAGTCTTAGAAA---CAAAT-TGTGAAAGCTCT--AA-GG-CT--------A-A--------GGa-ga--ta-t----aaata-ca--gaa--aattacaa-----------a-aa--t--c-a--------a------gaaa---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Rattus_norvegicus.chr11                               C 0 I 62
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                19309  97 +    109198 --------------------------------------------------------------------------------------------------------------------------------------------------------A---AAAAA-----A-A----A-----------------------A-A---GAAG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------T-TGAT-AAAGC----------C----AA------------A-AAACAAAACAAAAACAAAAACAAAACAAA---------A--------A--C-TGGATGGCA-GTC
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            I 73 C 0
s Rhinopithecus_bieti.k119_554384                             203  81 -     17045 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GCA--AATTATGA-----------AA-A--A--C-T--------A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Rhinopithecus_bieti.k119_554384                       C 0 I 69
s Rhinopithecus_roxellana.NC_044549.1                   206377681  81 - 206558726 aaagt-ttg-aagcCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GCA--AAttatga-----------aa-a--a--c-t--------a-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Rhinopithecus_roxellana.NC_044549.1                   C 0 I 69
s Rhinopithecus_strykeri.ctg4                            44856594  81 -  45163003 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GCA--AATTATGA-----------AA-A--A--C-T--------A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Rhinopithecus_strykeri.ctg4                           C 0 I 69
s Saiga_tatarica.SaiTat_scaffold_82192                       7891 133 +     12214 -------------------------CAAATCTGTAAGGGAACTAAAA-GC-T---------GAG--------GCA-GA--TA-T----AAC-GGCA--GCA--CATTACTA-----------AA-A--G--C-T--------A-GGGGA---A---A---A-------A----A-----------------------A-G---GAAG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-GC-----------------C-AGAG-AAAGC----------C----AA------------A-A--------------------A------A---------A--------T--T-TGGATGGCA-GTC
i Saiga_tatarica.SaiTat_scaffold_82192                  I 20 C 0
s Saimiri_boliviensis.NW_024100938.1                     15672756 151 -  43202129 aaagt-ttg-aagcCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------G-G--------GCA-GA--TG-T----AAT-CACA--GTA--AATTATGA-----------AA-T--G--C-T--------A---------A---A---A------AA----A---------------------CGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-Tgat-aaagc----------c----aa------------a-a--------------------a------t---------a--------t--t-tggaTGGCA-Gtc
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        4669 151 +     34089 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------G-G--------GCA-GA--TG-T----AAT-CACA--GTA--AATTATGA-----------AA-T--G--C-T--------A---------A---A---A------AA----A---------------------CGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGGATGGCA-GTC
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              4611 151 -     60842 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------G-G--------GCA-GA--TG-T----AAT-CACA--GTA--AATTATGA-----------AA-T--G--C-T--------A---------A---A---A------AA----A---------------------CGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGGATGGCA-GTC
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              4704 151 +     67014 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------G-G--------GCA-GA--TG-T----AAT-CACA--GTA--AATTATGA-----------AA-T--G--C-T--------A---------A---A---A------AA----A---------------------CGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGGATGGCA-GTC
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              4682 151 +     60816 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------G-G--------GCA-GA--TG-T----AAT-CACA--GTA--AATTATGA-----------AA-T--G--C-T--------A---------A---A---A------AA----A---------------------TGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGGATGGCA-GTC
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 4619 151 -     76454 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------G-G--------GCA-GA--TG-T----AAT-CACA--GTA--AATTATGA-----------AA-T--G--C-T--------A---------A---A---A------AA----A---------------------TGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGGATGGCA-GTC
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17341342 151 -  30362882 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------G-G--------GCA-GA--TA-T----AAT-CACA--GTA--AATTATGA-----------AA-T--G--T-T--------A---------A---A---A------AA----A---------------------CGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGGATGGCA-GTC
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         20701 151 -     62485 AAAGT-TTG-AAGCCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------G-G--------GCA-GA--TA-T----AAT-CACA--GTA--AATTATGA-----------AA-T--G--T-T--------A---------A---A---A------AA----A---------------------CGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGGATGGCA-GTC
i Sapajus_macrocephalus.k141_966464                     C 0 I 6
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   32243 141 -    114521 -------------------------CAAATCTGTAAAGAAATGAAAA-GTCT---------A-G--------GCA-AA--TA-T----AAC-CTCA--GTA--AATCACGA-----------AA-A--A--C-T--------A-G---A---AG--A---A-------A----A-----------------------A-G---GAAG-TGAC-------A-ATGA-AGT-A-AA------A-AT-CC-----------------C-TGAT-AAAGTCTACCTC--TC----AA------------A-A--------------------A------AATAA--TA-A--------A--T-TGGATGGCA-GTC
i Scalopus_aquaticus.ScaAqu_scaffold_9300               I 20 C 0
s Semnopithecus_entellus.k141_1572367                        3405  81 +     15331 AAAGT-TTG-AAGCCTTA-AAA-A-CAGATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GCA--AATTATGA-----------AA-A--A--C-T--------A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Semnopithecus_entellus.k141_1572367                   C 0 I 67
s Semnopithecus_hypoleucos.k141_761524                       8800  81 +     20762 AAAGT-TTG-AAGCCTTA-AAA-A-CAGATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GCA--AATTATGA-----------AA-A--A--C-T--------A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Semnopithecus_hypoleucos.k141_761524                  C 0 I 67
s Semnopithecus_johnii.k141_785014                         118803  81 +    130994 AAAGT-TTG-AAGCCTTA-AAA-A-CAGATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GCA--AATTATGA-----------AA-A--A--C-T--------A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Semnopithecus_johnii.k141_785014                      C 0 I 67
s Semnopithecus_priam.k141_410937                           37589  81 +     46263 AAAGT-TTG-AAGCCTTA-AAA-A-CAGATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GCA--AATTATGA-----------AA-A--A--C-T--------A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Semnopithecus_priam.k141_410937                       C 0 I 67
s Semnopithecus_schistaceus.k141_387461                     30707  81 +     42640 AAAGT-TTG-AAGCCTTA-AAA-A-CAGATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GCA--AATTATGA-----------AA-A--A--C-T--------A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Semnopithecus_schistaceus.k141_387461                 C 0 I 67
s Semnopithecus_vetulus.k141_1143185                        13748  81 +     30600 AAAGT-TTG-AAGCCTTA-AAA-A-CAGATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GCA--AATTATGA-----------AA-A--A--C-T--------A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Semnopithecus_vetulus.k141_1143185                    C 0 I 67
s Sigmodon_hispidus.SigHis_scaffold_11332                  100257  83 -    120886 AAGGT-TTG-AAGT-T-GTAAAAA-CAAATCTGTAAGTGCTCT--AA-GC-CT--------A-G--------GCA-GA--TA-C----AACTG-TA--GTA--AAGTAGAA-----------A-AG--T--C-A--------A-GGG-----A---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 I 65
s Solenodon_paradoxus.SolPar_flattened_line_1012            18810 137 +    739146 -------------------------CAAGCCTGTAAAGTAACTAAAA-GC-C---------A-G--------GCA-GA--TA-T----AAT-CTCA--GTA--AATTATGA-----------AA-A--G--C-T--------A-G---A---A---A---A-------A----A-----------------------A-G---AAAG-TGACAAA---CA-ATAA-AGT-T-AA------A-AT-CC-----------------C-TGAT-AAAGCTTGCC-CTC-C----AA------------A-A--------------------A------A---------A--------C--T-TGGATGGCA-GTC
i Solenodon_paradoxus.SolPar_flattened_line_1012        I 19 C 0
s Spermophilus_dauricus.KZ294190.1                        2239710 152 +   2842873 aaagt-ttg-aAGTCTTA-AAA-A-CAAATCTGCAGG-GAACTAAAA-AC-CT--------A-G--------GCA-GA--TA-T----AACTG-CA--GTA--AATTATGA-----------AAagcta--c-a--------a--------gg---a---aaaaa---a----a-----------------------a-g---gaag-cgaT------CA-ACAA-AGT-G-AA------A-AT-CT-----------------C-AGAT-AAAGC----------C----AA------------A-A--------------------A------A---------T--------T--T-TGGATGGCA-gtc
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             234740 114 -    276980 -------------------------CAAATCTGCAAGAGAGCTGAAA-GC-C-T-------A-G--------GAA-GA--TA-T----AAC-CCCA--GTA--AATTATGA-----------AA-A--G--A-T--------C-TGGGA--GA---G---G-----G-G----A-----------------------A-G---GAAG-TAACAAA---CA----A-AGT-A-AA------A-AT-CC-----------------C-TGAT-AAAGC----------C----AA------------A------------------------------------------------------------------
i Spilogale_gracilis.SpiGra_flattened_line_905          I 20 I 17
s Suricata_suricatta.SurSur_flattened_line_20339            27529 129 +     62062 -------------------------CAAATCTGTAAGAGAACTAAAT-GT-C-T-------A-G--------GCA-GA--TA-T----AAC-CCCA--GTA--AATTATGA-----------AA-A--G--C-T--------A-TGG-----G---A---A-------A----A-----------------------A-G---AAAG-TAACAAA---CA----A-AGT-A-AA------A-AT-CC-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------AA--------A--------T--T-TGGATGGCA-GTC
i Suricata_suricatta.SurSur_flattened_line_20339        I 20 C 0
s Sus_scrofa.CM000824.4                                 189271804 132 + 218635234 -------------------------CAAATCTGTAAGGGAACTAAAA-GC-C---------TAG--------GCA-GA--TA-T----AAC-CGCA--GTA--AGTTatga-----------aa-a--g--c-a--------a-----gggaa---a---a-------a----a-----------------------a-g---gaag-tggcaaa---ca-ataa-aat-g-aa------a-aa-tc-----------------c-tgat-aaagc----------c----aa------------a-a--------------------a------a---------a--------a--t-tggatggca-gtc
i Sus_scrofa.CM000824.4                                 I 20 C 0
s Symphalangus_syndactylus.tarseq_24                        14954 131 -  13920577 A------------------------CAAATCTGTAAAGGAACCAAAA-GC-CC--------A-G--------GCA-GA--TA-T----AAC--ACA--GTA--ACTTATGA-----------AA-A--G--C-T--------A---------A---A---A------AA----A---------------------TGA-G---GAGG-TAACAAA---CA-ATAA-AGT-G-AA------A-CT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------T---------A--------T--T-TGAATGGCA-GTC
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                 223 105 +     20549 -------------------------------------------------------------A-G--------GCA-GA--TA-G----AAG-CACA--ATA--AATTATGA-----------AA-A--G--T-T--------A-GG------G---A---A-----A-A----A-----------------------A-G---GAAG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------A---------A--------A--A-TGGATTGCA-GCC
i Tadarida_brasiliensis.TadBra_scaffold_61492           I 203 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               14664  67 +     45698 -------------------------CAAATCTGTAAGGAAA-TACAA-GC-CT--------A-C--------GCA-GA--TA-T----AAC-AGCA--GTG--AATTATCA-----------GA-A--G--G-A--------G-G------TG---A---C-------A----A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Tamandua_tetradactyla.TamTet_scaffold_26877           I 25 I 49
s Tapirus_indicus.TapInd_scaffold_176                      807080 130 +   1148477 -------------------------CAAATCTGTAAAGGAACTAAAA-GC-T-T-------A-G--------GC--GG--TA-T----AACT-GCG--GTA--AATTATGG-----------AA-A--G--C-T--------A-GG------G---A--AA-------A----A-----------------------A-T---GAAG-TGACAAA---CA-ATAA-AGT-G-AA------A-TT-CC-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------A---------A--------T--T-TGGATGGCA-ATC
i Tapirus_indicus.TapInd_scaffold_176                   I 20 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  57775 131 +     99546 -------------------------CAAATCTGTAAAGGAACTAAAA-GC-T-T-------A-G--------GC--AG--TA-T----AACT-GCA--GTA--AATTATGG-----------AA-A--G--C-T--------A-GG------G---A--AA-------A----A-----------------------A-T---GAAG-TGACAAA---CA-ATAA-AGT-G-AA------A-TT-CC-----------------C-TGAT-AAAGC----------C----AA------------A-AA-------------------A------A---------A--------T--T-TGGATGGCA-ATC
i Tapirus_terrestris.TapTer_scaffold_14939              I 20 C 0
s Tarsius_lariang.k141_609102                               26473 152 +     42269 AAAGT-TTA-AAGTCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GGA-GA--TA-T----AACT-GCA--GTA--AATTATAA-----------AA-A--G--C-T--------A---------A---A---A------AA----A---------------------AAATG---GAAG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-TGAT-AAAAC----------C----AA------------A-C--------------------A------T---------T--------T--T-TGGATGGCA-GTC
i Tarsius_lariang.k141_609102                           I 3 C 0
s Tarsius_wallacei.k141_48636                               59789 152 +     65473 AAAGT-TTA-AAGTCTTA-AAA-A-CAAATCTGTAAAGGAATCAAAA-GC-CT--------A-G--------GGA-GA--TA-T----AACT-GCA--GTA--AATTATAA-----------AA-A--G--C-T--------A---------A---A---A------AA----A---------------------AAATG---GAAG-TGACAAA---CA-ATAA-AGT-C-AA------A-AT-CT-----------------C-TGAT-AAAAC----------C----AA------------A-C--------------------A------T---------T--------T--T-TGGATGGCA-GTC
i Tarsius_wallacei.k141_48636                           I 3 C 0
s Theropithecus_gelada.CM009951.1                       194007799 151 - 194193292 aaagt-ttg-aagcCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-A--------GCA-GA--TA-T----AAC-CACA--GCA--AATTATGA-----------AA-A--G--C-T--------A---------A---A---A------AA----A---------------------TGA-G---GAGG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CT-----------------C-Tgat-aaagc----------c----aa------------a-a--------------------a------t---------a--------t--t-tgaatggca-gtc
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  5488  66 +      6782 -------------------------CAAATCTGTAAGGGAACTAAAA-GC-CT--------A-C--------A---GA--TA-T----AAC-AGCA--GTG--AATTATGA-----------AA-A--G--C-T--------A-G---A---G---A---A-------A----A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Tolypeutes_matacus.TolMat_scaffold_269431             I 25 I 45
s Tonatia_saurophila.TonSau_scaffold_3334                  135808 128 -    259118 -------------------------CAAATCTG-----GAACTAAAA-GC-C-T-------A-G--------GCA-GA--TA-G----AACT-GCA--ATA--AATTATGA-----------AA-A--A--T-T--------A-GG------GG--G---G-----A-A--A-A-----------------------A-G---GAAG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-TC-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------A---------A--------A--T-TGGATGGCA-GTC
i Tonatia_saurophila.TonSau_scaffold_3334               I 20 C 0
s Trachypithecus_auratus.k141_738098                        26905  81 +     38948 AAAGT-TTG-AAGCCTTA-AAA-A-CAGATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GCA--AATTATGA-----------AA-A--A--C-T--------A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Trachypithecus_auratus.k141_738098                    C 0 I 67
s Trachypithecus_crepusculus.k141_1588528                   20637  81 -     32910 AAAGT-TTG-AAGCCTTA-AAA-A-CAGATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GCA--AATTATGA-----------AA-A--A--C-T--------A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Trachypithecus_crepusculus.k141_1588528               C 0 I 67
s Trachypithecus_cristatus.k141_1011511                      2023  81 -     12939 AAAGT-TTG-AAGCCTTA-AAA-A-CAGATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GCA--AATTATGA-----------AA-A--A--C-T--------A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Trachypithecus_cristatus.k141_1011511                 C 0 I 67
s Trachypithecus_francoisi.k141_768164                       1959  81 -     14244 AAAGT-TTG-AAGCCTTA-AAA-A-CAGATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GCA--AATTATGA-----------AA-A--A--C-T--------A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Trachypithecus_francoisi.k141_768164                  C 0 I 67
s Trachypithecus_geei.k141_670367                           43358  81 -     54611 AAAGT-TTG-AAGCCTTA-AAA-A-CAGATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GCA--AATTATGA-----------AA-A--A--C-T--------A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Trachypithecus_geei.k141_670367                       C 0 I 67
s Trachypithecus_germaini.k141_868450                        1162  81 -     11566 AAAGT-TTG-AAGCCTTA-AAA-A-CAGATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------ACA-GA--TA-T----AAC-CACA--GCA--AATTATGA-----------AA-A--A--C-T--------A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Trachypithecus_germaini.k141_868450                   C 0 I 67
s Trachypithecus_hatinhensis.k141_504423                     3338  81 -     15592 AAAGT-TTG-AAGCCTTA-AAA-A-CAGATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GCA--AATTATGA-----------AA-A--A--C-T--------A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Trachypithecus_hatinhensis.k141_504423                C 0 I 67
s Trachypithecus_laotum.k141_760702                          1993  81 +     14371 AAAGT-TTG-AAGCCTTA-AAA-A-CAGATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GCA--AATTATGA-----------AA-A--A--C-T--------A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Trachypithecus_laotum.k141_760702                     C 0 I 67
s Trachypithecus_leucocephalus.k141_381681                    275  81 +     12481 AAAGT-TTG-AAGCCTTA-AAA-A-CAGATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GCA--AATTATGA-----------AA-A--A--C-T--------A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Trachypithecus_leucocephalus.k141_381681              C 0 I 67
s Trachypithecus_melamera.k141_699241                         155  81 -     24393 AAAGT-TTG-AAGCCTTA-AAA-A-CAGATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GCA--AATTATGA-----------AA-A--A--C-T--------A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Trachypithecus_melamera.k141_699241                   C 0 I 67
s Trachypithecus_obscurus.k141_1115109                       5396  81 -     28054 AAAGT-TTG-AAGCCTTA-AAA-A-CAGATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GCA--AATTATGA-----------AA-A--A--C-T--------A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Trachypithecus_obscurus.k141_1115109                  C 0 I 67
s Trachypithecus_phayrei.ctg3                            44660196  81 -  44834318 AAAGT-TTG-AAGCCTTA-AAA-A-CAGATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GCA--AATTATGA-----------AA-A--A--C-T--------A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Trachypithecus_phayrei.ctg3                           C 0 I 67
s Trachypithecus_pileatus.k141_1022309                       2503  81 +     13828 AAAGT-TTG-AAGCCTTA-AAA-A-CAGATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-GA--TA-T----AAC-CACA--GCA--AATTATGA-----------AA-A--A--C-T--------A-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
i Trachypithecus_pileatus.k141_1022309                  C 0 I 67
s Tragulus_javanicus.TraJav_scaffold_14717                   5117 134 +     90398 -------------------------CAAATCTGTAAGGAAACTAAAC-GC-C---------GAG--------GCA-GA--TA-C----AAC-GGCA--GTA--CATTATGG-----------AA-A--G--C-T--------A-GGGGGA--A---A---A-------A----A-----------------------A-G---GAAG-TGACAAA---CA-ATAA-AGC-G-AA------A-AT-CC-----------------C-AGAG-AAAGC----------C----AA------------A-A--------------------A------A---------A--------A--T-TGGATGACA-GTC
i Tragulus_javanicus.TraJav_scaffold_14717              I 20 C 0
s Trichechus_manatus.JH594618.1                          16084842 140 +  31416278 -------------------------CAACTCTGTAAGGTAACTAAAC-AC-CT--------A-A--------GCA-GA--TA-G----AAC-AGTA--ACA--AATTATGA-----------AA-A--G--C-T--------A-G---A---A---A---A-------A----A-----------------------T-A---GAGA-Ggacaaa---aa-ataa-agt-g-aa------a-at-ct-----------------c-caat-aaagt----------a----aaaa-aa-aacaaaa-c--------------------a------a---------a--------a--c-tggatgata-gca
i Trichechus_manatus.JH594618.1                         I 25 I 22
s Tupaia_chinensis.KB320831.1                             2792845 159 -   3938065 aaagg-ttG-AAGACTTA-AAA-A-CAAATCTGTACGGGAACTAAGT-Gt-ct--------a-g--------gta-tatata-tataaaac-caca--gtaaaaattataa-----------aa-a--g--c-t--------t--------ta---a---a-------a----a-----------------------a-g---gaGG-TGACCAA---CA-Atgt-aa--a-aa------a-at-ct-----------------c-taat-aagat----------tttt-tt------------t-a--------------------a------a---------a--------a--t-ggggtgaTA-Gtc
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    5056 151 +     13056 AAAGG-TTG-AAGACTTA-AAA-A-CAAATCTGTATGGGAACTAAGT-GT-CT--------A-G--------GTA-TATATA-T----AAC-CACA--GTAAAAATTATAA-----------AA-A--G--T-T--------T--------TA---A---A-------A----A-----------------------A-G---GAGG-TGACCAA---CA-ATGT-AA--A--A------A-AT-CT-----------------C-TGAT-AAGGT----------T----TT------------A-A--------------------A------A---------A--------A--T-GGGGTGATA-GTC
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69313372 132 -  96451834 -------------------------CAAATCTGTAAGGGAACTAAAA-GC-C---------TAG--------GCA-GA--TA-C----AAC-CACA--GTA--AATTATGA-----------AA-A--g--c-t--------a-----gggga---a---a-------a----a-----------------------a-g---gaag-tgaCAAA---CA-ATAA-AGT-G-AA------A-AT-CC-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------A---------A--------A--C-TGGATGACA-Gtc
i Tursiops_truncatus.MRVK01000923.1                     I 20 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   1271 147 +     10241 -------------------------TAAATCTGTAAAGAAATGAAAA-GTCT---------A-G--------GGA-AA--TAGT----AAC-CTCA--GTG--AATTATGA-----------CA-A--G--C-T--------A-G---A---AG--A---A-------A----A-----------------------A-G---GAAG-TGAC-------A-AAGA-AGT-A-AA------A-AT-CC-----------------C-TGAC-AAAGTCCACCTCCCCC----CA------------A-A--------------------A------AATAAAATAAA--------A--G-TGTATAGTC-GTC
i Uropsilus_gracilis.UroGra_scaffold_69449              I 20 C 0
s Ursus_maritimus.KK498671.1                              6514754 131 +  28682327 -------------------------caaatctgtAGGAGAACTAAAA-GC-C-T-------A-G--------GCA-GA--TA-T----AAC-CCCA--GTA--AATCATGA-----------AA-a--g--c-t--------a---tggggga---a---a-------a----a-----------------------a-g---gaag-taacGAA---CA----A-AGT-A-AA------A-AT-CC-----------------C-TGAT-AAAGC----------C----TA------------A-A--------------------A------A---------G--------T--C-TGGATGTca-gtc
i Ursus_maritimus.KK498671.1                            I 20 C 0
s Varecia_rubra.k141_432109                                  5270 150 -     20643 AAAGT-TTG-AAGTCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-TA--TT-T--AA--CT-GCA--GTA--AATTATGA-----------AA-A--T--C-T--------A---------G--AA---A------AA----A-----------------------A-A---GAGG-TGACAAA---CA-ATAA-AGC-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------A---------G--------T--T-TGGATGGCA-GTC
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             24811 150 -     33872 AAAGT-TTG-AAGTCTTA-AAA-A-CAAATCTGTAAAGGAACCAAAA-GC-CT--------A-G--------GCA-TA--TT-T--AA--CT-GCA--GTA--AATTATGA-----------AA-A--T--C-T--------A---------G--AA---A------AA----A-----------------------A-A---GAGG-TGACAAA---CA-ATAA-AGC-G-AA------A-AT-CT-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------A---------G--------T--T-TGGATGGCA-GTC
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1524645 103 -   2331223 ---------------------------------------------------------------G--------GCA-GA--TA-T----AAC-CACA--GTA--AGTTATGA-----------aa-a--g--c-t--------a---gggggaa---a---a-------a----a-----------------------a-t---gaag-tgac-------a-ATAA-AGT-G-AA------A-AT-CC-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------A---------T--------T--T-TGGACGACA-GTc
i Vicugna_pacos.KN269600.1                              I 41 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                138263  85 -    281493 -------------------------CAAATCTGTAAGAGAGCTAAAA-GC-C-T-------A-G--------GCA-GA--TA-T----AAC-CCCA--GCA--AATTATGA-----------AA-A--G--C-T--------A-TGGG--GGG---A---A-------A----A-----------------------A-G---GAAG-TAACAAA-------------------------------------------------------------------------------------------------------------------------------------------------------------
i Vulpes_lagopus.VulLag_flattened_line_2045             I 23 I 50
s Xerus_inauris.XerIna_scaffold_7898                       126827 150 -    134049 AAAGT-TTG-AAGTCTTA-AAA-A-CAAATCTGCACA-GAACTAAAA-AC-CT--------A-G--------GCA-GA--TA-T----AACTG-CA--GTA--AATTATGA-----------AAAGCTA--G-A--------A-G-------A---A---A-----A-A----A-----------------------A-G---GAAG-CGAT------CA-ACAA-AGC-G-AA------A-AT-CT-----------------C-AGAT-AAAGC----------C----AA------------AAA--------------------A------A---------T--------T--T-TGGATGGCA-GTC
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        214231 135 -    227762 -------------------------CAAATCTGTAAGAAAACTAAAA-GC-C-T-------A-G--------GCA-GA--TA-T----AAC-CCCA--GTA--AATTATGA-----------AA-A--G--C-T--------A-TGGG--GGA---A---A----AA-A----A-----------------------A-G---GAAG-TAACAAA---CA----A-AGT-A-AAAA----A-AT-CC-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------A---------G--------T--T-TGGATGGCA-GTC
i Zalophus_californianus.ZalCal_flattened_line_4097     I 20 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     14935 147 -     20485 AAGGT-TTG-AAGACTTA-AAA-A-CAAATCTGGAAGGGAACT--AC-GC-CT--------A-G--------GCA-GA--TA-G----AACTG-CA--GCA--GATGATGA-----------A-AA--G--C-C--------A--------CT---G---A-------A----A-----------------------A-G---GAGG-AGACAAA---CA-ATAA-AGT-G-AG------A-AT-CT-----------------T-TGAA-AAAGC----------T----GG------------A-A--------------------A------A---------A--------A--A-GGGATGGCT-ATC
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           6872 132 -      8775 -------------------------CAAATCTGTAAGGGAACTAAAA-GC-C---------TAA--------GCA-GA--TC-C----AAC-CGCA--GTA--AATTATGA-----------AA-A--G--C-A--------A-GGGG----A---A---A-------A----A-----------------------A-G---GAAG-TGACAAA---CA-ATAA-AGT-G-AA------A-AT-CC-----------------C-TGAT-AAAGC----------C----AA------------A-A--------------------A------A---------A--------T--T-TGGATGACA-GTC
i Ziphius_cavirostris.ZipCav_flattened_line_127025      I 20 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             38964   0 -     47444 C
e Sorex_araneus.JH798170.1                               17750754 3364 -  27805282 I
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               11930  7 +    209709 A-A-C--A---A---A-----A
s Acomys_cahirinus.AcoCah_scaffold_1625                    112700  5 -    189883 -------G---A---A----AA
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 66 C 0
s Acinonyx_jubatus.LLWD01000356.1                         2034060  2 +   3721120 a-a-------------------
i Acinonyx_jubatus.LLWD01000356.1                       C 0 I 8
s Ailuropoda_melanoleuca.LNAT01000321.1                  10657397  2 +  23371972 a-a-------------------
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 I 14
s Ailurus_fulgens.LNAC01000003.1                          7094742  2 -  16596857 a-a-------------------
i Ailurus_fulgens.LNAC01000003.1                        C 0 I 12
s Allactaga_bullata.AllBul_scaffold_70162                   16975  8 -     22067 A-A-G--A---A---A----AA
i Allactaga_bullata.AllBul_scaffold_70162               C 0 I 9
s Allenopithecus_nigroviridis.k141_2469532                   1443  5 -     60446 ----A--A---A---A-----A
i Allenopithecus_nigroviridis.k141_2469532              I 1 C 0
s Allochrocebus_lhoesti.k141_3566948                         2161  7 -     29318 A-A-A--A---A---A-----A
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         1096  7 +     38766 A-A-A--A---A---A-----A
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          2055  7 -     80423 A-A-A--A---A---A-----A
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            10358  5 -     18050 A-A-A--A---A----------
i Alouatta_belzebul.k141_1818029                        C 0 I 2
s Alouatta_caraya.k141_5460                                 11451  5 -     11521 A-A-A--A---A----------
i Alouatta_caraya.k141_5460                             C 0 I 2
s Alouatta_discolor.k141_811576                             11031  5 -     21359 A-A-A--A---A----------
i Alouatta_discolor.k141_811576                         C 0 I 2
s Alouatta_juara.k141_1244470                                 650  5 +      2129 A-A-A--A---A----------
i Alouatta_juara.k141_1244470                           C 0 I 2
s Alouatta_macconnelli.k141_1331706                         10331  5 -     10438 A-A-A--A---A----------
i Alouatta_macconnelli.k141_1331706                     I 60 I 2
s Alouatta_nigerrima.k141_3537692                              83  5 +      1660 A-A-A--A---A----------
i Alouatta_nigerrima.k141_3537692                       N 0 I 2
s Alouatta_palliata.k141_2764429                                0  7 -      1480 --A-A--A---AA--A-----A
i Alouatta_palliata.k141_2764429                        n 7 I 125
s Alouatta_puruensis.k141_1284840                            4076  5 -      4927 A-A-A--A---A----------
i Alouatta_puruensis.k141_1284840                       C 0 I 2
s Alouatta_seniculus.k141_1531728                             215  5 -      1692 A-A-A--A---A----------
i Alouatta_seniculus.k141_1531728                       C 0 I 2
s Ammotragus_lervia.NIVO01013474.1                        3520197 10 +   4113121 a-a-a--a---a---aaaa--a
i Ammotragus_lervia.NIVO01013474.1                      C 0 I 4
s Anoura_caudifer.AnoCau_scaffold_422                      390394  2 -    631301 A-A-------------------
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 I 9
s Antilocapra_americana.AntAmePen_scaffold_42841            30782  7 +     33004 A-A-A--A---A---C-----A
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 I 14
s Aotus_azarae.k141_3170768                                 62718  6 +     78111 A-A-AA-A---A----------
i Aotus_azarae.k141_3170768                             C 0 I 8
s Aotus_griseimembra.k141_3275623                            5660  5 +     22701 A-A-AA-A--------------
i Aotus_griseimembra.k141_3275623                       C 0 I 9
s Aotus_nancymaae.KZ196176.1                              5749617  6 +   9889416 a-a-a-aa---a----------
i Aotus_nancymaae.KZ196176.1                            C 0 I 8
s Aotus_trivirgatus.k141_1740727                             6205  9 -    104377 A-A-AA-A---AA--A-----A
i Aotus_trivirgatus.k141_1740727                        C 0 I 6
s Aotus_vociferans.k141_718647                               6207  6 +     23246 A-A-AAAA--------------
i Aotus_vociferans.k141_718647                          C 0 I 9
s Aplodontia_rufa.AprRuf_scaffold_156013                     3795  5 +      5067 -------A---A---A----TA
i Aplodontia_rufa.AprRuf_scaffold_156013                I 3 C 0
s Arctocebus_calabarensis.k141_587554                        1130  7 +      9265 A-A-A--A---A---A-----A
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 8803  2 -     29036 A-A-------------------
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 I 8
s Ateles_geoffroyi_b.tarseq_2582                             9539467  8 +  39197703 A-A-A--A---AA--A-----A
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             60738  8 +     85812 A-A-A--A---AA--A-----A
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                11751  8 +     89302 A-A-A--A---AA--A-----A
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             16254  8 -     58268 A-A-A--A---AA--A-----A
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             64246  8 +    119057 A-A-A--A---AA--A-----A
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               6217  8 -     25888 A-A-A--A---AA--A-----A
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 6863  8 -     16375 A-AAA--A---A---A-----A
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                                482  8 +      6337 A-AAA--A---A---A-----A
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26380279  3 +  51448160 a-a-a-----------------
i Balaenoptera_acutorostrata.KI537095.1                 C 0 I 4
s Balaenoptera_bonaerensis.DF502048.1                        5448  3 -     13118 a-a-a-----------------
i Balaenoptera_bonaerensis.DF502048.1                   C 0 I 4
s Beatragus_hunteri.BeaHun_scaffold_21644                   43264 11 -     72089 A-A-A--A---A---A-AAAAA
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 I 4
s Bison_bison.KN264915.1                                  6559933  5 +   6870073 a-a-a--a---a----------
i Bison_bison.KN264915.1                                C 0 I 5
s Bos_indicus.CM003021.1                                138140042  5 - 161108492 a-a-a--a---a----------
i Bos_indicus.CM003021.1                                C 0 I 5
s Bos_mutus.JH883513.1                                     572581  5 -    998990 a-a-a--a---a----------
i Bos_mutus.JH883513.1                                  C 0 I 5
s Bos_taurus.CM000177.6                                 136295775  5 - 158972876 a-a-a--a---a----------
i Bos_taurus.CM000177.6                                 C 0 I 5
s Bubalus_bubalis.KI419065.1                              1232856  5 -   1914593 a-a-a--a---a----------
i Bubalus_bubalis.KI419065.1                            C 0 I 10
s Cacajao_ayresi.k141_724503                               114100 11 -    171031 A-A-A--AAAAAA--A-----A
i Cacajao_ayresi.k141_724503                            C 0 I 2
s Cacajao_calvus.k141_96166                                 13132  8 +    125063 A-A-A--A---AA--A-----A
i Cacajao_calvus.k141_96166                             C 0 I 2
s Cacajao_hosomi.k141_303789                                15173 10 -    216513 A-A-A--AAA-AA--A-----A
i Cacajao_hosomi.k141_303789                            C 0 I 2
s Cacajao_melanocephalus.k141_1160263                        7716 10 -    134917 A-A-A--AAA-AA--A-----A
i Cacajao_melanocephalus.k141_1160263                   C 0 I 2
s Camelus_bactrianus.KN276303.1                           3219643  2 -   8989139 a-a-------------------
i Camelus_bactrianus.KN276303.1                         C 0 I 6
s Camelus_dromedarius.KN271192.1                           397344  2 -  15254737 a-a-------------------
i Camelus_dromedarius.KN271192.1                        C 0 I 6
s Camelus_ferus.KB016973.1                                2973080  2 +   6889770 a-a-------------------
i Camelus_ferus.KB016973.1                              C 0 I 6
s CanFam4.chr31                                          11519560  2 +  39901454 A-A-------------------
i CanFam4.chr31                                         I 50 I 24
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   14585  2 +     87036 A-A-------------------
i Canis_lupus_VD.CanFam_VD_scaffold_16982               I 50 I 24
s Canis_lupus_dingo.QKWQ01001993.1                       11266227  2 -  35597290 a-a-------------------
i Canis_lupus_dingo.QKWQ01001993.1                      I 50 I 24
s Canis_lupus_familiaris.chr31                           11088761  2 +  39895921 a-a-------------------
i Canis_lupus_familiaris.chr31                          I 50 I 24
s Canis_lupus_orion.HG994411.1                           16455776  2 -  44759192 a-a-------------------
i Canis_lupus_orion.HG994411.1                          I 50 I 24
s Capra_aegagrus.CM003214.1                              21325274  9 + 157394656 a-a-a--a---a---aaa---a
i Capra_aegagrus.CM003214.1                             C 0 I 4
s Capra_hircus.CM004562.1                               135706501 10 - 157403528 a-a-a--a---a---aaaa--a
i Capra_hircus.CM004562.1                               C 0 I 4
s Carlito_syrichta.NW_007248099.1                          309142  8 +    345090 aaa-a--a---a---a-----a
i Carlito_syrichta.NW_007248099.1                       I 69 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               59595  2 +     67245 A-A-------------------
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 I 8
s Castor_canadensis.CasCan_scaffold_47037                   30806  9 +     33760 A-T-A--A---G--CA----AA
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   158961  7 -    276539 A-A-G--A---A---G-----A
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 I 10
s Cavia_aperea.AVPZ01000278.1                            15786678  8 -  24422027 N-N-N--N---N---N----NN
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15798614  8 -  24440124 A-G-A--A---A---A----TA
i Cavia_porcellus.DS562889.1                            I 75 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       176805  8 +    436027 A-G-A--A---A---A----TA
i Cavia_tschudii.CavTsc_scaffold_488                    I 75 C 0
s Cebus_albifrons.Contig22                               18890949  5 -  29618158 A-A-AA-A--------------
i Cebus_albifrons.Contig22                              C 0 I 5
s Cebus_olivaceus.k141_93739                                 8493  5 -     26817 A-A-AA-A--------------
i Cebus_olivaceus.k141_93739                            C 0 I 5
s Cebus_unicolor.k141_239009                                12733  5 +     25043 A-A-AA-A--------------
i Cebus_unicolor.k141_239009                            C 0 I 8
s Cephalopachus_bancanus.k141_702587                         8180  8 +     21754 AAA-A--A---A---A-----A
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4363955  2 +   7569818 a-a-------------------
i Ceratotherium_simum.JH767818.1                        C 0 I 7
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         3712  2 -      9338 A-A-------------------
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 I 7
s Cercocebus_atys.KQ010443.1                              6555387  7 +   6739814 a-a-a--a---a---a-----c
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      26864  7 +     60454 A-A-A--A---A---A-----C
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          2070  7 -     21101 A-A-A--A---A---A-----C
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         59379  7 -    107033 A-A-A--A---A---A-----C
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        2269  7 -     17608 A-A-A--A---A---A-----A
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          29765  7 +     30494 A-A-A--A---A---A-----A
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          58610  7 -     59240 A-A-A--A---A---A-----A
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          2311  7 +     16677 A-A-A--A---A---A-----A
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           24470  7 +     35983 A-A-A--A---A---A-----A
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11990997  7 +  12117833 A-A-A--A---A---A-----A
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46477756  7 +  46592721 A-A-A--A---A---A-----A
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      41307  7 -     45581 A-A-A--A---A---A-----A
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       2312  7 +     35577 A-A-A--A---A---A-----A
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        2088  7 -     25661 A-A-A--A---A---A-----A
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        2067  7 -     17744 A-A-A--A---A---A-----A
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        21682  7 +     37128 A-A-A--A---A---A-----A
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           2841  2 -      6963 A-A-------------------
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      I 45 I 18
s Cheirogaleus_major.k141_1157592                           59147  7 -     68416 A-A-A--A---A---A-----A
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            8192  7 +     13308 A-A-A--A---A---A-----A
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             5759 10 -     18223 AAAAA--A---AA--A-----A
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             22780  9 +     25473 A-AAA--A---AA--A-----A
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           41817 10 +     57117 AAAAA--A---AA--A-----A
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          46496 10 +     54541 AAAAA--A---AA--A-----A
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15961821  8 +  43084221 A-G-A--A---A---A----TA
i Chinchilla_lanigera.JH721867.1                        I 65 C 0
s Chiropotes_israelita.k141_1189915                         71306  8 +    196370 A-A-A--A---AA--A-----A
i Chiropotes_israelita.k141_1189915                     I 2 C 0
s Chiropotes_sagulatus.k141_773804                          15486  8 +     40510 A-A-A--A---AA--A-----A
i Chiropotes_sagulatus.k141_773804                      I 2 C 0
s Chlorocebus_aethiops.ctg22                             15139202  7 -  15256731 A-A-A--A---A---A-----A
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      34283  7 -     53260 A-A-A--A---A---A-----A
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101144843  7 + 101219884 a-a-a--a---a---a-----a
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                16542  2 -     21363 A-A-------------------
i Choloepus_didactylus.ChoDid_scaffold_36182            I 45 I 24
s Choloepus_hoffmanni.KN194586.1                           761850  2 +    964067 a-a-------------------
i Choloepus_hoffmanni.KN194586.1                        I 45 I 19
s Chrysochloris_asiatica.ChrAsi_scaffold_1707876              676  7 +       793 c-a-g--a---a---g-----a
i Chrysochloris_asiatica.ChrAsi_scaffold_1707876        C 0 I 5
s Colobus_angolensis.KN985967.1                          10886611  8 +  10971483 a-a-a--a--aa---a-----a
i Colobus_angolensis.KN985967.1                         I 69 C 0
s Colobus_guereza.LG08                                  147664777  7 + 156195979 A-A-A--A---A---A-----A
i Colobus_guereza.LG08                                  I 69 C 0
s Colobus_polykomos.k141_1406057                            16762  7 +     23629 A-A-A--A---A---A-----A
i Colobus_polykomos.k141_1406057                        I 69 C 0
s Condylura_cristata.JH655880.1                          60613693  6 +  78930452 --a-a--a---a---g-----g
i Condylura_cristata.JH655880.1                         I 21 I 8
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         39779  2 -     40477 A-A-------------------
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 I 10
s Cricetomys_gambianus.CriGam_scaffold_949                 278656  8 -    399297 A-A-G--G---A---A----AA
i Cricetomys_gambianus.CriGam_scaffold_949              I 54 C 0
s Cricetulus_griseus.LT883672.1                          53029325  8 +  72327488 a-a-g--g---a---aa----a
i Cricetulus_griseus.LT883672.1                         I 65 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            52095  2 -     70449 A-A-------------------
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 I 8
s Ctenodactylus_gundi.CteGun_scaffold_447                  208226  8 -    956709 A-A-A--A---A---A----TA
i Ctenodactylus_gundi.CteGun_scaffold_447               I 69 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 30810  8 -     67205 A-G-A--A---A---A----CA
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                17856  8 +     26546 A-G-A--A---A---A----TA
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             58948  8 -    236241 A-G-A--A---A---A----TA
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          183726  2 -   6883506 a-a-------------------
i Dasypus_novemcinctus.JH568778.1                       I 37 I 18
s Daubentonia_madagascariensis.ctg11                     16844999  7 +  31942871 A-A-A--A---A---A-----T
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80036902  3 -  96802777 a-a-a-----------------
i Delphinapterus_leucas.KZ290064.1                      C 0 I 4
s Desmodus_rotundus.KZ672188.1                           18698870  2 -  18957592 A-A-------------------
i Desmodus_rotundus.KZ672188.1                          C 0 I 8
s Dicerorhinus_sumatrensis.PEKH010003161.1                 322604  2 +    993696 a-a-------------------
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 I 7
s Diceros_bicornis.DicBicMic_scaffold_9545                   3257  2 +    151128 A-A-------------------
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 I 8
s Dinomys_branickii.DinBra_scaffold_1996                   157091  8 +    228994 A-G-A--A---A---A----TA
i Dinomys_branickii.DinBra_scaffold_1996                I 63 I 5
s Dipodomys_ordii.KN672545.1                              3656413  9 +   4240102 A-C-A--A---AA--A----CA
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 28046  9 +     28912 A-C-A--A---AA--A----CA
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Echinops_telfairi.JH980316.1                           22998553  8 -  44670279 a-ata--a---a---c-----c
i Echinops_telfairi.JH980316.1                          I 15 I 7
s Eidolon_helvum.KE772537.1                                 12335  2 +     24177 a-a-------------------
i Eidolon_helvum.KE772537.1                             C 0 I 8
s Elaphurus_davidianus.JRFZ01086400.1                     1491548  7 +   1727528 a-a-t--a---a---a-----a
i Elaphurus_davidianus.JRFZ01086400.1                   I 64 I 4
s Elephantulus_edwardii.JH947210.1                        7816028  2 +  15467074 ----C--A--------------
i Elephantulus_edwardii.JH947210.1                      C 0 I 9
s Ellobius_lutescens.LOEQ01003611.1                        239873  8 -    369425 a-a-a--g---a---aa----a
i Ellobius_lutescens.LOEQ01003611.1                     I 66 C 0
s Ellobius_talpinus.LOJH01090055.1                           6980  8 -      7838 a-a-a--g---a---aa----a
i Ellobius_talpinus.LOJH01090055.1                      I 65 C 0
s Enhydra_lutris.KZ291749.1                              85872263  2 +  99434291 a-a-------------------
i Enhydra_lutris.KZ291749.1                             C 0 I 18
s Eptesicus_fuscus.JH977687.1                             4704245  1 +   6522550 A---------------------
i Eptesicus_fuscus.JH977687.1                           I 15 I 17
s Equus_asinus.JREZ01000062.1                             5853056  2 -   7175178 a-a-------------------
i Equus_asinus.JREZ01000062.1                           C 0 I 17
s Equus_caballus.CM000402.2                              13351560  2 +  41866177 a-a-------------------
i Equus_caballus.CM000402.2                             C 0 I 8
s Equus_przewalskii.ATBW01073585.1                          13049  2 +     92910 a-a-------------------
i Equus_przewalskii.ATBW01073585.1                      C 0 I 8
s Erinaceus_europaeus.JH835290.1                         11534328  7 +  16010500 a-a-a--g---a---a-----a
i Erinaceus_europaeus.JH835290.1                        I 66 I 8
s Erythrocebus_patas.Contig8                             48773970  7 -  48907691 A-A-A--A---A---A-----A
i Erythrocebus_patas.Contig8                            I 2562 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          315118  3 +    330699 A-A-A-----------------
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 I 4
s Eubalaena_japonica.EubJap_flattened_line_7756             61569  3 +     89355 A-A-A-----------------
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 I 4
s Eulemur_albifrons.k141_715837                              5204  7 +     13586 A-A-A--A---A---A-----A
i Eulemur_albifrons.k141_715837                         I 67 C 0
s Eulemur_collaris.k141_311830                               5135  7 -      6809 A-A-A--A---A---A-----A
i Eulemur_collaris.k141_311830                          I 67 C 0
s Eulemur_coronatus.k141_3240342                            11612  7 +     36558 A-A-A--A---A---A-----A
i Eulemur_coronatus.k141_3240342                        I 67 C 0
s Eulemur_flavifrons.k141_903901                             7933  7 +     60246 A-A-A--A---A---A-----A
i Eulemur_flavifrons.k141_903901                        I 67 C 0
s Eulemur_fulvus.k141_653297                                11409  7 +    109717 A-A-A--A---A---A-----A
i Eulemur_fulvus.k141_653297                            I 67 C 0
s Eulemur_macaco.k141_1341545                               15795  7 +     16540 A-A-A--A---A---A-----A
i Eulemur_macaco.k141_1341545                           I 67 C 0
s Eulemur_mongoz.k141_825972                                16070  7 +     27497 A-A-A--A---A---A-----A
i Eulemur_mongoz.k141_825972                            I 67 C 0
s Eulemur_rubriventer.k141_411740                           18527  7 +     26808 A-A-A--A---A---A-----A
i Eulemur_rubriventer.k141_411740                       I 67 C 0
s Eulemur_rufus.k141_1620292                                33265  7 +     46535 A-A-A--A---A---A-----A
i Eulemur_rufus.k141_1620292                            I 67 C 0
s Eulemur_sanfordi.k141_186399                              15989  7 -     29447 A-A-A--A---A---A-----A
i Eulemur_sanfordi.k141_186399                          I 67 C 0
s Felis_catus.CM001386.2                                129893019  2 - 159252932 a-a-------------------
i Felis_catus.CM001386.2                                C 0 I 8
s Felis_catus_fca126.CM031420.1                         129280106  2 - 158578461 a-a-------------------
i Felis_catus_fca126.CM031420.1                         C 0 I 8
s Felis_nigripes.FelNig_flattened_line_8080                 21251  2 +     52776 A-A-------------------
i Felis_nigripes.FelNig_flattened_line_8080             C 0 I 8
s Galago_moholi.ctg555                                     211029  7 -    847004 A-A-A--A---A---A-----A
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           13403  7 -     43889 A-A-A--A---A---A-----A
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          10475  7 +     27357 A-A-A--A---A---A-----A
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               156380  7 +    324696 A-A-A--A---A---A-----G
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    181346  4 -    189561 a-c-a--a--------------
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 61 I 5
s Glis_glis.GliGli_scaffold_79770                           13160  9 -     18683 A-AGA--A---A---A----AA
i Glis_glis.GliGli_scaffold_79770                       I 12 I 5
s Gorilla_beringei.k141_111300                               5447  7 -     14630 A-A-C--A---A---A-----A
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119652546  8 - 195582420 a-a-c-aa---a---a-----a
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   77695  9 +    118900 A-AGA--A---A---A----AA
i Graphiurus_murinus.GraMur_scaffold_4493               I 77 I 2
s Hapalemur_alaotrensis.k141_1280836                         1979  7 +     10286 A-A-A--A---A---A-----A
i Hapalemur_alaotrensis.k141_1280836                    I 67 C 0
s Hapalemur_gilberti.k141_279011                              456  7 -     11661 A-A-A--A---A---A-----A
i Hapalemur_gilberti.k141_279011                        I 67 C 0
s Hapalemur_griseus.k141_1387522                             5785  7 +     56096 A-A-A--A---A---A-----A
i Hapalemur_griseus.k141_1387522                        I 67 C 0
s Hapalemur_meridionalis.k141_186231                        29035  7 -     42470 A-A-A--A---A---A-----A
i Hapalemur_meridionalis.k141_186231                    I 67 C 0
s Hapalemur_occidentalis.k141_797938                        45658  7 -     54384 A-A-A--A---A---A-----A
i Hapalemur_occidentalis.k141_797938                    I 67 C 0
s Helogale_parvula.HelPar_flattened_line_22962              17302  2 +     53719 A-A-------------------
i Helogale_parvula.HelPar_flattened_line_22962          C 0 I 8
s Hemitragus_hylocrius.HemHyl_scaffold_16669                27551 10 -     91191 A-A-A--A---A---A--AAAA
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 I 8
s Heterocephalus_glaber.JH602058.1                        2551183  8 +  31725842 A-G-A--A---A---A----TA
i Heterocephalus_glaber.JH602058.1                      I 40 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               60925  2 +     73687 A-A-------------------
i Heterohyrax_brucei.HetBruBak_scaffold_25354           I 189 I 23
s Hippopotamus_amphibius.HipAmp_scaffold_1308              147196  7 +    277961 A-A-A--A---A---A-----A
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 I 8
s Hipposideros_armiger.JXIK01001085.1                      278472  2 -    477199 A-A-------------------
i Hipposideros_armiger.JXIK01001085.1                   C 0 I 8
s Hipposideros_galeritus.HipGal_scaffold_104691              7617  2 -      9143 A-A-------------------
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 I 8
s Hoolock_leuconedys.ctg79                                      4853  7 -   7690867 A-A-C--A---A---A-----A
i Hoolock_leuconedys.ctg79                                 I 271 I 40
s Hyaena_hyaena.HyaHya_flattened_line_20729                 17372  2 -     67322 A-G-------------------
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 I 8
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19068  8 -    119109 A-G-A--A---A---A----TA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              5278  7 +      5897 A-A-C--A---A---A-----A
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_1878600                               171  7 -      1230 A-A-C--A---A---A-----A
i Hylobates_agilis.k141_1878600                         I 34 C 0
s Hylobates_klossii.k141_285563                               323  7 +      1026 A-A-C--A---A---A-----A
i Hylobates_klossii.k141_285563                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14624824  7 -  25970782 A-A-C--A---A---A-----A
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            2080  7 -      2977 A-A-C--A---A---A-----A
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             33983  7 -     60944 A-A-C--A---A---A-----A
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     6244  8 +     22540 C-T-A--A---A---A----TA
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7125946  9 +  13083262 a-aga--a---a---aa----a
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_5141390                                    497  7 -      3181 A-A-A--A---A---A-----A
i Indri_indri.k141_5141390                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               9107  3 +     17520 A-A-A-----------------
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 I 4
s Jaculus_jaculus.JH725517.1                              8565985  8 +  11848649 a-a-g--a---a---ta----a
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               23719  3 +     37189 A-A-A-----------------
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 I 4
s Lagothrix_lagothricha.k141_12968                          50336  9 -    147782 A-A-AA-A---AA--A-----A
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   114331  1 -    115756 A---------------------
i Lasiurus_borealis.LasBor_scaffold_5102                I 15 I 5
s Lemur_catta.scaffold_1                                258407341  7 - 285822530 A-A-A--A---A---A-----a
i Lemur_catta.scaffold_1                                I 67 C 0
s Lepilemur_ankaranensis.k141_884009                        24085  8 +     39228 AAA-A--A---A---A-----A
i Lepilemur_ankaranensis.k141_884009                    I 62 C 0
s Lepilemur_dorsalis.k141_134267                            53469  8 +     63517 AAA-A--A---A---A-----A
i Lepilemur_dorsalis.k141_134267                        I 62 C 0
s Lepilemur_ruficaudatus.k141_617879                        78730  8 +    116806 AAA-A--A---A---A-----A
i Lepilemur_ruficaudatus.k141_617879                    I 62 C 0
s Lepilemur_septentrionalis.k141_578524                     31724  8 -     33031 AAA-A--A---A---A-----A
i Lepilemur_septentrionalis.k141_578524                 I 62 C 0
s Leptonychotes_weddellii.KB714749.1                      3086067  2 -   3498232 a-a-------------------
i Leptonychotes_weddellii.KB714749.1                    C 0 I 13
s Lepus_americanus.LepAme_scaffold_62849                    13349  7 +     22452 A-A-A--A---A---A-----A
i Lepus_americanus.LepAme_scaffold_62849                C 0 I 4
s Lipotes_vexillifer.KE558548.1                            136063  3 +   3060487 a-a-a-----------------
i Lipotes_vexillifer.KE558548.1                         C 0 I 4
s Lophocebus_aterrimus.ctg55                             19248481  7 +  19376315 A-A-A--A---A---A-----C
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           10779  7 +     84689 A-A-A--A---A---A-----A
i Loris_lydekkerianus.k141_550999                       I 58 I 1
s Loris_tardigradus.ctg97                                 3778529  7 +   6799190 A-A-A--A---A---A-----A
i Loris_tardigradus.ctg97                               I 58 I 1
s Loxodonta_africana.GL010040.1                          20594328  2 -  62548349 a-a-------------------
i Loxodonta_africana.GL010040.1                         C 0 I 4
s Lycaon_pictus.CM007556.1                               11088217  2 +  39895028 a-a-------------------
i Lycaon_pictus.CM007556.1                              I 50 I 24
s Macaca_arctoides.k141_2201161                             20217  7 +     74745 A-A-A--A---A---A-----A
i Macaca_arctoides.k141_2201161                         C 0 I 6
s Macaca_assamensis.Contig65                             12706673  7 +  12821369 A-A-A--A---A---A-----A
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                2315  7 -      3136 A-A-A--A---A---A-----A
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           47133  7 +     63263 A-A-A--A---A---A-----A
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                 1838  7 -      2568 A-A-A--A---A---A-----A
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 2423  7 -      7381 A-A-A--A---A---A-----A
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  45640  7 -     79256 A-A-A--A---A---A-----A
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196035747  7 + 196197964 a-a-a--a---a---a-----a
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11445917  7 +  11645122 a-a-a--a---a---a-----a
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   4587  7 -     46448 A-A-A--A---A---A-----A
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                2261  7 -     13212 A-A-A--A---A---A-----A
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 15940  7 -     55006 A-A-A--A---A---A-----A
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43841056  7 +  43892939 A-A-A--A---A---A-----A
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               17226  7 -     24607 A-A-A--A---A---A-----A
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               4592  7 -     27140 A-A-A--A---A---A-----A
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                701675  2 +    802869 A-A-------------------
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 I 8
s Mandrillus_leucophaeus.scaffold125                     43437641  7 -  43563597 A-A-A--A---A---A-----C
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4450461  7 -   4543643 A-A-A--A---A---A-----C
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            145708  2 +    252755 a-a-------------------
i Manis_javanica.JSZB01003966.1                         I 17 I 9
s Manis_pentadactyla.KN017078.1                             35785  2 +     58827 a-a-------------------
i Manis_pentadactyla.KN017078.1                         I 17 I 11
s Marmota_marmota.CZRN01000005.1                         36873784  9 +  64221397 a-aga--a---a---aa----a
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       64504  2 -    234502 A-A-------------------
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 I 8
s Mellivora_capensis.MelCap_flattened_line_15433             1073  2 -     87323 A-A-------------------
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 I 20
s Meriones_unguiculatus.MerUng_scaffold_52233               12821  8 +     15977 A-A-G--A---A---A----AA
i Meriones_unguiculatus.MerUng_scaffold_52233           I 67 C 0
s Mesocricetus_auratus.KB708139.1                         1047033  8 -  26018355 a-a-g--g---a---aa----a
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_227248                    397  3 -      1377 A-A-A-----------------
i Mesoplodon_bidens.MesBid_scaffold_227248              C 0 I 4
s Microcebus_murinus.CM007691.1                          16510358  7 +  47401472 a-g-a--a---a---a-----a
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  34573  7 -     48017 T-A-A--A---A---C-----A
i Microgale_talazaci.MicTal_scaffold_34660              I 83 I 14
s Micronycteris_hirsuta.MicHir_scaffold_37978               22778  1 -     32043 ---------------------A
i Micronycteris_hirsuta.MicHir_scaffold_37978           I 2 I 7
s Microtus_ochrogaster.CM001673.1                        22820171  8 -  98408828 A-A-G--T---C---A----CA
i Microtus_ochrogaster.CM001673.1                       I 65 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8209771  2 +  10048721 A-A-------------------
i Miniopterus_natalensis.LDJU01000022.1                 C 0 I 8
s Miniopterus_schreibersii.MinSch_scaffold_24116            34425  2 +     45743 A-A-------------------
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 I 8
s Miopithecus_ogouensis.k141_2935907                         2189  8 +     29742 A-AAA--A---A---A-----A
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        11581  2 -    104932 A-A-------------------
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 I 9
s Mirza_zaza.k141_226143                                     5746  7 +      8497 A-G-A--A---A---A-----A
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 146492  3 +    154973 A-A-A-----------------
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 I 4
s Mormoops_blainvillei.MorMeg_scaffold_2952                161299  2 +    265003 A-A-------------------
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 I 8
s Moschus_moschiferus.MosMos_scaffold_78805                  1573 10 -     19904 A-A-A--A---A---A--AAAA
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 I 4
s Mungos_mungo.MunMun_flattened_line_8729                  144996  2 -    168139 A-A-------------------
i Mungos_mungo.MunMun_flattened_line_8729               I 12 I 8
s Murina_feae.MurFea_scaffold_2254                          19615  1 -    100666 A---------------------
i Murina_feae.MurFea_scaffold_2254                      I 15 I 5
s Mus_caroli.LT608236.1                                  70766666  8 +  92629107 t-a-g--g---a---aa----a
i Mus_caroli.LT608236.1                                 I 64 C 0
s Mus_musculus.chr16                                     75489726  8 +  98207768 t-a-g--g---a---aa----a
i Mus_musculus.chr16                                    I 64 C 0
s Mus_pahari.LT608305.1                                  67555959  8 +  89017189 T-A-G--G---A---A----AA
i Mus_pahari.LT608305.1                                 I 66 C 0
s Mus_spretus.CM004110.1                                 74330902  8 +  97876770 t-a-g--g---a---aa----a
i Mus_spretus.CM004110.1                                I 64 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             11929  9 +     98495 A-AAA--A---A---A----AA
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 12 C 0
s Mustela_putorius.JH417978.1                             4424439  2 -  28371801 a-a-------------------
i Mustela_putorius.JH417978.1                           C 0 I 23
s Myocastor_coypus.MyoCoy_scaffold_3653                     90084  8 -    117718 A-G-A--A---A---A----CA
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 44 C 0
s Myotis_brandtii.KE161952.1                               967924  1 +   8389877 A---------------------
i Myotis_brandtii.KE161952.1                            I 15 I 5
s Myotis_davidii.KB114863.1                               5019601  1 +   6462685 A---------------------
i Myotis_davidii.KB114863.1                             I 15 I 5
s Myotis_lucifugus.GL429887.1                             3465506  1 -   3747815 A---------------------
i Myotis_lucifugus.GL429887.1                           I 15 I 5
s Myotis_myotis.MyoMyo_scaffold_6123                        10719  1 +     66751 A---------------------
i Myotis_myotis.MyoMyo_scaffold_6123                    I 15 I 5
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             5117  2 -      8794 A-A-------------------
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        I 49 I 18
s Nannospalax_galili.KL201303.1                            118774  8 +    362372 A-A-G--A---A---A----AA
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               8696  7 +     48152 A-A-A--A---A---A-----A
i Nasalis_larvatus.k141_153429                          I 69 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4484973  2 -  14209539 a-a-------------------
i Neomonachus_schauinslandi.NINY01007774.1              C 0 I 8
s Neophocaena_asiaeorientalis.KZ688543.1                  3951104  3 -   4490290 a-a-a-----------------
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 I 4
s Noctilio_leporinus.NocLep_scaffold_12062                  49386  2 +     94413 A-A-------------------
i Noctilio_leporinus.NocLep_scaffold_12062              I 56 I 9
s Nomascus_annamensis.k141_720788                              78  7 -      1065 A-A-C--A---A---A-----A
i Nomascus_annamensis.k141_720788                       n 7 I 51
s Nomascus_concolor.k141_226614                              1382  7 -      5092 A-A-C--A---A---A-----A
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_39679                              353  7 -     17937 A-A-C--A---A---A-----A
i Nomascus_gabriellae.k141_39679                        I 131 I 40
s Nomascus_siki_b.tarseq_80                             25100  7 -  18771707 A-A-C--A---A---A-----A
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  2803  7 +      4512 A-A-C--A---A---A-----A
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                31018  2 +   3668941 a-a-------------------
i Nyctereutes_procyonoides.CAJHUB010000786.1            I 50 I 24
s Nycticebus_bengalensis.LG16                            65567220  7 -  95554990 A-A-A--A---A---A-----A
i Nycticebus_bengalensis.LG16                           I 58 I 1
s Nycticebus_coucang.k141_2051882                            3946  7 +      6470 A-A-A--A---A---A-----A
i Nycticebus_coucang.k141_2051882                       I 58 I 1
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65669555  7 +  89412551 A-A-A--A---A---A-----A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     I 58 I 1
s Ochotona_princeps.JH802095.1                            4996097  7 -  23139505 a-a-a--g---a---a-----a
i Ochotona_princeps.JH802095.1                          C 0 I 4
s Octodon_degus.JH651621.1                                3685641  8 +  10294119 T-G-A--A---A---A----Ca
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             679640  2 -   3126709 a-a-------------------
i Odobenus_rosmarus.KB229369.1                          C 0 I 8
s Odocoileus_virginianus.KZ101650.1                       1079780  7 +   1425656 a-a-a--a---a---a-----a
i Odocoileus_virginianus.KZ101650.1                     C 0 I 4
s Okapia_johnstoni.LVCL01S0017931.1                         37077  2 +     78940 ----A--A--------------
i Okapia_johnstoni.LVCL01S0017931.1                     I 61 I 5
s Ondatra_zibethicus.OndZib_scaffold_6821                  125425  8 +    145789 A-A-G--G---A---A----AA
i Ondatra_zibethicus.OndZib_scaffold_6821               I 66 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  37222  3 +     62360 C-A-G-----------------
i Onychomys_torridus.OnyTor_scaffold_12578              I 65 C 0
s Orcinus_orca.KB316965.1                                 7224789  3 -   7562323 a-a-a-----------------
i Orcinus_orca.KB316965.1                               C 0 I 4
s Orycteropus_afer.OryAfe_flattened_line_13509              57612  7 -     66828 C-A-G--A---A---A-----A
i Orycteropus_afer.OryAfe_flattened_line_13509          I 10 I 5
s Oryctolagus_cuniculus.CM000803.1                      141876383  7 + 163896628 A-A-A--A---A---A-----A
i Oryctolagus_cuniculus.CM000803.1                      C 0 I 4
s Otocyon_megalotis.JAEUCK010005121.1                      308303  2 -    505867 a-a-------------------
i Otocyon_megalotis.JAEUCK010005121.1                   I 66 I 24
s Otolemur_crassicaudatus.k141_505435                         842  7 -     53940 A-A-A--A---A---A-----A
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18008822  7 -  38779656 a-a-a--a---a---a-----a
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134077346 10 - 275406953 a-a-a--a---a---aaaa--a
i Ovis_aries.CM001582.2                                 C 0 I 6
s Ovis_canadensis.OviCan_scaffold_6251                      78561 10 +    140051 A-A-A--A---A---A--AAAA
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 I 4
s Pan_paniscus.CM003386.1                               127574813  7 - 205426864 a-a-c--a---a---a-----a
i Pan_paniscus.CM003386.1                               C 0 I 40
s Pan_troglodytes.CM009241.2                            120151967  7 - 196562556 a-a-c--a---a---a-----a
i Pan_troglodytes.CM009241.2                            C 0 I 40
s Panthera_onca.PanOnc_flattened_line_1615                  34412  2 +    295523 A-A-------------------
i Panthera_onca.PanOnc_flattened_line_1615              C 0 I 8
s Panthera_pardus.KV860323.1                              3638146  2 +  18214204 a-a-------------------
i Panthera_pardus.KV860323.1                            C 0 I 8
s Panthera_tigris.KE721879.1                              5027821  2 -   6340057 a-a-------------------
i Panthera_tigris.KE721879.1                            C 0 I 8
s Pantholops_hodgsonii.KE114631.1                         1066197 12 -   1292953 a-a-a--a---t---aaaaaaa
i Pantholops_hodgsonii.KE114631.1                       C 0 I 14
s Papio_anubis.CM001492.2                               188156428  7 - 188283584 a-a-a--a---a---a-----c
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             4745  7 +      5367 A-A-A--A---A---A-----C
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47513813  7 +  47705337 A-A-A--A---A---A-----C
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 67789  7 -    104429 A-A-A--A---A---A-----C
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    6325  7 +     14967 A-A-A--A---A---A-----C
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 2184  7 -      7628 A-A-A--A---A---A-----C
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    115874  2 -    135482 A-A-------------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 I 8
s Perodicticus_ibeanus.k141_117958                           5533  7 -     23713 A-A-A--A---A---A-----A
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            24846  7 -     27972 A-A-A--A---A---A-----A
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      44677  9 -     45160 A-C-T--A---AA--A----CA
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4950461  8 -   8017169 t-a-g--a---a---aa----a
i Peromyscus_maniculatus.KI615518.1                     I 65 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    12534  8 -     36578 A-G-A--A---A---A----CA
i Petromus_typicus.PetTyp_scaffold_33007                I 14 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            121394  3 -    122454 A-A-A-----------------
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 I 4
s Piliocolobus_badius.k141_1987485                           2211  7 -      5908 A-A-A--A---A---A-----A
i Piliocolobus_badius.k141_1987485                      I 69 C 0
s Piliocolobus_gordonorum.k141_1270531                       2835  7 -     17985 A-A-A--A---A---A-----A
i Piliocolobus_gordonorum.k141_1270531                  I 69 C 0
s Piliocolobus_kirkii.k141_929665                            2202  7 +      7694 A-A-A--A---A---A-----A
i Piliocolobus_kirkii.k141_929665                       I 69 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26740680  7 +  26888534 a-a-a--a---a---a-----a
i Piliocolobus_tephrosceles.PDMG02000036.1              I 69 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            97541  1 +    112873 A---------------------
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        I 37 I 5
s Pithecia_albicans.k141_991845                             43943  8 -     61926 A-A-A--A---AA--A-----G
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        25328  8 +     78826 A-A-A--A---AA--A-----G
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              9375  8 -     15800 A-A-A--A---AA--A-----G
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        12574  8 -     16101 A-A-A--A---AA--A-----G
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          5802  8 +      9673 A-A-A--A---AA--A-----G
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13474802  8 -  19735023 A-A-A--A---AA--A-----G
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           13705  8 -     31692 A-A-A--A---AA--A-----G
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           5480  3 +     21690 A-A-A-----------------
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 I 4
s Plecturocebus_bernhardi.k141_959214                       23044  9 +     44506 A-AAA--A---AA--T-----A
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        23256  9 +     67491 A-AAA--A---AA--T-----A
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      13496  9 -     98129 A-AAA--A---AA--T-----A
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     23096  9 +    147771 A-AAA--A---AA--A-----A
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        23351 11 -     23762 A-AAA--A---AAAAA-----A
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          3815  9 -     55515 A-AAA--A---AA--T-----A
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         23169  9 +    152463 A-AAA--A---AA--T-----A
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                        886  9 -    119457 A-AAA--A---AA--T-----A
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         12892  9 +    134592 A-AAA--A---AA--T-----A
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          23479  9 -     75465 A-AAA--A---AA--T-----A
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              187333  7 -    373494 a-a-c--a---a---a-----a
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19807981  7 +  19899266 A-A-C--A---A---A-----A
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               5944  7 -     15069 A-A-A--A---A---A-----A
i Presbytis_comata.k141_672698                          I 69 C 0
s Presbytis_mitrata.k141_860013                              6074  7 +     14865 A-A-A--A---A---A-----A
i Presbytis_mitrata.k141_860013                         I 69 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                2037  2 -      9567 A-A-------------------
i Procavia_capensis.ProCapCap_scaffold_149274           I 210 I 23
s Prolemur_simus.MPIZ01000048.1                           6848720  7 +  12164890 a-a-a--a---a---a-----a
i Prolemur_simus.MPIZ01000048.1                         I 67 C 0
s Propithecus_coquerelli.NW_012147863.1                     17019  7 -     30946 a-a-a--a---a---a-----a
i Propithecus_coquerelli.NW_012147863.1                 I 664 C 0
s Propithecus_coronatus.k141_1353159                         3781  7 +     11805 A-G-A--A---A---A-----A
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           43119  7 +     52369 A-A-A--A---A---A-----A
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         35506  7 -     44753 A-A-A--A---A---A-----A
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            17430  7 +     27322 A-A-A--A---A---A-----A
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       17066  7 -     53241 A-A-A--A---A---A-----A
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         39330  7 -     48185 A-A-A--A---A---A-----A
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           34369  8 +     77221 a-a-g--a---a---aa----a
i Psammomys_obesus.NESX01026517.1                       I 67 C 0
s Pteronotus_parnellii.KE867983.1                            3944  2 -     27784 A-A-------------------
i Pteronotus_parnellii.KE867983.1                       C 0 I 8
s Pteronura_brasiliensis.PteBra_flattened_line_1343        246748  2 -    344369 A-A-------------------
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 I 23
s Pteropus_alecto.KB031157.1                             13246066  2 -  17261082 a-a-------------------
i Pteropus_alecto.KB031157.1                            I 14 I 8
s Pteropus_vampyrus.KN525959.1                             604017  2 -   3946241 a-a-------------------
i Pteropus_vampyrus.KN525959.1                          I 14 I 8
s Puma_concolor.QAVW01000427.1                          131534399  2 - 161321710 a-a-------------------
i Puma_concolor.QAVW01000427.1                          C 0 I 8
s Pygathrix_cinerea.k141_374971                             30062  7 +     56732 A-A-A--A---A---A-----A
i Pygathrix_cinerea.k141_374971                         I 69 C 0
s Pygathrix_nigripes_b.ctg79                                 6806550  7 +   6970761 A-A-A--A---A---A-----A
i Pygathrix_nigripes_b.ctg79                               I 69 C 0
s Pygathrix_nigripes_a.k141_101123                             5941  7 +     18040 A-A-A--A---A---A-----A
i Pygathrix_nigripes_a.k141_101123                        I 69 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                15857  7 +     68503 A-A-A--A---A---A-----A
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 I 6
s Rattus_norvegicus.chr11                                13915668  8 +  90463843 A-A-G--A---A---A----TA
i Rattus_norvegicus.chr11                               I 62 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1787893  2 +   2252614 A-A-------------------
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 I 8
s Rhinopithecus_bieti.k119_554384                             353  7 -     17045 A-A-A--A---A---A-----A
i Rhinopithecus_bieti.k119_554384                       I 69 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206377831  7 - 206558726 a-a-a--a---a---a-----a
i Rhinopithecus_roxellana.NC_044549.1                   I 69 I 6
s Rhinopithecus_strykeri.ctg4                            44856744  7 -  45163003 A-A-A--A---A---A-----A
i Rhinopithecus_strykeri.ctg4                           I 69 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                19406  2 +    109198 A-A-------------------
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 I 8
s Saiga_tatarica.SaiTat_scaffold_82192                       8024 12 +     12214 A-A-A--A---C---AAAAAAA
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 I 13
s Sapajus_macrocephalus.k141_966464                         20858  6 -     62485 ---------------A-AAAAA
i Sapajus_macrocephalus.k141_966464                     I 6 C 0
s Saimiri_boliviensis.NW_024100938.1                     15672907  5 -  43202129 a-a-a-ga--------------
i Saimiri_boliviensis.NW_024100938.1                    C 0 I 3
s Saimiri_cassiquiarensis.k141_808270                        4820  5 +     34089 A-A-A-GA--------------
i Saimiri_cassiquiarensis.k141_808270                   C 0 I 3
s Saimiri_macrodon.k141_2087127                              4762  5 -     60842 A-A-A-GA--------------
i Saimiri_macrodon.k141_2087127                         C 0 I 3
s Saimiri_oerstedii.k141_841116                              4855  5 +     67014 A-A-A-GA--------------
i Saimiri_oerstedii.k141_841116                         C 0 I 3
s Saimiri_sciureus.k141_1947592                              4833  5 +     60816 A-A-A-GA--------------
i Saimiri_sciureus.k141_1947592                         C 0 I 3
s Saimiri_ustus.k141_1282476                                 4770  5 -     76454 A-A-A-GA--------------
i Saimiri_ustus.k141_1282476                            C 0 I 3
s Sapajus_apella.ctg10                                   17341493  5 -  30362882 A-A-AA-A--------------
i Sapajus_apella.ctg10                                  C 0 I 5
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   32384  7 -    114521 A-A-A--A---A---A-----A
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 I 25
s Semnopithecus_entellus.k141_1572367                        3553  8 +     15331 A-AAA--A---A---A-----A
i Semnopithecus_entellus.k141_1572367                   I 67 C 0
s Semnopithecus_hypoleucos.k141_761524                       8948  7 +     20762 A-A-A--A---A---A-----A
i Semnopithecus_hypoleucos.k141_761524                  I 67 I 11
s Semnopithecus_johnii.k141_785014                         118951  7 +    130994 A-A-A--A---A---A-----A
i Semnopithecus_johnii.k141_785014                      I 67 I 7
s Semnopithecus_priam.k141_410937                           37737  7 +     46263 A-A-A--A---A---A-----A
i Semnopithecus_priam.k141_410937                       I 67 I 7
s Semnopithecus_schistaceus.k141_387461                     30855  8 +     42640 A-AAA--A---A---A-----A
i Semnopithecus_schistaceus.k141_387461                 I 67 C 0
s Semnopithecus_vetulus.k141_1143185                        13896  7 +     30600 A-A-A--A---A---A-----A
i Semnopithecus_vetulus.k141_1143185                    I 67 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  100405  8 -    120886 A-A-G--G---G---A----CA
i Sigmodon_hispidus.SigHis_scaffold_11332               I 65 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            18947  7 +    739146 A-A-G--G---A---A-----A
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 I 9
s Spermophilus_dauricus.KZ294190.1                        2239862  9 +   2842873 a-aga--a---a---aa----a
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             234871  2 -    276980 A-A-------------------
i Spilogale_gracilis.SpiGra_flattened_line_905          I 17 I 22
s Suricata_suricatta.SurSur_flattened_line_20339            27658  2 +     62062 A-A-------------------
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 I 8
s Sus_scrofa.CM000824.4                                 189271936  7 + 218635234 a-a-g--g---a---a-----a
i Sus_scrofa.CM000824.4                                 C 0 I 13
s Symphalangus_syndactylus.tarseq_24                        15085  7 -  13920577 A-A-C--A---A---A-----A
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                 328  2 +     20549 A-A-------------------
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 I 7
s Tamandua_tetradactyla.TamTet_scaffold_26877               14780  2 +     45698 A-A-------------------
i Tamandua_tetradactyla.TamTet_scaffold_26877           I 49 I 18
s Tapirus_indicus.TapInd_scaffold_176                      807210  2 +   1148477 A-A-------------------
i Tapirus_indicus.TapInd_scaffold_176                   C 0 I 2
s Tapirus_terrestris.TapTer_scaffold_14939                  57906  2 +     99546 A-A-------------------
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 I 7
s Tarsius_lariang.k141_609102                               26625  9 +     42269 AAA-A--A---AA--A-----A
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               59941  9 +     65473 AAA-A--A---AA--A-----A
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194007950  7 - 194193292 a-a-a--a---a---a-----c
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  5599  2 +      6782 A-A-------------------
i Tolypeutes_matacus.TolMat_scaffold_269431             I 45 I 18
s Tonatia_saurophila.TonSau_scaffold_3334                  135936  2 -    259118 A-A-------------------
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 I 8
s Trachypithecus_auratus.k141_738098                        27053  7 +     38948 A-A-A--A---A---A-----A
i Trachypithecus_auratus.k141_738098                    I 67 C 0
s Trachypithecus_crepusculus.k141_1588528                   20785  7 -     32910 A-A-A--A---A---A-----A
i Trachypithecus_crepusculus.k141_1588528               I 67 C 0
s Trachypithecus_cristatus.k141_1011511                      2171  7 -     12939 A-A-A--A---A---A-----A
i Trachypithecus_cristatus.k141_1011511                 I 67 C 0
s Trachypithecus_francoisi.k141_768164                       2107  7 -     14244 A-A-A--A---A---A-----A
i Trachypithecus_francoisi.k141_768164                  I 67 I 7
s Trachypithecus_geei.k141_670367                           43506  7 -     54611 A-A-A--A---A---A-----A
i Trachypithecus_geei.k141_670367                       I 67 I 7
s Trachypithecus_germaini.k141_868450                        1310  7 -     11566 A-A-A--A---A---A-----A
i Trachypithecus_germaini.k141_868450                   I 67 I 4
s Trachypithecus_hatinhensis.k141_504423                     3486  7 -     15592 A-A-A--A---A---A-----A
i Trachypithecus_hatinhensis.k141_504423                I 67 I 7
s Trachypithecus_laotum.k141_760702                          2141  7 +     14371 A-A-A--A---A---A-----A
i Trachypithecus_laotum.k141_760702                     I 67 C 0
s Trachypithecus_leucocephalus.k141_381681                    423  7 +     12481 A-A-A--A---A---A-----A
i Trachypithecus_leucocephalus.k141_381681              I 67 I 7
s Trachypithecus_melamera.k141_699241                         303  7 -     24393 A-A-A--A---A---A-----A
i Trachypithecus_melamera.k141_699241                   I 67 C 0
s Trachypithecus_obscurus.k141_1115109                       5544  7 -     28054 A-A-A--A---A---A-----A
i Trachypithecus_obscurus.k141_1115109                  I 67 C 0
s Trachypithecus_phayrei.ctg3                            44660344  7 -  44834318 A-A-A--A---A---A-----A
i Trachypithecus_phayrei.ctg3                           I 67 C 0
s Trachypithecus_pileatus.k141_1022309                       2651  8 +     13828 A-AAA--A---A---A-----A
i Trachypithecus_pileatus.k141_1022309                  I 67 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   5251  5 +     90398 A-A-A--A---A----------
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 I 5
s Tupaia_chinensis.KB320831.1                             2793004  5 -   3938065 t-a-a--g---a----------
i Tupaia_chinensis.KB320831.1                           C 0 I 1
s Tupaia_tana.TupTan_flattened_line_68454                    5207  5 +     13056 T-A-A--A---A----------
i Tupaia_tana.TupTan_flattened_line_68454               C 0 I 1
s Tursiops_truncatus.MRVK01000923.1                      69313504  3 -  96451834 a-a-a-----------------
i Tursiops_truncatus.MRVK01000923.1                     C 0 I 5
s Uropsilus_gracilis.UroGra_scaffold_69449                   1418  7 +     10241 A-A-A--G---A---A-----A
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 I 8
s Ursus_maritimus.KK498671.1                              6514885  2 +  28682327 a-a-------------------
i Ursus_maritimus.KK498671.1                            C 0 I 18
s Varecia_rubra.k141_432109                                  5420  7 -     20643 A-A-A--A---A---A-----A
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             24961  7 -     33872 A-A-A--A---A---A-----A
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1524748  2 -   2331223 a-a-------------------
i Vicugna_pacos.KN269600.1                              C 0 I 6
s Vulpes_lagopus.VulLag_flattened_line_2045                138398  2 -    281493 A-A-------------------
i Vulpes_lagopus.VulLag_flattened_line_2045             I 50 I 24
s Xerus_inauris.XerIna_scaffold_7898                       126977  9 -    134049 A-AGA--A---A---A----AA
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        214366  2 -    227762 a-a-------------------
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 I 9
s Zapus_hudsonius.ZapHud_scaffold_64392                     15082  8 -     20485 G-A-G--A---A---A----AA
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           7004  3 -      8775 A-A-A-----------------
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 I 4
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             38964  0 -     47444 C
e Sorex_araneus.JH798170.1                               17750754 3364 -  27805282 I
e Trichechus_manatus.JH594618.1                          16084982 22 +  31416278 I
e Crocidura_indochinensis.CroInd_scaffold_88140              2224 41 +     11655 I
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I
e Dolichotis_patagonum.DolPat_scaffold_14102                36200  0 -     73477 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               11937 40 +    209709 C----------AG-A-A-GA--A-A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
s Acinonyx_jubatus.LLWD01000356.1                         2034070 41 +   3721120 t----------gg-a-a-g---g-a--a----aa---a-----a-------a-t-aaaccttat-----aaC-AAGGCA------------GAA------------------CTT-TG
i Acinonyx_jubatus.LLWD01000356.1                       I 8 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    112705 40 -    189883 T----------GA-G-A-A---G-A--AA---A----A-----T-------T-A-AGACCA-AT-----CAC-AAAGAT------------GAA------------------CTA-TG
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10657413 40 +  23371972 t----------gg-a-a-g---a-a--a----aa---a-----a-------a-t-agaccttaT-----AAG-AAGGCA------------TA-------------------CTA-TA
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 14 C 0
s Ailurus_fulgens.LNAC01000003.1                          7094756 44 -  16596857 t----------gg-a-a-g---g-a--a----aaaaga-----a-------a-t-aaaccttaT-----AAA-AAGGCA------------TAA------------------CTG-TG
i Ailurus_fulgens.LNAC01000003.1                        I 12 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   16992 30 -     22067 --------------------------------A----A-----A-------T-G-AAACCA-AT-----AAC-GAGGGA------------GAA------------------CTA-TG
i Allactaga_bullata.AllBul_scaffold_70162               I 9 C 0
s Allenopithecus_nigroviridis.k141_2469532                   1448 39 -     60446 T----------TG-A-A-G---A-A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         2168 39 -     29318 T----------TG-A-A-G---A-A--A----A----A-----A-------T-G-ACACCC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         1103 39 +     38766 T----------TG-A-A-G---A-A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          2062 39 -     80423 T----------TG-A-A-G---A-A--A----A----A-----A-------T-G-ACACCC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            10365 40 -     18050 T----------GG-A-A-GG--A-A--T----A----A-----A-------T-G-AAACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Alouatta_belzebul.k141_1818029                        I 2 C 0
s Alouatta_caraya.k141_5460                                 11458 40 -     11521 T----------GG-A-A-GG--A-A--T----A----A-----A-------T-G-AAACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Alouatta_caraya.k141_5460                             I 2 C 0
s Alouatta_discolor.k141_811576                             11038 40 -     21359 T----------GG-A-A-GG--A-A--T----A----A-----A-------T-G-AAACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Alouatta_discolor.k141_811576                         I 2 C 0
s Alouatta_juara.k141_1244470                                 657 40 +      2129 T----------GG-A-A-GG--A-A--T----A----A-----A-------T-G-AAACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Alouatta_juara.k141_1244470                           I 2 C 0
s Alouatta_macconnelli.k141_1331706                         10338 40 -     10438 T----------AG-A-A-GG--A-A--T----A----A-----A-------T-G-AAACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Alouatta_macconnelli.k141_1331706                     I 2 C 0
s Alouatta_nigerrima.k141_3537692                              90 40 +      1660 T----------GG-A-A-GG--A-A--T----A----A-----A-------T-G-AAACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Alouatta_nigerrima.k141_3537692                       I 2 C 0
s Alouatta_palliata.k141_1316127                            10276 40 +     10410 T----------GG-A-A-GG--A-A--T----A----A-----A-------T-G-AAACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Alouatta_palliata.k141_1316127                        I 7 C 0
s Alouatta_puruensis.k141_1284840                            4083 40 -      4927 T----------AG-A-A-GG--A-A--T----A----A-----A-------T-G-AAACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Alouatta_puruensis.k141_1284840                       I 2 C 0
s Alouatta_seniculus.k141_1531728                             222 40 -      1692 T----------GG-A-A-GG--A-A--T----A----A-----A-------T-G-AAACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Alouatta_seniculus.k141_1531728                       I 2 C 0
s Ammotragus_lervia.NIVO01013474.1                        3520211 42 +   4113121 t----------ag-a-a-g---g-a--a--aaa----a-----a------at-a--aaccttct-----AAC-AAGGCA------------GAA------------------CTA-TG
i Ammotragus_lervia.NIVO01013474.1                      I 4 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      390405 40 -    631301 T----------GT-A-A-G---A-G--A----A----A-----A-------A-C-AAACCTTAT-----AAC-AAGGCA------------GAA------------------CTG-TA
i Anoura_caudifer.AnoCau_scaffold_422                   I 9 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            30803 31 +     33004 --------------------------------A----A-----A-A-----T-A--AATTTTAT-----AAC-AAAGCA------------GAA------------------CTA-TG
i Antilocapra_americana.AntAmePen_scaffold_42841        I 14 C 0
s Aotus_azarae.k141_3170768                                 62732 26 +     78111 -----------------------------------------------------G-AAACTC-AT-----AAC-AAGGCA------------AAA------------------CTA-TG
i Aotus_azarae.k141_3170768                             I 8 C 0
s Aotus_griseimembra.k141_3275623                            5674 26 +     22701 -----------------------------------------------------G-AAACTC-AT-----AAC-AAGGCA------------AAA------------------CTA-TG
i Aotus_griseimembra.k141_3275623                       I 9 C 0
s Aotus_nancymaae.KZ196176.1                              5749631 26 +   9889416 -----------------------------------------------------g-aaactc-AT-----Aac-aaggca------------aaa------------------cta-tg
i Aotus_nancymaae.KZ196176.1                            I 8 C 0
s Aotus_trivirgatus.k141_1740727                             6220 26 -    104377 -----------------------------------------------------G-AAATTC-AT-----AAC-AAGGCA------------AAA------------------CTC-TG
i Aotus_trivirgatus.k141_1740727                        I 6 C 0
s Aotus_vociferans.k141_718647                               6222 26 +     23246 -----------------------------------------------------G-AAATTC-AT-----AAC-AAGGCA------------AAA------------------CTC-TG
i Aotus_vociferans.k141_718647                          I 9 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     3800 39 +      5067 T----------AC-A-A-G---G-A--A----A----A-----A-------T-G-AAACTG-AT-----CCC-AAGGCA------------GAA------------------CCC-TT
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        1137 39 +      9265 T----------GA-G-A-A---G-A--A----A----A-----T-------T-G-AAATTC-AA-----AAC-AAGGCA------------GAA------------------CTA-TA
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 8813 40 -     29036 T----------AT-A-A-G---A-G--A----A----A-----A-------A-C-AAACCTTAT-----AAC-AAGGCA------------GAA------------------CTG-TA
i Artibeus_jamaicensis.ArtJam_scaffold_41619            I 8 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9539475 41 +  39197703 G----------GG-A-A-GG--A-A--A----A----A-----A-------T-G-AAACTC-AT-----AACAAAGGCA------------GAA------------------CTA-TG
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             60746 41 +     85812 G----------GG-A-A-GG--A-A--A----A----A-----A-------T-G-AAACTC-AT-----AACAAAGGCA------------GAA------------------CTA-TG
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                11759 41 +     89302 G----------GG-A-A-GG--A-A--A----A----A-----A-------T-G-AAACTC-AT-----AACAAAGGCA------------GAA------------------CTA-TG
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             16262 41 -     58268 G----------GG-A-A-GG--A-A--A----A----A-----A-------T-G-AAACTC-AT-----AACAAAGGCA------------GAA------------------CTA-TG
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             64254 41 +    119057 G----------GG-A-A-GG--A-A--A----A----A-----A-------T-G-AAACTC-AT-----AACAAAGGCA------------GAA------------------CTA-TG
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               6225 41 -     25888 G----------GG-A-A-GA--A-A--A----A----A-----A-------T-G-AAACTC-AT-----AACAAAGGCA------------GAA------------------CTA-TG
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 6871 39 -     16375 T----------GG-A-A-A---G-A--A----A----A-----A-------T-G-AAACTC-AA-----AAC-AAGGCA------------GAA------------------CTA-TG
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                                490 39 +      6337 T----------GG-A-A-A---G-A--A----A----A-----A-------T-G-AAACTC-AA-----AAC-AAGGCA------------GAA------------------CTA-TG
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26380286 41 +  51448160 t----------gg-a-a-g---g-a--a----a----a-----a------aa-t-aaaccttat-----aaC-AAGGCA------------GAA------------------CTA-TG
i Balaenoptera_acutorostrata.KI537095.1                 I 4 C 0
s Balaenoptera_bonaerensis.DF502048.1                        5455 41 -     13118 t----------gg-a-a-g---g-a--a----a----a-----a------aa-t-aaaccttat-----aAC-AAGGCA------------GAA------------------CTA-TG
i Balaenoptera_bonaerensis.DF502048.1                   I 4 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   43279 44 -     72089 T----------AG-A-A-G---G-A--AAAAAA----A-----A-A-----T-A--AACCTTAT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Beatragus_hunteri.BeaHun_scaffold_21644               I 4 C 0
s Bison_bison.KN264915.1                                  6559943 43 +   6870073 t----------gg-a-a-g---g-a--a-aaaa----a-----a------at-a--aaccttat-----aAC-AAGGCA------------GAA------------------CTA-TG
i Bison_bison.KN264915.1                                I 5 C 0
s Bos_indicus.CM003021.1                                138140052 43 - 161108492 t----------gg-a-a-g---g-a--a-aaaa----a-----a------at-a--aaccttat-----aAC-AAGGCA------------GAA------------------CTA-TG
i Bos_indicus.CM003021.1                                I 5 C 0
s Bos_mutus.JH883513.1                                     572591 45 -    998990 t----------gg-a-a-g---g-gaaa-aaaa----a-----a------at-a--aaccttat-----aAC-AAGGCA------------GAA------------------CTA-TG
i Bos_mutus.JH883513.1                                  I 5 C 0
s Bos_taurus.CM000177.6                                 136295785 43 - 158972876 t----------gg-a-a-g---g-a--a-aaaa----a-----a------at-a--aaccttat-----aAC-AAGGCA------------GAA------------------CTA-TG
i Bos_taurus.CM000177.6                                 I 5 C 0
s Bubalus_bubalis.KI419065.1                              1232871 36 -   1914593 ------------------------a--a-aaaa----a-----a------at-a--aaccttac-----aAC-AAGGCA------------GAA------------------CTA-TG
i Bubalus_bubalis.KI419065.1                            I 10 C 0
s Cacajao_ayresi.k141_724503                               114113 40 -    171031 A----------GG-A-A-GG--A-A--A----A----A-----A-------T-G-AAACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Cacajao_ayresi.k141_724503                            I 2 C 0
s Cacajao_calvus.k141_96166                                 13142 40 +    125063 A----------GG-A-A-GG--A-A--A----A----A-----A-------T-G-AAACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Cacajao_calvus.k141_96166                             I 2 C 0
s Cacajao_hosomi.k141_303789                                15185 40 -    216513 A----------GG-A-A-GG--A-A--A----A----A-----A-------T-G-AAACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Cacajao_hosomi.k141_303789                            I 2 C 0
s Cacajao_melanocephalus.k141_1160263                        7728 40 -    134917 A----------GG-A-A-GG--A-A--A----A----A-----A-------T-G-AAACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Cacajao_melanocephalus.k141_1160263                   I 2 C 0
s Camelus_bactrianus.KN276303.1                           3219651 41 -   8989139 t----------gg-a-a-g---g-a--a----a----a-----a------aa-t-aaacttgat-----aaC-AAGGCA------------GAA------------------TTA-TG
i Camelus_bactrianus.KN276303.1                         I 6 C 0
s Camelus_dromedarius.KN271192.1                           397352 41 -  15254737 t----------gg-a-a-g---g-a--a----a----a-----a------aa-t-aaacttgat-----aaC-AAGGCA------------GAA------------------TTA-TG
i Camelus_dromedarius.KN271192.1                        I 6 C 0
s Camelus_ferus.KB016973.1                                2973088 41 +   6889770 t----------gg-a-a-g---g-a--a----a----a-----a------aa-t-aaacttgat-----aaC-AAGGCA------------GAA------------------TTA-TG
i Camelus_ferus.KB016973.1                              I 6 C 0
s CanFam4.chr31                                          11519586 15 +  39901454 -----------------------------------------------------------------------A-AAGGCA------------GAA------------------CTA-TG
i CanFam4.chr31                                         I 24 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   14611 15 +     87036 -----------------------------------------------------------------------A-AAGGCA------------GAA------------------CTA-TG
i Canis_lupus_VD.CanFam_VD_scaffold_16982               I 24 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11266253 15 -  35597290 -----------------------------------------------------------------------a-aaggcA------------GAA------------------CTA-TG
i Canis_lupus_dingo.QKWQ01001993.1                      I 24 C 0
s Canis_lupus_familiaris.chr31                           11088787 15 +  39895921 -----------------------------------------------------------------------a-aaggcA------------GAA------------------CTA-TG
i Canis_lupus_familiaris.chr31                          I 24 C 0
s Canis_lupus_orion.HG994411.1                           16455802 15 -  44759192 -----------------------------------------------------------------------a-aaggcA------------GAA------------------CTA-TG
i Canis_lupus_orion.HG994411.1                          I 24 C 0
s Capra_aegagrus.CM003214.1                              21325287 42 + 157394656 t----------ag-a-a-g---g-a--a--aaa----a-----a------at-a--aaccttct-----AAC-AAGGCA------------GAA------------------CTA-TG
i Capra_aegagrus.CM003214.1                             I 4 C 0
s Capra_hircus.CM004562.1                               135706515 42 - 157403528 t----------ag-a-a-g---g-a--a--aaa----a-----a------at-a--aaccttct-----AAC-AAGGCA------------GAA------------------CTA-TG
i Capra_hircus.CM004562.1                               I 4 C 0
s Carlito_syrichta.NW_007248099.1                          309150 49 +    345090 aaaaaaaaaaggg-a-a-a---g-a--a----a----a-----g-------t-g-aaACTC-AG-----AAA-AAGGCA------------GAA------------------CTG-TG
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               59605 40 +     67245 T----------GT-A-A-G---A-G--A----A----A-----A-------A-C-AAACCTGAT-----ATC-AAGGCA------------GAA------------------CTG-CA
i Carollia_perspicillata.CarPer_scaffold_4436           I 8 C 0
s Castor_canadensis.CasCan_scaffold_47037                   30815 39 +     33760 T----------GG-A-A-G---G-A--A----A----A-----A-------T-A-AAGCCA-AT-----AAG-AAGGCA------------CCA------------------CTA-TC
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   158978 41 -    276539 T----------AG-A-A-G---G-A--A----A----A-----A-A-----A-T-AAACTTTAT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Catagonus_wagneri.CatWag_scaffold_1305                I 10 C 0
s Cavia_aperea.AVPZ01000278.1                            15786686 39 -  24422027 N----------NN-N-N-N---N-N--N----N----N-----N-------N-N-NNNNNN-NN-----NNN-NNNNNN------------NNN------------------NNN-NN
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15798622 39 -  24440124 C----------TA-T-A-A---G-G--A----A----A-----A-------T-A-CAGCTG-GT-----AAC-TAGGCA------------GAA------------------CTC-TG
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       176813 39 +    436027 C----------TA-T-A-A---G-G--A----A----A-----A-------T-A-CAGCTG-GT-----AAC-TAGGCA------------GAA------------------CTC-TG
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18890959 40 -  29618158 T----------GG-A-A-GG--A-A--A----A----A-----A-------T-G-AAACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Cebus_albifrons.Contig22                              I 5 C 0
s Cebus_olivaceus.k141_93739                                 8503 40 -     26817 T----------GG-A-A-GG--A-A--A----A----A-----A-------T-G-AAACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Cebus_olivaceus.k141_93739                            I 5 C 0
s Cebus_unicolor.k141_239009                                12746 40 +     25043 T----------GG-A-A-GG--A-A--A----A----A-----A-------T-G-AAACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Cebus_unicolor.k141_239009                            I 8 C 0
s Cephalopachus_bancanus.k141_702587                         8188 39 +     21754 A----------GG-A-A-A---G-A--A----A----A-----A-------T-G-AAACTC-AG-----AAA-AAGGTA------------GAA------------------CTG-TG
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4363964 42 +   7569818 t----------gg-a-a-g---gaa--a----aa---a-----a-------a-a-caaacttgt-----aaC-AAGGCA------------GAA------------------CTA-TG
i Ceratotherium_simum.JH767818.1                        I 7 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         3721 42 -      9338 T----------GG-A-A-G---GAA--A----A---AA-----A-------A-A-CAAACTTGT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    I 7 C 0
s Cercocebus_atys.KQ010443.1                              6555394 39 +   6739814 t----------ag-a-a-g---a-a--a----a----a-----a-------t-g-acACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      26871 39 +     60454 T----------AG-A-A-G---A-A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          2077 39 -     21101 T----------AG-A-A-G---A-A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         59386 39 -    107033 T----------AG-A-A-G---A-A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        2276 39 -     17608 T----------TG-A-A-G---A-A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          29772 39 +     30494 T----------TG-A-A-G---A-A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          58617 39 -     59240 T----------TG-A-A-G---A-A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          2318 39 +     16677 T----------TG-A-A-G---A-A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           24477 39 +     35983 T----------TG-A-A-G---A-A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11991004 39 +  12117833 T----------TG-A-A-G---A-A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46477763 39 +  46592721 T----------TG-A-A-G---A-A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      41314 39 -     45581 T----------TG-A-A-G---A-A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       2319 39 +     35577 T----------TG-A-A-G---A-A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        2095 39 -     25661 T----------TG-A-A-G---A-A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        2074 39 -     17744 T----------TG-A-A-G---A-A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        21689 39 +     37128 T----------TG-A-A-G---A-A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           2861 26 -      6963 -------------------------------------------------------AAACCCTAT-----AGT-GAGACA------------AAG------------------TTA-TG
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      I 18 C 0
s Cheirogaleus_major.k141_1157592                           59154 39 -     68416 T----------GG-A-A-A---G-A--A----A----A-----A-------T-G-AAACTC-AG-----AAC-AAGGCA------------GAA------------------CTA-TG
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            8199 39 +     13308 T----------GG-A-A-A---G-A--A----A----A-----A-------T-G-AAACTC-AG-----AAC-AAGGCA------------GAA------------------CTA-TG
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             5769 41 -     18223 T----------GG-A-A-GG--AAA--A----A----A-----A-------T-G-AAACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             22789 41 +     25473 T----------GG-A-A-GG--AAA--A----A----A-----A-------T-G-AAACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           41827 41 +     57117 T----------GG-A-A-GG--AAA--A----A----A-----A-------T-G-AAACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          46506 41 +     54541 T----------GG-A-A-GG--AAA--A----A----A-----A-------T-G-AAACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15961829 39 +  43084221 C----------TA-G-C-A---G-G--A----C----A-----A-------T-A-AAGCTG-AT-----AAC-AAAGCA------------GAA------------------CTC-TG
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         71314 40 +    196370 T----------AG-A-A-GG--A-A--A----A----A-----A-------T-G-AAACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          15494 40 +     40510 T----------GG-A-A-GG--A-A--A----A----A-----A-------T-G-AAACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15139209 39 -  15256731 T----------TG-A-A-G---A-A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      34290 39 -     53260 T----------TG-A-A-G---A-A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101144850 39 + 101219884 t----------tg-a-a-g---a-a--a----a----a-----a-------t-g-acACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                16568 26 -     21363 -------------------------------------------------------AAGTCTTAC-----AGT-AAGACA------------GAG------------------CTA-TG
i Choloepus_didactylus.ChoDid_scaffold_36182            I 24 C 0
s Choloepus_hoffmanni.KN194586.1                           761871 26 +    964067 -------------------------------------------------------aagtctTAC-----AGT-AAGACA------------GAG------------------CTA-TG
i Choloepus_hoffmanni.KN194586.1                        I 19 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_1707876              688 12 +       793 g----------aa-g-a-g---g-a--a----a----a-----a--------------------------------------------------------------------------
i Chrysochloris_asiatica.ChrAsi_scaffold_1707876        I 5 I 8
s Colobus_angolensis.KN985967.1                          10886619 39 +  10971483 t----------gg-a-a-g---a-a--a----a----a-----a-------t-g-acaCTT-AT-----AAC-AAGGCA------------GAG------------------CTA-TG
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147664784 39 + 156195979 T----------GG-A-A-G---A-A--A----A----A-----A-------T-G-ACACTT-AT-----AAC-AAGGCA------------GAG------------------CTA-TG
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            16769 39 +     23629 T----------AG-A-A-G---A-A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAG------------------CTA-TG
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60613707 13 +  78930452 ------------------------------------------------------------TTAT-----AAT-CAGACA---------------------------------------
i Condylura_cristata.JH655880.1                         I 8 I 4
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         39791 41 -     40477 T----------GG-A-A-G---G-G-GG----A----A-----A-------G-G-AAACTTTCT-----AAC-AAGGCA------------GAA------------------ATG-CA
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     I 10 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 278664 45 -    399297 G----------TA-G-A-A---G-G--AA---A----A-----T-------T-A-AAACCA-ATCAAATAAC-AAGGAT------------GAA------------------TCA-TG
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53029333 41 +  72327488 t----------ga-g-a-a---g-g--a---aa----g-----t------TT-A-AAACCA-AA-----GAC-AAAGCT------------GAA------------------GTA-TG
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_88140              2265 15 +     11655 -----------------------------------------------------------------------T-AGGGCT------------GAA------------------CTA-GA
i Crocidura_indochinensis.CroInd_scaffold_88140         I 41 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            52105 42 -     70449 T----------AG-A-A-G---G-A--GA---A---AA-----A-------A-T-AAACCTTAT-----TAC-AAGGCA------------GAA------------------CTA-TG
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 8 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  208234 39 -    956709 T----------GG-A-C-A---G-A--A----A----A-----G-------T-A-AAACCG-CC-----GGC-GATGCA------------GCC------------------CTG-CG
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 30818 38 -     67205 T----------TA-T-A-A---G-G--A----G----A-----A-------T-A-AATCTG-AT-----AAC-AGA-CA------------GAA------------------CTC-TG
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                17864 39 +     26546 C----------TA-T-A-A---G-G--A----A----A-----A-------T-A-AAGCTG-GT-----AAC-AAGGCA------------GAA------------------CTC-TG
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             58956 39 -    236241 C----------TA-T-A-A---G-G--A----A----A-----A-------T-A-AAGCTG-GT-----AAC-AAGGCA------------GAA------------------CTC-CG
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          183746 26 -   6883506 -------------------------------------------------------aaaccctAT-----AGT-GAGACA------------AAG------------------TTA-TG
i Dasypus_novemcinctus.JH568778.1                       I 18 C 0
s Daubentonia_madagascariensis.ctg11                     16845006 39 +  31942871 A----------GG-A-A-G---G-A--A----A----A-----A-------T-G-AAACTC-AA-----AAC-AAGGCA------------GAA------------------CTA-TG
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80036909 41 -  96802777 t----------gg-a-a-g---g-a--a----a----a-----a------aa-t-aaaccttat-----aAC-AAGGCA------------GAA------------------CTA-TG
i Delphinapterus_leucas.KZ290064.1                      I 4 C 0
s Desmodus_rotundus.KZ672188.1                           18698880 40 -  18957592 t----------gt-a-a-g---a-g--a----a----a-----a-------a-c-aaaccttAT-----AAC-AAGGCA------------GAA------------------CTG-TA
i Desmodus_rotundus.KZ672188.1                          I 8 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 322613 42 +    993696 t----------gg-a-a-g---gaa--a----aa---a-----a-------a-c-caaacttgt-----AAC-AAGGCA------------GAA------------------CTA-TG
i Dicerorhinus_sumatrensis.PEKH010003161.1              I 7 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   3267 42 +    151128 T----------GG-A-A-G---GAC--A----A---AA-----A-------A-A-CAAACTTGT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Diceros_bicornis.DicBicMic_scaffold_9545              I 8 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   157104 33 +    228994 ----------------------G-G--G----C----A-----A-------T-A-AGGCTG-GT-----ACC-AAGGCA------------GAA------------------CTC-TG
i Dinomys_branickii.DinBra_scaffold_1996                I 5 C 0
s Dipodomys_ordii.KN672545.1                              3656422 31 +   4240102 T----------GG-A-A-G---G-A--G----A----G-----A-------T-A-AAACCA-AT-----AAC-AAAGCA---------------------------------------
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 28055 31 +     28912 T----------GG-A-A-G---G-A--G----A----G-----A-------T-A-AAACCA-AT-----AAC-AAAGCA---------------------------------------
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                36200 39 -     73477 C----------TA-T-A-A---G-G--A----A----A-----A-------T-A-AAGCTG-GT-----AAC-AAGGCC------------GAA------------------TTC-TG
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22998568  9 -  44670279 ----------------------T-A--AACA-A----G-----A--------------------------------------------------------------------------
i Echinops_telfairi.JH980316.1                          I 7 I 9
s Eidolon_helvum.KE772537.1                                 12345 40 +     24177 t----------ga-a-a-g---g-a--a----a----g-----a-------a-c-aaaactTAT-----AAC-AAGGCA------------GAA------------------CTA-TA
i Eidolon_helvum.KE772537.1                             I 8 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1491559 44 +   1727528 t----------ga-a-c-g---g-a--aaaaaa----a-----a------at-a--aaccttat-----aAC-AAGGCA------------GAA------------------CTA-TG
i Elaphurus_davidianus.JRFZ01086400.1                   I 4 C 0
s Elephantulus_edwardii.JH947210.1                        7816039  4 +  15467074 ------------------------------------------------------------------------------T------------ACA------------------------
i Elephantulus_edwardii.JH947210.1                      I 9 C 0
s Ellobius_lutescens.LOEQ01003611.1                        239881 41 -    369425 t----------ga-g-a-a---g-g--g---ta----a-----t------tt-a-aaagca-aa-----gac-aaagat------------gAA------------------GTA-TG
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           6988 41 -      7838 t----------ga-g-a-a---a-g--g---ta----a-----t------tt-a-aaagca-aa-----gat-aaagat------------gaa------------------gta-tg
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85872283 42 +  99434291 t----------gg-a-a-g---g-a--a----aaa--a-----a-------a-t-aaaccttat-----aaG-AAGGCT------------TAA------------------CTA-TG
i Enhydra_lutris.KZ291749.1                             I 18 C 0
s Eptesicus_fuscus.JH977687.1                             4704263 25 +   6522550 ---------------------------------------------------a-c-aaactttat-----aaC-AAGGCA------------G-A------------------CT---A
i Eptesicus_fuscus.JH977687.1                           I 17 C 0
s Equus_asinus.JREZ01000062.1                             5853075 30 -   7175178 -------------------------------------a-----a-------a-t-aaaacttat-----aac-AAGGCA------------GAA------------------CTA-TG
i Equus_asinus.JREZ01000062.1                           I 17 C 0
s Equus_caballus.CM000402.2                              13351570 40 +  41866177 t----------gg-a-a-g---a-a--a----a----a-----a-------a-t-aaaacttat-----aac-AAGGCA------------GAA------------------CTA-TG
i Equus_caballus.CM000402.2                             I 8 C 0
s Equus_przewalskii.ATBW01073585.1                          13059 40 +     92910 t----------gg-a-a-g---a-a--a----a----a-----a-------a-t-aaaacttat-----aac-AAGGCA------------GAA------------------CTA-TG
i Equus_przewalskii.ATBW01073585.1                      I 8 C 0
s Erinaceus_europaeus.JH835290.1                         11534343 43 +  16010500 t----------gg-a-a-g---c-a--a----a----a--aaca-------t-t-AAGACTTAT-----AAC-TGGCCA------------GAG------------------ATA-TG
i Erinaceus_europaeus.JH835290.1                        I 8 C 0
s Erythrocebus_patas.Contig8                             48773977 39 -  48907691 T----------TG-A-A-G---A-A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          315125 41 +    330699 T----------GG-A-A-G---G-A--A----A----A-----A-A-----A-T-AAACCTTAT-----AAG-AAGGCA------------GAA------------------CTA-TG
i Eschrichtius_robustus.EscRob_flattened_line_685       I 4 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             61576 41 +     89355 T----------GG-A-A-G---G-A--A----A----A-----A-A-----A-T-AAACCTTAT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Eubalaena_japonica.EubJap_flattened_line_7756         I 4 C 0
s Eulemur_albifrons.k141_715837                              5211 39 +     13586 T----------GG-A-A-A---G-A--A----A----A-----A-------T-G-AAACTC-AA-----AAC-AAGGCA------------GAA------------------CTA-TG
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               5142 39 -      6809 T----------GG-A-A-A---G-A--A----A----A-----A-------T-G-AAACTC-AA-----AAC-AAGGCA------------GAA------------------CTA-TG
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            11619 39 +     36558 T----------GG-A-A-A---G-A--A----A----A-----A-------T-G-AAACTC-AA-----AAC-AAGGCA------------GAA------------------CTA-TG
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             7940 39 +     60246 T----------GG-A-A-A---G-A--A----A----A-----A-------T-G-AAATTC-AA-----AAC-AAGGCA------------GAA------------------CTA-TG
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                11416 39 +    109717 T----------GG-A-A-A---G-A--A----A----A-----A-------T-G-AAACTC-AA-----AAC-AAGGCA------------GAA------------------CTA-TG
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               15802 39 +     16540 T----------GG-A-A-A---G-A--A----A----A-----A-------T-G-AAATTC-AA-----AAC-AAGGCA------------GAA------------------CTA-TG
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                16077 39 +     27497 T----------GG-A-A-A---G-A--A----A----A-----A-------T-G-AAACTC-AA-----AAC-AAGGCA------------GAA------------------CTA-TG
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           18534 39 +     26808 T----------GG-A-A-A---G-A--A----A----A-----A-------T-G-AAATTC-AA-----AAC-AAGGCA------------GAA------------------CTA-TG
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                33272 39 +     46535 T----------GG-A-A-A---G-A--A----A----A-----A-------T-G-AAACTC-AA-----AAC-AAGGCA------------GAA------------------CTA-TG
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              15996 39 -     29447 T----------GG-A-A-A---G-A--A----A----A-----A-------T-G-AAACTC-AA-----AAC-AAGGCA------------GAA------------------CTA-TG
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129893029 41 - 159252932 t----------gg-a-a-g---g-a--a----aa---a-----a-------a-t-aaaccttat-----aaC-AAGGCA------------GAA------------------CTT-TG
i Felis_catus.CM001386.2                                I 8 C 0
s Felis_catus_fca126.CM031420.1                         129280116 41 - 158578461 t----------gg-a-a-g---g-a--a----aa---a-----a-------a-t-aaaccttat-----aaC-AAGGCA------------GAA------------------CTT-TG
i Felis_catus_fca126.CM031420.1                         I 8 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 21261 41 +     52776 T----------GG-A-A-G---G-A--A----A---AA-----A-------A-T-AAACCTTAT-----AAC-AAGGCA------------GAA------------------CTT-TG
i Felis_nigripes.FelNig_flattened_line_8080             I 8 C 0
s Galago_moholi.ctg555                                     211036 39 -    847004 T----------GA-G-A-A---G-A--A----A----A-----T-------T-G-AAACTC-AA-----AAC-AAGGCA------------GAA------------------CTA-CG
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           13410 39 -     43889 T----------GA-G-A-A---G-A--A----A----A-----T-------T-G-AAACTC-AA-----AAC-AAGGCA------------GAA------------------CTA-CG
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          10482 39 +     27357 T----------GA-G-A-A---G-A--A----A----A-----T-------T-G-AAACTC-AA-----AAC-AAGGCA------------GAA------------------CTA-TG
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               156387 36 +    324696 G----------CA-A-G-G---A-A--A----A----A-----A-------T-A-AAACTG-AT-----AA----GGCA------------GAA------------------CTA-TG
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    181355 42 -    189561 t----------gg-a-a-g---g-a--a--aaa----a-----a------at-a--aaccttat-----aAC-AAGGCA------------GAA------------------CTA-TG
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 5 C 0
s Glis_glis.GliGli_scaffold_79770                           13174 34 -     18683 ------------------G---G-A--A----A----A-----A-------T-A-AAACTG-AT-----AAC-AAGAAA------------GAA------------------CTA-TG
i Glis_glis.GliGli_scaffold_79770                       I 5 C 0
s Gorilla_beringei.k141_111300                               5454 40 -     14630 T----------AG-A-A-GA--A-A--A----A----C-----A-------T-G-ACACTC-AT-----GAC-AAGGCA------------GAA------------------CTA-TG
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119652554 40 - 195582420 t----------ag-a-a-ga--a-a--a----a----c-----a-------t-g-acACTC-AT-----GAC-AAGGCA------------GAA------------------CTA-TG
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   77706 32 +    118900 ------------------G---G-A--A----A----A-----A-------T-A-AAACTG-AT-----AAC-AAGACA--------------C------------------CTA-TA
i Graphiurus_murinus.GraMur_scaffold_4493               I 2 C 0
s Hapalemur_alaotrensis.k141_1280836                         1986 39 +     10286 T----------GG-A-A-A---G-A--A----A----A-----A-------T-G-AAACTC-AA-----ACC-AAGGCA------------GAA------------------CTA-CG
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                              463 39 -     11661 T----------GG-A-A-A---G-A--A----A----A-----A-------T-G-AAACTC-AA-----ACC-AAGGCA------------GAA------------------CTA-TG
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             5792 39 +     56096 T----------GG-A-A-A---G-A--A----A----A-----A-------T-G-AAACTC-AA-----ACC-AAGGCA------------GAA------------------CTA-TG
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        29042 39 -     42470 T----------GG-A-A-A---G-A--A----A----A-----A-------T-G-AAACTC-AA-----ACC-AAGGCA------------GAA------------------CTA-TG
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        45665 39 -     54384 T----------GG-A-A-A---G-A--A----A----A-----A-------T-G-AAACTC-AA-----ACC-AAGGCA------------GAA------------------CTA-TG
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              17312 41 +     53719 T----------AG-A-A-G---G-A--A----A---AA-----A-------A-T-AAACCTTAT-----TAC-AAGGCA------------GCA------------------CTA-TG
i Helogale_parvula.HelPar_flattened_line_22962          I 8 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                27569 44 -     91191 T----------AG-A-A-G---G-A--AAAAAA----A-----A-A-----T-A--AACCTTAT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 8 C 0
s Heterocephalus_glaber.JH602058.1                        2551191 39 +  31725842 c----------tg-c-a-a---g-g--a----a----a-----a-------t-a-aaactg-at-----aac-AAAGCA------------GAA------------------TTC-TG
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               60950 21 +     73687 -----------------------------------------------------------------------------T-ACTAACAAGACAGAG--C----------------TT-TG
i Heterohyrax_brucei.HetBruBak_scaffold_25354           I 23 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              147211 42 +    277961 T----------GG-A-A-G---GAA--A----A----A-----A-A-----A-T-AAACCTTAT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Hippopotamus_amphibius.HipAmp_scaffold_1308           I 8 C 0
s Hipposideros_armiger.JXIK01001085.1                      278482 41 -    477199 t----------gg-a-g-g---g-ga-a----a----a-----a-------a-c-aaaccttAT-----AAC-AAAGCA------------GAA------------------CTA-TA
i Hipposideros_armiger.JXIK01001085.1                   I 8 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              7627 41 -      9143 T----------GG-A-G-G---G-G-AA----A----A-----A-------A-C-AAACCTTGT-----AAC-AAGGCA------------GAA------------------CTA-TA
i Hipposideros_galeritus.HipGal_scaffold_104691         I 8 C 0
s Hoolock_leuconedys.ctg649                                   103883 40 +    115816 T----------AG-A-A-GA--A-A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Hoolock_leuconedys.ctg649                                I 7 I 223
s Hyaena_hyaena.HyaHya_flattened_line_20729                 17382 40 -     67322 T----------GG-A-A-G---G-A--A----A----A-----A-------A-T-AAACCTTAT-----TAT-AAGGCA------------GAA------------------CTA-TG
i Hyaena_hyaena.HyaHya_flattened_line_20729             I 8 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19076 39 -    119109 C----------TA-T-G-A---G-G--A----A----A-----A-------T-A-AAGCTG-GT-----AAC-AAGGCA------------GAA------------------CTC-TG
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              5285 40 +      5897 T----------AG-A-A-GA--A-A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAG------------------CTA-TG
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_1878600                               178 40 -      1230 T----------AG-A-A-GA--A-A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAG------------------CTA-TG
i Hylobates_agilis.k141_1878600                         C 0 C 0
s Hylobates_klossii.k141_285563                               330 13 +      1026 T----------AG-A-A-GA--A-A--A----A----A-----G--------------------------------------------------------------------------
i Hylobates_klossii.k141_285563                         C 0 I 193
s Hylobates_pileatus_b.ContigUN                                 14624831 40 -  25970782 T----------AG-A-A-GA--A-A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAG------------------CTA-TG
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            2087 40 -      2977 T----------AG-A-A-GA--A-A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             33990 40 -     60944 T----------AG-A-A-GA--A-A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAG------------------CTA-TG
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     6252 39 +     22540 C----------TA-G-A-A---G-G--A----A----A-----A-------T-A-AAACTG-GT-----AAC-AAGGTA------------GAA------------------CTC-GG
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7125955 39 +  13083262 t----------at-a-g-g---a-a--a----a----t-----a-------t-a-aaactg-at-----CCC-AAGGCA------------GAA------------------CCC-TG
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_5141390                                    504 39 -      3181 T----------GG-A-A-A---G-A--A----A----A-----A-------T-G-AAACTC-AA-----AAC-AAGGCA------------GAA------------------CTA-TG
i Indri_indri.k141_5141390                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               9114 41 +     17520 T----------GG-A-A-G---G-A--A----A----A-----A-A-----A-T-AAACCTTAT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Inia_geoffrensis.IniGeo_flattened_line_66725          I 4 C 0
s Jaculus_jaculus.JH725517.1                              8565993 41 +  11848649 a----------aaga-a-g---g-a--a---aa----a-----a-------t-a-aaacca-at-----aac-gAGACA------------GAA------------------CTA-CA
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               23726 41 +     37189 T----------GG-A-A-G---G-A--A----A----A-----A-A-----A-T-AAACCTTAT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Kogia_breviceps.KogBre_flattened_line_35920           I 4 C 0
s Lagothrix_lagothricha.k141_12968                          50345 40 -    147782 G----------GG-A-A-GG--A-A--A----A----A-----A-------T-G-AAACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   114337 40 -    115756 T----------GC-A-A-G---A-A--AA---A----A-----A-------A-C-AAACTTTAT-----AAT-AAGGCA------------G-A------------------CTG-TA
i Lasiurus_borealis.LasBor_scaffold_5102                I 5 C 0
s Lemur_catta.scaffold_1                                258407348 39 - 285822530 t----------GG-A-A-A---G-A--A----A----A-----A-------T-G-AAACTC-AA-----AAC-AAGGCA------------GAA------------------CTA-TG
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        24093 39 +     39228 T----------GG-A-A-A---G-A--A----A----A-----A-------T-G-AAGCTC-AA-----AAC-AAGGCA------------GAA------------------CTA-TG
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            53477 39 +     63517 T----------GG-A-A-A---G-G--A----A----A-----A-------T-G-AAGCTC-AA-----AAC-AAGGCA------------GAA------------------CTA-TG
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        78738 39 +    116806 T----------GG-A-A-A---G-A--A----A----A-----A-------T-G-AAGCTC-AA-----AAC-AAGGCA------------GAA------------------CTA-TG
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     31732 39 -     33031 T----------GG-A-A-A---G-G--A----A----A-----A-------T-G-AAGCTC-AA-----AAC-AAGGCA------------GAA------------------CTA-TG
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3086082 36 -   3498232 ------------------------aaaa----aa---a-----a-------a-t-aaatcttat-----aag-AAGGCA------------TAA------------------CTA-TG
i Leptonychotes_weddellii.KB714749.1                    I 13 C 0
s Lepus_americanus.LepAme_scaffold_62849                    13360 34 +     22452 ------------------G---C-A--A----A----A-----A-------C-A-AAATTG-AT-----AAC-CAGGCA------------GAA------------------CTA-TG
i Lepus_americanus.LepAme_scaffold_62849                I 4 C 0
s Lipotes_vexillifer.KE558548.1                            136070 41 +   3060487 t----------gg-a-a-g---g-a--a----a----a-----g------aa-t-aaaccTTAT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Lipotes_vexillifer.KE558548.1                         I 4 C 0
s Lophocebus_aterrimus.ctg55                             19248488 39 +  19376315 T----------AG-A-A-G---A-A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           10787 35 +     84689 ----------------A-A---G-A--A----A----A-----T-------T-G-AAACTC-AA-----AAC-AAGGCA------------GAA------------------CTA-TG
i Loris_lydekkerianus.k141_550999                       I 1 C 0
s Loris_tardigradus.ctg97                                 3778537 35 +   6799190 ----------------A-A---G-A--A----A----A-----T-------T-G-AAACTC-AA-----AAC-AAGGCA------------GAA------------------CTA-TG
i Loris_tardigradus.ctg97                               I 1 C 0
s Lycaon_pictus.CM007556.1                               11088243 15 +  39895028 -----------------------------------------------------------------------a-aaggcA------------GAA------------------CTA-TG
i Lycaon_pictus.CM007556.1                              I 24 C 0
s Loxodonta_africana.GL010040.1                          20594334 18 -  62548349 a----------gg-a-a-g---g-a--a----a----a-----a-------t-a-aact-----------------------------------------------------------
i Loxodonta_africana.GL010040.1                         I 4 I 1
s Macaca_arctoides.k141_2201161                             20230 32 +     74745 ------------------------A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Macaca_arctoides.k141_2201161                         I 6 C 0
s Macaca_assamensis.Contig65                             12706680 39 +  12821369 T----------AG-A-A-G---A-A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                2322 39 -      3136 T----------AG-A-A-G---A-A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           47140 39 +     63263 T----------AG-A-A-G---A-A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                 1845 39 -      2568 T----------AG-A-A-G---A-A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 2430 39 -      7381 T----------AG-A-A-G---A-A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  45647 39 -     79256 T----------AG-A-A-G---A-A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196035754 39 + 196197964 t----------ag-a-a-g---a-a--a----a----a-----a-------t-g-acaCTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11445924 39 +  11645122 t----------ag-a-a-g---a-a--a----a----a-----a-------t-g-acaCTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   4594 39 -     46448 T----------AG-A-A-G---A-A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                2268 39 -     13212 T----------AG-A-A-G---A-A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------CAA------------------CTA-TG
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 15947 39 -     55006 T----------AG-A-A-G---A-A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43841063 39 +  43892939 T----------AG-A-A-G---A-A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               17233 39 -     24607 T----------AG-A-A-G---A-A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               4599 39 -     27140 T----------AG-A-A-G---A-A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                701685 40 +    802869 T----------GA-A-A-G---G-A--A----A----A-----A-------A-C-AAAACTTAT-----AAC-AAAGCA------------GAA------------------CTA-TA
i Macroglossus_sobrinus.MacSob_scaffold_879             I 8 C 0
s Mandrillus_leucophaeus.scaffold125                     43437648 39 -  43563597 T----------AG-A-A-G---A-A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4450468 39 -   4543643 T----------AG-A-A-G---A-A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            145719 39 +    252755 t----------gg-a-a-g---a-a--a----a----a-----a-------a-t-aa-acctgt-----aAC-AAGGCA------------GGA------------------CTA-TG
i Manis_javanica.JSZB01003966.1                         I 9 I 433
s Manis_pentadactyla.KN017078.1                             35798 39 +     58827 t----------gg-a-a-g---a-a--a----a----a-----a-------a-t-aa-acctgt-----aaC-AAGGCA------------GGA------------------CTA-TG
i Manis_pentadactyla.KN017078.1                         I 11 I 497
s Marmota_marmota.CZRN01000005.1                         36873793 39 +  64221397 t----------ac-a-g-g---a-a--a----a----t-----a-------t-a-aaactg-at-----CCC-AAGGCA------------GAA------------------CCC-TA
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       64514 48 -    234502 T----------GG-A-A-G---G-A-AA----A----A-----ACAAACAAA-C-AAACCTAAT-----AAC-AAGGCA------------GAA------------------CTT-CA
i Megaderma_lyra.MegLyr_scaffold_3562                   I 8 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             1095 42 -     87323 T----------GG-A-A-G---G-A--A----A--AAA-----A-------A-T-AAACCTTAT-----AAG-AAGGCT------------TAT------------------CTA-TG
i Mellivora_capensis.MelCap_flattened_line_15433        I 20 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               12829 40 +     15977 T----------GA-G-A-A---G-G--AA---A----A-----T-------T-A-AAACAA-GT-----CAC-AATACT------------TAA------------------CCA-TG
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1047041 41 -  26018355 t----------ga-g-a-a---g-g--a---aa----a-----t------tt-a-aaacca-aa-----gac-AAAGCT------------GGA------------------GTA-AG
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_227248                    404 41 -      1377 T----------GG-A-A-G---G-A--A----A----A-----A-A-----A-T-AAACCTTAT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Mesoplodon_bidens.MesBid_scaffold_227248              I 4 C 0
s Microcebus_murinus.CM007691.1                          16510365 39 +  47401472 t----------gg-a-a-a---g-a--a----a----a-----a-------t-g-caacTC-AG-----AAC-AAGGCA------------GAA------------------CTA-TG
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  34594  8 -     48017 ------------------------------------------------------------------------------A------------GAG-------------------GA-AC
i Microgale_talazaci.MicTal_scaffold_34660              I 14 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               22786 40 -     32043 T----------GT-A-A-G---A-G--A----A----A-----A-------A-C-AAACCTTAT-----AAC-AAGGCA------------GAA------------------CTG-TA
i Micronycteris_hirsuta.MicHir_scaffold_37978           I 7 C 0
s Microtus_ochrogaster.CM001673.1                        22820179 41 -  98408828 T----------GA-G-A-A---G-g--g---aa----a-----t------tt-a-aaagca-aa-----gac-aaCGCT------------GAA------------------GTA-TG
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8209781 40 +  10048721 t----------gc-a-a-g---a-a--a----a----a-----a-------a-c-aaacgtTAT-----AAC-AAGGCA------------GAA------------------CTG-GA
i Miniopterus_natalensis.LDJU01000022.1                 I 8 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            34435 40 +     45743 T----------GC-A-A-G---A-A--A----A----A-----A-------A-C-AAACGTTAT-----AAC-AAGGCA------------GAA------------------CTG-GA
i Miniopterus_schreibersii.MinSch_scaffold_24116        I 8 C 0
s Miopithecus_ogouensis.k141_2935907                         2197 39 +     29742 T----------TG-A-A-T---A-A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        11592 42 -    104932 -----------GG-A-A-G---G-AAAA----A---AA-----A-------A-T-AAATCTTAT-----AAG-AAGGCA------------TAA------------------CTA-TG
i Mirounga_angustirostris.MirAng_flattened_line_8852    I 9 C 0
s Mirza_zaza.k141_226143                                     5753 39 +      8497 T----------GG-A-A-A---G-A--A----A----A-----A-------T-G-CAACTC-AG-----AAC-AAGGCA------------GAA------------------CTA-TG
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 146499 41 +    154973 T----------GG-A-A-G---G-A--A----A----A-----A-A-----A-T-AAACCTTAT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Monodon_monoceros.MonMon_M_scaffold_5598              I 4 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                161309 40 +    265003 T----------GT-A-A-G---A-G--A----A----A-----A-------A-C-AAACCTTCT-----AAC-AAGGCA------------GAA------------------CTG-TA
i Mormoops_blainvillei.MorMeg_scaffold_2952             I 8 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  1587 41 -     19904 T----------GG-A-A-A---G-A--AA---A----A-----A-A-----T-A--AGCCTTAT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Moschus_moschiferus.MosMos_scaffold_78805             I 4 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  145006 42 -    168139 T----------AG-A-A-G---G-A--A----A--AAA-----A-------A-T-AAACCTTAT-----TAC-AAGGCA------------GCA------------------CTA-TG
i Mungos_mungo.MunMun_flattened_line_8729               I 8 C 0
s Murina_feae.MurFea_scaffold_2254                          19621 39 -    100666 T----------GC-A-A-G---A-A--A----A----A-----A-------A-T-AAACTTTAT-----AAC-AAGGCA------------G-A------------------CTG-TA
i Murina_feae.MurFea_scaffold_2254                      I 5 C 0
s Mus_caroli.LT608236.1                                  70766674 40 +  92629107 t----------ga-a-a-a---g-a--a---aa----a-----t-------t-a-agaccA-AT-----CAC-CAAGCT------------CAA------------------CTA-TG
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75489734 40 +  98207768 g----------ga-a-a-a---g-a--a---aa----a-----t-------t-a-agacca-AT-----CGC-CAAACT------------CAA------------------CTA-TG
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67555967 40 +  89017189 T----------GT-G-A-A---G-G--AA---A----A-----T-------T-A-AGACCA-AT-----CGC-CAAGCT------------CAA------------------CTA-TG
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74330910 40 +  97876770 t----------ga-a-a-a---g-a--a---aa----a-----t-------t-a-agacca-AT-----CGC-CAAGCT------------CAA------------------CTA-TG
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             11938 32 +     98495 ------------------------A--A----T----A-----A-------G-A-ACACTG-AT-----GAT-AAGACA------------GAG------------------CTA-TG
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4424464 42 -  28371801 t----------gg-a-a-g---g-a--a----aaa--a-----a-------a-t-aaaccttat-----gaG-AAGGCT------------TAA------------------CTA-TG
i Mustela_putorius.JH417978.1                           I 23 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     90092 56 -    117718 C----------TG-T-A-A---G-G--A----A----A-----A-------T-A-AATCGG-AT-----AAC-AAA-CA------------GAAAGCATCCACTTTACCATCCAC-TG
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               967930 40 +   8389877 t----------ac-a-a-g---g-a--a----aa---a-----a-------a-c-aaactttat-----aaC-ATGGCA------------G-A------------------CTG-TA
i Myotis_brandtii.KE161952.1                            I 5 C 0
s Myotis_davidii.KB114863.1                               5019607 41 +   6462685 t----------ac-a-a-g---a-a--a----aaa--a-----a-------a-c-aaactttat-----aaC-ATGGCA------------G-G------------------CTG-TA
i Myotis_davidii.KB114863.1                             I 5 C 0
s Myotis_lucifugus.GL429887.1                             3465512 40 -   3747815 t----------ac-a-a-g---a-a--a----aa---a-----a-------a-c-aaactttat-----aaC-ATGGCA------------G-A------------------CTG-TA
i Myotis_lucifugus.GL429887.1                           I 5 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        10725 24 +     66751 T----------AC-A-A-G---A-A--A----A---AA-----A-------A-C-AAACTTTAT------------------------------------------------------
i Myotis_myotis.MyoMyo_scaffold_6123                    I 5 I 13
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             5137 26 -      8794 -------------------------------------------------------AAAACTTAC-----AGT-GAGACG------------GAG------------------TTA-TG
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        I 18 C 0
s Nannospalax_galili.KL201303.1                            118782 40 +    362372 C----------GG-G-A-A---G-G--AA---A----A-----A-------T-G-AAGCCA-GT-----CAC-AAGGCA------------GAA------------------CTA-TG
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               8703 39 +     48152 T----------AG-A-A-G---A-A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAG------------------CTA-TG
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4484983 42 -  14209539 -----------gg-a-a-g---g-aaaa----aa---a-----a-------a-t-aaatcttat-----aag-AAGGCA------------TAA------------------CTA-TG
i Neomonachus_schauinslandi.NINY01007774.1              I 8 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3951111 41 -   4490290 t----------gg-a-a-g---g-a--a----a----a-----a------aa-t-aaaccttat-----aAC-AAGGCA------------GAA------------------CTA-TG
i Neophocaena_asiaeorientalis.KZ688543.1                I 4 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  49397 40 +     94413 T----------GT-A-A-G---A-A--A----A----A-----A-------A-C-AAACCTTAT-----AAC-AAGGCA------------GAA------------------CTG-TA
i Noctilio_leporinus.NocLep_scaffold_12062              I 9 C 0
s Nomascus_annamensis.k141_220265                             597 41 +      1763 T----------AG-A-A-GA--A-A--A----A----A-----A-A-----T-G-ACACTC-AT-----AAC-AAGGCA------------GAG------------------CTA-TG
i Nomascus_annamensis.k141_220265                       I 7 C 0
s Nomascus_concolor.k141_226614                              1389 40 -      5092 T----------AG-A-A-GA--A-A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAG------------------CTA-TG
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_642452                            2172 40 +      2851 T----------AG-A-A-GA--A-A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Nomascus_gabriellae.k141_642452                       I 7 n 40
s Nomascus_siki_b.tarseq_80                             25107 40 -  18771707 T----------AG-A-A-GA--A-A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAG------------------CTA-TG
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  2810 40 +      4512 T----------AG-A-A-GA--A-A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAG------------------CTA-TG
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                31044 15 +   3668941 -----------------------------------------------------------------------a-aaggcA------------GAA------------------CTA-TG
i Nyctereutes_procyonoides.CAJHUB010000786.1            I 24 C 0
s Nycticebus_bengalensis.LG16                            65567228 35 -  95554990 ----------------A-A---G-A--A----A----A-----T-------T-G-AAACTC-AA-----AAC-AAGGCA------------GAA------------------CTA-AG
i Nycticebus_bengalensis.LG16                           I 1 C 0
s Nycticebus_coucang.k141_2051882                            3954 35 +      6470 ----------------A-A---G-A--A----A----A-----T-------T-G-AAACTC-AA-----AAC-AAGGCA------------GAA------------------CTA-AG
i Nycticebus_coucang.k141_2051882                       I 1 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65669563 35 +  89412551 ----------------A-A---G-A--A----A----A-----T-------T-G-AAACTC-AA-----AAC-AAGGCA------------GAA------------------CTA-TG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     I 1 C 0
s Ochotona_princeps.JH802095.1                            4996108 34 -  23139505 ------------------g---c-a--g----a----a-----a-------t-a-aaattg-at-----aaC-CAGGCA------------GAA------------------CTA-CG
i Ochotona_princeps.JH802095.1                          I 4 C 0
s Octodon_degus.JH651621.1                                3685649 38 +  10294119 c----------ta-t-a-a---g-g--a----a----a-----a-------t-a-aatctg-aT-----AAA-AAA-CA------------GAA------------------CTC-TG
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             679650 41 -   3126709 t----------gg-a-a-a---g-a--a----aa---a-----a-------a-t-aaatcttat-----aag-aAGGCA------------TAA------------------CTA-TG
i Odobenus_rosmarus.KB229369.1                          I 8 C 0
s Odocoileus_virginianus.KZ101650.1                       1079791 43 +   1425656 t----------gg-a-a-g---g-a--a-aaaa----a-----a------at-a--aaccttat-----aAC-AAGGCA------------GAA------------------CTA-TG
i Odocoileus_virginianus.KZ101650.1                     I 4 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         37084 42 +     78940 t----------gc-a-a-g---g-g--a--aaa----a-----a------at-a--aaccttat-----aAC-AAGGCA------------GAA------------------CTA-TG
i Okapia_johnstoni.LVCL01S0017931.1                     I 5 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  125433 41 +    145789 T----------GA-G-A-A---G-G--GA---A----A-----T------TT-A-AAAGCA-AA-----GAC-AGCGCT------------GAA------------------GTA-TG
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  37225 34 +     62360 ------------------------G--AA---A----A-----T-A-----T-A-AAATCA-AA-----GAC-AAAGCA------------GAA------------------GTG-TG
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7224796 41 -   7562323 t----------gg-a-a-g---g-a--a----a----a-----a------aa-t-aaaccttat-----aAC-AAGGCA------------GAA------------------CTA-TG
i Orcinus_orca.KB316965.1                               I 4 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              57624 12 -     66828 G----------GG-G-G-G---A-A--A----A----A-----A--------------------------------------------------------------------------
i Orycteropus_afer.OryAfe_flattened_line_13509          I 5 I 9
s Oryctolagus_cuniculus.CM000803.1                      141876394 34 + 163896628 ------------------g---c-a--a----a----a-----a-------c-a-aaattg-at-----aac-cAGGCA------------GAA------------------CTA-TG
i Oryctolagus_cuniculus.CM000803.1                      I 4 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      308329 15 -    505867 -----------------------------------------------------------------------A-AAGGCA------------GAA------------------CTA-TG
i Otocyon_megalotis.JAEUCK010005121.1                   I 24 C 0
s Otolemur_crassicaudatus.k141_505435                         849 39 -     53940 T----------GA-G-A-A---G-A--A----A----A-----T-------T-G-AAACTC-AA-----AAC-AAGGCA------------GAA------------------CTA-CG
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18008829 39 -  38779656 t----------ga-g-a-a---g-a--a----a----a-----t-------t-g-aaaCTC-AA-----AAC-AAGGCA------------GAA------------------CTA-CA
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134077362 42 - 275406953 t----------ag-a-a-g---g-a--a--aaa----a-----a------at-a--aaccttat-----aAC-AAGGCA------------GAA------------------CTA-TG
i Ovis_aries.CM001582.2                                 I 6 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      78575 44 +    140051 A----------AG-A-A-G---G-A--AAAAAA----A-----A-A-----T-A--AACCTTAT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Ovis_canadensis.OviCan_scaffold_6251                  I 4 C 0
s Pan_paniscus.AJFE02002857.1                                 483 40 -      1091 c----------ag-a-a-ga--a-a--a----a----a-----a-------t-g-acactc-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Pan_paniscus.AJFE02002857.1                           I 302 I 11
s Pan_troglodytes.KZ622857.1                               327668 40 +    772158 c----------ag-a-a-ga--a-a--a----a----a-----a-------t-g-acactc-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Pan_troglodytes.KZ622857.1                            I 302 I 11
s Panthera_onca.PanOnc_flattened_line_1615                  34422 41 +    295523 T----------GG-A-A-G---G-A--A----A---AA-----A-------A-T-AAACCTTAT-----AAC-AAGGCA------------GAA------------------CTT-TG
i Panthera_onca.PanOnc_flattened_line_1615              I 8 C 0
s Panthera_pardus.KV860323.1                              3638156 41 +  18214204 t----------gg-a-a-g---g-a--a----aa---a-----a-------a-t-aaaccttat-----aaC-AAGGCA------------GAA------------------CTT-TG
i Panthera_pardus.KV860323.1                            I 8 C 0
s Panthera_tigris.KE721879.1                              5027831 41 -   6340057 t----------gg-a-a-g---g-a--a----aa---a-----a-------a-t-aaaccttat-----aaC-AAGGCA------------GAA------------------CTT-TG
i Panthera_tigris.KE721879.1                            I 8 C 0
s Pantholops_hodgsonii.KE114631.1                         1066223 31 -   1292953 --------------------------------a----a-----a------at-a--aacctTAT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Pantholops_hodgsonii.KE114631.1                       I 14 C 0
s Papio_anubis.CM001492.2                               188156435 39 - 188283584 t----------ag-a-a-g---a-a--a----a----a-----a-------t-g-acACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             4752 39 +      5367 T----------AG-A-A-G---A-A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47513820 39 +  47705337 T----------AG-A-A-G---A-A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 67796 39 -    104429 T----------AG-A-A-G---A-A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    6332 39 +     14967 T----------AG-A-A-G---A-A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 2191 39 -      7628 T----------AG-A-A-G---A-A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    115884 41 -    135482 T----------GG-A-A-G---G-A--A----A---AA-----A-------A-T-AAACCTTAT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 I 8 C 0
s Perodicticus_ibeanus.k141_117958                           5540 39 -     23713 T----------GA-G-A-A---G-A--A----A----A-----T-------T-G-AAACTC-AA-----AAC-AAGGCA------------GAA------------------CTA-TG
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            24853 39 -     27972 T----------GA-G-A-A---A-A--A----A----A-----T-------T-G-AAACTC-AA-----AAC-AAGGCA------------GAA------------------CTA-TG
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      44686 39 -     45160 T----------GG-A-A-G---G-A--G----A----A-----A-------T-A-AGACCA-GT-----AAC-AAGGCA------------GCT------------------CTA-TG
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4950469 41 -   8017169 t----------ga-g-a-a---g-g--a---aa----a-----t------gt-a-aaaccA-AA-----GAC-AAAGCT------------GAA------------------GTA-TG
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    12542 41 -     36578 T----------TA-C-A-A---G-A--A----A----A-----A-AA----A-A-AAACTG-AG-----AAC-AAGGCA------------GAA------------------CTC-TG
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            121401 41 -    122454 T----------GG-A-A-G---G-A--A----A----A-----A-A-----A-T-AAACCTTAT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Phocoena_phocoena.PhoPho_flattened_line_11948         I 4 C 0
s Piliocolobus_badius.k141_1987485                           2218 39 -      5908 T----------AG-A-A-G---A-A--A----A----A-----A-------T-G-ACATTC-AT-----AAC-AAGGCA------------GAG------------------CTA-TG
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       2842 39 -     17985 T----------AG-A-A-G---A-A--A----A----A-----A-------T-G-ACATTC-AT-----AAC-AAGGCA------------GAG------------------CTA-TG
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            2209 39 +      7694 T----------AG-A-A-G---A-A--A----A----A-----A-------T-G-ACATTC-AT-----AAC-AAGGCA------------GAG------------------CTA-TG
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26740687 39 +  26888534 t----------ag-a-a-g---a-a--a----a----a-----a-------t-g-acaTTC-AT-----AAC-AAGGCA------------GAG------------------CTA-TG
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            97547 41 +    112873 T----------GC-A-A-G---A-A--AA---A----A-----A-------ACC-AAACTTTAT-----AAC-AAGGCA------------G-A------------------CTG-TA
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        I 5 C 0
s Pithecia_albicans.k141_991845                             43951 40 -     61926 T----------GG-A-A-GG--A-A--A----A----A-----A-------T-G-AAACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        25336 40 +     78826 T----------GG-A-A-GG--A-A--A----A----A-----A-------T-G-AAACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              9383 40 -     15800 T----------GG-A-A-GG--A-A--A----A----A-----A-------T-G-AAACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        12582 40 -     16101 T----------GG-A-A-GG--A-A--A----A----A-----A-------T-G-AAACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          5810 40 +      9673 T----------GG-A-A-GG--A-A--A----A----A-----A-------T-G-AAACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13474810 40 -  19735023 T----------GG-A-A-GG--A-A--A----A----A-----A-------T-G-AAACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           13713 40 -     31692 T----------GG-A-A-GG--A-A--A----A----A-----A-------T-G-AAACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           5487 41 +     21690 T----------GG-A-A-G---G-A--A----A----A-----A-A-----G-T-AAACCTTAT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Platanista_gangetica.PlaMin_flattened_line_72990      I 4 C 0
s Plecturocebus_bernhardi.k141_959214                       23053 40 +     44506 T----------GG-A-A-GG--A-A--A----A----A-----A-------T-G-AAACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-CG
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        23265 40 +     67491 T----------GG-A-A-GG--A-A--A----A----A-----A-------T-G-AAACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      13505 40 -     98129 T----------GG-A-A-GG--A-A--A----A----A-----A-------T-G-AAACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     23105 40 +    147771 T----------GG-A-A-GG--A-A--A----A----A-----A-------T-G-AAACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        23362 40 -     23762 T----------GG-A-A-GG--A-A--A----A----A-----A-------T-G-AAACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          3824 40 -     55515 T----------GG-A-A-GG--A-A--A----A----A-----A-------T-G-AAACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         23178 40 +    152463 T----------GG-A-A-GG--A-A--A----A----A-----A-------T-G-AAACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                        895 40 -    119457 T----------GG-A-A-GG--A-A--A----A----A-----A-------T-G-AAACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-CG
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         12901 40 +    134592 T----------GG-A-A-GG--A-A--A----A----A-----A-------T-G-AAACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          23488 40 -     75465 T----------GG-A-A-GG--A-A--A----A----A-----A-------T-G-AAACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-CG
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              187340 40 -    373494 t----------ag-a-a-ga--a-a--a----a----c-----a-------t-a-acACTC-AT-----GAT-AAGGCA------------GAA------------------CTA-TG
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19807988 40 +  19899266 T----------AG-A-A-GA--A-A--A----A----C-----A-------T-A-ACACTC-AT-----GAT-AAGGCA------------GAA------------------CTA-TG
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               5951 39 -     15069 T----------AG-A-A-G---A-A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAG------------------CTA-TG
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              6081 39 +     14865 T----------AG-A-A-G---A-A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAG------------------CTA-TG
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                2062 21 -      9567 -----------------------------------------------------------------------------T-ACTAACAAGACAGAG--C----------------TT-TG
i Procavia_capensis.ProCapCap_scaffold_149274           I 23 C 0
s Prolemur_simus.MPIZ01000048.1                           6848727 39 +  12164890 t----------gg-a-a-a---g-a--a----a----a-----a-------t-g-aaactc-aa-----aac-AAGGCA------------GAA------------------CTA-TG
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     17026 39 -     30946 t----------gg-a-a-a---g-a--a----a----a-----a-------t-g-aaactc-aa-----aac-aAGGCA------------GAA------------------CTA-TG
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         3788 39 +     11805 T----------GG-A-A-A---G-G--A----A----A-----A-------T-G-AAACTC-AA-----AAC-AAGGCA------------GAA------------------CTA-TG
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           43126 39 +     52369 T----------GG-A-A-A---G-A--A----A----A-----A-------T-G-AAACTC-AA-----AAC-AAGGCA------------GAA------------------CTA-TG
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         35513 39 -     44753 T----------GG-A-A-A---G-A--A----A----A-----A-------T-G-AAACTC-AA-----AAC-AAGGCA------------GAA------------------CTA-TG
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            17437 39 +     27322 T----------GG-A-A-A---G-A--A----A----A-----A-------T-G-AAACTC-AA-----AAC-AAGGCA------------GAA------------------CTA-TG
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       17073 39 -     53241 T----------GG-A-A-A---G-G--A----A----A-----A-------T-G-AAACTC-AA-----AAC-AAGGCA------------GAA------------------CTA-TG
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         39337 39 -     48185 T----------GG-A-A-A---G-A--A----A----A-----A-------T-G-AAACTC-AA-----AAC-AAGGCA------------GAA------------------CTA-TG
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           34377 40 +     77221 t----------ga-g-a-a---g-g--a---aa----a-----t-------t-a-aaacaa-gt-----caC-AATACT------------TAA------------------CTA-TG
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            3954 40 -     27784 t----------ct-a-a-g---a-g--a----a----a-----a-------a-c-aaactctcT-----AAC-AAGGCA------------GAA------------------CTG-TA
i Pteronotus_parnellii.KE867983.1                       I 8 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        246773 43 -    344369 T----------GG-A-A-G---G-A--A----A-AAAA-----A-------A-T-AAACCTTGT-----AAG-AAGGCT------------TAA------------------CTA-TG
i Pteronura_brasiliensis.PteBra_flattened_line_1343     I 23 C 0
s Pteropus_alecto.KB031157.1                             13246076 40 -  17261082 t----------ga-a-a-g---g-a--a----a----g-----a-------a-c-aaaacttAT-----AAC-AAGGCA------------GAA------------------CTA-TA
i Pteropus_alecto.KB031157.1                            I 8 C 0
s Pteropus_vampyrus.KN525959.1                             604027 40 -   3946241 t----------ga-a-a-g---g-a--a----a----g-----a-------a-c-aaaacttAT-----AAC-AAGGCA------------GAA------------------CTA-TA
i Pteropus_vampyrus.KN525959.1                          I 8 C 0
s Puma_concolor.QAVW01000427.1                          131534409 41 - 161321710 t----------gg-a-a-g---g-a--a----aa---a-----a-------a-t-aaaccttat-----aaC-AAGGCA------------GAA------------------CTT-TG
i Puma_concolor.QAVW01000427.1                          I 8 C 0
s Pygathrix_cinerea.k141_374971                             30069 39 +     56732 T----------AG-A-A-G---A-A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAG------------------CTA-TG
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6806557 39 +   6970761 T----------AG-A-A-G---A-A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAG------------------CTA-TG
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             5948 39 +     18040 T----------AG-A-A-G---A-A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAG------------------CTA-TG
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                15870 43 +     68503 A----------GG-A-A-G---G-A--AAAA-A----A-----A-A-----T-A--AACCTTAT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 6 C 0
s Rattus_norvegicus.chr11                                13915676 40 +  90463843 T----------GG-G-A-A---G-T--TA---A----A-----T-------T-A-AGACCA-AT-----TGC-CAAGCT------------CAA------------------CTA-TG
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1787903 41 +   2252614 t----------cg-a-g-g---g-ga-a----a----a-----a-------a-c-aaaccttAT-----AAC-AAGGCA------------GAA------------------CTA-TA
i Rhinolophus_sinicus.LVEH01000179.1                    I 8 C 0
s Rhinopithecus_bieti.k119_554384                             360 39 -     17045 T----------AG-A-G-G---A-A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAG------------------CTA-TG
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206377844 32 - 206558726 ------------------------a--a----a----a-----a-------t-g-aCACTC-AT-----AAC-AAGGCA------------GAG------------------CTA-TG
i Rhinopithecus_roxellana.NC_044549.1                   I 6 C 0
s Rhinopithecus_strykeri.ctg4                            44856751 39 -  45163003 T----------AG-A-G-G---A-A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAG------------------CTA-TG
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                19416 40 +    109198 T----------GA-A-A-G---G-A--A----A----G-----A-------A-C-AAAACTTAT-----AAC-AAGGCA------------AAA------------------CTA-TA
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            I 8 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       8049 31 +     12214 --------------------------------A----A-----A-A-----T-A--AACCTTAT-----AAC-AAGGCA------------AAA------------------CTA-TG
i Saiga_tatarica.SaiTat_scaffold_82192                  I 13 C 0
s Saimiri_boliviensis.NW_024100938.1                     15672915 40 -  43202129 t----------gg-a-a-gg--a-a--a----a----a-----a-------t-g-agacTC-AT-----AAC-AAGGCA------------GAA------------------CCA-TG
i Saimiri_boliviensis.NW_024100938.1                    I 3 C 0
s Saimiri_cassiquiarensis.k141_808270                        4828 40 +     34089 T----------GG-A-A-GG--A-A--A----A----A-----A-------T-G-AGACTC-AT-----AAC-AAGGCA------------GAA------------------CCA-TG
i Saimiri_cassiquiarensis.k141_808270                   I 3 C 0
s Saimiri_macrodon.k141_2087127                              4770 40 -     60842 T----------GG-A-A-GG--A-A--A----A----A-----A-------T-G-AGACTC-AT-----AAC-AAGGCA------------GAA------------------CCA-TG
i Saimiri_macrodon.k141_2087127                         I 3 C 0
s Saimiri_oerstedii.k141_841116                              4863 40 +     67014 T----------GG-A-A-GG--A-A--A----A----A-----A-------T-G-AGACTC-AT-----AAC-AAGGCA------------GAA------------------CCA-TG
i Saimiri_oerstedii.k141_841116                         I 3 C 0
s Saimiri_sciureus.k141_1947592                              4841 40 +     60816 T----------GG-A-A-GG--A-A--A----A----A-----A-------T-G-AGACTC-AT-----AAC-AAGGCA------------GAA------------------CCA-TG
i Saimiri_sciureus.k141_1947592                         I 3 C 0
s Saimiri_ustus.k141_1282476                                 4778 40 -     76454 T----------GG-A-A-GG--A-A--A----A----A-----A-------T-G-AGACTC-AT-----AAC-AAGGCA------------GAA------------------CCA-TG
i Saimiri_ustus.k141_1282476                            I 3 C 0
s Sapajus_apella.ctg10                                   17341503 40 -  30362882 T----------GG-A-A-GG--A-A--A----A----A-----A-------T-G-AAACTC-AT-----AAT-AAGGCA------------GAA------------------CTA-TG
i Sapajus_apella.ctg10                                  I 5 C 0
s Sapajus_macrocephalus.k141_966464                         20864 40 -     62485 T----------GG-A-A-GG--A-A--A----A----A-----A-------T-G-AAACTC-AT-----AAT-AAGGCA------------GAA------------------CTA-TG
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   32416 10 -    114521 ------------------------------------------------------------TTAT-----AAT-CGG------------------------------------------
i Scalopus_aquaticus.ScaAqu_scaffold_9300               I 25 C 0
s Semnopithecus_entellus.k141_1572367                        3561 40 +     15331 T----------AG-A-A-A--AA-A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAG------------------CTA-TG
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       8966 28 +     20762 -------------------------------------------A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAG------------------CTA-TG
i Semnopithecus_hypoleucos.k141_761524                  I 11 C 0
s Semnopithecus_johnii.k141_785014                         118965 32 +    130994 ------------------------A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAG------------------CTA-TG
i Semnopithecus_johnii.k141_785014                      I 7 C 0
s Semnopithecus_priam.k141_410937                           37751 32 +     46263 ------------------------A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAG------------------CTA-TG
i Semnopithecus_priam.k141_410937                       I 7 C 0
s Semnopithecus_schistaceus.k141_387461                     30863 40 +     42640 T----------AG-A-A-A--AA-A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAG------------------CTA-TG
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        13903 40 +     30600 T----------AG-A-A-A--AA-A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAG------------------CTA-TG
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  100413 42 -    120886 T----------GG-G-G-A---A-G--AA---A----A-----T------TA-AAAAACCA-AA-----GAC-AGAGCT------------GGA------------------GTA-TG
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            18963 40 +    739146 T----------GG-A-A-G---A-A--A----A----A-----A-------T-T-AAAATGTGT-----AAC-AGGGCA------------GAA------------------CTA-TG
i Solenodon_paradoxus.SolPar_flattened_line_1012        I 9 C 0
s Spermophilus_dauricus.KZ294190.1                        2239871 39 +   2842873 t----------ac-a-g-g---a-a--a----a----t-----a-------t-a-aaactg-at-----CCC-AAGGCA------------GAA------------------CCC-TG
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             234895 41 -    276980 T----------GG-A-A-G---G-A--A----A---AA-----A-------A-T-AAACCTTAT-----AAG-AAGGCA------------TAA------------------CTA-TG
i Spilogale_gracilis.SpiGra_flattened_line_905          I 22 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            27668 41 +     62062 T----------AG-A-A-G---G-A--A----A---AA-----A-------A-T-AAACCTTAT-----TAT-AAGGCA------------TAA------------------CTA-TG
i Suricata_suricatta.SurSur_flattened_line_20339        I 8 C 0
s Sus_scrofa.CM000824.4                                 189271956 41 + 218635234 t----------ag-a-a-g---g-a--a----a----a-----a------aa-t-aaactttat-----aac-aAGGCA------------GAA------------------CTA-TG
i Sus_scrofa.CM000824.4                                 I 13 C 0
s Symphalangus_syndactylus.tarseq_24                        15092 40 -  13920577 T----------AG-A-A-GA--A-A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAT------------------CTA-TG
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                 337 38 +     20549 ------------T-A-A-A---A-A--A----A----A-----A-------A-A-AAACCTTAT-----AAC-AAGGCA------------GAA------------------CTG-GA
i Tadarida_brasiliensis.TadBra_scaffold_61492           I 7 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               14800 26 +     45698 -------------------------------------------------------AAAACTTAC-----AGT-GAGACA------------GAG------------------TTA-TG
i Tamandua_tetradactyla.TamTet_scaffold_26877           I 18 C 0
s Tapirus_indicus.TapInd_scaffold_176                      807214 31 +   1148477 --------------------------------A----A-----A-------A-A-CAAATTTAT-----AAC-AAGGCA------------GCA------------------CTA-TG
i Tapirus_indicus.TapInd_scaffold_176                   I 2 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  57915 41 +     99546 T----------GG-A-A-G---GAA--A----A----A-----A-------A-C-CAAATATAT-----AAC-AAGGCA------------GCA------------------CTA-TG
i Tapirus_terrestris.TapTer_scaffold_14939              I 7 C 0
s Tarsius_lariang.k141_609102                               26634 39 +     42269 A----------GG-A-A-A---G-A--A----A----A-----A-------T-G-AAACTC-AG-----AAA-AAGGCA------------GAA------------------CTG-TG
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               59950 39 +     65473 A----------GG-A-A-A---G-A--A----A----A-----A-------T-G-AAACTC-AG-----AAA-AAGGCA------------GAA------------------CTG-TG
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194007957 39 - 194193292 t----------ag-a-a-g---a-a--a----a----a-----a-------t-g-acACTC-AT-----AAC-AAGGCA------------GAA------------------CTA-CG
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  5619 26 +      6782 -------------------------------------------------------AAACCGTAT-----AGT-AAGACA------------AAG------------------TTA-TG
i Tolypeutes_matacus.TolMat_scaffold_269431             I 18 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  135946 40 -    259118 T----------GT-A-A-G---A-G--A----A----A-----A-------A-C-AAACCTTAT-----AAC-AAGGCA------------GAA------------------CTG-TA
i Tonatia_saurophila.TonSau_scaffold_3334               I 8 C 0
s Trachypithecus_auratus.k141_738098                        27060 39 +     38948 T----------AG-A-A-A---A-A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAG------------------CTA-TG
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   20792 39 -     32910 T----------AG-A-A-A---A-A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAG------------------CTA-TG
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      2178 39 -     12939 T----------AG-A-A-A---A-A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAG------------------CTA-TG
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       2121 32 -     14244 ------------------------A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAG------------------CTA-TG
i Trachypithecus_francoisi.k141_768164                  I 7 C 0
s Trachypithecus_geei.k141_670367                           43520 32 -     54611 ------------------------A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAG------------------CTA-TG
i Trachypithecus_geei.k141_670367                       I 7 C 0
s Trachypithecus_germaini.k141_868450                        1321 34 -     11566 ------------------A---A-A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAG------------------CTA-TG
i Trachypithecus_germaini.k141_868450                   I 4 C 0
s Trachypithecus_hatinhensis.k141_504423                     3500 32 -     15592 ------------------------A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAG------------------CCA-TG
i Trachypithecus_hatinhensis.k141_504423                I 7 C 0
s Trachypithecus_laotum.k141_760702                          2148 40 +     14371 T----------AG-A-A-A--AA-A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAG------------------CCA-TG
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                    437 32 +     12481 ------------------------A--A----A----A-----A-------T-T-ACACTC-AT-----AAC-AAGGCA------------GAG------------------CTA-TG
i Trachypithecus_leucocephalus.k141_381681              I 7 C 0
s Trachypithecus_melamera.k141_699241                         310 35 -     24393 T----------AG-A-A-A---A-A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAG----------------AG------------------CTA-TG
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       5551 40 -     28054 T----------AG-AAA-A---A-A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAG------------------CTA-TG
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44660351 40 -  44834318 T----------AG-A-A-A--AA-A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAG------------------CTA-TG
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       2659 40 +     13828 T----------AG-A-A-A--AA-A--A----A----A-----A-------T-G-ACACTC-AT-----AAC-AAGGCA------------GAG------------------CTA-TG
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   5261 46 +     90398 T----------GG-A-A-G-GGG-A--AAAA-A----A-----A-A-----T-A-AAACCTTGT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Tragulus_javanicus.TraJav_scaffold_14717              I 5 C 0
s Trichechus_manatus.JH594618.1                          16085004 21 +  31416278 -----------------------------------------------------------------------------t-ACTAACAAGACAAAG--C----------------TA-TG
i Trichechus_manatus.JH594618.1                         I 22 C 0
s Tupaia_chinensis.KB320831.1                             2793010 36 -   3938065 g----------gg-a-a-g---a-a--a----a----a-----a-------a-g-aaatgt-ag-----a----aggcA------------GGA------------------TTA-TA
i Tupaia_chinensis.KB320831.1                           I 1 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    5213 36 +     13056 G----------GG-A-A-G---G-A--A----A----A-----A-------A-G-AAACTT-TG-----A----AGGCA------------GGA------------------TTA-TA
i Tupaia_tana.TupTan_flattened_line_68454               I 1 C 0
s Tursiops_truncatus.MRVK01000923.1                      69313512 41 -  96451834 t----------gg-a-a-g---g-a--a----a----a-----a------aa-t-aaaccttat-----aaC-AAGGCA------------GAA------------------CTA-TG
i Tursiops_truncatus.MRVK01000923.1                     I 5 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   1433 21 +     10241 ------------------------------------------------------------TTTT-----AAC-AGGACA------------GAA------------------CTA-TG
i Uropsilus_gracilis.UroGra_scaffold_69449              I 8 C 0
s Ursus_maritimus.KK498671.1                              6514905 40 +  28682327 t----------gg-a-a-g---a-a--a----a---ca-----a-------a-t-agacCTTAT-----AAA-AAGGCA------------TA-------------------CTA-TA
i Ursus_maritimus.KK498671.1                            I 18 C 0
s Varecia_rubra.k141_432109                                  5427 39 -     20643 T----------GG-A-A-A---G-A--A----A----A-----A-------T-G-AAACTC-AA-----AAC-AAGGCA------------GAA------------------CTA-TG
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             24968 39 -     33872 T----------GG-A-A-A---G-A--A----A----A-----A-------T-G-AAACTC-AA-----AAC-AAGGCA------------GAA------------------CTA-TG
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1524756 41 -   2331223 t----------gg-a-a-g---g-a--a----a----a-----a------aa-t-aaacttgat-----aaC-AAGGCA------------GAA------------------TTA-TG
i Vicugna_pacos.KN269600.1                              I 6 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                138424 15 -    281493 -----------------------------------------------------------------------A-GAGGCA------------GAA------------------CTA-TG
i Vulpes_lagopus.VulLag_flattened_line_2045             I 24 C 0
s Xerus_inauris.XerIna_scaffold_7898                       126986 39 -    134049 T----------AC-A-A-G---T-A--A----A----A-----A-------T-A-AAATCG-AT-----CCC-AAGACA------------GAA------------------TTC-TG
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        214377 41 -    227762 t----------gg-a-a-a---g-a--a----aa---a-----a-------a-t-aaaTCTTAT-----AAG-AAGGCA------------TAA------------------CTA-TG
i Zalophus_californianus.ZalCal_flattened_line_4097     I 9 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     15090 41 -     20485 A----------AGGG-A-A---G-G--AA---A----A-----A-------C-A-AAACCA-GT-----ACC-AAGGCA------------GAG------------------CTA-TG
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           7011 41 -      8775 T----------GG-A-A-G---G-A--A----A----A-----A-A-----A-T-AAATGTTAT-----AAC-AAGGCA------------GAA------------------CTA-TG
i Ziphius_cavirostris.ZipCav_flattened_line_127025      I 4 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             38964  0 -     47444 C
e Sorex_araneus.JH798170.1                               17750754 3364 -  27805282 I
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               11977 11 +    209709 GAAATGCATCC
s Acinonyx_jubatus.LLWD01000356.1                         2034111 11 +   3721120 GAAATGCATCC
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    112745 11 -    189883 AAAAAGGATAT
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10657453 11 +  23371972 GAAATACATCC
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7094800 11 -  16596857 GAAATACATCC
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   17022 11 -     22067 GAAAAGCATCT
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   1487 11 -     60446 GAAATGCATCC
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         2207 11 -     29318 GAAATGCATCC
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         1142 11 +     38766 GAAATGCATCC
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          2101 11 -     80423 GAAATGCATCC
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            10405 11 -     18050 GAAATGCATCC
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_5460                                 11498 11 -     11521 GAAATGCATCC
i Alouatta_caraya.k141_5460                             C 0 N 0
s Alouatta_discolor.k141_811576                             11078 11 -     21359 GAAATGCATCC
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                 697 11 +      2129 GAAATGCATCC
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                         10378 11 -     10438 GAAATGCATCC
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_3537692                             130 11 +      1660 GAAATGCATCC
i Alouatta_nigerrima.k141_3537692                       C 0 C 0
s Alouatta_palliata.k141_1316127                            10316 11 +     10410 GAAATGCATCC
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            4123 11 -      4927 GAAATGCATCC
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_1531728                             262 11 -      1692 GAAATGCATCC
i Alouatta_seniculus.k141_1531728                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3520253 11 +   4113121 GAAATGCATCC
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      390445 11 -    631301 GAAATGCATTT
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            30834 11 +     33004 GAAATGCATCC
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 62758 11 +     78111 GAAATCCATCC
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            5700 11 +     22701 GAAATCCATCC
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5749657 11 +   9889416 gaaatcCATCC
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             6246 11 -    104377 GAAATCCATCC
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               6248 11 +     23246 GAAATCCATCC
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     3839 11 +      5067 GAAAGGCATCT
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 I 9
s Arctocebus_calabarensis.k141_587554                        1176 11 +      9265 GGAATGCATCT
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 8853 11 -     29036 GAAATGCATTT
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9539516 11 +  39197703 GAAATACATCC
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             60787 11 +     85812 GAAATACATCC
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                11800 11 +     89302 GAAATACATCC
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             16303 11 -     58268 GAAATACATCC
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             64295 11 +    119057 GAAATACATCC
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               6266 11 -     25888 GAAATACATCC
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 6910 11 -     16375 GAAACACATCC
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                                529 11 +      6337 GAAACACATCC
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26380327 11 +  51448160 GAAATGCATCC
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        5496 11 -     13118 GAAATGCATCC
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   43323 11 -     72089 GAAATGCATCC
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6559986 11 +   6870073 GAAATGCATCC
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138140095 11 - 161108492 GAAATGCATCC
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     572636 11 -    998990 GAAATGCATCC
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136295828 11 - 158972876 GAAATGCATCC
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1232907 11 -   1914593 GAAATGCATCC
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               114153 11 -    171031 GAAATGCATCC
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 13182 11 +    125063 GAAATGCATCC
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                15225 11 -    216513 GAAATGCATCC
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        7768 11 -    134917 GAAATGCATCC
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3219692 11 -   8989139 GAAATGCATCC
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           397393 11 -  15254737 GAAATGCATCC
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2973129 11 +   6889770 GAAATGCATCC
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11519601 11 +  39901454 GAAATACATCT
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   14626 11 +     87036 GAAATACATCT
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11266268 11 -  35597290 GAAATACATCT
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11088802 11 +  39895921 GAAATACGTCT
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16455817 11 -  44759192 GAAATACATCT
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21325329 11 + 157394656 GAAATGCATCC
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135706557 11 - 157403528 GAAATGCATCC
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          309199 11 +    345090 GAGATGTATCC
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               59645 11 +     67245 GAAATGCATTT
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   30854 11 +     33760 GGAAGACATCT
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   159019 11 -    276539 GAAATGCATCC
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 I 11
s Cavia_aperea.AVPZ01000278.1                            15786725 11 -  24422027 NNNNNNNNNNN
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15798661 11 -  24440124 GTAAGGCATCC
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       176852 11 +    436027 GTAAGGCATCC
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18890999 11 -  29618158 GAAATGCATTC
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 8543 11 -     26817 GAAATGCATTC
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                12786 11 +     25043 AAAATGCATTC
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         8227 11 +     21754 GAGATACGTCC
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4364006 11 +   7569818 GAAATGCATCC
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         3763 11 -      9338 GAAATGCATCC
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6555433 11 +   6739814 GAAATGCATCC
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      26910 11 +     60454 GAAATGCATCC
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          2116 11 -     21101 GAAATGCATCC
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         59425 11 -    107033 GAAATGCATCC
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        2315 11 -     17608 GAAATGCACCC
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          29811 11 +     30494 GAAATGCACCC
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          58656 11 -     59240 GAAATGCATCC
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          2357 11 +     16677 GAAATGCATCC
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           24516 11 +     35983 GAAATGCATCC
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11991043 11 +  12117833 GAAATGCATCC
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46477802 11 +  46592721 GAAATGCATCC
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      41353 11 -     45581 GAAATGCATCC
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       2358 11 +     35577 GAAATGCACCC
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        2134 11 -     25661 GAAATGCACCC
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        2113 11 -     17744 GAAATGCATCC
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        21728 11 +     37128 GAAATGCATCC
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           2887 10 -      6963 GAAATGCAT-C
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           59193 11 -     68416 GAAATGTATCC
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            8238 11 +     13308 GAAATGTATCC
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             5810 11 -     18223 GAAACGCATCC
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             22830 11 +     25473 GAAACGCATCC
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           41868 11 +     57117 GAAACGCATCC
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          46547 11 +     54541 GAAACGCATCC
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15961868 11 +  43084221 GCAAGGCACCC
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         71354 11 +    196370 GAAATGCATCC
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          15534 11 +     40510 GAAATGCATCC
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15139248 11 -  15256731 GAAATGCATCC
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      34329 11 -     53260 GAAATGCATCC
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101144889 11 + 101219884 GAAATGCATCC
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                16594 10 -     21363 GAAATGCAT-C
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           761897 10 +    964067 GAAATGCAT-C
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10886658 11 +  10971483 GAAACGCATCG
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147664823 11 + 156195979 GAAACGCATCG
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            16808 11 +     23629 GAAACGCATCG
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60613724 11 +  78930452 GACATCCTTCC
i Condylura_cristata.JH655880.1                         I 4 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         39832 11 -     40477 GAAACACATCC
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 278709 11 -    399297 GAAAGGCATAT
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53029374 10 +  72327488 C-AAAGCATAC
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_88140              2280 11 +     11655 AAAATACATTT
i Crocidura_indochinensis.CroInd_scaffold_88140         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            52147 11 -     70449 GAAATGCATCC
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  208273 11 -    956709 GTGTGACACCC
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 I 31
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 30856 11 -     67205 GTAAAGCATCC
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                17903 11 +     26546 GTAAAGCAGCT
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             58995  8 -    236241 ATAAAACA---
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          183772 10 -   6883506 GAAATGCAT-T
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16845045 11 +  31942871 GAAATGCATCC
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80036950 11 -  96802777 GAAATGCATCC
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18698920 11 -  18957592 GAGAtgcattt
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 322655 11 +    993696 GAAATGCATCC
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   3309 11 +    151128 GAAATGCATCC
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   157137 11 +    228994 GTGAAGCAGCC
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3656453 10 +   4240102 GAATGGT-GCC
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 28086 10 +     28912 GAATGGT-GCC
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                36239  2 -     73477 GA---------
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22998586 10 -  44670279 GAAATGCAT-C
i Echinops_telfairi.JH980316.1                          I 9 C 0
s Eidolon_helvum.KE772537.1                                 12385 11 +     24177 AAAGTGCATCC
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1491603 11 +   1727528 GAAAtgcatcc
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7816043 11 +  15467074 GAAATACATTC
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        239922 11 -    369425 AAAAAGAATAC
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           7029 11 -      7838 aaaaagaATAC
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85872325 11 +  99434291 GAAATACATCC
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4704288 11 +   6522550 GAAAGGCCTCA
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5853105 11 -   7175178 GAAATGCATCT
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13351610 11 +  41866177 GAAATGCATCT
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          13099 11 +     92910 GAAATGCATCT
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11534386 11 +  16010500 TAAATGCACCC
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48774016 11 -  48907691 GAAATGCATCC
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          315166 11 +    330699 TAAATGCATCC
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             61617 11 +     89355 GAAATGCATCC
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              5250 11 +     13586 GAAATGCATCC
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               5181 11 -      6809 GAAATGCATCC
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            11658 11 +     36558 GAAATGCATCC
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             7979 11 +     60246 GAAATGCATCC
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                11455 11 +    109717 GAAATGCATCC
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               15841 11 +     16540 GAAATGCATCC
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                16116 11 +     27497 GAAATTCATCC
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           18573 11 +     26808 GAAATGCATCC
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                33311 11 +     46535 GAAATGCATCC
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              16035 11 -     29447 GAAATGCATCC
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129893070 11 - 159252932 GAAATGCATCC
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129280157 11 - 158578461 GAAATGCATCC
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 21302 11 +     52776 GAAATGCATCC
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Galago_moholi.ctg555                                     211075 11 -    847004 GAAATGCATCT
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           13449 11 -     43889 GAAATGCATCT
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          10521 11 +     27357 GAAATGCATCT
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               156423 11 +    324696 GAAATGCATCC
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    181397 11 -    189561 GAAATGCATCC
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           13208 11 -     18683 GAAAGGTATAT
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               5494 11 -     14630 GAAATGCATCC
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119652594 11 - 195582420 GAAATGCATCC
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   77738 11 +    118900 GGAAGGTATGT
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         2025 11 +     10286 GAAATGCATCC
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                              502 11 -     11661 GAAATGCATCC
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             5831 11 +     56096 GAAATGCATCC
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        29081 11 -     42470 GAAATGCATCC
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        45704 11 -     54384 GAAATGCATCC
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              17353 11 +     53719 GAAATGCATCC
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                27613 11 -     91191 GAAATGCATCC
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2551230 11 +  31725842 GAAAAGCATCC
i Heterocephalus_glaber.JH602058.1                      C 0 I 11
s Heterohyrax_brucei.HetBruBak_scaffold_25354               60971 11 +     73687 GAAGTGCACCC
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              147253 11 +    277961 GAAATGCATCC
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      278523 11 -    477199 GAAATGCATCC
i Hipposideros_armiger.JXIK01001085.1                   C 0 I 5
s Hipposideros_galeritus.HipGal_scaffold_104691              7668 11 -      9143 GAAATGCATCC
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      4900 11 -   7690867 GAAATGCATCC
i Hoolock_leuconedys.ctg79                                 I 40 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 17422 11 -     67322 GAAATTCAGCC
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19115 11 -    119109 GGAAAGCATCC
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              5325 11 +      5897 GAAATGCATCC
i Hylobates_abbotti.k141_493872                         C 0 I 105
s Hylobates_agilis.k141_1878600                               218 11 -      1230 GAAATGCACCC
i Hylobates_agilis.k141_1878600                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14624871 11 -  25970782 GAAATGCACCC
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            2127 11 -      2977 GAAATGCATCC
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             34030 11 -     60944 GAAATGCACCC
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     6291 11 +     22540 GAAAAGCATCC
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7125994 11 +  13083262 GAAAGGCATCT
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 I 9
s Indri_indri.k141_5141390                                    543 11 -      3181 GAAATGCATCC
i Indri_indri.k141_5141390                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               9155 11 +     17520 GAAATGCATCC
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8566034 11 +  11848649 GAAAAGCATCT
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               23767 11 +     37189 GAAATGCATCC
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          50385 11 -    147782 GAAATGCATCC
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   114377 11 -    115756 GAAAGGCATTC
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258407387 11 - 285822530 GAAATGCATCC
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        24132 11 +     39228 GAAATGCATAC
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            53516 11 +     63517 GAAATGCATAC
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        78777 11 +    116806 GAAATGCATAC
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     31771 11 -     33031 GAAATGCATAC
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3086118 11 -   3498232 GAAATACATCC
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    13394 11 +     22452 GAAATGCGTCC
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            136111 11 +   3060487 GAAATGCATCC
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19248527 11 +  19376315 GAAATGCATCC
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           10822 11 +     84689 GAAATGCATCT
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3778572 11 +   6799190 GAAATGCATCT
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20594353 10 -  62548349 -aaatgCAATC
i Loxodonta_africana.GL010040.1                         I 1 C 0
s Lycaon_pictus.CM007556.1                               11088258 11 +  39895028 GAAATACATCT
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             20262 11 +     74745 GAAATGCATCC
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12706719 11 +  12821369 GAAATGCATCC
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                2361 11 -      3136 GAAATGCATCC
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           47179 11 +     63263 GAAATGCATCC
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                 1884 11 -      2568 GAAATGCATCC
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 2469 11 -      7381 GAAATGCATCC
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  45686 11 -     79256 GAAATACATCC
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196035793 11 + 196197964 GAAATGCATCC
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11445963 11 +  11645122 GAAATGCATCC
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   4633 11 -     46448 GAAATGTATCC
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                2307 11 -     13212 GAAATGCATCC
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 15986 11 -     55006 GAAATGCATCC
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43841102 11 +  43892939 GAAATGCATCC
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               17272 11 -     24607 GAAATGCATCC
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               4638 11 -     27140 GAAATGCATCC
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                701725  7 +    802869 GAAGTGC----
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 I 90
s Mandrillus_leucophaeus.scaffold125                     43437687 11 -  43563597 GAAATGCATCC
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4450507 11 -   4543643 GAAATGCATCC
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            146191 11 +    252755 gaaaTGTATCC
i Manis_javanica.JSZB01003966.1                         I 433 C 0
s Manis_pentadactyla.KN017078.1                             36334 11 +     58827 gaaaTGTATCC
i Manis_pentadactyla.KN017078.1                         I 497 C 0
s Marmota_marmota.CZRN01000005.1                         36873832 11 +  64221397 GAAAGGCATCT
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       64562 11 -    234502 CAAAAGCATCC
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             1137 11 -     87323 GAAATACATCC
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               12869 11 +     15977 GAAAAGAATAT
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1047082 10 -  26018355 A-AAAGCATAC
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_227248                    445 11 -      1377 GAAATGCATCC
i Mesoplodon_bidens.MesBid_scaffold_227248              C 0 C 0
s Microcebus_murinus.CM007691.1                          16510404 10 +  47401472 AAAATGCAT-C
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  34602  9 -     48017 GAAAT-CAT-C
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               22826 11 -     32043 GAAATGCATTT
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22820220 11 -  98408828 GAAAAGAATTC
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8209821 11 +  10048721 GAAATGCATCC
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            34475 11 +     45743 GAAATGCATCC
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         2236 11 +     29742 GAAATGCATCC
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        11634 11 -    104932 GAAATACATCC
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     5792 11 +      8497 AAAATGCATCC
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 146540 11 +    154973 GAAATGCATCC
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                161349 11 +    265003 GAAATGCATTT
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  1628 11 -     19904 GAAATGCATTC
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  145048 11 -    168139 GAAATGCATCC
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          19660 11 -    100666 GAAATGCATCC
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70766714 11 +  92629107 GAAAGTCATAT
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75489774 11 +  98207768 GAAAGCCATAT
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67556007 11 +  89017189 GAAAGCCATAT
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74330950 11 +  97876770 GAAAGCCATAT
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             11970 11 +     98495 GAAAGATATGT
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4424506 11 -  28371801 GAAATACATCC
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     90148 11 -    117718 GAAAAGCATCC
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               967970 11 +   8389877 GAAATGCATCC
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5019648 11 +   6462685 GATATGCATCC
i Myotis_davidii.KB114863.1                             C 0 I 11
s Myotis_lucifugus.GL429887.1                             3465552 11 -   3747815 GAAATGCATCC
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        10762 11 +     66751 GATATGCATCC
i Myotis_myotis.MyoMyo_scaffold_6123                    I 13 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             5163 10 -      8794 GAAATGCAT-C
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            118822 11 +    362372 GAAAAGCATCT
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               8742 10 +     48152 GAAATGCA-CC
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4485025 11 -  14209539 GAAATACATCC
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3951152 11 -   4490290 GAAATGCATCC
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  49437 11 +     94413 GAAACGCATTT
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_220265                             638 11 +      1763 GAAATGCATCC
i Nomascus_annamensis.k141_220265                       C 0 I 92
s Nomascus_concolor.k141_226614                              1429 11 -      5092 GAAATGCACCC
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_39679                              400 11 -     17937 GAAATGCATCC
i Nomascus_gabriellae.k141_39679                        I 40 C 0
s Nomascus_siki_b.tarseq_80                             25147 11 -  18771707 GAAATGCACCC
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  2850 11 +      4512 GAAATGCATCC
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                31059 11 +   3668941 GAAATACATCG
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65567263 11 -  95554990 GAAATGCATCT
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            3989 11 +      6470 GAAATGCATCT
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65669598 11 +  89412551 GAAATGCATTT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4996142 11 -  23139505 GAAATGCATCT
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3685687 11 +  10294119 GTAAAGCATCC
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             679691 11 -   3126709 GAAATACATCC
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1079834 11 +   1425656 GAAATGCATCC
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         37126 11 +     78940 GAAATGCATCC
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  125474 11 +    145789 GAAAAGAATAC
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  37259 11 +     62360 GAAAAGCATAC
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7224837 11 -   7562323 GAAATGCATCC
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              57645 11 -     66828 GACATGTGTCT
i Orycteropus_afer.OryAfe_flattened_line_13509          I 9 C 0
s Oryctolagus_cuniculus.CM000803.1                      141876428 11 + 163896628 GAAATGCATCC
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      308344 11 -    505867 GAAATACATCT
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                         888 11 -     53940 GAAATGCATCT
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18008868 11 -  38779656 GAAATGCATCT
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134077404 11 - 275406953 GAAATGCATCC
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      78619 11 +    140051 GAAATGCATCC
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127574860 11 - 205426864 GAAATGCATCC
i Pan_paniscus.CM003386.1                               I 40 I 28
s Pan_troglodytes.CM009241.2                            120152014 11 - 196562556 GAAATGCATCC
i Pan_troglodytes.CM009241.2                            I 40 I 28
s Panthera_onca.PanOnc_flattened_line_1615                  34463 11 +    295523 GAAATGCATCC
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3638197 11 +  18214204 GAAATGCATCC
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5027872 11 -   6340057 GAAATGCATCC
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1066254 11 -   1292953 GAAATGCATCC
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188156474 11 - 188283584 GAAATGCATCC
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             4791 11 +      5367 GAAATGCATCC
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47513859 11 +  47705337 GAAATGCATCC
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 67835 11 -    104429 GAAATGCCTCC
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    6371 11 +     14967 GAAATGCATCC
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 2230 11 -      7628 GAAATGCATCC
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    115925 11 -    135482 GAAATGCGTCC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           5579 11 -     23713 GGAATGCACCT
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            24892 11 -     27972 GGAATGCACCT
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      44725 10 -     45160 GAATGGT-GCC
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4950510 11 -   8017169 GAAAAGCATAC
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    12583 11 -     36578 GAAAAGCATCC
i Petromus_typicus.PetTyp_scaffold_33007                C 0 I 11
s Phocoena_phocoena.PhoPho_flattened_line_11948            121442 11 -    122454 GAAATGCATCC
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1987485                           2257 11 -      5908 GAAACGCCTCC
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       2881 11 -     17985 GAAACGCCTCC
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            2248 11 +      7694 GAAACGCCTCC
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26740726 11 +  26888534 GAAACGCCTCC
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            97588 10 +    112873 GAAAGGCAGT-
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             43991 11 -     61926 GAAATGCATCC
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        25376 11 +     78826 GAAATGCATCC
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              9423 11 -     15800 GAAATGCATCC
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        12622 11 -     16101 GAAATGCATCC
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          5850 11 +      9673 GAAATGCATCC
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13474850 11 -  19735023 GAAATGCATCC
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           13753 11 -     31692 GAAATGCATCC
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           5528 11 +     21690 GAAATGCATTC
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       23093 11 +     44506 GAAATGCATCC
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        23305 11 +     67491 GAAATGCATCC
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      13545 11 -     98129 GAAATGCATCC
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     23145 11 +    147771 GAAATGCATCC
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        23402 11 -     23762 GAAATGCATCC
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          3864 11 -     55515 GAAATGCATCC
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         23218 11 +    152463 GAAATGCATCC
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                        935 11 -    119457 GAAATGCATCC
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         12941 11 +    134592 GAAATGCATCC
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          23528 11 -     75465 GAAATGCATCC
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              187380 11 -    373494 GAAATACATCC
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19808028 11 +  19899266 GAAATACATCC
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               5990 10 -     15069 GAAATGCA-CC
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              6120 10 +     14865 GAAATGCA-CC
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                2083 11 -      9567 GAAGTGCACCC
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6848766 11 +  12164890 GAAATGCATCC
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     17065 11 -     30946 GAAATGCATCC
i Propithecus_coquerelli.NW_012147863.1                 C 0 T 632
s Propithecus_coronatus.k141_1353159                         3827 11 +     11805 GAAATGCATCC
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           43165 11 +     52369 GAAATGCATCC
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         35552 11 -     44753 GAAATGCATCC
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            17476 11 +     27322 GAAATGCATCC
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       17112 11 -     53241 GAAATGCATCC
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         39376 11 -     48185 GAAATGCATCC
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           34417 11 +     77221 GAAAAGAATAT
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            3994 11 -     27784 GGAAtgcattt
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        246816 11 -    344369 GAAATACATCC
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13246116 11 -  17261082 GAAGTGCATCC
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             604067 11 -   3946241 GAAGTGCATCC
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131534450 11 - 161321710 GAAATGCATTC
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             30108 10 +     56732 GAAATGCA-CC
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6806596 10 +   6970761 GAAATGCA-CC
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             5987 10 +     18040 GAAATGCA-CC
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                15913 11 +     68503 GAAATGCATCC
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13915716 11 +  90463843 GAAAACCATAT
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1787944 11 +   2252614 GAAACATGTCC
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                             399 10 -     17045 GAAATGCA-CC
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206377876 10 - 206558726 GAAATGCA-CC
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44856790 10 -  45163003 GAAATGCA-CC
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                19456 11 +    109198 GAAGTGCATCC
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       8080 11 +     12214 GAAATGCATCC
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15672955 11 -  43202129 GAAATGCATCC
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        4868 11 +     34089 GAAATGCATCC
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              4810 11 -     60842 GAAATGCATCC
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              4903 11 +     67014 GAAATGCATCC
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              4881 11 +     60816 GAAATGCATCC
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 4818 11 -     76454 GAAATGCATCC
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17341543 11 -  30362882 GAAATGCATTC
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         20904 11 -     62485 GAAATGCATTC
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   32426 10 -    114521 -ACATCCATAC
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        3601 10 +     15331 GAAATGCA-CC
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       8994 10 +     20762 GAAATGCA-CC
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         118997 10 +    130994 GAAATGCA-CC
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           37783 10 +     46263 GAAATGCA-CC
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     30903 10 +     42640 GAAATGCA-CC
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        13943 10 +     30600 GAAATGCA-CC
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  100455 11 -    120886 AAAATGTGCAC
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            19003 11 +    739146 GACTTGCATTC
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2239910 11 +   2842873 TAAAGGCATCT
i Spermophilus_dauricus.KZ294190.1                      C 0 I 9
s Spilogale_gracilis.SpiGra_flattened_line_905             234936 11 -    276980 GAAATACATCC
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            27709 11 +     62062 GAAATGCATCC
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189271997 11 + 218635234 GAAATGCATCC
i Sus_scrofa.CM000824.4                                 C 0 I 11
s Symphalangus_syndactylus.tarseq_24                        15132 11 -  13920577 GAAATGCATCC
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                 375 11 +     20549 GAAATGCATCC
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               14826 10 +     45698 GAAATGCAT-C
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      807245 11 +   1148477 AAAATGTATCC
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  57956 11 +     99546 AAAATGCATCC
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               26673 11 +     42269 GAGATGCGTCC
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               59989 11 +     65473 GAGATGCGTCC
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194007996 11 - 194193292 GAAATGCATCC
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  5645 10 +      6782 GAAACGCAT-C
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  135986 11 -    259118 AAAATGTATTT
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        27099 10 +     38948 GAAATGCA-CC
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   20831 10 -     32910 GAAACGCA-CC
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      2217 10 -     12939 GAAATGCA-CC
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       2153 10 -     14244 GAAATGCA-CC
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           43552 10 -     54611 GAAATGCA-CC
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        1355 10 -     11566 GAAATGCA-CC
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     3532 10 -     15592 GAAATGCA-CC
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          2188 10 +     14371 GAAATGCA-CC
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                    469 10 +     12481 GAAATGCA-CC
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                         345 10 -     24393 GAAATGCA-CC
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       5591 10 -     28054 GAAATGCA-CC
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44660391 10 -  44834318 GAAATGCA-CC
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       2699 10 +     13828 GAAATGCA-CC
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   5307 11 +     90398 GAAATCTATCC
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16085025 11 +  31416278 GAAATGCATCC
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2793046 10 -   3938065 GA-ACACATTC
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    5249 10 +     13056 GA-ACACATTC
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69313553 11 -  96451834 GAAATGCATCC
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   1454 11 +     10241 GAATTCTAGCC
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6514945 11 +  28682327 GAAATACAGCC
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  5466 11 -     20643 GAAATGCATCC
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             25007 11 -     33872 GAAATGCATCC
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1524797 11 -   2331223 GAAATGCATCC
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                138439 11 -    281493 GAAATACATCT
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       127025 11 -    134049 GAAAGGCATCT
i Xerus_inauris.XerIna_scaffold_7898                    C 0 I 9
s Zalophus_californianus.ZalCal_flattened_line_4097        214418 11 -    227762 GAAATATATCC
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     15131 11 -     20485 GCAAAGCATCT
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           7052 11 -      8775 GAAATGCATCC
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             38964  0 -     47444 C
e Sorex_araneus.JH798170.1                               17750754 3364 -  27805282 I
e Chrysochloris_asiatica.ChrAsi_scaffold_1707876              700  8 +       793 I
e Hylobates_klossii.k141_285563                               343 193 +      1026 I
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               11988 28 +    209709 CTG--GGGG--TAAG--ATAAT-AGA--GT----------------------TGCG-AA-----------------T
s Acinonyx_jubatus.LLWD01000356.1                         2034122 28 +   3721120 CCT--GGAG--ACAT--ATAAT-AGA--GC----------------------TGTG-AA-----------------T
i Acinonyx_jubatus.LLWD01000356.1                       C 0 I 1
s Acomys_cahirinus.AcoCah_scaffold_1625                    112756 11 -    189883 GCT--GGGG--AA-------AC-------------------------------------------------------
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 I 5
s Ailuropoda_melanoleuca.LNAT01000321.1                  10657464 28 +  23371972 CCT--GGAG--AAAT--ATAAT-AGA--GC----------------------TGTG-AA-----------------T
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7094811 28 -  16596857 CCT--GGAG--AAAT--ATAAT-AGA--GC----------------------TGTG-AA-----------------T
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   17033 22 -     22067 GCT---TAG--AA-------AT-GGA--GT----------------------TGTG-AA-----------------T
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   1498 28 -     60446 CCT--GGGG--TAAT--ACAAT-AGA--GT----------------------TGTG-AA-----------------T
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         2218 28 -     29318 CCT--GGGG--TAAT--ACAAT-AGA--GT----------------------TGTG-AA-----------------T
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         1153 28 +     38766 CCT--GGGG--TAAT--ACAAT-AGA--GT----------------------TGTG-AA-----------------T
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          2112 28 -     80423 CCT--GGGG--TAAT--ACAAT-AGA--GT----------------------TGTG-AA-----------------T
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            10416 28 -     18050 CCT--GAGG--AAAT--ATAAT-AGC--GT----------------------CGTT-AA-----------------T
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_1710068                                129 28 +      1555 CCT--GAGG--AAAT--ATAAT-AGC--GT----------------------CGTT-AA-----------------T
i Alouatta_caraya.k141_1710068                          N 0 C 0
s Alouatta_discolor.k141_811576                             11089 28 -     21359 CCT--GAGG--AAAT--ATAAT-AGC--GT----------------------CGTT-AA-----------------T
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                 708 28 +      2129 CCT--GAGG--AAAT--ATAAT-AGC--GT----------------------CGTT-AA-----------------T
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                         10389 28 -     10438 CCT--GAGG--AAAT--ATAAT-AGC--GT----------------------CGTT-AA-----------------T
i Alouatta_macconnelli.k141_1331706                     C 0 C 0
s Alouatta_nigerrima.k141_3537692                             141 28 +      1660 CCT--GAGG--AAAT--ATAAT-AGC--GT----------------------CGTT-AA-----------------T
i Alouatta_nigerrima.k141_3537692                       C 0 C 0
s Alouatta_palliata.k141_1316127                            10327 28 +     10410 CCT--GAGG--AAAT--ATAAT-AGC--GT----------------------CGTT-AA-----------------T
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            4134 28 -      4927 CCT--GAGG--AAAT--ATAAT-AGC--GT----------------------CATT-AA-----------------T
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_1531728                             273 28 -      1692 CCT--GAGG--AAAT--ATAAT-AGC--GT----------------------CGTT-AA-----------------T
i Alouatta_seniculus.k141_1531728                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3520264 28 +   4113121 TCT--GGAG--AAAC--ATAAT-AGA--GC----------------------TGGG-AA-----------------T
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      390456 28 -    631301 TCT--GGGA--AAAT--ATAAT-AGA--GC----------------------TGTG-AA-----------------C
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            30845 28 +     33004 TCT--GGAG--AAAT--ATAAT-AGA--GC----------------------TGTG-AA-----------------T
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 62769 27 +     78111 CCT--GAGG--AAAT--ATAAT-AGC--A-----------------------CGTG-AA-----------------T
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            5711 27 +     22701 CCT--GAGG--AAAT--ATAAT-AGC--A-----------------------CGTG-AA-----------------T
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5749668 27 +   9889416 CCT--GAGG--AAAT--ACAAT-AGC--A-----------------------CGTG-AA-----------------T
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             6257 27 -    104377 CCT--GAGG--AAAT--ATAAT-AGC--A-----------------------CGTG-AA-----------------T
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               6259 27 +     23246 CCT--GAGG--AAAT--ATAAT-AGC--A-----------------------CGTG-AA-----------------T
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     3859 12 +      5067 -----------------------AGC--TT----------------------AGTG-AA-----------------C
i Aplodontia_rufa.AprRuf_scaffold_156013                I 9 C 0
s Arctocebus_calabarensis.k141_587554                        1187 27 +      9265 CCT--CAGG--AAAT--ATGAT-AGA---C----------------------TGGG-GA-----------------T
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 8864 28 -     29036 TCT--GGAA--AAAT--ATAAT-AGA--GT----------------------TGTG-AA-----------------C
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9539527 28 +  39197703 CCT--GAGG--AGAT--ATAAT-AGC--GT----------------------CGTT-AA-----------------T
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             60798 28 +     85812 CCT--GAGG--AGAT--AAAAT-AGC--GT----------------------CGTT-AA-----------------T
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                11811 28 +     89302 CCT--GAGG--AGAT--ATAAT-AGC--GT----------------------CGTT-AA-----------------T
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             16314 28 -     58268 CCT--GAGG--AGAT--ATAAT-AGC--GT----------------------CGTT-AA-----------------T
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             64306 28 +    119057 CCT--GAGG--AGAT--ATAAT-AGC--GT----------------------CGTT-AA-----------------T
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               6277 28 -     25888 CCT--GAGG--AGAT--ATAAT-AGC--GT----------------------CGTT-AA-----------------T
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 6921 28 -     16375 CCT--GGGA--AAAT--ATAAT-AGA--CT----------------------TGTA-GA-----------------T
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                                540 28 +      6337 CCT--GGGA--AAAT--ATAAT-AGA--CT----------------------TGTA-GA-----------------T
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26380338 28 +  51448160 TCT--GGAG--AAAT--ATAA-TAGA--GT----------------------TGTG-AA-----------------T
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        5507 28 -     13118 TCT--GGAG--AAAT--ATAA-TAGA--GT----------------------TGTG-AA-----------------T
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   43334 28 -     72089 TCT--GGAG--AAAC--ACAAT-AGA--GT----------------------TGTG-AA-----------------T
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6559997 28 +   6870073 TCT--GGAG--AAAT--ATAAT-AGA--GT----------------------TGTG-AA-----------------T
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138140106 28 - 161108492 TCT--GGAG--AAAT--ATAAT-AGA--GT----------------------TGTG-AA-----------------T
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     572647 28 -    998990 TCT--GGAG--AAAT--ATAAT-AGA--GT----------------------TGTG-AA-----------------T
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136295839 28 - 158972876 TCT--GGAG--AAAT--ATAAT-AGA--GT----------------------TGTG-AA-----------------T
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1232918 28 -   1914593 TCT--GGAG--AAAT--ATAAT-AGA--GT----------------------TGTG-AA-----------------T
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               114164 28 -    171031 CCT--GAAG--AAAT--ATAAT-AGA--GT----------------------TGGG-AA-----------------T
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 13193 28 +    125063 CCT--GAAG--AAAT--ATAAT-AGA--GT----------------------TGGG-AA-----------------T
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                15236 28 -    216513 CCT--GAAG--AAAT--ATAAT-AGA--GT----------------------TGGG-AA-----------------T
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        7779 28 -    134917 CCT--GAAG--AAAT--ATAAT-AGA--GT----------------------TGGG-AA-----------------T
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3219703 28 -   8989139 CCT--GGAA--AAGT--ATAAT-AGA--GT----------------------CATG-AA-----------------T
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           397404 28 -  15254737 CCT--GGAA--AAGT--ATAAT-AGA--GT----------------------CATG-AA-----------------T
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2973140 28 +   6889770 CCT--GGAA--AAGT--ATAAT-AGA--GT----------------------CATG-AA-----------------T
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11519612 28 +  39901454 CCT--GAAG--AAAT--ATAAT-AGA--GC----------------------TGTG-AA-----------------T
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   14637 28 +     87036 CCT--GAAG--AAAT--ATAAT-AGA--GC----------------------TGTG-AA-----------------T
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11266279 28 -  35597290 CCT--GAAG--AAAT--ATAAT-AGA--GC----------------------TGTG-AA-----------------T
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11088813 28 +  39895921 CCT--GAAG--AAAT--GTAAT-AGA--GC----------------------TGTG-AA-----------------T
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16455828 28 -  44759192 CCT--GAAG--AAAT--GTAAT-AGA--GC----------------------TGTG-AA-----------------T
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21325340 28 + 157394656 TCT--GGAG--AAAC--ATAAT-AGA--GT----------------------TGGG-AA-----------------T
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135706568 28 - 157403528 TCT--GGAG--AAAC--ATAAT-AGA--GT----------------------TGGG-AA-----------------T
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          309210 28 +    345090 ACC--AGAG--AAAT--TGAAC-AGA--GG----------------------TGTG-AA-----------------T
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               59656 28 +     67245 TCT--GGAA--AAAT--ATAAT-AGA--GT----------------------TGTG-AA-----------------C
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   30865 28 +     33760 ACT--GGGG--AAAT--GTCAT-TGA--GA----------------------ATTG-AA-----------------T
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   159041 12 -    276539 -----------------------AGA--GA----------------------TATG-AA-----------------T
i Catagonus_wagneri.CatWag_scaffold_1305                I 11 C 0
s Cavia_aperea.AVPZ01000278.1                            15786736 28 -  24422027 NNN--NNNN--NNNN--NNNNN-NNN--NN----------------------NNNN-NN-----------------N
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15798672 28 -  24440124 ACT--GGTG--AAGA--GTGGT-AGA--GT----------------------CGTG-AA-----------------T
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       176863 28 +    436027 ACT--GGTG--AAGA--GTGGT-AGA--GT----------------------CGTG-AA-----------------T
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18891010 28 -  29618158 CCT--GAGG--AAAT--ATAAT-AGC--AT----------------------CGTG-AA-----------------T
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 8554 28 -     26817 CCT--GAGG--AAAT--ATAAT-AGC--AT----------------------CGTG-AA-----------------T
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                12797 28 +     25043 CCT--GAGG--AAAT--ATAAT-AGC--AT----------------------CGTG-AA-----------------T
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         8238 28 +     21754 ACC--AGAA--AAAT--TGAAC-AGA--GG----------------------TGTG-AA-----------------T
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4364017 28 +   7569818 CTT--GGAG--AAAT--ATAGT-AGA--GC----------------------TGTG-TA-----------------T
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         3774 28 -      9338 CTT--GGAG--AAAT--ATAGT-AGA--GC----------------------TGTG-TA-----------------T
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6555444 28 +   6739814 CCT--GGGG--TAAT--ACAAT-AGA--GT----------------------TGTG-AA-----------------G
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      26921 28 +     60454 CCT--GGGG--TAAT--ACAAT-AGA--GT----------------------TGTG-AA-----------------G
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          2127 28 -     21101 CCT--GGGG--TAAT--ACAAT-AGA--GT----------------------TGTG-AA-----------------G
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         59436 28 -    107033 CCT--GGGG--TAAT--ACAAT-AGA--GT----------------------TGTG-AA-----------------G
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        2326 28 -     17608 CCT--GGGG--TAAT--ACAAT-AGA--GT----------------------TGTG-AA-----------------T
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          29822 28 +     30494 CCT--GGGG--TAAT--ACCAT-AGA--GT----------------------TGTG-AA-----------------G
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          58667 28 -     59240 CCT--GGGG--TAAT--ACAGT-AGA--GT----------------------TGTG-AA-----------------T
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          2368 28 +     16677 CCT--GGGG--TAAT--ACAAT-AGA--GT----------------------TGTG-AA-----------------T
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           24527 28 +     35983 CCT--GGGG--TAAT--ACAAT-AGA--GT----------------------TGTG-AA-----------------T
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11991054 28 +  12117833 CCT--GGGG--TAAT--ACAAT-AGA--GT----------------------TGTG-AA-----------------G
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46477813 28 +  46592721 CCT--GGGG--TAAT--ACAAT-AGA--GT----------------------TGTG-AA-----------------T
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      41364 28 -     45581 CCT--GTGA--TAAT--ACAAT-AGA--GT----------------------TGTG-AA-----------------T
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       2369 28 +     35577 CCT--GGGG--TAAT--ACAAT-AGA--GT----------------------TGTG-AA-----------------G
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        2145 28 -     25661 CCT--GGGG--TAAT--ACCAT-AGA--GT----------------------TGTG-AA-----------------T
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        2124 28 -     17744 CCT--GTGA--TAAT--ACAAT-AGA--GT----------------------TGTG-AA-----------------T
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        21739 28 +     37128 CCT--GGGG--TAAT--ACAAT-AGA--GT----------------------TGTG-AA-----------------T
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           2897 28 -      6963 CCT--TGGG--AAAT--ATAAT-AGA--GA----------------------TATT-AA-----------------T
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           59204 28 -     68416 CCT--GGGA--AAAT--ATAAT-AGA--GT----------------------TTTA-GA-----------------T
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            8249 28 +     13308 CCT--GGGA--AAAT--ATAAT-AGA--GT----------------------TTTA-GA-----------------T
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             5821 28 -     18223 CCT--GAGG--AAAT--ATAAT-AGA--GT----------------------CGTG-AA-----------------T
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             22841 28 +     25473 CCT--GAGG--AAAT--ATAAT-AGA--GT----------------------CATG-AA-----------------T
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           41879 28 +     57117 CCT--GAGG--AAAT--ATAAT-AGA--GT----------------------CGTG-AA-----------------T
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          46558 28 +     54541 CCT--GAGG--AAAT--ATAAT-AGA--GT----------------------CGTG-AA-----------------T
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15961879 28 +  43084221 ATT--GGTG--AATT--ATAAT-AGA--GT----------------------AGTG-AA-----------------T
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         71365 28 +    196370 CCT--GAAG--AAAT--ATAAT-AGA--GT----------------------TGGG-AA-----------------T
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          15545 28 +     40510 CCT--GAAG--AAAT--ATAAT-AGA--GT----------------------TGGG-AA-----------------T
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15139259 28 -  15256731 CCT--GGGG--TAGT--ACAAT-AGA--GT----------------------TGTG-AA-----------------T
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      34340 28 -     53260 CCT--GGGG--TAGT--ACAAT-AGA--GT----------------------TGTG-AA-----------------T
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101144900 28 + 101219884 CCT--GGGG--TAAT--ACAAT-AGA--GT----------------------TGTG-AA-----------------T
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                16604 28 -     21363 TTT--TGGG--AAAT--ATAAT-AGA--GG----------------------AGTG-AA-----------------T
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           761907 28 +    964067 TTT--TGGG--AAAT--ACAAT-AGA--GG----------------------AGTG-AA-----------------T
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_1707876              708 19 +       793 tct--gata--caat--ttgat-gaa---------------------------------------------------
i Chrysochloris_asiatica.ChrAsi_scaffold_1707876        I 8 N 0
s Colobus_angolensis.KN985967.1                          10886669 28 +  10971483 CCT--GGGG--TAAT--ATAAT-AGA--GT----------------------TGTG-AA-----------------T
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147664834 28 + 156195979 CCT--GGGG--TAAT--ATAAT-AGA--GT----------------------TGTG-AA-----------------T
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            16819 28 +     23629 CCT--GGGG--TAAT--ATAAT-AGA--GT----------------------TGTG-AA-----------------T
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60613735 25 +  78930452 CCT--CGAC--AAAT--A---T-AGA--TT----------------------TGTG-AA-----------------T
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         39843 28 -     40477 TCT--GGAG--AAAT--ATAAT-GAA--GT----------------------TGTG-AA-----------------T
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 278720 23 -    399297 GCT--TGGG--AA-------AC-AGA--GT----------------------TGTG-AA-----------------T
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53029384 23 +  72327488 ACT--GGAG--TA-------AC-AGG--GT----------------------TGTG-GA-----------------T
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_88140              2291 27 +     11655 TCT--GGAG--AAAT--AAAA--ATA--GT----------------------TATG-AA-----------------T
i Crocidura_indochinensis.CroInd_scaffold_88140         C 0 N 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            52158 28 -     70449 CCT--GGAG--AAAT--ATAAT-AGA--TC----------------------TTTG-AA-----------------T
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 I 1
s Ctenodactylus_gundi.CteGun_scaffold_447                  208315 19 -    956709 ACT--TTCA--AGTC--ACAAG-AAA---------------------------------------------------
i Ctenodactylus_gundi.CteGun_scaffold_447               I 31 I 34
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 30867 28 -     67205 ACT--GGTG--AATT--ATAGC-AGA--AA----------------------TGTA-AA-----------------T
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                17914 28 +     26546 GTT--AGTG--AATT--ATAAT-GGA--GT----------------------TGAG-AA-----------------T
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             59003 28 -    236241 ACT--AGTG--AATT--ATAAT-ACA--GT----------------------TGGG-AA-----------------T
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          183782 28 -   6883506 CCT--TGGG--AGAT--ATAAG-AGA--GG----------------------TGTG-AA-----------------T
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16845056 28 +  31942871 CCT--GGGG--AAAT--ATAAT-GGT--GT----------------------TGTA-GA-----------------T
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80036961 26 -  96802777 TCT--GGAG--AAAT--ATA---AGA--GT----------------------TGTG-AA-----------------T
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18698931 28 -  18957592 tct--ggaa--aaat--ataat-aga--gT----------------------TGTG-AA-----------------C
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 322666 28 +    993696 CTT--GGAG--AAAT--ATAGT-AGA--GC----------------------TGTG-TA-----------------T
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   3320 28 +    151128 CTT--GGAG--AAAT--ATAGT-AGA--GC----------------------TGTG-TA-----------------T
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   157148 17 +    228994 ACT--GGTG--AATT--ATAAT-A-----------------------------------------------------
i Dinomys_branickii.DinBra_scaffold_1996                C 0 I 6
s Dipodomys_ordii.KN672545.1                              3656463 27 +   4240102 ACC--AGGA--AAAT--GTAAT-TGA--CA----------------------TAGG-AA------------------
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 28096 27 +     28912 ACC--AGGA--AAAT--GTAAT-TGA--CA----------------------TAGG-AA------------------
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                36241 20 -     73477 ------------ATT--TTGAC-AGA--GT----------------------TGTG-AA-----------------T
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22998596 28 -  44670279 TCT--TGGG--AAAT--TTAAT-TAA--GT----------------------TGTG-AA-----------------T
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 12396 28 +     24177 TCTGGA--G--AAAT--ATAAT-AGA--GT----------------------TGTA-AA-----------------T
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1491614 28 +   1727528 cct--ggag--aaat--atAAT-AGA--GT----------------------TGTG-AA-----------------T
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 I 9
s Elephantulus_edwardii.JH947210.1                        7816054 17 +  15467074 -CT--TGAG--AAAC--TT--T-AAA--G------------------------------------------------
i Elephantulus_edwardii.JH947210.1                      C 0 I 13
s Ellobius_lutescens.LOEQ01003611.1                        239933 22 -    369425 ACT--GGGG--AA-------AC-AAA--GT----------------------TGTG-AA------------------
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           7040 22 -      7838 ACT--GGGG--GA-------AA-AAA--GT----------------------TGTG-AA------------------
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85872336 28 +  99434291 CCT--GGAG--AAAT--ATAAC-AGA--GC----------------------TGCG-AA-----------------T
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4704299 28 +   6522550 TCT--GGAG--AAAT--ATAAT-AGA--GT----------------------TGTG-AA-----------------C
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5853116 28 -   7175178 CCT--GGAG--AAAT--GTAAT-AGA--GC----------------------TGTG-AA-----------------C
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13351621 28 +  41866177 CCT--GGAG--AAAT--GTAAT-AGA--GC----------------------TGTG-AA-----------------C
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          13110 28 +     92910 CCT--GGAG--AAAT--GTAAT-AGA--GC----------------------TGTG-AA-----------------C
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11534397 28 +  16010500 CCT--GGAG--AAAT--ATGGA-AGG--CT----------------------TGTG-AA-----------------T
i Erinaceus_europaeus.JH835290.1                        C 0 I 1
s Erythrocebus_patas.Contig8                             48774027 28 -  48907691 CCT--GGGG--TAAT--ACAAT-AGA--GC----------------------TGTG-AA-----------------T
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          315177 28 +    330699 TCT--GGAG--AAAT--ATAA-TAGA--GT----------------------TGTG-AA-----------------T
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             61628 28 +     89355 TCT--GGAG--AAAT--ATAA-TAGA--GT----------------------TGTG-AA-----------------T
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              5261 28 +     13586 TCT--TGGA--AAAT--ATAAT-AGA--GT----------------------TGTA-GA-----------------T
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               5192 28 -      6809 TCT--TGGA--AAAT--ATAAT-AGA--GT----------------------TGTA-GA-----------------T
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            11669 28 +     36558 CCT--TGGA--AAAT--ACAAT-AGA--GT----------------------TGTA-GA-----------------T
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             7990 28 +     60246 CCT--TGGA--AAAT--ATAAT-AGA--GT----------------------TGTA-GA-----------------T
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                11466 28 +    109717 TCT--TGGA--AAAT--ATAAT-AGA--GT----------------------TGTA-GA-----------------T
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               15852 28 +     16540 CCT--TGGA--AAAT--ATAAT-AGA--GT----------------------TGTA-GA-----------------T
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                16127 28 +     27497 CCT--TGGA--AAAT--ATAAT-AGA--GT----------------------TGTA-GA-----------------T
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           18584 28 +     26808 CCT--TGGA--AAAT--ATAAT-AGA--GT----------------------TGTA-GA-----------------T
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                33322 28 +     46535 TCT--TGGA--AAAT--ATAAT-AGA--GT----------------------TGTA-GA-----------------T
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              16046 28 -     29447 TCT--TGGA--AAAT--ATAAT-AGA--GT----------------------TGTA-GA-----------------T
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129893081 28 - 159252932 CCT--GGAG--ACAT--ATAAT-AGA--GC----------------------TGTG-AA-----------------T
i Felis_catus.CM001386.2                                C 0 I 1
s Felis_catus_fca126.CM031420.1                         129280168 28 - 158578461 CCT--GGAG--ACAT--ATAAT-AGA--GC----------------------TGTG-AA-----------------T
i Felis_catus_fca126.CM031420.1                         C 0 I 1
s Felis_nigripes.FelNig_flattened_line_8080                 21313 28 +     52776 CCT--GGAG--ACAT--ATAAT-AGA--GC----------------------TGTG-AA-----------------T
i Felis_nigripes.FelNig_flattened_line_8080             C 0 I 1
s Galago_moholi.ctg555                                     211086 27 -    847004 CCT--CGGG--AACT--ATGAT-AGC---T----------------------TGGG-AA-----------------T
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           13460 27 -     43889 CCT--CGGG--AACT--ATGAT-AGC---T----------------------TGGG-AA-----------------T
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          10532 27 +     27357 CCT--CGGG--AACT--ATGAT-AGA---T----------------------TGGG-GG-----------------T
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               156434 28 +    324696 CTT--GGGG--GAAT--ATAAT-AAA--GT----------------------TGTG-AA-----------------T
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    181408 28 -    189561 TCT--GGAG--AAAT--ATAAT-AGA--GT----------------------TGTG-CA-----------------T
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           13219 28 -     18683 ACT--TTGG--AAAT--ATAAT-ACA--GT----------------------AGTG-AA-----------------T
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               5505 28 -     14630 CCG--GGGG--TAAT--ACAAT-AGA--GC----------------------TGTG-AA-----------------T
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119652605 28 - 195582420 CCG--GGGG--TAAT--ACAAT-AGA--GC----------------------TGTG-AA-----------------T
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   77749 26 +    118900 AGC--ATGG--AAAT----AAT-ACA--GT----------------------AATG-AA-----------------T
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         2036 28 +     10286 CCT--TGGG--AAAT--ATAAT-AGA--GT----------------------TGTA-GA-----------------T
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                              513 28 -     11661 CCT--TGGG--AAAT--ATAAT-AGA--GT----------------------TGTA-GA-----------------T
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             5842 28 +     56096 CCT--TGGG--AAAT--ATAAT-AGA--GT----------------------TGTA-GA-----------------T
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        29092 28 -     42470 CCT--TGGG--AAAT--ATAAT-AGA--GT----------------------TGTA-GA-----------------T
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        45715 27 -     54384 CCT--TGGG--AAAT--ATAAT-AGA--GT----------------------TGTA-G------------------T
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              17364 28 +     53719 CCT--GGAG--AAAT--ATAAT-AGA--TC----------------------TCTG-AA-----------------T
i Helogale_parvula.HelPar_flattened_line_22962          C 0 I 1
s Hemitragus_hylocrius.HemHyl_scaffold_16669                27624 28 -     91191 TCT--GGAG--AAAC--ATAAT-AGA--GT----------------------TGTG-AA-----------------T
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2551252 12 +  31725842 -----------------------AGA--AT----------------------TAGG-AA-----------------T
i Heterocephalus_glaber.JH602058.1                      I 11 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               60982 28 +     73687 CCT--TGGG--AAAT--TTAAT-AGA--GT----------------------TGCA-AA-----------------T
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              147264 27 +    277961 TCT--GGAG--AAAT--ATAA--AGA--GT----------------------TGTG-AC-----------------T
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      278539 21 -    477199 -----------AAAC--AGAAT-ACA--GT----------------------TGTG-AA-----------------T
i Hipposideros_armiger.JXIK01001085.1                   I 5 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              7679 27 -      9143 TAT--G---AAAAAT--AGAAT-ACA--GT----------------------TGTG-AA-----------------T
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      4911 28 -   7690867 CCG--GGGG--CAGT--ACAAT-AGA--GC----------------------TGTG-AA-----------------T
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 17433 28 -     67322 CCT--GGAG--AAAT--ATAAT-AGA--GC----------------------TGTG-AA-----------------T
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 I 1
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19126 50 -    119109 ACT--GGTG--AAGT--ATGAT-AGG--TTTCATATATATATATATGAAATATGGG-AA-----------------T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_164775                              1967 28 +      2073 CCA--GGGG--CAGT--ACAAT-AGA--GC----------------------TGTG-AA-----------------T
i Hylobates_abbotti.k141_164775                         n 105 C 0
s Hylobates_agilis.k141_1878600                               229 28 -      1230 CCG--GGGG--CAGT--ACAAT-AGA--GC----------------------TGTG-AA-----------------T
i Hylobates_agilis.k141_1878600                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14624882 28 -  25970782 CCG--GGGG--CAGT--ACAAT-AGA--GC----------------------TGTG-AA-----------------T
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            2138 28 -      2977 CCG--GGGG--CAGT--ACAAT-AGA--GC----------------------TGTG-AA-----------------T
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             34041 28 -     60944 CCG--GGGG--CAGT--ACAAT-AGA--GC----------------------TGTG-AA-----------------T
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     6302 28 +     22540 CCT--GGTG--AATT--ATATT-AGA--GT----------------------TGGG-AA-----------------T
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7126014 12 +  13083262 -----------------------GGA--GT----------------------GGTG-AA-----------------T
i Ictidomys_tridecemlineatus.JH393315.1                 I 9 C 0
s Indri_indri.k141_5141390                                    554 28 -      3181 CCT--GGGA--AAAT--ATAAT-AGA--GT----------------------TGTA-GA-----------------T
i Indri_indri.k141_5141390                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               9166 26 +     17520 TCT--GGAG--AAAT--ATA---AGA--GT----------------------TGTG-AA-----------------T
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8566045 22 +  11848649 GCT---GAG--AA-------AT-AGA--GT----------------------TGTA-AA-----------------T
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               23778 26 +     37189 TCT--GGAG--AAAT--ATA---AGA--GT----------------------TGTG-AA-----------------T
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          50396 28 -    147782 CCT--GAGG--AAAT--ATAAT-AGC--AT----------------------CGTT-AA-----------------T
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   114388 28 -    115756 TCT--GAAG--AAAT--AAAAT-AGA--AT----------------------TGTG-AA-----------------C
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258407398 28 - 285822530 CCT--TGGA--AAAT--ATAAT-AGA--GC----------------------TGTA-GA-----------------T
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        24143 25 +     39228 CCT--TGGA--AAAT-----AT-AGA--GC----------------------TGTA-GA-----------------T
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            53527 25 +     63517 CCT--TGGA--AAAT-----AT-AGA--GC----------------------TGTA-GA-----------------T
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        78788 28 +    116806 CCT--TGGA--AAAT--ATAAT-AGA--GT----------------------TGTA-GA-----------------T
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     31782 25 -     33031 CCT--TGGA--AAAT-----AT-AGA--GC----------------------TGTA-GA-----------------T
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3086129 28 -   3498232 CCT--AGAG--AAAT--ATAAT-AGA--GC----------------------TGTG-AA-----------------T
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    13405 27 +     22452 -CT--TGGG--AAAT--ATAAT-AGA--GT----------------------TGTG-AA-----------------T
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            136122 26 +   3060487 TCT--GGAG--AAAT--ATA---AGA--GT----------------------TGTG-AA-----------------T
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19248538 28 +  19376315 CCT--GGGG--TAAT--ACAAT-AGA--GT----------------------TGTG-AA-----------------G
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           10833 24 +     84689 CCT--CGGG--AAAT--A---T-AGA---A----------------------TGGG-GA-----------------T
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3778583 23 +   6799190 CCT--CGGA--AA-----T-AT-AGA---A----------------------TGGG-GA-----------------T
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20594363 28 -  62548349 TCT--TGGG--AAAT--TTAGT-AAA--GT----------------------TGTG-AA-----------------T
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11088269 28 +  39895028 CCT--GAAG--AAAT--ATAAT-AGA--GC----------------------TGTG-AA-----------------T
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             20273 28 +     74745 CCT--GGGG--TAAT--ACAAT-AGA--GT----------------------TGTG-AA-----------------G
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12706730 28 +  12821369 CCT--GGGG--TAAT--ACAAT-AGA--GT----------------------TGTG-AA-----------------G
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                2372 28 -      3136 CCT--GGGG--TAAT--ACAAT-AGA--GT----------------------TGTG-AA-----------------G
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           47190 28 +     63263 CCT--GGGG--TAAT--ACAAT-AGA--GT----------------------TGTG-AA-----------------G
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                 1895 28 -      2568 CCT--GGGG--TAAT--ACAAT-AGA--GT----------------------TGTG-AA-----------------G
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 2480 28 -      7381 CCT--GGGG--TAAT--ACAAT-AGA--GT----------------------TGTG-AA-----------------G
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  45697 28 -     79256 CCT--GGGG--TAAT--ACAAT-AGA--GT----------------------TGTG-AA-----------------G
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196035804 28 + 196197964 CCT--GGGG--TAAT--ACAAT-AGA--GT----------------------TGTG-AA-----------------G
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11445974 28 +  11645122 CCT--GGGG--TAAT--ACAAT-AGA--GT----------------------TGTG-AA-----------------G
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   4644 28 -     46448 CCT--GGGG--TAAT--ACAAT-AGA--GT----------------------TGTG-AA-----------------G
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                2318 28 -     13212 CCT--GGGG--TAAT--ACAAT-AGA--GT----------------------TGTG-AA-----------------G
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 15997 28 -     55006 CCT--GGGG--TAAT--ACAAT-AGA--GT----------------------TGTG-AA-----------------G
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43841113 28 +  43892939 CCT--GGGG--TAAT--ACAAT-AGA--GT----------------------TGTG-AA-----------------G
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               17283 28 -     24607 CCT--GGGG--TAAT--ACAAT-AGA--GT----------------------TGTG-AA-----------------G
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               4649 28 -     27140 CCT--GGGG--TAAT--ACAAT-AGA--GT----------------------TGTG-AA-----------------G
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43437698 28 -  43563597 CCT--GGGG--TAAT--ACAAT-AGA--GT----------------------TGTG-AA-----------------G
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4450518 28 -   4543643 CCT--GGGG--TAAT--ACAAT-AGA--GT----------------------TGTG-AA-----------------G
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            146202 28 +    252755 Cct--ggag--aaat--aaaat-aga--gt----------------------TGTG-AA-----------------T
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             36345 28 +     58827 Cct--ggag--aaat--aaaat-aga--gt----------------------TGTG-AA-----------------T
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36873843  9 +  64221397 GCT--GGCG--AA----------------------------------------------------------------
i Marmota_marmota.CZRN01000005.1                        C 0 I 6
s Megaderma_lyra.MegLyr_scaffold_3562                       64573 30 -    234502 TAC--GGAG--AAATGCGTAAT-AGA--GT----------------------CGTG-AA-----------------T
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             1148 28 -     87323 CCT--GGAG--AAAT--ATAAC-AGA--GC----------------------TGTG-AA-----------------T
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               12880 23 +     15977 GCT--GGAG--AA-------AC-A--GAGT----------------------TGTA-AA-----------------G
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1047092 23 -  26018355 ACT--GGGG--AA-------AC-AGA--TT----------------------TGTG-AA-----------------T
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_227248                    456 24 -      1377 TCT--GGAG--AAAT--AT-----GA--GT----------------------TGTG-AA-----------------T
i Mesoplodon_bidens.MesBid_scaffold_227248              C 0 C 0
s Microcebus_murinus.CM007691.1                          16510414 28 +  47401472 CCT--GGGA--AAAT--ATAAT-AGA--GT----------------------TGTA-GA-----------------T
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  34611 16 -     48017 TCT--TAGG--AAAT--TTAAT-------------------------------------------------------
i Microgale_talazaci.MicTal_scaffold_34660              C 0 I 7
s Micronycteris_hirsuta.MicHir_scaffold_37978               22837 28 -     32043 TCT--GGAA--AAAT--ATAAT-AGA--GT----------------------TGTG-AA-----------------C
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22820231 22 -  98408828 ACT--GGAG--AA-------AC-AAA--GT----------------------TGTG-AA------------------
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8209832 28 +  10048721 TCT--GGAG--AAAT--ATAAT-AGA--GT----------------------TGTG-AA-----------------C
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            34486 28 +     45743 TCT--GGAG--AAAT--ATAAT-AGA--GT----------------------TGTG-AA-----------------C
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         2247 28 +     29742 CCT--GGGG--TAAT--ACAAT-AGA--GT----------------------TGTG-AA-----------------T
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        11645 28 -    104932 CCT--AGAG--AAAT--ATAAT-AGA--GC----------------------TGTG-AA-----------------T
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     5803 28 +      8497 CCT--GGGA--AAAT--ATAAT-AGA--TT----------------------TGTA-GA-----------------T
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 146551 26 +    154973 TCT--GGAG--AAAT--ATA---AGA--GT----------------------TGTG-AA-----------------T
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                161360 28 +    265003 TCT--GGGA--AAAT--ATAAT-TGA--GT----------------------TGTG-AA-----------------C
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  1639 28 -     19904 TCT--GGAG--AAAT--ATAAT-AGA--GT----------------------TGTG-AA-----------------T
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  145059 28 -    168139 CCT--GGAG--AAAT--ATAAT-AGA--TC----------------------TTTG-AA-----------------T
i Mungos_mungo.MunMun_flattened_line_8729               C 0 I 1
s Murina_feae.MurFea_scaffold_2254                          19671 27 -    100666 TCT--GGAG--AAAT--ATAAT-AGA--G-----------------------TGTG-AA-----------------C
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70766725 21 +  92629107 GCT--GGGG--AA-------AC-A----GT----------------------TGTG-AA-----------------T
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75489785 21 +  98207768 GCT--GGGG--AA-------AC-A----GT----------------------TGTG-AA-----------------T
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67556018 21 +  89017189 GCT--GGGG--AA-------AC-A----GT----------------------TGTG-AA-----------------T
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74330961 21 +  97876770 GCT--GGGG--AA-------AC-A----GT----------------------TGTG-AA-----------------T
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             11981 28 +     98495 ACT--GTGG--AAAT--ATGAT-ACA--GT----------------------AGTG-AA-----------------T
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4424517 28 -  28371801 CCT--GGAG--AAAT--ATAAA-AGA--GC----------------------CACG-AA-----------------T
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     90159 28 -    117718 ACT--GGCG--AATT--ATAAT-AGA--GT----------------------TGGA-AA-----------------T
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               967981 28 +   8389877 TCT--GGAG--AAAT--ATAAT-AGA--GT----------------------TGTG-AA-----------------C
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5019670 12 +   6462685 -----------------------AGA--GT----------------------TGTG-AA-----------------C
i Myotis_davidii.KB114863.1                             I 11 C 0
s Myotis_lucifugus.GL429887.1                             3465563 28 -   3747815 TCT--GGAG--AAAT--ATAAT-AGA--GT----------------------TGTG-AA-----------------C
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        10773 28 +     66751 TCT--GGAG--AAAT--ATAAG-AGA--AT----------------------TGTG-AA-----------------C
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             5173 28 -      8794 TCT--TGGG--AAAT--ATAAT-AGA--GG----------------------TGTG-AA-----------------T
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            118833 21 +    362372 GCT----GG--GA-------AC-AGA--GT----------------------TGTG-AA-----------------T
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               8752 29 +     48152 CCT--GGGG--TAAT--ATAATAAGA--GT----------------------TGTG-AA-----------------T
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4485036 28 -  14209539 CCT--AGAG--AAAT--ATAAT-AGA--GC----------------------TGTG-AA-----------------T
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3951163 26 -   4490290 TCT--GGAG--AAAT--ATA---AGA--GT----------------------TGTG-AA-----------------T
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  49448 28 +     94413 TCT--GTGA--AAAT--ATAAC-ATA--GT----------------------TGTG-AA-----------------C
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_720788                             136 28 -      1065 CCG--GGGG--CAGT--ACAAT-AGA--GT----------------------TGTG-AA-----------------T
i Nomascus_annamensis.k141_720788                       I 51 C 0
s Nomascus_concolor.k141_226614                              1440 28 -      5092 CCG--GGGG--CAGT--ACAAT-AGA--GT----------------------TGTG-AA-----------------T
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_39679                              411 28 -     17937 CCG--GGGG--CAGT--ACATT-AGA--GT----------------------TGTG-AA-----------------T
i Nomascus_gabriellae.k141_39679                        C 0 C 0
s Nomascus_siki_b.tarseq_80                             25158 28 -  18771707 CCG--GGGG--CAGT--ACAAT-AGA--GT----------------------TGTG-AA-----------------T
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  2861 28 +      4512 CCG--GGGG--TAGT--ACAAT-AGA--GT----------------------TGTG-AA-----------------T
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                31070 28 +   3668941 CCT--GAAG--AAAT--ATAAT-AGA--GC----------------------TGTG-AA-----------------T
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65567274 27 -  95554990 CCT--TGGG--AAAT--ATGAT-AAA---T----------------------TGGG-GA-----------------T
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            4000 27 +      6470 CCT--TGGG--AAAT--ATGAT-AAA---T----------------------TGGG-GA-----------------T
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65669609 27 +  89412551 CCT--CGGG--AAAT--AGGAT-AAA---T----------------------TAGG-GA-----------------T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4996153 27 -  23139505 -CT--GGGG--AAAT--ATAAT-AGA--GT----------------------TGTG-AA-----------------T
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3685698 28 +  10294119 ACT--GGTG--AAAT--ACAAT-AGA--AT----------------------TGGA-AG-----------------T
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             679702 28 -   3126709 CCT--GGAG--AAAT--ATAAT-AGA--GC----------------------TGTG-AA-----------------T
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1079845 28 +   1425656 TCT--GGAG--AAAT--ATAAT-AGA--GT----------------------TGTG-AA-----------------T
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         37137 28 +     78940 TCT--GGAG--AAAT--ATAAT-AGA--CT----------------------TGTG-AA-----------------T
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  125485 22 +    145789 ACT--GGGG--AA-------AC-AAA--GT----------------------TGTG-AA------------------
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  37270 23 +     62360 ACT--GGAG--GA-------AG-AGA--GT----------------------TGTG-GA-----------------T
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7224848 26 -   7562323 TCT--GGAG--AAAT--ATA---AGA--GT----------------------TGTG-AA-----------------T
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              57656 28 -     66828 TCT--TGGG--CAAT--TTAAT-AGA--GT----------------------TGTG-AA-----------------T
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141876439 27 + 163896628 -CT--TGGG--AAAT--ATAAT-AGA--GT----------------------TGTG-AA-----------------T
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      308355 26 -    505867 CCT--GAAG--AAAT--ACA---AGA--GC----------------------TGTG-AA-----------------T
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                         899 27 -     53940 CCT--CGGG--AACT--ATGAT-AGA---T----------------------TGGG-GA-----------------T
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18008879 27 -  38779656 CCT--CGGG--AACT--ATGAT-AGA---T----------------------TGGG-GA-----------------T
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134077415 28 - 275406953 TCT--GGAG--AAAC--ATAAT-ACA--GT----------------------TGTG-AA-----------------T
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      78630 28 +    140051 TCT--GGAG--AAAC--ATAAT-AGA--GT----------------------TGTG-AA-----------------T
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.AJFE02002857.1                                 534 45 -      1091 CCG--GGGG--TAAG--ATAAT-AGA--GT----------------------TGTG-AGGCGAGTTACCAATAGAGT
i Pan_paniscus.AJFE02002857.1                           I 11 I 69
s Pan_troglodytes.KZ622857.1                               327719 28 +    772158 CCG--GGGG--TAAG--ATAAT-AGA--GT----------------------TGTG-AA-----------------T
i Pan_troglodytes.KZ622857.1                            I 11 I 69
s Panthera_onca.PanOnc_flattened_line_1615                  34474 28 +    295523 CCT--GGAG--ACAT--ATAAT-AGA--GC----------------------TGTG-AA-----------------T
i Panthera_onca.PanOnc_flattened_line_1615              C 0 I 1
s Panthera_pardus.KV860323.1                              3638208 28 +  18214204 CCT--GGAG--ACAT--ATAAT-AGA--GC----------------------TGTG-AA-----------------T
i Panthera_pardus.KV860323.1                            C 0 I 1
s Panthera_tigris.KE721879.1                              5027883 28 -   6340057 CCT--GGAG--ACAT--AGAAT-AGA--GC----------------------TGTG-AA-----------------T
i Panthera_tigris.KE721879.1                            C 0 I 1
s Pantholops_hodgsonii.KE114631.1                         1066265 28 -   1292953 TCT--GGAG--AAAC--ATAAT-AGA--GT----------------------TGTG-AA-----------------T
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188156485 28 - 188283584 CCT--GGGG--TAAT--ACAAT-AGA--GT----------------------TGTG-AA-----------------G
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             4802 28 +      5367 CCT--GGGG--TAAT--ACAAT-AGA--GT----------------------TGTG-AA-----------------G
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47513870 28 +  47705337 CCT--GGGG--TAAT--ACAAT-AGA--GT----------------------TGTG-AA-----------------G
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 67846 28 -    104429 CCT--GGGG--TAAT--ACAAT-AGA--GT----------------------TGTG-AA-----------------G
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    6382 28 +     14967 CCT--GGGG--TAAT--ACAAT-AGA--GT----------------------TGTG-AA-----------------G
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 2241 28 -      7628 CCT--GGGG--TAAT--ACAAT-AGA--GT----------------------TGTG-AA-----------------G
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    115936 28 -    135482 CCT--GGAG--AAAT--ATAAT-AGA--GC----------------------TGTG-AA-----------------T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 I 1
s Perodicticus_ibeanus.k141_117958                           5590 27 -     23713 CCT--CGGG--AAAT--ATGAT-AGA---C----------------------TGGG-GA-----------------T
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            24903 27 -     27972 CCT--CGGG--AAAT--ATGAT-AGA---C----------------------TGGG-GA-----------------T
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      44735 28 -     45160 ACC--AGGA--AAAT--GTAAT-TGA--AC----------------------TATC-AA-----------------G
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4950521 23 -   8017169 ACT--GGGG--GA-------AG-AGA--AT----------------------TGTG-GA-----------------T
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    12605 12 -     36578 -----------------------AGA--GC----------------------TGAG-AA-----------------T
i Petromus_typicus.PetTyp_scaffold_33007                I 11 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            121453 26 -    122454 TCT--GGAG--AAAT--ATA---AGA--GT----------------------TGTG-AA-----------------T
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1987485                           2268 28 -      5908 CCT--GGGG--TAAT--ATAAT-AGA--GT----------------------TGTG-AA-----------------T
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       2892 28 -     17985 CCT--GGGG--TAAT--ATAAT-AGA--GT----------------------TGTG-AA-----------------T
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            2259 28 +      7694 CCT--GGGG--TAAT--ATAAT-AGA--GT----------------------TGTG-AA-----------------T
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26740737 28 +  26888534 CCT--GGGG--TAAT--ATAAT-AGA--GT----------------------TGTG-AA-----------------T
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            97598 27 +    112873 -CT--GGAG--AAAT--ATAAT-AGA--GT----------------------TGTG-AA-----------------C
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             44002 28 -     61926 CCT--GAAG--AAAT--ATAAT-AGA--GT----------------------TGGG-AT-----------------T
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        25387 28 +     78826 CCT--GAAG--AAAT--ATAAT-AGA--GT----------------------TGGG-AT-----------------T
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              9434 28 -     15800 CCT--GAAG--AAAT--ATAAT-AGA--GT----------------------TGGG-AT-----------------T
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        12633 28 -     16101 CCT--GAAG--AAAT--ATAAT-AGA--GT----------------------TGGG-AT-----------------T
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          5861 28 +      9673 CCT--GAAG--AAAT--ATAAT-AGA--GT----------------------TGGG-AT-----------------T
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13474861 28 -  19735023 CCT--GAAG--AAAT--ATAAT-AGA--GT----------------------TGGG-AT-----------------T
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           13764 28 -     31692 CCT--GAAG--AAAT--ATAAT-AGA--GT----------------------TGGG-AT-----------------T
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           5539 26 +     21690 TCT--GGAG--AAAT--ATA---AGA--GT----------------------TGTG-AA-----------------T
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       23104 28 +     44506 CCT--GAGG--AAAT--ATAAT-AGA--GT----------------------CGTG-AA-----------------T
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        23316 28 +     67491 CCT--GAGG--AAAT--ATAAT-AGA--GT----------------------CATG-AA-----------------T
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      13556 28 -     98129 CCT--GAGG--AAAT--ATAAT-AGA--GT----------------------CATG-AA-----------------T
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     23156 28 +    147771 CCT--GAGG--AAAT--ATAAT-AGA--GT----------------------CGTG-AA-----------------T
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        23413 28 -     23762 CCT--GAGG--AAAT--ATAAT-AGA--GT----------------------CGTG-AA-----------------T
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          3875 28 -     55515 CCT--GAGG--AAAT--ATAAT-AGA--GT----------------------CATG-AA-----------------T
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         23229 28 +    152463 CCT--GAGG--AAAT--ATAAT-AGA--GT----------------------TGTG-AA-----------------T
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                        946 28 -    119457 CCT--GAGG--AAAT--ATAAT-AGA--GT----------------------CGTG-AA-----------------T
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         12952 28 +    134592 CCT--GAGG--AAAT--ATAAT-AGA--GT----------------------CGTG-AA-----------------T
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          23539 28 -     75465 CCT--GAGG--AAAT--ATAAT-AGA--GT----------------------TGTG-AA-----------------T
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              187391 28 -    373494 CCG--GGGG--TAAT--ACAAT-AGA--TC----------------------TGTG-AA-----------------T
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19808039 28 +  19899266 CCG--GGGG--TAAT--ACAAT-AGA--TC----------------------TGTG-AA-----------------T
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               6000 26 -     15069 CCT--GGGG--TAAT--ATAA---GA--GT----------------------TGTG-AA-----------------T
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              6130 26 +     14865 CCT--GGGG--TAAT--ATAA---GA--GT----------------------TGTG-AA-----------------T
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                2094 26 -      9567 CCT--TGGG--AAAT--TTAAT-A----GT----------------------TGCA-AA-----------------T
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6848777 28 +  12164890 CCT--TGGA--AAAT--ATAAT-AGA--GT----------------------TGTA-GA-----------------T
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     16444 28 -     30946 CCT--GGGA--AAAT--ATAAT-AGA--CT----------------------TGTA-GA-----------------T
i Propithecus_coquerelli.NW_012147863.1                 T 632 I 632
s Propithecus_coronatus.k141_1353159                         3838 28 +     11805 CCC--GGGA--AAAT--ATAAT-AGA--CT----------------------TGTA-GA-----------------T
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           43176 28 +     52369 CCT--GGGA--AAAT--ATAAT-AGA--CT----------------------TGTA-GA-----------------T
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         35563 28 -     44753 CCT--GGGA--AAAT--ATAAT-AGA--CT----------------------TGTA-GA-----------------T
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            17487 28 +     27322 CCT--GGGA--AAAT--ATAAT-AGA--CT----------------------TGTA-GA-----------------T
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       17123 28 -     53241 CCC--GGGA--AAAT--ATAAT-AGA--CT----------------------TGTA-GA-----------------T
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         39387 28 -     48185 CCT--GGGA--AAAT--ATAAT-AGA--CT----------------------TGTA-GA-----------------T
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           34428 23 +     77221 GCT--GGAG--AA-------AC-A--GAGA----------------------TGTG-AA-----------------G
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            4005 28 -     27784 tct--ggaa--aaat--ataat-tga--gC----------------------TGTG-CA-----------------C
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        246827 28 -    344369 CCT--GGAG--AAAT--ATAAC-AGA--GC----------------------TGCG-AA-----------------T
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13246127 28 -  17261082 TCTGGA--G--AAAT--ATAAT-AGA--GT----------------------TGTG-AA-----------------T
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             604078 28 -   3946241 TCTGGA--G--AAAT--ATAAT-AGA--GT----------------------TGTG-AA-----------------T
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131534461 28 - 161321710 CCT--GGAG--ACAT--ATAAT-AGA--GC----------------------TGTG-AA-----------------T
i Puma_concolor.QAVW01000427.1                          C 0 I 1
s Pygathrix_cinerea.k141_374971                             30118 29 +     56732 CCT--GGGG--TAAT--ATAATAAGA--GT----------------------TGTG-AA-----------------T
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6806606 29 +   6970761 CCT--GGGG--TAAT--ATAATAAGA--GT----------------------TGTG-AA-----------------T
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             5997 29 +     18040 CCT--GGGG--TAAT--ATAATAAGA--GT----------------------TGTG-AA-----------------T
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                15924 28 +     68503 TCT--GGAG--AAAT--ATAAT-AGA--GT----------------------TGTG-AA-----------------T
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13915727 21 +  90463843 GGT--GGAG--AA-------GG-A----GT----------------------TGTG-AA-----------------T
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1787955 28 +   2252614 TGT--GGAG--AACT--AGAAT-AGA--GT----------------------TGTG-AA-----------------T
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                             409 29 -     17045 CCT--GGGG--TAAT--ATAATAAGA--GT----------------------TGTG-AA-----------------T
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206377886 29 - 206558726 CCT--GGGG--TAAT--ATAATAAGA--GT----------------------TGTG-AA-----------------T
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44856800 29 -  45163003 CCT--GGGG--TAAT--ATAATAAGA--GT----------------------TGTG-AA-----------------T
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                19467 28 +    109198 TCTGGA--G--AAAT--ATAAT-AGA--GT----------------------TGTG-AA-----------------T
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       8091 28 +     12214 TCT--GGAG--AAAC--ATAAT-AGA--GC----------------------TGTG-AA-----------------T
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15672966 28 -  43202129 CCT--GAGG--AAAT--ATAAT-AGT--GT----------------------CGCG-AA-----------------T
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        4879 28 +     34089 CCT--GAGG--AAAT--ATAAT-AGT--GT----------------------CGCG-AA-----------------T
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              4821 28 -     60842 CCT--GAGG--AAAT--ATAAT-AGT--GT----------------------CGCG-AA-----------------T
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              4914 28 +     67014 CCT--GAGG--AAAT--ATAAT-AGT--GT----------------------CGCG-AA-----------------T
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              4892 28 +     60816 CCT--GAGG--AAAT--ATAAT-AGT--GT----------------------CGCG-AA-----------------T
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 4829 28 -     76454 CCT--GAGG--AAAT--ATAAT-AGT--GT----------------------CGCG-AA-----------------T
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17341554 28 -  30362882 CCT--GAGG--AAAT--ATAAT-AGC--AT----------------------TGTG-AA-----------------T
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         20915 28 -     62485 CCT--GAGG--AAAT--ATAAT-AGC--AT----------------------TGTG-AA-----------------T
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   32436 25 -    114521 CCT--GGAG--AAAT--A---T-AGA--TT----------------------TGTG-AA-----------------T
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        3611 28 +     15331 CCT--GTGG--TAAT--ATAAT-AGA--GT----------------------TGTG-AA-----------------T
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       9004 28 +     20762 CCT--GGGG--TAAT--ATAAT-AGA--GC----------------------TGTG-AA-----------------T
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         119007 28 +    130994 CCT--GGGG--TAAT--ATAAT-AGA--GT----------------------TGTG-AA-----------------T
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           37793 28 +     46263 CCT--GGGG--TAAT--ATAAT-AGA--GC----------------------TGTG-AA-----------------T
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     30913 28 +     42640 CCT--GTGG--TAAT--ATAAT-AGA--GT----------------------TGTG-AA-----------------T
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        13953 28 +     30600 CCT--GGGG--TAAT--ATAAT-AGA--GC----------------------TGTG-AA-----------------T
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  100466 23 -    120886 ACC--GGGG--GA-------AC-AGA--GT----------------------TATG-AC-----------------T
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            19014 28 +    739146 CCC--GGAG--AAAT--ACATT-AGA--GT----------------------TGTG-AA-----------------T
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2239930 12 +   2842873 -----------------------GGA--GT----------------------GGTG-AA-----------------T
i Spermophilus_dauricus.KZ294190.1                      I 9 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             234947 28 -    276980 CCT--GGAG--AAAT--AGAAT-AGA--GC----------------------AGTG-AA-----------------T
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            27720 28 +     62062 CCT--GGAG--AAAT--ATAAT-AGA--TC----------------------TTTG-AA-----------------T
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 I 1
s Sus_scrofa.CM000824.4                                 189272019 12 + 218635234 -----------------------CGA--GA----------------------TATG-AA-----------------T
i Sus_scrofa.CM000824.4                                 I 11 C 0
s Symphalangus_syndactylus.tarseq_24                        15143 28 -  13920577 CCG--GGGG--CAGT--ACAAT-AGA--GC----------------------TGTG-AA-----------------T
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                 386 28 +     20549 TCT--GGAG--AAAT--GCAAT-GGA--GT----------------------CGTG-AG-----------------C
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               14836 28 +     45698 TCT--TGGG--AAAT--ATAAT-AGA--GG----------------------TGTG-AA-----------------T
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      807256 28 +   1148477 CTT--GGAG--AAAT--ATAAT-AGA--GC----------------------TGTG-AA-----------------T
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  57967 28 +     99546 CTT--GGAG--AAAT--ATAAT-AGA--GC----------------------TGTG-AA-----------------T
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               26684 28 +     42269 CCC--GGAA--AAAT--GGAAC-AGA--GG----------------------TGTG-AA-----------------T
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               60000 28 +     65473 CCC--GGAA--AAAT--GGAAC-AGA--GG----------------------TGTG-AA-----------------T
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194008007 28 - 194193292 CCT--GGGG--TAAT--ACAAT-AGA--GT----------------------TGTG-AA-----------------G
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  5655 28 +      6782 CCT--TGGG--AAAT--ATAAT-AGA--GA----------------------TGTG-AA-----------------T
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  135997 28 -    259118 TCT--GGAA--AAAT--TTAAT-AGA--GT----------------------TGTG-AA-----------------C
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        27109 28 +     38948 CCT--GGGG--TAAT--ATAAT-AGA--GT----------------------TGTG-AA-----------------T
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   20841 28 -     32910 CCT--GGGG--TAAT--ATAAT-AGA--GT----------------------TGTG-AA-----------------T
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      2227 28 -     12939 CCT--GGGG--TAAT--ATAAT-AGA--GT----------------------TGTG-AA-----------------T
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       2163 28 -     14244 CCT--GGGG--TAAT--ATAAT-AGA--GT----------------------TGTG-AA-----------------T
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           43562 28 -     54611 CCT--GGGG--TAAT--ATAAT-AGA--GT----------------------TGTG-AA-----------------T
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        1365 28 -     11566 CCT--GGGG--TAAT--ATAAT-AGA--GT----------------------TGTG-AA-----------------T
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     3542 28 -     15592 CCT--GGGG--TAAT--ATAAT-AGA--GT----------------------TGTG-AA-----------------T
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          2198 28 +     14371 CCT--GGGG--TAAT--ATAAT-AGA--GT----------------------TGTG-AA-----------------T
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                    479 28 +     12481 CCT--GGGG--TAAT--ATAAT-AGA--GT----------------------TGTG-AA-----------------T
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                         355 28 -     24393 CCT--GGGG--TAAT--ATAAT-AGA--GT----------------------TGTG-AA-----------------T
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       5601 28 -     28054 CCT--GGGG--TAAT--ATAAT-AGA--GT----------------------TGTG-AA-----------------T
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44660401 28 -  44834318 CCT--GGGG--TAAT--ATAAT-AGA--GT----------------------TGTG-AA-----------------T
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       2709 28 +     13828 CCT--GGGG--TAAT--ATAAT-AGA--GT----------------------TGTG-AA-----------------T
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   5318 28 +     90398 TCT--GGAG--CAAT--AAAAT-AGA--GT----------------------TGTG-AA-----------------T
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16085036 28 +  31416278 CCT--TGGG--AAAT--TTAAT-AGA--GT----------------------TATG-AA-----------------T
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2793056 26 -   3938065 TCT--GAGG--AAAT--ATAA---GA--GT----------------------TGTG-GA-----------------C
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    5259 23 +     13056 TCT--GAGA--AAAT--A------GA--GT----------------------TGTG-GA-----------------C
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69313564 26 -  96451834 TCT--GGAG--AAAT--ATA---AGA--GT----------------------TGTG-AA-----------------T
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   1465 28 +     10241 CCT--GGAG--AAAT--GAAAT-AGA--TT----------------------TGCA-AA-----------------T
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6514956 28 +  28682327 CCT--GGAG--AAAT--ATAAT-AGA--GC----------------------TGTG-AA-----------------T
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  5477 28 -     20643 CCT--TGGA--AAAT--ATAAT-AGA--GT----------------------TGTA-GA-----------------T
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             25018 28 -     33872 CCT--TGGA--AAAT--ATAAT-AGA--GT----------------------TGTA-GA-----------------T
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1524808 28 -   2331223 CCT--GGAA--AAGT--ATAAT-AGA--GT----------------------CATG-AA-----------------T
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                138450 28 -    281493 CCT--AAAG--AAAT--ATAAT-AGA--GC----------------------TGTG-AA-----------------T
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       127045 12 -    134049 -----------------------GGT--GT----------------------AGGG-AA-----------------T
i Xerus_inauris.XerIna_scaffold_7898                    I 9 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        214429 28 -    227762 CCT--GGAG--AAAT--ATAAT-AGA--GC----------------------TGTG-AA-----------------T
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     15142 22 -     20485 GCT---GAG--AA-------AT-GGA--GA----------------------TGTG-AA-----------------T
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           7063 26 -      8775 TCT--GGAG--AAAT--ATA---AGA--GT----------------------TGTG-AA-----------------T
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                701732 90 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             38964  0 -     47444 C
e Sorex_araneus.JH798170.1                               17750754 3364 -  27805282 I
e Hylobates_klossii.k141_285563                               343 193 +      1026 I
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               12016  9 +    209709 TAGTGG-------A-GG
s Acinonyx_jubatus.LLWD01000356.1                         2034151  9 +   3721120 TAGTGG-------A-GG
i Acinonyx_jubatus.LLWD01000356.1                       I 1 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    112772  9 -    189883 TGCCAG-------A-TG
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 5 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10657492  9 +  23371972 TAGTGG-------A-GG
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7094839  9 -  16596857 TAGTGG-------A-GG
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   17055  9 -     22067 TGCTGG-------A-GG
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   1526  9 -     60446 TAGTGG-------A-GG
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         2246  9 -     29318 TAGTGG-------A-GG
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         1181  9 +     38766 TAGTGG-------A-GG
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          2140  9 -     80423 TAGTGG-------A-GG
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            10444  9 -     18050 TACTAA-------A-GG
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_1710068                                157  9 +      1555 TACTAA-------A-GG
i Alouatta_caraya.k141_1710068                          C 0 C 0
s Alouatta_discolor.k141_811576                             11117  9 -     21359 TACTAA-------A-GG
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                 736  9 +      2129 TACTAA-------A-GG
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_1331706                         10417  9 -     10438 TACTAA-------A-GG
i Alouatta_macconnelli.k141_1331706                     C 0 N 0
s Alouatta_nigerrima.k141_3537692                             169  9 +      1660 TACTAA-------A-GG
i Alouatta_nigerrima.k141_3537692                       C 0 C 0
s Alouatta_palliata.k141_1316127                            10355  9 +     10410 TACTAA-------A-GG
i Alouatta_palliata.k141_1316127                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            4162  9 -      4927 TACTAA-------A-GG
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_1531728                             301  9 -      1692 TACTAA-------A-GG
i Alouatta_seniculus.k141_1531728                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3520292  9 +   4113121 TAGTGG-------A-GG
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      390484  9 -    631301 TAGTGG-------T-GG
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            30873  9 +     33004 TAGTGG-------A-GG
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 62796  9 +     78111 TACTAG-------A-GG
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            5738  9 +     22701 TACTAG-------A-GG
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5749695  9 +   9889416 TACTAG-------A-GG
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             6284  9 -    104377 TACTAG-------A-GG
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               6286  9 +     23246 TACTAG-------A-GG
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     3871  9 +      5067 TGGTGA-------A-GG
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        1214  9 +      9265 TTGCAG-------A-GG
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 8892  8 -     29036 TAGTGG-------T-G-
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9539555  9 +  39197703 TACTAG-------A-GG
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             60826  9 +     85812 TACTAG-------A-GG
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                11839  9 +     89302 TACTAG-------A-GG
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             16342  9 -     58268 TACTAG-------A-GG
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             64334  9 +    119057 TACTAG-------A-GG
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               6305  9 -     25888 TACTAG-------A-GG
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 6949  9 -     16375 TAGTAG-------A-GG
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                                568  9 +      6337 TAGTAG-------A-GG
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26380366  9 +  51448160 TAGTGG-------A-GG
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        5535  9 -     13118 TAGTGG-------A-GG
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   43362  9 -     72089 TAGTGG-------A-GG
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6560025  9 +   6870073 TAGTGG-------A-GG
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138140134  9 - 161108492 TAGTGG-------A-NG
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     572675  9 -    998990 TAGTGG-------A-GG
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136295867  9 - 158972876 TAGTGG-------A-AG
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1232946  9 -   1914593 TAGTGG-------A-GG
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               114192  9 -    171031 TACTGG-------A-GG
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 13221  9 +    125063 TACTGG-------A-GG
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                15264  9 -    216513 TACTGG-------A-GG
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        7807  9 -    134917 TACTGG-------A-GG
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3219731  9 -   8989139 TAGTGG-------A-GG
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           397432  9 -  15254737 TAGTGG-------A-GG
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2973168  9 +   6889770 TAGTGG-------A-GG
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11519640  9 +  39901454 TAATGA-------A-GG
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   14665  9 +     87036 TAATGA-------A-GG
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11266307  9 -  35597290 TAATGA-------A-GG
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11088841  9 +  39895921 TAATGA-------A-GG
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16455856  9 -  44759192 TAATGA-------A-GG
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21325368  9 + 157394656 TAGTGG-------A-GG
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135706596  9 - 157403528 TAGTGG-------A-GG
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          309238  9 +    345090 TAGTGG-------A-GG
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               59684  8 +     67245 TAGTGG-------T-G-
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   30893  9 +     33760 TAGTGG-------A-GG
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   159053  9 -    276539 TAATGG-------A-GG
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15786764  9 -  24422027 NNNNNN-------N-NN
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15798700  9 -  24440124 TGGGGG-------A-GT
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       176891  9 +    436027 TGGGGG-------A-GT
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18891038  9 -  29618158 TACTAG-------A-GG
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 8582  9 -     26817 TACTAG-------A-GG
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                12825  9 +     25043 TACTAG-------A-GG
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         8266  9 +     21754 TAGTGG-------A-GG
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4364045  9 +   7569818 TAGTGG-------A-GA
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         3802  9 -      9338 TAGTGG-------A-GA
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6555472  9 +   6739814 TAGTGG-------A-GG
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      26949  9 +     60454 TAGTGG-------A-GG
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          2155  9 -     21101 TAGTGG-------A-GG
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         59464  9 -    107033 TAGTGG-------A-GG
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        2354  9 -     17608 TAGTGG-------A-GG
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          29850  9 +     30494 TACTGG-------A-GG
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          58695  9 -     59240 TACTGG-------A-GG
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          2396  9 +     16677 TACTGG-------A-GG
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           24555  9 +     35983 TACTGG-------A-GG
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11991082  9 +  12117833 TACTGG-------A-GG
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46477841  9 +  46592721 TACTGG-------A-GG
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      41392  9 -     45581 TACTGG-------A-GG
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       2397  9 +     35577 TACTGG-------A-GG
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        2173  9 -     25661 TACTGG-------A-GG
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        2152  9 -     17744 TACTGG-------A-GT
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        21767  9 +     37128 TACTGG-------A-GG
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           2925  9 -      6963 TAATGG-------A-GG
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           59232  9 -     68416 TAGTAG-------A-GG
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            8277  9 +     13308 TAGTAG-------A-GG
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             5849  9 -     18223 TACTGG-------A-GG
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             22869  9 +     25473 TACTGG-------A-GG
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           41907  9 +     57117 TACTGG-------A-GG
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          46586  9 +     54541 TACTGG-------A-GG
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15961907  9 +  43084221 TAGGGG-------A-GG
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         71393  9 +    196370 TACTGG-------A-GG
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          15573  9 +     40510 TACTGG-------A-GG
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15139287  9 -  15256731 TAGTGG-------A-GG
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      34368  9 -     53260 TAGTGG-------A-GG
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101144928  9 + 101219884 TAGTGG-------A-GG
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                16632  9 -     21363 TATTGA-------A-GG
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           761935  9 +    964067 TATTGA-------A-GG
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10886697  9 +  10971483 TAGTGG-------A-GG
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147664862  9 + 156195979 TAGTGG-------A-GG
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            16847  9 +     23629 TAGTGG-------A-GG
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60613760  9 +  78930452 TAGGGG-------A-GG
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         39871  9 -     40477 TAGTGG-------A-GG
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 278743  9 -    399297 TATCAG-------A-GG
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53029407  9 +  72327488 TATCAG-------G-GG
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_848148              195  4 +      1327 -ATTG------------
i Crocidura_indochinensis.CroInd_scaffold_848148        N 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            52187  9 -     70449 TAGTGG-------A-GG
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 1 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  208368 15 -    956709 TAGGA-ACTCATAA-AG
i Ctenodactylus_gundi.CteGun_scaffold_447               I 34 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 30895  9 -     67205 TAGGGA-------A-GA
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                17942  9 +     26546 TGGGGG-------A-GG
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             59031  9 -    236241 TAGGGG-------A-GG
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          183810  9 -   6883506 TAGTGG-------A-GG
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16845084  9 +  31942871 TAGTAG-------A-GG
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80036987  9 -  96802777 TAGTGG-------A-GG
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18698959  9 -  18957592 TAGTGG-------T-GG
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 322694  9 +    993696 TAGTGG-------A-GG
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   3348  9 +    151128 TAGTGG-------A-GA
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   157171  9 +    228994 TGGGTG-------A-GA
i Dinomys_branickii.DinBra_scaffold_1996                I 6 C 0
s Dipodomys_ordii.KN672545.1                              3656490  9 +   4240102 TAGTGT-------C-AG
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 28123  9 +     28912 TAGTGT-------C-AG
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                36261  9 -     73477 TAGGGG-------A-GG
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22998624  9 -  44670279 TAGTGA-------A-TG
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 12424  9 +     24177 TAGTGG-------A-GG
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01152217.1                          32  9 +       245 TGGTGG-------A-GG
i Elaphurus_davidianus.JRFZ01152217.1                   n 9 n 9
s Ellobius_lutescens.LOEQ01003611.1                        239955  9 -    369425 CATCAG-------A-AA
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           7062  9 -      7838 CATCAG-------A-GA
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85872364  9 +  99434291 TAGTGG-------A-GG
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4704327  9 +   6522550 TAGGGG-------A-GG
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5853144  9 -   7175178 TAGGGA-------A-GG
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13351649  9 +  41866177 TAGGGA-------A-GG
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          13138  9 +     92910 TAGGGA-------A-GG
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11534426  7 +  16010500 -AGTGG-------A--G
i Erinaceus_europaeus.JH835290.1                        I 1 C 0
s Erythrocebus_patas.Contig8                             48774055  9 -  48907691 TAGTGG-------A-GG
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          315205  9 +    330699 TAGTGG-------A-GG
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             61656  9 +     89355 TAGTGG-------A-GG
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              5289  9 +     13586 CAGTAG-------A-GG
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               5220  9 -      6809 CAGTAG-------A-GG
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            11697  9 +     36558 CAGTAG-------A-GG
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             8018  9 +     60246 CAGTAG-------A-GG
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                11494  9 +    109717 CAGTAG-------A-GG
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               15880  9 +     16540 CAGTAG-------A-GG
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                16155  9 +     27497 CAGTAG-------A-GG
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           18612  9 +     26808 CAGTAG-------A-GG
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                33350  9 +     46535 CAGTAG-------A-GG
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              16074  9 -     29447 CAGTAG-------A-GG
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129893110  9 - 159252932 TAGTGG-------A-GG
i Felis_catus.CM001386.2                                I 1 C 0
s Felis_catus_fca126.CM031420.1                         129280197  9 - 158578461 TAGTGG-------A-GG
i Felis_catus_fca126.CM031420.1                         I 1 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 21342  9 +     52776 TAGTGG-------A-GG
i Felis_nigripes.FelNig_flattened_line_8080             I 1 C 0
s Galago_moholi.ctg555                                     211113  9 -    847004 TTGCAG-------A-GG
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           13487  9 -     43889 TTGCAG-------A-GG
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          10559  6 +     27357 TTGCAT-----------
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               156462  9 +    324696 TAGTGC-------A-GG
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    181436  9 -    189561 TAGTGG-------A-GG
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           13247  9 -     18683 GAGTGG-------A-GG
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               5533  9 -     14630 TAGTGG-------A-GG
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119652633  9 - 195582420 TAGTGG-------A-GG
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   77775  9 +    118900 GAGTCA-------A-GG
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         2064  9 +     10286 CAGTAG-------A-GG
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                              541  9 -     11661 CAGTAG-------A-GG
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             5870  9 +     56096 CAGTAG-------A-GG
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        29120  9 -     42470 CAGTAG-------A-GG
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        45742  9 -     54384 CAGTAG-------A-GG
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              17393  9 +     53719 TAGTGG-------A-GG
i Helogale_parvula.HelPar_flattened_line_22962          I 1 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                27652  9 -     91191 TAGTGG-------A-GG
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2551264  9 +  31725842 CAAGGG-------A-AG
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               61010  9 +     73687 GAGGGG-------A-GG
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              147291  9 +    277961 TAGTGG-------A-GG
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      278560  9 -    477199 TAGTGG-------A-GG
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              7706  9 -      9143 TAGTGG-------A-GG
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      4939  9 -   7690867 TAGTGG-------A-GG
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 17462  9 -     67322 TAGTGG-------A-GG
i Hyaena_hyaena.HyaHya_flattened_line_20729             I 1 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19176  9 -    119109 TAGGGG-------C-AG
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_164775                              1995  9 +      2073 TAGTGG-------A-GG
i Hylobates_abbotti.k141_164775                         C 0 C 0
s Hylobates_agilis.k141_1878600                               257  9 -      1230 TAGTGG-------A-GG
i Hylobates_agilis.k141_1878600                         C 0 I 38
s Hylobates_pileatus_b.ContigUN                                 14624910  9 -  25970782 TAGTGG-------A-GG
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            2166  9 -      2977 TAGTGG-------A-GG
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             34069  9 -     60944 TAGTGG-------A-GG
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     6330  9 +     22540 TAGGGG-------A-GG
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7126026  9 +  13083262 TAGTGC-------A-GG
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_5141390                                    582  9 -      3181 TAGTAG-------A-GG
i Indri_indri.k141_5141390                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               9192  9 +     17520 TAGTGG-------A-GG
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8566067  9 +  11848649 TGCTGG-------G-GG
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               23804  9 +     37189 TAGTGG-------A-GG
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          50424  9 -    147782 TACTAG-------A-GG
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   114416  9 -    115756 TAGTGG-------A-TG
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258407426  9 - 285822530 CAGTAG-------A-GG
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        24168  9 +     39228 TTGTAG-------A-GG
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            53552  9 +     63517 TTGTAG-------A-GG
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        78816  9 +    116806 TTGTAG-------A-GG
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     31807  9 -     33031 TTGTAG-------A-GG
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3086157  9 -   3498232 TAGTGT-------A-GG
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    13432  9 +     22452 TAGTGG-------A-GG
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            136148  9 +   3060487 TAGTGG-------A-GG
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19248566  9 +  19376315 TAGTGG-------A-GG
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           10857  9 +     84689 TTACAG-------A-GG
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3778606  9 +   6799190 TTACAG-------A-GG
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20594391  9 -  62548349 TAGTGG-------A-GG
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11088297  9 +  39895028 TAATGA-------A-GG
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             20301  9 +     74745 TAGTGG-------A-GG
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12706758  9 +  12821369 TAGTGG-------A-GG
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                2400  9 -      3136 TAGTGG-------A-AG
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           47218  9 +     63263 TAGTGG-------A-GG
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                 1923  9 -      2568 TAGTGG-------A-GG
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 2508  9 -      7381 TAGTGG-------A-GG
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  45725  9 -     79256 TAGTGG-------A-GG
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196035832  9 + 196197964 TAGTGG-------A-AG
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11446002  9 +  11645122 TAGTGG-------A-GG
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   4672  9 -     46448 TAGTGG-------A-GG
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                2346  9 -     13212 TAGTGG-------A-GG
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 16025  9 -     55006 TAGTGG-------A-GG
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43841141  9 +  43892939 TAGTGG-------A-GG
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               17311  9 -     24607 TAGTGG-------A-GG
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               4677  9 -     27140 TAGTGG-------A-GG
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43437726  9 -  43563597 TAGTGG-------A-GG
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4450546  9 -   4543643 TAGTGG-------A-GG
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            146230  9 +    252755 TAGTGG-------A-GG
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             36373  9 +     58827 TAGTGG-------A-GG
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36873858  1 +  64221397 ----------------G
i Marmota_marmota.CZRN01000005.1                        I 6 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       64603  9 -    234502 TAATGG-------A-GG
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             1176  9 -     87323 TAGTGG-------A-GG
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               12903  9 +     15977 TATCAG-------A-GG
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1047115  9 -  26018355 TATCAG-------G-GG
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_227248                    480  9 -      1377 TAGTGG-------A-GG
i Mesoplodon_bidens.MesBid_scaffold_227248              C 0 C 0
s Microcebus_murinus.CM007691.1                          16510442  9 +  47401472 TAGGAG-------A-GG
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  34634  9 -     48017 TGATGG-------A-TG
i Microgale_talazaci.MicTal_scaffold_34660              I 7 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               22865  9 -     32043 TGGTGG-------T-GT
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22820253  9 -  98408828 TATCAG-------A-GA
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8209860  9 +  10048721 TACAGG-------A-GG
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            34514  9 +     45743 TACAGG-------A-GG
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         2275  9 +     29742 TACTGG-------A-GG
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        11673  9 -    104932 TAGTGG-------A-GG
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     5831  9 +      8497 TAGGAG-------A-GG
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 146577  9 +    154973 TAGTGG-------A-GG
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                161388  9 +    265003 TAGTGG-------T-GG
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  1667  9 -     19904 TAGTGG-------A-GG
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  145088  9 -    168139 TAGTGG-------A-GG
i Mungos_mungo.MunMun_flattened_line_8729               I 1 C 0
s Murina_feae.MurFea_scaffold_2254                          19698  9 -    100666 TAGTGA-------A-TG
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70766746  9 +  92629107 GGTCAG-------A-GG
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75489806  9 +  98207768 CATCAG-------A-GG
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67556039  9 +  89017189 TGTCAG-------A-GG
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74330982  9 +  97876770 CGTCAG-------A-GG
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             12009  9 +     98495 GAGTGG-------A-GG
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4424545  9 -  28371801 TAGTGG-------A-GG
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     90187  9 -    117718 TAAGGA-------A-GA
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               968009  9 +   8389877 TAGTGA-------A-GG
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5019682  9 +   6462685 TAGTGA-------A-GG
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3465591  9 -   3747815 TAGTGA-------A-GG
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        10801  9 +     66751 TAGTGA-------A-GG
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             5201  9 -      8794 CAGTGG-------C-AG
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            118854  9 +    362372 TACTGG-------A-GG
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               8781  9 +     48152 TAGTGG-------A-GG
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4485064  9 -  14209539 TAGTGG-------A-GG
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3951189  9 -   4490290 TAGTGG-------A-GG
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  49476  9 +     94413 TAGGGG-------T-GG
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 I 427
s Nomascus_annamensis.k141_720788                             164  9 -      1065 TAGTGG-------A-GG
i Nomascus_annamensis.k141_720788                       C 0 C 0
s Nomascus_concolor.k141_226614                              1468  9 -      5092 TAGTGG-------A-GG
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_39679                              439  9 -     17937 TAGTGG-------A-GG
i Nomascus_gabriellae.k141_39679                        C 0 I 38
s Nomascus_siki_b.tarseq_80                             25186  9 -  18771707 TAGTGG-------A-GG
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  2889  9 +      4512 TAGTGG-------A-GG
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                31098  9 +   3668941 TAATGA-------A-GG
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65567301  9 -  95554990 TTGCAG-------A-GG
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            4027  9 +      6470 TTGCAG-------A-GG
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65669636  9 +  89412551 TTGCAG-------A-GG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4996180  9 -  23139505 TAGTGG-------A-TG
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3685726  9 +  10294119 TAGGGA-------A-GA
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             679730  9 -   3126709 TAGTGG-------A-GG
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1079873  9 +   1425656 TAGTGG-------A-GG
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         37165  9 +     78940 TAGTGG-------A-GG
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  125507  9 +    145789 TATCAG-------A-GA
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  37293  9 +     62360 TCTCAG-------A-GG
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7224874  9 -   7562323 TAGTGG-------A-GG
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              57684  9 -     66828 TAGTGG-------A-GG
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141876466  9 + 163896628 TAGTGG-------A-GG
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      308381  9 -    505867 TAATGA-------A-GG
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                         926  9 -     53940 TTGCAG-------A-GG
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18008906  9 -  38779656 TTGCAG-------A-GG
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134077443  9 - 275406953 TAGTGG-------A-GG
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      78658  9 +    140051 TAGTGG-------A-GG
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127574899  9 - 205426864 TAGTGG-------A-GG
i Pan_paniscus.CM003386.1                               I 28 C 0
s Pan_troglodytes.CM009241.2                            120152053  9 - 196562556 TAGTGG-------A-GG
i Pan_troglodytes.CM009241.2                            I 28 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  34503  9 +    295523 TAGTGG-------A-GG
i Panthera_onca.PanOnc_flattened_line_1615              I 1 C 0
s Panthera_pardus.KV860323.1                              3638237  9 +  18214204 TAGTGG-------A-GG
i Panthera_pardus.KV860323.1                            I 1 C 0
s Panthera_tigris.KE721879.1                              5027912  9 -   6340057 TAGTGG-------A-GG
i Panthera_tigris.KE721879.1                            I 1 C 0
s Pantholops_hodgsonii.KE114631.1                         1066293  9 -   1292953 TAGTGG-------A-GG
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188156513  9 - 188283584 TAGTGG-------A-GG
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             4830  9 +      5367 TAGTGG-------A-GG
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47513898  9 +  47705337 TAGTGG-------A-GG
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 67874  9 -    104429 TAGTGG-------A-GG
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    6410  9 +     14967 TAGTGG-------A-GG
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 2269  9 -      7628 TAGTGG-------A-GG
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    115965  9 -    135482 TAGTGG-------A-GG
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 I 1 C 0
s Perodicticus_ibeanus.k141_117958                           5617  9 -     23713 TTGCAG-------A-GG
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            24930  9 -     27972 TTGCAG-------A-GG
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      44763  9 -     45160 TATTAT-------C-AC
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4950544  9 -   8017169 TCCCAG-------A-GG
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    12617  9 -     36578 TAGGGG-------A-GG
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            121479  9 -    122454 TAGTGG-------A-GG
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1987485                           2296  9 -      5908 TAGTGG-------A-GG
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       2920  9 -     17985 TAGTGG-------A-GG
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            2287  9 +      7694 TAGTGG-------A-GG
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26740765  9 +  26888534 TAGTGG-------A-GG
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            97625  9 +    112873 TAGGGG-------A-GG
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             44030  9 -     61926 TACTGG-------A-GG
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        25415  9 +     78826 TACTGG-------A-GG
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              9462  9 -     15800 TACTGG-------A-GG
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        12661  9 -     16101 TACTGG-------A-GG
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          5889  9 +      9673 TACTGG-------A-GG
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13474889  9 -  19735023 TACTGG-------A-GG
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           13792  9 -     31692 TACTGG-------A-GG
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           5565  9 +     21690 TAGTGG-------A-GG
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       23132  9 +     44506 TACTGG-------A-GG
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        23344  9 +     67491 TACTGG-------A-GG
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      13584  9 -     98129 TACTGG-------A-GG
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     23184  9 +    147771 TACTGG-------A-GG
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        23441  9 -     23762 TACTGG-------A-GG
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          3903  9 -     55515 TACTGG-------A-GG
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         23257  9 +    152463 TACTGG-------A-GG
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                        974  9 -    119457 TACTGG-------A-GG
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         12980  9 +    134592 TACTGG-------A-GG
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          23567  9 -     75465 TACTGG-------A-GG
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              187419  9 -    373494 TAGTGG-------A-GG
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19808067  9 +  19899266 TAGTGG-------A-GG
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               6026  9 -     15069 TAGTGG-------A-GG
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              6156  9 +     14865 TAGTGG-------A-GG
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                2120  9 -      9567 GAGGGG-------A-GG
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6848805  9 +  12164890 CAGTAG-------A-GG
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     17104  9 -     30946 TAGTAG-------A-GG
i Propithecus_coquerelli.NW_012147863.1                 I 632 C 0
s Propithecus_coronatus.k141_1353159                         3866  9 +     11805 TAGTAG-------A-GG
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           43204  9 +     52369 TAGTAG-------A-GG
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         35591  9 -     44753 TAGTAG-------A-GG
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            17515  9 +     27322 TAGTAG-------A-GG
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       17151  9 -     53241 TAGTAG-------A-GG
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         39415  9 -     48185 TAGTAG-------A-GG
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           34451  9 +     77221 TATCAG-------A-GG
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            4033  9 -     27784 CGGTGG-------C-AG
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        246855  9 -    344369 TAGTGG-------A-GG
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13246155  9 -  17261082 TAGTGG-------A-GG
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             604106  9 -   3946241 TAGTGG-------A-GG
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131534490  9 - 161321710 TAGTGG-------A-GG
i Puma_concolor.QAVW01000427.1                          I 1 C 0
s Pygathrix_cinerea.k141_374971                             30147  9 +     56732 TAGTGG-------A-GG
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6806635  9 +   6970761 TAGTGG-------A-GG
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             6026  9 +     18040 TAGTGG-------A-GG
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                15952  9 +     68503 TAGTGG-------A-GG
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13915748  9 +  90463843 CATCAG-------A-GG
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1787983  9 +   2252614 TAGTGG-------A-GG
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                             438  9 -     17045 TAGTGG-------A-GG
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206377915  9 - 206558726 TAGTGG-------A-GG
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44856829  9 -  45163003 TAGTGG-------A-GG
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                19495  9 +    109198 CAGTGG-------A-GG
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       8119  9 +     12214 TAGTGA-------A-GG
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15672994  9 -  43202129 TACTAG-------A-GG
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        4907  9 +     34089 GACTAG-------A-GG
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              4849  9 -     60842 GACTAG-------A-GG
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              4942  9 +     67014 GACTAG-------A-GG
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              4920  9 +     60816 GACTAG-------A-GG
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 4857  9 -     76454 GACTAG-------A-GG
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17341582  9 -  30362882 TACTAG-------A-GG
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         20943  9 -     62485 TACTAG-------A-GG
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   32461  9 -    114521 TAGGGG-------A-GG
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        3639  9 +     15331 TAGTGG-------A-GG
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       9032  9 +     20762 TAGTGG-------A-GG
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         119035  9 +    130994 TAGTGG-------A-GG
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           37821  9 +     46263 TAGTGG-------A-GG
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     30941  9 +     42640 TAGTGG-------A-GG
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        13981  9 +     30600 TAGTGG-------A-GG
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  100489  8 -    120886 TTTCAG-------A-G-
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            19042  9 +    739146 TAGTGG-------A-GG
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17754118  1 -  27805282 T----------------
i Sorex_araneus.JH798170.1                              I 3364 I 11431
s Spermophilus_dauricus.KZ294190.1                        2239942  9 +   2842873 TAGTAC-------A-GG
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             234975  9 -    276980 TAGTGG-------A-GG
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            27749  8 +     62062 TAG-GG-------A-AG
i Suricata_suricatta.SurSur_flattened_line_20339        I 1 C 0
s Sus_scrofa.CM000824.4                                 189272031  9 + 218635234 TAATGG-------A-GG
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        15171  9 -  13920577 TAGTGG-------A-GG
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                 414  9 +     20549 TAGTAG-------A-GG
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               14864  9 +     45698 TAGTGG-------C-AG
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      807284  9 +   1148477 TAGTGG-------A-GG
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  57995  9 +     99546 TAGTGG-------A-GG
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               26712  9 +     42269 TAGTGG-------A-GG
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               60028  9 +     65473 TAGTGG-------A-GG
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194008035  9 - 194193292 TAGTGG-------A-GG
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  5683  9 +      6782 TAGTGG-------A-GG
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  136025  9 -    259118 TAGTGG-------T-GG
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        27137  9 +     38948 TAGTGG-------A-GG
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   20869  9 -     32910 TAGTGG-------A-GG
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      2255  9 -     12939 TAGTGG-------A-GG
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       2191  9 -     14244 TAGTGG-------A-GG
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           43590  9 -     54611 TAGTGG-------A-GG
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        1393  9 -     11566 TAGTGG-------A-GG
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     3570  9 -     15592 TAGTGG-------A-GG
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          2226  9 +     14371 TAGTGG-------A-GG
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                    507  9 +     12481 TAGTGG-------A-GG
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                         383  9 -     24393 TAGTGG-------A-GG
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       5629  9 -     28054 TAGTGG-------A-GG
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44660429  9 -  44834318 TAGTGG-------A-GG
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       2737  9 +     13828 TAGTGG-------A-GG
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   5346  9 +     90398 TAGTGG-------A-CG
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16085064  9 +  31416278 TAGTGG-------A-GG
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2793082  9 -   3938065 CGGTGG-------A-GG
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    5282  9 +     13056 CGGTGG-------A-GG
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69313590  9 -  96451834 TAGTGG-------A-GG
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   1493  9 +     10241 TAGGGG-------A-GT
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6514984  9 +  28682327 TAGTGG-------A-GG
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  5505  9 -     20643 TAGCAG-------A-GG
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             25046  9 -     33872 TAGCAG-------A-GG
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1524836  9 -   2331223 TAGTGG-------A-GG
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                138478  9 -    281493 TAATGA-------A-GG
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       127057  9 -    134049 TAGTGC-------A-GG
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        214457  9 -    227762 TAGTGG-------A-GG
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     15164  9 -     20485 GGCTGG-------A-GG
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           7089  9 -      8775 TAGTGG-------A-GG
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                701732 90 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             38964  0 -     47444 C
e Elephantulus_edwardii.JH947210.1                        7816071 13 +  15467074 I
e Hylobates_klossii.k141_285563                               343 193 +      1026 I
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               12025 38 +    209709 T---GGATCACCAAT-----ACT--------GGCCAAA-T--AAAGCC-CGCT-AACAT
s Acinonyx_jubatus.LLWD01000356.1                         2034160 41 +   3721120 TGGTGGATAGGCAAT-----GCT--------GGGTGAC-T--AAGGAC-TGTT-AACAT
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    112781 36 -    189883 C---AGAAAGGTGAC-----ACT--------GTTCAAC-T--AA-A-T-GAAA-AAAAT
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10657501 38 +  23371972 T---GGATAGGCAAT-----GCT--------GGGTGAC-T--TAGGAA-TGTT-AACAT
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7094848 38 -  16596857 T---GGGTAGGCAAT-----GCA--------GGGTGAC-T--AAGGGC-Tgtt-aacat
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   17064 37 -     22067 TG--G-GTAGGGAAT-----TCT--------GGTCAAC-C--ACAG-C-TACT-AATGT
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   1535 38 -     60446 T---GGATCCCCAGT-----ACT--------GGGCAGC-T--AAAGCC-TGCT-AACAT
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         2255 38 -     29318 T---GGATCCCCAGT-----ACT--------GGGCAAC-T--AAAGCC-TGCT-AACAT
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         1190 38 +     38766 T---GGATCCCCAGT-----ACT--------GGGCAAC-T--AAAGCC-TGCT-AACAT
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          2149 38 -     80423 T---GGATCCCAAGT-----ACT--------GGGCAAC-T--AAAGCC-TGCT-AACAT
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            10453 37 -     18050 T---GGATCAGCAAT-----GCT--------GGGCAAC-T--AAA-CC-TGCT-AACAT
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_1710068                                166 37 +      1555 T---GGATCAGCAAT-----GCT--------GGGCAAC-T--AAA-CC-TGCT-AACAT
i Alouatta_caraya.k141_1710068                          C 0 C 0
s Alouatta_discolor.k141_811576                             11126 37 -     21359 T---GGATCAGCAAT-----GCT--------GGGCAAC-T--AAA-CC-TGCT-AACAT
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                 745 37 +      2129 T---GGATCAGCAAT-----GCT--------GGGCAAC-T--AAA-CC-TGCT-AACAT
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_2177643                           129 37 -      1868 T---GGATCAGCAAT-----ACT--------GGGCAAC-T--AAA-CC-CGCT-AACAT
i Alouatta_macconnelli.k141_2177643                     N 0 C 0
s Alouatta_nigerrima.k141_3537692                             178 37 +      1660 T---GGATCAGCAAT-----ACT--------GGGCAAC-T--AAA-CC-TGCT-AACAT
i Alouatta_nigerrima.k141_3537692                       C 0 C 0
s Alouatta_palliata.k141_1316127                            10364 37 +     10410 T---GGATCAGCAAT-----GCT--------GGGCAAC-T--AAA-CC-TGCT-AACAT
i Alouatta_palliata.k141_1316127                        C 0 n 0
s Alouatta_puruensis.k141_1284840                            4171 37 -      4927 T---GGATCAGCAAT-----GCT--------GGGCAAC-T--AAA-CC-TGCT-AACAT
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_1531728                             310 37 -      1692 T---GGATCAGCAAT-----GCT--------GGGCAAC-T--AAA-CC-TGCT-AACAT
i Alouatta_seniculus.k141_1531728                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3520301 38 +   4113121 T---GGATGGGCAAT-----GCT--------GGGTGAC-T--CAAAGC-TGTT-AACAT
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      390493 45 -    631301 G---GGACAGATGAT-----GCTACCCT-TTAGTTGAC-T--AAAGGC-TGTT-AATAT
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            30882 38 +     33004 T---GGATGGGCAAT-----GCT--------GGGTGAC-T--CAAGGC-TGTT-AACAT
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 62805 37 +     78111 T---GGATCAGCAAT-----GCT--------GGGCAAC-T--AAA-CC-TGCT-AACAT
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            5747 37 +     22701 T---GGATCAGCAAT-----GCT--------GGTCAAC-T--AAA-CC-TGCT-AACAT
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5749704 37 +   9889416 T---GGATCAGCAAT-----GCT--------GGGCAAC-T--AAA-CC-TGCT-AACAT
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             6293 37 -    104377 T---GGATCAGCAAT-----GCT--------GGGCAAC-T--AAA-CC-TGCT-AACAT
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               6295 37 +     23246 T---GGATCAGCAAT-----GCT--------GGGCAAC-T--AAA-CC-TGCT-AACAT
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     3880 21 +      5067 A---GGGTAGACAAC-----ACT--------GAGAAA----------------------
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 I 2
s Arctocebus_calabarensis.k141_587554                        1223 38 +      9265 T---GGATAAACAAT-----GTG--------AGACCAC-T--AGACTA-TGTC-AACAT
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 8900 43 -     29036 -----GGCAGACAAT-----GATACCAT-TTAGATGAC-T--AAAGGC-TATT-AATAT
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9539564 37 +  39197703 T---GGATCAGCAAT-----GCT--------GGGCAAC-T--AAA-CC-TGCT-AACAT
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             60835 37 +     85812 T---GGATCAGCAAT-----GCT--------GGGCAAC-T--AAA-CC-TGCT-AACAT
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                11848 37 +     89302 T---GGATCAGCAAT-----GCT--------GGGCAAC-T--AAA-CC-TGCT-AACAT
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             16351 37 -     58268 T---GGATCAGCAAT-----GCT--------GGGCAAC-T--AAA-CC-TGCT-AACAT
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             64343 37 +    119057 T---GGATCAGCAAT-----GCT--------GGGCAAC-T--AAA-CC-TGCT-AACAT
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               6314 37 -     25888 T---GGATCAGCAAT-----GCT--------GGGCAAC-T--AAA-CC-TGCT-AACAT
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 6958 38 -     16375 G---GGTTTAAAAAT-----GCT--------GGACAAA-A--AGAGGA-TGTC-TACAT
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                                577 38 +      6337 G---GGTTTAAAAAT-----GCT--------GGACAAA-A--AGAGGA-TGTC-TACAT
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26380375 38 +  51448160 C---GGACGGGCAAT-----GCT--------GGGTGAC-T--CAAGGC-Tgtt-aacat
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        5544 38 -     13118 C---GGACGGGCAAT-----GCT--------GGGTGAC-T--CAAGGC-TGTT-AACAT
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   43371 38 -     72089 T---GGATGGGCAAT-----GCT--------GGGTGAC-T--CAAGGC-TGTT-AACAT
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6560034 38 +   6870073 T---AGATGGGCAAT-----GCT--------GGGTGAC-T--CAAGGC-TGTT-TTCAG
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138140143 38 - 161108492 T---GGATGGGCAAT-----GCT--------GGGTGAC-T--CAAGGC-TGTT-ATCAG
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     572684 38 -    998990 T---GGATGGGCAAT-----GCT--------GGGTGAC-T--CAAGGC-TGTT-TTCAG
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136295876 38 - 158972876 T---GGATGGGCAAT-----GCT--------GGGTGAC-T--CAAGGC-TGTT-ATCAG
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1232955 38 -   1914593 T---GGATGGGCAAT-----GCT--------GGGTAAC-T--CAAGGT-TGTT-AACAG
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               114201 37 -    171031 T---GGATCAGCAAT-----GCT--------GGGCAAC-T--AAA-CT-TGCT-AACAT
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 13230 37 +    125063 T---GGATCAGCAAT-----GCT--------GGGCAAC-T--AAA-CT-TGCT-AACAT
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                15273 37 -    216513 T---GGATCAGCAAT-----GCT--------GGGCAAC-T--AAA-CT-TGCT-AACAT
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        7816 37 -    134917 T---GGATCAGCAAT-----GCT--------GGGCAAC-T--AAA-CT-TGCT-AACAT
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3219740 38 -   8989139 T---GGATGGGCAAT-----GCT--------AGGTGAG-T--AAACGC-TGTT-AACAT
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           397441 38 -  15254737 T---GGATGGGCAAT-----GCT--------AGGTGAG-T--AAACGC-TGTT-AACAT
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2973177 38 +   6889770 T---GGATGGGCAAT-----GCT--------AGGTGAG-T--AAACGC-TGTT-AACAT
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11519649 38 +  39901454 T---GAATAGGAAAT-----GCT--------GGGTGAC-T--AAGAGC-TATT-AATAT
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   14674 38 +     87036 T---GAATAGGAAAT-----GCT--------GGGTGAC-T--AAGAGC-TATT-AATAT
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11266316 38 -  35597290 T---GAATAGGAAAT-----GCT--------GGGTGAC-T--AAGagc-tatt-aatat
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11088850 38 +  39895921 T---GAATAGGAAAT-----GCT--------GGGTGAC-T--AAGagc-tatt-aatat
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16455865 38 -  44759192 T---GAATAGGAAAT-----GCT--------GGGTGAC-T--AAGagc-tatt-aatat
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21325377 38 + 157394656 T---GGATGGGCAAT-----GCT--------GGGTGAC-T--CAAAGC-TGTT-AACAT
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135706605 38 - 157403528 T---GGATGGGCAAT-----GCT--------GGGTGAC-T--CAAAGC-TGTT-AACAT
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          309247 38 +    345090 T---GGAGAAGTAAT-----GCT--------GGGCAAT-T--AAAGGC-AGTT-CACTT
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               59692 42 +     67245 ------GCAGATAGT-----GCTACCAT-TTAGATGAC-T--GCAGGC-TGTT-AATGT
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   30902 38 +     33760 T---GGGAAAGAAAT-----GCT--------GGTCAGC-T--AAAGGT-AGAT-AACCT
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   159062 38 -    276539 T---GGATGGGCAAT-----GCT--------CAATCGC-A--AAAGGC-TGTT-AACAT
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15786773 38 -  24422027 N---NNNNNNNNNNN-----GTC--------ATTCAAC-T--AAAGGC-TATT-CACAT
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15798709 38 -  24440124 T---AGACTGGCAAT-----GTC--------ATTCAAC-T--AAAGGC-TATT-CACAT
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       176900 38 +    436027 T---AGACTGGCAAT-----GTC--------ATTCAAC-T--AAAGGC-TATT-CACAT
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18891047 37 -  29618158 T---GGATCAGCAAT-----GCT--------GGGCAAC-T--AAA-CC-TGCT-AACAT
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 8591 37 -     26817 T---GGATCAGCAAT-----GCT--------GGGCAAC-T--AAA-CC-TGCT-AACAT
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                12834 37 +     25043 T---GGATCAGCAAT-----GCT--------GGGCAAC-T--AAA-CC-TGCT-AACAT
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         8275 38 +     21754 T---GGAGAAGCAAT-----GCT--------GGGTAAT-T--AAAGGC-AGTT-CATAT
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4364054 38 +   7569818 T---AGAGAGGCAAT-----GCT--------GGCTGAC-T--AAGGGc-tatt-aacat
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         3811 38 -      9338 T---AGAGAGGCAAT-----GCT--------GGCTGAC-T--AAGGGC-TATT-AACAT
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6555481 38 +   6739814 T---GGATCCCCAGT-----ACT--------GGGCAAC-T--AAAGCC-TGCT-AACAT
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      26958 38 +     60454 T---GGATCCCCAGT-----ACT--------GGGCAAC-T--AAAGCC-TGCT-AACAT
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          2164 38 -     21101 T---GGATCCCCAGT-----ACT--------GGGCAAC-T--AAAGCC-TGCT-AACAT
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         59473 38 -    107033 T---GGATCCCCAGT-----ACT--------GGGCAAC-T--AAAGCC-TGCT-AACAT
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        2363 38 -     17608 T---GGATCCCCAGT-----ACT--------GGGCAAC-T--AAAGCC-TGCT-AACAT
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          29859 38 +     30494 T---GGATCCCCAGT-----ACT--------GGGCAAC-T--AAAGCC-TGCT-AACAT
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          58704 38 -     59240 T---GGATCCCCAGT-----ACT--------GGGCAAC-T--AAAGCC-TGCT-AACAT
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          2405 38 +     16677 T---GGATCCCCAGT-----ACT--------GGGCAAC-T--ACAGCC-TGCT-AACAT
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           24564 38 +     35983 T---GGATCCCCAGT-----ACT--------GGGCAAC-T--AAAGCC-TGCT-AACAT
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11991091 37 +  12117833 T---GGATCCCCAGT-----ACT--------GGGCAAC-T--AA-GCC-TGCT-AACAT
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46477850 38 +  46592721 T---GGATCCCCAGT-----ACT--------GGGCAAC-T--AAAGCC-TGCT-AACAT
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      41401 38 -     45581 T---GGATCCCCAGT-----ACT--------GGGCAAC-T--AAAGCC-TGCT-AACAT
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       2406 38 +     35577 T---GGATCCCCAGT-----ACT--------GGGCAAC-T--AAAGCC-TGCT-AACAT
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        2182 38 -     25661 T---GGATCTCCAGT-----ACT--------GGGCAAC-T--AAAGCC-TGCT-AACAT
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        2161 38 -     17744 T---GGATCCCCAGT-----ACT--------GGGCAAC-T--AAAGCC-TGCT-AACAT
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        21776 38 +     37128 T---GGATCCCCAGT-----ACT--------GGGCAAC-T--AAAGCC-TGCT-AACAT
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           2934 38 -      6963 T---GGATAGGCAAT-----GCT--------GGGCTAC-T--AAAGGC-TGTT-AACAT
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           59241 38 -     68416 T---GGTTTAAAAAT-----GCT--------GGGCAAC-T--AGAGGG-TGTC-TACAT
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            8286 38 +     13308 T---GGTTTAAAAAT-----GCT--------GGGCAAC-T--AGAGGG-TGTC-TACAT
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             5858 37 -     18223 C---AGATCAGCAAT-----GCT--------GGGCAAC-T--AAA-CC-TGCT-AACAT
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             22878 37 +     25473 C---AGATCAGCAAT-----GCT--------GGGCAAC-T--AAA-CC-TGCT-AACAT
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           41916 37 +     57117 C---AGATCAGCAAT-----GCT--------GGGCAAC-T--AAA-CC-TGCT-AACAT
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          46595 37 +     54541 C---AGATCAGCAAT-----GCT--------GGGCAAC-T--AAA-CC-TGCT-AACAT
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15961916 38 +  43084221 T---TGATAGGCAAT-----GCC--------ACTCAAT-G--AAGGGC-GATT-TACAT
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         71402 37 +    196370 T---GGATCAGCAAT-----GCT--------GGGCAAC-T--AAA-CT-TGCT-AACAT
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          15582 37 +     40510 T---GGATCAGCAAT-----GCT--------GGGCAAC-T--AAA-CT-TGCT-AACAT
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15139296 38 -  15256731 T---GGATCCCCAGT-----ACT--------GGGCAAC-T--AAAGCC-TGCT-AACAT
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      34377 38 -     53260 T---GGATCCCCAGT-----ACT--------GGGCAAC-T--AAAGCC-TGCT-AACAT
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101144937 38 + 101219884 T---GGATCCCCAGT-----ACT--------GGGCAAC-T--AAAGCC-TGCT-AACAT
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                16641 37 -     21363 T---GGACAGGCAAT-----GCT--------GG-CAAC-T--AAAGGC-TGTT-AACAT
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           761944 37 +    964067 T---GGACAGGCAAT-----GCT--------GG-CAAC-T--AAAGGC-TGTT-AACAT
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10886706 38 +  10971483 T---GGATCCCCAGT-----GCT--------GGGCAAC-T--AAAGCC-TGCT-GACAT
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147664871 38 + 156195979 T---GGATCCCCAGT-----GCT--------GGGCAAC-T--AAAGCC-TGCT-GACAT
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            16856 38 +     23629 T---GGATCCCCAGT-----GCT--------GGGCAAC-T--AAAGCC-TGCT-GACAT
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60613769 37 +  78930452 T---GGACAGGCAAT-----GCT--------G-GTAAC-T--GAAAGC-TGTT-AGCAT
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         39880 22 -     40477 T---AGACAGGCAAT-----GCT--------AGGTGAC---------------------
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 I 16
s Cricetomys_gambianus.CriGam_scaffold_949                 278752 37 -    399297 T---GGGAAGGTGAT-----ATT--------GGTCAAA-T--AAAG-G-GAGT-AATAT
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53029416 35 +  72327488 T---AAGG--GTGAC-----ACT--------GGTCAAT-G--AAAg-t-gaag-aatat
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            52196 41 -     70449 TGGTGGATAGGCAAT-----GCT--------GGGTGAG-T--AAGGGC-TGAT-AACAT
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  208383 38 -    956709 T---GAGAAAGCAAT-----GCT--------GGTCTGC-T--CATGGC-TATT-AACAT
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 30904 32 -     67205 T---GGATAGGCAGT-----AAC--------ACTTTGC-T--AATGGC-TAT-------
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                17951 38 +     26546 T---GACTAGGCAAT-----GTC--------ACTCAAC-T--AAATGC-TATT-GACAA
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             59040 38 -    236241 T---GGATAGGTAAT-----GCC--------ACTCAAC-T--AAAGGC-TATT-AACAT
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          183819 38 -   6883506 T---AGATAGGCAAT-----GCT--------GGACAAC-T--AAAAAC-TGTT-AACAT
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16845093 38 +  31942871 T---GGATAAAAAAT-----GCT--------GGGCAAC-C--AGAGGA-TGTC-AACAT
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80036996 38 -  96802777 T---GGATGGGCAAT-----GCT--------GGGTGAC-T--CAAGGC-TGTT-AACAT
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18698968 45 -  18957592 C---TGATAGGCAAT-----GCTACTCT-TTAGATGAC-T--AAAGAC-TGTT-AATAT
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 322703 38 +    993696 T---AGAGAGGCAAT-----GCT--------GGCTGAG-T--AAGGGC-tatt-aacat
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   3357 38 +    151128 T---AGAGAGGCAAT-----GCT--------GGCTGAC-T--AAGGGC-TATT-AACAT
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   157180 38 +    228994 T---TGATAGGCAAT-----GCC--------ACTCAAC-T--AAATGC-TATT-CACAT
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3656499 38 +   4240102 T---GGTAAAGGAAC-----GCT--------GGTCAGC-T--AAGGGC-TAGT-AGCAT
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 28132 38 +     28912 T---GGTAAGGGAAT-----GCT--------GGTCAGC-T--AAGGGC-TAGT-AGCAT
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                36270 37 -     73477 T---GGATAATCAGG-----GTC--------ACTCAAC-C--TAAGGC-TACT-CACA-
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22998633 39 -  44670279 T---AAATGGACCAT-----GCT--------GGATGCC-T--AAAGAG-TGTTTGTTAT
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 12433 40 +     24177 T---GAATAGGCTAT-----GCT--------AGCTGAC-TATAAAGGC-TGTT-AACAT
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1491651 38 +   1727528 T---GGATGGGCAAT-----GCT--------GGGTGAC-T--CAAGGC-TGTT-AACAT
i Elaphurus_davidianus.JRFZ01086400.1                   I 9 C 0
s Ellobius_lutescens.LOEQ01003611.1                        239964 37 -    369425 T---CGGAAAATGAC-----ACA--------AGTCAAC-T--AAAG-T-GAGT-AACAC
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           7071 37 -      7838 C---GGGAAAGTGAC-----ACA--------AGTCAAC-T--AAAG-T-GAGT-AATAC
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85872373 38 +  99434291 T---GGATAGGCTAT-----GCT--------GGGTGAC-T--AAGGGC-Tgtt-aacat
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4704336 46 +   6522550 T---GGATAGACAAT-----GCAA-GATGTTAGGCAGA-G-GAATGGC-TGTG-AATAT
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5853153 38 -   7175178 T---AGAAAGGCCGT-----GAT--------GGGTGAC-T--AAGGGC-TGTG-AACAT
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13351658 38 +  41866177 T---AGAAAGGCCGT-----GAT--------GGGTGAC-T--AAGGGC-TGTG-AACAT
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          13147 38 +     92910 T---AGAAAGGCCGT-----GAT--------GGGTGAC-T--AAGGGC-TGTG-AACAT
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11534433 38 +  16010500 T---GGCTAGGCAGT-----GCT--------GGCTGCC-C--AAAGGC-TGTT-AATGT
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48774064 38 -  48907691 T---GGATCCCCAGT-----ACT--------GGGCAAC-T--AAAGCC-TGCT-AACAT
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          315214 38 +    330699 T---GGATGGGCAAT-----GCT--------GGGTGAC-T--CAAGGC-TGTT-AACAT
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             61665 38 +     89355 T---GGATGGGCAAT-----GCT--------GGGTGAC-T--CAAGGC-TGTT-AACAT
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              5298 22 +     13586 T---GGTTTAAAAAT-----GCT--------GGGCAAT---------------------
i Eulemur_albifrons.k141_715837                         C 0 I 11
s Eulemur_collaris.k141_311830                               5229 22 -      6809 T---GGTTTAAAAAT-----GCT--------GGGCAAT---------------------
i Eulemur_collaris.k141_311830                          C 0 I 11
s Eulemur_coronatus.k141_3240342                            11706 22 +     36558 T---GGTTTAAAAAT-----GCT--------GGGCAAC---------------------
i Eulemur_coronatus.k141_3240342                        C 0 I 11
s Eulemur_flavifrons.k141_903901                             8027 22 +     60246 T---GGTTTAAAAAT-----GCT--------GGGCAAC---------------------
i Eulemur_flavifrons.k141_903901                        C 0 I 11
s Eulemur_fulvus.k141_653297                                11503 22 +    109717 T---GGTTTAAAAAT-----GCT--------GGGCAAT---------------------
i Eulemur_fulvus.k141_653297                            C 0 I 11
s Eulemur_macaco.k141_1341545                               15889 22 +     16540 T---GGTTTAAAAAT-----GCT--------GGGCAAT---------------------
i Eulemur_macaco.k141_1341545                           C 0 I 11
s Eulemur_mongoz.k141_825972                                16164 22 +     27497 T---GGTTTAAAAAT-----GCT--------GGGCAAC---------------------
i Eulemur_mongoz.k141_825972                            C 0 I 11
s Eulemur_rubriventer.k141_411740                           18621 22 +     26808 T---GGTTTAAAAAT-----GCT--------GGGCAAC---------------------
i Eulemur_rubriventer.k141_411740                       C 0 I 11
s Eulemur_rufus.k141_1620292                                33359 22 +     46535 T---GGTTTAAAAAT-----GCT--------GGGCAAT---------------------
i Eulemur_rufus.k141_1620292                            C 0 I 11
s Eulemur_sanfordi.k141_186399                              16083 22 -     29447 T---GGTTTAAAAAT-----GCT--------GGGCAAT---------------------
i Eulemur_sanfordi.k141_186399                          C 0 I 11
s Felis_catus.CM001386.2                                129893119 41 - 159252932 TGGTGGATAGGCAAC-----GCT--------GGGTGAC-T--AAGGAC-TGTT-AACAT
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129280206 46 - 158578461 TGGTGGATAGGCAATGCTGGGCT--------GGGTGAC-T--AAGGAC-TGTT-AACAT
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 21351 41 +     52776 TGGTGGATAGGCAAT-----GCT--------GGGTGAC-T--AAGGAC-TGTT-AACAT
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Galago_moholi.ctg555                                     211122 33 -    847004 T---GGATAAACAAT-----GTG--------GGCCAGC-T--AGACTA-TGTC------
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           13496 33 -     43889 T---GGATAAACAAT-----GTG--------GGCCAGC-T--AGACTA-TGTC------
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          10565 38 +     27357 T---GGATAAACAAT-----GTG--------GGCCAGC-T--AGACGA-TGTC-AACAC
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               156471 38 +    324696 T---GGATAGGCAAT-----GCT--------GGGCCAC-T--AAAGGC-TGTT-AACAT
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    181445 38 -    189561 T---GGATGGGCAAA-----GCT--------GGGTGAC-T--CAAGGC-TGTT-AACAT
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           13256 36 -     18683 T----GATAGAAAAT-----ACT--------GGTAAAC-T--AAAG-C-TATT-AACAT
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               5542 38 -     14630 C---GGATCACCAAT-----ACT--------GGGCAAC-T--AAAGCC-CGCT-AACAT
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119652642 38 - 195582420 C---GGATCACCAAT-----ACT--------GGGCAAC-T--AAAGCC-CGCT-AACAT
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   77784 37 +    118900 T----GATAGGAAAT-----GCT--------GGTTAAC-T--AAAGAA-TATT-AACAT
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         2073 35 +     10286 T---GGTGTAAAAAT-----GCT--------GGGCAAC-T--AGAGGA-TACC-AA---
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                              550 35 -     11661 T---GGTGTAAAAAT-----GCT--------GGGCAAC-T--AGAGGA-TACC-AA---
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             5879 35 +     56096 T---GGTGTAAAAAT-----GCT--------GGGCAAC-T--AGAGGA-TACC-AA---
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        29129 35 -     42470 T---GGTGTAAAAAT-----GCT--------GGGCAAC-T--AGAGGA-TACC-AA---
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        45751 35 -     54384 T---GGTGTAAAAAT-----GCT--------GGGCAAC-T--AGAGGA-TACC-AA---
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              17402 41 +     53719 TGGTGGATAGGCAAT-----GCT--------GGGTGAA-T--AAGGGC-TGAT-AACAT
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                27661 38 -     91191 T---AGATGGGCAAT-----GCT--------GGGTGAC-T--CAAGGC-TGTT-AACAT
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2551273 38 +  31725842 T---GAATAGGCAAT-----GCC--------AGCAAAC-T--AAAGG-CTatt-aacat
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               61019 38 +     73687 T---AGACATGCAAC-----ACT--------GAGTGAC-T--AAAGAC-TGTT-AGTAT
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              147300 38 +    277961 T---AGATGGGCAAT-----GCT--------GAGTGAC-T--CAAGGC-TGTT-AACAT
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      278569 38 -    477199 T---GGATAGGCAAT-----GCC--------AGGTGA--T-GAAAGGC-CATT-AACAT
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              7715 38 -      9143 T---AGATAGGCAAT-----GCC--------AGATGA--T-GAAAGGC-CTTT-AACAT
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      4948 38 -   7690867 T---GGATCACCAAC-----ACT--------GGGCAAC-T--AAAGCC-AGCT-AACAT
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 17471 41 -     67322 TGGTGGATAGGCAAT-----GCT--------GGGCGAC-T--AAGGGC-TAAT-AATAT
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19185 37 -    119109 T---GGATAGGCAAT-----GTC--------ACTCA-C-T--AACGGC-TGCT-CACAC
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_164775                              2004 38 +      2073 C---GGATCACCAAC-----ACT--------GGGCAAC-T--AAAGCC-AGCT-AACAT
i Hylobates_abbotti.k141_164775                         C 0 C 0
s Hylobates_agilis.k141_1621614                                41 38 -      1673 C---GGATCACCAAC-----ACT--------GGGCAAC-T--AAAGCC-AGCT-AACAT
i Hylobates_agilis.k141_1621614                         n 38 I 61
s Hylobates_pileatus_b.ContigUN                                 14624919 38 -  25970782 C---GGATCACCAAC-----ACT--------GGGCAAC-T--AAAGCC-AGCT-AACAT
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            2175 38 -      2977 C---AGATCACCAAC-----ACT--------GGGCAAC-T--AAAGCC-AGCT-AACAT
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             34078 38 -     60944 C---GGATCACCAAC-----ACT--------GGGCAAC-T--AAAGCC-AGCT-AACAT
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     6339 38 +     22540 T---GAATAGGCAAT-----GCC--------AGTCCAC-T--AAAGGC-AATT-AACAT
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7126035 38 +  13083262 T---GGGTAGGCAAT-----GAT--------GATCAAT-G--AAAGGC-TACT-CACAT
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_5141390                                    591 38 -      3181 T---GGTTTAAAAAT-----GCT--------GGGCAAC-T--AGAGGA-TGTC-TACAT
i Indri_indri.k141_5141390                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               9201 38 +     17520 T---GGATGGGCAAT-----GCT--------GGGTGAC-T--CAAGGC-TGTT-AACAT
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8566076 37 +  11848649 T--AG-GTAGAGAAC-----TCT--------GGTCAAC-C--ACAG-C-TACC-AATGT
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               23813 38 +     37189 T---GGATGGGCAAT-----GCT--------GGGTGAC-T--CAAGGC-TGTT-AACAT
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          50433 37 -    147782 T---GGATCAGCAAT-----GCT--------GGGCAAC-T--AAA-CC-TGCT-AACAT
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   114425 46 -    115756 T---GGATAGATAAT-----GCAAGACT-TTAGGCAGT-GA-AACAAC-TGTG-AATAt
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 I 183
s Lemur_catta.scaffold_1                                258407435 35 - 285822530 T---GGTGTAAAAAT-----GCT--------GGGCAAC-T--AGAGGA-TACT-AA---
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        24177 38 +     39228 T---GGTTTAAAAAT-----GCT--------GGGCAAC-T--AGAGGG-TGTC-TATAT
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            53561 38 +     63517 T---GGTTTAAAAAT-----GCT--------GGGCAAC-T--AGAGGG-TGTC-TATAT
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        78825 38 +    116806 T---GGTTTAAAAAT-----GCT--------GGGCAAC-T--AGAGGG-TGTC-TATAT
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     31816 38 -     33031 T---GGTTTAAAAAT-----GCT--------GGGCAAC-T--AGAGGG-TGTC-TATAT
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3086166 38 -   3498232 T---GGATAGGCAAT-----GCT--------GGGTGAC-T--AAGGGC-tgtt-aacat
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    13441 37 +     22452 T---GG-TAAGCCAG-----GCT--------CGGCCAC-T--AAAGAC-TGTT-AACAT
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            136157 38 +   3060487 T---GGATGGGCAAT-----GCT--------GGGTGAC-T--CAACGC-TGTT-AACAT
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19248575 38 +  19376315 T---GGATCCCCAGT-----ACT--------GGGCAAC-T--AAAGCC-TGCT-AACAT
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           10866 38 +     84689 T---GGATAAACAAT-----GTG--------GAACAAC-G--AGACTA-TGTC-AACAT
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3778615 38 +   6799190 T---GGATAAACAAT-----GTG--------GAACAAC-G--AGACTA-TGTC-AACAT
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20594400 38 -  62548349 C---GGACAGGCAGT-----GCT--------GGGTGAC-T--AAAGAC-TGTT-ACCAT
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11088306 38 +  39895028 T---GAATAGGAAAT-----GCT--------GGGTGAC-T--AAGAgc-tatt-aatat
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             20310 38 +     74745 T---GGATCCCCAGT-----ACG--------GGGCAAC-T--AAAGCC-TGCT-AACAT
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12706767 38 +  12821369 T---GGATCCCCAGT-----ACG--------GGGCAAC-T--AAAGCC-TGCT-AACAT
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                2409 38 -      3136 T---GGATCCCCAGT-----ACG--------GGGCAAC-T--AAAGCC-TGCT-AACAT
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           47227 38 +     63263 T---GGATCCCCAGT-----ACG--------GGGCAAC-T--AAAGCC-TGCT-GACAT
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                 1932 38 -      2568 T---GGATCCCCAGT-----ACG--------GGGCAAC-T--AAAGCC-TGCT-AACAT
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 2517 38 -      7381 T---GGATCCCCAGT-----ACG--------GGGCAAC-T--AAAGCC-TGCT-AACAT
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  45734 38 -     79256 T---GGATCCCCAGT-----ATG--------GGGCAAC-T--AAAGCC-TGCT-AACAT
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196035841 38 + 196197964 T---GGATCCCCAGT-----ACG--------GGGCAAC-T--AAAGCC-TGCT-AACAT
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11446011 38 +  11645122 T---GGATCCCCAGT-----ACG--------GGGCAAC-T--AAAGCC-TGCT-AACAT
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   4681 38 -     46448 T---GGATCCCCAGT-----ACG--------GGGCAAC-T--AAAGCC-TGCT-AACAT
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                2355 38 -     13212 T---GGATCCCCAGT-----ACG--------GGGCAAC-T--AAAGCC-TGCT-AACAT
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 16034 38 -     55006 T---GGATCCCCAGT-----ACG--------GGGCAAC-T--AAAGCC-TGCT-AACAT
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43841150 38 +  43892939 T---GGATCCCCAGT-----ACG--------GGGCAAC-T--AAAGCC-TGCT-AACAT
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               17320 38 -     24607 T---GGATCCCCAGT-----ACG--------GGGCAAC-T--AAAGCC-TGCT-AACAT
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               4686 38 -     27140 T---GGATCCCCAGT-----ACG--------GGGCAAC-T--AAAGCC-TGCT-AACAT
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43437735 38 -  43563597 T---GGATCCCCAGT-----ACT--------GGGCAAC-T--AAAGCC-TGCT-AACAT
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4450555 38 -   4543643 T---GGATCCCCAGT-----ACT--------GGGCAAC-T--AAAGCC-TGCT-AACAT
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            146239 38 +    252755 T---GGATAGGCAAT-----GCT--------GGGTGAC-A--AAGGGC-Tgtt-aacat
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             36382 38 +     58827 T---GGATAGGCAAT-----GCT--------GGGTGAC-A--AAGGGC-TGTT-AATAT
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36873859 38 +  64221397 T---GGGTAGGCAAT-----GAT--------GATCAAT-G--AAAGGC-TACT-CACAT
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       64612 22 -    234502 T---GAGTCAGCAAG-----ACA--------CGGTGAC---------------------
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 I 16
s Mellivora_capensis.MelCap_flattened_line_15433             1185 38 -     87323 T---GGATAGGCTAT-----GCT--------GGGTGAC-T--AAGGGC-TGTT-AACAT
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               12912 37 +     15977 T---GGAAAGGCGGC-----ACT--------GGTCAAC-T--AAAA-A-GAAT-GATAT
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1047124 35 -  26018355 T---GGGG--CTGAC-----ACT--------GTTCAAC-T--AAAG-T-GAGT-AATAT
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_227248                    489 38 -      1377 T---GGATAGGCAAT-----GCT--------GGGTGAC-T--CAAGGC-TGTT-AACAT
i Mesoplodon_bidens.MesBid_scaffold_227248              C 0 C 0
s Microcebus_murinus.CM007691.1                          16510451 38 +  47401472 T---GGTTTAAAAAT-----GCT--------GGGCAAC-T--AGAGGA-TGTC-TACAT
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  34643 35 -     48017 T---AAATAGGCTAT-----GCT--------GGATGAC-T--AAATAG-TT----TTAA
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               22874 45 -     32043 T---GGATAGACAAT-----GCTACCCT-TTAGATGAC-T--ACAGGC-TGTT-AATAT
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22820262 37 -  98408828 C---AGAAAAGTGAC-----ACA--------GGTCAAC-T--AAAG-T-GAGT-AATAC
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8209869 45 +  10048721 T---GCAGAGACAAT-----GCTATCCT-TTAGGCGAC-T--AACGGC-TGAG-AATAT
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            34523 45 +     45743 T---GCAGAGACAAT-----GCTATCCT-TTAGGCGAC-T--AACGGC-TGAG-AATAT
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         2284 38 +     29742 T---GGATCCCCAGT-----ACT--------GGGCAAC-T--AAAGCC-TGCT-AACAT
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        11682 38 -    104932 T---GGATAGGCAAT-----GCT--------GGGTGAC-T--AAGGGC-TGTT-AACAT
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     5840 38 +      8497 T---GGTTTAAAAAT-----GCT--------GGGCAAC-T--AGAGGA-TGTC-TACAT
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 146586 38 +    154973 T---GGATGGGCAAT-----GCT--------GGGTGAC-T--CAAGGC-TGTT-AACAT
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                161397 45 +    265003 T---AGATACACAAT-----GCTATCCT-TTAGGTGAC-T--AAAGGC-TGTT-AATAT
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  1676 38 -     19904 T---GGATGGGCAAT-----GCT--------GGGTGAC-T--CAAGGC-TGTT-AACAG
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  145097 41 -    168139 TGGTGGATAGGCAAT-----TCT--------GGGTGAA-T--AAGGGC-TGAT-AACAT
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          19707 45 -    100666 T---GGATAGACAAT-----GCAAGACT-TTAGGCAGC-G--AATGGC-TGTG-AATAT
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70766755 37 +  92629107 T---GGGAAGGTGAC-----ACA--------TGTCAAC-T--CAAA-T-GCAT-GACAT
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75489815 37 +  98207768 T---GGGAAGGTGAC-----ACA--------TGTCAAC-T--CAAA-T-GCAT-GACAT
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67556048 37 +  89017189 C---GGGAAGGTGAC-----ACA--------TGTCAAC-T--CAAA-T-ACAt-gacat
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74330991 37 +  97876770 T---GGGAAGGTGAC-----ACA--------TGTCAAC-T--CAAA-C-GCAT-Gacat
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             12018 37 +     98495 T----GACAAGAGAT-----ACC--------AGTCAAC-T--AGAGCC-TATT-GACAT
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 I 3
s Mustela_putorius.JH417978.1                             4424554 38 -  28371801 T---GGATAGGCTAT-----GCT--------GGGTGAC-T--AAGGGC-tgtt-aacat
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     90196 32 -    117718 T---GGATAGGCAGT-----GAC--------ATTCCAC-T--GAAGGA-TAT-------
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               968018 45 +   8389877 T---GGATAGACAAT-----GCAAGACT-TTAGGCAGC-G--AACGGC-TGTG-AATAT
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5019691 45 +   6462685 T---AGGTAGACAAT-----GCAAGACT-TTAGGCAGC-G--AATGGT-TGTG-AATAT
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3465600 45 -   3747815 T---GGATAGACAAT-----GCAAGACT-TTAGGCAGC-G--AACAGC-TGTG-AATAT
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        10810 45 +     66751 T---GGATAGACAAT-----GCAAGACT-TTAGGCAGC-G--AATGGT-TGTG-AATAT
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             5210 37 -      8794 T---GAATAGGCAAT-----GCT--------GG-CTTC-T--AAAGGC-TGTT-AACAT
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            118863 36 +    362372 T---GGGTGGGCAAC-----GCT--------GGTCAAC-T--GA--GC-TACT-AACGT
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               8790 39 +     48152 T---GGATCCCCAGT-----GCT--------GGGCAACTT--AAAGCC-TGCT-GACAT
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4485073 38 -  14209539 T---GGATAGGCAAT-----GCT--------GGGTGAC-T--AAGGGC-tgtt-aacat
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3951198 38 -   4490290 T---GGATGGGCAAT-----GCT--------GGGTGAC-T--CAAGGC-TGTT-AACAT
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  49912 43 +     94413 T---GGATAGACAAT-----GCT-C-TT-TTAAGTGAC-T--CAAGAC-TGTT-ACTAT
i Noctilio_leporinus.NocLep_scaffold_12062              I 427 C 0
s Nomascus_annamensis.k141_720788                             173 38 -      1065 C---GGATCGCCAAT-----ACT--------GGGCAAC-T--AAAGCC-AGCT-AACAT
i Nomascus_annamensis.k141_720788                       C 0 C 0
s Nomascus_concolor.k141_226614                              1477 38 -      5092 C---CGATCACCAAC-----ACT--------GGGCAAC-T--AAAGCC-AGCT-AACAT
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_1004198                             44 38 +      1448 C---GGATCACCAAA-----ACT--------GGGCAAC-T--AAAGCC-AGCT-AACAT
i Nomascus_gabriellae.k141_1004198                      n 38 I 61
s Nomascus_siki_b.tarseq_80                             25195 38 -  18771707 C---GGATCACCAAC-----ACT--------GGGCAAC-T--AAAGCC-AGCT-AACAT
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  2898 38 +      4512 C---CGATCACCAAC-----ACT--------GGGCAAC-T--AAAGCC-AGCT-AACAT
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                31107 38 +   3668941 T---GAATAGGAAAT-----GCT--------GGGTGAC-T--AAGGgc-tatt-aatat
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65567310 38 -  95554990 T---GGATAAACAAT-----GTG--------GGACAAC-T--AGACTA-TGTC-AACAT
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            4036 38 +      6470 T---GGATAAACAAT-----GTG--------GGACAAC-T--AGACTA-TGTC-AACAT
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65669645 38 +  89412551 T---GGATAAACAAT-----GTG--------GGACAAC-T--AGACTA-TGTC-GACAT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4996189 37 -  23139505 T---GG-TAAGCAAG-----ACT--------GGGCAAC-T--AAAGGC-TGTT-AGCAT
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3685735 32 +  10294119 T---GGATAGGCAGT-----GAC--------GCTCCAC-T--AAAGGC-TAT-------
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             679739 38 -   3126709 T---GGATAGGCAAT-----GCT--------GGGTGAC-T--AAGGGC-tgtt-aacat
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1079882 38 +   1425656 T---GGATGGGCAAT-----GCT--------GGGTAAC-T--CAAGGC-TGTT-AACAT
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         37174 38 +     78940 T---GGATGGGCAAT-----GCT--------GGGTGAC-T--CAAGGC-TGTT-AACAT
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  125516 37 +    145789 C---AGGAAATTGAC-----ACC--------AGTCAAC-T--AAAG-T-GAGC-AATAT
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  37302 37 +     62360 T---GGGGAAGTGAC-----ACA--------GGTCAAC-T--AAAG-T-GGAT-AACAA
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7224883 38 -   7562323 T---GGATGGGCAAT-----GCT--------GGGTGAC-T--CAAGGC-TGTT-AACAT
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              57693 38 -     66828 T---AGGTAAACAAT-----GCT--------AGGTGAC-T--AAAGAC-TGTT-ACCAT
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141876475 37 + 163896628 T---GG-TAAGCCAG-----GCT--------CGGCCAC-T--AAAGAC-TGTT-AACAT
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      308390 38 -    505867 C---GAATAGGAAAT-----GCT--------GGGTGAC-T--AAGGgc-tatt-aatat
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                         935 38 -     53940 T---GGATAAACAAT-----GTG--------GGCCAGC-T--AGACTA-TGTC-AACAC
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18008915 38 -  38779656 T---GGATAAACAAT-----GTG--------GGCCAGC-T--AGACTA-TGTC-Aacac
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134077452 38 - 275406953 T---GGATGGGCAAT-----GCT--------GGGTGAT-T--CAAGGC-TGTT-AACAT
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      78667 38 +    140051 T---AGATGGGCAAT-----GCT--------GGGTGAC-T--CAAGGC-TGTT-AACAT
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127574908 38 - 205426864 C---GGATCACCAAT-----ACT--------GGGCAAC-T--AAAGCC-CGCT-AACAT
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120152062 38 - 196562556 C---GGATCACCAAT-----ACT--------GGGCAAC-T--AAAGCC-CGCT-AACAT
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  34512 41 +    295523 TGGTGGATAGGCAAT-----GCT--------GGGTGAC-T--AAGGAC-TGTT-AACAT
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3638246 41 +  18214204 TGGTGGATAGGCAAT-----GCT--------GGGTGAC-T--AAGGAC-TGTT-AACAT
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5027921 41 -   6340057 TGGTGGATAGGCAAT-----GCT--------GGGTGAC-T--AAGGAC-TGTT-AACAT
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1066302 38 -   1292953 T---GGATGGGCAAT-----GCT--------GGGTGAC-T--CAAGGC-TGTT-AACAT
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188156522 38 - 188283584 T---GGATCCCCAGT-----ACT--------GGGCAAC-T--AAAGCC-TGCT-AACAT
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             4839 38 +      5367 T---GGATCCCCAGT-----ACT--------GGGCAAC-T--AAAGCC-TGCT-AACAT
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47513907 38 +  47705337 T---GGATCCCCAGT-----ACT--------GGGCAAC-T--AAAGCC-TGCT-AACAT
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 67883 38 -    104429 T---GGATCCCCAGT-----ACT--------GGGCAAC-T--AAAGCC-TGCT-AACAT
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    6419 38 +     14967 T---GGATCCCCAGT-----ACT--------GGGCAAC-T--AAAGCC-TGCT-AACAT
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 2278 38 -      7628 T---GGATCCCCAGT-----ACT--------GGGCAAC-T--AAAGCC-TGCT-AACAT
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    115974 41 -    135482 TGGTGGATAGGCAAT-----GCT--------GGGTGAC-T--AAGGGC-TGTT-AGCAT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           5626 38 -     23713 C---AGATAAACAAC-----GTG--------AGACAAC-T--AGACTA-TGTC-AACAT
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            24939 38 -     27972 C---GGATAAACAAC-----GTG--------AGACAAC-T--AGACTA-TGTC-AACAT
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      44772 38 -     45160 T---GGTAAGGGAAT-----GCT--------GGTCATC-T--AAGGGC-TAGT-CACAG
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4950553 37 -   8017169 T---GGGAAAGTGAC-----ACA--------GGTCAAC-T--AAAG-T-GAGT-AACAT
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    12626 37 -     36578 T---GGATAGGAAAT-----TCC--------AGTCAAC-T--ACAGG--TACT-AACAT
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            121488 38 -    122454 T---GGATGGGCAAT-----GCT--------GGGTGAG-T--CAAGGC-TGTT-AACAT
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1987485                           2305 38 -      5908 T---GGATCCCCAGT-----GCT--------GGGCAAC-T--AAAGCC-TGCT-GACAT
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       2929 38 -     17985 T---GGATCCCCAGT-----GCT--------GGGCAAC-T--AAAGCC-TGCT-GACAT
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            2296 38 +      7694 T---GGATCCCCAGT-----GCT--------GGGCAAC-T--AAAGCC-TGCT-GACAT
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26740774 38 +  26888534 T---GGATCCCCAGT-----GCT--------GGGCAAC-T--AAAGCC-TGCT-GACAT
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            97634 46 +    112873 T---AGATAGACAAT-----GCAAGACT-TTAGGCAGT-GA-AATGGC-TATG-AATAT
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             44039 37 -     61926 T---GGATCAGCAAT-----GCT--------GGGCAAC-T--AAA-CT-TGCT-AACAT
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        25424 37 +     78826 T---GGATCAGCAAT-----GCT--------GGGCAAC-T--AAA-CT-TGCT-AACAT
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              9471 37 -     15800 T---GGATCAGCAAT-----GCT--------GGGCAAC-T--AAA-CT-TGCT-AACAT
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        12670 37 -     16101 T---GGATCAGCAAT-----GCT--------GGGCAAC-T--AAA-CT-TGCT-AACAT
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          5898 37 +      9673 T---GGATCAGCAAT-----GCT--------GGGCAAC-T--AAA-CT-TGCT-AACAT
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13474898 37 -  19735023 T---GGATCAGCAAT-----GCT--------GGGCAAC-T--AAA-CT-TGCT-AACAT
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           13801 37 -     31692 T---GGATCAGCAAT-----GCT--------GGGCAAC-T--AAA-CT-TGCT-AACAT
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           5574 38 +     21690 T---GGATGGGCAAT-----ACT--------GAATGAC-T--CAAGGC-TGTT-AACAT
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       23141 37 +     44506 C---GGATCAGCAAT-----GCT--------GGGCAAC-T--AAA-CC-TGCT-AACAT
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        23353 37 +     67491 C---GGATCAGCAAT-----GCT--------GGGCAAC-T--AAA-CC-TGCT-AACAT
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      13593 37 -     98129 C---GGATCAGCAAT-----GCT--------GGGCAAC-T--AAA-CC-TGCT-AACAT
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     23193 37 +    147771 C---GGATCAGCAAT-----GCT--------GGGCAAC-T--AAA-CC-TGCT-AACAT
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        23450 37 -     23762 C---GGATCAGCAAT-----GCT--------GGGCAAC-T--AAA-CC-TGCT-AACAT
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          3912 37 -     55515 C---GGATCAGCAAT-----GCT--------GGGCAAC-T--AAA-CC-TGCT-AACAT
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         23266 37 +    152463 C---GGATCAGCAAT-----GCT--------GGGCAAC-T--AAA-CC-TGCT-AACAT
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                        983 37 -    119457 C---GGATCAGCAAT-----GCT--------GGGCAAC-T--AAA-CC-TGCT-AACAT
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         12989 37 +    134592 C---GGATCAGCAAT-----GCT--------GGGCAAC-T--AAA-CC-TGCT-AACAT
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          23576 37 -     75465 C---GGATCAGCAAT-----GCT--------GGGCAAC-T--AAA-CC-TGCT-AACAT
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              187428 38 -    373494 C---AGATCACCAAT-----ACT--------GGCCAAC-T--GAAGCC-CGCT-AACTT
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19808076 38 +  19899266 C---AGATCACCAAT-----ACT--------GGCCAAC-T--GAAGCC-CGCT-AACTT
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               6035 38 -     15069 T---GGATCCCCAGT-----GCT--------GGGCAAC-T--AAAGCC-TGCT-GACAT
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              6165 38 +     14865 T---GGATCCCCAGT-----GCT--------GGGCAAC-T--AAAGCC-TGCT-GACAT
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                2129 38 -      9567 T---AGACATGCAAC-----GCT--------GAGTGAC-T--AAAGAC-TGTT-AGTAT
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6848814 35 +  12164890 T---GGTGTAAAAAT-----GCT--------GGGCAAC-T--AGAGGA-TACC-AA---
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     17113 38 -     30946 T---GGTTTAAAAAT-----GCT--------GGCCAAC-T--AGAGGA-TGTC-TACAT
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         3875 37 +     11805 T---TGTTTAAAAAT-----GCT--------GGGCAAC-T--AGAG-A-TGTC-TACAT
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           43213 38 +     52369 T---GGTTTAAAAAT-----GTT--------GGGCAAC-T--AGAGGA-TGTC-TACAT
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         35600 38 -     44753 T---GGTTTAAAAAT-----GCT--------GGGCAAC-T--AGAAGA-CGTC-TACAT
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            17524 38 +     27322 T---GGTTTAAAAAT-----GTT--------GGGCAAC-T--AGAGGA-TGTC-TACAT
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       17160 38 -     53241 T---GGTTTAAAAAT-----GCT--------GGACAAC-T--AGAGGA-TGTC-TACAT
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         39424 38 -     48185 T---GGTTTAAAAAT-----GCT--------GGCCAAC-T--AGAGGA-TGTC-TACAT
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           34460 37 +     77221 T---GGAAAGGCGGC-----ACT--------GGTCAAC-T--AAAG-A-GAAT-GATAT
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            4042 45 -     27784 T---GGATAGACACT-----GCTATCCT-TTAGGTGGC-T--AAAGgc-tgtt-aatat
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        246864 38 -    344369 T---GGATAGGCTAT-----GCT--------GGGTGAC-T--AAGGGC-TGTT-AACAT
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13246164 40 -  17261082 T---GAATAGGCAAT-----ACT--------AGCTGAC-TATAAAGGC-TGTT-AACAT
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             604115 40 -   3946241 T---GAATAGGCAAT-----ACT--------AGCTGAC-TATAAAGGC-TGTT-AACAT
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131534499 41 - 161321710 TGGTGGATAGGCAAT-----GCT--------GGGTGAC-T--AAGGAC-TGTT-AACAT
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             30156 38 +     56732 T---GGATCCCCAGT-----GCT--------GGGCAAC-T--AAAGCC-TGCT-GACAT
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6806644 38 +   6970761 T---GGATCCCCAGT-----GCT--------GGGCAAC-T--AAAGCC-TGCT-GACAT
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             6035 38 +     18040 T---GGATCCCCAGT-----GCT--------GGGCAAC-T--AAAGCC-TGCT-GACAT
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                15961 38 +     68503 T---GGATGGGCAAT-----GCT--------GGGTGAC-T--CAAGGC-TGTT-AACAT
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13915757 37 +  90463843 T---AGGAAGATGAC-----ACA--------GGTTAGC-T--CAAA-T-GGAT-gacat
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1787992 39 +   2252614 T---GAATAGGCAAT-----GCT--------TGGTGAC-T-GAAAGGC-TGTG-GACAT
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                             447 38 -     17045 T---GGATCCCCAGT-----GCT--------GGGCAAC-T--AAAGCC-TGCT-GACAT
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206377924 38 - 206558726 T---GGATCCCCAGT-----GCT--------GGGCAAC-T--AAAGCC-TGCT-GACAT
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44856838 38 -  45163003 T---GGATCCCCAGT-----GCT--------GGGCAAC-T--AAAGCC-TGCT-GACAT
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                19504 40 +    109198 T---GAATAGGCGAT-----GCT--------AGCTGAC-TATAAAGGC-TGTT-AACAT
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 I 1
s Saiga_tatarica.SaiTat_scaffold_82192                       8128 38 +     12214 T---GGATGGGCAAT-----GCT--------GGGTAAC-T--CAAGGC-TGTT-AATAT
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15673003 37 -  43202129 T---GGATCAGCAAT-----GCT--------GGGCAAC-T--CAA-CC-TGCT-AACAT
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        4916 37 +     34089 T---GGATCAGCAAT-----GCT--------GGGCAAC-T--CAA-CC-TGCT-AACAT
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              4858 37 -     60842 T---GGATCAGCAAT-----GCT--------GGGCAAC-T--CAA-CC-TGCT-AACAT
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              4951 37 +     67014 T---GGATCAGCAAT-----GCT--------GGGCAAC-T--CAA-CC-TGCT-AACAT
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              4929 37 +     60816 T---GGATCAGCAAT-----GCT--------GGGCAAC-T--CAA-CC-TGCT-AACAT
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 4866 37 -     76454 T---GGATCAGCAAT-----GCT--------GGGCAAC-T--CAA-CC-TGCT-AACAT
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17341591 37 -  30362882 T---GGATCAGCAAT-----GCT--------GGGCAAC-T--AAA-CC-TGCT-AACAT
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         20952 37 -     62485 T---GGATCAGCAAT-----GCT--------GGGCAAC-T--AAA-CC-TGCT-AACAT
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   32470 37 -    114521 C---AGACAGGCAAT-----GTT--------G-GTGAC-T--GGAAGC-TGTT-AGCAT
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        3648 38 +     15331 T---GGATCCCCAGT-----GCT--------GGGCAAC-T--AAAGCC-TGCT-GACAT
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       9041 38 +     20762 T---GGATCCCCAGT-----GCT--------GGGCAAC-T--AAAGCC-TGCT-GACAT
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         119044 38 +    130994 T---GGATCCCCAGT-----GCT--------GGGCAAC-T--AAAGCC-TGCT-GACAT
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           37830 38 +     46263 T---GGATCCCCAGT-----GCT--------GGGCAAC-T--AAAGCC-TGCT-GACAT
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     30950 38 +     42640 T---GGATCCCCAGT-----GCT--------GGGCAAC-T--AAAGCC-TGCT-GACAT
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        13990 38 +     30600 T---GGATCCCCAGT-----GCT--------GGGCAAC-T--AAAGCC-TGCT-GACAT
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  100497 37 -    120886 C---AGGGATGTCAC-----CCT--------GGTAAAC-T--AGTG-T-GAGA-AATAT
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            19051 38 +    739146 T---GGAGAAGCAGT-----GCT--------GAGTGAC-T--AAAAGC-TGTT-AACAT
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17765550 23 -  27805282 -------------------------------AAGTGCC-T--AATGGC-TGTT-ACCAT
i Sorex_araneus.JH798170.1                              I 11431 C 0
s Spermophilus_dauricus.KZ294190.1                        2239951 38 +   2842873 T---GGGTAGGCAAT-----GAT--------GATCAAT-G--AAAGGC-TACT-CACAT
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             234984 38 -    276980 T---GGATAGGCAAT-----GCT--------GGGTGAC-T--AAGGGC-TGTT-AGCAT
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            27757 41 +     62062 TGGTGGATAGGCAAT-----GCT--------GGGAGAA-T--AAGGGC-TGAT-AACAT
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189272040 38 + 218635234 G---GGATGGGCAAC-----ACT--------GAATGAC-T--AAAGGC-TGTT-AACAT
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        15180 38 -  13920577 C---GGATCACCAAC-----ACT--------GGGCAAC-T--AAAGCC-AGCT-AACAT
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                 423 43 +     20549 T---GGG--GACAAC-----GCCATCCT-GTAGGTGAC-T--AAAGGC-TGTG-AATAT
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               14873 37 +     45698 T---GAATAGGCAAT-----GCT--------GG-CTTC-T--AAAGGC-TGTT-AACAT
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      807293 38 +   1148477 T---AGACAGGCAAT-----GGT--------GGGTGAC-T--AAGGGC-TGTT-AACAT
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  58004 38 +     99546 T---AGATAGGCAAT-----GGT--------GGGTGAC-T--AAGGGC-TGTT-AACAT
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               26721 38 +     42269 T---GGAGAAGCAAT-----GCA--------GAGCAAT-T--AAAGGC-AGTT-CACAT
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               60037 38 +     65473 T---GGAGAAGCAAT-----GCA--------GAGCAAT-T--AAAGGC-AGTT-CACAT
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194008044 38 - 194193292 T---GGATCCCCAGT-----ACT--------GGGCAAC-T--AAAGCC-TGCT-AACAT
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  5692 38 +      6782 T---GGATAGGCAAT-----GCT--------GGGCTAC-T--AAAGGC-TGTT-AACAT
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  136034 45 -    259118 A---GGATAGACAAC-----GCTACCCT-TTAGGTGAC-T--AAAGGC-TGTT-AATAT
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        27146 38 +     38948 T---GGATCCCCAGT-----GCT--------GGGCAAC-T--AAAGCC-TGCT-GACAT
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   20878 38 -     32910 T---GGATCCCCAGT-----GCT--------GGGCAAC-T--AAAGCC-TGCT-GACAT
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      2264 38 -     12939 T---GGATCCCCAGT-----GCT--------GGGCAAC-T--AAAGCC-TGCT-GACAT
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       2200 38 -     14244 T---GGATCCCCAGT-----GCT--------GGGCAAC-T--AAAGCC-TGCT-GACAT
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           43599 38 -     54611 T---GGATCCCCAGT-----GCT--------GGGCAAC-T--AAAGCC-TGCT-GACAT
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        1402 38 -     11566 T---GGATCCCCAGT-----GCT--------GGGCAAC-T--AAAGCC-TGCT-GACAT
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     3579 38 -     15592 T---GGATCCCCAGT-----GCT--------GGGCAAC-T--AAAGCC-TGCT-GACAT
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          2235 38 +     14371 T---GGATCCCCAGT-----GCT--------GGGCAAC-T--AAAGCC-TGCT-GACAT
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                    516 38 +     12481 T---GGATCCCCAGT-----GCT--------GGGCAAC-T--AAAGCC-TGCT-GACAT
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                         392 38 -     24393 T---GGATCCCCAGT-----GCT--------GGGCAAC-T--AAAGCC-TGCT-GACAT
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       5638 38 -     28054 T---GGATCCCCAGT-----GCT--------GGGCAAC-T--AAAGCC-TGCT-GACAT
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44660438 38 -  44834318 T---GGATCCCCAGT-----GCT--------GGGCAAC-T--AAAGCC-TGCT-GACAT
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       2746 38 +     13828 T---GGATCCCCAGT-----GCT--------GGGCAAC-T--AAAGCC-TGCT-GACAT
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   5355 38 +     90398 T---GTACGGGCAAG-----GCT--------GGGTGTC-T--CAAGGC-TGTT-AACAT
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16085073 38 +  31416278 T---GGACAGGCAAT-----GCT--------GGGTGAC-T--AAAGAC-TGTT-ACCAC
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2793091 38 -   3938065 T---GGGTGAGCAGT-----GTC--------GGGTTGC-T--GAAGGC-TGTT-AGCAT
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    5291 38 +     13056 T---GGTTGAGCAAT-----GTC--------AGGTTAC-T--AAAGGC-TGTT-AGCAT
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69313599 38 -  96451834 T---GGATGGGCAAT-----GCT--------GGGTGAC-T--CAAGGC-TGTT-AACAT
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   1502 37 +     10241 C---CAATAGGCAAT-----GCT--------C-GTGAC-T--AAAGGC-TGTT-AGCAT
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6514993 38 +  28682327 T---GGATAGGCAAT-----GCT--------GGGTGAC-T--TAGGGC-Tgtt-aacat
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  5514 35 -     20643 T---GGTTTAAAAAT-----GCT--------GGGCAAC-T--AGAGGA-TGCC-AA---
i Varecia_rubra.k141_432109                             C 0 I 3
s Varecia_variegata.k141_775891                             25055 35 -     33872 T---GGTTTAAAAAT-----GCT--------GGGCAAC-T--AGAGGA-TGCC-AA---
i Varecia_variegata.k141_775891                         C 0 I 3
s Vicugna_pacos.KN269600.1                                1524845 38 -   2331223 T---GGATGGACAAT-----GCT--------AGGTGAG-T--AAAGGC-TGTT-AACAT
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                138487 38 -    281493 T---GAATAGGAAAT-----GCT--------GGGTGAC-T--AAGGGC-TATT-AATAT
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       127066 37 -    134049 T---AGGTAGGCAAT-----GCT--------GATCA-C-G--AAAGAC-TATT-CACAT
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        214466 38 -    227762 T---GGATAGGCAAT-----GCT--------GGGTGAC-T--AAGGGC-TGTT-AACAT
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     15173 36 -     20485 G---G-GTAGGGAAC-----TCT--------GGTCAGC-C--ACAG-C-TGGT-CGCAT
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           7098 38 -      8775 T---GGATGGGCAAT-----GCT--------GGGTGAC-T--CAAGGC-TGTT-AACAT
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                701732 90 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             38964  0 -     47444 C
e Elephantulus_edwardii.JH947210.1                        7816071 13 +  15467074 I
e Crocidura_indochinensis.CroInd_scaffold_848148              199  0 +      1327 C
e Hylobates_klossii.k141_285563                               343 193 +      1026 I
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               12063 16 +    209709 A---------------ATTCA--A----A--GG-------A----------CG--GA-G
s Acinonyx_jubatus.LLWD01000356.1                         2034201 16 +   3721120 A---------------ATTAA--A----A--AG-------A----------TG--GG-G
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    112817 16 -    189883 A---------------ACTAA--A----A--TC-------A----------CA--GG-G
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10657539 16 +  23371972 A---------------GTTAA--A----A--AG-------A----------TG--GG-G
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7094886 16 -  16596857 a---------------attaa--a----a--ag-------a----------tG--GG-G
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   17101 16 -     22067 A---------------ATTAA--A----G--TC-------A----------CA--AG-G
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   1573 16 -     60446 A---------------ATTCA--A----A--GG-------A----------TG--GA-G
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         2293 16 -     29318 A---------------ATTCA--A----A--GG-------A----------TG--GA-G
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         1228 16 +     38766 A---------------ATTCC--A----A--GG-------A----------TG--GA-G
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          2187 16 -     80423 A---------------ATTCA--A----A--GG-------A----------TG--GA-G
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            10490 16 -     18050 A---------------ATTAA--A----A--GG-------A----------TG--TA-G
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_1710068                                203 16 +      1555 A---------------ATTAA--A----A--GG-------A----------TG--GA-G
i Alouatta_caraya.k141_1710068                          C 0 C 0
s Alouatta_discolor.k141_811576                             11163 16 -     21359 A---------------ATTAA--A----A--GG-------A----------TG--TA-G
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                 782 16 +      2129 A---------------ATTAA--A----A--GG-------A----------TG--GA-G
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_2177643                           166 16 -      1868 A---------------ATTAA--A----A--GG-------A----------TG--GA-G
i Alouatta_macconnelli.k141_2177643                     C 0 C 0
s Alouatta_nigerrima.k141_3537692                             215 16 +      1660 A---------------ATTAA--A----A--GG-------A----------TG--GA-G
i Alouatta_nigerrima.k141_3537692                       C 0 C 0
s Alouatta_palliata.k141_2764429                              132 16 -      1480 A---------------ATTAA--A----A--GG-------A----------TG--TA-G
i Alouatta_palliata.k141_2764429                        I 125 C 0
s Alouatta_puruensis.k141_1284840                            4208 16 -      4927 A---------------ATTAA--A----A--GG-------A----------TG--GA-G
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_1531728                             347 16 -      1692 A---------------ATTAA--A----A--GG-------A----------TG--TA-G
i Alouatta_seniculus.k141_1531728                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3520339 16 +   4113121 A---------------ATTAA--A----A--GG-------A----------TG--GA-A
i Ammotragus_lervia.NIVO01013474.1                      C 0 I 1
s Anoura_caudifer.AnoCau_scaffold_422                      390538 13 -    631301 A---------------ATTAT--A----A--GG-------A----------TA------
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 I 1
s Antilocapra_americana.AntAmePen_scaffold_42841            30920 16 +     33004 A---------------ATAAA--A----A--GG-------A----------TG--GA-A
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 I 1
s Aotus_azarae.k141_3170768                                 62842 16 +     78111 A---------------ATTAA--A----A--GG-------A----------TG--GA-G
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            5784 16 +     22701 A---------------ATTAA--A----A--GG-------A----------TG--GA-G
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5749741 16 +   9889416 A---------------ATTAA--A----A--GG-------A----------TG--GA-G
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             6330 16 -    104377 A---------------ATTAA--A----A--GG-------A----------TG--GA-G
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               6332 16 +     23246 A---------------ATTAA--A----A--GG-------A----------TG--GA-G
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     3903  8 +      5067 A---------------ATAAA--A----T------------------------------
i Aplodontia_rufa.AprRuf_scaffold_156013                I 2 I 3
s Arctocebus_calabarensis.k141_587554                        1261 13 +      9265 A---------------AGTAA--A----A--GG-------A----------TG------
i Arctocebus_calabarensis.k141_587554                   C 0 I 3
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 8943 13 -     29036 A---------------ATTAT--A----A--GG-------A----------TG------
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 I 1
s Ateles_geoffroyi_b.tarseq_2582                             9539601 16 +  39197703 A---------------ATTAA--A----A--GG-------A----------TG--GA-G
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             60872 16 +     85812 A---------------ATTAA--A----A--GG-------A----------TG--GA-G
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                11885 16 +     89302 A---------------ATTAA--A----A--GG-------A----------TG--GA-G
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             16388 16 -     58268 A---------------ATTAA--A----A--GG-------A----------TG--GA-G
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             64380 16 +    119057 A---------------ATTAA--A----A--GG-------A----------TG--GA-G
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               6351 16 -     25888 A---------------ATTAA--A----A--GG-------A----------TG--GA-G
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 6996 15 -     16375 A---------------ATTAA--A----A--GG-TAG-G-G------------------
i Avahi_laniger.k141_2840928                            C 0 I 1
s Avahi_peyrierasi.k141_798820                                615 15 +      6337 A---------------ATTAA--A----A--GG-TGG-G-G------------------
i Avahi_peyrierasi.k141_798820                          C 0 I 1
s Balaenoptera_acutorostrata.KI537095.1                  26380413  7 +  51448160 a---------------attaa--a-----------------------------------
i Balaenoptera_acutorostrata.KI537095.1                 C 0 I 6
s Balaenoptera_bonaerensis.DF502048.1                        5582 16 -     13118 A---------------ATTAA--A----A--GA-------A----------TG--GG-G
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   43409 16 -     72089 A---------------ATTAA--A----A--GG-------A----------TG--GA-A
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 I 1
s Bison_bison.KN264915.1                                  6560072 16 +   6870073 a---------------attaa--a----a--gg-------a----------tg--ga-a
i Bison_bison.KN264915.1                                C 0 I 1
s Bos_indicus.CM003021.1                                138140181 16 - 161108492 a---------------attaa--a----a--gg-------a----------tg--ga-a
i Bos_indicus.CM003021.1                                C 0 I 1
s Bos_mutus.JH883513.1                                     572722 16 -    998990 a---------------attaa--a----a--gg-------a----------tg--ga-a
i Bos_mutus.JH883513.1                                  C 0 I 1
s Bos_taurus.CM000177.6                                 136295914 16 - 158972876 a---------------attaa--a----a--gg-------a----------tg--ga-a
i Bos_taurus.CM000177.6                                 C 0 I 1
s Bubalus_bubalis.KI419065.1                              1232993 16 -   1914593 a---------------attaa--a----a--gg-------a----------tg--ga-a
i Bubalus_bubalis.KI419065.1                            C 0 I 1
s Cacajao_ayresi.k141_724503                               114238 16 -    171031 A---------------ATTAA--A----A--GG-------A----------TG--GA-G
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 13267 16 +    125063 A---------------ATTAA--A----A--GG-------A----------TG--GA-G
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                15310 16 -    216513 A---------------ATTAA--A----A--GG-------A----------TG--GA-G
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        7853 16 -    134917 A---------------ATTAA--A----A--GG-------A----------TG--GA-G
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3219778 16 -   8989139 A---------------ATTAA--A----A--GG-------A----------TG--GG-G
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           397479 16 -  15254737 A---------------ATTAA--A----A--GG-------A----------TG--GG-G
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2973215 16 +   6889770 A---------------ATTAA--A----A--GG-------A----------TG--GG-G
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11519687 16 +  39901454 A---------------ATTTT--T----T--AA-------A----------TG--GG-G
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   14712 16 +     87036 A---------------ATTTT--T----T--AA-------A----------TG--GG-G
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11266354 16 -  35597290 a---------------atttt--t----t--aa-------a----------tg--gg-g
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11088888 16 +  39895921 a---------------atttt--t----t--aa-------a----------tg--gg-g
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16455903 16 -  44759192 a---------------atttt--t----t--aa-------a----------tg--gg-g
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21325415 16 + 157394656 A---------------ATTAA--A----A--GG-------A----------TG--GA-A
i Capra_aegagrus.CM003214.1                             C 0 I 1
s Capra_hircus.CM004562.1                               135706643 16 - 157403528 A---------------ATTAA--A----A--GG-------A----------TG--GA-A
i Capra_hircus.CM004562.1                               C 0 I 1
s Carlito_syrichta.NW_007248099.1                          309285 14 +    345090 A---------------ATTAA--A----A--G--------A----------TG--G--G
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               59734 13 +     67245 A---------------ATTAT--A----A--GG-------A----------TG------
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 I 1
s Castor_canadensis.CasCan_scaffold_47037                   30940 17 +     33760 A---------------CATAA--A----A--TA------AC----------TA--GG-A
i Castor_canadensis.CasCan_scaffold_47037               C 0 I 398
s Catagonus_wagneri.CatWag_scaffold_1305                   159100 16 -    276539 A---------------ATTAA--A----A--GG-------A----------TG--GG-G
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15786811 16 -  24422027 A---------------ATTAA--A----G--TG-------A----------CA--GG-G
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15798747 16 -  24440124 A---------------ATTAA--A----G--TG-------A----------TA--GG-G
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       176938 16 +    436027 A---------------ATTAA--A----G--TG-------A----------TA--GG-G
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18891084 16 -  29618158 A---------------ATTAA--A----A--GG-------A----------TG--GA-G
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 8628 16 -     26817 A---------------ATTAA--A----A--GG-------A----------TG--GA-G
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                12871 16 +     25043 A---------------ATTAA--A----A--GG-------A----------TG--GA-G
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         8313 14 +     21754 A---------------ATTAA--A----A--G--------A----------TG--G--G
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4364092 16 +   7569818 a---------------attaa--a----a--ga-------a----------TG--GA-G
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         3849 16 -      9338 A---------------ATTAA--A----A--GA-------A----------TG--GA-G
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6555519 16 +   6739814 A---------------ATTCA--A----A--GG-------A----------TG--GA-G
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      26996 16 +     60454 A---------------ATTCA--A----A--GG-------A----------TG--GA-G
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          2202 16 -     21101 A---------------ATTCA--A----A--GG-------A----------TG--GA-G
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         59511 16 -    107033 A---------------ATTCA--A----A--GG-------A----------TG--GA-G
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        2401 16 -     17608 A---------------ATTCA--A----A--GG-------A----------TG--GA-G
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          29897 16 +     30494 A---------------ATTCA--A----A--GG-------A----------TG--GA-G
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          58742 16 -     59240 A---------------ATTCA--A----A--GG-------A----------TG--GA-G
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          2443 16 +     16677 A---------------ATTCA--A----A--GG-------A----------TG--GA-A
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           24602 16 +     35983 A---------------ATTCA--A----A--AG-------A----------TG--GA-G
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11991128 16 +  12117833 A---------------ATTCA--A----A--GG-------A----------TG--GA-G
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46477888 16 +  46592721 A---------------ATTCA--A----A--AG-------A----------TG--GA-G
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      41439 16 -     45581 A---------------ATTCA--A----A--GG-------A----------TG--GA-G
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       2444 16 +     35577 A---------------ATTCA--A----A--GG-------A----------TG--GA-G
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        2220 16 -     25661 A---------------ATTCA--A----A--GG-------A----------TG--GA-G
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        2199 16 -     17744 A---------------ATTCA--A----A--AG-------A----------TG--GA-G
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        21814 16 +     37128 A---------------ATTCA--A----A--GG-------A----------TG--GA-G
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           2972 16 -      6963 A---------------ATTAA--A----A--GA-------A----------TG--GG-A
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           59279  7 -     68416 A---------------ATTAA--A-----------------------------------
i Cheirogaleus_major.k141_1157592                       C 0 I 9
s Cheirogaleus_medius.k141_133808                            8324  7 +     13308 A---------------ATTAA--A-----------------------------------
i Cheirogaleus_medius.k141_133808                       C 0 I 9
s Cheracebus_lucifer.k141_619653                             5895 16 -     18223 A---------------ATTAA--A----A--GG-------A----------TG--GA-G
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             22915 16 +     25473 A---------------ATTAA--A----A--GG-------A----------TG--GA-G
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           41953 16 +     57117 A---------------ATTAA--A----A--GG-------A----------TG--GA-G
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          46632 16 +     54541 A---------------ATTAA--A----A--GG-------A----------TG--GA-G
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15961954 16 +  43084221 C---------------ACTAA--A----A--AG-------A----------TA--GA-C
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         71439 16 +    196370 A---------------ATTAA--A----A--GG-------A----------TG--GA-G
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          15619 16 +     40510 A---------------ATTAA--A----A--GG-------A----------TG--GA-G
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15139334 16 -  15256731 A---------------ATTCC--A----A--GG-------A----------TG--GA-G
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      34415 16 -     53260 A---------------ATTCC--A----A--GG-------A----------TG--GA-G
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101144975 16 + 101219884 A---------------TTTCC--A----A--GG-------A----------TG--GA-G
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                16678 15 -     21363 A---------------ACTAA--A----A--G--------A----------TG--GG-A
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           761981 15 +    964067 A---------------ACTAA--A----A--G--------A----------TG--GG-A
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10886744 16 +  10971483 G---------------ATTCA--A----A--GG-------A----------TG--GA-G
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147664909 16 + 156195979 G---------------ATTCA--A----A--GG-------A----------TG--GA-G
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            16894 16 +     23629 G---------------ATTCA--A----A--GG-------A----------TG--GA-G
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60613806 16 +  78930452 A---------------ATTAA--A----A--GG-------G----------TG--GG-G
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         39918 13 -     40477 a---------------attat--a----a--gc-------a----------gg------
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     I 16 I 1
s Cricetomys_gambianus.CriGam_scaffold_949                 278789 16 -    399297 A---------------ATTAA--A----A--TC-------A----------GA--GG-G
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53029451 15 +  72327488 a---------------aataa--a----a--tt-------a----------ca---g-g
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            52237 16 -     70449 A---------------ATTAA--A----G--GG-------A----------TG--GG-G
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  208421 31 -    956709 TAAATAAGCCAATATTACTCA--A----A--TT-------A----------TA--TG-G
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                17989 16 +     26546 A---------------ATTAA--A----A--TG-------A----------TG--GG-G
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             59078 16 -    236241 A---------------ATTAA--A----A--TG-------A----------TA--GG-G
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          183857 16 -   6883506 A---------------GTTAA--A----A--GG-------A----------TG--GG-A
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16845131 16 +  31942871 A---------------ATTAA--A----A--GG-------A----------TG--GG-A
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80037034 16 -  96802777 A---------------ATTAA--A----A--GA-------A----------TG--GG-G
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18699013 10 -  18957592 A---------------A---T--A----A--GG-------A----------TG------
i Desmodus_rotundus.KZ672188.1                          C 0 I 1
s Dicerorhinus_sumatrensis.PEKH010003161.1                 322741 16 +    993696 a---------------attaa--a----a--ga-------a----------TG--GA-G
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   3395 16 +    151128 A---------------ATTAA--A----A--GA-------A----------TG--GA-G
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   157218 16 +    228994 C---------------ATTAA--A----A--AG-------A----------TA--GG-A
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3656537  9 +   4240102 A---------------GTGAA--A----A--T---------------------------
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 28170 16 +     28912 A---------------GTGAA--A----A--TG-------C----------TA--AG-G
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                36307 16 -     73477 A---------------ATTAA--A----A--TG-------A----------TA--TG-G
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22998672 25 -  44670279 A---------------AGTAA--A----G--AG-------ATTGGGGGGG-GA--GC-A
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 12473 13 +     24177 A---------------ATTAT--G----A--GA-------A----------TG------
i Eidolon_helvum.KE772537.1                             C 0 I 1
s Elaphurus_davidianus.JRFZ01086400.1                     1491689 16 +   1727528 A---------------ATTAA--A----A--GT-------A----------TG--GA-A
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 I 1
s Ellobius_lutescens.LOEQ01003611.1                        240001 18 -    369425 A---------------ATTCA--A----ATTTC-------A----------CA--AG-G
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           7108 18 -      7838 A---------------ATTCA--A----AATTC-------A----------CA--AG-G
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85872411 16 +  99434291 a---------------attaa--a----a--ag-------a----------tG--GG-G
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4704382 13 +   6522550 A---------------ATTAT--G----A--CA-------A----------TG------
i Eptesicus_fuscus.JH977687.1                           C 0 I 1
s Equus_asinus.JREZ01000062.1                             5853191 16 -   7175178 A---------------ATTAA--A----A--GA-------A----------TG--GA-G
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13351696 16 +  41866177 A---------------ATTAA--A----A--GA-------A----------TG--GA-G
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          13185 16 +     92910 A---------------ATTAA--A----A--GA-------A----------TG--GA-G
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11534471 16 +  16010500 A---------------ATTAA--A----A--GA-------A----------TG--AG-G
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48774102 16 -  48907691 A---------------ATTCA--A----A--GG-------A----------TG--GA-G
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          315252 16 +    330699 A---------------ATTAA--A----A--GA-------A----------TG--GG-G
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             61703 16 +     89355 A---------------ATTAA--A----A--GA-------A----------TG--GG-G
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              5331 16 +     13586 ----------------------------A--AGGTG-AG-G----------GGGTGG-G
i Eulemur_albifrons.k141_715837                         I 11 C 0
s Eulemur_collaris.k141_311830                               5262 16 -      6809 ----------------------------A--AGGTG-AG-G----------GGGTGG-G
i Eulemur_collaris.k141_311830                          I 11 C 0
s Eulemur_coronatus.k141_3240342                            11739 16 +     36558 ----------------------------A--AGGTG-AG-G----------GGGTGG-G
i Eulemur_coronatus.k141_3240342                        I 11 C 0
s Eulemur_flavifrons.k141_903901                             8060 16 +     60246 ----------------------------A--AGGTG-AG-G----------GGGTGG-G
i Eulemur_flavifrons.k141_903901                        I 11 C 0
s Eulemur_fulvus.k141_653297                                11536 16 +    109717 ----------------------------A--AGGTG-AG-G----------GGGTGG-G
i Eulemur_fulvus.k141_653297                            I 11 C 0
s Eulemur_macaco.k141_1341545                               15922 16 +     16540 ----------------------------A--AGGTG-AG-G----------GGGTGG-G
i Eulemur_macaco.k141_1341545                           I 11 C 0
s Eulemur_mongoz.k141_825972                                16197 16 +     27497 ----------------------------A--AGGTG-AG-G----------GGCTGG-G
i Eulemur_mongoz.k141_825972                            I 11 C 0
s Eulemur_rubriventer.k141_411740                           18654 16 +     26808 ----------------------------A--AGGTG-AG-G----------GGGTGG-G
i Eulemur_rubriventer.k141_411740                       I 11 C 0
s Eulemur_rufus.k141_1620292                                33392 16 +     46535 ----------------------------A--AGGTG-AG-G----------GGGTGG-G
i Eulemur_rufus.k141_1620292                            I 11 C 0
s Eulemur_sanfordi.k141_186399                              16116 16 -     29447 ----------------------------A--AGGTG-AG-G----------GGGTGG-G
i Eulemur_sanfordi.k141_186399                          I 11 C 0
s Felis_catus.CM001386.2                                129893160 16 - 159252932 A---------------ATTAA--A----A--GG-------A----------TG--GG-G
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129280252 16 - 158578461 A---------------ATTAA--A----A--GG-------A----------TG--GG-G
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 21392 16 +     52776 A---------------ATTAA--A----A--GG-------A----------TG--GG-G
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Galago_moholi.ctg555                                     211155 16 -    847004 A---------------AGGGA--A----A--GG-------A----------AA--GG-G
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           13529 16 -     43889 A---------------AGGGA--A----A--GG-------A----------AA--GG-G
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          10603 16 +     27357 A---------------AGGAA--A----A--GG-------A----------AA--GG-G
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               156509 16 +    324696 A---------------ATTAA--A----A--GG-------A----------AG--GG-G
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    181483 16 -    189561 a---------------attaa--a----a--gg-------a----------tg--ga-a
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 I 1
s Glis_glis.GliGli_scaffold_79770                           13292 10 -     18683 A---------------ATTAA--AA--CA------------------------------
i Glis_glis.GliGli_scaffold_79770                       C 0 I 6
s Gorilla_beringei.k141_111300                               5580 16 -     14630 A---------------ATTCA--A----A--GG-------A----------TG--GA-G
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119652680 16 - 195582420 A---------------ATTCA--A----A--GG-------A----------TG--GA-G
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   77821 10 +    118900 A---------------ATTAA--A-GA-A------------------------------
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 I 6
s Hapalemur_alaotrensis.k141_1280836                         2108 15 +     10286 ----------------------------A--GGGTGG-G-G----------GG--GGAG
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                              585 15 -     11661 ----------------------------A--GGGTGG-G-G----------GG--GGAG
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             5914 15 +     56096 ----------------------------A--GGGTGG-G-G----------GG--GGAG
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        29164 16 -     42470 ----------------------------A--GGGTGG-GGG----------GG--GGAG
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        45786 17 -     54384 ----------------------------A--GGGTGGCGGG----------GG--GGAG
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              17443 16 +     53719 A---------------ATGAA--A----G--GA-------A----------CG--GG-A
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                27699 16 -     91191 A---------------ATTAA--A----A--GG-------A----------TG--GA-A
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 I 1
s Heterocephalus_glaber.JH602058.1                        2551311 16 +  31725842 a---------------attaa--a----a--tg-------a----------ta--GG-A
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               61057 16 +     73687 A---------------ATTAA--A----A--CG-------A----------AG--AT-A
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              147338 16 +    277961 A---------------ATTAA--A----A--GG-------A----------AG--GG-G
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      278607 13 -    477199 A---------------ATTAT--A----A--GG-------A----------TG------
i Hipposideros_armiger.JXIK01001085.1                   C 0 I 1
s Hipposideros_galeritus.HipGal_scaffold_104691              7753 13 -      9143 A---------------ATTAT--A----A--GG-------A----------TG------
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 I 1
s Hoolock_leuconedys.ctg79                                      4986 16 -   7690867 A---------------ATTCA--A----A--GG-------A----------TG--GA-G
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 17512 16 -     67322 A---------------ATGAA--A----A--GG-------A----------TG--GG-G
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19222 16 -    119109 A---------------ATTAA--A----A--TG-------G----------CA--GA-G
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_164775                              2042 16 +      2073 A---------------ATTCA--A----A--GG-------A----------TG--GA-G
i Hylobates_abbotti.k141_164775                         C 0 C 0
s Hylobates_agilis.k141_1878600                               304 16 -      1230 A---------------ATTCA--A----A--GG-------A----------TG--GA-G
i Hylobates_agilis.k141_1878600                         I 38 C 0
s Hylobates_pileatus_b.ContigUN                                 14624957 16 -  25970782 A---------------ATTCA--A----A--GG-------A----------TG--GA-G
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            2213 16 -      2977 A---------------ATTCA--A----A--GG-------A----------TG--GA-G
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             34116 16 -     60944 A---------------ATTCA--A----A--GG-------A----------TG--GA-G
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     6377 16 +     22540 A---------------ATTAA--A----A--TG-------A----------TA--AG-G
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7126073  8 +  13083262 A---------------ATGAA--A----T------------------------------
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 I 6
s Indri_indri.k141_5141390                                    629 16 -      3181 A---------------ATTAA--A----A--GGG------G----------GG---G-A
i Indri_indri.k141_5141390                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               9239 16 +     17520 A---------------ATTAA--A----A--GA-------A----------TG--GG-G
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8566113 16 +  11848649 A---------------ATTAA--A----G--TC-------A----------CA--GG-G
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               23851 16 +     37189 A---------------ATTAA--A----A--GA-------A----------TG--GG-G
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          50470 16 -    147782 A---------------ATTAA--A----A--GG-------A----------TG--GA-G
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   114654 13 -    115756 A---------------ATTAT--A----A--CA-------A----------TG------
i Lasiurus_borealis.LasBor_scaffold_5102                I 183 I 1
s Lemur_catta.scaffold_1                                258407470 14 - 285822530 ----------------------------A--GGGTGG-G-G----------GG--GT-G
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        24215  7 +     39228 A---------------ATTAA--A-----------------------------------
i Lepilemur_ankaranensis.k141_884009                    C 0 I 9
s Lepilemur_dorsalis.k141_134267                            53599  7 +     63517 A---------------ATTAA--A-----------------------------------
i Lepilemur_dorsalis.k141_134267                        C 0 I 9
s Lepilemur_ruficaudatus.k141_617879                        78863  7 +    116806 A---------------ATTAA--A-----------------------------------
i Lepilemur_ruficaudatus.k141_617879                    C 0 I 9
s Lepilemur_septentrionalis.k141_578524                     31854  7 -     33031 A---------------ATTAA--A-----------------------------------
i Lepilemur_septentrionalis.k141_578524                 C 0 I 9
s Leptonychotes_weddellii.KB714749.1                      3086204 16 -   3498232 a---------------attaa--a----a--ag-------a----------tG--GG-G
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    13478 16 +     22452 A---------------ATTAA--A----A--GG-------A----------TG--GG-A
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            136195 16 +   3060487 A---------------ATTAA--A----A--GA-------A----------TG--GG-G
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19248613 16 +  19376315 A---------------ATTCA--A----A--GG-------A----------TG--GA-G
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           10904 16 +     84689 A---------------AGTAA--A----A--GG-------A----------TG--GG-G
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3778653 16 +   6799190 A---------------AGTAA--A----A--GG-------A----------TG--GG-G
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20594438 16 -  62548349 A---------------ATCAA--A----A--GG-------A----------TG--GG-A
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11088344 16 +  39895028 a---------------atttt--t----t--aa-------a----------tg--gg-g
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             20348 16 +     74745 A---------------ATTCA--A----A--GG-------A----------TG--GA-G
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12706805 16 +  12821369 A---------------ATTCA--A----A--GG-------A----------TG--GA-G
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                2447 16 -      3136 A---------------ATTCA--A----A--GG-------A----------TG--GA-G
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           47265 16 +     63263 A---------------ATTCA--A----A--GG-------A----------TG--GA-G
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                 1970 16 -      2568 A---------------ATTCA--A----A--GG-------A----------TG--GA-G
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 2555 16 -      7381 A---------------ATTCA--A----A--GG-------A----------TG--GA-G
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  45772 16 -     79256 A---------------ATTCA--A----A--GG-------A----------TG--GA-G
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196035879 16 + 196197964 A---------------ATTCA--A----A--GG-------A----------TG--GA-G
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11446049 16 +  11645122 A---------------ATTCA--A----A--GG-------A----------TG--GA-G
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   4719 16 -     46448 A---------------ATTCA--A----A--GG-------A----------TG--GA-G
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                2393 16 -     13212 A---------------ATTCA--A----A--GG-------A----------TG--GA-G
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 16072 16 -     55006 A---------------ATTCA--A----A--GG-------A----------TG--GA-G
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43841188 16 +  43892939 A---------------ATTCA--A----A--GG-------A----------TG--GA-G
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               17358 16 -     24607 A---------------ATTCA--A----A--GG-------A----------TG--GA-G
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               4724 16 -     27140 A---------------ATTCA--A----A--GG-------A----------TG--GA-G
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43437773 16 -  43563597 A---------------ATTCA--A----A--GG-------A----------TG--GA-G
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4450593 16 -   4543643 A---------------ATTCA--A----A--GG-------A----------TG--GA-G
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            146277 16 +    252755 a---------------attaa--a----a--gg-------a----------TG--GG-G
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             36420 16 +     58827 A---------------ATTAA--A----A--GG-------A----------TG--GG-G
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36873897  8 +  64221397 A---------------ATGAA--A----T------------------------------
i Marmota_marmota.CZRN01000005.1                        C 0 I 6
s Megaderma_lyra.MegLyr_scaffold_3562                       64650 13 -    234502 A---------------ATGAC--A----A--GG-------A----------TG------
i Megaderma_lyra.MegLyr_scaffold_3562                   I 16 I 1
s Mellivora_capensis.MelCap_flattened_line_15433             1223 16 -     87323 A---------------ATTAA--A----A--AG-------A----------TG--GG-G
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               12949 16 +     15977 A---------------ATTAA--A----A--TC-------A----------CA--GG-G
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1047159 16 -  26018355 A---------------ACTAA--A----A--TC-------A----------CA--AG-G
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_227248                    527 16 -      1377 A---------------ATTAA--A----A--GA-------A----------TG--GG-G
i Mesoplodon_bidens.MesBid_scaffold_227248              C 0 C 0
s Microcebus_murinus.CM007691.1                          16510489  7 +  47401472 A---------------ATTAA--A-----------------------------------
i Microcebus_murinus.CM007691.1                         C 0 I 9
s Microgale_talazaci.MicTal_scaffold_34660                  34678 21 -     48017 A---------------GGTAA--A----G--AG-------AT-GGGGGGCAG-------
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               22919 13 -     32043 A---------------ATTAT--A----A--GG-------A----------TG------
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 I 1
s Microtus_ochrogaster.CM001673.1                        22820299 16 -  98408828 A---------------GTTAG--A----A--TC-------A----------CA--AG-G
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8209914  7 +  10048721 -------------------GT--A----A--GG-------A------------------
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            34568  7 +     45743 -------------------GT--A----A--GG-------A------------------
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         2322 16 +     29742 A---------------ATTCA--A----A--GG-------A----------TG--GA-G
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        11720 16 -    104932 A---------------ATTAA--A----A--AG-------A----------TG--GG-G
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     5878  7 +      8497 A---------------ATTAA--A-----------------------------------
i Mirza_zaza.k141_226143                                C 0 I 9
s Monodon_monoceros.MonMon_M_scaffold_5598                 146624 16 +    154973 A---------------ATTAA--A----A--GA-------A----------TG--GG-G
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                161442 13 +    265003 A---------------ATTAT--A----A--GG-------A----------TG------
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 I 1
s Moschus_moschiferus.MosMos_scaffold_78805                  1714 16 -     19904 A---------------ATTAA--A----A--GG-------A----------TG--GA-A
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 I 1
s Mungos_mungo.MunMun_flattened_line_8729                  145138 16 -    168139 A---------------ATGAA--A----G--GA-------A----------CA--GG-G
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          19752 13 -    100666 A---------------ATTAT--A----A--CA-------A----------TG------
i Murina_feae.MurFea_scaffold_2254                      C 0 I 1
s Mus_caroli.LT608236.1                                  70766792 16 +  92629107 A---------------AATAA--A----G--TC-------A----------CA--GA-G
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75489852 16 +  98207768 A---------------AATAA--A----A--TC-------A----------CA--GG-G
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67556085 16 +  89017189 a---------------aataa--a----a--tc-------a----------ca--gg-G
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74331028 16 +  97876770 a---------------aataa--a----a--tc-------a----------ca--gg-G
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             12058  6 +     98495 ----------------------------------------A----------TG--GA-A
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 3 C 0
s Mustela_putorius.JH417978.1                             4424592 16 -  28371801 a---------------attaa--a----a--ag-------a----------tG--CA-G
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myotis_brandtii.KE161952.1                               968063 13 +   8389877 A---------------ATTAT--A----A--CA-------A----------TG------
i Myotis_brandtii.KE161952.1                            C 0 I 1
s Myotis_davidii.KB114863.1                               5019736 13 +   6462685 A---------------ATTAT--A----A--CA-------A----------TG------
i Myotis_davidii.KB114863.1                             C 0 I 1
s Myotis_lucifugus.GL429887.1                             3465645 13 -   3747815 A---------------ATTAT--A----A--CA-------A----------TG------
i Myotis_lucifugus.GL429887.1                           C 0 I 1
s Myotis_myotis.MyoMyo_scaffold_6123                        10855 13 +     66751 A---------------ATTAT--A----A--CA-------A----------TG------
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 I 1
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             5247  7 -      8794 A---------------ATTTA--A-----------------------------------
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 I 8
s Nannospalax_galili.KL201303.1                            118899 16 +    362372 A---------------ATTAA--A----A--TC-------A----------CA--GG-G
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               8829 16 +     48152 G---------------ATTCA--A----A--GG-------A----------TG--CA-G
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4485111 16 -  14209539 a---------------attaa--a----a--ag-------a----------tG--GG-G
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3951236 16 -   4490290 A---------------ATTAA--A----A--GA-------A----------TG--GG-G
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  49955 13 +     94413 C---------------ATTAT--G----A--GA-------A----------TG------
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 I 1
s Nomascus_annamensis.k141_720788                             211 16 -      1065 A---------------ATTCA--A----A--GG-------A----------TG--GA-G
i Nomascus_annamensis.k141_720788                       C 0 C 0
s Nomascus_concolor.k141_226614                              1515 16 -      5092 A---------------ATTCA--A----A--GG-------A----------TG--GA-G
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_39679                              486 16 -     17937 A---------------ATTCA--A----A--GG-------A----------TG--GA-G
i Nomascus_gabriellae.k141_39679                        I 38 C 0
s Nomascus_siki_b.tarseq_80                             25233 16 -  18771707 A---------------ATTCA--A----A--GG-------A----------TG--GA-G
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  2936 16 +      4512 A---------------ATTCA--A----A--GG-------A----------TG--GA-G
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                31145 16 +   3668941 a---------------atttt--t----t--aa-------a----------tg--gg-g
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65567348 16 -  95554990 A---------------AGTAA--A----A--GG-------A----------TG--GG-A
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            4074 16 +      6470 A---------------AGTAA--A----A--GG-------A----------TG--GG-A
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65669683 16 +  89412551 A---------------AGTAA--A----A--GG-------A----------TG--GA-A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4996226 16 -  23139505 A---------------ATTAA--A----G--GG-------A----------TG--GG-A
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Odobenus_rosmarus.KB229369.1                             679777 16 -   3126709 a---------------attaa--a----a--ag-------a----------tG--GG-G
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1079920 16 +   1425656 A---------------ATTAA--A----A--GT-------A----------TG--GA-A
i Odocoileus_virginianus.KZ101650.1                     C 0 I 1
s Okapia_johnstoni.LVCL01S0017931.1                         37212 16 +     78940 a---------------attaa--a----a--gg-------a----------tg--ga-a
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 I 1
s Ondatra_zibethicus.OndZib_scaffold_6821                  125553 16 +    145789 A---------------ATTAG--A----A--TC-------A----------CA--AA-G
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  37339 16 +     62360 A---------------ATTAA--A----A--TC-------A----------CA--GG-G
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7224921 16 -   7562323 A---------------ATTAA--A----A--GA-------A----------TG--GG-G
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              57731 16 -     66828 A---------------ATTCA--G----A--GG-------A----------TA--GC-A
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141876512 16 + 163896628 A---------------ATTAA--A----A--GG-------A----------TG--GG-A
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      308428 16 -    505867 a---------------atttt--t----t--aa-------a----------tg--gg-g
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                         973 16 -     53940 A---------------AGGAA--A----A--GG-------A----------AA--GG-G
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18008953 16 -  38779656 a---------------aggaa--a----a--gg-------a----------aa--gg-a
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134077490 16 - 275406953 a---------------attaa--a----a--gg-------a----------tg--ga-a
i Ovis_aries.CM001582.2                                 C 0 I 1
s Ovis_canadensis.OviCan_scaffold_6251                      78705 16 +    140051 A---------------ATTAA--A----A--GG-------A----------TG--GA-A
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 I 1
s Pan_paniscus.CM003386.1                               127574946 16 - 205426864 A---------------ATTCA--A----A--GG-------A----------TG--GA-G
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120152100 16 - 196562556 A---------------ATTCA--A----A--GG-------A----------TG--GA-G
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  34553 16 +    295523 A---------------ATTAA--A----A--AG-------A----------TG--GG-G
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3638287 16 +  18214204 A---------------ATTAA--A----A--AG-------A----------TG--GG-G
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5027962 16 -   6340057 A---------------ATTAA--A----A--AG-------A----------TG--GG-G
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1066340 16 -   1292953 a---------------attaa--a----a--gg-------a----------tg--ga-a
i Pantholops_hodgsonii.KE114631.1                       C 0 I 1
s Papio_anubis.CM001492.2                               188156560 16 - 188283584 A---------------ATTCA--A----A--GG-------A----------TG--GA-G
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             4877 16 +      5367 A---------------ATTCA--A----A--GG-------A----------TG--GA-G
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47513945 16 +  47705337 A---------------ATTCA--A----A--GG-------A----------TG--GA-G
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 67921 16 -    104429 A---------------ATTCA--A----A--GG-------A----------TG--GA-G
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    6457 16 +     14967 A---------------ATTCA--A----A--GG-------A----------TG--GA-G
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 2316 16 -      7628 A---------------ATTCA--A----A--GG-------A----------TG--GA-G
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    116015 16 -    135482 A---------------ATTAA--A----A--GG-------A----------TG--GA-G
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           5664 16 -     23713 A---------------AGTAA--A----A--GG-------A----------TG--GG-G
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            24977 16 -     27972 A---------------AGTAA--A----A--GG-------A----------TG--GG-G
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      44810 16 -     45160 A---------------GTGAA--A----A--TG-------C----------TA--CA-A
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4950590 16 -   8017169 A---------------ATTAA--A----A--TC-------A----------CA--GG-G
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    12663 16 -     36578 G---------------ATCTA--A----G--TG-------A----------TA--AG-G
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            121526 16 -    122454 A---------------ATTAA--A----A--GA-------A----------TG--GG-G
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1987485                           2343 16 -      5908 G---------------ATTCA--A----A--GG-------A----------TG--GA-G
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       2967 16 -     17985 G---------------ATTCA--A----A--GG-------A----------TG--GA-G
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            2334 16 +      7694 G---------------ATTCA--A----A--GG-------A----------TG--GA-G
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26740812 16 +  26888534 G---------------ATTCA--A----A--GG-------A----------TG--GA-G
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            97680 13 +    112873 A---------------ATTAT--A----A--CA-------A----------TG------
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 I 1
s Pithecia_albicans.k141_991845                             44076 16 -     61926 A---------------ATTAA--A----A--GG-------A----------TG--GA-G
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        25461 16 +     78826 A---------------ATTAA--A----A--GG-------A----------TG--GA-G
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              9508 16 -     15800 A---------------ATTAA--A----A--GG-------A----------TG--GA-G
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        12707 16 -     16101 A---------------ATTAA--A----A--GG-------A----------TG--GA-G
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          5935 16 +      9673 A---------------ATTAA--A----A--GG-------A----------TG--GA-G
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13474935 16 -  19735023 A---------------ATTAA--A----A--GG-------A----------TG--GA-G
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           13838 16 -     31692 A---------------ATTAA--A----A--GG-------A----------TG--GA-G
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           5612 16 +     21690 A---------------ATTAA--A----A--GA-------A----------TG--GG-G
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       23178 16 +     44506 A---------------ATTAA--A----A--GG-------A----------TG--GA-G
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        23390 16 +     67491 A---------------ATTAA--A----A--GG-------A----------TG--GA-G
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      13630 16 -     98129 A---------------ATTAA--A----A--GG-------A----------TG--GA-G
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     23230 16 +    147771 A---------------ATTAA--A----A--GG-------A----------TG--GA-G
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        23487 16 -     23762 A---------------ATTAA--A----A--GG-------A----------TG--GA-G
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          3949 16 -     55515 A---------------ATTAA--A----A--GG-------A----------TG--GA-G
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         23303 16 +    152463 A---------------ATTAA--A----A--GG-------A----------TG--GA-G
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       1020 16 -    119457 A---------------ATTAA--A----A--GG-------A----------TG--GA-G
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         13026 16 +    134592 A---------------ATTAA--A----A--GG-------A----------TG--GA-G
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          23613 16 -     75465 A---------------ATTAA--A----A--GG-------A----------TG--GA-G
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              187466 16 -    373494 A---------------ATTCA--A----A--GG-------A----------TG--GA-G
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19808114 16 +  19899266 A---------------ATTCA--A----A--GG-------A----------TG--GA-G
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               6073 16 -     15069 G---------------ATTCA--A----A--GG-------A----------TG--CA-G
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              6203 16 +     14865 G---------------ATTCA--A----A--GG-------A----------TG--CA-G
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                2167 16 -      9567 A---------------ATTAA--A----A--TG-------A----------AG--AT-A
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6848849 12 +  12164890 ----------------------------A--GGGTGG-G-G----------GA--G---
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     17151 19 -     30946 A---------------ATTAA--A----A--GGGAGG---G----------GG---G-G
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         3912  8 +     11805 A---------------ATTAA--A----G------------------------------
i Propithecus_coronatus.k141_1353159                    C 0 I 7
s Propithecus_diadema.k141_577245                           43251 19 +     52369 A---------------ATTAA--A----A--GGGAGG---G----------GG---G-G
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         35638 19 -     44753 A---------------ATTAA--A----A--GGGAGG---G----------GG---G-G
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            17562 19 +     27322 A---------------ATTAA--A----A--GGGAGG---G----------GG---G-G
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       17198 19 -     53241 A---------------ATTAA--A----A--GGGAGG---G----------GG---G-G
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         39462 19 -     48185 A---------------ATTAA--A----A--GGGAGG---G----------GG---G-G
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           34497 16 +     77221 A---------------ATTAA--A----A--TC-------A----------AA--GG-G
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            4087 13 -     27784 a---------------attat--a----a--gg-------A----------TG------
i Pteronotus_parnellii.KE867983.1                       C 0 I 1
s Pteronura_brasiliensis.PteBra_flattened_line_1343        246902 16 -    344369 A---------------ATTAA--A----A--AG-------A----------TG--GG-G
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13246204 13 -  17261082 A---------------ATTAT--A----A--GA-------A----------TG------
i Pteropus_alecto.KB031157.1                            C 0 I 1
s Pteropus_vampyrus.KN525959.1                             604155 13 -   3946241 A---------------ATTAT--A----A--GA-------A----------TG------
i Pteropus_vampyrus.KN525959.1                          C 0 I 1
s Puma_concolor.QAVW01000427.1                          131534540 16 - 161321710 A---------------ATTAA--A----A--AG-------A----------TG--GG-G
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             30194 16 +     56732 G---------------ATTCA--A----A--GG-------A----------TG--CA-G
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6806682 16 +   6970761 G---------------ATTCA--A----A--GG-------A----------TG--CA-G
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             6073 16 +     18040 G---------------ATTCA--A----A--GG-------A----------TG--CA-G
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                15999 16 +     68503 A---------------ATTAA--A----A--GT-------A----------TG--GA-A
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 I 1
s Rattus_norvegicus.chr11                                13915794 16 +  90463843 a---------------aataa--a----a--cc-------a----------ca--gg-G
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1788031 13 +   2252614 A---------------ATTAT--A----A--GG-------A----------TG------
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 I 1
s Rhinopithecus_bieti.k119_554384                             485 16 -     17045 G---------------ATTCA--A----A--GG-------A----------TG--CA-G
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206377962 16 - 206558726 G---------------ATTCA--A----A--GG-------A----------TG--CA-G
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44856876 16 -  45163003 G---------------ATTCA--A----A--GG-------A----------TG--CA-G
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                19545  6 +    109198 ----------------------------A--GA-------A----------TG------
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            I 1 I 1
s Saiga_tatarica.SaiTat_scaffold_82192                       8166 16 +     12214 A---------------ATTAA--A----A--GG-------A----------TG--GA-A
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 I 1
s Saimiri_boliviensis.NW_024100938.1                     15673040 16 -  43202129 A---------------ATTAA--A----A--GA-------A----------TG--GA-G
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        4953 16 +     34089 A---------------ATTAA--A----A--GA-------A----------TG--GA-G
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              4895 16 -     60842 A---------------ATTAA--A----A--GA-------A----------TG--GA-G
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              4988 16 +     67014 A---------------ATTAA--A----A--GA-------A----------TG--GA-G
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              4966 16 +     60816 A---------------ATTAA--A----A--GA-------A----------TG--GA-G
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 4903 16 -     76454 A---------------ATTAA--A----A--GA-------A----------TG--GA-G
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17341628 16 -  30362882 A---------------ATTAA--A----A--AG-------A----------TG--GA-G
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         20989 16 -     62485 A---------------ATTAA--A----A--AG-------A----------TG--GA-G
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   32507 16 -    114521 A---------------CTCAA--A----A--GG-------A----------TG--GG-A
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        3686 16 +     15331 G---------------ATTCA--A----A--GG-------A----------TG--CA-G
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       9079 16 +     20762 G---------------ATTCA--A----A--GG-------A----------TG--CA-G
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         119082 16 +    130994 G---------------ATTCA--A----A--GG-------A----------TG--CA-G
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           37868 16 +     46263 G---------------ATTCA--A----A--GG-------A----------TG--CA-G
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     30988 16 +     42640 G---------------ATTCA--A----A--GG-------A----------TG--CA-G
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        14028 16 +     30600 G---------------ATTCA--A----A--GG-------A----------TG--CA-G
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  100534 20 -    120886 A---------------ATTAA--GATAGA--TC-------A----------CA--GG-G
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            19089 16 +    739146 A---------------ATTAA--A----A--GG-------A----------TG--CA-G
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17765573 18 -  27805282 C---------------ATCAAAAA----A--GG-------A----------CA--TG-G
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2239989  8 +   2842873 A---------------ATGAA--A----T------------------------------
i Spermophilus_dauricus.KZ294190.1                      C 0 I 6
s Spilogale_gracilis.SpiGra_flattened_line_905             235022 16 -    276980 A---------------ATTAA--A----A--AG-------T----------TG--GG-G
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            27798 16 +     62062 A---------------ATGAA--A----G--GA-------A----------CG--GG-G
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189272078 16 + 218635234 A---------------ATTAA--A----A--GG-------A----------TG--GG-G
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        15218 16 -  13920577 A---------------ATTCA--A----A--GG-------A----------TG--GA-G
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                 466 13 +     20549 A---------------ATTAT--A----A--GG-------A----------TG------
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 I 1
s Tamandua_tetradactyla.TamTet_scaffold_26877               14910 16 +     45698 A---------------ATTTA--A----A--AA-------A----------TG--GG-A
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      807331 16 +   1148477 A---------------ATTAA--A----A--GA-------A----------TG--GA-G
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  58042 16 +     99546 A---------------ATTAA--A----A--GA-------A----------TG--GA-G
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               26759 14 +     42269 A---------------ATTAA--A----A--G--------A----------TG--G--G
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               60075 14 +     65473 A---------------ATTAA--A----A--G--------A----------TG--G--G
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194008082 16 - 194193292 A---------------ATTCA--A----A--GG-------A----------TG--GA-G
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  5730 16 +      6782 A---------------ATTAA--A----A--GA-------A----------TG--GG-A
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  136079 13 -    259118 A---------------ATTAT--A----A--GG-------A----------CG------
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 I 1
s Trachypithecus_auratus.k141_738098                        27184 16 +     38948 G---------------ATTCA--A----A--GG-------A----------TG--CA-G
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   20916 16 -     32910 G---------------ATTCA--A----A--GG-------A----------TG--CA-G
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      2302 16 -     12939 G---------------ATTCA--A----A--GG-------A----------TG--CA-G
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       2238 16 -     14244 G---------------ATTCA--A----A--GG-------A----------TG--CA-G
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           43637 16 -     54611 G---------------ATTCA--A----A--GG-------A----------TG--CA-G
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        1440 16 -     11566 G---------------ATTCA--A----A--GG-------A----------TG--CA-G
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     3617 16 -     15592 G---------------ATTCA--A----A--GG-------A----------TG--CA-G
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          2273 16 +     14371 G---------------ATTCA--A----A--GG-------A----------TG--CA-G
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                    554 16 +     12481 G---------------ATTCA--A----A--GG-------A----------TG--CA-G
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                         430 16 -     24393 G---------------ATTCA--A----A--GG-------A----------TG--CA-G
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       5676 16 -     28054 G---------------ATTCA--A----A--GG-------A----------TG--CA-G
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44660476 16 -  44834318 G---------------ATTCA--A----A--GG-------A----------TG--CA-G
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       2784 16 +     13828 G---------------ATTCA--A----A--GG-------A----------TG--CA-G
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   5393 16 +     90398 A---------------ATTAA--A----A--GG-------A----------CA--GG-G
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16085111 16 +  31416278 A---------------ATTAA--A----A--GG-------A----------TG--GG-A
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2793129 16 -   3938065 A---------------ATTAA--A----A--GG-------A----------TG--GA-G
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    5329 16 +     13056 A---------------ATTAA--A----A--GG-------A----------TG--GA-G
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69313637 16 -  96451834 A---------------ATTAA--A----A--GA-------A----------TG--GG-G
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   1539 16 +     10241 A---------------ATTAA--A----A--GG-------A----------TG--GA-G
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6515031 16 +  28682327 a---------------attaa--a----a--ag-------a----------tG--GG-G
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  5552  6 -     20643 ----------------------------------------T----------GG--GG-G
i Varecia_rubra.k141_432109                             I 3 C 0
s Varecia_variegata.k141_775891                             25093  6 -     33872 ----------------------------------------T----------GG--GG-G
i Varecia_variegata.k141_775891                         I 3 C 0
s Vicugna_pacos.KN269600.1                                1524883 16 -   2331223 A---------------ATTAA--A----A--GG-------A----------TG--GG-G
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                138525 16 -    281493 A---------------ATTTT--T----T--AA-------A----------TG--GG-G
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       127103  8 -    134049 A---------------ATGAA--A----T------------------------------
i Xerus_inauris.XerIna_scaffold_7898                    C 0 I 6
s Zalophus_californianus.ZalCal_flattened_line_4097        214504 16 -    227762 A---------------ATTAA--A----A--AG-------A----------TG--GG-G
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     15209 16 -     20485 G---------------ATTCG--A----A--TC-------A----------CA--GG-G
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           7136 16 -      8775 A---------------ATTAA--A----A--GA-------A----------TG--GG-G
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                701732 90 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             38964  0 -     47444 C
e Elephantulus_edwardii.JH947210.1                        7816071 13 +  15467074 I
e Crocidura_indochinensis.CroInd_scaffold_848148              199  0 +      1327 C
e Hylobates_klossii.k141_285563                               343 193 +      1026 I
e Octodon_degus.JH651621.1                                3685767  0 +  10294119 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     90228  0 -    117718 C
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 30936  0 -     67205 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               12079 1 +    209709 A
s Acinonyx_jubatus.LLWD01000356.1                         2034217 1 +   3721120 A
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10657555 1 +  23371972 G
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7094902 1 -  16596857 G
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   17117 1 -     22067 A
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   1589 1 -     60446 A
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         2309 1 -     29318 A
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         1244 1 +     38766 A
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          2203 1 -     80423 A
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            10506 1 -     18050 A
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_1710068                                219 1 +      1555 A
i Alouatta_caraya.k141_1710068                          C 0 C 0
s Alouatta_discolor.k141_811576                             11179 1 -     21359 A
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                 798 1 +      2129 A
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_2177643                           182 1 -      1868 A
i Alouatta_macconnelli.k141_2177643                     C 0 C 0
s Alouatta_nigerrima.k141_3537692                             231 1 +      1660 A
i Alouatta_nigerrima.k141_3537692                       C 0 C 0
s Alouatta_palliata.k141_2764429                              148 1 -      1480 A
i Alouatta_palliata.k141_2764429                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            4224 1 -      4927 A
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_1531728                             363 1 -      1692 A
i Alouatta_seniculus.k141_1531728                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3520356 1 +   4113121 C
i Ammotragus_lervia.NIVO01013474.1                      I 1 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      390552 1 -    631301 G
i Anoura_caudifer.AnoCau_scaffold_422                   I 1 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            30937 1 +     33004 A
i Antilocapra_americana.AntAmePen_scaffold_42841        I 1 C 0
s Aotus_azarae.k141_3170768                                 62858 1 +     78111 A
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            5800 1 +     22701 A
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5749757 1 +   9889416 A
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             6346 1 -    104377 A
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               6348 1 +     23246 A
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     3914 1 +      5067 G
i Aplodontia_rufa.AprRuf_scaffold_156013                I 3 C 0
s Arctocebus_calabarensis.k141_587554                        1277 1 +      9265 G
i Arctocebus_calabarensis.k141_587554                   I 3 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 8957 1 -     29036 G
i Artibeus_jamaicensis.ArtJam_scaffold_41619            I 1 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9539617 1 +  39197703 A
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             60888 1 +     85812 A
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                11901 1 +     89302 A
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             16404 1 -     58268 A
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             64396 1 +    119057 A
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               6367 1 -     25888 A
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 7012 1 -     16375 C
i Avahi_laniger.k141_2840928                            I 1 C 0
s Avahi_peyrierasi.k141_798820                                631 1 +      6337 C
i Avahi_peyrierasi.k141_798820                          I 1 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26380426 1 +  51448160 G
i Balaenoptera_acutorostrata.KI537095.1                 I 6 C 0
s Balaenoptera_bonaerensis.DF502048.1                        5598 1 -     13118 G
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   43426 1 -     72089 A
i Beatragus_hunteri.BeaHun_scaffold_21644               I 1 C 0
s Bison_bison.KN264915.1                                  6560089 1 +   6870073 a
i Bison_bison.KN264915.1                                I 1 C 0
s Bos_indicus.CM003021.1                                138140198 1 - 161108492 a
i Bos_indicus.CM003021.1                                I 1 C 0
s Bos_mutus.JH883513.1                                     572739 1 -    998990 a
i Bos_mutus.JH883513.1                                  I 1 C 0
s Bos_taurus.CM000177.6                                 136295931 1 - 158972876 a
i Bos_taurus.CM000177.6                                 I 1 C 0
s Bubalus_bubalis.KI419065.1                              1233010 1 -   1914593 a
i Bubalus_bubalis.KI419065.1                            I 1 C 0
s Cacajao_ayresi.k141_724503                               114254 1 -    171031 A
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 13283 1 +    125063 A
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                15326 1 -    216513 A
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        7869 1 -    134917 A
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3219794 1 -   8989139 G
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           397495 1 -  15254737 G
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2973231 1 +   6889770 G
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11519703 1 +  39901454 G
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   14728 1 +     87036 G
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11266370 1 -  35597290 g
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11088904 1 +  39895921 g
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16455919 1 -  44759192 g
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21325432 1 + 157394656 C
i Capra_aegagrus.CM003214.1                             I 1 C 0
s Capra_hircus.CM004562.1                               135706660 1 - 157403528 C
i Capra_hircus.CM004562.1                               I 1 C 0
s Carlito_syrichta.NW_007248099.1                          309299 1 +    345090 A
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               59748 1 +     67245 G
i Carollia_perspicillata.CarPer_scaffold_4436           I 1 C 0
s Castor_canadensis.CasCan_scaffold_47037                   31355 1 +     33760 A
i Castor_canadensis.CasCan_scaffold_47037               I 398 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   159116 1 -    276539 G
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15786827 1 -  24422027 G
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15798763 1 -  24440124 G
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       176954 1 +    436027 G
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18891100 1 -  29618158 A
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 8644 1 -     26817 A
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                12887 1 +     25043 A
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         8327 1 +     21754 A
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4364108 1 +   7569818 A
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         3865 1 -      9338 A
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6555535 1 +   6739814 A
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      27012 1 +     60454 A
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          2218 1 -     21101 A
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         59527 1 -    107033 A
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        2417 1 -     17608 A
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          29913 1 +     30494 A
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          58758 1 -     59240 A
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          2459 1 +     16677 A
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           24618 1 +     35983 A
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11991144 1 +  12117833 A
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46477904 1 +  46592721 A
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      41455 1 -     45581 A
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       2460 1 +     35577 A
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        2236 1 -     25661 A
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        2215 1 -     17744 A
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        21830 1 +     37128 A
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           2988 1 -      6963 G
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           59295 1 -     68416 C
i Cheirogaleus_major.k141_1157592                       I 9 C 0
s Cheirogaleus_medius.k141_133808                            8340 1 +     13308 C
i Cheirogaleus_medius.k141_133808                       I 9 C 0
s Cheracebus_lucifer.k141_619653                             5911 1 -     18223 A
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             22931 1 +     25473 A
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           41969 1 +     57117 A
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          46648 1 +     54541 A
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15961970 1 +  43084221 G
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         71455 1 +    196370 A
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          15635 1 +     40510 A
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15139350 1 -  15256731 A
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      34431 1 -     53260 A
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101144991 1 + 101219884 A
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                16693 1 -     21363 G
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           761996 1 +    964067 G
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10886760 1 +  10971483 A
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147664925 1 + 156195979 A
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            16910 1 +     23629 A
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60613822 1 +  78930452 A
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         39932 1 -     40477 g
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     I 1 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 278805 1 -    399297 G
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53029466 1 +  72327488 G
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            52253 1 -     70449 G
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  208452 1 -    956709 G
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                18005 1 +     26546 G
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             59094 1 -    236241 G
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          183873 1 -   6883506 G
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16845147 1 +  31942871 A
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80037050 1 -  96802777 G
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18699024 1 -  18957592 G
i Desmodus_rotundus.KZ672188.1                          I 1 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 322757 1 +    993696 A
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   3411 1 +    151128 A
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   157234 1 +    228994 G
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 28186 1 +     28912 A
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                36323 1 -     73477 G
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22998697 1 -  44670279 G
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 12487 1 +     24177 G
i Eidolon_helvum.KE772537.1                             I 1 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1491706 1 +   1727528 A
i Elaphurus_davidianus.JRFZ01086400.1                   I 1 C 0
s Ellobius_lutescens.LOEQ01003611.1                        240019 1 -    369425 G
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           7126 1 -      7838 G
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85872427 1 +  99434291 G
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4704396 1 +   6522550 G
i Eptesicus_fuscus.JH977687.1                           I 1 C 0
s Equus_asinus.JREZ01000062.1                             5853207 1 -   7175178 G
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13351712 1 +  41866177 G
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          13201 1 +     92910 G
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11534487 1 +  16010500 G
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48774118 1 -  48907691 A
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          315268 1 +    330699 G
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             61719 1 +     89355 G
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              5347 1 +     13586 G
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               5278 1 -      6809 G
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            11755 1 +     36558 G
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             8076 1 +     60246 G
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                11552 1 +    109717 G
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               15938 1 +     16540 G
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                16213 1 +     27497 G
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           18670 1 +     26808 G
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                33408 1 +     46535 G
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              16132 1 -     29447 G
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129893176 1 - 159252932 G
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129280268 1 - 158578461 G
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 21408 1 +     52776 G
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Galago_moholi.ctg555                                     211171 1 -    847004 G
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           13545 1 -     43889 G
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          10619 1 +     27357 G
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               156525 1 +    324696 G
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    181500 1 -    189561 a
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 1 I 1
s Glis_glis.GliGli_scaffold_79770                           13308 1 -     18683 A
i Glis_glis.GliGli_scaffold_79770                       I 6 C 0
s Gorilla_beringei.k141_111300                               5596 1 -     14630 A
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119652696 1 - 195582420 A
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   77837 1 +    118900 A
i Graphiurus_murinus.GraMur_scaffold_4493               I 6 C 0
s Hapalemur_alaotrensis.k141_1280836                         2123 1 +     10286 G
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                              600 1 -     11661 G
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             5929 1 +     56096 G
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        29180 1 -     42470 G
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        45803 1 -     54384 G
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              17459 1 +     53719 G
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                27716 1 -     91191 A
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 1 C 0
s Heterocephalus_glaber.JH602058.1                        2551327 1 +  31725842 G
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               61073 1 +     73687 G
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              147354 1 +    277961 G
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      278621 1 -    477199 G
i Hipposideros_armiger.JXIK01001085.1                   I 1 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              7767 1 -      9143 G
i Hipposideros_galeritus.HipGal_scaffold_104691         I 1 C 0
s Hoolock_leuconedys.ctg79                                      5002 1 -   7690867 A
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 17528 1 -     67322 G
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19238 1 -    119109 G
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_164775                              2058 1 +      2073 A
i Hylobates_abbotti.k141_164775                         C 0 C 0
s Hylobates_agilis.k141_1878600                               320 1 -      1230 A
i Hylobates_agilis.k141_1878600                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14624973 1 -  25970782 A
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            2229 1 -      2977 A
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             34132 1 -     60944 A
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     6393 1 +     22540 G
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7126087 1 +  13083262 G
i Ictidomys_tridecemlineatus.JH393315.1                 I 6 C 0
s Indri_indri.k141_5141390                                    645 1 -      3181 C
i Indri_indri.k141_5141390                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               9255 1 +     17520 G
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8566129 1 +  11848649 A
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               23867 1 +     37189 G
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          50486 1 -    147782 A
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   114668 1 -    115756 G
i Lasiurus_borealis.LasBor_scaffold_5102                I 1 C 0
s Lemur_catta.scaffold_1                                258407484 1 - 285822530 G
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        24231 1 +     39228 G
i Lepilemur_ankaranensis.k141_884009                    I 9 C 0
s Lepilemur_dorsalis.k141_134267                            53615 1 +     63517 G
i Lepilemur_dorsalis.k141_134267                        I 9 C 0
s Lepilemur_ruficaudatus.k141_617879                        78879 1 +    116806 G
i Lepilemur_ruficaudatus.k141_617879                    I 9 C 0
s Lepilemur_septentrionalis.k141_578524                     31870 1 -     33031 G
i Lepilemur_septentrionalis.k141_578524                 I 9 C 0
s Leptonychotes_weddellii.KB714749.1                      3086220 1 -   3498232 G
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    13494 1 +     22452 G
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            136211 1 +   3060487 G
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19248629 1 +  19376315 A
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           10920 1 +     84689 G
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3778669 1 +   6799190 G
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20594454 1 -  62548349 G
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11088360 1 +  39895028 g
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             20364 1 +     74745 A
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12706821 1 +  12821369 A
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                2463 1 -      3136 A
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           47281 1 +     63263 A
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                 1986 1 -      2568 A
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 2571 1 -      7381 A
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  45788 1 -     79256 A
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196035895 1 + 196197964 A
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11446065 1 +  11645122 A
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   4735 1 -     46448 A
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                2409 1 -     13212 A
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 16088 1 -     55006 A
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43841204 1 +  43892939 A
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               17374 1 -     24607 A
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               4740 1 -     27140 A
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43437789 1 -  43563597 A
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4450609 1 -   4543643 A
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            146293 1 +    252755 T
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             36436 1 +     58827 T
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36873911 1 +  64221397 G
i Marmota_marmota.CZRN01000005.1                        I 6 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       64664 1 -    234502 C
i Megaderma_lyra.MegLyr_scaffold_3562                   I 1 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             1239 1 -     87323 G
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               12965 1 +     15977 A
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1047175 1 -  26018355 G
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_227248                    543 1 -      1377 G
i Mesoplodon_bidens.MesBid_scaffold_227248              C 0 C 0
s Microcebus_murinus.CM007691.1                          16510505 1 +  47401472 C
i Microcebus_murinus.CM007691.1                         I 9 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  34699 1 -     48017 G
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               22933 1 -     32043 G
i Micronycteris_hirsuta.MicHir_scaffold_37978           I 1 C 0
s Microtus_ochrogaster.CM001673.1                        22820315 1 -  98408828 G
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         2338 1 +     29742 A
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        11736 1 -    104932 G
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     5894 1 +      8497 C
i Mirza_zaza.k141_226143                                I 9 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 146640 1 +    154973 G
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                161456 1 +    265003 G
i Mormoops_blainvillei.MorMeg_scaffold_2952             I 1 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  1731 1 -     19904 A
i Moschus_moschiferus.MosMos_scaffold_78805             I 1 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  145154 1 -    168139 G
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          19766 1 -    100666 G
i Murina_feae.MurFea_scaffold_2254                      I 1 C 0
s Mus_caroli.LT608236.1                                  70766808 1 +  92629107 G
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75489868 1 +  98207768 G
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67556101 1 +  89017189 G
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74331044 1 +  97876770 G
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             12064 1 +     98495 A
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4424608 1 -  28371801 G
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myotis_brandtii.KE161952.1                               968077 1 +   8389877 G
i Myotis_brandtii.KE161952.1                            I 1 C 0
s Myotis_davidii.KB114863.1                               5019750 1 +   6462685 G
i Myotis_davidii.KB114863.1                             I 1 C 0
s Myotis_lucifugus.GL429887.1                             3465659 1 -   3747815 G
i Myotis_lucifugus.GL429887.1                           I 1 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        10869 1 +     66751 G
i Myotis_myotis.MyoMyo_scaffold_6123                    I 1 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             5262 1 -      8794 G
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        I 8 C 0
s Nannospalax_galili.KL201303.1                            118915 1 +    362372 A
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               8845 1 +     48152 A
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4485127 1 -  14209539 G
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3951252 1 -   4490290 G
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  49969 1 +     94413 G
i Noctilio_leporinus.NocLep_scaffold_12062              I 1 C 0
s Nomascus_annamensis.k141_720788                             227 1 -      1065 A
i Nomascus_annamensis.k141_720788                       C 0 I 5
s Nomascus_concolor.k141_226614                              1531 1 -      5092 A
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_39679                              502 1 -     17937 A
i Nomascus_gabriellae.k141_39679                        C 0 C 0
s Nomascus_siki_b.tarseq_80                             25249 1 -  18771707 A
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  2952 1 +      4512 A
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                31161 1 +   3668941 g
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65567364 1 -  95554990 G
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            4090 1 +      6470 G
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65669699 1 +  89412551 G
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4996242 1 -  23139505 G
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Odobenus_rosmarus.KB229369.1                             679793 1 -   3126709 G
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1079937 1 +   1425656 A
i Odocoileus_virginianus.KZ101650.1                     I 1 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         37229 1 +     78940 a
i Okapia_johnstoni.LVCL01S0017931.1                     I 1 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  125569 1 +    145789 G
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  37355 1 +     62360 G
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7224937 1 -   7562323 G
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              57747 1 -     66828 G
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141876528 1 + 163896628 G
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      308444 1 -    505867 g
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                         989 1 -     53940 G
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18008969 1 -  38779656 g
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134077507 1 - 275406953 a
i Ovis_aries.CM001582.2                                 I 1 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      78722 1 +    140051 A
i Ovis_canadensis.OviCan_scaffold_6251                  I 1 C 0
s Pan_paniscus.CM003386.1                               127574962 1 - 205426864 A
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120152116 1 - 196562556 A
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  34569 1 +    295523 G
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3638303 1 +  18214204 G
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5027978 1 -   6340057 G
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1066357 1 -   1292953 a
i Pantholops_hodgsonii.KE114631.1                       I 1 C 0
s Papio_anubis.CM001492.2                               188156576 1 - 188283584 A
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             4893 1 +      5367 A
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47513961 1 +  47705337 A
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 67937 1 -    104429 A
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    6473 1 +     14967 A
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 2332 1 -      7628 A
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    116031 1 -    135482 G
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           5680 1 -     23713 G
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            24993 1 -     27972 G
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      44826 1 -     45160 A
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4950606 1 -   8017169 G
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    12679 1 -     36578 G
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            121542 1 -    122454 G
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1987485                           2359 1 -      5908 A
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       2983 1 -     17985 A
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            2350 1 +      7694 A
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26740828 1 +  26888534 A
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            97694 1 +    112873 G
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        I 1 C 0
s Pithecia_albicans.k141_991845                             44092 1 -     61926 A
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        25477 1 +     78826 A
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              9524 1 -     15800 A
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        12723 1 -     16101 A
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          5951 1 +      9673 A
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13474951 1 -  19735023 A
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           13854 1 -     31692 A
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           5628 1 +     21690 G
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       23194 1 +     44506 A
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        23406 1 +     67491 A
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      13646 1 -     98129 A
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     23246 1 +    147771 A
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        23503 1 -     23762 A
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          3965 1 -     55515 A
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         23319 1 +    152463 A
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       1036 1 -    119457 A
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         13042 1 +    134592 A
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          23629 1 -     75465 A
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              187482 1 -    373494 A
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19808130 1 +  19899266 A
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               6089 1 -     15069 A
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              6219 1 +     14865 A
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                2183 1 -      9567 G
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6848861 1 +  12164890 G
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     17170 1 -     30946 C
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         3927 1 +     11805 C
i Propithecus_coronatus.k141_1353159                    I 7 C 0
s Propithecus_diadema.k141_577245                           43270 1 +     52369 C
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         35657 1 -     44753 C
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            17581 1 +     27322 C
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       17217 1 -     53241 C
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         39481 1 -     48185 C
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           34513 1 +     77221 G
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            4101 1 -     27784 G
i Pteronotus_parnellii.KE867983.1                       I 1 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        246918 1 -    344369 G
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13246218 1 -  17261082 G
i Pteropus_alecto.KB031157.1                            I 1 C 0
s Pteropus_vampyrus.KN525959.1                             604169 1 -   3946241 G
i Pteropus_vampyrus.KN525959.1                          I 1 C 0
s Puma_concolor.QAVW01000427.1                          131534556 1 - 161321710 A
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             30210 1 +     56732 A
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6806698 1 +   6970761 A
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             6089 1 +     18040 A
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                16016 1 +     68503 A
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 1 C 0
s Rattus_norvegicus.chr11                                13915810 1 +  90463843 G
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1788045 1 +   2252614 G
i Rhinolophus_sinicus.LVEH01000179.1                    I 1 C 0
s Rhinopithecus_bieti.k119_554384                             501 1 -     17045 A
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206377978 1 - 206558726 G
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44856892 1 -  45163003 A
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                19552 1 +    109198 G
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            I 1 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       8183 1 +     12214 A
i Saiga_tatarica.SaiTat_scaffold_82192                  I 1 C 0
s Saimiri_boliviensis.NW_024100938.1                     15673056 1 -  43202129 G
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        4969 1 +     34089 G
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              4911 1 -     60842 G
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              5004 1 +     67014 G
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              4982 1 +     60816 G
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 4919 1 -     76454 G
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17341644 1 -  30362882 A
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         21005 1 -     62485 A
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   32523 1 -    114521 A
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        3702 1 +     15331 A
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       9095 1 +     20762 A
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         119098 1 +    130994 A
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           37884 1 +     46263 A
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     31004 1 +     42640 A
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        14044 1 +     30600 A
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  100554 1 -    120886 G
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            19105 1 +    739146 G
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17765591 1 -  27805282 A
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2240003 1 +   2842873 G
i Spermophilus_dauricus.KZ294190.1                      I 6 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             235038 1 -    276980 G
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            27814 1 +     62062 G
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189272094 1 + 218635234 G
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        15234 1 -  13920577 A
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                 480 1 +     20549 G
i Tadarida_brasiliensis.TadBra_scaffold_61492           I 1 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               14926 1 +     45698 G
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      807347 1 +   1148477 G
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  58058 1 +     99546 G
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               26773 1 +     42269 A
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               60089 1 +     65473 A
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194008098 1 - 194193292 A
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  5746 1 +      6782 G
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  136093 1 -    259118 G
i Tonatia_saurophila.TonSau_scaffold_3334               I 1 C 0
s Trachypithecus_auratus.k141_738098                        27200 1 +     38948 A
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   20932 1 -     32910 A
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      2318 1 -     12939 A
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       2254 1 -     14244 A
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           43653 1 -     54611 A
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        1456 1 -     11566 A
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     3633 1 -     15592 A
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          2289 1 +     14371 A
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                    570 1 +     12481 A
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                         446 1 -     24393 A
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       5692 1 -     28054 A
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44660492 1 -  44834318 A
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       2800 1 +     13828 A
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   5409 1 +     90398 G
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16085127 1 +  31416278 G
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2793145 1 -   3938065 G
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    5345 1 +     13056 G
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69313653 1 -  96451834 G
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   1555 1 +     10241 A
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6515047 1 +  28682327 G
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  5558 1 -     20643 A
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             25099 1 -     33872 A
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1524899 1 -   2331223 G
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                138541 1 -    281493 G
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       127117 1 -    134049 G
i Xerus_inauris.XerIna_scaffold_7898                    I 6 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        214520 1 -    227762 G
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     15225 1 -     20485 A
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 I 217
s Ziphius_cavirostris.ZipCav_flattened_line_127025           7152 1 -      8775 G
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                701732 90 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             38964 0 -     47444 C
e Dipodomys_ordii.KN672545.1                              3656546 0 +   4240102 C
e Miniopterus_schreibersii.MinSch_scaffold_24116            34575 0 +     45743 C
e Miniopterus_natalensis.LDJU01000022.1                   8209921 0 +  10048721 C
e Elephantulus_edwardii.JH947210.1                        7816071 13 +  15467074 I
e Crocidura_indochinensis.CroInd_scaffold_848148              199 0 +      1327 C
e Hylobates_klossii.k141_285563                               343 193 +      1026 I
e Octodon_degus.JH651621.1                                3685767 0 +  10294119 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     90228 0 -    117718 C
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 30936 0 -     67205 C
e Acomys_cahirinus.AcoCah_scaffold_1625                    112833 0 -    189883 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               12080 5 +    209709 AA-TT-C
s Acinonyx_jubatus.LLWD01000356.1                         2034218 5 +   3721120 AT-TT-C
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    112833 5 -    189883 GA-TT-C
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10657556 5 +  23371972 AT-TT-C
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7094903 5 -  16596857 AT-TT-C
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   17118 5 -     22067 AG-TT-C
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   1590 5 -     60446 AA-TT-C
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         2310 5 -     29318 AA-TT-C
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         1245 5 +     38766 AA-TT-C
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          2204 5 -     80423 AA-TT-C
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            10507 5 -     18050 AA-TT-C
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_1710068                                220 5 +      1555 AA-TT-C
i Alouatta_caraya.k141_1710068                          C 0 C 0
s Alouatta_discolor.k141_811576                             11180 5 -     21359 AA-TT-C
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                 799 5 +      2129 AA-TT-C
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_2177643                           183 5 -      1868 AA-TT-C
i Alouatta_macconnelli.k141_2177643                     C 0 C 0
s Alouatta_nigerrima.k141_3537692                             232 5 +      1660 AA-TT-C
i Alouatta_nigerrima.k141_3537692                       C 0 C 0
s Alouatta_palliata.k141_2764429                              149 5 -      1480 AA-TT-C
i Alouatta_palliata.k141_2764429                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            4225 5 -      4927 AA-TT-C
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_1531728                             364 5 -      1692 AA-TT-C
i Alouatta_seniculus.k141_1531728                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3520357 5 +   4113121 AA-TT-T
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      390553 5 -    631301 AA-TT-C
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            30938 5 +     33004 AA-TT-T
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 62859 5 +     78111 AA-TT-C
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            5801 5 +     22701 AA-TT-C
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5749758 5 +   9889416 AA-TT-C
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             6347 5 -    104377 AA-TT-C
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               6349 5 +     23246 AA-TT-C
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     3915 5 +      5067 AA-TT-C
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        1278 5 +      9265 AA-TT-C
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 8958 5 -     29036 AA-TT-C
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9539618 5 +  39197703 AA-TT-C
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             60889 5 +     85812 AA-TT-C
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                11902 5 +     89302 AA-TT-C
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             16405 5 -     58268 AA-TT-C
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             64397 5 +    119057 AA-TT-C
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               6368 5 -     25888 AA-TT-C
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 7013 5 -     16375 AA-TT-C
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                                632 5 +      6337 AA-TT-C
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26380427 5 +  51448160 AA-TT-C
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        5599 5 -     13118 AA-TT-C
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   43427 5 -     72089 AA-CT-T
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6560090 5 +   6870073 aa-tt-T
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138140199 5 - 161108492 aa-tt-T
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     572740 5 -    998990 aa-tt-T
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136295932 5 - 158972876 aa-tt-T
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1233011 5 -   1914593 aa-tt-t
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               114255 5 -    171031 AA-TT-C
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 13284 5 +    125063 AA-TT-C
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                15327 5 -    216513 AA-TT-C
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        7870 5 -    134917 AA-TT-C
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3219795 5 -   8989139 AA-CT-C
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           397496 5 -  15254737 AA-CT-C
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2973232 5 +   6889770 AA-CT-C
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11519704 5 +  39901454 AT-TC-C
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   14729 5 +     87036 AT-TC-C
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11266371 5 -  35597290 aT-TC-C
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11088905 5 +  39895921 aT-TC-C
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16455920 5 -  44759192 aT-TC-C
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21325433 5 + 157394656 AA-TT-T
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135706661 5 - 157403528 AA-TT-T
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          309300 5 +    345090 AA-TT-C
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               59749 5 +     67245 AA-TT-C
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   31356 5 +     33760 AA-TT-C
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   159117 5 -    276539 AA-TT-C
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15786828 5 -  24422027 AA-TT-C
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15798764 5 -  24440124 AA-TT-C
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       176955 5 +    436027 AA-TT-C
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18891101 5 -  29618158 AA-TT-C
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 8645 5 -     26817 AA-TT-C
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                12888 5 +     25043 AA-TT-C
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         8328 5 +     21754 AA-TT-C
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4364109 5 +   7569818 AA-TC-C
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         3866 5 -      9338 AA-TC-C
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6555536 5 +   6739814 AA-TT-C
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      27013 5 +     60454 AA-TT-C
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          2219 5 -     21101 AA-TT-C
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         59528 5 -    107033 AA-TT-C
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        2418 5 -     17608 AA-TT-C
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          29914 5 +     30494 AA-TT-C
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          58759 5 -     59240 AA-TT-C
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          2460 5 +     16677 AA-TT-C
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           24619 5 +     35983 AA-TT-C
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11991145 5 +  12117833 AA-TT-C
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46477905 5 +  46592721 AA-TT-C
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      41456 5 -     45581 AA-TT-C
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       2461 5 +     35577 AA-TT-C
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        2237 5 -     25661 AA-TT-C
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        2216 5 -     17744 AA-TT-C
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        21831 5 +     37128 AA-TT-C
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           2989 5 -      6963 AA-TT-C
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           59296 5 -     68416 AA-TT-C
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            8341 5 +     13308 AA-TT-C
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             5912 5 -     18223 AA-TT-C
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             22932 5 +     25473 AA-TT-C
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           41970 5 +     57117 AA-TT-C
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          46649 5 +     54541 AA-TT-C
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15961971 5 +  43084221 AA-TT-C
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         71456 5 +    196370 AA-TT-C
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          15636 5 +     40510 AA-TT-C
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15139351 5 -  15256731 AA-TT-C
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      34432 5 -     53260 AA-TT-C
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101144992 5 + 101219884 AA-TT-C
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                16694 5 -     21363 AA-TT-C
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           761997 5 +    964067 AA-TT-C
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10886761 5 +  10971483 AA-TT-C
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147664926 5 + 156195979 AA-TT-C
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            16911 5 +     23629 AA-TT-C
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60613823 5 +  78930452 AA-TT-T
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_22679         39933 4 -     40477 aa-ta--
i Craseonycteris_thonglongyai.CraTho_scaffold_22679     C 0 N 0
s Cricetomys_gambianus.CriGam_scaffold_949                 278806 5 -    399297 AA-TT-C
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53029467 5 +  72327488 AA-CT-C
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            52254 5 -     70449 AT-TT-C
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  208453 5 -    956709 AA-TT-C
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                18006 5 +     26546 AA-GT-C
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             59095 5 -    236241 AA-TT-C
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          183874 5 -   6883506 AA-TT-C
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16845148 5 +  31942871 AA-TT-C
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80037051 5 -  96802777 AA-TT-C
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18699025 5 -  18957592 AA-TT-G
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 322758 5 +    993696 AA-TC-C
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   3412 5 +    151128 AA-TC-C
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   157235 5 +    228994 AA-CT-C
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3656546 3 +   4240102 ---GC-T
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 28187 5 +     28912 AT-GC-T
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                36324 4 -     73477 AA-TG--
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Eidolon_helvum.KE772537.1                                 12488 5 +     24177 AA-TT-A
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1491707 6 +   1727528 AAGTT-T
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        240020 5 -    369425 AA-TT-T
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           7127 5 -      7838 AA-TT-T
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85872428 5 +  99434291 AT-TT-C
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4704397 5 +   6522550 AA-TC-C
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5853208 5 -   7175178 AA-TT-C
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13351713 5 +  41866177 AA-TT-C
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          13202 5 +     92910 AA-TT-C
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11534488 5 +  16010500 AG-TT-C
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48774119 5 -  48907691 AA-TT-C
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          315269 5 +    330699 AA-TT-C
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             61720 5 +     89355 AA-TT-C
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              5348 5 +     13586 AA-TT-C
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               5279 5 -      6809 AA-TT-C
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            11756 5 +     36558 AA-TT-C
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             8077 5 +     60246 AA-TT-C
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                11553 5 +    109717 AA-TT-C
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               15939 5 +     16540 AA-TT-C
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                16214 5 +     27497 AA-TT-G
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           18671 5 +     26808 AA-TT-C
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                33409 5 +     46535 AA-TT-C
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              16133 5 -     29447 AA-TT-C
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129893177 5 - 159252932 AT-TT-C
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129280269 5 - 158578461 AT-TT-C
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 21409 5 +     52776 AT-TT-C
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Galago_moholi.ctg555                                     211172 5 -    847004 AA-TT-C
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           13546 5 -     43889 AA-TT-C
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          10620 5 +     27357 AA-TT-C
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               156526 5 +    324696 AA-CT-C
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    181502 5 -    189561 aa-at-t
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 1 C 0
s Glis_glis.GliGli_scaffold_79770                           13309 5 -     18683 GA-TT-C
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               5597 5 -     14630 AA-TT-C
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119652697 5 - 195582420 AA-TT-C
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   77838 5 +    118900 GA-TT-C
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         2124 5 +     10286 AA-TT-C
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                              601 5 -     11661 AA-TT-C
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             5930 5 +     56096 AA-TT-C
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        29181 5 -     42470 AA-TT-C
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        45804 5 -     54384 AA-TT-C
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              17460 5 +     53719 AT-TT-C
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                27717 5 -     91191 AA-TT-T
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2551328 5 +  31725842 AA-TT-A
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               61074 5 +     73687 AA-TT-G
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              147355 5 +    277961 AA-TT-C
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      278622 5 -    477199 AA-TT-T
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              7768 5 -      9143 AA-TT-T
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      5003 5 -   7690867 AA-TT-C
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 17529 5 -     67322 AT-TT-C
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19239 5 -    119109 AA-TA-T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_164775                              2059 5 +      2073 AA-TT-C
i Hylobates_abbotti.k141_164775                         C 0 C 0
s Hylobates_agilis.k141_1878600                               321 5 -      1230 AA-TT-C
i Hylobates_agilis.k141_1878600                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14624974 5 -  25970782 AA-TT-C
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            2230 5 -      2977 AA-TT-C
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             34133 5 -     60944 AA-TT-C
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     6394 5 +     22540 GA-TT-C
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7126088 5 +  13083262 AA-TT-T
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_5141390                                    646 5 -      3181 AG-TT-C
i Indri_indri.k141_5141390                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               9256 5 +     17520 AA-TT-C
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8566130 5 +  11848649 AG-TT-C
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               23868 5 +     37189 AA-TT-C
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          50487 5 -    147782 AA-TT-C
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   114669 5 -    115756 AA-TT-C
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258407485 5 - 285822530 AA-TT-C
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        24232 5 +     39228 AA-TT-C
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            53616 5 +     63517 AA-TT-C
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        78880 5 +    116806 AA-TT-C
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     31871 5 -     33031 AA-TT-C
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3086221 5 -   3498232 AT-TT-C
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    13495 5 +     22452 AA-TT-C
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            136212 5 +   3060487 AA-TT-C
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19248630 5 +  19376315 AA-TT-C
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           10921 5 +     84689 AA-TG-G
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3778670 5 +   6799190 AA-TG-C
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20594455 5 -  62548349 AA-TT-C
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11088361 5 +  39895028 aT-TC-C
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             20365 5 +     74745 AA-TT-C
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12706822 5 +  12821369 AA-TT-C
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                2464 5 -      3136 AA-TT-C
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           47282 5 +     63263 AA-TT-C
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                 1987 5 -      2568 AA-TT-C
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 2572 5 -      7381 AA-TT-C
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  45789 5 -     79256 AA-TT-C
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196035896 5 + 196197964 AA-TT-C
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11446066 5 +  11645122 AA-TT-C
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   4736 5 -     46448 AA-TT-C
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                2410 5 -     13212 AA-TT-C
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 16089 5 -     55006 AA-TT-C
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43841205 5 +  43892939 AA-TT-C
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               17375 5 -     24607 AA-TT-C
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               4741 5 -     27140 AA-TT-C
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43437790 5 -  43563597 AA-TT-C
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4450610 5 -   4543643 AA-TT-C
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            146294 5 +    252755 AA-TT-T
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             36437 5 +     58827 AA-TT-T
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36873912 5 +  64221397 AA-TT-T
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       64665 4 -    234502 AA-TT--
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 I 1
s Mellivora_capensis.MelCap_flattened_line_15433             1240 5 -     87323 AT-TT-C
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               12966 5 +     15977 AA-TT-C
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1047176 5 -  26018355 AA-CG-C
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_227248                    544 5 -      1377 AA-TT-C
i Mesoplodon_bidens.MesBid_scaffold_227248              C 0 C 0
s Microcebus_murinus.CM007691.1                          16510506 5 +  47401472 AA-TT-A
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               22934 5 -     32043 AA-TT-C
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22820316 5 -  98408828 AA-TT-C
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         2339 5 +     29742 AA-TT-C
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        11737 5 -    104932 AT-TT-C
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     5895 5 +      8497 AA-TT-A
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 146641 5 +    154973 AA-TT-C
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                161457 5 +    265003 AA-TT-C
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  1732 5 -     19904 AA-TT-T
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  145155 5 -    168139 AT-TT-C
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          19767 5 -    100666 AA-TT-C
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70766809 5 +  92629107 AA-TT-T
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75489869 5 +  98207768 GA-TT-T
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67556102 5 +  89017189 AA-TT-C
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74331045 5 +  97876770 GA-TT-T
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             12065 5 +     98495 GA-TT-C
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4424609 5 -  28371801 AT-TT-C
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myotis_brandtii.KE161952.1                               968078 5 +   8389877 AA-TT-C
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5019751 5 +   6462685 AA-TT-C
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3465660 5 -   3747815 AA-TT-C
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        10870 5 +     66751 AA-TT-C
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             5263 5 -      8794 AA-TT-C
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            118916 5 +    362372 GA-TT-C
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               8846 5 +     48152 AA-TT-C
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4485128 5 -  14209539 CT-TT-C
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3951253 5 -   4490290 AA-TT-C
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  49970 1 +     94413 A------
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_220265                             741 5 +      1763 AA-TT-C
i Nomascus_annamensis.k141_220265                       I 92 I 194
s Nomascus_concolor.k141_226614                              1532 5 -      5092 CA-TT-C
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_39679                              503 5 -     17937 AA-TT-C
i Nomascus_gabriellae.k141_39679                        C 0 C 0
s Nomascus_siki_b.tarseq_80                             25250 5 -  18771707 AA-TT-C
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  2953 5 +      4512 AA-TT-C
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                31162 5 +   3668941 aT-TC-C
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65567365 5 -  95554990 TA-TT-C
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            4091 5 +      6470 TA-TT-C
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65669700 5 +  89412551 TA-TT-C
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4996243 5 -  23139505 AA-TT-C
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Odobenus_rosmarus.KB229369.1                             679794 5 -   3126709 AT-TT-C
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1079938 5 +   1425656 AA-TT-C
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         37230 5 +     78940 at-at-c
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  125570 5 +    145789 AA-TT-C
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  37356 5 +     62360 AA-TT-C
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7224938 5 -   7562323 AA-TT-C
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              57748 4 -     66828 AA-TT--
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141876529 5 + 163896628 AA-TT-C
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      308445 5 -    505867 aT-TC-C
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                         990 5 -     53940 AG-TT-C
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18008970 5 -  38779656 aa-tt-c
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134077508 5 - 275406953 aa-tt-t
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      78723 5 +    140051 AA-TT-T
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127574963 5 - 205426864 AA-TT-C
i Pan_paniscus.CM003386.1                               C 0 I 35
s Pan_troglodytes.CM009241.2                            120152117 5 - 196562556 AA-TT-C
i Pan_troglodytes.CM009241.2                            C 0 I 4
s Panthera_onca.PanOnc_flattened_line_1615                  34570 5 +    295523 AT-TT-C
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3638304 5 +  18214204 AT-TT-C
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5027979 5 -   6340057 AT-TT-C
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1066358 5 -   1292953 aa-tt-T
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188156577 5 - 188283584 AA-TT-C
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             4894 5 +      5367 AA-TT-C
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47513962 5 +  47705337 AA-TT-C
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 67938 5 -    104429 AA-TT-C
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    6474 5 +     14967 AA-TT-C
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 2333 5 -      7628 AA-TT-C
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    116032 5 -    135482 AT-TT-C
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           5681 5 -     23713 AA-TT-C
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            24994 5 -     27972 AA-TT-C
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      44827 5 -     45160 AT-GT-C
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4950607 5 -   8017169 AA-TT-C
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    12680 5 -     36578 AG-TT-C
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            121543 5 -    122454 AA-TT-C
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1987485                           2360 5 -      5908 AA-TT-C
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       2984 5 -     17985 AA-TT-C
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            2351 5 +      7694 AA-TT-C
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26740829 5 +  26888534 AA-TT-C
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            97695 5 +    112873 AA-TT-C
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             44093 5 -     61926 AA-TT-C
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        25478 5 +     78826 AA-TT-C
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              9525 5 -     15800 AA-TT-C
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        12724 5 -     16101 AA-TT-C
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          5952 5 +      9673 AA-TT-C
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13474952 5 -  19735023 AA-TT-C
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           13855 5 -     31692 AA-TT-C
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           5629 5 +     21690 AA-TT-C
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       23195 5 +     44506 AA-TT-C
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        23407 5 +     67491 AA-TT-C
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      13647 5 -     98129 AA-TT-C
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     23247 5 +    147771 AA-TT-C
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        23504 5 -     23762 AA-TT-C
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          3966 5 -     55515 AA-TT-C
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         23320 5 +    152463 AA-TT-C
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       1037 5 -    119457 AA-TT-C
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         13043 5 +    134592 AA-TT-C
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          23630 5 -     75465 AA-TT-C
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              187483 5 -    373494 AA-TT-C
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19808131 5 +  19899266 AA-TT-C
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               6090 5 -     15069 AA-TT-C
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              6220 5 +     14865 AA-TT-C
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                2184 5 -      9567 AA-TT-C
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6848862 5 +  12164890 AA-TT-C
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     17171 5 -     30946 AA-TT-C
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         3928 5 +     11805 AA-TT-C
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           43271 5 +     52369 AA-TT-C
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         35658 5 -     44753 AA-TT-C
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            17582 5 +     27322 AA-TT-C
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       17218 5 -     53241 AA-TT-C
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         39482 5 -     48185 AA-TT-C
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           34514 5 +     77221 AA-TT-C
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            4102 5 -     27784 AA-TT-C
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        246919 5 -    344369 AT-TT-C
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13246219 5 -  17261082 AA-TT-A
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             604170 5 -   3946241 AA-TT-A
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131534557 5 - 161321710 AT-TT-C
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             30211 5 +     56732 AA-TT-C
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6806699 5 +   6970761 AA-TT-C
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             6090 5 +     18040 AA-TT-C
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                16017 5 +     68503 AA-TT-C
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13915811 5 +  90463843 AG-TT-C
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1788046 5 +   2252614 AA-TT-T
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                             502 5 -     17045 AA-TT-C
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206377979 5 - 206558726 AA-TT-C
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44856893 5 -  45163003 AA-TT-C
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                19553 5 +    109198 AA-CT-A
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       8184 5 +     12214 AA-TT-T
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15673057 5 -  43202129 AA-TT-C
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        4970 5 +     34089 AA-TT-C
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              4912 5 -     60842 AA-TT-C
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              5005 5 +     67014 AA-TT-C
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              4983 5 +     60816 AA-TT-C
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 4920 5 -     76454 AA-TT-C
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17341645 5 -  30362882 AA-TT-C
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         21006 5 -     62485 AA-TT-C
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   32524 5 -    114521 AA-TT-C
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        3703 5 +     15331 AA-TT-C
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       9096 5 +     20762 AA-TT-C
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         119099 5 +    130994 AA-TT-C
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           37885 5 +     46263 AA-TT-C
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     31005 5 +     42640 AA-TT-C
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        14045 5 +     30600 AA-TT-C
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  100555 5 -    120886 AA-TT-T
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            19106 6 +    739146 AA-TTTT
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17765592 5 -  27805282 AA-TT-C
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2240004 5 +   2842873 AA-TT-T
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             235039 5 -    276980 AT-TT-A
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            27815 5 +     62062 AT-TT-C
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189272095 5 + 218635234 AA-TT-C
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        15235 5 -  13920577 AA-TT-C
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                 481 5 +     20549 AA-TT-C
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               14927 5 +     45698 AA-TT-C
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      807348 5 +   1148477 AA-TT-C
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  58059 5 +     99546 AA-TT-C
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               26774 5 +     42269 AA-TT-C
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               60090 5 +     65473 AA-TT-C
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194008099 5 - 194193292 AA-TT-C
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  5747 5 +      6782 AA-TT-C
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  136094 5 -    259118 AA-TT-C
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        27201 5 +     38948 AA-TT-C
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   20933 5 -     32910 AA-TT-C
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      2319 5 -     12939 AA-TT-C
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       2255 5 -     14244 AA-TT-C
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           43654 5 -     54611 AA-TT-C
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        1457 5 -     11566 AA-TT-C
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     3634 5 -     15592 AA-TT-C
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          2290 5 +     14371 AA-TT-C
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                    571 5 +     12481 AA-TT-C
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                         447 5 -     24393 AA-TT-C
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       5693 5 -     28054 AA-TT-C
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44660493 5 -  44834318 AA-TT-C
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       2801 5 +     13828 AA-TT-C
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   5410 5 +     90398 AA-TT-C
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16085128 5 +  31416278 AA-TT-C
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2793146 5 -   3938065 AA-CC-C
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    5346 5 +     13056 AA-CC-C
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69313654 5 -  96451834 AA-TT-C
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   1556 5 +     10241 AA-TT-A
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6515048 5 +  28682327 AT-TT-C
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  5559 5 -     20643 AA-TT-C
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             25100 5 -     33872 AA-TT-C
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1524900 5 -   2331223 AA-CT-C
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                138542 5 -    281493 AT-TC-C
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       127118 5 -    134049 GA-TT-C
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        214521 5 -    227762 AT-TT-C
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     15443 5 -     20485 GG-GT-C
i Zapus_hudsonius.ZapHud_scaffold_64392                 I 217 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           7153 5 -      8775 AA-TT-C
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                701732 90 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             38964 0 -     47444 C
e Miniopterus_schreibersii.MinSch_scaffold_24116            34575 0 +     45743 C
e Miniopterus_natalensis.LDJU01000022.1                   8209921 0 +  10048721 C
e Microgale_talazaci.MicTal_scaffold_34660                  34700 0 -     48017 C
e Elephantulus_edwardii.JH947210.1                        7816071 13 +  15467074 I
e Echinops_telfairi.JH980316.1                           22998698 0 -  44670279 C
e Crocidura_indochinensis.CroInd_scaffold_848148              199 0 +      1327 C
e Hylobates_klossii.k141_285563                               343 193 +      1026 I
e Octodon_degus.JH651621.1                                3685767 0 +  10294119 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     90228 0 -    117718 C
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 30936 0 -     67205 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               12085 8 +    209709 T-----GTAGCTG
s Acinonyx_jubatus.LLWD01000356.1                         2034223 4 +   3721120 T-----GTA----
i Acinonyx_jubatus.LLWD01000356.1                       C 0 I 4
s Acomys_cahirinus.AcoCah_scaffold_1625                    112838 4 -    189883 T-----GTA----
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 I 4
s Ailuropoda_melanoleuca.LNAT01000321.1                  10657561 4 +  23371972 T-----GCA----
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 I 4
s Ailurus_fulgens.LNAC01000003.1                          7094908 4 -  16596857 T-----GTA----
i Ailurus_fulgens.LNAC01000003.1                        C 0 I 4
s Allactaga_bullata.AllBul_scaffold_70162                   17123 4 -     22067 T-----GTA----
i Allactaga_bullata.AllBul_scaffold_70162               C 0 I 4
s Allenopithecus_nigroviridis.k141_2469532                   1595 4 -     60446 T-----GTA----
i Allenopithecus_nigroviridis.k141_2469532              C 0 I 4
s Allochrocebus_lhoesti.k141_3566948                         2315 4 -     29318 T-----GTA----
i Allochrocebus_lhoesti.k141_3566948                    C 0 I 4
s Allochrocebus_preussi.k141_1108977                         1250 4 +     38766 T-----GTA----
i Allochrocebus_preussi.k141_1108977                    C 0 I 4
s Allochrocebus_solatus.k141_371672                          2209 4 -     80423 T-----GTA----
i Allochrocebus_solatus.k141_371672                     C 0 I 4
s Alouatta_belzebul.k141_1818029                            10512 4 -     18050 T-----GTA----
i Alouatta_belzebul.k141_1818029                        C 0 I 4
s Alouatta_caraya.k141_1710068                                225 4 +      1555 T-----GTA----
i Alouatta_caraya.k141_1710068                          C 0 I 4
s Alouatta_discolor.k141_811576                             11185 4 -     21359 T-----GTA----
i Alouatta_discolor.k141_811576                         C 0 I 4
s Alouatta_juara.k141_1244470                                 804 4 +      2129 T-----GTA----
i Alouatta_juara.k141_1244470                           C 0 I 4
s Alouatta_macconnelli.k141_2177643                           188 4 -      1868 T-----GTA----
i Alouatta_macconnelli.k141_2177643                     C 0 I 4
s Alouatta_nigerrima.k141_3537692                             237 4 +      1660 T-----GTA----
i Alouatta_nigerrima.k141_3537692                       C 0 I 4
s Alouatta_palliata.k141_2764429                              154 4 -      1480 T-----GTA----
i Alouatta_palliata.k141_2764429                        C 0 I 4
s Alouatta_puruensis.k141_1284840                            4230 4 -      4927 T-----GTA----
i Alouatta_puruensis.k141_1284840                       C 0 I 4
s Alouatta_seniculus.k141_1531728                             369 4 -      1692 T-----GTA----
i Alouatta_seniculus.k141_1531728                       C 0 I 4
s Ammotragus_lervia.NIVO01013474.1                        3520362 4 +   4113121 T-----GTA----
i Ammotragus_lervia.NIVO01013474.1                      C 0 I 4
s Anoura_caudifer.AnoCau_scaffold_422                      390558 9 -    631301 TTGTAATCA----
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 I 4
s Antilocapra_americana.AntAmePen_scaffold_42841            30943 4 +     33004 T-----GTA----
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 I 4
s Aotus_azarae.k141_3170768                                 62864 4 +     78111 T-----GTA----
i Aotus_azarae.k141_3170768                             C 0 I 4
s Aotus_griseimembra.k141_3275623                            5806 4 +     22701 T-----GTA----
i Aotus_griseimembra.k141_3275623                       C 0 I 4
s Aotus_nancymaae.KZ196176.1                              5749763 4 +   9889416 T-----GTA----
i Aotus_nancymaae.KZ196176.1                            C 0 I 4
s Aotus_trivirgatus.k141_1740727                             6352 4 -    104377 T-----GTA----
i Aotus_trivirgatus.k141_1740727                        C 0 I 4
s Aotus_vociferans.k141_718647                               6354 4 +     23246 T-----GTA----
i Aotus_vociferans.k141_718647                          C 0 I 4
s Aplodontia_rufa.AprRuf_scaffold_156013                     3920 4 +      5067 T-----GTA----
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 I 4
s Arctocebus_calabarensis.k141_587554                        1283 4 +      9265 T-----GTA----
i Arctocebus_calabarensis.k141_587554                   C 0 I 4
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 8963 9 -     29036 TTATAATTA----
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 I 4
s Ateles_geoffroyi_b.tarseq_2582                             9539623 4 +  39197703 T-----GTA----
i Ateles_geoffroyi_b.tarseq_2582                           C 0 I 4
s Ateles_belzebuth.k141_1348307                             60894 4 +     85812 T-----GTA----
i Ateles_belzebuth.k141_1348307                         C 0 I 4
s Ateles_chamek.k141_1072810                                11907 4 +     89302 T-----GTA----
i Ateles_chamek.k141_1072810                            C 0 I 4
s Ateles_geoffroyi_a.k141_1300742                             16410 4 -     58268 T-----GTA----
i Ateles_geoffroyi_a.k141_1300742                         C 0 I 4
s Ateles_marginatus.k141_899112                             64402 4 +    119057 T-----GTA----
i Ateles_marginatus.k141_899112                         C 0 I 4
s Ateles_paniscus.k141_1631200                               6373 4 -     25888 T-----GTA----
i Ateles_paniscus.k141_1631200                          C 0 I 4
s Avahi_laniger.k141_2840928                                 7018 4 -     16375 T-----GTA----
i Avahi_laniger.k141_2840928                            C 0 I 4
s Avahi_peyrierasi.k141_798820                                637 4 +      6337 T-----GTA----
i Avahi_peyrierasi.k141_798820                          C 0 I 4
s Balaenoptera_acutorostrata.KI537095.1                  26380432 4 +  51448160 T-----GCA----
i Balaenoptera_acutorostrata.KI537095.1                 C 0 I 4
s Balaenoptera_bonaerensis.DF502048.1                        5604 4 -     13118 T-----GCA----
i Balaenoptera_bonaerensis.DF502048.1                   C 0 I 4
s Beatragus_hunteri.BeaHun_scaffold_21644                   43432 4 -     72089 T-----GTA----
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 I 4
s Bison_bison.KN264915.1                                  6560095 4 +   6870073 T-----GTA----
i Bison_bison.KN264915.1                                C 0 I 4
s Bos_indicus.CM003021.1                                138140204 4 - 161108492 T-----GTA----
i Bos_indicus.CM003021.1                                C 0 I 4
s Bos_mutus.JH883513.1                                     572745 4 -    998990 T-----GTA----
i Bos_mutus.JH883513.1                                  C 0 I 4
s Bos_taurus.CM000177.6                                 136295937 4 - 158972876 T-----GTA----
i Bos_taurus.CM000177.6                                 C 0 I 4
s Bubalus_bubalis.KI419065.1                              1233016 4 -   1914593 t-----gta----
i Bubalus_bubalis.KI419065.1                            C 0 I 4
s Cacajao_ayresi.k141_724503                               114260 4 -    171031 T-----GTA----
i Cacajao_ayresi.k141_724503                            C 0 I 4
s Cacajao_calvus.k141_96166                                 13289 4 +    125063 T-----GTA----
i Cacajao_calvus.k141_96166                             C 0 I 4
s Cacajao_hosomi.k141_303789                                15332 4 -    216513 T-----GTA----
i Cacajao_hosomi.k141_303789                            C 0 I 4
s Cacajao_melanocephalus.k141_1160263                        7875 4 -    134917 T-----GTA----
i Cacajao_melanocephalus.k141_1160263                   C 0 I 4
s Camelus_bactrianus.KN276303.1                           3219800 4 -   8989139 T-----GCA----
i Camelus_bactrianus.KN276303.1                         C 0 I 4
s Camelus_dromedarius.KN271192.1                           397501 4 -  15254737 T-----GCA----
i Camelus_dromedarius.KN271192.1                        C 0 I 4
s Camelus_ferus.KB016973.1                                2973237 4 +   6889770 T-----GCA----
i Camelus_ferus.KB016973.1                              C 0 I 4
s CanFam4.chr31                                          11519709 4 +  39901454 T-----GTA----
i CanFam4.chr31                                         C 0 I 4
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   14734 4 +     87036 T-----GTA----
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 I 4
s Canis_lupus_dingo.QKWQ01001993.1                       11266376 4 -  35597290 T-----GTA----
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 I 4
s Canis_lupus_familiaris.chr31                           11088910 4 +  39895921 T-----GTA----
i Canis_lupus_familiaris.chr31                          C 0 I 4
s Canis_lupus_orion.HG994411.1                           16455925 4 -  44759192 T-----GTA----
i Canis_lupus_orion.HG994411.1                          C 0 I 4
s Capra_aegagrus.CM003214.1                              21325438 4 + 157394656 T-----GTA----
i Capra_aegagrus.CM003214.1                             C 0 I 4
s Capra_hircus.CM004562.1                               135706666 4 - 157403528 T-----GTA----
i Capra_hircus.CM004562.1                               C 0 I 4
s Carlito_syrichta.NW_007248099.1                          309305 4 +    345090 T-----GCT----
i Carlito_syrichta.NW_007248099.1                       C 0 I 4
s Carollia_perspicillata.CarPer_scaffold_4436               59754 9 +     67245 TTACAATTA----
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 I 4
s Castor_canadensis.CasCan_scaffold_47037                   31361 4 +     33760 T-----GTA----
i Castor_canadensis.CasCan_scaffold_47037               C 0 I 4
s Catagonus_wagneri.CatWag_scaffold_1305                   159122 4 -    276539 T-----ATA----
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 I 4
s Cavia_aperea.AVPZ01000278.1                            15786833 4 -  24422027 T-----TCA----
i Cavia_aperea.AVPZ01000278.1                           C 0 I 4
s Cavia_porcellus.DS562889.1                             15798769 4 -  24440124 T-----CCA----
i Cavia_porcellus.DS562889.1                            C 0 I 4
s Cavia_tschudii.CavTsc_scaffold_488                       176960 4 +    436027 T-----CCA----
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 I 4
s Cebus_albifrons.Contig22                               18891106 4 -  29618158 T-----GTA----
i Cebus_albifrons.Contig22                              C 0 I 4
s Cebus_olivaceus.k141_93739                                 8650 4 -     26817 T-----GTA----
i Cebus_olivaceus.k141_93739                            C 0 I 4
s Cebus_unicolor.k141_239009                                12893 4 +     25043 T-----GTA----
i Cebus_unicolor.k141_239009                            C 0 I 4
s Cephalopachus_bancanus.k141_702587                         8333 4 +     21754 T-----GCT----
i Cephalopachus_bancanus.k141_702587                    C 0 I 4
s Ceratotherium_simum.JH767818.1                          4364114 4 +   7569818 T-----GTA----
i Ceratotherium_simum.JH767818.1                        C 0 I 4
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         3871 4 -      9338 T-----GTA----
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 I 4
s Cercocebus_atys.KQ010443.1                              6555541 4 +   6739814 T-----GTA----
i Cercocebus_atys.KQ010443.1                            C 0 I 4
s Cercocebus_chrysogaster.k141_2328246                      27018 4 +     60454 T-----GTA----
i Cercocebus_chrysogaster.k141_2328246                  C 0 I 4
s Cercocebus_lunulatus.k141_4634644                          2224 4 -     21101 T-----GTA----
i Cercocebus_lunulatus.k141_4634644                     C 0 I 4
s Cercocebus_torquatus.k141_3969582                         59533 4 -    107033 T-----GTA----
i Cercocebus_torquatus.k141_3969582                     C 0 I 4
s Cercopithecus_ascanius.k141_4123525                        2423 4 -     17608 T-----GTA----
i Cercopithecus_ascanius.k141_4123525                   C 0 I 4
s Cercopithecus_cephus.k141_598190                          29919 4 +     30494 T-----GTA----
i Cercopithecus_cephus.k141_598190                      C 0 I 4
s Cercopithecus_diana.k141_2980617                          58764 4 -     59240 T-----GTA----
i Cercopithecus_diana.k141_2980617                      C 0 I 4
s Cercopithecus_hamlyni.k141_129805                          2465 4 +     16677 T-----GTA----
i Cercopithecus_hamlyni.k141_129805                     C 0 I 4
s Cercopithecus_lowei.k141_623764                           24624 4 +     35983 T-----GTA----
i Cercopithecus_lowei.k141_623764                       C 0 I 4
s Cercopithecus_albogularis.ctg51                              11991150 4 +  12117833 T-----GTA----
i Cercopithecus_albogularis.ctg51                             C 0 I 4
s Cercopithecus_mona.ctg12                               46477910 4 +  46592721 T-----GTA----
i Cercopithecus_mona.ctg12                              C 0 I 4
s Cercopithecus_neglectus.k141_2078027                      41461 4 -     45581 T-----GTA----
i Cercopithecus_neglectus.k141_2078027                  C 0 I 4
s Cercopithecus_nictitans.k141_1129315                       2466 4 +     35577 T-----GTA----
i Cercopithecus_nictitans.k141_1129315                  C 0 I 4
s Cercopithecus_petaurista.k141_64532                        2242 4 -     25661 T-----GTA----
i Cercopithecus_petaurista.k141_64532                   C 0 I 4
s Cercopithecus_pogonias.k141_3109732                        2221 4 -     17744 T-----GTA----
i Cercopithecus_pogonias.k141_3109732                   C 0 I 4
s Cercopithecus_roloway.k141_2263608                        21836 4 +     37128 T-----GTA----
i Cercopithecus_roloway.k141_2263608                    C 0 I 4
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           2994 4 -      6963 T-----GTA----
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 I 4
s Cheirogaleus_major.k141_1157592                           59301 4 -     68416 T-----ATA----
i Cheirogaleus_major.k141_1157592                       C 0 I 4
s Cheirogaleus_medius.k141_133808                            8346 4 +     13308 T-----GTA----
i Cheirogaleus_medius.k141_133808                       C 0 I 4
s Cheracebus_lucifer.k141_619653                             5917 4 -     18223 T-----ATA----
i Cheracebus_lucifer.k141_619653                        C 0 I 4
s Cheracebus_lugens.k141_203936                             22937 4 +     25473 T-----GTA----
i Cheracebus_lugens.k141_203936                         C 0 I 4
s Cheracebus_regulus.k141_2128895                           41975 4 +     57117 T-----ATA----
i Cheracebus_regulus.k141_2128895                       C 0 I 4
s Cheracebus_torquatus.k141_315545                          46654 4 +     54541 T-----ATA----
i Cheracebus_torquatus.k141_315545                      C 0 I 4
s Chinchilla_lanigera.JH721867.1                         15961976 4 +  43084221 T-----cca----
i Chinchilla_lanigera.JH721867.1                        C 0 I 4
s Chiropotes_israelita.k141_1189915                         71461 4 +    196370 T-----GTA----
i Chiropotes_israelita.k141_1189915                     C 0 I 4
s Chiropotes_sagulatus.k141_773804                          15641 4 +     40510 T-----GTA----
i Chiropotes_sagulatus.k141_773804                      C 0 I 4
s Chlorocebus_aethiops.ctg22                             15139356 4 -  15256731 T-----GTA----
i Chlorocebus_aethiops.ctg22                            C 0 I 4
s Chlorocebus_pygerythrus.k141_1486215                      34437 4 -     53260 T-----GTA----
i Chlorocebus_pygerythrus.k141_1486215                  C 0 I 4
s Chlorocebus_sabaeus.CM001963.2                        101144997 4 + 101219884 T-----GTA----
i Chlorocebus_sabaeus.CM001963.2                        C 0 I 4
s Choloepus_didactylus.ChoDid_scaffold_36182                16699 4 -     21363 T-----GTA----
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 I 4
s Choloepus_hoffmanni.KN194586.1                           762002 4 +    964067 T-----GTA----
i Choloepus_hoffmanni.KN194586.1                        C 0 I 4
s Colobus_angolensis.KN985967.1                          10886766 4 +  10971483 T-----GTA----
i Colobus_angolensis.KN985967.1                         C 0 I 4
s Colobus_guereza.LG08                                  147664931 4 + 156195979 T-----GTA----
i Colobus_guereza.LG08                                  C 0 I 4
s Colobus_polykomos.k141_1406057                            16916 4 +     23629 T-----GTA----
i Colobus_polykomos.k141_1406057                        C 0 I 4
s Condylura_cristata.JH655880.1                          60613828 4 +  78930452 T-----GTA----
i Condylura_cristata.JH655880.1                         C 0 I 4
s Craseonycteris_thonglongyai.CraTho_scaffold_144252          902 4 -      5782 t-----gta----
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    N 0 I 4
s Cricetomys_gambianus.CriGam_scaffold_949                 278811 4 -    399297 T-----ATA----
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 I 4
s Cricetulus_griseus.LT883672.1                          53029472 4 +  72327488 T-----GTA----
i Cricetulus_griseus.LT883672.1                         C 0 I 4
s Cryptoprocta_ferox.CryFer_flattened_line_19014            52259 4 -     70449 T-----GTA----
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 I 4
s Ctenodactylus_gundi.CteGun_scaffold_447                  208458 4 -    956709 T-----ATA----
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 I 4
s Cuniculus_paca.CunPac_flattened_line_16637                18011 4 +     26546 T-----CCA----
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 I 4
s Dasyprocta_punctata.DasPun_flattened_line_634             59100 4 -    236241 T-----TCA----
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 I 4
s Dasypus_novemcinctus.JH568778.1                          183879 4 -   6883506 T-----GTA----
i Dasypus_novemcinctus.JH568778.1                       C 0 I 4
s Daubentonia_madagascariensis.ctg11                     16845153 4 +  31942871 T-----GTA----
i Daubentonia_madagascariensis.ctg11                    C 0 I 4
s Delphinapterus_leucas.KZ290064.1                       80037056 4 -  96802777 T-----GCA----
i Delphinapterus_leucas.KZ290064.1                      C 0 I 4
s Desmodus_rotundus.KZ672188.1                           18699030 9 -  18957592 TTATAATTA----
i Desmodus_rotundus.KZ672188.1                          C 0 I 4
s Dicerorhinus_sumatrensis.PEKH010003161.1                 322763 4 +    993696 T-----GTA----
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 I 4
s Diceros_bicornis.DicBicMic_scaffold_9545                   3417 4 +    151128 T-----GTA----
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 I 4
s Dinomys_branickii.DinBra_scaffold_1996                   157240 4 +    228994 T-----CCA----
i Dinomys_branickii.DinBra_scaffold_1996                C 0 I 4
s Dipodomys_ordii.KN672545.1                              3656549 4 +   4240102 C-----ATG----
i Dipodomys_ordii.KN672545.1                            C 0 I 4
s Dipodomys_stephensi.DipSte_scaffold_44365                 28192 4 +     28912 C-----ATG----
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 I 4
s Dolichotis_patagonum.DolPat_scaffold_14102                36328 4 -     73477 T-----CCA----
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 I 4
s Echinops_telfairi.JH980316.1                           22998698 1 -  44670279 --------T----
i Echinops_telfairi.JH980316.1                          C 0 I 4
s Eidolon_helvum.KE772537.1                                 12493 4 +     24177 T-----ATA----
i Eidolon_helvum.KE772537.1                             C 0 I 4
s Elaphurus_davidianus.JRFZ01086400.1                     1491713 4 +   1727528 T-----GTA----
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 I 4
s Ellobius_lutescens.LOEQ01003611.1                        240025 4 -    369425 T-----GTA----
i Ellobius_lutescens.LOEQ01003611.1                     C 0 I 1
s Ellobius_talpinus.LOJH01090055.1                           7132 4 -      7838 T-----GTA----
i Ellobius_talpinus.LOJH01090055.1                      C 0 I 4
s Enhydra_lutris.KZ291749.1                              85872433 4 +  99434291 T-----GTA----
i Enhydra_lutris.KZ291749.1                             C 0 I 4
s Eptesicus_fuscus.JH977687.1                             4704402 4 +   6522550 T-----GTA----
i Eptesicus_fuscus.JH977687.1                           C 0 I 4
s Equus_asinus.JREZ01000062.1                             5853213 4 -   7175178 T-----GTA----
i Equus_asinus.JREZ01000062.1                           C 0 I 4
s Equus_caballus.CM000402.2                              13351718 4 +  41866177 T-----GTA----
i Equus_caballus.CM000402.2                             C 0 I 4
s Equus_przewalskii.ATBW01073585.1                          13207 4 +     92910 T-----GTA----
i Equus_przewalskii.ATBW01073585.1                      C 0 I 4
s Erinaceus_europaeus.JH835290.1                         11534493 4 +  16010500 T-----GTA----
i Erinaceus_europaeus.JH835290.1                        C 0 I 11
s Erythrocebus_patas.Contig8                             48774124 4 -  48907691 T-----GTA----
i Erythrocebus_patas.Contig8                            C 0 I 4
s Eschrichtius_robustus.EscRob_flattened_line_685          315274 4 +    330699 T-----GCA----
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 I 4
s Eubalaena_japonica.EubJap_flattened_line_7756             61725 4 +     89355 T-----GCA----
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 I 4
s Eulemur_albifrons.k141_715837                              5353 4 +     13586 T-----GCA----
i Eulemur_albifrons.k141_715837                         C 0 I 4
s Eulemur_collaris.k141_311830                               5284 4 -      6809 T-----GCA----
i Eulemur_collaris.k141_311830                          C 0 I 4
s Eulemur_coronatus.k141_3240342                            11761 4 +     36558 T-----GCA----
i Eulemur_coronatus.k141_3240342                        C 0 I 4
s Eulemur_flavifrons.k141_903901                             8082 4 +     60246 T-----GCA----
i Eulemur_flavifrons.k141_903901                        C 0 I 4
s Eulemur_fulvus.k141_653297                                11558 4 +    109717 T-----GCA----
i Eulemur_fulvus.k141_653297                            C 0 I 4
s Eulemur_macaco.k141_1341545                               15944 4 +     16540 T-----GCA----
i Eulemur_macaco.k141_1341545                           C 0 I 4
s Eulemur_mongoz.k141_825972                                16219 4 +     27497 T-----GCA----
i Eulemur_mongoz.k141_825972                            C 0 I 4
s Eulemur_rubriventer.k141_411740                           18676 4 +     26808 T-----GCA----
i Eulemur_rubriventer.k141_411740                       C 0 I 4
s Eulemur_rufus.k141_1620292                                33414 4 +     46535 T-----GCA----
i Eulemur_rufus.k141_1620292                            C 0 I 4
s Eulemur_sanfordi.k141_186399                              16138 4 -     29447 T-----GCA----
i Eulemur_sanfordi.k141_186399                          C 0 I 4
s Felis_catus.CM001386.2                                129893182 4 - 159252932 T-----GTA----
i Felis_catus.CM001386.2                                C 0 I 4
s Felis_catus_fca126.CM031420.1                         129280274 4 - 158578461 T-----GTA----
i Felis_catus_fca126.CM031420.1                         C 0 I 4
s Felis_nigripes.FelNig_flattened_line_8080                 21414 4 +     52776 T-----GTA----
i Felis_nigripes.FelNig_flattened_line_8080             C 0 I 4
s Galago_moholi.ctg555                                     211177 4 -    847004 T-----GTA----
i Galago_moholi.ctg555                                  C 0 I 4
s Galago_senegalensis.k141_964197                           13551 4 -     43889 T-----GTA----
i Galago_senegalensis.k141_964197                       C 0 I 4
s Galagoides_demidoff.k141_1769638                          10625 4 +     27357 T-----GTA----
i Galagoides_demidoff.k141_1769638                      C 0 I 4
s Galeopterus_variegatus.GalVar_scaffold_354               156531 4 +    324696 T-----GTA----
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 I 4
s Giraffa_tippelskirchi.LVKQ01S012154.1                    181507 4 -    189561 t-----gta----
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 I 4
s Glis_glis.GliGli_scaffold_79770                           13314 3 -     18683 ------ATA----
i Glis_glis.GliGli_scaffold_79770                       C 0 I 4
s Gorilla_beringei.k141_111300                               5602 4 -     14630 T-----GTA----
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119652702 4 - 195582420 T-----GTA----
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   77843 4 +    118900 T-----ATA----
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         2129 4 +     10286 T-----GCA----
i Hapalemur_alaotrensis.k141_1280836                    C 0 I 4
s Hapalemur_gilberti.k141_279011                              606 4 -     11661 T-----GCA----
i Hapalemur_gilberti.k141_279011                        C 0 I 4
s Hapalemur_griseus.k141_1387522                             5935 4 +     56096 T-----GCA----
i Hapalemur_griseus.k141_1387522                        C 0 I 4
s Hapalemur_meridionalis.k141_186231                        29186 4 -     42470 T-----GCA----
i Hapalemur_meridionalis.k141_186231                    C 0 I 4
s Hapalemur_occidentalis.k141_797938                        45809 4 -     54384 T-----GCA----
i Hapalemur_occidentalis.k141_797938                    C 0 I 4
s Helogale_parvula.HelPar_flattened_line_22962              17465 4 +     53719 T-----GTA----
i Helogale_parvula.HelPar_flattened_line_22962          C 0 I 4
s Hemitragus_hylocrius.HemHyl_scaffold_16669                27722 4 -     91191 T-----GTA----
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 I 4
s Heterocephalus_glaber.JH602058.1                        2551333 4 +  31725842 C-----gca----
i Heterocephalus_glaber.JH602058.1                      C 0 I 4
s Heterohyrax_brucei.HetBruBak_scaffold_25354               61079 4 +     73687 T-----GTA----
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 I 11
s Hippopotamus_amphibius.HipAmp_scaffold_1308              147360 4 +    277961 T-----GTA----
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 I 4
s Hipposideros_armiger.JXIK01001085.1                      278627 4 -    477199 G-----GTA----
i Hipposideros_armiger.JXIK01001085.1                   C 0 I 4
s Hipposideros_galeritus.HipGal_scaffold_104691              7773 4 -      9143 G-----GTA----
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 I 4
s Hoolock_leuconedys.ctg79                                      5008 4 -   7690867 T-----GTA----
i Hoolock_leuconedys.ctg79                                 C 0 I 4
s Hyaena_hyaena.HyaHya_flattened_line_20729                 17534 4 -     67322 T-----GTA----
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 I 4
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19244 4 -    119109 T-----CCA----
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 I 4
s Hylobates_abbotti.k141_164775                              2064 4 +      2073 T-----GTA----
i Hylobates_abbotti.k141_164775                         C 0 n 0
s Hylobates_agilis.k141_1878600                               326 4 -      1230 T-----GTA----
i Hylobates_agilis.k141_1878600                         C 0 I 4
s Hylobates_pileatus_b.ContigUN                                 14624979 4 -  25970782 T-----GTA----
i Hylobates_pileatus_b.ContigUN                                C 0 I 4
s Hylobates_muelleri.k141_1389047                            2235 4 -      2977 T-----GTA----
i Hylobates_muelleri.k141_1389047                       C 0 I 4
s Hylobates_pileatus_a.tarseq_592                             34138 4 -     60944 T-----GTA----
i Hylobates_pileatus_a.tarseq_592                         C 0 I 4
s Hystrix_cristata.HysCri_scaffold_50788                     6399 4 +     22540 T-----ATG----
i Hystrix_cristata.HysCri_scaffold_50788                C 0 I 4
s Ictidomys_tridecemlineatus.JH393315.1                   7126093 4 +  13083262 G-----GTA----
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 I 4
s Indri_indri.k141_5141390                                    651 4 -      3181 T-----GTA----
i Indri_indri.k141_5141390                              C 0 I 4
s Inia_geoffrensis.IniGeo_flattened_line_66725               9261 4 +     17520 T-----GCA----
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 I 4
s Jaculus_jaculus.JH725517.1                              8566135 4 +  11848649 T-----GTA----
i Jaculus_jaculus.JH725517.1                            C 0 I 4
s Kogia_breviceps.KogBre_flattened_line_35920               23873 4 +     37189 T-----GCA----
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 I 4
s Lagothrix_lagothricha.k141_12968                          50492 4 -    147782 T-----GTA----
i Lagothrix_lagothricha.k141_12968                      C 0 I 4
s Lasiurus_borealis.LasBor_scaffold_5102                   114674 4 -    115756 T-----GTA----
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 I 4
s Lemur_catta.scaffold_1                                258407490 4 - 285822530 T-----GCA----
i Lemur_catta.scaffold_1                                C 0 I 4
s Lepilemur_ankaranensis.k141_884009                        24237 4 +     39228 T-----GTA----
i Lepilemur_ankaranensis.k141_884009                    C 0 I 4
s Lepilemur_dorsalis.k141_134267                            53621 4 +     63517 T-----GTA----
i Lepilemur_dorsalis.k141_134267                        C 0 I 4
s Lepilemur_ruficaudatus.k141_617879                        78885 4 +    116806 T-----GTA----
i Lepilemur_ruficaudatus.k141_617879                    C 0 I 4
s Lepilemur_septentrionalis.k141_578524                     31876 4 -     33031 T-----GTA----
i Lepilemur_septentrionalis.k141_578524                 C 0 I 4
s Leptonychotes_weddellii.KB714749.1                      3086226 4 -   3498232 T-----GCA----
i Leptonychotes_weddellii.KB714749.1                    C 0 I 4
s Lepus_americanus.LepAme_scaffold_62849                    13500 4 +     22452 T-----GTA----
i Lepus_americanus.LepAme_scaffold_62849                C 0 I 4
s Lipotes_vexillifer.KE558548.1                            136217 4 +   3060487 T-----GCA----
i Lipotes_vexillifer.KE558548.1                         C 0 I 4
s Lophocebus_aterrimus.ctg55                             19248635 4 +  19376315 T-----GTA----
i Lophocebus_aterrimus.ctg55                            C 0 I 4
s Loris_lydekkerianus.k141_550999                           10926 4 +     84689 T-----GGA----
i Loris_lydekkerianus.k141_550999                       C 0 I 4
s Loris_tardigradus.ctg97                                 3778675 4 +   6799190 T-----GGA----
i Loris_tardigradus.ctg97                               C 0 I 4
s Loxodonta_africana.GL010040.1                          20594460 4 -  62548349 T-----GTA----
i Loxodonta_africana.GL010040.1                         C 0 I 4
s Lycaon_pictus.CM007556.1                               11088366 4 +  39895028 T-----GTA----
i Lycaon_pictus.CM007556.1                              C 0 I 4
s Macaca_arctoides.k141_2201161                             20370 4 +     74745 T-----GTA----
i Macaca_arctoides.k141_2201161                         C 0 I 4
s Macaca_assamensis.Contig65                             12706827 4 +  12821369 T-----GTA----
i Macaca_assamensis.Contig65                            C 0 I 4
s Macaca_cyclopis.k119_893486                                2469 4 -      3136 T-----GTA----
i Macaca_cyclopis.k119_893486                           C 0 I 4
s Macaca_fascicularis.k141_155037                           47287 4 +     63263 T-----GTA----
i Macaca_fascicularis.k141_155037                       C 0 I 4
s Macaca_fuscata.k119_599327                                 1992 4 -      2568 T-----GTA----
i Macaca_fuscata.k119_599327                            C 0 I 4
s Macaca_leonina.k141_467472                                 2577 4 -      7381 T-----GTA----
i Macaca_leonina.k141_467472                            C 0 I 4
s Macaca_maura.k141_251854                                  45794 4 -     79256 T-----GTA----
i Macaca_maura.k141_251854                              C 0 I 4
s Macaca_mulatta.NC_041755.1                            196035901 4 + 196197964 T-----GTA----
i Macaca_mulatta.NC_041755.1                            C 0 I 4
s Macaca_nemestrina.KQ004885.1                           11446071 4 +  11645122 T-----GTA----
i Macaca_nemestrina.KQ004885.1                          C 0 I 4
s Macaca_nigra.k141_282495                                   4741 4 -     46448 T-----GTA----
i Macaca_nigra.k141_282495                              C 0 I 4
s Macaca_radiata.k141_3680256                                2415 4 -     13212 T-----GTA----
i Macaca_radiata.k141_3680256                           C 0 I 4
s Macaca_siberu.k141_741907                                 16094 4 -     55006 T-----GTA----
i Macaca_siberu.k141_741907                             C 0 I 4
s Macaca_silenus.Contig12                                43841210 4 +  43892939 T-----GTA----
i Macaca_silenus.Contig12                               C 0 I 4
s Macaca_thibetana.k99_662710                               17380 4 -     24607 T-----GTA----
i Macaca_thibetana.k99_662710                           C 0 I 4
s Macaca_tonkeana.k141_2870633                               4746 4 -     27140 T-----GTA----
i Macaca_tonkeana.k141_2870633                          C 0 I 4
s Mandrillus_leucophaeus.scaffold125                     43437795 4 -  43563597 T-----GTA----
i Mandrillus_leucophaeus.scaffold125                    C 0 I 4
s Mandrillus_sphinx.Contig144                             4450615 4 -   4543643 T-----GTA----
i Mandrillus_sphinx.Contig144                           C 0 I 4
s Manis_javanica.JSZB01003966.1                            146299 4 +    252755 T-----GTA----
i Manis_javanica.JSZB01003966.1                         C 0 I 4
s Manis_pentadactyla.KN017078.1                             36442 4 +     58827 T-----GTA----
i Manis_pentadactyla.KN017078.1                         C 0 I 4
s Marmota_marmota.CZRN01000005.1                         36873917 4 +  64221397 G-----GTA----
i Marmota_marmota.CZRN01000005.1                        C 0 I 4
s Megaderma_lyra.MegLyr_scaffold_3562                       64670 4 -    234502 T-----GTA----
i Megaderma_lyra.MegLyr_scaffold_3562                   I 1 I 4
s Mellivora_capensis.MelCap_flattened_line_15433             1245 4 -     87323 T-----GTA----
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 I 4
s Meriones_unguiculatus.MerUng_scaffold_52233               12971 4 +     15977 T-----GTA----
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 I 4
s Mesocricetus_auratus.KB708139.1                         1047181 4 -  26018355 T-----CTA----
i Mesocricetus_auratus.KB708139.1                       C 0 I 4
s Mesoplodon_bidens.MesBid_scaffold_227248                    549 4 -      1377 T-----GCA----
i Mesoplodon_bidens.MesBid_scaffold_227248              C 0 I 4
s Microcebus_murinus.CM007691.1                          16510511 4 +  47401472 T-----GTA----
i Microcebus_murinus.CM007691.1                         C 0 I 4
s Microgale_talazaci.MicTal_scaffold_34660                  34700 1 -     48017 --------T----
i Microgale_talazaci.MicTal_scaffold_34660              C 0 I 4
s Micronycteris_hirsuta.MicHir_scaffold_37978               22939 9 -     32043 TTATAATTA----
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 I 4
s Microtus_ochrogaster.CM001673.1                        22820321 4 -  98408828 T-----GTA----
i Microtus_ochrogaster.CM001673.1                       C 0 I 5
s Miniopterus_natalensis.LDJU01000022.1                   8209921 4 +  10048721 T-----GTA----
i Miniopterus_natalensis.LDJU01000022.1                 C 0 I 4
s Miniopterus_schreibersii.MinSch_scaffold_24116            34575 4 +     45743 T-----GTA----
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 I 4
s Miopithecus_ogouensis.k141_2935907                         2344 4 +     29742 T-----GTA----
i Miopithecus_ogouensis.k141_2935907                    C 0 I 4
s Mirounga_angustirostris.MirAng_flattened_line_8852        11742 4 -    104932 T-----GCA----
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 I 4
s Mirza_zaza.k141_226143                                     5900 4 +      8497 T-----GTA----
i Mirza_zaza.k141_226143                                C 0 I 4
s Monodon_monoceros.MonMon_M_scaffold_5598                 146646 4 +    154973 T-----GCA----
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 I 4
s Mormoops_blainvillei.MorMeg_scaffold_2952                161462 4 +    265003 T-----GTA----
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 I 4
s Moschus_moschiferus.MosMos_scaffold_78805                  1737 4 -     19904 T-----GTA----
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 I 4
s Mungos_mungo.MunMun_flattened_line_8729                  145160 4 -    168139 T-----GTA----
i Mungos_mungo.MunMun_flattened_line_8729               C 0 I 4
s Murina_feae.MurFea_scaffold_2254                          19772 4 -    100666 T-----GTA----
i Murina_feae.MurFea_scaffold_2254                      C 0 I 4
s Mus_caroli.LT608236.1                                  70766814 4 +  92629107 T-----GTA----
i Mus_caroli.LT608236.1                                 C 0 I 4
s Mus_musculus.chr16                                     75489874 4 +  98207768 T-----GTA----
i Mus_musculus.chr16                                    C 0 I 4
s Mus_pahari.LT608305.1                                  67556107 4 +  89017189 T-----GTA----
i Mus_pahari.LT608305.1                                 C 0 I 4
s Mus_spretus.CM004110.1                                 74331050 4 +  97876770 T-----GTA----
i Mus_spretus.CM004110.1                                C 0 I 4
s Muscardinus_avellanarius.MusAve_scaffold_9643             12070 4 +     98495 T-----ATA----
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 I 4
s Mustela_putorius.JH417978.1                             4424614 4 -  28371801 T-----GTA----
i Mustela_putorius.JH417978.1                           C 0 I 4
s Myotis_brandtii.KE161952.1                               968083 4 +   8389877 T-----GTA----
i Myotis_brandtii.KE161952.1                            C 0 I 4
s Myotis_davidii.KB114863.1                               5019756 4 +   6462685 T-----GTA----
i Myotis_davidii.KB114863.1                             C 0 I 4
s Myotis_lucifugus.GL429887.1                             3465665 4 -   3747815 T-----GTA----
i Myotis_lucifugus.GL429887.1                           C 0 I 4
s Myotis_myotis.MyoMyo_scaffold_6123                        10875 4 +     66751 T-----GTA----
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 I 4
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             5268 4 -      8794 T-----GTA----
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 I 4
s Nannospalax_galili.KL201303.1                            118921 4 +    362372 T-----GCA----
i Nannospalax_galili.KL201303.1                         C 0 I 4
s Nasalis_larvatus.k141_153429                               8851 4 +     48152 T-----GTA----
i Nasalis_larvatus.k141_153429                          C 0 I 4
s Neomonachus_schauinslandi.NINY01007774.1                4485133 4 -  14209539 T-----GCA----
i Neomonachus_schauinslandi.NINY01007774.1              C 0 I 4
s Neophocaena_asiaeorientalis.KZ688543.1                  3951258 4 -   4490290 T-----GCA----
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 I 4
s Nomascus_annamensis.k141_720788                             233 4 -      1065 T-----GTA----
i Nomascus_annamensis.k141_720788                       I 5 I 4
s Nomascus_concolor.k141_226614                              1537 4 -      5092 T-----GTA----
i Nomascus_concolor.k141_226614                         C 0 I 4
s Nomascus_gabriellae.k141_39679                              508 4 -     17937 T-----GTA----
i Nomascus_gabriellae.k141_39679                        C 0 I 4
s Nomascus_siki_b.tarseq_80                             25255 4 -  18771707 T-----GTA----
i Nomascus_siki_b.tarseq_80                         C 0 I 4
s Nomascus_siki_a.k141_595747                                  2958 4 +      4512 T-----GTA----
i Nomascus_siki_a.k141_595747                             C 0 I 4
s Nyctereutes_procyonoides.CAJHUB010000786.1                31167 4 +   3668941 T-----GTA----
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 I 4
s Nycticebus_bengalensis.LG16                            65567370 4 -  95554990 T-----GGA----
i Nycticebus_bengalensis.LG16                           C 0 I 4
s Nycticebus_coucang.k141_2051882                            4096 4 +      6470 T-----GGA----
i Nycticebus_coucang.k141_2051882                       C 0 I 4
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65669705 4 +  89412551 T-----GGA----
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 I 4
s Ochotona_princeps.JH802095.1                            4996248 4 -  23139505 T-----GTA----
i Ochotona_princeps.JH802095.1                          C 0 I 4
s Odobenus_rosmarus.KB229369.1                             679799 4 -   3126709 T-----GTA----
i Odobenus_rosmarus.KB229369.1                          C 0 I 4
s Odocoileus_virginianus.KZ101650.1                       1079943 4 +   1425656 T-----GCA----
i Odocoileus_virginianus.KZ101650.1                     C 0 I 4
s Okapia_johnstoni.LVCL01S0017931.1                         37235 4 +     78940 t-----GTA----
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 I 4
s Ondatra_zibethicus.OndZib_scaffold_6821                  125575 4 +    145789 T-----GTA----
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 I 4
s Onychomys_torridus.OnyTor_scaffold_12578                  37361 4 +     62360 T-----GTA----
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 I 4
s Orcinus_orca.KB316965.1                                 7224943 4 -   7562323 T-----GCA----
i Orcinus_orca.KB316965.1                               C 0 I 4
s Orycteropus_afer.OryAfe_flattened_line_13509              57752 4 -     66828 T-----ATT----
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 I 4
s Oryctolagus_cuniculus.CM000803.1                      141876534 4 + 163896628 T-----GTA----
i Oryctolagus_cuniculus.CM000803.1                      C 0 I 4
s Otocyon_megalotis.JAEUCK010005121.1                      308450 4 -    505867 T-----GTA----
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 I 4
s Otolemur_crassicaudatus.k141_505435                         995 4 -     53940 T-----GTA----
i Otolemur_crassicaudatus.k141_505435                   C 0 I 4
s Otolemur_garnettii.GL873528.1                          18008975 4 -  38779656 T-----GTA----
i Otolemur_garnettii.GL873528.1                         C 0 I 4
s Ovis_aries.CM001582.2                                 134077513 4 - 275406953 T-----GTA----
i Ovis_aries.CM001582.2                                 C 0 I 4
s Ovis_canadensis.OviCan_scaffold_6251                      78728 4 +    140051 T-----GTA----
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 I 4
s Pan_paniscus.AJFE02002857.1                                 648 8 -      1091 T-----GTAGCTG
i Pan_paniscus.AJFE02002857.1                           I 69 C 0
s Pan_troglodytes.KZ622857.1                               327816 8 +    772158 T-----GTAGCTG
i Pan_troglodytes.KZ622857.1                            I 69 I 17
s Panthera_onca.PanOnc_flattened_line_1615                  34575 4 +    295523 T-----GTA----
i Panthera_onca.PanOnc_flattened_line_1615              C 0 I 4
s Panthera_pardus.KV860323.1                              3638309 4 +  18214204 T-----GTA----
i Panthera_pardus.KV860323.1                            C 0 I 4
s Panthera_tigris.KE721879.1                              5027984 4 -   6340057 T-----GTA----
i Panthera_tigris.KE721879.1                            C 0 I 4
s Pantholops_hodgsonii.KE114631.1                         1066363 4 -   1292953 T-----GTA----
i Pantholops_hodgsonii.KE114631.1                       C 0 I 4
s Papio_anubis.CM001492.2                               188156582 4 - 188283584 T-----GTA----
i Papio_anubis.CM001492.2                               C 0 I 4
s Papio_cynocephalus.k141_883042                             4899 4 +      5367 T-----GTA----
i Papio_cynocephalus.k141_883042                        C 0 I 4
s Papio_hamadryas.Contig15                               47513967 4 +  47705337 T-----GTA----
i Papio_hamadryas.Contig15                              C 0 I 4
s Papio_kindae.k141_5458022                                 67943 4 -    104429 T-----GTA----
i Papio_kindae.k141_5458022                             C 0 I 4
s Papio_papio.k141_979496                                    6479 4 +     14967 T-----GTA----
i Papio_papio.k141_979496                               C 0 I 4
s Papio_ursinus.k141_1345919                                 2338 4 -      7628 T-----GTA----
i Papio_ursinus.k141_1345919                            C 0 I 4
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    116037 4 -    135482 T-----ATA----
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 I 4
s Perodicticus_ibeanus.k141_117958                           5686 4 -     23713 T-----GTA----
i Perodicticus_ibeanus.k141_117958                      C 0 I 4
s Perodicticus_potto.k141_713187                            24999 4 -     27972 T-----GTA----
i Perodicticus_potto.k141_713187                        C 0 I 4
s Perognathus_longimembris.PerPac_flattened_line_22291      44832 4 -     45160 T-----ATA----
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 I 4
s Peromyscus_maniculatus.KI615518.1                       4950612 4 -   8017169 T-----GTA----
i Peromyscus_maniculatus.KI615518.1                     C 0 I 4
s Petromus_typicus.PetTyp_scaffold_33007                    12685 4 -     36578 T-----GCA----
i Petromus_typicus.PetTyp_scaffold_33007                C 0 I 4
s Phocoena_phocoena.PhoPho_flattened_line_11948            121548 4 -    122454 T-----GCA----
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 I 4
s Piliocolobus_badius.k141_1987485                           2365 4 -      5908 T-----GTA----
i Piliocolobus_badius.k141_1987485                      C 0 I 4
s Piliocolobus_gordonorum.k141_1270531                       2989 4 -     17985 T-----GTA----
i Piliocolobus_gordonorum.k141_1270531                  C 0 I 4
s Piliocolobus_kirkii.k141_929665                            2356 4 +      7694 T-----GTA----
i Piliocolobus_kirkii.k141_929665                       C 0 I 4
s Piliocolobus_tephrosceles.PDMG02000036.1               26740834 4 +  26888534 T-----GTA----
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 I 4
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            97700 4 +    112873 T-----GTA----
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 I 4
s Pithecia_albicans.k141_991845                             44098 4 -     61926 T-----GTA----
i Pithecia_albicans.k141_991845                         C 0 I 4
s Pithecia_chrysocephala.k141_159118                        25483 4 +     78826 T-----GTA----
i Pithecia_chrysocephala.k141_159118                    C 0 I 4
s Pithecia_hirsuta.k141_1152968                              9530 4 -     15800 T-----GTA----
i Pithecia_hirsuta.k141_1152968                         C 0 I 4
s Pithecia_mittermeieri.k141_2119203                        12729 4 -     16101 T-----GTA----
i Pithecia_mittermeieri.k141_2119203                    C 0 I 4
s Pithecia_pissinattii.k141_1102319                          5957 4 +      9673 T-----GTA----
i Pithecia_pissinattii.k141_1102319                     C 0 I 4
s Pithecia_pithecia.tarseq_313                           13474957 4 -  19735023 T-----GTA----
i Pithecia_pithecia.tarseq_313                          C 0 I 4
s Pithecia_vanzolinii.k141_831006                           13860 4 -     31692 T-----GTA----
i Pithecia_vanzolinii.k141_831006                       C 0 I 4
s Platanista_gangetica.PlaMin_flattened_line_72990           5634 4 +     21690 T-----GCA----
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 I 4
s Plecturocebus_bernhardi.k141_959214                       23200 4 +     44506 T-----GTA----
i Plecturocebus_bernhardi.k141_959214                   C 0 I 4
s Plecturocebus_brunneus.k141_498086                        23412 4 +     67491 T-----GTA----
i Plecturocebus_brunneus.k141_498086                    C 0 I 4
s Plecturocebus_caligatus.k141_2539816                      13652 4 -     98129 T-----GTA----
i Plecturocebus_caligatus.k141_2539816                  C 0 I 4
s Plecturocebus_cinerascens.k141_744510                     23252 4 +    147771 T-----GTA----
i Plecturocebus_cinerascens.k141_744510                 C 0 I 4
s Plecturocebus_cupreus.k141_1223294                        23509 4 -     23762 T-----GTA----
i Plecturocebus_cupreus.k141_1223294                    C 0 I 4
s Plecturocebus_dubius.k141_3565563                          3971 4 -     55515 T-----GTA----
i Plecturocebus_dubius.k141_3565563                     C 0 I 4
s Plecturocebus_grovesi.k141_242819                         23325 4 +    152463 T-----GTA----
i Plecturocebus_grovesi.k141_242819                     C 0 I 4
s Plecturocebus_hoffmannsi.k141_985533                       1042 4 -    119457 T-----GTA----
i Plecturocebus_hoffmannsi.k141_985533                  C 0 I 4
s Plecturocebus_miltoni.k141_841561                         13048 4 +    134592 T-----GTA----
i Plecturocebus_miltoni.k141_841561                     C 0 I 4
s Plecturocebus_moloch.k141_890597                          23635 4 -     75465 T-----GTA----
i Plecturocebus_moloch.k141_890597                      C 0 I 4
s Pongo_abelii.NDHI03003816.1                              187488 4 -    373494 T-----GTA----
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19808136 4 +  19899266 T-----GTA----
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               6095 4 -     15069 T-----GTA----
i Presbytis_comata.k141_672698                          C 0 I 4
s Presbytis_mitrata.k141_860013                              6225 4 +     14865 T-----GTA----
i Presbytis_mitrata.k141_860013                         C 0 I 4
s Procavia_capensis.ProCapCap_scaffold_149274                2189 4 -      9567 T-----GTA----
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 I 11
s Prolemur_simus.MPIZ01000048.1                           6848867 4 +  12164890 T-----GCA----
i Prolemur_simus.MPIZ01000048.1                         C 0 I 4
s Propithecus_coquerelli.NW_012147863.1                     17176 4 -     30946 T-----GTA----
i Propithecus_coquerelli.NW_012147863.1                 C 0 I 4
s Propithecus_coronatus.k141_1353159                         3933 4 +     11805 T-----GTA----
i Propithecus_coronatus.k141_1353159                    C 0 I 4
s Propithecus_diadema.k141_577245                           43276 4 +     52369 T-----GTA----
i Propithecus_diadema.k141_577245                       C 0 I 4
s Propithecus_edwardsi.k141_1317105                         35663 4 -     44753 T-----GTA----
i Propithecus_edwardsi.k141_1317105                     C 0 I 4
s Propithecus_perrieri.k141_7554                            17587 4 +     27322 T-----GTA----
i Propithecus_perrieri.k141_7554                        C 0 I 4
s Propithecus_tattersalli.k141_907138                       17223 4 -     53241 T-----GTA----
i Propithecus_tattersalli.k141_907138                   C 0 I 4
s Propithecus_verreauxi.k141_158021                         39487 4 -     48185 T-----GTA----
i Propithecus_verreauxi.k141_158021                     C 0 I 4
s Psammomys_obesus.NESX01026517.1                           34519 4 +     77221 T-----GTA----
i Psammomys_obesus.NESX01026517.1                       C 0 I 4
s Pteronotus_parnellii.KE867983.1                            4107 4 -     27784 T-----GTA----
i Pteronotus_parnellii.KE867983.1                       C 0 I 4
s Pteronura_brasiliensis.PteBra_flattened_line_1343        246924 4 -    344369 T-----GTA----
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 I 4
s Pteropus_alecto.KB031157.1                             13246224 4 -  17261082 T-----GTA----
i Pteropus_alecto.KB031157.1                            C 0 I 4
s Pteropus_vampyrus.KN525959.1                             604175 4 -   3946241 T-----GTA----
i Pteropus_vampyrus.KN525959.1                          C 0 I 4
s Puma_concolor.QAVW01000427.1                          131534562 4 - 161321710 T-----GTA----
i Puma_concolor.QAVW01000427.1                          C 0 I 4
s Pygathrix_cinerea.k141_374971                             30216 4 +     56732 T-----GTA----
i Pygathrix_cinerea.k141_374971                         C 0 I 4
s Pygathrix_nigripes_b.ctg79                                 6806704 4 +   6970761 T-----GTA----
i Pygathrix_nigripes_b.ctg79                               C 0 I 4
s Pygathrix_nigripes_a.k141_101123                             6095 4 +     18040 T-----GTA----
i Pygathrix_nigripes_a.k141_101123                        C 0 I 4
s Rangifer_tarandus.RanTarSib_scaffold_24239                16022 4 +     68503 T-----GCA----
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 I 4
s Rattus_norvegicus.chr11                                13915816 4 +  90463843 T-----GTA----
i Rattus_norvegicus.chr11                               C 0 I 4
s Rhinolophus_sinicus.LVEH01000179.1                      1788051 4 +   2252614 G-----GTA----
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 I 4
s Rhinopithecus_bieti.k119_554384                             507 4 -     17045 T-----GTA----
i Rhinopithecus_bieti.k119_554384                       C 0 I 4
s Rhinopithecus_roxellana.NC_044549.1                   206377984 4 - 206558726 T-----GTA----
i Rhinopithecus_roxellana.NC_044549.1                   C 0 I 4
s Rhinopithecus_strykeri.ctg4                            44856898 4 -  45163003 T-----GTA----
i Rhinopithecus_strykeri.ctg4                           C 0 I 4
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                19558 4 +    109198 T-----GTA----
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 I 4
s Saiga_tatarica.SaiTat_scaffold_82192                       8189 4 +     12214 T-----GTA----
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 I 4
s Saimiri_boliviensis.NW_024100938.1                     15673062 4 -  43202129 T-----GTA----
i Saimiri_boliviensis.NW_024100938.1                    C 0 I 4
s Saimiri_cassiquiarensis.k141_808270                        4975 4 +     34089 T-----GTA----
i Saimiri_cassiquiarensis.k141_808270                   C 0 I 4
s Saimiri_macrodon.k141_2087127                              4917 4 -     60842 T-----GTA----
i Saimiri_macrodon.k141_2087127                         C 0 I 4
s Saimiri_oerstedii.k141_841116                              5010 4 +     67014 T-----GTA----
i Saimiri_oerstedii.k141_841116                         C 0 I 4
s Saimiri_sciureus.k141_1947592                              4988 4 +     60816 T-----GTA----
i Saimiri_sciureus.k141_1947592                         C 0 I 4
s Saimiri_ustus.k141_1282476                                 4925 4 -     76454 T-----GTA----
i Saimiri_ustus.k141_1282476                            C 0 I 4
s Sapajus_apella.ctg10                                   17341650 4 -  30362882 T-----GTA----
i Sapajus_apella.ctg10                                  C 0 I 4
s Sapajus_macrocephalus.k141_966464                         21011 4 -     62485 T-----GTA----
i Sapajus_macrocephalus.k141_966464                     C 0 I 4
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   32529 4 -    114521 T-----GTA----
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 I 4
s Semnopithecus_entellus.k141_1572367                        3708 4 +     15331 T-----GTA----
i Semnopithecus_entellus.k141_1572367                   C 0 I 4
s Semnopithecus_hypoleucos.k141_761524                       9101 4 +     20762 T-----GTA----
i Semnopithecus_hypoleucos.k141_761524                  C 0 I 4
s Semnopithecus_johnii.k141_785014                         119104 4 +    130994 T-----GTA----
i Semnopithecus_johnii.k141_785014                      C 0 I 4
s Semnopithecus_priam.k141_410937                           37890 4 +     46263 T-----GTA----
i Semnopithecus_priam.k141_410937                       C 0 I 4
s Semnopithecus_schistaceus.k141_387461                     31010 4 +     42640 T-----GTA----
i Semnopithecus_schistaceus.k141_387461                 C 0 I 4
s Semnopithecus_vetulus.k141_1143185                        14050 4 +     30600 T-----GTA----
i Semnopithecus_vetulus.k141_1143185                    C 0 I 4
s Sigmodon_hispidus.SigHis_scaffold_11332                  100560 4 -    120886 T-----GTA----
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 I 4
s Solenodon_paradoxus.SolPar_flattened_line_1012            19112 4 +    739146 T-----GTA----
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 I 4
s Sorex_araneus.JH798170.1                               17765597 4 -  27805282 T-----ATA----
i Sorex_araneus.JH798170.1                              C 0 I 716
s Spermophilus_dauricus.KZ294190.1                        2240009 4 +   2842873 G-----GTA----
i Spermophilus_dauricus.KZ294190.1                      C 0 I 4
s Spilogale_gracilis.SpiGra_flattened_line_905             235044 4 -    276980 T-----GTA----
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 I 4
s Suricata_suricatta.SurSur_flattened_line_20339            27820 4 +     62062 T-----GTA----
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 I 4
s Sus_scrofa.CM000824.4                                 189272100 4 + 218635234 T-----ATA----
i Sus_scrofa.CM000824.4                                 C 0 I 4
s Symphalangus_syndactylus.tarseq_24                        15240 4 -  13920577 T-----GTA----
i Symphalangus_syndactylus.tarseq_24                    C 0 I 4
s Tadarida_brasiliensis.TadBra_scaffold_61492                 486 4 +     20549 T-----GTA----
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 I 4
s Tamandua_tetradactyla.TamTet_scaffold_26877               14932 4 +     45698 T-----GTA----
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 I 4
s Tapirus_indicus.TapInd_scaffold_176                      807353 4 +   1148477 T-----GTA----
i Tapirus_indicus.TapInd_scaffold_176                   C 0 I 4
s Tapirus_terrestris.TapTer_scaffold_14939                  58064 4 +     99546 T-----GTA----
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 I 4
s Tarsius_lariang.k141_609102                               26779 4 +     42269 T-----GCT----
i Tarsius_lariang.k141_609102                           C 0 I 4
s Tarsius_wallacei.k141_48636                               60095 4 +     65473 T-----GCT----
i Tarsius_wallacei.k141_48636                           C 0 I 4
s Theropithecus_gelada.CM009951.1                       194008104 4 - 194193292 T-----GTA----
i Theropithecus_gelada.CM009951.1                       C 0 I 4
s Tolypeutes_matacus.TolMat_scaffold_269431                  5752 4 +      6782 T-----GTA----
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 I 4
s Tonatia_saurophila.TonSau_scaffold_3334                  136099 9 -    259118 TTATAATTA----
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 I 4
s Trachypithecus_auratus.k141_738098                        27206 4 +     38948 T-----GTA----
i Trachypithecus_auratus.k141_738098                    C 0 I 4
s Trachypithecus_crepusculus.k141_1588528                   20938 4 -     32910 T-----GTA----
i Trachypithecus_crepusculus.k141_1588528               C 0 I 4
s Trachypithecus_cristatus.k141_1011511                      2324 4 -     12939 T-----GTA----
i Trachypithecus_cristatus.k141_1011511                 C 0 I 4
s Trachypithecus_francoisi.k141_768164                       2260 4 -     14244 T-----GTA----
i Trachypithecus_francoisi.k141_768164                  C 0 I 4
s Trachypithecus_geei.k141_670367                           43659 4 -     54611 T-----GTA----
i Trachypithecus_geei.k141_670367                       C 0 I 4
s Trachypithecus_germaini.k141_868450                        1462 4 -     11566 T-----GTA----
i Trachypithecus_germaini.k141_868450                   C 0 I 4
s Trachypithecus_hatinhensis.k141_504423                     3639 4 -     15592 T-----GTA----
i Trachypithecus_hatinhensis.k141_504423                C 0 I 4
s Trachypithecus_laotum.k141_760702                          2295 4 +     14371 T-----GTA----
i Trachypithecus_laotum.k141_760702                     C 0 I 4
s Trachypithecus_leucocephalus.k141_381681                    576 4 +     12481 T-----GTA----
i Trachypithecus_leucocephalus.k141_381681              C 0 I 4
s Trachypithecus_melamera.k141_699241                         452 4 -     24393 T-----GTA----
i Trachypithecus_melamera.k141_699241                   C 0 I 4
s Trachypithecus_obscurus.k141_1115109                       5698 4 -     28054 T-----GTA----
i Trachypithecus_obscurus.k141_1115109                  C 0 I 4
s Trachypithecus_phayrei.ctg3                            44660498 4 -  44834318 T-----GTA----
i Trachypithecus_phayrei.ctg3                           C 0 I 4
s Trachypithecus_pileatus.k141_1022309                       2806 4 +     13828 T-----GTA----
i Trachypithecus_pileatus.k141_1022309                  C 0 I 4
s Tragulus_javanicus.TraJav_scaffold_14717                   5415 4 +     90398 T-----GTA----
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 I 4
s Trichechus_manatus.JH594618.1                          16085133 4 +  31416278 T-----GTA----
i Trichechus_manatus.JH594618.1                         C 0 I 13
s Tupaia_chinensis.KB320831.1                             2793151 3 -   3938065 T-----GT-----
i Tupaia_chinensis.KB320831.1                           C 0 I 2
s Tupaia_tana.TupTan_flattened_line_68454                    5351 3 +     13056 T-----GT-----
i Tupaia_tana.TupTan_flattened_line_68454               C 0 I 2
s Tursiops_truncatus.MRVK01000923.1                      69313659 4 -  96451834 T-----GCA----
i Tursiops_truncatus.MRVK01000923.1                     C 0 I 4
s Uropsilus_gracilis.UroGra_scaffold_69449                   1561 4 +     10241 T-----GTA----
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 I 4
s Ursus_maritimus.KK498671.1                              6515053 4 +  28682327 T-----GCA----
i Ursus_maritimus.KK498671.1                            C 0 I 4
s Varecia_rubra.k141_432109                                  5564 4 -     20643 T-----GTA----
i Varecia_rubra.k141_432109                             C 0 I 4
s Varecia_variegata.k141_775891                             25105 4 -     33872 T-----GTA----
i Varecia_variegata.k141_775891                         C 0 I 4
s Vicugna_pacos.KN269600.1                                1524905 4 -   2331223 T-----GCA----
i Vicugna_pacos.KN269600.1                              C 0 I 4
s Vulpes_lagopus.VulLag_flattened_line_2045                138547 4 -    281493 T-----GTA----
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 I 4
s Xerus_inauris.XerIna_scaffold_7898                       127123 4 -    134049 T-----GTA----
i Xerus_inauris.XerIna_scaffold_7898                    C 0 I 4
s Zalophus_californianus.ZalCal_flattened_line_4097        214526 4 -    227762 T-----GTA----
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 I 4
s Zapus_hudsonius.ZapHud_scaffold_64392                     15448 4 -     20485 T-----GGA----
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 I 4
s Ziphius_cavirostris.ZipCav_flattened_line_127025           7158 4 -      8775 T-----GCA----
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 I 4
e Macroglossus_sobrinus.MacSob_scaffold_879                701732 90 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             38964 0 -     47444 C
e Noctilio_leporinus.NocLep_scaffold_12062                  49971 0 +     94413 C
e Elephantulus_edwardii.JH947210.1                        7816071 13 +  15467074 I
e Crocidura_indochinensis.CroInd_scaffold_848148              199 0 +      1327 C
e Hylobates_klossii.k141_285563                               343 193 +      1026 I
e Octodon_degus.JH651621.1                                3685767 0 +  10294119 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     90228 0 -    117718 C
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 30936 0 -     67205 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               12093 17 +    209709 AAGA-TAA-A--AAG-TCTGAA
s Acinonyx_jubatus.LLWD01000356.1                         2034231 17 +   3721120 AAGA-TAA-A--AAC-CCTGAA
i Acinonyx_jubatus.LLWD01000356.1                       I 4 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    112846 17 -    189883 TAAA-TAG-A--AAG-CTGGAA
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 4 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10657569 17 +  23371972 AAGA-TAA-A--AAG-CCTGAA
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 4 C 0
s Ailurus_fulgens.LNAC01000003.1                          7094916 17 -  16596857 AAGA-TAA-A--AAG-CCTGAA
i Ailurus_fulgens.LNAC01000003.1                        I 4 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   17131 15 -     22067 AAGA-CAG-A--G---ACTGAG
i Allactaga_bullata.AllBul_scaffold_70162               I 4 C 0
s Allenopithecus_nigroviridis.k141_2469532                   1603 17 -     60446 AAGA-TAA-A--ATG-TCTGAA
i Allenopithecus_nigroviridis.k141_2469532              I 4 C 0
s Allochrocebus_lhoesti.k141_3566948                         2323 17 -     29318 AAGA-TAA-A--ACG-TCTGAA
i Allochrocebus_lhoesti.k141_3566948                    I 4 C 0
s Allochrocebus_preussi.k141_1108977                         1258 17 +     38766 AAGA-TAA-A--ACG-TCTGAA
i Allochrocebus_preussi.k141_1108977                    I 4 C 0
s Allochrocebus_solatus.k141_371672                          2217 17 -     80423 AAGA-TAA-A--ACG-TCTGAA
i Allochrocebus_solatus.k141_371672                     I 4 C 0
s Alouatta_belzebul.k141_1818029                            10520 17 -     18050 AAGA-TAA-A--AAG-TCTGAA
i Alouatta_belzebul.k141_1818029                        I 4 C 0
s Alouatta_caraya.k141_1710068                                233 17 +      1555 AAGA-TAA-A--AAG-TCTGAA
i Alouatta_caraya.k141_1710068                          I 4 C 0
s Alouatta_discolor.k141_811576                             11193 17 -     21359 AAGA-TAA-A--AAG-TCTGAA
i Alouatta_discolor.k141_811576                         I 4 C 0
s Alouatta_juara.k141_1244470                                 812 17 +      2129 AAGA-TAA-A--AAG-TCTGAA
i Alouatta_juara.k141_1244470                           I 4 C 0
s Alouatta_macconnelli.k141_2177643                           196 17 -      1868 AAGA-TAA-A--AAG-TCTGAA
i Alouatta_macconnelli.k141_2177643                     I 4 C 0
s Alouatta_nigerrima.k141_3537692                             245 17 +      1660 AAGA-TAA-A--AAG-TCTGAA
i Alouatta_nigerrima.k141_3537692                       I 4 C 0
s Alouatta_palliata.k141_2764429                              162 17 -      1480 AAGA-TAA-A--AAG-TCTGAA
i Alouatta_palliata.k141_2764429                        I 4 C 0
s Alouatta_puruensis.k141_1284840                            4238 17 -      4927 AAGA-TAA-A--AAG-TCTGAA
i Alouatta_puruensis.k141_1284840                       I 4 C 0
s Alouatta_seniculus.k141_1531728                             377 17 -      1692 AAGA-TAA-A--AAG-TCTGAA
i Alouatta_seniculus.k141_1531728                       I 4 C 0
s Ammotragus_lervia.NIVO01013474.1                        3520370 17 +   4113121 AAGA-TAA-A--AAG-CCTGAA
i Ammotragus_lervia.NIVO01013474.1                      I 4 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      390571 17 -    631301 AACA-TAT-C--AAG-CCTGAA
i Anoura_caudifer.AnoCau_scaffold_422                   I 4 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            30951 17 +     33004 AAGA-TAA-A--AAG-CCTGAA
i Antilocapra_americana.AntAmePen_scaffold_42841        I 4 C 0
s Aotus_azarae.k141_3170768                                 62872 17 +     78111 ATGA-TAA-A--AAG-TCTGAA
i Aotus_azarae.k141_3170768                             I 4 C 0
s Aotus_griseimembra.k141_3275623                            5814 17 +     22701 ACGA-TAA-A--AAG-TCTGAA
i Aotus_griseimembra.k141_3275623                       I 4 C 0
s Aotus_nancymaae.KZ196176.1                              5749771 17 +   9889416 ACGA-TAA-A--AAG-TCTGAA
i Aotus_nancymaae.KZ196176.1                            I 4 C 0
s Aotus_trivirgatus.k141_1740727                             6360 17 -    104377 ACGA-TAA-A--AAG-TCTGAA
i Aotus_trivirgatus.k141_1740727                        I 4 C 0
s Aotus_vociferans.k141_718647                               6362 17 +     23246 ACGA-TAA-A--AAG-TCTGAA
i Aotus_vociferans.k141_718647                          I 4 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     3928  7 +      5067 AAGA-TTA--------------
i Aplodontia_rufa.AprRuf_scaffold_156013                I 4 I 6
s Arctocebus_calabarensis.k141_587554                        1291 18 +      9265 GACAGTAC-A--AAG-TCAGAA
i Arctocebus_calabarensis.k141_587554                   I 4 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 8976 18 -     29036 AACATTAT-C--AAG-ACTGAA
i Artibeus_jamaicensis.ArtJam_scaffold_41619            I 4 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9539631 17 +  39197703 AAGA-CAA-A--AAG-TCTGAA
i Ateles_geoffroyi_b.tarseq_2582                           I 4 C 0
s Ateles_belzebuth.k141_1348307                             60902 17 +     85812 AAGA-CAA-A--AAG-TCTGAA
i Ateles_belzebuth.k141_1348307                         I 4 C 0
s Ateles_chamek.k141_1072810                                11915 17 +     89302 AAGA-CAA-A--AAG-TCTGAA
i Ateles_chamek.k141_1072810                            I 4 C 0
s Ateles_geoffroyi_a.k141_1300742                             16418 17 -     58268 AAGA-CAA-A--AAG-TCTGAA
i Ateles_geoffroyi_a.k141_1300742                         I 4 C 0
s Ateles_marginatus.k141_899112                             64410 17 +    119057 AAGA-CAA-A--AAG-TCTGAA
i Ateles_marginatus.k141_899112                         I 4 C 0
s Ateles_paniscus.k141_1631200                               6381 17 -     25888 AAGA-CAA-A--AAG-TCTGAA
i Ateles_paniscus.k141_1631200                          I 4 C 0
s Avahi_laniger.k141_2840928                                 7026 17 -     16375 AGCAT-AA-A--AAG-TTGGAA
i Avahi_laniger.k141_2840928                            I 4 C 0
s Avahi_peyrierasi.k141_798820                                645 17 +      6337 AGCAT-AA-A--AAG-TTGGAA
i Avahi_peyrierasi.k141_798820                          I 4 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26380440 17 +  51448160 AAGA-TGA-A--AAG-CCTGAA
i Balaenoptera_acutorostrata.KI537095.1                 I 4 C 0
s Balaenoptera_bonaerensis.DF502048.1                        5612 17 -     13118 AAGA-TGA-A--AAG-CCTGAA
i Balaenoptera_bonaerensis.DF502048.1                   I 4 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   43440 17 -     72089 AAGA-TAA-A--AAG-CCTGAA
i Beatragus_hunteri.BeaHun_scaffold_21644               I 4 C 0
s Bison_bison.KN264915.1                                  6560103 17 +   6870073 AAGA-TAA-A--AAG-CCTGAA
i Bison_bison.KN264915.1                                I 4 C 0
s Bos_indicus.CM003021.1                                138140212 17 - 161108492 AAGA-TAA-A--AAG-CCTGAA
i Bos_indicus.CM003021.1                                I 4 C 0
s Bos_mutus.JH883513.1                                     572753 17 -    998990 AAGA-TAA-A--AAG-CCTGAA
i Bos_mutus.JH883513.1                                  I 4 C 0
s Bos_taurus.CM000177.6                                 136295945 17 - 158972876 AAGA-TAA-A--AAG-CCTGAA
i Bos_taurus.CM000177.6                                 I 4 C 0
s Bubalus_bubalis.KI419065.1                              1233024 17 -   1914593 aaaa-taa-a--aag-cctGAA
i Bubalus_bubalis.KI419065.1                            I 4 C 0
s Cacajao_ayresi.k141_724503                               114268 17 -    171031 AAGA-CAA-A--AAG-TCTGAA
i Cacajao_ayresi.k141_724503                            I 4 C 0
s Cacajao_calvus.k141_96166                                 13297 17 +    125063 AAGA-CAA-A--AAG-TCTGAA
i Cacajao_calvus.k141_96166                             I 4 C 0
s Cacajao_hosomi.k141_303789                                15340 17 -    216513 AAGA-CAA-A--AAG-TCTGAA
i Cacajao_hosomi.k141_303789                            I 4 C 0
s Cacajao_melanocephalus.k141_1160263                        7883 17 -    134917 AAGA-CAA-A--AAG-TCTGAA
i Cacajao_melanocephalus.k141_1160263                   I 4 C 0
s Camelus_bactrianus.KN276303.1                           3219808 17 -   8989139 AAGA-TAA-A--AAG-ATTGAA
i Camelus_bactrianus.KN276303.1                         I 4 C 0
s Camelus_dromedarius.KN271192.1                           397509 17 -  15254737 AAGA-TAA-A--AAG-ATTGAA
i Camelus_dromedarius.KN271192.1                        I 4 C 0
s Camelus_ferus.KB016973.1                                2973245 17 +   6889770 AAGA-TAA-A--AAG-ATTGAA
i Camelus_ferus.KB016973.1                              I 4 C 0
s CanFam4.chr31                                          11519717 17 +  39901454 AAAA-TAA-A--AAG-CCTGAG
i CanFam4.chr31                                         I 4 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   14742 17 +     87036 AAAA-TAA-A--AAG-CCTGAG
i Canis_lupus_VD.CanFam_VD_scaffold_16982               I 4 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11266384 17 -  35597290 AAAA-TAA-A--AAG-CCTGAG
i Canis_lupus_dingo.QKWQ01001993.1                      I 4 C 0
s Canis_lupus_familiaris.chr31                           11088918 17 +  39895921 AAAA-TAA-A--AAG-CCTGAG
i Canis_lupus_familiaris.chr31                          I 4 C 0
s Canis_lupus_orion.HG994411.1                           16455933 17 -  44759192 AAAA-TAA-A--AAG-CCTGAG
i Canis_lupus_orion.HG994411.1                          I 4 C 0
s Capra_aegagrus.CM003214.1                              21325446 17 + 157394656 AAGA-TAA-A--AAG-CCTGAA
i Capra_aegagrus.CM003214.1                             I 4 C 0
s Capra_hircus.CM004562.1                               135706674 17 - 157403528 AAGA-TAA-A--AAG-CCTGAA
i Capra_hircus.CM004562.1                               I 4 C 0
s Carlito_syrichta.NW_007248099.1                          309313 17 +    345090 AAGA-TAA-G--AAG-TCTGAA
i Carlito_syrichta.NW_007248099.1                       I 4 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               59767 17 +     67245 AGCA-TAT-C--AAG-CGTGAA
i Carollia_perspicillata.CarPer_scaffold_4436           I 4 C 0
s Castor_canadensis.CasCan_scaffold_47037                   31369  7 +     33760 AAGA-CCA--------------
i Castor_canadensis.CasCan_scaffold_47037               I 4 I 4
s Catagonus_wagneri.CatWag_scaffold_1305                   159130 17 -    276539 AAGA-TAT-A--AAT-CCTGAA
i Catagonus_wagneri.CatWag_scaffold_1305                I 4 C 0
s Cavia_aperea.AVPZ01000278.1                            15786841 17 -  24422027 AAGA-TAA-A--CTC-CCTGAA
i Cavia_aperea.AVPZ01000278.1                           I 4 C 0
s Cavia_porcellus.DS562889.1                             15798777 17 -  24440124 AAGA-TAA-A--CTC-CCTGAA
i Cavia_porcellus.DS562889.1                            I 4 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       176968 17 +    436027 AAGA-TAA-A--CTC-CCTGAA
i Cavia_tschudii.CavTsc_scaffold_488                    I 4 C 0
s Cebus_albifrons.Contig22                               18891114 17 -  29618158 AAGA-CAA-A--AAG-TCTGAA
i Cebus_albifrons.Contig22                              I 4 C 0
s Cebus_olivaceus.k141_93739                                 8658 17 -     26817 AAGA-CAA-A--AAG-TCTGAA
i Cebus_olivaceus.k141_93739                            I 4 C 0
s Cebus_unicolor.k141_239009                                12901 17 +     25043 AAGA-CAA-A--AAG-TCTGAA
i Cebus_unicolor.k141_239009                            I 4 C 0
s Cephalopachus_bancanus.k141_702587                         8341 17 +     21754 AAGA-TAA-G--AAG-TCTGAA
i Cephalopachus_bancanus.k141_702587                    I 4 C 0
s Ceratotherium_simum.JH767818.1                          4364122 18 +   7569818 AAGA-TAA-AA-AAG-CCTGAA
i Ceratotherium_simum.JH767818.1                        I 4 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         3879 18 -      9338 AAGA-TAA-AA-AAG-CCTGAA
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    I 4 C 0
s Cercocebus_atys.KQ010443.1                              6555549 17 +   6739814 AAGA-TAA-A--ATG-TCTGAA
i Cercocebus_atys.KQ010443.1                            I 4 C 0
s Cercocebus_chrysogaster.k141_2328246                      27026 17 +     60454 AAGA-TAA-A--ATG-TCTGAA
i Cercocebus_chrysogaster.k141_2328246                  I 4 C 0
s Cercocebus_lunulatus.k141_4634644                          2232 17 -     21101 AAGA-TAA-A--ATG-TCTGAA
i Cercocebus_lunulatus.k141_4634644                     I 4 C 0
s Cercocebus_torquatus.k141_3969582                         59541 17 -    107033 AAGA-TAA-A--ATG-TCTGAA
i Cercocebus_torquatus.k141_3969582                     I 4 C 0
s Cercopithecus_ascanius.k141_4123525                        2431 17 -     17608 AAGA-TAA-A--ACG-TCTGAA
i Cercopithecus_ascanius.k141_4123525                   I 4 C 0
s Cercopithecus_cephus.k141_598190                          29927 17 +     30494 AAGA-TAA-A--ACG-TCTGAA
i Cercopithecus_cephus.k141_598190                      I 4 C 0
s Cercopithecus_diana.k141_2980617                          58772 17 -     59240 AAGA-TAA-A--ACG-TCTGAA
i Cercopithecus_diana.k141_2980617                      I 4 C 0
s Cercopithecus_hamlyni.k141_129805                          2473 17 +     16677 AAGA-TAA-A--ACG-TCTGAA
i Cercopithecus_hamlyni.k141_129805                     I 4 C 0
s Cercopithecus_lowei.k141_623764                           24632 17 +     35983 AAGA-TAA-A--ACG-TCTGAA
i Cercopithecus_lowei.k141_623764                       I 4 C 0
s Cercopithecus_albogularis.ctg51                              11991158 17 +  12117833 AAGA-TAA-A--ACG-TCTGAA
i Cercopithecus_albogularis.ctg51                             I 4 C 0
s Cercopithecus_mona.ctg12                               46477918 17 +  46592721 AAGA-TAA-A--ACG-TCTGAA
i Cercopithecus_mona.ctg12                              I 4 C 0
s Cercopithecus_neglectus.k141_2078027                      41469 17 -     45581 AAGA-TAA-A--ACG-TCTGAA
i Cercopithecus_neglectus.k141_2078027                  I 4 C 0
s Cercopithecus_nictitans.k141_1129315                       2474 17 +     35577 AAGA-TAA-A--ATG-TCTGAA
i Cercopithecus_nictitans.k141_1129315                  I 4 C 0
s Cercopithecus_petaurista.k141_64532                        2250 17 -     25661 AAGA-TAA-A--ACG-TCTGAA
i Cercopithecus_petaurista.k141_64532                   I 4 C 0
s Cercopithecus_pogonias.k141_3109732                        2229 17 -     17744 AAGA-TAA-A--ACG-TCTGAA
i Cercopithecus_pogonias.k141_3109732                   I 4 C 0
s Cercopithecus_roloway.k141_2263608                        21844 17 +     37128 AAGA-TAA-A--ACG-TCTGAA
i Cercopithecus_roloway.k141_2263608                    I 4 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           3002 16 -      6963 AATA-GAA-A--AAG-ACCAA-
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      I 4 C 0
s Cheirogaleus_major.k141_1157592                           59309 17 -     68416 AATAT-AA-A--AAG-TCAGAA
i Cheirogaleus_major.k141_1157592                       I 4 C 0
s Cheirogaleus_medius.k141_133808                            8354 17 +     13308 AACAT-AA-A--ATG-TTGGAA
i Cheirogaleus_medius.k141_133808                       I 4 C 0
s Cheracebus_lucifer.k141_619653                             5925 17 -     18223 AAGA-CAA-A--AAG-TCTGAA
i Cheracebus_lucifer.k141_619653                        I 4 C 0
s Cheracebus_lugens.k141_203936                             22945 17 +     25473 AAGA-CAA-A--AAG-TCTGAA
i Cheracebus_lugens.k141_203936                         I 4 C 0
s Cheracebus_regulus.k141_2128895                           41983 17 +     57117 AAGA-CAA-A--AAG-TCTGAA
i Cheracebus_regulus.k141_2128895                       I 4 C 0
s Cheracebus_torquatus.k141_315545                          46662 17 +     54541 AAGA-CAA-A--AAG-TCTGAA
i Cheracebus_torquatus.k141_315545                      I 4 C 0
s Chinchilla_lanigera.JH721867.1                         15961984 17 +  43084221 aaga-caa-a--aac-cctgaa
i Chinchilla_lanigera.JH721867.1                        I 4 C 0
s Chiropotes_israelita.k141_1189915                         71469 17 +    196370 AAGA-CAA-A--AAG-TCTGAA
i Chiropotes_israelita.k141_1189915                     I 4 C 0
s Chiropotes_sagulatus.k141_773804                          15649 17 +     40510 AAGA-CAA-A--AAG-TCTGAA
i Chiropotes_sagulatus.k141_773804                      I 4 C 0
s Chlorocebus_aethiops.ctg22                             15139364 17 -  15256731 AAGA-TAA-A--ACG-TCTGAA
i Chlorocebus_aethiops.ctg22                            I 4 C 0
s Chlorocebus_pygerythrus.k141_1486215                      34445 17 -     53260 AAGA-TAA-A--ACG-TCTGAA
i Chlorocebus_pygerythrus.k141_1486215                  I 4 C 0
s Chlorocebus_sabaeus.CM001963.2                        101145005 17 + 101219884 AAGA-TAA-A--ACG-TCTGAA
i Chlorocebus_sabaeus.CM001963.2                        I 4 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                16707 17 -     21363 GAGA-TAA-A--AAG-CCTGAA
i Choloepus_didactylus.ChoDid_scaffold_36182            I 4 C 0
s Choloepus_hoffmanni.KN194586.1                           762010 17 +    964067 GAGA-TAA-A--AAG-CCTGAA
i Choloepus_hoffmanni.KN194586.1                        I 4 C 0
s Colobus_angolensis.KN985967.1                          10886774 17 +  10971483 AAGA-TAA-A--ATG-TCTGAA
i Colobus_angolensis.KN985967.1                         I 4 C 0
s Colobus_guereza.LG08                                  147664939 17 + 156195979 AAGA-TAA-A--ACG-TCTGAA
i Colobus_guereza.LG08                                  I 4 C 0
s Colobus_polykomos.k141_1406057                            16924 17 +     23629 AAGA-TAA-A--ACG-TCTGAA
i Colobus_polykomos.k141_1406057                        I 4 C 0
s Condylura_cristata.JH655880.1                          60613836 17 +  78930452 GTGA-TAA-A--AAG-CCTGAA
i Condylura_cristata.JH655880.1                         I 4 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252          910 17 -      5782 aaga-TGT-C--AAT-CCTGAA
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    I 4 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 278819 17 -    399297 CAGA-TAA-A--GAG-TCTGAG
i Cricetomys_gambianus.CriGam_scaffold_949              I 4 C 0
s Cricetulus_griseus.LT883672.1                          53029480 17 +  72327488 TAGA-TAA-A--GAG-CCTGAG
i Cricetulus_griseus.LT883672.1                         I 4 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            52267 17 -     70449 AAGA-TAA-A--AAG-CCTGAA
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 4 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  208466 17 -    956709 GAGA-TAA-A--AAT-CTTGAA
i Ctenodactylus_gundi.CteGun_scaffold_447               I 4 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                18019 18 +     26546 AACTTTAA-A--ATC-CCTGAA
i Cuniculus_paca.CunPac_flattened_line_16637            I 4 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             59108 17 -    236241 AAGA-TAA-A--AAC-CCTGAA
i Dasyprocta_punctata.DasPun_flattened_line_634         I 4 C 0
s Dasypus_novemcinctus.JH568778.1                          183887 16 -   6883506 GAAA-TAA-A--AAG-CCCCA-
i Dasypus_novemcinctus.JH568778.1                       I 4 C 0
s Daubentonia_madagascariensis.ctg11                     16845161 17 +  31942871 AACAT-AA-A--AAG-TCTGAA
i Daubentonia_madagascariensis.ctg11                    I 4 C 0
s Delphinapterus_leucas.KZ290064.1                       80037064 17 -  96802777 AAGA-TGA-A--AAG-CCTGAA
i Delphinapterus_leucas.KZ290064.1                      I 4 C 0
s Desmodus_rotundus.KZ672188.1                           18699043 17 -  18957592 AACA-CAT-C--AAG-CTTGAA
i Desmodus_rotundus.KZ672188.1                          I 4 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 322771 18 +    993696 AAGA-TAA-AA-AAG-CCTGAA
i Dicerorhinus_sumatrensis.PEKH010003161.1              I 4 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   3425 19 +    151128 AAGA-TAA-AAAAAG-CCTGAA
i Diceros_bicornis.DicBicMic_scaffold_9545              I 4 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   157248 17 +    228994 AAGA-CAA-A--AAC-CCTGAA
i Dinomys_branickii.DinBra_scaffold_1996                I 4 C 0
s Dipodomys_ordii.KN672545.1                              3656557 17 +   4240102 AAGA-TCA-A--GAA-GCTGCA
i Dipodomys_ordii.KN672545.1                            I 4 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 28200 17 +     28912 AAGA-TCA-A--GAA-GCTGCA
i Dipodomys_stephensi.DipSte_scaffold_44365             I 4 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                36336 17 -     73477 AATA-TAG-A--AAC-CCTGAA
i Dolichotis_patagonum.DolPat_scaffold_14102            I 4 C 0
s Echinops_telfairi.JH980316.1                           22998703 15 -  44670279 TAGA---A-A--TGA-TATGAA
i Echinops_telfairi.JH980316.1                          I 4 I 70
s Eidolon_helvum.KE772537.1                                 12501 17 +     24177 AAAA-TAT-C--AAG-CCTGAA
i Eidolon_helvum.KE772537.1                             I 4 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1491721 17 +   1727528 AAGA-TAA-A--AAG-CCTGAA
i Elaphurus_davidianus.JRFZ01086400.1                   I 4 C 0
s Elephantulus_edwardii.JH947210.1                        7816084  4 +  15467074 ------------------caaa
i Elephantulus_edwardii.JH947210.1                      I 13 C 0
s Ellobius_talpinus.LOJH01090055.1                           7140 11 -      7838 TAGG-TAA-A--GAG-------
i Ellobius_talpinus.LOJH01090055.1                      I 4 I 4
s Enhydra_lutris.KZ291749.1                              85872441 17 +  99434291 AAGA-TAA-A--AAG-CCTGAA
i Enhydra_lutris.KZ291749.1                             I 4 C 0
s Eptesicus_fuscus.JH977687.1                             4704410 17 +   6522550 AAGA-TAT-C--AAG-TCTGAA
i Eptesicus_fuscus.JH977687.1                           I 4 C 0
s Equus_asinus.JREZ01000062.1                             5853221 17 -   7175178 AAGA-TAA-A--AAG-Cctgaa
i Equus_asinus.JREZ01000062.1                           I 4 C 0
s Equus_caballus.CM000402.2                              13351726 17 +  41866177 AAGA-TAA-A--AAG-Cctgaa
i Equus_caballus.CM000402.2                             I 4 C 0
s Equus_przewalskii.ATBW01073585.1                          13215 17 +     92910 AAGA-TAA-A--AAG-CCtgaa
i Equus_przewalskii.ATBW01073585.1                      I 4 C 0
s Erinaceus_europaeus.JH835290.1                         11534508  9 +  16010500 ------------AAG-CCTGAA
i Erinaceus_europaeus.JH835290.1                        I 11 C 0
s Erythrocebus_patas.Contig8                             48774132 17 -  48907691 AAGA-TAA-A--ACG-TCTGAA
i Erythrocebus_patas.Contig8                            I 4 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          315282 17 +    330699 AAGA-TGA-A--AAG-CCTGAA
i Eschrichtius_robustus.EscRob_flattened_line_685       I 4 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             61733 17 +     89355 AAGA-TGA-A--AAG-CCTGAA
i Eubalaena_japonica.EubJap_flattened_line_7756         I 4 C 0
s Eulemur_albifrons.k141_715837                              5361 17 +     13586 GACAT-AA-A--AAG-TCGGAA
i Eulemur_albifrons.k141_715837                         I 4 C 0
s Eulemur_collaris.k141_311830                               5292 17 -      6809 GACAT-AA-A--AAG-TCGGAA
i Eulemur_collaris.k141_311830                          I 4 C 0
s Eulemur_coronatus.k141_3240342                            11769 17 +     36558 GACAT-AA-A--AAG-TCGGAA
i Eulemur_coronatus.k141_3240342                        I 4 C 0
s Eulemur_flavifrons.k141_903901                             8090 17 +     60246 AACAT-AA-A--ATG-TCAGAA
i Eulemur_flavifrons.k141_903901                        I 4 C 0
s Eulemur_fulvus.k141_653297                                11566 17 +    109717 GACAT-AA-A--AAT-TCGGAA
i Eulemur_fulvus.k141_653297                            I 4 C 0
s Eulemur_macaco.k141_1341545                               15952 17 +     16540 AACAT-AA-A--ATG-TCAGAA
i Eulemur_macaco.k141_1341545                           I 4 C 0
s Eulemur_mongoz.k141_825972                                16227 17 +     27497 AACAT-AA-A--AAG-TCGGAA
i Eulemur_mongoz.k141_825972                            I 4 C 0
s Eulemur_rubriventer.k141_411740                           18684 17 +     26808 AACAT-AA-A--AAG-TCAGAA
i Eulemur_rubriventer.k141_411740                       I 4 C 0
s Eulemur_rufus.k141_1620292                                33422 17 +     46535 GACAT-AA-A--AAT-TCGGAA
i Eulemur_rufus.k141_1620292                            I 4 C 0
s Eulemur_sanfordi.k141_186399                              16146 17 -     29447 GACAT-AA-A--AAG-TCGGAA
i Eulemur_sanfordi.k141_186399                          I 4 C 0
s Felis_catus.CM001386.2                                129893190 17 - 159252932 AAGA-TAA-A--AAC-CCTGAA
i Felis_catus.CM001386.2                                I 4 C 0
s Felis_catus_fca126.CM031420.1                         129280282 17 - 158578461 AAGA-TAA-A--AAC-CCTGAA
i Felis_catus_fca126.CM031420.1                         I 4 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 21422 17 +     52776 AAGA-TAA-A--AAC-CCTGAA
i Felis_nigripes.FelNig_flattened_line_8080             I 4 C 0
s Galago_moholi.ctg555                                     211185 18 -    847004 GACATTCC-A--CAG-TCAGAA
i Galago_moholi.ctg555                                  I 4 C 0
s Galago_senegalensis.k141_964197                           13559 18 -     43889 GACATTCC-A--CAG-TCAGAA
i Galago_senegalensis.k141_964197                       I 4 C 0
s Galagoides_demidoff.k141_1769638                          10633 18 +     27357 GACCTTCC-A--AAG-TCAGAA
i Galagoides_demidoff.k141_1769638                      I 4 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               156539 17 +    324696 AAGA-TAA-A--AAG-CCTGAA
i Galeopterus_variegatus.GalVar_scaffold_354            I 4 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    181515 17 -    189561 AAGA-TAA-A--AAG-CCTGAA
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 4 C 0
s Glis_glis.GliGli_scaffold_79770                           13321 13 -     18683 AAGA-TGA-A--AAG--T---A
i Glis_glis.GliGli_scaffold_79770                       I 4 C 0
s Gorilla_beringei.k141_111300                               5606 17 -     14630 AAGA-TAA-A--AAG-TCTGAA
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119652706 17 - 195582420 AAGA-TAA-A--AAG-TCTGAA
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   77847 14 +    118900 AAAA-TAA-A--AAC-TT---A
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         2137 17 +     10286 AACAT-AA-A--AAG-TCGGAA
i Hapalemur_alaotrensis.k141_1280836                    I 4 C 0
s Hapalemur_gilberti.k141_279011                              614 17 -     11661 AACAT-AA-A--AAG-TCGGAA
i Hapalemur_gilberti.k141_279011                        I 4 C 0
s Hapalemur_griseus.k141_1387522                             5943 17 +     56096 AACAT-AA-A--AAG-TCGGAA
i Hapalemur_griseus.k141_1387522                        I 4 C 0
s Hapalemur_meridionalis.k141_186231                        29194 17 -     42470 AACAT-AA-A--AAG-TCGGAA
i Hapalemur_meridionalis.k141_186231                    I 4 C 0
s Hapalemur_occidentalis.k141_797938                        45817 17 -     54384 AACAT-AA-A--AAG-TCGGAA
i Hapalemur_occidentalis.k141_797938                    I 4 C 0
s Helogale_parvula.HelPar_flattened_line_22962              17473 17 +     53719 AAGA-TAA-A--AAG-CCTGAA
i Helogale_parvula.HelPar_flattened_line_22962          I 4 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                27730 17 -     91191 AAGA-TAA-A--AAG-CCTGAA
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 4 C 0
s Heterocephalus_glaber.JH602058.1                        2551341 17 +  31725842 aaga-caa-a--aac-actgaa
i Heterocephalus_glaber.JH602058.1                      I 4 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               61094  8 +     73687 -------------AG-TCTGAA
i Heterohyrax_brucei.HetBruBak_scaffold_25354           I 11 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              147368 17 +    277961 AGCA-TAA-A--AAG-CCTGAA
i Hippopotamus_amphibius.HipAmp_scaffold_1308           I 4 C 0
s Hipposideros_armiger.JXIK01001085.1                      278635 17 -    477199 AAGA-TAT-C--AAC-ACTGAA
i Hipposideros_armiger.JXIK01001085.1                   I 4 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              7781 17 -      9143 AAGA-TAT-C--AAC-ACTGAA
i Hipposideros_galeritus.HipGal_scaffold_104691         I 4 C 0
s Hoolock_leuconedys.ctg79                                      5016 17 -   7690867 AAGA-TAA-A--AAG-TCTGAA
i Hoolock_leuconedys.ctg79                                 I 4 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 17542 17 -     67322 AAGA-TAA-A--AAG-CCTGAA
i Hyaena_hyaena.HyaHya_flattened_line_20729             I 4 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19252 17 -    119109 AATA-TAA-A--AAC-TCTAAA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       I 4 C 0
s Hylobates_abbotti.k141_493872                              5441 17 +      5897 AAGA-TAA-A--AAG-TCTGAA
i Hylobates_abbotti.k141_493872                         I 105 C 0
s Hylobates_agilis.k141_1878600                               334 17 -      1230 AAGA-TAA-A--AAG-TCTGAA
i Hylobates_agilis.k141_1878600                         I 4 C 0
s Hylobates_pileatus_b.ContigUN                                 14624987 17 -  25970782 AAGA-TAA-A--AAG-TCTGAA
i Hylobates_pileatus_b.ContigUN                                I 4 C 0
s Hylobates_muelleri.k141_1389047                            2243 17 -      2977 AAGA-TAA-A--AAG-TCTGAA
i Hylobates_muelleri.k141_1389047                       I 4 C 0
s Hylobates_pileatus_a.tarseq_592                             34146 17 -     60944 AAGA-TAA-A--AAG-TCTGAA
i Hylobates_pileatus_a.tarseq_592                         I 4 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     6407 17 +     22540 AAGA-TAA-A--AAC-CCTGAA
i Hystrix_cristata.HysCri_scaffold_50788                I 4 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7126101  7 +  13083262 AAGA-TAA--------------
i Ictidomys_tridecemlineatus.JH393315.1                 I 4 I 6
s Indri_indri.k141_5141390                                    659 17 -      3181 AACAT-AA-A--AAG-TTGGAA
i Indri_indri.k141_5141390                              I 4 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               9269 17 +     17520 AAGA-TGA-A--AAG-CCTGAA
i Inia_geoffrensis.IniGeo_flattened_line_66725          I 4 C 0
s Jaculus_jaculus.JH725517.1                              8566143 15 +  11848649 AAGA-CAG-A--G---ACTGAG
i Jaculus_jaculus.JH725517.1                            I 4 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               23881 17 +     37189 AAGA-TGA-A--AAG-CCTGAA
i Kogia_breviceps.KogBre_flattened_line_35920           I 4 C 0
s Lagothrix_lagothricha.k141_12968                          50500 17 -    147782 AAGA-CAA-A--AAG-TCTGAA
i Lagothrix_lagothricha.k141_12968                      I 4 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   114682 17 -    115756 AAGA-TAT-C--AAG-TCTGAA
i Lasiurus_borealis.LasBor_scaffold_5102                I 4 C 0
s Lemur_catta.scaffold_1                                258407498 17 - 285822530 AACAT-AA-A--AAG-TCGGAA
i Lemur_catta.scaffold_1                                I 4 C 0
s Lepilemur_ankaranensis.k141_884009                        24245 17 +     39228 AACAT-AA-A--AAG-TCAGAA
i Lepilemur_ankaranensis.k141_884009                    I 4 C 0
s Lepilemur_dorsalis.k141_134267                            53629 17 +     63517 AACAT-AA-A--AAG-TCAGAA
i Lepilemur_dorsalis.k141_134267                        I 4 C 0
s Lepilemur_ruficaudatus.k141_617879                        78893 17 +    116806 AGCAT-AA-A--AAG-TCAGAA
i Lepilemur_ruficaudatus.k141_617879                    I 4 C 0
s Lepilemur_septentrionalis.k141_578524                     31884 17 -     33031 AACAT-AA-A--AAG-TCAGAA
i Lepilemur_septentrionalis.k141_578524                 I 4 C 0
s Leptonychotes_weddellii.KB714749.1                      3086234 17 -   3498232 AAGA-TGA-A--AAA-CCTGAA
i Leptonychotes_weddellii.KB714749.1                    I 4 C 0
s Lepus_americanus.LepAme_scaffold_62849                    13508 17 +     22452 GTGA-TAA-A--AA-GCCTGAA
i Lepus_americanus.LepAme_scaffold_62849                I 4 C 0
s Lipotes_vexillifer.KE558548.1                            136225 17 +   3060487 AAGa-tga-a--aag-cctaaa
i Lipotes_vexillifer.KE558548.1                         I 4 C 0
s Lophocebus_aterrimus.ctg55                             19248643 17 +  19376315 AAGA-TAA-A--ATG-TCTGAA
i Lophocebus_aterrimus.ctg55                            I 4 C 0
s Loris_lydekkerianus.k141_550999                           10934 18 +     84689 GACATTAC-A--AAG-TCAGAA
i Loris_lydekkerianus.k141_550999                       I 4 C 0
s Loris_tardigradus.ctg97                                 3778683 18 +   6799190 GACATTAC-A--AAG-TCAGAA
i Loris_tardigradus.ctg97                               I 4 C 0
s Loxodonta_africana.GL010040.1                          20594468  6 -  62548349 AAGG-ta---------------
i Loxodonta_africana.GL010040.1                         I 4 I 7
s Lycaon_pictus.CM007556.1                               11088374 17 +  39895028 AAAA-TAA-A--AAG-CCTGAG
i Lycaon_pictus.CM007556.1                              I 4 C 0
s Macaca_arctoides.k141_2201161                             20378 17 +     74745 AAGA-TAA-A--ACG-TCTGAA
i Macaca_arctoides.k141_2201161                         I 4 C 0
s Macaca_assamensis.Contig65                             12706835 17 +  12821369 AAGA-TAA-A--ACG-TCTGAA
i Macaca_assamensis.Contig65                            I 4 C 0
s Macaca_cyclopis.k119_893486                                2477 17 -      3136 AAGA-TAA-A--ACG-TCTGAA
i Macaca_cyclopis.k119_893486                           I 4 C 0
s Macaca_fascicularis.k141_155037                           47295 17 +     63263 AAGA-TAA-A--ACG-TCTGAA
i Macaca_fascicularis.k141_155037                       I 4 C 0
s Macaca_fuscata.k119_599327                                 2000 17 -      2568 AAGA-TAA-A--ACG-TCTGAA
i Macaca_fuscata.k119_599327                            I 4 C 0
s Macaca_leonina.k141_467472                                 2585 17 -      7381 AAGA-TAA-A--ACG-TCTGAA
i Macaca_leonina.k141_467472                            I 4 C 0
s Macaca_maura.k141_251854                                  45802 17 -     79256 AAGA-TAA-A--ACG-TCTGAA
i Macaca_maura.k141_251854                              I 4 C 0
s Macaca_mulatta.NC_041755.1                            196035909 17 + 196197964 AAGA-TAA-A--ACG-TCTGAA
i Macaca_mulatta.NC_041755.1                            I 4 C 0
s Macaca_nemestrina.KQ004885.1                           11446079 17 +  11645122 AAGA-TAA-A--ACG-TCTGAA
i Macaca_nemestrina.KQ004885.1                          I 4 C 0
s Macaca_nigra.k141_282495                                   4749 17 -     46448 AAGA-TAA-A--ACG-TCTGAA
i Macaca_nigra.k141_282495                              I 4 C 0
s Macaca_radiata.k141_3680256                                2423 17 -     13212 AAGA-TAA-A--ACG-TCTGAA
i Macaca_radiata.k141_3680256                           I 4 C 0
s Macaca_siberu.k141_741907                                 16102 17 -     55006 AAGA-TAA-A--ACG-TCTGAA
i Macaca_siberu.k141_741907                             I 4 C 0
s Macaca_silenus.Contig12                                43841218 17 +  43892939 AAGA-TAA-A--ACG-TCTGAA
i Macaca_silenus.Contig12                               I 4 C 0
s Macaca_thibetana.k99_662710                               17388 17 -     24607 AAGA-TAA-A--ACG-TCTGAA
i Macaca_thibetana.k99_662710                           I 4 C 0
s Macaca_tonkeana.k141_2870633                               4754 17 -     27140 AAGA-TAA-A--ACG-TCTGAA
i Macaca_tonkeana.k141_2870633                          I 4 C 0
s Mandrillus_leucophaeus.scaffold125                     43437803 17 -  43563597 AAGA-TAA-A--ATG-TCTGAA
i Mandrillus_leucophaeus.scaffold125                    I 4 C 0
s Mandrillus_sphinx.Contig144                             4450623 17 -   4543643 AAGA-TAA-A--ATG-TCTGAA
i Mandrillus_sphinx.Contig144                           I 4 C 0
s Manis_javanica.JSZB01003966.1                            146307 17 +    252755 AAGA-TAA-A--AAG-CCTGAA
i Manis_javanica.JSZB01003966.1                         I 4 C 0
s Manis_pentadactyla.KN017078.1                             36450 17 +     58827 AAGA-TAA-A--AAG-CCTGAA
i Manis_pentadactyla.KN017078.1                         I 4 C 0
s Marmota_marmota.CZRN01000005.1                         36873925  7 +  64221397 AAGA-TAA--------------
i Marmota_marmota.CZRN01000005.1                        I 4 I 6
s Megaderma_lyra.MegLyr_scaffold_3562                       64678 17 -    234502 AAGG-TAT-C--AAG-CCTGAA
i Megaderma_lyra.MegLyr_scaffold_3562                   I 4 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             1253 17 -     87323 AAGA-TAA-A--AAG-CCTGAA
i Mellivora_capensis.MelCap_flattened_line_15433        I 4 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               12979 16 +     15977 TAAA--AA-A--GAG-CTAGAG
i Meriones_unguiculatus.MerUng_scaffold_52233           I 4 C 0
s Mesocricetus_auratus.KB708139.1                         1047189  1 -  26018355 C---------------------
i Mesocricetus_auratus.KB708139.1                       I 4 C 0
s Mesoplodon_bidens.MesBid_scaffold_227248                    557 17 -      1377 AAGA-TGA-A--AAG-CCTGAA
i Mesoplodon_bidens.MesBid_scaffold_227248              I 4 C 0
s Microcebus_murinus.CM007691.1                          16510519 17 +  47401472 AACAT-AA-A--AAG-TGAGAA
i Microcebus_murinus.CM007691.1                         I 4 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  34705 15 -     48017 TAGA---A-A--TGA-TATGAA
i Microgale_talazaci.MicTal_scaffold_34660              I 4 I 71
s Micronycteris_hirsuta.MicHir_scaffold_37978               22952 17 -     32043 AACA-TAT-C--AAG-CCTGAA
i Micronycteris_hirsuta.MicHir_scaffold_37978           I 4 C 0
s Microtus_ochrogaster.CM001673.1                        22820330 11 -  98408828 TAGG-TAA-A--GAG-------
i Microtus_ochrogaster.CM001673.1                       I 5 I 4
s Miniopterus_natalensis.LDJU01000022.1                   8209929 17 +  10048721 AAGA-TGT-C--AAC-CCTGAA
i Miniopterus_natalensis.LDJU01000022.1                 I 4 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            34583 17 +     45743 AAGA-TAT-C--AAC-CCTGAA
i Miniopterus_schreibersii.MinSch_scaffold_24116        I 4 C 0
s Miopithecus_ogouensis.k141_2935907                         2352 17 +     29742 AAGA-TAA-A--ACG-TCTGAA
i Miopithecus_ogouensis.k141_2935907                    I 4 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        11750 17 -    104932 AAGA-TGA-A--AAA-CCTGAA
i Mirounga_angustirostris.MirAng_flattened_line_8852    I 4 C 0
s Mirza_zaza.k141_226143                                     5908 17 +      8497 AACAT-AA-A--AAG-TTGGAA
i Mirza_zaza.k141_226143                                I 4 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 146654 17 +    154973 AAGA-TGA-A--AAG-CCTGAA
i Monodon_monoceros.MonMon_M_scaffold_5598              I 4 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                161470 17 +    265003 AAGA-TAT-C--AAG-CTAGAA
i Mormoops_blainvillei.MorMeg_scaffold_2952             I 4 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  1745 17 -     19904 AAGA-TAT-A--AAG-CCTGAA
i Moschus_moschiferus.MosMos_scaffold_78805             I 4 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  145168 17 -    168139 AAGA-TAA-A--AAG-CCTGAA
i Mungos_mungo.MunMun_flattened_line_8729               I 4 C 0
s Murina_feae.MurFea_scaffold_2254                          19780 17 -    100666 AAGA-TAT-C--AAG-TCTGAA
i Murina_feae.MurFea_scaffold_2254                      I 4 C 0
s Mus_caroli.LT608236.1                                  70766822 12 +  92629107 T-----A--A--GAG-CCTGAG
i Mus_caroli.LT608236.1                                 I 4 C 0
s Mus_musculus.chr16                                     75489882 12 +  98207768 T-----A--A--GAg-cctgag
i Mus_musculus.chr16                                    I 4 C 0
s Mus_pahari.LT608305.1                                  67556115 13 +  89017189 T-----AA-A--GAG-CCTGAG
i Mus_pahari.LT608305.1                                 I 4 C 0
s Mus_spretus.CM004110.1                                 74331058 12 +  97876770 T-----A--A--GAG-CCTGAG
i Mus_spretus.CM004110.1                                I 4 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             12078 14 +     98495 AGGA-TAA-A--AAG-CT---A
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 4 C 0
s Mustela_putorius.JH417978.1                             4424622 17 -  28371801 AAGA-TAA-A--AAG-CCTGAA
i Mustela_putorius.JH417978.1                           I 4 C 0
s Myotis_brandtii.KE161952.1                               968091 17 +   8389877 AAGA-TAT-C--AAG-TCTGAA
i Myotis_brandtii.KE161952.1                            I 4 C 0
s Myotis_davidii.KB114863.1                               5019764 17 +   6462685 AAGA-TAT-C--AAG-TCTGAA
i Myotis_davidii.KB114863.1                             I 4 C 0
s Myotis_lucifugus.GL429887.1                             3465673 17 -   3747815 AAGA-TAT-C--AAG-TCTGAA
i Myotis_lucifugus.GL429887.1                           I 4 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        10883 17 +     66751 AAGA-TAT-C--AAG-TCTGAA
i Myotis_myotis.MyoMyo_scaffold_6123                    I 4 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             5276 17 -      8794 GAGA-TAA-A--AAG-CATAAA
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        I 4 C 0
s Nannospalax_galili.KL201303.1                            118929 17 +    362372 AAGG-CAG-A--GAG-CTTGAG
i Nannospalax_galili.KL201303.1                         I 4 C 0
s Nasalis_larvatus.k141_153429                               8859 17 +     48152 AAGA-TAA-A--ACG-TCTGAA
i Nasalis_larvatus.k141_153429                          I 4 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4485141 17 -  14209539 AAGA-TGA-A--AAA-CCTGAA
i Neomonachus_schauinslandi.NINY01007774.1              I 4 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3951266 17 -   4490290 AAGA-TGA-A--AAG-CCTGAA
i Neophocaena_asiaeorientalis.KZ688543.1                I 4 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  49971  1 +     94413 ---------------------A
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_720788                             241 17 -      1065 AAGA-TAA-A--AAG-TCTGAA
i Nomascus_annamensis.k141_720788                       I 4 C 0
s Nomascus_concolor.k141_226614                              1545 17 -      5092 AAGA-TAA-A--AAG-TCTGAA
i Nomascus_concolor.k141_226614                         I 4 C 0
s Nomascus_gabriellae.k141_39679                              516 17 -     17937 AAGA-TAA-A--AAG-TCTGAA
i Nomascus_gabriellae.k141_39679                        I 4 C 0
s Nomascus_siki_b.tarseq_80                             25263 17 -  18771707 AAGA-TAA-A--AAG-TCTGAA
i Nomascus_siki_b.tarseq_80                         I 4 C 0
s Nomascus_siki_a.k141_595747                                  2966 17 +      4512 AAGA-TAA-A--AAG-TCTGAA
i Nomascus_siki_a.k141_595747                             I 4 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                31175 16 +   3668941 AAGA-TAA-A--A-G-CCTGAG
i Nyctereutes_procyonoides.CAJHUB010000786.1            I 4 C 0
s Nycticebus_bengalensis.LG16                            65567378 18 -  95554990 GACATTAC-A--AAG-TCAGAA
i Nycticebus_bengalensis.LG16                           I 4 C 0
s Nycticebus_coucang.k141_2051882                            4104 18 +      6470 GACATTAC-A--AAG-TCAGAA
i Nycticebus_coucang.k141_2051882                       I 4 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65669713 18 +  89412551 GACATTAC-A--AAG-TCAGAA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     I 4 C 0
s Ochotona_princeps.JH802095.1                            4996256 16 -  23139505 AATG-TAA-A--AG--CCTGGA
i Ochotona_princeps.JH802095.1                          I 4 C 0
s Odobenus_rosmarus.KB229369.1                             679807 17 -   3126709 AAGA-TGA-A--AAA-CCTGAA
i Odobenus_rosmarus.KB229369.1                          I 4 C 0
s Odocoileus_virginianus.KZ101650.1                       1079951 17 +   1425656 AAGA-TAA-A--AAG-CCTGAA
i Odocoileus_virginianus.KZ101650.1                     I 4 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         37243 17 +     78940 AAGA-TGA-A--AAG-CCTGAA
i Okapia_johnstoni.LVCL01S0017931.1                     I 4 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  125583 11 +    145789 TACG-TAA-A--GAG-------
i Ondatra_zibethicus.OndZib_scaffold_6821               I 4 I 4
s Onychomys_torridus.OnyTor_scaffold_12578                  37369 17 +     62360 TAGG-TAA-A--GAG-CCTGAG
i Onychomys_torridus.OnyTor_scaffold_12578              I 4 C 0
s Orcinus_orca.KB316965.1                                 7224951 17 -   7562323 AAGA-TAA-A--AAG-CCTGAA
i Orcinus_orca.KB316965.1                               I 4 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              57760 17 -     66828 AAGA-TAA-A--CAG-TCTGAA
i Orycteropus_afer.OryAfe_flattened_line_13509          I 4 C 0
s Oryctolagus_cuniculus.CM000803.1                      141876542 17 + 163896628 GCGA-TAA-A--AA-GCCCGAA
i Oryctolagus_cuniculus.CM000803.1                      I 4 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      308458 17 -    505867 AAGA-TAA-A--AAG-CCTGAG
i Otocyon_megalotis.JAEUCK010005121.1                   I 4 C 0
s Otolemur_crassicaudatus.k141_505435                        1003 18 -     53940 GACATTCC-A--AAG-TCAGAA
i Otolemur_crassicaudatus.k141_505435                   I 4 C 0
s Otolemur_garnettii.GL873528.1                          18008983 18 -  38779656 GACATTCC-A--AAG-TCAGAA
i Otolemur_garnettii.GL873528.1                         I 4 C 0
s Ovis_aries.CM001582.2                                 134077521 17 - 275406953 AAGA-TAA-A--AAG-CCTGAA
i Ovis_aries.CM001582.2                                 I 4 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      78736 17 +    140051 AAGA-TAA-A--AAG-CCTGAA
i Ovis_canadensis.OviCan_scaffold_6251                  I 4 C 0
s Pan_paniscus.AJFE02002857.1                                 656 17 -      1091 AAGA-TAA-A--AAG-TCTGAA
i Pan_paniscus.AJFE02002857.1                           C 0 C 0
s Pan_troglodytes.CM009241.2                            120152126 17 - 196562556 AAGA-TAA-A--AAG-TCTGAA
i Pan_troglodytes.CM009241.2                            I 4 I 14
s Panthera_onca.PanOnc_flattened_line_1615                  34583 17 +    295523 AAGA-TAA-A--AAC-CCTGAA
i Panthera_onca.PanOnc_flattened_line_1615              I 4 C 0
s Panthera_pardus.KV860323.1                              3638317 17 +  18214204 AAGA-TAA-A--AAC-CCTGAA
i Panthera_pardus.KV860323.1                            I 4 C 0
s Panthera_tigris.KE721879.1                              5027992 17 -   6340057 AAGA-TAA-A--AAC-CCTGAA
i Panthera_tigris.KE721879.1                            I 4 C 0
s Pantholops_hodgsonii.KE114631.1                         1066371 17 -   1292953 AAGA-TAA-A--AAG-CCTGAA
i Pantholops_hodgsonii.KE114631.1                       I 4 C 0
s Papio_anubis.CM001492.2                               188156590 17 - 188283584 AAGA-TAA-A--ATG-TCTGAA
i Papio_anubis.CM001492.2                               I 4 C 0
s Papio_cynocephalus.k141_883042                             4907 17 +      5367 AAGA-TAA-A--ATG-TCTGAA
i Papio_cynocephalus.k141_883042                        I 4 C 0
s Papio_hamadryas.Contig15                               47513975 17 +  47705337 AAGA-TAA-A--ATG-TCTGAA
i Papio_hamadryas.Contig15                              I 4 C 0
s Papio_kindae.k141_5458022                                 67951 17 -    104429 AAGA-TAA-A--ATG-TCTGAA
i Papio_kindae.k141_5458022                             I 4 C 0
s Papio_papio.k141_979496                                    6487 17 +     14967 AAGA-TAA-A--ATG-TCTGAA
i Papio_papio.k141_979496                               I 4 C 0
s Papio_ursinus.k141_1345919                                 2346 17 -      7628 AAGA-TAA-A--ATG-TCTGAA
i Papio_ursinus.k141_1345919                            I 4 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    116045 17 -    135482 AAGA-TAA-A--AAG-CCTGAA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 I 4 C 0
s Perodicticus_ibeanus.k141_117958                           5694 18 -     23713 GACACTAC-A--ACG-TCAGAA
i Perodicticus_ibeanus.k141_117958                      I 4 C 0
s Perodicticus_potto.k141_713187                            25007 18 -     27972 GACACTAC-A--AAG-TCAGAA
i Perodicticus_potto.k141_713187                        I 4 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      44840 15 -     45160 AAAA---A-A--GAA-GCTGCA
i Perognathus_longimembris.PerPac_flattened_line_22291  I 4 C 0
s Peromyscus_maniculatus.KI615518.1                       4950620 17 -   8017169 TAGA-TAA-A--GAG-CCCGAG
i Peromyscus_maniculatus.KI615518.1                     I 4 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    12693 17 -     36578 AAGA-TAA-A--ATC-TCTGAA
i Petromus_typicus.PetTyp_scaffold_33007                I 4 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            121556 17 -    122454 AAGA-TGA-A--AAG-CCTGAA
i Phocoena_phocoena.PhoPho_flattened_line_11948         I 4 C 0
s Piliocolobus_badius.k141_1987485                           2373 17 -      5908 AAGA-TAA-A--ACG-TCTGAA
i Piliocolobus_badius.k141_1987485                      I 4 C 0
s Piliocolobus_gordonorum.k141_1270531                       2997 17 -     17985 AAGA-TAA-A--ACG-TCTGAA
i Piliocolobus_gordonorum.k141_1270531                  I 4 C 0
s Piliocolobus_kirkii.k141_929665                            2364 17 +      7694 AAGA-TAA-A--ACG-TCTGAA
i Piliocolobus_kirkii.k141_929665                       I 4 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26740842 17 +  26888534 AAGA-TAA-A--ACG-TCTGAA
i Piliocolobus_tephrosceles.PDMG02000036.1              I 4 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            97708 17 +    112873 AAGA-TAT-C--AAG-TCTGAA
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        I 4 C 0
s Pithecia_albicans.k141_991845                             44106 17 -     61926 AAGA-CAA-A--AAG-TCTGAA
i Pithecia_albicans.k141_991845                         I 4 C 0
s Pithecia_chrysocephala.k141_159118                        25491 17 +     78826 AAGA-CAA-A--AAG-TCTGAA
i Pithecia_chrysocephala.k141_159118                    I 4 C 0
s Pithecia_hirsuta.k141_1152968                              9538 17 -     15800 AAGA-CAA-A--AAG-TCTGAA
i Pithecia_hirsuta.k141_1152968                         I 4 C 0
s Pithecia_mittermeieri.k141_2119203                        12737 17 -     16101 AAGA-CAA-A--AAG-TCTGAA
i Pithecia_mittermeieri.k141_2119203                    I 4 C 0
s Pithecia_pissinattii.k141_1102319                          5965 17 +      9673 AAGA-CAA-A--AAG-TCTGAA
i Pithecia_pissinattii.k141_1102319                     I 4 C 0
s Pithecia_pithecia.tarseq_313                           13474965 17 -  19735023 AAGA-CAA-A--AAG-TCTGAA
i Pithecia_pithecia.tarseq_313                          I 4 C 0
s Pithecia_vanzolinii.k141_831006                           13868 17 -     31692 AAGA-CAA-A--AAG-TCTGAA
i Pithecia_vanzolinii.k141_831006                       I 4 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           5642 17 +     21690 AAGA-TGA-A--AAG-ACTGAA
i Platanista_gangetica.PlaMin_flattened_line_72990      I 4 C 0
s Plecturocebus_bernhardi.k141_959214                       23208 17 +     44506 AAGA-CAA-A--AAG-TCTGAA
i Plecturocebus_bernhardi.k141_959214                   I 4 C 0
s Plecturocebus_brunneus.k141_498086                        23420 17 +     67491 AAGA-CAA-A--AAG-TCTGAA
i Plecturocebus_brunneus.k141_498086                    I 4 C 0
s Plecturocebus_caligatus.k141_2539816                      13660 17 -     98129 AAGA-CAA-A--AAG-TCTGAA
i Plecturocebus_caligatus.k141_2539816                  I 4 C 0
s Plecturocebus_cinerascens.k141_744510                     23260 17 +    147771 AAGA-CAA-A--AAG-TCTGAA
i Plecturocebus_cinerascens.k141_744510                 I 4 C 0
s Plecturocebus_cupreus.k141_1223294                        23517 17 -     23762 AAGA-CAA-A--AAG-TCTGAA
i Plecturocebus_cupreus.k141_1223294                    I 4 C 0
s Plecturocebus_dubius.k141_3565563                          3979 17 -     55515 AAGA-CAA-A--AAG-TCTGAA
i Plecturocebus_dubius.k141_3565563                     I 4 C 0
s Plecturocebus_grovesi.k141_242819                         23333 17 +    152463 AAGA-CAA-A--AAG-TCTGAA
i Plecturocebus_grovesi.k141_242819                     I 4 C 0
s Plecturocebus_hoffmannsi.k141_985533                       1050 17 -    119457 AAGA-CAA-A--AAG-TCTGAA
i Plecturocebus_hoffmannsi.k141_985533                  I 4 C 0
s Plecturocebus_miltoni.k141_841561                         13056 17 +    134592 AAGA-CAA-A--AAG-TCTGAA
i Plecturocebus_miltoni.k141_841561                     I 4 C 0
s Plecturocebus_moloch.k141_890597                          23643 17 -     75465 AAGA-CAA-A--AAG-TCTGAA
i Plecturocebus_moloch.k141_890597                      I 4 C 0
s Pongo_abelii.NDHI03003816.1                              187492 17 -    373494 AAGA-TAA-A--AAG-TCTGAA
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19808140 17 +  19899266 AAGA-TAA-A--AAG-TCTGAA
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               6103 17 -     15069 AAGA-TAA-A--ACG-TCTGAA
i Presbytis_comata.k141_672698                          I 4 C 0
s Presbytis_mitrata.k141_860013                              6233 17 +     14865 AAGA-TAA-A--ACG-TCTGAA
i Presbytis_mitrata.k141_860013                         I 4 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                2204  8 -      9567 -------------AG-TCTGAA
i Procavia_capensis.ProCapCap_scaffold_149274           I 11 C 0
s Prolemur_simus.MPIZ01000048.1                           6848875 17 +  12164890 AACat-aa-a--aag-tcagaa
i Prolemur_simus.MPIZ01000048.1                         I 4 C 0
s Propithecus_coquerelli.NW_012147863.1                     17184 17 -     30946 AACat-aa-g--aag-ttggaa
i Propithecus_coquerelli.NW_012147863.1                 I 4 T 637
s Propithecus_coronatus.k141_1353159                         3941 17 +     11805 AACAT-AA-A--AAG-TTGGAA
i Propithecus_coronatus.k141_1353159                    I 4 C 0
s Propithecus_diadema.k141_577245                           43284 17 +     52369 AACAT-AA-G--AAG-TTGGTA
i Propithecus_diadema.k141_577245                       I 4 C 0
s Propithecus_edwardsi.k141_1317105                         35671 17 -     44753 AACAT-AA-G--AAG-TTGGAA
i Propithecus_edwardsi.k141_1317105                     I 4 C 0
s Propithecus_perrieri.k141_7554                            17595 17 +     27322 AACAT-AA-G--AAG-TTGGTA
i Propithecus_perrieri.k141_7554                        I 4 C 0
s Propithecus_tattersalli.k141_907138                       17231 17 -     53241 AACAT-AA-G--AAG-TTGGAA
i Propithecus_tattersalli.k141_907138                   I 4 C 0
s Propithecus_verreauxi.k141_158021                         39495 17 -     48185 AACAT-AA-G--AAG-TTGGAA
i Propithecus_verreauxi.k141_158021                     I 4 C 0
s Psammomys_obesus.NESX01026517.1                           34527 17 +     77221 TAAA-TAA-A--GAA-CTGGAG
i Psammomys_obesus.NESX01026517.1                       I 4 C 0
s Pteronotus_parnellii.KE867983.1                            4115 17 -     27784 AAGA-GGT-C--AAC-CCTGAA
i Pteronotus_parnellii.KE867983.1                       I 4 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        246932 17 -    344369 AAGA-TAA-A--AAG-CCCGAA
i Pteronura_brasiliensis.PteBra_flattened_line_1343     I 4 C 0
s Pteropus_alecto.KB031157.1                             13246232 17 -  17261082 AAAA-TAT-C--AAG-ACTGAA
i Pteropus_alecto.KB031157.1                            I 4 C 0
s Pteropus_vampyrus.KN525959.1                             604183 17 -   3946241 AAAA-TAT-C--AAG-ACTGAA
i Pteropus_vampyrus.KN525959.1                          I 4 C 0
s Puma_concolor.QAVW01000427.1                          131534570 17 - 161321710 AAGA-TAA-A--AAC-CCTGAA
i Puma_concolor.QAVW01000427.1                          I 4 C 0
s Pygathrix_cinerea.k141_374971                             30224 17 +     56732 AAGA-TAA-A--ACG-TCTGAA
i Pygathrix_cinerea.k141_374971                         I 4 C 0
s Pygathrix_nigripes_b.ctg79                                 6806712 17 +   6970761 AAGA-TAA-A--ACG-TCTGAA
i Pygathrix_nigripes_b.ctg79                               I 4 C 0
s Pygathrix_nigripes_a.k141_101123                             6103 17 +     18040 AAGA-TAA-A--ACG-TCTGAA
i Pygathrix_nigripes_a.k141_101123                        I 4 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                16030 17 +     68503 AAGA-TAA-A--AAG-CCTGAA
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 4 C 0
s Rattus_norvegicus.chr11                                13915824 13 +  90463843 C-----AG-A--GAG-CCTGAG
i Rattus_norvegicus.chr11                               I 4 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1788059 17 +   2252614 AAGC-TAT-C--AAG-ACTGAA
i Rhinolophus_sinicus.LVEH01000179.1                    I 4 C 0
s Rhinopithecus_bieti.k119_554384                             515 17 -     17045 AAGA-TAA-A--ACG-TCTGAA
i Rhinopithecus_bieti.k119_554384                       I 4 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206377992 17 - 206558726 AAGA-TAA-A--ACG-TCTGAA
i Rhinopithecus_roxellana.NC_044549.1                   I 4 C 0
s Rhinopithecus_strykeri.ctg4                            44856906 17 -  45163003 AAGA-TAA-A--ACA-TCTGAA
i Rhinopithecus_strykeri.ctg4                           I 4 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                19566 17 +    109198 AACA-TAT-C--AAG-CCCGAA
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            I 4 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       8197 17 +     12214 AAGA-TAA-A--AAG-CCTGAA
i Saiga_tatarica.SaiTat_scaffold_82192                  I 4 C 0
s Saimiri_boliviensis.NW_024100938.1                     15673070 17 -  43202129 AAGA-TAA-G--AAG-TCTGAA
i Saimiri_boliviensis.NW_024100938.1                    I 4 C 0
s Saimiri_cassiquiarensis.k141_808270                        4983 17 +     34089 AAGA-TAA-A--AAG-TCTGAA
i Saimiri_cassiquiarensis.k141_808270                   I 4 C 0
s Saimiri_macrodon.k141_2087127                              4925 17 -     60842 AAGA-TAA-A--AAG-TCTGAA
i Saimiri_macrodon.k141_2087127                         I 4 C 0
s Saimiri_oerstedii.k141_841116                              5018 17 +     67014 AAGA-TAA-A--AAG-TCTGAA
i Saimiri_oerstedii.k141_841116                         I 4 C 0
s Saimiri_sciureus.k141_1947592                              4996 17 +     60816 AAGA-TAA-A--AAG-TCTGAA
i Saimiri_sciureus.k141_1947592                         I 4 C 0
s Saimiri_ustus.k141_1282476                                 4933 17 -     76454 AAGA-TAA-A--AAG-TCTGAA
i Saimiri_ustus.k141_1282476                            I 4 C 0
s Sapajus_apella.ctg10                                   17341658 17 -  30362882 AAGA-TAA-A--AAG-TCTGAA
i Sapajus_apella.ctg10                                  I 4 C 0
s Sapajus_macrocephalus.k141_966464                         21019 17 -     62485 AAGA-TAA-A--AAG-TCTGAA
i Sapajus_macrocephalus.k141_966464                     I 4 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   32537 17 -    114521 ATGA-TAA-A--AAG-CCTGAA
i Scalopus_aquaticus.ScaAqu_scaffold_9300               I 4 C 0
s Semnopithecus_entellus.k141_1572367                        3716 17 +     15331 AAGA-TAA-A--ACA-TCTGAA
i Semnopithecus_entellus.k141_1572367                   I 4 C 0
s Semnopithecus_hypoleucos.k141_761524                       9109 17 +     20762 AAGA-TAA-A--ACA-TCTGAA
i Semnopithecus_hypoleucos.k141_761524                  I 4 C 0
s Semnopithecus_johnii.k141_785014                         119112 17 +    130994 AAGA-TAA-A--ACA-TCTGAA
i Semnopithecus_johnii.k141_785014                      I 4 C 0
s Semnopithecus_priam.k141_410937                           37898 17 +     46263 AAGA-TAA-A--ACA-TCTGAA
i Semnopithecus_priam.k141_410937                       I 4 C 0
s Semnopithecus_schistaceus.k141_387461                     31018 17 +     42640 AAGA-TAA-A--ACA-TCTGAA
i Semnopithecus_schistaceus.k141_387461                 I 4 C 0
s Semnopithecus_vetulus.k141_1143185                        14058 17 +     30600 AAGA-TAA-A--ACT-TCTGAA
i Semnopithecus_vetulus.k141_1143185                    I 4 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  100568 17 -    120886 TAGG-TAA-A--GAG-CCTGAG
i Sigmodon_hispidus.SigHis_scaffold_11332               I 4 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            19120 18 +    739146 AAGA-TAA-A-GAAG-TCTAAA
i Solenodon_paradoxus.SolPar_flattened_line_1012        I 4 C 0
s Sorex_araneus.JH798170.1                               17766317 17 -  27805282 aaaa-caa-a--aaa-cctaaa
i Sorex_araneus.JH798170.1                              I 716 C 0
s Spermophilus_dauricus.KZ294190.1                        2240017  7 +   2842873 AAGA-TAA--------------
i Spermophilus_dauricus.KZ294190.1                      I 4 I 6
s Spilogale_gracilis.SpiGra_flattened_line_905             235052 16 -    276980 AAGA--AA-A--AAG-CCTGAA
i Spilogale_gracilis.SpiGra_flattened_line_905          I 4 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            27828 17 +     62062 AAGA-TAA-A--AAG-CCTGAA
i Suricata_suricatta.SurSur_flattened_line_20339        I 4 C 0
s Sus_scrofa.CM000824.4                                 189272108 17 + 218635234 AAGA-TAT-A--AAT-CCTGAA
i Sus_scrofa.CM000824.4                                 I 4 C 0
s Symphalangus_syndactylus.tarseq_24                        15248 17 -  13920577 AAGA-TAA-A--AAG-TCTGAA
i Symphalangus_syndactylus.tarseq_24                    I 4 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                 494 17 +     20549 AAGA-TGT-C--TAC-CCTGAA
i Tadarida_brasiliensis.TadBra_scaffold_61492           I 4 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               14940 17 +     45698 GAGA-TAA-A--AAG-CATGAA
i Tamandua_tetradactyla.TamTet_scaffold_26877           I 4 C 0
s Tapirus_indicus.TapInd_scaffold_176                      807361 17 +   1148477 AAGA-TAA-A--AAG-CCTGAA
i Tapirus_indicus.TapInd_scaffold_176                   I 4 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  58072 17 +     99546 AAGA-TAA-A--AAG-CCTGAA
i Tapirus_terrestris.TapTer_scaffold_14939              I 4 C 0
s Tarsius_lariang.k141_609102                               26787 17 +     42269 AAGA-TAA-G--AAG-TCTGAA
i Tarsius_lariang.k141_609102                           I 4 C 0
s Tarsius_wallacei.k141_48636                               60103 17 +     65473 AAGA-TAA-G--AAG-TCTGAA
i Tarsius_wallacei.k141_48636                           I 4 C 0
s Theropithecus_gelada.CM009951.1                       194008112 17 - 194193292 AAGA-TAA-A--ATG-TCTGAA
i Theropithecus_gelada.CM009951.1                       I 4 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             38964 10 -     47444 ---------A--AAC-CCTGAA
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  5760 17 +      6782 GATA-TAAAA--AAG-ACCAA-
i Tolypeutes_matacus.TolMat_scaffold_269431             I 4 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  136112 17 -    259118 AACA-TAT-C--AAG-CCAGAA
i Tonatia_saurophila.TonSau_scaffold_3334               I 4 C 0
s Trachypithecus_auratus.k141_738098                        27214 17 +     38948 AAGA-TAA-A--ACA-TCTTGA
i Trachypithecus_auratus.k141_738098                    I 4 C 0
s Trachypithecus_crepusculus.k141_1588528                   20946 17 -     32910 AAGA-TAA-A--ACA-TCTGAA
i Trachypithecus_crepusculus.k141_1588528               I 4 C 0
s Trachypithecus_cristatus.k141_1011511                      2332 17 -     12939 AAGA-TAA-A--ACA-TCTTGA
i Trachypithecus_cristatus.k141_1011511                 I 4 C 0
s Trachypithecus_francoisi.k141_768164                       2268 17 -     14244 AAGA-TAA-A--ACA-TCTGAA
i Trachypithecus_francoisi.k141_768164                  I 4 C 0
s Trachypithecus_geei.k141_670367                           43667 17 -     54611 AAGA-TAA-A--ACT-TCTGAA
i Trachypithecus_geei.k141_670367                       I 4 C 0
s Trachypithecus_germaini.k141_868450                        1470 17 -     11566 AAGA-TAA-A--ACA-TCTTGA
i Trachypithecus_germaini.k141_868450                   I 4 C 0
s Trachypithecus_hatinhensis.k141_504423                     3647 17 -     15592 AAGA-TAA-A--ACA-TCTGAA
i Trachypithecus_hatinhensis.k141_504423                I 4 C 0
s Trachypithecus_laotum.k141_760702                          2303 17 +     14371 AAGA-TAA-A--ACA-TCTGAA
i Trachypithecus_laotum.k141_760702                     I 4 C 0
s Trachypithecus_leucocephalus.k141_381681                    584 17 +     12481 AAGA-TAA-A--ACA-TCTGAA
i Trachypithecus_leucocephalus.k141_381681              I 4 C 0
s Trachypithecus_melamera.k141_699241                         460 17 -     24393 AAGA-TAA-A--ACA-TCTGAA
i Trachypithecus_melamera.k141_699241                   I 4 C 0
s Trachypithecus_obscurus.k141_1115109                       5706 17 -     28054 AAGA-TAA-A--ACA-TCTGAA
i Trachypithecus_obscurus.k141_1115109                  I 4 C 0
s Trachypithecus_phayrei.ctg3                            44660506 17 -  44834318 AAGA-TAA-A--ACA-TCTGAA
i Trachypithecus_phayrei.ctg3                           I 4 C 0
s Trachypithecus_pileatus.k141_1022309                       2814 17 +     13828 GAGA-TAA-A--ACA-TCTGAA
i Trachypithecus_pileatus.k141_1022309                  I 4 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   5423 17 +     90398 AAGA-TAA-A--TAG-CCTGAA
i Tragulus_javanicus.TraJav_scaffold_14717              I 4 C 0
s Trichechus_manatus.JH594618.1                          16085150  8 +  31416278 -------------AG-TCTGAA
i Trichechus_manatus.JH594618.1                         I 13 C 0
s Tupaia_chinensis.KB320831.1                             2793156 17 -   3938065 AAGA-CAA-A--AGG-CTGGAA
i Tupaia_chinensis.KB320831.1                           I 2 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    5356 17 +     13056 AAGA-CAA-A--AGG-CTGGAA
i Tupaia_tana.TupTan_flattened_line_68454               I 2 C 0
s Tursiops_truncatus.MRVK01000923.1                      69313667 17 -  96451834 AAGA-TGA-A--AAG-CCTGAA
i Tursiops_truncatus.MRVK01000923.1                     I 4 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   1569 17 +     10241 GTGA-TAA-A--AAG-CCTGAA
i Uropsilus_gracilis.UroGra_scaffold_69449              I 4 C 0
s Ursus_maritimus.KK498671.1                              6515061 17 +  28682327 AAGA-TAA-A--AAG-CCTGAA
i Ursus_maritimus.KK498671.1                            I 4 C 0
s Varecia_rubra.k141_432109                                  5572 17 -     20643 AACAT-AA-A--AAG-TCGGAA
i Varecia_rubra.k141_432109                             I 4 C 0
s Varecia_variegata.k141_775891                             25113 17 -     33872 AACAT-AA-A--AAG-TCGGAA
i Varecia_variegata.k141_775891                         I 4 C 0
s Vicugna_pacos.KN269600.1                                1524913 17 -   2331223 AAGA-TAA-A--AAG-ATTGAA
i Vicugna_pacos.KN269600.1                              I 4 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                138555 17 -    281493 AAGA-TAA-A--AAG-CCTGAG
i Vulpes_lagopus.VulLag_flattened_line_2045             I 4 C 0
s Xerus_inauris.XerIna_scaffold_7898                       127131  7 -    134049 AAGA-TAA--------------
i Xerus_inauris.XerIna_scaffold_7898                    I 4 I 6
s Zalophus_californianus.ZalCal_flattened_line_4097        214534 17 -    227762 AAGA-TGA-A--AAA-CCTGAA
i Zalophus_californianus.ZalCal_flattened_line_4097     I 4 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     15456 10 -     20485 ACGA-TGG-A--G---A-----
i Zapus_hudsonius.ZapHud_scaffold_64392                 I 4 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           7166 17 -      8775 AAGA-TGA-A--AAG-CCTGAA
i Ziphius_cavirostris.ZipCav_flattened_line_127025      I 4 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                701732 90 +    802869 I
e Crocidura_indochinensis.CroInd_scaffold_848148              199  0 +      1327 C
e Hylobates_klossii.k141_285563                               343 193 +      1026 I
e Octodon_degus.JH651621.1                                3685767  0 +  10294119 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     90228  0 -    117718 C
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I
e Ellobius_lutescens.LOEQ01003611.1                        240029  1 -    369425 I
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 30936  0 -     67205 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               12110 14 +    209709 A---TACATT----ATGGTA---T
s Acinonyx_jubatus.LLWD01000356.1                         2034248 14 +   3721120 A---TATATT----ATGATG---T
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    112863 13 -    189883 -----ATATA----ATATGT-G-T
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10657586 14 +  23371972 A---TATATT----ATGATG---T
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7094933 14 -  16596857 A---TATATT----ATGATG---T
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   17146 10 -     22067 -----ACATG----ATGTA-----
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   1620 14 -     60446 A---TATATT----ATGGTA---T
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         2340 14 -     29318 A---TATATT----ATGGTA---T
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         1275 14 +     38766 A---TATATT----ATGGTA---T
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          2234 14 -     80423 A---TATATT----ATGGTA---T
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            10537 14 -     18050 A---TATATT----ATGACA---T
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_1710068                                250 13 +      1555 A---TATAT-----ATGACA---T
i Alouatta_caraya.k141_1710068                          C 0 C 0
s Alouatta_discolor.k141_811576                             11210 14 -     21359 A---TATATT----ATGACA---T
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                 829 13 +      2129 A---TATA-T----ATAACA---T
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_2177643                           213 13 -      1868 A---TATA-T----ATGACA---T
i Alouatta_macconnelli.k141_2177643                     C 0 C 0
s Alouatta_nigerrima.k141_3537692                             262 13 +      1660 A---TATA-T----ATGACA---T
i Alouatta_nigerrima.k141_3537692                       C 0 C 0
s Alouatta_palliata.k141_2764429                              179 14 -      1480 A---TATATT----ATGACA---T
i Alouatta_palliata.k141_2764429                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            4255 13 -      4927 A---TATAT-----ATGACA---T
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_1531728                             394 14 -      1692 A---TATATT----ATGACA---T
i Alouatta_seniculus.k141_1531728                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3520387  9 +   4113121 A---T---------ATGATA---T
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      390588 14 -    631301 A---TATATT----GTGATA---T
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            30968  9 +     33004 A---T---------ATGATA---T
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 62889 14 +     78111 A---TATATT----ATGACA---T
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            5831 14 +     22701 A---TATATT----ATGACA---T
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5749788 14 +   9889416 A---TATATT----ATGACA---T
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             6377 14 -    104377 A---TATATT----ATGACA---T
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               6379 14 +     23246 A---TATATT----ATGACA---T
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     3941 12 +      5067 T---ATTACA----TTGTA-----
i Aplodontia_rufa.AprRuf_scaffold_156013                I 6 C 0
s Arctocebus_calabarensis.k141_587554                        1309 13 +      9265 A---TA--TT----ATAACA--TT
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 8994 14 -     29036 A---TATATT----ATGATA---T
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9539648 14 +  39197703 A---TATATT----ATGACA---T
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             60919 14 +     85812 A---TATATT----ATGACA---T
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                11932 14 +     89302 A---TATATT----ATGACA---T
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             16435 14 -     58268 A---TATATT----ATGACA---T
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             64427 14 +    119057 A---TATATT----ATGACA---T
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               6398 14 -     25888 A---TATATT----ATGACA---T
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 7043 12 -     16375 A---TA--TT----ATGACA---T
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                                662 12 +      6337 A---TA--TT----ATGACA---T
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26380457 14 +  51448160 A---TATATT----ATGATA---T
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        5629 14 -     13118 A---TATATT----ATGATA---T
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   43457  9 -     72089 A---T---------ATGATA---T
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6560120  9 +   6870073 A---T---------ATGATA---G
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138140229  9 - 161108492 A---T---------ATGATA---G
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     572770  9 -    998990 A---T---------ATGATA---G
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136295962  9 - 158972876 A---T---------ATGATA---G
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1233041  9 -   1914593 A---T---------ATGATA---G
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               114285 14 -    171031 A---TATATT----ATGACa---t
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 13314 14 +    125063 A---TATATT----ATGACa---t
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                15357 14 -    216513 A---TATATT----ATGACa---t
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        7900 14 -    134917 A---TATATT----ATGACa---t
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3219825 14 -   8989139 G---TATATT----ATGGTA---C
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           397526 14 -  15254737 G---TATATT----ATGGTA---C
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2973262 14 +   6889770 G---TATATT----ATGGTA---C
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11519734 14 +  39901454 A---TATATT----ATGATG---T
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   14759 14 +     87036 A---TATATT----ATGATG---T
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11266401 14 -  35597290 A---TATATT----ATGATG---T
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11088935 14 +  39895921 A---TCTATT----ATGATG---T
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16455950 14 -  44759192 A---TCTATT----ATGATG---T
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21325463  9 + 157394656 A---T---------ATGATA---T
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135706691  9 - 157403528 A---T---------ATGATA---T
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          309330 14 +    345090 A---TATATT----GTGGTA---T
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               59784 14 +     67245 A---TATATT----ATGATA---T
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   31380 14 +     33760 A---TATATT----ATAATG---C
i Castor_canadensis.CasCan_scaffold_47037               I 4 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   159147 17 -    276539 A---TATATT----ATGAAACGGA
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15786858 14 -  24422027 A---AATGTT----ATGATG---T
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15798794 14 -  24440124 A---AATGTT----ATGATG---T
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       176985 14 +    436027 A---AATGTT----ATGATG---T
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18891131 14 -  29618158 A---TATCTT----ATGATA---T
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 8675 14 -     26817 A---TATCTT----ATGATA---T
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                12918 14 +     25043 A---TATCTT----ATGATA---T
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         8358 14 +     21754 A---TATATC----GTGGTA---T
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4364140 14 +   7569818 A---TATACT----ATGATG---T
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         3897 14 -      9338 A---TATACT----ATGATG---T
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6555566 14 +   6739814 A---TATATT----GTGGTA---T
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      27043 14 +     60454 A---TATATT----ATGGTA---T
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          2249 14 -     21101 A---TATATT----ATGGTA---T
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         59558 14 -    107033 A---TATATT----ATGGTA---T
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        2448 14 -     17608 A---TATATT----ATGGTA---T
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          29944 14 +     30494 A---TATATT----ATGGTA---T
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          58789 14 -     59240 A---TATATT----ATGGTA---T
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          2490 14 +     16677 A---TATATT----ATGGCA---T
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           24649 14 +     35983 A---TATATT----ATGGTA---T
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11991175 14 +  12117833 A---TATATT----ATGGTA---T
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46477935 14 +  46592721 A---TATATT----ATGGTA---T
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      41486 14 -     45581 A---TATATT----ATGGTA---T
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       2491 14 +     35577 A---TATATT----ATGGTA---T
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        2267 14 -     25661 A---TATATT----ATGGTA---T
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        2246 14 -     17744 A---TATATT----ATGGTA---T
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        21861 14 +     37128 A---TATATT----ATGGCA---T
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           3018 14 -      6963 A---AATATA----ATAATA---T
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           59326 12 -     68416 A---TA--TT----ATGACA---T
i Cheirogaleus_major.k141_1157592                       C 0 I 1
s Cheirogaleus_medius.k141_133808                            8371 12 +     13308 A---TA--TT----ATGACA---T
i Cheirogaleus_medius.k141_133808                       C 0 I 1
s Cheracebus_lucifer.k141_619653                             5942 14 -     18223 A---TATATT----ATCACA---T
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             22962 14 +     25473 A---TATATT----ATGACA---T
i Cheracebus_lugens.k141_203936                         C 0 I 4
s Cheracebus_regulus.k141_2128895                           42000 14 +     57117 A---TATATT----ATGACA---T
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          46679 14 +     54541 A---TATATT----ATGACA---T
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15962001 14 +  43084221 a---aatgTT----ATGATG---T
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         71486 14 +    196370 A---TATATT----ATGACa---t
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          15666 14 +     40510 A---TATATC----ATGACa---t
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15139381 14 -  15256731 A---TATATT----ATGGTA---T
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      34462 14 -     53260 A---TATATT----ATGGTA---T
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101145022 14 + 101219884 A---TATATT----ATGGTA---T
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                16724 14 -     21363 A---TATATT----ACGATG---T
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           762027 14 +    964067 A---TATATT----ATGATG---T
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10886791 14 +  10971483 A---TATATT----ATGGTG---T
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147664956 14 + 156195979 A---TATATT----ATGGTG---T
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            16941 14 +     23629 A---TATATT----ATGGTA---T
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60613853 14 +  78930452 A---TATATT----ATGATG---C
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252          927 17 -      5782 ATTGTATATT----ATGCTG---T
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 I 6
s Cricetomys_gambianus.CriGam_scaffold_949                 278836 12 -    399297 -----ATATA----ATGTAC---T
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53029497 12 +  72327488 -----ATATA----AAGCAC---T
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            52284 14 -     70449 A---TATATT----ATGATG---T
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  208483  7 -    956709 -----ATATC----AT--------
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                18037 14 +     26546 A---AATGAT----ACGATG---T
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             59125 14 -    236241 A---AATGCT----ACGATG---T
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          183903 14 -   6883506 A---ACTATT----ATAATG---T
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16845178 12 +  31942871 A---TA--TT----ATGACA---T
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80037081 14 -  96802777 A---TATATT----ATGATA---T
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18699060 14 -  18957592 A---TATATT----ATGATA---T
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 322789 14 +    993696 A---TATACT----ATGATG---T
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   3444 14 +    151128 A---TATACT----ATGATG---T
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   157265 14 +    228994 A---AATGTT----ATGATG---T
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3656574 14 +   4240102 C---CATACT----ATAATG---C
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 28217 14 +     28912 C---CATACT----ATAATG---C
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                36353 14 -     73477 A---AATGCT----ATGGTG---C
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22998788 12 -  44670279 G---TATAAA------CGCA---T
i Echinops_telfairi.JH980316.1                          I 70 I 85
s Eidolon_helvum.KE772537.1                                 12518 14 +     24177 A---TATATT----GTGatg---t
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1491738  9 +   1727528 A---T---------ATGATA---T
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7816088 11 +  15467074 a---tat---attt----ta---a
i Elephantulus_edwardii.JH947210.1                      C 0 I 793
s Enhydra_lutris.KZ291749.1                              85872458 14 +  99434291 A---TATATT----ATGATG---T
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4704427  9 +   6522550 G---T---------CTGATG---T
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5853238 14 -   7175178 a---tacatt----atgatg---t
i Equus_asinus.JREZ01000062.1                           C 0 I 5
s Equus_caballus.CM000402.2                              13351743 14 +  41866177 a---tacatt----atgatg---t
i Equus_caballus.CM000402.2                             C 0 I 5
s Equus_przewalskii.ATBW01073585.1                          13232 14 +     92910 a---tacatt----atgatg---t
i Equus_przewalskii.ATBW01073585.1                      C 0 I 5
s Erinaceus_europaeus.JH835290.1                         11534517 14 +  16010500 G---TGTATT----ATGACG---T
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48774149 14 -  48907691 A---TATATT----ATGGTG---T
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          315299 14 +    330699 A---TATATT----ATGATA---T
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             61750 14 +     89355 A---TATATT----ATGATA---T
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              5378 12 +     13586 A---TA--TT----ATGATA---T
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               5309 12 -      6809 A---TA--TT----ATGATA---T
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            11786 12 +     36558 A---TA--TT----ATGATA---T
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             8107 12 +     60246 A---TA--TT----ATGTTA---T
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                11583 12 +    109717 A---TA--TT----ATGATA---T
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               15969 12 +     16540 A---TA--TT----ATGTTA---T
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                16244 12 +     27497 A---TA--TT----ATGATA---T
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           18701 12 +     26808 A---TA--TT----ATGTTA---T
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                33439 12 +     46535 A---TA--TT----ATGATA---T
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              16163 12 -     29447 A---TA--TC----ATGATA---T
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129893207 14 - 159252932 A---TATATT----ATGATG---T
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129280299 14 - 158578461 A---TATATT----ATGATG---T
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 21439 14 +     52776 A---TATATT----ATGATG---T
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Galago_moholi.ctg555                                     211203 13 -    847004 A---TA--TC----ATAACA--TT
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           13577 13 -     43889 A---TA--TC----ATAACA--TT
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          10651 13 +     27357 A---TA--TG----ATGACA--TT
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               156556 14 +    324696 A---TATACC----ATGATG---T
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    181532  9 -    189561 A---T---------ATGATA---T
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           13334 14 -     18683 T---AATATG----ATGTAG---T
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               5623 14 -     14630 A---TCTATT----ACGGTA---T
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119652723 14 - 195582420 A---TCTATT----Acggta---t
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   77861  2 +    118900 T---A-------------------
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         2154 12 +     10286 A---TA--TT----ATGATA---T
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                              631 12 -     11661 A---TA--TT----ATGATA---T
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             5960 12 +     56096 A---TA--TT----ATGATA---T
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        29211 12 -     42470 A---TA--TT----ATGATA---T
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        45834 12 -     54384 A---TA--TT----ATGATA---T
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              17490 14 +     53719 A---TATATT----ATGATA---T
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                27747  9 -     91191 A---C---------ATGATA---T
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2551358 13 +  31725842 a---aatatt----atgaca----
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               61102 14 +     73687 A---TACATA----ACAATA---T
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 I 90
s Hippopotamus_amphibius.HipAmp_scaffold_1308              147385 14 +    277961 A---TATATG----ATGATA---T
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 I 4
s Hipposideros_armiger.JXIK01001085.1                      278652 14 -    477199 A---TATATT----ACGATG---T
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              7798 14 -      9143 A---TATATT----ATGATG---T
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      5033 14 -   7690867 A---TGCATT----ATGGTA---T
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 17559 14 -     67322 A---TATATC----ATGATG---T
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19269 14 -    119109 A---AATATT----ATGATA---T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              5458 14 +      5897 A---TGCATT----ATGCTA---T
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_1878600                               351 14 -      1230 A---TGCATT----ATGGTA---T
i Hylobates_agilis.k141_1878600                         C 0 I 67
s Hylobates_pileatus_b.ContigUN                                 14625004 14 -  25970782 A---TGCATT----ATGGTA---T
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            2260 14 -      2977 A---TGCATG----ATGGTA---T
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             34163 14 -     60944 A---TGCATT----ATGGTA---T
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     6424 14 +     22540 A---AATGTT----ATGATG---T
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7126114 12 +  13083262 T---ACTATG----ATGCA-----
i Ictidomys_tridecemlineatus.JH393315.1                 I 6 C 0
s Indri_indri.k141_5141390                                    676 12 -      3181 A---TA--TT----ATGACA---T
i Indri_indri.k141_5141390                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               9286 14 +     17520 A---TATATT----ATGATA---T
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8566158 10 +  11848649 -----ACATG----ATGTA-----
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               23898 14 +     37189 A---TATATT----ATGATA---T
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          50517 14 -    147782 A---TATATT----ATGACA---T
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   114699  9 -    115756 G---T---------ATAATG---T
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 C 0
s Lemur_catta.scaffold_1                                258407515 12 - 285822530 A---TA--TT----ATGATA---T
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        24262 11 +     39228 A---TA--TT----ATGACA----
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            53646 11 +     63517 A---TA--TT----ATGACA----
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        78910 11 +    116806 A---TA--TT----ATGACA----
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     31901 11 -     33031 A---TA--TT----ATGACA----
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3086251 14 -   3498232 A---CATATT----ATGATG---T
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    13525 14 +     22452 A---CATATT----ATGGTG---T
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            136242 14 +   3060487 a---tatatt----ATGATA---T
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19248660 14 +  19376315 A---TATATT----ATGGTA---T
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           10952 13 +     84689 A---TA--TT----ATGACA--TT
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3778701 13 +   6799190 A---TA--TT----ATGACA--TT
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20594481 14 -  62548349 a---tattta----atgata---t
i Loxodonta_africana.GL010040.1                         I 7 I 88
s Lycaon_pictus.CM007556.1                               11088391 14 +  39895028 A---TATATT----ATGATG---T
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             20395 14 +     74745 A---TATATT----ATGGTA---C
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12706852 14 +  12821369 A---TATATT----ATGGTA---C
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                2494 14 -      3136 A---TATATT----ATGGTA---C
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           47312 14 +     63263 A---TATATT----ATGGTA---C
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                 2017 14 -      2568 A---TATATT----ATGGTA---C
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 2602 14 -      7381 A---TATATT----ATGGTA---C
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  45819 14 -     79256 A---TATATT----ATGGTA---C
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196035926 14 + 196197964 A---TATATT----ATGGTA---C
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11446096 14 +  11645122 A---TATATT----ATGGTA---C
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   4766 14 -     46448 A---TATATT----ATGGTA---C
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                2440 14 -     13212 A---TATATT----ATGGTA---C
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 16119 14 -     55006 A---TATATT----ATGGTA---C
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43841235 14 +  43892939 A---TATATT----ATGGTA---C
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               17405 14 -     24607 A---TATATT----ATGGTA---C
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               4771 14 -     27140 A---TATATT----ATGGTA---C
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43437820 14 -  43563597 A---TATATT----ATGGTA---T
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4450640 14 -   4543643 A---TATATT----ATGGTA---T
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            146324 14 +    252755 A---TATATT----ATGATG---T
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             36467 14 +     58827 A---TATATT----ATGATG---T
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36873938 12 +  64221397 T---ATTATG----ATGCA-----
i Marmota_marmota.CZRN01000005.1                        I 6 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       64695 14 -    234502 C---TACGTT----ATGGTG---T
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             1270 14 -     87323 A---TATATT----ATGATG---T
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               12995 12 +     15977 -----ATATA----ATGTAC---T
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1047190 10 -  26018355 -------ATA----ATGCAC---T
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_227248                    574 14 -      1377 A---TGTATT----ATGATA---T
i Mesoplodon_bidens.MesBid_scaffold_227248              C 0 C 0
s Microcebus_murinus.CM007691.1                          16510536 12 +  47401472 A---TC--TT----ATGACA---T
i Microcebus_murinus.CM007691.1                         C 0 I 1
s Microgale_talazaci.MicTal_scaffold_34660                  34791 14 -     48017 G---TATATC----ATCATA---T
i Microgale_talazaci.MicTal_scaffold_34660              I 71 I 80
s Micronycteris_hirsuta.MicHir_scaffold_37978               22969 14 -     32043 C---TATATT----ATGATA---T
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8209946  9 +  10048721 A---T---------ATGATg---t
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            34600  9 +     45743 A---T---------ATGATG---T
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         2369 14 +     29742 A---TATATT----ATGGTA---T
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        11767 14 -    104932 A---CATATT----ATGATG---T
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     5925 12 +      8497 A---TA--TT----ATGACA---T
i Mirza_zaza.k141_226143                                C 0 I 1
s Monodon_monoceros.MonMon_M_scaffold_5598                 146671 14 +    154973 A---TATATT----ATGATA---T
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                161487 14 +    265003 A---TATATT----ATGATA---C
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  1762  9 -     19904 A---T---------ATGATA---T
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  145185 14 -    168139 A---CATATT----ATGATA---T
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          19797  9 -    100666 A---T---------ATGATG---T
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70766834  8 +  92629107 -----ATGTA----AT-------T
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75489894  8 +  98207768 -----atgta----at-------t
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67556128 12 +  89017189 -----ATATA----ATGCCT---T
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74331070  8 +  97876770 -----ATGTA----AT-------T
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             12092 14 +     98495 T---AGCGTG----ATGTAG---T
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4424639 14 -  28371801 A---TATATT----ATGATG---T
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myotis_brandtii.KE161952.1                               968108  9 +   8389877 A---T---------ATGATG---T
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5019781  9 +   6462685 A---T---------ATGATG---T
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3465690  9 -   3747815 A---T---------ATGATG---T
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        10900  9 +     66751 A---T---------ATGATG---T
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             5293 14 -      8794 A---TATACC----ATGAAA---T
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            118946 10 +    362372 -----ATATA----ATGTA-----
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               8876 14 +     48152 A---TATATT----ATGGTA---T
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4485158 14 -  14209539 A---CATATT----ATGATG---T
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3951283 14 -   4490290 A---TATATT----ATGATA---T
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  49972 14 +     94413 A---TATATT----ATGATA---A
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_720788                             258 14 -      1065 A---TACATT----ATGGTA---T
i Nomascus_annamensis.k141_720788                       C 0 C 0
s Nomascus_concolor.k141_226614                              1562 14 -      5092 A---TACATT----ATGGTA---T
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_39679                              533 14 -     17937 A---TGCATT----ATGGTA---T
i Nomascus_gabriellae.k141_39679                        C 0 I 39
s Nomascus_siki_b.tarseq_80                             25280 14 -  18771707 A---TGCATT----ATGGTA---T
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  2983 14 +      4512 A---TGCATT----ATGGTA---T
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                31191 14 +   3668941 A---TATATT----ATGATG---T
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65567396 13 -  95554990 A---TA--TT----ATGACA--TT
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            4122 13 +      6470 A---TA--TT----ATGACA--TT
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65669731 13 +  89412551 A---TA--TT----ATGACA--TT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4996272 14 -  23139505 A---TATATT----ATAGTG---T
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Odobenus_rosmarus.KB229369.1                             679824 14 -   3126709 A---CATATT----ATGATG---T
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1079968  9 +   1425656 A---T---------ATGATA---T
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         37260  9 +     78940 A---T---------ATGATA---T
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  37386 15 +     62360 -----ATATA-ATAATCTAC---T
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7224968 14 -   7562323 A---TATATT----ATGATA---T
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              57777 14 -     66828 A---TATATA----GTGATA---T
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 I 89
s Oryctolagus_cuniculus.CM000803.1                      141876559 14 + 163896628 A---TATATT----ATGGTG---T
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      308475 14 -    505867 A---TATATT----ATGATG---T
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        1021 13 -     53940 A---TA--TC----ATGACA--TT
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18009001 13 -  38779656 A---TA--TC----ATGACA--TT
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134077538  9 - 275406953 A---C---------ATGATA---T
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      78753  9 +    140051 A---C---------ATGATA---T
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.AJFE02002857.1                                 673 14 -      1091 A---TATATT----ATGGTA---T
i Pan_paniscus.AJFE02002857.1                           C 0 I 220
s Pan_troglodytes.KZ622857.1                               327841 14 +    772158 A---TATATT----ATGGTA---T
i Pan_troglodytes.KZ622857.1                            I 17 I 266
s Panthera_onca.PanOnc_flattened_line_1615                  34600 14 +    295523 A---TATATT----ATGATG---T
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3638334 14 +  18214204 A---TATATT----ATGATG---T
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5028009 14 -   6340057 A---TATATT----ATGATG---T
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1066388  9 -   1292953 A---C---------ATGATA---T
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188156607 14 - 188283584 A---TATATT----ATGGTA---T
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             4924 14 +      5367 A---TATATT----ATGGTA---T
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47513992 14 +  47705337 A---TATATT----ATGGTA---T
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 67968 14 -    104429 A---TATATT----ATGGTA---T
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    6504 14 +     14967 A---TATATT----ATGGTA---T
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 2363 14 -      7628 A---TATATT----ATGGTA---T
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    116062 14 -    135482 A---TATTTT----ATGATG---T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           5712 13 -     23713 A---TA--TT----ATAACG--TT
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            25025 13 -     27972 A---TA--TT----ATAACG--TT
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      44855 14 -     45160 C---AATGTT----ATAATG---C
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4950637 12 -   8017169 -----ATATA----ATCTGC---T
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    12710 13 -     36578 A---AATGT-----ATGGCA---T
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            121573 14 -    122454 A---TATATT----ATGATA---T
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1987485                           2390 14 -      5908 A---TATATT----ATGGTA---T
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       3014 14 -     17985 A---TATATT----ATGGTA---T
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            2381 14 +      7694 A---TATATT----ATGGTA---T
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26740859 14 +  26888534 A---TATATT----ATGGTA---T
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            97725  9 +    112873 A---T---------ATGATG---T
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             44123 14 -     61926 A---TATATT----ATGACa---t
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        25508 14 +     78826 A---TATATT----ATGACA---T
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              9555 14 -     15800 A---TATATT----ATGACA---T
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        12754 14 -     16101 A---TATATT----ATGACA---T
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          5982 14 +      9673 A---TATATT----ATGACA---T
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13474982 14 -  19735023 A---TATATT----ATGACa---t
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           13885 14 -     31692 A---TATATT----ATGACA---T
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           5659 14 +     21690 A---TATATT----ATGATA---T
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       23225 14 +     44506 A---TATATT----ATGACA---T
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        23437 14 +     67491 A---TATATT----ATGACA---T
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      13677 14 -     98129 A---TATATT----ATGACA---T
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     23277 14 +    147771 A---TATATT----ATGACA---T
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        23534 14 -     23762 A---TATATT----ATGACA---T
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          3996 14 -     55515 A---TATATT----ATGACA---T
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         23350 14 +    152463 A---TATATT----ATGACA---T
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       1067 14 -    119457 A---TATATT----ATGACA---T
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         13073 14 +    134592 A---TATATT----ATGACA---T
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          23660 14 -     75465 A---TATATT----ATGACA---T
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              187509 14 -    373494 A---TCTATT----ACGGTA---T
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19808157 14 +  19899266 A---TCTATT----ATGGTA---T
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               6120 14 -     15069 A---TATATT----ATGGTA---T
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              6250 14 +     14865 A---TATATT----ATGGTA---T
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                2212 14 -      9567 A---TACATA----ACGATA---T
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 I 90
s Prolemur_simus.MPIZ01000048.1                           6848892 12 +  12164890 a---ta--tt----ATGATA---T
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     16564 12 -     30946 A---TA--TT----ATGACA---T
i Propithecus_coquerelli.NW_012147863.1                 T 637 I 637
s Propithecus_coronatus.k141_1353159                         3958 12 +     11805 A---TA--TT----ATGACA---T
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           43301 12 +     52369 A---TA--TT----ATGACA---T
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         35688 12 -     44753 A---TA--TT----ATGACA---T
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            17612 12 +     27322 A---TA--TT----ATGACA---T
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       17248 12 -     53241 A---TA--TT----ATGACA---T
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         39512 12 -     48185 A---TA--TT----ATGACA---T
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           34544 12 +     77221 -----ATATA----ATGTAC---T
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            4132 14 -     27784 A---TATATT----ATGATA---C
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        246949 14 -    344369 A---TATATT----ATGATG---T
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13246249 14 -  17261082 A---TATATT----GTgatg---t
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             604200 14 -   3946241 A---TATATT----GTgatg---t
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131534587 14 - 161321710 A---TACATT----ATGATG---T
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             30241 14 +     56732 A---TATATT----ATGGTA---T
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6806729 14 +   6970761 A---TATATT----ATGGTA---T
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             6120 14 +     18040 A---TATATT----ATGGTA---T
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                16047  9 +     68503 A---T---------ATGATA---T
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13915837 12 +  90463843 -----ATATA----ATGCAT---T
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1788076 14 +   2252614 A---TACATT----ATGATG---T
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                             532 14 -     17045 A---TATATT----ATGGTA---T
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206378009 14 - 206558726 A---TATATT----ATGGTA---T
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44856923 14 -  45163003 A---TATATT----ATGGTA---T
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                19583 14 +    109198 A---TATATT----GTGATG---T
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       8214  9 +     12214 A---T---------ATGATA---T
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15673087 14 -  43202129 A---TATATT----ATGACA---T
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        5000 14 +     34089 A---TATATT----ATGACA---T
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              4942 14 -     60842 A---TATATT----ATGACA---T
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              5035 14 +     67014 A---TATATT----ATGACA---T
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              5013 14 +     60816 A---TATATT----ATGACA---T
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 4950 14 -     76454 A---TATATT----ATGACA---T
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17341675 14 -  30362882 A---TATCTT----ATGATA---T
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         21036 14 -     62485 A---TATCTT----ATGATA---T
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   32554 14 -    114521 A---TATATT----ATGATG---T
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        3733 14 +     15331 A---TATATT----ATGGTA---T
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       9126 14 +     20762 A---TATATT----ATGGTA---T
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         119129 14 +    130994 A---TATATT----ATGGTA---T
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           37915 14 +     46263 A---TATATT----ATGGTA---T
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     31035 14 +     42640 A---TATATT----ATGGTA---T
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        14075 14 +     30600 A---TATATT----ATGGTA---T
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  100585 12 -    120886 -----ATATA----ACATAC---T
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            19138 14 +    739146 A---TATATT----AAGACA---A
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17766334 13 -  27805282 ----aaaatt----atgATG---T
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2240030 12 +   2842873 T---ACTATG----ATGCA-----
i Spermophilus_dauricus.KZ294190.1                      I 6 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             235068 14 -    276980 A---TATATT----ATGATG---T
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            27845 14 +     62062 A---CATATT----ATGATA---T
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189272125 17 + 218635234 A---TACATC----ATGAAACGAA
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        15265 14 -  13920577 A---TGCATT----ATGGTA---T
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                 511 14 +     20549 A---TGTATT----ATGATG---T
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               14957 14 +     45698 A---TATACC----ATGAAA---T
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      807378 14 +   1148477 A---TATATT----ATGATG---T
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  58089 14 +     99546 A---TATATT----ATGATG---T
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               26804 14 +     42269 A---TATATC----CTGACA---T
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               60120 14 +     65473 A---TATATC----CTGACA---T
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194008129 14 - 194193292 A---TATATT----ATGGTA---T
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             38974 14 -     47444 A---AATGTG----ATGACA---T
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  5777 14 +      6782 A---AATATT----ATAATG---C
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  136129 14 -    259118 A---TATATT----ATGATA---T
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        27231 14 +     38948 A---TATATT----ATGGTA---T
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   20963 14 -     32910 A---TATATT----ATGGTA---T
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      2349 14 -     12939 A---TATATT----ATGGTA---T
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       2285 14 -     14244 A---TATATT----ATGGTA---T
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           43684 14 -     54611 A---TATATT----ATGGTA---T
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        1487 14 -     11566 A---TATATT----ATGGTA---T
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     3664 14 -     15592 A---TATATT----ATGGTA---T
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          2320 14 +     14371 A---TATATT----ATGGTA---T
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                    601 14 +     12481 A---TATATT----ATGGTA---T
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                         477 14 -     24393 A---TATATT----ATGGTA---T
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       5723 14 -     28054 A---TATATT----GTGGTA---T
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44660523 14 -  44834318 A---TATATT----GTGGTA---T
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       2831 14 +     13828 A---TATATT----ATGGTA---T
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   5440  9 +     90398 A---T---------ATGACA---C
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16085158 14 +  31416278 A---TATATA----ATGAGa---t
i Trichechus_manatus.JH594618.1                         C 0 I 90
s Tupaia_chinensis.KB320831.1                             2793173 14 -   3938065 A---TACTTT----ATGATG---T
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    5373 14 +     13056 A---TACTTT----ATGATG---T
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69313684 14 -  96451834 A---TATATT----ATGATA---T
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   1586 14 +     10241 A---TATATC----ATGATG---C
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6515078 14 +  28682327 A---TATATT----ATGATG---T
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  5589 12 -     20643 A---TA--TT----ATGATA---T
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             25130 12 -     33872 A---TA--TT----ATGATA---T
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1524930 14 -   2331223 G---TATATT----ATGGTA---T
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                138572 14 -    281493 A---TATATT----ATGATG---T
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       127144 12 -    134049 T---ATTACG----ATGCA-----
i Xerus_inauris.XerIna_scaffold_7898                    I 6 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        214551 14 -    227762 A---CATATT----ATGATA---T
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     15466 11 -     20485 ------GATG----ATGAAT---A
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           7183 14 -      8775 A---TGTATT----ATGATA---T
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                701732 90 +    802869 I
e Crocidura_indochinensis.CroInd_scaffold_848148              199  0 +      1327 C
e Hylobates_klossii.k141_285563                               343 193 +      1026 I
e Microtus_ochrogaster.CM001673.1                        22820341  4 -  98408828 I
e Ondatra_zibethicus.OndZib_scaffold_6821                  125594  4 +    145789 I
e Octodon_degus.JH651621.1                                3685767  0 +  10294119 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     90228  0 -    117718 C
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I
e Ellobius_talpinus.LOJH01090055.1                           7151  4 -      7838 I
e Ellobius_lutescens.LOEQ01003611.1                        240029  1 -    369425 I
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 30936  0 -     67205 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               12124 39 +    209709 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--AACAG------------------ACACACTT--AT--TT-T
s Acinonyx_jubatus.LLWD01000356.1                         2034262 36 +   3721120 AGTC-----A-A-AT-GAATGT--------------------CTTTTC-----TTT------------------ATGCACCT--AT--TT-C
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    112876  2 -    189883 ----------------------------------------------------------------------------------------T--T
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10657600 22 +  23371972 AGCA-----A-A-T--GAGTGT--------------------ATTATCA--GC---------------------------------------
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 I 3
s Ailurus_fulgens.LNAC01000003.1                          7094947 23 -  16596857 AGTA-----A-A-GT-AAATGT--------------------ATTATCA--GC---------------------------------------
i Ailurus_fulgens.LNAC01000003.1                        C 0 I 3
s Allactaga_bullata.AllBul_scaffold_70162                   17156 38 -     22067 -ATA-----A-A-AT-GAATGT--------------------CATGTCT--ATTAT------------------ATGCACCT--AT--TT-T
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   1634 39 -     60446 AGTC-----A-A-AT-GAGTGT--------------------CATTTGT--AATAT------------------GCACACTT--AT--TT-T
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         2354 39 -     29318 TGTC-----A-A-AT-GAGTGT--------------------CATTTGT--AACAT------------------GCACACTT--AT--TT-T
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         1289 39 +     38766 AGTC-----A-A-AT-GAGTGT--------------------CATTTGT--AATAT------------------GCACACTT--AT--TT-T
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          2248 39 -     80423 TGTC-----A-A-AT-GAGTGT--------------------CATTTGT--AACAT------------------GCACACTT--AT--TT-T
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            10551 39 -     18050 AGTC-----A-A-AT-GAGCCT--------------------CATTTCT--AATAT------------------ACACACTT--AT--TT-T
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_1710068                                263 39 +      1555 AGTC-----A-A-AT-AAGTCT--------------------CATTTCT--GATAT------------------ACACACTT--AT--TT-T
i Alouatta_caraya.k141_1710068                          C 0 C 0
s Alouatta_discolor.k141_811576                             11224 39 -     21359 AGTC-----A-A-AT-GAGCCT--------------------CATTTCT--AATAT------------------ACACACTT--AT--TT-T
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                 842 39 +      2129 AGTC-----A-A-AT-AAGTCT--------------------CATTTCT--GATAC------------------ACACACTT--AT--TT-T
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_2177643                           226 39 -      1868 AGTC-----A-A-AT-AAGTCT--------------------CATTTCT--GATAC------------------ACACACTT--AT--TT-T
i Alouatta_macconnelli.k141_2177643                     C 0 C 0
s Alouatta_nigerrima.k141_3537692                             275 39 +      1660 AGTC-----A-A-AT-AAGTCT--------------------CATTTCT--GATAC------------------ACACACTT--AT--TT-T
i Alouatta_nigerrima.k141_3537692                       C 0 C 0
s Alouatta_palliata.k141_2764429                              193 39 -      1480 AGTC-----A-A-AT-GAGCCT--------------------CATTTCT--GATAT------------------ACACACTT--AT--TT-T
i Alouatta_palliata.k141_2764429                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            4268 39 -      4927 AGTC-----A-A-AT-AAGTCT--------------------CATTTCT--GATAC------------------ACACACTT--AT--TT-T
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_1531728                             408 39 -      1692 AGTC-----A-A-AT-GAGCCT--------------------CATTTCT--AATAT------------------ACACACTT--AT--TT-T
i Alouatta_seniculus.k141_1531728                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3520396 36 +   4113121 AGTA-----A-A-AT-GCATAT--------------------TATTCCA--AGTAT------------------ATGCACCA--at------
i Ammotragus_lervia.NIVO01013474.1                      C 0 I 1
s Anoura_caudifer.AnoCau_scaffold_422                      390602 39 -    631301 AGGA-----A-A-AT-CAGTGT--------------------TATTTCT--ACTAT------------------ATGTACCT--AG--TT-T
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            30977 36 +     33004 AGCA-----A-A-AT-GCATAT--------------------CATTCCA--AATAC------------------ATGCACCA--AT------
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 I 1
s Aotus_azarae.k141_3170768                                 62903 39 +     78111 AGTC-----A-A-AT-GAGTCT--------------------CATTTCT--ACTAT------------------ACACACTT--AT--TT-T
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            5845 39 +     22701 AGTC-----A-A-AT-GAGTCT--------------------CATTTCT--ACTAT------------------ACACACTT--AT--TT-T
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5749802 39 +   9889416 AGTC-----A-A-AT-GAGTCT--------------------CATTTCT--ACCAT------------------ACACACTT--AT--TT-T
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             6391 39 -    104377 AGTC-----A-A-AT-GAGTCT--------------------CATTTCT--ACTAT------------------ACACACTT--AT--TT-T
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               6393 39 +     23246 AGTC-----A-A-AT-GAGTCT--------------------CATTTCT--ACTAT------------------ACACACTT--AT--TT-T
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     3953 34 +      5067 -GTA-----A-A-AC-TAAT-----------------------ATTT-C--CAAAT------------------ATGCACAC--AC--AT-T
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        1322 39 +      9265 AGTC-----C-A-AT-GAATGT--------------------TATTTCT--ATTTT------------------GTGCACCT--AT--CT-T
i Arctocebus_calabarensis.k141_587554                   C 0 I 9
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 9008 39 -     29036 GGTA-----A-A-AT-CAATGT--------------------CATTTCT--ATTCT------------------ATGTACCT--AT--TT-T
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9539662 39 +  39197703 AGTC-----A-A-AT-GAGTCT--------------------CATTTCT--AACAT------------------ACACACTT--AT--TT-T
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             60933 39 +     85812 AGTC-----A-A-AT-GAGTCT--------------------CATTTCT--AACAT------------------ACACACTT--AT--TT-T
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                11946 39 +     89302 AGTC-----A-A-AT-GAGTCT--------------------CATTTCT--AACAT------------------ACACACTT--AT--TT-T
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             16449 39 -     58268 AGTC-----A-A-AT-GAGTCT--------------------CATTTCT--AACAT------------------ACACACTT--AT--TT-T
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             64441 39 +    119057 AGTC-----A-A-AT-GAGTCT--------------------CATTTCT--AACAT------------------ACACACTT--AT--TT-T
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               6412 39 -     25888 AGTC-----A-A-AT-GAGTCT--------------------CATTTCT--AACCT------------------ACACACTT--AT--TT-T
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 7055 39 -     16375 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--ACTAT------------------GTGCACCT--AT--TT-T
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                                674 39 +      6337 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--ACTAT------------------GTGCACCT--AT--TT-T
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26380471 36 +  51448160 TGTA-----A-A-AT-GAATGT--------------------CATTTCA--AGTAT------------------ATGCATCT--AT------
i Balaenoptera_acutorostrata.KI537095.1                 C 0 I 1
s Balaenoptera_bonaerensis.DF502048.1                        5643 36 -     13118 TGTA-----A-A-AT-GAATGT--------------------CATTTCA--AGTAT------------------ATGCATCT--AT------
i Balaenoptera_bonaerensis.DF502048.1                   C 0 I 1
s Beatragus_hunteri.BeaHun_scaffold_21644                   43466 36 -     72089 AGTA-----A-A-AT-GCATAT--------------------CATTCCA--AGTAT------------------ATGCACCA--AT------
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 I 1
s Bison_bison.KN264915.1                                  6560129 36 +   6870073 AGTA-----A-A-AT-GCATAT--------------------CATTCCA--AGTAT------------------ATGCACCA--AT------
i Bison_bison.KN264915.1                                C 0 I 1
s Bos_indicus.CM003021.1                                138140238 36 - 161108492 AGTA-----A-A-AT-GCATAT--------------------CATTCCA--AGTAT------------------ATGCACCA--AT------
i Bos_indicus.CM003021.1                                C 0 I 1
s Bos_mutus.JH883513.1                                     572779 36 -    998990 AGTA-----A-A-AT-GCATAT--------------------CATTCCA--AGTAT------------------ATGCACCA--AT------
i Bos_mutus.JH883513.1                                  C 0 I 1
s Bos_taurus.CM000177.6                                 136295971 36 - 158972876 AGTA-----A-A-AT-GCATAT--------------------CATTCCA--AGTAT------------------ATGCACCA--AT------
i Bos_taurus.CM000177.6                                 C 0 I 1
s Bubalus_bubalis.KI419065.1                              1233050 36 -   1914593 ACTA-----A-A-AT-GTATAT--------------------CATTCCA--AGTAT------------------ATGCACCA--AT------
i Bubalus_bubalis.KI419065.1                            C 0 I 1
s Cacajao_ayresi.k141_724503                               114299 39 -    171031 agtc-----a-a-at-gagtct--------------------catttct--actat------------------acacactt--at--tt-t
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 13328 39 +    125063 agtc-----a-a-at-gagtct--------------------catttct--actat------------------acacactt--at--tt-t
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                15371 39 -    216513 agtc-----a-a-at-gagtct--------------------catttct--actat------------------acacactt--at--tt-t
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        7914 39 -    134917 agtc-----a-a-at-gagtct--------------------catttct--actat------------------acacactt--at--tt-t
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3219839 39 -   8989139 AGTG-----A-A-GT-GAATAT--------------------CATTCTG--AGTAT------------------ATGCATCT--AT--TT-t
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           397540 39 -  15254737 AGTG-----A-A-GT-GAATAT--------------------CATTCTG--AGTAT------------------ATGCATCT--AT--TT-t
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2973276 39 +   6889770 AGTG-----A-A-GT-GAATAT--------------------CATTCTG--AGTAT------------------ATGCATCT--AT--TT-T
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11519748 23 +  39901454 AGTG-----A-A-GT-GAATGT--------------------ATTTTTA--CC---------------------------------------
i CanFam4.chr31                                         C 0 I 3
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   14773 23 +     87036 AGTG-----A-A-GT-GAATGT--------------------ATTTTTA--CC---------------------------------------
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 I 3
s Canis_lupus_dingo.QKWQ01001993.1                       11266415 23 -  35597290 AGTG-----A-A-GT-GAATGT--------------------ATTTTTA--CC---------------------------------------
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 I 3
s Canis_lupus_familiaris.chr31                           11088949 23 +  39895921 AGTG-----A-A-GT-GAATGT--------------------ATTTTTA--CC---------------------------------------
i Canis_lupus_familiaris.chr31                          C 0 I 3
s Canis_lupus_orion.HG994411.1                           16455964 23 -  44759192 AGTG-----A-A-GT-GAATGT--------------------ATTTTTA--CC---------------------------------------
i Canis_lupus_orion.HG994411.1                          C 0 I 3
s Capra_aegagrus.CM003214.1                              21325472 36 + 157394656 AGTA-----A-A-AT-GCATAT--------------------TATTCCA--AGTAT------------------ATGCACCA--AT------
i Capra_aegagrus.CM003214.1                             C 0 I 1
s Capra_hircus.CM004562.1                               135706700 36 - 157403528 AGTA-----A-A-AT-GCATAT--------------------TATTCCA--AGTAT------------------ATGCACCA--AT------
i Capra_hircus.CM004562.1                               C 0 I 1
s Carlito_syrichta.NW_007248099.1                          309344 39 +    345090 AGTC-----A-A-AG-GAGTGA--------------------CATTTCA--GTTAT------------------gcacactt--at--tt-t
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               59798 39 +     67245 AGCA-----A-A-AT-CAATGT--------------------CATTTCT--ACTAT------------------ATGTACCT--GT--TT-T
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   31394 35 +     33760 ---A-----A-A-AT-TAATGC--------------------TATTTCT--ACTAT------------------ATGCACCT---C--TT-T
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   159164 36 -    276539 TGTA-----A-A-AC-GGATGT--------------------CATTTCA--AGTAT------------------ATACACCT--GT------
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 I 13
s Cavia_aperea.AVPZ01000278.1                            15786872 56 -  24422027 AGTA-----A-A-AT-GAGTA-AAAATGCCATGATGtagtaaaatttat--attat------------------at--actt--ag--tt-t
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15798808 56 -  24440124 AGTA-----A-A-AT-GAGTA-AAAATGTCATGATGtagtaaaatttat--attat------------------at--actt--ag--tt-t
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       176999 56 +    436027 AGTA-----A-A-AT-GAGTA-AAAATGTCATGATGTAGTAAAATTTAT--ATTAT------------------AT--ACTT--AG--TT-T
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18891145 39 -  29618158 AGTC-----A-A-AT-GAACCT--------------------CATTTCT--ACTAT------------------ACACACTT--AT--TT-T
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 8689 39 -     26817 AGTC-----A-A-AT-GAACCT--------------------CATTTCT--ACTAT------------------ACACACTT--AT--TT-T
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                12932 39 +     25043 AGTC-----A-A-AT-GAACCT--------------------CATTTCT--ACTAT------------------ACACACTT--AT--TT-T
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         8372 39 +     21754 AGTC-----A-A-AG-GAGTGA--------------------CATTTCA--GTTAT------------------GCACACCT--AT--TT-A
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4364154 39 +   7569818 AGTA-----A-A-AT-GAATGT--------------------CACTTCT--ATGAC------------------ATGCACCT--AT--TT-T
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         3911 39 -      9338 AGTA-----A-A-AT-GAATGT--------------------CACTTCT--ATGAC------------------ATGCACCT--AT--TT-T
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6555580 39 +   6739814 AGTC-----A-A-AT-GAGTGT--------------------CATTTGT--AATAT------------------GCACACTT--AT--TT-T
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      27057 39 +     60454 AGTC-----A-A-AT-GAGTGT--------------------CATTTGT--AATAT------------------GCACACTT--AT--TT-T
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          2263 39 -     21101 AGTC-----A-A-AT-GAGTGT--------------------CATTTGT--AATAT------------------GCACACTT--AT--TT-T
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         59572 39 -    107033 AGTC-----A-A-AT-GAGTGT--------------------CATTTGT--AATAT------------------GCACACTT--AT--TT-T
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        2462 39 -     17608 AGTC-----A-A-AT-GAGTGT--------------------CATTTGT--AATAT------------------GCACACTT--AT--TT-T
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          29958 39 +     30494 AGTC-----A-A-AT-GAGTGT--------------------CATTTGT--AATAT------------------GCACACTT--AT--TT-T
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          58803 39 -     59240 AGTC-----A-A-AT-GAGTGT--------------------CATTTGT--AATAT------------------GCACACTT--AT--TT-T
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          2504 39 +     16677 AGTC-----A-A-AT-GAGTGT--------------------CATTTGT--AATAT------------------GCACACTT--AT--TT-T
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           24663 39 +     35983 AGTC-----A-A-AT-GAGTGT--------------------CATTTGT--AATAT------------------GCACACTT--AT--TT-T
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11991189 39 +  12117833 AGTC-----A-A-AT-GAGTGT--------------------CATTTGT--AATAT------------------GCACACTT--AT--TT-T
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46477949 39 +  46592721 AGTC-----A-A-AT-GAGTGT--------------------CATTTGT--AATAT------------------GCACACTT--AT--TT-T
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      41500 39 -     45581 AGTC-----A-A-AT-GAGTGT--------------------CATTTGT--AATAT------------------GCACACTT--AT--TT-T
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       2505 39 +     35577 AGTC-----A-A-AT-GAGTGT--------------------CATTTGT--AATAT------------------GCACACTT--AT--TT-T
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        2281 38 -     25661 AGTC-----A-A-AT-GAGTGT--------------------CATTTGT--AATAT------------------GCACACTT--A---TT-T
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        2260 39 -     17744 AGTC-----A-A-AT-GAGTGT--------------------CATTTGT--AATAT------------------GCACACTT--AT--TT-T
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        21875 39 +     37128 AGTC-----A-A-AT-GAGTGT--------------------CATTTGT--AATAT------------------GCACACTT--AT--TT-T
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           3032 38 -      6963 GGTA-----A-A-G--GAATGT--------------------CATTTCT--ACTAT------------------TTGCCCCA--AT--TT-T
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           59339 33 -     68416 -----------A-AT-GAGTGT--------------------CATTTCT--ACTAT------------------GTGCACCT--T---TT-T
i Cheirogaleus_major.k141_1157592                       I 1 C 0
s Cheirogaleus_medius.k141_133808                            8384 33 +     13308 -----------A-AT-GAGTGT--------------------CATTTCT--ACTTT------------------GTGCACCT--T---TT-T
i Cheirogaleus_medius.k141_133808                       I 1 C 0
s Cheracebus_lucifer.k141_619653                             5956 39 -     18223 AGTC-----A-C-AT-GAGTCT--------------------CGTTTCT--ACTAT------------------ACACACTT--AT--TT-T
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             22980 33 +     25473 -------------AC-GAGTCT--------------------CGTTTCT--ACTAT------------------ACACACTT--AT--TT-T
i Cheracebus_lugens.k141_203936                         I 4 C 0
s Cheracebus_regulus.k141_2128895                           42014 39 +     57117 AGTC-----A-C-AT-GAGTCT--------------------CGTTTCT--ACTAT------------------ACACACTT--AT--TT-T
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          46693 39 +     54541 AGTC-----A-C-AT-GAGTCT--------------------CATTTCT--ACTAT------------------ACACACTT--AT--TT-T
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15962015 39 +  43084221 ACTA-----A-A-AT-GCATG-----T---------------AATTTAT--ACTAT------------------ATGCACCT--GA--Tt-g
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         71500 39 +    196370 agtc-----a-a-at-gagtct--------------------catttct--actat------------------acacactt--at--tt-t
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          15680 39 +     40510 agtc-----a-a-at-gagtct--------------------catttct--actat------------------acacactt--at--tt-t
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15139395 39 -  15256731 AGTC-----A-A-AT-GAGTGT--------------------CATTTGT--AATAT------------------GCACACTT--AT--TT-T
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      34476 39 -     53260 AGTC-----A-A-AT-GAGTGT--------------------CATTTGT--AATAT------------------GCACACTT--AT--TT-T
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101145036 39 + 101219884 AGTC-----A-A-AT-GAGTGT--------------------CATTTGT--AATAT------------------GCACACTT--AT--TT-T
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                16738 38 -     21363 TATA-----T-A-G--GAAAGT--------------------CATTTCT--ACTAT------------------ATGCCCCT--AT--TT-T
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           762041 38 +    964067 TATA-----T-A-G--GAAAGT--------------------CACTTCT--ACTAT------------------ATGCCCCT--AT--TT-T
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10886805 39 +  10971483 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--AATAC------------------GCACACTT--AT--TT-T
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147664970 39 + 156195979 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--AATAC------------------GCACACTT--AT--TT-T
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            16955 39 +     23629 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--AATAT------------------GCACACTT--AT--TT-T
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60613867 39 +  78930452 AGTA-----A-A-CT-GAATGT--------------------CAGCTCT--ATTAT------------------GTGTACCA--AT--TT-C
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252          950 23 -      5782 -------------------------------------------ATTTCT--GCTAT------------------ATGCACCT--GT--T--T
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    I 6 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 278848  3 -    399297 ----------------------------------------------------------------------------------------TT-T
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53029509  3 +  72327488 ----------------------------------------------------------------------------------------TT-T
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            52298 36 -     70449 AGTT-----A-A-AT-GAATGT--------------------CTTTTC-----TCT------------------ATGCCCAT--AT--TT-C
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  208490 31 -    956709 --------------T-AAATGA--------------------TATTTCTATTAATC------------------GTAT---T--AC--TT-G
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 30936 32 -     67205 --------------T-GAGTA-----T---------------AATTCCT--ATGGC------------------ATGCACCT--AC--TT-T
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                18051 39 +     26546 AGTA-----A-A-AT-GAACA-----T---------------AACTTCT--ATTAT------------------ATACGCTT--AG--TT-T
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             59139 39 -    236241 AATG-----A-A-AT-GAGTG-----T---------------AATTCCT--ATTAT------------------ATACACTT--CA--TT-T
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          183917 38 -   6883506 AGTA-----A-A-G--GAATGT--------------------CATTTCT--ACTAT------------------TTGCCCCA--AT--TT-T
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16845190 39 +  31942871 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--ACTAT------------------GTGCACCT--AT--TT-T
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80037095 36 -  96802777 TGTA-----A-A-AT-GAATGT--------------------CAGTTCA--AGTAT------------------ATGCATCT--AT------
i Delphinapterus_leucas.KZ290064.1                      C 0 I 1
s Desmodus_rotundus.KZ672188.1                           18699074 39 -  18957592 AGTa-----a-a-at-caatgt--------------------tattttt--actat------------------atGTACCT--AT--TT-T
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 322803 39 +    993696 AGTA-----A-A-AT-GAATGT--------------------CACTTCT--ATGAC------------------ATGCACCT--AT--TT-T
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   3458 39 +    151128 AGTA-----A-A-AT-GAATGT--------------------CACTTCT--ATGAC------------------ATGCACCT--AT--TT-T
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   157279 39 +    228994 AGTA-----A-A-AT-GCGTG-----T---------------AATTTAT--ACTAT------------------ATGCACCT--GG--TT-T
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3656588 39 +   4240102 AATA-----A-A-AT-TAATGT--------------------CATTTCA--AGCAT------------------ATGCACAT--AT--TT-T
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 28231 39 +     28912 AATA-----A-A-AT-TAATGT--------------------CATTTCA--AACAT------------------ATGCACAT--AT--TT-T
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                36367 37 -     73477 AGTA-----A-A-AT-GAGTG-----T---------------AATTTCT--ATTAT------------------AT--ACTT--AG--TT-T
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22998885 22 -  44670279 --------------G-GATTTG--------------------TACTCCT-----AC------------------T---------AT--TT-T
i Echinops_telfairi.JH980316.1                          I 85 I 5
s Eidolon_helvum.KE772537.1                                 12532 38 +     24177 agta-----a-a-at-aaatat--------------------tatctct--acTAT------------------ATGCACCT--AT--T--T
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1491747 36 +   1727528 AGTG-----A-A-AT-GCATAT--------------------CATTCCA--AGTAT------------------ATGCACCa--at------
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 I 1
s Enhydra_lutris.KZ291749.1                              85872472 23 +  99434291 AGTA-----A-A-GC-AAATGT--------------------ATTATCA--GC---------------------------------------
i Enhydra_lutris.KZ291749.1                             C 0 I 3
s Eptesicus_fuscus.JH977687.1                             4704436 40 +   6522550 AATA-----AAA-AT-CAGTGT--------------------TATTTCT--ACTTT------------------ATGCAACT--AG--TT-T
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5853257 33 -   7175178 -------------AT-GAATGT--------------------CACTTCT--ACAGT------------------ATGCACCT--AT--TT-T
i Equus_asinus.JREZ01000062.1                           I 5 C 0
s Equus_caballus.CM000402.2                              13351762 33 +  41866177 -------------AT-GAATGT--------------------CACTTCT--ACAGT------------------ATGCACCT--AT--TT-T
i Equus_caballus.CM000402.2                             I 5 C 0
s Equus_przewalskii.ATBW01073585.1                          13251 33 +     92910 -------------AT-GAATGT--------------------CACTTCT--ACAGT------------------ATGCACCT--AT--TT-T
i Equus_przewalskii.ATBW01073585.1                      I 5 C 0
s Erinaceus_europaeus.JH835290.1                         11534531 38 +  16010500 AGTA-----A-A-AT-GGATGC---------------------ATTTCT--ACCAT------------------GTGTGTCT--AT--TT-C
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48774163 39 -  48907691 AGTC-----A-A-AT-GAGTGT--------------------CATTTGT--AATAT------------------GCACACTT--AT--TT-T
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          315313 36 +    330699 TGTA-----A-A-AT-GAATGT--------------------CATTTCA--AGTAT------------------ATACATCT--AT------
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 I 1
s Eubalaena_japonica.EubJap_flattened_line_7756             61764 36 +     89355 TGTA-----A-A-AT-GAATGT--------------------CATTTCA--AGTAT------------------ATGCATCT--AT------
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 I 1
s Eulemur_albifrons.k141_715837                              5390 38 +     13586 AGTC-----A-A-AT-GAATGT--------------------CATTTCT--ACCAT------------------GTGCA-CT--AT--TT-T
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               5321 38 -      6809 AGTC-----A-A-AT-GAATGT--------------------CATTTCT--ACCAT------------------GTGCA-CT--AT--TT-T
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            11798 38 +     36558 AGTC-----A-A-AT-GAATGT--------------------CATTTCT--ACCAT------------------GTGCA-CT--AT--TT-T
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             8119 38 +     60246 AGTC-----A-A-AT-GAATGT--------------------CATTTCT--ACCAT------------------GTGCA-CT--AT--TT-T
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                11595 38 +    109717 AGTC-----A-A-AT-GAATGT--------------------CATTTCT--ACCAT------------------GTGCA-CT--AT--TT-T
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               15981 38 +     16540 AGTC-----A-A-AT-GAATGT--------------------CATTTCT--ACCAT------------------GTGCA-CT--AT--TT-T
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                16256 38 +     27497 AGTC-----A-A-AT-GAATGT--------------------CATTTCT--ACCAT------------------GTGCA-CT--AT--TT-T
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           18713 38 +     26808 AGTC-----A-A-AT-GAATGT--------------------CATTTCT--ACCAT------------------GTGCA-CT--AT--TT-T
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                33451 38 +     46535 AGTC-----A-A-AT-GAATGT--------------------CATTTCT--ACCAT------------------GTGCA-CT--AT--TT-T
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              16175 38 -     29447 AGTC-----A-A-AT-GAATGT--------------------CATTTCT--ACCAT------------------GTGCA-CT--AT--TT-T
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129893221 19 - 159252932 AGTC-----A-A-AT-GAATGT--------------------CTTTT---------------------------------------------
i Felis_catus.CM001386.2                                C 0 I 13
s Felis_catus_fca126.CM031420.1                         129280313 19 - 158578461 AGTC-----A-A-AT-GAATGT--------------------CTTTT---------------------------------------------
i Felis_catus_fca126.CM031420.1                         C 0 I 13
s Felis_nigripes.FelNig_flattened_line_8080                 21453 19 +     52776 AGTC-----A-A-AT-GAATGT--------------------CTTTT---------------------------------------------
i Felis_nigripes.FelNig_flattened_line_8080             C 0 I 13
s Galago_moholi.ctg555                                     211216 39 -    847004 AGTC-----A-T-AT-GAATGT--------------------TATTTCT--AGTTT------------------GTGCACCT--AG--TT-T
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           13590 39 -     43889 AGTC-----A-T-AT-GAATGT--------------------TATTTCT--AGTTT------------------GTGCACCT--AG--TT-T
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          10664 39 +     27357 AATC-----A-T-AT-TAATGT--------------------TATTTCT--AGTTC------------------GTGCACCT--AT--TT-T
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               156570 39 +    324696 AGTA-----A-A-AT-GAATGT--------------------GATCTCT--ACAGT------------------ACTCACCA--AT--TT-T
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    181541 36 -    189561 AGTA-----A-A-AT-GCATAT--------------------CATTCCA--AGTAC------------------ATGCATCA--AT------
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 I 1
s Glis_glis.GliGli_scaffold_79770                           13348 39 -     18683 AGTA-----A-A-GT-GAATGC--------------------CATTTAT--GAAAC------------------ATGCACCC--A-TA-T-T
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               5637 39 -     14630 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--AATAT------------------ACACACTT--AT--TT-T
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119652737 39 - 195582420 agtc-----a-a-at-gagtgt--------------------catttct--aatat------------------acacactt--at--tt-t
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         2166 39 +     10286 AGTC-----A-A-AT-AAGTGT--------------------CATTTCT--ACCAT------------------GTGCACCT--AT--TT-T
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                              643 39 -     11661 AGTC-----A-A-AT-AAGTGT--------------------CATTTCT--ACCAT------------------GTGCACCT--AT--TT-T
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             5972 39 +     56096 AGTC-----A-A-AT-AAGTGT--------------------CATTTCT--ACCAT------------------GTGCACCT--AT--TT-T
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        29223 39 -     42470 AGTC-----A-A-AT-AAGTGT--------------------CATTTCT--ACCAT------------------GTGCACCT--AT--TT-T
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        45846 39 -     54384 AGTC-----A-A-AT-AAGTGT--------------------CATTTCT--ACCAT------------------GTGCACCT--AT--TT-T
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              17504 36 +     53719 AGTC-----A-A-AT-GAATGT--------------------CTTTTT-----TCT------------------ATGCACTT--AT--TT-C
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                27756 36 -     91191 AGTA-----A-A-AT-GCATAT--------------------CATTCCA--AGTAT------------------ATGCACCA--AT------
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 I 1
s Heterocephalus_glaber.JH602058.1                        2551371 38 +  31725842 -gaa-----a-a-at-aaatg---------------t-----aatttct--aCTAT------------------ATGcaact--at--tt-t
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               61206 39 +     73687 AGTG-----A-A-AG-GAACAC--------------------CACACCT--ACAGT------------------TTGTACCC--GT--AT-T
i Heterohyrax_brucei.HetBruBak_scaffold_25354           I 90 I 5
s Hippopotamus_amphibius.HipAmp_scaffold_1308              147403 30 +    277961 -------------AT-GCATGT--------------------CATTTCG--AGCAT------------------ATGCACCT--AT------
i Hippopotamus_amphibius.HipAmp_scaffold_1308           I 4 I 1
s Hipposideros_armiger.JXIK01001085.1                      278666 39 -    477199 AGTA-----A-A-AT-GAATGT--------------------TATTTCT--GCTAT------------------GTGCACTT--AT--TT-T
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              7812 39 -      9143 AGTA-----A-A-AT-GAATGT--------------------TATTTCT--GCTAT------------------GTGCACTT--AT--TT-T
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      5047 39 -   7690867 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--AATAT------------------ACACGCTT--AT--TT-T
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 17573 36 -     67322 AGTC-----A-A-AT-GAAAGT--------------------CTTTTC-----TCT------------------ATGAACCT--AT--TT-C
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19283 33 -    119109 AGTA-----A-A-AT-GAGTG-----T---------------AATTTTT--ATTGT------------------AT--------AG--CT-T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              5472 39 +      5897 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--AATAT------------------ACACACTT--AG--TT-T
i Hylobates_abbotti.k141_493872                         C 0 I 147
s Hylobates_agilis.k141_1621614                               140 39 -      1673 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--AATAT------------------ACACACTT--AG--TT-T
i Hylobates_agilis.k141_1621614                         I 61 C 0
s Hylobates_pileatus_b.ContigUN                                 14625018 39 -  25970782 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--AATAT------------------ACACACTT--AG--TT-T
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            2274 39 -      2977 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--AATAT------------------ACACACTT--AG--TT-T
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             34177 39 -     60944 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--AATAT------------------ACACACTT--AG--TT-T
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     6438 40 +     22540 AGTA-----A-A-A----ATGAA---T----T--T-------AATTTCT--ACTAT------------------ATGCACCT--AT--TT-T
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7126126 36 +  13083262 -TTA-----A-A-AC-AAATGT--------------------CATTT-T--CACAT------------------ATGCCCCT--GT--A--T
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_5141390                                    688 39 -      3181 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--ACTAT------------------GTGCACCT--AT--TT-T
i Indri_indri.k141_5141390                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               9300 36 +     17520 TGTA-----A-A-AT-GAATGT--------------------CAGTTCA--AGTAT------------------ATGAATCT--AT------
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 I 1
s Jaculus_jaculus.JH725517.1                              8566168 38 +  11848649 -ATA-----G-A-AT-GAATGC--------------------CATGTCT--CTTAT------------------ATGCACCT--AT--TT-C
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               23912 36 +     37189 TGTA-----A-A-AT-GAATGT--------------------CATTTCA--AGTAT------------------ATGCATCT--AT------
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 I 1
s Lagothrix_lagothricha.k141_12968                          50531 39 -    147782 AGTC-----A-A-AT-GAGTCT--------------------CATTTCT--AACAT------------------ACACACTT--AT--TT-T
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   114708 40 -    115756 AATA-----AAA-AT-TAGTGT--------------------TATTTCT--ACTTT------------------ATGCAACT--AG--TT-T
i Lasiurus_borealis.LasBor_scaffold_5102                C 0 I 887
s Lemur_catta.scaffold_1                                258407527 39 - 285822530 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--ACCAT------------------GTGCACCT--AT--TT-T
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        24273 38 +     39228 -GTC-----A-A-AG-GAGTGT--------------------CATTTCT--ACTAT------------------GTGCACCT--AT--TT-T
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            53657 38 +     63517 -GTC-----A-A-AG-GAGTGT--------------------CATTTCT--ACTAT------------------GTGCACCT--AT--TT-T
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        78921 38 +    116806 -GTC-----A-A-AT-GAGTGT--------------------TATTTCT--ACTAT------------------GTGCACCT--AT--TT-T
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     31912 38 -     33031 -GTC-----A-A-AG-GAGTGT--------------------CATTTCT--ACTAT------------------GTGCACCT--AT--TT-T
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3086265 23 -   3498232 AGTA-----A-A-GT-AAATGT--------------------ATTATCA--GC---------------------------------------
i Leptonychotes_weddellii.KB714749.1                    C 0 I 3
s Lepus_americanus.LepAme_scaffold_62849                    13539 36 +     22452 AGTA-----A-A-AT-AAATGT--------------------CATTTTT--GCTCT------------------ATGAACCT--AT------
i Lepus_americanus.LepAme_scaffold_62849                C 0 I 7
s Lipotes_vexillifer.KE558548.1                            136256 36 +   3060487 TGTA-----A-A-AT-GAATGT--------------------CAGTTCA--AGTAT------------------ATGCATCT--GT------
i Lipotes_vexillifer.KE558548.1                         C 0 I 1
s Lophocebus_aterrimus.ctg55                             19248674 39 +  19376315 AGTC-----A-A-AT-GAGTGT--------------------CATTTGT--AATAT------------------GCACACTT--AT--TT-T
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           10965 39 +     84689 AGTC-----A-A-AT-GAATGT--------------------TATTTTT--ATTTT------------------GTACATCT--AT--TT-T
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3778714 39 +   6799190 AGTC-----A-A-AT-GAATGT--------------------TATTTTT--ATTTT------------------GTACATCT--AT--TT-T
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20594583 39 -  62548349 agta-----A-A-AG-GAATGA--------------------CACTCCT--ACAAT------------------TTGTAACT--AT--TT-T
i Loxodonta_africana.GL010040.1                         I 88 I 5
s Lycaon_pictus.CM007556.1                               11088405 23 +  39895028 AGTG-----A-A-GT-GAATGA--------------------ATTTTTA--TC---------------------------------------
i Lycaon_pictus.CM007556.1                              C 0 I 3
s Macaca_arctoides.k141_2201161                             20409 39 +     74745 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--AATAT------------------GCACACTT--AT--TT-T
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12706866 39 +  12821369 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--AATAT------------------GCACACTT--AT--TT-T
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                2508 39 -      3136 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--AATAT------------------GCACACTT--AT--TT-T
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           47326 39 +     63263 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--AATAT------------------GCACACTT--AT--TT-T
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                 2031 39 -      2568 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--AATAT------------------GCACACTT--AT--TT-T
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 2616 39 -      7381 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--AATAT------------------GCACACTT--AT--TT-T
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  45833 39 -     79256 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--AATAT------------------GCACACTT--AT--TT-T
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196035940 39 + 196197964 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--AATAT------------------GCACACTT--AT--TT-T
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11446110 39 +  11645122 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--AATAT------------------GCACACTT--AT--TT-T
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   4780 39 -     46448 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--AATAT------------------GCACGCTT--AT--TT-T
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                2454 39 -     13212 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--AATAT------------------GCACACTT--AT--TT-T
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 16133 39 -     55006 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--AATAT------------------GCACACTT--AT--TT-T
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43841249 39 +  43892939 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--AATAT------------------GCACACTT--AT--TT-T
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               17419 39 -     24607 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--AATAT------------------GCACACTT--AT--TT-T
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               4785 39 -     27140 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--AATAT------------------GCACACTT--AT--TT-T
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43437834 39 -  43563597 AGTC-----A-A-AT-GAGTGT--------------------CATTTGT--AATAT------------------GCACACTT--AT--TT-T
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4450654 39 -   4543643 AGTC-----A-A-AT-GAGTGT--------------------CATTTGT--AATAT------------------GCACACTT--AT--TT-T
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            146338 39 +    252755 AGTA-----A-A-AT-GAATGT--------------------CACTTCT--ACTAT------------------ATGCATCT--AG--TT-T
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             36481 39 +     58827 AGTA-----A-A-AT-GAATGT--------------------CACTTCT--ACTAT------------------ATGCATCT--AG--TT-T
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36873950 36 +  64221397 -TTA-----A-A-AC-AAATGT--------------------CATTT-T--CACAT------------------ATGCACCT--GT--A--T
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       64709 39 -    234502 AGTA-----A-A-GT-GAATGT--------------------TATCTCT--TCTAC------------------CTGCACCC--AT--TT-T
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               13007  2 +     15977 ----------------------------------------------------------------------------------------T--T
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1047200  3 -  26018355 ----------------------------------------------------------------------------------------TT-T
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             1284 23 -     87323 AGTA-----A-A-GT-AAATGT--------------------ATTATCC--GC---------------------------------------
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 I 3
s Mesoplodon_bidens.MesBid_scaffold_227248                    588 36 -      1377 TGTA-----A-A-AT-GAATGT--------------------CATTTCA--AGTAT------------------ATGCATCT--AT------
i Mesoplodon_bidens.MesBid_scaffold_227248              C 0 I 1
s Microcebus_murinus.CM007691.1                          16510549 35 +  47401472 -----------A-AT-GAGTGT--------------------CATTTCT--ACTAT------------------GTGTACCTTTT---TT-T
i Microcebus_murinus.CM007691.1                         I 1 I 9
s Microgale_talazaci.MicTal_scaffold_34660                  34885 29 -     48017 AAGA-----A-G-AA-GAATTG--------------------AACTCCT-----AC------------------T---------AT--TT-T
i Microgale_talazaci.MicTal_scaffold_34660              I 80 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               22983 39 -     32043 AGTA-----A-A-AC-CAATGT--------------------TATTTCT--ATTAT------------------ATGTACCT--AT--TT-T
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8209955 39 +  10048721 agta-----a-a-at-aaatgt--------------------tatttct--actAT------------------ATGCATCT--AT--TT-T
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            34609 39 +     45743 AGTA-----A-A-AT-AAATGT--------------------TATTTCT--ACTAT------------------ATGCATCT--AT--TT-T
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         2383 39 +     29742 AGTC-----A-A-AT-GAGTGT--------------------CATTTGT--AATAT------------------GCACACTT--AT--TT-T
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        11781 23 -    104932 AGTA-----A-A-GT-AAATGT--------------------ATTATCA--GC---------------------------------------
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 I 3
s Mirza_zaza.k141_226143                                     5938 31 +      8497 -----------A-AT-GAGCGT--------------------CATTTCT--ACTAT------------------GTGTACCCT-T-------
i Mirza_zaza.k141_226143                                I 1 I 3
s Monodon_monoceros.MonMon_M_scaffold_5598                 146685 36 +    154973 TGTA-----A-A-AT-GAATGT--------------------CAGTTCA--AGTAT------------------ATGCATCT--AT------
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 I 1
s Mormoops_blainvillei.MorMeg_scaffold_2952                161501 39 +    265003 AGTA-----A-A-AT-CAATGT--------------------TATTTCT--GCTAT------------------ATATACCT--AT--TT-T
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  1771 36 -     19904 AGTA-----A-A-CT-GCATAT--------------------CATTCCA--AGTAT------------------ATGTACAA--AT------
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 I 1
s Mungos_mungo.MunMun_flattened_line_8729                  145199 36 -    168139 AGTC-----A-G-AT-GAGTGT--------------------CTTTTT-----CCT------------------ATGCACCT--AT--TT-C
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          19806 40 -    100666 AGTA-----AAA-AT-CAGTGT--------------------TATTTCT--ACTTT------------------ATGCAACT--AG--TT-T
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70766842  2 +  92629107 ----------------------------------------------------------------------------------------T--G
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75489902  2 +  98207768 ----------------------------------------------------------------------------------------t--t
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67556140  2 +  89017189 ----------------------------------------------------------------------------------------T--T
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74331078  1 +  97876770 ----------------------------------------------------------------------------------------T---
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             12106 37 +     98495 AGTA-----A-C-GC-AAATGT--------------------TGTTTAA--ACCAT------------------ATGCACCC--A----T-T
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4424653 23 -  28371801 AGTA-----A-A-GT-AAATGT--------------------ATTATCA--GT---------------------------------------
i Mustela_putorius.JH417978.1                           C 0 I 3
s Myocastor_coypus.MyoCoy_scaffold_3653                     90228 32 -    117718 --------------T-GAGTA-----T---------------AATTTCT--ACTGT------------------GTGCACCT--AG--TT-T
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               968117 40 +   8389877 AGTA-----AAA-AC-CAGTGT--------------------TATTTCT--ACTTT------------------ATGCAACT--AG--TT-T
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5019790 40 +   6462685 AGTA-----AAA-AT-CAGTGT--------------------TATTTCT--ACTTT------------------ATGCAACT--AG--TT-T
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3465699 40 -   3747815 AGTA-----AAA-AT-CAGTGT--------------------TATTTCT--ACTTT------------------ATGCAACT--AG--TT-T
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        10909 40 +     66751 AGTA-----AAA-AT-CAGTGT--------------------TATTTCT--ACTTT------------------ATGCAACT--AG--TT-T
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             5307 38 -      8794 AATA-----A-A-A--AAGTGT--------------------CATTTAT--ACTAT------------------ATGCCCCT--AT--TT-T
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            118956 37 +    362372 -GTA-----A-A-AC-AAATCC--------------------CATTTGT--ACTAC------------------ATCC-CCT--AC--CT-T
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               8890 39 +     48152 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--AATAT------------------GCACACTT--AT--TT-T
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4485172 22 -  14209539 AGTA-----A-A-GT-AAA-GT--------------------ATTATCA--GC---------------------------------------
i Neomonachus_schauinslandi.NINY01007774.1              C 0 I 3
s Neophocaena_asiaeorientalis.KZ688543.1                  3951297 36 -   4490290 TGTA-----A-A-AT-GACTGT--------------------CAGTTCA--AGTAT------------------ATGCATCT--AT------
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 I 1
s Noctilio_leporinus.NocLep_scaffold_12062                  49986 36 +     94413 AGTA-----A-A-AT-CAATGT--------------------TATATCT--A---T------------------ATGCACCT--AT--TT-T
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_720788                             272 39 -      1065 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--AATAT------------------ACACACTT--AT--TT-T
i Nomascus_annamensis.k141_720788                       C 0 C 0
s Nomascus_concolor.k141_226614                              1576 39 -      5092 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--AATAT------------------ACACGCTT--AT--TT-T
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_1004198                            143 39 +      1448 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--AATAT------------------ACACGCTT--AT--TT-T
i Nomascus_gabriellae.k141_1004198                      I 61 I 37
s Nomascus_siki_b.tarseq_80                             25294 39 -  18771707 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--AATAT------------------ACACGCTT--AT--TT-T
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  2997 39 +      4512 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--AATAT------------------ACACGCTT--AT--TT-T
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                31205 23 +   3668941 AGTG-----A-A-GT-GAATGT--------------------ATTTTTA--TC---------------------------------------
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 I 3
s Nycticebus_bengalensis.LG16                            65567409 39 -  95554990 AGTC-----A-A-AT-GAATGT--------------------TATTTCT--ATTTT------------------GTACACCT--AT--TT-T
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            4135 39 +      6470 AGTC-----A-A-AT-GAATGT--------------------TATTTCT--ATTTT------------------GTACACCT--AT--TT-T
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65669744 39 +  89412551 AGTC-----A-A-AT-GAATGT--------------------TATTTCT--ATTTT------------------GTACACCT--AT--TT-T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4996286 39 -  23139505 agta-----a-a-at-aaatgt--------------------catttgt--GCTGT------------------AGGCACCT--AT--TT-T
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3685767 32 +  10294119 --------------T-GAGTA-----T---------------AATTTCT--ATGGC------------------ATGCACCT--AC--TT-T
i Octodon_degus.JH651621.1                              C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  37401  3 +     62360 ----------------------------------------------------------------------------------------TT-T
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             679838 23 -   3126709 AGTA-----A-A-GT-AAATGT--------------------ATTATCA--GC---------------------------------------
i Odobenus_rosmarus.KB229369.1                          C 0 I 3
s Odocoileus_virginianus.KZ101650.1                       1079977 36 +   1425656 AGTA-----A-A-AT-ACATAT--------------------CATTCCA--AGTAT------------------ATGCACCA--AT------
i Odocoileus_virginianus.KZ101650.1                     C 0 I 1
s Okapia_johnstoni.LVCL01S0017931.1                         37269 36 +     78940 AGTA-----A-A-AT-GCGTAT--------------------CATTCCA--AGTAT------------------ATGCACCA--AT------
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 I 1
s Orcinus_orca.KB316965.1                                 7224982 36 -   7562323 TGTA-----A-A-AT-GAATGT--------------------CAGTTCA--AGTAT------------------ATGCATCT--AT------
i Orcinus_orca.KB316965.1                               C 0 I 1
s Orycteropus_afer.OryAfe_flattened_line_13509              57880 36 -     66828 AGGA-----A-A-AA-GAATGT--------------------CACTCTT-----AT------------------TTGCATAT--AT--TT-T
i Orycteropus_afer.OryAfe_flattened_line_13509          I 89 I 5
s Oryctolagus_cuniculus.CM000803.1                      141876573 39 + 163896628 AGTA-----A-A-AT-AAATGT--------------------CGTTTCT--GCTCT------------------ATGAACCT--AT--TT-T
i Oryctolagus_cuniculus.CM000803.1                      C 0 I 4
s Otocyon_megalotis.JAEUCK010005121.1                      308489 23 -    505867 AGTG-----A-A-GT-GAATGT--------------------ATTTTTA--TC---------------------------------------
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 I 3
s Otolemur_crassicaudatus.k141_505435                        1034 39 -     53940 AGAC-----A-T-AT-GAATGG--------------------TATTTCT--AGTTT------------------GTGCACCT--AT--TT-T
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18009014 39 -  38779656 AGAC-----A-T-AT-GAATGT--------------------TATTTCT--AGTTT------------------GTGCACCT--AT--TT-T
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134077547 36 - 275406953 AGTA-----A-A-AT-GCATAT--------------------CATTCCA--AGTGT------------------ATGCACCA--AT------
i Ovis_aries.CM001582.2                                 C 0 I 1
s Ovis_canadensis.OviCan_scaffold_6251                      78762 36 +    140051 AGTA-----A-A-AT-GCATAT--------------------CATTCCA--AGTAT------------------ATGCACCA--AT------
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 I 1
s Pan_paniscus.CM003386.1                               127575003 39 - 205426864 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--AATAT------------------ACACACTT--AT--TT-T
i Pan_paniscus.CM003386.1                               I 35 C 0
s Pan_troglodytes.CM009241.2                            120152157 39 - 196562556 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--AATAT------------------ACACACTT--AT--TT-T
i Pan_troglodytes.CM009241.2                            I 14 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  34614 36 +    295523 AGTC-----A-A-AT-GAATGT--------------------CTTTTC-----TTT------------------ATGCACCT--AT--TT-C
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3638348 36 +  18214204 AGTC-----A-A-AT-GAATGT--------------------CTTTTC-----TTT------------------ATGCACCT--AT--TT-C
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5028023 36 -   6340057 AGTC-----A-A-AT-GAATGT--------------------CTTTTC-----TTT------------------ATGCGCCT--AT--TT-C
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1066397 36 -   1292953 AGTA-----A-A-AT-GCGTAT--------------------TATTCCA--AGTAT------------------ATGCACCA--AT------
i Pantholops_hodgsonii.KE114631.1                       C 0 I 1
s Papio_anubis.CM001492.2                               188156621 39 - 188283584 AGTC-----A-A-AT-GAGTGT--------------------CATTTGT--AATAT------------------GCACACTT--AT--TT-T
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             4938 39 +      5367 AGTC-----A-A-AT-GAGTGT--------------------CATTTGT--AATAT------------------GCACACTT--AT--TT-T
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47514006 39 +  47705337 AGTC-----A-A-AT-GAGTGT--------------------CATTTGT--AATAT------------------GCACACTT--AT--TT-T
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 67982 39 -    104429 AGTC-----A-A-AT-GAGTGT--------------------CATTTGT--AATAT------------------GCACACTT--AT--TT-T
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    6518 39 +     14967 AGTC-----A-A-AT-GAGTGT--------------------CATTTGT--AATAT------------------GCACACTT--AT--TT-T
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 2377 39 -      7628 AGTC-----A-A-AT-GAGTGT--------------------CATTTGT--AATAT------------------GCACACTT--AT--TT-T
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    116076 36 -    135482 AGTC-----A-A-AT-GAATGT--------------------CTTTTC-----TCT------------------ATGTACCT--AT--AT-C
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           5725 37 -     23713 AGTC-----A-A-AT-GAA--T--------------------TATTTCT--ATTTT------------------GTGCACCT--AT--TT-G
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            25038 37 -     27972 AGTC-----A-A-AT-GAA--T--------------------TATTTCT--ATTTT------------------GTGCACCT--AT--TT-G
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      44869 39 -     45160 AGTA-----A-A-AT-CAACTT--------------------TATTCCT--GTTAC------------------ATGCACCT--GT--TT-T
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4950649  3 -   8017169 ----------------------------------------------------------------------------------------TT-T
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    12723 36 -     36578 AGTG-----A-A-AT-GCATG-----T---------------AATTCCT--ACTAC------------------GTGCACCT--At------
i Petromus_typicus.PetTyp_scaffold_33007                C 0 I 465
s Phocoena_phocoena.PhoPho_flattened_line_11948            121587 36 -    122454 TGTA-----A-A-AT-GACTGT--------------------CAGTTCA--AGTAT------------------ATGCATCT--AT------
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 I 1
s Piliocolobus_badius.k141_1987485                           2404 39 -      5908 AGTC-----A-G-AT-GAGTGT--------------------CATTTCT--AATAT------------------GCACACTT--AT--TT-T
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       3028 39 -     17985 AGTC-----A-G-AT-GAGTGT--------------------CATTTCT--AATAT------------------GCACACTT--AT--TT-T
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            2395 39 +      7694 AGTC-----A-G-AT-GAGTGT--------------------CATTTCT--AATAT------------------GCACACTT--AT--TT-T
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26740873 39 +  26888534 AGTC-----A-G-AT-GAGTGT--------------------CATTTCT--AATAT------------------GCACACTT--AT--TT-T
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            97734 40 +    112873 AATA-----AAA-AT-CAGTGT--------------------TATATCT--ATCTT------------------ATGCAACA--AG--TT-T
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             44137 39 -     61926 agtc-----a-a-at-gagtct--------------------catttct--actat------------------acacactt--at--tt-t
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        25522 39 +     78826 AGTC-----A-A-AT-GAGTCT--------------------CATTTCT--ACTAT------------------ACACACTT--AT--TT-T
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              9569 39 -     15800 AGTC-----A-A-AT-GAGTCT--------------------CATTTCT--ACTAT------------------ACACACTT--AT--TT-T
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        12768 39 -     16101 AGTC-----A-A-AT-GAGTCT--------------------CATTTCT--ACTAT------------------ACACACTT--AT--TT-T
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          5996 39 +      9673 AGTC-----A-A-AT-GAGTCT--------------------CATTTCT--ACTAT------------------ACACACTT--AT--TT-T
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13474996 39 -  19735023 agtc-----a-a-at-gagtct--------------------catttct--actat------------------acacactt--at--tt-t
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           13899 39 -     31692 AGTC-----A-A-AT-GAGTCT--------------------CATTTCT--ACTAT------------------ACACACTT--AT--TT-T
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           5673 36 +     21690 TGTT-----A-A-AT-GAATGT--------------------CATTTCA--AGTAT------------------ATGCATCT--AT------
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 I 1
s Plecturocebus_bernhardi.k141_959214                       23239 39 +     44506 AGTC-----A-A-AT-GAGTCT--------------------CATTTCT--ACTAT------------------ACACACTT--AT--TT-T
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        23451 39 +     67491 AGTC-----A-A-AT-GAGTCT--------------------CATTTCT--ACTAT------------------ACACACTT--AT--TT-T
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      13691 39 -     98129 AGTC-----A-A-AT-GAGTCT--------------------CATTTCT--ACTAT------------------ACACACTT--AT--TT-T
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     23291 39 +    147771 AGTC-----A-A-AT-GAGTCT--------------------CATTTCT--ACTAT------------------ACACACTT--AT--TT-T
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        23548 39 -     23762 AGTC-----A-A-AT-GAGTCT--------------------CATTTCT--ACTAT------------------ACACACTT--AT--TT-T
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          4010 39 -     55515 AGTC-----A-A-AT-GAGTCT--------------------CATTTCT--ACTAT------------------ACACACTT--AT--TT-T
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         23364 39 +    152463 AGTC-----A-A-AT-GAGTCT--------------------CATTTCT--ACTAT------------------ACACACTT--AT--TT-T
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       1081 39 -    119457 AGTC-----A-A-AT-GAGTCT--------------------CATTTCT--ACTAT------------------ACACACTT--AT--TT-T
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         13087 39 +    134592 AGTC-----A-A-AT-GAGTCT--------------------CATTTCT--ACTAT------------------ACACACTT--AT--TT-T
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          23674 39 -     75465 AGTC-----A-A-AT-GAGTCT--------------------CATTTCT--ACTAT------------------ACACACTT--AT--TT-T
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              187523 39 -    373494 AGTC-----A-A-AC-GAGTGC--------------------CATTTCT--AATAT------------------ACACACTT--AT--TT-T
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19808171 39 +  19899266 AGTC-----A-A-AC-GAGTGT--------------------CATTTCT--AATAT------------------ACACACTT--AT--TT-T
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               6134 39 -     15069 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--AATAT------------------GCACACTT--AT--TG-T
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              6264 39 +     14865 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--AATAT------------------GCACACTT--AT--TG-T
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                2316 39 -      9567 AGTG-----A-A-AG-GAACAC--------------------CACACCT--ACAGT------------------TTGTACCC--GT--AT-T
i Procavia_capensis.ProCapCap_scaffold_149274           I 90 I 5
s Prolemur_simus.MPIZ01000048.1                           6848904 39 +  12164890 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--ACCAT------------------GTGTACCT--AT--TT-T
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     17213 39 -     30946 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--ACTAT------------------GTGCACCT--AT--TT-T
i Propithecus_coquerelli.NW_012147863.1                 I 637 C 0
s Propithecus_coronatus.k141_1353159                         3970 39 +     11805 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--ACTAT------------------GTGTACCT--AT--TT-T
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           43313 39 +     52369 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--ACTAT------------------GTGCACCT--AT--TT-T
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         35700 39 -     44753 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--ACTAT------------------GTGCACCT--AT--TT-T
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            17624 39 +     27322 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--ACTAT------------------GTGCACCT--AT--TT-T
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       17260 39 -     53241 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--ACTAT------------------GTGCACCT--AT--TT-T
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         39524 39 -     48185 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--ACTAT------------------GTGCACCT--AT--TT-T
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           34556  2 +     77221 ----------------------------------------------------------------------------------------T--T
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            4146 39 -     27784 CGTA-----A-A-AT-CAATGT--------------------TATTTCT--ACTAT------------------ATGTACCT--AT--TT-T
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        246963 23 -    344369 AGTA-----A-A-GT-AAATGT--------------------ATTATCA--GC---------------------------------------
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 I 3
s Pteropus_alecto.KB031157.1                             13246263 39 -  17261082 agta-----a-a-at-aaatat--------------------tatctct--aCTAT------------------ATGCACCT--AT--TT-T
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             604214 39 -   3946241 agta-----a-a-at-aaatat--------------------tatctct--aCTAT------------------ATGCACct--at--tt-t
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131534601 36 - 161321710 AGTC-----A-A-AT-GAATGT--------------------CTTTTC-----TTT------------------ATGCACCT--AT--TT-C
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             30255 39 +     56732 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--AATAT------------------GCACACTT--AT--TT-T
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6806743 39 +   6970761 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--AATAT------------------GCACACTT--AT--TT-T
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             6134 39 +     18040 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--AATAT------------------GCACACTT--AT--TT-T
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rattus_norvegicus.chr11                                13915849  2 +  90463843 ----------------------------------------------------------------------------------------T--T
i Rattus_norvegicus.chr11                               C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                16056 54 +     68503 AGTA-----A-A-AT-ACATAT--------------------CATTCTA--AATGTACATATAGAATACATATCATGCACCA--AT------
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 I 1
s Rhinolophus_sinicus.LVEH01000179.1                      1788090 39 +   2252614 AGTA-----A-A-AT-GAATGT--------------------TATTTCT--GCTAT------------------ATGCACCT--AT--TT-T
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                             546 39 -     17045 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--AATAT------------------GCACACTT--AT--TT-T
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206378023 39 - 206558726 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--AATAT------------------GCACACTT--AT--TT-T
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44856937 39 -  45163003 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--AATAT------------------GCACACTT--AT--TT-T
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                19597 39 +    109198 AGTA-----A-A-AT-AAATAT--------------------TGTCTCT--ACTAT------------------ATGCACCT--AT--TT-T
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       8223 36 +     12214 AGTA-----A-A-AT-GCATAT--------------------TATTCCA--AGTAT------------------ATGCACCA--AT------
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 I 1
s Saimiri_boliviensis.NW_024100938.1                     15673101 39 -  43202129 AGTC-----A-A-AT-GAGTCT--------------------CTTTTCT--ACTAT------------------ACACACTT--AT--TT-T
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        5014 39 +     34089 AGTC-----A-A-AT-GAGTCT--------------------CTTTTCT--ACTAT------------------ACACACTT--AT--TT-T
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              4956 39 -     60842 AGTC-----A-A-AT-GAGTCT--------------------CTTTTCT--ACTAT------------------ACACACTT--AT--TT-T
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              5049 39 +     67014 AGTC-----A-A-AT-GAGTCT--------------------CTTTTCT--ACTAT------------------ACACACTT--AT--TT-T
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              5027 39 +     60816 AGTC-----A-A-AT-GAGTCT--------------------CTTTTCT--ACTAT------------------ACACACTT--AT--TT-T
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 4964 39 -     76454 AGTC-----A-A-AT-GAGTCT--------------------CTTTTCT--ACTAT------------------ACACACTT--AT--TT-T
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17341689 39 -  30362882 AGTC-----A-A-AT-GAACCT--------------------CATTTCT--ACTAT------------------ACACACTT--AT--TT-T
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         21050 39 -     62485 AGTC-----A-A-AT-GAACCT--------------------CATTTCT--ACTAT------------------ACACACTT--AT--TT-T
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   32568 33 -    114521 CGTA-----A-A-CC-AAATGT--------------------CCTTTCT--ATTAT------------------ATGTATT-----------
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        3747 39 +     15331 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--AATAT------------------GCACACTT--AT--TT-T
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       9140 39 +     20762 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--AATAT------------------GCACACTT--AT--TT-T
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         119143 39 +    130994 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--AATAT------------------GCACACTT--AT--TT-T
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           37929 39 +     46263 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--AATAT------------------GCACACTT--AT--TT-T
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     31049 39 +     42640 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--AATAT------------------GCACACTT--AT--TT-T
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        14089 39 +     30600 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--AATAT------------------GCACACTT--AT--TT-T
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  100597  2 -    120886 ----------------------------------------------------------------------------------------T--T
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            19152 40 +    739146 AGTA-----A-A-AT-AAATTT--------------------AATTTCT--ACTAT------------------ATGCAGTT--AT--TTTT
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17766347 30 -  27805282 AATA-----A-A-AT-GAATGT--------------------TATTTCT--ATGAT------------------ATGC--------------
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2240042 36 +   2842873 -TTA-----A-A-AC-AAATGT--------------------CATTT-T--CACAT------------------ATGCACCT--GT--A--T
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             235082 23 -    276980 AGTA-----A-A-GT-AAATGT--------------------ATTATCA--GC---------------------------------------
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 I 3
s Suricata_suricatta.SurSur_flattened_line_20339            27859 33 +     62062 AGTC-----A-A-AT-GAGTGT--------------------CTTTTT-----TCT------------------ATGCACCT--AT------
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 I 3
s Sus_scrofa.CM000824.4                                 189272142 31 + 218635234 TGTA-----A-A-GT-GAATGT-------------------------CG--AGTAT------------------AGACACCT--AT------
i Sus_scrofa.CM000824.4                                 C 0 I 13
s Symphalangus_syndactylus.tarseq_24                        15279 39 -  13920577 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--AATAT------------------ACACACTT--AG--TT-T
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                 525 39 +     20549 AGTA-----A-A-AT-CAATGT--------------------TATTTCT--ACTAT------------------ATGTACCT--AT--TT-T
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               14971 39 +     45698 AATA-----A-AAA--AAGTGT--------------------CATTTAT--ACTAT------------------ATGCCCCT--AT--TT-T
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      807392 39 +   1148477 AGTA-----A-A-AT-GAATGT--------------------CACTTCT--ACAAT------------------ATGCACCT--AT--TT-T
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  58103 39 +     99546 AGTA-----A-A-AT-GAATGT--------------------CACTTCT--ACGAT------------------ATGCACCT--AT--TT-T
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               26818 39 +     42269 AGTC-----A-A-AG-GAGTGA--------------------CATTTCA--ATTAT------------------GCACACCT--AT--TT-T
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               60134 39 +     65473 AGTC-----A-A-AG-GAGTGA--------------------CATTTCA--ATTAT------------------GCACACCT--AT--TT-T
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194008143 39 - 194193292 AGTC-----A-A-AT-GAGTGT--------------------CATTTGT--AATAT------------------GCACACTT--AT--TT-T
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             38988 40 -     47444 AGCA-----A-A-AT-GCATG-----T---------------AATTTCT--ACTAT------------------ATTCACCT--AT--TTCT
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 I 9
s Tolypeutes_matacus.TolMat_scaffold_269431                  5791 38 +      6782 AGTA-----A-A-G--GAATGT--------------------TATTTCC--ACTAT------------------TTGCCCCA--AT--TT-T
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  136143 39 -    259118 AGTA-----A-A-AT-CAATGT--------------------TATTTCT--ACTAT------------------ATGTACCT--AT--TT-T
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        27245 39 +     38948 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--AATAT------------------GCACACTT--AT--TT-T
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   20977 39 -     32910 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--AATAT------------------GCACACTT--AT--TT-T
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      2363 39 -     12939 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--AATAT------------------GCACACTT--AT--TT-T
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       2299 39 -     14244 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--AATAT------------------GCACACTT--AT--TT-T
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           43698 39 -     54611 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--AATAT------------------GCACACTT--AT--TT-T
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        1501 39 -     11566 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--AATAT------------------GCACACTT--AT--TT-T
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     3678 39 -     15592 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--AATAT------------------GCACACTT--AT--TT-T
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          2334 39 +     14371 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--AATAT------------------GCACACTT--AT--TT-T
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                    615 39 +     12481 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--AATAT------------------GCACACTT--AT--TT-T
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                         491 39 -     24393 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--AATAT------------------GCACACTT--AT--TT-T
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       5737 39 -     28054 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--AATAT------------------GCACACTT--AT--TT-T
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44660537 39 -  44834318 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--AATAT------------------GCACACTT--AT--TT-T
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       2845 39 +     13828 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--AATAT------------------GCACACTT--AT--TT-T
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   5449 36 +     90398 AGTC-----A-A-AT-GAGTAT--------------------CATTTCA--GGGAT------------------ATGCACCA--AT------
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 I 1
s Trichechus_manatus.JH594618.1                          16085262 35 +  31416278 AGTA-----A-A-AG-GAACG------------------------TCCT--ACTAT------------------TTGTACCT--AT--TT-T
i Trichechus_manatus.JH594618.1                         I 90 I 5
s Tupaia_chinensis.KB320831.1                             2793187 38 -   3938065 AGTA-----A-A-GT-GAATGT--------------------CATTTCC--ACTCG------------------A-GCACCT--AT--TT-T
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    5387 38 +     13056 AGTA-----A-A-GT-GAATGT--------------------CATTTCC--ACTCG------------------A-GCACCT--AT--TT-T
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69313698 36 -  96451834 TGTA-----A-A-AT-GAATGT--------------------CAGTTCA--AGTAT------------------ATGCATCT--AT------
i Tursiops_truncatus.MRVK01000923.1                     C 0 I 1
s Uropsilus_gracilis.UroGra_scaffold_69449                   1600 39 +     10241 AGTA-----A-A-CT-GAATGT--------------------CATTTCT--ATTAT------------------ATGTACCT--AT--TT-T
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6515092 23 +  28682327 AGCA-----A-A-G-GGAGTGT--------------------ATTATCA--GC---------------------------------------
i Ursus_maritimus.KK498671.1                            C 0 I 3
s Varecia_rubra.k141_432109                                  5601 39 -     20643 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--ACCAT------------------GTGCACCT--AT--TT-T
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             25142 39 -     33872 AGTC-----A-A-AT-GAGTGT--------------------CATTTCT--ACCAT------------------GTGCACCT--AT--TT-T
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1524944 39 -   2331223 AGTG-----A-A-GT-GAATAT--------------------CATTCTG--AGTAT------------------ATGCATCT--AT--TT-T
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                138586 23 -    281493 AGTG-----A-A-GT-GAATGT--------------------ATTTTTA--TC---------------------------------------
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 I 3
s Xerus_inauris.XerIna_scaffold_7898                       127156 37 -    134049 -GTA-----A-A-AC-AAATGT--------------------CATTT-T--CACAT------------------ATGCACCC--AT--AT-T
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        214565 23 -    227762 AGTA-----A-A-GT-AAATGT--------------------ATTATCA--GG---------------------------------------
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 I 3
s Zapus_hudsonius.ZapHud_scaffold_64392                     15477 41 -     20485 AATACGCTCA-T-AT-GAATGC--------------------CATTTCT--ACTAT------------------GGACACCT--AT------
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 I 3
s Ziphius_cavirostris.ZipCav_flattened_line_127025           7197 36 -      8775 TGTA-----A-A-AT-GAATGT--------------------CATTTCA--AGTAT------------------ATGCATCT--AT------
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 I 1
e Macroglossus_sobrinus.MacSob_scaffold_879                701732 90 +    802869 I
e Elephantulus_edwardii.JH947210.1                        7816099 793 +  15467074 I
e Crocidura_indochinensis.CroInd_scaffold_848148              199  0 +      1327 C
e Hylobates_klossii.k141_285563                               343 193 +      1026 I
e Microtus_ochrogaster.CM001673.1                        22820341  4 -  98408828 I
e Ondatra_zibethicus.OndZib_scaffold_6821                  125594  4 +    145789 I
e Graphiurus_murinus.GraMur_scaffold_4493                   77863  0 +    118900 C
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I
e Ellobius_talpinus.LOJH01090055.1                           7151  4 -      7838 I
e Ellobius_lutescens.LOEQ01003611.1                        240029  1 -    369425 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               12163 28 +    209709 TCAA--GA---GT-T-------G---AT------------------A-------A---TAAGAAGT-AA-AAAT
s Acinonyx_jubatus.LLWD01000356.1                         2034298 28 +   3721120 TCAA--GA---GC-T-------g---at------------------a-------a---tacaaaggaaa-aa-t
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    112878 22 -    189883 GCAA--AA---TT-T-------G---AC------------------A-------A---T-----GT-AA-TA-T
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10657625 38 +  23371972 TGAA--AA---AT-A-------G---GT------------------GTATATAGAAGAGACAAAGTAAA-AT-T
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 3 C 0
s Ailurus_fulgens.LNAC01000003.1                          7094973 38 -  16596857 TGAA--AA---AT-A-------G---GG------------------GCATATAGAAGAGACGAAGTAAA-AT-T
i Ailurus_fulgens.LNAC01000003.1                        I 3 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   17194 27 -     22067 TCAA--GA---GC-T-------G---AT------------------A-------A---TACAAAGT-GA-TA-T
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   1673 28 -     60446 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         2393 28 -     29318 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         1328 28 +     38766 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          2287 28 -     80423 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            10590 28 -     18050 TCAA--GA---GT-T-------G---AT------------------A-------A---TACAACAT-AA-AAAT
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_1710068                                302 31 +      1555 TCAA--GA---GT-T-------GTTGAT------------------A-------A---TACAACAT-AA-AAAT
i Alouatta_caraya.k141_1710068                          C 0 C 0
s Alouatta_discolor.k141_811576                             11263 28 -     21359 TCAA--GA---GT-T-------G---AT------------------A-------A---TACAACAT-AA-AAAT
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                 881 31 +      2129 TCAA--GAGTTGT-T-------G---AT------------------A-------A---TACAACAT-AA-AAAT
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_2177643                           265 31 -      1868 TCAA--GAGTTGT-T-------G---AT------------------A-------A---TACAACAT-AA-AAAT
i Alouatta_macconnelli.k141_2177643                     C 0 C 0
s Alouatta_nigerrima.k141_3537692                             314 31 +      1660 TCAA--GAGTTGT-T-------G---AT------------------A-------A---TACAACAT-AA-AAAT
i Alouatta_nigerrima.k141_3537692                       C 0 C 0
s Alouatta_palliata.k141_2764429                              232 28 -      1480 TCAA--GA---GT-T-------G---AT------------------A-------A---TACAACAT-AA-AAAT
i Alouatta_palliata.k141_2764429                        C 0 I 6
s Alouatta_puruensis.k141_1284840                            4307 31 -      4927 TCAA--GA---GT-T-------GTTGAT------------------A-------A---TACAACAT-AA-AAAT
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_1531728                             447 28 -      1692 TCAA--TA---GT-T-------G---AT------------------A-------A---TACAACAT-AA-AAAT
i Alouatta_seniculus.k141_1531728                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3520433 28 +   4113121 taaa--ga---at-t-------g---aa------------------a-------a---caCAAAGTAAA-AA-T
i Ammotragus_lervia.NIVO01013474.1                      I 1 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      390641 28 -    631301 TTAA--GA---GG-T-------G---AT------------------A-------A---TGCAAAGTAGA-AA-T
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            31014 28 +     33004 TAAA--GA---AT-T-------G---AA------------------A-------A---CACAAAGTAAA-AA-T
i Antilocapra_americana.AntAmePen_scaffold_42841        I 1 C 0
s Aotus_azarae.k141_3170768                                 62942 28 +     78111 TCAA--GA---GT-T-------G---AT------------------A-------A---TACAATGT-AA-AAAT
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            5884 28 +     22701 TCAA--GA---GT-T-------G---AT------------------A-------A---TACAATGT-AA-AAAT
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5749841 28 +   9889416 TCAA--GA---GT-T-------G---AT------------------A-------A---TACAATGT-AA-AAAT
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             6430 28 -    104377 TCAA--GA---GT-T-------G---AT------------------A-------A---TACAATGT-AA-AAAT
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               6432 28 +     23246 TCAA--GA---GT-T-------G---AT------------------A-------A---TACAATGT-AA-AAAT
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     3987 27 +      5067 TCAA--GA---TC-T-------G---TT------------------A-------A---TAGAAAGT-AA-TG-T
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        1370  9 +      9265 ---------------------------------------------------------------AAT-AA-AATC
i Arctocebus_calabarensis.k141_587554                   I 9 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 9047 28 -     29036 TCCA--GA---GG-T-------G---AT------------------A-------A---TGCAAAGTAGA-AA-T
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9539701 28 +  39197703 TCAA--GA---GC-T-------G---AT------------------A-------A---TACAACAT-AA-AAAT
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             60972 28 +     85812 TCAA--GA---GC-T-------G---AT------------------A-------A---TACAACAT-AA-AAAT
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                11985 28 +     89302 TCAA--GA---GC-T-------G---AT------------------A-------A---TACAACAT-AA-AAAT
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             16488 28 -     58268 TCAA--GA---GC-T-------G---AT------------------A-------A---TACAACAT-AA-AAAT
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             64480 28 +    119057 TCAA--GA---GC-T-------G---AT------------------A-------A---TACAACAT-AA-AAAT
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               6451 28 -     25888 TCAA--GA---GC-T-------G---AT------------------A-------A---TACAACAT-AA-AAAT
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 7094  7 -     16375 TCA----A---GT-T-----------------------------------------------------------
i Avahi_laniger.k141_2840928                            C 0 I 9
s Avahi_peyrierasi.k141_798820                                713  7 +      6337 TCA----A---GT-T-----------------------------------------------------------
i Avahi_peyrierasi.k141_798820                          C 0 I 9
s Balaenoptera_acutorostrata.KI537095.1                  26380508 28 +  51448160 TTAA--AG---GT-t-------g---aa------------------a-------a---cacaaagtaaa-aa-g
i Balaenoptera_acutorostrata.KI537095.1                 I 1 C 0
s Balaenoptera_bonaerensis.DF502048.1                        5680 28 -     13118 TTAA--AG---GT-t-------g---aa------------------a-------a---cacaaagtaaa-aa-g
i Balaenoptera_bonaerensis.DF502048.1                   I 1 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   43503 28 -     72089 TAAA--GA---AT-T-------G---AA------------------A-------A---CACAAAGTAAA-AA-T
i Beatragus_hunteri.BeaHun_scaffold_21644               I 1 C 0
s Bison_bison.KN264915.1                                  6560166 28 +   6870073 TAAA--GA---AT-T-------G---AA------------------A-------A---CACAAAGTAAA-AA-T
i Bison_bison.KN264915.1                                I 1 C 0
s Bos_indicus.CM003021.1                                138140275 28 - 161108492 TAAA--GA---AT-T-------G---AA------------------A-------A---CACAAAGTAAA-AA-T
i Bos_indicus.CM003021.1                                I 1 C 0
s Bos_mutus.JH883513.1                                     572816 28 -    998990 TAAA--GA---AT-T-------G---AA------------------A-------A---CACAAAGTAAA-AA-T
i Bos_mutus.JH883513.1                                  I 1 C 0
s Bos_taurus.CM000177.6                                 136296008 28 - 158972876 TAAA--GA---AT-T-------G---AA------------------A-------A---CACAAAGTAAA-AA-T
i Bos_taurus.CM000177.6                                 I 1 C 0
s Bubalus_bubalis.KI419065.1                              1233087 28 -   1914593 TAAA--GA---AT-T-------G---AA------------------A-------G---CACAAAGTAAA-AA-T
i Bubalus_bubalis.KI419065.1                            I 1 C 0
s Cacajao_ayresi.k141_724503                               114338 28 -    171031 tcaa--ga---gt-t-------g---at------------------a-------a---tacaacgt-aa-aaat
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 13367 28 +    125063 tcaa--ga---gt-t-------g---at------------------a-------a---tacaacgt-aa-aaat
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                15410 28 -    216513 tcaa--ga---gt-t-------g---at------------------a-------a---tacaacgt-aa-aaat
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        7953 28 -    134917 tcaa--ga---gt-t-------g---at------------------a-------a---tacaacgt-aa-aaat
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3219878 28 -   8989139 tcaa--ga---gt-t-------g---aa------------------a-------a---tacaaagtaaa-aa-t
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           397579 28 -  15254737 tcaa--ga---gt-t-------g---aa------------------a-------a---tacaaagtaaa-aa-c
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2973315 28 +   6889770 TCAA--GA---Gt-t-------g---aa------------------a-------a---tacaaagtaaa-aa-t
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11519774 35 +  39901454 TGAA--AA---AT-A-------G---GT------------------GCATATATA---GACAAAGTAAA-AC-T
i CanFam4.chr31                                         I 3 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   14799 35 +     87036 TGAA--AA---AT-A-------G---GT------------------GCATATATA---GACAAAGTAAA-AC-T
i Canis_lupus_VD.CanFam_VD_scaffold_16982               I 3 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11266441 35 -  35597290 TGAA--AA---AT-A-------G---GT------------------GCATATATA---GACAAAGTAAA-AC-T
i Canis_lupus_dingo.QKWQ01001993.1                      I 3 C 0
s Canis_lupus_familiaris.chr31                           11088975 35 +  39895921 TGAA--AA---AT-A-------G---GT------------------GCATATATA---GACAAAGTAAA-AC-T
i Canis_lupus_familiaris.chr31                          I 3 C 0
s Canis_lupus_orion.HG994411.1                           16455990 35 -  44759192 TGAA--AA---AT-A-------G---GT------------------GCATATATA---GACAAAGTAAA-AC-T
i Canis_lupus_orion.HG994411.1                          I 3 C 0
s Capra_aegagrus.CM003214.1                              21325509 28 + 157394656 TAAA--GA---AT-T-------G---AA------------------A-------a---cacaaagtaaa-aa-t
i Capra_aegagrus.CM003214.1                             I 1 C 0
s Capra_hircus.CM004562.1                               135706737 28 - 157403528 TAAA--GA---AT-T-------G---AA------------------A-------a---cacaaagtaaa-aa-t
i Capra_hircus.CM004562.1                               I 1 C 0
s Carlito_syrichta.NW_007248099.1                          309383 28 +    345090 ttaa--aa---gc-t-------g---at------------------g-------a---TACAACAT-AA-AAAT
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               59837 28 +     67245 TCAA--GA---GG-T-------G---AT------------------A-------A---TGCAAAGCAGA-AA-T
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   31429 27 +     33760 TCAA--GT---GT-T-------G---AT------------------A-------A---TATAAACT-AA-TA-T
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   159213 15 -    276539 ------------------------------------------------------G---TGCAAAGTAAA-AA-T
i Catagonus_wagneri.CatWag_scaffold_1305                I 13 C 0
s Cavia_aperea.AVPZ01000278.1                            15786928 27 -  24422027 tcaa--aa---tt-t-------g---at------------------a-------a---taaaaatt-at-ta-t
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15798864 27 -  24440124 tcaa--aa---tt-t-------g---at------------------a-------a---taaaaatt-at-ta-t
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       177055 27 +    436027 TCAA--AA---TT-T-------G---AT------------------A-------A---TAAAAATT-AT-TA-T
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18891184 28 -  29618158 TCAA--GA---GT-T-------G---AT------------------A-------A---TACAATGT-AA-AAAT
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 8728 28 -     26817 TCAA--GA---GT-T-------G---AT------------------A-------A---TACAATGT-AA-AAAT
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                12971 28 +     25043 TCAA--GA---GT-T-------G---AT------------------A-------A---TACAATGT-AA-AAAT
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         8411 28 +     21754 TTAA--AA---GC-T-------G---AT------------------G-------A---TACAACAT-AA-AAAT
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4364193 28 +   7569818 TCAA--GA---GC-T-------G---At------------------a-------a---tacaaagtaaa-aa-t
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         3950 28 -      9338 TCAA--GA---GC-T-------G---AT------------------A-------A---TACAAAGTAAA-AA-T
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6555619 28 +   6739814 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      27096 28 +     60454 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          2302 28 -     21101 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         59611 28 -    107033 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        2501 28 -     17608 TCAA--GA---GC-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          29997 28 +     30494 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          58842 28 -     59240 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          2543 28 +     16677 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           24702 28 +     35983 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11991228 28 +  12117833 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46477988 28 +  46592721 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      41539 27 -     45581 -CAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       2544 28 +     35577 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        2319 28 -     25661 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        2299 28 -     17744 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        21914 28 +     37128 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           3070 26 -      6963 TCCA--G-----T-T-------A---AT------------------A-------A---TACAAAGTAAA-AA-T
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           59372  9 -     68416 TCAA--AA---GT-T-----------------------------------------------------------
i Cheirogaleus_major.k141_1157592                       C 0 I 9
s Cheirogaleus_medius.k141_133808                            8417  9 +     13308 TCAA--AA---GT-T-----------------------------------------------------------
i Cheirogaleus_medius.k141_133808                       C 0 I 9
s Cheracebus_lucifer.k141_619653                             5995 28 -     18223 TCAA--CA---GT-T-------G---AT------------------A-------A---TACAACAT-AT-AAAT
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             23013 28 +     25473 TCAA--CA---GT-T-------G---AT------------------A-------A---TACAACAT-AT-AAAT
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           42053 28 +     57117 TCAA--CA---GT-T-------G---AT------------------A-------A---TACAACAT-AT-AAAT
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          46732 28 +     54541 TCAA--CA---GT-T-------G---AT------------------A-------A---TACAACAT-AT-AAAT
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15962054 27 +  43084221 tcaa--at---tt-t-------g---aa------------------a-------a---tatatatt-ag-ta-t
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         71539 28 +    196370 tcaa--ga---gt-t-------g---at------------------a-------a---tacaacgt-aa-aaat
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          15719 28 +     40510 tcaa--ga---gt-t-------g---at------------------a-------a---tacaacgt-aa-aaat
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15139434 28 -  15256731 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      34515 28 -     53260 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101145075 28 + 101219884 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                16776 28 -     21363 TCCAGAG-----T-T-------A---AT------------------A-------A---TACAAAGTAAA-AA-T
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           762079 28 +    964067 TCCAGAG-----T-T-------A---AT------------------A-------A---TGCAAAgtaaa-aa-t
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10886844 28 +  10971483 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147665009 28 + 156195979 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            16994 28 +     23629 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60613906 28 +  78930452 ACAA--GA---CA-T-------G---Gc------------------a-------a---tacaaagtaaa-aa-t
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252          973 28 -      5782 TCAA--GA---GT-T-------G---TT------------------A-------A---TACAAAATAAA-AA-T
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 278851 22 -    399297 GCAG--TT---CT-T-------G---AC------------------A-------A---T-----GT-AC-TA-T
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53029512 40 +  72327488 ACAA--GG---CT-T-------G---ACAAGCAACGTAAGACAAGCA-------A---T-----GT-AA-TA-T
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            52334 28 -     70449 TCAA--GA---GC-T-------G---AT------------------A-------G---TACAAAGGAAA-AA-T
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  208521 27 -    956709 TCAA--GA---CT-T-------G---AT------------------T-------A---TACCAACT-AA-CA-T
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 30968 27 -     67205 TCAA--AA---TT-T-------G---AT------------------A-------A---CAAAAATT-AG-TA-C
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                18090 27 +     26546 TCAA--AA---TT-T-------G---AT------------------A-------A---TAAAAGGT-AT-TA-T
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             59178 27 -    236241 TCAA--AA---TG-T-------A---AT------------------A-------A---TAAAAATT-AC-TA-T
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          183955 26 -   6883506 TCCA--G-----T-C-------A---AT------------------A-------A---TACAAAGTAAA-AA-T
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16845229  9 +  31942871 TCAA--GA---GT-T-----------------------------------------------------------
i Daubentonia_madagascariensis.ctg11                    C 0 I 9
s Delphinapterus_leucas.KZ290064.1                       80037132 28 -  96802777 TTAA--GG---GT-t-------g---aa------------------a-------a---cacaaagtaaa-aa-a
i Delphinapterus_leucas.KZ290064.1                      I 1 C 0
s Desmodus_rotundus.KZ672188.1                           18699113 28 -  18957592 TCAA--GA---GG-T-------G---AT------------------A-------A---TGCAAAGTAGA-AA-T
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 322842 28 +    993696 TCAA--GA---GC-T-------G---AT------------------A-------A---TACAAAGTAAA-AA-T
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   3497 28 +    151128 TCAA--GA---GC-T-------G---AT------------------A-------A---TACAAAGTAAA-AA-T
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   157318 27 +    228994 TCAA--AA---TT-G-------G---AT------------------A-------T---TATATATT-AG-TA-T
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3656627 27 +   4240102 TCAA--CA---GT-T-------G---AT------------------C-------A---CAGAAAGT-CC-TA-T
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 28270 27 +     28912 TCAA--CA---GT-T-------G---AT------------------C-------A---CAGAAAGT-CC-TA-T
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                36404 27 -     73477 TCAA--AA---TT-T-------G---AT------------------A-------A---TAAAAATT-AT-TA-T
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22998912  9 -  44670279 ---------------------------------------------------------------tcttca-aa-t
i Echinops_telfairi.JH980316.1                          I 5 C 0
s Eidolon_helvum.KE772537.1                                 12570 27 +     24177 TCAC--GA---AT-T-------g---at------------------a-------a---tacaaagtaa--aa-t
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1491784 28 +   1727528 taaa--ga---ac-t-------g---aa------------------a-------a---cacaaagtaaa-aa-t
i Elaphurus_davidianus.JRFZ01086400.1                   I 1 C 0
s Enhydra_lutris.KZ291749.1                              85872498 38 +  99434291 TGAA--AA---AT-A-------G---GG------------------GCATATAGAAGAGACAAAGTAAA-AT-T
i Enhydra_lutris.KZ291749.1                             I 3 C 0
s Eptesicus_fuscus.JH977687.1                             4704476 28 +   6522550 TCAA--GA---GT-T-------G---AT------------------T-------A---TACAAAGTGAA-AT-T
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5853290 28 -   7175178 TCAA--GA---GC-T-------G---at------------------a-------a---tacaaagtaaa-aa-t
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13351795 28 +  41866177 TCAA--GA---GC-T-------G---at------------------a-------a---tacaaagtaaa-aa-t
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          13284 28 +     92910 TCAA--GA---GC-T-------G---at------------------a-------a---tacaaagtaaa-aa-t
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11534569 28 +  16010500 Tcaa--ca---at-t-------a---aa------------------a-------a---tacaaaataaa-aa-c
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48774202 28 -  48907691 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          315350 28 +    330699 TTAA--GG---GT-T-------G---AA------------------A-------A---CACAAAGTAAA-AA-G
i Eschrichtius_robustus.EscRob_flattened_line_685       I 1 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             61801 28 +     89355 TTAA--AG---GT-T-------G---AA------------------A-------A---CACAAAGTAAA-AA-G
i Eubalaena_japonica.EubJap_flattened_line_7756         I 1 C 0
s Eulemur_albifrons.k141_715837                              5428  9 +     13586 TCAA--GA---GT-T-----------------------------------------------------------
i Eulemur_albifrons.k141_715837                         C 0 I 9
s Eulemur_collaris.k141_311830                               5359  9 -      6809 TCAA--GA---GT-T-----------------------------------------------------------
i Eulemur_collaris.k141_311830                          C 0 I 9
s Eulemur_coronatus.k141_3240342                            11836  9 +     36558 TCAA--GA---GT-T-----------------------------------------------------------
i Eulemur_coronatus.k141_3240342                        C 0 I 9
s Eulemur_flavifrons.k141_903901                             8157  9 +     60246 TCAA--GA---GT-T-----------------------------------------------------------
i Eulemur_flavifrons.k141_903901                        C 0 I 9
s Eulemur_fulvus.k141_653297                                11633  9 +    109717 TCAA--GA---GT-T-----------------------------------------------------------
i Eulemur_fulvus.k141_653297                            C 0 I 9
s Eulemur_macaco.k141_1341545                               16019  9 +     16540 TCAA--GA---GT-T-----------------------------------------------------------
i Eulemur_macaco.k141_1341545                           C 0 I 9
s Eulemur_mongoz.k141_825972                                16294  9 +     27497 TCAA--GA---GT-T-----------------------------------------------------------
i Eulemur_mongoz.k141_825972                            C 0 I 9
s Eulemur_rubriventer.k141_411740                           18751  9 +     26808 TCAA--GA---GT-T-----------------------------------------------------------
i Eulemur_rubriventer.k141_411740                       C 0 I 9
s Eulemur_rufus.k141_1620292                                33489  9 +     46535 TCAA--GA---GT-T-----------------------------------------------------------
i Eulemur_rufus.k141_1620292                            C 0 I 9
s Eulemur_sanfordi.k141_186399                              16213  9 -     29447 TCAA--GA---GT-T-----------------------------------------------------------
i Eulemur_sanfordi.k141_186399                          C 0 I 9
s Felis_catus.CM001386.2                                129893253 28 - 159252932 TCAA--GA---GC-T-------g---at------------------a-------a---tacagaagaaa-aa-t
i Felis_catus.CM001386.2                                I 13 C 0
s Felis_catus_fca126.CM031420.1                         129280345 28 - 158578461 TCAA--GA---GC-T-------g---at------------------a-------a---tacagaagaaa-aa-t
i Felis_catus_fca126.CM031420.1                         I 13 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 21485 28 +     52776 TCAA--GA---GC-T-------G---AT------------------A-------A---TACAAAAGAAA-AA-T
i Felis_nigripes.FelNig_flattened_line_8080             I 13 C 0
s Galago_moholi.ctg555                                     211255  9 -    847004 TCAA--GT---AT-T-----------------------------------------------------------
i Galago_moholi.ctg555                                  C 0 I 9
s Galago_senegalensis.k141_964197                           13629  9 -     43889 TCAA--GT---AT-T-----------------------------------------------------------
i Galago_senegalensis.k141_964197                       C 0 I 9
s Galagoides_demidoff.k141_1769638                          10703  9 +     27357 CCAA--GT---GT-T-----------------------------------------------------------
i Galagoides_demidoff.k141_1769638                      C 0 I 9
s Galeopterus_variegatus.GalVar_scaffold_354               156609 27 +    324696 TCAA--GA---TT-T-------G---AT------------------T-------A---TATAAAGT-AA-AA-T
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    181578 28 -    189561 TAAA--GA---AT-T-------G---AA------------------A-------A---CACAAAGTAAA-AA-T
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 1 C 0
s Glis_glis.GliGli_scaffold_79770                           13387 27 -     18683 TCAA--GA---GC-T-------T---AT------------------A-------A---TACAAAAT-AA-TA-A
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               5676 28 -     14630 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119652776 28 - 195582420 tcaa--ga---gt-t-------g---at------------------a-------a---tatgaagt-aa-aaat
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         2205  9 +     10286 TCAA--GA---GT-T-----------------------------------------------------------
i Hapalemur_alaotrensis.k141_1280836                    C 0 I 9
s Hapalemur_gilberti.k141_279011                              682  9 -     11661 TCAA--GA---GT-T-----------------------------------------------------------
i Hapalemur_gilberti.k141_279011                        C 0 I 9
s Hapalemur_griseus.k141_1387522                             6011  9 +     56096 TCAA--GA---GT-T-----------------------------------------------------------
i Hapalemur_griseus.k141_1387522                        C 0 I 9
s Hapalemur_meridionalis.k141_186231                        29262  9 -     42470 TCAA--GA---GT-T-----------------------------------------------------------
i Hapalemur_meridionalis.k141_186231                    C 0 I 9
s Hapalemur_occidentalis.k141_797938                        45885  9 -     54384 TCAA--GA---GT-T-----------------------------------------------------------
i Hapalemur_occidentalis.k141_797938                    C 0 I 9
s Helogale_parvula.HelPar_flattened_line_22962              17540 28 +     53719 TCAA--GA---GC-T-------G---AT------------------A-------A---TACAAAGGAAA-AA-T
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                27793 28 -     91191 TAAA--GA---AT-T-------G---AA------------------A-------A---CACAAAGTAAA-AA-T
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 1 C 0
s Heterocephalus_glaber.JH602058.1                        2551409 27 +  31725842 tcaa--ag---tt-t-------g---AT------------------A-------A---TAAAAATC-AG-TA-T
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               61250  9 +     73687 ---------------------------------------------------------------AGTCAG-AA-T
i Heterohyrax_brucei.HetBruBak_scaffold_25354           I 5 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              147434 28 +    277961 TTAG--GA---GT-T-------G---AA------------------A-------A---CACAAAGTAAA-AA-T
i Hippopotamus_amphibius.HipAmp_scaffold_1308           I 1 C 0
s Hipposideros_armiger.JXIK01001085.1                      278705 28 -    477199 TCAA--GA---GT-T-------G---AT------------------A-------A---TACAAAGTAAA-AA-C
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              7851 28 -      9143 TCAA--GA---GT-T-------G---AT------------------A-------A---TACAAAGTAAA-AA-C
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      5086 28 -   7690867 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 17609 28 -     67322 TCAA--GA---GC-T-------G---AT------------------A-------A---TACAAAGGAAC-AA-T
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19316 22 -    119109 TCAA--AA---TT-T-------G---AT------------------A-------A---TAAAAATT--------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 I 2
s Hylobates_abbotti.k141_164775                               167 28 -      2073 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Hylobates_abbotti.k141_164775                         n 147 C 0
s Hylobates_agilis.k141_1621614                               179 28 -      1673 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Hylobates_agilis.k141_1621614                         C 0 I 9
s Hylobates_pileatus_b.ContigUN                                 14625057 28 -  25970782 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            2313 28 -      2977 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             34216 28 -     60944 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     6478 27 +     22540 TCAA--GA---TT-T-------G---AT------------------A-------A---TAAAAATT-GG-CA-T
i Hystrix_cristata.HysCri_scaffold_50788                C 0 I 1
s Ictidomys_tridecemlineatus.JH393315.1                   7126162 27 +  13083262 TCAA--GA---GC-T-------G---TT------------------A-------A---TACAAAGT-AA-CA-T
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_5141390                                    727  7 -      3181 TCA----A---GT-T-----------------------------------------------------------
i Indri_indri.k141_5141390                              C 0 I 9
s Inia_geoffrensis.IniGeo_flattened_line_66725               9337 28 +     17520 TTAA--GG---GT-T-------G---AA------------------A-------A---CACAAAGTAAA-AA-A
i Inia_geoffrensis.IniGeo_flattened_line_66725          I 1 C 0
s Jaculus_jaculus.JH725517.1                              8566206 27 +  11848649 TCAA--GA---GC-T-------G---GT------------------A-------A---TATAAAGT-GA-TA-C
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               23949 28 +     37189 TTAA--GG---GT-T-------G---GA------------------A-------A---CACAAAGTAAA-CA-G
i Kogia_breviceps.KogBre_flattened_line_35920           I 1 C 0
s Lagothrix_lagothricha.k141_12968                          50570 28 -    147782 TCAA--GA---GC-T-------G---AT------------------A-------A---TACAACAT-AA-AAAT
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                     143 27 +     26176 AAAA--GA---GT-T-------G---AT------------------T-------A---TGCAAAGTAA--AT-G
i Lasiurus_borealis.LasBor_scaffold_59542               n 887 C 0
s Lemur_catta.scaffold_1                                258407566  9 - 285822530 TCAA--GA---GT-T-----------------------------------------------------------
i Lemur_catta.scaffold_1                                C 0 I 9
s Lepilemur_ankaranensis.k141_884009                        24311  9 +     39228 TCAA--AA---GT-T-----------------------------------------------------------
i Lepilemur_ankaranensis.k141_884009                    C 0 I 8
s Lepilemur_dorsalis.k141_134267                            53695  9 +     63517 TCAA--AA---GT-T-----------------------------------------------------------
i Lepilemur_dorsalis.k141_134267                        C 0 I 8
s Lepilemur_ruficaudatus.k141_617879                        78959  9 +    116806 TCAA--GA---GT-T-----------------------------------------------------------
i Lepilemur_ruficaudatus.k141_617879                    C 0 I 8
s Lepilemur_septentrionalis.k141_578524                     31950  9 -     33031 TCAA--AA---GT-T-----------------------------------------------------------
i Lepilemur_septentrionalis.k141_578524                 C 0 I 8
s Leptonychotes_weddellii.KB714749.1                      3086291 38 -   3498232 TGAA--AA---AT-A-------G---GT------------------GCATATAGAAGAGACGAAGTAAA-AT-T
i Leptonychotes_weddellii.KB714749.1                    I 3 C 0
s Lepus_americanus.LepAme_scaffold_62849                    13582 22 +     22452 -----------GT-T-------G---AT------------------A-------A---CACAAAGC-AAAAA-T
i Lepus_americanus.LepAme_scaffold_62849                I 7 C 0
s Lipotes_vexillifer.KE558548.1                            136293 28 +   3060487 TTAA--GG---GT-T-------G---AA------------------A-------A---CACAGAGTAAA-AA-A
i Lipotes_vexillifer.KE558548.1                         I 1 C 0
s Lophocebus_aterrimus.ctg55                             19248713 28 +  19376315 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loxodonta_africana.GL010040.1                          20594627  9 -  62548349 ---------------------------------------------------------------AGTCAA-AA-T
i Loxodonta_africana.GL010040.1                         I 5 C 0
s Loris_lydekkerianus.k141_550999                           11004  9 +     84689 TCAA--GT---GT-T-----------------------------------------------------------
i Loris_lydekkerianus.k141_550999                       C 0 I 9
s Loris_tardigradus.ctg97                                 3778753  9 +   6799190 TCAA--GT---GT-T-----------------------------------------------------------
i Loris_tardigradus.ctg97                               C 0 I 9
s Lycaon_pictus.CM007556.1                               11088431 35 +  39895028 TGAA--AA---AT-A-------G---GT------------------GCATATATA---GACAAAGTAAA-AC-T
i Lycaon_pictus.CM007556.1                              I 3 C 0
s Macaca_arctoides.k141_2201161                             20448 28 +     74745 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12706905 28 +  12821369 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                2547 28 -      3136 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           47365 28 +     63263 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                 2070 28 -      2568 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 2655 28 -      7381 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  45872 28 -     79256 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196035979 28 + 196197964 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11446149 28 +  11645122 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   4819 28 -     46448 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                2493 28 -     13212 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 16172 28 -     55006 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43841288 28 +  43892939 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               17458 28 -     24607 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               4824 28 -     27140 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43437873 28 -  43563597 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4450693 28 -   4543643 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            146377 26 +    252755 TCAA--G-----T-T-------G---GT------------------A-------A---TACAAAGTAAA-AA-T
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             36520 26 +     58827 TCAA--G-----T-T-------G---GT------------------A-------A---TACAAAGTAAA-AA-T
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36873986 27 +  64221397 TCAA--GA---GC-T-------G---TT------------------A-------A---TACAAAGT-AA-CA-T
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       64748 28 -    234502 TCAA--GA---GT-T-------G---AT------------------A-------A---TACAAAGGGAA-AA-T
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             1310 38 -     87323 TGAA--AA---AT-A-------G---GG------------------GCATATAGAAGAGACAAAGTAAA-AT-T
i Mellivora_capensis.MelCap_flattened_line_15433        I 3 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               13009 22 +     15977 GCAA--GA---CT-T-------G---AC------------------A-------A---T-----AT-AA-TA-T
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1047203 40 -  26018355 ACAA--GA---CT-T-------G---TCAAGCAACGTAAGACAAGCA-------A---T-----GT-AA-TA-T
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_227248                    625 28 -      1377 TTAA--GG---GT-T-------G---AA------------------A-------A---CACAAAGTAAA-AA-G
i Mesoplodon_bidens.MesBid_scaffold_227248              I 1 C 0
s Microcebus_murinus.CM007691.1                          16510593  9 +  47401472 ---------------------------------------------------------------AAT-AA-AATC
i Microcebus_murinus.CM007691.1                         I 9 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  34914  5 -     48017 TCAA--A-------------------------------------------------------------------
i Microgale_talazaci.MicTal_scaffold_34660              C 0 I 9
s Micronycteris_hirsuta.MicHir_scaffold_37978               23022 28 -     32043 TCAA--GA---GG-T-------G---AT------------------A-------A---TGCAAAGTAGA-AA-T
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8209994 28 +  10048721 TCAA--GA---GT-T-------G---at------------------a-------a---tacaaagtaaa-aa-t
i Miniopterus_natalensis.LDJU01000022.1                 C 0 I 224
s Miniopterus_schreibersii.MinSch_scaffold_24116            34648 28 +     45743 TCAA--GA---GT-T-------G---AT------------------A-------A---TACAAAGTAAA-AA-T
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 I 223
s Miopithecus_ogouensis.k141_2935907                         2422 28 +     29742 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        11807 38 -    104932 TGAA--AA---AT-A-------G---GT------------------GCATATAGAAGAGACGAAGTAAA-AT-T
i Mirounga_angustirostris.MirAng_flattened_line_8852    I 3 C 0
s Mirza_zaza.k141_226143                                     5972  9 +      8497 TCAA--AA---GT-T-----------------------------------------------------------
i Mirza_zaza.k141_226143                                I 3 I 9
s Monodon_monoceros.MonMon_M_scaffold_5598                 146722 28 +    154973 TTAA--GG---GT-T-------G---AA------------------A-------A---CACAAAGTAAA-AA-A
i Monodon_monoceros.MonMon_M_scaffold_5598              I 1 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                161540 28 +    265003 TTAA--GA---GT-T-------G---AT------------------A-------A---CACAAAGTAAA-AC-T
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  1808 28 -     19904 TAAA--GA---AT-T-------G---AA------------------A-------A---CACAAAGTAAA-AA-T
i Moschus_moschiferus.MosMos_scaffold_78805             I 1 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  145235 28 -    168139 TCAA--GA---GC-T-------G---AT------------------A-------A---TACAAAGGAAA-AA-T
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          19846 28 -    100666 TCAA--AA---GT-T-------G---AT------------------T-------A---TACAGAGTAAA-AT-T
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70766844 29 +  92629107 TCAA--GA---CA-TGGACAATG---AA------------------A-------A---T-----GG-AA-TA-T
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75489904 29 +  98207768 tcaa--GC---CA-TGGACAATG---AC------------------A-------A---T-----GG-AA-TA-T
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67556142 29 +  89017189 TCAA--GA---CA-TGGACAATG---AC------------------A-------A---T-----GG-AA-TA-T
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74331079 29 +  97876770 TCAA--GC---CA-TGGACAATG---AC------------------A-------A---T-----GG-AA-TA-T
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             12143 27 +     98495 TCAC--GA---GT-T-------G---AC------------------A-------A---TTCAAAGT-AA-TA-A
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4424679 38 -  28371801 TGAA--AA---AT-A-------G---AG------------------GCATATAGAAGAGACAAAGTAAA-AT-T
i Mustela_putorius.JH417978.1                           I 3 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     90260 26 -    117718 TCAA---A---TT-T-------G---AT------------------A-------A---CAAAAATT-TG-CA-T
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               968157 28 +   8389877 TCAA--GA---GT-T-------G---AT------------------T-------A---TACAAAGTAAA-AT-T
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5019830 28 +   6462685 TCAA--GA---GT-T-------G---AT------------------T-------A---TACAAAGTAAA-AT-T
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3465739 28 -   3747815 TCAA--GA---GT-T-------G---AT------------------T-------A---TACAAAGTAAA-AT-T
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        10949 28 +     66751 TCAA--GA---GT-T-------G---AT------------------T-------A---TACAAAGTAAA-AT-T
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             5345 26 -      8794 TCCA--G-----T-C-------A---GT------------------A-------A---TACAAAGTGAA-AA-T
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            118993 27 +    362372 TTAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-TA-T
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               8929 28 +     48152 TCAA--CA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4485197 38 -  14209539 TGAA--AA---AT-A-------G---GT------------------GCATATAGAAGAGACGAAGTAAA-AT-T
i Neomonachus_schauinslandi.NINY01007774.1              I 3 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3951334 28 -   4490290 TTAA--GG---GT-T-------g---aa------------------a-------a---cacaaagtaaa-aa-a
i Neophocaena_asiaeorientalis.KZ688543.1                I 1 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  50022 28 +     94413 TCAA--GT---GT-T-------G---AT------------------A-------A---TATGAAGTAAA-AA-T
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_720788                             311 28 -      1065 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Nomascus_annamensis.k141_720788                       C 0 C 0
s Nomascus_concolor.k141_226614                              1615 28 -      5092 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_39679                              586 28 -     17937 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Nomascus_gabriellae.k141_39679                        I 39 C 0
s Nomascus_siki_b.tarseq_80                             25333 28 -  18771707 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  3036 28 +      4512 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                31231 35 +   3668941 TGAA--AA---AT-A-------G---GT------------------GCATATAGA---GACAAAGTAAA-AC-T
i Nyctereutes_procyonoides.CAJHUB010000786.1            I 3 C 0
s Nycticebus_bengalensis.LG16                            65567448  9 -  95554990 TCAA--GT---GT-T-----------------------------------------------------------
i Nycticebus_bengalensis.LG16                           C 0 I 9
s Nycticebus_coucang.k141_2051882                            4174  9 +      6470 TCAA--GT---GT-T-----------------------------------------------------------
i Nycticebus_coucang.k141_2051882                       C 0 I 9
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65669783  9 +  89412551 TCAA--GT---GT-T-----------------------------------------------------------
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 I 9
s Ochotona_princeps.JH802095.1                            4996325 28 -  23139505 TCAA--GA---GT-T-------G---At------------------a-------a---cacaaagc-aaaaa-t
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3685799 27 +  10294119 TCAA--AA---TT-T-------G---AT------------------A-------A---CAAAATTT-AG-TA-T
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             679864 38 -   3126709 TGAA--AA---AT-A-------G---GT------------------GCATATAGAAGAGACAAAGTAAA-AT-T
i Odobenus_rosmarus.KB229369.1                          I 3 C 0
s Odocoileus_virginianus.KZ101650.1                       1080014 28 +   1425656 TAAA--GA---AT-T-------G---AA------------------A-------A---CACAAAGTAAA-AA-T
i Odocoileus_virginianus.KZ101650.1                     I 1 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         37306 28 +     78940 TAAA--GA---AT-T-------G---AA------------------A-------A---CACAAAGTAAA-AA-T
i Okapia_johnstoni.LVCL01S0017931.1                     I 1 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  37404 26 +     62360 ACAA--GA---CT-T-------G---ACAA--A-C-----------A-------A---A-----GC-AA-TA-T
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7225019 28 -   7562323 TTAA--GG---GT-T-------g---aa------------------a-------a---cacaaagtaaa-aa-a
i Orcinus_orca.KB316965.1                               I 1 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              57921  9 -     66828 ---------------------------------------------------------------AGTCAA-AA-T
i Orycteropus_afer.OryAfe_flattened_line_13509          I 5 C 0
s Oryctolagus_cuniculus.CM000803.1                      141876616 22 + 163896628 -----------GT-T-------G---AT------------------A-------A---CACAAAGC-AGAAA-T
i Oryctolagus_cuniculus.CM000803.1                      I 4 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      308515 35 -    505867 TGAA--AA---AT-A-------G---GT------------------GCATATAGA---GACAAAGTAAA-AC-T
i Otocyon_megalotis.JAEUCK010005121.1                   I 3 C 0
s Otolemur_crassicaudatus.k141_505435                        1073  9 -     53940 TCAA--GT---GT-T-----------------------------------------------------------
i Otolemur_crassicaudatus.k141_505435                   C 0 I 9
s Otolemur_garnettii.GL873528.1                          18009053  9 -  38779656 TCAA--GT---GT-T-----------------------------------------------------------
i Otolemur_garnettii.GL873528.1                         C 0 I 9
s Ovis_aries.CM001582.2                                 134077584 28 - 275406953 TAAA--GA---AT-T-------G---AA------------------A-------A---CACAAAGTAAA-AA-T
i Ovis_aries.CM001582.2                                 I 1 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      78799 28 +    140051 TAAA--GA---AT-T-------G---AA------------------A-------A---CACAAAGTAAA-AA-T
i Ovis_canadensis.OviCan_scaffold_6251                  I 1 C 0
s Pan_paniscus.CM003386.1                               127575042 28 - 205426864 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120152196 28 - 196562556 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  34650 28 +    295523 TCAA--GA---GC-T-------G---AT------------------A-------A---TACAAAGGAAA-AA-T
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3638384 28 +  18214204 TCAA--GA---GC-T-------g---at------------------a-------a---tacaaaggaaa-aa-t
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5028059 28 -   6340057 TCAA--GA---GC-T-------g---at------------------a-------a---tacaaaggaaa-aa-t
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1066434 28 -   1292953 TAAA--GA---AT-T-------G---AA------------------A-------G---CACAAAGTAAA-AA-T
i Pantholops_hodgsonii.KE114631.1                       I 1 C 0
s Papio_anubis.CM001492.2                               188156660 28 - 188283584 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             4977 28 +      5367 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47514045 28 +  47705337 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 68021 28 -    104429 TCAG--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    6557 28 +     14967 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 2416 28 -      7628 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    116112 28 -    135482 ACAA--GA---GC-T-------G---AT------------------A-------A---TACAAAGGAAA-AA-T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           5762  9 -     23713 TCGA--GT---GT-T-----------------------------------------------------------
i Perodicticus_ibeanus.k141_117958                      C 0 I 9
s Perodicticus_potto.k141_713187                            25075  9 -     27972 TCGA--GT---GT-T-----------------------------------------------------------
i Perodicticus_potto.k141_713187                        C 0 I 9
s Perognathus_longimembris.PerPac_flattened_line_22291      44908 27 -     45160 TCAA--GA---GT-T-------G---AT------------------A-------A---TAGAAAGT-CA-CA-T
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4950652 26 -   8017169 GCAA--GA---CT-T-------G---AT--G-AAC-----------A-------A---T-----GC-AA-TA-T
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    13224 28 -     36578 ttaa--aa---tttt-------g---at------------------a-------a---taaaaatt-AG-CA-T
i Petromus_typicus.PetTyp_scaffold_33007                I 465 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            121624 28 -    122454 TTAA--GG---GT-T-------G---AA------------------A-------A---CACAAAGTAAA-AA-A
i Phocoena_phocoena.PhoPho_flattened_line_11948         I 1 C 0
s Piliocolobus_badius.k141_1987485                           2443 28 -      5908 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       3067 28 -     17985 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            2434 28 +      7694 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26740912 28 +  26888534 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            97774 28 +    112873 TCAA--GA---GT-T-------G---AT------------------T-------A---TACAAAGTAAA-AT-T
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             44176 28 -     61926 tcaa--ga---gt-t-------g---at------------------a-------a---tacaacgt-aa-aaat
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        25561 28 +     78826 TCAA--CA---GT-T-------G---AT------------------A-------A---TACAACGT-AA-AAAT
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              9608 28 -     15800 TCAA--GA---GT-T-------G---AT------------------A-------A---TACAACGT-AA-AAAT
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        12807 28 -     16101 TCAA--GA---GT-T-------G---AT------------------A-------A---TACAACGT-AA-AAAT
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          6035 28 +      9673 TCAA--GA---GT-T-------G---AT------------------A-------A---TACAACGT-AA-AAAT
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13475035 28 -  19735023 tcaa--ga---gt-t-------g---at------------------a-------a---tacaacgt-aa-aaat
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           13938 28 -     31692 TCAA--GA---GT-T-------G---AT------------------A-------A---TACAACGT-AA-AAAT
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           5710 28 +     21690 TTAA--GG---GT-T-------G---AA------------------A-------A---CACAAAGTAAA-AA-G
i Platanista_gangetica.PlaMin_flattened_line_72990      I 1 C 0
s Plecturocebus_bernhardi.k141_959214                       23278 28 +     44506 TCAA--CA---GT-T-------G---AT------------------A-------A---TACAACAT-AT-AAAT
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        23490 28 +     67491 TCAA--CA---GT-T-------G---AT------------------A-------A---TACAACAT-AT-AAAT
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      13730 28 -     98129 TCAA--CA---GT-T-------G---AT------------------A-------A---TACAACAT-AT-AAAT
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     23330 28 +    147771 TCAA--CA---GT-T-------G---AT------------------A-------A---TACAACAT-AT-AAAT
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        23587 28 -     23762 TCAA--CA---GT-T-------G---AT------------------A-------A---TACAACAT-AT-AAAT
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          4049 28 -     55515 TCAA--CA---GT-T-------G---AT------------------A-------A---TACAACAT-AT-AAAT
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         23403 28 +    152463 TCAA--CA---GT-T-------G---AT------------------A-------A---TACAACAT-AT-AAAT
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       1120 28 -    119457 TCAA--CA---GT-T-------G---AT------------------A-------A---TACAACAT-AT-AAAT
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         13126 28 +    134592 TCAA--CA---GT-T-------G---AT------------------A-------A---TACAACAT-AT-AAAT
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          23713 28 -     75465 TCAA--CA---GT-T-------G---AT------------------A-------A---TACAACAT-AT-AAAT
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              187562 28 -    373494 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19808210 28 +  19899266 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               6173 28 -     15069 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              6303 28 +     14865 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                2360  9 -      9567 ---------------------------------------------------------------AGTCAG-AA-T
i Procavia_capensis.ProCapCap_scaffold_149274           I 5 C 0
s Prolemur_simus.MPIZ01000048.1                           6848943  9 +  12164890 TCAA--GA---GT-T-----------------------------------------------------------
i Prolemur_simus.MPIZ01000048.1                         C 0 I 9
s Propithecus_coquerelli.NW_012147863.1                     17252  7 -     30946 TCA----A---GT-T-----------------------------------------------------------
i Propithecus_coquerelli.NW_012147863.1                 C 0 I 9
s Propithecus_coronatus.k141_1353159                         4009  7 +     11805 TCA----A---GT-T-----------------------------------------------------------
i Propithecus_coronatus.k141_1353159                    C 0 I 9
s Propithecus_diadema.k141_577245                           43352  7 +     52369 TCA----A---GT-T-----------------------------------------------------------
i Propithecus_diadema.k141_577245                       C 0 I 9
s Propithecus_edwardsi.k141_1317105                         35739  7 -     44753 TCA----A---GT-T-----------------------------------------------------------
i Propithecus_edwardsi.k141_1317105                     C 0 I 9
s Propithecus_perrieri.k141_7554                            17663  7 +     27322 TCA----A---GT-T-----------------------------------------------------------
i Propithecus_perrieri.k141_7554                        C 0 I 9
s Propithecus_tattersalli.k141_907138                       17299  7 -     53241 TCA----A---GT-T-----------------------------------------------------------
i Propithecus_tattersalli.k141_907138                   C 0 I 9
s Propithecus_verreauxi.k141_158021                         39563  7 -     48185 TCA----A---GT-T-----------------------------------------------------------
i Propithecus_verreauxi.k141_158021                     C 0 I 9
s Psammomys_obesus.NESX01026517.1                           34558 22 +     77221 GCAA--GG---CT-G-------G---AC------------------A-------A---T-----AT-AA-TA-T
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            4185 28 -     27784 TTAA--GA---GT-T-------g---at------------------a-------a---tacaaagtaaa-aa-t
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        246989 38 -    344369 TGAA--AA---AT-A-------G---GG------------------GCATATAGAAGAGACAAAGTAAA-AT-T
i Pteronura_brasiliensis.PteBra_flattened_line_1343     I 3 C 0
s Pteropus_alecto.KB031157.1                             13246302 28 -  17261082 TCAA--GA---AT-T-------g---at------------------a-------a---tacaaagtaaa-aa-t
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             604253 28 -   3946241 tcaa--ga---at-t-------t---at------------------a-------a---TACAAAGTAAA-AG-T
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131534637 28 - 161321710 TCAA--GA---GC-T-------g---at------------------a-------a---tacaaaggaaa-aa-t
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             30294 28 +     56732 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6806782 28 +   6970761 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             6173 28 +     18040 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                16111 28 +     68503 TAAA--GA---AT-T-------G---AA------------------A-------A---CACAAAGTAAA-AA-T
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 1 C 0
s Rattus_norvegicus.chr11                                13915851  9 +  90463843 CCAA--GA---CA-T-----------------------------------------------------------
i Rattus_norvegicus.chr11                               C 0 I 1475
s Rhinolophus_sinicus.LVEH01000179.1                      1788129 28 +   2252614 TCAG--GG---GC-T-------G---AT------------------A-------A---TACAAAGTAAA-AA-C
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                             585 28 -     17045 TCAA--GA---GT-T-------G---AT------------------A-------A---CATTAAGT-AA-AAAT
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206378062 28 - 206558726 TCAA--GA---GT-T-------G---AT------------------A-------A---CATGAAGT-AA-AAAT
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44856976 28 -  45163003 TCAA--GA---GT-T-------G---AT------------------A-------A---CATTAAGT-AA-AAAT
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                19636 28 +    109198 TCAA--CA---AT-T-------G---GT------------------A-------A---AACAAAGTAAA-AA-T
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       8260 28 +     12214 TAAA--GA---AT-T-------G---AA------------------A-------A---CACAAAGTAAA-AA-T
i Saiga_tatarica.SaiTat_scaffold_82192                  I 1 C 0
s Saimiri_boliviensis.NW_024100938.1                     15673140 28 -  43202129 TCAA--GA---GT-C-------G---AT------------------A-------A---TACAACTT-AA-AAAT
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        5053 28 +     34089 TCAA--GA---GT-C-------G---AT------------------A-------A---TACAATGT-AA-AAAT
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              4995 28 -     60842 TCAA--GA---GT-C-------G---AT------------------A-------A---TACAACGT-AA-AAAT
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              5088 28 +     67014 TCAA--GA---GT-C-------G---AT------------------A-------A---TACAACGT-AA-AAAT
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              5066 28 +     60816 TCAA--GA---GT-C-------G---AT------------------A-------A---TACAACGT-AA-AAAT
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 5003 28 -     76454 TCAA--GA---GT-C-------G---AT------------------A-------A---TACAACGT-AA-AAAT
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17341728 28 -  30362882 TCAA--GA---GT-T-------G---AT------------------A-------A---TACAATGT-AA-AAAT
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         21089 28 -     62485 TCAA--GA---GT-T-------G---AT------------------A-------A---TACAATGT-AA-AAAT
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   32601 20 -    114521 --------------T-------G---GT------------------A-------A---TACAAAGGAAA-AA-T
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        3786 28 +     15331 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       9179 28 +     20762 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         119182 28 +    130994 TCAA--AA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           37968 28 +     46263 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     31088 28 +     42640 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        14128 28 +     30600 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  100599 22 -    120886 GCAA--GA---CT-T-------G---AC------------------A-------A---T-----GT-AA-TA-T
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            19192 28 +    739146 TCAA--GA---AT-T-------T---AT------------------G-------A---AACAAAGTTAA-AA-T
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17766377 12 -  27805282 TCAG--GA---GT-T-------G---AT----------------------------------------------
i Sorex_araneus.JH798170.1                              C 0 I 14
s Spermophilus_dauricus.KZ294190.1                        2240078 27 +   2842873 TCAA--GA---GC-T-------G---TT------------------A-------A---TACAAGGT-AA-CA-T
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             235108 38 -    276980 TGAA--AA---AT-A-------G---GG------------------GCATATAGAAGAGACAAAATAAA-AT-T
i Spilogale_gracilis.SpiGra_flattened_line_905          I 3 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            27895 28 +     62062 TCAA--GA---GC-T-------G---AT------------------A-------A---TACAAAGGAAA-AA-T
i Suricata_suricatta.SurSur_flattened_line_20339        I 3 C 0
s Sus_scrofa.CM000824.4                                 189272186 15 + 218635234 ------------------------------------------------------A---TGCAAAGTGAA-AG-T
i Sus_scrofa.CM000824.4                                 I 13 C 0
s Symphalangus_syndactylus.tarseq_24                        15318 28 -  13920577 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                 564 28 +     20549 TCAA--GA---GT-T-------G---AT------------------A-------A---CACAAAGTAAA-AA-C
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               15010 26 +     45698 TCCA--G-----T-C-------A---GT------------------A-------A---TACAAAGTAAA-AA-T
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      807431 28 +   1148477 TCAA--GA---GC-T-------G---AT------------------A-------A---TACAATGTAAA-AA-T
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  58142 28 +     99546 TCAA--GA---GC-T-------G---AT------------------A-------A---TACAAAGTAAA-AA-T
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               26857 28 +     42269 TTAA--AA---GC-T-------G---AT------------------G-------A---TACAAAAT-AA-AAAT
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               60173 28 +     65473 TTAA--AA---GC-T-------G---AT------------------G-------A---TACAAAAT-AA-AAAT
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194008182 28 - 194193292 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             39037 15 -     47444 ----------------------------------------------G-------A---CAAGAATT-AG-TA-T
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         I 9 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  5829 26 +      6782 TCCA--G-----T-C-------A---AT------------------A-------A---TACAAAGTAAA-AA-T
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  136182 28 -    259118 TCAA--GA---GG-T-------A---AT------------------A-------A---TGCAAAGTAGA-AA-T
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        27284 28 +     38948 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   21016 28 -     32910 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      2402 28 -     12939 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       2338 28 -     14244 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           43737 28 -     54611 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        1540 28 -     11566 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     3717 28 -     15592 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          2373 28 +     14371 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                    654 28 +     12481 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                         530 28 -     24393 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       5776 28 -     28054 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44660576 28 -  44834318 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       2884 28 +     13828 TCAA--GA---GT-T-------G---AT------------------A-------A---TATGAAGT-AA-AAAT
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   5486 28 +     90398 CAAA--GA---AC-T-------G---AA------------------A-------A---CACAAAGTAAA-AA-T
i Tragulus_javanicus.TraJav_scaffold_14717              I 1 C 0
s Trichechus_manatus.JH594618.1                          16085302  9 +  31416278 ---------------------------------------------------------------AGTCAA-AA-T
i Trichechus_manatus.JH594618.1                         I 5 C 0
s Tupaia_chinensis.KB320831.1                             2793225 28 -   3938065 TCAA--GG---GT-G-------G---TT------------------A-------A---CACAAAGT-AAAAA-T
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    5425 28 +     13056 TCAA--GG---GT-G-------G---TT------------------A-------A---CACAAAGT-AAAAA-T
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69313735 28 -  96451834 TTAA--GG---GT-T-------g---aa------------------a-------a---cacaaagtaaa-aa-a
i Tursiops_truncatus.MRVK01000923.1                     I 1 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   1639 27 +     10241 TCAA--GA---AA-G-------G---GT------------------A-------A---TGCAAAGGGAA-AG--
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6515118 38 +  28682327 TGAA--AA---AT-A-------G---GT------------------GTATATAGAAGAGACAAAGTAAA-AT-T
i Ursus_maritimus.KK498671.1                            I 3 C 0
s Varecia_rubra.k141_432109                                  5640  9 -     20643 TCAA--GA---GT-T-----------------------------------------------------------
i Varecia_rubra.k141_432109                             C 0 I 9
s Varecia_variegata.k141_775891                             25181  9 -     33872 TCAA--GA---GT-T-----------------------------------------------------------
i Varecia_variegata.k141_775891                         C 0 I 9
s Vicugna_pacos.KN269600.1                                1524983 28 -   2331223 TCAA--GA---Gt-t-------g---aa------------------a-------a---tgcaaagtaaa-aa-t
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                138612 34 -    281493 TGAA--AA---CT-A-------G---GT------------------GCATATAGA---GACAAAATAAA--C-T
i Vulpes_lagopus.VulLag_flattened_line_2045             I 3 C 0
s Xerus_inauris.XerIna_scaffold_7898                       127193 27 -    134049 TCAA--GC---AC-T-------G---GT------------------A-------A---TACAAAGT-AA-TA-G
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        214591 38 -    227762 TGAA--AA---AA-A-------G---GT------------------GCATATAGAAGAGACAAAGTAAA-AT-T
i Zalophus_californianus.ZalCal_flattened_line_4097     I 3 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     15521 27 -     20485 TACA--GA---GC-T-------G---AT------------------A-------A---TACTAAGT-GA-TA-T
i Zapus_hudsonius.ZapHud_scaffold_64392                 I 3 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           7234 28 -      8775 TTAA--GG---GT-T-------G---AA------------------A-------A---CACAAAGTAAA-AA-G
i Ziphius_cavirostris.ZipCav_flattened_line_127025      I 1 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                701732 90 +    802869 I
e Elephantulus_edwardii.JH947210.1                        7816099 793 +  15467074 I
e Crocidura_indochinensis.CroInd_scaffold_848148              199  0 +      1327 C
e Hylobates_klossii.k141_285563                               343 193 +      1026 I
e Microtus_ochrogaster.CM001673.1                        22820341  4 -  98408828 I
e Ondatra_zibethicus.OndZib_scaffold_6821                  125594  4 +    145789 I
e Graphiurus_murinus.GraMur_scaffold_4493                   77863  0 +    118900 C
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I
e Ellobius_talpinus.LOJH01090055.1                           7151  4 -      7838 I
e Ellobius_lutescens.LOEQ01003611.1                        240029  1 -    369425 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               12191  6 +    209709 T-T---AG-------TA
s Acinonyx_jubatus.LLWD01000356.1                         2034326 10 +   3721120 t-t---aG-TGCAT-A-
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    112900  6 -    189883 T-T---AA-------TG
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10657663 10 +  23371972 T-C---AG-tgcat-a-
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7095011 10 -  16596857 T-T---CG-TGCAT-G-
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   17221  6 -     22067 T-T---AG-------TG
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   1701  6 -     60446 T-T---AA-------TA
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         2421  6 -     29318 T-T---AA-------TA
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         1356  6 +     38766 T-T---AA-------TA
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          2315  6 -     80423 T-T---AA-------TA
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            10618  6 -     18050 T-A---GA-------TG
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_1710068                                333  6 +      1555 T-A---GG-------TG
i Alouatta_caraya.k141_1710068                          C 0 C 0
s Alouatta_discolor.k141_811576                             11291  6 -     21359 T-A---GA-------TG
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                 912  6 +      2129 T-A---GG-------TG
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_2177643                           296  6 -      1868 T-A---GG-------TG
i Alouatta_macconnelli.k141_2177643                     C 0 C 0
s Alouatta_nigerrima.k141_3537692                             345  6 +      1660 T-A---GG-------TG
i Alouatta_nigerrima.k141_3537692                       C 0 C 0
s Alouatta_palliata.k141_2764452                              260  6 -      1435 T-A---GG-------TG
i Alouatta_palliata.k141_2764452                        n 6 I 644
s Alouatta_puruensis.k141_1284840                            4338  6 -      4927 T-A---GG-------TG
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_1531728                             475  6 -      1692 T-A---GA-------TG
i Alouatta_seniculus.k141_1531728                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3520461 11 +   4113121 T-T---AACTATAT-A-
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      390669 11 -    631301 T-C---AG-TAGAA-Ac
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 I 145
s Antilocapra_americana.AntAmePen_scaffold_42841            31042 11 +     33004 T-T---AACTATAT-A-
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 62970  6 +     78111 T-A---GG-------TG
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            5912  6 +     22701 T-A---GG-------TG
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5749869  6 +   9889416 T-A---GG-------TG
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             6458  6 -    104377 T-A---GG-------TG
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               6460  6 +     23246 T-A---GG-------TG
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     4014  6 +      5067 T-A---AG-------TG
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        1379  6 +      9265 T-C---AG-------TA
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 9075 11 -     29036 T-C---AA-TAGAa-ac
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 I 155
s Ateles_geoffroyi_b.tarseq_2582                             9539729  6 +  39197703 T-A---GG-------TG
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             61000  6 +     85812 T-A---GG-------TG
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                12013  6 +     89302 T-A---GG-------TG
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             16516  6 -     58268 T-A---GG-------TG
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             64508  6 +    119057 T-A---GG-------TG
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               6479  6 -     25888 T-A---GG-------TG
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 7110  6 -     16375 T-T---AG-------TG
i Avahi_laniger.k141_2840928                            I 9 C 0
s Avahi_peyrierasi.k141_798820                                729  6 +      6337 T-C---AG-------TG
i Avahi_peyrierasi.k141_798820                          I 9 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26380536 10 +  51448160 t-T---AG-TGcat-a-
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        5708 10 -     13118 t-T---AG-TGcat-a-
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   43531 11 -     72089 T-T---AACTATAT-A-
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6560194 11 +   6870073 T-T---CACTATAT-A-
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138140303 11 - 161108492 T-T---CACTATAT-A-
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     572844 11 -    998990 T-T---CACTATAT-A-
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136296036 11 - 158972876 T-T---CACTATAT-A-
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1233115 11 -   1914593 T-T---CACTATAT-A-
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               114366  6 -    171031 t-a---ag-------tg
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 13395  6 +    125063 t-a---ag-------tg
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                15438  6 -    216513 t-a---ag-------tg
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        7981  6 -    134917 t-a---ag-------tg
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3219906 10 -   8989139 t-t---ag-tgtat-a-
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           397607 10 -  15254737 t-t---ag-tgtat-a-
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2973343 10 +   6889770 t-t---ag-TGTAT-A-
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11519809 10 +  39901454 T-T---AG-TGCAT-G-
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   14834 10 +     87036 T-T---AG-TGCAT-G-
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11266476 10 -  35597290 T-T---AG-TGCAT-G-
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11089010 10 +  39895921 T-T---AG-TGCAT-G-
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16456025 10 -  44759192 T-T---AG-TGCAT-G-
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21325537 11 + 157394656 t-t---aaCTATAT-A-
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135706765 11 - 157403528 t-t---aaCTATAT-A-
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          309411  5 +    345090 T-T---AG-------T-
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               59865 11 +     67245 T-C---AA-TAGAa-ac
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 I 154
s Castor_canadensis.CasCan_scaffold_47037                   31456  6 +     33760 T-T---AG-------TA
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   159228 12 -    276539 T-TAT-AG-TGTGC-A-
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 I 1
s Cavia_aperea.AVPZ01000278.1                            15786955  6 -  24422027 c-t---aC-------TC
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15798891  6 -  24440124 c-t---aC-------TC
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       177082  6 +    436027 C-T---AC-------TC
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18891212  6 -  29618158 T-A---GG-------TG
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 8756  6 -     26817 T-A---GG-------TG
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                12999  6 +     25043 T-A---GG-------TG
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         8439  5 +     21754 T-T---AG-------T-
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4364221 10 +   7569818 t-t---ag-tgcat-a-
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         3978 10 -      9338 T-T---AG-TGCAT-A-
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6555647  6 +   6739814 T-T---AA-------TA
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      27124  6 +     60454 T-T---AA-------TA
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          2330  6 -     21101 T-T---AA-------TA
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         59639  6 -    107033 T-T---AA-------TA
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        2529  6 -     17608 T-T---AA-------TA
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          30025  6 +     30494 T-T---AA-------TA
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          58870  6 -     59240 T-T---AA-------TA
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          2571  6 +     16677 T-T---AA-------TA
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           24730  6 +     35983 T-T---AA-------TA
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11991256  6 +  12117833 T-T---AA-------TA
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46478016  6 +  46592721 T-T---AA-------TA
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      41566  6 -     45581 T-T---AA-------TA
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       2572  6 +     35577 T-T---AA-------TA
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        2347  6 -     25661 T-T---AA-------TA
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        2327  6 -     17744 T-T---AA-------TA
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        21942  6 +     37128 T-T---AA-------TA
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           3096  6 -      6963 T-T---AA-------CG
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           59390  6 -     68416 T-C---AG-------TG
i Cheirogaleus_major.k141_1157592                       I 9 C 0
s Cheirogaleus_medius.k141_133808                            8435  6 +     13308 T-C---AG-------TG
i Cheirogaleus_medius.k141_133808                       I 9 C 0
s Cheracebus_lucifer.k141_619653                             6023  6 -     18223 T-A---GG-------TG
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             23041  6 +     25473 T-A---GG-------TG
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           42081  6 +     57117 T-A---GG-------TG
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          46760  6 +     54541 T-A---GG-------TG
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15962081  6 +  43084221 C-T---AC-------TG
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         71567  6 +    196370 t-a---ag-------tg
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          15747  6 +     40510 t-a---ag-------tg
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15139462  6 -  15256731 T-T---AA-------TA
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      34543  6 -     53260 T-T---AA-------TA
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101145103  6 + 101219884 T-T---AA-------TA
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                16804  6 -     21363 G-T---GG-------TA
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           762107  6 +    964067 g-t---gg-------ta
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10886872  6 +  10971483 T-T---AA-------CA
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147665037  6 + 156195979 T-T---AA-------CA
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            17022  6 +     23629 T-T---AA-------CA
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60613934  4 +  78930452 t-t---ag---------
i Condylura_cristata.JH655880.1                         C 0 I 1
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         1001  4 -      5782 T-T---AG---------
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 I 2
s Cricetomys_gambianus.CriGam_scaffold_949                 278873  7 -    399297 TCT---AT-------TG
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53029552  6 +  72327488 T-T---GA-------TG
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            52362 10 -     70449 T-T---AG-TGCAT-G-
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  208548  6 -    956709 T-T---AG-------TA
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 30995  6 -     67205 C-T---AC-------TG
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                18117  6 +     26546 C-T---AC-------TG
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             59205  6 -    236241 C-T---GC-------TG
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          183981  6 -   6883506 T-T---AA-------tg
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16845247  6 +  31942871 T-C---AG-------TG
i Daubentonia_madagascariensis.ctg11                    I 9 C 0
s Delphinapterus_leucas.KZ290064.1                       80037160 10 -  96802777 t-t---ag-tgcat-a-
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18699141 11 -  18957592 T-C---At-tagaa-ac
i Desmodus_rotundus.KZ672188.1                          C 0 I 155
s Dicerorhinus_sumatrensis.PEKH010003161.1                 322870 10 +    993696 T-T---AG-TGCAT-A-
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   3525 10 +    151128 T-T---AG-TGCAT-A-
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   157345  6 +    228994 C-T---AC-------TG
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3656654  6 +   4240102 T-T---GG-------TG
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 28297  6 +     28912 T-T---GG-------TG
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                36431  6 -     73477 C-T---AC-------TG
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22998921  5 -  44670279 t-t---aa-------a-
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 12597  4 +     24177 t-t---ag---------
i Eidolon_helvum.KE772537.1                             C 0 I 2
s Elaphurus_davidianus.JRFZ01086400.1                     1491812 11 +   1727528 t-t---aacTATAT-A-
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Enhydra_lutris.KZ291749.1                              85872536 10 +  99434291 T-T---AG-TGCAT-G-
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4704504  4 +   6522550 T-C---AG---------
i Eptesicus_fuscus.JH977687.1                           C 0 I 2
s Equus_asinus.JREZ01000062.1                             5853318 10 -   7175178 t-t---ag-TGCAC-A-
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13351823 10 +  41866177 t-t---aG-TGCAC-A-
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          13312 10 +     92910 t-t---aG-TGCAC-A-
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11534597  4 +  16010500 t-g---aa---------
i Erinaceus_europaeus.JH835290.1                        C 0 I 7
s Erythrocebus_patas.Contig8                             48774230  6 -  48907691 T-T---AA-------TA
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          315378 10 +    330699 T-T---AG-TGCAT-A-
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             61829 10 +     89355 T-T---AG-TGCAT-A-
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              5446  6 +     13586 T-C---AG-------TG
i Eulemur_albifrons.k141_715837                         I 9 C 0
s Eulemur_collaris.k141_311830                               5377  6 -      6809 T-C---AG-------TG
i Eulemur_collaris.k141_311830                          I 9 C 0
s Eulemur_coronatus.k141_3240342                            11854  6 +     36558 T-C---AG-------TG
i Eulemur_coronatus.k141_3240342                        I 9 C 0
s Eulemur_flavifrons.k141_903901                             8175  6 +     60246 T-C---AG-------TG
i Eulemur_flavifrons.k141_903901                        I 9 C 0
s Eulemur_fulvus.k141_653297                                11651  6 +    109717 T-C---AG-------TG
i Eulemur_fulvus.k141_653297                            I 9 C 0
s Eulemur_macaco.k141_1341545                               16037  6 +     16540 T-C---AG-------TG
i Eulemur_macaco.k141_1341545                           I 9 C 0
s Eulemur_mongoz.k141_825972                                16312  6 +     27497 T-C---AG-------TG
i Eulemur_mongoz.k141_825972                            I 9 C 0
s Eulemur_rubriventer.k141_411740                           18769  6 +     26808 T-C---AG-------TG
i Eulemur_rubriventer.k141_411740                       I 9 C 0
s Eulemur_rufus.k141_1620292                                33507  6 +     46535 T-C---AG-------TG
i Eulemur_rufus.k141_1620292                            I 9 C 0
s Eulemur_sanfordi.k141_186399                              16231  6 -     29447 T-C---AG-------TG
i Eulemur_sanfordi.k141_186399                          I 9 C 0
s Felis_catus.CM001386.2                                129893281 10 - 159252932 t-t---ag-TGCAT-A-
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129280373 10 - 158578461 t-t---ag-TGCAT-A-
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 21513 10 +     52776 T-T---AG-TGCAT-A-
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Galago_moholi.ctg555                                     211273  6 -    847004 T-C---AG-------TA
i Galago_moholi.ctg555                                  I 9 C 0
s Galago_senegalensis.k141_964197                           13647  6 -     43889 T-C---AG-------TA
i Galago_senegalensis.k141_964197                       I 9 C 0
s Galagoides_demidoff.k141_1769638                          10721  6 +     27357 T-C---GG-------TA
i Galagoides_demidoff.k141_1769638                      I 9 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               156636  6 +    324696 T-T---AG-------TG
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    181606 11 -    189561 T-T---AACTATAT-A-
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           13414  8 -     18683 C-A-TAAA-------TT
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               5704  6 -     14630 T-T---AG-------TA
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119652804  6 - 195582420 t-T---AG-------TA
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         2223  6 +     10286 T-C---AG-------TG
i Hapalemur_alaotrensis.k141_1280836                    I 9 C 0
s Hapalemur_gilberti.k141_279011                              700  6 -     11661 T-C---AG-------TG
i Hapalemur_gilberti.k141_279011                        I 9 C 0
s Hapalemur_griseus.k141_1387522                             6029  6 +     56096 T-C---AG-------TG
i Hapalemur_griseus.k141_1387522                        I 9 C 0
s Hapalemur_meridionalis.k141_186231                        29280  6 -     42470 T-C---AG-------TG
i Hapalemur_meridionalis.k141_186231                    I 9 C 0
s Hapalemur_occidentalis.k141_797938                        45903  6 -     54384 T-C---AG-------TG
i Hapalemur_occidentalis.k141_797938                    I 9 C 0
s Helogale_parvula.HelPar_flattened_line_22962              17568 10 +     53719 T-T---AG-TGCAT-A-
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                27821 11 -     91191 T-T---AACTATAT-A-
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2551436  6 +  31725842 C-T---AC-------TG
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               61259  6 +     73687 T-T---AA-------AG
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              147462 10 +    277961 T-T---AG-TGCCT-A-
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      278733  4 -    477199 T-T---AG---------
i Hipposideros_armiger.JXIK01001085.1                   C 0 I 2
s Hipposideros_galeritus.HipGal_scaffold_104691              7879  4 -      9143 T-T---AG---------
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 I 2
s Hoolock_leuconedys.ctg79                                      5114  6 -   7690867 T-T---AG-------TA
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 17637 10 -     67322 T-T---AG-TGCAT-A-
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19340  6 -    119109 C-T---AC-------TG
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       I 2 C 0
s Hylobates_abbotti.k141_164775                               195  6 -      2073 T-T---AG-------TA
i Hylobates_abbotti.k141_164775                         C 0 C 0
s Hylobates_agilis.k141_1878600                               432  6 -      1230 T-T---AG-------TA
i Hylobates_agilis.k141_1878600                         I 67 C 0
s Hylobates_pileatus_b.ContigUN                                 14625085  6 -  25970782 T-T---AG-------TA
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            2341  6 -      2977 T-T---AG-------TA
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             34244  6 -     60944 T-T---AG-------TA
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     6506  6 +     22540 T-T---AC-------TG
i Hystrix_cristata.HysCri_scaffold_50788                I 1 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7126189  6 +  13083262 T-C---AG-------TG
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_5141390                                    743  6 -      3181 T-C---AG-------TG
i Indri_indri.k141_5141390                              I 9 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               9365 10 +     17520 T-T---AG-TGCAT-A-
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8566233  6 +  11848649 T-T---AG-------TG
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               23977 10 +     37189 T-T---AG-TGCAT-A-
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          50598  6 -    147782 T-A---CG-------TG
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                     170  4 +     26176 T-C---AG---------
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 I 2
s Lemur_catta.scaffold_1                                258407584  6 - 285822530 T-C---AG-------TG
i Lemur_catta.scaffold_1                                I 9 C 0
s Lepilemur_ankaranensis.k141_884009                        24328  6 +     39228 T-C---AG-------TG
i Lepilemur_ankaranensis.k141_884009                    I 8 C 0
s Lepilemur_dorsalis.k141_134267                            53712  6 +     63517 T-C---AG-------TG
i Lepilemur_dorsalis.k141_134267                        I 8 C 0
s Lepilemur_ruficaudatus.k141_617879                        78976  6 +    116806 T-C---AG-------TG
i Lepilemur_ruficaudatus.k141_617879                    I 8 C 0
s Lepilemur_septentrionalis.k141_578524                     31967  6 -     33031 T-C---AG-------TG
i Lepilemur_septentrionalis.k141_578524                 I 8 C 0
s Leptonychotes_weddellii.KB714749.1                      3086329 10 -   3498232 T-T---AG-TGCAT-G-
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    13604  6 +     22452 T-T---AG-------TG
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            136321 10 +   3060487 T-T---AG-TGCAT-A-
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19248741  6 +  19376315 T-T---AA-------TA
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           11022  6 +     84689 T-C---AG-------TA
i Loris_lydekkerianus.k141_550999                       I 9 C 0
s Loris_tardigradus.ctg97                                 3778771  6 +   6799190 T-C---AG-------TA
i Loris_tardigradus.ctg97                               I 9 C 0
s Loxodonta_africana.GL010040.1                          20594636  6 -  62548349 T-T---AG-------AG
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11088466 10 +  39895028 T-T---AG-TGCAT-G-
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             20476  6 +     74745 T-T---AA-------TA
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12706933  6 +  12821369 T-T---AA-------TA
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                2575  6 -      3136 T-T---AA-------TA
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           47393  6 +     63263 T-T---AA-------TA
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                 2098  6 -      2568 T-T---AA-------TA
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 2683  6 -      7381 T-T---AA-------TA
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  45900  6 -     79256 T-T---AA-------TA
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196036007  6 + 196197964 T-T---AA-------TA
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11446177  6 +  11645122 T-T---AA-------TA
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   4847  6 -     46448 T-T---AA-------TA
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                2521  6 -     13212 T-T---AA-------TA
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 16200  6 -     55006 T-T---AA-------TA
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43841316  6 +  43892939 T-T---AA-------TA
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               17486  6 -     24607 T-T---AA-------TA
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               4852  6 -     27140 T-T---AA-------TA
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43437901  6 -  43563597 T-T---AA-------TA
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4450721  6 -   4543643 T-T---AA-------TA
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            146403 10 +    252755 C-T---AG-TGCAT-A-
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             36546 10 +     58827 C-T---AG-TGCAT-A-
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36874013  6 +  64221397 T-C---AG-------TG
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       64776  4 -    234502 G-T---AG---------
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 I 2
s Mellivora_capensis.MelCap_flattened_line_15433             1348 10 -     87323 T-T---AG-TGCAT-G-
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               13031  6 +     15977 T-T---CA-------TG
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1047243  6 -  26018355 T-G---GA-------TG
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_227248                    653 10 -      1377 T-T---AG-TGCAT-A-
i Mesoplodon_bidens.MesBid_scaffold_227248              C 0 C 0
s Microcebus_murinus.CM007691.1                          16510602  6 +  47401472 T-C---AG-------TG
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  34928  5 -     48017 C-T---AA-------A-
i Microgale_talazaci.MicTal_scaffold_34660              I 9 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               23050 11 -     32043 T-C---AG-TAGAT-ac
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 I 153
s Miniopterus_natalensis.LDJU01000022.1                   8210246  4 +  10048721 t-a---ag---------
i Miniopterus_natalensis.LDJU01000022.1                 I 224 I 2
s Miniopterus_schreibersii.MinSch_scaffold_24116            34899  4 +     45743 t-a---ag---------
i Miniopterus_schreibersii.MinSch_scaffold_24116        I 223 I 2
s Miopithecus_ogouensis.k141_2935907                         2450  6 +     29742 T-T---AA-------TA
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        11845 10 -    104932 T-T---AG-TGCAT-G-
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     5990  6 +      8497 T-C---AG-------TG
i Mirza_zaza.k141_226143                                I 9 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 146750 10 +    154973 T-T---AG-TGCAT-A-
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                161568 11 +    265003 T-C---AG-TAGAA-AC
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 I 149
s Moschus_moschiferus.MosMos_scaffold_78805                  1836 11 -     19904 T-T---AACTATAT-A-
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  145263 10 -    168139 T-T---AG-TGCAT-A-
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          19874  4 -    100666 T-C---AA---------
i Murina_feae.MurFea_scaffold_2254                      C 0 I 2
s Mus_caroli.LT608236.1                                  70766873  6 +  92629107 T-T---AA-------TG
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75489933  6 +  98207768 T-T---AA-------TA
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67556171  6 +  89017189 T-T---AA-------TG
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74331108  6 +  97876770 T-T---AA-------TA
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             12170  6 +     98495 C-A---AA-------TT
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4424717 10 -  28371801 T-T---AG-TGCAT-G-
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     90286  6 -    117718 C-T---AC-------TC
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               968185  4 +   8389877 T-C---AG---------
i Myotis_brandtii.KE161952.1                            C 0 I 2
s Myotis_davidii.KB114863.1                               5019858  4 +   6462685 T-C---AG---------
i Myotis_davidii.KB114863.1                             C 0 I 2
s Myotis_lucifugus.GL429887.1                             3465767  4 -   3747815 T-C---AG---------
i Myotis_lucifugus.GL429887.1                           C 0 I 2
s Myotis_myotis.MyoMyo_scaffold_6123                        10977  4 +     66751 T-C---AG---------
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 I 2
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             5371  6 -      8794 T-T---AG-------TG
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            119020  6 +    362372 T-G---GA-------TG
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               8957  6 +     48152 T-T---AA-------CA
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4485235 10 -  14209539 T-T---AG-TGCAT-G-
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3951362 10 -   4490290 t-T---AG-TGCAC-A-
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  50050 11 +     94413 T-C---GG-TAGAA-AA
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 I 152
s Nomascus_annamensis.k141_720788                             339  6 -      1065 T-T---AG-------TA
i Nomascus_annamensis.k141_720788                       C 0 C 0
s Nomascus_concolor.k141_226614                              1643  6 -      5092 T-T---AG-------TA
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_39679                              614  6 -     17937 T-T---AG-------TA
i Nomascus_gabriellae.k141_39679                        C 0 C 0
s Nomascus_siki_b.tarseq_80                             25361  6 -  18771707 T-T---AG-------TA
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  3064  6 +      4512 T-T---AG-------TA
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                31266 10 +   3668941 T-T---AG-TGCAT-G-
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65567466  6 -  95554990 T-C---AA-------TA
i Nycticebus_bengalensis.LG16                           I 9 C 0
s Nycticebus_coucang.k141_2051882                            4192  6 +      6470 T-C---AA-------TA
i Nycticebus_coucang.k141_2051882                       I 9 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65669801  6 +  89412551 T-C---AG-------TA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     I 9 C 0
s Ochotona_princeps.JH802095.1                            4996353  6 -  23139505 t-t---aa-------tG
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3685826  6 +  10294119 C-T---AC-------TG
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             679902 10 -   3126709 T-T---AG-TGCAT-G-
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1080042 11 +   1425656 T-T---AACTATAT-A-
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         37334 11 +     78940 T-T---AACTATAT-A-
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  37430  6 +     62360 T-T---GA-------TG
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7225047 10 -   7562323 T-T---AG-TGCAT-A-
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              57930  6 -     66828 T-T---AG-------AC
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141876638  6 + 163896628 T-T---AG-------TG
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      308550 10 -    505867 T-T---AG-TGCAT-G-
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        1091  6 -     53940 T-C---AG-------TA
i Otolemur_crassicaudatus.k141_505435                   I 9 C 0
s Otolemur_garnettii.GL873528.1                          18009071  6 -  38779656 T-C---AG-------TA
i Otolemur_garnettii.GL873528.1                         I 9 C 0
s Ovis_aries.CM001582.2                                 134077612 11 - 275406953 T-T---AACTATAT-A-
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      78827 11 +    140051 T-T---AACTATAT-A-
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127575070  6 - 205426864 T-T---AG-------TA
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120152224  6 - 196562556 T-T---AG-------TA
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  34678 10 +    295523 T-T---AG-TGCAT-A-
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3638412 10 +  18214204 t-t---aGC-GCAT-A-
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5028087 10 -   6340057 t-t---aG-TGCAT-A-
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1066462 11 -   1292953 T-T---AACTATAT-A-
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188156688  6 - 188283584 T-T---AA-------TA
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             5005  6 +      5367 T-T---AA-------TA
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47514073  6 +  47705337 T-T---AA-------TA
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 68049  6 -    104429 T-T---AA-------TA
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    6585  6 +     14967 T-T---AA-------TA
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 2444  6 -      7628 T-T---AA-------TA
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    116140 10 -    135482 T-T---AG-TGAAT-A-
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           5780  6 -     23713 T-C---AG-------TA
i Perodicticus_ibeanus.k141_117958                      I 9 C 0
s Perodicticus_potto.k141_713187                            25093  6 -     27972 T-C---AG-------TA
i Perodicticus_potto.k141_713187                        I 9 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      44935  6 -     45160 T-T---GG-------TG
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4950678  6 -   8017169 T-T---GA-------TG
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    13252  6 -     36578 C-T---GT-------TG
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            121652 10 -    122454 T-T---AG-TGCAC-A-
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1987485                           2471  6 -      5908 G-T---AA-------CA
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       3095  6 -     17985 G-T---AA-------CA
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            2462  6 +      7694 G-T---AA-------CA
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26740940  6 +  26888534 G-T---AA-------CA
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            97802  4 +    112873 T-C---GG---------
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 I 2
s Pithecia_albicans.k141_991845                             44204  6 -     61926 t-a---gg-------tg
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        25589  6 +     78826 T-A---GG-------TG
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              9636  6 -     15800 T-A---AG-------TG
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        12835  6 -     16101 T-A---AG-------TG
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          6063  6 +      9673 T-A---GG-------TG
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13475063  6 -  19735023 t-a---gg-------tg
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           13966  6 -     31692 T-A---GG-------TG
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           5738 10 +     21690 T-T---AG-TGCAT-A-
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       23306  6 +     44506 T-A---GG-------TG
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        23518  6 +     67491 T-A---GG-------TG
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      13758  6 -     98129 T-A---GG-------TG
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     23358  6 +    147771 T-A---GG-------TG
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        23615  6 -     23762 T-A---GG-------TG
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          4077  6 -     55515 T-A---GG-------TG
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         23431  6 +    152463 T-A---GG-------TG
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       1148  6 -    119457 T-A---GG-------TG
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         13154  6 +    134592 T-A---GG-------TG
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          23741  6 -     75465 T-A---GG-------TG
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              187590  6 -    373494 T-T---AG-------TA
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19808238  6 +  19899266 T-T---AG-------TA
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               6201  6 -     15069 T-T---AA-------CA
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              6331  6 +     14865 T-T---AA-------CA
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                2369  6 -      9567 T-T---AA-------AG
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6848961  6 +  12164890 T-C---AG-------TG
i Prolemur_simus.MPIZ01000048.1                         I 9 C 0
s Propithecus_coquerelli.NW_012147863.1                     17268  6 -     30946 T-C---AG-------tg
i Propithecus_coquerelli.NW_012147863.1                 I 9 C 0
s Propithecus_coronatus.k141_1353159                         4025  6 +     11805 T-C---AG-------TG
i Propithecus_coronatus.k141_1353159                    I 9 C 0
s Propithecus_diadema.k141_577245                           43368  6 +     52369 T-C---AG-------TG
i Propithecus_diadema.k141_577245                       I 9 C 0
s Propithecus_edwardsi.k141_1317105                         35755  6 -     44753 T-C---AG-------TG
i Propithecus_edwardsi.k141_1317105                     I 9 C 0
s Propithecus_perrieri.k141_7554                            17679  6 +     27322 T-C---AG-------TG
i Propithecus_perrieri.k141_7554                        I 9 C 0
s Propithecus_tattersalli.k141_907138                       17315  6 -     53241 T-C---AG-------TG
i Propithecus_tattersalli.k141_907138                   I 9 C 0
s Propithecus_verreauxi.k141_158021                         39579  6 -     48185 T-C---AG-------TG
i Propithecus_verreauxi.k141_158021                     I 9 C 0
s Psammomys_obesus.NESX01026517.1                           34580  6 +     77221 T-T---CA-------TG
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            4213 11 -     27784 t-c---ag-tagac-ac
i Pteronotus_parnellii.KE867983.1                       C 0 I 151
s Pteronura_brasiliensis.PteBra_flattened_line_1343        247027 10 -    344369 T-T---AG-TGCAT-G-
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13246330  4 -  17261082 t-t---ag---------
i Pteropus_alecto.KB031157.1                            C 0 I 2
s Pteropus_vampyrus.KN525959.1                             604281  4 -   3946241 T-T---AG---------
i Pteropus_vampyrus.KN525959.1                          C 0 I 2
s Puma_concolor.QAVW01000427.1                          131534665 10 - 161321710 t-t---aG-TGCAT-A-
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             30322  6 +     56732 T-T---AA-------CA
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6806810  6 +   6970761 T-T---AA-------CA
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             6201  6 +     18040 T-T---AA-------CA
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                16139 11 +     68503 T-T---AACTATAT-A-
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1788157  4 +   2252614 T-T---AG---------
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 I 2
s Rhinopithecus_bieti.k119_554384                             613  4 -     17045 T-T---A---------A
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206378090  4 - 206558726 T-T---A---------A
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44857004  4 -  45163003 T-T---A---------A
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                19664  4 +    109198 T-T---AG---------
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 I 2
s Saiga_tatarica.SaiTat_scaffold_82192                       8288 11 +     12214 T-T---AACTATAT-A-
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15673168  6 -  43202129 T-A---GG-------TG
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        5081  6 +     34089 T-A---GG-------TG
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              5023  6 -     60842 T-G---GG-------TG
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              5116  6 +     67014 T-A---GG-------TG
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              5094  6 +     60816 T-A---GG-------TG
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 5031  6 -     76454 T-A---GG-------TG
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17341756  6 -  30362882 T-A---GG-------TA
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         21117  6 -     62485 T-A---GG-------TA
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   32621  4 -    114521 T-T---AG---------
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 I 1
s Semnopithecus_entellus.k141_1572367                        3814  6 +     15331 T-T---AA-------CA
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       9207  6 +     20762 T-T---AA-------CA
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         119210  6 +    130994 T-T---AA-------CA
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           37996  6 +     46263 T-T---AA-------CA
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     31116  6 +     42640 T-T---AA-------CA
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        14156  6 +     30600 T-T---AA-------CA
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  100621  6 -    120886 T-T---GA-------TG
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            19220 11 +    739146 G-T---AT-TGCAT-CT
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17766403  4 -  27805282 T-T---AA---------
i Sorex_araneus.JH798170.1                              I 14 I 5
s Spermophilus_dauricus.KZ294190.1                        2240105  6 +   2842873 T-C---AG-------TG
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             235146 10 -    276980 T-T---AG-TGCAC-A-
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            27923 10 +     62062 T-T---AG-TGCAT-A-
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189272201 10 + 218635234 T-T---AG-TATAC-A-
i Sus_scrofa.CM000824.4                                 C 0 I 1
s Symphalangus_syndactylus.tarseq_24                        15346  6 -  13920577 T-T---AG-------TA
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                 592  4 +     20549 T-C---AG---------
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 I 2
s Tamandua_tetradactyla.TamTet_scaffold_26877               15036  6 +     45698 G-T---AG-------TG
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      807459 10 +   1148477 T-T---AG-TGCAT-A-
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  58170 10 +     99546 T-T---AG-TGCAT-A-
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               26885  5 +     42269 T-T---AG-------T-
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               60201  5 +     65473 T-T---AG-------T-
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194008210  6 - 194193292 T-T---AA-------TA
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             39052  6 -     47444 C-T---GT-------TG
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  5855  6 +      6782 T-T---AA-------CG
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  136210 11 -    259118 T-C---AG-TA-GTaac
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 I 151
s Trachypithecus_auratus.k141_738098                        27312  6 +     38948 T-T---AA-------CA
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   21044  6 -     32910 T-T---AA-------CA
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      2430  6 -     12939 T-T---AA-------CA
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       2366  6 -     14244 T-T---AA-------CA
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           43765  6 -     54611 T-T---AA-------CA
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        1568  6 -     11566 T-T---AA-------CA
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     3745  6 -     15592 T-T---AA-------CA
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          2401  6 +     14371 T-T---AA-------CA
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                    682  6 +     12481 T-T---AA-------CA
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                         558  6 -     24393 T-T---AA-------CA
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       5804  6 -     28054 T-T---AA-------CA
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44660604  6 -  44834318 T-T---AA-------CA
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       2912  6 +     13828 T-T---AA-------CA
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   5514 10 +     90398 T-T---AA-TATAT-A-
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16085311  6 +  31416278 T-T---AG-------AG
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2793253  6 -   3938065 T-T---AA-------TG
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    5453  6 +     13056 T-T---AA-------TG
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69313763 10 -  96451834 t-t---ag-tgcat-a-
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   1666  4 +     10241 T-T---AG---------
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 I 1
s Ursus_maritimus.KK498671.1                              6515156 10 +  28682327 T-C---AG-TGCAT-A-
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  5658  6 -     20643 T-C---AG-------TG
i Varecia_rubra.k141_432109                             I 9 C 0
s Varecia_variegata.k141_775891                             25199  6 -     33872 T-C---AG-------TG
i Varecia_variegata.k141_775891                         I 9 C 0
s Vicugna_pacos.KN269600.1                                1525011 10 -   2331223 t-T---GG-TGTAT-A-
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                138646 10 -    281493 T-T---AG-TGCAT-G-
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       127220  6 -    134049 T-C---AG-------TG
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        214629 10 -    227762 T-T---AG-TGCAT-G-
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     15548  6 -     20485 T-T---AC-------TG
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           7262 10 -      8775 T-T---AG-TGCAT-A-
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                701732 90 +    802869 I
e Elephantulus_edwardii.JH947210.1                        7816099 793 +  15467074 I
e Crocidura_indochinensis.CroInd_scaffold_848148              199  0 +      1327 C
e Hylobates_klossii.k141_285563                               343 193 +      1026 I
e Microtus_ochrogaster.CM001673.1                        22820341  4 -  98408828 I
e Rattus_norvegicus.chr11                                13915860 1475 +  90463843 I
e Ondatra_zibethicus.OndZib_scaffold_6821                  125594  4 +    145789 I
e Graphiurus_murinus.GraMur_scaffold_4493                   77863  0 +    118900 C
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I
e Ellobius_talpinus.LOJH01090055.1                           7151  4 -      7838 I
e Ellobius_lutescens.LOEQ01003611.1                        240029  1 -    369425 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               12197 1 +    209709 T
s Acomys_cahirinus.AcoCah_scaffold_1625                    112906 1 -    189883 A
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   17227 1 -     22067 C
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   1707 1 -     60446 T
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         2427 1 -     29318 T
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         1362 1 +     38766 T
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          2321 1 -     80423 T
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            10624 1 -     18050 T
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_1710068                                339 1 +      1555 T
i Alouatta_caraya.k141_1710068                          C 0 C 0
s Alouatta_discolor.k141_811576                             11297 1 -     21359 T
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                 918 1 +      2129 T
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_2177643                           302 1 -      1868 T
i Alouatta_macconnelli.k141_2177643                     C 0 C 0
s Alouatta_nigerrima.k141_3537692                             351 1 +      1660 T
i Alouatta_nigerrima.k141_3537692                       C 0 C 0
s Alouatta_palliata.k141_2764429                              266 1 -      1480 T
i Alouatta_palliata.k141_2764429                        I 6 C 0
s Alouatta_puruensis.k141_1284840                            4344 1 -      4927 T
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_1531728                             481 1 -      1692 T
i Alouatta_seniculus.k141_1531728                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      390825 1 -    631301 T
i Anoura_caudifer.AnoCau_scaffold_422                   I 145 I 45
s Aotus_azarae.k141_3170768                                 62976 1 +     78111 C
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            5918 1 +     22701 C
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5749875 1 +   9889416 C
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             6464 1 -    104377 C
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               6466 1 +     23246 C
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     4020 1 +      5067 C
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        1385 1 +      9265 C
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 9241 1 -     29036 t
i Artibeus_jamaicensis.ArtJam_scaffold_41619            I 155 I 46
s Ateles_geoffroyi_b.tarseq_2582                             9539735 1 +  39197703 T
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             61006 1 +     85812 T
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                12019 1 +     89302 T
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             16522 1 -     58268 T
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             64514 1 +    119057 T
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               6485 1 -     25888 T
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 7116 1 -     16375 C
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                                735 1 +      6337 C
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Cacajao_ayresi.k141_724503                               114372 1 -    171031 t
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 13401 1 +    125063 t
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                15444 1 -    216513 t
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        7987 1 -    134917 t
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               60030 1 +     67245 t
i Carollia_perspicillata.CarPer_scaffold_4436           I 154 I 40
s Castor_canadensis.CasCan_scaffold_47037                   31462 1 +     33760 C
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15786961 1 -  24422027 C
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15798897 1 -  24440124 C
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       177088 1 +    436027 C
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18891218 1 -  29618158 C
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 8762 1 -     26817 C
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                13005 1 +     25043 C
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cercocebus_atys.KQ010443.1                              6555653 1 +   6739814 T
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      27130 1 +     60454 T
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          2336 1 -     21101 T
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         59645 1 -    107033 T
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        2535 1 -     17608 T
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          30031 1 +     30494 T
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          58876 1 -     59240 T
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          2577 1 +     16677 T
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           24736 1 +     35983 T
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11991262 1 +  12117833 T
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46478022 1 +  46592721 T
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      41572 1 -     45581 T
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       2578 1 +     35577 T
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        2353 1 -     25661 T
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        2333 1 -     17744 T
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        21948 1 +     37128 T
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           3102 1 -      6963 C
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           59396 1 -     68416 C
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            8441 1 +     13308 C
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             6029 1 -     18223 C
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             23047 1 +     25473 C
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           42087 1 +     57117 C
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          46766 1 +     54541 C
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15962087 1 +  43084221 C
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         71573 1 +    196370 c
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          15753 1 +     40510 c
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15139468 1 -  15256731 T
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      34549 1 -     53260 T
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101145109 1 + 101219884 T
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                16810 1 -     21363 C
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           762113 1 +    964067 c
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10886878 1 +  10971483 T
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147665043 1 + 156195979 T
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            17028 1 +     23629 T
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         1007 1 -      5782 T
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    I 2 I 325
s Cricetomys_gambianus.CriGam_scaffold_949                 278880 1 -    399297 A
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53029558 1 +  72327488 A
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  208554 1 -    956709 T
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 31001 1 -     67205 A
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                18123 1 +     26546 C
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             59211 1 -    236241 C
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          183987 1 -   6883506 c
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16845253 1 +  31942871 C
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18699307 1 -  18957592 t
i Desmodus_rotundus.KZ672188.1                          I 155 I 41
s Dinomys_branickii.DinBra_scaffold_1996                   157351 1 +    228994 C
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3656660 1 +   4240102 C
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 28303 1 +     28912 C
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                36437 1 -     73477 C
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Eidolon_helvum.KE772537.1                                 12603 1 +     24177 T
i Eidolon_helvum.KE772537.1                             I 2 C 0
s Eptesicus_fuscus.JH977687.1                             4704510 1 +   6522550 T
i Eptesicus_fuscus.JH977687.1                           I 2 C 0
s Erinaceus_europaeus.JH835290.1                         11534608 1 +  16010500 A
i Erinaceus_europaeus.JH835290.1                        I 7 I 4
s Erythrocebus_patas.Contig8                             48774236 1 -  48907691 T
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eulemur_albifrons.k141_715837                              5452 1 +     13586 C
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               5383 1 -      6809 C
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            11860 1 +     36558 C
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             8181 1 +     60246 C
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                11657 1 +    109717 C
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               16043 1 +     16540 C
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                16318 1 +     27497 C
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           18775 1 +     26808 C
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                33513 1 +     46535 C
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              16237 1 -     29447 C
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Galago_moholi.ctg555                                     211279 1 -    847004 T
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           13653 1 -     43889 T
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          10727 1 +     27357 T
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               156642 1 +    324696 C
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           13422 1 -     18683 T
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               5710 1 -     14630 T
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119652810 1 - 195582420 T
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         2229 1 +     10286 C
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                              706 1 -     11661 C
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             6035 1 +     56096 C
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        29286 1 -     42470 C
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        45909 1 -     54384 C
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2551442 1 +  31725842 C
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               61265 1 +     73687 C
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      278739 1 -    477199 t
i Hipposideros_armiger.JXIK01001085.1                   I 2 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              7885 1 -      9143 T
i Hipposideros_galeritus.HipGal_scaffold_104691         I 2 C 0
s Hoolock_leuconedys.ctg79                                      5120 1 -   7690867 T
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19346 1 -    119109 C
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_164775                               201 1 -      2073 T
i Hylobates_abbotti.k141_164775                         C 0 C 0
s Hylobates_agilis.k141_1878600                               438 1 -      1230 T
i Hylobates_agilis.k141_1878600                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14625091 1 -  25970782 T
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            2347 1 -      2977 T
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             34250 1 -     60944 T
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     6512 1 +     22540 C
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7126195 1 +  13083262 C
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_5141390                                    749 1 -      3181 C
i Indri_indri.k141_5141390                              C 0 C 0
s Jaculus_jaculus.JH725517.1                              8566239 1 +  11848649 C
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Lagothrix_lagothricha.k141_12968                          50604 1 -    147782 T
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                     176 1 +     26176 T
i Lasiurus_borealis.LasBor_scaffold_59542               I 2 I 2
s Lemur_catta.scaffold_1                                258407590 1 - 285822530 C
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        24334 1 +     39228 C
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            53718 1 +     63517 C
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        78982 1 +    116806 C
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     31973 1 -     33031 C
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    13610 1 +     22452 C
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lophocebus_aterrimus.ctg55                             19248747 1 +  19376315 T
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           11028 1 +     84689 C
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3778777 1 +   6799190 C
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20594642 1 -  62548349 C
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Macaca_arctoides.k141_2201161                             20482 1 +     74745 T
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12706939 1 +  12821369 T
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                2581 1 -      3136 T
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           47399 1 +     63263 T
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                 2104 1 -      2568 T
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 2689 1 -      7381 T
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  45906 1 -     79256 T
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196036013 1 + 196197964 T
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11446183 1 +  11645122 T
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   4853 1 -     46448 T
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                2527 1 -     13212 T
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 16206 1 -     55006 T
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43841322 1 +  43892939 T
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               17492 1 -     24607 T
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               4858 1 -     27140 T
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43437907 1 -  43563597 T
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4450727 1 -   4543643 T
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36874019 1 +  64221397 C
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       64782 1 -    234502 G
i Megaderma_lyra.MegLyr_scaffold_3562                   I 2 I 239
s Meriones_unguiculatus.MerUng_scaffold_52233               13037 1 +     15977 A
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1047249 1 -  26018355 A
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Microcebus_murinus.CM007691.1                          16510608 1 +  47401472 C
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               23214 1 -     32043 t
i Micronycteris_hirsuta.MicHir_scaffold_37978           I 153 I 46
s Miniopterus_natalensis.LDJU01000022.1                   8210252 1 +  10048721 t
i Miniopterus_natalensis.LDJU01000022.1                 I 2 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            34905 1 +     45743 t
i Miniopterus_schreibersii.MinSch_scaffold_24116        I 2 C 0
s Miopithecus_ogouensis.k141_2935907                         2456 1 +     29742 T
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirza_zaza.k141_226143                                     5996 1 +      8497 C
i Mirza_zaza.k141_226143                                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                161728 1 +    265003 t
i Mormoops_blainvillei.MorMeg_scaffold_2952             I 149 I 52
s Murina_feae.MurFea_scaffold_2254                          19880 1 -    100666 T
i Murina_feae.MurFea_scaffold_2254                      I 2 C 0
s Mus_caroli.LT608236.1                                  70766879 1 +  92629107 A
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75489939 1 +  98207768 A
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67556177 1 +  89017189 A
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74331114 1 +  97876770 A
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             12176 1 +     98495 T
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     90292 1 -    117718 C
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               968191 1 +   8389877 T
i Myotis_brandtii.KE161952.1                            I 2 C 0
s Myotis_davidii.KB114863.1                               5019864 1 +   6462685 T
i Myotis_davidii.KB114863.1                             I 2 C 0
s Myotis_lucifugus.GL429887.1                             3465773 1 -   3747815 T
i Myotis_lucifugus.GL429887.1                           I 2 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        10983 1 +     66751 T
i Myotis_myotis.MyoMyo_scaffold_6123                    I 2 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             5377 1 -      8794 C
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            119026 1 +    362372 C
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               8963 1 +     48152 C
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  50213 1 +     94413 T
i Noctilio_leporinus.NocLep_scaffold_12062              I 152 I 77
s Nomascus_annamensis.k141_720788                             345 1 -      1065 T
i Nomascus_annamensis.k141_720788                       C 0 C 0
s Nomascus_concolor.k141_226614                              1649 1 -      5092 T
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_39679                              620 1 -     17937 T
i Nomascus_gabriellae.k141_39679                        C 0 C 0
s Nomascus_siki_b.tarseq_80                             25367 1 -  18771707 T
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  3070 1 +      4512 T
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nycticebus_bengalensis.LG16                            65567472 1 -  95554990 C
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            4198 1 +      6470 C
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65669807 1 +  89412551 C
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4996359 1 -  23139505 G
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3685832 1 +  10294119 A
i Octodon_degus.JH651621.1                              C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  37436 1 +     62360 A
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              57936 1 -     66828 T
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141876644 1 + 163896628 C
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        1097 1 -     53940 T
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18009077 1 -  38779656 T
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Pan_paniscus.CM003386.1                               127575076 1 - 205426864 T
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120152230 1 - 196562556 T
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Papio_anubis.CM001492.2                               188156694 1 - 188283584 T
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             5011 1 +      5367 T
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47514079 1 +  47705337 T
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 68055 1 -    104429 T
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    6591 1 +     14967 T
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 2450 1 -      7628 T
i Papio_ursinus.k141_1345919                            C 0 C 0
s Perodicticus_ibeanus.k141_117958                           5786 1 -     23713 C
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            25099 1 -     27972 C
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      44941 1 -     45160 C
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4950684 1 -   8017169 A
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    13258 1 -     36578 A
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Piliocolobus_badius.k141_1987485                           2477 1 -      5908 T
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       3101 1 -     17985 T
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            2468 1 +      7694 T
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26740946 1 +  26888534 T
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            97808 1 +    112873 T
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        I 2 C 0
s Pithecia_albicans.k141_991845                             44210 1 -     61926 c
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        25595 1 +     78826 C
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              9642 1 -     15800 C
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        12841 1 -     16101 C
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          6069 1 +      9673 C
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13475069 1 -  19735023 c
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           13972 1 -     31692 C
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       23312 1 +     44506 C
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        23524 1 +     67491 C
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      13764 1 -     98129 C
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     23364 1 +    147771 C
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        23621 1 -     23762 C
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          4083 1 -     55515 C
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         23437 1 +    152463 C
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       1154 1 -    119457 C
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         13160 1 +    134592 C
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          23747 1 -     75465 C
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              187596 1 -    373494 T
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19808244 1 +  19899266 T
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               6207 1 -     15069 C
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              6337 1 +     14865 C
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                2375 1 -      9567 C
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6848967 1 +  12164890 C
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     17274 1 -     30946 c
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         4031 1 +     11805 C
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           43374 1 +     52369 C
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         35761 1 -     44753 C
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            17685 1 +     27322 C
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       17321 1 -     53241 C
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         39585 1 -     48185 C
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           34586 1 +     77221 A
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            4375 1 -     27784 a
i Pteronotus_parnellii.KE867983.1                       I 151 I 43
s Pteropus_alecto.KB031157.1                             13246336 1 -  17261082 T
i Pteropus_alecto.KB031157.1                            I 2 C 0
s Pteropus_vampyrus.KN525959.1                             604287 1 -   3946241 T
i Pteropus_vampyrus.KN525959.1                          I 2 C 0
s Pygathrix_cinerea.k141_374971                             30328 1 +     56732 C
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6806816 1 +   6970761 C
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             6207 1 +     18040 C
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1788163 1 +   2252614 T
i Rhinolophus_sinicus.LVEH01000179.1                    I 2 C 0
s Rhinopithecus_bieti.k119_554384                             617 1 -     17045 C
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206378094 1 - 206558726 C
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44857008 1 -  45163003 C
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                19670 1 +    109198 T
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            I 2 C 0
s Saimiri_boliviensis.NW_024100938.1                     15673174 1 -  43202129 C
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        5087 1 +     34089 C
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              5029 1 -     60842 C
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              5122 1 +     67014 C
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              5100 1 +     60816 C
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 5037 1 -     76454 C
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17341762 1 -  30362882 T
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         21123 1 -     62485 T
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Semnopithecus_entellus.k141_1572367                        3820 1 +     15331 C
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       9213 1 +     20762 C
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         119216 1 +    130994 C
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           38002 1 +     46263 C
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     31122 1 +     42640 C
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        14162 1 +     30600 C
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  100627 1 -    120886 A
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            19231 1 +    739146 A
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 I 3
s Sorex_araneus.JH798170.1                               17766412 1 -  27805282 A
i Sorex_araneus.JH798170.1                              I 5 I 24
s Spermophilus_dauricus.KZ294190.1                        2240111 1 +   2842873 C
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        15352 1 -  13920577 T
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                 598 1 +     20549 T
i Tadarida_brasiliensis.TadBra_scaffold_61492           I 2 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               15042 1 +     45698 C
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194008216 1 - 194193292 T
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             39058 1 -     47444 C
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  5861 1 +      6782 C
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  136372 1 -    259118 t
i Tonatia_saurophila.TonSau_scaffold_3334               I 151 I 45
s Trachypithecus_auratus.k141_738098                        27318 1 +     38948 C
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   21050 1 -     32910 C
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      2436 1 -     12939 C
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       2372 1 -     14244 C
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           43771 1 -     54611 C
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        1574 1 -     11566 C
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     3751 1 -     15592 C
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          2407 1 +     14371 C
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                    688 1 +     12481 C
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                         564 1 -     24393 C
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       5810 1 -     28054 C
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44660610 1 -  44834318 C
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       2918 1 +     13828 C
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Trichechus_manatus.JH594618.1                          16085317 1 +  31416278 C
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2793259 1 -   3938065 C
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    5459 1 +     13056 C
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Varecia_rubra.k141_432109                                  5664 1 -     20643 C
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             25205 1 -     33872 C
i Varecia_variegata.k141_775891                         C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       127226 1 -    134049 T
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     15554 1 -     20485 C
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                701732 90 +    802869 I
e Suricata_suricatta.SurSur_flattened_line_20339            27933 0 +     62062 C
e Ziphius_cavirostris.ZipCav_flattened_line_127025           7272 0 -      8775 C
e Zalophus_californianus.ZalCal_flattened_line_4097        214639 0 -    227762 C
e Vulpes_lagopus.VulLag_flattened_line_2045                138656 0 -    281493 C
e Vicugna_pacos.KN269600.1                                1525021 0 -   2331223 C
e Ursus_maritimus.KK498671.1                              6515166 0 +  28682327 C
e Uropsilus_gracilis.UroGra_scaffold_69449                   1670 1 +     10241 I
e Tursiops_truncatus.MRVK01000923.1                      69313773 0 -  96451834 C
e Tragulus_javanicus.TraJav_scaffold_14717                   5524 0 +     90398 C
e Tapirus_terrestris.TapTer_scaffold_14939                  58180 0 +     99546 C
e Tapirus_indicus.TapInd_scaffold_176                      807469 0 +   1148477 C
e Sus_scrofa.CM000824.4                                 189272211 1 + 218635234 I
e Spilogale_gracilis.SpiGra_flattened_line_905             235156 0 -    276980 C
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   32625 1 -    114521 I
e Saiga_tatarica.SaiTat_scaffold_82192                       8299 0 +     12214 C
e Rangifer_tarandus.RanTarSib_scaffold_24239                16150 0 +     68503 C
e Puma_concolor.QAVW01000427.1                          131534675 0 - 161321710 C
e Pteronura_brasiliensis.PteBra_flattened_line_1343        247037 0 -    344369 C
e Platanista_gangetica.PlaMin_flattened_line_72990           5748 0 +     21690 C
e Phocoena_phocoena.PhoPho_flattened_line_11948            121662 0 -    122454 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    116150 0 -    135482 C
e Pantholops_hodgsonii.KE114631.1                         1066473 0 -   1292953 C
e Panthera_tigris.KE721879.1                              5028097 0 -   6340057 C
e Panthera_pardus.KV860323.1                              3638422 0 +  18214204 C
e Panthera_onca.PanOnc_flattened_line_1615                  34688 0 +    295523 C
e Ovis_canadensis.OviCan_scaffold_6251                      78838 0 +    140051 C
e Ovis_aries.CM001582.2                                 134077623 0 - 275406953 C
e Otocyon_megalotis.JAEUCK010005121.1                      308560 0 -    505867 C
e Orcinus_orca.KB316965.1                                 7225057 0 -   7562323 C
e Okapia_johnstoni.LVCL01S0017931.1                         37345 0 +     78940 C
e Odocoileus_virginianus.KZ101650.1                       1080053 0 +   1425656 C
e Odobenus_rosmarus.KB229369.1                             679912 0 -   3126709 C
e Nyctereutes_procyonoides.CAJHUB010000786.1                31276 0 +   3668941 C
e Neophocaena_asiaeorientalis.KZ688543.1                  3951372 0 -   4490290 C
e Neomonachus_schauinslandi.NINY01007774.1                4485245 0 -  14209539 C
e Mustela_putorius.JH417978.1                             4424727 0 -  28371801 C
e Mungos_mungo.MunMun_flattened_line_8729                  145273 0 -    168139 C
e Moschus_moschiferus.MosMos_scaffold_78805                  1847 0 -     19904 C
e Monodon_monoceros.MonMon_M_scaffold_5598                 146760 0 +    154973 C
e Mirounga_angustirostris.MirAng_flattened_line_8852        11855 0 -    104932 C
e Microgale_talazaci.MicTal_scaffold_34660                  34933 0 -     48017 C
e Mesoplodon_bidens.MesBid_scaffold_227248                    663 0 -      1377 C
e Mellivora_capensis.MelCap_flattened_line_15433             1358 0 -     87323 C
e Manis_pentadactyla.KN017078.1                             36556 0 +     58827 C
e Manis_javanica.JSZB01003966.1                            146413 0 +    252755 C
e Lycaon_pictus.CM007556.1                               11088476 0 +  39895028 C
e Lipotes_vexillifer.KE558548.1                            136331 0 +   3060487 C
e Leptonychotes_weddellii.KB714749.1                      3086339 0 -   3498232 C
e Kogia_breviceps.KogBre_flattened_line_35920               23987 0 +     37189 C
e Inia_geoffrensis.IniGeo_flattened_line_66725               9375 0 +     17520 C
e Hyaena_hyaena.HyaHya_flattened_line_20729                 17647 0 -     67322 C
e Hippopotamus_amphibius.HipAmp_scaffold_1308              147472 0 +    277961 C
e Hemitragus_hylocrius.HemHyl_scaffold_16669                27832 0 -     91191 C
e Helogale_parvula.HelPar_flattened_line_22962              17578 0 +     53719 C
e Giraffa_tippelskirchi.LVKQ01S012154.1                    181617 0 -    189561 C
e Felis_nigripes.FelNig_flattened_line_8080                 21523 0 +     52776 C
e Felis_catus_fca126.CM031420.1                         129280383 0 - 158578461 C
e Eubalaena_japonica.EubJap_flattened_line_7756             61839 0 +     89355 C
e Eschrichtius_robustus.EscRob_flattened_line_685          315388 0 +    330699 C
e Equus_przewalskii.ATBW01073585.1                          13322 0 +     92910 C
e Equus_caballus.CM000402.2                              13351833 0 +  41866177 C
e Equus_asinus.JREZ01000062.1                             5853328 0 -   7175178 C
e Enhydra_lutris.KZ291749.1                              85872546 0 +  99434291 C
e Elephantulus_edwardii.JH947210.1                        7816099 793 +  15467074 I
e Elaphurus_davidianus.JRFZ01086400.1                     1491823 0 +   1727528 C
e Echinops_telfairi.JH980316.1                           22998926 0 -  44670279 C
e Diceros_bicornis.DicBicMic_scaffold_9545                   3535 0 +    151128 C
e Dicerorhinus_sumatrensis.PEKH010003161.1                 322880 0 +    993696 C
e Delphinapterus_leucas.KZ290064.1                       80037170 0 -  96802777 C
e Cryptoprocta_ferox.CryFer_flattened_line_19014            52372 0 -     70449 C
e Crocidura_indochinensis.CroInd_scaffold_848148              199 0 +      1327 C
e Condylura_cristata.JH655880.1                          60613938 1 +  78930452 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_160623         3988 0 -      9338 C
e Catagonus_wagneri.CatWag_scaffold_1305                   159240 1 -    276539 I
e Capra_hircus.CM004562.1                               135706776 0 - 157403528 C
e Capra_aegagrus.CM003214.1                              21325548 0 + 157394656 C
e Canis_lupus_orion.HG994411.1                           16456035 0 -  44759192 C
e Canis_lupus_familiaris.chr31                           11089020 0 +  39895921 C
e Canis_lupus_dingo.QKWQ01001993.1                       11266486 0 -  35597290 C
e Canis_lupus_VD.CanFam_VD_scaffold_16982                   14844 0 +     87036 C
e CanFam4.chr31                                          11519819 0 +  39901454 C
e Camelus_ferus.KB016973.1                                2973353 0 +   6889770 C
e Camelus_dromedarius.KN271192.1                           397617 0 -  15254737 C
e Camelus_bactrianus.KN276303.1                           3219916 0 -   8989139 C
e Bubalus_bubalis.KI419065.1                              1233126 0 -   1914593 C
e Bos_taurus.CM000177.6                                 136296047 0 - 158972876 C
e Bos_mutus.JH883513.1                                     572855 0 -    998990 C
e Bos_indicus.CM003021.1                                138140314 0 - 161108492 C
e Bison_bison.KN264915.1                                  6560205 0 +   6870073 C
e Beatragus_hunteri.BeaHun_scaffold_21644                   43542 0 -     72089 C
e Balaenoptera_bonaerensis.DF502048.1                        5718 0 -     13118 C
e Balaenoptera_acutorostrata.KI537095.1                  26380546 0 +  51448160 C
e Antilocapra_americana.AntAmePen_scaffold_42841            31053 0 +     33004 C
e Ammotragus_lervia.NIVO01013474.1                        3520472 0 +   4113121 C
e Ailurus_fulgens.LNAC01000003.1                          7095021 0 -  16596857 C
e Ailuropoda_melanoleuca.LNAT01000321.1                  10657673 0 +  23371972 C
e Acinonyx_jubatus.LLWD01000356.1                         2034336 0 +   3721120 C
e Hylobates_klossii.k141_285563                               343 193 +      1026 I
e Microtus_ochrogaster.CM001673.1                        22820341 4 -  98408828 I
e Tarsius_wallacei.k141_48636                               60206 0 +     65473 C
e Tarsius_lariang.k141_609102                               26890 0 +     42269 C
e Rattus_norvegicus.chr11                                13915860 1475 +  90463843 I
e Ondatra_zibethicus.OndZib_scaffold_6821                  125594 4 +    145789 I
e Graphiurus_murinus.GraMur_scaffold_4493                   77863 0 +    118900 C
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I
e Ellobius_talpinus.LOJH01090055.1                           7151 4 -      7838 I
e Ellobius_lutescens.LOEQ01003611.1                        240029 1 -    369425 I
e Cephalopachus_bancanus.k141_702587                         8444 0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          309416 0 +    345090 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               12198 2 +    209709 G--C
s Acomys_cahirinus.AcoCah_scaffold_1625                    112907 2 -    189883 A--T
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   17228 2 -     22067 C--T
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   1708 2 -     60446 G--C
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         2428 2 -     29318 G--C
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         1363 2 +     38766 G--C
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          2322 2 -     80423 G--C
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            10625 2 -     18050 G--C
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_1710068                                340 2 +      1555 G--T
i Alouatta_caraya.k141_1710068                          C 0 C 0
s Alouatta_discolor.k141_811576                             11298 2 -     21359 G--C
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                 919 2 +      2129 G--C
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_2177643                           303 2 -      1868 G--C
i Alouatta_macconnelli.k141_2177643                     C 0 C 0
s Alouatta_nigerrima.k141_3537692                             352 2 +      1660 G--C
i Alouatta_nigerrima.k141_3537692                       C 0 C 0
s Alouatta_palliata.k141_2764429                              267 2 -      1480 G--C
i Alouatta_palliata.k141_2764429                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            4345 2 -      4927 G--C
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_1531728                             482 2 -      1692 G--C
i Alouatta_seniculus.k141_1531728                       C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      390871 2 -    631301 A--G
i Anoura_caudifer.AnoCau_scaffold_422                   I 45 C 0
s Aotus_azarae.k141_3170768                                 62977 2 +     78111 A--C
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            5919 2 +     22701 A--C
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5749876 2 +   9889416 A--C
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             6465 2 -    104377 A--C
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               6467 2 +     23246 A--C
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     4021 2 +      5067 A--T
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        1386 2 +      9265 A--T
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 9288 2 -     29036 A--G
i Artibeus_jamaicensis.ArtJam_scaffold_41619            I 46 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9539736 2 +  39197703 G--T
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             61007 2 +     85812 G--C
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                12020 2 +     89302 G--C
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             16523 2 -     58268 G--T
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             64515 2 +    119057 G--C
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               6486 2 -     25888 G--C
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 7117 2 -     16375 A--T
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                                736 2 +      6337 A--T
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Cacajao_ayresi.k141_724503                               114373 2 -    171031 g--c
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 13402 2 +    125063 g--c
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                15445 2 -    216513 g--c
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        7988 2 -    134917 g--c
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               60071 2 +     67245 A--G
i Carollia_perspicillata.CarPer_scaffold_4436           I 40 C 0
s Castor_canadensis.CasCan_scaffold_47037                   31463 2 +     33760 A--T
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15786962 2 -  24422027 A--T
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15798898 2 -  24440124 A--T
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       177089 2 +    436027 A--T
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18891219 2 -  29618158 G--C
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 8763 2 -     26817 G--C
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                13006 2 +     25043 G--C
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cercocebus_atys.KQ010443.1                              6555654 2 +   6739814 G--C
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      27131 2 +     60454 G--C
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          2337 2 -     21101 G--C
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         59646 2 -    107033 G--C
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        2536 2 -     17608 G--C
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          30032 2 +     30494 G--C
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          58877 2 -     59240 G--C
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          2578 2 +     16677 G--C
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           24737 2 +     35983 G--C
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11991263 2 +  12117833 G--C
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46478023 2 +  46592721 G--C
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      41573 2 -     45581 G--C
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       2579 2 +     35577 G--C
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        2354 2 -     25661 G--C
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        2334 2 -     17744 G--C
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        21949 2 +     37128 G--C
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           3103 2 -      6963 A--T
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           59397 2 -     68416 A--T
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            8442 2 +     13308 A--T
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             6030 2 -     18223 A--C
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             23048 2 +     25473 A--C
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           42088 2 +     57117 A--C
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          46767 2 +     54541 A--C
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15962088 2 +  43084221 A--T
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         71574 2 +    196370 g--c
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          15754 2 +     40510 g--c
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15139469 2 -  15256731 G--C
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      34550 2 -     53260 G--C
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101145110 2 + 101219884 G--C
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                16811 2 -     21363 A--T
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           762114 2 +    964067 a--t
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10886879 2 +  10971483 A--C
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147665044 2 + 156195979 A--C
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            17029 2 +     23629 A--C
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 278881 2 -    399297 A--T
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53029559 2 +  72327488 A--T
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  208555 2 -    956709 A--T
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 31002 4 -     67205 ATAT
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                18124 2 +     26546 A--T
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             59212 2 -    236241 A--T
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          183988 2 -   6883506 a--t
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16845254 2 +  31942871 A--T
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18699349 2 -  18957592 A--G
i Desmodus_rotundus.KZ672188.1                          I 41 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   157352 2 +    228994 A--T
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3656661 2 +   4240102 A--T
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 28304 2 +     28912 A--T
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                36438 2 -     73477 A--T
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22998926 2 -  44670279 a--t
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 12604 2 +     24177 G--T
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4704511 2 +   6522550 A--T
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Erythrocebus_patas.Contig8                             48774237 2 -  48907691 G--C
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eulemur_albifrons.k141_715837                              5453 2 +     13586 A--T
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               5384 2 -      6809 A--T
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            11861 2 +     36558 A--T
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             8182 2 +     60246 A--T
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                11658 2 +    109717 A--T
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               16044 2 +     16540 A--T
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                16319 2 +     27497 A--T
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           18776 2 +     26808 A--T
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                33514 2 +     46535 A--T
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              16238 2 -     29447 A--T
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Galago_moholi.ctg555                                     211280 2 -    847004 A--T
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           13654 2 -     43889 A--T
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          10728 2 +     27357 A--T
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               156643 2 +    324696 A--T
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           13423 2 -     18683 A--A
i Glis_glis.GliGli_scaffold_79770                       C 0 I 10
s Gorilla_beringei.k141_111300                               5711 2 -     14630 G--C
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119652811 2 - 195582420 G--C
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         2230 2 +     10286 A--T
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                              707 2 -     11661 A--T
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             6036 2 +     56096 A--T
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        29287 2 -     42470 A--T
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        45910 2 -     54384 A--T
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2551443 2 +  31725842 A--T
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               61266 2 +     73687 A--A
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      278740 2 -    477199 a--t
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              7886 2 -      9143 A--T
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      5121 2 -   7690867 G--C
i Hoolock_leuconedys.ctg79                                 C 0 I 307
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19347 2 -    119109 A--T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_164775                               202 2 -      2073 G--C
i Hylobates_abbotti.k141_164775                         C 0 C 0
s Hylobates_agilis.k141_1878600                               439 2 -      1230 G--C
i Hylobates_agilis.k141_1878600                         C 0 I 30
s Hylobates_pileatus_b.ContigUN                                 14625092 2 -  25970782 G--C
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            2348 2 -      2977 G--C
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             34251 2 -     60944 G--C
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     6513 2 +     22540 A--T
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7126196 2 +  13083262 A--T
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_5141390                                    750 2 -      3181 A--T
i Indri_indri.k141_5141390                              C 0 C 0
s Jaculus_jaculus.JH725517.1                              8566240 2 +  11848649 A--T
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Lagothrix_lagothricha.k141_12968                          50605 2 -    147782 G--C
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_5102                   115635 2 -    115756 a--t
i Lasiurus_borealis.LasBor_scaffold_5102                I 887 n 2
s Lemur_catta.scaffold_1                                258407591 2 - 285822530 A--T
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        24335 2 +     39228 A--T
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            53719 2 +     63517 A--T
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        78983 2 +    116806 A--T
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     31974 2 -     33031 A--T
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    13611 2 +     22452 A--T
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lophocebus_aterrimus.ctg55                             19248748 2 +  19376315 G--C
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           11029 2 +     84689 A--T
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3778778 2 +   6799190 A--T
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20594643 2 -  62548349 A--T
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Macaca_arctoides.k141_2201161                             20483 2 +     74745 G--C
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12706940 2 +  12821369 G--C
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                2582 2 -      3136 G--C
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           47400 2 +     63263 G--C
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                 2105 2 -      2568 G--T
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 2690 2 -      7381 G--C
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  45907 2 -     79256 G--C
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196036014 2 + 196197964 G--C
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11446184 2 +  11645122 G--C
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   4854 2 -     46448 G--C
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                2528 2 -     13212 G--C
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 16207 2 -     55006 G--C
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43841323 2 +  43892939 G--C
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               17493 2 -     24607 G--C
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               4859 2 -     27140 G--C
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43437908 2 -  43563597 G--C
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4450728 2 -   4543643 G--C
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36874020 2 +  64221397 A--A
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               13038 2 +     15977 G--T
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1047250 2 -  26018355 A--T
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Microcebus_murinus.CM007691.1                          16510609 2 +  47401472 A--T
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  34933 2 -     48017 A--T
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               23261 2 -     32043 A--G
i Micronycteris_hirsuta.MicHir_scaffold_37978           I 46 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8210253 2 +  10048721 a--t
i Miniopterus_natalensis.LDJU01000022.1                 C 0 I 164
s Miniopterus_schreibersii.MinSch_scaffold_24116            34906 2 +     45743 a--t
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         2457 2 +     29742 G--C
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirza_zaza.k141_226143                                     5997 2 +      8497 A--T
i Mirza_zaza.k141_226143                                C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                161781 2 +    265003 a--g
i Mormoops_blainvillei.MorMeg_scaffold_2952             I 52 C 0
s Murina_feae.MurFea_scaffold_2254                          19881 2 -    100666 A--T
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70766880 2 +  92629107 G--T
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75489940 2 +  98207768 G--T
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67556178 2 +  89017189 G--T
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74331115 2 +  97876770 G--T
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             12177 2 +     98495 A--A
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 I 11
s Myocastor_coypus.MyoCoy_scaffold_3653                     90293 4 -    117718 ATAT
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               968192 2 +   8389877 A--T
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5019865 2 +   6462685 A--T
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3465774 2 -   3747815 A--T
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        10984 2 +     66751 A--T
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             5378 2 -      8794 A--T
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            119027 2 +    362372 G--T
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               8964 2 +     48152 A--C
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Nomascus_annamensis.k141_720788                             346 2 -      1065 G--C
i Nomascus_annamensis.k141_720788                       C 0 C 0
s Nomascus_concolor.k141_226614                              1650 2 -      5092 G--C
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_39679                              621 2 -     17937 G--C
i Nomascus_gabriellae.k141_39679                        C 0 n 0
s Nomascus_siki_b.tarseq_80                             25368 2 -  18771707 G--C
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  3071 2 +      4512 G--C
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nycticebus_bengalensis.LG16                            65567473 2 -  95554990 A--T
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            4199 2 +      6470 A--T
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65669808 2 +  89412551 A--T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4996360 2 -  23139505 A--T
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3685833 4 +  10294119 ATAT
i Octodon_degus.JH651621.1                              C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  37437 2 +     62360 G--T
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              57937 2 -     66828 A--T
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141876645 2 + 163896628 A--T
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        1098 2 -     53940 A--T
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18009078 2 -  38779656 A--T
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Pan_paniscus.CM003386.1                               127575077 2 - 205426864 G--C
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120152231 2 - 196562556 G--C
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Papio_anubis.CM001492.2                               188156695 2 - 188283584 G--C
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             5012 2 +      5367 G--C
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47514080 2 +  47705337 G--C
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 68056 2 -    104429 G--C
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    6592 2 +     14967 G--C
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 2451 2 -      7628 G--C
i Papio_ursinus.k141_1345919                            C 0 C 0
s Perodicticus_ibeanus.k141_117958                           5787 2 -     23713 T--T
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            25100 2 -     27972 T--T
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      44942 2 -     45160 A--T
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4950685 2 -   8017169 G--T
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    13259 2 -     36578 A--T
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Piliocolobus_badius.k141_1987485                           2478 2 -      5908 A--C
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       3102 2 -     17985 A--C
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            2469 2 +      7694 A--C
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26740947 2 +  26888534 A--C
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            97809 2 +    112873 A--T
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             44211 2 -     61926 a--c
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        25596 2 +     78826 A--C
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              9643 2 -     15800 A--C
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        12842 2 -     16101 A--C
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          6070 2 +      9673 A--C
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13475070 2 -  19735023 a--c
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           13973 2 -     31692 A--C
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       23313 2 +     44506 A--C
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        23525 2 +     67491 A--C
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      13765 2 -     98129 A--C
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     23365 2 +    147771 A--C
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        23622 2 -     23762 A--C
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          4084 2 -     55515 A--C
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         23438 2 +    152463 A--C
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       1155 2 -    119457 A--C
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         13161 2 +    134592 A--C
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          23748 2 -     75465 A--C
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              187597 2 -    373494 G--C
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19808245 2 +  19899266 G--C
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               6208 2 -     15069 A--C
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              6338 2 +     14865 A--C
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                2376 1 -      9567 A---
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6848968 2 +  12164890 A--T
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     17275 2 -     30946 a--t
i Propithecus_coquerelli.NW_012147863.1                 C 0 T 637
s Propithecus_coronatus.k141_1353159                         4032 2 +     11805 A--T
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           43375 2 +     52369 A--T
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         35762 2 -     44753 A--T
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            17686 2 +     27322 A--T
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       17322 2 -     53241 A--T
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         39586 2 -     48185 A--T
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           34587 2 +     77221 G--T
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            4419 2 -     27784 A--G
i Pteronotus_parnellii.KE867983.1                       I 43 C 0
s Pteropus_alecto.KB031157.1                             13246337 2 -  17261082 G--T
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             604288 2 -   3946241 G--T
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             30329 2 +     56732 A--C
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6806817 2 +   6970761 A--C
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             6208 2 +     18040 A--C
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1788164 2 +   2252614 A--C
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                             618 2 -     17045 A--C
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206378095 2 - 206558726 A--C
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44857009 2 -  45163003 A--C
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                19671 2 +    109198 G--T
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15673175 2 -  43202129 A--C
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        5088 2 +     34089 A--C
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              5030 2 -     60842 A--C
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              5123 2 +     67014 A--C
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              5101 2 +     60816 A--C
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 5038 2 -     76454 A--C
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17341763 2 -  30362882 G--C
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         21124 2 -     62485 G--C
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Semnopithecus_entellus.k141_1572367                        3821 2 +     15331 A--C
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       9214 2 +     20762 A--C
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         119217 2 +    130994 A--C
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           38003 2 +     46263 A--C
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     31123 2 +     42640 A--C
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        14163 2 +     30600 A--C
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  100628 2 -    120886 G--T
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            19235 2 +    739146 A--A
i Solenodon_paradoxus.SolPar_flattened_line_1012        I 3 C 0
s Spermophilus_dauricus.KZ294190.1                        2240112 2 +   2842873 A--T
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        15353 2 -  13920577 G--C
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                 599 2 +     20549 A--T
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               15043 2 +     45698 A--T
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194008217 2 - 194193292 G--C
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             39059 2 -     47444 A--T
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  5862 2 +      6782 A--T
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  136418 2 -    259118 A--G
i Tonatia_saurophila.TonSau_scaffold_3334               I 45 C 0
s Trachypithecus_auratus.k141_738098                        27319 2 +     38948 A--C
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   21051 2 -     32910 A--C
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      2437 2 -     12939 A--C
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       2373 2 -     14244 A--C
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           43772 2 -     54611 A--C
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        1575 2 -     11566 A--C
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     3752 2 -     15592 A--C
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          2408 2 +     14371 A--C
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                    689 2 +     12481 A--C
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                         565 2 -     24393 A--C
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       5811 2 -     28054 A--C
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44660611 2 -  44834318 A--C
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       2919 2 +     13828 A--C
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Trichechus_manatus.JH594618.1                          16085318 2 +  31416278 A--T
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2793260 2 -   3938065 A--T
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    5460 2 +     13056 A--T
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Varecia_rubra.k141_432109                                  5665 2 -     20643 A--T
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             25206 2 -     33872 A--T
i Varecia_variegata.k141_775891                         C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       127227 2 -    134049 A--T
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     15555 2 -     20485 A--T
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                701732 90 +    802869 I
e Sorex_araneus.JH798170.1                               17766413 24 -  27805282 I
e Erinaceus_europaeus.JH835290.1                         11534609 4 +  16010500 I
e Suricata_suricatta.SurSur_flattened_line_20339            27933 0 +     62062 C
e Ziphius_cavirostris.ZipCav_flattened_line_127025           7272 0 -      8775 C
e Zalophus_californianus.ZalCal_flattened_line_4097        214639 0 -    227762 C
e Vulpes_lagopus.VulLag_flattened_line_2045                138656 0 -    281493 C
e Vicugna_pacos.KN269600.1                                1525021 0 -   2331223 C
e Ursus_maritimus.KK498671.1                              6515166 0 +  28682327 C
e Uropsilus_gracilis.UroGra_scaffold_69449                   1670 1 +     10241 I
e Tursiops_truncatus.MRVK01000923.1                      69313773 0 -  96451834 C
e Tragulus_javanicus.TraJav_scaffold_14717                   5524 0 +     90398 C
e Tapirus_terrestris.TapTer_scaffold_14939                  58180 0 +     99546 C
e Tapirus_indicus.TapInd_scaffold_176                      807469 0 +   1148477 C
e Sus_scrofa.CM000824.4                                 189272211 1 + 218635234 I
e Spilogale_gracilis.SpiGra_flattened_line_905             235156 0 -    276980 C
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   32625 1 -    114521 I
e Saiga_tatarica.SaiTat_scaffold_82192                       8299 0 +     12214 C
e Rangifer_tarandus.RanTarSib_scaffold_24239                16150 0 +     68503 C
e Puma_concolor.QAVW01000427.1                          131534675 0 - 161321710 C
e Pteronura_brasiliensis.PteBra_flattened_line_1343        247037 0 -    344369 C
e Platanista_gangetica.PlaMin_flattened_line_72990           5748 0 +     21690 C
e Phocoena_phocoena.PhoPho_flattened_line_11948            121662 0 -    122454 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    116150 0 -    135482 C
e Pantholops_hodgsonii.KE114631.1                         1066473 0 -   1292953 C
e Panthera_tigris.KE721879.1                              5028097 0 -   6340057 C
e Panthera_pardus.KV860323.1                              3638422 0 +  18214204 C
e Panthera_onca.PanOnc_flattened_line_1615                  34688 0 +    295523 C
e Ovis_canadensis.OviCan_scaffold_6251                      78838 0 +    140051 C
e Ovis_aries.CM001582.2                                 134077623 0 - 275406953 C
e Otocyon_megalotis.JAEUCK010005121.1                      308560 0 -    505867 C
e Orcinus_orca.KB316965.1                                 7225057 0 -   7562323 C
e Okapia_johnstoni.LVCL01S0017931.1                         37345 0 +     78940 C
e Odocoileus_virginianus.KZ101650.1                       1080053 0 +   1425656 C
e Odobenus_rosmarus.KB229369.1                             679912 0 -   3126709 C
e Nyctereutes_procyonoides.CAJHUB010000786.1                31276 0 +   3668941 C
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Neophocaena_asiaeorientalis.KZ688543.1                  3951372 0 -   4490290 C
e Neomonachus_schauinslandi.NINY01007774.1                4485245 0 -  14209539 C
e Mustela_putorius.JH417978.1                             4424727 0 -  28371801 C
e Mungos_mungo.MunMun_flattened_line_8729                  145273 0 -    168139 C
e Moschus_moschiferus.MosMos_scaffold_78805                  1847 0 -     19904 C
e Monodon_monoceros.MonMon_M_scaffold_5598                 146760 0 +    154973 C
e Mirounga_angustirostris.MirAng_flattened_line_8852        11855 0 -    104932 C
e Mesoplodon_bidens.MesBid_scaffold_227248                    663 0 -      1377 C
e Mellivora_capensis.MelCap_flattened_line_15433             1358 0 -     87323 C
e Megaderma_lyra.MegLyr_scaffold_3562                       64783 239 -    234502 I
e Manis_pentadactyla.KN017078.1                             36556 0 +     58827 C
e Manis_javanica.JSZB01003966.1                            146413 0 +    252755 C
e Lycaon_pictus.CM007556.1                               11088476 0 +  39895028 C
e Lipotes_vexillifer.KE558548.1                            136331 0 +   3060487 C
e Leptonychotes_weddellii.KB714749.1                      3086339 0 -   3498232 C
e Kogia_breviceps.KogBre_flattened_line_35920               23987 0 +     37189 C
e Inia_geoffrensis.IniGeo_flattened_line_66725               9375 0 +     17520 C
e Hyaena_hyaena.HyaHya_flattened_line_20729                 17647 0 -     67322 C
e Hippopotamus_amphibius.HipAmp_scaffold_1308              147472 0 +    277961 C
e Hemitragus_hylocrius.HemHyl_scaffold_16669                27832 0 -     91191 C
e Helogale_parvula.HelPar_flattened_line_22962              17578 0 +     53719 C
e Giraffa_tippelskirchi.LVKQ01S012154.1                    181617 0 -    189561 C
e Felis_nigripes.FelNig_flattened_line_8080                 21523 0 +     52776 C
e Felis_catus_fca126.CM031420.1                         129280383 0 - 158578461 C
e Eubalaena_japonica.EubJap_flattened_line_7756             61839 0 +     89355 C
e Eschrichtius_robustus.EscRob_flattened_line_685          315388 0 +    330699 C
e Equus_przewalskii.ATBW01073585.1                          13322 0 +     92910 C
e Equus_caballus.CM000402.2                              13351833 0 +  41866177 C
e Equus_asinus.JREZ01000062.1                             5853328 0 -   7175178 C
e Enhydra_lutris.KZ291749.1                              85872546 0 +  99434291 C
e Elephantulus_edwardii.JH947210.1                        7816099 793 +  15467074 I
e Elaphurus_davidianus.JRFZ01086400.1                     1491823 0 +   1727528 C
e Diceros_bicornis.DicBicMic_scaffold_9545                   3535 0 +    151128 C
e Dicerorhinus_sumatrensis.PEKH010003161.1                 322880 0 +    993696 C
e Delphinapterus_leucas.KZ290064.1                       80037170 0 -  96802777 C
e Cryptoprocta_ferox.CryFer_flattened_line_19014            52372 0 -     70449 C
e Crocidura_indochinensis.CroInd_scaffold_848148              199 0 +      1327 C
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1008 325 -      5782 I
e Condylura_cristata.JH655880.1                          60613938 1 +  78930452 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_160623         3988 0 -      9338 C
e Catagonus_wagneri.CatWag_scaffold_1305                   159240 1 -    276539 I
e Capra_hircus.CM004562.1                               135706776 0 - 157403528 C
e Capra_aegagrus.CM003214.1                              21325548 0 + 157394656 C
e Canis_lupus_orion.HG994411.1                           16456035 0 -  44759192 C
e Canis_lupus_familiaris.chr31                           11089020 0 +  39895921 C
e Canis_lupus_dingo.QKWQ01001993.1                       11266486 0 -  35597290 C
e Canis_lupus_VD.CanFam_VD_scaffold_16982                   14844 0 +     87036 C
e CanFam4.chr31                                          11519819 0 +  39901454 C
e Camelus_ferus.KB016973.1                                2973353 0 +   6889770 C
e Camelus_dromedarius.KN271192.1                           397617 0 -  15254737 C
e Camelus_bactrianus.KN276303.1                           3219916 0 -   8989139 C
e Bubalus_bubalis.KI419065.1                              1233126 0 -   1914593 C
e Bos_taurus.CM000177.6                                 136296047 0 - 158972876 C
e Bos_mutus.JH883513.1                                     572855 0 -    998990 C
e Bos_indicus.CM003021.1                                138140314 0 - 161108492 C
e Bison_bison.KN264915.1                                  6560205 0 +   6870073 C
e Beatragus_hunteri.BeaHun_scaffold_21644                   43542 0 -     72089 C
e Balaenoptera_bonaerensis.DF502048.1                        5718 0 -     13118 C
e Balaenoptera_acutorostrata.KI537095.1                  26380546 0 +  51448160 C
e Antilocapra_americana.AntAmePen_scaffold_42841            31053 0 +     33004 C
e Ammotragus_lervia.NIVO01013474.1                        3520472 0 +   4113121 C
e Ailurus_fulgens.LNAC01000003.1                          7095021 0 -  16596857 C
e Ailuropoda_melanoleuca.LNAT01000321.1                  10657673 0 +  23371972 C
e Acinonyx_jubatus.LLWD01000356.1                         2034336 0 +   3721120 C
e Hylobates_klossii.k141_285563                               343 193 +      1026 I
e Microtus_ochrogaster.CM001673.1                        22820341 4 -  98408828 I
e Tarsius_wallacei.k141_48636                               60206 0 +     65473 C
e Tarsius_lariang.k141_609102                               26890 0 +     42269 C
e Rattus_norvegicus.chr11                                13915860 1475 +  90463843 I
e Ondatra_zibethicus.OndZib_scaffold_6821                  125594 4 +    145789 I
e Graphiurus_murinus.GraMur_scaffold_4493                   77863 0 +    118900 C
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I
e Ellobius_talpinus.LOJH01090055.1                           7151 4 -      7838 I
e Ellobius_lutescens.LOEQ01003611.1                        240029 1 -    369425 I
e Cephalopachus_bancanus.k141_702587                         8444 0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          309416 0 +    345090 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               12200 30 +    209709 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---AG--TA-AT
s Acinonyx_jubatus.LLWD01000356.1                         2034336 29 +   3721120 -AA-AT-TCAA------AG----TT--TCC-ATTTG----TAT---AC--TA-AT
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    112909 27 -    189883 ACA-GC-TTAA------TT----TC--TAA-TG-TA----ATG---A----A-AA
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10657673 29 +  23371972 -aa-at-tcaa------at----tt--tcc-atttg----tca---ac--tc-at
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7095021 29 -  16596857 -aa-gt-tcaa------at----tt--tcc-atttg----tca---ac--ta-at
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   17230 29 -     22067 AAA-GT-TCAC------AG----TC--TCC-ATTTA----TTG---GC--C--AT
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   1710 30 -     60446 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         2430 30 -     29318 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         1365 30 +     38766 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          2324 30 -     80423 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            10627 30 -     18050 AAA-GT-TCAG------AC----TT--TCC-ATTTG----TTG---AC--CA-AT
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_1710068                                342 30 +      1555 AAA-GT-TCAG------AC----TT--TCC-ATTTG----TCG---AC--CA-AT
i Alouatta_caraya.k141_1710068                          C 0 C 0
s Alouatta_discolor.k141_811576                             11300 30 -     21359 AAA-GT-TCAG------AC----TT--TCC-ATTTG----TTG---AC--CA-AT
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                 921 30 +      2129 AAA-GT-TCAG------AC----TT--TCC-ATTTG----TCG---AC--CA-AT
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_2177643                           305 30 -      1868 AAA-GT-TCAG------AC----TT--TCC-ATTTG----TCG---AC--CA-AT
i Alouatta_macconnelli.k141_2177643                     C 0 C 0
s Alouatta_nigerrima.k141_3537692                             354 30 +      1660 AAA-GT-TCAG------AC----TT--TCC-ATTTG----TCG---AC--CA-AT
i Alouatta_nigerrima.k141_3537692                       C 0 C 0
s Alouatta_palliata.k141_2764429                              269 30 -      1480 AAA-GT-TCAG------AC----TT--TCC-ATTTG----TTG---AC--CA-AT
i Alouatta_palliata.k141_2764429                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            4347 30 -      4927 AAA-GT-TCAG------AC----TT--TCC-ATTTG----TCG---AC--CA-AT
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_1531728                             484 30 -      1692 AAA-GT-TCAG------AC----TT--TCC-ATTTG----TTG---AC--CA-AT
i Alouatta_seniculus.k141_1531728                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3520472 29 +   4113121 -AT-GT-TCAA------AT----TA--TCC-ATTTG----TTA---AC--ca-at
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      390873 30 -    631301 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TCA---AC--CA-AT
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            31053 29 +     33004 -AT-GT-TCAC------AT----TA--TCC-ATTTG----TTA---AC--CA-AT
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 62979 30 +     78111 AAA-GT-TCAA------AC----TT--TCC-ATTTG----TCG---AC--CA-AC
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            5921 30 +     22701 AAA-GT-TCAA------AC----TT--TCC-ATTTG----TCG---AC--CA-AT
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5749878 30 +   9889416 AAA-GT-TCAA------AC----TT--TCC-ATTTG----TCG---AC--CA-At
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             6467 30 -    104377 AAA-GT-TCAA------AC----TT--TCC-ATTTG----TCG---AC--CA-AT
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               6469 30 +     23246 AAA-GT-TCAA------AC----TT--TCC-ATTTG----TCG---AC--CA-AT
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     4023 30 +      5067 AAT-GC-TCAA------AT----TT--TTC-ATTTG----TTA---AT--CA-AT
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        1388 30 +      9265 AAA-GT-TCAA------AT----TT--TCC-ATGTA----TTA---AT--GA-AC
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 9290 30 -     29036 AAA-GT-TCAA------AT----TT--TCC-ATTTG----CCA---AC--CA-AT
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9539738 30 +  39197703 GAA-GT-TCAA------AC----TT--TCC-ATTTG----TCG---AC--CA-AT
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             61009 30 +     85812 GAA-GT-TCAA------AC----TT--TCC-ATTTG----TCG---AC--CA-AT
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                12022 30 +     89302 GAA-GT-TCAA------AC----TT--TCC-ATTTG----TCG---AC--CA-AT
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             16525 30 -     58268 GAA-GT-TCAA------AC----TT--TCC-ATTTG----TCG---AC--CA-AT
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             64517 30 +    119057 GAA-GT-TCAA------AC----TT--TCC-ATTTG----TCG---AC--CA-AT
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               6488 30 -     25888 GAA-GT-TCAA------AC----TT--TCC-ATTTG----TCG---AC--CA-AT
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 7119 30 -     16375 AAA-GT-TCAA------AT----TT--TCC-ATTTA----TTA---AC--CA-AT
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                                738 30 +      6337 AAA-GT-TCAA------AT----TT--TCC-ATTTA----TTA---AC--CA-AT
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26380546 29 +  51448160 -at-gt-taaa------at----tt--tcc-atttg----tca---ac--ca-at
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        5718 29 -     13118 -at-gt-taaa------at----tt--tcc-atttg----tca---ac--ca-at
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   43542 29 -     72089 -AT-GT-TCAA------AT----TA--TCC-ATTTG----TTA---AC--CA-AT
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6560205 29 +   6870073 -AG-GT-TCAG------AT----TA--TCC-ATTCG----TTA---Ac--ca-at
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138140314 29 - 161108492 -AG-GT-TCAG------AT----TA--TCC-ATTCG----TTA---AC--ca-at
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     572855 29 -    998990 -AG-GT-TCAG------AT----TA--TCC-ATTCA----TTA---Ac--ca-at
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136296047 29 - 158972876 -AG-GT-TCAG------AT----TA--TCC-ATTCG----TTA---Ac--ca-at
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1233126 29 -   1914593 -AT-GT-TCAA------AT----TA--TCC-ATTCG----TTA---AC--ca-at
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               114375 30 -    171031 aaa-gt-tcaa------ac----tt--tcc-atTTG----TCA---AC--CA-AT
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 13404 30 +    125063 aaa-gt-tcaa------ac----tt--tcc-atTTG----TCA---AC--CA-AT
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                15447 30 -    216513 aaa-gt-tcaa------ac----tt--tcc-atTTG----TCA---AC--CA-AT
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        7990 30 -    134917 aaa-gt-tcaa------ac----tt--tcc-atTTG----TCA---AC--CA-AT
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3219916 29 -   8989139 -aa-gt-tcaa------at----tt--TCC-ATTTG----CCA---Ac--ta-at
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           397617 29 -  15254737 -aa-gt-tcaa------at----tt--TCC-ATTTG----CCA---AC--TA-Ac
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2973353 29 +   6889770 -AA-GT-TCAA------AT----TT--TCC-ATTTG----CCA---AC--ta-at
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11519819 29 +  39901454 -AA-GT-TCAA------AT----TT--TCA-ATTTG----TCA---AC--CA-AT
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   14844 29 +     87036 -AA-GT-TCAA------AT----TT--TCA-ATTTG----TCA---AC--CA-AT
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11266486 29 -  35597290 -AA-GT-TCAA------AT----TT--TCA-ATTTG----TCA---AC--ca-at
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11089020 29 +  39895921 -AA-GT-TCAA------AT----TT--TCA-ATTTG----TCA---AC--ca-at
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16456035 29 -  44759192 -AA-GT-TCAA------AT----TT--TCA-ATTTG----TCA---AC--ca-at
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21325548 29 + 157394656 -AT-GT-TCAA------AT----TA--TCC-ATTTG----TTA---Ac--ca-at
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135706776 29 - 157403528 -AT-GT-TCAA------AT----TA--TCC-ATTTG----TTA---AC--ca-at
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          309416  8 +    345090 -----------------------------------------TA---ac--ca-at
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               60073 30 +     67245 AAA-GT-TCAG------AT----TT--TCC-ATTTG----TCA---AC--CA-AT
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   31465 29 +     33760 AAA-AT-TCAA------AT----TT--TCC-AA-TT----TTC---GT--TA-AT
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   159241 25 -    276539 ----GT-TCAA------AC----TT--TCC-ATTTG----TTC---AC--CA---
i Catagonus_wagneri.CatWag_scaffold_1305                I 1 C 0
s Cavia_aperea.AVPZ01000278.1                            15786964 30 -  24422027 GAA-GT-TTAA------AG----TT--TCC-ATCTG----TTA---AC--CA-AT
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15798900 30 -  24440124 GAA-GT-TTAA------AG----TT--TCC-ATCTG----TTA---AC--CA-AT
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       177091 30 +    436027 GAA-GT-TTAA------AG----TT--TCC-ATCTG----TTA---AC--CA-AT
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18891221 30 -  29618158 AAA-GT-TCAA------AC----TT--TCC-GTTTG----TCG---AC--CA-AT
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 8765 30 -     26817 AAA-GT-TCAA------AC----TT--TCC-ATTTG----TCG---AC--CA-AT
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                13008 30 +     25043 AAA-GT-TCAA------AC----TT--TCC-GTTTG----TCG---AC--CA-AT
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         8444  8 +     21754 -----------------------------------------TA---AC--CA-AT
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4364231 28 +   7569818 -aa-gt-tcat------at----tt--tcc-atttg----tca---ac--ca-a-
i Ceratotherium_simum.JH767818.1                        C 0 I 4
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         3988 28 -      9338 -AA-GT-TCAT------AT----TT--TCC-ATTTG----TCA---AC--CA-A-
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 I 4
s Cercocebus_atys.KQ010443.1                              6555656 30 +   6739814 AAA-Gt-tcaa------at----tt--tcc-atttg----ttg---ac--ca-at
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      27133 30 +     60454 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          2339 30 -     21101 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         59648 30 -    107033 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        2538 30 -     17608 AAA-GT-TCAA------AT----TT--TCC-ATTCG----TTG---AC--CA-AT
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          30034 30 +     30494 AAA-GT-TCAA------AT----TT--TCC-ATTCG----TTG---AC--CA-AT
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          58879 30 -     59240 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          2580 30 +     16677 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           24739 30 +     35983 AAA-GT-TCAA------AT----TT--TCC-ATTCG----TTG---AC--CA-AT
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11991265 30 +  12117833 AAA-GT-TCAA------AT----TT--TCC-ATTCG----TTG---AC--CA-AT
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46478025 30 +  46592721 AAA-GT-TCAA------AT----TT--TCC-ATTCG----TTG---AC--CA-AT
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      41575 30 -     45581 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       2581 30 +     35577 AAA-GT-TCAA------AT----TT--TCC-ATTCG----TTG---AC--CA-AT
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        2356 30 -     25661 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        2336 30 -     17744 AAA-GT-TCAA------AT----TT--TCC-ATTCG----TTG---AC--CA-AT
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        21951 30 +     37128 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           3105 30 -      6963 GAA-GT-TCAA------AT----TT--TCC-ATTTG----TCA---AC--TG-AT
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           59399 30 -     68416 AAA-GT-TCAA------AG----TT--TCC-ATTCA----TTA---AC--CA-AT
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            8444 30 +     13308 AAA-GT-TCAA------AG----TT--TCC-ATTCA----TTA---AC--CA-AT
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             6032 30 -     18223 AAA-GT-TCAA------AC----TT--TCC-ATTTG----TCG---AC--CG-AT
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             23050 30 +     25473 AAA-GT-TCAA------AC----TT--TCC-ATTTG----TCG---AC--CA-AT
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           42090 30 +     57117 AAA-GT-TCAA------AC----TT--TCC-ATTTG----TCG---AC--CG-AT
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          46769 30 +     54541 AAA-GT-TCAA------AC----TT--TCC-ATTTG----TCG---AC--CG-AT
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15962090 30 +  43084221 AAA-GT-TTAA------AG----TT--TCC-TTTTG----TTA---AC--CA-AT
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         71576 30 +    196370 aaa-gt-tcaa------ac----tt--tcc-atTTG----TCA---AC--CA-AT
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          15756 30 +     40510 aaa-gt-tcaa------ac----tt--tcc-atTTG----TCA---AC--CA-AT
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15139471 30 -  15256731 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      34552 30 -     53260 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101145112 30 + 101219884 AAA-Gt-tcaa------at----tt--tcc-atttg----ttg---ac--ca-at
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                16813 30 -     21363 ATA-GT-TCAC------AT----TT--TCC-CTTTG----TCA---AC--CA-AT
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           762116 30 +    964067 ata-gt-TCAC------AT----TT--TCC-CTTTG----TCA---AC--CA-AT
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10886881 30 +  10971483 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---ac--ca-at
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147665046 30 + 156195979 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            17031 30 +     23629 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60613939 34 +  78930452 ----gtataaagttcacat----tt--ttc-atttg----tca---ac--ca-at
i Condylura_cristata.JH655880.1                         I 1 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 278883 24 -    399297 ACA-TT-TCAA------TT----TC--TA-----GA----ATA---G---CA-A-
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53029561 31 +  72327488 GTA-GT-TTAA------TG----TC--TACATT-TA----ACAGGAA-TAC----
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            52372 29 -     70449 -AA-GT-TCAA------AG----TT--TCC-ATTTG----TAT---AC--TA-AT
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  208557 27 -    956709 AAA-GG-TTAA-------G----TT--TTC-ATGTG----ATG---AC--TA---
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 I 1
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 31006 30 -     67205 AAA-GT-TCAC------AG----TT--TCA-CTTTG----TTA---AC--CA-AT
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                18126 30 +     26546 AAA-GT-TTAA------AG----TT--TCC-ATTTG----TTA---AC--CA-AG
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             59214 30 -    236241 AAA-GT-TTAA------AG----TT--TCC-ATCTG----TTA---AC--CA-AT
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          183990 30 -   6883506 gaa-at-tcaa------at----tt--ccc-aTTTG----TCA---AC--CA-AT
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16845256 30 +  31942871 AAA-GT-TCAA------AT----TT--TCC-ATTTA----TTA---AC--CA-AT
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80037170 29 -  96802777 -at-gt-taaa------at----tt--tcc-atttg----tca---ac--ca-at
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18699351 30 -  18957592 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TCT---AC--CA-AT
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 322880 29 +    993696 -Aa-gt-tcat------at----tt--tcc-atttg----tca---ac--ca-at
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   3535 28 +    151128 -AA-GT-TCAT------AT----TT--TCC-ATTTG----TCA---AC--CA-A-
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 I 4
s Dinomys_branickii.DinBra_scaffold_1996                   157354 30 +    228994 AAA-GT-TTGA------AG----TT--TCT-ATTTG----TTA---AC--CA-AT
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3656663 30 +   4240102 AAA-GT-TCAA------AA----TT--TCC-ATGTG----TGA---Gc--ta-at
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 28306 30 +     28912 AAA-GT-TCAA------AA----TT--TCC-ATGTG----TGA---GC--TA-AT
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                36440 28 -     73477 GAA-GT-TTAA------AG----T----CC-ATCTG----TTA---AC--CA-AT
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22998928 26 -  44670279 aaa-tt-ttaa------ag----ta--ttc-atTTT----TCA---AC-------
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 12606 30 +     24177 AAA-Ga-tcaa------at----tt--tcc-attta----tca---aa--CA-AT
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1491823 29 +   1727528 -AT-GT-TCAA------AT----TA--TCC-ATTCG----TTA---AC--CA-AT
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Enhydra_lutris.KZ291749.1                              85872546 29 +  99434291 -aa-gt-tcaa------at----tt--tcc-atttg----tca---ac--ta-at
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4704513 30 +   6522550 AGA-GT-TCAA------AT----TT--TCT-ATTAG----TCA---AC--Ca-at
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5853328 29 -   7175178 -AA-GT-TCAA------AC----TT--TCC-ATTTG----TCA---AC--CA-AT
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13351833 29 +  41866177 -AA-GT-TCAA------AC----TT--TCC-ATTTG----TCA---AC--CA-AT
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          13322 29 +     92910 -AA-GT-TCAA------AC----TT--TCC-ATTTG----TCA---AC--CA-AT
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11534613 22 +  16010500 ----------A------GT----TT--CCC-ATTTG----CCA---AA--CA-AT
i Erinaceus_europaeus.JH835290.1                        I 4 C 0
s Erythrocebus_patas.Contig8                             48774239 30 -  48907691 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          315388 27 +    330699 -AT-GT-TAAA------AT----TT--TCC-AT--G----TCA---AC--CA-AT
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             61839 29 +     89355 -AT-GT-TAAA------AT----TT--TCC-ATTTG----TCA---AC--CA-AT
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              5455 30 +     13586 AAA-GT-TCAA------AT----TT--TCC-ATTTA----TTA---AC--CA-AT
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               5386 30 -      6809 AAA-GT-TCAA------AT----TT--TCC-ATTTA----TTA---AC--CA-AT
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            11863 30 +     36558 AAA-GT-TCAA------AT----TT--TCC-ATTTA----TTA---AC--CA-AT
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             8184 30 +     60246 AAA-GT-TCAA------AT----TT--TCC-ATTTA----TTA---AC--CA-AT
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                11660 30 +    109717 AAA-GT-TCAA------AT----TT--TCC-ATTTA----TTA---AC--CA-AT
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               16046 30 +     16540 AAA-GT-TCAA------AT----TT--TCC-ATTTA----TTA---AC--CA-AT
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                16321 30 +     27497 AAA-GT-TCAA------AT----TT--TCC-GTTTA----TTA---AC--CA-AT
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           18778 30 +     26808 AAA-GT-TCAA------AT----TT--TCC-ATTTA----TTA---AC--CA-AT
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                33516 30 +     46535 AAA-GT-TCAA------AT----TT--TCC-ATTTA----TTA---AC--CA-AT
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              16240 30 -     29447 AAA-GT-TCAA------AT----TT--TCC-ATTTA----TTA---AC--CA-AT
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129893291 29 - 159252932 -AA-GT-TCAA------AG----TT--TCC-ATTTA----TAT---AC--TA-AT
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129280383 29 - 158578461 -AA-GT-TCAA------AG----TT--TCC-ATTTA----TAT---AC--TA-AT
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 21523 29 +     52776 -AA-GT-TCAA------AG----TT--TCC-ATTTA----TAT---AC--TA-AT
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Galago_moholi.ctg555                                     211282 30 -    847004 AAA-GT-TAAA------AT----TT--TCC-ATGTA----TTA---AC--TA-AT
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           13656 30 -     43889 AAA-GT-TAAA------AT----TT--TCC-ATGTA----TTA---AC--TA-AT
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          10730 30 +     27357 AAA-GT-TAAA------AT----TT--CCC-ATGTA----TTA---AC--TA-AT
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               156645 30 +    324696 AAA-GT-TTAA------AT----TT--TCC-ATTTG----TTA---AC--CA-GT
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    181617 29 -    189561 -AT-GT-TCAA------AT----TA--TCC-ATTTG----TTa---ac--ca-at
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           13435  9 -     18683 ----------------------------------------TTA---AT--GG-AT
i Glis_glis.GliGli_scaffold_79770                       I 10 C 0
s Gorilla_beringei.k141_111300                               5713 30 -     14630 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119652813 30 - 195582420 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---ac--ca-at
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         2232 30 +     10286 AAA-GT-TCAA------AT----TT--TCC-ATTTA----TTC---AC--CA-AT
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                              709 30 -     11661 AAA-GT-TCAA------AT----TT--TCC-ATTTA----TTC---AC--CA-AT
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             6038 30 +     56096 AAA-GT-TCAA------AT----TT--TCC-ATTTA----TTA---AC--CA-AT
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        29289 30 -     42470 AAA-GT-TCAA------AT----TT--TCC-ATTTA----TTC---AC--CA-AT
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        45912 30 -     54384 AAA-GT-TCAA------AT----TT--TCC-ATTTA----TTC---AC--CA-AT
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              17578 29 +     53719 -AA-AT-TCAA------AG----TT--TCC-ATTTG----GAT---AC--TA-TT
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                27832 29 -     91191 -AT-GT-TCAA------AT----TA--TCC-ATTTG----TTA---AC--CA-AT
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2551445 30 +  31725842 Aaa-gt-ttaa------at----tt--tcc-atttg----tta---AT--CA-AT
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               61268 24 +     73687 GAA-GA-TCAA------AT----TT--TTC-ATTTG----TCT------------
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 I 3
s Hippopotamus_amphibius.HipAmp_scaffold_1308              147472 29 +    277961 -AT-GT-TCGA------AT----TT--TCC-ATTTG----TCA---AC--CA-AC
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      278742 30 -    477199 aaa-gt-tcaa------at----tt--tcc-atttg----tca---ac--ca-at
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              7888 30 -      9143 ACA-GT-TCAA------AT----TT--TCC-ATTTG----TCA---AC--CA-AT
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg649                                   104146 30 +    115816 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Hoolock_leuconedys.ctg649                                I 223 I 817
s Hyaena_hyaena.HyaHya_flattened_line_20729                 17647 29 -     67322 -AA-GT-TCAA------AG----TT--TCC-ATTTG----TAT---AC--TA-AT
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19349 26 -    119109 GAA-GT-TTAA------AG----T---T----TCTG----TTA---AC--CA-AT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_164775                               204 30 -      2073 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TCG---AC--CA-AT
i Hylobates_abbotti.k141_164775                         C 0 C 0
s Hylobates_agilis.k141_1621614                               216 30 -      1673 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TCG---AC--CA-AT
i Hylobates_agilis.k141_1621614                         I 9 I 150
s Hylobates_pileatus_b.ContigUN                                 14625094 30 -  25970782 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TCG---AC--CA-AT
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            2350 30 -      2977 GAA-GT-TCAA------AT----TT--TCC-ATTTG----TCG---AC--CA-AT
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             34253 30 -     60944 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TCG---AC--CA-AT
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     6515 30 +     22540 AGA-GT-TTAA------AT----TT--CAC-ATTTG----TTA---AC--CA-AT
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7126198 24 +  13083262 AAA-Gt-tcaa------at----tt--tcc-attta----tta------------
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 I 2
s Indri_indri.k141_5141390                                    752 30 -      3181 AAA-GT-TCAA------AT----TT--TCC-ATTTA----TTA---AC--CA-AT
i Indri_indri.k141_5141390                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               9375 29 +     17520 -AT-GT-TACA------AT----TT--TCC-ATTTG----TCA---AC--CA-AT
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8566242 31 +  11848649 AAA-GT-TCAA------AG----TCTCTCC-ATTTA----TTA---GC--c--at
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               23987 29 +     37189 -AT-GT-TAAG------AT----TT--TCC-ATTTG----TCA---AC--CA-AT
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          50607 30 -    147782 AAA-GT-TCAA------AC----TT--TTC-ATTTG----TCG---AC--CA-AT
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                     179 30 +     26176 AGACAT-TTTA------AT----TG--ACT-ATTAA----A-A---AT--AT-TT
i Lasiurus_borealis.LasBor_scaffold_59542               I 2 C 0
s Lemur_catta.scaffold_1                                258407593 30 - 285822530 AAA-GT-TCAA------AT----TT--TCC-ACTTA----TTA---AC--CA-AT
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        24337 30 +     39228 AAA-GT-GCAA------AT----TT--TCC-ATTTA----TTA---AC--CA-AT
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            53721 30 +     63517 AAA-GT-ACAA------AT----TT--TCC-ATTTA----TTA---AC--CA-AT
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        78985 30 +    116806 AAA-GT-GCAA------AT----TT--TCC-ATTTA----TTA---AC--CA-AT
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     31976 30 -     33031 AAA-GT-GCAA------AT----TT--TCC-ATTTA----TTA---AC--CA-AT
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3086339 29 -   3498232 -aa-gt-tcaa------at----tt--tcc-atttg----tca---ac--ta-at
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    13613 30 +     22452 ATA-GT-TCAA------AT----TT--TCC-ATTTC----TTA---AC--CA-AC
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            136331 29 +   3060487 -at-gt-taaa------at----tt--tcc-atttg----tca---ac--ca-at
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19248750 30 +  19376315 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           11031 30 +     84689 AAA-GT-TCAA------AT----TT--TTC-ATGTA----TTA---AT--GA-AT
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3778780 30 +   6799190 AAA-GT-TCAA------AT----TT--TTC-ATGTA----TTA---AT--GA-AT
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20594645 30 -  62548349 AAA-GT-TCAA------AT----TT--CTC-ATTTG----CCA---AC--AA-AT
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11088476 29 +  39895028 -AA-GT-TCAA------AT----TT--TCA-ATTTG----TCA---AC--ca-at
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             20485 30 +     74745 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12706942 30 +  12821369 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                2584 30 -      3136 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           47402 30 +     63263 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                 2107 30 -      2568 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 2692 30 -      7381 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  45909 30 -     79256 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196036016 30 + 196197964 AAA-Gt-tcaa------at----tt--tcc-atttg----ttg---ac--ca-at
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11446186 30 +  11645122 AAA-Gt-tcaa------at----tt--tcc-atttg----ttg---ac--ca-at
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   4856 30 -     46448 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                2530 30 -     13212 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 16209 30 -     55006 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43841325 30 +  43892939 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               17495 30 -     24607 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               4861 30 -     27140 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43437910 30 -  43563597 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4450730 30 -   4543643 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            146413 29 +    252755 -AA-GT-TCAA------AT----TT--TCC-ATTTG----TCC---AC--Ca-at
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             36556 29 +     58827 -AA-GT-TCAA------AT----TT--TCC-ATTTG----TCC---AC--Ca-at
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36874022 24 +  64221397 AAA-Gt-tcaa------at----tt--tcc-attta----tta------------
i Marmota_marmota.CZRN01000005.1                        C 0 I 2
s Mellivora_capensis.MelCap_flattened_line_15433             1358 29 -     87323 -AA-GT-TCAA------AT----TT--TCC-ATTTG----TCA---AC--TG-AT
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               13040 27 +     15977 ACA-GT-TCAA------TT----TC--TAA-TT-TA----ATA---A----A-AT
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1047252 26 -  26018355 ACA-GT-TTAA------TG----TC--TATATT-TA----ACA---A---T----
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_227248                    663 23 -      1377 -AT-GT-TAAA------AT----TT--TCC-ATTTG----TCA------------
i Mesoplodon_bidens.MesBid_scaffold_227248              C 0 I 2
s Microcebus_murinus.CM007691.1                          16510611 30 +  47401472 AAA-GT-TCAA------AG----TT--TCC-ATTTA----TTA---ac--ca-at
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  34935 29 -     48017 AAA-TT-TTAA------AT----TA--TTC-ATTT-----TTG---AC--AA-GT
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               23263 30 -     32043 AAA-GC-TCCA------AT----TT--TCC-ATTTG----TCA---AC--CA-AT
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8210419 30 +  10048721 aaA-GT-TCAA------AT----TT--AAC-ATTAG----TCA---AC--CA-AT
i Miniopterus_natalensis.LDJU01000022.1                 I 164 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            34908 30 +     45743 aTA-GT-TCAA------AT----TT--AAC-ATTAG----TCA---AC--CA-AT
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         2459 30 +     29742 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        11855 29 -    104932 -AA-GT-TCAA------AT----TT--TCC-ATTTG----TCA---AC--TA-AT
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     5999 30 +      8497 AAA-GT-TCAA------AA----TT--TCC-ATTTG----CTA---AT--CA-AT
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 146760 29 +    154973 -AT-GT-TAAA------GT----TT--TCC-ATTTG----TCA---AC--CA-AT
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                161783 28 +    265003 aaa-GT-TCAA------AT----TT--TCC-AT--G----TCA---AC--CA-AT
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  1847 29 -     19904 -AT-GT-TCAA------AT----TA--TCC-ATTCA----TTA---AC--CA-AT
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  145273 29 -    168139 -AA-AT-TCAA------AG----TT--TCC-ATTTG----GAT---AC--TA-TT
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          19883 30 -    100666 AGA-GT-TTAA------AT----TT--TCT-ATTAG----TCA---AC--CA-AT
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70766882 27 +  92629107 ACA-GT-TCAA------Tt----tc--taa-tt-ta----ata---a----a-at
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75489942 27 +  98207768 ACA-GT-TCAA------TT----TC--TAA-TT-TA----GTA---A----A-AT
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67556180 27 +  89017189 ACA-GT-TCAA------tt----tc--taa-tt-ta----ata---a----a-at
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74331117 27 +  97876770 ACA-GT-TCAA------Tt----tc--taa-tt-ta----ata---a----a-at
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             12190  9 +     98495 ----------------------------------------TTA---AT--GG-AT
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 11 C 0
s Mustela_putorius.JH417978.1                             4424727 29 -  28371801 -aa-gt-tcaa------at----tt--tcc-atttg----tcA---AC--ta-at
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     90297 30 -    117718 AAC-GT-TCAA------AG----TT--TCC-ATTTG----TTA---AC--CA-GT
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               968194 30 +   8389877 AGA-GT-TCAA------AT----TT--TCT-ATTAG----TCA---AC--Ca-at
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5019867 30 +   6462685 AGA-GT-TCAA------AT----TT--TCT-ATTAG----TCA---ac--ca-aa
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3465776 30 -   3747815 AGA-GT-TCAA------AT----TT--TCT-ATTAG----TCA---AC--Ca-at
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        10986 30 +     66751 AGA-GT-TCAA------AT----TT--TCT-ATTAG----TCA---AC--CA-AT
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             5380 30 -      8794 GCA-GT-TCAA------AT----TT--TCT-ATTTG----TCG---AC--TG-AT
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            119029 30 +    362372 AAA-TT-TCGA------TC----CC--TAC-ATTTA----TTA---AC--CA-GT
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               8966 30 +     48152 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4485245 29 -  14209539 -aa-gt-tcaa------at----tt--tcc-atttg----tca---ac--ta-at
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3951372 29 -   4490290 -at-gt-taaa------at----tt--tcc-atttg----tca---ac--ca-at
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Nomascus_annamensis.k141_720788                             348 30 -      1065 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Nomascus_annamensis.k141_720788                       C 0 C 0
s Nomascus_concolor.k141_226614                              1652 30 -      5092 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_1004198                            219 30 +      1448 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Nomascus_gabriellae.k141_1004198                      I 37 C 0
s Nomascus_siki_b.tarseq_80                             25370 30 -  18771707 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  3073 30 +      4512 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                31276 29 +   3668941 -AA-gt-tcaa------at----tt--tca-atttc----tca---ac--ca-at
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65567475 30 -  95554990 AAA-GT-TCAA------AT----TT--TCC-ATGTA----TTA---AT--GA-AT
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            4201 30 +      6470 AAA-GT-TCAA------AT----TT--TCC-ATGTA----TTA---AT--GA-AT
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65669810 30 +  89412551 AAA-GT-TCAA------AT----TT--TCC-ATGTA----TTA---AT--GA-AT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4996362 30 -  23139505 AAT-GT-TCAA------AT----TT--TCC-ATTTG----ATA---AC--CA-CT
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3685837 30 +  10294119 AAA-CT-TCAA------AG----TT--TCC-ATTTA----TTA---AC--CA-AT
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             679912 29 -   3126709 -aa-gt-tcaa------at----tt--tcc-atttg----tca---ac--ta-at
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1080053 29 +   1425656 -AT-GT-TCAA------AT----TA--TCC-ACTCG----TTA---AC--CA-AT
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         37345 29 +     78940 -AT-GT-TCAA------AT----TA--TCC-ATTTG----TTA---ac--ca-at
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  37439 29 +     62360 ACA-GT-TTAA------TG----TC--CACATT-TA----ACA---G---CA-AA
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7225057 29 -   7562323 -AT-GT-TAAA------AT----CT--TCC-ATTTG----TCA---ac--ca-at
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              57939 30 -     66828 GAA-GT-TTAA------AT----TT--TTC-AATTG----TCA---AC--AA-AT
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141876647 30 + 163896628 ATA-GT-tcag------at----tt--tcc-atttc----tta---ac--ca-ac
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      308560 29 -    505867 -AA-GT-TCAA------AT----TT--TCA-ATTCG----TCA---AC--ca-at
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        1100 30 -     53940 AAA-GT-TAAA------AT----TT--TCC-ATGTA----TTA---AC--TA-AT
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18009080 30 -  38779656 AAA-GT-TAAA------AT----TG--TCC-ATGTA----TTA---AC--TA-TT
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134077623 29 - 275406953 -AT-GT-TCAA------AT----TA--TCC-ATTTG----TTA---AC--ca-at
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      78838 29 +    140051 -AT-GT-TCAA------AT----TA--TCC-ATTTG----TTA---AC--CA-AT
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127575079 30 - 205426864 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---ac--ca-at
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120152233 30 - 196562556 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---ac--ca-at
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  34688 29 +    295523 -AA-GT-TCAA------AG----TT--TCC-ATTTG----TAT---AC--TA-AT
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3638422 29 +  18214204 -AA-GT-TCAA------AG----TT--TCC-ATTTG----TAT---AC--TA-AT
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5028097 29 -   6340057 -AA-GT-TCAA------AG----TT--TCC-ATTTG----TAT---AC--TA-AT
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1066473 29 -   1292953 -AT-GT-TCAA------AT----TA--TCC-ATTTG----TTA---Ac--ca-at
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188156697 30 - 188283584 AAA-Gt-tcaa------at----tt--tcc-atttg----ttg---ac--ca-at
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             5014 30 +      5367 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47514082 30 +  47705337 AAA-GT-TCAG------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 68058 30 -    104429 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    6594 30 +     14967 AAA-GT-TCAG------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 2453 30 -      7628 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    116150 29 -    135482 -AA-GT-TCAA------AC----TT--TCC-ATTTG----TAC---AC--TA-AT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           5789 30 -     23713 AAA-GT-TCAA------AT----TT--TCC-ATGTA----TTA---AT--GA-AT
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            25102 30 -     27972 AAA-GT-TCAA------AT----TT--TCC-ATGTA----TTA---AT--GA-AT
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_22291      44944 28 -     45160 AAA-GT-TCAA------AA----TT--TCC-ATggg----agg---gg--ct---
i Perognathus_longimembris.PerPac_flattened_line_22291  C 0 N 0
s Peromyscus_maniculatus.KI615518.1                       4950687 29 -   8017169 ACA-GT-TAAA------TG----TC--TACATT-TA----ACA---G---CA-AT
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    13261 30 -     36578 AAA-GT-TTAA------AT----TT--TCT-TTTTG----TTG---AT--CA-AT
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            121662 29 -    122454 -AT-GT-TAAA------AT----TT--TCC-ATTTG----TCA---AC--CA-AT
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1987485                           2480 30 -      5908 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       3104 30 -     17985 AAA-TT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            2471 30 +      7694 AAA-TT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26740949 30 +  26888534 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---ac--ca-at
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            97811 30 +    112873 AAA-GT-TCAA------AT----TT--TCT-ATTAG----TCA---AC--CA-AT
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             44213 30 -     61926 aaa-gt-tcaa------ac----tt--tcc-atTTG----TCG---AC--CA-AT
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        25598 30 +     78826 AAA-GT-TCAA------AC----TT--TCC-ATTTG----TCG---AC--CA-AT
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              9645 30 -     15800 AAA-GT-TCAA------AC----TT--TCC-ATTTG----TCG---AC--CA-AT
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        12844 30 -     16101 AAA-GT-TCAA------AC----TT--TCC-ATTTG----TCG---AC--CA-AT
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          6072 30 +      9673 AAA-GT-TCAA------AC----TT--TCC-ATTTG----TCG---AC--CA-AT
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13475072 30 -  19735023 aaa-gt-tcaa------ac----tt--tcc-atTTG----TCG---AC--CA-AT
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           13975 30 -     31692 AAA-GT-TCAA------AC----TT--TCC-ATTTG----TCG---AC--CA-AT
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           5748 29 +     21690 -AT-GT-TAAA------AT----TT--TCC-ATTTG----TCA---AC--CA-AT
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       23315 30 +     44506 AAA-GT-TCAA------AC----TT--TCC-ATTTG----TCG---AC--CA-AT
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        23527 30 +     67491 AAA-GT-TCAA------AC----TT--TCC-ATTTG----TCG---AC--CA-AT
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      13767 30 -     98129 AAA-GT-TCAA------AC----TT--TCC-ATTTG----TCG---AC--CA-AT
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     23367 30 +    147771 AAA-GT-TCAA------AC----TT--TCC-ATTTG----TCG---AC--CA-AT
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        23624 30 -     23762 AAA-GT-TCAA------AC----TT--TCC-ATTTG----TCG---AC--CA-AT
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          4086 30 -     55515 AAA-GT-TCAA------AC----TT--TCC-ATTTG----TCG---AC--CA-AT
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         23440 30 +    152463 AAA-GT-TCAA------AC----TT--TCC-ATTTG----TCG---AC--CA-AT
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       1157 30 -    119457 AAA-GT-TCAA------AC----TT--TCC-ATTTG----TCG---AC--CA-AT
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         13163 30 +    134592 AAA-GT-TCAA------AC----TT--TCC-ATTTG----TCG---AC--CA-AT
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          23750 30 -     75465 AAA-GT-TCAA------AC----TT--TCC-ATTTG----TCG---AC--CA-AT
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              187599 30 -    373494 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---ac--ca-at
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19808247 30 +  19899266 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               6210 30 -     15069 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              6340 30 +     14865 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                2377 22 -      9567 --A-GA-TCAA------AT----TT--TTC-ATTTG----TCT------------
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 I 3
s Prolemur_simus.MPIZ01000048.1                           6848970 30 +  12164890 AAA-Gt-tcaa------at----tt--tcc-attta----tta---ac--cA-AT
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     16640 30 -     30946 AAA-gt-tcaa------at----tt--tcc-attta----tta---ac--cA-NN
i Propithecus_coquerelli.NW_012147863.1                 T 637 I 2473
s Propithecus_coronatus.k141_1353159                         4034 30 +     11805 AAA-GT-TCAA------AT----TT--TCC-ATTTA----TTA---AC--CA-AT
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           43377 30 +     52369 AAA-GT-TCAA------AT----TT--TCC-ATTTA----TTA---AC--CA-AT
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         35764 30 -     44753 AAA-GT-TCAA------AT----TT--TCC-ATTTA----TTA---AC--CA-AT
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            17688 30 +     27322 AAA-GT-TCAA------AT----TT--TCC-ATTTA----TTA---AC--CA-AT
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       17324 30 -     53241 AAA-GT-TCAA------AT----TT--TCC-ATTTA----TTA---AC--CA-AT
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         39588 30 -     48185 AAA-GT-TCAA------AT----TT--TTC-ATTTA----TTA---AC--CA-AT
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           34589 27 +     77221 ACA-GT-TCAA------TT----tc--taa-tt-ta----aga---a----a-at
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            4421 30 -     27784 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TCA---AC--CA-AT
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        247037 29 -    344369 -AA-GT-TCAA------AT----TT--TCC-ATTTG----TCA---AC--TA-AT
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13246339 30 -  17261082 AAA-GT-TCGA------AT----TT--TCC-ATTTA----TCA---AA--CT-AT
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             604290 30 -   3946241 AAA-gt-tcaa------at----tt--tcc-attta----tca---aa--CT-AT
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131534675 29 - 161321710 -AA-AT-TCAA------AG----TT--TCC-ATTTG----TAT---AC--TA-AT
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             30331 30 +     56732 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6806819 30 +   6970761 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             6210 30 +     18040 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                16150 29 +     68503 -AT-GT-TCAA------AT----TA--TCC-ATTCA----TTA---AC--CA-AT
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1788166 30 +   2252614 AAA-GC-TCAA------AT----TT--TCC-ATTTG----TCA---Ac--ca-at
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                             620 30 -     17045 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206378097 30 - 206558726 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---ac--ca-at
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44857011 30 -  45163003 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                19673 30 +    109198 AAA-GT-TCAA------AT----TT--TCC-ATTTA----TCA---AA--CA-AT
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       8299 29 +     12214 -AT-GT-TCAA------AT----TA--TCC-ATTTG----TTA---AC--CA-AC
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15673177 30 -  43202129 AAA-GT-TCAA------AC----TT--TCC-ATTTG----TTG---AC--CA-AT
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        5090 30 +     34089 AAA-GT-TCAA------AC----TT--TCC-ATTTG----TTG---AC--CA-AT
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              5032 30 -     60842 AAA-GT-TCAA------AC----TT--TCC-ATTTG----TTG---AC--CA-AT
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              5125 30 +     67014 AAA-GT-TCAA------AC----TT--TCC-ATTTG----TTG---AC--CA-AT
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              5103 30 +     60816 AAA-GT-TCAA------AC----TT--TCC-ATTTG----TTG---AC--CA-AT
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 5040 30 -     76454 AAA-GT-TCAA------AC----TT--TCC-ATTTG----TTG---AC--CA-AT
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17341765 30 -  30362882 GAA-GT-TCAA------AC----TT--TCC-GTTTG----TCG---AC--CA-AT
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         21126 30 -     62485 GAA-GT-TCAA------AC----TT--TCC-GTGTG----TCG---AC--CA-AT
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   32626 34 -    114521 ----GTATAAAGTTTACAT----TC--TTG-ATTTG----TAC---AC--CA-AT
i Scalopus_aquaticus.ScaAqu_scaffold_9300               I 1 C 0
s Semnopithecus_entellus.k141_1572367                        3823 30 +     15331 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       9216 30 +     20762 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         119219 30 +    130994 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           38005 30 +     46263 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     31125 30 +     42640 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        14165 30 +     30600 AAA-GG-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  100630 29 -    120886 ATA-GC-TTAA------GG----TT--TACATT-TA----ACA---G---CA-AT
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            19237 35 +    739146 TAT-GTATAAA------AATGTATT--TCC-ATCTA----GCA---AC--CA-AT
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17766437 15 -  27805282 ----------a------tc----tt-gttt-attta----t--------------
i Sorex_araneus.JH798170.1                              I 24 I 15
s Spermophilus_dauricus.KZ294190.1                        2240114 24 +   2842873 AAA-Gt-tcaa------at----tt--tcc-attta----tta------------
i Spermophilus_dauricus.KZ294190.1                      C 0 I 2
s Spilogale_gracilis.SpiGra_flattened_line_905             235156 29 -    276980 -AA-GT-TCAC------AT----TT--TCC-ATTTG----TCA---AC--TA-AT
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            27933 29 +     62062 -AA-AT-TCAA------AG----TT--TCC-ATTTG----GAT---AC--TA-TT
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189272212 27 + 218635234 ----GT-TCAA------AC----tt--tcc-attta----tcc---at--t-tat
i Sus_scrofa.CM000824.4                                 I 1 I 249
s Symphalangus_syndactylus.tarseq_24                        15355 30 -  13920577 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                 601 30 +     20549 AGA-GT-TCAA------AT----TT--TCC-ATTAG----TCA---AC--CA-AT
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               15045 30 +     45698 GCA-GT-TCAA------AT----TT--TCT-ATTTG----TCG---AC--TG-AT
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      807469 29 +   1148477 -AA-GT-TCAA------AT----TT--TCC-ATTTG----TCA---AC--CA-AT
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  58180 29 +     99546 -AA-GT-TCAA------AT----TT--TCC-ATTTG----TCA---AC--CA-AT
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               26890  8 +     42269 -----------------------------------------TA---AC--CA-AT
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               60206  8 +     65473 -----------------------------------------TA---AC--CA-AT
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194008219 30 - 194193292 AAA-Gt-tcag------at----tt--tcc-atttg----ttg---ac--ca-at
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             39061 23 -     47444 AAA-GT-TTAA------AT----TT--TCA-TTTTG----TT-------------
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 I 3
s Tolypeutes_matacus.TolMat_scaffold_269431                  5864 30 +      6782 GAA-GT-TCAA------AT----TT--TCT-ATTTA----TCA---AT--TG-AT
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  136420 30 -    259118 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TCA---AC--CA-AT
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        27321 30 +     38948 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   21053 30 -     32910 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      2439 30 -     12939 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       2375 30 -     14244 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           43774 30 -     54611 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        1577 30 -     11566 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     3754 30 -     15592 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          2410 30 +     14371 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                    691 30 +     12481 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                         567 30 -     24393 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       5813 30 -     28054 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44660613 30 -  44834318 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       2921 30 +     13828 AAA-GT-TCAA------AT----TT--TCC-ATTTG----TTG---AC--CA-AT
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   5524 29 +     90398 -GT-GT-TCAA------AT----TA--TGC-ATTTG----TCA---AT--CA-GT
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16085320 30 +  31416278 AAA-GT-TCAA------AT----TT--CTC-ATTTG----TCG---at--aa-at
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2793262 30 -   3938065 AAA-GT-TAAC------AT----TT--TCC-ATTTG----TTA---AC--CA-GT
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    5462 30 +     13056 AAA-GT-TAAC------AT----TT--TCC-ATTTG----TTA---AC--CA-GT
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69313773 29 -  96451834 -at-gt-taaa------at----tt--tcc-atttg----tca---AC--CA-AT
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   1671 28 +     10241 ----GTATAAA------AT----TA--TTC-TTTTG----TCA---GT--TA-AT
i Uropsilus_gracilis.UroGra_scaffold_69449              I 1 C 0
s Ursus_maritimus.KK498671.1                              6515166 29 +  28682327 -Ag-gt-tcaa------at----tt--tcc-atttg----tca---ac--tc-at
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  5667 30 -     20643 AAA-GT-TCAA------CT----TT--TCC-ATTTA----TTA---AC--CA-AT
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             25208 30 -     33872 AAA-GT-TCAA------CT----TT--TCC-ATTTA----TTA---AC--CA-AT
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1525021 29 -   2331223 -AA-GT-TCAA------AT----TT--TCC-ATTTG----CCA---Ac--ta-at
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                138656 29 -    281493 -AA-GT-TCAA------AT----TT--TCA-ATTTG----TCA---AC--CA-AT
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       127229 24 -    134049 AAA-GT-TCAA------GT----TT--TCC-ACTTG----TTA------------
i Xerus_inauris.XerIna_scaffold_7898                    C 0 I 2
s Zalophus_californianus.ZalCal_flattened_line_4097        214639 27 -    227762 -AA-GT-TCAA------AT----TT--TCC-ATTTG----TCA---AC--TA---
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 I 2
s Zapus_hudsonius.ZapHud_scaffold_64392                     15557 26 -     20485 AAA-Gt-ttaa------ag----ta--tcc-attt-----taa---gc--t----
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           7272 29 -      8775 -AT-GT-TAAA------AT----TT--TCC-ATTTG----TCA---AC--CA-AT
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                701732 90 +    802869 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Megaderma_lyra.MegLyr_scaffold_3562                       64783 239 -    234502 I
e Elephantulus_edwardii.JH947210.1                        7816099 793 +  15467074 I
e Crocidura_indochinensis.CroInd_scaffold_848148              199  0 +      1327 C
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1008 325 -      5782 I
e Hylobates_klossii.k141_285563                               343 193 +      1026 I
e Microtus_ochrogaster.CM001673.1                        22820341  4 -  98408828 I
e Rattus_norvegicus.chr11                                13915860 1475 +  90463843 I
e Ondatra_zibethicus.OndZib_scaffold_6821                  125594  4 +    145789 I
e Graphiurus_murinus.GraMur_scaffold_4493                   77863  0 +    118900 C
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I
e Ellobius_talpinus.LOJH01090055.1                           7151  4 -      7838 I
e Ellobius_lutescens.LOEQ01003611.1                        240029  1 -    369425 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               12230 2 +    209709 TC
s Acinonyx_jubatus.LLWD01000356.1                         2034365 1 +   3721120 G-
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    112936 2 -    189883 CT
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10657702 1 +  23371972 c-
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7095050 1 -  16596857 c-
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   17259 2 -     22067 TT
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   1740 2 -     60446 TC
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         2460 2 -     29318 TC
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         1395 2 +     38766 TC
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          2354 2 -     80423 TC
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            10657 2 -     18050 CT
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_1710068                                372 2 +      1555 CT
i Alouatta_caraya.k141_1710068                          C 0 C 0
s Alouatta_discolor.k141_811576                             11330 2 -     21359 CT
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                 951 2 +      2129 CT
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_2177643                           335 2 -      1868 CT
i Alouatta_macconnelli.k141_2177643                     C 0 C 0
s Alouatta_nigerrima.k141_3537692                             384 2 +      1660 CT
i Alouatta_nigerrima.k141_3537692                       C 0 C 0
s Alouatta_palliata.k141_2764429                              299 2 -      1480 CT
i Alouatta_palliata.k141_2764429                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            4377 2 -      4927 CT
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_1531728                             514 2 -      1692 CT
i Alouatta_seniculus.k141_1531728                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3520501 2 +   4113121 at
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      390903 2 -    631301 CT
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            31082 2 +     33004 AT
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 63009 2 +     78111 CC
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            5951 2 +     22701 CC
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5749908 2 +   9889416 cc
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             6497 2 -    104377 CC
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               6499 2 +     23246 CC
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     4053 2 +      5067 AC
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        1418 2 +      9265 TC
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 9320 2 -     29036 TG
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9539768 2 +  39197703 CC
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             61039 2 +     85812 CC
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                12052 2 +     89302 CC
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             16555 2 -     58268 CC
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             64547 2 +    119057 CC
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               6518 2 -     25888 CC
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 7149 1 -     16375 T-
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                                768 1 +      6337 T-
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26380575 2 +  51448160 tt
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        5747 2 -     13118 tt
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   43571 2 -     72089 AT
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6560234 2 +   6870073 at
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138140343 2 - 161108492 at
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     572884 2 -    998990 at
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136296076 2 - 158972876 at
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1233155 2 -   1914593 at
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               114405 2 -    171031 CC
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 13434 2 +    125063 CC
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                15477 2 -    216513 CC
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        8020 2 -    134917 CC
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3219945 2 -   8989139 tt
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           397646 2 -  15254737 tt
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2973382 2 +   6889770 tt
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11519848 1 +  39901454 C-
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   14873 1 +     87036 C-
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11266515 1 -  35597290 c-
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11089049 1 +  39895921 c-
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16456064 1 -  44759192 c-
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21325577 2 + 157394656 at
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135706805 2 - 157403528 at
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          309424 1 +    345090 t-
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               60103 2 +     67245 CT
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   31494 2 +     33760 CC
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15786994 2 -  24422027 GC
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15798930 2 -  24440124 GC
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       177121 2 +    436027 GC
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18891251 2 -  29618158 CC
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 8795 2 -     26817 CC
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                13038 2 +     25043 CC
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         8452 1 +     21754 T-
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6555686 2 +   6739814 tc
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      27163 2 +     60454 TC
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          2369 2 -     21101 TC
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         59678 2 -    107033 TC
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        2568 2 -     17608 TC
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          30064 2 +     30494 TC
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          58909 2 -     59240 TC
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          2610 2 +     16677 TC
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           24769 2 +     35983 TC
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11991295 2 +  12117833 TC
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46478055 2 +  46592721 TC
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      41605 2 -     45581 TC
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       2611 2 +     35577 TC
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        2386 2 -     25661 TC
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        2366 2 -     17744 TC
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        21981 2 +     37128 TC
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           3135 2 -      6963 CC
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           59429 1 -     68416 T-
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            8474 1 +     13308 T-
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             6062 2 -     18223 CC
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             23080 2 +     25473 CC
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           42120 2 +     57117 CC
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          46799 2 +     54541 CC
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15962120 2 +  43084221 GC
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         71606 2 +    196370 CC
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          15786 2 +     40510 CC
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15139501 2 -  15256731 TC
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      34582 2 -     53260 TC
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101145142 2 + 101219884 tc
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                16843 2 -     21363 TC
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           762146 2 +    964067 tc
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10886911 2 +  10971483 tc
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147665076 2 + 156195979 TC
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            17061 2 +     23629 TC
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60613973 2 +  78930452 ct
i Condylura_cristata.JH655880.1                         C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 278907 1 -    399297 -C
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53029592 1 +  72327488 T-
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            52401 1 -     70449 C-
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  208585 2 -    956709 TC
i Ctenodactylus_gundi.CteGun_scaffold_447               I 1 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 31036 2 -     67205 AC
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                18156 2 +     26546 GT
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             59244 2 -    236241 GT
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          184020 2 -   6883506 CC
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16845286 1 +  31942871 T-
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80037199 2 -  96802777 tt
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18699381 2 -  18957592 CT
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 322909 2 +    993696 ct
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   157384 2 +    228994 GC
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3656693 2 +   4240102 ct
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 28336 2 +     28912 CT
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                36468 2 -     73477 GT
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22998954 1 -  44670279 -C
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 12636 2 +     24177 CC
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1491852 2 +   1727528 AT
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Enhydra_lutris.KZ291749.1                              85872575 1 +  99434291 c-
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4704543 2 +   6522550 ct
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5853357 2 -   7175178 Tt
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13351862 2 +  41866177 Tt
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          13351 2 +     92910 Tt
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11534635 2 +  16010500 AA
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48774269 2 -  48907691 TC
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          315415 2 +    330699 TT
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             61868 2 +     89355 TT
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              5485 1 +     13586 T-
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               5416 1 -      6809 T-
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            11893 1 +     36558 T-
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             8214 1 +     60246 T-
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                11690 1 +    109717 T-
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               16076 1 +     16540 T-
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                16351 1 +     27497 T-
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           18808 1 +     26808 T-
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                33546 1 +     46535 T-
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              16270 1 -     29447 T-
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129893320 1 - 159252932 C-
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129280412 1 - 158578461 C-
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 21552 1 +     52776 C-
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Galago_moholi.ctg555                                     211312 2 -    847004 TC
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           13686 2 -     43889 TC
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          10760 2 +     27357 TC
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               156675 2 +    324696 TC
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    181646 2 -    189561 at
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           13444 2 -     18683 CT
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               5743 2 -     14630 TC
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119652843 2 - 195582420 tc
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         2262 1 +     10286 T-
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                              739 1 -     11661 T-
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             6068 1 +     56096 T-
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        29319 1 -     42470 T-
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        45942 1 -     54384 T-
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              17607 1 +     53719 C-
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                27861 2 -     91191 AT
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2551475 2 +  31725842 gg
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               61295 2 +     73687 TC
i Heterohyrax_brucei.HetBruBak_scaffold_25354           I 3 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              147501 2 +    277961 TT
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      278772 2 -    477199 ct
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              7918 2 -      9143 CT
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      5430 2 -   7690867 TC
i Hoolock_leuconedys.ctg79                                 I 307 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 17676 1 -     67322 C-
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19375 2 -    119109 GT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_164775                               234 2 -      2073 TC
i Hylobates_abbotti.k141_164775                         C 0 C 0
s Hylobates_agilis.k141_1878600                               471 2 -      1230 TC
i Hylobates_agilis.k141_1878600                         I 30 C 0
s Hylobates_pileatus_b.ContigUN                                 14625124 2 -  25970782 TC
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            2380 2 -      2977 TC
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             34283 2 -     60944 TC
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     6545 2 +     22540 GC
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7126224 2 +  13083262 ac
i Ictidomys_tridecemlineatus.JH393315.1                 I 2 C 0
s Indri_indri.k141_5141390                                    782 1 -      3181 T-
i Indri_indri.k141_5141390                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               9404 2 +     17520 TT
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8566273 2 +  11848649 ct
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               24016 2 +     37189 TT
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          50637 2 -    147782 CT
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                     209 2 +     26176 CT
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258407623 1 - 285822530 T-
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        24367 1 +     39228 T-
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            53751 1 +     63517 T-
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        79015 1 +    116806 T-
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     32006 1 -     33031 T-
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3086368 1 -   3498232 c-
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    13643 2 +     22452 CC
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            136360 2 +   3060487 tt
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19248780 2 +  19376315 TC
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           11061 2 +     84689 TC
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3778810 2 +   6799190 TC
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20594675 2 -  62548349 tc
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11088505 1 +  39895028 c-
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             20515 2 +     74745 TC
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12706972 2 +  12821369 TC
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                2614 2 -      3136 TC
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           47432 2 +     63263 TC
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                 2137 2 -      2568 TC
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 2722 2 -      7381 TC
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  45939 2 -     79256 TC
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196036046 2 + 196197964 tc
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11446216 2 +  11645122 tc
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   4886 2 -     46448 TC
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                2560 2 -     13212 TC
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 16239 2 -     55006 TC
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43841355 2 +  43892939 TC
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               17525 2 -     24607 TC
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               4891 2 -     27140 TC
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43437940 2 -  43563597 TC
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4450760 2 -   4543643 TC
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            146442 1 +    252755 c-
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             36585 1 +     58827 c-
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36874048 2 +  64221397 ac
i Marmota_marmota.CZRN01000005.1                        I 2 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             1387 1 -     87323 C-
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               13067 2 +     15977 at
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 I 243
s Mesocricetus_auratus.KB708139.1                         1047278 1 -  26018355 t-
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_227248                    688 2 -      1377 TT
i Mesoplodon_bidens.MesBid_scaffold_227248              I 2 C 0
s Microcebus_murinus.CM007691.1                          16510641 1 +  47401472 t-
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  34964 2 -     48017 TC
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               23293 2 -     32043 CT
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8210449 2 +  10048721 ct
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            34938 2 +     45743 CT
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         2489 2 +     29742 TC
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        11884 1 -    104932 C-
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     6029 1 +      8497 T-
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 146789 2 +    154973 TT
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                161811 2 +    265003 CT
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  1876 2 -     19904 AT
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  145302 1 -    168139 C-
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          19913 2 -    100666 CT
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70766909 2 +  92629107 tt
i Mus_caroli.LT608236.1                                 C 0 I 1
s Mus_musculus.chr16                                     75489969 2 +  98207768 TC
i Mus_musculus.chr16                                    C 0 I 1
s Mus_pahari.LT608305.1                                  67556207 2 +  89017189 tc
i Mus_pahari.LT608305.1                                 C 0 I 1
s Mus_spretus.CM004110.1                                 74331144 2 +  97876770 tc
i Mus_spretus.CM004110.1                                C 0 I 1
s Muscardinus_avellanarius.MusAve_scaffold_9643             12199 2 +     98495 CT
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4424756 1 -  28371801 c-
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     90327 2 -    117718 GC
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               968224 2 +   8389877 ct
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5019897 2 +   6462685 ct
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3465806 2 -   3747815 ct
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        11016 2 +     66751 CT
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             5410 2 -      8794 CC
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            119059 2 +    362372 CC
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               8996 2 +     48152 TC
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4485274 1 -  14209539 c-
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3951401 2 -   4490290 tt
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Nomascus_annamensis.k141_720788                             378 2 -      1065 TC
i Nomascus_annamensis.k141_720788                       C 0 C 0
s Nomascus_concolor.k141_226614                              1682 2 -      5092 TC
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_1004198                            249 2 +      1448 TC
i Nomascus_gabriellae.k141_1004198                      C 0 C 0
s Nomascus_siki_b.tarseq_80                             25400 2 -  18771707 TC
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  3103 2 +      4512 TC
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                31305 1 +   3668941 c-
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65567505 2 -  95554990 TC
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            4231 2 +      6470 TC
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65669840 2 +  89412551 TC
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4996392 2 -  23139505 CC
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3685867 2 +  10294119 GC
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             679941 1 -   3126709 c-
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1080082 2 +   1425656 AT
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         37374 2 +     78940 at
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  37468 2 +     62360 CC
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7225086 2 -   7562323 tt
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              57969 2 -     66828 TT
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141876677 2 + 163896628 cc
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      308589 1 -    505867 c-
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        1130 2 -     53940 TC
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18009110 2 -  38779656 TC
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134077652 2 - 275406953 at
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      78867 2 +    140051 AT
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127575109 2 - 205426864 tc
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120152263 2 - 196562556 tc
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  34717 1 +    295523 C-
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3638451 1 +  18214204 C-
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5028126 1 -   6340057 C-
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1066502 2 -   1292953 at
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188156727 2 - 188283584 tc
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             5044 2 +      5367 TC
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47514112 2 +  47705337 TC
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 68088 2 -    104429 TC
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    6624 2 +     14967 TC
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 2483 2 -      7628 TC
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    116179 1 -    135482 T-
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           5819 2 -     23713 TC
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            25132 2 -     27972 TC
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359        212 2 +     49596 CT
i Perognathus_longimembris.PerPac_flattened_line_19359  N 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4950716 2 -   8017169 CC
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    13291 2 -     36578 GA
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            121691 2 -    122454 TT
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1987485                           2510 2 -      5908 TC
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       3134 2 -     17985 TC
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            2501 2 +      7694 TC
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26740979 2 +  26888534 tc
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            97841 2 +    112873 CT
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             44243 2 -     61926 TC
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        25628 2 +     78826 TC
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              9675 2 -     15800 TC
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        12874 2 -     16101 TC
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          6102 2 +      9673 TC
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13475102 2 -  19735023 TC
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           14005 2 -     31692 TC
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           5777 2 +     21690 TT
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       23345 2 +     44506 CC
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        23557 2 +     67491 CC
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      13797 2 -     98129 CC
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     23397 2 +    147771 CC
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        23654 2 -     23762 CC
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          4116 2 -     55515 CC
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         23470 2 +    152463 CC
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       1187 2 -    119457 CC
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         13193 2 +    134592 CC
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          23780 2 -     75465 CC
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              187629 2 -    373494 tc
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19808277 2 +  19899266 TC
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               6240 2 -     15069 TC
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              6370 2 +     14865 TC
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                2402 2 -      9567 TC
i Procavia_capensis.ProCapCap_scaffold_149274           I 3 C 0
s Prolemur_simus.MPIZ01000048.1                           6849000 1 +  12164890 T-
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     19143 1 -     30946 n-
i Propithecus_coquerelli.NW_012147863.1                 I 2473 C 0
s Propithecus_coronatus.k141_1353159                         4064 1 +     11805 T-
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           43407 1 +     52369 T-
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         35794 1 -     44753 T-
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            17718 1 +     27322 T-
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       17354 1 -     53241 T-
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         39618 1 -     48185 T-
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           34616 2 +     77221 at
i Psammomys_obesus.NESX01026517.1                       C 0 I 267
s Pteronotus_parnellii.KE867983.1                            4451 2 -     27784 CT
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        247066 1 -    344369 C-
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13246369 2 -  17261082 CC
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             604320 2 -   3946241 CC
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131534704 1 - 161321710 C-
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             30361 2 +     56732 TC
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6806849 2 +   6970761 TC
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             6240 2 +     18040 TC
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                16179 2 +     68503 AT
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1788196 2 +   2252614 gt
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                             650 2 -     17045 TC
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206378127 2 - 206558726 tc
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44857041 2 -  45163003 TC
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                19703 1 +    109198 -C
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       8328 2 +     12214 AT
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15673207 2 -  43202129 CC
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        5120 2 +     34089 CC
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              5062 2 -     60842 CC
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              5155 2 +     67014 CC
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              5133 2 +     60816 CC
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 5070 2 -     76454 CC
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17341795 2 -  30362882 CC
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         21156 2 -     62485 CC
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   32660 2 -    114521 CT
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        3853 2 +     15331 TC
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       9246 2 +     20762 TC
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         119249 2 +    130994 TC
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           38035 2 +     46263 TC
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     31155 2 +     42640 TC
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        14195 2 +     30600 TC
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  100659 1 -    120886 C-
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            19272 2 +    739146 GT
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2240140 2 +   2842873 ac
i Spermophilus_dauricus.KZ294190.1                      I 2 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             235185 1 -    276980 C-
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            27962 1 +     62062 C-
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189272488 2 + 218635234 cc
i Sus_scrofa.CM000824.4                                 I 249 C 0
s Symphalangus_syndactylus.tarseq_24                        15385 2 -  13920577 TC
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                 631 2 +     20549 CT
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               15075 2 +     45698 CC
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      807498 2 +   1148477 CT
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  58209 2 +     99546 CT
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               26898 1 +     42269 T-
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               60214 1 +     65473 T-
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194008249 2 - 194193292 tc
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             39087 2 -     47444 GA
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         I 3 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  5894 2 +      6782 TC
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  136450 2 -    259118 CT
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        27351 2 +     38948 TC
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   21083 2 -     32910 TC
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      2469 2 -     12939 TC
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       2405 2 -     14244 TC
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           43804 2 -     54611 TC
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        1607 2 -     11566 TC
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     3784 2 -     15592 TC
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          2440 2 +     14371 TC
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                    721 2 +     12481 TC
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                         597 2 -     24393 TC
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       5843 2 -     28054 TC
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44660643 2 -  44834318 TC
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       2951 2 +     13828 TC
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   5553 2 +     90398 AT
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16085350 2 +  31416278 tc
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2793292 2 -   3938065 TT
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    5492 2 +     13056 TT
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69313802 2 -  96451834 TT
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   1699 2 +     10241 CT
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6515195 1 +  28682327 c-
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  5697 1 -     20643 T-
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             25238 1 -     33872 T-
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1525050 2 -   2331223 tt
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                138685 1 -    281493 C-
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       127255 2 -    134049 AC
i Xerus_inauris.XerIna_scaffold_7898                    I 2 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        214668 1 -    227762 C-
i Zalophus_californianus.ZalCal_flattened_line_4097     I 2 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           7301 2 -      8775 TT
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                701732 90 +    802869 I
e Sorex_araneus.JH798170.1                               17766452 15 -  27805282 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Megaderma_lyra.MegLyr_scaffold_3562                       64783 239 -    234502 I
e Elephantulus_edwardii.JH947210.1                        7816099 793 +  15467074 I
e Diceros_bicornis.DicBicMic_scaffold_9545                   3563 4 +    151128 I
e Crocidura_indochinensis.CroInd_scaffold_848148              199 0 +      1327 C
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1008 325 -      5782 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_160623         4016 4 -      9338 I
e Catagonus_wagneri.CatWag_scaffold_1305                   159266 0 -    276539 C
e Zapus_hudsonius.ZapHud_scaffold_64392                     15583 0 -     20485 C
e Hylobates_klossii.k141_285563                               343 193 +      1026 I
e Microtus_ochrogaster.CM001673.1                        22820341 4 -  98408828 I
e Rattus_norvegicus.chr11                                13915860 1475 +  90463843 I
e Ondatra_zibethicus.OndZib_scaffold_6821                  125594 4 +    145789 I
e Graphiurus_murinus.GraMur_scaffold_4493                   77863 0 +    118900 C
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I
e Ellobius_talpinus.LOJH01090055.1                           7151 4 -      7838 I
e Ellobius_lutescens.LOEQ01003611.1                        240029 1 -    369425 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               12232 1 +    209709 A
s Acomys_cahirinus.AcoCah_scaffold_1625                    112938 1 -    189883 T
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   17261 1 -     22067 A
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   1742 1 -     60446 A
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         2462 1 -     29318 A
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         1397 1 +     38766 A
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          2356 1 -     80423 A
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            10659 1 -     18050 A
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_1710068                                374 1 +      1555 A
i Alouatta_caraya.k141_1710068                          C 0 C 0
s Alouatta_discolor.k141_811576                             11332 1 -     21359 A
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                 953 1 +      2129 A
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_2177643                           337 1 -      1868 A
i Alouatta_macconnelli.k141_2177643                     C 0 C 0
s Alouatta_nigerrima.k141_3537692                             386 1 +      1660 A
i Alouatta_nigerrima.k141_3537692                       C 0 C 0
s Alouatta_palliata.k141_2764429                              301 1 -      1480 A
i Alouatta_palliata.k141_2764429                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            4379 1 -      4927 A
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_1531728                             516 1 -      1692 A
i Alouatta_seniculus.k141_1531728                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3520503 1 +   4113121 a
i Ammotragus_lervia.NIVO01013474.1                      C 0 I 4
s Anoura_caudifer.AnoCau_scaffold_422                      390905 1 -    631301 A
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            31084 1 +     33004 A
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 I 6
s Aotus_azarae.k141_3170768                                 63011 1 +     78111 A
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            5953 1 +     22701 A
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5749910 1 +   9889416 a
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             6499 1 -    104377 A
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               6501 1 +     23246 A
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     4055 1 +      5067 A
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        1420 1 +      9265 A
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 9322 1 -     29036 A
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9539770 1 +  39197703 A
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             61041 1 +     85812 A
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                12054 1 +     89302 A
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             16557 1 -     58268 A
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             64549 1 +    119057 A
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               6520 1 -     25888 A
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26380577 1 +  51448160 a
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        5749 1 -     13118 a
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   43573 1 -     72089 A
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 I 4
s Bison_bison.KN264915.1                                  6560236 1 +   6870073 a
i Bison_bison.KN264915.1                                C 0 I 4
s Bos_indicus.CM003021.1                                138140345 1 - 161108492 a
i Bos_indicus.CM003021.1                                C 0 I 4
s Bos_mutus.JH883513.1                                     572886 1 -    998990 a
i Bos_mutus.JH883513.1                                  C 0 I 4
s Bos_taurus.CM000177.6                                 136296078 1 - 158972876 a
i Bos_taurus.CM000177.6                                 C 0 I 4
s Bubalus_bubalis.KI419065.1                              1233157 1 -   1914593 a
i Bubalus_bubalis.KI419065.1                            C 0 I 4
s Cacajao_ayresi.k141_724503                               114407 1 -    171031 A
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 13436 1 +    125063 A
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                15479 1 -    216513 A
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        8022 1 -    134917 A
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3219947 1 -   8989139 a
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           397648 1 -  15254737 a
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2973384 1 +   6889770 a
i Camelus_ferus.KB016973.1                              C 0 C 0
s Capra_aegagrus.CM003214.1                              21325579 1 + 157394656 a
i Capra_aegagrus.CM003214.1                             C 0 I 4
s Capra_hircus.CM004562.1                               135706807 1 - 157403528 a
i Capra_hircus.CM004562.1                               C 0 I 4
s Carollia_perspicillata.CarPer_scaffold_4436               60105 1 +     67245 A
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   31496 1 +     33760 A
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15786996 1 -  24422027 A
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15798932 1 -  24440124 A
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       177123 1 +    436027 A
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18891253 1 -  29618158 A
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 8797 1 -     26817 A
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                13040 1 +     25043 A
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cercocebus_atys.KQ010443.1                              6555688 1 +   6739814 a
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      27165 1 +     60454 A
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          2371 1 -     21101 A
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         59680 1 -    107033 A
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        2570 1 -     17608 A
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          30066 1 +     30494 A
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          58911 1 -     59240 A
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          2612 1 +     16677 A
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           24771 1 +     35983 A
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11991297 1 +  12117833 A
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46478057 1 +  46592721 A
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      41607 1 -     45581 A
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       2613 1 +     35577 A
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        2388 1 -     25661 A
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        2368 1 -     17744 A
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        21983 1 +     37128 A
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           3137 1 -      6963 A
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheracebus_lucifer.k141_619653                             6064 1 -     18223 A
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             23082 1 +     25473 A
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           42122 1 +     57117 A
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          46801 1 +     54541 A
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15962122 1 +  43084221 A
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         71608 1 +    196370 A
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          15788 1 +     40510 A
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15139503 1 -  15256731 A
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      34584 1 -     53260 A
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101145144 1 + 101219884 a
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                16845 1 -     21363 A
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           762148 1 +    964067 a
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10886913 1 +  10971483 a
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147665078 1 + 156195979 A
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            17063 1 +     23629 A
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60613975 1 +  78930452 a
i Condylura_cristata.JH655880.1                         C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 278908 1 -    399297 T
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53029593 1 +  72327488 T
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  208587 1 -    956709 A
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 31038 1 -     67205 A
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                18158 1 +     26546 A
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             59246 1 -    236241 A
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          184022 1 -   6883506 A
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80037201 1 -  96802777 a
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18699383 1 -  18957592 A
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 322911 1 +    993696 a
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 I 4
s Dinomys_branickii.DinBra_scaffold_1996                   157386 1 +    228994 A
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3656695 1 +   4240102 a
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 28338 1 +     28912 A
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                36470 1 -     73477 A
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22998955 1 -  44670279 A
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 12638 1 +     24177 A
i Eidolon_helvum.KE772537.1                             C 0 I 4
s Eptesicus_fuscus.JH977687.1                             4704545 1 +   6522550 a
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5853359 1 -   7175178 g
i Equus_asinus.JREZ01000062.1                           C 0 I 4
s Equus_caballus.CM000402.2                              13351864 1 +  41866177 g
i Equus_caballus.CM000402.2                             C 0 I 4
s Equus_przewalskii.ATBW01073585.1                          13353 1 +     92910 g
i Equus_przewalskii.ATBW01073585.1                      C 0 I 4
s Erinaceus_europaeus.JH835290.1                         11534637 1 +  16010500 A
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48774271 1 -  48907691 A
i Erythrocebus_patas.Contig8                            C 0 I 5
s Eschrichtius_robustus.EscRob_flattened_line_685          315417 1 +    330699 A
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             61870 1 +     89355 A
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Galago_moholi.ctg555                                     211314 1 -    847004 A
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           13688 1 -     43889 A
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          10762 1 +     27357 A
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               156677 1 +    324696 A
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    181648 1 -    189561 a
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 I 4
s Glis_glis.GliGli_scaffold_79770                           13446 1 -     18683 A
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               5745 1 -     14630 A
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119652845 1 - 195582420 a
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                27863 1 -     91191 A
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 I 4
s Heterocephalus_glaber.JH602058.1                        2551477 1 +  31725842 a
i Heterocephalus_glaber.JH602058.1                      C 0 I 5
s Heterohyrax_brucei.HetBruBak_scaffold_25354               61297 1 +     73687 A
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 I 5
s Hippopotamus_amphibius.HipAmp_scaffold_1308              147503 1 +    277961 A
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      278774 1 -    477199 a
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              7920 1 -      9143 A
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      5432 1 -   7690867 A
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19377 1 -    119109 A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_164775                               236 1 -      2073 A
i Hylobates_abbotti.k141_164775                         C 0 C 0
s Hylobates_agilis.k141_1878600                               473 1 -      1230 A
i Hylobates_agilis.k141_1878600                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14625126 1 -  25970782 A
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            2382 1 -      2977 A
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             34285 1 -     60944 A
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     6547 1 +     22540 A
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7126226 1 +  13083262 a
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               9406 1 +     17520 A
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8566275 1 +  11848649 a
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               24018 1 +     37189 A
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          50639 1 -    147782 A
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                     211 1 +     26176 A
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    13645 1 +     22452 A
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            136362 1 +   3060487 a
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19248782 1 +  19376315 A
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           11063 1 +     84689 A
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3778812 1 +   6799190 A
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20594677 1 -  62548349 c
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Macaca_arctoides.k141_2201161                             20517 1 +     74745 A
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12706974 1 +  12821369 A
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                2616 1 -      3136 A
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           47434 1 +     63263 A
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                 2139 1 -      2568 A
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 2724 1 -      7381 A
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  45941 1 -     79256 A
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196036048 1 + 196197964 a
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11446218 1 +  11645122 a
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   4888 1 -     46448 A
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                2562 1 -     13212 A
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 16241 1 -     55006 A
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43841357 1 +  43892939 A
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               17527 1 -     24607 A
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               4893 1 -     27140 A
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43437942 1 -  43563597 A
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4450762 1 -   4543643 A
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36874050 1 +  64221397 a
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               13312 1 +     15977 c
i Meriones_unguiculatus.MerUng_scaffold_52233           I 243 C 0
s Mesocricetus_auratus.KB708139.1                         1047279 1 -  26018355 c
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_227248                    690 1 -      1377 A
i Mesoplodon_bidens.MesBid_scaffold_227248              C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  34966 1 -     48017 A
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               23295 1 -     32043 A
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8210451 1 +  10048721 a
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            34940 1 +     45743 A
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         2491 1 +     29742 A
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 146791 1 +    154973 A
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                161813 1 +    265003 A
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  1878 1 -     19904 A
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 I 5
s Murina_feae.MurFea_scaffold_2254                          19915 1 -    100666 A
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70766912 1 +  92629107 c
i Mus_caroli.LT608236.1                                 I 1 C 0
s Mus_musculus.chr16                                     75489972 1 +  98207768 C
i Mus_musculus.chr16                                    I 1 C 0
s Mus_pahari.LT608305.1                                  67556210 1 +  89017189 C
i Mus_pahari.LT608305.1                                 I 1 C 0
s Mus_spretus.CM004110.1                                 74331147 1 +  97876770 C
i Mus_spretus.CM004110.1                                I 1 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             12201 1 +     98495 C
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     90329 1 -    117718 A
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               968226 1 +   8389877 a
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5019899 1 +   6462685 a
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3465808 1 -   3747815 a
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        11018 1 +     66751 A
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             5412 1 -      8794 A
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            119061 1 +    362372 A
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               8998 1 +     48152 A
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3951403 1 -   4490290 a
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Nomascus_annamensis.k141_720788                             380 1 -      1065 A
i Nomascus_annamensis.k141_720788                       C 0 C 0
s Nomascus_concolor.k141_226614                              1684 1 -      5092 A
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_1004198                            251 1 +      1448 A
i Nomascus_gabriellae.k141_1004198                      C 0 C 0
s Nomascus_siki_b.tarseq_80                             25402 1 -  18771707 A
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  3105 1 +      4512 A
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nycticebus_bengalensis.LG16                            65567507 1 -  95554990 A
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            4233 1 +      6470 A
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65669842 1 +  89412551 A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4996394 1 -  23139505 A
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3685869 1 +  10294119 A
i Octodon_degus.JH651621.1                              C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         37376 1 +     78940 a
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 I 4
s Onychomys_torridus.OnyTor_scaffold_12578                  37470 1 +     62360 T
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7225088 1 -   7562323 a
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              57971 1 -     66828 A
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141876679 1 + 163896628 a
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        1132 1 -     53940 A
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18009112 1 -  38779656 A
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134077654 1 - 275406953 a
i Ovis_aries.CM001582.2                                 C 0 I 4
s Ovis_canadensis.OviCan_scaffold_6251                      78869 1 +    140051 A
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 I 4
s Pan_paniscus.CM003386.1                               127575111 1 - 205426864 a
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120152265 1 - 196562556 a
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1066504 1 -   1292953 a
i Pantholops_hodgsonii.KE114631.1                       C 0 I 4
s Papio_anubis.CM001492.2                               188156729 1 - 188283584 a
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             5046 1 +      5367 A
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47514114 1 +  47705337 A
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 68090 1 -    104429 A
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    6626 1 +     14967 A
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 2485 1 -      7628 A
i Papio_ursinus.k141_1345919                            C 0 C 0
s Perodicticus_ibeanus.k141_117958                           5821 1 -     23713 A
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            25134 1 -     27972 A
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359        214 1 +     49596 A
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4950718 1 -   8017169 T
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    13293 1 -     36578 A
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            121693 1 -    122454 A
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1987485                           2512 1 -      5908 A
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       3136 1 -     17985 A
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            2503 1 +      7694 A
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26740981 1 +  26888534 a
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            97843 1 +    112873 A
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             44245 1 -     61926 A
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        25630 1 +     78826 A
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              9677 1 -     15800 A
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        12876 1 -     16101 A
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          6104 1 +      9673 A
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13475104 1 -  19735023 A
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           14007 1 -     31692 A
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           5779 1 +     21690 A
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       23347 1 +     44506 A
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        23559 1 +     67491 A
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      13799 1 -     98129 A
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     23399 1 +    147771 A
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        23656 1 -     23762 A
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          4118 1 -     55515 A
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         23472 1 +    152463 A
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       1189 1 -    119457 A
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         13195 1 +    134592 A
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          23782 1 -     75465 A
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              187631 1 -    373494 a
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19808279 1 +  19899266 A
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               6242 1 -     15069 A
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              6372 1 +     14865 A
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                2404 1 -      9567 A
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Psammomys_obesus.NESX01026517.1                           34885 1 +     77221 g
i Psammomys_obesus.NESX01026517.1                       I 267 I 711
s Pteronotus_parnellii.KE867983.1                            4453 1 -     27784 A
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteropus_alecto.KB031157.1                             13246371 1 -  17261082 A
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             604322 1 -   3946241 A
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             30363 1 +     56732 A
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6806851 1 +   6970761 A
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             6242 1 +     18040 A
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1788198 1 +   2252614 a
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                             652 1 -     17045 A
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206378129 1 - 206558726 a
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44857043 1 -  45163003 A
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                19704 1 +    109198 A
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       8330 1 +     12214 A
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 I 4
s Saimiri_boliviensis.NW_024100938.1                     15673209 1 -  43202129 A
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        5122 1 +     34089 A
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              5064 1 -     60842 A
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              5157 1 +     67014 A
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              5135 1 +     60816 A
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 5072 1 -     76454 A
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17341797 1 -  30362882 A
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         21158 1 -     62485 A
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   32662 1 -    114521 A
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        3855 1 +     15331 A
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       9248 1 +     20762 A
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         119251 1 +    130994 A
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           38037 1 +     46263 A
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     31157 1 +     42640 A
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        14197 1 +     30600 A
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  100660 1 -    120886 T
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            19274 1 +    739146 A
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2240142 1 +   2842873 a
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Sus_scrofa.CM000824.4                                 189272490 1 + 218635234 a
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        15387 1 -  13920577 A
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                 633 1 +     20549 A
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               15077 1 +     45698 A
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      807500 1 +   1148477 A
i Tapirus_indicus.TapInd_scaffold_176                   C 0 I 4
s Tapirus_terrestris.TapTer_scaffold_14939                  58211 1 +     99546 A
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 I 4
s Theropithecus_gelada.CM009951.1                       194008251 1 - 194193292 a
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             39089 1 -     47444 A
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  5896 1 +      6782 A
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  136452 1 -    259118 A
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        27353 1 +     38948 A
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   21085 1 -     32910 A
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      2471 1 -     12939 A
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       2407 1 -     14244 A
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           43806 1 -     54611 A
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        1609 1 -     11566 A
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     3786 1 -     15592 A
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          2442 1 +     14371 A
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                    723 1 +     12481 A
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                         599 1 -     24393 A
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       5845 1 -     28054 A
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44660645 1 -  44834318 A
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       2953 1 +     13828 A
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Trichechus_manatus.JH594618.1                          16085352 1 +  31416278 a
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2793294 1 -   3938065 A
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    5494 1 +     13056 A
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69313804 1 -  96451834 A
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   1701 1 +     10241 A
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Vicugna_pacos.KN269600.1                                1525052 1 -   2331223 a
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       127257 1 -    134049 A
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           7303 1 -      8775 A
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                701732 90 +    802869 I
e Sorex_araneus.JH798170.1                               17766452 15 -  27805282 I
e Suricata_suricatta.SurSur_flattened_line_20339            27963 0 +     62062 C
e Zalophus_californianus.ZalCal_flattened_line_4097        214669 0 -    227762 C
e Vulpes_lagopus.VulLag_flattened_line_2045                138686 0 -    281493 C
e Ursus_maritimus.KK498671.1                              6515196 0 +  28682327 C
e Tragulus_javanicus.TraJav_scaffold_14717                   5555 0 +     90398 C
e Spilogale_gracilis.SpiGra_flattened_line_905             235186 0 -    276980 C
e Rangifer_tarandus.RanTarSib_scaffold_24239                16181 0 +     68503 C
e Puma_concolor.QAVW01000427.1                          131534705 0 - 161321710 C
e Pteronura_brasiliensis.PteBra_flattened_line_1343        247067 0 -    344369 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    116180 0 -    135482 C
e Panthera_tigris.KE721879.1                              5028127 0 -   6340057 C
e Panthera_pardus.KV860323.1                              3638452 0 +  18214204 C
e Panthera_onca.PanOnc_flattened_line_1615                  34718 0 +    295523 C
e Otocyon_megalotis.JAEUCK010005121.1                      308590 0 -    505867 C
e Odocoileus_virginianus.KZ101650.1                       1080084 0 +   1425656 C
e Odobenus_rosmarus.KB229369.1                             679942 0 -   3126709 C
e Nyctereutes_procyonoides.CAJHUB010000786.1                31306 0 +   3668941 C
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Neomonachus_schauinslandi.NINY01007774.1                4485275 0 -  14209539 C
e Mustela_putorius.JH417978.1                             4424757 0 -  28371801 C
e Mungos_mungo.MunMun_flattened_line_8729                  145303 0 -    168139 C
e Mirounga_angustirostris.MirAng_flattened_line_8852        11885 0 -    104932 C
e Mellivora_capensis.MelCap_flattened_line_15433             1388 0 -     87323 C
e Megaderma_lyra.MegLyr_scaffold_3562                       64783 239 -    234502 I
e Manis_pentadactyla.KN017078.1                             36586 0 +     58827 C
e Manis_javanica.JSZB01003966.1                            146443 0 +    252755 C
e Lycaon_pictus.CM007556.1                               11088506 0 +  39895028 C
e Leptonychotes_weddellii.KB714749.1                      3086369 0 -   3498232 C
e Hyaena_hyaena.HyaHya_flattened_line_20729                 17677 0 -     67322 C
e Helogale_parvula.HelPar_flattened_line_22962              17608 0 +     53719 C
e Felis_nigripes.FelNig_flattened_line_8080                 21553 0 +     52776 C
e Felis_catus_fca126.CM031420.1                         129280413 0 - 158578461 C
e Enhydra_lutris.KZ291749.1                              85872576 0 +  99434291 C
e Elephantulus_edwardii.JH947210.1                        7816099 793 +  15467074 I
e Elaphurus_davidianus.JRFZ01086400.1                     1491854 0 +   1727528 C
e Diceros_bicornis.DicBicMic_scaffold_9545                   3563 4 +    151128 I
e Cryptoprocta_ferox.CryFer_flattened_line_19014            52402 0 -     70449 C
e Crocidura_indochinensis.CroInd_scaffold_848148              199 0 +      1327 C
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1008 325 -      5782 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_160623         4016 4 -      9338 I
e Catagonus_wagneri.CatWag_scaffold_1305                   159266 0 -    276539 C
e Canis_lupus_orion.HG994411.1                           16456065 0 -  44759192 C
e Canis_lupus_familiaris.chr31                           11089050 0 +  39895921 C
e Canis_lupus_dingo.QKWQ01001993.1                       11266516 0 -  35597290 C
e Canis_lupus_VD.CanFam_VD_scaffold_16982                   14874 0 +     87036 C
e CanFam4.chr31                                          11519849 0 +  39901454 C
e Ailurus_fulgens.LNAC01000003.1                          7095051 0 -  16596857 C
e Ailuropoda_melanoleuca.LNAT01000321.1                  10657703 0 +  23371972 C
e Acinonyx_jubatus.LLWD01000356.1                         2034366 0 +   3721120 C
e Zapus_hudsonius.ZapHud_scaffold_64392                     15583 0 -     20485 C
e Hylobates_klossii.k141_285563                               343 193 +      1026 I
e Microtus_ochrogaster.CM001673.1                        22820341 4 -  98408828 I
e Varecia_variegata.k141_775891                             25239 0 -     33872 C
e Varecia_rubra.k141_432109                                  5698 0 -     20643 C
e Tarsius_wallacei.k141_48636                               60215 0 +     65473 C
e Tarsius_lariang.k141_609102                               26899 0 +     42269 C
e Rattus_norvegicus.chr11                                13915860 1475 +  90463843 I
e Propithecus_verreauxi.k141_158021                         39619 0 -     48185 C
e Propithecus_tattersalli.k141_907138                       17355 0 -     53241 C
e Propithecus_perrieri.k141_7554                            17719 0 +     27322 C
e Propithecus_edwardsi.k141_1317105                         35795 0 -     44753 C
e Propithecus_diadema.k141_577245                           43408 0 +     52369 C
e Propithecus_coronatus.k141_1353159                         4065 0 +     11805 C
e Propithecus_coquerelli.NW_012147863.1                     19144 0 -     30946 C
e Prolemur_simus.MPIZ01000048.1                           6849001 0 +  12164890 C
e Ondatra_zibethicus.OndZib_scaffold_6821                  125594 4 +    145789 I
e Mirza_zaza.k141_226143                                     6030 0 +      8497 C
e Microcebus_murinus.CM007691.1                          16510642 0 +  47401472 C
e Lepilemur_septentrionalis.k141_578524                     32007 0 -     33031 C
e Lepilemur_ruficaudatus.k141_617879                        79016 0 +    116806 C
e Lepilemur_dorsalis.k141_134267                            53752 0 +     63517 C
e Lepilemur_ankaranensis.k141_884009                        24368 0 +     39228 C
e Lemur_catta.scaffold_1                                258407624 0 - 285822530 C
e Indri_indri.k141_5141390                                    783 0 -      3181 C
e Hapalemur_occidentalis.k141_797938                        45943 0 -     54384 C
e Hapalemur_meridionalis.k141_186231                        29320 0 -     42470 C
e Hapalemur_griseus.k141_1387522                             6069 0 +     56096 C
e Hapalemur_gilberti.k141_279011                              740 0 -     11661 C
e Hapalemur_alaotrensis.k141_1280836                         2263 0 +     10286 C
e Graphiurus_murinus.GraMur_scaffold_4493                   77863 0 +    118900 C
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I
e Eulemur_sanfordi.k141_186399                              16271 0 -     29447 C
e Eulemur_rufus.k141_1620292                                33547 0 +     46535 C
e Eulemur_rubriventer.k141_411740                           18809 0 +     26808 C
e Eulemur_mongoz.k141_825972                                16352 0 +     27497 C
e Eulemur_macaco.k141_1341545                               16077 0 +     16540 C
e Eulemur_fulvus.k141_653297                                11691 0 +    109717 C
e Eulemur_flavifrons.k141_903901                             8215 0 +     60246 C
e Eulemur_coronatus.k141_3240342                            11894 0 +     36558 C
e Eulemur_collaris.k141_311830                               5417 0 -      6809 C
e Eulemur_albifrons.k141_715837                              5486 0 +     13586 C
e Ellobius_talpinus.LOJH01090055.1                           7151 4 -      7838 I
e Ellobius_lutescens.LOEQ01003611.1                        240029 1 -    369425 I
e Daubentonia_madagascariensis.ctg11                     16845287 0 +  31942871 C
e Cheirogaleus_medius.k141_133808                            8475 0 +     13308 C
e Cheirogaleus_major.k141_1157592                           59430 0 -     68416 C
e Cephalopachus_bancanus.k141_702587                         8453 0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          309425 0 +    345090 C
e Avahi_peyrierasi.k141_798820                                769 0 +      6337 C
e Avahi_laniger.k141_2840928                                 7150 0 -     16375 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               12233 12 +    209709 TT-T-TT-ATT--------A------A-------A-T
s Acinonyx_jubatus.LLWD01000356.1                         2034366  8 +   3721120 ----------T-----ATCA------A-------A-T
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    112939 13 -    189883 AA-T-TTAATA--------A------A-------A-T
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10657703  8 +  23371972 ----------catt-----a------a-------a-t
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7095051  8 -  16596857 ----------tatt-----a------a-------a-t
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   17262 12 -     22067 TT-T-TT-ATT--------A------A-------A-T
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   1743 12 -     60446 TT-T-TT-ATT--------A------A-------A-T
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         2463 12 -     29318 TT-T-TT-ATT--------A------A-------A-T
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         1398 12 +     38766 TT-T-TT-ATT--------A------A-------A-T
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          2357 12 -     80423 TT-T-TT-ATT--------A------A-------A-T
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            10660 12 -     18050 TT-T-CT-GTT--------A------A-------A-T
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_1710068                                375 12 +      1555 TT-C-CT-ATT--------A------A-------A-T
i Alouatta_caraya.k141_1710068                          C 0 C 0
s Alouatta_discolor.k141_811576                             11333 12 -     21359 TT-T-CT-GTT--------A------A-------A-T
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                 954 12 +      2129 TT-C-CT-ATT--------A------A-------A-T
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_2177643                           338 12 -      1868 TT-C-CT-ATT--------A------A-------A-T
i Alouatta_macconnelli.k141_2177643                     C 0 C 0
s Alouatta_nigerrima.k141_3537692                             387 12 +      1660 TT-C-CT-ATT--------A------A-------A-T
i Alouatta_nigerrima.k141_3537692                       C 0 C 0
s Alouatta_palliata.k141_2764429                              302 12 -      1480 TT-T-CT-GTT--------A------A-------A-T
i Alouatta_palliata.k141_2764429                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            4380 12 -      4927 TT-C-CT-ATT--------A------A-------A-T
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_1531728                             517 12 -      1692 TT-T-CT-GTT--------A------A-------A-T
i Alouatta_seniculus.k141_1531728                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3520508  6 +   4113121 ----------a--------t------a-------agt
i Ammotragus_lervia.NIVO01013474.1                      I 4 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      390906 12 -    631301 ----------T--------T------TTTATTAAG-T
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            31091  6 +     33004 ----------A--------T------A-------AGT
i Antilocapra_americana.AntAmePen_scaffold_42841        I 6 C 0
s Aotus_azarae.k141_3170768                                 63012 12 +     78111 TT-T-CT-ATT--------A------A-------A-T
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            5954 12 +     22701 TT-T-CT-ATT--------A------A-------A-T
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5749911 12 +   9889416 tt-t-ct-att--------a------a-------a-t
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             6500 12 -    104377 TT-T-CT-ATT--------A------A-------A-T
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               6502 12 +     23246 TT-T-CT-ATT--------A------A-------A-T
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     4056 12 +      5067 TT-T-TC-ATT--------A------G-------A-T
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        1421 12 +      9265 AT-G-TT-ATT--------G------A-------A-T
i Arctocebus_calabarensis.k141_587554                   C 0 I 13
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 9323 12 -     29036 ----------T--------T------TTTATTAAG-T
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9539771 12 +  39197703 TT-T-CT-ATT--------A------A-------A-T
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             61042 12 +     85812 TT-T-CT-ATT--------A------A-------A-T
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                12055 12 +     89302 TT-T-CT-ATT--------A------A-------A-T
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             16558 12 -     58268 TT-T-CT-ATT--------A------A-------A-T
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             64550 12 +    119057 TT-T-CT-ATT--------A------A-------A-T
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               6521 12 -     25888 TT-T-CT-ATT--------A------A-------A-T
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 7150  9 -     16375 -----TT-ATT--------A------A-------A-T
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                                769  9 +      6337 -----TT-ATT--------A------A-------A-T
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26380578 11 +  51448160 ----------t--------ttttataa-------g-t
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        5750 11 -     13118 ----------t--------ttttataa-------g-t
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   43578  6 -     72089 ----------A--------T------A-------AGT
i Beatragus_hunteri.BeaHun_scaffold_21644               I 4 C 0
s Bison_bison.KN264915.1                                  6560241  6 +   6870073 ----------a--------t------a-------agt
i Bison_bison.KN264915.1                                I 4 C 0
s Bos_indicus.CM003021.1                                138140350  6 - 161108492 ----------a--------t------a-------agt
i Bos_indicus.CM003021.1                                I 4 C 0
s Bos_mutus.JH883513.1                                     572891  6 -    998990 ----------a--------t------a-------agt
i Bos_mutus.JH883513.1                                  I 4 C 0
s Bos_taurus.CM000177.6                                 136296083  6 - 158972876 ----------a--------t------a-------agt
i Bos_taurus.CM000177.6                                 I 4 C 0
s Bubalus_bubalis.KI419065.1                              1233162  6 -   1914593 ----------a--------t------a-------agt
i Bubalus_bubalis.KI419065.1                            I 4 C 0
s Cacajao_ayresi.k141_724503                               114408 12 -    171031 TT-T-CT-ATT--------A------A-------A-T
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 13437 12 +    125063 TT-T-CT-ATT--------A------A-------A-T
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                15480 12 -    216513 TT-T-CT-ATT--------A------A-------A-T
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        8023 12 -    134917 TT-T-CT-ATT--------A------A-------A-T
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3219948  6 -   8989139 ----------t--------t------a-------act
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           397649  6 -  15254737 ----------t--------t------a-------act
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2973385  6 +   6889770 ----------t--------t------a-------act
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11519849  8 +  39901454 ----------T-----ATTA------A-------A-T
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   14874  8 +     87036 ----------T-----ATTA------A-------A-T
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11266516  8 -  35597290 ----------tatt-----a------a-------a-t
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11089050  8 +  39895921 ----------tatt-----a------a-------a-t
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16456065  8 -  44759192 ----------tatt-----a------a-------a-t
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21325584  6 + 157394656 ----------a--------t------a-------agt
i Capra_aegagrus.CM003214.1                             I 4 C 0
s Capra_hircus.CM004562.1                               135706812  6 - 157403528 ----------a--------t------a-------agt
i Capra_hircus.CM004562.1                               I 4 C 0
s Carlito_syrichta.NW_007248099.1                          309425 10 +    345090 ---t-tt-att--------a------a-------a-t
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               60106 11 +     67245 ----------T--------T------TTT-TTAAG-T
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   31497 12 +     33760 TT-T-TT-AGT--------A------A-------A-T
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   159266 11 -    276539 -------------------T------TTTATTAAA-A
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15786997 12 -  24422027 TT-T-AT-ATT--------C------A-------G-T
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15798933 12 -  24440124 TT-T-AT-ATT--------C------A-------G-T
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       177124 12 +    436027 TT-T-AT-ATT--------C------A-------G-T
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18891254 12 -  29618158 TT-T-CC-ATT--------A------A-------A-T
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 8798 12 -     26817 TT-T-CC-ATT--------A------A-------A-T
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                13041 12 +     25043 TT-T-CC-ATT--------A------A-------A-T
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         8453 10 +     21754 ---T-TT-ATT--------A------A-------A-T
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4364263  8 +   7569818 ----------tatt-----a------a-------a-t
i Ceratotherium_simum.JH767818.1                        I 4 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         4020  8 -      9338 ----------T-----ATTA------A-------A-T
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    I 4 C 0
s Cercocebus_atys.KQ010443.1                              6555689 12 +   6739814 tt-t-tt-att--------a------a-------a-t
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      27166 12 +     60454 TT-T-TT-ATT--------A------A-------A-T
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          2372 12 -     21101 TT-T-TT-ATT--------A------A-------A-T
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         59681 12 -    107033 TT-T-TT-ATT--------A------A-------A-T
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        2571 12 -     17608 TT-T-TT-ATT--------A------A-------A-T
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          30067 12 +     30494 TT-T-TT-ATT--------A------A-------A-T
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          58912 12 -     59240 TT-T-TT-ATT--------A------A-------A-T
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          2613 12 +     16677 TT-T-TT-ATT--------A------A-------A-T
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           24772 12 +     35983 TT-T-TT-ATT--------A------A-------A-T
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11991298 12 +  12117833 TT-T-TT-ATT--------A------A-------A-T
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46478058 12 +  46592721 TT-T-TT-ATT--------A------A-------A-T
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      41608 12 -     45581 TT-T-TT-ATT--------A------A-------A-T
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       2614 12 +     35577 TT-T-TT-ATT--------A------A-------A-T
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        2389 12 -     25661 TT-T-TT-ATT--------A------A-------A-T
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        2369 12 -     17744 TT-T-TT-ATT--------A------A-------A-T
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        21984 12 +     37128 TT-T-TT-ATT--------A------A-------A-T
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           3138 13 -      6963 TTTT-TT-AGT--------A------A-------A-T
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           59430  9 -     68416 -----TT-ATT--------A------A-------A-T
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            8475  9 +     13308 -----TT-ATT--------A------A-------A-T
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             6065 12 -     18223 TT-T-CT-ATT--------A------A-------A-T
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             23083 12 +     25473 TT-T-CT-ATT--------A------A-------A-T
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           42123 12 +     57117 TT-T-CT-ATT--------A------A-------A-T
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          46802 12 +     54541 TT-T-CT-ATT--------A------A-------A-T
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15962123 12 +  43084221 TT-T-AT-ATT--------A------A-------C-C
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         71609 12 +    196370 TT-T-CT-ATT--------A------A-------A-T
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          15789 12 +     40510 TT-T-CT-ATT--------A------A-------A-T
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15139504 12 -  15256731 TT-T-TT-ATT--------A------A-------A-T
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      34585 12 -     53260 TT-T-TT-ATT--------A------A-------A-T
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101145145 12 + 101219884 tt-t-tt-att--------a------a-------a-t
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                16846 12 -     21363 TT-T-TT-AGT--------A------A-------A-T
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           762149 12 +    964067 tt-t-tt-agt--------a------a-------a-t
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10886914 12 +  10971483 tt-t-tt-att--------a------a-------a-a
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147665079 12 + 156195979 TT-T-TT-ATT--------A------A-------A-A
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            17064 12 +     23629 TT-T-TT-ATT--------A------A-------A-A
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60613976  5 +  78930452 ----------a--------t------t-------t-t
i Condylura_cristata.JH655880.1                         C 0 I 3
s Cricetomys_gambianus.CriGam_scaffold_949                 278909 13 -    399297 TT-T-TTAATC--------A------A-------A-T
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53029594 13 +  72327488 TT-G-TTAACC--------A------A-------A-T
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            52402  8 -     70449 ----------T-----ATTA------A-------A-C
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  208588  6 -    956709 CT-T-GT-A----------------------------
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 I 1
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 31039 12 -     67205 TT-T-AT-ATT--------A------A-------C-T
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                18159 12 +     26546 TT-T-CT-ATT--------A------A-------A-T
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             59247 12 -    236241 TT-T-AT-ATT--------C------A-------A-T
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          184023 12 -   6883506 AT-T-TC-AGT--------T------A-------G-T
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16845287  9 +  31942871 -----TT-ATC--------A------A-------A-T
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80037202 11 -  96802777 ----------t--------ttttgtaa-------g-t
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18699384 12 -  18957592 ----------T--------T------TTTATTAAG-T
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 322916  8 +    993696 ----------tatt-----a------a-------a-t
i Dicerorhinus_sumatrensis.PEKH010003161.1              I 4 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   3567  8 +    151128 ----------T-----ATTA------A-------A-T
i Diceros_bicornis.DicBicMic_scaffold_9545              I 4 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   157387 12 +    228994 TT-T-AT-ATT--------A------A-------A-T
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3656696 12 +   4240102 tt-t-tt-att--------a------a-------a-t
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 28339 12 +     28912 TT-T-TT-ATT--------A------A-------A-T
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                36471 12 -     73477 TT-T-AT-ACC--------C------A-------G-T
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Eidolon_helvum.KE772537.1                                 12643  1 +     24177 ------------------------------------T
i Eidolon_helvum.KE772537.1                             I 4 C 0
s Echinops_telfairi.JH980316.1                           22998956  6 -  44670279 TT-T-TT-A----------------------------
i Echinops_telfairi.JH980316.1                          C 0 I 3
s Elaphurus_davidianus.JRFZ01086400.1                     1491854  6 +   1727528 ----------A--------T------A-------AGT
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Enhydra_lutris.KZ291749.1                              85872576  8 +  99434291 ----------tatt-----a------a-------a-t
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4704546 12 +   6522550 ----------t--------t------tttattaag-t
i Eptesicus_fuscus.JH977687.1                           C 0 I 408
s Equus_asinus.JREZ01000062.1                             5853364  8 -   7175178 ----------tatt-----a------a-------a-t
i Equus_asinus.JREZ01000062.1                           I 4 C 0
s Equus_caballus.CM000402.2                              13351869  8 +  41866177 ----------tatt-----a------a-------a-t
i Equus_caballus.CM000402.2                             I 4 C 0
s Equus_przewalskii.ATBW01073585.1                          13358  8 +     92910 ----------tatt-----a------a-------a-t
i Equus_przewalskii.ATBW01073585.1                      I 4 C 0
s Erinaceus_europaeus.JH835290.1                         11534638  5 +  16010500 ----------A--------T------T-------C-T
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48774277  7 -  48907691 --------ATT--------A------A-------A-T
i Erythrocebus_patas.Contig8                            I 5 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          315418 11 +    330699 ----------T--------TTTTATAA-------G-T
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             61871 11 +     89355 ----------T--------TTTTATAA-------G-T
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Felis_catus.CM001386.2                                129893321  8 - 159252932 ----------T-----ATCA------A-------A-T
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129280413  8 - 158578461 ----------T-----ATCA------A-------A-T
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 21553  8 +     52776 ----------T-----ATCA------A-------A-T
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Eulemur_albifrons.k141_715837                              5486  1 +     13586 -----T-------------------------------
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               5417  1 -      6809 -----T-------------------------------
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            11894  1 +     36558 -----T-------------------------------
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             8215  1 +     60246 -----T-------------------------------
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                11691  1 +    109717 -----T-------------------------------
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               16077  1 +     16540 -----T-------------------------------
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                16352  1 +     27497 -----T-------------------------------
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           18809  1 +     26808 -----T-------------------------------
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                33547  1 +     46535 -----T-------------------------------
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              16271  1 -     29447 -----T-------------------------------
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Galago_moholi.ctg555                                     211315 12 -    847004 AT-G-TT-ACT--------G------A-------A-T
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           13689 12 -     43889 AT-G-TT-ACT--------G------A-------A-T
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          10763 12 +     27357 AT-G-TT-ATT--------G------A-------A-T
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               156678 12 +    324696 TT-T-TT-ATT--------A------A-------A-T
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    181653  6 -    189561 ----------a--------a------a-------agt
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 4 C 0
s Glis_glis.GliGli_scaffold_79770                           13447 12 -     18683 TTTT--T-AAA--------A------A-------A-A
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               5746 12 -     14630 TT-T-TT-ATT--------A------A-------A-T
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119652846 12 - 195582420 tt-t-tt-att--------a------a-------a-t
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              17608  8 +     53719 ----------T-----ATTA------A-------A-T
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                27868  6 -     91191 ----------A--------T------C-------AGT
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 4 C 0
s Heterocephalus_glaber.JH602058.1                        2551483  7 +  31725842 --------att--------a------a-------a-t
i Heterocephalus_glaber.JH602058.1                      I 5 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               61303  7 +     73687 --------ATT--------A------A-------A-T
i Heterohyrax_brucei.HetBruBak_scaffold_25354           I 5 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              147504 11 +    277961 ----------C--------TTTCATAA-------G-T
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      278775  3 -    477199 ----------a--------t------t----------
i Hipposideros_armiger.JXIK01001085.1                   C 0 I 6
s Hipposideros_galeritus.HipGal_scaffold_104691              7921  3 -      9143 ----------A--------T------T----------
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 I 6
s Hapalemur_alaotrensis.k141_1280836                         2263  1 +     10286 -----T-------------------------------
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                              740  1 -     11661 -----T-------------------------------
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             6069  1 +     56096 -----T-------------------------------
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        29320  1 -     42470 -----T-------------------------------
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        45943  1 -     54384 -----T-------------------------------
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Hoolock_leuconedys.ctg79                                      5433 12 -   7690867 TT-T-TT-ATT--------A------A-------A-T
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 17677  8 -     67322 ----------T-----ATTA------A-------A-T
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19378 12 -    119109 TT-T-AT-ATT--------C------A-------G-T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_164775                               237 12 -      2073 TT-T-TT-ATT--------A------A-------A-T
i Hylobates_abbotti.k141_164775                         C 0 C 0
s Hylobates_agilis.k141_1878600                               474 12 -      1230 TT-T-TT-ATT--------A------A-------A-T
i Hylobates_agilis.k141_1878600                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14625127 12 -  25970782 TT-T-TT-ATT--------A------A-------A-T
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            2383 12 -      2977 TT-T-TT-ATT--------A------A-------A-T
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             34286 12 -     60944 TT-T-TT-ATT--------A------A-------A-T
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     6548 12 +     22540 TT-T-AT-GTT--------A------A-------A-T
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7126227 12 +  13083262 tt-t-tc-ata--------a------a-------a-t
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_5141390                                    783  9 -      3181 -----TT-ATT--------A------A-------A-T
i Indri_indri.k141_5141390                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               9407 11 +     17520 ----------T--------GTTTTTAA-------G-T
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8566276 12 +  11848649 tt-t-tt-att--------a------a-------a-t
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               24019 11 +     37189 ----------T--------TTTTATAA-------G-T
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          50640 12 -    147782 TT-T-CT-ATT--------A------A-------A-T
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                     212 12 +     26176 ----------T--------T------TTTATTAAC-T
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 I 498
s Lemur_catta.scaffold_1                                258407624  1 - 285822530 -----T-------------------------------
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        24368  9 +     39228 -----TT-ATT--------A------A-------A-T
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            53752  9 +     63517 -----TT-ATT--------A------A-------A-T
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        79016  9 +    116806 -----TT-ATT--------A------A-------A-T
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     32007  9 -     33031 -----TT-ATT--------A------A-------A-T
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3086369  8 -   3498232 ----------tatt-----a------a-------a-t
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    13646 13 +     22452 TT-TTTT-GTT--------A------A-------A-T
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            136363 11 +   3060487 ----------t--------ttttgtaa-------g-t
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19248783 12 +  19376315 TT-T-TT-ATT--------A------A-------A-T
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           11064 12 +     84689 AT-G-TT-ATT--------G------A-------A-T
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3778813 12 +   6799190 AT-G-TT-ATT--------G------A-------A-T
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20594678 12 -  62548349 tt-t-tt-att--------a------a-------a-t
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11088506  8 +  39895028 ----------tatt-----a------a-------a-t
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             20518 12 +     74745 TT-T-TT-ATT--------A------A-------A-T
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12706975 12 +  12821369 TT-T-TT-ATT--------A------A-------A-T
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                2617 12 -      3136 TT-T-TT-ATT--------A------A-------A-T
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           47435 12 +     63263 TT-T-TT-ATT--------A------A-------A-T
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                 2140 12 -      2568 TT-T-TT-ATT--------A------A-------A-T
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 2725 12 -      7381 TT-T-TT-ATT--------A------A-------A-T
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  45942 12 -     79256 TT-T-TT-ATT--------A------A-------A-T
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196036049 12 + 196197964 tt-t-tt-att--------a------a-------a-t
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11446219 12 +  11645122 tt-t-tt-att--------a------a-------a-t
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   4889 12 -     46448 TT-T-TT-ATT--------A------A-------A-T
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                2563 12 -     13212 TT-T-TT-ATT--------A------A-------A-T
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 16242 12 -     55006 TT-T-TT-ATT--------A------A-------A-T
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43841358 12 +  43892939 TT-T-TT-ATT--------A------A-------A-T
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               17528 12 -     24607 TT-T-TT-ATT--------A------A-------A-T
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               4894 12 -     27140 TT-T-TT-ATT--------A------A-------A-T
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43437943 12 -  43563597 TT-T-TT-ATT--------A------A-------A-T
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4450763 12 -   4543643 TT-T-TT-ATT--------A------A-------A-T
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            146443 13 +    252755 ----------tattttatta------a-------a-t
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             36586 13 +     58827 ----------tattttatta------a-------a-t
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36874051 12 +  64221397 tt-t-tc-ata--------a------a-------a-t
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             1388  8 -     87323 ----------T-----ATTA------A-------A-T
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               13313 13 +     15977 tt-t-cTAATC--------A------A-------A-T
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1047280 13 -  26018355 tt-t-ttaatc--------a------a-------a-t
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_227248                    691 11 -      1377 ----------T--------GTTGTTAA-------G-T
i Mesoplodon_bidens.MesBid_scaffold_227248              C 0 C 0
s Microcebus_murinus.CM007691.1                          16510642  9 +  47401472 -----tt-att--------a------a-------a-t
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  34967  6 -     48017 TT-T-TT-A----------------------------
i Microgale_talazaci.MicTal_scaffold_34660              C 0 I 3
s Micronycteris_hirsuta.MicHir_scaffold_37978               23296 12 -     32043 ----------T--------T------TTTATTAAG-T
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8210452 12 +  10048721 ----------t--------t------tttattcag-t
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            34941 12 +     45743 ----------T--------T------TTTATTCAG-T
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         2492 12 +     29742 TT-T-TT-ATT--------A------A-------A-T
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        11885  8 -    104932 ----------T-----ATTA------A-------A-T
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     6030  9 +      8497 -----TT-CTT--------A------A-------A-T
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 146792 11 +    154973 ----------T--------TTTTGTAA-------G-T
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                161814 12 +    265003 ----------T--------T------TTTATTAAG-T
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  1884  6 -     19904 ----------A--------T------A-------AGT
i Moschus_moschiferus.MosMos_scaffold_78805             I 5 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  145303  8 -    168139 ----------T-----ATTA------A-------A-T
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          19916 12 -    100666 ----------T--------T------TTTATTAAG-T
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70766913 13 +  92629107 ct-t-ttaatc--------a------a-------a-t
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75489973 13 +  98207768 CT-T-TTAATC--------A------A-------A-T
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67556211 13 +  89017189 CT-T-TTCATC--------A------A-------A-T
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74331148 13 +  97876770 CT-T-TTAATC--------A------A-------C-T
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             12202 11 +     98495 TT-T--T-ATT--------A------A-------C-T
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4424757  8 -  28371801 ----------tatt-----a------a-------a-t
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     90330 12 -    117718 TT-C-AT-ACT--------A------A-------A-T
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 I 9
s Myotis_brandtii.KE161952.1                               968227 12 +   8389877 ----------t--------t------tttattaag-t
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5019900 12 +   6462685 ----------t--------t------tttattaag-t
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3465809 12 -   3747815 ----------t--------t------tttattaag-t
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        11019 12 +     66751 ----------T--------T------TTTATTAAG-T
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             5413  8 -      8794 TT-T-TC-AGT--------------------------
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            119062 12 +    362372 TT-T-TT-ATC--------A------A-------A-T
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                               8999 12 +     48152 TT-T-TT-ATT--------A------A-------A-A
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4485275  8 -  14209539 ----------tatt-----a------a-------a-t
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3951404 11 -   4490290 ----------t--------ttttgtaa-------g-t
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Nomascus_annamensis.k141_720788                             381 12 -      1065 TT-T-TT-ATT--------A------A-------A-T
i Nomascus_annamensis.k141_720788                       C 0 C 0
s Nomascus_concolor.k141_226614                              1685 12 -      5092 TT-T-TT-ATT--------A------A-------A-T
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_1004198                            252 12 +      1448 TT-T-TT-ATT--------A------A-------A-T
i Nomascus_gabriellae.k141_1004198                      C 0 C 0
s Nomascus_siki_b.tarseq_80                             25403 12 -  18771707 TT-T-TT-ATT--------A------A-------A-T
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  3106 12 +      4512 TT-T-TT-ATT--------A------A-------A-T
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                31306  8 +   3668941 ----------tatt-----a------a-------a-t
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65567508 12 -  95554990 AT-G-TT-ATT--------G------A-------A-T
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            4234 12 +      6470 AT-G-TT-ATT--------G------A-------A-T
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65669843 12 +  89412551 AT-G-TT-ATT--------G------A-------A-T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4996395 13 -  23139505 TT-TTTC-CTT--------C------A-------A-T
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3685870 12 +  10294119 TT-T-AT-ATT--------A------A-------C-T
i Octodon_degus.JH651621.1                              C 0 I 1
s Odobenus_rosmarus.KB229369.1                             679942  8 -   3126709 ----------tatt-----a------a-------a-t
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1080084  6 +   1425656 ----------A--------T------A-------AGA
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         37381  6 +     78940 ----------a--------t------a-------agt
i Okapia_johnstoni.LVCL01S0017931.1                     I 4 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  37471 13 +     62360 TT-T-TTAAAC--------T------A-------A-C
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7225089 11 -   7562323 ----------t--------ttttgtaa-------g-t
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              57972 12 -     66828 TT-T-TT-ATA--------T------A-------A-T
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141876680 13 + 163896628 tt-tttt-gtt--------a------a-------a-t
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      308590  8 -    505867 ----------tatt-----a------a-------a-t
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        1133 12 -     53940 AT-G-TT-GCT--------G------A-------A-T
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18009113 12 -  38779656 AT-G-TT-ACT--------G------A-------A-T
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134077659  6 - 275406953 ----------a--------t------a-------agt
i Ovis_aries.CM001582.2                                 I 4 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      78874  6 +    140051 ----------A--------T------C-------AGT
i Ovis_canadensis.OviCan_scaffold_6251                  I 4 C 0
s Pan_paniscus.CM003386.1                               127575112 12 - 205426864 tt-t-tt-att--------a------a-------a-t
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120152266 12 - 196562556 tt-t-tt-att--------a------a-------a-t
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  34718  8 +    295523 ----------T-----ATCA------A-------A-T
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3638452  8 +  18214204 ----------T-----ATCA------A-------A-T
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5028127  8 -   6340057 ----------T-----ATCA------A-------A-T
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1066509  6 -   1292953 ----------a--------t------a-------agt
i Pantholops_hodgsonii.KE114631.1                       I 4 C 0
s Papio_anubis.CM001492.2                               188156730 12 - 188283584 tt-t-tt-att--------a------a-------a-t
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             5047 12 +      5367 TT-T-TT-ATT--------A------A-------A-T
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47514115 12 +  47705337 TT-T-TT-ATT--------A------A-------A-T
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 68091 12 -    104429 TT-T-TT-ATT--------A------A-------A-T
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    6627 12 +     14967 TT-T-TT-ATT--------A------A-------A-T
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 2486 12 -      7628 TT-T-TT-ATT--------A------A-------A-T
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    116180  8 -    135482 ----------T-----TTTT------T-------T-T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           5822 12 -     23713 AC-G-TT-ATT--------G------A-------A-T
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            25135 12 -     27972 AC-G-TT-ATT--------G------A-------A-T
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359        215 12 +     49596 TT-T-TT-ATT--------A------A-------A-T
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4950719 13 -   8017169 TT-T-TTAATC--------T------A-------A-C
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    13294 12 -     36578 TT-T-AT-ACT--------A------A-------A-T
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            121694 11 -    122454 ----------T--------TTTTGTAA-------G-T
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1987485                           2513 12 -      5908 TT-T-TT-ATT--------A------A-------A-A
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       3137 12 -     17985 TT-T-TT-ATT--------A------A-------A-A
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            2504 12 +      7694 TT-T-TT-ATT--------A------A-------A-A
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26740982 12 +  26888534 tt-t-tt-att--------a------a-------a-a
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            97844 12 +    112873 ----------T--------T------TTTATGAAG-T
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 I 455
s Pithecia_albicans.k141_991845                             44246 12 -     61926 TT-T-CT-ATT--------A------A-------A-T
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        25631 12 +     78826 TT-T-CT-ATT--------A------A-------A-T
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              9678 12 -     15800 TT-T-CT-ATT--------A------A-------A-T
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        12877 12 -     16101 TT-T-CT-ATT--------A------A-------A-T
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          6105 12 +      9673 TT-T-CT-ATT--------A------A-------A-T
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13475105 12 -  19735023 TT-T-CT-ATT--------A------A-------A-T
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           14008 12 -     31692 TT-T-CT-ATT--------A------A-------A-T
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           5780 11 +     21690 ----------T--------TTTTATAA-------A-T
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       23348 12 +     44506 TT-T-CT-ATT--------A------A-------A-T
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        23560 12 +     67491 TT-T-CT-ATT--------A------A-------A-T
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      13800 12 -     98129 TT-T-CT-ATT--------A------A-------A-T
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     23400 12 +    147771 TT-T-CT-ATT--------A------A-------A-T
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        23657 12 -     23762 TT-T-CT-ATT--------A------A-------A-T
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          4119 12 -     55515 TT-T-CT-ATT--------A------A-------A-T
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         23473 12 +    152463 TT-T-CT-ATT--------A------A-------A-T
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       1190 12 -    119457 TT-T-CT-ATT--------A------A-------A-T
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         13196 12 +    134592 TT-T-CT-ATT--------A------A-------A-T
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          23783 12 -     75465 TT-T-CT-ATT--------A------A-------A-T
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              187632 12 -    373494 tt-t-tt-att--------a------a-------a-t
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19808280 12 +  19899266 TT-T-TT-ATT--------A------A-------A-T
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               6243 12 -     15069 TT-T-TT-ATT--------A------A-------A-A
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              6373 12 +     14865 TT-T-TT-ATT--------A------A-------G-A
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                2405 12 -      9567 TT-T-TT-ATT--------A------A-------A-T
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6849001  1 +  12164890 -----T-------------------------------
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     19144  9 -     30946 -----nn-nnn--------n------n-------n-n
i Propithecus_coquerelli.NW_012147863.1                 C 0 I 18
s Propithecus_coronatus.k141_1353159                         4065  9 +     11805 -----TT-ATT--------A------A-------A-T
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           43408  9 +     52369 -----TT-ATT--------A------A-------A-T
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         35795  9 -     44753 -----TT-ATT--------A------A-------A-T
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            17719  9 +     27322 -----TT-ATT--------A------A-------A-T
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       17355  9 -     53241 -----TT-ATT--------A------A-------A-T
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         39619  9 -     48185 -----TT-ATT--------A------A-------A-T
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           35597 13 +     77221 TT-T-CTAATC--------A------A-------A-T
i Psammomys_obesus.NESX01026517.1                       I 711 C 0
s Pteronotus_parnellii.KE867983.1                            4454 12 -     27784 ----------C--------T------TTTATTAAG-T
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        247067  8 -    344369 ----------T-----ATTA------A-------A-T
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13246372  9 -  17261082 ----------T--------T------TGTA--A-G-T
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             604323  9 -   3946241 ----------T--------T------TGTA--A-G-T
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131534705  8 - 161321710 ----------T-----ATCA------A-------A-T
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             30364 12 +     56732 TT-T-TT-ATT--------A------A-------A-A
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6806852 12 +   6970761 TT-T-TT-ATT--------A------A-------A-A
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             6243 12 +     18040 TT-T-TT-ATT--------A------A-------A-A
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                16181  6 +     68503 ----------A--------T------A-------AGA
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1788199  3 +   2252614 ----------t--------t------t----------
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 I 6
s Rhinopithecus_bieti.k119_554384                             653 12 -     17045 TT-T-TT-ATT--------A------A-------A-A
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206378130 12 - 206558726 tt-t-tt-att--------a------a-------a-a
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44857044 12 -  45163003 TT-T-TT-ATT--------A------A-------A-A
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                19705  9 +    109198 ----------T--------T------T--AT-AAG-T
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       8335  6 +     12214 ----------A--------T------A-------AGT
i Saiga_tatarica.SaiTat_scaffold_82192                  I 4 C 0
s Saimiri_boliviensis.NW_024100938.1                     15673210 12 -  43202129 TT-A-CT-ATG--------A------A-------A-T
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        5123 12 +     34089 TT-T-CT-ATG--------A------A-------A-T
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              5065 12 -     60842 TT-T-CT-ATG--------A------A-------A-T
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              5158 12 +     67014 TT-T-CT-ATG--------A------A-------A-T
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              5136 12 +     60816 TT-T-CT-ATG--------A------A-------A-T
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 5073 12 -     76454 TT-T-CT-ATG--------A------A-------A-T
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17341798 12 -  30362882 TT-T-CT-ATT--------A------A-------A-T
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         21159 12 -     62485 TT-T-CT-ATT--------A------A-------A-T
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   32663  5 -    114521 ----------A--------T------T-------T-A
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 I 3
s Semnopithecus_entellus.k141_1572367                        3856 12 +     15331 TT-T-TT-ATT--------A------A-------A-A
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       9249 12 +     20762 TT-T-TT-ATT--------A------A-------A-A
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         119252 12 +    130994 TT-T-TT-ATT--------A------A-------A-A
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           38038 12 +     46263 TT-T-TT-ATT--------A------A-------A-A
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     31158 12 +     42640 TT-T-TT-ATT--------A------A-------A-A
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        14198 12 +     30600 TT-T-TT-ATT--------A------A-------A-A
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  100661 13 -    120886 TT-T-TTAATC--------A------A-------A-T
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 I 1
s Solenodon_paradoxus.SolPar_flattened_line_1012            19275  5 +    739146 ----------A--------T------C-------A-T
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2240143 12 +   2842873 tt-t-tc-ata--------a------a-------a-t
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             235186  8 -    276980 ----------T-----ATTA------A-------A-T
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            27963  8 +     62062 ----------T-----ATTA------A-------A-T
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189272491 12 + 218635234 ----------t--------t------tttattaaa-a
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        15388 12 -  13920577 TT-T-TT-ATG--------A------A-------A-T
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                 634 12 +     20549 ----------T--------T------TTAATTAAG-T
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               15078  8 +     45698 TT-T-TC-AGT--------------------------
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      807505  8 +   1148477 ----------T-----ATTA------A-------A-T
i Tapirus_indicus.TapInd_scaffold_176                   I 4 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  58216  8 +     99546 ----------T-----ATTA------A-------A-T
i Tapirus_terrestris.TapTer_scaffold_14939              I 4 C 0
s Tarsius_lariang.k141_609102                               26899 10 +     42269 ---T-TT-ATT--------A------A-------A-T
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               60215 10 +     65473 ---T-TT-ATT--------A------A-------A-T
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194008252 12 - 194193292 tt-t-tt-att--------a------a-------a-t
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             39090 12 -     47444 TT-T-AT-ATT--------A------A-------A-C
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  5897 12 +      6782 TT-T-TT-AGT--------A------A-------A-T
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  136453 12 -    259118 ----------T--------T------TTTATTAAG-T
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        27354 12 +     38948 TT-T-TT-ATT--------A------A-------A-A
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   21086 12 -     32910 TT-T-TT-ATT--------A------A-------A-A
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      2472 12 -     12939 TT-T-TT-ATT--------A------A-------A-A
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       2408 12 -     14244 TT-T-TT-ATT--------A------A-------A-A
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           43807 12 -     54611 TT-T-TT-ATT--------A------A-------A-A
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        1610 12 -     11566 TT-T-TT-ATT--------A------A-------A-A
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     3787 12 -     15592 TT-T-TT-ATT--------A------A-------A-A
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          2443 12 +     14371 TT-T-TT-ATT--------A------A-------A-A
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                    724 12 +     12481 TT-T-TT-ATT--------A------A-------A-A
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                         600 12 -     24393 TT-T-TT-ATT--------A------A-------A-A
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       5846 12 -     28054 TT-T-TT-ATT--------A------A-------A-A
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44660646 12 -  44834318 TT-T-TT-ATT--------A------A-------A-A
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       2954 12 +     13828 TT-T-TT-ATT--------A------A-------A-A
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Trichechus_manatus.JH594618.1                          16085353 12 +  31416278 tt-t-tc-att--------a------a-------a-t
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2793295 12 -   3938065 TT-C-AT-ATC--------G------A-------A-T
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    5495 12 +     13056 TT-C-AT-GTC--------G------A-------A-T
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69313805 11 -  96451834 ----------T--------TTCTGTAA-------G-T
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   1702  5 +     10241 ----------T--------T------T-------T-T
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 I 7
s Ursus_maritimus.KK498671.1                              6515196  8 +  28682327 ----------tatt-----a------a-------a-t
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Vicugna_pacos.KN269600.1                                1525053  6 -   2331223 ----------t--------t------a-------act
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                138686  8 -    281493 ----------T-----ATTA------A-------A-T
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Varecia_rubra.k141_432109                                  5698  1 -     20643 -----T-------------------------------
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             25239  1 -     33872 -----T-------------------------------
i Varecia_variegata.k141_775891                         C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       127258 12 -    134049 TT-T-TC-ATA--------A------A-------A-T
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        214669  8 -    227762 ----------T-----ATTA------A-------A-T
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     15583  9 -     20485 -----tt-ttt--------a------a-------a-c
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 I 396
s Ziphius_cavirostris.ZipCav_flattened_line_127025           7304 11 -      8775 ----------T--------TTTTGTAA-------G-T
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                701732 90 +    802869 I
e Sorex_araneus.JH798170.1                               17766452 15 -  27805282 I
e Tragulus_javanicus.TraJav_scaffold_14717                   5555  0 +     90398 C
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Megaderma_lyra.MegLyr_scaffold_3562                       64783 239 -    234502 I
e Elephantulus_edwardii.JH947210.1                        7816099 793 +  15467074 I
e Crocidura_indochinensis.CroInd_scaffold_848148              199  0 +      1327 C
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1008 325 -      5782 I
e Hylobates_klossii.k141_285563                               343 193 +      1026 I
e Microtus_ochrogaster.CM001673.1                        22820341  4 -  98408828 I
e Rattus_norvegicus.chr11                                13915860 1475 +  90463843 I
e Ondatra_zibethicus.OndZib_scaffold_6821                  125594  4 +    145789 I
e Graphiurus_murinus.GraMur_scaffold_4493                   77863  0 +    118900 C
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I
e Ellobius_talpinus.LOJH01090055.1                           7151  4 -      7838 I
e Ellobius_lutescens.LOEQ01003611.1                        240029  1 -    369425 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               12245 29 +    209709 A---T---T--TTC----CAACaatt----aaa-----------gt-gg-tacca---g-a-a
s Acinonyx_jubatus.LLWD01000356.1                         2034374 34 +   3721120 A---T---T--TTA----CAGCAATT----A---GAC-TAG-A-GA-GC-CACCA---A-A-A
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    112952 33 -    189883 A---A---T--TTG----TAGTAATT----ACA---C-AAA-A-GT-GC-ATTAA---G-A--
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10657711 33 +  23371972 a---t---t--tta----cagCAATT----A---GAC-TA--A-GA-GC-CACCA---A-A-A
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7095059 33 -  16596857 a---t---t--tta----tagcaatt----a---GAC-TA--A-GA-GC-AACCA---A-A-A
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   17274 23 -     22067 ATTAAATAT--TTA----TAGTAACT----TCA------------------------------
i Allactaga_bullata.AllBul_scaffold_70162               C 0 I 7
s Allenopithecus_nigroviridis.k141_2469532                   1755 34 -     60446 A---T---T--TTC----CAGCAATT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         2475 34 -     29318 A---T---T--TTC----CAGCAATT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         1410 34 +     38766 A---T---T--TTC----CAGCAATT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          2369 34 -     80423 A---T---T--TTC----CAGCAATT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            10672 34 -     18050 A---T---T--TTC----CAGCAATT----AAA---C-TAT-A-GC-GG-TACCA---G-A-A
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_1710068                                387 34 +      1555 A---T---T--TTC----CATCAATT----AAA---C-TAT-A-GC-GG-TACCA---G-A-A
i Alouatta_caraya.k141_1710068                          C 0 C 0
s Alouatta_discolor.k141_811576                             11345 34 -     21359 A---T---T--TTC----CAGCAATT----AAA---C-TAT-A-GC-GG-TACCA---G-A-A
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                 966 34 +      2129 A---T---T--TTC----CATCAATT----AAA---C-TAT-A-GC-GG-TACCA---G-A-A
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_2177643                           350 34 -      1868 A---T---T--TTC----CATCAATT----AAA---C-TAT-A-GC-GG-TACCA---G-A-A
i Alouatta_macconnelli.k141_2177643                     C 0 C 0
s Alouatta_nigerrima.k141_3537692                             399 34 +      1660 A---T---T--TTC----CATCAATT----AAA---C-TAT-A-GC-GG-TACCA---G-A-A
i Alouatta_nigerrima.k141_3537692                       C 0 C 0
s Alouatta_palliata.k141_2764429                              314 34 -      1480 A---T---T--TTC----CAGCAATT----AAA---C-TAT-A-GC-GG-TACCA---G-A-A
i Alouatta_palliata.k141_2764429                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            4392 34 -      4927 A---T---T--TTC----CATCAATT----AAA---C-TAT-A-GC-GG-TACCA---G-A-A
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_1531728                             529 34 -      1692 A---T---T--TTC----CAGCAATT----AAA---C-TAT-A-GC-GG-TACCA---G-A-A
i Alouatta_seniculus.k141_1531728                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3520514 29 +   4113121 a---t---t--tta----ttgtaatt----A----A---A----GA-GC-CACCA---A-A-A
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      390918 34 -    631301 G---T---T--TTC----TAGCAATT----A---GAC-TAA-A-GA-GC-TACCA---G-A-A
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            31097 29 +     33004 A---T---T--TTA----TTGTAATT----A----A---A----GA-GC-CACCA---A-A-A
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 63024 34 +     78111 A---T---T--TTC----CAGCAATT----ATA---C-TAT-A-GC-AG-CACCA---G-A-A
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            5966 34 +     22701 A---T---T--TTC----CAGCAATT----ATA---C-TAT-A-GC-AG-CACCA---G-A-A
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5749923 34 +   9889416 a---t---t--ttc----cagcAATT----ATA---C-TAT-A-GC-AG-CACCA---G-A-A
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             6512 34 -    104377 A---T---T--TTC----CAGCAATT----ATA---C-TAT-A-GC-GG-CACCA---G-A-A
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               6514 34 +     23246 A---T---T--TTC----CAGCAATT----ATA---C-TAT-A-GC-GG-CACCA---G-A-A
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     4068 34 +      5067 A---T---T--TTA----TAGCAATT----ACA--A--TAA-A-GA-GC-CACAA---G-A-A
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        1446 12 +      9265 --------------------------------------------GA-AC-CACTG---G-A-A
i Arctocebus_calabarensis.k141_587554                   I 13 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 9335 34 -     29036 G---T---T--TTA----TAGCAATT----A---GAC-TAA-A-GA-GC-TACCA---G-A-A
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9539783 34 +  39197703 A---T---T--TTC----CAGCAATT----AAA---C-TAT-A-GC-AG-CACCA---G-A-A
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             61054 34 +     85812 A---T---T--TTC----CAGCAATT----AAA---C-TAT-A-GC-AG-TACCA---G-A-A
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                12067 34 +     89302 A---T---T--TTC----CAGCAATT----AAA---C-TAT-A-GC-AG-TACCA---G-A-A
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             16570 34 -     58268 A---T---T--TTC----CAGCAATT----AAA---C-TAT-A-GC-AG-CACCA---G-A-A
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             64562 34 +    119057 A---T---T--TTC----CAGCAATT----AAA---C-TAT-A-GC-AG-TACCA---G-A-A
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               6533 34 -     25888 A---T---T--TTC----CAGCAATT----AAA---C-TAT-A-GC-AG-TACCA---G-A-A
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 7159 17 -     16375 A---T---C--TTA----AGATAATT----AAA------------------------------
i Avahi_laniger.k141_2840928                            C 0 I 7
s Avahi_peyrierasi.k141_798820                                778 17 +      6337 A---T---C--TTA----AGATAATT----AAA------------------------------
i Avahi_peyrierasi.k141_798820                          C 0 I 7
s Balaenoptera_acutorostrata.KI537095.1                  26380589 14 +  51448160 a---t---t--tta----tagtAATT-------------------------------------
i Balaenoptera_acutorostrata.KI537095.1                 C 0 I 15
s Balaenoptera_bonaerensis.DF502048.1                        5761 14 -     13118 a---t---t--tta----tagTAATT-------------------------------------
i Balaenoptera_bonaerensis.DF502048.1                   C 0 I 15
s Beatragus_hunteri.BeaHun_scaffold_21644                   43584 29 -     72089 A---T---T--TTA----TTGTAATT----A----A---A----GA-GC-CACCA---A-A-A
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6560247 28 +   6870073 a---t---t--tta----ttgtAATT----A----A--------GA-GC-CACCA---A-A-A
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138140356 28 - 161108492 a---t---t--tta----ttgtAATT----A----A--------GA-GC-CACCA---A-A-A
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     572897 28 -    998990 a---t---t--tta----ttgtaATT----A----A--------GA-GC-CACCA---A-A-A
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136296089 28 - 158972876 a---t---t--tta----ttgtaatt----a-----------a-ga-GC-CACCA---A-A-A
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1233168 29 -   1914593 a---t---t--tta----ttgtAATT----A----A---A----GA-GC-CACCA---A-A-A
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               114420 34 -    171031 A---T---T--TTC----CAGCAATT----AAA---C-TAT-A-GC-AG-TACCA---G-A-A
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 13449 34 +    125063 A---T---T--TTC----CAGCAATT----AAA---C-TAT-A-GC-GG-TACCA---G-A-A
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                15492 34 -    216513 A---T---T--TTC----CAGCAATT----AAA---C-TAT-A-GC-AG-TACCA---G-A-A
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        8035 34 -    134917 A---T---T--TTC----CAGCAATT----AAA---C-TAT-A-GC-GG-TACCA---G-A-A
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3219954 34 -   8989139 a---t---t--tta----taataatt----a---gaT-TAA-A-GA-GC-CACCA---G-A-A
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           397655 34 -  15254737 a---t---t--tta----taataatt----a---gaT-TAA-A-GA-GC-CACCA---G-A-A
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2973391 34 +   6889770 a---t---t--tta----taataatt----a---gaT-TAA-A-GA-GC-CACCA---G-A-A
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11519857 33 +  39901454 A---T---T--TTA----TAGCAATT----A---GAC-TA--A-GA-GC-CACCA---A-A-A
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   14882 33 +     87036 A---T---T--TTA----TAGCAATT----A---GAC-TA--A-GA-GC-CACCA---A-A-A
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11266524 33 -  35597290 a---t---t--tta----tagcaatT----A---GAC-TA--A-GA-GC-CACCA---A-A-A
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11089058 33 +  39895921 a---t---t--tta----tagcaatT----A---GAC-TA--A-GA-GC-CACCA---A-A-A
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16456073 33 -  44759192 a---t---t--tta----tagcaatT----A---GAC-TA--A-GA-GC-CACCA---A-A-A
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21325590 28 + 157394656 a---t---t---ta----ttGTAATT----A----A---A----GA-GC-CACCA---A-A-A
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135706818 28 - 157403528 a---t---T---TA----TTGTAATT----A----A---A----GA-GC-CACCA---A-A-A
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          309435 33 +    345090 g---t---t--ttc----taGCAATT----AAA---C-AAA-A-GT-AG-CACCA---G-A--
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               60117 34 +     67245 G---T---T--TTG----TAGAAATT----A---GAC-TAA-A-GA-GC-TACCA---G-A-A
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   31509 34 +     33760 A---T---T--TTG----TAGCAATT----ACA---C-CAA-A-GA-TC-TGTAA---A-A-A
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   159277 14 -    276539 A---T---T--TTA----TAGTAATT-------------------------------------
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 I 15
s Cavia_aperea.AVPZ01000278.1                            15787009 34 -  24422027 A---T---G--TTA----TAGCAATT----AAA--A--T-GTA-GA-GC-TCTTA---G-A-A
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15798945 34 -  24440124 A---T---G--TTA----TAGCAATT----AAA--A--T-GTA-GA-GC-TCTTA---G-A-A
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       177136 34 +    436027 A---T---G--TTA----TAGCAATT----AAA--A--T-GTA-GA-GC-TCTTA---G-A-A
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18891266 34 -  29618158 A---T---T--TTC----CAGCAATT----ATA---C-TAT-A-GC-AG-CACCA---G-A-A
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 8810 34 -     26817 A---T---T--TTC----CAGCAATT----ATA---C-TAT-A-GC-AG-CACCA---G-A-A
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                13053 34 +     25043 A---T---T--TTC----CAGCAATT----ATA---C-TAT-A-GC-AG-CACCA---G-A-A
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         8463 33 +     21754 G---T---T--TTC----CAGCAATT----AAA---C-AAA-A-GT-GG-CACCA---G-A--
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4364271 34 +   7569818 a---t---t--tta----tagcaata----a---GAC-TAA-A-AA-GC-CACCA---A-A-A
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         4028 34 -      9338 A---T---T--TTA----TAGCAATA----A---GAC-TAA-A-AA-GC-CACCA---A-A-A
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6555701 34 +   6739814 a---t---t--ttc----cagcAATT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      27178 34 +     60454 A---T---T--TTC----CAGCAATT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          2384 34 -     21101 A---T---T--TTC----CAGCAATT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         59693 34 -    107033 A---T---T--TTC----CAGCAATT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        2583 34 -     17608 A---T---T--TTC----CAGCAATT----AAA---C-TAA-A-GC-GG-TACCA---G-A-A
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          30079 34 +     30494 A---T---T--TTC----CAGCAATT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          58924 34 -     59240 A---T---T--TTC----CAGCAATT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          2625 34 +     16677 A---T---T--TTC----CAGCAATT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           24784 34 +     35983 A---T---T--TTC----CAGCAATT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11991310 34 +  12117833 A---T---T--TTC----CAGCAATT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46478070 34 +  46592721 A---T---T--TTC----CAGCAATT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      41620 34 -     45581 A---T---T--TTC----CAGCAATT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       2626 34 +     35577 A---T---T--TTC----CAGCAATT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        2401 34 -     25661 A---T---T--TTC----CAGCAATT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        2381 32 -     17744 --------T--TTC----CAGCAATT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        21996 34 +     37128 A---T---T--TTC----CAGCAATT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           3151 34 -      6963 A---C---T--TTA----TAGCATTT----AGA---C-TA--ATGA-GC-CACAA---G-A-A
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           59439 17 -     68416 A---T---C--TTA----AGATAATT----AAA------------------------------
i Cheirogaleus_major.k141_1157592                       C 0 I 7
s Cheirogaleus_medius.k141_133808                            8484 17 +     13308 A---T---C--TTA----AGATAATT----AAA------------------------------
i Cheirogaleus_medius.k141_133808                       C 0 I 7
s Cheracebus_lucifer.k141_619653                             6077 34 -     18223 A---T---T--TTC----CAGCAATT----AAA---C-TTT-A-GC-GG-TACCA---G-A-A
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             23095 34 +     25473 A---T---T--TTC----CAGCAATT----AAA---C-TAT-A-GC-GG-TACCA---G-A-A
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           42135 34 +     57117 A---T---T--TTC----CAGCAATT----AAA---C-TAT-A-GC-GG-TACCA---G-A-A
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          46814 34 +     54541 A---T---T--TTC----CAGCAATT----AAA---C-TAT-A-GC-GG-TACCA---G-A-A
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15962135 34 +  43084221 A---T---T--TCA----TAGCAATT----AAA--A--T-GTA-GA-AC-TTTTA---C-A-A
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         71621 34 +    196370 A---T---T--TTC----CAGCAATT----AAA---C-TAT-A-GC-GG-TACCA---G-A-A
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          15801 34 +     40510 A---T---T--TTC----CAGCAATT----AAA---C-TAT-A-GC-GG-TACCA---G-A-A
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15139516 34 -  15256731 A---T---T--TTC----CAGCAATT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      34597 34 -     53260 A---T---T--TTC----CAGCAATT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101145157 34 + 101219884 a---t---t--ttc----tagcaATT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                16858 30 -     21363 A---T---T--TTG----TATCATTT----ACA---C-TA--A-AA-GC-CACAT--------
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           762161 30 +    964067 a---t---t--tcG----TATCATTT----ACA---C-TA--A-AA-GC-CACAT--------
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10886926 13 +  10971483 a---t---t--ttc----cagCAAT--------------------------------------
i Colobus_angolensis.KN985967.1                         C 0 I 16
s Colobus_guereza.LG08                                  147665091 13 + 156195979 A---T---T--TTC----CAGCAAT--------------------------------------
i Colobus_guereza.LG08                                  C 0 I 16
s Colobus_polykomos.k141_1406057                            17076 13 +     23629 A---T---T--TTC----CAGCAAT--------------------------------------
i Colobus_polykomos.k141_1406057                        C 0 I 16
s Condylura_cristata.JH655880.1                          60613984 34 +  78930452 a---t---t--tta----tagcaatA----G---GAC-T-----AA-AT-GACCACTGG-A-G
i Condylura_cristata.JH655880.1                         I 3 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 278922 33 -    399297 A---T---T--TTG----TGGTAATT----ATA---C--AA-A-GG-CC-TTTAA---G-A-T
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53029607 34 +  72327488 A---T---T--TTG----CAGTTATT----ACA---C-AAA-A-GG-CC-TTTAA---G-A-A
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            52410 34 -     70449 A---T---T--TTA----CAGCAATT----A---GAC-TAA-A-GA-GC-CACCA---A-A-A
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  208595 30 -    956709 A---T---T--TTT----TGACAAAT----A-------TCC-C-AA-GC--CACC---G-A-A
i Ctenodactylus_gundi.CteGun_scaffold_447               I 1 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 31051 35 -     67205 A---T---TT-TTA----TAGTAATT----CAA--A--T-GTA-GT-GT-TCTTG---G-A-G
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                18171 34 +     26546 A---G---T--TTG----TAGCAATT----AAA--A--T-GTA-GA-GC-TCTTA---G-A-G
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             59259 34 -    236241 A---T---T--TTC----TAGCAATT----AAa---a-tgt-a-ga-gc-tctta---g-a-a
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          184035 34 -   6883506 A---T---T--TTA----TAGCACTT----AGA---C-CA--ATGA-GT-CACAA---G-A-A
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16845296 34 +  31942871 A---T---C--TTA----AAATAATT----AAA---C--CG-TTGA-AC-CACCA---G-A-A
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80037213 14 -  96802777 a---t---t--tta----tAGTAATT-------------------------------------
i Delphinapterus_leucas.KZ290064.1                      C 0 I 15
s Desmodus_rotundus.KZ672188.1                           18699396 34 -  18957592 G---T---T--TTG----TAGCAATT----A---GAG-GAA-A-GA-GC-TACCA---G-A-A
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 322924 34 +    993696 a---t---t--tta----tagcaatT----A---GAC-TAA-A-AA-GC-CACCC---A-A-A
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   3575 34 +    151128 A---T---T--TTA----CAGCAATA----A---GAC-TAA-A-AA-GC-CACCA---A-A-A
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   157399 34 +    228994 A---T---T--TTA----TAGCAATT----AAA--AG-GTG---CA-GC-TTTTA---G-A-A
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3656708 34 +   4240102 a---t---t--tta----taacaagT----TTG---C-CAA-A-AA-GC-CATTA---G-A-A
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 28351 34 +     28912 A---T---T--TTA----TAACAAGT----TTG---C-CAA-A-AA-GC-CATTA---G-A-A
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                36483 34 -     73477 A---T---G--TTA----TAGCAATT----AAA--A--T-GTA-AA-GC-TCTTA---G-A-G
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22998965 29 -  44670279 C---T---C--TTA----TGATAATT----A---GA--------AA-GC-TAAAA---G-A-A
i Echinops_telfairi.JH980316.1                          I 3 C 0
s Eidolon_helvum.KE772537.1                                 12644 34 +     24177 G---T---T--TTG----TAGCAATC----A---GAC-TAA-A-GA-GC-CACTA---G-A-A
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1491860 29 +   1727528 A---T---T--TTA----TTGCAATT----A----A---A----GA-GC-CACCA---A-A-A
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Enhydra_lutris.KZ291749.1                              85872584 34 +  99434291 a---t---t--tta----tagcaatT----A---GAC-TA--A-GA-GC-TACCA---A-AAA
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4704966 34 +   6522550 a---t---t--ttg----tagAAACT----A---GAC-TAA-A-GA-GC-CACTA---G-A-A
i Eptesicus_fuscus.JH977687.1                           I 408 C 0
s Equus_asinus.JREZ01000062.1                             5853372 34 -   7175178 a---t---t--tta----cagcAATT----A---GAC-TAG-A-GA-GG-CATCA---A-A-A
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13351877 34 +  41866177 a---t---t--tta----cagcaATT----A---GAC-TAG-A-GA-GG-CATCA---A-A-A
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          13366 34 +     92910 a---t---t--tta----cagcaaTT----A---GAC-TAG-A-GA-GG-CATCA---A-A-A
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11534643 38 +  16010500 A---T---T--AAATATTTAGTAATTA-CTG---AAT-TA--ATAT-AC-CACCA--------
i Erinaceus_europaeus.JH835290.1                        C 0 I 1
s Erythrocebus_patas.Contig8                             48774284 34 -  48907691 A---T---T--TTC----CAGCAATT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          315429 14 +    330699 A---T---T--TTA----TAGTAATT-------------------------------------
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 I 15
s Eubalaena_japonica.EubJap_flattened_line_7756             61882 14 +     89355 A---T---T--TTA----TAGTAATT-------------------------------------
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 I 15
s Eulemur_albifrons.k141_715837                              5487 11 +     13586 ------------------AGATAATT----AAA------------------------------
i Eulemur_albifrons.k141_715837                         C 0 I 7
s Eulemur_collaris.k141_311830                               5418 11 -      6809 ------------------AGATAATT----AAA------------------------------
i Eulemur_collaris.k141_311830                          C 0 I 7
s Eulemur_coronatus.k141_3240342                            11895 11 +     36558 ------------------AGATAATT----AAA------------------------------
i Eulemur_coronatus.k141_3240342                        C 0 I 7
s Eulemur_flavifrons.k141_903901                             8216 11 +     60246 ------------------AGATAATT----AAA------------------------------
i Eulemur_flavifrons.k141_903901                        C 0 I 7
s Eulemur_fulvus.k141_653297                                11692 11 +    109717 ------------------AGATAATT----AAA------------------------------
i Eulemur_fulvus.k141_653297                            C 0 I 7
s Eulemur_macaco.k141_1341545                               16078 11 +     16540 ------------------AGATAATT----AAA------------------------------
i Eulemur_macaco.k141_1341545                           C 0 I 7
s Eulemur_mongoz.k141_825972                                16353 11 +     27497 ------------------AGATAATT----AAA------------------------------
i Eulemur_mongoz.k141_825972                            C 0 I 7
s Eulemur_rubriventer.k141_411740                           18810 11 +     26808 ------------------AGATAATT----AAA------------------------------
i Eulemur_rubriventer.k141_411740                       C 0 I 7
s Eulemur_rufus.k141_1620292                                33548 11 +     46535 ------------------AGATAATT----AAA------------------------------
i Eulemur_rufus.k141_1620292                            C 0 I 7
s Eulemur_sanfordi.k141_186399                              16272 11 -     29447 ------------------AGATAATT----AAA------------------------------
i Eulemur_sanfordi.k141_186399                          C 0 I 7
s Felis_catus.CM001386.2                                129893329 34 - 159252932 A---T---T--TTA----CAGCAATT----A---GAC-TAG-A-GA-GC-CACCA---A-A-A
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129280421 34 - 158578461 A---T---T--TTA----CAGCAATT----A---GAC-TAG-A-GA-GC-CACCA---A-A-A
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 21561 34 +     52776 A---T---T--TTA----CAGCAATT----A---GAC-TAG-A-GA-GC-CACCA---A-A-A
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Galago_moholi.ctg555                                     211327 30 -    847004 A---T---C--TTC----AAAC--------AAA---C-CAC-T-GA-GC-CACTG---G-A-A
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           13701 30 -     43889 A---T---C--TTC----AAAC--------AAA---C-CAC-T-GA-GC-CACTG---G-A-A
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          10775 30 +     27357 A---T---C--TTA----AAAC--------AAA---C-CAT-T-GA-GC-CACTG---G-A-A
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               156690 34 +    324696 G---T---T--TTA----TAGTAATT----GGA---C-CAA-A-AA-GC-CACCA---G-A-G
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    181659 29 -    189561 a---t---t--tta----ttgtaatt----a---------a-a-GA-GC-CAGAA---G-A-A
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           13459 34 -     18683 A---A---A--TTA----TGGCAATG----ACA-G-C--AA-A-GA-AC-TCAAA---GAT--
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               5758 34 -     14630 A---T---T--TTC----CAGCAATT----AAG---C-TAA-A-GT-GG-TACCA---G-A-A
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119652858 34 - 195582420 a---t---t--ttc----cagcAATT----AAG---C-TAA-A-GT-GG-TACCA---G-A-A
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         2264 11 +     10286 ------------------AGATAATT----AAA------------------------------
i Hapalemur_alaotrensis.k141_1280836                    C 0 I 7
s Hapalemur_gilberti.k141_279011                              741 11 -     11661 ------------------AGATAATT----AAA------------------------------
i Hapalemur_gilberti.k141_279011                        C 0 I 7
s Hapalemur_griseus.k141_1387522                             6070 11 +     56096 ------------------AGATAATT----AAA------------------------------
i Hapalemur_griseus.k141_1387522                        C 0 I 7
s Hapalemur_meridionalis.k141_186231                        29321 11 -     42470 ------------------AGATAATT----AAA------------------------------
i Hapalemur_meridionalis.k141_186231                    C 0 I 7
s Hapalemur_occidentalis.k141_797938                        45944 11 -     54384 ------------------AGATAATT----AAA------------------------------
i Hapalemur_occidentalis.k141_797938                    C 0 I 7
s Helogale_parvula.HelPar_flattened_line_22962              17616 34 +     53719 A---T---T--TTA----TAGCAATT----A---GAC-TAA-A-GA-GC-CACCA---A-A-A
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                27874 29 -     91191 A---T---T--TTA----TTGTAATT----A----A---A----GA-GC-CACCA---A-A-A
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2551490 34 +  31725842 a---t---t--tta----tagcaatT----AAA--A--T-GTA-GA-GC-TATGA---G-A-A
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               61310 34 +     73687 A---T---T--TTA----TAATATGT----AGA---C-CAA-A-AA-GT-CACAA---G-A-A
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              147515 34 +    277961 A---T---T--TTA----TGGTGATTAGATG----A---A--A-GA-GC-CACCA---A-A-A
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      278784 33 -    477199 ----t---t--ttg----tatcaaTT----A---GAC-TAA-A-GA-AC-CACCA---G-A-A
i Hipposideros_armiger.JXIK01001085.1                   I 6 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              7930 33 -      9143 ----T---T--TCG----TATCAGTT----A---GAC-TAA-A-GA-AC-CACCA---G-A-A
i Hipposideros_galeritus.HipGal_scaffold_104691         I 6 C 0
s Hoolock_leuconedys.ctg79                                      5445 34 -   7690867 A---T---T--TTC----CAGCAATT----AAA---C-TAA-A-GG-GG-TACCA---G-G-A
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 17685 35 -     67322 A---T---TT-TTA----CAGTAATT----A---GAC-TAA-A-GA-GC-CACCA---A-A-A
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19390 34 -    119109 A---T---A--TTA----TAGCAATT----AAa---a-tat-a-ga-gc-tctta---g-a-a
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_164775                               249 34 -      2073 A---T---T--TTC----CAGCAATT----AAA---C-TAA-A-GG-GG-TACCA---G-G-A
i Hylobates_abbotti.k141_164775                         C 0 C 0
s Hylobates_agilis.k141_1878600                               486 34 -      1230 A---T---T--TTC----CAGCAATT----AAA---C-TAA-A-GG-GG-TACCA---G-G-A
i Hylobates_agilis.k141_1878600                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14625139 34 -  25970782 A---T---T--TTC----CAGCAATT----AAA---C-TAA-A-GG-GG-TACCA---G-G-A
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            2395 34 -      2977 A---T---T--TTC----CAGCAATT----AAA---C-TAA-A-GG-GG-TACCA---G-G-A
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             34298 34 -     60944 A---T---T--TTC----CAGCAATT----AAA---C-TAA-A-GG-GG-TACCA---G-G-A
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     6560 34 +     22540 A---T---T--TTA----TAGCAATT----AAA--AC--AT-A-GA-CC-TACAA---A-A-A
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7126239 34 +  13083262 a---t---t--tta----tagtaatt----atg---T-TAA-A-GT-GC-CACAG---G-A-A
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_5141390                                    792 17 -      3181 A---T---C--TTA----AGATAATT----AAA------------------------------
i Indri_indri.k141_5141390                              C 0 I 7
s Inia_geoffrensis.IniGeo_flattened_line_66725               9418 14 +     17520 A---T---T--TTA----TAGTAATT-------------------------------------
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 I 15
s Jaculus_jaculus.JH725517.1                              8566288 23 +  11848649 attaaatat--tta----tagtaaCT----TCA------------------------------
i Jaculus_jaculus.JH725517.1                            C 0 I 7
s Kogia_breviceps.KogBre_flattened_line_35920               24030 14 +     37189 A---T---T--TCA----TAGTAATT-------------------------------------
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 I 15
s Lagothrix_lagothricha.k141_12968                          50652 34 -    147782 A---T---T--TTC----CAGCAATT----AAA---C-TAT-A-GC-GG-TACCA---G-A-A
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                     722 34 +     26176 a---t---t--ttg----taGTAACT----A---GAC-TAA-A-GA-GC-CACTA---G-A-A
i Lasiurus_borealis.LasBor_scaffold_59542               I 498 C 0
s Lemur_catta.scaffold_1                                258407625 11 - 285822530 ------------------AGATAATT----AAA------------------------------
i Lemur_catta.scaffold_1                                C 0 I 7
s Lepilemur_ankaranensis.k141_884009                        24377 17 +     39228 A---T---C--TTA----AGATAATT----AAA------------------------------
i Lepilemur_ankaranensis.k141_884009                    C 0 I 7
s Lepilemur_dorsalis.k141_134267                            53761 17 +     63517 A---C---C--TTA----AGATAATT----AAA------------------------------
i Lepilemur_dorsalis.k141_134267                        C 0 I 7
s Lepilemur_ruficaudatus.k141_617879                        79025 17 +    116806 A---T---C--TTA----AGATAATT----AAA------------------------------
i Lepilemur_ruficaudatus.k141_617879                    C 0 I 7
s Lepilemur_septentrionalis.k141_578524                     32016 17 -     33031 A---T---C--TTA----AGATAATT----AAA------------------------------
i Lepilemur_septentrionalis.k141_578524                 C 0 I 7
s Leptonychotes_weddellii.KB714749.1                      3086377 33 -   3498232 a---t---t--tta----tagcaatt----A---GAC-TA--A-GA-GC-CACca---a-a-a
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    13659 34 +     22452 A---T---T--TTA----TAGCAATT----AGA---C-CAA-A-GA-GCCACA-A---G-A-G
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            136374 14 +   3060487 a---t---T--TTA----TAGTAATT-------------------------------------
i Lipotes_vexillifer.KE558548.1                         C 0 I 15
s Lophocebus_aterrimus.ctg55                             19248795 34 +  19376315 A---T---T--TTC----CAGCAATT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           11076 30 +     84689 A---T---C--TTA----AAAC--------AAA---C-CAC-T-TA-GC-CACTG---T-A-A
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3778825 30 +   6799190 A---T---C--TTA----AAAC--------AAA---C-CAC-T-TA-GC-CACTG---T-A-A
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20594690 34 -  62548349 a---t---t--tta----taataatt----agt--TC--AG-A-GA-GC-CACAA---G-A-A
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11088514 33 +  39895028 a---t---t--tta----tagcaatt----a---GAC-TA--A-GA-GC-CACCA---A-A-A
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             20530 34 +     74745 A---T---T--TTC----CAGCAATT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12706987 34 +  12821369 A---T---T--TTC----CAGCAATT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                2629 34 -      3136 A---T---T--TTC----CAGCAATT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           47447 33 +     63263 A---T---T--TTC----CAGCAATT----AAA---C--AG-AAGT-GG-TACCA---G-A--
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                 2152 34 -      2568 A---T---T--TTC----CAGCAATT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 2737 34 -      7381 A---T---T--TTC----CAGCAATT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  45954 34 -     79256 A---T---T--TTC----CAGCAATT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196036061 34 + 196197964 a---t---t--ttc----cagcAATT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11446231 34 +  11645122 a---t---t--ttc----cagcAATT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   4901 34 -     46448 A---T---T--TTC----CAGCAATT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                2575 34 -     13212 A---T---T--TTC----CAGCAATT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 16254 34 -     55006 A---T---T--TTC----CAGCAATT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43841370 34 +  43892939 A---T---T--TTC----CAGCAATT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               17540 34 -     24607 A---T---T--TTC----CAGCAATT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               4906 34 -     27140 A---T---T--TTC----CAGCAATT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43437955 34 -  43563597 A---T---T--TTC----CAGCAATT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4450775 34 -   4543643 A---T---T--TTC----CAGCAATT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            146456 34 +    252755 a---t---t--tta----tagcaatT----A---GAC-TAA-A-GA-GT-CACCC---A-A-A
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             36599 34 +     58827 a---t---t--tta----tagcaatT----A---GAC-TAA-A-GA-GT-CACCC---A-A-A
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36874063 34 +  64221397 a---t---t--tta----tagtaatt----atG---T-TAA-A-GT-GC-CACAA---G-A-A
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             1396 34 -     87323 A---T---T--TTA----TAGCAATT----A---GAC-TA--A-GA-GC-TACCA---A-AAA
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               13326 31 +     15977 A---T---T--TTG----TAGCAATT----ACA---C-AAA-A-AG-CC-TTTAA--------
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 I 3
s Mesocricetus_auratus.KB708139.1                         1047293 34 -  26018355 a---t---t--ttg----tGGTAATT----ACA---C-AAA-A-TG-CC-TTTAA---G-A-T
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_227248                    702 14 -      1377 A---T---T--TTA----TAGTAATT-------------------------------------
i Mesoplodon_bidens.MesBid_scaffold_227248              C 0 I 15
s Microcebus_murinus.CM007691.1                          16510651 17 +  47401472 a---t---c--tta----agATAATT----AAA------------------------------
i Microcebus_murinus.CM007691.1                         C 0 I 7
s Microgale_talazaci.MicTal_scaffold_34660                  34976 29 -     48017 A---T---T--TTG----TGATAATT----A---GA--------AA-GC-TACAA---G-A-G
i Microgale_talazaci.MicTal_scaffold_34660              I 3 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               23308 34 -     32043 G---T---T--TTG----TAGCAATT----A---GAC-TAA-A-GA-GC-TACCA---G-A-A
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8210464 34 +  10048721 a---t---t--ttg----tAGCAACT----A---GAC-CAA-A-GA-AC-CACCA---G-A-G
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            34953 34 +     45743 A---T---T--TTG----TAGCAACT----A---GAC-CAA-A-GA-AC-CACCA---G-A-A
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         2504 34 +     29742 A---T---T--TTC----CAGCAATT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        11893 33 -    104932 A---T---T--TTA----TAGCAATT----A---GAC-TA--A-GA-GC-CACCA---A-A-A
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     6039 17 +      8497 A---T---T--TTA----AGATAATT----AAA------------------------------
i Mirza_zaza.k141_226143                                C 0 I 7
s Monodon_monoceros.MonMon_M_scaffold_5598                 146803 14 +    154973 A---T---T--TTA----TAGTAATT-------------------------------------
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 I 15
s Mormoops_blainvillei.MorMeg_scaffold_2952                161826 34 +    265003 G---T---T--TCG----TAGTGATT----A---GAC-TAA-A-GA-AC-TACCA---G-A-A
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  1890 29 -     19904 A---T---T--TTA----TTGTAGTT----A----A---A----CA-GC-CACCA---A-A-A
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  145311 34 -    168139 A---T---T--TTA----TAGCAATT----A---GAC-TAA-A-GA-GC-CACCA---A-A-A
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          19928 34 -    100666 A---T---T--TTA----CAGCAACT----A---GAC-TAA-A-GA-GC-CACTG---G-G-A
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70766926 35 +  92629107 a---t---t--ttg----tGGCAATT----ACA-TA---AA-A-GGACC-TTTAA---G-A-A
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75489986 35 +  98207768 A---T---T--TTG----TGGCAATT----ACA-TA---AA-A-GGACC-TTTAA---G-A-A
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67556224 35 +  89017189 A---T---T--TTG----TGGCAATG----ACA-TA---AA-A-GGACC-TTtaa---g-a-a
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74331161 35 +  97876770 A---T---T--TTG----TGGCAATT----ACA-TA---AA-A-GGACC-TTTAA---G-A-A
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             12213 33 +     98495 A---T---T--TTA----TGGCAATG----ATA-G---TAA-A-GA-AC-TCAAA---G-T--
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4424765 34 -  28371801 a---t---t--tta----tagcaatT----A---GAC-TA--A-GA-GC-TACCA---A-AAA
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     90351 25 -    117718 ---------------------TAATT----CAA--A--T-GTA-GT-CT-TCTTA---G-A-G
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 9 C 0
s Myotis_brandtii.KE161952.1                               968239 34 +   8389877 a---t---t--ttg----taGCAACT----A---GAC-TAA-A-GA-GC-CACTA---G-A-A
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5019912 34 +   6462685 a---t---t--ttg----taGCAACT----A---GAC-TAA-A-GA-TC-CACTA---G-A-A
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3465821 34 -   3747815 a---t---t--ttg----taGCAACT----A---GAC-TAA-A-GA-GC-CACTA---G-A-A
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        11031 34 +     66751 A---T---T--TTG----TAGCAACT----A---GAC-TAA-A-GA-TC-CACTA---G-A-A
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             5421 34 -      8794 G---T---T--TTA----AATCATTT----ACA---C-TAG-T-AA-GC-CAAAA---G-A-A
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            119074 14 +    362372 A---C---T--tta----cagtaatt-------------------------------------
i Nannospalax_galili.KL201303.1                         C 0 I 59
s Nasalis_larvatus.k141_153429                               9011 34 +     48152 A---T---T--TTC----CAGCAATT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4485283 33 -  14209539 a---t---t--tta----tagcaatT----A---GAC-TA--A-GA-GC-CACca---a-a-a
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3951415 14 -   4490290 a---t---T--TGA----CAGTAATT-------------------------------------
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 I 15
s Nomascus_annamensis.k141_720788                             393 34 -      1065 A---T---T--TTC----CAGCAATT----AAA---C-TAA-A-GG-GG-TACCA---G-G-A
i Nomascus_annamensis.k141_720788                       C 0 I 22
s Nomascus_concolor.k141_226614                              1697 34 -      5092 A---T---T--TTC----CAGCAATT----AAA---C-TAA-A-GG-GG-TACCA---G-G-A
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_1004198                            264 34 +      1448 A---T---T--TTC----CAGAAATT----AAA---C-TAA-A-GG-GG-TACCA---G-G-A
i Nomascus_gabriellae.k141_1004198                      C 0 C 0
s Nomascus_siki_b.tarseq_80                             25415 34 -  18771707 A---T---T--TTC----CAGCAATT----AAA---C-TAA-A-GG-GG-TACCA---G-G-A
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  3118 34 +      4512 A---T---T--TTC----CAGCAATT----AAA---C-TAA-A-GG-GG-TACCA---G-G-A
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                31314 33 +   3668941 a---t---t--tta----tagcaatt----a---GAC-TA--A-GA-GC-CACCA---A-A-A
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65567520 30 -  95554990 A---T---C--TTA----AAAC--------AAA---C-CAC-T-GA-GC-CACTG---T-A-A
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            4246 30 +      6470 A---T---C--TTA----AAAC--------AAA---C-CAC-T-GA-GC-CACTG---T-A-A
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65669855 30 +  89412551 A---T---C--TTA----AAAC--------AAA---C-CAC-T-GA-GC-CACTG---T-A-A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4996408 32 -  23139505 C---T---T--TTA----TAACAATT----AGATGA---A--A-TT-G--ACA-A---A-A-C
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3685883 25 +  10294119 ---------------------TAGTT----CAA--A--T-GTA-GT-GT-TCTTG---C-G-G
i Octodon_degus.JH651621.1                              I 1 C 0
s Odobenus_rosmarus.KB229369.1                             679950 33 -   3126709 a---t---t--tta----tagcaatT----A---GAC-TA--A-GA-GT-CACCA---A-A-A
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1080090 29 +   1425656 A---T---T--TTA----TTGTAATT----A----A---A----GA-GC-CAAAA---A-A-A
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         37387 29 +     78940 a---t---t--tta----ttataatt----a---------a-a-ga-gC-CAGAA---A-A-A
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  37484 35 +     62360 A---T---TT-TTC----TGGTGATT----ACA---C-AAA-A-GG-CC-TTTAA---G-A-A
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7225100 14 -   7562323 a---t---T--TTA----TAGTAATT-------------------------------------
i Orcinus_orca.KB316965.1                               C 0 I 15
s Orycteropus_afer.OryAfe_flattened_line_13509              57984 34 -     66828 A---T---T--GTG----TAATAATT----AGA--TC--AG-A-GA-GC-CACAA---G-A-T
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141876693 34 + 163896628 a---t---t--tta----tagcaatT----AGA---C-CAA-A-GA-GCCACA-A---G-A-G
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      308598 33 -    505867 a---t---t--tta----tagcaatt----a---GAC-TA--A-GA-GC-CACCA---A-A-A
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        1145 30 -     53940 A---T---C--TTA----AAAC--------AAA---C-CAC-T-GA-GC-CACTG---G-A-A
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18009125 30 -  38779656 A---T---C--TTA----AAAC--------AAA---C-CAC-T-GA-GC-CACTG---G-A-A
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134077665 29 - 275406953 a---t---t--tta----ttgtAATT----A----A---A----GA-GC-CACCA---A-A-A
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      78880 29 +    140051 A---T---T--TTA----TTGTAATT----A----A---A----GA-GC-CACCA---A-A-A
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127575124 34 - 205426864 a---t---t--ttc----cagcAATT----AAG---C-TAA-A-GT-GG-TACCA---G-A-A
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120152278 34 - 196562556 a---t---t--ttc----cagcAATT----AAG---C-TAA-A-GT-GG-TACCA---G-A-A
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  34726 15 +    295523 A---T---T--TTA----CAGCAATT----A--------------------------------
i Panthera_onca.PanOnc_flattened_line_1615              C 0 I 7
s Panthera_pardus.KV860323.1                              3638460 15 +  18214204 A---T---T--TTA----CAGCAATT----A--------------------------------
i Panthera_pardus.KV860323.1                            C 0 I 7
s Panthera_tigris.KE721879.1                              5028135 15 -   6340057 A---T---T--TTA----CAGCAATT----A--------------------------------
i Panthera_tigris.KE721879.1                            C 0 I 7
s Pantholops_hodgsonii.KE114631.1                         1066515 29 -   1292953 a---t---t--tta----ttgtAATT----A----A---A----GA-GC-CACCA---A-A-C
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188156742 34 - 188283584 a---t---t--ttc----cagcAATT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             5059 34 +      5367 A---T---T--TTC----CAGCAATT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47514127 34 +  47705337 A---T---T--TTC----CAGCAATT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 68103 34 -    104429 A---T---T--TTC----CAGCAATT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    6639 34 +     14967 A---T---T--TTC----CAGCAATT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 2498 34 -      7628 A---T---T--TTC----CAGCAATT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    116188 36 -    135482 A---T---TTTTTT----CAGCAGTT----A---GAC-TAA-A-AA-GC-CACCA---A-A-A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           5834 30 -     23713 A---T---C--TTA----AAAC--------AAA---C-CAT-T-GG-GC-CACTG---G-A-A
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            25147 30 -     27972 A---T---C--TTA----AAAC--------AAA---C-CAT-T-GG-GC-CACTG---G-A-A
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359        227 33 +     49596 A---T---T--TCA----TAGCAATT----TCA---C-CA--A-AA-GC-CATAA---G-A-G
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4950732 35 -   8017169 A---T---TT-TTG----TGGTAATT----ACA---C-AAA-A-GG-CC-TTTAA---G-A-A
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    13306 34 -     36578 A---T---T--TTA----TAACAATT----GAT--AC--AT-A-GA-GC-TGTGa---g-t-g
i Petromus_typicus.PetTyp_scaffold_33007                C 0 I 7
s Phocoena_phocoena.PhoPho_flattened_line_11948            121705 14 -    122454 A---T---T--TGA----CAGTAATT-------------------------------------
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 I 15
s Piliocolobus_badius.k141_1987485                           2525 34 -      5908 T---T---T--TTC----CAGCAATT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       3149 34 -     17985 T---T---T--TTC----CAGCAATT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            2516 34 +      7694 T---T---T--TTC----CAGCAATT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26740994 34 +  26888534 t---t---t--ttc----cagCAATT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            98311 34 +    112873 a---t---t--ttg----taGAAACT----A---GAC-TAA-A-GA-GC-CACTA---G-A-A
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        I 455 C 0
s Pithecia_albicans.k141_991845                             44258 34 -     61926 A---T---T--TTC----CAGCAATT----AAA---C-TAT-A-GC-GG-TACCA---G-A-A
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        25643 34 +     78826 A---T---T--TTC----CAGCAATT----AAA---C-TAT-A-GC-GG-TACCA---G-A-A
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              9690 34 -     15800 A---T---T--TTC----CAGCAATT----AAA---C-TAT-A-GC-AG-TACCA---G-A-A
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        12889 34 -     16101 A---T---T--TTC----CAGCAATT----AAA---C-TAT-A-GC-AG-TACCA---G-A-A
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          6117 34 +      9673 A---T---T--TTC----CAGCAATT----AAA---C-TAT-A-GC-AG-TACCA---G-A-A
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13475117 34 -  19735023 A---T---T--TTC----CAGCAATT----AAA---C-TAT-A-GC-GG-TACCA---G-A-A
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           14020 34 -     31692 A---T---T--TTC----CAGCAATT----AAA---C-TAT-A-GC-GG-TACCA---G-A-A
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           5791 14 +     21690 A---T---T--TTA----TAGTAATT-------------------------------------
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 I 15
s Plecturocebus_bernhardi.k141_959214                       23360 34 +     44506 A---T---T--TTC----CAGCAATT----AAA---C-TAT-A-GT-GG-TACCA---G-A-A
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        23572 34 +     67491 A---T---T--TTC----CAGCAATT----AAA---C-TAT-A-GT-GG-TACCA---G-A-A
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      13812 34 -     98129 A---T---T--TTC----CAGAAATT----AAA---C-TAT-A-GT-GG-TACCA---G-A-A
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     23412 34 +    147771 A---T---T--TTC----CAGCAATT----AAA---C-TAT-A-GT-GG-TACCA---G-A-A
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        23669 34 -     23762 A---T---T--TTC----CAGCAATT----AAA---C-TAT-A-GT-GG-TACCA---G-A-A
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          4131 34 -     55515 A---T---T--TTC----CAGCAATT----AAA---C-TAT-A-GT-GG-TACCA---G-A-A
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         23485 34 +    152463 A---T---T--TTC----CAGCAATT----AAA---C-TAT-A-GT-GG-TACCA---G-A-A
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       1202 34 -    119457 A---T---T--TTC----CAGCAATT----AAA---C-TAT-A-GT-GG-TACCA---G-A-A
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         13208 34 +    134592 A---T---T--TTC----CAGCAATT----AAA---C-TAT-A-GT-GG-TACCA---G-A-A
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          23795 34 -     75465 A---T---T--TTC----CAGCAATT----AAA---C-TAT-A-GT-GG-TACCA---G-A-A
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              187644 34 -    373494 a---t---t--ttc----cagcAATT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19808292 34 +  19899266 A---T---T--TTC----CAGCAATT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               6255 34 -     15069 A---T---T--TTC----CAGCAATT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              6385 34 +     14865 A---T---T--TTC----CAGCAATT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                2417 34 -      9567 A---T---T--TTA----TAATATGT----AGA---C-CAA-A-AA-GT-CACAA---G-A-A
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     19171  6 -     30946 ----------------------------------------------------nnn---n-n-n
i Propithecus_coquerelli.NW_012147863.1                 I 18 C 0
s Prolemur_simus.MPIZ01000048.1                           6849002 11 +  12164890 ------------------AGATAATT----AAA------------------------------
i Prolemur_simus.MPIZ01000048.1                         C 0 I 7
s Propithecus_coronatus.k141_1353159                         4074 17 +     11805 A---T---C--TTA----AGATAATT----AAA------------------------------
i Propithecus_coronatus.k141_1353159                    C 0 I 7
s Propithecus_diadema.k141_577245                           43417 17 +     52369 A---T---C--TTA----AGATAATT----AAA------------------------------
i Propithecus_diadema.k141_577245                       C 0 I 7
s Propithecus_edwardsi.k141_1317105                         35804 17 -     44753 A---T---C--TTA----AGATAATT----AAA------------------------------
i Propithecus_edwardsi.k141_1317105                     C 0 I 7
s Propithecus_perrieri.k141_7554                            17728 17 +     27322 A---T---C--TTA----AGATAATT----AAA------------------------------
i Propithecus_perrieri.k141_7554                        C 0 I 7
s Propithecus_tattersalli.k141_907138                       17364 17 -     53241 A---T---C--TTA----AGATAATT----AAA------------------------------
i Propithecus_tattersalli.k141_907138                   C 0 I 7
s Propithecus_verreauxi.k141_158021                         39628 17 -     48185 A---T---C--TTA----AGATAATT----AAA------------------------------
i Propithecus_verreauxi.k141_158021                     C 0 I 7
s Psammomys_obesus.NESX01026517.1                           35610 31 +     77221 A---T---T--TTG----TATCAATT----ACA---C-AAA-A-AG-CC-TTTAA--------
i Psammomys_obesus.NESX01026517.1                       C 0 I 2
s Pteronotus_parnellii.KE867983.1                            4466 34 -     27784 G---T---C--TCA----TAGCAATT----A---GAC-TAA-A-GA-AC-TACCA---G-A-A
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        247075 34 -    344369 A---T---T--TTA----TAGCAATT----A---GAC-TA--A-GA-GC-TACCA---A-AAA
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13246381 34 -  17261082 G---T---T--TTG----TAGCAATC----A---AAC-TAA-A-GA-GC-CACTA---G-A-A
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             604332 34 -   3946241 G---T---T--TTG----TAGCAATC----A---AAC-TAA-A-GA-GC-CACTA---G-A-A
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131534713 34 - 161321710 A---T---T--TTA----CAGCAATT----A---GAC-TAG-A-GA-GC-CACCA---A-A-A
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             30376 34 +     56732 A---T---T--TTC----CAGCAATT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6806864 34 +   6970761 A---T---T--TTC----CAGCAATT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             6255 34 +     18040 A---T---T--TTC----CAGCAATT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                16187 29 +     68503 A---T---T--TTA----TTGTAATT----A----A---A----GA-GC-CAAAA---A-A-A
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1788208 33 +   2252614 ----t---t--ttg----tagcAATT----A---GAC-TAA-A-GA-GC-CACCA---G-A-A
i Rhinolophus_sinicus.LVEH01000179.1                    I 6 C 0
s Rhinopithecus_bieti.k119_554384                             665 34 -     17045 A---T---T--TTC----CAGCAATT----AAA---C-GAA-A-GT-GG-TACCA---G-A-A
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206378142 34 - 206558726 a---t---t--ttc----caGCAATT----AAA---C-GAA-A-GT-GG-TACCa---g-a-a
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44857056 34 -  45163003 A---T---T--TTC----CAGCAATT----AAA---C-GAA-A-GT-GG-TACCA---G-A-A
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                19714 34 +    109198 G---T---T--CTG----TAGCAATT----A---GAC-TAA-A-GA-GC-CACCA---G-A-A
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       8341 29 +     12214 A---T---T--TTA----TTATAATT----A----A---A----GA-GC-CACCA---A-A-A
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15673222 34 -  43202129 A---T---T--TTC----CAGCAATT----ATA---C-TAT-A-GT-GG-CACCA---G-A-A
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        5135 34 +     34089 A---T---T--TTC----CAGCAATT----ATA---C-TAT-A-GT-GG-CACCA---G-A-A
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              5077 34 -     60842 A---T---T--TTC----CAGCAATT----ATA---C-TAT-A-GT-GG-CACCA---G-A-A
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              5170 34 +     67014 A---T---T--TTC----CAGCAATT----ATA---C-TAT-A-GT-GG-CACCA---G-A-A
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              5148 34 +     60816 A---T---T--TTC----CAGCAATT----ATA---C-TAT-A-GT-GG-CACCA---G-A-A
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 5085 34 -     76454 A---T---T--TTC----CAGCAATT----ATA---C-TAT-A-GT-GG-CACCA---G-A-A
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17341810 34 -  30362882 A---T---T--TTC----CAGCAATT----ATA---C-TAT-A-GC-AG-CACCA---G-A-A
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         21171 34 -     62485 A---T---T--TTC----CAGCAATT----ATA---C-TAT-A-GC-AG-CACCA---G-A-A
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   32671 34 -    114521 T---T---T--TTA----TAGCAATC----A---GAC-T-----AA-AT-AACCACCAA-A-A
i Scalopus_aquaticus.ScaAqu_scaffold_9300               I 3 C 0
s Semnopithecus_entellus.k141_1572367                        3868 34 +     15331 A---T---T--TTC----CAGCAGTT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       9261 34 +     20762 A---T---T--TTC----CAGCAGTT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         119264 34 +    130994 A---T---T--TTC----CAGCAGTT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           38050 34 +     46263 A---T---T--TTC----CAGCAGTT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     31170 34 +     42640 A---T---T--TTC----CAGCAGTT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        14210 34 +     30600 A---T---T--TTC----CAGCAGTT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  100675 32 -    120886 --------T--TTG----TAGTAATT----GCA---C-AAA-A-GG-CT-TTTAA---G-A-A
i Sigmodon_hispidus.SigHis_scaffold_11332               I 1 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            19280 30 +    739146 G---T---T--TTA----TGGCAATT----G----A---A--C-AA-AT-CACCA---G-A-G
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2240155 34 +   2842873 a---t---t--tta----tagtaatt----atG---T-TAA-A-GT-GC-CACAG---G-A-A
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             235194 33 -    276980 A---T---T--TTA----TAGCAATT----A---GAT-TA--A-GA-GC-TACCA---A-A-A
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            27971 34 +     62062 A---T---T--TTA----TAGCAATT----A---GAC-TAA-A-GA-GC-CACCA---A-A-A
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189272503 30 + 218635234 a---t---t--tta----tagtaatt----A----A---A--A-GG-AC-CCCCA---A-A-A
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        15400 34 -  13920577 A---T---T--TTC----CAGCAATT----AAA---C-TAA-A-GG-GG-TACCA---G-G-A
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                 646 34 +     20549 A---T---T--GTG----TAGCATCT----A---GAC-TAA-A-GA-GC-CACCG---G-A-A
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               15086 34 +     45698 A---T---T--TTA----AATCATTT----ACA---C-TAG-T-AA-GC-CAAAA---G-A-A
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      807513 34 +   1148477 C---T---T--TTA----TAGCAATT----A---GAC-TAA-A-TA-GC-CACCA---A-A-A
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  58224 34 +     99546 C---T---T--TTA----TAGCAATT----A---GAC-TAA-A-TA-GC-CACCA---A-A-A
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               26909 25 +     42269 G---T---T--TTC----CAGCAATT----AAA---C-AAA-A-GT-G---------------
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               60225 25 +     65473 G---T---T--TTC----CAGCAATT----AAA---C-AAA-A-GT-G---------------
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194008264 34 - 194193292 a---t---t--ttc----cagcAATT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             39102 31 -     47444 A---T---T--TTA----TAGCAATT----GAA--ACGTA----GA-GC-TGTAA--------
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 I 29
s Tolypeutes_matacus.TolMat_scaffold_269431                  5909 34 +      6782 A---C---T--TTA----TAGCATTT----AGA---C-TA--ATGA-GC-CACAA---G-A-A
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  136465 34 -    259118 A---T---T--TTG----TAGCAATT----A---GAC-TAA-A-GA-GC-TACCA---G-A-A
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        27366 34 +     38948 A---T---T--TTC----CAGCAGTT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   21098 34 -     32910 A---T---T--TTC----CAGCAGTT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      2484 34 -     12939 A---T---T--TTC----CAGCAGTT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       2420 34 -     14244 A---T---T--TTC----CAGCAGTT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           43819 34 -     54611 A---T---T--TTC----CAGCAGTT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        1622 34 -     11566 A---T---T--TTC----CAGCAGTT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     3799 34 -     15592 A---T---T--TTC----CAGCAGTT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          2455 34 +     14371 A---T---T--TTC----CAGCAGTT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                    736 34 +     12481 A---T---T--TTC----CAGCAGTT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                         612 34 -     24393 A---T---T--TTC----CAGCAGTT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       5858 34 -     28054 A---T---T--TTC----CAGCAGTT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44660658 34 -  44834318 A---T---T--TTC----CAGCAGTT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       2966 34 +     13828 A---T---T--TTC----CAGCAGTT----AAA---C-TAA-A-GT-GG-TACCA---G-A-A
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   5555 29 +     90398 A---T---T--TTA----TAGTAATC----C----A---A----GA-GC-CACCA---A-A-A
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16085365 34 +  31416278 a---t---t--tta----taataatt----aga--TC--AA-A-GA-GC-CACAA---G-A-A
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2793307 33 -   3938065 A---C---T--TTA----TAGCAATT----AGA--TC--AG-A-GA-GC-TCC-A---G-A-A
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    5507 33 +     13056 A---A---T--TTA----TAGCAATT----AGA--TC--AA-A-GA-GC-TCC-T---G-A-A
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69313816 14 -  96451834 A---T---T--TTA----TAGTAATT-------------------------------------
i Tursiops_truncatus.MRVK01000923.1                     C 0 I 15
s Uropsilus_gracilis.UroGra_scaffold_69449                   1714 34 +     10241 A---T---T--TTA----TAGCAAAT----A---GAC-T-----AA-AT-AACCACTGG-A-A
i Uropsilus_gracilis.UroGra_scaffold_69449              I 7 C 0
s Ursus_maritimus.KK498671.1                              6515204 33 +  28682327 a---t---t--tta----tagcaatt----a---GAC-TA--A-GA-GC-CAcca---a-a-a
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  5699 11 -     20643 ------------------AGATAATT----AAA------------------------------
i Varecia_rubra.k141_432109                             C 0 I 7
s Varecia_variegata.k141_775891                             25240 11 -     33872 ------------------AGATAATT----AAA------------------------------
i Varecia_variegata.k141_775891                         C 0 I 7
s Vicugna_pacos.KN269600.1                                1525059 34 -   2331223 a---t---t--tta----taataatt----a---gaT-TAA-A-GA-GC-CACCA---G-A-A
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                138694 33 -    281493 A---T---T--TTA----TAGCAATT----A---GAC-TA--A-GA-GC-CACCA---A-A-A
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       127270 34 -    134049 A---T---T--TTA----TAGCAATT----ATG--A--TAA-A-CA-GC-CACAA---A-A-A
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        214677 33 -    227762 A---T---T--TTA----TAGCAATT----A---GAC-TA--A-GA-GT-CACCA---A-A-A
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     15988  2 -     20485 ------------------------------------------------------------g-t
i Zapus_hudsonius.ZapHud_scaffold_64392                 I 396 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           7315 14 -      8775 A---T---T--TTA----TAGTAATT-------------------------------------
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 I 15
e Macroglossus_sobrinus.MacSob_scaffold_879                701732 90 +    802869 I
e Sorex_araneus.JH798170.1                               17766452 15 -  27805282 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Megaderma_lyra.MegLyr_scaffold_3562                       64783 239 -    234502 I
e Elephantulus_edwardii.JH947210.1                        7816099 793 +  15467074 I
e Crocidura_indochinensis.CroInd_scaffold_848148              199  0 +      1327 C
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1008 325 -      5782 I
e Hylobates_klossii.k141_285563                               343 193 +      1026 I
e Microtus_ochrogaster.CM001673.1                        22820341  4 -  98408828 I
e Rattus_norvegicus.chr11                                13915860 1475 +  90463843 I
e Ondatra_zibethicus.OndZib_scaffold_6821                  125594  4 +    145789 I
e Graphiurus_murinus.GraMur_scaffold_4493                   77863  0 +    118900 C
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I
e Ellobius_talpinus.LOJH01090055.1                           7151  4 -      7838 I
e Ellobius_lutescens.LOEQ01003611.1                        240029  1 -    369425 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               12274 22 +    209709 cag--agtag--aC-ATTC---T---G-----AGTTTT
s Acinonyx_jubatus.LLWD01000356.1                         2034408 22 +   3721120 CAG--AATAG--AT-CTGC---A---G-----AGCTCC
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    112985 18 -    189883 ------ACAA--AC-A------TTCTG-----AGGCTC
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10657744 22 +  23371972 CAG--AATAG--AC-ATTC---A---G-----AGCTCT
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7095092 22 -  16596857 CAG--AATAG--AC-ATTC---A---G-----AGCTCC
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   17304 21 -     22067 CAG--AGTAGTCAT-T------CT--G-----AGGCT-
i Allactaga_bullata.AllBul_scaffold_70162               I 7 C 0
s Allenopithecus_nigroviridis.k141_2469532                   1789 22 -     60446 GAG--AGTAC--AC-ATTC---T---G-----AGCTTT
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         2509 22 -     29318 GAG--AGTAC--AC-ATTC---T---G-----AGCTTT
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         1444 22 +     38766 GAG--AGTAC--AC-ATTC---T---G-----AGCTTT
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          2403 22 -     80423 GAG--AGTAC--AC-ATTC---T---G-----AGCTTT
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            10706 22 -     18050 CAG--AGTAG--AC-ATTC---T---G-----AGCTTC
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_1710068                                421 22 +      1555 CAG--AGTAG--AC-ATTG---T---G-----AGCTTC
i Alouatta_caraya.k141_1710068                          C 0 C 0
s Alouatta_discolor.k141_811576                             11379 22 -     21359 CAG--AGTAG--AC-ATTC---T---G-----AGCTTC
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                1000 22 +      2129 CAG--AGTAG--AC-ATTG---T---G-----AGTTTC
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_2177643                           384 22 -      1868 CAG--AGTAG--AC-ATTG---T---G-----AGTTTC
i Alouatta_macconnelli.k141_2177643                     C 0 C 0
s Alouatta_nigerrima.k141_3537692                             433 22 +      1660 CAG--AGTAG--AC-ATTG---T---G-----AGTTTC
i Alouatta_nigerrima.k141_3537692                       C 0 C 0
s Alouatta_palliata.k141_2764429                              348 22 -      1480 CAG--AGTAG--AC-ATTC---T---G-----AGCTTC
i Alouatta_palliata.k141_2764429                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            4426 22 -      4927 CAG--AGTAG--AC-ATTG---T---G-----AGTTTC
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_1531728                             563 22 -      1692 CAG--AGTAG--AC-ATTC---T---G-----AGCTTC
i Alouatta_seniculus.k141_1531728                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3520543 22 +   4113121 CAG--AGCAG--AC-ATTC---A---A-----AGTGTT
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      390952 20 -    631301 CAT--AA--G--AC-ATTC---A---G-----AGCTTC
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            31126 22 +     33004 CAG--AGTAG--AT-ATTC---A---A-----AGTGTC
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 63058 22 +     78111 CAG--AGTAG--AC-ATTC---T---G-----AGCTTC
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            6000 22 +     22701 CAG--AGTAG--AC-ATTC---T---G-----AGCTTC
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5749957 22 +   9889416 CAG--AGTAG--AC-ATTC---T---G-----AGCTTC
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             6546 22 -    104377 CAG--AGTAG--AC-ATTC---T---G-----AGCTTC
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               6548 22 +     23246 CAG--AGTAG--AC-ATTC---T---G-----AGCTTC
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     4102 22 +      5067 CAG--AGTAG--AC-A---TTGT---C-----ATATTC
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        1458 19 +      9265 GAG--AACAG--CT-ATTC---T---G-----AC---C
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 9369 20 -     29036 CAT--AA--G--AC-ATTC---A---G-----AACTTC
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9539817 22 +  39197703 CAG--AGTAG--AC-ATTC---T---G-----AGCTTC
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             61088 22 +     85812 CAG--AGTAG--AC-ATTC---T---G-----AGCTTC
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                12101 22 +     89302 CAG--AGTAG--AC-ATTC---T---G-----AGCTTC
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             16604 22 -     58268 CAG--AGTAG--AC-ATTC---T---G-----AGCTTC
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             64596 22 +    119057 CAG--AGTAG--AC-ATTC---T---G-----AGCTTC
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               6567 22 -     25888 CAG--AGAAG--AC-ATTC---T---G-----AGCTTC
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 7183 22 -     16375 CAG--AATAG--AT-ATTC---T---G-----AGCAAT
i Avahi_laniger.k141_2840928                            I 7 C 0
s Avahi_peyrierasi.k141_798820                                802 21 +      6337 CAG--AATAG--AT-A-TC---T---G-----AGCAAT
i Avahi_peyrierasi.k141_798820                          I 7 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26380618 22 +  51448160 CAG--AGCAG--AC-ATTC---A---G-----TGTGTC
i Balaenoptera_acutorostrata.KI537095.1                 I 15 C 0
s Balaenoptera_bonaerensis.DF502048.1                        5790 22 -     13118 CAG--AGCAG--AC-ATTC---A---G-----AGTGTC
i Balaenoptera_bonaerensis.DF502048.1                   I 15 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   43613 22 -     72089 CAG--AGTAG--AC-ATTC---A---A-----AGTGTT
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6560275 22 +   6870073 CAG--AGTAG--AC-ATTC---A---A-----AGTGTC
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138140384 22 - 161108492 CAG--AGTAG--AC-ATTC---A---A-----AGTGTC
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     572925 22 -    998990 CAG--AGTAG--AC-ATTC---A---A-----AGTGTC
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136296117 22 - 158972876 CAG--AGTAG--AC-ATTC---A---A-----AGTGTC
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1233197 22 -   1914593 CAG--AGTAG--AC-ATTC---A---A-----AGTGTC
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               114454 22 -    171031 CAG--AGTAG--AC-ATTC---T---G-----AGCTTC
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 13483 22 +    125063 CAG--AGTAG--AC-ATTC---T---G-----AGCTTC
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                15526 22 -    216513 CAG--AGTAG--AC-ATTC---T---G-----AGCTTC
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        8069 22 -    134917 CAG--AGTAG--AC-ATTC---T---G-----AGCTTC
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3219988 21 -   8989139 CAG--AGTAG--AC-ATT----A---G-----ACTGTC
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           397689 21 -  15254737 CAG--AGTAG--AC-ATT----A---G-----ACTGTC
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2973425 21 +   6889770 CAG--AGTAG--AC-ATT----A---G-----ACTGTC
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11519890 22 +  39901454 CAG--AATAG--AC-ATTC---A---G-----AGCTCC
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   14915 22 +     87036 CAG--AATAG--AC-ATTC---A---G-----AGCTCC
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11266557 22 -  35597290 CAG--AATAG--AC-ATTC---A---G-----AGCTCC
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11089091 22 +  39895921 CAG--AATAG--AC-ATTC---A---G-----AGCTCC
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16456106 22 -  44759192 CAG--AATAG--AC-ATTC---A---G-----AGCTCC
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21325618 22 + 157394656 CAG--AGCAG--AC-ATTC---A---A-----AGTGTT
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135706846 22 - 157403528 CAG--AGCAG--AC-ATTC---A---A-----AGTGTT
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          309468 18 +    345090 ------GTAG--AC-ATTC---T---A-----AGCTTC
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               60151 20 +     67245 CAT--AA--G--AC-ATTC---A---G-----AGCTTC
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   31543 19 +     33760 CAG--AGTGG--AC-C------T---G-----AGACTC
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   159306 22 -    276539 CAG--AGTAG--AC-ATTC---A---A-----AGTGTT
i Catagonus_wagneri.CatWag_scaffold_1305                I 15 C 0
s Cavia_aperea.AVPZ01000278.1                            15787043 19 -  24422027 CAA--AGAAG--AC-A------T---G-----CAGTTC
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15798979 19 -  24440124 CAA--AGAAG--AC-A------T---G-----CAGTTC
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       177170 19 +    436027 CAA--AGAAG--AC-A------T---G-----CAGTTC
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18891300 22 -  29618158 CAG--AGTAG--AC-ATTC---T---G-----AGCTTC
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 8844 22 -     26817 CAG--AGTAG--AC-ATTC---T---G-----AGCTTC
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                13087 22 +     25043 CAG--AGTAG--AC-ATTC---T---G-----AGCTTC
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         8496 18 +     21754 ------GTAG--AC-ATTC---T---A-----AGCTTC
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4364305 22 +   7569818 CAG--AGTAG--AC-ATTC---A---G-----AGCTTC
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         4062 22 -      9338 CAG--AGTAG--AC-ATTC---A---G-----AGCTTC
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6555735 22 +   6739814 GAG--AGTAC--AC-ATTC---T---G-----AGCTTT
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      27212 22 +     60454 GAG--AGTAC--AC-ATTC---T---G-----AGCTTT
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          2418 22 -     21101 GAG--AGTAC--AC-ATTC---T---G-----AGCTTT
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         59727 22 -    107033 GAG--AGTAC--AC-ATTC---T---G-----AGCTTT
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        2617 22 -     17608 GAG--AGTAC--AC-ATTC---T---G-----AGCTTT
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          30113 22 +     30494 GAG--AGTAC--AC-ATTC---T---G-----AGCTTT
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          58958 22 -     59240 GAG--AGTAC--AC-ATTC---T---G-----AGCTTT
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          2659 22 +     16677 GAG--AGTAC--AC-ATTC---T---G-----AGCTTT
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           24818 22 +     35983 GAG--AGTAC--AC-ATTC---T---G-----AGCTTT
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11991344 22 +  12117833 GAG--AGTAC--AC-ATTC---T---G-----AGCTTT
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46478104 22 +  46592721 GAG--AGTAC--AC-ATTC---T---G-----AGCTTT
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      41654 22 -     45581 GAG--AGTAC--AC-ATTC---T---G-----AGCTTT
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       2660 22 +     35577 GAG--AGTAC--AC-ATTC---T---G-----AGCTTT
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        2435 22 -     25661 GAG--AGTAC--AC-ATTC---T---G-----AGCTTT
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        2413 22 -     17744 GAG--AGTAC--AC-ATTC---T---G-----AGCTTT
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        22030 22 +     37128 GAG--AGTAC--AC-ATTC---T---G-----AGCTTT
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           3185 22 -      6963 CAC--AATAG--TC-ATTC---T---G-----AGCTCC
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           59463 22 -     68416 CAG--AATAA--AT-ATTC---T---G-----AGCTGT
i Cheirogaleus_major.k141_1157592                       I 7 C 0
s Cheirogaleus_medius.k141_133808                            8508 22 +     13308 CAG--AATAA--AT-ATTC---T---G-----AGCTGT
i Cheirogaleus_medius.k141_133808                       I 7 C 0
s Cheracebus_lucifer.k141_619653                             6111 22 -     18223 CAG--AGCAG--AC-ATTC---T---G-----AGCTTC
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             23129 22 +     25473 CAG--AGCAG--AC-ATTC---T---G-----AGCTTC
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           42169 22 +     57117 CAG--AGCAG--AC-ATTC---T---G-----AGCTTC
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          46848 22 +     54541 CAG--AGCAG--AC-ATTC---T---G-----AGCTTC
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15962169 19 +  43084221 CAA--AAAAG--AC-A------T---G-----AGATTC
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         71655 22 +    196370 CAG--AGTAG--AC-ATTC---T---G-----AGCTTC
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          15835 22 +     40510 CAG--AGTAG--AC-ATTC---T---G-----AGCTTC
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15139550 22 -  15256731 GAG--AGTAC--AC-ATTC---T---G-----AGCTTT
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      34631 22 -     53260 GAG--AGTAC--AC-ATTC---T---G-----AGCTTT
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101145191 22 + 101219884 GAG--AGTAC--AC-ATTC---T---G-----AGCTTT
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                16888 22 -     21363 AAC--AGTAG--GC-ATTC---T---G-----AGTTCC
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           762191 22 +    964067 AAC--AGTAG--GC-ATTC---T---G-----AGTTCC
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10886955 22 +  10971483 CAG--AGTAC--AC-ATTC---T---G-----AGCTTT
i Colobus_angolensis.KN985967.1                         I 16 C 0
s Colobus_guereza.LG08                                  147665120 22 + 156195979 CAG--AGTAC--AC-ATTC---T---G-----AGCTTT
i Colobus_guereza.LG08                                  I 16 C 0
s Colobus_polykomos.k141_1406057                            17105 22 +     23629 CAG--AGTAC--AC-ATTC---T---G-----AGCTTT
i Colobus_polykomos.k141_1406057                        I 16 C 0
s Condylura_cristata.JH655880.1                          60614018 22 +  78930452 CAG--AGTAG--AC-ATTA---A---G-----AGTTTC
i Condylura_cristata.JH655880.1                         C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 278955 22 -    399297 GAA--AGTAG--AC-A------TTCTG-----AGACTC
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53029641 22 +  72327488 GAG--AGTAT--AC-A------TTCTG-----AGGCTT
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            52444 22 -     70449 CAG--AATAG--AT-ATTC---A---G-----AACTCC
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  208625 19 -    956709 CAG--AACAG--AC-A------A---G-----AGAGGC
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 I 230
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 31086 18 -     67205 CAG--AAAAC--A--A------T---G-----AGACTC
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                18205 12 +     26546 CAG--AAAAG--AC-A------C---------------
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 I 5
s Dasyprocta_punctata.DasPun_flattened_line_634             59293 19 -    236241 aag--agaag--ac-a------t---a-----caattc
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          184069 22 -   6883506 CAT--AACAA--TC-ATTC---T---G-----AGCTTC
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16845330 22 +  31942871 CAG--AATAG--AT-ATTC---T---G-----AGCTTC
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80037242 22 -  96802777 TAG--AGCAG--AC-ATTC---A---G-----AGTGTC
i Delphinapterus_leucas.KZ290064.1                      I 15 C 0
s Desmodus_rotundus.KZ672188.1                           18699430 20 -  18957592 CAT--AA--G--AC-ATTC---A---G-----AGCTTC
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 322958 22 +    993696 CAG--AGTAG--AC-ATTC---A---G-----AGCTTC
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   3609 22 +    151128 CAG--AGTAG--AC-ATTC---A---G-----AGCTTC
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   157433 19 +    228994 CAG--AAAAG--AT-A------C---G-----AGATTT
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3656742 22 +   4240102 TAC--AGTAG--AC-A---TTCT---A-----ACATTC
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 28385 22 +     28912 TAC--AGTAG--AC-A---TTCT---A-----ACATTC
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                36517 19 -     73477 CAG--AGAAG--AC-A------T---G-----TGACTC
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22998994 22 -  44670279 CAC--AGTAG--CT-ATTA---T---G-----ATGTTT
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 12678 22 +     24177 CAG--AGTAG--AC-ATTC---A---G-----AGCTTC
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1491889 22 +   1727528 CAG--AGTAG--AC-ATTC---A---A-----AGTGTC
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Enhydra_lutris.KZ291749.1                              85872618 22 +  99434291 CAG--AATAG--AC-ATTC---A---G-----AGCTCC
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4705000 22 +   6522550 CAT--AATAG--AC-ATTC---A---G-----AGCTTC
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5853406 22 -   7175178 CAG--AGTAG--AC-ACCC---A---G-----AGCTAC
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13351911 22 +  41866177 CAG--AGTAG--AC-ACCC---A---G-----AGCTAC
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          13400 22 +     92910 CAG--AGTAG--AC-ACCC---A---G-----AGCTAC
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11534682 22 +  16010500 GAG--AGTAG--GG-ACTT---G---G-----AGTTTC
i Erinaceus_europaeus.JH835290.1                        I 1 C 0
s Erythrocebus_patas.Contig8                             48774318 20 -  48907691 GAG--AGTAC--AC-ATTC---T---G-----AGCT--
i Erythrocebus_patas.Contig8                            C 0 I 1757
s Eschrichtius_robustus.EscRob_flattened_line_685          315458 22 +    330699 CAG--AGCAG--AC-ATTC---A---G-----AGTGTC
i Eschrichtius_robustus.EscRob_flattened_line_685       I 15 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             61911 22 +     89355 CAG--AGCAG--AC-ATTC---A---G-----AGTGTC
i Eubalaena_japonica.EubJap_flattened_line_7756         I 15 C 0
s Eulemur_albifrons.k141_715837                              5505 22 +     13586 CAG--AATAG--AT-ATTC---T---G-----AGCTGC
i Eulemur_albifrons.k141_715837                         I 7 C 0
s Eulemur_collaris.k141_311830                               5436 22 -      6809 CAC--AATAG--AT-ATTC---T---G-----AGCTGC
i Eulemur_collaris.k141_311830                          I 7 C 0
s Eulemur_coronatus.k141_3240342                            11913 22 +     36558 CAC--AATAG--AT-ATTC---T---G-----AGCTGC
i Eulemur_coronatus.k141_3240342                        I 7 C 0
s Eulemur_flavifrons.k141_903901                             8234 22 +     60246 GAG--AATAG--AT-ATTC---T---G-----AGCTGC
i Eulemur_flavifrons.k141_903901                        I 7 C 0
s Eulemur_fulvus.k141_653297                                11710 22 +    109717 CAC--AATAG--AT-ATTC---T---G-----AGCTGC
i Eulemur_fulvus.k141_653297                            I 7 C 0
s Eulemur_macaco.k141_1341545                               16096 22 +     16540 GAG--AATAG--AT-ATTC---T---G-----AGCTGC
i Eulemur_macaco.k141_1341545                           I 7 C 0
s Eulemur_mongoz.k141_825972                                16371 22 +     27497 CAG--AATAG--AT-ATTC---T---G-----AGCTGC
i Eulemur_mongoz.k141_825972                            I 7 C 0
s Eulemur_rubriventer.k141_411740                           18828 22 +     26808 CAG--AATAG--AT-ATTC---T---G-----AGCTGC
i Eulemur_rubriventer.k141_411740                       I 7 C 0
s Eulemur_rufus.k141_1620292                                33566 22 +     46535 CAC--AATAG--AT-ATTC---T---G-----AGCTGC
i Eulemur_rufus.k141_1620292                            I 7 C 0
s Eulemur_sanfordi.k141_186399                              16290 22 -     29447 CAC--AATAG--AT-ATTC---T---G-----AGCTGC
i Eulemur_sanfordi.k141_186399                          I 7 C 0
s Felis_catus.CM001386.2                                129893363 22 - 159252932 CAG--AACAG--AT-CTGC---A---G-----AGCTCC
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129280455 22 - 158578461 CAG--AACAG--AT-CTGC---A---G-----AGCTCC
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 21595 22 +     52776 CAG--AACAG--AT-CTGC---A---G-----AGCTCC
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Galago_moholi.ctg555                                     211357 22 -    847004 CAG--AATAG--AT-ATTC---T---G-----ACCTCC
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           13731 22 -     43889 CAG--AATAG--AT-ATTC---T---G-----ACCTCC
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          10805 22 +     27357 CAG--AATAG--AT-ATTC---T---G-----ACCTCC
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               156724 22 +    324696 CAG--AGTAA--AC-ATTC---T---G-----AGTTTC
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    181688 22 -    189561 CAG--AGTAG--AC-ATTC---A---A-----AGTGTC
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           13493 12 -     18683 ---------------A---TTGT---G-----AGATTT
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               5792 22 -     14630 CAG--AGTAG--AC-ATTC---T---G-----AGCTTT
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119652892 22 - 195582420 CAG--AGTAG--AC-ATTC---T---G-----AGCTTT
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         2282 22 +     10286 GAG--AATAG--AT-ATTC---T---G-----AGCTGC
i Hapalemur_alaotrensis.k141_1280836                    I 7 C 0
s Hapalemur_gilberti.k141_279011                              759 22 -     11661 GAG--AATAG--AT-ATTC---T---G-----AGCTGC
i Hapalemur_gilberti.k141_279011                        I 7 C 0
s Hapalemur_griseus.k141_1387522                             6088 22 +     56096 GAG--AATAG--AT-ATTC---T---G-----AGCTGC
i Hapalemur_griseus.k141_1387522                        I 7 C 0
s Hapalemur_meridionalis.k141_186231                        29339 22 -     42470 GAG--AATAG--AT-ATTC---T---G-----AGCTGC
i Hapalemur_meridionalis.k141_186231                    I 7 C 0
s Hapalemur_occidentalis.k141_797938                        45962 22 -     54384 GAG--AATAG--AT-ATTC---T---G-----AGCTGC
i Hapalemur_occidentalis.k141_797938                    I 7 C 0
s Helogale_parvula.HelPar_flattened_line_22962              17650 22 +     53719 CAG--AATAG--TT-ATTC---A---G-----AGCTCC
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                27903 22 -     91191 CAG--AGCAG--AC-ATTC---A---A-----AGTGTT
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2551524 19 +  31725842 CAG--GGAAG--AG-A------T---G-----AGATTC
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               61344 16 +     73687 T-T--AGTAG--AT-TTTC---T---G-----A-----
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 I 1157
s Hippopotamus_amphibius.HipAmp_scaffold_1308              147549 22 +    277961 CAC--AGGAG--AC-ATTC---A---G-----AGTGTC
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      278817 22 -    477199 CAG--AGTAG--AC-ATTC---A---G-----CGCTTC
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              7963 22 -      9143 CAG--AGTAG--AC-ATTC---A---G-----AGCTTC
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      5479 22 -   7690867 CAG--AGTAG--AC-ATTC---T---G-----AGCTTT
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 17720 22 -     67322 CAG--AATAG--AT-ATTC---A---G-----AGTTCC
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19424 19 -    119109 cag--agaga--ac-a------t---g-----cgagtt
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_164775                               283 22 -      2073 CAG--AGTAG--AC-ATTC---T---G-----AGCTTT
i Hylobates_abbotti.k141_164775                         C 0 C 0
s Hylobates_agilis.k141_1878600                               520 22 -      1230 CAG--AGTAG--AC-ATTC---T---G-----AGCTTT
i Hylobates_agilis.k141_1878600                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14625173 22 -  25970782 CAG--AGTAG--AC-ATTC---T---G-----AGCTTT
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            2429 22 -      2977 CAG--AGTAG--AC-ATTC---T---G-----AGCTTT
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             34332 22 -     60944 CAG--AGTAG--AC-ATTC---T---G-----AGCTTT
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     6594 19 +     22540 CAG--AGAAG--AC-A------T---G-----AGATTC
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7126273 22 +  13083262 CAG--ACTAG--AT-G---TTGT---G-----AGAATC
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_5141390                                    816 22 -      3181 CAG--AATAG--AT-ATTC---T---G-----AGTAGT
i Indri_indri.k141_5141390                              I 7 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               9447 22 +     17520 CAG--AGCAG--AC-ATTC---A---G-----AGTGTC
i Inia_geoffrensis.IniGeo_flattened_line_66725          I 15 C 0
s Jaculus_jaculus.JH725517.1                              8566318 21 +  11848649 CAG--AGTAGTCAT-T------CT--G-----AGGCT-
i Jaculus_jaculus.JH725517.1                            I 7 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               24059 15 +     37189 CAG--AGCAG--AC-ATTC---A---------------
i Kogia_breviceps.KogBre_flattened_line_35920           I 15 I 5
s Lagothrix_lagothricha.k141_12968                          50686 22 -    147782 CAG--AGTAG--AC-ATTC---T---G-----AGCTTC
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                     756 22 +     26176 CAT--AATAG--AC-ATTC---A---G-----AGCTTC
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258407643 22 - 285822530 CAG--AATAG--AT-ATTC---T---G-----AGCTGC
i Lemur_catta.scaffold_1                                I 7 C 0
s Lepilemur_ankaranensis.k141_884009                        24401 22 +     39228 CCG--AATAA--AT-ATTC---T---G-----AGCTGT
i Lepilemur_ankaranensis.k141_884009                    I 7 C 0
s Lepilemur_dorsalis.k141_134267                            53785 22 +     63517 CTG--AATAA--AT-ATTC---T---G-----AGCTGT
i Lepilemur_dorsalis.k141_134267                        I 7 C 0
s Lepilemur_ruficaudatus.k141_617879                        79049 22 +    116806 CAG--AATAA--AT-ATTC---T---G-----AGCTGT
i Lepilemur_ruficaudatus.k141_617879                    I 7 C 0
s Lepilemur_septentrionalis.k141_578524                     32040 22 -     33031 CCG--AATAA--AT-ATTC---T---G-----AGCTGT
i Lepilemur_septentrionalis.k141_578524                 I 7 C 0
s Leptonychotes_weddellii.KB714749.1                      3086410 22 -   3498232 caa--aatag--ac-attt---a---G-----AGCTCC
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    13693 22 +     22452 CAG--AGTTG--AC-ATCC---T---G-----AGTTTC
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            136403 22 +   3060487 CAG--AGCAG--AC-ATTC---A---G-----AGTGTC
i Lipotes_vexillifer.KE558548.1                         I 15 C 0
s Lophocebus_aterrimus.ctg55                             19248829 22 +  19376315 GAG--AGTAC--AC-ATTC---T---G-----AGCTTT
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           11106 22 +     84689 CAG--AATAG--AT-ATTC---T---G-----ACCTTT
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3778855 22 +   6799190 CAG--AATAG--AT-ATTC---T---G-----ACCTTT
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20594724 22 -  62548349 CAC--AGTAG--GC-ATTC---T---G-----AGACTC
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11088547 22 +  39895028 CAG--AATAG--AC-ATTC---A---G-----AGCTCC
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             20564 22 +     74745 GAG--AGCAC--AC-ATTC---T---G-----AGCTTT
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12707021 22 +  12821369 GAG--AGTAC--AC-ATTC---T---G-----AGCTTT
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                2663 22 -      3136 GAG--AGTAC--AC-ATTC---T---G-----AGCTTT
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           47480 20 +     63263 --G--AGCAC--AC-ATTC---T---G-----AGCTTT
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                 2186 22 -      2568 GAG--AGTAC--AC-ATTC---T---G-----AGCTTT
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 2771 22 -      7381 GAG--AGTAC--AC-ATTC---T---G-----AGCTTT
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  45988 22 -     79256 GAG--AGTAC--AC-ATTC---T---G-----AGCTTT
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196036095 22 + 196197964 GAG--AGCAC--AC-ATTC---T---G-----AGCTTT
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11446265 22 +  11645122 GAG--AGGAC--AC-ATTC---T---G-----AGCTTT
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   4935 22 -     46448 GAG--AGTAC--AC-ATTC---T---G-----AGCTTT
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                2609 22 -     13212 GAG--AGTAC--AC-ATTC---T---G-----AGCTTT
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 16288 22 -     55006 GAG--AGTAC--AC-ATTC---T---G-----AGCTTT
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43841404 22 +  43892939 GAG--AGTAC--AC-ATTC---T---G-----AGCTTT
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               17574 22 -     24607 GAG--AGTAC--AC-ATTC---T---G-----AGCTTT
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               4940 22 -     27140 GAG--AGTAC--AC-ATTC---T---G-----AGCTTT
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43437989 22 -  43563597 GAG--AGTAC--AC-ATTC---T---G-----AGCTTT
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4450809 22 -   4543643 GAG--AGTAC--AC-ATTC---T---G-----AGCTTT
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            146490 22 +    252755 CAG--AGTAG--AC-ATTC---A---G-----AGCATC
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             36633 22 +     58827 CAG--AGTAG--AC-ATTC---A---G-----AGCATC
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36874097 22 +  64221397 CAG--ACTAG--AC-G---TTGT---G-----AGAATC
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             1430 22 -     87323 CAG--AATAG--AC-ATTC---A---G-----AGCTCC
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               13360 22 +     15977 AAG--AGTAG--AC-A------TTCCA-----AGGCTC
i Meriones_unguiculatus.MerUng_scaffold_52233           I 3 C 0
s Mesocricetus_auratus.KB708139.1                         1047327 22 -  26018355 GAG--AGTGT--AC-G------TTCTG-----AGGCTT
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_227248                    731 22 -      1377 CAG--AGCAG--AC-ATTC---A---G-----AGTGTC
i Mesoplodon_bidens.MesBid_scaffold_227248              I 15 C 0
s Microcebus_murinus.CM007691.1                          16510675 22 +  47401472 CAG--AATAG--AT-ATTC---T---G-----AGCTGT
i Microcebus_murinus.CM007691.1                         I 7 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  35005 22 -     48017 CAC--AGTAG--CT-ATTC---T---G-----ATATTT
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               23342 20 -     32043 CAT--AA--G--AC-ACTC---A---G-----AGCTTC
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8210498 22 +  10048721 CAT--GGTAG--AC-ATTC---A---G-----AGCTCC
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            34987 22 +     45743 CAT--GGTAG--AC-ATTC---A---G-----AGCTCC
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         2538 22 +     29742 GAG--AGTAC--AC-ATTC---T---G-----AGCTTT
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        11926 22 -    104932 CAA--AATAG--AC-ATTT---A---G-----AGCTCC
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     6063 22 +      8497 CAG--AATAG--AT-ATTC---T---G-----AGCTGT
i Mirza_zaza.k141_226143                                I 7 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 146832 22 +    154973 TAG--AGCAG--AC-ATTC---A---G-----AGTGTC
i Monodon_monoceros.MonMon_M_scaffold_5598              I 15 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                161860 22 +    265003 CAT--AACAG--AT-AGTC---A---G-----AGCTTC
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  1919 22 -     19904 CAG--AGTAG--AC-ATTC---A---A-----AATGTC
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  145345 22 -    168139 CAG--AATAG--TT-ATTC---A---G-----AGCTCC
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          19962 22 -    100666 CAT--AATAG--AC-ATTC---A---G-----AGCTTC
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70766961 22 +  92629107 GAG--AGGGG--AC-A------TTCTG-----AAACAC
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75490021 22 +  98207768 GAG--AGGGA--AC-A------TTCTG-----AGATAC
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67556259 22 +  89017189 gag--aagag--ac-a------ttCTG-----AGGCAT
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74331196 22 +  97876770 GAG--AGGGG--AC-A------TTCTG-----AGACAC
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             12246 12 +     98495 ---------------A---TTAT---G-----AGGATA
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4424799 22 -  28371801 CAG--AATAG--AC-ATTC---A---G-----AGCTCC
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     90376 19 -    117718 CAG--AAAAC--AC-A------T---G-----AGACTC
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               968273 22 +   8389877 CAT--AATAG--AC-ATTC---A---G-----AGCTTC
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5019946 22 +   6462685 CAT--AATAG--AC-ATTC---A---G-----AGCTTC
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3465855 22 -   3747815 CAT--AATAG--AC-ACTC---A---G-----AGCTTC
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        11065 22 +     66751 CAT--AATAG--AC-ATTC---A---G-----AGCTTC
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             5455 22 -      8794 CAC--AGTAG--GC-ATTT---T---G-----AGCTTC
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            119147 12 +    362372 gag--gggag--at-a------t---------------
i Nannospalax_galili.KL201303.1                         I 59 I 6
s Nasalis_larvatus.k141_153429                               9045 22 +     48152 CAG--AATAC--AC-ATTC---T---G-----AGCTTT
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4485316 22 -  14209539 caa--aatag--ac-attt---A---G-----AGCTCC
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3951444 22 -   4490290 CAG--AGCAG--AC-ATTC---A---G-----AGTGTC
i Neophocaena_asiaeorientalis.KZ688543.1                I 15 C 0
s Nomascus_annamensis.k141_220265                             940 22 +      1763 CAG--AGTAG--AC-ATTC---T---G-----AGCTTT
i Nomascus_annamensis.k141_220265                       I 194 I 30
s Nomascus_concolor.k141_226614                              1731 22 -      5092 CAG--AGTAG--AC-ATTC---T---G-----AGCTTT
i Nomascus_concolor.k141_226614                         C 0 I 126
s Nomascus_gabriellae.k141_1004198                            298 22 +      1448 CAG--AGTAG--AC-ATTC---T---G-----AGCTTT
i Nomascus_gabriellae.k141_1004198                      C 0 C 0
s Nomascus_siki_b.tarseq_80                             25449 22 -  18771707 CAG--AGTAG--AC-ATTC---T---G-----AGCTTT
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  3152 22 +      4512 CAG--AGTAG--AC-ATTC---T---G-----AGCTTT
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                31347 22 +   3668941 CAG--ACTAG--AC-ATTC---A---G-----AGCTCC
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65567550 22 -  95554990 CAG--AATAG--AT-ATTC---T---G-----ACCTTC
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            4276 22 +      6470 CAG--AATAG--AT-ATTC---T---G-----ACCTTC
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65669885 22 +  89412551 CAG--AATAG--AT-ATTC---T---G-----ACCTTC
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4996440 22 -  23139505 CAG--AGTTG--AC-ATCC---T---G-----AGGTTC
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3685908 19 +  10294119 CAG--AAAAC--AC-A------T---G-----AGACTT
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             679983 22 -   3126709 CAA--AATAG--AC-ATTC---A---G-----AGTTCC
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1080119 22 +   1425656 CAG--AGTAG--AC-ATTC---A---A-----AGTGTC
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         37416 22 +     78940 CAG--AGTAG--AC-ATTC---A---A-----AGTGTC
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  37519 21 +     62360 GAG--AGCA---GC-A------TTCTG-----AGGCTC
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7225129 22 -   7562323 CAG--AGCAG--AC-ATTC---A---G-----AGTGTC
i Orcinus_orca.KB316965.1                               I 15 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              58018 22 -     66828 CAC--AGTAG--AC-ATTC---T---G-----AGATTT
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141876727 22 + 163896628 CAG--AGTTG--AC-ATCC---T---G-----AGCTTC
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      308631 22 -    505867 CAG--AATAG--AC-ATTC---A---G-----AGCTCC
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        1175 22 -     53940 CAG--AGTAG--AT-ATTC---T---G-----ACCTCC
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18009155 22 -  38779656 CAG--AGTAG--AT-ATTC---T---G-----ACCTCC
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134077694 22 - 275406953 CAG--AGCAG--AC-ATTC---A---A-----AGTGTT
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      78909 22 +    140051 CAG--AGCAG--AC-ATTC---A---A-----AGTGTT
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127575158 22 - 205426864 CAG--AGTAG--AC-ATTC---T---G-----AGCTTT
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120152312 22 - 196562556 CAG--AGTAG--AC-ATTC---T---G-----AGCTTT
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  34748  7 +    295523 --------------------------G-----AGCTCC
i Panthera_onca.PanOnc_flattened_line_1615              I 7 C 0
s Panthera_pardus.KV860323.1                              3638482  7 +  18214204 --------------------------G-----AGCTCC
i Panthera_pardus.KV860323.1                            I 7 C 0
s Panthera_tigris.KE721879.1                              5028157  7 -   6340057 --------------------------G-----AGCTCC
i Panthera_tigris.KE721879.1                            I 7 C 0
s Pantholops_hodgsonii.KE114631.1                         1066544 22 -   1292953 CAG--AGCAG--AC-ATTC---A---A-----AGTGTT
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188156776 22 - 188283584 GAG--AGTAC--AC-ATTC---T---G-----AGCTTT
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             5093 22 +      5367 GAG--AGTAC--AC-ATTC---T---G-----AGCTTT
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47514161 22 +  47705337 GAG--AGTAC--AC-ATTC---T---G-----AGCTTT
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 68137 22 -    104429 GAG--AGTAC--AC-ATTC---T---G-----AGCTTT
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    6673 22 +     14967 GAG--AGTAC--AC-ATTC---T---G-----AGCTTT
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 2532 22 -      7628 GAG--AGTAC--AC-ATTC---T---G-----AGCTTT
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    116224 22 -    135482 CAG--AATTG--AT-ATTC---G---G-----AGCTCC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           5864 22 -     23713 CGG--AATAG--CT-ATCC---T---G-----ACCTTC
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            25177 22 -     27972 CGG--AATAG--CT-ATCC---T---G-----ACCTTC
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359        260 22 +     49596 TAG--AGTAG--AC-A---TTCT---G-----ACATTT
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4950767 21 -   8017169 GAG--AGCAG--AC-A------TTCTG-----AG-CGC
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    13347 25 -     36578 ctg--ggaag--agga------t---gtagccagaatc
i Petromus_typicus.PetTyp_scaffold_33007                I 7 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            121734 22 -    122454 CAG--AGCAG--AC-ATTC---A---G-----AGTGTC
i Phocoena_phocoena.PhoPho_flattened_line_11948         I 15 C 0
s Piliocolobus_badius.k141_1987485                           2559 22 -      5908 CAG--AGTAC--AC-ATTC---T---G-----AGCTTT
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       3183 22 -     17985 CAG--AGTAC--AC-ATTC---T---G-----AGCTTT
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            2550 22 +      7694 CAG--AGTAC--AC-ATTC---T---G-----AGCTTT
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26741028 22 +  26888534 CAG--AGTAC--AC-ATTC---T---G-----AGCTTT
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            98345 22 +    112873 CAT--AATAG--AC-ATTT---A---G-----AGCTTC
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             44292 22 -     61926 CAG--AGTAG--AC-ATTC---T---G-----AGCTTC
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        25677 22 +     78826 CAG--AGTAG--AC-ATTC---T---G-----AGCTTC
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              9724 22 -     15800 CAG--AGTAG--AC-ATTC---T---G-----AGCTTC
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        12923 22 -     16101 CAG--AGTAG--AC-ATTC---T---G-----AGCTTC
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          6151 22 +      9673 CAG--AGTAG--AC-ATTC---T---G-----AGCTTC
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13475151 22 -  19735023 CAG--AGTAG--AC-ATTC---T---G-----AGCTTC
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           14054 22 -     31692 CAG--AGTAG--AC-ATTC---T---G-----AGCTTC
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           5820 22 +     21690 CAG--AGCAG--AC-ATTC---A---G-----AGTGTC
i Platanista_gangetica.PlaMin_flattened_line_72990      I 15 C 0
s Plecturocebus_bernhardi.k141_959214                       23394 22 +     44506 CAG--AGCAG--AC-ATTC---T---G-----AGCTTC
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        23606 22 +     67491 CAG--AGCAG--AC-ATTC---T---G-----AGCTTC
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      13846 22 -     98129 CAG--AGCAG--AC-ATTC---T---G-----AGCTTC
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     23446 22 +    147771 CAG--AGCAG--AC-ATTC---T---G-----AGCTTC
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        23703 22 -     23762 CAG--AGCAG--AC-ATTC---T---G-----AGCTTC
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          4165 22 -     55515 CAG--AGCAG--AC-ATTC---T---G-----AGCTTC
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         23519 22 +    152463 CAG--AGCAG--AC-ATTC---T---G-----AGCTTC
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       1236 22 -    119457 CAG--AGCAG--AC-ATTC---T---G-----AGCTTC
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         13242 22 +    134592 CAG--AGCAG--AC-ATTC---T---G-----AGCTTC
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          23829 22 -     75465 CAG--AGCAG--AC-ATTC---T---G-----AGCTTC
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              187678 22 -    373494 CAG--AGTAG--AC-ATTC---T---G-----AGCTTT
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19808326 22 +  19899266 CAG--AGTAG--AC-ATTC---T---G-----AGCTTT
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               6289 22 -     15069 CAG--AATAC--AC-ATTC---T---G-----AGCTTT
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              6419 22 +     14865 CAG--AATAC--AC-ATTC---T---G-----AGCTTT
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                2451 16 -      9567 T-T--AGTAG--AC-TTTC---T---G-----A-----
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 I 1156
s Prolemur_simus.MPIZ01000048.1                           6849020 22 +  12164890 GAG--AATAG--AT-ATTC---T---G-----AGCTGC
i Prolemur_simus.MPIZ01000048.1                         I 7 C 0
s Propithecus_coquerelli.NW_012147863.1                     19177 22 -     30946 nnn--nnnnn--nn-nnnn---n---n-----nnnnnn
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         4098 22 +     11805 CAG--AATAG--AT-ATTC---T---G-----AGCAAT
i Propithecus_coronatus.k141_1353159                    I 7 C 0
s Propithecus_diadema.k141_577245                           43441 22 +     52369 CAG--AATAG--AT-ATTC---T---G-----AGCAAT
i Propithecus_diadema.k141_577245                       I 7 C 0
s Propithecus_edwardsi.k141_1317105                         35828 22 -     44753 CAG--AATAG--AT-ATTC---T---G-----AGCAAT
i Propithecus_edwardsi.k141_1317105                     I 7 C 0
s Propithecus_perrieri.k141_7554                            17752 22 +     27322 CAG--AATAG--AT-ATTC---T---G-----AGCAAT
i Propithecus_perrieri.k141_7554                        I 7 C 0
s Propithecus_tattersalli.k141_907138                       17388 22 -     53241 CAG--AATAG--AT-ATTC---T---G-----AGCAAT
i Propithecus_tattersalli.k141_907138                   I 7 C 0
s Propithecus_verreauxi.k141_158021                         39652 22 -     48185 CAG--AATAG--AT-ATTC---T---G-----AGCAAT
i Propithecus_verreauxi.k141_158021                     I 7 C 0
s Psammomys_obesus.NESX01026517.1                           35643 22 +     77221 GAG--AGTAG--AC-A------TTGCA-----AGGCTC
i Psammomys_obesus.NESX01026517.1                       I 2 C 0
s Pteronotus_parnellii.KE867983.1                            4500 22 -     27784 CAT--AACAG--AT-ATTC---A---G-----AGCTTC
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        247109 22 -    344369 CAG--AATAG--AC-ATTC---A---G-----AGCTCC
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13246415 22 -  17261082 CAG--AATAG--AC-GTTA---A---G-----AGCTTC
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             604366 22 -   3946241 CCG--AATAG--AC-GTTA---A---G-----AGCTTC
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131534747 22 - 161321710 CAG--AATAG--AT-CTGC---A---G-----AGCTCC
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             30410 22 +     56732 CAG--AATAC--AC-ATTA---T---G-----AGCTTT
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6806898 22 +   6970761 CAG--AATAC--AC-ATTC---T---G-----AGCTTT
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             6289 22 +     18040 CAG--AATAC--AC-ATTC---T---G-----AGCTTT
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                16216 22 +     68503 CAG--AGTAG--AC-ATTC---A---A-----AGGGTC
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1788241 22 +   2252614 GAG--AGTAG--AC-ATTC---A---G-----AGCTTC
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                             699 22 -     17045 CAG--AATAC--AC-ATTC---T---G-----AGCTTT
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206378176 22 - 206558726 cag--aatac--ac-attc---t---g-----aGCTTT
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44857090 22 -  45163003 CAG--AATAC--AC-ATTC---T---G-----AGCTTT
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                19748 22 +    109198 CAG--AATAA--AC-GTTC---A---G-----AGCTTC
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       8370 22 +     12214 CAG--AGTAG--AC-ATTC---A---A-----AGTGTT
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15673256 22 -  43202129 CAG--AGTAG--AC-ATTC---T---G-----AGCTTT
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        5169 22 +     34089 CAG--AGTAG--AC-ATTC---T---G-----AGCTTT
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              5111 22 -     60842 CAG--AGTAG--AC-ATTC---T---G-----AGCTTT
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              5204 22 +     67014 CAG--AGTAG--AC-ATTC---T---G-----AGCTTT
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              5182 22 +     60816 CAG--AGTAG--AC-ATTC---T---G-----AGCTTT
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 5119 22 -     76454 CAG--AGTAG--AC-ATTC---T---G-----AGCTTT
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17341844 22 -  30362882 CAG--AATAG--AC-ATTC---T---G-----AGCTTC
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         21205 22 -     62485 CAG--AATAG--AC-ATTC---T---G-----AGCTTC
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   32705 22 -    114521 CAG--AGTAG--AC-ATTG---A---G-----AGTTTC
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        3902 22 +     15331 CAG--AATAC--AC-ATTC---T---G-----TGCTTT
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       9295 22 +     20762 CAG--AATAC--AC-ATTC---T---G-----TGCTTT
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         119298 22 +    130994 CAG--GATAC--AC-ATTC---T---G-----TGCTTT
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           38084 22 +     46263 CAG--AATAC--AC-ATTC---T---G-----TGCTTT
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     31204 22 +     42640 CAG--AATAC--AC-ATTC---T---G-----TGCTTT
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        14244 22 +     30600 CAG--AATAC--AC-ATTC---T---G-----TGCTTT
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  100707 22 -    120886 GAG--AGTAG--AC-A------TTCTA-----AGACTC
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            19310 22 +    739146 CAC--AGTAG--TC-ATTC---A---G-----AACTTC
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2240189 22 +   2842873 GAG--ACTAG--AT-G---TTGT---G-----AGAATC
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             235227 22 -    276980 AAG--GACAG--AC-ATTC---A---G-----AGCTCC
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            28005 22 +     62062 CAG--AATAG--TT-ATTC---A---G-----AGCTCC
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189272533 10 + 218635234 CAG--AGTAG--AC------------------------
i Sus_scrofa.CM000824.4                                 C 0 I 8
s Symphalangus_syndactylus.tarseq_24                        15434 22 -  13920577 CAG--AGTAG--AC-ATTC---T---G-----AGCTTT
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                 680 22 +     20549 CAT--AACAG--AC-ATTC---A---G-----AGCTTC
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               15120 22 +     45698 CAC--AGTAG--GC-ATTC---T---G-----AGCTTT
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      807547 22 +   1148477 CAG--AATAG--AC-ATTC---A---G-----AGCTTC
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  58258 22 +     99546 CAG--AATAG--AC-ATTC---A---G-----AGCTTC
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               26934  5 +     42269 ---------------------------------GCTTC
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               60250  5 +     65473 ---------------------------------GCTTC
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194008298 22 - 194193292 GAG--AGTAC--AC-ATTC---T---G-----AGCTTT
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  5943 19 +      6782 CAC--AATAG--TC-ATTC---T---G-----AGC---
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  136499 20 -    259118 CAT--AA--G--AT-ATTC---A---G-----AGCTTC
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        27400 22 +     38948 CAG--AATAC--AC-ATTC---T---G-----TGCTTT
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   21132 22 -     32910 CAG--AATAC--AC-ATTC---T---G-----TGCTTT
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      2518 22 -     12939 CAG--AATAC--AC-ATTC---T---G-----TGCTTT
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       2454 22 -     14244 CAG--AATAC--AC-ATTC---T---G-----TGCTTT
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           43853 22 -     54611 CAG--AATAC--AC-ATTC---T---G-----TGCTTT
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        1656 22 -     11566 CAG--AATAC--AC-ATTC---T---G-----TGCTTT
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     3833 22 -     15592 CAG--AATAC--AC-ATTC---T---G-----TGCTTT
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          2489 22 +     14371 CAG--AATAC--AC-ATTC---T---G-----TGCTTT
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                    770 22 +     12481 CAG--AATAC--AC-ATTC---T---G-----TGCTTT
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                         646 22 -     24393 CAG--AATAC--AC-ATTC---T---G-----TGCTTT
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       5892 22 -     28054 CAG--AATAC--AC-ATTC---T---G-----TGCTTT
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44660692 22 -  44834318 CAG--AATAC--AC-ATTC---T---G-----TGCTTT
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       3000 22 +     13828 CAG--AATAC--AC-ATTC---T---G-----TGCTTT
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   5584 21 +     90398 CAG--AGTAG--AC-ATTC---A---A-----AGT-TC
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16085399 22 +  31416278 CAC--AGTTG--GC-ATTC---T---G-----AGACTC
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2793340 22 -   3938065 CAG--AGTAG--AA-CTTT---G---G-----AACTTC
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    5540 22 +     13056 CAG--AGTAG--AA-CTTC---G---G-----AGCTTC
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69313845 22 -  96451834 CAG--AGCAG--AC-ATTC---A---G-----AGTGTC
i Tursiops_truncatus.MRVK01000923.1                     I 15 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   1748 22 +     10241 CAA--ATCAG--AC-ATTG---A---G-----AATTTC
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6515237 22 +  28682327 cag--aatac--ac-attc---a---g-----aGCCCT
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  5717 22 -     20643 CAG--AATAG--AT-ATTC---T---G-----AGCTGC
i Varecia_rubra.k141_432109                             I 7 C 0
s Varecia_variegata.k141_775891                             25258 22 -     33872 CAG--AATAG--AT-ATTC---T---G-----AGCTGC
i Varecia_variegata.k141_775891                         I 7 C 0
s Vicugna_pacos.KN269600.1                                1525093 21 -   2331223 CAG--AGTAG--AC-ATT----A---G-----ACTGTC
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                138727 22 -    281493 CAG--AATAG--AC-ATTC---A---G-----AGCTCC
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       127304 22 -    134049 CAG--ACTAG--AT-A---TTGT---A-----AGATCC
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        214710 22 -    227762 CAA--AATAG--AC-ATTC---A---G-----AGCTCC
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     15990  8 -     20485 gag--agtag----------------------------
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 I 19
s Ziphius_cavirostris.ZipCav_flattened_line_127025           7344 22 -      8775 CAG--AGCAG--AC-ACTC---A---G-----AGTGTC
i Ziphius_cavirostris.ZipCav_flattened_line_127025      I 15 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                701732 90 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             39133 29 -     47444 I
e Sorex_araneus.JH798170.1                               17766452 15 -  27805282 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Megaderma_lyra.MegLyr_scaffold_3562                       64783 239 -    234502 I
e Elephantulus_edwardii.JH947210.1                        7816099 793 +  15467074 I
e Crocidura_indochinensis.CroInd_scaffold_848148              199  0 +      1327 C
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1008 325 -      5782 I
e Hylobates_klossii.k141_285563                               343 193 +      1026 I
e Microtus_ochrogaster.CM001673.1                        22820341  4 -  98408828 I
e Rattus_norvegicus.chr11                                13915860 1475 +  90463843 I
e Ondatra_zibethicus.OndZib_scaffold_6821                  125594  4 +    145789 I
e Graphiurus_murinus.GraMur_scaffold_4493                   77863  0 +    118900 C
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I
e Ellobius_talpinus.LOJH01090055.1                           7151  4 -      7838 I
e Ellobius_lutescens.LOEQ01003611.1                        240029  1 -    369425 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               12296  8 +    209709 CACTT------TA-C
s Acinonyx_jubatus.LLWD01000356.1                         2034430  8 +   3721120 CACTT------TG-C
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    113003  8 -    189883 TATAC------TG-T
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10657766  8 +  23371972 CACTT------TG-C
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7095114  8 -  16596857 CACTT------TG-C
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   17325  8 -     22067 TATGT------TA-T
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   1811  8 -     60446 CACTT------TA-C
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         2531  8 -     29318 CACTT------TA-C
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         1466  8 +     38766 CACTT------TA-C
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          2425  8 -     80423 CACTT------TA-C
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            10728  8 -     18050 CACTT------TA-C
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_1710068                                443  8 +      1555 CACTT------TA-C
i Alouatta_caraya.k141_1710068                          C 0 C 0
s Alouatta_discolor.k141_811576                             11401  8 -     21359 CACTT------TA-C
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                1022  8 +      2129 CACTT------TA-C
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_2177643                           406  8 -      1868 CACTT------TA-C
i Alouatta_macconnelli.k141_2177643                     C 0 C 0
s Alouatta_nigerrima.k141_3537692                             455  8 +      1660 CACTT------TA-C
i Alouatta_nigerrima.k141_3537692                       C 0 C 0
s Alouatta_palliata.k141_2764429                              370  8 -      1480 CACTT------TA-C
i Alouatta_palliata.k141_2764429                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            4448  8 -      4927 CACTT------TA-C
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_1531728                             585  8 -      1692 CACTT------TA-C
i Alouatta_seniculus.k141_1531728                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3520565  8 +   4113121 CAACT------TG-C
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      390972  8 -    631301 TACTT------TG-C
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            31148  8 +     33004 CAACT------TG-C
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 63080  8 +     78111 CACTT------TA-C
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            6022  8 +     22701 CACTT------TA-C
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5749979  8 +   9889416 CACTT------TA-C
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             6568  8 -    104377 CACTT------TA-C
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               6570  8 +     23246 CACTT------TA-C
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     4124  8 +      5067 CACTT------TT-T
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        1477  8 +      9265 TCCTT------TT-C
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 9389  8 -     29036 TACTT------CG-C
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9539839  8 +  39197703 CACTT------TA-C
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             61110  8 +     85812 CACTT------TA-C
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                12123  8 +     89302 CACTT------TA-C
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             16626  8 -     58268 CACTT------TA-C
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             64618  8 +    119057 CACTT------TA-C
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               6589  8 -     25888 CACTT------TA-C
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 7205  8 -     16375 GATTT------TG-T
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                                823  8 +      6337 GATTT------TG-T
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26380640  8 +  51448160 CAATT------TG-C
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        5812  8 -     13118 CAATT------TG-C
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   43635  8 -     72089 CAACT------TG-C
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 I 41
s Bison_bison.KN264915.1                                  6560297  8 +   6870073 CAACT------TG-C
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138140406  8 - 161108492 CAACT------TG-C
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     572947  8 -    998990 CAACT------TG-C
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136296139  8 - 158972876 CAACT------TG-C
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1233219  8 -   1914593 CAACT------TG-C
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               114476  8 -    171031 CACTT------TA-C
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 13505  8 +    125063 CACTT------TA-C
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                15548  8 -    216513 CACTT------TA-C
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        8091  8 -    134917 CACTT------TA-C
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3220009  8 -   8989139 CACTT------TG-C
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           397710  8 -  15254737 CACTT------TG-C
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2973446  8 +   6889770 CACTT------TG-C
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11519912  8 +  39901454 AACTT------TG-C
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   14937  8 +     87036 AACTT------TG-C
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11266579  8 -  35597290 AACTT------TG-C
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11089113  8 +  39895921 AACTT------TG-C
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16456128  8 -  44759192 AACTT------TG-C
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21325640  8 + 157394656 CAACT------TG-C
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135706868  8 - 157403528 CAATT------TG-C
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          309486  8 +    345090 CACTT------TT-C
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               60171  8 +     67245 TACTT------TG-C
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   31562  7 +     33760 TGCT-------TA-T
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   159328  8 -    276539 TACTC------TG-C
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15787062  8 -  24422027 CACTT------TG-C
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15798998  8 -  24440124 CACTT------TG-C
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       177189  8 +    436027 CACTT------TG-C
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18891322  8 -  29618158 CACTT------TA-C
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 8866  8 -     26817 CACTT------TA-C
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                13109  8 +     25043 CACTT------TA-C
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         8514  8 +     21754 CACTT------TT-C
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4364327  8 +   7569818 CGCTT------TG-C
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         4084  8 -      9338 CGCTT------TG-C
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6555757  8 +   6739814 CACTT------TA-C
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      27234  8 +     60454 CACTT------TA-C
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          2440  8 -     21101 CACTT------TA-C
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         59749  8 -    107033 CACTT------TA-C
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        2639  8 -     17608 CACTT------TA-C
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          30135  8 +     30494 CACTT------TA-C
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          58980  8 -     59240 CACTT------TA-C
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          2681  8 +     16677 CACTT------TA-C
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           24840  8 +     35983 CACTT------TA-C
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11991366  8 +  12117833 CACTT------TA-C
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46478126  8 +  46592721 CACTT------TA-C
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      41676  8 -     45581 CACTT------TA-C
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       2682  8 +     35577 CACTT------TA-C
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        2457  8 -     25661 CACTT------TA-C
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        2435  8 -     17744 CACTT------TA-C
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        22052  8 +     37128 CACTT------TA-C
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           3207  8 -      6963 TACTT------TG-C
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 I 3
s Cheirogaleus_major.k141_1157592                           59485  8 -     68416 GACTT------TG-T
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            8530  8 +     13308 GACTT------TG-T
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             6133  8 -     18223 CACTT------TA-C
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             23151  8 +     25473 CACTT------TA-C
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           42191  8 +     57117 CACTT------TA-C
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          46870  8 +     54541 CACTT------TA-C
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15962188  8 +  43084221 CACTT------TG-T
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         71677  8 +    196370 CACTT------TA-C
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          15857  8 +     40510 CACTT------TA-C
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15139572  8 -  15256731 CACTT------TA-A
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      34653  8 -     53260 CACTT------TA-C
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101145213  8 + 101219884 CACTT------TA-C
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                16910  8 -     21363 TAACT------TG-C
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 I 3
s Choloepus_hoffmanni.KN194586.1                           762213  8 +    964067 TAACT------TG-C
i Choloepus_hoffmanni.KN194586.1                        C 0 I 3
s Colobus_angolensis.KN985967.1                          10886977  8 +  10971483 CACTT------TA-C
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147665142  8 + 156195979 CACTT------TA-C
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            17127  8 +     23629 CACTT------TA-C
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60614040 14 +  78930452 TAACTNNNNNNAG-C
i Condylura_cristata.JH655880.1                         C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 278977  8 -    399297 CGTAT------TG-T
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53029663  8 +  72327488 TGTAT------TA-T
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            52466  8 -     70449 CACTT------TG-C
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  208874  8 -    956709 aaaaa------c-aa
i Ctenodactylus_gundi.CteGun_scaffold_447               I 230 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 31104  8 -     67205 AACTT------TG-T
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                18222  8 +     26546 CATTT------TG-C
i Cuniculus_paca.CunPac_flattened_line_16637            I 5 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             59312  8 -    236241 cactt------tg-c
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          184091  8 -   6883506 TATTT------TG-C
i Dasypus_novemcinctus.JH568778.1                       C 0 I 3
s Daubentonia_madagascariensis.ctg11                     16845352  8 +  31942871 TGCTT------TG-C
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80037264  8 -  96802777 CAATT------TG-C
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18699450  8 -  18957592 CACTT------TG-A
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 322980  8 +    993696 CACTT------TG-C
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   3631  8 +    151128 CGCTT------TG-C
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   157452  8 +    228994 CTCTT------TG-T
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3656764  5 +   4240102 CACTT----------
i Dipodomys_ordii.KN672545.1                            C 0 I 1
s Dipodomys_stephensi.DipSte_scaffold_44365                 28407  5 +     28912 CACTT----------
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 I 1
s Dolichotis_patagonum.DolPat_scaffold_14102                36536  8 -     73477 CACTT------TG-C
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22999016  8 -  44670279 CACTC------TT-C
i Echinops_telfairi.JH980316.1                          C 0 I 346
s Eidolon_helvum.KE772537.1                                 12700  8 +     24177 CAGTT------TG-G
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1491911  8 +   1727528 CAACT------TG-C
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Enhydra_lutris.KZ291749.1                              85872640  8 +  99434291 CATGT------TG-C
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4705022  8 +   6522550 CACTT------TG-C
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5853428  8 -   7175178 CACTT------TG-C
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13351933  8 +  41866177 CACTT------TG-C
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          13422  8 +     92910 CACTT------TG-C
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11534704  5 +  16010500 AA---------TG-T
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48776095  8 -  48907691 CACTT------TA-C
i Erythrocebus_patas.Contig8                            I 1757 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          315480  8 +    330699 CAATT------TG-C
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             61933  8 +     89355 CAATT------TG-C
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              5527  8 +     13586 AACTT------TC-T
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               5458  8 -      6809 AACTT------TC-T
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            11935  8 +     36558 AACTT------TC-T
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             8256  8 +     60246 AACTT------TG-T
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                11732  8 +    109717 AACTT------TC-T
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               16118  8 +     16540 AACTT------TG-T
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                16393  8 +     27497 AACTT------TC-T
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           18850  8 +     26808 AATTT------TG-T
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                33588  8 +     46535 AACTT------TC-T
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              16312  8 -     29447 AACTT------TC-T
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129893385  8 - 159252932 CACTT------TG-C
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129280477  8 - 158578461 CACTT------TG-C
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 21617  8 +     52776 CACTT------TG-C
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Galago_moholi.ctg555                                     211379  8 -    847004 TCCTT------TT-C
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           13753  8 -     43889 TCCTT------TT-C
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          10827  8 +     27357 TCCTT------TT-C
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               156746  8 +    324696 TACTT------TG-C
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    181710  8 -    189561 CAACT------TG-C
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           13505  8 -     18683 GACTT------TG-C
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               5814  8 -     14630 CACTT------TA-C
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119652914  8 - 195582420 CACTT------TA-C
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         2304  8 +     10286 AACTT------TG-T
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                              781  8 -     11661 AACTT------TG-T
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             6110  8 +     56096 AACTT------TG-T
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        29361  8 -     42470 AACTT------TG-T
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        45984  8 -     54384 AACTT------TG-T
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              17672  8 +     53719 CACTT------TG-C
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                27925  8 -     91191 CAACT------TG-C
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2551543  8 +  31725842 CACTT------TG-C
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              147571  8 +    277961 CAATC------TG-C
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      278839  8 -    477199 CACTG------TG-T
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              7985  8 -      9143 CACTG------TG-T
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      5501  8 -   7690867 CACTT------TA-C
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 17742  8 -     67322 CACTT------TC-C
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19443  8 -    119109 cactt------tg-a
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_164775                               305  8 -      2073 CACTT------TA-C
i Hylobates_abbotti.k141_164775                         C 0 C 0
s Hylobates_agilis.k141_1878600                               542  8 -      1230 CACTT------TA-C
i Hylobates_agilis.k141_1878600                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14625195  8 -  25970782 CACTT------TA-C
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            2451  8 -      2977 CACTT------TA-C
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             34354  8 -     60944 CACTT------TA-C
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     6613  8 +     22540 CACTT------TG-C
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7126295  8 +  13083262 CACTT------TG-T
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_5141390                                    838  8 -      3181 GACTT------TG-T
i Indri_indri.k141_5141390                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               9469  8 +     17520 CAATT------TG-C
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8566339  8 +  11848649 TATAT------TG-T
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               24079  8 +     37189 CAATT------TG-C
i Kogia_breviceps.KogBre_flattened_line_35920           I 5 C 0
s Lagothrix_lagothricha.k141_12968                          50708  8 -    147782 CACTT------TA-C
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                     778  8 +     26176 CACTT------TG-C
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258407665  8 - 285822530 AACTT------TG-T
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        24423  8 +     39228 GACTT------TG-T
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            53807  8 +     63517 GACTT------TG-T
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        79071  8 +    116806 GACTT------TG-T
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     32062  8 -     33031 GACTT------TG-T
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3086432  8 -   3498232 CACTT------TG-C
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    13715  8 +     22452 CACTT------TG-C
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            136425  8 +   3060487 CAATT------TG-C
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19248851  8 +  19376315 CACTT------TA-C
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           11128  8 +     84689 TCCTT------TT-C
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3778877  8 +   6799190 TCCTT------TT-C
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20594746  8 -  62548349 CACTT------TG-C
i Loxodonta_africana.GL010040.1                         C 0 I 358
s Lycaon_pictus.CM007556.1                               11088569  8 +  39895028 AACTT------TG-C
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             20586  8 +     74745 CACTT------TA-C
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12707043  8 +  12821369 CACTT------TA-C
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                2685  8 -      3136 CACTT------TA-C
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           47500  8 +     63263 GACTT------TA-C
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                 2208  8 -      2568 CACTT------TA-C
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 2793  8 -      7381 CACTT------TA-C
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  46010  8 -     79256 CACTT------TA-C
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196036117  8 + 196197964 CACTT------TA-C
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11446287  8 +  11645122 CACTT------TA-C
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   4957  8 -     46448 CACTT------TA-C
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                2631  8 -     13212 CACTT------AA-C
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 16310  8 -     55006 CACTT------TA-C
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43841426  8 +  43892939 CACTT------TA-C
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               17596  8 -     24607 CACTT------AA-C
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               4962  8 -     27140 CACTT------TA-C
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43438011  8 -  43563597 CACTT------TA-C
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4450831  8 -   4543643 CACTT------TA-C
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            146512  8 +    252755 CACTT------TG-C
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             36655  8 +     58827 CACTT------TG-C
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36874119  8 +  64221397 CACTT------TG-T
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             1452  8 -     87323 CATGT------TG-C
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               13382  8 +     15977 TGTAA------TA-T
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1047349  8 -  26018355 TGTCT------TA-T
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_227248                    753  8 -      1377 CAATT------TG-C
i Mesoplodon_bidens.MesBid_scaffold_227248              C 0 C 0
s Microcebus_murinus.CM007691.1                          16510697  8 +  47401472 GACTT------TG-T
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  35027  8 -     48017 CACTC------TT-C
i Microgale_talazaci.MicTal_scaffold_34660              C 0 I 336
s Micronycteris_hirsuta.MicHir_scaffold_37978               23362  8 -     32043 CACTT------TA-C
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8210520  8 +  10048721 CACTT------TG-C
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            35009  8 +     45743 CACTT------TG-C
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         2560  8 +     29742 CACTT------TA-C
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        11948  8 -    104932 CACTT------TG-C
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     6085  8 +      8497 GACTT------TA-T
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 146854  8 +    154973 CAATT------TG-C
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                161882  8 +    265003 CACTT------TT-C
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  1941  8 -     19904 CAACT------TG-C
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  145367  8 -    168139 CACTC------TG-C
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          19984  8 -    100666 CACTT------TG-C
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70766983  8 +  92629107 CATAT------TG-T
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75490043  8 +  98207768 CATAT------TG-T
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67556281  8 +  89017189 CATAT------TG-T
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74331218  8 +  97876770 CATAT------TG-T
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             12258  8 +     98495 AACTT------TG-C
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4424821  8 -  28371801 CACGT------TG-C
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     90395  8 -    117718 CACTT------TG-T
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               968295  8 +   8389877 CACTG------TG-C
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5019968  8 +   6462685 CACTG------TG-C
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3465877  8 -   3747815 TACTG------TG-C
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        11087  8 +     66751 CACTG------TG-C
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             5477  8 -      8794 GACTA------TG-T
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 I 3
s Nasalis_larvatus.k141_153429                               9067  8 +     48152 CACTT------TA-C
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4485338  8 -  14209539 CACTT------TG-C
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3951466  8 -   4490290 CAATT------TG-C
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Nomascus_annamensis.k141_720788                             449  8 -      1065 CACTT------TA-C
i Nomascus_annamensis.k141_720788                       I 22 C 0
s Nomascus_concolor.k141_581629                                12  8 -      6578 CACTT------TA-C
i Nomascus_concolor.k141_581629                         n 126 C 0
s Nomascus_gabriellae.k141_1004198                            320  8 +      1448 CACTT------TA-C
i Nomascus_gabriellae.k141_1004198                      C 0 C 0
s Nomascus_siki_b.tarseq_80                             25471  8 -  18771707 CACTT------TA-C
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  3174  8 +      4512 CACTT------TA-C
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                31369  8 +   3668941 AACTT------TG-C
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65567572  8 -  95554990 TCCTT------TT-C
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            4298  8 +      6470 TCCTT------TT-C
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65669907  8 +  89412551 TCCTT------TT-C
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4996462  8 -  23139505 CACTT------CA-T
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3685927  8 +  10294119 CACTT------TG-C
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             680005  8 -   3126709 CACTT------TG-C
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1080141  8 +   1425656 CAACT------TG-C
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         37438  8 +     78940 CAACT------TG-C
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  37540  8 +     62360 TGTAT------TG-T
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7225151  8 -   7562323 CAATT------TG-C
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              58040  8 -     66828 AACTT------TG-C
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 I 313
s Oryctolagus_cuniculus.CM000803.1                      141876749  8 + 163896628 CACTT------GG-C
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      308653  8 -    505867 AACTT------TG-C
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        1197  8 -     53940 TCCTT------TT-C
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18009177  8 -  38779656 TCCTT------TT-C
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134077716  8 - 275406953 CAACT------TG-C
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      78931  8 +    140051 CAACT------TG-C
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127575180  8 - 205426864 CACTT------TA-C
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120152334  8 - 196562556 CACTT------TA-C
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  34755  8 +    295523 CACTT------TG-C
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3638489  8 +  18214204 CACTT------TG-C
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5028164  8 -   6340057 CACTT------TG-C
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1066566  8 -   1292953 CAACT------TG-A
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188156798  8 - 188283584 CACTT------TA-C
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             5115  8 +      5367 CACTT------TA-C
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47514183  8 +  47705337 CACTT------TA-C
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 68159  8 -    104429 CACTT------TA-C
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    6695  8 +     14967 CACTT------TA-C
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 2554  8 -      7628 CACTT------TA-C
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    116246  8 -    135482 CACTT------TG-C
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           5886  8 -     23713 TCCTT------TT-C
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            25199  8 -     27972 TCCTT------TT-C
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359        282  5 +     49596 TTCTT----------
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 I 1
s Peromyscus_maniculatus.KI615518.1                       4950788  8 -   8017169 TGTAC------TG-T
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    13372  8 -     36578 ctcat------gg-c
i Petromus_typicus.PetTyp_scaffold_33007                C 0 I 556
s Phocoena_phocoena.PhoPho_flattened_line_11948            121756  8 -    122454 CAATT------TG-C
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1987485                           2581  8 -      5908 CACTT------TA-C
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       3205  8 -     17985 CACTT------TA-C
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            2572  8 +      7694 CACTT------TA-C
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26741050  8 +  26888534 CACTT------TA-C
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            98367  8 +    112873 CACTT------TG-C
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             44314  8 -     61926 CACTT------TA-C
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        25699  8 +     78826 CACTT------TA-C
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              9746  8 -     15800 CACTT------TA-C
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        12945  8 -     16101 CACTT------TA-C
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          6173  8 +      9673 CACTT------TA-C
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13475173  8 -  19735023 CACTT------TA-C
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           14076  8 -     31692 CACTT------TA-C
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           5842  8 +     21690 CAATT------TG-C
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       23416  8 +     44506 CACTT------TA-C
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        23628  8 +     67491 CACTT------TA-C
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      13868  8 -     98129 CACTT------TA-C
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     23468  8 +    147771 CACTT------TA-C
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        23725  8 -     23762 CACTT------TA-C
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          4187  8 -     55515 CACTT------TA-C
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         23541  8 +    152463 CACTT------TA-C
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       1258  8 -    119457 CACTT------TA-C
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         13264  8 +    134592 CACTT------TA-C
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          23851  8 -     75465 CACTT------TA-C
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              187700  8 -    373494 CACTT------TA-C
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19808348  8 +  19899266 CACTT------TA-C
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               6311  8 -     15069 CACTT------TA-C
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              6441  8 +     14865 CACTT------TA-C
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6849042  8 +  12164890 AACTT------TG-T
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     19199  8 -     30946 nnnnn------nn-n
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         4120  8 +     11805 GACTT------TG-T
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           43463  8 +     52369 GACTT------TG-T
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         35850  8 -     44753 GACTT------TG-T
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            17774  8 +     27322 GACTT------TG-T
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       17410  8 -     53241 GACTT------TG-T
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         39674  8 -     48185 GACTT------TG-T
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           35665  8 +     77221 TGTAA------TA-T
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            4522  8 -     27784 CACTT------TG-C
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        247131  8 -    344369 CATGT------TG-C
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13246437  8 -  17261082 CACTT------TG-T
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             604388  8 -   3946241 CACTT------TG-T
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131534769  8 - 161321710 CACTT------TG-C
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             30432  8 +     56732 CACTT------TA-C
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6806920  8 +   6970761 CACTT------TA-C
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             6311  8 +     18040 CACTT------TA-C
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                16238  8 +     68503 CAACT------TG-C
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1788263  8 +   2252614 CACTT------TG-T
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                             721  8 -     17045 CACTT------TA-C
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206378198  8 - 206558726 CACTT------TA-C
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44857112  8 -  45163003 CACTT------TA-C
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                19770  8 +    109198 CACTT------TG-T
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       8392  8 +     12214 CAACT------TG-C
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15673278  8 -  43202129 AACTT------TA-C
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        5191  8 +     34089 AACTT------TA-C
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              5133  8 -     60842 AACTT------TA-C
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              5226  8 +     67014 AACTT------TA-C
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              5204  8 +     60816 AACTT------TA-C
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 5141  8 -     76454 AACTT------TA-C
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17341866  8 -  30362882 CACTT------TA-C
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         21227  8 -     62485 CACTT------TA-C
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   32727  7 -    114521 CAC--N-----AG-C
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        3924  8 +     15331 CACTT------TA-C
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       9317  8 +     20762 CACTT------TA-C
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         119320  8 +    130994 CACTT------TA-C
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           38106  8 +     46263 CACTT------TA-C
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     31226  8 +     42640 CACTT------TA-C
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        14266  8 +     30600 CACTT------TA-C
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  100729  8 -    120886 TGTGT------TG-T
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            19332  8 +    739146 CATTT------CG-C
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17766467  6 -  27805282 --ttt------at-t
i Sorex_araneus.JH798170.1                              I 15 C 0
s Spermophilus_dauricus.KZ294190.1                        2240211  8 +   2842873 CACTT------TG-T
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             235249  8 -    276980 CACTT------TG-C
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            28027  8 +     62062 CATTT------TG-C
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189272551  8 + 218635234 TACTT------TG-C
i Sus_scrofa.CM000824.4                                 I 8 C 0
s Symphalangus_syndactylus.tarseq_24                        15456  8 -  13920577 CACTT------TA-C
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                 702  8 +     20549 CACTT------TG-C
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               15142  8 +     45698 GACTA------TG-T
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 I 3
s Tapirus_indicus.TapInd_scaffold_176                      807569  8 +   1148477 CACTT------CG-T
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  58280  8 +     99546 CACTT------TG-T
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               26939  8 +     42269 CACTT------TC-T
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               60255  8 +     65473 CATTT------TC-T
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194008320  8 - 194193292 CACTT------TA-C
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  5962  8 +      6782 TACTT------TG-C
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 I 3
s Tonatia_saurophila.TonSau_scaffold_3334                  136519  8 -    259118 CACTT------TG-C
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        27422  8 +     38948 CACTT------TA-C
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   21154  8 -     32910 CACTT------TA-C
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      2540  8 -     12939 CACTT------TA-C
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       2476  8 -     14244 CACTT------TA-C
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           43875  8 -     54611 CACTT------TA-C
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        1678  8 -     11566 CACTT------TA-C
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     3855  8 -     15592 CACTT------TA-C
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          2511  8 +     14371 CACTT------TA-C
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                    792  8 +     12481 CACTT------TA-C
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                         668  8 -     24393 CACTT------TA-C
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       5914  8 -     28054 CACTT------TA-C
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44660714  8 -  44834318 CACTT------TA-C
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       3022  8 +     13828 CACTT------TA-C
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   5605  8 +     90398 CAATC------TG-C
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16085421  8 +  31416278 CACTT------Tg-c
i Trichechus_manatus.JH594618.1                         C 0 I 355
s Tupaia_chinensis.KB320831.1                             2793362  8 -   3938065 TTCTC------TG-C
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    5562  8 +     13056 TTCTC------TG-C
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69313867  8 -  96451834 CAATT------TG-C
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   1770 14 +     10241 CACTTNNNNNNTG-C
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6515259  8 +  28682327 CACTT------TG-C
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  5739  8 -     20643 AACTT------TG-T
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             25280  8 -     33872 AACTT------TG-T
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1525114  8 -   2331223 CACTT------TG-C
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                138749  8 -    281493 AACTT------TG-C
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       127326  8 -    134049 CACTT------TG-T
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        214732  8 -    227762 CACTT------TG-C
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           7366  8 -      8775 CAATT------TG-C
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                701732 90 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             39133 29 -     47444 I
e Procavia_capensis.ProCapCap_scaffold_149274                2467 1156 -      9567 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Megaderma_lyra.MegLyr_scaffold_3562                       64783 239 -    234502 I
e Heterohyrax_brucei.HetBruBak_scaffold_25354               61360 1157 +     73687 I
e Elephantulus_edwardii.JH947210.1                        7816099 793 +  15467074 I
e Crocidura_indochinensis.CroInd_scaffold_848148              199  0 +      1327 C
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1008 325 -      5782 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     15998 19 -     20485 I
e Hylobates_klossii.k141_285563                               343 193 +      1026 I
e Microtus_ochrogaster.CM001673.1                        22820341  4 -  98408828 I
e Rattus_norvegicus.chr11                                13915860 1475 +  90463843 I
e Ondatra_zibethicus.OndZib_scaffold_6821                  125594  4 +    145789 I
e Nannospalax_galili.KL201303.1                            119159  6 +    362372 I
e Graphiurus_murinus.GraMur_scaffold_4493                   77863  0 +    118900 C
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I
e Ellobius_talpinus.LOJH01090055.1                           7151  4 -      7838 I
e Ellobius_lutescens.LOEQ01003611.1                        240029  1 -    369425 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               12304 1 +    209709 A
s Acinonyx_jubatus.LLWD01000356.1                         2034438 1 +   3721120 A
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    113011 1 -    189883 C
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10657774 1 +  23371972 A
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7095122 1 -  16596857 A
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   17333 1 -     22067 A
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   1819 1 -     60446 A
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         2539 1 -     29318 A
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         1474 1 +     38766 A
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          2433 1 -     80423 A
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            10736 1 -     18050 A
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_1710068                                451 1 +      1555 A
i Alouatta_caraya.k141_1710068                          C 0 C 0
s Alouatta_discolor.k141_811576                             11409 1 -     21359 A
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                1030 1 +      2129 A
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_2177643                           414 1 -      1868 A
i Alouatta_macconnelli.k141_2177643                     C 0 C 0
s Alouatta_nigerrima.k141_3537692                             463 1 +      1660 A
i Alouatta_nigerrima.k141_3537692                       C 0 C 0
s Alouatta_palliata.k141_2764429                              378 1 -      1480 A
i Alouatta_palliata.k141_2764429                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            4456 1 -      4927 A
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_1531728                             593 1 -      1692 A
i Alouatta_seniculus.k141_1531728                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3520573 1 +   4113121 A
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      390980 1 -    631301 A
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            31156 1 +     33004 A
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 63088 1 +     78111 A
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            6030 1 +     22701 A
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5749987 1 +   9889416 A
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             6576 1 -    104377 A
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               6578 1 +     23246 A
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     4132 1 +      5067 A
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        1485 1 +      9265 A
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 9397 1 -     29036 A
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9539847 1 +  39197703 A
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             61118 1 +     85812 A
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                12131 1 +     89302 A
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             16634 1 -     58268 A
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             64626 1 +    119057 A
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               6597 1 -     25888 A
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 7213 1 -     16375 A
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                                831 1 +      6337 A
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26380648 1 +  51448160 A
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        5820 1 -     13118 A
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   43684 1 -     72089 A
i Beatragus_hunteri.BeaHun_scaffold_21644               I 41 C 0
s Bison_bison.KN264915.1                                  6560305 1 +   6870073 G
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138140414 1 - 161108492 A
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     572955 1 -    998990 A
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136296147 1 - 158972876 A
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1233227 1 -   1914593 A
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               114484 1 -    171031 A
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 13513 1 +    125063 A
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                15556 1 -    216513 A
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        8099 1 -    134917 A
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3220017 1 -   8989139 A
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           397718 1 -  15254737 A
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2973454 1 +   6889770 A
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11519920 1 +  39901454 A
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   14945 1 +     87036 A
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11266587 1 -  35597290 A
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11089121 1 +  39895921 A
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16456136 1 -  44759192 A
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21325648 1 + 157394656 A
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135706876 1 - 157403528 A
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          309494 1 +    345090 A
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               60179 1 +     67245 A
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   31569 1 +     33760 A
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   159336 1 -    276539 A
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15787070 1 -  24422027 A
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15799006 1 -  24440124 A
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       177197 1 +    436027 A
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18891330 1 -  29618158 A
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 8874 1 -     26817 A
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                13117 1 +     25043 A
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         8522 1 +     21754 A
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4364335 1 +   7569818 A
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         4092 1 -      9338 A
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6555765 1 +   6739814 A
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      27242 1 +     60454 A
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          2448 1 -     21101 A
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         59757 1 -    107033 A
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        2647 1 -     17608 A
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          30143 1 +     30494 A
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          58988 1 -     59240 A
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          2689 1 +     16677 A
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           24848 1 +     35983 A
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11991374 1 +  12117833 A
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46478134 1 +  46592721 A
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      41684 1 -     45581 A
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       2690 1 +     35577 A
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        2465 1 -     25661 A
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        2443 1 -     17744 A
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        22060 1 +     37128 A
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           59493 1 -     68416 A
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            8538 1 +     13308 A
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             6141 1 -     18223 A
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             23159 1 +     25473 A
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           42199 1 +     57117 A
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          46878 1 +     54541 A
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15962196 1 +  43084221 A
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         71685 1 +    196370 A
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          15865 1 +     40510 A
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15139580 1 -  15256731 c
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      34661 1 -     53260 A
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101145221 1 + 101219884 A
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10886985 1 +  10971483 A
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147665150 1 + 156195979 A
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            17135 1 +     23629 A
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 278985 1 -    399297 G
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53029671 1 +  72327488 T
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            52474 1 -     70449 A
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  208882 1 -    956709 a
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 31112 1 -     67205 A
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                18230 1 +     26546 A
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             59320 1 -    236241 a
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16845360 1 +  31942871 A
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80037272 1 -  96802777 A
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18699458 1 -  18957592 A
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 322988 1 +    993696 A
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   3639 1 +    151128 A
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   157460 1 +    228994 A
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3656770 1 +   4240102 A
i Dipodomys_ordii.KN672545.1                            I 1 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 28413 1 +     28912 A
i Dipodomys_stephensi.DipSte_scaffold_44365             I 1 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                36544 1 -     73477 A
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22999370 1 -  44670279 T
i Echinops_telfairi.JH980316.1                          I 346 C 0
s Eidolon_helvum.KE772537.1                                 12708 1 +     24177 A
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1491919 1 +   1727528 A
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7816892 1 +  15467074 A
i Elephantulus_edwardii.JH947210.1                      I 793 C 0
s Enhydra_lutris.KZ291749.1                              85872648 1 +  99434291 A
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4705030 1 +   6522550 A
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5853436 1 -   7175178 A
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13351941 1 +  41866177 A
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          13430 1 +     92910 A
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erythrocebus_patas.Contig8                             48776103 1 -  48907691 A
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          315488 1 +    330699 A
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             61941 1 +     89355 A
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              5535 1 +     13586 A
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               5466 1 -      6809 A
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            11943 1 +     36558 A
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             8264 1 +     60246 A
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                11740 1 +    109717 A
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               16126 1 +     16540 A
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                16401 1 +     27497 A
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           18858 1 +     26808 A
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                33596 1 +     46535 A
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              16320 1 -     29447 A
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129893393 1 - 159252932 A
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129280485 1 - 158578461 A
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 21625 1 +     52776 A
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Galago_moholi.ctg555                                     211387 1 -    847004 A
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           13761 1 -     43889 A
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          10835 1 +     27357 A
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               156754 1 +    324696 G
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    181718 1 -    189561 A
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           13513 1 -     18683 A
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               5822 1 -     14630 A
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119652922 1 - 195582420 A
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         2312 1 +     10286 A
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                              789 1 -     11661 A
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             6118 1 +     56096 A
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        29369 1 -     42470 A
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        45992 1 -     54384 A
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              17680 1 +     53719 A
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                27933 1 -     91191 A
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2551551 1 +  31725842 A
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              147579 1 +    277961 A
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      278847 1 -    477199 A
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              7993 1 -      9143 A
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      5509 1 -   7690867 A
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19451 1 -    119109 a
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_164775                               313 1 -      2073 A
i Hylobates_abbotti.k141_164775                         C 0 I 16
s Hylobates_agilis.k141_1878600                               550 1 -      1230 A
i Hylobates_agilis.k141_1878600                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14625203 1 -  25970782 A
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            2459 1 -      2977 A
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             34362 1 -     60944 A
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     6621 1 +     22540 A
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7126303 1 +  13083262 A
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 I 3
s Indri_indri.k141_5141390                                    846 1 -      3181 A
i Indri_indri.k141_5141390                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               9477 1 +     17520 A
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8566347 1 +  11848649 A
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               24087 1 +     37189 A
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          50716 1 -    147782 A
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                     786 1 +     26176 A
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258407673 1 - 285822530 A
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        24431 1 +     39228 A
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            53815 1 +     63517 A
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        79079 1 +    116806 A
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     32070 1 -     33031 A
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3086440 1 -   3498232 A
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    13723 1 +     22452 A
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            136433 1 +   3060487 A
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19248859 1 +  19376315 A
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           11136 1 +     84689 A
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3778885 1 +   6799190 A
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20595112 1 -  62548349 A
i Loxodonta_africana.GL010040.1                         I 358 I 148
s Lycaon_pictus.CM007556.1                               11088577 1 +  39895028 A
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             20594 1 +     74745 A
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12707051 1 +  12821369 A
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                2693 1 -      3136 A
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           47508 1 +     63263 A
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                 2216 1 -      2568 A
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 2801 1 -      7381 A
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  46018 1 -     79256 A
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196036125 1 + 196197964 A
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11446295 1 +  11645122 A
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   4965 1 -     46448 A
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                2639 1 -     13212 A
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 16318 1 -     55006 A
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43841434 1 +  43892939 A
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               17604 1 -     24607 A
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               4970 1 -     27140 A
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43438019 1 -  43563597 A
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4450839 1 -   4543643 A
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            146520 1 +    252755 A
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             36663 1 +     58827 A
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36874127 1 +  64221397 A
i Marmota_marmota.CZRN01000005.1                        C 0 I 3
s Mellivora_capensis.MelCap_flattened_line_15433             1460 1 -     87323 A
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               13390 1 +     15977 G
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1047357 1 -  26018355 T
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_227248                    761 1 -      1377 A
i Mesoplodon_bidens.MesBid_scaffold_227248              C 0 C 0
s Microcebus_murinus.CM007691.1                          16510705 1 +  47401472 A
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  35371 1 -     48017 T
i Microgale_talazaci.MicTal_scaffold_34660              I 336 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               23370 1 -     32043 A
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8210528 1 +  10048721 A
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            35017 1 +     45743 A
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         2568 1 +     29742 A
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        11956 1 -    104932 A
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     6093 1 +      8497 A
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 146862 1 +    154973 A
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                161890 1 +    265003 A
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  1949 1 -     19904 A
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  145375 1 -    168139 A
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          19992 1 -    100666 A
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70766991 1 +  92629107 G
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75490051 1 +  98207768 G
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67556289 1 +  89017189 G
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74331226 1 +  97876770 G
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             12266 1 +     98495 A
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4424829 1 -  28371801 A
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     90403 1 -    117718 A
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               968303 1 +   8389877 A
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5019976 1 +   6462685 A
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3465885 1 -   3747815 A
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        11095 1 +     66751 A
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Nasalis_larvatus.k141_153429                               9075 1 +     48152 A
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4485346 1 -  14209539 A
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3951474 1 -   4490290 A
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Nomascus_annamensis.k141_720788                             457 1 -      1065 A
i Nomascus_annamensis.k141_720788                       C 0 C 0
s Nomascus_concolor.k141_581629                                20 1 -      6578 A
i Nomascus_concolor.k141_581629                         C 0 C 0
s Nomascus_gabriellae.k141_1004198                            328 1 +      1448 A
i Nomascus_gabriellae.k141_1004198                      C 0 C 0
s Nomascus_siki_b.tarseq_80                             25479 1 -  18771707 A
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  3182 1 +      4512 A
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                31377 1 +   3668941 A
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65567580 1 -  95554990 A
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            4306 1 +      6470 A
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65669915 1 +  89412551 A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4996470 1 -  23139505 A
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3685935 1 +  10294119 A
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             680013 1 -   3126709 A
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1080149 1 +   1425656 A
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         37446 1 +     78940 A
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  37548 1 +     62360 G
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7225159 1 -   7562323 A
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              58361 1 -     66828 A
i Orycteropus_afer.OryAfe_flattened_line_13509          I 313 C 0
s Oryctolagus_cuniculus.CM000803.1                      141876757 1 + 163896628 A
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      308661 1 -    505867 A
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        1205 1 -     53940 A
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18009185 1 -  38779656 A
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134077724 1 - 275406953 A
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      78939 1 +    140051 A
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127575188 1 - 205426864 A
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120152342 1 - 196562556 A
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  34763 1 +    295523 A
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3638497 1 +  18214204 A
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5028172 1 -   6340057 A
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1066574 1 -   1292953 A
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188156806 1 - 188283584 A
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             5123 1 +      5367 A
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47514191 1 +  47705337 A
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 68167 1 -    104429 A
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    6703 1 +     14967 A
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 2562 1 -      7628 A
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    116254 1 -    135482 A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           5894 1 -     23713 A
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            25207 1 -     27972 A
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359        288 1 +     49596 A
i Perognathus_longimembris.PerPac_flattened_line_19359  I 1 C 0
s Peromyscus_maniculatus.KI615518.1                       4950796 1 -   8017169 G
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    13936 1 -     36578 A
i Petromus_typicus.PetTyp_scaffold_33007                I 556 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            121764 1 -    122454 A
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1987485                           2589 1 -      5908 A
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       3213 1 -     17985 A
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            2580 1 +      7694 A
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26741058 1 +  26888534 A
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            98375 1 +    112873 A
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             44322 1 -     61926 A
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        25707 1 +     78826 A
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              9754 1 -     15800 A
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        12953 1 -     16101 A
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          6181 1 +      9673 A
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13475181 1 -  19735023 A
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           14084 1 -     31692 A
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           5850 1 +     21690 A
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       23424 1 +     44506 A
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        23636 1 +     67491 A
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      13876 1 -     98129 A
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     23476 1 +    147771 A
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        23733 1 -     23762 A
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          4195 1 -     55515 A
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         23549 1 +    152463 A
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       1266 1 -    119457 A
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         13272 1 +    134592 A
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          23859 1 -     75465 A
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              187708 1 -    373494 A
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19808356 1 +  19899266 A
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               6319 1 -     15069 A
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              6449 1 +     14865 A
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6849050 1 +  12164890 A
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     19207 1 -     30946 n
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         4128 1 +     11805 A
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           43471 1 +     52369 A
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         35858 1 -     44753 A
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            17782 1 +     27322 A
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       17418 1 -     53241 A
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         39682 1 -     48185 A
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           35673 1 +     77221 G
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            4530 1 -     27784 A
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        247139 1 -    344369 A
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13246445 1 -  17261082 A
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             604396 1 -   3946241 A
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131534777 1 - 161321710 A
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             30440 1 +     56732 A
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6806928 1 +   6970761 A
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             6319 1 +     18040 A
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                16246 1 +     68503 A
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1788271 1 +   2252614 A
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                             729 1 -     17045 A
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206378206 1 - 206558726 A
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44857120 1 -  45163003 A
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                19778 1 +    109198 G
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       8400 1 +     12214 A
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15673286 1 -  43202129 A
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        5199 1 +     34089 A
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              5141 1 -     60842 A
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              5234 1 +     67014 A
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              5212 1 +     60816 A
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 5149 1 -     76454 A
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17341874 1 -  30362882 A
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         21235 1 -     62485 A
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Semnopithecus_entellus.k141_1572367                        3932 1 +     15331 A
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       9325 1 +     20762 A
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         119328 1 +    130994 A
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           38114 1 +     46263 A
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     31234 1 +     42640 A
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        14274 1 +     30600 A
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  100737 1 -    120886 G
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2240219 1 +   2842873 A
i Spermophilus_dauricus.KZ294190.1                      C 0 I 3
s Spilogale_gracilis.SpiGra_flattened_line_905             235257 1 -    276980 A
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            28035 1 +     62062 A
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189272559 1 + 218635234 A
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        15464 1 -  13920577 A
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                 710 1 +     20549 A
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      807577 1 +   1148477 A
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  58288 1 +     99546 A
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               26947 1 +     42269 A
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               60263 1 +     65473 A
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194008328 1 - 194193292 A
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             39162 1 -     47444 A
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         I 29 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  136527 1 -    259118 A
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        27430 1 +     38948 A
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   21162 1 -     32910 A
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      2548 1 -     12939 A
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       2484 1 -     14244 A
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           43883 1 -     54611 A
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        1686 1 -     11566 A
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     3863 1 -     15592 A
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          2519 1 +     14371 A
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                    800 1 +     12481 A
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                         676 1 -     24393 A
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       5922 1 -     28054 A
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44660722 1 -  44834318 A
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       3030 1 +     13828 A
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   5613 1 +     90398 A
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16085784 1 +  31416278 A
i Trichechus_manatus.JH594618.1                         I 355 I 8
s Tupaia_chinensis.KB320831.1                             2793370 1 -   3938065 A
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    5570 1 +     13056 A
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69313875 1 -  96451834 A
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Ursus_maritimus.KK498671.1                              6515267 1 +  28682327 A
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  5747 1 -     20643 A
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             25288 1 -     33872 A
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1525122 1 -   2331223 A
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                138757 1 -    281493 A
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       127334 1 -    134049 A
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        214740 1 -    227762 A
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           7374 1 -      8775 A
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                701732 90 +    802869 I
e Sorex_araneus.JH798170.1                               17766473 0 -  27805282 C
e Erinaceus_europaeus.JH835290.1                         11534709 0 +  16010500 C
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           3215 3 -      6963 I
e Uropsilus_gracilis.UroGra_scaffold_69449                   1784 0 +     10241 C
e Tolypeutes_matacus.TolMat_scaffold_269431                  5970 3 +      6782 I
e Tamandua_tetradactyla.TamTet_scaffold_26877               15150 3 +     45698 I
e Solenodon_paradoxus.SolPar_flattened_line_1012            19340 0 +    739146 C
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   32734 0 -    114521 C
e Procavia_capensis.ProCapCap_scaffold_149274                2467 1156 -      9567 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             5485 3 -      8794 I
e Megaderma_lyra.MegLyr_scaffold_3562                       64783 239 -    234502 I
e Hyaena_hyaena.HyaHya_flattened_line_20729                 17750 0 -     67322 C
e Heterohyrax_brucei.HetBruBak_scaffold_25354               61360 1157 +     73687 I
e Dasypus_novemcinctus.JH568778.1                          184099 3 -   6883506 I
e Crocidura_indochinensis.CroInd_scaffold_848148              199 0 +      1327 C
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1008 325 -      5782 I
e Condylura_cristata.JH655880.1                          60614054 0 +  78930452 C
e Choloepus_hoffmanni.KN194586.1                           762221 3 +    964067 I
e Choloepus_didactylus.ChoDid_scaffold_36182                16918 3 -     21363 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     15998 19 -     20485 I
e Hylobates_klossii.k141_285563                               343 193 +      1026 I
e Microtus_ochrogaster.CM001673.1                        22820341 4 -  98408828 I
e Rattus_norvegicus.chr11                                13915860 1475 +  90463843 I
e Ondatra_zibethicus.OndZib_scaffold_6821                  125594 4 +    145789 I
e Nannospalax_galili.KL201303.1                            119159 6 +    362372 I
e Graphiurus_murinus.GraMur_scaffold_4493                   77863 0 +    118900 C
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I
e Ellobius_talpinus.LOJH01090055.1                           7151 4 -      7838 I
e Ellobius_lutescens.LOEQ01003611.1                        240029 1 -    369425 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               12305 16 +    209709 A-AAG-C--T---AC--A--------CATAAAT
s Acinonyx_jubatus.LLWD01000356.1                         2034439 16 +   3721120 A-TA-GC--T---GC--G--------CGGAAAT
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    113012 16 -    189883 A-TAG-G--T---GA--A--------CCTAATT
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10657775 16 +  23371972 A-TA-GC--T---GC--A--------CATAAAT
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7095123 16 -  16596857 A-TA-GC--T---GC--A--------CATAAAT
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   17334 16 -     22067 A-TGG-T--T---GA--A--------TATAAAT
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   1820 16 -     60446 A-AAG-C--T---AC--A--------CATAAAT
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         2540 16 -     29318 A-AAG-C--T---AC--A--------CATAAAT
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         1475 16 +     38766 A-AAG-C--T---AC--A--------CATAAAT
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          2434 16 -     80423 A-AAG-C--T---AC--A--------CATAAAT
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            10737 16 -     18050 A-AAG-C--T---AA--A--------CATAAAT
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_1710068                                452 16 +      1555 A-AAG-C--T---AC--A--------CATAAAT
i Alouatta_caraya.k141_1710068                          C 0 C 0
s Alouatta_discolor.k141_811576                             11410 16 -     21359 A-AAG-C--T---AA--A--------CATAAAT
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                1031 16 +      2129 A-AAG-C--T---AC--A--------CATAAAT
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_2177643                           415 16 -      1868 A-AAG-C--T---AC--A--------CATAAAT
i Alouatta_macconnelli.k141_2177643                     C 0 C 0
s Alouatta_nigerrima.k141_3537692                             464 16 +      1660 A-AAG-C--T---AC--A--------CATAAAT
i Alouatta_nigerrima.k141_3537692                       C 0 C 0
s Alouatta_palliata.k141_2764429                              379 16 -      1480 A-AAG-C--T---AA--A--------CATAAAT
i Alouatta_palliata.k141_2764429                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            4457 16 -      4927 A-AAG-C--T---AC--A--------CATAAAT
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_1531728                             594 16 -      1692 A-AAG-C--T---AA--A--------CATAAAT
i Alouatta_seniculus.k141_1531728                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3520574 16 +   4113121 T-TA-AA--T---GT--A--------GCTAAAT
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      390981 16 -    631301 AAAA--T--T---GT--A--------CATAAAT
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            31157 16 +     33004 T-TA-AT--T---GT--A--------GATAAAT
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 63089 15 +     78111 A-AAG-C--T---AC--A--------CATAAA-
i Aotus_azarae.k141_3170768                             C 0 I 1
s Aotus_griseimembra.k141_3275623                            6031 15 +     22701 A-AAG-C--C---AC--A--------CATAAA-
i Aotus_griseimembra.k141_3275623                       C 0 I 1
s Aotus_nancymaae.KZ196176.1                              5749988 15 +   9889416 A-AAG-C--T---AC--A--------CATAAA-
i Aotus_nancymaae.KZ196176.1                            C 0 I 1
s Aotus_trivirgatus.k141_1740727                             6577 15 -    104377 A-AAG-C--T---AC--A--------CATAAA-
i Aotus_trivirgatus.k141_1740727                        C 0 I 1
s Aotus_vociferans.k141_718647                               6579 15 +     23246 A-AAG-C--T---AC--A--------CATAAA-
i Aotus_vociferans.k141_718647                          C 0 I 1
s Aplodontia_rufa.AprRuf_scaffold_156013                     4133 16 +      5067 A-TAG-C--T---TC--A--------CATAAAT
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        1486 16 +      9265 A-TGG-C--G---GC--A--------CATAAAT
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 9398 19 -     29036 AAAA--C--GGCAGC--A--------CATGAAT
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9539848 16 +  39197703 A-AAG-C--T---AC--A--------CGTAAAT
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             61119 16 +     85812 A-AAG-C--T---AC--A--------CGTAAAT
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                12132 16 +     89302 A-AAG-C--T---AC--A--------CGTAAAT
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             16635 16 -     58268 A-AAG-C--T---AC--A--------CGTAAAT
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             64627 16 +    119057 A-AAG-C--T---AC--A--------TGTAAAT
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               6598 16 -     25888 A-AGG-C--T---AC--A--------CGTAAAT
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 7214 16 -     16375 A-TAG-C--T---GC--A--------CATAAAT
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                                832 16 +      6337 A-CAG-C--T---GC--A--------CATAAAT
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26380649 15 +  51448160 T-TA--C--T---GT--A--------CATAAAT
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        5821 15 -     13118 T-TA--C--T---GT--A--------CATAAAT
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   43685 16 -     72089 G-TA-AA--T---GT--A--------GATAAAT
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6560306 16 +   6870073 T-TA-AT--T---GT--A--------GATAAAT
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138140415 16 - 161108492 T-TA-AT--T---GT--A--------GATAAAT
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     572956 16 -    998990 T-TA-AT--T---GT--A--------GATAAAT
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136296148 16 - 158972876 T-TA-AT--T---GT--A--------GATAAAT
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1233228 16 -   1914593 T-TA-AT--T---GT--A--------GATAAAC
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               114485 16 -    171031 A-AAG-C--T---AC--A--------CATAAAT
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 13514 16 +    125063 A-AAG-C--T---AC--A--------CATAAAT
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                15557 16 -    216513 A-AAG-C--T---AC--A--------CATAAAT
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        8100 16 -    134917 A-AAG-C--T---AC--A--------CATAAAT
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3220018 16 -   8989139 A-TA-GC--T---GT--A--------CATAAAT
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           397719 16 -  15254737 A-TA-GC--T---GT--A--------CATAAAT
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2973455 16 +   6889770 A-TA-GC--T---GT--A--------CATAAAT
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11519921 16 +  39901454 A-TA-GC--T---GC--A--------CATAAAT
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   14946 16 +     87036 A-TA-GC--T---GC--A--------CATAAAT
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11266588 16 -  35597290 A-TA-GC--T---GC--A--------CATAAAT
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11089122 16 +  39895921 A-TA-GC--T---GC--A--------CATAAAT
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16456137 16 -  44759192 A-TA-GC--T---GC--A--------CATAAAT
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21325649 16 + 157394656 T-TA-AA--T---GT--A--------GATAAAT
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135706877 16 - 157403528 T-TA-AA--T---GT--A--------GATAAAT
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          309495 16 +    345090 A-TTG-T--T---GC--A--------CATAAAT
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               60180 16 +     67245 AAAA--C--T---GC--A--------CATAAAT
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   31570 16 +     33760 T-TAG-C--T---CC--A--------CATAAAT
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   159337 16 -    276539 G-TA-GC--T---GT--A--------CATAAAT
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15787071 16 -  24422027 A-TAG-T--T---Gg--a--------catgaat
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15799007 16 -  24440124 A-TAG-C--T---Gg--a--------catgaat
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       177198 16 +    436027 A-TAG-C--T---GG--A--------CATGAAT
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18891331 15 -  29618158 A-AAG-C--T---AC--A--------TATAAA-
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 8875 15 -     26817 A-AAG-C--T---AC--A--------TATAAA-
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                13118 15 +     25043 A-AAG-C--T---AC--A--------TATAAA-
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         8523 16 +     21754 A-TTG-T--T---GC--A--------CATAAAT
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4364336 16 +   7569818 A-TA-GC--T---GC--A--------CGTAAAT
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         4093 16 -      9338 A-TA-GC--T---GC--A--------CGTAAAT
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6555766 16 +   6739814 A-AAG-C--T---AC--A--------CATAAAT
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      27243 16 +     60454 A-AAG-C--T---AC--A--------CATAAAT
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          2449 16 -     21101 A-AAG-C--T---AC--A--------CATAAAT
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         59758 16 -    107033 A-AAG-C--T---AC--A--------CATAAAT
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        2648 16 -     17608 A-AAG-C--T---AC--A--------CATAAAT
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          30144 16 +     30494 A-AAG-C--T---AC--A--------CATAAAT
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          58989 16 -     59240 A-AAG-C--T---AC--A--------CATAAAT
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          2690 16 +     16677 A-AAG-C--T---AC--A--------CATAAAT
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           24849 16 +     35983 A-AAG-C--T---AC--A--------CATAAAT
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11991375 16 +  12117833 A-AAG-C--T---AC--A--------CATAAAT
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46478135 16 +  46592721 A-AAG-C--T---AC--A--------CATAAAT
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      41685 16 -     45581 A-AAG-C--T---AC--A--------CATAAAT
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       2691 16 +     35577 A-AAG-C--T---AC--A--------CATAAAT
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        2466 16 -     25661 A-AAG-C--T---AC--A--------CATAAAT
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        2444 16 -     17744 A-AAG-C--T---AC--A--------CATAAAT
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        22061 16 +     37128 A-AAG-C--T---AC--A--------CATAAAT
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           3218 11 -      6963 ---------A---GC--C--------CATAAAT
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      I 3 C 0
s Cheirogaleus_major.k141_1157592                           59494 16 -     68416 A-GAG-C--T---GC--A--------CATAAAT
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            8539 16 +     13308 A-TAG-C--T---GC--A--------CATAAAT
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             6142 16 -     18223 A-AAG-C--T---AC--A--------CATAAAT
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             23160 16 +     25473 A-AAG-C--T---AC--A--------CATAAAT
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           42200 16 +     57117 A-AAG-C--T---AC--A--------CATAAAT
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          46879 16 +     54541 A-AAG-C--T---AC--A--------CATAAAT
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15962197 14 +  43084221 A-TAG-C--T---GC--A--------CATAA--
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         71686 16 +    196370 A-AAG-C--T---AC--A--------CATAAAT
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          15866 16 +     40510 A-AAG-C--T---AC--A--------CATAAAT
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15139581 16 -  15256731 a-agg-g--t---ac--t--------tttcaag
i Chlorocebus_aethiops.ctg22                            C 0 I 466
s Chlorocebus_pygerythrus.k141_1486215                      34662 16 -     53260 A-AAG-C--T---AC--A--------CATAAAT
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101145222 16 + 101219884 A-AAG-C--T---AC--A--------CATAAAT
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                16921 11 -     21363 ---------A---GC--A--------CATAAAT
i Choloepus_didactylus.ChoDid_scaffold_36182            I 3 C 0
s Choloepus_hoffmanni.KN194586.1                           762224 11 +    964067 ---------A---GC--A--------CATAAAT
i Choloepus_hoffmanni.KN194586.1                        I 3 C 0
s Colobus_angolensis.KN985967.1                          10886986 16 +  10971483 A-AAG-C--T---AC--A--------TATAAAT
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147665151 16 + 156195979 A-AAG-C--T---AC--A--------TATAAAT
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            17136 16 +     23629 A-AAG-C--T---AC--A--------TATAAAT
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60614054 11 +  78930452 ---------A---GC--A--------TATAAAT
i Condylura_cristata.JH655880.1                         C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 278986 16 -    399297 A-TAC-A--T---GA--G--------CAAAAAT
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53029672 16 +  72327488 A-AAG-A--T---AA--G--------CATAAAT
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            52475 16 -     70449 G-TA-GC--T---GC--A--------CAGAAAT
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  208883 16 -    956709 a-TAT-C--T---GC--A--------TATAAAT
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 31113 16 -     67205 A-TAG-C--T---GC--A--------TATAAAT
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                18231 16 +     26546 A-CAG-C--T---AC--A--------CATAAAT
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             59321 16 -    236241 a-tag-c--t---gc--a--------cataaat
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          184102 11 -   6883506 ---------A---GC--C--------CATAAAC
i Dasypus_novemcinctus.JH568778.1                       I 3 C 0
s Daubentonia_madagascariensis.ctg11                     16845361 16 +  31942871 A-TAG-C--T---GC--A--------CATAAAT
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80037273 15 -  96802777 T-TA--C--T---GT--A--------CATAAAT
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18699459 16 -  18957592 AAAA--C--T---GC--A--------CATAAAT
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 322989 16 +    993696 A-TA-GC--T---GC--A--------CGTAAAT
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   3640 16 +    151128 A-TA-GC--T---GC--A--------CGTAAAT
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   157461 16 +    228994 A-TAG-C--T---GC--A--------CATAAAT
i Dinomys_branickii.DinBra_scaffold_1996                C 0 I 1
s Dipodomys_ordii.KN672545.1                              3656771 16 +   4240102 A-TAT-C--T---CT--G--------CATAAAT
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 28414 16 +     28912 A-TAT-C--T---CT--G--------CATAAAT
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                36545 16 -     73477 A-TAG-C--T---GC--A--------CATAAAT
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22999371 21 -  44670279 A-TAG-C--T---AG--ATTCTTTTTCATA---
i Echinops_telfairi.JH980316.1                          C 0 I 3
s Eidolon_helvum.KE772537.1                                 12709 16 +     24177 ATAG--C--T---GC--A--------CATAAAT
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1491920 16 +   1727528 T-TA-AC--T---GT--A--------GATAAAT
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7816893 16 +  15467074 G-TAG-C--T---GC--A--------CTTAAAC
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85872649 16 +  99434291 A-TG-GC--T---AC--A--------CATAAAT
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4705031 15 +   6522550 TTAG--C--T---GC--A--------CATA-AT
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5853437 16 -   7175178 G-TA-GC--T---GC--C--------CATAGAT
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13351942 16 +  41866177 G-TA-GC--T---GC--C--------CATAGAT
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          13431 16 +     92910 G-TA-GC--T---GC--C--------CATAGAT
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11534709 11 +  16010500 ---------T---GT--a--------catagat
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48776104 16 -  48907691 A-AAG-C--T---AC--A--------CATAAAT
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          315489 15 +    330699 T-TA--C--T---GT--A--------CATAAAT
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             61942 15 +     89355 T-TA--C--T---GT--A--------CATAAAT
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              5536 16 +     13586 A-TAG-A--T---GC--A--------CAAAAAT
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               5467 16 -      6809 A-TAG-A--T---GC--A--------CATAAAT
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            11944 16 +     36558 A-TAG-A--T---GC--A--------CATAAAT
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             8265 16 +     60246 A-TAG-A--T---GC--A--------CATAAAT
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                11741 16 +    109717 A-TAG-A--T---GC--A--------CAAAAAT
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               16127 16 +     16540 A-TAG-A--T---GC--A--------CATAAAT
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                16402 16 +     27497 A-TAG-A--T---GC--A--------CAAAAAT
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           18859 16 +     26808 A-TAG-A--T---GC--A--------CATAAAT
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                33597 16 +     46535 A-TAG-A--T---GC--A--------CAAAAAT
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              16321 16 -     29447 A-TAG-A--T---GC--A--------CAAAAAT
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129893394 16 - 159252932 A-TA-GC--T---GC--G--------CGGAAAT
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129280486 16 - 158578461 A-TA-GC--T---GC--G--------CGGAAAT
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 21626 16 +     52776 A-TA-GC--T---GC--G--------CGGAAAT
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Galago_moholi.ctg555                                     211388 16 -    847004 A-CAG-A--G---GC--A--------CCTAAAT
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           13762 16 -     43889 A-CAG-A--G---GC--A--------CCTAAAT
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          10836 16 +     27357 A-CAG-A--G---GC--A--------CATAAAT
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               156755 16 +    324696 A-TAG-C--T---GC--A--------AATAAAT
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    181719 16 -    189561 T-TA-AT--T---GT--A--------GATAAAT
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           13514 16 -     18683 A-CAC-C--T---GT--C--------TATACAT
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               5823 16 -     14630 A-AAG-C--T---AC--A--------CATAAAT
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119652923 16 - 195582420 A-AAG-C--T---AC--A--------CATAAAT
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         2313 16 +     10286 A-TAG-A--T---GA--A--------CGTAAAT
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                              790 16 -     11661 A-TAG-A--T---GA--A--------CGTAAAT
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             6119 16 +     56096 A-TAG-A--T---GA--A--------CGTAAAT
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        29370 16 -     42470 A-TAG-A--T---GA--A--------CGTAAAT
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        45993 16 -     54384 A-TAG-A--T---GA--A--------CGTAAAT
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              17681 16 +     53719 A-TA-GC--T---GC--A--------CAGAAAT
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                27934 16 -     91191 T-TA-AA--T---GT--A--------GATATAT
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2551552 16 +  31725842 A-TAG-T--T---GC--A--------tataaat
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              147580 16 +    277961 T-TA-AC--G---GT--A--------CATAAAT
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      278848 16 -    477199 ATAG--C--T---GC--A--------CATAAAT
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              7994 16 -      9143 ATAG--C--T---GC--A--------CATACAT
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      5510 16 -   7690867 A-AAG-C--T---AC--A--------CATAAAT
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 17750 16 -     67322 A-TA-GC--T---GC--A--------TGGAAAT
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19452 16 -    119109 a-tag-c--t---gc--a--------cataaat
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              5658 16 +      5897 A-AAG-C--T---AC--A--------CATAAAT
i Hylobates_abbotti.k141_493872                         I 147 I 76
s Hylobates_agilis.k141_1878600                               551 16 -      1230 A-AAG-C--T---AC--A--------CATAAAT
i Hylobates_agilis.k141_1878600                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14625204 16 -  25970782 A-AAG-C--T---AC--A--------CATAAAT
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            2460 16 -      2977 A-AAG-C--T---AC--A--------CATAAAT
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             34363 16 -     60944 A-AAG-C--T---AC--A--------CATAAAT
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     6622 16 +     22540 A-TAG-C--A---GC--A--------CATAAAT
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7126307  7 +  13083262 --------------------------cataaat
i Ictidomys_tridecemlineatus.JH393315.1                 I 3 C 0
s Indri_indri.k141_5141390                                    847 16 -      3181 A-TAG-C--T---GC--A--------CATAAAT
i Indri_indri.k141_5141390                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               9478 15 +     17520 T-TA--C--T---GT--A--------CATAAAT
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8566348 16 +  11848649 A-TAG-G--T---CC--A--------CATAAAT
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               24088 15 +     37189 T-TA--C--T---GT--A--------CAGAAAT
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          50717 16 -    147782 A-AAG-C--T---AC--A--------CATAAAT
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                     787 15 +     26176 TTAG--C--A---GT--A--------CATA-AT
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258407674 16 - 285822530 A-TAG-A--T---GC--A--------CATAAAT
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        24432 16 +     39228 A-TAG-C--T---GC--A--------CATAAAT
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            53816 16 +     63517 A-TAG-C--T---GC--A--------CATAAAT
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        79080 16 +    116806 A-TAG-C--T---GC--A--------CATAAAT
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     32071 16 -     33031 A-TAG-C--T---GC--A--------CATAAAT
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3086441 16 -   3498232 A-TA-GC--T---AC--A--------TATAAAT
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    13724 16 +     22452 G-TAG-C--T---AC--A--------CATAAAT
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            136434 15 +   3060487 T-TA--C--T---GT--A--------CATAAAT
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19248860 16 +  19376315 A-AAG-C--T---AC--A--------CATAAAT
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           11137 16 +     84689 A-TAG-C--G---GC--A--------CATAAAT
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3778886 16 +   6799190 A-TAG-C--G---GC--A--------CATAAAT
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20595261 20 -  62548349 a-tac-cacc---aggga--------caTAAAT
i Loxodonta_africana.GL010040.1                         I 148 C 0
s Lycaon_pictus.CM007556.1                               11088578 16 +  39895028 A-TA-GC--T---GC--A--------CATAAAT
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             20595 16 +     74745 A-AAG-C--T---AC--A--------CATAAAT
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12707052 16 +  12821369 A-AAG-C--T---AC--A--------CATAAAT
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                2694 16 -      3136 A-AAG-C--T---AC--A--------CATAAAT
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           47509 16 +     63263 A-AAG-C--C---AC--A--------CATAAAT
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                 2217 16 -      2568 A-AAG-C--T---AC--A--------CATAAAT
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 2802 16 -      7381 A-AAG-C--T---AC--A--------CATAAAT
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  46019 16 -     79256 A-AAG-C--T---AC--A--------CATAAAT
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196036126 16 + 196197964 A-AAG-C--T---AC--A--------CATAAAT
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11446296 16 +  11645122 A-AAG-C--T---AC--A--------CATAAAT
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   4966 16 -     46448 A-AAG-C--T---AC--A--------CATAAAT
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                2640 16 -     13212 A-AAG-C--T---AC--A--------CATAAAT
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 16319 16 -     55006 A-AAG-C--T---AC--A--------CATAAAT
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43841435 16 +  43892939 A-AAG-C--T---AC--A--------CATAAAT
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               17605 16 -     24607 A-AAG-C--T---AC--A--------CATAAAT
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               4971 16 -     27140 A-AAG-C--T---AC--A--------CATAAAT
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43438020 16 -  43563597 A-AAG-C--T---AC--A--------CATAAAT
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4450840 16 -   4543643 A-AAG-C--T---AC--A--------CATAAAT
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            146521 16 +    252755 A-TA-GC--T---GT--A--------CATAAAT
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             36664 16 +     58827 A-TA-GC--T---GC--A--------CATAAAT
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36874131  7 +  64221397 --------------------------CATAAAT
i Marmota_marmota.CZRN01000005.1                        I 3 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             1461 16 -     87323 A-TG-GC--T---AC--A--------CATAAAT
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               13391 16 +     15977 A-TAG-G--T---GA--G--------CATAAAC
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1047358 16 -  26018355 A-AGG-A--T---AA--G--------CAGATAT
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_227248                    762 15 -      1377 T-TA--T--T---GT--A--------CATAAAT
i Mesoplodon_bidens.MesBid_scaffold_227248              C 0 C 0
s Microcebus_murinus.CM007691.1                          16510706 16 +  47401472 A-TAG-C--T---GC--A--------CATAAAT
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  35372 20 -     48017 A-TAG-C--T---GG--AATTTTTTT-TTA---
i Microgale_talazaci.MicTal_scaffold_34660              C 0 I 3
s Micronycteris_hirsuta.MicHir_scaffold_37978               23371 16 -     32043 AAAA--C--T---GC--A--------CATAAAT
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8210529 16 +  10048721 ATAG--C--T---GC--A--------CATAAAT
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            35018 16 +     45743 ATAG--C--T---GC--A--------CATAAAT
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         2569 16 +     29742 A-AAG-C--T---AC--A--------CATAAAT
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        11957 16 -    104932 A-TA-GC--T---AC--A--------CATAAAT
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     6094 16 +      8497 A-TAG-C--T---GC--A--------CATAAAT
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 146863 15 +    154973 T-TA--C--T---GT--A--------CATAAAT
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                161891 16 +    265003 AGAA--C--T---AC--A--------CATAAAT
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  1950 16 -     19904 T-TA-AT--C---GT--A--------GATAAAT
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  145376 16 -    168139 A-CA-GC--T---GC--A--------CAGAAAT
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          19993 15 -    100666 TTAG--C--T---GC--A--------CATC-AT
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70766992 16 +  92629107 A-TAG-G--T---GA--G--------CACAAAT
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75490052 16 +  98207768 A-TAG-G--T---GA--G--------CACAAAT
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67556290 16 +  89017189 A-TAG-G--T---GA--G--------CACAAAT
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74331227 16 +  97876770 A-TAG-G--T---GA--G--------CACAAAT
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             12267 16 +     98495 A-TAG-C--T---AT--C--------TATATAT
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4424830 16 -  28371801 A-TG-GC--T---AC--A--------CATAAAT
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     90404 16 -    117718 T-TGG-T--T---AT--A--------CATAAAT
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               968304 15 +   8389877 TTAG--C--T---GC--A--------catc-at
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5019977 15 +   6462685 TTAG--C--T---GC--A--------CATC-AT
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3465886 15 -   3747815 TTAG--C--T---GC--A--------catc-at
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        11096 15 +     66751 TTAG--C--T---GC--A--------CATC-AT
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             5488 10 -      8794 -------------GC--A--------CAGAAAT
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        I 3 C 0
s Nasalis_larvatus.k141_153429                               9076 16 +     48152 A-AAG-C--T---AC--A--------TATAAAT
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4485347 16 -  14209539 A-TA-GC--T---AC--A--------CATAAAT
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3951475 15 -   4490290 T-TA--C--T---GT--A--------CATAAAT
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Nomascus_annamensis.k141_720788                             458 16 -      1065 A-AAG-C--T---AC--A--------CATAAAT
i Nomascus_annamensis.k141_720788                       C 0 C 0
s Nomascus_concolor.k141_581629                                21 16 -      6578 A-AAG-C--T---AC--A--------CATAAAT
i Nomascus_concolor.k141_581629                         C 0 C 0
s Nomascus_gabriellae.k141_1004198                            329 16 +      1448 A-AAG-C--T---AC--A--------CATAAAT
i Nomascus_gabriellae.k141_1004198                      C 0 C 0
s Nomascus_siki_b.tarseq_80                             25480 16 -  18771707 A-AAG-C--T---AC--A--------CATAAAT
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  3183 16 +      4512 A-AAG-C--T---AC--A--------CATAAAT
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                31378 16 +   3668941 A-TA-GC--T---GC--A--------CATAAAT
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65567581 16 -  95554990 A-TAG-C--G---AC--A--------CATGAAT
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            4307 16 +      6470 A-TAG-C--G---AC--A--------CATGAAT
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65669916 16 +  89412551 A-TAG-C--G---GC--A--------CATGAAT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4996471 16 -  23139505 G-TGT-T--G---CT--A--------GGCAAAT
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3685936 16 +  10294119 A-TAG-c--t---gt--a--------cataaat
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             680014 16 -   3126709 A-TA-GC--T---AC--A--------CATAAAT
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1080150 16 +   1425656 T-TA-AT--T---GT--A--------GAAAAAT
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         37447 16 +     78940 T-TA-AT--T---GT--A--------GATAAAT
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  37549 16 +     62360 A-TAG-A--T---AA--G--------CATAAAT
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7225160 15 -   7562323 T-TA--C--T---GT--A--------CATAAAT
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              58362 16 -     66828 A-TAA-T--T---GT--A--------CATAAAC
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141876758 16 + 163896628 G-TAG-C--T---AC--A--------CATAAAT
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      308662 16 -    505867 A-TA-GC--T---GC--A--------CATAAAT
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        1206 16 -     53940 A-CAG-A--G---GC--A--------CATAAAT
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18009186 16 -  38779656 A-CAG-A--G---GC--A--------CATAAAT
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134077725 16 - 275406953 T-TA-AA--T---GT--A--------GATAAAT
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      78940 16 +    140051 T-TA-AA--T---GT--A--------GATAAAT
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127575189 16 - 205426864 A-AAG-C--T---AC--A--------CATAAAT
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120152343 16 - 196562556 A-AAG-C--T---AC--A--------CATAAAT
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  34764 16 +    295523 A-TA-GC--T---GC--G--------CGGAAAT
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3638498 16 +  18214204 A-TA-GC--T---GC--G--------CGGAAAT
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5028173 16 -   6340057 A-TA-GC--T---GC--G--------CGGAAAT
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1066575 16 -   1292953 T-TA-AA--T---GT--A--------GATAAAT
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188156807 16 - 188283584 A-AAG-C--T---AC--A--------CATAAAT
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             5124 16 +      5367 A-AAG-C--T---AC--A--------CATAAAT
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47514192 16 +  47705337 A-AAG-C--T---AC--A--------CATAAAT
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 68168 16 -    104429 A-AAG-C--T---AC--A--------CATAAAT
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    6704 16 +     14967 A-AAG-C--T---AC--A--------CATAAAT
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 2563 16 -      7628 A-AAG-C--T---AC--A--------CATAAAT
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    116255 16 -    135482 A-TA-GG--T---GC--A--------CAGAAAT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           5895 16 -     23713 A-TAG-C--G---GC--A--------CATAAAT
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            25208 16 -     27972 A-TAG-C--G---GC--A--------CATAAAT
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359        289 16 +     49596 A-TAA-C--T---GT--G--------CATTAAT
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4950797 16 -   8017169 A-TAG-A--T---AA--G--------CATAAAT
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    13937 16 -     36578 A-TAG-T--T---GT--A--------CATGAAT
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            121765 15 -    122454 T-TA--C--T---GT--A--------CATAAAT
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1987485                           2590 16 -      5908 A-AAG-C--T---AC--A--------TATAAAT
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       3214 16 -     17985 A-AAG-C--T---AC--A--------TATAAAT
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            2581 16 +      7694 A-AAG-C--T---AC--A--------TATAAAT
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26741059 16 +  26888534 A-AAG-C--T---AC--A--------TATAAAT
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            98376 15 +    112873 TTAG--C--T---GC--A--------CATA-AT
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             44323 16 -     61926 A-AAG-C--T---AC--A--------CATAAAT
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        25708 16 +     78826 A-AAG-C--T---AC--A--------CATAAAT
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              9755 16 -     15800 A-AAG-C--T---AC--A--------CATAAAT
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        12954 16 -     16101 A-AAG-C--T---AC--A--------CATAAAT
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          6182 16 +      9673 A-AAG-C--T---AC--A--------CATAAAT
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13475182 16 -  19735023 A-AAG-C--T---AC--A--------CATAAAT
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           14085 16 -     31692 A-AAG-C--T---AC--A--------CATAAAT
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           5851 15 +     21690 T-TA--C--T---GT--A--------CATAAAT
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       23425 16 +     44506 A-AAG-C--T---AC--A--------CATAAAT
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        23637 16 +     67491 A-AAG-C--T---AC--A--------CATAAAT
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      13877 16 -     98129 A-AAG-C--T---AC--A--------CATAAAT
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     23477 16 +    147771 A-AAG-C--T---AC--A--------CATAAAT
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        23734 16 -     23762 A-AAG-C--T---AC--A--------CATAAAT
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          4196 16 -     55515 A-AAG-C--T---AC--A--------CATAAAT
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         23550 16 +    152463 A-AAG-C--T---AC--A--------CATAAAT
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       1267 16 -    119457 A-AAG-C--T---AC--A--------CATAAAT
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         13273 16 +    134592 A-AAG-C--T---AC--A--------CATAAAT
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          23860 16 -     75465 A-AAG-C--T---AC--A--------CATAAAT
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              187709 16 -    373494 A-AAG-C--T---AC--A--------TGTAAAT
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19808357 16 +  19899266 A-AAG-C--T---AC--A--------CATAAAT
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               6320 16 -     15069 A-AAG-C--T---AC--A--------TATAAAT
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              6450 16 +     14865 A-AAG-C--T---AC--A--------TATAAAT
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6849051 16 +  12164890 A-TAG-A--T---GA--A--------CATAAAT
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     19208 16 -     30946 n-nnn-n--n---nn--n--------nnnnnnn
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         4129 16 +     11805 A-TAG-C--T---GC--A--------CATAAAT
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           43472 16 +     52369 A-CAG-C--T---GC--A--------CATAAAT
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         35859 16 -     44753 A-TAG-C--T---GC--A--------CATAAAT
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            17783 16 +     27322 A-CAG-C--T---GC--A--------CATAAAT
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       17419 16 -     53241 A-TAG-C--T---GC--A--------CATAAAT
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         39683 16 -     48185 A-TAG-C--T---GC--A--------CATAAAT
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           35674 16 +     77221 A-TAG-G--T---GA--G--------CATAAAC
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            4531 16 -     27784 AGAA--C--T---GC--A--------CATAAAT
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        247140 16 -    344369 A-TG-GC--T---AC--A--------CATAAAT
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13246446 16 -  17261082 ATAG--C--T---GC--A--------CATAAAT
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             604397 16 -   3946241 ATAG--C--T---GC--A--------CATAAAT
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131534778 16 - 161321710 A-TA-GC--T---GC--G--------CGGAAAT
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             30441 16 +     56732 A-AAT-C--T---AC--A--------TGTAAAT
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6806929 16 +   6970761 A-AAT-C--T---AC--A--------TATAAAT
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             6320 16 +     18040 A-AAT-C--T---AC--A--------TATAAAT
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                16247 16 +     68503 T-TA-AT--T---GT--A--------GAAAAAT
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1788272 16 +   2252614 ATAG--C--T---GC--A--------CATAAAT
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                             730 16 -     17045 A-AAT-C--T---AC--A--------TATACAT
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206378207 16 - 206558726 A-AAT-C--T---AC--A--------TATACAT
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44857121 16 -  45163003 A-AAT-C--T---AC--A--------TATACAT
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                19779 12 +    109198 ATAG--C--T---GC--A--------CA----T
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       8401 16 +     12214 T-TA-AA--T---GT--A--------GATCAAT
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15673287 16 -  43202129 A-AAG-C--T---AC--A--------TATAAAT
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        5200 16 +     34089 A-AAG-C--T---AC--A--------TATAAAT
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              5142 16 -     60842 A-AAG-C--T---AC--A--------TATAAAT
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              5235 16 +     67014 A-AAG-C--T---AC--A--------TATAAAT
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              5213 16 +     60816 A-AAG-C--T---AC--A--------TATAAAT
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 5150 16 -     76454 A-AAG-C--T---AC--A--------TATAAAT
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17341875 16 -  30362882 A-AAG-C--T---AC--A--------TATAAAT
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         21236 16 -     62485 A-AAG-C--T---AC--A--------TATAAAT
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   32734 11 -    114521 ---------T---GC--A--------TATACAT
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        3933 16 +     15331 A-AAG-C--T---AC--A--------TATAAAT
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       9326 16 +     20762 A-AAG-C--T---AC--A--------TATAAAT
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         119329 16 +    130994 A-AAG-C--T---AC--A--------TATAAAT
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           38115 16 +     46263 A-AAG-C--T---AC--A--------TATAAAT
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     31235 16 +     42640 A-AAG-C--T---AC--A--------TATAAAT
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        14275 16 +     30600 A-AAG-C--T---AC--A--------TATAAAT
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  100738 16 -    120886 A-TAG-A--T---AA--T--------CATAAAT
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            19340 11 +    739146 ---------T---AC--A--------TATAAAT
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17766473 11 -  27805282 ---------t---at--t--------tatttat
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2240223  7 +   2842873 --------------------------cataaat
i Spermophilus_dauricus.KZ294190.1                      I 3 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             235258 16 -    276980 A-TA-GT--T---GC--A--------CATAAAT
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            28036 16 +     62062 A-TA-GC--T---GC--A--------AAGAAAT
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189272560 16 + 218635234 G-CA-GC--T---GA--A--------CATAAAT
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        15465 16 -  13920577 A-AAG-C--T---AC--A--------CATAAAT
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                 711 16 +     20549 AAAG--C--T---GC--A--------CATAAAT
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               15153 11 +     45698 ---------A---GC--A--------CAGAAAT
i Tamandua_tetradactyla.TamTet_scaffold_26877           I 3 C 0
s Tapirus_indicus.TapInd_scaffold_176                      807578 16 +   1148477 A-TA-AC--T---GC--A--------CATAAAT
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  58289 16 +     99546 A-TA-AC--T---GC--A--------CATAAAT
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               26948 16 +     42269 A-TTG-T--T---GC--A--------CATAAAT
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               60264 16 +     65473 A-TTG-T--T---AC--A--------CATAAAT
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194008329 16 - 194193292 A-AAG-C--T---AC--A--------CATAAAT
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             39163 16 -     47444 A-TAG-C--T---GT--A--------CATAAAT
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  5973 11 +      6782 ---------A---GC--C--------CATAAAT
i Tolypeutes_matacus.TolMat_scaffold_269431             I 3 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  136528 16 -    259118 AAAA--C--T---GT--A--------CATAAAT
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        27431 16 +     38948 A-AAG-C--T---AC--A--------TATAAAT
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   21163 16 -     32910 A-AAG-C--T---AC--A--------TACAAAT
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      2549 16 -     12939 A-AAG-C--T---AC--A--------TATAAAT
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       2485 16 -     14244 A-AAG-C--T---AC--A--------TATAAAT
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           43884 16 -     54611 A-AAG-C--T---AC--A--------TATAAAT
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        1687 16 -     11566 A-AAG-C--T---AC--A--------TATAAAT
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     3864 16 -     15592 A-AAG-C--T---AC--A--------TATAAAT
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          2520 16 +     14371 A-AAG-C--T---AC--A--------TATAAAT
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                    801 16 +     12481 A-AAG-C--T---AC--A--------TATAAAT
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                         677 16 -     24393 A-AAG-C--T---AC--A--------TATAAAT
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       5923 16 -     28054 A-AAG-C--T---AC--A--------TATAAAT
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44660723 16 -  44834318 A-AAG-C--T---AC--A--------TATAAAT
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       3031 16 +     13828 A-AAG-C--T---AC--A--------TATAAAT
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   5614 16 +     90398 T-TA-AC--A---GT--A--------CATAAAT
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16085793  8 +  31416278 -----------------A--------CATAAAT
i Trichechus_manatus.JH594618.1                         I 8 C 0
s Tupaia_chinensis.KB320831.1                             2793371 16 -   3938065 A-TTG-C--T---GC--A--------CATAAAT
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    5571 16 +     13056 A-TTG-C--T---GC--A--------CATAAAT
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69313876 15 -  96451834 T-CA--C--T---GT--A--------CATAAAT
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   1784  9 +     10241 ---------T---GC--A--------T--AAAT
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6515268 16 +  28682327 A-TA-GC--T---GC--A--------CAAAAAT
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  5748 16 -     20643 A-TAG-C--T---GC--A--------CATAAAT
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             25289 16 -     33872 A-TAG-C--T---GC--A--------CATAAAT
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1525123 16 -   2331223 A-TA-GC--T---GT--A--------CATAAAT
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                138758 16 -    281493 A-TA-GC--T---GC--A--------CATAAAT
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       127335 16 -    134049 A-CAG-C--T---GC--A--------CATCAAT
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        214741 16 -    227762 A-TA-GC--T---AC--A--------CATAAAT
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           7375 15 -      8775 T-TA--T--T---GT--A--------CCTAAAT
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                701732 90 +    802869 I
e Procavia_capensis.ProCapCap_scaffold_149274                2467 1156 -      9567 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Megaderma_lyra.MegLyr_scaffold_3562                       64783 239 -    234502 I
e Heterohyrax_brucei.HetBruBak_scaffold_25354               61360 1157 +     73687 I
e Crocidura_indochinensis.CroInd_scaffold_848148              199  0 +      1327 C
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1008 325 -      5782 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     15998 19 -     20485 I
e Hylobates_klossii.k141_285563                               343 193 +      1026 I
e Microtus_ochrogaster.CM001673.1                        22820341  4 -  98408828 I
e Rattus_norvegicus.chr11                                13915860 1475 +  90463843 I
e Ondatra_zibethicus.OndZib_scaffold_6821                  125594  4 +    145789 I
e Nannospalax_galili.KL201303.1                            119159  6 +    362372 I
e Graphiurus_murinus.GraMur_scaffold_4493                   77863  0 +    118900 C
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I
e Ellobius_talpinus.LOJH01090055.1                           7151  4 -      7838 I
e Ellobius_lutescens.LOEQ01003611.1                        240029  1 -    369425 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               12321 1 +    209709 C
s Acinonyx_jubatus.LLWD01000356.1                         2034455 1 +   3721120 C
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    113028 1 -    189883 A
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10657791 1 +  23371972 C
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7095139 1 -  16596857 C
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   17350 1 -     22067 C
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   1836 1 -     60446 C
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         2556 1 -     29318 C
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         1491 1 +     38766 C
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          2450 1 -     80423 C
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            10753 1 -     18050 C
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_1710068                                468 1 +      1555 C
i Alouatta_caraya.k141_1710068                          C 0 C 0
s Alouatta_discolor.k141_811576                             11426 1 -     21359 C
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                1047 1 +      2129 C
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_2177643                           431 1 -      1868 C
i Alouatta_macconnelli.k141_2177643                     C 0 C 0
s Alouatta_nigerrima.k141_3537692                             480 1 +      1660 C
i Alouatta_nigerrima.k141_3537692                       C 0 C 0
s Alouatta_palliata.k141_2764429                              395 1 -      1480 C
i Alouatta_palliata.k141_2764429                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            4473 1 -      4927 C
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_1531728                             610 1 -      1692 C
i Alouatta_seniculus.k141_1531728                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3520590 1 +   4113121 C
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      390997 1 -    631301 C
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            31173 1 +     33004 C
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 63105 1 +     78111 C
i Aotus_azarae.k141_3170768                             I 1 C 0
s Aotus_griseimembra.k141_3275623                            6047 1 +     22701 C
i Aotus_griseimembra.k141_3275623                       I 1 C 0
s Aotus_nancymaae.KZ196176.1                              5750004 1 +   9889416 C
i Aotus_nancymaae.KZ196176.1                            I 1 C 0
s Aotus_trivirgatus.k141_1740727                             6593 1 -    104377 C
i Aotus_trivirgatus.k141_1740727                        I 1 C 0
s Aotus_vociferans.k141_718647                               6595 1 +     23246 C
i Aotus_vociferans.k141_718647                          I 1 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     4149 1 +      5067 C
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        1502 1 +      9265 C
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 9417 1 -     29036 C
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9539864 1 +  39197703 C
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             61135 1 +     85812 C
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                12148 1 +     89302 C
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             16651 1 -     58268 C
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             64643 1 +    119057 C
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               6614 1 -     25888 C
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 7230 1 -     16375 C
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                                848 1 +      6337 C
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26380664 1 +  51448160 C
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        5836 1 -     13118 C
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   43701 1 -     72089 C
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6560322 1 +   6870073 C
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138140431 1 - 161108492 C
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     572972 1 -    998990 C
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136296164 1 - 158972876 C
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1233244 1 -   1914593 C
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               114501 1 -    171031 C
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 13530 1 +    125063 C
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                15573 1 -    216513 C
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        8116 1 -    134917 C
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3220034 1 -   8989139 C
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           397735 1 -  15254737 C
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2973471 1 +   6889770 C
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11519937 1 +  39901454 C
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   14962 1 +     87036 C
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11266604 1 -  35597290 C
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11089138 1 +  39895921 C
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16456153 1 -  44759192 C
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21325665 1 + 157394656 C
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135706893 1 - 157403528 C
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          309511 1 +    345090 C
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               60196 1 +     67245 C
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   31586 1 +     33760 C
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   159353 1 -    276539 C
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15787087 1 -  24422027 t
i Cavia_aperea.AVPZ01000278.1                           C 0 I 1
s Cavia_porcellus.DS562889.1                             15799023 1 -  24440124 t
i Cavia_porcellus.DS562889.1                            C 0 I 1
s Cavia_tschudii.CavTsc_scaffold_488                       177214 1 +    436027 T
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 I 1
s Cebus_albifrons.Contig22                               18891346 1 -  29618158 C
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 8890 1 -     26817 C
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                13133 1 +     25043 C
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         8539 1 +     21754 C
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4364352 1 +   7569818 C
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         4109 1 -      9338 C
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6555782 1 +   6739814 C
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      27259 1 +     60454 C
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          2465 1 -     21101 C
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         59774 1 -    107033 C
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        2664 1 -     17608 C
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          30160 1 +     30494 C
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          59005 1 -     59240 C
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          2706 1 +     16677 C
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           24865 1 +     35983 C
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11991391 1 +  12117833 C
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46478151 1 +  46592721 C
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      41701 1 -     45581 C
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       2707 1 +     35577 C
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        2482 1 -     25661 C
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        2460 1 -     17744 C
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        22077 1 +     37128 C
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           3229 1 -      6963 C
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           59510 1 -     68416 C
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            8555 1 +     13308 C
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             6158 1 -     18223 C
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             23176 1 +     25473 C
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           42216 1 +     57117 C
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          46895 1 +     54541 C
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chiropotes_israelita.k141_1189915                         71702 1 +    196370 C
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          15882 1 +     40510 C
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15140063 1 -  15256731 a
i Chlorocebus_aethiops.ctg22                            I 466 C 0
s Chlorocebus_pygerythrus.k141_1486215                      34678 1 -     53260 C
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101145238 1 + 101219884 C
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                16932 1 -     21363 C
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           762235 1 +    964067 C
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10887002 1 +  10971483 C
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147665167 1 + 156195979 C
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            17152 1 +     23629 C
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60614065 1 +  78930452 C
i Condylura_cristata.JH655880.1                         C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 279002 1 -    399297 C
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53029688 1 +  72327488 C
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            52491 1 -     70449 C
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  208899 1 -    956709 C
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 31129 1 -     67205 T
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 I 1
s Cuniculus_paca.CunPac_flattened_line_16637                18247 1 +     26546 T
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 I 1
s Dasyprocta_punctata.DasPun_flattened_line_634             59337 1 -    236241 t
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 I 1
s Dasypus_novemcinctus.JH568778.1                          184113 1 -   6883506 G
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16845377 1 +  31942871 C
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80037288 1 -  96802777 C
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18699475 1 -  18957592 C
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 323005 1 +    993696 C
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   3656 1 +    151128 C
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dipodomys_ordii.KN672545.1                              3656787 1 +   4240102 C
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 28430 1 +     28912 C
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                36561 1 -     73477 T
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 I 1
s Eidolon_helvum.KE772537.1                                 12725 1 +     24177 C
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1491936 1 +   1727528 C
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7816909 1 +  15467074 T
i Elephantulus_edwardii.JH947210.1                      C 0 I 14
s Enhydra_lutris.KZ291749.1                              85872665 1 +  99434291 C
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4705046 1 +   6522550 C
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5853453 1 -   7175178 C
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13351958 1 +  41866177 C
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          13447 1 +     92910 C
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11534720 1 +  16010500 g
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48776120 1 -  48907691 C
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          315504 1 +    330699 C
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             61957 1 +     89355 C
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              5552 1 +     13586 C
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               5483 1 -      6809 C
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            11960 1 +     36558 C
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             8281 1 +     60246 C
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                11757 1 +    109717 C
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               16143 1 +     16540 C
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                16418 1 +     27497 C
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           18875 1 +     26808 C
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                33613 1 +     46535 C
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              16337 1 -     29447 C
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129893410 1 - 159252932 C
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129280502 1 - 158578461 C
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 21642 1 +     52776 C
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Galago_moholi.ctg555                                     211404 1 -    847004 C
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           13778 1 -     43889 C
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          10852 1 +     27357 C
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               156771 1 +    324696 T
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    181735 1 -    189561 C
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           13530 1 -     18683 C
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               5839 1 -     14630 C
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119652939 1 - 195582420 C
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         2329 1 +     10286 C
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                              806 1 -     11661 C
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             6135 1 +     56096 C
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        29386 1 -     42470 C
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        46009 1 -     54384 C
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              17697 1 +     53719 A
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                27950 1 -     91191 C
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2551568 1 +  31725842 t
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              147596 1 +    277961 C
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      278864 1 -    477199 C
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              8010 1 -      9143 C
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      5526 1 -   7690867 C
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 17766 1 -     67322 C
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19468 1 -    119109 t
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 I 1
s Hylobates_abbotti.k141_164775                               330 1 -      2073 C
i Hylobates_abbotti.k141_164775                         I 16 C 0
s Hylobates_agilis.k141_1878600                               567 1 -      1230 C
i Hylobates_agilis.k141_1878600                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14625220 1 -  25970782 C
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            2476 1 -      2977 C
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             34379 1 -     60944 C
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     6638 1 +     22540 T
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7126314 1 +  13083262 c
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_5141390                                    863 1 -      3181 C
i Indri_indri.k141_5141390                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               9493 1 +     17520 C
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8566364 1 +  11848649 C
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               24103 1 +     37189 C
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          50733 1 -    147782 C
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                     802 1 +     26176 C
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258407690 1 - 285822530 C
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        24448 1 +     39228 C
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            53832 1 +     63517 C
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        79096 1 +    116806 C
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     32087 1 -     33031 C
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3086457 1 -   3498232 C
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    13740 1 +     22452 C
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            136449 1 +   3060487 C
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19248876 1 +  19376315 C
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           11153 1 +     84689 C
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3778902 1 +   6799190 C
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20595281 1 -  62548349 C
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11088594 1 +  39895028 C
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             20611 1 +     74745 C
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12707068 1 +  12821369 C
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                2710 1 -      3136 C
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           47525 1 +     63263 C
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                 2233 1 -      2568 C
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 2818 1 -      7381 C
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  46035 1 -     79256 C
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196036142 1 + 196197964 C
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11446312 1 +  11645122 C
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   4982 1 -     46448 C
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                2656 1 -     13212 C
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 16335 1 -     55006 C
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43841451 1 +  43892939 C
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               17621 1 -     24607 C
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               4987 1 -     27140 C
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43438036 1 -  43563597 C
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4450856 1 -   4543643 C
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            146537 1 +    252755 A
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             36680 1 +     58827 C
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36874138 1 +  64221397 C
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             1477 1 -     87323 C
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               13407 1 +     15977 G
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1047374 1 -  26018355 C
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_227248                    777 1 -      1377 C
i Mesoplodon_bidens.MesBid_scaffold_227248              C 0 C 0
s Microcebus_murinus.CM007691.1                          16510722 1 +  47401472 C
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               23387 1 -     32043 C
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8210545 1 +  10048721 C
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            35034 1 +     45743 C
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         2585 1 +     29742 C
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        11973 1 -    104932 C
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     6110 1 +      8497 C
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 146878 1 +    154973 C
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                161907 1 +    265003 C
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  1966 1 -     19904 C
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  145392 1 -    168139 C
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          20008 1 -    100666 C
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70767008 1 +  92629107 C
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75490068 1 +  98207768 C
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67556306 1 +  89017189 C
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74331243 1 +  97876770 C
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             12283 1 +     98495 C
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4424846 1 -  28371801 C
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     90420 1 -    117718 T
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 I 1
s Myotis_brandtii.KE161952.1                               968319 1 +   8389877 c
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5019992 1 +   6462685 C
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3465901 1 -   3747815 c
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        11111 1 +     66751 C
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             5498 1 -      8794 C
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nasalis_larvatus.k141_153429                               9092 1 +     48152 C
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4485363 1 -  14209539 C
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3951490 1 -   4490290 C
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Nomascus_annamensis.k141_720788                             474 1 -      1065 C
i Nomascus_annamensis.k141_720788                       C 0 C 0
s Nomascus_concolor.k141_581629                                37 1 -      6578 C
i Nomascus_concolor.k141_581629                         C 0 C 0
s Nomascus_gabriellae.k141_1004198                            345 1 +      1448 C
i Nomascus_gabriellae.k141_1004198                      C 0 C 0
s Nomascus_siki_b.tarseq_80                             25496 1 -  18771707 C
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  3199 1 +      4512 C
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                31394 1 +   3668941 C
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65567597 1 -  95554990 C
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            4323 1 +      6470 C
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65669932 1 +  89412551 C
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4996487 1 -  23139505 C
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3685952 1 +  10294119 t
i Octodon_degus.JH651621.1                              C 0 I 1
s Odobenus_rosmarus.KB229369.1                             680030 1 -   3126709 C
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1080166 1 +   1425656 C
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         37463 1 +     78940 C
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  37565 1 +     62360 C
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7225175 1 -   7562323 C
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              58378 1 -     66828 C
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 I 116
s Oryctolagus_cuniculus.CM000803.1                      141876774 1 + 163896628 C
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      308678 1 -    505867 C
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        1222 1 -     53940 C
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18009202 1 -  38779656 C
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134077741 1 - 275406953 C
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      78956 1 +    140051 C
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127575205 1 - 205426864 C
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120152359 1 - 196562556 C
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  34780 1 +    295523 C
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3638514 1 +  18214204 C
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5028189 1 -   6340057 C
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1066591 1 -   1292953 C
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188156823 1 - 188283584 C
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             5140 1 +      5367 C
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47514208 1 +  47705337 C
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 68184 1 -    104429 C
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    6720 1 +     14967 C
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 2579 1 -      7628 C
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    116271 1 -    135482 C
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           5911 1 -     23713 C
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            25224 1 -     27972 C
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359        305 1 +     49596 G
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4950813 1 -   8017169 T
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    13953 1 -     36578 T
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            121780 1 -    122454 C
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1987485                           2606 1 -      5908 C
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       3230 1 -     17985 C
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            2597 1 +      7694 C
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26741075 1 +  26888534 C
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            98391 1 +    112873 C
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             44339 1 -     61926 C
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        25724 1 +     78826 C
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              9771 1 -     15800 C
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        12970 1 -     16101 C
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          6198 1 +      9673 C
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13475198 1 -  19735023 C
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           14101 1 -     31692 C
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           5866 1 +     21690 C
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       23441 1 +     44506 C
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        23653 1 +     67491 C
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      13893 1 -     98129 C
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     23493 1 +    147771 C
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        23750 1 -     23762 C
i Plecturocebus_cupreus.k141_1223294                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          4212 1 -     55515 C
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         23566 1 +    152463 C
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       1283 1 -    119457 C
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         13289 1 +    134592 C
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          23876 1 -     75465 C
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              187725 1 -    373494 C
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19808373 1 +  19899266 C
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               6336 1 -     15069 C
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              6466 1 +     14865 C
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6849067 1 +  12164890 C
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     19224 1 -     30946 n
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         4145 1 +     11805 C
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           43488 1 +     52369 C
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         35875 1 -     44753 C
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            17799 1 +     27322 C
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       17435 1 -     53241 C
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         39699 1 -     48185 C
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           35690 1 +     77221 G
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            4547 1 -     27784 C
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        247156 1 -    344369 C
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13246462 1 -  17261082 C
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             604413 1 -   3946241 C
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131534794 1 - 161321710 C
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             30457 1 +     56732 C
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6806945 1 +   6970761 C
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             6336 1 +     18040 C
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                16263 1 +     68503 C
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1788288 1 +   2252614 C
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                             746 1 -     17045 C
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206378223 1 - 206558726 C
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44857137 1 -  45163003 C
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                19791 1 +    109198 C
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       8417 1 +     12214 C
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15673303 1 -  43202129 C
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        5216 1 +     34089 C
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              5158 1 -     60842 C
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              5251 1 +     67014 C
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              5229 1 +     60816 C
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 5166 1 -     76454 C
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17341891 1 -  30362882 C
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         21252 1 -     62485 C
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   32745 1 -    114521 C
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        3949 1 +     15331 C
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       9342 1 +     20762 C
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         119345 1 +    130994 C
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           38131 1 +     46263 C
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     31251 1 +     42640 C
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        14291 1 +     30600 C
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  100754 1 -    120886 C
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            19351 1 +    739146 C
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17766484 1 -  27805282 t
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2240230 1 +   2842873 c
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             235274 1 -    276980 C
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            28052 1 +     62062 C
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189272576 1 + 218635234 C
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        15481 1 -  13920577 C
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                 727 1 +     20549 C
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               15164 1 +     45698 C
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      807594 1 +   1148477 C
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  58305 1 +     99546 C
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               26964 1 +     42269 C
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               60280 1 +     65473 C
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194008345 1 - 194193292 C
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             39179 1 -     47444 T
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  5984 1 +      6782 C
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  136544 1 -    259118 C
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        27447 1 +     38948 C
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   21179 1 -     32910 C
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      2565 1 -     12939 C
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       2501 1 -     14244 C
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           43900 1 -     54611 C
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        1703 1 -     11566 C
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     3880 1 -     15592 C
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          2536 1 +     14371 C
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                    817 1 +     12481 C
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                         693 1 -     24393 C
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       5939 1 -     28054 C
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44660739 1 -  44834318 C
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       3047 1 +     13828 C
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   5630 1 +     90398 C
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16085801 1 +  31416278 C
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2793387 1 -   3938065 G
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    5587 1 +     13056 G
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69313891 1 -  96451834 C
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   1793 1 +     10241 C
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6515284 1 +  28682327 C
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  5764 1 -     20643 C
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             25305 1 -     33872 C
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1525139 1 -   2331223 C
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                138774 1 -    281493 C
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       127351 1 -    134049 C
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        214757 1 -    227762 C
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           7390 1 -      8775 C
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                701732 90 +    802869 I
e Dinomys_branickii.DinBra_scaffold_1996                   157477 1 +    228994 I
e Procavia_capensis.ProCapCap_scaffold_149274                2467 1156 -      9567 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Microgale_talazaci.MicTal_scaffold_34660                  35392 3 -     48017 I
e Megaderma_lyra.MegLyr_scaffold_3562                       64783 239 -    234502 I
e Heterohyrax_brucei.HetBruBak_scaffold_25354               61360 1157 +     73687 I
e Echinops_telfairi.JH980316.1                           22999392 3 -  44670279 I
e Crocidura_indochinensis.CroInd_scaffold_848148              199 0 +      1327 C
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1008 325 -      5782 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     15998 19 -     20485 I
e Hylobates_klossii.k141_285563                               343 193 +      1026 I
e Microtus_ochrogaster.CM001673.1                        22820341 4 -  98408828 I
e Rattus_norvegicus.chr11                                13915860 1475 +  90463843 I
e Ondatra_zibethicus.OndZib_scaffold_6821                  125594 4 +    145789 I
e Nannospalax_galili.KL201303.1                            119159 6 +    362372 I
e Graphiurus_murinus.GraMur_scaffold_4493                   77863 0 +    118900 C
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I
e Ellobius_talpinus.LOJH01090055.1                           7151 4 -      7838 I
e Ellobius_lutescens.LOEQ01003611.1                        240029 1 -    369425 I
e Chinchilla_lanigera.JH721867.1                         15962211 0 +  43084221 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               12322  4 +    209709 T-------A-CG
s Acinonyx_jubatus.LLWD01000356.1                         2034456  4 +   3721120 T-------T-GA
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    113029  5 -    189883 A-------AGAA
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10657792  4 +  23371972 T-------A-GA
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7095140  4 -  16596857 T-------A-GA
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   17351  4 -     22067 T-------C-GA
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   1837  4 -     60446 T-------A-GA
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         2557  4 -     29318 T-------A-GA
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         1492  4 +     38766 T-------A-GA
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          2451  4 -     80423 T-------A-GA
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            10754  4 -     18050 T-------A-GA
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_1710068                                469  4 +      1555 T-------A-GA
i Alouatta_caraya.k141_1710068                          C 0 C 0
s Alouatta_discolor.k141_811576                             11427  4 -     21359 T-------A-GA
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                1048  4 +      2129 T-------A-GA
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_2177643                           432  4 -      1868 T-------A-GA
i Alouatta_macconnelli.k141_2177643                     C 0 C 0
s Alouatta_nigerrima.k141_3537692                             481  4 +      1660 T-------A-GA
i Alouatta_nigerrima.k141_3537692                       C 0 C 0
s Alouatta_palliata.k141_2764429                              396  4 -      1480 T-------A-GA
i Alouatta_palliata.k141_2764429                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            4474  4 -      4927 T-------A-GA
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_1531728                             611  4 -      1692 T-------A-GA
i Alouatta_seniculus.k141_1531728                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3520591  4 +   4113121 T-------A-GG
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      390998  4 -    631301 T-------A-GA
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            31174  4 +     33004 T-------A-GC
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 I 2
s Aotus_azarae.k141_3170768                                 63106  4 +     78111 T-------A-GA
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            6048  4 +     22701 T-------A-GG
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5750005  4 +   9889416 T-------A-GA
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             6594  4 -    104377 T-------A-GA
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               6596  4 +     23246 T-------A-GA
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     4150  4 +      5067 T-------A-TG
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 I 2
s Arctocebus_calabarensis.k141_587554                        1503  4 +      9265 T-------G-GA
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 9418  4 -     29036 T-------A-GA
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9539865  4 +  39197703 T-------A-GG
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             61136  4 +     85812 T-------A-GA
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                12149  4 +     89302 T-------A-GA
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             16652  4 -     58268 T-------A-GG
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             64644  4 +    119057 T-------A-GA
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               6615  4 -     25888 T-------A-GA
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 7231  4 -     16375 T-------A-GA
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                                849  4 +      6337 T-------A-GA
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26380665  4 +  51448160 T-------A-GA
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        5837  4 -     13118 T-------A-GA
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   43702  4 -     72089 T-------A-GG
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6560323  4 +   6870073 T-------A-GG
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138140432  4 - 161108492 T-------A-GG
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     572973  4 -    998990 T-------A-GG
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136296165  4 - 158972876 T-------A-GG
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1233245  4 -   1914593 T-------A-GG
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               114502  4 -    171031 T-------A-GA
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 13531  4 +    125063 T-------A-GA
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                15574  4 -    216513 T-------A-GA
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        8117  4 -    134917 T-------A-GA
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3220035  4 -   8989139 T-------A-CA
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           397736  4 -  15254737 T-------A-CA
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2973472  4 +   6889770 T-------A-CA
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11519938  4 +  39901454 T-------A-GA
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   14963  4 +     87036 T-------A-GA
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11266605  4 -  35597290 T-------A-GA
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11089139  4 +  39895921 T-------A-GA
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16456154  4 -  44759192 T-------A-GA
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21325666  4 + 157394656 T-------A-GG
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135706894  4 - 157403528 T-------A-GG
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          309512  4 +    345090 T-------A-GA
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               60197  4 +     67245 T-------C-GA
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   31587  4 +     33760 T-------G-AG
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   159354  4 -    276539 T-------A-GA
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15787089  2 -  24422027 ----------aa
i Cavia_aperea.AVPZ01000278.1                           I 1 C 0
s Cavia_porcellus.DS562889.1                             15799025  2 -  24440124 ----------aa
i Cavia_porcellus.DS562889.1                            I 1 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       177216  2 +    436027 ----------AA
i Cavia_tschudii.CavTsc_scaffold_488                    I 1 C 0
s Cebus_albifrons.Contig22                               18891347  4 -  29618158 T-------A-GA
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 8891  4 -     26817 T-------A-GA
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                13134  4 +     25043 T-------A-GA
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         8540  4 +     21754 T-------A-GA
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4364353  4 +   7569818 T-------A-GA
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         4110  4 -      9338 T-------A-GA
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6555783  4 +   6739814 T-------A-GA
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      27260  4 +     60454 T-------A-GA
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          2466  4 -     21101 T-------A-GA
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         59775  4 -    107033 T-------A-GA
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        2665  4 -     17608 T-------A-GA
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          30161  4 +     30494 T-------A-GA
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          59006  4 -     59240 T-------A-GA
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          2707  4 +     16677 T-------A-GA
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           24866  4 +     35983 T-------A-GA
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11991392  4 +  12117833 T-------A-GG
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46478152  4 +  46592721 T-------A-GA
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      41702  4 -     45581 T-------A-GA
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       2708  4 +     35577 T-------A-GA
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        2483  4 -     25661 T-------A-GA
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        2461  4 -     17744 T-------A-GA
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        22078  4 +     37128 T-------A-GA
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           3230  4 -      6963 T-------A-CA
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           59511  4 -     68416 T-------A-GA
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            8556  4 +     13308 T-------A-GA
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             6159  4 -     18223 T-------A-GA
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             23177  4 +     25473 T-------A-GA
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           42217  4 +     57117 T-------A-GA
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          46896  4 +     54541 T-------A-GA
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chiropotes_israelita.k141_1189915                         71703  4 +    196370 T-------A-GA
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          15883  4 +     40510 T-------A-GA
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15140064 11 -  15256731 TTTTTCAAG-GG
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      34679 11 -     53260 TTTTTCAAG-GG
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101145239  4 + 101219884 T-------A-GA
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                16933  4 -     21363 T-------A-CA
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           762236  4 +    964067 T-------A-CA
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10887003  4 +  10971483 T-------A-GA
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147665168  4 + 156195979 T-------A-GA
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            17153  4 +     23629 T-------A-GA
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60614066  4 +  78930452 T-------G-GA
i Condylura_cristata.JH655880.1                         C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 279003  4 -    399297 T-------A-GA
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53029689  4 +  72327488 T-------A-GG
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            52492  4 -     70449 T-------A-AA
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  208900  4 -    956709 T-------A-TG
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 31131  2 -     67205 ----------CA
i Ctenomys_sociabilis.CteSoc_scaffold_19489             I 1 I 2
s Cuniculus_paca.CunPac_flattened_line_16637                18249  2 +     26546 ----------AG
i Cuniculus_paca.CunPac_flattened_line_16637            I 1 I 2
s Dasyprocta_punctata.DasPun_flattened_line_634             59339  2 -    236241 ----------ag
i Dasyprocta_punctata.DasPun_flattened_line_634         I 1 I 2
s Dasypus_novemcinctus.JH568778.1                          184114  4 -   6883506 T-------A-CA
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16845378  4 +  31942871 T-------A-GA
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80037289  4 -  96802777 T-------A-GA
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18699476  4 -  18957592 T-------A-TA
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 323006  4 +    993696 T-------A-GA
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   3657  4 +    151128 T-------A-GA
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dipodomys_ordii.KN672545.1                              3656788  4 +   4240102 T-------A-AA
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 28431  4 +     28912 T-------A-AA
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                36563  2 -     73477 ----------AG
i Dolichotis_patagonum.DolPat_scaffold_14102            I 1 I 2
s Echinops_telfairi.JH980316.1                           22999395  4 -  44670279 T-------A-GA
i Echinops_telfairi.JH980316.1                          I 3 C 0
s Eidolon_helvum.KE772537.1                                 12726  4 +     24177 T-------G-GA
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1491937  4 +   1727528 T-------A-GG
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Enhydra_lutris.KZ291749.1                              85872666  4 +  99434291 T-------A-GA
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4705047  4 +   6522550 T-------A-GA
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5853454  4 -   7175178 T-------A-GA
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13351959  4 +  41866177 T-------A-GA
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          13448  4 +     92910 T-------A-GA
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11534721  4 +  16010500 t-------a-ca
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48776121  4 -  48907691 T-------A-GA
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          315505  4 +    330699 T-------A-GA
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             61958  4 +     89355 T-------A-GA
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              5553  4 +     13586 T-------T-GA
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               5484  4 -      6809 T-------T-GA
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            11961  4 +     36558 T-------T-GA
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             8282  4 +     60246 T-------T-GA
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                11758  4 +    109717 T-------T-GA
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               16144  4 +     16540 T-------T-GA
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                16419  4 +     27497 T-------T-GA
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           18876  4 +     26808 T-------T-GA
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                33614  4 +     46535 T-------T-GA
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              16338  4 -     29447 T-------T-GA
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129893411  4 - 159252932 T-------T-GA
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129280503  4 - 158578461 T-------T-GA
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 21643  4 +     52776 T-------T-GA
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Galago_moholi.ctg555                                     211405  4 -    847004 T-------G-GA
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           13779  4 -     43889 T-------G-GA
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          10853  4 +     27357 T-------G-GA
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               156772  4 +    324696 A-------A-GA
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    181736  4 -    189561 T-------A-GG
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           13531  4 -     18683 T-------A-GA
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               5840  4 -     14630 T-------A-GA
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119652940  4 - 195582420 T-------A-GA
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         2330  4 +     10286 T-------T-GA
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                              807  4 -     11661 T-------T-GA
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             6136  4 +     56096 T-------T-GA
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        29387  4 -     42470 T-------T-GA
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        46010  4 -     54384 T-------T-GA
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              17698  4 +     53719 T-------A-AA
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                27951  4 -     91191 T-------A-GG
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2551569  1 +  31725842 t-----------
i Heterocephalus_glaber.JH602058.1                      C 0 I 4
s Hippopotamus_amphibius.HipAmp_scaffold_1308              147597  4 +    277961 T-------A-GA
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      278865  4 -    477199 T-------A-GA
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              8011  4 -      9143 T-------A-GA
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      5527  4 -   7690867 T-------A-GA
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 17767  4 -     67322 T-------A-AA
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19470  2 -    119109 ----------ag
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       I 1 I 2
s Hylobates_abbotti.k141_164775                               331  4 -      2073 T-------A-GA
i Hylobates_abbotti.k141_164775                         C 0 C 0
s Hylobates_agilis.k141_1878600                               568  4 -      1230 T-------A-GA
i Hylobates_agilis.k141_1878600                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14625221  4 -  25970782 T-------A-GA
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            2477  4 -      2977 T-------A-GA
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             34380  4 -     60944 T-------A-GA
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     6639  1 +     22540 T-----------
i Hystrix_cristata.HysCri_scaffold_50788                C 0 I 2
s Ictidomys_tridecemlineatus.JH393315.1                   7126315  4 +  13083262 t-------a-ta
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_5141390                                    864  4 -      3181 T-------A-GA
i Indri_indri.k141_5141390                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               9494  4 +     17520 T-------A-GA
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8566365  4 +  11848649 T-------T-GA
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               24104  4 +     37189 T-------A-GA
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          50734  4 -    147782 T-------A-GA
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                     803  4 +     26176 T-------A-GA
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258407691  4 - 285822530 T-------T-GA
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        24449  4 +     39228 T-------A-GA
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            53833  4 +     63517 T-------A-GA
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        79097  4 +    116806 T-------A-GA
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     32088  4 -     33031 T-------A-GA
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3086458  4 -   3498232 T-------A-GA
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    13741  4 +     22452 T-------A-GA
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            136450  4 +   3060487 T-------A-GA
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19248877  4 +  19376315 T-------A-GA
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           11154  4 +     84689 T-------G-GA
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3778903  4 +   6799190 T-------G-GA
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20595282  4 -  62548349 T-------A-GA
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11088595  4 +  39895028 T-------A-GA
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             20612  4 +     74745 T-------A-GA
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12707069  4 +  12821369 T-------A-GA
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                2711  4 -      3136 T-------A-GA
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           47526  4 +     63263 T-------A-GA
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                 2234  4 -      2568 T-------A-GA
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 2819  4 -      7381 T-------A-GA
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  46036  4 -     79256 T-------A-GA
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196036143  4 + 196197964 T-------A-GA
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11446313  4 +  11645122 T-------A-GA
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   4983  4 -     46448 T-------A-GA
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                2657  4 -     13212 T-------A-GA
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 16336  4 -     55006 T-------A-GA
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43841452  4 +  43892939 T-------A-GA
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               17622  4 -     24607 T-------A-GA
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               4988  4 -     27140 T-------A-GA
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43438037  4 -  43563597 T-------A-GA
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4450857  4 -   4543643 T-------A-GA
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            146538  4 +    252755 A-------A-GA
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             36681  4 +     58827 T-------A-GA
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36874139  4 +  64221397 T-------A-TA
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             1478  4 -     87323 T-------A-GA
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               13408  4 +     15977 T-------A-GA
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1047375  4 -  26018355 T-------A-GA
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_227248                    778  4 -      1377 T-------A-GA
i Mesoplodon_bidens.MesBid_scaffold_227248              C 0 C 0
s Microcebus_murinus.CM007691.1                          16510723  4 +  47401472 T-------A-GA
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  35395  4 -     48017 T-------A-GA
i Microgale_talazaci.MicTal_scaffold_34660              I 3 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               23388  4 -     32043 T-------A-GA
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8210546  4 +  10048721 T-------A-GA
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            35035  4 +     45743 T-------A-GA
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         2586  4 +     29742 T-------A-CA
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        11974  4 -    104932 T-------A-GA
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     6111  3 +      8497 --------A-GA
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 146879  4 +    154973 T-------A-GA
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                161908  4 +    265003 T-------A-GA
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  1967  4 -     19904 T-------A-GG
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  145393  4 -    168139 T-------A-AA
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          20009  4 -    100666 T-------A-GA
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70767009  4 +  92629107 T-------A-GA
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75490069  4 +  98207768 t-------a-aa
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67556307  4 +  89017189 T-------A-GA
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74331244  4 +  97876770 T-------A-GA
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             12284  4 +     98495 T-------A-GA
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4424847  4 -  28371801 T-------A-GA
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     90422  2 -    117718 ----------AA
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 1 I 2
s Myotis_brandtii.KE161952.1                               968320  4 +   8389877 t-------a-ga
i Myotis_brandtii.KE161952.1                            C 0 I 218
s Myotis_davidii.KB114863.1                               5019993  4 +   6462685 T-------a-ga
i Myotis_davidii.KB114863.1                             C 0 I 220
s Myotis_lucifugus.GL429887.1                             3465902  4 -   3747815 t-------a-ga
i Myotis_lucifugus.GL429887.1                           C 0 I 220
s Myotis_myotis.MyoMyo_scaffold_6123                        11112  4 +     66751 T-------A-GA
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 I 220
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             5499  4 -      8794 T-------A-CA
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nasalis_larvatus.k141_153429                               9093  4 +     48152 T-------A-GA
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4485364  4 -  14209539 T-------A-GA
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3951491  4 -   4490290 T-------A-GA
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Nomascus_annamensis.k141_720788                             475  4 -      1065 T-------A-GA
i Nomascus_annamensis.k141_720788                       C 0 I 13
s Nomascus_concolor.k141_581629                                38  4 -      6578 T-------A-GA
i Nomascus_concolor.k141_581629                         C 0 C 0
s Nomascus_gabriellae.k141_1004198                            346  4 +      1448 T-------A-GA
i Nomascus_gabriellae.k141_1004198                      C 0 C 0
s Nomascus_siki_b.tarseq_80                             25497  4 -  18771707 T-------A-GA
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  3200  4 +      4512 T-------A-GA
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                31395  4 +   3668941 T-------A-GA
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65567598  4 -  95554990 T-------G-GA
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            4324  4 +      6470 T-------G-GA
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65669933  4 +  89412551 T-------G-GA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4996488  4 -  23139505 C-------A-GA
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3685954  2 +  10294119 ----------aa
i Octodon_degus.JH651621.1                              I 1 I 2
s Odobenus_rosmarus.KB229369.1                             680031  4 -   3126709 T-------A-GA
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1080167  4 +   1425656 T-------A-GG
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         37464  4 +     78940 T-------A-GG
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  37566  4 +     62360 T-------A-GA
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7225176  4 -   7562323 T-------A-GA
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              58495  4 -     66828 T-------G-AA
i Orycteropus_afer.OryAfe_flattened_line_13509          I 116 C 0
s Oryctolagus_cuniculus.CM000803.1                      141876775  4 + 163896628 T-------A-GA
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      308679  4 -    505867 T-------A-GA
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        1223  4 -     53940 T-------G-GA
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18009203  4 -  38779656 T-------G-GA
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134077742  4 - 275406953 T-------A-GG
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      78957  4 +    140051 T-------A-GG
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127575206  4 - 205426864 T-------A-GA
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120152360  4 - 196562556 T-------A-GA
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  34781  4 +    295523 T-------T-GA
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3638515  4 +  18214204 T-------T-GA
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5028190  4 -   6340057 T-------T-GA
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1066592  4 -   1292953 T-------A-GG
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188156824  4 - 188283584 T-------A-GA
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             5141  4 +      5367 T-------A-GA
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47514209  4 +  47705337 T-------A-GA
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 68185  4 -    104429 T-------A-GA
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    6721  4 +     14967 T-------A-GA
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 2580  4 -      7628 T-------A-GA
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    116272  4 -    135482 T-------A-AA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           5912  4 -     23713 T-------G-GA
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            25225  4 -     27972 T-------G-GA
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359        306  4 +     49596 T-------A-GA
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4950814  4 -   8017169 T-------A-GA
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    13954  1 -     36578 T-----------
i Petromus_typicus.PetTyp_scaffold_33007                C 0 I 4
s Phocoena_phocoena.PhoPho_flattened_line_11948            121781  4 -    122454 T-------A-GA
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1987485                           2607  4 -      5908 T-------A-GA
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       3231  4 -     17985 T-------A-GA
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            2598  4 +      7694 T-------A-GA
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26741076  4 +  26888534 T-------A-GA
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            98392  4 +    112873 T-------A-GA
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             44340  4 -     61926 T-------A-GA
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        25725  4 +     78826 T-------A-GA
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              9772  4 -     15800 T-------A-GA
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        12971  4 -     16101 T-------A-GA
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          6199  4 +      9673 T-------A-GA
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13475199  4 -  19735023 T-------A-GA
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           14102  4 -     31692 T-------A-GA
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           5867  4 +     21690 T-------A-GA
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       23442  4 +     44506 T-------A-GA
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        23654  4 +     67491 T-------A-GA
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      13894  4 -     98129 T-------A-GA
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     23494  4 +    147771 T-------A-GA
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1223294                        23751  4 -     23762 T-------A-GA
i Plecturocebus_cupreus.k141_1223294                    C 0 N 0
s Plecturocebus_dubius.k141_3565563                          4213  4 -     55515 T-------A-GA
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         23567  4 +    152463 T-------A-GA
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       1284  4 -    119457 T-------A-GA
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         13290  4 +    134592 T-------A-GA
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          23877  4 -     75465 T-------A-GA
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              187726  4 -    373494 T-------A-GA
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19808374  4 +  19899266 T-------A-GA
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               6337  4 -     15069 T-------A-GA
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              6467  4 +     14865 T-------A-GA
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6849068  4 +  12164890 T-------T-GA
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     19225  4 -     30946 n-------n-nn
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         4146  4 +     11805 T-------A-GA
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           43489  4 +     52369 T-------A-GA
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         35876  4 -     44753 T-------A-GA
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            17800  4 +     27322 T-------A-GA
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       17436  4 -     53241 T-------A-GA
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         39700  4 -     48185 T-------A-GA
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           35691  4 +     77221 T-------A-AA
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            4548  4 -     27784 T-------A-GA
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        247157  4 -    344369 T-------A-GA
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13246463  4 -  17261082 T-------G-GA
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             604414  4 -   3946241 T-------G-GA
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131534795  4 - 161321710 T-------T-GA
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             30458  4 +     56732 T-------A-GA
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6806946  4 +   6970761 T-------A-GA
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             6337  4 +     18040 T-------A-GA
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                16264  4 +     68503 T-------A-GG
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1788289  4 +   2252614 T-------A-GA
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 I 2
s Rhinopithecus_bieti.k119_554384                             747  4 -     17045 T-------A-GA
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206378224  4 - 206558726 T-------A-GA
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44857138  4 -  45163003 T-------A-GA
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                19792  4 +    109198 T-------G-GA
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       8418  4 +     12214 C-------A-GG
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 I 2
s Saimiri_boliviensis.NW_024100938.1                     15673304  4 -  43202129 T-------A-GA
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        5217  4 +     34089 T-------A-GA
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              5159  4 -     60842 T-------A-GA
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              5252  4 +     67014 T-------A-GA
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              5230  4 +     60816 T-------A-GA
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 5167  4 -     76454 T-------A-GA
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17341892  4 -  30362882 T-------A-GG
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         21253  4 -     62485 T-------A-GG
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   32746  4 -    114521 T-------G-GA
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        3950  4 +     15331 T-------A-GA
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       9343  4 +     20762 T-------A-GA
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         119346  4 +    130994 T-------A-GA
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           38132  4 +     46263 T-------A-GA
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     31252  4 +     42640 T-------A-GA
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        14292  4 +     30600 T-------A-GA
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  100755  4 -    120886 T-------A-GA
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            19352  4 +    739146 C-------A-GA
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17766485  4 -  27805282 t-------a-tt
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2240231  4 +   2842873 t-------a-ta
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             235275  4 -    276980 T-------A-GA
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            28053  4 +     62062 T-------A-AA
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189272577  4 + 218635234 T-------A-GA
i Sus_scrofa.CM000824.4                                 C 0 I 2
s Symphalangus_syndactylus.tarseq_24                        15482  4 -  13920577 T-------A-GA
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                 728  4 +     20549 T-------A-GA
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               15165  4 +     45698 T-------A-CA
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      807595  4 +   1148477 T-------A-GA
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  58306  4 +     99546 T-------A-GA
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               26965  4 +     42269 T-------A-GA
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               60281  4 +     65473 T-------A-GA
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194008346  4 - 194193292 T-------A-GA
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             39180  1 -     47444 T-----------
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 I 4
s Tolypeutes_matacus.TolMat_scaffold_269431                  5985  4 +      6782 T-------A-CA
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  136545  4 -    259118 T-------A-GA
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        27448  4 +     38948 T-------A-GA
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   21180  4 -     32910 T-------A-GA
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      2566  4 -     12939 T-------A-GA
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       2502  4 -     14244 T-------A-GA
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           43901  4 -     54611 T-------A-GA
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        1704  4 -     11566 T-------A-GA
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     3881  4 -     15592 T-------A-GA
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          2537  4 +     14371 T-------A-GA
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                    818  4 +     12481 T-------A-GA
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                         694  4 -     24393 T-------A-GA
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       5940  4 -     28054 T-------A-GA
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44660740  4 -  44834318 T-------A-GA
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       3048  4 +     13828 T-------A-GA
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   5631  1 +     90398 T-----------
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16085802  4 +  31416278 T-------A-GA
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2793388  4 -   3938065 T-------G-AG
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    5588  4 +     13056 T-------G-CG
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69313892  4 -  96451834 T-------A-GA
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   1794  4 +     10241 T-------A-GA
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6515285  4 +  28682327 T-------A-GA
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  5765  4 -     20643 T-------A-GA
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             25306  4 -     33872 T-------A-GA
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1525140  4 -   2331223 T-------A-CA
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                138775  4 -    281493 T-------A-GA
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       127352  4 -    134049 T-------A-TA
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        214758  4 -    227762 T-------A-GA
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           7391  4 -      8775 T-------A-GA
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                701732 90 +    802869 I
e Dinomys_branickii.DinBra_scaffold_1996                   157477  1 +    228994 I
e Procavia_capensis.ProCapCap_scaffold_149274                2467 1156 -      9567 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Megaderma_lyra.MegLyr_scaffold_3562                       64783 239 -    234502 I
e Heterohyrax_brucei.HetBruBak_scaffold_25354               61360 1157 +     73687 I
e Elephantulus_edwardii.JH947210.1                        7816910 14 +  15467074 I
e Crocidura_indochinensis.CroInd_scaffold_848148              199  0 +      1327 C
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1008 325 -      5782 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     15998 19 -     20485 I
e Hylobates_klossii.k141_285563                               343 193 +      1026 I
e Microtus_ochrogaster.CM001673.1                        22820341  4 -  98408828 I
e Rattus_norvegicus.chr11                                13915860 1475 +  90463843 I
e Ondatra_zibethicus.OndZib_scaffold_6821                  125594  4 +    145789 I
e Nannospalax_galili.KL201303.1                            119159  6 +    362372 I
e Graphiurus_murinus.GraMur_scaffold_4493                   77863  0 +    118900 C
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I
e Ellobius_talpinus.LOJH01090055.1                           7151  4 -      7838 I
e Ellobius_lutescens.LOEQ01003611.1                        240029  1 -    369425 I
e Chinchilla_lanigera.JH721867.1                         15962211  0 +  43084221 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               12326 13 +    209709 TA--C--------T--TC-------T----------------T----AAGGG
s Acinonyx_jubatus.LLWD01000356.1                         2034460 13 +   3721120 TA--C--------T--TT-------C----------------C----CAGGG
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    113034 11 -    189883 TA--G--------A--T--------T----------------T----a-gtt
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10657796 13 +  23371972 TG--C--------T--TT-------T----------------C----CAGGG
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7095144 13 -  16596857 TA--C--------T--TT-------T----------------C----CAGGG
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   17355 12 -     22067 TA--T--------A--T--------T----------------T----CAGGG
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   1841 13 -     60446 TA--C--------T--TT-------T----------------C----AAGGA
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         2561 13 -     29318 TA--C--------T--TT-------T----------------C----AAGGG
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         1496 13 +     38766 TA--C--------T--TT-------T----------------C----AAGAG
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          2455 13 -     80423 TA--C--------T--TT-------T----------------C----AAGGG
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            10758 13 -     18050 TA--C--------T--TT-------T----------------T----AAGAT
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_1710068                                473 13 +      1555 TA--C--------C--TT-------T----------------T----AAGGT
i Alouatta_caraya.k141_1710068                          C 0 C 0
s Alouatta_discolor.k141_811576                             11431 13 -     21359 TA--C--------T--TT-------T----------------T----AAGAT
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                1052 13 +      2129 TA--C--------C--TT-------T----------------T----AAGGT
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_2177643                           436 13 -      1868 TA--C--------C--TT-------T----------------T----AAGGT
i Alouatta_macconnelli.k141_2177643                     C 0 C 0
s Alouatta_nigerrima.k141_3537692                             485 13 +      1660 TA--C--------C--TT-------T----------------T----AAGGT
i Alouatta_nigerrima.k141_3537692                       C 0 C 0
s Alouatta_palliata.k141_2764429                              400 13 -      1480 TA--C--------T--TT-------T----------------T----AAGAT
i Alouatta_palliata.k141_2764429                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            4478 13 -      4927 TA--C--------C--TT-------T----------------T----AAGGT
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_1531728                             615 13 -      1692 TA--C--------T--TT-------T----------------T----AAGAT
i Alouatta_seniculus.k141_1531728                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3520595 13 +   4113121 TA--C--------T--TT-------T----------------T----CAGAG
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      391002  7 -    631301 TA--C--------T--TT-------T--------------------------
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 I 5
s Antilocapra_americana.AntAmePen_scaffold_42841            31180 10 +     33004 -------------T--AT-------T----------------T----CAGAG
i Antilocapra_americana.AntAmePen_scaffold_42841        I 2 C 0
s Aotus_azarae.k141_3170768                                 63110 13 +     78111 TA--C--------T--TT-------T----------------T----AAGGT
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            6052 13 +     22701 TA--C--------T--TT-------T----------------T----AAGGT
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5750009 13 +   9889416 TA--C--------T--TT-------T----------------T----AAGGT
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             6598 13 -    104377 TA--C--------T--TT-------T----------------T----AAGGT
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               6600 13 +     23246 TA--C--------T--TT-------T----------------T----AAGGT
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     4156 10 +      5067 -------------T--TT-------T----------------T----CTAGG
i Aplodontia_rufa.AprRuf_scaffold_156013                I 2 C 0
s Arctocebus_calabarensis.k141_587554                        1507 13 +      9265 TA--C--------T--CT-------T----------------C----CACAG
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 9422 13 -     29036 TA--C--------T--TT-------T----------------T----TAGGG
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9539869 13 +  39197703 TA--C--------T--TT-------T----------------T----AAGGT
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             61140 13 +     85812 TA--C--------T--TT-------T----------------T----AAGGT
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                12153 13 +     89302 TA--C--------T--TT-------T----------------T----AAGGT
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             16656 13 -     58268 TA--C--------T--TT-------T----------------T----AAGGT
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             64648 13 +    119057 TA--C--------T--TT-------T----------------T----AAGGT
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               6619 13 -     25888 TA--C--------T--TT-------T----------------T----AAGGT
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 7235 13 -     16375 CA--C--------T--TT-------T----------------C----CAAAG
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                                853 13 +      6337 CA--C--------T--TT-------T----------------C----CAAAG
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26380669 13 +  51448160 TA--G--------T--TT-------T----------------T----CAGGG
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        5841 13 -     13118 TA--G--------T--TT-------T----------------T----CAGGG
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   43706 13 -     72089 TA--A--------T--TT-------T----------------T----CAGAG
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6560327 11 +   6870073 TA--C--------T--TT-------T----------------T----CA--G
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138140436 13 - 161108492 TA--C--------T--TT-------T----------------T----CAGAG
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     572977 13 -    998990 TA--C--------T--TT-------T----------------T----CAGAG
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136296169 13 - 158972876 TA--C--------T--TT-------T----------------T----CAGAG
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1233249 13 -   1914593 TA--C--------T--TT-------T----------------T----CAGAG
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               114506 13 -    171031 TA--C--------T--TT-------T----------------T----AAGGT
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 13535 13 +    125063 TA--C--------T--TT-------T----------------T----AAGGT
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                15578 13 -    216513 TA--C--------T--TT-------T----------------T----AAGGT
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        8121 13 -    134917 TA--C--------T--TT-------T----------------T----AAGGT
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3220039 13 -   8989139 TA--C--------C--TT-------T----------------T----CAGGG
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           397740 13 -  15254737 TA--C--------C--TT-------T----------------T----CAGGG
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2973476 13 +   6889770 TA--C--------C--TT-------T----------------T----CAGGG
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11519942 13 +  39901454 CA--C--------T--TT-------T----------------C----CAGAG
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   14967 13 +     87036 CA--C--------T--TT-------T----------------C----CAGAG
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11266609 13 -  35597290 CA--C--------T--TT-------T----------------C----CAGAG
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11089143 13 +  39895921 CA--C--------T--TT-------T----------------C----CAGAG
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16456158 13 -  44759192 CA--C--------T--TT-------T----------------C----CAGAG
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21325670 13 + 157394656 TA--C--------T--TT-------T----------------T----CAGAG
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135706898 13 - 157403528 TA--C--------T--TT-------T----------------T----CAGAG
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          309516 12 +    345090 TA--C--------G--TT-------T----------------C----G-GGG
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               60201 13 +     67245 TA--C--------T--TT-------T----------------T----CAGGG
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   31591 12 +     33760 CA--C--------T--A--------T----------------T----CAAGG
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   159358 13 -    276539 TT--C--------T--TT-------T----------------T----AAGGG
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15787091 11 -  24422027 ----a--------t--tt-------t----------------t----caNNN
i Cavia_aperea.AVPZ01000278.1                           C 0 I 35
s Cavia_porcellus.DS562889.1                             15799027 11 -  24440124 ----a--------t--tt-------t----------------t----cataa
i Cavia_porcellus.DS562889.1                            C 0 I 35
s Cavia_tschudii.CavTsc_scaffold_488                       177218 11 +    436027 ----A--------T--TT-------T----------------T----CATAA
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 I 35
s Cebus_albifrons.Contig22                               18891351 13 -  29618158 TA--C--------T--TT-------T----------------T----AAGAT
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 8895 13 -     26817 TA--C--------T--TT-------T----------------T----AAGAT
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                13138 13 +     25043 TA--C--------T--TT-------T----------------T----AAGAT
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         8544 12 +     21754 TA--C--------G--TT-------T----------------C----G-GGG
i Cephalopachus_bancanus.k141_702587                    C 0 I 2
s Ceratotherium_simum.JH767818.1                          4364357 13 +   7569818 TA--A--------T--TT-------T----------------T----CAGGG
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         4114 13 -      9338 TA--A--------T--TT-------T----------------T----CAGGG
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6555787 13 +   6739814 TA--C--------T--TT-------T----------------C----AAGGG
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      27264 13 +     60454 TA--C--------T--TT-------T----------------C----AAGGG
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          2470 13 -     21101 TA--C--------T--TT-------T----------------C----AAGGG
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         59779 13 -    107033 TA--C--------T--TT-------T----------------C----AAGGG
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        2669 13 -     17608 CA--C--------T--TT-------T----------------C----AAGGG
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          30165 13 +     30494 CA--C--------T--TT-------T----------------C----AAGGG
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          59010 13 -     59240 TA--C--------T--TT-------T----------------C----AAGGG
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          2711 13 +     16677 TA--C--------T--TT-------T----------------C----AAGGG
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           24870 13 +     35983 TA--C--------T--TT-------T----------------C----AAGGG
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11991396 13 +  12117833 TA--C--------T--TT-------T----------------C----AAGGG
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46478156 13 +  46592721 TA--C--------T--TT-------T----------------C----AAGGA
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      41706 13 -     45581 TA--C--------T--TT-------T----------------C----AAGGG
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       2712 13 +     35577 TA--C--------T--TT-------T----------------C----AAGGG
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        2487 13 -     25661 CA--C--------T--TT-------T----------------C----AAGGG
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        2465 13 -     17744 TA--C--------T--TT-------T----------------C----AAGGG
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        22082 13 +     37128 TA--C--------T--TT-------T----------------C----AAGGG
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           3234 30 -      6963 TA--C--------T--AGA------TTGTATATCTAGTACATA----CAGGA
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           59515 13 -     68416 CA--C--------T--TT-------T----------------C----CAAAA
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            8560 13 +     13308 CA--C--------T--TT-------T----------------C----CAAAG
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             6163 13 -     18223 CA--C--------T--TT-------T----------------T----AAGGT
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             23181 13 +     25473 CA--C--------T--TT-------T----------------T----AAGGT
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           42221 13 +     57117 CA--C--------T--TT-------T----------------T----AAGGT
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          46900 13 +     54541 CA--C--------T--TT-------T----------------T----AAGGT
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15962211 10 +  43084221 -------------T--TT-------T----------------T----CAGAG
i Chinchilla_lanigera.JH721867.1                        C 0 I 3
s Chiropotes_israelita.k141_1189915                         71707 13 +    196370 TA--C--------T--TT-------T----------------T----AAGGT
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          15887 13 +     40510 TA--C--------T--TT-------T----------------T----AAGGT
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15140075 13 -  15256731 TA--C--------T--TT-------T----------------C----AAGGG
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      34690 13 -     53260 TA--C--------T--TT-------T----------------C----AAGGG
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101145243 13 + 101219884 TA--C--------T--TT-------T----------------C----AAGGG
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                16937 13 -     21363 TA--C--------T--TT-------C----------------T----CAAGA
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           762240 13 +    964067 TA--C--------T--TT-------C----------------T----CAAGA
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10887007 13 +  10971483 TA--T--------T--TT-------T----------------C----AAGGG
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147665172 13 + 156195979 TA--T--------T--TT-------T----------------C----AAGGG
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            17157 13 +     23629 TA--T--------T--TT-------T----------------C----AAGGG
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60614070 13 +  78930452 TT--C--------T--T-----T--T----------------T----CAGGG
i Condylura_cristata.JH655880.1                         C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 279007 12 -    399297 TA--C--------A--T--------T----------------T----CAGAG
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53029693 12 +  72327488 TA--C--------A--T--------T----------------T----CACGG
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            52496 13 -     70449 TA--C--------T--TT-------C----------------C----CAGGG
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  208904 13 -    956709 CA--T--------A--TT-------T----------------T----CAGGA
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 31135 11 -     67205 ----G--------T--TT-------C----------------T----CAGGG
i Ctenomys_sociabilis.CteSoc_scaffold_19489             I 2 I 3
s Cuniculus_paca.CunPac_flattened_line_16637                18253 11 +     26546 ----A--------T--TT-------T----------------T----CAGGG
i Cuniculus_paca.CunPac_flattened_line_16637            I 2 I 3
s Dasyprocta_punctata.DasPun_flattened_line_634             59343 11 -    236241 ----a--------t--tt-------t----------------t----caagg
i Dasyprocta_punctata.DasPun_flattened_line_634         I 2 I 3
s Dasypus_novemcinctus.JH568778.1                          184118 13 -   6883506 TA--C--------T--TT-------T----------------T----CAGGA
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16845382 13 +  31942871 CA--C--------A--TT-------T----------------C----CAAGG
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80037293 13 -  96802777 TA--G--------T--TT-------T----------------T----CAGGG
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18699480 13 -  18957592 TA--C--------T--TT-------T----------------T----CAGGG
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 323010 13 +    993696 TA--A--------T--TT-------T----------------T----CAGGG
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   3661 13 +    151128 TA--A--------T--TT-------T----------------T----CAGGG
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   157478 11 +    228994 ----A--------T--TT-------T----------------T----CATGG
i Dinomys_branickii.DinBra_scaffold_1996                I 1 I 3
s Dipodomys_ordii.KN672545.1                              3656792 12 +   4240102 CA--C--------T--T--------T----------------C----CAGGG
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 28435 12 +     28912 CA--C--------T--T--------T----------------C----CAGGG
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                36567 11 -     73477 ----A--------T--TT-------T----------------T----CAAGG
i Dolichotis_patagonum.DolPat_scaffold_14102            I 2 I 3
s Echinops_telfairi.JH980316.1                           22999399 13 -  44670279 TG--A--------C--TT-------T----------------TCA-T---AT
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 12730 13 +     24177 TA--C--------T--TT-------T----------------T----CAGAG
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1491941 13 +   1727528 TA--C--------T--TT-------T----------------T----CAAAG
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7816924  5 +  15467074 -----------------------------------------------CAGAA
i Elephantulus_edwardii.JH947210.1                      I 14 C 0
s Enhydra_lutris.KZ291749.1                              85872670 13 +  99434291 TA--C--------T--TT-------T----------------C----CAGAG
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4705051 13 +   6522550 TA--T--------T--TT-------A----------------T----CAGGG
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5853458 13 -   7175178 TA--A--------T--TT-------T----------------T----CAGGG
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13351963 13 +  41866177 AA--A--------T--TT-------T----------------T----CAGGG
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          13452 13 +     92910 AA--A--------T--TT-------T----------------T----CAGGG
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11534725 22 +  16010500 ta--gatcTGTGAA--TT----T--T----------------T----CAGAG
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48776125 13 -  48907691 TA--C--------T--TT-------T----------------C----AAGGG
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          315509 13 +    330699 TA--G--------T--TT-------T----------------T----CAGGG
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             61962 13 +     89355 TA--G--------T--TT-------T----------------T----CAGGG
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              5557 13 +     13586 CA--C--------T--TT-------T----------------C----CAAGG
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               5488 13 -      6809 CA--C--------T--TT-------T----------------C----CAAGG
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            11965 13 +     36558 CA--C--------T--TT-------T----------------C----CAAGG
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             8286 13 +     60246 CA--C--------T--TT-------T----------------C----CAAGG
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                11762 13 +    109717 CA--C--------T--TT-------T----------------C----CAAGG
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               16148 13 +     16540 CA--C--------T--TT-------T----------------C----CAAGG
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                16423 13 +     27497 CA--C--------T--TT-------T----------------C----CAAGG
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           18880 13 +     26808 CA--C--------T--TT-------T----------------C----CAAGG
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                33618 13 +     46535 CA--C--------T--TT-------T----------------C----CAAGG
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              16342 13 -     29447 CA--C--------T--TT-------T----------------C----CAAGG
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129893415 13 - 159252932 TA--C--------T--TT-------C----------------C----CAGGG
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129280507 13 - 158578461 TA--C--------T--TT-------C----------------C----CAGGG
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 21647 13 +     52776 TA--C--------T--TT-------C----------------C----CAGGG
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Galago_moholi.ctg555                                     211409 13 -    847004 TA--C--------T--TT-------C----------------C----CACAG
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           13783 13 -     43889 TA--C--------T--TT-------C----------------C----CACAG
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          10857 13 +     27357 TA--C--------T--TT-------T----------------C----CACAG
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               156776 15 +    324696 TA--C--------TACTT-------T----------------T----CAGAG
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    181740 13 -    189561 TA--C--------T--TT-------T----------------T----CAGAG
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           13535 13 -     18683 GA--C--------T--TT-------T----------------C----CAGGG
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               5844 13 -     14630 TA--C--------T--TT-------T----------------T----AAGGG
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119652944 13 - 195582420 TA--C--------T--TT-------T----------------T----AAGGG
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         2334 13 +     10286 CA--C--------T--TT-------T----------------C----CAAGG
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                              811 13 -     11661 CA--C--------T--TT-------T----------------C----CAAGG
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             6140 13 +     56096 CA--C--------T--TT-------T----------------C----CAAGG
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        29391 13 -     42470 CA--C--------T--TT-------T----------------C----CAAGG
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        46014 13 -     54384 CA--C--------T--TT-------T----------------C----CAAGG
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              17702 13 +     53719 TA--C--------T--TT-------T----------------C----CAGGG
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                27955 13 -     91191 TA--C--------T--TT-------T----------------T----CAGAG
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2551574 11 +  31725842 ----a--------t--tt-------t----------------t----caaaG
i Heterocephalus_glaber.JH602058.1                      I 4 I 3
s Hippopotamus_amphibius.HipAmp_scaffold_1308              147601 13 +    277961 TA--C--------T--TT-------T----------------T----CAGGG
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      278869 14 -    477199 TA--C--------T--TT----T--T----------------T----CAGGG
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              8015 14 -      9143 TA--C--------T--TT----T--T----------------T----CAGGG
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      5531 13 -   7690867 TA--C--------T--TT-------T----------------T----AAGGG
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 17771 13 -     67322 TA--C--------T--TT-------T----------------C----CAGAG
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19474 11 -    119109 ----a--------t--tt-------t----------------t----caggg
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       I 2 I 3
s Hylobates_abbotti.k141_164775                               335 13 -      2073 TA--C--------T--TT-------T----------------T----AAGGG
i Hylobates_abbotti.k141_164775                         C 0 C 0
s Hylobates_agilis.k141_1878600                               572 13 -      1230 TA--C--------T--TT-------T----------------T----AAGGG
i Hylobates_agilis.k141_1878600                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14625225 13 -  25970782 TA--C--------T--TT-------T----------------T----AAGGG
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            2481 13 -      2977 TA--C--------T--TT-------T----------------T----AAGGG
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             34384 13 -     60944 TA--C--------T--TT-------T----------------T----AAGGG
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     6642 13 +     22540 CT--A--------T--TT-------T----------------T----CAGGG
i Hystrix_cristata.HysCri_scaffold_50788                I 2 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7126319 15 +  13083262 aatat--------t--tt-------t----------------c----ataaa
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_5141390                                    868 13 -      3181 CA--C--------T--TT-------T----------------C----CAAAG
i Indri_indri.k141_5141390                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               9498 13 +     17520 TA--G--------T--TG-------T----------------T----CAGGG
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8566369 12 +  11848649 TA--T--------G--T--------T----------------T----TAGGG
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               24108 13 +     37189 CA--G--------T--TT-------T----------------T----CAGGG
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          50738 13 -    147782 TA--C--------G--TT-------T----------------T----AAGGT
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                     807 13 +     26176 TA--C--------T--TT-------A----------------T----TAGGG
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258407695 13 - 285822530 CA--C--------T--TT-------T----------------C----CAAAG
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        24453 13 +     39228 CA--C--------T--TT-------T----------------C----CAAAG
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            53837 13 +     63517 CA--C--------T--TT-------T----------------C----CAAAG
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        79101 13 +    116806 CA--C--------T--TT-------T----------------C----CAAAG
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     32092 13 -     33031 CA--C--------T--TT-------T----------------C----CAAAG
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3086462 13 -   3498232 TA--C--------T--TC-------T----------------C----CAGGG
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    13745 13 +     22452 GA--C--------T--TT-------T----------------T----CAGGC
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            136454 14 +   3060487 TA--G--------T--TT----T--T----------------T----CAGGG
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19248881 13 +  19376315 TA--C--------T--TT-------T----------------C----AAGGG
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           11158 13 +     84689 TA--C--------T--TT-------T----------------C----CACAG
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3778907 13 +   6799190 TA--C--------T--TT-------T----------------C----CACAG
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20595286 13 -  62548349 TA--C--------T--TT-------T----------------T----CAAGG
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11088599 13 +  39895028 CA--C--------T--TT-------T----------------C----CAGAG
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             20616 13 +     74745 TA--C--------T--TT-------T----------------C----AAGGG
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12707073 13 +  12821369 TA--C--------T--TT-------T----------------C----AAGGG
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                2715 13 -      3136 TA--C--------T--TT-------T----------------C----AAGGG
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           47530 13 +     63263 TA--C--------T--TT-------T----------------C----AAGGG
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                 2238 13 -      2568 TA--C--------T--TT-------T----------------C----AAGGG
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 2823 13 -      7381 TA--C--------T--TT-------T----------------C----AAGGG
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  46040 13 -     79256 TA--C--------T--TT-------T----------------C----AAGGG
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196036147 13 + 196197964 TA--C--------T--TT-------T----------------C----AAGGG
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11446317 13 +  11645122 TA--C--------T--TT-------T----------------C----AAGGG
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   4987 13 -     46448 TA--C--------T--TT-------T----------------C----AAGGG
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                2661 13 -     13212 TA--C--------T--TT-------T----------------C----AAGGG
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 16340 13 -     55006 TA--C--------T--TT-------T----------------C----AAGGG
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43841456 13 +  43892939 TA--C--------T--TT-------T----------------C----AAGGG
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               17626 13 -     24607 TA--C--------T--TT-------T----------------C----AAGGG
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               4992 13 -     27140 TA--C--------T--TT-------T----------------C----AAGGG
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43438041 13 -  43563597 TA--C--------T--TT-------T----------------C----AAGGG
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4450861 13 -   4543643 TA--C--------T--TT-------T----------------C----AAGGG
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            146542 13 +    252755 TA--C--------T--TT-------T----------------T----CAGGG
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             36685 13 +     58827 TA--T--------T--TT-------T----------------T----CAGGG
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36874143 15 +  64221397 CACTT--------T--TT-------T----------------C----ATGAA
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             1482 13 -     87323 TA--C--------T--TT-------T----------------C----CAGGG
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               13412 12 +     15977 TA--T--------A--T--------T----------------T----ATGAG
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1047379 12 -  26018355 CA--C--------A--T--------T----------------T----CAGAG
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_227248                    782 13 -      1377 TA--G--------T--TT-------T----------------T----CAGGG
i Mesoplodon_bidens.MesBid_scaffold_227248              C 0 C 0
s Microcebus_murinus.CM007691.1                          16510727 13 +  47401472 CA--C--------T--TT-------T----------------C----CAAAG
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  35399 13 -     48017 TT--A--------T--CT-------T----------------C-TGT---AT
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               23392 13 -     32043 TA--C--------T--TT-------T----------------T----CAGTG
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8210550 13 +  10048721 TA--C--------T--TT-------T----------------T----CAGGG
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            35039 13 +     45743 TA--C--------T--TT-------T----------------T----CAGGG
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         2590 13 +     29742 TA--C--------T--TT-------T----------------C----AAGGG
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        11978 13 -    104932 TA--C--------T--TC-------T----------------C----CAGGG
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     6114 13 +      8497 CA--C--------T--TT-------T----------------C----CAAAG
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 146883 13 +    154973 TA--G--------T--TT-------T----------------T----CAGGG
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                161912 13 +    265003 TA--C--------T--TT-------T----------------T----CAGGG
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  1971 13 -     19904 TA--C--------T--TT-------T----------------C----CAGAG
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  145397 13 -    168139 TA--C--------T--TT-------T----------------C----CAGGG
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          20013 13 -    100666 TA--C--------T--TT-------A----------------T----CAGGG
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70767013 12 +  92629107 TA--T--------A--T--------T----------------T----CTAAG
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75490073 12 +  98207768 ta--t--------a--t--------t----------------t----ctaaa
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67556311 12 +  89017189 TA--T--------A--T--------T----------------T----CTGAG
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74331248 12 +  97876770 TA--T--------A--T--------T----------------T----CTAAG
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             12288 13 +     98495 TA--C--------T--TT-------T----------------T----CAGGG
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4424851 13 -  28371801 TA--T--------T--TT-------T----------------C----CAGAG
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     90426 11 -    117718 ----A--------T--TT-------T----------------T----CTGGG
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 2 I 3
s Myotis_brandtii.KE161952.1                               968542 13 +   8389877 ta--c--------t--TT-------A----------------T----CAGGG
i Myotis_brandtii.KE161952.1                            I 218 C 0
s Myotis_davidii.KB114863.1                               5020217 13 +   6462685 TA--C--------T--TT-------A----------------T----CAGGG
i Myotis_davidii.KB114863.1                             I 220 C 0
s Myotis_lucifugus.GL429887.1                             3466126 13 -   3747815 ta--c--------t--TT-------A----------------T----CAGGG
i Myotis_lucifugus.GL429887.1                           I 220 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        11336 13 +     66751 TA--C--------T--TT-------A----------------T----CAGGG
i Myotis_myotis.MyoMyo_scaffold_6123                    I 220 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             5503 13 -      8794 TA--C--------A--TT-------T----------------T----TAGAA
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nasalis_larvatus.k141_153429                               9097 13 +     48152 TA--T--------T--TT-------T----------------C----AAGGG
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4485368 13 -  14209539 TA--C--------T--TC-------T----------------C----CAGGG
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3951495 13 -   4490290 TA--G--------T--TT-------T----------------T----CAGGG
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Nomascus_annamensis.k141_220265                             992 13 +      1763 TA--C--------T--TT-------T----------------T----AAGGG
i Nomascus_annamensis.k141_220265                       I 30 I 474
s Nomascus_concolor.k141_581629                                42 13 -      6578 TA--C--------T--TT-------T----------------T----AAGGG
i Nomascus_concolor.k141_581629                         C 0 C 0
s Nomascus_gabriellae.k141_1004198                            350 13 +      1448 TA--C--------T--TT-------T----------------T----AAGGG
i Nomascus_gabriellae.k141_1004198                      C 0 C 0
s Nomascus_siki_b.tarseq_80                             25501 13 -  18771707 TA--C--------T--TT-------T----------------T----AAGGG
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  3204 13 +      4512 TA--C--------T--TT-------T----------------T----AAGGG
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                31399 13 +   3668941 CA--C--------T--TT-------T----------------C----CAGAG
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65567602 13 -  95554990 TA--C--------T--TT-------T----------------C----CACAG
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            4328 13 +      6470 TA--C--------T--TT-------T----------------C----CACAG
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65669937 13 +  89412551 TA--C--------T--TT-------T----------------C----CACAG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4996492 13 -  23139505 TA--C--------A--TG-------T----------------T----CAGGG
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3685958 11 +  10294119 ----a--------t--tt-------t----------------t----caggg
i Octodon_degus.JH651621.1                              I 2 I 3
s Odobenus_rosmarus.KB229369.1                             680035 13 -   3126709 TA--C--------T--TT-------T----------------C----CAGGG
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1080171 13 +   1425656 TA--C--------T--TT-------T----------------T----CAGAG
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         37468 13 +     78940 TA--C--------T--TT-------T----------------T----CAGCG
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  37570 12 +     62360 CA--C--------A--T--------T----------------T----CAGAG
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7225180 13 -   7562323 TA--G--------T--TT-------T----------------T----CAGGG
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              58499 24 -     66828 TT--C--------T--TTACAATAAA----------------TCAGTAAGGG
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141876779 13 + 163896628 GA--C--------T--TT-------T----------------T----CAGGC
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      308683 13 -    505867 CA--C--------T--TT-------T----------------C----CAGAG
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        1227 13 -     53940 TA--C--------T--TT-------C----------------C----CACAG
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18009207 13 -  38779656 TT--C--------T--TT-------C----------------C----CACAG
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134077746 13 - 275406953 TA--C--------T--TT-------T----------------T----CAGAG
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      78961 13 +    140051 TA--C--------T--TT-------T----------------T----CAGAG
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127575210 13 - 205426864 TA--C--------T--TT-------T----------------T----AAGGG
i Pan_paniscus.CM003386.1                               C 0 I 21
s Pan_troglodytes.CM009241.2                            120152364 13 - 196562556 TA--C--------T--TT-------T----------------T----AAGGG
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  34785 13 +    295523 TA--C--------T--TT-------C----------------C----CAGGG
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3638519 13 +  18214204 TA--C--------T--TT-------C----------------C----CAGGG
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5028194 13 -   6340057 TA--C--------T--TT-------C----------------C----CAGGG
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1066596 13 -   1292953 TA--C--------T--TT-------T----------------T----CAGAG
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188156828 13 - 188283584 TA--C--------T--TT-------T----------------C----AAGGG
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             5145 13 +      5367 TA--C--------T--TT-------T----------------C----AAGGG
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47514213 13 +  47705337 TA--C--------T--TT-------T----------------C----AAGGG
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 68189 13 -    104429 TA--C--------T--TT-------T----------------C----AAGGG
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    6725 13 +     14967 TA--C--------T--TT-------T----------------C----AAGGG
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 2584 13 -      7628 TA--C--------T--TT-------T----------------C----AAGGG
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    116276 13 -    135482 TA--C--------T--TT-------T----------------C----CAGGG
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           5916 13 -     23713 TA--C--------T--TT-------T----------------C----CATGG
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            25229 13 -     27972 TA--C--------T--TT-------T----------------C----CATGG
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359        310 12 +     49596 CA--C--------T--T--------T----------------C----CAGGG
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4950818 12 -   8017169 CA--C--------A--T--------T----------------T----CAGAG
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    13959 11 -     36578 ----A--------T--TT-------T----------------T----CTCAG
i Petromus_typicus.PetTyp_scaffold_33007                I 4 I 3
s Phocoena_phocoena.PhoPho_flattened_line_11948            121785 13 -    122454 TA--G--------T--TT-------T----------------T----CAGGG
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1987485                           2611 13 -      5908 TA--T--------T--TT-------T----------------C----AAGGG
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       3235 13 -     17985 TA--T--------T--TT-------T----------------C----AAGGG
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            2602 13 +      7694 TA--T--------T--TT-------T----------------C----AAGGG
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26741080 13 +  26888534 TA--T--------T--TT-------T----------------C----AAGGG
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            98396 13 +    112873 TA--T--------T--TT-------A----------------T----CAGGG
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             44344 13 -     61926 TA--C--------T--TT-------T----------------T----AAGGT
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        25729 13 +     78826 TA--C--------T--TT-------T----------------T----AAGGT
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              9776 13 -     15800 TA--C--------T--TT-------T----------------T----AAGGT
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        12975 13 -     16101 TA--C--------T--TT-------T----------------T----AAGGT
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          6203 13 +      9673 TA--C--------T--TT-------T----------------T----AAGGT
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13475203 13 -  19735023 TA--C--------T--TT-------T----------------T----AAGGT
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           14106 13 -     31692 TA--C--------T--TT-------T----------------T----AAGGT
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           5871 13 +     21690 TA--G--------T--CT-------T----------------T----CAGGG
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       23446 13 +     44506 TA--C--------T--TT-------T----------------T----AAGGT
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        23658 13 +     67491 TA--C--------T--TT-------T----------------T----AAGGT
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      13898 13 -     98129 TA--C--------T--TT-------T----------------T----AAGGT
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     23498 13 +    147771 TA--C--------T--TT-------T----------------T----AAGGT
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                          134 13 -     43940 TA--C--------T--TT-------T----------------T----AAGGT
i Plecturocebus_cupreus.k141_1145860                    N 0 C 0
s Plecturocebus_dubius.k141_3565563                          4217 13 -     55515 TA--C--------T--TT-------T----------------T----AAGGT
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         23571 13 +    152463 TA--C--------T--TT-------T----------------T----AAGGT
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       1288 13 -    119457 TA--C--------T--TT-------T----------------T----AAGGT
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         13294 13 +    134592 TA--C--------T--TT-------T----------------T----AAGGT
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          23881 13 -     75465 TA--C--------T--TT-------T----------------T----AAGGT
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              187730 13 -    373494 TA--A--------T--TT-------T----------------T----AAGGG
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19808378 13 +  19899266 TA--A--------T--TT-------T----------------T----AAGGG
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               6341 13 -     15069 TA--T--------T--TT-------T----------------C----AAGGG
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              6471 13 +     14865 TA--T--------T--TT-------T----------------C----AAGGG
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6849072 13 +  12164890 CA--C--------T--TT-------T----------------C----CAAGG
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     19229 13 -     30946 nn--n--------n--nn-------n----------------n----nnnnn
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         4150 13 +     11805 CA--C--------T--TT-------T----------------C----CAAAG
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           43493 13 +     52369 CA--C--------T--TT-------T----------------C----CAAAG
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         35880 13 -     44753 CA--C--------T--TT-------T----------------C----CAAAG
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            17804 13 +     27322 CA--C--------T--TT-------T----------------C----CAAAG
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       17440 13 -     53241 CA--C--------T--TT-------T----------------C----CAAAG
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         39704 13 -     48185 CA--C--------T--TT-------T----------------C----CAAAG
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           35695 12 +     77221 TA--T--------A--T--------T----------------T----ATGAG
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            4552 13 -     27784 CA--C--------T--TT-------T----------------T----CAGGG
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        247161 13 -    344369 TA--C--------T--TT-------T----------------C----CAGAG
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13246467 13 -  17261082 TA--C--------T--TT-------T----------------T----CAGAG
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             604418 13 -   3946241 TA--C--------T--TT-------T----------------T----CAGAG
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131534799 13 - 161321710 TA--C--------T--TT-------C----------------C----CAGGG
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             30462 13 +     56732 TA--T--------T--TT-------T----------------T----AAGGG
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6806950 13 +   6970761 TA--T--------T--TT-------T----------------C----AAGGG
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             6341 13 +     18040 TA--T--------T--TT-------T----------------C----AAGGG
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                16268 13 +     68503 TA--C--------T--TT-------T----------------T----CAGAG
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1788295 10 +   2252614 ----------------TT----T--T----------------T----CAGGA
i Rhinolophus_sinicus.LVEH01000179.1                    I 2 C 0
s Rhinopithecus_bieti.k119_554384                             751 13 -     17045 TA--T--------T--TT-------T----------------C----AAGGG
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206378228 13 - 206558726 TA--T--------T--TT-------T----------------C----AAGGG
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44857142 13 -  45163003 TA--T--------T--TT-------T----------------C----AAGGG
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                19796 13 +    109198 AA--C--------T--TT-------T----------------T----CAGAG
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       8424 10 +     12214 -------------T--TT-------T----------------T----CAGAA
i Saiga_tatarica.SaiTat_scaffold_82192                  I 2 C 0
s Saimiri_boliviensis.NW_024100938.1                     15673308 13 -  43202129 TA--C--------T--TT-------T----------------T----AAGGT
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        5221 13 +     34089 TA--C--------T--TT-------T----------------T----AAGGT
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              5163 13 -     60842 TA--C--------T--TT-------T----------------T----AAGGT
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              5256 13 +     67014 TA--C--------T--TT-------T----------------T----AAGGT
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              5234 13 +     60816 TA--C--------T--TT-------T----------------T----AAGGT
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 5171 13 -     76454 TA--C--------T--TT-------T----------------T----AAGGT
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17341896 13 -  30362882 TA--C--------T--TT-------T----------------T----AAGAT
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         21257 13 -     62485 TA--C--------T--TT-------T----------------T----AAGAT
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   32750 14 -    114521 TT--A---T----T--T-----T--T----------------T----CAGGA
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        3954 13 +     15331 TA--T--------T--TT-------T----------------C----AAGGG
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       9347 13 +     20762 TA--T--------T--TT-------T----------------C----AAGGG
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         119350 13 +    130994 TA--T--------T--TT-------T----------------C----AAGGG
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           38136 13 +     46263 TA--T--------T--TT-------T----------------C----AAGGG
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     31256 13 +     42640 TA--T--------T--TT-------T----------------C----AAGGG
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        14296 13 +     30600 TA--T--------T--TT-------T----------------C----AAGGG
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  100759 12 -    120886 CA--C--------A--T--------T----------------T----CAGAG
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            19356 14 +    739146 TA--C--------T--TT----T--T----------------T----CAAGG
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17766489 16 -  27805282 ta--t--------t--tt------tt--------------act----catgG
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2240235 15 +   2842873 aatat--------t--tt-------t----------------c----ataaa
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             235279 13 -    276980 TA--C--------T--TT-------T----------------C----CAGAG
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            28057 13 +     62062 TA--C--------T--TT-------T----------------C----CAGGG
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189272583  8 + 218635234 -----------------C-------T----------------T----AAGGG
i Sus_scrofa.CM000824.4                                 I 2 C 0
s Symphalangus_syndactylus.tarseq_24                        15486 13 -  13920577 TA--C--------T--TT-------T----------------T----AAGGG
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                 732 13 +     20549 TA--C--------T--TT-------T----------------T----CAGGG
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               15169 13 +     45698 TA--C--------A--TT-------T----------------T----TAGAA
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      807599 13 +   1148477 TA--A--------T--TT-------T----------------T----CAGGG
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  58310 13 +     99546 TA--A--------T--TT-------T----------------T----CAGGG
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               26969 12 +     42269 TA--C--------G--TT-------T----------------C----G-GGG
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               60285 12 +     65473 TA--C--------G--TT-------T----------------C----G-GGG
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194008350 13 - 194193292 TA--C--------T--TT-------T----------------C----AAGGG
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             39185 11 -     47444 ----A--------T--TT-------T----------------T----CACTG
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         I 4 I 3
s Tolypeutes_matacus.TolMat_scaffold_269431                  5989 14 +      6782 TA--C--------T--TT----T--T----------------T----TGGGA
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  136549 13 -    259118 TA--C--------T--TT-------T----------------T----TAGGG
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        27452 13 +     38948 TA--T--------T--TT-------T----------------C----AAGGG
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   21184 13 -     32910 TA--T--------T--TT-------T----------------C----AAGGG
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      2570 13 -     12939 TA--T--------T--TT-------T----------------C----AAGGG
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       2506 13 -     14244 TA--T--------T--TT-------T----------------C----AAGGG
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           43905 13 -     54611 TA--T--------T--TT-------T----------------C----AAGGG
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        1708 13 -     11566 TA--T--------T--TT-------T----------------C----AAGGG
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     3885 13 -     15592 TA--T--------T--TT-------T----------------C----AAGGG
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          2541 13 +     14371 TA--T--------T--TT-------T----------------C----AAGGG
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                    822 13 +     12481 TA--T--------T--TT-------T----------------C----AAGGG
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                         698 13 -     24393 TA--T--------T--TT-------T----------------C----AAGGG
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       5944 13 -     28054 TA--T--------T--TT-------T----------------C----AAGGG
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44660744 13 -  44834318 TA--T--------T--TT-------T----------------C----AAGGG
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       3052 13 +     13828 TA--T--------T--TT-------T----------------C----AAGGG
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   5632 12 +     90398 -A--C--------T--TT-------T----------------T----CAAGG
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16085806 14 +  31416278 GA--C--------T--TT----T--T----------------T----CAGGG
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2793392 12 -   3938065 TA--C--------T--TT-------T----------------T-----AGGG
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    5592 12 +     13056 TA--C--------T--TT-------A----------------T-----AGGG
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69313896 13 -  96451834 TA--G--------T--TT-------T----------------T----CAGGG
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   1798 13 +     10241 TT--T--------T--T-----T--T----------------T----CAGGA
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6515289 13 +  28682327 TA--C--------T--TT-------T----------------C----CAGGG
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  5769 13 -     20643 CA--C--------T--TT-------T----------------C----CAAGG
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             25310 13 -     33872 CA--C--------T--TT-------T----------------C----CAAGG
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1525144 13 -   2331223 TA--A--------C--TT-------T----------------T----CAGGG
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                138779 13 -    281493 CA--C--------T--TT-------T----------------C----CAGAG
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       127356 15 -    134049 CACAC--------T--TT-------T----------------T----CAGAG
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        214762 13 -    227762 TA--C--------T--TT-------T----------------C----CAGGG
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           7395 13 -      8775 TA--G--------T--TT-------T----------------T----CAGGG
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                701732 90 +    802869 I
e Procavia_capensis.ProCapCap_scaffold_149274                2467 1156 -      9567 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Megaderma_lyra.MegLyr_scaffold_3562                       64783 239 -    234502 I
e Heterohyrax_brucei.HetBruBak_scaffold_25354               61360 1157 +     73687 I
e Crocidura_indochinensis.CroInd_scaffold_848148              199  0 +      1327 C
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1008 325 -      5782 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     15998 19 -     20485 I
e Hylobates_klossii.k141_285563                               343 193 +      1026 I
e Microtus_ochrogaster.CM001673.1                        22820341  4 -  98408828 I
e Rattus_norvegicus.chr11                                13915860 1475 +  90463843 I
e Ondatra_zibethicus.OndZib_scaffold_6821                  125594  4 +    145789 I
e Nannospalax_galili.KL201303.1                            119159  6 +    362372 I
e Graphiurus_murinus.GraMur_scaffold_4493                   77863  0 +    118900 C
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I
e Ellobius_talpinus.LOJH01090055.1                           7151  4 -      7838 I
e Ellobius_lutescens.LOEQ01003611.1                        240029  1 -    369425 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               12339 21 +    209709 T-------A---T-AAATAAAG--T-------C----A-----GAGCCT-G
s Acinonyx_jubatus.LLWD01000356.1                         2034473 21 +   3721120 T-------G---T-AACCAAAG--T-------C----A-----GAGACT-A
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    113045 27 -    189883 c-------a---c-aaacatac--tccata-ta----t-----atgcat-g
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10657809 21 +  23371972 T-------G---T-AACCGAAG--T-------C----A-----GATCTT-G
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7095157 21 -  16596857 T-------G---T-ATCCAAAG--T-------C----A-----GAGCTT-G
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   17367 28 -     22067 CAAAACC-A---A-AGTCAAAG--T-------C----A-----GAATATTA
i Allactaga_bullata.AllBul_scaffold_70162               C 0 I 14
s Allenopithecus_nigroviridis.k141_2469532                   1854 21 -     60446 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         2574 21 -     29318 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         1509 21 +     38766 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          2468 21 -     80423 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            10771 21 -     18050 T-------T---T-AACCAAAG--C-------C----A-----GAGCTT-G
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_1710068                                486 21 +      1555 T-------T---T-AACCAAAG--C-------C----A-----GAGCTT-G
i Alouatta_caraya.k141_1710068                          C 0 C 0
s Alouatta_discolor.k141_811576                             11444 21 -     21359 T-------T---T-AACCAAAG--C-------C----A-----GAGCTT-G
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                1065 21 +      2129 T-------T---T-AACCAAAG--C-------C----A-----GAGCTT-G
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_2177643                           449 21 -      1868 T-------T---T-AACCAAAG--C-------C----A-----GAGCTT-G
i Alouatta_macconnelli.k141_2177643                     C 0 C 0
s Alouatta_nigerrima.k141_3537692                             498 21 +      1660 T-------T---T-AACCAAAG--C-------C----A-----GAGCTT-G
i Alouatta_nigerrima.k141_3537692                       C 0 C 0
s Alouatta_palliata.k141_2764429                              413 21 -      1480 T-------T---T-AACCAAAG--C-------C----A-----GAGCTT-G
i Alouatta_palliata.k141_2764429                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            4491 21 -      4927 T-------T---T-AACCAAAG--C-------C----A-----GAGCTT-G
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_1531728                             628 21 -      1692 T-------T---T-AACCAAAG--C-------C----A-----GAGCTT-G
i Alouatta_seniculus.k141_1531728                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3520608 21 +   4113121 T-------A---T-AACCAAAG--T-------C----A-----GAGCCT-A
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      391014 21 -    631301 T-------A---T-AACCAAAG--T-------C----A-----GAGACT-G
i Anoura_caudifer.AnoCau_scaffold_422                   I 5 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            31190 21 +     33004 T-------A---T-AACCAAAA--T-------C----A-----GAGCCT-A
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 63123 21 +     78111 T-------A---T-AACCAAAG--T-------C----A-----GAGCTT-G
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            6065 21 +     22701 T-------A---T-AACCAAAG--T-------C----A-----GAGCTT-G
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5750022 21 +   9889416 T-------A---T-AACCAAAG--T-------C----A-----GAGCTT-G
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             6611 21 -    104377 T-------A---T-AACCAAAG--T-------C----A-----GAGCTT-G
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               6613 21 +     23246 T-------A---T-AACCAAAG--T-------C----A-----GAGCTT-G
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     4166 14 +      5067 C-------A---T-TA---GAG--T-------C----A-----GAG-----
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 I 2
s Arctocebus_calabarensis.k141_587554                        1520 21 +      9265 T-------A---T-AATCAAAG--T-------C----A-----AAGTCT-G
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 9435 21 -     29036 T-------A---T-AACCAAAG--T-------C----A-----GAGACT-T
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9539882 21 +  39197703 T-------A---T-AACCAAAG--C-------C----A-----GAGCTT-G
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             61153 21 +     85812 T-------A---T-AACCAAAG--C-------C----A-----GAGCTT-G
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                12166 21 +     89302 T-------A---T-AACCAAAG--C-------C----A-----GAGCTT-G
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             16669 21 -     58268 T-------A---T-AACCAAAG--C-------C----A-----GAGCTT-G
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             64661 21 +    119057 T-------A---T-AACCAAAG--C-------C----A-----GAGCTT-G
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               6632 21 -     25888 T-------A---T-AACCAAAG--C-------C----A-----GAGCTT-G
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 7248 21 -     16375 T-------A---T-AACCAAAG--T-------C----A-----AAGCCT-G
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                                866 21 +      6337 T-------A---T-AACCAAAG--T-------C----A-----AAGCCT-G
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26380682 21 +  51448160 T-------A---T-AACCAAAG--T-------C----A-----GAGCCT-A
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        5854 21 -     13118 T-------A---T-AACCAAAG--T-------C----A-----GAGCCT-A
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   43719 20 -     72089 T-------A---T-AACCA-AG--T-------C----A-----GAGCCT-A
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6560338 21 +   6870073 T-------A---T-AACCAAAG--T-------C----A-----GAGCCT-A
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138140449 21 - 161108492 T-------A---T-AACCAAAG--T-------C----A-----GAGCCT-A
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     572990 21 -    998990 T-------A---T-AACCAAAG--T-------C----A-----GAGCCT-A
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136296182 21 - 158972876 T-------A---T-AACCAAAG--T-------C----A-----GAGCCT-A
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1233262 21 -   1914593 T-------A---T-AACCAAAG--T-------C----A-----GAGCCT-A
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               114519 21 -    171031 T-------A---T-AACCAAAG--C-------T----C-----CAGCTT-G
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 13548 21 +    125063 T-------A---T-AACCAAAG--C-------T----C-----CAGCTT-G
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                15591 21 -    216513 T-------A---T-AACCAAAG--C-------T----C-----CAGCTT-G
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        8134 21 -    134917 T-------A---T-AACCAAAG--C-------T----C-----CAGCTT-G
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3220052 20 -   8989139 T-------A---T-AAGTAAAG--T-------C----A-----GAGCCT--
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           397753 20 -  15254737 T-------A---T-AAGTAAAG--T-------C----A-----GAGCCT--
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2973489 20 +   6889770 T-------A---T-AAGTAAAG--T-------C----A-----GAGCCT--
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11519955 20 +  39901454 T-------G---T-AACCAAAA--T-------C----A-----GACC-T-G
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   14980 20 +     87036 T-------G---T-AACCAAAA--T-------C----A-----GACC-T-G
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11266622 20 -  35597290 T-------G---T-AACCAAAA--T-------C----A-----GACC-T-G
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11089156 20 +  39895921 T-------G---T-AACCAAAA--T-------C----A-----GACC-T-G
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16456171 20 -  44759192 T-------G---T-AACCAAAA--T-------C----A-----GACC-T-G
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21325683 21 + 157394656 T-------A---T-GACCAAAG--T-------C----A-----GAGCCT-A
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135706911 21 - 157403528 T-------A---T-GACCAAAG--T-------C----A-----GAGCCT-A
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          309528 21 +    345090 T-------A---C-AATCAAAG--T-------C----A-----GAATCT-G
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               60214 21 +     67245 T-------A---T-AACCAAAG--T-------C----A-----GGGACT-G
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   31603 21 +     33760 C-------A---T-AACCAAAG--T-------C----A-----GAGCCC-A
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   159371 21 -    276539 T-------A---T-AACCAAAG--T-------C----A-----GCGCCT-A
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15787137 18 -  24422027 --------------NNNNNAAG--T-------C----A-----AAGCCA-G
i Cavia_aperea.AVPZ01000278.1                           I 35 C 0
s Cavia_porcellus.DS562889.1                             15799073 18 -  24440124 --------------aataaaag--t-------c----a-----AAGTCA-G
i Cavia_porcellus.DS562889.1                            I 35 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       177264 18 +    436027 --------------AATAAAAG--T-------C----A-----AAGTCA-G
i Cavia_tschudii.CavTsc_scaffold_488                    I 35 C 0
s Cebus_albifrons.Contig22                               18891364 21 -  29618158 T-------A---T-AACCAAAG--C-------C----A-----GAGCTT-G
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 8908 21 -     26817 T-------A---T-AACCAAAG--C-------C----A-----GAGCTT-G
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                13151 21 +     25043 T-------A---T-AACCAAAG--C-------C----A-----GAGCTT-G
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         8558 15 +     21754 -----------------CAAAG--T-------C----A-----GAATCT-G
i Cephalopachus_bancanus.k141_702587                    I 2 C 0
s Ceratotherium_simum.JH767818.1                          4364370 21 +   7569818 T-------A---T-AACTAAAG--T-------C----A-----GAGCTT-G
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         4127 21 -      9338 T-------A---T-AACTAAAG--T-------C----A-----GAGCTT-G
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6555800 21 +   6739814 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      27277 21 +     60454 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          2483 21 -     21101 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         59792 21 -    107033 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        2682 21 -     17608 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          30178 21 +     30494 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          59023 21 -     59240 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          2724 21 +     16677 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           24883 21 +     35983 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11991409 21 +  12117833 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46478169 21 +  46592721 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      41719 21 -     45581 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       2725 21 +     35577 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        2500 21 -     25661 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        2478 21 -     17744 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        22095 21 +     37128 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           3264 21 -      6963 T-------A---T-ATTCAATA--C-------T----A-----TAGCCT-G
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           59528 21 -     68416 T-------A---T-AATGAAAG--T-------C----A-----AAGCCT-G
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            8573 21 +     13308 T-------A---T-AATGAAAG--T-------C----A-----AAGCCT-G
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             6176 21 -     18223 T-------A---T-AATCAAAA--C-------C----C-----CAGCTT-G
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             23194 21 +     25473 T-------A---T-AATCAAAA--C-------C----C-----CAGCTT-G
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           42234 21 +     57117 T-------A---T-AATCAAAA--C-------C----C-----CAGCTT-G
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          46913 21 +     54541 T-------A---T-AATCAAAA--C-------C----C-----CAGCTT-G
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15962224 18 +  43084221 --------------AATAAAAG--T-------C----A-----GAACCA-G
i Chinchilla_lanigera.JH721867.1                        I 3 C 0
s Chiropotes_israelita.k141_1189915                         71720 21 +    196370 T-------A---T-AACCAAAG--C-------T----C-----CAGCTT-G
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          15900 21 +     40510 T-------A---T-AACCAAAG--C-------T----C-----CAGCTT-G
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15140088 21 -  15256731 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      34703 21 -     53260 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101145256 21 + 101219884 T-------A---T-AAATAAAG--G-------C----A-----GAGCCT-G
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                16950 21 -     21363 A-------A---C-ATTCAATG--T-------C----A-----TAGCCT-G
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           762253 21 +    964067 A-------A---C-ATTCAATG--T-------C----A-----TAGCCT-G
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10887020 21 +  10971483 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147665185 21 + 156195979 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            17170 21 +     23629 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60614083 12 +  78930452 T-------A---T-AACCAAAG--T--------------------------
i Condylura_cristata.JH655880.1                         C 0 I 8
s Cricetomys_gambianus.CriGam_scaffold_949                 279019 26 -    399297 C-------A---T-AAACACAG--T-AGAC-CC----T-----GTGTAT-G
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53029705 26 +  72327488 C-------A---T-AAACAAAG--T-AGAT-CC----T-----ATGTTC-G
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            52509 21 -     70449 T-------G---T-AACCAAAG--T-------C----A-----GAGTCT-A
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  208917 16 -    956709 T-------A---T-G-ATAAAG--T-------C----A-----GAG-----
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 I 1
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 31149 18 -     67205 --------------ACCAAGAC--T-------C----A-----GAGCCA-G
i Ctenomys_sociabilis.CteSoc_scaffold_19489             I 3 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                18267 16 +     26546 --------------AATA--AG--T-------C----T-----GAGCCA-G
i Cuniculus_paca.CunPac_flattened_line_16637            I 3 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             59357 18 -    236241 --------------aataaAAG--T-------C----A-----GAGCCA-G
i Dasyprocta_punctata.DasPun_flattened_line_634         I 3 C 0
s Dasypus_novemcinctus.JH568778.1                          184131 21 -   6883506 T-------A---T-TTTCAATG--T-------T----A-----TTGCCT-G
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16845395 21 +  31942871 T-------A---T-AACCAAAG--T-------C----A-----AAGCCT-G
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80037306 21 -  96802777 T-------A---T-AACCAAAG--T-------C----A-----GAGCCt-a
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18699493 21 -  18957592 T-------A---T-AACCAAAC--T-------C----G-----GAGAct-g
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 323023 21 +    993696 T-------A---T-AACTAAAG--T-------C----A-----GAGCTT-G
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   3674 21 +    151128 T-------A---T-AACTAAAG--T-------C----A-----GAGCTT-A
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   157492 18 +    228994 --------------AATAAAAG--T-------C----A-----GAGCCA-G
i Dinomys_branickii.DinBra_scaffold_1996                I 3 C 0
s Dipodomys_ordii.KN672545.1                              3656804 25 +   4240102 T-------C---T-AGTTA-AG--T-------C----ACAGAGGAGTTA-G
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 28447 25 +     28912 T-------C---T-AGTTA-AG--T-------C----ACAGGGGAGTTA-G
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                36581 18 -     73477 --------------AACAAAAG--T-------C----A-----GAGCCA-G
i Dolichotis_patagonum.DolPat_scaffold_14102            I 3 C 0
s Echinops_telfairi.JH980316.1                           22999412 20 -  44670279 T-------A---T-ACTAAATG--T-------C----A-----TCAC-T-G
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 12743 19 +     24177 T-------A---T-AAACGA----T-------C----A-----GAgcct-t
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1491954 21 +   1727528 T-------A---T-AACCAAAG--T-------C----A-----GAGCCt-a
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7816929 21 +  15467074 T-------A---A-GTTCACTG--T-------T----G-----TAGAAA-G
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85872683 21 +  99434291 T-------C---T-ATCCAAAG--T-------C----A-----GAGTTT-G
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4705064 18 +   6522550 C-------A---T-AACCAAAG--T-------C----A-----A---TT-G
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5853471 21 -   7175178 T-------A---T-AACCAAAG--T-------C----A-----GAGCCT-G
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13351976 21 +  41866177 T-------A---T-AACCAAAG--T-------C----A-----GAGCCT-G
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          13465 21 +     92910 T-------A---T-AACCAAAG--T-------C----A-----GAGCCT-G
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11534747 28 +  16010500 T----CCAA---T-CACCAAGG--T-------CAGTTA-----GAACAT-A
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48776138 21 -  48907691 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          315522 21 +    330699 T-------A---T-AACCAAAG--T-------C----A-----GAGCAT-A
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             61975 21 +     89355 T-------A---T-AACCAAAG--T-------C----A-----GAGCCT-A
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              5570 21 +     13586 C-------A---T-AACCAAAG--T-------C----A-----AAGCCT-G
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               5501 21 -      6809 C-------A---T-AACCAAAG--T-------C----A-----AAGCCT-G
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            11978 21 +     36558 C-------A---T-AACCAAAG--T-------C----A-----AAGCCT-G
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             8299 21 +     60246 C-------A---T-AACCAAAG--T-------C----A-----AAGCCT-G
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                11775 21 +    109717 C-------A---T-AACCAAAG--T-------C----A-----AAGCCT-G
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               16161 21 +     16540 C-------A---T-AACCAAAG--T-------C----A-----AAGCCT-G
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                16436 21 +     27497 C-------A---T-AACCAAAG--T-------C----A-----AAGCCT-G
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           18893 21 +     26808 C-------A---G-AACCAAAG--T-------C----A-----AAGCCT-G
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                33631 21 +     46535 C-------A---T-AACCAAAG--T-------C----A-----AAGCCT-G
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              16355 21 -     29447 C-------A---T-AACCAAAG--T-------C----A-----AAGCCT-G
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129893428 21 - 159252932 T-------G---T-AACCAAAG--T-------C----A-----GAGTCT-A
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129280520 21 - 158578461 T-------G---T-AACCAAAG--T-------C----A-----GAGTCT-A
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 21660 21 +     52776 T-------G---T-AACCAAAG--T-------C----A-----GAGTCT-A
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Galago_moholi.ctg555                                     211422 21 -    847004 T-------A---T-AATCAAAG--T-------C----A-----AAGTCT-G
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           13796 21 -     43889 T-------A---T-AATCAAAG--T-------C----A-----AAGTCT-G
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          10870  8 +     27357 T-------A---T-AATCA--------------------------------
i Galagoides_demidoff.k141_1769638                      C 0 I 7
s Galeopterus_variegatus.GalVar_scaffold_354               156791 21 +    324696 T-------A---T-AACAAAAG--T-------C----A-----GAGCCC-A
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    181753 21 -    189561 T-------A---T-AACCAAAG--T-------C----A-----GAGCTT-A
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           13548 21 -     18683 T-------a---t-agccaatg--t-------a----a-----gagttt-g
i Glis_glis.GliGli_scaffold_79770                       C 0 I 697
s Gorilla_beringei.k141_111300                               5857 21 -     14630 T-------A---T-AAACAAAG--T-------C----A-----GAGCCT-G
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119652957 21 - 195582420 T-------A---T-AAACAAAG--T-------C----A-----GAGCCT-G
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         2347 21 +     10286 C-------A---T-AACCAAAG--T-------C----A-----AAGCCT-G
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                              824 21 -     11661 C-------A---T-AACCAAAG--T-------C----A-----AAGCCT-G
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             6153 21 +     56096 C-------A---T-AACCAAAG--T-------C----A-----AAGCCT-G
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        29404 21 -     42470 C-------A---T-AACCAAAG--T-------C----A-----AAGCCT-G
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        46027 21 -     54384 C-------A---T-AACCAAAG--T-------C----A-----AAGCCT-G
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              17715 21 +     53719 T-------G---T-AACCAAAG--T-------G----A-----GAGTCT-A
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                27968 21 -     91191 T-------A---T-AACCAAAG--T-------C----A-----GAGCCT-A
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2551588 18 +  31725842 --------------AATAAAAG--T-------C----A-----GAGCCA-G
i Heterocephalus_glaber.JH602058.1                      I 3 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              147614 21 +    277961 T-------A---T-AACCAAAG--T-------C----A-----GAGCCT-A
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      278883 21 -    477199 T-------G---T-AACCAA--AGT-------C----A-----GAGcct-g
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              8029 21 -      9143 T-------A---T-AACCAA--AGT-------C----A-----GAGCCT-G
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      5544 21 -   7690867 T-------A---T-AAACAAAG--T-------C----A-----GAGCCT-G
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 17784 21 -     67322 T-------G---T-AACTAAAG--T-------C----A-----GAGTCT-A
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19488 18 -    119109 --------------aataaAAG--T-------C----A-----GAGCCA-G
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       I 3 C 0
s Hylobates_abbotti.k141_164775                               348 21 -      2073 T-------A---T-AAACAAAG--T-------C----A-----GAGCCT-G
i Hylobates_abbotti.k141_164775                         C 0 C 0
s Hylobates_agilis.k141_1878600                               585 21 -      1230 T-------A---T-AAACAAAG--T-------C----A-----GAGCCT-G
i Hylobates_agilis.k141_1878600                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14625238 21 -  25970782 T-------A---T-AAACAAAG--T-------C----A-----GAGCCT-G
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            2494 21 -      2977 T-------A---T-AAACAAAG--T-------C----A-----GAGGCT-G
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             34397 21 -     60944 T-------A---T-AAACAAAG--T-------C----A-----GAGCCT-G
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     6655 21 +     22540 T-------A---A-AACAAAAG--T-------T----A-----GAGCCG-G
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7126334 24 +  13083262 t--ctat-ATGCT-TATCATAG--T-------C----A-----GAG-----
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 I 2
s Indri_indri.k141_5141390                                    881 21 -      3181 T-------A---T-AACCAAAG--T-------C----A-----AAGCCT-G
i Indri_indri.k141_5141390                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               9511 21 +     17520 T-------A---T-AACCAAAG--T-------C----A-----GAGCCT-A
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8566381 27 +  11848649 CAAGACC-A---A-AGCCAAAG--T-------C----A-----GAGTAT-A
i Jaculus_jaculus.JH725517.1                            C 0 I 14
s Kogia_breviceps.KogBre_flattened_line_35920               24121 21 +     37189 T-------A---T-AACCAAAG--T-------C----A-----GAGCCT-A
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          50751 21 -    147782 T-------A---T-AACCAAAG--C-------C----A-----GAGCTT-G
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                     820 19 +     26176 T-------T---T-AACCA--G--T-------C----A-----GAGCCT-G
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258407708 21 - 285822530 G-------A---T-AACCAAAG--T-------C----A-----AAGCCT-G
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        24466 21 +     39228 T-------A---T-AACCAAAG--T-------C----A-----AAGCCT-G
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            53850 21 +     63517 T-------A---T-AACCAAAG--T-------C----A-----AAGCCT-G
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        79114 21 +    116806 T-------A---T-AACCAAAG--T-------C----A-----AAGCCT-G
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     32105 21 -     33031 T-------A---T-AACCAAAG--T-------C----A-----AAGCCT-G
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3086475 21 -   3498232 T-------G---T-AACCCAAA--T-------T----A-----GATctt-g
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    13758 21 +     22452 T-------A---T-AATTAAAG--G-------A----A-----GAACCT-G
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            136468 21 +   3060487 T-------A---C-AAGCAAAG--T-------C----A-----GAGCCt-a
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19248894 21 +  19376315 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           11171 21 +     84689 T-------A---T-AATCAAAA--T-------C----A-----AAGTCT-G
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3778920 21 +   6799190 T-------A---T-AATCAAAA--T-------C----A-----AAGTCT-G
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20595299 21 -  62548349 T-------A---T-ACGTAATG--C-------C----A-----TAGCAT-G
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11088612 20 +  39895028 T-------G---T-AACCAAAA--T-------C----A-----GACC-T-G
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             20629 21 +     74745 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12707086 21 +  12821369 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                2728 21 -      3136 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           47543 21 +     63263 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                 2251 21 -      2568 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 2836 21 -      7381 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  46053 21 -     79256 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196036160 21 + 196197964 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11446330 21 +  11645122 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   5000 21 -     46448 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                2674 21 -     13212 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 16353 21 -     55006 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43841469 21 +  43892939 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               17639 21 -     24607 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               5005 21 -     27140 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43438054 21 -  43563597 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4450874 21 -   4543643 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            146555 21 +    252755 T-------T---T-AGTGAAAG--T-------C----A-----GAGCAT-G
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             36698 21 +     58827 T-------T---T-AGTGAAAG--T-------C----A-----GAGCAT-G
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36874158 17 +  64221397 TCTA--T-ATACT-TAACATA------------------------------
i Marmota_marmota.CZRN01000005.1                        C 0 I 5
s Mellivora_capensis.MelCap_flattened_line_15433             1495 21 -     87323 T-------C---T-ATCCAAAG--T-------C----A-----GAGCTT-G
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               13424 26 +     15977 C-------A---T-AAACAAAG--T-AGAC-TC----T-----GTGTAT-G
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1047391 26 -  26018355 C-------A---T-AAACAAAG--T-AGAT-CC----T-----ATGTGC-G
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_227248                    795 21 -      1377 T-------A---T-AACTAAAG--T-------C----A-----GAGCCT-A
i Mesoplodon_bidens.MesBid_scaffold_227248              C 0 C 0
s Microcebus_murinus.CM007691.1                          16510740 21 +  47401472 T-------A---T-AATGAAAG--T-------C----A-----AAGCCT-T
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  35412 20 -     48017 T-------A---T-TCTAAATG--T-------C----A-----TCAC-T-G
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               23405 21 -     32043 T-------A---T-AACCAAAG--T-------C----G-----GAGGCT-G
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8210563 21 +  10048721 T-------T---T-AACCAAAG--T-------C----A-----GAGCCT-G
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            35052 21 +     45743 T-------T---T-AACCAAAG--T-------C----A-----GAGCCT-G
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         2603 21 +     29742 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        11991 21 -    104932 T-------G---T-AACCCAAA--T-------T----A-----GATCTT-G
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     6127 21 +      8497 T-------A---T-AATAAAAG--T-------C----A-----AAGCCT-G
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 146896 21 +    154973 T-------A---T-AACCAAAG--T-------C----A-----GAGCCT-A
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                161925 21 +    265003 T-------A---T-AACTAAAG--T-------C----A-----GAGCCT-G
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  1984 21 -     19904 T-------A---T-AACCAAAG--T-------C----A-----GAGCCT-A
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  145410 21 -    168139 T-------G---T-AACCAAAG--T-------C----A-----GAGTCT-A
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          20026 21 -    100666 T-------T---T-AATAAAAG--T-------T----A-----GAGTCT-G
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70767025 26 +  92629107 C-------A---T-AAACAAAG--T-AGAC-CC----T-----GTGTAC-G
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75490085 26 +  98207768 c-------a---t-AAACAAAG--T-AGAC-CC----T-----GCATAT-G
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67556323 26 +  89017189 T-------A---T-AAACAAAG--T-AGAC-cc----t-----gtgtat-g
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74331260 26 +  97876770 C-------A---T-AAACAAAG--T-AGAC-CC----T-----GCATAT-G
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             12301 21 +     98495 G-------A---T-AGACAAAG--T-------C----A-----GAGGCT-G
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 I 226
s Mustela_putorius.JH417978.1                             4424864 21 -  28371801 T-------C---T-ATCCAAAG--T-------C----A-----GAGCTT-G
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     90440 18 -    117718 --------------ATCAAGAG--T-------C----A-----GAGCCA-G
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 3 C 0
s Myotis_brandtii.KE161952.1                               968555 21 +   8389877 T-------T---T-AACCAAAG--T-------C----A-----GAGCCT-G
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5020230 21 +   6462685 T-------T---T-AACCAAAG--T-------C----A-----GAGCCT-G
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3466139 21 -   3747815 T-------T---T-AACCAAAG--T-------C----A-----GAGCCT-G
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        11349 21 +     66751 T-------T---T-AACCAAAG--T-------C----A-----GAGCCT-G
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             5516 21 -      8794 T-------A---T-ATTCAGTG--T-------C----A-----TAGCCT-G
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nasalis_larvatus.k141_153429                               9110 21 +     48152 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4485381 21 -  14209539 T-------G---T-AACCCAAA--T-------T----A-----GATctt-g
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3951508 21 -   4490290 T-------A---T-AACCAAAG--T-------C----A-----GAGCCt-a
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Nomascus_annamensis.k141_720788                             492 21 -      1065 T-------A---T-AAACAAAG--T-------C----A-----GAGCCT-G
i Nomascus_annamensis.k141_720788                       I 13 C 0
s Nomascus_concolor.k141_581629                                55 21 -      6578 T-------A---T-AAACAAAG--T-------C----A-----GAGCCT-G
i Nomascus_concolor.k141_581629                         C 0 C 0
s Nomascus_gabriellae.k141_1004198                            363 21 +      1448 T-------A---T-AAACAAAG--T-------C----A-----GAGCCT-G
i Nomascus_gabriellae.k141_1004198                      C 0 C 0
s Nomascus_siki_b.tarseq_80                             25514 21 -  18771707 T-------A---T-AAACAAAG--T-------C----A-----GAGCCT-G
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  3217 21 +      4512 T-------A---T-AAACAAAG--T-------C----A-----GAGCCT-G
i Nomascus_siki_a.k141_595747                             C 0 I 1
s Nyctereutes_procyonoides.CAJHUB010000786.1                31412 21 +   3668941 T-------G---T-AACCAAAA--T-------C----A-----GACCTT-G
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65567615 21 -  95554990 T-------A---T-AATCAAAA--T-------C----A-----AAGTCT-G
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            4341 21 +      6470 T-------A---T-AATCAAAA--T-------C----A-----AAGTCT-G
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65669950 21 +  89412551 T-------A---T-AATCAAAA--T-------C----A-----AAGTCT-G
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4996505 21 -  23139505 T-------A---T-AATGAAAG--A-------T----G-----GAACCT-C
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3685972 18 +  10294119 --------------ATAAAAAC--T-------C----A-----GAGTCA-T
i Octodon_degus.JH651621.1                              I 3 C 0
s Odobenus_rosmarus.KB229369.1                             680048 21 -   3126709 T-------G---T-AACCCGAA--T-------T----A-----GATCTT-G
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1080184 21 +   1425656 T-------A---T-AACCAAAG--T-------C----A-----GAGCCT-A
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         37481 21 +     78940 T-------A---T-AACCAAAG--T-------C----A-----GAGCCT-A
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  37582 26 +     62360 C-------A---T-AAACAAAG--T-AGAC-CC----T-----TTGCGT-A
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7225193 21 -   7562323 T-------A---T-AACCAAAG--T-------C----A-----GAGCCT-A
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              58523 21 -     66828 T-------A---T-ATTCAATG--C-------C----A-----CAGCTT-G
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141876792 21 + 163896628 T-------A---T-AAACAAAG--G-------A----A-----GAACCT-G
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      308696 21 -    505867 T-------G---T-AACCAAAA--C-------C----A-----GACCTT-G
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        1240 21 -     53940 T-------A---T-AATCAAAG--T-------C----A-----AAGTCT-G
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18009220 21 -  38779656 T-------A---T-AATCAAAG--T-------C----A-----AAGTCT-G
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134077759 21 - 275406953 T-------A---T-AACCAAAG--T-------C----A-----GAGCCT-A
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      78974 21 +    140051 T-------A---T-AACCAAAG--T-------C----A-----GAGCCT-A
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.AJFE02002857.1                                 907 22 -      1091 T-------A---TAAAACAAAG--T-------C----A-----GAGCCT-G
i Pan_paniscus.AJFE02002857.1                           I 220 I 25
s Pan_troglodytes.CM009241.2                            120152377 21 - 196562556 T-------A---T-AAACAAAG--T-------C----A-----GAGCCT-G
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  34798 21 +    295523 T-------G---T-AACCAAAG--T-------C----A-----GAGTCT-A
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3638532 21 +  18214204 T-------G---T-AACCAAAG--T-------C----A-----GAGTCT-A
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5028207 21 -   6340057 T-------G---T-AACCAAAG--T-------C----A-----GAGTCT-A
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1066609 21 -   1292953 T-------A---T-AACCAAAG--T-------C----A-----GAGCCT-A
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188156841 21 - 188283584 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             5158 21 +      5367 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47514226 21 +  47705337 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 68202 21 -    104429 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    6738 21 +     14967 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 2597 21 -      7628 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    116289 21 -    135482 T-------G---T-AACCAAAG--T-------C----A-----GAGTCT-A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           5929 21 -     23713 T-------A---T-AATCAAAG--T-------C----A-----AAGTCT-G
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            25242 21 -     27972 T-------A---T-AATCAAAG--T-------C----A-----AAGTCT-G
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359        322 16 +     49596 T-------C---T-AGT-A-AG--T-------C----A-----AAGC----
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4950830 25 -   8017169 C-------A---T-AAA-AAAG--G-AGAC-CC----T-----TTGTAT-G
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    13973 18 -     36578 --------------ACTAAAAG--C-------C----A-----AAGCTA-G
i Petromus_typicus.PetTyp_scaffold_33007                I 3 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            121798 21 -    122454 T-------A---T-AACCAAAG--T-------C----A-----GAGCCT-A
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1987485                           2624 21 -      5908 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       3248 21 -     17985 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            2615 21 +      7694 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26741093 21 +  26888534 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            98409 18 +    112873 T-------T---T-AACCAATG--T-------C----A-----A---TT-G
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             44357 21 -     61926 T-------A---T-AACCAAAG--C-------T----C-----CAGCTT-G
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        25742 21 +     78826 T-------A---T-AACCAAAG--C-------T----C-----CAGCTT-G
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              9789 21 -     15800 T-------A---T-AACCAAAG--C-------T----C-----CAGCTT-G
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        12988 21 -     16101 T-------A---T-AACCAAAG--C-------T----C-----CAGCTT-G
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          6216 21 +      9673 T-------A---T-AACCAAAG--C-------T----C-----CAGCTT-G
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13475216 21 -  19735023 T-------A---T-AACCAAAG--C-------T----C-----CAGCTT-G
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           14119 21 -     31692 T-------A---T-AACCAAAG--C-------T----C-----CAGCTT-G
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           5884 21 +     21690 T-------A---T-AACCAAAG--T-------C----A-----GAGCCT-A
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       23459 21 +     44506 T-------A---T-AATCAAAA--C-------C----C-----CAGCTT-G
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        23671 21 +     67491 T-------A---T-AATCAAAA--C-------C----C-----CAGCTT-G
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      13911 21 -     98129 T-------A---T-AAACAAAA--C-------C----C-----CAGCTT-G
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     23511 21 +    147771 T-------A---T-AATCAAAA--C-------C----C-----CAGCTT-G
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                          147 21 -     43940 T-------A---T-AATCAAAA--C-------C----C-----CAGCTT-G
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          4230 21 -     55515 T-------A---T-AAACAAAA--C-------C----C-----CAGCTT-G
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         23584 21 +    152463 T-------A---T-AATCAAAA--C-------C----C-----CAGCTT-G
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       1301 21 -    119457 T-------A---T-AATCAAAA--C-------C----C-----CAGCTT-G
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         13307 21 +    134592 T-------A---T-AATCAAAA--C-------C----C-----CAGCTT-G
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          23894 21 -     75465 T-------A---T-AATCAAAA--C-------C----C-----CAGCTT-G
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              187743 21 -    373494 T-------A---T-AAACAAAG--T-------C----A-----GAGCCT-G
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19808391 21 +  19899266 T-------A---T-AAACAAAG--T-------C----A-----GAGCCT-G
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               6354 21 -     15069 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              6484 21 +     14865 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6849085 21 +  12164890 C-------A---T-AACCAAAG--T-------C----A-----AAGCCT-G
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     19242 21 -     30946 n-------n---n-nnnnnnnn--n-------n----n-----nnnnnn-n
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         4163 21 +     11805 T-------A---T-AACCAAAG--T-------C----G-----AAGCCT-G
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           43506 21 +     52369 T-------A---T-AACCAAAG--T-------C----A-----AAGCCT-G
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         35893 21 -     44753 T-------A---T-AACCAAAG--T-------C----A-----AAGCCT-G
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            17817 21 +     27322 T-------A---T-AACCAAAG--T-------C----A-----AAGCCT-G
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       17453 21 -     53241 T-------A---T-AACCAAAG--T-------C----A-----AAGCCT-G
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         39717 21 -     48185 T-------A---T-AACCAAAG--T-------C----A-----AAGCCT-G
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           35707 26 +     77221 C-------A---T-AAACAAAG--T--agactc----t-----gtgtat-g
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            4565 21 -     27784 T-------A---T-AACCAAAG--T-------C----A-----GAGCct-g
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        247174 21 -    344369 T-------C---T-ATCCAAAG--T-------C----A-----GAGCTT-G
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13246480 19 -  17261082 T-------A---T-AGTCAG----T-------C----A-----GAGTCT-g
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             604431 19 -   3946241 T-------A---T-AATCAG----T-------C----A-----GAGTCT-g
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131534812 21 - 161321710 T-------G---T-AACCGAAG--T-------C----A-----GAGTCT-A
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             30475 21 +     56732 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6806963 21 +   6970761 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             6354 21 +     18040 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                16281 21 +     68503 T-------A---T-AACCAAAG--T-------C----A-----GAGCCT-A
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1788305 21 +   2252614 T-------A---T-AATCAA--AGT-------C----A-----GAGCct-g
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                             764 21 -     17045 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206378241 21 - 206558726 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44857155 21 -  45163003 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                19809 19 +    109198 T-------A---T-AATCAA----T-------C----A-----GAGCCT-G
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       8434 21 +     12214 T-------A---T-AACCAAAG--T-------C----A-----GAGCCT-A
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15673321 21 -  43202129 T-------A---T-AACCAAAG--T-------C----A-----GAACCT-G
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        5234 21 +     34089 T-------A---T-AACCAAAG--T-------C----A-----GAACCT-G
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              5176 21 -     60842 T-------A---T-AACCAAAG--T-------C----A-----GAACCT-G
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              5269 21 +     67014 T-------A---T-AACCAAAG--T-------C----A-----GAACCT-G
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              5247 21 +     60816 T-------A---T-AACCAAAG--T-------C----A-----GAACCT-G
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 5184 21 -     76454 T-------A---T-AACCAAAG--T-------C----A-----GAACCT-G
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17341909 21 -  30362882 T-------A---T-AACCAAAG--C-------C----A-----GAGCTT-G
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         21270 21 -     62485 T-------A---T-AACCAAAG--C-------C----A-----GAGCTT-G
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   32764 21 -    114521 T-------A---A-AACCAAAG--T-------C----A-----GAGCAT-G
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        3967 21 +     15331 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       9360 21 +     20762 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         119363 21 +    130994 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           38149 21 +     46263 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     31269 21 +     42640 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        14309 21 +     30600 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  100771 22 -    120886 C-------T---T-A----AAG--T-AGAC-CT----T-----ATGTGT-G
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            19370 21 +    739146 T-------A---T-AACTAAAG--T-------C----A-----GAGCCT-G
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17766505 24 -  27805282 T-------AAGGA-AACCAAAT--T-------C----A-----GAGTCT-T
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2240250 24 +   2842873 t--ctaT-ATACT-TACCATAG--T-------C----A-----GAG-----
i Spermophilus_dauricus.KZ294190.1                      C 0 I 2
s Spilogale_gracilis.SpiGra_flattened_line_905             235292 21 -    276980 T-------G---T-AACCAAAG--T-------C----A-----GAGCTT-G
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            28070 21 +     62062 T-------G---T-AACCAAAG--T-------C----A-----GGATCT-A
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189272591 21 + 218635234 T-------A---T-AACCAAAG--T-------C----a-----gagaat-a
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        15499 21 -  13920577 T-------A---T-AAACAAAG--T-------C----A-----GAAGCT-G
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                 745 21 +     20549 T-------T---C-AACCAAAG--T-------C----A-----CAGGCT-G
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               15182 21 +     45698 T-------A---T-ATTCAGTG--T-------C----A-----TAGCCT-G
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      807612 21 +   1148477 T-------A---T-AACCAAAG--T-------C----A-----GAGCTT-G
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  58323 21 +     99546 T-------A---T-AACCAAAG--T-------C----A-----GAGCTT-G
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               26981 21 +     42269 T-------A---C-AACCAAAG--T-------C----A-----GAACCT-G
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               60297 21 +     65473 T-------A---C-AACCAAAG--T-------C----A-----GAACCT-G
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194008363 21 - 194193292 T-------A---T-AAACAAAG--G-------G----A-----GAGCCT-G
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             39199 18 -     47444 --------------AATAAAAG--T-------T----A-----GAGCCA-G
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         I 3 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  6003 21 +      6782 T-------A---T-ATTCAATA--T-------T----A-----TAGCCT-G
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  136562 21 -    259118 T-------A---T-AAACAAAG--T-------C----G-----GAGACT-G
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        27465 21 +     38948 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   21197 21 -     32910 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      2583 21 -     12939 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       2519 21 -     14244 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           43918 21 -     54611 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        1721 21 -     11566 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     3898 21 -     15592 T-------A---T-AAACAAAG--A-------C----A-----GAGCCT-G
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          2554 21 +     14371 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                    835 21 +     12481 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                         711 21 -     24393 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       5957 21 -     28054 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44660757 21 -  44834318 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       3065 21 +     13828 T-------A---T-AAACAAAG--G-------C----A-----GAGCCT-G
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   5644 21 +     90398 T-------A---T-AACCAAAG--T-------C----A-----TAGCCT-A
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16085820 21 +  31416278 C-------A---T-ACTCAATG--T-------C----A-----TAGCCT-G
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2793404 21 -   3938065 T-------A---T-AACCAAAG--G-------C----A-----GAGCCT-G
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    5604 21 +     13056 T-------A---T-AACCAAAG--G-------C----A-----GAGCCT-G
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69313909 21 -  96451834 T-------A---T-AACCAAAG--T-------C----A-----GAGCCt-a
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   1811 21 +     10241 T-------A---T-AACCAAAG--T-------T----G-----GAGACT-G
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6515302 21 +  28682327 T-------G---T-AACCAAAG--T-------C----A-----GATCTT-G
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  5782 21 -     20643 C-------A---T-AACCAAAG--T-------C----A-----AAGCCT-G
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             25323 21 -     33872 C-------A---T-AACCAAAG--T-------C----A-----AAGCCT-G
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1525157 20 -   2331223 T-------A---T-AAGTAAAG--T-------C----A-----GAGCCT--
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                138792 21 -    281493 T-------G---T-AACCAAAA--T-------C----A-----GACCTT-G
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       127371 17 -    134049 T-------A---T-TACCAGAG--T-------C----A-----GAG-----
i Xerus_inauris.XerIna_scaffold_7898                    C 0 I 2
s Zalophus_californianus.ZalCal_flattened_line_4097        214775 21 -    227762 T-------G---T-AACCCGAA--T-------T----A-----GATCTT-G
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           7408 21 -      8775 T-------A---T-AACCAAAG--T-------C----A-----GAGCCT-A
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                701732 90 +    802869 I
e Procavia_capensis.ProCapCap_scaffold_149274                2467 1156 -      9567 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Megaderma_lyra.MegLyr_scaffold_3562                       64783 239 -    234502 I
e Heterohyrax_brucei.HetBruBak_scaffold_25354               61360 1157 +     73687 I
e Crocidura_indochinensis.CroInd_scaffold_848148              199  0 +      1327 C
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1008 325 -      5782 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     15998 19 -     20485 I
e Hylobates_klossii.k141_285563                               343 193 +      1026 I
e Microtus_ochrogaster.CM001673.1                        22820341  4 -  98408828 I
e Rattus_norvegicus.chr11                                13915860 1475 +  90463843 I
e Ondatra_zibethicus.OndZib_scaffold_6821                  125594  4 +    145789 I
e Nannospalax_galili.KL201303.1                            119159  6 +    362372 I
e Graphiurus_murinus.GraMur_scaffold_4493                   77863  0 +    118900 C
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I
e Ellobius_talpinus.LOJH01090055.1                           7151  4 -      7838 I
e Ellobius_lutescens.LOEQ01003611.1                        240029  1 -    369425 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               12360 1 +    209709 T
s Acinonyx_jubatus.LLWD01000356.1                         2034494 1 +   3721120 T
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10657830 1 +  23371972 T
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7095178 1 -  16596857 T
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   17409 1 -     22067 T
i Allactaga_bullata.AllBul_scaffold_70162               I 14 I 2
s Allenopithecus_nigroviridis.k141_2469532                   1875 1 -     60446 T
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         2595 1 -     29318 T
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         1530 1 +     38766 T
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          2489 1 -     80423 T
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            10792 1 -     18050 T
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_1710068                                507 1 +      1555 T
i Alouatta_caraya.k141_1710068                          C 0 C 0
s Alouatta_discolor.k141_811576                             11465 1 -     21359 T
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                1086 1 +      2129 T
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_2177643                           470 1 -      1868 T
i Alouatta_macconnelli.k141_2177643                     C 0 C 0
s Alouatta_nigerrima.k141_3537692                             519 1 +      1660 T
i Alouatta_nigerrima.k141_3537692                       C 0 C 0
s Alouatta_palliata.k141_2764429                              434 1 -      1480 T
i Alouatta_palliata.k141_2764429                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            4512 1 -      4927 T
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_1531728                             649 1 -      1692 T
i Alouatta_seniculus.k141_1531728                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3520629 1 +   4113121 T
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      391035 1 -    631301 T
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            31211 1 +     33004 T
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 63144 1 +     78111 T
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            6086 1 +     22701 T
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5750043 1 +   9889416 T
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             6632 1 -    104377 T
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               6634 1 +     23246 T
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     4182 1 +      5067 T
i Aplodontia_rufa.AprRuf_scaffold_156013                I 2 I 2
s Arctocebus_calabarensis.k141_587554                        1541 1 +      9265 T
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 9456 1 -     29036 T
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9539903 1 +  39197703 T
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             61174 1 +     85812 T
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                12187 1 +     89302 T
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             16690 1 -     58268 T
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             64682 1 +    119057 T
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               6653 1 -     25888 T
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 7269 1 -     16375 T
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                                887 1 +      6337 T
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26380703 1 +  51448160 c
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        5875 1 -     13118 c
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   43739 1 -     72089 T
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6560359 1 +   6870073 T
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138140470 1 - 161108492 T
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     573011 1 -    998990 T
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136296203 1 - 158972876 T
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1233283 1 -   1914593 T
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               114540 1 -    171031 T
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 13569 1 +    125063 T
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                15612 1 -    216513 T
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        8155 1 -    134917 T
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3220072 1 -   8989139 t
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           397773 1 -  15254737 t
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2973509 1 +   6889770 t
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11519975 1 +  39901454 T
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   15000 1 +     87036 T
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11266642 1 -  35597290 T
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11089176 1 +  39895921 T
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16456191 1 -  44759192 T
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21325704 1 + 157394656 T
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135706932 1 - 157403528 T
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          309549 1 +    345090 T
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               60235 1 +     67245 C
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   31624 1 +     33760 T
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   159392 1 -    276539 C
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15787155 1 -  24422027 T
i Cavia_aperea.AVPZ01000278.1                           C 0 I 2
s Cavia_porcellus.DS562889.1                             15799091 1 -  24440124 T
i Cavia_porcellus.DS562889.1                            C 0 I 2
s Cavia_tschudii.CavTsc_scaffold_488                       177282 1 +    436027 T
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 I 2
s Cebus_albifrons.Contig22                               18891385 1 -  29618158 T
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 8929 1 -     26817 T
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                13172 1 +     25043 T
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         8573 1 +     21754 T
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4364391 1 +   7569818 t
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         4148 1 -      9338 T
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6555821 1 +   6739814 T
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      27298 1 +     60454 T
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          2504 1 -     21101 T
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         59813 1 -    107033 T
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        2703 1 -     17608 T
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          30199 1 +     30494 T
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          59044 1 -     59240 T
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          2745 1 +     16677 T
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           24904 1 +     35983 T
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11991430 1 +  12117833 T
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46478190 1 +  46592721 T
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      41740 1 -     45581 T
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       2746 1 +     35577 T
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        2521 1 -     25661 T
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        2499 1 -     17744 T
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        22116 1 +     37128 T
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           59549 1 -     68416 T
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            8594 1 +     13308 T
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             6197 1 -     18223 T
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             23215 1 +     25473 T
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           42255 1 +     57117 T
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          46934 1 +     54541 T
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15962242 1 +  43084221 G
i Chinchilla_lanigera.JH721867.1                        C 0 I 2
s Chiropotes_israelita.k141_1189915                         71741 1 +    196370 T
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          15921 1 +     40510 T
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15140109 1 -  15256731 T
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      34724 1 -     53260 T
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101145277 1 + 101219884 T
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                16971 1 -     21363 T
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           762274 1 +    964067 T
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10887041 1 +  10971483 T
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147665206 1 + 156195979 T
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            17191 1 +     23629 T
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60614103 1 +  78930452 t
i Condylura_cristata.JH655880.1                         I 8 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 279045 1 -    399297 T
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 I 2
s Cryptoprocta_ferox.CryFer_flattened_line_19014            52530 1 -     70449 T
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 31167 1 -     67205 T
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 I 422
s Cuniculus_paca.CunPac_flattened_line_16637                18283 1 +     26546 T
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 I 2
s Dasyprocta_punctata.DasPun_flattened_line_634             59375 1 -    236241 T
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 I 2
s Daubentonia_madagascariensis.ctg11                     16845416 1 +  31942871 T
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80037327 1 -  96802777 t
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18699514 1 -  18957592 t
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 323044 1 +    993696 t
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   3695 1 +    151128 T
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   157510 1 +    228994 T
i Dinomys_branickii.DinBra_scaffold_1996                C 0 I 2
s Dipodomys_ordii.KN672545.1                              3656829 1 +   4240102 T
i Dipodomys_ordii.KN672545.1                            C 0 I 8
s Dipodomys_stephensi.DipSte_scaffold_44365                 28472 1 +     28912 T
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 I 8
s Dolichotis_patagonum.DolPat_scaffold_14102                36599 1 -     73477 T
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 I 2
s Echinops_telfairi.JH980316.1                           22999432 1 -  44670279 T
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 12762 1 +     24177 t
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1491975 1 +   1727528 t
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7816950 1 +  15467074 A
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85872704 1 +  99434291 T
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4705082 1 +   6522550 T
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5853492 1 -   7175178 t
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13351997 1 +  41866177 t
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          13486 1 +     92910 t
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11534775 1 +  16010500 c
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48776159 1 -  48907691 T
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          315543 1 +    330699 T
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             61996 1 +     89355 T
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              5591 1 +     13586 T
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               5522 1 -      6809 T
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            11999 1 +     36558 T
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             8320 1 +     60246 T
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                11796 1 +    109717 T
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               16182 1 +     16540 T
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                16457 1 +     27497 T
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           18914 1 +     26808 T
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                33652 1 +     46535 T
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              16376 1 -     29447 T
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129893449 1 - 159252932 T
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129280541 1 - 158578461 T
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 21681 1 +     52776 T
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Galago_moholi.ctg555                                     211443 1 -    847004 T
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           13817 1 -     43889 T
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          10885 1 +     27357 T
i Galagoides_demidoff.k141_1769638                      I 7 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               156812 1 +    324696 T
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    181774 1 -    189561 T
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           14266 1 -     18683 T
i Glis_glis.GliGli_scaffold_79770                       I 697 I 2
s Gorilla_beringei.k141_111300                               5878 1 -     14630 T
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119652978 1 - 195582420 T
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         2368 1 +     10286 T
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                              845 1 -     11661 T
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             6174 1 +     56096 T
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        29425 1 -     42470 T
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        46048 1 -     54384 T
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              17736 1 +     53719 T
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                27989 1 -     91191 T
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2551606 1 +  31725842 T
i Heterocephalus_glaber.JH602058.1                      C 0 I 2
s Hippopotamus_amphibius.HipAmp_scaffold_1308              147635 1 +    277961 T
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      278904 1 -    477199 t
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              8050 1 -      9143 T
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      5565 1 -   7690867 T
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 17805 1 -     67322 T
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19506 1 -    119109 T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 I 2
s Hylobates_abbotti.k141_164775                               369 1 -      2073 T
i Hylobates_abbotti.k141_164775                         C 0 C 0
s Hylobates_agilis.k141_1878600                               606 1 -      1230 T
i Hylobates_agilis.k141_1878600                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14625259 1 -  25970782 T
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            2515 1 -      2977 T
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             34418 1 -     60944 T
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     6676 1 +     22540 T
i Hystrix_cristata.HysCri_scaffold_50788                C 0 I 2
s Ictidomys_tridecemlineatus.JH393315.1                   7126360 1 +  13083262 T
i Ictidomys_tridecemlineatus.JH393315.1                 I 2 I 2
s Indri_indri.k141_5141390                                    902 1 -      3181 T
i Indri_indri.k141_5141390                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               9532 1 +     17520 T
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8566422 1 +  11848649 t
i Jaculus_jaculus.JH725517.1                            I 14 I 2
s Kogia_breviceps.KogBre_flattened_line_35920               24142 1 +     37189 T
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          50772 1 -    147782 T
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                     839 1 +     26176 T
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258407729 1 - 285822530 T
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        24487 1 +     39228 T
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            53871 1 +     63517 T
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        79135 1 +    116806 T
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     32126 1 -     33031 T
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3086496 1 -   3498232 t
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    13779 1 +     22452 T
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            136489 1 +   3060487 t
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19248915 1 +  19376315 T
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           11192 1 +     84689 T
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3778941 1 +   6799190 T
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20595320 1 -  62548349 T
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11088632 1 +  39895028 T
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             20650 1 +     74745 T
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12707107 1 +  12821369 T
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                2749 1 -      3136 T
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           47564 1 +     63263 T
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                 2272 1 -      2568 T
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 2857 1 -      7381 T
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  46074 1 -     79256 T
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196036181 1 + 196197964 T
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11446351 1 +  11645122 T
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   5021 1 -     46448 T
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                2695 1 -     13212 T
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 16374 1 -     55006 T
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43841490 1 +  43892939 T
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               17660 1 -     24607 T
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               5026 1 -     27140 T
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43438075 1 -  43563597 T
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4450895 1 -   4543643 T
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            146576 1 +    252755 G
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             36719 1 +     58827 G
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36874180 1 +  64221397 T
i Marmota_marmota.CZRN01000005.1                        I 5 I 2
s Mellivora_capensis.MelCap_flattened_line_15433             1516 1 -     87323 T
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_227248                    816 1 -      1377 T
i Mesoplodon_bidens.MesBid_scaffold_227248              C 0 C 0
s Microcebus_murinus.CM007691.1                          16510761 1 +  47401472 T
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  35432 1 -     48017 T
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               23426 1 -     32043 T
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8210584 1 +  10048721 t
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            35073 1 +     45743 T
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         2624 1 +     29742 T
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        12012 1 -    104932 T
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     6148 1 +      8497 T
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 146917 1 +    154973 T
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                161946 1 +    265003 T
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  2005 1 -     19904 T
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  145431 1 -    168139 T
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          20047 1 -    100666 T
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             12548 1 +     98495 T
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 226 I 2
s Mustela_putorius.JH417978.1                             4424885 1 -  28371801 T
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     90458 1 -    117718 T
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 I 170
s Myotis_brandtii.KE161952.1                               968576 1 +   8389877 T
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5020251 1 +   6462685 T
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3466160 1 -   3747815 T
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        11370 1 +     66751 T
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             5537 1 -      8794 T
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nasalis_larvatus.k141_153429                               9131 1 +     48152 T
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4485402 1 -  14209539 t
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3951529 1 -   4490290 t
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Nomascus_annamensis.k141_720788                             513 1 -      1065 T
i Nomascus_annamensis.k141_720788                       C 0 C 0
s Nomascus_concolor.k141_581629                                76 1 -      6578 T
i Nomascus_concolor.k141_581629                         C 0 C 0
s Nomascus_gabriellae.k141_1004198                            384 1 +      1448 T
i Nomascus_gabriellae.k141_1004198                      C 0 C 0
s Nomascus_siki_b.tarseq_80                             25535 1 -  18771707 T
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_1035055                                  130 1 -      3602 T
i Nomascus_siki_a.k141_1035055                            n 1 I 291
s Nyctereutes_procyonoides.CAJHUB010000786.1                31433 1 +   3668941 T
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65567636 1 -  95554990 T
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            4362 1 +      6470 T
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65669971 1 +  89412551 T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4996526 1 -  23139505 T
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3685990 1 +  10294119 G
i Octodon_degus.JH651621.1                              C 0 I 421
s Odobenus_rosmarus.KB229369.1                             680069 1 -   3126709 T
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         37502 1 +     78940 T
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Orcinus_orca.KB316965.1                                 7225214 1 -   7562323 T
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              58544 1 -     66828 T
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141876813 1 + 163896628 T
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      308717 1 -    505867 T
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        1261 1 -     53940 T
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18009241 1 -  38779656 T
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134077780 1 - 275406953 T
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      78995 1 +    140051 T
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127575244 1 - 205426864 T
i Pan_paniscus.CM003386.1                               I 21 C 0
s Pan_troglodytes.CM009241.2                            120152398 1 - 196562556 T
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  34819 1 +    295523 T
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3638553 1 +  18214204 T
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5028228 1 -   6340057 T
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1066630 1 -   1292953 T
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188156862 1 - 188283584 T
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             5179 1 +      5367 T
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47514247 1 +  47705337 T
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 68223 1 -    104429 T
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    6759 1 +     14967 T
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 2618 1 -      7628 T
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    116310 1 -    135482 T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           5950 1 -     23713 T
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            25263 1 -     27972 T
i Perodicticus_potto.k141_713187                        C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    13991 1 -     36578 T
i Petromus_typicus.PetTyp_scaffold_33007                C 0 I 2
s Phocoena_phocoena.PhoPho_flattened_line_11948            121819 1 -    122454 T
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1987485                           2645 1 -      5908 T
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       3269 1 -     17985 T
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            2636 1 +      7694 T
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26741114 1 +  26888534 T
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            98427 1 +    112873 T
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             44378 1 -     61926 C
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        25763 1 +     78826 C
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              9810 1 -     15800 C
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        13009 1 -     16101 C
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          6237 1 +      9673 C
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13475237 1 -  19735023 C
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           14140 1 -     31692 C
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           5905 1 +     21690 T
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       23480 1 +     44506 T
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        23692 1 +     67491 T
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      13932 1 -     98129 T
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     23532 1 +    147771 T
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                          168 1 -     43940 T
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          4251 1 -     55515 T
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         23605 1 +    152463 T
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       1322 1 -    119457 T
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         13328 1 +    134592 T
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          23915 1 -     75465 T
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              187764 1 -    373494 T
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19808412 1 +  19899266 T
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               6375 1 -     15069 T
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              6505 1 +     14865 T
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6849106 1 +  12164890 T
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     19263 1 -     30946 n
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         4184 1 +     11805 T
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           43527 1 +     52369 T
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         35914 1 -     44753 T
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            17838 1 +     27322 T
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       17474 1 -     53241 T
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         39738 1 -     48185 T
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Pteronotus_parnellii.KE867983.1                            4586 1 -     27784 t
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        247195 1 -    344369 T
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13246499 1 -  17261082 t
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             604450 1 -   3946241 t
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131534833 1 - 161321710 T
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             30496 1 +     56732 T
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6806984 1 +   6970761 T
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             6375 1 +     18040 T
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                16302 1 +     68503 T
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1788326 1 +   2252614 t
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                             785 1 -     17045 T
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206378262 1 - 206558726 T
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44857176 1 -  45163003 T
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                19828 1 +    109198 T
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       8455 1 +     12214 T
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15673342 1 -  43202129 T
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        5255 1 +     34089 T
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              5197 1 -     60842 T
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              5290 1 +     67014 T
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              5268 1 +     60816 T
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 5205 1 -     76454 T
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17341930 1 -  30362882 T
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         21291 1 -     62485 T
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   32785 1 -    114521 T
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        3988 1 +     15331 T
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       9381 1 +     20762 T
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         119384 1 +    130994 T
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           38170 1 +     46263 T
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     31290 1 +     42640 T
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        14330 1 +     30600 T
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            19391 1 +    739146 G
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17766529 1 -  27805282 G
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2240276 1 +   2842873 T
i Spermophilus_dauricus.KZ294190.1                      I 2 I 2
s Spilogale_gracilis.SpiGra_flattened_line_905             235313 1 -    276980 T
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            28091 1 +     62062 T
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189272612 1 + 218635234 t
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        15520 1 -  13920577 T
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                 766 1 +     20549 T
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               15203 1 +     45698 T
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      807633 1 +   1148477 T
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  58344 1 +     99546 T
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               27002 1 +     42269 T
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               60318 1 +     65473 T
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194008384 1 - 194193292 T
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             39217 1 -     47444 T
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 I 2
s Tonatia_saurophila.TonSau_scaffold_3334                  136583 1 -    259118 T
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        27486 1 +     38948 T
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   21218 1 -     32910 T
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      2604 1 -     12939 T
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       2540 1 -     14244 T
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           43939 1 -     54611 T
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        1742 1 -     11566 T
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     3919 1 -     15592 T
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          2575 1 +     14371 T
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                    856 1 +     12481 T
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                         732 1 -     24393 T
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       5978 1 -     28054 T
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44660778 1 -  44834318 T
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       3086 1 +     13828 T
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   5665 1 +     90398 T
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16085841 1 +  31416278 T
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2793425 1 -   3938065 t
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    5625 1 +     13056 T
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69313930 1 -  96451834 t
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   1832 1 +     10241 T
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6515323 1 +  28682327 T
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  5803 1 -     20643 T
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             25344 1 -     33872 T
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1525177 1 -   2331223 T
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                138813 1 -    281493 T
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       127390 1 -    134049 T
i Xerus_inauris.XerIna_scaffold_7898                    I 2 I 2
s Zalophus_californianus.ZalCal_flattened_line_4097        214796 1 -    227762 T
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           7429 1 -      8775 T
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                701732 90 +    802869 I
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           3285 0 -      6963 C
e Perognathus_longimembris.PerPac_flattened_line_19359        338 0 +     49596 C
e Tolypeutes_matacus.TolMat_scaffold_269431                  6024 0 +      6782 C
e Procavia_capensis.ProCapCap_scaffold_149274                2467 1156 -      9567 I
e Odocoileus_virginianus.KZ101650.1                       1080205 0 +   1425656 C
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Megaderma_lyra.MegLyr_scaffold_3562                       64783 239 -    234502 I
e Heterohyrax_brucei.HetBruBak_scaffold_25354               61360 1157 +     73687 I
e Dasypus_novemcinctus.JH568778.1                          184152 0 -   6883506 C
e Crocidura_indochinensis.CroInd_scaffold_848148              199 0 +      1327 C
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1008 325 -      5782 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     15998 19 -     20485 I
e Hylobates_klossii.k141_285563                               343 193 +      1026 I
e Microtus_ochrogaster.CM001673.1                        22820341 4 -  98408828 I
e Sigmodon_hispidus.SigHis_scaffold_11332                  100793 0 -    120886 C
e Rattus_norvegicus.chr11                                13915860 1475 +  90463843 I
e Psammomys_obesus.NESX01026517.1                           35733 0 +     77221 C
e Peromyscus_maniculatus.KI615518.1                       4950855 0 -   8017169 C
e Onychomys_torridus.OnyTor_scaffold_12578                  37608 0 +     62360 C
e Ondatra_zibethicus.OndZib_scaffold_6821                  125594 4 +    145789 I
e Nannospalax_galili.KL201303.1                            119159 6 +    362372 I
e Mus_spretus.CM004110.1                                 74331286 0 +  97876770 C
e Mus_pahari.LT608305.1                                  67556349 0 +  89017189 C
e Mus_musculus.chr16                                     75490111 0 +  98207768 C
e Mus_caroli.LT608236.1                                  70767051 0 +  92629107 C
e Mesocricetus_auratus.KB708139.1                         1047417 0 -  26018355 C
e Meriones_unguiculatus.MerUng_scaffold_52233               13450 0 +     15977 C
e Graphiurus_murinus.GraMur_scaffold_4493                   77863 0 +    118900 C
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I
e Ellobius_talpinus.LOJH01090055.1                           7151 4 -      7838 I
e Ellobius_lutescens.LOEQ01003611.1                        240029 1 -    369425 I
e Ctenodactylus_gundi.CteGun_scaffold_447                  208933 1 -    956709 I
e Cricetulus_griseus.LT883672.1                          53029731 0 +  72327488 C
e Acomys_cahirinus.AcoCah_scaffold_1625                    113072 0 -    189883 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               12361 5 +    209709 GTG---AT
s Acinonyx_jubatus.LLWD01000356.1                         2034495 5 +   3721120 GTG---AT
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    113072 2 -    189883 -tg-----
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10657831 5 +  23371972 GGA---CT
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7095179 5 -  16596857 GGA---AT
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   17412 3 -     22067 ATT-----
i Allactaga_bullata.AllBul_scaffold_70162               I 2 C 0
s Allenopithecus_nigroviridis.k141_2469532                   1876 5 -     60446 GTG---AT
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         2596 5 -     29318 GTG---AT
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         1531 5 +     38766 GTG---AT
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          2490 5 -     80423 GTG---AT
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            10793 5 -     18050 GAG---AT
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_1710068                                508 5 +      1555 GAG---AT
i Alouatta_caraya.k141_1710068                          C 0 C 0
s Alouatta_discolor.k141_811576                             11466 5 -     21359 GAG---AT
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                1087 5 +      2129 GAG---GT
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_2177643                           471 5 -      1868 GAG---AT
i Alouatta_macconnelli.k141_2177643                     C 0 C 0
s Alouatta_nigerrima.k141_3537692                             520 5 +      1660 GAG---AT
i Alouatta_nigerrima.k141_3537692                       C 0 C 0
s Alouatta_palliata.k141_2764429                              435 5 -      1480 GAG---AT
i Alouatta_palliata.k141_2764429                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            4513 5 -      4927 GAG---AT
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_1531728                             650 5 -      1692 GAG---AT
i Alouatta_seniculus.k141_1531728                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3520630 5 +   4113121 GTG---AT
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      391036 5 -    631301 ATA---AT
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            31212 5 +     33004 GTG---AT
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 63145 5 +     78111 GAG---CT
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            6087 5 +     22701 GAG---CT
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5750044 5 +   9889416 GAG---CT
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             6633 5 -    104377 GAG---CT
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               6635 5 +     23246 GAG---CT
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     4185 5 +      5067 GTG---AT
i Aplodontia_rufa.AprRuf_scaffold_156013                I 2 C 0
s Arctocebus_calabarensis.k141_587554                        1542 5 +      9265 GTG---GT
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 9457 5 -     29036 ATA---AT
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9539904 5 +  39197703 GAG---AT
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             61175 5 +     85812 GAG---AT
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                12188 5 +     89302 GAG---AT
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             16691 5 -     58268 GAG---AT
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             64683 5 +    119057 GAG---AT
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               6654 5 -     25888 GAG---AT
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 7270 5 -     16375 GTG---AT
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                                888 5 +      6337 GTG---AT
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26380704 5 +  51448160 gta---at
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        5876 5 -     13118 gta---at
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   43740 5 -     72089 GTG---AT
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6560360 5 +   6870073 GTG---AT
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138140471 5 - 161108492 GTG---AT
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     573012 5 -    998990 GTG---AT
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136296204 5 - 158972876 GTG---AT
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1233284 5 -   1914593 GTG---AT
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               114541 5 -    171031 GAG---AT
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 13570 5 +    125063 GAG---AT
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                15613 5 -    216513 GAG---AT
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        8156 5 -    134917 GAG---AT
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3220073 5 -   8989139 gca---at
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           397774 5 -  15254737 gca---at
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2973510 5 +   6889770 gca---at
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11519976 5 +  39901454 GTA---AT
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   15001 5 +     87036 GTA---AT
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11266643 5 -  35597290 GTA---AT
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11089177 5 +  39895921 GTA---AT
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16456192 5 -  44759192 GTA---AT
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21325705 5 + 157394656 GTG---AT
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135706933 5 - 157403528 GTG---AT
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          309550 5 +    345090 GTG---AT
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               60236 5 +     67245 ATA---AT
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   31625 5 +     33760 GTG---GT
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   159393 5 -    276539 ATA---AT
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15787158 5 -  24422027 GTG---AT
i Cavia_aperea.AVPZ01000278.1                           I 2 C 0
s Cavia_porcellus.DS562889.1                             15799094 5 -  24440124 GTG---AT
i Cavia_porcellus.DS562889.1                            I 2 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       177285 5 +    436027 GTG---AT
i Cavia_tschudii.CavTsc_scaffold_488                    I 2 C 0
s Cebus_albifrons.Contig22                               18891386 5 -  29618158 GAG---CT
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 8930 5 -     26817 GAG---CT
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                13173 5 +     25043 GAG---CT
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         8574 5 +     21754 GTG---GT
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4364392 4 +   7569818 gt----at
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         4149 4 -      9338 GT----AT
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6555822 5 +   6739814 GTG---AT
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      27299 5 +     60454 GTG---AT
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          2505 5 -     21101 GTG---AT
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         59814 5 -    107033 GTG---AT
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        2704 5 -     17608 GTG---AT
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          30200 5 +     30494 GTG---AT
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          59045 5 -     59240 GTG---AT
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          2746 5 +     16677 GTG---AT
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           24905 5 +     35983 GTG---AT
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11991431 5 +  12117833 GTG---AT
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46478191 5 +  46592721 GTG---AT
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      41741 5 -     45581 GTG---AT
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       2747 5 +     35577 GTG---AT
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        2522 5 -     25661 GTG---AT
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        2500 5 -     17744 GTG---AT
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        22117 5 +     37128 GTG---AT
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           3285 4 -      6963 -TG---AT
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           59550 5 -     68416 GTG---AT
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            8595 5 +     13308 GTG---AT
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             6198 5 -     18223 GAG---AT
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             23216 5 +     25473 GAG---AT
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           42256 5 +     57117 GAG---AT
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          46935 5 +     54541 GAG---AT
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15962245 5 +  43084221 GTG---AT
i Chinchilla_lanigera.JH721867.1                        I 2 C 0
s Chiropotes_israelita.k141_1189915                         71742 5 +    196370 GAG---AT
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          15922 5 +     40510 GAG---AT
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15140110 5 -  15256731 GTG---AT
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      34725 5 -     53260 GTG---AT
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101145278 5 + 101219884 GTG---AT
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                16972 5 -     21363 GTG---AT
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           762275 5 +    964067 GTG---AT
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10887042 5 +  10971483 GTG---AT
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147665207 5 + 156195979 GTG---AT
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            17192 5 +     23629 GTG---AT
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60614104 5 +  78930452 gta---at
i Condylura_cristata.JH655880.1                         C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 279048 3 -    399297 GTG-----
i Cricetomys_gambianus.CriGam_scaffold_949              I 2 C 0
s Cricetulus_griseus.LT883672.1                          53029731 2 +  72327488 -TG-----
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            52531 5 -     70449 GTA---AT
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  208934 5 -    956709 CTG---AT
i Ctenodactylus_gundi.CteGun_scaffold_447               I 1 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 31590 5 -     67205 gat---tt
i Ctenomys_sociabilis.CteSoc_scaffold_19489             I 422 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                18286 5 +     26546 GTG---AT
i Cuniculus_paca.CunPac_flattened_line_16637            I 2 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             59378 5 -    236241 GTG---AT
i Dasyprocta_punctata.DasPun_flattened_line_634         I 2 C 0
s Dasypus_novemcinctus.JH568778.1                          184152 4 -   6883506 -TG---AT
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16845417 5 +  31942871 ATG---AT
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80037328 5 -  96802777 gta---at
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18699515 5 -  18957592 ata---at
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 323045 4 +    993696 gt----at
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   3696 4 +    151128 GT----AT
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   157513 5 +    228994 AAG---AT
i Dinomys_branickii.DinBra_scaffold_1996                I 2 C 0
s Dipodomys_ordii.KN672545.1                              3656838 8 +   4240102 GTGGaggc
i Dipodomys_ordii.KN672545.1                            I 8 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 28481 8 +     28912 GTGGAGGC
i Dipodomys_stephensi.DipSte_scaffold_44365             I 8 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                36602 5 -     73477 ATG---AT
i Dolichotis_patagonum.DolPat_scaffold_14102            I 2 C 0
s Echinops_telfairi.JH980316.1                           22999433 5 -  44670279 GTG---AT
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 12763 5 +     24177 gta---at
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1491976 5 +   1727528 gta---at
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7816951 5 +  15467074 GTA---AT
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85872705 5 +  99434291 GGA---GT
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4705083 5 +   6522550 GTA---AT
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5853493 4 -   7175178 gt----at
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13351998 4 +  41866177 gt----at
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          13487 4 +     92910 gt----at
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11534776 5 +  16010500 att---at
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48776160 5 -  48907691 GTG---AT
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          315544 5 +    330699 GTA---AT
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             61997 5 +     89355 GTA---AT
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              5592 5 +     13586 GTG---AT
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               5523 5 -      6809 GTG---AT
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            12000 5 +     36558 GTG---AT
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             8321 5 +     60246 GTG---AT
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                11797 5 +    109717 GTG---AT
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               16183 5 +     16540 GTG---AT
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                16458 5 +     27497 GTG---AT
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           18915 5 +     26808 GTG---AT
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                33653 5 +     46535 GTG---AT
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              16377 5 -     29447 GTG---AT
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129893450 5 - 159252932 GTG---AT
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129280542 5 - 158578461 GTG---AT
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 21682 5 +     52776 GTG---AT
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Galago_moholi.ctg555                                     211444 5 -    847004 GTG---GT
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           13818 5 -     43889 GTG---GT
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          10886 5 +     27357 GTG---GT
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               156813 5 +    324696 GTG---AT
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    181775 5 -    189561 GTG---AT
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           14269 5 -     18683 GTG---AT
i Glis_glis.GliGli_scaffold_79770                       I 2 C 0
s Gorilla_beringei.k141_111300                               5879 5 -     14630 GTG---AT
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119652979 5 - 195582420 GTG---AT
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         2369 5 +     10286 GTG---AT
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                              846 5 -     11661 GTG---AT
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             6175 5 +     56096 GTG---AT
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        29426 5 -     42470 GTG---AT
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        46049 5 -     54384 GTG---AT
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              17737 3 +     53719 GTA-----
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                27990 5 -     91191 GTG---AT
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2551609 5 +  31725842 gtg---at
i Heterocephalus_glaber.JH602058.1                      I 2 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              147636 5 +    277961 GTA---AT
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      278905 5 -    477199 ata---at
i Hipposideros_armiger.JXIK01001085.1                   C 0 I 2
s Hipposideros_galeritus.HipGal_scaffold_104691              8051 5 -      9143 ATA---AC
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 I 2
s Hoolock_leuconedys.ctg79                                      5566 5 -   7690867 GTG---AG
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 17806 5 -     67322 GTA---AT
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19509 5 -    119109 GTG---AT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       I 2 C 0
s Hylobates_abbotti.k141_164775                               370 5 -      2073 GTG---AC
i Hylobates_abbotti.k141_164775                         C 0 C 0
s Hylobates_agilis.k141_1878600                               607 5 -      1230 GTG---AC
i Hylobates_agilis.k141_1878600                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14625260 5 -  25970782 GTG---AC
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            2516 5 -      2977 GTG---AC
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             34419 5 -     60944 GTG---AC
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     6679 5 +     22540 ATG---AC
i Hystrix_cristata.HysCri_scaffold_50788                I 2 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7126363 5 +  13083262 Gtg---at
i Ictidomys_tridecemlineatus.JH393315.1                 I 2 C 0
s Indri_indri.k141_5141390                                    903 5 -      3181 GTG---AT
i Indri_indri.k141_5141390                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               9533 5 +     17520 GTA---AT
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8566425 3 +  11848649 att-----
i Jaculus_jaculus.JH725517.1                            I 2 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               24143 5 +     37189 GTA---AT
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          50773 5 -    147782 GAG---AT
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                     840 5 +     26176 GTA---AT
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258407730 5 - 285822530 GTG---AT
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        24488 5 +     39228 GTG---AT
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            53872 5 +     63517 GTG---AT
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        79136 5 +    116806 GTG---AT
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     32127 5 -     33031 GTG---AT
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3086497 2 -   3498232 gg------
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    13780 5 +     22452 GTA---AT
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            136490 5 +   3060487 gta---at
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19248916 5 +  19376315 GTG---AT
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           11193 5 +     84689 GTG---GT
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3778942 5 +   6799190 GTG---GT
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20595321 5 -  62548349 GTG---AT
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11088633 5 +  39895028 GTA---AT
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             20651 5 +     74745 GTG---AT
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12707108 5 +  12821369 GTG---AT
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                2750 5 -      3136 GTG---AT
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           47565 5 +     63263 GTG---AT
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                 2273 5 -      2568 GTG---AT
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 2858 5 -      7381 GTG---AT
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  46075 5 -     79256 GTG---AT
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196036182 5 + 196197964 GTG---AT
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11446352 5 +  11645122 GTG---AT
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   5022 5 -     46448 GTG---AT
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                2696 5 -     13212 GTG---AT
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 16375 5 -     55006 GTG---AT
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43841491 5 +  43892939 GTG---AT
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               17661 5 -     24607 GTG---AT
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               5027 5 -     27140 GTG---AT
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43438076 5 -  43563597 GTG---AT
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4450896 5 -   4543643 GTG---AT
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            146577 5 +    252755 GTA---GT
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             36720 5 +     58827 GTA---GT
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36874183 5 +  64221397 GTG---GT
i Marmota_marmota.CZRN01000005.1                        I 2 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             1517 5 -     87323 GGA---GT
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               13450 2 +     15977 -TG-----
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1047417 2 -  26018355 -TG-----
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_227248                    817 5 -      1377 GTA---AT
i Mesoplodon_bidens.MesBid_scaffold_227248              C 0 C 0
s Microcebus_murinus.CM007691.1                          16510762 5 +  47401472 gtg---at
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  35433 5 -     48017 GTG---AT
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               23427 5 -     32043 ATA---AT
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8210585 5 +  10048721 gta---at
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            35074 5 +     45743 GTA---AT
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         2625 5 +     29742 GTG---AT
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        12013 2 -    104932 GG------
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     6149 5 +      8497 GTG---AT
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 146918 5 +    154973 GTA---AT
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                161947 5 +    265003 ATA---GT
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  2006 5 -     19904 GTG---AT
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  145432 3 -    168139 GTA-----
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          20048 5 -    100666 GTA---AT
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70767051 2 +  92629107 -TA-----
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75490111 2 +  98207768 -TA-----
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67556349 2 +  89017189 -ta-----
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74331286 2 +  97876770 -TA-----
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             12551 5 +     98495 GTG---AT
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 2 C 0
s Mustela_putorius.JH417978.1                             4424886 5 -  28371801 GGA---GT
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     90629 5 -    117718 GTT---TC
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 170 C 0
s Myotis_brandtii.KE161952.1                               968577 5 +   8389877 GTA---AT
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5020252 5 +   6462685 GTA---AT
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3466161 5 -   3747815 GTA---AA
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        11371 5 +     66751 GTA---AT
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             5538 5 -      8794 GTG---AT
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nasalis_larvatus.k141_153429                               9132 5 +     48152 GTG---AT
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4485403 2 -  14209539 gg------
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3951530 5 -   4490290 gta---at
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Nomascus_annamensis.k141_720788                             514 5 -      1065 GTG---AT
i Nomascus_annamensis.k141_720788                       C 0 C 0
s Nomascus_concolor.k141_581629                                77 5 -      6578 GTG---AT
i Nomascus_concolor.k141_581629                         C 0 C 0
s Nomascus_gabriellae.k141_1004198                            385 5 +      1448 GTG---AC
i Nomascus_gabriellae.k141_1004198                      C 0 C 0
s Nomascus_siki_b.tarseq_80                             25536 5 -  18771707 GTG---AT
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  3239 5 +      4512 GTG---AT
i Nomascus_siki_a.k141_595747                             I 1 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                31434 5 +   3668941 GTA---AT
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65567637 5 -  95554990 GTG---GT
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            4363 5 +      6470 GTG---GT
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65669972 5 +  89412551 GTG---GT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4996527 5 -  23139505 GTG---TT
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3686412 5 +  10294119 GTT---TT
i Octodon_degus.JH651621.1                              I 421 C 0
s Odobenus_rosmarus.KB229369.1                             680070 2 -   3126709 GG------
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         37503 5 +     78940 GTG---AT
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  37608 2 +     62360 -TG-----
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7225215 5 -   7562323 GTG---AT
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              58545 5 -     66828 GGG---AT
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141876814 5 + 163896628 GTG---AT
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      308718 5 -    505867 GTA---AT
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        1262 5 -     53940 GTG---GT
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18009242 5 -  38779656 GTG---GT
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134077781 5 - 275406953 GTG---AT
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      78996 5 +    140051 GTG---AT
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127575245 5 - 205426864 GTG---AT
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120152399 5 - 196562556 GTG---AT
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  34820 5 +    295523 GTG---AT
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3638554 5 +  18214204 GTG---AT
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5028229 5 -   6340057 GTG---AT
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1066631 5 -   1292953 GTG---AT
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188156863 5 - 188283584 GTG---AT
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             5180 5 +      5367 GTG---AT
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47514248 5 +  47705337 GTG---AT
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 68224 5 -    104429 GTG---AT
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    6760 5 +     14967 GTG---AT
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 2619 5 -      7628 GTG---AT
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    116311 5 -    135482 GTA---AT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           5951 5 -     23713 GTG---GT
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            25264 5 -     27972 GTG---GT
i Perodicticus_potto.k141_713187                        C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4950855 2 -   8017169 -TG-----
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    13994 5 -     36578 ATG---AT
i Petromus_typicus.PetTyp_scaffold_33007                I 2 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            121820 5 -    122454 GTA---AT
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1987485                           2646 5 -      5908 GTG---AT
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       3270 5 -     17985 GTG---AT
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            2637 5 +      7694 GTG---AT
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26741115 5 +  26888534 GTG---AT
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            98428 5 +    112873 GTA---AT
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             44379 5 -     61926 GAG---AT
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        25764 5 +     78826 GAG---AT
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              9811 5 -     15800 GAG---AT
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        13010 5 -     16101 GAG---AT
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          6238 5 +      9673 GAG---AT
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13475238 5 -  19735023 GAG---AT
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           14141 5 -     31692 GAG---AT
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           5906 5 +     21690 GTA---AT
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       23481 5 +     44506 GAG---AT
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        23693 5 +     67491 GAG---AT
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      13933 5 -     98129 GAG---AT
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     23533 5 +    147771 GAG---AT
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                          169 5 -     43940 GAG---AT
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          4252 5 -     55515 GAG---AT
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         23606 5 +    152463 GAG---AT
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       1323 5 -    119457 GAG---AT
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         13329 5 +    134592 GAG---AT
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          23916 5 -     75465 GAG---AT
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              187765 5 -    373494 GTG---AT
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19808413 5 +  19899266 GTG---AT
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               6376 5 -     15069 GTG---AT
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              6506 5 +     14865 GTG---AC
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6849107 5 +  12164890 Gtg---at
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     19264 5 -     30946 nnn---nn
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         4185 5 +     11805 GTG---AT
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           43528 5 +     52369 GTG---AT
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         35915 5 -     44753 GTG---AT
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            17839 5 +     27322 GTG---AT
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       17475 5 -     53241 GTG---AT
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         39739 5 -     48185 GTG---AT
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           35733 2 +     77221 -tg-----
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            4587 5 -     27784 ata---at
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        247196 5 -    344369 GGA---GT
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13246500 5 -  17261082 gta---at
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             604451 5 -   3946241 gta---at
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131534834 5 - 161321710 GTG---AT
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             30497 5 +     56732 GTG---AT
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6806985 5 +   6970761 GTG---AT
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             6376 5 +     18040 GTG---AT
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                16303 5 +     68503 GTA---AT
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1788327 5 +   2252614 ata---at
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 I 2
s Rhinopithecus_bieti.k119_554384                             786 5 -     17045 GTG---AT
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206378263 5 - 206558726 GTG---AT
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44857177 5 -  45163003 GTG---AT
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                19829 5 +    109198 GTA---AT
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       8456 5 +     12214 GTG---AT
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15673343 5 -  43202129 GAG---CT
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        5256 5 +     34089 GAG---CT
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              5198 5 -     60842 GAG---CT
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              5291 5 +     67014 GAG---CT
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              5269 5 +     60816 GAG---CT
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 5206 5 -     76454 GAG---CT
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17341931 5 -  30362882 GAG---CT
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         21292 5 -     62485 GAG---CT
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   32786 5 -    114521 GTA---AT
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        3989 5 +     15331 GTG---AT
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       9382 5 +     20762 GTG---AT
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         119385 5 +    130994 GTG---AT
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           38171 5 +     46263 GTG---AT
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     31291 5 +     42640 GTG---AT
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        14331 5 +     30600 GTG---AT
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  100793 2 -    120886 -CA-----
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            19392 5 +    739146 TCA---AT
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17766530 5 -  27805282 Ata---gt
i Sorex_araneus.JH798170.1                              C 0 I 435
s Spermophilus_dauricus.KZ294190.1                        2240279 5 +   2842873 GTG---AT
i Spermophilus_dauricus.KZ294190.1                      I 2 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             235314 5 -    276980 GCA---AT
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            28092 3 +     62062 GTA-----
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189272613 5 + 218635234 ata---at
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        15521 5 -  13920577 GTG---AC
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                 767 5 +     20549 GTA---AT
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               15204 5 +     45698 GTG---AT
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      807634 4 +   1148477 GG----AT
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  58345 4 +     99546 GG----AT
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               27003 5 +     42269 GTG---AT
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               60319 5 +     65473 GTG---AT
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194008385 5 - 194193292 GTG---AT
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             39220 5 -     47444 GTA---AT
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         I 2 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  6024 4 +      6782 -TG---AT
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  136584 5 -    259118 ATA---AT
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        27487 5 +     38948 GTG---AT
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   21219 5 -     32910 GTG---AT
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      2605 5 -     12939 GTG---AT
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       2541 5 -     14244 GTG---AT
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           43940 5 -     54611 GTG---AT
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        1743 5 -     11566 GTG---AT
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     3920 5 -     15592 GTG---AT
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          2576 5 +     14371 GTG---AT
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                    857 5 +     12481 GTG---AT
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                         733 5 -     24393 GTG---AT
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       5979 5 -     28054 GTG---AT
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44660779 5 -  44834318 GTG---AT
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       3087 5 +     13828 GTG---AT
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   5666 5 +     90398 GTA---AG
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16085842 5 +  31416278 GTG---AT
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2793426 5 -   3938065 gcc---at
i Tupaia_chinensis.KB320831.1                           C 0 I 2
s Tupaia_tana.TupTan_flattened_line_68454                    5626 5 +     13056 GCC---AT
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69313931 5 -  96451834 gta---at
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   1833 5 +     10241 GTG---AT
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6515324 5 +  28682327 GGA---GT
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  5804 5 -     20643 GTG---AT
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             25345 5 -     33872 GTG---AT
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1525178 5 -   2331223 gca---at
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                138814 5 -    281493 GTA---AT
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       127393 5 -    134049 GTG---AT
i Xerus_inauris.XerIna_scaffold_7898                    I 2 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        214797 2 -    227762 GG------
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     16017 3 -     20485 att-----
i Zapus_hudsonius.ZapHud_scaffold_64392                 I 19 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           7430 5 -      8775 GTA---AT
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                701732 90 +    802869 I
e Perognathus_longimembris.PerPac_flattened_line_19359        338 0 +     49596 C
e Procavia_capensis.ProCapCap_scaffold_149274                2467 1156 -      9567 I
e Odocoileus_virginianus.KZ101650.1                       1080205 0 +   1425656 C
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Megaderma_lyra.MegLyr_scaffold_3562                       64783 239 -    234502 I
e Heterohyrax_brucei.HetBruBak_scaffold_25354               61360 1157 +     73687 I
e Crocidura_indochinensis.CroInd_scaffold_848148              199 0 +      1327 C
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1008 325 -      5782 I
e Hylobates_klossii.k141_285563                               343 193 +      1026 I
e Microtus_ochrogaster.CM001673.1                        22820341 4 -  98408828 I
e Rattus_norvegicus.chr11                                13915860 1475 +  90463843 I
e Ondatra_zibethicus.OndZib_scaffold_6821                  125594 4 +    145789 I
e Nannospalax_galili.KL201303.1                            119159 6 +    362372 I
e Graphiurus_murinus.GraMur_scaffold_4493                   77863 0 +    118900 C
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I
e Ellobius_talpinus.LOJH01090055.1                           7151 4 -      7838 I
e Ellobius_lutescens.LOEQ01003611.1                        240029 1 -    369425 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               12366 4 +    209709 A--TT-T
s Acinonyx_jubatus.LLWD01000356.1                         2034500 4 +   3721120 A--CC-G
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    113074 2 -    189883 ----t-a
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10657836 4 +  23371972 A--TC-T
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7095184 4 -  16596857 A--TG-T
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   17415 2 -     22067 ----T-A
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   1881 4 -     60446 A--TT-T
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         2601 4 -     29318 A--TT-T
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         1536 4 +     38766 A--TT-T
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          2495 4 -     80423 A--TT-T
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            10798 4 -     18050 A--TT-T
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_1710068                                513 4 +      1555 A--TT-T
i Alouatta_caraya.k141_1710068                          C 0 C 0
s Alouatta_discolor.k141_811576                             11471 4 -     21359 A--TT-T
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                1092 4 +      2129 A--TT-T
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_2177643                           476 4 -      1868 A--TT-T
i Alouatta_macconnelli.k141_2177643                     C 0 C 0
s Alouatta_nigerrima.k141_3537692                             525 4 +      1660 A--TT-T
i Alouatta_nigerrima.k141_3537692                       C 0 C 0
s Alouatta_palliata.k141_2764429                              440 4 -      1480 A--TT-T
i Alouatta_palliata.k141_2764429                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            4518 4 -      4927 A--TT-T
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_1531728                             655 4 -      1692 A--TT-T
i Alouatta_seniculus.k141_1531728                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3520635 4 +   4113121 A--tt-t
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      391041 4 -    631301 A--TT-T
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            31217 4 +     33004 A--TT-T
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 63150 4 +     78111 A--TT-T
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            6092 4 +     22701 A--TT-T
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5750049 4 +   9889416 A--TT-T
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             6638 4 -    104377 A--TT-T
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               6640 4 +     23246 A--TT-T
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     4190 4 +      5067 A--TA-T
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        1547 4 +      9265 A--TT-T
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 9462 4 -     29036 A--TT-T
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9539909 4 +  39197703 A--GT-T
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             61180 4 +     85812 A--GT-T
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                12193 4 +     89302 A--GT-T
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             16696 4 -     58268 A--GT-T
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             64688 4 +    119057 A--GT-T
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               6659 4 -     25888 A--GT-T
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 7275 4 -     16375 A--TT-T
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                                893 4 +      6337 A--TT-T
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26380709 4 +  51448160 a--tt-t
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        5881 4 -     13118 a--tt-t
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   43745 4 -     72089 A--TT-T
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6560365 4 +   6870073 a--tt-t
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138140476 4 - 161108492 a--tt-t
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     573017 4 -    998990 a--tt-t
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136296209 4 - 158972876 a--tt-t
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1233289 4 -   1914593 a--tt-t
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               114546 4 -    171031 A--TT-T
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 13575 4 +    125063 A--TT-T
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                15618 4 -    216513 A--TT-T
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        8161 4 -    134917 A--TT-T
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3220078 4 -   8989139 a--tt-t
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           397779 4 -  15254737 a--tt-t
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2973515 4 +   6889770 a--tt-t
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11519981 4 +  39901454 A--TC-T
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   15006 4 +     87036 A--TC-T
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11266648 4 -  35597290 A--TC-T
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11089182 4 +  39895921 A--TC-T
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16456197 4 -  44759192 A--TC-T
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21325710 4 + 157394656 A--tt-t
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135706938 4 - 157403528 A--tt-t
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          309555 4 +    345090 A--TT-T
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               60241 4 +     67245 A--TT-T
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   31630 4 +     33760 A--TT-T
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   159398 4 -    276539 A--TT-T
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15787163 3 -  24422027 T--T--T
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15799099 3 -  24440124 T--T--T
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       177290 3 +    436027 T--T--T
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18891391 4 -  29618158 A--TT-T
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 8935 4 -     26817 A--TT-T
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                13178 4 +     25043 A--TT-T
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         8579 4 +     21754 A--TT-T
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4364396 4 +   7569818 a--tt-t
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         4153 4 -      9338 A--TT-T
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6555827 4 +   6739814 A--TT-T
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      27304 4 +     60454 A--TT-T
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          2510 4 -     21101 A--TT-T
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         59819 4 -    107033 A--TT-T
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        2709 4 -     17608 A--TT-T
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          30205 4 +     30494 A--TT-T
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          59050 4 -     59240 A--TT-T
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          2751 4 +     16677 A--CT-T
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           24910 4 +     35983 A--TT-T
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11991436 4 +  12117833 A--TT-T
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46478196 4 +  46592721 A--TT-T
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      41746 4 -     45581 A--TT-T
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       2752 4 +     35577 A--TT-T
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        2527 4 -     25661 A--TT-T
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        2505 4 -     17744 A--TT-T
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        22122 4 +     37128 A--TT-T
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           3289 4 -      6963 A--TT-T
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           59555 4 -     68416 A--TT-T
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            8600 4 +     13308 A--TT-T
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             6203 4 -     18223 A--TT-T
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             23221 4 +     25473 A--TT-T
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           42261 4 +     57117 A--TT-T
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          46940 4 +     54541 A--TT-T
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15962250 3 +  43084221 A--T--T
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         71747 4 +    196370 A--TT-T
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          15927 4 +     40510 A--TT-T
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15140115 4 -  15256731 A--TT-T
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      34730 4 -     53260 A--TT-T
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101145283 4 + 101219884 A--TT-T
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                16977 4 -     21363 A--CT-T
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           762280 4 +    964067 A--CT-T
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10887047 4 +  10971483 A--TT-T
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147665212 4 + 156195979 A--TT-T
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            17197 4 +     23629 A--TT-T
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60614109 4 +  78930452 a--tt-t
i Condylura_cristata.JH655880.1                         C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 279051 2 -    399297 ----T-T
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53029733 2 +  72327488 ----T-T
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            52536 4 -     70449 A--CC-A
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  208939 4 -    956709 G--TT-T
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 31595 3 -     67205 g--t--t
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                18291 3 +     26546 A--G--T
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             59383 3 -    236241 A--T--T
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          184156 4 -   6883506 A--TT-T
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16845422 4 +  31942871 A--TT-T
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80037333 4 -  96802777 a--tt-t
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18699520 4 -  18957592 a--tt-t
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 323049 4 +    993696 a--tt-t
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   3700 4 +    151128 A--TT-T
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   157518 3 +    228994 A--T--T
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3656846 4 +   4240102 a--tt-t
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 28489 4 +     28912 A--TT-T
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                36607 3 -     73477 A--C--T
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22999438 4 -  44670279 G--AA-T
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 12768 4 +     24177 a--tt-t
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1491981 4 +   1727528 a--tt-t
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7816956 4 +  15467074 G--AT-T
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85872710 4 +  99434291 A--TC-T
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4705088 4 +   6522550 A--TT-T
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5853497 4 -   7175178 a--tt-t
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13352002 4 +  41866177 a--tt-t
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          13491 4 +     92910 a--tt-t
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11534781 4 +  16010500 a--tt-t
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48776165 4 -  48907691 A--TT-T
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          315549 4 +    330699 A--TT-T
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             62002 4 +     89355 A--TT-T
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              5597 4 +     13586 A--TT-T
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               5528 4 -      6809 A--TT-T
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            12005 4 +     36558 A--TT-T
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             8326 4 +     60246 A--TT-T
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                11802 4 +    109717 A--TT-T
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               16188 4 +     16540 A--TT-T
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                16463 4 +     27497 A--TT-T
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           18920 4 +     26808 A--TT-T
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                33658 4 +     46535 A--TT-T
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              16382 4 -     29447 A--TT-T
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129893455 4 - 159252932 A--CC-G
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129280547 4 - 158578461 A--CC-G
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 21687 4 +     52776 A--CC-G
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Galago_moholi.ctg555                                     211449 4 -    847004 A--TT-T
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           13823 4 -     43889 A--TT-T
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          10891 4 +     27357 A--TT-T
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               156818 4 +    324696 A--TT-T
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    181780 4 -    189561 A--TT-c
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           14274 4 -     18683 A--TT-T
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               5884 4 -     14630 A--TT-T
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119652984 4 - 195582420 A--TT-T
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         2374 4 +     10286 A--TT-T
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                              851 4 -     11661 A--TT-T
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             6180 4 +     56096 A--TT-T
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        29431 4 -     42470 A--TT-T
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        46054 4 -     54384 A--TT-T
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                27995 4 -     91191 A--TT-T
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2551614 3 +  31725842 a--t--t
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              147641 4 +    277961 A--TT-T
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      278912 4 -    477199 a--tt-t
i Hipposideros_armiger.JXIK01001085.1                   I 2 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              8058 4 -      9143 A--TT-T
i Hipposideros_galeritus.HipGal_scaffold_104691         I 2 C 0
s Hoolock_leuconedys.ctg79                                      5571 4 -   7690867 A--GT-T
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 17811 4 -     67322 A--CA-A
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19514 3 -    119109 A--T--T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_164775                               375 4 -      2073 A--GT-T
i Hylobates_abbotti.k141_164775                         C 0 C 0
s Hylobates_agilis.k141_1878600                               612 4 -      1230 A--GT-T
i Hylobates_agilis.k141_1878600                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14625265 4 -  25970782 A--GT-T
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            2521 4 -      2977 A--GT-T
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             34424 4 -     60944 A--GT-T
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     6684 3 +     22540 A--T--T
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7126368 5 +  13083262 a--tttt
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_5141390                                    908 4 -      3181 A--TT-T
i Indri_indri.k141_5141390                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               9538 4 +     17520 A--TT-T
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8566428 2 +  11848649 ----t-t
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               24148 4 +     37189 A--TT-T
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          50778 4 -    147782 A--TT-T
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                     845 4 +     26176 A--TT-T
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258407735 4 - 285822530 A--TT-T
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        24493 4 +     39228 A--TT-T
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            53877 4 +     63517 A--TT-T
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        79141 4 +    116806 A--TT-T
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     32132 4 -     33031 A--TT-T
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3086499 4 -   3498232 a--tt-t
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    13785 4 +     22452 A--TT-T
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            136495 4 +   3060487 a--tt-t
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19248921 4 +  19376315 A--TT-T
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           11198 4 +     84689 A--TT-T
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3778947 4 +   6799190 A--TT-T
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20595326 4 -  62548349 G--GT-T
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11088638 4 +  39895028 A--TC-T
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             20656 4 +     74745 A--TT-T
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12707113 4 +  12821369 A--TT-T
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                2755 4 -      3136 A--TT-T
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           47570 4 +     63263 A--TT-T
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                 2278 4 -      2568 A--TT-T
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 2863 4 -      7381 A--TT-T
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  46080 4 -     79256 A--TT-T
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196036187 4 + 196197964 A--TT-T
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11446357 4 +  11645122 A--TT-T
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   5027 4 -     46448 A--TT-T
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                2701 4 -     13212 A--TT-T
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 16380 4 -     55006 A--TT-T
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43841496 4 +  43892939 A--TT-T
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               17666 4 -     24607 A--TT-T
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               5032 4 -     27140 A--TT-T
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43438081 4 -  43563597 A--TT-T
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4450901 4 -   4543643 A--TT-T
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            146582 4 +    252755 A--TT-T
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             36725 4 +     58827 A--TT-T
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36874188 4 +  64221397 A--TT-T
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             1522 4 -     87323 A--TC-T
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               13452 2 +     15977 ----T-T
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1047419 2 -  26018355 ----T-T
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_227248                    822 4 -      1377 A--TT-T
i Mesoplodon_bidens.MesBid_scaffold_227248              C 0 C 0
s Microcebus_murinus.CM007691.1                          16510767 4 +  47401472 a--tt-t
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  35438 4 -     48017 G--AC-T
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               23432 4 -     32043 A--TT-T
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8210590 4 +  10048721 a--tt-t
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            35079 4 +     45743 A--TT-T
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         2630 4 +     29742 A--TT-T
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        12015 4 -    104932 A--TT-T
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     6154 4 +      8497 A--TT-T
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 146923 4 +    154973 A--TT-T
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                161952 4 +    265003 A--TT-T
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  2011 4 -     19904 A--TT-T
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          20053 4 -    100666 A--TT-T
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70767053 2 +  92629107 ----T-T
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75490113 2 +  98207768 ----T-T
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67556351 2 +  89017189 ----t-t
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74331288 2 +  97876770 ----T-T
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             12556 4 +     98495 G--AT-C
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4424891 4 -  28371801 A--TC-T
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     90634 3 -    117718 A--C--T
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               968582 4 +   8389877 A--TT-T
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5020257 4 +   6462685 A--TT-T
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3466166 4 -   3747815 A--TT-T
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        11376 4 +     66751 A--TT-T
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             5543 4 -      8794 A--TT-T
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nasalis_larvatus.k141_153429                               9137 4 +     48152 A--TT-T
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4485405 4 -  14209539 a--tt-t
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3951535 4 -   4490290 a--tt-t
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Nomascus_annamensis.k141_720788                             519 4 -      1065 A--GT-T
i Nomascus_annamensis.k141_720788                       C 0 C 0
s Nomascus_concolor.k141_581629                                82 4 -      6578 A--GT-T
i Nomascus_concolor.k141_581629                         C 0 C 0
s Nomascus_gabriellae.k141_1004198                            390 4 +      1448 A--GT-T
i Nomascus_gabriellae.k141_1004198                      C 0 C 0
s Nomascus_siki_b.tarseq_80                             25541 4 -  18771707 A--GT-T
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  3244 4 +      4512 A--GT-T
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                31439 4 +   3668941 A--TC-T
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65567642 4 -  95554990 A--TT-T
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            4368 4 +      6470 A--TT-T
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65669977 4 +  89412551 A--TT-T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4996532 4 -  23139505 A--TC-T
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3686417 3 +  10294119 A--T--T
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             680072 4 -   3126709 A--TC-T
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         37508 4 +     78940 a--tt-t
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  37610 2 +     62360 ----T-T
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7225220 4 -   7562323 A--TT-T
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              58550 4 -     66828 G--GT-T
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141876819 4 + 163896628 A--TT-T
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      308723 4 -    505867 A--TC-T
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        1267 4 -     53940 A--TT-T
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18009247 4 -  38779656 A--TT-T
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134077786 4 - 275406953 A--tt-t
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      79001 4 +    140051 A--TT-T
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127575250 4 - 205426864 A--TT-T
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120152404 4 - 196562556 A--TT-T
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  34825 4 +    295523 A--CC-G
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3638559 4 +  18214204 A--CC-G
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5028234 4 -   6340057 A--CC-G
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1066636 4 -   1292953 A--TT-T
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188156868 4 - 188283584 A--TT-T
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             5185 4 +      5367 A--TT-T
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47514253 4 +  47705337 A--TT-T
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 68229 4 -    104429 A--TT-T
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    6765 4 +     14967 A--TT-T
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 2624 4 -      7628 A--TT-T
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    116316 4 -    135482 A--AC-A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           5956 4 -     23713 A--TT-T
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            25269 4 -     27972 A--TT-T
i Perodicticus_potto.k141_713187                        C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4950857 2 -   8017169 ----T-T
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    13999 3 -     36578 A--T--T
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            121825 4 -    122454 A--TT-T
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1987485                           2651 4 -      5908 A--TT-T
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       3275 4 -     17985 A--TT-T
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            2642 4 +      7694 A--TT-T
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26741120 4 +  26888534 A--TT-T
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            98433 4 +    112873 A--TT-T
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             44384 4 -     61926 A--TT-T
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        25769 4 +     78826 A--TT-T
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              9816 4 -     15800 A--TT-T
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        13015 4 -     16101 A--TT-T
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          6243 4 +      9673 A--TT-T
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13475243 4 -  19735023 A--TT-T
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           14146 4 -     31692 A--TT-T
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           5911 4 +     21690 A--TT-T
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       23486 4 +     44506 A--TT-T
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        23698 4 +     67491 A--TT-T
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      13938 4 -     98129 A--TT-T
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     23538 4 +    147771 A--TT-T
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                          174 4 -     43940 A--TT-T
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          4257 4 -     55515 A--TT-T
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         23611 4 +    152463 A--TT-T
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       1328 4 -    119457 A--TT-T
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         13334 4 +    134592 A--TT-T
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          23921 4 -     75465 A--TT-T
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              187770 4 -    373494 A--TT-T
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19808418 4 +  19899266 A--TT-T
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               6381 4 -     15069 A--TT-T
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              6511 4 +     14865 A--TT-T
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6849112 4 +  12164890 a--tt-t
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     19269 4 -     30946 n--nn-n
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         4190 4 +     11805 A--TT-T
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           43533 4 +     52369 A--TT-T
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         35920 4 -     44753 A--TT-T
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            17844 4 +     27322 A--TT-T
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       17480 4 -     53241 A--TT-T
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         39744 4 -     48185 A--TT-T
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           35735 2 +     77221 ----t-t
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            4592 4 -     27784 a--tt-t
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        247201 4 -    344369 A--TC-T
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13246505 4 -  17261082 a--tt-t
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             604456 4 -   3946241 a--tt-t
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131534839 4 - 161321710 A--CC-A
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             30502 4 +     56732 A--TT-T
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6806990 4 +   6970761 A--TT-T
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             6381 4 +     18040 A--TT-T
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                16308 4 +     68503 A--TT-T
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1788334 4 +   2252614 a--tt-t
i Rhinolophus_sinicus.LVEH01000179.1                    I 2 C 0
s Rhinopithecus_bieti.k119_554384                             791 4 -     17045 A--TT-T
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206378268 4 - 206558726 A--TT-T
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44857182 4 -  45163003 A--TT-T
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                19834 4 +    109198 A--TT-T
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       8461 4 +     12214 A--TT-T
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15673348 2 -  43202129 A--T---
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        5261 2 +     34089 A--T---
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              5203 2 -     60842 A--T---
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              5296 2 +     67014 A--T---
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              5274 2 +     60816 A--T---
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 5211 2 -     76454 A--T---
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17341936 4 -  30362882 A--TT-T
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         21297 4 -     62485 A--TT-T
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   32791 4 -    114521 A--TT-T
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        3994 4 +     15331 A--TT-T
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       9387 4 +     20762 A--TT-T
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         119390 4 +    130994 A--TT-T
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           38176 4 +     46263 A--TT-T
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     31296 4 +     42640 A--TT-T
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        14336 4 +     30600 A--TT-T
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  100795 2 -    120886 ----T-T
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            19397 4 +    739146 A--AT-A
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17766970 6 -  27805282 AGTTC-T
i Sorex_araneus.JH798170.1                              I 435 C 0
s Spermophilus_dauricus.KZ294190.1                        2240284 5 +   2842873 A--TTTT
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             235319 4 -    276980 A--TC-T
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Sus_scrofa.CM000824.4                                 189272618 4 + 218635234 a--tt-t
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        15526 4 -  13920577 A--GT-C
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                 772 4 +     20549 A--TT-T
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               15209 4 +     45698 A--TT-T
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      807638 4 +   1148477 A--TT-T
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  58349 4 +     99546 A--TT-T
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               27008 4 +     42269 A--TT-T
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               60324 4 +     65473 A--TT-T
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194008390 4 - 194193292 A--TT-T
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             39225 3 -     47444 A--T--T
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  6028 4 +      6782 A--TT-T
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  136589 4 -    259118 A--TT-T
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        27492 4 +     38948 A--TT-T
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   21224 4 -     32910 A--TT-T
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      2610 4 -     12939 A--TT-T
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       2546 4 -     14244 A--TT-T
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           43945 4 -     54611 A--TT-T
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        1748 4 -     11566 A--TT-T
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     3925 4 -     15592 A--TT-T
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          2581 4 +     14371 A--TT-T
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                    862 4 +     12481 A--TT-T
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                         738 4 -     24393 A--TT-T
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       5984 4 -     28054 A--TT-T
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44660784 4 -  44834318 A--TT-T
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       3092 4 +     13828 A--TT-T
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   5671 4 +     90398 A--TT-T
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16085847 4 +  31416278 G--GT-T
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2793433 4 -   3938065 a--tt-t
i Tupaia_chinensis.KB320831.1                           I 2 I 197
s Tupaia_tana.TupTan_flattened_line_68454                    5631 4 +     13056 G--TT-T
i Tupaia_tana.TupTan_flattened_line_68454               C 0 I 185
s Tursiops_truncatus.MRVK01000923.1                      69313936 4 -  96451834 a--tt-t
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   1838 4 +     10241 A--TT-T
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6515329 4 +  28682327 A--TC-T
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  5809 4 -     20643 A--TT-T
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             25350 4 -     33872 A--TT-T
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1525183 4 -   2331223 a--tt-t
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                138819 4 -    281493 A--TC-T
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       127398 4 -    134049 A--TT-T
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        214799 4 -    227762 A--TC-T
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     16020 2 -     20485 ----t-t
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           7435 4 -      8775 A--TT-T
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                701732 90 +    802869 I
e Perognathus_longimembris.PerPac_flattened_line_19359        338 0 +     49596 C
e Suricata_suricatta.SurSur_flattened_line_20339            28095 0 +     62062 C
e Procavia_capensis.ProCapCap_scaffold_149274                2467 1156 -      9567 I
e Odocoileus_virginianus.KZ101650.1                       1080205 0 +   1425656 C
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Mungos_mungo.MunMun_flattened_line_8729                  145435 0 -    168139 C
e Megaderma_lyra.MegLyr_scaffold_3562                       64783 239 -    234502 I
e Heterohyrax_brucei.HetBruBak_scaffold_25354               61360 1157 +     73687 I
e Helogale_parvula.HelPar_flattened_line_22962              17740 0 +     53719 C
e Crocidura_indochinensis.CroInd_scaffold_848148              199 0 +      1327 C
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1008 325 -      5782 I
e Hylobates_klossii.k141_285563                               343 193 +      1026 I
e Microtus_ochrogaster.CM001673.1                        22820341 4 -  98408828 I
e Rattus_norvegicus.chr11                                13915860 1475 +  90463843 I
e Ondatra_zibethicus.OndZib_scaffold_6821                  125594 4 +    145789 I
e Nannospalax_galili.KL201303.1                            119159 6 +    362372 I
e Graphiurus_murinus.GraMur_scaffold_4493                   77863 0 +    118900 C
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I
e Ellobius_talpinus.LOJH01090055.1                           7151 4 -      7838 I
e Ellobius_lutescens.LOEQ01003611.1                        240029 1 -    369425 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               12370 5 +    209709 CAATA
s Acinonyx_jubatus.LLWD01000356.1                         2034504 4 +   3721120 TAT-G
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    113076 4 -    189883 tgt-g
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10657840 4 +  23371972 GAA-G
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7095188 4 -  16596857 TAA-G
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   17417 4 -     22067 AAA-A
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   1885 5 -     60446 CAACA
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         2605 5 -     29318 CAACA
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         1540 5 +     38766 CAACA
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          2499 5 -     80423 CAACA
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            10802 5 -     18050 CAGTA
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_1710068                                517 5 +      1555 CAGTA
i Alouatta_caraya.k141_1710068                          C 0 C 0
s Alouatta_discolor.k141_811576                             11475 5 -     21359 CAGTA
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                1096 5 +      2129 CAGTA
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_2177643                           480 5 -      1868 CAGTA
i Alouatta_macconnelli.k141_2177643                     C 0 C 0
s Alouatta_nigerrima.k141_3537692                             529 5 +      1660 CAGTA
i Alouatta_nigerrima.k141_3537692                       C 0 C 0
s Alouatta_palliata.k141_2764429                              444 5 -      1480 CAGTA
i Alouatta_palliata.k141_2764429                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            4522 5 -      4927 CAGTA
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_1531728                             659 5 -      1692 CAGTA
i Alouatta_seniculus.k141_1531728                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3520639 4 +   4113121 caa-g
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      391045 4 -    631301 TAA-G
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            31221 4 +     33004 TAA-G
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 63154 5 +     78111 CAATA
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            6096 5 +     22701 CAATA
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5750053 5 +   9889416 CAATA
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             6642 5 -    104377 CAACA
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               6644 5 +     23246 CAACA
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     4194 4 +      5067 TAA-G
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        1551 4 +      9265 TAA-G
i Arctocebus_calabarensis.k141_587554                   C 0 I 157
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 9466 4 -     29036 TAA-G
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9539913 5 +  39197703 CAGTA
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             61184 5 +     85812 CAGTA
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                12197 5 +     89302 CAGTA
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             16700 5 -     58268 CAGTA
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             64692 5 +    119057 CAGTA
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               6663 5 -     25888 CAGTA
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 7279 4 -     16375 TAA-G
i Avahi_laniger.k141_2840928                            C 0 I 158
s Avahi_peyrierasi.k141_798820                                897 4 +      6337 TAA-G
i Avahi_peyrierasi.k141_798820                          C 0 I 158
s Balaenoptera_acutorostrata.KI537095.1                  26380713 4 +  51448160 taa-g
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        5885 4 -     13118 taa-g
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   43749 4 -     72089 TAA-G
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6560369 4 +   6870073 taa-g
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138140480 4 - 161108492 taa-g
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     573021 4 -    998990 taa-g
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136296213 4 - 158972876 taa-g
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1233293 4 -   1914593 taa-g
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               114550 5 -    171031 CAATA
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 13579 5 +    125063 CAATA
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                15622 5 -    216513 CAATA
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        8165 5 -    134917 CAATA
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3220082 4 -   8989139 taa-g
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           397783 4 -  15254737 taa-g
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2973519 4 +   6889770 taa-g
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11519985 4 +  39901454 TAA-G
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   15010 4 +     87036 TAA-G
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11266652 4 -  35597290 TAA-G
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11089186 4 +  39895921 TAA-G
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16456201 4 -  44759192 TAA-G
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21325714 4 + 157394656 caa-g
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135706942 4 - 157403528 caa-g
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          309559 5 +    345090 TACTA
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               60245 4 +     67245 TAA-G
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   31634 4 +     33760 CAA-G
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   159402 4 -    276539 TAA-G
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15787166 4 -  24422027 TAA-G
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15799102 4 -  24440124 TAA-G
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       177293 4 +    436027 TAA-G
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18891395 5 -  29618158 CAATA
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 8939 5 -     26817 CAATA
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                13182 5 +     25043 CAATA
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         8583 5 +     21754 TACTA
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4364400 4 +   7569818 taa-g
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         4157 4 -      9338 TAA-G
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6555831 5 +   6739814 CAATA
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      27308 5 +     60454 CAATA
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          2514 5 -     21101 CAATA
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         59823 5 -    107033 CAATA
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        2713 5 -     17608 CAATA
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          30209 5 +     30494 CAATA
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          59054 5 -     59240 CAATA
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          2755 5 +     16677 CAATA
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           24914 5 +     35983 CAATA
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11991440 5 +  12117833 CAATA
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46478200 5 +  46592721 CAATA
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      41750 5 -     45581 CAATA
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       2756 5 +     35577 CAATA
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        2531 5 -     25661 CAATA
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        2509 5 -     17744 CAATA
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        22126 5 +     37128 CAATA
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           3293 4 -      6963 TAA-T
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           59559 4 -     68416 TAA-G
i Cheirogaleus_major.k141_1157592                       C 0 I 158
s Cheirogaleus_medius.k141_133808                            8604 4 +     13308 TAA-G
i Cheirogaleus_medius.k141_133808                       C 0 I 157
s Cheracebus_lucifer.k141_619653                             6207 5 -     18223 CAATA
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             23225 5 +     25473 CAATA
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           42265 5 +     57117 CAATA
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          46944 5 +     54541 CAATA
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15962253 4 +  43084221 TAA-G
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         71751 5 +    196370 CAATA
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          15931 5 +     40510 CAATA
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15140119 5 -  15256731 CAACA
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      34734 5 -     53260 CAACA
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101145287 5 + 101219884 CAATA
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                16981 4 -     21363 TAA-T
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           762284 4 +    964067 TAA-T
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10887051 5 +  10971483 CAATA
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147665216 5 + 156195979 CAATA
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            17201 5 +     23629 CAATA
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60614113 4 +  78930452 taa-g
i Condylura_cristata.JH655880.1                         C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 279053 4 -    399297 TAA-G
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53029735 4 +  72327488 GTG-T
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            52540 4 -     70449 TAA-G
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  208943 4 -    956709 TAA-A
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 31598 4 -     67205 TGT-A
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                18294 4 +     26546 TAA-G
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             59386 4 -    236241 TAA-G
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          184160 4 -   6883506 TAA-T
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16845426 4 +  31942871 TAA-G
i Daubentonia_madagascariensis.ctg11                    C 0 I 160
s Delphinapterus_leucas.KZ290064.1                       80037337 4 -  96802777 taa-g
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18699524 4 -  18957592 taa-g
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 323053 4 +    993696 taa-g
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   3704 4 +    151128 TAA-G
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   157521 4 +    228994 TAA-G
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3656850 4 +   4240102 tat-a
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 28493 4 +     28912 TAT-A
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                36610 4 -     73477 TAA-G
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22999442 4 -  44670279 TAA-G
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 12772 4 +     24177 taa-g
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1491985 4 +   1727528 taa-g
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7816960 4 +  15467074 TAG-G
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85872714 4 +  99434291 TAA-G
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4705092 4 +   6522550 TAA-G
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5853501 4 -   7175178 taa-g
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13352006 4 +  41866177 taa-g
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          13495 4 +     92910 taa-g
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11534785 4 +  16010500 taa-g
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48776169 5 -  48907691 CAACA
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          315553 4 +    330699 TAA-G
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             62006 4 +     89355 TAA-G
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              5601 4 +     13586 TAA-G
i Eulemur_albifrons.k141_715837                         C 0 I 161
s Eulemur_collaris.k141_311830                               5532 4 -      6809 TAA-G
i Eulemur_collaris.k141_311830                          C 0 I 160
s Eulemur_coronatus.k141_3240342                            12009 4 +     36558 TAA-G
i Eulemur_coronatus.k141_3240342                        C 0 I 160
s Eulemur_flavifrons.k141_903901                             8330 4 +     60246 TAA-G
i Eulemur_flavifrons.k141_903901                        C 0 I 160
s Eulemur_fulvus.k141_653297                                11806 4 +    109717 TAA-G
i Eulemur_fulvus.k141_653297                            C 0 I 161
s Eulemur_macaco.k141_1341545                               16192 4 +     16540 TAA-G
i Eulemur_macaco.k141_1341545                           C 0 I 160
s Eulemur_mongoz.k141_825972                                16467 4 +     27497 TAA-G
i Eulemur_mongoz.k141_825972                            C 0 I 161
s Eulemur_rubriventer.k141_411740                           18924 4 +     26808 TAA-G
i Eulemur_rubriventer.k141_411740                       C 0 I 160
s Eulemur_rufus.k141_1620292                                33662 4 +     46535 TAA-G
i Eulemur_rufus.k141_1620292                            C 0 I 161
s Eulemur_sanfordi.k141_186399                              16386 4 -     29447 TAA-G
i Eulemur_sanfordi.k141_186399                          C 0 I 161
s Felis_catus.CM001386.2                                129893459 4 - 159252932 TAG-G
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129280551 4 - 158578461 TAT-G
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 21691 4 +     52776 TAT-G
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Galago_moholi.ctg555                                     211453 4 -    847004 TAA-G
i Galago_moholi.ctg555                                  C 0 I 162
s Galago_senegalensis.k141_964197                           13827 4 -     43889 TAA-G
i Galago_senegalensis.k141_964197                       C 0 I 162
s Galagoides_demidoff.k141_1769638                          10895 4 +     27357 TAA-G
i Galagoides_demidoff.k141_1769638                      C 0 I 160
s Galeopterus_variegatus.GalVar_scaffold_354               156822 4 +    324696 TAA-G
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    181784 4 -    189561 taa-g
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           14278 4 -     18683 TAA-G
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               5888 5 -     14630 CAATA
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119652988 5 - 195582420 CAATA
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         2378 4 +     10286 TAA-G
i Hapalemur_alaotrensis.k141_1280836                    C 0 I 160
s Hapalemur_gilberti.k141_279011                              855 4 -     11661 TAA-G
i Hapalemur_gilberti.k141_279011                        C 0 I 160
s Hapalemur_griseus.k141_1387522                             6184 4 +     56096 TAA-G
i Hapalemur_griseus.k141_1387522                        C 0 I 160
s Hapalemur_meridionalis.k141_186231                        29435 4 -     42470 TAA-G
i Hapalemur_meridionalis.k141_186231                    C 0 I 160
s Hapalemur_occidentalis.k141_797938                        46058 4 -     54384 TAA-G
i Hapalemur_occidentalis.k141_797938                    C 0 I 160
s Helogale_parvula.HelPar_flattened_line_22962              17740 2 +     53719 --A-G
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                27999 4 -     91191 CAA-A
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2551617 4 +  31725842 taa-a
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              147645 4 +    277961 TAA-G
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      278916 4 -    477199 taa-g
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              8062 4 -      9143 TAA-G
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      5575 5 -   7690867 CAATA
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 17815 4 -     67322 TAA-G
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19517 4 -    119109 TAA-G
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_164775                               379 5 -      2073 CAATA
i Hylobates_abbotti.k141_164775                         C 0 C 0
s Hylobates_agilis.k141_1878600                               616 5 -      1230 CAATA
i Hylobates_agilis.k141_1878600                         C 0 I 7
s Hylobates_pileatus_b.ContigUN                                 14625269 5 -  25970782 CAATA
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            2525 5 -      2977 CAATA
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             34428 5 -     60944 CAATA
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     6687 4 +     22540 TAA-G
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7126373 4 +  13083262 taa-c
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_5141390                                    912 4 -      3181 TAA-G
i Indri_indri.k141_5141390                              C 0 I 158
s Inia_geoffrensis.IniGeo_flattened_line_66725               9542 4 +     17520 TAA-G
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8566430 4 +  11848649 taa-a
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               24152 4 +     37189 TAA-G
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          50782 5 -    147782 TAGTA
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                     849 4 +     26176 TAA-G
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258407739 4 - 285822530 TAA-G
i Lemur_catta.scaffold_1                                C 0 I 160
s Lepilemur_ankaranensis.k141_884009                        24497 4 +     39228 TAA-G
i Lepilemur_ankaranensis.k141_884009                    C 0 I 160
s Lepilemur_dorsalis.k141_134267                            53881 4 +     63517 TAA-G
i Lepilemur_dorsalis.k141_134267                        C 0 I 160
s Lepilemur_ruficaudatus.k141_617879                        79145 4 +    116806 TAA-G
i Lepilemur_ruficaudatus.k141_617879                    C 0 I 160
s Lepilemur_septentrionalis.k141_578524                     32136 4 -     33031 TAA-G
i Lepilemur_septentrionalis.k141_578524                 C 0 I 160
s Leptonychotes_weddellii.KB714749.1                      3086503 4 -   3498232 taa-g
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    13789 4 +     22452 TAA-G
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            136499 4 +   3060487 taa-g
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19248925 5 +  19376315 CAATA
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           11202 4 +     84689 TAA-G
i Loris_lydekkerianus.k141_550999                       C 0 I 156
s Loris_tardigradus.ctg97                                 3778951 4 +   6799190 TAA-G
i Loris_tardigradus.ctg97                               C 0 I 156
s Loxodonta_africana.GL010040.1                          20595330 4 -  62548349 TAA-G
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11088642 4 +  39895028 TAA-G
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             20660 5 +     74745 CAATA
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12707117 5 +  12821369 CAATA
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                2759 5 -      3136 CAATA
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           47574 5 +     63263 CAATA
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                 2282 5 -      2568 CAATA
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 2867 5 -      7381 CAATA
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  46084 5 -     79256 CAATA
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196036191 5 + 196197964 CAATA
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11446361 5 +  11645122 CAATA
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   5031 5 -     46448 CAATA
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                2705 5 -     13212 CAATA
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 16384 5 -     55006 CAATA
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43841500 5 +  43892939 CAATA
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               17670 5 -     24607 CAATA
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               5036 5 -     27140 CAATA
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43438085 5 -  43563597 CAATA
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4450905 5 -   4543643 CAATA
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            146586 4 +    252755 TAA-G
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             36729 4 +     58827 TAA-G
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36874192 4 +  64221397 TAA-G
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             1526 4 -     87323 TAA-G
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               13454 4 +     15977 TAA-G
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1047421 4 -  26018355 CTG-T
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_227248                    826 4 -      1377 TAA-G
i Mesoplodon_bidens.MesBid_scaffold_227248              C 0 C 0
s Microcebus_murinus.CM007691.1                          16510771 4 +  47401472 taa-g
i Microcebus_murinus.CM007691.1                         C 0 I 158
s Microgale_talazaci.MicTal_scaffold_34660                  35442 4 -     48017 TAA-G
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               23436 4 -     32043 TAA-G
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8210594 4 +  10048721 taa-g
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            35083 4 +     45743 TAA-G
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         2634 5 +     29742 CAATA
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        12019 4 -    104932 TAA-G
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     6158 4 +      8497 TAA-G
i Mirza_zaza.k141_226143                                C 0 I 160
s Monodon_monoceros.MonMon_M_scaffold_5598                 146927 4 +    154973 TAA-G
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                161956 4 +    265003 TAA-G
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  2015 4 -     19904 TAA-G
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  145435 2 -    168139 --A-G
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          20057 4 -    100666 TAA-G
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70767055 4 +  92629107 TAA-G
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75490115 4 +  98207768 TAA-G
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67556353 4 +  89017189 taa-a
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74331290 4 +  97876770 TAA-G
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             12560 4 +     98495 TAA-G
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4424895 4 -  28371801 TAA-G
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     90637 4 -    117718 TGT-G
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               968586 4 +   8389877 TAA-G
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5020261 4 +   6462685 TAA-G
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3466170 4 -   3747815 TAA-G
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        11380 4 +     66751 TAA-G
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             5547 4 -      8794 TAA-C
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nasalis_larvatus.k141_153429                               9141 5 +     48152 CAATA
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4485409 4 -  14209539 taa-g
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3951539 4 -   4490290 taa-g
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Nomascus_annamensis.k141_720788                             523 5 -      1065 CAATA
i Nomascus_annamensis.k141_720788                       C 0 C 0
s Nomascus_concolor.k141_581629                                86 5 -      6578 CAATA
i Nomascus_concolor.k141_581629                         C 0 C 0
s Nomascus_gabriellae.k141_1004198                            394 5 +      1448 CAATA
i Nomascus_gabriellae.k141_1004198                      C 0 C 0
s Nomascus_siki_b.tarseq_80                             25545 5 -  18771707 CAATA
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  3248 5 +      4512 CAATA
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                31443 4 +   3668941 TAA-G
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65567646 4 -  95554990 TAA-G
i Nycticebus_bengalensis.LG16                           C 0 I 165
s Nycticebus_coucang.k141_2051882                            4372 4 +      6470 TAA-G
i Nycticebus_coucang.k141_2051882                       C 0 I 165
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65669981 4 +  89412551 TAA-G
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 I 165
s Ochotona_princeps.JH802095.1                            4996536 4 -  23139505 TAA-C
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3686420 4 +  10294119 TGT-A
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             680076 4 -   3126709 TAA-G
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         37512 4 +     78940 taa-g
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  37612 4 +     62360 TAA-T
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7225224 4 -   7562323 TAA-G
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              58554 4 -     66828 TAA-G
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141876823 4 + 163896628 CAA-G
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      308727 4 -    505867 TAA-G
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        1271 4 -     53940 TAA-G
i Otolemur_crassicaudatus.k141_505435                   C 0 I 159
s Otolemur_garnettii.GL873528.1                          18009251 4 -  38779656 TAA-G
i Otolemur_garnettii.GL873528.1                         C 0 I 159
s Ovis_aries.CM001582.2                                 134077790 4 - 275406953 caa-g
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      79005 4 +    140051 CAA-G
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127575254 5 - 205426864 CAATA
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120152408 5 - 196562556 CAATA
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  34829 4 +    295523 TAT-G
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3638563 4 +  18214204 TAT-G
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5028238 4 -   6340057 TAT-G
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1066640 4 -   1292953 CAA-G
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188156872 5 - 188283584 CAATA
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             5189 5 +      5367 CAATA
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47514257 5 +  47705337 CAATA
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 68233 5 -    104429 CAATA
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    6769 5 +     14967 CAATA
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 2628 5 -      7628 CAATA
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    116320 4 -    135482 TAA-T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           5960 4 -     23713 TAA-G
i Perodicticus_ibeanus.k141_117958                      C 0 I 155
s Perodicticus_potto.k141_713187                            25273 4 -     27972 TAA-G
i Perodicticus_potto.k141_713187                        C 0 I 156
s Perognathus_longimembris.PerPac_flattened_line_19359        338 4 +     49596 TAA-G
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4950859 4 -   8017169 TAA-T
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    14002 4 -     36578 TGA-A
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            121829 4 -    122454 TAA-G
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1987485                           2655 5 -      5908 CAATA
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       3279 5 -     17985 CAATA
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            2646 5 +      7694 CAATA
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26741124 5 +  26888534 CAATA
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            98437 4 +    112873 TAA-G
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             44388 5 -     61926 CAATA
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        25773 5 +     78826 CAATA
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              9820 5 -     15800 CAATA
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        13019 5 -     16101 CAATA
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          6247 5 +      9673 CAATA
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13475247 5 -  19735023 CAATA
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           14150 5 -     31692 CAATA
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           5915 4 +     21690 TAA-G
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       23490 5 +     44506 CAATA
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        23702 5 +     67491 CAATA
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      13942 5 -     98129 CAATA
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     23542 5 +    147771 CAATA
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                          178 5 -     43940 CAATA
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          4261 5 -     55515 CAATA
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         23615 5 +    152463 CAATA
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       1332 5 -    119457 CAATA
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         13338 5 +    134592 CAATA
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          23925 5 -     75465 CAATA
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              187774 5 -    373494 CAATA
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19808422 5 +  19899266 CAATA
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               6385 5 -     15069 CAATA
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              6515 5 +     14865 CAATA
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6849116 4 +  12164890 taa-g
i Prolemur_simus.MPIZ01000048.1                         C 0 I 156
s Propithecus_coquerelli.NW_012147863.1                     19273 4 -     30946 nnn-n
i Propithecus_coquerelli.NW_012147863.1                 C 0 I 160
s Propithecus_coronatus.k141_1353159                         4194 4 +     11805 TAA-G
i Propithecus_coronatus.k141_1353159                    C 0 I 158
s Propithecus_diadema.k141_577245                           43537 4 +     52369 TAA-G
i Propithecus_diadema.k141_577245                       C 0 I 158
s Propithecus_edwardsi.k141_1317105                         35924 4 -     44753 TAA-G
i Propithecus_edwardsi.k141_1317105                     C 0 I 158
s Propithecus_perrieri.k141_7554                            17848 4 +     27322 TAA-G
i Propithecus_perrieri.k141_7554                        C 0 I 158
s Propithecus_tattersalli.k141_907138                       17484 4 -     53241 TAA-G
i Propithecus_tattersalli.k141_907138                   C 0 I 155
s Propithecus_verreauxi.k141_158021                         39748 4 -     48185 TAA-G
i Propithecus_verreauxi.k141_158021                     C 0 I 155
s Psammomys_obesus.NESX01026517.1                           35737 4 +     77221 tga-g
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            4596 4 -     27784 taa-g
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        247205 4 -    344369 TAA-G
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13246509 4 -  17261082 taa-g
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             604460 4 -   3946241 taa-g
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131534843 4 - 161321710 TAT-G
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             30506 5 +     56732 CAATA
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6806994 5 +   6970761 CAATA
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             6385 5 +     18040 CAATA
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                16312 4 +     68503 TAA-G
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1788338 4 +   2252614 taa-g
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                             795 5 -     17045 CAATA
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206378272 5 - 206558726 CAATA
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44857186 5 -  45163003 CAATA
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                19838 4 +    109198 TAA-G
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       8465 4 +     12214 TAA-G
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15673350 2 -  43202129 ---TA
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        5263 2 +     34089 ---TA
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              5205 2 -     60842 ---TA
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              5298 2 +     67014 ---TA
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              5276 2 +     60816 ---TA
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 5213 2 -     76454 ---TA
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17341940 5 -  30362882 CAATA
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         21301 5 -     62485 CAATA
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   32795 4 -    114521 TCA-G
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        3998 5 +     15331 CAATA
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       9391 5 +     20762 CAATA
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         119394 5 +    130994 CAATA
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           38180 5 +     46263 CAATA
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     31300 5 +     42640 CAATA
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        14340 5 +     30600 CAATA
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  100797 4 -    120886 TAA-T
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            19401 4 +    739146 TAA-G
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17766976 4 -  27805282 TAA-G
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2240289 4 +   2842873 TAA-C
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             235323 4 -    276980 TAA-G
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            28095 2 +     62062 --A-G
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189272622 4 + 218635234 taa-g
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        15530 5 -  13920577 CAATA
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                 776 4 +     20549 TAA-G
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               15213 4 +     45698 TAA-C
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      807642 4 +   1148477 TAA-G
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  58353 4 +     99546 TAA-G
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               27012 5 +     42269 TACTA
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               60328 5 +     65473 TACTA
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194008394 5 - 194193292 CGATA
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             39228 4 -     47444 TTG-A
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  6032 4 +      6782 TAA-T
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  136593 4 -    259118 TAA-G
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        27496 5 +     38948 CAATA
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   21228 5 -     32910 CAATA
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      2614 5 -     12939 CAATA
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       2550 5 -     14244 CAATA
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           43949 5 -     54611 CAATA
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        1752 5 -     11566 CAATA
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     3929 5 -     15592 CAATA
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          2585 5 +     14371 CAATA
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                    866 5 +     12481 CAATA
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                         742 5 -     24393 CAATA
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       5988 5 -     28054 CAATA
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44660788 5 -  44834318 CAATA
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       3096 5 +     13828 CAATA
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   5675 4 +     90398 TAA-G
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16085851 4 +  31416278 TAA-G
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2793634 4 -   3938065 TAA-A
i Tupaia_chinensis.KB320831.1                           I 197 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    5820 4 +     13056 TAA-G
i Tupaia_tana.TupTan_flattened_line_68454               I 185 C 0
s Tursiops_truncatus.MRVK01000923.1                      69313940 4 -  96451834 taa-g
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   1842 4 +     10241 TAA-A
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6515333 4 +  28682327 GAA-G
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  5813 4 -     20643 TAC-T
i Varecia_rubra.k141_432109                             C 0 I 93
s Varecia_variegata.k141_775891                             25354 4 -     33872 TAC-T
i Varecia_variegata.k141_775891                         C 0 I 93
s Vicugna_pacos.KN269600.1                                1525187 4 -   2331223 taa-g
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                138823 4 -    281493 TAA-G
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       127402 4 -    134049 TAA-G
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        214803 4 -    227762 TAA-G
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     16022 4 -     20485 taa-a
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 I 307
s Ziphius_cavirostris.ZipCav_flattened_line_127025           7439 4 -      8775 TAA-G
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                701732 90 +    802869 I
e Procavia_capensis.ProCapCap_scaffold_149274                2467 1156 -      9567 I
e Odocoileus_virginianus.KZ101650.1                       1080205 0 +   1425656 C
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Megaderma_lyra.MegLyr_scaffold_3562                       64783 239 -    234502 I
e Heterohyrax_brucei.HetBruBak_scaffold_25354               61360 1157 +     73687 I
e Crocidura_indochinensis.CroInd_scaffold_848148              199 0 +      1327 C
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1008 325 -      5782 I
e Hylobates_klossii.k141_285563                               343 193 +      1026 I
e Microtus_ochrogaster.CM001673.1                        22820341 4 -  98408828 I
e Rattus_norvegicus.chr11                                13915860 1475 +  90463843 I
e Ondatra_zibethicus.OndZib_scaffold_6821                  125594 4 +    145789 I
e Nannospalax_galili.KL201303.1                            119159 6 +    362372 I
e Graphiurus_murinus.GraMur_scaffold_4493                   77863 0 +    118900 C
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I
e Ellobius_talpinus.LOJH01090055.1                           7151 4 -      7838 I
e Ellobius_lutescens.LOEQ01003611.1                        240029 1 -    369425 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               12375 7 +    209709 AA-CAAT---T
s Acinonyx_jubatus.LLWD01000356.1                         2034508 8 +   3721120 AAACAAC---C
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    113080 2 -    189883 t----a-----
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 I 2
s Ailuropoda_melanoleuca.LNAT01000321.1                  10657844 8 +  23371972 AAACAAc---t
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7095192 8 -  16596857 AAACAac---c
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   17421 8 -     22067 AATCAAT---A
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   1890 7 -     60446 AA-CAAT---T
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         2610 7 -     29318 AA-CAAT---T
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         1545 7 +     38766 AA-CAAT---T
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          2504 7 -     80423 AA-CAAT---T
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            10807 7 -     18050 AA-CAAC---T
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_1710068                                522 7 +      1555 AA-TAAC---T
i Alouatta_caraya.k141_1710068                          C 0 C 0
s Alouatta_discolor.k141_811576                             11480 7 -     21359 AA-CAAC---T
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                1101 7 +      2129 AA-TAAC---T
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_2177643                           485 7 -      1868 AA-TAAC---T
i Alouatta_macconnelli.k141_2177643                     C 0 C 0
s Alouatta_nigerrima.k141_3537692                             534 7 +      1660 AA-TAAC---T
i Alouatta_nigerrima.k141_3537692                       C 0 C 0
s Alouatta_palliata.k141_2764429                              449 7 -      1480 AA-CAAC---T
i Alouatta_palliata.k141_2764429                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            4527 7 -      4927 AA-TAAC---T
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_1531728                             664 7 -      1692 AA-CAAC---T
i Alouatta_seniculus.k141_1531728                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3520643 5 +   4113121 a---aac---t
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      391049 8 -    631301 AA---ACAATT
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            31225 5 +     33004 A---AAC---T
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 63159 7 +     78111 ----AACAACT
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            6101 7 +     22701 ----AACAACT
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5750058 7 +   9889416 ----AACAACT
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             6647 7 -    104377 ----AACAACT
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               6649 7 +     23246 ----AACAACT
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     4198 8 +      5067 AAACAAC---T
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        1712 7 +      9265 AA-CAAC---T
i Arctocebus_calabarensis.k141_587554                   I 157 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 9470 4 -     29036 AA---AC----
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9539918 7 +  39197703 AA-CAAC---T
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             61189 7 +     85812 AA-CAAC---T
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                12202 7 +     89302 AA-CAAC---T
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             16705 7 -     58268 AA-CAAC---T
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             64697 7 +    119057 AA-CAAC---T
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               6668 7 -     25888 AA-CAAC---T
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 7441 7 -     16375 AG-CAAT---T
i Avahi_laniger.k141_2840928                            I 158 C 0
s Avahi_peyrierasi.k141_798820                               1059 7 +      6337 aG-CAAC---T
i Avahi_peyrierasi.k141_798820                          I 158 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26380717 5 +  51448160 a---aac---t
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        5889 5 -     13118 a---aac---t
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   43753 5 -     72089 A---AAC---T
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6560373 5 +   6870073 a---aac---t
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138140484 5 - 161108492 a---aac---t
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     573025 5 -    998990 a---aac---t
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136296217 5 - 158972876 a---aac---t
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1233297 5 -   1914593 a---aac---t
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               114555 7 -    171031 AA-CAAC---T
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 13584 7 +    125063 AA-CAAC---T
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                15627 7 -    216513 AA-CAAC---T
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        8170 7 -    134917 AA-CAAC---T
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3220086 8 -   8989139 aaataac---a
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           397787 8 -  15254737 aaataac---a
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2973523 8 +   6889770 aaataac---a
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11519989 8 +  39901454 AAATAAC---C
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   15014 8 +     87036 AAATAAC---C
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11266656 8 -  35597290 AAATAAc---c
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11089190 8 +  39895921 AAATAAc---c
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16456205 8 -  44759192 AAATAAc---c
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21325718 5 + 157394656 a---aac---t
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135706946 5 - 157403528 a---aac---t
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          309564 4 +    345090 ----AAC---T
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               60249 8 +     67245 AA---ACAATT
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   31638 8 +     33760 GAACAAC---T
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   159406 4 -    276539 A---AAC----
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15787170 8 -  24422027 AAGCAAC---C
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15799106 8 -  24440124 AAGCAAC---A
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       177297 8 +    436027 AAGCAAC---A
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18891400 4 -  29618158 ----AAC---T
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 8944 4 -     26817 ----AAC---T
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                13187 4 +     25043 ----AAC---T
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         8588 4 +     21754 ----AAC---T
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4364404 8 +   7569818 aaacaac---t
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         4161 8 -      9338 AAACAAC---T
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6555836 7 +   6739814 Aa-caat---t
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      27313 7 +     60454 AA-CAAT---T
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          2519 7 -     21101 AA-CAAT---T
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         59828 7 -    107033 AA-CAAT---T
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        2718 7 -     17608 AA-CAAT---T
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          30214 7 +     30494 AA-CAAT---T
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          59059 7 -     59240 AA-CAAT---T
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          2760 7 +     16677 AA-CAAT---T
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           24919 7 +     35983 AA-CAAT---T
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11991445 7 +  12117833 AA-CAAT---T
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46478205 7 +  46592721 AA-CAAT---T
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      41755 7 -     45581 AA-CAAT---T
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       2761 7 +     35577 AA-CAAT---T
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        2536 7 -     25661 AA-CAAT---T
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        2514 7 -     17744 AA-CAAT---T
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        22131 7 +     37128 AA-CAAT---T
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           3297 5 -      6963 TA---AC---C
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           59721 7 -     68416 aa-caaC---T
i Cheirogaleus_major.k141_1157592                       I 158 C 0
s Cheirogaleus_medius.k141_133808                            8765 7 +     13308 aa-caaC---T
i Cheirogaleus_medius.k141_133808                       I 157 C 0
s Cheracebus_lucifer.k141_619653                             6212 7 -     18223 AA-CAAC---T
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             23230 7 +     25473 AA-CAAC---T
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           42270 7 +     57117 AA-CAAC---T
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          46949 7 +     54541 AA-CAAC---T
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15962257 8 +  43084221 AAGCAAC---t
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         71756 7 +    196370 AA-CAAC---T
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          15936 7 +     40510 AA-CAAC---T
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15140124 7 -  15256731 AA-CAAT---T
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      34739 7 -     53260 AA-CAAT---T
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101145292 7 + 101219884 AA-CAAT---T
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                16985 8 -     21363 TATCAAC---T
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           762288 8 +    964067 TATCAAC---t
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10887056 7 +  10971483 Aa-caat---t
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147665221 7 + 156195979 AA-CAAT---T
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            17206 7 +     23629 AA-CAAT---T
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60614117 7 +  78930452 aa-atat---t
i Condylura_cristata.JH655880.1                         C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 279057 8 -    399297 AGCCAAC---C
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53029739 4 +  72327488 A----AG---C
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            52544 8 -     70449 AAACAAC---C
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  208947 8 -    956709 AAATAAC---C
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 31602 8 -     67205 AAACAAC---C
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                18298 8 +     26546 AAGTAAC---T
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             59390 8 -    236241 AAGCAAC---T
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          184164 5 -   6883506 TA---AA---c
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16845590 7 +  31942871 aa-CAAC---T
i Daubentonia_madagascariensis.ctg11                    I 160 C 0
s Delphinapterus_leucas.KZ290064.1                       80037341 5 -  96802777 a---aac---t
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18699528 8 -  18957592 aa---acaatt
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 323057 8 +    993696 aaacaac---t
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   3708 8 +    151128 AAACAAC---T
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   157525 8 +    228994 AAACAAC---T
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3656854 8 +   4240102 aaataaa---a
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 28497 8 +     28912 AAATAAA---A
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                36614 8 -     73477 AAGCAAC---T
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22999446 8 -  44670279 AAACAAC---T
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 12776 8 +     24177 aaataac---t
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1491989 5 +   1727528 a---aac---t
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7816964 8 +  15467074 AAACAGG---T
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85872718 8 +  99434291 AAACAAc---c
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4705096 8 +   6522550 AGACAAC---T
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5853505 8 -   7175178 aaacaag---t
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13352010 8 +  41866177 aaacaag---t
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          13499 8 +     92910 aaacaag---t
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11534789 7 +  16010500 aaagaa----c
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48776174 7 -  48907691 AA-CAAT---T
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          315557 5 +    330699 A---AAC---T
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             62010 5 +     89355 A---AAC---T
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              5766 7 +     13586 aa-caaC---T
i Eulemur_albifrons.k141_715837                         I 161 C 0
s Eulemur_collaris.k141_311830                               5696 7 -      6809 aa-caaC---T
i Eulemur_collaris.k141_311830                          I 160 C 0
s Eulemur_coronatus.k141_3240342                            12173 7 +     36558 aa-caaC---T
i Eulemur_coronatus.k141_3240342                        I 160 C 0
s Eulemur_flavifrons.k141_903901                             8494 7 +     60246 aa-CAAC---T
i Eulemur_flavifrons.k141_903901                        I 160 C 0
s Eulemur_fulvus.k141_653297                                11971 7 +    109717 aa-CAAC---T
i Eulemur_fulvus.k141_653297                            I 161 C 0
s Eulemur_macaco.k141_1341545                               16356 7 +     16540 aa-CAAC---T
i Eulemur_macaco.k141_1341545                           I 160 C 0
s Eulemur_mongoz.k141_825972                                16632 7 +     27497 aa-caaC---T
i Eulemur_mongoz.k141_825972                            I 161 C 0
s Eulemur_rubriventer.k141_411740                           19088 7 +     26808 aa-caaC---T
i Eulemur_rubriventer.k141_411740                       I 160 C 0
s Eulemur_rufus.k141_1620292                                33827 7 +     46535 aa-caaC---T
i Eulemur_rufus.k141_1620292                            I 161 C 0
s Eulemur_sanfordi.k141_186399                              16551 7 -     29447 aa-caaC---T
i Eulemur_sanfordi.k141_186399                          I 161 C 0
s Felis_catus.CM001386.2                                129893463 8 - 159252932 AAACAAC---C
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129280555 8 - 158578461 AAACAAC---C
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 21695 8 +     52776 AAACAAC---C
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Galago_moholi.ctg555                                     211619 7 -    847004 aa-CAAC---T
i Galago_moholi.ctg555                                  I 162 C 0
s Galago_senegalensis.k141_964197                           13993 7 -     43889 aa-caaC---T
i Galago_senegalensis.k141_964197                       I 162 C 0
s Galagoides_demidoff.k141_1769638                          11059 7 +     27357 aa-caaC---T
i Galagoides_demidoff.k141_1769638                      I 160 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               156826 8 +    324696 AAATGAC---C
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    181788 5 -    189561 a---aac---t
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           14282 8 -     18683 AAACAAC---T
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               5893 7 -     14630 AA-CAAT---T
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119652993 7 - 195582420 AA-CAAT---T
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         2542 7 +     10286 aa-caaC---T
i Hapalemur_alaotrensis.k141_1280836                    I 160 C 0
s Hapalemur_gilberti.k141_279011                             1019 7 -     11661 aa-caaC---T
i Hapalemur_gilberti.k141_279011                        I 160 C 0
s Hapalemur_griseus.k141_1387522                             6348 7 +     56096 aa-caaC---T
i Hapalemur_griseus.k141_1387522                        I 160 C 0
s Hapalemur_meridionalis.k141_186231                        29599 7 -     42470 aa-caaC---T
i Hapalemur_meridionalis.k141_186231                    I 160 C 0
s Hapalemur_occidentalis.k141_797938                        46222 7 -     54384 aa-CAAC---T
i Hapalemur_occidentalis.k141_797938                    I 160 C 0
s Helogale_parvula.HelPar_flattened_line_22962              17742 8 +     53719 AAATAAC---T
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                28003 5 -     91191 A---AAC---T
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2551621 8 +  31725842 aaacaac---t
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              147649 5 +    277961 A---AAC---T
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      278920 8 -    477199 aaacaac---t
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              8066 8 -      9143 AAACAAC---T
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      5580 7 -   7690867 AA-CAAT---T
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 17819 8 -     67322 AAACAAC---C
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19521 8 -    119109 AAGCCAC---T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_164775                               384 7 -      2073 AA-CAAT---T
i Hylobates_abbotti.k141_164775                         C 0 C 0
s Hylobates_agilis.k141_1621614                               396 7 -      1673 AA-CAAT---T
i Hylobates_agilis.k141_1621614                         I 150 I 264
s Hylobates_pileatus_b.ContigUN                                 14625274 7 -  25970782 AA-CAAT---T
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            2530 7 -      2977 AA-CAAT---T
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             34433 7 -     60944 AA-CAAT---T
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     6691 8 +     22540 AAACACG---T
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7126377 8 +  13083262 aaacaaT---T
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_5141390                                   1074 7 -      3181 aa-caaC---T
i Indri_indri.k141_5141390                              I 158 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               9546 5 +     17520 A---AAC---T
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8566434 8 +  11848649 aatcaat---a
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               24156 5 +     37189 A---AAC---T
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          50787 7 -    147782 AA-CAAC---T
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                     853 8 +     26176 AGACAAT---T
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258407903 7 - 285822530 aa-CAAC---T
i Lemur_catta.scaffold_1                                I 160 C 0
s Lepilemur_ankaranensis.k141_884009                        24661 7 +     39228 aa-CAAC---T
i Lepilemur_ankaranensis.k141_884009                    I 160 C 0
s Lepilemur_dorsalis.k141_134267                            54045 7 +     63517 aa-CAAC---T
i Lepilemur_dorsalis.k141_134267                        I 160 C 0
s Lepilemur_ruficaudatus.k141_617879                        79309 7 +    116806 aa-CAAC---T
i Lepilemur_ruficaudatus.k141_617879                    I 160 C 0
s Lepilemur_septentrionalis.k141_578524                     32300 7 -     33031 aa-caaC---T
i Lepilemur_septentrionalis.k141_578524                 I 160 C 0
s Leptonychotes_weddellii.KB714749.1                      3086507 8 -   3498232 aaacaac---t
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    13793 8 +     22452 AGACAAC---T
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            136503 5 +   3060487 a---aac---t
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19248930 7 +  19376315 AA-CAAT---T
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           11362 7 +     84689 aa-caaC---T
i Loris_lydekkerianus.k141_550999                       I 156 C 0
s Loris_tardigradus.ctg97                                 3779111 7 +   6799190 aa-caaC---T
i Loris_tardigradus.ctg97                               I 156 C 0
s Loxodonta_africana.GL010040.1                          20595334 8 -  62548349 AAACAAC---t
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11088646 8 +  39895028 AAATAAc---c
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             20665 7 +     74745 AA-CAAT---T
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12707122 7 +  12821369 AA-CAAT---T
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                2764 7 -      3136 AA-CAAT---T
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           47579 7 +     63263 AA-CAAT---T
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                 2287 7 -      2568 AA-CAAT---T
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 2872 7 -      7381 AA-CAAT---T
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  46089 7 -     79256 AA-CAAT---T
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196036196 7 + 196197964 Aa-caat---t
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11446366 7 +  11645122 Aa-caat---t
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   5036 7 -     46448 AA-CAAT---T
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                2710 7 -     13212 AA-CAAT---T
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 16389 7 -     55006 AA-CAAT---T
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43841505 7 +  43892939 AA-CAAT---T
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               17675 7 -     24607 AA-CAAT---T
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               5041 7 -     27140 AA-CAAT---T
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43438090 7 -  43563597 AA-CAAT---T
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4450910 7 -   4543643 AA-CAAT---T
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            146590 8 +    252755 AAGCGAC---T
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             36733 8 +     58827 AAGTGAC---T
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36874196 8 +  64221397 AAACAAC---T
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             1530 8 -     87323 AAACAAC---C
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               13458 4 +     15977 A----AC---C
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1047425 4 -  26018355 A----AC---C
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_227248                    830 5 -      1377 A---AAC---T
i Mesoplodon_bidens.MesBid_scaffold_227248              C 0 C 0
s Microcebus_murinus.CM007691.1                          16510933 7 +  47401472 aa-caac---t
i Microcebus_murinus.CM007691.1                         I 158 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  35446 5 -     48017 AAA---C---T
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               23440 8 -     32043 AA---ACAATT
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8210598 8 +  10048721 aaataac---t
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            35087 8 +     45743 AAATAAC---T
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         2639 7 +     29742 AA-CAAT---T
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        12023 8 -    104932 AAACAAC---T
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     6322 7 +      8497 CA-CAAC---T
i Mirza_zaza.k141_226143                                I 160 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 146931 5 +    154973 A---AAC---T
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                161960 8 +    265003 AA---ACAATT
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  2019 5 -     19904 A---AAC---T
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  145437 8 -    168139 AAACAAC---C
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          20061 8 -    100666 AGACAAC---T
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70767059 4 +  92629107 A----AG---C
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75490119 4 +  98207768 A----AG---C
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67556357 4 +  89017189 a----ag---c
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74331294 4 +  97876770 A----AG---C
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             12564 8 +     98495 GAACAAC---T
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4424899 8 -  28371801 AAACAAc---c
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     90641 8 -    117718 AGACAAC---C
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               968590 8 +   8389877 AGACAAC---T
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5020265 8 +   6462685 AGACAAC---T
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3466174 8 -   3747815 AGACAAC---T
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        11384 8 +     66751 AGACAAC---T
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             5551 8 -      8794 TAACAAC---T
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nasalis_larvatus.k141_153429                               9146 7 +     48152 AA-CAAT---T
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4485413 8 -  14209539 aaacaac---t
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3951543 5 -   4490290 a---aac---t
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Nomascus_annamensis.k141_720788                             528 7 -      1065 AA-CAAT---T
i Nomascus_annamensis.k141_720788                       C 0 C 0
s Nomascus_concolor.k141_581629                                91 7 -      6578 AA-CAAT---T
i Nomascus_concolor.k141_581629                         C 0 C 0
s Nomascus_gabriellae.k141_1004198                            399 7 +      1448 AA-CAAT---T
i Nomascus_gabriellae.k141_1004198                      C 0 C 0
s Nomascus_siki_b.tarseq_80                             25550 7 -  18771707 AA-CAAT---T
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  3253 7 +      4512 AA-CAAT---T
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                31447 8 +   3668941 AAATaac---c
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65567815 7 -  95554990 aa-caaa---T
i Nycticebus_bengalensis.LG16                           I 165 C 0
s Nycticebus_coucang.k141_2051882                            4541 7 +      6470 aa-caaa---T
i Nycticebus_coucang.k141_2051882                       I 165 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65670150 7 +  89412551 aa-caaa---T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     I 165 C 0
s Ochotona_princeps.JH802095.1                            4996540 8 -  23139505 ACATAAT---T
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3686424 8 +  10294119 AAGCAAC---C
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             680080 8 -   3126709 AAACAAc---t
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1080205 2 +   1425656 ------C---T
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         37516 5 +     78940 a---aac---t
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  37616 4 +     62360 A----AC---C
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7225228 5 -   7562323 A---AAC---T
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              58558 8 -     66828 AAACAAC---T
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141876827 8 + 163896628 AGACAGC---T
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      308731 8 -    505867 AAATAAc---c
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        1434 7 -     53940 aa-caaC---T
i Otolemur_crassicaudatus.k141_505435                   I 159 C 0
s Otolemur_garnettii.GL873528.1                          18009414 7 -  38779656 aa-caac---t
i Otolemur_garnettii.GL873528.1                         I 159 C 0
s Ovis_aries.CM001582.2                                 134077794 5 - 275406953 a---aac---t
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      79009 5 +    140051 A---AAC---T
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127575259 7 - 205426864 AA-CAAC---T
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120152413 7 - 196562556 AA-CAAC---T
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  34833 8 +    295523 AAACAAC---C
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3638567 8 +  18214204 AAACAAC---C
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5028242 8 -   6340057 AAACAAC---C
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1066644 5 -   1292953 A---AAC---T
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188156877 7 - 188283584 Aa-caat---t
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             5194 7 +      5367 AA-CAAT---T
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47514262 7 +  47705337 AA-CAAT---T
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 68238 7 -    104429 AA-CAAT---T
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    6774 7 +     14967 AA-CAAT---T
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 2633 7 -      7628 AA-CAAT---T
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    116324 8 -    135482 AAACAAC---C
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           6119 7 -     23713 aa-caaC---T
i Perodicticus_ibeanus.k141_117958                      I 155 C 0
s Perodicticus_potto.k141_713187                            25433 7 -     27972 aa-caaC---T
i Perodicticus_potto.k141_713187                        I 156 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359        342 8 +     49596 AACCAAC---T
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4950863 4 -   8017169 A----AC---C
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    14006 8 -     36578 AAACATC---T
i Petromus_typicus.PetTyp_scaffold_33007                C 0 I 144
s Phocoena_phocoena.PhoPho_flattened_line_11948            121833 4 -    122454 A----AC---T
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1987485                           2660 7 -      5908 AA-CAAT---T
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       3284 7 -     17985 AA-CAAT---T
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            2651 7 +      7694 AA-CAAT---T
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26741129 7 +  26888534 AA-CAAT---T
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            98441 8 +    112873 AGACAAC---T
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             44393 7 -     61926 AA-CAAC---T
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        25778 7 +     78826 AA-CAAC---T
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              9825 7 -     15800 AA-CAAC---T
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        13024 7 -     16101 AA-CAAC---T
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          6252 7 +      9673 AA-CAAC---T
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13475252 7 -  19735023 AA-CAAC---T
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           14155 7 -     31692 AA-CAAC---T
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           5919 5 +     21690 A---AAC---T
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       23495 7 +     44506 AA-CAAC---T
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        23707 7 +     67491 AA-CAAC---T
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      13947 7 -     98129 AA-CAAC---T
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     23547 7 +    147771 AA-CAAC---T
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                          183 7 -     43940 AA-CAAC---T
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          4266 7 -     55515 AA-CAAC---T
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         23620 7 +    152463 AA-CAAC---T
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       1337 7 -    119457 AA-CAAC---T
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         13343 7 +    134592 AA-CAAC---T
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          23930 7 -     75465 AA-CAAC---T
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              187779 7 -    373494 Aa-caat---t
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19808427 7 +  19899266 AA-CAAT---T
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               6390 7 -     15069 AA-CAAT---T
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              6520 7 +     14865 AA-CAAT---T
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6849276 7 +  12164890 aa-caac---t
i Prolemur_simus.MPIZ01000048.1                         I 156 C 0
s Propithecus_coquerelli.NW_012147863.1                     19437 7 -     30946 nn-nnnn---n
i Propithecus_coquerelli.NW_012147863.1                 I 160 C 0
s Propithecus_coronatus.k141_1353159                         4356 7 +     11805 aa-caaC---T
i Propithecus_coronatus.k141_1353159                    I 158 C 0
s Propithecus_diadema.k141_577245                           43699 7 +     52369 aa-caaC---T
i Propithecus_diadema.k141_577245                       I 158 C 0
s Propithecus_edwardsi.k141_1317105                         36086 7 -     44753 aa-CAAC---T
i Propithecus_edwardsi.k141_1317105                     I 158 C 0
s Propithecus_perrieri.k141_7554                            18010 7 +     27322 aa-caaC---T
i Propithecus_perrieri.k141_7554                        I 158 C 0
s Propithecus_tattersalli.k141_907138                       17643 7 -     53241 aa-caaC---T
i Propithecus_tattersalli.k141_907138                   I 155 C 0
s Propithecus_verreauxi.k141_158021                         39907 7 -     48185 aa-caaC---T
i Propithecus_verreauxi.k141_158021                     I 155 C 0
s Psammomys_obesus.NESX01026517.1                           35741 4 +     77221 a----aC---C
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            4600 8 -     27784 aa---acaatt
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        247209 8 -    344369 TAACAAC---C
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13246513 8 -  17261082 aaataac---t
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             604464 8 -   3946241 aaataac---t
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131534847 8 - 161321710 AAACAAC---C
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             30511 7 +     56732 AA-CAAT---T
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6806999 7 +   6970761 AA-CAAT---T
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             6390 7 +     18040 AA-CAAT---T
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                16316 5 +     68503 A---AAC---T
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1788342 8 +   2252614 aaacaac---t
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                             800 7 -     17045 AA-CAAT---T
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206378277 7 - 206558726 AA-CAAT---T
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44857191 7 -  45163003 AA-CATT---T
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                19842 8 +    109198 AAATAAC---C
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       8469 5 +     12214 A---AAC---T
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15673352 7 -  43202129 AA-CAAC---T
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        5265 7 +     34089 AA-CAAC---T
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              5207 7 -     60842 AA-CAAC---T
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              5300 7 +     67014 AA-CAAC---T
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              5278 7 +     60816 AA-CAAC---T
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 5215 7 -     76454 AA-CAAC---T
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17341945 4 -  30362882 ----AAC---T
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         21306 4 -     62485 ----AAC---T
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   32799 7 -    114521 AA-AGAT---T
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        4003 7 +     15331 AA-CAAT---T
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       9396 7 +     20762 AA-CAAT---T
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         119399 7 +    130994 AA-CAAT---T
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           38185 7 +     46263 AA-CAAT---T
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     31305 7 +     42640 AA-CAAT---T
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        14345 7 +     30600 AA-CAAT---T
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  100801 4 -    120886 A----AT---C
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            19405 8 +    739146 AATAAAT---T
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17766980 7 -  27805282 AA----AAACC
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2240293 8 +   2842873 AAACAAT---T
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             235327 8 -    276980 AAACAGC---C
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            28097 8 +     62062 AAACAAC---C
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189272626 4 + 218635234 a---aac----
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        15535 7 -  13920577 AA-CAAT---T
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                 780 8 +     20549 AAATAAC---T
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               15217 8 +     45698 TAACAAC---T
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      807646 8 +   1148477 AAACAAC---T
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  58357 8 +     99546 AAACAAC---T
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               27017 4 +     42269 ----AAC---T
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               60333 4 +     65473 ----AAC---T
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194008399 7 - 194193292 Aa-caat---t
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             39232 8 -     47444 AAACATC---T
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 I 143
s Tolypeutes_matacus.TolMat_scaffold_269431                  6036 5 +      6782 TA---AC---A
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  136597 8 -    259118 AA---ACAATT
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        27501 7 +     38948 AA-CAAT---T
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   21233 7 -     32910 AA-CAAT---T
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      2619 7 -     12939 AA-CAAT---T
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       2555 7 -     14244 AA-CAAT---T
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           43954 7 -     54611 AA-CAAT---T
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        1757 7 -     11566 AA-CAAT---T
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     3934 7 -     15592 AA-CAAT---T
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          2590 7 +     14371 AA-CAAT---T
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                    871 7 +     12481 AA-CAAT---T
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                         747 7 -     24393 AA-CAAT---T
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       5993 7 -     28054 AA-CAAT---T
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44660793 7 -  44834318 AA-CAAT---T
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       3101 7 +     13828 AA-CAAT---T
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   5679 5 +     90398 A---AAC---T
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16085855 8 +  31416278 AAACAAC---T
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2793638 8 -   3938065 GAACAAG---T
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    5824 8 +     13056 GAACAAG---T
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69313944 5 -  96451834 a---aac---t
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   1846 7 +     10241 AC-AGAA---T
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6515337 8 +  28682327 AAACAAC---g
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Vicugna_pacos.KN269600.1                                1525191 8 -   2331223 aaacaac---a
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                138827 8 -    281493 AAATAAC---C
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       127406 8 -    134049 AAACAAC---A
i Xerus_inauris.XerIna_scaffold_7898                    C 0 I 3
s Zalophus_californianus.ZalCal_flattened_line_4097        214807 8 -    227762 AAACAAC---T
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     16333 8 -     20485 aataaat---a
i Zapus_hudsonius.ZapHud_scaffold_64392                 I 307 I 1
s Ziphius_cavirostris.ZipCav_flattened_line_127025           7443 5 -      8775 A---AAC---T
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                701732 90 +    802869 I
e Procavia_capensis.ProCapCap_scaffold_149274                2467 1156 -      9567 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Megaderma_lyra.MegLyr_scaffold_3562                       64783 239 -    234502 I
e Heterohyrax_brucei.HetBruBak_scaffold_25354               61360 1157 +     73687 I
e Crocidura_indochinensis.CroInd_scaffold_848148              199 0 +      1327 C
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1008 325 -      5782 I
e Hylobates_klossii.k141_285563                               343 193 +      1026 I
e Microtus_ochrogaster.CM001673.1                        22820341 4 -  98408828 I
e Varecia_variegata.k141_775891                             25358 93 -     33872 I
e Varecia_rubra.k141_432109                                  5817 93 -     20643 I
e Rattus_norvegicus.chr11                                13915860 1475 +  90463843 I
e Ondatra_zibethicus.OndZib_scaffold_6821                  125594 4 +    145789 I
e Nannospalax_galili.KL201303.1                            119159 6 +    362372 I
e Graphiurus_murinus.GraMur_scaffold_4493                   77863 0 +    118900 C
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I
e Ellobius_talpinus.LOJH01090055.1                           7151 4 -      7838 I
e Ellobius_lutescens.LOEQ01003611.1                        240029 1 -    369425 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               12382 3 +    209709 GG-A
s Acinonyx_jubatus.LLWD01000356.1                         2034516 2 +   3721120 a--g
i Acinonyx_jubatus.LLWD01000356.1                       C 0 I 1
s Ailuropoda_melanoleuca.LNAT01000321.1                  10657852 2 +  23371972 a--g
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 I 1
s Ailurus_fulgens.LNAC01000003.1                          7095200 2 -  16596857 a--g
i Ailurus_fulgens.LNAC01000003.1                        C 0 I 1
s Allactaga_bullata.AllBul_scaffold_70162                   17429 3 -     22067 AA-T
i Allactaga_bullata.AllBul_scaffold_70162               C 0 I 27
s Allenopithecus_nigroviridis.k141_2469532                   1897 3 -     60446 GG-A
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         2617 3 -     29318 GG-A
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         1552 3 +     38766 GG-A
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          2511 3 -     80423 GG-A
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            10814 3 -     18050 GG-A
i Alouatta_belzebul.k141_1818029                        C 0 I 2
s Alouatta_caraya.k141_1710068                                529 3 +      1555 GG-A
i Alouatta_caraya.k141_1710068                          C 0 I 2
s Alouatta_discolor.k141_811576                             11487 3 -     21359 GG-A
i Alouatta_discolor.k141_811576                         C 0 I 2
s Alouatta_juara.k141_1244470                                1108 3 +      2129 GG-A
i Alouatta_juara.k141_1244470                           C 0 I 2
s Alouatta_macconnelli.k141_2177643                           492 3 -      1868 GG-A
i Alouatta_macconnelli.k141_2177643                     C 0 I 2
s Alouatta_nigerrima.k141_3537692                             541 3 +      1660 GG-A
i Alouatta_nigerrima.k141_3537692                       C 0 I 2
s Alouatta_palliata.k141_2764429                              456 3 -      1480 GG-A
i Alouatta_palliata.k141_2764429                        C 0 I 2
s Alouatta_puruensis.k141_1284840                            4534 3 -      4927 GG-A
i Alouatta_puruensis.k141_1284840                       C 0 I 2
s Alouatta_seniculus.k141_1531728                             671 3 -      1692 GG-A
i Alouatta_seniculus.k141_1531728                       C 0 I 2
s Ammotragus_lervia.NIVO01013474.1                        3520648 1 +   4113121 ---a
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      391057 2 -    631301 A--G
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            31230 1 +     33004 ---A
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 63166 3 +     78111 GG-A
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            6108 3 +     22701 GG-A
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5750065 3 +   9889416 GG-A
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             6654 3 -    104377 GG-A
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               6656 3 +     23246 GG-A
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     4206 3 +      5067 GG-A
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        1719 3 +      9265 GG-G
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 9474 2 -     29036 A--G
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9539925 3 +  39197703 GG-A
i Ateles_geoffroyi_b.tarseq_2582                           C 0 I 2
s Ateles_belzebuth.k141_1348307                             61196 3 +     85812 GG-A
i Ateles_belzebuth.k141_1348307                         C 0 I 2
s Ateles_chamek.k141_1072810                                12209 3 +     89302 GG-A
i Ateles_chamek.k141_1072810                            C 0 I 2
s Ateles_geoffroyi_a.k141_1300742                             16712 3 -     58268 GG-A
i Ateles_geoffroyi_a.k141_1300742                         C 0 I 2
s Ateles_marginatus.k141_899112                             64704 3 +    119057 GG-A
i Ateles_marginatus.k141_899112                         C 0 I 2
s Ateles_paniscus.k141_1631200                               6675 3 -     25888 GG-A
i Ateles_paniscus.k141_1631200                          C 0 I 2
s Avahi_laniger.k141_2840928                                 7448 3 -     16375 GG-G
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               1066 3 +      6337 GG-G
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26380722 3 +  51448160 a-ga
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        5894 3 -     13118 a-ga
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   43758 1 -     72089 ---A
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6560378 1 +   6870073 ---a
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138140489 1 - 161108492 ---a
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     573030 1 -    998990 ---a
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136296222 1 - 158972876 ---a
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1233302 1 -   1914593 ---a
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               114562 3 -    171031 GG-A
i Cacajao_ayresi.k141_724503                            C 0 I 2
s Cacajao_calvus.k141_96166                                 13591 3 +    125063 GG-A
i Cacajao_calvus.k141_96166                             C 0 I 2
s Cacajao_hosomi.k141_303789                                15634 3 -    216513 GG-A
i Cacajao_hosomi.k141_303789                            C 0 I 2
s Cacajao_melanocephalus.k141_1160263                        8177 3 -    134917 GG-A
i Cacajao_melanocephalus.k141_1160263                   C 0 I 2
s Camelus_bactrianus.KN276303.1                           3220094 2 -   8989139 a--g
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           397795 2 -  15254737 a--g
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2973531 2 +   6889770 a--g
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11519997 2 +  39901454 A--G
i CanFam4.chr31                                         C 0 I 1
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   15022 2 +     87036 A--G
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 I 1
s Canis_lupus_dingo.QKWQ01001993.1                       11266664 2 -  35597290 a--g
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 I 1
s Canis_lupus_familiaris.chr31                           11089198 2 +  39895921 a--g
i Canis_lupus_familiaris.chr31                          C 0 I 1
s Canis_lupus_orion.HG994411.1                           16456213 2 -  44759192 a--g
i Canis_lupus_orion.HG994411.1                          C 0 I 1
s Capra_aegagrus.CM003214.1                              21325723 1 + 157394656 ---a
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135706951 1 - 157403528 ---a
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          309568 3 +    345090 TC-A
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               60257 2 +     67245 A--G
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   31646 1 +     33760 ---G
i Castor_canadensis.CasCan_scaffold_47037               C 0 I 2
s Catagonus_wagneri.CatWag_scaffold_1305                   159410 2 -    276539 T--A
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15787178 3 -  24422027 GT-G
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15799114 3 -  24440124 GT-G
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       177305 3 +    436027 GT-G
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18891404 3 -  29618158 GG-A
i Cebus_albifrons.Contig22                              C 0 I 2
s Cebus_olivaceus.k141_93739                                 8948 3 -     26817 GG-A
i Cebus_olivaceus.k141_93739                            C 0 I 2
s Cebus_unicolor.k141_239009                                13191 3 +     25043 GG-A
i Cebus_unicolor.k141_239009                            C 0 I 2
s Cephalopachus_bancanus.k141_702587                         8592 3 +     21754 TC-A
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4364412 2 +   7569818 a--g
i Ceratotherium_simum.JH767818.1                        C 0 I 1
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         4169 2 -      9338 A--G
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 I 1
s Cercocebus_atys.KQ010443.1                              6555843 3 +   6739814 gg-a
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      27320 3 +     60454 GG-A
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          2526 3 -     21101 GG-A
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         59835 3 -    107033 GG-A
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        2725 3 -     17608 GG-A
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          30221 3 +     30494 GG-A
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          59066 3 -     59240 GG-A
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          2767 3 +     16677 GG-A
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           24926 3 +     35983 GG-A
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11991452 3 +  12117833 GG-A
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46478212 3 +  46592721 GG-A
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      41762 3 -     45581 GG-A
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       2768 3 +     35577 GG-A
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        2543 3 -     25661 GG-A
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        2521 3 -     17744 GG-A
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        22138 3 +     37128 GG-A
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           3302 3 -      6963 AG-A
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           59728 3 -     68416 GG-A
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            8772 3 +     13308 GG-G
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             6219 3 -     18223 GG-A
i Cheracebus_lucifer.k141_619653                        C 0 I 2
s Cheracebus_lugens.k141_203936                             23237 3 +     25473 GG-A
i Cheracebus_lugens.k141_203936                         C 0 I 2
s Cheracebus_regulus.k141_2128895                           42277 3 +     57117 GG-A
i Cheracebus_regulus.k141_2128895                       C 0 I 2
s Cheracebus_torquatus.k141_315545                          46956 3 +     54541 GG-A
i Cheracebus_torquatus.k141_315545                      C 0 I 2
s Chinchilla_lanigera.JH721867.1                         15962265 3 +  43084221 gt-g
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         71763 3 +    196370 GG-A
i Chiropotes_israelita.k141_1189915                     C 0 I 2
s Chiropotes_sagulatus.k141_773804                          15943 3 +     40510 GG-A
i Chiropotes_sagulatus.k141_773804                      C 0 I 2
s Chlorocebus_aethiops.ctg22                             15140131 3 -  15256731 GG-A
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      34746 3 -     53260 GG-A
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101145299 3 + 101219884 ag-a
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                16993 3 -     21363 AG-A
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           762296 3 +    964067 ag-a
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10887063 3 +  10971483 gg-a
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147665228 3 + 156195979 GG-A
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            17213 3 +     23629 GG-A
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60614124 2 +  78930452 g--a
i Condylura_cristata.JH655880.1                         C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 279065 3 -    399297 AA-A
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53029743 1 +  72327488 A---
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            52552 2 -     70449 A--G
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 I 1
s Ctenodactylus_gundi.CteGun_scaffold_447                  208955 3 -    956709 AA-T
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 31610 3 -     67205 TT-A
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                18306 3 +     26546 GT-G
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             59398 3 -    236241 GT-G
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          184169 3 -   6883506 ag-a
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16845597 3 +  31942871 GG-G
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80037346 3 -  96802777 a-ga
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18699536 2 -  18957592 a--g
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 323065 2 +    993696 a--g
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 I 1
s Diceros_bicornis.DicBicMic_scaffold_9545                   3716 2 +    151128 A--G
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 I 1
s Dinomys_branickii.DinBra_scaffold_1996                   157533 3 +    228994 GT-G
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3656862 4 +   4240102 aata
i Dipodomys_ordii.KN672545.1                            C 0 I 32
s Dipodomys_stephensi.DipSte_scaffold_44365                 28505 4 +     28912 AATA
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 I 32
s Dolichotis_patagonum.DolPat_scaffold_14102                36622 3 -     73477 GT-G
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22999454 3 -  44670279 AT-g
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 12784 2 +     24177 a--g
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1491994 1 +   1727528 ---a
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7816972 3 +  15467074 AT-G
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85872726 2 +  99434291 a--g
i Enhydra_lutris.KZ291749.1                             C 0 I 1
s Eptesicus_fuscus.JH977687.1                             4705104 2 +   6522550 A--G
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5853513 2 -   7175178 a--g
i Equus_asinus.JREZ01000062.1                           C 0 I 1
s Equus_caballus.CM000402.2                              13352018 2 +  41866177 a--g
i Equus_caballus.CM000402.2                             C 0 I 1
s Equus_przewalskii.ATBW01073585.1                          13507 2 +     92910 a--g
i Equus_przewalskii.ATBW01073585.1                      C 0 I 1
s Erinaceus_europaeus.JH835290.1                         11534796 2 +  16010500 t--A
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48776181 3 -  48907691 GG-A
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          315562 3 +    330699 A-GA
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             62015 3 +     89355 A-GA
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              5773 3 +     13586 GG-G
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               5703 3 -      6809 GG-G
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            12180 3 +     36558 GG-G
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             8501 3 +     60246 GG-G
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                11978 3 +    109717 GG-G
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_1341545                               16363 3 +     16540 GG-G
i Eulemur_macaco.k141_1341545                           C 0 C 0
s Eulemur_mongoz.k141_825972                                16639 3 +     27497 GG-G
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           19095 3 +     26808 GG-G
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                33834 3 +     46535 GG-G
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              16558 3 -     29447 GG-G
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129893471 2 - 159252932 a--g
i Felis_catus.CM001386.2                                C 0 I 1
s Felis_catus_fca126.CM031420.1                         129280563 2 - 158578461 a--g
i Felis_catus_fca126.CM031420.1                         C 0 I 1
s Felis_nigripes.FelNig_flattened_line_8080                 21703 2 +     52776 A--G
i Felis_nigripes.FelNig_flattened_line_8080             C 0 I 1
s Galago_moholi.ctg555                                     211626 3 -    847004 GG-G
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           14000 3 -     43889 GG-G
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          11066 3 +     27357 GG-G
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               156834 3 +    324696 AG-T
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    181793 1 -    189561 ---a
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           14290 1 -     18683 G---
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               5900 3 -     14630 GG-A
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119653000 3 - 195582420 gg-a
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         2549 3 +     10286 GG-G
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             1026 3 -     11661 GG-G
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             6355 3 +     56096 GG-G
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        29606 3 -     42470 GG-G
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        46229 3 -     54384 GG-G
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              17750 2 +     53719 A--G
i Helogale_parvula.HelPar_flattened_line_22962          C 0 I 1
s Hemitragus_hylocrius.HemHyl_scaffold_16669                28008 1 -     91191 ---A
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2551629 2 +  31725842 gt--
i Heterocephalus_glaber.JH602058.1                      C 0 I 1
s Hippopotamus_amphibius.HipAmp_scaffold_1308              147654 1 +    277961 A---
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      278928 2 -    477199 a--g
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              8074 2 -      9143 A--G
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      5587 3 -   7690867 GG-A
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 17827 2 -     67322 A--G
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 I 1
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19529 3 -    119109 GT-G
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_164775                               391 3 -      2073 GG-A
i Hylobates_abbotti.k141_164775                         C 0 C 0
s Hylobates_agilis.k141_1878600                               628 3 -      1230 GG-A
i Hylobates_agilis.k141_1878600                         I 7 C 0
s Hylobates_pileatus_b.ContigUN                                 14625281 3 -  25970782 GG-A
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            2537 3 -      2977 GG-A
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             34440 3 -     60944 GG-A
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     6699 3 +     22540 GG-G
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7126385 3 +  13083262 GA-A
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_5141390                                   1081 3 -      3181 GG-G
i Indri_indri.k141_5141390                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               9551 3 +     17520 G-GA
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8566442 3 +  11848649 aa-t
i Jaculus_jaculus.JH725517.1                            C 0 I 27
s Kogia_breviceps.KogBre_flattened_line_35920               24161 3 +     37189 A-GA
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          50794 3 -    147782 GG-A
i Lagothrix_lagothricha.k141_12968                      C 0 I 2
s Lasiurus_borealis.LasBor_scaffold_59542                     861 2 +     26176 A--g
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258407910 3 - 285822530 GG-G
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        24668 3 +     39228 GG-G
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            54052 3 +     63517 GG-G
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        79316 3 +    116806 GG-G
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     32307 3 -     33031 GG-G
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3086515 2 -   3498232 a--g
i Leptonychotes_weddellii.KB714749.1                    C 0 I 1
s Lepus_americanus.LepAme_scaffold_62849                    13801 3 +     22452 GG-G
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            136508 3 +   3060487 a-ga
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19248937 3 +  19376315 GG-A
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           11369 2 +     84689 -G-G
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3779118 2 +   6799190 -G-G
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20595342 3 -  62548349 gt-g
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11088654 2 +  39895028 a--g
i Lycaon_pictus.CM007556.1                              C 0 I 1
s Macaca_arctoides.k141_2201161                             20672 3 +     74745 GG-A
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12707129 3 +  12821369 GG-A
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                2771 3 -      3136 GG-A
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           47586 3 +     63263 GG-A
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                 2294 3 -      2568 GG-A
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 2879 3 -      7381 GG-A
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  46096 3 -     79256 GG-A
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196036203 3 + 196197964 gg-a
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11446373 3 +  11645122 gg-a
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   5043 3 -     46448 GG-A
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                2717 3 -     13212 GG-A
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 16396 3 -     55006 GG-A
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43841512 3 +  43892939 GG-A
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               17682 3 -     24607 GG-A
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               5048 3 -     27140 GG-A
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43438097 3 -  43563597 GG-A
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4450917 3 -   4543643 GG-A
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            146598 2 +    252755 A--g
i Manis_javanica.JSZB01003966.1                         C 0 I 1
s Manis_pentadactyla.KN017078.1                             36741 2 +     58827 A--g
i Manis_pentadactyla.KN017078.1                         C 0 I 1
s Marmota_marmota.CZRN01000005.1                         36874204 3 +  64221397 GA-A
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             1538 2 -     87323 A--G
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 I 1
s Meriones_unguiculatus.MerUng_scaffold_52233               13462 3 +     15977 AG-A
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1047429 1 -  26018355 A---
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_227248                    835 3 -      1377 A-GA
i Mesoplodon_bidens.MesBid_scaffold_227248              C 0 C 0
s Microcebus_murinus.CM007691.1                          16510940 3 +  47401472 gg-g
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  35451 3 -     48017 AT-G
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               23448 2 -     32043 A--G
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8210606 2 +  10048721 a--g
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            35095 2 +     45743 A--G
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         2646 3 +     29742 GG-A
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        12031 2 -    104932 A--G
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 I 1
s Mirza_zaza.k141_226143                                     6329 3 +      8497 GG-G
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 146936 3 +    154973 A-GA
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                161968 2 +    265003 A--G
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  2024 1 -     19904 ---A
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  145445 2 -    168139 A--G
i Mungos_mungo.MunMun_flattened_line_8729               C 0 I 1
s Murina_feae.MurFea_scaffold_2254                          20069 2 -    100666 A--G
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70767063 3 +  92629107 AG-A
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75490123 3 +  98207768 AG-A
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67556361 3 +  89017189 ag-a
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74331298 3 +  97876770 AG-A
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             12572 1 +     98495 G---
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4424907 2 -  28371801 a--g
i Mustela_putorius.JH417978.1                           C 0 I 1
s Myocastor_coypus.MyoCoy_scaffold_3653                     90649 3 -    117718 TT-A
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               968598 2 +   8389877 A--G
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5020273 2 +   6462685 A--G
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3466182 2 -   3747815 A--G
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        11392 2 +     66751 A--G
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             5559 3 -      8794 AG-A
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nasalis_larvatus.k141_153429                               9153 3 +     48152 GG-A
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4485421 2 -  14209539 a--g
i Neomonachus_schauinslandi.NINY01007774.1              C 0 I 1
s Neophocaena_asiaeorientalis.KZ688543.1                  3951548 3 -   4490290 a-ga
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Nomascus_annamensis.k141_720788                             535 3 -      1065 GG-A
i Nomascus_annamensis.k141_720788                       C 0 C 0
s Nomascus_concolor.k141_581629                                98 3 -      6578 GG-A
i Nomascus_concolor.k141_581629                         C 0 I 7
s Nomascus_gabriellae.k141_1004198                            406 3 +      1448 GG-A
i Nomascus_gabriellae.k141_1004198                      C 0 C 0
s Nomascus_siki_b.tarseq_80                             25557 3 -  18771707 GG-A
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  3260 3 +      4512 GG-A
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                31455 2 +   3668941 a--g
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 I 1
s Nycticebus_bengalensis.LG16                            65567822 3 -  95554990 AG-G
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            4548 3 +      6470 AG-G
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65670157 3 +  89412551 GG-G
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4996548 3 -  23139505 GG-G
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3686432 3 +  10294119 tt-a
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             680088 2 -   3126709 a--g
i Odobenus_rosmarus.KB229369.1                          C 0 I 1
s Odocoileus_virginianus.KZ101650.1                       1080207 1 +   1425656 ---A
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         37521 1 +     78940 ---a
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  37620 1 +     62360 A---
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7225233 3 -   7562323 a-ga
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              58566 3 -     66828 AT-G
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141876835 3 + 163896628 Gg-g
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      308739 2 -    505867 a--g
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 I 1
s Otolemur_crassicaudatus.k141_505435                        1441 3 -     53940 GG-G
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18009421 3 -  38779656 gg-g
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134077799 1 - 275406953 ---a
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      79014 1 +    140051 ---A
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127575266 3 - 205426864 gg-a
i Pan_paniscus.CM003386.1                               C 0 I 7
s Pan_troglodytes.CM009241.2                            120152420 3 - 196562556 Gg-a
i Pan_troglodytes.CM009241.2                            C 0 I 7
s Panthera_onca.PanOnc_flattened_line_1615                  34841 2 +    295523 A--G
i Panthera_onca.PanOnc_flattened_line_1615              C 0 I 1
s Panthera_pardus.KV860323.1                              3638575 2 +  18214204 a--g
i Panthera_pardus.KV860323.1                            C 0 I 1
s Panthera_tigris.KE721879.1                              5028250 2 -   6340057 a--g
i Panthera_tigris.KE721879.1                            C 0 I 1
s Pantholops_hodgsonii.KE114631.1                         1066649 1 -   1292953 ---A
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188156884 3 - 188283584 gg-a
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             5201 3 +      5367 GG-A
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47514269 3 +  47705337 GG-A
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 68245 3 -    104429 GG-A
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    6781 3 +     14967 GG-A
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 2640 3 -      7628 GG-A
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    116332 2 -    135482 A--G
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 I 1
s Perodicticus_ibeanus.k141_117958                           6126 3 -     23713 GG-G
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            25440 3 -     27972 GG-G
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359        350 4 +     49596 GGAG
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 I 226
s Peromyscus_maniculatus.KI615518.1                       4950867 1 -   8017169 A---
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    14158 3 -     36578 GT-A
i Petromus_typicus.PetTyp_scaffold_33007                I 144 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            121837 3 -    122454 A-GA
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1987485                           2667 3 -      5908 GC-A
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       3291 3 -     17985 GC-A
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            2658 3 +      7694 GC-A
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26741136 3 +  26888534 gc-a
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            98449 2 +    112873 A--T
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             44400 3 -     61926 GG-A
i Pithecia_albicans.k141_991845                         C 0 I 2
s Pithecia_chrysocephala.k141_159118                        25785 3 +     78826 GG-A
i Pithecia_chrysocephala.k141_159118                    C 0 I 2
s Pithecia_hirsuta.k141_1152968                              9832 3 -     15800 GG-A
i Pithecia_hirsuta.k141_1152968                         C 0 I 2
s Pithecia_mittermeieri.k141_2119203                        13031 3 -     16101 GG-A
i Pithecia_mittermeieri.k141_2119203                    C 0 I 2
s Pithecia_pissinattii.k141_1102319                          6259 3 +      9673 GG-A
i Pithecia_pissinattii.k141_1102319                     C 0 I 2
s Pithecia_pithecia.tarseq_313                           13475259 3 -  19735023 GG-A
i Pithecia_pithecia.tarseq_313                          C 0 I 2
s Pithecia_vanzolinii.k141_831006                           14162 3 -     31692 GG-A
i Pithecia_vanzolinii.k141_831006                       C 0 I 2
s Platanista_gangetica.PlaMin_flattened_line_72990           5924 3 +     21690 A-GA
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       23502 3 +     44506 GG-A
i Plecturocebus_bernhardi.k141_959214                   C 0 I 2
s Plecturocebus_brunneus.k141_498086                        23714 3 +     67491 GG-A
i Plecturocebus_brunneus.k141_498086                    C 0 I 2
s Plecturocebus_caligatus.k141_2539816                      13954 3 -     98129 GG-A
i Plecturocebus_caligatus.k141_2539816                  C 0 I 2
s Plecturocebus_cinerascens.k141_744510                     23554 3 +    147771 GG-A
i Plecturocebus_cinerascens.k141_744510                 C 0 I 2
s Plecturocebus_cupreus.k141_1145860                          190 3 -     43940 GG-A
i Plecturocebus_cupreus.k141_1145860                    C 0 I 2
s Plecturocebus_dubius.k141_3565563                          4273 3 -     55515 GG-A
i Plecturocebus_dubius.k141_3565563                     C 0 I 2
s Plecturocebus_grovesi.k141_242819                         23627 3 +    152463 GG-A
i Plecturocebus_grovesi.k141_242819                     C 0 I 2
s Plecturocebus_hoffmannsi.k141_985533                       1344 3 -    119457 GG-A
i Plecturocebus_hoffmannsi.k141_985533                  C 0 I 2
s Plecturocebus_miltoni.k141_841561                         13350 3 +    134592 GG-A
i Plecturocebus_miltoni.k141_841561                     C 0 I 2
s Plecturocebus_moloch.k141_890597                          23937 3 -     75465 GG-A
i Plecturocebus_moloch.k141_890597                      C 0 I 2
s Pongo_abelii.NDHI03003816.1                              187786 3 -    373494 gg-a
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19808434 3 +  19899266 GG-A
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               6397 3 -     15069 GG-A
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              6527 3 +     14865 GG-A
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6849283 3 +  12164890 gg-g
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     19444 3 -     30946 nn-n
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         4363 3 +     11805 GG-G
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           43706 3 +     52369 GG-G
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         36093 3 -     44753 GG-G
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            18017 3 +     27322 GG-G
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       17650 3 -     53241 GG-G
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         39914 3 -     48185 GG-G
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           35745 3 +     77221 AG-A
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            4608 2 -     27784 a--g
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        247217 2 -    344369 A--G
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 I 1
s Pteropus_alecto.KB031157.1                             13246521 2 -  17261082 a--g
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             604472 2 -   3946241 a--g
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131534855 2 - 161321710 a--g
i Puma_concolor.QAVW01000427.1                          C 0 I 1
s Pygathrix_cinerea.k141_374971                             30518 3 +     56732 GG-A
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6807006 3 +   6970761 GG-A
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             6397 3 +     18040 GG-A
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                16321 1 +     68503 ---A
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1788350 2 +   2252614 a--G
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                             807 3 -     17045 GG-A
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206378284 3 - 206558726 GG-A
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44857198 3 -  45163003 GG-A
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                19850 2 +    109198 A--G
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       8474 1 +     12214 ---A
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15673359 3 -  43202129 GG-A
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        5272 3 +     34089 GG-A
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              5214 3 -     60842 GG-A
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              5307 3 +     67014 GG-A
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              5285 3 +     60816 GG-A
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 5222 3 -     76454 GG-A
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17341949 3 -  30362882 GG-A
i Sapajus_apella.ctg10                                  C 0 I 2
s Sapajus_macrocephalus.k141_966464                         21310 3 -     62485 GG-A
i Sapajus_macrocephalus.k141_966464                     C 0 I 2
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   32806 2 -    114521 G--A
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        4010 3 +     15331 GG-A
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       9403 3 +     20762 GG-A
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         119406 3 +    130994 GG-A
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           38192 3 +     46263 GG-A
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     31312 3 +     42640 TG-A
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        14352 3 +     30600 GG-A
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  100805 1 -    120886 A---
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            19413 2 +    739146 T--A
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17766987 2 -  27805282 T--a
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2240301 3 +   2842873 GA-A
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             235335 2 -    276980 A--G
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 I 1
s Suricata_suricatta.SurSur_flattened_line_20339            28105 2 +     62062 A--G
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 I 1
s Sus_scrofa.CM000824.4                                 189272630 2 + 218635234 t--a
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        15542 3 -  13920577 AG-A
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                 788 2 +     20549 A--G
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               15225 3 +     45698 AG-A
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      807654 2 +   1148477 A--G
i Tapirus_indicus.TapInd_scaffold_176                   C 0 I 1
s Tapirus_terrestris.TapTer_scaffold_14939                  58365 2 +     99546 A--G
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 I 1
s Tarsius_lariang.k141_609102                               27021 3 +     42269 TG-G
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               60337 3 +     65473 TG-G
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194008406 3 - 194193292 gg-a
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             39383 3 -     47444 GT-G
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         I 143 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  6041 3 +      6782 AG-A
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  136605 2 -    259118 A--G
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        27508 3 +     38948 GG-A
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   21240 3 -     32910 GG-A
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      2626 3 -     12939 GG-A
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       2562 3 -     14244 GG-A
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           43961 3 -     54611 GG-A
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        1764 3 -     11566 GG-A
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     3941 3 -     15592 GG-A
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          2597 3 +     14371 GG-A
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                    878 3 +     12481 GG-A
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                         754 3 -     24393 GG-A
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       6000 3 -     28054 GG-A
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44660800 3 -  44834318 GG-A
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       3108 3 +     13828 GG-A
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   5684 1 +     90398 ---A
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16085863 3 +  31416278 at-g
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2793646 3 -   3938065 AG-G
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    5832 3 +     13056 AG-G
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69313949 3 -  96451834 a-ga
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   1853 2 +     10241 A--A
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6515345 2 +  28682327 a--g
i Ursus_maritimus.KK498671.1                            C 0 I 1
s Vicugna_pacos.KN269600.1                                1525199 2 -   2331223 a--g
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                138835 2 -    281493 A--G
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 I 1
s Xerus_inauris.XerIna_scaffold_7898                       127417 3 -    134049 GA-A
i Xerus_inauris.XerIna_scaffold_7898                    I 3 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        214815 2 -    227762 A--G
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 I 1
s Zapus_hudsonius.ZapHud_scaffold_64392                     16342 3 -     20485 aa-t
i Zapus_hudsonius.ZapHud_scaffold_64392                 I 1 I 23
s Ziphius_cavirostris.ZipCav_flattened_line_127025           7448 3 -      8775 A-GA
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                701732 90 +    802869 I
e Procavia_capensis.ProCapCap_scaffold_149274                2467 1156 -      9567 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Megaderma_lyra.MegLyr_scaffold_3562                       64783 239 -    234502 I
e Heterohyrax_brucei.HetBruBak_scaffold_25354               61360 1157 +     73687 I
e Crocidura_indochinensis.CroInd_scaffold_848148              199 0 +      1327 C
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1008 325 -      5782 I
e Hylobates_klossii.k141_285563                               343 193 +      1026 I
e Microtus_ochrogaster.CM001673.1                        22820341 4 -  98408828 I
e Varecia_variegata.k141_775891                             25358 93 -     33872 I
e Varecia_rubra.k141_432109                                  5817 93 -     20643 I
e Rattus_norvegicus.chr11                                13915860 1475 +  90463843 I
e Ondatra_zibethicus.OndZib_scaffold_6821                  125594 4 +    145789 I
e Nannospalax_galili.KL201303.1                            119159 6 +    362372 I
e Graphiurus_murinus.GraMur_scaffold_4493                   77863 0 +    118900 C
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I
e Ellobius_talpinus.LOJH01090055.1                           7151 4 -      7838 I
e Ellobius_lutescens.LOEQ01003611.1                        240029 1 -    369425 I
e Acomys_cahirinus.AcoCah_scaffold_1625                    113082 2 -    189883 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               12385  7 +    209709 GA----------A--A----------AT-----T
s Acinonyx_jubatus.LLWD01000356.1                         2034519  6 +   3721120 ga----------a--g----------a------t
i Acinonyx_jubatus.LLWD01000356.1                       I 1 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    113084  3 -    189883 ---------------t----------a------t
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 2 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10657855  6 +  23371972 ga----------a--g----------a------t
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 1 C 0
s Ailurus_fulgens.LNAC01000003.1                          7095203  6 -  16596857 ga----------a--g----------a------t
i Ailurus_fulgens.LNAC01000003.1                        I 1 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   17459  6 -     22067 GA----------A--G----------T------T
i Allactaga_bullata.AllBul_scaffold_70162               I 27 C 0
s Allenopithecus_nigroviridis.k141_2469532                   1900  7 -     60446 GA----------A--A----------AT-----T
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         2620  7 -     29318 GA----------A--A----------AT-----T
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         1555  7 +     38766 GA----------A--A----------AT-----T
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          2514  7 -     80423 GA----------A--A----------AT-----T
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            10819  2 -     18050 ---------------------------T-----T
i Alouatta_belzebul.k141_1818029                        I 2 C 0
s Alouatta_caraya.k141_1710068                                534  2 +      1555 ---------------------------T-----T
i Alouatta_caraya.k141_1710068                          I 2 C 0
s Alouatta_discolor.k141_811576                             11492  2 -     21359 ---------------------------T-----T
i Alouatta_discolor.k141_811576                         I 2 C 0
s Alouatta_juara.k141_1244470                                1113  2 +      2129 ---------------------------T-----T
i Alouatta_juara.k141_1244470                           I 2 C 0
s Alouatta_macconnelli.k141_2177643                           497  2 -      1868 ---------------------------T-----T
i Alouatta_macconnelli.k141_2177643                     I 2 C 0
s Alouatta_nigerrima.k141_3537692                             546  2 +      1660 ---------------------------T-----T
i Alouatta_nigerrima.k141_3537692                       I 2 C 0
s Alouatta_palliata.k141_2764429                              461  2 -      1480 ---------------------------T-----T
i Alouatta_palliata.k141_2764429                        I 2 C 0
s Alouatta_puruensis.k141_1284840                            4539  2 -      4927 ---------------------------T-----T
i Alouatta_puruensis.k141_1284840                       I 2 C 0
s Alouatta_seniculus.k141_1531728                             676  2 -      1692 ---------------------------T-----T
i Alouatta_seniculus.k141_1531728                       I 2 C 0
s Ammotragus_lervia.NIVO01013474.1                        3520649  6 +   4113121 ga----------a--a----------a------g
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      391059  3 -    631301 GG----------A---------------------
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            31231  6 +     33004 GA----------A--A----------A------T
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 63169  2 +     78111 GA--------------------------------
i Aotus_azarae.k141_3170768                             C 0 I 2
s Aotus_griseimembra.k141_3275623                            6111  2 +     22701 GA--------------------------------
i Aotus_griseimembra.k141_3275623                       C 0 I 2
s Aotus_nancymaae.KZ196176.1                              5750068  2 +   9889416 GA--------------------------------
i Aotus_nancymaae.KZ196176.1                            C 0 I 2
s Aotus_trivirgatus.k141_1740727                             6657  2 -    104377 GA--------------------------------
i Aotus_trivirgatus.k141_1740727                        C 0 I 2
s Aotus_vociferans.k141_718647                               6659  2 +     23246 GA--------------------------------
i Aotus_vociferans.k141_718647                          C 0 I 2
s Aplodontia_rufa.AprRuf_scaffold_156013                     4209  6 +      5067 GG----------G--G----------A------T
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        1722  6 +      9265 GA----------T--G----------T------T
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9539930  2 +  39197703 ---------------------------T-----T
i Ateles_geoffroyi_b.tarseq_2582                           I 2 C 0
s Ateles_belzebuth.k141_1348307                             61201  2 +     85812 ---------------------------T-----T
i Ateles_belzebuth.k141_1348307                         I 2 C 0
s Ateles_chamek.k141_1072810                                12214  2 +     89302 ---------------------------T-----T
i Ateles_chamek.k141_1072810                            I 2 C 0
s Ateles_geoffroyi_a.k141_1300742                             16717  2 -     58268 ---------------------------T-----T
i Ateles_geoffroyi_a.k141_1300742                         I 2 C 0
s Ateles_marginatus.k141_899112                             64709  2 +    119057 ---------------------------T-----T
i Ateles_marginatus.k141_899112                         I 2 C 0
s Ateles_paniscus.k141_1631200                               6680  2 -     25888 ---------------------------T-----T
i Ateles_paniscus.k141_1631200                          I 2 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 9476  3 -     29036 GG----------A---------------------
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Avahi_laniger.k141_2840928                                 7451  6 -     16375 GA----------A--G----------A------T
i Avahi_laniger.k141_2840928                            C 0 I 8
s Avahi_peyrierasi.k141_798820                               1069  6 +      6337 GA----------A--G----------A------T
i Avahi_peyrierasi.k141_798820                          C 0 I 8
s Balaenoptera_acutorostrata.KI537095.1                  26380725  6 +  51448160 ga----------a--g----------a------t
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        5897  6 -     13118 ga----------a--g----------a------t
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   43759  6 -     72089 GA----------A--A----------A------G
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6560379  6 +   6870073 ga----------a--a----------a------g
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138140490  6 - 161108492 ga----------a--a----------a------g
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     573031  6 -    998990 ga----------a--a----------a------g
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136296223  6 - 158972876 ga----------a--a----------a------g
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1233303  6 -   1914593 ga----------a--a----------a------g
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               114567  2 -    171031 ---------------------------T-----T
i Cacajao_ayresi.k141_724503                            I 2 C 0
s Cacajao_calvus.k141_96166                                 13596  2 +    125063 ---------------------------T-----T
i Cacajao_calvus.k141_96166                             I 2 C 0
s Cacajao_hosomi.k141_303789                                15639  2 -    216513 ---------------------------T-----T
i Cacajao_hosomi.k141_303789                            I 2 C 0
s Cacajao_melanocephalus.k141_1160263                        8182  2 -    134917 ---------------------------T-----T
i Cacajao_melanocephalus.k141_1160263                   I 2 C 0
s Camelus_bactrianus.KN276303.1                           3220096  6 -   8989139 aa----------a--c----------a------a
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           397797  6 -  15254737 aa----------a--c----------a------a
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2973533  6 +   6889770 aa----------a--c----------a------a
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11520000  6 +  39901454 AA----------A--G----------A------T
i CanFam4.chr31                                         I 1 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   15025  6 +     87036 AA----------A--G----------A------T
i Canis_lupus_VD.CanFam_VD_scaffold_16982               I 1 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11266667  6 -  35597290 aa----------a--g----------a------t
i Canis_lupus_dingo.QKWQ01001993.1                      I 1 C 0
s Canis_lupus_familiaris.chr31                           11089201  6 +  39895921 aa----------a--g----------a------t
i Canis_lupus_familiaris.chr31                          I 1 C 0
s Canis_lupus_orion.HG994411.1                           16456216  6 -  44759192 aa----------a--g----------a------t
i Canis_lupus_orion.HG994411.1                          I 1 C 0
s Capra_aegagrus.CM003214.1                              21325724  6 + 157394656 ga----------a--a----------a------g
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135706952  6 - 157403528 ga----------a--a----------a------g
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          309571  7 +    345090 GA----------A--G----------AT-----T
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               60259  3 +     67245 GG----------A---------------------
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   31649  6 +     33760 GA----------A--G----------A------G
i Castor_canadensis.CasCan_scaffold_47037               I 2 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   159412  6 -    276539 GA----------G--A----------A------G
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15787181  6 -  24422027 GA----------A--G----------A------C
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15799117  6 -  24440124 GA----------A--G----------A------C
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       177308  6 +    436027 GA----------A--G----------A------C
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18891409  2 -  29618158 ---------------------------T-----T
i Cebus_albifrons.Contig22                              I 2 C 0
s Cebus_olivaceus.k141_93739                                 8953  2 -     26817 ---------------------------T-----T
i Cebus_olivaceus.k141_93739                            I 2 C 0
s Cebus_unicolor.k141_239009                                13196  2 +     25043 ---------------------------T-----T
i Cebus_unicolor.k141_239009                            I 2 C 0
s Cephalopachus_bancanus.k141_702587                         8595  7 +     21754 GA----------A--G----------AT-----T
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4364415  6 +   7569818 ga----------a--g----------a------t
i Ceratotherium_simum.JH767818.1                        I 1 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         4172  6 -      9338 GA----------A--G----------A------T
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    I 1 C 0
s Cercocebus_atys.KQ010443.1                              6555846  7 +   6739814 ga----------a--a----------at-----t
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      27323  7 +     60454 GA----------A--A----------AT-----T
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          2529  7 -     21101 GA----------A--A----------AT-----T
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         59838  7 -    107033 GA----------A--A----------AT-----T
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        2728  7 -     17608 GA----------A--A----------AT-----T
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          30224  7 +     30494 GA----------A--A----------AT-----T
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          59069  7 -     59240 GA----------A--A----------AT-----T
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          2770  7 +     16677 GA----------A--A----------AT-----T
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           24929  7 +     35983 GA----------A--A----------AT-----T
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11991455  7 +  12117833 GA----------A--A----------AT-----T
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46478215  7 +  46592721 GA----------A--A----------AT-----T
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      41765  7 -     45581 GA----------A--A----------AT-----T
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       2771  7 +     35577 GA----------A--A----------AT-----T
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        2546  7 -     25661 GA----------A--A----------AT-----T
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        2524  7 -     17744 GA----------A--A----------AT-----T
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        22141  7 +     37128 GA----------A--A----------AT-----T
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           3305  6 -      6963 AA----------A--G----------A------A
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           59731  4 -     68416 GA----------A--G------------------
i Cheirogaleus_major.k141_1157592                       C 0 I 5
s Cheirogaleus_medius.k141_133808                            8775  6 +     13308 GA----------A--G----------T------T
i Cheirogaleus_medius.k141_133808                       C 0 I 8
s Cheracebus_lucifer.k141_619653                             6224  2 -     18223 ---------------------------T-----T
i Cheracebus_lucifer.k141_619653                        I 2 C 0
s Cheracebus_lugens.k141_203936                             23242  2 +     25473 ---------------------------T-----T
i Cheracebus_lugens.k141_203936                         I 2 C 0
s Cheracebus_regulus.k141_2128895                           42282  2 +     57117 ---------------------------T-----T
i Cheracebus_regulus.k141_2128895                       I 2 C 0
s Cheracebus_torquatus.k141_315545                          46961  2 +     54541 ---------------------------T-----T
i Cheracebus_torquatus.k141_315545                      I 2 C 0
s Chinchilla_lanigera.JH721867.1                         15962268  6 +  43084221 aa----------a--g----------a------c
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         71768  2 +    196370 ---------------------------T-----T
i Chiropotes_israelita.k141_1189915                     I 2 C 0
s Chiropotes_sagulatus.k141_773804                          15948  2 +     40510 ---------------------------T-----T
i Chiropotes_sagulatus.k141_773804                      I 2 C 0
s Chlorocebus_aethiops.ctg22                             15140134  7 -  15256731 GA----------A--A----------AT-----T
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      34749  7 -     53260 GA----------A--A----------AT-----T
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101145302  7 + 101219884 ga----------a--a----------at-----t
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                16996  6 -     21363 AA----------A--G----------A------A
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           762299  6 +    964067 aa----------a--g----------a------a
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10887066  7 +  10971483 ga----------a--a----------at-----t
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147665231  7 + 156195979 GA----------A--A----------AT-----T
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            17216  7 +     23629 GA----------A--A----------AT-----T
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60614126  6 +  78930452 gg----------g--a----------a------t
i Condylura_cristata.JH655880.1                         C 0 I 1
s Cricetomys_gambianus.CriGam_scaffold_949                 279068  8 -    399297 GA----------ACAG----------C------T
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53029744  7 +  72327488 -A----------TCAG----------C------T
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            52555  6 -     70449 AA----------A--T----------A------T
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 1 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  208958  6 -    956709 GA----------A--G----------A------T
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 31613  6 -     67205 CA----------A--A----------A------A
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                18309  6 +     26546 GA----------A--G----------A------C
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             59401  6 -    236241 GA----------A--G----------A------C
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          184172  6 -   6883506 ag----------a--g----------a------a
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16845600  6 +  31942871 GA----------A--G----------A------T
i Daubentonia_madagascariensis.ctg11                    C 0 I 3
s Delphinapterus_leucas.KZ290064.1                       80037349  6 -  96802777 ga----------a--g----------a------t
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18699538  3 -  18957592 gg----------a---------------------
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 323068  6 +    993696 ga----------a--g----------a------t
i Dicerorhinus_sumatrensis.PEKH010003161.1              I 1 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   3719  6 +    151128 GA----------A--G----------A------T
i Diceros_bicornis.DicBicMic_scaffold_9545              I 1 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   157536  6 +    228994 GA----------A--G----------A------C
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3656898  6 +   4240102 GA----------G--G----------T------A
i Dipodomys_ordii.KN672545.1                            I 32 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 28541  6 +     28912 GA----------G--G----------T------A
i Dipodomys_stephensi.DipSte_scaffold_44365             I 32 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                36625  6 -     73477 GA----------A--G----------A------A
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22999457  6 -  44670279 gg----------a--a----------t------a
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 12786  3 +     24177 gg----------a---------------------
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1491995  2 +   1727528 gA--------------------------------
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 I 2
s Elephantulus_edwardii.JH947210.1                        7816975  6 +  15467074 GA----------A--T----------A------C
i Elephantulus_edwardii.JH947210.1                      C 0 I 2
s Enhydra_lutris.KZ291749.1                              85872729  6 +  99434291 ga----------a--g----------a------t
i Enhydra_lutris.KZ291749.1                             I 1 C 0
s Eptesicus_fuscus.JH977687.1                             4705106  2 +   6522550 GG--------------------------------
i Eptesicus_fuscus.JH977687.1                           C 0 I 6
s Equus_asinus.JREZ01000062.1                             5853516  6 -   7175178 ga----------a--g----------a------t
i Equus_asinus.JREZ01000062.1                           I 1 C 0
s Equus_caballus.CM000402.2                              13352021  6 +  41866177 ga----------a--g----------a------t
i Equus_caballus.CM000402.2                             I 1 C 0
s Equus_przewalskii.ATBW01073585.1                          13510  6 +     92910 ga----------a--g----------a------t
i Equus_przewalskii.ATBW01073585.1                      I 1 C 0
s Erinaceus_europaeus.JH835290.1                         11534798 11 +  16010500 GG----------A--A----------A-GATTAC
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48776184  7 -  48907691 GA----------A--A----------AT-----T
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          315565  6 +    330699 GA----------A--G----------A------T
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             62018  6 +     89355 GA----------A--G----------A------T
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              5776  4 +     13586 GA----------A--T------------------
i Eulemur_albifrons.k141_715837                         C 0 I 1
s Eulemur_collaris.k141_311830                               5706  4 -      6809 GA----------A--T------------------
i Eulemur_collaris.k141_311830                          C 0 I 1
s Eulemur_coronatus.k141_3240342                            12183  4 +     36558 GA----------A--T------------------
i Eulemur_coronatus.k141_3240342                        C 0 I 1
s Eulemur_flavifrons.k141_903901                             8504  4 +     60246 GA----------A--G------------------
i Eulemur_flavifrons.k141_903901                        C 0 I 1
s Eulemur_fulvus.k141_653297                                11981  4 +    109717 GA----------A--T------------------
i Eulemur_fulvus.k141_653297                            C 0 I 1
s Eulemur_macaco.k141_1341545                               16366  4 +     16540 GA----------A--G------------------
i Eulemur_macaco.k141_1341545                           C 0 I 1
s Eulemur_mongoz.k141_825972                                16642  4 +     27497 GA----------A--T------------------
i Eulemur_mongoz.k141_825972                            C 0 I 1
s Eulemur_rubriventer.k141_411740                           19098  4 +     26808 GA----------A--G------------------
i Eulemur_rubriventer.k141_411740                       C 0 I 1
s Eulemur_rufus.k141_1620292                                33837  4 +     46535 GA----------A--T------------------
i Eulemur_rufus.k141_1620292                            C 0 I 1
s Eulemur_sanfordi.k141_186399                              16561  4 -     29447 GA----------A--T------------------
i Eulemur_sanfordi.k141_186399                          C 0 I 1
s Felis_catus.CM001386.2                                129893474  6 - 159252932 ga----------a--g----------a------t
i Felis_catus.CM001386.2                                I 1 C 0
s Felis_catus_fca126.CM031420.1                         129280566  6 - 158578461 ga----------a--g----------a------t
i Felis_catus_fca126.CM031420.1                         I 1 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 21706  6 +     52776 GA----------A--G----------A------T
i Felis_nigripes.FelNig_flattened_line_8080             I 1 C 0
s Galago_moholi.ctg555                                     211629  4 -    847004 GA----------A--G------------------
i Galago_moholi.ctg555                                  C 0 I 1
s Galago_senegalensis.k141_964197                           14003  4 -     43889 GA----------A--G------------------
i Galago_senegalensis.k141_964197                       C 0 I 1
s Galagoides_demidoff.k141_1769638                          11069  4 +     27357 GA----------A--G------------------
i Galagoides_demidoff.k141_1769638                      C 0 I 1
s Galeopterus_variegatus.GalVar_scaffold_354               156837  6 +    324696 GA----------A--G----------A------T
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    181794  6 -    189561 ga----------a--a----------a------g
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           14291  8 -     18683 -A----------A--G-AAT------A------T
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               5903  7 -     14630 GA----------A--A----------AA-----T
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119653003  7 - 195582420 ga----------a--a----------aa-----t
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         2552 13 +     10286 GA----------A--GTTGGGTT---T------T
i Hapalemur_alaotrensis.k141_1280836                    C 0 I 3
s Hapalemur_gilberti.k141_279011                             1029 11 -     11661 GA----------A--GTTGTT-----T------T
i Hapalemur_gilberti.k141_279011                        C 0 I 3
s Hapalemur_griseus.k141_1387522                             6358 11 +     56096 GA----------A--GTTGTT-----T------T
i Hapalemur_griseus.k141_1387522                        C 0 I 3
s Hapalemur_meridionalis.k141_186231                        29609 11 -     42470 GA----------A--GTT-TTT----T------T
i Hapalemur_meridionalis.k141_186231                    C 0 I 3
s Hapalemur_occidentalis.k141_797938                        46232 16 -     54384 GA----------A--GTTGTTTTTTTT------T
i Hapalemur_occidentalis.k141_797938                    C 0 I 3
s Helogale_parvula.HelPar_flattened_line_22962              17753  6 +     53719 GA----------A--G----------A------A
i Helogale_parvula.HelPar_flattened_line_22962          I 1 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                28009  6 -     91191 GA----------A--A----------A------G
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2551632  6 +  31725842 ca----------a--g----------a------c
i Heterocephalus_glaber.JH602058.1                      I 1 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              147655  5 +    277961 -A----------A--G----------A------T
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      278930  2 -    477199 gg--------------------------------
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              8076  3 -      9143 GG----------A---------------------
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      5590  7 -   7690867 GA----------A--A----------AT-----T
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 17830  6 -     67322 GA----------A--G----------A------T
i Hyaena_hyaena.HyaHya_flattened_line_20729             I 1 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19532  8 -    119109 GA----------A--G----------T-G---GC
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_164775                               394  7 -      2073 GA----------A--A----------AT-----T
i Hylobates_abbotti.k141_164775                         C 0 C 0
s Hylobates_agilis.k141_1878600                               631  7 -      1230 GA----------A--A----------AT-----T
i Hylobates_agilis.k141_1878600                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14625284  7 -  25970782 GA----------A--A----------AT-----T
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            2540  7 -      2977 GA----------A--A----------AT-----T
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             34443  7 -     60944 GA----------A--A----------AT-----T
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     6702  6 +     22540 GA----------A--G----------A------A
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7126388  6 +  13083262 Gg----------g--a----------a------t
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_5141390                                   1084  6 -      3181 GA----------A--G----------A------T
i Indri_indri.k141_5141390                              C 0 I 7
s Inia_geoffrensis.IniGeo_flattened_line_66725               9554  6 +     17520 GA----------A--G----------A------T
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8566472  6 +  11848649 GA----------G--G----------C------T
i Jaculus_jaculus.JH725517.1                            I 27 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               24164  3 +     37189 ---------------G----------A------T
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          50799  2 -    147782 ---------------------------T-----T
i Lagothrix_lagothricha.k141_12968                      I 2 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                     863  2 +     26176 gg--------------------------------
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 I 2
s Lemur_catta.scaffold_1                                258407913 14 - 285822530 GA----------A--GTT-TTTGTT-T------T
i Lemur_catta.scaffold_1                                C 0 I 3
s Lepilemur_ankaranensis.k141_884009                        24671  6 +     39228 GA----------A--G----------T------T
i Lepilemur_ankaranensis.k141_884009                    C 0 I 6
s Lepilemur_dorsalis.k141_134267                            54055  6 +     63517 GA----------A--G----------T------T
i Lepilemur_dorsalis.k141_134267                        C 0 I 8
s Lepilemur_ruficaudatus.k141_617879                        79319  6 +    116806 GA----------A--G----------T------T
i Lepilemur_ruficaudatus.k141_617879                    C 0 I 6
s Lepilemur_septentrionalis.k141_578524                     32310  6 -     33031 GA----------A--G----------T------T
i Lepilemur_septentrionalis.k141_578524                 C 0 I 6
s Leptonychotes_weddellii.KB714749.1                      3086518  6 -   3498232 ga----------a--g----------a------t
i Leptonychotes_weddellii.KB714749.1                    I 1 C 0
s Lepus_americanus.LepAme_scaffold_62849                    13804  6 +     22452 TA----------A--G----------G------T
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            136511  6 +   3060487 ga----------a--g----------a------t
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19248940  7 +  19376315 GA----------A--A----------AT-----T
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           11371  6 +     84689 GA----------A--G----------T------T
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3779120  6 +   6799190 GA----------A--G----------T------T
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20595345  6 -  62548349 gg----------a--g----------a------a
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11088657  6 +  39895028 aa----------a--g----------a------t
i Lycaon_pictus.CM007556.1                              I 1 C 0
s Macaca_arctoides.k141_2201161                             20675  7 +     74745 GA----------A--A----------AT-----T
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12707132  7 +  12821369 GA----------A--A----------AT-----T
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                2774  7 -      3136 GA----------A--A----------AT-----T
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           47589  7 +     63263 GA----------A--A----------AT-----T
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                 2297  7 -      2568 GA----------A--A----------AT-----T
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 2882  7 -      7381 GA----------A--A----------AT-----T
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  46099  7 -     79256 GA----------A--A----------AT-----T
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196036206  7 + 196197964 ga----------a--a----------at-----t
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11446376  7 +  11645122 ga----------a--a----------at-----t
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   5046  7 -     46448 GA----------A--A----------AT-----T
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                2720  7 -     13212 GA----------A--A----------AT-----T
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 16399  7 -     55006 GA----------A--A----------AT-----T
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43841515  7 +  43892939 GA----------A--A----------AT-----T
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               17685  7 -     24607 GA----------A--A----------AT-----T
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               5051  7 -     27140 GA----------A--A----------AT-----T
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43438100  7 -  43563597 GA----------A--A----------AT-----T
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4450920  7 -   4543643 GA----------A--A----------AT-----T
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            146601  6 +    252755 ga----------a--g----------a------t
i Manis_javanica.JSZB01003966.1                         I 1 C 0
s Manis_pentadactyla.KN017078.1                             36744  6 +     58827 ga----------a--g----------a------t
i Manis_pentadactyla.KN017078.1                         I 1 C 0
s Marmota_marmota.CZRN01000005.1                         36874207  6 +  64221397 GG----------G--G----------A------T
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             1541  6 -     87323 GA----------A--G----------A------T
i Mellivora_capensis.MelCap_flattened_line_15433        I 1 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               13465  8 +     15977 GA----------ACAG----------A------T
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1047430  7 -  26018355 -A----------TAAG----------C------T
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_227248                    838  6 -      1377 GA----------G--G----------A------T
i Mesoplodon_bidens.MesBid_scaffold_227248              C 0 C 0
s Microcebus_murinus.CM007691.1                          16510943  6 +  47401472 ga----------a--g----------c------t
i Microcebus_murinus.CM007691.1                         C 0 I 8
s Microgale_talazaci.MicTal_scaffold_34660                  35454  6 -     48017 GG----------G--G----------T------A
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               23450  3 -     32043 GG----------A---------------------
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8210608  3 +  10048721 gg----------a---------------------
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            35097  3 +     45743 GG----------A---------------------
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         2649  7 +     29742 GA----------A--A----------AT-----T
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        12034  6 -    104932 GA----------A--G----------A------T
i Mirounga_angustirostris.MirAng_flattened_line_8852    I 1 C 0
s Mirza_zaza.k141_226143                                     6332  6 +      8497 GA----------A--G----------T------A
i Mirza_zaza.k141_226143                                C 0 I 8
s Monodon_monoceros.MonMon_M_scaffold_5598                 146939  6 +    154973 GA----------A--G----------A------T
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                161970  3 +    265003 GG----------A---------------------
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  2025  6 -     19904 GA----------A--A----------A------G
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  145448  6 -    168139 GA----------A--G----------A------C
i Mungos_mungo.MunMun_flattened_line_8729               I 1 C 0
s Murina_feae.MurFea_scaffold_2254                          20071  3 -    100666 GG----------A---------------------
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70767066 18 +  92629107 AAACACATTAgaacac----------a------t
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75490126 18 +  98207768 GAACACATTAGAACAC----------A------T
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67556364  8 +  89017189 ga----------acac----------a------t
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74331301 18 +  97876770 GAACACATTAgaacac----------a------t
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             12573  5 +     98495 -A----------A--G----------A------T
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4424910  6 -  28371801 ga----------a--g----------a------t
i Mustela_putorius.JH417978.1                           I 1 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     90652  6 -    117718 GA----------A--G----------A------A
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               968600  3 +   8389877 GG----------a---------------------
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5020275  3 +   6462685 Gg----------a---------------------
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3466184  3 -   3747815 GG----------A---------------------
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        11394  3 +     66751 GG----------A---------------------
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             5562  8 -      8794 AA----------G--G----------A--A--AA
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nasalis_larvatus.k141_153429                               9156  7 +     48152 GA----------A--A----------AT-----T
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4485424  6 -  14209539 ga----------a--g----------a------t
i Neomonachus_schauinslandi.NINY01007774.1              I 1 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3951551  6 -   4490290 ga----------a--g----------a------t
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Nomascus_annamensis.k141_720788                             538  7 -      1065 GA----------A--A----------AT-----T
i Nomascus_annamensis.k141_720788                       C 0 C 0
s Nomascus_concolor.k141_71494                                160  7 -      1630 GA----------A--A----------AT-----T
i Nomascus_concolor.k141_71494                          n 7 n 7
s Nomascus_gabriellae.k141_1004198                            409  7 +      1448 GA----------A--A----------AT-----T
i Nomascus_gabriellae.k141_1004198                      C 0 C 0
s Nomascus_siki_b.tarseq_80                             25560  7 -  18771707 GA----------A--A----------AT-----T
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  3263  7 +      4512 GA----------A--A----------AT-----T
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                31458  6 +   3668941 aa----------a--t----------a------t
i Nyctereutes_procyonoides.CAJHUB010000786.1            I 1 C 0
s Nycticebus_bengalensis.LG16                            65567825  6 -  95554990 GA----------A--G----------T------T
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            4551  6 +      6470 GA----------A--G----------T------T
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65670160  6 +  89412551 GA----------A--G----------T------T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4996551  6 -  23139505 GA----------A--C----------T------T
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3686435  6 +  10294119 ga----------c--a----------a------a
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             680091  6 -   3126709 ga----------a--g----------a------t
i Odobenus_rosmarus.KB229369.1                          I 1 C 0
s Odocoileus_virginianus.KZ101650.1                       1080208  6 +   1425656 GA----------A--A----------A------G
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         37522  6 +     78940 ga----------a--a----------a------g
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  37621  7 +     62360 -A----------TCAG----------C------T
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7225236  6 -   7562323 ga----------a--g----------a------t
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              58569  6 -     66828 GA----------A--G----------G------T
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141876838  6 + 163896628 ta----------a--g----------g------t
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      308742  6 -    505867 aa----------a--g----------a------t
i Otocyon_megalotis.JAEUCK010005121.1                   I 1 C 0
s Otolemur_crassicaudatus.k141_505435                        1444  4 -     53940 GA----------A--G------------------
i Otolemur_crassicaudatus.k141_505435                   C 0 I 1
s Otolemur_garnettii.GL873528.1                          18009424  4 -  38779656 ga----------a--g------------------
i Otolemur_garnettii.GL873528.1                         C 0 I 2
s Ovis_aries.CM001582.2                                 134077800  6 - 275406953 ga----------a--a----------a------g
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      79015  6 +    140051 GA----------A--A----------A------G
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.AJFE02002857.1                                 954  7 -      1091 ga----------a--a----------at-----t
i Pan_paniscus.AJFE02002857.1                           I 25 I 10
s Pan_troglodytes.KZ622857.1                               328121  7 +    772158 ga----------a--a----------at-----t
i Pan_troglodytes.KZ622857.1                            I 266 I 10
s Panthera_onca.PanOnc_flattened_line_1615                  34844  6 +    295523 GA----------A--G----------A------T
i Panthera_onca.PanOnc_flattened_line_1615              I 1 C 0
s Panthera_pardus.KV860323.1                              3638578  6 +  18214204 ga----------a--g----------a------t
i Panthera_pardus.KV860323.1                            I 1 C 0
s Panthera_tigris.KE721879.1                              5028253  6 -   6340057 ga----------a--g----------a------t
i Panthera_tigris.KE721879.1                            I 1 C 0
s Pantholops_hodgsonii.KE114631.1                         1066650  6 -   1292953 GA----------G--A----------A------G
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188156887  7 - 188283584 ga----------a--a----------at-----t
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             5204  7 +      5367 GA----------A--A----------AT-----T
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47514272  7 +  47705337 GA----------A--A----------AT-----T
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 68248  7 -    104429 GA----------A--A----------AT-----T
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    6784  7 +     14967 GA----------A--A----------AT-----T
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 2643  7 -      7628 GA----------A--A----------AT-----T
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    116335  6 -    135482 GA----------A--G----------A------T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 I 1 C 0
s Perodicticus_ibeanus.k141_117958                           6129  6 -     23713 GA----------A--G----------T------T
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            25443  6 -     27972 GA----------A--G----------T------T
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359        580  6 +     49596 ga----------g--g----------t------a
i Perognathus_longimembris.PerPac_flattened_line_19359  I 226 C 0
s Peromyscus_maniculatus.KI615518.1                       4950868  7 -   8017169 -A----------TCAG----------C------G
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    14161  6 -     36578 GT----------A--G----------A------C
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            121840  6 -    122454 GA----------A--G----------A------T
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1987485                           2670  7 -      5908 GA----------A--A----------AT-----T
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       3294  7 -     17985 GA----------A--A----------AT-----T
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            2661  7 +      7694 GA----------A--A----------AT-----T
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26741139  7 +  26888534 ga----------a--a----------at-----t
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pithecia_albicans.k141_991845                             44405  2 -     61926 ---------------------------T-----T
i Pithecia_albicans.k141_991845                         I 2 C 0
s Pithecia_chrysocephala.k141_159118                        25790  2 +     78826 ---------------------------T-----T
i Pithecia_chrysocephala.k141_159118                    I 2 C 0
s Pithecia_hirsuta.k141_1152968                              9837  2 -     15800 ---------------------------T-----T
i Pithecia_hirsuta.k141_1152968                         I 2 C 0
s Pithecia_mittermeieri.k141_2119203                        13036  2 -     16101 ---------------------------T-----T
i Pithecia_mittermeieri.k141_2119203                    I 2 C 0
s Pithecia_pissinattii.k141_1102319                          6264  2 +      9673 ---------------------------T-----T
i Pithecia_pissinattii.k141_1102319                     I 2 C 0
s Pithecia_pithecia.tarseq_313                           13475264  2 -  19735023 ---------------------------T-----T
i Pithecia_pithecia.tarseq_313                          I 2 C 0
s Pithecia_vanzolinii.k141_831006                           14167  2 -     31692 ---------------------------T-----T
i Pithecia_vanzolinii.k141_831006                       I 2 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            98451  2 +    112873 GG--------------------------------
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 I 6
s Platanista_gangetica.PlaMin_flattened_line_72990           5927  6 +     21690 GA----------A--G----------A------T
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       23507  2 +     44506 ---------------------------T-----T
i Plecturocebus_bernhardi.k141_959214                   I 2 C 0
s Plecturocebus_brunneus.k141_498086                        23719  2 +     67491 ---------------------------T-----T
i Plecturocebus_brunneus.k141_498086                    I 2 C 0
s Plecturocebus_caligatus.k141_2539816                      13959  2 -     98129 ---------------------------T-----T
i Plecturocebus_caligatus.k141_2539816                  I 2 C 0
s Plecturocebus_cinerascens.k141_744510                     23559  2 +    147771 ---------------------------T-----T
i Plecturocebus_cinerascens.k141_744510                 I 2 C 0
s Plecturocebus_cupreus.k141_1145860                          195  2 -     43940 ---------------------------T-----T
i Plecturocebus_cupreus.k141_1145860                    I 2 C 0
s Plecturocebus_dubius.k141_3565563                          4278  2 -     55515 ---------------------------T-----T
i Plecturocebus_dubius.k141_3565563                     I 2 C 0
s Plecturocebus_grovesi.k141_242819                         23632  2 +    152463 ---------------------------T-----T
i Plecturocebus_grovesi.k141_242819                     I 2 C 0
s Plecturocebus_hoffmannsi.k141_985533                       1349  2 -    119457 ---------------------------T-----T
i Plecturocebus_hoffmannsi.k141_985533                  I 2 C 0
s Plecturocebus_miltoni.k141_841561                         13355  2 +    134592 ---------------------------T-----T
i Plecturocebus_miltoni.k141_841561                     I 2 C 0
s Plecturocebus_moloch.k141_890597                          23942  2 -     75465 ---------------------------T-----T
i Plecturocebus_moloch.k141_890597                      I 2 C 0
s Pongo_abelii.NDHI03003816.1                              187789  7 -    373494 ga----------a--a----------at-----t
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19808437  7 +  19899266 GA----------A--A----------AT-----T
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               6400  7 -     15069 GA----------A--A----------AT-----T
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              6530  7 +     14865 GA----------A--A----------AT-----T
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6849286  4 +  12164890 ga----------a--g------------------
i Prolemur_simus.MPIZ01000048.1                         C 0 I 7
s Propithecus_coquerelli.NW_012147863.1                     19447  6 -     30946 nn----------n--n----------n------n
i Propithecus_coquerelli.NW_012147863.1                 C 0 I 14
s Propithecus_coronatus.k141_1353159                         4366  6 +     11805 GA----------A--G----------A------T
i Propithecus_coronatus.k141_1353159                    C 0 I 11
s Propithecus_diadema.k141_577245                           43709  6 +     52369 GA----------A--G----------A------T
i Propithecus_diadema.k141_577245                       C 0 I 5
s Propithecus_edwardsi.k141_1317105                         36096  6 -     44753 GA----------A--G----------A------T
i Propithecus_edwardsi.k141_1317105                     C 0 I 5
s Propithecus_perrieri.k141_7554                            18020  6 +     27322 GA----------A--G----------A------T
i Propithecus_perrieri.k141_7554                        C 0 I 4
s Propithecus_tattersalli.k141_907138                       17653  6 -     53241 GA----------A--G----------A------T
i Propithecus_tattersalli.k141_907138                   C 0 I 5
s Propithecus_verreauxi.k141_158021                         39917  6 -     48185 GA----------A--G----------A------T
i Propithecus_verreauxi.k141_158021                     C 0 I 9
s Psammomys_obesus.NESX01026517.1                           35748  8 +     77221 GA----------Acag----------a------t
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            4610  3 -     27784 gg----------a---------------------
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        247220  6 -    344369 GA----------A--G----------A------T
i Pteronura_brasiliensis.PteBra_flattened_line_1343     I 1 C 0
s Pteropus_alecto.KB031157.1                             13246523  3 -  17261082 gg----------a---------------------
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             604474  3 -   3946241 gg----------a---------------------
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131534858  6 - 161321710 ga----------a--g----------a------t
i Puma_concolor.QAVW01000427.1                          I 1 C 0
s Pygathrix_cinerea.k141_374971                             30521  7 +     56732 GA----------A--A----------AT-----T
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6807009  7 +   6970761 GA----------A--A----------AT-----T
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             6400  7 +     18040 GA----------A--A----------AT-----T
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                16322  6 +     68503 GA----------A--A----------A------G
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1788352  3 +   2252614 GG----------a---------------------
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                             810  7 -     17045 GA----------A--A----------AT-----T
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206378287  7 - 206558726 GA----------A--A----------AT-----T
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44857201  7 -  45163003 GA----------A--A----------AT-----T
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                19852  3 +    109198 GA----------A---------------------
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       8475  6 +     12214 GA----------A--A----------A------G
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Sapajus_apella.ctg10                                   17341954  2 -  30362882 ---------------------------T-----T
i Sapajus_apella.ctg10                                  I 2 C 0
s Sapajus_macrocephalus.k141_966464                         21315  2 -     62485 ---------------------------T-----T
i Sapajus_macrocephalus.k141_966464                     I 2 C 0
s Saimiri_boliviensis.NW_024100938.1                     15673362  2 -  43202129 GA--------------------------------
i Saimiri_boliviensis.NW_024100938.1                    C 0 I 2
s Saimiri_cassiquiarensis.k141_808270                        5275  2 +     34089 GA--------------------------------
i Saimiri_cassiquiarensis.k141_808270                   C 0 I 2
s Saimiri_macrodon.k141_2087127                              5217  2 -     60842 GA--------------------------------
i Saimiri_macrodon.k141_2087127                         C 0 I 2
s Saimiri_oerstedii.k141_841116                              5310  2 +     67014 GA--------------------------------
i Saimiri_oerstedii.k141_841116                         C 0 I 2
s Saimiri_sciureus.k141_1947592                              5288  2 +     60816 GA--------------------------------
i Saimiri_sciureus.k141_1947592                         C 0 I 2
s Saimiri_ustus.k141_1282476                                 5225  2 -     76454 GA--------------------------------
i Saimiri_ustus.k141_1282476                            C 0 I 2
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   32808  6 -    114521 GG----------C--A----------A------T
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 I 1
s Semnopithecus_entellus.k141_1572367                        4013  7 +     15331 GA----------A--A----------AT-----T
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       9406  7 +     20762 GA----------A--A----------AT-----T
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         119409  7 +    130994 GA----------A--A----------AT-----T
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           38195  7 +     46263 GA----------A--A----------AT-----T
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     31315  7 +     42640 GA----------A--A----------AT-----T
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        14355  7 +     30600 GA----------A--A----------AT-----T
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  100806  7 -    120886 -A----------TCAG----------C------T
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            19415  6 +    739146 AA----------A--T----------A------C
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17766989  6 -  27805282 gg----------g--a----------a------g
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2240304  6 +   2842873 Gg----------g--a----------a------t
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             235338  6 -    276980 GA----------A--G----------A------T
i Spilogale_gracilis.SpiGra_flattened_line_905          I 1 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            28108  6 +     62062 GA----------A--G----------A------C
i Suricata_suricatta.SurSur_flattened_line_20339        I 1 C 0
s Sus_scrofa.CM000824.4                                 189272632  6 + 218635234 ga----------g--a----------a------g
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        15545  7 -  13920577 GA----------A--A----------AT-----T
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                 790  3 +     20549 GG----------A---------------------
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               15228  8 +     45698 AA----------G--G----------A--A--AA
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      807657  6 +   1148477 AA----------A--G----------A------T
i Tapirus_indicus.TapInd_scaffold_176                   I 1 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  58368  6 +     99546 AA----------A--G----------A------T
i Tapirus_terrestris.TapTer_scaffold_14939              I 1 C 0
s Tarsius_lariang.k141_609102                               27024  7 +     42269 GA----------A--G----------AT-----T
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               60340  7 +     65473 GA----------A--G----------AT-----T
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194008409  7 - 194193292 ga----------a--a----------at-----t
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             39386  6 -     47444 GA----------A--G----------A------C
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  6044  1 +      6782 A---------------------------------
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  136607  3 -    259118 GG----------A---------------------
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        27511  7 +     38948 GA----------A--A----------AT-----T
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   21243  7 -     32910 GA----------A--A----------AT-----T
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      2629  7 -     12939 GA----------A--A----------AT-----T
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       2565  7 -     14244 GA----------A--C----------AT-----T
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           43964  7 -     54611 GA----------A--A----------AT-----T
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        1767  7 -     11566 GA----------A--A----------AT-----T
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     3944  7 -     15592 GA----------A--A----------AT-----T
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          2600  7 +     14371 GA----------A--A----------AT-----T
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                    881  7 +     12481 GA----------A--C----------AT-----T
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                         757  7 -     24393 GA----------A--A----------AT-----T
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       6003  7 -     28054 GA----------A--A----------AT-----T
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44660803  7 -  44834318 GA----------A--A----------AT-----T
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       3111  7 +     13828 GA----------A--A----------AT-----T
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   5685  6 +     90398 GA----------A--A----------A------G
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16085866  6 +  31416278 ga----------a--g----------a------a
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2793649  6 -   3938065 GA----------A--G----------A------T
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    5835  6 +     13056 GA----------A--G----------A------T
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69313952  6 -  96451834 ga----------a--g----------a------t
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   1855  3 +     10241 GG----------A---------------------
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6515348  6 +  28682327 ga----------a--g----------a------t
i Ursus_maritimus.KK498671.1                            I 1 C 0
s Varecia_rubra.k141_432109                                  5910  6 -     20643 GA----------A--G----------T------T
i Varecia_rubra.k141_432109                             I 93 I 3
s Varecia_variegata.k141_775891                             25451  6 -     33872 GA----------A--G----------T------T
i Varecia_variegata.k141_775891                         I 93 I 3
s Vicugna_pacos.KN269600.1                                1525201  6 -   2331223 aa----------a--c----------a------a
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                138838  6 -    281493 AA----------A--G----------A------T
i Vulpes_lagopus.VulLag_flattened_line_2045             I 1 C 0
s Xerus_inauris.XerIna_scaffold_7898                       127420  6 -    134049 GA----------G--G----------A------T
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        214818  6 -    227762 GA----------A--G----------A------T
i Zalophus_californianus.ZalCal_flattened_line_4097     I 1 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     16368  6 -     20485 AA----------G--G----------T------C
i Zapus_hudsonius.ZapHud_scaffold_64392                 I 23 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           7451  6 -      8775 GA----------A--G----------A------T
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                701732 90 +    802869 I
e Procavia_capensis.ProCapCap_scaffold_149274                2467 1156 -      9567 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Megaderma_lyra.MegLyr_scaffold_3562                       64783 239 -    234502 I
e Heterohyrax_brucei.HetBruBak_scaffold_25354               61360 1157 +     73687 I
e Crocidura_indochinensis.CroInd_scaffold_848148              199  0 +      1327 C
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1008 325 -      5782 I
e Hylobates_klossii.k141_285563                               343 193 +      1026 I
e Microtus_ochrogaster.CM001673.1                        22820341  4 -  98408828 I
e Rattus_norvegicus.chr11                                13915860 1475 +  90463843 I
e Ondatra_zibethicus.OndZib_scaffold_6821                  125594  4 +    145789 I
e Nannospalax_galili.KL201303.1                            119159  6 +    362372 I
e Graphiurus_murinus.GraMur_scaffold_4493                   77863  0 +    118900 C
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I
e Ellobius_talpinus.LOJH01090055.1                           7151  4 -      7838 I
e Ellobius_lutescens.LOEQ01003611.1                        240029  1 -    369425 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               12392 3 +    209709 TT---T
s Acinonyx_jubatus.LLWD01000356.1                         2034525 6 +   3721120 tttctt
i Acinonyx_jubatus.LLWD01000356.1                       C 0 I 1
s Acomys_cahirinus.AcoCah_scaffold_1625                    113087 3 -    189883 gt---a
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10657861 3 +  23371972 tt---t
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 I 2
s Ailurus_fulgens.LNAC01000003.1                          7095209 3 -  16596857 tt---t
i Ailurus_fulgens.LNAC01000003.1                        C 0 I 4
s Allactaga_bullata.AllBul_scaffold_70162                   17465 3 -     22067 AT---T
i Allactaga_bullata.AllBul_scaffold_70162               C 0 I 1
s Allenopithecus_nigroviridis.k141_2469532                   1907 3 -     60446 TT---T
i Allenopithecus_nigroviridis.k141_2469532              C 0 I 2
s Allochrocebus_lhoesti.k141_3566948                         2627 3 -     29318 TT---T
i Allochrocebus_lhoesti.k141_3566948                    C 0 I 2
s Allochrocebus_preussi.k141_1108977                         1562 3 +     38766 TT---T
i Allochrocebus_preussi.k141_1108977                    C 0 I 2
s Allochrocebus_solatus.k141_371672                          2521 3 -     80423 TT---T
i Allochrocebus_solatus.k141_371672                     C 0 I 2
s Alouatta_belzebul.k141_1818029                            10821 3 -     18050 TT---T
i Alouatta_belzebul.k141_1818029                        C 0 I 2
s Alouatta_caraya.k141_1710068                                536 3 +      1555 TT---T
i Alouatta_caraya.k141_1710068                          C 0 I 2
s Alouatta_discolor.k141_811576                             11494 3 -     21359 TT---T
i Alouatta_discolor.k141_811576                         C 0 I 2
s Alouatta_juara.k141_1244470                                1115 3 +      2129 TT---T
i Alouatta_juara.k141_1244470                           C 0 I 2
s Alouatta_macconnelli.k141_2177643                           499 3 -      1868 TT---T
i Alouatta_macconnelli.k141_2177643                     C 0 I 2
s Alouatta_nigerrima.k141_3537692                             548 3 +      1660 TT---T
i Alouatta_nigerrima.k141_3537692                       C 0 I 2
s Alouatta_palliata.k141_2764429                              463 3 -      1480 TT---T
i Alouatta_palliata.k141_2764429                        C 0 I 2
s Alouatta_puruensis.k141_1284840                            4541 3 -      4927 TT---T
i Alouatta_puruensis.k141_1284840                       C 0 I 2
s Alouatta_seniculus.k141_1531728                             678 3 -      1692 TT---T
i Alouatta_seniculus.k141_1531728                       C 0 I 2
s Ammotragus_lervia.NIVO01013474.1                        3520655 2 +   4113121 at----
i Ammotragus_lervia.NIVO01013474.1                      C 0 I 5
s Anoura_caudifer.AnoCau_scaffold_422                      391062 2 -    631301 AG----
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 I 2
s Antilocapra_americana.AntAmePen_scaffold_42841            31237 2 +     33004 AT----
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 I 5
s Aotus_azarae.k141_3170768                                 63173 3 +     78111 TT---T
i Aotus_azarae.k141_3170768                             I 2 I 2
s Aotus_griseimembra.k141_3275623                            6115 3 +     22701 TT---T
i Aotus_griseimembra.k141_3275623                       I 2 I 2
s Aotus_nancymaae.KZ196176.1                              5750072 3 +   9889416 TT---T
i Aotus_nancymaae.KZ196176.1                            I 2 I 2
s Aotus_trivirgatus.k141_1740727                             6661 3 -    104377 TT---T
i Aotus_trivirgatus.k141_1740727                        I 2 I 2
s Aotus_vociferans.k141_718647                               6663 3 +     23246 TT---T
i Aotus_vociferans.k141_718647                          I 2 I 2
s Aplodontia_rufa.AprRuf_scaffold_156013                     4215 3 +      5067 TA---A
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 I 2
s Arctocebus_calabarensis.k141_587554                        1728 3 +      9265 TT---T
i Arctocebus_calabarensis.k141_587554                   C 0 I 1
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 9479 3 -     29036 AG---T
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 I 2
s Ateles_geoffroyi_b.tarseq_2582                             9539932 3 +  39197703 TT---T
i Ateles_geoffroyi_b.tarseq_2582                           C 0 I 2
s Ateles_belzebuth.k141_1348307                             61203 3 +     85812 TT---T
i Ateles_belzebuth.k141_1348307                         C 0 I 2
s Ateles_chamek.k141_1072810                                12216 3 +     89302 TT---T
i Ateles_chamek.k141_1072810                            C 0 I 2
s Ateles_geoffroyi_a.k141_1300742                             16719 3 -     58268 TT---T
i Ateles_geoffroyi_a.k141_1300742                         C 0 I 2
s Ateles_marginatus.k141_899112                             64711 3 +    119057 TT---T
i Ateles_marginatus.k141_899112                         C 0 I 2
s Ateles_paniscus.k141_1631200                               6682 3 -     25888 TT---T
i Ateles_paniscus.k141_1631200                          C 0 I 2
s Avahi_laniger.k141_2840928                                 7465 2 -     16375 -T---A
i Avahi_laniger.k141_2840928                            I 8 I 1
s Avahi_peyrierasi.k141_798820                               1083 2 +      6337 -T---A
i Avahi_peyrierasi.k141_798820                          I 8 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26380731 3 +  51448160 tt---a
i Balaenoptera_acutorostrata.KI537095.1                 C 0 I 2
s Balaenoptera_bonaerensis.DF502048.1                        5903 3 -     13118 tt---a
i Balaenoptera_bonaerensis.DF502048.1                   C 0 I 2
s Beatragus_hunteri.BeaHun_scaffold_21644                   43765 2 -     72089 AT----
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 I 5
s Bison_bison.KN264915.1                                  6560385 2 +   6870073 at----
i Bison_bison.KN264915.1                                C 0 I 1
s Bos_indicus.CM003021.1                                138140496 2 - 161108492 at----
i Bos_indicus.CM003021.1                                C 0 I 5
s Bos_mutus.JH883513.1                                     573037 2 -    998990 at----
i Bos_mutus.JH883513.1                                  C 0 I 5
s Bos_taurus.CM000177.6                                 136296229 2 - 158972876 at----
i Bos_taurus.CM000177.6                                 C 0 I 5
s Bubalus_bubalis.KI419065.1                              1233309 2 -   1914593 at----
i Bubalus_bubalis.KI419065.1                            C 0 I 5
s Cacajao_ayresi.k141_724503                               114569 3 -    171031 TT---T
i Cacajao_ayresi.k141_724503                            C 0 I 2
s Cacajao_calvus.k141_96166                                 13598 3 +    125063 TT---T
i Cacajao_calvus.k141_96166                             C 0 I 2
s Cacajao_hosomi.k141_303789                                15641 3 -    216513 TT---T
i Cacajao_hosomi.k141_303789                            C 0 I 2
s Cacajao_melanocephalus.k141_1160263                        8184 3 -    134917 TT---T
i Cacajao_melanocephalus.k141_1160263                   C 0 I 2
s Camelus_bactrianus.KN276303.1                           3220102 3 -   8989139 tt---t
i Camelus_bactrianus.KN276303.1                         C 0 I 2
s Camelus_dromedarius.KN271192.1                           397803 3 -  15254737 tt---t
i Camelus_dromedarius.KN271192.1                        C 0 I 2
s Camelus_ferus.KB016973.1                                2973539 3 +   6889770 tt---t
i Camelus_ferus.KB016973.1                              C 0 I 2
s CanFam4.chr31                                          11520006 3 +  39901454 TT---T
i CanFam4.chr31                                         C 0 I 1
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   15031 3 +     87036 TT---T
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 I 1
s Canis_lupus_dingo.QKWQ01001993.1                       11266673 3 -  35597290 tt---t
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 I 1
s Canis_lupus_familiaris.chr31                           11089207 3 +  39895921 tt---t
i Canis_lupus_familiaris.chr31                          C 0 I 1
s Canis_lupus_orion.HG994411.1                           16456222 3 -  44759192 tt---t
i Canis_lupus_orion.HG994411.1                          C 0 I 1
s Capra_aegagrus.CM003214.1                              21325730 2 + 157394656 at----
i Capra_aegagrus.CM003214.1                             C 0 I 5
s Capra_hircus.CM004562.1                               135706958 2 - 157403528 at----
i Capra_hircus.CM004562.1                               C 0 I 5
s Carlito_syrichta.NW_007248099.1                          309578 3 +    345090 TT---T
i Carlito_syrichta.NW_007248099.1                       C 0 I 1
s Carollia_perspicillata.CarPer_scaffold_4436               60262 3 +     67245 AG---T
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 I 2
s Cavia_aperea.AVPZ01000278.1                            15787187 1 -  24422027 -----T
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15799123 1 -  24440124 -----T
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       177314 1 +    436027 -----T
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   31655 2 +     33760 GT----
i Castor_canadensis.CasCan_scaffold_47037               C 0 I 2
s Catagonus_wagneri.CatWag_scaffold_1305                   159418 2 -    276539 AT----
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 I 1
s Cebus_albifrons.Contig22                               18891411 3 -  29618158 AT---T
i Cebus_albifrons.Contig22                              C 0 I 2
s Cebus_olivaceus.k141_93739                                 8955 3 -     26817 AT---T
i Cebus_olivaceus.k141_93739                            C 0 I 2
s Cebus_unicolor.k141_239009                                13198 3 +     25043 AT---T
i Cebus_unicolor.k141_239009                            C 0 I 2
s Cephalopachus_bancanus.k141_702587                         8602 3 +     21754 TT---T
i Cephalopachus_bancanus.k141_702587                    C 0 I 1
s Ceratotherium_simum.JH767818.1                          4364421 3 +   7569818 tt---t
i Ceratotherium_simum.JH767818.1                        C 0 I 6
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         4178 3 -      9338 TT---T
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 I 6
s Cercocebus_atys.KQ010443.1                              6555853 3 +   6739814 tt---t
i Cercocebus_atys.KQ010443.1                            C 0 I 2
s Cercocebus_chrysogaster.k141_2328246                      27330 3 +     60454 TT---T
i Cercocebus_chrysogaster.k141_2328246                  C 0 I 2
s Cercocebus_lunulatus.k141_4634644                          2536 3 -     21101 TT---T
i Cercocebus_lunulatus.k141_4634644                     C 0 I 2
s Cercocebus_torquatus.k141_3969582                         59845 3 -    107033 TT---T
i Cercocebus_torquatus.k141_3969582                     C 0 I 2
s Cercopithecus_ascanius.k141_4123525                        2735 3 -     17608 TT---T
i Cercopithecus_ascanius.k141_4123525                   C 0 I 2
s Cercopithecus_cephus.k141_598190                          30231 3 +     30494 TT---T
i Cercopithecus_cephus.k141_598190                      C 0 I 2
s Cercopithecus_diana.k141_2980617                          59076 3 -     59240 TT---T
i Cercopithecus_diana.k141_2980617                      C 0 I 2
s Cercopithecus_hamlyni.k141_129805                          2777 3 +     16677 TT---T
i Cercopithecus_hamlyni.k141_129805                     C 0 I 2
s Cercopithecus_lowei.k141_623764                           24936 3 +     35983 TT---T
i Cercopithecus_lowei.k141_623764                       C 0 I 2
s Cercopithecus_albogularis.ctg51                              11991462 3 +  12117833 TT---T
i Cercopithecus_albogularis.ctg51                             C 0 I 2
s Cercopithecus_mona.ctg12                               46478222 3 +  46592721 TT---T
i Cercopithecus_mona.ctg12                              C 0 I 2
s Cercopithecus_neglectus.k141_2078027                      41772 3 -     45581 TT---T
i Cercopithecus_neglectus.k141_2078027                  C 0 I 2
s Cercopithecus_nictitans.k141_1129315                       2778 3 +     35577 TT---T
i Cercopithecus_nictitans.k141_1129315                  C 0 I 2
s Cercopithecus_petaurista.k141_64532                        2553 3 -     25661 TT---T
i Cercopithecus_petaurista.k141_64532                   C 0 I 2
s Cercopithecus_pogonias.k141_3109732                        2531 3 -     17744 TT---T
i Cercopithecus_pogonias.k141_3109732                   C 0 I 2
s Cercopithecus_roloway.k141_2263608                        22148 3 +     37128 TT---T
i Cercopithecus_roloway.k141_2263608                    C 0 I 2
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           3311 3 -      6963 TT---G
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           59740 3 -     68416 AA---A
i Cheirogaleus_major.k141_1157592                       I 5 C 0
s Cheirogaleus_medius.k141_133808                            8789 2 +     13308 -A---A
i Cheirogaleus_medius.k141_133808                       I 8 C 0
s Cheracebus_lucifer.k141_619653                             6226 3 -     18223 TT---T
i Cheracebus_lucifer.k141_619653                        C 0 I 2
s Cheracebus_lugens.k141_203936                             23244 3 +     25473 TT---T
i Cheracebus_lugens.k141_203936                         C 0 I 2
s Cheracebus_regulus.k141_2128895                           42284 3 +     57117 TT---T
i Cheracebus_regulus.k141_2128895                       C 0 I 2
s Cheracebus_torquatus.k141_315545                          46963 3 +     54541 TT---T
i Cheracebus_torquatus.k141_315545                      C 0 I 2
s Chinchilla_lanigera.JH721867.1                         15962274 1 +  43084221 -----t
i Chinchilla_lanigera.JH721867.1                        C 0 I 2
s Chiropotes_israelita.k141_1189915                         71770 3 +    196370 TT---T
i Chiropotes_israelita.k141_1189915                     C 0 I 2
s Chiropotes_sagulatus.k141_773804                          15950 3 +     40510 TT---T
i Chiropotes_sagulatus.k141_773804                      C 0 I 2
s Chlorocebus_aethiops.ctg22                             15140141 3 -  15256731 TT---T
i Chlorocebus_aethiops.ctg22                            C 0 I 2
s Chlorocebus_pygerythrus.k141_1486215                      34756 3 -     53260 TT---T
i Chlorocebus_pygerythrus.k141_1486215                  C 0 I 2
s Chlorocebus_sabaeus.CM001963.2                        101145309 3 + 101219884 tt---t
i Chlorocebus_sabaeus.CM001963.2                        C 0 I 2
s Choloepus_didactylus.ChoDid_scaffold_36182                17002 3 -     21363 CT---T
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 I 1
s Choloepus_hoffmanni.KN194586.1                           762305 3 +    964067 ct---t
i Choloepus_hoffmanni.KN194586.1                        C 0 I 3
s Colobus_angolensis.KN985967.1                          10887073 3 +  10971483 tt---t
i Colobus_angolensis.KN985967.1                         C 0 I 2
s Colobus_guereza.LG08                                  147665238 3 + 156195979 TT---T
i Colobus_guereza.LG08                                  C 0 I 2
s Colobus_polykomos.k141_1406057                            17223 3 +     23629 TT---T
i Colobus_polykomos.k141_1406057                        C 0 I 2
s Condylura_cristata.JH655880.1                          60614133 3 +  78930452 tt---c
i Condylura_cristata.JH655880.1                         I 1 I 2
s Cricetomys_gambianus.CriGam_scaffold_949                 279076 3 -    399297 TT---A
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 I 2
s Cricetulus_griseus.LT883672.1                          53029751 3 +  72327488 CT---G
i Cricetulus_griseus.LT883672.1                         C 0 I 2
s Cryptoprocta_ferox.CryFer_flattened_line_19014            52561 6 -     70449 TTTCTT
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 I 1
s Ctenodactylus_gundi.CteGun_scaffold_447                  208964 3 -    956709 GT---T
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 I 2
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 31619 1 -     67205 -----T
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 I 2
s Cuniculus_paca.CunPac_flattened_line_16637                18315 1 +     26546 -----T
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 I 2
s Dasyprocta_punctata.DasPun_flattened_line_634             59407 1 -    236241 -----T
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 I 2
s Dasypus_novemcinctus.JH568778.1                          184178 3 -   6883506 tt---t
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16845609 3 +  31942871 TT---T
i Daubentonia_madagascariensis.ctg11                    I 3 I 1
s Delphinapterus_leucas.KZ290064.1                       80037355 3 -  96802777 tt---a
i Delphinapterus_leucas.KZ290064.1                      C 0 I 2
s Desmodus_rotundus.KZ672188.1                           18699541 3 -  18957592 ag---g
i Desmodus_rotundus.KZ672188.1                          C 0 I 2
s Dicerorhinus_sumatrensis.PEKH010003161.1                 323074 3 +    993696 tt---t
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 I 5
s Diceros_bicornis.DicBicMic_scaffold_9545                   3725 3 +    151128 TT---T
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 I 6
s Dinomys_branickii.DinBra_scaffold_1996                   157542 1 +    228994 -----T
i Dinomys_branickii.DinBra_scaffold_1996                C 0 I 2
s Dolichotis_patagonum.DolPat_scaffold_14102                36631 1 -     73477 -----T
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 I 2
s Dipodomys_ordii.KN672545.1                              3656904 2 +   4240102 TT----
i Dipodomys_ordii.KN672545.1                            C 0 I 2
s Dipodomys_stephensi.DipSte_scaffold_44365                 28547 2 +     28912 TT----
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 I 2
s Echinops_telfairi.JH980316.1                           22999463 3 -  44670279 tt---t
i Echinops_telfairi.JH980316.1                          C 0 I 1
s Eidolon_helvum.KE772537.1                                 12789 3 +     24177 ag---a
i Eidolon_helvum.KE772537.1                             C 0 I 1
s Elaphurus_davidianus.JRFZ01086400.1                     1491999 2 +   1727528 AT----
i Elaphurus_davidianus.JRFZ01086400.1                   I 2 I 1
s Enhydra_lutris.KZ291749.1                              85872735 3 +  99434291 tt---t
i Enhydra_lutris.KZ291749.1                             C 0 I 4
s Equus_asinus.JREZ01000062.1                             5853522 3 -   7175178 tt---t
i Equus_asinus.JREZ01000062.1                           C 0 I 2
s Equus_caballus.CM000402.2                              13352027 3 +  41866177 tt---t
i Equus_caballus.CM000402.2                             C 0 I 2
s Equus_przewalskii.ATBW01073585.1                          13516 3 +     92910 tt---t
i Equus_przewalskii.ATBW01073585.1                      C 0 I 2
s Erinaceus_europaeus.JH835290.1                         11534809 3 +  16010500 AT---T
i Erinaceus_europaeus.JH835290.1                        C 0 I 2
s Erythrocebus_patas.Contig8                             48776191 3 -  48907691 TT---T
i Erythrocebus_patas.Contig8                            C 0 I 2
s Eschrichtius_robustus.EscRob_flattened_line_685          315571 3 +    330699 TT---A
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 I 2
s Eubalaena_japonica.EubJap_flattened_line_7756             62024 3 +     89355 TT---A
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 I 2
s Eulemur_albifrons.k141_715837                              5781 3 +     13586 TT---T
i Eulemur_albifrons.k141_715837                         I 1 I 1
s Eulemur_collaris.k141_311830                               5711 3 -      6809 TT---T
i Eulemur_collaris.k141_311830                          I 1 I 4
s Eulemur_coronatus.k141_3240342                            12188 3 +     36558 TT---T
i Eulemur_coronatus.k141_3240342                        I 1 I 1
s Eulemur_flavifrons.k141_903901                             8509 3 +     60246 TT---T
i Eulemur_flavifrons.k141_903901                        I 1 I 1
s Eulemur_fulvus.k141_653297                                11986 3 +    109717 TT---T
i Eulemur_fulvus.k141_653297                            I 1 I 1
s Eulemur_macaco.k141_1341545                               16371 3 +     16540 TT---T
i Eulemur_macaco.k141_1341545                           I 1 I 1
s Eulemur_mongoz.k141_825972                                16647 3 +     27497 TT---T
i Eulemur_mongoz.k141_825972                            I 1 I 1
s Eulemur_rubriventer.k141_411740                           19103 3 +     26808 TT---T
i Eulemur_rubriventer.k141_411740                       I 1 I 1
s Eulemur_rufus.k141_1620292                                33842 3 +     46535 TT---T
i Eulemur_rufus.k141_1620292                            I 1 I 3
s Eulemur_sanfordi.k141_186399                              16566 3 -     29447 TT---T
i Eulemur_sanfordi.k141_186399                          I 1 I 1
s Felis_catus.CM001386.2                                129893480 6 - 159252932 tttctt
i Felis_catus.CM001386.2                                C 0 I 1
s Felis_catus_fca126.CM031420.1                         129280572 6 - 158578461 tttctt
i Felis_catus_fca126.CM031420.1                         C 0 I 1
s Felis_nigripes.FelNig_flattened_line_8080                 21712 6 +     52776 TTTCTT
i Felis_nigripes.FelNig_flattened_line_8080             C 0 I 1
s Galago_moholi.ctg555                                     211634 3 -    847004 TT---T
i Galago_moholi.ctg555                                  I 1 I 1
s Galago_senegalensis.k141_964197                           14008 3 -     43889 TT---T
i Galago_senegalensis.k141_964197                       I 1 I 1
s Galagoides_demidoff.k141_1769638                          11074 3 +     27357 TT---T
i Galagoides_demidoff.k141_1769638                      I 1 I 1
s Galeopterus_variegatus.GalVar_scaffold_354               156843 3 +    324696 TT---T
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 I 1
s Giraffa_tippelskirchi.LVKQ01S012154.1                    181800 2 -    189561 at----
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 I 5
s Glis_glis.GliGli_scaffold_79770                           14299 3 -     18683 TT---G
i Glis_glis.GliGli_scaffold_79770                       C 0 I 2
s Gorilla_beringei.k141_111300                               5910 3 -     14630 TT---T
i Gorilla_beringei.k141_111300                          C 0 I 2
s Gorilla_gorilla.LT578340.1                            119653010 3 - 195582420 tt---t
i Gorilla_gorilla.LT578340.1                            C 0 I 2
s Hapalemur_alaotrensis.k141_1280836                         2568 3 +     10286 TT---T
i Hapalemur_alaotrensis.k141_1280836                    I 3 I 1
s Hapalemur_gilberti.k141_279011                             1043 3 -     11661 TT---T
i Hapalemur_gilberti.k141_279011                        I 3 I 6
s Hapalemur_griseus.k141_1387522                             6372 5 +     56096 TT-TTT
i Hapalemur_griseus.k141_1387522                        I 3 I 1
s Hapalemur_meridionalis.k141_186231                        29623 3 -     42470 TT---T
i Hapalemur_meridionalis.k141_186231                    I 3 I 1
s Hapalemur_occidentalis.k141_797938                        46251 3 -     54384 TT---T
i Hapalemur_occidentalis.k141_797938                    I 3 I 1
s Helogale_parvula.HelPar_flattened_line_22962              17759 6 +     53719 TTTCTT
i Helogale_parvula.HelPar_flattened_line_22962          C 0 I 1
s Heterocephalus_glaber.JH602058.1                        2551638 1 +  31725842 -----t
i Heterocephalus_glaber.JH602058.1                      C 0 I 2
s Hemitragus_hylocrius.HemHyl_scaffold_16669                28015 2 -     91191 AT----
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 I 5
s Hippopotamus_amphibius.HipAmp_scaffold_1308              147660 3 +    277961 AC---A
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 I 2
s Hipposideros_armiger.JXIK01001085.1                      278932 3 -    477199 ag---a
i Hipposideros_armiger.JXIK01001085.1                   C 0 I 8
s Hipposideros_galeritus.HipGal_scaffold_104691              8079 3 -      9143 AG---A
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 I 11
s Hoolock_leuconedys.ctg79                                      5597 3 -   7690867 TT---T
i Hoolock_leuconedys.ctg79                                 C 0 I 2
s Hyaena_hyaena.HyaHya_flattened_line_20729                 17836 6 -     67322 ACTCTT
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 I 1
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19540 1 -    119109 -----T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 I 2
s Hylobates_abbotti.k141_164775                               401 3 -      2073 TT---T
i Hylobates_abbotti.k141_164775                         C 0 I 7
s Hylobates_agilis.k141_1878600                               638 3 -      1230 TT---T
i Hylobates_agilis.k141_1878600                         C 0 I 2
s Hylobates_pileatus_b.ContigUN                                 14625291 3 -  25970782 TT---T
i Hylobates_pileatus_b.ContigUN                                C 0 I 2
s Hylobates_muelleri.k141_1389047                            2547 3 -      2977 TT---T
i Hylobates_muelleri.k141_1389047                       C 0 I 2
s Hylobates_pileatus_a.tarseq_592                             34450 3 -     60944 TT---T
i Hylobates_pileatus_a.tarseq_592                         C 0 I 2
s Hystrix_cristata.HysCri_scaffold_50788                     6708 1 +     22540 -----T
i Hystrix_cristata.HysCri_scaffold_50788                C 0 I 2
s Ictidomys_tridecemlineatus.JH393315.1                   7126394 3 +  13083262 tc---c
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 I 3
s Indri_indri.k141_5141390                                   1097 3 -      3181 TT---A
i Indri_indri.k141_5141390                              I 7 I 1
s Inia_geoffrensis.IniGeo_flattened_line_66725               9560 3 +     17520 TT---A
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 I 2
s Jaculus_jaculus.JH725517.1                              8566478 3 +  11848649 CT---T
i Jaculus_jaculus.JH725517.1                            C 0 I 2
s Kogia_breviceps.KogBre_flattened_line_35920               24167 3 +     37189 TT---A
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 I 2
s Lagothrix_lagothricha.k141_12968                          50801 3 -    147782 TT---T
i Lagothrix_lagothricha.k141_12968                      C 0 I 2
s Lemur_catta.scaffold_1                                258407930 3 - 285822530 TT---G
i Lemur_catta.scaffold_1                                I 3 I 1
s Lepilemur_ankaranensis.k141_884009                        24683 3 +     39228 TT---T
i Lepilemur_ankaranensis.k141_884009                    I 6 I 1
s Lepilemur_dorsalis.k141_134267                            54069 3 +     63517 TT---T
i Lepilemur_dorsalis.k141_134267                        I 8 I 1
s Lepilemur_ruficaudatus.k141_617879                        79331 3 +    116806 TT---T
i Lepilemur_ruficaudatus.k141_617879                    I 6 I 1
s Lepilemur_septentrionalis.k141_578524                     32322 3 -     33031 TT---T
i Lepilemur_septentrionalis.k141_578524                 I 6 I 1
s Leptonychotes_weddellii.KB714749.1                      3086524 3 -   3498232 tt---t
i Leptonychotes_weddellii.KB714749.1                    C 0 I 1
s Lepus_americanus.LepAme_scaffold_62849                    13810 3 +     22452 AT---T
i Lepus_americanus.LepAme_scaffold_62849                C 0 I 2
s Lipotes_vexillifer.KE558548.1                            136517 3 +   3060487 tt---a
i Lipotes_vexillifer.KE558548.1                         C 0 I 2
s Lophocebus_aterrimus.ctg55                             19248947 3 +  19376315 TT---T
i Lophocebus_aterrimus.ctg55                            C 0 I 2
s Loris_lydekkerianus.k141_550999                           11377 3 +     84689 TT---G
i Loris_lydekkerianus.k141_550999                       C 0 I 1
s Loris_tardigradus.ctg97                                 3779126 3 +   6799190 TT---G
i Loris_tardigradus.ctg97                               C 0 I 1
s Loxodonta_africana.GL010040.1                          20595351 3 -  62548349 tt---t
i Loxodonta_africana.GL010040.1                         C 0 I 3
s Lycaon_pictus.CM007556.1                               11088663 3 +  39895028 tt---t
i Lycaon_pictus.CM007556.1                              C 0 I 1
s Macaca_arctoides.k141_2201161                             20682 3 +     74745 TT---T
i Macaca_arctoides.k141_2201161                         C 0 I 2
s Macaca_assamensis.Contig65                             12707139 3 +  12821369 TT---T
i Macaca_assamensis.Contig65                            C 0 I 2
s Macaca_cyclopis.k119_893486                                2781 3 -      3136 TT---T
i Macaca_cyclopis.k119_893486                           C 0 I 2
s Macaca_fascicularis.k141_155037                           47596 3 +     63263 TT---T
i Macaca_fascicularis.k141_155037                       C 0 I 2
s Macaca_fuscata.k119_599327                                 2304 3 -      2568 TT---T
i Macaca_fuscata.k119_599327                            C 0 I 2
s Macaca_leonina.k141_467472                                 2889 3 -      7381 TT---T
i Macaca_leonina.k141_467472                            C 0 I 2
s Macaca_maura.k141_251854                                  46106 3 -     79256 TT---T
i Macaca_maura.k141_251854                              C 0 I 2
s Macaca_mulatta.NC_041755.1                            196036213 3 + 196197964 tt---t
i Macaca_mulatta.NC_041755.1                            C 0 I 2
s Macaca_nemestrina.KQ004885.1                           11446383 3 +  11645122 tt---t
i Macaca_nemestrina.KQ004885.1                          C 0 I 2
s Macaca_nigra.k141_282495                                   5053 3 -     46448 TT---T
i Macaca_nigra.k141_282495                              C 0 I 2
s Macaca_radiata.k141_3680256                                2727 3 -     13212 TT---T
i Macaca_radiata.k141_3680256                           C 0 I 2
s Macaca_siberu.k141_741907                                 16406 3 -     55006 TT---T
i Macaca_siberu.k141_741907                             C 0 I 2
s Macaca_silenus.Contig12                                43841522 3 +  43892939 TT---T
i Macaca_silenus.Contig12                               C 0 I 2
s Macaca_thibetana.k99_662710                               17692 3 -     24607 TT---T
i Macaca_thibetana.k99_662710                           C 0 I 2
s Macaca_tonkeana.k141_2870633                               5058 3 -     27140 TT---T
i Macaca_tonkeana.k141_2870633                          C 0 I 2
s Mandrillus_leucophaeus.scaffold125                     43438107 3 -  43563597 TT---T
i Mandrillus_leucophaeus.scaffold125                    C 0 I 2
s Mandrillus_sphinx.Contig144                             4450927 3 -   4543643 TT---T
i Mandrillus_sphinx.Contig144                           C 0 I 2
s Manis_javanica.JSZB01003966.1                            146607 3 +    252755 tt---t
i Manis_javanica.JSZB01003966.1                         C 0 I 3
s Manis_pentadactyla.KN017078.1                             36750 3 +     58827 tt---t
i Manis_pentadactyla.KN017078.1                         C 0 I 3
s Marmota_marmota.CZRN01000005.1                         36874213 3 +  64221397 TC---C
i Marmota_marmota.CZRN01000005.1                        C 0 I 3
s Mellivora_capensis.MelCap_flattened_line_15433             1547 3 -     87323 TT---T
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 I 4
s Meriones_unguiculatus.MerUng_scaffold_52233               13473 3 +     15977 TT---A
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 I 2
s Mesocricetus_auratus.KB708139.1                         1047437 3 -  26018355 CT---A
i Mesocricetus_auratus.KB708139.1                       C 0 I 2
s Mesoplodon_bidens.MesBid_scaffold_227248                    844 3 -      1377 TT---A
i Mesoplodon_bidens.MesBid_scaffold_227248              C 0 I 2
s Microcebus_murinus.CM007691.1                          16510957 3 +  47401472 at---a
i Microcebus_murinus.CM007691.1                         I 8 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  35460 3 -     48017 TT---T
i Microgale_talazaci.MicTal_scaffold_34660              C 0 I 1
s Micronycteris_hirsuta.MicHir_scaffold_37978               23453 3 -     32043 AG---A
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 I 2
s Miniopterus_natalensis.LDJU01000022.1                   8210611 3 +  10048721 ag---t
i Miniopterus_natalensis.LDJU01000022.1                 C 0 I 2
s Miniopterus_schreibersii.MinSch_scaffold_24116            35100 3 +     45743 AG---T
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 I 2
s Miopithecus_ogouensis.k141_2935907                         2656 3 +     29742 TT---T
i Miopithecus_ogouensis.k141_2935907                    C 0 I 2
s Mirounga_angustirostris.MirAng_flattened_line_8852        12040 3 -    104932 TT---T
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 I 1
s Mirza_zaza.k141_226143                                     6346 3 +      8497 AA---A
i Mirza_zaza.k141_226143                                I 8 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 146945 3 +    154973 TT---A
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 I 2
s Mormoops_blainvillei.MorMeg_scaffold_2952                161973 3 +    265003 AG---A
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 I 2
s Moschus_moschiferus.MosMos_scaffold_78805                  2031 2 -     19904 AT----
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 I 4
s Mungos_mungo.MunMun_flattened_line_8729                  145454 6 -    168139 TTTCTT
i Mungos_mungo.MunMun_flattened_line_8729               C 0 I 1
s Murina_feae.MurFea_scaffold_2254                          20074 2 -    100666 AA----
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70767084 3 +  92629107 tt---a
i Mus_caroli.LT608236.1                                 C 0 I 2
s Mus_musculus.chr16                                     75490144 3 +  98207768 TT---A
i Mus_musculus.chr16                                    C 0 I 2
s Mus_pahari.LT608305.1                                  67556372 3 +  89017189 tt---g
i Mus_pahari.LT608305.1                                 C 0 I 2
s Mus_spretus.CM004110.1                                 74331319 3 +  97876770 tt---a
i Mus_spretus.CM004110.1                                C 0 I 2
s Muscardinus_avellanarius.MusAve_scaffold_9643             12578 3 +     98495 TT---G
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 I 2
s Mustela_putorius.JH417978.1                             4424916 3 -  28371801 tt---t
i Mustela_putorius.JH417978.1                           C 0 I 3
s Myocastor_coypus.MyoCoy_scaffold_3653                     90658 1 -    117718 -----T
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 I 2
s Myotis_brandtii.KE161952.1                               968603 3 +   8389877 ag---t
i Myotis_brandtii.KE161952.1                            C 0 I 2
s Myotis_davidii.KB114863.1                               5020278 3 +   6462685 ag---t
i Myotis_davidii.KB114863.1                             C 0 I 2
s Myotis_lucifugus.GL429887.1                             3466187 3 -   3747815 AG---T
i Myotis_lucifugus.GL429887.1                           C 0 I 2
s Myotis_myotis.MyoMyo_scaffold_6123                        11397 3 +     66751 AG---T
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 I 2
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             5570 3 -      8794 AT---T
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 I 1
s Nasalis_larvatus.k141_153429                               9163 3 +     48152 TT---T
i Nasalis_larvatus.k141_153429                          C 0 I 2
s Neomonachus_schauinslandi.NINY01007774.1                4485430 3 -  14209539 tt---t
i Neomonachus_schauinslandi.NINY01007774.1              C 0 I 1
s Neophocaena_asiaeorientalis.KZ688543.1                  3951557 3 -   4490290 tt---a
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 I 2
s Nomascus_annamensis.k141_720788                             545 3 -      1065 TT---T
i Nomascus_annamensis.k141_720788                       C 0 I 2
s Nomascus_concolor.k141_581629                               108 3 -      6578 TT---T
i Nomascus_concolor.k141_581629                         I 7 I 2
s Nomascus_gabriellae.k141_1004198                            416 3 +      1448 TT---T
i Nomascus_gabriellae.k141_1004198                      C 0 I 2
s Nomascus_siki_b.tarseq_80                             25567 3 -  18771707 TT---T
i Nomascus_siki_b.tarseq_80                         C 0 I 2
s Nomascus_siki_a.k141_595747                                  3270 3 +      4512 TT---T
i Nomascus_siki_a.k141_595747                             C 0 I 2
s Nyctereutes_procyonoides.CAJHUB010000786.1                31464 3 +   3668941 tt---t
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 I 1
s Nycticebus_bengalensis.LG16                            65567831 3 -  95554990 TT---G
i Nycticebus_bengalensis.LG16                           C 0 I 1
s Nycticebus_coucang.k141_2051882                            4557 3 +      6470 TT---G
i Nycticebus_coucang.k141_2051882                       C 0 I 1
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65670166 3 +  89412551 TT---G
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 I 1
s Ochotona_princeps.JH802095.1                            4996557 3 -  23139505 TT---C
i Ochotona_princeps.JH802095.1                          C 0 I 2
s Octodon_degus.JH651621.1                                3686441 1 +  10294119 -----t
i Octodon_degus.JH651621.1                              C 0 I 2
s Odobenus_rosmarus.KB229369.1                             680097 2 -   3126709 tt----
i Odobenus_rosmarus.KB229369.1                          C 0 I 2
s Odocoileus_virginianus.KZ101650.1                       1080214 2 +   1425656 AT----
i Odocoileus_virginianus.KZ101650.1                     C 0 I 1
s Okapia_johnstoni.LVCL01S0017931.1                         37528 2 +     78940 at----
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 I 5
s Onychomys_torridus.OnyTor_scaffold_12578                  37628 3 +     62360 TT---A
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 I 2
s Orcinus_orca.KB316965.1                                 7225242 3 -   7562323 tt---a
i Orcinus_orca.KB316965.1                               C 0 I 2
s Orycteropus_afer.OryAfe_flattened_line_13509              58575 3 -     66828 GT---T
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 I 8
s Oryctolagus_cuniculus.CM000803.1                      141876844 3 + 163896628 at---t
i Oryctolagus_cuniculus.CM000803.1                      C 0 I 5
s Otocyon_megalotis.JAEUCK010005121.1                      308748 3 -    505867 tt---t
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 I 1
s Otolemur_crassicaudatus.k141_505435                        1449 3 -     53940 TT---T
i Otolemur_crassicaudatus.k141_505435                   I 1 I 1
s Otolemur_garnettii.GL873528.1                          18009430 3 -  38779656 tt---t
i Otolemur_garnettii.GL873528.1                         I 2 I 1
s Ovis_aries.CM001582.2                                 134077806 2 - 275406953 at----
i Ovis_aries.CM001582.2                                 C 0 I 5
s Ovis_canadensis.OviCan_scaffold_6251                      79021 2 +    140051 AT----
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 I 5
s Pan_paniscus.CM003386.1                               127575276 3 - 205426864 tt---t
i Pan_paniscus.CM003386.1                               I 7 I 2
s Pan_troglodytes.CM009241.2                            120152430 3 - 196562556 tt---t
i Pan_troglodytes.CM009241.2                            I 7 I 2
s Panthera_onca.PanOnc_flattened_line_1615                  34850 6 +    295523 TTTCTT
i Panthera_onca.PanOnc_flattened_line_1615              C 0 I 1
s Panthera_pardus.KV860323.1                              3638584 6 +  18214204 tttctt
i Panthera_pardus.KV860323.1                            C 0 I 1
s Panthera_tigris.KE721879.1                              5028259 6 -   6340057 tttctt
i Panthera_tigris.KE721879.1                            C 0 I 1
s Pantholops_hodgsonii.KE114631.1                         1066656 2 -   1292953 AT----
i Pantholops_hodgsonii.KE114631.1                       C 0 I 5
s Papio_anubis.CM001492.2                               188156894 3 - 188283584 tt---t
i Papio_anubis.CM001492.2                               C 0 I 2
s Papio_cynocephalus.k141_883042                             5211 3 +      5367 TT---T
i Papio_cynocephalus.k141_883042                        C 0 I 2
s Papio_hamadryas.Contig15                               47514279 3 +  47705337 TT---T
i Papio_hamadryas.Contig15                              C 0 I 2
s Papio_kindae.k141_5458022                                 68255 3 -    104429 TT---T
i Papio_kindae.k141_5458022                             C 0 I 2
s Papio_papio.k141_979496                                    6791 3 +     14967 TT---T
i Papio_papio.k141_979496                               C 0 I 2
s Papio_ursinus.k141_1345919                                 2650 3 -      7628 TT---T
i Papio_ursinus.k141_1345919                            C 0 I 2
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    116341 6 -    135482 TTTCTT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 I 1
s Perodicticus_ibeanus.k141_117958                           6135 3 -     23713 TT---C
i Perodicticus_ibeanus.k141_117958                      C 0 I 1
s Perodicticus_potto.k141_713187                            25449 3 -     27972 TT---C
i Perodicticus_potto.k141_713187                        C 0 I 1
s Perognathus_longimembris.PerPac_flattened_line_19359        586 2 +     49596 tt----
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 I 2
s Peromyscus_maniculatus.KI615518.1                       4950875 3 -   8017169 TT---A
i Peromyscus_maniculatus.KI615518.1                     C 0 I 2
s Petromus_typicus.PetTyp_scaffold_33007                    14167 1 -     36578 -----T
i Petromus_typicus.PetTyp_scaffold_33007                C 0 I 3
s Phocoena_phocoena.PhoPho_flattened_line_11948            121846 3 -    122454 TT---A
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 I 2
s Piliocolobus_badius.k141_1987485                           2677 3 -      5908 TT---T
i Piliocolobus_badius.k141_1987485                      C 0 I 2
s Piliocolobus_gordonorum.k141_1270531                       3301 3 -     17985 TT---T
i Piliocolobus_gordonorum.k141_1270531                  C 0 I 2
s Piliocolobus_kirkii.k141_929665                            2668 3 +      7694 TT---T
i Piliocolobus_kirkii.k141_929665                       C 0 I 2
s Piliocolobus_tephrosceles.PDMG02000036.1               26741146 3 +  26888534 tt---t
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 I 2
s Pithecia_albicans.k141_991845                             44407 3 -     61926 TT---T
i Pithecia_albicans.k141_991845                         C 0 I 2
s Pithecia_chrysocephala.k141_159118                        25792 3 +     78826 TT---T
i Pithecia_chrysocephala.k141_159118                    C 0 I 2
s Pithecia_hirsuta.k141_1152968                              9839 3 -     15800 TT---T
i Pithecia_hirsuta.k141_1152968                         C 0 I 2
s Pithecia_mittermeieri.k141_2119203                        13038 3 -     16101 TT---T
i Pithecia_mittermeieri.k141_2119203                    C 0 I 2
s Pithecia_pissinattii.k141_1102319                          6266 3 +      9673 TT---T
i Pithecia_pissinattii.k141_1102319                     C 0 I 2
s Pithecia_pithecia.tarseq_313                           13475266 3 -  19735023 TT---T
i Pithecia_pithecia.tarseq_313                          C 0 I 2
s Pithecia_vanzolinii.k141_831006                           14169 3 -     31692 TT---T
i Pithecia_vanzolinii.k141_831006                       C 0 I 2
s Platanista_gangetica.PlaMin_flattened_line_72990           5933 3 +     21690 TT---A
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 I 2
s Plecturocebus_bernhardi.k141_959214                       23509 3 +     44506 TT---T
i Plecturocebus_bernhardi.k141_959214                   C 0 I 2
s Plecturocebus_brunneus.k141_498086                        23721 3 +     67491 TT---T
i Plecturocebus_brunneus.k141_498086                    C 0 I 2
s Plecturocebus_caligatus.k141_2539816                      13961 3 -     98129 TT---T
i Plecturocebus_caligatus.k141_2539816                  C 0 I 2
s Plecturocebus_cinerascens.k141_744510                     23561 3 +    147771 TT---T
i Plecturocebus_cinerascens.k141_744510                 C 0 I 2
s Plecturocebus_cupreus.k141_1145860                          197 3 -     43940 TT---T
i Plecturocebus_cupreus.k141_1145860                    C 0 I 2
s Plecturocebus_dubius.k141_3565563                          4280 3 -     55515 TT---T
i Plecturocebus_dubius.k141_3565563                     C 0 I 2
s Plecturocebus_grovesi.k141_242819                         23634 3 +    152463 TT---T
i Plecturocebus_grovesi.k141_242819                     C 0 I 2
s Plecturocebus_hoffmannsi.k141_985533                       1351 3 -    119457 TT---T
i Plecturocebus_hoffmannsi.k141_985533                  C 0 I 2
s Plecturocebus_miltoni.k141_841561                         13357 3 +    134592 TT---T
i Plecturocebus_miltoni.k141_841561                     C 0 I 2
s Plecturocebus_moloch.k141_890597                          23944 3 -     75465 TT---T
i Plecturocebus_moloch.k141_890597                      C 0 I 2
s Pongo_abelii.NDHI03003816.1                              187796 3 -    373494 tt---t
i Pongo_abelii.NDHI03003816.1                           C 0 I 2
s Pongo_pygmaeus.ctg62                                   19808444 3 +  19899266 TT---T
i Pongo_pygmaeus.ctg62                                  C 0 I 2
s Presbytis_comata.k141_672698                               6407 3 -     15069 TT---T
i Presbytis_comata.k141_672698                          C 0 I 2
s Presbytis_mitrata.k141_860013                              6537 3 +     14865 TT---T
i Presbytis_mitrata.k141_860013                         C 0 I 2
s Prolemur_simus.MPIZ01000048.1                           6849297 3 +  12164890 tt---t
i Prolemur_simus.MPIZ01000048.1                         I 7 I 1
s Propithecus_coquerelli.NW_012147863.1                     19467 3 -     30946 nn---n
i Propithecus_coquerelli.NW_012147863.1                 I 14 I 1
s Propithecus_diadema.k141_577245                           43720 3 +     52369 TT---T
i Propithecus_diadema.k141_577245                       I 5 I 1
s Propithecus_edwardsi.k141_1317105                         36107 3 -     44753 TT---T
i Propithecus_edwardsi.k141_1317105                     I 5 I 1
s Propithecus_perrieri.k141_7554                            18030 3 +     27322 TT---T
i Propithecus_perrieri.k141_7554                        I 4 I 1
s Propithecus_tattersalli.k141_907138                       17664 3 -     53241 TT---T
i Propithecus_tattersalli.k141_907138                   I 5 I 1
s Psammomys_obesus.NESX01026517.1                           35756 3 +     77221 tt---a
i Psammomys_obesus.NESX01026517.1                       C 0 I 2
s Pteronotus_parnellii.KE867983.1                            4613 3 -     27784 ag---a
i Pteronotus_parnellii.KE867983.1                       C 0 I 2
s Pteronura_brasiliensis.PteBra_flattened_line_1343        247226 3 -    344369 TT---C
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 I 4
s Pteropus_alecto.KB031157.1                             13246526 3 -  17261082 ac---a
i Pteropus_alecto.KB031157.1                            C 0 I 1
s Pteropus_vampyrus.KN525959.1                             604477 3 -   3946241 ac---a
i Pteropus_vampyrus.KN525959.1                          C 0 I 1
s Puma_concolor.QAVW01000427.1                          131534864 6 - 161321710 tttctt
i Puma_concolor.QAVW01000427.1                          C 0 I 1
s Pygathrix_cinerea.k141_374971                             30528 3 +     56732 TT---T
i Pygathrix_cinerea.k141_374971                         C 0 I 2
s Pygathrix_nigripes_b.ctg79                                 6807016 3 +   6970761 TT---T
i Pygathrix_nigripes_b.ctg79                               C 0 I 2
s Pygathrix_nigripes_a.k141_101123                             6407 3 +     18040 TT---T
i Pygathrix_nigripes_a.k141_101123                        C 0 I 2
s Rangifer_tarandus.RanTarSib_scaffold_24239                16328 2 +     68503 AT----
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 I 1
s Rhinolophus_sinicus.LVEH01000179.1                      1788355 3 +   2252614 ag---t
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 I 37
s Rhinopithecus_bieti.k119_554384                             817 3 -     17045 TT---C
i Rhinopithecus_bieti.k119_554384                       C 0 I 2
s Rhinopithecus_roxellana.NC_044549.1                   206378294 3 - 206558726 TT---C
i Rhinopithecus_roxellana.NC_044549.1                   C 0 I 2
s Rhinopithecus_strykeri.ctg4                            44857208 3 -  45163003 TT---C
i Rhinopithecus_strykeri.ctg4                           C 0 I 2
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                19855 3 +    109198 AG---A
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 I 1
s Saiga_tatarica.SaiTat_scaffold_82192                       8481 2 +     12214 AT----
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 I 5
s Saimiri_boliviensis.NW_024100938.1                     15673366 3 -  43202129 TT---T
i Saimiri_boliviensis.NW_024100938.1                    I 2 I 2
s Saimiri_cassiquiarensis.k141_808270                        5279 3 +     34089 TT---T
i Saimiri_cassiquiarensis.k141_808270                   I 2 I 2
s Saimiri_macrodon.k141_2087127                              5221 3 -     60842 TT---T
i Saimiri_macrodon.k141_2087127                         I 2 I 2
s Saimiri_oerstedii.k141_841116                              5314 3 +     67014 TT---T
i Saimiri_oerstedii.k141_841116                         I 2 I 2
s Saimiri_sciureus.k141_1947592                              5292 3 +     60816 TT---T
i Saimiri_sciureus.k141_1947592                         I 2 I 2
s Saimiri_ustus.k141_1282476                                 5229 3 -     76454 TT---T
i Saimiri_ustus.k141_1282476                            I 2 I 2
s Sapajus_apella.ctg10                                   17341956 3 -  30362882 TT---T
i Sapajus_apella.ctg10                                  C 0 I 2
s Sapajus_macrocephalus.k141_966464                         21317 3 -     62485 TT---T
i Sapajus_macrocephalus.k141_966464                     C 0 I 2
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   32815 3 -    114521 TT---C
i Scalopus_aquaticus.ScaAqu_scaffold_9300               I 1 I 2
s Semnopithecus_entellus.k141_1572367                        4020 3 +     15331 TT---T
i Semnopithecus_entellus.k141_1572367                   C 0 I 2
s Semnopithecus_hypoleucos.k141_761524                       9413 3 +     20762 TT---T
i Semnopithecus_hypoleucos.k141_761524                  C 0 I 2
s Semnopithecus_johnii.k141_785014                         119416 3 +    130994 TT---T
i Semnopithecus_johnii.k141_785014                      C 0 I 2
s Semnopithecus_priam.k141_410937                           38202 3 +     46263 TT---T
i Semnopithecus_priam.k141_410937                       C 0 I 2
s Semnopithecus_schistaceus.k141_387461                     31322 3 +     42640 TT---T
i Semnopithecus_schistaceus.k141_387461                 C 0 I 2
s Semnopithecus_vetulus.k141_1143185                        14362 3 +     30600 TT---T
i Semnopithecus_vetulus.k141_1143185                    C 0 I 2
s Sigmodon_hispidus.SigHis_scaffold_11332                  100813 3 -    120886 TT---A
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 I 2
s Solenodon_paradoxus.SolPar_flattened_line_1012            19421 3 +    739146 AT---T
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 I 2
s Sorex_araneus.JH798170.1                               17766995 3 -  27805282 tt---t
i Sorex_araneus.JH798170.1                              C 0 I 5
s Spermophilus_dauricus.KZ294190.1                        2240310 3 +   2842873 tc---c
i Spermophilus_dauricus.KZ294190.1                      C 0 I 3
s Spilogale_gracilis.SpiGra_flattened_line_905             235344 3 -    276980 TT---T
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 I 10
s Suricata_suricatta.SurSur_flattened_line_20339            28114 6 +     62062 TTTCTT
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 I 1
s Sus_scrofa.CM000824.4                                 189272638 2 + 218635234 at----
i Sus_scrofa.CM000824.4                                 C 0 I 1
s Symphalangus_syndactylus.tarseq_24                        15552 3 -  13920577 TT---T
i Symphalangus_syndactylus.tarseq_24                    C 0 I 2
s Tadarida_brasiliensis.TadBra_scaffold_61492                 793 3 +     20549 GA---T
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 I 2
s Tamandua_tetradactyla.TamTet_scaffold_26877               15236 3 +     45698 AT---T
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 I 1
s Tapirus_indicus.TapInd_scaffold_176                      807663 3 +   1148477 TT---T
i Tapirus_indicus.TapInd_scaffold_176                   C 0 I 2
s Tapirus_terrestris.TapTer_scaffold_14939                  58374 3 +     99546 TT---T
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 I 3
s Tarsius_lariang.k141_609102                               27031 2 +     42269 TT----
i Tarsius_lariang.k141_609102                           C 0 I 1
s Tarsius_wallacei.k141_48636                               60347 2 +     65473 TT----
i Tarsius_wallacei.k141_48636                           C 0 I 1
s Theropithecus_gelada.CM009951.1                       194008416 3 - 194193292 tt---t
i Theropithecus_gelada.CM009951.1                       C 0 I 2
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             39392 1 -     47444 -----T
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 I 3
s Tolypeutes_matacus.TolMat_scaffold_269431                  6045 2 +      6782 TT----
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  136610 3 -    259118 AG---T
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 I 2
s Trachypithecus_auratus.k141_738098                        27518 3 +     38948 TT---T
i Trachypithecus_auratus.k141_738098                    C 0 I 2
s Trachypithecus_crepusculus.k141_1588528                   21250 3 -     32910 TT---T
i Trachypithecus_crepusculus.k141_1588528               C 0 I 2
s Trachypithecus_cristatus.k141_1011511                      2636 3 -     12939 TT---T
i Trachypithecus_cristatus.k141_1011511                 C 0 I 2
s Trachypithecus_francoisi.k141_768164                       2572 3 -     14244 TT---T
i Trachypithecus_francoisi.k141_768164                  C 0 I 2
s Trachypithecus_geei.k141_670367                           43971 3 -     54611 TT---T
i Trachypithecus_geei.k141_670367                       C 0 I 2
s Trachypithecus_germaini.k141_868450                        1774 3 -     11566 TT---T
i Trachypithecus_germaini.k141_868450                   C 0 I 2
s Trachypithecus_hatinhensis.k141_504423                     3951 3 -     15592 TT---T
i Trachypithecus_hatinhensis.k141_504423                C 0 I 2
s Trachypithecus_laotum.k141_760702                          2607 3 +     14371 TT---T
i Trachypithecus_laotum.k141_760702                     C 0 I 2
s Trachypithecus_leucocephalus.k141_381681                    888 3 +     12481 TT---T
i Trachypithecus_leucocephalus.k141_381681              C 0 I 2
s Trachypithecus_melamera.k141_699241                         764 3 -     24393 TT---T
i Trachypithecus_melamera.k141_699241                   C 0 I 2
s Trachypithecus_obscurus.k141_1115109                       6010 3 -     28054 TT---T
i Trachypithecus_obscurus.k141_1115109                  C 0 I 2
s Trachypithecus_phayrei.ctg3                            44660810 3 -  44834318 TT---T
i Trachypithecus_phayrei.ctg3                           C 0 I 2
s Trachypithecus_pileatus.k141_1022309                       3118 3 +     13828 TT---T
i Trachypithecus_pileatus.k141_1022309                  C 0 I 2
s Tragulus_javanicus.TraJav_scaffold_14717                   5691 2 +     90398 AT----
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 I 1
s Trichechus_manatus.JH594618.1                          16085872 3 +  31416278 tt---t
i Trichechus_manatus.JH594618.1                         C 0 I 3
s Tupaia_chinensis.KB320831.1                             2793655 3 -   3938065 TT---T
i Tupaia_chinensis.KB320831.1                           C 0 I 1
s Tupaia_tana.TupTan_flattened_line_68454                    5841 3 +     13056 TT---T
i Tupaia_tana.TupTan_flattened_line_68454               C 0 I 1
s Tursiops_truncatus.MRVK01000923.1                      69313958 3 -  96451834 tt---a
i Tursiops_truncatus.MRVK01000923.1                     C 0 I 2
s Ursus_maritimus.KK498671.1                              6515354 3 +  28682327 tt---t
i Ursus_maritimus.KK498671.1                            C 0 I 1
s Varecia_rubra.k141_432109                                  5919 3 -     20643 TT---T
i Varecia_rubra.k141_432109                             I 3 I 1
s Varecia_variegata.k141_775891                             25460 3 -     33872 TT---T
i Varecia_variegata.k141_775891                         I 3 I 1
s Vicugna_pacos.KN269600.1                                1525207 3 -   2331223 tt---t
i Vicugna_pacos.KN269600.1                              C 0 I 1
s Vulpes_lagopus.VulLag_flattened_line_2045                138844 3 -    281493 TT---G
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 I 1
s Xerus_inauris.XerIna_scaffold_7898                       127426 3 -    134049 TC---C
i Xerus_inauris.XerIna_scaffold_7898                    C 0 I 2
s Zalophus_californianus.ZalCal_flattened_line_4097        214824 3 -    227762 TT---T
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 I 1
s Zapus_hudsonius.ZapHud_scaffold_64392                     16374 3 -     20485 CT---T
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 I 2
s Ziphius_cavirostris.ZipCav_flattened_line_127025           7457 3 -      8775 TT---A
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 I 2
e Eptesicus_fuscus.JH977687.1                             4705108 6 +   6522550 I
e Macroglossus_sobrinus.MacSob_scaffold_879                701732 90 +    802869 I
e Uropsilus_gracilis.UroGra_scaffold_69449                   1858 0 +     10241 C
e Procavia_capensis.ProCapCap_scaffold_149274                2467 1156 -      9567 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98453 6 +    112873 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Megaderma_lyra.MegLyr_scaffold_3562                       64783 239 -    234502 I
e Lasiurus_borealis.LasBor_scaffold_59542                     865 2 +     26176 I
e Heterohyrax_brucei.HetBruBak_scaffold_25354               61360 1157 +     73687 I
e Elephantulus_edwardii.JH947210.1                        7816981 2 +  15467074 I
e Crocidura_indochinensis.CroInd_scaffold_848148              199 0 +      1327 C
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1008 325 -      5782 I
e Hylobates_klossii.k141_285563                               343 193 +      1026 I
e Microtus_ochrogaster.CM001673.1                        22820341 4 -  98408828 I
e Rattus_norvegicus.chr11                                13915860 1475 +  90463843 I
e Propithecus_verreauxi.k141_158021                         39923 9 -     48185 I
e Propithecus_coronatus.k141_1353159                         4372 11 +     11805 I
e Ondatra_zibethicus.OndZib_scaffold_6821                  125594 4 +    145789 I
e Nannospalax_galili.KL201303.1                            119159 6 +    362372 I
e Graphiurus_murinus.GraMur_scaffold_4493                   77863 0 +    118900 C
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I
e Ellobius_talpinus.LOJH01090055.1                           7151 4 -      7838 I
e Ellobius_lutescens.LOEQ01003611.1                        240029 1 -    369425 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               12395  5 +    209709 T----------------------T--A------------A-------G
s Acinonyx_jubatus.LLWD01000356.1                         2034532  7 +   3721120 t----------------------t--t------------aaa-----a
i Acinonyx_jubatus.LLWD01000356.1                       I 1 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10657866  7 +  23371972 t----------------------t--a------------aaa-----g
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 2 C 0
s Ailurus_fulgens.LNAC01000003.1                          7095216  9 -  16596857 t----------------------aaaa------------aaa-----g
i Ailurus_fulgens.LNAC01000003.1                        I 4 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   17469  4 -     22067 T----------------------T--T------------A--------
i Allactaga_bullata.AllBul_scaffold_70162               I 1 C 0
s Allenopithecus_nigroviridis.k141_2469532                   1912  5 -     60446 T----------------------T--C------------A-------G
i Allenopithecus_nigroviridis.k141_2469532              I 2 C 0
s Allochrocebus_lhoesti.k141_3566948                         2632  5 -     29318 T----------------------T--C------------A-------G
i Allochrocebus_lhoesti.k141_3566948                    I 2 C 0
s Allochrocebus_preussi.k141_1108977                         1567  5 +     38766 T----------------------T--C------------A-------G
i Allochrocebus_preussi.k141_1108977                    I 2 C 0
s Allochrocebus_solatus.k141_371672                          2526  5 -     80423 T----------------------T--C------------A-------G
i Allochrocebus_solatus.k141_371672                     I 2 C 0
s Alouatta_belzebul.k141_1818029                            10826  5 -     18050 T----------------------T--A------------A-------G
i Alouatta_belzebul.k141_1818029                        I 2 C 0
s Alouatta_caraya.k141_1710068                                541  5 +      1555 T----------------------T--A------------A-------G
i Alouatta_caraya.k141_1710068                          I 2 C 0
s Alouatta_discolor.k141_811576                             11499  5 -     21359 T----------------------T--A------------A-------G
i Alouatta_discolor.k141_811576                         I 2 C 0
s Alouatta_juara.k141_1244470                                1120  5 +      2129 T----------------------T--A------------A-------G
i Alouatta_juara.k141_1244470                           I 2 C 0
s Alouatta_macconnelli.k141_2177643                           504  5 -      1868 T----------------------T--A------------A-------G
i Alouatta_macconnelli.k141_2177643                     I 2 C 0
s Alouatta_nigerrima.k141_3537692                             553  5 +      1660 T----------------------T--A------------A-------G
i Alouatta_nigerrima.k141_3537692                       I 2 C 0
s Alouatta_palliata.k141_2764429                              468  5 -      1480 T----------------------T--A------------A-------G
i Alouatta_palliata.k141_2764429                        I 2 C 0
s Alouatta_puruensis.k141_1284840                            4546  5 -      4927 T----------------------T--A------------A-------G
i Alouatta_puruensis.k141_1284840                       I 2 C 0
s Alouatta_seniculus.k141_1531728                             683  5 -      1692 T----------------------T--A------------A-------G
i Alouatta_seniculus.k141_1531728                       I 2 C 0
s Ammotragus_lervia.NIVO01013474.1                        3520662  7 +   4113121 T----------------------C--T------------A-----AAG
i Ammotragus_lervia.NIVO01013474.1                      I 5 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      391066  3 -    631301 T----------------------T--C---------------------
i Anoura_caudifer.AnoCau_scaffold_422                   I 2 I 7
s Antilocapra_americana.AntAmePen_scaffold_42841            31244  7 +     33004 T----------------------C--T------------A-----AAG
i Antilocapra_americana.AntAmePen_scaffold_42841        I 5 C 0
s Aotus_azarae.k141_3170768                                 63178  5 +     78111 T----------------------T--A------------A-------G
i Aotus_azarae.k141_3170768                             I 2 C 0
s Aotus_griseimembra.k141_3275623                            6120  5 +     22701 T----------------------T--A------------A-------G
i Aotus_griseimembra.k141_3275623                       I 2 C 0
s Aotus_nancymaae.KZ196176.1                              5750077  5 +   9889416 T----------------------T--A------------A-------G
i Aotus_nancymaae.KZ196176.1                            I 2 C 0
s Aotus_trivirgatus.k141_1740727                             6666  5 -    104377 T----------------------T--A------------A-------G
i Aotus_trivirgatus.k141_1740727                        I 2 C 0
s Aotus_vociferans.k141_718647                               6668  5 +     23246 T----------------------T--A------------A-------G
i Aotus_vociferans.k141_718647                          I 2 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     4220  7 +      5067 T----------------------T--T------------G-----ACA
i Aplodontia_rufa.AprRuf_scaffold_156013                I 2 C 0
s Arctocebus_calabarensis.k141_587554                        1732  4 +      9265 -----------------------A--A------------A-------G
i Arctocebus_calabarensis.k141_587554                   I 1 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 9484  3 -     29036 T----------------------A--A---------------------
i Artibeus_jamaicensis.ArtJam_scaffold_41619            I 2 I 7
s Ateles_geoffroyi_b.tarseq_2582                             9539937  5 +  39197703 T----------------------T--A------------A-------G
i Ateles_geoffroyi_b.tarseq_2582                           I 2 C 0
s Ateles_belzebuth.k141_1348307                             61208  5 +     85812 T----------------------T--A------------A-------G
i Ateles_belzebuth.k141_1348307                         I 2 C 0
s Ateles_chamek.k141_1072810                                12221  5 +     89302 T----------------------T--A------------A-------G
i Ateles_chamek.k141_1072810                            I 2 C 0
s Ateles_geoffroyi_a.k141_1300742                             16724  5 -     58268 T----------------------T--A------------A-------G
i Ateles_geoffroyi_a.k141_1300742                         I 2 C 0
s Ateles_marginatus.k141_899112                             64716  5 +    119057 T----------------------T--A------------A-------G
i Ateles_marginatus.k141_899112                         I 2 C 0
s Ateles_paniscus.k141_1631200                               6687  5 -     25888 T----------------------T--A------------A-------G
i Ateles_paniscus.k141_1631200                          I 2 C 0
s Avahi_laniger.k141_2840928                                 7468  5 -     16375 A----------------------A--A------------A-------G
i Avahi_laniger.k141_2840928                            I 1 C 0
s Avahi_peyrierasi.k141_798820                               1085  4 +      6337 -----------------------A--A------------A-------G
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26380736  7 +  51448160 t----------------------t--t------------aaa-----g
i Balaenoptera_acutorostrata.KI537095.1                 I 2 C 0
s Balaenoptera_bonaerensis.DF502048.1                        5908  7 -     13118 t----------------------t--t------------aaa-----g
i Balaenoptera_bonaerensis.DF502048.1                   I 2 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   43772  7 -     72089 T----------------------C--T------------A-----AAG
i Beatragus_hunteri.BeaHun_scaffold_21644               I 5 C 0
s Bison_bison.KN264915.1                                  6560388  7 +   6870073 T----------------------C--T------------A-----AAG
i Bison_bison.KN264915.1                                I 1 C 0
s Bos_indicus.CM003021.1                                138140503  7 - 161108492 T----------------------C--T------------A-----AAG
i Bos_indicus.CM003021.1                                I 5 C 0
s Bos_mutus.JH883513.1                                     573044  7 -    998990 T----------------------C--T------------A-----AAG
i Bos_mutus.JH883513.1                                  I 5 C 0
s Bos_taurus.CM000177.6                                 136296236  7 - 158972876 T----------------------C--T------------A-----AAG
i Bos_taurus.CM000177.6                                 I 5 C 0
s Bubalus_bubalis.KI419065.1                              1233316  7 -   1914593 T----------------------C--T------------A-----AAG
i Bubalus_bubalis.KI419065.1                            I 5 C 0
s Cacajao_ayresi.k141_724503                               114574  5 -    171031 T----------------------T--A------------A-------G
i Cacajao_ayresi.k141_724503                            I 2 C 0
s Cacajao_calvus.k141_96166                                 13603  5 +    125063 T----------------------T--A------------A-------G
i Cacajao_calvus.k141_96166                             I 2 C 0
s Cacajao_hosomi.k141_303789                                15646  5 -    216513 T----------------------T--A------------A-------G
i Cacajao_hosomi.k141_303789                            I 2 C 0
s Cacajao_melanocephalus.k141_1160263                        8189  5 -    134917 T----------------------T--A------------A-------G
i Cacajao_melanocephalus.k141_1160263                   I 2 C 0
s Camelus_bactrianus.KN276303.1                           3220107  7 -   8989139 t----------------------t--t------------aaa-----g
i Camelus_bactrianus.KN276303.1                         I 2 C 0
s Camelus_dromedarius.KN271192.1                           397808  7 -  15254737 t----------------------t--t------------aaa-----g
i Camelus_dromedarius.KN271192.1                        I 2 C 0
s Camelus_ferus.KB016973.1                                2973544  7 +   6889770 t----------------------t--t------------aaa-----g
i Camelus_ferus.KB016973.1                              I 2 C 0
s CanFam4.chr31                                          11520010  7 +  39901454 T----------------------T--A------------A-----AAG
i CanFam4.chr31                                         I 1 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   15035  7 +     87036 T----------------------T--A------------A-----AAG
i Canis_lupus_VD.CanFam_VD_scaffold_16982               I 1 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11266677  7 -  35597290 t----------------------t--a------------aaa-----g
i Canis_lupus_dingo.QKWQ01001993.1                      I 1 C 0
s Canis_lupus_familiaris.chr31                           11089211  7 +  39895921 t----------------------t--a------------aaa-----g
i Canis_lupus_familiaris.chr31                          I 1 C 0
s Canis_lupus_orion.HG994411.1                           16456226  7 -  44759192 t----------------------t--a------------aaa-----g
i Canis_lupus_orion.HG994411.1                          I 1 C 0
s Capra_aegagrus.CM003214.1                              21325737  7 + 157394656 T----------------------C--T------------A-----AAG
i Capra_aegagrus.CM003214.1                             I 5 C 0
s Capra_hircus.CM004562.1                               135706965  7 - 157403528 T----------------------C--T------------A-----AAG
i Capra_hircus.CM004562.1                               I 5 C 0
s Carlito_syrichta.NW_007248099.1                          309582  5 +    345090 T----------------------C--A------------G-------G
i Carlito_syrichta.NW_007248099.1                       I 1 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               60267  3 +     67245 T----------------------T--A---------------------
i Carollia_perspicillata.CarPer_scaffold_4436           I 2 I 7
s Castor_canadensis.CasCan_scaffold_47037                   31659  7 +     33760 T----------------------A--T------------A-----AAG
i Castor_canadensis.CasCan_scaffold_47037               I 2 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   159421  7 -    276539 T----------------------T--T------------A-----AAA
i Catagonus_wagneri.CatWag_scaffold_1305                I 1 C 0
s Cavia_aperea.AVPZ01000278.1                            15787188  4 -  24422027 T----------------------A--A------------A--------
i Cavia_aperea.AVPZ01000278.1                           C 0 I 2
s Cavia_porcellus.DS562889.1                             15799124  4 -  24440124 T----------------------A--A------------A--------
i Cavia_porcellus.DS562889.1                            C 0 I 2
s Cavia_tschudii.CavTsc_scaffold_488                       177315  4 +    436027 T----------------------A--A------------A--------
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 I 2
s Cebus_albifrons.Contig22                               18891416  5 -  29618158 T----------------------T--A------------A-------G
i Cebus_albifrons.Contig22                              I 2 C 0
s Cebus_olivaceus.k141_93739                                 8960  5 -     26817 T----------------------T--A------------A-------G
i Cebus_olivaceus.k141_93739                            I 2 C 0
s Cebus_unicolor.k141_239009                                13203  5 +     25043 T----------------------T--A------------A-------G
i Cebus_unicolor.k141_239009                            I 2 C 0
s Cephalopachus_bancanus.k141_702587                         8606  5 +     21754 T----------------------C--A------------G-------G
i Cephalopachus_bancanus.k141_702587                    I 1 C 0
s Ceratotherium_simum.JH767818.1                          4364430  7 +   7569818 t----------------------t--t------------aaa-----g
i Ceratotherium_simum.JH767818.1                        I 6 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         4187  7 -      9338 T----------------------T--T------------A-----AAG
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    I 6 C 0
s Cercocebus_atys.KQ010443.1                              6555858  5 +   6739814 t----------------------t--c------------a-------g
i Cercocebus_atys.KQ010443.1                            I 2 C 0
s Cercocebus_chrysogaster.k141_2328246                      27335  5 +     60454 T----------------------T--C------------A-------G
i Cercocebus_chrysogaster.k141_2328246                  I 2 C 0
s Cercocebus_lunulatus.k141_4634644                          2541  5 -     21101 T----------------------T--C------------A-------G
i Cercocebus_lunulatus.k141_4634644                     I 2 C 0
s Cercocebus_torquatus.k141_3969582                         59850  5 -    107033 T----------------------T--C------------A-------G
i Cercocebus_torquatus.k141_3969582                     I 2 C 0
s Cercopithecus_ascanius.k141_4123525                        2740  5 -     17608 T----------------------T--C------------A-------G
i Cercopithecus_ascanius.k141_4123525                   I 2 C 0
s Cercopithecus_cephus.k141_598190                          30236  5 +     30494 T----------------------T--C------------A-------G
i Cercopithecus_cephus.k141_598190                      I 2 C 0
s Cercopithecus_diana.k141_2980617                          59081  5 -     59240 T----------------------T--C------------A-------G
i Cercopithecus_diana.k141_2980617                      I 2 C 0
s Cercopithecus_hamlyni.k141_129805                          2782  5 +     16677 T----------------------T--C------------A-------G
i Cercopithecus_hamlyni.k141_129805                     I 2 C 0
s Cercopithecus_lowei.k141_623764                           24941  5 +     35983 T----------------------T--C------------A-------G
i Cercopithecus_lowei.k141_623764                       I 2 C 0
s Cercopithecus_albogularis.ctg51                              11991467  5 +  12117833 T----------------------T--C------------A-------G
i Cercopithecus_albogularis.ctg51                             I 2 C 0
s Cercopithecus_mona.ctg12                               46478227  5 +  46592721 T----------------------T--C------------A-------G
i Cercopithecus_mona.ctg12                              I 2 C 0
s Cercopithecus_neglectus.k141_2078027                      41777  5 -     45581 T----------------------T--C------------A-------G
i Cercopithecus_neglectus.k141_2078027                  I 2 C 0
s Cercopithecus_nictitans.k141_1129315                       2783  5 +     35577 T----------------------T--C------------A-------G
i Cercopithecus_nictitans.k141_1129315                  I 2 C 0
s Cercopithecus_petaurista.k141_64532                        2558  5 -     25661 T----------------------T--C------------A-------G
i Cercopithecus_petaurista.k141_64532                   I 2 C 0
s Cercopithecus_pogonias.k141_3109732                        2536  5 -     17744 T----------------------T--C------------A-------G
i Cercopithecus_pogonias.k141_3109732                   I 2 C 0
s Cercopithecus_roloway.k141_2263608                        22153  5 +     37128 T----------------------T--C------------A-------G
i Cercopithecus_roloway.k141_2263608                    I 2 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           3314  2 -      6963 A----------------------G------------------------
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           59743  4 -     68416 -----------------------A--A------------A-------G
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            8791  4 +     13308 -----------------------A--A------------A-------G
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             6231  5 -     18223 T----------------------T--A------------A-------G
i Cheracebus_lucifer.k141_619653                        I 2 C 0
s Cheracebus_lugens.k141_203936                             23249  5 +     25473 T----------------------T--A------------A-------G
i Cheracebus_lugens.k141_203936                         I 2 C 0
s Cheracebus_regulus.k141_2128895                           42289  5 +     57117 T----------------------T--A------------A-------G
i Cheracebus_regulus.k141_2128895                       I 2 C 0
s Cheracebus_torquatus.k141_315545                          46968  5 +     54541 T----------------------T--A------------A-------G
i Cheracebus_torquatus.k141_315545                      I 2 C 0
s Chinchilla_lanigera.JH721867.1                         15962277  4 +  43084221 t----------------------t--a------------a--------
i Chinchilla_lanigera.JH721867.1                        I 2 I 2
s Chiropotes_israelita.k141_1189915                         71775  5 +    196370 T----------------------T--A------------A-------A
i Chiropotes_israelita.k141_1189915                     I 2 C 0
s Chiropotes_sagulatus.k141_773804                          15955  5 +     40510 T----------------------T--A------------A-------A
i Chiropotes_sagulatus.k141_773804                      I 2 C 0
s Chlorocebus_aethiops.ctg22                             15140146  5 -  15256731 T----------------------T--C------------A-------G
i Chlorocebus_aethiops.ctg22                            I 2 C 0
s Chlorocebus_pygerythrus.k141_1486215                      34761  5 -     53260 T----------------------T--C------------A-------G
i Chlorocebus_pygerythrus.k141_1486215                  I 2 C 0
s Chlorocebus_sabaeus.CM001963.2                        101145314  5 + 101219884 t----------------------t--c------------a-------g
i Chlorocebus_sabaeus.CM001963.2                        I 2 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                17006  7 -     21363 T----------------------T--T------------A-----AAG
i Choloepus_didactylus.ChoDid_scaffold_36182            I 1 C 0
s Choloepus_hoffmanni.KN194586.1                           762311  7 +    964067 t----------------------t--t------------aaa-----g
i Choloepus_hoffmanni.KN194586.1                        I 3 C 0
s Colobus_angolensis.KN985967.1                          10887078  5 +  10971483 t----------------------t--c------------a-------g
i Colobus_angolensis.KN985967.1                         I 2 C 0
s Colobus_guereza.LG08                                  147665243  5 + 156195979 T----------------------T--C------------A-------G
i Colobus_guereza.LG08                                  I 2 C 0
s Colobus_polykomos.k141_1406057                            17228  5 +     23629 T----------------------T--C------------A-------G
i Colobus_polykomos.k141_1406057                        I 2 C 0
s Condylura_cristata.JH655880.1                          60614138  7 +  78930452 t----------------------t--t------------aaa-----g
i Condylura_cristata.JH655880.1                         I 2 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 279081  7 -    399297 C----------------------T--C------------A-----AAG
i Cricetomys_gambianus.CriGam_scaffold_949              I 2 C 0
s Cricetulus_griseus.LT883672.1                          53029756  7 +  72327488 T----------------------T--C------------A-----AAG
i Cricetulus_griseus.LT883672.1                         I 2 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            52568  7 -     70449 T----------------------T--T------------A-----AAG
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 1 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  208969 11 -    956709 T----------------------G--T------------A-ATAGTGG
i Ctenodactylus_gundi.CteGun_scaffold_447               I 2 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 31622  4 -     67205 T----------------------T--A------------A--------
i Ctenomys_sociabilis.CteSoc_scaffold_19489             I 2 I 2
s Cuniculus_paca.CunPac_flattened_line_16637                18318  4 +     26546 T----------------------A--A------------A--------
i Cuniculus_paca.CunPac_flattened_line_16637            I 2 I 2
s Dasyprocta_punctata.DasPun_flattened_line_634             59410  4 -    236241 T----------------------A--A------------A--------
i Dasyprocta_punctata.DasPun_flattened_line_634         I 2 I 2
s Dasypus_novemcinctus.JH568778.1                          184181  7 -   6883506 t----------------------t--t------------aaa-----g
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16845613  5 +  31942871 T----------------------A--A------------A-------G
i Daubentonia_madagascariensis.ctg11                    I 1 C 0
s Delphinapterus_leucas.KZ290064.1                       80037360  7 -  96802777 t----------------------t--t------------aaa-----g
i Delphinapterus_leucas.KZ290064.1                      I 2 C 0
s Desmodus_rotundus.KZ672188.1                           18699546  3 -  18957592 t----------------------t--t---------------------
i Desmodus_rotundus.KZ672188.1                          I 2 I 7
s Dicerorhinus_sumatrensis.PEKH010003161.1                 323082  7 +    993696 t----------------------t--t------------aaa-----g
i Dicerorhinus_sumatrensis.PEKH010003161.1              I 5 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   3734  7 +    151128 T----------------------T--T------------A-----AAG
i Diceros_bicornis.DicBicMic_scaffold_9545              I 6 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   157545  4 +    228994 T----------------------A--A------------A--------
i Dinomys_branickii.DinBra_scaffold_1996                I 2 I 2
s Dipodomys_ordii.KN672545.1                              3656908  8 +   4240102 T----------------------T--G------------A----AAGC
i Dipodomys_ordii.KN672545.1                            I 2 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 28551  8 +     28912 T----------------------T--G------------A----AAGC
i Dipodomys_stephensi.DipSte_scaffold_44365             I 2 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                36634  4 -     73477 T----------------------A--A------------A--------
i Dolichotis_patagonum.DolPat_scaffold_14102            I 2 I 2
s Echinops_telfairi.JH980316.1                           22999467 13 -  44670279 g------------------ttgttgtt------------c-----ttt
i Echinops_telfairi.JH980316.1                          I 1 C 0
s Eidolon_helvum.KE772537.1                                 12793 12 +     24177 t----------------------t--a------------aaaaaaaag
i Eidolon_helvum.KE772537.1                             I 1 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1492002  7 +   1727528 T----------------------C--T------------A-----AAG
i Elaphurus_davidianus.JRFZ01086400.1                   I 1 C 0
s Elephantulus_edwardii.JH947210.1                        7816983  9 +  15467074 TTT--------------------C--C------------A-----AAA
i Elephantulus_edwardii.JH947210.1                      I 2 I 12417
s Enhydra_lutris.KZ291749.1                              85872742  7 +  99434291 t----------------------t--t------------aaa-----g
i Enhydra_lutris.KZ291749.1                             I 4 C 0
s Eptesicus_fuscus.JH977687.1                             4705114  6 +   6522550 c-------------------agat--t---------------------
i Eptesicus_fuscus.JH977687.1                           I 6 I 7
s Equus_asinus.JREZ01000062.1                             5853527  7 -   7175178 t----------------------c--t------------aaa-----g
i Equus_asinus.JREZ01000062.1                           I 2 C 0
s Equus_caballus.CM000402.2                              13352032  7 +  41866177 t----------------------c--t------------aaa-----g
i Equus_caballus.CM000402.2                             I 2 C 0
s Equus_przewalskii.ATBW01073585.1                          13521  7 +     92910 t----------------------c--t------------aaa-----g
i Equus_przewalskii.ATBW01073585.1                      I 2 C 0
s Erinaceus_europaeus.JH835290.1                         11534814  2 +  16010500 T----------------------C------------------------
i Erinaceus_europaeus.JH835290.1                        I 2 C 0
s Erythrocebus_patas.Contig8                             48776196  5 -  48907691 T----------------------T--C------------A-------G
i Erythrocebus_patas.Contig8                            I 2 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          315576  7 +    330699 T----------------------T--T------------A-----AAG
i Eschrichtius_robustus.EscRob_flattened_line_685       I 2 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             62029  7 +     89355 T----------------------T--T------------A-----AAG
i Eubalaena_japonica.EubJap_flattened_line_7756         I 2 C 0
s Eulemur_albifrons.k141_715837                              5785  9 +     13586 TTTT-------------------T-TA------------A-------G
i Eulemur_albifrons.k141_715837                         I 1 C 0
s Eulemur_collaris.k141_311830                               5718  8 -      6809 TTT--------------------T-TA------------A-------G
i Eulemur_collaris.k141_311830                          I 4 C 0
s Eulemur_coronatus.k141_3240342                            12192  8 +     36558 TTTT-------------------T--A------------A-------G
i Eulemur_coronatus.k141_3240342                        I 1 C 0
s Eulemur_flavifrons.k141_903901                             8513  8 +     60246 TTTT-------------------T--A------------A-------G
i Eulemur_flavifrons.k141_903901                        I 1 C 0
s Eulemur_fulvus.k141_653297                                11990  9 +    109717 TTTT-------------------T-TA------------A-------G
i Eulemur_fulvus.k141_653297                            I 1 C 0
s Eulemur_macaco.k141_1341545                               16375  8 +     16540 TTTT-------------------T--A------------A-------G
i Eulemur_macaco.k141_1341545                           I 1 C 0
s Eulemur_mongoz.k141_825972                                16651  8 +     27497 TTTT-------------------T--A------------A-------G
i Eulemur_mongoz.k141_825972                            I 1 C 0
s Eulemur_rubriventer.k141_411740                           19107  8 +     26808 TTTT-------------------T--A------------A-------G
i Eulemur_rubriventer.k141_411740                       I 1 C 0
s Eulemur_rufus.k141_1620292                                33848  5 +     46535 -----------------------T-TA------------A-------G
i Eulemur_rufus.k141_1620292                            I 3 C 0
s Eulemur_sanfordi.k141_186399                              16570  9 -     29447 TTTT-------------------T-TA------------A-------G
i Eulemur_sanfordi.k141_186399                          I 1 C 0
s Felis_catus.CM001386.2                                129893487  7 - 159252932 t----------------------t--t------------aaa-----a
i Felis_catus.CM001386.2                                I 1 C 0
s Felis_catus_fca126.CM031420.1                         129280579  7 - 158578461 t----------------------t--t------------aaa-----a
i Felis_catus_fca126.CM031420.1                         I 1 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 21719  7 +     52776 T----------------------T--T------------A-----AAA
i Felis_nigripes.FelNig_flattened_line_8080             I 1 C 0
s Galago_moholi.ctg555                                     211638  5 -    847004 T----------------------A--A------------A-------G
i Galago_moholi.ctg555                                  I 1 C 0
s Galago_senegalensis.k141_964197                           14012  5 -     43889 T----------------------A--A------------A-------G
i Galago_senegalensis.k141_964197                       I 1 C 0
s Galagoides_demidoff.k141_1769638                          11078  5 +     27357 T----------------------A--A------------A-------G
i Galagoides_demidoff.k141_1769638                      I 1 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               156847  7 +    324696 T----------------------T--A------------A-----AAG
i Galeopterus_variegatus.GalVar_scaffold_354            I 1 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    181807  7 -    189561 C----------------------C--T------------A-----AAG
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 5 C 0
s Glis_glis.GliGli_scaffold_79770                           14304  7 -     18683 T----------------------T--T------------A-----AAG
i Glis_glis.GliGli_scaffold_79770                       I 2 C 0
s Gorilla_beringei.k141_111300                               5915  5 -     14630 T----------------------T--A------------A-------G
i Gorilla_beringei.k141_111300                          I 2 C 0
s Gorilla_gorilla.LT578340.1                            119653015  5 - 195582420 t----------------------t--a------------a-------g
i Gorilla_gorilla.LT578340.1                            I 2 C 0
s Hapalemur_alaotrensis.k141_1280836                         2572  8 +     10286 TTTT-------------------T--A------------A-------G
i Hapalemur_alaotrensis.k141_1280836                    I 1 C 0
s Hapalemur_gilberti.k141_279011                             1052  8 -     11661 TTTT-------------------T--A------------A-------G
i Hapalemur_gilberti.k141_279011                        I 6 C 0
s Hapalemur_griseus.k141_1387522                             6378  8 +     56096 TTTT-------------------T--A------------A-------G
i Hapalemur_griseus.k141_1387522                        I 1 C 0
s Hapalemur_meridionalis.k141_186231                        29627  8 -     42470 TTTT-------------------T--A------------A-------G
i Hapalemur_meridionalis.k141_186231                    I 1 C 0
s Hapalemur_occidentalis.k141_797938                        46255  8 -     54384 TTTT-------------------T--A------------A-------G
i Hapalemur_occidentalis.k141_797938                    I 1 C 0
s Helogale_parvula.HelPar_flattened_line_22962              17766  7 +     53719 T----------------------T--T------------A-----AAG
i Helogale_parvula.HelPar_flattened_line_22962          I 1 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                28022  7 -     91191 T----------------------C--T------------A-----AAG
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 5 C 0
s Heterocephalus_glaber.JH602058.1                        2551641  4 +  31725842 t----------------------a--a------------a--------
i Heterocephalus_glaber.JH602058.1                      I 2 I 2
s Hippopotamus_amphibius.HipAmp_scaffold_1308              147665  7 +    277961 T----------------------T--T------------A-----AAG
i Hippopotamus_amphibius.HipAmp_scaffold_1308           I 2 C 0
s Hipposideros_armiger.JXIK01001085.1                      278943  7 -    477199 t----------------------t--t------------aaa-----g
i Hipposideros_armiger.JXIK01001085.1                   I 8 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              8093  7 -      9143 T----------------------T--T------------A-----AAG
i Hipposideros_galeritus.HipGal_scaffold_104691         I 11 C 0
s Hoolock_leuconedys.ctg79                                      5602  5 -   7690867 T----------------------T--A------------A-------G
i Hoolock_leuconedys.ctg79                                 I 2 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 17843  7 -     67322 T----------------------T--T------------A-----AAG
i Hyaena_hyaena.HyaHya_flattened_line_20729             I 1 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19543  4 -    119109 T----------------------A--A------------A--------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       I 2 I 2
s Hylobates_abbotti.k141_493872                              5750  5 +      5897 T----------------------T--A------------A-------G
i Hylobates_abbotti.k141_493872                         I 76 C 0
s Hylobates_agilis.k141_1878600                               643  5 -      1230 T----------------------T--A------------A-------G
i Hylobates_agilis.k141_1878600                         I 2 C 0
s Hylobates_pileatus_b.ContigUN                                 14625296  5 -  25970782 T----------------------T--A------------A-------G
i Hylobates_pileatus_b.ContigUN                                I 2 C 0
s Hylobates_muelleri.k141_1389047                            2552  5 -      2977 G----------------------T--A------------A-------G
i Hylobates_muelleri.k141_1389047                       I 2 C 0
s Hylobates_pileatus_a.tarseq_592                             34455  5 -     60944 T----------------------T--A------------A-------G
i Hylobates_pileatus_a.tarseq_592                         I 2 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     6711  4 +     22540 T----------------------T--A------------A--------
i Hystrix_cristata.HysCri_scaffold_50788                I 2 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7126400  7 +  13083262 t----------------------t--t------------aaa-----g
i Ictidomys_tridecemlineatus.JH393315.1                 I 3 C 0
s Indri_indri.k141_5141390                                   1101  5 -      3181 A----------------------A--A------------A-------A
i Indri_indri.k141_5141390                              I 1 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               9565  7 +     17520 T----------------------T--T------------A-----AAG
i Inia_geoffrensis.IniGeo_flattened_line_66725          I 2 C 0
s Jaculus_jaculus.JH725517.1                              8566483  4 +  11848649 T----------------------C--T------------A--------
i Jaculus_jaculus.JH725517.1                            I 2 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               24172  7 +     37189 T----------------------T--T------------A-----AAG
i Kogia_breviceps.KogBre_flattened_line_35920           I 2 C 0
s Lagothrix_lagothricha.k141_12968                          50806  5 -    147782 T----------------------T--A------------A-------G
i Lagothrix_lagothricha.k141_12968                      I 2 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                     867  3 +     26176 t----------------------t--a---------------------
i Lasiurus_borealis.LasBor_scaffold_59542               I 2 I 7
s Lemur_catta.scaffold_1                                258407934  8 - 285822530 TTTT-------------------T--A------------A-------G
i Lemur_catta.scaffold_1                                I 1 C 0
s Lepilemur_ankaranensis.k141_884009                        24687  5 +     39228 A----------------------A--A------------A-------G
i Lepilemur_ankaranensis.k141_884009                    I 1 C 0
s Lepilemur_dorsalis.k141_134267                            54073  5 +     63517 T----------------------A--A------------A-------G
i Lepilemur_dorsalis.k141_134267                        I 1 C 0
s Lepilemur_ruficaudatus.k141_617879                        79335  5 +    116806 A----------------------A--A------------A-------G
i Lepilemur_ruficaudatus.k141_617879                    I 1 C 0
s Lepilemur_septentrionalis.k141_578524                     32326  5 -     33031 A----------------------A--A------------A-------G
i Lepilemur_septentrionalis.k141_578524                 I 1 C 0
s Leptonychotes_weddellii.KB714749.1                      3086528  7 -   3498232 t----------------------t--a------------aaa-----g
i Leptonychotes_weddellii.KB714749.1                    I 1 C 0
s Lepus_americanus.LepAme_scaffold_62849                    13815 12 +     22452 T----------------------T--T-------AAATTA-----AAT
i Lepus_americanus.LepAme_scaffold_62849                I 2 C 0
s Lipotes_vexillifer.KE558548.1                            136522  7 +   3060487 t----------------------t--t------------aaa-----g
i Lipotes_vexillifer.KE558548.1                         I 2 C 0
s Lophocebus_aterrimus.ctg55                             19248952  5 +  19376315 T----------------------T--C------------A-------G
i Lophocebus_aterrimus.ctg55                            I 2 C 0
s Loris_lydekkerianus.k141_550999                           11381  5 +     84689 T----------------------A--A------------A-------G
i Loris_lydekkerianus.k141_550999                       I 1 C 0
s Loris_tardigradus.ctg97                                 3779130  5 +   6799190 T----------------------A--A------------A-------G
i Loris_tardigradus.ctg97                               I 1 C 0
s Loxodonta_africana.GL010040.1                          20595357  7 -  62548349 t----------------------t--t------------aaa-----g
i Loxodonta_africana.GL010040.1                         I 3 C 0
s Lycaon_pictus.CM007556.1                               11088667  7 +  39895028 t----------------------t--a------------aaa-----g
i Lycaon_pictus.CM007556.1                              I 1 C 0
s Macaca_arctoides.k141_2201161                             20687  5 +     74745 T----------------------T--C------------A-------G
i Macaca_arctoides.k141_2201161                         I 2 C 0
s Macaca_assamensis.Contig65                             12707144  5 +  12821369 T----------------------T--C------------A-------G
i Macaca_assamensis.Contig65                            I 2 C 0
s Macaca_cyclopis.k119_893486                                2786  5 -      3136 T----------------------T--C------------A-------G
i Macaca_cyclopis.k119_893486                           I 2 C 0
s Macaca_fascicularis.k141_155037                           47601  5 +     63263 T----------------------T--C------------A-------G
i Macaca_fascicularis.k141_155037                       I 2 C 0
s Macaca_fuscata.k119_599327                                 2309  5 -      2568 T----------------------T--C------------A-------G
i Macaca_fuscata.k119_599327                            I 2 C 0
s Macaca_leonina.k141_467472                                 2894  5 -      7381 T----------------------T--C------------A-------G
i Macaca_leonina.k141_467472                            I 2 C 0
s Macaca_maura.k141_251854                                  46111  5 -     79256 T----------------------T--C------------A-------G
i Macaca_maura.k141_251854                              I 2 C 0
s Macaca_mulatta.NC_041755.1                            196036218  5 + 196197964 t----------------------t--c------------a-------g
i Macaca_mulatta.NC_041755.1                            I 2 C 0
s Macaca_nemestrina.KQ004885.1                           11446388  5 +  11645122 t----------------------t--c------------a-------g
i Macaca_nemestrina.KQ004885.1                          I 2 C 0
s Macaca_nigra.k141_282495                                   5058  5 -     46448 T----------------------T--C------------A-------G
i Macaca_nigra.k141_282495                              I 2 C 0
s Macaca_radiata.k141_3680256                                2732  5 -     13212 T----------------------T--C------------A-------G
i Macaca_radiata.k141_3680256                           I 2 C 0
s Macaca_siberu.k141_741907                                 16411  5 -     55006 T----------------------T--C------------A-------G
i Macaca_siberu.k141_741907                             I 2 C 0
s Macaca_silenus.Contig12                                43841527  5 +  43892939 T----------------------T--C------------A-------G
i Macaca_silenus.Contig12                               I 2 C 0
s Macaca_thibetana.k99_662710                               17697  5 -     24607 T----------------------T--C------------A-------G
i Macaca_thibetana.k99_662710                           I 2 C 0
s Macaca_tonkeana.k141_2870633                               5063  5 -     27140 T----------------------T--C------------A-------G
i Macaca_tonkeana.k141_2870633                          I 2 C 0
s Mandrillus_leucophaeus.scaffold125                     43438112  5 -  43563597 T----------------------T--C------------A-------G
i Mandrillus_leucophaeus.scaffold125                    I 2 C 0
s Mandrillus_sphinx.Contig144                             4450932  5 -   4543643 T----------------------T--C------------A-------G
i Mandrillus_sphinx.Contig144                           I 2 C 0
s Manis_javanica.JSZB01003966.1                            146613  7 +    252755 t----------------------t--t------------aaa-----g
i Manis_javanica.JSZB01003966.1                         I 3 C 0
s Manis_pentadactyla.KN017078.1                             36756  7 +     58827 t----------------------t--t------------aaa-----g
i Manis_pentadactyla.KN017078.1                         I 3 C 0
s Marmota_marmota.CZRN01000005.1                         36874219  7 +  64221397 T----------------------T--T------------A-----AAG
i Marmota_marmota.CZRN01000005.1                        I 3 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             1554  7 -     87323 T----------------------T--T------------A-----AAG
i Mellivora_capensis.MelCap_flattened_line_15433        I 4 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               13478  7 +     15977 T----------------------T--C------------A-----AAG
i Meriones_unguiculatus.MerUng_scaffold_52233           I 2 C 0
s Mesocricetus_auratus.KB708139.1                         1047442  7 -  26018355 T----------------------T--C------------A-----AAG
i Mesocricetus_auratus.KB708139.1                       I 2 C 0
s Mesoplodon_bidens.MesBid_scaffold_227248                    849  7 -      1377 T----------------------T--T------------A-----AAG
i Mesoplodon_bidens.MesBid_scaffold_227248              I 2 C 0
s Microcebus_murinus.CM007691.1                          16510960  4 +  47401472 -----------------------a--a------------a-------a
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  35464 11 -     48017 TCT------------------ATT--T------------T-----TTT
i Microgale_talazaci.MicTal_scaffold_34660              I 1 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               23458  3 -     32043 T----------------------T--T---------------------
i Micronycteris_hirsuta.MicHir_scaffold_37978           I 2 I 7
s Miniopterus_natalensis.LDJU01000022.1                   8210616 19 +  10048721 t----------------------t--tgttttgttttttaaa-----g
i Miniopterus_natalensis.LDJU01000022.1                 I 2 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            35105 19 +     45743 T----------------------T--TGTTTTGTTTTTTA-----AAG
i Miniopterus_schreibersii.MinSch_scaffold_24116        I 2 C 0
s Miopithecus_ogouensis.k141_2935907                         2661  5 +     29742 T----------------------T--C------------A-------G
i Miopithecus_ogouensis.k141_2935907                    I 2 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        12044  7 -    104932 T----------------------T--A------------A-----AAG
i Mirounga_angustirostris.MirAng_flattened_line_8852    I 1 C 0
s Mirza_zaza.k141_226143                                     6349  4 +      8497 -----------------------A--A------------A-------G
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 146950  7 +    154973 T----------------------T--T------------A-----AAG
i Monodon_monoceros.MonMon_M_scaffold_5598              I 2 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                161978  3 +    265003 T----------------------T--C---------------------
i Mormoops_blainvillei.MorMeg_scaffold_2952             I 2 I 9
s Moschus_moschiferus.MosMos_scaffold_78805                  2037  7 -     19904 T----------------------C--T------------A-----AAG
i Moschus_moschiferus.MosMos_scaffold_78805             I 4 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  145461  7 -    168139 T----------------------T--T------------A-----AAG
i Mungos_mungo.MunMun_flattened_line_8729               I 1 C 0
s Murina_feae.MurFea_scaffold_2254                          20076  3 -    100666 G----------------------T--A---------------------
i Murina_feae.MurFea_scaffold_2254                      C 0 I 7
s Mus_caroli.LT608236.1                                  70767089  7 +  92629107 t----------------------t--c------------aaa-----g
i Mus_caroli.LT608236.1                                 I 2 C 0
s Mus_musculus.chr16                                     75490149  7 +  98207768 T----------------------T--C------------A-----AAG
i Mus_musculus.chr16                                    I 2 C 0
s Mus_pahari.LT608305.1                                  67556377  7 +  89017189 t----------------------t--c------------aaa-----g
i Mus_pahari.LT608305.1                                 I 2 C 0
s Mus_spretus.CM004110.1                                 74331324  7 +  97876770 t----------------------t--c------------aaa-----g
i Mus_spretus.CM004110.1                                I 2 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             12583  4 +     98495 T----------------------C--T------------A--------
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 2 I 233
s Mustela_putorius.JH417978.1                             4424922  7 -  28371801 t----------------------t--t------------aaa-----g
i Mustela_putorius.JH417978.1                           I 3 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     90661  4 -    117718 T----------------------T--A------------A--------
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 2 I 2
s Myotis_brandtii.KE161952.1                               968608  3 +   8389877 t----------------------t--a---------------------
i Myotis_brandtii.KE161952.1                            I 2 I 7
s Myotis_davidii.KB114863.1                               5020283  3 +   6462685 t----------------------t--a---------------------
i Myotis_davidii.KB114863.1                             I 2 I 7
s Myotis_lucifugus.GL429887.1                             3466192  3 -   3747815 T----------------------T--A---------------------
i Myotis_lucifugus.GL429887.1                           I 2 I 7
s Myotis_myotis.MyoMyo_scaffold_6123                        11402  3 +     66751 T----------------------T--A---------------------
i Myotis_myotis.MyoMyo_scaffold_6123                    I 2 I 7
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             5574  7 -      8794 T----------------------T--T------------A-----TAG
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        I 1 C 0
s Nasalis_larvatus.k141_153429                               9168  5 +     48152 T----------------------T--C------------A-------G
i Nasalis_larvatus.k141_153429                          I 2 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4485434  7 -  14209539 t----------------------t--a------------aaa-----g
i Neomonachus_schauinslandi.NINY01007774.1              I 1 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3951562  7 -   4490290 t----------------------t--t------------aaa-----g
i Neophocaena_asiaeorientalis.KZ688543.1                I 2 C 0
s Nomascus_annamensis.k141_720788                             550  5 -      1065 T----------------------T--A------------A-------G
i Nomascus_annamensis.k141_720788                       I 2 C 0
s Nomascus_concolor.k141_581629                               113  5 -      6578 T----------------------T--A------------A-------G
i Nomascus_concolor.k141_581629                         I 2 C 0
s Nomascus_gabriellae.k141_1004198                            421  5 +      1448 T----------------------T--A------------A-------G
i Nomascus_gabriellae.k141_1004198                      I 2 C 0
s Nomascus_siki_b.tarseq_80                             25572  5 -  18771707 T----------------------T--A------------A-------G
i Nomascus_siki_b.tarseq_80                         I 2 C 0
s Nomascus_siki_a.k141_595747                                  3275  5 +      4512 T----------------------T--A------------A-------G
i Nomascus_siki_a.k141_595747                             I 2 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                31468  7 +   3668941 t----------------------t--a------------aaa-----g
i Nyctereutes_procyonoides.CAJHUB010000786.1            I 1 C 0
s Nycticebus_bengalensis.LG16                            65567835  5 -  95554990 T----------------------A--A------------A-------G
i Nycticebus_bengalensis.LG16                           I 1 C 0
s Nycticebus_coucang.k141_2051882                            4561  5 +      6470 T----------------------A--A------------A-------G
i Nycticebus_coucang.k141_2051882                       I 1 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65670170  5 +  89412551 T----------------------A--A------------A-------G
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     I 1 C 0
s Ochotona_princeps.JH802095.1                            4996562 15 -  23139505 T----------------------C--T--------CATCA-AAATTGG
i Ochotona_princeps.JH802095.1                          I 2 C 0
s Octodon_degus.JH651621.1                                3686444  4 +  10294119 t----------------------t--a------------a--------
i Octodon_degus.JH651621.1                              I 2 I 2
s Odobenus_rosmarus.KB229369.1                             680101  7 -   3126709 t----------------------t--a------------aaa-----g
i Odobenus_rosmarus.KB229369.1                          I 2 C 0
s Odocoileus_virginianus.KZ101650.1                       1080217  7 +   1425656 T----------------------A--T------------A-----AAG
i Odocoileus_virginianus.KZ101650.1                     I 1 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         37535  7 +     78940 T----------------------C--T------------A-----AAG
i Okapia_johnstoni.LVCL01S0017931.1                     I 5 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  37633  7 +     62360 T----------------------T--C------------A-----AAG
i Onychomys_torridus.OnyTor_scaffold_12578              I 2 C 0
s Orcinus_orca.KB316965.1                                 7225247  7 -   7562323 t----------------------t--t------------aaa-----g
i Orcinus_orca.KB316965.1                               I 2 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              58586  9 -     66828 TGT--------------------T--T------------A-----AAA
i Orycteropus_afer.OryAfe_flattened_line_13509          I 8 I 1901
s Oryctolagus_cuniculus.CM000803.1                      141876852 12 + 163896628 t----------------------t--taaatt-------aaa-----g
i Oryctolagus_cuniculus.CM000803.1                      I 5 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      308752  7 -    505867 t----------------------t--a------------aaa-----g
i Otocyon_megalotis.JAEUCK010005121.1                   I 1 C 0
s Otolemur_crassicaudatus.k141_505435                        1453  5 -     53940 T----------------------A--A------------A-------G
i Otolemur_crassicaudatus.k141_505435                   I 1 C 0
s Otolemur_garnettii.GL873528.1                          18009434  5 -  38779656 t----------------------a--a------------a-------g
i Otolemur_garnettii.GL873528.1                         I 1 C 0
s Ovis_aries.CM001582.2                                 134077813  7 - 275406953 T----------------------C--T------------A-----AAG
i Ovis_aries.CM001582.2                                 I 5 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      79028  7 +    140051 T----------------------C--T------------A-----AAG
i Ovis_canadensis.OviCan_scaffold_6251                  I 5 C 0
s Pan_paniscus.CM003386.1                               127575281  5 - 205426864 t----------------------t--a------------a-------g
i Pan_paniscus.CM003386.1                               I 2 I 3
s Pan_troglodytes.CM009241.2                            120152435  5 - 196562556 t----------------------t--a------------a-------g
i Pan_troglodytes.CM009241.2                            I 2 I 3
s Panthera_onca.PanOnc_flattened_line_1615                  34857  7 +    295523 T----------------------T--T------------A-----AAA
i Panthera_onca.PanOnc_flattened_line_1615              I 1 C 0
s Panthera_pardus.KV860323.1                              3638591  7 +  18214204 t----------------------t--t------------aaa-----a
i Panthera_pardus.KV860323.1                            I 1 C 0
s Panthera_tigris.KE721879.1                              5028266  7 -   6340057 t----------------------t--t------------aaa-----a
i Panthera_tigris.KE721879.1                            I 1 C 0
s Pantholops_hodgsonii.KE114631.1                         1066663  7 -   1292953 T----------------------C--T------------A-----AAG
i Pantholops_hodgsonii.KE114631.1                       I 5 C 0
s Papio_anubis.CM001492.2                               188156899  5 - 188283584 t----------------------t--c------------a-------g
i Papio_anubis.CM001492.2                               I 2 C 0
s Papio_cynocephalus.k141_883042                             5216  5 +      5367 T----------------------T--C------------A-------G
i Papio_cynocephalus.k141_883042                        I 2 C 0
s Papio_hamadryas.Contig15                               47514284  5 +  47705337 T----------------------T--C------------A-------G
i Papio_hamadryas.Contig15                              I 2 C 0
s Papio_kindae.k141_5458022                                 68260  5 -    104429 T----------------------T--C------------A-------G
i Papio_kindae.k141_5458022                             I 2 C 0
s Papio_papio.k141_979496                                    6796  5 +     14967 T----------------------T--C------------A-------G
i Papio_papio.k141_979496                               I 2 C 0
s Papio_ursinus.k141_1345919                                 2655  5 -      7628 T----------------------T--C------------A-------G
i Papio_ursinus.k141_1345919                            I 2 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    116348  7 -    135482 T----------------------C--T------------A-----ATG
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 I 1 C 0
s Perodicticus_ibeanus.k141_117958                           6139  4 -     23713 -----------------------A--A------------A-------G
i Perodicticus_ibeanus.k141_117958                      I 1 C 0
s Perodicticus_potto.k141_713187                            25453  4 -     27972 -----------------------A--A------------A-------G
i Perodicticus_potto.k141_713187                        I 1 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359        590  7 +     49596 t----------------------t--t------------aaa-----C
i Perognathus_longimembris.PerPac_flattened_line_19359  I 2 C 0
s Peromyscus_maniculatus.KI615518.1                       4950880  7 -   8017169 T----------------------T--C------------A-----AAG
i Peromyscus_maniculatus.KI615518.1                     I 2 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    14171  4 -     36578 T----------------------A--A------------A--------
i Petromus_typicus.PetTyp_scaffold_33007                I 3 I 2
s Phocoena_phocoena.PhoPho_flattened_line_11948            121851  7 -    122454 T----------------------T--T------------A-----AAG
i Phocoena_phocoena.PhoPho_flattened_line_11948         I 2 C 0
s Piliocolobus_badius.k141_1987485                           2682  5 -      5908 T----------------------T--C------------A-------G
i Piliocolobus_badius.k141_1987485                      I 2 C 0
s Piliocolobus_gordonorum.k141_1270531                       3306  5 -     17985 T----------------------T--C------------A-------G
i Piliocolobus_gordonorum.k141_1270531                  I 2 C 0
s Piliocolobus_kirkii.k141_929665                            2673  5 +      7694 T----------------------T--C------------A-------G
i Piliocolobus_kirkii.k141_929665                       I 2 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26741151  5 +  26888534 t----------------------t--c------------a-------g
i Piliocolobus_tephrosceles.PDMG02000036.1              I 2 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            98459  3 +    112873 T----------------------T--A---------------------
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        I 6 I 7
s Pithecia_albicans.k141_991845                             44412  5 -     61926 T----------------------T--A------------A-------G
i Pithecia_albicans.k141_991845                         I 2 C 0
s Pithecia_chrysocephala.k141_159118                        25797  5 +     78826 T----------------------T--A------------A-------G
i Pithecia_chrysocephala.k141_159118                    I 2 C 0
s Pithecia_hirsuta.k141_1152968                              9844  5 -     15800 T----------------------T--A------------A-------G
i Pithecia_hirsuta.k141_1152968                         I 2 C 0
s Pithecia_mittermeieri.k141_2119203                        13043  5 -     16101 T----------------------T--A------------A-------G
i Pithecia_mittermeieri.k141_2119203                    I 2 C 0
s Pithecia_pissinattii.k141_1102319                          6271  5 +      9673 T----------------------T--A------------A-------G
i Pithecia_pissinattii.k141_1102319                     I 2 C 0
s Pithecia_pithecia.tarseq_313                           13475271  5 -  19735023 T----------------------T--A------------A-------G
i Pithecia_pithecia.tarseq_313                          I 2 C 0
s Pithecia_vanzolinii.k141_831006                           14174  5 -     31692 T----------------------T--A------------A-------G
i Pithecia_vanzolinii.k141_831006                       I 2 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           5938  7 +     21690 T----------------------T--T------------A-----AAG
i Platanista_gangetica.PlaMin_flattened_line_72990      I 2 C 0
s Plecturocebus_bernhardi.k141_959214                       23514  5 +     44506 T----------------------T--A------------A-------G
i Plecturocebus_bernhardi.k141_959214                   I 2 C 0
s Plecturocebus_brunneus.k141_498086                        23726  5 +     67491 T----------------------T--A------------A-------G
i Plecturocebus_brunneus.k141_498086                    I 2 C 0
s Plecturocebus_caligatus.k141_2539816                      13966  5 -     98129 T----------------------T--A------------A-------G
i Plecturocebus_caligatus.k141_2539816                  I 2 C 0
s Plecturocebus_cinerascens.k141_744510                     23566  5 +    147771 T----------------------T--A------------A-------G
i Plecturocebus_cinerascens.k141_744510                 I 2 C 0
s Plecturocebus_cupreus.k141_1145860                          202  5 -     43940 T----------------------T--A------------A-------G
i Plecturocebus_cupreus.k141_1145860                    I 2 C 0
s Plecturocebus_dubius.k141_3565563                          4285  5 -     55515 T----------------------T--A------------A-------G
i Plecturocebus_dubius.k141_3565563                     I 2 C 0
s Plecturocebus_grovesi.k141_242819                         23639  5 +    152463 T----------------------T--A------------A-------G
i Plecturocebus_grovesi.k141_242819                     I 2 C 0
s Plecturocebus_hoffmannsi.k141_985533                       1356  5 -    119457 T----------------------T--A------------A-------G
i Plecturocebus_hoffmannsi.k141_985533                  I 2 C 0
s Plecturocebus_miltoni.k141_841561                         13362  5 +    134592 T----------------------T--A------------A-------G
i Plecturocebus_miltoni.k141_841561                     I 2 C 0
s Plecturocebus_moloch.k141_890597                          23949  5 -     75465 T----------------------T--A------------A-------G
i Plecturocebus_moloch.k141_890597                      I 2 C 0
s Pongo_abelii.NDHI03003816.1                              187801  5 -    373494 t----------------------t--a------------a-------g
i Pongo_abelii.NDHI03003816.1                           I 2 C 0
s Pongo_pygmaeus.ctg62                                   19808449  5 +  19899266 T----------------------T--A------------A-------G
i Pongo_pygmaeus.ctg62                                  I 2 C 0
s Presbytis_comata.k141_672698                               6412  5 -     15069 T----------------------T--C------------A-------G
i Presbytis_comata.k141_672698                          I 2 C 0
s Presbytis_mitrata.k141_860013                              6542  5 +     14865 T----------------------T--C------------A-------G
i Presbytis_mitrata.k141_860013                         I 2 C 0
s Prolemur_simus.MPIZ01000048.1                           6849301  8 +  12164890 t-------------------tttt--a------------a-------g
i Prolemur_simus.MPIZ01000048.1                         I 1 C 0
s Propithecus_coquerelli.NW_012147863.1                     19471  5 -     30946 n----------------------n--n------------n-------n
i Propithecus_coquerelli.NW_012147863.1                 I 1 C 0
s Propithecus_coronatus.k141_1353159                         4383  3 +     11805 --------------------------A------------A-------G
i Propithecus_coronatus.k141_1353159                    I 11 C 0
s Propithecus_diadema.k141_577245                           43724  5 +     52369 A----------------------A--A------------A-------G
i Propithecus_diadema.k141_577245                       I 1 C 0
s Propithecus_edwardsi.k141_1317105                         36111  5 -     44753 A----------------------A--A------------A-------G
i Propithecus_edwardsi.k141_1317105                     I 1 C 0
s Propithecus_perrieri.k141_7554                            18034  5 +     27322 A----------------------A--A------------A-------G
i Propithecus_perrieri.k141_7554                        I 1 C 0
s Propithecus_tattersalli.k141_907138                       17668  5 -     53241 A----------------------A--A------------A-------G
i Propithecus_tattersalli.k141_907138                   I 1 C 0
s Propithecus_verreauxi.k141_158021                         39932  5 -     48185 A----------------------A--A------------A-------G
i Propithecus_verreauxi.k141_158021                     I 9 C 0
s Psammomys_obesus.NESX01026517.1                           35761  7 +     77221 t----------------------t--g------------aaa-----g
i Psammomys_obesus.NESX01026517.1                       I 2 C 0
s Pteronotus_parnellii.KE867983.1                            4618  3 -     27784 t----------------------t--t---------------------
i Pteronotus_parnellii.KE867983.1                       I 2 I 8
s Pteronura_brasiliensis.PteBra_flattened_line_1343        247233  4 -    344369 T----------------------T--T------------A--------
i Pteronura_brasiliensis.PteBra_flattened_line_1343     I 4 I 3
s Pteropus_alecto.KB031157.1                             13246530  4 -  17261082 t----------------------t--a------------a--------
i Pteropus_alecto.KB031157.1                            I 1 I 5
s Pteropus_vampyrus.KN525959.1                             604481  4 -   3946241 t----------------------t--a------------a--------
i Pteropus_vampyrus.KN525959.1                          I 1 I 5
s Puma_concolor.QAVW01000427.1                          131534871  7 - 161321710 t----------------------t--t------------aaa-----a
i Puma_concolor.QAVW01000427.1                          I 1 C 0
s Pygathrix_cinerea.k141_374971                             30533  5 +     56732 T----------------------T--C------------A-------G
i Pygathrix_cinerea.k141_374971                         I 2 C 0
s Pygathrix_nigripes_b.ctg79                                 6807021  5 +   6970761 T----------------------T--C------------A-------G
i Pygathrix_nigripes_b.ctg79                               I 2 C 0
s Pygathrix_nigripes_a.k141_101123                             6412  5 +     18040 T----------------------T--C------------A-------G
i Pygathrix_nigripes_a.k141_101123                        I 2 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                16331  7 +     68503 T----------------------C--T------------A-----AAG
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 1 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1788395  7 +   2252614 t----------------------t--t------------aaa-----g
i Rhinolophus_sinicus.LVEH01000179.1                    I 37 C 0
s Rhinopithecus_bieti.k119_554384                             822  5 -     17045 T----------------------T--C------------A-------G
i Rhinopithecus_bieti.k119_554384                       I 2 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206378299  5 - 206558726 T----------------------t--c------------a-------g
i Rhinopithecus_roxellana.NC_044549.1                   I 2 C 0
s Rhinopithecus_strykeri.ctg4                            44857213  5 -  45163003 T----------------------T--C------------A-------G
i Rhinopithecus_strykeri.ctg4                           I 2 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                19859 11 +    109198 T----------------------A--A------------A-AAAAATG
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            I 1 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       8488  7 +     12214 T----------------------C--T------------A-----AAG
i Saiga_tatarica.SaiTat_scaffold_82192                  I 5 C 0
s Saimiri_boliviensis.NW_024100938.1                     15673371  5 -  43202129 T----------------------T--A------------A-------G
i Saimiri_boliviensis.NW_024100938.1                    I 2 C 0
s Saimiri_cassiquiarensis.k141_808270                        5284  5 +     34089 T----------------------T--A------------A-------G
i Saimiri_cassiquiarensis.k141_808270                   I 2 C 0
s Saimiri_macrodon.k141_2087127                              5226  5 -     60842 T----------------------T--A------------A-------G
i Saimiri_macrodon.k141_2087127                         I 2 C 0
s Saimiri_oerstedii.k141_841116                              5319  5 +     67014 T----------------------T--A------------A-------G
i Saimiri_oerstedii.k141_841116                         I 2 C 0
s Saimiri_sciureus.k141_1947592                              5297  5 +     60816 T----------------------T--A------------A-------G
i Saimiri_sciureus.k141_1947592                         I 2 C 0
s Saimiri_ustus.k141_1282476                                 5234  5 -     76454 T----------------------T--A------------A-------G
i Saimiri_ustus.k141_1282476                            I 2 C 0
s Sapajus_apella.ctg10                                   17341961  5 -  30362882 T----------------------T--A------------A-------G
i Sapajus_apella.ctg10                                  I 2 C 0
s Sapajus_macrocephalus.k141_966464                         21322  5 -     62485 T----------------------T--A------------A-------G
i Sapajus_macrocephalus.k141_966464                     I 2 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   32820  7 -    114521 T----------------------T--T------------A-----AAG
i Scalopus_aquaticus.ScaAqu_scaffold_9300               I 2 C 0
s Semnopithecus_entellus.k141_1572367                        4025  5 +     15331 T----------------------T--C------------A-------G
i Semnopithecus_entellus.k141_1572367                   I 2 C 0
s Semnopithecus_hypoleucos.k141_761524                       9418  5 +     20762 T----------------------T--C------------A-------G
i Semnopithecus_hypoleucos.k141_761524                  I 2 C 0
s Semnopithecus_johnii.k141_785014                         119421  5 +    130994 T----------------------T--C------------A-------G
i Semnopithecus_johnii.k141_785014                      I 2 C 0
s Semnopithecus_priam.k141_410937                           38207  5 +     46263 T----------------------T--C------------A-------G
i Semnopithecus_priam.k141_410937                       I 2 C 0
s Semnopithecus_schistaceus.k141_387461                     31327  5 +     42640 T----------------------T--C------------A-------G
i Semnopithecus_schistaceus.k141_387461                 I 2 C 0
s Semnopithecus_vetulus.k141_1143185                        14367  5 +     30600 T----------------------T--C------------A-------G
i Semnopithecus_vetulus.k141_1143185                    I 2 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  100818  5 -    120886 C----------------------T--C------------A-------G
i Sigmodon_hispidus.SigHis_scaffold_11332               I 2 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            19426  7 +    739146 T----------------------T--T------------A-----AAG
i Solenodon_paradoxus.SolPar_flattened_line_1012        I 2 C 0
s Sorex_araneus.JH798170.1                               17767003  1 -  27805282 -----------------------------------------------a
i Sorex_araneus.JH798170.1                              I 5 C 0
s Spermophilus_dauricus.KZ294190.1                        2240316  7 +   2842873 t----------------------t--t------------aaa-----g
i Spermophilus_dauricus.KZ294190.1                      I 3 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             235357  7 -    276980 T----------------------T--T------------T-----AAG
i Spilogale_gracilis.SpiGra_flattened_line_905          I 10 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            28121  7 +     62062 T----------------------T--T------------A-----AAG
i Suricata_suricatta.SurSur_flattened_line_20339        I 1 C 0
s Sus_scrofa.CM000824.4                                 189272641  7 + 218635234 t----------------------t--t------------aaa-----a
i Sus_scrofa.CM000824.4                                 I 1 C 0
s Symphalangus_syndactylus.tarseq_24                        15557  5 -  13920577 T----------------------T--A------------A-------G
i Symphalangus_syndactylus.tarseq_24                    I 2 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                 798 18 +     20549 T----------------------T--T-TTTTAAGATTAG-----AAA
i Tadarida_brasiliensis.TadBra_scaffold_61492           I 2 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               15240  7 +     45698 T----------------------T--T------------A-----TAG
i Tamandua_tetradactyla.TamTet_scaffold_26877           I 1 C 0
s Tapirus_indicus.TapInd_scaffold_176                      807668  7 +   1148477 T----------------------T--T------------T-----AAG
i Tapirus_indicus.TapInd_scaffold_176                   I 2 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  58380  7 +     99546 T----------------------T--T------------T-----AAG
i Tapirus_terrestris.TapTer_scaffold_14939              I 3 C 0
s Tarsius_lariang.k141_609102                               27034  5 +     42269 T----------------------C--A------------G-------G
i Tarsius_lariang.k141_609102                           I 1 C 0
s Tarsius_wallacei.k141_48636                               60350  5 +     65473 T----------------------C--A------------G-------G
i Tarsius_wallacei.k141_48636                           I 1 C 0
s Theropithecus_gelada.CM009951.1                       194008421  5 - 194193292 t----------------------t--c------------a-------g
i Theropithecus_gelada.CM009951.1                       I 2 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             39396  4 -     47444 T----------------------A--A------------A--------
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         I 3 I 2
s Tolypeutes_matacus.TolMat_scaffold_269431                  6047  2 +      6782 --------------------------T------------A--------
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 I 1
s Tonatia_saurophila.TonSau_scaffold_3334                  136615  3 -    259118 T----------------------T--T---------------------
i Tonatia_saurophila.TonSau_scaffold_3334               I 2 I 7
s Trachypithecus_auratus.k141_738098                        27523  5 +     38948 T----------------------T--C------------A-------G
i Trachypithecus_auratus.k141_738098                    I 2 C 0
s Trachypithecus_crepusculus.k141_1588528                   21255  5 -     32910 T----------------------T--C------------A-------G
i Trachypithecus_crepusculus.k141_1588528               I 2 C 0
s Trachypithecus_cristatus.k141_1011511                      2641  5 -     12939 T----------------------T--C------------A-------G
i Trachypithecus_cristatus.k141_1011511                 I 2 C 0
s Trachypithecus_francoisi.k141_768164                       2577  5 -     14244 T----------------------T--C------------A-------G
i Trachypithecus_francoisi.k141_768164                  I 2 C 0
s Trachypithecus_geei.k141_670367                           43976  5 -     54611 T----------------------T--C------------A-------G
i Trachypithecus_geei.k141_670367                       I 2 C 0
s Trachypithecus_germaini.k141_868450                        1779  5 -     11566 T----------------------T--C------------A-------G
i Trachypithecus_germaini.k141_868450                   I 2 C 0
s Trachypithecus_hatinhensis.k141_504423                     3956  5 -     15592 T----------------------T--C------------A-------G
i Trachypithecus_hatinhensis.k141_504423                I 2 C 0
s Trachypithecus_laotum.k141_760702                          2612  5 +     14371 T----------------------T--C------------A-------G
i Trachypithecus_laotum.k141_760702                     I 2 C 0
s Trachypithecus_leucocephalus.k141_381681                    893  5 +     12481 T----------------------T--C------------A-------G
i Trachypithecus_leucocephalus.k141_381681              I 2 C 0
s Trachypithecus_melamera.k141_699241                         769  5 -     24393 T----------------------T--C------------A-------G
i Trachypithecus_melamera.k141_699241                   I 2 C 0
s Trachypithecus_obscurus.k141_1115109                       6015  5 -     28054 T----------------------T--C------------A-------G
i Trachypithecus_obscurus.k141_1115109                  I 2 C 0
s Trachypithecus_phayrei.ctg3                            44660815  5 -  44834318 T----------------------T--C------------A-------G
i Trachypithecus_phayrei.ctg3                           I 2 C 0
s Trachypithecus_pileatus.k141_1022309                       3123  5 +     13828 T----------------------T--C------------A-------G
i Trachypithecus_pileatus.k141_1022309                  I 2 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   5694  5 +     90398 --------------------------T------------A-----AAG
i Tragulus_javanicus.TraJav_scaffold_14717              I 1 C 0
s Trichechus_manatus.JH594618.1                          16085878  8 +  31416278 t----------------------a--a-----------aaaa-----g
i Trichechus_manatus.JH594618.1                         I 3 C 0
s Tupaia_chinensis.KB320831.1                             2793659  7 -   3938065 C----------------------T--C------------T-----AAG
i Tupaia_chinensis.KB320831.1                           I 1 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    5845  7 +     13056 C----------------------T--C------------T-----AAG
i Tupaia_tana.TupTan_flattened_line_68454               I 1 C 0
s Tursiops_truncatus.MRVK01000923.1                      69313963  7 -  96451834 t----------------------t--t------------aaa-----c
i Tursiops_truncatus.MRVK01000923.1                     I 2 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   1858  6 +     10241 -----------------------T--T------------A-----AAA
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6515358  7 +  28682327 t----------------------t--a------------aaa-----g
i Ursus_maritimus.KK498671.1                            I 1 C 0
s Varecia_rubra.k141_432109                                  5923 27 -     20643 TTTTTTTTTTTTTTTTTTTTTAAA--G------------A-------G
i Varecia_rubra.k141_432109                             I 1 C 0
s Varecia_variegata.k141_775891                             25464 21 -     33872 TTTTTTTTTTTTTTT------AAA--G------------A-------G
i Varecia_variegata.k141_775891                         I 1 C 0
s Vicugna_pacos.KN269600.1                                1525211  7 -   2331223 t----------------------t--t------------aaa-----g
i Vicugna_pacos.KN269600.1                              I 1 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                138848  7 -    281493 T----------------------T--A------------A-----AAG
i Vulpes_lagopus.VulLag_flattened_line_2045             I 1 C 0
s Xerus_inauris.XerIna_scaffold_7898                       127431  7 -    134049 T----------------------T--T------------A-----AAG
i Xerus_inauris.XerIna_scaffold_7898                    I 2 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        214828  7 -    227762 T----------------------T--A------------A-----AAG
i Zalophus_californianus.ZalCal_flattened_line_4097     I 1 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     16379  4 -     20485 T----------------------T--T------------A--------
i Zapus_hudsonius.ZapHud_scaffold_64392                 I 2 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           7462  7 -      8775 T----------------------T--T------------A-----AAG
i Ziphius_cavirostris.ZipCav_flattened_line_127025      I 2 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                701732 90 +    802869 I
e Procavia_capensis.ProCapCap_scaffold_149274                2467 1156 -      9567 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Megaderma_lyra.MegLyr_scaffold_3562                       64783 239 -    234502 I
e Heterohyrax_brucei.HetBruBak_scaffold_25354               61360 1157 +     73687 I
e Crocidura_indochinensis.CroInd_scaffold_848148              199  0 +      1327 C
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1008 325 -      5782 I
e Hylobates_klossii.k141_285563                               343 193 +      1026 I
e Microtus_ochrogaster.CM001673.1                        22820341  4 -  98408828 I
e Rattus_norvegicus.chr11                                13915860 1475 +  90463843 I
e Ondatra_zibethicus.OndZib_scaffold_6821                  125594  4 +    145789 I
e Nannospalax_galili.KL201303.1                            119159  6 +    362372 I
e Graphiurus_murinus.GraMur_scaffold_4493                   77863  0 +    118900 C
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I
e Ellobius_talpinus.LOJH01090055.1                           7151  4 -      7838 I
e Ellobius_lutescens.LOEQ01003611.1                        240029  1 -    369425 I
e Acomys_cahirinus.AcoCah_scaffold_1625                    113090  0 -    189883 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               12400 3 +    209709 A----A--T
s Acinonyx_jubatus.LLWD01000356.1                         2034539 3 +   3721120 t----t--t
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10657873 3 +  23371972 a----c--t
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7095225 3 -  16596857 a----t--t
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   17473 3 -     22067 A----T--T
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   1917 3 -     60446 A----A--T
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         2637 3 -     29318 A----A--T
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         1572 3 +     38766 A----A--T
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          2531 3 -     80423 A----A--T
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            10831 3 -     18050 A----A--T
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_1710068                                546 3 +      1555 A----A--T
i Alouatta_caraya.k141_1710068                          C 0 C 0
s Alouatta_discolor.k141_811576                             11504 3 -     21359 A----A--T
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                1125 3 +      2129 A----A--T
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_2177643                           509 3 -      1868 A----A--T
i Alouatta_macconnelli.k141_2177643                     C 0 C 0
s Alouatta_nigerrima.k141_3537692                             558 3 +      1660 A----A--T
i Alouatta_nigerrima.k141_3537692                       C 0 C 0
s Alouatta_palliata.k141_2764429                              473 3 -      1480 A----A--T
i Alouatta_palliata.k141_2764429                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            4551 3 -      4927 A----A--T
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_1531728                             688 3 -      1692 A----A--T
i Alouatta_seniculus.k141_1531728                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3520669 3 +   4113121 A----T--T
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      391076 1 -    631301 --------T
i Anoura_caudifer.AnoCau_scaffold_422                   I 7 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            31251 3 +     33004 A----T--T
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 63183 3 +     78111 C----A--T
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            6125 3 +     22701 C----A--T
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5750082 3 +   9889416 C----A--T
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             6671 3 -    104377 C----A--T
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               6673 3 +     23246 C----A--T
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     4227 3 +      5067 A----T--T
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        1736 3 +      9265 G----T--T
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 9494 1 -     29036 --------T
i Artibeus_jamaicensis.ArtJam_scaffold_41619            I 7 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9539942 3 +  39197703 A----A--T
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             61213 3 +     85812 A----A--T
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                12226 3 +     89302 A----A--T
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             16729 3 -     58268 A----A--T
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             64721 3 +    119057 A----A--T
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               6692 3 -     25888 A----A--T
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 7473 3 -     16375 G----A--T
i Avahi_laniger.k141_2840928                            C 0 I 2
s Avahi_peyrierasi.k141_798820                               1089 3 +      6337 G----A--T
i Avahi_peyrierasi.k141_798820                          C 0 I 2
s Balaenoptera_acutorostrata.KI537095.1                  26380743 3 +  51448160 a----t--t
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        5915 3 -     13118 a----t--t
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   43779 3 -     72089 A----T--G
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6560395 3 +   6870073 A----T--T
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138140510 3 - 161108492 A----T--T
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     573051 3 -    998990 A----T--T
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136296243 3 - 158972876 A----T--T
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1233323 3 -   1914593 A----T--T
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               114579 3 -    171031 A----A--T
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 13608 3 +    125063 A----A--T
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                15651 3 -    216513 A----A--T
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        8194 3 -    134917 A----A--T
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3220114 3 -   8989139 a----t--t
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           397815 3 -  15254737 a----t--t
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2973551 3 +   6889770 a----t--t
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11520017 3 +  39901454 A----T--T
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   15042 3 +     87036 A----T--T
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11266684 3 -  35597290 a----t--t
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11089218 3 +  39895921 a----t--t
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16456233 3 -  44759192 a----t--t
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21325744 3 + 157394656 A----T--T
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135706972 3 - 157403528 A----T--T
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          309587 3 +    345090 A----T--T
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               60277 1 +     67245 --------T
i Carollia_perspicillata.CarPer_scaffold_4436           I 7 C 0
s Castor_canadensis.CasCan_scaffold_47037                   31666 3 +     33760 A----T--T
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   159428 3 -    276539 A----G--T
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15787194 1 -  24422027 --------T
i Cavia_aperea.AVPZ01000278.1                           I 2 C 0
s Cavia_porcellus.DS562889.1                             15799130 1 -  24440124 --------T
i Cavia_porcellus.DS562889.1                            I 2 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       177321 1 +    436027 --------T
i Cavia_tschudii.CavTsc_scaffold_488                    I 2 C 0
s Cebus_albifrons.Contig22                               18891421 3 -  29618158 A----A--T
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 8965 3 -     26817 A----A--T
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                13208 3 +     25043 A----A--T
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         8611 3 +     21754 A----T--T
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4364437 3 +   7569818 a----t--t
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         4194 3 -      9338 A----T--T
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6555863 3 +   6739814 a----a--t
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      27340 3 +     60454 A----A--T
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          2546 3 -     21101 A----A--T
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         59855 3 -    107033 A----A--T
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        2745 3 -     17608 A----A--T
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          30241 3 +     30494 A----A--T
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          59086 3 -     59240 A----A--T
i Cercopithecus_diana.k141_2980617                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          2787 3 +     16677 A----A--T
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           24946 3 +     35983 A----A--T
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11991472 3 +  12117833 A----A--T
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46478232 3 +  46592721 A----A--T
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      41782 3 -     45581 A----A--T
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       2788 3 +     35577 A----A--T
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        2563 3 -     25661 A----A--T
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        2541 3 -     17744 A----A--T
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        22158 3 +     37128 A----A--T
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           3316 1 -      6963 --------C
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           59747 3 -     68416 G----A--T
i Cheirogaleus_major.k141_1157592                       C 0 I 3
s Cheirogaleus_medius.k141_133808                            8795 3 +     13308 G----A--T
i Cheirogaleus_medius.k141_133808                       C 0 I 3
s Cheracebus_lucifer.k141_619653                             6236 3 -     18223 A----A--T
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             23254 3 +     25473 A----A--T
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           42294 3 +     57117 A----A--T
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          46973 3 +     54541 A----A--T
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15962283 1 +  43084221 --------t
i Chinchilla_lanigera.JH721867.1                        I 2 C 0
s Chiropotes_israelita.k141_1189915                         71780 3 +    196370 A----A--T
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          15960 3 +     40510 A----A--T
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15140151 3 -  15256731 G----A--T
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      34766 3 -     53260 A----A--T
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101145319 3 + 101219884 a----a--t
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                17013 3 -     21363 A----G--T
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           762318 3 +    964067 a----g--t
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10887083 3 +  10971483 a----a--t
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147665248 3 + 156195979 A----A--T
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            17233 3 +     23629 A----A--T
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60614145 3 +  78930452 a----t--t
i Condylura_cristata.JH655880.1                         C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 279088 3 -    399297 A----T--T
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53029763 3 +  72327488 A----T--T
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            52575 3 -     70449 A----T--T
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  208980 5 -    956709 A----TTGT
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 31628 1 -     67205 --------T
i Ctenomys_sociabilis.CteSoc_scaffold_19489             I 2 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                18324 1 +     26546 --------T
i Cuniculus_paca.CunPac_flattened_line_16637            I 2 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             59416 1 -    236241 --------T
i Dasyprocta_punctata.DasPun_flattened_line_634         I 2 C 0
s Dasypus_novemcinctus.JH568778.1                          184188 3 -   6883506 t----t--t
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16845618 3 +  31942871 G----T--T
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80037367 3 -  96802777 a----t--t
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18699556 1 -  18957592 --------t
i Desmodus_rotundus.KZ672188.1                          I 7 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 323089 3 +    993696 a----t--t
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   3741 3 +    151128 A----T--T
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   157551 1 +    228994 --------T
i Dinomys_branickii.DinBra_scaffold_1996                I 2 C 0
s Dipodomys_ordii.KN672545.1                              3656916 3 +   4240102 A----C--T
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 28559 3 +     28912 A----C--T
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                36640 1 -     73477 --------T
i Dolichotis_patagonum.DolPat_scaffold_14102            I 2 C 0
s Echinops_telfairi.JH980316.1                           22999480 3 -  44670279 a----a--g
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 12805 3 +     24177 a----t--t
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1492009 3 +   1727528 A----T--T
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Enhydra_lutris.KZ291749.1                              85872749 3 +  99434291 a----t--t
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4705127 3 +   6522550 a----t--a
i Eptesicus_fuscus.JH977687.1                           I 7 I 86
s Equus_asinus.JREZ01000062.1                             5853534 2 -   7175178 a----t---
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13352039 2 +  41866177 a----t---
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          13528 2 +     92910 a----t---
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11534816 2 +  16010500 -----T--T
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48776201 3 -  48907691 A----A--T
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          315583 3 +    330699 A----T--T
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             62036 3 +     89355 A----T--T
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              5794 3 +     13586 G----A--T
i Eulemur_albifrons.k141_715837                         C 0 I 2
s Eulemur_collaris.k141_311830                               5726 3 -      6809 G----A--T
i Eulemur_collaris.k141_311830                          C 0 I 2
s Eulemur_coronatus.k141_3240342                            12200 3 +     36558 G----A--T
i Eulemur_coronatus.k141_3240342                        C 0 I 2
s Eulemur_flavifrons.k141_903901                             8521 3 +     60246 G----A--T
i Eulemur_flavifrons.k141_903901                        C 0 I 2
s Eulemur_fulvus.k141_653297                                11999 3 +    109717 G----A--T
i Eulemur_fulvus.k141_653297                            C 0 I 2
s Eulemur_macaco.k141_1341545                               16383 3 +     16540 G----A--T
i Eulemur_macaco.k141_1341545                           C 0 I 2
s Eulemur_mongoz.k141_825972                                16659 3 +     27497 G----A--T
i Eulemur_mongoz.k141_825972                            C 0 I 2
s Eulemur_rubriventer.k141_411740                           19115 3 +     26808 G----A--T
i Eulemur_rubriventer.k141_411740                       C 0 I 2
s Eulemur_rufus.k141_1620292                                33853 3 +     46535 G----A--T
i Eulemur_rufus.k141_1620292                            C 0 I 2
s Eulemur_sanfordi.k141_186399                              16579 3 -     29447 G----A--T
i Eulemur_sanfordi.k141_186399                          C 0 I 2
s Felis_catus.CM001386.2                                129893494 3 - 159252932 t----t--t
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129280586 3 - 158578461 t----t--t
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 21726 3 +     52776 T----T--T
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Galago_moholi.ctg555                                     211643 3 -    847004 G----T--T
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           14017 3 -     43889 G----T--T
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          11083 3 +     27357 G----T--T
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               156854 3 +    324696 A----T--T
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    181814 3 -    189561 A----T--T
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           14311 3 -     18683 A----T--T
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               5920 3 -     14630 A----A--T
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119653020 3 - 195582420 a----a--t
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         2580 3 +     10286 G----A--T
i Hapalemur_alaotrensis.k141_1280836                    C 0 I 2
s Hapalemur_gilberti.k141_279011                             1060 3 -     11661 G----A--T
i Hapalemur_gilberti.k141_279011                        C 0 I 2
s Hapalemur_griseus.k141_1387522                             6386 3 +     56096 G----A--T
i Hapalemur_griseus.k141_1387522                        C 0 I 2
s Hapalemur_meridionalis.k141_186231                        29635 3 -     42470 G----A--T
i Hapalemur_meridionalis.k141_186231                    C 0 I 2
s Hapalemur_occidentalis.k141_797938                        46263 3 -     54384 G----A--T
i Hapalemur_occidentalis.k141_797938                    C 0 I 2
s Helogale_parvula.HelPar_flattened_line_22962              17773 3 +     53719 A----T--T
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                28029 3 -     91191 A----T--T
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2551647 1 +  31725842 --------t
i Heterocephalus_glaber.JH602058.1                      I 2 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              147672 3 +    277961 A----T--T
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      278950 3 -    477199 a----t--t
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              8100 3 -      9143 A----T--T
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      5607 3 -   7690867 A----A--T
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 17850 3 -     67322 A----T--T
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19549 1 -    119109 --------T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       I 2 C 0
s Hylobates_abbotti.k141_493872                              5755 3 +      5897 A----A--T
i Hylobates_abbotti.k141_493872                         C 0 C 0
s Hylobates_agilis.k141_1878600                               648 3 -      1230 A----A--T
i Hylobates_agilis.k141_1878600                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14625301 3 -  25970782 A----A--T
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            2557 3 -      2977 A----A--T
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             34460 3 -     60944 A----A--T
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7126407 3 +  13083262 a----c--T
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_5141390                                   1106 3 -      3181 G----A--T
i Indri_indri.k141_5141390                              C 0 I 2
s Inia_geoffrensis.IniGeo_flattened_line_66725               9572 3 +     17520 A----T--T
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8566487 3 +  11848649 A----T--T
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               24179 3 +     37189 A----T--A
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          50811 3 -    147782 A----A--T
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                     877 3 +     26176 a----t--t
i Lasiurus_borealis.LasBor_scaffold_59542               I 7 C 0
s Lemur_catta.scaffold_1                                258407942 3 - 285822530 G----A--T
i Lemur_catta.scaffold_1                                C 0 I 2
s Lepilemur_ankaranensis.k141_884009                        24692 3 +     39228 A----A--T
i Lepilemur_ankaranensis.k141_884009                    C 0 I 2
s Lepilemur_dorsalis.k141_134267                            54078 3 +     63517 A----A--T
i Lepilemur_dorsalis.k141_134267                        C 0 I 2
s Lepilemur_ruficaudatus.k141_617879                        79340 3 +    116806 A----A--T
i Lepilemur_ruficaudatus.k141_617879                    C 0 I 2
s Lepilemur_septentrionalis.k141_578524                     32331 3 -     33031 A----A--T
i Lepilemur_septentrionalis.k141_578524                 C 0 I 2
s Leptonychotes_weddellii.KB714749.1                      3086535 3 -   3498232 a----t--t
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    13827 3 +     22452 A----T--T
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            136529 3 +   3060487 a----t--t
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19248957 3 +  19376315 A----A--T
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           11386 3 +     84689 G----T--T
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3779135 3 +   6799190 G----T--T
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20595364 3 -  62548349 a----a--t
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11088674 3 +  39895028 a----t--t
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             20692 3 +     74745 A----A--T
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12707149 3 +  12821369 A----A--T
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                2791 3 -      3136 A----A--T
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           47606 3 +     63263 A----A--T
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                 2314 3 -      2568 A----A--T
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 2899 3 -      7381 A----A--T
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  46116 3 -     79256 A----A--T
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196036223 3 + 196197964 a----a--t
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11446393 3 +  11645122 a----a--t
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   5063 3 -     46448 A----A--T
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                2737 3 -     13212 A----A--T
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 16416 3 -     55006 A----A--T
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43841532 3 +  43892939 A----A--T
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               17702 3 -     24607 A----A--T
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               5068 3 -     27140 A----A--T
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43438117 3 -  43563597 A----A--T
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4450937 3 -   4543643 A----A--T
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            146620 3 +    252755 a----t--t
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             36763 3 +     58827 a----t--t
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36874226 3 +  64221397 A----C--T
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             1561 3 -     87323 A----T--T
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               13485 3 +     15977 A----T--T
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1047449 3 -  26018355 A----T--T
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_227248                    856 3 -      1377 A----T--T
i Mesoplodon_bidens.MesBid_scaffold_227248              C 0 C 0
s Microcebus_murinus.CM007691.1                          16510964 3 +  47401472 g----a--t
i Microcebus_murinus.CM007691.1                         C 0 I 2
s Microgale_talazaci.MicTal_scaffold_34660                  35475 3 -     48017 A----A--T
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               23468 1 -     32043 --------T
i Micronycteris_hirsuta.MicHir_scaffold_37978           I 7 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8210635 3 +  10048721 a----t--t
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            35124 3 +     45743 A----T--T
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         2666 3 +     29742 A----A--T
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        12051 3 -    104932 A----T--T
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     6353 3 +      8497 G----A--T
i Mirza_zaza.k141_226143                                C 0 I 2
s Monodon_monoceros.MonMon_M_scaffold_5598                 146957 3 +    154973 A----T--T
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                161990 3 +    265003 G----T--T
i Mormoops_blainvillei.MorMeg_scaffold_2952             I 9 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  2044 3 -     19904 A----T--T
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  145468 3 -    168139 A----T--T
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          20086 3 -    100666 A----T--T
i Murina_feae.MurFea_scaffold_2254                      I 7 C 0
s Mus_caroli.LT608236.1                                  70767096 3 +  92629107 a----t--t
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75490156 3 +  98207768 A----T--T
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67556384 3 +  89017189 a----t--t
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74331331 3 +  97876770 a----t--t
i Mus_spretus.CM004110.1                                C 0 C 0
s Mustela_putorius.JH417978.1                             4424929 3 -  28371801 a----t--t
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     90667 1 -    117718 --------T
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 2 C 0
s Myotis_brandtii.KE161952.1                               968618 3 +   8389877 a----t--t
i Myotis_brandtii.KE161952.1                            I 7 C 0
s Myotis_davidii.KB114863.1                               5020293 3 +   6462685 a----t--t
i Myotis_davidii.KB114863.1                             I 7 C 0
s Myotis_lucifugus.GL429887.1                             3466202 3 -   3747815 A----T--T
i Myotis_lucifugus.GL429887.1                           I 7 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        11412 3 +     66751 A----T--T
i Myotis_myotis.MyoMyo_scaffold_6123                    I 7 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             5581 3 -      8794 A----G--T
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nasalis_larvatus.k141_153429                               9173 3 +     48152 A----A--T
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4485441 3 -  14209539 a----t--t
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3951569 3 -   4490290 a----t--t
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Nomascus_annamensis.k141_720788                             555 3 -      1065 A----A--T
i Nomascus_annamensis.k141_720788                       C 0 C 0
s Nomascus_concolor.k141_581629                               118 3 -      6578 A----A--T
i Nomascus_concolor.k141_581629                         C 0 C 0
s Nomascus_gabriellae.k141_1004198                            426 3 +      1448 A----A--T
i Nomascus_gabriellae.k141_1004198                      C 0 C 0
s Nomascus_siki_b.tarseq_80                             25577 3 -  18771707 A----A--T
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  3280 3 +      4512 A----A--T
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                31475 3 +   3668941 a----t--t
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65567840 3 -  95554990 G----T--T
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            4566 3 +      6470 G----T--T
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65670175 3 +  89412551 G----T--T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4996577 3 -  23139505 A----T--T
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3686450 1 +  10294119 --------t
i Octodon_degus.JH651621.1                              I 2 C 0
s Odobenus_rosmarus.KB229369.1                             680108 3 -   3126709 a----t--t
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1080224 3 +   1425656 A----T--T
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         37542 3 +     78940 A----T--T
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  37640 3 +     62360 A----T--T
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7225254 3 -   7562323 a----t--t
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              60496 3 -     66828 A----A--T
i Orycteropus_afer.OryAfe_flattened_line_13509          I 1901 C 0
s Oryctolagus_cuniculus.CM000803.1                      141876864 3 + 163896628 a----t--t
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      308759 3 -    505867 a----t--t
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        1458 3 -     53940 G----T--T
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18009439 3 -  38779656 g----t--t
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134077820 3 - 275406953 A----T--T
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      79035 3 +    140051 A----T--T
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.AJFE02002857.1                                 971 3 -      1091 a----a--t
i Pan_paniscus.AJFE02002857.1                           I 10 I 17
s Pan_troglodytes.KZ622857.1                               328138 3 +    772158 a----a--t
i Pan_troglodytes.KZ622857.1                            I 10 I 17
s Panthera_onca.PanOnc_flattened_line_1615                  34864 3 +    295523 T----T--T
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3638598 3 +  18214204 t----t--t
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5028273 3 -   6340057 t----t--t
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1066670 3 -   1292953 A----T--T
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188156904 3 - 188283584 a----a--t
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             5221 3 +      5367 A----A--T
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47514289 3 +  47705337 A----A--T
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 68265 3 -    104429 A----A--T
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    6801 3 +     14967 A----A--T
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 2660 3 -      7628 A----A--T
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    116355 3 -    135482 A----T--T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           6143 3 -     23713 G----T--T
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            25457 3 -     27972 G----T--T
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359        597 3 +     49596 A----T--T
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4950887 3 -   8017169 A----T--T
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    14177 1 -     36578 --------T
i Petromus_typicus.PetTyp_scaffold_33007                I 2 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            121858 3 -    122454 A----T--T
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1987485                           2687 3 -      5908 A----A--C
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       3311 3 -     17985 A----A--C
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            2678 3 +      7694 A----A--C
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26741156 3 +  26888534 a----a--c
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            98469 3 +    112873 A----T--T
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        I 7 C 0
s Pithecia_albicans.k141_991845                             44417 3 -     61926 A----A--T
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        25802 3 +     78826 A----A--T
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              9849 3 -     15800 A----A--T
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        13048 3 -     16101 A----A--T
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          6276 3 +      9673 A----A--T
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13475276 3 -  19735023 A----A--T
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           14179 3 -     31692 A----A--T
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           5945 3 +     21690 A----T--T
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       23519 3 +     44506 A----A--T
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        23731 3 +     67491 A----A--T
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      13971 3 -     98129 A----A--T
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     23571 3 +    147771 A----A--T
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                          207 3 -     43940 A----A--T
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          4290 3 -     55515 A----A--T
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         23644 3 +    152463 A----A--T
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       1361 3 -    119457 A----A--T
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         13367 3 +    134592 A----A--T
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          23954 3 -     75465 A----A--T
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              187806 3 -    373494 a----a--t
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19808454 3 +  19899266 A----A--T
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               6417 3 -     15069 A----A--T
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              6547 3 +     14865 A----A--T
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6849309 3 +  12164890 g----a--t
i Prolemur_simus.MPIZ01000048.1                         C 0 I 2
s Propithecus_coquerelli.NW_012147863.1                     19476 3 -     30946 n----n--n
i Propithecus_coquerelli.NW_012147863.1                 C 0 I 2
s Propithecus_coronatus.k141_1353159                         4386 3 +     11805 G----A--T
i Propithecus_coronatus.k141_1353159                    C 0 I 2
s Propithecus_diadema.k141_577245                           43729 3 +     52369 G----A--T
i Propithecus_diadema.k141_577245                       C 0 I 2
s Propithecus_edwardsi.k141_1317105                         36116 3 -     44753 G----A--T
i Propithecus_edwardsi.k141_1317105                     C 0 I 2
s Propithecus_perrieri.k141_7554                            18039 3 +     27322 G----A--T
i Propithecus_perrieri.k141_7554                        C 0 I 2
s Propithecus_tattersalli.k141_907138                       17673 3 -     53241 G----A--T
i Propithecus_tattersalli.k141_907138                   C 0 I 2
s Propithecus_verreauxi.k141_158021                         39937 3 -     48185 G----A--T
i Propithecus_verreauxi.k141_158021                     C 0 I 2
s Psammomys_obesus.NESX01026517.1                           35768 3 +     77221 a----t--t
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            4629 3 -     27784 t----t--t
i Pteronotus_parnellii.KE867983.1                       I 8 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        247240 3 -    344369 A----T--T
i Pteronura_brasiliensis.PteBra_flattened_line_1343     I 3 C 0
s Pteropus_alecto.KB031157.1                             13246539 3 -  17261082 a----t--t
i Pteropus_alecto.KB031157.1                            I 5 C 0
s Pteropus_vampyrus.KN525959.1                             604490 3 -   3946241 a----a--t
i Pteropus_vampyrus.KN525959.1                          I 5 C 0
s Puma_concolor.QAVW01000427.1                          131534878 3 - 161321710 t----t--t
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             30538 3 +     56732 A----A--T
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6807026 3 +   6970761 A----A--T
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             6417 3 +     18040 A----A--T
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                16338 3 +     68503 A----T--T
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1788402 3 +   2252614 a----t--t
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                             827 3 -     17045 A----A--T
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206378304 3 - 206558726 a----a--t
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44857218 3 -  45163003 A----A--T
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                19870 3 +    109198 A----T--T
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       8495 3 +     12214 A----T--T
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15673376 3 -  43202129 A----A--T
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        5289 3 +     34089 A----A--T
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              5231 3 -     60842 A----A--T
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              5324 3 +     67014 A----A--T
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              5302 3 +     60816 A----A--T
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 5239 3 -     76454 A----A--T
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17341966 3 -  30362882 A----A--T
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         21327 3 -     62485 A----A--T
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   32827 3 -    114521 A----T--T
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        4030 3 +     15331 A----A--T
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       9423 3 +     20762 A----A--T
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         119426 3 +    130994 A----A--T
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           38212 3 +     46263 A----A--T
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     31332 3 +     42640 A----A--T
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        14372 3 +     30600 A----A--T
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  100823 3 -    120886 A----T--T
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            19433 3 +    739146 A----T--T
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17767004 7 -  27805282 aacaac--t
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2240323 3 +   2842873 a----c--T
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             235364 3 -    276980 A----T--T
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            28128 3 +     62062 A----T--T
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189272648 3 + 218635234 a----g--t
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        15562 3 -  13920577 A----A--T
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                 816 3 +     20549 A----A--A
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               15247 3 +     45698 A----G--T
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      807675 3 +   1148477 A----T--T
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  58387 3 +     99546 A----T--T
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               27039 3 +     42269 A----T--T
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               60355 3 +     65473 A----T--T
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194008426 3 - 194193292 a----a--t
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             39402 1 -     47444 --------C
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         I 2 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  6050 3 +      6782 A----G--T
i Tolypeutes_matacus.TolMat_scaffold_269431             I 1 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  136625 1 -    259118 --------T
i Tonatia_saurophila.TonSau_scaffold_3334               I 7 C 0
s Trachypithecus_auratus.k141_738098                        27528 3 +     38948 A----A--T
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   21260 3 -     32910 A----A--T
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      2646 3 -     12939 A----A--T
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       2582 3 -     14244 A----A--T
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           43981 3 -     54611 A----A--T
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        1784 3 -     11566 A----A--T
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     3961 3 -     15592 A----A--T
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          2617 3 +     14371 A----A--T
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                    898 3 +     12481 A----A--T
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                         774 3 -     24393 A----A--T
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       6020 3 -     28054 A----A--T
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44660820 3 -  44834318 A----A--T
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       3128 3 +     13828 A----A--T
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   5699 3 +     90398 A----T--T
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16085886 3 +  31416278 a----a--t
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2793666 3 -   3938065 G----t--t
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    5852 3 +     13056 G----T--T
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69313970 3 -  96451834 a----t--t
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   1864 3 +     10241 A----A--A
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6515365 3 +  28682327 a----c--t
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  5950 3 -     20643 G----A--T
i Varecia_rubra.k141_432109                             C 0 I 2
s Varecia_variegata.k141_775891                             25485 3 -     33872 G----A--T
i Varecia_variegata.k141_775891                         C 0 I 2
s Vicugna_pacos.KN269600.1                                1525218 3 -   2331223 a----t--t
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                138855 3 -    281493 A----T--T
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       127438 3 -    134049 A----C--T
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        214835 3 -    227762 A----T--T
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     16383 3 -     20485 A----A--T
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           7469 3 -      8775 A----T--T
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                701732 90 +    802869 I
e Procavia_capensis.ProCapCap_scaffold_149274                2467 1156 -      9567 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Megaderma_lyra.MegLyr_scaffold_3562                       64783 239 -    234502 I
e Heterohyrax_brucei.HetBruBak_scaffold_25354               61360 1157 +     73687 I
e Elephantulus_edwardii.JH947210.1                        7816992 12417 +  15467074 I
e Crocidura_indochinensis.CroInd_scaffold_848148              199 0 +      1327 C
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1008 325 -      5782 I
e Hylobates_klossii.k141_285563                               343 193 +      1026 I
e Microtus_ochrogaster.CM001673.1                        22820341 4 -  98408828 I
e Rattus_norvegicus.chr11                                13915860 1475 +  90463843 I
e Ondatra_zibethicus.OndZib_scaffold_6821                  125594 4 +    145789 I
e Nannospalax_galili.KL201303.1                            119159 6 +    362372 I
e Muscardinus_avellanarius.MusAve_scaffold_9643             12587 233 +     98495 I
e Hystrix_cristata.HysCri_scaffold_50788                     6715 0 +     22540 C
e Graphiurus_murinus.GraMur_scaffold_4493                   77863 0 +    118900 C
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I
e Ellobius_talpinus.LOJH01090055.1                           7151 4 -      7838 I
e Ellobius_lutescens.LOEQ01003611.1                        240029 1 -    369425 I
e Acomys_cahirinus.AcoCah_scaffold_1625                    113090 0 -    189883 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               12403 13 +    209709 AG---A------TT---AT-AT--A------C--AT
s Acinonyx_jubatus.LLWD01000356.1                         2034542 13 +   3721120 ga---a------ct---at-ag--a------t--ag
i Acinonyx_jubatus.LLWD01000356.1                       C 0 I 20
s Acomys_cahirinus.AcoCah_scaffold_1625                    113090  5 -    189883 ------------ta---t--at--------------
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 I 222
s Ailuropoda_melanoleuca.LNAT01000321.1                  10657876 13 +  23371972 gg---a------cT---GC-AT--A------T--AT
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 I 1
s Ailurus_fulgens.LNAC01000003.1                          7095228 13 -  16596857 gg---a------cT---GC-AT--A------T--AT
i Ailurus_fulgens.LNAC01000003.1                        C 0 I 1
s Allactaga_bullata.AllBul_scaffold_70162                   17476 13 -     22067 GG---A------TT---AC-AT--G------T--AT
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   1920 13 -     60446 AG---A------TT---AT-AT--A------C--AT
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         2640 13 -     29318 AG---A------TT---AT-CT--A------C--AT
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         1575 13 +     38766 AG---A------TT---AT-CT--A------C--AT
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          2534 13 -     80423 AG---A------TT---AT-CT--A------C--AT
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            10834 13 -     18050 AG---A------TT---AC-AT--A------C--AG
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_1710068                                549 15 +      1555 AG---A------TT---AT-AT--A------TATAT
i Alouatta_caraya.k141_1710068                          C 0 C 0
s Alouatta_discolor.k141_811576                             11507 13 -     21359 AG---A------TT---AC-AT--A------C--AG
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                1128 15 +      2129 AG---A------TT---AT-AT--A----TAT--AT
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_2177643                           512 15 -      1868 AG---A------TT---AT-AT--A----TAT--AT
i Alouatta_macconnelli.k141_2177643                     C 0 C 0
s Alouatta_nigerrima.k141_3537692                             561 15 +      1660 AG---A------TT---AT-AT--A----TAT--AT
i Alouatta_nigerrima.k141_3537692                       C 0 C 0
s Alouatta_palliata.k141_2764429                              476 13 -      1480 AG---A------TT---AC-AT--A------C--AG
i Alouatta_palliata.k141_2764429                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            4554 15 -      4927 AG---A------TT---AT-ATATA------T--AT
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_1531728                             691 13 -      1692 AG---A------TT---AC-AT--A------T--AG
i Alouatta_seniculus.k141_1531728                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3520672 13 +   4113121 AG---A------CT---AC-AT--A------T--AT
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      391077 11 -    631301 AG---A------CT---A---T--A------T--AT
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            31254 13 +     33004 AG---A------CT---AT-AT--A------T--AT
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 63186 13 +     78111 AG---A------TC---AC-AT--G------T--AT
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            6128 13 +     22701 AG---A------TC---AC-AT--G------T--AT
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5750085 13 +   9889416 AG---A------TC---AC-CT--G------T--AT
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             6674 13 -    104377 AG---A------TC---AC-CT--G------T--AT
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               6676 13 +     23246 AG---A------TC---AC-CT--G------T--AT
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     4230 13 +      5067 GG---T------TT---AC-AT--A------T--AC
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        1739 13 +      9265 AA---A------TT---AG-AC--T------T--AT
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 9495  8 -     29036 AG---A------CT---A---T--A-----------
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 I 1
s Ateles_geoffroyi_b.tarseq_2582                             9539945 13 +  39197703 AG---A------TT---AC-AT--A------C--AT
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             61216 13 +     85812 AG---A------TT---AC-AT--A------C--AT
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                12229 13 +     89302 AG---A------TT---AC-AT--A------C--AT
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             16732 13 -     58268 AG---A------TT---AC-AT--A------C--AT
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             64724 13 +    119057 AG---A------TT---AC-AT--A------C--AT
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               6695 13 -     25888 AG---A------TT---AC-AT--A------C--AT
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 7478 10 -     16375 ------------TT---AT-GC--T------T--AT
i Avahi_laniger.k141_2840928                            I 2 C 0
s Avahi_peyrierasi.k141_798820                               1094 10 +      6337 ------------TT---AT-GC--T------T--AT
i Avahi_peyrierasi.k141_798820                          I 2 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26380746 13 +  51448160 ag---a------cT---AC-GT--A------T--AT
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        5918 13 -     13118 ag---a------cT---AC-GT--A------T--AT
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   43782 13 -     72089 AG---A------TT---AC-AT--A------T--AT
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6560398 13 +   6870073 AG---A------CT---GC-AT--A------T--GT
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138140513 13 - 161108492 AG---A------CT---GC-AT--A------T--GT
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     573054 13 -    998990 AG---A------CT---GC-AT--A------T--GT
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136296246 13 - 158972876 AG---A------CT---GC-AT--A------T--GT
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1233326 13 -   1914593 AG---A------CT---GC-AT--A------T--AT
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               114582 13 -    171031 AG---A------TC---AC-AT--A------T--AT
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 13611 13 +    125063 AG---A------TC---AC-AT--A------T--AT
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                15654 13 -    216513 AG---A------TC---AC-AT--A------T--AT
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        8197 13 -    134917 AG---A------TC---AC-AT--A------T--AT
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3220117 13 -   8989139 ag---a------ct---ac-at--g------t--at
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           397818 13 -  15254737 ag---a------ct---ac-at--g------t--at
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2973554 13 +   6889770 ag---a------ct---ac-at--g------t--at
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11520020 13 +  39901454 GG---A------CA---AC-AT--A------C--AT
i CanFam4.chr31                                         C 0 I 1
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   15045 13 +     87036 GG---A------CA---AC-AT--A------C--AT
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 I 1
s Canis_lupus_dingo.QKWQ01001993.1                       11266687 13 -  35597290 gg---a------cA---AC-AT--A------C--AT
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 I 1
s Canis_lupus_familiaris.chr31                           11089221 13 +  39895921 gg---a------cA---AC-AT--A------C--AT
i Canis_lupus_familiaris.chr31                          C 0 I 1
s Canis_lupus_orion.HG994411.1                           16456236 13 -  44759192 gg---a------cA---AC-AT--A------C--AT
i Canis_lupus_orion.HG994411.1                          C 0 I 1
s Capra_aegagrus.CM003214.1                              21325747 13 + 157394656 AG---A------CT---AC-AT--A------T--AT
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135706975 13 - 157403528 AG---A------CT---AC-AT--A------T--AT
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          309590 13 +    345090 AG---A------TT---GC-AT--A------T--GC
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               60278 13 +     67245 AG---A------CT---A---T--A----TAT--AT
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   31669 13 +     33760 GG---A------TC---AC-AT--A------C--AT
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   159431 13 -    276539 AG---A------TT---AC-AT--G------T--AT
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15787195 13 -  24422027 GG---A------TT---AT-AT--A------T--GT
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15799131 13 -  24440124 GG---A------TT---AT-AT--A------T--GT
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       177322 13 +    436027 GG---A------TT---AT-AT--A------T--GT
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18891424 13 -  29618158 AG---A------TC---AC-AT--A------T--AT
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 8968 13 -     26817 AG---A------TC---AC-AT--A------T--AT
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                13211 13 +     25043 AG---A------TC---AC-AT--A------T--AT
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         8614 13 +     21754 AG---A------TT---GC-AT--A------T--GC
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4364440 13 +   7569818 ag---a------cT---AC-AT--A------T--AT
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         4197 13 -      9338 AG---A------CT---AC-AT--A------T--AT
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6555866 13 +   6739814 ag---a------TT---AT-AT--A------C--AT
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      27343 13 +     60454 AG---A------TT---AT-AT--A------C--AT
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          2549 13 -     21101 AG---A------TT---AT-AT--A------C--AT
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         59858 13 -    107033 AG---A------TT---AT-AT--A------C--AT
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        2748 13 -     17608 AG---A------TT---AT-AT--A------G--AT
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          30244 13 +     30494 AG---A------TT---AT-AT--A------C--AT
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2980617                          59089 13 -     59240 AG---A------TT---AT-AT--A------C--AT
i Cercopithecus_diana.k141_2980617                      C 0 N 0
s Cercopithecus_hamlyni.k141_129805                          2790 13 +     16677 AG---A------TT---AT-AT--A------C--AT
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           24949 13 +     35983 AG---A------TT---AT-AT--A------C--AT
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11991475 13 +  12117833 AG---A------TT---AT-AT--A------C--AT
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46478235 13 +  46592721 AG---A------TT---AT-AT--A------C--AT
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      41785 13 -     45581 AG---A------TT---AT-AT--A------C--AT
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       2791 13 +     35577 AG---A------TT---AT-AT--A------C--AT
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        2566 13 -     25661 AG---A------TT---AT-AT--A------C--AT
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        2544 13 -     17744 AG---A------TT---AT-AC--A------C--AT
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        22161 13 +     37128 AG---A------TT---AT-AT--A------C--AT
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           3317 11 -      6963 AG---A------TT---A---T--A------T--GT
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           59753 10 -     68416 ------------TT---AT-AC--T------T--AT
i Cheirogaleus_major.k141_1157592                       I 3 C 0
s Cheirogaleus_medius.k141_133808                            8801 10 +     13308 ------------TT---AT-AC--T------T--AT
i Cheirogaleus_medius.k141_133808                       I 3 C 0
s Cheracebus_lucifer.k141_619653                             6239 13 -     18223 AG---A------TC---AC-AT--A------T--AT
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             23257 13 +     25473 AG---A------TC---AC-AT--A------T--AC
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           42297 13 +     57117 AG---A------TC---AC-AT--A------T--AT
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          46976 13 +     54541 AG---A------TC---AC-AT--A------T--AT
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15962284 13 +  43084221 gg---a------tt---at-gT--A------T--GT
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         71783 13 +    196370 AG---A------TC---AC-AT--G------T--AT
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          15963 13 +     40510 AG---A------TC---AC-AT--G------T--AT
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15140154 13 -  15256731 AG---A------TT---AT-AT--A------C--AT
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      34769 13 -     53260 AG---A------TT---AT-AT--A------C--AT
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101145322 13 + 101219884 ag---a------TT---AT-AT--A------C--AT
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                17016 11 -     21363 AG---A------TT---A---T--A------T--AT
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           762321 11 +    964067 ag---a------tT---A---T--A------T--AT
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10887086 13 +  10971483 at---a------tt---at-at--a------c--at
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147665251 13 + 156195979 AT---A------TT---AT-AT--A------C--AT
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            17236 13 +     23629 AT---A------TT---AT-AT--A------C--AT
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60614148 13 +  78930452 aa---a------ct---AC-AC--A------T--AT
i Condylura_cristata.JH655880.1                         C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 279091 13 -    399297 AT---A------TT---CC-AT--A------T--AT
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53029766  9 +  72327488 AT---G------TT---TC-AT--------------
i Cricetulus_griseus.LT883672.1                         C 0 I 1
s Cryptoprocta_ferox.CryFer_flattened_line_19014            52578 13 -     70449 GA---A------CT---AC-AT--A------T--AT
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 I 1
s Ctenodactylus_gundi.CteGun_scaffold_447                  208985 13 -    956709 GG---A------TT---AC-AT--A------T--AA
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 31629 13 -     67205 GG---A------TT---AT-GT--A------T--TT
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                18325 13 +     26546 GG---A------TT---AT-AT--A------T--GT
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             59417 13 -    236241 GG---A------TT---AT-AT--A------T--GT
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          184191 13 -   6883506 ag---a----tcTT---A---T--A------T--AT
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16845621 13 +  31942871 AG---A------TT---AC-AC--T------T--AT
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80037370 13 -  96802777 ag---a------cT---AC-GT--A------T--AC
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18699557 17 -  18957592 ag---g------ct---a---t--atatatat--at
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 323092 13 +    993696 ag---a------cT---AC-AT--A------T--AT
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   3744 13 +    151128 AG---A------CT---AC-AT--A------T--AT
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   157552 13 +    228994 GG---A------TT---AT-AT--A------T--GT
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3656919 13 +   4240102 ag---a------ta---ac-at--a------t--at
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 28562 13 +     28912 AG---A------TA---AC-AT--A------T--AT
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                36641 13 -     73477 GG---A------TT---AT-AT--A------T--GT
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22999483 16 -  44670279 aGACCC------TT---AC-AG--A------T--AT
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 12808 13 +     24177 ag---a------ct---AC-AT--A------T--AT
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1492012 13 +   1727528 AG---A------CT---AC-AT--A------T--AT
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Enhydra_lutris.KZ291749.1                              85872752 13 +  99434291 gg---a------cT---GC-AT--A------T--AT
i Enhydra_lutris.KZ291749.1                             C 0 I 1
s Eptesicus_fuscus.JH977687.1                             4705216 13 +   6522550 aa---a------tt---ac-tt--t------t--aN
i Eptesicus_fuscus.JH977687.1                           I 86 C 0
s Equus_asinus.JREZ01000062.1                             5853536  9 -   7175178 -------------t---ac-aT--A------T--AT
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13352041  9 +  41866177 -------------t---ac-aT--A------T--AT
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          13530  9 +     92910 -------------t---ac-AT--A------T--AT
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11534818 12 +  16010500 TA---A------TT---AC-AT--A------T--G-
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48776204 13 -  48907691 AG---A------TT---AT-CT--A------C--AT
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          315586 13 +    330699 AG---A------CT---AC-GT--A------T--AT
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             62039 13 +     89355 AG---A------CT---AC-GT--A------T--AT
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              5799 10 +     13586 ------------TT---AC-AC--T------T--AT
i Eulemur_albifrons.k141_715837                         I 2 C 0
s Eulemur_collaris.k141_311830                               5731 10 -      6809 ------------TT---AC-AC--T------T--AT
i Eulemur_collaris.k141_311830                          I 2 C 0
s Eulemur_coronatus.k141_3240342                            12205 10 +     36558 ------------TT---AC-AC--T------T--AT
i Eulemur_coronatus.k141_3240342                        I 2 C 0
s Eulemur_flavifrons.k141_903901                             8526 10 +     60246 ------------GT---AC-AC--T------T--AT
i Eulemur_flavifrons.k141_903901                        I 2 C 0
s Eulemur_fulvus.k141_653297                                12004 10 +    109717 ------------TT---AC-AC--T------T--AT
i Eulemur_fulvus.k141_653297                            I 2 C 0
s Eulemur_macaco.k141_1341545                               16388 10 +     16540 ------------GT---AC-AC--T------T--AT
i Eulemur_macaco.k141_1341545                           I 2 C 0
s Eulemur_mongoz.k141_825972                                16664 10 +     27497 ------------TT---AC-AC--T------T--AT
i Eulemur_mongoz.k141_825972                            I 2 C 0
s Eulemur_rubriventer.k141_411740                           19120 10 +     26808 ------------TT---AC-AC--T------T--AT
i Eulemur_rubriventer.k141_411740                       I 2 C 0
s Eulemur_rufus.k141_1620292                                33858 10 +     46535 ------------TT---AC-AC--T------T--AT
i Eulemur_rufus.k141_1620292                            I 2 C 0
s Eulemur_sanfordi.k141_186399                              16584 10 -     29447 ------------TT---AC-AC--T------T--AT
i Eulemur_sanfordi.k141_186399                          I 2 C 0
s Felis_catus.CM001386.2                                129893497 13 - 159252932 ga---a------ct---at-ag--a------t--ag
i Felis_catus.CM001386.2                                C 0 I 32
s Felis_catus_fca126.CM031420.1                         129280589 13 - 158578461 ga---a------ct---at-ag--a------t--ag
i Felis_catus_fca126.CM031420.1                         C 0 I 24
s Felis_nigripes.FelNig_flattened_line_8080                 21729 13 +     52776 GA---A------CT---AT-AG--A------T--AG
i Felis_nigripes.FelNig_flattened_line_8080             C 0 I 24
s Galago_moholi.ctg555                                     211646 13 -    847004 AA---A------TT---AC-AC--T------T--AC
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           14020 13 -     43889 AA---A------TT---AC-AC--T------T--AC
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          11086 13 +     27357 AA---A------TT---GC-AC--T------T--AC
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               156857 13 +    324696 TG---A------TT---AC-AT--A------T--AC
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    181817 13 -    189561 AG---A------CG---AC-AT--A------T--AT
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           14314 13 -     18683 GG---A------AT---AC-AG--A------T--AT
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               5923 13 -     14630 AG---A------TT---AC-AT--A------C--AT
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119653023 13 - 195582420 ag---a------TT---AC-AT--A------C--AT
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         2585 10 +     10286 ------------TT---AC-AC--T------T--AC
i Hapalemur_alaotrensis.k141_1280836                    I 2 C 0
s Hapalemur_gilberti.k141_279011                             1065 10 -     11661 ------------TT---AC-AC--T------T--AC
i Hapalemur_gilberti.k141_279011                        I 2 C 0
s Hapalemur_griseus.k141_1387522                             6391 10 +     56096 ------------TT---AC-AC--T------T--AC
i Hapalemur_griseus.k141_1387522                        I 2 C 0
s Hapalemur_meridionalis.k141_186231                        29640 10 -     42470 ------------TT---AC-AC--T------T--AC
i Hapalemur_meridionalis.k141_186231                    I 2 C 0
s Hapalemur_occidentalis.k141_797938                        46268 10 -     54384 ------------TT---AC-AC--T------T--AC
i Hapalemur_occidentalis.k141_797938                    I 2 C 0
s Helogale_parvula.HelPar_flattened_line_22962              17776 13 +     53719 GA---A------CT---AC-AT--A------T--AT
i Helogale_parvula.HelPar_flattened_line_22962          C 0 I 1
s Hemitragus_hylocrius.HemHyl_scaffold_16669                28032 13 -     91191 AG---A------CT---AC-AT--A------T--AT
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2551648 13 +  31725842 gg---a------tt---at-at--a------t--at
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              147675 13 +    277961 AG---A------CT---AC-AT--A------T--AT
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      278953 13 -    477199 ag---a------cT---AC-AT--A------G--GT
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              8103 13 -      9143 AG---A------CT---AC-AT--A------G--GT
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      5610 13 -   7690867 AG---A------TT---AC-AT--A------C--AT
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 17853 13 -     67322 GA---A------CT---AC-AT--A------T--AT
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 I 1
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19550 13 -    119109 AG---A------TT---AT-GA--A------T--GT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_493872                              5758 13 +      5897 AG---A------TT---GC-AT--A------C--AT
i Hylobates_abbotti.k141_493872                         C 0 n 0
s Hylobates_agilis.k141_1878600                               651 13 -      1230 AG---A------TT---AC-AT--A------C--AT
i Hylobates_agilis.k141_1878600                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14625304 13 -  25970782 AG---A------TT---AC-AT--A------C--AT
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            2560 13 -      2977 AG---A------TT---AC-AT--A------C--AT
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             34463 13 -     60944 AG---A------TT---AC-AT--A------C--AT
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     6715 12 +     22540 -G---A------TT---AT-AT--A------T--GT
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7126410 13 +  13083262 GG---A------TT---AC-AT--T------T--AT
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_5141390                                   1111 10 -      3181 ------------TT---AT-AC--T------T--AT
i Indri_indri.k141_5141390                              I 2 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               9575 13 +     17520 AG---A------CT---AC-AT--A------T--AC
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8566490 13 +  11848649 GG---A------TT---GC-AT--G------T--AT
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               24182 13 +     37189 AA---A------CT---AC-AT--A------T--AT
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          50814 13 -    147782 AG---A------TT---AC-AT--A------T--AT
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                     880 13 +     26176 ag---a------ct---at-gt--a------t--ac
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258407947 10 - 285822530 ------------TT---AC-AC--T------T--AC
i Lemur_catta.scaffold_1                                I 2 C 0
s Lepilemur_ankaranensis.k141_884009                        24697 10 +     39228 ------------TT---AC-AC--T------T--AT
i Lepilemur_ankaranensis.k141_884009                    I 2 C 0
s Lepilemur_dorsalis.k141_134267                            54083 10 +     63517 ------------TT---AC-AC--T------T--AT
i Lepilemur_dorsalis.k141_134267                        I 2 C 0
s Lepilemur_ruficaudatus.k141_617879                        79345 10 +    116806 ------------TT---AC-AC--T------T--AT
i Lepilemur_ruficaudatus.k141_617879                    I 2 C 0
s Lepilemur_septentrionalis.k141_578524                     32336 10 -     33031 ------------TT---AC-AC--T------T--AT
i Lepilemur_septentrionalis.k141_578524                 I 2 C 0
s Leptonychotes_weddellii.KB714749.1                      3086538 13 -   3498232 gg---a------cT---GC-AT--A------T--AT
i Leptonychotes_weddellii.KB714749.1                    C 0 I 1
s Lepus_americanus.LepAme_scaffold_62849                    13830 13 +     22452 GA---G------TT---CC-AT--A------T--GT
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            136532 13 +   3060487 ag---a------cT---AT-GT--A------T--AC
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19248960 13 +  19376315 AG---A------TT---AT-AT--A------C--AT
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           11389 12 +     84689 AG---A------TT---AC-AC--T------T--A-
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3779138 12 +   6799190 AG---A------TT---AC-AC--T------T--A-
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20595367 13 -  62548349 ag---a------tt---GC-AT--A------T--GT
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11088677 13 +  39895028 gg---a------cA---AC-AT--A------C--AT
i Lycaon_pictus.CM007556.1                              C 0 I 1
s Macaca_arctoides.k141_2201161                             20695 13 +     74745 AG---A------TT---AT-AT--A------C--AT
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12707152 13 +  12821369 AG---A------TT---AT-AT--A------C--AT
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                2794 13 -      3136 AG---A------TT---AT-AT--A------C--AT
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           47609 13 +     63263 AG---A------TT---AT-AT--A------C--AT
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                 2317 13 -      2568 AG---A------TT---AT-AT--A------C--AT
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 2902 13 -      7381 AG---A------TT---AT-AT--A------C--AT
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  46119 13 -     79256 AG---A------TT---AT-AT--A------C--AT
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196036226 13 + 196197964 ag---a------TT---AT-AT--A------C--AT
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11446396 13 +  11645122 ag---a------TT---AT-AT--A------C--AT
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   5066 13 -     46448 AG---A------TT---AT-AT--A------C--AT
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                2740 13 -     13212 AG---A------TT---AT-AT--A------C--AT
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 16419 13 -     55006 AG---A------TT---AT-AT--A------C--AT
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43841535 13 +  43892939 AG---A------TT---AT-AT--A------C--AT
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               17705 13 -     24607 AG---A------TT---AT-AT--A------C--AT
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               5071 13 -     27140 AG---A------TT---AT-AT--A------C--AT
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43438120 13 -  43563597 AG---A------CT---AT-AT--A------C--AT
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4450940 13 -   4543643 AG---A------CT---AT-AT--A------C--AT
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            146623 13 +    252755 aa---a------tt---ac-AT--A------G--AA
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             36766 13 +     58827 aa---a------tt---ac-at--a------t--aa
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36874229 13 +  64221397 GG---A------TT---AC-AT--T------T--AT
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             1564 13 -     87323 GG---A------CT---GC-AT--A------T--AT
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 I 1
s Meriones_unguiculatus.MerUng_scaffold_52233               13488  8 +     15977 AT---A------TT---C--AT--------------
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 I 266
s Mesocricetus_auratus.KB708139.1                         1047452  9 -  26018355 AG---T------TT---TC-AT--------------
i Mesocricetus_auratus.KB708139.1                       C 0 I 1
s Mesoplodon_bidens.MesBid_scaffold_227248                    859 13 -      1377 AG---A------CT---AT-GT--A------T--TC
i Mesoplodon_bidens.MesBid_scaffold_227248              C 0 C 0
s Microcebus_murinus.CM007691.1                          16510969 10 +  47401472 ------------tt---at-ac--t------t--AT
i Microcebus_murinus.CM007691.1                         I 2 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  35478 13 -     48017 AG---T------TT---GC-GG--A------T--AT
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               23469 11 -     32043 AG---A------CT---A---T--A------T--AT
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8210638 13 +  10048721 aa---a------tt---ac-at--a------t--at
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            35127 13 +     45743 AA---A------TT---AC-AT--A------T--AT
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         2669 13 +     29742 AG---A------TT---AT-AT--A------C--AT
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        12054 13 -    104932 GG---A------CT---GC-AT--A------T--AT
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 I 1
s Mirza_zaza.k141_226143                                     6358 10 +      8497 ------------TT---AT-AC--T------T--AT
i Mirza_zaza.k141_226143                                I 2 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 146960 13 +    154973 AG---A------CT---AC-GT--A------T--AC
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                161993 11 +    265003 AA---A------CA---A---T--A------T--AT
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  2047 13 -     19904 AG---A------CT---AC-AT--A------T--AT
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  145471 13 -    168139 GA---A------CT---AC-AT--A------T--AT
i Mungos_mungo.MunMun_flattened_line_8729               C 0 I 1
s Murina_feae.MurFea_scaffold_2254                          20089  6 -    100666 AG---A------CC---A------------------
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70767099  9 +  92629107 at---a------ct---c-cat--------------
i Mus_caroli.LT608236.1                                 C 0 I 188
s Mus_musculus.chr16                                     75490159  9 +  98207768 AT---A------CT---C-CAt--------------
i Mus_musculus.chr16                                    C 0 I 204
s Mus_pahari.LT608305.1                                  67556387  9 +  89017189 at---a------ct---t-cat--------------
i Mus_pahari.LT608305.1                                 C 0 I 179
s Mus_spretus.CM004110.1                                 74331334  9 +  97876770 at---A------CT---C-CAT--------------
i Mus_spretus.CM004110.1                                C 0 I 1764
s Muscardinus_avellanarius.MusAve_scaffold_9643             12820 12 +     98495 ------------T-TTCAA-TG--A------C--AT
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 233 C 0
s Mustela_putorius.JH417978.1                             4424932 13 -  28371801 gg---a------cT---GC-AT--A------T--GT
i Mustela_putorius.JH417978.1                           C 0 I 1
s Myocastor_coypus.MyoCoy_scaffold_3653                     90668 13 -    117718 GG---A------TT---AT-AT--A------T--CT
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               968621  6 +   8389877 ag---a------cc---a------------------
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5020296  6 +   6462685 ag---a------cc---a------------------
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3466205  6 -   3747815 AG---a------cc---a------------------
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        11415  6 +     66751 AG---A------CC---A------------------
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             5584  7 -      8794 AG---A------TT---T---C--------------
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nasalis_larvatus.k141_153429                               9176 13 +     48152 AT---A------TT---AT-AT--A------C--AT
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4485444 13 -  14209539 gg---a------cT---GC-AT--A------T--AT
i Neomonachus_schauinslandi.NINY01007774.1              C 0 I 1
s Neophocaena_asiaeorientalis.KZ688543.1                  3951572 13 -   4490290 ag---a------cT---AC-GT--A------T--AC
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Nomascus_annamensis.k141_720788                             558 13 -      1065 AG---A------TT---AC-AT--A------C--AT
i Nomascus_annamensis.k141_720788                       C 0 C 0
s Nomascus_concolor.k141_581629                               121 13 -      6578 AG---A------TT---AC-AT--A------C--AT
i Nomascus_concolor.k141_581629                         C 0 C 0
s Nomascus_gabriellae.k141_1004198                            429 13 +      1448 AG---A------TT---AC-AT--A------C--AT
i Nomascus_gabriellae.k141_1004198                      C 0 C 0
s Nomascus_siki_b.tarseq_80                             25580 13 -  18771707 AG---A------TT---AC-AT--A------C--AT
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  3283 13 +      4512 AG---A------TT---AC-AT--A------C--AT
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                31478 13 +   3668941 gg---a------cA---AC-AT--A------C--AT
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 I 1
s Nycticebus_bengalensis.LG16                            65567843 12 -  95554990 AG---A------TT---AC-AC--T------T--A-
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            4569 12 +      6470 AG---A------TT---AC-AC--T------T--A-
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65670178 12 +  89412551 AG---A------TT---AC-AC--T------T--A-
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4996580 13 -  23139505 TA---A------Tc---ac-at--a------t--tt
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3686451 13 +  10294119 gg---a------tt---at-at--a------t--tt
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             680111 13 -   3126709 gg---a------cG---GC-AT--A------T--AT
i Odobenus_rosmarus.KB229369.1                          C 0 I 1
s Odocoileus_virginianus.KZ101650.1                       1080227 13 +   1425656 AG---A------CT---AC-AT--A------T--AT
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         37545 13 +     78940 AG---A------CT---AC-AT--A------T--AT
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  37643  9 +     62360 AT---A------TT---CC-AT--------------
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 I 1
s Orcinus_orca.KB316965.1                                 7225257 13 -   7562323 ag---a------cT---AC-GT--A------T--AC
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              60499 13 -     66828 AG---G------TT---GC-AT--A------T--AT
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141876867 13 + 163896628 ga---G------TT---AC-AT--A------T--GT
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      308762 13 -    505867 gg---a------cA---AC-AT--A------C--AT
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 I 1
s Otolemur_crassicaudatus.k141_505435                        1461 13 -     53940 AA---A------TT---AC-AC--T------T--AC
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18009442 13 -  38779656 aa---a------tt---aC-AC--T------T--AC
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134077823 13 - 275406953 AG---A------CT---AC-AT--A------T--AT
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      79038 13 +    140051 AG---A------CT---AC-AT--A------T--AT
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127575289 13 - 205426864 aG---A------TT---AC-AT--A------C--AT
i Pan_paniscus.CM003386.1                               I 3 C 0
s Pan_troglodytes.CM009241.2                            120152443 13 - 196562556 aG---A------TT---AC-AT--A------C--AT
i Pan_troglodytes.CM009241.2                            I 3 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  34867 13 +    295523 GA---A------CT---at-ag--a------t--ag
i Panthera_onca.PanOnc_flattened_line_1615              C 0 I 28
s Panthera_pardus.KV860323.1                              3638601 13 +  18214204 ga---a------ct---at-ag--a------t--ag
i Panthera_pardus.KV860323.1                            C 0 I 44
s Panthera_tigris.KE721879.1                              5028276 13 -   6340057 ga---a------ct---at-ag--a------t--ag
i Panthera_tigris.KE721879.1                            C 0 I 44
s Pantholops_hodgsonii.KE114631.1                         1066673 13 -   1292953 AG---A------CT---AC-AT--A------T--AT
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188156907 13 - 188283584 ag---a------TT---AT-AT--A------C--AT
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             5224 13 +      5367 AG---A------TT---AT-AT--A------C--AT
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47514292 13 +  47705337 AG---A------TT---AT-AT--A------C--AT
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 68268 13 -    104429 AG---A------TT---AT-AT--A------C--AT
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    6804 13 +     14967 AG---A------TT---AT-AT--A------C--AT
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 2663 13 -      7628 AG---A------TT---AT-AT--A------C--AT
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    116358 13 -    135482 GA---A------CT---AC-AT--A------T--AT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 I 1
s Perodicticus_ibeanus.k141_117958                           6146 13 -     23713 AA---A------TT---AG-AC--T------T--GT
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            25460 13 -     27972 AA---A------TT---AG-AC--T------T--GT
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359        600 13 +     49596 CA---A------TG---AC-AT--A------T--GT
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4950890  9 -   8017169 AT---A------TT---CC-AT--------------
i Peromyscus_maniculatus.KI615518.1                     C 0 I 1
s Petromus_typicus.PetTyp_scaffold_33007                    14178 15 -     36578 AG---A------TT---AT-AT--A----TGT--AT
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            121861 13 -    122454 AG---A------CT---AC-GT--A------T--AC
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1987485                           2690 13 -      5908 AT---A------TT---AT-AT--A------C--AT
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       3314 13 -     17985 AT---A------TT---AT-AT--A------C--AT
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            2681 13 +      7694 AT---A------TT---AT-AT--A------C--AT
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26741159 13 +  26888534 at---a------tt---at-at--a------c--at
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            98472 13 +    112873 AG---A------CT---AT-AT--A------T--AT
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             44420 13 -     61926 AG---A------TC---AC-AT--A------T--AT
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        25805 13 +     78826 AG---A------TC---AC-AT--A------T--AT
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              9852 13 -     15800 AG---A------TC---AC-AT--A------T--AT
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        13051 13 -     16101 AG---A------TC---AC-AT--A------T--AT
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          6279 13 +      9673 AG---A------TC---AC-AT--A------T--AT
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13475279 13 -  19735023 AG---A------TC---AC-AT--A------T--AT
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           14182 13 -     31692 AG---A------TC---AC-AT--A------T--AT
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           5948 13 +     21690 AG---A------CT---AC-GT--A------T--AT
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       23522 13 +     44506 AG---A------TC---AC-AT--A------T--AT
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        23734 13 +     67491 AG---A------TC---AC-AT--A------T--AT
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      13974 13 -     98129 AG---A------TC---AC-AT--A------T--AT
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     23574 13 +    147771 AG---A------TC---AC-AT--A------T--AT
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                          210 13 -     43940 AG---A------TC---AC-AT--A------T--AT
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          4293 13 -     55515 AG---A------TC---AC-AT--A------T--AT
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         23647 13 +    152463 AG---A------TC---AC-AT--A------T--AT
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       1364 13 -    119457 AG---A------TC---AC-AT--A------T--AT
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         13370 13 +    134592 AG---A------TC---AC-AT--A------T--AT
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          23957 13 -     75465 AG---A------TC---AC-AT--A------T--AT
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              187809 13 -    373494 ag---a------TT---AC-AT--A------C--AT
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19808457 13 +  19899266 AG---A------TT---AC-AT--A------C--AT
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               6420 13 -     15069 AT---A------TT---AT-AT--A------C--AT
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              6550 13 +     14865 AT---A------TT---AT-AT--A------C--AT
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6849314 10 +  12164890 ------------tt---ac-ac--T------T--AC
i Prolemur_simus.MPIZ01000048.1                         I 2 C 0
s Propithecus_coquerelli.NW_012147863.1                     19481 10 -     30946 ------------nn---nn-nn--n------n--nn
i Propithecus_coquerelli.NW_012147863.1                 I 2 C 0
s Propithecus_coronatus.k141_1353159                         4391 10 +     11805 ------------TT---AT-AT--T------T--AT
i Propithecus_coronatus.k141_1353159                    I 2 C 0
s Propithecus_diadema.k141_577245                           43734 10 +     52369 ------------TT---AT-AC--T------T--AT
i Propithecus_diadema.k141_577245                       I 2 C 0
s Propithecus_edwardsi.k141_1317105                         36121 10 -     44753 ------------TT---AT-AC--T------T--AT
i Propithecus_edwardsi.k141_1317105                     I 2 C 0
s Propithecus_perrieri.k141_7554                            18044 10 +     27322 ------------TT---AT-AC--T------T--AT
i Propithecus_perrieri.k141_7554                        I 2 C 0
s Propithecus_tattersalli.k141_907138                       17678 10 -     53241 ------------TT---AT-AT--T------T--AT
i Propithecus_tattersalli.k141_907138                   I 2 C 0
s Propithecus_verreauxi.k141_158021                         39942 10 -     48185 ------------TT---AT-AT--T------T--AT
i Propithecus_verreauxi.k141_158021                     I 2 C 0
s Psammomys_obesus.NESX01026517.1                           35771  8 +     77221 AT---A------TT---C--AT--------------
i Psammomys_obesus.NESX01026517.1                       C 0 I 265
s Pteronotus_parnellii.KE867983.1                            4632 11 -     27784 ag---a------cc---A---T--A------T--AT
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        247243 13 -    344369 GG---A------CT---GC-AT--A------T--AT
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 I 1
s Pteropus_alecto.KB031157.1                             13246542 13 -  17261082 ag---a------ct---ac-AT--A------T--AT
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             604493 13 -   3946241 ag---a------ct---ac-aT--A------T--AT
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131534881 13 - 161321710 ga---a------ct---at-ag--a------t--ag
i Puma_concolor.QAVW01000427.1                          C 0 I 36
s Pygathrix_cinerea.k141_374971                             30541 13 +     56732 AT---A------TT---AT-AT--A------C--AT
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6807029 13 +   6970761 AT---A------TT---AT-AT--A------C--AT
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             6420 13 +     18040 AT---A------TT---AT-AT--A------C--AT
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                16341 13 +     68503 AG---A------CT---AC-AT--A------T--AT
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1788405 13 +   2252614 gg---a------CT---AC-AT--A------T--GT
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                             830 13 -     17045 AT---A------TT---AT-AT--A------C--AT
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206378307 13 - 206558726 at---a------tt---at-at--a------c--at
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44857221 13 -  45163003 AT---A------TT---AT-AT--A------C--AT
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                19873 13 +    109198 AG---A------CT---AC-AT--A------T--AT
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       8498 13 +     12214 AG---A------CT---AC-AT--A------T--AT
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15673379 13 -  43202129 AG---A------TC---AC-AT--A------T--AT
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        5292 13 +     34089 AG---A------TC---AC-AT--A------T--AT
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              5234 13 -     60842 AG---A------TC---AC-AT--A------T--AT
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              5327 13 +     67014 AG---A------TC---AC-AT--A------T--AT
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              5305 13 +     60816 AG---A------TC---AC-AT--A------T--AT
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 5242 13 -     76454 AG---A------TC---AC-AT--A------T--AT
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17341969 13 -  30362882 AG---A------TC---AC-AT--A------T--AT
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         21330 13 -     62485 AG---A------TC---AC-AT--A------T--AT
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   32830 13 -    114521 AA---A------CT---AC-AC--A------T--TT
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        4033 13 +     15331 AT---A------TT---AT-AT--A------C--AT
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       9426 13 +     20762 AT---A------TT---AT-AT--A------C--AT
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         119429 13 +    130994 AT---A------TT---AT-AT--A------C--AT
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           38215 13 +     46263 AT---A------TT---AT-AT--A------C--AT
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     31335 13 +     42640 AT---A------TT---AT-AT--A------C--AT
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        14375 13 +     30600 AT---A------TT---AT-AT--A------C--AT
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  100826  9 -    120886 AT---A------TT---TC-AT--------------
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 I 1
s Solenodon_paradoxus.SolPar_flattened_line_1012            19436 13 +    739146 CA---G------TT---AC-AT--A------G--GT
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17767011 13 -  27805282 ag---a------CT---AA-AT--A------T--AT
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2240326 13 +   2842873 GG---A------TT---AC-AT--T------T--AT
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             235367 13 -    276980 GG---A------CT---GC-CT--A------T--AT
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 I 1
s Suricata_suricatta.SurSur_flattened_line_20339            28131 13 +     62062 GA---A------CT---AC-AT--A------T--AT
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 I 1
s Sus_scrofa.CM000824.4                                 189272651 13 + 218635234 ag---a------tt---ac-AT--A------T--AT
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        15565 13 -  13920577 AG---A------TT---AC-AT--A------C--AT
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                 819 13 +     20549 AA---A------TT---AT-AT--A------T--AT
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               15250  7 +     45698 AG---A------TT---T---C--------------
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      807678 13 +   1148477 AG---A------CT---AC-AC--A------T--AT
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  58390 13 +     99546 AG---A------CT---AC-AC--A------T--AT
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               27042 13 +     42269 AG---A------TT---GC-AC--A------T--GT
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               60358 13 +     65473 AG---A------TT---GC-AC--A------T--GT
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194008429 13 - 194193292 ag---a------TT---AT-AT--A------C--AT
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  6053 11 +      6782 AG---A------GT---T---T--A------G--AT
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  136626 11 -    259118 AA---A------TT---A---T--A------T--AT
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        27531 13 +     38948 AT---A------TT---AT-AT--A------C--AT
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   21263 13 -     32910 AT---A------TT---AT-AT--A------C--AT
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      2649 13 -     12939 AT---A------TT---AT-AT--A------C--AT
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       2585 13 -     14244 AT---A------TT---AT-AT--A------C--AT
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           43984 13 -     54611 AT---A------TT---AT-AT--A------C--AT
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        1787 13 -     11566 AT---A------TT---AT-AT--A------C--AT
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     3964 13 -     15592 AT---A------TT---AT-AT--A------C--AT
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          2620 13 +     14371 AT---A------TT---AT-AT--A------C--AT
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                    901 13 +     12481 AT---A------TT---AT-AT--A------C--AT
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                         777 13 -     24393 AT---A------TT---AT-AT--A------C--AT
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       6023 13 -     28054 AT---A------TT---AT-AT--A------C--AT
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44660823 13 -  44834318 AT---A------TT---AT-AT--A------C--AT
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       3131 13 +     13828 AT---A------TT---AT-AT--A------C--AT
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   5702 13 +     90398 AG---A------CT---AC-CT--A------T--AT
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16085889 13 +  31416278 ag---a------tt---GC-AT--G------T--AT
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2793669 13 -   3938065 ga---a------tt---ac-at--a------t--at
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    5855 13 +     13056 GA---A------TT---AC-AT--A------T--AT
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69313973 13 -  96451834 ag---a------cT---AC-GT--A------T--AC
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   1867 19 +     10241 AA---AAAAACCCT---AC-GC--A------C--AT
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6515368 13 +  28682327 cg---A------CT---GC-AT--A------T--AT
i Ursus_maritimus.KK498671.1                            C 0 I 1
s Varecia_rubra.k141_432109                                  5955 10 -     20643 ------------TT---AC-AC--T------T--AC
i Varecia_rubra.k141_432109                             I 2 C 0
s Varecia_variegata.k141_775891                             25490 10 -     33872 ------------TT---AC-AC--T------T--AC
i Varecia_variegata.k141_775891                         I 2 C 0
s Vicugna_pacos.KN269600.1                                1525221 13 -   2331223 ag---a------ct---ac-at--g------t--at
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                138858 13 -    281493 GG---A------CA---AC-CT--A------C--AT
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 I 1
s Xerus_inauris.XerIna_scaffold_7898                       127441 13 -    134049 GG---A------TT---AC-AT--T------T--AC
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        214838 13 -    227762 GG---A------CG---GC-AT--A------T--AT
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 I 1
s Zapus_hudsonius.ZapHud_scaffold_64392                     16386 13 -     20485 GG---A------TT---GC-AT--A------T--AT
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           7472 13 -      8775 AG---A------CT---AC-AT--A------T--AC
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                701732 90 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             39403  0 -     47444 C
e Procavia_capensis.ProCapCap_scaffold_149274                2467 1156 -      9567 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Megaderma_lyra.MegLyr_scaffold_3562                       64783 239 -    234502 I
e Heterohyrax_brucei.HetBruBak_scaffold_25354               61360 1157 +     73687 I
e Elephantulus_edwardii.JH947210.1                        7816992 12417 +  15467074 I
e Crocidura_indochinensis.CroInd_scaffold_848148              199  0 +      1327 C
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1008 325 -      5782 I
e Hylobates_klossii.k141_285563                               343 193 +      1026 I
e Microtus_ochrogaster.CM001673.1                        22820341  4 -  98408828 I
e Rattus_norvegicus.chr11                                13915860 1475 +  90463843 I
e Ondatra_zibethicus.OndZib_scaffold_6821                  125594  4 +    145789 I
e Nannospalax_galili.KL201303.1                            119159  6 +    362372 I
e Graphiurus_murinus.GraMur_scaffold_4493                   77863  0 +    118900 C
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I
e Ellobius_talpinus.LOJH01090055.1                           7151  4 -      7838 I
e Ellobius_lutescens.LOEQ01003611.1                        240029  1 -    369425 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               12416  4 +    209709 AT---------------------------T-G
s Acinonyx_jubatus.LLWD01000356.1                         2034575  4 +   3721120 at---------------------------a-g
i Acinonyx_jubatus.LLWD01000356.1                       I 20 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    113317  4 -    189883 AA---------------------------T-A
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 222 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10657890  4 +  23371972 AT---------------------------T-G
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 1 C 0
s Ailurus_fulgens.LNAC01000003.1                          7095242  4 -  16596857 AT---------------------------T-G
i Ailurus_fulgens.LNAC01000003.1                        I 1 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   17489  4 -     22067 AA---------------------------T-G
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   1933  4 -     60446 AT---------------------------T-G
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         2653  4 -     29318 AT---------------------------T-G
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         1588  4 +     38766 AT---------------------------T-G
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          2547  4 -     80423 AT---------------------------T-G
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            10847  4 -     18050 AT---------------------------T-G
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_1710068                                564  4 +      1555 AT---------------------------A-G
i Alouatta_caraya.k141_1710068                          C 0 C 0
s Alouatta_discolor.k141_811576                             11520  4 -     21359 AT---------------------------T-G
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                1143  4 +      2129 AT---------------------------T-G
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_2177643                           527  4 -      1868 AT---------------------------T-G
i Alouatta_macconnelli.k141_2177643                     C 0 C 0
s Alouatta_nigerrima.k141_3537692                             576  4 +      1660 AT---------------------------T-G
i Alouatta_nigerrima.k141_3537692                       C 0 C 0
s Alouatta_palliata.k141_2764429                              489  4 -      1480 AT---------------------------T-G
i Alouatta_palliata.k141_2764429                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            4569  4 -      4927 AT---------------------------T-G
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_1531728                             704  4 -      1692 AT---------------------------T-G
i Alouatta_seniculus.k141_1531728                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3520685  4 +   4113121 AT---------------------------T-G
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      391088  4 -    631301 AT---------------------------T-G
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            31267  4 +     33004 AT---------------------------T-G
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 63199  4 +     78111 TT---------------------------T-G
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            6141  4 +     22701 TT---------------------------T-G
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5750098  4 +   9889416 TT---------------------------T-G
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             6687  4 -    104377 AT---------------------------T-G
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               6689  4 +     23246 AT---------------------------T-G
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     4243  4 +      5067 AA---------------------------T-T
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        1752  1 +      9265 G-------------------------------
i Arctocebus_calabarensis.k141_587554                   C 0 I 3
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 9504  4 -     29036 AT---------------------------T-G
i Artibeus_jamaicensis.ArtJam_scaffold_41619            I 1 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9539958  4 +  39197703 AT---------------------------T-G
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             61229  4 +     85812 AC---------------------------T-G
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                12242  4 +     89302 AT---------------------------T-G
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             16745  4 -     58268 AT---------------------------T-G
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             64737  4 +    119057 AT---------------------------T-G
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               6708  4 -     25888 AT---------------------------T-G
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 7488  1 -     16375 T-------------------------------
i Avahi_laniger.k141_2840928                            C 0 I 3
s Avahi_peyrierasi.k141_798820                               1104  1 +      6337 T-------------------------------
i Avahi_peyrierasi.k141_798820                          C 0 I 3
s Balaenoptera_acutorostrata.KI537095.1                  26380759  4 +  51448160 AT---------------------------T-G
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        5931  4 -     13118 AT---------------------------T-G
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   43795  4 -     72089 AT---------------------------T-G
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6560411  4 +   6870073 AT---------------------------T-G
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138140526  4 - 161108492 AT---------------------------T-G
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     573067  4 -    998990 AT---------------------------T-G
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136296259  4 - 158972876 AT---------------------------T-G
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1233339  4 -   1914593 AT---------------------------T-G
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               114595  4 -    171031 AT---------------------------T-G
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 13624  4 +    125063 AT---------------------------T-G
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                15667  4 -    216513 AT---------------------------T-G
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        8210  4 -    134917 AT---------------------------T-G
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3220130  4 -   8989139 tt---------------------------c-t
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           397831  4 -  15254737 tt---------------------------c-t
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2973567  4 +   6889770 tt---------------------------c-t
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11520034  3 +  39901454 -T---------------------------T-G
i CanFam4.chr31                                         I 1 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   15059  3 +     87036 -T---------------------------T-G
i Canis_lupus_VD.CanFam_VD_scaffold_16982               I 1 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11266701  3 -  35597290 -T---------------------------T-G
i Canis_lupus_dingo.QKWQ01001993.1                      I 1 C 0
s Canis_lupus_familiaris.chr31                           11089235  3 +  39895921 -T---------------------------T-G
i Canis_lupus_familiaris.chr31                          I 1 C 0
s Canis_lupus_orion.HG994411.1                           16456250  3 -  44759192 -T---------------------------T-G
i Canis_lupus_orion.HG994411.1                          I 1 C 0
s Capra_aegagrus.CM003214.1                              21325760  4 + 157394656 AT---------------------------T-G
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135706988  4 - 157403528 AT---------------------------T-G
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          309603  4 +    345090 AT---------------------------T-T
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               60291  4 +     67245 AT---------------------------T-G
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   31682  4 +     33760 AA---------------------------T-T
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   159444  4 -    276539 AT---------------------------A-A
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15787208  4 -  24422027 AA---------------------------T-A
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15799144  4 -  24440124 AA---------------------------T-A
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       177335  4 +    436027 AA---------------------------T-A
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18891437  4 -  29618158 AT---------------------------T-G
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 8981  4 -     26817 AT---------------------------T-G
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                13224  4 +     25043 AT---------------------------T-G
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         8627  4 +     21754 AT---------------------------T-T
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4364453  4 +   7569818 AT---------------------------T-G
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         4210  4 -      9338 AT---------------------------T-G
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6555879  4 +   6739814 AT---------------------------T-G
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      27356  4 +     60454 AT---------------------------T-G
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          2562  4 -     21101 AT---------------------------T-G
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         59871  4 -    107033 AT---------------------------T-G
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        2761  4 -     17608 AT---------------------------T-G
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          30257  4 +     30494 AT---------------------------T-G
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2157192                              3  4 +     26591 AT---------------------------T-G
i Cercopithecus_diana.k141_2157192                      N 0 C 0
s Cercopithecus_hamlyni.k141_129805                          2803  4 +     16677 AT---------------------------T-G
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           24962  4 +     35983 AT---------------------------T-G
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11991488  4 +  12117833 AT---------------------------T-G
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46478248  4 +  46592721 AT---------------------------T-G
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      41798  4 -     45581 AT---------------------------T-G
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       2804  4 +     35577 AT---------------------------T-G
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        2579  4 -     25661 AT---------------------------T-G
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        2557  4 -     17744 AT---------------------------T-G
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        22174  4 +     37128 AT---------------------------T-G
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           3328  4 -      6963 AT---------------------------T-C
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           59763  1 -     68416 T-------------------------------
i Cheirogaleus_major.k141_1157592                       C 0 I 3
s Cheirogaleus_medius.k141_133808                            8811  1 +     13308 T-------------------------------
i Cheirogaleus_medius.k141_133808                       C 0 I 3
s Cheracebus_lucifer.k141_619653                             6252  4 -     18223 AT---------------------------T-G
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             23270  4 +     25473 AT---------------------------T-G
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           42310  4 +     57117 AT---------------------------T-G
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          46989  4 +     54541 AT---------------------------T-G
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15962297  4 +  43084221 AA---------------------------T-C
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         71796  4 +    196370 AT---------------------------T-G
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          15976  4 +     40510 AT---------------------------T-G
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15140167  4 -  15256731 AT---------------------------T-G
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      34782  4 -     53260 AT---------------------------T-G
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101145335  4 + 101219884 AT---------------------------T-G
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                17027  4 -     21363 AT---------------------------T-C
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           762332  4 +    964067 AT---------------------------T-C
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10887099  4 +  10971483 at---------------------------t-g
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147665264  4 + 156195979 AT---------------------------T-G
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            17249  4 +     23629 AT---------------------------T-G
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60614161  4 +  78930452 AT---------------------------T-G
i Condylura_cristata.JH655880.1                         C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 279104  4 -    399297 TG---------------------------T-G
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53029776  4 +  72327488 TG---------------------------T-G
i Cricetulus_griseus.LT883672.1                         I 1 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            52592  3 -     70449 -T---------------------------T-G
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 1 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  208998  4 -    956709 AA---------------------------T-G
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 31642  4 -     67205 AA---------------------------T-A
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                18338  4 +     26546 GA---------------------------T-A
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             59430  4 -    236241 AA---------------------------T-A
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          184204  4 -   6883506 AT---------------------------T-C
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16845634  1 +  31942871 A-------------------------------
i Daubentonia_madagascariensis.ctg11                    C 0 I 3
s Delphinapterus_leucas.KZ290064.1                       80037383  4 -  96802777 AT---------------------------T-G
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18699574  4 -  18957592 at---------------------------t-g
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 323105  4 +    993696 AT---------------------------T-G
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   3757  4 +    151128 AT---------------------------T-G
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   157565  4 +    228994 AA---------------------------T-T
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3656932  4 +   4240102 aa---------------------------t-a
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 28575  4 +     28912 AA---------------------------T-A
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                36654  4 -     73477 AC---------------------------T-A
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22999499  4 -  44670279 GC---------------------------T-G
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 12821  4 +     24177 AT---------------------------T-G
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1492025  4 +   1727528 AT---------------------------T-G
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Enhydra_lutris.KZ291749.1                              85872766  4 +  99434291 AT---------------------------T-G
i Enhydra_lutris.KZ291749.1                             I 1 C 0
s Eptesicus_fuscus.JH977687.1                             4705229 31 +   6522550 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNN-N
i Eptesicus_fuscus.JH977687.1                           C 0 I 2259
s Equus_asinus.JREZ01000062.1                             5853545  4 -   7175178 AT---------------------------T-G
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13352050  4 +  41866177 AT---------------------------T-G
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          13539  4 +     92910 AT---------------------------T-G
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erythrocebus_patas.Contig8                             48776217  4 -  48907691 AT---------------------------T-G
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          315599  4 +    330699 AT---------------------------T-G
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             62052  4 +     89355 AT---------------------------T-G
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              5809  1 +     13586 T-------------------------------
i Eulemur_albifrons.k141_715837                         C 0 I 3
s Eulemur_collaris.k141_311830                               5741  1 -      6809 T-------------------------------
i Eulemur_collaris.k141_311830                          C 0 I 3
s Eulemur_coronatus.k141_3240342                            12215  1 +     36558 T-------------------------------
i Eulemur_coronatus.k141_3240342                        C 0 I 3
s Eulemur_flavifrons.k141_903901                             8536  1 +     60246 T-------------------------------
i Eulemur_flavifrons.k141_903901                        C 0 I 3
s Eulemur_fulvus.k141_653297                                12014  1 +    109717 T-------------------------------
i Eulemur_fulvus.k141_653297                            C 0 I 3
s Eulemur_macaco.k141_1341545                               16398  1 +     16540 T-------------------------------
i Eulemur_macaco.k141_1341545                           C 0 N 0
s Eulemur_mongoz.k141_825972                                16674  1 +     27497 T-------------------------------
i Eulemur_mongoz.k141_825972                            C 0 I 3
s Eulemur_rubriventer.k141_411740                           19130  1 +     26808 T-------------------------------
i Eulemur_rubriventer.k141_411740                       C 0 I 3
s Eulemur_rufus.k141_1620292                                33868  1 +     46535 T-------------------------------
i Eulemur_rufus.k141_1620292                            C 0 I 3
s Eulemur_sanfordi.k141_186399                              16594  1 -     29447 T-------------------------------
i Eulemur_sanfordi.k141_186399                          C 0 I 3
s Felis_catus.CM001386.2                                129893542  4 - 159252932 at---------------------------a-g
i Felis_catus.CM001386.2                                I 32 C 0
s Felis_catus_fca126.CM031420.1                         129280626  4 - 158578461 at---------------------------a-g
i Felis_catus_fca126.CM031420.1                         I 24 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 21766  4 +     52776 AT---------------------------A-G
i Felis_nigripes.FelNig_flattened_line_8080             I 24 C 0
s Galago_moholi.ctg555                                     211659  1 -    847004 G-------------------------------
i Galago_moholi.ctg555                                  C 0 I 3
s Galago_senegalensis.k141_964197                           14033  1 -     43889 G-------------------------------
i Galago_senegalensis.k141_964197                       C 0 I 3
s Galagoides_demidoff.k141_1769638                          11099  1 +     27357 G-------------------------------
i Galagoides_demidoff.k141_1769638                      C 0 I 3
s Galeopterus_variegatus.GalVar_scaffold_354               156870  4 +    324696 AT---------------------------T-G
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    181830  4 -    189561 AT---------------------------T-G
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           14327  4 -     18683 AA---------------------------T-G
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               5936  4 -     14630 AT---------------------------T-G
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119653036  4 - 195582420 AT---------------------------T-G
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         2595  1 +     10286 T-------------------------------
i Hapalemur_alaotrensis.k141_1280836                    C 0 I 3
s Hapalemur_gilberti.k141_279011                             1075  1 -     11661 T-------------------------------
i Hapalemur_gilberti.k141_279011                        C 0 I 3
s Hapalemur_griseus.k141_1387522                             6401  1 +     56096 T-------------------------------
i Hapalemur_griseus.k141_1387522                        C 0 I 3
s Hapalemur_meridionalis.k141_186231                        29650  1 -     42470 T-------------------------------
i Hapalemur_meridionalis.k141_186231                    C 0 I 3
s Hapalemur_occidentalis.k141_797938                        46278  1 -     54384 T-------------------------------
i Hapalemur_occidentalis.k141_797938                    C 0 I 3
s Helogale_parvula.HelPar_flattened_line_22962              17790  3 +     53719 -T---------------------------T-G
i Helogale_parvula.HelPar_flattened_line_22962          I 1 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                28045  4 -     91191 AT---------------------------T-G
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2551661  4 +  31725842 aa---------------------------t-a
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              147688  4 +    277961 AT---------------------------T-G
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      278966  4 -    477199 AT---------------------------T-G
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              8116  4 -      9143 AT---------------------------T-G
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 C 0
s Hoolock_leuconedys.ctg79                                      5623  4 -   7690867 AT---------------------------T-G
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 17867  3 -     67322 -T---------------------------T-C
i Hyaena_hyaena.HyaHya_flattened_line_20729             I 1 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19563  4 -    119109 AA---------------------------T-A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_164775                               411  4 -      2073 AT---------------------------T-G
i Hylobates_abbotti.k141_164775                         I 7 C 0
s Hylobates_agilis.k141_1878600                               664  4 -      1230 AT---------------------------T-G
i Hylobates_agilis.k141_1878600                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14625317  4 -  25970782 AT---------------------------T-G
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            2573  4 -      2977 AT---------------------------T-G
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             34476  4 -     60944 AT---------------------------T-G
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     6727  4 +     22540 AA---------------------------T-A
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7126423  4 +  13083262 AA---------------------------T-G
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_5141390                                   1121  1 -      3181 T-------------------------------
i Indri_indri.k141_5141390                              C 0 I 3
s Inia_geoffrensis.IniGeo_flattened_line_66725               9588  4 +     17520 AT---------------------------T-G
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8566503  4 +  11848649 AA---------------------------T-G
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               24195  4 +     37189 AT---------------------------T-G
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          50827  4 -    147782 AT---------------------------T-G
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                     893 31 +     26176 atacacacacacacacacacacacacacac-a
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 I 3430
s Lemur_catta.scaffold_1                                258407957  1 - 285822530 T-------------------------------
i Lemur_catta.scaffold_1                                C 0 I 3
s Lepilemur_ankaranensis.k141_884009                        24707  1 +     39228 T-------------------------------
i Lepilemur_ankaranensis.k141_884009                    C 0 I 3
s Lepilemur_dorsalis.k141_134267                            54093  1 +     63517 T-------------------------------
i Lepilemur_dorsalis.k141_134267                        C 0 I 3
s Lepilemur_ruficaudatus.k141_617879                        79355  1 +    116806 T-------------------------------
i Lepilemur_ruficaudatus.k141_617879                    C 0 I 3
s Lepilemur_septentrionalis.k141_578524                     32346  1 -     33031 T-------------------------------
i Lepilemur_septentrionalis.k141_578524                 C 0 I 3
s Leptonychotes_weddellii.KB714749.1                      3086552  4 -   3498232 AT---------------------------T-G
i Leptonychotes_weddellii.KB714749.1                    I 1 C 0
s Lepus_americanus.LepAme_scaffold_62849                    13843  4 +     22452 AA---------------------------G-G
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            136545  4 +   3060487 AT---------------------------T-G
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19248973  4 +  19376315 AT---------------------------T-G
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loxodonta_africana.GL010040.1                          20595380  4 -  62548349 GT---------------------------T-G
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11088691  3 +  39895028 -T---------------------------T-G
i Lycaon_pictus.CM007556.1                              I 1 C 0
s Macaca_arctoides.k141_2201161                             20708  4 +     74745 AT---------------------------T-G
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12707165  4 +  12821369 AT---------------------------T-G
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                2807  4 -      3136 AT---------------------------T-G
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           47622  4 +     63263 AT---------------------------T-G
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                 2330  4 -      2568 AT---------------------------T-G
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 2915  4 -      7381 AT---------------------------T-G
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  46132  4 -     79256 AC---------------------------T-G
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196036239  4 + 196197964 AT---------------------------T-G
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11446409  4 +  11645122 AT---------------------------T-G
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   5079  4 -     46448 AT---------------------------T-G
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                2753  4 -     13212 AT---------------------------T-G
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 16432  4 -     55006 AT---------------------------T-G
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43841548  4 +  43892939 AT---------------------------T-G
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               17718  4 -     24607 AT---------------------------T-G
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               5084  4 -     27140 AT---------------------------T-G
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43438133  4 -  43563597 AT---------------------------T-G
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4450953  4 -   4543643 AT---------------------------T-G
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            146636  4 +    252755 AT---------------------------T-G
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             36779  4 +     58827 at---------------------------t-g
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36874242  4 +  64221397 AA---------------------------T-G
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             1578  4 -     87323 AT---------------------------T-G
i Mellivora_capensis.MelCap_flattened_line_15433        I 1 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               13762  4 +     15977 ag---------------------------a-t
i Meriones_unguiculatus.MerUng_scaffold_52233           I 266 C 0
s Mesocricetus_auratus.KB708139.1                         1047462  4 -  26018355 TA---------------------------T-G
i Mesocricetus_auratus.KB708139.1                       I 1 C 0
s Mesoplodon_bidens.MesBid_scaffold_227248                    872  4 -      1377 AT---------------------------T-G
i Mesoplodon_bidens.MesBid_scaffold_227248              C 0 C 0
s Microcebus_murinus.CM007691.1                          16510979  1 +  47401472 T-------------------------------
i Microcebus_murinus.CM007691.1                         C 0 I 3
s Microgale_talazaci.MicTal_scaffold_34660                  35491  4 -     48017 AT---------------------------T-G
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               23480  4 -     32043 AT---------------------------T-G
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8210651  4 +  10048721 at---------------------------t-g
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            35140  4 +     45743 AT---------------------------T-G
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         2682  4 +     29742 AT---------------------------T-G
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        12068  4 -    104932 AT---------------------------T-G
i Mirounga_angustirostris.MirAng_flattened_line_8852    I 1 C 0
s Mirza_zaza.k141_226143                                     6368  1 +      8497 T-------------------------------
i Mirza_zaza.k141_226143                                C 0 I 3
s Monodon_monoceros.MonMon_M_scaffold_5598                 146973  4 +    154973 AT---------------------------T-G
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                162004  4 +    265003 AT---------------------------T-G
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  2060  4 -     19904 AT---------------------------T-G
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  145485  3 -    168139 -T---------------------------T-G
i Mungos_mungo.MunMun_flattened_line_8729               I 1 C 0
s Murina_feae.MurFea_scaffold_2254                          20095  2 -    100666 -----------------------------t-a
i Murina_feae.MurFea_scaffold_2254                      C 0 I 1911
s Mus_caroli.LT608236.1                                  70767296  4 +  92629107 ag---------------------------g-g
i Mus_caroli.LT608236.1                                 I 188 C 0
s Mus_musculus.chr16                                     75490372  4 +  98207768 ag---------------------------g-g
i Mus_musculus.chr16                                    I 204 C 0
s Mus_pahari.LT608305.1                                  67556575  4 +  89017189 ag---------------------------g-g
i Mus_pahari.LT608305.1                                 I 179 C 0
s Mus_spretus.CM004110.1                                 74333107  4 +  97876770 ag---------------------------g-g
i Mus_spretus.CM004110.1                                I 1764 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             12832  4 +     98495 AA---------------------------T-T
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4424946  4 -  28371801 AT---------------------------T-G
i Mustela_putorius.JH417978.1                           I 1 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     90681  4 -    117718 AA---------------------------C-T
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 I 289
s Myotis_brandtii.KE161952.1                               968627  2 +   8389877 -----------------------------t-a
i Myotis_brandtii.KE161952.1                            C 0 I 997
s Myotis_davidii.KB114863.1                               5020302  2 +   6462685 -----------------------------t-a
i Myotis_davidii.KB114863.1                             C 0 I 746
s Myotis_lucifugus.GL429887.1                             3466211  2 -   3747815 -----------------------------t-a
i Myotis_lucifugus.GL429887.1                           C 0 I 915
s Myotis_myotis.MyoMyo_scaffold_6123                        11421  2 +     66751 -----------------------------t-a
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 I 948
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             5591  4 -      8794 AT---------------------------T-C
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nasalis_larvatus.k141_153429                               9189  4 +     48152 AT---------------------------T-G
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4485458  4 -  14209539 AT---------------------------T-G
i Neomonachus_schauinslandi.NINY01007774.1              I 1 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3951585  4 -   4490290 AT---------------------------T-G
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Nomascus_annamensis.k141_720788                             571  4 -      1065 AT---------------------------T-G
i Nomascus_annamensis.k141_720788                       C 0 C 0
s Nomascus_concolor.k141_581629                               134  4 -      6578 AT---------------------------T-G
i Nomascus_concolor.k141_581629                         C 0 I 7
s Nomascus_gabriellae.k141_1004198                            442  4 +      1448 AT---------------------------T-G
i Nomascus_gabriellae.k141_1004198                      C 0 C 0
s Nomascus_siki_b.tarseq_80                             25593  4 -  18771707 AT---------------------------T-G
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  3296  4 +      4512 AT---------------------------T-G
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                31492  3 +   3668941 -T---------------------------T-G
i Nyctereutes_procyonoides.CAJHUB010000786.1            I 1 C 0
s Ochotona_princeps.JH802095.1                            4996593 11 -  23139505 aa--------------------tatattaa-g
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3686464  4 +  10294119 aa---------------------------t-a
i Octodon_degus.JH651621.1                              C 0 I 2
s Odobenus_rosmarus.KB229369.1                             680125  4 -   3126709 AT---------------------------T-G
i Odobenus_rosmarus.KB229369.1                          I 1 C 0
s Odocoileus_virginianus.KZ101650.1                       1080240  4 +   1425656 AT---------------------------T-G
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         37558  4 +     78940 AT---------------------------T-G
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  37653  4 +     62360 TG---------------------------T-G
i Onychomys_torridus.OnyTor_scaffold_12578              I 1 C 0
s Orcinus_orca.KB316965.1                                 7225270  4 -   7562323 AT---------------------------T-G
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              60512  4 -     66828 GT---------------------------T-C
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141876880  4 + 163896628 AA---------------------------G-G
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      308776  3 -    505867 -T---------------------------T-G
i Otocyon_megalotis.JAEUCK010005121.1                   I 1 C 0
s Otolemur_crassicaudatus.k141_505435                        1474  1 -     53940 A-------------------------------
i Otolemur_crassicaudatus.k141_505435                   C 0 I 3
s Otolemur_garnettii.GL873528.1                          18009455  1 -  38779656 G-------------------------------
i Otolemur_garnettii.GL873528.1                         C 0 I 3
s Ovis_aries.CM001582.2                                 134077836  4 - 275406953 AT---------------------------T-G
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      79051  4 +    140051 AT---------------------------T-G
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127575302  4 - 205426864 AT---------------------------T-G
i Pan_paniscus.CM003386.1                               C 0 I 1
s Pan_troglodytes.CM009241.2                            120152456  4 - 196562556 AT---------------------------T-G
i Pan_troglodytes.CM009241.2                            C 0 I 65
s Panthera_onca.PanOnc_flattened_line_1615                  34908  4 +    295523 at---------------------------a-g
i Panthera_onca.PanOnc_flattened_line_1615              I 28 C 0
s Panthera_pardus.KV860323.1                              3638658  4 +  18214204 at---------------------------a-g
i Panthera_pardus.KV860323.1                            I 44 C 0
s Panthera_tigris.KE721879.1                              5028333  4 -   6340057 at---------------------------a-g
i Panthera_tigris.KE721879.1                            I 44 C 0
s Pantholops_hodgsonii.KE114631.1                         1066686  4 -   1292953 AT---------------------------T-G
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188156920  4 - 188283584 AT---------------------------T-G
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             5237  4 +      5367 AT---------------------------T-G
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47514305  4 +  47705337 AT---------------------------T-G
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 68281  4 -    104429 AT---------------------------T-G
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    6817  4 +     14967 AT---------------------------T-G
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 2676  4 -      7628 AT---------------------------T-G
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    116372  3 -    135482 -T---------------------------T-G
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 I 1 C 0
s Perodicticus_ibeanus.k141_117958                           6159  1 -     23713 G-------------------------------
i Perodicticus_ibeanus.k141_117958                      C 0 I 3
s Perodicticus_potto.k141_713187                            25473  1 -     27972 G-------------------------------
i Perodicticus_potto.k141_713187                        C 0 I 3
s Perognathus_longimembris.PerPac_flattened_line_19359        613  4 +     49596 AA---------------------------T-A
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4950900  4 -   8017169 TG---------------------------T-G
i Peromyscus_maniculatus.KI615518.1                     I 1 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    14193  4 -     36578 AA---------------------------T-A
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            121874  4 -    122454 AT---------------------------T-G
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1987485                           2703  4 -      5908 AT---------------------------T-G
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       3327  4 -     17985 AT---------------------------T-A
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            2694  4 +      7694 AT---------------------------T-A
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26741172  4 +  26888534 at---------------------------t-g
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            98485 31 +    112873 ATACATATTTACACATATATATATAAATAT-A
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 I 773
s Pithecia_albicans.k141_991845                             44433  4 -     61926 AT---------------------------T-G
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        25818  4 +     78826 AT---------------------------T-G
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              9865  4 -     15800 AT---------------------------T-G
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        13064  4 -     16101 AT---------------------------T-G
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          6292  4 +      9673 AT---------------------------T-G
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13475292  4 -  19735023 AT---------------------------T-G
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           14195  4 -     31692 AT---------------------------T-G
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           5961  4 +     21690 AT---------------------------T-G
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       23535  4 +     44506 AT---------------------------T-G
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        23747  4 +     67491 AT---------------------------T-G
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      13987  4 -     98129 AT---------------------------T-G
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     23587  4 +    147771 AT---------------------------T-G
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                          223  4 -     43940 AT---------------------------T-G
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          4306  4 -     55515 AT---------------------------T-G
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         23660  4 +    152463 AT---------------------------T-G
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       1377  4 -    119457 AT---------------------------T-G
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         13383  4 +    134592 AT---------------------------T-G
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          23970  4 -     75465 AT---------------------------T-G
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              187822  4 -    373494 AT---------------------------T-G
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19808470  4 +  19899266 AT---------------------------T-G
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               6433  4 -     15069 AT---------------------------T-G
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              6563  4 +     14865 AT---------------------------T-G
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6849324  1 +  12164890 T-------------------------------
i Prolemur_simus.MPIZ01000048.1                         C 0 I 3
s Propithecus_coquerelli.NW_012147863.1                     19491  1 -     30946 n-------------------------------
i Propithecus_coquerelli.NW_012147863.1                 C 0 I 3
s Propithecus_coronatus.k141_1353159                         4401  1 +     11805 T-------------------------------
i Propithecus_coronatus.k141_1353159                    C 0 I 3
s Propithecus_diadema.k141_577245                           43744  1 +     52369 T-------------------------------
i Propithecus_diadema.k141_577245                       C 0 I 3
s Propithecus_edwardsi.k141_1317105                         36131  1 -     44753 T-------------------------------
i Propithecus_edwardsi.k141_1317105                     C 0 I 3
s Propithecus_perrieri.k141_7554                            18054  1 +     27322 T-------------------------------
i Propithecus_perrieri.k141_7554                        C 0 I 3
s Propithecus_tattersalli.k141_907138                       17688  1 -     53241 T-------------------------------
i Propithecus_tattersalli.k141_907138                   C 0 I 3
s Propithecus_verreauxi.k141_158021                         39952  1 -     48185 T-------------------------------
i Propithecus_verreauxi.k141_158021                     C 0 I 3
s Psammomys_obesus.NESX01026517.1                           36044  4 +     77221 ag---------------------------a-a
i Psammomys_obesus.NESX01026517.1                       I 265 C 0
s Pteronotus_parnellii.KE867983.1                            4643  4 -     27784 AT---------------------------T-G
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        247257  4 -    344369 AT---------------------------T-G
i Pteronura_brasiliensis.PteBra_flattened_line_1343     I 1 C 0
s Pteropus_alecto.KB031157.1                             13246555  4 -  17261082 AT---------------------------T-G
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             604506  4 -   3946241 AT---------------------------T-G
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131534930  4 - 161321710 at---------------------------a-g
i Puma_concolor.QAVW01000427.1                          I 36 C 0
s Pygathrix_cinerea.k141_374971                             30554  4 +     56732 AT---------------------------T-G
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6807042  4 +   6970761 AT---------------------------T-G
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             6433  4 +     18040 AT---------------------------T-G
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                16354  4 +     68503 AT---------------------------T-G
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1788418  4 +   2252614 AT---------------------------T-G
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                             843  4 -     17045 AT---------------------------T-G
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206378320  4 - 206558726 at---------------------------t-g
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44857234  4 -  45163003 AT---------------------------T-G
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                19886  4 +    109198 AT---------------------------T-G
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       8511  4 +     12214 AT---------------------------T-G
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15673392  4 -  43202129 AT---------------------------T-G
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        5305  4 +     34089 AT---------------------------T-G
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              5247  4 -     60842 AT---------------------------T-G
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              5340  4 +     67014 AT---------------------------T-G
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              5318  4 +     60816 AT---------------------------T-G
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 5255  4 -     76454 AT---------------------------T-G
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17341982  4 -  30362882 AT---------------------------T-G
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         21343  4 -     62485 AT---------------------------T-G
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   32843  4 -    114521 GT---------------------------T-G
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        4046  4 +     15331 AT---------------------------T-G
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       9439  4 +     20762 AT---------------------------T-G
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         119442  4 +    130994 AT---------------------------T-G
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           38228  4 +     46263 AT---------------------------T-G
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     31348  4 +     42640 AT---------------------------T-G
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        14388  4 +     30600 AT---------------------------T-G
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  100836  4 -    120886 TG---------------------------T-G
i Sigmodon_hispidus.SigHis_scaffold_11332               I 1 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            19449  4 +    739146 AT---------------------------T-G
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17767024  4 -  27805282 AC---------------------------T-C
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2240339  4 +   2842873 AA---------------------------T-G
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             235381  4 -    276980 AT---------------------------T-G
i Spilogale_gracilis.SpiGra_flattened_line_905          I 1 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            28145  3 +     62062 -T---------------------------T-G
i Suricata_suricatta.SurSur_flattened_line_20339        I 1 C 0
s Sus_scrofa.CM000824.4                                 189272664  4 + 218635234 AT---------------------------C-A
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        15578  4 -  13920577 AT---------------------------T-G
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                 832  4 +     20549 AT---------------------------A-T
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               15257  4 +     45698 AT---------------------------T-C
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      807691  4 +   1148477 AT---------------------------T-G
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  58403  4 +     99546 AT---------------------------T-G
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               27055  4 +     42269 AT---------------------------T-T
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               60371  4 +     65473 AT---------------------------T-T
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194008442  4 - 194193292 AT---------------------------T-G
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             39403  4 -     47444 AA---------------------------T-A
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  6064  4 +      6782 AA---------------------------G-T
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  136637  4 -    259118 AT---------------------------T-G
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        27544  4 +     38948 AT---------------------------T-G
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   21276  4 -     32910 AT---------------------------T-G
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      2662  4 -     12939 AT---------------------------T-G
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       2598  4 -     14244 AT---------------------------T-G
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           43997  4 -     54611 AT---------------------------T-G
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        1800  4 -     11566 AT---------------------------T-G
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     3977  4 -     15592 AT---------------------------T-G
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          2633  4 +     14371 AT---------------------------T-G
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                    914  4 +     12481 AT---------------------------T-G
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                         790  4 -     24393 AT---------------------------T-G
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       6036  4 -     28054 AT---------------------------T-G
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44660836  4 -  44834318 AT---------------------------T-G
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       3144  4 +     13828 AT---------------------------T-G
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   5715  4 +     90398 AT---------------------------T-G
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16085902  4 +  31416278 GT---------------------------T-G
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2793682  5 -   3938065 at---------------------------ttt
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    5868  5 +     13056 AT---------------------------TTT
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69313986  4 -  96451834 AT---------------------------T-G
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   1886  4 +     10241 AT---------------------------T-G
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6515382  4 +  28682327 AT---------------------------T-G
i Ursus_maritimus.KK498671.1                            I 1 C 0
s Varecia_rubra.k141_432109                                  5965  1 -     20643 T-------------------------------
i Varecia_rubra.k141_432109                             C 0 I 3
s Varecia_variegata.k141_775891                             25500  1 -     33872 T-------------------------------
i Varecia_variegata.k141_775891                         C 0 I 3
s Vicugna_pacos.KN269600.1                                1525234  4 -   2331223 tt---------------------------a-t
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                138872  3 -    281493 -T---------------------------T-G
i Vulpes_lagopus.VulLag_flattened_line_2045             I 1 C 0
s Xerus_inauris.XerIna_scaffold_7898                       127454  4 -    134049 GA---------------------------T-G
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        214852  4 -    227762 AT---------------------------T-G
i Zalophus_californianus.ZalCal_flattened_line_4097     I 1 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     16399  4 -     20485 AA---------------------------T-G
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           7485  4 -      8775 AT---------------------------T-G
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                701732 90 +    802869 I
e Erinaceus_europaeus.JH835290.1                         11534830  0 +  16010500 C
e Procavia_capensis.ProCapCap_scaffold_149274                2467 1156 -      9567 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Megaderma_lyra.MegLyr_scaffold_3562                       64783 239 -    234502 I
e Heterohyrax_brucei.HetBruBak_scaffold_25354               61360 1157 +     73687 I
e Elephantulus_edwardii.JH947210.1                        7816992 12417 +  15467074 I
e Crocidura_indochinensis.CroInd_scaffold_848148              199  0 +      1327 C
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1008 325 -      5782 I
e Hylobates_klossii.k141_285563                               343 193 +      1026 I
e Microtus_ochrogaster.CM001673.1                        22820341  4 -  98408828 I
e Rattus_norvegicus.chr11                                13915860 1475 +  90463843 I
e Ondatra_zibethicus.OndZib_scaffold_6821                  125594  4 +    145789 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65670190  0 +  89412551 C
e Nycticebus_coucang.k141_2051882                            4581  0 +      6470 C
e Nycticebus_bengalensis.LG16                            65567855  0 -  95554990 C
e Nannospalax_galili.KL201303.1                            119159  6 +    362372 I
e Loris_tardigradus.ctg97                                 3779150  0 +   6799190 C
e Loris_lydekkerianus.k141_550999                           11401  0 +     84689 C
e Graphiurus_murinus.GraMur_scaffold_4493                   77863  0 +    118900 C
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I
e Ellobius_talpinus.LOJH01090055.1                           7151  4 -      7838 I
e Ellobius_lutescens.LOEQ01003611.1                        240029  1 -    369425 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               12420 33 +    209709 AC-----------C-T-C-TTTGAGAACCttatttttttcttttttt
s Acinonyx_jubatus.LLWD01000356.1                         2034579  6 +   3721120 at-----------c-t-t-t---------------------------
i Acinonyx_jubatus.LLWD01000356.1                       C 0 I 9
s Acomys_cahirinus.AcoCah_scaffold_1625                    113321  7 -    189883 AT-----------G-T-C-AC--------------------------
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10657894  6 +  23371972 AT-----------C-T-T-T---------------------------
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 I 1
s Ailurus_fulgens.LNAC01000003.1                          7095246  6 -  16596857 AT-----------C-T-T-T---------------------------
i Ailurus_fulgens.LNAC01000003.1                        C 0 I 1
s Allactaga_bullata.AllBul_scaffold_70162                   17493  7 -     22067 GT-----------G-G-C-TC--------------------------
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   1937  7 -     60446 AC-----------C-T-C-TT--------------------------
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         2657  7 -     29318 AC-----------C-T-C-TT--------------------------
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         1592  7 +     38766 AC-----------C-T-C-TT--------------------------
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          2551  7 -     80423 AC-----------C-T-C-TT--------------------------
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            10851  7 -     18050 AT-----------C-T-C-TT--------------------------
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_1710068                                568  7 +      1555 AT-----------C-T-C-TT--------------------------
i Alouatta_caraya.k141_1710068                          C 0 C 0
s Alouatta_discolor.k141_811576                             11524  7 -     21359 AT-----------C-T-C-TT--------------------------
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                1147  7 +      2129 AT-----------C-T-C-TT--------------------------
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_2177643                           531  7 -      1868 AT-----------C-T-C-TT--------------------------
i Alouatta_macconnelli.k141_2177643                     C 0 C 0
s Alouatta_nigerrima.k141_3537692                             580  7 +      1660 AT-----------C-T-C-TT--------------------------
i Alouatta_nigerrima.k141_3537692                       C 0 C 0
s Alouatta_palliata.k141_2764429                              493  7 -      1480 AT-----------C-T-C-TT--------------------------
i Alouatta_palliata.k141_2764429                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            4573  7 -      4927 AT-----------C-T-C-TT--------------------------
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_1531728                             708  7 -      1692 AT-----------C-T-C-TT--------------------------
i Alouatta_seniculus.k141_1531728                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3520689  5 +   4113121 AT-----------C-T-C-----------------------------
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      391092  5 -    631301 AT-----------C-T-G-----------------------------
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            31271  5 +     33004 AT-----------C-T-C-----------------------------
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 63203  7 +     78111 AT-----------C-G-C-TT--------------------------
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            6145  7 +     22701 AT-----------C-T-C-TT--------------------------
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5750102  7 +   9889416 AT-----------C-T-C-TT--------------------------
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             6691  7 -    104377 AT-----------C-T-C-TT--------------------------
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               6693  7 +     23246 AT-----------C-T-C-TT--------------------------
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     4247  1 +      5067 A----------------------------------------------
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 9508  5 -     29036 AT-----------T-T-C-----------------------------
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9539962  7 +  39197703 AT-----------C-T-C-TT--------------------------
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             61233  7 +     85812 AT-----------C-T-C-TT--------------------------
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                12246  7 +     89302 AT-----------C-T-C-TT--------------------------
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             16749  7 -     58268 AT-----------C-T-C-TT--------------------------
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             64741  7 +    119057 AT-----------C-T-C-TT--------------------------
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               6712  7 -     25888 AT-----------C-T-C-TT--------------------------
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26380763  5 +  51448160 AT-----------C-T-C-----------------------------
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        5935  5 -     13118 AT-----------C-T-C-----------------------------
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   43799  5 -     72089 AT-----------C-T-C-----------------------------
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6560415  5 +   6870073 AT-----------C-T-C-----------------------------
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138140530  5 - 161108492 AT-----------C-T-C-----------------------------
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     573071  5 -    998990 AT-----------T-T-C-----------------------------
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136296263  5 - 158972876 AT-----------C-T-C-----------------------------
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1233343  5 -   1914593 AT-----------C-T-C-----------------------------
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               114599  7 -    171031 AT-----------C-T-C-TT--------------------------
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 13628  7 +    125063 AT-----------C-T-C-TT--------------------------
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                15671  7 -    216513 AT-----------C-T-C-TT--------------------------
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        8214  7 -    134917 AT-----------C-T-C-TT--------------------------
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3220134  5 -   8989139 tt-----------c-t-t-----------------------------
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           397835  5 -  15254737 tt-----------c-t-t-----------------------------
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2973571  5 +   6889770 tt-----------c-t-t-----------------------------
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11520037  6 +  39901454 AT-----------C-T-T-T---------------------------
i CanFam4.chr31                                         C 0 I 1
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   15062  7 +     87036 AT-----------CTT-T-T---------------------------
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 I 1
s Canis_lupus_dingo.QKWQ01001993.1                       11266704  6 -  35597290 AT-----------C-T-T-T---------------------------
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 I 1
s Canis_lupus_familiaris.chr31                           11089238  6 +  39895921 AT-----------C-T-T-T---------------------------
i Canis_lupus_familiaris.chr31                          C 0 I 1
s Canis_lupus_orion.HG994411.1                           16456253  6 -  44759192 AT-----------C-T-T-T---------------------------
i Canis_lupus_orion.HG994411.1                          C 0 I 1
s Capra_aegagrus.CM003214.1                              21325764  5 + 157394656 AT-----------C-T-C-----------------------------
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135706992  5 - 157403528 AT-----------C-T-C-----------------------------
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          309607  7 +    345090 AT-----------A-T-C-TT--------------------------
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               60295  5 +     67245 AT-----------T-T-C-----------------------------
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   31686  7 +     33760 AT-----------T-T-T-TT--------------------------
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   159448  5 -    276539 AT-----------C-T-C-----------------------------
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15787212  7 -  24422027 AT-----------C-T-C-TT--------------------------
i Cavia_aperea.AVPZ01000278.1                           C 0 I 7
s Cavia_porcellus.DS562889.1                             15799148  7 -  24440124 AT-----------C-T-C-TT--------------------------
i Cavia_porcellus.DS562889.1                            C 0 I 7
s Cavia_tschudii.CavTsc_scaffold_488                       177339  7 +    436027 AT-----------C-T-C-TT--------------------------
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 I 7
s Cebus_albifrons.Contig22                               18891441  7 -  29618158 AT-----------C-T-C-TT--------------------------
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 8985  7 -     26817 AT-----------C-T-C-TT--------------------------
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                13228  7 +     25043 AT-----------C-T-C-TT--------------------------
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         8631  7 +     21754 AT-----------T-T-C-TT--------------------------
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4364457  6 +   7569818 AT-----------A-T-C-T---------------------------
i Ceratotherium_simum.JH767818.1                        C 0 I 1
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         4214  6 -      9338 AT-----------A-T-C-T---------------------------
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 I 1
s Cercocebus_atys.KQ010443.1                              6555883  7 +   6739814 AC-----------C-T-C-TT--------------------------
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      27360  7 +     60454 AC-----------C-T-C-TT--------------------------
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          2566  7 -     21101 AC-----------C-T-C-TT--------------------------
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         59875  7 -    107033 AC-----------C-T-C-TT--------------------------
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        2765  7 -     17608 AC-----------C-T-C-TT--------------------------
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          30261  7 +     30494 AC-----------C-T-C-TT--------------------------
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2157192                              7  7 +     26591 AC-----------C-T-C-TT--------------------------
i Cercopithecus_diana.k141_2157192                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          2807  7 +     16677 AC-----------C-T-C-TT--------------------------
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           24966  7 +     35983 AC-----------C-T-C-TT--------------------------
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11991492  7 +  12117833 AC-----------C-T-C-TT--------------------------
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46478252  7 +  46592721 AC-----------C-T-C-TT--------------------------
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      41802  7 -     45581 AC-----------C-T-C-TT--------------------------
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       2808  7 +     35577 AC-----------C-T-C-TT--------------------------
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        2583  7 -     25661 AC-----------C-T-C-TT--------------------------
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        2561  7 -     17744 AC-----------C-T-C-TT--------------------------
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        22178  7 +     37128 AC-----------C-T-C-TT--------------------------
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           3332  4 -      6963 AT-----------C-T-------------------------------
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 I 1
s Cheracebus_lucifer.k141_619653                             6256  7 -     18223 AT-----------C-C-C-TT--------------------------
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             23274  7 +     25473 AT-----------C-C-C-TT--------------------------
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           42314  7 +     57117 AT-----------C-C-C-TT--------------------------
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          46993  7 +     54541 AT-----------C-C-C-TT--------------------------
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15962301  7 +  43084221 AT-----------C-T-G-TT--------------------------
i Chinchilla_lanigera.JH721867.1                        C 0 I 7
s Chiropotes_israelita.k141_1189915                         71800  7 +    196370 AT-----------C-T-C-TT--------------------------
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          15980  7 +     40510 AT-----------C-T-C-TT--------------------------
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15140171  7 -  15256731 AC-----------C-T-C-TT--------------------------
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      34786  7 -     53260 AC-----------C-T-C-TT--------------------------
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101145339  7 + 101219884 AC-----------C-T-C-TT--------------------------
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                17031  7 -     21363 AT-----------C-T-T-GT--------------------------
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           762336  7 +    964067 AT-----------C-T-T-TT--------------------------
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10887103  7 +  10971483 aC-----------C-T-C-TT--------------------------
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147665268  7 + 156195979 AC-----------C-T-C-TT--------------------------
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            17253  7 +     23629 AC-----------C-T-C-TT--------------------------
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60614165  7 +  78930452 AT-----------C-C-CCT---------------------------
i Condylura_cristata.JH655880.1                         C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 279108  7 -    399297 AT-----------G-T-C-AT--------------------------
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53029780  7 +  72327488 AT-----------G-T-C-AT--------------------------
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            52595  6 -     70449 AT-----------C-T-T-T---------------------------
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 I 1
s Ctenodactylus_gundi.CteGun_scaffold_447                  209002  6 -    956709 AT-----------C-T-C-T---------------------------
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 31646  7 -     67205 AT-----------C-T-C-TT--------------------------
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 I 8
s Cuniculus_paca.CunPac_flattened_line_16637                18342  7 +     26546 AT-----------C-T-C-TT--------------------------
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 I 7
s Dasyprocta_punctata.DasPun_flattened_line_634             59434  5 -    236241 AT-----------C-T-C-----------------------------
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 I 7
s Dasypus_novemcinctus.JH568778.1                          184208  4 -   6883506 AT-----------C-T-------------------------------
i Dasypus_novemcinctus.JH568778.1                       C 0 I 1
s Delphinapterus_leucas.KZ290064.1                       80037387  5 -  96802777 AT-----------A-T-C-----------------------------
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18699578  5 -  18957592 at-----------c-t-C-----------------------------
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 323109  6 +    993696 AT-----------A-T-C-T---------------------------
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 I 1
s Diceros_bicornis.DicBicMic_scaffold_9545                   3761  6 +    151128 AT-----------A-T-C-T---------------------------
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 I 1
s Dinomys_branickii.DinBra_scaffold_1996                   157569  7 +    228994 AT-----------G-T-C-TT--------------------------
i Dinomys_branickii.DinBra_scaffold_1996                C 0 I 7
s Dipodomys_ordii.KN672545.1                              3656936  7 +   4240102 at-----------g-t-C-TT--------------------------
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 28579  7 +     28912 AT-----------G-T-C-TT--------------------------
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                36658  7 -     73477 AT-----------C-T-C-TT--------------------------
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 I 7
s Echinops_telfairi.JH980316.1                           22999503  7 -  44670279 AT-----------C-T-T-TT--------------------------
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 12825  6 +     24177 AT-----------T-C-C-T---------------------------
i Eidolon_helvum.KE772537.1                             C 0 I 1
s Elaphurus_davidianus.JRFZ01086400.1                     1492029  5 +   1727528 AT-----------C-T-C-----------------------------
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Enhydra_lutris.KZ291749.1                              85872770  6 +  99434291 AT-----------C-T-T-T---------------------------
i Enhydra_lutris.KZ291749.1                             C 0 I 1
s Eptesicus_fuscus.JH977687.1                             4707519  3 +   6522550 -------------c-t-t-----------------------------
i Eptesicus_fuscus.JH977687.1                           I 2259 C 0
s Equus_asinus.JREZ01000062.1                             5853549  6 -   7175178 AT-----------T-T-C-T---------------------------
i Equus_asinus.JREZ01000062.1                           C 0 I 1
s Equus_caballus.CM000402.2                              13352054  6 +  41866177 AT-----------T-T-C-T---------------------------
i Equus_caballus.CM000402.2                             C 0 I 1
s Equus_przewalskii.ATBW01073585.1                          13543  6 +     92910 AT-----------T-T-C-T---------------------------
i Equus_przewalskii.ATBW01073585.1                      C 0 I 1
s Erinaceus_europaeus.JH835290.1                         11534830  3 +  16010500 ---------------T-C-T---------------------------
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48776221  7 -  48907691 AC-----------C-T-C-TT--------------------------
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          315603  5 +    330699 AT-----------C-T-C-----------------------------
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             62056  5 +     89355 AT-----------C-T-C-----------------------------
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Felis_catus.CM001386.2                                129893546  6 - 159252932 at-----------c-t-t-t---------------------------
i Felis_catus.CM001386.2                                C 0 I 9
s Felis_catus_fca126.CM031420.1                         129280630  6 - 158578461 at-----------c-t-t-t---------------------------
i Felis_catus_fca126.CM031420.1                         C 0 I 9
s Felis_nigripes.FelNig_flattened_line_8080                 21770  6 +     52776 AT-----------C-T-T-T---------------------------
i Felis_nigripes.FelNig_flattened_line_8080             C 0 I 9
s Galeopterus_variegatus.GalVar_scaffold_354               156874  7 +    324696 AT-----------C-T-C-TT--------------------------
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    181834  5 -    189561 AT-----------C-T-C-----------------------------
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           14331  7 -     18683 AT-----------G-T-G-TT--------------------------
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               5940  7 -     14630 AC-----------C-T-C-TT--------------------------
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119653040  7 - 195582420 AC-----------C-T-C-TT--------------------------
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              17793  6 +     53719 AT-----------C-T-T-T---------------------------
i Helogale_parvula.HelPar_flattened_line_22962          C 0 I 1
s Hemitragus_hylocrius.HemHyl_scaffold_16669                28049  5 -     91191 AT-----------C-T-C-----------------------------
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2551665  7 +  31725842 at-----------c-t-c-TT--------------------------
i Heterocephalus_glaber.JH602058.1                      C 0 I 7
s Hippopotamus_amphibius.HipAmp_scaffold_1308              147692  5 +    277961 AT-----------C-T-C-----------------------------
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      278970  6 -    477199 AT-----------C-T-C-T---------------------------
i Hipposideros_armiger.JXIK01001085.1                   C 0 I 1
s Hipposideros_galeritus.HipGal_scaffold_104691              8120  6 -      9143 AT-----------T-T-C-T---------------------------
i Hipposideros_galeritus.HipGal_scaffold_104691         C 0 I 1
s Hoolock_leuconedys.ctg79                                      5627  7 -   7690867 AC-----------C-T-C-TT--------------------------
i Hoolock_leuconedys.ctg79                                 C 0 I 36
s Hyaena_hyaena.HyaHya_flattened_line_20729                 17870  6 -     67322 AT-----------C-T-T-T---------------------------
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 I 1
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19567  7 -    119109 AT-----------C-T-C-TT--------------------------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 I 7
s Hylobates_abbotti.k141_164775                               415  7 -      2073 AC-----------C-T-C-TT--------------------------
i Hylobates_abbotti.k141_164775                         C 0 C 0
s Hylobates_agilis.k141_1878600                               668  7 -      1230 AC-----------C-T-C-TT--------------------------
i Hylobates_agilis.k141_1878600                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14625321  7 -  25970782 AC-----------C-T-C-TT--------------------------
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            2577  7 -      2977 AC-----------C-T-C-TT--------------------------
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             34480  7 -     60944 AC-----------C-T-C-TT--------------------------
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     6731  7 +     22540 AT-----------C-T-C-TT--------------------------
i Hystrix_cristata.HysCri_scaffold_50788                C 0 I 7
s Ictidomys_tridecemlineatus.JH393315.1                   7126427  7 +  13083262 AT-----------C-T-C-TT--------------------------
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               9592  5 +     17520 AA-----------C-T-C-----------------------------
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8566507  7 +  11848649 GT-----------G-G-C-TC--------------------------
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               24199  5 +     37189 AT-----------C-T-C-----------------------------
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          50831  7 -    147782 AT-----------C-T-C-TT--------------------------
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    4354  3 +     26176 -------------C-T-T-----------------------------
i Lasiurus_borealis.LasBor_scaffold_59542               I 3430 C 0
s Leptonychotes_weddellii.KB714749.1                      3086556  6 -   3498232 AT-----------C-T-T-T---------------------------
i Leptonychotes_weddellii.KB714749.1                    C 0 I 1
s Lepus_americanus.LepAme_scaffold_62849                    13847  7 +     22452 GT-----------C-T-C-TT--------------------------
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            136549  5 +   3060487 AT-----------C-T-C-----------------------------
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19248977  7 +  19376315 AC-----------C-T-C-TT--------------------------
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loxodonta_africana.GL010040.1                          20595384  7 -  62548349 AT-----------C-T-C-TT--------------------------
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11088694  6 +  39895028 AT-----------C-T-T-T---------------------------
i Lycaon_pictus.CM007556.1                              C 0 I 1
s Macaca_arctoides.k141_2201161                             20712  7 +     74745 AC-----------C-T-C-TT--------------------------
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12707169  7 +  12821369 AC-----------C-T-C-TT--------------------------
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                2811  7 -      3136 AC-----------C-T-C-TT--------------------------
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           47626  7 +     63263 AC-----------C-T-C-TT--------------------------
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                 2334  7 -      2568 AC-----------C-T-C-TT--------------------------
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 2919  7 -      7381 AC-----------C-T-C-TT--------------------------
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  46136  7 -     79256 AC-----------C-T-C-TT--------------------------
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196036243  7 + 196197964 AC-----------C-T-C-TT--------------------------
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11446413  7 +  11645122 AC-----------C-T-C-TT--------------------------
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   5083  7 -     46448 AC-----------C-T-C-TT--------------------------
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                2757  7 -     13212 AC-----------C-T-C-TT--------------------------
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 16436  7 -     55006 AC-----------C-T-C-TT--------------------------
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43841552  7 +  43892939 AC-----------C-T-C-TT--------------------------
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               17722  7 -     24607 AC-----------C-T-C-TT--------------------------
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               5088  7 -     27140 AC-----------C-T-C-TT--------------------------
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43438137  7 -  43563597 AC-----------C-T-C-TT--------------------------
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4450957  7 -   4543643 AC-----------C-T-C-TT--------------------------
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            146640  6 +    252755 AT-----------C-T-C-T---------------------------
i Manis_javanica.JSZB01003966.1                         C 0 I 1
s Manis_pentadactyla.KN017078.1                             36783  6 +     58827 aT-----------C-T-C-T---------------------------
i Manis_pentadactyla.KN017078.1                         C 0 I 1
s Marmota_marmota.CZRN01000005.1                         36874246  7 +  64221397 AT-----------C-T-C-TT--------------------------
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             1582  6 -     87323 AT-----------C-T-T-T---------------------------
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 I 1
s Meriones_unguiculatus.MerUng_scaffold_52233               13766  7 +     15977 at-----------g-t-c-at--------------------------
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1047466  7 -  26018355 GT-----------G-T-C-AT--------------------------
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_227248                    876  5 -      1377 AT-----------C-T-C-----------------------------
i Mesoplodon_bidens.MesBid_scaffold_227248              C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  35495  7 -     48017 AT-----------C-A-T-GT--------------------------
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               23484  5 -     32043 AT-----------C-T-C-----------------------------
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8210655  7 +  10048721 atCT---------C-T-T-----------------------------
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            35144  7 +     45743 ACCT---------C-T-T-----------------------------
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         2686  7 +     29742 AC-----------C-T-C-TT--------------------------
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        12072  6 -    104932 AT-----------C-T-T-T---------------------------
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 I 1
s Monodon_monoceros.MonMon_M_scaffold_5598                 146977  5 +    154973 AT-----------A-T-C-----------------------------
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                162008  5 +    265003 AT-----------C-T-C-----------------------------
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  2064  5 -     19904 AT-----------C-T-C-----------------------------
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  145488  6 -    168139 AT-----------C-T-T-T---------------------------
i Mungos_mungo.MunMun_flattened_line_8729               C 0 I 1
s Murina_feae.MurFea_scaffold_2254                          22008  3 -    100666 -------------C-T-T-----------------------------
i Murina_feae.MurFea_scaffold_2254                      I 1911 C 0
s Mus_caroli.LT608236.1                                  70767300  7 +  92629107 at-----------t-a-c-at--------------------------
i Mus_caroli.LT608236.1                                 C 0 I 11
s Mus_musculus.chr16                                     75490376  7 +  98207768 at-----------t-a-c-at--------------------------
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67556579  7 +  89017189 at-----------t-a-c-at--------------------------
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74333111  7 +  97876770 at-----------t-a-c-at--------------------------
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             12836  7 +     98495 AT-----------C-T-T-AT--------------------------
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4424950  6 -  28371801 CT-----------C-T-T-T---------------------------
i Mustela_putorius.JH417978.1                           C 0 I 1
s Myocastor_coypus.MyoCoy_scaffold_3653                     90974  5 -    117718 AT-----------C-T-T-----------------------------
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 289 I 7
s Myotis_brandtii.KE161952.1                               969626  3 +   8389877 -------------c-t-t-----------------------------
i Myotis_brandtii.KE161952.1                            I 997 C 0
s Myotis_davidii.KB114863.1                               5021050  3 +   6462685 -------------c-t-t-----------------------------
i Myotis_davidii.KB114863.1                             I 746 C 0
s Myotis_lucifugus.GL429887.1                             3467128  3 -   3747815 -------------c-t-t-----------------------------
i Myotis_lucifugus.GL429887.1                           I 915 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        12371  3 +     66751 -------------C-T-T-----------------------------
i Myotis_myotis.MyoMyo_scaffold_6123                    I 948 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             5595  7 -      8794 AT-----------C-T-T-TT--------------------------
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nasalis_larvatus.k141_153429                               9193  7 +     48152 AC-----------C-T-C-TT--------------------------
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4485462  6 -  14209539 AT-----------C-T-T-T---------------------------
i Neomonachus_schauinslandi.NINY01007774.1              C 0 I 1
s Neophocaena_asiaeorientalis.KZ688543.1                  3951589  5 -   4490290 AT-----------A-T-C-----------------------------
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Nomascus_annamensis.k141_720788                             575  7 -      1065 AC-----------C-T-C-TT--------------------------
i Nomascus_annamensis.k141_720788                       C 0 C 0
s Nomascus_concolor.k141_226614                              1879  7 -      5092 AC-----------C-T-C-TT--------------------------
i Nomascus_concolor.k141_226614                         I 126 I 62
s Nomascus_gabriellae.k141_1004198                            446  7 +      1448 AC-----------C-T-C-TT--------------------------
i Nomascus_gabriellae.k141_1004198                      C 0 C 0
s Nomascus_siki_b.tarseq_80                             25597  7 -  18771707 AC-----------C-T-C-TT--------------------------
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  3300  7 +      4512 AC-----------C-T-C-TT--------------------------
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                31495  6 +   3668941 AT-----------C-T-T-T---------------------------
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 I 1
s Ochotona_princeps.JH802095.1                            4996604  7 -  23139505 TT-----------C-T-A-TT--------------------------
i Ochotona_princeps.JH802095.1                          C 0 I 7
s Octodon_degus.JH651621.1                                3686470  3 +  10294119 -----------------c-tc--------------------------
i Octodon_degus.JH651621.1                              I 2 I 7
s Odobenus_rosmarus.KB229369.1                             680129  6 -   3126709 AT-----------C-T-T-T---------------------------
i Odobenus_rosmarus.KB229369.1                          C 0 I 1
s Odocoileus_virginianus.KZ101650.1                       1080244  5 +   1425656 AT-----------C-T-C-----------------------------
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         37562  5 +     78940 AT-----------C-T-C-----------------------------
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  37657  7 +     62360 AT-----------G-T-C-AT--------------------------
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7225274  5 -   7562323 AT-----------A-T-C-----------------------------
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              60516  7 -     66828 AT-----------T-T-A-TT--------------------------
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141876884  7 + 163896628 AT-----------C-T-C-TT--------------------------
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      308779  6 -    505867 AT-----------C-T-T-T---------------------------
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 I 1
s Ovis_aries.CM001582.2                                 134077840  5 - 275406953 AT-----------C-T-C-----------------------------
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      79055  5 +    140051 AT-----------C-T-C-----------------------------
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.AJFE02002857.1                                 991 31 -      1091 AC-----------C-T-C-TTTGagatcctttatttttttct-tgt-
i Pan_paniscus.AJFE02002857.1                           I 17 n 1
s Pan_troglodytes.KZ622857.1                               328158 30 +    772158 AC-----------C-T-C-TTTGagatccttatttt-tttct-tgt-
i Pan_troglodytes.KZ622857.1                            I 17 I 4229
s Panthera_onca.PanOnc_flattened_line_1615                  34912  6 +    295523 at-----------C-T-T-T---------------------------
i Panthera_onca.PanOnc_flattened_line_1615              C 0 I 1
s Panthera_pardus.KV860323.1                              3638662  6 +  18214204 at-----------c-t-t-t---------------------------
i Panthera_pardus.KV860323.1                            C 0 I 1
s Panthera_tigris.KE721879.1                              5028337  6 -   6340057 at-----------c-t-t-t---------------------------
i Panthera_tigris.KE721879.1                            C 0 I 1
s Pantholops_hodgsonii.KE114631.1                         1066690  5 -   1292953 AT-----------C-T-C-----------------------------
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188156924  7 - 188283584 AC-----------C-T-C-TT--------------------------
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             5241  7 +      5367 AC-----------C-T-C-TT--------------------------
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47514309  7 +  47705337 AC-----------C-T-C-TT--------------------------
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 68285  7 -    104429 AC-----------C-T-C-TT--------------------------
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    6821  7 +     14967 AC-----------C-T-C-TT--------------------------
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 2680  7 -      7628 AC-----------C-T-C-TT--------------------------
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    116375  6 -    135482 AT-----------A-T-T-T---------------------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 I 1
s Perognathus_longimembris.PerPac_flattened_line_19359        617  7 +     49596 AT-----------A-T-C-TT--------------------------
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4950904  7 -   8017169 AC-----------G-T-C-AT--------------------------
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    14197  7 -     36578 AT-----------C-C-C-CT--------------------------
i Petromus_typicus.PetTyp_scaffold_33007                C 0 I 7
s Phocoena_phocoena.PhoPho_flattened_line_11948            121878  5 -    122454 AT-----------A-T-C-----------------------------
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1987485                           2707  7 -      5908 AC-----------C-T-C-TT--------------------------
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       3331  7 -     17985 AT-----------C-T-C-TT--------------------------
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            2698  7 +      7694 AT-----------C-T-C-TT--------------------------
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26741176  7 +  26888534 ac-----------C-T-C-TT--------------------------
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pithecia_albicans.k141_991845                             44437  7 -     61926 AT-----------C-C-C-TT--------------------------
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        25822  7 +     78826 AT-----------C-C-C-TT--------------------------
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              9869  7 -     15800 AT-----------C-C-C-TT--------------------------
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        13068  7 -     16101 AT-----------C-C-C-TT--------------------------
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          6296  7 +      9673 AT-----------C-C-C-TT--------------------------
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13475296  7 -  19735023 AT-----------C-C-C-TT--------------------------
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           14199  7 -     31692 AT-----------C-C-C-TT--------------------------
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           5965  5 +     21690 AT-----------C-T-C-----------------------------
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       23539  7 +     44506 AT-----------C-C-C-TT--------------------------
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        23751  7 +     67491 AT-----------C-C-C-TT--------------------------
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      13991  7 -     98129 AT-----------C-C-C-TT--------------------------
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     23591  7 +    147771 AT-----------C-C-C-TT--------------------------
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                          227  7 -     43940 AT-----------C-C-C-TT--------------------------
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          4310  7 -     55515 AT-----------C-C-C-TT--------------------------
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         23664  7 +    152463 AT-----------C-C-C-TT--------------------------
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       1381  7 -    119457 AT-----------C-C-C-TT--------------------------
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         13387  7 +    134592 AT-----------C-C-C-TT--------------------------
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          23974  7 -     75465 AT-----------C-C-C-TT--------------------------
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              187826  7 -    373494 AC-----------C-T-C-TT--------------------------
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19808474  7 +  19899266 AC-----------C-T-C-TT--------------------------
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               6437  7 -     15069 AC-----------C-T-C-TT--------------------------
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              6567  7 +     14865 AC-----------C-T-C-TT--------------------------
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Psammomys_obesus.NESX01026517.1                           36048  7 +     77221 at-----------g-t-c-at--------------------------
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            4647  5 -     27784 AT-----------C-T-C-----------------------------
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        247261  6 -    344369 AT-----------C-T-T-T---------------------------
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 I 1
s Pteropus_alecto.KB031157.1                             13246559  6 -  17261082 AT-----------C-C-C-T---------------------------
i Pteropus_alecto.KB031157.1                            C 0 I 10
s Pteropus_vampyrus.KN525959.1                             604510  6 -   3946241 AT-----------C-C-C-T---------------------------
i Pteropus_vampyrus.KN525959.1                          C 0 I 10
s Puma_concolor.QAVW01000427.1                          131534934  6 - 161321710 at-----------c-t-t-t---------------------------
i Puma_concolor.QAVW01000427.1                          C 0 I 9
s Pygathrix_cinerea.k141_374971                             30558  7 +     56732 AC-----------C-T-C-TT--------------------------
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6807046  7 +   6970761 AC-----------C-T-C-TT--------------------------
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             6437  7 +     18040 AC-----------C-T-C-TT--------------------------
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                16358  5 +     68503 AT-----------C-T-C-----------------------------
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1788422  6 +   2252614 AT-----------g-t-c-t---------------------------
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 I 1
s Rhinopithecus_bieti.k119_554384                             847  7 -     17045 AC-----------C-T-C-TT--------------------------
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206378324  7 - 206558726 aC-----------C-T-C-TT--------------------------
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44857238  7 -  45163003 AC-----------C-T-C-TT--------------------------
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                19890  6 +    109198 AT-----------C-C-C-T---------------------------
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 I 1
s Saiga_tatarica.SaiTat_scaffold_82192                       8515  5 +     12214 AT-----------C-T-C-----------------------------
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15673396  7 -  43202129 AT-----------C-T-C-TT--------------------------
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        5309  7 +     34089 AT-----------C-T-C-TT--------------------------
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              5251  7 -     60842 AT-----------C-T-C-TT--------------------------
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              5344  7 +     67014 AT-----------C-T-C-TT--------------------------
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              5322  7 +     60816 AT-----------C-T-C-TT--------------------------
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 5259  7 -     76454 AT-----------C-T-C-TT--------------------------
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17341986  7 -  30362882 AT-----------C-T-C-TT--------------------------
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         21347  7 -     62485 AT-----------C-T-C-TT--------------------------
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   32847  7 -    114521 AT-----------C-T-ATT---------------------------
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        4050  7 +     15331 AC-----------C-T-C-TT--------------------------
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       9443  7 +     20762 AC-----------C-T-C-TT--------------------------
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         119446  7 +    130994 AC-----------C-T-C-TT--------------------------
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           38232  7 +     46263 AC-----------C-T-C-TT--------------------------
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     31352  7 +     42640 AC-----------C-T-C-TT--------------------------
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        14392  7 +     30600 AC-----------C-T-C-TT--------------------------
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  100840  7 -    120886 AT-----------G-T-C-AT--------------------------
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            19453  6 +    739146 GT-----------T-T-C-T---------------------------
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17767028  7 -  27805282 AT-----------T-TGT-T---------------------------
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2240343  7 +   2842873 AT-----------C-T-C-TC--------------------------
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             235385  6 -    276980 AT-----------C-T-T-T---------------------------
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 I 1
s Suricata_suricatta.SurSur_flattened_line_20339            28148  6 +     62062 AT-----------C-T-T-T---------------------------
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 I 1
s Sus_scrofa.CM000824.4                                 189272668  5 + 218635234 AT-----------C-T-C-----------------------------
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        15582  7 -  13920577 AC-----------C-T-C-TT--------------------------
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                 836 16 +     20549 ATATATATATAATC-T-T-----------------------------
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               15261  7 +     45698 AT-----------C-T-T-TT--------------------------
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      807695  6 +   1148477 AT-----------C-T-C-T---------------------------
i Tapirus_indicus.TapInd_scaffold_176                   C 0 I 1
s Tapirus_terrestris.TapTer_scaffold_14939                  58407  6 +     99546 AT-----------C-T-C-T---------------------------
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 I 1
s Tarsius_lariang.k141_609102                               27059  7 +     42269 AT-----------T-T-C-TT--------------------------
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               60375  7 +     65473 AT-----------T-T-C-TT--------------------------
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194008446  7 - 194193292 AC-----------C-T-C-TT--------------------------
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             39407  7 -     47444 AA-----------T-T-C-TT--------------------------
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 I 7
s Tolypeutes_matacus.TolMat_scaffold_269431                  6068  4 +      6782 AT-----------C-T-------------------------------
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 I 1
s Tonatia_saurophila.TonSau_scaffold_3334                  136641  3 -    259118 AT-----------C---------------------------------
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 I 6
s Trachypithecus_auratus.k141_738098                        27548  7 +     38948 AC-----------C-T-C-TT--------------------------
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   21280  7 -     32910 AC-----------C-T-C-TT--------------------------
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      2666  7 -     12939 AC-----------C-T-C-TT--------------------------
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       2602  7 -     14244 AC-----------C-T-C-TT--------------------------
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           44001  7 -     54611 AC-----------C-T-C-TT--------------------------
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        1804  7 -     11566 AC-----------C-T-C-TT--------------------------
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     3981  7 -     15592 AC-----------C-T-C-TT--------------------------
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          2637  7 +     14371 AC-----------C-T-C-TT--------------------------
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                    918  7 +     12481 AC-----------C-T-C-TT--------------------------
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                         794  7 -     24393 AC-----------C-T-C-TT--------------------------
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       6040  7 -     28054 AC-----------C-T-C-TT--------------------------
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44660840  7 -  44834318 AC-----------C-T-C-TT--------------------------
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       3148  7 +     13828 AC-----------C-T-C-TT--------------------------
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   5719  5 +     90398 AT-----------C-T-C-----------------------------
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16085906  7 +  31416278 AT-----------C-T-C-TT--------------------------
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2793687  7 -   3938065 gt-----------c-t-G-TT--------------------------
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    5873  7 +     13056 GT-----------C-T-G-TT--------------------------
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69313990  5 -  96451834 AT-----------A-T-C-----------------------------
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   1890  5 +     10241 AT-----------C-A-C-----------------------------
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6515386  6 +  28682327 AT-----------C-T-T-T---------------------------
i Ursus_maritimus.KK498671.1                            C 0 I 8
s Vicugna_pacos.KN269600.1                                1525238  5 -   2331223 tt-----------c-t-t-----------------------------
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                138875  6 -    281493 AT-----------C-T-T-T---------------------------
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 I 1
s Xerus_inauris.XerIna_scaffold_7898                       127458  7 -    134049 AT-----------C-A-C-TT--------------------------
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        214856  6 -    227762 AT-----------C-T-T-T---------------------------
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 I 1
s Zapus_hudsonius.ZapHud_scaffold_64392                     16403  7 -     20485 GT-----------A-G-C-TC--------------------------
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           7489  5 -      8775 AT-----------C-T-C-----------------------------
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                701732 90 +    802869 I
e Procavia_capensis.ProCapCap_scaffold_149274                2467 1156 -      9567 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Megaderma_lyra.MegLyr_scaffold_3562                       64783 239 -    234502 I
e Heterohyrax_brucei.HetBruBak_scaffold_25354               61360 1157 +     73687 I
e Elephantulus_edwardii.JH947210.1                        7816992 12417 +  15467074 I
e Crocidura_indochinensis.CroInd_scaffold_848148              199  0 +      1327 C
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1008 325 -      5782 I
e Hylobates_klossii.k141_285563                               343 193 +      1026 I
e Microtus_ochrogaster.CM001673.1                        22820341  4 -  98408828 I
e Varecia_variegata.k141_775891                             25501  3 -     33872 I
e Varecia_rubra.k141_432109                                  5966  3 -     20643 I
e Rattus_norvegicus.chr11                                13915860 1475 +  90463843 I
e Propithecus_verreauxi.k141_158021                         39953  3 -     48185 I
e Propithecus_tattersalli.k141_907138                       17689  3 -     53241 I
e Propithecus_perrieri.k141_7554                            18055  3 +     27322 I
e Propithecus_edwardsi.k141_1317105                         36132  3 -     44753 I
e Propithecus_diadema.k141_577245                           43745  3 +     52369 I
e Propithecus_coronatus.k141_1353159                         4402  3 +     11805 I
e Propithecus_coquerelli.NW_012147863.1                     19492  3 -     30946 I
e Prolemur_simus.MPIZ01000048.1                           6849325  3 +  12164890 I
e Perodicticus_potto.k141_713187                            25474  3 -     27972 I
e Perodicticus_ibeanus.k141_117958                           6160  3 -     23713 I
e Otolemur_garnettii.GL873528.1                          18009456  3 -  38779656 I
e Otolemur_crassicaudatus.k141_505435                        1475  3 -     53940 I
e Ondatra_zibethicus.OndZib_scaffold_6821                  125594  4 +    145789 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65670190  0 +  89412551 C
e Nycticebus_coucang.k141_2051882                            4581  0 +      6470 C
e Nycticebus_bengalensis.LG16                            65567855  0 -  95554990 C
e Nannospalax_galili.KL201303.1                            119159  6 +    362372 I
e Mirza_zaza.k141_226143                                     6369  3 +      8497 I
e Microcebus_murinus.CM007691.1                          16510980  3 +  47401472 I
e Loris_tardigradus.ctg97                                 3779150  0 +   6799190 C
e Loris_lydekkerianus.k141_550999                           11401  0 +     84689 C
e Lepilemur_septentrionalis.k141_578524                     32347  3 -     33031 I
e Lepilemur_ruficaudatus.k141_617879                        79356  3 +    116806 I
e Lepilemur_dorsalis.k141_134267                            54094  3 +     63517 I
e Lepilemur_ankaranensis.k141_884009                        24708  3 +     39228 I
e Lemur_catta.scaffold_1                                258407958  3 - 285822530 I
e Indri_indri.k141_5141390                                   1122  3 -      3181 I
e Hapalemur_occidentalis.k141_797938                        46279  3 -     54384 I
e Hapalemur_meridionalis.k141_186231                        29651  3 -     42470 I
e Hapalemur_griseus.k141_1387522                             6402  3 +     56096 I
e Hapalemur_gilberti.k141_279011                             1076  3 -     11661 I
e Hapalemur_alaotrensis.k141_1280836                         2596  3 +     10286 I
e Graphiurus_murinus.GraMur_scaffold_4493                   77863  0 +    118900 C
e Galagoides_demidoff.k141_1769638                          11100  3 +     27357 I
e Galago_senegalensis.k141_964197                           14034  3 -     43889 I
e Galago_moholi.ctg555                                     211660  3 -    847004 I
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I
e Eulemur_sanfordi.k141_186399                              16595  3 -     29447 I
e Eulemur_rufus.k141_1620292                                33869  3 +     46535 I
e Eulemur_rubriventer.k141_411740                           19131  3 +     26808 I
e Eulemur_mongoz.k141_825972                                16675  3 +     27497 I
e Eulemur_fulvus.k141_653297                                12015  3 +    109717 I
e Eulemur_flavifrons.k141_903901                             8537  3 +     60246 I
e Eulemur_coronatus.k141_3240342                            12216  3 +     36558 I
e Eulemur_collaris.k141_311830                               5742  3 -      6809 I
e Eulemur_albifrons.k141_715837                              5810  3 +     13586 I
e Ellobius_talpinus.LOJH01090055.1                           7151  4 -      7838 I
e Ellobius_lutescens.LOEQ01003611.1                        240029  1 -    369425 I
e Daubentonia_madagascariensis.ctg11                     16845635  3 +  31942871 I
e Cheirogaleus_medius.k141_133808                            8812  3 +     13308 I
e Cheirogaleus_major.k141_1157592                           59764  3 -     68416 I
e Avahi_peyrierasi.k141_798820                               1105  3 +      6337 I
e Avahi_laniger.k141_2840928                                 7489  3 -     16375 I
e Arctocebus_calabarensis.k141_587554                        1753  3 +      9265 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               12453 368 +    209709 gt--gtgtgtgtgg------------acatatgttttcatttctttttt-aaattattattattatactttaagttttagggtacatgtgcacaacgtgcaggttcgttacatatgtatacatgtgccatgttggtgtgctgcacccattaactcgtcattta-cattaggtgtatctcctaatgctatccctcccccctccccccaccccacaacagttcccagtgtgtgatgttccccttcctgtgtccatgtgttctcattgttcaattcccacctatgagtgagaacatgtggtgtttggcttttcatccttgtgatagtttactgagaatgatggtttccagcttcatccatgtccctacaaaggacataaactcatca
s Pan_paniscus.AJFE02002911.1                                 666 361 +      1338 gtgtgtg------g------------acatatgttttcattc--ttttttaa-ttattattattatactttaagttatagggtacatgtgcacaacgtgcaggttcattacatatgtatacatgtgccatgttggtgtgctgcacccattaactcgtcattt-acattaggtatatctcctaatgctatctctcccccctccccca-ccccacaacagtccccagtgtgtgatgttcccctttctgtgtccatgtgttctcattgttcaattaccacctatgagtgagaacatgcggtgtttggcttttcgTCCTTGCgagagtttactgagaatgatggtttccagcttcatccatgtccctacaaaggacataaactcatca
i Pan_paniscus.AJFE02002911.1                           n 1 C 0
s Pan_troglodytes.NBAG03000771.1                           180501 370 +    210065 gtgtgtgtgtgtgg------------acatatgttttcatttctttttttaa-ttattattattatactttaagttatagggtacatgtgcacaacgtgcaggttcgttacatatgtatacatgtgccatgttggtgtgctgcacccattaactcgtcattt-acattaggtatatctcctaatgctatctctcccccctccccccaccccacaacagtccccagtgtgtgatgttccccttcctgtgtccatgtgttctcgttgttcaattcccacctatgagtgagaacgtgcggtgtttggcttttcgTCCTTGCgagagtttactgagaatgatggtttccagcttcatccatgtccctacaaaggacataaactcatca
i Pan_troglodytes.NBAG03000771.1                        I 1367 C 0
e Eptesicus_fuscus.JH977687.1                             4707522   0 +   6522550 C
e Macroglossus_sobrinus.MacSob_scaffold_879                701732  90 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             39414   7 -     47444 I
e Petromus_typicus.PetTyp_scaffold_33007                    14204   7 -     36578 I
e Sorex_araneus.JH798170.1                               17767035   0 -  27805282 C
e Dinomys_branickii.DinBra_scaffold_1996                   157576   7 +    228994 I
e Erinaceus_europaeus.JH835290.1                         11534833   0 +  16010500 C
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           3336   1 -      6963 I
e Aplodontia_rufa.AprRuf_scaffold_156013                     4248   0 +      5067 C
e Oryctolagus_cuniculus.CM000803.1                      141876891   0 + 163896628 C
e Ochotona_princeps.JH802095.1                            4996611   7 -  23139505 I
e Lepus_americanus.LepAme_scaffold_62849                    13854   0 +     22452 C
e Perognathus_longimembris.PerPac_flattened_line_19359        624   0 +     49596 C
e Dipodomys_stephensi.DipSte_scaffold_44365                 28586   0 +     28912 C
e Dipodomys_ordii.KN672545.1                              3656943   0 +   4240102 C
e Suricata_suricatta.SurSur_flattened_line_20339            28154   1 +     62062 I
e Nomascus_siki_a.k141_595747                                  3307   0 +      4512 C
e Ziphius_cavirostris.ZipCav_flattened_line_127025           7494   0 -      8775 C
e Zalophus_californianus.ZalCal_flattened_line_4097        214862   1 -    227762 I
e Vulpes_lagopus.VulLag_flattened_line_2045                138881   1 -    281493 I
e Vicugna_pacos.KN269600.1                                1525243   0 -   2331223 C
e Ursus_maritimus.KK498671.1                              6515392   8 +  28682327 I
e Uropsilus_gracilis.UroGra_scaffold_69449                   1895   0 +     10241 C
e Tursiops_truncatus.MRVK01000923.1                      69313995   0 -  96451834 C
e Trichechus_manatus.JH594618.1                          16085913   0 +  31416278 C
e Tragulus_javanicus.TraJav_scaffold_14717                   5724   0 +     90398 C
e Tonatia_saurophila.TonSau_scaffold_3334                  136644   6 -    259118 I
e Tolypeutes_matacus.TolMat_scaffold_269431                  6072   1 +      6782 I
e Tapirus_terrestris.TapTer_scaffold_14939                  58413   1 +     99546 I
e Tapirus_indicus.TapInd_scaffold_176                      807701   1 +   1148477 I
e Tamandua_tetradactyla.TamTet_scaffold_26877               15268   0 +     45698 C
e Tadarida_brasiliensis.TadBra_scaffold_61492                 852   0 +     20549 C
e Sus_scrofa.CM000824.4                                 189272673   0 + 218635234 C
e Spilogale_gracilis.SpiGra_flattened_line_905             235391   1 -    276980 I
e Solenodon_paradoxus.SolPar_flattened_line_1012            19459   0 +    739146 C
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   32854   0 -    114521 C
e Saiga_tatarica.SaiTat_scaffold_82192                       8520   0 +     12214 C
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                19896   1 +    109198 I
e Rhinolophus_sinicus.LVEH01000179.1                      1788428   1 +   2252614 I
e Rangifer_tarandus.RanTarSib_scaffold_24239                16363   0 +     68503 C
e Puma_concolor.QAVW01000427.1                          131534940   9 - 161321710 I
e Pteropus_vampyrus.KN525959.1                             604516  10 -   3946241 I
e Pteropus_alecto.KB031157.1                             13246565  10 -  17261082 I
e Pteronura_brasiliensis.PteBra_flattened_line_1343        247267   1 -    344369 I
e Pteronotus_parnellii.KE867983.1                            4652   0 -     27784 C
e Procavia_capensis.ProCapCap_scaffold_149274                2467 1156 -      9567 I
e Platanista_gangetica.PlaMin_flattened_line_72990           5970   0 +     21690 C
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Phocoena_phocoena.PhoPho_flattened_line_11948            121883   0 -    122454 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    116381   1 -    135482 I
e Pantholops_hodgsonii.KE114631.1                         1066695   0 -   1292953 C
e Panthera_tigris.KE721879.1                              5028343   1 -   6340057 I
e Panthera_pardus.KV860323.1                              3638668   1 +  18214204 I
e Panthera_onca.PanOnc_flattened_line_1615                  34918   1 +    295523 I
e Ovis_canadensis.OviCan_scaffold_6251                      79060   0 +    140051 C
e Ovis_aries.CM001582.2                                 134077845   0 - 275406953 C
e Otocyon_megalotis.JAEUCK010005121.1                      308785   1 -    505867 I
e Orycteropus_afer.OryAfe_flattened_line_13509              60523   0 -     66828 C
e Orcinus_orca.KB316965.1                                 7225279   0 -   7562323 C
e Okapia_johnstoni.LVCL01S0017931.1                         37567   0 +     78940 C
e Odocoileus_virginianus.KZ101650.1                       1080249   0 +   1425656 C
e Odobenus_rosmarus.KB229369.1                             680135   1 -   3126709 I
e Nyctereutes_procyonoides.CAJHUB010000786.1                31501   1 +   3668941 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214  77 +     94413 I
e Neophocaena_asiaeorientalis.KZ688543.1                  3951594   0 -   4490290 C
e Neomonachus_schauinslandi.NINY01007774.1                4485468   1 -  14209539 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             5602   0 -      8794 C
e Myotis_myotis.MyoMyo_scaffold_6123                        12374   0 +     66751 C
e Myotis_lucifugus.GL429887.1                             3467131   0 -   3747815 C
e Myotis_davidii.KB114863.1                               5021053   0 +   6462685 C
e Myotis_brandtii.KE161952.1                               969629   0 +   8389877 C
e Mustela_putorius.JH417978.1                             4424956   1 -  28371801 I
e Murina_feae.MurFea_scaffold_2254                          22011   0 -    100666 C
e Mungos_mungo.MunMun_flattened_line_8729                  145494   1 -    168139 I
e Moschus_moschiferus.MosMos_scaffold_78805                  2069   0 -     19904 C
e Mormoops_blainvillei.MorMeg_scaffold_2952                162013   0 +    265003 C
e Monodon_monoceros.MonMon_M_scaffold_5598                 146982   0 +    154973 C
e Mirounga_angustirostris.MirAng_flattened_line_8852        12078   1 -    104932 I
e Miniopterus_schreibersii.MinSch_scaffold_24116            35151   0 +     45743 C
e Miniopterus_natalensis.LDJU01000022.1                   8210662   0 +  10048721 C
e Micronycteris_hirsuta.MicHir_scaffold_37978               23489   0 -     32043 C
e Microgale_talazaci.MicTal_scaffold_34660                  35502   0 -     48017 C
e Mesoplodon_bidens.MesBid_scaffold_227248                    881   0 -      1377 C
e Mellivora_capensis.MelCap_flattened_line_15433             1588   1 -     87323 I
e Megaderma_lyra.MegLyr_scaffold_3562                       64783 239 -    234502 I
e Manis_pentadactyla.KN017078.1                             36789   1 +     58827 I
e Manis_javanica.JSZB01003966.1                            146646   1 +    252755 I
e Lycaon_pictus.CM007556.1                               11088700   1 +  39895028 I
e Loxodonta_africana.GL010040.1                          20595391   0 -  62548349 C
e Lipotes_vexillifer.KE558548.1                            136554   0 +   3060487 C
e Leptonychotes_weddellii.KB714749.1                      3086562   1 -   3498232 I
e Lasiurus_borealis.LasBor_scaffold_59542                    4357   0 +     26176 C
e Kogia_breviceps.KogBre_flattened_line_35920               24204   0 +     37189 C
e Inia_geoffrensis.IniGeo_flattened_line_66725               9597   0 +     17520 C
e Hyaena_hyaena.HyaHya_flattened_line_20729                 17876   1 -     67322 I
e Hipposideros_galeritus.HipGal_scaffold_104691              8126   1 -      9143 I
e Hipposideros_armiger.JXIK01001085.1                      278976   1 -    477199 I
e Hippopotamus_amphibius.HipAmp_scaffold_1308              147697   0 +    277961 C
e Heterohyrax_brucei.HetBruBak_scaffold_25354               61360 1157 +     73687 I
e Hemitragus_hylocrius.HemHyl_scaffold_16669                28054   0 -     91191 C
e Helogale_parvula.HelPar_flattened_line_22962              17799   1 +     53719 I
e Giraffa_tippelskirchi.LVKQ01S012154.1                    181839   0 -    189561 C
e Felis_nigripes.FelNig_flattened_line_8080                 21776   9 +     52776 I
e Felis_catus_fca126.CM031420.1                         129280636   9 - 158578461 I
e Eubalaena_japonica.EubJap_flattened_line_7756             62061   0 +     89355 C
e Eschrichtius_robustus.EscRob_flattened_line_685          315608   0 +    330699 C
e Equus_przewalskii.ATBW01073585.1                          13549   1 +     92910 I
e Equus_caballus.CM000402.2                              13352060   1 +  41866177 I
e Equus_asinus.JREZ01000062.1                             5853555   1 -   7175178 I
e Enhydra_lutris.KZ291749.1                              85872776   1 +  99434291 I
e Elephantulus_edwardii.JH947210.1                        7816992 12417 +  15467074 I
e Elaphurus_davidianus.JRFZ01086400.1                     1492034   0 +   1727528 C
e Eidolon_helvum.KE772537.1                                 12831   1 +     24177 I
e Echinops_telfairi.JH980316.1                           22999510   0 -  44670279 C
e Diceros_bicornis.DicBicMic_scaffold_9545                   3767   1 +    151128 I
e Dicerorhinus_sumatrensis.PEKH010003161.1                 323115   1 +    993696 I
e Desmodus_rotundus.KZ672188.1                           18699583   0 -  18957592 C
e Delphinapterus_leucas.KZ290064.1                       80037392   0 -  96802777 C
e Dasypus_novemcinctus.JH568778.1                          184212   1 -   6883506 I
e Cryptoprocta_ferox.CryFer_flattened_line_19014            52601   1 -     70449 I
e Crocidura_indochinensis.CroInd_scaffold_848148              199   0 +      1327 C
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1008 325 -      5782 I
e Condylura_cristata.JH655880.1                          60614172   0 +  78930452 C
e Choloepus_hoffmanni.KN194586.1                           762343   0 +    964067 C
e Choloepus_didactylus.ChoDid_scaffold_36182                17038   0 -     21363 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_160623         4220   1 -      9338 I
e Catagonus_wagneri.CatWag_scaffold_1305                   159453   0 -    276539 C
e Carollia_perspicillata.CarPer_scaffold_4436               60300   0 +     67245 C
e Capra_hircus.CM004562.1                               135706997   0 - 157403528 C
e Capra_aegagrus.CM003214.1                              21325769   0 + 157394656 C
e Canis_lupus_orion.HG994411.1                           16456259   1 -  44759192 I
e Canis_lupus_familiaris.chr31                           11089244   1 +  39895921 I
e Canis_lupus_dingo.QKWQ01001993.1                       11266710   1 -  35597290 I
e Canis_lupus_VD.CanFam_VD_scaffold_16982                   15069   1 +     87036 I
e CanFam4.chr31                                          11520043   1 +  39901454 I
e Camelus_ferus.KB016973.1                                2973576   0 +   6889770 C
e Camelus_dromedarius.KN271192.1                           397840   0 -  15254737 C
e Camelus_bactrianus.KN276303.1                           3220139   0 -   8989139 C
e Bubalus_bubalis.KI419065.1                              1233348   0 -   1914593 C
e Bos_taurus.CM000177.6                                 136296268   0 - 158972876 C
e Bos_mutus.JH883513.1                                     573076   0 -    998990 C
e Bos_indicus.CM003021.1                                138140535   0 - 161108492 C
e Bison_bison.KN264915.1                                  6560420   0 +   6870073 C
e Beatragus_hunteri.BeaHun_scaffold_21644                   43804   0 -     72089 C
e Balaenoptera_bonaerensis.DF502048.1                        5940   0 -     13118 C
e Balaenoptera_acutorostrata.KI537095.1                  26380768   0 +  51448160 C
e Artibeus_jamaicensis.ArtJam_scaffold_41619                 9513   0 -     29036 C
e Antilocapra_americana.AntAmePen_scaffold_42841            31276   0 +     33004 C
e Anoura_caudifer.AnoCau_scaffold_422                      391097   0 -    631301 C
e Ammotragus_lervia.NIVO01013474.1                        3520694   0 +   4113121 C
e Ailurus_fulgens.LNAC01000003.1                          7095252   1 -  16596857 I
e Ailuropoda_melanoleuca.LNAT01000321.1                  10657900   1 +  23371972 I
e Acinonyx_jubatus.LLWD01000356.1                         2034585   9 +   3721120 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19574   7 -    119109 I
e Glis_glis.GliGli_scaffold_79770                           14338   0 -     18683 C
e Zapus_hudsonius.ZapHud_scaffold_64392                     16410   0 -     20485 C
e Jaculus_jaculus.JH725517.1                              8566514   0 +  11848649 C
e Hylobates_pileatus_a.tarseq_592                             34487   0 -     60944 C
e Hylobates_pileatus_b.ContigUN                                 14625328   0 -  25970782 C
e Allactaga_bullata.AllBul_scaffold_70162                   17500   0 -     22067 C
e Hylobates_muelleri.k141_1389047                            2584   0 -      2977 C
e Hylobates_klossii.k141_285563                               343 193 +      1026 I
e Hylobates_agilis.k141_1878600                               675   0 -      1230 C
e Hylobates_abbotti.k141_164775                               422   0 -      2073 C
e Galeopterus_variegatus.GalVar_scaffold_354               156881   0 +    324696 C
e Microtus_ochrogaster.CM001673.1                        22820341   4 -  98408828 I
e Xerus_inauris.XerIna_scaffold_7898                       127465   0 -    134049 C
e Varecia_variegata.k141_775891                             25501   3 -     33872 I
e Varecia_rubra.k141_432109                                  5966   3 -     20643 I
e Tupaia_tana.TupTan_flattened_line_68454                    5880   0 +     13056 C
e Tupaia_chinensis.KB320831.1                             2793694   0 -   3938065 C
e Trachypithecus_pileatus.k141_1022309                       3155   0 +     13828 C
e Trachypithecus_phayrei.ctg3                            44660847   0 -  44834318 C
e Trachypithecus_obscurus.k141_1115109                       6047   0 -     28054 C
e Trachypithecus_melamera.k141_699241                         801   0 -     24393 C
e Trachypithecus_leucocephalus.k141_381681                    925   0 +     12481 C
e Trachypithecus_laotum.k141_760702                          2644   0 +     14371 C
e Trachypithecus_hatinhensis.k141_504423                     3988   0 -     15592 C
e Trachypithecus_germaini.k141_868450                        1811   0 -     11566 C
e Trachypithecus_geei.k141_670367                           44008   0 -     54611 C
e Trachypithecus_francoisi.k141_768164                       2609   0 -     14244 C
e Trachypithecus_cristatus.k141_1011511                      2673   0 -     12939 C
e Trachypithecus_crepusculus.k141_1588528                   21287   0 -     32910 C
e Trachypithecus_auratus.k141_738098                        27555   0 +     38948 C
e Theropithecus_gelada.CM009951.1                       194008453   0 - 194193292 C
e Tarsius_wallacei.k141_48636                               60382   0 +     65473 C
e Tarsius_lariang.k141_609102                               27066   0 +     42269 C
e Spermophilus_dauricus.KZ294190.1                        2240350   0 +   2842873 C
e Sigmodon_hispidus.SigHis_scaffold_11332                  100847   0 -    120886 C
e Semnopithecus_vetulus.k141_1143185                        14399   0 +     30600 C
e Semnopithecus_schistaceus.k141_387461                     31359   0 +     42640 C
e Semnopithecus_priam.k141_410937                           38239   0 +     46263 C
e Semnopithecus_johnii.k141_785014                         119453   0 +    130994 C
e Semnopithecus_hypoleucos.k141_761524                       9450   0 +     20762 C
e Semnopithecus_entellus.k141_1572367                        4057   0 +     15331 C
e Sapajus_macrocephalus.k141_966464                         21354   0 -     62485 C
e Sapajus_apella.ctg10                                   17341993   0 -  30362882 C
e Saimiri_ustus.k141_1282476                                 5266   0 -     76454 C
e Saimiri_sciureus.k141_1947592                              5329   0 +     60816 C
e Saimiri_oerstedii.k141_841116                              5351   0 +     67014 C
e Saimiri_macrodon.k141_2087127                              5258   0 -     60842 C
e Saimiri_cassiquiarensis.k141_808270                        5316   0 +     34089 C
e Saimiri_boliviensis.NW_024100938.1                     15673403   0 -  43202129 C
e Rhinopithecus_strykeri.ctg4                            44857245   0 -  45163003 C
e Rhinopithecus_roxellana.NC_044549.1                   206378331   0 - 206558726 C
e Rhinopithecus_bieti.k119_554384                             854   0 -     17045 C
e Rattus_norvegicus.chr11                                13915860 1475 +  90463843 I
e Pygathrix_nigripes_a.k141_101123                             6444   0 +     18040 C
e Pygathrix_nigripes_b.ctg79                                 6807053   0 +   6970761 C
e Pygathrix_cinerea.k141_374971                             30565   0 +     56732 C
e Psammomys_obesus.NESX01026517.1                           36055   0 +     77221 C
e Propithecus_verreauxi.k141_158021                         39953   3 -     48185 I
e Propithecus_tattersalli.k141_907138                       17689   3 -     53241 I
e Propithecus_perrieri.k141_7554                            18055   3 +     27322 I
e Propithecus_edwardsi.k141_1317105                         36132   3 -     44753 I
e Propithecus_diadema.k141_577245                           43745   3 +     52369 I
e Propithecus_coronatus.k141_1353159                         4402   3 +     11805 I
e Propithecus_coquerelli.NW_012147863.1                     19492   3 -     30946 I
e Prolemur_simus.MPIZ01000048.1                           6849325   3 +  12164890 I
e Presbytis_mitrata.k141_860013                              6574   0 +     14865 C
e Presbytis_comata.k141_672698                               6444   0 -     15069 C
e Plecturocebus_moloch.k141_890597                          23981   0 -     75465 C
e Plecturocebus_miltoni.k141_841561                         13394   0 +    134592 C
e Plecturocebus_hoffmannsi.k141_985533                       1388   0 -    119457 C
e Plecturocebus_grovesi.k141_242819                         23671   0 +    152463 C
e Plecturocebus_dubius.k141_3565563                          4317   0 -     55515 C
e Plecturocebus_cupreus.k141_1145860                          234   0 -     43940 C
e Plecturocebus_cinerascens.k141_744510                     23598   0 +    147771 C
e Plecturocebus_caligatus.k141_2539816                      13998   0 -     98129 C
e Plecturocebus_brunneus.k141_498086                        23758   0 +     67491 C
e Plecturocebus_bernhardi.k141_959214                       23546   0 +     44506 C
e Pithecia_vanzolinii.k141_831006                           14206   0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13475303   0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          6303   0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        13075   0 -     16101 C
e Pithecia_hirsuta.k141_1152968                              9876   0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        25829   0 +     78826 C
e Pithecia_albicans.k141_991845                             44444   0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000036.1               26741183   0 +  26888534 C
e Piliocolobus_kirkii.k141_929665                            2705   0 +      7694 C
e Piliocolobus_gordonorum.k141_1270531                       3338   0 -     17985 C
e Piliocolobus_badius.k141_1987485                           2714   0 -      5908 C
e Peromyscus_maniculatus.KI615518.1                       4950911   0 -   8017169 C
e Perodicticus_potto.k141_713187                            25474   3 -     27972 I
e Perodicticus_ibeanus.k141_117958                           6160   3 -     23713 I
e Papio_ursinus.k141_1345919                                 2687   0 -      7628 C
e Papio_papio.k141_979496                                    6828   0 +     14967 C
e Papio_kindae.k141_5458022                                 68292   0 -    104429 C
e Papio_hamadryas.Contig15                               47514316   0 +  47705337 C
e Papio_cynocephalus.k141_883042                             5248   0 +      5367 C
e Papio_anubis.CM001492.2                               188156931   0 - 188283584 C
e Otolemur_garnettii.GL873528.1                          18009456   3 -  38779656 I
e Otolemur_crassicaudatus.k141_505435                        1475   3 -     53940 I
e Onychomys_torridus.OnyTor_scaffold_12578                  37664   0 +     62360 C
e Ondatra_zibethicus.OndZib_scaffold_6821                  125594   4 +    145789 I
e Octodon_degus.JH651621.1                                3686473   7 +  10294119 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65670190   0 +  89412551 C
e Nycticebus_coucang.k141_2051882                            4581   0 +      6470 C
e Nycticebus_bengalensis.LG16                            65567855   0 -  95554990 C
e Nasalis_larvatus.k141_153429                               9200   0 +     48152 C
e Nannospalax_galili.KL201303.1                            119159   6 +    362372 I
e Myocastor_coypus.MyoCoy_scaffold_3653                     90979   7 -    117718 I
e Muscardinus_avellanarius.MusAve_scaffold_9643             12843   0 +     98495 C
e Mus_spretus.CM004110.1                                 74333118   0 +  97876770 C
e Mus_pahari.LT608305.1                                  67556586   0 +  89017189 C
e Mus_musculus.chr16                                     75490383   0 +  98207768 C
e Mus_caroli.LT608236.1                                  70767307  11 +  92629107 I
e Mirza_zaza.k141_226143                                     6369   3 +      8497 I
e Miopithecus_ogouensis.k141_2935907                         2693   0 +     29742 C
e Microcebus_murinus.CM007691.1                          16510980   3 +  47401472 I
e Mesocricetus_auratus.KB708139.1                         1047473   0 -  26018355 C
e Meriones_unguiculatus.MerUng_scaffold_52233               13773   0 +     15977 C
e Marmota_marmota.CZRN01000005.1                         36874253   0 +  64221397 C
e Mandrillus_sphinx.Contig144                             4450964   0 -   4543643 C
e Mandrillus_leucophaeus.scaffold125                     43438144   0 -  43563597 C
e Macaca_tonkeana.k141_2870633                               5095   0 -     27140 C
e Macaca_thibetana.k99_662710                               17729   0 -     24607 C
e Macaca_silenus.Contig12                                43841559   0 +  43892939 C
e Macaca_siberu.k141_741907                                 16443   0 -     55006 C
e Macaca_radiata.k141_3680256                                2764   0 -     13212 C
e Macaca_nigra.k141_282495                                   5090   0 -     46448 C
e Macaca_nemestrina.KQ004885.1                           11446420   0 +  11645122 C
e Macaca_mulatta.NC_041755.1                            196036250   0 + 196197964 C
e Macaca_maura.k141_251854                                  46143   0 -     79256 C
e Macaca_leonina.k141_467472                                 2926   0 -      7381 C
e Macaca_fuscata.k119_599327                                 2341   0 -      2568 C
e Macaca_fascicularis.k141_155037                           47633   0 +     63263 C
e Macaca_cyclopis.k119_893486                                2818   0 -      3136 C
e Macaca_assamensis.Contig65                             12707176   0 +  12821369 C
e Macaca_arctoides.k141_2201161                             20719   0 +     74745 C
e Loris_tardigradus.ctg97                                 3779150   0 +   6799190 C
e Loris_lydekkerianus.k141_550999                           11401   0 +     84689 C
e Lophocebus_aterrimus.ctg55                             19248984   0 +  19376315 C
e Lepilemur_septentrionalis.k141_578524                     32347   3 -     33031 I
e Lepilemur_ruficaudatus.k141_617879                        79356   3 +    116806 I
e Lepilemur_dorsalis.k141_134267                            54094   3 +     63517 I
e Lepilemur_ankaranensis.k141_884009                        24708   3 +     39228 I
e Lemur_catta.scaffold_1                                258407958   3 - 285822530 I
e Lagothrix_lagothricha.k141_12968                          50838   0 -    147782 C
e Indri_indri.k141_5141390                                   1122   3 -      3181 I
e Ictidomys_tridecemlineatus.JH393315.1                   7126434   0 +  13083262 C
e Hystrix_cristata.HysCri_scaffold_50788                     6738   7 +     22540 I
e Heterocephalus_glaber.JH602058.1                        2551672   7 +  31725842 I
e Hapalemur_occidentalis.k141_797938                        46279   3 -     54384 I
e Hapalemur_meridionalis.k141_186231                        29651   3 -     42470 I
e Hapalemur_griseus.k141_1387522                             6402   3 +     56096 I
e Hapalemur_gilberti.k141_279011                             1076   3 -     11661 I
e Hapalemur_alaotrensis.k141_1280836                         2596   3 +     10286 I
e Graphiurus_murinus.GraMur_scaffold_4493                   77863   0 +    118900 C
e Galagoides_demidoff.k141_1769638                          11100   3 +     27357 I
e Galago_senegalensis.k141_964197                           14034   3 -     43889 I
e Galago_moholi.ctg555                                     211660   3 -    847004 I
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I
e Eulemur_sanfordi.k141_186399                              16595   3 -     29447 I
e Eulemur_rufus.k141_1620292                                33869   3 +     46535 I
e Eulemur_rubriventer.k141_411740                           19131   3 +     26808 I
e Eulemur_mongoz.k141_825972                                16675   3 +     27497 I
e Eulemur_fulvus.k141_653297                                12015   3 +    109717 I
e Eulemur_flavifrons.k141_903901                             8537   3 +     60246 I
e Eulemur_coronatus.k141_3240342                            12216   3 +     36558 I
e Eulemur_collaris.k141_311830                               5742   3 -      6809 I
e Eulemur_albifrons.k141_715837                              5810   3 +     13586 I
e Erythrocebus_patas.Contig8                             48776228   0 -  48907691 C
e Ellobius_talpinus.LOJH01090055.1                           7151   4 -      7838 I
e Ellobius_lutescens.LOEQ01003611.1                        240029   1 -    369425 I
e Dolichotis_patagonum.DolPat_scaffold_14102                36665   7 -     73477 I
e Daubentonia_madagascariensis.ctg11                     16845635   3 +  31942871 I
e Dasyprocta_punctata.DasPun_flattened_line_634             59439   7 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                18349   7 +     26546 I
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 31653   8 -     67205 I
e Ctenodactylus_gundi.CteGun_scaffold_447                  209008   0 -    956709 C
e Cricetulus_griseus.LT883672.1                          53029787   0 +  72327488 C
e Cricetomys_gambianus.CriGam_scaffold_949                 279115   0 -    399297 C
e Colobus_polykomos.k141_1406057                            17260   0 +     23629 C
e Colobus_guereza.LG08                                  147665275   0 + 156195979 C
e Colobus_angolensis.KN985967.1                          10887110   0 +  10971483 C
e Chlorocebus_sabaeus.CM001963.2                        101145346   0 + 101219884 C
e Chlorocebus_pygerythrus.k141_1486215                      34793   0 -     53260 C
e Chlorocebus_aethiops.ctg22                             15140178   0 -  15256731 C
e Chiropotes_sagulatus.k141_773804                          15987   0 +     40510 C
e Chiropotes_israelita.k141_1189915                         71807   0 +    196370 C
e Chinchilla_lanigera.JH721867.1                         15962308   7 +  43084221 I
e Cheracebus_torquatus.k141_315545                          47000   0 +     54541 C
e Cheracebus_regulus.k141_2128895                           42321   0 +     57117 C
e Cheracebus_lugens.k141_203936                             23281   0 +     25473 C
e Cheracebus_lucifer.k141_619653                             6263   0 -     18223 C
e Cheirogaleus_medius.k141_133808                            8812   3 +     13308 I
e Cheirogaleus_major.k141_1157592                           59764   3 -     68416 I
e Cercopithecus_roloway.k141_2263608                        22185   0 +     37128 C
e Cercopithecus_pogonias.k141_3109732                        2568   0 -     17744 C
e Cercopithecus_petaurista.k141_64532                        2590   0 -     25661 C
e Cercopithecus_nictitans.k141_1129315                       2815   0 +     35577 C
e Cercopithecus_neglectus.k141_2078027                      41809   0 -     45581 C
e Cercopithecus_mona.ctg12                               46478259   0 +  46592721 C
e Cercopithecus_albogularis.ctg51                              11991499   0 +  12117833 C
e Cercopithecus_lowei.k141_623764                           24973   0 +     35983 C
e Cercopithecus_hamlyni.k141_129805                          2814   0 +     16677 C
e Cercopithecus_diana.k141_2157192                             14   0 +     26591 C
e Cercopithecus_cephus.k141_598190                          30268   0 +     30494 C
e Cercopithecus_ascanius.k141_4123525                        2772   0 -     17608 C
e Cercocebus_torquatus.k141_3969582                         59882   0 -    107033 C
e Cercocebus_lunulatus.k141_4634644                          2573   0 -     21101 C
e Cercocebus_chrysogaster.k141_2328246                      27367   0 +     60454 C
e Cercocebus_atys.KQ010443.1                              6555890   0 +   6739814 C
e Cephalopachus_bancanus.k141_702587                         8638   0 +     21754 C
e Cebus_unicolor.k141_239009                                13235   0 +     25043 C
e Cebus_olivaceus.k141_93739                                 8992   0 -     26817 C
e Cebus_albifrons.Contig22                               18891448   0 -  29618158 C
e Cavia_tschudii.CavTsc_scaffold_488                       177346   7 +    436027 I
e Cavia_porcellus.DS562889.1                             15799155   7 -  24440124 I
e Cavia_aperea.AVPZ01000278.1                            15787219   7 -  24422027 I
e Castor_canadensis.CasCan_scaffold_47037                   31693   0 +     33760 C
e Carlito_syrichta.NW_007248099.1                          309614   0 +    345090 C
e Cacajao_melanocephalus.k141_1160263                        8221   0 -    134917 C
e Cacajao_hosomi.k141_303789                                15678   0 -    216513 C
e Cacajao_calvus.k141_96166                                 13635   0 +    125063 C
e Cacajao_ayresi.k141_724503                               114606   0 -    171031 C
e Avahi_peyrierasi.k141_798820                               1105   3 +      6337 I
e Avahi_laniger.k141_2840928                                 7489   3 -     16375 I
e Ateles_paniscus.k141_1631200                               6719   0 -     25888 C
e Ateles_marginatus.k141_899112                             64748   0 +    119057 C
e Ateles_geoffroyi_a.k141_1300742                             16756   0 -     58268 C
e Ateles_chamek.k141_1072810                                12253   0 +     89302 C
e Ateles_belzebuth.k141_1348307                             61240   0 +     85812 C
e Ateles_geoffroyi_b.tarseq_2582                             9539969   0 +  39197703 C
e Arctocebus_calabarensis.k141_587554                        1753   3 +      9265 I
e Aotus_vociferans.k141_718647                               6700   0 +     23246 C
e Aotus_trivirgatus.k141_1740727                             6698   0 -    104377 C
e Aotus_nancymaae.KZ196176.1                              5750109   0 +   9889416 C
e Aotus_griseimembra.k141_3275623                            6152   0 +     22701 C
e Aotus_azarae.k141_3170768                                 63210   0 +     78111 C
e Alouatta_seniculus.k141_1531728                             715   0 -      1692 C
e Alouatta_puruensis.k141_1284840                            4580   0 -      4927 C
e Alouatta_palliata.k141_2764429                              500   0 -      1480 C
e Alouatta_nigerrima.k141_3537692                             587   0 +      1660 C
e Alouatta_macconnelli.k141_2177643                           538   0 -      1868 C
e Alouatta_juara.k141_1244470                                1154   0 +      2129 C
e Alouatta_discolor.k141_811576                             11531   0 -     21359 C
e Alouatta_caraya.k141_1710068                                575   0 +      1555 C
e Alouatta_belzebul.k141_1818029                            10858   0 -     18050 C
e Allochrocebus_solatus.k141_371672                          2558   0 -     80423 C
e Allochrocebus_preussi.k141_1108977                         1599   0 +     38766 C
e Allochrocebus_lhoesti.k141_3566948                         2664   0 -     29318 C
e Allenopithecus_nigroviridis.k141_2469532                   1944   0 -     60446 C
e Acomys_cahirinus.AcoCah_scaffold_1625                    113328   0 -    189883 C
e Nomascus_siki_b.tarseq_80                             25604   0 -  18771707 C
e Nomascus_annamensis.k141_720788                             582   0 -      1065 C
e Symphalangus_syndactylus.tarseq_24                        15589   0 -  13920577 C
e Pongo_pygmaeus.ctg62                                   19808481   0 +  19899266 C
e Pongo_abelii.NDHI03003816.1                              187833   0 -    373494 C
e Nomascus_gabriellae.k141_1004198                            453   0 +      1448 C
e Nomascus_concolor.k141_226614                              1886  62 -      5092 I
e Hoolock_leuconedys.ctg79                                      5634  36 -   7690867 I
e Gorilla_gorilla.LT578340.1                            119653047   0 - 195582420 C
e Gorilla_beringei.k141_111300                               5947   0 -     14630 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               12821 419 +    209709 tttttatggctgcatagtattgcatgttgtatatgtgccacattttcttaatccagtctatcatcgttggacatttgggttggttccaagtctttgctattgtgaatagtgccacaataagcatatgtgtgcatgtgtctttagagcagcatgacttataatcctttgggtacatacccagtaatgggatggctgggtcaaacggtatttctagttctagatccctgaggaatcaccacaccgacttccacaatggttgaaatagttcacagtcccatcaacagtgtgaaagttttcctatttctccacatcctctccagcacctgttgtttcctgactttttaatgattgccattctaactggtgtgagatggtatctcattgtggttttgatttgcttttctctgatgggcagtgac
s Pan_paniscus.AJFE02002911.1                                1027 311 +      1338 tttttatggctgcatagtattccatggtgtatatgtgccacattttcttaatccagtctatcattgttggacatttgggttggttccaagtctttgctattgtgaatcgtgccacaataaacatatgtgtgcgtgtgtctttagagcagcatgatttataatcctttgggtacatacccagtaatgggatggctgggtcaaatgatatttctagttctagatccctgaggaatcaccacactgtcttccacaatggttgaactagtttacagtcccatcaacagtgtaaaagttttcctatttctccacat------------------------------------------------------------------------------------------------------------
i Pan_paniscus.AJFE02002911.1                           C 0 n 0
s Pan_troglodytes.NBAG03000771.1                           180871 419 +    210065 tttttatggctgcatagtattccatggtgtatatgtgccacattttcttaatccagtctatcatttttggacatttgggttggttccaagtctttgctattgtgaatagtgccacaataaacatatgtgtgcatgtgtctttagagcagcatgatttataatcctttgggtacatacccagtaatgggatggctgggtcaaatgatatttctagttctagatccctgaggaatcaccacaccgacttccacaatggttgaactagtttacagtcccatcaacagtgtaaaagttttcctatttctccacatcctctccagcatctgttgtttcctgactttttaatgattgccactctaactggtgagagatggtatttcattgtggttttgatttgcttttctctgatgggcagtgac
i Pan_troglodytes.NBAG03000771.1                        C 0 C 0
e Eptesicus_fuscus.JH977687.1                             4707522   0 +   6522550 C
e Macroglossus_sobrinus.MacSob_scaffold_879                701732  90 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             39414   7 -     47444 I
e Petromus_typicus.PetTyp_scaffold_33007                    14204   7 -     36578 I
e Sorex_araneus.JH798170.1                               17767035   0 -  27805282 C
e Dinomys_branickii.DinBra_scaffold_1996                   157576   7 +    228994 I
e Erinaceus_europaeus.JH835290.1                         11534833   0 +  16010500 C
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           3336   1 -      6963 I
e Aplodontia_rufa.AprRuf_scaffold_156013                     4248   0 +      5067 C
e Oryctolagus_cuniculus.CM000803.1                      141876891   0 + 163896628 C
e Ochotona_princeps.JH802095.1                            4996611   7 -  23139505 I
e Lepus_americanus.LepAme_scaffold_62849                    13854   0 +     22452 C
e Perognathus_longimembris.PerPac_flattened_line_19359        624   0 +     49596 C
e Dipodomys_stephensi.DipSte_scaffold_44365                 28586   0 +     28912 C
e Dipodomys_ordii.KN672545.1                              3656943   0 +   4240102 C
e Suricata_suricatta.SurSur_flattened_line_20339            28154   1 +     62062 I
e Nomascus_siki_a.k141_595747                                  3307   0 +      4512 C
e Ziphius_cavirostris.ZipCav_flattened_line_127025           7494   0 -      8775 C
e Zalophus_californianus.ZalCal_flattened_line_4097        214862   1 -    227762 I
e Vulpes_lagopus.VulLag_flattened_line_2045                138881   1 -    281493 I
e Vicugna_pacos.KN269600.1                                1525243   0 -   2331223 C
e Ursus_maritimus.KK498671.1                              6515392   8 +  28682327 I
e Uropsilus_gracilis.UroGra_scaffold_69449                   1895   0 +     10241 C
e Tursiops_truncatus.MRVK01000923.1                      69313995   0 -  96451834 C
e Trichechus_manatus.JH594618.1                          16085913   0 +  31416278 C
e Tragulus_javanicus.TraJav_scaffold_14717                   5724   0 +     90398 C
e Tonatia_saurophila.TonSau_scaffold_3334                  136644   6 -    259118 I
e Tolypeutes_matacus.TolMat_scaffold_269431                  6072   1 +      6782 I
e Tapirus_terrestris.TapTer_scaffold_14939                  58413   1 +     99546 I
e Tapirus_indicus.TapInd_scaffold_176                      807701   1 +   1148477 I
e Tamandua_tetradactyla.TamTet_scaffold_26877               15268   0 +     45698 C
e Tadarida_brasiliensis.TadBra_scaffold_61492                 852   0 +     20549 C
e Sus_scrofa.CM000824.4                                 189272673   0 + 218635234 C
e Spilogale_gracilis.SpiGra_flattened_line_905             235391   1 -    276980 I
e Solenodon_paradoxus.SolPar_flattened_line_1012            19459   0 +    739146 C
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   32854   0 -    114521 C
e Saiga_tatarica.SaiTat_scaffold_82192                       8520   0 +     12214 C
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                19896   1 +    109198 I
e Rhinolophus_sinicus.LVEH01000179.1                      1788428   1 +   2252614 I
e Rangifer_tarandus.RanTarSib_scaffold_24239                16363   0 +     68503 C
e Puma_concolor.QAVW01000427.1                          131534940   9 - 161321710 I
e Pteropus_vampyrus.KN525959.1                             604516  10 -   3946241 I
e Pteropus_alecto.KB031157.1                             13246565  10 -  17261082 I
e Pteronura_brasiliensis.PteBra_flattened_line_1343        247267   1 -    344369 I
e Pteronotus_parnellii.KE867983.1                            4652   0 -     27784 C
e Procavia_capensis.ProCapCap_scaffold_149274                2467 1156 -      9567 I
e Platanista_gangetica.PlaMin_flattened_line_72990           5970   0 +     21690 C
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Phocoena_phocoena.PhoPho_flattened_line_11948            121883   0 -    122454 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    116381   1 -    135482 I
e Pantholops_hodgsonii.KE114631.1                         1066695   0 -   1292953 C
e Panthera_tigris.KE721879.1                              5028343   1 -   6340057 I
e Panthera_pardus.KV860323.1                              3638668   1 +  18214204 I
e Panthera_onca.PanOnc_flattened_line_1615                  34918   1 +    295523 I
e Ovis_canadensis.OviCan_scaffold_6251                      79060   0 +    140051 C
e Ovis_aries.CM001582.2                                 134077845   0 - 275406953 C
e Otocyon_megalotis.JAEUCK010005121.1                      308785   1 -    505867 I
e Orycteropus_afer.OryAfe_flattened_line_13509              60523   0 -     66828 C
e Orcinus_orca.KB316965.1                                 7225279   0 -   7562323 C
e Okapia_johnstoni.LVCL01S0017931.1                         37567   0 +     78940 C
e Odocoileus_virginianus.KZ101650.1                       1080249   0 +   1425656 C
e Odobenus_rosmarus.KB229369.1                             680135   1 -   3126709 I
e Nyctereutes_procyonoides.CAJHUB010000786.1                31501   1 +   3668941 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214  77 +     94413 I
e Neophocaena_asiaeorientalis.KZ688543.1                  3951594   0 -   4490290 C
e Neomonachus_schauinslandi.NINY01007774.1                4485468   1 -  14209539 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             5602   0 -      8794 C
e Myotis_myotis.MyoMyo_scaffold_6123                        12374   0 +     66751 C
e Myotis_lucifugus.GL429887.1                             3467131   0 -   3747815 C
e Myotis_davidii.KB114863.1                               5021053   0 +   6462685 C
e Myotis_brandtii.KE161952.1                               969629   0 +   8389877 C
e Mustela_putorius.JH417978.1                             4424956   1 -  28371801 I
e Murina_feae.MurFea_scaffold_2254                          22011   0 -    100666 C
e Mungos_mungo.MunMun_flattened_line_8729                  145494   1 -    168139 I
e Moschus_moschiferus.MosMos_scaffold_78805                  2069   0 -     19904 C
e Mormoops_blainvillei.MorMeg_scaffold_2952                162013   0 +    265003 C
e Monodon_monoceros.MonMon_M_scaffold_5598                 146982   0 +    154973 C
e Mirounga_angustirostris.MirAng_flattened_line_8852        12078   1 -    104932 I
e Miniopterus_schreibersii.MinSch_scaffold_24116            35151   0 +     45743 C
e Miniopterus_natalensis.LDJU01000022.1                   8210662   0 +  10048721 C
e Micronycteris_hirsuta.MicHir_scaffold_37978               23489   0 -     32043 C
e Microgale_talazaci.MicTal_scaffold_34660                  35502   0 -     48017 C
e Mesoplodon_bidens.MesBid_scaffold_227248                    881   0 -      1377 C
e Mellivora_capensis.MelCap_flattened_line_15433             1588   1 -     87323 I
e Megaderma_lyra.MegLyr_scaffold_3562                       64783 239 -    234502 I
e Manis_pentadactyla.KN017078.1                             36789   1 +     58827 I
e Manis_javanica.JSZB01003966.1                            146646   1 +    252755 I
e Lycaon_pictus.CM007556.1                               11088700   1 +  39895028 I
e Loxodonta_africana.GL010040.1                          20595391   0 -  62548349 C
e Lipotes_vexillifer.KE558548.1                            136554   0 +   3060487 C
e Leptonychotes_weddellii.KB714749.1                      3086562   1 -   3498232 I
e Lasiurus_borealis.LasBor_scaffold_59542                    4357   0 +     26176 C
e Kogia_breviceps.KogBre_flattened_line_35920               24204   0 +     37189 C
e Inia_geoffrensis.IniGeo_flattened_line_66725               9597   0 +     17520 C
e Hyaena_hyaena.HyaHya_flattened_line_20729                 17876   1 -     67322 I
e Hipposideros_galeritus.HipGal_scaffold_104691              8126   1 -      9143 I
e Hipposideros_armiger.JXIK01001085.1                      278976   1 -    477199 I
e Hippopotamus_amphibius.HipAmp_scaffold_1308              147697   0 +    277961 C
e Heterohyrax_brucei.HetBruBak_scaffold_25354               61360 1157 +     73687 I
e Hemitragus_hylocrius.HemHyl_scaffold_16669                28054   0 -     91191 C
e Helogale_parvula.HelPar_flattened_line_22962              17799   1 +     53719 I
e Giraffa_tippelskirchi.LVKQ01S012154.1                    181839   0 -    189561 C
e Felis_nigripes.FelNig_flattened_line_8080                 21776   9 +     52776 I
e Felis_catus_fca126.CM031420.1                         129280636   9 - 158578461 I
e Eubalaena_japonica.EubJap_flattened_line_7756             62061   0 +     89355 C
e Eschrichtius_robustus.EscRob_flattened_line_685          315608   0 +    330699 C
e Equus_przewalskii.ATBW01073585.1                          13549   1 +     92910 I
e Equus_caballus.CM000402.2                              13352060   1 +  41866177 I
e Equus_asinus.JREZ01000062.1                             5853555   1 -   7175178 I
e Enhydra_lutris.KZ291749.1                              85872776   1 +  99434291 I
e Elephantulus_edwardii.JH947210.1                        7816992 12417 +  15467074 I
e Elaphurus_davidianus.JRFZ01086400.1                     1492034   0 +   1727528 C
e Eidolon_helvum.KE772537.1                                 12831   1 +     24177 I
e Echinops_telfairi.JH980316.1                           22999510   0 -  44670279 C
e Diceros_bicornis.DicBicMic_scaffold_9545                   3767   1 +    151128 I
e Dicerorhinus_sumatrensis.PEKH010003161.1                 323115   1 +    993696 I
e Desmodus_rotundus.KZ672188.1                           18699583   0 -  18957592 C
e Delphinapterus_leucas.KZ290064.1                       80037392   0 -  96802777 C
e Dasypus_novemcinctus.JH568778.1                          184212   1 -   6883506 I
e Cryptoprocta_ferox.CryFer_flattened_line_19014            52601   1 -     70449 I
e Crocidura_indochinensis.CroInd_scaffold_848148              199   0 +      1327 C
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1008 325 -      5782 I
e Condylura_cristata.JH655880.1                          60614172   0 +  78930452 C
e Choloepus_hoffmanni.KN194586.1                           762343   0 +    964067 C
e Choloepus_didactylus.ChoDid_scaffold_36182                17038   0 -     21363 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_160623         4220   1 -      9338 I
e Catagonus_wagneri.CatWag_scaffold_1305                   159453   0 -    276539 C
e Carollia_perspicillata.CarPer_scaffold_4436               60300   0 +     67245 C
e Capra_hircus.CM004562.1                               135706997   0 - 157403528 C
e Capra_aegagrus.CM003214.1                              21325769   0 + 157394656 C
e Canis_lupus_orion.HG994411.1                           16456259   1 -  44759192 I
e Canis_lupus_familiaris.chr31                           11089244   1 +  39895921 I
e Canis_lupus_dingo.QKWQ01001993.1                       11266710   1 -  35597290 I
e Canis_lupus_VD.CanFam_VD_scaffold_16982                   15069   1 +     87036 I
e CanFam4.chr31                                          11520043   1 +  39901454 I
e Camelus_ferus.KB016973.1                                2973576   0 +   6889770 C
e Camelus_dromedarius.KN271192.1                           397840   0 -  15254737 C
e Camelus_bactrianus.KN276303.1                           3220139   0 -   8989139 C
e Bubalus_bubalis.KI419065.1                              1233348   0 -   1914593 C
e Bos_taurus.CM000177.6                                 136296268   0 - 158972876 C
e Bos_mutus.JH883513.1                                     573076   0 -    998990 C
e Bos_indicus.CM003021.1                                138140535   0 - 161108492 C
e Bison_bison.KN264915.1                                  6560420   0 +   6870073 C
e Beatragus_hunteri.BeaHun_scaffold_21644                   43804   0 -     72089 C
e Balaenoptera_bonaerensis.DF502048.1                        5940   0 -     13118 C
e Balaenoptera_acutorostrata.KI537095.1                  26380768   0 +  51448160 C
e Artibeus_jamaicensis.ArtJam_scaffold_41619                 9513   0 -     29036 C
e Antilocapra_americana.AntAmePen_scaffold_42841            31276   0 +     33004 C
e Anoura_caudifer.AnoCau_scaffold_422                      391097   0 -    631301 C
e Ammotragus_lervia.NIVO01013474.1                        3520694   0 +   4113121 C
e Ailurus_fulgens.LNAC01000003.1                          7095252   1 -  16596857 I
e Ailuropoda_melanoleuca.LNAT01000321.1                  10657900   1 +  23371972 I
e Acinonyx_jubatus.LLWD01000356.1                         2034585   9 +   3721120 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19574   7 -    119109 I
e Glis_glis.GliGli_scaffold_79770                           14338   0 -     18683 C
e Zapus_hudsonius.ZapHud_scaffold_64392                     16410   0 -     20485 C
e Jaculus_jaculus.JH725517.1                              8566514   0 +  11848649 C
e Hylobates_pileatus_a.tarseq_592                             34487   0 -     60944 C
e Hylobates_pileatus_b.ContigUN                                 14625328   0 -  25970782 C
e Allactaga_bullata.AllBul_scaffold_70162                   17500   0 -     22067 C
e Hylobates_muelleri.k141_1389047                            2584   0 -      2977 C
e Hylobates_klossii.k141_285563                               343 193 +      1026 I
e Hylobates_agilis.k141_1878600                               675   0 -      1230 C
e Hylobates_abbotti.k141_164775                               422   0 -      2073 C
e Galeopterus_variegatus.GalVar_scaffold_354               156881   0 +    324696 C
e Microtus_ochrogaster.CM001673.1                        22820341   4 -  98408828 I
e Xerus_inauris.XerIna_scaffold_7898                       127465   0 -    134049 C
e Varecia_variegata.k141_775891                             25501   3 -     33872 I
e Varecia_rubra.k141_432109                                  5966   3 -     20643 I
e Tupaia_tana.TupTan_flattened_line_68454                    5880   0 +     13056 C
e Tupaia_chinensis.KB320831.1                             2793694   0 -   3938065 C
e Trachypithecus_pileatus.k141_1022309                       3155   0 +     13828 C
e Trachypithecus_phayrei.ctg3                            44660847   0 -  44834318 C
e Trachypithecus_obscurus.k141_1115109                       6047   0 -     28054 C
e Trachypithecus_melamera.k141_699241                         801   0 -     24393 C
e Trachypithecus_leucocephalus.k141_381681                    925   0 +     12481 C
e Trachypithecus_laotum.k141_760702                          2644   0 +     14371 C
e Trachypithecus_hatinhensis.k141_504423                     3988   0 -     15592 C
e Trachypithecus_germaini.k141_868450                        1811   0 -     11566 C
e Trachypithecus_geei.k141_670367                           44008   0 -     54611 C
e Trachypithecus_francoisi.k141_768164                       2609   0 -     14244 C
e Trachypithecus_cristatus.k141_1011511                      2673   0 -     12939 C
e Trachypithecus_crepusculus.k141_1588528                   21287   0 -     32910 C
e Trachypithecus_auratus.k141_738098                        27555   0 +     38948 C
e Theropithecus_gelada.CM009951.1                       194008453   0 - 194193292 C
e Tarsius_wallacei.k141_48636                               60382   0 +     65473 C
e Tarsius_lariang.k141_609102                               27066   0 +     42269 C
e Spermophilus_dauricus.KZ294190.1                        2240350   0 +   2842873 C
e Sigmodon_hispidus.SigHis_scaffold_11332                  100847   0 -    120886 C
e Semnopithecus_vetulus.k141_1143185                        14399   0 +     30600 C
e Semnopithecus_schistaceus.k141_387461                     31359   0 +     42640 C
e Semnopithecus_priam.k141_410937                           38239   0 +     46263 C
e Semnopithecus_johnii.k141_785014                         119453   0 +    130994 C
e Semnopithecus_hypoleucos.k141_761524                       9450   0 +     20762 C
e Semnopithecus_entellus.k141_1572367                        4057   0 +     15331 C
e Sapajus_macrocephalus.k141_966464                         21354   0 -     62485 C
e Sapajus_apella.ctg10                                   17341993   0 -  30362882 C
e Saimiri_ustus.k141_1282476                                 5266   0 -     76454 C
e Saimiri_sciureus.k141_1947592                              5329   0 +     60816 C
e Saimiri_oerstedii.k141_841116                              5351   0 +     67014 C
e Saimiri_macrodon.k141_2087127                              5258   0 -     60842 C
e Saimiri_cassiquiarensis.k141_808270                        5316   0 +     34089 C
e Saimiri_boliviensis.NW_024100938.1                     15673403   0 -  43202129 C
e Rhinopithecus_strykeri.ctg4                            44857245   0 -  45163003 C
e Rhinopithecus_roxellana.NC_044549.1                   206378331   0 - 206558726 C
e Rhinopithecus_bieti.k119_554384                             854   0 -     17045 C
e Rattus_norvegicus.chr11                                13915860 1475 +  90463843 I
e Pygathrix_nigripes_a.k141_101123                             6444   0 +     18040 C
e Pygathrix_nigripes_b.ctg79                                 6807053   0 +   6970761 C
e Pygathrix_cinerea.k141_374971                             30565   0 +     56732 C
e Psammomys_obesus.NESX01026517.1                           36055   0 +     77221 C
e Propithecus_verreauxi.k141_158021                         39953   3 -     48185 I
e Propithecus_tattersalli.k141_907138                       17689   3 -     53241 I
e Propithecus_perrieri.k141_7554                            18055   3 +     27322 I
e Propithecus_edwardsi.k141_1317105                         36132   3 -     44753 I
e Propithecus_diadema.k141_577245                           43745   3 +     52369 I
e Propithecus_coronatus.k141_1353159                         4402   3 +     11805 I
e Propithecus_coquerelli.NW_012147863.1                     19492   3 -     30946 I
e Prolemur_simus.MPIZ01000048.1                           6849325   3 +  12164890 I
e Presbytis_mitrata.k141_860013                              6574   0 +     14865 C
e Presbytis_comata.k141_672698                               6444   0 -     15069 C
e Plecturocebus_moloch.k141_890597                          23981   0 -     75465 C
e Plecturocebus_miltoni.k141_841561                         13394   0 +    134592 C
e Plecturocebus_hoffmannsi.k141_985533                       1388   0 -    119457 C
e Plecturocebus_grovesi.k141_242819                         23671   0 +    152463 C
e Plecturocebus_dubius.k141_3565563                          4317   0 -     55515 C
e Plecturocebus_cupreus.k141_1145860                          234   0 -     43940 C
e Plecturocebus_cinerascens.k141_744510                     23598   0 +    147771 C
e Plecturocebus_caligatus.k141_2539816                      13998   0 -     98129 C
e Plecturocebus_brunneus.k141_498086                        23758   0 +     67491 C
e Plecturocebus_bernhardi.k141_959214                       23546   0 +     44506 C
e Pithecia_vanzolinii.k141_831006                           14206   0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13475303   0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          6303   0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        13075   0 -     16101 C
e Pithecia_hirsuta.k141_1152968                              9876   0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        25829   0 +     78826 C
e Pithecia_albicans.k141_991845                             44444   0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000036.1               26741183   0 +  26888534 C
e Piliocolobus_kirkii.k141_929665                            2705   0 +      7694 C
e Piliocolobus_gordonorum.k141_1270531                       3338   0 -     17985 C
e Piliocolobus_badius.k141_1987485                           2714   0 -      5908 C
e Peromyscus_maniculatus.KI615518.1                       4950911   0 -   8017169 C
e Perodicticus_potto.k141_713187                            25474   3 -     27972 I
e Perodicticus_ibeanus.k141_117958                           6160   3 -     23713 I
e Papio_ursinus.k141_1345919                                 2687   0 -      7628 C
e Papio_papio.k141_979496                                    6828   0 +     14967 C
e Papio_kindae.k141_5458022                                 68292   0 -    104429 C
e Papio_hamadryas.Contig15                               47514316   0 +  47705337 C
e Papio_cynocephalus.k141_883042                             5248   0 +      5367 C
e Papio_anubis.CM001492.2                               188156931   0 - 188283584 C
e Otolemur_garnettii.GL873528.1                          18009456   3 -  38779656 I
e Otolemur_crassicaudatus.k141_505435                        1475   3 -     53940 I
e Onychomys_torridus.OnyTor_scaffold_12578                  37664   0 +     62360 C
e Ondatra_zibethicus.OndZib_scaffold_6821                  125594   4 +    145789 I
e Octodon_degus.JH651621.1                                3686473   7 +  10294119 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65670190   0 +  89412551 C
e Nycticebus_coucang.k141_2051882                            4581   0 +      6470 C
e Nycticebus_bengalensis.LG16                            65567855   0 -  95554990 C
e Nasalis_larvatus.k141_153429                               9200   0 +     48152 C
e Nannospalax_galili.KL201303.1                            119159   6 +    362372 I
e Myocastor_coypus.MyoCoy_scaffold_3653                     90979   7 -    117718 I
e Muscardinus_avellanarius.MusAve_scaffold_9643             12843   0 +     98495 C
e Mus_spretus.CM004110.1                                 74333118   0 +  97876770 C
e Mus_pahari.LT608305.1                                  67556586   0 +  89017189 C
e Mus_musculus.chr16                                     75490383   0 +  98207768 C
e Mus_caroli.LT608236.1                                  70767307  11 +  92629107 I
e Mirza_zaza.k141_226143                                     6369   3 +      8497 I
e Miopithecus_ogouensis.k141_2935907                         2693   0 +     29742 C
e Microcebus_murinus.CM007691.1                          16510980   3 +  47401472 I
e Mesocricetus_auratus.KB708139.1                         1047473   0 -  26018355 C
e Meriones_unguiculatus.MerUng_scaffold_52233               13773   0 +     15977 C
e Marmota_marmota.CZRN01000005.1                         36874253   0 +  64221397 C
e Mandrillus_sphinx.Contig144                             4450964   0 -   4543643 C
e Mandrillus_leucophaeus.scaffold125                     43438144   0 -  43563597 C
e Macaca_tonkeana.k141_2870633                               5095   0 -     27140 C
e Macaca_thibetana.k99_662710                               17729   0 -     24607 C
e Macaca_silenus.Contig12                                43841559   0 +  43892939 C
e Macaca_siberu.k141_741907                                 16443   0 -     55006 C
e Macaca_radiata.k141_3680256                                2764   0 -     13212 C
e Macaca_nigra.k141_282495                                   5090   0 -     46448 C
e Macaca_nemestrina.KQ004885.1                           11446420   0 +  11645122 C
e Macaca_mulatta.NC_041755.1                            196036250   0 + 196197964 C
e Macaca_maura.k141_251854                                  46143   0 -     79256 C
e Macaca_leonina.k141_467472                                 2926   0 -      7381 C
e Macaca_fuscata.k119_599327                                 2341   0 -      2568 C
e Macaca_fascicularis.k141_155037                           47633   0 +     63263 C
e Macaca_cyclopis.k119_893486                                2818   0 -      3136 C
e Macaca_assamensis.Contig65                             12707176   0 +  12821369 C
e Macaca_arctoides.k141_2201161                             20719   0 +     74745 C
e Loris_tardigradus.ctg97                                 3779150   0 +   6799190 C
e Loris_lydekkerianus.k141_550999                           11401   0 +     84689 C
e Lophocebus_aterrimus.ctg55                             19248984   0 +  19376315 C
e Lepilemur_septentrionalis.k141_578524                     32347   3 -     33031 I
e Lepilemur_ruficaudatus.k141_617879                        79356   3 +    116806 I
e Lepilemur_dorsalis.k141_134267                            54094   3 +     63517 I
e Lepilemur_ankaranensis.k141_884009                        24708   3 +     39228 I
e Lemur_catta.scaffold_1                                258407958   3 - 285822530 I
e Lagothrix_lagothricha.k141_12968                          50838   0 -    147782 C
e Indri_indri.k141_5141390                                   1122   3 -      3181 I
e Ictidomys_tridecemlineatus.JH393315.1                   7126434   0 +  13083262 C
e Hystrix_cristata.HysCri_scaffold_50788                     6738   7 +     22540 I
e Heterocephalus_glaber.JH602058.1                        2551672   7 +  31725842 I
e Hapalemur_occidentalis.k141_797938                        46279   3 -     54384 I
e Hapalemur_meridionalis.k141_186231                        29651   3 -     42470 I
e Hapalemur_griseus.k141_1387522                             6402   3 +     56096 I
e Hapalemur_gilberti.k141_279011                             1076   3 -     11661 I
e Hapalemur_alaotrensis.k141_1280836                         2596   3 +     10286 I
e Graphiurus_murinus.GraMur_scaffold_4493                   77863   0 +    118900 C
e Galagoides_demidoff.k141_1769638                          11100   3 +     27357 I
e Galago_senegalensis.k141_964197                           14034   3 -     43889 I
e Galago_moholi.ctg555                                     211660   3 -    847004 I
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I
e Eulemur_sanfordi.k141_186399                              16595   3 -     29447 I
e Eulemur_rufus.k141_1620292                                33869   3 +     46535 I
e Eulemur_rubriventer.k141_411740                           19131   3 +     26808 I
e Eulemur_mongoz.k141_825972                                16675   3 +     27497 I
e Eulemur_fulvus.k141_653297                                12015   3 +    109717 I
e Eulemur_flavifrons.k141_903901                             8537   3 +     60246 I
e Eulemur_coronatus.k141_3240342                            12216   3 +     36558 I
e Eulemur_collaris.k141_311830                               5742   3 -      6809 I
e Eulemur_albifrons.k141_715837                              5810   3 +     13586 I
e Erythrocebus_patas.Contig8                             48776228   0 -  48907691 C
e Ellobius_talpinus.LOJH01090055.1                           7151   4 -      7838 I
e Ellobius_lutescens.LOEQ01003611.1                        240029   1 -    369425 I
e Dolichotis_patagonum.DolPat_scaffold_14102                36665   7 -     73477 I
e Daubentonia_madagascariensis.ctg11                     16845635   3 +  31942871 I
e Dasyprocta_punctata.DasPun_flattened_line_634             59439   7 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                18349   7 +     26546 I
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 31653   8 -     67205 I
e Ctenodactylus_gundi.CteGun_scaffold_447                  209008   0 -    956709 C
e Cricetulus_griseus.LT883672.1                          53029787   0 +  72327488 C
e Cricetomys_gambianus.CriGam_scaffold_949                 279115   0 -    399297 C
e Colobus_polykomos.k141_1406057                            17260   0 +     23629 C
e Colobus_guereza.LG08                                  147665275   0 + 156195979 C
e Colobus_angolensis.KN985967.1                          10887110   0 +  10971483 C
e Chlorocebus_sabaeus.CM001963.2                        101145346   0 + 101219884 C
e Chlorocebus_pygerythrus.k141_1486215                      34793   0 -     53260 C
e Chlorocebus_aethiops.ctg22                             15140178   0 -  15256731 C
e Chiropotes_sagulatus.k141_773804                          15987   0 +     40510 C
e Chiropotes_israelita.k141_1189915                         71807   0 +    196370 C
e Chinchilla_lanigera.JH721867.1                         15962308   7 +  43084221 I
e Cheracebus_torquatus.k141_315545                          47000   0 +     54541 C
e Cheracebus_regulus.k141_2128895                           42321   0 +     57117 C
e Cheracebus_lugens.k141_203936                             23281   0 +     25473 C
e Cheracebus_lucifer.k141_619653                             6263   0 -     18223 C
e Cheirogaleus_medius.k141_133808                            8812   3 +     13308 I
e Cheirogaleus_major.k141_1157592                           59764   3 -     68416 I
e Cercopithecus_roloway.k141_2263608                        22185   0 +     37128 C
e Cercopithecus_pogonias.k141_3109732                        2568   0 -     17744 C
e Cercopithecus_petaurista.k141_64532                        2590   0 -     25661 C
e Cercopithecus_nictitans.k141_1129315                       2815   0 +     35577 C
e Cercopithecus_neglectus.k141_2078027                      41809   0 -     45581 C
e Cercopithecus_mona.ctg12                               46478259   0 +  46592721 C
e Cercopithecus_albogularis.ctg51                              11991499   0 +  12117833 C
e Cercopithecus_lowei.k141_623764                           24973   0 +     35983 C
e Cercopithecus_hamlyni.k141_129805                          2814   0 +     16677 C
e Cercopithecus_diana.k141_2157192                             14   0 +     26591 C
e Cercopithecus_cephus.k141_598190                          30268   0 +     30494 C
e Cercopithecus_ascanius.k141_4123525                        2772   0 -     17608 C
e Cercocebus_torquatus.k141_3969582                         59882   0 -    107033 C
e Cercocebus_lunulatus.k141_4634644                          2573   0 -     21101 C
e Cercocebus_chrysogaster.k141_2328246                      27367   0 +     60454 C
e Cercocebus_atys.KQ010443.1                              6555890   0 +   6739814 C
e Cephalopachus_bancanus.k141_702587                         8638   0 +     21754 C
e Cebus_unicolor.k141_239009                                13235   0 +     25043 C
e Cebus_olivaceus.k141_93739                                 8992   0 -     26817 C
e Cebus_albifrons.Contig22                               18891448   0 -  29618158 C
e Cavia_tschudii.CavTsc_scaffold_488                       177346   7 +    436027 I
e Cavia_porcellus.DS562889.1                             15799155   7 -  24440124 I
e Cavia_aperea.AVPZ01000278.1                            15787219   7 -  24422027 I
e Castor_canadensis.CasCan_scaffold_47037                   31693   0 +     33760 C
e Carlito_syrichta.NW_007248099.1                          309614   0 +    345090 C
e Cacajao_melanocephalus.k141_1160263                        8221   0 -    134917 C
e Cacajao_hosomi.k141_303789                                15678   0 -    216513 C
e Cacajao_calvus.k141_96166                                 13635   0 +    125063 C
e Cacajao_ayresi.k141_724503                               114606   0 -    171031 C
e Avahi_peyrierasi.k141_798820                               1105   3 +      6337 I
e Avahi_laniger.k141_2840928                                 7489   3 -     16375 I
e Ateles_paniscus.k141_1631200                               6719   0 -     25888 C
e Ateles_marginatus.k141_899112                             64748   0 +    119057 C
e Ateles_geoffroyi_a.k141_1300742                             16756   0 -     58268 C
e Ateles_chamek.k141_1072810                                12253   0 +     89302 C
e Ateles_belzebuth.k141_1348307                             61240   0 +     85812 C
e Ateles_geoffroyi_b.tarseq_2582                             9539969   0 +  39197703 C
e Arctocebus_calabarensis.k141_587554                        1753   3 +      9265 I
e Aotus_vociferans.k141_718647                               6700   0 +     23246 C
e Aotus_trivirgatus.k141_1740727                             6698   0 -    104377 C
e Aotus_nancymaae.KZ196176.1                              5750109   0 +   9889416 C
e Aotus_griseimembra.k141_3275623                            6152   0 +     22701 C
e Aotus_azarae.k141_3170768                                 63210   0 +     78111 C
e Alouatta_seniculus.k141_1531728                             715   0 -      1692 C
e Alouatta_puruensis.k141_1284840                            4580   0 -      4927 C
e Alouatta_palliata.k141_2764429                              500   0 -      1480 C
e Alouatta_nigerrima.k141_3537692                             587   0 +      1660 C
e Alouatta_macconnelli.k141_2177643                           538   0 -      1868 C
e Alouatta_juara.k141_1244470                                1154   0 +      2129 C
e Alouatta_discolor.k141_811576                             11531   0 -     21359 C
e Alouatta_caraya.k141_1710068                                575   0 +      1555 C
e Alouatta_belzebul.k141_1818029                            10858   0 -     18050 C
e Allochrocebus_solatus.k141_371672                          2558   0 -     80423 C
e Allochrocebus_preussi.k141_1108977                         1599   0 +     38766 C
e Allochrocebus_lhoesti.k141_3566948                         2664   0 -     29318 C
e Allenopithecus_nigroviridis.k141_2469532                   1944   0 -     60446 C
e Acomys_cahirinus.AcoCah_scaffold_1625                    113328   0 -    189883 C
e Nomascus_siki_b.tarseq_80                             25604   0 -  18771707 C
e Nomascus_annamensis.k141_720788                             582   0 -      1065 C
e Symphalangus_syndactylus.tarseq_24                        15589   0 -  13920577 C
e Pongo_pygmaeus.ctg62                                   19808481   0 +  19899266 C
e Pongo_abelii.NDHI03003816.1                              187833   0 -    373494 C
e Nomascus_gabriellae.k141_1004198                            453   0 +      1448 C
e Nomascus_concolor.k141_226614                              1886  62 -      5092 I
e Hoolock_leuconedys.ctg79                                      5634  36 -   7690867 I
e Gorilla_gorilla.LT578340.1                            119653047   0 - 195582420 C
e Gorilla_beringei.k141_111300                               5947   0 -     14630 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               13240 415 +    209709 agcattttttcttgtgttttttggctgcataaatgtcttctttttagaagtgtctgttcatatccttctcccactttttgatggggttgtttttttcttgtaaatttgtttgagttcattgtagattctggatattagccgtttgtcagatgagtaggttgtgaaacttttctcccattctgtatgttgcctgttcactctgatggtggtttcttttgctgtgcagaagctctttagtttaattagatcccatttgtcaattttggcttttgttgccattgcttttggtgttttagacatgaagtccttgcccgtgcctatgccctgaatggtattgcctagt-ttttttctatgg--tttttataattttaggtctaacatgtaagtctttaatccatcttgaattaatttttgtat
s Pan_troglodytes.NBAG03000771.1                           181290 415 +    210065 agcattttttcatgtgttttttggctgcaaaaatgtcttcttttgagaagggtctgttcatatcctttccccactttttgatggggttgtttttttcttgtaaatttgttggagttcattgtagattctggatattagccctttgtcagatgagtaggttgtgaaacttttctcccattctgtaggttgcctgttcactctgatggtggtttcttttgctgtgcagaagctctttagtttaattagaccccatttgtcaattttggcttttgttgccattgcttttggtgttttagacatgaagtccttgcccatgcctatgtcctgaatggtattgcctagt-ttttttctatgg--tttttatgattttaggtctaacatgtaagtctttaatccatcttgaattaatttttgtat
i Pan_troglodytes.NBAG03000771.1                        C 0 C 0
e Eptesicus_fuscus.JH977687.1                             4707522   0 +   6522550 C
e Macroglossus_sobrinus.MacSob_scaffold_879                701732  90 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             39414   7 -     47444 I
e Petromus_typicus.PetTyp_scaffold_33007                    14204   7 -     36578 I
e Sorex_araneus.JH798170.1                               17767035   0 -  27805282 C
e Dinomys_branickii.DinBra_scaffold_1996                   157576   7 +    228994 I
e Erinaceus_europaeus.JH835290.1                         11534833   0 +  16010500 C
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           3336   1 -      6963 I
e Aplodontia_rufa.AprRuf_scaffold_156013                     4248   0 +      5067 C
e Oryctolagus_cuniculus.CM000803.1                      141876891   0 + 163896628 C
e Ochotona_princeps.JH802095.1                            4996611   7 -  23139505 I
e Lepus_americanus.LepAme_scaffold_62849                    13854   0 +     22452 C
e Perognathus_longimembris.PerPac_flattened_line_19359        624   0 +     49596 C
e Dipodomys_stephensi.DipSte_scaffold_44365                 28586   0 +     28912 C
e Dipodomys_ordii.KN672545.1                              3656943   0 +   4240102 C
e Suricata_suricatta.SurSur_flattened_line_20339            28154   1 +     62062 I
e Nomascus_siki_a.k141_595747                                  3307   0 +      4512 C
e Ziphius_cavirostris.ZipCav_flattened_line_127025           7494   0 -      8775 C
e Zalophus_californianus.ZalCal_flattened_line_4097        214862   1 -    227762 I
e Vulpes_lagopus.VulLag_flattened_line_2045                138881   1 -    281493 I
e Vicugna_pacos.KN269600.1                                1525243   0 -   2331223 C
e Ursus_maritimus.KK498671.1                              6515392   8 +  28682327 I
e Uropsilus_gracilis.UroGra_scaffold_69449                   1895   0 +     10241 C
e Tursiops_truncatus.MRVK01000923.1                      69313995   0 -  96451834 C
e Trichechus_manatus.JH594618.1                          16085913   0 +  31416278 C
e Tragulus_javanicus.TraJav_scaffold_14717                   5724   0 +     90398 C
e Tonatia_saurophila.TonSau_scaffold_3334                  136644   6 -    259118 I
e Tolypeutes_matacus.TolMat_scaffold_269431                  6072   1 +      6782 I
e Tapirus_terrestris.TapTer_scaffold_14939                  58413   1 +     99546 I
e Tapirus_indicus.TapInd_scaffold_176                      807701   1 +   1148477 I
e Tamandua_tetradactyla.TamTet_scaffold_26877               15268   0 +     45698 C
e Tadarida_brasiliensis.TadBra_scaffold_61492                 852   0 +     20549 C
e Sus_scrofa.CM000824.4                                 189272673   0 + 218635234 C
e Spilogale_gracilis.SpiGra_flattened_line_905             235391   1 -    276980 I
e Solenodon_paradoxus.SolPar_flattened_line_1012            19459   0 +    739146 C
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   32854   0 -    114521 C
e Saiga_tatarica.SaiTat_scaffold_82192                       8520   0 +     12214 C
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                19896   1 +    109198 I
e Rhinolophus_sinicus.LVEH01000179.1                      1788428   1 +   2252614 I
e Rangifer_tarandus.RanTarSib_scaffold_24239                16363   0 +     68503 C
e Puma_concolor.QAVW01000427.1                          131534940   9 - 161321710 I
e Pteropus_vampyrus.KN525959.1                             604516  10 -   3946241 I
e Pteropus_alecto.KB031157.1                             13246565  10 -  17261082 I
e Pteronura_brasiliensis.PteBra_flattened_line_1343        247267   1 -    344369 I
e Pteronotus_parnellii.KE867983.1                            4652   0 -     27784 C
e Procavia_capensis.ProCapCap_scaffold_149274                2467 1156 -      9567 I
e Platanista_gangetica.PlaMin_flattened_line_72990           5970   0 +     21690 C
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Phocoena_phocoena.PhoPho_flattened_line_11948            121883   0 -    122454 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    116381   1 -    135482 I
e Pantholops_hodgsonii.KE114631.1                         1066695   0 -   1292953 C
e Panthera_tigris.KE721879.1                              5028343   1 -   6340057 I
e Panthera_pardus.KV860323.1                              3638668   1 +  18214204 I
e Panthera_onca.PanOnc_flattened_line_1615                  34918   1 +    295523 I
e Ovis_canadensis.OviCan_scaffold_6251                      79060   0 +    140051 C
e Ovis_aries.CM001582.2                                 134077845   0 - 275406953 C
e Otocyon_megalotis.JAEUCK010005121.1                      308785   1 -    505867 I
e Orycteropus_afer.OryAfe_flattened_line_13509              60523   0 -     66828 C
e Orcinus_orca.KB316965.1                                 7225279   0 -   7562323 C
e Okapia_johnstoni.LVCL01S0017931.1                         37567   0 +     78940 C
e Odocoileus_virginianus.KZ101650.1                       1080249   0 +   1425656 C
e Odobenus_rosmarus.KB229369.1                             680135   1 -   3126709 I
e Nyctereutes_procyonoides.CAJHUB010000786.1                31501   1 +   3668941 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214  77 +     94413 I
e Neophocaena_asiaeorientalis.KZ688543.1                  3951594   0 -   4490290 C
e Neomonachus_schauinslandi.NINY01007774.1                4485468   1 -  14209539 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             5602   0 -      8794 C
e Myotis_myotis.MyoMyo_scaffold_6123                        12374   0 +     66751 C
e Myotis_lucifugus.GL429887.1                             3467131   0 -   3747815 C
e Myotis_davidii.KB114863.1                               5021053   0 +   6462685 C
e Myotis_brandtii.KE161952.1                               969629   0 +   8389877 C
e Mustela_putorius.JH417978.1                             4424956   1 -  28371801 I
e Murina_feae.MurFea_scaffold_2254                          22011   0 -    100666 C
e Mungos_mungo.MunMun_flattened_line_8729                  145494   1 -    168139 I
e Moschus_moschiferus.MosMos_scaffold_78805                  2069   0 -     19904 C
e Mormoops_blainvillei.MorMeg_scaffold_2952                162013   0 +    265003 C
e Monodon_monoceros.MonMon_M_scaffold_5598                 146982   0 +    154973 C
e Mirounga_angustirostris.MirAng_flattened_line_8852        12078   1 -    104932 I
e Miniopterus_schreibersii.MinSch_scaffold_24116            35151   0 +     45743 C
e Miniopterus_natalensis.LDJU01000022.1                   8210662   0 +  10048721 C
e Micronycteris_hirsuta.MicHir_scaffold_37978               23489   0 -     32043 C
e Microgale_talazaci.MicTal_scaffold_34660                  35502   0 -     48017 C
e Mesoplodon_bidens.MesBid_scaffold_227248                    881   0 -      1377 C
e Mellivora_capensis.MelCap_flattened_line_15433             1588   1 -     87323 I
e Megaderma_lyra.MegLyr_scaffold_3562                       64783 239 -    234502 I
e Manis_pentadactyla.KN017078.1                             36789   1 +     58827 I
e Manis_javanica.JSZB01003966.1                            146646   1 +    252755 I
e Lycaon_pictus.CM007556.1                               11088700   1 +  39895028 I
e Loxodonta_africana.GL010040.1                          20595391   0 -  62548349 C
e Lipotes_vexillifer.KE558548.1                            136554   0 +   3060487 C
e Leptonychotes_weddellii.KB714749.1                      3086562   1 -   3498232 I
e Lasiurus_borealis.LasBor_scaffold_59542                    4357   0 +     26176 C
e Kogia_breviceps.KogBre_flattened_line_35920               24204   0 +     37189 C
e Inia_geoffrensis.IniGeo_flattened_line_66725               9597   0 +     17520 C
e Hyaena_hyaena.HyaHya_flattened_line_20729                 17876   1 -     67322 I
e Hipposideros_galeritus.HipGal_scaffold_104691              8126   1 -      9143 I
e Hipposideros_armiger.JXIK01001085.1                      278976   1 -    477199 I
e Hippopotamus_amphibius.HipAmp_scaffold_1308              147697   0 +    277961 C
e Heterohyrax_brucei.HetBruBak_scaffold_25354               61360 1157 +     73687 I
e Hemitragus_hylocrius.HemHyl_scaffold_16669                28054   0 -     91191 C
e Helogale_parvula.HelPar_flattened_line_22962              17799   1 +     53719 I
e Giraffa_tippelskirchi.LVKQ01S012154.1                    181839   0 -    189561 C
e Felis_nigripes.FelNig_flattened_line_8080                 21776   9 +     52776 I
e Felis_catus_fca126.CM031420.1                         129280636   9 - 158578461 I
e Eubalaena_japonica.EubJap_flattened_line_7756             62061   0 +     89355 C
e Eschrichtius_robustus.EscRob_flattened_line_685          315608   0 +    330699 C
e Equus_przewalskii.ATBW01073585.1                          13549   1 +     92910 I
e Equus_caballus.CM000402.2                              13352060   1 +  41866177 I
e Equus_asinus.JREZ01000062.1                             5853555   1 -   7175178 I
e Enhydra_lutris.KZ291749.1                              85872776   1 +  99434291 I
e Elephantulus_edwardii.JH947210.1                        7816992 12417 +  15467074 I
e Elaphurus_davidianus.JRFZ01086400.1                     1492034   0 +   1727528 C
e Eidolon_helvum.KE772537.1                                 12831   1 +     24177 I
e Echinops_telfairi.JH980316.1                           22999510   0 -  44670279 C
e Diceros_bicornis.DicBicMic_scaffold_9545                   3767   1 +    151128 I
e Dicerorhinus_sumatrensis.PEKH010003161.1                 323115   1 +    993696 I
e Desmodus_rotundus.KZ672188.1                           18699583   0 -  18957592 C
e Delphinapterus_leucas.KZ290064.1                       80037392   0 -  96802777 C
e Dasypus_novemcinctus.JH568778.1                          184212   1 -   6883506 I
e Cryptoprocta_ferox.CryFer_flattened_line_19014            52601   1 -     70449 I
e Crocidura_indochinensis.CroInd_scaffold_848148              199   0 +      1327 C
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1008 325 -      5782 I
e Condylura_cristata.JH655880.1                          60614172   0 +  78930452 C
e Choloepus_hoffmanni.KN194586.1                           762343   0 +    964067 C
e Choloepus_didactylus.ChoDid_scaffold_36182                17038   0 -     21363 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_160623         4220   1 -      9338 I
e Catagonus_wagneri.CatWag_scaffold_1305                   159453   0 -    276539 C
e Carollia_perspicillata.CarPer_scaffold_4436               60300   0 +     67245 C
e Capra_hircus.CM004562.1                               135706997   0 - 157403528 C
e Capra_aegagrus.CM003214.1                              21325769   0 + 157394656 C
e Canis_lupus_orion.HG994411.1                           16456259   1 -  44759192 I
e Canis_lupus_familiaris.chr31                           11089244   1 +  39895921 I
e Canis_lupus_dingo.QKWQ01001993.1                       11266710   1 -  35597290 I
e Canis_lupus_VD.CanFam_VD_scaffold_16982                   15069   1 +     87036 I
e CanFam4.chr31                                          11520043   1 +  39901454 I
e Camelus_ferus.KB016973.1                                2973576   0 +   6889770 C
e Camelus_dromedarius.KN271192.1                           397840   0 -  15254737 C
e Camelus_bactrianus.KN276303.1                           3220139   0 -   8989139 C
e Bubalus_bubalis.KI419065.1                              1233348   0 -   1914593 C
e Bos_taurus.CM000177.6                                 136296268   0 - 158972876 C
e Bos_mutus.JH883513.1                                     573076   0 -    998990 C
e Bos_indicus.CM003021.1                                138140535   0 - 161108492 C
e Bison_bison.KN264915.1                                  6560420   0 +   6870073 C
e Beatragus_hunteri.BeaHun_scaffold_21644                   43804   0 -     72089 C
e Balaenoptera_bonaerensis.DF502048.1                        5940   0 -     13118 C
e Balaenoptera_acutorostrata.KI537095.1                  26380768   0 +  51448160 C
e Artibeus_jamaicensis.ArtJam_scaffold_41619                 9513   0 -     29036 C
e Antilocapra_americana.AntAmePen_scaffold_42841            31276   0 +     33004 C
e Anoura_caudifer.AnoCau_scaffold_422                      391097   0 -    631301 C
e Ammotragus_lervia.NIVO01013474.1                        3520694   0 +   4113121 C
e Ailurus_fulgens.LNAC01000003.1                          7095252   1 -  16596857 I
e Ailuropoda_melanoleuca.LNAT01000321.1                  10657900   1 +  23371972 I
e Acinonyx_jubatus.LLWD01000356.1                         2034585   9 +   3721120 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19574   7 -    119109 I
e Glis_glis.GliGli_scaffold_79770                           14338   0 -     18683 C
e Zapus_hudsonius.ZapHud_scaffold_64392                     16410   0 -     20485 C
e Jaculus_jaculus.JH725517.1                              8566514   0 +  11848649 C
e Hylobates_pileatus_a.tarseq_592                             34487   0 -     60944 C
e Hylobates_pileatus_b.ContigUN                                 14625328   0 -  25970782 C
e Allactaga_bullata.AllBul_scaffold_70162                   17500   0 -     22067 C
e Hylobates_muelleri.k141_1389047                            2584   0 -      2977 C
e Hylobates_klossii.k141_285563                               343 193 +      1026 I
e Hylobates_agilis.k141_1878600                               675   0 -      1230 C
e Hylobates_abbotti.k141_164775                               422   0 -      2073 C
e Galeopterus_variegatus.GalVar_scaffold_354               156881   0 +    324696 C
e Microtus_ochrogaster.CM001673.1                        22820341   4 -  98408828 I
e Xerus_inauris.XerIna_scaffold_7898                       127465   0 -    134049 C
e Varecia_variegata.k141_775891                             25501   3 -     33872 I
e Varecia_rubra.k141_432109                                  5966   3 -     20643 I
e Tupaia_tana.TupTan_flattened_line_68454                    5880   0 +     13056 C
e Tupaia_chinensis.KB320831.1                             2793694   0 -   3938065 C
e Trachypithecus_pileatus.k141_1022309                       3155   0 +     13828 C
e Trachypithecus_phayrei.ctg3                            44660847   0 -  44834318 C
e Trachypithecus_obscurus.k141_1115109                       6047   0 -     28054 C
e Trachypithecus_melamera.k141_699241                         801   0 -     24393 C
e Trachypithecus_leucocephalus.k141_381681                    925   0 +     12481 C
e Trachypithecus_laotum.k141_760702                          2644   0 +     14371 C
e Trachypithecus_hatinhensis.k141_504423                     3988   0 -     15592 C
e Trachypithecus_germaini.k141_868450                        1811   0 -     11566 C
e Trachypithecus_geei.k141_670367                           44008   0 -     54611 C
e Trachypithecus_francoisi.k141_768164                       2609   0 -     14244 C
e Trachypithecus_cristatus.k141_1011511                      2673   0 -     12939 C
e Trachypithecus_crepusculus.k141_1588528                   21287   0 -     32910 C
e Trachypithecus_auratus.k141_738098                        27555   0 +     38948 C
e Theropithecus_gelada.CM009951.1                       194008453   0 - 194193292 C
e Tarsius_wallacei.k141_48636                               60382   0 +     65473 C
e Tarsius_lariang.k141_609102                               27066   0 +     42269 C
e Spermophilus_dauricus.KZ294190.1                        2240350   0 +   2842873 C
e Sigmodon_hispidus.SigHis_scaffold_11332                  100847   0 -    120886 C
e Semnopithecus_vetulus.k141_1143185                        14399   0 +     30600 C
e Semnopithecus_schistaceus.k141_387461                     31359   0 +     42640 C
e Semnopithecus_priam.k141_410937                           38239   0 +     46263 C
e Semnopithecus_johnii.k141_785014                         119453   0 +    130994 C
e Semnopithecus_hypoleucos.k141_761524                       9450   0 +     20762 C
e Semnopithecus_entellus.k141_1572367                        4057   0 +     15331 C
e Sapajus_macrocephalus.k141_966464                         21354   0 -     62485 C
e Sapajus_apella.ctg10                                   17341993   0 -  30362882 C
e Saimiri_ustus.k141_1282476                                 5266   0 -     76454 C
e Saimiri_sciureus.k141_1947592                              5329   0 +     60816 C
e Saimiri_oerstedii.k141_841116                              5351   0 +     67014 C
e Saimiri_macrodon.k141_2087127                              5258   0 -     60842 C
e Saimiri_cassiquiarensis.k141_808270                        5316   0 +     34089 C
e Saimiri_boliviensis.NW_024100938.1                     15673403   0 -  43202129 C
e Rhinopithecus_strykeri.ctg4                            44857245   0 -  45163003 C
e Rhinopithecus_roxellana.NC_044549.1                   206378331   0 - 206558726 C
e Rhinopithecus_bieti.k119_554384                             854   0 -     17045 C
e Rattus_norvegicus.chr11                                13915860 1475 +  90463843 I
e Pygathrix_nigripes_a.k141_101123                             6444   0 +     18040 C
e Pygathrix_nigripes_b.ctg79                                 6807053   0 +   6970761 C
e Pygathrix_cinerea.k141_374971                             30565   0 +     56732 C
e Psammomys_obesus.NESX01026517.1                           36055   0 +     77221 C
e Propithecus_verreauxi.k141_158021                         39953   3 -     48185 I
e Propithecus_tattersalli.k141_907138                       17689   3 -     53241 I
e Propithecus_perrieri.k141_7554                            18055   3 +     27322 I
e Propithecus_edwardsi.k141_1317105                         36132   3 -     44753 I
e Propithecus_diadema.k141_577245                           43745   3 +     52369 I
e Propithecus_coronatus.k141_1353159                         4402   3 +     11805 I
e Propithecus_coquerelli.NW_012147863.1                     19492   3 -     30946 I
e Prolemur_simus.MPIZ01000048.1                           6849325   3 +  12164890 I
e Presbytis_mitrata.k141_860013                              6574   0 +     14865 C
e Presbytis_comata.k141_672698                               6444   0 -     15069 C
e Plecturocebus_moloch.k141_890597                          23981   0 -     75465 C
e Plecturocebus_miltoni.k141_841561                         13394   0 +    134592 C
e Plecturocebus_hoffmannsi.k141_985533                       1388   0 -    119457 C
e Plecturocebus_grovesi.k141_242819                         23671   0 +    152463 C
e Plecturocebus_dubius.k141_3565563                          4317   0 -     55515 C
e Plecturocebus_cupreus.k141_1145860                          234   0 -     43940 C
e Plecturocebus_cinerascens.k141_744510                     23598   0 +    147771 C
e Plecturocebus_caligatus.k141_2539816                      13998   0 -     98129 C
e Plecturocebus_brunneus.k141_498086                        23758   0 +     67491 C
e Plecturocebus_bernhardi.k141_959214                       23546   0 +     44506 C
e Pithecia_vanzolinii.k141_831006                           14206   0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13475303   0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          6303   0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        13075   0 -     16101 C
e Pithecia_hirsuta.k141_1152968                              9876   0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        25829   0 +     78826 C
e Pithecia_albicans.k141_991845                             44444   0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000036.1               26741183   0 +  26888534 C
e Piliocolobus_kirkii.k141_929665                            2705   0 +      7694 C
e Piliocolobus_gordonorum.k141_1270531                       3338   0 -     17985 C
e Piliocolobus_badius.k141_1987485                           2714   0 -      5908 C
e Peromyscus_maniculatus.KI615518.1                       4950911   0 -   8017169 C
e Perodicticus_potto.k141_713187                            25474   3 -     27972 I
e Perodicticus_ibeanus.k141_117958                           6160   3 -     23713 I
e Papio_ursinus.k141_1345919                                 2687   0 -      7628 C
e Papio_papio.k141_979496                                    6828   0 +     14967 C
e Papio_kindae.k141_5458022                                 68292   0 -    104429 C
e Papio_hamadryas.Contig15                               47514316   0 +  47705337 C
e Papio_cynocephalus.k141_883042                             5248   0 +      5367 C
e Papio_anubis.CM001492.2                               188156931   0 - 188283584 C
e Otolemur_garnettii.GL873528.1                          18009456   3 -  38779656 I
e Otolemur_crassicaudatus.k141_505435                        1475   3 -     53940 I
e Onychomys_torridus.OnyTor_scaffold_12578                  37664   0 +     62360 C
e Ondatra_zibethicus.OndZib_scaffold_6821                  125594   4 +    145789 I
e Octodon_degus.JH651621.1                                3686473   7 +  10294119 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65670190   0 +  89412551 C
e Nycticebus_coucang.k141_2051882                            4581   0 +      6470 C
e Nycticebus_bengalensis.LG16                            65567855   0 -  95554990 C
e Nasalis_larvatus.k141_153429                               9200   0 +     48152 C
e Nannospalax_galili.KL201303.1                            119159   6 +    362372 I
e Myocastor_coypus.MyoCoy_scaffold_3653                     90979   7 -    117718 I
e Muscardinus_avellanarius.MusAve_scaffold_9643             12843   0 +     98495 C
e Mus_spretus.CM004110.1                                 74333118   0 +  97876770 C
e Mus_pahari.LT608305.1                                  67556586   0 +  89017189 C
e Mus_musculus.chr16                                     75490383   0 +  98207768 C
e Mus_caroli.LT608236.1                                  70767307  11 +  92629107 I
e Mirza_zaza.k141_226143                                     6369   3 +      8497 I
e Miopithecus_ogouensis.k141_2935907                         2693   0 +     29742 C
e Microcebus_murinus.CM007691.1                          16510980   3 +  47401472 I
e Mesocricetus_auratus.KB708139.1                         1047473   0 -  26018355 C
e Meriones_unguiculatus.MerUng_scaffold_52233               13773   0 +     15977 C
e Marmota_marmota.CZRN01000005.1                         36874253   0 +  64221397 C
e Mandrillus_sphinx.Contig144                             4450964   0 -   4543643 C
e Mandrillus_leucophaeus.scaffold125                     43438144   0 -  43563597 C
e Macaca_tonkeana.k141_2870633                               5095   0 -     27140 C
e Macaca_thibetana.k99_662710                               17729   0 -     24607 C
e Macaca_silenus.Contig12                                43841559   0 +  43892939 C
e Macaca_siberu.k141_741907                                 16443   0 -     55006 C
e Macaca_radiata.k141_3680256                                2764   0 -     13212 C
e Macaca_nigra.k141_282495                                   5090   0 -     46448 C
e Macaca_nemestrina.KQ004885.1                           11446420   0 +  11645122 C
e Macaca_mulatta.NC_041755.1                            196036250   0 + 196197964 C
e Macaca_maura.k141_251854                                  46143   0 -     79256 C
e Macaca_leonina.k141_467472                                 2926   0 -      7381 C
e Macaca_fuscata.k119_599327                                 2341   0 -      2568 C
e Macaca_fascicularis.k141_155037                           47633   0 +     63263 C
e Macaca_cyclopis.k119_893486                                2818   0 -      3136 C
e Macaca_assamensis.Contig65                             12707176   0 +  12821369 C
e Macaca_arctoides.k141_2201161                             20719   0 +     74745 C
e Loris_tardigradus.ctg97                                 3779150   0 +   6799190 C
e Loris_lydekkerianus.k141_550999                           11401   0 +     84689 C
e Lophocebus_aterrimus.ctg55                             19248984   0 +  19376315 C
e Lepilemur_septentrionalis.k141_578524                     32347   3 -     33031 I
e Lepilemur_ruficaudatus.k141_617879                        79356   3 +    116806 I
e Lepilemur_dorsalis.k141_134267                            54094   3 +     63517 I
e Lepilemur_ankaranensis.k141_884009                        24708   3 +     39228 I
e Lemur_catta.scaffold_1                                258407958   3 - 285822530 I
e Lagothrix_lagothricha.k141_12968                          50838   0 -    147782 C
e Indri_indri.k141_5141390                                   1122   3 -      3181 I
e Ictidomys_tridecemlineatus.JH393315.1                   7126434   0 +  13083262 C
e Hystrix_cristata.HysCri_scaffold_50788                     6738   7 +     22540 I
e Heterocephalus_glaber.JH602058.1                        2551672   7 +  31725842 I
e Hapalemur_occidentalis.k141_797938                        46279   3 -     54384 I
e Hapalemur_meridionalis.k141_186231                        29651   3 -     42470 I
e Hapalemur_griseus.k141_1387522                             6402   3 +     56096 I
e Hapalemur_gilberti.k141_279011                             1076   3 -     11661 I
e Hapalemur_alaotrensis.k141_1280836                         2596   3 +     10286 I
e Graphiurus_murinus.GraMur_scaffold_4493                   77863   0 +    118900 C
e Galagoides_demidoff.k141_1769638                          11100   3 +     27357 I
e Galago_senegalensis.k141_964197                           14034   3 -     43889 I
e Galago_moholi.ctg555                                     211660   3 -    847004 I
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I
e Eulemur_sanfordi.k141_186399                              16595   3 -     29447 I
e Eulemur_rufus.k141_1620292                                33869   3 +     46535 I
e Eulemur_rubriventer.k141_411740                           19131   3 +     26808 I
e Eulemur_mongoz.k141_825972                                16675   3 +     27497 I
e Eulemur_fulvus.k141_653297                                12015   3 +    109717 I
e Eulemur_flavifrons.k141_903901                             8537   3 +     60246 I
e Eulemur_coronatus.k141_3240342                            12216   3 +     36558 I
e Eulemur_collaris.k141_311830                               5742   3 -      6809 I
e Eulemur_albifrons.k141_715837                              5810   3 +     13586 I
e Erythrocebus_patas.Contig8                             48776228   0 -  48907691 C
e Ellobius_talpinus.LOJH01090055.1                           7151   4 -      7838 I
e Ellobius_lutescens.LOEQ01003611.1                        240029   1 -    369425 I
e Dolichotis_patagonum.DolPat_scaffold_14102                36665   7 -     73477 I
e Daubentonia_madagascariensis.ctg11                     16845635   3 +  31942871 I
e Dasyprocta_punctata.DasPun_flattened_line_634             59439   7 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                18349   7 +     26546 I
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 31653   8 -     67205 I
e Ctenodactylus_gundi.CteGun_scaffold_447                  209008   0 -    956709 C
e Cricetulus_griseus.LT883672.1                          53029787   0 +  72327488 C
e Cricetomys_gambianus.CriGam_scaffold_949                 279115   0 -    399297 C
e Colobus_polykomos.k141_1406057                            17260   0 +     23629 C
e Colobus_guereza.LG08                                  147665275   0 + 156195979 C
e Colobus_angolensis.KN985967.1                          10887110   0 +  10971483 C
e Chlorocebus_sabaeus.CM001963.2                        101145346   0 + 101219884 C
e Chlorocebus_pygerythrus.k141_1486215                      34793   0 -     53260 C
e Chlorocebus_aethiops.ctg22                             15140178   0 -  15256731 C
e Chiropotes_sagulatus.k141_773804                          15987   0 +     40510 C
e Chiropotes_israelita.k141_1189915                         71807   0 +    196370 C
e Chinchilla_lanigera.JH721867.1                         15962308   7 +  43084221 I
e Cheracebus_torquatus.k141_315545                          47000   0 +     54541 C
e Cheracebus_regulus.k141_2128895                           42321   0 +     57117 C
e Cheracebus_lugens.k141_203936                             23281   0 +     25473 C
e Cheracebus_lucifer.k141_619653                             6263   0 -     18223 C
e Cheirogaleus_medius.k141_133808                            8812   3 +     13308 I
e Cheirogaleus_major.k141_1157592                           59764   3 -     68416 I
e Cercopithecus_roloway.k141_2263608                        22185   0 +     37128 C
e Cercopithecus_pogonias.k141_3109732                        2568   0 -     17744 C
e Cercopithecus_petaurista.k141_64532                        2590   0 -     25661 C
e Cercopithecus_nictitans.k141_1129315                       2815   0 +     35577 C
e Cercopithecus_neglectus.k141_2078027                      41809   0 -     45581 C
e Cercopithecus_mona.ctg12                               46478259   0 +  46592721 C
e Cercopithecus_albogularis.ctg51                              11991499   0 +  12117833 C
e Cercopithecus_lowei.k141_623764                           24973   0 +     35983 C
e Cercopithecus_hamlyni.k141_129805                          2814   0 +     16677 C
e Cercopithecus_diana.k141_2157192                             14   0 +     26591 C
e Cercopithecus_cephus.k141_598190                          30268   0 +     30494 C
e Cercopithecus_ascanius.k141_4123525                        2772   0 -     17608 C
e Cercocebus_torquatus.k141_3969582                         59882   0 -    107033 C
e Cercocebus_lunulatus.k141_4634644                          2573   0 -     21101 C
e Cercocebus_chrysogaster.k141_2328246                      27367   0 +     60454 C
e Cercocebus_atys.KQ010443.1                              6555890   0 +   6739814 C
e Cephalopachus_bancanus.k141_702587                         8638   0 +     21754 C
e Cebus_unicolor.k141_239009                                13235   0 +     25043 C
e Cebus_olivaceus.k141_93739                                 8992   0 -     26817 C
e Cebus_albifrons.Contig22                               18891448   0 -  29618158 C
e Cavia_tschudii.CavTsc_scaffold_488                       177346   7 +    436027 I
e Cavia_porcellus.DS562889.1                             15799155   7 -  24440124 I
e Cavia_aperea.AVPZ01000278.1                            15787219   7 -  24422027 I
e Castor_canadensis.CasCan_scaffold_47037                   31693   0 +     33760 C
e Carlito_syrichta.NW_007248099.1                          309614   0 +    345090 C
e Cacajao_melanocephalus.k141_1160263                        8221   0 -    134917 C
e Cacajao_hosomi.k141_303789                                15678   0 -    216513 C
e Cacajao_calvus.k141_96166                                 13635   0 +    125063 C
e Cacajao_ayresi.k141_724503                               114606   0 -    171031 C
e Avahi_peyrierasi.k141_798820                               1105   3 +      6337 I
e Avahi_laniger.k141_2840928                                 7489   3 -     16375 I
e Ateles_paniscus.k141_1631200                               6719   0 -     25888 C
e Ateles_marginatus.k141_899112                             64748   0 +    119057 C
e Ateles_geoffroyi_a.k141_1300742                             16756   0 -     58268 C
e Ateles_chamek.k141_1072810                                12253   0 +     89302 C
e Ateles_belzebuth.k141_1348307                             61240   0 +     85812 C
e Ateles_geoffroyi_b.tarseq_2582                             9539969   0 +  39197703 C
e Arctocebus_calabarensis.k141_587554                        1753   3 +      9265 I
e Aotus_vociferans.k141_718647                               6700   0 +     23246 C
e Aotus_trivirgatus.k141_1740727                             6698   0 -    104377 C
e Aotus_nancymaae.KZ196176.1                              5750109   0 +   9889416 C
e Aotus_griseimembra.k141_3275623                            6152   0 +     22701 C
e Aotus_azarae.k141_3170768                                 63210   0 +     78111 C
e Alouatta_seniculus.k141_1531728                             715   0 -      1692 C
e Alouatta_puruensis.k141_1284840                            4580   0 -      4927 C
e Alouatta_palliata.k141_2764429                              500   0 -      1480 C
e Alouatta_nigerrima.k141_3537692                             587   0 +      1660 C
e Alouatta_macconnelli.k141_2177643                           538   0 -      1868 C
e Alouatta_juara.k141_1244470                                1154   0 +      2129 C
e Alouatta_discolor.k141_811576                             11531   0 -     21359 C
e Alouatta_caraya.k141_1710068                                575   0 +      1555 C
e Alouatta_belzebul.k141_1818029                            10858   0 -     18050 C
e Allochrocebus_solatus.k141_371672                          2558   0 -     80423 C
e Allochrocebus_preussi.k141_1108977                         1599   0 +     38766 C
e Allochrocebus_lhoesti.k141_3566948                         2664   0 -     29318 C
e Allenopithecus_nigroviridis.k141_2469532                   1944   0 -     60446 C
e Acomys_cahirinus.AcoCah_scaffold_1625                    113328   0 -    189883 C
e Nomascus_siki_b.tarseq_80                             25604   0 -  18771707 C
e Nomascus_annamensis.k141_720788                             582   0 -      1065 C
e Symphalangus_syndactylus.tarseq_24                        15589   0 -  13920577 C
e Pongo_pygmaeus.ctg62                                   19808481   0 +  19899266 C
e Pongo_abelii.NDHI03003816.1                              187833   0 -    373494 C
e Nomascus_gabriellae.k141_1004198                            453   0 +      1448 C
e Nomascus_concolor.k141_226614                              1886  62 -      5092 I
e Hoolock_leuconedys.ctg79                                      5634  36 -   7690867 I
e Pan_paniscus.AJFE02002911.1                                1338   0 +      1338 I
e Gorilla_gorilla.LT578340.1                            119653047   0 - 195582420 C
e Gorilla_beringei.k141_111300                               5947   0 -     14630 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               13655 334 +    209709 aaggtgtaaggaagggatccagtttcagctttctacatatggcttgccagttttcccagcaccatttattaaatagggaatcctttccctagttcttgtttttgtcaggtttctcaaagatcagatagttgtagatatgcggcattatttctgagggctctgttccattccattggcctctatctctcttttggtacaagtaccatgctcttttggtcactgtagccttgtagtatagtttgaagtcaggtagcgtcgtacctccagctttgttcttttggcttaggattgacttggcaatgcaggctcttttttggttccatatgaactttaa
s Pan_troglodytes.NBAG03000771.1                           181705 333 +    210065 aaggtgtaaggaagggatccagtttcagctttctacatatggctagccagttttcccagcaccatttattaaatagggaatcctttccc-agttcttgtttttgtcagatttctcaaagatcagataattgtagatatgcggcattatttctgaggactctgttccattccattggcctctatctctcttttggtaccagtaccatgctcttttggtcactgtagccttgtagtatagtttgaagtcaggtagcgtcgtacctccagctttgttcttttggcttaggattgacttggcaatgcaggctcttttttggttccatatgaactttaa
i Pan_troglodytes.NBAG03000771.1                        C 0 I 3005
e Eptesicus_fuscus.JH977687.1                             4707522   0 +   6522550 C
e Macroglossus_sobrinus.MacSob_scaffold_879                701732  90 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             39414   7 -     47444 I
e Petromus_typicus.PetTyp_scaffold_33007                    14204   7 -     36578 I
e Sorex_araneus.JH798170.1                               17767035   0 -  27805282 C
e Dinomys_branickii.DinBra_scaffold_1996                   157576   7 +    228994 I
e Erinaceus_europaeus.JH835290.1                         11534833   0 +  16010500 C
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           3336   1 -      6963 I
e Aplodontia_rufa.AprRuf_scaffold_156013                     4248   0 +      5067 C
e Oryctolagus_cuniculus.CM000803.1                      141876891   0 + 163896628 C
e Ochotona_princeps.JH802095.1                            4996611   7 -  23139505 I
e Lepus_americanus.LepAme_scaffold_62849                    13854   0 +     22452 C
e Perognathus_longimembris.PerPac_flattened_line_19359        624   0 +     49596 C
e Dipodomys_stephensi.DipSte_scaffold_44365                 28586   0 +     28912 C
e Dipodomys_ordii.KN672545.1                              3656943   0 +   4240102 C
e Suricata_suricatta.SurSur_flattened_line_20339            28154   1 +     62062 I
e Nomascus_siki_a.k141_595747                                  3307   0 +      4512 C
e Ziphius_cavirostris.ZipCav_flattened_line_127025           7494   0 -      8775 C
e Zalophus_californianus.ZalCal_flattened_line_4097        214862   1 -    227762 I
e Vulpes_lagopus.VulLag_flattened_line_2045                138881   1 -    281493 I
e Vicugna_pacos.KN269600.1                                1525243   0 -   2331223 C
e Ursus_maritimus.KK498671.1                              6515392   8 +  28682327 I
e Uropsilus_gracilis.UroGra_scaffold_69449                   1895   0 +     10241 C
e Tursiops_truncatus.MRVK01000923.1                      69313995   0 -  96451834 C
e Trichechus_manatus.JH594618.1                          16085913   0 +  31416278 C
e Tragulus_javanicus.TraJav_scaffold_14717                   5724   0 +     90398 C
e Tonatia_saurophila.TonSau_scaffold_3334                  136644   6 -    259118 I
e Tolypeutes_matacus.TolMat_scaffold_269431                  6072   1 +      6782 I
e Tapirus_terrestris.TapTer_scaffold_14939                  58413   1 +     99546 I
e Tapirus_indicus.TapInd_scaffold_176                      807701   1 +   1148477 I
e Tamandua_tetradactyla.TamTet_scaffold_26877               15268   0 +     45698 C
e Tadarida_brasiliensis.TadBra_scaffold_61492                 852   0 +     20549 C
e Sus_scrofa.CM000824.4                                 189272673   0 + 218635234 C
e Spilogale_gracilis.SpiGra_flattened_line_905             235391   1 -    276980 I
e Solenodon_paradoxus.SolPar_flattened_line_1012            19459   0 +    739146 C
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   32854   0 -    114521 C
e Saiga_tatarica.SaiTat_scaffold_82192                       8520   0 +     12214 C
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                19896   1 +    109198 I
e Rhinolophus_sinicus.LVEH01000179.1                      1788428   1 +   2252614 I
e Rangifer_tarandus.RanTarSib_scaffold_24239                16363   0 +     68503 C
e Puma_concolor.QAVW01000427.1                          131534940   9 - 161321710 I
e Pteropus_vampyrus.KN525959.1                             604516  10 -   3946241 I
e Pteropus_alecto.KB031157.1                             13246565  10 -  17261082 I
e Pteronura_brasiliensis.PteBra_flattened_line_1343        247267   1 -    344369 I
e Pteronotus_parnellii.KE867983.1                            4652   0 -     27784 C
e Procavia_capensis.ProCapCap_scaffold_149274                2467 1156 -      9567 I
e Platanista_gangetica.PlaMin_flattened_line_72990           5970   0 +     21690 C
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Phocoena_phocoena.PhoPho_flattened_line_11948            121883   0 -    122454 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    116381   1 -    135482 I
e Pantholops_hodgsonii.KE114631.1                         1066695   0 -   1292953 C
e Panthera_tigris.KE721879.1                              5028343   1 -   6340057 I
e Panthera_pardus.KV860323.1                              3638668   1 +  18214204 I
e Panthera_onca.PanOnc_flattened_line_1615                  34918   1 +    295523 I
e Ovis_canadensis.OviCan_scaffold_6251                      79060   0 +    140051 C
e Ovis_aries.CM001582.2                                 134077845   0 - 275406953 C
e Otocyon_megalotis.JAEUCK010005121.1                      308785   1 -    505867 I
e Orycteropus_afer.OryAfe_flattened_line_13509              60523   0 -     66828 C
e Orcinus_orca.KB316965.1                                 7225279   0 -   7562323 C
e Okapia_johnstoni.LVCL01S0017931.1                         37567   0 +     78940 C
e Odocoileus_virginianus.KZ101650.1                       1080249   0 +   1425656 C
e Odobenus_rosmarus.KB229369.1                             680135   1 -   3126709 I
e Nyctereutes_procyonoides.CAJHUB010000786.1                31501   1 +   3668941 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214  77 +     94413 I
e Neophocaena_asiaeorientalis.KZ688543.1                  3951594   0 -   4490290 C
e Neomonachus_schauinslandi.NINY01007774.1                4485468   1 -  14209539 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             5602   0 -      8794 C
e Myotis_myotis.MyoMyo_scaffold_6123                        12374   0 +     66751 C
e Myotis_lucifugus.GL429887.1                             3467131   0 -   3747815 C
e Myotis_davidii.KB114863.1                               5021053   0 +   6462685 C
e Myotis_brandtii.KE161952.1                               969629   0 +   8389877 C
e Mustela_putorius.JH417978.1                             4424956   1 -  28371801 I
e Murina_feae.MurFea_scaffold_2254                          22011   0 -    100666 C
e Mungos_mungo.MunMun_flattened_line_8729                  145494   1 -    168139 I
e Moschus_moschiferus.MosMos_scaffold_78805                  2069   0 -     19904 C
e Mormoops_blainvillei.MorMeg_scaffold_2952                162013   0 +    265003 C
e Monodon_monoceros.MonMon_M_scaffold_5598                 146982   0 +    154973 C
e Mirounga_angustirostris.MirAng_flattened_line_8852        12078   1 -    104932 I
e Miniopterus_schreibersii.MinSch_scaffold_24116            35151   0 +     45743 C
e Miniopterus_natalensis.LDJU01000022.1                   8210662   0 +  10048721 C
e Micronycteris_hirsuta.MicHir_scaffold_37978               23489   0 -     32043 C
e Microgale_talazaci.MicTal_scaffold_34660                  35502   0 -     48017 C
e Mesoplodon_bidens.MesBid_scaffold_227248                    881   0 -      1377 C
e Mellivora_capensis.MelCap_flattened_line_15433             1588   1 -     87323 I
e Megaderma_lyra.MegLyr_scaffold_3562                       64783 239 -    234502 I
e Manis_pentadactyla.KN017078.1                             36789   1 +     58827 I
e Manis_javanica.JSZB01003966.1                            146646   1 +    252755 I
e Lycaon_pictus.CM007556.1                               11088700   1 +  39895028 I
e Loxodonta_africana.GL010040.1                          20595391   0 -  62548349 C
e Lipotes_vexillifer.KE558548.1                            136554   0 +   3060487 C
e Leptonychotes_weddellii.KB714749.1                      3086562   1 -   3498232 I
e Lasiurus_borealis.LasBor_scaffold_59542                    4357   0 +     26176 C
e Kogia_breviceps.KogBre_flattened_line_35920               24204   0 +     37189 C
e Inia_geoffrensis.IniGeo_flattened_line_66725               9597   0 +     17520 C
e Hyaena_hyaena.HyaHya_flattened_line_20729                 17876   1 -     67322 I
e Hipposideros_galeritus.HipGal_scaffold_104691              8126   1 -      9143 I
e Hipposideros_armiger.JXIK01001085.1                      278976   1 -    477199 I
e Hippopotamus_amphibius.HipAmp_scaffold_1308              147697   0 +    277961 C
e Heterohyrax_brucei.HetBruBak_scaffold_25354               61360 1157 +     73687 I
e Hemitragus_hylocrius.HemHyl_scaffold_16669                28054   0 -     91191 C
e Helogale_parvula.HelPar_flattened_line_22962              17799   1 +     53719 I
e Giraffa_tippelskirchi.LVKQ01S012154.1                    181839   0 -    189561 C
e Felis_nigripes.FelNig_flattened_line_8080                 21776   9 +     52776 I
e Felis_catus_fca126.CM031420.1                         129280636   9 - 158578461 I
e Eubalaena_japonica.EubJap_flattened_line_7756             62061   0 +     89355 C
e Eschrichtius_robustus.EscRob_flattened_line_685          315608   0 +    330699 C
e Equus_przewalskii.ATBW01073585.1                          13549   1 +     92910 I
e Equus_caballus.CM000402.2                              13352060   1 +  41866177 I
e Equus_asinus.JREZ01000062.1                             5853555   1 -   7175178 I
e Enhydra_lutris.KZ291749.1                              85872776   1 +  99434291 I
e Elephantulus_edwardii.JH947210.1                        7816992 12417 +  15467074 I
e Elaphurus_davidianus.JRFZ01086400.1                     1492034   0 +   1727528 C
e Eidolon_helvum.KE772537.1                                 12831   1 +     24177 I
e Echinops_telfairi.JH980316.1                           22999510   0 -  44670279 C
e Diceros_bicornis.DicBicMic_scaffold_9545                   3767   1 +    151128 I
e Dicerorhinus_sumatrensis.PEKH010003161.1                 323115   1 +    993696 I
e Desmodus_rotundus.KZ672188.1                           18699583   0 -  18957592 C
e Delphinapterus_leucas.KZ290064.1                       80037392   0 -  96802777 C
e Dasypus_novemcinctus.JH568778.1                          184212   1 -   6883506 I
e Cryptoprocta_ferox.CryFer_flattened_line_19014            52601   1 -     70449 I
e Crocidura_indochinensis.CroInd_scaffold_848148              199   0 +      1327 C
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1008 325 -      5782 I
e Condylura_cristata.JH655880.1                          60614172   0 +  78930452 C
e Choloepus_hoffmanni.KN194586.1                           762343   0 +    964067 C
e Choloepus_didactylus.ChoDid_scaffold_36182                17038   0 -     21363 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_160623         4220   1 -      9338 I
e Catagonus_wagneri.CatWag_scaffold_1305                   159453   0 -    276539 C
e Carollia_perspicillata.CarPer_scaffold_4436               60300   0 +     67245 C
e Capra_hircus.CM004562.1                               135706997   0 - 157403528 C
e Capra_aegagrus.CM003214.1                              21325769   0 + 157394656 C
e Canis_lupus_orion.HG994411.1                           16456259   1 -  44759192 I
e Canis_lupus_familiaris.chr31                           11089244   1 +  39895921 I
e Canis_lupus_dingo.QKWQ01001993.1                       11266710   1 -  35597290 I
e Canis_lupus_VD.CanFam_VD_scaffold_16982                   15069   1 +     87036 I
e CanFam4.chr31                                          11520043   1 +  39901454 I
e Camelus_ferus.KB016973.1                                2973576   0 +   6889770 C
e Camelus_dromedarius.KN271192.1                           397840   0 -  15254737 C
e Camelus_bactrianus.KN276303.1                           3220139   0 -   8989139 C
e Bubalus_bubalis.KI419065.1                              1233348   0 -   1914593 C
e Bos_taurus.CM000177.6                                 136296268   0 - 158972876 C
e Bos_mutus.JH883513.1                                     573076   0 -    998990 C
e Bos_indicus.CM003021.1                                138140535   0 - 161108492 C
e Bison_bison.KN264915.1                                  6560420   0 +   6870073 C
e Beatragus_hunteri.BeaHun_scaffold_21644                   43804   0 -     72089 C
e Balaenoptera_bonaerensis.DF502048.1                        5940   0 -     13118 C
e Balaenoptera_acutorostrata.KI537095.1                  26380768   0 +  51448160 C
e Artibeus_jamaicensis.ArtJam_scaffold_41619                 9513   0 -     29036 C
e Antilocapra_americana.AntAmePen_scaffold_42841            31276   0 +     33004 C
e Anoura_caudifer.AnoCau_scaffold_422                      391097   0 -    631301 C
e Ammotragus_lervia.NIVO01013474.1                        3520694   0 +   4113121 C
e Ailurus_fulgens.LNAC01000003.1                          7095252   1 -  16596857 I
e Ailuropoda_melanoleuca.LNAT01000321.1                  10657900   1 +  23371972 I
e Acinonyx_jubatus.LLWD01000356.1                         2034585   9 +   3721120 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19574   7 -    119109 I
e Glis_glis.GliGli_scaffold_79770                           14338   0 -     18683 C
e Zapus_hudsonius.ZapHud_scaffold_64392                     16410   0 -     20485 C
e Jaculus_jaculus.JH725517.1                              8566514   0 +  11848649 C
e Hylobates_pileatus_a.tarseq_592                             34487   0 -     60944 C
e Hylobates_pileatus_b.ContigUN                                 14625328   0 -  25970782 C
e Allactaga_bullata.AllBul_scaffold_70162                   17500   0 -     22067 C
e Hylobates_muelleri.k141_1389047                            2584   0 -      2977 C
e Hylobates_klossii.k141_285563                               343 193 +      1026 I
e Hylobates_agilis.k141_1878600                               675   0 -      1230 C
e Hylobates_abbotti.k141_164775                               422   0 -      2073 C
e Galeopterus_variegatus.GalVar_scaffold_354               156881   0 +    324696 C
e Microtus_ochrogaster.CM001673.1                        22820341   4 -  98408828 I
e Xerus_inauris.XerIna_scaffold_7898                       127465   0 -    134049 C
e Varecia_variegata.k141_775891                             25501   3 -     33872 I
e Varecia_rubra.k141_432109                                  5966   3 -     20643 I
e Tupaia_tana.TupTan_flattened_line_68454                    5880   0 +     13056 C
e Tupaia_chinensis.KB320831.1                             2793694   0 -   3938065 C
e Trachypithecus_pileatus.k141_1022309                       3155   0 +     13828 C
e Trachypithecus_phayrei.ctg3                            44660847   0 -  44834318 C
e Trachypithecus_obscurus.k141_1115109                       6047   0 -     28054 C
e Trachypithecus_melamera.k141_699241                         801   0 -     24393 C
e Trachypithecus_leucocephalus.k141_381681                    925   0 +     12481 C
e Trachypithecus_laotum.k141_760702                          2644   0 +     14371 C
e Trachypithecus_hatinhensis.k141_504423                     3988   0 -     15592 C
e Trachypithecus_germaini.k141_868450                        1811   0 -     11566 C
e Trachypithecus_geei.k141_670367                           44008   0 -     54611 C
e Trachypithecus_francoisi.k141_768164                       2609   0 -     14244 C
e Trachypithecus_cristatus.k141_1011511                      2673   0 -     12939 C
e Trachypithecus_crepusculus.k141_1588528                   21287   0 -     32910 C
e Trachypithecus_auratus.k141_738098                        27555   0 +     38948 C
e Theropithecus_gelada.CM009951.1                       194008453   0 - 194193292 C
e Tarsius_wallacei.k141_48636                               60382   0 +     65473 C
e Tarsius_lariang.k141_609102                               27066   0 +     42269 C
e Spermophilus_dauricus.KZ294190.1                        2240350   0 +   2842873 C
e Sigmodon_hispidus.SigHis_scaffold_11332                  100847   0 -    120886 C
e Semnopithecus_vetulus.k141_1143185                        14399   0 +     30600 C
e Semnopithecus_schistaceus.k141_387461                     31359   0 +     42640 C
e Semnopithecus_priam.k141_410937                           38239   0 +     46263 C
e Semnopithecus_johnii.k141_785014                         119453   0 +    130994 C
e Semnopithecus_hypoleucos.k141_761524                       9450   0 +     20762 C
e Semnopithecus_entellus.k141_1572367                        4057   0 +     15331 C
e Sapajus_macrocephalus.k141_966464                         21354   0 -     62485 C
e Sapajus_apella.ctg10                                   17341993   0 -  30362882 C
e Saimiri_ustus.k141_1282476                                 5266   0 -     76454 C
e Saimiri_sciureus.k141_1947592                              5329   0 +     60816 C
e Saimiri_oerstedii.k141_841116                              5351   0 +     67014 C
e Saimiri_macrodon.k141_2087127                              5258   0 -     60842 C
e Saimiri_cassiquiarensis.k141_808270                        5316   0 +     34089 C
e Saimiri_boliviensis.NW_024100938.1                     15673403   0 -  43202129 C
e Rhinopithecus_strykeri.ctg4                            44857245   0 -  45163003 C
e Rhinopithecus_roxellana.NC_044549.1                   206378331   0 - 206558726 C
e Rhinopithecus_bieti.k119_554384                             854   0 -     17045 C
e Rattus_norvegicus.chr11                                13915860 1475 +  90463843 I
e Pygathrix_nigripes_a.k141_101123                             6444   0 +     18040 C
e Pygathrix_nigripes_b.ctg79                                 6807053   0 +   6970761 C
e Pygathrix_cinerea.k141_374971                             30565   0 +     56732 C
e Psammomys_obesus.NESX01026517.1                           36055   0 +     77221 C
e Propithecus_verreauxi.k141_158021                         39953   3 -     48185 I
e Propithecus_tattersalli.k141_907138                       17689   3 -     53241 I
e Propithecus_perrieri.k141_7554                            18055   3 +     27322 I
e Propithecus_edwardsi.k141_1317105                         36132   3 -     44753 I
e Propithecus_diadema.k141_577245                           43745   3 +     52369 I
e Propithecus_coronatus.k141_1353159                         4402   3 +     11805 I
e Propithecus_coquerelli.NW_012147863.1                     19492   3 -     30946 I
e Prolemur_simus.MPIZ01000048.1                           6849325   3 +  12164890 I
e Presbytis_mitrata.k141_860013                              6574   0 +     14865 C
e Presbytis_comata.k141_672698                               6444   0 -     15069 C
e Plecturocebus_moloch.k141_890597                          23981   0 -     75465 C
e Plecturocebus_miltoni.k141_841561                         13394   0 +    134592 C
e Plecturocebus_hoffmannsi.k141_985533                       1388   0 -    119457 C
e Plecturocebus_grovesi.k141_242819                         23671   0 +    152463 C
e Plecturocebus_dubius.k141_3565563                          4317   0 -     55515 C
e Plecturocebus_cupreus.k141_1145860                          234   0 -     43940 C
e Plecturocebus_cinerascens.k141_744510                     23598   0 +    147771 C
e Plecturocebus_caligatus.k141_2539816                      13998   0 -     98129 C
e Plecturocebus_brunneus.k141_498086                        23758   0 +     67491 C
e Plecturocebus_bernhardi.k141_959214                       23546   0 +     44506 C
e Pithecia_vanzolinii.k141_831006                           14206   0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13475303   0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          6303   0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        13075   0 -     16101 C
e Pithecia_hirsuta.k141_1152968                              9876   0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        25829   0 +     78826 C
e Pithecia_albicans.k141_991845                             44444   0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000036.1               26741183   0 +  26888534 C
e Piliocolobus_kirkii.k141_929665                            2705   0 +      7694 C
e Piliocolobus_gordonorum.k141_1270531                       3338   0 -     17985 C
e Piliocolobus_badius.k141_1987485                           2714   0 -      5908 C
e Peromyscus_maniculatus.KI615518.1                       4950911   0 -   8017169 C
e Perodicticus_potto.k141_713187                            25474   3 -     27972 I
e Perodicticus_ibeanus.k141_117958                           6160   3 -     23713 I
e Papio_ursinus.k141_1345919                                 2687   0 -      7628 C
e Papio_papio.k141_979496                                    6828   0 +     14967 C
e Papio_kindae.k141_5458022                                 68292   0 -    104429 C
e Papio_hamadryas.Contig15                               47514316   0 +  47705337 C
e Papio_cynocephalus.k141_883042                             5248   0 +      5367 C
e Papio_anubis.CM001492.2                               188156931   0 - 188283584 C
e Otolemur_garnettii.GL873528.1                          18009456   3 -  38779656 I
e Otolemur_crassicaudatus.k141_505435                        1475   3 -     53940 I
e Onychomys_torridus.OnyTor_scaffold_12578                  37664   0 +     62360 C
e Ondatra_zibethicus.OndZib_scaffold_6821                  125594   4 +    145789 I
e Octodon_degus.JH651621.1                                3686473   7 +  10294119 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65670190   0 +  89412551 C
e Nycticebus_coucang.k141_2051882                            4581   0 +      6470 C
e Nycticebus_bengalensis.LG16                            65567855   0 -  95554990 C
e Nasalis_larvatus.k141_153429                               9200   0 +     48152 C
e Nannospalax_galili.KL201303.1                            119159   6 +    362372 I
e Myocastor_coypus.MyoCoy_scaffold_3653                     90979   7 -    117718 I
e Muscardinus_avellanarius.MusAve_scaffold_9643             12843   0 +     98495 C
e Mus_spretus.CM004110.1                                 74333118   0 +  97876770 C
e Mus_pahari.LT608305.1                                  67556586   0 +  89017189 C
e Mus_musculus.chr16                                     75490383   0 +  98207768 C
e Mus_caroli.LT608236.1                                  70767307  11 +  92629107 I
e Mirza_zaza.k141_226143                                     6369   3 +      8497 I
e Miopithecus_ogouensis.k141_2935907                         2693   0 +     29742 C
e Microcebus_murinus.CM007691.1                          16510980   3 +  47401472 I
e Mesocricetus_auratus.KB708139.1                         1047473   0 -  26018355 C
e Meriones_unguiculatus.MerUng_scaffold_52233               13773   0 +     15977 C
e Marmota_marmota.CZRN01000005.1                         36874253   0 +  64221397 C
e Mandrillus_sphinx.Contig144                             4450964   0 -   4543643 C
e Mandrillus_leucophaeus.scaffold125                     43438144   0 -  43563597 C
e Macaca_tonkeana.k141_2870633                               5095   0 -     27140 C
e Macaca_thibetana.k99_662710                               17729   0 -     24607 C
e Macaca_silenus.Contig12                                43841559   0 +  43892939 C
e Macaca_siberu.k141_741907                                 16443   0 -     55006 C
e Macaca_radiata.k141_3680256                                2764   0 -     13212 C
e Macaca_nigra.k141_282495                                   5090   0 -     46448 C
e Macaca_nemestrina.KQ004885.1                           11446420   0 +  11645122 C
e Macaca_mulatta.NC_041755.1                            196036250   0 + 196197964 C
e Macaca_maura.k141_251854                                  46143   0 -     79256 C
e Macaca_leonina.k141_467472                                 2926   0 -      7381 C
e Macaca_fuscata.k119_599327                                 2341   0 -      2568 C
e Macaca_fascicularis.k141_155037                           47633   0 +     63263 C
e Macaca_cyclopis.k119_893486                                2818   0 -      3136 C
e Macaca_assamensis.Contig65                             12707176   0 +  12821369 C
e Macaca_arctoides.k141_2201161                             20719   0 +     74745 C
e Loris_tardigradus.ctg97                                 3779150   0 +   6799190 C
e Loris_lydekkerianus.k141_550999                           11401   0 +     84689 C
e Lophocebus_aterrimus.ctg55                             19248984   0 +  19376315 C
e Lepilemur_septentrionalis.k141_578524                     32347   3 -     33031 I
e Lepilemur_ruficaudatus.k141_617879                        79356   3 +    116806 I
e Lepilemur_dorsalis.k141_134267                            54094   3 +     63517 I
e Lepilemur_ankaranensis.k141_884009                        24708   3 +     39228 I
e Lemur_catta.scaffold_1                                258407958   3 - 285822530 I
e Lagothrix_lagothricha.k141_12968                          50838   0 -    147782 C
e Indri_indri.k141_5141390                                   1122   3 -      3181 I
e Ictidomys_tridecemlineatus.JH393315.1                   7126434   0 +  13083262 C
e Hystrix_cristata.HysCri_scaffold_50788                     6738   7 +     22540 I
e Heterocephalus_glaber.JH602058.1                        2551672   7 +  31725842 I
e Hapalemur_occidentalis.k141_797938                        46279   3 -     54384 I
e Hapalemur_meridionalis.k141_186231                        29651   3 -     42470 I
e Hapalemur_griseus.k141_1387522                             6402   3 +     56096 I
e Hapalemur_gilberti.k141_279011                             1076   3 -     11661 I
e Hapalemur_alaotrensis.k141_1280836                         2596   3 +     10286 I
e Graphiurus_murinus.GraMur_scaffold_4493                   77863   0 +    118900 C
e Galagoides_demidoff.k141_1769638                          11100   3 +     27357 I
e Galago_senegalensis.k141_964197                           14034   3 -     43889 I
e Galago_moholi.ctg555                                     211660   3 -    847004 I
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I
e Eulemur_sanfordi.k141_186399                              16595   3 -     29447 I
e Eulemur_rufus.k141_1620292                                33869   3 +     46535 I
e Eulemur_rubriventer.k141_411740                           19131   3 +     26808 I
e Eulemur_mongoz.k141_825972                                16675   3 +     27497 I
e Eulemur_fulvus.k141_653297                                12015   3 +    109717 I
e Eulemur_flavifrons.k141_903901                             8537   3 +     60246 I
e Eulemur_coronatus.k141_3240342                            12216   3 +     36558 I
e Eulemur_collaris.k141_311830                               5742   3 -      6809 I
e Eulemur_albifrons.k141_715837                              5810   3 +     13586 I
e Erythrocebus_patas.Contig8                             48776228   0 -  48907691 C
e Ellobius_talpinus.LOJH01090055.1                           7151   4 -      7838 I
e Ellobius_lutescens.LOEQ01003611.1                        240029   1 -    369425 I
e Dolichotis_patagonum.DolPat_scaffold_14102                36665   7 -     73477 I
e Daubentonia_madagascariensis.ctg11                     16845635   3 +  31942871 I
e Dasyprocta_punctata.DasPun_flattened_line_634             59439   7 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                18349   7 +     26546 I
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 31653   8 -     67205 I
e Ctenodactylus_gundi.CteGun_scaffold_447                  209008   0 -    956709 C
e Cricetulus_griseus.LT883672.1                          53029787   0 +  72327488 C
e Cricetomys_gambianus.CriGam_scaffold_949                 279115   0 -    399297 C
e Colobus_polykomos.k141_1406057                            17260   0 +     23629 C
e Colobus_guereza.LG08                                  147665275   0 + 156195979 C
e Colobus_angolensis.KN985967.1                          10887110   0 +  10971483 C
e Chlorocebus_sabaeus.CM001963.2                        101145346   0 + 101219884 C
e Chlorocebus_pygerythrus.k141_1486215                      34793   0 -     53260 C
e Chlorocebus_aethiops.ctg22                             15140178   0 -  15256731 C
e Chiropotes_sagulatus.k141_773804                          15987   0 +     40510 C
e Chiropotes_israelita.k141_1189915                         71807   0 +    196370 C
e Chinchilla_lanigera.JH721867.1                         15962308   7 +  43084221 I
e Cheracebus_torquatus.k141_315545                          47000   0 +     54541 C
e Cheracebus_regulus.k141_2128895                           42321   0 +     57117 C
e Cheracebus_lugens.k141_203936                             23281   0 +     25473 C
e Cheracebus_lucifer.k141_619653                             6263   0 -     18223 C
e Cheirogaleus_medius.k141_133808                            8812   3 +     13308 I
e Cheirogaleus_major.k141_1157592                           59764   3 -     68416 I
e Cercopithecus_roloway.k141_2263608                        22185   0 +     37128 C
e Cercopithecus_pogonias.k141_3109732                        2568   0 -     17744 C
e Cercopithecus_petaurista.k141_64532                        2590   0 -     25661 C
e Cercopithecus_nictitans.k141_1129315                       2815   0 +     35577 C
e Cercopithecus_neglectus.k141_2078027                      41809   0 -     45581 C
e Cercopithecus_mona.ctg12                               46478259   0 +  46592721 C
e Cercopithecus_albogularis.ctg51                              11991499   0 +  12117833 C
e Cercopithecus_lowei.k141_623764                           24973   0 +     35983 C
e Cercopithecus_hamlyni.k141_129805                          2814   0 +     16677 C
e Cercopithecus_diana.k141_2157192                             14   0 +     26591 C
e Cercopithecus_cephus.k141_598190                          30268   0 +     30494 C
e Cercopithecus_ascanius.k141_4123525                        2772   0 -     17608 C
e Cercocebus_torquatus.k141_3969582                         59882   0 -    107033 C
e Cercocebus_lunulatus.k141_4634644                          2573   0 -     21101 C
e Cercocebus_chrysogaster.k141_2328246                      27367   0 +     60454 C
e Cercocebus_atys.KQ010443.1                              6555890   0 +   6739814 C
e Cephalopachus_bancanus.k141_702587                         8638   0 +     21754 C
e Cebus_unicolor.k141_239009                                13235   0 +     25043 C
e Cebus_olivaceus.k141_93739                                 8992   0 -     26817 C
e Cebus_albifrons.Contig22                               18891448   0 -  29618158 C
e Cavia_tschudii.CavTsc_scaffold_488                       177346   7 +    436027 I
e Cavia_porcellus.DS562889.1                             15799155   7 -  24440124 I
e Cavia_aperea.AVPZ01000278.1                            15787219   7 -  24422027 I
e Castor_canadensis.CasCan_scaffold_47037                   31693   0 +     33760 C
e Carlito_syrichta.NW_007248099.1                          309614   0 +    345090 C
e Cacajao_melanocephalus.k141_1160263                        8221   0 -    134917 C
e Cacajao_hosomi.k141_303789                                15678   0 -    216513 C
e Cacajao_calvus.k141_96166                                 13635   0 +    125063 C
e Cacajao_ayresi.k141_724503                               114606   0 -    171031 C
e Avahi_peyrierasi.k141_798820                               1105   3 +      6337 I
e Avahi_laniger.k141_2840928                                 7489   3 -     16375 I
e Ateles_paniscus.k141_1631200                               6719   0 -     25888 C
e Ateles_marginatus.k141_899112                             64748   0 +    119057 C
e Ateles_geoffroyi_a.k141_1300742                             16756   0 -     58268 C
e Ateles_chamek.k141_1072810                                12253   0 +     89302 C
e Ateles_belzebuth.k141_1348307                             61240   0 +     85812 C
e Ateles_geoffroyi_b.tarseq_2582                             9539969   0 +  39197703 C
e Arctocebus_calabarensis.k141_587554                        1753   3 +      9265 I
e Aotus_vociferans.k141_718647                               6700   0 +     23246 C
e Aotus_trivirgatus.k141_1740727                             6698   0 -    104377 C
e Aotus_nancymaae.KZ196176.1                              5750109   0 +   9889416 C
e Aotus_griseimembra.k141_3275623                            6152   0 +     22701 C
e Aotus_azarae.k141_3170768                                 63210   0 +     78111 C
e Alouatta_seniculus.k141_1531728                             715   0 -      1692 C
e Alouatta_puruensis.k141_1284840                            4580   0 -      4927 C
e Alouatta_palliata.k141_2764429                              500   0 -      1480 C
e Alouatta_nigerrima.k141_3537692                             587   0 +      1660 C
e Alouatta_macconnelli.k141_2177643                           538   0 -      1868 C
e Alouatta_juara.k141_1244470                                1154   0 +      2129 C
e Alouatta_discolor.k141_811576                             11531   0 -     21359 C
e Alouatta_caraya.k141_1710068                                575   0 +      1555 C
e Alouatta_belzebul.k141_1818029                            10858   0 -     18050 C
e Allochrocebus_solatus.k141_371672                          2558   0 -     80423 C
e Allochrocebus_preussi.k141_1108977                         1599   0 +     38766 C
e Allochrocebus_lhoesti.k141_3566948                         2664   0 -     29318 C
e Allenopithecus_nigroviridis.k141_2469532                   1944   0 -     60446 C
e Acomys_cahirinus.AcoCah_scaffold_1625                    113328   0 -    189883 C
e Nomascus_siki_b.tarseq_80                             25604   0 -  18771707 C
e Nomascus_annamensis.k141_720788                             582   0 -      1065 C
e Symphalangus_syndactylus.tarseq_24                        15589   0 -  13920577 C
e Pongo_pygmaeus.ctg62                                   19808481   0 +  19899266 C
e Pongo_abelii.NDHI03003816.1                              187833   0 -    373494 C
e Nomascus_gabriellae.k141_1004198                            453   0 +      1448 C
e Nomascus_concolor.k141_226614                              1886  62 -      5092 I
e Hoolock_leuconedys.ctg79                                      5634  36 -   7690867 I
e Pan_paniscus.AJFE02002911.1                                1338   0 +      1338 I
e Gorilla_gorilla.LT578340.1                            119653047   0 - 195582420 C
e Gorilla_beringei.k141_111300                               5947   0 -     14630 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               13989 288 +    209709 agtagttttttccaattctgtgaagacagtcattggtagcttgatggggatggcattgaatctataaattaccttgggcagtatggccatttttacaatattgattcttcctacccatgagcatggaagtttcttacatttgtttgtatcttcttttatttcattgagcagtggtttgtagctctccttgaagaggtccttcacatcccttgtaagttggatttctaggtattttattctctttgaggcaattgagaTCC--T-T--------------ATTG-TG-----A-GAT-TCAATTCAGAATCTGG
s Acinonyx_jubatus.LLWD01000356.1                         2034594  17 +   3721120 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------t--------------tttc-ta-----a-aat-tccatT----------
i Acinonyx_jubatus.LLWD01000356.1                       I 9 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    113328  26 -    189883 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATAC--T-TA--T------------CC-TG-----A-GAC-TCAGTC----------
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 I 2
s Ailuropoda_melanoleuca.LNAT01000321.1                  10657901  26 +  23371972 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATAT--T-T--------------ATTC-TG-----A-AAT-TCAGTT----------
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 1 C 0
s Ailurus_fulgens.LNAC01000003.1                          7095253  26 -  16596857 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATAT--T-T--------------ATTC-TG-----A-ATT-TCAGTT----------
i Ailurus_fulgens.LNAC01000003.1                        I 1 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   17500  25 -     22067 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATAG--T-TA--T------------TC-TG-----A-GAC-T-AATT----------
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   1944  36 -     60446 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATTTGG
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         2664  36 -     29318 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATCC--T-T--------------ATTC-TG-----A-GAC-TCAGTTCAGAATTTGG
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         1599  36 +     38766 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATCC--T-T--------------ATTC-TG-----A-GAC-TCAGTTCAGAATTTGG
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          2558  36 -     80423 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATCC--T-T--------------ATTC-TA-----A-GAC-TCAGTTCAGAATTTGG
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            10858  26 -     18050 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATTC--T-T--------------ATTC-TG-----A-GAT-TCAGTT----------
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_1710068                                575  26 +      1555 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATTC--T-T--------------ATTC-TG-----A-GAC-TCAGTT----------
i Alouatta_caraya.k141_1710068                          C 0 C 0
s Alouatta_discolor.k141_811576                             11531  26 -     21359 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATTC--T-T--------------ATTC-TG-----A-GAT-TCAGTT----------
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                1154  26 +      2129 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATTC--T-T--------------ATTC-TG-----A-GAC-TCAGTT----------
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_2177643                           538  26 -      1868 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATTC--T-T--------------ATTC-TG-----A-GAC-TCAGTT----------
i Alouatta_macconnelli.k141_2177643                     C 0 C 0
s Alouatta_nigerrima.k141_3537692                             587  26 +      1660 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATTC--T-T--------------ATTC-TG-----A-GAC-TCAGTT----------
i Alouatta_nigerrima.k141_3537692                       C 0 C 0
s Alouatta_palliata.k141_2764429                              500  26 -      1480 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATTC--T-T--------------ATTC-TG-----A-GAT-TCAATT----------
i Alouatta_palliata.k141_2764429                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            4580  26 -      4927 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATTC--T-T--------------ATTC-TG-----A-GAC-TCAGTT----------
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_1531728                             715  26 -      1692 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATTC--T-T--------------ATTC-TG-----A-GAT-TCAGTT----------
i Alouatta_seniculus.k141_1531728                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3520694  26 +   4113121 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGACAC--T-C--------------ATTC-TG-----A-AAT-TCAGTT----------
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      391097  22 -    631301 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGA--TATT-T---T----------TTTC-TG-----A-AAT-T---------------
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            31276  26 +     33004 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGACAT--T-C--------------ATTC-TG-----A-TAT-TCAGTT----------
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 63210  26 +     78111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATTC--T-T--------------ATTC-TG-----A-GAT-TCACTT----------
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            6152  26 +     22701 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATTC--T-T--------------ATTC-TG-----A-GAT-TCACTT----------
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5750109  26 +   9889416 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATTC--T-T--------------ATTC-TG-----A-GAT-TCACTT----------
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             6698  26 -    104377 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATTC--T-T--------------ATTC-TG-----A-GAT-TCACTT----------
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               6700  26 +     23246 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATTC--T-T--------------ATTC-TG-----A-GAT-TCACTT----------
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     4248  10 +      5067 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATAT--T-T------------------------------------------------
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 I 12
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 9513  26 -     29036 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGA--TAAT-T--------------TTTC-TG-----A-AAT-TCAGTT----------
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9539969  26 +  39197703 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATTC--T-T--------------ATTC-TG-----A-GAT-TCAGTT----------
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             61240  26 +     85812 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATTC--T-T--------------ATTC-TG-----A-GAT-TCAGTT----------
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                12253  26 +     89302 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATTC--T-T--------------ATTC-TG-----A-GAT-TCAGTT----------
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             16756  26 -     58268 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATTC--T-T--------------ATTC-TG-----A-GAT-TCAGTT----------
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             64748  26 +    119057 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATTC--T-T--------------ATTC-TG-----A-GAT-TCAGTT----------
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               6719  26 -     25888 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATTC--T-T--------------ATTC-TG-----A-GAT-TCAGTT----------
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26380768  26 +  51448160 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATAC--T-T--------------ATTC-TG-----A-AAT-TCAGTT----------
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        5940  26 -     13118 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATAC--T-T--------------ATTC-TG-----A-AAT-TCAGTT----------
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   43804  26 -     72089 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATAC--T-C--------------ATTC-TG-----A-AAT-TCAGTT----------
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6560420  26 +   6870073 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGACAT--T-C--------------ATTC-TG-----A-AAT-TCAGTT----------
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138140535  26 - 161108492 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGACAT--T-C--------------ATTC-TG-----A-AAT-TCAGTT----------
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     573076  26 -    998990 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGACAT--T-C--------------ATTC-TG-----A-AAT-TCAGTT----------
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136296268  26 - 158972876 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGACAT--T-C--------------ATTC-TG-----A-AAT-TCAGTT----------
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1233348  26 -   1914593 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGACAC--T-C--------------ATTC-TG-----A-AAT-TCAGTT----------
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               114606  26 -    171031 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATTC--T-T--------------ATTC-TG-----A-GGT-TCAGTT----------
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 13635  26 +    125063 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATTC--T-T--------------ATTC-TG-----A-GGT-TCAGTT----------
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                15678  26 -    216513 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATTC--T-T--------------ATTC-TG-----A-GGT-TCAGTT----------
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        8221  26 -    134917 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATTC--T-T--------------ATTC-TG-----A-GGT-TCAGTT----------
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3220139  26 -   8989139 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------tcagatgC--T-T--------------ACCC-TG-----A-AAT-TCAGTT----------
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           397840  26 -  15254737 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------tcagatgC--T-T--------------ACCC-TG-----A-AAT-TCAGTT----------
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2973576  26 +   6889770 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------tcagatgC--T-T--------------ACCC-TG-----A-AAT-TCAGTT----------
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11520044  26 +  39901454 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGTAT--T-T--------------ATTC-TG-----A-AAT-TCAGTT----------
i CanFam4.chr31                                         I 1 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   15070  26 +     87036 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGTAT--T-T--------------ATTC-TG-----A-AAT-TCAGTT----------
i Canis_lupus_VD.CanFam_VD_scaffold_16982               I 1 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11266711  26 -  35597290 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGTAT--T-T--------------ATTC-TG-----A-AAT-TCAGTT----------
i Canis_lupus_dingo.QKWQ01001993.1                      I 1 C 0
s Canis_lupus_familiaris.chr31                           11089245  26 +  39895921 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGTAT--T-T--------------ATTC-TG-----A-AAT-TCAGTT----------
i Canis_lupus_familiaris.chr31                          I 1 C 0
s Canis_lupus_orion.HG994411.1                           16456260  26 -  44759192 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGTAT--T-T--------------ATTC-TG-----A-AAT-TCAGTT----------
i Canis_lupus_orion.HG994411.1                          I 1 C 0
s Capra_aegagrus.CM003214.1                              21325769  26 + 157394656 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGACAC--T-C--------------ATTC-TG-----A-AAT-TCAGTT----------
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135706997  26 - 157403528 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGACAC--T-C--------------ATTC-TG-----A-AAT-TCAGTT----------
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          309614  26 +    345090 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATAC--T-T--------------GTTC-TG-----A-AAT-TCAGTT----------
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               60300  26 +     67245 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGA--TATT-T--------------TTTC-TG-----A-AAT-TCAGTT----------
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   31693  24 +     33760 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGACACAC--T-T----------------AT-TA-----A-GGC-ACATTT----------
i Castor_canadensis.CasCan_scaffold_47037               C 0 I 7
s Catagonus_wagneri.CatWag_scaffold_1305                   159453  26 -    276539 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAGACAC--T-T--------------ATTG-CA-----A-AAT-TCTCTT----------
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15787226  15 -  24422027 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C----------------TT-GG-----A-GTC-TCAGTT----------
i Cavia_aperea.AVPZ01000278.1                           I 7 C 0
s Cavia_porcellus.DS562889.1                             15799162  15 -  24440124 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C----------------TT-GG-----A-GTC-TCAGTT----------
i Cavia_porcellus.DS562889.1                            I 7 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       177353  15 +    436027 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C----------------TT-GG-----A-GTC-TCAGTT----------
i Cavia_tschudii.CavTsc_scaffold_488                    I 7 C 0
s Cebus_albifrons.Contig22                               18891448  26 -  29618158 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGAGATTC--T-T--------------ATTC-TG-----A-GAT-TCAGTT----------
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 8992  26 -     26817 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGAGATTC--T-T--------------ATTC-TG-----A-GAT-TCAGTT----------
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                13235  26 +     25043 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGAGATTC--T-T--------------ATTC-TG-----A-GAT-TCAGTT----------
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         8638  26 +     21754 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATAC--T-T--------------GTTC-TG-----A-GAT-TCAGTT----------
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4364464  26 +   7569818 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGACAC--T-T--------------ATTC-TG-----A-AGT-TCAGTT----------
i Ceratotherium_simum.JH767818.1                        I 1 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         4221  26 -      9338 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGACAC--T-T--------------ATTC-TG-----A-AGT-TCAGTT----------
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    I 1 C 0
s Cercocebus_atys.KQ010443.1                              6555890  36 +   6739814 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAgaatttgg
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      27367  36 +     60454 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATTTGG
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          2573  36 -     21101 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATTTGG
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         59882  36 -    107033 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATTTGG
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        2772  36 -     17608 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATTTGG
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_598190                          30268  36 +     30494 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATTTGG
i Cercopithecus_cephus.k141_598190                      C 0 C 0
s Cercopithecus_diana.k141_2157192                             14  36 +     26591 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATCT--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATTTGG
i Cercopithecus_diana.k141_2157192                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          2814  36 +     16677 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATCT--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATTTGG
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           24973  36 +     35983 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATTTGG
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11991499  36 +  12117833 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATCT--T-T--------------ATTC-TG-----A-GAT-TCGGTTCAGAATTTGG
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46478259  36 +  46592721 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATTTGG
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      41809  36 -     45581 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATTTGG
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       2815  36 +     35577 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATCT--T-T--------------ATTC-TG-----A-GAT-TCGGTTCAGAATTTGG
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        2590  36 -     25661 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATCT--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATTTGG
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        2568  36 -     17744 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATTTGG
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        22185  36 +     37128 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATCT--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATTTGG
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           3337  27 -      6963 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGATAA--T-T--------------ATCC-TG-----A-AATTTTAGTT----------
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      I 1 C 0
s Cheracebus_lucifer.k141_619653                             6263  26 -     18223 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATTT--T-T--------------ATTC-TG-----A-GAT-TCACTT----------
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             23281  26 +     25473 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATTT--T-T--------------ATTC-TG-----A-GAT-TCACTT----------
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           42321  26 +     57117 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATTT--T-T--------------ATTC-TG-----A-GAT-TCACTT----------
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          47000  26 +     54541 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATTT--T-T--------------ATTC-TG-----A-GAT-TCACTT----------
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15962315  16 +  43084221 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C----------------TCTTG-----A-GAC-TCATTT----------
i Chinchilla_lanigera.JH721867.1                        I 7 C 0
s Chiropotes_israelita.k141_1189915                         71807  26 +    196370 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATTC--T-T--------------ATTC-TG-----A-GGT-TCAGTT----------
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          15987  26 +     40510 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATTC--T-T--------------ATTC-TG-----A-GGT-TCAGTT----------
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15140178  36 -  15256731 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATTTGG
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      34793  36 -     53260 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATTTGG
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101145346  36 + 101219884 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAgaatttgg
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                17038  26 -     21363 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGTAT--T-T--------------ATCC-TG-----A-AAT-TCAGTT----------
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           762343  26 +    964067 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGTAT--T-T--------------ATCC-TG-----A-AAT-TCAGTT----------
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10887110  36 +  10971483 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGTCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTAagaatttgg
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147665275  36 + 156195979 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGTCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTAAGAATTTGG
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            17260  36 +     23629 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGTCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATTTGG
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60614172  26 +  78930452 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATAC--T-T--------------ATTC-TG-----A-AAT-TCAGGT----------
i Condylura_cristata.JH655880.1                         C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 279115  38 -    399297 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATAT--T-TAAATATTCATtttt--tt-ca-----a-gac-ggggtt----------
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53029787  25 +  72327488 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATAC--T-TA--T------------C--TA-----A-GAC-TCAGTT----------
i Cricetulus_griseus.LT883672.1                         C 0 I 13
s Cryptoprocta_ferox.CryFer_flattened_line_19014            52602  26 -     70449 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGATAT--T-T--------------ATTC-TA-----A-AAT-TCAGTT----------
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 1 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  209008  23 -    956709 -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAGATAT--T-T----------------TC-TG-----A-GAC-TAACTT----------
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 31661  15 -     67205 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C----------------TC-TG-----A-GAC-TCAATT----------
i Ctenomys_sociabilis.CteSoc_scaffold_19489             I 8 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                18356  14 +     26546 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C----------------TC-TG-----A-GAC-TCAGT-----------
i Cuniculus_paca.CunPac_flattened_line_16637            I 7 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             59446  15 -    236241 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C----------------TC-TA-----A-GAC-TCAGTT----------
i Dasyprocta_punctata.DasPun_flattened_line_634         I 7 C 0
s Dasypus_novemcinctus.JH568778.1                          184213  26 -   6883506 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGATAA--T-G--------------ATCC-TG-----A-AAT-TTAGTT----------
i Dasypus_novemcinctus.JH568778.1                       I 1 C 0
s Delphinapterus_leucas.KZ290064.1                       80037392  26 -  96802777 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATAC--T-T--------------ATTC-TG-----A-AAT-TCAGTT----------
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18699583  28 -  18957592 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGatataat-t--------------tttc-tg-----a-aat-tcagtt----------
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 323116  26 +    993696 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGACAC--T-T--------------ATTC-TG-----A-AGT-TCAGTT----------
i Dicerorhinus_sumatrensis.PEKH010003161.1              I 1 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   3768  26 +    151128 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGACAC--T-T--------------ATTC-TG-----A-AGT-TCAGTT----------
i Diceros_bicornis.DicBicMic_scaffold_9545              I 1 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   157583  15 +    228994 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C----------------TC-TG-----A-GAC-TCAGTT----------
i Dinomys_branickii.DinBra_scaffold_1996                I 7 C 0
s Dipodomys_ordii.KN672545.1                              3656943  24 +   4240102 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGAGAAAC--T-T----------------AC-TG-----A-GAC-AGAATT----------
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 28586  24 +     28912 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGAGAAAC--T-T----------------AC-TG-----A-GAC-AGAATT----------
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                36672  15 -     73477 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C----------------TC-AG-----A-GAC-TCAGTT----------
i Dolichotis_patagonum.DolPat_scaffold_14102            I 7 C 0
s Echinops_telfairi.JH980316.1                           22999510  26 -  44670279 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCGCTAC--T-C--------------ATCC-TA-----C-AAT-CAAACT----------
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 12832  26 +     24177 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------Tgagataa--t-t--------------tttc-tg-----a-aat-tcagtt----------
i Eidolon_helvum.KE772537.1                             I 1 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1492034  26 +   1727528 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGACAC--T-C--------------ATTC-TG-----A-AAT-TCAGTT----------
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Enhydra_lutris.KZ291749.1                              85872777  26 +  99434291 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATAT--T-T--------------ATTC-TG-----A-AAT-TCAATT----------
i Enhydra_lutris.KZ291749.1                             I 1 C 0
s Eptesicus_fuscus.JH977687.1                             4707522  27 +   6522550 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------tGAGATAC--T-T---T----------TTTC-TG-----A-AAT-TCACTT----------
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5853556  26 -   7175178 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAGATAC--T-T--------------ATTC-TG-----A-AAT-TCAGTT----------
i Equus_asinus.JREZ01000062.1                           I 1 C 0
s Equus_caballus.CM000402.2                              13352061  26 +  41866177 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAGATAC--T-T--------------ATTC-TG-----A-AAT-TCAGTT----------
i Equus_caballus.CM000402.2                             I 1 C 0
s Equus_przewalskii.ATBW01073585.1                          13550  26 +     92910 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAGATAC--T-T--------------ATTC-TG-----A-AAT-TCAGTT----------
i Equus_przewalskii.ATBW01073585.1                      I 1 C 0
s Erinaceus_europaeus.JH835290.1                         11534833  26 +  16010500 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAAATAC--T-T--------------AGTC-TG-----A-GAT-GCAGTT----------
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48776228  36 -  48907691 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATTTGG
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          315608  26 +    330699 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATAC--T-T--------------ATTC-TG-----A-AAT-TCAGTT----------
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             62061  26 +     89355 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATAC--T-T--------------ATTC-TG-----A-AAT-TCAGTT----------
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Felis_catus.CM001386.2                                129893561  17 - 159252932 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------t--------------tttc-ta-----a-aat-tccatT----------
i Felis_catus.CM001386.2                                I 9 C 0
s Felis_catus_fca126.CM031420.1                         129280645  17 - 158578461 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------t--------------tttc-ta-----a-aat-tccatT----------
i Felis_catus_fca126.CM031420.1                         I 9 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 21785  17 +     52776 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--------------TTTC-TA-----A-AAT-TGCATT----------
i Felis_nigripes.FelNig_flattened_line_8080             I 9 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               156881  26 +    324696 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATAC--T-T--------------ATTC-TG-----A-GAT-TTTCTT----------
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    181839  26 -    189561 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGACAC--T-C--------------ATTC-TG-----A-ACT-TCAGct----------
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           14338  26 -     18683 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATAA--T-TA--T------------TC-TG-----A-GAC-TTAGTT----------
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               5947  36 -     14630 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATCTGG
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119653047  36 - 195582420 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAatctgg
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              17800  26 +     53719 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATAC--T-A--------------ATTC-TA-----A-AAG-TCAGTT----------
i Helogale_parvula.HelPar_flattened_line_22962          I 1 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                28054  26 -     91191 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGACAC--T-C--------------ATTC-TG-----A-AAT-TCAGTT----------
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2551679  15 +  31725842 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C----------------TC-TG-----A-GAC-ACAGTT----------
i Heterocephalus_glaber.JH602058.1                      I 7 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              147697  26 +    277961 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATAC--T-T--------------ACTC-TG-----A-AAT-TCAGTT----------
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      278977  27 -    477199 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGAtac--t-t----------t---tttc-tg-----a-aat-tcagtt----------
i Hipposideros_armiger.JXIK01001085.1                   I 1 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              8127  27 -      9143 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATAC--T-T---T----------TTTC-TG-----A-AAT-TCAGTT----------
i Hipposideros_galeritus.HipGal_scaffold_104691         I 1 I 325
s Hoolock_leuconedys.ctg1392                                   14470  38 +     14997 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATCC--T-T---T-T--------ATTC-TG-----A-GAT-TCAGTTCAGAATCTGA
i Hoolock_leuconedys.ctg1392                               n 36 n 36
s Hyaena_hyaena.HyaHya_flattened_line_20729                 17877  16 -     67322 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGGGATAT--T-T--------------ATTC-TA---------------------------
i Hyaena_hyaena.HyaHya_flattened_line_20729             I 1 I 9
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19581  15 -    119109 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T----------------TC-AG-----A-GAC-ACAGTT----------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       I 7 C 0
s Hylobates_abbotti.k141_164775                               422  36 -      2073 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATCTGA
i Hylobates_abbotti.k141_164775                         C 0 C 0
s Hylobates_agilis.k141_1878600                               675  36 -      1230 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATCTGA
i Hylobates_agilis.k141_1878600                         C 0 C 0
s Hylobates_klossii.k141_183401                                 0  11 -      1272 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGAATCTGA
i Hylobates_klossii.k141_183401                         n 193 C 0
s Hylobates_pileatus_b.ContigUN                                 14625328  36 -  25970782 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATCTGA
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            2584  36 -      2977 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATCTGA
i Hylobates_muelleri.k141_1389047                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             34487  36 -     60944 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATCC--T-T--------------ATTC-TG-----A-GAC-TCAGTTCAGAATCTGA
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     6745  13 +     22540 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C----------------TT-TA-----A-G---TCAGTT----------
i Hystrix_cristata.HysCri_scaffold_50788                I 7 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7126434  15 +  13083262 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGA--T--T-TA--T------------TC-TG-----A---------------------
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 I 5
s Inia_geoffrensis.IniGeo_flattened_line_66725               9597  26 +     17520 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATAT--T-T--------------ATTC-TG-----A-AAT-TCAGTT----------
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8566514  25 +  11848649 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGATAC--T-TA--T------------TC-TG-----A-GAC-T-AATT----------
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               24204  26 +     37189 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATAC--T-T--------------ATTC-CG-----A-AAT-TCAGTT----------
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          50838  26 -    147782 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATTC--T-T--------------ATTC-TG-----A-GAT-TCAGTT----------
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    4357  27 +     26176 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATGATAC--T-T---T----------TTTC-TG-----A-AAT-TCAGTT----------
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3086563  26 -   3498232 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATAT--T-T--------------ATTC-TG-----A-AAT-TCAGTT----------
i Leptonychotes_weddellii.KB714749.1                    I 1 C 0
s Lepus_americanus.LepAme_scaffold_62849                    13854  26 +     22452 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGTAT--T-T--------------ACCC-TA-----A-TAT-TAAGTT----------
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            136554  26 +   3060487 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATAC--T-T--------------ATTC-TG-----A-AAT-TCAGTT----------
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19248984  36 +  19376315 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATTTGG
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loxodonta_africana.GL010040.1                          20595391  26 -  62548349 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAACTAT--T-T--------------ATCC-TG-----A-AAT-TAAATT----------
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11088701  26 +  39895028 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGTAT--T-T--------------ATTC-TG-----A-AAT-TCAGTT----------
i Lycaon_pictus.CM007556.1                              I 1 C 0
s Macaca_arctoides.k141_2201161                             20719  36 +     74745 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATTTGG
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12707176  36 +  12821369 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATTTGG
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                2818  36 -      3136 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATTTGG
i Macaca_cyclopis.k119_893486                           C 0 C 0
s Macaca_fascicularis.k141_155037                           47633  36 +     63263 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATTTGG
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_599327                                 2341  36 -      2568 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATTTGG
i Macaca_fuscata.k119_599327                            C 0 C 0
s Macaca_leonina.k141_467472                                 2926  36 -      7381 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATTTGG
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  46143  36 -     79256 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATTTGG
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196036250  36 + 196197964 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAgaatttgg
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11446420  36 +  11645122 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAgaatttgg
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   5090  36 -     46448 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATTTGG
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                2764  36 -     13212 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATTTGG
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 16443  36 -     55006 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATTTGG
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43841559  36 +  43892939 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATTTGG
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               17729  36 -     24607 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATTTGG
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               5095  36 -     27140 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATTTGG
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43438144  36 -  43563597 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATTTGG
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4450964  36 -   4543643 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATTTGG
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            146647  26 +    252755 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGAAAC--T-T--------------ACCC-TG-----A-Aat-tcattt----------
i Manis_javanica.JSZB01003966.1                         I 1 C 0
s Manis_pentadactyla.KN017078.1                             36790  26 +     58827 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGAAAC--T-T--------------ATCC-TG-----A-AAT-TCATTT----------
i Manis_pentadactyla.KN017078.1                         I 1 C 0
s Marmota_marmota.CZRN01000005.1                         36874253  15 +  64221397 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGA--T--T-TA--T------------TC-TG-----A---------------------
i Marmota_marmota.CZRN01000005.1                        C 0 I 5
s Mellivora_capensis.MelCap_flattened_line_15433             1589  26 -     87323 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATAT--T-T--------------ATTC-TG-----A-AAT-TCAGTT----------
i Mellivora_capensis.MelCap_flattened_line_15433        I 1 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               13773  26 +     15977 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------caagacaC--T-TA--T------------CT-GG-----A-GAT-TCAGTT----------
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 I 2
s Mesocricetus_auratus.KB708139.1                         1047473  26 -  26018355 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAAATAC--T-TA--T-T----------C--TA-----A-GAC-TAAGTT----------
i Mesocricetus_auratus.KB708139.1                       C 0 I 8
s Mesoplodon_bidens.MesBid_scaffold_227248                    881  26 -      1377 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAAATAC--T-T--------------ATTC-TG-----A-AAT-TCAGTT----------
i Mesoplodon_bidens.MesBid_scaffold_227248              C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  35502  26 -     48017 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGTTAC--T-C--------------ATCC-CG-----C-AAT-CAAATG----------
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               23489  26 -     32043 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGA--TAAT-T--------------ATTC-TG-----A-AAT-TCAGTT----------
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8210662  26 +  10048721 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAGaaac--t-t--------------tttc-tg-----a-aat-tcagtt----------
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            35151  26 +     45743 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAGAAAC--T-T--------------TTTC-TG-----A-AAT-TCAGTT----------
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         2693  36 +     29742 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATTTGG
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        12079  26 -    104932 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATAT--T-T--------------ATTC-TG-----A-AAT-TCAGTT----------
i Mirounga_angustirostris.MirAng_flattened_line_8852    I 1 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 146982  26 +    154973 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATAC--T-T--------------ATTC-TG-----A-AAT-TCAGTT----------
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                162013  26 +    265003 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGA--TAAT-T--------------TTTC-TG-----A-AAT-TCAGTT----------
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  2069  26 -     19904 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGACAC--T-C--------------ATTC-TG-----A-AAT-TCAGTT----------
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  145495  26 -    168139 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAGACAC--T-T--------------ATTC-TA-----A-AAT-TCAGTT----------
i Mungos_mungo.MunMun_flattened_line_8729               I 1 C 0
s Murina_feae.MurFea_scaffold_2254                          22011  27 -    100666 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATAC--T-T---T----------TTTC-TG-----A-AAT-TCAGTT----------
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70767318  20 +  92629107 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ta-ggtctgtatgat-tcagct----------
i Mus_caroli.LT608236.1                                 I 11 C 0
s Mus_musculus.chr16                                     75490383  32 +  98207768 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ccaaagac--t-t----------tt----ta-ggtctgtatgat-tcagct----------
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67556586  32 +  89017189 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ccaaagac--a-t----------tt----tt-gttctgtatgac-tcagct----------
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74333118  32 +  97876770 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ccaaagac--t-t---------ct-----ta-ggtctgtatgat-tcagct----------
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             12843  26 +     98495 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATAC--T-TA--T------------TC-TG-----A-TAC-TTAGAT----------
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4424957  26 -  28371801 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATAT--T-T--------------ATTC-TG-----A-AAT-TCAGTT----------
i Mustela_putorius.JH417978.1                           I 1 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     90986  15 -    117718 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C----------------AC-TG-----A-GAC-TCAGTT----------
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 7 C 0
s Myotis_brandtii.KE161952.1                               969629  27 +   8389877 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------taagATAC--T-T---T----------TTTC-TG-----A-AAT-TCAGTT----------
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5021053  27 +   6462685 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------taagGTAC--T-T---T----------TTTC-TG-----A-AAT-TCAGTT----------
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3467131  27 -   3747815 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------taagatac--t-t----------t---tttc-tg-----a-aat-tcagtt----------
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        12374  27 +     66751 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAAGGTAC--T-T---T----------TTTC-TG-----A-AAT-TCAGTT----------
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             5602  26 -      8794 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATAT--T-T--------------ATCC-TG-----A-AAT-TCAGTT----------
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nasalis_larvatus.k141_153429                               9200  36 +     48152 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGTCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATATGG
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4485469  26 -  14209539 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATAT--T-T--------------ATTC-TG-----A-AAT-TCAGTT----------
i Neomonachus_schauinslandi.NINY01007774.1              I 1 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3951594  26 -   4490290 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATAC--T-T--------------ATTC-TG-----A-AAT-TCAGTT----------
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Nomascus_annamensis.k141_720788                             582  36 -      1065 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATCTGA
i Nomascus_annamensis.k141_720788                       C 0 C 0
s Nomascus_concolor.k141_581629                               145  36 -      6578 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATCTGA
i Nomascus_concolor.k141_581629                         I 7 C 0
s Nomascus_gabriellae.k141_1004198                            453  36 +      1448 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATCCGA
i Nomascus_gabriellae.k141_1004198                      C 0 C 0
s Nomascus_siki_b.tarseq_80                             25604  36 -  18771707 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATCC--T-T--------------ATTC-TG-----A-GAT-TCAGttcagaatctga
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  3307  36 +      4512 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATCTGA
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                31502  26 +   3668941 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGTAT--T-T--------------ATTC-TG-----A-AAT-TCAGTT----------
i Nyctereutes_procyonoides.CAJHUB010000786.1            I 1 C 0
s Ochotona_princeps.JH802095.1                            4996618  16 -  23139505 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T--------------AACA-TA-----A-C-T-TTTGTT----------
i Ochotona_princeps.JH802095.1                          I 7 C 0
s Octodon_degus.JH651621.1                                3686480  15 +  10294119 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C----------------TC-TG-----A-GAC-TCAAAT----------
i Octodon_degus.JH651621.1                              I 7 C 0
s Odobenus_rosmarus.KB229369.1                             680136  26 -   3126709 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATAT--T-T--------------ATTC-TC-----A-AAT-TCAGTT----------
i Odobenus_rosmarus.KB229369.1                          I 1 C 0
s Odocoileus_virginianus.KZ101650.1                       1080249  26 +   1425656 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGACAC--T-C--------------ATTC-TG-----A-AAT-TCAGTT----------
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         37567  26 +     78940 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGACAC--T-C--------------ATTC-TG-----A-AAT-TCAGtt----------
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  37664  26 +     62360 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGAAAC--T-TA--T------------CC-TA-----A-GAC-TCAGTT----------
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 I 6
s Orcinus_orca.KB316965.1                                 7225279  26 -   7562323 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCGATAC--T-T--------------ATTC-TG-----A-AAT-TCAGTT----------
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              60523  26 -     66828 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGCTAC--T-T--------------ATCT-TG-----A-AAT-TAAATT----------
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141876891  26 + 163896628 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGTAT--T-T--------------ACCC-TA-----C-TAT-TCAGTT----------
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      308786  26 -    505867 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGTAT--T-T--------------ATTC-TG-----A-AAT-TCAGTT----------
i Otocyon_megalotis.JAEUCK010005121.1                   I 1 C 0
s Ovis_aries.CM001582.2                                 134077845  26 - 275406953 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGACAC--T-C--------------ATTC-TG-----A-AAT-TCAGTT----------
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      79060  26 +    140051 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGACAC--T-C--------------ATTC-TG-----A-AAT-TCAGTT----------
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127575307  42 - 205426864 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTCTTTGAGATAC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAatctgg
i Pan_paniscus.CM003386.1                               I 1 C 0
s Pan_troglodytes.NBAG03004582.1                                0 288 +      4638 agtagatttttccaattctgggaagaaagtcattagtagcttgatggggatggcattgaatctataaataaccttgggcagtatggccatttttacaatattgattcttcctacccatgagcatggaaggttcttacatttgtttgtatcttcttttatttcattgagcagtggtttgtagttctccttgaagaggtccttcacatcccttgtaagttggatttctaggtattttattctctttgaggcAATTGAGATCC--T-T--------------ATTG-TG-----A-GAT-TCAATTCAGAAtctgg
i Pan_troglodytes.NBAG03004582.1                        n 3005 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  34919  26 +    295523 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGTTTT--T-T--------------TTTC-TA-----A-AAT-TCCATT----------
i Panthera_onca.PanOnc_flattened_line_1615              I 1 C 0
s Panthera_pardus.KV860323.1                              3638669  26 +  18214204 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------tgagtttt--t-t--------------tttc-ta-----a-aat-tccatT----------
i Panthera_pardus.KV860323.1                            I 1 C 0
s Panthera_tigris.KE721879.1                              5028344  27 -   6340057 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------tgagtttt--ttt--------------tttc-ta-----a-aat-tccatT----------
i Panthera_tigris.KE721879.1                            I 1 C 0
s Pantholops_hodgsonii.KE114631.1                         1066695  26 -   1292953 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGACAC--T-C--------------ATTC-TG-----A-AAT-TCAGTT----------
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188156931  36 - 188283584 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAgaatttgg
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_883042                             5248  36 +      5367 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATTTGG
i Papio_cynocephalus.k141_883042                        C 0 C 0
s Papio_hamadryas.Contig15                               47514316  36 +  47705337 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATTTGG
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 68292  36 -    104429 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATTTGG
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    6828  36 +     14967 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATTTGG
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 2687  36 -      7628 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATTTGG
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    116382  26 -    135482 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATAT--T-T--------------ATTC-TG-----A-AAT-TCAGTT----------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 I 1 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359        624  17 +     49596 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGAAAAAC--T-T----------------AC-TG-----A-GA------------------
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 I 5
s Peromyscus_maniculatus.KI615518.1                       4950911  26 -   8017169 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAAAAAC--T-TA--T------------CC-TA-----A-GAC-TCAGTT----------
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    14211  15 -     36578 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C----------------TC-TG-----A-GAC-TCAGTT----------
i Petromus_typicus.PetTyp_scaffold_33007                I 7 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            121883  26 -    122454 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATAC--T-T--------------ATTC-TG-----A-AAT-TCAGTT----------
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1987485                           2714  36 -      5908 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGTCC--T-T--------------ATTC-TG-----A-AAT-TCAGTTCAGAATTTGG
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       3338  36 -     17985 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGTCC--T-T--------------ATTC-TG-----A-AAT-TCAGTTCAGAATTTGG
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            2705  36 +      7694 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGTCC--T-T--------------ATTC-TG-----A-AAT-TCAGTTCAGAATTTGG
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26741183  36 +  26888534 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGTCC--T-T--------------ATTC-TG-----A-AAT-TCAGTTCagaatttgg
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pithecia_albicans.k141_991845                             44444  26 -     61926 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATTC--T-T--------------ATTC-TG-----A-GGT-TCAGTT----------
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        25829  26 +     78826 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATTC--T-T--------------ATTC-TG-----A-GGT-TCAGTT----------
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              9876  26 -     15800 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATTC--T-T--------------ATTC-TG-----A-GGT-TCAGTT----------
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        13075  26 -     16101 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATTC--T-T--------------ATTC-TG-----A-GGT-TCAGTT----------
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          6303  26 +      9673 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATTC--T-T--------------ATTC-TG-----A-GGT-TCAGTT----------
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13475303  26 -  19735023 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATTC--T-T--------------ATTC-TG-----A-GGT-TCAGTT----------
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           14206  26 -     31692 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATTC--T-T--------------ATTC-TG-----A-GGT-TCAGTT----------
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           5970  26 +     21690 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATAC--T-T--------------ATTC-TG-----A-AAT-TCAGTT----------
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       23546  26 +     44506 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATTT--T-T--------------ATTC-TG-----A-GAT-TCAGTT----------
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        23758  26 +     67491 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATTT--T-T--------------ATTC-TG-----A-GAT-TCAGTT----------
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      13998  26 -     98129 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATTT--T-T--------------ACTC-TG-----A-GAT-TCAGTT----------
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     23598  26 +    147771 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATTT--T-T--------------ATTC-TG-----A-GAT-TCAGTT----------
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                          234  26 -     43940 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATTT--T-T--------------ATTC-TG-----A-GAT-TCAGTT----------
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          4317  26 -     55515 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATTT--T-T--------------ATTC-TG-----A-GAT-TCAGTT----------
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         23671  26 +    152463 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATTT--T-T--------------ATTC-TG-----A-GAT-TCAGTT----------
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       1388  26 -    119457 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATTT--T-T--------------ATTC-TG-----A-GAT-TCAGTT----------
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         13394  26 +    134592 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATTT--T-T--------------ATTC-TG-----A-GAT-TCAGTT----------
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          23981  26 -     75465 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATTT--T-T--------------ATTC-TG-----A-GAT-TCAGTT----------
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              187833  36 -    373494 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAatctgg
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19808481  36 +  19899266 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATCTGG
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               6444  36 -     15069 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGTCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATATGC
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              6574  36 +     14865 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGTCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATATGG
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Psammomys_obesus.NESX01026517.1                           36055  26 +     77221 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------caAGACAC--T-TA--T------------CT-GG-----A-GAT-TCAGTT----------
i Psammomys_obesus.NESX01026517.1                       C 0 I 2
s Pteronotus_parnellii.KE867983.1                            4652  26 -     27784 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAGA--TAAT-T--------------TTTC-AG-----A-AAC-TCAGTT----------
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        247268  26 -    344369 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATAT--T-T--------------TGTC-TG-----A-AAT-TCAGTT----------
i Pteronura_brasiliensis.PteBra_flattened_line_1343     I 1 C 0
s Pteropus_alecto.KB031157.1                             13246575  15 -  17261082 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTC-TG-----A-AAT-TCAGTT----------
i Pteropus_alecto.KB031157.1                            I 10 C 0
s Pteropus_vampyrus.KN525959.1                             604526  15 -   3946241 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTC-TG-----A-AAT-TCAGTT----------
i Pteropus_vampyrus.KN525959.1                          I 10 C 0
s Puma_concolor.QAVW01000427.1                          131534949  17 - 161321710 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------t--------------tttc-ta-----a-aat-tccatT----------
i Puma_concolor.QAVW01000427.1                          I 9 C 0
s Pygathrix_cinerea.k141_374971                             30565  36 +     56732 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGTCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATATGG
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6807053  36 +   6970761 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGTCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATATGG
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             6444  36 +     18040 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGTCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATATGG
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                16363  26 +     68503 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGACAC--T-C--------------ATTC-TG-----A-AAT-TCAGTT----------
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1788429  29 +   2252614 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------tgaaatac--t-t----------ttt-tttc-tg-----a-aat-tcagtt----------
i Rhinolophus_sinicus.LVEH01000179.1                    I 1 C 0
s Rhinopithecus_bieti.k119_554384                             854  36 -     17045 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGTCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATATGG
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206378331  36 - 206558726 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGTCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATAtgg
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44857245  36 -  45163003 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGTCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATATGG
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                19897  26 +    109198 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATAA--C-T--------------TTTC-TG-----A-AAT-TCAGTT----------
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            I 1 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       8520  26 +     12214 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGACAC--T-C--------------ATTC-TG-----A-AAT-TCAGTT----------
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15673403  26 -  43202129 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATTC--T-T--------------ATTC-TG-----A-GAT-TCAGTT----------
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        5316  26 +     34089 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATTC--T-T--------------ATTC-TG-----A-GAT-TCAGTT----------
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              5258  26 -     60842 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATTC--T-T--------------ATTC-TG-----A-GAT-TCAGTT----------
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              5351  26 +     67014 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATTC--T-T--------------ATTC-TG-----A-GAT-TCAGTT----------
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              5329  26 +     60816 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATTC--T-T--------------ATTC-TG-----A-GAT-TCAGTT----------
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 5266  26 -     76454 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATTC--T-T--------------ATTC-TG-----A-GAT-TCAGTT----------
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17341993  26 -  30362882 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGAGATTC--T-T--------------ATTC-TG-----A-GAT-TCAGTT----------
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         21354  26 -     62485 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGAGATTC--T-T--------------ATTC-TG-----A-GAT-TCAGTT----------
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   32854  26 -    114521 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATAT--T-T--------------ATTC-TG-----A-AAT-TCAGGT----------
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        4057  36 +     15331 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGTCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATATGG
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       9450  36 +     20762 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGTCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATATGG
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         119453  36 +    130994 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGTCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATATGG
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           38239  36 +     46263 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGTCC--C-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATATGG
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     31359  36 +     42640 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGTCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATATGG
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        14399  36 +     30600 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGTCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATATGG
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  100847  24 -    120886 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGATAC--T-TA--T------------CT-TA-----A-GAC-TCAG------------
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            19459  26 +    739146 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCGAAAT--T-C--------------ATTC-TG-----A-AGT-TCAGTT----------
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 I 11
s Sorex_araneus.JH798170.1                               17767035  26 -  27805282 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGagattt--t-t--------------attc-tg-----a-aat-tcaGTT----------
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2240350  15 +   2842873 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGA--T--T-TA--T------------TC-TG-----A---------------------
i Spermophilus_dauricus.KZ294190.1                      C 0 I 5
s Spilogale_gracilis.SpiGra_flattened_line_905             235392  26 -    276980 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATAT--T-T--------------ATTT-TG-----A-AAT-TCAGTT----------
i Spilogale_gracilis.SpiGra_flattened_line_905          I 1 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            28155  26 +     62062 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGACAC--T-T--------------ATTC-TA-----A-AAT-TCAGTT----------
i Suricata_suricatta.SurSur_flattened_line_20339        I 1 C 0
s Sus_scrofa.CM000824.4                                 189272673  26 + 218635234 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAAGATAC--T-T--------------TTTC-TG-----C-AAT-TCTGTG----------
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        15589  36 -  13920577 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGAGATCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATCTGA
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                 852  26 +     20549 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATGC--T-T--------------TTTC-TG-----A-AAT-TCAGTT----------
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               15268  26 +     45698 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATAT--T-T--------------ATCC-TG-----A-AAT-TCAGTT----------
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      807702  26 +   1148477 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGACAC--T-T--------------ATTC-TG-----A-AAT-TCAGTT----------
i Tapirus_indicus.TapInd_scaffold_176                   I 1 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  58414  26 +     99546 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGACAC--T-T--------------ATTC-TG-----A-AAT-TCAGTT----------
i Tapirus_terrestris.TapTer_scaffold_14939              I 1 C 0
s Tarsius_lariang.k141_609102                               27066  26 +     42269 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATAC--T-T--------------GTTC-TG-----A-GAT-TCAGTT----------
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               60382  26 +     65473 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATAC--T-T--------------GTTC-TG-----A-GAT-TCAGTT----------
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194008453  36 - 194193292 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAgaatttgg
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             39421  15 -     47444 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C----------------TC-TG-----A-GAC-TCAGTT----------
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         I 7 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  6073  27 +      6782 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCAGATAA--T-T--------------ATCC-TG-----A-AATTTTAGTT----------
i Tolypeutes_matacus.TolMat_scaffold_269431             I 1 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  136650  15 -    259118 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTC-TG-----A-AAT-TCAGTT----------
i Tonatia_saurophila.TonSau_scaffold_3334               I 6 C 0
s Trachypithecus_auratus.k141_738098                        27555  36 +     38948 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGTCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATATGG
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   21287  36 -     32910 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGTCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATATGG
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      2673  36 -     12939 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGTCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATATGG
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       2609  36 -     14244 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGTCC--T-T--------------AGTC-TG-----A-GAT-TCAGTTCAGAATATGG
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           44008  36 -     54611 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGTCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATATGG
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        1811  36 -     11566 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGTCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATATGG
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     3988  36 -     15592 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGTCC--T-T--------------ATTC-TG-----A-TAT-TCAGTTCAGAATATGG
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          2644  36 +     14371 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGTCC--T-T--------------ATTC-TG-----A-TAT-TCAGTTCAGAATATGG
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                    925  36 +     12481 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGTCC--T-T--------------AGTC-TG-----A-GAT-TCAGTTCAGAATATGG
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                         801  36 -     24393 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGTCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATATGG
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       6047  36 -     28054 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGTCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATATGG
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44660847  36 -  44834318 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGTCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATATGG
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       3155  36 +     13828 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGTCC--T-T--------------ATTC-TG-----A-GAT-TCAGTTCAGAATATGG
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   5724  26 +     90398 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATAC--T-C--------------ATTC-TG-----A-AGT-TCAGTT----------
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16085913  26 +  31416278 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGCTAC--T-T--------------ATCC-TG-----A-AAT-TAAATT----------
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2793694  26 -   3938065 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATAC--T-T--------------ATTC-TG-----A-GGT-TCAGAT----------
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    5880  26 +     13056 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATAC--T-T--------------ATTC-TG-----A-GGT-TCAGAT----------
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69313995  26 -  96451834 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATAC--T-T--------------ATTC-TG-----A-AAT-TCAGTT----------
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   1895  25 +     10241 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGACATAG--T-T--------------ATTC-TG-----A-AA--TCAGTT----------
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6515400  15 +  28682327 ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTC-TG-----A-AAT-TCAGTT----------
i Ursus_maritimus.KK498671.1                            I 8 C 0
s Vicugna_pacos.KN269600.1                                1525243  26 -   2331223 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------tcagatgC--T-T--------------ATCC-TG-----A-AAT-TCAGTT----------
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                138882  26 -    281493 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGGTAT--T-T--------------ATTC-TG-----A-AAT-TCAGTT----------
i Vulpes_lagopus.VulLag_flattened_line_2045             I 1 C 0
s Xerus_inauris.XerIna_scaffold_7898                       127465  17 -    134049 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATAT--T-TA--T------------TC-TG-----A---------------------
i Xerus_inauris.XerIna_scaffold_7898                    C 0 I 5
s Zalophus_californianus.ZalCal_flattened_line_4097        214863  26 -    227762 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATAT--T-T--------------ATTC-TC-----A-AAT-TCAGTT----------
i Zalophus_californianus.ZalCal_flattened_line_4097     I 1 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     16410  26 -     20485 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAGATAT--T-TA--T------------TC-TG-----A-GAC-TTAGTT----------
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           7494  26 -      8775 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAAATAC--T-T--------------ATTC-TG-----A-AAT-TCAGTT----------
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                701732  90 +    802869 I
e Procavia_capensis.ProCapCap_scaffold_149274                2467 1156 -      9567 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214  77 +     94413 I
e Megaderma_lyra.MegLyr_scaffold_3562                       64783 239 -    234502 I
e Heterohyrax_brucei.HetBruBak_scaffold_25354               61360 1157 +     73687 I
e Elephantulus_edwardii.JH947210.1                        7816992 12417 +  15467074 I
e Crocidura_indochinensis.CroInd_scaffold_848148              199   0 +      1327 C
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1008 325 -      5782 I
e Microtus_ochrogaster.CM001673.1                        22820341   4 -  98408828 I
e Varecia_variegata.k141_775891                             25501   3 -     33872 I
e Varecia_rubra.k141_432109                                  5966   3 -     20643 I
e Rattus_norvegicus.chr11                                13915860 1475 +  90463843 I
e Propithecus_verreauxi.k141_158021                         39953   3 -     48185 I
e Propithecus_tattersalli.k141_907138                       17689   3 -     53241 I
e Propithecus_perrieri.k141_7554                            18055   3 +     27322 I
e Propithecus_edwardsi.k141_1317105                         36132   3 -     44753 I
e Propithecus_diadema.k141_577245                           43745   3 +     52369 I
e Propithecus_coronatus.k141_1353159                         4402   3 +     11805 I
e Propithecus_coquerelli.NW_012147863.1                     19492   3 -     30946 I
e Prolemur_simus.MPIZ01000048.1                           6849325   3 +  12164890 I
e Perodicticus_potto.k141_713187                            25474   3 -     27972 I
e Perodicticus_ibeanus.k141_117958                           6160   3 -     23713 I
e Otolemur_garnettii.GL873528.1                          18009456   3 -  38779656 I
e Otolemur_crassicaudatus.k141_505435                        1475   3 -     53940 I
e Ondatra_zibethicus.OndZib_scaffold_6821                  125594   4 +    145789 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65670190   0 +  89412551 C
e Nycticebus_coucang.k141_2051882                            4581   0 +      6470 C
e Nycticebus_bengalensis.LG16                            65567855   0 -  95554990 C
e Nannospalax_galili.KL201303.1                            119159   6 +    362372 I
e Mirza_zaza.k141_226143                                     6369   3 +      8497 I
e Microcebus_murinus.CM007691.1                          16510980   3 +  47401472 I
e Loris_tardigradus.ctg97                                 3779150   0 +   6799190 C
e Loris_lydekkerianus.k141_550999                           11401   0 +     84689 C
e Lepilemur_septentrionalis.k141_578524                     32347   3 -     33031 I
e Lepilemur_ruficaudatus.k141_617879                        79356   3 +    116806 I
e Lepilemur_dorsalis.k141_134267                            54094   3 +     63517 I
e Lepilemur_ankaranensis.k141_884009                        24708   3 +     39228 I
e Lemur_catta.scaffold_1                                258407958   3 - 285822530 I
e Indri_indri.k141_5141390                                   1122   3 -      3181 I
e Hapalemur_occidentalis.k141_797938                        46279   3 -     54384 I
e Hapalemur_meridionalis.k141_186231                        29651   3 -     42470 I
e Hapalemur_griseus.k141_1387522                             6402   3 +     56096 I
e Hapalemur_gilberti.k141_279011                             1076   3 -     11661 I
e Hapalemur_alaotrensis.k141_1280836                         2596   3 +     10286 I
e Graphiurus_murinus.GraMur_scaffold_4493                   77863   0 +    118900 C
e Galagoides_demidoff.k141_1769638                          11100   3 +     27357 I
e Galago_senegalensis.k141_964197                           14034   3 -     43889 I
e Galago_moholi.ctg555                                     211660   3 -    847004 I
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I
e Eulemur_sanfordi.k141_186399                              16595   3 -     29447 I
e Eulemur_rufus.k141_1620292                                33869   3 +     46535 I
e Eulemur_rubriventer.k141_411740                           19131   3 +     26808 I
e Eulemur_mongoz.k141_825972                                16675   3 +     27497 I
e Eulemur_fulvus.k141_653297                                12015   3 +    109717 I
e Eulemur_flavifrons.k141_903901                             8537   3 +     60246 I
e Eulemur_coronatus.k141_3240342                            12216   3 +     36558 I
e Eulemur_collaris.k141_311830                               5742   3 -      6809 I
e Eulemur_albifrons.k141_715837                              5810   3 +     13586 I
e Ellobius_talpinus.LOJH01090055.1                           7151   4 -      7838 I
e Ellobius_lutescens.LOEQ01003611.1                        240029   1 -    369425 I
e Daubentonia_madagascariensis.ctg11                     16845635   3 +  31942871 I
e Cheirogaleus_medius.k141_133808                            8812   3 +     13308 I
e Cheirogaleus_major.k141_1157592                           59764   3 -     68416 I
e Avahi_peyrierasi.k141_798820                               1105   3 +      6337 I
e Avahi_laniger.k141_2840928                                 7489   3 -     16375 I
e Arctocebus_calabarensis.k141_587554                        1753   3 +      9265 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               14277 17 +    209709 Gattttgttttgttttg
s Allenopithecus_nigroviridis.k141_2469532                   1980  1 -     60446 G----------------
i Allenopithecus_nigroviridis.k141_2469532              C 0 I 33
s Allochrocebus_lhoesti.k141_3566948                         2700  1 -     29318 G----------------
i Allochrocebus_lhoesti.k141_3566948                    C 0 I 28
s Allochrocebus_preussi.k141_1108977                         1635  1 +     38766 G----------------
i Allochrocebus_preussi.k141_1108977                    C 0 I 28
s Allochrocebus_solatus.k141_371672                          2594  1 -     80423 G----------------
i Allochrocebus_solatus.k141_371672                     C 0 I 28
s Cercocebus_atys.KQ010443.1                              6555926  1 +   6739814 g----------------
i Cercocebus_atys.KQ010443.1                            C 0 I 28
s Cercocebus_chrysogaster.k141_2328246                      27403  1 +     60454 G----------------
i Cercocebus_chrysogaster.k141_2328246                  C 0 I 28
s Cercocebus_lunulatus.k141_4634644                          2609  1 -     21101 G----------------
i Cercocebus_lunulatus.k141_4634644                     C 0 I 28
s Cercocebus_torquatus.k141_3969582                         59918  1 -    107033 G----------------
i Cercocebus_torquatus.k141_3969582                     C 0 I 28
s Cercopithecus_ascanius.k141_4123525                        2808  1 -     17608 G----------------
i Cercopithecus_ascanius.k141_4123525                   C 0 I 21
s Cercopithecus_cephus.k141_598190                          30304  1 +     30494 G----------------
i Cercopithecus_cephus.k141_598190                      C 0 N 0
s Cercopithecus_diana.k141_2157192                             50  1 +     26591 G----------------
i Cercopithecus_diana.k141_2157192                      C 0 N 0
s Cercopithecus_hamlyni.k141_129805                          2850  1 +     16677 G----------------
i Cercopithecus_hamlyni.k141_129805                     C 0 I 23
s Cercopithecus_lowei.k141_623764                           25009  1 +     35983 G----------------
i Cercopithecus_lowei.k141_623764                       C 0 I 33
s Cercopithecus_albogularis.ctg51                              11991535  1 +  12117833 G----------------
i Cercopithecus_albogularis.ctg51                             C 0 I 33
s Cercopithecus_mona.ctg12                               46478295  1 +  46592721 G----------------
i Cercopithecus_mona.ctg12                              C 0 I 33
s Cercopithecus_neglectus.k141_2078027                      41845  1 -     45581 G----------------
i Cercopithecus_neglectus.k141_2078027                  C 0 I 33
s Cercopithecus_nictitans.k141_1129315                       2851  1 +     35577 G----------------
i Cercopithecus_nictitans.k141_1129315                  C 0 I 33
s Cercopithecus_petaurista.k141_64532                        2626  1 -     25661 G----------------
i Cercopithecus_petaurista.k141_64532                   C 0 I 33
s Cercopithecus_pogonias.k141_3109732                        2604  1 -     17744 G----------------
i Cercopithecus_pogonias.k141_3109732                   C 0 I 33
s Cercopithecus_roloway.k141_2263608                        22221  1 +     37128 G----------------
i Cercopithecus_roloway.k141_2263608                    C 0 I 23
s Chlorocebus_aethiops.ctg22                             15140214  1 -  15256731 G----------------
i Chlorocebus_aethiops.ctg22                            C 0 I 28
s Chlorocebus_pygerythrus.k141_1486215                      34829  1 -     53260 G----------------
i Chlorocebus_pygerythrus.k141_1486215                  C 0 I 23
s Chlorocebus_sabaeus.CM001963.2                        101145382  1 + 101219884 g----------------
i Chlorocebus_sabaeus.CM001963.2                        C 0 I 28
s Colobus_angolensis.KN985967.1                          10887146  1 +  10971483 g----------------
i Colobus_angolensis.KN985967.1                         C 0 I 16
s Colobus_guereza.LG08                                  147665311  1 + 156195979 G----------------
i Colobus_guereza.LG08                                  C 0 I 16
s Colobus_polykomos.k141_1406057                            17296  1 +     23629 G----------------
i Colobus_polykomos.k141_1406057                        C 0 I 16
s Erythrocebus_patas.Contig8                             48776264  1 -  48907691 G----------------
i Erythrocebus_patas.Contig8                            C 0 T 4216
s Gorilla_beringei.k141_111300                               5983  1 -     14630 G----------------
i Gorilla_beringei.k141_111300                          C 0 I 21
s Gorilla_gorilla.LT578340.1                            119653083  1 - 195582420 g----------------
i Gorilla_gorilla.LT578340.1                            C 0 I 21
s Hoolock_leuconedys.ctg79                                      5670  1 -   7690867 G----------------
i Hoolock_leuconedys.ctg79                                 I 36 I 184
s Hylobates_abbotti.k141_164775                               458  1 -      2073 G----------------
i Hylobates_abbotti.k141_164775                         C 0 I 21
s Hylobates_agilis.k141_1878600                               711  1 -      1230 G----------------
i Hylobates_agilis.k141_1878600                         C 0 I 21
s Hylobates_klossii.k141_183401                                11  1 -      1272 G----------------
i Hylobates_klossii.k141_183401                         C 0 I 21
s Hylobates_pileatus_b.ContigUN                                 14625364  1 -  25970782 G----------------
i Hylobates_pileatus_b.ContigUN                                C 0 I 21
s Hylobates_muelleri.k141_1389047                            2620  1 -      2977 G----------------
i Hylobates_muelleri.k141_1389047                       C 0 I 21
s Hylobates_pileatus_a.tarseq_592                             34523  1 -     60944 G----------------
i Hylobates_pileatus_a.tarseq_592                         C 0 I 21
s Lophocebus_aterrimus.ctg55                             19249020  1 +  19376315 G----------------
i Lophocebus_aterrimus.ctg55                            C 0 I 21
s Macaca_arctoides.k141_2201161                             20755  1 +     74745 G----------------
i Macaca_arctoides.k141_2201161                         C 0 I 33
s Macaca_assamensis.Contig65                             12707212  1 +  12821369 G----------------
i Macaca_assamensis.Contig65                            C 0 I 33
s Macaca_cyclopis.k119_893486                                2854  1 -      3136 G----------------
i Macaca_cyclopis.k119_893486                           C 0 I 33
s Macaca_fascicularis.k141_155037                           47669  1 +     63263 G----------------
i Macaca_fascicularis.k141_155037                       C 0 I 33
s Macaca_fuscata.k119_599327                                 2377  1 -      2568 G----------------
i Macaca_fuscata.k119_599327                            C 0 I 33
s Macaca_leonina.k141_467472                                 2962  1 -      7381 G----------------
i Macaca_leonina.k141_467472                            C 0 I 21
s Macaca_maura.k141_251854                                  46179  1 -     79256 G----------------
i Macaca_maura.k141_251854                              C 0 I 33
s Macaca_mulatta.NC_041755.1                            196036286  1 + 196197964 g----------------
i Macaca_mulatta.NC_041755.1                            C 0 I 33
s Macaca_nemestrina.KQ004885.1                           11446456  1 +  11645122 g----------------
i Macaca_nemestrina.KQ004885.1                          C 0 I 33
s Macaca_nigra.k141_282495                                   5126  1 -     46448 G----------------
i Macaca_nigra.k141_282495                              C 0 I 33
s Macaca_radiata.k141_3680256                                2800  1 -     13212 G----------------
i Macaca_radiata.k141_3680256                           C 0 I 33
s Macaca_siberu.k141_741907                                 16479  1 -     55006 G----------------
i Macaca_siberu.k141_741907                             C 0 I 33
s Macaca_silenus.Contig12                                43841595  1 +  43892939 G----------------
i Macaca_silenus.Contig12                               C 0 I 25
s Macaca_thibetana.k99_662710                               17765  1 -     24607 G----------------
i Macaca_thibetana.k99_662710                           C 0 I 33
s Macaca_tonkeana.k141_2870633                               5131  1 -     27140 G----------------
i Macaca_tonkeana.k141_2870633                          C 0 I 33
s Mandrillus_leucophaeus.scaffold125                     43438180  1 -  43563597 G----------------
i Mandrillus_leucophaeus.scaffold125                    C 0 I 28
s Mandrillus_sphinx.Contig144                             4451000  1 -   4543643 G----------------
i Mandrillus_sphinx.Contig144                           C 0 I 28
s Miopithecus_ogouensis.k141_2935907                         2729  1 +     29742 G----------------
i Miopithecus_ogouensis.k141_2935907                    C 0 I 33
s Nasalis_larvatus.k141_153429                               9236  1 +     48152 G----------------
i Nasalis_larvatus.k141_153429                          C 0 I 16
s Nomascus_annamensis.k141_720788                             618  1 -      1065 G----------------
i Nomascus_annamensis.k141_720788                       C 0 I 21
s Nomascus_concolor.k141_581629                               181  1 -      6578 G----------------
i Nomascus_concolor.k141_581629                         C 0 n 0
s Nomascus_gabriellae.k141_1004198                            489  1 +      1448 G----------------
i Nomascus_gabriellae.k141_1004198                      C 0 I 21
s Nomascus_siki_b.tarseq_80                             25640  1 -  18771707 g----------------
i Nomascus_siki_b.tarseq_80                         C 0 I 26
s Nomascus_siki_a.k141_595747                                  3343  1 +      4512 G----------------
i Nomascus_siki_a.k141_595747                             C 0 I 26
s Pan_paniscus.CM003386.1                               127575349 17 - 205426864 ggttttgttttgttttg
i Pan_paniscus.CM003386.1                               C 0 I 5
s Pan_troglodytes.NBAG03004582.1                              288 17 +      4638 gattttgttttgttttg
i Pan_troglodytes.NBAG03004582.1                        C 0 I 4213
s Papio_anubis.CM001492.2                               188156967  1 - 188283584 g----------------
i Papio_anubis.CM001492.2                               C 0 I 33
s Papio_cynocephalus.k141_883042                             5284  1 +      5367 G----------------
i Papio_cynocephalus.k141_883042                        C 0 N 0
s Papio_hamadryas.Contig15                               47514352  1 +  47705337 G----------------
i Papio_hamadryas.Contig15                              C 0 I 33
s Papio_kindae.k141_5458022                                 68328  1 -    104429 G----------------
i Papio_kindae.k141_5458022                             C 0 I 33
s Papio_papio.k141_979496                                    6864  1 +     14967 G----------------
i Papio_papio.k141_979496                               C 0 I 33
s Papio_ursinus.k141_1345919                                 2723  1 -      7628 G----------------
i Papio_ursinus.k141_1345919                            C 0 I 33
s Piliocolobus_badius.k141_1987485                           2750  1 -      5908 G----------------
i Piliocolobus_badius.k141_1987485                      C 0 I 16
s Piliocolobus_gordonorum.k141_1270531                       3374  1 -     17985 G----------------
i Piliocolobus_gordonorum.k141_1270531                  C 0 I 16
s Piliocolobus_kirkii.k141_929665                            2741  1 +      7694 G----------------
i Piliocolobus_kirkii.k141_929665                       C 0 I 16
s Piliocolobus_tephrosceles.PDMG02000036.1               26741219  1 +  26888534 g----------------
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 I 16
s Pongo_abelii.NDHI03003816.1                              187869  1 -    373494 g----------------
i Pongo_abelii.NDHI03003816.1                           C 0 I 21
s Pongo_pygmaeus.ctg62                                   19808517  1 +  19899266 G----------------
i Pongo_pygmaeus.ctg62                                  C 0 I 21
s Presbytis_comata.k141_672698                               6480  1 -     15069 G----------------
i Presbytis_comata.k141_672698                          C 0 I 16
s Presbytis_mitrata.k141_860013                              6610  1 +     14865 G----------------
i Presbytis_mitrata.k141_860013                         C 0 I 16
s Pygathrix_cinerea.k141_374971                             30601  1 +     56732 G----------------
i Pygathrix_cinerea.k141_374971                         C 0 I 16
s Pygathrix_nigripes_b.ctg79                                 6807089  1 +   6970761 G----------------
i Pygathrix_nigripes_b.ctg79                               C 0 I 16
s Pygathrix_nigripes_a.k141_101123                             6480  1 +     18040 G----------------
i Pygathrix_nigripes_a.k141_101123                        C 0 I 16
s Rhinopithecus_bieti.k119_554384                             890  1 -     17045 G----------------
i Rhinopithecus_bieti.k119_554384                       C 0 I 16
s Rhinopithecus_roxellana.NC_044549.1                   206378367  1 - 206558726 g----------------
i Rhinopithecus_roxellana.NC_044549.1                   C 0 I 16
s Rhinopithecus_strykeri.ctg4                            44857281  1 -  45163003 G----------------
i Rhinopithecus_strykeri.ctg4                           C 0 I 16
s Semnopithecus_entellus.k141_1572367                        4093  1 +     15331 G----------------
i Semnopithecus_entellus.k141_1572367                   C 0 I 16
s Semnopithecus_hypoleucos.k141_761524                       9486  1 +     20762 G----------------
i Semnopithecus_hypoleucos.k141_761524                  C 0 I 16
s Semnopithecus_johnii.k141_785014                         119489  1 +    130994 G----------------
i Semnopithecus_johnii.k141_785014                      C 0 I 16
s Semnopithecus_priam.k141_410937                           38275  1 +     46263 G----------------
i Semnopithecus_priam.k141_410937                       C 0 I 16
s Semnopithecus_schistaceus.k141_387461                     31395  1 +     42640 G----------------
i Semnopithecus_schistaceus.k141_387461                 C 0 I 16
s Semnopithecus_vetulus.k141_1143185                        14435  1 +     30600 G----------------
i Semnopithecus_vetulus.k141_1143185                    C 0 I 16
s Symphalangus_syndactylus.tarseq_24                        15625  1 -  13920577 G----------------
i Symphalangus_syndactylus.tarseq_24                    C 0 I 21
s Theropithecus_gelada.CM009951.1                       194008489  1 - 194193292 g----------------
i Theropithecus_gelada.CM009951.1                       C 0 I 33
s Trachypithecus_auratus.k141_738098                        27591  1 +     38948 G----------------
i Trachypithecus_auratus.k141_738098                    C 0 I 16
s Trachypithecus_crepusculus.k141_1588528                   21323  1 -     32910 G----------------
i Trachypithecus_crepusculus.k141_1588528               C 0 I 16
s Trachypithecus_cristatus.k141_1011511                      2709  1 -     12939 G----------------
i Trachypithecus_cristatus.k141_1011511                 C 0 I 16
s Trachypithecus_francoisi.k141_768164                       2645  1 -     14244 G----------------
i Trachypithecus_francoisi.k141_768164                  C 0 I 16
s Trachypithecus_geei.k141_670367                           44044  1 -     54611 G----------------
i Trachypithecus_geei.k141_670367                       C 0 I 16
s Trachypithecus_germaini.k141_868450                        1847  1 -     11566 G----------------
i Trachypithecus_germaini.k141_868450                   C 0 I 16
s Trachypithecus_hatinhensis.k141_504423                     4024  1 -     15592 G----------------
i Trachypithecus_hatinhensis.k141_504423                C 0 I 16
s Trachypithecus_laotum.k141_760702                          2680  1 +     14371 G----------------
i Trachypithecus_laotum.k141_760702                     C 0 I 16
s Trachypithecus_leucocephalus.k141_381681                    961  1 +     12481 G----------------
i Trachypithecus_leucocephalus.k141_381681              C 0 I 16
s Trachypithecus_melamera.k141_699241                         837  1 -     24393 G----------------
i Trachypithecus_melamera.k141_699241                   C 0 I 16
s Trachypithecus_obscurus.k141_1115109                       6083  1 -     28054 G----------------
i Trachypithecus_obscurus.k141_1115109                  C 0 I 16
s Trachypithecus_phayrei.ctg3                            44660883  1 -  44834318 G----------------
i Trachypithecus_phayrei.ctg3                           C 0 I 16
s Trachypithecus_pileatus.k141_1022309                       3191  1 +     13828 G----------------
i Trachypithecus_pileatus.k141_1022309                  C 0 I 16
e Eptesicus_fuscus.JH977687.1                             4707549  0 +   6522550 C
e Macroglossus_sobrinus.MacSob_scaffold_879                701732 90 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             39436  0 -     47444 C
e Petromus_typicus.PetTyp_scaffold_33007                    14226  0 -     36578 C
e Sorex_araneus.JH798170.1                               17767061  0 -  27805282 C
e Dinomys_branickii.DinBra_scaffold_1996                   157598  0 +    228994 C
e Erinaceus_europaeus.JH835290.1                         11534859  0 +  16010500 C
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           3364  0 -      6963 C
e Aplodontia_rufa.AprRuf_scaffold_156013                     4258 12 +      5067 I
e Oryctolagus_cuniculus.CM000803.1                      141876917  0 + 163896628 C
e Ochotona_princeps.JH802095.1                            4996634  0 -  23139505 C
e Lepus_americanus.LepAme_scaffold_62849                    13880  0 +     22452 C
e Perognathus_longimembris.PerPac_flattened_line_19359        641  5 +     49596 I
e Dipodomys_stephensi.DipSte_scaffold_44365                 28610  0 +     28912 C
e Dipodomys_ordii.KN672545.1                              3656967  0 +   4240102 C
e Suricata_suricatta.SurSur_flattened_line_20339            28181  0 +     62062 C
e Ziphius_cavirostris.ZipCav_flattened_line_127025           7520  0 -      8775 C
e Zalophus_californianus.ZalCal_flattened_line_4097        214889  0 -    227762 C
e Vulpes_lagopus.VulLag_flattened_line_2045                138908  0 -    281493 C
e Vicugna_pacos.KN269600.1                                1525269  0 -   2331223 C
e Ursus_maritimus.KK498671.1                              6515415  0 +  28682327 C
e Uropsilus_gracilis.UroGra_scaffold_69449                   1920  0 +     10241 C
e Tursiops_truncatus.MRVK01000923.1                      69314021  0 -  96451834 C
e Trichechus_manatus.JH594618.1                          16085939  0 +  31416278 C
e Tragulus_javanicus.TraJav_scaffold_14717                   5750  0 +     90398 C
e Tonatia_saurophila.TonSau_scaffold_3334                  136665  0 -    259118 C
e Tolypeutes_matacus.TolMat_scaffold_269431                  6100  0 +      6782 C
e Tapirus_terrestris.TapTer_scaffold_14939                  58440  0 +     99546 C
e Tapirus_indicus.TapInd_scaffold_176                      807728  0 +   1148477 C
e Tamandua_tetradactyla.TamTet_scaffold_26877               15294  0 +     45698 C
e Tadarida_brasiliensis.TadBra_scaffold_61492                 878  0 +     20549 C
e Sus_scrofa.CM000824.4                                 189272699  0 + 218635234 C
e Spilogale_gracilis.SpiGra_flattened_line_905             235418  0 -    276980 C
e Solenodon_paradoxus.SolPar_flattened_line_1012            19485 11 +    739146 I
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   32880  0 -    114521 C
e Saiga_tatarica.SaiTat_scaffold_82192                       8546  0 +     12214 C
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                19923  0 +    109198 C
e Rhinolophus_sinicus.LVEH01000179.1                      1788458  0 +   2252614 C
e Rangifer_tarandus.RanTarSib_scaffold_24239                16389  0 +     68503 C
e Puma_concolor.QAVW01000427.1                          131534966  0 - 161321710 C
e Pteropus_vampyrus.KN525959.1                             604541  0 -   3946241 C
e Pteropus_alecto.KB031157.1                             13246590  0 -  17261082 C
e Pteronura_brasiliensis.PteBra_flattened_line_1343        247294  0 -    344369 C
e Pteronotus_parnellii.KE867983.1                            4678  0 -     27784 C
e Procavia_capensis.ProCapCap_scaffold_149274                2467 1156 -      9567 I
e Platanista_gangetica.PlaMin_flattened_line_72990           5996  0 +     21690 C
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Phocoena_phocoena.PhoPho_flattened_line_11948            121909  0 -    122454 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    116408  0 -    135482 C
e Pantholops_hodgsonii.KE114631.1                         1066721  0 -   1292953 C
e Panthera_tigris.KE721879.1                              5028371  0 -   6340057 C
e Panthera_pardus.KV860323.1                              3638695  0 +  18214204 C
e Panthera_onca.PanOnc_flattened_line_1615                  34945  0 +    295523 C
e Ovis_canadensis.OviCan_scaffold_6251                      79086  0 +    140051 C
e Ovis_aries.CM001582.2                                 134077871  0 - 275406953 C
e Otocyon_megalotis.JAEUCK010005121.1                      308812  0 -    505867 C
e Orycteropus_afer.OryAfe_flattened_line_13509              60549  0 -     66828 C
e Orcinus_orca.KB316965.1                                 7225305  0 -   7562323 C
e Okapia_johnstoni.LVCL01S0017931.1                         37593  0 +     78940 C
e Odocoileus_virginianus.KZ101650.1                       1080275  0 +   1425656 C
e Odobenus_rosmarus.KB229369.1                             680162  0 -   3126709 C
e Nyctereutes_procyonoides.CAJHUB010000786.1                31528  0 +   3668941 C
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Neophocaena_asiaeorientalis.KZ688543.1                  3951620  0 -   4490290 C
e Neomonachus_schauinslandi.NINY01007774.1                4485495  0 -  14209539 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             5628  0 -      8794 C
e Myotis_myotis.MyoMyo_scaffold_6123                        12401  0 +     66751 C
e Myotis_lucifugus.GL429887.1                             3467158  0 -   3747815 C
e Myotis_davidii.KB114863.1                               5021080  0 +   6462685 C
e Myotis_brandtii.KE161952.1                               969656  0 +   8389877 C
e Mustela_putorius.JH417978.1                             4424983  0 -  28371801 C
e Murina_feae.MurFea_scaffold_2254                          22038  0 -    100666 C
e Mungos_mungo.MunMun_flattened_line_8729                  145521  0 -    168139 C
e Moschus_moschiferus.MosMos_scaffold_78805                  2095  0 -     19904 C
e Mormoops_blainvillei.MorMeg_scaffold_2952                162039  0 +    265003 C
e Monodon_monoceros.MonMon_M_scaffold_5598                 147008  0 +    154973 C
e Mirounga_angustirostris.MirAng_flattened_line_8852        12105  0 -    104932 C
e Miniopterus_schreibersii.MinSch_scaffold_24116            35177  0 +     45743 C
e Miniopterus_natalensis.LDJU01000022.1                   8210688  0 +  10048721 C
e Micronycteris_hirsuta.MicHir_scaffold_37978               23515  0 -     32043 C
e Microgale_talazaci.MicTal_scaffold_34660                  35528  0 -     48017 C
e Mesoplodon_bidens.MesBid_scaffold_227248                    907  0 -      1377 C
e Mellivora_capensis.MelCap_flattened_line_15433             1615  0 -     87323 C
e Megaderma_lyra.MegLyr_scaffold_3562                       64783 239 -    234502 I
e Manis_pentadactyla.KN017078.1                             36816  0 +     58827 C
e Manis_javanica.JSZB01003966.1                            146673  0 +    252755 C
e Lycaon_pictus.CM007556.1                               11088727  0 +  39895028 C
e Loxodonta_africana.GL010040.1                          20595417  0 -  62548349 C
e Lipotes_vexillifer.KE558548.1                            136580  0 +   3060487 C
e Leptonychotes_weddellii.KB714749.1                      3086589  0 -   3498232 C
e Lasiurus_borealis.LasBor_scaffold_59542                    4384  0 +     26176 C
e Kogia_breviceps.KogBre_flattened_line_35920               24230  0 +     37189 C
e Inia_geoffrensis.IniGeo_flattened_line_66725               9623  0 +     17520 C
e Hyaena_hyaena.HyaHya_flattened_line_20729                 17893  9 -     67322 I
e Hipposideros_galeritus.HipGal_scaffold_104691              8154 325 -      9143 I
e Hipposideros_armiger.JXIK01001085.1                      279004  0 -    477199 C
e Hippopotamus_amphibius.HipAmp_scaffold_1308              147723  0 +    277961 C
e Heterohyrax_brucei.HetBruBak_scaffold_25354               61360 1157 +     73687 I
e Hemitragus_hylocrius.HemHyl_scaffold_16669                28080  0 -     91191 C
e Helogale_parvula.HelPar_flattened_line_22962              17826  0 +     53719 C
e Giraffa_tippelskirchi.LVKQ01S012154.1                    181865  0 -    189561 C
e Felis_nigripes.FelNig_flattened_line_8080                 21802  0 +     52776 C
e Felis_catus_fca126.CM031420.1                         129280662  0 - 158578461 C
e Eubalaena_japonica.EubJap_flattened_line_7756             62087  0 +     89355 C
e Eschrichtius_robustus.EscRob_flattened_line_685          315634  0 +    330699 C
e Equus_przewalskii.ATBW01073585.1                          13576  0 +     92910 C
e Equus_caballus.CM000402.2                              13352087  0 +  41866177 C
e Equus_asinus.JREZ01000062.1                             5853582  0 -   7175178 C
e Enhydra_lutris.KZ291749.1                              85872803  0 +  99434291 C
e Elephantulus_edwardii.JH947210.1                        7816992 12417 +  15467074 I
e Elaphurus_davidianus.JRFZ01086400.1                     1492060  0 +   1727528 C
e Eidolon_helvum.KE772537.1                                 12858  0 +     24177 C
e Echinops_telfairi.JH980316.1                           22999536  0 -  44670279 C
e Diceros_bicornis.DicBicMic_scaffold_9545                   3794  0 +    151128 C
e Dicerorhinus_sumatrensis.PEKH010003161.1                 323142  0 +    993696 C
e Desmodus_rotundus.KZ672188.1                           18699611  0 -  18957592 C
e Delphinapterus_leucas.KZ290064.1                       80037418  0 -  96802777 C
e Dasypus_novemcinctus.JH568778.1                          184239  0 -   6883506 C
e Cryptoprocta_ferox.CryFer_flattened_line_19014            52628  0 -     70449 C
e Crocidura_indochinensis.CroInd_scaffold_848148              199  0 +      1327 C
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1008 325 -      5782 I
e Condylura_cristata.JH655880.1                          60614198  0 +  78930452 C
e Choloepus_hoffmanni.KN194586.1                           762369  0 +    964067 C
e Choloepus_didactylus.ChoDid_scaffold_36182                17064  0 -     21363 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_160623         4247  0 -      9338 C
e Catagonus_wagneri.CatWag_scaffold_1305                   159479  0 -    276539 C
e Carollia_perspicillata.CarPer_scaffold_4436               60326  0 +     67245 C
e Capra_hircus.CM004562.1                               135707023  0 - 157403528 C
e Capra_aegagrus.CM003214.1                              21325795  0 + 157394656 C
e Canis_lupus_orion.HG994411.1                           16456286  0 -  44759192 C
e Canis_lupus_familiaris.chr31                           11089271  0 +  39895921 C
e Canis_lupus_dingo.QKWQ01001993.1                       11266737  0 -  35597290 C
e Canis_lupus_VD.CanFam_VD_scaffold_16982                   15096  0 +     87036 C
e CanFam4.chr31                                          11520070  0 +  39901454 C
e Camelus_ferus.KB016973.1                                2973602  0 +   6889770 C
e Camelus_dromedarius.KN271192.1                           397866  0 -  15254737 C
e Camelus_bactrianus.KN276303.1                           3220165  0 -   8989139 C
e Bubalus_bubalis.KI419065.1                              1233374  0 -   1914593 C
e Bos_taurus.CM000177.6                                 136296294  0 - 158972876 C
e Bos_mutus.JH883513.1                                     573102  0 -    998990 C
e Bos_indicus.CM003021.1                                138140561  0 - 161108492 C
e Bison_bison.KN264915.1                                  6560446  0 +   6870073 C
e Beatragus_hunteri.BeaHun_scaffold_21644                   43830  0 -     72089 C
e Balaenoptera_bonaerensis.DF502048.1                        5966  0 -     13118 C
e Balaenoptera_acutorostrata.KI537095.1                  26380794  0 +  51448160 C
e Artibeus_jamaicensis.ArtJam_scaffold_41619                 9539  0 -     29036 C
e Antilocapra_americana.AntAmePen_scaffold_42841            31302  0 +     33004 C
e Anoura_caudifer.AnoCau_scaffold_422                      391119  0 -    631301 C
e Ammotragus_lervia.NIVO01013474.1                        3520720  0 +   4113121 C
e Ailurus_fulgens.LNAC01000003.1                          7095279  0 -  16596857 C
e Ailuropoda_melanoleuca.LNAT01000321.1                  10657927  0 +  23371972 C
e Acinonyx_jubatus.LLWD01000356.1                         2034611  0 +   3721120 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19596  0 -    119109 C
e Glis_glis.GliGli_scaffold_79770                           14364  0 -     18683 C
e Zapus_hudsonius.ZapHud_scaffold_64392                     16436  0 -     20485 C
e Jaculus_jaculus.JH725517.1                              8566539  0 +  11848649 C
e Allactaga_bullata.AllBul_scaffold_70162                   17525  0 -     22067 C
e Galeopterus_variegatus.GalVar_scaffold_354               156907  0 +    324696 C
e Microtus_ochrogaster.CM001673.1                        22820341  4 -  98408828 I
e Xerus_inauris.XerIna_scaffold_7898                       127482  5 -    134049 I
e Varecia_variegata.k141_775891                             25501  3 -     33872 I
e Varecia_rubra.k141_432109                                  5966  3 -     20643 I
e Tupaia_tana.TupTan_flattened_line_68454                    5906  0 +     13056 C
e Tupaia_chinensis.KB320831.1                             2793720  0 -   3938065 C
e Tarsius_wallacei.k141_48636                               60408  0 +     65473 C
e Tarsius_lariang.k141_609102                               27092  0 +     42269 C
e Spermophilus_dauricus.KZ294190.1                        2240365  5 +   2842873 I
e Sigmodon_hispidus.SigHis_scaffold_11332                  100871  0 -    120886 C
e Sapajus_macrocephalus.k141_966464                         21380  0 -     62485 C
e Sapajus_apella.ctg10                                   17342019  0 -  30362882 C
e Saimiri_ustus.k141_1282476                                 5292  0 -     76454 C
e Saimiri_sciureus.k141_1947592                              5355  0 +     60816 C
e Saimiri_oerstedii.k141_841116                              5377  0 +     67014 C
e Saimiri_macrodon.k141_2087127                              5284  0 -     60842 C
e Saimiri_cassiquiarensis.k141_808270                        5342  0 +     34089 C
e Saimiri_boliviensis.NW_024100938.1                     15673429  0 -  43202129 C
e Rattus_norvegicus.chr11                                13915860 1475 +  90463843 I
e Psammomys_obesus.NESX01026517.1                           36081  2 +     77221 I
e Propithecus_verreauxi.k141_158021                         39953  3 -     48185 I
e Propithecus_tattersalli.k141_907138                       17689  3 -     53241 I
e Propithecus_perrieri.k141_7554                            18055  3 +     27322 I
e Propithecus_edwardsi.k141_1317105                         36132  3 -     44753 I
e Propithecus_diadema.k141_577245                           43745  3 +     52369 I
e Propithecus_coronatus.k141_1353159                         4402  3 +     11805 I
e Propithecus_coquerelli.NW_012147863.1                     19492  3 -     30946 I
e Prolemur_simus.MPIZ01000048.1                           6849325  3 +  12164890 I
e Plecturocebus_moloch.k141_890597                          24007  0 -     75465 C
e Plecturocebus_miltoni.k141_841561                         13420  0 +    134592 C
e Plecturocebus_hoffmannsi.k141_985533                       1414  0 -    119457 C
e Plecturocebus_grovesi.k141_242819                         23697  0 +    152463 C
e Plecturocebus_dubius.k141_3565563                          4343  0 -     55515 C
e Plecturocebus_cupreus.k141_1145860                          260  0 -     43940 C
e Plecturocebus_cinerascens.k141_744510                     23624  0 +    147771 C
e Plecturocebus_caligatus.k141_2539816                      14024  0 -     98129 C
e Plecturocebus_brunneus.k141_498086                        23784  0 +     67491 C
e Plecturocebus_bernhardi.k141_959214                       23572  0 +     44506 C
e Pithecia_vanzolinii.k141_831006                           14232  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13475329  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          6329  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        13101  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                              9902  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        25855  0 +     78826 C
e Pithecia_albicans.k141_991845                             44470  0 -     61926 C
e Peromyscus_maniculatus.KI615518.1                       4950937  0 -   8017169 C
e Perodicticus_potto.k141_713187                            25474  3 -     27972 I
e Perodicticus_ibeanus.k141_117958                           6160  3 -     23713 I
e Otolemur_garnettii.GL873528.1                          18009456  3 -  38779656 I
e Otolemur_crassicaudatus.k141_505435                        1475  3 -     53940 I
e Onychomys_torridus.OnyTor_scaffold_12578                  37690  6 +     62360 I
e Ondatra_zibethicus.OndZib_scaffold_6821                  125594  4 +    145789 I
e Octodon_degus.JH651621.1                                3686495  0 +  10294119 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65670190  0 +  89412551 C
e Nycticebus_coucang.k141_2051882                            4581  0 +      6470 C
e Nycticebus_bengalensis.LG16                            65567855  0 -  95554990 C
e Nannospalax_galili.KL201303.1                            119159  6 +    362372 I
e Myocastor_coypus.MyoCoy_scaffold_3653                     91001  0 -    117718 C
e Muscardinus_avellanarius.MusAve_scaffold_9643             12869  0 +     98495 C
e Mus_spretus.CM004110.1                                 74333150  0 +  97876770 C
e Mus_pahari.LT608305.1                                  67556618  0 +  89017189 C
e Mus_musculus.chr16                                     75490415  0 +  98207768 C
e Mus_caroli.LT608236.1                                  70767338  0 +  92629107 C
e Mirza_zaza.k141_226143                                     6369  3 +      8497 I
e Microcebus_murinus.CM007691.1                          16510980  3 +  47401472 I
e Mesocricetus_auratus.KB708139.1                         1047499  8 -  26018355 I
e Meriones_unguiculatus.MerUng_scaffold_52233               13799  2 +     15977 I
e Marmota_marmota.CZRN01000005.1                         36874268  5 +  64221397 I
e Loris_tardigradus.ctg97                                 3779150  0 +   6799190 C
e Loris_lydekkerianus.k141_550999                           11401  0 +     84689 C
e Lepilemur_septentrionalis.k141_578524                     32347  3 -     33031 I
e Lepilemur_ruficaudatus.k141_617879                        79356  3 +    116806 I
e Lepilemur_dorsalis.k141_134267                            54094  3 +     63517 I
e Lepilemur_ankaranensis.k141_884009                        24708  3 +     39228 I
e Lemur_catta.scaffold_1                                258407958  3 - 285822530 I
e Lagothrix_lagothricha.k141_12968                          50864  0 -    147782 C
e Indri_indri.k141_5141390                                   1122  3 -      3181 I
e Ictidomys_tridecemlineatus.JH393315.1                   7126449  5 +  13083262 I
e Hystrix_cristata.HysCri_scaffold_50788                     6758  0 +     22540 C
e Heterocephalus_glaber.JH602058.1                        2551694  0 +  31725842 C
e Hapalemur_occidentalis.k141_797938                        46279  3 -     54384 I
e Hapalemur_meridionalis.k141_186231                        29651  3 -     42470 I
e Hapalemur_griseus.k141_1387522                             6402  3 +     56096 I
e Hapalemur_gilberti.k141_279011                             1076  3 -     11661 I
e Hapalemur_alaotrensis.k141_1280836                         2596  3 +     10286 I
e Graphiurus_murinus.GraMur_scaffold_4493                   77863  0 +    118900 C
e Galagoides_demidoff.k141_1769638                          11100  3 +     27357 I
e Galago_senegalensis.k141_964197                           14034  3 -     43889 I
e Galago_moholi.ctg555                                     211660  3 -    847004 I
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I
e Eulemur_sanfordi.k141_186399                              16595  3 -     29447 I
e Eulemur_rufus.k141_1620292                                33869  3 +     46535 I
e Eulemur_rubriventer.k141_411740                           19131  3 +     26808 I
e Eulemur_mongoz.k141_825972                                16675  3 +     27497 I
e Eulemur_fulvus.k141_653297                                12015  3 +    109717 I
e Eulemur_flavifrons.k141_903901                             8537  3 +     60246 I
e Eulemur_coronatus.k141_3240342                            12216  3 +     36558 I
e Eulemur_collaris.k141_311830                               5742  3 -      6809 I
e Eulemur_albifrons.k141_715837                              5810  3 +     13586 I
e Ellobius_talpinus.LOJH01090055.1                           7151  4 -      7838 I
e Ellobius_lutescens.LOEQ01003611.1                        240029  1 -    369425 I
e Dolichotis_patagonum.DolPat_scaffold_14102                36687  0 -     73477 C
e Daubentonia_madagascariensis.ctg11                     16845635  3 +  31942871 I
e Dasyprocta_punctata.DasPun_flattened_line_634             59461  0 -    236241 C
e Cuniculus_paca.CunPac_flattened_line_16637                18370  0 +     26546 C
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 31676  0 -     67205 C
e Ctenodactylus_gundi.CteGun_scaffold_447                  209031  0 -    956709 C
e Cricetulus_griseus.LT883672.1                          53029812 13 +  72327488 I
e Cricetomys_gambianus.CriGam_scaffold_949                 279153  0 -    399297 C
e Chiropotes_sagulatus.k141_773804                          16013  0 +     40510 C
e Chiropotes_israelita.k141_1189915                         71833  0 +    196370 C
e Chinchilla_lanigera.JH721867.1                         15962331  0 +  43084221 C
e Cheracebus_torquatus.k141_315545                          47026  0 +     54541 C
e Cheracebus_regulus.k141_2128895                           42347  0 +     57117 C
e Cheracebus_lugens.k141_203936                             23307  0 +     25473 C
e Cheracebus_lucifer.k141_619653                             6289  0 -     18223 C
e Cheirogaleus_medius.k141_133808                            8812  3 +     13308 I
e Cheirogaleus_major.k141_1157592                           59764  3 -     68416 I
e Cephalopachus_bancanus.k141_702587                         8664  0 +     21754 C
e Cebus_unicolor.k141_239009                                13261  0 +     25043 C
e Cebus_olivaceus.k141_93739                                 9018  0 -     26817 C
e Cebus_albifrons.Contig22                               18891474  0 -  29618158 C
e Cavia_tschudii.CavTsc_scaffold_488                       177368  0 +    436027 C
e Cavia_porcellus.DS562889.1                             15799177  0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15787241  0 -  24422027 C
e Castor_canadensis.CasCan_scaffold_47037                   31717  7 +     33760 I
e Carlito_syrichta.NW_007248099.1                          309640  0 +    345090 C
e Cacajao_melanocephalus.k141_1160263                        8247  0 -    134917 C
e Cacajao_hosomi.k141_303789                                15704  0 -    216513 C
e Cacajao_calvus.k141_96166                                 13661  0 +    125063 C
e Cacajao_ayresi.k141_724503                               114632  0 -    171031 C
e Avahi_peyrierasi.k141_798820                               1105  3 +      6337 I
e Avahi_laniger.k141_2840928                                 7489  3 -     16375 I
e Ateles_paniscus.k141_1631200                               6745  0 -     25888 C
e Ateles_marginatus.k141_899112                             64774  0 +    119057 C
e Ateles_geoffroyi_a.k141_1300742                             16782  0 -     58268 C
e Ateles_chamek.k141_1072810                                12279  0 +     89302 C
e Ateles_belzebuth.k141_1348307                             61266  0 +     85812 C
e Ateles_geoffroyi_b.tarseq_2582                             9539995  0 +  39197703 C
e Arctocebus_calabarensis.k141_587554                        1753  3 +      9265 I
e Aotus_vociferans.k141_718647                               6726  0 +     23246 C
e Aotus_trivirgatus.k141_1740727                             6724  0 -    104377 C
e Aotus_nancymaae.KZ196176.1                              5750135  0 +   9889416 C
e Aotus_griseimembra.k141_3275623                            6178  0 +     22701 C
e Aotus_azarae.k141_3170768                                 63236  0 +     78111 C
e Alouatta_seniculus.k141_1531728                             741  0 -      1692 C
e Alouatta_puruensis.k141_1284840                            4606  0 -      4927 C
e Alouatta_palliata.k141_2764429                              526  0 -      1480 C
e Alouatta_nigerrima.k141_3537692                             613  0 +      1660 C
e Alouatta_macconnelli.k141_2177643                           564  0 -      1868 C
e Alouatta_juara.k141_1244470                                1180  0 +      2129 C
e Alouatta_discolor.k141_811576                             11557  0 -     21359 C
e Alouatta_caraya.k141_1710068                                601  0 +      1555 C
e Alouatta_belzebul.k141_1818029                            10884  0 -     18050 C
e Acomys_cahirinus.AcoCah_scaffold_1625                    113354  2 -    189883 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               14294 158 +    209709 agatgtag--tctctctctgtcacc-aggctggagtacagtg-acacagtctctgctcactgcaatctctgcctcccagg-tccaagcatttctcctgcctcagcctcccaa-gtagctggaactacaggcacgtgcca----ccatacccagctaactt--ttgtatg----------------------t
s Allenopithecus_nigroviridis.k141_2469532                   2014 171 -     60446 agacagag--tctctctctgtcacc-aggctggagtgcaga-ggcgcaatctcggctcactgcaacctccgcctcccagg-accaagcgattctcctgcctcagcctcctga-gtagctgagactacaggcacgtgcca----ccacgcccagctacttt--ttgtatg-g-ctt-ttttttttt------t
i Allenopithecus_nigroviridis.k141_2469532              I 33 C 0
s Allochrocebus_lhoesti.k141_3566948                         2729 171 -     29318 agacagag--tctctctctgtcacc-aggctggagtgcagt-ggcgcaatctcggctcactgcatcctccgcctcccagg-tccaagcgattctcctgcctcagcctcctga-gtagctgagactacaggcacatgcca----ccacgcccagctacttt--ttgtatg-gt-tg-ttttttttt------t
i Allochrocebus_lhoesti.k141_3566948                    I 28 C 0
s Allochrocebus_preussi.k141_1108977                         1664 172 +     38766 agacagag--tctctctctgtcacc-aggctggagtgcagt-ggcgcaatctcggctcactgcatcctccgcctcccagg-tccaagcgattctcctgcctcagcctcctga-gtagctgagactacaggcacgtgcca----ccatgcccagctacttt--ttgtatgattgtt-tttttttt-------t
i Allochrocebus_preussi.k141_1108977                    I 28 C 0
s Allochrocebus_solatus.k141_371672                          2623 171 -     80423 agacagag--tctctctctgtcacc-aggctggagtgcagt-ggcgcaatctcggctcactgcatcctccgcctcccagg-tccaagcgattctcctgcctcagcctcctga-gtagctgagactacaggcacgtgcca----ccacgcccagctacttt--ttgtatg-gt-tg-ttttttttt------t
i Allochrocebus_solatus.k141_371672                     I 28 C 0
s Cercocebus_atys.KQ010443.1                              6555955 171 +   6739814 agacagag--tctctctctgtcacc-aggctggagtgcagt-ggcgcaatctcggctcactgcatcctccgcctcccagg-tccaagcgattctcctgcctcagcctcctga-gtagctgagactacaggcatgtgcca----ccacgcccagctacttt--ttgtatg-g-gtt-ttttttttt------t
i Cercocebus_atys.KQ010443.1                            I 28 C 0
s Cercocebus_chrysogaster.k141_2328246                      27432 171 +     60454 agacagag--tctctctctgtcacc-aggctggagtgcagt-ggcgcaatctcggctcactgcatcctccgcctaccagg-tccaagcgattctcctgcctcagcctcctga-gtagctgagactacaggcatgtgcca----ccacgcccagctacttt--ttgtatg-g-gtt-ttttttttt------t
i Cercocebus_chrysogaster.k141_2328246                  I 28 C 0
s Cercocebus_lunulatus.k141_4634644                          2638 171 -     21101 acacacag--tctctctctgtcacc-aggctggagtgcagt-ggcgcaatctcggctcactgcatcctccgcctcccagg-tccaagcgattctcctgcctcagcctcctga-gtagctgagactacaggcacgtgcca----ccacgcccagctacttt--ttgtatg-g-gtt-ttttttttt------t
i Cercocebus_lunulatus.k141_4634644                     I 28 C 0
s Cercocebus_torquatus.k141_3969582                         59947 171 -    107033 agacagag--tctctctctgtcacc-aggctggagtgcagt-ggcgcaatctcggctcactgcatcctccgcctcccagg-tccaagcgattctcctgcctcagcctcctga-gtagctgagactacaggcacgtgcca----ccacgcccagctacttt--ttgtatg-g-gtt-ttttttttt------t
i Cercocebus_torquatus.k141_3969582                     I 28 C 0
s Cercopithecus_ascanius.k141_4123525                        2830 172 -     17608 agacagag--tctctctctgtcacc-aggctggagtgcaga-ggtgcagtctcggctcactgcatcctccgcctcccagg-tccaagcgattctcctgcctcagcctcctga-gtagctgagactacaggcacgtgcca----ccacgcccagctacttt--ttgtatg-gt-tt-tttttttttt-----t
i Cercopithecus_ascanius.k141_4123525                   I 21 C 0
s Cercopithecus_cephus.k141_3893260                             1 160 +     45019 ------------------tgtcacc-aggctggagtgcaga-ggcgcagtctcggctcactgcatcctccgcctcccagg-tccaagcgattctcctgcctcagcctcctga-gtagctgagactacaggcacgtgcca----ccacgcccagctacttt--ttgtaTT---TTT-TTTTTTTTTTTTTTTT
i Cercopithecus_cephus.k141_3893260                     N 0 C 0
s Cercopithecus_diana.k141_2561715                             74 171 +     15177 agacagag--tctctctctgtcacc-aggctggagtgcaga-ggcgcagtctcggctcactgcatcctccgtctcccagg-tccaagtgattctcctgcctcagcctcctga-gtagctgagactacaggcacgtgcca----ccacgcccagctacttt--ttgtatg-gt-tt-ttttttttt------t
i Cercopithecus_diana.k141_2561715                      N 0 C 0
s Cercopithecus_hamlyni.k141_129805                          2874 171 +     16677 agacagag--tctctctctgtcacc-aggctggagtgcaga-ggcgcagtctcggctcactgcatcctccgcctcccagg-tccaagtgattctcctgcctcagcctcctga-gtagctgagactacaggcacgtgcca----tcacgcccagctacttt--ttgtatg-gt-tt-ttttttttt------t
i Cercopithecus_hamlyni.k141_129805                     I 23 C 0
s Cercopithecus_lowei.k141_623764                           25043 171 +     35983 agacagag--tctctctctgtcacc-aggctggtgtgcaga-ggcgcagtctcggctcactgcatcctccgcctcccagg-tccaagcgattctcccgcctcagcctcctga-gtagctgagactacaggcacgtgcca----tcacgcccagctacttt--ttgtatg-gt-tt-ttttttttt------t
i Cercopithecus_lowei.k141_623764                       I 33 C 0
s Cercopithecus_albogularis.ctg51                              11991569 174 +  12117833 agacagag--tctctctctgtcacc-tggctggagtgcaga-ggcgcagtctcggctcactgcatcctccgcctcccagg-tccaagcgattctcctgcctcagcctcctga-gtagctgagactacaggcacgtgcca----tcacgcccagctacttt--ttgtatg-gt-tt-tttttttttttt---t
i Cercopithecus_albogularis.ctg51                             I 33 C 0
s Cercopithecus_mona.ctg12                               46478329 171 +  46592721 agacagag--tctctctctgtcacc-aggctggagtgcaga-ggcgcagtctcggctcactgcatcctccgcctatcagg-tccaagggattctcctgcctcagcctcctga-gtagctgagactacaggcatgtgcca----tcacgcccagctacttt--ttgtatg-gt-tt-ttttttttt------t
i Cercopithecus_mona.ctg12                              I 33 C 0
s Cercopithecus_neglectus.k141_2078027                      41879 176 -     45581 agacagag--tctctctctgtcaca-aggctggagtgcaga-ggcgcagtctcggctcactgcatcctccgcctcccagg-tccaagcgattctcctgcctcagcctcctga-gtagctgagactacaggcatgtgcca----tcacgcccagctacttt--ttgtatg-gt-tt-tttttttttttttt-t
i Cercopithecus_neglectus.k141_2078027                  I 33 C 0
s Cercopithecus_nictitans.k141_1129315                       2885 172 +     35577 agacagag--tctctctctgtcacc-tggctggagtgcaga-ggcgcagtctcggctcactgcatcctccgcctcccagg-tccaagggattctcctgcctcagcctcctga-gtagctgagacaacaggcacgtgcca----tcacgcccagctacttt--ttgtatg-gt-tt-tttttttttt-----t
i Cercopithecus_nictitans.k141_1129315                  I 33 C 0
s Cercopithecus_petaurista.k141_64532                        2660 174 -     25661 agacagag--tctctctctgtcacc-aggctggagtgcaga-ggcgcagtctcggctcactgcatcctccgcctcccagg-tccaagcgattctcctgcctcagcctcctga-gtagctgagacaacaggcacgtgcca----ccacgcccagctacttt--ttgtatg-gt-tt-tttttttttttt---t
i Cercopithecus_petaurista.k141_64532                   I 33 C 0
s Cercopithecus_pogonias.k141_3109732                        2638 172 -     17744 agacagag--tctctctctgtcacc-aggctggagtgcaga-ggcgcagtctcggctcactgcatcctccgcctcccagg-tccaagcgattctcccgcctcagcctcctga-gtagctgagactacaggcacgtgcca----tcacgcccagctacttt--ttgtatg-gt-tt-tttttttttt-----t
i Cercopithecus_pogonias.k141_3109732                   I 33 C 0
s Cercopithecus_roloway.k141_2263608                        22245 170 +     37128 agacagag--tctctctctgtcacc-aggctggagtgcaga-ggcacagtctcggctcactgcatcctccgcctcccagg-tccaagtgattctcctgcctcagcctcctga-gtagctgagactacaggcacgtgcca----ccacgcccagctacttt--ttgtatg-gt-tt-tttttttt-------t
i Cercopithecus_roloway.k141_2263608                    I 23 C 0
s Chlorocebus_aethiops.ctg22                             15140243 167 -  15256731 agacagag--tctctctctgtcacc-aggctggagtgcagt-ggcgcaatctcggctcactgcatcctccgcctcccagg-tccaagcgattctcctgcctcagcctcctga-gtagctgagactacaggcacgtgcca----ccacgcccagctacttt--ttgtatg-gt-tg-ttttt----------t
i Chlorocebus_aethiops.ctg22                            I 28 C 0
s Chlorocebus_pygerythrus.k141_1486215                      34853 166 -     53260 agacagag--tctctctctgtcacc-aggctggagtgcagt-ggcgcaatctcggctcactgcatcctctgcctcccagg-tccaagcgattctcctgcctcagcctcctga-gtagctgagactacaggcacgtgcca----ccacgcccagctacttt--ttgtatg-gt-tt-tttt-----------t
i Chlorocebus_pygerythrus.k141_1486215                  I 23 C 0
s Chlorocebus_sabaeus.CM001963.2                        101145411 167 + 101219884 agacagag--tctctctctgtcacc-aggctggagtgcagt-ggcgcaatctcagctcactgcatcctccgcctcccagg-tccaagcgattctcctgcctcagcctcctga-gtagctgagactacaggcacgtgcca----ccacgcccagctacttt--ttgtatg-gt-tg-ttttt----------t
i Chlorocebus_sabaeus.CM001963.2                        I 28 C 0
s Colobus_angolensis.KN985967.1                          10887163 154 +  10971483 agac--ag--tctctctctgtcacc-aggctggagtgcagt-ggtgcaatctcggctcactgcaacttccacctcccggg-tccaagcgattctcctgcctcagcctcccga-gtagctgagactacaggcacatgcca----ccatgcccagctaattt--gtggat------------------------
i Colobus_angolensis.KN985967.1                         I 16 C 0
s Colobus_guereza.LG08                                  147665328 156 + 156195979 agac--ag--tctctctctgtcacc-aggctggagtgcagt-ggtgcaatctcggctcactgcaacttccacctcccggg-tccaagcgattctcctgcctcagcctcctga-gtagctgagactacaggcacatgcca----ccatgcccagctaattt--ttgtgtg----------------------t
i Colobus_guereza.LG08                                  I 16 I 17
s Colobus_polykomos.k141_1406057                            17313 158 +     23629 agac--agagtctctctctgtcacc-aggctggagtgcagt-ggtgcaatctcggctcactgcaacttccacctcccggg-tccaagcgattctcctgcctcagcctcctga-gtagctgagactacaggcacatgcca----ccatgcccagctaattt--ttgtgtg----------------------t
i Colobus_polykomos.k141_1406057                        I 16 I 12
s Erythrocebus_patas.Contig8                             48772049  70 -  48907691 ----------------------------------------------------------------------------------ccaagcgattctcctgcctcagcctcctga-gtagctgagactacaggcacgtgcca----ccacgcccagctac-----------------------------------
i Erythrocebus_patas.Contig8                            T 4216 I 4327
s Gorilla_beringei.k141_111300                               6005 157 -     14630 agatggag--tctctctctgtcacc-aggctggagtacagt--gcacaatctgggctcactgcaacctccgcctcccggg-tccaagcgattctcctgcctcagcctcccga-gtagctgggactacaggcacgtgcca----ccacacccagctaactt--ttgtatg----------------------t
i Gorilla_beringei.k141_111300                          I 21 C 0
s Gorilla_gorilla.LT578340.1                            119653105 157 - 195582420 agatggag--tctctctctgtcacc-aggctggagtacagt--gcacaatctgggctcactgcaacctccgcctcccggg-tccaagcgattctcctgcctcagcctcccga-gtagctgggactacaggcacgtgcca----ccacacccagctaactt--ttgtatg----------------------t
i Gorilla_gorilla.LT578340.1                            I 21 C 0
s Hoolock_leuconedys.ctg903                                     9836 158 -     61166 agacggag--tctctctttgtcacc-aggctggagtacagt-ggcacaatctcagctcactgcaacctccgcctcccagg-tccaagcaattctcctgcctcagcctcctga-gtagctgggactacgggcacgtgcca----ccacgcccagctaattt--ttgtatg----------------------t
i Hoolock_leuconedys.ctg903                                I 4216 I 2119
s Hylobates_abbotti.k141_164775                               480 158 -      2073 agacggag--tctctctttgtcacc-aggctggagtacagt-ggcacaatctcagctcactgcaacctccgcctcccagg-tccaagcaattctcctgcctcagcctcctga-gcagctgggactacgggcacgtgcca----ccacgcccagctaattt--ttgtatg----------------------t
i Hylobates_abbotti.k141_164775                         I 21 C 0
s Hylobates_agilis.k141_1878600                               733 158 -      1230 agacggag--tctctctttgtcacc-aggctggagtacagt-ggcacaatctcagctcactgcaacctccgcctcccagg-tccaagcaattctcctgcctcagcctcctga-gcagctgggactacgggcacgtgcca----ccacgcccagctaattt--ttgtatg----------------------t
i Hylobates_agilis.k141_1878600                         I 21 C 0
s Hylobates_klossii.k141_183401                                33 158 -      1272 agacggag--tctctctttgtcacc-aggctggagtacagt-ggcacaatctcagctcactgcaacctccgcctcccagg-tccaagcaattctcctgcctcagcctcctga-gcagctgggactacgggcacgtgcca----ccacgcccagctaattt--ttgtatg----------------------t
i Hylobates_klossii.k141_183401                         I 21 C 0
s Hylobates_pileatus_b.ContigUN                                 14625386 158 -  25970782 agacggag--tctctctttgtcacc-aggctggagtacagt-ggcacaatctcagctcactgcaacctccgcctcccggg-tccaagcaattctcctgcctcagcctcctga-gtagctgggactacgggcacgtgcca----ccacgcccagctaattt--ttgtatg----------------------t
i Hylobates_pileatus_b.ContigUN                                I 21 C 0
s Hylobates_muelleri.k141_1389047                            2642 158 -      2977 agacggag--tctctctttgtcacc-aggctggagtacagt-ggcacaatctcagctcactgcaacctccgcctcccagg-tccaagcaattctcctgcctcagcctcctga-gtagctgggactacaggcacgtgcca----ccacgcccagctaattt--ttgtatg----------------------t
i Hylobates_muelleri.k141_1389047                       I 21 C 0
s Hylobates_pileatus_a.tarseq_592                             34545 159 -     60944 agacggag--tctctctttgtcacc-aggctggagtacagt-ggcacaatctcagctcactgcaacctccgcctcccagggtccaagcaattctcctgcctcagcctcctga-gtagctgggactacgggcacgtgcca----ccacgcccagctaattt--ttgtatg----------------------t
i Hylobates_pileatus_a.tarseq_592                         I 21 C 0
s Lophocebus_aterrimus.ctg55                             19249042 157 +  19376315 agacagag--tctctctctgtcacc-aggctggagtgcagt-ggcgcaatctcggctcactgcatcctccgcctcccagg-tccaagcgattctcctgcctcagcctcctga-gtagctgagactacaggcacgtgcca----ccacgcccagctacttt--ttgtatg-----------------------
i Lophocebus_aterrimus.ctg55                            I 21 I 2
s Macaca_arctoides.k141_2201161                             20789 157 +     74745 agacagag--tctctctctgtcacc-aggctggagtgtagt-ggcgcaatctcggctcactgcatcctccacctcccagg-tccaagtgattctcctgcctcagcctcctga-gtagctgagactacaggcacatgcca----ccacgcccagctacttt--ttgtatg-----------------------
i Macaca_arctoides.k141_2201161                         I 33 I 20
s Macaca_assamensis.Contig65                             12707246 176 +  12821369 agacagag--tctctctctgtcacc-aggctggagtgtagt-ggcgcaatctcggcacactgcatcctccacctcccagg-tccaagtgattctcctgccgcagcctcctga-gtagctgagactacaggcacatgcca----ccacgcccagctacttt--ttgtatg-gt-tt-cttttttttttttt-t
i Macaca_assamensis.Contig65                            I 33 C 0
s Macaca_cyclopis.k119_893486                                2888 178 -      3136 agacagag--tctctctctgtcacc-aggctggagtgtagt-ggcgcaatctcggctgactgcatcctccacctcccagg-tccaagtgattctcctgccgcagcctcctga-gtagctgagactacaggcacatgcca----ccacgcccagctacttt--ttgtatG-GTTTC-TTTTTTTTTTTTTTTT
i Macaca_cyclopis.k119_893486                           I 33 C 0
s Macaca_fascicularis.k141_155037                           47703 157 +     63263 agacagag--tctctctctgtcacc-aggctggagtgtagt-ggcgcagtctcggctcactgcatcctccacctcccagg-tccaagtgattctcctgcctcagcctcctga-gtagctgagactacaggcacatgcca----ccacgcccagctacttt--ttgtatg-----------------------
i Macaca_fascicularis.k141_155037                       I 33 I 12
s Macaca_fuscata.k119_599327                                 2411 157 -      2568 agacagag--tctctctctgtcacc-aggctggagtgtagt-ggcgcaatctcggctcactgcatcctccacctcccagg-tccaagtgattctcctgcctcagcctcctga-gtagctgagactacaggcacgtgcca----ccacgcccgactaattt--ttgtatt-----------------------
i Macaca_fuscata.k119_599327                            I 33 N 0
s Macaca_leonina.k141_467472                                 2984 175 -      7381 agacagag--tctctctctatcacc-aggctggagtgtagt-ggcgcaatctcggctcactgcatcctccacctcccagg-tccaagtgactctcctgcctcagcctcctga-gtagctgagactacaggcacatgcca----ccacgcccagctacttt--ttgtatg-gt-tt-ctttttttttttt--t
i Macaca_leonina.k141_467472                            I 21 C 0
s Macaca_maura.k141_251854                                  46213 178 -     79256 agacagag--tctctctctgtcacc-aggctggagtgtagt-ggcgcaatctcggctcactgcatcctccacctcccagg-tccaagtgattctcctgcctcagcctcctga-gtagctgagactacaggcacatgcca----ccacgcccagctacttt--ttgtatg-gt-ttctttttttttttttttt
i Macaca_maura.k141_251854                              I 33 C 0
s Macaca_mulatta.NC_041755.1                            196036320 178 + 196197964 agacagag--tctctctctgtcacc-aggctggagtgtagt-ggcgcaatctcggctgactgcatcctccacctcccagg-tccaagtgattctcctgccgcagcctcctga-gtagctgagactacaggcacatgcca----ccacgcccagctacttt--ttgtatg-gt-ttctttttttttttttttt
i Macaca_mulatta.NC_041755.1                            I 33 C 0
s Macaca_nemestrina.KQ004885.1                           11446490 178 +  11645122 agacagag--tctgtctctgtcacc-aggctggagtgtagt-ggcgcaatctcggctcactgcatcctccacctcccagg-tccaagtgactctcctgcctcagcctcctga-gtagctgagactacaggcacatgcca----ccacgcccagctacttt--ttgtatg-gt-ttctttttttttttttttt
i Macaca_nemestrina.KQ004885.1                          I 33 C 0
s Macaca_nigra.k141_282495                                   5160 178 -     46448 agacagag--tctctctctgtcacc-aggctggagtgtagt-ggcgcaatctcggctcactgcatcctccacctcccagg-tccaagtgattctcctgcctcaacctcctga-gtagctgagactacaggcacatgcca----ccacgcccagctacttt--ttgtatg-gt-ttctttttttttttttttt
i Macaca_nigra.k141_282495                              I 33 C 0
s Macaca_radiata.k141_3680256                                2834 176 -     13212 agacagag--tctctctctgtcacc-aggctggagtgtagt-ggcgcaatctcggctcactgcatcctccacctcccagg-tccaagtgattctcctgccgcagcctcctga-gtagctgagactacaggcacatgcca----ccacgcccagctacttt--ttgtatg-gt-tt-cttttttttttttt-t
i Macaca_radiata.k141_3680256                           I 33 C 0
s Macaca_siberu.k141_741907                                 16513 178 -     55006 agacagag--tctctctctgtcacc-aggctggagtgtagt-ggcgcaatctcggctcactgcatcctccacctcccagg-tccaagtgattctcctgcctcagcctcctga-gtagctgagactacaggcacatgcca----ccacgcccagctacttt--ttgtatg-gt-ttctttttttttttttttt
i Macaca_siberu.k141_741907                             I 33 C 0
s Macaca_silenus.Contig12                                43841621 176 +  43892939 agacagag--tctctctctgtcacctaggctggagtgcagt-ggcgcaatctcggctcactgcatcctccacctcccagg-tccaagtgattctcctgcctcagcctcctga-gtagctgagactacaggcacatgcca----ccacgcccagctacttt--ttgtatg-gt-tt-ctttttttttttt--t
i Macaca_silenus.Contig12                               I 25 C 0
s Macaca_thibetana.k99_662710                               17799 176 -     24607 agacagag--tctctctctgtcacc-aggctggagtgtagt-ggcgcaatctcggctcactgcatcctccacctcccagg-tccaagtgattctcctgccgcagcctcctga-gtagctgagactacaggcacatgcca----ccacgcccagctacttt--ttgtatg-gt-tt-tttttttttttttt-t
i Macaca_thibetana.k99_662710                           I 33 C 0
s Macaca_tonkeana.k141_2870633                               5165 178 -     27140 agacagag--tctctctctgtcacc-aggctggagtgtagt-ggcgcaatctcggctcactgcatcctccacctccccgg-tccaagtgattctcctgcctcagcctcctga-gtagctgagactacaggcacatgcca----ccacgcccagctacttt--ttgtatg-gt-ttctttttttttttttttt
i Macaca_tonkeana.k141_2870633                          I 33 C 0
s Mandrillus_leucophaeus.scaffold125                     43438209 161 -  43563597 gtacagag--tctctctctgtcacc-aggctggagtgcagt-ggcgcaatctcggctcactgcatcctccgcctcccagg-tccaagcgattct----------cctcctga-gtagctgagactacaggcacgtgcca----ccacgcccagctacttt--ttgtatg-g-gtt-ttttttttt------t
i Mandrillus_leucophaeus.scaffold125                    I 28 C 0
s Mandrillus_sphinx.Contig144                             4451029 161 -   4543643 gtacagag--tctctctctgtcacc-aggctggagtgcagt-ggcgcaatctcggctcactgtatcctccgcctcccagg-tccaagcgattct----------cctcctga-gtagctgagactacaggcacgtgcca----ccacgcccagctacttt--ttgtatg-g-gct-ttttttttt------t
i Mandrillus_sphinx.Contig144                           I 28 C 0
s Miopithecus_ogouensis.k141_2935907                         2763 179 +     29742 agacagag--tctctctctgtcacc-aggctggagtgcaga-ggcgcagtctcggctcactgcatcctccgcctcccagg-tccaagtgattctcctgcctcagcctcctga-gtagctgagactacaggcacgtgcca----tcacgcccagctacttt--ttgggtgtgtgtt-tttttttttttttttt
i Miopithecus_ogouensis.k141_2935907                    I 33 C 0
s Nasalis_larvatus.k141_153429                               9253 158 +     48152 agacagag--tctctctctgtcacc-aggctggagtgcagt-ggtgcaatctcggctcactgcaacctctgcctcctggg-tccaagcgattctactgcctcagcctcctga-gtagctgagactacaggcacatgcca----ccatgcccaggtaattt--atgtgtg----------------------t
i Nasalis_larvatus.k141_153429                          I 16 I 9
s Nomascus_annamensis.k141_720788                             640 158 -      1065 agacggag--tctctctttgtcacc-aggctggagtacagt-ggcacaatctcagctcactgcaacctccgcctcccagg-tccaagcaattctcctgcctcagcctcctga-gtagctgggactacaggcacgtgcca----ccacgcccagctaattt--ttgtatg----------------------t
i Nomascus_annamensis.k141_720788                       I 21 C 0
s Nomascus_concolor.k141_226614                              1948 158 -      5092 agacggag--tctctctttgtcacc-aggctggagtacagt-ggcacaatcttagctcactgcaacctccacttcccagg-tccaagcaattctcctgcctcagcctcctga-gtagctaggactacaggcacgtgcca----ccacgcccagctaattt--ttgtatg----------------------t
i Nomascus_concolor.k141_226614                         I 62 C 0
s Nomascus_gabriellae.k141_1004198                            511 158 +      1448 agacggag--tctctctttgtcacc-aggctggagtacagt-ggcacaatctcagctcactgcaacctccacttcccagt-tccaagcaattctcctgcctcagcctcctga-gtagctgggactacaggcacgtgcca----ccacgcccagttaattt--ttgtatg----------------------t
i Nomascus_gabriellae.k141_1004198                      I 21 C 0
s Nomascus_siki_a.k141_595747                                  3370 158 +      4512 agacggag--tctctctttgtcacc-aggctggagtacagt-ggcacaatcttagctcactgcaacctccacttcccagg-tccaagcaattctcctgcctcagcctcctga-gtagctgggactacaggcacgtgcca----ccacgcccagctaattt--ttgtatg----------------------t
i Nomascus_siki_a.k141_595747                             I 26 C 0
s Pan_paniscus.CM003386.1                               127575371 157 - 205426864 agacggag--tctctctctgtcacc-aggctggagtacagtg--cacaatctgggctcactgcaacctccgcctcctggg-tccaagcgattctcctgcctcagcctcccga-gtagctgggactacaggcacgtgcca----ccacacccagctaactt--ttgtatg----------------------t
i Pan_paniscus.CM003386.1                               I 5 C 0
s Pan_troglodytes.CM009241.2                            120152525 157 - 196562556 agacggag--tctctctctgtcacc-aggctggagtacagtg--cacaatctgggctcactgcaacctccgcctcctggg-tccaagcgattctcctgcctcagcctcctga-gtagctgggactacaggcacgtgcca----ccacacccagctaactt--ttgtatg----------------------t
i Pan_troglodytes.CM009241.2                            I 65 C 0
s Papio_anubis.CM001492.2                               188157001 170 - 188283584 agacagag--tctctctctgtcacc-aggctggagtgcagt-ggcgcaatctcagctcactgcatcctccgcctcccagg-tccaagcgattctcctgcctcagcctcctga-gtagctgagactacaggcacgtgcca----ccacgcccagctacttt--ttgtatg-gt-tt-tctttttt-------t
i Papio_anubis.CM001492.2                               I 33 C 0
s Papio_cynocephalus.k141_45376                                92 171 +     25005 agacagag--tctctctctgtcacc-aggctggagtgcagt-ggcgcaatctcggctcactgcatcctccgcctcccagg-tccaagcgattctcctgcctcagcctcctga-gtagctgagactacaggcacgtgcca----ccacgcccagctacttt--ttgtatg-g--------TTTTTTTTTTTTT
i Papio_cynocephalus.k141_45376                         N 0 C 0
s Papio_hamadryas.Contig15                               47514386 147 +  47705337 agacagag--tctctctctgtcacc-aggctggagtgcagt-ggcgcaatctcagctcactgcatcctccgcctcccagg-tccaagcgattctcctgcctcagcctcctga-gtagctgagactacaggcacgtgcca----ccacgcccagctac-----------------------------------
i Papio_hamadryas.Contig15                              I 33 I 16
s Papio_kindae.k141_5458022                                 68362 171 -    104429 agacagag--tctctctctgtcacc-aggctggagtgcagt-ggcgcaatctcggctcactgcatcctccgcctcccagg-tccaagcgattctcctgcctcagcctcctga-gtagctgagactacaggcacgtgcca----ccacgcccagctacttt--ttgtatg-g-gtt-ttttttttt------t
i Papio_kindae.k141_5458022                             I 33 C 0
s Papio_papio.k141_979496                                    6898 169 +     14967 agacagag--tctctctctgtcacc-aggctggagtgcagt-ggcgcaatctcagctcactgcatcctccgcctcccagg-tccaagcgattctcctgcctcagcctcctga-gtagctgagactacaggcacgtgcca----ccacgcccagctacttt--ttgtatgt-t-tt-ttttttt--------t
i Papio_papio.k141_979496                               I 33 C 0
s Papio_ursinus.k141_1345919                                 2757 171 -      7628 agacagag--tctctctctgtcacc-aggctggagtgcagt-ggcgcaatctcagctcactgcatcctccgcctcccagg-tccaagcgattctcctgcctcagcctcctga-gtagctgagactacaggcacgtgcca----ccacgcccagctacttt--ttgtatg-g-gtt-ttttttttt------t
i Papio_ursinus.k141_1345919                            I 33 C 0
s Piliocolobus_badius.k141_1987485                           2767 158 -      5908 agacagag--tctctctctgtcacc-atgctggagtgcagt-ggtgcaaccttggctcactgcaacctccgcctcccggg-tccaagcgattctcctgcctcagcctcctga-gtagctgagactacaggcacatgcca----ccatgcccagctaattT--GTGTGTG----------------------T
i Piliocolobus_badius.k141_1987485                      I 16 I 23
s Piliocolobus_gordonorum.k141_1270531                       3391 154 -     17985 agacagag--tctct----gtcacc-atgctggagtgcagt-ggtgcaaccttggctcactgcaacctccgcctcccggg-tccaagcgattctcctgcctcagcctcctga-gtagctgagactacaggcacatgcca----ccatgcccagctaattT--GTGTGTG----------------------T
i Piliocolobus_gordonorum.k141_1270531                  I 16 I 23
s Piliocolobus_kirkii.k141_929665                            2758 154 +      7694 agacagag--tctct----gtcacc-atgctggagtgcagt-ggtgcaaccttggctcactgcaacctccgcctcccggg-tccaagcgattctcctgcctcagcctcctga-gtagctgagactacaggcacatgcca----ccatgcccagctaattT--GTGTGTG----------------------T
i Piliocolobus_kirkii.k141_929665                       I 16 I 23
s Piliocolobus_tephrosceles.PDMG02000036.1               26741236 160 +  26888534 agacagag--tctctctctgtcacc-atgctggagtgcagt-ggtgcaaccttggctcactgcaacctccgcctcccggg-tccaagcgattctcctgcctcagcctcctga-gtagctgagactacaggcacatgcca----ccatgcccagctaatttgtgtgtgtg----------------------t
i Piliocolobus_tephrosceles.PDMG02000036.1              I 16 I 23
s Pongo_abelii.NDHI03003816.1                              187891 157 -    373494 agatggag--tctctctctgtcacc-aggctggagtaccgt--gcacaatctcggctcactgcaacctccgcctcctggg-tccaagcgattctcctgcctcagcctcccaa-gtagctgggactacaggcacgtgccg----ctacgcccagctaattt--ttgtata----------------------t
i Pongo_abelii.NDHI03003816.1                           I 21 C 0
s Pongo_pygmaeus.ctg62                                   19808539 157 +  19899266 agatggag--tctctctctgtcacc-aggctggagtaccgt--gcacaatctcggctcactgcaacctccgcctcccggg-tccaagcgattctcctgcctcagcctcccaa-gtagctgggactacaggcacgtgccg----ctacgcccagctaattt--ttgtata----------------------t
i Pongo_pygmaeus.ctg62                                  I 21 C 0
s Presbytis_comata.k141_672698                               6497 162 -     15069 agacagag--tctctctctgtcacc-aggctggagtgcagt-ggtgcaatctcagctcactgcaacctccgcctcccggg-tccaagcgattctcctgcctcagcctcctga-gtagctgagactacaggcacatgccaccatccatgcccagctaattt--ttgtgtg----------------------t
i Presbytis_comata.k141_672698                          I 16 I 9
s Presbytis_mitrata.k141_860013                              6627 158 +     14865 agacagag--tctctctctgtcacc-aggctggagtgcagt-ggtgcaatctcggctcactgcaacctccgcctcccggg-tccaagcgattctcctgcctcagcctcctga-gtagctgagactacaggcacatgcca----ccatgcccagctaattt--ttgtgtg----------------------t
i Presbytis_mitrata.k141_860013                         I 16 I 9
s Pygathrix_cinerea.k141_374971                             30618 158 +     56732 agacagac--tctctctctgtcacc-aggctggagggcagt-ggtgcaatctcggctcactgcaacctccgcctcctggg-tccaagcgattctactgcctcagcctcctga-gtagctgagactacaggcacatgcca----ccatgcccaggtaactT--GTGTGTG----------------------T
i Pygathrix_cinerea.k141_374971                         I 16 I 39
s Pygathrix_nigripes_b.ctg79                                 6807106 158 +   6970761 agacagag--tctctctctgtcacc-aggctggagggcagt-ggtgcaatctcggctcactgcaacctccgcctcctggg-tccaagcgattctactgcctcagcctcctga-gtagctgagactacaggcacatgcca----ccatgcccaggtaactT--GTGTGTG----------------------T
i Pygathrix_nigripes_b.ctg79                               I 16 I 32
s Pygathrix_nigripes_a.k141_101123                             6497 158 +     18040 agacagag--tctctctctgtcacc-aggctggagggcagt-ggtgcaatctcggctcactgcaacctccgcctcctggg-tccaagcgattctactgcctcagcctcctga-gtagctgagactacaggcacatgcca----ccatgcccaggtaactT--GTGTGTG----------------------T
i Pygathrix_nigripes_a.k141_101123                        I 16 I 34
s Rhinopithecus_bieti.k119_554384                             907 158 -     17045 agacagag--tctctctctgtcacc-aggctggagtgcagt-ggtgcaatctcggctcactgcaacctccgcctcctggg-tccaagcgattctactgcctcagcctcctga-gtagctgagattacaggcacatgcca----ccatgcccaggtaattt--ttgtgtt----------------------t
i Rhinopithecus_bieti.k119_554384                       I 16 I 21
s Rhinopithecus_roxellana.NC_044549.1                   206378384 158 - 206558726 agacagag--tctctctctgtcacc-aggctggagtgcagt-ggtgcaatctcggctcactgcaacctccgcctcctggg-tccaagcgattctactgcctcagcctcctga-gtagctgagattacaggcacatgcca----ccatgcccaggtaattt--gtgtgtg----------------------t
i Rhinopithecus_roxellana.NC_044549.1                   I 16 I 32
s Rhinopithecus_strykeri.ctg4                            44857298 158 -  45163003 agacagag--tctctctctgtcacc-aggctggagtgcagt-ggtgcaatctcggctcactgcaacctccgcctcctggg-tccaagcgattctactgcctcagcctcctga-gtagctgagattacaggcacatgcca----ccatgcccaggtaattt--gtgtgtg----------------------t
i Rhinopithecus_strykeri.ctg4                           I 16 I 20
s Semnopithecus_entellus.k141_1572367                        4110 158 +     15331 agacagag--tctctctctgtctcc-aggctggagtgcagt-ggtgcaatctcggctcactgcaacctccgcctcccggg-tccaagcgcttctcctgcctcagcctcctga-gtagctgagactacaggcacatgcca----ccatgcccagctaattT--GTGTGTG----------------------T
i Semnopithecus_entellus.k141_1572367                   I 16 I 39
s Semnopithecus_hypoleucos.k141_761524                       9503 158 +     20762 agacagag--tctctctctgtcacc-aggctggagtgcagt-ggtgcaatctcggctcactgcaacctccgcctcccggg-tccaagcgattctcctgcctcagtctcctga-gtagctgagactacaggcacatgcca----ccatgcccagctaattT--GTGTGTG----------------------T
i Semnopithecus_hypoleucos.k141_761524                  I 16 I 22
s Semnopithecus_johnii.k141_785014                         119506 158 +    130994 agacagag--tctctctctgtctcc-aggctggagtgcagt-ggtgcaatctcggctcactgcaacctccgcctcccggg-tccaagcgattctcctgcctcagcctcctga-gtagctgagactacaggcacatgcca----ccatgcccagctaatcT--GTGTGTG----------------------T
i Semnopithecus_johnii.k141_785014                      I 16 I 24
s Semnopithecus_priam.k141_410937                           38292 158 +     46263 agacagag--tctctctctgtcacc-aggctggagtgcagt-ggtgcaatctcggctcactgcaacctccgcctcccggg-tccaagcgattctcctgcctcagcctcctga-gtagctgagactacaggcacatgcca----ccatgcccagctaattT--GTGTGTG----------------------T
i Semnopithecus_priam.k141_410937                       I 16 I 16
s Semnopithecus_schistaceus.k141_387461                     31412 158 +     42640 agacagag--tctctctctgtctcc-aggctggagtgcagt-ggtgcaatctcggctcactgcaacctccgcctcccggg-tccaagcgcttctcctgcctcagcctcctga-gtagctgagactacaggcacatgcca----ccatgcccagctaattT--GTGTGTG----------------------T
i Semnopithecus_schistaceus.k141_387461                 I 16 I 41
s Semnopithecus_vetulus.k141_1143185                        14452 157 +     30600 agacagag--tctctctctgtcacc-aggctggagtgcagt-ggtgcaatctcggctcactgcaacctccgcctcccggg-tccaagcgattctcctgcctcagcctcctga-gtagctgagactacaggcac-tgcca----ccatgcccagctaattT--GTGTGTG----------------------T
i Semnopithecus_vetulus.k141_1143185                    I 16 I 24
s Symphalangus_syndactylus.tarseq_24                        15647 158 -  13920577 agacggag--tctctctttgtcacc-aggctggagtacagt-ggcacaatctcagctcactgcaacctccgcctcccagg-tccaagcaattctcctgcctcagcctcctga-gtagctgggactacgggcacgtgcca----ccacgcccagctaattt--ttgtatg----------------------t
i Symphalangus_syndactylus.tarseq_24                    I 21 C 0
s Theropithecus_gelada.CM009951.1                       194008523 176 - 194193292 agacagag--tctctctctgtcacc-aggctggagtgcagt-ggcgcaatctcggctcactgcatcctccgcctcccagg-tccaagtgattctcctgcctcagcctcctga-gtagctgagactacaggcacgtgcca----ccacgcccagctacttt--ttgtatg-gt-tt-tttttttttttttt-t
i Theropithecus_gelada.CM009951.1                       I 33 C 0
s Trachypithecus_auratus.k141_738098                        27608 158 +     38948 agacagag--tctctctctgtcacc-aggctggagtgcagt-ggtgcaatctcggctcactgcaacctccgcctcccggg-tccaagcgattctcctgcctcagcctcctga-gtagctgagactacaggcacatgcca----ccatgcccagctaattT--GTGTGTG----------------------T
i Trachypithecus_auratus.k141_738098                    I 16 I 28
s Trachypithecus_crepusculus.k141_1588528                   21340 158 -     32910 agacagag--tctctctctgtcacc-aggctggagtgcagt-ggtgcaatctcggctcactgcaacctccgcctcccggg-tccaagcgattctcctgcctcagcctcctga-gtagctgagactacaggcacatgcca----ccatgcccagctaattT--GTGTGTG----------------------T
i Trachypithecus_crepusculus.k141_1588528               I 16 I 16
s Trachypithecus_cristatus.k141_1011511                      2726 158 -     12939 agacagag--tctctctctgtcacc-aggctggagtgcagt-ggtgcaatctcggctcactgcaacctccgcctcccggg-tccaagcgattctcctgcctcagcctcctga-gtagctgagactacaggcacatgcca----ccatgcccagctaattT--GTGTGTG----------------------T
i Trachypithecus_cristatus.k141_1011511                 I 16 I 44
s Trachypithecus_francoisi.k141_768164                       2662 158 -     14244 agacagag--tctctctctgtcacc-aggctggagtgcagt-ggtgcaatctcggctcactgcaacctccgcctcccggg-tccaagcgattctcctgcctcagcctcctga-gtagctgagactacaggcacatgcca----ccatgcccagctaattT--GTGTGTG----------------------T
i Trachypithecus_francoisi.k141_768164                  I 16 I 24
s Trachypithecus_geei.k141_670367                           44061 158 -     54611 agacagag--tctctctctgtcacc-aggctggagtgcagt-ggtgcaatctcggctcactgcaacctccgcctcccggg-tccaagcgattctcctgcctcagcctcctga-gtagctgagactacaggcacatgcca----ccatgcccagctaattT--GTGTGTG----------------------T
i Trachypithecus_geei.k141_670367                       I 16 I 22
s Trachypithecus_germaini.k141_868450                        1864 158 -     11566 agacagag--tctctctctgtcacc-aggctggagtgcagt-ggtgcaatctcggctcactgcaacctccgcctcccggg-tccaagcgattctcctgcctcagcctcctga-gtagctgagactacaggcacgtgcca----ccatgcccagctaattT--GTGTGTG----------------------T
i Trachypithecus_germaini.k141_868450                   I 16 I 18
s Trachypithecus_hatinhensis.k141_504423                     4041 158 -     15592 agacagag--tctctctctgtcacc-aggctggagtgcagt-ggtgcaatctcggctcactgcaacctccgcctcccggg-tccaagcgattctcctgcctcagcctcctga-gtagctgagactacaggcacatgcca----ccatgcccagctaattT--GTGTGTG----------------------T
i Trachypithecus_hatinhensis.k141_504423                I 16 I 22
s Trachypithecus_laotum.k141_760702                          2697 158 +     14371 agacagag--tctctctctgtcacc-aggctggagtgcagt-ggtgcaatctcggctcactgcaacctccgcctcccggg-tccaagcgattctcctgcctcagcctcctga-gtagctgagactacaggcacatgcca----ccatgcccagctaattT--GTGTGTG----------------------T
i Trachypithecus_laotum.k141_760702                     I 16 I 18
s Trachypithecus_leucocephalus.k141_381681                    978 158 +     12481 agacagag--tctctctctggcacc-aggctggagtgcagt-ggtgcaatctcggctcactgcaacctccgcctcccggg-tccaagcgattctcctgcctcagcctcctga-gtagctgagactacaggcacatgcca----ccatgcccagctaattT--GTGTGTG----------------------T
i Trachypithecus_leucocephalus.k141_381681              I 16 I 24
s Trachypithecus_melamera.k141_699241                         854 158 -     24393 agacagag--tctctctctgtcacc-aggctggagtgcagt-ggtgcaatctcggctcactgcaacctccgcctcccggg-tccaagcgattctcctgcctcagcctcctga-gtagctgagactacaggcacatgcca----ccatgcccagctaattT--GTGTGTG----------------------T
i Trachypithecus_melamera.k141_699241                   I 16 I 22
s Trachypithecus_obscurus.k141_1115109                       6100 158 -     28054 agacagag--tctctctctgtcacc-aggctggagtgcagt-ggtgcaatctcggctcactgcaacctccgcctcccggg-tccaagcgattctcctgcctcagcctcctga-gtagctgagactacaggcacctgcca----ccatgcccagctaaTGT--GTGTGTG----------------------T
i Trachypithecus_obscurus.k141_1115109                  I 16 I 25
s Trachypithecus_phayrei.ctg3                            44660900 158 -  44834318 agacagag--tctctctctgtcacc-aggctggagtgcagt-ggtgcaatctcggctcactgcaacctccgcctcccggg-tccaagcgattctcctgcctcagcctcctga-gtagctgagactacagacacatgcca----ccatgcccagctaattt--gtgtgtg----------------------t
i Trachypithecus_phayrei.ctg3                           I 16 I 10
s Trachypithecus_pileatus.k141_1022309                       3208 158 +     13828 agacagag--tctctctctgtcacc-aggctggagtgcagt-ggtgcaatctcggctcactgcaacctccgcctcccggg-tccaagcgattctcctgcctcagcctcctga-gtagctgagactacaggcacatgcca----ccatgcccagctaattT--GTGTGTG----------------------T
i Trachypithecus_pileatus.k141_1022309                  I 16 I 18
e Eptesicus_fuscus.JH977687.1                             4707549   0 +   6522550 C
e Macroglossus_sobrinus.MacSob_scaffold_879                701732  90 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             39436   0 -     47444 C
e Petromus_typicus.PetTyp_scaffold_33007                    14226   0 -     36578 C
e Sorex_araneus.JH798170.1                               17767061   0 -  27805282 C
e Dinomys_branickii.DinBra_scaffold_1996                   157598   0 +    228994 C
e Erinaceus_europaeus.JH835290.1                         11534859   0 +  16010500 C
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           3364   0 -      6963 C
e Aplodontia_rufa.AprRuf_scaffold_156013                     4258  12 +      5067 I
e Oryctolagus_cuniculus.CM000803.1                      141876917   0 + 163896628 C
e Ochotona_princeps.JH802095.1                            4996634   0 -  23139505 C
e Lepus_americanus.LepAme_scaffold_62849                    13880   0 +     22452 C
e Perognathus_longimembris.PerPac_flattened_line_19359        641   5 +     49596 I
e Dipodomys_stephensi.DipSte_scaffold_44365                 28610   0 +     28912 C
e Dipodomys_ordii.KN672545.1                              3656967   0 +   4240102 C
e Suricata_suricatta.SurSur_flattened_line_20339            28181   0 +     62062 C
e Ziphius_cavirostris.ZipCav_flattened_line_127025           7520   0 -      8775 C
e Zalophus_californianus.ZalCal_flattened_line_4097        214889   0 -    227762 C
e Vulpes_lagopus.VulLag_flattened_line_2045                138908   0 -    281493 C
e Vicugna_pacos.KN269600.1                                1525269   0 -   2331223 C
e Ursus_maritimus.KK498671.1                              6515415   0 +  28682327 C
e Uropsilus_gracilis.UroGra_scaffold_69449                   1920   0 +     10241 C
e Tursiops_truncatus.MRVK01000923.1                      69314021   0 -  96451834 C
e Trichechus_manatus.JH594618.1                          16085939   0 +  31416278 C
e Tragulus_javanicus.TraJav_scaffold_14717                   5750   0 +     90398 C
e Tonatia_saurophila.TonSau_scaffold_3334                  136665   0 -    259118 C
e Tolypeutes_matacus.TolMat_scaffold_269431                  6100   0 +      6782 C
e Tapirus_terrestris.TapTer_scaffold_14939                  58440   0 +     99546 C
e Tapirus_indicus.TapInd_scaffold_176                      807728   0 +   1148477 C
e Tamandua_tetradactyla.TamTet_scaffold_26877               15294   0 +     45698 C
e Tadarida_brasiliensis.TadBra_scaffold_61492                 878   0 +     20549 C
e Sus_scrofa.CM000824.4                                 189272699   0 + 218635234 C
e Spilogale_gracilis.SpiGra_flattened_line_905             235418   0 -    276980 C
e Solenodon_paradoxus.SolPar_flattened_line_1012            19485  11 +    739146 I
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   32880   0 -    114521 C
e Saiga_tatarica.SaiTat_scaffold_82192                       8546   0 +     12214 C
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                19923   0 +    109198 C
e Rhinolophus_sinicus.LVEH01000179.1                      1788458   0 +   2252614 C
e Rangifer_tarandus.RanTarSib_scaffold_24239                16389   0 +     68503 C
e Puma_concolor.QAVW01000427.1                          131534966   0 - 161321710 C
e Pteropus_vampyrus.KN525959.1                             604541   0 -   3946241 C
e Pteropus_alecto.KB031157.1                             13246590   0 -  17261082 C
e Pteronura_brasiliensis.PteBra_flattened_line_1343        247294   0 -    344369 C
e Pteronotus_parnellii.KE867983.1                            4678   0 -     27784 C
e Procavia_capensis.ProCapCap_scaffold_149274                2467 1156 -      9567 I
e Platanista_gangetica.PlaMin_flattened_line_72990           5996   0 +     21690 C
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Phocoena_phocoena.PhoPho_flattened_line_11948            121909   0 -    122454 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    116408   0 -    135482 C
e Pantholops_hodgsonii.KE114631.1                         1066721   0 -   1292953 C
e Panthera_tigris.KE721879.1                              5028371   0 -   6340057 C
e Panthera_pardus.KV860323.1                              3638695   0 +  18214204 C
e Panthera_onca.PanOnc_flattened_line_1615                  34945   0 +    295523 C
e Ovis_canadensis.OviCan_scaffold_6251                      79086   0 +    140051 C
e Ovis_aries.CM001582.2                                 134077871   0 - 275406953 C
e Otocyon_megalotis.JAEUCK010005121.1                      308812   0 -    505867 C
e Orycteropus_afer.OryAfe_flattened_line_13509              60549   0 -     66828 C
e Orcinus_orca.KB316965.1                                 7225305   0 -   7562323 C
e Okapia_johnstoni.LVCL01S0017931.1                         37593   0 +     78940 C
e Odocoileus_virginianus.KZ101650.1                       1080275   0 +   1425656 C
e Odobenus_rosmarus.KB229369.1                             680162   0 -   3126709 C
e Nyctereutes_procyonoides.CAJHUB010000786.1                31528   0 +   3668941 C
e Noctilio_leporinus.NocLep_scaffold_12062                  50214  77 +     94413 I
e Neophocaena_asiaeorientalis.KZ688543.1                  3951620   0 -   4490290 C
e Neomonachus_schauinslandi.NINY01007774.1                4485495   0 -  14209539 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             5628   0 -      8794 C
e Myotis_myotis.MyoMyo_scaffold_6123                        12401   0 +     66751 C
e Myotis_lucifugus.GL429887.1                             3467158   0 -   3747815 C
e Myotis_davidii.KB114863.1                               5021080   0 +   6462685 C
e Myotis_brandtii.KE161952.1                               969656   0 +   8389877 C
e Mustela_putorius.JH417978.1                             4424983   0 -  28371801 C
e Murina_feae.MurFea_scaffold_2254                          22038   0 -    100666 C
e Mungos_mungo.MunMun_flattened_line_8729                  145521   0 -    168139 C
e Moschus_moschiferus.MosMos_scaffold_78805                  2095   0 -     19904 C
e Mormoops_blainvillei.MorMeg_scaffold_2952                162039   0 +    265003 C
e Monodon_monoceros.MonMon_M_scaffold_5598                 147008   0 +    154973 C
e Mirounga_angustirostris.MirAng_flattened_line_8852        12105   0 -    104932 C
e Miniopterus_schreibersii.MinSch_scaffold_24116            35177   0 +     45743 C
e Miniopterus_natalensis.LDJU01000022.1                   8210688   0 +  10048721 C
e Micronycteris_hirsuta.MicHir_scaffold_37978               23515   0 -     32043 C
e Microgale_talazaci.MicTal_scaffold_34660                  35528   0 -     48017 C
e Mesoplodon_bidens.MesBid_scaffold_227248                    907   0 -      1377 C
e Mellivora_capensis.MelCap_flattened_line_15433             1615   0 -     87323 C
e Megaderma_lyra.MegLyr_scaffold_3562                       64783 239 -    234502 I
e Manis_pentadactyla.KN017078.1                             36816   0 +     58827 C
e Manis_javanica.JSZB01003966.1                            146673   0 +    252755 C
e Lycaon_pictus.CM007556.1                               11088727   0 +  39895028 C
e Loxodonta_africana.GL010040.1                          20595417   0 -  62548349 C
e Lipotes_vexillifer.KE558548.1                            136580   0 +   3060487 C
e Leptonychotes_weddellii.KB714749.1                      3086589   0 -   3498232 C
e Lasiurus_borealis.LasBor_scaffold_59542                    4384   0 +     26176 C
e Kogia_breviceps.KogBre_flattened_line_35920               24230   0 +     37189 C
e Inia_geoffrensis.IniGeo_flattened_line_66725               9623   0 +     17520 C
e Hyaena_hyaena.HyaHya_flattened_line_20729                 17893   9 -     67322 I
e Hipposideros_galeritus.HipGal_scaffold_104691              8154 325 -      9143 I
e Hipposideros_armiger.JXIK01001085.1                      279004   0 -    477199 C
e Hippopotamus_amphibius.HipAmp_scaffold_1308              147723   0 +    277961 C
e Heterohyrax_brucei.HetBruBak_scaffold_25354               61360 1157 +     73687 I
e Hemitragus_hylocrius.HemHyl_scaffold_16669                28080   0 -     91191 C
e Helogale_parvula.HelPar_flattened_line_22962              17826   0 +     53719 C
e Giraffa_tippelskirchi.LVKQ01S012154.1                    181865   0 -    189561 C
e Felis_nigripes.FelNig_flattened_line_8080                 21802   0 +     52776 C
e Felis_catus_fca126.CM031420.1                         129280662   0 - 158578461 C
e Eubalaena_japonica.EubJap_flattened_line_7756             62087   0 +     89355 C
e Eschrichtius_robustus.EscRob_flattened_line_685          315634   0 +    330699 C
e Equus_przewalskii.ATBW01073585.1                          13576   0 +     92910 C
e Equus_caballus.CM000402.2                              13352087   0 +  41866177 C
e Equus_asinus.JREZ01000062.1                             5853582   0 -   7175178 C
e Enhydra_lutris.KZ291749.1                              85872803   0 +  99434291 C
e Elephantulus_edwardii.JH947210.1                        7816992 12417 +  15467074 I
e Elaphurus_davidianus.JRFZ01086400.1                     1492060   0 +   1727528 C
e Eidolon_helvum.KE772537.1                                 12858   0 +     24177 C
e Echinops_telfairi.JH980316.1                           22999536   0 -  44670279 C
e Diceros_bicornis.DicBicMic_scaffold_9545                   3794   0 +    151128 C
e Dicerorhinus_sumatrensis.PEKH010003161.1                 323142   0 +    993696 C
e Desmodus_rotundus.KZ672188.1                           18699611   0 -  18957592 C
e Delphinapterus_leucas.KZ290064.1                       80037418   0 -  96802777 C
e Dasypus_novemcinctus.JH568778.1                          184239   0 -   6883506 C
e Cryptoprocta_ferox.CryFer_flattened_line_19014            52628   0 -     70449 C
e Crocidura_indochinensis.CroInd_scaffold_848148              199   0 +      1327 C
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1008 325 -      5782 I
e Condylura_cristata.JH655880.1                          60614198   0 +  78930452 C
e Choloepus_hoffmanni.KN194586.1                           762369   0 +    964067 C
e Choloepus_didactylus.ChoDid_scaffold_36182                17064   0 -     21363 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_160623         4247   0 -      9338 C
e Catagonus_wagneri.CatWag_scaffold_1305                   159479   0 -    276539 C
e Carollia_perspicillata.CarPer_scaffold_4436               60326   0 +     67245 C
e Capra_hircus.CM004562.1                               135707023   0 - 157403528 C
e Capra_aegagrus.CM003214.1                              21325795   0 + 157394656 C
e Canis_lupus_orion.HG994411.1                           16456286   0 -  44759192 C
e Canis_lupus_familiaris.chr31                           11089271   0 +  39895921 C
e Canis_lupus_dingo.QKWQ01001993.1                       11266737   0 -  35597290 C
e Canis_lupus_VD.CanFam_VD_scaffold_16982                   15096   0 +     87036 C
e CanFam4.chr31                                          11520070   0 +  39901454 C
e Camelus_ferus.KB016973.1                                2973602   0 +   6889770 C
e Camelus_dromedarius.KN271192.1                           397866   0 -  15254737 C
e Camelus_bactrianus.KN276303.1                           3220165   0 -   8989139 C
e Bubalus_bubalis.KI419065.1                              1233374   0 -   1914593 C
e Bos_taurus.CM000177.6                                 136296294   0 - 158972876 C
e Bos_mutus.JH883513.1                                     573102   0 -    998990 C
e Bos_indicus.CM003021.1                                138140561   0 - 161108492 C
e Bison_bison.KN264915.1                                  6560446   0 +   6870073 C
e Beatragus_hunteri.BeaHun_scaffold_21644                   43830   0 -     72089 C
e Balaenoptera_bonaerensis.DF502048.1                        5966   0 -     13118 C
e Balaenoptera_acutorostrata.KI537095.1                  26380794   0 +  51448160 C
e Artibeus_jamaicensis.ArtJam_scaffold_41619                 9539   0 -     29036 C
e Antilocapra_americana.AntAmePen_scaffold_42841            31302   0 +     33004 C
e Anoura_caudifer.AnoCau_scaffold_422                      391119   0 -    631301 C
e Ammotragus_lervia.NIVO01013474.1                        3520720   0 +   4113121 C
e Ailurus_fulgens.LNAC01000003.1                          7095279   0 -  16596857 C
e Ailuropoda_melanoleuca.LNAT01000321.1                  10657927   0 +  23371972 C
e Acinonyx_jubatus.LLWD01000356.1                         2034611   0 +   3721120 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19596   0 -    119109 C
e Glis_glis.GliGli_scaffold_79770                           14364   0 -     18683 C
e Zapus_hudsonius.ZapHud_scaffold_64392                     16436   0 -     20485 C
e Jaculus_jaculus.JH725517.1                              8566539   0 +  11848649 C
e Allactaga_bullata.AllBul_scaffold_70162                   17525   0 -     22067 C
e Galeopterus_variegatus.GalVar_scaffold_354               156907   0 +    324696 C
e Microtus_ochrogaster.CM001673.1                        22820341   4 -  98408828 I
e Xerus_inauris.XerIna_scaffold_7898                       127482   5 -    134049 I
e Varecia_variegata.k141_775891                             25501   3 -     33872 I
e Varecia_rubra.k141_432109                                  5966   3 -     20643 I
e Tupaia_tana.TupTan_flattened_line_68454                    5906   0 +     13056 C
e Tupaia_chinensis.KB320831.1                             2793720   0 -   3938065 C
e Tarsius_wallacei.k141_48636                               60408   0 +     65473 C
e Tarsius_lariang.k141_609102                               27092   0 +     42269 C
e Spermophilus_dauricus.KZ294190.1                        2240365   5 +   2842873 I
e Sigmodon_hispidus.SigHis_scaffold_11332                  100871   0 -    120886 C
e Sapajus_macrocephalus.k141_966464                         21380   0 -     62485 C
e Sapajus_apella.ctg10                                   17342019   0 -  30362882 C
e Saimiri_ustus.k141_1282476                                 5292   0 -     76454 C
e Saimiri_sciureus.k141_1947592                              5355   0 +     60816 C
e Saimiri_oerstedii.k141_841116                              5377   0 +     67014 C
e Saimiri_macrodon.k141_2087127                              5284   0 -     60842 C
e Saimiri_cassiquiarensis.k141_808270                        5342   0 +     34089 C
e Saimiri_boliviensis.NW_024100938.1                     15673429   0 -  43202129 C
e Rattus_norvegicus.chr11                                13915860 1475 +  90463843 I
e Psammomys_obesus.NESX01026517.1                           36081   2 +     77221 I
e Propithecus_verreauxi.k141_158021                         39953   3 -     48185 I
e Propithecus_tattersalli.k141_907138                       17689   3 -     53241 I
e Propithecus_perrieri.k141_7554                            18055   3 +     27322 I
e Propithecus_edwardsi.k141_1317105                         36132   3 -     44753 I
e Propithecus_diadema.k141_577245                           43745   3 +     52369 I
e Propithecus_coronatus.k141_1353159                         4402   3 +     11805 I
e Propithecus_coquerelli.NW_012147863.1                     19492   3 -     30946 I
e Prolemur_simus.MPIZ01000048.1                           6849325   3 +  12164890 I
e Plecturocebus_moloch.k141_890597                          24007   0 -     75465 C
e Plecturocebus_miltoni.k141_841561                         13420   0 +    134592 C
e Plecturocebus_hoffmannsi.k141_985533                       1414   0 -    119457 C
e Plecturocebus_grovesi.k141_242819                         23697   0 +    152463 C
e Plecturocebus_dubius.k141_3565563                          4343   0 -     55515 C
e Plecturocebus_cupreus.k141_1145860                          260   0 -     43940 C
e Plecturocebus_cinerascens.k141_744510                     23624   0 +    147771 C
e Plecturocebus_caligatus.k141_2539816                      14024   0 -     98129 C
e Plecturocebus_brunneus.k141_498086                        23784   0 +     67491 C
e Plecturocebus_bernhardi.k141_959214                       23572   0 +     44506 C
e Pithecia_vanzolinii.k141_831006                           14232   0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13475329   0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          6329   0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        13101   0 -     16101 C
e Pithecia_hirsuta.k141_1152968                              9902   0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        25855   0 +     78826 C
e Pithecia_albicans.k141_991845                             44470   0 -     61926 C
e Peromyscus_maniculatus.KI615518.1                       4950937   0 -   8017169 C
e Perodicticus_potto.k141_713187                            25474   3 -     27972 I
e Perodicticus_ibeanus.k141_117958                           6160   3 -     23713 I
e Otolemur_garnettii.GL873528.1                          18009456   3 -  38779656 I
e Otolemur_crassicaudatus.k141_505435                        1475   3 -     53940 I
e Onychomys_torridus.OnyTor_scaffold_12578                  37690   6 +     62360 I
e Ondatra_zibethicus.OndZib_scaffold_6821                  125594   4 +    145789 I
e Octodon_degus.JH651621.1                                3686495   0 +  10294119 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65670190   0 +  89412551 C
e Nycticebus_coucang.k141_2051882                            4581   0 +      6470 C
e Nycticebus_bengalensis.LG16                            65567855   0 -  95554990 C
e Nannospalax_galili.KL201303.1                            119159   6 +    362372 I
e Myocastor_coypus.MyoCoy_scaffold_3653                     91001   0 -    117718 C
e Muscardinus_avellanarius.MusAve_scaffold_9643             12869   0 +     98495 C
e Mus_spretus.CM004110.1                                 74333150   0 +  97876770 C
e Mus_pahari.LT608305.1                                  67556618   0 +  89017189 C
e Mus_musculus.chr16                                     75490415   0 +  98207768 C
e Mus_caroli.LT608236.1                                  70767338   0 +  92629107 C
e Mirza_zaza.k141_226143                                     6369   3 +      8497 I
e Microcebus_murinus.CM007691.1                          16510980   3 +  47401472 I
e Mesocricetus_auratus.KB708139.1                         1047499   8 -  26018355 I
e Meriones_unguiculatus.MerUng_scaffold_52233               13799   2 +     15977 I
e Marmota_marmota.CZRN01000005.1                         36874268   5 +  64221397 I
e Loris_tardigradus.ctg97                                 3779150   0 +   6799190 C
e Loris_lydekkerianus.k141_550999                           11401   0 +     84689 C
e Lepilemur_septentrionalis.k141_578524                     32347   3 -     33031 I
e Lepilemur_ruficaudatus.k141_617879                        79356   3 +    116806 I
e Lepilemur_dorsalis.k141_134267                            54094   3 +     63517 I
e Lepilemur_ankaranensis.k141_884009                        24708   3 +     39228 I
e Lemur_catta.scaffold_1                                258407958   3 - 285822530 I
e Lagothrix_lagothricha.k141_12968                          50864   0 -    147782 C
e Indri_indri.k141_5141390                                   1122   3 -      3181 I
e Ictidomys_tridecemlineatus.JH393315.1                   7126449   5 +  13083262 I
e Hystrix_cristata.HysCri_scaffold_50788                     6758   0 +     22540 C
e Heterocephalus_glaber.JH602058.1                        2551694   0 +  31725842 C
e Hapalemur_occidentalis.k141_797938                        46279   3 -     54384 I
e Hapalemur_meridionalis.k141_186231                        29651   3 -     42470 I
e Hapalemur_griseus.k141_1387522                             6402   3 +     56096 I
e Hapalemur_gilberti.k141_279011                             1076   3 -     11661 I
e Hapalemur_alaotrensis.k141_1280836                         2596   3 +     10286 I
e Graphiurus_murinus.GraMur_scaffold_4493                   77863   0 +    118900 C
e Galagoides_demidoff.k141_1769638                          11100   3 +     27357 I
e Galago_senegalensis.k141_964197                           14034   3 -     43889 I
e Galago_moholi.ctg555                                     211660   3 -    847004 I
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I
e Eulemur_sanfordi.k141_186399                              16595   3 -     29447 I
e Eulemur_rufus.k141_1620292                                33869   3 +     46535 I
e Eulemur_rubriventer.k141_411740                           19131   3 +     26808 I
e Eulemur_mongoz.k141_825972                                16675   3 +     27497 I
e Eulemur_fulvus.k141_653297                                12015   3 +    109717 I
e Eulemur_flavifrons.k141_903901                             8537   3 +     60246 I
e Eulemur_coronatus.k141_3240342                            12216   3 +     36558 I
e Eulemur_collaris.k141_311830                               5742   3 -      6809 I
e Eulemur_albifrons.k141_715837                              5810   3 +     13586 I
e Ellobius_talpinus.LOJH01090055.1                           7151   4 -      7838 I
e Ellobius_lutescens.LOEQ01003611.1                        240029   1 -    369425 I
e Dolichotis_patagonum.DolPat_scaffold_14102                36687   0 -     73477 C
e Daubentonia_madagascariensis.ctg11                     16845635   3 +  31942871 I
e Dasyprocta_punctata.DasPun_flattened_line_634             59461   0 -    236241 C
e Cuniculus_paca.CunPac_flattened_line_16637                18370   0 +     26546 C
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 31676   0 -     67205 C
e Ctenodactylus_gundi.CteGun_scaffold_447                  209031   0 -    956709 C
e Cricetulus_griseus.LT883672.1                          53029812  13 +  72327488 I
e Cricetomys_gambianus.CriGam_scaffold_949                 279153   0 -    399297 C
e Chiropotes_sagulatus.k141_773804                          16013   0 +     40510 C
e Chiropotes_israelita.k141_1189915                         71833   0 +    196370 C
e Chinchilla_lanigera.JH721867.1                         15962331   0 +  43084221 C
e Cheracebus_torquatus.k141_315545                          47026   0 +     54541 C
e Cheracebus_regulus.k141_2128895                           42347   0 +     57117 C
e Cheracebus_lugens.k141_203936                             23307   0 +     25473 C
e Cheracebus_lucifer.k141_619653                             6289   0 -     18223 C
e Cheirogaleus_medius.k141_133808                            8812   3 +     13308 I
e Cheirogaleus_major.k141_1157592                           59764   3 -     68416 I
e Cephalopachus_bancanus.k141_702587                         8664   0 +     21754 C
e Cebus_unicolor.k141_239009                                13261   0 +     25043 C
e Cebus_olivaceus.k141_93739                                 9018   0 -     26817 C
e Cebus_albifrons.Contig22                               18891474   0 -  29618158 C
e Cavia_tschudii.CavTsc_scaffold_488                       177368   0 +    436027 C
e Cavia_porcellus.DS562889.1                             15799177   0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15787241   0 -  24422027 C
e Castor_canadensis.CasCan_scaffold_47037                   31717   7 +     33760 I
e Carlito_syrichta.NW_007248099.1                          309640   0 +    345090 C
e Cacajao_melanocephalus.k141_1160263                        8247   0 -    134917 C
e Cacajao_hosomi.k141_303789                                15704   0 -    216513 C
e Cacajao_calvus.k141_96166                                 13661   0 +    125063 C
e Cacajao_ayresi.k141_724503                               114632   0 -    171031 C
e Avahi_peyrierasi.k141_798820                               1105   3 +      6337 I
e Avahi_laniger.k141_2840928                                 7489   3 -     16375 I
e Ateles_paniscus.k141_1631200                               6745   0 -     25888 C
e Ateles_marginatus.k141_899112                             64774   0 +    119057 C
e Ateles_geoffroyi_a.k141_1300742                             16782   0 -     58268 C
e Ateles_chamek.k141_1072810                                12279   0 +     89302 C
e Ateles_belzebuth.k141_1348307                             61266   0 +     85812 C
e Ateles_geoffroyi_b.tarseq_2582                             9539995   0 +  39197703 C
e Arctocebus_calabarensis.k141_587554                        1753   3 +      9265 I
e Aotus_vociferans.k141_718647                               6726   0 +     23246 C
e Aotus_trivirgatus.k141_1740727                             6724   0 -    104377 C
e Aotus_nancymaae.KZ196176.1                              5750135   0 +   9889416 C
e Aotus_griseimembra.k141_3275623                            6178   0 +     22701 C
e Aotus_azarae.k141_3170768                                 63236   0 +     78111 C
e Alouatta_seniculus.k141_1531728                             741   0 -      1692 C
e Alouatta_puruensis.k141_1284840                            4606   0 -      4927 C
e Alouatta_palliata.k141_2764429                              526   0 -      1480 C
e Alouatta_nigerrima.k141_3537692                             613   0 +      1660 C
e Alouatta_macconnelli.k141_2177643                           564   0 -      1868 C
e Alouatta_juara.k141_1244470                                1180   0 +      2129 C
e Alouatta_discolor.k141_811576                             11557   0 -     21359 C
e Alouatta_caraya.k141_1710068                                601   0 +      1555 C
e Alouatta_belzebul.k141_1818029                            10884   0 -     18050 C
e Acomys_cahirinus.AcoCah_scaffold_1625                    113354   2 -    189883 I
e Nomascus_siki_b.tarseq_80                             25641  26 -  18771707 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               14452 2 +    209709 tt
s Allenopithecus_nigroviridis.k141_2469532                   2185 2 -     60446 tt
i Allenopithecus_nigroviridis.k141_2469532              C 0 I 1
s Allochrocebus_lhoesti.k141_3566948                         2900 2 -     29318 tt
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         1836 2 +     38766 tt
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          2794 2 -     80423 tt
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Cercocebus_atys.KQ010443.1                              6556126 2 +   6739814 tt
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      27603 2 +     60454 tt
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          2809 2 -     21101 tt
i Cercocebus_lunulatus.k141_4634644                     C 0 I 1
s Cercocebus_torquatus.k141_3969582                         60118 2 -    107033 tt
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        3002 2 -     17608 tt
i Cercopithecus_ascanius.k141_4123525                   C 0 I 1
s Cercopithecus_cephus.k141_3893260                           161 2 +     45019 TT
i Cercopithecus_cephus.k141_3893260                     C 0 I 1
s Cercopithecus_diana.k141_2561715                            245 2 +     15177 tt
i Cercopithecus_diana.k141_2561715                      C 0 I 1
s Cercopithecus_hamlyni.k141_129805                          3045 2 +     16677 tt
i Cercopithecus_hamlyni.k141_129805                     C 0 I 1
s Cercopithecus_lowei.k141_623764                           25214 2 +     35983 tt
i Cercopithecus_lowei.k141_623764                       C 0 I 1
s Cercopithecus_albogularis.ctg51                              11991743 2 +  12117833 tt
i Cercopithecus_albogularis.ctg51                             C 0 I 1
s Cercopithecus_mona.ctg12                               46478500 2 +  46592721 tt
i Cercopithecus_mona.ctg12                              C 0 I 1
s Cercopithecus_neglectus.k141_2078027                      42055 2 -     45581 tt
i Cercopithecus_neglectus.k141_2078027                  C 0 I 1
s Cercopithecus_nictitans.k141_1129315                       3057 2 +     35577 tt
i Cercopithecus_nictitans.k141_1129315                  C 0 I 1
s Cercopithecus_pogonias.k141_3109732                        2810 2 -     17744 tt
i Cercopithecus_pogonias.k141_3109732                   C 0 I 1
s Cercopithecus_roloway.k141_2263608                        22415 2 +     37128 tt
i Cercopithecus_roloway.k141_2263608                    C 0 I 1
s Chlorocebus_aethiops.ctg22                             15140410 2 -  15256731 tt
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      35019 2 -     53260 tt
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101145578 2 + 101219884 tt
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Colobus_guereza.LG08                                  147665501 2 + 156195979 tt
i Colobus_guereza.LG08                                  I 17 C 0
s Colobus_polykomos.k141_1406057                            17483 2 +     23629 tt
i Colobus_polykomos.k141_1406057                        I 12 C 0
s Erythrocebus_patas.Contig8                             48776446 1 -  48907691 -t
i Erythrocebus_patas.Contig8                            I 4327 I 1144
s Gorilla_beringei.k141_111300                               6162 2 -     14630 tt
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119653262 2 - 195582420 tt
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Hoolock_leuconedys.ctg79                                      5855 2 -   7690867 tt
i Hoolock_leuconedys.ctg79                                 I 184 C 0
s Hylobates_abbotti.k141_164775                               638 2 -      2073 tt
i Hylobates_abbotti.k141_164775                         C 0 C 0
s Hylobates_agilis.k141_1878600                               891 2 -      1230 tt
i Hylobates_agilis.k141_1878600                         C 0 I 122
s Hylobates_klossii.k141_183401                               191 2 -      1272 tt
i Hylobates_klossii.k141_183401                         C 0 I 122
s Hylobates_pileatus_b.ContigUN                                 14625544 2 -  25970782 tt
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            2800 2 -      2977 tt
i Hylobates_muelleri.k141_1389047                       C 0 I 122
s Hylobates_pileatus_a.tarseq_592                             34704 2 -     60944 tt
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19249201 2 +  19376315 tt
i Lophocebus_aterrimus.ctg55                            I 2 C 0
s Macaca_assamensis.Contig65                             12707422 2 +  12821369 tt
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_893486                                3066 2 -      3136 TT
i Macaca_cyclopis.k119_893486                           C 0 N 0
s Macaca_leonina.k141_467472                                 3159 1 -      7381 t-
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  46391 2 -     79256 tt
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196036498 2 + 196197964 tt
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11446668 2 +  11645122 tt
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   5338 2 -     46448 tt
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                3010 2 -     13212 tt
i Macaca_radiata.k141_3680256                           C 0 I 2
s Macaca_siberu.k141_741907                                 16691 1 -     55006 t-
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43841797 1 +  43892939 t-
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               17975 2 -     24607 tt
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               5343 2 -     27140 tt
i Macaca_tonkeana.k141_2870633                          C 0 I 1
s Mandrillus_leucophaeus.scaffold125                     43438370 2 -  43563597 tt
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4451190 2 -   4543643 tt
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         2942 2 +     29742 tt
i Miopithecus_ogouensis.k141_2935907                    C 0 I 1
s Nasalis_larvatus.k141_153429                               9420 1 +     48152 -t
i Nasalis_larvatus.k141_153429                          I 9 C 0
s Nomascus_annamensis.k141_720788                             798 2 -      1065 tt
i Nomascus_annamensis.k141_720788                       C 0 I 122
s Nomascus_concolor.k141_226614                              2106 2 -      5092 tt
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_1004198                            669 2 +      1448 tt
i Nomascus_gabriellae.k141_1004198                      C 0 C 0
s Nomascus_siki_a.k141_595747                                  3528 2 +      4512 tt
i Nomascus_siki_a.k141_595747                             C 0 I 122
s Pan_paniscus.CM003386.1                               127575528 2 - 205426864 tt
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120152682 2 - 196562556 tt
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Papio_anubis.CM001492.2                               188157171 2 - 188283584 tt
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                               263 2 +     25005 TT
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47514549 2 +  47705337 tt
i Papio_hamadryas.Contig15                              I 16 C 0
s Papio_kindae.k141_5458022                                 68533 2 -    104429 tt
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    7067 2 +     14967 tt
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 2928 2 -      7628 tt
i Papio_ursinus.k141_1345919                            C 0 C 0
s Piliocolobus_badius.k141_1987485                           2948 2 -      5908 Tt
i Piliocolobus_badius.k141_1987485                      I 23 C 0
s Piliocolobus_gordonorum.k141_1270531                       3568 2 -     17985 Tt
i Piliocolobus_gordonorum.k141_1270531                  I 23 I 2
s Piliocolobus_kirkii.k141_929665                            2935 2 +      7694 Tt
i Piliocolobus_kirkii.k141_929665                       I 23 I 2
s Piliocolobus_tephrosceles.PDMG02000036.1               26741419 2 +  26888534 tt
i Piliocolobus_tephrosceles.PDMG02000036.1              I 23 I 2
s Pongo_abelii.NDHI03003816.1                              188048 2 -    373494 tc
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19808696 2 +  19899266 tc
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               6668 1 -     15069 -t
i Presbytis_comata.k141_672698                          I 9 I 31
s Presbytis_mitrata.k141_860013                              6794 1 +     14865 -c
i Presbytis_mitrata.k141_860013                         I 9 I 20
s Pygathrix_cinerea.k141_374971                             30815 1 +     56732 -t
i Pygathrix_cinerea.k141_374971                         I 39 C 0
s Pygathrix_nigripes_b.ctg79                                 6807296 1 +   6970761 -t
i Pygathrix_nigripes_b.ctg79                               I 32 C 0
s Pygathrix_nigripes_a.k141_101123                             6689 1 +     18040 -t
i Pygathrix_nigripes_a.k141_101123                        I 34 C 0
s Rhinopithecus_bieti.k119_554384                            1086 1 -     17045 -t
i Rhinopithecus_bieti.k119_554384                       I 21 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206378574 1 - 206558726 -g
i Rhinopithecus_roxellana.NC_044549.1                   I 32 C 0
s Rhinopithecus_strykeri.ctg4                            44857476 1 -  45163003 -t
i Rhinopithecus_strykeri.ctg4                           I 20 C 0
s Symphalangus_syndactylus.tarseq_24                        15805 2 -  13920577 tt
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Theropithecus_gelada.CM009951.1                       194008699 2 - 194193292 tt
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       6283 1 -     28054 -T
i Trachypithecus_obscurus.k141_1115109                  I 25 C 0
e Eptesicus_fuscus.JH977687.1                             4707549 0 +   6522550 C
e Macroglossus_sobrinus.MacSob_scaffold_879                701732 90 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             39436 0 -     47444 C
e Petromus_typicus.PetTyp_scaffold_33007                    14226 0 -     36578 C
e Sorex_araneus.JH798170.1                               17767061 0 -  27805282 C
e Dinomys_branickii.DinBra_scaffold_1996                   157598 0 +    228994 C
e Erinaceus_europaeus.JH835290.1                         11534859 0 +  16010500 C
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           3364 0 -      6963 C
e Aplodontia_rufa.AprRuf_scaffold_156013                     4258 12 +      5067 I
e Oryctolagus_cuniculus.CM000803.1                      141876917 0 + 163896628 C
e Ochotona_princeps.JH802095.1                            4996634 0 -  23139505 C
e Lepus_americanus.LepAme_scaffold_62849                    13880 0 +     22452 C
e Perognathus_longimembris.PerPac_flattened_line_19359        641 5 +     49596 I
e Dipodomys_stephensi.DipSte_scaffold_44365                 28610 0 +     28912 C
e Dipodomys_ordii.KN672545.1                              3656967 0 +   4240102 C
e Suricata_suricatta.SurSur_flattened_line_20339            28181 0 +     62062 C
e Ziphius_cavirostris.ZipCav_flattened_line_127025           7520 0 -      8775 C
e Zalophus_californianus.ZalCal_flattened_line_4097        214889 0 -    227762 C
e Vulpes_lagopus.VulLag_flattened_line_2045                138908 0 -    281493 C
e Vicugna_pacos.KN269600.1                                1525269 0 -   2331223 C
e Ursus_maritimus.KK498671.1                              6515415 0 +  28682327 C
e Uropsilus_gracilis.UroGra_scaffold_69449                   1920 0 +     10241 C
e Tursiops_truncatus.MRVK01000923.1                      69314021 0 -  96451834 C
e Trichechus_manatus.JH594618.1                          16085939 0 +  31416278 C
e Tragulus_javanicus.TraJav_scaffold_14717                   5750 0 +     90398 C
e Tonatia_saurophila.TonSau_scaffold_3334                  136665 0 -    259118 C
e Tolypeutes_matacus.TolMat_scaffold_269431                  6100 0 +      6782 C
e Tapirus_terrestris.TapTer_scaffold_14939                  58440 0 +     99546 C
e Tapirus_indicus.TapInd_scaffold_176                      807728 0 +   1148477 C
e Tamandua_tetradactyla.TamTet_scaffold_26877               15294 0 +     45698 C
e Tadarida_brasiliensis.TadBra_scaffold_61492                 878 0 +     20549 C
e Sus_scrofa.CM000824.4                                 189272699 0 + 218635234 C
e Spilogale_gracilis.SpiGra_flattened_line_905             235418 0 -    276980 C
e Solenodon_paradoxus.SolPar_flattened_line_1012            19485 11 +    739146 I
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   32880 0 -    114521 C
e Saiga_tatarica.SaiTat_scaffold_82192                       8546 0 +     12214 C
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                19923 0 +    109198 C
e Rhinolophus_sinicus.LVEH01000179.1                      1788458 0 +   2252614 C
e Rangifer_tarandus.RanTarSib_scaffold_24239                16389 0 +     68503 C
e Puma_concolor.QAVW01000427.1                          131534966 0 - 161321710 C
e Pteropus_vampyrus.KN525959.1                             604541 0 -   3946241 C
e Pteropus_alecto.KB031157.1                             13246590 0 -  17261082 C
e Pteronura_brasiliensis.PteBra_flattened_line_1343        247294 0 -    344369 C
e Pteronotus_parnellii.KE867983.1                            4678 0 -     27784 C
e Procavia_capensis.ProCapCap_scaffold_149274                2467 1156 -      9567 I
e Platanista_gangetica.PlaMin_flattened_line_72990           5996 0 +     21690 C
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Phocoena_phocoena.PhoPho_flattened_line_11948            121909 0 -    122454 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    116408 0 -    135482 C
e Pantholops_hodgsonii.KE114631.1                         1066721 0 -   1292953 C
e Panthera_tigris.KE721879.1                              5028371 0 -   6340057 C
e Panthera_pardus.KV860323.1                              3638695 0 +  18214204 C
e Panthera_onca.PanOnc_flattened_line_1615                  34945 0 +    295523 C
e Ovis_canadensis.OviCan_scaffold_6251                      79086 0 +    140051 C
e Ovis_aries.CM001582.2                                 134077871 0 - 275406953 C
e Otocyon_megalotis.JAEUCK010005121.1                      308812 0 -    505867 C
e Orycteropus_afer.OryAfe_flattened_line_13509              60549 0 -     66828 C
e Orcinus_orca.KB316965.1                                 7225305 0 -   7562323 C
e Okapia_johnstoni.LVCL01S0017931.1                         37593 0 +     78940 C
e Odocoileus_virginianus.KZ101650.1                       1080275 0 +   1425656 C
e Odobenus_rosmarus.KB229369.1                             680162 0 -   3126709 C
e Nyctereutes_procyonoides.CAJHUB010000786.1                31528 0 +   3668941 C
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Neophocaena_asiaeorientalis.KZ688543.1                  3951620 0 -   4490290 C
e Neomonachus_schauinslandi.NINY01007774.1                4485495 0 -  14209539 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             5628 0 -      8794 C
e Myotis_myotis.MyoMyo_scaffold_6123                        12401 0 +     66751 C
e Myotis_lucifugus.GL429887.1                             3467158 0 -   3747815 C
e Myotis_davidii.KB114863.1                               5021080 0 +   6462685 C
e Myotis_brandtii.KE161952.1                               969656 0 +   8389877 C
e Mustela_putorius.JH417978.1                             4424983 0 -  28371801 C
e Murina_feae.MurFea_scaffold_2254                          22038 0 -    100666 C
e Mungos_mungo.MunMun_flattened_line_8729                  145521 0 -    168139 C
e Moschus_moschiferus.MosMos_scaffold_78805                  2095 0 -     19904 C
e Mormoops_blainvillei.MorMeg_scaffold_2952                162039 0 +    265003 C
e Monodon_monoceros.MonMon_M_scaffold_5598                 147008 0 +    154973 C
e Mirounga_angustirostris.MirAng_flattened_line_8852        12105 0 -    104932 C
e Miniopterus_schreibersii.MinSch_scaffold_24116            35177 0 +     45743 C
e Miniopterus_natalensis.LDJU01000022.1                   8210688 0 +  10048721 C
e Micronycteris_hirsuta.MicHir_scaffold_37978               23515 0 -     32043 C
e Microgale_talazaci.MicTal_scaffold_34660                  35528 0 -     48017 C
e Mesoplodon_bidens.MesBid_scaffold_227248                    907 0 -      1377 C
e Mellivora_capensis.MelCap_flattened_line_15433             1615 0 -     87323 C
e Megaderma_lyra.MegLyr_scaffold_3562                       64783 239 -    234502 I
e Manis_pentadactyla.KN017078.1                             36816 0 +     58827 C
e Manis_javanica.JSZB01003966.1                            146673 0 +    252755 C
e Lycaon_pictus.CM007556.1                               11088727 0 +  39895028 C
e Loxodonta_africana.GL010040.1                          20595417 0 -  62548349 C
e Lipotes_vexillifer.KE558548.1                            136580 0 +   3060487 C
e Leptonychotes_weddellii.KB714749.1                      3086589 0 -   3498232 C
e Lasiurus_borealis.LasBor_scaffold_59542                    4384 0 +     26176 C
e Kogia_breviceps.KogBre_flattened_line_35920               24230 0 +     37189 C
e Inia_geoffrensis.IniGeo_flattened_line_66725               9623 0 +     17520 C
e Hyaena_hyaena.HyaHya_flattened_line_20729                 17893 9 -     67322 I
e Hipposideros_galeritus.HipGal_scaffold_104691              8154 325 -      9143 I
e Hipposideros_armiger.JXIK01001085.1                      279004 0 -    477199 C
e Hippopotamus_amphibius.HipAmp_scaffold_1308              147723 0 +    277961 C
e Heterohyrax_brucei.HetBruBak_scaffold_25354               61360 1157 +     73687 I
e Hemitragus_hylocrius.HemHyl_scaffold_16669                28080 0 -     91191 C
e Helogale_parvula.HelPar_flattened_line_22962              17826 0 +     53719 C
e Giraffa_tippelskirchi.LVKQ01S012154.1                    181865 0 -    189561 C
e Felis_nigripes.FelNig_flattened_line_8080                 21802 0 +     52776 C
e Felis_catus_fca126.CM031420.1                         129280662 0 - 158578461 C
e Eubalaena_japonica.EubJap_flattened_line_7756             62087 0 +     89355 C
e Eschrichtius_robustus.EscRob_flattened_line_685          315634 0 +    330699 C
e Equus_przewalskii.ATBW01073585.1                          13576 0 +     92910 C
e Equus_caballus.CM000402.2                              13352087 0 +  41866177 C
e Equus_asinus.JREZ01000062.1                             5853582 0 -   7175178 C
e Enhydra_lutris.KZ291749.1                              85872803 0 +  99434291 C
e Elephantulus_edwardii.JH947210.1                        7816992 12417 +  15467074 I
e Elaphurus_davidianus.JRFZ01086400.1                     1492060 0 +   1727528 C
e Eidolon_helvum.KE772537.1                                 12858 0 +     24177 C
e Echinops_telfairi.JH980316.1                           22999536 0 -  44670279 C
e Diceros_bicornis.DicBicMic_scaffold_9545                   3794 0 +    151128 C
e Dicerorhinus_sumatrensis.PEKH010003161.1                 323142 0 +    993696 C
e Desmodus_rotundus.KZ672188.1                           18699611 0 -  18957592 C
e Delphinapterus_leucas.KZ290064.1                       80037418 0 -  96802777 C
e Dasypus_novemcinctus.JH568778.1                          184239 0 -   6883506 C
e Cryptoprocta_ferox.CryFer_flattened_line_19014            52628 0 -     70449 C
e Crocidura_indochinensis.CroInd_scaffold_848148              199 0 +      1327 C
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1008 325 -      5782 I
e Condylura_cristata.JH655880.1                          60614198 0 +  78930452 C
e Choloepus_hoffmanni.KN194586.1                           762369 0 +    964067 C
e Choloepus_didactylus.ChoDid_scaffold_36182                17064 0 -     21363 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_160623         4247 0 -      9338 C
e Catagonus_wagneri.CatWag_scaffold_1305                   159479 0 -    276539 C
e Carollia_perspicillata.CarPer_scaffold_4436               60326 0 +     67245 C
e Capra_hircus.CM004562.1                               135707023 0 - 157403528 C
e Capra_aegagrus.CM003214.1                              21325795 0 + 157394656 C
e Canis_lupus_orion.HG994411.1                           16456286 0 -  44759192 C
e Canis_lupus_familiaris.chr31                           11089271 0 +  39895921 C
e Canis_lupus_dingo.QKWQ01001993.1                       11266737 0 -  35597290 C
e Canis_lupus_VD.CanFam_VD_scaffold_16982                   15096 0 +     87036 C
e CanFam4.chr31                                          11520070 0 +  39901454 C
e Camelus_ferus.KB016973.1                                2973602 0 +   6889770 C
e Camelus_dromedarius.KN271192.1                           397866 0 -  15254737 C
e Camelus_bactrianus.KN276303.1                           3220165 0 -   8989139 C
e Bubalus_bubalis.KI419065.1                              1233374 0 -   1914593 C
e Bos_taurus.CM000177.6                                 136296294 0 - 158972876 C
e Bos_mutus.JH883513.1                                     573102 0 -    998990 C
e Bos_indicus.CM003021.1                                138140561 0 - 161108492 C
e Bison_bison.KN264915.1                                  6560446 0 +   6870073 C
e Beatragus_hunteri.BeaHun_scaffold_21644                   43830 0 -     72089 C
e Balaenoptera_bonaerensis.DF502048.1                        5966 0 -     13118 C
e Balaenoptera_acutorostrata.KI537095.1                  26380794 0 +  51448160 C
e Artibeus_jamaicensis.ArtJam_scaffold_41619                 9539 0 -     29036 C
e Antilocapra_americana.AntAmePen_scaffold_42841            31302 0 +     33004 C
e Anoura_caudifer.AnoCau_scaffold_422                      391119 0 -    631301 C
e Ammotragus_lervia.NIVO01013474.1                        3520720 0 +   4113121 C
e Ailurus_fulgens.LNAC01000003.1                          7095279 0 -  16596857 C
e Ailuropoda_melanoleuca.LNAT01000321.1                  10657927 0 +  23371972 C
e Acinonyx_jubatus.LLWD01000356.1                         2034611 0 +   3721120 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19596 0 -    119109 C
e Glis_glis.GliGli_scaffold_79770                           14364 0 -     18683 C
e Zapus_hudsonius.ZapHud_scaffold_64392                     16436 0 -     20485 C
e Jaculus_jaculus.JH725517.1                              8566539 0 +  11848649 C
e Allactaga_bullata.AllBul_scaffold_70162                   17525 0 -     22067 C
e Galeopterus_variegatus.GalVar_scaffold_354               156907 0 +    324696 C
e Microtus_ochrogaster.CM001673.1                        22820341 4 -  98408828 I
e Xerus_inauris.XerIna_scaffold_7898                       127482 5 -    134049 I
e Varecia_variegata.k141_775891                             25501 3 -     33872 I
e Varecia_rubra.k141_432109                                  5966 3 -     20643 I
e Tupaia_tana.TupTan_flattened_line_68454                    5906 0 +     13056 C
e Tupaia_chinensis.KB320831.1                             2793720 0 -   3938065 C
e Trachypithecus_pileatus.k141_1022309                       3366 18 +     13828 I
e Trachypithecus_phayrei.ctg3                            44661058 10 -  44834318 I
e Trachypithecus_melamera.k141_699241                        1012 22 -     24393 I
e Trachypithecus_leucocephalus.k141_381681                   1136 24 +     12481 I
e Trachypithecus_laotum.k141_760702                          2855 18 +     14371 I
e Trachypithecus_hatinhensis.k141_504423                     4199 22 -     15592 I
e Trachypithecus_germaini.k141_868450                        2022 18 -     11566 I
e Trachypithecus_geei.k141_670367                           44219 22 -     54611 I
e Trachypithecus_francoisi.k141_768164                       2820 24 -     14244 I
e Trachypithecus_cristatus.k141_1011511                      2884 44 -     12939 I
e Trachypithecus_crepusculus.k141_1588528                   21498 16 -     32910 I
e Trachypithecus_auratus.k141_738098                        27766 28 +     38948 I
e Tarsius_wallacei.k141_48636                               60408 0 +     65473 C
e Tarsius_lariang.k141_609102                               27092 0 +     42269 C
e Spermophilus_dauricus.KZ294190.1                        2240365 5 +   2842873 I
e Sigmodon_hispidus.SigHis_scaffold_11332                  100871 0 -    120886 C
e Semnopithecus_vetulus.k141_1143185                        14609 24 +     30600 I
e Semnopithecus_schistaceus.k141_387461                     31570 41 +     42640 I
e Semnopithecus_priam.k141_410937                           38450 16 +     46263 I
e Semnopithecus_johnii.k141_785014                         119664 24 +    130994 I
e Semnopithecus_hypoleucos.k141_761524                       9661 22 +     20762 I
e Semnopithecus_entellus.k141_1572367                        4268 39 +     15331 I
e Sapajus_macrocephalus.k141_966464                         21380 0 -     62485 C
e Sapajus_apella.ctg10                                   17342019 0 -  30362882 C
e Saimiri_ustus.k141_1282476                                 5292 0 -     76454 C
e Saimiri_sciureus.k141_1947592                              5355 0 +     60816 C
e Saimiri_oerstedii.k141_841116                              5377 0 +     67014 C
e Saimiri_macrodon.k141_2087127                              5284 0 -     60842 C
e Saimiri_cassiquiarensis.k141_808270                        5342 0 +     34089 C
e Saimiri_boliviensis.NW_024100938.1                     15673429 0 -  43202129 C
e Rattus_norvegicus.chr11                                13915860 1475 +  90463843 I
e Psammomys_obesus.NESX01026517.1                           36081 2 +     77221 I
e Propithecus_verreauxi.k141_158021                         39953 3 -     48185 I
e Propithecus_tattersalli.k141_907138                       17689 3 -     53241 I
e Propithecus_perrieri.k141_7554                            18055 3 +     27322 I
e Propithecus_edwardsi.k141_1317105                         36132 3 -     44753 I
e Propithecus_diadema.k141_577245                           43745 3 +     52369 I
e Propithecus_coronatus.k141_1353159                         4402 3 +     11805 I
e Propithecus_coquerelli.NW_012147863.1                     19492 3 -     30946 I
e Prolemur_simus.MPIZ01000048.1                           6849325 3 +  12164890 I
e Plecturocebus_moloch.k141_890597                          24007 0 -     75465 C
e Plecturocebus_miltoni.k141_841561                         13420 0 +    134592 C
e Plecturocebus_hoffmannsi.k141_985533                       1414 0 -    119457 C
e Plecturocebus_grovesi.k141_242819                         23697 0 +    152463 C
e Plecturocebus_dubius.k141_3565563                          4343 0 -     55515 C
e Plecturocebus_cupreus.k141_1145860                          260 0 -     43940 C
e Plecturocebus_cinerascens.k141_744510                     23624 0 +    147771 C
e Plecturocebus_caligatus.k141_2539816                      14024 0 -     98129 C
e Plecturocebus_brunneus.k141_498086                        23784 0 +     67491 C
e Plecturocebus_bernhardi.k141_959214                       23572 0 +     44506 C
e Pithecia_vanzolinii.k141_831006                           14232 0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13475329 0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          6329 0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        13101 0 -     16101 C
e Pithecia_hirsuta.k141_1152968                              9902 0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        25855 0 +     78826 C
e Pithecia_albicans.k141_991845                             44470 0 -     61926 C
e Peromyscus_maniculatus.KI615518.1                       4950937 0 -   8017169 C
e Perodicticus_potto.k141_713187                            25474 3 -     27972 I
e Perodicticus_ibeanus.k141_117958                           6160 3 -     23713 I
e Otolemur_garnettii.GL873528.1                          18009456 3 -  38779656 I
e Otolemur_crassicaudatus.k141_505435                        1475 3 -     53940 I
e Onychomys_torridus.OnyTor_scaffold_12578                  37690 6 +     62360 I
e Ondatra_zibethicus.OndZib_scaffold_6821                  125594 4 +    145789 I
e Octodon_degus.JH651621.1                                3686495 0 +  10294119 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65670190 0 +  89412551 C
e Nycticebus_coucang.k141_2051882                            4581 0 +      6470 C
e Nycticebus_bengalensis.LG16                            65567855 0 -  95554990 C
e Nannospalax_galili.KL201303.1                            119159 6 +    362372 I
e Myocastor_coypus.MyoCoy_scaffold_3653                     91001 0 -    117718 C
e Muscardinus_avellanarius.MusAve_scaffold_9643             12869 0 +     98495 C
e Mus_spretus.CM004110.1                                 74333150 0 +  97876770 C
e Mus_pahari.LT608305.1                                  67556618 0 +  89017189 C
e Mus_musculus.chr16                                     75490415 0 +  98207768 C
e Mus_caroli.LT608236.1                                  70767338 0 +  92629107 C
e Mirza_zaza.k141_226143                                     6369 3 +      8497 I
e Microcebus_murinus.CM007691.1                          16510980 3 +  47401472 I
e Mesocricetus_auratus.KB708139.1                         1047499 8 -  26018355 I
e Meriones_unguiculatus.MerUng_scaffold_52233               13799 2 +     15977 I
e Marmota_marmota.CZRN01000005.1                         36874268 5 +  64221397 I
e Macaca_fascicularis.k141_155037                           47860 12 +     63263 I
e Macaca_arctoides.k141_2201161                             20946 20 +     74745 I
e Loris_tardigradus.ctg97                                 3779150 0 +   6799190 C
e Loris_lydekkerianus.k141_550999                           11401 0 +     84689 C
e Lepilemur_septentrionalis.k141_578524                     32347 3 -     33031 I
e Lepilemur_ruficaudatus.k141_617879                        79356 3 +    116806 I
e Lepilemur_dorsalis.k141_134267                            54094 3 +     63517 I
e Lepilemur_ankaranensis.k141_884009                        24708 3 +     39228 I
e Lemur_catta.scaffold_1                                258407958 3 - 285822530 I
e Lagothrix_lagothricha.k141_12968                          50864 0 -    147782 C
e Indri_indri.k141_5141390                                   1122 3 -      3181 I
e Ictidomys_tridecemlineatus.JH393315.1                   7126449 5 +  13083262 I
e Hystrix_cristata.HysCri_scaffold_50788                     6758 0 +     22540 C
e Heterocephalus_glaber.JH602058.1                        2551694 0 +  31725842 C
e Hapalemur_occidentalis.k141_797938                        46279 3 -     54384 I
e Hapalemur_meridionalis.k141_186231                        29651 3 -     42470 I
e Hapalemur_griseus.k141_1387522                             6402 3 +     56096 I
e Hapalemur_gilberti.k141_279011                             1076 3 -     11661 I
e Hapalemur_alaotrensis.k141_1280836                         2596 3 +     10286 I
e Graphiurus_murinus.GraMur_scaffold_4493                   77863 0 +    118900 C
e Galagoides_demidoff.k141_1769638                          11100 3 +     27357 I
e Galago_senegalensis.k141_964197                           14034 3 -     43889 I
e Galago_moholi.ctg555                                     211660 3 -    847004 I
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I
e Eulemur_sanfordi.k141_186399                              16595 3 -     29447 I
e Eulemur_rufus.k141_1620292                                33869 3 +     46535 I
e Eulemur_rubriventer.k141_411740                           19131 3 +     26808 I
e Eulemur_mongoz.k141_825972                                16675 3 +     27497 I
e Eulemur_fulvus.k141_653297                                12015 3 +    109717 I
e Eulemur_flavifrons.k141_903901                             8537 3 +     60246 I
e Eulemur_coronatus.k141_3240342                            12216 3 +     36558 I
e Eulemur_collaris.k141_311830                               5742 3 -      6809 I
e Eulemur_albifrons.k141_715837                              5810 3 +     13586 I
e Ellobius_talpinus.LOJH01090055.1                           7151 4 -      7838 I
e Ellobius_lutescens.LOEQ01003611.1                        240029 1 -    369425 I
e Dolichotis_patagonum.DolPat_scaffold_14102                36687 0 -     73477 C
e Daubentonia_madagascariensis.ctg11                     16845635 3 +  31942871 I
e Dasyprocta_punctata.DasPun_flattened_line_634             59461 0 -    236241 C
e Cuniculus_paca.CunPac_flattened_line_16637                18370 0 +     26546 C
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 31676 0 -     67205 C
e Ctenodactylus_gundi.CteGun_scaffold_447                  209031 0 -    956709 C
e Cricetulus_griseus.LT883672.1                          53029812 13 +  72327488 I
e Cricetomys_gambianus.CriGam_scaffold_949                 279153 0 -    399297 C
e Colobus_angolensis.KN985967.1                          10887317 0 +  10971483 C
e Chiropotes_sagulatus.k141_773804                          16013 0 +     40510 C
e Chiropotes_israelita.k141_1189915                         71833 0 +    196370 C
e Chinchilla_lanigera.JH721867.1                         15962331 0 +  43084221 C
e Cheracebus_torquatus.k141_315545                          47026 0 +     54541 C
e Cheracebus_regulus.k141_2128895                           42347 0 +     57117 C
e Cheracebus_lugens.k141_203936                             23307 0 +     25473 C
e Cheracebus_lucifer.k141_619653                             6289 0 -     18223 C
e Cheirogaleus_medius.k141_133808                            8812 3 +     13308 I
e Cheirogaleus_major.k141_1157592                           59764 3 -     68416 I
e Cercopithecus_petaurista.k141_64532                        2834 0 -     25661 C
e Cephalopachus_bancanus.k141_702587                         8664 0 +     21754 C
e Cebus_unicolor.k141_239009                                13261 0 +     25043 C
e Cebus_olivaceus.k141_93739                                 9018 0 -     26817 C
e Cebus_albifrons.Contig22                               18891474 0 -  29618158 C
e Cavia_tschudii.CavTsc_scaffold_488                       177368 0 +    436027 C
e Cavia_porcellus.DS562889.1                             15799177 0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15787241 0 -  24422027 C
e Castor_canadensis.CasCan_scaffold_47037                   31717 7 +     33760 I
e Carlito_syrichta.NW_007248099.1                          309640 0 +    345090 C
e Cacajao_melanocephalus.k141_1160263                        8247 0 -    134917 C
e Cacajao_hosomi.k141_303789                                15704 0 -    216513 C
e Cacajao_calvus.k141_96166                                 13661 0 +    125063 C
e Cacajao_ayresi.k141_724503                               114632 0 -    171031 C
e Avahi_peyrierasi.k141_798820                               1105 3 +      6337 I
e Avahi_laniger.k141_2840928                                 7489 3 -     16375 I
e Ateles_paniscus.k141_1631200                               6745 0 -     25888 C
e Ateles_marginatus.k141_899112                             64774 0 +    119057 C
e Ateles_geoffroyi_a.k141_1300742                             16782 0 -     58268 C
e Ateles_chamek.k141_1072810                                12279 0 +     89302 C
e Ateles_belzebuth.k141_1348307                             61266 0 +     85812 C
e Ateles_geoffroyi_b.tarseq_2582                             9539995 0 +  39197703 C
e Arctocebus_calabarensis.k141_587554                        1753 3 +      9265 I
e Aotus_vociferans.k141_718647                               6726 0 +     23246 C
e Aotus_trivirgatus.k141_1740727                             6724 0 -    104377 C
e Aotus_nancymaae.KZ196176.1                              5750135 0 +   9889416 C
e Aotus_griseimembra.k141_3275623                            6178 0 +     22701 C
e Aotus_azarae.k141_3170768                                 63236 0 +     78111 C
e Alouatta_seniculus.k141_1531728                             741 0 -      1692 C
e Alouatta_puruensis.k141_1284840                            4606 0 -      4927 C
e Alouatta_palliata.k141_2764429                              526 0 -      1480 C
e Alouatta_nigerrima.k141_3537692                             613 0 +      1660 C
e Alouatta_macconnelli.k141_2177643                           564 0 -      1868 C
e Alouatta_juara.k141_1244470                                1180 0 +      2129 C
e Alouatta_discolor.k141_811576                             11557 0 -     21359 C
e Alouatta_caraya.k141_1710068                                601 0 +      1555 C
e Alouatta_belzebul.k141_1818029                            10884 0 -     18050 C
e Acomys_cahirinus.AcoCah_scaffold_1625                    113354 2 -    189883 I
e Nomascus_siki_b.tarseq_80                             25641 26 -  18771707 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               14454 122 +    209709 t-t-------t------ta-gtagagatggggtttcaccatattggccaggatggtccggatctgttgacctt--gtgatttgcctgcctcagcctcccaaagtgctgggatcacagacgtgagcca-----ctgcgcccagcc
s Allenopithecus_nigroviridis.k141_2469532                   2188 119 -     60446 -----------------ta-gtagagatggggtttcgccatgttgaccaggatggtcccgatctgctgacctt--gtgatttgcctgccttggcctcccaaagtgctgggattacaggcatgagcca-----ccacgtccagcc
i Allenopithecus_nigroviridis.k141_2469532              I 1 C 0
s Allochrocebus_lhoesti.k141_3566948                         2902 122 -     29318 t-a-------g------ta-gtagagatggggtttcgccatgttgaccaggatggtcccgatctgctgacctt--gtgatttgcctgccttggcctcccaaagtgctgggattacaggcatgagcca-----ccacgcccagcc
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         1838 122 +     38766 t-t-------t------ta-gtagagatggggtttcgccatgttgaccaggatggtcccgatctgctgacctt--gtgatttgcctgccttggcctcccaaagtgctgggattacaggcatgagcca-----ccacgcccagcc
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          2796 122 -     80423 t-a-------g------ta-gtagagatggggtttcgccatgttgaccaggatggtcccgatctgctgacctt--gtgatttgcctgccttggcctcccaaagtgctgggattacaggcatgagcca-----gcacgcccagcc
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Cercocebus_atys.KQ010443.1                              6556128 126 +   6739814 ttt-------tttt---ta-gtagagatggggtttcgccatgttgaccaggatggtcccgatctgctgacctt--gtgatttgcctgccttggcctcccaaagtgctggaattacaggcatgagcca-----ccatgcccagcc
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      27605 123 +     60454 ----------tttt---ta-gtagagatggggtttcgccatgttgaccaggatggtcccgatctgctgacctt--gtgatttgcctgccttggcctcccaaagtgctggaattacaggcatgagcca-----ccatgcccagcc
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          2812 123 -     21101 ----------tttt---ta-gtagagatggggtttcgccatgttgaccaggatggtcccgatctgctgacctt--gtgatttgcctgccttggcctcccaaagtgctggaattacaggcatgagcca-----ccatgcccagcc
i Cercocebus_lunulatus.k141_4634644                     I 1 C 0
s Cercocebus_torquatus.k141_3969582                         60120 125 -    107033 t-t-------tttt---ta-gtagagatggggtttcgccatgttgaccgggatggtcccgatctgctgacctt--gtgatttgcctgccttggcctcccaaagtgctggaattacaggcatgagcca-----ccatgcccagcc
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        3005 119 -     17608 -----------------aa-gtagagatggggtttcgccatgttgaccaggatggtcccgatctgctgacctt--gtgatttgcctgccttggcctcccaaagtgctgggattacaggcatgagccc-----ccacgcccagcc
i Cercopithecus_ascanius.k141_4123525                   I 1 C 0
s Cercopithecus_cephus.k141_3893260                           164 119 +     45019 -----------------Ta-gtagagatggggtttcgccatgttgaccaggatggtcccgatctgctgacctt--gtgatttgcctgccttggcctcccaaagtgctgggattacaggcatgagcca-----ccacgcccagcc
i Cercopithecus_cephus.k141_3893260                     I 1 C 0
s Cercopithecus_diana.k141_2561715                            248 119 +     15177 -----------------ta-gtagagatggggtttcgccatgttgactaggatggtcccgatctgctgacctt--gtgatttgcctgccttgtcctccaaatgtgctgggattacaggcatgatcca-----ccgcgcccagcc
i Cercopithecus_diana.k141_2561715                      I 1 C 0
s Cercopithecus_hamlyni.k141_129805                          3048 119 +     16677 -----------------ta-ttagagatggggtttcgccatgttgaccaggatggtcccgatctgctgacttt--gtgatttgcctgccttggcctcccaaagtgctgggattacaggcatgagcca-----ccacgcccagcc
i Cercopithecus_hamlyni.k141_129805                     I 1 C 0
s Cercopithecus_lowei.k141_623764                           25217 119 +     35983 -----------------ta-gtagagatggggtttcgccatgttgaccaggatggtcccgatctgctgacctt--gtgatttgcctgccttggtctcccaaagtgctgggattacaggcatgagcca-----ccacgcccagcc
i Cercopithecus_lowei.k141_623764                       I 1 C 0
s Cercopithecus_albogularis.ctg51                              11991746 119 +  12117833 -----------------aa-gtagagatggggtttcgccatgttgaccaggatggtcccgatctgctgacctt--gtgatttgcctgccttggcctcccaatgtgctgggattacaggcatgagcca-----ccacgcccagcc
i Cercopithecus_albogularis.ctg51                             I 1 C 0
s Cercopithecus_mona.ctg12                               46478503 119 +  46592721 -----------------ta-gtagagatggggtttcgccatgttgaccaggatggtcccgatctgctgacctt--gtgatttgcctgccttggtctcccaaagtgctgggattacaggcatgagcca-----ccacgcccagcc
i Cercopithecus_mona.ctg12                              I 1 C 0
s Cercopithecus_neglectus.k141_2078027                      42058 119 -     45581 -----------------ta-gtagagatggggtttcgccatgttgaccaggatggtcccgatgtgctgacctt--gtgatttgcctgccttggcctcccaaagtgctgggattacaggcatgagccc-----ccacgcccagcc
i Cercopithecus_neglectus.k141_2078027                  I 1 C 0
s Cercopithecus_nictitans.k141_1129315                       3060 119 +     35577 -----------------aa-gtagagatggggtttcgccatgttgaccaggatagtcccgatctgctgacctt--gtgatttgcctgccttggcctcccaatgtgctgggattacaggcatgagcca-----ccacgcccagcc
i Cercopithecus_nictitans.k141_1129315                  I 1 C 0
s Cercopithecus_petaurista.k141_64532                        2834 118 -     25661 ------------------a-gtagagatggggtttcgccatgttgaccaggatggtcccgatctgctgacctt--gtgatttgcctgccttggcctcccaaagtgctgggattacaggcatgagcca-----ccacgcccagcc
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        2813 119 -     17744 -----------------ta-gtagagatggggtttcgccatgttgaccaggatggtcccgatctgctgacctt--gtgatttgcctgccttggcctcccaaagtgctgggattacaggcatgagcca-----ccacgcccagcc
i Cercopithecus_pogonias.k141_3109732                   I 1 C 0
s Cercopithecus_roloway.k141_2263608                        22418 119 +     37128 -----------------ta-gtagagatggggtttcgccatgttgaccaggatggtcccgatctgctgacctt--gtgatttgcctgccttggcctcccaaagtgctgggattacaggcatgagcca-----ccgcgcccagcc
i Cercopithecus_roloway.k141_2263608                    I 1 C 0
s Chlorocebus_aethiops.ctg22                             15140412 122 -  15256731 t-t-------t------ta-gtagagatggggtttcgccatgttgaccaggatggtcccgatctgctgacctt--gtgatttgcctgccttggcctcccaaagtgctgggattacaggcatgagcca-----ccacgcccagcT
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      35021 122 -     53260 t-t-------t------ta-gtagagatggggtttcgccatgttgaccaggatggtcccgatctgctgacctt--gtgatttgcctgccttggcctcccaaagtgctgggattacaggcatgagcca-----ccacacccagcc
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101145580 122 + 101219884 t-t-------t------ta-gtagagatggggtttcgccatgttgaccaggatggtcccgatctgcTGACctg--gtgatttgcctgccttggcctcccaaagtgctgggattacaggcatgagcca-----ccacgcccagcc
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10887317 120 +  10971483 t-t-------t------ta-gtagagatggtgtttcaccatgttggccaggctggtc---aactcctgacctcaggtgatctgcccacctcaacctcccaaagtgctgggattacaggcttgagcca-----ccgcgcccggc-
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147665503 120 + 156195979 t-t-------t------ta-gtagagatggggtt-cactatgttggccaggatggtcccgatctgctgacctt--gtgatttgcctgccttggcctcccaaagtgctgggactacaggcatgagcca-----ccgcgcccag-c
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            17485 121 +     23629 t-t-------t------ta-gtagagatggggtttcactatgttggccaggatggtcccgatctgctgacctt--gtgatttgcctgccttggcctcccaaagtgctgggactacaggcatgagcca-----ccacgcccag-c
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Erythrocebus_patas.Contig8                             48777591 122 -  48907691 t-t-------t------ta-gtagagatggggtttcgccatgttgaccaggatagtcccaatctgctgacctt--gtgatttgcctgccttggcctcccaaagtgctgggattacaggcatgagcca-----ccacgcccagcc
i Erythrocebus_patas.Contig8                            I 1144 C 0
s Gorilla_beringei.k141_111300                               6164 122 -     14630 t-t-------t------ta-gtggagatggggtttcaccatgttggccaggatggtcctgatctgttgacctt--gtgatttccctgcctcggcctcccaaagtgctgggatcacaggcgtgagcta-----ctgcgcccagcT
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119653264 122 - 195582420 t-t-------t------ta-gtggagatggggtttcaccatgttggccaggatggtcctgatctgttgacctt--gtgatttccctgcctcggcctcccaaagtgctgggatcacaggcgtgagcta-----ctgcgcccagct
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Hoolock_leuconedys.ctg79                                      5857 122 -   7690867 c-t-------t------ta-gtagagatggggtttcaccatgttggccaggatggtcccgatctgttgacctt--gtgatttgcctgcctcggcctcccaaagtgctgggattacaggcgtgagcca-----ctgcgcccagcc
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hylobates_abbotti.k141_164775                               640 122 -      2073 c-t-------t------ta-gtagcgatgcggtttcaccatgttggccaggatggtcccgatctgttgacctt--gtgatttgcctgcctcggcctcccaaagtgctgggattacaggcgtgagcca-----ctgtgcccagcc
i Hylobates_abbotti.k141_164775                         C 0 C 0
s Hylobates_agilis.k141_1621614                               667 122 -      1673 c-t-------t------ta-gtagagatggggtttcaccatgttggccaggatggtcccgatctgttgacctt--gtgatttgcctgccttggcctcccaaagtgctgggattacaggcgtgagcca-----ctgcgcccagcc
i Hylobates_agilis.k141_1621614                         I 264 I 78
s Hylobates_klossii.k141_468230                               193 122 +      5464 c-t-------t------ta-gtagagatggggtttcaccatgttggccaggatggtcccgatctgttgacctt--gtgatttgcctgcctcggcctcccaaagtgctgggattacaggcgtgagcca-----ctgcgcccagcc
i Hylobates_klossii.k141_468230                         n 122 I 78
s Hylobates_pileatus_b.ContigUN                                 14625546 122 -  25970782 c-t-------t------ta-gtagagatggggtttcaccatgttggccaggatggtcccgatctgttgacctt--gtgatttgcctgcctcggcctcccaaagtgctgggattacaggcgtgagcca-----ctgcgcccagcc
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_950183                              243 122 +      2027 c-t-------t------ta-gtagagatggggtttcaccatgttggccaggatggtcccgatctgttgacctt--gtgatttgcctgcctcggcctcccaaagtgctgggattacaggcgtgagcca-----ctgtgcccagcc
i Hylobates_muelleri.k141_950183                        n 122 I 39
s Hylobates_pileatus_a.tarseq_592                             34706 122 -     60944 c-t-------t------ta-gtagagatggggtttcaccatgttggccaggatggtcccgatctgttgacctt--gtgatttgcctgcctcggcctcccaaagtgctgggattacaggcgtgagcca-----ctgcgcccagcc
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19249203 128 +  19376315 t-t-------tttttttta-gtagagatggggtttcgccatgttgaccaggatggtcccgatctgctgacctt--gtgatttgcctgccttggcctcccaaagtgctgggattacaggcgtgagcca-----ccatgcccagcc
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Macaca_arctoides.k141_2201161                             20966 123 +     74745 ----------tttt---ta-gtagagatgaggtttcaccatgttgaccaggatggtgccgatctgctgacctt--gtgatttgcttgccttggcctcccaaagtgctgggattacaggcatgagcca-----ccacgcccagcc
i Macaca_arctoides.k141_2201161                         I 20 C 0
s Macaca_assamensis.Contig65                             12707424 125 +  12821369 t-t-------tttt---ta-gtagagatgaggtttcaccatgttgaccaggatggtgccgatctgctgacctt--gtgatttgcttgccttggcctcccaaagtgctgggattacaggcatgagcca-----ccacgcccagcc
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                   1 125 -     26467 T-T-------tttt---ta-gtagagatgaggtttcaccatgttgaccaggatggtgctgatctgctgacctt--gtgatttgcttgccttggcctcccaaagtgctgggattacaggcatgagcca-----ccacgcccagcc
i Macaca_cyclopis.k119_883699                           N 0 C 0
s Macaca_fascicularis.k141_155037                           47872 123 +     63263 ----------tttt---ta-gtagagatgaggtttcaccatgttgaccaggatggtgctaatctgctgacctt--gtgatttgcttgccttggcctcccaaagtgctgggattacaggcatgagcca-----ccacgcccagcc
i Macaca_fascicularis.k141_155037                       I 12 C 0
s Macaca_fuscata.k119_938422                                    0 105 -     26361 --------------------------------tttcaccatgttgaccaggatggtgccgatctgctgacctt--gtgatttgcttgccttggcctcccaaagtgctgggattacaggcatgagcca-----ccacgcccagcc
i Macaca_fuscata.k119_938422                            N 0 C 0
s Macaca_leonina.k141_467472                                 3160 120 -      7381 ----------tt-----ta-gtagagatgaggtttcaccatgttgaccaggatggtgctgatctgctgacctt--gtgatttgcttgccttggcctcccaaagtgctgggattacaggcatgagccacc-cgcccag-----cc
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  46393 120 -     79256 t-t-------tttt---ta-gtagagatgaggtttcaccatgttgaccaggatggtgctgatctgctgacctt--gtgatttgcttgccttggcctcccaaagtgctgggattacaggcatgagcca-----ccgcg-----cc
i Macaca_maura.k141_251854                              C 0 I 5
s Macaca_mulatta.NC_041755.1                            196036500 120 + 196197964 t-t-------tttt---ta-gtagagatgaggtttcaccatgttgaccaggatggtgctgatctgctgacctt--gtgatttgcttgccttggcctcccaaagtgctgggattacaggcatgagcca-----ccacg-----cc
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11446670 116 +  11645122 t-t-------tttt---ta-gtagagatgaggtttcaccatgttgaccaggatggtgctgatctgctgacctt--gtgatttgcttgccttggcctcccaaagtgctgggattacaggcatgagcca---------g-----cc
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   5340 127 -     46448 t-tttttttttttt---ta-gtagagatgaggtttcaccatgttgaccaggatggtgctgatctgctgacctt--gtgatttgcttgccttggcctcccaaagtgctgggattacaggcatgagcca-----ccacg-----cc
i Macaca_nigra.k141_282495                              C 0 I 5
s Macaca_radiata.k141_3680256                                3014 125 -     13212 t-t-------tttt---ta-gtagagatgaggtttcaccatgttgaccaggatggtgccgatctgctgacctt--gtgatttgcttgccttggcctcccaaagtgctgggattacaggcatgagcca-----ccacgcccagcc
i Macaca_radiata.k141_3680256                           I 2 C 0
s Macaca_siberu.k141_741907                                 16692 123 -     55006 ----------tttt---ta-gtagagatgaggtttcaccatgttgaccaggatggtgctgatctgctgacctt--gtgatttgcttgccttggcctcccaaagtgctgggattacaggcatgagccaccacgcccag-----cc
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43841798 123 +  43892939 ----------tttt---ta-gtagagatgaggtttcaccatgttgaccaggatggtgctgatctgctgacctt--gtgatttgcttgccttggcctcccaaagtgctgggattacaggcatgagccaccacgcccag-----cc
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               17977 125 -     24607 t-t-------tttt---aa-gtagagatgaggtttcaccatgttgaccaggatggtgctgatctgctgacctt--gtgatttgcttgccttggcctcccaaagtgctgggattacaggcatgagcca-----ccacacccagcc
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               5346 118 -     27140 ----------tttt---ta-gtagagatgaggtttcaccatgttgaccaggatggtgctgatctgctgacctt--gtgatttgcttgccttggcctcccaaagtgctgggattacaggcatgagcca-----ccacg-----cc
i Macaca_tonkeana.k141_2870633                          I 1 I 5
s Mandrillus_leucophaeus.scaffold125                     43438372 131 -  43563597 t-ttttttt-tttt---ta-gtagagatggggtttcgccatgttgaccaggatggtcccgatctgctgacctt--gtgatttgcctgccttggcctcccaaagtgctggaattacaggcatgaacca-----ccatgcccagcc
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4451192 125 -   4543643 t-t-------tttt---ta-gtagagatggggtttcgccatgttgaccaggatggtcccgatctgctgacctt--gtgatttgcctgccttagcctcccaaagtgctggaattacaggcatgagcca-----ccatgcccagcc
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         2945 119 +     29742 -----------------ta-gtagagatggggtttcgccatgttgaccagcatggtcccgatctgctgacctt--gtgatttgcctgccttggcctcccaaagtgctgggattacaggcctgagcca-----ccacgctcagcc
i Miopithecus_ogouensis.k141_2935907                    I 1 C 0
s Nasalis_larvatus.k141_153429                               9421 122 +     48152 t-t-------t------ta-gtagagatggggtttcaccatgttggccaggatggtcccgatctgctgacctt--gtgatttgcctgccttggcctcccaaagtgctgggactacaggcatgagcca-----ccacgcccagcc
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Nomascus_annamensis.k141_224620                              11 122 -      2316 c-t-------t------ta-gtagagatggggtttcaccatgttggccaggatggtcccgatctgttgacctt--gtgatttgcctgcctcggcctcccaaagtgctgggattacaggcgtgagcca-----ctgcgcccagcc
i Nomascus_annamensis.k141_224620                       n 122 I 162
s Nomascus_concolor.k141_226614                              2108 122 -      5092 c-t-------t------ta-gtagagatggggtttcgccatgttggccaggatggtcccgatctgttgacctt--gtgatttgcctgcctcggcctcccaaagtgctgggattacaggcgtgagcca-----ctgcgcccagcc
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_1004198                            671 122 +      1448 c-t-------t------ta-gtagagatggggtttcaccatgttggccaggatggtcccgatctgttgacctt--gtgatttgcctgcctcggcctcccaaagtgctgggattacaggcgtgagcca-----ctgcgcccagcc
i Nomascus_gabriellae.k141_1004198                      C 0 C 0
s Nomascus_siki_a.k141_1035055                                  422 122 -      3602 c-t-------t------ta-gtagagatggggtttcaccatgttggccaggatggtcccgatctgttgacctt--gtgatttgcctgcctcggcctcccaaagtgctgggattacaggcgtgagcca-----ctgcgcccagcc
i Nomascus_siki_a.k141_1035055                            I 291 I 39
s Pan_paniscus.CM003386.1                               127575530 122 - 205426864 t-t-------t------ta-gtggagatggggtttcaccatgttggccaggatggtcccgatctgtggacctt--gtgatttgcctgcctcggcctcccaaagtgctgggatcacaggcgtgagcta-----ctgcgcccagct
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120152684 122 - 196562556 t-t-------t------ta-gtggagatggggtttcaccatgttggccaggatggtcccgatctgtggacctt--gtgatttgcctgcctcggcctcccaaagtgctgggatcacaggcgtgagcta-----ctgcgcccagct
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Papio_anubis.CM001492.2                               188157173 128 - 188283584 t-t-------tttttttta-gtagagatggggtttcgccatgttgaccaggatggtcccgatctgctgacctt--gtgatttgcctgccttggcctcccaaagtgctgggattacaggcatgagcca-----ccatgcccagcc
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                               265 128 +     25005 T-T-------TTTTTTTTa-gtagagatggggtttcgccatgttgaccaggatggtcccgatctgctgacctt--gtgatttgcctgccttggcctcccaaagtgctgggattacaggcatgagcca-----ccatgcccagcc
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47514551 127 +  47705337 t-t-------tttttttca-gtagagatggggtttcgccatgttgaccaggatggtcccgatctgctgacctt--gtgatttgcctgccttggcctcccaaagtgctgggattacaggcgtgagcca-----ccatgccc-gcc
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 68535 129 -    104429 t-t-------ttttttttaagtagatatggggtttagccaagtttacccagatggtccccaaatgctgaccca--gtgatttgccagccttggccacccaaagtgcagggattacaggcgtgagcca-----ccatgcccagcc
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    7069 128 +     14967 t-t-------tttttttta-gtagagatggggtttcgccatgttgaccaggatggtcccgatctgctgacctt--gtgatttgcctgccttggcctcccaaagtgctgggattacaggcgtgagcca-----ccatgcccagcc
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 2930 128 -      7628 t-t-------tttttttc-agtagagatggggtttcgccatgttgaccaggatggtcccgatctgctgaccct--gtgatttgcctgccttggcctcccaaagtgctgggattacaggcgtgagcca-----ccatgcccagcc
i Papio_ursinus.k141_1345919                            C 0 C 0
s Piliocolobus_badius.k141_1987485                           2950 122 -      5908 t-t-------t------ta-gtagagatggggtttcaccatgttggccaggatggtcccgatctgctgacctt--gtgatttgcctgccttggcctcccaaagtgctgggactacaggcatgagcca-----ccacacccagcc
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       3572 118 -     17985 ------------------a-gtagagatggggtttcaccatgttggccaggatggtcccgatctgctgacctt--gtgatttgcctgccttggcctcccaaagtgctgggactacaggcatgagcca-----ccacacccagcc
i Piliocolobus_gordonorum.k141_1270531                  I 2 C 0
s Piliocolobus_kirkii.k141_929665                            2939 118 +      7694 ------------------a-gtagagatggggtttcaccatgttggccaggatggtcccgatctgctgacctt--gtgatttgcctgccttggcctcccaaagtgctgggactacaggcatgagcca-----ccacacccagcc
i Piliocolobus_kirkii.k141_929665                       I 2 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26741423 118 +  26888534 ------------------a-gtagagatggggtttcaccatgttggccaggatggtcccgatctgctgacctt--gtgatttgcctgccttggcctcccaaagtgctgggactacaggcatgagcca-----ccacacccagcc
i Piliocolobus_tephrosceles.PDMG02000036.1              I 2 C 0
s Pongo_abelii.NDHI03003816.1                              188050 122 -    373494 c-t-------t------ta-gtagagatggggtttcaccatgttggccaggatggtcccgatctgttgacctt--gtgatttgcctgcctcggcctcccaaagtgctgggatcacaggcgtgagcca-----ccccacctagcC
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19808698 122 +  19899266 c-t-------t------ta-gtagagatggggtttcaccatgttggccaggatggtcccgatctgttgacctt--gtgatttgcctgcctcggcctcccaaagtgctgggatcacaggcgtgagcca-----ccccacctagcc
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               6700 122 -     15069 t-t-------t------ta-gtagagatggggtttcaacatgttggccaggatggtcccgatctgctgacctt--gtgatttgcctgccttggcctcccaaagtgctgggactacaggcatgagcca-----ccatgcccagcc
i Presbytis_comata.k141_672698                          I 31 C 0
s Presbytis_mitrata.k141_860013                              6815 122 +     14865 t-t-------t------ta-gtagagatggggtttcaccatgttggccaggatgatcctgatctgctgacctt--gtgatttgcctgccttggcctcccaaagtgctgggactacaggcatgagcca-----ccacgcccagcc
i Presbytis_mitrata.k141_860013                         I 20 C 0
s Pygathrix_cinerea.k141_374971                             30816 109 +     56732 t-t-------t------ta-gtagagatg-------------ttggccaggatggtcccgatctgctgacctt--gtgatttgcctgccttggcctcccaaagtgctgggactacaggcatgagcca-----ccacgcccagcc
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6807297 122 +   6970761 t-t-------t------ta-gtagagatggggtttcaccatgttggccaggatggtcccgatctgctgacctt--gtgatttgcctgccttggcctcccaaagtgctgggactacaggcatgagcca-----ccacgcccagcc
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             6690 122 +     18040 t-t-------t------ta-gtagagatggggtttcaccatgttggccaggatggtcccgatctgctgacctt--gtgatttgcctgccttggcctcccaaagtgctgggactacaggcatgagcca-----ccacgcccagcc
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rhinopithecus_bieti.k119_554384                            1087 122 -     17045 t-t-------t------ta-gtagagatggggtttcaccatgttggccaggatggtcccggtctgctgacctt--gtgatttgcctgccttggcctcccaaagtgctgggactacaggcatgagcca-----ccacgcccagcc
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206378575 122 - 206558726 t-t-------t------ta-gtagagatggggtttcaccatgttggccaggatggtcccgatctgctgacctt--gtgatttgcctgccttggcctcccaaagtgctgggactacaggcatgagcca-----ccacgcccagcc
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44857477 122 -  45163003 t-t-------t------ta-gtagagatggggtttcaccatgttggccaggatggtcccggtctgctgacctt--gtgatttgcctgccttggcctcccaaagtgctgggactacaggcatgagcca-----ccacgcccagcc
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Semnopithecus_entellus.k141_1572367                        4307 122 +     15331 T-t-------t------ta-gtagagatggggtttcaccatgttggccaggatggtcccgatctgctgacctt--gtgatttgcctgccttggcctcccaaagtgctgggactacaggcatgagcca-----ccatgcccagcc
i Semnopithecus_entellus.k141_1572367                   I 39 C 0
s Semnopithecus_hypoleucos.k141_761524                       9683 121 +     20762 t-t-------t------ta-gtagagatggg-tttcaccatgttggccaggatggtcccgatctgctgacctt--gtgatttgcctgccttggcctcccaaagtgctgggactacaggcatgagcca-----ccatgcccagcc
i Semnopithecus_hypoleucos.k141_761524                  I 22 C 0
s Semnopithecus_johnii.k141_785014                         119688 122 +    130994 G-T-------t------ta-gtagagatggggtttcaccatgttggccaggatggtcccgatctgctgacctt--gtgatttgcctgccttggcctcccaaagtgctgggactacaggcatgagcca-----ccgcgcccagcc
i Semnopithecus_johnii.k141_785014                      I 24 C 0
s Semnopithecus_priam.k141_410937                           38466 122 +     46263 t-t-------t------ta-gtagagatggggtttcaccatgttggccaggatggtcccgatctgctgacctt--gtgatttgcctgccttggcctcccaaagtgctgggactacaggcatgagcca-----ccatgcccagcc
i Semnopithecus_priam.k141_410937                       I 16 C 0
s Semnopithecus_schistaceus.k141_387461                     31611 122 +     42640 T-t-------t------ta-gtagagatggggtttcaccatgttggccaggatggtcccgatctgctgacctt--gtgatttgcctgccttggcctcccaaagtgctgggactacaggcatgagcca-----ccatgcccagcc
i Semnopithecus_schistaceus.k141_387461                 I 41 C 0
s Semnopithecus_vetulus.k141_1143185                        14633 122 +     30600 G-T-------t------ta-gtagagatggggtttcaccatgttggccaggatggtcccgatctgctgacctt--gtgatttgcctgccttggcctcccaaagtgctgggactacaggcttgagcca-----ccatgcccagcc
i Semnopithecus_vetulus.k141_1143185                    I 24 C 0
s Symphalangus_syndactylus.tarseq_24                        15807 122 -  13920577 c-t-------t------ta-gtagagatggggtttcaccatgttggccaggatggccccgatctgttgacctt--gtgatttgcctgcctcggcctcccaaagtgctgggattacaggcgtgagcca-----ctgcgcccagcc
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Theropithecus_gelada.CM009951.1                       194008701 128 - 194193292 t-t-------tttttttta-gtagagatggggtttcgccacgttgaccaggatggtcccgatctgctgacctt--gtgatttgcctgccttggcctcccaaagtgctgggattacaggcgtgagcca-----ccatgcccagcc
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Trachypithecus_auratus.k141_738098                        27794 120 +     38948 ----------t------ta-gtagagatggggtttcaccatgttggccaggatggtcccgatctgctgacctt--gtgatttgcctgccgtggcctcccaaagtgctgggactacaggcatgagcca-----ccatgcccagcc
i Trachypithecus_auratus.k141_738098                    I 28 C 0
s Trachypithecus_crepusculus.k141_1588528                   21514 122 -     32910 t-t-------t------ta-gtagagatggggtttcaccatgttggccaggatggtcccgatctgctgacctt--gtgatttgcctgccttggcctcccaaagtgctgggactacaggcatgagcca-----ccatgcccagcc
i Trachypithecus_crepusculus.k141_1588528               I 16 C 0
s Trachypithecus_cristatus.k141_1011511                      2928 120 -     12939 ----------t------ta-gtagagatggggtttcaccatgttggccaggatggtcccgatctgctgacctt--gtgatttgcctgccgtggcctcccaaagtgctgggactacaggcatgagcca-----ccatgcccagcc
i Trachypithecus_cristatus.k141_1011511                 I 44 C 0
s Trachypithecus_francoisi.k141_768164                       2844 122 -     14244 t-t-------t------ta-gtagagatggggtttcaccatgttggccaggatggtcccgatctgttgacctt--gtgatttgcctgccgtggcctcccaaagtgctgggactacaggcatgagcca-----ccatgcccagcc
i Trachypithecus_francoisi.k141_768164                  I 24 C 0
s Trachypithecus_geei.k141_670367                           44241 122 -     54611 t-t-------t------ta-gtagagatggggtttcaccatgttggccaggatggtcccgatctgctgacctt--gtgatttgcctgccttggcctcccaaagtgctgggactacaggcatgagcca-----ccatgcccagcc
i Trachypithecus_geei.k141_670367                       I 22 C 0
s Trachypithecus_germaini.k141_868450                        2040 120 -     11566 ----------t------ta-gtagagatggggttttaccatgttggccaggatggtcccgatctgctgacctt--gtgatttgcctgccttggcctcccaaagtgctgggactacaggcatgagcca-----ccatgcccagcc
i Trachypithecus_germaini.k141_868450                   I 18 C 0
s Trachypithecus_hatinhensis.k141_504423                     4221 122 -     15592 t-t-------t------ta-gtagagatggggtttcaccatgttggccaggatggtcccgatctgctgacctt--gtgatttgcctgccttggcctcccaaagtgctgggactacaggcatgagcca-----ccatgcccagcc
i Trachypithecus_hatinhensis.k141_504423                I 22 C 0
s Trachypithecus_laotum.k141_760702                          2873 122 +     14371 t-t-------t------ta-gtagagatggggtttcaccatgttggccaggatggtcccgatctgctgacctt--gtgatttgcctgccttggcctcccaaagtgctgggactacaggcatgagcca-----ccatgcccagcc
i Trachypithecus_laotum.k141_760702                     I 18 C 0
s Trachypithecus_leucocephalus.k141_381681                   1160 122 +     12481 t-t-------t------ta-gtagagatggggtttcaccatgttggccaggatggtcccgatctgttgacctt--gtgatttgcctgccgtggcctcccaaagtgctgggactacaggcatgagcca-----ccatgcccagcc
i Trachypithecus_leucocephalus.k141_381681              I 24 C 0
s Trachypithecus_melamera.k141_699241                        1034 122 -     24393 t-t-------t------ta-gtagagatggggtttcaccatgttggccaggatggtcccgatctgctgacctt--gtgatttgcctgccttggcctcccaaagtgctgggactacaggcatgagcca-----ccatgcccagcc
i Trachypithecus_melamera.k141_699241                   I 22 C 0
s Trachypithecus_obscurus.k141_1115109                       6284 122 -     28054 t-t-------t------ta-gtagagatggggtttcaccatgttggccaggatggtcccgatctgctgacctt--gtgatttgcctgccttggcctcccaaagtgctgggactacaggcgtgagcca-----ccatgcccagcc
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44661068 122 -  44834318 t-t-------t------ta-gtagagatggggtttcaccatgttggccaggatggtcccgatctgctgacctt--gtgatttgcctgccttggcctcccaaagtgctgggactacaggcatgagcca-----ccatgcccagcc
i Trachypithecus_phayrei.ctg3                           I 10 C 0
s Trachypithecus_pileatus.k141_1022309                       3384 122 +     13828 t-t-------t------ta-gtagagatggggtttcaccatgttggccaggatggtcccgatctgctgacctt--gtgatttgcctgccttggcctcccaaagtgctgggactacaggcatgagcca-----ccatgcccagcc
i Trachypithecus_pileatus.k141_1022309                  I 18 C 0
e Eptesicus_fuscus.JH977687.1                             4707549   0 +   6522550 C
e Macroglossus_sobrinus.MacSob_scaffold_879                701732  90 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             39436   0 -     47444 C
e Petromus_typicus.PetTyp_scaffold_33007                    14226   0 -     36578 C
e Sorex_araneus.JH798170.1                               17767061   0 -  27805282 C
e Dinomys_branickii.DinBra_scaffold_1996                   157598   0 +    228994 C
e Erinaceus_europaeus.JH835290.1                         11534859   0 +  16010500 C
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           3364   0 -      6963 C
e Aplodontia_rufa.AprRuf_scaffold_156013                     4258  12 +      5067 I
e Oryctolagus_cuniculus.CM000803.1                      141876917   0 + 163896628 C
e Ochotona_princeps.JH802095.1                            4996634   0 -  23139505 C
e Lepus_americanus.LepAme_scaffold_62849                    13880   0 +     22452 C
e Perognathus_longimembris.PerPac_flattened_line_19359        641   5 +     49596 I
e Dipodomys_stephensi.DipSte_scaffold_44365                 28610   0 +     28912 C
e Dipodomys_ordii.KN672545.1                              3656967   0 +   4240102 C
e Suricata_suricatta.SurSur_flattened_line_20339            28181   0 +     62062 C
e Ziphius_cavirostris.ZipCav_flattened_line_127025           7520   0 -      8775 C
e Zalophus_californianus.ZalCal_flattened_line_4097        214889   0 -    227762 C
e Vulpes_lagopus.VulLag_flattened_line_2045                138908   0 -    281493 C
e Vicugna_pacos.KN269600.1                                1525269   0 -   2331223 C
e Ursus_maritimus.KK498671.1                              6515415   0 +  28682327 C
e Uropsilus_gracilis.UroGra_scaffold_69449                   1920   0 +     10241 C
e Tursiops_truncatus.MRVK01000923.1                      69314021   0 -  96451834 C
e Trichechus_manatus.JH594618.1                          16085939   0 +  31416278 C
e Tragulus_javanicus.TraJav_scaffold_14717                   5750   0 +     90398 C
e Tonatia_saurophila.TonSau_scaffold_3334                  136665   0 -    259118 C
e Tolypeutes_matacus.TolMat_scaffold_269431                  6100   0 +      6782 C
e Tapirus_terrestris.TapTer_scaffold_14939                  58440   0 +     99546 C
e Tapirus_indicus.TapInd_scaffold_176                      807728   0 +   1148477 C
e Tamandua_tetradactyla.TamTet_scaffold_26877               15294   0 +     45698 C
e Tadarida_brasiliensis.TadBra_scaffold_61492                 878   0 +     20549 C
e Sus_scrofa.CM000824.4                                 189272699   0 + 218635234 C
e Spilogale_gracilis.SpiGra_flattened_line_905             235418   0 -    276980 C
e Solenodon_paradoxus.SolPar_flattened_line_1012            19485  11 +    739146 I
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   32880   0 -    114521 C
e Saiga_tatarica.SaiTat_scaffold_82192                       8546   0 +     12214 C
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                19923   0 +    109198 C
e Rhinolophus_sinicus.LVEH01000179.1                      1788458   0 +   2252614 C
e Rangifer_tarandus.RanTarSib_scaffold_24239                16389   0 +     68503 C
e Puma_concolor.QAVW01000427.1                          131534966   0 - 161321710 C
e Pteropus_vampyrus.KN525959.1                             604541   0 -   3946241 C
e Pteropus_alecto.KB031157.1                             13246590   0 -  17261082 C
e Pteronura_brasiliensis.PteBra_flattened_line_1343        247294   0 -    344369 C
e Pteronotus_parnellii.KE867983.1                            4678   0 -     27784 C
e Procavia_capensis.ProCapCap_scaffold_149274                2467 1156 -      9567 I
e Platanista_gangetica.PlaMin_flattened_line_72990           5996   0 +     21690 C
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Phocoena_phocoena.PhoPho_flattened_line_11948            121909   0 -    122454 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    116408   0 -    135482 C
e Pantholops_hodgsonii.KE114631.1                         1066721   0 -   1292953 C
e Panthera_tigris.KE721879.1                              5028371   0 -   6340057 C
e Panthera_pardus.KV860323.1                              3638695   0 +  18214204 C
e Panthera_onca.PanOnc_flattened_line_1615                  34945   0 +    295523 C
e Ovis_canadensis.OviCan_scaffold_6251                      79086   0 +    140051 C
e Ovis_aries.CM001582.2                                 134077871   0 - 275406953 C
e Otocyon_megalotis.JAEUCK010005121.1                      308812   0 -    505867 C
e Orycteropus_afer.OryAfe_flattened_line_13509              60549   0 -     66828 C
e Orcinus_orca.KB316965.1                                 7225305   0 -   7562323 C
e Okapia_johnstoni.LVCL01S0017931.1                         37593   0 +     78940 C
e Odocoileus_virginianus.KZ101650.1                       1080275   0 +   1425656 C
e Odobenus_rosmarus.KB229369.1                             680162   0 -   3126709 C
e Nyctereutes_procyonoides.CAJHUB010000786.1                31528   0 +   3668941 C
e Noctilio_leporinus.NocLep_scaffold_12062                  50214  77 +     94413 I
e Neophocaena_asiaeorientalis.KZ688543.1                  3951620   0 -   4490290 C
e Neomonachus_schauinslandi.NINY01007774.1                4485495   0 -  14209539 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             5628   0 -      8794 C
e Myotis_myotis.MyoMyo_scaffold_6123                        12401   0 +     66751 C
e Myotis_lucifugus.GL429887.1                             3467158   0 -   3747815 C
e Myotis_davidii.KB114863.1                               5021080   0 +   6462685 C
e Myotis_brandtii.KE161952.1                               969656   0 +   8389877 C
e Mustela_putorius.JH417978.1                             4424983   0 -  28371801 C
e Murina_feae.MurFea_scaffold_2254                          22038   0 -    100666 C
e Mungos_mungo.MunMun_flattened_line_8729                  145521   0 -    168139 C
e Moschus_moschiferus.MosMos_scaffold_78805                  2095   0 -     19904 C
e Mormoops_blainvillei.MorMeg_scaffold_2952                162039   0 +    265003 C
e Monodon_monoceros.MonMon_M_scaffold_5598                 147008   0 +    154973 C
e Mirounga_angustirostris.MirAng_flattened_line_8852        12105   0 -    104932 C
e Miniopterus_schreibersii.MinSch_scaffold_24116            35177   0 +     45743 C
e Miniopterus_natalensis.LDJU01000022.1                   8210688   0 +  10048721 C
e Micronycteris_hirsuta.MicHir_scaffold_37978               23515   0 -     32043 C
e Microgale_talazaci.MicTal_scaffold_34660                  35528   0 -     48017 C
e Mesoplodon_bidens.MesBid_scaffold_227248                    907   0 -      1377 C
e Mellivora_capensis.MelCap_flattened_line_15433             1615   0 -     87323 C
e Megaderma_lyra.MegLyr_scaffold_3562                       64783 239 -    234502 I
e Manis_pentadactyla.KN017078.1                             36816   0 +     58827 C
e Manis_javanica.JSZB01003966.1                            146673   0 +    252755 C
e Lycaon_pictus.CM007556.1                               11088727   0 +  39895028 C
e Loxodonta_africana.GL010040.1                          20595417   0 -  62548349 C
e Lipotes_vexillifer.KE558548.1                            136580   0 +   3060487 C
e Leptonychotes_weddellii.KB714749.1                      3086589   0 -   3498232 C
e Lasiurus_borealis.LasBor_scaffold_59542                    4384   0 +     26176 C
e Kogia_breviceps.KogBre_flattened_line_35920               24230   0 +     37189 C
e Inia_geoffrensis.IniGeo_flattened_line_66725               9623   0 +     17520 C
e Hyaena_hyaena.HyaHya_flattened_line_20729                 17893   9 -     67322 I
e Hipposideros_galeritus.HipGal_scaffold_104691              8154 325 -      9143 I
e Hipposideros_armiger.JXIK01001085.1                      279004   0 -    477199 C
e Hippopotamus_amphibius.HipAmp_scaffold_1308              147723   0 +    277961 C
e Heterohyrax_brucei.HetBruBak_scaffold_25354               61360 1157 +     73687 I
e Hemitragus_hylocrius.HemHyl_scaffold_16669                28080   0 -     91191 C
e Helogale_parvula.HelPar_flattened_line_22962              17826   0 +     53719 C
e Giraffa_tippelskirchi.LVKQ01S012154.1                    181865   0 -    189561 C
e Felis_nigripes.FelNig_flattened_line_8080                 21802   0 +     52776 C
e Felis_catus_fca126.CM031420.1                         129280662   0 - 158578461 C
e Eubalaena_japonica.EubJap_flattened_line_7756             62087   0 +     89355 C
e Eschrichtius_robustus.EscRob_flattened_line_685          315634   0 +    330699 C
e Equus_przewalskii.ATBW01073585.1                          13576   0 +     92910 C
e Equus_caballus.CM000402.2                              13352087   0 +  41866177 C
e Equus_asinus.JREZ01000062.1                             5853582   0 -   7175178 C
e Enhydra_lutris.KZ291749.1                              85872803   0 +  99434291 C
e Elephantulus_edwardii.JH947210.1                        7816992 12417 +  15467074 I
e Elaphurus_davidianus.JRFZ01086400.1                     1492060   0 +   1727528 C
e Eidolon_helvum.KE772537.1                                 12858   0 +     24177 C
e Echinops_telfairi.JH980316.1                           22999536   0 -  44670279 C
e Diceros_bicornis.DicBicMic_scaffold_9545                   3794   0 +    151128 C
e Dicerorhinus_sumatrensis.PEKH010003161.1                 323142   0 +    993696 C
e Desmodus_rotundus.KZ672188.1                           18699611   0 -  18957592 C
e Delphinapterus_leucas.KZ290064.1                       80037418   0 -  96802777 C
e Dasypus_novemcinctus.JH568778.1                          184239   0 -   6883506 C
e Cryptoprocta_ferox.CryFer_flattened_line_19014            52628   0 -     70449 C
e Crocidura_indochinensis.CroInd_scaffold_848148              199   0 +      1327 C
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1008 325 -      5782 I
e Condylura_cristata.JH655880.1                          60614198   0 +  78930452 C
e Choloepus_hoffmanni.KN194586.1                           762369   0 +    964067 C
e Choloepus_didactylus.ChoDid_scaffold_36182                17064   0 -     21363 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_160623         4247   0 -      9338 C
e Catagonus_wagneri.CatWag_scaffold_1305                   159479   0 -    276539 C
e Carollia_perspicillata.CarPer_scaffold_4436               60326   0 +     67245 C
e Capra_hircus.CM004562.1                               135707023   0 - 157403528 C
e Capra_aegagrus.CM003214.1                              21325795   0 + 157394656 C
e Canis_lupus_orion.HG994411.1                           16456286   0 -  44759192 C
e Canis_lupus_familiaris.chr31                           11089271   0 +  39895921 C
e Canis_lupus_dingo.QKWQ01001993.1                       11266737   0 -  35597290 C
e Canis_lupus_VD.CanFam_VD_scaffold_16982                   15096   0 +     87036 C
e CanFam4.chr31                                          11520070   0 +  39901454 C
e Camelus_ferus.KB016973.1                                2973602   0 +   6889770 C
e Camelus_dromedarius.KN271192.1                           397866   0 -  15254737 C
e Camelus_bactrianus.KN276303.1                           3220165   0 -   8989139 C
e Bubalus_bubalis.KI419065.1                              1233374   0 -   1914593 C
e Bos_taurus.CM000177.6                                 136296294   0 - 158972876 C
e Bos_mutus.JH883513.1                                     573102   0 -    998990 C
e Bos_indicus.CM003021.1                                138140561   0 - 161108492 C
e Bison_bison.KN264915.1                                  6560446   0 +   6870073 C
e Beatragus_hunteri.BeaHun_scaffold_21644                   43830   0 -     72089 C
e Balaenoptera_bonaerensis.DF502048.1                        5966   0 -     13118 C
e Balaenoptera_acutorostrata.KI537095.1                  26380794   0 +  51448160 C
e Artibeus_jamaicensis.ArtJam_scaffold_41619                 9539   0 -     29036 C
e Antilocapra_americana.AntAmePen_scaffold_42841            31302   0 +     33004 C
e Anoura_caudifer.AnoCau_scaffold_422                      391119   0 -    631301 C
e Ammotragus_lervia.NIVO01013474.1                        3520720   0 +   4113121 C
e Ailurus_fulgens.LNAC01000003.1                          7095279   0 -  16596857 C
e Ailuropoda_melanoleuca.LNAT01000321.1                  10657927   0 +  23371972 C
e Acinonyx_jubatus.LLWD01000356.1                         2034611   0 +   3721120 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19596   0 -    119109 C
e Glis_glis.GliGli_scaffold_79770                           14364   0 -     18683 C
e Zapus_hudsonius.ZapHud_scaffold_64392                     16436   0 -     20485 C
e Jaculus_jaculus.JH725517.1                              8566539   0 +  11848649 C
e Allactaga_bullata.AllBul_scaffold_70162                   17525   0 -     22067 C
e Galeopterus_variegatus.GalVar_scaffold_354               156907   0 +    324696 C
e Microtus_ochrogaster.CM001673.1                        22820341   4 -  98408828 I
e Xerus_inauris.XerIna_scaffold_7898                       127482   5 -    134049 I
e Varecia_variegata.k141_775891                             25501   3 -     33872 I
e Varecia_rubra.k141_432109                                  5966   3 -     20643 I
e Tupaia_tana.TupTan_flattened_line_68454                    5906   0 +     13056 C
e Tupaia_chinensis.KB320831.1                             2793720   0 -   3938065 C
e Tarsius_wallacei.k141_48636                               60408   0 +     65473 C
e Tarsius_lariang.k141_609102                               27092   0 +     42269 C
e Spermophilus_dauricus.KZ294190.1                        2240365   5 +   2842873 I
e Sigmodon_hispidus.SigHis_scaffold_11332                  100871   0 -    120886 C
e Sapajus_macrocephalus.k141_966464                         21380   0 -     62485 C
e Sapajus_apella.ctg10                                   17342019   0 -  30362882 C
e Saimiri_ustus.k141_1282476                                 5292   0 -     76454 C
e Saimiri_sciureus.k141_1947592                              5355   0 +     60816 C
e Saimiri_oerstedii.k141_841116                              5377   0 +     67014 C
e Saimiri_macrodon.k141_2087127                              5284   0 -     60842 C
e Saimiri_cassiquiarensis.k141_808270                        5342   0 +     34089 C
e Saimiri_boliviensis.NW_024100938.1                     15673429   0 -  43202129 C
e Rattus_norvegicus.chr11                                13915860 1475 +  90463843 I
e Psammomys_obesus.NESX01026517.1                           36081   2 +     77221 I
e Propithecus_verreauxi.k141_158021                         39953   3 -     48185 I
e Propithecus_tattersalli.k141_907138                       17689   3 -     53241 I
e Propithecus_perrieri.k141_7554                            18055   3 +     27322 I
e Propithecus_edwardsi.k141_1317105                         36132   3 -     44753 I
e Propithecus_diadema.k141_577245                           43745   3 +     52369 I
e Propithecus_coronatus.k141_1353159                         4402   3 +     11805 I
e Propithecus_coquerelli.NW_012147863.1                     19492   3 -     30946 I
e Prolemur_simus.MPIZ01000048.1                           6849325   3 +  12164890 I
e Plecturocebus_moloch.k141_890597                          24007   0 -     75465 C
e Plecturocebus_miltoni.k141_841561                         13420   0 +    134592 C
e Plecturocebus_hoffmannsi.k141_985533                       1414   0 -    119457 C
e Plecturocebus_grovesi.k141_242819                         23697   0 +    152463 C
e Plecturocebus_dubius.k141_3565563                          4343   0 -     55515 C
e Plecturocebus_cupreus.k141_1145860                          260   0 -     43940 C
e Plecturocebus_cinerascens.k141_744510                     23624   0 +    147771 C
e Plecturocebus_caligatus.k141_2539816                      14024   0 -     98129 C
e Plecturocebus_brunneus.k141_498086                        23784   0 +     67491 C
e Plecturocebus_bernhardi.k141_959214                       23572   0 +     44506 C
e Pithecia_vanzolinii.k141_831006                           14232   0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13475329   0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          6329   0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        13101   0 -     16101 C
e Pithecia_hirsuta.k141_1152968                              9902   0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        25855   0 +     78826 C
e Pithecia_albicans.k141_991845                             44470   0 -     61926 C
e Peromyscus_maniculatus.KI615518.1                       4950937   0 -   8017169 C
e Perodicticus_potto.k141_713187                            25474   3 -     27972 I
e Perodicticus_ibeanus.k141_117958                           6160   3 -     23713 I
e Otolemur_garnettii.GL873528.1                          18009456   3 -  38779656 I
e Otolemur_crassicaudatus.k141_505435                        1475   3 -     53940 I
e Onychomys_torridus.OnyTor_scaffold_12578                  37690   6 +     62360 I
e Ondatra_zibethicus.OndZib_scaffold_6821                  125594   4 +    145789 I
e Octodon_degus.JH651621.1                                3686495   0 +  10294119 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65670190   0 +  89412551 C
e Nycticebus_coucang.k141_2051882                            4581   0 +      6470 C
e Nycticebus_bengalensis.LG16                            65567855   0 -  95554990 C
e Nannospalax_galili.KL201303.1                            119159   6 +    362372 I
e Myocastor_coypus.MyoCoy_scaffold_3653                     91001   0 -    117718 C
e Muscardinus_avellanarius.MusAve_scaffold_9643             12869   0 +     98495 C
e Mus_spretus.CM004110.1                                 74333150   0 +  97876770 C
e Mus_pahari.LT608305.1                                  67556618   0 +  89017189 C
e Mus_musculus.chr16                                     75490415   0 +  98207768 C
e Mus_caroli.LT608236.1                                  70767338   0 +  92629107 C
e Mirza_zaza.k141_226143                                     6369   3 +      8497 I
e Microcebus_murinus.CM007691.1                          16510980   3 +  47401472 I
e Mesocricetus_auratus.KB708139.1                         1047499   8 -  26018355 I
e Meriones_unguiculatus.MerUng_scaffold_52233               13799   2 +     15977 I
e Marmota_marmota.CZRN01000005.1                         36874268   5 +  64221397 I
e Loris_tardigradus.ctg97                                 3779150   0 +   6799190 C
e Loris_lydekkerianus.k141_550999                           11401   0 +     84689 C
e Lepilemur_septentrionalis.k141_578524                     32347   3 -     33031 I
e Lepilemur_ruficaudatus.k141_617879                        79356   3 +    116806 I
e Lepilemur_dorsalis.k141_134267                            54094   3 +     63517 I
e Lepilemur_ankaranensis.k141_884009                        24708   3 +     39228 I
e Lemur_catta.scaffold_1                                258407958   3 - 285822530 I
e Lagothrix_lagothricha.k141_12968                          50864   0 -    147782 C
e Indri_indri.k141_5141390                                   1122   3 -      3181 I
e Ictidomys_tridecemlineatus.JH393315.1                   7126449   5 +  13083262 I
e Hystrix_cristata.HysCri_scaffold_50788                     6758   0 +     22540 C
e Heterocephalus_glaber.JH602058.1                        2551694   0 +  31725842 C
e Hapalemur_occidentalis.k141_797938                        46279   3 -     54384 I
e Hapalemur_meridionalis.k141_186231                        29651   3 -     42470 I
e Hapalemur_griseus.k141_1387522                             6402   3 +     56096 I
e Hapalemur_gilberti.k141_279011                             1076   3 -     11661 I
e Hapalemur_alaotrensis.k141_1280836                         2596   3 +     10286 I
e Graphiurus_murinus.GraMur_scaffold_4493                   77863   0 +    118900 C
e Galagoides_demidoff.k141_1769638                          11100   3 +     27357 I
e Galago_senegalensis.k141_964197                           14034   3 -     43889 I
e Galago_moholi.ctg555                                     211660   3 -    847004 I
e Fukomys_damarensis.KN123630.1                          13891783 308 -  19261668 I
e Eulemur_sanfordi.k141_186399                              16595   3 -     29447 I
e Eulemur_rufus.k141_1620292                                33869   3 +     46535 I
e Eulemur_rubriventer.k141_411740                           19131   3 +     26808 I
e Eulemur_mongoz.k141_825972                                16675   3 +     27497 I
e Eulemur_fulvus.k141_653297                                12015   3 +    109717 I
e Eulemur_flavifrons.k141_903901                             8537   3 +     60246 I
e Eulemur_coronatus.k141_3240342                            12216   3 +     36558 I
e Eulemur_collaris.k141_311830                               5742   3 -      6809 I
e Eulemur_albifrons.k141_715837                              5810   3 +     13586 I
e Ellobius_talpinus.LOJH01090055.1                           7151   4 -      7838 I
e Ellobius_lutescens.LOEQ01003611.1                        240029   1 -    369425 I
e Dolichotis_patagonum.DolPat_scaffold_14102                36687   0 -     73477 C
e Daubentonia_madagascariensis.ctg11                     16845635   3 +  31942871 I
e Dasyprocta_punctata.DasPun_flattened_line_634             59461   0 -    236241 C
e Cuniculus_paca.CunPac_flattened_line_16637                18370   0 +     26546 C
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 31676   0 -     67205 C
e Ctenodactylus_gundi.CteGun_scaffold_447                  209031   0 -    956709 C
e Cricetulus_griseus.LT883672.1                          53029812  13 +  72327488 I
e Cricetomys_gambianus.CriGam_scaffold_949                 279153   0 -    399297 C
e Chiropotes_sagulatus.k141_773804                          16013   0 +     40510 C
e Chiropotes_israelita.k141_1189915                         71833   0 +    196370 C
e Chinchilla_lanigera.JH721867.1                         15962331   0 +  43084221 C
e Cheracebus_torquatus.k141_315545                          47026   0 +     54541 C
e Cheracebus_regulus.k141_2128895                           42347   0 +     57117 C
e Cheracebus_lugens.k141_203936                             23307   0 +     25473 C
e Cheracebus_lucifer.k141_619653                             6289   0 -     18223 C
e Cheirogaleus_medius.k141_133808                            8812   3 +     13308 I
e Cheirogaleus_major.k141_1157592                           59764   3 -     68416 I
e Cephalopachus_bancanus.k141_702587                         8664   0 +     21754 C
e Cebus_unicolor.k141_239009                                13261   0 +     25043 C
e Cebus_olivaceus.k141_93739                                 9018   0 -     26817 C
e Cebus_albifrons.Contig22                               18891474   0 -  29618158 C
e Cavia_tschudii.CavTsc_scaffold_488                       177368   0 +    436027 C
e Cavia_porcellus.DS562889.1                             15799177   0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15787241   0 -  24422027 C
e Castor_canadensis.CasCan_scaffold_47037                   31717   7 +     33760 I
e Carlito_syrichta.NW_007248099.1                          309640   0 +    345090 C
e Cacajao_melanocephalus.k141_1160263                        8247   0 -    134917 C
e Cacajao_hosomi.k141_303789                                15704   0 -    216513 C
e Cacajao_calvus.k141_96166                                 13661   0 +    125063 C
e Cacajao_ayresi.k141_724503                               114632   0 -    171031 C
e Avahi_peyrierasi.k141_798820                               1105   3 +      6337 I
e Avahi_laniger.k141_2840928                                 7489   3 -     16375 I
e Ateles_paniscus.k141_1631200                               6745   0 -     25888 C
e Ateles_marginatus.k141_899112                             64774   0 +    119057 C
e Ateles_geoffroyi_a.k141_1300742                             16782   0 -     58268 C
e Ateles_chamek.k141_1072810                                12279   0 +     89302 C
e Ateles_belzebuth.k141_1348307                             61266   0 +     85812 C
e Ateles_geoffroyi_b.tarseq_2582                             9539995   0 +  39197703 C
e Arctocebus_calabarensis.k141_587554                        1753   3 +      9265 I
e Aotus_vociferans.k141_718647                               6726   0 +     23246 C
e Aotus_trivirgatus.k141_1740727                             6724   0 -    104377 C
e Aotus_nancymaae.KZ196176.1                              5750135   0 +   9889416 C
e Aotus_griseimembra.k141_3275623                            6178   0 +     22701 C
e Aotus_azarae.k141_3170768                                 63236   0 +     78111 C
e Alouatta_seniculus.k141_1531728                             741   0 -      1692 C
e Alouatta_puruensis.k141_1284840                            4606   0 -      4927 C
e Alouatta_palliata.k141_2764429                              526   0 -      1480 C
e Alouatta_nigerrima.k141_3537692                             613   0 +      1660 C
e Alouatta_macconnelli.k141_2177643                           564   0 -      1868 C
e Alouatta_juara.k141_1244470                                1180   0 +      2129 C
e Alouatta_discolor.k141_811576                             11557   0 -     21359 C
e Alouatta_caraya.k141_1710068                                601   0 +      1555 C
e Alouatta_belzebul.k141_1818029                            10884   0 -     18050 C
e Acomys_cahirinus.AcoCah_scaffold_1625                    113354   2 -    189883 I
e Nomascus_siki_b.tarseq_80                             25641  26 -  18771707 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               14576 39 +    209709 cagaa-tc-t-gggtc---------t-ta-------acc-a--gatttg-c-cattAT-----AAA--A-T-G
s Acinonyx_jubatus.LLWD01000356.1                         2034611 38 +   3721120 CAGAA-TA-T-G-------AGT--TT-TA-------ACT-A--GATTTG-T-CGTTAT-----AAA--A-T--
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    113356 34 -    189883 ---------G-A----GTCTGTACAT-TT-------AC--C---AGAT--T-TGTCAT-----AGA--A-T-G
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 2 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10657927 38 +  23371972 CAGAA-TC-T-G-------AG--CTT-TA-------ACT-A--GAT-TG-t-tgttat-----aaa--a-t-g
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7095279 39 -  16596857 CAGAA-TC-C-G-------AGT--TT-TA-------ACT-A--GATTTG-T-CATTAT-----ATA--A-T-T
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   17525 36 -     22067 CAGAA-GC-T-G-----AAT-T---T-TA-------AC--C---AGAA--T-TGTCAC-----GGA--A-T-G
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   2307 39 -     60446 CAGAA-TC-T-GGGTT---------T-TA-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         3024 39 -     29318 CAGAA-TC-T-GGGTT---------T-TA-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         1960 39 +     38766 CAGAA-TC-T-GGGTT---------T-TA-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          2918 39 -     80423 CAGAA-TC-T-GGGTT---------T-TA-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            10884 39 -     18050 CAGAA-TC-T-GGGTT---------T-TG-------ACC-A--GATTTG-C-GATTAC-----AAA--A-C-G
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_1710068                                601 39 +      1555 CAGAA-TC-T-GGGTT---------T-TG-------ACC-A--GATTTG-C-CATTAC-----AAA--A-C-G
i Alouatta_caraya.k141_1710068                          C 0 C 0
s Alouatta_discolor.k141_811576                             11557 39 -     21359 CAGAA-TC-T-GGGTT---------T-TG-------ACC-A--GATTTG-C-GATTAC-----AAA--A-C-G
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                1180 39 +      2129 CAGAA-TC-T-GGGTT---------T-TG-------ACC-A--GATTTG-C-CATTAC-----AAA--A-C-G
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_2177643                           564 39 -      1868 CAGAA-TC-T-GGGTT---------T-TG-------ACC-A--GATTTG-C-CATTAC-----AAA--A-C-G
i Alouatta_macconnelli.k141_2177643                     C 0 C 0
s Alouatta_nigerrima.k141_3537692                             613 39 +      1660 CAGAA-TC-T-GGGTT---------T-TG-------ACC-A--GATTTG-C-CATTAC-----AAA--A-C-G
i Alouatta_nigerrima.k141_3537692                       C 0 C 0
s Alouatta_palliata.k141_2764429                              526 39 -      1480 CAGAA-TC-T-GGGTT---------T-TG-------ACC-A--GATTTG-C-CATTAC-----AAA--A-C-G
i Alouatta_palliata.k141_2764429                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            4606 39 -      4927 CAGAA-TC-T-GGGTT---------T-TG-------ACC-A--GATTTG-C-CATTAC-----AAA--A-C-G
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_1531728                             741 39 -      1692 CAGAA-TC-T-GGGTT---------T-TG-------ACC-A--GATTTG-C-CATTAC-----AAA--A-C-G
i Alouatta_seniculus.k141_1531728                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3520720 39 +   4113121 AAGAA-GC-T-G----G-AT-T---T-TA-------ACT-G--gattta-t-ctttat-----aaa--a-t-g
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      391119 39 -    631301 CAAAG-TC-T-G----G---GT--TT-TA-------ACT-A--GATTTG-C-CATTAT-----AAA--A-T-G
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 I 13
s Antilocapra_americana.AntAmePen_scaffold_42841            31302 38 +     33004 CAGAA-GC-T-G----G-AT-T---T-TA-------ACT-G--GATTTA-T-CATTAT-----A-A--A-T-G
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 63236 39 +     78111 CAGAA-TC-T-AGGTT---------T-CG-------ACC-A--GATTTG-C-CATTAT-----AAA--A-T-G
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            6178 39 +     22701 CAGAA-TC-T-AGGTT---------T-CG-------ACC-A--GATTTG-C-CATTAT-----AAA--A-T-G
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5750135 39 +   9889416 CAGAA-TC-T-AGGTT---------T-CG-------ACC-A--GATTTg-c-cattat-----aaa--a-t-g
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             6724 39 -    104377 AAGAA-TC-T-AGGTT---------T-TG-------ACC-A--GATTTG-C-CATTAT-----AAA--A-T-G
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               6726 39 +     23246 AAGAA-TC-T-AGGTT---------T-TG-------ACC-A--GATTTG-C-CATTAT-----AAA--A-T-G
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     4270 39 +      5067 CCGAA-TG-T-G-------AGT--TT-TA-------GC--TAGTTTCA--T-CAATAT-----AAA--A-G-A
i Aplodontia_rufa.AprRuf_scaffold_156013                I 12 I 2
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 9539 39 -     29036 CAAAG-TC-T-G----G---GT--TT-TA-------ACT-A--GATTTG-C-CATTAT-----AAA--A-T-G
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 I 13
s Ateles_geoffroyi_b.tarseq_2582                             9539995 39 +  39197703 CAGAA-GC-T-GGGTT---------T-TG-------ACC-A--GATTTG-C-CATTAT-----AAA--A-T-G
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             61266 39 +     85812 CAGAA-GC-T-GGGTT---------T-TG-------ACC-A--GATTTG-C-CATTAT-----AAA--A-C-G
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                12279 39 +     89302 CAGAA-TC-T-GGGTT---------T-TG-------ACC-A--GATTTG-C-CATTAT-----AAA--A-C-G
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             16782 39 -     58268 CAGAA-GC-T-GGGTT---------T-TG-------ACC-A--GATTTG-C-CATTAT-----AAA--A-T-G
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             64774 39 +    119057 CAGAA-TC-T-GGGTT---------T-TG-------ACC-A--GATTTG-C-CATTAT-----AAA--A-C-G
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               6745 39 -     25888 CAGAA-GC-T-GGGTT---------T-TG-------ACC-A--GATTTG-C-CATTAT-----AAA--A-C-G
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26380794 44 +  51448160 CAGAA-GT-T-G----G---GT--TT-TA-------ACT-A--GATTTG-T-CATTGtatgacaaa--a-t-g
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        5966 44 -     13118 CAGAA-GT-T-G----G---GT--TT-TA-------ACT-A--GATTTG-T-CATTATatgacaaa--a-t-g
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   43830 39 -     72089 AAGAA-GC-T-G----G-AT-T---T-TA-------ACT-G--GATTTA-T-CATTAT-----AAA--A-T-G
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6560446 39 +   6870073 GAGAA-GC-T-G----G-AT-T---T-TA-------ACT-G--GATTTA-T-catgat-----aaa--a-t-g
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138140561 39 - 161108492 GAGAA-GC-T-G----G-AT-T---T-TA-------ACT-G--GATTTA-T-catgat-----aaa--a-t-g
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     573102 39 -    998990 GAGAA-GC-T-G----G-AT-T---T-TA-------ACT-g--gattta-t-cattat-----aaa--a-t-g
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136296294 39 - 158972876 GAGAA-GC-T-G----G-AT-T---T-TA-------ACT-G--GATTTA-T-catgat-----aaa--a-t-g
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1233374 39 -   1914593 CAGAA-GC-T-G----G-AT-T---T-TA-------ACT-G--GATTTA-T-catgat-----aaa--a-t-g
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               114632 39 -    171031 CAGAA-TC-T-GGGTT---------T-TG-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 13661 39 +    125063 CAGAA-TC-T-GGGTT---------T-TG-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                15704 39 -    216513 CAGAA-TC-T-GGGTT---------T-TG-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        8247 39 -    134917 CAGAA-TC-T-GGGTT---------T-TG-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3220165 39 -   8989139 CAGAA-GC-T-G----G---GT--TT-TA-------ACT-A--AATTtg-t-cattat-----aaa--a-t-g
i Camelus_bactrianus.KN276303.1                         C 0 I 8
s Camelus_dromedarius.KN271192.1                           397866 39 -  15254737 CAGAA-GC-T-G----G---GT--TT-TA-------ACT-A--AATTtg-t-cattat-----aaa--a-t-g
i Camelus_dromedarius.KN271192.1                        C 0 I 8
s Camelus_ferus.KB016973.1                                2973602 39 +   6889770 CAGAA-GC-T-G----G---GT--TT-TA-------ACT-A--AATTtg-t-cattat-----aaa--a-t-g
i Camelus_ferus.KB016973.1                              C 0 I 8
s CanFam4.chr31                                          11520070 39 +  39901454 TGGAA-TC-T-G-------AGT--TT-TA-------ACT-A--GATTTG-T-CGTTAT-----AAA--A-T-G
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   15096 39 +     87036 TGGAA-TC-T-G-------AGT--TT-TA-------ACT-A--GATTTG-T-CGTTAT-----AAA--A-T-G
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11266737 39 -  35597290 TGGAA-TC-T-G-------AGT--TT-TA-------ACT-A--GATTTG-T-cgttat-----aaa--a-t-g
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11089271 39 +  39895921 TGGAA-TC-T-G-------AGT--TT-TA-------ACT-A--GATTTG-T-cgttat-----aaa--a-t-g
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16456286 39 -  44759192 TGGAA-TC-T-G-------AGT--TT-TA-------ACT-A--GATTTG-T-cgttat-----aaa--a-t-g
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21325795 39 + 157394656 AAGAA-GC-C-G----G-AT-T---T-TA-------ACT-G--gattta-t-ctttat-----aaa--a-t-g
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135707023 39 - 157403528 AAGAA-GC-C-G----G-AT-T---T-TA-------ACT-G--Gattta-t-ctttat-----aaa--a-t-g
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          309640 39 +    345090 CAGAA-TC-T-AGGTT---------T-TA-------ACC-A--GATTTG-T-CATTGT-----AAg--a-t-g
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               60326 39 +     67245 CAAAG-AT-T-G----G---GT--TT-TA-------AGT-A--GATTTG-C-CATTAT-----AAA--A-T-G
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 I 13
s Castor_canadensis.CasCan_scaffold_47037                   31724 11 +     33760 -----------------------------------------------------AATAT-----AAG--G-T-G
i Castor_canadensis.CasCan_scaffold_47037               I 7 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   159479 39 -    276539 CAGAA-TC-T-G----G---G--CTT-TA-------ACA-A--GATTTG-T-CATTAC-----AAA--A-T-G
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15787241 39 -  24422027 CTGAT-CC-T-T-------AGT-C-T-TA--A----AC--A--GATTT--GTCAcaat-----gaa--g-t-g
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15799177 39 -  24440124 CTGAT-CC-T-T-------AGT-C-T-TA--A----AC--A--GATTT--GTCacaat-----gaa--g-t-g
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       177368 39 +    436027 CTGAT-CC-T-T-------AGT-C-T-TA--A----AC--A--GATTT--GTCACAAT-----GAA--G-T-G
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18891474 39 -  29618158 CAGAA-TA-T-GGGTT---------C-TG-------ACC-A--GATTTG-C-CATTAT-----AAA--A-T-G
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 9018 39 -     26817 CAGAA-TA-T-GGGTT---------C-TG-------ACC-A--GATTTG-C-CATTAT-----AAA--A-T-G
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                13261 39 +     25043 CAGAA-TA-T-GGGTT---------C-TG-------ACC-A--GATTTG-C-CATTAT-----AAA--A-T-G
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         8664 39 +     21754 CAGAA-TC-T-AGGTT---------T-TA-------ACC-A--GATTTG-T-CATTGT-----AAG--A-T-G
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4364490 39 +   7569818 CAGAA-TC-T-G----G-AT-T---T-TA-------ACT-A--GATTTG-t-cactat-----aaa--a-t-g
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         4247 39 -      9338 CAGAA-TC-T-G----G-AT-T---T-TA-------ACT-A--GATTTG-T-CACTAT-----AAA--A-T-G
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6556254 39 +   6739814 cagaa-tc-t-GGGTT---------T-TA-------ACC-A--GATGTg-c-cattat-----aaa--a-t-g
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      27728 39 +     60454 CAGAA-TC-T-GGGTT---------T-TA-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          2935 39 -     21101 CAGAA-TC-T-GGGTT---------T-TA-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         60245 39 -    107033 CCGAA-TC-T-GGGTT---------T-TA-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        3124 39 -     17608 CAGAA-TC-T-GGGTT---------T-TA-------ACC-A--GATATG-C-CATTAT-----AAA--A-T-G
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                           283 39 +     45019 CAGAA-TC-T-GGGTT---------T-TA-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                            367 39 +     15177 CATAA-TA-T-GTGTT---------T-TA-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          3167 39 +     16677 CAGAA-TC-T-GGGTT---------T-TA-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           25336 39 +     35983 CAGAA-TC-T-GGGTT---------T-TA-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11991865 39 +  12117833 CAGAA-TC-T-GGGTT---------T-TA-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46478622 39 +  46592721 CAGAA-TC-T-GGGTT---------T-TA-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      42177 39 -     45581 CAGAA-TC-T-GGGTT---------T-TA-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       3179 39 +     35577 CAGAA-TC-T-GGGTT---------T-TA-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        2952 39 -     25661 CAGAA-TC-T-GGGTT---------T-TA-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        2932 39 -     17744 CAGAA-TC-T-GGGTT---------T-TA-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        22537 39 +     37128 CAGAA-TC-T-GGGTT---------T-TA-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           3364 39 -      6963 CAGAT-TT-T-G----G---GT--TT-TA-------ACC-A--GATTTG-C-CATTAT-----AAA--A-T-A
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheracebus_lucifer.k141_619653                             6289 39 -     18223 CAGAA-TC-T-AGGTT---------T-TG-------ACC-A--GATTTG-C-CATTAT-----AAA--A-T-G
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             23307 39 +     25473 CAGAA-TC-T-GGGTT---------T-TG-------ACC-A--GATTTG-C-CATTAT-----AAA--A-T-G
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           42347 39 +     57117 CAGAA-TC-T-AGGTT---------T-TG-------ACC-A--GATTTG-C-CATTAT-----AAA--A-T-G
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          47026 39 +     54541 CAGAA-TC-T-AGGTT---------T-TG-------ACT-A--GATTTG-C-CATTAT-----AAA--A-T-G
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15962331 39 +  43084221 CTGAT-CC-T-T-------AGT-C-T-TA--A----AC--A--GATTT--GGCatgat-----aaa--c-t-a
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         71833 39 +    196370 CAGAA-TC-T-GGGTT---------T-TG-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          16013 39 +     40510 CAGAA-TC-T-GGGTT---------T-TG-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15140534 39 -  15256731 CAGAA-TC-T-GGGTT---------T-TA-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      35143 39 -     53260 CAGAA-TC-T-GGGTT---------T-TA-------ACC-A--GATGTG-C-CAGTAT-----AAA--A-T-G
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101145702 39 + 101219884 cagaa-tc-T-GGGTT---------T-TA-------ACC-A--GATGTg-c-cattat-----aaa--a-t-g
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                17064 39 -     21363 CAGAA-TC-T-G----G---GT--TT-TA-------ACC-A--GAT-TG-T-CATTAT-----AAA--A-CCA
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           762369 39 +    964067 CAGAA-TC-T-G----G---GT--TT-TA-------ACC-A--GAT-TG-T-CATTAT-----Aaa--a-cca
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10887437 33 +  10971483 -------c-t-gcctt---------t-TC-------AAT-A--TATATG-T-AAGTGG-----CAG--G-T-G
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147665623 39 + 156195979 cAGAA-TC-T-GGGTT---------T-TA-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            17606 39 +     23629 cAGAA-TC-T-GGGTT---------T-TA-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60614198 36 +  78930452 GACAA-AC-TNG----GT-T-----T-AA-------ATC-a--gattta-t-caataa-----aaa-------
i Condylura_cristata.JH655880.1                         C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 279153 30 -    399297 ------tc-t-t---------ggttg-ta-------ac--t---ctgg--c-tatcct-----gga--a-c--
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 I 147
s Cricetulus_griseus.LT883672.1                          53029825 23 +  72327488 -------------------------T-TA-------GT--C---ATAT--T-TATcat-----aga--a-t-g
i Cricetulus_griseus.LT883672.1                         I 13 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            52628 32 -     70449 CAGAA-TC-T-G------C-GT--TT-TA-------ACT-A--GATTTT-T-CATTA----------------
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 I 7
s Ctenodactylus_gundi.CteGun_scaffold_447                  209031 35 -    956709 -GGAA-TC-T-T----GT-T-----A-AA-------AC--A--GATTT--T-GTCACT-----TAA--A-T-G
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 31676 39 -     67205 CCAAA-CC-T-T-------AGT--TT-TT--A----AT--A--GATTT--GTCATTAT-----AAA--A-T-G
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                18370 39 +     26546 CTAAT-CC-T-T-------AGT-C-T-TA--A----AC--A--GATTT--GTCATTAT-----AAA--A-T-G
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             59461 39 -    236241 CTGAT-CC-T-T-------AGT-C-A-TA--A----AC--A--GATTT--GTCATTAT-----AAA--A-T-G
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          184239 39 -   6883506 CAGTA-TT-T-G----G---GT--TT-TA-------AAC-A--GATTTG-T-CAttat-----aaa--a-t-a
i Dasypus_novemcinctus.JH568778.1                       C 0 I 15
s Delphinapterus_leucas.KZ290064.1                       80037418 44 -  96802777 CAGAA-GT-T-G------C---ATTT-TA-------ACT-A--GATTTG-T-CATTATatgacaaa--a-t-g
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18699611 39 -  18957592 CAGAG-TC-T-G----G---GT--TT-TA-------ATT-A--GATTTG-C-CACTac-----aaa--a-t-g
i Desmodus_rotundus.KZ672188.1                          C 0 I 13
s Dicerorhinus_sumatrensis.PEKH010003161.1                 323142 39 +    993696 CAGAA-TC-T-G----G-AT-T---T-TA-------ACC-A--GATTTG-T-cactat-----aaa--a-t-g
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   3794 39 +    151128 CAGAA-TC-T-G----G-AT-T---T-TA-------ACC-A--GATTTG-T-CACTAT-----AAA--A-T-G
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   157598 39 +    228994 CTGAT-CC-T-T-------AGT-C-T-TT--A----AA--A--GATTC--GGCATTAT-----AAA--A-C-G
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3656967 39 +   4240102 CAGAA-TC-T-G----AT-T-T---T-TA-------AC-TA--GATTT-AT-CAGGAT-----AAA--A-T-G
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 28610 39 +     28912 CAGAA-TC-T-G----AT-T-T---T-TA-------AC-TA--GATTT-AT-CAGGAT-----AAA--A-T-G
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                36687 39 -     73477 CTGAT-TC-T-T-------AGT-C-T-TA--A----AC--A--GATTT--GTCATGAT-----GAA--G-C-G
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22999536 39 -  44670279 CAAAT--C-TNA----G---GT--TT-GA-------ACT-T--TATTTA-T-CACTAT-----AAA--T-T-G
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 12858 36 +     24177 cAGAA-TC-T-G-------AG-GC-T-TA-------ACT-A--ATTTtg-c-cattat-----aaa-------
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1492060 39 +   1727528 CAGAA-GC-T-G----G-AT-T---T-TA-------ACT-g--gattta-t-cattat-----aaa--a-t-g
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Enhydra_lutris.KZ291749.1                              85872803 39 +  99434291 TGGAA-TC-C-G-------AGT--TT-TA-------ACT-A--GATTtg-t-gtttat-----aaa--a-t-g
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4707549 38 +   6522550 CAGAG-TC-T-G----G---GT---T-TA-------ACT-A--CATTTG-c-cattat-----aaa--a-t-g
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5853582 39 -   7175178 CAGAA-TC-T-G----G-AT-T---T-TA-------ACC-A--GATTTG-T-cagtat-----aaa--a-t-g
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13352087 39 +  41866177 CAGAA-TC-T-G----G-AT-T---T-TA-------ACC-A--GATTTG-T-cagtat-----aaa--a-t-g
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          13576 39 +     92910 CAGAA-TC-T-G----G-AT-T---T-TA-------ACC-A--GATTTG-T-cagtat-----aaa--a-t-g
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11534859 25 +  16010500 TATGG-TT-G-G----G---G-A-TT-TA-------ATC-A--CAATT-------------------------
i Erinaceus_europaeus.JH835290.1                        C 0 I 11
s Erythrocebus_patas.Contig8                             48777713 39 -  48907691 CAGAA-TC-T-GGGTT---------T-TA-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          315634 44 +    330699 CAGAA-GT-T-G----G---GT--TT-TA-------ACT-A--GATTTG-T-CATTATATGACAAA--A-T-G
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             62087 44 +     89355 CAGAA-GT-T-G----G---GT--TT-TA-------ACT-A--GATTTA-T-CATTATATGACAAA--A-T-G
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Felis_catus.CM001386.2                                129893578 39 - 159252932 CAGAA-TA-T-G-------AGT--TT-TA-------ACT-A--GATTTG-T-cgttat-----aaa--a-t-g
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129280662 39 - 158578461 CAGAA-TA-T-G-------AGT--TT-TA-------ACT-A--GATTTG-T-cgttat-----aaa--a-t-g
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 21802 39 +     52776 CAGAA-TA-T-G-------AGT--TT-TA-------ACT-A--GATTTG-T-CATTAT-----AAA--A-T-G
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13892091 26 -  19261668 -------------------------T-TA---C---AA--a--gtttt--aaatcaat-----aaa--a-t-a
i Fukomys_damarensis.KN123630.1                         I 308 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               156907 40 +    324696 TGAAA-TC-T-G----G---GT--TT-TA-------ACT-A--GATTTG-T-CATGAT-----AAA--AAT-G
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 I 12
s Giraffa_tippelskirchi.LVKQ01S012154.1                    181865 12 -    189561 ----------------------------------------------------cattat-----aaa--a-t-g
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           14364 37 -     18683 TAGAA-TC-T-G----G---GT--TT-TA-------AC--A--AATTT--T-CCTTGT-----AAA--A-T-G
i Glis_glis.GliGli_scaffold_79770                       C 0 I 9
s Gorilla_beringei.k141_111300                               6286 39 -     14630 CAGAA-TC-T-GGGTT---------T-TA-------ACC-A--GATTTG-C-CATTAT-----AAA--A-T-G
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119653386 39 - 195582420 caGAA-TC-T-GGGTT---------T-TA-------ACC-A--GATTTg-c-cattat-----aaa--a-t-g
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              17826 32 +     53719 CAGAA-TC-T-G-------AGT--TT-TA-------ACT-A--GATTTG-T-CATTA----------------
i Helogale_parvula.HelPar_flattened_line_22962          C 0 I 7
s Hemitragus_hylocrius.HemHyl_scaffold_16669                28080 37 -     91191 AAGAA-GC-T-G----G-AT-T---T-TA-------ACT-G--GATTTA-T-CTTTAT-----AAA--A----
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 I 2
s Heterocephalus_glaber.JH602058.1                        2551694 37 +  31725842 CAAAT-CC-T-A----GT-T-T---T-TA--A----AC--A--GATTT--gtcattat-----aaa--a----
i Heterocephalus_glaber.JH602058.1                      C 0 I 6
s Hippopotamus_amphibius.HipAmp_scaffold_1308              147723 39 +    277961 CAGAA-GC-G-G----G---GT--TT-TA-------ACC-A--GATTTG-T-CATTGT-----GAA--A-T-G
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      279004 36 -    477199 cAGAA-TA-T-G----G--GGT---T-TA-------ATT-A--GATTTg-c-cattat-----aaa-------
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_345408                 5 36 -       919 CAGAA-TA-T-G----G--GGT---T-TA-------ACT-A--GATTTG-C-CATTAT-----AAA-------
i Hipposideros_galeritus.HipGal_scaffold_345408         n 325 C 0
s Hoolock_leuconedys.ctg79                                      5979 39 -   7690867 CAGAA-TC-T-AGGTT---------T-TA-------ACC-A--GATTTG-C-CATTAT-----AAG--A-T-G
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 17902 32 -     67322 CAGAA-TC-T-G-------AGT--TT-TA-------ACT-A--CATTTG-T-CATTA----------------
i Hyaena_hyaena.HyaHya_flattened_line_20729             I 9 I 7
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19596 39 -    119109 CTGAT-CC-T-T-------AGT-C-T-TA--A----AC--A--GATTT--GTCATGAT-----AAA--G-T-G
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 I 3
s Hylobates_abbotti.k141_164775                               762 39 -      2073 CAGAA-TC-T-AGGTT---------T-TA-------ACC-A--GATTTG-C-CATTAT-----AAG--A-T-G
i Hylobates_abbotti.k141_164775                         C 0 C 0
s Hylobates_agilis.k141_1878600                              1015 39 -      1230 CAGAA-TC-T-AGGTT---------T-TA-------ACC-A--GATTTG-C-CATTAT-----AAG--A-T-G
i Hylobates_agilis.k141_1878600                         I 122 n 78
s Hylobates_klossii.k141_183401                               315 39 -      1272 CAGAA-TC-T-AGGTT---------T-TA-------ACC-A--GATTTG-C-CATTAT-----AAG--A-T-G
i Hylobates_klossii.k141_183401                         I 122 I 179
s Hylobates_pileatus_b.ContigUN                                 14625668 39 -  25970782 CAGAA-TC-T-AGGTT---------T-TA-------ACC-A--GATTTG-C-CATTAT-----AAG--A-T-G
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1389047                            2924 39 -      2977 CAGAA-TC-T-AGGTT---------T-TA-------ACC-A--GATTTG-C-CATTAT-----AAG--A-T-G
i Hylobates_muelleri.k141_1389047                       I 122 n 39
s Hylobates_pileatus_a.tarseq_592                             34828 39 -     60944 CAGAA-TC-T-AGGTT---------T-TA-------ACC-A--GATTTG-C-CATTAT-----AAG--A-T-G
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     6758 25 +     22540 CAGTT-CC-T-T----G---GT--TT-TA--A----AC--C--GATTT-------------------------
i Hystrix_cristata.HysCri_scaffold_50788                C 0 I 13
s Ictidomys_tridecemlineatus.JH393315.1                   7126454 39 +  13083262 TAGAA-TC-T-G-----ACT-T---T-TA-------GC--TAGACTTG--T-cattac-----aaa--a-t-g
i Ictidomys_tridecemlineatus.JH393315.1                 I 5 I 1
s Inia_geoffrensis.IniGeo_flattened_line_66725               9623 44 +     17520 CAGAA-GT-T-G------C---ATTT-TA-------ACT-A--GATTTG-T-CATTATATGACAAA--A-T-G
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8566539 36 +  11848649 CAGTA-CC-T-G-----AAT-T---T-TA-------AC--C---AGAT--T-TGTCAT-----GGA--A-T-G
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               24230 44 +     37189 CAGAA-GT-T-G----G---GT-C-T-TA-------ACT-A--GATCTG-T-CATTATATGACAAA--A-T-G
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          50864 39 -    147782 CAGAA-TC-T-GGGTT---------T-TG-------ACC-A--GATTTG-C-CATTAT-----AAA--A-A-G
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    4384  8 +     26176 CAGAG-TC-T---------------------------------------------------------------
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 I 78
s Leptonychotes_weddellii.KB714749.1                      3086589 39 -   3498232 CAGAA-TC-C-G-------AGT--TT-TA-------ACT-A--GATCTG-T-CATtat-----caa--a-t-g
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    13880 39 +     22452 CAGAA-TC-T-G-------AGT--TT-TA-------ACC-A--AATTTG-T-TATTAT-----AAA--A-T-G
i Lepus_americanus.LepAme_scaffold_62849                C 0 I 3
s Lipotes_vexillifer.KE558548.1                            136580 44 +   3060487 CAGAA-GT-T-G------C---ATTT-TA-------ACT-A--GATTTG-T-CATTATatgacaaa--a-t-g
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19249331 39 +  19376315 CAGAA-TC-T-GGGTT---------T-TA-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loxodonta_africana.GL010040.1                          20595417 38 -  62548349 CAAAA--C-T-G----G-AT-T---T-TA-------GCC-A--GACTTA-G-GGCCAT-----AAG--t-t-g
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11088727 39 +  39895028 TGGAA-TC-T-G-------AGT--TT-TA-------ACT-A--GATTTG-T-cgttat-----aaa--a-t-g
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             21089 39 +     74745 CAGAA-CC-T-GGGTT---------T-TA-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12707549 39 +  12821369 CAGAA-CC-T-GGGTT---------T-TA-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                 126 39 -     26467 CAGAA-CC-T-GGGTT---------T-TA-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           47995 39 +     63263 CAGAA-CC-T-GGGTT---------T-TA-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                  105 39 -     26361 CAGAA-CC-T-GGGTT---------T-TA-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 3280 39 -      7381 CAGAA-CC-T-GGGTT---------T-TA-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  46518 39 -     79256 CAGAA-CC-T-GGGTT---------T-TA-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Macaca_maura.k141_251854                              I 5 C 0
s Macaca_mulatta.NC_041755.1                            196036620 39 + 196197964 cagaa-cC-T-GGGTT---------T-TA-------ACC-A--GATGTg-c-cattat-----aaa--a-t-g
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11446786 39 +  11645122 caGAA-CC-T-GGGTT---------T-TA-------ACC-A--GATGTg-c-cattat-----aaa--a-t-g
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   5472 39 -     46448 CAGAA-CC-T-GGGTT---------T-TA-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Macaca_nigra.k141_282495                              I 5 C 0
s Macaca_radiata.k141_3680256                                3139 39 -     13212 CAGAA-CC-T-GGGTT---------T-TA-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 16815 39 -     55006 CAGAA-CC-T-GGGTT---------T-TA-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43841921 39 +  43892939 CAGAA-CC-T-GGGTT---------T-TA-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               18102 39 -     24607 CAGAA-CC-T-GGGTT---------T-TA-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               5469 39 -     27140 CAGAA-CC-T-GGGTT---------T-TA-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Macaca_tonkeana.k141_2870633                          I 5 C 0
s Mandrillus_leucophaeus.scaffold125                     43438503 39 -  43563597 CAGAA-TC-T-GGGTT---------T-TA-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4451317 39 -   4543643 CAGAA-TC-T-GGGTT---------T-TA-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            146673 38 +    252755 cagaa-tt-t-t---------cattt-t--------act-a--gatttg-t-cattat-----gaa--a-t-g
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             36816 37 +     58827 CAGAA-TC-T-T------C---A-TT-T--------ACT-A--GATTTG-t-cattat-----gaa--a-t-g
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36874273 39 +  64221397 CAGAA-TC-T-G----G-CT-T---T-TA-------GC--TAGACTGg--t-cattat-----aaa--a-t-g
i Marmota_marmota.CZRN01000005.1                        I 5 I 1
s Mellivora_capensis.MelCap_flattened_line_15433             1615 39 -     87323 TGGTA-TC-T-G-------AGT--TT-TA-------ACT-A--GATTTG-T-GTTTAT-----AAA--A-T-G
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               13801 34 +     15977 ---------G-A----GTCTGTACTT-TA-------AC--C---ATGT--T-TGTCAA-----AGA--A-T-G
i Meriones_unguiculatus.MerUng_scaffold_52233           I 2 C 0
s Mesocricetus_auratus.KB708139.1                         1047507 23 -  26018355 -------------------------T-TA-------AT--C---ATAT--T-TATCAT-----GGA--A-T-G
i Mesocricetus_auratus.KB708139.1                       I 8 C 0
s Mesoplodon_bidens.MesBid_scaffold_227248                    907 44 -      1377 CAGAA-GT-T-G------C---ATTT-TA-------ACT-A--GATTTG-T-CATTATATGACAAA--A-T-G
i Mesoplodon_bidens.MesBid_scaffold_227248              C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  35528 29 -     48017 AAAAT--C-TNA----G---GT--GT-GCGTACACAGCG-T--TC----------------------------
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               23515 39 -     32043 CAGAG-TC-T-G----G---GT--TT-TA-------ACT-A--GATTTG-C-CATTAC-----AAA--A-T-G
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 I 13
s Miniopterus_natalensis.LDJU01000022.1                   8210688 37 +  10048721 CAG---TC-T-G----G---GT--TT-TA-------ATG-A--CATTtg-c-tattat-----aaa--a-t-g
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            35177 37 +     45743 CCG---TC-T-G----G---GT--TT-TA-------ATG-A--CATTTG-C-TATTAT-----AAA--A-T-G
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         3064 39 +     29742 CAGAA-TC-T-GGGTT---------T-TA-------ACC-A--GATGGG-C-CATTAT-----AAA--A-T-G
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        12105 39 -    104932 CAGAA-TC-C-G-------AGT--TT-TA-------ACT-A--GATCTG-T-CATTAT-----CAA--A-T-G
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 147008 44 +    154973 CAGAA-GT-T-G------C---ATTT-TA-------ACT-A--GATTTG-T-CATTATATGACAAA--A-T-G
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                162039 37 +    265003 CA--G-CC-T-A----G---GT--TT-TA-------ACT-A--GATTTG-C-CATTTT-----AAA--A-T-G
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 I 13
s Moschus_moschiferus.MosMos_scaffold_78805                  2095 39 -     19904 AAGAA-GC-T-G----G-AT-T---T-TA-------ACT-G--GATTTA-T-CATTAT-----AAA--A-T-G
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  145521 32 -    168139 CAGAA-TC-T-G-----AAT-T---T-TA-------ACT-A--GATTTG-T-CATTA----------------
i Mungos_mungo.MunMun_flattened_line_8729               C 0 I 7
s Murina_feae.MurFea_scaffold_2254                          22038 39 -    100666 CAGAG-TC-T-G----G---GT---TTTA-------GCT-A--CATTTG-C-CATTAT-----AAA--A-T-G
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70767338  2 +  92629107 ga-----------------------------------------------------------------------
i Mus_caroli.LT608236.1                                 C 0 I 259
s Mus_musculus.chr16                                     75490415  2 +  98207768 ga-----------------------------------------------------------------------
i Mus_musculus.chr16                                    C 0 I 259
s Mus_pahari.LT608305.1                                  67556618  2 +  89017189 ga-----------------------------------------------------------------------
i Mus_pahari.LT608305.1                                 C 0 I 256
s Mus_spretus.CM004110.1                                 74333150  2 +  97876770 ga-----------------------------------------------------------------------
i Mus_spretus.CM004110.1                                C 0 I 260
s Muscardinus_avellanarius.MusAve_scaffold_9643             12869 38 +     98495 TAGAA-TC-T-G----G-AT-T--TT-TA-------AC--A--ATTTG--T-CACTGT-----AAA--G-T-G
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 I 3
s Mustela_putorius.JH417978.1                             4424983 39 -  28371801 CAGAA-TC-C-G-------AGT--TT-TA-------ACT-A--GAtttg-t-gtttat-----aaa--a-t-g
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     91001 39 -    117718 CCAAT-CC-T-T-------AGT-C-T-TA--A----AC--A--GATTT--GTCATTAT-----AAA--A-T-G
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               969656 38 +   8389877 CAGAG-TC-T-G----G---GT---T-TA-------GCT-A--CATTTG-c-cattat-----aaa--a-t-g
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5021080 38 +   6462685 CAGAG-TC-T-G----G---GT---T-TA-------GCT-A--CATTtg-c-tattat-----aaa--a-t-g
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3467158 38 -   3747815 CAGAG-TC-T-G----G---GT---T-TA-------GCT-A--CATTTG-C-cattat-----aaa--a-t-g
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        12401 38 +     66751 CAGAG-TC-T-G----G---GT---T-TA-------GCT-A--CATTTG-C-CATTAT-----AAA--A-T-G
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             5628 40 -      8794 CAGAA-TC-T-G----G---GT--TT-TA--A----ATC-A--GATTTG-T-CATTAT-----AAA--A-T-A
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nasalis_larvatus.k141_153429                               9543 39 +     48152 CAGAA-TC-T-GGGTT---------T-TA-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4485495 39 -  14209539 CAGAA-TC-C-G-------AGT--TT-TA-------ACT-A--GATCTG-T-CATtat-----caa--a-t-g
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3951620 44 -   4490290 CAGAA-GT-T-G------C---ATTT-TA-------ACT-A--GATTTG-T-CATTATatgacaaa--a-t-g
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Nomascus_annamensis.k141_720788                             922 39 -      1065 CAGAA-TC-T-AGGTT---------T-TA-------ACC-A--GATTTG-C-CATTAT-----AAG--A-T-G
i Nomascus_annamensis.k141_720788                       I 122 n 162
s Nomascus_concolor.k141_226614                              2230 39 -      5092 CAGAA-TC-T-AGGTT---------T-TA-------ACC-A--GATTTG-C-CATTAT-----AAG--A-T-G
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_1004198                            793 39 +      1448 CAGAA-TC-T-AGGTT---------T-TA-------ACC-A--GATTTG-C-CATTAT-----AAG--A-T-G
i Nomascus_gabriellae.k141_1004198                      C 0 C 0
s Nomascus_siki_a.k141_595747                                  3652 39 +      4512 CAGAA-TC-T-AGGTT---------T-TA-------ACC-A--GATTTG-C-CATTAT-----AAG--A-T-G
i Nomascus_siki_a.k141_595747                             I 122 I 39
s Nyctereutes_procyonoides.CAJHUB010000786.1                31528 39 +   3668941 TGGAA-TC-T-G-------AGT--TT-TA-------ACT-A--GATTTG-T-cgttat-----aaa--a-t-g
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Ochotona_princeps.JH802095.1                            4996634 40 -  23139505 CATAA-TC-T-T-------AGT--TT-TA-------ACC-G--AAgtta-t-tatata-----aaa--a-ttt
i Ochotona_princeps.JH802095.1                          C 0 I 3
s Octodon_degus.JH651621.1                                3686495 39 +  10294119 CTGAT-CC-T-T-------AGT--TT-TA--A----AC--G--TATTT--Gtcattat-----aaa--a-t-g
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             680162 39 -   3126709 CAGAA-TC-C-A-------AGT--TT-TA-------ACT-A--GATTTG-T-CATtat-----caa--a-t-g
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1080275 39 +   1425656 CAGAA-GC-T-G----G-AT-T---T-TA-------ACT-G--GATTTA-T-Cgttat-----aaa--g-t-g
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         37593 12 +     78940 ----------------------------------------------------cattat-----aaa--a-t-g
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  37696 23 +     62360 -------------------------T-TA-------AT--C---Atat--t-tatcat-----ata--a-t-t
i Onychomys_torridus.OnyTor_scaffold_12578              I 6 C 0
s Orcinus_orca.KB316965.1                                 7225305 44 -   7562323 CAGAA-GT-T-G------C---ATTT-TA-------ACT-A--GATTTG-T-CATTATatgacaaa--a-t-g
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              60549 39 -     66828 CAAAA--CCT-G-----T--GT--TT-TA-------AGT-G--GATTTA-T-CATTGT-----AAG--T-T-G
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141876917 39 + 163896628 CAGAA-TC-T-G-------AGT--TT-TA-------ACC-G--AATttg-t-tattat-----aaa--a-t-g
i Oryctolagus_cuniculus.CM000803.1                      C 0 I 3
s Otocyon_megalotis.JAEUCK010005121.1                      308812 39 -    505867 TGGAA-TC-T-G-------AGT--TT-TA-------ACT-A--GACTTG-T-CATTAT-----AAA--A-T-G
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Ovis_aries.CM001582.2                                 134077871 39 - 275406953 AAGAA-GC-T-G----G-AT-T---T-TA-------ACT-G--gattta-t-ctttat-----aaa--a-t-g
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      79086 39 +    140051 AAGAA-GC-T-G----G-AT-T---T-TA-------ACT-G--GATTTA-T-CTTTAT-----AAA--A-T-G
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127575652 39 - 205426864 caGAA-TC-T-GGGTT---------T-TA-------ACC-A--GATTTg-c-cattat-----aaa--a-t-g
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120152806 39 - 196562556 caGAA-TC-T-GGGTT---------T-TA-------ACC-A--GATTTG-c-cattat-----aaa--a-t-g
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  34945 39 +    295523 CAGAA-TA-T-G-------AGT--TT-TA-------ACT-A--GATTTG-T-CATTAT-----AAA--A-T-G
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3638695 39 +  18214204 CAGAA-TA-T-G-------AGT-C-T-TA-------ACT-A--GATTtg-t-cattat-----aaa--a-t-g
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5028371 39 -   6340057 CAGAA-TA-T-G-------AGT--TT-TA-------ACT-A--GATTtg-t-cattat-----aaa--a-t-g
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1066721 39 -   1292953 AAGAA-GC-T-G----G-AT-T---T-TA-------ACT-G--gattta-t-ctttat-----aaa--a-t-g
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188157301 39 - 188283584 cagaa-tc-T-GGGTT---------T-TA-------ACC-A--GATGTg-c-cattat-----aaa--a-t-g
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                               393 39 +     25005 CAGAA-TC-T-GGGTT---------T-TA-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47514678 39 +  47705337 cAGAA-TC-T-GGGTT---------T-TA-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 68664 39 -    104429 CAGAA-TC-T-GGGTT---------T-TA-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    7197 39 +     14967 CAGAA-TC-T-GGGTT---------T-TA-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 3058 39 -      7628 CAGAA-TC-T-GGGTT---------T-TA-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    116408 32 -    135482 CAGAG-TC-T-G-------AGT--TT-TA-------ACT-A--GATTTG-T-CATGA----------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 I 2
s Perognathus_longimembris.PerPac_flattened_line_19359        646 39 +     49596 CAGAA-TC-T-G----AT-T-T---T-TA-------AC-TA--GATTT-AT-CCTTAT-----AAA--A-T-G
i Perognathus_longimembris.PerPac_flattened_line_19359  I 5 C 0
s Peromyscus_maniculatus.KI615518.1                       4950937 33 -   8017169 CA---GTC-T-T-----T----ACTT-TA-------AT--C---ATAT--T-T-TCAT-----AGA--A-T-G
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    14226 39 -     36578 CAAAT-GT-T-T----G---GT--TT-AA--A----AG--A--GAATT--GTCATTAT-----AAA--A-T-G
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            121909 44 -    122454 CAGAA-GT-T-G------C---ATTT-TA-------ACT-A--GATTTG-T-CATTATACGACAAA--A-T-G
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1987485                           3072 39 -      5908 caGAA-TC-T-GGGTT---------T-TA-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       3690 39 -     17985 CAGAA-TC-T-GGGTT---------T-TA-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            3057 39 +      7694 CAGAA-TC-T-GGGTT---------T-TA-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26741541 39 +  26888534 cagaa-tc-T-GGGTT---------T-TA-------ACC-A--GATGTG-c-cattat-----aaa--a-t-g
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pithecia_albicans.k141_991845                             44470 39 -     61926 CAGAA-TC-T-GGGTT---------T-TG-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        25855 39 +     78826 CAGAA-TC-T-GGGTT---------T-TG-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              9902 39 -     15800 CAGAA-TC-T-GGGTT---------T-TG-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        13101 39 -     16101 CAGAA-TC-T-GGGTT---------T-TG-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          6329 39 +      9673 CAGAA-TC-T-GGGTT---------T-TG-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13475329 39 -  19735023 CAGAA-TC-T-GGGTT---------T-TG-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           14232 39 -     31692 CAGAA-TC-T-GGGTT---------T-TG-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           5996 44 +     21690 CAGAA-GT-T-G----G---GT--TT-TA-------ACT-A--GATTTG-T-CATTATATGACAAA--A-T-G
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       23572 39 +     44506 CAGAA-TC-T-GGGTT---------T-TG-------ACC-A--GATTTG-T-CACTAT-----AAA--A-T-G
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        23784 39 +     67491 CAGAA-TC-T-GGGTT---------T-TG-------ACC-A--GATTTG-T-CACTAT-----AAA--A-T-G
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      14024 39 -     98129 CAGAA-TC-T-GGGTT---------T-TG-------ACC-A--GATTTG-T-CACTAT-----AAA--A-T-G
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     23624 39 +    147771 CAGAA-TC-T-GGGTT---------T-TG-------ACC-A--GATTTG-T-CACTAT-----AAA--A-T-G
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                          260 39 -     43940 CAGAA-TC-T-GGGTT---------T-TG-------ACC-A--GATTTG-T-CACTAT-----AAA--A-T-G
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          4343 39 -     55515 CAGAA-TC-T-GGGTT---------T-TG-------ACC-A--GATTTG-T-CACTAT-----AAA--A-T-G
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         23697 39 +    152463 CAGAA-TC-T-GGGTT---------T-TG-------ACC-A--GATTTG-T-CACTAT-----AAA--A-T-G
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       1414 39 -    119457 CAGAA-TC-T-GGGTT---------T-TG-------ACC-A--GATTTG-T-CACTAT-----AAA--A-T-G
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         13420 39 +    134592 CAGAA-TC-T-GGGTT---------T-TG-------ACC-A--GATTTG-T-CACTAT-----AAA--A-T-G
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          24007 39 -     75465 CAGAA-TC-T-GGGTT---------T-TG-------ATC-A--GATTTG-T-CACTAT-----AAA--A-T-G
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              188172 39 -    373494 CAGAA-TC-T-GGGTT---------T-TA-------ACt-a--gatttg-c-catttt-----aaa--a-t-g
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19808820 39 +  19899266 CAGAA-TC-T-GGGTT---------T-TA-------ACT-A--GATTTG-C-CATTTT-----AAA--A-T-G
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               6822 39 -     15069 CAGAA-TC-T-GGATT---------T-TA-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              6937 39 +     14865 CAGAA-TC-T-GGATT---------T-TA-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Psammomys_obesus.NESX01026517.1                           36083 34 +     77221 ---------G-A----GTCTGTACTT-TA-------AC--C---ATGT--T-TGtcac-----aga--a-t-g
i Psammomys_obesus.NESX01026517.1                       I 2 C 0
s Pteronotus_parnellii.KE867983.1                            4678 39 -     27784 CAGAG-TC-T-T----G---GT--TT-TA-------ACT-A--GATTTG-C-Cattat-----aaa--a-g-g
i Pteronotus_parnellii.KE867983.1                       C 0 I 13
s Pteronura_brasiliensis.PteBra_flattened_line_1343        247294 39 -    344369 CAGAA-TC-T-G-------AGT--TT-TA-------ACT-A--GATTTG-T-GTTTAT-----AAA--A-T-G
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13246590 36 -  17261082 CAAAA-TC-T-G------AGGT---T-TA-------ACT-A--ATTTtg-c-cattat-----aaa-------
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             604541 36 -   3946241 CAAAA-TC-T-G------AGGT---T-TA-------ACT-A--ATTTTG-c-cattac-----aaa-------
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131534966 39 - 161321710 CAGAA-TA-C-G-------AGT--TT-TA-------ACT-A--GATTTG-T-cgttat-----aaa--a-t-g
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             30925 39 +     56732 CAGAA-TC-T-GGGTT---------T-TA-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6807419 39 +   6970761 CAGAA-TC-T-GGGTT---------T-TA-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             6812 39 +     18040 CAGAA-TC-T-GGGTT---------T-TA-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                16389 39 +     68503 CAGAA-GC-T-G----G-AT-T---T-TA-------ACT-G--GATTTA-T-CGTTAT-----AAA--A-T-G
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1788458 36 +   2252614 cAGAA-CA-T-G----G--GGT---T-TA-------ACT-a--gatttt-c-cattat-----aaa-------
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                            1209 39 -     17045 CAGAA-TC-T-GGGTT---------T-TA-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206378697 39 - 206558726 cagaa-tc-T-GGGTT---------T-TA-------ACC-A--GATGTG-c-cattat-----aaa--a-t-g
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44857599 39 -  45163003 CAGAA-TC-T-GGGTT---------T-TA-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                19923 36 +    109198 CAGAA-TC-T-G------AGGT---T-TA-------ACT-A--ATTTTG-C-CGTTAT-----AAA-------
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       8546 39 +     12214 AAGAA-GC-T-G----G-AT-T---T-TA-------ACT-G--GATTTA-T-CATTAT-----AAA--A-T-G
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15673429 39 -  43202129 CAGAA-TC-T-GGGTT---------T-TG-------ACC-A--GATTTG-c-tgttat-----aaa--a-t-g
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        5342 39 +     34089 CAGAA-TC-T-GGGTT---------T-TG-------ACC-A--GATTTG-T-TGTTAT-----AAA--A-T-G
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              5284 39 -     60842 CAGAA-TC-T-GGGTT---------T-TG-------ACC-A--GATTTG-C-TGTTAT-----AAA--A-T-G
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              5377 39 +     67014 CAGAA-TC-T-GGGTT---------T-TG-------ACC-A--GATTTG-T-TGTTAT-----AAA--A-T-G
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              5355 39 +     60816 CAGAA-TC-T-GGGTT---------T-TG-------ACC-A--GATTTG-C-TGTTAT-----AAA--A-T-G
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 5292 39 -     76454 CAGAA-TC-T-GGGTT---------T-TG-------ACC-A--GATTTG-C-TGTTAT-----AAA--A-T-G
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17342019 39 -  30362882 CAGAA-TC-T-GGGTT---------C-TG-------ACC-A--GATTTG-C-CATTAT-----AAA--A-T-G
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         21380 39 -     62485 CAGAA-TC-T-GGGTT---------C-TG-------ACC-A--GATTTG-C-CATTAT-----AAA--A-T-G
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   32880 41 -    114521 CACAA-AC-TNG----GT-T-----T-AA-------ACC-A--GATTTA-T-CATTAA-----AAAAAA-A-A
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        4429 39 +     15331 CAGAA-TC-T-GGGTT---------T-TA-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       9804 39 +     20762 CAGAA-TC-T-GGGTT---------T-TA-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         119810 39 +    130994 CAGAA-TC-T-GGGTT---------T-TA-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           38588 39 +     46263 CAGAA-TC-T-GGGTT---------T-TA-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     31733 39 +     42640 CAGAA-TC-T-GGGTT---------T-TA-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        14755 39 +     30600 CAGAA-TC-T-GGGTT---------T-TA-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  100871 33 -    120886 -A---GTC-C-T-----T----ACTT-TA-------AT--C---ATAT--T-TGTTAT-----AGG--A-T-G
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            19496 26 +    739146 -------------------------T-TA-------ACC-A--CATTTA-T-CATTAT-----CAA--A-T-G
i Solenodon_paradoxus.SolPar_flattened_line_1012        I 11 C 0
s Sorex_araneus.JH798170.1                               17767061 39 -  27805282 TAGAA-GC-T-G-------AGT--TT-TA-------ACA-A--TATTCA-T-Agtaat-----aga--a-t-t
i Sorex_araneus.JH798170.1                              C 0 I 6
s Spermophilus_dauricus.KZ294190.1                        2240370 39 +   2842873 TAGAA-TC-T-G-----ACT-T---T-TA-------GC--TAGACttg--t-cattat-----aaa--a-t-a
i Spermophilus_dauricus.KZ294190.1                      I 5 I 1
s Spilogale_gracilis.SpiGra_flattened_line_905             235418 39 -    276980 CAGAA-TC-T-G-------AGT--TT-TA-------ACT-A--GATTTG-T-CATTAT-----AAA--A-T-G
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            28181 32 +     62062 CAGAA-TC-T-G-------AGT--TT-TA-------ACT-A--GATTCG-T-CATTA----------------
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 I 7
s Sus_scrofa.CM000824.4                                 189272699 39 + 218635234 CAGAA-GC-T-G----G---G--CTT-TA-------ACC-A--GATTTG-t-cattat-----aaa--a-t-g
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        15929 39 -  13920577 CAGAA-TC-T-AGGTT---------T-TA-------ACC-A--GATTTG-C-CATTAT-----AAG--A-T-G
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                 878 39 +     20549 CAGAA-TC-T-G----G---GT--TT-TA-------ACT-A--CATTTT-C-TATTAT-----AAA--A-T-G
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               15294 40 +     45698 CAGAA-TC-T-G----G-AT-T---T-TA--A----ATC-A--GATTTG-T-CATTAT-----AAA--A-T-A
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      807728 39 +   1148477 CAGAA-TC-T-G----G-AT-T---T-TA-------ACC-A--GATTTG-T-CATTAT-----AAA--A-T-G
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  58440 39 +     99546 CAGAA-TC-T-G----G-AT-T---T-TA-------ACC-A--GATTTG-T-CATTAT-----AAA--A-T-G
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               27092 39 +     42269 CAGAA-TC-T-AGGTT---------T-TA-------ACC-A--GATTTG-T-CATTGT-----AAG--A-T-G
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               60408 39 +     65473 CAGAA-TC-T-AGGTT---------T-TA-------ACC-A--GATTTG-T-CATTGT-----AAG--A-T-G
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194008829 39 - 194193292 cagaa-tc-t-GGGTT---------T-TA-------ACC-A--GATGTg-c-cattat-----aaa--a-t-g
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             39436 39 -     47444 CAAAT-GC-T-T----G---GT--TT-TA--A----AG--A--GATTT--GCCACTAT-----AAA--A-T-G
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  6100 39 +      6782 CAGAA-TT-T-G----G---GT--TT-TA-------ACC-A--GATTTG-T-CATTAT-----AAA--A-T-A
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  136665 39 -    259118 CAAAG-TC-T-G-------AGT--TT-TA-------ACT-A--GATTGG-C-CATTAT-----AAA--A-T-G
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 I 13
s Trachypithecus_auratus.k141_738098                        27914 39 +     38948 CAGAA-TC-T-GGGTT---------T-TA-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-A
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   21636 39 -     32910 CAGAA-TC-T-GGGTT---------T-TA-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      3048 39 -     12939 CAGAA-TC-T-GGGTT---------T-TA-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-A
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       2966 39 -     14244 TAGAA-TC-T-GGGTT---------T-TA-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           44363 39 -     54611 CAGAA-TC-T-GGGTT---------T-TA-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        2160 39 -     11566 CAGAA-TC-T-GGGTT---------T-TA-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     4343 39 -     15592 CAGAA-TC-T-GGGTT---------T-TA-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          2995 39 +     14371 CAGAA-TC-T-GGGTT---------T-TA-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   1282 39 +     12481 TAGAA-TC-T-GGGTT---------T-TA-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        1156 39 -     24393 CAGAA-TC-T-GGGTT---------T-TA-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       6406 39 -     28054 CAGAA-TC-T-GGGTT---------T-TA-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44661190 39 -  44834318 CAGAA-TC-T-GGGTT---------T-TA-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       3506 39 +     13828 CAGAA-TC-T-GGGTT---------T-TA-------ACC-A--GATGTG-C-CATTAT-----AAA--A-T-G
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   5750 39 +     90398 CAGAA-GC-T-G----G-AT-T---T-TA-------ACT-A--GATTTG-T-CACTAC-----GAA--A-T-G
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16085939 39 +  31416278 CAAAA--CCT-G-------AGT--TT-TA-------ACC-A--GATTTA-T-GACTAT-----AAg--t-t-g
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2793720 35 -   3938065 CAAAA-TC-T-G-------------T-TA-------ACC-G--GATTTC-t-tgttat-----aaa--a-t-g
i Tupaia_chinensis.KB320831.1                           C 0 I 216
s Tupaia_tana.TupTan_flattened_line_68454                    5906 35 +     13056 CAAAA-TC-T-G-------------T-TA-------ACC-G--GATTTG-T-TGTTAT-----AAA--A-T-G
i Tupaia_tana.TupTan_flattened_line_68454               C 0 I 220
s Tursiops_truncatus.MRVK01000923.1                      69314021 44 -  96451834 CAGAA-GT-T-G------C---ATTT-TA-------ACT-A--GATTTG-T-CATTTTatgacaaa--a-t-g
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   1920 38 +     10241 CACAA-AC-T-G----AT-T-----T-AA-------ACC-G--GATTTA-T-CACTTT-----AAA--A-A-G
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 I 17
s Ursus_maritimus.KK498671.1                              6515415 38 +  28682327 CAGAA-TC-T-G----G---GT--TT-TA-------ACT-A--GAT-TG-t-tgttat-----aaa--a-t-g
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Vicugna_pacos.KN269600.1                                1525269 39 -   2331223 CAGAA-GC-T-G----G---GT--TT-TA-------ACT-A--AATTtg-t-cattat-----aaa--a-t-g
i Vicugna_pacos.KN269600.1                              C 0 I 8
s Vulpes_lagopus.VulLag_flattened_line_2045                138908 39 -    281493 TGGAA-AC-T-G-------AGT--TT-TA-------ACT-A--GATTTG-T-CGTTAT-----AAA--A-T-G
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       127487 39 -    134049 CAGAA-TC-T-G----GT-T-T---T-TA-------GG--TAGATTTG--T-CATTAC-----AAA--A-T-G
i Xerus_inauris.XerIna_scaffold_7898                    I 5 I 1
s Zalophus_californianus.ZalCal_flattened_line_4097        214889 39 -    227762 CAGAA-TC-C-A-------AGT--TT-TA-------ACT-A--GATTTG-T-CATTAT-----CAA--G-T-G
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     16436 36 -     20485 CAGAA-GC-T-G------C---ATTT-TA-------AC--T---GGAT--T-TGTCAT-----AAA--A-T-G
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           7520 44 -      8775 CAGAA-GT-T-G------C---ATTT-TA-------ACT-A--GATTTG-T-CATTATATGACAAA--A-T-G
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                701732 90 +    802869 I
e Procavia_capensis.ProCapCap_scaffold_149274                2467 1156 -      9567 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Megaderma_lyra.MegLyr_scaffold_3562                       64783 239 -    234502 I
e Heterohyrax_brucei.HetBruBak_scaffold_25354               61360 1157 +     73687 I
e Elephantulus_edwardii.JH947210.1                        7816992 12417 +  15467074 I
e Crocidura_indochinensis.CroInd_scaffold_848148              199  0 +      1327 C
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1008 325 -      5782 I
e Microtus_ochrogaster.CM001673.1                        22820341  4 -  98408828 I
e Varecia_variegata.k141_775891                             25501  3 -     33872 I
e Varecia_rubra.k141_432109                                  5966  3 -     20643 I
e Rattus_norvegicus.chr11                                13915860 1475 +  90463843 I
e Propithecus_verreauxi.k141_158021                         39953  3 -     48185 I
e Propithecus_tattersalli.k141_907138                       17689  3 -     53241 I
e Propithecus_perrieri.k141_7554                            18055  3 +     27322 I
e Propithecus_edwardsi.k141_1317105                         36132  3 -     44753 I
e Propithecus_diadema.k141_577245                           43745  3 +     52369 I
e Propithecus_coronatus.k141_1353159                         4402  3 +     11805 I
e Propithecus_coquerelli.NW_012147863.1                     19492  3 -     30946 I
e Prolemur_simus.MPIZ01000048.1                           6849325  3 +  12164890 I
e Perodicticus_potto.k141_713187                            25474  3 -     27972 I
e Perodicticus_ibeanus.k141_117958                           6160  3 -     23713 I
e Otolemur_garnettii.GL873528.1                          18009456  3 -  38779656 I
e Otolemur_crassicaudatus.k141_505435                        1475  3 -     53940 I
e Ondatra_zibethicus.OndZib_scaffold_6821                  125594  4 +    145789 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65670190  0 +  89412551 C
e Nycticebus_coucang.k141_2051882                            4581  0 +      6470 C
e Nycticebus_bengalensis.LG16                            65567855  0 -  95554990 C
e Nannospalax_galili.KL201303.1                            119159  6 +    362372 I
e Mirza_zaza.k141_226143                                     6369  3 +      8497 I
e Microcebus_murinus.CM007691.1                          16510980  3 +  47401472 I
e Loris_tardigradus.ctg97                                 3779150  0 +   6799190 C
e Loris_lydekkerianus.k141_550999                           11401  0 +     84689 C
e Lepilemur_septentrionalis.k141_578524                     32347  3 -     33031 I
e Lepilemur_ruficaudatus.k141_617879                        79356  3 +    116806 I
e Lepilemur_dorsalis.k141_134267                            54094  3 +     63517 I
e Lepilemur_ankaranensis.k141_884009                        24708  3 +     39228 I
e Lemur_catta.scaffold_1                                258407958  3 - 285822530 I
e Indri_indri.k141_5141390                                   1122  3 -      3181 I
e Hapalemur_occidentalis.k141_797938                        46279  3 -     54384 I
e Hapalemur_meridionalis.k141_186231                        29651  3 -     42470 I
e Hapalemur_griseus.k141_1387522                             6402  3 +     56096 I
e Hapalemur_gilberti.k141_279011                             1076  3 -     11661 I
e Hapalemur_alaotrensis.k141_1280836                         2596  3 +     10286 I
e Graphiurus_murinus.GraMur_scaffold_4493                   77863  0 +    118900 C
e Galagoides_demidoff.k141_1769638                          11100  3 +     27357 I
e Galago_senegalensis.k141_964197                           14034  3 -     43889 I
e Galago_moholi.ctg555                                     211660  3 -    847004 I
e Eulemur_sanfordi.k141_186399                              16595  3 -     29447 I
e Eulemur_rufus.k141_1620292                                33869  3 +     46535 I
e Eulemur_rubriventer.k141_411740                           19131  3 +     26808 I
e Eulemur_mongoz.k141_825972                                16675  3 +     27497 I
e Eulemur_fulvus.k141_653297                                12015  3 +    109717 I
e Eulemur_flavifrons.k141_903901                             8537  3 +     60246 I
e Eulemur_coronatus.k141_3240342                            12216  3 +     36558 I
e Eulemur_collaris.k141_311830                               5742  3 -      6809 I
e Eulemur_albifrons.k141_715837                              5810  3 +     13586 I
e Ellobius_talpinus.LOJH01090055.1                           7151  4 -      7838 I
e Ellobius_lutescens.LOEQ01003611.1                        240029  1 -    369425 I
e Daubentonia_madagascariensis.ctg11                     16845635  3 +  31942871 I
e Cheirogaleus_medius.k141_133808                            8812  3 +     13308 I
e Cheirogaleus_major.k141_1157592                           59764  3 -     68416 I
e Avahi_peyrierasi.k141_798820                               1105  3 +      6337 I
e Avahi_laniger.k141_2840928                                 7489  3 -     16375 I
e Arctocebus_calabarensis.k141_587554                        1753  3 +      9265 I
e Nomascus_siki_b.tarseq_80                             25641 26 -  18771707 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               14615 39 +    209709 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CACCAGTCAATATCTGTAGCAGTG
s Acinonyx_jubatus.LLWD01000356.1                         2034649 27 +   3721120 -----------------------------G---------------A---AA--CCG--A-A-------ATC-A-C--------CA---GCCAACATC--------AA
i Acinonyx_jubatus.LLWD01000356.1                       C 0 I 8
s Acomys_cahirinus.AcoCah_scaffold_1625                    113390 38 -    189883 AATAAATAAA-----A------T------A---------------A---AACCAA-A-A-T-------G-----T--------GT---GTGTATGTG--------TG
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 I 26
s Ailuropoda_melanoleuca.LNAT01000321.1                  10657965 31 +  23371972 a--------a-----a------t------g---------------a---aa--cca--a-a-------atC-A-C--------CA---GCCAATAAC--------CA
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 I 8
s Ailurus_fulgens.LNAC01000003.1                          7095318 31 -  16596857 A--------A-----A------T------G---------------C---AA--TCA--A-A-------ACC-A-C--------CA---GCCAATAAC--------TA
i Ailurus_fulgens.LNAC01000003.1                        C 0 I 8
s Allactaga_bullata.AllBul_scaffold_70162                   17561 30 -     22067 A--------C-----A------T------A---------------A---AACCAA-A-A-C-------A-----T--------TA---GTCAATATC--------CA
i Allactaga_bullata.AllBul_scaffold_70162               C 0 I 8
s Allenopithecus_nigroviridis.k141_2469532                   2346 39 -     60446 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CACCAGCCAATATCTGTGGCAGTG
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         3063 39 -     29318 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CACCAGCCAGTATCTGTGGCAGTG
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         1999 39 +     38766 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CACCAGCCAGTATCTGTGGCAGTG
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          2957 39 -     80423 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CACCAGCCAATATCTGTGGCAGTG
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            10923 39 -     18050 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CCTCAGGCAATATCGGCAGCAGTG
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_1710068                                640 38 +      1555 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CCTCAGGCAATATCGGC-GCAGTG
i Alouatta_caraya.k141_1710068                          C 0 C 0
s Alouatta_discolor.k141_811576                             11596 39 -     21359 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CCTCAGGCAATATCGGCAGCAGTG
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                1219 39 +      2129 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CCTCAGGCAATATCGGCAGCACTG
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_2177643                           603 39 -      1868 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CCTCAGGCAATATCGGCAGCAGTG
i Alouatta_macconnelli.k141_2177643                     C 0 C 0
s Alouatta_nigerrima.k141_3537692                             652 39 +      1660 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CCTCAGGCAATATCGGCAGCAGTG
i Alouatta_nigerrima.k141_3537692                       C 0 C 0
s Alouatta_palliata.k141_2764429                              565 39 -      1480 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CCTCAGGCAATATCGGCAGCAGTG
i Alouatta_palliata.k141_2764429                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            4645 39 -      4927 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CCTCAGGCAATATCGGCAGCAGTG
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_1531728                             780 39 -      1692 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CCTCAGGCAATATCGGCAGCACTG
i Alouatta_seniculus.k141_1531728                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3520759 25 +   4113121 a--------a-----a------t------a---------------a---aa--gca--a-a-------aac-a-c--------ca---gCCAC--------------
i Ammotragus_lervia.NIVO01013474.1                      C 0 I 8
s Anoura_caudifer.AnoCau_scaffold_422                      391171 18 -    631301 --------------------------------------------------------------------G-CTA-G--------AA---GCCAATATT--------TA
i Anoura_caudifer.AnoCau_scaffold_422                   I 13 I 8
s Antilocapra_americana.AntAmePen_scaffold_42841            31340 25 +     33004 A--------A-----A------T------A---------------A---AA--GCA--A-A-------AAC-A-C--------TA---GCCAC--------------
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 I 8
s Aotus_azarae.k141_3170768                                 63275 39 +     78111 A--------A-----A------T------G---------------C---AA--CCA--A-A-------A-----C--------CCCCAGTCAGTATCTGCAGCAGTG
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            6217 39 +     22701 A--------A-----A------C------C---------------T---AA--CCA--A-A-------A-----C--------CCCCAGTCAGTATCTGCAGCAGTG
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5750174 39 +   9889416 a--------a-----a------t------g---------------t---aa--ccA--A-A-------A-----C--------CCCCAGTCAGTATCTGCAGCAGTG
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             6763 39 -    104377 A--------A-----A------T------G---------------T---AA--CCA--A-A-------A-----C--------CCCCAGTCAATATCTGCAGCAGTG
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               6765 39 +     23246 A--------A-----A------T------G---------------T---AA--CCA--A-A-------A-----C--------CCCCAGTCAATATCTGCAGCAGTG
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     4311 28 +      5067 ---------------------------------------------ATAAAAC-CAAA-A-C-------T-----C--------CA---GTCAATGTG--------TA
i Aplodontia_rufa.AprRuf_scaffold_156013                I 2 I 8
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 9591 18 -     29036 --------------------------------------------------------------------GCC-A-G--------AA---GCCAATATT--------TA
i Artibeus_jamaicensis.ArtJam_scaffold_41619            I 13 I 8
s Ateles_geoffroyi_b.tarseq_2582                             9540034 39 +  39197703 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CCTCAGTCAATATCTGCAGCAGTG
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             61305 39 +     85812 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CCTCAGTCAATATCTGCAGCAGTG
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                12318 39 +     89302 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CCTCAGTCAATATCTGCAGCAGTG
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             16821 39 -     58268 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CCTCAGTCAATATCTGCAGCAGTG
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             64813 39 +    119057 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CCTCAGTCAATATCTGCAGCAGTG
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               6784 39 -     25888 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CCTCAGTCAATATCTGCAGCAGTG
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26380838 25 +  51448160 a--------a-----a------t------a---------------a---aa--cca--a-a-------acc-g-c--------CA---GCCAC--------------
i Balaenoptera_acutorostrata.KI537095.1                 C 0 I 8
s Balaenoptera_bonaerensis.DF502048.1                        6010 25 -     13118 a--------a-----a------t------a---------------a---aa--cca--a-a-------acc-g-C--------CA---GCCAC--------------
i Balaenoptera_bonaerensis.DF502048.1                   C 0 I 8
s Beatragus_hunteri.BeaHun_scaffold_21644                   43869 25 -     72089 A--------A-----A------T------A---------------A---AA--GCA--A-A-------AAC-A-C--------CA---GCCAC--------------
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 I 8
s Bison_bison.KN264915.1                                  6560485 25 +   6870073 a--------a-----a------t------a---------------a---aa--gca--a-a-------aat-a-c--------ca---GCCAA--------------
i Bison_bison.KN264915.1                                C 0 I 8
s Bos_indicus.CM003021.1                                138140600 25 - 161108492 a--------a-----a------t------a---------------a---aa--gca--a-a-------aat-a-c--------ca---GCCAA--------------
i Bos_indicus.CM003021.1                                C 0 I 8
s Bos_mutus.JH883513.1                                     573141 25 -    998990 a--------a-----a------t------a---------------a---aa--gca--a-a-------aat-a-c--------ca---GCCAA--------------
i Bos_mutus.JH883513.1                                  C 0 I 8
s Bos_taurus.CM000177.6                                 136296333 25 - 158972876 a--------a-----a------t------a---------------a---aa--gca--a-a-------aat-a-c--------ca---GCCAA--------------
i Bos_taurus.CM000177.6                                 C 0 I 8
s Bubalus_bubalis.KI419065.1                              1233413 25 -   1914593 a--------a-----a------t------t---------------a---aa--gca--a-a-------aac-a-c--------CA---GCCAC--------------
i Bubalus_bubalis.KI419065.1                            C 0 I 8
s Cacajao_ayresi.k141_724503                               114671 39 -    171031 A--------A-----A------T------G---------------G---AA--CGC--A-A-------A-----C--------CCCCAGTCAGTATCTGCAGCAGTG
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 13700 39 +    125063 A--------A-----A------T------G---------------G---AA--CGC--A-A-------A-----C--------CCCCAGTCAGTATCTGCAGCAGTG
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                15743 39 -    216513 A--------A-----A------T------G---------------G---AA--CGC--A-A-------A-----C--------CCCCAGTCAGTATCTGCAGCAGTG
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        8286 39 -    134917 A--------A-----A------T------G---------------G---AA--CGC--A-A-------A-----C--------CCCCAGTCAGTATCTGCAGCAGTG
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3220212  8 -   8989139 --------------------------------------------------------------------------c--------ca---gcCAC--------------
i Camelus_bactrianus.KN276303.1                         I 8 I 8
s Camelus_dromedarius.KN271192.1                           397913  8 -  15254737 --------------------------------------------------------------------------c--------ca---gcCAC--------------
i Camelus_dromedarius.KN271192.1                        I 8 I 8
s Camelus_ferus.KB016973.1                                2973649  8 +   6889770 --------------------------------------------------------------------------c--------ca---gcCAC--------------
i Camelus_ferus.KB016973.1                              I 8 I 8
s CanFam4.chr31                                          11520109 31 +  39901454 A--------A-----A------T------G---------------A---AA--CCA--A-A-------ATC-G-C--------CA---GCCAATATC--------GA
i CanFam4.chr31                                         C 0 I 8
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   15135 31 +     87036 A--------A-----A------T------G---------------A---AA--CCA--A-A-------ATT-G-C--------CA---GCCATTATC--------GA
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 I 8
s Canis_lupus_dingo.QKWQ01001993.1                       11266776 31 -  35597290 a--------a-----a------t------g---------------a---aa--cca--a-a-------atc-G-C--------CA---GCCATTATC--------GA
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 I 8
s Canis_lupus_familiaris.chr31                           11089310 31 +  39895921 a--------a-----a------t------g---------------a---aa--cca--a-a-------atc-G-C--------CA---GCCATTATC--------GA
i Canis_lupus_familiaris.chr31                          C 0 I 8
s Canis_lupus_orion.HG994411.1                           16456325 31 -  44759192 a--------a-----a------t------g---------------a---aa--cca--a-a-------atc-G-C--------CA---GCCATTATC--------GA
i Canis_lupus_orion.HG994411.1                          C 0 I 8
s Capra_aegagrus.CM003214.1                              21325834 25 + 157394656 a--------a-----g------t------a---------------a---aa--gca--a-a-------aac-a-c--------CA---GCCAC--------------
i Capra_aegagrus.CM003214.1                             C 0 I 8
s Capra_hircus.CM004562.1                               135707062 25 - 157403528 a--------a-----g------t------a---------------a---aa--gca--a-a-------aac-a-c--------CA---GCCAC--------------
i Capra_hircus.CM004562.1                               C 0 I 8
s Carlito_syrichta.NW_007248099.1                          309679 39 +    345090 a--------a-----a------t------a---------------a---aa--cca--a-a-------a-----c--------cacCAGTCAATGTCTGTAGCAGCA
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               60378 18 +     67245 --------------------------------------------------------------------GCC-A-G--------AA---GCCAATATT--------TA
i Carollia_perspicillata.CarPer_scaffold_4436           I 13 I 8
s Castor_canadensis.CasCan_scaffold_47037                   31735 29 +     33760 A--------A-----A------T------A---------------A---AA-TCAAA-C-C-------A-----C--------TA---GCCAATAGC--------C-
i Castor_canadensis.CasCan_scaffold_47037               C 0 I 1
s Catagonus_wagneri.CatWag_scaffold_1305                   159518 18 -    276539 A--------A-----A------G------A---------------A---AA--CCC--A-A-------ACC-A-C--------------------------------
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 I 8
s Cavia_aperea.AVPZ01000278.1                            15787280 18 -  24422027 a--------a-----a------t------a---------------a---aa-acag-ta-t-------a-----C--------C-----------------------
i Cavia_aperea.AVPZ01000278.1                           C 0 I 8
s Cavia_porcellus.DS562889.1                             15799216 18 -  24440124 a--------a-----a------t------a---------------a---aa-acag-ta-t-------a-----c--------C-----------------------
i Cavia_porcellus.DS562889.1                            C 0 I 8
s Cavia_tschudii.CavTsc_scaffold_488                       177407 18 +    436027 A--------A-----A------T------A---------------A---AA-ACAG-TA-T-------A-----C--------C-----------------------
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 I 8
s Cebus_albifrons.Contig22                               18891513 39 -  29618158 A--------A-----A------T------A---------------A---AA--CCA--A-A-------A-----C--------CCTCAGTCAATATCTGCAGCAGTG
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 9057 39 -     26817 A--------A-----A------T------A---------------A---AA--CCA--A-A-------A-----C--------CCTCAGTCAATATCTGCAGCAGTG
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                13300 39 +     25043 A--------A-----A------T------A---------------A---AA--CCA--A-A-------A-----C--------CCTCAGTCAATATCTGCAGCAGTG
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         8703 39 +     21754 A--------A-----A------T------A---------------A---AA--CCA--A-A-------A-----C--------CACCAGTCAATGTCTGTAGCAGCA
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4364529 31 +   7569818 a--------a-----a------t------a---------------a---aa--cca--a-a-------acc-a-c--------CA---GCCAATATC--------TA
i Ceratotherium_simum.JH767818.1                        C 0 I 8
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         4286 31 -      9338 A--------A-----A------T------A---------------A---AA--CCA--A-A-------ACC-A-C--------CA---GCCAATATC--------TA
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 I 8
s Cercocebus_atys.KQ010443.1                              6556293 39 +   6739814 a--------a-----a------t------g---------------a---aa--cca--a-A-------A-----C--------CACCAGCCAATATCTGTGGCAGTG
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      27767 39 +     60454 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CACCAGCCAATATCTGTGGCAGTG
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          2974 39 -     21101 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CCCCAGCCAATATCTGTGGCAGTG
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         60284 39 -    107033 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CACCAGCCAATATCTGTGGCAGTG
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        3163 39 -     17608 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CACCAGCCAATATCTGTGGCAGTG
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                           322 39 +     45019 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CACCAGCCAATATCTGTGGCAGTG
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                            406 39 +     15177 T--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CACCAGAAAATATCTGTGGCAGTG
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          3206 39 +     16677 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CACCAGCCAATATCTGTGGCAGTG
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           25375 39 +     35983 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CACCAGCCAATATCTGTGGCAGTG
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11991904 39 +  12117833 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CACCAGCCAATATCTGTGGCAGTG
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46478661 39 +  46592721 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CACCAGCCAATATCTGTGGCAGTG
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      42216 39 -     45581 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CACCAGCCAATATCTGTGGCAGTG
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       3218 39 +     35577 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CACCAGCCAATATCTGTGGCAGTG
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        2991 39 -     25661 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CACCAGCCAATATCTGTGGCAGTG
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        2971 39 -     17744 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CACCAGCCAATATCTGTGGCAGTG
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        22576 39 +     37128 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CACCAGCCAATATCTGTGGCAGTG
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           3403 45 -      6963 A--------A-----A------T------AA-CCAAAATAAAAGGA---AA--CCA--A-A-------ACC-A-C--------CA---GCTCTTATC--------TT
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 I 8
s Cheracebus_lucifer.k141_619653                             6328 39 -     18223 A--------A-----A------T------G---------------G---AA--CCC--A-A-------A-----C--------CCTCAGTCAGTATCTGCAGCAGTG
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             23346 39 +     25473 A--------A-----A------T------G---------------G---AA--CCC--A-A-------A-----C--------CCTCAGTCAGTATCTGCAGCAGTG
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           42386 39 +     57117 A--------A-----A------T------G---------------G---AA--CCC--A-A-------A-----C--------CCTCAGTCAGTATCTGCAGCAGTG
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          47065 39 +     54541 A--------A-----A------T------G---------------G---AA--CCC--A-A-------A-----C--------CCTCAGTCAGTATCTGCAGCAGTG
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15962370 17 +  43084221 a--------a-----a------t------a---------------a---aa-ataa-ta-c-------a-----c--------------------------------
i Chinchilla_lanigera.JH721867.1                        C 0 I 7
s Chiropotes_israelita.k141_1189915                         71872 39 +    196370 A--------A-----A------T------G---------------G---AA--CCA--A-A-------A-----C--------CCCCAGTCAGTATCTGCAGCAGTG
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          16052 39 +     40510 A--------A-----A------T------G---------------G---AA--CCA--A-A-------A-----C--------CCCCAGTCAGTATCTGCAGCAGTG
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15140573 39 -  15256731 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CACCAGCCAATATCTGTGGCAGTG
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      35182 39 -     53260 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CACCAGCCAATATCTGTGGCAGTG
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101145741 39 + 101219884 a--------a-----a------t------g---------------a---aa--cca--a-A-------A-----C--------CACCAGCCAGTATCTGTGGCAGTG
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                17103 45 -     21363 A--------A-----A------G-A----AA-CCAAAATAAAAGAG---AA--ACA--A-A-------A-C-C-C--------CA---GCTATTATC--------TT
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 I 8
s Choloepus_hoffmanni.KN194586.1                           762408 45 +    964067 a--------a-----a------g-----aa-accaaaataaaagag---aa--aca--a-a-------a-c-c-c--------CA---GCTATTATC--------TT
i Choloepus_hoffmanni.KN194586.1                        C 0 I 8
s Colobus_angolensis.KN985967.1                          10887470  2 +  10971483 A--------A-------------------------------------------------------------------------------------------------
i Colobus_angolensis.KN985967.1                         C 0 I 517
s Colobus_guereza.LG08                                  147665662 39 + 156195979 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CACCAGCCAATACCTGTGGCAGTG
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            17645 39 +     23629 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CACCAGCCAATACCTGTGGCAGTG
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60614234 27 +  78930452 -----------------------------a---------------a---aa--tca--a-a-------acc-a-c--------ca---cCCAATATC--------TA
i Condylura_cristata.JH655880.1                         C 0 I 770
s Cricetulus_griseus.LT883672.1                          53029848 36 +  72327488 a--------a-----a------t------a---------------a---aaca-a--aaat-gccagtg-----t--------gt---gtgtgtgtg--------tg
i Cricetulus_griseus.LT883672.1                         C 0 I 68
s Crocidura_indochinensis.CroInd_scaffold_848148              199 11 +      1327 ----------------------------------------------------------------------------------------ACCAAAATA--------TA
i Crocidura_indochinensis.CroInd_scaffold_848148        C 0 I 8
s Cryptoprocta_ferox.CryFer_flattened_line_19014            52667 31 -     70449 A--------A-----A------T------G---------------A---AA--CCA--A-A-------ATC-A-C--------CA---GCCAACATC--------AA
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 7 I 8
s Ctenodactylus_gundi.CteGun_scaffold_447                  209066 30 -    956709 A--------A-----A------T------A---------------A---AA-ACCAA-A-T-------A-----T--------CT---GCCACTGCC--------TC
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 I 8
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 31715 18 -     67205 A--------A-----A------T------C---------------A---AA-ACAA-TA-T-------A-----C--------C-----------------------
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 I 4
s Cuniculus_paca.CunPac_flattened_line_16637                18409 18 +     26546 A--------A-----A------T------T---------------A---AA-ACAA-CA-T-------A-----G--------C-----------------------
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 I 8
s Dasyprocta_punctata.DasPun_flattened_line_634             59500 18 -    236241 A--------A-----A------C------A---------------C---AA-ACAA-TA-T-------A-----C--------C-----------------------
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 I 8
s Dasypus_novemcinctus.JH568778.1                          184293 24 -   6883506 ---------------------------------------------a---aa--ccc--a-a-------acc-A-T--------CA---GCTATTATC----------
i Dasypus_novemcinctus.JH568778.1                       I 15 C 0
s Delphinapterus_leucas.KZ290064.1                       80037462 25 -  96802777 a--------a-----a------t------a---------------a---aa--cca--a-a-------acc-g-c--------CA---GCCAC--------------
i Delphinapterus_leucas.KZ290064.1                      C 0 I 8
s Desmodus_rotundus.KZ672188.1                           18699663 18 -  18957592 --------------------------------------------------------------------acC-A-G--------AA---GCCAATATT--------TA
i Desmodus_rotundus.KZ672188.1                          I 13 I 8
s Dicerorhinus_sumatrensis.PEKH010003161.1                 323181 31 +    993696 a--------a-----a------t------a---------------a---aa--cca--a-a-------acc-a-c--------CA---GCCAATATC--------TA
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 I 8
s Diceros_bicornis.DicBicMic_scaffold_9545                   3833 31 +    151128 A--------A-----A------T------A---------------A---AA--CCA--A-A-------ACC-A-C--------CA---GCCAATATC--------TA
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 I 8
s Dinomys_branickii.DinBra_scaffold_1996                   157637 18 +    228994 A--------A-----A------T------A---------------A---AA-ATAG-TA-C-------T-----C--------C-----------------------
i Dinomys_branickii.DinBra_scaffold_1996                C 0 I 8
s Dipodomys_ordii.KN672545.1                              3657006 15 +   4240102 C--------A-----A------T------A---------------A---AA-TCAAA-A-A----------------------------------------------
i Dipodomys_ordii.KN672545.1                            C 0 I 19
s Dipodomys_stephensi.DipSte_scaffold_44365                 28649 15 +     28912 C--------A-----A------T------A---------------A---AA-TCAAA-A-A----------------------------------------------
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 I 19
s Dolichotis_patagonum.DolPat_scaffold_14102                36726 18 -     73477 A--------A-----A------T------G---------------A---AA-ACAA-TA-T-------A-----C--------C-----------------------
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 I 8
s Echinops_telfairi.JH980316.1                           22999575 14 -  44670279 A--------A-----C------C------A---------------A---CA--CCC--A-A-------A--------------------------------------
i Echinops_telfairi.JH980316.1                          C 0 I 11
s Eidolon_helvum.KE772537.1                                 12894 29 +     24177 ---------------a------t------a---------------a---aa--gca--a-a-------acc-a-g--------CA---GCCAATATT--------TA
i Eidolon_helvum.KE772537.1                             C 0 I 8
s Elaphurus_davidianus.JRFZ01086400.1                     1492099 25 +   1727528 a--------a-----a------t------a---------------a---ag--gca--a-a-------aac-a-c--------CA---GCCAC--------------
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 I 8
s Enhydra_lutris.KZ291749.1                              85872842 31 +  99434291 a--------a-----a------t------g---------------c---aa--cCA--A-A-------ATC-A-C--------CA---ACCAATAAC--------TA
i Enhydra_lutris.KZ291749.1                             C 0 I 8
s Eptesicus_fuscus.JH977687.1                             4707587 31 +   6522550 a--------a-----a------t------c---------------a---aa--gca--a-A-------ATC-A-T--------GA---GCCAATATT--------TA
i Eptesicus_fuscus.JH977687.1                           C 0 I 8
s Equus_asinus.JREZ01000062.1                             5853621 31 -   7175178 a--------a-----a------t------a---------------a---aa--cca--a-c-------aCC-A-C--------TT---GCCAATATC--------TA
i Equus_asinus.JREZ01000062.1                           C 0 I 8
s Equus_caballus.CM000402.2                              13352126 31 +  41866177 a--------a-----a------t------a---------------a---aa--cca--a-c-------ACC-A-C--------TC---GCCAATATC--------TA
i Equus_caballus.CM000402.2                             C 0 I 8
s Equus_przewalskii.ATBW01073585.1                          13615 31 +     92910 a--------a-----a------t------a---------------a---aa--cca--a-c-------ACC-A-C--------TC---GCCAATATC--------TA
i Equus_przewalskii.ATBW01073585.1                      C 0 I 8
s Erinaceus_europaeus.JH835290.1                         11534895 36 +  16010500 a--------atgaaaa------c------a---------------a---aa--aaa--a-a-------gtc-a-c--------ca---gtcAATATC--------TA
i Erinaceus_europaeus.JH835290.1                        I 11 I 8
s Erythrocebus_patas.Contig8                             48777752 39 -  48907691 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CACCAGCCAGTATCTGTGGCAGTG
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          315678 25 +    330699 A--------A-----A------T------A---------------A---AA--CCA--A-A-------ACC-G-C--------CA---GCCAC--------------
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 I 8
s Eubalaena_japonica.EubJap_flattened_line_7756             62131 25 +     89355 A--------A-----A------T------A---------------A---AA--CCA--A-A-------ACC-G-C--------CA---GCCAC--------------
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 I 8
s Felis_catus.CM001386.2                                129893617 31 - 159252932 a--------a-----a------t------g---------------a---aa--ccg--a-A-------ATC-A-C--------CA---GCCAACATC--------AA
i Felis_catus.CM001386.2                                C 0 I 8
s Felis_catus_fca126.CM031420.1                         129280701 31 - 158578461 a--------a-----a------t------g---------------a---aa--ccg--a-A-------ATC-A-C--------CA---GCCAACATC--------AA
i Felis_catus_fca126.CM031420.1                         C 0 I 8
s Felis_nigripes.FelNig_flattened_line_8080                 21841 31 +     52776 A--------A-----A------T------G---------------A---AA--CGG--A-A-------ATC-A-C--------CA---GCCAACATC--------AA
i Felis_nigripes.FelNig_flattened_line_8080             C 0 I 8
s Fukomys_damarensis.KN123630.1                          13892117 16 -  19261668 c--------t-----g------t------a---------------a---aa---aa-gG-T-------A-----C--------A-----------------------
i Fukomys_damarensis.KN123630.1                         C 0 I 6
s Galeopterus_variegatus.GalVar_scaffold_354               156959 13 +    324696 -----------------------------------------------------------------------------------CA---GCCAGTATC--------AG
i Galeopterus_variegatus.GalVar_scaffold_354            I 12 I 8
s Giraffa_tippelskirchi.LVKQ01S012154.1                    181877 25 -    189561 a--------a-----a------t------a---------------a---aa--gta--a-a-------aac-a-c--------cA---GCCAC--------------
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 I 8
s Glis_glis.GliGli_scaffold_79770                           14410 21 -     18683 -----------------------------------------------------CAAA-A-T-------A-----C--------CA---GCTAATACT--------TG
i Glis_glis.GliGli_scaffold_79770                       I 9 I 8
s Gorilla_beringei.k141_111300                               6325 39 -     14630 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CACCAGTCAACATCTGTAGCAGTG
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119653425 39 - 195582420 a--------a-----a------t------g---------------a---aa--cca--a-A-------A-----C--------CACCAGTCAACATCTGTAGCAGTG
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              17865 31 +     53719 A--------A-----A------T------G---------------A---AA--CCA--A-A-------ACC-A-C--------CA---GCCAATATC--------AA
i Helogale_parvula.HelPar_flattened_line_22962          I 7 I 8
s Hemitragus_hylocrius.HemHyl_scaffold_16669                28119 25 -     91191 A--------A-----A------T------A---------------A---AA--GCA--A-A-------AAC-A-C--------CA---GCCAC--------------
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 2 I 8
s Heterocephalus_glaber.JH602058.1                        2551737 12 +  31725842 -------------------------------------------------aa-ccaa-ta-t-------a-----c--------C-----------------------
i Heterocephalus_glaber.JH602058.1                      I 6 I 7
s Hippopotamus_amphibius.HipAmp_scaffold_1308              147762 25 +    277961 A--------A-----A------T------A---------------A---GA--CCA--A-C-------A-C-TGC--------CA---GCCAC--------------
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 I 8
s Hipposideros_armiger.JXIK01001085.1                      279040 34 -    477199 ---------------atgtaa-t------a---------------a---aa--gca--A-A-------ACC-G-C--------CA---GTCCATATT--------TA
i Hipposideros_armiger.JXIK01001085.1                   C 0 I 8
s Hipposideros_galeritus.HipGal_scaffold_345408                41 34 -       919 ---------------ATGTAA-T------A---------------A---AA--GCA--A-A-------ACC-G-C--------CA---GCCCATATT--------TA
i Hipposideros_galeritus.HipGal_scaffold_345408         C 0 I 8
s Hoolock_leuconedys.ctg79                                      6018 39 -   7690867 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CACCAGTCAATATCTGTAGCAGTG
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 17941 31 -     67322 A--------A-----A------T------G---------------A---AA--CCA--A-A-------ATC-A-C--------CA---GCCAACATC--------AA
i Hyaena_hyaena.HyaHya_flattened_line_20729             I 7 I 8
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19638 11 -    119109 --------------------------------------------------A-AAAA-TA-T-------A-----T--------T-----------------------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       I 3 I 8
s Hylobates_abbotti.k141_164775                               801 39 -      2073 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CACCAGTCAATATCTGTAGCAGTG
i Hylobates_abbotti.k141_164775                         C 0 C 0
s Hylobates_agilis.k141_55853                                 386 39 -      1487 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CACCAGTCAATATCTGTAGCAGTG
i Hylobates_agilis.k141_55853                           n 78 I 84
s Hylobates_klossii.k141_285563                               536 39 +      1026 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CACCAGTCAATATCTGTAGCAGTG
i Hylobates_klossii.k141_285563                         I 193 I 84
s Hylobates_pileatus_b.ContigUN                                 14625707 39 -  25970782 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CACCAGTCAATATCTGTAGCAGTG
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_950183                              404 39 +      2027 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CACCAGTCAATATCTGTAGCAGTG
i Hylobates_muelleri.k141_950183                        I 39 C 0
s Hylobates_pileatus_a.tarseq_592                             34867 39 -     60944 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CACCAGTCAATATCTGTAGCAGTG
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     6796 18 +     22540 A--------A-----A------T------A---------------A---AAC-CAA-TA-T-------A-----C--------C-----------------------
i Hystrix_cristata.HysCri_scaffold_50788                I 13 I 8
s Ictidomys_tridecemlineatus.JH393315.1                   7126494 20 +  13083262 -------------------------------------------------aa-acca-aa-t-------c-----c--------C-------AATGCC--------CA
i Ictidomys_tridecemlineatus.JH393315.1                 I 1 I 8
s Inia_geoffrensis.IniGeo_flattened_line_66725               9667 25 +     17520 A--------A-----A------T------A---------------A---AA--CCA--A-A-------ACC-G-C--------CA---GCCAC--------------
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 I 8
s Jaculus_jaculus.JH725517.1                              8566575 30 +  11848649 A--------C-----A------T------A---------------A---AAGCAA-A-A-C-------A-----T--------TA---GTCAATATC--------CA
i Jaculus_jaculus.JH725517.1                            C 0 I 8
s Kogia_breviceps.KogBre_flattened_line_35920               24274 25 +     37189 A--------A-----A------T------A---------------A---AA--CCA--A-A-------ACC-G-C--------CA---GCCAC--------------
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 I 8
s Lagothrix_lagothricha.k141_12968                          50903 39 -    147782 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CCTCAGTCAATATCTGCAGTAGTG
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3086628 31 -   3498232 a--------a-----a------t------g---------------a---aa--cca--a-A-------ATC-A-C--------CA---GCCAATAAC--------TA
i Leptonychotes_weddellii.KB714749.1                    C 0 I 8
s Lepus_americanus.LepAme_scaffold_62849                    13922 24 +     22452 -------------------------------------------------------A--A-A-------C-----CACATCCCTCA---CC-AAGT-C--------TG
i Lepus_americanus.LepAme_scaffold_62849                I 3 I 8
s Lipotes_vexillifer.KE558548.1                            136624 25 +   3060487 a--------a-----a------t------a---------------a---aa--cca--a-a-------acc-a-c--------cA---GCCAC--------------
i Lipotes_vexillifer.KE558548.1                         C 0 I 8
s Lophocebus_aterrimus.ctg55                             19249370 39 +  19376315 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CACCAGTCAATATCTGTGGCAGTG
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loxodonta_africana.GL010040.1                          20595455 31 -  62548349 a--------a-----a------t------a---------------a---aa--ccc--a-a-------acc-a-c--------ca---GCTGATATC--------AG
i Loxodonta_africana.GL010040.1                         C 0 I 8
s Lycaon_pictus.CM007556.1                               11088766 31 +  39895028 a--------a-----a------t------g---------------a---aa--cca--a-a-------atc-G-C--------CA---GCCATTATC--------GA
i Lycaon_pictus.CM007556.1                              C 0 I 8
s Macaca_arctoides.k141_2201161                             21128 39 +     74745 A--------A-----A------T------G---------------A---AA--CCA--A-C-------A-----C--------CACCAGCCAATATCTGTGGCAGTG
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12707588 39 +  12821369 A--------A-----A------T------G---------------A---AA--CCA--A-C-------A-----C--------CACCAGCCAATATCTGTGGCAGTG
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                 165 39 -     26467 A--------A-----A------T------G---------------A---AA--CCA--A-C-------A-----C--------CACCAGCCAATATCTGTGGCAGTG
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           48034 39 +     63263 A--------A-----A------T------G---------------A---AA--CCA--A-C-------A-----C--------CACCAGCCAATATCTGTGGCAGTG
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                  144 39 -     26361 A--------A-----A------T------G---------------A---AA--CCA--A-C-------A-----C--------CACCAGCCAATATCTGTGGCAGTG
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 3319 39 -      7381 A--------A-----A------T------G---------------A---AA--CCA--A-C-------A-----C--------CACCAGCCAATATCTGTGGCAGTG
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  46557 39 -     79256 A--------A-----A------T------G---------------A---AA--CCA--A-C-------A-----C--------CACCAGCCAATATCTGTGGCAGTG
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196036659 39 + 196197964 a--------a-----a------t------g---------------a---aa--cca--a-C-------A-----C--------CACCAGCCAATATCTGTGGCAGTG
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11446825 39 +  11645122 a--------a-----a------t------g---------------a---aa--cca--a-C-------A-----C--------CACCAGCCAATATCTGTGGCAGTG
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   5511 39 -     46448 A--------A-----A------T------G---------------A---AA--CCA--A-C-------A-----C--------CACCAGCCAATATCTGTGGCAGTG
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                3178 39 -     13212 A--------A-----A------T------G---------------A---AA--CCA--A-C-------A-----C--------CACCAGCCAATATCTGTGGCAGTG
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 16854 39 -     55006 A--------A-----A------T------G---------------A---AA--CCA--A-C-------A-----C--------CACCAGCCAATATCTGTGGCAGTG
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43841960 39 +  43892939 A--------A-----A------T------G---------------A---AA--CCA--A-C-------A-----C--------CACCAGCCAATATCTGTGGCAGTG
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               18141 39 -     24607 A--------A-----A------T------G---------------A---AA--CCA--A-C-------A-----C--------CACCAGCCAATATCTGTGGCAGTG
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               5508 39 -     27140 A--------A-----A------T------G---------------A---AA--CCA--A-C-------A-----C--------CACCAGCCAATATCTGTGGCAGTG
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43438542 39 -  43563597 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CACCAGCCAGTATCTGTGGCAGTG
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4451356 39 -   4543643 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CACCAGCCAATATCTGTGGCAGTG
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            146711 31 +    252755 a--------a-----a------t------a---------------a---ga--cCA--A-A-------GCC-A-C--------CA---GCCAATAGC--------TA
i Manis_javanica.JSZB01003966.1                         C 0 I 8
s Manis_pentadactyla.KN017078.1                             36853 31 +     58827 a--------a-----a------t------a---------------a---ga--aca--a-a-------gcc-a-C--------CA---GCCAATAGC--------TA
i Manis_pentadactyla.KN017078.1                         C 0 I 8
s Marmota_marmota.CZRN01000005.1                         36874313 19 +  64221397 -------------------------------------------------aa-acca-aa-a-------c-----c--------c-------aaTGCC---------A
i Marmota_marmota.CZRN01000005.1                        I 1 I 6
s Mellivora_capensis.MelCap_flattened_line_15433             1654 31 -     87323 A--------A-----A------T------G---------------C---AA--CCA--A-A-------ATC-A-C--------CA---GCCAATAAC--------TA
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 I 8
s Meriones_unguiculatus.MerUng_scaffold_52233               13835 36 +     15977 A--------A-----A------T------A---------------A---aagcaa--aa-t-gacagtg-----t--------gt---gtgtgtgtg--------tg
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 I 44
s Mesocricetus_auratus.KB708139.1                         1047530 35 -  26018355 A--------A-----A------T------A---------------A---ACC--G-A-AAt-gctagtg-----t--------at---gtgtgtgtg--------ca
i Mesocricetus_auratus.KB708139.1                       C 0 I 60
s Mesoplodon_bidens.MesBid_scaffold_227248                    951 25 -      1377 A--------A-----A------T------A---------------A---AA--CCC--A-A-------ACC-G-C--------CA---GCCAC--------------
i Mesoplodon_bidens.MesBid_scaffold_227248              C 0 I 8
s Micronycteris_hirsuta.MicHir_scaffold_37978               23567 18 -     32043 --------------------------------------------------------------------A-C-AAG--------AA---GCCAACATT--------TA
i Micronycteris_hirsuta.MicHir_scaffold_37978           I 13 I 8
s Miniopterus_natalensis.LDJU01000022.1                   8210725 31 +  10048721 a--------a-----a------t------c---------------a---ag--gCA--A-A-------ACC-A-T--------GA---GCCAATATT--------TA
i Miniopterus_natalensis.LDJU01000022.1                 C 0 I 7
s Miniopterus_schreibersii.MinSch_scaffold_24116            35214 31 +     45743 A--------A-----A------T------C---------------A---AG--GCA--A-A-------ACC-A-T--------GA---GCCAATATT--------TA
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 I 7
s Miopithecus_ogouensis.k141_2935907                         3103 39 +     29742 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CACCAGCCAATATCTGTGGCAGTG
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        12144 31 -    104932 A--------A-----A------T------G---------------A---AA--CCA--A-A-------ATC-A-C--------CA---GCCAATAAC--------TA
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 I 8
s Monodon_monoceros.MonMon_M_scaffold_5598                 147052 25 +    154973 A--------A-----A------T------A---------------A---AA--CCA--A-A-------ACC-G-C--------CA---GCCAC--------------
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 I 8
s Mormoops_blainvillei.MorMeg_scaffold_2952                162089 18 +    265003 --------------------------------------------------------------------A-CGA-G--------GA---GCCAATATC--------TA
i Mormoops_blainvillei.MorMeg_scaffold_2952             I 13 I 8
s Moschus_moschiferus.MosMos_scaffold_78805                  2134 25 -     19904 A--------A-----A------T------A---------------A---AA--GCA--A-A-------AAC-A-C--------CA---GCCAC--------------
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 I 8
s Mungos_mungo.MunMun_flattened_line_8729                  145560 31 -    168139 A--------A-----A------T------G---------------A---AA--CCA--A-A-------ATC-A-C--------CA---GCCAATATC--------AA
i Mungos_mungo.MunMun_flattened_line_8729               I 7 I 8
s Murina_feae.MurFea_scaffold_2254                          22077 31 -    100666 A--------A-----A------T------C---------------A---AA--GCA--A-A-------ATC-A-T--------GA---GCCAGTATT--------TA
i Murina_feae.MurFea_scaffold_2254                      C 0 I 8
s Muscardinus_avellanarius.MusAve_scaffold_9643             12910 21 +     98495 -----------------------------------------------------CAAA-A-T-------G-----C--------CA---ACAAATACC--------TG
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 3 I 9
s Mustela_putorius.JH417978.1                             4425022 31 -  28371801 a--------a-----a------t------g---------------c---aa--cCA--A-A-------ATC-A-C--------TA---GCCAATAAC--------TA
i Mustela_putorius.JH417978.1                           C 0 I 8
s Myocastor_coypus.MyoCoy_scaffold_3653                     91040 18 -    117718 A--------A-----A------T------C---------------A---AA-GCAG-TA-T-------A-----C--------A-----------------------
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 I 4
s Myotis_brandtii.KE161952.1                               969694 31 +   8389877 a--------a-----a------t------c---------------a---aa--gca--a-A-------ATC-A-T--------GA---GCCAATATT--------TA
i Myotis_brandtii.KE161952.1                            C 0 I 8
s Myotis_davidii.KB114863.1                               5021118 31 +   6462685 a--------a-----a------t------c---------------a---aa--gca--A-A-------ATC-A-T--------GA---ACCAATATT--------TA
i Myotis_davidii.KB114863.1                             C 0 I 8
s Myotis_lucifugus.GL429887.1                             3467196 31 -   3747815 a--------a-----a------t------c---------------a---aa--gca--a-A-------ATC-A-T--------GA---GCCAATATT--------TA
i Myotis_lucifugus.GL429887.1                           C 0 I 8
s Myotis_myotis.MyoMyo_scaffold_6123                        12439 31 +     66751 A--------A-----A------T------C---------------A---AA--GCA--A-A-------ATC-A-T--------GA---GCCAATATT--------TA
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 I 8
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             5668 41 -      8794 A--------A-----A------G------AAA-TAAAA-A---GAA---AA--ACA--A-A-------ACC-A-C--------CA---GCTATTATC--------TT
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 I 8
s Nasalis_larvatus.k141_153429                               9582 39 +     48152 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CACCAGTCAATACCTGTGGCAGTG
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4485534 31 -  14209539 a--------a-----a------t------g---------------a---aa--cca--a-a-------aTC-A-C--------CA---GCCAATAAC--------TA
i Neomonachus_schauinslandi.NINY01007774.1              C 0 I 8
s Neophocaena_asiaeorientalis.KZ688543.1                  3951664 25 -   4490290 a--------a-----a------t------a---------------a---aa--cca--a-a-------acc-a-c--------cA---GCCAC--------------
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 I 8
s Nomascus_annamensis.k141_220265                            1479 39 +      1763 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CACCAGGCAATATCTGTAGCAGTG
i Nomascus_annamensis.k141_220265                       I 474 C 0
s Nomascus_concolor.k141_226614                              2269 39 -      5092 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CACCAGTCAATATCTGTAGCAGTG
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_1004198                            832 39 +      1448 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----T--------CACCAGTCAATATCTGTAGCAGTG
i Nomascus_gabriellae.k141_1004198                      C 0 C 0
s Nomascus_siki_a.k141_1035055                                  583 39 -      3602 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CACCAGTCAATATCTGTAGCAGTG
i Nomascus_siki_a.k141_1035055                            I 39 I 161
s Nyctereutes_procyonoides.CAJHUB010000786.1                31567 31 +   3668941 a--------a-----a------t------g---------------a---aa--cca--a-a-------atc-G-C--------CA---GGCTTTATC--------GA
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 I 8
s Ochotona_princeps.JH802095.1                            4996677 17 -  23139505 -------------------------------------------------------a--g-a-------c-----c--------cA---GCTAAGC-C--------TG
i Ochotona_princeps.JH802095.1                          I 3 I 8
s Octodon_degus.JH651621.1                                3686534 18 +  10294119 a--------a-----a------t------c---------------a---aa-acag-TA-T-------A-----C--------C-----------------------
i Octodon_degus.JH651621.1                              C 0 I 4
s Odobenus_rosmarus.KB229369.1                             680201 31 -   3126709 a--------a-----a------t------g---------------a---aa--cca--a-A-------ATC-A-C--------CA---GCCAATAAC--------TA
i Odobenus_rosmarus.KB229369.1                          C 0 I 8
s Odocoileus_virginianus.KZ101650.1                       1080314 25 +   1425656 a--------a-----a------t------a---------------a---aa--gca--a-a-------aac-a-c--------ca---gCTAC--------------
i Odocoileus_virginianus.KZ101650.1                     C 0 I 8
s Okapia_johnstoni.LVCL01S0017931.1                         37605 25 +     78940 a--------a-----a------t------a---------------a---aa--gca--a-a-------aac-a-c--------ca---gCCAC--------------
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 I 8
s Onychomys_torridus.OnyTor_scaffold_12578                  37719 36 +     62360 a--------a-----a------t------a---------------g---aa-cca--aaat-accagtg-----t--------tt---gtgtgtgtg--------tg
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 I 39
s Orcinus_orca.KB316965.1                                 7225349 25 -   7562323 a--------a-----a------t------a---------------a---aa--ccc--a-a-------acc-G-C--------CA---GCCAC--------------
i Orcinus_orca.KB316965.1                               C 0 I 8
s Orycteropus_afer.OryAfe_flattened_line_13509              60588 30 -     66828 A--------A-----A------T------A---------------A---AA--CCA--A-A-------ACC-A-C--------AA---GGTAATATC---------T
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 I 8
s Oryctolagus_cuniculus.CM000803.1                      141876959 24 + 163896628 -------------------------------------------------------a--a-a-------c-----caCACCCCTCA---GC-AAGT-C--------TG
i Oryctolagus_cuniculus.CM000803.1                      I 3 I 8
s Otocyon_megalotis.JAEUCK010005121.1                      308851 31 -    505867 A--------A-----G------T------G---------------A---AA--CCA--A-A-------ATC-C-C--------CA---GCCATTATC--------GA
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 I 8
s Ovis_aries.CM001582.2                                 134077910 25 - 275406953 a--------a-----a------t------a---------------a---aa--gca--a-a-------aac-a-c--------ca---gCCAC--------------
i Ovis_aries.CM001582.2                                 C 0 I 8
s Ovis_canadensis.OviCan_scaffold_6251                      79125 25 +    140051 A--------A-----A------T------A---------------A---AA--GCA--A-A-------AAC-A-C--------CA---GCCAC--------------
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 I 8
s Pan_paniscus.CM003386.1                               127575691 39 - 205426864 a--------a-----a------t------g---------------a---aa--cca--a-A-------A-----C--------CACCAGTCAATATCTGTAGCAGTG
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120152845 39 - 196562556 a--------a-----a------t------g---------------a---aa--cca--a-A-------A-----C--------CACCAGTCAATATCTGTAGCAGTG
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  34984 31 +    295523 A--------A-----A------T------G---------------A---AA--CCA--A-A-------CTC-A-C--------CA---GCCAACATC--------AA
i Panthera_onca.PanOnc_flattened_line_1615              C 0 I 8
s Panthera_pardus.KV860323.1                              3638734 31 +  18214204 a--------a-----a------t------g---------------a---aa--cca--a-a-------ctC-A-C--------CA---GCCAACATC--------AA
i Panthera_pardus.KV860323.1                            C 0 I 8
s Panthera_tigris.KE721879.1                              5028410 31 -   6340057 a--------a-----a------t------g---------------a---aa--cca--a-a-------ctc-A-C--------CA---GCCAACATC--------AA
i Panthera_tigris.KE721879.1                            C 0 I 8
s Pantholops_hodgsonii.KE114631.1                         1066760 25 -   1292953 a--------a-----a------t------a---------------a---aa--gca--a-a-------aac-a-c--------ca---gCCAC--------------
i Pantholops_hodgsonii.KE114631.1                       C 0 I 8
s Papio_anubis.CM001492.2                               188157340 39 - 188283584 a--------a-----a------t------g---------------a---aa--cca--a-A-------A-----C--------CACCAGCCAATATCTGTGGCAGTG
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                               432 39 +     25005 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CACCAGCCAATATCTGTGGCAGTG
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47514717 39 +  47705337 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CACCAGCCAATATCTGTGGCAGTG
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 68703 39 -    104429 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CACCAGCCAATATCTGTGGCAGTG
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    7236 39 +     14967 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CACCAGCCAATATCTGTGGCAGTG
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 3097 39 -      7628 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CACCAGCCAATATCTGTGGCAGTG
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    116442 31 -    135482 A--------A-----A------T------G---------------A---AA--CCA--A-A-------ATC-A-C--------CA---GCAAACATC--------AA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 I 2 I 8
s Perognathus_longimembris.PerPac_flattened_line_19359        685 30 +     49596 A--------A-----A------T------A---------------A---AA-TCACA-A-C-------T-----T--------CA---GCAAGTGTC--------TG
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 I 8
s Peromyscus_maniculatus.KI615518.1                       4950970 36 -   8017169 A--------A-----A------T------A---------------G---AAC-CA-A-Aatagc-actg-----t--------gt---gtgtgtgtg--------tg
i Peromyscus_maniculatus.KI615518.1                     C 0 I 114
s Petromus_typicus.PetTyp_scaffold_33007                    14265 18 -     36578 A--------A-----A------T------A---------------A---AA-TCAA-TA-C-------A-----C--------C-----------------------
i Petromus_typicus.PetTyp_scaffold_33007                C 0 I 8
s Phocoena_phocoena.PhoPho_flattened_line_11948            121953 25 -    122454 A--------A-----A------T------A---------------A---AA--CCA--A-A-------ACC-G-C--------CA---GCCAC--------------
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 I 8
s Piliocolobus_badius.k141_1987485                           3111 39 -      5908 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------TACCAGCCAATACCTGTGGCAGTG
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       3729 39 -     17985 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------TACCAGCCAATACCTGTGGCAATG
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            3096 39 +      7694 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------TACCAGCCAATACCTGTGGCAATG
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26741580 39 +  26888534 a--------a-----a------t------g---------------a---aa--cca--a-A-------A-----C--------TACCAGCCAATACCTGTGGCAGTG
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pithecia_albicans.k141_991845                             44509 39 -     61926 A--------A-----A------T------G---------------G---AA--CCC--A-A-------A-----C--------CCCCAGTCAGTATCTGCAGCAGTG
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        25894 39 +     78826 A--------A-----A------T------G---------------G---AA--CCC--A-A-------A-----C--------CCCCAGTCAGTATCTGCAGCAGTG
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              9941 39 -     15800 A--------A-----A------T------G---------------G---AA--CCC--A-A-------A-----C--------CCCCAGTCAGTATCTGCAGCAGTG
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        13140 39 -     16101 A--------A-----A------T------G---------------G---AA--CCC--A-A-------A-----C--------CCCCAGTCAGTATCTGCAGCAGTG
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          6368 39 +      9673 A--------A-----A------T------G---------------G---AA--CCC--A-A-------A-----C--------CCCCAGTCAGTATCTGCAGCAGTG
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13475368 39 -  19735023 A--------A-----A------T------G---------------G---AA--CCC--A-A-------A-----C--------CCCCAGTCAGTATCTGCAGCAGTG
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           14271 39 -     31692 A--------A-----A------T------G---------------G---AA--CCC--A-A-------A-----C--------CCCCAGTCAGTATCTGCAGCAGTG
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           6040 25 +     21690 A--------A-----A------T------A---------------A---AA--CCA--A-A-------ACC-A-C--------CA---GCCAC--------------
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 I 8
s Plecturocebus_bernhardi.k141_959214                       23611 35 +     44506 C--------A-----A------T------G---------------A---AA--CCC--A-A-------A-----C--------CC----TCAGTATCTGCAGCAGTG
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        23823 35 +     67491 A--------A-----A------T------G---------------A---AA--CCC--A-A-------A-----C--------CC----TCAGTATCTGCAGCAGTG
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      14063 35 -     98129 A--------A-----A------T------G---------------A---AA--CCC--A-A-------A-----C--------CC----TCAGTATCTGCAGCAGTG
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     23663 35 +    147771 A--------A-----A------T------G---------------A---AA--CCC--A-A-------A-----C--------CC----TCAGTATCTGCAGCAGTG
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                          299 35 -     43940 A--------A-----A------T------G---------------A---AA--CCC--A-A-------A-----C--------CC----TCAGTATCTGCAGCAGTG
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          4382 35 -     55515 A--------A-----A------T------G---------------A---AA--CCC--A-A-------A-----C--------CC----TCAGTATCTGCAGCAGTG
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         23736 35 +    152463 C--------A-----A------T------G---------------A---AA--CCC--A-A-------A-----C--------CC----TCAGTATCTGCAGCAGTG
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       1453 35 -    119457 C--------A-----A------T------G---------------A---AA--CCC--A-A-------A-----C--------CC----TCAGTATCTGCAGCAGTG
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         13459 35 +    134592 C--------A-----A------T------G---------------A---AA--CCC--A-A-------A-----C--------CC----TCAGTATCTGCAGCAGTG
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          24046 35 -     75465 C--------A-----A------T------G---------------A---AA--CCC--A-A-------A-----C--------CC----TCAGTATCTGCAGCAGTG
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              188211 39 -    373494 a--------a-----a------t------g---------------a---aa--cca--a-A-------A-----C--------CACCAGTCAATATCTGTAGCAGTG
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19808859 39 +  19899266 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CACCAGTCAATATCTGTAGCAGTG
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               6861 39 -     15069 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CACCAGTCAATACCTGTGGCAGTG
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              6976 39 +     14865 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CACCAGTCAATACCTGTGGCAGTG
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Psammomys_obesus.NESX01026517.1                           36117 36 +     77221 a--------a-----a------t------a---------------a---aagcaa--aa-t-gacagtg-----t--------gt---gtgtgtgtg--------tg
i Psammomys_obesus.NESX01026517.1                       C 0 I 52
s Pteronotus_parnellii.KE867983.1                            4730 18 -     27784 --------------------------------------------------------------------ACC-A-G--------GA---GCCAATATT--------TA
i Pteronotus_parnellii.KE867983.1                       I 13 I 8
s Pteronura_brasiliensis.PteBra_flattened_line_1343        247333 31 -    344369 A--------A-----A------T------G---------------C---AA--CCA--A-A-------ATC-A-C--------CA---GCCAATAAC--------TA
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 I 8
s Pteropus_alecto.KB031157.1                             13246626 29 -  17261082 ---------------a------t------a---------------a---aa--gca--a-a-------acc-a-g--------CA---GCCAATATT--------TA
i Pteropus_alecto.KB031157.1                            C 0 I 8
s Pteropus_vampyrus.KN525959.1                             604577 29 -   3946241 ---------------a------t------a---------------a---aa--gca--a-a-------acc-a-g--------CA---GCCAATATA--------TA
i Pteropus_vampyrus.KN525959.1                          C 0 I 8
s Puma_concolor.QAVW01000427.1                          131535005 31 - 161321710 a--------a-----a------t------g---------------a---aa--ccg--A-A-------ATC-A-C--------CA---GCCAACATC--------AA
i Puma_concolor.QAVW01000427.1                          C 0 I 8
s Pygathrix_cinerea.k141_374971                             30964 39 +     56732 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CACCAGTCAATACCTGTGGCAGTG
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6807458 39 +   6970761 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CACCAGTCAATACCTGTGGCAGTG
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             6851 39 +     18040 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CACCAGTCAATACCTGTGGCAGTG
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                16428 25 +     68503 A--------A-----A------T------A---------------A---AA--GCA--A-A-------AAC-A-C--------CA---GCCAC--------------
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 I 8
s Rhinolophus_sinicus.LVEH01000179.1                      1788494 34 +   2252614 ---------------at-taaat------a---------------a---aa--gca--a-a-------act-a-c--------cA---GCCCATATT--------TA
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 I 8
s Rhinopithecus_bieti.k119_554384                            1248 39 -     17045 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CACCAGTCAATACCTGTGGCAGTG
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206378736 39 - 206558726 a--------a-----a------t------g---------------a---aa--cca--a-A-------A-----C--------CACCAGTCAATACCTGTGGCAGTG
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44857638 39 -  45163003 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CACCAGTCAATACCTGTGGCAGTG
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                19959 29 +    109198 ---------------A------T------A---------------A---AA--GCA--A-A-------ACC-A-A--------CA---GCCAATATT--------TA
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 I 8
s Saiga_tatarica.SaiTat_scaffold_82192                       8585 25 +     12214 A--------A-----A------T------A---------------A---AA--GCA--A-A-------AAC-A-C--------CA---GCCAC--------------
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 I 8
s Saimiri_boliviensis.NW_024100938.1                     15673468 39 -  43202129 a--------a-----a------t------g---------------a---aa--cca--a-A-------A-----C--------CCTCAGTCAATATCTGCATCAGTG
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        5381 39 +     34089 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CCTCAGTCAATATCTGCATCAGTG
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              5323 39 -     60842 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CCTCAGTCAATATCTGCATCAGTG
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              5416 39 +     67014 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CCTCAGTCAATATCTGCATCAGTG
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              5394 39 +     60816 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CCTCAGTCAATATCTGCATCAGTG
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 5331 39 -     76454 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CCTCAGTCAATATCTGCATCAGTG
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17342058 39 -  30362882 A--------A-----A------T------A---------------A---AA--CCA--A-A-------A-----C--------CCTCAGTCAATATCTGCAGCAGTG
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         21419 39 -     62485 A--------A-----A------T------A---------------A---AA--CCA--A-A-------A-----C--------CCTCAGTCAATATCTGCAGCAGTG
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   32921 31 -    114521 C--------T-----A------T------A---------------A---AA--TCA--A-A-------ACC-A-C--------CA---CCCAATATC--------TA
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 I 499
s Semnopithecus_entellus.k141_1572367                        4468 39 +     15331 A--------A-----A------C------G---------------A---AA--CCA--A-A-------A-----C--------CACCAGTCAATACCTGTGGCAGTG
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       9843 39 +     20762 A--------A-----A------C------G---------------A---AA--CCA--A-A-------A-----C--------CACCAGTCAATACCTGTGGCAGTG
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         119849 39 +    130994 A--------A-----A------C------G---------------A---AC--CCA--A-A-------A-----C--------CACCAGTCAATACCTGTGGCAGTG
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           38627 39 +     46263 A--------A-----A------C------G---------------A---AA--CCA--A-A-------A-----C--------CACCAGTCAATACCTGTGGCAGTG
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     31772 39 +     42640 A--------A-----A------C------G---------------A---AA--CCA--A-A-------A-----C--------CACCAGTCAATACCTGTGGCAGTG
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        14794 39 +     30600 A--------A-----A------C------G---------------A---AA--CCA--A-A-------A-----C--------CACCAGTCAATACCCGTGGCAGTG
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  100904 36 -    120886 A--------A-----A------T------A---------------A---AAC-TA-A-AAC-GCCAGTG-----C--------AT---ATGTGTGAG--------TG
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 I 37
s Solenodon_paradoxus.SolPar_flattened_line_1012            19522 31 +    739146 A--------A-----A------T------A---------------A---AA--GGA--A-A-------A-CTA-C--------CA---GGCAAGATC--------AC
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 I 8
s Sorex_araneus.JH798170.1                               17767106 19 -  27805282 ------------------------------------------------------------a-------acc-a-t--------CA---ACCAAAATC--------TA
i Sorex_araneus.JH798170.1                              I 6 I 6
s Spermophilus_dauricus.KZ294190.1                        2240410 20 +   2842873 -------------------------------------------------aa-acca-aa-t-------c-----c--------C-------AATGCC--------CA
i Spermophilus_dauricus.KZ294190.1                      I 1 I 8
s Spilogale_gracilis.SpiGra_flattened_line_905             235457 31 -    276980 A--------A-----A------T------G---------------T---AA--CCA--A-A-------ATC-A-C--------CA---ACCAATAAC--------TG
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 I 8
s Suricata_suricatta.SurSur_flattened_line_20339            28220 31 +     62062 A--------A-----A------T------G---------------A---AA--CCA--A-A-------ATC-A-C--------CA---GCCAATATC--------AA
i Suricata_suricatta.SurSur_flattened_line_20339        I 7 I 8
s Sus_scrofa.CM000824.4                                 189272738 25 + 218635234 a--------a-----a------g------a---------------a---aa--ctc--a-a-------TCC-A-C--------CA---GACAC--------------
i Sus_scrofa.CM000824.4                                 C 0 I 8
s Symphalangus_syndactylus.tarseq_24                        15968 39 -  13920577 A--------A-----A------T------G---------------A---AA--CCA--A-A-------A-----C--------CACCAGTCAATATCTGTAGCAGTG
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                 917 31 +     20549 A--------A-----A------T------C---------------A---AA--GCA--A-A-------ATA-A-T--------GA---GCCAATATT--------TA
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 I 5
s Tamandua_tetradactyla.TamTet_scaffold_26877               15334 41 +     45698 A--------A-----A------G------AAA-TAAAA-A---GAA---AA--ACA--A-A-------ACC-A-C--------CA---GCTATTATC--------TT
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 I 8
s Tapirus_indicus.TapInd_scaffold_176                      807767 31 +   1148477 A--------A-----A------T------A---------------A---AA--CCA--A-A-------ACC-A-C--------CA---GCCAATATC--------TA
i Tapirus_indicus.TapInd_scaffold_176                   C 0 I 8
s Tapirus_terrestris.TapTer_scaffold_14939                  58479 31 +     99546 A--------A-----A------T------A---------------A---AA--CCA--A-A-------ACC-A-C--------CA---GCCAATATC--------TA
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 I 8
s Tarsius_lariang.k141_609102                               27131 39 +     42269 A--------A-----G------T------A---------------A---AA--CCA--A-A-------A-----C--------CACCAGTCAGTGTCTGTAGCAGCA
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               60447 39 +     65473 A--------A-----G------T------A---------------A---AA--CCA--A-A-------A-----C--------CACCAGTCAGTGTCTGTAGCAGCA
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194008868 39 - 194193292 a--------a-----a------t------g---------------a---aa--cca--a-A-------A-----C--------CACCAGCCAATATCTGTGGCAGTG
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             39475 18 -     47444 C--------A-----A------T------A---------------A---AA-TCAA-GA-T-------A-----C--------C-----------------------
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 I 8
s Tolypeutes_matacus.TolMat_scaffold_269431                  6139 46 +      6782 A--------A-----A------T------AAACCAAAATAAAAGAA---AA--CCA--A-A-------ACC-A-C--------CA---GCTATTATC--------TT
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 I 8
s Tonatia_saurophila.TonSau_scaffold_3334                  136717 17 -    259118 --------------------------------------------------------------------ACC-A-A--------AA---G-CAACATT--------TA
i Tonatia_saurophila.TonSau_scaffold_3334               I 13 I 8
s Trachypithecus_auratus.k141_738098                        27953 39 +     38948 A--------A-----A------C------G---------------A---AA--CCA--A-A-------A-----C--------CACCAGTCAATACCTGTGGCAGTG
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   21675 39 -     32910 A--------A-----A------C------G---------------A---AA--CCA--A-A-------A-----C--------CACCAGTCAATACCTGTGGCAGTG
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      3087 39 -     12939 A--------A-----A------C------G---------------A---AA--CCA--A-A-------A-----C--------CACCAGTCAATACCTGTGGCAGTG
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       3005 39 -     14244 A--------A-----A------C------G---------------A---AA--CCA--A-A-------A-----C--------CACCAGTCAATACCTGTGGCAGTG
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           44402 39 -     54611 A--------A-----A------C------G---------------A---AA--CCA--A-A-------A-----C--------CACCAGTCAATACCTGTGGCAGTG
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        2199 39 -     11566 A--------A-----A------C------G---------------A---AA--CCA--A-A-------A-----C--------CACCAGTCAATACCTGTGGCAGTG
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     4382 39 -     15592 A--------A-----A------C------G---------------A---AA--CCA--A-A-------A-----C--------CACCAGTCAATACCTGTGGCAGTG
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          3034 39 +     14371 A--------A-----A------C------G---------------A---AA--CCA--A-A-------A-----C--------CACCAGTCAATACCTGTGGCAGTG
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   1321 39 +     12481 A--------A-----A------C------G---------------A---AA--CCA--A-A-------A-----C--------CACCAGTCAATACCTGTGGCAGTG
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        1195 39 -     24393 A--------A-----A------C------G---------------A---AA--CCA--A-A-------A-----C--------CACCAGTCAATACCTGTGGCAGTG
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       6445 39 -     28054 A--------A-----A------C------G---------------G---AA--CCA--A-A-------A-----C--------CACCAGTCAATACCTGTGGCAGTG
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44661229 39 -  44834318 A--------A-----A------C------G---------------A---AA--CCA--A-A-------A-----C--------CACCAGTCAATACCTGTGGCAGTG
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       3545 39 +     13828 A--------A-----A------C------G---------------A---AA--CCA--A-A-------A-----C--------CACCAGTCAATACCTGTGGCAGTG
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   5789 14 +     90398 A--------A-----A------T------A---------------A---AA--GCC--A-A-------A--------------------------------------
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 I 12
s Trichechus_manatus.JH594618.1                          16085978 31 +  31416278 a--------a-----a------t------a---------------a---aa--cca--a-a-------act-a-c--------cA---GCTAATATC--------GG
i Trichechus_manatus.JH594618.1                         C 0 I 8
s Tupaia_chinensis.KB320831.1                             2793971 12 -   3938065 ------------------------------------------------------------------------------------a---gCCAATATC--------TG
i Tupaia_chinensis.KB320831.1                           I 216 I 3
s Tupaia_tana.TupTan_flattened_line_68454                    6161 12 +     13056 ------------------------------------------------------------------------------------A---GCTAATATC--------TG
i Tupaia_tana.TupTan_flattened_line_68454               I 220 I 3
s Tursiops_truncatus.MRVK01000923.1                      69314065 25 -  96451834 a--------a-----a------t------a---------------a---aa--cca--a-a-------acc-g-c--------CA---GCCAC--------------
i Tursiops_truncatus.MRVK01000923.1                     C 0 I 8
s Uropsilus_gracilis.UroGra_scaffold_69449                   1975 13 +     10241 -----------------------------------------------------------------------------------CA---CCCAATATC--------TA
i Uropsilus_gracilis.UroGra_scaffold_69449              I 17 I 508
s Ursus_maritimus.KK498671.1                              6515453 30 +  28682327 a--------a-----a------t------g---------------a---aa--cca--a-a-------atC-A-C--------CA---GCTGATaac--------t-
i Ursus_maritimus.KK498671.1                            C 0 I 8
s Vicugna_pacos.KN269600.1                                1525316  8 -   2331223 --------------------------------------------------------------------------c--------ca---gcCAC--------------
i Vicugna_pacos.KN269600.1                              I 8 I 8
s Vulpes_lagopus.VulLag_flattened_line_2045                138947 31 -    281493 A--------A-----A------T------G---------------A---AA--CCA--A-A-------ATC-G-C--------CA---GCCTTTATC--------GA
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 I 8
s Xerus_inauris.XerIna_scaffold_7898                       127527 21 -    134049 -------------------------------------------------AA-ACTAAAA-C-------C-----C--------C-------AGTGCC--------TA
i Xerus_inauris.XerIna_scaffold_7898                    I 1 I 8
s Zalophus_californianus.ZalCal_flattened_line_4097        214928 31 -    227762 A--------A-----A------T------G---------------A---AA--CCA--A-A-------ATC-A-C--------CA---GCCAATAAC--------TA
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 I 8
s Zapus_hudsonius.ZapHud_scaffold_64392                     16472 29 -     20485 A--------C-----A------T------A---------------A---AAC-AA-A-A-C-------A-----T--------CA---GTCAATAGC--------CA
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 I 8
s Ziphius_cavirostris.ZipCav_flattened_line_127025           7564 25 -      8775 A--------A-----A------T------A---------------A---AA--CCA--A-A-------ACC-G-C--------CA---GCCAC--------------
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 I 8
e Macroglossus_sobrinus.MacSob_scaffold_879                701732 90 +    802869 I
e Procavia_capensis.ProCapCap_scaffold_149274                2467 1156 -      9567 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Microgale_talazaci.MicTal_scaffold_34660                  35557  0 -     48017 C
e Megaderma_lyra.MegLyr_scaffold_3562                       64783 239 -    234502 I
e Lasiurus_borealis.LasBor_scaffold_59542                    4392 78 +     26176 I
e Heterohyrax_brucei.HetBruBak_scaffold_25354               61360 1157 +     73687 I
e Elephantulus_edwardii.JH947210.1                        7816992 12417 +  15467074 I
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1008 325 -      5782 I
e Microtus_ochrogaster.CM001673.1                        22820341  4 -  98408828 I
e Varecia_variegata.k141_775891                             25501  3 -     33872 I
e Varecia_rubra.k141_432109                                  5966  3 -     20643 I
e Rattus_norvegicus.chr11                                13915860 1475 +  90463843 I
e Propithecus_verreauxi.k141_158021                         39953  3 -     48185 I
e Propithecus_tattersalli.k141_907138                       17689  3 -     53241 I
e Propithecus_perrieri.k141_7554                            18055  3 +     27322 I
e Propithecus_edwardsi.k141_1317105                         36132  3 -     44753 I
e Propithecus_diadema.k141_577245                           43745  3 +     52369 I
e Propithecus_coronatus.k141_1353159                         4402  3 +     11805 I
e Propithecus_coquerelli.NW_012147863.1                     19492  3 -     30946 I
e Prolemur_simus.MPIZ01000048.1                           6849325  3 +  12164890 I
e Perodicticus_potto.k141_713187                            25474  3 -     27972 I
e Perodicticus_ibeanus.k141_117958                           6160  3 -     23713 I
e Otolemur_garnettii.GL873528.1                          18009456  3 -  38779656 I
e Otolemur_crassicaudatus.k141_505435                        1475  3 -     53940 I
e Ondatra_zibethicus.OndZib_scaffold_6821                  125594  4 +    145789 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65670190  0 +  89412551 C
e Nycticebus_coucang.k141_2051882                            4581  0 +      6470 C
e Nycticebus_bengalensis.LG16                            65567855  0 -  95554990 C
e Nannospalax_galili.KL201303.1                            119159  6 +    362372 I
e Mus_spretus.CM004110.1                                 74333152 260 +  97876770 I
e Mus_pahari.LT608305.1                                  67556620 256 +  89017189 I
e Mus_musculus.chr16                                     75490417 259 +  98207768 I
e Mus_caroli.LT608236.1                                  70767340 259 +  92629107 I
e Mirza_zaza.k141_226143                                     6369  3 +      8497 I
e Microcebus_murinus.CM007691.1                          16510980  3 +  47401472 I
e Loris_tardigradus.ctg97                                 3779150  0 +   6799190 C
e Loris_lydekkerianus.k141_550999                           11401  0 +     84689 C
e Lepilemur_septentrionalis.k141_578524                     32347  3 -     33031 I
e Lepilemur_ruficaudatus.k141_617879                        79356  3 +    116806 I
e Lepilemur_dorsalis.k141_134267                            54094  3 +     63517 I
e Lepilemur_ankaranensis.k141_884009                        24708  3 +     39228 I
e Lemur_catta.scaffold_1                                258407958  3 - 285822530 I
e Indri_indri.k141_5141390                                   1122  3 -      3181 I
e Hapalemur_occidentalis.k141_797938                        46279  3 -     54384 I
e Hapalemur_meridionalis.k141_186231                        29651  3 -     42470 I
e Hapalemur_griseus.k141_1387522                             6402  3 +     56096 I
e Hapalemur_gilberti.k141_279011                             1076  3 -     11661 I
e Hapalemur_alaotrensis.k141_1280836                         2596  3 +     10286 I
e Graphiurus_murinus.GraMur_scaffold_4493                   77863  0 +    118900 C
e Galagoides_demidoff.k141_1769638                          11100  3 +     27357 I
e Galago_senegalensis.k141_964197                           14034  3 -     43889 I
e Galago_moholi.ctg555                                     211660  3 -    847004 I
e Eulemur_sanfordi.k141_186399                              16595  3 -     29447 I
e Eulemur_rufus.k141_1620292                                33869  3 +     46535 I
e Eulemur_rubriventer.k141_411740                           19131  3 +     26808 I
e Eulemur_mongoz.k141_825972                                16675  3 +     27497 I
e Eulemur_fulvus.k141_653297                                12015  3 +    109717 I
e Eulemur_flavifrons.k141_903901                             8537  3 +     60246 I
e Eulemur_coronatus.k141_3240342                            12216  3 +     36558 I
e Eulemur_collaris.k141_311830                               5742  3 -      6809 I
e Eulemur_albifrons.k141_715837                              5810  3 +     13586 I
e Ellobius_talpinus.LOJH01090055.1                           7151  4 -      7838 I
e Ellobius_lutescens.LOEQ01003611.1                        240029  1 -    369425 I
e Daubentonia_madagascariensis.ctg11                     16845635  3 +  31942871 I
e Cricetomys_gambianus.CriGam_scaffold_949                 279183 147 -    399297 I
e Cheirogaleus_medius.k141_133808                            8812  3 +     13308 I
e Cheirogaleus_major.k141_1157592                           59764  3 -     68416 I
e Avahi_peyrierasi.k141_798820                               1105  3 +      6337 I
e Avahi_laniger.k141_2840928                                 7489  3 -     16375 I
e Arctocebus_calabarensis.k141_587554                        1753  3 +      9265 I
e Nomascus_siki_b.tarseq_80                             25641 26 -  18771707 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               14654 84 +    209709 T---TATTGTTGGGGAGC-------------------ATGCACGTT-TGTTTGAGCTTACTTATATATACAGAGCTGTTTAGCTTAATCTTTAAATTGAAAATTTTT
s Acinonyx_jubatus.LLWD01000356.1                         2034684 27 +   3721120 T---TGTTTTCACAGAGC-------------------ATGTACATT-TGT---------------------------------------------------------
i Acinonyx_jubatus.LLWD01000356.1                       I 8 I 144
s Acomys_cahirinus.AcoCah_scaffold_1625                    113454 27 -    189883 T---TGTTGATATGGAAT-------------------TTACACCTT-CTC---------------------------------------------------------
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 26 I 121
s Ailuropoda_melanoleuca.LNAT01000321.1                  10658004 27 +  23371972 T---TTTTTTCACAGAGC-------------------GTGTACATT-TGT---------------------------------------------------------
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 8 I 144
s Ailurus_fulgens.LNAC01000003.1                          7095357 27 -  16596857 T---TGTTTTCACAGAGC-------------------ATGTACGTT-Ggt---------------------------------------------------------
i Ailurus_fulgens.LNAC01000003.1                        I 8 I 143
s Allactaga_bullata.AllBul_scaffold_70162                   17599 27 -     22067 T---TTTTGTCACAGAAA-------------------AGAGACATT-CGC---------------------------------------------------------
i Allactaga_bullata.AllBul_scaffold_70162               I 8 I 147
s Allenopithecus_nigroviridis.k141_2469532                   2385 79 -     60446 T---TATTGTTGGGGAGC-------------------ATGCCCATT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTTAAATTGAAAATTTTT
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         3102 79 -     29318 T---TATTGTTGGGGAGC-------------------ATGCTCACT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTTAAATTGAAAATTTTT
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         2038 79 +     38766 T---TATTGTTGGGGAGC-------------------ATGCTCACT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTTAAATTGAAAATTTTT
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          2996 79 -     80423 T---TATTGTTGGGGAGC-------------------ATGCTCACT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTTAAATTGAAAATTTTT
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            10962 84 -     18050 T---CATTGTTGGGGAGC-------------------ATGCACATT-TGTTTGAACTTATTTATACACACAGAGTTGTTTAGCTTAATATTTAAATTGAAAATTTTT
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_1710068                                678 84 +      1555 T---CATTGTTGGGGAGC-------------------ATGCACATT-TGTTTGAACTTATTTATACACACAGAGTTGTTTAGCTTAATATTTAAATTGAAAATTTTT
i Alouatta_caraya.k141_1710068                          C 0 C 0
s Alouatta_discolor.k141_811576                             11635 84 -     21359 T---CATTGTTGGGGAGC-------------------ATGCACATT-TGTTTGAACTTATTTATACACACAGAGTTGTTTAGCTTAATATTTAAATTGAAAATTTTT
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                1258 84 +      2129 T---CATTGTTGGGGAGC-------------------ATGCACATT-TGTTTGAACTTATTTATACACACAGAGTTGTTTAGCTTAATATTTAAATTGAAAATTTTT
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_2177643                           642 84 -      1868 T---CATTGTTGGGGAGC-------------------ATGCACATT-TGTTTGAACTTATTTATACACACAGAGTTGTTTAGCTTAATATTTAAATTGAAAATTTTT
i Alouatta_macconnelli.k141_2177643                     C 0 C 0
s Alouatta_nigerrima.k141_3537692                             691 84 +      1660 T---CATTGTTGGGGAGC-------------------ATGCACATT-TGTTTGAACTTATTTATACACACAGAGTTGTTTAGCTTAATATTTAAATTGAAAATTTTT
i Alouatta_nigerrima.k141_3537692                       C 0 C 0
s Alouatta_palliata.k141_2764429                              604 84 -      1480 T---CATTGTTGGGGAGC-------------------ATGCACATT-TGTTTGAACTTATTTATACACACAGAGTTGTTTAGCTTAATATTTAAATTGAAAATTTTT
i Alouatta_palliata.k141_2764429                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            4684 84 -      4927 T---CATTGTTGGGGAGC-------------------ATGCACATT-TGTTTGAACTTATTTATACACACAGAGTTGTTTAGCTTAATATTTAAATTGAAAATTTTT
i Alouatta_puruensis.k141_1284840                       C 0 C 0
s Alouatta_seniculus.k141_1531728                             819 84 -      1692 T---CATTGTTGGGGAGC-------------------ATGCACATT-TGTTTGAACTTATTTATACACACAGAGTTGTTTAGCTTAATATTTAAATTGAAAATTTTT
i Alouatta_seniculus.k141_1531728                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3520792 27 +   4113121 T---TGTTGTCACCTATt-------------------atgtacatt-tat---------------------------------------------------------
i Ammotragus_lervia.NIVO01013474.1                      I 8 I 152
s Anoura_caudifer.AnoCau_scaffold_422                      391197 24 -    631301 T---T---GTCACAGAGC-------------------ACACACAT-TTGT---------------------------------------------------------
i Anoura_caudifer.AnoCau_scaffold_422                   I 8 I 148
s Antilocapra_americana.AntAmePen_scaffold_42841            31373 27 +     33004 T---TGTTGTCACCTATT-------------------AAGTACATT-TAT---------------------------------------------------------
i Antilocapra_americana.AntAmePen_scaffold_42841        I 8 I 152
s Aotus_azarae.k141_3170768                                 63314 82 +     78111 T---TATTATTGGGGAGC-------------------ATGCACATT-TGTTTGAACTTATTTATATATACAAAGTTGTTTAGCTTAATATTTAAATTGAAAATTT--
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            6256 82 +     22701 T---TATTATTGGGGAGC-------------------ATGCACATT-TGTTTGAACTTATTTATATATACAAAGTTGCTTAGCTTAATATTTAAATTGAAAATTT--
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5750213 82 +   9889416 T---TATTATTGGGGAGC-------------------ATGCACATT-TGTTTGaacttatttatatatacaaagttGTTTAGcttaatatttaaattgaaaattt--
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             6802 82 -    104377 T---TATTATTGGGGAGC-------------------ATGCACATT-TGTTTGAACTTATTTATATATACAAAGTGGTTTAGTTTAATATTTACATTGAAAATTT--
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               6804 82 +     23246 T---TATTATTGGGGAGC-------------------ATGCACATT-TGTTTGAACTTATTTATATATACAAAGTGGTTTAGTTTAATATTTACATTGAAAATTT--
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     4347 24 +      5067 T---TGG---CACATAGC-------------------ATGCACCTT-TAT---------------------------------------------------------
i Aplodontia_rufa.AprRuf_scaffold_156013                I 8 I 140
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 9617 24 -     29036 T---T---GTCACAGAGC-------------------ATGCACAT-TTGT---------------------------------------------------------
i Artibeus_jamaicensis.ArtJam_scaffold_41619            I 8 I 145
s Ateles_geoffroyi_b.tarseq_2582                             9540073 84 +  39197703 T---TATTGTTGGGGAGC-------------------ATGTACGTT-TGTTTGAACTTATTTATGTATACAGAGTTGTTTAGCTTAATGTTTAAATTGAAAATTTTT
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             61344 84 +     85812 T---TATTGTTGGGGAGC-------------------ATGTACGTT-TGTTTGAACTTATTTATGTATACAGAGTTGTTTAGCTTAATGTTTAAATTGAAAATTTTT
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                12357 84 +     89302 T---TATTGTTGGGGAGC-------------------ATGTACGTT-TGTTTGAACTTATTTATGTATACAGAGTTGTTTAGCTTAATGTTTAAATTGAAAATTTTT
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             16860 84 -     58268 T---TATTGTTGGGGAGC-------------------ATGTACGTT-TGTTTGAACTTATTTATGTATACAGAGTTGTTTAGCTTAATGTTTAAATTGAAAATTTTT
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             64852 84 +    119057 T---TATTGTTGGGGAGC-------------------ATGTACGTT-TGTTTGAACTTATTTATGTATACAGAGTTGTTTAGCTTAATGTTTAAATTGAAAATTTTT
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               6823 84 -     25888 T---TATTGTTGGGGAGC-------------------ATGTACGTT-TGTTTGAACTTATTTATGTATACAGAGTTGTTTAGCTTAATGTTTAAATTGAAAATTTTT
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26380871 27 +  51448160 C---TGTTGTCATGGAGC-------------------ATGTACATT-TGC---------------------------------------------------------
i Balaenoptera_acutorostrata.KI537095.1                 I 8 I 131
s Balaenoptera_bonaerensis.DF502048.1                        6043 27 -     13118 C---TGTTGTCATGGAGC-------------------ATGTACATT-TGC---------------------------------------------------------
i Balaenoptera_bonaerensis.DF502048.1                   I 8 I 131
s Beatragus_hunteri.BeaHun_scaffold_21644                   43902 27 -     72089 T---TGTTGTCACCTATT-------------------ATGTACATT-TAT---------------------------------------------------------
i Beatragus_hunteri.BeaHun_scaffold_21644               I 8 I 148
s Bison_bison.KN264915.1                                  6560518 27 +   6870073 T---TGCTGTCACCTAGT-------------------ATGTACATT-TAT---------------------------------------------------------
i Bison_bison.KN264915.1                                I 8 I 150
s Bos_indicus.CM003021.1                                138140633 27 - 161108492 T---TGTTGTCACCTAGT-------------------ATGTACatt-tat---------------------------------------------------------
i Bos_indicus.CM003021.1                                I 8 I 150
s Bos_mutus.JH883513.1                                     573174 27 -    998990 T---TGTTGTCACCTAGT-------------------ATGTACatt-tat---------------------------------------------------------
i Bos_mutus.JH883513.1                                  I 8 I 150
s Bos_taurus.CM000177.6                                 136296366 27 - 158972876 T---TGTTGTCACCTAGT-------------------ATGTACAtt-tat---------------------------------------------------------
i Bos_taurus.CM000177.6                                 I 8 I 150
s Bubalus_bubalis.KI419065.1                              1233446 27 -   1914593 T---TGTTGTTACCTAGA-------------------ATGTACATT-TAT---------------------------------------------------------
i Bubalus_bubalis.KI419065.1                            I 8 I 152
s Cacajao_ayresi.k141_724503                               114710 84 -    171031 T---TATTGTTGGGGAGC-------------------ATGCACATT-TGTTTGAACTTATTTATATATACAGAGTTGTTTAGCTTAATATTTAAATTGAAAATTTTT
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 13739 84 +    125063 T---TATTGTTGGGGAGC-------------------ATGCACATT-TGTTTGAACTTATTTATATATACAGAGTTGTTTAGCTTAATATTTAAATTGAAAATTTTT
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                15782 84 -    216513 T---TATTGTTGGGGAGC-------------------ATGCACATT-TGTTTGAACTTATTTATATATACAGAGTTGTTTAGCTTAATATTTAAATTGAAAATTTTT
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        8325 84 -    134917 T---TATTGTTGGGGAGC-------------------ATGCACATT-TGTTTGAACTTATTTATATATACAGAGTTGTTTAGCTTAATATTTAAATTGAAAATTTTT
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3220228 23 -   8989139 C---TGTTGTCACAGAgc-------------------att----tt-tgt---------------------------------------------------------
i Camelus_bactrianus.KN276303.1                         I 8 I 134
s Camelus_dromedarius.KN271192.1                           397929 23 -  15254737 C---TGTTGTCACAGAgc-------------------att----tt-tgt---------------------------------------------------------
i Camelus_dromedarius.KN271192.1                        I 8 I 134
s Camelus_ferus.KB016973.1                                2973665 23 +   6889770 C---TGTTGTCACAGAgc-------------------att----tt-tgt---------------------------------------------------------
i Camelus_ferus.KB016973.1                              I 8 I 134
s CanFam4.chr31                                          11520148 27 +  39901454 T---TGTTTCCACAGTGC-------------------ATGTGCATT-TGT---------------------------------------------------------
i CanFam4.chr31                                         I 8 I 145
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   15174 27 +     87036 T---TGTTTCCACAGTGC-------------------ATGTGCATT-TGT---------------------------------------------------------
i Canis_lupus_VD.CanFam_VD_scaffold_16982               I 8 I 144
s Canis_lupus_dingo.QKWQ01001993.1                       11266815 27 -  35597290 T---TGTTTCCACAGTGC-------------------ATGTGCATT-TGt---------------------------------------------------------
i Canis_lupus_dingo.QKWQ01001993.1                      I 8 I 145
s Canis_lupus_familiaris.chr31                           11089349 27 +  39895921 T---TGTTTCCACAGTGC-------------------ATGTGCATT-TGt---------------------------------------------------------
i Canis_lupus_familiaris.chr31                          I 8 I 145
s Canis_lupus_orion.HG994411.1                           16456364 27 -  44759192 T---TGTTTCCACAGTGC-------------------ATGTGCATT-TGT---------------------------------------------------------
i Canis_lupus_orion.HG994411.1                          I 8 I 144
s Capra_aegagrus.CM003214.1                              21325867 27 + 157394656 T---TGTTGTCACCTATt-------------------atgtacatt-tat---------------------------------------------------------
i Capra_aegagrus.CM003214.1                             I 8 I 152
s Capra_hircus.CM004562.1                               135707095 27 - 157403528 T---TGTTGTCACCTATT-------------------ATGTACATT-TAT---------------------------------------------------------
i Capra_hircus.CM004562.1                               I 8 I 152
s Carlito_syrichta.NW_007248099.1                          309718 46 +    345090 T---TATTGTCATGGAGC-------------------ATGTATATT-TGTACAAGTTTA---ACATGTGCAG-----------------------------------
i Carlito_syrichta.NW_007248099.1                       C 0 I 3411
s Carollia_perspicillata.CarPer_scaffold_4436               60404 24 +     67245 T---T---GTCACAGAGC-------------------ATGCACAT-TTGT---------------------------------------------------------
i Carollia_perspicillata.CarPer_scaffold_4436           I 8 I 148
s Castor_canadensis.CasCan_scaffold_47037                   31765 25 +     33760 -----ATTGTGGCAGGGC-------------------ATACAACAT-TGT---------------------------------------------------------
i Castor_canadensis.CasCan_scaffold_47037               I 1 I 150
s Catagonus_wagneri.CatWag_scaffold_1305                   159544 27 -    276539 T---TATTTTCATGGAGT-------------------GTGTACATT-TGC---------------------------------------------------------
i Catagonus_wagneri.CatWag_scaffold_1305                I 8 I 139
s Cavia_aperea.AVPZ01000278.1                            15787306 20 -  24422027 T----------GTAAAAC-------------------ATGTATATT-TGT---------------------------------------------------------
i Cavia_aperea.AVPZ01000278.1                           I 8 I 288
s Cavia_porcellus.DS562889.1                             15799242 20 -  24440124 T----------GTAAAAC-------------------ATGTATATT-TGT---------------------------------------------------------
i Cavia_porcellus.DS562889.1                            I 8 I 290
s Cavia_tschudii.CavTsc_scaffold_488                       177433 20 +    436027 T----------GTAAAAC-------------------ATGTATATT-TGT---------------------------------------------------------
i Cavia_tschudii.CavTsc_scaffold_488                    I 8 I 271
s Cebus_albifrons.Contig22                               18891552 82 -  29618158 T---TATTGTTGGGGAGC-------------------ATGCACATT-TGTTTGAACTTATTTGTACATACAGAGTTGTTTAGCTTAATATTTAAATTGAAAATTT--
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 9096 82 -     26817 T---TATTGTTGGGGAGC-------------------ATGCACATT-TGTTTGAACTTATTTGTACATACAGAGTTGTTTAGCTTAATATTTAAATTGAAAATTT--
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                13339 82 +     25043 T---TATTGTTGGGGAGC-------------------ATGCACATT-TGTTTCAACTTATTTGTACATACAGAGTTGTTTAGCTTAATATTTAAATTGAAAATTT--
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                         8742 46 +     21754 T---TATTGTCATGGAGC-------------------ATGTATATT-TGTACAAGTTTA---ACATGTGCAG-----------------------------------
i Cephalopachus_bancanus.k141_702587                    C 0 I 3391
s Ceratotherium_simum.JH767818.1                          4364568 27 +   7569818 T---TATTGTCACAGAGC-------------------AAGTACATT-TGT---------------------------------------------------------
i Ceratotherium_simum.JH767818.1                        I 8 I 148
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         4325 27 -      9338 T---TATTGTCACAGAGC-------------------AAGTACATT-TGT---------------------------------------------------------
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    I 8 I 148
s Cercocebus_atys.KQ010443.1                              6556332 79 +   6739814 T---TATTGTTGGGGAGC-------------------ATGCCCATT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTcatatttaaattgaaaattttt
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      27806 79 +     60454 T---TATTGTTGGGGAGC-------------------ATGCCCATT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTTAAATTGAAAATTTTT
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          3013 79 -     21101 T---TATTGTTGGGGAGC-------------------ATGCCCATT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTTAAATTGAAAATTTTT
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         60323 79 -    107033 T---TATTGTTGGGGAGC-------------------ATGCCCATT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTTAAATTGAAAATTTTT
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        3202 79 -     17608 T---TATTGTTGGGGAGC-------------------ATGCCCATT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTTAAATTGAAAATTTTT
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                           361 79 +     45019 T---TATTGTTGGGGAGC-------------------ATGCCCATT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTTAAATTGAAAATTTTT
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                            445 79 +     15177 T---TATTGTTGGGGAGC-------------------ATGCCCATT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTTAAATTGAAAATTTTT
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          3245 79 +     16677 T---TATTGTTGGGGAGC-------------------ATGCCCATT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTTAAATTGAAAATTTTT
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           25414 79 +     35983 T---TATTGTTGGGGAGC-------------------ATGCCCATT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTTAAATTGAAAATTTTT
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11991943 79 +  12117833 T---TATTGTTGGGGAGC-------------------ATGCCCATT-TGTTTGAGCTTATTTAT-----CCGAGTTGTTTAGTTTCATATTTAAATTGAAAATTTTT
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46478700 79 +  46592721 T---TATTGTTGGGGAGC-------------------ATGCCCATT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTTAAATTGAAAATTTTT
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      42255 79 -     45581 T---TATTGTTGGGGAGC-------------------ATGCCCATT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTTAAATTGAAAATTTTT
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       3257 79 +     35577 T---TATTGTTGGGGAGC-------------------ATGCCCATT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTTAAATTGAAAATTTTT
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        3030 79 -     25661 T---TATTGTTGGGGAGC-------------------ATGCCCATT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTTAAATTGAAAATTTTT
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        3010 79 -     17744 T---TATTGTTGGGGAGC-------------------ATGCCCATT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTTAAATTGAAAATTTTT
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        22615 79 +     37128 T---TATTGTTGGGGAGC-------------------ATGCCCATT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTTAAATTGAAAATTTTT
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           3456 27 -      6963 G---GGTTGTCACAGGGC-------------------ACGTACAGA-TAT---------------------------------------------------------
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      I 8 I 145
s Cheracebus_lucifer.k141_619653                             6367 84 -     18223 T---TATTGTTGGGGAGC-------------------ATGCACATT-TGTTTGAACTTATTTATATATACAGAGTTGTTTAGCTTAATATTTAAATTGAAAATTTTT
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             23385 84 +     25473 T---TATTGTTGGGGAGC-------------------ATGCACATT-TGTTTGAACTTATTTATATATACAGAGTTGTTTAGCTTAATATTTAAATTGAAAATTTTT
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           42425 84 +     57117 T---TATTGTTGGGGAGC-------------------ATGCACATT-TGTTTGAACTTATTTATATATACAGAGTTGTTTAGCTTAATATTTAAATTGAAAATTTTT
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          47104 84 +     54541 T---TATTGTTGGGGAGC-------------------ATGCACATT-TGTTTGAACTTATTTATATATACAGAGTTGTTTAGCTTAATATTTAAATTGAAAATTTTT
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15962394 27 +  43084221 T---TGTGGTTGTCGAGC-------------------ATGTATATT-TGT---------------------------------------------------------
i Chinchilla_lanigera.JH721867.1                        I 7 I 137
s Chiropotes_israelita.k141_1189915                         71911 82 +    196370 T---TATTGTTGGGGAGC-------------------ATGCACATT-TGTTTGAACTTATTTATATACACAGAGTTGTTTAGCTTAATATTTAAATTGAAAA--TTT
i Chiropotes_israelita.k141_1189915                     C 0 I 2
s Chiropotes_sagulatus.k141_773804                          16091 82 +     40510 T---TATTGTTGGGGAGC-------------------ATGCACATT-TGTTTGAACTTATTTATATACACAGAGTTGTTTAGCTTAATATTTAAATTGAAAA--TTT
i Chiropotes_sagulatus.k141_773804                      C 0 I 2
s Chlorocebus_aethiops.ctg22                             15140612 79 -  15256731 T---TATTGTTGGGGAGC-------------------ATGCCCATT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTTAAATTGAAAATTTTT
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      35221 79 -     53260 T---TATTGTTGGGGAGC-------------------ATGCCCATT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTTAAATTGAAAATTTTG
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101145780 79 + 101219884 T---TATTGTTGGGGAGC-------------------ATGCCCATT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTcatatttaaattgaaaattttt
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                17156 26 -     21363 T---GGTTGTCA-GGGAC-------------------ACACACAGA-TGT---------------------------------------------------------
i Choloepus_didactylus.ChoDid_scaffold_36182            I 8 I 156
s Choloepus_hoffmanni.KN194586.1                           762461 26 +    964067 T---GGTTGTTA-GGGAC-------------------ACACACAGA-TGT---------------------------------------------------------
i Choloepus_hoffmanni.KN194586.1                        I 8 I 156
s Colobus_guereza.LG08                                  147665701 79 + 156195979 T---TATTGTTGGGGAGC-------------------ATGCCCGTT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTTAAATTGAAAATTTTT
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            17684 79 +     23629 T---TATTGTTGGGGAGC-------------------ATGCCTGTT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTTATATTGAAAATTTTT
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60615031 27 +  78930452 C---TGTTGTCACAGAGA-------------------GTGTTCATT-TGT---------------------------------------------------------
i Condylura_cristata.JH655880.1                         I 770 I 5327
s Cricetulus_griseus.LT883672.1                          53029952 27 +  72327488 C---TCTTGATATAGATC-------------------TTACACATT-GGC---------------------------------------------------------
i Cricetulus_griseus.LT883672.1                         I 68 I 121
s Crocidura_indochinensis.CroInd_scaffold_848148              218 27 +      1327 A---TATTCTTACGATGT-------------------CTGTTTGCT-TGT---------------------------------------------------------
i Crocidura_indochinensis.CroInd_scaffold_848148        I 8 I 143
s Cryptoprocta_ferox.CryFer_flattened_line_19014            52706 27 -     70449 T---TGTTTTCACAGAGC-------------------ATGTCCATT-TGT---------------------------------------------------------
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 8 I 145
s Ctenodactylus_gundi.CteGun_scaffold_447                  209104 27 -    956709 C---TGTGACTATGCAGC-------------------TTGAACATT-TGT---------------------------------------------------------
i Ctenodactylus_gundi.CteGun_scaffold_447               I 8 I 166
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 31737 15 -     67205 ---------------AGC-------------------AAATACTTC-TGT---------------------------------------------------------
i Ctenomys_sociabilis.CteSoc_scaffold_19489             I 4 I 154
s Cuniculus_paca.CunPac_flattened_line_16637                18435 27 +     26546 C---TGTGGTTGTGGAAC-------------------ATATATACT-TGT---------------------------------------------------------
i Cuniculus_paca.CunPac_flattened_line_16637            I 8 I 277
s Dasyprocta_punctata.DasPun_flattened_line_634             59526 27 -    236241 T---TGTGGTTGTGCAAT-------------------GGGTATATT-TGT---------------------------------------------------------
i Dasyprocta_punctata.DasPun_flattened_line_634         I 8 I 276
s Dasypus_novemcinctus.JH568778.1                          184317 19 -   6883506 -----------ACAGCTT-------------------GTATAGAGA-TGT---------------------------------------------------------
i Dasypus_novemcinctus.JH568778.1                       C 0 I 138
s Delphinapterus_leucas.KZ290064.1                       80037495 27 -  96802777 T---TGTTGTCATGGAGC-------------------ATGTACATT-TGC---------------------------------------------------------
i Delphinapterus_leucas.KZ290064.1                      I 8 I 137
s Desmodus_rotundus.KZ672188.1                           18699689 23 -  18957592 T---T---GTCACAGAGC-------------------ACGCGCAT--TGt---------------------------------------------------------
i Desmodus_rotundus.KZ672188.1                          I 8 I 150
s Dicerorhinus_sumatrensis.PEKH010003161.1                 323220 27 +    993696 T---TATTGTCACAGAGC-------------------AAGTACATT-TGT---------------------------------------------------------
i Dicerorhinus_sumatrensis.PEKH010003161.1              I 8 I 148
s Diceros_bicornis.DicBicMic_scaffold_9545                   3872 27 +    151128 T---TATTGTCACAGAGC-------------------AAGTACATT-TGT---------------------------------------------------------
i Diceros_bicornis.DicBicMic_scaffold_9545              I 8 I 148
s Dinomys_branickii.DinBra_scaffold_1996                   157663 27 +    228994 T---TGTGGTTGTGGAAC-------------------ATGTATATT-TGT---------------------------------------------------------
i Dinomys_branickii.DinBra_scaffold_1996                I 8 I 69
s Dipodomys_ordii.KN672545.1                              3657040 27 +   4240102 A---TGTTGTAGCAGAGT-------------------GTACACATT-TGT---------------------------------------------------------
i Dipodomys_ordii.KN672545.1                            I 19 I 144
s Dipodomys_stephensi.DipSte_scaffold_44365                 28683 27 +     28912 A---TGTTGTAGCAGAGT-------------------GTACACATT-TGT---------------------------------------------------------
i Dipodomys_stephensi.DipSte_scaffold_44365             I 19 I 144
s Dolichotis_patagonum.DolPat_scaffold_14102                36752 20 -     73477 T----------GTGGAAC-------------------ATGTATATT-TGT---------------------------------------------------------
i Dolichotis_patagonum.DolPat_scaffold_14102            I 8 I 276
s Echinops_telfairi.JH980316.1                           22999600 22 -  44670279 G---GGTTG-----GAAC-------------------ATATACCTA-TGT---------------------------------------------------------
i Echinops_telfairi.JH980316.1                          I 11 I 301
s Eidolon_helvum.KE772537.1                                 12931 27 +     24177 T---TGTTGTCATGGAGA-------------------AGGCACGTT-TGT---------------------------------------------------------
i Eidolon_helvum.KE772537.1                             I 8 I 144
s Elaphurus_davidianus.JRFZ01086400.1                     1492132 27 +   1727528 T---TGTTGTCAcctatt-------------------atgtatatt-tat---------------------------------------------------------
i Elaphurus_davidianus.JRFZ01086400.1                   I 8 I 152
s Elephantulus_edwardii.JH947210.1                        7829409  9 +  15467074 ----------------------------------------taCTTA-TAT---------------------------------------------------------
i Elephantulus_edwardii.JH947210.1                      I 12417 I 153
s Ellobius_lutescens.LOEQ01003611.1                        240030 32 -    369425 C---TATAGACAAAGATC---GAGAG-A----------TACACATC-GGC---------------------------------------------------------
i Ellobius_lutescens.LOEQ01003611.1                     I 1 I 122
s Ellobius_talpinus.LOJH01090055.1                           7155 32 -      7838 C---TATAGGTAAAGAGC-CAGAG---A----------TACACATC-GGC---------------------------------------------------------
i Ellobius_talpinus.LOJH01090055.1                      I 4 I 122
s Enhydra_lutris.KZ291749.1                              85872881 27 +  99434291 T---TGTTTTCACAGGGC-------------------ATGTACATT-GGT---------------------------------------------------------
i Enhydra_lutris.KZ291749.1                             I 8 I 144
s Eptesicus_fuscus.JH977687.1                             4707626 23 +   6522550 T---T---GTCATGGAGC-------------------AAACACAT--TGT---------------------------------------------------------
i Eptesicus_fuscus.JH977687.1                           I 8 I 150
s Equus_asinus.JREZ01000062.1                             5853660 27 -   7175178 T---TATCGTCACAGAGC-------------------ACATACGTT-TAT---------------------------------------------------------
i Equus_asinus.JREZ01000062.1                           I 8 I 356
s Equus_caballus.CM000402.2                              13352165 27 +  41866177 T---TATCGTCACAGAGC-------------------ACATACGtt-tat---------------------------------------------------------
i Equus_caballus.CM000402.2                             I 8 I 351
s Equus_przewalskii.ATBW01073585.1                          13654 27 +     92910 T---TATCGTCACAGAGC-------------------ACATACGtt-tat---------------------------------------------------------
i Equus_przewalskii.ATBW01073585.1                      I 8 I 352
s Erinaceus_europaeus.JH835290.1                         11534939 25 +  16010500 C---TATTGTCACAAAAC-------------------A--TTAATT-TGT---------------------------------------------------------
i Erinaceus_europaeus.JH835290.1                        I 8 N 0
s Erythrocebus_patas.Contig8                             48777791 79 -  48907691 T---TATTGTTGGGGAGC-------------------ATGCCCATT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTTAAATTGAAAATTTTT
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          315711 27 +    330699 C---TGTTGTAATGGAGC-------------------ATGTACATT-TGC---------------------------------------------------------
i Eschrichtius_robustus.EscRob_flattened_line_685       I 8 I 131
s Eubalaena_japonica.EubJap_flattened_line_7756             62164 27 +     89355 C---TGTTGTCATGGAGC-------------------ATGTACATT-TGC---------------------------------------------------------
i Eubalaena_japonica.EubJap_flattened_line_7756         I 8 I 134
s Felis_catus.CM001386.2                                129893656 27 - 159252932 T---TGTTTTCACAGAGC-------------------ATGTACATT-TGT---------------------------------------------------------
i Felis_catus.CM001386.2                                I 8 I 144
s Felis_catus_fca126.CM031420.1                         129280740 27 - 158578461 T---TGTTTTCACAGAGC-------------------ATGTACATT-TGT---------------------------------------------------------
i Felis_catus_fca126.CM031420.1                         I 8 I 144
s Felis_nigripes.FelNig_flattened_line_8080                 21880 27 +     52776 T---TGTTTTCACAGAGC-------------------ATGTACATT-TGT---------------------------------------------------------
i Felis_nigripes.FelNig_flattened_line_8080             I 8 I 144
s Fukomys_damarensis.KN123630.1                          13892139 10 -  19261668 ---------------------------------------ATATAAC-TAT---------------------------------------------------------
i Fukomys_damarensis.KN123630.1                         I 6 I 71
s Galeopterus_variegatus.GalVar_scaffold_354               156980 27 +    324696 T---TGTTGCCATGGAGC-------------------ATGTACATT-TAT---------------------------------------------------------
i Galeopterus_variegatus.GalVar_scaffold_354            I 8 I 139
s Giraffa_tippelskirchi.LVKQ01S012154.1                    181910 26 -    189561 T---TGTTGTCACctatt-------------------atgtacata-ta----------------------------------------------------------
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 8 I 151
s Glis_glis.GliGli_scaffold_79770                           14439 24 -     18683 C---TAT---TGTGAGGC-------------------ATAAACATT-TAT---------------------------------------------------------
i Glis_glis.GliGli_scaffold_79770                       I 8 I 152
s Gorilla_beringei.k141_111300                               6364 84 -     14630 T---TATTGTTGGGGAGC-------------------ATGCACATT-TGTTTGAGCTTATTTATATATACAGAGCTGTTTAGCTTAATATTTAAATCGAAAATTTTT
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119653464 84 - 195582420 T---TATTGTTGGGGAGC-------------------ATGCACATT-TGTTTGAGCTTATTTATATATACAGAGCTGTTTAGCTTAATATTTAAATCgaaaattttt
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   77863 22 +    118900 -----GT---TGTGAAGC-------------------ATGCACATT-TAT---------------------------------------------------------
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 I 146
s Helogale_parvula.HelPar_flattened_line_22962              17904 27 +     53719 T---TGTTTTCAGACCAC-------------------ATGTCCATT-TGT---------------------------------------------------------
i Helogale_parvula.HelPar_flattened_line_22962          I 8 I 144
s Hemitragus_hylocrius.HemHyl_scaffold_16669                28152 27 -     91191 T---TGTTGTCACCTATT-------------------ATGTACATT-TAT---------------------------------------------------------
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 8 I 152
s Heterocephalus_glaber.JH602058.1                        2551756 27 +  31725842 T---TGTTGTTATAGAAC-------------------ATGTATAAT-TGT---------------------------------------------------------
i Heterocephalus_glaber.JH602058.1                      I 7 I 155
s Hippopotamus_amphibius.HipAmp_scaffold_1308              147795 27 +    277961 T---TGTCGTCACGGAGC-------------------ATGAACATT-TGT---------------------------------------------------------
i Hippopotamus_amphibius.HipAmp_scaffold_1308           I 8 I 141
s Hipposideros_armiger.JXIK01001085.1                      279082 27 -    477199 T---TGTTGTCACGGAAT-------------------GTGCATATT-TCT---------------------------------------------------------
i Hipposideros_armiger.JXIK01001085.1                   I 8 I 148
s Hipposideros_galeritus.HipGal_scaffold_345408                83 27 -       919 T---TGTTGTCACAGAAT-------------------GTGCATATT-TCT---------------------------------------------------------
i Hipposideros_galeritus.HipGal_scaffold_345408         I 8 I 148
s Hoolock_leuconedys.ctg79                                      6057 84 -   7690867 T---TATTGTTGGGGAGC-------------------GTGCATGTT-TGTTTGAGCTTATTTATATATACAGAGCTGTTTAGCTTAATATTTAAATTGAAAATTTTT
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 17980 27 -     67322 T---TATTTTCACAGAGT-------------------ATGTACATT-TGT---------------------------------------------------------
i Hyaena_hyaena.HyaHya_flattened_line_20729             I 8 I 140
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19657 20 -    119109 T----------GTGGAAC-------------------ATGTATATT-TAT---------------------------------------------------------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       I 8 I 266
s Hylobates_abbotti.k141_164775                               840 84 -      2073 T---TATTGTTGAGGAGC-------------------GTGCATGTT-TGTTTGAGCTTATTTATATATACAGAGCTGTTTAGCTTAATATTTAAATTGAAAATTTTT
i Hylobates_abbotti.k141_164775                         C 0 C 0
s Hylobates_agilis.k141_1621614                               867 84 -      1673 T---TATTGTTGGGGAGC-------------------GTGCATGTT-TGTTTGAGCTTATTTGTATATACAGAGCTGTTTAGCTTAATATTTAAATTGAAAATTTTT
i Hylobates_agilis.k141_1621614                         I 78 I 56
s Hylobates_klossii.k141_468230                               393 84 +      5464 T---TATTGTTGGGGAGC-------------------GTGCATGTT-TGTTTGAGCTTATTTGTATATACAGAGCTGTTTAGCTTAATATTTAAGTTGAAAATTTTT
i Hylobates_klossii.k141_468230                         I 78 I 144
s Hylobates_pileatus_b.ContigUN                                 14625746 84 -  25970782 T---TATTGTTGGGGAGC-------------------GTGCATGTT-TGTTTGAGCTTATTTATATATACAGAGCTGTTTAGCTTAATATTTAAATTGAAAATTTTT
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_950183                              443 84 +      2027 T---TATTGTTGGGGAGC-------------------GTGCATGTT-TGTTTGGGCTTATTTATATATACAGAGCTGTTTAGCTTAATATTTAAATTGAAAATTTTT
i Hylobates_muelleri.k141_950183                        C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             34906 84 -     60944 T---TATTGTTGGGGAGC-------------------GTGCATGTT-TGTTTGAGCTTATTTATATATACAGAGCTGTTTAGCTTAATATTTAAATTGAAAATTTTT
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     6822 27 +     22540 T---TGTGTTTATGGAGC-------------------ATGTATTTG-TGA---------------------------------------------------------
i Hystrix_cristata.HysCri_scaffold_50788                I 8 I 158
s Ictidomys_tridecemlineatus.JH393315.1                   7126522 24 +  13083262 T---TGT---CACCAAGC-------------------ATGCAACTT-CAT---------------------------------------------------------
i Ictidomys_tridecemlineatus.JH393315.1                 I 8 I 141
s Inia_geoffrensis.IniGeo_flattened_line_66725               9700 27 +     17520 T---TGTTGTCATGGAGC-------------------ATGTACATT-TGC---------------------------------------------------------
i Inia_geoffrensis.IniGeo_flattened_line_66725          I 8 I 138
s Jaculus_jaculus.JH725517.1                              8566613 24 +  11848649 T---TTTTGTCACA---A-------------------AGGCACATT-CGC---------------------------------------------------------
i Jaculus_jaculus.JH725517.1                            I 8 I 149
s Kogia_breviceps.KogBre_flattened_line_35920               24307 27 +     37189 T---TGCTGTCATGGAGC-------------------ATGTACATT-TGC---------------------------------------------------------
i Kogia_breviceps.KogBre_flattened_line_35920           I 8 I 131
s Lagothrix_lagothricha.k141_12968                          50942 84 -    147782 T---TATTGTTGGGGAGC-------------------ACGTACATT-TGTTTGAACTTATTTATATATACAGAGTTGTTTAGCTTAATATTTAAATTGAAAATTTTT
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3086667 27 -   3498232 T---TGTTTTCACAGAGC-------------------ATGTACATT-TGT---------------------------------------------------------
i Leptonychotes_weddellii.KB714749.1                    I 8 I 144
s Lepus_americanus.LepAme_scaffold_62849                    13954 27 +     22452 T---TAATGTCACAGAGT-------------------ATGTACATT-TGT---------------------------------------------------------
i Lepus_americanus.LepAme_scaffold_62849                I 8 I 183
s Lipotes_vexillifer.KE558548.1                            136657 27 +   3060487 T---TGTTGTCATGGAGC-------------------ATGTACATT-TGC---------------------------------------------------------
i Lipotes_vexillifer.KE558548.1                         I 8 I 137
s Lophocebus_aterrimus.ctg55                             19249409 79 +  19376315 T---TATTGTTGGGGAGC-------------------ATGCCCATT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTTAAATTGAAAATTTTT
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loxodonta_africana.GL010040.1                          20595494 27 -  62548349 C---TGTTGCCACAGGGC-------------------ATGTACTTA-TGT---------------------------------------------------------
i Loxodonta_africana.GL010040.1                         I 8 I 159
s Lycaon_pictus.CM007556.1                               11088805 27 +  39895028 T---TGTTTCCACAGTGC-------------------ATGTGCATT-TGt---------------------------------------------------------
i Lycaon_pictus.CM007556.1                              I 8 I 145
s Macaca_arctoides.k141_2201161                             21167 79 +     74745 T---TATTGTTGGGGAGC-------------------ATGCCCATT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTTAAATTGAAAATTTTT
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12707627 79 +  12821369 T---TATTGTTGGGGAGC-------------------ATGCCCATT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTTAAATTGAAAATTTTT
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                 204 79 -     26467 T---TATTGTTGGGGAGC-------------------ATGCCCATT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTTAAATTGAAAATTTTT
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           48073 79 +     63263 T---TATTGTTGGGGAGC-------------------ATGCCCATT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTTAAATTGAAAATTTTT
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                  183 79 -     26361 T---TATTGTTGGGGAGC-------------------ATGCCCATT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTTAAATTGAAAATTTTT
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 3358 79 -      7381 T---TATTGTTGGGGAGC-------------------ATGCCCATT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTTAAATTGAAAATTTTT
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  46596 79 -     79256 T---TATTGTTGGGGAGC-------------------ATGCCCATT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTTAAATTGAAAATTTTT
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196036698 79 + 196197964 T---TATTGTTGGGGAGT-------------------ATGCCCATT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCatatttaaattgaaaattttt
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11446864 79 +  11645122 T---TATTGTTGGGGAGC-------------------ATGCCCATT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTcatatttaaattgaaaattttt
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   5550 79 -     46448 T---TATTGTTGGGGAGC-------------------ATGCCCATT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTTAAATTGAAAATTTTT
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                3217 79 -     13212 T---TATTGTTGGGGAGC-------------------ATGCCCATT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTTAAATTGAAAATTTTT
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 16893 79 -     55006 T---TATTGTTGGGGAGC-------------------ATGCCCATT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTTAAATTGAAAATTTTT
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43841999 79 +  43892939 T---TATTGTTGGGGAGC-------------------ATGCCCATT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTTAAATTGAAAATTTTT
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               18180 79 -     24607 T---TATTGTTGGGGAGC-------------------ATGCCCATT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTTAAATTGAAAATTTTT
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               5547 79 -     27140 T---TATTGTTGGGGAGC-------------------ATGCCCATT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTTAAATTGAAAATTTTT
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43438581 79 -  43563597 T---TATTGTTGGGGAGC-------------------ATGCCCATT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTTAAATTGAAAATTTTT
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4451395 79 -   4543643 T---TATTGTTGGGGAGC-------------------ATGCCCATT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTTAAATTGAAAATTTTT
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            146750 27 +    252755 A---TGCTGTCACAAAGC-------------------ATGTACATT-TGT---------------------------------------------------------
i Manis_javanica.JSZB01003966.1                         I 8 I 149
s Manis_pentadactyla.KN017078.1                             36892 27 +     58827 A---TGCTGTCACAAAGC-------------------ATGTACGTT-TGT---------------------------------------------------------
i Manis_pentadactyla.KN017078.1                         I 8 I 151
s Marmota_marmota.CZRN01000005.1                         36874338 24 +  64221397 T---TGT---CACCAAGC-------------------ATGCAACTT-CAT---------------------------------------------------------
i Marmota_marmota.CZRN01000005.1                        I 6 I 245
s Mellivora_capensis.MelCap_flattened_line_15433             1693 27 -     87323 T---TGTTTTCACAGAGC-------------------ATGTACATT-GGT---------------------------------------------------------
i Mellivora_capensis.MelCap_flattened_line_15433        I 8 I 141
s Meriones_unguiculatus.MerUng_scaffold_52233               13915 27 +     15977 t---tctagaCATGGAAC-------------------TTGTACCTT-GTC---------------------------------------------------------
i Meriones_unguiculatus.MerUng_scaffold_52233           I 44 I 122
s Mesocricetus_auratus.KB708139.1                         1047625 27 -  26018355 C---TCTTGATGTAGAGC-------------------TTACACACT-GGC---------------------------------------------------------
i Mesocricetus_auratus.KB708139.1                       I 60 I 119
s Mesoplodon_bidens.MesBid_scaffold_227248                    984 27 -      1377 T---TGTTGTCATGGAGC-------------------ATGTACATT-TGC---------------------------------------------------------
i Mesoplodon_bidens.MesBid_scaffold_227248              I 8 I 133
s Microgale_talazaci.MicTal_scaffold_34660                  35557 13 -     48017 -----------------T-------------------ATATACCTA-TGT---------------------------------------------------------
i Microgale_talazaci.MicTal_scaffold_34660              C 0 I 3525
s Micronycteris_hirsuta.MicHir_scaffold_37978               23593 24 -     32043 T---T---GTCACAGAGC-------------------ACTCACAT-TTGT---------------------------------------------------------
i Micronycteris_hirsuta.MicHir_scaffold_37978           I 8 I 149
s Microtus_ochrogaster.CM001673.1                        22820345 32 -  98408828 C---TATAGGTAAACAGC-C-------A-AA-T--A--TAAACATT-GGC---------------------------------------------------------
i Microtus_ochrogaster.CM001673.1                       I 4 I 122
s Miniopterus_natalensis.LDJU01000022.1                   8210763 24 +  10048721 T---T---GTCACAGAGC-------------------AAGCACATT-TGt---------------------------------------------------------
i Miniopterus_natalensis.LDJU01000022.1                 I 7 I 1042
s Miniopterus_schreibersii.MinSch_scaffold_24116            35252 24 +     45743 T---T---GTCACAGAGC-------------------AAGCACATT-TGT---------------------------------------------------------
i Miniopterus_schreibersii.MinSch_scaffold_24116        I 7 I 1042
s Miopithecus_ogouensis.k141_2935907                         3142 79 +     29742 T---TATTGTCGGGGAGC-------------------ATGCCCATT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTTAAATTGAAAATTTTT
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        12183 27 -    104932 T---TGTTTTCACAGAGC-------------------ATGTACATT-TGT---------------------------------------------------------
i Mirounga_angustirostris.MirAng_flattened_line_8852    I 8 I 144
s Monodon_monoceros.MonMon_M_scaffold_5598                 147085 27 +    154973 T---TGTTGTCATGGAGC-------------------ATGTACATT-TGC---------------------------------------------------------
i Monodon_monoceros.MonMon_M_scaffold_5598              I 8 I 137
s Mormoops_blainvillei.MorMeg_scaffold_2952                162115 24 +    265003 T---T---GTCACAGAGC-------------------ACGCACAT-TTCT---------------------------------------------------------
i Mormoops_blainvillei.MorMeg_scaffold_2952             I 8 I 149
s Moschus_moschiferus.MosMos_scaffold_78805                  2167 27 -     19904 T---TGTTGTCACCTATT-------------------ATGTACATT-TAT---------------------------------------------------------
i Moschus_moschiferus.MosMos_scaffold_78805             I 8 I 148
s Mungos_mungo.MunMun_flattened_line_8729                  145599 27 -    168139 T---TGTTTTCAGAGCAC-------------------ATGTCCATT-TGT---------------------------------------------------------
i Mungos_mungo.MunMun_flattened_line_8729               I 8 I 146
s Murina_feae.MurFea_scaffold_2254                          22116 23 -    100666 T---T---ACCATGGAGC-------------------AAACACAT--TGT---------------------------------------------------------
i Murina_feae.MurFea_scaffold_2254                      I 8 I 1145
s Muscardinus_avellanarius.MusAve_scaffold_9643             12940 27 +     98495 TTGTTGT---TGTAAAGC-------------------ATGCATTTT-TGT---------------------------------------------------------
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 9 I 157
s Mustela_putorius.JH417978.1                             4425061 27 -  28371801 T---TGTTTAAACAGGGC-------------------GTGTACCTT-GGT---------------------------------------------------------
i Mustela_putorius.JH417978.1                           I 8 I 144
s Myocastor_coypus.MyoCoy_scaffold_3653                     91062 15 -    117718 ---------------AGC-------------------CCATACTTC-TGC---------------------------------------------------------
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 4 I 157
s Myotis_brandtii.KE161952.1                               969733 23 +   8389877 T---T---GTCATGGAAC-------------------AAACACAT--TGT---------------------------------------------------------
i Myotis_brandtii.KE161952.1                            I 8 I 148
s Myotis_davidii.KB114863.1                               5021157 23 +   6462685 T---T---GTCATGGAGC-------------------AAACACAT--TGT---------------------------------------------------------
i Myotis_davidii.KB114863.1                             I 8 I 150
s Myotis_lucifugus.GL429887.1                             3467235 23 -   3747815 T---T---GTCATGGAAC-------------------AAACACAT--TGT---------------------------------------------------------
i Myotis_lucifugus.GL429887.1                           I 8 I 148
s Myotis_myotis.MyoMyo_scaffold_6123                        12478 23 +     66751 T---T---GTCATGGAGC-------------------AAACACAT--TGT---------------------------------------------------------
i Myotis_myotis.MyoMyo_scaffold_6123                    I 8 I 150
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             5717 26 -      8794 T---GGTTGTTA-ACGGC-------------------ACACACAAA-TGT---------------------------------------------------------
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        I 8 I 156
s Nasalis_larvatus.k141_153429                               9621 79 +     48152 T---TATTGTTGGGGAGC-------------------ATGCCCGTT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTCAAATTGAAAATTTTT
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4485573 27 -  14209539 T---TGTTTTCACAGAGC-------------------ATGTACATT-TGT---------------------------------------------------------
i Neomonachus_schauinslandi.NINY01007774.1              I 8 I 144
s Neophocaena_asiaeorientalis.KZ688543.1                  3951697 27 -   4490290 T---TGTTGTCATGGAGC-------------------ATGTACATT-TGC---------------------------------------------------------
i Neophocaena_asiaeorientalis.KZ688543.1                I 8 I 137
s Nomascus_annamensis.k141_220265                            1518 84 +      1763 T---TATTGTTGGGGAGC-------------------GTGCATGTT-TGTTTGAGCTTATTTATATACACAGAGCTGTTTAGCTTAATATTTAAATTGAAAATTTTT
i Nomascus_annamensis.k141_220265                       C 0 I 56
s Nomascus_concolor.k141_226614                              2308 84 -      5092 T---TATTGTTGGGGAGC-------------------GTGCATGTT-TGTTTGAGCTTATTTATATATACAGAGCTGTTTAGCTTAATATTTAAATTGAAAATTTTT
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_1004198                            871 84 +      1448 T---TATTGTTGGGGAGC-------------------ATGCATGTT-TGTTTGAGCTTATTTATATATGCAGAGCTGTTTAGCTTAATATTTAAATTGAAAATTTTT
i Nomascus_gabriellae.k141_1004198                      C 0 C 0
s Nomascus_siki_a.k141_595747                                  3730 84 +      4512 T---TATTGTTGGGGAGC-------------------ATGCATGTT-TGTTTGAGCTTATTTATATATACAGAGCTGTTTAGCTTAATATTTAAATTGAAAATTTTT
i Nomascus_siki_a.k141_595747                             I 39 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                31606 27 +   3668941 T---TGTTTTCACAGTGC-------------------ATGTGCATT-TGt---------------------------------------------------------
i Nyctereutes_procyonoides.CAJHUB010000786.1            I 8 I 144
s Ochotona_princeps.JH802095.1                            4996702 27 -  23139505 T---TAATATCACAGagc-------------------atatacata-tgt---------------------------------------------------------
i Ochotona_princeps.JH802095.1                          I 8 I 2205
s Octodon_degus.JH651621.1                                3686556 15 +  10294119 ---------------AGC-------------------ACATACTTC-TGT---------------------------------------------------------
i Octodon_degus.JH651621.1                              I 4 I 159
s Odobenus_rosmarus.KB229369.1                             680240 27 -   3126709 T---TGTTTTCACAGAGC-------------------ATGTACATT-TGT---------------------------------------------------------
i Odobenus_rosmarus.KB229369.1                          I 8 I 144
s Odocoileus_virginianus.KZ101650.1                       1080347 27 +   1425656 T---TGTTGTCAcctatt-------------------atgtatatt-tat---------------------------------------------------------
i Odocoileus_virginianus.KZ101650.1                     I 8 I 155
s Okapia_johnstoni.LVCL01S0017931.1                         37638 26 +     78940 T---TGTTGTCACCTATT-------------------ATGTAcatt-ta----------------------------------------------------------
i Okapia_johnstoni.LVCL01S0017931.1                     I 8 I 153
s Ondatra_zibethicus.OndZib_scaffold_6821                  125598 32 +    145789 C---TATAGGTAAAGAGC-CAGAG---A----------TAAACATC-GGC---------------------------------------------------------
i Ondatra_zibethicus.OndZib_scaffold_6821               I 4 I 120
s Onychomys_torridus.OnyTor_scaffold_12578                  37794 27 +     62360 c---tcttgaCATGGAAC-------------------ATATACTTT-AGC---------------------------------------------------------
i Onychomys_torridus.OnyTor_scaffold_12578              I 39 I 122
s Orcinus_orca.KB316965.1                                 7225382 27 -   7562323 T---TGTTGTCATGGAGC-------------------ATGTACATT-TGC---------------------------------------------------------
i Orcinus_orca.KB316965.1                               I 8 I 137
s Orycteropus_afer.OryAfe_flattened_line_13509              60626 27 -     66828 T---TTTTGTTGCATGGC-------------------AGGAACATA-TGT---------------------------------------------------------
i Orycteropus_afer.OryAfe_flattened_line_13509          I 8 I 153
s Oryctolagus_cuniculus.CM000803.1                      141876991 27 + 163896628 T---TAATGTCATAGAGT-------------------ATGTACATT-TGT---------------------------------------------------------
i Oryctolagus_cuniculus.CM000803.1                      I 8 I 183
s Otocyon_megalotis.JAEUCK010005121.1                      308890 27 -    505867 T---TGTTTTCACAGTGC-------------------ATGTGCATT-TGt---------------------------------------------------------
i Otocyon_megalotis.JAEUCK010005121.1                   I 8 I 144
s Ovis_aries.CM001582.2                                 134077943 27 - 275406953 T---TGTTGTCACCTATT-------------------ATGCACACt-tat---------------------------------------------------------
i Ovis_aries.CM001582.2                                 I 8 I 152
s Ovis_canadensis.OviCan_scaffold_6251                      79158 27 +    140051 T---TGTTGTCACCTATT-------------------ATGCACATT-TAT---------------------------------------------------------
i Ovis_canadensis.OviCan_scaffold_6251                  I 8 I 152
s Pan_paniscus.CM003386.1                               127575730 84 - 205426864 T---TATTGTTGGGGAGC-------------------ATGCACATT-TGTTTGAGCTTATTTATATATACAGAGCTGTTTAGcttaatatttaaattgaaaattttt
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120152884 84 - 196562556 T---TATTGTTGGGGAGC-------------------ATGCACATT-TGTTTGAGCTTATTTATATATACAGAGCTGTTTAGcttaatatttaaattgaaaattttt
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  35023 27 +    295523 T---TGTTTTCACAGAGC-------------------ATGTACGTT-TGT---------------------------------------------------------
i Panthera_onca.PanOnc_flattened_line_1615              I 8 I 144
s Panthera_pardus.KV860323.1                              3638773 27 +  18214204 T---TGTTTTCACAGAGC-------------------ATGTACATT-TGT---------------------------------------------------------
i Panthera_pardus.KV860323.1                            I 8 I 144
s Panthera_tigris.KE721879.1                              5028449 27 -   6340057 T---TGTTTTCACAGAGC-------------------ATGTACATT-TGT---------------------------------------------------------
i Panthera_tigris.KE721879.1                            I 8 I 144
s Pantholops_hodgsonii.KE114631.1                         1066793 27 -   1292953 T---TGTTGTCACCtatt-------------------atgtacatt-tat---------------------------------------------------------
i Pantholops_hodgsonii.KE114631.1                       I 8 I 152
s Papio_anubis.CM001492.2                               188157379 79 - 188283584 T---TATTGTTGGGGAGT-------------------ATGCCCATT-TGTTTGAGCTTATTTAT-----CAGAGTTATTTAGTTTCatatttaaattgaaaattttt
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                               471 79 +     25005 T---TATTGTTGGGGAGT-------------------ATGCCCATT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTTAAATTGAAAATTTTT
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47514756 79 +  47705337 T---TATTGTTGGGGAGC-------------------ATGCCCATT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTTAAATTGAAAATTTTT
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 68742 79 -    104429 T---TATTGTTGGGGAGT-------------------ATGCCCATT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTTAAATCGAAAATTTTT
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    7275 79 +     14967 T---TATTGTTGGGGAGC-------------------ATGCCCATT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTTAAATTGAAAATTTTT
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 3136 79 -      7628 T---TATTGTTGGGGAGT-------------------ATGCCCATT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTTAAATTGAAAATTTTT
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    116481 27 -    135482 T---TGTTTTCACAGAGC-------------------TTGTACATC-TGT---------------------------------------------------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 I 8 I 146
s Perognathus_longimembris.PerPac_flattened_line_19359        723 25 +     49596 A---TGTTGTAGCAGAGT-------------------G--CACATT-TTT---------------------------------------------------------
i Perognathus_longimembris.PerPac_flattened_line_19359  I 8 I 143
s Peromyscus_maniculatus.KI615518.1                       4951120 27 -   8017169 C---TCTTGACATGGAAC-------------------GTATACTTT-AGC---------------------------------------------------------
i Peromyscus_maniculatus.KI615518.1                     I 114 I 122
s Petromus_typicus.PetTyp_scaffold_33007                    14291 27 -     36578 T---TATGTTTATGGAAC-------------------ATATGTACT-TGT---------------------------------------------------------
i Petromus_typicus.PetTyp_scaffold_33007                I 8 I 145
s Phocoena_phocoena.PhoPho_flattened_line_11948            121986 27 -    122454 T---TGTTGTCATGGAGC-------------------ATGTACATT-TGC---------------------------------------------------------
i Phocoena_phocoena.PhoPho_flattened_line_11948         I 8 I 137
s Piliocolobus_badius.k141_1987485                           3150 79 -      5908 T---TATTGTTGGGGAGC-------------------ATGCCCGTT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTTAAATTGAAAATTTTT
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       3768 79 -     17985 T---TATTGTTGGGGAGC-------------------ATGCCCGTT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTTAAATTGAAAATTTTT
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            3135 79 +      7694 T---TATTGTTGGGGAGC-------------------ATGCCCGTT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTTAAATTGAAAATTTTT
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26741619 79 +  26888534 T---TATTGTTGGGGAGC-------------------ATGCCCGTT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTcatatttaaattgaaaattttt
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pithecia_albicans.k141_991845                             44548 84 -     61926 T---TATTGTTGGGGAGC-------------------ATGCACATT-TGTTTGAACTTATTTATATATACAGAGTTGTTTAGCTTAATATTTAAATTGAAAATTTTT
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        25933 84 +     78826 T---TATTGTTGGGGAGC-------------------ATGCACATT-TGTTTGAACTTATTTATATATACAGAGTTGTTTAGCTTAATATTTAAATTGAAAATTTTT
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                              9980 84 -     15800 T---TATTGTTGGGGAGC-------------------ATGCACATT-TGTTTGAACTTATTTATATATACAGAGTTGTTTAGCTTAACATTTAAATTGAAAATTTTT
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        13179 84 -     16101 T---TATTGTTGGGGAGC-------------------ATGCACATT-TGTTTGAACTTATTTATATATACAGAGTTGTTTAGCTTAACATTTAAATTGAAAATTTTT
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          6407 84 +      9673 T---TATTGTTGGGGAGC-------------------ATGCACATT-TGTTTGAACTTATTTATATATACAGAGTTGTTTAGCTTAACATTTAAATTGAAAATTTTT
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13475407 84 -  19735023 T---TATTGTTGGGGAGC-------------------ATGCACATT-TGTTTGAACTTATTTATATATACAGAGTTGTTTAGCTTAATATTTAAACTGAAAATTTTT
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           14310 84 -     31692 T---TATTGTTGGGGAGC-------------------ATGCACATT-TGTTTGAACTTATTTATATATACAGAGTTGTTTAGCTTAATATTTAAATTGAAAATTTTT
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           6073 27 +     21690 T---TGTTATCATGGAGC-------------------ATGTACATT-TGC---------------------------------------------------------
i Platanista_gangetica.PlaMin_flattened_line_72990      I 8 I 365
s Plecturocebus_bernhardi.k141_959214                       23646 84 +     44506 T---TATTGTTGGGGAGC-------------------ATGCATATT-TGTTTGAACTTATTTACAAATACGGAGTTGTTTAGCTTAATATTTAAATTGAAAATTTTT
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        23858 84 +     67491 T---TATTGTTGGGGAGC-------------------ATGCACATT-TGTTTGAACTTATTTACAAATACGGAGTTGTTTAGCTTAATATTTAAATTGAAAATTTTT
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      14098 84 -     98129 T---TATTGTTGGGGAGC-------------------ATGCACATT-TGTTTGAACTTATTTACAAATACGGAGTTGTTTAGCTTAATATTTAAATTGAAAATTTTT
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     23698 84 +    147771 T---TATTGTTGGGGAGC-------------------ATGCACATT-TGTTTGAACTTATTTACAAATACGGAGTTGTTTAGCTTAATATTTAAATTGAAAATTTTT
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                          334 84 -     43940 T---TATTGTTGGGGAGC-------------------ATGCACATT-TGTTTGAACTTATTTACAAATACGGAGTTGTTTAGCTTAATATTTAAATTGAAAATTTTT
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          4417 84 -     55515 T---TATTGTTGGGGAGC-------------------ATACACATT-TGTTTGAACTTATTTACAAATACGGAGTTGTTTAGCTTAATATTTAAATTGAAAATTTTT
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         23771 84 +    152463 T---TATTGTTGGGGAGC-------------------ATGCACATT-TGTTTGAACTTATTTACAAATACGGAGTTGTTTAGCTTAATATTTAAATTAAAAATTTTT
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       1488 84 -    119457 T---TATTGTTGGGGAGC-------------------ATGCACATT-TGTTTGAACTTATTTACAAATACGGAGTTGTTTAGCTTAATATTTAAATTAAAAATTTTT
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         13494 84 +    134592 T---TATTGTTGGGGAGC-------------------ATGCACATT-TGTTTGAACTTATTTACAAATACGGAGTTGTTTAGCTTAATATTTAAATTAAAAATTTTT
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          24081 84 -     75465 T---TATTGTTGGGGAGC-------------------ATGCACATT-TGTTTGAACTTATTTACAAATACGGAGTTGTTTAGCTTAATATTTAAATTAAAAATTTTT
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              188250 84 -    373494 T---TATTGTTTAGGAGC-------------------ATGCACGTT-TGTTTGAGCTTATTTATATATACAGAGCTGTTTAGCTTAATActtaaattgaaaattttt
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19808898 84 +  19899266 T---TATTGTTTAGGAGC-------------------ATGCACGTT-TGTTTGAGCTTATTTATATATACAGAGCTGTTTAGCTTAATACTTAAATTGAAAATTTTT
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               6900 79 -     15069 T---TATTGTTGGGGAGC-------------------ATGCCTGTT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTTAAATTGAAAATTTTT
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              7015 79 +     14865 T---TATTGTTGGGGAGC-------------------ATGCCTGTT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTTAAATTGAAAATTTTT
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Psammomys_obesus.NESX01026517.1                           36205 27 +     77221 C---TCTAGACATGGAGC-------------------TTGTACCTT-GTC---------------------------------------------------------
i Psammomys_obesus.NESX01026517.1                       I 52 I 122
s Pteronotus_parnellii.KE867983.1                            4756 43 -     27784 T---T---GTCACAGTACTCTGTGTGTATAACTTTATACACATAT-Ttgt---------------------------------------------------------
i Pteronotus_parnellii.KE867983.1                       I 8 I 136
s Pteronura_brasiliensis.PteBra_flattened_line_1343        247372 27 -    344369 T---TGTTTTCACAGAGC-------------------ATGTACATT-GGT---------------------------------------------------------
i Pteronura_brasiliensis.PteBra_flattened_line_1343     I 8 I 144
s Pteropus_alecto.KB031157.1                             13246663 27 -  17261082 T---TGTTGTCATGGAGG-------------------AGGCACATT-TGT---------------------------------------------------------
i Pteropus_alecto.KB031157.1                            I 8 I 132
s Pteropus_vampyrus.KN525959.1                             604614 27 -   3946241 T---TGTTGTCATGGAGG-------------------AGGCACATT-TGT---------------------------------------------------------
i Pteropus_vampyrus.KN525959.1                          I 8 I 132
s Puma_concolor.QAVW01000427.1                          131535044 27 - 161321710 T---TGTTTTCACAGAGC-------------------ATGTACATT-TGT---------------------------------------------------------
i Puma_concolor.QAVW01000427.1                          I 8 I 144
s Pygathrix_cinerea.k141_374971                             31003 79 +     56732 T---TATTGTTGGGGAGC-------------------ATGCCCGTT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTCAAATTGAAAATTTTT
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6807497 79 +   6970761 T---TATTGTTGGGGAGC-------------------ATGCCCGTT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTCAAATTGAAAATTGTT
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             6890 79 +     18040 T---TATTGTTGGGGAGC-------------------ATGCCCGTT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTCAAATTGAAAATTGTT
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                16461 27 +     68503 T---TGTTGTCACCTATT-------------------ATGTATATT-TAT---------------------------------------------------------
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 8 I 153
s Rhinolophus_sinicus.LVEH01000179.1                      1788536 27 +   2252614 T---TGTTGTCATGGAAT-------------------GTGCCTATT-TGT---------------------------------------------------------
i Rhinolophus_sinicus.LVEH01000179.1                    I 8 I 148
s Rhinopithecus_bieti.k119_554384                            1287 79 -     17045 T---TATTGTTGGGGAGC-------------------ATGCCCGTT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTCAAATTGAAAATTTTT
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206378775 79 - 206558726 T---TATTGTTGGGGAGC-------------------ATGCCCGTT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTCAAATTgaaaattttt
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44857677 79 -  45163003 T---TATTGTTGGGGAGC-------------------ATGCCCGTT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTCAAATTGAAAATTTTT
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                19996 18 +    109198 T---TGTTGTCATGC----------------------------CGT-TGT---------------------------------------------------------
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            I 8 I 148
s Saiga_tatarica.SaiTat_scaffold_82192                       8618 27 +     12214 T---TGTTGTCATCCATT-------------------ATGTACATT-TAT---------------------------------------------------------
i Saiga_tatarica.SaiTat_scaffold_82192                  I 8 I 152
s Saimiri_boliviensis.NW_024100938.1                     15673507 82 -  43202129 T---TATTGGTGGGGAGC-------------------ATGCACATT-TATTTGAACTTACTTATCTATACAGAATTGTTTAgcttaatatttaaattgaaaatta--
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        5420 82 +     34089 T---TATTGGTGGGGAGC-------------------ATGCACATT-TATTTGAACTTACTTATCTATACAGAGTTGTTTAGCTTAATATTTAAATTGAAAATTA--
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              5362 82 -     60842 T---TATTGGTGGGGAGC-------------------ATGCACATT-TATTTGAACTTACTTATCTATACAGAGTTGTTTAGCTTAATATTTAAATTGAAAATTA--
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              5455 82 +     67014 T---TATTGGTGGGGAGC-------------------ATGCACATT-TATTTGAACTTACTTATCTATACAGAGTTGTTTAGCTTAATATTTAAATTGAAAATTA--
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              5433 82 +     60816 T---TATTGGTGGGGAGC-------------------ATGCACATT-TATTTGAACTTACTTATCTATACAGAGTTGTTTAGCTTAATATTTAAATTGAAAATTA--
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 5370 82 -     76454 T---TATTGGTGGGGAGC-------------------ATGCACATT-TATTTGAACTTACTTATCTATACAGAGTTGTTTAGCTTAATATTTAAATTGAAAATTA--
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17342097 82 -  30362882 T---TATTGTTGGGGAGC-------------------ATGCACATT-TGTTTGAACTTATCTGTACATACAGAGTTGTTTAGCTTAATATTTAAATTGAAAATTT--
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         21458 82 -     62485 T---TATTGTTGGGGAGC-------------------ATGCACATT-TGTTTGAACTTATCTGTACATACAGAGTTGTTTAGCTTAATATTTAAATTGAAAATTT--
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   33451 26 -    114521 C---TGTTACCGCAAA-A-------------------GTGTTCTTT-TGT---------------------------------------------------------
i Scalopus_aquaticus.ScaAqu_scaffold_9300               I 499 I 4053
s Semnopithecus_entellus.k141_1572367                        4507 79 +     15331 T---TATTGTTGGGGAGC-------------------ATGCCCGTT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTTAAATTGAAAATTTTT
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       9882 79 +     20762 T---TATTGTTGGGGAGC-------------------ATGCCCGTT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTTAAATTGAAAATTTTT
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         119888 79 +    130994 T---TATTGTTGGGGAGC-------------------ATGCCCGTT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTTAAATTGAAAATTTTT
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           38666 79 +     46263 T---TATTGTTGGGGAGC-------------------ATGCCCGTT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTTAAATTGAAAATTTTT
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     31811 79 +     42640 T---TATTGTTGGGGAGC-------------------ATGCCCGTT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTTAAATTGAAAATTTTT
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        14833 79 +     30600 T---TATTGTTGGGGAGC-------------------ATGCCCGTT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTTAAATTGAAAATTTTT
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  100977 21 -    120886 C---TCATGACATGGAA-------------------------TATT-GAC---------------------------------------------------------
i Sigmodon_hispidus.SigHis_scaffold_11332               I 37 I 122
s Solenodon_paradoxus.SolPar_flattened_line_1012            19561 27 +    739146 T---TGTTGTCACAGATG-------------------ATCTACATT-TCT---------------------------------------------------------
i Solenodon_paradoxus.SolPar_flattened_line_1012        I 8 I 140
s Sorex_araneus.JH798170.1                               17767131 27 -  27805282 T---TATTCTTATAGAAC-------------------CTATTTTCT-TGT---------------------------------------------------------
i Sorex_araneus.JH798170.1                              I 6 I 152
s Spermophilus_dauricus.KZ294190.1                        2240438 24 +   2842873 T---TGT---CACCAAGC-------------------ATGCAACTT-CAT---------------------------------------------------------
i Spermophilus_dauricus.KZ294190.1                      I 8 I 141
s Spilogale_gracilis.SpiGra_flattened_line_905             235496 27 -    276980 T---TCTTTTCACAGAGC-------------------ATGCATATT-GGT---------------------------------------------------------
i Spilogale_gracilis.SpiGra_flattened_line_905          I 8 I 394
s Suricata_suricatta.SurSur_flattened_line_20339            28259 27 +     62062 T---TGTTTTCAGAGCAC-------------------ATGTCCATT-TGT---------------------------------------------------------
i Suricata_suricatta.SurSur_flattened_line_20339        I 8 I 145
s Sus_scrofa.CM000824.4                                 189272771 27 + 218635234 T---TATTTTCATGGAGT-------------------GTGTGCATT-Tgt---------------------------------------------------------
i Sus_scrofa.CM000824.4                                 I 8 I 143
s Symphalangus_syndactylus.tarseq_24                        16007 84 -  13920577 T---TATTGTTGGGGAGC-------------------GTGCATGTT-TGTTTGAGCTTATTTATATATACAGAGCTGTTTAGCTTAATATTTAAATTGAAAATTTTT
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                 953 24 +     20549 T---T---ATCACAGAGG-------------------AAGCACATC-TGT---------------------------------------------------------
i Tadarida_brasiliensis.TadBra_scaffold_61492           I 5 I 152
s Tamandua_tetradactyla.TamTet_scaffold_26877               15383 26 +     45698 T---GGTTGTTA-ACGGC-------------------ACACACAAA-TGT---------------------------------------------------------
i Tamandua_tetradactyla.TamTet_scaffold_26877           I 8 I 152
s Tapirus_indicus.TapInd_scaffold_176                      807806 27 +   1148477 T---TATTGTCACAGAGC-------------------ATGTATATT-TGC---------------------------------------------------------
i Tapirus_indicus.TapInd_scaffold_176                   I 8 I 149
s Tapirus_terrestris.TapTer_scaffold_14939                  58518 27 +     99546 T---TATTGTCACAGAGC-------------------ATGTACATT-TGC---------------------------------------------------------
i Tapirus_terrestris.TapTer_scaffold_14939              I 8 I 149
s Tarsius_lariang.k141_609102                               27170 46 +     42269 T---TAATGTCATGGAGC-------------------ATGTATATT-TGTACAAGTTTA---ACGTGTGCAG-----------------------------------
i Tarsius_lariang.k141_609102                           C 0 I 3812
s Tarsius_wallacei.k141_48636                               60486 46 +     65473 T---TAATGTCATGGAGC-------------------ATGTATATT-TGTACAAGTTTA---ACGTGTGCAG-----------------------------------
i Tarsius_wallacei.k141_48636                           C 0 I 3805
s Theropithecus_gelada.CM009951.1                       194008907 79 - 194193292 T---TATTGTTGGGGAGC-------------------ATGCCCATT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCatatttaaattgaaaattttc
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             39501 27 -     47444 T---TGTCTTTATGAAAC-------------------ATGTATACC-TAT---------------------------------------------------------
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         I 8 I 295
s Tolypeutes_matacus.TolMat_scaffold_269431                  6193 27 +      6782 G---GGTTGTCATAGGGC-------------------ATGTACAGA-TAT---------------------------------------------------------
i Tolypeutes_matacus.TolMat_scaffold_269431             I 8 I 146
s Tonatia_saurophila.TonSau_scaffold_3334                  136742 24 -    259118 T---T---GCAACAGAGC-------------------ACGCACAT-TTAT---------------------------------------------------------
i Tonatia_saurophila.TonSau_scaffold_3334               I 8 I 148
s Trachypithecus_auratus.k141_738098                        27992 79 +     38948 T---TATTGTTGGGGAGC-------------------ATGCCCGTT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTTAAATTGAAAATTTTT
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   21714 79 -     32910 T---TATTGTTGGGGAGC-------------------ATGCCCGTT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTTAAATTGAAAATTTTT
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      3126 79 -     12939 T---TATTGTTGGGGAGC-------------------ATGCCCGTT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTTAAATTGAAAATTTTT
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       3044 79 -     14244 T---TATTGTTGGGGAGC-------------------ATGCCCGTT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTTAAATTGAAAATTTTT
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           44441 79 -     54611 T---TATTGTTGGGGAGC-------------------ATGCCCGTT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTTAAATTGAAAATTTTT
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        2238 79 -     11566 T---TATTGTTGGGGAGC-------------------ATGCCCATT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTTAAATTGAAAATTTTT
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     4421 79 -     15592 T---TATTGTTGGGGAGC-------------------ATGCCCGTT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTTAAATTGAAAATTTTT
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          3073 79 +     14371 T---TATTGTTGGGGAGC-------------------ATGCCCGTT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTTAAATTGAAAATTTTT
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   1360 79 +     12481 T---TATTGTTGGGGAGC-------------------ATGCCCGTT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTTAAATTGAAAATTTTT
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        1234 79 -     24393 T---TACTGTTGGGGAGC-------------------ATGCCCGTT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTTAAATTGAAAATTTTT
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       6484 79 -     28054 T---TACTGTTGGGGAGC-------------------ATGCCCGTT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTTAAATTGAAAATTTTT
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44661268 79 -  44834318 T---TATTGTTGGGGAGC-------------------ATGCCCATT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTTAAATTGAAAATTTTT
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       3584 79 +     13828 T---TATTGTTGGGGAGC-------------------ATGCCCGTT-TGTTTGAGCTTATTTAT-----CAGAGTTGTTTAGTTTCATATTTAAATTGAAAATTTTT
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   5815 27 +     90398 T---TGTTGTCATGGATT-------------------ATATACATT-TGT---------------------------------------------------------
i Tragulus_javanicus.TraJav_scaffold_14717              I 12 I 145
s Trichechus_manatus.JH594618.1                          16086017 27 +  31416278 T---TGTTGCTGCTGGGC-------------------GTGTATACA-tgt---------------------------------------------------------
i Trichechus_manatus.JH594618.1                         I 8 I 158
s Tupaia_chinensis.KB320831.1                             2793986 24 -   3938065 T---TG---CTACAGAAC-------------------ATGTACATT-TGT---------------------------------------------------------
i Tupaia_chinensis.KB320831.1                           I 3 I 238
s Tupaia_tana.TupTan_flattened_line_68454                    6176 24 +     13056 T---TG---CTACAGAAC-------------------ATGTACATT-TGT---------------------------------------------------------
i Tupaia_tana.TupTan_flattened_line_68454               I 3 I 129
s Tursiops_truncatus.MRVK01000923.1                      69314098 27 -  96451834 T---TGTTGTCATGGAGC-------------------ATGTACATT-TGC---------------------------------------------------------
i Tursiops_truncatus.MRVK01000923.1                     I 8 I 137
s Uropsilus_gracilis.UroGra_scaffold_69449                   2496 27 +     10241 T---TATTGTCACAGAGA-------------------AAACTCATT-TGT---------------------------------------------------------
i Uropsilus_gracilis.UroGra_scaffold_69449              I 508 I 5577
s Ursus_maritimus.KK498671.1                              6515491 27 +  28682327 t---ttttttcacagagc-------------------aTGTACATT-TGt---------------------------------------------------------
i Ursus_maritimus.KK498671.1                            I 8 I 144
s Vicugna_pacos.KN269600.1                                1525332 23 -   2331223 C---TGTTGTCACAGAgc-------------------att----tt-tgt---------------------------------------------------------
i Vicugna_pacos.KN269600.1                              I 8 I 134
s Vulpes_lagopus.VulLag_flattened_line_2045                138986 27 -    281493 T---TGTTTTCACAGTGC-------------------ATGTGCATT-TGT---------------------------------------------------------
i Vulpes_lagopus.VulLag_flattened_line_2045             I 8 I 144
s Xerus_inauris.XerIna_scaffold_7898                       127556 24 -    134049 T---TGC---CACTGAGC-------------------ACGTAACTT-CGT---------------------------------------------------------
i Xerus_inauris.XerIna_scaffold_7898                    I 8 I 141
s Zalophus_californianus.ZalCal_flattened_line_4097        214967 27 -    227762 T---TGTTTTCACAGCGC-------------------ATGTACATT-TGT---------------------------------------------------------
i Zalophus_californianus.ZalCal_flattened_line_4097     I 8 I 144
s Zapus_hudsonius.ZapHud_scaffold_64392                     16509 27 -     20485 T---TTTTGTCACAGAGA-------------------AGTCACATT-CAC---------------------------------------------------------
i Zapus_hudsonius.ZapHud_scaffold_64392                 I 8 I 153
s Ziphius_cavirostris.ZipCav_flattened_line_127025           7597 27 -      8775 T---TGTTGTCATGGAGC-------------------ATGTACATT-TGC---------------------------------------------------------
i Ziphius_cavirostris.ZipCav_flattened_line_127025      I 8 I 137
e Macroglossus_sobrinus.MacSob_scaffold_879                701732 90 +    802869 I
e Procavia_capensis.ProCapCap_scaffold_149274                2467 1156 -      9567 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Megaderma_lyra.MegLyr_scaffold_3562                       64783 239 -    234502 I
e Lasiurus_borealis.LasBor_scaffold_59542                    4392 78 +     26176 I
e Heterohyrax_brucei.HetBruBak_scaffold_25354               61360 1157 +     73687 I
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1008 325 -      5782 I
e Varecia_variegata.k141_775891                             25501  3 -     33872 I
e Varecia_rubra.k141_432109                                  5966  3 -     20643 I
e Rattus_norvegicus.chr11                                13915860 1475 +  90463843 I
e Propithecus_verreauxi.k141_158021                         39953  3 -     48185 I
e Propithecus_tattersalli.k141_907138                       17689  3 -     53241 I
e Propithecus_perrieri.k141_7554                            18055  3 +     27322 I
e Propithecus_edwardsi.k141_1317105                         36132  3 -     44753 I
e Propithecus_diadema.k141_577245                           43745  3 +     52369 I
e Propithecus_coronatus.k141_1353159                         4402  3 +     11805 I
e Propithecus_coquerelli.NW_012147863.1                     19492  3 -     30946 I
e Prolemur_simus.MPIZ01000048.1                           6849325  3 +  12164890 I
e Perodicticus_potto.k141_713187                            25474  3 -     27972 I
e Perodicticus_ibeanus.k141_117958                           6160  3 -     23713 I
e Otolemur_garnettii.GL873528.1                          18009456  3 -  38779656 I
e Otolemur_crassicaudatus.k141_505435                        1475  3 -     53940 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65670190  0 +  89412551 C
e Nycticebus_coucang.k141_2051882                            4581  0 +      6470 C
e Nycticebus_bengalensis.LG16                            65567855  0 -  95554990 C
e Nannospalax_galili.KL201303.1                            119159  6 +    362372 I
e Mus_spretus.CM004110.1                                 74333152 260 +  97876770 I
e Mus_pahari.LT608305.1                                  67556620 256 +  89017189 I
e Mus_musculus.chr16                                     75490417 259 +  98207768 I
e Mus_caroli.LT608236.1                                  70767340 259 +  92629107 I
e Mirza_zaza.k141_226143                                     6369  3 +      8497 I
e Microcebus_murinus.CM007691.1                          16510980  3 +  47401472 I
e Loris_tardigradus.ctg97                                 3779150  0 +   6799190 C
e Loris_lydekkerianus.k141_550999                           11401  0 +     84689 C
e Lepilemur_septentrionalis.k141_578524                     32347  3 -     33031 I
e Lepilemur_ruficaudatus.k141_617879                        79356  3 +    116806 I
e Lepilemur_dorsalis.k141_134267                            54094  3 +     63517 I
e Lepilemur_ankaranensis.k141_884009                        24708  3 +     39228 I
e Lemur_catta.scaffold_1                                258407958  3 - 285822530 I
e Indri_indri.k141_5141390                                   1122  3 -      3181 I
e Hapalemur_occidentalis.k141_797938                        46279  3 -     54384 I
e Hapalemur_meridionalis.k141_186231                        29651  3 -     42470 I
e Hapalemur_griseus.k141_1387522                             6402  3 +     56096 I
e Hapalemur_gilberti.k141_279011                             1076  3 -     11661 I
e Hapalemur_alaotrensis.k141_1280836                         2596  3 +     10286 I
e Galagoides_demidoff.k141_1769638                          11100  3 +     27357 I
e Galago_senegalensis.k141_964197                           14034  3 -     43889 I
e Galago_moholi.ctg555                                     211660  3 -    847004 I
e Eulemur_sanfordi.k141_186399                              16595  3 -     29447 I
e Eulemur_rufus.k141_1620292                                33869  3 +     46535 I
e Eulemur_rubriventer.k141_411740                           19131  3 +     26808 I
e Eulemur_mongoz.k141_825972                                16675  3 +     27497 I
e Eulemur_fulvus.k141_653297                                12015  3 +    109717 I
e Eulemur_flavifrons.k141_903901                             8537  3 +     60246 I
e Eulemur_coronatus.k141_3240342                            12216  3 +     36558 I
e Eulemur_collaris.k141_311830                               5742  3 -      6809 I
e Eulemur_albifrons.k141_715837                              5810  3 +     13586 I
e Daubentonia_madagascariensis.ctg11                     16845635  3 +  31942871 I
e Cricetomys_gambianus.CriGam_scaffold_949                 279183 147 -    399297 I
e Colobus_angolensis.KN985967.1                          10887472 517 +  10971483 I
e Cheirogaleus_medius.k141_133808                            8812  3 +     13308 I
e Cheirogaleus_major.k141_1157592                           59764  3 -     68416 I
e Avahi_peyrierasi.k141_798820                               1105  3 +      6337 I
e Avahi_laniger.k141_2840928                                 7489  3 -     16375 I
e Arctocebus_calabarensis.k141_587554                        1753  3 +      9265 I
e Nomascus_siki_b.tarseq_80                             25641 26 -  18771707 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               14738 62 +    209709 AGTATTTTT-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTG---GTAA------CAAACTACTATT-A
s Allenopithecus_nigroviridis.k141_2469532                   2464 62 -     60446 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTG---T---TA--A-CACACTACTATT-A
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         3181 62 -     29318 GGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTG---T---TA--A-CACACTACTATT-A
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         2117 62 +     38766 GGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTG---T---TA--A-CACACTACTATT-A
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          3075 62 -     80423 GGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTG---T---TA--A-CACACTACTATT-A
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            11046 64 -     18050 AGTATTTCC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTGTTAT---TA--A-CAAACTACTATT--
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_1710068                                762 64 +      1555 AGTATTTCC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTGTTAT---TA--A-CAAACTACTATT--
i Alouatta_caraya.k141_1710068                          C 0 C 0
s Alouatta_discolor.k141_811576                             11719 64 -     21359 AGTATTTCC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTGTTAT---TA--A-CAAACTACTATT--
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                1342 64 +      2129 AGTATTTCC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTGTTAT---TA--A-CAAACTACTATT--
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_2177643                           726 64 -      1868 AGTATTTCC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTGTTAT---TA--A-CAAACTACTATT--
i Alouatta_macconnelli.k141_2177643                     C 0 C 0
s Alouatta_nigerrima.k141_3537692                             775 64 +      1660 AGTATTTCC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTGTTAT---TA--A-CAAACTACTATT--
i Alouatta_nigerrima.k141_3537692                       C 0 C 0
s Alouatta_palliata.k141_2764429                              688 64 -      1480 AGTATTTCC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTGTTAT---TA--A-CAAACTACTATT--
i Alouatta_palliata.k141_2764429                        C 0 C 0
s Alouatta_puruensis.k141_1284840                            4768 64 -      4927 AGTATTTCC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTGTTAT---TA--A-CAAACTACTATT--
i Alouatta_puruensis.k141_1284840                       C 0 N 0
s Alouatta_seniculus.k141_1531728                             903 64 -      1692 AGTATTTCC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTGTTAT---TA--A-CAAACTACTATT--
i Alouatta_seniculus.k141_1531728                       C 0 C 0
s Aotus_azarae.k141_3170768                                 63396 61 +     78111 AGTATTTTC-AGACTG-TTTTAGATACTTCGATGAATAAATT--TTGTG---T---TA--A-CAAACTACTATT--
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            6338 61 +     22701 AGTATTTTC-AGACTG-TTTTAGATACTTCTATGAATAAATT--TTGTG---T---TA--A-CAAACTACTATT--
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5750295 61 +   9889416 agtattttc-agaCTG-TTTTAGATACTTCGATGAATAAATT--TTGTG---T---TA--A-CAAACTACTATT--
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             6884 61 -    104377 AGTATTTTC-AGACTG-TTTTAGATACTTCGATGAATAAATT--TTGTG---T---TA--A-CAAACTACTATT--
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               6886 61 +     23246 AGTATTTTC-AGACTG-TTTTAGATACTTCGATGAATAAATT--TTGTG---T---TA--A-CAAACTACTATT--
i Aotus_vociferans.k141_718647                          C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9540157 64 +  39197703 AGTATTTCC-AGAATG-GTTTAGATATTTTGATGAATAAACT--TTGTGTTAT---TA--A-CAAACTACTATT--
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             61428 64 +     85812 AGTATTTCC-AGAATG-GTTTAGATATTTTGATGAATAAACT--TTGTGTTAT---TA--A-CAAACTACTATT--
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                12441 64 +     89302 AGTATTTCC-AGAATG-GTTTAGATATTTTGATGAATAAACT--TTGTGTTAT---TA--A-CAAACTACTATT--
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             16944 64 -     58268 AGTATTTCC-AGAATG-GTTTAGATATTTTGATGAATAAACT--TTGTGTTAT---TA--A-CAAACTACTATT--
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             64936 64 +    119057 AGTATTTCC-AGAATG-GTTTAGATATTTTGATGAATAAACT--TTGTGTTAT---TA--A-CAAACTACTATT--
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               6907 64 -     25888 AGTATTTCC-AGAATG-GTTTAGATATTTTGATGAATAAACT--TTGTGTTAT---TA--A-CAAACTACTATT--
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Cacajao_ayresi.k141_724503                               114794 64 -    171031 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTGTTAT---TA--A-CAAACTACTATT--
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 13823 64 +    125063 AGTATTTTC-AGAATG-TTTTAGATACTTTGACGAATAAATT--TTGTGTTAT---TA--A-CAAACTACTATT--
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                15866 64 -    216513 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTGTTAT---TA--A-CAAACTACTATT--
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        8409 64 -    134917 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTGTTAT---TA--A-CAAACTACTATT--
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Cebus_albifrons.Contig22                               18891634 64 -  29618158 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAA--TTTTGTGTTAT---TA--A-CAAACTACTATT--
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 9178 64 -     26817 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAA--TTTTGTGTTAT---TA--A-CAAACTACTATT--
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                13421 64 +     25043 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAA--TTTTGTGTTAT---TA--A-CAAACTACTATT--
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cercocebus_atys.KQ010443.1                              6556411 63 +   6739814 agtattttc-agaatG-TTTTAGACACTTTGATGAATAAATT--TTGTG---T---TA--A-CAAACTACTATTAA
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      27885 63 +     60454 AGTATTTTC-AGAATG-TTTTAGACACTTTGATGAATAAATT--TTGTG---T---TA--A-CAAACTACTATTAA
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          3092 63 -     21101 AGTCTTTTC-AGAATG-TTTTAGACACTTTGATGAATAAATT--TTGTG---T---TA--A-CAAACTACTATTAA
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         60402 63 -    107033 AGTATTTTC-AGAATG-TTTTAGACACTTTGATGAATAAATT--TTGTG---T---TA--A-CAAACTACTATTAA
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        3281 62 -     17608 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTG---T---TA--A-CACACTACTATT-A
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                           440 62 +     45019 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTG---T---TA--A-CACACTACTATT-A
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                            524 62 +     15177 AGTATTTTC-AGAATG-TTTTAGATACTCTGATGAATAAATT--TTGTG---T---TA--A-CACACTACTATT-A
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          3324 62 +     16677 AGTATTTTC-AGAATG-TTTTAGATACTCTGATGAATAAATT--TTGTG---T---TA--A-CACACTACTATT-A
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           25493 62 +     35983 AGTATTTTC-AGAATG-TTTTAGATACTTTAATGAATAAATT--TTGTG---T---TA--A-CACACTACTATT-A
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11992022 62 +  12117833 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTG---T---TA--A-CACACTACTATT-A
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46478779 62 +  46592721 AGTATTTTC-AGAATG-TTTTAGATACTTTAATGAATAAATT--TTGTG---T---TA--A-CACACTACTATT-A
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      42334 62 -     45581 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTG---T---TA--A-CACACTACTATT-A
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       3336 62 +     35577 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTG---T---TA--A-CACACTACTATT-A
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        3109 62 -     25661 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTG---T---TA--A-CACACTACTATT-A
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        3089 62 -     17744 AGTATTTTC-AGAATG-TTTTAGATACTTTAATGAATAAATT--TTGTG---T---TA--A-CACACTACTATT-A
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        22694 62 +     37128 AGTATTTTC-AGAATG-TTTTAGATACTCTGATGAATAAATT--TTGTG---T---TA--A-CACACTACTATT-A
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Cheracebus_lucifer.k141_619653                             6451 64 -     18223 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTGTTAT---TA--A-CAAACTACTATT--
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             23469 64 +     25473 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTGTTAT---TA--A-CAAACTACTATT--
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           42509 64 +     57117 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTGTTAT---TA--A-CAAACTACTATT--
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          47188 64 +     54541 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTGTTAT---TA--A-CAAACTACTATT--
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chiropotes_israelita.k141_1189915                         71995 64 +    196370 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATACATT--TTGTG---T---TATTAACAAACTACTATT--
i Chiropotes_israelita.k141_1189915                     I 2 C 0
s Chiropotes_sagulatus.k141_773804                          16175 64 +     40510 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATACATT--TTGTG---T---TATTAACAAACTACTATT--
i Chiropotes_sagulatus.k141_773804                      I 2 C 0
s Chlorocebus_aethiops.ctg22                             15140691 62 -  15256731 GGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTG---T---TA--A-CACACTACTATT-A
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      35300 62 -     53260 GGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTG---T---TA--A-CACACTACTATT-A
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101145859 62 + 101219884 ggtattttc-agaatg-ttttagATACTTTGATGAATAAATT--TTGTG---T---TA--A-CACACTACTATT-A
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Colobus_guereza.LG08                                  147665780 62 + 156195979 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTG---T---TA--A-CACACTACTATT-A
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            17763 62 +     23629 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTG---T---TA--A-CACACTACTATT-A
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Erythrocebus_patas.Contig8                             48777870 62 -  48907691 GGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTG---T---TA--A-CACACTACTATT-A
i Erythrocebus_patas.Contig8                            C 0 C 0
s Gorilla_beringei.k141_111300                               6448 62 -     14630 AGTATTTTT-AGAATG-TTTTAGATACTCTGATGAATAAATT--TTGTG---TTAA------CAAACTACTATT-A
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119653548 62 - 195582420 agtattttt-agaatg-ttttagATACTCTGATGAATAAATT--TTGTG---TTAA------CAAACTACTATT-A
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Hoolock_leuconedys.ctg79                                      6141 56 -   7690867 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTG---T---CA--A-------ACTATT-A
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hylobates_abbotti.k141_164775                               924 54 -      2073 AGTATTTTC-AGAACG-TTTTAGATACTTTGATGAAAAAATT--TTGTG---T---CA--A-------AC--TT-A
i Hylobates_abbotti.k141_164775                         C 0 C 0
s Hylobates_agilis.k141_55853                                 509 54 -      1487 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAAAAAATT--TTGTG---T---CA--A-------AC--TT-A
i Hylobates_agilis.k141_55853                           I 84 I 87
s Hylobates_klossii.k141_285563                               659 56 +      1026 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTG---T---CA--A-------ACTATT-A
i Hylobates_klossii.k141_285563                         I 84 I 23
s Hylobates_pileatus_b.ContigUN                                 14625830 56 -  25970782 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAACT--TTGTG---T---CA--A-------ACTATT-A
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_950183                              527 54 +      2027 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAAAAAATT--TTGTG---T---CA--A-------AC--TT-A
i Hylobates_muelleri.k141_950183                        C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             34990 56 -     60944 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAACT--TTGTG---C---CA--A-------ACTATT-A
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Lagothrix_lagothricha.k141_12968                          51026 64 -    147782 AGTATTTCC-ACAATG-GTTTAGATATTTTGATGAATAAATT--TTGTGTTAT---TA--A-CAAACTACTATT--
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lophocebus_aterrimus.ctg55                             19249488 62 +  19376315 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTG---T---TA--A-CACACTACTATT-A
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Macaca_arctoides.k141_2201161                             21246 62 +     74745 AGTATTTTC-AGAATG-TTTTAGACACTTTGATGAATAAATT--TTGTG---T---TA--A-CAAACTACTATT-A
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12707706 62 +  12821369 AGTATTTTC-AGAATG-TTTTAGACACTTTGATGAATAAATT--TTGTG---T---TA--A-CAAACTACTATT-A
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                 283 62 -     26467 AGTATTTTC-AGAATG-TTTTAGACACTTTGATGAATAAATT--TTGTG---T---TA--A-CAAACTACTATT-A
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           48152 62 +     63263 AGTATTTTC-AGAATG-TTTTAGACACTTTGATGAATAAATT--TTGTG---T---TA--A-CAAACTACTATT-A
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                  262 44 -     26361 AGTATTTTC-AGAATG-TTTTAGACACTTTGATGAATAAATT--TTGT----------------------------
i Macaca_fuscata.k119_938422                            C 0 I 16
s Macaca_leonina.k141_467472                                 3437 62 -      7381 AGTATTTTC-AGAATG-TTTTAGACACTTTGATGAATAAATT--TTGTG---T---TA--A-CAAACTACTATT-A
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  46675 62 -     79256 AGTATTTTC-AGAATG-TTTTAGACACTTTGATGAATAAATT--TTGTG---T---TA--A-CAAACTACTATT-A
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196036777 62 + 196197964 agtattttc-agaatG-TTTTAGACACTTTGATGAATAAATT--TTGTG---T---TA--A-CAAACTACTATT-A
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11446943 62 +  11645122 agtattttc-agaatg-ttttagACACTTTGATGAATAAATT--TTGTG---T---TA--A-CAAACTACTATT-A
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   5629 62 -     46448 AGTATTTTC-AGAATG-TTTTAGACACTTTGATGAATAAATT--TTGTG---T---TA--A-CAAACTACTATT-A
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                3296 62 -     13212 AGTATTTTC-AGAATG-TTTTAGACACTTTGATGAATAAATT--TTGTG---T---TA--A-CAAACTACTATT-A
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 16972 62 -     55006 AGTATTTTC-AGAATG-TTTTAGACACTTTGATGAATAAATT--TTGTG---T---TA--A-CAAACTACTATT-A
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43842078 62 +  43892939 AGTATTTTC-AGAATG-TTTTAGACACTTTGATGAATAAATT--TTGTG---T---TA--A-CAAACTACTATT-A
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               18259 62 -     24607 GGTATTTTC-AGAATG-TTTTAGACACTTTGATGAATAAATT--TTGTG---T---TA--A-CAAACTACTATT-A
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               5626 62 -     27140 AGTATTTTC-AGAATG-TTTTAGACACTTTGATGAATAAATT--TTGTG---T---TA--A-CAAACTACTATT-A
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43438660 63 -  43563597 AGTATTTTC-AGAATG-TTTTAGACACTTTGATGAATAAATT--TTGTG---T---TA--A-CAAACTACTATTAA
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4451474 63 -   4543643 AGTATTTTC-AGAATG-TTTTAGACACTTTGATGAATAAATT--TTGTG---T---TA--A-CAAACTACTATTAA
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         3221 62 +     29742 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTG---T---TA--A-CACACTACTATT-A
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Nasalis_larvatus.k141_153429                               9700 62 +     48152 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTG---T---TA--A-CACACTACTATT-A
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Nomascus_annamensis.k141_224620                             295 56 -      2316 AATATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTG---T---TA--A-------ACTATT-A
i Nomascus_annamensis.k141_224620                       I 162 I 85
s Nomascus_concolor.k141_226614                              2392 56 -      5092 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTG---T---CA--A-------ACTATT-A
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_1004198                            955 56 +      1448 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTG---T---CA--A-------ACTATT-A
i Nomascus_gabriellae.k141_1004198                      C 0 C 0
s Nomascus_siki_a.k141_595747                                  3814 56 +      4512 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTG---T---CA--A-------ACTATT-A
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Pan_paniscus.CM003386.1                               127575814 62 - 205426864 agtattttt-agaatg-ttttagATACTTTGATGAATAAATT--TTGTG---TTAA------CAAACTACTATT-A
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120152968 62 - 196562556 agtattttt-agaatG-TTTTAGATACTTTGATGAATAAATT--TTGTG---TTAA------CAAACTACTATT-A
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Papio_anubis.CM001492.2                               188157458 62 - 188283584 agtattttc-agaatG-TTTTAGATACTTTGATGAATAAATT--TTGTG---T---TA--A-CACACTACTATT-A
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                               550 62 +     25005 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTG---T---TA--A-CACACTACTATT-A
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47514835 62 +  47705337 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTG---T---TA--A-CACACTACTATT-A
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 68821 62 -    104429 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTG---T---TA--A-CACACTACTATT-A
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    7354 62 +     14967 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTG---T---TA--A-CACACTACTATT-A
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 3215 62 -      7628 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTG---T---TA--A-CACACTACTATT-A
i Papio_ursinus.k141_1345919                            C 0 C 0
s Piliocolobus_badius.k141_1987485                           3229 62 -      5908 AGTATTTTC-AGAATG-TTTCAGATACTTTGATGAATAAATT--TTGTG---T---TA--A-CACACTACTATT-A
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       3847 62 -     17985 AGTATTTTC-AGAATG-TTTCAGATACTTTGATGAATAAATT--TTGTG---T---TA--A-CACACTACTATT-A
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            3214 62 +      7694 AGTATTTTC-AGAATG-TTTCAGATACTTTGATGAATAAATT--TTGTG---T---TA--A-CACACTACTATT-A
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26741698 62 +  26888534 agtattttc-agaatG-TTTCAGATACTTTGATGAATAAATT--TTGTG---T---TA--A-CACACTACTATT-A
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pithecia_albicans.k141_991845                             44632 64 -     61926 AGTATTTTC-AGAATG-TTTTAGATATTTTGATAAATAAATT--TTGTGTTAT---TA--A-CAAACTACTATT--
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        26017 64 +     78826 AGTATTTTC-AGAATG-TTTTAGATATTTTGATAAATAAATT--TTGTGTTAT---TA--A-CAAACTACTATT--
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                             10064 63 -     15800 AGTATTTTC-AGAATG-TTTTAGATATTTTGATAAATAAATT--TTGTGTTAT---TA--A--AAACTACTATT--
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        13263 63 -     16101 AGTATTTTC-AGAATG-TTTTAGATATTTTGATAAATAAATT--TTGTGTTAT---TA--A--AAACTACTATT--
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          6491 64 +      9673 AGTATTTTC-AGAATG-TTTTAGATATTTTGATAAATAAATT--TTGTGTTAT---TA--A-CAAACTACTATT--
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13475491 64 -  19735023 AGTATTTTC-AGAATG-TTTTAGATATTTTGATAAATAAATT--TTGTGTTAT---TA--A-CAAACTACTATT--
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           14394 64 -     31692 AGTATTTTC-AGAATG-TTTTAGATATTTTGATAAATAAATT--TTGTGTTAT---TA--A-CAAACTACTATT--
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       23730 64 +     44506 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTGTTAT---TA--A-CAAACTACTATT--
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        23942 64 +     67491 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTGTTAT---TA--A-CAAACTACTATT--
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      14182 64 -     98129 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTGTTAT---TA--A-CAAACTACTATT--
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     23782 64 +    147771 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTGTTAT---TA--A-CAAACTACTATT--
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                          418 64 -     43940 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTGTTAT---TA--A-CAAACTACTATT--
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          4501 64 -     55515 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTGTTAT---TA--A-CAAACTACTATT--
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         23855 64 +    152463 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTGTTAT---TA--A-CAAACTACTATT--
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       1572 64 -    119457 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTGTTAT---TA--A-CAAACTACTATT--
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         13578 64 +    134592 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTGTTAT---TA--A-CAAACTACTATT--
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          24165 64 -     75465 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTGTTAT---TA--A-CAAACTACTATT--
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              188334 60 -    373494 agtatttttcagaatg-ttttaGATACTTTGATGAATAAATT--TTGTG---T---------TAAACTACTATT-A
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19808982 59 +  19899266 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTG---T---------TAAACTACTATT-A
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               6979 62 -     15069 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTG---T---TA--A-CACACTACTATT-A
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              7094 62 +     14865 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTG---T---TA--A-CACACTACTATT-A
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Pygathrix_cinerea.k141_374971                             31082 62 +     56732 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTG---T---TA--A-CACACTACTATT-A
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6807576 62 +   6970761 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTG---T---TA--A-CACACTACTATT-A
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             6969 62 +     18040 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTG---T---TA--A-CACACTACTATT-A
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rhinopithecus_bieti.k119_554384                            1366 62 -     17045 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAACAAATT--TTGTG---T---TA--A-CACACTACTATT-A
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206378854 62 - 206558726 agtattttc-agaatG-TTTTAGATACTTTGATGAACAAATT--TTGTG---T---TA--A-CACACTACTATT-A
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44857756 62 -  45163003 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAACAAATT--TTGTG---T---TA--A-CACACTACTATT-A
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15673589 62 -  43202129 actattttc-agaatg-ttttagATACTATGATGAATAAA----TTGTGTTAT---TA--A-CAAACTACTATT--
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        5502 62 +     34089 AGTATTTTC-AGAATG-TTTTAGATACTATGATAAATAAA----TTGTGTTAT---TA--A-CAAACTACTATT--
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              5444 62 -     60842 AGTATTTTC-AGAATG-TTTTAGATACTATGATGAATAAA----TTGTGTTAT---TA--A-CAAACTACTATT--
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              5537 62 +     67014 AGTATTTTC-AGAATG-TTTTAGATACTATGATGAATAAA----TTGTGTTAT---TA--A-CAAACTACTATT--
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              5515 62 +     60816 AGTATTTTC-AGAATG-TTTTAGATACTATGATGAATAAA----TTGTGTTAT---TA--A-CAAACTACTATT--
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 5452 62 -     76454 AGTATTTTC-AGAATG-TTTTAGATACTATGATGAATAAA----TTGTGTTAT---TA--A-CAAACTACTATT--
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17342179 64 -  30362882 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAA--TTTTGTGTTAT---TA--A-CAAACTACTATT--
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         21540 64 -     62485 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAA--TTTTGTGTTAT---TA--A-CAAACTACTATT--
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Semnopithecus_entellus.k141_1572367                        4586 62 +     15331 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTG---T---TA--A-CACACTACTATT-A
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                       9961 62 +     20762 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTG---T---TA--A-CACACTACTATT-A
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         119967 62 +    130994 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTG---T---TA--A-CACACCACTATT-A
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           38745 62 +     46263 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTG---T---TA--A-CACACTACTATT-A
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     31890 62 +     42640 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTG---T---TA--A-CACACTACTATT-A
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        14912 62 +     30600 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAACTT--TTGTG---T---TA--A-CACACTACTATT-A
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        16091 56 -  13920577 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAACAAATT--TTGTG---T---CA--A-------ACTATT-A
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Theropithecus_gelada.CM009951.1                       194008986 62 - 194193292 agtattttc-agaATG-TTTTAGATACTTTCATGAATAAATT--TCGTG---T---TA--A-CACACTACTATT-A
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Trachypithecus_auratus.k141_738098                        28071 62 +     38948 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTG---T---TA--A-CACACTACTATT-A
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   21793 62 -     32910 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTATG---T---TA--A-CACACTACTATT-A
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      3205 62 -     12939 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTG---T---TA--A-CACACTACTATT-A
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       3123 62 -     14244 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTG---T---TA--A-CACACTACTATT-A
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           44520 62 -     54611 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTG---T---TA--A-CACACTACTATT-A
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        2317 62 -     11566 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTG---T---TA--A-CACACTACTACT-A
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     4500 62 -     15592 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTG---T---TA--A-CACACTACTATT-A
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          3152 62 +     14371 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTG---T---TA--A-CACACTACTATT-A
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   1439 62 +     12481 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTG---T---TA--A-CACACTACTATT-A
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        1313 62 -     24393 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTATG---T---TA--A-CACACTACTATT-A
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       6563 62 -     28054 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTATG---T---TA--A-CACACTACTATT-A
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44661347 62 -  44834318 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTATG---T---TA--A-CACACTACTATT-A
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       3663 62 +     13828 AGTATTTTC-AGAATG-TTTTAGATACTTTGATGAATAAATT--TTGTG---T---TA--A-CACACTACTATT-A
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
e Eptesicus_fuscus.JH977687.1                             4707649 150 +   6522550 I
e Macroglossus_sobrinus.MacSob_scaffold_879                701732 90 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             39528 295 -     47444 I
e Petromus_typicus.PetTyp_scaffold_33007                    14318 145 -     36578 I
e Sorex_araneus.JH798170.1                               17767158 152 -  27805282 I
e Dinomys_branickii.DinBra_scaffold_1996                   157690 69 +    228994 I
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           3483 145 -      6963 I
e Aplodontia_rufa.AprRuf_scaffold_156013                     4371 140 +      5067 I
e Oryctolagus_cuniculus.CM000803.1                      141877018 183 + 163896628 I
e Ochotona_princeps.JH802095.1                            4996729 2205 -  23139505 I
e Lepus_americanus.LepAme_scaffold_62849                    13981 183 +     22452 I
e Perognathus_longimembris.PerPac_flattened_line_19359        748 143 +     49596 I
e Dipodomys_stephensi.DipSte_scaffold_44365                 28710 144 +     28912 I
e Dipodomys_ordii.KN672545.1                              3657067 144 +   4240102 I
e Suricata_suricatta.SurSur_flattened_line_20339            28286 145 +     62062 I
e Ziphius_cavirostris.ZipCav_flattened_line_127025           7624 137 -      8775 I
e Zalophus_californianus.ZalCal_flattened_line_4097        214994 144 -    227762 I
e Vulpes_lagopus.VulLag_flattened_line_2045                139013 144 -    281493 I
e Vicugna_pacos.KN269600.1                                1525355 134 -   2331223 I
e Ursus_maritimus.KK498671.1                              6515518 144 +  28682327 I
e Uropsilus_gracilis.UroGra_scaffold_69449                   2523 5577 +     10241 I
e Tursiops_truncatus.MRVK01000923.1                      69314125 137 -  96451834 I
e Trichechus_manatus.JH594618.1                          16086044 158 +  31416278 I
e Tragulus_javanicus.TraJav_scaffold_14717                   5842 145 +     90398 I
e Tonatia_saurophila.TonSau_scaffold_3334                  136766 148 -    259118 I
e Tolypeutes_matacus.TolMat_scaffold_269431                  6220 146 +      6782 I
e Tapirus_terrestris.TapTer_scaffold_14939                  58545 149 +     99546 I
e Tapirus_indicus.TapInd_scaffold_176                      807833 149 +   1148477 I
e Tamandua_tetradactyla.TamTet_scaffold_26877               15409 152 +     45698 I
e Tadarida_brasiliensis.TadBra_scaffold_61492                 977 152 +     20549 I
e Sus_scrofa.CM000824.4                                 189272798 143 + 218635234 I
e Spilogale_gracilis.SpiGra_flattened_line_905             235523 394 -    276980 I
e Solenodon_paradoxus.SolPar_flattened_line_1012            19588 140 +    739146 I
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   33477 4053 -    114521 I
e Saiga_tatarica.SaiTat_scaffold_82192                       8645 152 +     12214 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20014 148 +    109198 I
e Rhinolophus_sinicus.LVEH01000179.1                      1788563 148 +   2252614 I
e Rangifer_tarandus.RanTarSib_scaffold_24239                16488 153 +     68503 I
e Puma_concolor.QAVW01000427.1                          131535071 144 - 161321710 I
e Pteropus_vampyrus.KN525959.1                             604641 132 -   3946241 I
e Pteropus_alecto.KB031157.1                             13246690 132 -  17261082 I
e Pteronura_brasiliensis.PteBra_flattened_line_1343        247399 144 -    344369 I
e Pteronotus_parnellii.KE867983.1                            4799 136 -     27784 I
e Procavia_capensis.ProCapCap_scaffold_149274                2467 1156 -      9567 I
e Platanista_gangetica.PlaMin_flattened_line_72990           6100 365 +     21690 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Phocoena_phocoena.PhoPho_flattened_line_11948            122013 137 -    122454 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    116508 146 -    135482 I
e Pantholops_hodgsonii.KE114631.1                         1066820 152 -   1292953 I
e Panthera_tigris.KE721879.1                              5028476 144 -   6340057 I
e Panthera_pardus.KV860323.1                              3638800 144 +  18214204 I
e Panthera_onca.PanOnc_flattened_line_1615                  35050 144 +    295523 I
e Ovis_canadensis.OviCan_scaffold_6251                      79185 152 +    140051 I
e Ovis_aries.CM001582.2                                 134077970 152 - 275406953 I
e Otocyon_megalotis.JAEUCK010005121.1                      308917 144 -    505867 I
e Orycteropus_afer.OryAfe_flattened_line_13509              60653 153 -     66828 I
e Orcinus_orca.KB316965.1                                 7225409 137 -   7562323 I
e Okapia_johnstoni.LVCL01S0017931.1                         37664 153 +     78940 I
e Odocoileus_virginianus.KZ101650.1                       1080374 155 +   1425656 I
e Odobenus_rosmarus.KB229369.1                             680267 144 -   3126709 I
e Nyctereutes_procyonoides.CAJHUB010000786.1                31633 144 +   3668941 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Neophocaena_asiaeorientalis.KZ688543.1                  3951724 137 -   4490290 I
e Neomonachus_schauinslandi.NINY01007774.1                4485600 144 -  14209539 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             5743 156 -      8794 I
e Myotis_myotis.MyoMyo_scaffold_6123                        12501 150 +     66751 I
e Myotis_lucifugus.GL429887.1                             3467258 148 -   3747815 I
e Myotis_davidii.KB114863.1                               5021180 150 +   6462685 I
e Myotis_brandtii.KE161952.1                               969756 148 +   8389877 I
e Mustela_putorius.JH417978.1                             4425088 144 -  28371801 I
e Murina_feae.MurFea_scaffold_2254                          22139 1145 -    100666 I
e Mungos_mungo.MunMun_flattened_line_8729                  145626 146 -    168139 I
e Moschus_moschiferus.MosMos_scaffold_78805                  2194 148 -     19904 I
e Mormoops_blainvillei.MorMeg_scaffold_2952                162139 149 +    265003 I
e Monodon_monoceros.MonMon_M_scaffold_5598                 147112 137 +    154973 I
e Mirounga_angustirostris.MirAng_flattened_line_8852        12210 144 -    104932 I
e Miniopterus_schreibersii.MinSch_scaffold_24116            35276 1042 +     45743 I
e Miniopterus_natalensis.LDJU01000022.1                   8210787 1042 +  10048721 I
e Micronycteris_hirsuta.MicHir_scaffold_37978               23617 149 -     32043 I
e Microgale_talazaci.MicTal_scaffold_34660                  35570 3525 -     48017 I
e Mesoplodon_bidens.MesBid_scaffold_227248                   1011 133 -      1377 I
e Mellivora_capensis.MelCap_flattened_line_15433             1720 141 -     87323 I
e Megaderma_lyra.MegLyr_scaffold_3562                       64783 239 -    234502 I
e Manis_pentadactyla.KN017078.1                             36919 151 +     58827 I
e Manis_javanica.JSZB01003966.1                            146777 149 +    252755 I
e Lycaon_pictus.CM007556.1                               11088832 145 +  39895028 I
e Loxodonta_africana.GL010040.1                          20595521 159 -  62548349 I
e Lipotes_vexillifer.KE558548.1                            136684 137 +   3060487 I
e Leptonychotes_weddellii.KB714749.1                      3086694 144 -   3498232 I
e Lasiurus_borealis.LasBor_scaffold_59542                    4392 78 +     26176 I
e Kogia_breviceps.KogBre_flattened_line_35920               24334 131 +     37189 I
e Inia_geoffrensis.IniGeo_flattened_line_66725               9727 138 +     17520 I
e Hyaena_hyaena.HyaHya_flattened_line_20729                 18007 140 -     67322 I
e Hipposideros_galeritus.HipGal_scaffold_345408               110 148 -       919 I
e Hipposideros_armiger.JXIK01001085.1                      279109 148 -    477199 I
e Hippopotamus_amphibius.HipAmp_scaffold_1308              147822 141 +    277961 I
e Heterohyrax_brucei.HetBruBak_scaffold_25354               61360 1157 +     73687 I
e Hemitragus_hylocrius.HemHyl_scaffold_16669                28179 152 -     91191 I
e Helogale_parvula.HelPar_flattened_line_22962              17931 144 +     53719 I
e Giraffa_tippelskirchi.LVKQ01S012154.1                    181936 151 -    189561 I
e Felis_nigripes.FelNig_flattened_line_8080                 21907 144 +     52776 I
e Felis_catus_fca126.CM031420.1                         129280767 144 - 158578461 I
e Eubalaena_japonica.EubJap_flattened_line_7756             62191 134 +     89355 I
e Eschrichtius_robustus.EscRob_flattened_line_685          315738 131 +    330699 I
e Equus_przewalskii.ATBW01073585.1                          13681 352 +     92910 I
e Equus_caballus.CM000402.2                              13352192 351 +  41866177 I
e Equus_asinus.JREZ01000062.1                             5853687 356 -   7175178 I
e Enhydra_lutris.KZ291749.1                              85872908 144 +  99434291 I
e Elephantulus_edwardii.JH947210.1                        7829418 153 +  15467074 I
e Elaphurus_davidianus.JRFZ01086400.1                     1492159 152 +   1727528 I
e Eidolon_helvum.KE772537.1                                 12958 144 +     24177 I
e Echinops_telfairi.JH980316.1                           22999622 301 -  44670279 I
e Diceros_bicornis.DicBicMic_scaffold_9545                   3899 148 +    151128 I
e Dicerorhinus_sumatrensis.PEKH010003161.1                 323247 148 +    993696 I
e Desmodus_rotundus.KZ672188.1                           18699712 150 -  18957592 I
e Delphinapterus_leucas.KZ290064.1                       80037522 137 -  96802777 I
e Dasypus_novemcinctus.JH568778.1                          184336 138 -   6883506 I
e Cryptoprocta_ferox.CryFer_flattened_line_19014            52733 145 -     70449 I
e Crocidura_indochinensis.CroInd_scaffold_848148              245 143 +      1327 I
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1008 325 -      5782 I
e Condylura_cristata.JH655880.1                          60615058 5327 +  78930452 I
e Choloepus_hoffmanni.KN194586.1                           762487 156 +    964067 I
e Choloepus_didactylus.ChoDid_scaffold_36182                17182 156 -     21363 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_160623         4352 148 -      9338 I
e Catagonus_wagneri.CatWag_scaffold_1305                   159571 139 -    276539 I
e Carollia_perspicillata.CarPer_scaffold_4436               60428 148 +     67245 I
e Capra_hircus.CM004562.1                               135707122 152 - 157403528 I
e Capra_aegagrus.CM003214.1                              21325894 152 + 157394656 I
e Canis_lupus_orion.HG994411.1                           16456391 144 -  44759192 I
e Canis_lupus_familiaris.chr31                           11089376 145 +  39895921 I
e Canis_lupus_dingo.QKWQ01001993.1                       11266842 145 -  35597290 I
e Canis_lupus_VD.CanFam_VD_scaffold_16982                   15201 144 +     87036 I
e CanFam4.chr31                                          11520175 145 +  39901454 I
e Camelus_ferus.KB016973.1                                2973688 134 +   6889770 I
e Camelus_dromedarius.KN271192.1                           397952 134 -  15254737 I
e Camelus_bactrianus.KN276303.1                           3220251 134 -   8989139 I
e Bubalus_bubalis.KI419065.1                              1233473 152 -   1914593 I
e Bos_taurus.CM000177.6                                 136296393 150 - 158972876 I
e Bos_mutus.JH883513.1                                     573201 150 -    998990 I
e Bos_indicus.CM003021.1                                138140660 150 - 161108492 I
e Bison_bison.KN264915.1                                  6560545 150 +   6870073 I
e Beatragus_hunteri.BeaHun_scaffold_21644                   43929 148 -     72089 I
e Balaenoptera_bonaerensis.DF502048.1                        6070 131 -     13118 I
e Balaenoptera_acutorostrata.KI537095.1                  26380898 131 +  51448160 I
e Artibeus_jamaicensis.ArtJam_scaffold_41619                 9641 145 -     29036 I
e Antilocapra_americana.AntAmePen_scaffold_42841            31400 152 +     33004 I
e Anoura_caudifer.AnoCau_scaffold_422                      391221 148 -    631301 I
e Ammotragus_lervia.NIVO01013474.1                        3520819 152 +   4113121 I
e Ailurus_fulgens.LNAC01000003.1                          7095384 143 -  16596857 I
e Ailuropoda_melanoleuca.LNAT01000321.1                  10658031 144 +  23371972 I
e Acinonyx_jubatus.LLWD01000356.1                         2034711 144 +   3721120 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19677 266 -    119109 I
e Glis_glis.GliGli_scaffold_79770                           14463 152 -     18683 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     16536 153 -     20485 I
e Jaculus_jaculus.JH725517.1                              8566637 149 +  11848649 I
e Allactaga_bullata.AllBul_scaffold_70162                   17626 147 -     22067 I
e Galeopterus_variegatus.GalVar_scaffold_354               157007 139 +    324696 I
e Microtus_ochrogaster.CM001673.1                        22820377 122 -  98408828 I
e Xerus_inauris.XerIna_scaffold_7898                       127580 141 -    134049 I
e Varecia_variegata.k141_775891                             25501  3 -     33872 I
e Varecia_rubra.k141_432109                                  5966  3 -     20643 I
e Tupaia_tana.TupTan_flattened_line_68454                    6200 129 +     13056 I
e Tupaia_chinensis.KB320831.1                             2794010 238 -   3938065 I
e Tarsius_wallacei.k141_48636                               60532 3805 +     65473 I
e Tarsius_lariang.k141_609102                               27216 3812 +     42269 I
e Spermophilus_dauricus.KZ294190.1                        2240462 141 +   2842873 I
e Sigmodon_hispidus.SigHis_scaffold_11332                  100998 122 -    120886 I
e Rattus_norvegicus.chr11                                13915860 1475 +  90463843 I
e Psammomys_obesus.NESX01026517.1                           36232 122 +     77221 I
e Propithecus_verreauxi.k141_158021                         39953  3 -     48185 I
e Propithecus_tattersalli.k141_907138                       17689  3 -     53241 I
e Propithecus_perrieri.k141_7554                            18055  3 +     27322 I
e Propithecus_edwardsi.k141_1317105                         36132  3 -     44753 I
e Propithecus_diadema.k141_577245                           43745  3 +     52369 I
e Propithecus_coronatus.k141_1353159                         4402  3 +     11805 I
e Propithecus_coquerelli.NW_012147863.1                     19492  3 -     30946 I
e Prolemur_simus.MPIZ01000048.1                           6849325  3 +  12164890 I
e Peromyscus_maniculatus.KI615518.1                       4951147 122 -   8017169 I
e Perodicticus_potto.k141_713187                            25474  3 -     27972 I
e Perodicticus_ibeanus.k141_117958                           6160  3 -     23713 I
e Otolemur_garnettii.GL873528.1                          18009456  3 -  38779656 I
e Otolemur_crassicaudatus.k141_505435                        1475  3 -     53940 I
e Onychomys_torridus.OnyTor_scaffold_12578                  37821 122 +     62360 I
e Ondatra_zibethicus.OndZib_scaffold_6821                  125630 120 +    145789 I
e Octodon_degus.JH651621.1                                3686571 159 +  10294119 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65670190  0 +  89412551 C
e Nycticebus_coucang.k141_2051882                            4581  0 +      6470 C
e Nycticebus_bengalensis.LG16                            65567855  0 -  95554990 C
e Nannospalax_galili.KL201303.1                            119159  6 +    362372 I
e Myocastor_coypus.MyoCoy_scaffold_3653                     91077 157 -    117718 I
e Muscardinus_avellanarius.MusAve_scaffold_9643             12967 157 +     98495 I
e Mus_spretus.CM004110.1                                 74333152 260 +  97876770 I
e Mus_pahari.LT608305.1                                  67556620 256 +  89017189 I
e Mus_musculus.chr16                                     75490417 259 +  98207768 I
e Mus_caroli.LT608236.1                                  70767340 259 +  92629107 I
e Mirza_zaza.k141_226143                                     6369  3 +      8497 I
e Microcebus_murinus.CM007691.1                          16510980  3 +  47401472 I
e Mesocricetus_auratus.KB708139.1                         1047652 119 -  26018355 I
e Meriones_unguiculatus.MerUng_scaffold_52233               13942 122 +     15977 I
e Marmota_marmota.CZRN01000005.1                         36874362 245 +  64221397 I
e Loris_tardigradus.ctg97                                 3779150  0 +   6799190 C
e Loris_lydekkerianus.k141_550999                           11401  0 +     84689 C
e Lepilemur_septentrionalis.k141_578524                     32347  3 -     33031 I
e Lepilemur_ruficaudatus.k141_617879                        79356  3 +    116806 I
e Lepilemur_dorsalis.k141_134267                            54094  3 +     63517 I
e Lepilemur_ankaranensis.k141_884009                        24708  3 +     39228 I
e Lemur_catta.scaffold_1                                258407958  3 - 285822530 I
e Indri_indri.k141_5141390                                   1122  3 -      3181 I
e Ictidomys_tridecemlineatus.JH393315.1                   7126546 141 +  13083262 I
e Hystrix_cristata.HysCri_scaffold_50788                     6849 158 +     22540 I
e Heterocephalus_glaber.JH602058.1                        2551783 155 +  31725842 I
e Hapalemur_occidentalis.k141_797938                        46279  3 -     54384 I
e Hapalemur_meridionalis.k141_186231                        29651  3 -     42470 I
e Hapalemur_griseus.k141_1387522                             6402  3 +     56096 I
e Hapalemur_gilberti.k141_279011                             1076  3 -     11661 I
e Hapalemur_alaotrensis.k141_1280836                         2596  3 +     10286 I
e Graphiurus_murinus.GraMur_scaffold_4493                   77885 146 +    118900 I
e Galagoides_demidoff.k141_1769638                          11100  3 +     27357 I
e Galago_senegalensis.k141_964197                           14034  3 -     43889 I
e Galago_moholi.ctg555                                     211660  3 -    847004 I
e Fukomys_damarensis.KN123630.1                          13892149 71 -  19261668 I
e Eulemur_sanfordi.k141_186399                              16595  3 -     29447 I
e Eulemur_rufus.k141_1620292                                33869  3 +     46535 I
e Eulemur_rubriventer.k141_411740                           19131  3 +     26808 I
e Eulemur_mongoz.k141_825972                                16675  3 +     27497 I
e Eulemur_fulvus.k141_653297                                12015  3 +    109717 I
e Eulemur_flavifrons.k141_903901                             8537  3 +     60246 I
e Eulemur_coronatus.k141_3240342                            12216  3 +     36558 I
e Eulemur_collaris.k141_311830                               5742  3 -      6809 I
e Eulemur_albifrons.k141_715837                              5810  3 +     13586 I
e Ellobius_talpinus.LOJH01090055.1                           7187 122 -      7838 I
e Ellobius_lutescens.LOEQ01003611.1                        240062 122 -    369425 I
e Dolichotis_patagonum.DolPat_scaffold_14102                36772 276 -     73477 I
e Daubentonia_madagascariensis.ctg11                     16845635  3 +  31942871 I
e Dasyprocta_punctata.DasPun_flattened_line_634             59553 276 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                18462 277 +     26546 I
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 31752 154 -     67205 I
e Ctenodactylus_gundi.CteGun_scaffold_447                  209131 166 -    956709 I
e Cricetulus_griseus.LT883672.1                          53029979 121 +  72327488 I
e Cricetomys_gambianus.CriGam_scaffold_949                 279183 147 -    399297 I
e Colobus_angolensis.KN985967.1                          10887472 517 +  10971483 I
e Chinchilla_lanigera.JH721867.1                         15962421 137 +  43084221 I
e Cheirogaleus_medius.k141_133808                            8812  3 +     13308 I
e Cheirogaleus_major.k141_1157592                           59764  3 -     68416 I
e Cephalopachus_bancanus.k141_702587                         8788 3391 +     21754 I
e Cavia_tschudii.CavTsc_scaffold_488                       177453 271 +    436027 I
e Cavia_porcellus.DS562889.1                             15799262 290 -  24440124 I
e Cavia_aperea.AVPZ01000278.1                            15787326 288 -  24422027 I
e Castor_canadensis.CasCan_scaffold_47037                   31790 150 +     33760 I
e Carlito_syrichta.NW_007248099.1                          309764 3411 +    345090 I
e Avahi_peyrierasi.k141_798820                               1105  3 +      6337 I
e Avahi_laniger.k141_2840928                                 7489  3 -     16375 I
e Arctocebus_calabarensis.k141_587554                        1753  3 +      9265 I
e Acomys_cahirinus.AcoCah_scaffold_1625                    113481 121 -    189883 I
e Nomascus_siki_b.tarseq_80                             25641 26 -  18771707 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               14800 15 +    209709 AAAAAACTT----AT----AAAT
s Allenopithecus_nigroviridis.k141_2469532                   2526 15 -     60446 AAAAATCTT----AC----AGGT
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         3243 15 -     29318 AAAAATCTT----AC----AGGT
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         2179 15 +     38766 AAAAATCTT----AC----AGGT
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          3137 15 -     80423 AAAAATCTT----AC----AGGT
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            11110 15 -     18050 AAAAAACAT----AT----AGGT
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_1710068                                826 15 +      1555 AAAAAACAT----AT----AGGT
i Alouatta_caraya.k141_1710068                          C 0 C 0
s Alouatta_discolor.k141_811576                             11783 15 -     21359 AAAAAACAT----AT----AGGT
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                1406 15 +      2129 AAAAAACAT----AT----AGGT
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_2177643                           790 15 -      1868 AAAAAACAT----AT----AGGT
i Alouatta_macconnelli.k141_2177643                     C 0 C 0
s Alouatta_nigerrima.k141_3537692                             839 15 +      1660 AAAAAACAT----AT----AGGT
i Alouatta_nigerrima.k141_3537692                       C 0 C 0
s Alouatta_palliata.k141_2764429                              752 15 -      1480 AAAAAACAT----AT----AGGT
i Alouatta_palliata.k141_2764429                        C 0 C 0
s Alouatta_puruensis.k141_131505                               46 15 +      4855 AAAAAACAT----AT----AGGT
i Alouatta_puruensis.k141_131505                        N 0 C 0
s Alouatta_seniculus.k141_1531728                             967 15 -      1692 AAAAAACAT----AT----AGGT
i Alouatta_seniculus.k141_1531728                       C 0 C 0
s Aotus_azarae.k141_3170768                                 63457 15 +     78111 AAAAAACGT----AT----AAGT
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            6399 15 +     22701 AAAAAACTT----AT----AAGT
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5750356 15 +   9889416 AAAAAACTT----CT----GAGT
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             6945 15 -    104377 AAAAAACGT----AT----AAGT
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               6947 15 +     23246 AAAAAACTT----CT----GAGT
i Aotus_vociferans.k141_718647                          C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9540221 15 +  39197703 AAAAAACTT----AT----AGGT
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             61492 15 +     85812 AAAAAACTT----AT----AGGT
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                12505 15 +     89302 AAAAAACTT----AT----AGGT
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             17008 15 -     58268 AAAAAACTT----AT----AGGT
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             65000 15 +    119057 AAAAAACTT----AT----AGGT
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               6971 15 -     25888 AAAAAACTT----AT----AGGT
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Cacajao_ayresi.k141_724503                               114858 15 -    171031 AAAAAACTT----AT----AGGT
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 13887 15 +    125063 AAAAAACTT----AT----AGGT
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                15930 15 -    216513 AAAAAACTT----AT----AGGT
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        8473 15 -    134917 AAAAAACTT----AT----AGGT
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Cebus_albifrons.Contig22                               18891698 15 -  29618158 AAAAAACTT----GT----AAGT
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 9242 15 -     26817 AAAAAACTT----GT----AAGT
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                13485 15 +     25043 AAAAAACTT----GT----AAGT
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cercocebus_atys.KQ010443.1                              6556474 14 +   6739814 -AAAAACTT----AC----AGGT
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      27948 14 +     60454 -AAAAACTT----AC----AGGT
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          3155 14 -     21101 -AAAAACTT----AC----AGGT
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         60465 14 -    107033 -AAAAACTT----AC----AGGT
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        3343 15 -     17608 AAAAATCTT----AC----AGGT
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                           502 15 +     45019 AAAAATCTT----AC----AGGT
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                            586 15 +     15177 AAAAATCTT----AC----AGGT
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          3386 15 +     16677 AAAAATCTT----AC----AGGT
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           25555 15 +     35983 AAAAATCTT----AC----AGGT
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11992084 15 +  12117833 AAAAATCTT----AC----AGGT
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46478841 15 +  46592721 AAAAATCTT----AC----AGGT
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      42396 15 -     45581 AAAAATCTT----AC----AGGT
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       3398 15 +     35577 AAAAATCTT----AC----AGGT
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        3171 15 -     25661 AAAAATCTT----AC----AGGT
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        3151 15 -     17744 AAAAATCTT----AC----AGGT
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        22756 15 +     37128 AAAAATCTT----AC----AGGT
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Cheracebus_lucifer.k141_619653                             6515 15 -     18223 AAAAAACTT----AT----AGGT
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             23533 15 +     25473 AAAAAACTT----AT----AGGT
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           42573 15 +     57117 AAAAAACTT----AT----AGGT
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          47252 15 +     54541 AAAAAACTT----AT----AGGT
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chiropotes_israelita.k141_1189915                         72059 15 +    196370 AAAAAACTT----AT----AGGT
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          16239 15 +     40510 AAAAAACTT----AT----AGGT
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15140753 15 -  15256731 AAAAATCTT----AC----AGGT
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      35362 15 -     53260 AAAAATCTT----AC----AGGT
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101145921 15 + 101219884 AAAAATCTT----AC----AGGT
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Colobus_guereza.LG08                                  147665842 14 + 156195979 -AAAAACTT----AC----AGGT
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            17825 14 +     23629 -AAAAACTT----AC----AGGT
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Erythrocebus_patas.Contig8                             48777932 15 -  48907691 AAAAATCTT----AC----AGGT
i Erythrocebus_patas.Contig8                            C 0 C 0
s Gorilla_beringei.k141_111300                               6510 15 -     14630 AAAAAACTT----AT----AGGT
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119653610 15 - 195582420 AAAAAACTT----AT----AGGT
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Hoolock_leuconedys.ctg79                                      6197 15 -   7690867 AAAAAACTT----AT----AGGT
i Hoolock_leuconedys.ctg79                                 C 0 I 8
s Hylobates_abbotti.k141_164775                               978 15 -      2073 AAAAAACTT----GT----AGGT
i Hylobates_abbotti.k141_164775                         C 0 C 0
s Hylobates_agilis.k141_1621614                              1007 15 -      1673 AAAAAACTT----AT----AGGT
i Hylobates_agilis.k141_1621614                         I 56 I 358
s Hylobates_klossii.k141_183401                               533 15 -      1272 AAAAAACTT----AT----AGGT
i Hylobates_klossii.k141_183401                         I 179 C 0
s Hylobates_pileatus_b.ContigUN                                 14625886 15 -  25970782 AAAAAACTT----AT----AGGT
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_950183                              581 15 +      2027 AAAAAACTT----GT----AGGT
i Hylobates_muelleri.k141_950183                        C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             35046 15 -     60944 AAAAAACTT----AT----AGGT
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Lagothrix_lagothricha.k141_12968                          51090 15 -    147782 AAAAAACTT----AT----AGGT
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lophocebus_aterrimus.ctg55                             19249550 15 +  19376315 -AAAA---C----ACTTACAGGT
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Macaca_arctoides.k141_2201161                             21308 14 +     74745 -AAAAACTT----AC----AGGT
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12707768 14 +  12821369 -AAAAACTT----AC----AGGT
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                 345 15 -     26467 AAAAAACTT----AC----AGGT
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           48214 15 +     63263 AAAAAACTT----AC----AGGT
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                  322 15 -     26361 AAAAAACTT----AC----AGGT
i Macaca_fuscata.k119_938422                            I 16 C 0
s Macaca_leonina.k141_467472                                 3499 15 -      7381 AAAAAACTT----AC----AGGT
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  46737 15 -     79256 AAAAAACTT----AC----AGGT
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196036839 15 + 196197964 AAAAAACTT----AC----AGGT
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11447005 15 +  11645122 AAAAAACTT----AC----AGGT
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   5691 15 -     46448 AAAAAACTT----AC----AGGT
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                3358 14 -     13212 -AAAAACTT----AC----AGGT
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 17034 15 -     55006 AAAAAACTT----AC----AGGT
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43842140 15 +  43892939 AAAAAACTT----AC----AGGT
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               18321 15 -     24607 AAAAAACTT----AC----AGGT
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               5688 15 -     27140 AAAAAACTT----AC----AGGT
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43438723 14 -  43563597 -AAAAACTT----AC----AGGT
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4451537 14 -   4543643 -AAAAACTT----AC----AGGT
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         3283 15 +     29742 AAAAATCTT----AC----AGGT
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Nasalis_larvatus.k141_153429                               9762 14 +     48152 -AAAAACTT----AC----AGGT
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Nomascus_annamensis.k141_220265                            1658 15 +      1763 AAAAAACTT----CT----AGGT
i Nomascus_annamensis.k141_220265                       I 56 C 0
s Nomascus_concolor.k141_226614                              2448 15 -      5092 AAAAAACTT----CT----AGGT
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_1004198                           1011 15 +      1448 AAAAAACTT----AT----AGGT
i Nomascus_gabriellae.k141_1004198                      C 0 I 72
s Nomascus_siki_b.tarseq_80                             25667  1 -  18771707 ----------------------t
i Nomascus_siki_b.tarseq_80                         I 26 C 0
s Nomascus_siki_a.k141_595747                                  3870 15 +      4512 AAAAAACTT----AT----AGGT
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Pan_paniscus.CM003386.1                               127575876 12 - 205426864 AAAAAACTT----AT----A---
i Pan_paniscus.CM003386.1                               C 0 I 480
s Pan_troglodytes.CM009241.2                            120153030 12 - 196562556 AAAAAACTT----AT----A---
i Pan_troglodytes.CM009241.2                            C 0 I 480
s Papio_anubis.CM001492.2                               188157520 11 - 188283584 -AAAA---C----AC----AGGT
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                               612 11 +     25005 -AAAA---C----AC----AGGT
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47514897 11 +  47705337 -AAAA---C----AC----AGGT
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 68883 15 -    104429 -AAAA---CACTTAC----AGGT
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    7416 11 +     14967 -AAAA---C----AC----AGGT
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 3277 15 -      7628 -AAAA---CACTTAC----AGGT
i Papio_ursinus.k141_1345919                            C 0 C 0
s Piliocolobus_badius.k141_1987485                           3291 14 -      5908 -AAAAACTT----AC----AGGT
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       3909 14 -     17985 -AAAAACTT----AC----AGGT
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            3276 14 +      7694 -AAAAACTT----AC----AGGT
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26741760 14 +  26888534 -AAAAACTT----AC----AGGT
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pithecia_albicans.k141_991845                             44696 15 -     61926 AAAAAACTT----AT----AGGT
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        26081 15 +     78826 AAAAAACTT----AT----AGGT
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                             10127 15 -     15800 AAAAAACTT----AT----AGGT
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        13326 15 -     16101 AAAAAACTT----AT----AGGT
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          6555 15 +      9673 AAAAAACTT----AT----AGGT
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13475555 15 -  19735023 AAAAAACTT----AT----AGGT
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           14458 15 -     31692 AAAAAACTT----AT----AGGT
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       23794 15 +     44506 AAAAAACTT----AT----AGGT
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        24006 15 +     67491 AAAAAACTT----AT----AGGT
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      14246 15 -     98129 AAAAAACTT----AT----AGGT
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     23846 15 +    147771 AAAAAACTT----AT----AGGT
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                          482 15 -     43940 AAAAAACTT----AT----AGGT
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          4565 15 -     55515 AAAAAACTT----AT----AGGT
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         23919 15 +    152463 AAAAAACTT----AT----AGGT
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       1636 15 -    119457 AAAAAACTT----AT----AGGT
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         13642 15 +    134592 AAAAAACTT----AT----AGGT
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          24229 15 -     75465 AAAAAACTT----AT----AGGT
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              188394 15 -    373494 AAAAAACTT----AT----AGGT
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19809041 15 +  19899266 AAAAAACTT----AT----AGGT
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               7041 14 -     15069 -AAAAACTT----AC----AGGT
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              7156 14 +     14865 -AAAAACTT----AC----AAGT
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Pygathrix_cinerea.k141_374971                             31144 14 +     56732 -AAAAACTT----AC----AGGT
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6807638 14 +   6970761 -AAAAACTT----AC----AGGT
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             7031 14 +     18040 -AAAAACTT----AC----AGGT
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rhinopithecus_bieti.k119_554384                            1428 14 -     17045 -AAAAACTT----AC----AGGT
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206378916 14 - 206558726 -AAAAACTT----AC----AGGT
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44857818 14 -  45163003 -AAAAACTT----AC----AGGT
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15673651  7 -  43202129 TAAAAAC----------------
i Saimiri_boliviensis.NW_024100938.1                    C 0 I 1
s Saimiri_cassiquiarensis.k141_808270                        5564  7 +     34089 TAAAAAC----------------
i Saimiri_cassiquiarensis.k141_808270                   C 0 I 1
s Saimiri_macrodon.k141_2087127                              5506  7 -     60842 TAAAAAC----------------
i Saimiri_macrodon.k141_2087127                         C 0 I 1
s Saimiri_oerstedii.k141_841116                              5599  7 +     67014 TAAAAAC----------------
i Saimiri_oerstedii.k141_841116                         C 0 I 1
s Saimiri_sciureus.k141_1947592                              5577  7 +     60816 TAAAAAC----------------
i Saimiri_sciureus.k141_1947592                         C 0 I 1
s Saimiri_ustus.k141_1282476                                 5514  7 -     76454 TAAAAAC----------------
i Saimiri_ustus.k141_1282476                            C 0 I 1
s Sapajus_apella.ctg10                                   17342243 15 -  30362882 AAAAAACTT----GT----AAGT
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         21604 15 -     62485 AAAAAACTT----GT----AAGT
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Semnopithecus_entellus.k141_1572367                        4648 14 +     15331 -AAAAACTT----AC----AGGT
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      10023 14 +     20762 -AAAAACTT----AC----AGGT
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         120029 14 +    130994 -AAAAACTT----AC----AGGT
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           38807 14 +     46263 -AAAAACTT----AC----AGGT
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     31952 14 +     42640 -AAAAACTT----AC----AGGT
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        14974 14 +     30600 -AAAAACTT----AC----AGGT
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        16147 15 -  13920577 AAAAAACTT----AT----AGGT
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Theropithecus_gelada.CM009951.1                       194009048 11 - 194193292 -AAAA---C----AC----AGGT
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Trachypithecus_auratus.k141_738098                        28133 14 +     38948 -AAAAACTT----AC----AGGT
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   21855 14 -     32910 -AAAATCTT----AC----AGGT
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      3267 14 -     12939 -AAAAACTT----AC----AGGT
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       3185 14 -     14244 -AAAAACTT----AC----AGGT
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           44582 14 -     54611 -AAAAACTT----AC----AGGT
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        2379 14 -     11566 -AAAAACTT----AC----AGGT
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     4562 14 -     15592 -AAAAACTT----AC----AGGT
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          3214 14 +     14371 -AAAAACTT----AC----AGGT
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   1501 14 +     12481 -AAAAACTT----AC----AGGT
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        1375 14 -     24393 -AAAAACTT----AC----AGGT
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       6625 14 -     28054 -AAAAACTT----AC----AGGT
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44661409 14 -  44834318 -AAAATCTT----AC----AGGT
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       3725 14 +     13828 -AAAAACTT----AC----AGGT
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
e Eptesicus_fuscus.JH977687.1                             4707649 150 +   6522550 I
e Macroglossus_sobrinus.MacSob_scaffold_879                701732 90 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             39528 295 -     47444 I
e Petromus_typicus.PetTyp_scaffold_33007                    14318 145 -     36578 I
e Sorex_araneus.JH798170.1                               17767158 152 -  27805282 I
e Dinomys_branickii.DinBra_scaffold_1996                   157690 69 +    228994 I
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           3483 145 -      6963 I
e Aplodontia_rufa.AprRuf_scaffold_156013                     4371 140 +      5067 I
e Oryctolagus_cuniculus.CM000803.1                      141877018 183 + 163896628 I
e Ochotona_princeps.JH802095.1                            4996729 2205 -  23139505 I
e Lepus_americanus.LepAme_scaffold_62849                    13981 183 +     22452 I
e Perognathus_longimembris.PerPac_flattened_line_19359        748 143 +     49596 I
e Dipodomys_stephensi.DipSte_scaffold_44365                 28710 144 +     28912 I
e Dipodomys_ordii.KN672545.1                              3657067 144 +   4240102 I
e Suricata_suricatta.SurSur_flattened_line_20339            28286 145 +     62062 I
e Ziphius_cavirostris.ZipCav_flattened_line_127025           7624 137 -      8775 I
e Zalophus_californianus.ZalCal_flattened_line_4097        214994 144 -    227762 I
e Vulpes_lagopus.VulLag_flattened_line_2045                139013 144 -    281493 I
e Vicugna_pacos.KN269600.1                                1525355 134 -   2331223 I
e Ursus_maritimus.KK498671.1                              6515518 144 +  28682327 I
e Uropsilus_gracilis.UroGra_scaffold_69449                   2523 5577 +     10241 I
e Tursiops_truncatus.MRVK01000923.1                      69314125 137 -  96451834 I
e Trichechus_manatus.JH594618.1                          16086044 158 +  31416278 I
e Tragulus_javanicus.TraJav_scaffold_14717                   5842 145 +     90398 I
e Tonatia_saurophila.TonSau_scaffold_3334                  136766 148 -    259118 I
e Tolypeutes_matacus.TolMat_scaffold_269431                  6220 146 +      6782 I
e Tapirus_terrestris.TapTer_scaffold_14939                  58545 149 +     99546 I
e Tapirus_indicus.TapInd_scaffold_176                      807833 149 +   1148477 I
e Tamandua_tetradactyla.TamTet_scaffold_26877               15409 152 +     45698 I
e Tadarida_brasiliensis.TadBra_scaffold_61492                 977 152 +     20549 I
e Sus_scrofa.CM000824.4                                 189272798 143 + 218635234 I
e Spilogale_gracilis.SpiGra_flattened_line_905             235523 394 -    276980 I
e Solenodon_paradoxus.SolPar_flattened_line_1012            19588 140 +    739146 I
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   33477 4053 -    114521 I
e Saiga_tatarica.SaiTat_scaffold_82192                       8645 152 +     12214 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20014 148 +    109198 I
e Rhinolophus_sinicus.LVEH01000179.1                      1788563 148 +   2252614 I
e Rangifer_tarandus.RanTarSib_scaffold_24239                16488 153 +     68503 I
e Puma_concolor.QAVW01000427.1                          131535071 144 - 161321710 I
e Pteropus_vampyrus.KN525959.1                             604641 132 -   3946241 I
e Pteropus_alecto.KB031157.1                             13246690 132 -  17261082 I
e Pteronura_brasiliensis.PteBra_flattened_line_1343        247399 144 -    344369 I
e Pteronotus_parnellii.KE867983.1                            4799 136 -     27784 I
e Procavia_capensis.ProCapCap_scaffold_149274                2467 1156 -      9567 I
e Platanista_gangetica.PlaMin_flattened_line_72990           6100 365 +     21690 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Phocoena_phocoena.PhoPho_flattened_line_11948            122013 137 -    122454 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    116508 146 -    135482 I
e Pantholops_hodgsonii.KE114631.1                         1066820 152 -   1292953 I
e Panthera_tigris.KE721879.1                              5028476 144 -   6340057 I
e Panthera_pardus.KV860323.1                              3638800 144 +  18214204 I
e Panthera_onca.PanOnc_flattened_line_1615                  35050 144 +    295523 I
e Ovis_canadensis.OviCan_scaffold_6251                      79185 152 +    140051 I
e Ovis_aries.CM001582.2                                 134077970 152 - 275406953 I
e Otocyon_megalotis.JAEUCK010005121.1                      308917 144 -    505867 I
e Orycteropus_afer.OryAfe_flattened_line_13509              60653 153 -     66828 I
e Orcinus_orca.KB316965.1                                 7225409 137 -   7562323 I
e Okapia_johnstoni.LVCL01S0017931.1                         37664 153 +     78940 I
e Odocoileus_virginianus.KZ101650.1                       1080374 155 +   1425656 I
e Odobenus_rosmarus.KB229369.1                             680267 144 -   3126709 I
e Nyctereutes_procyonoides.CAJHUB010000786.1                31633 144 +   3668941 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Neophocaena_asiaeorientalis.KZ688543.1                  3951724 137 -   4490290 I
e Neomonachus_schauinslandi.NINY01007774.1                4485600 144 -  14209539 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             5743 156 -      8794 I
e Myotis_myotis.MyoMyo_scaffold_6123                        12501 150 +     66751 I
e Myotis_lucifugus.GL429887.1                             3467258 148 -   3747815 I
e Myotis_davidii.KB114863.1                               5021180 150 +   6462685 I
e Myotis_brandtii.KE161952.1                               969756 148 +   8389877 I
e Mustela_putorius.JH417978.1                             4425088 144 -  28371801 I
e Murina_feae.MurFea_scaffold_2254                          22139 1145 -    100666 I
e Mungos_mungo.MunMun_flattened_line_8729                  145626 146 -    168139 I
e Moschus_moschiferus.MosMos_scaffold_78805                  2194 148 -     19904 I
e Mormoops_blainvillei.MorMeg_scaffold_2952                162139 149 +    265003 I
e Monodon_monoceros.MonMon_M_scaffold_5598                 147112 137 +    154973 I
e Mirounga_angustirostris.MirAng_flattened_line_8852        12210 144 -    104932 I
e Miniopterus_schreibersii.MinSch_scaffold_24116            35276 1042 +     45743 I
e Miniopterus_natalensis.LDJU01000022.1                   8210787 1042 +  10048721 I
e Micronycteris_hirsuta.MicHir_scaffold_37978               23617 149 -     32043 I
e Microgale_talazaci.MicTal_scaffold_34660                  35570 3525 -     48017 I
e Mesoplodon_bidens.MesBid_scaffold_227248                   1011 133 -      1377 I
e Mellivora_capensis.MelCap_flattened_line_15433             1720 141 -     87323 I
e Megaderma_lyra.MegLyr_scaffold_3562                       64783 239 -    234502 I
e Manis_pentadactyla.KN017078.1                             36919 151 +     58827 I
e Manis_javanica.JSZB01003966.1                            146777 149 +    252755 I
e Lycaon_pictus.CM007556.1                               11088832 145 +  39895028 I
e Loxodonta_africana.GL010040.1                          20595521 159 -  62548349 I
e Lipotes_vexillifer.KE558548.1                            136684 137 +   3060487 I
e Leptonychotes_weddellii.KB714749.1                      3086694 144 -   3498232 I
e Lasiurus_borealis.LasBor_scaffold_59542                    4392 78 +     26176 I
e Kogia_breviceps.KogBre_flattened_line_35920               24334 131 +     37189 I
e Inia_geoffrensis.IniGeo_flattened_line_66725               9727 138 +     17520 I
e Hyaena_hyaena.HyaHya_flattened_line_20729                 18007 140 -     67322 I
e Hipposideros_galeritus.HipGal_scaffold_345408               110 148 -       919 I
e Hipposideros_armiger.JXIK01001085.1                      279109 148 -    477199 I
e Hippopotamus_amphibius.HipAmp_scaffold_1308              147822 141 +    277961 I
e Heterohyrax_brucei.HetBruBak_scaffold_25354               61360 1157 +     73687 I
e Hemitragus_hylocrius.HemHyl_scaffold_16669                28179 152 -     91191 I
e Helogale_parvula.HelPar_flattened_line_22962              17931 144 +     53719 I
e Giraffa_tippelskirchi.LVKQ01S012154.1                    181936 151 -    189561 I
e Felis_nigripes.FelNig_flattened_line_8080                 21907 144 +     52776 I
e Felis_catus_fca126.CM031420.1                         129280767 144 - 158578461 I
e Eubalaena_japonica.EubJap_flattened_line_7756             62191 134 +     89355 I
e Eschrichtius_robustus.EscRob_flattened_line_685          315738 131 +    330699 I
e Equus_przewalskii.ATBW01073585.1                          13681 352 +     92910 I
e Equus_caballus.CM000402.2                              13352192 351 +  41866177 I
e Equus_asinus.JREZ01000062.1                             5853687 356 -   7175178 I
e Enhydra_lutris.KZ291749.1                              85872908 144 +  99434291 I
e Elephantulus_edwardii.JH947210.1                        7829418 153 +  15467074 I
e Elaphurus_davidianus.JRFZ01086400.1                     1492159 152 +   1727528 I
e Eidolon_helvum.KE772537.1                                 12958 144 +     24177 I
e Echinops_telfairi.JH980316.1                           22999622 301 -  44670279 I
e Diceros_bicornis.DicBicMic_scaffold_9545                   3899 148 +    151128 I
e Dicerorhinus_sumatrensis.PEKH010003161.1                 323247 148 +    993696 I
e Desmodus_rotundus.KZ672188.1                           18699712 150 -  18957592 I
e Delphinapterus_leucas.KZ290064.1                       80037522 137 -  96802777 I
e Dasypus_novemcinctus.JH568778.1                          184336 138 -   6883506 I
e Cryptoprocta_ferox.CryFer_flattened_line_19014            52733 145 -     70449 I
e Crocidura_indochinensis.CroInd_scaffold_848148              245 143 +      1327 I
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1008 325 -      5782 I
e Condylura_cristata.JH655880.1                          60615058 5327 +  78930452 I
e Choloepus_hoffmanni.KN194586.1                           762487 156 +    964067 I
e Choloepus_didactylus.ChoDid_scaffold_36182                17182 156 -     21363 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_160623         4352 148 -      9338 I
e Catagonus_wagneri.CatWag_scaffold_1305                   159571 139 -    276539 I
e Carollia_perspicillata.CarPer_scaffold_4436               60428 148 +     67245 I
e Capra_hircus.CM004562.1                               135707122 152 - 157403528 I
e Capra_aegagrus.CM003214.1                              21325894 152 + 157394656 I
e Canis_lupus_orion.HG994411.1                           16456391 144 -  44759192 I
e Canis_lupus_familiaris.chr31                           11089376 145 +  39895921 I
e Canis_lupus_dingo.QKWQ01001993.1                       11266842 145 -  35597290 I
e Canis_lupus_VD.CanFam_VD_scaffold_16982                   15201 144 +     87036 I
e CanFam4.chr31                                          11520175 145 +  39901454 I
e Camelus_ferus.KB016973.1                                2973688 134 +   6889770 I
e Camelus_dromedarius.KN271192.1                           397952 134 -  15254737 I
e Camelus_bactrianus.KN276303.1                           3220251 134 -   8989139 I
e Bubalus_bubalis.KI419065.1                              1233473 152 -   1914593 I
e Bos_taurus.CM000177.6                                 136296393 150 - 158972876 I
e Bos_mutus.JH883513.1                                     573201 150 -    998990 I
e Bos_indicus.CM003021.1                                138140660 150 - 161108492 I
e Bison_bison.KN264915.1                                  6560545 150 +   6870073 I
e Beatragus_hunteri.BeaHun_scaffold_21644                   43929 148 -     72089 I
e Balaenoptera_bonaerensis.DF502048.1                        6070 131 -     13118 I
e Balaenoptera_acutorostrata.KI537095.1                  26380898 131 +  51448160 I
e Artibeus_jamaicensis.ArtJam_scaffold_41619                 9641 145 -     29036 I
e Antilocapra_americana.AntAmePen_scaffold_42841            31400 152 +     33004 I
e Anoura_caudifer.AnoCau_scaffold_422                      391221 148 -    631301 I
e Ammotragus_lervia.NIVO01013474.1                        3520819 152 +   4113121 I
e Ailurus_fulgens.LNAC01000003.1                          7095384 143 -  16596857 I
e Ailuropoda_melanoleuca.LNAT01000321.1                  10658031 144 +  23371972 I
e Acinonyx_jubatus.LLWD01000356.1                         2034711 144 +   3721120 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19677 266 -    119109 I
e Glis_glis.GliGli_scaffold_79770                           14463 152 -     18683 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     16536 153 -     20485 I
e Jaculus_jaculus.JH725517.1                              8566637 149 +  11848649 I
e Allactaga_bullata.AllBul_scaffold_70162                   17626 147 -     22067 I
e Galeopterus_variegatus.GalVar_scaffold_354               157007 139 +    324696 I
e Microtus_ochrogaster.CM001673.1                        22820377 122 -  98408828 I
e Xerus_inauris.XerIna_scaffold_7898                       127580 141 -    134049 I
e Varecia_variegata.k141_775891                             25501  3 -     33872 I
e Varecia_rubra.k141_432109                                  5966  3 -     20643 I
e Tupaia_tana.TupTan_flattened_line_68454                    6200 129 +     13056 I
e Tupaia_chinensis.KB320831.1                             2794010 238 -   3938065 I
e Tarsius_wallacei.k141_48636                               60532 3805 +     65473 I
e Tarsius_lariang.k141_609102                               27216 3812 +     42269 I
e Spermophilus_dauricus.KZ294190.1                        2240462 141 +   2842873 I
e Sigmodon_hispidus.SigHis_scaffold_11332                  100998 122 -    120886 I
e Rattus_norvegicus.chr11                                13915860 1475 +  90463843 I
e Psammomys_obesus.NESX01026517.1                           36232 122 +     77221 I
e Propithecus_verreauxi.k141_158021                         39953  3 -     48185 I
e Propithecus_tattersalli.k141_907138                       17689  3 -     53241 I
e Propithecus_perrieri.k141_7554                            18055  3 +     27322 I
e Propithecus_edwardsi.k141_1317105                         36132  3 -     44753 I
e Propithecus_diadema.k141_577245                           43745  3 +     52369 I
e Propithecus_coronatus.k141_1353159                         4402  3 +     11805 I
e Propithecus_coquerelli.NW_012147863.1                     19492  3 -     30946 I
e Prolemur_simus.MPIZ01000048.1                           6849325  3 +  12164890 I
e Peromyscus_maniculatus.KI615518.1                       4951147 122 -   8017169 I
e Perodicticus_potto.k141_713187                            25474  3 -     27972 I
e Perodicticus_ibeanus.k141_117958                           6160  3 -     23713 I
e Otolemur_garnettii.GL873528.1                          18009456  3 -  38779656 I
e Otolemur_crassicaudatus.k141_505435                        1475  3 -     53940 I
e Onychomys_torridus.OnyTor_scaffold_12578                  37821 122 +     62360 I
e Ondatra_zibethicus.OndZib_scaffold_6821                  125630 120 +    145789 I
e Octodon_degus.JH651621.1                                3686571 159 +  10294119 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65670190  0 +  89412551 C
e Nycticebus_coucang.k141_2051882                            4581  0 +      6470 C
e Nycticebus_bengalensis.LG16                            65567855  0 -  95554990 C
e Nannospalax_galili.KL201303.1                            119159  6 +    362372 I
e Myocastor_coypus.MyoCoy_scaffold_3653                     91077 157 -    117718 I
e Muscardinus_avellanarius.MusAve_scaffold_9643             12967 157 +     98495 I
e Mus_spretus.CM004110.1                                 74333152 260 +  97876770 I
e Mus_pahari.LT608305.1                                  67556620 256 +  89017189 I
e Mus_musculus.chr16                                     75490417 259 +  98207768 I
e Mus_caroli.LT608236.1                                  70767340 259 +  92629107 I
e Mirza_zaza.k141_226143                                     6369  3 +      8497 I
e Microcebus_murinus.CM007691.1                          16510980  3 +  47401472 I
e Mesocricetus_auratus.KB708139.1                         1047652 119 -  26018355 I
e Meriones_unguiculatus.MerUng_scaffold_52233               13942 122 +     15977 I
e Marmota_marmota.CZRN01000005.1                         36874362 245 +  64221397 I
e Loris_tardigradus.ctg97                                 3779150  0 +   6799190 C
e Loris_lydekkerianus.k141_550999                           11401  0 +     84689 C
e Lepilemur_septentrionalis.k141_578524                     32347  3 -     33031 I
e Lepilemur_ruficaudatus.k141_617879                        79356  3 +    116806 I
e Lepilemur_dorsalis.k141_134267                            54094  3 +     63517 I
e Lepilemur_ankaranensis.k141_884009                        24708  3 +     39228 I
e Lemur_catta.scaffold_1                                258407958  3 - 285822530 I
e Indri_indri.k141_5141390                                   1122  3 -      3181 I
e Ictidomys_tridecemlineatus.JH393315.1                   7126546 141 +  13083262 I
e Hystrix_cristata.HysCri_scaffold_50788                     6849 158 +     22540 I
e Heterocephalus_glaber.JH602058.1                        2551783 155 +  31725842 I
e Hapalemur_occidentalis.k141_797938                        46279  3 -     54384 I
e Hapalemur_meridionalis.k141_186231                        29651  3 -     42470 I
e Hapalemur_griseus.k141_1387522                             6402  3 +     56096 I
e Hapalemur_gilberti.k141_279011                             1076  3 -     11661 I
e Hapalemur_alaotrensis.k141_1280836                         2596  3 +     10286 I
e Graphiurus_murinus.GraMur_scaffold_4493                   77885 146 +    118900 I
e Galagoides_demidoff.k141_1769638                          11100  3 +     27357 I
e Galago_senegalensis.k141_964197                           14034  3 -     43889 I
e Galago_moholi.ctg555                                     211660  3 -    847004 I
e Fukomys_damarensis.KN123630.1                          13892149 71 -  19261668 I
e Eulemur_sanfordi.k141_186399                              16595  3 -     29447 I
e Eulemur_rufus.k141_1620292                                33869  3 +     46535 I
e Eulemur_rubriventer.k141_411740                           19131  3 +     26808 I
e Eulemur_mongoz.k141_825972                                16675  3 +     27497 I
e Eulemur_fulvus.k141_653297                                12015  3 +    109717 I
e Eulemur_flavifrons.k141_903901                             8537  3 +     60246 I
e Eulemur_coronatus.k141_3240342                            12216  3 +     36558 I
e Eulemur_collaris.k141_311830                               5742  3 -      6809 I
e Eulemur_albifrons.k141_715837                              5810  3 +     13586 I
e Ellobius_talpinus.LOJH01090055.1                           7187 122 -      7838 I
e Ellobius_lutescens.LOEQ01003611.1                        240062 122 -    369425 I
e Dolichotis_patagonum.DolPat_scaffold_14102                36772 276 -     73477 I
e Daubentonia_madagascariensis.ctg11                     16845635  3 +  31942871 I
e Dasyprocta_punctata.DasPun_flattened_line_634             59553 276 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                18462 277 +     26546 I
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 31752 154 -     67205 I
e Ctenodactylus_gundi.CteGun_scaffold_447                  209131 166 -    956709 I
e Cricetulus_griseus.LT883672.1                          53029979 121 +  72327488 I
e Cricetomys_gambianus.CriGam_scaffold_949                 279183 147 -    399297 I
e Colobus_angolensis.KN985967.1                          10887472 517 +  10971483 I
e Chinchilla_lanigera.JH721867.1                         15962421 137 +  43084221 I
e Cheirogaleus_medius.k141_133808                            8812  3 +     13308 I
e Cheirogaleus_major.k141_1157592                           59764  3 -     68416 I
e Cephalopachus_bancanus.k141_702587                         8788 3391 +     21754 I
e Cavia_tschudii.CavTsc_scaffold_488                       177453 271 +    436027 I
e Cavia_porcellus.DS562889.1                             15799262 290 -  24440124 I
e Cavia_aperea.AVPZ01000278.1                            15787326 288 -  24422027 I
e Castor_canadensis.CasCan_scaffold_47037                   31790 150 +     33760 I
e Carlito_syrichta.NW_007248099.1                          309764 3411 +    345090 I
e Avahi_peyrierasi.k141_798820                               1105  3 +      6337 I
e Avahi_laniger.k141_2840928                                 7489  3 -     16375 I
e Arctocebus_calabarensis.k141_587554                        1753  3 +      9265 I
e Acomys_cahirinus.AcoCah_scaffold_1625                    113481 121 -    189883 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               14815  8 +    209709 TA-A-ATA-------------T---------------------T
s Acinonyx_jubatus.LLWD01000356.1                         2034855  8 +   3721120 aa-a-ata-------------t---------------------t
i Acinonyx_jubatus.LLWD01000356.1                       I 144 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10658175  8 +  23371972 AC-A-GTA-------------T---------------------T
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 144 C 0
s Ailurus_fulgens.LNAC01000003.1                          7095527  8 -  16596857 GA-A-ATA-------------T---------------------T
i Ailurus_fulgens.LNAC01000003.1                        I 143 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   17773  8 -     22067 AA-A-ATA-------------T---------------------T
i Allactaga_bullata.AllBul_scaffold_70162               I 147 C 0
s Allenopithecus_nigroviridis.k141_2469532                   2541  8 -     60446 TC-T-ATA-------------T---------------------T
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         3258  8 -     29318 TC-T-ATA-------------T---------------------T
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         2194  8 +     38766 TC-T-ATA-------------T---------------------T
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          3152  8 -     80423 TC-T-ATA-------------T---------------------T
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            11125  8 -     18050 TA-T-ATA-------------T---------------------T
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_1710068                                841  8 +      1555 TA-T-ATA-------------T---------------------T
i Alouatta_caraya.k141_1710068                          C 0 C 0
s Alouatta_discolor.k141_811576                             11798  8 -     21359 TA-T-ATA-------------T---------------------T
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                1421  8 +      2129 TA-T-ATA-------------T---------------------T
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_2177643                           805  8 -      1868 TA-T-ATA-------------T---------------------T
i Alouatta_macconnelli.k141_2177643                     C 0 C 0
s Alouatta_nigerrima.k141_3537692                             854  8 +      1660 TA-T-ATA-------------T---------------------T
i Alouatta_nigerrima.k141_3537692                       C 0 C 0
s Alouatta_palliata.k141_2764429                              767  8 -      1480 TA-T-ATA-------------T---------------------T
i Alouatta_palliata.k141_2764429                        C 0 C 0
s Alouatta_puruensis.k141_131505                               61  8 +      4855 TA-T-ATA-------------T---------------------T
i Alouatta_puruensis.k141_131505                        C 0 C 0
s Alouatta_seniculus.k141_1531728                             982  8 -      1692 TA-T-ATA-------------T---------------------T
i Alouatta_seniculus.k141_1531728                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3520971  8 +   4113121 AA-A-TTA-------------T---------------------T
i Ammotragus_lervia.NIVO01013474.1                      I 152 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      391369  8 -    631301 GA-G-ATA-------------C---------------------T
i Anoura_caudifer.AnoCau_scaffold_422                   I 148 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            31552  8 +     33004 AA-A-TTA-------------T---------------------T
i Antilocapra_americana.AntAmePen_scaffold_42841        I 152 C 0
s Aotus_azarae.k141_3170768                                 63472  8 +     78111 TA-T-ATA-------------T---------------------T
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            6414  8 +     22701 TA-T-ATA-------------T---------------------T
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5750371  8 +   9889416 TA-T-ATA-------------T---------------------T
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             6960  8 -    104377 TA-T-ATA-------------T---------------------T
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               6962  8 +     23246 TA-T-ATA-------------T---------------------T
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     4511  7 +      5067 AA-A-CTA-------------G----------------------
i Aplodontia_rufa.AprRuf_scaffold_156013                I 140 C 0
s Arctocebus_calabarensis.k141_587554                        1756  8 +      9265 AA-T-ATA-------------T---------------------A
i Arctocebus_calabarensis.k141_587554                   I 3 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 9786  8 -     29036 GA-A-ATA-------------T---------------------T
i Artibeus_jamaicensis.ArtJam_scaffold_41619            I 145 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9540236  8 +  39197703 TT-T-ATA-------------T---------------------T
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             61507  8 +     85812 TT-T-ATA-------------T---------------------T
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                12520  8 +     89302 TT-T-ATA-------------T---------------------T
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             17023  8 -     58268 TT-T-ATA-------------T---------------------T
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             65015  8 +    119057 TT-T-ATA-------------T---------------------T
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               6986  8 -     25888 TT-T-ATA-------------T---------------------T
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 7492  8 -     16375 AA-T-ATA-------------T---------------------C
i Avahi_laniger.k141_2840928                            I 3 C 0
s Avahi_peyrierasi.k141_798820                               1108  8 +      6337 AA-T-ATA-------------T---------------------C
i Avahi_peyrierasi.k141_798820                          I 3 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26381029  8 +  51448160 AA-A-TTA-------------T---------------------T
i Balaenoptera_acutorostrata.KI537095.1                 I 131 C 0
s Balaenoptera_bonaerensis.DF502048.1                        6201  8 -     13118 AA-A-TTA-------------T---------------------T
i Balaenoptera_bonaerensis.DF502048.1                   I 131 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   44077  8 -     72089 AA-A-TTA-------------T---------------------T
i Beatragus_hunteri.BeaHun_scaffold_21644               I 148 C 0
s Bison_bison.KN264915.1                                  6560695  8 +   6870073 aa-a-tta-------------t---------------------t
i Bison_bison.KN264915.1                                I 150 C 0
s Bos_indicus.CM003021.1                                138140810  8 - 161108492 aa-a-tta-------------t---------------------t
i Bos_indicus.CM003021.1                                I 150 C 0
s Bos_mutus.JH883513.1                                     573351  8 -    998990 aa-a-tta-------------t---------------------t
i Bos_mutus.JH883513.1                                  I 150 C 0
s Bos_taurus.CM000177.6                                 136296543  8 - 158972876 aa-a-tta-------------t---------------------t
i Bos_taurus.CM000177.6                                 I 150 C 0
s Bubalus_bubalis.KI419065.1                              1233625  8 -   1914593 aa-a-tta-------------t---------------------t
i Bubalus_bubalis.KI419065.1                            I 152 C 0
s Cacajao_ayresi.k141_724503                               114873  8 -    171031 TA-T-ATA-------------T---------------------T
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 13902  8 +    125063 TA-T-ATA-------------T---------------------T
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                15945  8 -    216513 TA-T-ATA-------------T---------------------T
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        8488  8 -    134917 TA-T-ATA-------------T---------------------T
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3220385  8 -   8989139 aa-a-tta-------------t---------------------t
i Camelus_bactrianus.KN276303.1                         I 134 C 0
s Camelus_dromedarius.KN271192.1                           398086  8 -  15254737 aa-a-tta-------------t---------------------t
i Camelus_dromedarius.KN271192.1                        I 134 C 0
s Camelus_ferus.KB016973.1                                2973822  8 +   6889770 aa-a-tta-------------t---------------------t
i Camelus_ferus.KB016973.1                              I 134 C 0
s CanFam4.chr31                                          11520320  8 +  39901454 AA-A-ATA-------------T---------------------T
i CanFam4.chr31                                         I 145 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   15345  8 +     87036 AA-A-ATA-------------T---------------------T
i Canis_lupus_VD.CanFam_VD_scaffold_16982               I 144 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11266987  8 -  35597290 aa-a-ata-------------t---------------------t
i Canis_lupus_dingo.QKWQ01001993.1                      I 145 C 0
s Canis_lupus_familiaris.chr31                           11089521  8 +  39895921 aa-a-ata-------------t---------------------t
i Canis_lupus_familiaris.chr31                          I 145 C 0
s Canis_lupus_orion.HG994411.1                           16456535  8 -  44759192 aa-a-ata-------------t---------------------t
i Canis_lupus_orion.HG994411.1                          I 144 C 0
s Capra_aegagrus.CM003214.1                              21326046  8 + 157394656 AA-A-TTA-------------T---------------------T
i Capra_aegagrus.CM003214.1                             I 152 C 0
s Capra_hircus.CM004562.1                               135707274  8 - 157403528 AA-A-TTA-------------T---------------------T
i Capra_hircus.CM004562.1                               I 152 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               60576  8 +     67245 GA-A-ATA-------------T---------------------T
i Carollia_perspicillata.CarPer_scaffold_4436           I 148 C 0
s Castor_canadensis.CasCan_scaffold_47037                   31940  8 +     33760 TA-A-GTA-------------T---------------------T
i Castor_canadensis.CasCan_scaffold_47037               I 150 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   159710  8 -    276539 AA-A-TTA-------------T---------------------T
i Catagonus_wagneri.CatWag_scaffold_1305                I 139 C 0
s Cebus_albifrons.Contig22                               18891713  8 -  29618158 TA-T-GTA-------------T---------------------T
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 9257  8 -     26817 TA-T-GTA-------------T---------------------T
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                13500  8 +     25043 TA-T-GTA-------------T---------------------T
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4364743  8 +   7569818 aa-a-ata-------------t---------------------t
i Ceratotherium_simum.JH767818.1                        I 148 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         4500  8 -      9338 AA-A-ATA-------------T---------------------T
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    I 148 C 0
s Cercocebus_atys.KQ010443.1                              6556488  8 +   6739814 TC-T-ATA-------------T---------------------T
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      27962  8 +     60454 TC-T-ATA-------------T---------------------T
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          3169  8 -     21101 TC-T-ATA-------------T---------------------T
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         60479  8 -    107033 TC-T-ATA-------------T---------------------T
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        3358  8 -     17608 TC-T-ATA-------------T---------------------T
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                           517  8 +     45019 TC-T-ATA-------------T---------------------T
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                            601  8 +     15177 TC-T-ATA-------------T---------------------T
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          3401  8 +     16677 TC-T-ATA-------------T---------------------T
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           25570  8 +     35983 TC-T-ATA-------------T---------------------T
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11992099  8 +  12117833 TC-T-ATA-------------T---------------------T
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46478856  8 +  46592721 TC-T-ATA-------------T---------------------T
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      42411  8 -     45581 TC-T-ATA-------------T---------------------T
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       3413  8 +     35577 TC-T-ATA-------------T---------------------T
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        3186  8 -     25661 TC-T-ATA-------------T---------------------T
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        3166  8 -     17744 TC-T-ATA-------------T---------------------T
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        22771  8 +     37128 TC-T-ATA-------------T---------------------T
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           3628  8 -      6963 AA-A-GTA-------------T---------------------T
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      I 145 C 0
s Cheirogaleus_major.k141_1157592                           59767  8 -     68416 AA-T-ATA-------------T---------------------C
i Cheirogaleus_major.k141_1157592                       I 3 C 0
s Cheirogaleus_medius.k141_133808                            8815  8 +     13308 AA-T-ATA-------------T---------------------C
i Cheirogaleus_medius.k141_133808                       I 3 C 0
s Cheracebus_lucifer.k141_619653                             6530  8 -     18223 TA-T-ATA-------------T---------------------T
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             23548  8 +     25473 TA-T-ATA-------------T---------------------T
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           42588  8 +     57117 TA-T-ATA-------------T---------------------T
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          47267  8 +     54541 TA-T-ATA-------------T---------------------T
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15962558  8 +  43084221 a--aaata-------------t---------------------t
i Chinchilla_lanigera.JH721867.1                        I 137 C 0
s Chiropotes_israelita.k141_1189915                         72074  8 +    196370 TA-T-ATA-------------T---------------------T
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          16254  8 +     40510 TA-T-ATA-------------T---------------------T
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15140768  8 -  15256731 TC-T-ATA-------------T---------------------T
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      35377  8 -     53260 TC-T-ATA-------------T---------------------T
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101145936  8 + 101219884 TC-T-ATA-------------T---------------------T
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                17338  8 -     21363 AG-A-GTA-------------T---------------------T
i Choloepus_didactylus.ChoDid_scaffold_36182            I 156 C 0
s Choloepus_hoffmanni.KN194586.1                           762643  8 +    964067 AG-A-GTA-------------T---------------------T
i Choloepus_hoffmanni.KN194586.1                        I 156 C 0
s Colobus_guereza.LG08                                  147665856  8 + 156195979 TC-T-ATA-------------T---------------------T
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            17839  8 +     23629 TC-T-ATA-------------T---------------------T
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60620385 24 +  78930452 -------g-------------ttataaaccagtgttacctcact
i Condylura_cristata.JH655880.1                         I 5327 C 0
s Crocidura_indochinensis.CroInd_scaffold_848148              388  8 +      1327 AT-A-ATA-------------T---------------------T
i Crocidura_indochinensis.CroInd_scaffold_848148        I 143 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            52878  8 -     70449 AC-A-ATA-------------T---------------------T
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 145 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  209297  8 -    956709 AA-A-ATA-------------T---------------------G
i Ctenodactylus_gundi.CteGun_scaffold_447               I 166 I 2
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 31906  9 -     67205 AAAA-ATA-------------T---------------------T
i Ctenomys_sociabilis.CteSoc_scaffold_19489             I 154 C 0
s Dasypus_novemcinctus.JH568778.1                          184474  8 -   6883506 AA-A-GTA-------------T---------------------T
i Dasypus_novemcinctus.JH568778.1                       I 138 C 0
s Daubentonia_madagascariensis.ctg11                     16845638  8 +  31942871 AA-T-ATA-------------T---------------------C
i Daubentonia_madagascariensis.ctg11                    I 3 C 0
s Delphinapterus_leucas.KZ290064.1                       80037659  8 -  96802777 AA-A-TTA-------------T---------------------T
i Delphinapterus_leucas.KZ290064.1                      I 137 C 0
s Desmodus_rotundus.KZ672188.1                           18699862  8 -  18957592 ga-a-ata-------------t---------------------t
i Desmodus_rotundus.KZ672188.1                          I 150 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 323395  8 +    993696 aa-a-ata-------------t---------------------t
i Dicerorhinus_sumatrensis.PEKH010003161.1              I 148 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   4047  8 +    151128 AA-A-ATA-------------T---------------------T
i Diceros_bicornis.DicBicMic_scaffold_9545              I 148 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   157759  6 +    228994 A--A--CA-------------T---------------------T
i Dinomys_branickii.DinBra_scaffold_1996                I 69 C 0
s Dipodomys_ordii.KN672545.1                              3657211  8 +   4240102 AA-A-ACA-------------T---------------------T
i Dipodomys_ordii.KN672545.1                            I 144 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 28854  8 +     28912 AA-A-ACA-------------T---------------------T
i Dipodomys_stephensi.DipSte_scaffold_44365             I 144 C 0
s Eidolon_helvum.KE772537.1                                 13102  8 +     24177 GA-T-ATA-------------T---------------------T
i Eidolon_helvum.KE772537.1                             I 144 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1492311  8 +   1727528 AA-A-TTA-------------T---------------------T
i Elaphurus_davidianus.JRFZ01086400.1                   I 152 C 0
s Elephantulus_edwardii.JH947210.1                        7829571  8 +  15467074 AA-T-ATA-------------T---------------------T
i Elephantulus_edwardii.JH947210.1                      I 153 C 0
s Enhydra_lutris.KZ291749.1                              85873052  8 +  99434291 aa-a-ata-------------t---------------------t
i Enhydra_lutris.KZ291749.1                             I 144 I 11
s Eptesicus_fuscus.JH977687.1                             4707799  8 +   6522550 GA-A-ACA-------------T---------------------T
i Eptesicus_fuscus.JH977687.1                           I 150 C 0
s Equus_asinus.JREZ01000062.1                             5854043  8 -   7175178 aa-a-ata-------------t---------------------t
i Equus_asinus.JREZ01000062.1                           I 356 C 0
s Equus_caballus.CM000402.2                              13352543  8 +  41866177 aa-a-ata-------------t---------------------t
i Equus_caballus.CM000402.2                             I 351 C 0
s Equus_przewalskii.ATBW01073585.1                          14033  8 +     92910 aa-a-ata-------------t---------------------t
i Equus_przewalskii.ATBW01073585.1                      I 352 C 0
s Erythrocebus_patas.Contig8                             48777947  8 -  48907691 TC-T-ATA-------------T---------------------T
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          315869  8 +    330699 AA-A-TTA-------------T---------------------T
i Eschrichtius_robustus.EscRob_flattened_line_685       I 131 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             62325  8 +     89355 AA-A-TTA-------------T---------------------T
i Eubalaena_japonica.EubJap_flattened_line_7756         I 134 C 0
s Eulemur_albifrons.k141_715837                              5813  8 +     13586 AA-T-ATA-------------T---------------------T
i Eulemur_albifrons.k141_715837                         I 3 C 0
s Eulemur_collaris.k141_311830                               5745  8 -      6809 AA-T-ATA-------------T---------------------T
i Eulemur_collaris.k141_311830                          I 3 C 0
s Eulemur_coronatus.k141_3240342                            12219  8 +     36558 AA-T-ATA-------------T---------------------T
i Eulemur_coronatus.k141_3240342                        I 3 C 0
s Eulemur_flavifrons.k141_903901                             8540  8 +     60246 AA-T-ATA-------------T---------------------T
i Eulemur_flavifrons.k141_903901                        I 3 C 0
s Eulemur_fulvus.k141_653297                                12018  8 +    109717 AA-T-ATA-------------T---------------------T
i Eulemur_fulvus.k141_653297                            I 3 C 0
s Eulemur_macaco.k141_747087                                    3  8 -     19505 AA-T-ATA-------------T---------------------T
i Eulemur_macaco.k141_747087                            N 0 C 0
s Eulemur_mongoz.k141_825972                                16678  8 +     27497 AA-T-ATA-------------T---------------------T
i Eulemur_mongoz.k141_825972                            I 3 C 0
s Eulemur_rubriventer.k141_411740                           19134  8 +     26808 AA-T-ATA-------------T---------------------T
i Eulemur_rubriventer.k141_411740                       I 3 C 0
s Eulemur_rufus.k141_1620292                                33872  8 +     46535 AA-T-ATA-------------T---------------------T
i Eulemur_rufus.k141_1620292                            I 3 C 0
s Eulemur_sanfordi.k141_186399                              16598  8 -     29447 AA-T-ATA-------------T---------------------T
i Eulemur_sanfordi.k141_186399                          I 3 C 0
s Felis_catus.CM001386.2                                129893827  8 - 159252932 aa-a-ata-------------t---------------------t
i Felis_catus.CM001386.2                                I 144 C 0
s Felis_catus_fca126.CM031420.1                         129280911  8 - 158578461 aa-a-ata-------------t---------------------t
i Felis_catus_fca126.CM031420.1                         I 144 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 22051  8 +     52776 AA-A-ATA-------------T---------------------T
i Felis_nigripes.FelNig_flattened_line_8080             I 144 C 0
s Fukomys_damarensis.KN123630.1                          13892220  8 -  19261668 AT-A-ATA-------------T---------------------T
i Fukomys_damarensis.KN123630.1                         I 71 C 0
s Galago_moholi.ctg555                                     211663  8 -    847004 AA-T-ATA-------------C---------------------A
i Galago_moholi.ctg555                                  I 3 C 0
s Galago_senegalensis.k141_964197                           14037  8 -     43889 AA-T-ATA-------------C---------------------A
i Galago_senegalensis.k141_964197                       I 3 C 0
s Galagoides_demidoff.k141_1769638                          11103  8 +     27357 AA-G-ATA-------------T---------------------A
i Galagoides_demidoff.k141_1769638                      I 3 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               157146  8 +    324696 AA-A-ACA-------------T---------------------T
i Galeopterus_variegatus.GalVar_scaffold_354            I 139 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    182087  8 -    189561 aa-a-tta-------------t---------------------C
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 151 C 0
s Glis_glis.GliGli_scaffold_79770                           14615  6 -     18683 AA-A-ATA------------------------------------
i Glis_glis.GliGli_scaffold_79770                       I 152 C 0
s Gorilla_beringei.k141_111300                               6525  8 -     14630 TA-T-GTA-------------T---------------------T
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119653625  8 - 195582420 TA-T-GTA-------------T---------------------T
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   78031  8 +    118900 AA-A-ATA-------------C---------------------T
i Graphiurus_murinus.GraMur_scaffold_4493               I 146 C 0
s Hapalemur_alaotrensis.k141_1280836                         2599  8 +     10286 AA-T-ATA-------------T---------------------T
i Hapalemur_alaotrensis.k141_1280836                    I 3 C 0
s Hapalemur_gilberti.k141_279011                             1079  8 -     11661 AA-T-ATA-------------T---------------------T
i Hapalemur_gilberti.k141_279011                        I 3 C 0
s Hapalemur_griseus.k141_1387522                             6405  8 +     56096 AA-T-ATA-------------T---------------------T
i Hapalemur_griseus.k141_1387522                        I 3 C 0
s Hapalemur_meridionalis.k141_186231                        29654  8 -     42470 AA-T-ATA-------------T---------------------T
i Hapalemur_meridionalis.k141_186231                    I 3 C 0
s Hapalemur_occidentalis.k141_797938                        46282  8 -     54384 AA-T-ATA-------------T---------------------T
i Hapalemur_occidentalis.k141_797938                    I 3 C 0
s Helogale_parvula.HelPar_flattened_line_22962              18075  8 +     53719 AA-A-ATA-------------C---------------------T
i Helogale_parvula.HelPar_flattened_line_22962          I 144 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                28331  8 -     91191 AT-A-TTA-------------T---------------------T
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 152 C 0
s Heterocephalus_glaber.JH602058.1                        2551938  8 +  31725842 aa-a-acA-------------T---------------------T
i Heterocephalus_glaber.JH602058.1                      I 155 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              147963  8 +    277961 AA-A-TTA-------------T---------------------T
i Hippopotamus_amphibius.HipAmp_scaffold_1308           I 141 C 0
s Hipposideros_armiger.JXIK01001085.1                      279257  8 -    477199 aa-a-ata-------------t---------------------t
i Hipposideros_armiger.JXIK01001085.1                   I 148 C 0
s Hipposideros_galeritus.HipGal_scaffold_345408               258  8 -       919 AA-A-ATA-------------T---------------------T
i Hipposideros_galeritus.HipGal_scaffold_345408         I 148 C 0
s Hoolock_leuconedys.ctg649                                   104993 19 +    115816 ---t-acttATAGGTTATATAT---------------------T
i Hoolock_leuconedys.ctg649                                I 817 I 188
s Hyaena_hyaena.HyaHya_flattened_line_20729                 18147  8 -     67322 AA-A-ATA-------------T---------------------T
i Hyaena_hyaena.HyaHya_flattened_line_20729             I 140 C 0
s Hylobates_abbotti.k141_164775                               993  8 -      2073 TA-T-ATA-------------T---------------------T
i Hylobates_abbotti.k141_164775                         C 0 C 0
s Hylobates_agilis.k141_1362131                                 4  8 +      1075 CA-T-ATA-------------T---------------------T
i Hylobates_agilis.k141_1362131                         n 358 C 0
s Hylobates_klossii.k141_183401                               548  8 -      1272 CA-T-ATA-------------T---------------------T
i Hylobates_klossii.k141_183401                         C 0 I 37
s Hylobates_pileatus_b.ContigUN                                 14625901  8 -  25970782 TA-T-ATA-------------T---------------------T
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_950183                              596  8 +      2027 TA-T-ATA-------------T---------------------T
i Hylobates_muelleri.k141_950183                        C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             35061  8 -     60944 TA-T-ATA-------------T---------------------T
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     7007  7 +     22540 A--A-GTA-------------T---------------------T
i Hystrix_cristata.HysCri_scaffold_50788                I 158 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7126687  8 +  13083262 AA-A-TTA-------------T---------------------T
i Ictidomys_tridecemlineatus.JH393315.1                 I 141 C 0
s Indri_indri.k141_5141390                                   1125  8 -      3181 AA-T-ATG-------------T---------------------C
i Indri_indri.k141_5141390                              I 3 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               9865  8 +     17520 AA-A-TTA-------------T---------------------T
i Inia_geoffrensis.IniGeo_flattened_line_66725          I 138 C 0
s Jaculus_jaculus.JH725517.1                              8566786  8 +  11848649 AA-A-GTA-------------T---------------------T
i Jaculus_jaculus.JH725517.1                            I 149 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               24465  8 +     37189 AA-A-TTA-------------T---------------------T
i Kogia_breviceps.KogBre_flattened_line_35920           I 131 C 0
s Lagothrix_lagothricha.k141_12968                          51105  8 -    147782 TT-T-ATA-------------T---------------------T
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    4470  8 +     26176 GA-A-ATG-------------T---------------------T
i Lasiurus_borealis.LasBor_scaffold_59542               I 78 C 0
s Lemur_catta.scaffold_1                                258407961  8 - 285822530 AA-T-ATA-------------T---------------------T
i Lemur_catta.scaffold_1                                I 3 C 0
s Lepilemur_ankaranensis.k141_884009                        24711  8 +     39228 AA-T-ATA-------------T---------------------C
i Lepilemur_ankaranensis.k141_884009                    I 3 C 0
s Lepilemur_dorsalis.k141_134267                            54097  8 +     63517 AA-T-ATA-------------T---------------------C
i Lepilemur_dorsalis.k141_134267                        I 3 C 0
s Lepilemur_ruficaudatus.k141_617879                        79359  8 +    116806 AA-T-ATA-------------T---------------------C
i Lepilemur_ruficaudatus.k141_617879                    I 3 C 0
s Lepilemur_septentrionalis.k141_578524                     32350  8 -     33031 AA-T-ATA-------------T---------------------C
i Lepilemur_septentrionalis.k141_578524                 I 3 C 0
s Leptonychotes_weddellii.KB714749.1                      3086838  8 -   3498232 aa-a-ata-------------t---------------------t
i Leptonychotes_weddellii.KB714749.1                    I 144 C 0
s Lepus_americanus.LepAme_scaffold_62849                    14164  8 +     22452 CA-A-ATG-------------T---------------------T
i Lepus_americanus.LepAme_scaffold_62849                I 183 C 0
s Lipotes_vexillifer.KE558548.1                            136821  8 +   3060487 AA-A-TTA-------------T---------------------T
i Lipotes_vexillifer.KE558548.1                         I 137 C 0
s Lophocebus_aterrimus.ctg55                             19249565  8 +  19376315 TC-T-ATA-------------T---------------------T
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           11401  4 +     84689 ------TA-------------T---------------------G
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3779150  4 +   6799190 ------TA-------------T---------------------G
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20595680  8 -  62548349 AA-A-AAA-------------T---------------------T
i Loxodonta_africana.GL010040.1                         I 159 C 0
s Lycaon_pictus.CM007556.1                               11088977  8 +  39895028 NN-N-NNA-------------T---------------------T
i Lycaon_pictus.CM007556.1                              I 145 C 0
s Macaca_arctoides.k141_2201161                             21322  8 +     74745 TC-T-ATA-------------T---------------------T
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12707782  8 +  12821369 TC-T-ATA-------------T---------------------T
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                 360  8 -     26467 TC-T-ATA-------------T---------------------T
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           48229  8 +     63263 TC-T-ATA-------------T---------------------T
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                  337  8 -     26361 TC-T-ATA-------------T---------------------T
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 3514  8 -      7381 TC-T-ATA-------------T---------------------T
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  46752  8 -     79256 TC-T-ATA-------------T---------------------T
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196036854  8 + 196197964 TC-T-ATA-------------T---------------------T
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11447020  8 +  11645122 TC-T-ATA-------------T---------------------T
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   5706  8 -     46448 TC-T-ATA-------------T---------------------T
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                3372  8 -     13212 TC-T-ATA-------------T---------------------T
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 17049  8 -     55006 TC-T-ATA-------------T---------------------T
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43842155  8 +  43892939 TC-T-GTA-------------T---------------------T
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               18336  8 -     24607 TC-T-ATA-------------T---------------------T
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               5703  8 -     27140 TC-T-ATA-------------T---------------------T
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                701822  8 +    802869 GA-T-ATA-------------T---------------------T
i Macroglossus_sobrinus.MacSob_scaffold_879             I 90 C 0
s Mandrillus_leucophaeus.scaffold125                     43438737  8 -  43563597 TC-C-ATA-------------T---------------------T
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4451551  8 -   4543643 TC-C-ATA-------------T---------------------T
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            146926  8 +    252755 GA-A-ATA-------------T---------------------T
i Manis_javanica.JSZB01003966.1                         I 149 C 0
s Manis_pentadactyla.KN017078.1                             37070  8 +     58827 GA-A-ATA-------------T---------------------T
i Manis_pentadactyla.KN017078.1                         I 151 C 0
s Marmota_marmota.CZRN01000005.1                         36874607  8 +  64221397 ac-a-tta-------------t---------------------t
i Marmota_marmota.CZRN01000005.1                        I 245 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             1861  8 -     87323 GA-A-ATA-------------T---------------------T
i Mellivora_capensis.MelCap_flattened_line_15433        I 141 C 0
s Mesoplodon_bidens.MesBid_scaffold_227248                   1144  8 -      1377 AA-A-TTA-------------T---------------------T
i Mesoplodon_bidens.MesBid_scaffold_227248              I 133 C 0
s Microcebus_murinus.CM007691.1                          16510983  8 +  47401472 AA-T-ATA-------------T---------------------C
i Microcebus_murinus.CM007691.1                         I 3 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  39095  8 -     48017 AT-a-aaa-------------a---------------------t
i Microgale_talazaci.MicTal_scaffold_34660              I 3525 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               23766  8 -     32043 GA-A-ACA-------------T---------------------T
i Micronycteris_hirsuta.MicHir_scaffold_37978           I 149 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8211829  8 +  10048721 aa-a-ata-------------t---------------------T
i Miniopterus_natalensis.LDJU01000022.1                 I 1042 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            36318  8 +     45743 AA-A-ATA-------------T---------------------T
i Miniopterus_schreibersii.MinSch_scaffold_24116        I 1042 C 0
s Miopithecus_ogouensis.k141_2935907                         3298  8 +     29742 TC-T-ATA-------------T---------------------T
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        12354  8 -    104932 AA-A-ATA-------------T---------------------T
i Mirounga_angustirostris.MirAng_flattened_line_8852    I 144 C 0
s Mirza_zaza.k141_226143                                     6372  8 +      8497 AA-T-ATA-------------T---------------------C
i Mirza_zaza.k141_226143                                I 3 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 147249  8 +    154973 AA-A-TTA-------------T---------------------T
i Monodon_monoceros.MonMon_M_scaffold_5598              I 137 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                162288  8 +    265003 GA-A-ATA-------------T---------------------T
i Mormoops_blainvillei.MorMeg_scaffold_2952             I 149 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  2342  8 -     19904 AA-A-TTA-------------T---------------------T
i Moschus_moschiferus.MosMos_scaffold_78805             I 148 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  145772  8 -    168139 AA-A-ATA-------------T---------------------T
i Mungos_mungo.MunMun_flattened_line_8729               I 146 C 0
s Murina_feae.MurFea_scaffold_2254                          23284  8 -    100666 GA-A-ATA-------------T---------------------T
i Murina_feae.MurFea_scaffold_2254                      I 1145 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             13124  8 +     98495 AA-C-ATA-------------T---------------------T
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 157 C 0
s Mustela_putorius.JH417978.1                             4425232  8 -  28371801 aa-a-ata-------------t---------------------t
i Mustela_putorius.JH417978.1                           I 144 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     91234  9 -    117718 AAAA-ATG-------------T---------------------T
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 157 C 0
s Myotis_brandtii.KE161952.1                               969904  8 +   8389877 ga-a-ata-------------t---------------------t
i Myotis_brandtii.KE161952.1                            I 148 C 0
s Myotis_davidii.KB114863.1                               5021330  8 +   6462685 ga-a-ata-------------t---------------------t
i Myotis_davidii.KB114863.1                             I 150 C 0
s Myotis_lucifugus.GL429887.1                             3467406  8 -   3747815 ga-a-ata-------------t---------------------t
i Myotis_lucifugus.GL429887.1                           I 148 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        12651  8 +     66751 GA-A-ATA-------------T---------------------T
i Myotis_myotis.MyoMyo_scaffold_6123                    I 150 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             5899  8 -      8794 AA-A-GTG-------------T---------------------T
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        I 156 C 0
s Nasalis_larvatus.k141_153429                               9776  8 +     48152 TC-T-ATA-------------T---------------------T
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4485744  8 -  14209539 aa-a-ata-------------t---------------------t
i Neomonachus_schauinslandi.NINY01007774.1              I 144 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3951861  8 -   4490290 AA-A-TTA-------------T---------------------T
i Neophocaena_asiaeorientalis.KZ688543.1                I 137 C 0
s Nomascus_annamensis.k141_220265                            1673  8 +      1763 TA-T-ATA-------------T---------------------T
i Nomascus_annamensis.k141_220265                       C 0 C 0
s Nomascus_concolor.k141_226614                              2463  8 -      5092 TA-T-ATA-------------T---------------------T
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_1032971                             37  8 -      1918 TA-T-ATA-------------T---------------------T
i Nomascus_gabriellae.k141_1032971                      n 72 C 0
s Nomascus_siki_b.tarseq_80                             25668  8 -  18771707 tt-t-gtt-------------t---------------------t
i Nomascus_siki_b.tarseq_80                         C 0 I 547
s Nomascus_siki_a.k141_595747                                  3885  8 +      4512 TA-T-ATA-------------T---------------------T
i Nomascus_siki_a.k141_595747                             C 0 I 37
s Nyctereutes_procyonoides.CAJHUB010000786.1                31777  8 +   3668941 aa-a-ata-------------t---------------------t
i Nyctereutes_procyonoides.CAJHUB010000786.1            I 144 C 0
s Nycticebus_bengalensis.LG16                            65567855  4 -  95554990 ------TA-------------T---------------------A
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            4581  4 +      6470 ------TA-------------T---------------------A
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65670190  4 +  89412551 ------TA-------------T---------------------A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Octodon_degus.JH651621.1                                3686730  9 +  10294119 AAAA-ATA-------------T---------------------T
i Octodon_degus.JH651621.1                              I 159 C 0
s Odobenus_rosmarus.KB229369.1                             680411  8 -   3126709 ga-a-ata-------------t---------------------t
i Odobenus_rosmarus.KB229369.1                          I 144 C 0
s Odocoileus_virginianus.KZ101650.1                       1080529  8 +   1425656 aa-a-tta-------------t---------------------t
i Odocoileus_virginianus.KZ101650.1                     I 155 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         37817  8 +     78940 aa-a-tta-------------t---------------------t
i Okapia_johnstoni.LVCL01S0017931.1                     I 153 C 0
s Orcinus_orca.KB316965.1                                 7225546  8 -   7562323 AA-A-TTA-------------T---------------------T
i Orcinus_orca.KB316965.1                               I 137 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              60806  8 -     66828 AA-A-ATA-------------T---------------------T
i Orycteropus_afer.OryAfe_flattened_line_13509          I 153 C 0
s Oryctolagus_cuniculus.CM000803.1                      141877201  8 + 163896628 CA-A-ATG-------------T---------------------T
i Oryctolagus_cuniculus.CM000803.1                      I 183 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      309061  8 -    505867 aa-a-ata-------------t---------------------t
i Otocyon_megalotis.JAEUCK010005121.1                   I 144 C 0
s Otolemur_crassicaudatus.k141_505435                        1478  8 -     53940 AA-T-ATA-------------T---------------------A
i Otolemur_crassicaudatus.k141_505435                   I 3 C 0
s Otolemur_garnettii.GL873528.1                          18009459  8 -  38779656 AA-T-ATA-------------T---------------------A
i Otolemur_garnettii.GL873528.1                         I 3 C 0
s Ovis_aries.CM001582.2                                 134078122  8 - 275406953 AT-A-TTA-------------T---------------------T
i Ovis_aries.CM001582.2                                 I 152 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      79337  8 +    140051 AT-A-TTA-------------T---------------------T
i Ovis_canadensis.OviCan_scaffold_6251                  I 152 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  35194  8 +    295523 AA-A-ATA-------------T---------------------T
i Panthera_onca.PanOnc_flattened_line_1615              I 144 C 0
s Panthera_pardus.KV860323.1                              3638944  8 +  18214204 aa-a-ata-------------a---------------------t
i Panthera_pardus.KV860323.1                            I 144 C 0
s Panthera_tigris.KE721879.1                              5028620  8 -   6340057 aa-a-ata-------------t---------------------t
i Panthera_tigris.KE721879.1                            I 144 C 0
s Pantholops_hodgsonii.KE114631.1                         1066972  8 -   1292953 AA-A-TTA-------------T---------------------T
i Pantholops_hodgsonii.KE114631.1                       I 152 C 0
s Papio_anubis.CM001492.2                               188157531  8 - 188283584 TC-T-ATA-------------T---------------------T
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                               623  8 +     25005 TC-T-ATA-------------T---------------------T
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47514908  8 +  47705337 TC-T-ATA-------------T---------------------T
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 68898  8 -    104429 TC-T-ATA-------------T---------------------T
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    7427  8 +     14967 TC-T-ATA-------------T---------------------T
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 3292  8 -      7628 TC-T-ATA-------------T---------------------T
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    116654  8 -    135482 AA-A-ATA-------------T---------------------T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 I 146 C 0
s Perodicticus_ibeanus.k141_117958                           6163  8 -     23713 AA-T-ATA-------------T---------------------A
i Perodicticus_ibeanus.k141_117958                      I 3 C 0
s Perodicticus_potto.k141_713187                            25477  8 -     27972 AA-T-ATA-------------T---------------------A
i Perodicticus_potto.k141_713187                        I 3 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359        891  1 +     49596 A-------------------------------------------
i Perognathus_longimembris.PerPac_flattened_line_19359  I 143 I 695
s Petromus_typicus.PetTyp_scaffold_33007                    14463  8 -     36578 AA-A-ATA-------------T---------------------C
i Petromus_typicus.PetTyp_scaffold_33007                I 145 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            122150  8 -    122454 AA-A-TTA-------------T---------------------T
i Phocoena_phocoena.PhoPho_flattened_line_11948         I 137 C 0
s Piliocolobus_badius.k141_1987485                           3305  8 -      5908 TC-T-ATA-------------T---------------------T
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       3923  8 -     17985 TC-T-ATA-------------T---------------------T
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            3290  8 +      7694 TC-T-ATA-------------T---------------------T
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26741774  8 +  26888534 TC-T-ATA-------------T---------------------T
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pithecia_albicans.k141_991845                             44711  8 -     61926 TA-T-ATA-------------T---------------------T
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        26096  8 +     78826 TA-T-ATA-------------T---------------------T
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                             10142  8 -     15800 TA-T-ATA-------------T---------------------T
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        13341  8 -     16101 TA-T-ATA-------------T---------------------T
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          6570  8 +      9673 TA-T-ATA-------------T---------------------T
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13475570  8 -  19735023 TA-T-ATA-------------T---------------------T
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           14473  8 -     31692 TA-T-ATA-------------T---------------------T
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           6465  8 +     21690 AA-A-TTA-------------T---------------------T
i Platanista_gangetica.PlaMin_flattened_line_72990      I 365 C 0
s Plecturocebus_bernhardi.k141_959214                       23809  8 +     44506 TA-T-ATA-------------T---------------------T
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        24021  8 +     67491 TA-T-ATA-------------T---------------------T
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      14261  8 -     98129 TA-T-ATA-------------T---------------------T
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     23861  8 +    147771 TA-T-ATA-------------T---------------------T
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                          497  8 -     43940 TA-T-ATA-------------T---------------------T
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          4580  8 -     55515 TA-T-ATA-------------T---------------------T
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         23934  8 +    152463 TA-T-ATA-------------T---------------------T
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       1651  8 -    119457 TA-T-ATA-------------T---------------------T
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         13657  8 +    134592 TA-T-ATA-------------T---------------------T
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          24244  8 -     75465 TA-T-ATA-------------T---------------------T
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              188409  8 -    373494 TA-T-ATA-------------T---------------------T
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19809056  8 +  19899266 TA-T-ATA-------------T---------------------T
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               7055  8 -     15069 TC-T-ATG-------------T---------------------T
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              7170  8 +     14865 TC-T-ATG-------------T---------------------T
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6849328  8 +  12164890 AA-T-ATA-------------T---------------------T
i Prolemur_simus.MPIZ01000048.1                         I 3 C 0
s Propithecus_coquerelli.NW_012147863.1                     19495  8 -     30946 nn-n-nnn-------------n---------------------n
i Propithecus_coquerelli.NW_012147863.1                 I 3 C 0
s Propithecus_coronatus.k141_1353159                         4405  5 +     11805 AA-C-AC-------------------------------------
i Propithecus_coronatus.k141_1353159                    I 3 C 0
s Propithecus_diadema.k141_577245                           43748  8 +     52369 AA-T-ATA-------------T---------------------C
i Propithecus_diadema.k141_577245                       I 3 C 0
s Propithecus_edwardsi.k141_1317105                         36135  8 -     44753 AA-T-ACA-------------T---------------------C
i Propithecus_edwardsi.k141_1317105                     I 3 C 0
s Propithecus_perrieri.k141_7554                            18058  8 +     27322 AA-T-ATA-------------T---------------------C
i Propithecus_perrieri.k141_7554                        I 3 C 0
s Propithecus_tattersalli.k141_907138                       17692  8 -     53241 AA-T-ATA-------------T---------------------C
i Propithecus_tattersalli.k141_907138                   I 3 C 0
s Propithecus_verreauxi.k141_158021                         39956  8 -     48185 AA-T-ATA-------------T---------------------C
i Propithecus_verreauxi.k141_158021                     I 3 C 0
s Pteronotus_parnellii.KE867983.1                            4935  8 -     27784 GA-A-ATA-------------T---------------------T
i Pteronotus_parnellii.KE867983.1                       I 136 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        247543  8 -    344369 AA-A-ATA-------------T---------------------T
i Pteronura_brasiliensis.PteBra_flattened_line_1343     I 144 C 0
s Pteropus_alecto.KB031157.1                             13246822  8 -  17261082 ga-t-ata-------------t---------------------t
i Pteropus_alecto.KB031157.1                            I 132 C 0
s Pteropus_vampyrus.KN525959.1                             604773  8 -   3946241 ga-t-ata-------------t---------------------t
i Pteropus_vampyrus.KN525959.1                          I 132 C 0
s Puma_concolor.QAVW01000427.1                          131535215  8 - 161321710 aa-a-ata-------------t---------------------t
i Puma_concolor.QAVW01000427.1                          I 144 C 0
s Pygathrix_cinerea.k141_374971                             31158  8 +     56732 TC-T-ATA-------------T---------------------T
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6807652  8 +   6970761 TC-T-ATA-------------T---------------------T
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             7045  8 +     18040 TC-T-ATA-------------T---------------------T
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                16641  8 +     68503 AA-A-TTA-------------T---------------------T
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 153 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1788711  8 +   2252614 GA-A-ATA-------------T---------------------T
i Rhinolophus_sinicus.LVEH01000179.1                    I 148 C 0
s Rhinopithecus_bieti.k119_554384                            1442  8 -     17045 TC-T-ATA-------------T---------------------T
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206378930  8 - 206558726 TC-T-ATA-------------T---------------------T
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44857832  8 -  45163003 TC-T-ATA-------------T---------------------T
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                20162  8 +    109198 GA-T-ATA-------------T---------------------T
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            I 148 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       8797  8 +     12214 AA-A-TTA-------------T---------------------T
i Saiga_tatarica.SaiTat_scaffold_82192                  I 152 C 0
s Saimiri_boliviensis.NW_024100938.1                     15673659  8 -  43202129 TA-T-ATA-------------T---------------------T
i Saimiri_boliviensis.NW_024100938.1                    I 1 C 0
s Saimiri_cassiquiarensis.k141_808270                        5572  8 +     34089 TA-T-ATA-------------T---------------------T
i Saimiri_cassiquiarensis.k141_808270                   I 1 C 0
s Saimiri_macrodon.k141_2087127                              5514  8 -     60842 TA-T-ATA-------------T---------------------T
i Saimiri_macrodon.k141_2087127                         I 1 C 0
s Saimiri_oerstedii.k141_841116                              5607  8 +     67014 TA-T-ATA-------------T---------------------T
i Saimiri_oerstedii.k141_841116                         I 1 C 0
s Saimiri_sciureus.k141_1947592                              5585  8 +     60816 TA-T-ATA-------------T---------------------T
i Saimiri_sciureus.k141_1947592                         I 1 C 0
s Saimiri_ustus.k141_1282476                                 5522  8 -     76454 TA-T-ATA-------------T---------------------T
i Saimiri_ustus.k141_1282476                            I 1 C 0
s Sapajus_apella.ctg10                                   17342258  8 -  30362882 TA-T-GTA-------------T---------------------T
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         21619  8 -     62485 TA-T-GTA-------------T---------------------T
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   37530  7 -    114521 at-a-gtg-------------c----------------------
i Scalopus_aquaticus.ScaAqu_scaffold_9300               I 4053 I 22
s Semnopithecus_entellus.k141_1572367                        4662  8 +     15331 TC-T-ATA-------------T---------------------T
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      10037  8 +     20762 TC-T-ATA-------------T---------------------T
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         120043  8 +    130994 TC-T-ATA-------------T---------------------T
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           38821  8 +     46263 TC-T-ATA-------------T---------------------T
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     31966  8 +     42640 TC-T-ATA-------------T---------------------T
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        14988  8 +     30600 TC-T-ATA-------------T---------------------T
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            19728  8 +    739146 AA-A-ATA-------------T---------------------T
i Solenodon_paradoxus.SolPar_flattened_line_1012        I 140 C 0
s Sorex_araneus.JH798170.1                               17767310  8 -  27805282 aa-a-ata-------------t---------------------t
i Sorex_araneus.JH798170.1                              I 152 C 0
s Spermophilus_dauricus.KZ294190.1                        2240603  8 +   2842873 AA-A-TTA-------------T---------------------T
i Spermophilus_dauricus.KZ294190.1                      I 141 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             235917  8 -    276980 AA-A-ATT-------------T---------------------T
i Spilogale_gracilis.SpiGra_flattened_line_905          I 394 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            28431  8 +     62062 AA-A-ATA-------------T---------------------T
i Suricata_suricatta.SurSur_flattened_line_20339        I 145 C 0
s Sus_scrofa.CM000824.4                                 189272941  8 + 218635234 AA-A-TTA-------------T---------------------T
i Sus_scrofa.CM000824.4                                 I 143 C 0
s Symphalangus_syndactylus.tarseq_24                        16162  8 -  13920577 TA-T-ATA-------------T---------------------T
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                1129  8 +     20549 GA-A-ACA-------------T---------------------T
i Tadarida_brasiliensis.TadBra_scaffold_61492           I 152 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               15561  8 +     45698 AA-A-GTG-------------T---------------------T
i Tamandua_tetradactyla.TamTet_scaffold_26877           I 152 C 0
s Tapirus_indicus.TapInd_scaffold_176                      807982  8 +   1148477 AA-A-ATA-------------T---------------------T
i Tapirus_indicus.TapInd_scaffold_176                   I 149 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  58694  8 +     99546 AA-A-ATA-------------T---------------------T
i Tapirus_terrestris.TapTer_scaffold_14939              I 149 C 0
s Theropithecus_gelada.CM009951.1                       194009059  8 - 194193292 TC-T-ATA-------------T---------------------T
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             39823  8 -     47444 AA-A-ATG-------------T---------------------T
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         I 295 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  6366  8 +      6782 AA-A-GTA-------------T---------------------T
i Tolypeutes_matacus.TolMat_scaffold_269431             I 146 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  136914  8 -    259118 GA-A-ATA-------------T---------------------T
i Tonatia_saurophila.TonSau_scaffold_3334               I 148 C 0
s Trachypithecus_auratus.k141_738098                        28147  8 +     38948 TC-T-ATA-------------T---------------------T
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   21869  8 -     32910 TC-T-ATA-------------T---------------------T
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      3281  8 -     12939 TC-T-ATA-------------T---------------------T
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       3199  8 -     14244 TC-T-ATA-------------T---------------------T
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           44596  8 -     54611 TC-T-ATA-------------T---------------------T
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        2393  8 -     11566 TC-T-ATA-------------T---------------------T
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     4576  8 -     15592 TC-T-ATA-------------T---------------------T
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          3228  8 +     14371 TC-T-ATA-------------T---------------------T
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   1515  8 +     12481 TC-T-ATA-------------T---------------------T
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        1389  8 -     24393 TC-T-ATA-------------T---------------------T
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       6639  8 -     28054 TC-T-ATA-------------T---------------------T
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44661423  8 -  44834318 TC-T-ATA-------------T---------------------T
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       3739  8 +     13828 TC-T-ATA-------------T---------------------T
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   5987  8 +     90398 AA-A-TGA-------------T---------------------T
i Tragulus_javanicus.TraJav_scaffold_14717              I 145 C 0
s Trichechus_manatus.JH594618.1                          16086202  8 +  31416278 AA-A-GTA-------------T---------------------T
i Trichechus_manatus.JH594618.1                         I 158 C 0
s Tupaia_chinensis.KB320831.1                             2794248  8 -   3938065 AA-A-ATA-------------T---------------------G
i Tupaia_chinensis.KB320831.1                           I 238 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    6329  8 +     13056 AA-A-ATA-------------T---------------------G
i Tupaia_tana.TupTan_flattened_line_68454               I 129 C 0
s Tursiops_truncatus.MRVK01000923.1                      69314262  8 -  96451834 AA-A-TTA-------------T---------------------T
i Tursiops_truncatus.MRVK01000923.1                     I 137 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   8100 29 +     10241 at-a-atg-------------ttgtaaaccagtgttacctcatt
i Uropsilus_gracilis.UroGra_scaffold_69449              I 5577 C 0
s Ursus_maritimus.KK498671.1                              6515662  8 +  28682327 GC-A-ATA-------------T---------------------T
i Ursus_maritimus.KK498671.1                            I 144 C 0
s Varecia_rubra.k141_432109                                  5969  8 -     20643 AA-T-ATA-------------T---------------------C
i Varecia_rubra.k141_432109                             I 3 C 0
s Varecia_variegata.k141_775891                             25504  8 -     33872 AA-T-ATA-------------T---------------------C
i Varecia_variegata.k141_775891                         I 3 C 0
s Vicugna_pacos.KN269600.1                                1525489  8 -   2331223 aa-a-tta-------------t---------------------t
i Vicugna_pacos.KN269600.1                              I 134 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                139157  8 -    281493 AA-A-ATA-------------T---------------------T
i Vulpes_lagopus.VulLag_flattened_line_2045             I 144 C 0
s Xerus_inauris.XerIna_scaffold_7898                       127721  8 -    134049 AC-G-TTA-------------T---------------------T
i Xerus_inauris.XerIna_scaffold_7898                    I 141 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        215138  8 -    227762 GA-A-ATA-------------T---------------------T
i Zalophus_californianus.ZalCal_flattened_line_4097     I 144 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     16689  8 -     20485 AA-A-ATT-------------T---------------------T
i Zapus_hudsonius.ZapHud_scaffold_64392                 I 153 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           7761  8 -      8775 AA-A-TTA-------------T---------------------T
i Ziphius_cavirostris.ZipCav_flattened_line_127025      I 137 C 0
e Ochotona_princeps.JH802095.1                            4996729 2205 -  23139505 I
e Procavia_capensis.ProCapCap_scaffold_149274                2467 1156 -      9567 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Megaderma_lyra.MegLyr_scaffold_3562                       64783 239 -    234502 I
e Heterohyrax_brucei.HetBruBak_scaffold_25354               61360 1157 +     73687 I
e Echinops_telfairi.JH980316.1                           22999622 301 -  44670279 I
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1008 325 -      5782 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19677 266 -    119109 I
e Microtus_ochrogaster.CM001673.1                        22820377 122 -  98408828 I
e Tarsius_wallacei.k141_48636                               60532 3805 +     65473 I
e Tarsius_lariang.k141_609102                               27216 3812 +     42269 I
e Sigmodon_hispidus.SigHis_scaffold_11332                  100998 122 -    120886 I
e Rattus_norvegicus.chr11                                13915860 1475 +  90463843 I
e Psammomys_obesus.NESX01026517.1                           36232 122 +     77221 I
e Peromyscus_maniculatus.KI615518.1                       4951147 122 -   8017169 I
e Onychomys_torridus.OnyTor_scaffold_12578                  37821 122 +     62360 I
e Ondatra_zibethicus.OndZib_scaffold_6821                  125630 120 +    145789 I
e Nannospalax_galili.KL201303.1                            119159  6 +    362372 I
e Mus_spretus.CM004110.1                                 74333152 260 +  97876770 I
e Mus_pahari.LT608305.1                                  67556620 256 +  89017189 I
e Mus_musculus.chr16                                     75490417 259 +  98207768 I
e Mus_caroli.LT608236.1                                  70767340 259 +  92629107 I
e Mesocricetus_auratus.KB708139.1                         1047652 119 -  26018355 I
e Meriones_unguiculatus.MerUng_scaffold_52233               13942 122 +     15977 I
e Ellobius_talpinus.LOJH01090055.1                           7187 122 -      7838 I
e Ellobius_lutescens.LOEQ01003611.1                        240062 122 -    369425 I
e Dolichotis_patagonum.DolPat_scaffold_14102                36772 276 -     73477 I
e Dasyprocta_punctata.DasPun_flattened_line_634             59553 276 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                18462 277 +     26546 I
e Cricetulus_griseus.LT883672.1                          53029979 121 +  72327488 I
e Cricetomys_gambianus.CriGam_scaffold_949                 279183 147 -    399297 I
e Colobus_angolensis.KN985967.1                          10887472 517 +  10971483 I
e Cephalopachus_bancanus.k141_702587                         8788 3391 +     21754 I
e Cavia_tschudii.CavTsc_scaffold_488                       177453 271 +    436027 I
e Cavia_porcellus.DS562889.1                             15799262 290 -  24440124 I
e Cavia_aperea.AVPZ01000278.1                            15787326 288 -  24422027 I
e Carlito_syrichta.NW_007248099.1                          309764 3411 +    345090 I
e Acomys_cahirinus.AcoCah_scaffold_1625                    113481 121 -    189883 I
e Pan_paniscus.CM003386.1                               127575888 480 - 205426864 I
e Pan_troglodytes.CM009241.2                            120153042 480 - 196562556 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               14823 37 +    209709 TC-TGAA---CACATTGG-CA-GATGTAAA----T--GACA----AA--GT--T-A----T---A
s Acinonyx_jubatus.LLWD01000356.1                         2034863 23 +   3721120 gc-tgaa---CATACTG-ACA-GATTTGA------------------------------------
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10658183 28 +  23371972 GC-CAAA---CACACTG-ACA-GATGTGCA----T--GAC-------------------------
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 I 8
s Ailurus_fulgens.LNAC01000003.1                          7095535 28 -  16596857 GC-TGAA---CACACTG-ACA-GATGTGCA----T--GAC-------------------------
i Ailurus_fulgens.LNAC01000003.1                        C 0 I 7
s Allactaga_bullata.AllBul_scaffold_70162                   17781 35 -     22067 GC-TGAA---CATGTTG-ACA-GATGTGAA----C--AGC-----A---AA--G-A----T---T
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   2549 37 -     60446 TC-TGAA---CACATTGG-TA-CATGTAAA----T--GACA----AA--GT--T-A----T---A
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         3266 37 -     29318 TC-TGAA---CACATTGG-TA-GATGTAAA----T--GATA----AA--GT--T-A----T---A
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         2202 37 +     38766 TC-TGAA---CACATCGG-TA-GATGTAAA----T--GATA----AA--GT--T-A----T---A
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          3160 37 -     80423 TC-TGAA---CACATTGG-TA-GATGTAAA----T--GATA----AA--GT--T-A----T---A
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            11133 38 -     18050 TC-TGAA---CACATTGA-CA-GATGTGGA----A--GACA----AAA-GT--T-A----T---A
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_1710068                                849 38 +      1555 TC-TGAA---CACATTGA-CA-GATGTGGA----A--GACA----AAA-GT--T-A----T---A
i Alouatta_caraya.k141_1710068                          C 0 C 0
s Alouatta_discolor.k141_811576                             11806 38 -     21359 TC-TGAA---CACATTGA-CA-GATGTGGA----A--GACA----AAA-GT--T-A----T---A
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                1429 38 +      2129 TC-TGAA---CACATTGA-CA-GATGTGGA----A--GACA----AAA-GT--T-A----T---A
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_2177643                           813 38 -      1868 TC-TGAA---CACATTGA-CA-GATGTGGA----A--GACA----AAA-GT--T-A----T---A
i Alouatta_macconnelli.k141_2177643                     C 0 C 0
s Alouatta_nigerrima.k141_3537692                             862 38 +      1660 TC-TGAA---CACATTGA-CA-GATGTGGA----A--GACA----AAA-GT--T-A----T---A
i Alouatta_nigerrima.k141_3537692                       C 0 C 0
s Alouatta_palliata.k141_2764429                              775 38 -      1480 TC-TGAA---CACATTGA-CA-GATGTGGA----A--GACA----AAA-GT--T-A----T---A
i Alouatta_palliata.k141_2764429                        C 0 C 0
s Alouatta_puruensis.k141_131505                               69 38 +      4855 TC-TGAA---CACATTGA-CA-GATGTGGA----A--GACA----AAA-GT--T-A----T---A
i Alouatta_puruensis.k141_131505                        C 0 C 0
s Alouatta_seniculus.k141_1531728                             990 38 -      1692 TC-TGAA---CACATTGA-CA-GATGTGGA----A--GACA----AAA-GT--T-A----T---A
i Alouatta_seniculus.k141_1531728                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3520979 35 +   4113121 GC-CAAA---CACATTG-ACA-GATATAAA----A--GAC-----A---GT--G-A----T---T
i Ammotragus_lervia.NIVO01013474.1                      C 0 I 9
s Anoura_caudifer.AnoCau_scaffold_422                      391377 36 -    631301 GTTTGAA---TAGGTTG-GCA-AATATGAA----T--AAC-----C-AAGT--T-A---------
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            31560 35 +     33004 GC-CAAA---CACATTG-ACA-GATACAAA----T--GAC-----A---GT--T-A----T---T
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 63480 38 +     78111 TC-TAAA---CACATGGA-CA-GATGTGGA----T--GACA----AAA-GT--T-A----T---A
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            6422 38 +     22701 TC-TGAA---CACATGGA-CA-GATGTGGA----T--GACA----AAA-GT--T-A----T---A
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5750379 38 +   9889416 TC-TGAA---CACATGGA-CA-GATGTGGA----T--GACA----AAA-GT--T-A----T---A
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             6968 38 -    104377 TC-TGAA---CACATGGA-CA-GATGTGGA----T--GACA----AAA-GT--T-A----T---A
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               6970 38 +     23246 TC-TGAA---CACATGGA-CA-GATGTGGA----T--GACA----AAA-GT--T-A----T---A
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     4518 30 +      5067 ---TAAA---CACATTG-AC---ATATGAA----T--TAA-----A----A--T-G----T---T
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 I 10
s Arctocebus_calabarensis.k141_587554                        1764 36 +      9265 GC-CATA---CACATTG--CA-GATGTGTG----T--GACC----AA--GT--T-A----T---T
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 9794 36 -     29036 GTTTGAG---TAGGTTG-ACA-AGTATGAA----T--GAC-----A-AAGT--T-A---------
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9540244 38 +  39197703 TC-TGAA---CACCTTGA-CA-GATGTGGA----T--GACA----AAA-GT--T-A----T---A
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             61515 38 +     85812 TC-TGAA---CACCTTGA-CA-GATGTGGA----T--GACA----AAA-GT--T-A----T---A
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                12528 38 +     89302 TC-TGAA---CACCTTGA-CA-GATGTGGA----T--GACA----AAA-GT--T-A----T---A
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             17031 38 -     58268 TC-TGAA---CACCTTGA-CA-GATGTGGA----T--GACA----AAA-GT--T-A----T---A
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             65023 38 +    119057 TC-TGAA---CACCTTGA-CA-GATGTGGA----T--GACA----AAA-GT--T-A----T---A
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               6994 38 -     25888 TC-TGAA---CACCTTGA-CA-GATGTGGA----T--GACA----AAA-GT--T-A----T---A
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 7500 36 -     16375 AC-CAAA---CATATTA--TA-GATGTTCA----T--GACC----AA--GT--T-A----T---T
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               1116 36 +      6337 AC-CAAA---CATATTA--CA-GATGTTCA----T--GACC----AA--GT--T-A----T---T
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26381037 37 +  51448160 GC-TGAA---CACATTG-ACA-AATATGAA----T--GAC--A-AA---GT--T-A----T---C
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        6209 37 -     13118 GC-TGAA---CACATTG-ACA-GATATGAA----T--GAC--A-AA---GT--T-A----T---C
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   44085 35 -     72089 GC-CAAA---CACATTG-ACA-GATATAAA----A--GAC-----A---GT--G-A----T---T
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 I 9
s Bison_bison.KN264915.1                                  6560703 35 +   6870073 gc-CAAA---CACATTG-ACA-GATATAAA----T--GAC-----A---GT--T-A----T---T
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138140818 35 - 161108492 gc-CAAA---CACATTG-ACA-GATATAAA----T--GAC-----A---GT--T-A----T---T
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     573359 35 -    998990 gc-CAAA---CACATTG-ACA-GATATAAA----C--GAC-----A---GT--T-A----T---T
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136296551 35 - 158972876 gc-CAAA---CACATTG-ACA-GATATAAA----T--GAC-----A---GT--T-A----T---T
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1233633 35 -   1914593 gC-CAAA---CACATTG-ACA-GATATAAA----T--GAC-----A---GT--T-A----T---T
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               114881 38 -    171031 TC-TGAA---TGTATTGA-CA-GATGTGGA----T--GACA----AAA-GT--T-A----T---A
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 13910 38 +    125063 TC-TGAA---TGTATTGA-CA-GATGTGGA----T--GACA----AAA-GT--T-A----T---A
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                15953 38 -    216513 TC-TGAA---TGTATTGA-CA-GATGTGGA----T--GACA----AAA-GT--T-A----T---A
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        8496 38 -    134917 TC-TGAA---TGTATTGA-CA-GATGTGGA----T--GACA----AAA-GT--T-A----T---A
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3220393 30 -   8989139 gg-TGAT---CACATTG-ATA-GATGTGAA----T--GAT-----A---G---------------
i Camelus_bactrianus.KN276303.1                         C 0 I 2
s Camelus_dromedarius.KN271192.1                           398094 30 -  15254737 gg-TGAT---CACATTG-ATA-GATGTGAA----T--GAC-----A---G---------------
i Camelus_dromedarius.KN271192.1                        C 0 I 2
s Camelus_ferus.KB016973.1                                2973830 30 +   6889770 gg-TGAT---CACATTG-ATA-GATGTGAA----T--GAT-----A---G---------------
i Camelus_ferus.KB016973.1                              C 0 I 2
s CanFam4.chr31                                          11520328 28 +  39901454 GC-TGAA---CACAATG-ATG-AAGATAAA----T--GAC-------------------------
i CanFam4.chr31                                         C 0 I 223
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   15353 28 +     87036 GC-TGAA---CACAATG-ATG-AAGATAAA----T--GAC-------------------------
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 I 223
s Canis_lupus_dingo.QKWQ01001993.1                       11266995 28 -  35597290 gc-tgAA---CACAATG-ATG-AAGATAAA----T--GAC-------------------------
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 I 225
s Canis_lupus_familiaris.chr31                           11089529 28 +  39895921 gc-tgAA---CACAATG-ATG-AAGATAAA----T--GAC-------------------------
i Canis_lupus_familiaris.chr31                          C 0 I 224
s Canis_lupus_orion.HG994411.1                           16456543 28 -  44759192 gc-tgAA---CACAATG-ATG-AAGATAAA----T--GAC-------------------------
i Canis_lupus_orion.HG994411.1                          C 0 I 223
s Capra_aegagrus.CM003214.1                              21326054 35 + 157394656 GC-CAAA---CACATTG-ACA-GATATAAA----A--GAC-----A---GT--G-A----T---T
i Capra_aegagrus.CM003214.1                             C 0 I 9
s Capra_hircus.CM004562.1                               135707282 35 - 157403528 GC-CAAA---CACATTG-ACA-GATATAAA----A--GAC-----A---GT--G-A----T---T
i Capra_hircus.CM004562.1                               C 0 I 9
s Carollia_perspicillata.CarPer_scaffold_4436               60584 36 +     67245 GTTTGAG---TAGGTCG-ACA-AATATGAA----T--GAC-----A-AAGT--T-A---------
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   31948 36 +     33760 GA-TGAG---CACATTG-ACA-TATGTGAA----G--GAC-----A-A-GT--T-A----T---T
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   159718 37 -    276539 GC-TGAA---TACACTG-ACA-TATGTGAA----T--GAC--A-AA---GT--T-A----T---T
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18891721 38 -  29618158 TC-TGAA---CACATGGA-CA-GATGTGGT----T--GACA----AAA-GT--T-A----T---A
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 9265 38 -     26817 TC-TGAA---CACATGGA-CA-GATGTGGT----T--GACA----AAA-GT--T-A----T---A
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                13508 38 +     25043 TC-TGAA---CACATGGA-CA-GATGTGGT----T--GACA----AAA-GT--T-A----T---A
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4364751 37 +   7569818 gc-aGAG---AACACTG-ACA-GATGTGAA----T--GAC--A-AA---GT--T-A----T---G
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         4508 37 -      9338 GC-AGAG---AACACTG-ACA-GATGTGAA----T--GAC--A-AA---GT--T-A----T---G
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6556496 37 +   6739814 TC-TGAA---CACATTGG-TA-GATGTAAA----T--GACA----AA--GT--T-A----T---A
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      27970 37 +     60454 TC-TGAA---CACATTGG-TA-GATGTAAA----T--GACA----AA--GT--T-A----T---A
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          3177 37 -     21101 TC-TGAA---CACATTGG-TA-GATGTAAA----T--GACA----AA--GT--T-A----T---A
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         60487 37 -    107033 TC-TGAA---CACATTGG-TA-GATGTAAA----T--GACA----AA--GT--T-A----T---A
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        3366 37 -     17608 TC-TGAA---CACATTGG-TA-CATGTAAA----T--GACA----AA--GT--T-A----T---A
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                           525 37 +     45019 TC-TGAA---CACATTGG-TA-CATGTAAA----T--GACA----AA--GT--T-A----T---A
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                            609 37 +     15177 TC-TGAA---CACATTGG-TA-CATGTAAA----T--GACA----AA--GT--T-A----T---A
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          3409 37 +     16677 TC-TGAA---CACATTGG-TA-CATGTAAA----T--GACA----AA--GT--T-A----T---A
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           25578 37 +     35983 TC-TGAA---CACATTGG-TA-CATGTAAA----T--GACA----AA--GT--T-A----T---A
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11992107 37 +  12117833 TC-TGAA---CACATTGG-TA-CATGTAAA----T--GACA----AA--GT--T-A----T---A
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46478864 37 +  46592721 TC-TGAA---CACATTGG-TA-CATGTAAA----T--GACA----AA--GT--T-A----T---A
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      42419 37 -     45581 TC-TGAA---CACATTGG-TA-CATGTAAA----T--GACA----AA--GT--T-A----T---A
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       3421 37 +     35577 TC-TGAA---CACATTGG-TA-CATGTAAA----T--GACA----AA--GT--T-A----T---A
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        3194 37 -     25661 TC-TGAA---CACATTGG-TA-CATGTAAA----T--GACA----AA--GT--T-A----T---A
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        3174 37 -     17744 TC-TGAA---CACATTGG-TA-CATGTAAA----T--GACA----AA--GT--T-A----T---A
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        22779 37 +     37128 TC-TGAA---CACATTGG-TA-CATGTAAA----T--GACA----AA--GT--T-A----T---A
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           3636 37 -      6963 GC-TGAA---CACATTC-ACA-ATGGTGAA----T--GAC-----A-AGGT--T-A----T---C
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           59775 36 -     68416 AT-CAAA---TACATTA--CA-GATGTTCA----T--GACC----AA--GT--T-A----T---T
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            8823 36 +     13308 AC-CAAA---TACATTA--CA-GATGTTCA----T--GACC----AA--GT--T-A----T---T
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             6538 38 -     18223 TC-TGAA---CACATTGA-CA-GATGTGAA----T--GACA----AAA-GT--T-A----T---A
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             23556 38 +     25473 TC-TGAA---CACATTGA-CA-GATGTGAA----T--GACA----AAA-GT--T-A----T---A
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           42596 38 +     57117 TC-TGAA---CACATTGA-CA-GATGTGAA----T--GACA----AAA-GT--T-A----T---A
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          47275 38 +     54541 TC-TGAA---CACATTGA-CA-GATGTGAA----T--GACA----AAA-GT--T-A----T---A
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15962566 37 +  43084221 gC-TGCA---TACACTG-ACA-AATTTGAA----T--AAC--A-AA---GT--T-A----T---C
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         72082 38 +    196370 TC-TGAA---CATATTGA-CA-GATGTGGA----T--GACA----AAA-GT--T-A----T---A
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          16262 38 +     40510 TC-TGAA---CATATTGA-CA-GATGTGGA----T--GACA----AAA-GT--T-A----T---A
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15140776 37 -  15256731 TC-TGAA---CACATTGG-TA-GATGTAAA----T--GATA----AA--GT--T-A----T---A
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      35385 37 -     53260 TC-TGAA---CACATTGG-TA-GATGTAAA----T--GATA----AA--GT--T-A----T---A
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101145944 37 + 101219884 TC-TGAA---CACATTGG-TA-TATGTAAA----T--GATA----AA--GT--T-A----T---A
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                17346 42 -     21363 GC-TAAA---CACATTG-ACAAGCTGTGAATGACA--GAC-----A-AGTT--T-A----T---C
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           762651 42 +    964067 GC-TAAA---CACATTG-ACAAGCTGTGAATGACA--GAC-----A-AGTT--T-A----T---C
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_guereza.LG08                                  147665864 37 + 156195979 TC-TGAA---CACACTGG-TA-GATGTAAA----T--GACA----AA--GT--T-A----T---G
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            17847 37 +     23629 TC-TGAA---CACATTGG-TA-GATGTAAA----T--GACA----AA--GT--T-A----T---G
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60620409 24 +  78930452 GA-CCAA-----CACTG-ACA-GATATGAA----T--G---------------------------
i Condylura_cristata.JH655880.1                         C 0 I 12
s Crocidura_indochinensis.CroInd_scaffold_848148              396 26 +      1327 GG-TGAA---TATTTTG-AAG-GATGTAAA----T--G---------------------------
i Crocidura_indochinensis.CroInd_scaffold_848148        C 0 I 9
s Cryptoprocta_ferox.CryFer_flattened_line_19014            52886 28 -     70449 GC-TGAA---CATACTG-ACA-GATGTGAA----T--GAC-------------------------
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 I 9
s Ctenodactylus_gundi.CteGun_scaffold_447                  209307 25 -    956709 --------------TTG-ACA-TACTTGAA----T--CGC-----A---TT--T-A----T---T
i Ctenodactylus_gundi.CteGun_scaffold_447               I 2 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 31915 37 -     67205 GC-TGAA---TACATTA-ACA-GATTTGAA----T--AAC--A-AG---AT--T-A----T---T
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          184482 37 -   6883506 GC-TGAA---CACACTG-AAA-ACAGTGAA----T--GAC-----A-AGGT--T-A----T---C
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16845646 36 +  31942871 AC-CGAA---CACATTG--CA-GATGTGCA----T--GACC----AA--GT--T-A----T---T
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80037667 35 -  96802777 GC-TGAA---CACATTG-ACA-GATATGAA----T--GAC-----A---GT--T-A----T---C
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18699870 36 -  18957592 gTTTGAG---TAGGCTG-ACA-AATATGAA----T--GAG-----A-AAGT--T-A---------
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 323403 37 +    993696 gc-GGAG---AACACTG-ACA-GATGTGAA----T--GAC--A-AA---GT--T-A----T---G
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   4055 37 +    151128 GC-AGAG---AACACTG-ACA-GATGTGAA----T--GAC--A-AA---GT--T-A----T---G
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   157765 37 +    228994 GC-TGCA---TACACTG-ACA-AACTTGAA----C--AAC--A-AA---GT--T-A----T---C
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3657219 37 +   4240102 TG-CAGA---CACATTG-ACA-AATGTCAA----TAAGAA-----A---GT--T-A----T---T
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_44365                 28862 37 +     28912 TG-CAGA---CACATTG-ACA-AATGTCAA----TAAGAA-----A---GT--T-A----T---T
i Dipodomys_stephensi.DipSte_scaffold_44365             C 0 N 0
s Echinops_telfairi.JH980316.1                           22999923  2 -  44670279 ------------------------------------------------------------t---c
i Echinops_telfairi.JH980316.1                          I 301 C 0
s Eidolon_helvum.KE772537.1                                 13110 37 +     24177 GC-TAAA---CACATTG-ACA-GATTTGAA----T--Gac-----a---a---a-g----ttatt
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1492319 35 +   1727528 GC-CAAA---CACATCG-ACA-GATATAAA----T--GAC-----A---GT--T-A----T---T
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7829579 36 +  15467074 GT-TGAA---AATATTC-ATA-GCTATAAA----T--GAC-----A-ATAT--T-A----T----
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85873071 14 +  99434291 -------------------CA-GATGTGAA----T--GAC-------------------------
i Enhydra_lutris.KZ291749.1                             I 11 I 8
s Eptesicus_fuscus.JH977687.1                             4707807 37 +   6522550 AC-TGAA---CACATTG-ACA-GATGTGAA----T--GAC--A-AC---CT--T-A----T---T
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5854051 37 -   7175178 gc-tgaa---cACGCTG-ATA-GATATGAA----T--GGC--A-AA---GT--T-A----T---A
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13352551 37 +  41866177 gc-tgaa---cACGCTG-ATA-GATATGAA----T--GGC--A-AA---GT--T-A----T---A
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          14041 37 +     92910 gc-tgaa---cACGCTG-ATA-GATATGAA----T--GGC--A-AA---GT--T-A----T---A
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erythrocebus_patas.Contig8                             48777955 37 -  48907691 TC-TGAA---CACATTGG-TA-GATGTAAA----T--GATA----AA--GT--T-A----T---A
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          315877 37 +    330699 GC-TGAA---CACATTG-ACA-GATATGAA----T--GAC--A-AA---GT--T-A----T---C
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             62333 37 +     89355 GT-TGAA---CACATTG-ACA-GATATGAA----T--GAC--A-AA---GT--T-A----T---C
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              5821 36 +     13586 AT-TGAA---CACATTA--CA-GATGTGCA----T--GACC----AA--AT--T-A----T---T
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               5753 36 -      6809 AT-TGAA---CACATTA--CA-GATGTGCA----T--GACC----AA--AT--T-A----T---T
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            12227 36 +     36558 AT-TGAA---CACGTTA--CA-GATGTGCA----T--GACC----AA--AT--T-A----T---T
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             8548 36 +     60246 AT-TGAA---CACATTA--CA-GATGTGCA----T--GACC----AA--AT--T-A----T---T
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                12026 36 +    109717 AT-TGAA---CACATTA--CA-GATGTGCA----T--GACC----AA--AT--T-A----T---T
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                   11 36 -     19505 AT-TGAA---CACATTA--CA-GATGTGCA----T--GACC----AA--AT--T-A----T---T
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                16686 36 +     27497 AT-TGAA---CACATTA--CA-GATGTGCA----T--GACC----AA--AT--T-A----T---T
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           19142 36 +     26808 AT-TGAA---CACATTA--CA-GATGTGCA----T--GACC----AA--AT--T-A----T---T
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                33880 36 +     46535 AT-TGAA---CATATTA--CA-GATGTGCA----T--GACC----AA--AT--T-A----T---T
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              16606 36 -     29447 AT-TGAA---CACATTA--CA-GATGTGCA----T--GACC----AA--AT--T-A----T---T
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129893835 23 - 159252932 gc-tCAA---CATACTG-ACA-gatttga------------------------------------
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129280919 23 - 158578461 gc-tCAA---CATACTG-ACA-GATTTGA------------------------------------
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 22059 23 +     52776 GC-TGAA---CATACTG-ACA-GATTTGA------------------------------------
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13892228 37 -  19261668 GC-TGGG---TGCATTG-ACA-CACTTGAA----T--AAT--A-AA---GT--C-A----T---T
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     211671 36 -    847004 GT-CATA---CACATTG--CA-GATGTGCA----T--GACC----AA--GT--T-A----T---T
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           14045 36 -     43889 GT-CATA---CACATTG--CA-GATGTGCA----T--GACC----AA--GT--T-A----T---T
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          11111 36 +     27357 GT-CATA---CACATTG--CA-GATGTGCA----T--GACC----AA--GT--T-A----T---T
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               157154 35 +    324696 GC-TGAA---CACATTG-AGT-GATG--AA----T--GACA----AA--GT--T-A----T---T
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    182095 35 -    189561 GC-CAAA---CACACTG-ACA-GATATAAA----T--GAC-----A---GT--T-A----T---T
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           14621 33 -     18683 -T-TGAA---CATATTG-ACA-TGTGTGGA----T--GAT-----G----T--T-A----T---T
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               6533 37 -     14630 TC-TGAA---CACATTGG-CA-GATGTAAA----T--GACA----AA--GT--T-A----T---A
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119653633 37 - 195582420 TC-TGAA---CACATTGG-CA-GATGTAAA----T--GACA----AA--GT--T-A----T---A
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   78039 34 +    118900 GT-TGAA---CATATTG-TCA-TATGTGAA----T--GCT-----G----T--T-A----T---T
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         2607 36 +     10286 AT-TGAA---CACATTA--CA-GATATGCA----T--GACC----AA--AT--T-A----T---T
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             1087 36 -     11661 AT-TGAA---CACATTA--CA-GATATGCA----T--GACC----AA--AT--T-A----T---T
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             6413 36 +     56096 AT-TGAA---CACATTA--CA-GATATGCA----T--GACC----AA--AT--T-A----T---T
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        29662 36 -     42470 AT-TGAA---CACATTA--CA-GATATGCA----T--GACC----AA--AT--T-A----T---T
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        46290 36 -     54384 AT-TGAA---CACATTA--CA-GATATGCA----T--GACC----AA--AT--T-A----T---T
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              18083 28 +     53719 GC-TGAA---CATACTG-ATA-GATGTGAA----T--GAC-------------------------
i Helogale_parvula.HelPar_flattened_line_22962          C 0 I 9
s Hemitragus_hylocrius.HemHyl_scaffold_16669                28339 35 -     91191 GC-CAAA---CACATTG-ACA-GATATAAA----A--GAC-----A---GT--G-A----T---T
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 I 9
s Heterocephalus_glaber.JH602058.1                        2551946 37 +  31725842 GC-TGGA---TGCATTG-ACA-GACTTGAA----T--AAT--A-AA---GT--T-A----C---T
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              147971 37 +    277961 GC-CAAA---CACATTG-ACA-GATATGAA----T--GAC--A-AA---GT--T-A----T---C
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      279265 37 -    477199 gc-taaA---TTCATTG-ACA-CATGTGAA----T--GAC-----A---A---A-GTTATT----
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_345408               266 37 -       919 GC-TAAA---TTTATTG-ACA-CATGTGAA----T--GAC-----A---A---A-GTTATT----
i Hipposideros_galeritus.HipGal_scaffold_345408         C 0 C 0
s Hoolock_leuconedys.ctg79                                      6220 37 -   7690867 TC-TGAA---CACATTGG-CA-GATGTAAA----T--GACA----AA--GT--T-A----T---A
i Hoolock_leuconedys.ctg79                                 I 8 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 18155 27 -     67322 GC-TGAA---CATA-TG-AAA-GATGTGAA----T--GAC-------------------------
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 I 9
s Hylobates_abbotti.k141_164775                              1001 37 -      2073 TC-TGAA---CACATTGG-CA-GATGTAAA----T--GACA----AA--GT--T-A----T---A
i Hylobates_abbotti.k141_164775                         C 0 C 0
s Hylobates_agilis.k141_1362131                                12 37 +      1075 TC-TGAA---CACATTGG-CA-GATGTAAA----T--GACA----AA--GT--T-A----T---A
i Hylobates_agilis.k141_1362131                         C 0 C 0
s Hylobates_klossii.k141_285563                               738 37 +      1026 TC-TGAA---CACATTGG-CA-GATGTAAA----T--GACA----AA--GT--T-A----T---A
i Hylobates_klossii.k141_285563                         I 23 I 150
s Hylobates_pileatus_b.ContigUN                                 14625909 37 -  25970782 TC-TGAA---CACATTGG-CA-GATGTAAA----T--GACA----AA--GT--T-A----T---A
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_950183                              604 37 +      2027 TC-TGAA---CACATTGG-CA-GATGTAAA----T--GACA----AA--GT--T-A----T---A
i Hylobates_muelleri.k141_950183                        C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             35069 37 -     60944 TC-TGAA---CACATTGG-CA-GATGTAAA----T--GACA----AA--GT--T-A----T---A
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     7014 37 +     22540 GC-TGGA---TGCACTG-AAA-GGTTTGAA----T--AAC--A-AA---GT--T-A----T---T
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7126695 37 +  13083262 GC-TGAA---CACATTA-ATG-GATATGAA----T--GAC-G-T-A--G-C--T-A----T---C
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_5141390                                   1133 36 -      3181 AC-CAAA---CACATTA--CG-GATGTTCA----T--GACC----AA--GT--T-A----T---T
i Indri_indri.k141_5141390                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               9873 35 +     17520 GC-TGAA---CACATTG-ACA-GATATGAA----T--GAC-----C---GT--T-A----T---C
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8566794 35 +  11848649 GC-TGAA---CATGTTG-ATA-GATGTGAG----T--AGC-----A---AA--G-A----T---T
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               24473 37 +     37189 GC-TGAA---CACTTTG-ACA-GATATGAA----T--GAC--A-AA---GT--T-A----T---C
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          51113 38 -    147782 TC-TGAA---CACCTTGA-CA-GATGTGGA----T--GACA----AAA-GT--T-A----T---A
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    4478 37 +     26176 AC-TGAA---CACACTG-ACA-GATGTGAA----T--GAC--A-AC---CT--T-A----T---T
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258407969 36 - 285822530 AT-TGAA---CACATTA--CA-GATGTGCA----T--GACC----AA--AT--T-A----T---T
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        24719 36 +     39228 AC-CGAA---CACATTA--CA-GATGTTCA----T--GATC----AA--GT--T-A----T---T
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            54105 36 +     63517 AC-CGAA---CACATTA--CA-GATGTTCA----T--GATC----AA--GT--T-A----T---T
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        79367 36 +    116806 AC-CGAA---CACATTA--CA-GATGTTCA----T--GATC----AA--GT--T-A----T---T
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     32358 36 -     33031 AC-CGAA---CACATTA--CA-GATGTTCA----T--GATC----AA--GT--T-A----T---T
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3086846 25 -   3498232 gc-tgaa---cACACTG-ACA-GATGTGAA----T------------------------------
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    14172 28 +     22452 CC-TGAA---CATACAA-ACC-AATGTAAT----T--GGT-------------------------
i Lepus_americanus.LepAme_scaffold_62849                C 0 I 9
s Lipotes_vexillifer.KE558548.1                            136829 35 +   3060487 GC-TGAG---CACACTG-ACA-GATATGAA----T--GAC-----A---GT--T-A----T---C
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19249573 37 +  19376315 TC-TGAA---CACATTGG-TA-GATGTAAA----T--GACA----AA--GT--T-A----T---A
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           11405 36 +     84689 GT-TATA---CACATTG--CA-GATGTGCA----T--GACC----AA--GT--T-A----T---T
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3779154 36 +   6799190 GT-TATA---CACATTG--CA-GATGTGCA----T--GACC----AA--GT--T-A----T---T
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20595688 37 -  62548349 GC-TGAC---CATATTG-ATG-GTTGTGAA----T--GAC-----A-ATGT--T-A----T---C
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11088985 28 +  39895028 GC-TGAA---CACAATG-ATG-AAGATAAA----T--GAC-------------------------
i Lycaon_pictus.CM007556.1                              C 0 I 224
s Macaca_arctoides.k141_2201161                             21330 37 +     74745 TC-TGAA---CACATTGG-TA-GATGTAAA----T--GACA----AA--GT--T-A----T---A
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12707790 37 +  12821369 TC-TGAA---CACATTGG-TA-GATGTAAA----T--GACA----AA--GT--T-A----T---A
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                 368 37 -     26467 TC-TGAA---CACATTGG-TA-GATGTAAA----T--GACA----AA--TT--T-A----T---A
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           48237 35 +     63263 TC-TGAA---CACATTGG-TA---TGTAAA----T--GACA----AA--GT--T-A----T---A
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                  345 37 -     26361 TC-TGAA---CACATTGG-TA-GATGTAAG----T--GACA----AA--GT--T-A----T---A
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 3522 37 -      7381 TC-TGAA---CACATTGG-TA-GATGTAAA----T--GACA----AA--GT--T-A----T---A
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  46760 37 -     79256 TC-TGAA---CACATTGG-TA-GATGTAAA----T--GACA----AA--GT--T-A----T---A
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196036862 37 + 196197964 TC-TGAA---CACATTGG-TA-GATGTAAA----T--GACA----AA--TT--T-A----T---A
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11447028 37 +  11645122 TC-TGAA---CACATTGG-TA-GATGTAAA----T--GACA----AA--GT--T-A----T---A
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   5714 37 -     46448 TC-TGAA---CACATTGG-TA-GATGTAAA----T--GACA----AA--GT--T-A----T---A
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                3380 37 -     13212 TC-TGAA---CACATTGG-TA-GATGTAAA----T--GACA----AA--GT--T-A----T---A
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 17057 37 -     55006 TC-TGAA---CACATTGG-TA-GATGTCAA----T--GACA----AA--GT--T-A----T---A
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43842163 37 +  43892939 TC-TGAA---CACATTGG-TA-GATGTAAA----T--GACA----AA--GT--T-A----T---A
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               18344 37 -     24607 TC-TGAA---CACATTGG-TA-GATGTAAA----T--GACA----AA--TT--T-A----T---A
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               5711 37 -     27140 TC-TGAA---CACATTGG-TA-GATGTAAA----T--GACA----AA--GT--T-A----T---A
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                701830 32 +    802869 GC-TAAA---CACATTG-ACG-GATTTGAA----T--GAC-----A---A---A-A---------
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 I 1
s Mandrillus_leucophaeus.scaffold125                     43438745 37 -  43563597 TC-TGAA---CACATTGG-TA-GATGTAAA----T--GACA----AA--GT--T-A----T---A
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4451559 37 -   4543643 TC-TGAA---CACATTGG-TA-GATGTAAA----T--GACA----AA--GT--T-A----T---A
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            146934 24 +    252755 GC-TGAA---CACACTG-ACA-GATGTGAG-----------------------------------
i Manis_javanica.JSZB01003966.1                         C 0 I 2
s Manis_pentadactyla.KN017078.1                             37078 24 +     58827 GC-TGAA---CACACTG-ACA-GATGTGAG-----------------------------------
i Manis_pentadactyla.KN017078.1                         C 0 I 2
s Marmota_marmota.CZRN01000005.1                         36874615 37 +  64221397 gt-TGAA---CATATTA-ATG-GATATGAA----T--GAC-G-T-T--G-C--T-A----T---C
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             1869 28 -     87323 GC-TGAA---CACACTG-ACA-GATGTGAA----T--GAC-------------------------
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 I 8
s Mesoplodon_bidens.MesBid_scaffold_227248                   1152 37 -      1377 GC-TGCA---CACATTG-ACA-GATATGAA----T--GAC--A-AA---GT--T-A----T---C
i Mesoplodon_bidens.MesBid_scaffold_227248              C 0 N 0
s Microcebus_murinus.CM007691.1                          16510991 36 +  47401472 AC-CAAA---TACATTA--CA-GATGTTCA----T--GACC----AA--GT--T-A----T---T
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  39103 13 -     48017 gc-tgac---cataagg------------------------------------------------
i Microgale_talazaci.MicTal_scaffold_34660              C 0 I 119
s Micronycteris_hirsuta.MicHir_scaffold_37978               23774 36 -     32043 GTTTGAG---TAGATTG-ACA-AATATGAA----T--GAC-----A-AAGT--T-A---------
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8211837 37 +  10048721 GC-TGAG---CACATTG-ACA-GATGTCAA----T--GAT--A-AA---GT--T-A----T---T
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            36326 37 +     45743 GC-TGAG---CACATTG-ACA-GATGTGAA----T--GAT--A-AA---GT--T-A----T---T
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         3306 37 +     29742 TC-TCAA---CACATTGG-TA-CATGTAAA----T--GACA----AA--GT--T-A----T---A
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        12362 28 -    104932 GC-TGAA---CACACTG-ACA-GATGTGAA----T--GAC-------------------------
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 I 8
s Mirza_zaza.k141_226143                                     6380 36 +      8497 AC-CAAA---TACATTA--CA-GATGTTCA----T--GACC----AA--GT--T-A----T---T
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 147257 35 +    154973 GC-TGAA---CACATTG-ACA-GATATGAA----T--GAC-----A---GT--T-A----T---C
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                162296 36 +    265003 GTTTGAG---TACATTG-ACA-AATGTGAA----T--AAC-----A-AAGT--T-A---------
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  2350 35 -     19904 GC-CAAA---CACATTG-ACA-GATATAAA----T--GAC-----A---GT--T-A----T---T
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  145780 28 -    168139 GC-TGAA---CATATTG-ATA-GATGTGAA----T--GAC-------------------------
i Mungos_mungo.MunMun_flattened_line_8729               C 0 I 9
s Murina_feae.MurFea_scaffold_2254                          23292 37 -    100666 AC-TGAG---CACATTG-ACA-GATGTGAA----T--GAC--A-GC---CT--T-A----T---T
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             13132 25 +     98495 GT-TGAA---CATCTTG-ACA-TATATAAA----T------------------------------
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 I 6
s Mustela_putorius.JH417978.1                             4425240 28 -  28371801 gc-tgaA---CACAACA-ACA-GATGTGAA----T--GAC-------------------------
i Mustela_putorius.JH417978.1                           C 0 I 8
s Myocastor_coypus.MyoCoy_scaffold_3653                     91243 37 -    117718 GG-TGAA---TACATTG-ACA-GATTTGAA----T--ATC--A-AA---GT--T-A----T---T
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               969912 37 +   8389877 ac-TGAG---CACATTG-ACA-GATGTGAA----T--GAC--A-AC---CT--T-A----T---T
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5021338 37 +   6462685 at-tgaG---CACATTG-ACA-GATGTGAA----T--GAC--A-AC---CT--T-A----T---T
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3467414 37 -   3747815 ac-TGAG---CACATTG-ACA-GATGTGAA----T--GAC--A-AC---CT--T-A----T---T
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        12659 37 +     66751 AC-TGAG---CACATTG-ACA-GATGTGAA----T--GAC--A-AC---CT--T-A----T---T
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             5907 34 -      8794 GC-TGAA---CA----G-ACAAGCTGTGAA----A--GAC-----A-AGAT--T-A----G---C
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 I 8
s Nasalis_larvatus.k141_153429                               9784 37 +     48152 TC-TGAA---CACATTGG-TA-GATGTAAA----T--GACA----AA--GT--T-A----T---G
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4485752 28 -  14209539 gc-tgaa---cACACTG-ACA-GATGTGAA----T--GAC-------------------------
i Neomonachus_schauinslandi.NINY01007774.1              C 0 I 8
s Neophocaena_asiaeorientalis.KZ688543.1                  3951869 35 -   4490290 GC-TGAA---CACATTG-ACA-GATATGAA----T--GAC-----A---GT--T-A----T---C
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Nomascus_annamensis.k141_220265                            1681 37 +      1763 TC-TGAA---CACGTTGG-CA-GATGTAAA----T--GACA----AA--GT--T-A----T---A
i Nomascus_annamensis.k141_220265                       C 0 C 0
s Nomascus_concolor.k141_226614                              2471 37 -      5092 TC-TGAA---CACATTGG-CA-GATGTAAA----T--GACA----AA--GT--T-A----T---A
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_1032971                             45 37 -      1918 TC-TGAA---CACATTGG-CA-GATGTAAA----T--GACA----AA--GT--T-A----T---A
i Nomascus_gabriellae.k141_1032971                      C 0 C 0
s Nomascus_siki_b.tarseq_80                             26223 37 -  18771707 tt-tgtt---tgcgttgg-ca-gatgtaaa----t--gACA----AA--GT--T-A----T---A
i Nomascus_siki_b.tarseq_80                         I 547 C 0
s Nomascus_siki_a.k141_1035055                                  783 37 -      3602 TC-TGAA---CACATTGG-CA-GATGTAAA----T--GACA----AA--GT--T-A----T---A
i Nomascus_siki_a.k141_1035055                            I 161 I 27
s Nyctereutes_procyonoides.CAJHUB010000786.1                31785 28 +   3668941 gc-tgaa---CACAATG-ATA-AAGATAAA----T--GAC-------------------------
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 I 208
s Nycticebus_bengalensis.LG16                            65567859 36 -  95554990 GT-TATA---CACATTG--CA-GATGTGCA----T--GACC----AA--GT--T-A----T---T
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            4585 36 +      6470 GT-TATA---CACATTG--CA-GATGTGCA----T--GACC----AA--GT--T-A----T---T
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65670194 36 +  89412551 GT-TATA---CACATTG--CA-GATGTGCA----T--GACC----AA--GT--T-A----T---T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Octodon_degus.JH651621.1                                3686739 37 +  10294119 GC-TGAA---TACATTG-ACA-GATTTGAA----A--AAC--A-AG---CT--T-A----T---T
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             680419 28 -   3126709 gC-TGAA---CACACTG-ACA-GATGTGAA----T--GAC-------------------------
i Odobenus_rosmarus.KB229369.1                          C 0 I 8
s Odocoileus_virginianus.KZ101650.1                       1080537 35 +   1425656 gC-CAAA---CACATCA-GCA-GATATAAA----T--GAC-----A---GT--T-A----T---T
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         37825 35 +     78940 gC-CAAA---CACATTG-ACA-GATATAAA----T--GAC-----A---GT--T-A----T---T
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Orcinus_orca.KB316965.1                                 7225554 35 -   7562323 GC-TGAA---CACATTG-ACA-GATATGAA----T--GAC-----A---GT--T-A----T---C
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              60814 37 -     66828 GC-TGAC---CATATTG-ATG-ATTGTGAA----T--GAC-----A-ATGT--T-A----T---C
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141877209 28 + 163896628 CC-TGAA---CACACAA-ACC-AATGTAAa----t--ggt-------------------------
i Oryctolagus_cuniculus.CM000803.1                      C 0 I 9
s Otocyon_megalotis.JAEUCK010005121.1                      309069 28 -    505867 gc-tgAA---CACAATG-ATA-AAGATAAA----T--GAC-------------------------
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 I 219
s Otolemur_crassicaudatus.k141_505435                        1486 36 -     53940 GT-CATA---CACATTG--CA-GATGTGCA----T--GACC----AA--GT--T-A----T---T
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18009467 36 -  38779656 GT-CATA---CACATTG--CA-GATGTGCA----T--GACC----AA--GT--T-A----T---T
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134078130 35 - 275406953 GC-CAAA---CACATTG-ACA-GATATAAA----A--GAC-----A---GT--G-A----T---T
i Ovis_aries.CM001582.2                                 C 0 I 9
s Ovis_canadensis.OviCan_scaffold_6251                      79345 35 +    140051 GC-CAAA---CACATTG-ACA-GATATAAA----A--GAC-----A---GT--G-A----T---T
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 I 9
s Panthera_onca.PanOnc_flattened_line_1615                  35202 23 +    295523 GC-TGAA---CATACTG-ACA-GATTTGA------------------------------------
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3638952 23 +  18214204 cc-tGAA---CATACTG-ACA-GATTTGA------------------------------------
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5028628 23 -   6340057 gc-tgaa---cATACTG-ACA-GATTTGA------------------------------------
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1066980 31 -   1292953 GC-CAAA---TACATTG-ACA-GATATAAA----A--GAC-----A---GT--------------
i Pantholops_hodgsonii.KE114631.1                       C 0 I 12
s Papio_anubis.CM001492.2                               188157539 37 - 188283584 TC-TGAA---CACATTGG-TA-GATGTAAA----T--GACA----AA--GT--T-A----T---A
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                               631 37 +     25005 TC-TGAA---CACATTGG-TA-GATGTAAA----T--GACA----AA--GT--T-A----T---A
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47514916 37 +  47705337 TC-TGAA---CACATTGG-TA-GATGTAAA----T--GACA----AA--GT--T-A----T---A
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 68906 37 -    104429 TC-TGAA---CACATTGG-TA-GATGTAAA----T--GACA----AA--GT--T-A----T---A
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    7435 37 +     14967 TC-TGAA---CACATTGG-TA-GATGTAAA----T--GACA----AA--GT--T-A----T---A
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 3300 37 -      7628 TC-TGAA---CACATTGG-TA-GATGTAAA----T--GACA----AA--GT--T-A----T---A
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    116662 25 -    135482 GC-TGAA----ATACTG-AC---ATGTGAA----T--GAC-------------------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 I 9
s Perodicticus_ibeanus.k141_117958                           6171 36 -     23713 GT-CATA---CACATTG--CA-GATGTGCG----T--GACC----AA--GC--T-A----T---T
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            25485 36 -     27972 GT-CATA---CACATTG--CA-GATGTGCA----T--GACC----AA--GC--T-A----T---T
i Perodicticus_potto.k141_713187                        C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    14471 37 -     36578 AC-TGAA---TCCACTG-ACA-GATTTGAA----T--AAC--A-AA---AT--T-A----T---T
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            122158 35 -    122454 GC-TGAA---CACACTG-ACA-GATATGAA----T--GAC-----A---GT--T-A----T---C
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 C 0
s Piliocolobus_badius.k141_1987485                           3313 37 -      5908 TC-TGAA---CACATTGG-TA-GATGTAAA----T--GACA----AA--GT--T-A----T---G
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       3931 37 -     17985 TC-TGAA---CACATTGG-TA-GATGTAAA----T--GACA----AA--GT--T-A----T---G
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            3298 37 +      7694 TC-TGAA---CACATTGG-TA-GATGTAAA----T--GACA----AA--GT--T-A----T---G
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26741782 37 +  26888534 TC-TGAA---CACATTGG-TA-GATGTAAA----T--GACA----AA--GT--T-A----T---G
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pithecia_albicans.k141_991845                             44719 38 -     61926 TC-TGAA---CGTATTGA-CA-GATGTTGA----T--GACA----AAA-GT--T-A----T---A
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        26104 36 +     78826 TC-TGAA---CGTATTGA-CA-GATGTTGA----T--GACA----A---GT--T-A----T---A
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                             10150 38 -     15800 TC-TGAA---CGTATTGA-CA-GATGTTGA----T--GACA----AAA-GT--T-A----T---A
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        13349 38 -     16101 TC-TGAA---CGTATTGA-CA-GATGTTGA----T--GACA----AAA-GT--T-A----T---A
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          6578 38 +      9673 TC-TGAA---CGTATTGA-CA-GATGTTGA----T--GACA----AAA-GT--T-A----T---A
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13475578 38 -  19735023 TC-TGAA---CGTATTGA-CA-GATGTTGA----T--GACA----AAA-GT--T-A----T---A
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           14481 38 -     31692 TC-TGAA---TGTATTGA-CA-GATGTTGA----T--GACA----AAA-GT--T-A----T---A
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           6473 37 +     21690 GC-TGAA---CACACTG-ACA-GATATGAA----T--GAC--A-AA---GT--T-A----T---C
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       23817 38 +     44506 TC-TCAA---CACATTGA-CA-GATGTGGA----T--GACA----AAA-GT--T-A----T---A
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        24029 38 +     67491 TC-TCAA---CACATTGA-CA-GATGTGGA----T--GACA----AAA-GT--T-A----T---A
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      14269 38 -     98129 TC-TCAA---CACATTGA-CA-GATGTGGA----T--GACA----AAA-GT--T-A----T---A
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     23869 38 +    147771 TC-TCAA---CACATTGA-CA-GATGTGGA----T--GACA----AAA-GT--T-A----T---A
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                          505 38 -     43940 TC-TCAA---CACATTGA-CA-GATGTGGA----T--GACA----AAA-GT--T-A----T---A
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          4588 38 -     55515 TC-TCAA---CACATTGA-CA-GATGTGGA----T--GACA----AAA-GT--T-A----T---A
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         23942 38 +    152463 TC-TCAA---CACATTGA-CA-GATGTGGA----T--GACA----AAA-GT--T-A----T---A
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       1659 38 -    119457 TC-TCAA---CACATTGA-CA-GATGTGGA----T--GACA----AAA-GT--T-A----T---A
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         13665 38 +    134592 TC-TCAA---CACATTGA-CA-GATGTGGA----T--GACA----AAA-GT--T-A----T---A
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          24252 38 -     75465 TC-TCAA---CACATTGA-CA-GATGTGGA----T--GACA----AAA-GT--T-A----T---A
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              188417 37 -    373494 TC-TGAA---CACATTGG-CA-GATGTAAA----T--GACA----AA--GT--T-A----T---A
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19809064 37 +  19899266 TC-TGAA---CACATTGG-CA-GATGTAAA----T--GACA----AA--GT--T-A----T---A
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               7063 37 -     15069 TC-TGAA---CACATTGG-TA-GATGTAAA----T--GACA----AA--GT--T-A----T---G
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              7178 37 +     14865 TC-TGAA---CACATTGG-TA-GATGTAAA----T--GACA----AA--GT--T-A----T---G
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6849336 36 +  12164890 AT-TGAA---CACATTA--CA-GATATGCA----T--GACC----AA--AT--T-A----T---T
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     19503 36 -     30946 nn-nnnn---nnnnnnn--nn-nnnnnnnn----n--nnnn----nn--nn--n-n----n---n
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         4410 34 +     11805 ---CAAA---CACATTA--CA-GATGTTCA----T--GACC----AA--GT--T-A----T---T
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           43756 36 +     52369 AC-CAAA---CACATTA--CA-GATGTTCA----T--GACC----AA--GT--T-A----T---T
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         36143 36 -     44753 AC-CAAA---CACATTA--CA-GATGTTCA----T--GACC----AA--GT--T-A----T---T
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            18066 36 +     27322 AC-CAAA---CACATTA--CA-GATGTTCA----T--GACC----AA--GT--T-A----T---T
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       17700 36 -     53241 AC-CAAA---CACATTA--CA-GATGTTCA----T--GACC----AA--GT--T-A----T---T
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         39964 36 -     48185 AC-CAAA---CACATTA--CA-GATGTTCA----T--GACC----AA--GT--T-A----T---T
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Pteronotus_parnellii.KE867983.1                            4943 35 -     27784 GTTTGAG---TA-ATTG-ACA-GATGTGAA----T--GAC-----A-AAGT--T-A---------
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        247551 28 -    344369 GC-TGAA---CACAACA-ACA-GATGTGAA----T--GAC-------------------------
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 I 8
s Pteropus_alecto.KB031157.1                             13246830 37 -  17261082 gc-TAAA---CACATTG-ACA-TATTTGAA----T--GAC-----A---A---A-G----TTATT
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             604781 37 -   3946241 gc-TAAA---CACATTG-ACA-TATTTGAA----T--GAC-----A---A---A-G----TTATT
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131535223 23 - 161321710 gc-tgaa---cATACTG-ACA-gatttga------------------------------------
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             31166 37 +     56732 TC-TGAA---CACATTGG-TA-GATGTAAA----T--GACA----AA--GT--T-A----T---G
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6807660 37 +   6970761 TC-TGAA---CACATTGG-TA-GATGTAAA----T--GACA----AA--GT--T-A----T---G
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             7053 37 +     18040 TC-TGAA---CACATTGG-TA-GATGTAAA----T--GACA----AA--GT--T-A----T---G
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                16649 35 +     68503 AC-CAAA---CATATCA-ACA-GATATAAA----T--GAC-----A---GT--T-A----T---T
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1788719 37 +   2252614 GC-TAAA---TACATTG-ACA-AATATGAA----T--GAC-----A---A---A-GTTATT----
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                            1450 37 -     17045 TC-TGAA---CACATTGG-TA-GATGTAAA----T--GACA----AA--GT--T-A----T---G
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206378938 37 - 206558726 TC-TGAA---CACATTGG-TA-GATGTAAA----T--GACA----AA--GT--T-A----T---G
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44857840 37 -  45163003 TC-TGAA---CACATTGG-TA-GATGTAAA----T--GACA----AA--GT--T-A----T---G
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                20170 37 +    109198 GA-TAAA---CATATTG-ATA-GATTTGAA----T--GAC-----A---A---A-G----TTATT
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       8805 35 +     12214 GC-CAAA---CACATTG-ACA-GATATAAA----A--GAC-----A---GT--G-A----T---T
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 I 9
s Saimiri_boliviensis.NW_024100938.1                     15673667 37 -  43202129 TC-TGAA---CACATGGA-CA--ATGTGGA----T--GACA----AAA-GT--T-A----T---A
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        5580 37 +     34089 TC-TGAA---CACATGGA-CA--ATGTGGA----T--GACA----AAA-GT--T-A----T---A
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              5522 37 -     60842 TC-TGAA---CACATGGA-CA--ATGTGGA----T--GACA----AAA-GT--T-A----T---A
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              5615 37 +     67014 TC-TGAA---CACATGGA-CA--ATGTGGA----T--GACA----AAA-GT--T-A----T---A
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              5593 37 +     60816 TC-TGAA---CACATGGA-CA--ATGTGGA----T--GACA----AAA-GT--T-A----T---A
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 5530 37 -     76454 TC-TGAA---CACATGGA-CA--ATGTGGA----T--GACA----AAA-GT--T-A----T---A
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17342266 38 -  30362882 TC-TGAA---CACATGGA-CA-GATGTGGT----T--GACA----AAA-GT--T-A----T---A
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         21627 38 -     62485 TC-TGAA---CACATGGA-CA-GATGTGGT----T--GACA----AAA-GT--T-A----T---A
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   37559  8 -    114521 ------------------------tacgga----t--g---------------------------
i Scalopus_aquaticus.ScaAqu_scaffold_9300               I 22 I 12
s Semnopithecus_entellus.k141_1572367                        4670 37 +     15331 TC-TGAA---CACATTGG-TA-GATGTAAA----T--GACA----AA--GT--T-A----T---G
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      10045 37 +     20762 TC-TGAA---CACATTGG-TA-GATGTAAA----T--GACA----AA--GT--T-A----T---G
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         120051 37 +    130994 TC-TGAA---CACATTGG-TA-GATGTAAA----T--GACA----AA--GT--T-A----T---G
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           38829 37 +     46263 TC-TGAA---CACATTGG-TA-GATGTAAA----T--GACA----AA--GT--T-A----T---G
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     31974 37 +     42640 TC-TGAA---CACATTGG-TA-GATGTAAA----T--GACA----AA--GT--T-A----T---G
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        14996 24 +     30600 TC-TGAA---CACATTGG-TA-GATGTAAA-----------------------------------
i Semnopithecus_vetulus.k141_1143185                    C 0 I 12
s Solenodon_paradoxus.SolPar_flattened_line_1012            19736 26 +    739146 GC-TAAA---TCCATTG-TCA-GATATGAA----T--G---------------------------
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 I 7
s Sorex_araneus.JH798170.1                               17767318 26 -  27805282 gc-tgAA---TCCATTG-ACA-GAGGGGAA----T--A---------------------------
i Sorex_araneus.JH798170.1                              C 0 I 9
s Spermophilus_dauricus.KZ294190.1                        2240611 28 +   2842873 GC-TGAA---CACATTA-ATG-GATATGAA----T--GAT-------------------------
i Spermophilus_dauricus.KZ294190.1                      C 0 I 9
s Spilogale_gracilis.SpiGra_flattened_line_905             235925 28 -    276980 GC-TGAA---CACACTG-ACA-GATGTGAA----T--GAC-------------------------
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 I 8
s Suricata_suricatta.SurSur_flattened_line_20339            28439 28 +     62062 GC-TGAA---CATACTG-ATA-GATGTGAA----T--GAC-------------------------
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 I 9
s Sus_scrofa.CM000824.4                                 189272949 37 + 218635234 GC-TGAA---TATACTG-ACA-TAGATGAA----T--GAC--A-AA---GT--T-A----T---T
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        16170 37 -  13920577 TC-TGAA---CACATTGG-CA-GATGTAAA----T--GACA----AA--GT--T-A----T---A
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                1137 37 +     20549 GC-TGAG---CACACTG-ACA-GATGTCAG----T--GAT--A-AA---GT--T-A----T---T
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               15569 38 +     45698 GC-TGAA---CACATTG-ACAAGCTGTGAA----A--GAA-----A-AGAT--T-A----G---C
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 I 8
s Tapirus_indicus.TapInd_scaffold_176                      807990 37 +   1148477 GC-TGAA---CACACTG-ACA-GATGTGAA----T--GAA--A-AA---GT--T-A----T---G
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  58702 37 +     99546 GC-TGAA---CACACTG-ACA-GATGTGAA----T--GAA--A-AA---GT--T-A----T---G
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194009067 37 - 194193292 TC-TGAA---CACATTGG-TA-GATGTAAA----T--GACA----AA--GT--T-A----T---A
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             39831 37 -     47444 GC-CGAA---TCCACTG-ACA-GACTTGAA----T--AAC--A-AA---AT--C-A----T---T
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  6374 37 +      6782 GC-TGAA---CACATTG-ACA-ATGGTGAA----T--GAC-----A-AGGT--T-A----T---C
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  136922 36 -    259118 GCTTGAG---TAGGTTG-ACA-AATATGAA----T--AAC-----A-AAGT--T-A---------
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        28155 37 +     38948 TC-TGAA---CACACTGG-TA-GATGTAAA----T--GACA----AA--GT--T-A----T---G
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   21877 37 -     32910 TC-TGAA---CACATTGG-TA-GATGTAAA----T--GACA----AA--GT--T-A----T---G
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      3289 37 -     12939 TC-TGAA---CACACTGG-TA-GATGTAAA----T--GACA----AA--GT--T-A----T---G
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       3207 37 -     14244 TC-TGAA---CACATTGG-TA-GATGTAAA----T--GACA----AA--GT--T-A----T---G
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           44604 37 -     54611 TC-TGAA---CACATTGG-TA-GATGTAAA----T--GACA----AA--GT--T-A----T---G
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        2401 37 -     11566 TC-TGAA---CACATTGG-TA-GATGTAAA----T--GACA----AA--GT--T-A----T---G
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     4584 37 -     15592 TC-TGAA---CACATTGG-TA-GATGTAAA----T--GACA----AA--GT--T-A----T---G
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          3236 37 +     14371 TC-TGAA---CACATTGG-TA-GATGTAAA----T--GACA----AA--GT--T-A----T---G
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   1523 37 +     12481 TC-TGAA---CACATTGG-TA-GATGTAAA----T--GACA----AA--GT--T-A----T---G
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        1397 37 -     24393 TC-TGAA---CACATTGG-TA-GATGTAAA----T--GACA----AA--GT--T-A----T---G
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       6647 37 -     28054 TC-TGAA---CACATTGG-TA-GATGTAAA----T--GACA----AA--GT--T-A----T---G
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44661431 37 -  44834318 TC-TGAA---CACATTGG-TA-GATGTAAA----T--GACA----AA--GT--T-A----T---G
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       3747 37 +     13828 TC-TGAA---CACATTGG-TA-GATGTAAA----T--GACA----AA--GT--T-A----T---G
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   5995 35 +     90398 GC-TAAA---CACGCTG-ACA-GATATAAA----T--GAC-----A---GT--T-A----T---T
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16086210 40 +  31416278 GC-TGACCACCATATTG-ATG-GTTGTGAA----T--GAC-----A-ACAT--T-a----t---t
i Trichechus_manatus.JH594618.1                         C 0 I 489
s Tupaia_chinensis.KB320831.1                             2794256 20 -   3938065 GT-TAAA---CACACTA-ACA-GATA---------------------------------------
i Tupaia_chinensis.KB320831.1                           C 0 I 9
s Tupaia_tana.TupTan_flattened_line_68454                    6337 20 +     13056 GT-TAAA---CACACTA-ACA-GATA---------------------------------------
i Tupaia_tana.TupTan_flattened_line_68454               C 0 I 13
s Tursiops_truncatus.MRVK01000923.1                      69314270 26 -  96451834 GC-TGAA---CACATTG-ACA-GATATGAA----T--G---------------------------
i Tursiops_truncatus.MRVK01000923.1                     C 0 I 9
s Uropsilus_gracilis.UroGra_scaffold_69449                   8129 24 +     10241 ga-cgaa-----cattg-ACA-GATATGAA----T--A---------------------------
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 I 9
s Ursus_maritimus.KK498671.1                              6515670 28 +  28682327 GC-CAAA---CACACGG-ACA-GATGTGAA----T--GAC-------------------------
i Ursus_maritimus.KK498671.1                            C 0 I 8
s Varecia_rubra.k141_432109                                  5977 36 -     20643 AT-TGAA---CACATTA--CA-GATGTGCA----T--GACC----AA--GT--T-A----T---T
i Varecia_rubra.k141_432109                             C 0 I 11
s Varecia_variegata.k141_775891                             25512 36 -     33872 AT-TGAA---CACATTA--CA-GATGTGCA----T--GACC----AA--GT--T-A----T---T
i Varecia_variegata.k141_775891                         C 0 I 11
s Vicugna_pacos.KN269600.1                                1525497 30 -   2331223 gg-TGAT---CACATTG-ATA-GATGTGAA----T--GAC-----A---G---------------
i Vicugna_pacos.KN269600.1                              C 0 I 2
s Vulpes_lagopus.VulLag_flattened_line_2045                139165 28 -    281493 GC-TGAA---CACAATG-ATA-AAGATAAA----T--GAC-------------------------
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 I 223
s Xerus_inauris.XerIna_scaffold_7898                       127729 35 -    134049 GC-TAAA---CACATTG-ATG-GATATGAA----T--GAC-----A-A--T--T-A----T---T
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        215146 28 -    227762 GC-TGAA---CACACTG-ACA-GATGTGAA----T--GAC-------------------------
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 I 8
s Zapus_hudsonius.ZapHud_scaffold_64392                     16697 33 -     20485 GC-TGAG---CATGTTG-AC---ATGTGAA----C--AGC-----A---AG--A-T----T---T
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           7769 37 -      8775 GC-TGAA---CACATTG-ACA-GATATGAA----T--GAC--A-AA---GT--T-A----T---C
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 I 4
e Ochotona_princeps.JH802095.1                            4996729 2205 -  23139505 I
e Perognathus_longimembris.PerPac_flattened_line_19359        892 695 +     49596 I
e Procavia_capensis.ProCapCap_scaffold_149274                2467 1156 -      9567 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Megaderma_lyra.MegLyr_scaffold_3562                       64783 239 -    234502 I
e Heterohyrax_brucei.HetBruBak_scaffold_25354               61360 1157 +     73687 I
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1008 325 -      5782 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19677 266 -    119109 I
e Microtus_ochrogaster.CM001673.1                        22820377 122 -  98408828 I
e Tarsius_wallacei.k141_48636                               60532 3805 +     65473 I
e Tarsius_lariang.k141_609102                               27216 3812 +     42269 I
e Sigmodon_hispidus.SigHis_scaffold_11332                  100998 122 -    120886 I
e Rattus_norvegicus.chr11                                13915860 1475 +  90463843 I
e Psammomys_obesus.NESX01026517.1                           36232 122 +     77221 I
e Peromyscus_maniculatus.KI615518.1                       4951147 122 -   8017169 I
e Onychomys_torridus.OnyTor_scaffold_12578                  37821 122 +     62360 I
e Ondatra_zibethicus.OndZib_scaffold_6821                  125630 120 +    145789 I
e Nannospalax_galili.KL201303.1                            119159  6 +    362372 I
e Mus_spretus.CM004110.1                                 74333152 260 +  97876770 I
e Mus_pahari.LT608305.1                                  67556620 256 +  89017189 I
e Mus_musculus.chr16                                     75490417 259 +  98207768 I
e Mus_caroli.LT608236.1                                  70767340 259 +  92629107 I
e Mesocricetus_auratus.KB708139.1                         1047652 119 -  26018355 I
e Meriones_unguiculatus.MerUng_scaffold_52233               13942 122 +     15977 I
e Ellobius_talpinus.LOJH01090055.1                           7187 122 -      7838 I
e Ellobius_lutescens.LOEQ01003611.1                        240062 122 -    369425 I
e Dolichotis_patagonum.DolPat_scaffold_14102                36772 276 -     73477 I
e Dasyprocta_punctata.DasPun_flattened_line_634             59553 276 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                18462 277 +     26546 I
e Cricetulus_griseus.LT883672.1                          53029979 121 +  72327488 I
e Cricetomys_gambianus.CriGam_scaffold_949                 279183 147 -    399297 I
e Colobus_angolensis.KN985967.1                          10887472 517 +  10971483 I
e Cephalopachus_bancanus.k141_702587                         8788 3391 +     21754 I
e Cavia_tschudii.CavTsc_scaffold_488                       177453 271 +    436027 I
e Cavia_porcellus.DS562889.1                             15799262 290 -  24440124 I
e Cavia_aperea.AVPZ01000278.1                            15787326 288 -  24422027 I
e Carlito_syrichta.NW_007248099.1                          309764 3411 +    345090 I
e Acomys_cahirinus.AcoCah_scaffold_1625                    113481 121 -    189883 I
e Pan_paniscus.CM003386.1                               127575888 480 - 205426864 I
e Pan_troglodytes.CM009241.2                            120153042 480 - 196562556 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               14860 23 +    209709 TT-CA--CACA-----AT-CAGT----TTTTCTTGC
s Acinonyx_jubatus.LLWD01000356.1                         2034886 11 +   3721120 ---------------------GT----TTTTCTTTA
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10658219 26 +  23371972 GT-CA--CATA-CTC-AT-TCgt----ttttctttc
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 8 C 0
s Ailurus_fulgens.LNAC01000003.1                          7095570 26 -  16596857 GT-CA--CATA-Ctc-at-tagt----ttttctttc
i Ailurus_fulgens.LNAC01000003.1                        I 7 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   17816 28 -     22067 TT-CATATGCA-ATC-AT-CATT----TGTTCTTGC
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   2586 26 -     60446 TT-CA--CACA-ATC-AT-CAAT----TTTTCTTGC
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         3303 26 -     29318 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         2239 26 +     38766 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          3197 26 -     80423 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            11171 26 -     18050 TT-CA--CGCA-ATC-AT-CAGT----TGTTCTTGC
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_1710068                                887 26 +      1555 TT-CA--CGCA-ATC-AT-CAGT----TGTTCTTGC
i Alouatta_caraya.k141_1710068                          C 0 C 0
s Alouatta_discolor.k141_811576                             11844 26 -     21359 TT-CA--CGCA-ATC-AT-CAGT----TGTTCTTGC
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                1467 26 +      2129 TT-CA--CGCA-ATC-AT-CAGT----TGTTCTTGC
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_2177643                           851 26 -      1868 TT-CA--CGCA-ATC-AT-CAGT----TGTTCTTGC
i Alouatta_macconnelli.k141_2177643                     C 0 C 0
s Alouatta_nigerrima.k141_3537692                             900 26 +      1660 TT-CA--CGCA-ATC-AT-CAGT----TGTTCTTGC
i Alouatta_nigerrima.k141_3537692                       C 0 C 0
s Alouatta_palliata.k141_2764429                              813 26 -      1480 TT-CA--CGCA-ATC-AT-CAGT----TGTTCTTGA
i Alouatta_palliata.k141_2764429                        C 0 C 0
s Alouatta_puruensis.k141_131505                              107 26 +      4855 TT-CA--CGCA-ATC-AT-CAGT----TGTTCTTGC
i Alouatta_puruensis.k141_131505                        C 0 C 0
s Alouatta_seniculus.k141_1531728                            1028 26 -      1692 TT-CA--CGCA-ATC-AT-CAGT----TGTTCTTGC
i Alouatta_seniculus.k141_1531728                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3521023 10 +   4113121 ----------------------T----TGTTCTTGC
i Ammotragus_lervia.NIVO01013474.1                      I 9 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      391413 25 -    631301 -T-CA--CATA-ATC-AT-CTGT----AGTTCTTGC
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            31595 23 +     33004 TT-CA--CACA---A--T-CAGT----TGTTCTTGC
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 63518 26 +     78111 TT-CA--CACA-ATC-AT-CAGT----TGTTCTTGC
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            6460 26 +     22701 TT-CA--CACA-ATC-AT-CAGT----TGTTCTTGC
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5750417 26 +   9889416 TT-CA--CACA-ATC-AT-CAGT----TGTTCTTGC
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             7006 26 -    104377 TT-CA--CACA-ATC-AT-CAGT----TGTTCTTGC
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               7008 26 +     23246 TT-CA--CACA-ATC-AT-CAGT----TGTTCTTGC
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     4558 13 +      5067 -------------------TACT----TGATCTTAT
i Aplodontia_rufa.AprRuf_scaffold_156013                I 10 C 0
s Arctocebus_calabarensis.k141_587554                        1800 26 +      9265 TT-CA--CACA-ATC-AT-AAGT----TGTTCTTAT
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 9830 25 -     29036 -T-CA--CATA-ATC-AT-CAGT----AGTTCTTGT
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9540282 26 +  39197703 TT-CA--CGCA-ATC-AT-CAGT----TGTTCTTGC
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             61553 26 +     85812 TT-CA--CGCA-ATC-AT-CAGT----TGTTCTTGC
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                12566 26 +     89302 TT-CA--CGCA-ATC-AT-CAGT----TGTTCTTGC
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             17069 26 -     58268 TT-CA--CGCA-ATC-AT-CAGT----TGTTCTTGC
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             65061 26 +    119057 TT-CA--CGCA-ATC-AT-CAGT----TGTTCTTGC
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               7032 26 -     25888 TT-CA--CGCA-ATC-AT-CAGT----TGTTCTTGC
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 7536 26 -     16375 TT-CA--CACA-AAC-AT-ACAC----TGTTCTTAT
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               1152 26 +      6337 TT-CA--CACA-AAC-AT-ACAC----TGTTCTTAT
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26381074 23 +  51448160 TT-CA--CACA---A--T-CAGT----TGTTCTTGC
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        6246 23 -     13118 TT-CA--CACA---A--T-CAGT----TGTTCTTGC
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   44129 10 -     72089 ----------------------T----TGTTCCTGC
i Beatragus_hunteri.BeaHun_scaffold_21644               I 9 C 0
s Bison_bison.KN264915.1                                  6560738 23 +   6870073 TT-CA--CACG---A--G-CAGT----TGTTCTTGC
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138140853 23 - 161108492 TT-CA--CACG---A--T-CAGT----TGTTCTTGC
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     573394 23 -    998990 TT-CA--CATG---A--T-CAAT----TGTTCTTGC
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136296586 23 - 158972876 TT-CA--CACG---A--T-CAGT----TGTTCTTGC
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1233668 23 -   1914593 TT-CA--CACA---A--T-CAGT----TGTTCTTGC
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               114919 26 -    171031 TT-CA--CGCA-GTC-AT-CAGT----TGTTCTTGC
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 13948 26 +    125063 TT-CA--CGCA-GTC-AT-CAGT----TGTTCTTGC
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                15991 26 -    216513 TT-CA--CGCA-GTC-AT-CAGT----TGTTCTTGC
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        8534 26 -    134917 TT-CA--CGCA-GTC-AT-CAGT----TGTTCTTGC
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3220425 23 -   8989139 TT-CA--CACA-ATT-AT-CCA-------TTCTTGC
i Camelus_bactrianus.KN276303.1                         I 2 C 0
s Camelus_dromedarius.KN271192.1                           398126 23 -  15254737 TT-CA--CACA-ATT-AT-CCA-------TTCTTGC
i Camelus_dromedarius.KN271192.1                        I 2 C 0
s Camelus_ferus.KB016973.1                                2973862 23 +   6889770 TT-CA--CACA-ATT-AT-CCA-------TTCTTGC
i Camelus_ferus.KB016973.1                              I 2 C 0
s CanFam4.chr31                                          11520579 31 +  39901454 TTTCA--CATA-CTC-AT-TAGTGTGCTTTTCTTTC
i CanFam4.chr31                                         I 223 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   15604 31 +     87036 TTTCA--CATA-CTC-AT-TAGTGTGCTTTTCTTTC
i Canis_lupus_VD.CanFam_VD_scaffold_16982               I 223 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11267248 31 -  35597290 TTTCA--CATA-CTC-AT-TAGTGTGCTTTTCTTTC
i Canis_lupus_dingo.QKWQ01001993.1                      I 225 C 0
s Canis_lupus_familiaris.chr31                           11089781 31 +  39895921 TTTCA--CATA-CTC-AT-TAGTGTGCTTTTCTTTC
i Canis_lupus_familiaris.chr31                          I 224 C 0
s Canis_lupus_orion.HG994411.1                           16456794 31 -  44759192 TTTCA--CATA-CTC-AT-TAGTGTGCTTTTCTTTC
i Canis_lupus_orion.HG994411.1                          I 223 C 0
s Capra_aegagrus.CM003214.1                              21326098 10 + 157394656 ----------------------T----TGTTCTTGC
i Capra_aegagrus.CM003214.1                             I 9 C 0
s Capra_hircus.CM004562.1                               135707326 10 - 157403528 ----------------------T----TGTTCTTGC
i Capra_hircus.CM004562.1                               I 9 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               60620 25 +     67245 -T-CA--CATA-ATC-AT-CAGT----AGTTCTTGT
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   31984 25 +     33760 TT-CA--CACA-ATC-AT-CAT-----TGTTTTTAC
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   159755 26 -    276539 TT-CC--CCAA-ACC-AT-CAGT----TGTTCTTGC
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18891759 26 -  29618158 TT-CA--CACA-ATC-AT-CAGT----TGTTCTTGC
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 9303 26 -     26817 TT-CA--CACA-ATC-AT-CAGT----TGTTCTTGC
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                13546 26 +     25043 TT-CA--CACA-ATC-AT-CAGT----TGTTCTTGC
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4364788 26 +   7569818 CT-CA--CACA-GTC-AT-CAGT----TTTTCTTGC
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         4545 26 -      9338 CT-CA--CACA-GTC-AT-CAGT----TTTTCTTGC
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6556533 26 +   6739814 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      28007 26 +     60454 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          3214 26 -     21101 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         60524 26 -    107033 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        3403 26 -     17608 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                           562 26 +     45019 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                            646 26 +     15177 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          3446 26 +     16677 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           25615 26 +     35983 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11992144 26 +  12117833 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46478901 26 +  46592721 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      42456 26 -     45581 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       3458 26 +     35577 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        3231 26 -     25661 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        3211 26 -     17744 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        22816 26 +     37128 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           3673 25 -      6963 TT-CA--TACA-ATC-AC-CAAT----TGTTG-TGC
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           59811 26 -     68416 TT-CA--CACA-AAC-AT-AAGC----TGTTCTTAT
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            8859 26 +     13308 TT-CA--CACA-AAC-AT-AAGC----TGTTCTTAT
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             6576 26 -     18223 TT-CA--CGCA-CTC-AT-CAGT----TGTTCTTGC
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             23594 26 +     25473 TT-CA--CGCA-CTC-AT-CAGT----TGTTCTTGC
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           42634 26 +     57117 TT-CA--CGCA-CTC-AT-CAGT----TGTTCTTGC
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          47313 26 +     54541 TT-CA--CGCA-CTC-AT-CAGT----TGTTCTTGC
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15962603 26 +  43084221 TT-TA--Caca-att-at-aatt----tattcttGC
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         72120 26 +    196370 TT-CA--CGCA-GTC-AT-CAGT----TGTTCTTGC
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          16300 26 +     40510 TT-CA--CGCA-GTC-AT-CAGT----TGTTCTTGC
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15140813 26 -  15256731 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      35422 26 -     53260 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101145981 26 + 101219884 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                17388 26 -     21363 TT-CA--AACA-ATC-AC-CAAT----TGCTCTTGC
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           762693 26 +    964067 TT-CA--AACA-ATC-AC-CAAT----TGCTCTTGC
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10887989 10 +  10971483 ----------------------c----cctaNNNNN
i Colobus_angolensis.KN985967.1                         I 517 C 0
s Colobus_guereza.LG08                                  147665901 26 + 156195979 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            17884 26 +     23629 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60620445 23 +  78930452 CC-CC--CATT-TTC-AT-CAGT----TCTTTC---
i Condylura_cristata.JH655880.1                         I 12 C 0
s Crocidura_indochinensis.CroInd_scaffold_848148              431 26 +      1327 TT-CT--CACT-GTG-AT-GAAT----TGTTCTTAG
i Crocidura_indochinensis.CroInd_scaffold_848148        I 9 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            52923 26 -     70449 GT-CA--CATA-CTC-AT-TTGT----TTTTCTTTA
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 9 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  209332 26 -    956709 TT-CA--CACA-ATC-AC-AATT----TGTCCTTTC
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 31952 26 -     67205 TT-TA--CACA-ATC-AC-AGTT----TGTTTTTGC
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          184519 22 -   6883506 TT-CA--CACA-ATC-AC-CAAT----T---G-TGC
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16845682 26 +  31942871 TT-CA--CAGA-AGC-AT-AAGT----TGTTCTTAT
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80037702 23 -  96802777 TT-CA--CACA---A--T-CAGT----TGTTCTTGC
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18699906 25 -  18957592 -T-CA--CGTA-ATC-AT-CAAT----AGTtcttgt
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 323440 26 +    993696 CT-CA--CACA-GTC-AT-TAGT----TTTTCTTAC
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   4092 26 +    151128 CT-CA--CACA-GTC-AT-CAGT----TTTTCTTAC
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   157802 26 +    228994 TT-TA--CACAACT--AT-AATT----TGTTCTTGC
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3657256 25 +   4240102 -T-TG--TGCA-ATC-AT-CATT----TGTTCTTGC
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_289041                  186 26 -       724 TT-TA--TGCA-ATC-AT-CATT----TGTTCTTGC
i Dipodomys_stephensi.DipSte_scaffold_289041            N 0 I 64
s Echinops_telfairi.JH980316.1                           22999925  6 -  44670279 ct-tt--tg---------------------------
i Echinops_telfairi.JH980316.1                          C 0 I 2
s Eidolon_helvum.KE772537.1                                 13147 26 +     24177 tt-ca--aaca-atC-AT-CAGT----TGTTTTTGC
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1492354 23 +   1727528 TT-CA--CACA---A--T-CAGT----TGTTCTTGC
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7829615 22 +  15467074 TT-CA--TA----T--AC-AAAT----TTCACTAGT
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85873093 26 +  99434291 GT-CA--CATG-CTC-AT-TAGT----TTTTCGTTC
i Enhydra_lutris.KZ291749.1                             I 8 C 0
s Eptesicus_fuscus.JH977687.1                             4707844 26 +   6522550 TT-CA--CACA-ATG-AT-CAAT----GGTTCCTGC
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5854088 24 -   7175178 TC-CA--CACA-ATC-AT-CAGT----CTTTCTT--
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13352588 24 +  41866177 TC-CA--CACA-ATC-AT-CAGT----CTTTCTT--
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          14078 24 +     92910 TC-CA--CACA-ATC-AT-CAGT----CTTTCTT--
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erythrocebus_patas.Contig8                             48777992 26 -  48907691 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          315914 23 +    330699 TT-CA--CACA---A--T-CAGT----TGTTCTTGC
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             62370 23 +     89355 TT-CA--CACA---A--T-CAGT----TGTTCTTGC
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              5857 26 +     13586 TT-CA--CACA-AAC-AT-AAGC----TGTTCTTAT
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               5789 26 -      6809 TT-CA--CACA-AAC-AT-AAGC----TGTTCTTAT
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            12263 26 +     36558 TT-CA--CACA-AAC-AT-AAGC----TGTTCTTAT
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             8584 26 +     60246 TT-CA--CACA-AAC-AT-AAGC----TGTTCTTCT
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                12062 26 +    109717 TT-CA--CACA-AAC-AT-AAGC----TGTTCTTAT
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                   47 26 -     19505 TT-CA--CACA-AAC-AT-AAGC----TGTTCTTAT
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                16722 26 +     27497 TT-CA--CACA-AAC-AT-AAGC----TGTTCTTAT
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           19178 26 +     26808 TT-CA--CACA-AAC-AT-AAGC----TGTTCTTAT
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                33916 26 +     46535 TT-CA--CACA-AAC-AT-AAGC----TGTTCTTAT
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              16642 26 -     29447 TT-CA--CACA-AAC-AT-AAGC----TGTTCTTAT
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129893858 11 - 159252932 ---------------------gt----ttttcttta
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129280942 11 - 158578461 ---------------------GT----TTTTCTTTA
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 22082 11 +     52776 ---------------------GT----TTTTCTTTA
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13892265 26 -  19261668 TT-CA--CACA-ATC-AT-AATC----TGTTATTTG
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     211707 26 -    847004 TT-CA--CACA-ATC-AT-AAGT----TGTTCTTAT
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           14081 26 -     43889 TT-CA--CACA-ATC-AT-AAGT----TGTTCTTAT
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          11147 26 +     27357 TT-CA--CACA-ATC-AT-AAGT----TGTTCTTAT
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               157189 26 +    324696 TT-CA--CACA-GTC-AT-CAGT----CATTCTTGC
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    182130 23 -    189561 TT-CA--CACG---A--T-CCGT----TGTTCTCAC
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           14654 26 -     18683 TT-CA--CACA-ATC-AT-CATT----TGTTCTTAT
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               6570 26 -     14630 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119653670 26 - 195582420 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   78073 26 +    118900 TT-CA--CACA-ATC-AC-CATT----TGTTTTTAC
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         2643 26 +     10286 TT-CA--CACA-AAC-AT-AAGC----TGTTCTTAT
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             1123 26 -     11661 TT-CA--CACA-AAC-AT-AAGC----TGTTCTTAT
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             6449 26 +     56096 TT-CA--CACA-AAC-AT-AAGC----TGTTCTTAT
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        29698 26 -     42470 TT-CA--CACA-AAT-AT-AAGC----TGTTCTTAT
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        46326 26 -     54384 TT-CA--CACA-AAC-AT-AAGC----TGTTCTTAT
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              18120 26 +     53719 GT-CA--CATA-CTC-AT-TTGT----TTTTCTTTA
i Helogale_parvula.HelPar_flattened_line_22962          I 9 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                28383 10 -     91191 ----------------------T----TGTTCTTGC
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 9 C 0
s Heterocephalus_glaber.JH602058.1                        2551983 26 +  31725842 TT-CA--CACA-Atc-at-aatt----tgttcttta
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              148008 23 +    277961 TT-CA--CACA---A--T-CAGT----TGTTCCTGC
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      279302 26 -    477199 TT-CA--Caca-atc-at-cagt----ttttcttgC
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_345408               303 26 -       919 TT-CA--CACA-ATC-AT-CTGT----TTTTCTTGC
i Hipposideros_galeritus.HipGal_scaffold_345408         C 0 C 0
s Hoolock_leuconedys.ctg79                                      6257 26 -   7690867 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 18191 24 -     67322 GT-CA--CATA-CTC-AT-TTGT----TT--ATTTA
i Hyaena_hyaena.HyaHya_flattened_line_20729             I 9 C 0
s Hylobates_abbotti.k141_164775                              1038 26 -      2073 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Hylobates_abbotti.k141_164775                         C 0 C 0
s Hylobates_agilis.k141_1362131                                49 26 +      1075 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Hylobates_agilis.k141_1362131                         C 0 C 0
s Hylobates_klossii.k141_183401                               593 26 -      1272 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Hylobates_klossii.k141_183401                         I 37 C 0
s Hylobates_pileatus_b.ContigUN                                 14625946 26 -  25970782 TT-CA--CACA-ATC-CT-CAGT----TTTTCTTGC
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_950183                              641 26 +      2027 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Hylobates_muelleri.k141_950183                        C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             35106 26 -     60944 TT-CA--CACA-ATC-CT-CAGT----TTTTCTTGC
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     7051 26 +     22540 TT-CA--CACA-ATC-AT-AATT----TGTTCTTAC
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7126732 26 +  13083262 TT-TG--GACA-ATC-AT-CATT----TATTCTTAT
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_5141390                                   1169 26 -      3181 TT-CA--CACA-AAC-AT-ACAC----TGTTCTTAT
i Indri_indri.k141_5141390                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               9908 23 +     17520 TT-CA--CACA---A--T-CAGT----TGTTCTTGC
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8566829 28 +  11848649 TT-CATATGCA-ATC-AT-CATT----TGTTCTTGC
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               24510 23 +     37189 TT-CA--CACA---A--T-CGGT----TGTTCTTGC
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          51151 26 -    147782 TT-CA--CGCA-ATC-AT-CAGT----TGTTCTTGC
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    4515 26 +     26176 TG-CT--CACA-ATG-AT-CAAT----GATTCCTGC
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258408005 26 - 285822530 TT-CA--CACA-AAC-AT-AAGC----TGTTCTTAT
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        24755 26 +     39228 TT-CA--CATA-AAC-AT-AAGC----TGTTCTTAC
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            54141 26 +     63517 TT-CA--CATA-AAC-AT-AAGC----TGTTCTTAC
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        79403 26 +    116806 TT-CA--CATA-AAC-AT-AAGC----TGTTCTTAC
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     32394 26 -     33031 TT-CA--CATA-AAC-AT-AAGC----TGTTCTTAC
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3086871 26 -   3498232 GT-CA--CATA-CTT-AT-TAGT----TTTCCTTTC
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    14209 26 +     22452 TT-CA--TACA-ATC-AT-TAGT----CATTTGGGT
i Lepus_americanus.LepAme_scaffold_62849                I 9 C 0
s Lipotes_vexillifer.KE558548.1                            136864 23 +   3060487 TT-CA--CACA---A--T-CAGT----TGTTCTTGC
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19249610 26 +  19376315 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           11441 26 +     84689 TT-CA--CACA-ATC-AT-AAGT----TGTTCTTAT
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3779190 26 +   6799190 TT-CA--CACA-ATC-AT-AAGT----TGTTCTTAT
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20595725 22 -  62548349 TT-CA--TG---C---AC-CAAG----TGTTCTTGC
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11089237 31 +  39895028 TTTCA--CATA-CTC-AT-TAGTGTGCTTTTCTTTC
i Lycaon_pictus.CM007556.1                              I 224 C 0
s Macaca_arctoides.k141_2201161                             21367 26 +     74745 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12707827 26 +  12821369 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                 405 26 -     26467 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           48272 26 +     63263 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                  382 26 -     26361 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 3559 26 -      7381 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  46797 26 -     79256 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196036899 26 + 196197964 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11447065 26 +  11645122 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   5751 26 -     46448 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                3417 26 -     13212 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 17094 26 -     55006 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43842200 26 +  43892939 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               18381 26 -     24607 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               5748 26 -     27140 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                701863 26 +    802869 TT-CA--AACA-ATC-AT-CAGT----TGTTTTTGC
i Macroglossus_sobrinus.MacSob_scaffold_879             I 1 C 0
s Mandrillus_leucophaeus.scaffold125                     43438782 26 -  43563597 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4451596 26 -   4543643 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            146960 12 +    252755 --------------------AGT----TTTTCTTGC
i Manis_javanica.JSZB01003966.1                         I 2 C 0
s Manis_pentadactyla.KN017078.1                             37104 12 +     58827 --------------------AGT----TTTTCTTGC
i Manis_pentadactyla.KN017078.1                         I 2 C 0
s Marmota_marmota.CZRN01000005.1                         36874652 26 +  64221397 TT-TG--GATA-ATC-AT-CATT----TATTCTTAT
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             1905 26 -     87323 GT-CA--CGTG-TTC-AT-TAGT----TTTTCTTGC
i Mellivora_capensis.MelCap_flattened_line_15433        I 8 C 0
s Mesoplodon_bidens.MesBid_scaffold_475714                     11 23 +       551 TT-CA--CACA---A--T-CAGT----TGTTCTTGC
i Mesoplodon_bidens.MesBid_scaffold_475714              N 0 C 0
s Microcebus_murinus.CM007691.1                          16511027 26 +  47401472 TT-CA--CACA-AAC-AT-AAGC----TGTTCTTAC
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  39235  6 -     48017 ------------------------------tgatgc
i Microgale_talazaci.MicTal_scaffold_34660              I 119 I 2
s Micronycteris_hirsuta.MicHir_scaffold_37978               23810 17 -     32043 -T-CA--CATA-ATC-AT-CAGT----A--------
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8211874 26 +  10048721 TT-CA--CACA-ATT-AT-CAGT----AGTTCTTGC
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            36363 26 +     45743 TT-CA--CACA-ATT-AT-CAGT----AGTTCTTGC
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         3343 26 +     29742 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        12398 26 -    104932 GT-CA--CATA-CTT-AT-TAGT----TTTCCTTTC
i Mirounga_angustirostris.MirAng_flattened_line_8852    I 8 C 0
s Mirza_zaza.k141_226143                                     6416 26 +      8497 TT-CA--TACA-AAC-AT-AAGC----TGTTCTTAT
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 147292 23 +    154973 TT-CA--CACA---A--T-CAGT----TGTTCTTGC
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                162332 25 +    265003 -T-CA--CATA-ATC-AT-CAGT----AGTTCTTGC
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  2385 23 -     19904 TT-CA--CACG---A--T-CAGT----TGTTCTTGC
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  145817 26 -    168139 GT-CA--CATA-CTT-AT-TTGT----TTTTCTTTA
i Mungos_mungo.MunMun_flattened_line_8729               I 9 C 0
s Murina_feae.MurFea_scaffold_2254                          23329 26 -    100666 TT-CA--CACA-ATC-AT-CAAT----AGTTACTGC
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             13163 26 +     98495 TT-CA--TGTA-ATC-AT-CACT----TGTTCTTAT
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 6 C 0
s Mustela_putorius.JH417978.1                             4425276 26 -  28371801 GT-CA--CATG-CTC-AT-TAGT----TTTTCGTTC
i Mustela_putorius.JH417978.1                           I 8 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     91280 24 -    117718 TT-TA--CACA-ATC-AT-AAT------GTTTTTAC
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               969949 26 +   8389877 TT-CA--TACA-ATC-AT-CAAT----AGTTCCtgc
i Myotis_brandtii.KE161952.1                            C 0 I 234
s Myotis_davidii.KB114863.1                               5021375 26 +   6462685 TT-CA--TACA-ATC-AT-CAAT----AGTTCCtgc
i Myotis_davidii.KB114863.1                             C 0 I 233
s Myotis_lucifugus.GL429887.1                             3467451 26 -   3747815 TT-CA--TACA-ATC-AT-CAAT----AGTTCCtgc
i Myotis_lucifugus.GL429887.1                           C 0 I 235
s Myotis_myotis.MyoMyo_scaffold_6123                        12696 26 +     66751 TT-CA--TACA-ATC-AT-CAAT----AGTTCCTGC
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 I 233
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             5949 11 -      8794 ---------------------AT----TGCTCTTGC
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        I 8 C 0
s Nasalis_larvatus.k141_153429                               9821 26 +     48152 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4485788 26 -  14209539 GT-CA--CATA-CTT-AT-TAGT----TTTCCTTTC
i Neomonachus_schauinslandi.NINY01007774.1              I 8 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3951904 23 -   4490290 TT-CA--CACA---A--T-CAGT----TGTTCTTGC
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Nomascus_annamensis.k141_220265                            1718 26 +      1763 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Nomascus_annamensis.k141_220265                       C 0 C 0
s Nomascus_concolor.k141_226614                              2508 26 -      5092 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_1032971                             82 26 -      1918 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Nomascus_gabriellae.k141_1032971                      C 0 C 0
s Nomascus_siki_b.tarseq_80                             26260 26 -  18771707 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  3930 26 +      4512 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Nomascus_siki_a.k141_595747                             I 37 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                32021 31 +   3668941 TTTCG--CATA-CTC-AT-TAGTGTGCTTTTCTTTC
i Nyctereutes_procyonoides.CAJHUB010000786.1            I 208 C 0
s Nycticebus_bengalensis.LG16                            65567895 26 -  95554990 TT-CA--CACA-ATC-AT-AAGT----TGTTCTTAT
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            4621 26 +      6470 TT-CA--CACA-ATC-AT-AAGT----TGTTCTTAT
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65670230 26 +  89412551 TT-CA--CACA-ATC-AT-AAGC----TTTTCTTAT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Octodon_degus.JH651621.1                                3686776 26 +  10294119 TT-TA--CACA-AGT-AT-AATT----TGTTTTTGC
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             680455 26 -   3126709 GT-CA--CATA-CTC-AT-TAGT----TTTCCTTTC
i Odobenus_rosmarus.KB229369.1                          I 8 C 0
s Odocoileus_virginianus.KZ101650.1                       1080572 23 +   1425656 TT-CA--CACA---A--T-CAGT----TGTTCTTAC
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         37860 23 +     78940 TT-CA--CACA---A--T-CAGT----TGTTCTCAC
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Orcinus_orca.KB316965.1                                 7225589 23 -   7562323 TT-CA--CACC---A--T-CAGT----TGTTCTTGC
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              60851 21 -     66828 TT-CC--CA---C---AA--AAA----TGTTCTTGC
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141877246 26 + 163896628 tt-ca--tacg-ATC-AT-TAGT----CATTTGGGT
i Oryctolagus_cuniculus.CM000803.1                      I 9 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      309316 31 -    505867 TTTCG--CATA-CTC-AT-TAGTGTGCTTTTCTTTC
i Otocyon_megalotis.JAEUCK010005121.1                   I 219 C 0
s Otolemur_crassicaudatus.k141_505435                        1522 26 -     53940 TT-CA--CACA-ATC-AT-AAGT----TGTTCTTAT
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18009503 26 -  38779656 TT-CA--CACA-ATC-AT-AAGT----TGTTCTTAT
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134078174 10 - 275406953 ----------------------T----TGTTCTTGC
i Ovis_aries.CM001582.2                                 I 9 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      79389 10 +    140051 ----------------------T----TGTTCTTGC
i Ovis_canadensis.OviCan_scaffold_6251                  I 9 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  35225 11 +    295523 ---------------------GT----TTTTCTTTA
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3638975 11 +  18214204 ---------------------GT----TTTTCGTTA
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5028651 11 -   6340057 ---------------------GT----TTTTCTTTA
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1067023 10 -   1292953 ----------------------T----TGTTCTTGC
i Pantholops_hodgsonii.KE114631.1                       I 12 C 0
s Papio_anubis.CM001492.2                               188157576 26 - 188283584 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                               668 26 +     25005 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47514953 26 +  47705337 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 68943 26 -    104429 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    7472 26 +     14967 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 3337 26 -      7628 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    116696 25 -    135482 TT-CA--CATA-CTC-AT-TTGT----TTTT-TCTA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 I 9 C 0
s Perodicticus_ibeanus.k141_117958                           6207 26 -     23713 TT-CA--CACA-ATC-AT-AAGT----TGTTCTTAT
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            25521 26 -     27972 TT-CA--CACA-ATC-AT-AAGT----TGTTCTTAT
i Perodicticus_potto.k141_713187                        C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    14508 26 -     36578 TT-CA--CACA-ATC-AC-AATT----TGTTCTTGC
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_11948            122193 21 -    122454 TT-CA--CACA---A--t-cagt----tgttctt--
i Phocoena_phocoena.PhoPho_flattened_line_11948         C 0 N 0
s Piliocolobus_badius.k141_1987485                           3350 26 -      5908 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       3968 26 -     17985 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            3335 26 +      7694 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26741819 26 +  26888534 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pithecia_albicans.k141_991845                             44757 26 -     61926 TT-CA--CGCA-ATC-AT-CAGT----TGTTCTTGC
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        26140 26 +     78826 TT-CA--CGCA-ATC-AT-CAGT----TGTTCTTGC
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                             10188 26 -     15800 TT-CA--CGCA-ATC-AT-CAGT----TGTTCTTGC
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        13387 26 -     16101 TT-CA--CGCA-ATC-AT-CAGT----TGTTCTTGC
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          6616 26 +      9673 TT-CA--CGCA-ATC-AT-CAGT----TGTTCTTGC
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13475616 26 -  19735023 TT-CA--CGCA-ATC-AT-CAGT----TGTTCTTGC
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           14519 26 -     31692 TT-CA--CGCA-ATC-AT-CAGT----TGTTCTTGC
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           6510 23 +     21690 TT-CA--CACA---A--T-CAGT----TGTTCTTGC
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       23855 26 +     44506 TT-CA--TGCA-CTC-AT-CAGT----TGTTCTTGC
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        24067 26 +     67491 TT-CA--TGCA-CTC-AT-CAGT----TGTTCTTGC
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      14307 26 -     98129 TT-CA--TGCA-CTC-AT-CAGT----TGTTCTTGC
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     23907 26 +    147771 TT-CA--TGCA-CTC-AT-CAGT----TGTTCTTGC
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                          543 26 -     43940 TT-CA--TGCA-CTC-AT-CAGT----TGTTCTTGC
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          4626 26 -     55515 TT-CA--TGCA-CTC-AT-CAGT----TGTTCTTGC
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         23980 26 +    152463 TT-CA--TGCA-CTC-AT-CAGT----TGTTCTTGC
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       1697 26 -    119457 TT-CA--TGCA-CTC-AT-CAGT----TGTTCTTGC
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         13703 26 +    134592 TT-CA--TGCA-CTC-AT-CAGT----TGTTCTTGC
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          24290 26 -     75465 TT-CA--TGCA-CTC-AT-CAGT----TGTTCTTGC
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              188454 26 -    373494 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19809101 26 +  19899266 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               7100 26 -     15069 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              7215 26 +     14865 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6849372 26 +  12164890 TT-CA--CACA-AAC-AT-AAGC----TGTTCTTAT
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     19539 26 -     30946 nn-nn--nnnn-nnn-nn-nnnn----nnnnnnnnn
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         4444 26 +     11805 TT-CA--CACA-AAC-AT-ACGC----TGTTCTTAT
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           43792 26 +     52369 TT-CC--CACA-AAC-AT-ACGC----TGTTCTTAT
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         36179 26 -     44753 TT-CC--CACA-AAC-AT-ACGC----TGTTCTTAT
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            18102 26 +     27322 TT-CC--CACA-AAC-AT-ACGC----TGTTCTTAT
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       17736 26 -     53241 TT-CA--CACA-AAC-AT-ACGC----TGTTCTTAT
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         40000 26 -     48185 TT-CA--CACA-AAC-AT-ATGC----TGTTCTTAT
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Pteronotus_parnellii.KE867983.1                            4978 25 -     27784 -T-CA--CATA-ATC-AT-CAGT----ATTTCTTGC
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        247587 26 -    344369 GT-CA--CATG-CTC-AT-TTGT----TTTTCATTC
i Pteronura_brasiliensis.PteBra_flattened_line_1343     I 8 C 0
s Pteropus_alecto.KB031157.1                             13246867 26 -  17261082 TT-CA--AACA-ATC-AT-CAGT----TGTTTTTGC
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             604818 26 -   3946241 TT-CA--AACA-ATC-AT-CAGT----TGTTTTTGC
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131535246 11 - 161321710 ---------------------gt----ttttcttta
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             31203 26 +     56732 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6807697 26 +   6970761 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             7090 26 +     18040 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                16684 23 +     68503 TT-CA--CACA---A--T-CAGT----TGTTCTTAC
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1788756 26 +   2252614 TT-CA--CACA-ATC-AT-CAGT----TTTTATTGC
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                            1487 26 -     17045 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206378975 26 - 206558726 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44857877 26 -  45163003 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                20207 25 +    109198 TT-CA--AACA-ATC-AT-CAGT----TATT-TTGC
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       8849 10 +     12214 ----------------------T----TGTTCTTGC
i Saiga_tatarica.SaiTat_scaffold_82192                  I 9 C 0
s Saimiri_boliviensis.NW_024100938.1                     15673704 26 -  43202129 GT-CA--CACA-ATC-AT-CAGT----TGTTCTTGC
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        5617 26 +     34089 GT-CA--CACA-ATC-AT-CAGT----TGTTCTTGC
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              5559 26 -     60842 GT-CA--CACA-ATC-AT-CAGT----TGTTCTTGC
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              5652 26 +     67014 GT-CA--CACA-ATC-AT-CAGT----TGTTCTTGC
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              5630 26 +     60816 GT-CA--CACA-ATC-AT-CAGT----TGTTCTTGC
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 5567 26 -     76454 GT-CA--CACA-ATC-AT-CAGT----TGGTCTTGC
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17342304 26 -  30362882 TT-CA--CACA-ATC-AT-CAGT----TGTTCTTGC
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         21665 26 -     62485 TT-CA--CACA-ATC-AT-CAGT----TGTTCTTGC
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   37579 23 -    114521 CC-TC--CACA-GTC-AT-CACT----TCTTCC---
i Scalopus_aquaticus.ScaAqu_scaffold_9300               I 12 C 0
s Semnopithecus_entellus.k141_1572367                        4707 26 +     15331 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      10082 26 +     20762 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         120088 26 +    130994 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           38866 26 +     46263 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     32011 26 +     42640 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        15032 26 +     30600 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Semnopithecus_vetulus.k141_1143185                    I 12 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            19769 26 +    739146 TT-CA--CAAA-ATC-AT-CACT----TGTTCTTAA
i Solenodon_paradoxus.SolPar_flattened_line_1012        I 7 I 14
s Sorex_araneus.JH798170.1                               17767353 18 -  27805282 TT-CT--CACA-ATC-AT-TAAT--------C----
i Sorex_araneus.JH798170.1                              I 9 C 0
s Spermophilus_dauricus.KZ294190.1                        2240648 26 +   2842873 TT-TG--GACA-ATC-at-catt----tattcttat
i Spermophilus_dauricus.KZ294190.1                      I 9 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             235961 26 -    276980 GT-CA--CGTA-CTC-AT-TAGT----TTTTCTTTC
i Spilogale_gracilis.SpiGra_flattened_line_905          I 8 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            28476 26 +     62062 GT-CA--CATA-CTC-AT-TTGT----TTTTCTTTA
i Suricata_suricatta.SurSur_flattened_line_20339        I 9 C 0
s Sus_scrofa.CM000824.4                                 189272986 26 + 218635234 TT-TC--CAAA-ACC-AT-CAGT----TGTTCTTGC
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        16207 25 -  13920577 -T-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                1174 26 +     20549 TC-CG--CACA-GTC-AT-CAGT----AGTTCTTGC
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               15615 11 +     45698 ---------------------AT----TGCTCTTGC
i Tamandua_tetradactyla.TamTet_scaffold_26877           I 8 C 0
s Tapirus_indicus.TapInd_scaffold_176                      808027 27 +   1148477 TT-CA--CAAT--TCTATGCAGT----TTCTCTTGC
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  58739 27 +     99546 TT-CA--CAAT--TCTATGCAGT----TTCTCTTGC
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194009104 26 - 194193292 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             39868 26 -     47444 TT-CA--CACC-ATC-AC-AATT----TGTTCTTAC
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  6411 25 +      6782 TT-CA--CATA-ATC-AC-CAAT----TGCTG-TGC
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  136958 25 -    259118 -T-CA--CATA-ATC-AT-TAGT----AGTTCTTGC
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        28192 26 +     38948 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   21914 26 -     32910 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      3326 26 -     12939 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       3244 26 -     14244 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           44641 26 -     54611 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        2438 26 -     11566 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     4621 26 -     15592 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          3273 26 +     14371 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   1560 26 +     12481 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        1434 26 -     24393 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       6684 26 -     28054 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44661468 26 -  44834318 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       3784 26 +     13828 TT-CA--CACA-ATC-AT-CAGT----TTTTCTTGC
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   6030 23 +     90398 TT-CA--TACA---A--T-CATT----TGTTCTTGC
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16086739 22 +  31416278 tt-ca--ca---C---AC-CAAT----TGTTCTTGC
i Trichechus_manatus.JH594618.1                         I 489 C 0
s Tupaia_chinensis.KB320831.1                             2794285 26 -   3938065 TT-CA--TGCA-ATC-AC-CAGT----TATTCCTGA
i Tupaia_chinensis.KB320831.1                           I 9 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    6370 26 +     13056 TT-CA--TGCA-ATC-AC-CAGT----TATTCCTGA
i Tupaia_tana.TupTan_flattened_line_68454               I 13 C 0
s Tursiops_truncatus.MRVK01000923.1                      69314305 23 -  96451834 TT-CA--CACC---A--T-CAGT----TGTTCTTGC
i Tursiops_truncatus.MRVK01000923.1                     I 9 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   8162 23 +     10241 CC-CA--CAGA-GCC-AT-GAGC----TCTTCC---
i Uropsilus_gracilis.UroGra_scaffold_69449              I 9 C 0
s Ursus_maritimus.KK498671.1                              6515706 26 +  28682327 GT-CA--CATG-CTC-AT-TAGT----GTTTCTTTC
i Ursus_maritimus.KK498671.1                            I 8 C 0
s Varecia_rubra.k141_432109                                  6024 13 -     20643 -------------------AAAC----TGTTCTTAC
i Varecia_rubra.k141_432109                             I 11 C 0
s Varecia_variegata.k141_775891                             25559 13 -     33872 -------------------AAAC----TGTTCTTAC
i Varecia_variegata.k141_775891                         I 11 C 0
s Vicugna_pacos.KN269600.1                                1525529 23 -   2331223 TT-CA--CACA-ATT-AT-CCA-------TTCTTGC
i Vicugna_pacos.KN269600.1                              I 2 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                139416 31 -    281493 TTTCA--CATA-CTC-AT-TAGTGTGCTTTTCTTTC
i Vulpes_lagopus.VulLag_flattened_line_2045             I 223 C 0
s Xerus_inauris.XerIna_scaffold_7898                       127764 26 -    134049 TT-TA--GATA-ATC-AT-CATT----TATCCTTAC
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        215182 26 -    227762 GT-CA--CATA-CTC-AT-TAGT----TTTCTTTTC
i Zalophus_californianus.ZalCal_flattened_line_4097     I 8 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     16730 21 -     20485 CT-CATACACA-ATC-AT-CATT----TG-------
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           7810 10 -      8775 ----------------------A----TGTTCTTGC
i Ziphius_cavirostris.ZipCav_flattened_line_127025      I 4 C 0
e Ochotona_princeps.JH802095.1                            4996729 2205 -  23139505 I
e Perognathus_longimembris.PerPac_flattened_line_19359        892 695 +     49596 I
e Procavia_capensis.ProCapCap_scaffold_149274                2467 1156 -      9567 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Megaderma_lyra.MegLyr_scaffold_3562                       64783 239 -    234502 I
e Heterohyrax_brucei.HetBruBak_scaffold_25354               61360 1157 +     73687 I
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1008 325 -      5782 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19677 266 -    119109 I
e Microtus_ochrogaster.CM001673.1                        22820377 122 -  98408828 I
e Tarsius_wallacei.k141_48636                               60532 3805 +     65473 I
e Tarsius_lariang.k141_609102                               27216 3812 +     42269 I
e Sigmodon_hispidus.SigHis_scaffold_11332                  100998 122 -    120886 I
e Rattus_norvegicus.chr11                                13915860 1475 +  90463843 I
e Psammomys_obesus.NESX01026517.1                           36232 122 +     77221 I
e Peromyscus_maniculatus.KI615518.1                       4951147 122 -   8017169 I
e Onychomys_torridus.OnyTor_scaffold_12578                  37821 122 +     62360 I
e Ondatra_zibethicus.OndZib_scaffold_6821                  125630 120 +    145789 I
e Nannospalax_galili.KL201303.1                            119159  6 +    362372 I
e Mus_spretus.CM004110.1                                 74333152 260 +  97876770 I
e Mus_pahari.LT608305.1                                  67556620 256 +  89017189 I
e Mus_musculus.chr16                                     75490417 259 +  98207768 I
e Mus_caroli.LT608236.1                                  70767340 259 +  92629107 I
e Mesocricetus_auratus.KB708139.1                         1047652 119 -  26018355 I
e Meriones_unguiculatus.MerUng_scaffold_52233               13942 122 +     15977 I
e Ellobius_talpinus.LOJH01090055.1                           7187 122 -      7838 I
e Ellobius_lutescens.LOEQ01003611.1                        240062 122 -    369425 I
e Dolichotis_patagonum.DolPat_scaffold_14102                36772 276 -     73477 I
e Dasyprocta_punctata.DasPun_flattened_line_634             59553 276 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                18462 277 +     26546 I
e Cricetulus_griseus.LT883672.1                          53029979 121 +  72327488 I
e Cricetomys_gambianus.CriGam_scaffold_949                 279183 147 -    399297 I
e Cephalopachus_bancanus.k141_702587                         8788 3391 +     21754 I
e Cavia_tschudii.CavTsc_scaffold_488                       177453 271 +    436027 I
e Cavia_porcellus.DS562889.1                             15799262 290 -  24440124 I
e Cavia_aperea.AVPZ01000278.1                            15787326 288 -  24422027 I
e Carlito_syrichta.NW_007248099.1                          309764 3411 +    345090 I
e Acomys_cahirinus.AcoCah_scaffold_1625                    113481 121 -    189883 I
e Pan_paniscus.CM003386.1                               127575888 480 - 205426864 I
e Pan_troglodytes.CM009241.2                            120153042 480 - 196562556 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               14883 1 +    209709 A
s Acinonyx_jubatus.LLWD01000356.1                         2034897 1 +   3721120 A
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10658245 1 +  23371972 a
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7095596 1 -  16596857 a
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   17844 1 -     22067 A
i Allactaga_bullata.AllBul_scaffold_70162               C 0 I 410
s Allenopithecus_nigroviridis.k141_2469532                   2612 1 -     60446 A
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         3329 1 -     29318 A
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         2265 1 +     38766 A
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          3223 1 -     80423 A
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            11197 1 -     18050 G
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_1710068                                913 1 +      1555 G
i Alouatta_caraya.k141_1710068                          C 0 C 0
s Alouatta_discolor.k141_811576                             11870 1 -     21359 G
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                1493 1 +      2129 A
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_2177643                           877 1 -      1868 A
i Alouatta_macconnelli.k141_2177643                     C 0 C 0
s Alouatta_nigerrima.k141_3537692                             926 1 +      1660 A
i Alouatta_nigerrima.k141_3537692                       C 0 C 0
s Alouatta_palliata.k141_2764429                              839 1 -      1480 G
i Alouatta_palliata.k141_2764429                        C 0 C 0
s Alouatta_puruensis.k141_131505                              133 1 +      4855 A
i Alouatta_puruensis.k141_131505                        C 0 C 0
s Alouatta_seniculus.k141_1531728                            1054 1 -      1692 A
i Alouatta_seniculus.k141_1531728                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3521033 1 +   4113121 A
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      391438 1 -    631301 A
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            31618 1 +     33004 A
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 63544 1 +     78111 A
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            6486 1 +     22701 A
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5750443 1 +   9889416 A
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             7032 1 -    104377 A
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               7034 1 +     23246 A
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_156013                     4571 1 +      5067 A
i Aplodontia_rufa.AprRuf_scaffold_156013                C 0 N 0
s Arctocebus_calabarensis.k141_587554                        1826 1 +      9265 A
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 9855 1 -     29036 G
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9540308 1 +  39197703 A
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             61579 1 +     85812 A
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                12592 1 +     89302 A
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             17095 1 -     58268 A
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             65087 1 +    119057 A
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               7058 1 -     25888 A
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 7562 1 -     16375 A
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               1178 1 +      6337 A
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26381097 1 +  51448160 A
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        6269 1 -     13118 A
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   44139 1 -     72089 A
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6560761 1 +   6870073 A
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138140876 1 - 161108492 A
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     573417 1 -    998990 A
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136296609 1 - 158972876 A
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1233691 1 -   1914593 A
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               114945 1 -    171031 A
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 13974 1 +    125063 A
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                16017 1 -    216513 A
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        8560 1 -    134917 A
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3220448 1 -   8989139 A
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           398149 1 -  15254737 A
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2973885 1 +   6889770 A
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11520610 1 +  39901454 A
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   15635 1 +     87036 A
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11267279 1 -  35597290 A
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11089812 1 +  39895921 A
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16456825 1 -  44759192 A
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21326108 1 + 157394656 A
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135707336 1 - 157403528 A
i Capra_hircus.CM004562.1                               C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               60645 1 +     67245 G
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   32009 1 +     33760 A
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   159781 1 -    276539 A
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18891785 1 -  29618158 A
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 9329 1 -     26817 A
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                13572 1 +     25043 A
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4364814 1 +   7569818 G
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         4571 1 -      9338 G
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6556559 1 +   6739814 A
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      28033 1 +     60454 A
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          3240 1 -     21101 A
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         60550 1 -    107033 A
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        3429 1 -     17608 A
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                           588 1 +     45019 A
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                            672 1 +     15177 A
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          3472 1 +     16677 A
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           25641 1 +     35983 A
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11992170 1 +  12117833 A
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46478927 1 +  46592721 A
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      42482 1 -     45581 A
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       3484 1 +     35577 A
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        3257 1 -     25661 A
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        3237 1 -     17744 A
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        22842 1 +     37128 A
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           3698 1 -      6963 A
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           59837 1 -     68416 A
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            8885 1 +     13308 A
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             6602 1 -     18223 A
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             23620 1 +     25473 A
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           42660 1 +     57117 A
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          47339 1 +     54541 A
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15962629 1 +  43084221 A
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         72146 1 +    196370 A
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          16326 1 +     40510 A
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15140839 1 -  15256731 A
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      35448 1 -     53260 A
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101146007 1 + 101219884 A
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                17414 1 -     21363 A
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           762719 1 +    964067 A
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10887999 1 +  10971483 N
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147665927 1 + 156195979 A
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            17910 1 +     23629 A
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60620468 1 +  78930452 A
i Condylura_cristata.JH655880.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_848148              457 1 +      1327 A
i Crocidura_indochinensis.CroInd_scaffold_848148        C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            52949 1 -     70449 A
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  209358 1 -    956709 A
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 31978 1 -     67205 A
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          184541 1 -   6883506 A
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16845708 1 +  31942871 A
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80037725 1 -  96802777 A
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18699931 1 -  18957592 g
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 323466 1 +    993696 A
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   4118 1 +    151128 G
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   157828 1 +    228994 A
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3657281 1 +   4240102 A
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_285155                  209 1 -       736 A
i Dipodomys_stephensi.DipSte_scaffold_285155            n 64 C 0
s Eidolon_helvum.KE772537.1                                 13173 1 +     24177 a
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1492377 1 +   1727528 A
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 I 43
s Elephantulus_edwardii.JH947210.1                        7829637 1 +  15467074 T
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85873119 1 +  99434291 A
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Erythrocebus_patas.Contig8                             48778018 1 -  48907691 A
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          315937 1 +    330699 A
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             62393 1 +     89355 A
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              5883 1 +     13586 A
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               5815 1 -      6809 A
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            12289 1 +     36558 A
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             8610 1 +     60246 A
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                12088 1 +    109717 A
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                   73 1 -     19505 A
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                16748 1 +     27497 A
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           19204 1 +     26808 A
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                33942 1 +     46535 A
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              16668 1 -     29447 A
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129893869 1 - 159252932 a
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129280953 1 - 158578461 A
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 22093 1 +     52776 A
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13892291 1 -  19261668 A
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     211733 1 -    847004 A
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           14107 1 -     43889 A
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          11173 1 +     27357 A
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               157215 1 +    324696 A
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    182153 1 -    189561 A
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           14680 1 -     18683 A
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               6596 1 -     14630 A
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119653696 1 - 195582420 A
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   78099 1 +    118900 A
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         2669 1 +     10286 A
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             1149 1 -     11661 A
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             6475 1 +     56096 A
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        29724 1 -     42470 A
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        46352 1 -     54384 A
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              18146 1 +     53719 A
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                28393 1 -     91191 A
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2552009 1 +  31725842 a
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              148031 1 +    277961 A
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      279328 1 -    477199 A
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_345408               329 1 -       919 A
i Hipposideros_galeritus.HipGal_scaffold_345408         C 0 I 42
s Hoolock_leuconedys.ctg79                                      6283 1 -   7690867 A
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 18215 1 -     67322 A
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hylobates_abbotti.k141_164775                              1064 1 -      2073 A
i Hylobates_abbotti.k141_164775                         C 0 C 0
s Hylobates_agilis.k141_1362131                                75 1 +      1075 A
i Hylobates_agilis.k141_1362131                         C 0 I 42
s Hylobates_klossii.k141_183401                               619 1 -      1272 A
i Hylobates_klossii.k141_183401                         C 0 I 42
s Hylobates_pileatus_b.ContigUN                                 14625972 1 -  25970782 A
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_950183                              667 1 +      2027 A
i Hylobates_muelleri.k141_950183                        C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             35132 1 -     60944 A
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     7077 1 +     22540 A
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7126758 1 +  13083262 A
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_5141390                                   1195 1 -      3181 A
i Indri_indri.k141_5141390                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               9931 1 +     17520 A
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8566857 1 +  11848649 A
i Jaculus_jaculus.JH725517.1                            C 0 I 10229
s Kogia_breviceps.KogBre_flattened_line_35920               24533 1 +     37189 A
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          51177 1 -    147782 A
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    4541 1 +     26176 A
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258408031 1 - 285822530 A
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        24781 1 +     39228 A
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            54167 1 +     63517 A
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        79429 1 +    116806 A
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     32420 1 -     33031 A
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3086897 1 -   3498232 A
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    14235 1 +     22452 A
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            136887 1 +   3060487 A
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19249636 1 +  19376315 A
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           11467 1 +     84689 A
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3779216 1 +   6799190 A
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20595747 1 -  62548349 A
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11089268 1 +  39895028 A
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             21393 1 +     74745 A
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12707853 1 +  12821369 A
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                 431 1 -     26467 A
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           48298 1 +     63263 A
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                  408 1 -     26361 A
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 3585 1 -      7381 A
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  46823 1 -     79256 A
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196036925 1 + 196197964 A
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11447091 1 +  11645122 A
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   5777 1 -     46448 A
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                3443 1 -     13212 A
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 17120 1 -     55006 A
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43842226 1 +  43892939 A
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               18407 1 -     24607 A
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               5774 1 -     27140 A
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                701889 1 +    802869 A
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43438808 1 -  43563597 A
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4451622 1 -   4543643 A
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            146972 1 +    252755 a
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             37116 1 +     58827 A
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36874678 1 +  64221397 A
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             1931 1 -     87323 A
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_475714                     34 1 +       551 T
i Mesoplodon_bidens.MesBid_scaffold_475714              C 0 C 0
s Microcebus_murinus.CM007691.1                          16511053 1 +  47401472 A
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  39243 1 -     48017 a
i Microgale_talazaci.MicTal_scaffold_34660              I 2 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8211900 1 +  10048721 T
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            36389 1 +     45743 T
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         3369 1 +     29742 A
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        12424 1 -    104932 A
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     6442 1 +      8497 A
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 147315 1 +    154973 A
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                162357 1 +    265003 A
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  2408 1 -     19904 A
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  145843 1 -    168139 A
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          23355 1 -    100666 A
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             13189 1 +     98495 A
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4425302 1 -  28371801 A
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     91304 1 -    117718 A
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               970209 1 +   8389877 a
i Myotis_brandtii.KE161952.1                            I 234 C 0
s Myotis_davidii.KB114863.1                               5021634 1 +   6462685 a
i Myotis_davidii.KB114863.1                             I 233 C 0
s Myotis_lucifugus.GL429887.1                             3467712 1 -   3747815 A
i Myotis_lucifugus.GL429887.1                           I 235 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        12955 1 +     66751 A
i Myotis_myotis.MyoMyo_scaffold_6123                    I 233 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             5960 1 -      8794 A
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nasalis_larvatus.k141_153429                               9847 1 +     48152 A
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4485814 1 -  14209539 A
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3951927 1 -   4490290 A
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Nomascus_annamensis.k141_220265                            1744 1 +      1763 A
i Nomascus_annamensis.k141_220265                       C 0 n 0
s Nomascus_concolor.k141_226614                              2534 1 -      5092 A
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_1032971                            108 1 -      1918 A
i Nomascus_gabriellae.k141_1032971                      C 0 I 42
s Nomascus_siki_b.tarseq_80                             26286 1 -  18771707 A
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  3956 1 +      4512 A
i Nomascus_siki_a.k141_595747                             C 0 I 42
s Nyctereutes_procyonoides.CAJHUB010000786.1                32052 1 +   3668941 A
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65567921 1 -  95554990 A
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            4647 1 +      6470 A
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65670256 1 +  89412551 A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Octodon_degus.JH651621.1                                3686802 1 +  10294119 A
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             680481 1 -   3126709 A
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1080595 1 +   1425656 A
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         37883 1 +     78940 A
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Orcinus_orca.KB316965.1                                 7225612 1 -   7562323 A
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              60872 1 -     66828 A
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141877272 1 + 163896628 A
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      309347 1 -    505867 A
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        1548 1 -     53940 A
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18009529 1 -  38779656 A
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134078184 1 - 275406953 A
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      79399 1 +    140051 A
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  35236 1 +    295523 A
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3638986 1 +  18214204 A
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5028662 1 -   6340057 A
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1067033 1 -   1292953 A
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188157602 1 - 188283584 A
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                               694 1 +     25005 A
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47514979 1 +  47705337 A
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 68969 1 -    104429 A
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    7498 1 +     14967 A
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 3363 1 -      7628 A
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    116721 1 -    135482 A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           6233 1 -     23713 A
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            25547 1 -     27972 A
i Perodicticus_potto.k141_713187                        C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    14534 1 -     36578 A
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_648925              216 1 -       346 A
i Phocoena_phocoena.PhoPho_flattened_line_648925        N 0 C 0
s Piliocolobus_badius.k141_1987485                           3376 1 -      5908 A
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       3994 1 -     17985 A
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            3361 1 +      7694 A
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26741845 1 +  26888534 A
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pithecia_albicans.k141_991845                             44783 1 -     61926 A
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        26166 1 +     78826 A
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                             10214 1 -     15800 A
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        13413 1 -     16101 A
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          6642 1 +      9673 A
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13475642 1 -  19735023 A
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           14545 1 -     31692 A
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           6533 1 +     21690 A
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       23881 1 +     44506 A
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        24093 1 +     67491 A
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      14333 1 -     98129 A
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     23933 1 +    147771 A
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                          569 1 -     43940 A
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          4652 1 -     55515 A
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         24006 1 +    152463 A
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       1723 1 -    119457 A
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         13729 1 +    134592 A
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          24316 1 -     75465 A
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              188480 1 -    373494 A
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19809127 1 +  19899266 A
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               7126 1 -     15069 A
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              7241 1 +     14865 A
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6849398 1 +  12164890 A
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     19565 1 -     30946 n
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         4470 1 +     11805 A
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           43818 1 +     52369 A
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         36205 1 -     44753 A
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            18128 1 +     27322 A
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       17762 1 -     53241 A
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         40026 1 -     48185 A
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Pteronotus_parnellii.KE867983.1                            5003 1 -     27784 A
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        247613 1 -    344369 A
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13246893 1 -  17261082 A
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             604844 1 -   3946241 A
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131535257 1 - 161321710 a
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             31229 1 +     56732 A
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6807723 1 +   6970761 A
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             7116 1 +     18040 A
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                16707 1 +     68503 A
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1788782 1 +   2252614 A
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                            1513 1 -     17045 A
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206379001 1 - 206558726 A
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44857903 1 -  45163003 A
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                20232 1 +    109198 A
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       8859 1 +     12214 A
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15673730 1 -  43202129 A
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        5643 1 +     34089 A
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              5585 1 -     60842 A
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              5678 1 +     67014 A
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              5656 1 +     60816 A
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 5593 1 -     76454 A
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17342330 1 -  30362882 A
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         21691 1 -     62485 A
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   37602 1 -    114521 A
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        4733 1 +     15331 A
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      10108 1 +     20762 A
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         120114 1 +    130994 A
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           38892 1 +     46263 A
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     32037 1 +     42640 A
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        15058 1 +     30600 A
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            19809 1 +    739146 T
i Solenodon_paradoxus.SolPar_flattened_line_1012        I 14 C 0
s Sorex_araneus.JH798170.1                               17767371 1 -  27805282 T
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2240674 1 +   2842873 a
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             235987 1 -    276980 A
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            28502 1 +     62062 A
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189273012 1 + 218635234 A
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        16232 1 -  13920577 A
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                1200 1 +     20549 A
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               15626 1 +     45698 A
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      808054 1 +   1148477 A
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  58766 1 +     99546 A
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194009130 1 - 194193292 A
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             39894 1 -     47444 A
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  6436 1 +      6782 A
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  136983 1 -    259118 A
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        28218 1 +     38948 A
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   21940 1 -     32910 A
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      3352 1 -     12939 A
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       3270 1 -     14244 A
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           44667 1 -     54611 A
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        2464 1 -     11566 A
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     4647 1 -     15592 A
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          3299 1 +     14371 A
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   1586 1 +     12481 A
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        1460 1 -     24393 A
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       6710 1 -     28054 A
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44661494 1 -  44834318 A
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       3810 1 +     13828 A
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   6053 1 +     90398 A
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16086761 1 +  31416278 A
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2794311 1 -   3938065 A
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    6396 1 +     13056 A
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69314328 1 -  96451834 A
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   8185 1 +     10241 A
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6515732 1 +  28682327 A
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  6037 1 -     20643 A
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             25572 1 -     33872 A
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1525552 1 -   2331223 A
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                139447 1 -    281493 A
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       127790 1 -    134049 A
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        215208 1 -    227762 A
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           7820 1 -      8775 A
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Eptesicus_fuscus.JH977687.1                             4707870 0 +   6522550 C
e Ochotona_princeps.JH802095.1                            4996729 2205 -  23139505 I
e Perognathus_longimembris.PerPac_flattened_line_19359        892 695 +     49596 I
e Procavia_capensis.ProCapCap_scaffold_149274                2467 1156 -      9567 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Micronycteris_hirsuta.MicHir_scaffold_37978               23827 0 -     32043 C
e Megaderma_lyra.MegLyr_scaffold_3562                       64783 239 -    234502 I
e Heterohyrax_brucei.HetBruBak_scaffold_25354               61360 1157 +     73687 I
e Equus_przewalskii.ATBW01073585.1                          14102 0 +     92910 C
e Equus_caballus.CM000402.2                              13352612 0 +  41866177 C
e Equus_asinus.JREZ01000062.1                             5854112 0 -   7175178 C
e Echinops_telfairi.JH980316.1                           22999931 2 -  44670279 I
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1008 325 -      5782 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19677 266 -    119109 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     16751 0 -     20485 C
e Microtus_ochrogaster.CM001673.1                        22820377 122 -  98408828 I
e Tarsius_wallacei.k141_48636                               60532 3805 +     65473 I
e Tarsius_lariang.k141_609102                               27216 3812 +     42269 I
e Sigmodon_hispidus.SigHis_scaffold_11332                  100998 122 -    120886 I
e Rattus_norvegicus.chr11                                13915860 1475 +  90463843 I
e Psammomys_obesus.NESX01026517.1                           36232 122 +     77221 I
e Peromyscus_maniculatus.KI615518.1                       4951147 122 -   8017169 I
e Onychomys_torridus.OnyTor_scaffold_12578                  37821 122 +     62360 I
e Ondatra_zibethicus.OndZib_scaffold_6821                  125630 120 +    145789 I
e Nannospalax_galili.KL201303.1                            119159 6 +    362372 I
e Mus_spretus.CM004110.1                                 74333152 260 +  97876770 I
e Mus_pahari.LT608305.1                                  67556620 256 +  89017189 I
e Mus_musculus.chr16                                     75490417 259 +  98207768 I
e Mus_caroli.LT608236.1                                  70767340 259 +  92629107 I
e Mesocricetus_auratus.KB708139.1                         1047652 119 -  26018355 I
e Meriones_unguiculatus.MerUng_scaffold_52233               13942 122 +     15977 I
e Ellobius_talpinus.LOJH01090055.1                           7187 122 -      7838 I
e Ellobius_lutescens.LOEQ01003611.1                        240062 122 -    369425 I
e Dolichotis_patagonum.DolPat_scaffold_14102                36772 276 -     73477 I
e Dasyprocta_punctata.DasPun_flattened_line_634             59553 276 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                18462 277 +     26546 I
e Cricetulus_griseus.LT883672.1                          53029979 121 +  72327488 I
e Cricetomys_gambianus.CriGam_scaffold_949                 279183 147 -    399297 I
e Cephalopachus_bancanus.k141_702587                         8788 3391 +     21754 I
e Cavia_tschudii.CavTsc_scaffold_488                       177453 271 +    436027 I
e Cavia_porcellus.DS562889.1                             15799262 290 -  24440124 I
e Cavia_aperea.AVPZ01000278.1                            15787326 288 -  24422027 I
e Carlito_syrichta.NW_007248099.1                          309764 3411 +    345090 I
e Acomys_cahirinus.AcoCah_scaffold_1625                    113481 121 -    189883 I
e Pan_paniscus.CM003386.1                               127575888 480 - 205426864 I
e Pan_troglodytes.CM009241.2                            120153042 480 - 196562556 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               14884 42 +    209709 CAGAAT-TGACATT--TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
s Acinonyx_jubatus.LLWD01000356.1                         2034898 42 +   3721120 CAGAAT-Tgacatt--tta-tc----aa-aa----ta-at-aa-----a-a----t--t-t-----------tt-gaagttt
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10658246 42 +  23371972 cagaat-tgacatt--tta-tc----aa-aa----ta-at-aa-----a-a----t--t-t-----------tt-gaagttt
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 I 216
s Ailurus_fulgens.LNAC01000003.1                          7095597 42 -  16596857 cagaat-tgacatt--tta-tc----aa-aa----ta-at-aa-----c-a----a--t-t-----------tt-gaaGTTC
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   18255 42 -     22067 cAGCAT-TGACATT--TTA-TT----AA-AAA----G-CT-AA-----T-G----T--C-A-----------TC-GGAGCTT
i Allactaga_bullata.AllBul_scaffold_70162               I 410 C 0
s Allenopithecus_nigroviridis.k141_2469532                   2613 36 -     60446 CAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         3330 36 -     29318 CAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         2266 36 +     38766 CAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          3224 36 -     80423 CAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            11198 42 -     18050 CAGAAT-TGACATT--TTG-TC----AA-AAA----G-TT-AA-----A-A----T--G-T-----------TT-GAAATGT
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_1710068                                914 42 +      1555 CAGAAT-TGACATT--TTG-TC----AA-AAA----G-TT-AA-----A-A----T--G-T-----------TT-GAAATGT
i Alouatta_caraya.k141_1710068                          C 0 C 0
s Alouatta_discolor.k141_811576                             11871 42 -     21359 CAGAAT-TGACATT--TTG-TC----AA-AAA----G-TT-AA-----A-A----T--G-T-----------TT-GAAATGT
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                1494 42 +      2129 CAGAAT-TGACATT--TTG-TC----AA-AAA----G-TT-AA-----A-A----T--G-T-----------TT-GAAATGT
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_2177643                           878 42 -      1868 CAGAAT-TGACATT--TTG-TC----AA-AAA----G-TT-AA-----A-A----T--G-T-----------TT-GAAATGT
i Alouatta_macconnelli.k141_2177643                     C 0 C 0
s Alouatta_nigerrima.k141_3537692                             927 42 +      1660 CAGAAT-TGACATT--TTG-TC----AA-AAA----G-TT-AA-----A-G----T--G-T-----------TT-GAAATGT
i Alouatta_nigerrima.k141_3537692                       C 0 C 0
s Alouatta_palliata.k141_2764429                              840 42 -      1480 CAGAAT-TGACATT--TTG-TC----AA-AAA----G-TT-AA-----A-A----T--G-T-----------TT-GAAATGT
i Alouatta_palliata.k141_2764429                        C 0 C 0
s Alouatta_puruensis.k141_131505                              134 42 +      4855 CAGAAT-TGACATT--TTG-TC----AA-AAA----G-TT-AA-----A-A----T--G-T-----------TT-GAAATGT
i Alouatta_puruensis.k141_131505                        C 0 C 0
s Alouatta_seniculus.k141_1531728                            1055 42 -      1692 CAGAAT-TGACATT--TTG-TC----AA-AAA----G-TT-AA-----A-G----T--G-T-----------TT-GAAATGT
i Alouatta_seniculus.k141_1531728                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3521034 43 +   4113121 GAGATT-CAACATT--TTC-Tc----aa-aa-----a--g-at-----a-a----c--a-t--------ttttt-taGGTTT
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      391439 42 -    631301 TAGTAT-GGACATT--TTA-TC----AA-AA----AGCTT-AA-----A-A----A--A-T------------T-TAGGTTT
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            31619 43 +     33004 GAGAAT-CAACATT--TTC-TT----AA-AA-----A--G-AT-----A-A----C--A-TT-G---T----TT-TAGGTTT
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 63545 42 +     78111 CAGAAT-TGACATT--TTG-TC----AA-AAA----G-TT-AA-----A-A----T--G-T-----------TT-GAAATGT
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            6487 42 +     22701 CAGAAT-TGACATT--TTG-TC----AA-AAA----G-TT-AA-----A-A----T--G-T-----------TT-GAAATGT
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5750444 42 +   9889416 CAGAAT-TGACATT--ttg-tc----aa-aaa----g-tt-aa-----a-a----t--g-t-----------tt-gaaatgt
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             7033 42 -    104377 CAGAAT-TGACATT--TTG-TC----AA-AAA----G-TT-AA-----A-A----T--G-T-----------TT-GAAATGT
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               7035 42 +     23246 CAGAAT-TGACATT--TTG-TC----AA-AAA----G-TT-AA-----A-A----T--G-T-----------TT-GAAATGT
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_231055                      958 25 -      2492 ---------------------t----aa-aga----g-tt-aa-----a-a----T--C-C-----------TT-AGACTTC
i Aplodontia_rufa.AprRuf_scaffold_231055                N 0 C 0
s Arctocebus_calabarensis.k141_587554                        1827 42 +      9265 TAGAAT-TGACATT--TTA-TC----AG-ACA----G-CT-AC-----A-A----T--C-T-----------TT-GAATTTT
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 9856 42 -     29036 TAGTAT-GGACATT--TTA-TC----AA-AA----AGCTT-TA-----A-A----A--A-T------------T-TAGGTTT
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9540309 42 +  39197703 CAGAAT-TGACATT--TTG-TC----AA-AAA----G-TT-AA-----A-A----T--G-T-----------TT-GAAATGT
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             61580 42 +     85812 CAGAAT-TGACATT--TTG-TC----AA-AAA----G-TT-AA-----A-A----T--G-T-----------TT-GAAATGT
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                12593 42 +     89302 CAGAAT-TGACATT--TTG-TC----AA-AAA----G-TT-AA-----A-A----T--G-T-----------TT-GAAATGT
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             17096 42 -     58268 CAGAAT-TGACATT--TTG-TC----AA-AAA----G-TT-AA-----A-A----T--G-T-----------TT-GAAATGT
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             65088 42 +    119057 CAGAAT-TGACATT--TTG-TC----AA-AAA----G-TT-AA-----A-A----T--G-T-----------TT-GAAATGT
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               7059 42 -     25888 CAGAAT-TGACATT--TTG-TC----AA-AAA----G-TT-AA-----A-A----T--G-T-----------TT-GAAATGT
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 7563 53 -     16375 TAGAAT-TGACATT--TTA-TC----AA-AAA----G-TT-AA-----A-A----T--C-TTTGAAGTTTATTT-GAAGGTT
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               1179 53 +      6337 TAGAAT-TGACATT--TTA-TC----AA-AAA----G-TT-AA-----A-A----T--C-TTTGAAGTTTATTT-GAAGGTT
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26381098 42 +  51448160 TGGAAT-caacatt--ttc-tc----aa-aa-----agat-aA-----C-A----C--T-T-----------TT-CAGGTTT
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        6270 42 -     13118 TGGAAT-CAACATT--TCC-TC----AA-AA-----AGAT-AA-----C-A----C--T-T-----------TT-CAGGTTT
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   44140 43 -     72089 GAGATT-CAACATT--TTC-TC----AA-AA-----A--G-AT-----A-A----C--A-TTT----T----TT-TAGGTTT
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6560762 44 +   6870073 CAGATT-CAACATT--TTC-tc----aa-aa-----a--g-at-----a-a----c--a-t-------tttttt-taggTTT
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138140877 44 - 161108492 GAGATT-CAACATT--TTC-Tc----aa-aa-----a--g-at-----a-a----c--a-t-------tttttt-taggTTT
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     573418 44 -    998990 GAGATT-CAACATT--TTC-tc----aa-aa-----a--g-at-----a-a----c--a-t-------tttttt-taggTTT
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136296610 44 - 158972876 GAGATT-CAACATT--TTC-tc----aa-aa-----a--g-at-----a-a----c--a-t-------tttttt-taggTTT
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1233692 43 -   1914593 GAAATT-CAACATT--TTC-Tc----aa-aa-----a--g-at-----a-a----c--a-t--------ttttt-taGGTTT
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               114946 42 -    171031 CAGAAT-TGATATT--TTG-TT----AA-AAA----G-TT-AA-----A-A----T--G-T-----------TT-GAAATGT
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 13975 42 +    125063 CAGAAT-TGATATT--TTG-TT----AA-AAA----G-TT-AA-----A-A----T--G-T-----------TT-GAAATGT
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                16018 42 -    216513 CAGAAT-TGATATT--TTG-TT----AA-AAA----G-TT-AA-----A-A----T--G-T-----------TT-GAAATGT
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        8561 42 -    134917 CAGAAT-TGATATT--TTG-TT----AA-AAA----G-TT-AA-----A-A----T--G-T-----------TT-GAAATGT
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3220449 42 -   8989139 TAAAAt-caacatt--ttc-tc----aa-aa-----a-gataa-----a-a----t--t-t-----------tt-tacattt
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           398150 42 -  15254737 TAAAAt-caacatt--ttc-tc----aa-aa-----a-gataa-----a-a----t--t-t-----------tt-tacattt
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2973886 42 +   6889770 TAAAAt-caacatt--ttc-tc----aa-aa-----a-gataa-----a-a----t--t-t-----------tt-tacattt
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11520611 42 +  39901454 CAAAAC-TGACATT--TTG-TC----AA-AA-T---A-AT-AA-----A-A----T--T-T-----------TT-GAAGTTT
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   15636 42 +     87036 CAAAAC-TGACATT--TTG-TC----AA-AA-T---A-AT-AA-----A-A----T--T-T-----------TT-GAAGTTT
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11267280 42 -  35597290 CAAAAC-TGACATT--ttg-tc----aa-aa----ta-at-aa-----a-a----t--t-t-----------tt-gaagttt
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11089813 42 +  39895921 CAAAAC-TGACATT--ttg-tc----aa-aa----ta-at-aa-----a-a----t--t-t-----------tt-gaagttt
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16456826 42 -  44759192 CAAAAC-TGACATT--ttg-tc----aa-aa----ta-at-aa-----a-a----t--t-t-----------tt-gaagttt
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21326109 22 + 157394656 GAGATT-CAACATT--ttc-tc----aa-aa---------------------------------------------------
i Capra_aegagrus.CM003214.1                             C 0 I 17
s Capra_hircus.CM004562.1                               135707337 22 - 157403528 GAGATT-CAACATT--ttc-tc----aa-aa---------------------------------------------------
i Capra_hircus.CM004562.1                               C 0 I 17
s Carollia_perspicillata.CarPer_scaffold_4436               60646 42 +     67245 TAGTAT-GGACATT--TTA-TC----AT-AA----AGCTT-AA-----A-A----A--A-T------------T-TAAGTTT
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   32010 42 +     33760 TGAAAT-TGACATT--TTG-CC----AC-AAA----A-TT-AA-----A-A----T--C-T-----------TT-GAAGTTT
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   159782 40 -    276539 TAGAAT-GAACATT--CTC-TC----AA-AA-----A-A--AT-----A-A----A--A-T-----------TT-TAGGTTC
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18891786 42 -  29618158 CAGAAC-TGACATT--TTG-TC----AA-AAA----G-TT-AA-----A-A----T--G-T-----------TT-GAAATGT
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 9330 42 -     26817 CAGAAC-TGACATT--TTG-TC----AA-AAA----G-TT-AA-----A-A----T--G-T-----------TT-GAAATGT
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                13573 42 +     25043 CAGAAC-TGACATT--TTG-TC----AA-AAA----G-TT-AA-----A-A----T--G-T-----------TT-GAAATGT
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4364815 42 +   7569818 TAGAAC-TGGCATT--TTA-TC----AA-AA----GG-Gt-aa-----a-a----t--t-t-----------tt-cagattt
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         4572 42 -      9338 TAGAAC-TGGCATT--TTA-TC----AA-AA----AG-GT-AA-----A-A----T--T-T-----------TT-CAGATTT
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6556560 36 +   6739814 CAGAAT-T--------Ttg-tc----aa-aaa----g-tt-aa-----a-a----t--c-t-----------tt-gaaatgt
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      28034 36 +     60454 CAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          3241 36 -     21101 CAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         60551 36 -    107033 CAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        3430 36 -     17608 CAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                           589 36 +     45019 CAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                            673 36 +     15177 CAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          3473 36 +     16677 CAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           25642 36 +     35983 CAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11992171 36 +  12117833 CAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46478928 36 +  46592721 CAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      42483 36 -     45581 CAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       3485 36 +     35577 CAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        3258 36 -     25661 CAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        3238 36 -     17744 CAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        22843 36 +     37128 CAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           3699 42 -      6963 CAGAAT-TGATGTT--TTA-TC----AA-AAA----T-GT-AA-----A-C----T--C-T-----------TT-GAAGTAT
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           59838 53 -     68416 TAGAAT-TGACATT--TTA-TC----AA-AAA----G-TT-AA-----A-A----T--C-TTTGAAGTTTATTT-AAAGGTT
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            8886 53 +     13308 TAGAAT-TGACATT--TTA-TC----AA-AAA----G-TT-AA-----A-A----T--C-TTTGAAGTTTATTT-GAAGGTT
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             6603 42 -     18223 AAGAAT-TGATATT--TTG-TC----AA-AAA----G-TT-AA-----A-A----T--G-T-----------TT-GAAATGT
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             23621 42 +     25473 AAGAAT-TGATATT--TTG-TC----AA-AAA----G-TT-AA-----A-A----T--G-T-----------TT-GAAATGT
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           42661 42 +     57117 AAGAAT-TGATATT--TTG-TC----AA-AAA----G-TT-AA-----A-A----T--G-T-----------TT-GAAATGT
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          47340 42 +     54541 AAGAAT-TGATATT--TTG-TC----AA-AAA----G-TT-AA-----A-A----T--G-T-----------TT-GAAATGT
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15962630 25 +  43084221 TAGAGT-TGACATT--TTA-CC----AA-AGA----A-T-------------------------------------------
i Chinchilla_lanigera.JH721867.1                        C 0 I 8
s Chiropotes_israelita.k141_1189915                         72147 42 +    196370 CAGAAT-TGATATT--TTG-TT----AA-AAA----G-TT-AA-----A-A----T--G-T-----------TT-GAAATGT
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          16327 42 +     40510 CAGAAT-TGATATT--TTG-TT----AA-AAA----G-TT-AA-----A-A----T--G-T-----------TT-GAAATGT
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15140840 36 -  15256731 CAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      35449 36 -     53260 CAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101146008 36 + 101219884 CAGAAT-T--------Ttg-tc----aa-aaa----g-tt-aa-----a-a----t--c-t-----------tt-gaaatgt
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                17415 42 -     21363 TAGAAT-TGATGTT--TTA-TC----AA-AAT----T-GT-AA-----A-G----T--T-T-----------TT-GAAGTAT
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           762720 42 +    964067 TAGAAT-TGATGTT--TTA-TC----AA-AAT----T-GT-AA-----A-G----T--T-T-----------TT-GAAGTAT
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10888000 36 +  10971483 NNNNNN-N--------NNN-NN----NN-NNN----N-NN-NN-----N-N----N--N-N-----------NN-NNNNNNN
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147665928 36 + 156195979 CAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            17911 36 +     23629 CAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60620469 47 +  78930452 TAGAAC-TGACATT--TTA-ct----aa-ga-----t-gataaaataaa-a----t--g-t-----------tt-aagtttt
i Condylura_cristata.JH655880.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_848148              458 20 +      1327 TTGAAA-TAACATC--TTA-TC----AG------------------------------------------------------
i Crocidura_indochinensis.CroInd_scaffold_848148        C 0 I 18
s Cryptoprocta_ferox.CryFer_flattened_line_19014            52950 42 -     70449 TTGAAT-TGACATT--TTA-TT----AA-AA-T---A-AT-AA-----A-A----T--T-T-----------TT-GAAGTTT
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  209359 42 -    956709 CAGAAT-TGACATT--TTA-TT----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GACGTTT
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 31979 42 -     67205 TAGAGT-TAGCATT--TTA-GC----AA-AGA----G-TT-AA-----A-A----T--C-T-----------TT-GAAGTCC
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          184542 43 -   6883506 CAGAAT-TGatgtt--tta-ta----aaaaaa----t-gt-aa-----a-g----t--t-t-----------TT-GAAATAT
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16845709 42 +  31942871 TAGAAT-TGACATT--TTA-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAGGTT
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80037726 42 -  96802777 TGGAAT-Caacatt--ttc-tc----aa-aa-----agat-aA-----C-A----C--T-T-----------TT-CAGGTTT
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18699932 42 -  18957592 tagtat-ggacatt--tta-tc----aG-AA----GGCTT-AA-----A-A----A--C-T------------T-TAGGCTT
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 323467 42 +    993696 TAGAAC-TGGCATT--TTa-tc----aa-aa----ag-gt-aa-----a-a----t--t-t-----------tt-cagattt
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   4119 42 +    151128 TAGAAC-TGGCATT--TTA-TC----AA-AA----AG-GT-AA-----A-A----T--T-T-----------TT-CAGATTT
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   157829 25 +    228994 TAGAAT-TGACATT--CTG-CC----CA-AGA----G-T-------------------------------------------
i Dinomys_branickii.DinBra_scaffold_1996                C 0 I 8
s Dipodomys_ordii.KN672545.1                              3657282 42 +   4240102 TAAAAT-TGACTTT--GTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-AAAACTT
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_285155                  210 42 -       736 TAAAAT-TGACTTT--GTG-TC----AA-AAA----G-tt-aa-----a-a----t--c-t-----------tt-aaaactt
i Dipodomys_stephensi.DipSte_scaffold_285155            C 0 C 0
s Eidolon_helvum.KE772537.1                                 13174 43 +     24177 tagtat-tgacatt--tta-ta----aa-aa----ag-gt-aa-----a-aa---a--a-a-----------at-taggttt
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01171074.1                         104 44 -       242 GAGAAT-CAACATT--TTC-Tc----aa-aa-----a--g-at-----a-a----c--a-t-------tttttt-taggTTT
i Elaphurus_davidianus.JRFZ01171074.1                   n 43 n 43
s Elephantulus_edwardii.JH947210.1                        7829638 24 +  15467074 TCTAAT-TGAATTT--TCA-TC----AA-AAA----T---------------------------------------------
i Elephantulus_edwardii.JH947210.1                      C 0 I 1
s Enhydra_lutris.KZ291749.1                              85873120 41 +  99434291 CAGAAT-TGACatt--tta-tc----aa--a----ta-at-aa-----a-a----a--t-t-----------tt-gaagttC
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4707870 35 +   6522550 TAGTAT-TGACATT--TTa-tc----aa-aa----aggtt-aa-----a-a----a--ttt---------------------
i Eptesicus_fuscus.JH977687.1                           C 0 I 6
s Equus_asinus.JREZ01000062.1                             5854112 34 -   7175178 --------GACATT--TCA-TC----AC-AA----AG-G--TA-----A-A----G--A-T-----------TT-GAGGTTT
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13352612 34 +  41866177 --------GACATT--TCA-TC----AC-AA----AG-G--TA-----A-A----G--A-T-----------TT-GAGGTTT
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          14102 34 +     92910 --------GACATT--TCA-TC----AC-AA----AG-G--TA-----A-A----G--A-T-----------TT-GAGGTTT
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erythrocebus_patas.Contig8                             48778019 36 -  48907691 CAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          315938 42 +    330699 TGGAAT-CAACATT--TTC-TC----AA-AA-----AGAT-AA-----C-A----C--T-T-----------TT-CAGGTTT
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             62394 42 +     89355 TGGAAT-CAACATT--TTC-TC----AA-AA-----AGAT-AA-----C-A----C--T-T-----------TT-CAGGTTT
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              5884 42 +     13586 TAGAAT-TGATATT--TTA-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAGTTT
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               5816 42 -      6809 TAGAAT-TGACATT--TTA-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAGTTT
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            12290 42 +     36558 TAGAAT-TGACATT--TTA-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAGGTT
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             8611 42 +     60246 TAGAAT-TGACATT--TTA-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAGGTT
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                12089 42 +    109717 TAGAAT-TGACATT--TTA-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAGTTT
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                   74 42 -     19505 TAGAAT-TGACATT--TTA-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAGGTT
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                16749 42 +     27497 TAGAAT-TGACATT--TTA-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAGTTT
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           19205 42 +     26808 TAGAAT-TGACATT--TTA-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAGGTT
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                33943 42 +     46535 TAGAAT-TGACATT--TTA-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAGTTT
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              16669 42 -     29447 TAGAAT-TGACATT--TTA-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAGTTT
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129893870 42 - 159252932 cagaat-tgacatt--tta-tc----aa-aa----ta-at-aa-----a-a----t--t-t-----------tt-gaagttt
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129280954 42 - 158578461 CAGAAT-Tgacatt--tta-tc----aa-aa----ta-at-aa-----a-a----t--t-t-----------tt-gaagttt
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 22094 42 +     52776 CAGAAT-TGACATT--TTA-TC----AA-AA-T---A-AT-AA-----A-A----T--T-T-----------TT-GAAGTTT
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13892292 23 -  19261668 TTTAGT-TAACATT--TTA-TC----AA-AGA--------------------------------------------------
i Fukomys_damarensis.KN123630.1                         C 0 I 17
s Galago_moholi.ctg555                                     211734 42 -    847004 TAGAAT-TGACATT--TTA-TC----AA-ACA----G-CT-AA-----A-A----T--C-T-----------TA-AAAGTTT
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           14108 42 -     43889 TAGAAT-TGACATT--TTA-TC----AA-ACA----G-CT-AA-----A-A----T--C-T-----------TA-GAAGTTT
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          11174 42 +     27357 TAGAAT-TGACATT--TTA-TC----AA-ACA----G-CT-AA-----A-A----T--C-T-----------TT-GAAGTTT
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               157216 42 +    324696 CAGAAT-TGACATC--CTA-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAGTTT
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    182154 44 -    189561 GAGAAT-CAACATT--TTC-Tc----aa-aa-----a--g-at-----a-a----c--a-t-------tttttt-tatgttt
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           14681 29 -     18683 CAGAAT-TGACAGT--TTA-CT----AA-AAA----G-CT-TA-----A---------------------------------
i Glis_glis.GliGli_scaffold_79770                       C 0 I 12
s Gorilla_beringei.k141_111300                               6597 42 -     14630 CAGAAC-TGACATT--TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119653697 42 - 195582420 CAGAAC-TGACATT--Ttg-tc----aa-aaa----g-tt-aa-----a-a----t--c-t-----------tt-gaaatgt
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   78100 41 +    118900 CAGAAT-TGACAGT--TTA-AT----AA-A-A----G-TT-TA-----A-A----T--T-T-----------TT-AAAGTTT
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         2670 46 +     10286 TAGAAT-TGACATT--TTA-TC----AA-AGATTTTA-TT-AA-----A-A----T--C-T-----------TT-GAAGGTT
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             1150 46 -     11661 TAGAAT-TGACATT--TTA-TC----AA-AGATTTTA-TT-AA-----C-A----T--C-T-----------TT-GAAGGTT
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             6476 46 +     56096 TAGAAT-TGACATT--TTA-TC----AA-AGATTTTA-TT-AA-----A-A----T--C-T-----------TT-GAAGGTT
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        29725 46 -     42470 TAGAAT-TGACATT--TTA-TC----AA-AGATTTTA-TT-AA-----A-A----T--C-T-----------TT-GAAGGTT
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        46353 46 -     54384 TAGAAT-TGACATT--TTA-TC----AA-AGATTTTA-TT-AA-----A-A----T--C-T-----------TT-GAAGGTT
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              18147 41 +     53719 TTGATT-TG-TATT--TTA-TC----AA-GA-T---A-AT-AA-----A-A----T--T-T-----------TT-GAAGTTT
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                28394 43 -     91191 GAGATT-CAACATT--TTC-TC----AA-AA-----A--G-AT-----A-A----C--A-TTT----T----TT-TAGGTTT
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2552010 44 +  31725842 tttagt-GGACATTTTTTA-TC----AA-Aga----g-tt-aa-----a-a----t--t-t-----------tt-gaagtct
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              148032 42 +    277961 CAGAAT-TAACATC--ACT-TC----TA-AA-----AGGT-AA-----C-G----C--T-T-----------TT-TAGGCTT
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      279329 45 -    477199 TAGTAT-CGACATT--TTa-tc----aa-aa----ag-gt-ta-----a-aaa--a-aa-a-----------aa-aaggtta
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              8479 45 -      9143 TAGTAT-CGACATT--TTA-TC----AA-AA----AG-GT-AA-----A-A--AAAA-A-A-----------AA-AAGATTA
i Hipposideros_galeritus.HipGal_scaffold_104691         I 325 I 61
s Hoolock_leuconedys.ctg79                                      6284 42 -   7690867 CAGAAC-TGACATT--TTG-TC----AA-AAA----G-CT-AA-----A-A----T--A-T-----------TT-GAAATGT
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 18216 42 -     67322 CTGAAT-TGATATT--TTA-TC----AA-AA-T---A-AT-AA-----A-A----T--T-T-----------TT-GAAGCTT
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hylobates_abbotti.k141_164775                              1065 42 -      2073 CAGAAC-TGACATT--TTG-TC----AA-AAA----G-TT-AA-----A-A----T--A-T-----------TT-GAAATGT
i Hylobates_abbotti.k141_164775                         C 0 C 0
s Hylobates_agilis.k141_55853                                 650 42 -      1487 CAGAAC-TGACATT--TTG-TC----AA-AAA----G-TT-AA-----A-A----T--A-T-----------TT-GAAATGT
i Hylobates_agilis.k141_55853                           I 87 I 21
s Hylobates_klossii.k141_468230                               621 42 +      5464 CAGAAC-TGACATT--TTG-TC----AA-AAA----G-TT-AA-----A-A----T--A-T-----------TT-GAAATGT
i Hylobates_klossii.k141_468230                         I 144 I 34
s Hylobates_pileatus_b.ContigUN                                 14625973 42 -  25970782 CAGAAC-TGACATT--TTG-TC----AA-AAA----G-TT-AA-----A-A----T--A-T-----------TT-GAAATGT
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_950183                              668 42 +      2027 CAGAAC-TGACATT--TTG-TC----AA-AAA----G-TT-AA-----A-A----T--A-T-----------TT-GAAAGGT
i Hylobates_muelleri.k141_950183                        C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             35133 42 -     60944 CAGAAC-TGACATT--TTG-TC----AA-AAA----G-TT-AA-----A-A----T--A-T-----------TT-GAAATGT
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     7078 42 +     22540 TAGAGT-TGCCATT--TTA-TC----AA-AGA----A-TT-AA-----A-A----T--C-T-----------TT-GAAGTCC
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7126759 42 +  13083262 CAGAAT-TGACTTT--TTA-CT----AG-AAA----G-TT-AA-----A-A----t--c-t-----------tt-gaacttt
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_5141390                                   1196 53 -      3181 CAGAAC-TGACATT--TTA-TC----AA-AAA----G-TT-AA-----A-A----T--C-TTTGAAGTTTATTT-GAAGGTT
i Indri_indri.k141_5141390                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               9932 42 +     17520 TGGAAT-CAACATT--TTC-TC----AA-AA-----AGAT-AA-----C-A----C--T-T-----------TT-CAGGTTT
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH727545.1                                 1879 26 -      4668 --------------------tt----aa-aaa----g-tt-aa-----c-a----t--c-a-----------CT-AGAGCTT
i Jaculus_jaculus.JH727545.1                            n 10229 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               24534 42 +     37189 TGGAAT-CAACATT--TTC-TC----AA-AA-----AGAT-AA-----C-A----C--T-T-----------TT-CAGGTTT
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          51178 42 -    147782 CAGAAT-TGACATT--TTG-TC----AA-AAA----G-TT-AA-----A-A----T--G-T-----------TT-GAAATGT
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    4542 35 +     26176 TAGTAT-TGACATT--TTA-TC----AA-AA----AGGTT-AA-----A-A----AA-T-T---------------------
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 I 6
s Lemur_catta.scaffold_1                                258408032 42 - 285822530 TAGAAT-TGACATT--TTA-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAGGTT
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        24782 53 +     39228 CAGAAT-TGACATT--TTA-TC----AG-AAA----G-TT-AA-----A-A----T--G-TTTGAAGTTTATTT-GAAGGTT
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            54168 53 +     63517 TAGAAT-TGACATT--TTA-TC----AG-AAA----G-TT-AA-----A-A----T--G-TTTGAAGTTTATTT-GAAGGTT
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        79430 53 +    116806 TAGAAT-TGACATT--TTA-TC----AG-AAA----G-TT-AA-----A-A----T--G-TTTGAAGTTTATTT-GAAGGTT
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     32421 53 -     33031 TAGAAT-TGACATT--TTA-TC----AG-AAA----G-TT-AA-----A-A----T--G-TTTGAAGTTTATTT-GAAGGTT
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3086898 42 -   3498232 CATAAT-Tgacatt--tta-tc----aa-aa----ta-at-aa-----a-a----a--t-t-----------tt-gaagttt
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    14236 31 +     22452 TAGAAT-TGACATT--TTA-TC----AA-AAA----A-CT-AA-----T-T----A--------------------------
i Lepus_americanus.LepAme_scaffold_62849                C 0 I 10
s Lipotes_vexillifer.KE558548.1                            136888 42 +   3060487 TGGAAT-caacatt--ttc-tc----aa-aa-----agat-aa-----c-a----c--t-t-----------tt-caggttt
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19249637 36 +  19376315 CAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGC
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           11468 42 +     84689 TAGAAT-TGACATT--TTA-TC----AA-ACA----G-CT-AA-----A-A----T--C-T-----------TT-GAAGTTT
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3779217 42 +   6799190 TAGAAT-TGACATT--TTA-TC----AA-ACA----G-CT-AA-----A-A----T--C-T-----------TT-GAAGTTT
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20595748 24 -  62548349 TAGAAT-TAACCTT--TTC-TC----AA-AAA----A---------------------------------------------
i Loxodonta_africana.GL010040.1                         C 0 I 1
s Lycaon_pictus.CM007556.1                               11089269 42 +  39895028 CAAAAC-TGACATT--ttg-tc----aa-aa----ta-at-aa-----a-a----t--t-t-----------tt-gaagttt
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             21394 36 +     74745 CAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12707854 36 +  12821369 CAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                 432 36 -     26467 CAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           48299 36 +     63263 CAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                  409 36 -     26361 CAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 3586 36 -      7381 CAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  46824 36 -     79256 CAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196036926 36 + 196197964 CAGAAT-T--------Ttg-tc----aa-aaa----g-tt-aa-----a-a----t--c-t-----------tt-gaaatgt
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11447092 36 +  11645122 CAGAAT-T--------Ttg-tc----aa-aaa----g-tt-aa-----a-a----t--c-t-----------tt-gaaatgt
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   5778 36 -     46448 CAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                3444 36 -     13212 CAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 17121 36 -     55006 CAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43842227 36 +  43892939 CAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               18408 36 -     24607 CAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               5775 36 -     27140 CAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                701890 44 +    802869 TAGTAT-CAACATT--TTA-TC----AA-AA----AG-GT-AA-----A-A--AAA--A-A-----------AA-TAGGTTT
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43438809 36 -  43563597 CAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4451623 36 -   4543643 CAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            146973 42 +    252755 gagaat-taatatt--tta-tc----ca-aa----ag-gt-aa-----a-a----t--t-t-----------tt-gaggttt
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             37117 41 +     58827 G-GAAT-TAATATT--TCA-TC----CA-AA----AG-GC-AA-----a-a----t--t-t-----------tt-gaggttt
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36874679 42 +  64221397 TAGAAT-TGATTTT--TTA-CT----AG-AAA----G-TT-AA-----A-A----T--C-t-----------tt-gaacttt
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             1932 46 -     87323 CAGAAT-TGACATT--TTA-TTATTTAA-AA-T---A-AT-AA-----A-A----A--T-T-----------TT-GAAGTTC
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_475714                     35 42 +       551 TGGAAT-CAACATT--TTC-TC----AA-AA-----AGAT-AA-----A-A----C--T-T-----------TT-CAGGTTT
i Mesoplodon_bidens.MesBid_scaffold_475714              C 0 C 0
s Microcebus_murinus.CM007691.1                          16511054 53 +  47401472 TAGAAt-tgacatt--tta-tc----aa-aaa----g-tt-aa-----a-a----t--c-tttGAAGTTTATTT-GAaggtt
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  39244 18 -     48017 ta-------acctt--ctt-at----aa-aAA----T---------------------------------------------
i Microgale_talazaci.MicTal_scaffold_34660              C 0 I 1
s Micronycteris_hirsuta.MicHir_scaffold_37978               23827 40 -     32043 --GTAT-GAACATT--TTA-TC----AA-AA----AGCTT-AA-----A-A----A--A-T------------T-TAGGTTT
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8211901 43 +  10048721 TAGTAC-TGACGTT--Tca-tt----aa-aa----aggtt-aa-----a-a----a--a-t-----------tt-tagcttt
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            36390 43 +     45743 TAGTAC-TGACGTT--TCA-TT----AA-AA----AGGTT-AA-----A-A----A--A-T-----------TT-TAGCTTT
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         3370 36 +     29742 CAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        12425 42 -    104932 CATAAT-TGACATT--TTA-TC----AA-AA-T---A-AT-AA-----A-A----A--T-T-----------TT-GAAGTTT
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     6443 53 +      8497 TAGAAT-TGACATT--TTA-TC----AA-AAA----G-TT-AA-----A-A----T--C-TTTGAAGTTTATTT-GAAGGTT
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 147316 42 +    154973 TGGAAT-CAACATT--TTC-TC----AA-AA-----AGAT-AA-----C-A----C--T-T-----------TT-CAGGTTT
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                162358 43 +    265003 TAGTAC-GGACATT--TTA-AT----AA-AA----ATTTTTTT-----T-A----A--A-T------------T-TAGGTTT
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  2409 43 -     19904 GAGAAG-CAACATT--TTC-TC----AA-AA-----A--G-AT-----A-A----C--A-TTT----T----TT-TAGGTTT
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  145844 42 -    168139 TTGATT-TGAAATT--TTA-TC----AT-GA-T---A-AT-AA-----A-T----T--T-T-----------TT-GAAGTTT
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          23356 16 -    100666 TAGGAT-TGACATT--TTA---------------------------------------------------------------
i Murina_feae.MurFea_scaffold_2254                      C 0 I 17
s Muscardinus_avellanarius.MusAve_scaffold_9643             13190 43 +     98495 CAGAAT-TGAAAGT--TTA-AT----AA-AAA----G-CT-TA-----AAA----A--T-T-----------TT-AAGGTTT
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4425303 41 -  28371801 CAGAAT-TGACatt--tta-tc----aa--a----ta-at-aa-----a-a----a--t-t-----------tt-caagttc
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     91305 42 -    117718 TAGAGT-TAACATT--GTA-CT----AA-AGA----G-CT-AA-----A-A----T--C-T-----------TT-GAAGTCC
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               970210 34 +   8389877 tagtat-tgacatt--tta-tc----aa-aa----aggtt-aa-----a-a----a--a-t---------------------
i Myotis_brandtii.KE161952.1                            C 0 I 6
s Myotis_davidii.KB114863.1                               5021635 34 +   6462685 tagtat-tgacatt--tta-tc----ga-aa----aggtt-aa-----a-a----a--a-t---------------------
i Myotis_davidii.KB114863.1                             C 0 I 6
s Myotis_lucifugus.GL429887.1                             3467713 34 -   3747815 TAGTAT-TGACATT--TTa-tc----aa-aa----aggtt-aa-----a-a----a--a-t---------------------
i Myotis_lucifugus.GL429887.1                           C 0 I 6
s Myotis_myotis.MyoMyo_scaffold_6123                        12956 34 +     66751 TAGTAT-TGACATT--TTA-TC----GA-AA----AGGTT-AA-----A-A----A--A-T---------------------
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 I 6
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             5961 42 -      8794 TAGATT-TAATGTT--TTA-TC----AA-AGT----T-GT-AA-----A-G----T--T-T-----------TT-TAAATTT
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nasalis_larvatus.k141_153429                               9848 36 +     48152 CAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4485815 42 -  14209539 CATAAT-Tgacatt--tta-tc----aa-aa----ta-at-aa-----a-a----a--t-t-----------tt-gaagttt
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3951928 42 -   4490290 TGGAAT-caacatt--ttc-tc----aa-aa-----agat-aA-----C-A----C--T-T-----------TT-CAGGTTT
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Nomascus_annamensis.k141_224620                             436 42 -      2316 CAGCAA-TGAAATT--TTG-TC----AA-AAA----G-TT-TA-----A-A----T--C-T-----------TT-GTAATGT
i Nomascus_annamensis.k141_224620                       I 85 C 0
s Nomascus_concolor.k141_226614                              2535 42 -      5092 CAGAAC-TGACATT--TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAACGT
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_1004198                           1098 42 +      1448 CAGAAC-TGACATT--TTG-TC----AA-AAA----G-TT-AA-----A-A----T--A-T-----------TT-GAAATGT
i Nomascus_gabriellae.k141_1004198                      I 72 I 21
s Nomascus_siki_b.tarseq_80                             26287 42 -  18771707 CAGAAC-TGACATT--TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAACGT
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_1035055                                  847 42 -      3602 CAGAAC-TGACATT--TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Nomascus_siki_a.k141_1035055                            I 27 I 35
s Nyctereutes_procyonoides.CAJHUB010000786.1                32053 42 +   3668941 CAAAAC-TGACATt--ttg-tc----aa-aa----ta-at-aa-----a-a----t--t-t-----------tt-gaagttt
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65567922 42 -  95554990 TAGAAG-TGACATT--TTA-TC----AA-ACA----G-CT-AA-----A-A----T--C-T-----------TT-GAAGTTT
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            4648 42 +      6470 TAGAAG-TGACATT--TTA-TC----AA-ACA----G-CT-AA-----A-A----T--C-T-----------TT-GAAGTTT
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65670257 42 +  89412551 TAGAAG-TGACATT--TTA-TC----AA-ACA----G-CT-AA-----A-A----T--C-T-----------TT-GAAGTTT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Octodon_degus.JH651621.1                                3686803 42 +  10294119 TAGAGT-TAATATT--TTA-CC----AA-AGA----G-TT-AA-----A-A----T--C-T-----------TT-GAAGCCC
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             680482 37 -   3126709 CATAAC-tgac-------a-tc----aa-aa----ta-at-aa-----a-a----a--t-t-----------tt-gaagttt
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1080596 43 +   1425656 GAGAAT-CAACATT--TTC-TC----AA-AA-----A--G-AT-----A-A----C--A-T--G---TT---TT-TAGGTTT
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         37884 44 +     78940 GAGAAT-CAACATT--TTC-TC----AA-AA-----A--G-GT-----A-A----C--A-TTT----TT---TT-TAGGTTT
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Orcinus_orca.KB316965.1                                 7225613 42 -   7562323 TGGAAT-caacatt--ttc-tc----aa-aa-----agat-aA-----C-A----C--T-T-----------TT-CAGGTTT
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              60873 24 -     66828 TAGAAT-TGACTTT--TAA-TC----AA-AAA----T---------------------------------------------
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 I 1
s Oryctolagus_cuniculus.CM000803.1                      141877273 31 + 163896628 TAGAAT-TGATATT--TTA-TC----AA-AAA----A-CT-AA-----t-t----c--------------------------
i Oryctolagus_cuniculus.CM000803.1                      C 0 I 10
s Otocyon_megalotis.JAEUCK010005121.1                      309348 42 -    505867 CAAAAT-TGACATT--ttg-tc----aa-aa----ta-at-aa-----a-a----t--t-t-----------tt-gaagttt
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        1549 42 -     53940 TAGAAT-TGACATT--TTA-TC----AA-ACA----G-CT-AA-----A-A----T--C-T-----------TT-GAAGTTT
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18009530 42 -  38779656 TAGAAT-TGACATT--TTA-TC----AA-ACA----G-CT-AA-----A-A----T--C-T-----------TT-GAAGTTT
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134078185 43 - 275406953 GAGATT-CAACATT--TTC-Tc----aa-aa-----a--g-at-----a-a----c--a-t--------ttttt-taGGCTT
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      79400 43 +    140051 GAGATT-CAACATT--TTC-TC----AA-AA-----A--G-AT-----A-A----C--A-TTT----T----TT-TAGGCTT
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  35237 42 +    295523 TAGAAT-TAACATT--TTA-TC----AA-AA-T---A-AT-AA-----A-A----T--T-T-----------TT-GAAGTTT
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3638987 42 +  18214204 CAGAAT-TGACATt--tga-tc----aa-aa----ta-at-aa-----a-a----t--t-t-----------tt-gaagttt
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5028663 42 -   6340057 TAGAAT-Taacatt--tta-tc----aa-aa----ta-at-aa-----a-a----t--t-t-----------tt-gaagttt
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1067034 43 -   1292953 GAGATT-CAACATT--TTC-tc----aa-aa-----a--g-at-----a-a----c--a-t--------ttttt-taGGTTT
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188157603 36 - 188283584 CAGAAT-T--------Ttg-tc----aa-aaa----g-tt-aa-----a-a----t--c-t-----------tt-gaaatgt
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                               695 36 +     25005 CAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47514980 36 +  47705337 CAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 68970 36 -    104429 CAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    7499 36 +     14967 CAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 3364 36 -      7628 CAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    116722 41 -    135482 AAGAAT-TGATGTT--TAA-TC----A--AA-T---A-AT-AA-----A-A----T--T-T-----------TT-GAAGTTT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           6234 42 -     23713 TAGAAT-TGACATT--TTA-TC----AG-ACA----G-CT-AC-----A-A----T--C-T-----------TT-GAAGTTT
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            25548 42 -     27972 TAGAAT-TGACATT--TTA-TC----AG-ACA----G-CT-AC-----A-A----T--C-T-----------TT-GAAGTTT
i Perodicticus_potto.k141_713187                        C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    14535 42 -     36578 TACAGT-TAACACT--TTA-TA----AA-AGA----A-TT-AA-----A-A----A--C-T-----------TT-TGTATCC
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_648925              217 42 -       346 TGGAAT-CAACATT--TTC-TC----AA-AA-----AGAT-AA-----C-A----C--T-T-----------TT-CAGGTTT
i Phocoena_phocoena.PhoPho_flattened_line_648925        C 0 C 0
s Piliocolobus_badius.k141_1987485                           3377 36 -      5908 TAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       3995 36 -     17985 TAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            3362 36 +      7694 TAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26741846 36 +  26888534 TAGAAT-T--------Ttg-tc----aa-aaa----g-tt-aa-----a-a----t--c-t-----------tt-gaaatgt
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pithecia_albicans.k141_991845                             44784 42 -     61926 CAGCAC-TGATATT--TTG-TT----AA-AAA----G-TT-AA-----A-A----T--G-T-----------TT-GAAATGT
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        26167 42 +     78826 CAGCAC-TGATATT--TTG-TT----AA-AAA----G-TT-AA-----A-A----T--G-T-----------TT-GAAATGT
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                             10215 42 -     15800 CAGCAC-TGATATT--TTG-TT----AA-AAA----G-TT-AA-----A-A----T--G-T-----------TT-GAAATGT
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        13414 42 -     16101 CAGCAC-TGATATT--TTG-TT----AA-AAA----G-TT-AA-----A-A----T--G-T-----------TT-GAAATGT
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          6643 42 +      9673 CAGCAC-TGATATT--TTG-TT----AA-AAA----G-TT-AA-----A-A----T--G-T-----------TT-GAAATGT
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13475643 42 -  19735023 CAGCAC-TGATATT--TTG-TT----AA-AAA----G-TT-AA-----A-A----T--G-T-----------TT-GAAATGT
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           14546 42 -     31692 CAGCAC-TGATATT--TTG-TT----AA-AAA----G-TT-AA-----A-A----T--G-T-----------TT-GAAATGT
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           6534 42 +     21690 TGGAAT-CAACATT--TTC-TC----AA-AA-----AGAT-AA-----C-A----C--T-T-----------TT-CAGGTCT
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       23882 42 +     44506 AAGAAT-TGATATT--TTG-TC----AA-AAA----G-TT-AA-----A-A----T--G-T-----------TT-GAAATGT
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        24094 43 +     67491 AAGAAT-TGATATT--TTG-TC----AA-AAA---AG-TT-AA-----A-A----T--G-T-----------TT-GAAATGT
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      14334 42 -     98129 AAGAAT-TGATATT--TTG-TC----AA-AAA----G-TT-AA-----A-A----T--G-T-----------TT-GAAATGT
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     23934 42 +    147771 AAGAAT-TGATATT--TTG-TC----AA-AAA----G-TT-AA-----A-A----T--G-T-----------TT-GAAATGT
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                          570 42 -     43940 AAGAAT-TGATATT--TTG-TC----AA-AAA----G-TT-AA-----A-A----T--G-T-----------TT-GAAATGT
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          4653 42 -     55515 AAGAAT-TGATATT--TTG-TC----AA-AAA----G-TT-AA-----A-A----T--G-T-----------TT-GAAATGT
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         24007 42 +    152463 AAGAAT-TGATATT--TTG-TC----AA-AAA----G-TT-AA-----A-A----T--G-T-----------TT-GAAATGT
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       1724 42 -    119457 AAGAAT-TGATATT--TTG-TC----AA-AAA----G-TT-AA-----A-A----T--G-T-----------TT-GAAATGT
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         13730 42 +    134592 AAGAAT-TGATATT--TTG-TC----AA-AAA----G-TT-AA-----A-A----T--G-T-----------TT-GAAATGT
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          24317 42 -     75465 AAGAAT-TGATATT--TTG-TC----AA-AAA----G-TT-AA-----A-A----T--G-T-----------TT-GAAATGT
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              188481 42 -    373494 CAGAAT-TGACATt--ttg-tc----aa-aaa----g-tt-aa-----a-a----t--c-t-----------tt-gaaatgt
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19809128 42 +  19899266 CAGAAT-TGACATT--TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               7127 36 -     15069 CAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              7242 36 +     14865 CAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6849399 46 +  12164890 TAGAAT-TGACATT--TTa-tc----aa-agatttta-tt-aa-----a-a----t--c-t-----------tt-gaaggtt
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     19566 53 -     30946 nnnnnn-nnnnnnn--nnn-nn----nn-nnn----n-nn-nn-----n-n----n--n-nnnnnnnnnnnnnn-nnnnnnn
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         4471 53 +     11805 TAGAAT-TGACATT--TTA-TC----AA-AAA----G-TT-AA-----A-A----T--C-TTTGAAGTTTATTT-GAAGGTT
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           43819 53 +     52369 TAGAAT-TGACATT--TTA-TC----AA-AAA----G-TT-AA-----A-A----T--C-TTTGAAGTTTATTT-GAAGGTT
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         36206 53 -     44753 TAGAAT-TGACATT--TTA-TC----AA-AAA----G-TT-AA-----A-A----T--C-TTTGAAGTTTATTT-GAAGGTT
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            18129 53 +     27322 TAGAAT-TGACATT--TTA-TC----AA-AAA----G-TT-AA-----A-A----T--C-TTTGAAGTTTATTT-GAAGGTT
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       17763 53 -     53241 TAGAAT-TGACATT--TTA-TC----AA-AAA----G-TT-AA-----A-A----T--C-TTTGAAGTTTATTT-GAAGGTT
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         40027 53 -     48185 TAGAAT-TGACATT--TTA-TC----AA-AAA----G-TT-AA-----A-A----T--C-TTTGAAGTTTATTT-GAAGGTT
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Pteronotus_parnellii.KE867983.1                            5004 43 -     27784 TAGTAT-GAgcata--tta-tt----aa-aa----agatttta-----a-a----a--a-t------------t-taggttt
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        247614 41 -    344369 CAGAAT-TGACATT--TTA-TC----AA--A-T---A-AT-AA-----A-A----A--T-T-----------TT-GAAGTTC
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13246894 46 -  17261082 TAGTAT-CGACATT--tta-tc----aa-aa----ag-gt-aa-----a-aaaaaa--a-a-----------at-taggttt
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             604845 46 -   3946241 TAGTAT-CGACATT--Tta-tc----aa-aa----ag-gt-aa-----a-aaaaaa--a-a-----------at-taggttt
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131535258 42 - 161321710 cagaat-tgacatt--tta-tc----aa-aa----ta-at-aa-----a-a----t--t-t-----------tt-gaagttt
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             31230 36 +     56732 CAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6807724 36 +   6970761 CAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             7117 36 +     18040 CAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                16708 43 +     68503 GAGAAT-CAACATT--TTC-TC----AA-AA-----A--G-AT-----A-A----C--A-TTT----T----TT-TAGGTTT
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1788783 22 +   2252614 TAGTAT-CAacatt--tta-tc----aa-aa---------------------------------------------------
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 I 12
s Rhinopithecus_bieti.k119_554384                            1514 36 -     17045 CAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206379002 36 - 206558726 CAGAAT-T--------Ttg-tc----aa-aaa----g-tt-aa-----a-a----t--c-t-----------tt-gaaatgt
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44857904 36 -  45163003 CAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                20233 43 +    109198 TAGTAT-CAACATT--TTA-TC----AA-AA----AA-AT-AA-----A-A---AA--A-A-----------AT-TAGATTT
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       8860 44 +     12214 GAGATT-CAACATT--TTC-TC----AA-AA-----A--G-AT-----A-A----C--A-TTT----TT---TT-TAGGTTC
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15673731 42 -  43202129 CAAAAT-TGACATT--TTG-TC----AA-AAA----G-TT-AC-----A-A----T--G-T-----------TT-GAAATGT
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        5644 42 +     34089 CAAAAT-TGACATT--TTG-TC----AA-AAA----G-TT-AC-----A-A----T--G-T-----------TT-GAAATGT
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              5586 42 -     60842 CAAAAT-TGACATT--TTG-TC----AA-AAA----G-TT-AC-----A-A----T--G-T-----------TT-GAAATGT
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              5679 42 +     67014 CAAAAT-TGACATT--TTG-TC----AA-AAA----G-TT-AC-----A-A----T--G-T-----------TT-GAAATGT
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              5657 42 +     60816 CAAAAT-TGACATT--TTG-TC----AA-AAA----G-TT-AC-----A-A----T--G-T-----------TT-GAAATGT
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 5594 42 -     76454 CAAAAT-TGACATT--TTG-TC----AA-AAA----G-TT-AC-----A-A----T--G-T-----------TT-GAAATGT
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17342331 42 -  30362882 CAGAAC-TGACATT--TTG-TC----AA-AAA----G-TT-AA-----A-A----T--G-T-----------TT-GAAATGT
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         21692 42 -     62485 CAGAAC-TGACATT--TTG-TC----AA-AAA----G-TT-AA-----A-A----T--G-T-----------TT-GAAATGT
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   37603 42 -    114521 CAGAAC-TGACATT--TTG-TC----AA-AA-----T-GACAA-----A-A----T--G-T-----------TT-AAGATTT
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        4734 36 +     15331 CAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      10109 36 +     20762 CAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         120115 36 +    130994 CAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           38893 36 +     46263 CAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     32038 36 +     42640 CAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        15059 36 +     30600 CAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            19810 41 +    739146 TAGAAC-TGACATT--GTA-TC----AA-AA-----G-GT-AA-----A-A----T--T-T-----------TA-GAGGTTT
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17767372 28 -  27805282 TAAAAC-TGACATT--TGA-TC----AA-AA-----G-GG-TA-----A---------------------------------
i Sorex_araneus.JH798170.1                              C 0 I 12
s Spermophilus_dauricus.KZ294190.1                        2240675 42 +   2842873 tagAAT-TGACTTT--TTA-CT----AG-AAA----G-TT-AA-----A-A----t--c-t-----------tt-gaacttt
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             235988 43 -    276980 CAGAATTTGATATT--TTA-TC----AA-AA----GA-AT-AA-----A-A----A--T-T-----------TT-GAGGTTT
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            28503 42 +     62062 TTGATT-TGAAATT--TTA-TC----AC-GA-T---A-AT-AA-----A-T----T--T-T-----------TT-GAAGTTT
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189273013 40 + 218635234 TAGAAT-caacatt--ttc-tc----aa-aa-----a-g--at-----a-a----a--a-t-----------tt-taggtTC
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        16233 41 -  13920577 CA-AAC-TGACATT--TTG-TC----AA-AAA----G-TT-AA-----A-A----T--A-T-----------TT-GAAATGT
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                1201 45 +     20549 TAGAAT-CTACATT--TTA-TC----AA-AA----AGGTT-AA-----A-A----AAGA-T-----------TT-TAGCTTT
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               15627 42 +     45698 TAGAAT-TGATGTT--TTA-TC----AA-AGT----T-GT-GA-----A-G----T--T-T-----------TT-TAAGTTT
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      808055 32 +   1148477 TAGAAT-TGACATT--TTA-TC----AA-AA----AG-GT-AT-----A-A----T--T-----------------------
i Tapirus_indicus.TapInd_scaffold_176                   C 0 I 9
s Tapirus_terrestris.TapTer_scaffold_14939                  58767 42 +     99546 TAGAAT-TGACATT--TTA-TC----AA-AA----AG-GT-AT-----A-A----T--T-T-----------TT-GAGGTTT
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194009131 36 - 194193292 CAGAAT-T--------Ttg-tc----aa-aaa----g-tt-aa-----a-a----t--c-t-----------tt-gaaatgt
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             39895 43 -     47444 TACAGT-TAACATT--TTAAAG----AA-AGA----G-TT-AA-----A-A----A--C-T-----------TT-GAAGTTC
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  6437 42 +      6782 CAGAAT-TGATGTT--TTA-TC----AA-AAA----T-GT-AC-----A-C----T--T-T-----------TT-GAAGTGT
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  136984 42 -    259118 TAGTAT-GGACATT--TTA-TC----AA-AA----AGTTT-AA-----A-A----A--A-T------------T-TAGGTTT
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        28219 36 +     38948 CAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   21941 36 -     32910 CAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      3353 36 -     12939 CAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       3271 36 -     14244 CAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           44668 36 -     54611 TAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        2465 36 -     11566 CAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     4648 36 -     15592 CAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          3300 36 +     14371 CAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   1587 36 +     12481 CAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        1461 36 -     24393 CAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       6711 36 -     28054 CAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44661495 36 -  44834318 CAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       3811 36 +     13828 TAGAAT-T--------TTG-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAATGT
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   6054 42 +     90398 GAGAAT-CAACATT--ATC-TC----AA-AA-----A-AG-AT-----A-A----C--A-CT----------TT-TAGGTAT
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16086762 24 +  31416278 CAGAAT-TGACCTT--TTA-TC----AA-AAA----T---------------------------------------------
i Trichechus_manatus.JH594618.1                         C 0 I 1
s Tupaia_chinensis.KB320831.1                             2794312 41 -   3938065 GAGCAT-TAACATT--TTA-GC----AA--AA----G-TT-AA-----A-A----T--C-T-----------TT-CAAGCTT
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    6397 41 +     13056 GAACAT-TAACATT--TTA-GC----AA--AA----G-TT-AA-----A-A----T--C-T-----------TT-CAAGTTT
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69314329 42 -  96451834 TGGAAT-caacatt--ttc-tc----aa-aa-----agat-aA-----C-A----C--T-T-----------TT-CAGGTTT
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   8186 42 +     10241 CAGAGC-TGACATT--TTA-TC----AA-AA-----T-AGTAA-----A-A----T--A-T-----------TT-AAGATTT
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6515733 42 +  28682327 TAGAAT-TGAcgtt--tta-tc----aa-aa----ta-at-aa-----a-a----t--t-t-----------tt-gaagttt
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  6038 42 -     20643 TAGAAT-TGACATT--TTA-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAGGTT
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             25573 42 -     33872 TAGAAT-TGACATT--TTA-TC----AA-AAA----G-TT-AA-----A-A----T--C-T-----------TT-GAAGGTT
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1525553 43 -   2331223 TAAAAT-caacatt--ttc-tc----aa-aa-----a-gataa-----a-a----t--t-t-----------ttgtacattt
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                139448 42 -    281493 CAAAAT-TGACATT--TTG-TC----AA-AA-T---A-AT-AA-----A-A----T--T-T-----------TT-GAAGTTT
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       127791 42 -    134049 TAGAAT-TGACTTT--CTA-TT----AG-AAA----G-TT-GA-----A-A----T--C-T-----------TT-GAACTTT
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        215209 37 -    227762 CATAAT-TGAC-------A-TC----AA-AA-T---A-AC-AA-----A-A----A--T-T-----------TT-GAAGTTT
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     16751 27 -     20485 ------------------A-TG----CA-AAT----G-CT-AA-----C-C----T--C-A-----------CT-GGAGCTT
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           7821 42 -      8775 TGGAAT-CAACATT--TTC-TC----AA-AA-----AGAT-AA-----C-A----C--T-T-----------TT-CAGGTTT
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Ochotona_princeps.JH802095.1                            4996729 2205 -  23139505 I
e Perognathus_longimembris.PerPac_flattened_line_19359        892 695 +     49596 I
e Procavia_capensis.ProCapCap_scaffold_149274                2467 1156 -      9567 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Megaderma_lyra.MegLyr_scaffold_3562                       64783 239 -    234502 I
e Heterohyrax_brucei.HetBruBak_scaffold_25354               61360 1157 +     73687 I
e Echinops_telfairi.JH980316.1                           22999931  2 -  44670279 I
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1008 325 -      5782 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19677 266 -    119109 I
e Microtus_ochrogaster.CM001673.1                        22820377 122 -  98408828 I
e Tarsius_wallacei.k141_48636                               60532 3805 +     65473 I
e Tarsius_lariang.k141_609102                               27216 3812 +     42269 I
e Sigmodon_hispidus.SigHis_scaffold_11332                  100998 122 -    120886 I
e Rattus_norvegicus.chr11                                13915860 1475 +  90463843 I
e Psammomys_obesus.NESX01026517.1                           36232 122 +     77221 I
e Peromyscus_maniculatus.KI615518.1                       4951147 122 -   8017169 I
e Onychomys_torridus.OnyTor_scaffold_12578                  37821 122 +     62360 I
e Ondatra_zibethicus.OndZib_scaffold_6821                  125630 120 +    145789 I
e Nannospalax_galili.KL201303.1                            119159  6 +    362372 I
e Mus_spretus.CM004110.1                                 74333152 260 +  97876770 I
e Mus_pahari.LT608305.1                                  67556620 256 +  89017189 I
e Mus_musculus.chr16                                     75490417 259 +  98207768 I
e Mus_caroli.LT608236.1                                  70767340 259 +  92629107 I
e Mesocricetus_auratus.KB708139.1                         1047652 119 -  26018355 I
e Meriones_unguiculatus.MerUng_scaffold_52233               13942 122 +     15977 I
e Ellobius_talpinus.LOJH01090055.1                           7187 122 -      7838 I
e Ellobius_lutescens.LOEQ01003611.1                        240062 122 -    369425 I
e Dolichotis_patagonum.DolPat_scaffold_14102                36772 276 -     73477 I
e Dasyprocta_punctata.DasPun_flattened_line_634             59553 276 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                18462 277 +     26546 I
e Cricetulus_griseus.LT883672.1                          53029979 121 +  72327488 I
e Cricetomys_gambianus.CriGam_scaffold_949                 279183 147 -    399297 I
e Cephalopachus_bancanus.k141_702587                         8788 3391 +     21754 I
e Cavia_tschudii.CavTsc_scaffold_488                       177453 271 +    436027 I
e Cavia_porcellus.DS562889.1                             15799262 290 -  24440124 I
e Cavia_aperea.AVPZ01000278.1                            15787326 288 -  24422027 I
e Carlito_syrichta.NW_007248099.1                          309764 3411 +    345090 I
e Acomys_cahirinus.AcoCah_scaffold_1625                    113481 121 -    189883 I
e Pan_paniscus.CM003386.1                               127575888 480 - 205426864 I
e Pan_troglodytes.CM009241.2                            120153042 480 - 196562556 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               14926 15 +    209709 A--TT-----------T----TC-----TGTC-----C---TCAT
s Acinonyx_jubatus.LLWD01000356.1                         2034940 17 +   3721120 a--tt-----------t----tcta---tGCC-----C---TCAA
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    113602  2 -    189883 -------------------------------------------AA
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 121 I 161
s Ailuropoda_melanoleuca.LNAT01000321.1                  10658504 17 +  23371972 A--TT-----------T----TC---TATGTC-----C---TTAA
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 216 C 0
s Ailurus_fulgens.LNAC01000003.1                          7095639 17 -  16596857 A--TG-----------T----TC---TATGTC-----C---TCAA
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   18297 11 -     22067 A--TC-----------T----TT---TATAC--------------
i Allactaga_bullata.AllBul_scaffold_70162               C 0 I 2
s Allenopithecus_nigroviridis.k141_2469532                   2649 17 -     60446 A--TT-----------T----TC---TATGTC-----C---TCAT
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         3366 17 -     29318 A--TT-----------T----TC---TATGTC-----C---TCAT
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         2302 17 +     38766 A--TT-----------T----TC---TATGTC-----C---TCAT
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          3260 17 -     80423 A--TT-----------T----TC---TATGTC-----C---TCAT
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            11240 17 -     18050 A--TT-----------T----CC---TATGTC-----C---TCAA
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_1710068                                956 17 +      1555 A--TT-----------T----CC---TATGTC-----C---TCAA
i Alouatta_caraya.k141_1710068                          C 0 C 0
s Alouatta_discolor.k141_811576                             11913 17 -     21359 A--TT-----------T----CC---TATGTC-----C---TCAA
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                1536 17 +      2129 A--TT-----------T----CC---TATGTC-----C---TCAA
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_2177643                           920 17 -      1868 A--TT-----------T----CC---TATGTC-----C---TCAA
i Alouatta_macconnelli.k141_2177643                     C 0 C 0
s Alouatta_nigerrima.k141_3537692                             969 17 +      1660 A--TT-----------T----CC---TATGTC-----C---TCAA
i Alouatta_nigerrima.k141_3537692                       C 0 C 0
s Alouatta_palliata.k141_2764429                              882 17 -      1480 A--TT-----------T----CC---TATGTC-----C---TCAA
i Alouatta_palliata.k141_2764429                        C 0 C 0
s Alouatta_puruensis.k141_131505                              176 17 +      4855 A--TT-----------T----CC---TAGGTC-----C---TCAA
i Alouatta_puruensis.k141_131505                        C 0 C 0
s Alouatta_seniculus.k141_1531728                            1097 17 -      1692 A--TT-----------T----CC---TATGTC-----C---TCAA
i Alouatta_seniculus.k141_1531728                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3521077 17 +   4113121 A--CT-----------T----TC---TATATC-----T---TCAA
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      391481 17 -    631301 A--TT-----------T----TC---TATGTC-----C---TCAA
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            31662 17 +     33004 A--CT-----------T----TC---TATATC-----T---TCAA
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 63587 17 +     78111 A--TT-----------T----CC---TATGTC-----C---TCAA
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            6529 17 +     22701 A--TT-----------T----CC---TATGTC-----C---TCAA
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5750486 17 +   9889416 a--TT-----------T----CC---TATGTC-----C---TCAA
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             7075 17 -    104377 A--TT-----------T----CC---TATGTC-----C---TCAA
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               7077 17 +     23246 A--TT-----------T----CC---TATGTC-----C---TCAA
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_231055                      983 17 -      2492 A--TT-----------T----TC---TATGTA-----C---TTAA
i Aplodontia_rufa.AprRuf_scaffold_231055                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        1869 28 +      9265 A--TTTGAAGGTTATTT----TC---TGTTTC-----T---TCAA
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 9898 17 -     29036 A--TT-----------T----TC---TATGTC-----C---TCAA
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9540351 17 +  39197703 A--TT-----------T----CC---TATGTC-----C---TCAA
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             61622 17 +     85812 A--TT-----------T----CC---TATGTC-----C---TCAA
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                12635 17 +     89302 A--TT-----------T----CC---TATGTC-----C---TCAA
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             17138 17 -     58268 A--TT-----------T----CC---TATGTC-----C---TCAA
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             65130 17 +    119057 A--TT-----------T----CC---TATGTC-----C---TCAA
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               7101 17 -     25888 A--TT-----------T----CC---TATGTC-----C---TCAA
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 7616 17 -     16375 A--TT-----------T----TC---TATTTC-----C---TCAA
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               1232 17 +      6337 A--TT-----------T----TC---TATTTC-----C---TCAA
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26381140 17 +  51448160 A--TT-----------T----TC---TATGTC-----C---TCAA
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        6312 17 -     13118 A--TT-----------T----TC---TATGTC-----C---TCAA
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   44183 17 -     72089 A--CT-----------T----TC---TATATC-----T---TCAA
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6560806 17 +   6870073 A--CT-----------T----TC---TATATC-----T---TCAA
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138140921 17 - 161108492 A--CT-----------T----TC---TATATC-----T---TCAA
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     573462 17 -    998990 A--CT-----------T----TC---TATATC-----T---TCAA
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136296654 17 - 158972876 A--CT-----------T----TC---TATATC-----T---TCAA
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1233735 17 -   1914593 A--CT-----------T----TC---TATATC-----T---TCAA
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               114988 17 -    171031 A--TT-----------T----CC---TATGTC-----C---TCAA
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 14017 17 +    125063 A--TT-----------T----CC---TATGTC-----C---TCAA
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                16060 17 -    216513 A--TT-----------T----CC---TATGTC-----C---TCAA
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        8603 17 -    134917 A--TT-----------T----CC---TATGTC-----C---TCAA
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3220491 17 -   8989139 a--tt-----------a----tcta---TGTC-----C---TCAA
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           398192 17 -  15254737 a--tt-----------a----tcta---TGTC-----C---TCAA
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2973928 17 +   6889770 a--tt-----------a----tcta---TGTC-----C---TCAA
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11520653 17 +  39901454 A--TC-----------T----TC---TATGTC-----A---TCAA
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   15678 17 +     87036 A--TC-----------T----TC---TATGTC-----A---TCAA
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11267322 17 -  35597290 A--TC-----------T----TC---TATGTC-----A---TCAA
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11089855 17 +  39895921 A--TC-----------T----TC---TATGTC-----A---TCAA
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16456868 17 -  44759192 A--TC-----------T----TC---TATGTC-----A---TCAA
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21326148 17 + 157394656 A--CT-----------T----TC---TATATC-----T---TCAA
i Capra_aegagrus.CM003214.1                             I 17 C 0
s Capra_hircus.CM004562.1                               135707376 17 - 157403528 A--CT-----------T----TC---TATATC-----T---TCAA
i Capra_hircus.CM004562.1                               I 17 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               60688 17 +     67245 A--TT-----------T----TC---TATGTC-----C---TCAA
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   32052 15 +     33760 A--TT-----------T----TC----T-GTC-----T---TCAA
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   159822 17 -    276539 A--TT-----------T----CC---TATGTC-----C---TGAA
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18891828 17 -  29618158 A--TT-----------T----CC---TATGTC-----C---TCAA
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 9372 17 -     26817 A--TT-----------T----CC---TATGTC-----C---TCAA
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                13615 17 +     25043 A--TT-----------T----CC---TATGTC-----C---TCAA
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4364857 16 +   7569818 a--tt-----------t----t-ta---tgtc-----c---ttAA
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         4614 16 -      9338 A--TT-----------T----T----TATGTC-----C---TTAA
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6556596 17 +   6739814 a--tt-----------t----tcta---tgtc-----c---tcat
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      28070 17 +     60454 A--TT-----------T----TC---TATGTC-----C---TCAT
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          3277 17 -     21101 A--TT-----------T----TC---TATGTC-----C---TCAT
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         60587 17 -    107033 A--TT-----------T----TC---TATGTC-----C---TCAT
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        3466 17 -     17608 A--TT-----------T----TC---TATGTC-----C---TCAT
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                           625 17 +     45019 A--TT-----------T----TC---TATGTC-----C---TCAT
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                            709 17 +     15177 A--TT-----------T----TC---TATGTC-----C---TCAT
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          3509 17 +     16677 A--TT-----------T----TC---TATGTC-----C---TCAT
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           25678 17 +     35983 A--TT-----------T----TC---TATGTC-----C---TCAT
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11992207 17 +  12117833 A--TT-----------T----TC---TATGTC-----C---TCAT
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46478964 17 +  46592721 A--TT-----------T----TC---TATGTC-----C---TCAT
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      42519 17 -     45581 A--TA-----------T----TC---TATGTC-----C---TCAT
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       3521 17 +     35577 A--TT-----------T----TC---TATGTC-----C---TCAT
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        3294 17 -     25661 A--TT-----------T----TC---TATGTC-----C---TCAT
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        3274 17 -     17744 A--TT-----------T----TC---TATGTC-----C---TCAT
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        22879 17 +     37128 A--TT-----------T----TC---TATGTC-----C---TCAT
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           59891 17 -     68416 A--TT-----------T----TC---TGTTTC-----C---TCAA
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            8939 17 +     13308 A--TT-----------T----TC---TGTTTC-----C---TCAA
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             6645 17 -     18223 A--TT-----------T----CC---TATGTC-----C---TCAA
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             23663 17 +     25473 A--TT-----------T----CC---TATGTC-----C---TCAA
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           42703 17 +     57117 A--TT-----------T----CC---TATGTC-----C---TCAA
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          47382 17 +     54541 A--TT-----------T----CC---TATGTC-----C---TCAA
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15962663 17 +  43084221 A--TT-----------T----TC---TATGTC-----A---TCTG
i Chinchilla_lanigera.JH721867.1                        I 8 C 0
s Chiropotes_israelita.k141_1189915                         72189 17 +    196370 A--TT-----------T----CC---TATGTC-----C---TCAA
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          16369 17 +     40510 A--TT-----------T----CC---TATGTC-----C---TCAA
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15140876 17 -  15256731 A--TT-----------T----TC---TATGTC-----C---TCAT
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      35485 17 -     53260 A--TT-----------T----TC---TATGTC-----C---TCAT
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101146044 17 + 101219884 a--tt-----------t----tcta---tgtc-----c---tcat
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                17457 17 -     21363 G--TT-----------T----TC---TATGTT-----T---TCAA
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           762762 17 +    964067 G--TT-----------T----TC---TATGTT-----T---TCAA
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10888036 17 +  10971483 N--NN-----------N----NN---NNTGTC-----C---TCAT
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147665964 17 + 156195979 A--TT-----------T----TC---TATGTC-----C---TCAT
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            17947 17 +     23629 A--TT-----------T----TC---TATGTC-----C---TCAT
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60620516 20 +  78930452 a--tt-----------t----ctcaaCCATCT-----C---CAAA
i Condylura_cristata.JH655880.1                         C 0 C 0
s Cricetulus_griseus.LT883672.1                          53030100  2 +  72327488 -------------------------------------------AA
i Cricetulus_griseus.LT883672.1                         I 121 I 3
s Crocidura_indochinensis.CroInd_scaffold_848148              496 17 +      1327 A--TT-----------T----TC---TTTGCC-----T---TCAA
i Crocidura_indochinensis.CroInd_scaffold_848148        I 18 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            52992 17 -     70449 A--TT-----------T----TC---TATGTC-----C---TCAA
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  209401 17 -    956709 A--TA-----------T----TC---TATGtt-----t---tcag
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 32021 17 -     67205 A--TT-----------G----TC---TATGCC-----A---TCTT
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16845751 17 +  31942871 A--TT-----------T----TC---TATTTC-----C---TCAA
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80037768 17 -  96802777 A--TT-----------T----TC---TATGTC-----C---TCAA
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18699974 17 -  18957592 A--TT-----------T----TC---TATGTC-----C---TCAA
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 323509 16 +    993696 a--tt-----------t----t-ta---tgtc-----c---tTAA
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   4161 16 +    151128 A--TT-----------T----T----TATGTC-----C---TTAA
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   157862 17 +    228994 C--CT-----------T----TC---TATGTC-----A---TCTG
i Dinomys_branickii.DinBra_scaffold_1996                I 8 C 0
s Dipodomys_ordii.KN672545.1                              3657324 17 +   4240102 A--CT-----------T----TT---AATGTC-----C---TTGA
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_285155                  252 17 -       736 a--ct-----------t----tt-aa--tgtc-----c---ttga
i Dipodomys_stephensi.DipSte_scaffold_285155            C 0 C 0
s Eidolon_helvum.KE772537.1                                 13217 17 +     24177 a--tt-----------A----CC---TATGTT-----C---TCAA
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1492421 17 +   1727528 A--CT-----------T----TC---TACATC-----T---TCAA
i Elaphurus_davidianus.JRFZ01086400.1                   I 43 C 0
s Elephantulus_edwardii.JH947210.1                        7829663 17 +  15467074 A--AC-----------t----gtta---ttta-----t---tttg
i Elephantulus_edwardii.JH947210.1                      I 1 C 0
s Ellobius_lutescens.LOEQ01003611.1                        240184  2 -    369425 -------------------------------------------GA
i Ellobius_lutescens.LOEQ01003611.1                     I 122 I 131
s Ellobius_talpinus.LOJH01090055.1                           7309  2 -      7838 -------------------------------------------GA
i Ellobius_talpinus.LOJH01090055.1                      I 122 I 132
s Enhydra_lutris.KZ291749.1                              85873161 17 +  99434291 A--TT-----------T----TC---TATGTC-----C---TCAA
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4707911 17 +   6522550 a--tt-----------t----tc---tctgtc-----C---TCAA
i Eptesicus_fuscus.JH977687.1                           I 6 C 0
s Equus_asinus.JREZ01000062.1                             5854146 17 -   7175178 A--TT-----------T----TC---TACGTC-----C---TTAA
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13352646 17 +  41866177 A--TT-----------T----TC---TACGTC-----C---TTAA
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          14136 17 +     92910 A--TT-----------T----TC---TACGTC-----C---TTAA
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erythrocebus_patas.Contig8                             48778055 17 -  48907691 A--TT-----------T----TC---TATGTC-----G---TCAT
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          315980 17 +    330699 A--TT-----------T----TC---TATGTC-----C---TCAA
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             62436 17 +     89355 A--TT-----------T----TC---TATGTC-----C---TCAA
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              5926 17 +     13586 A--TT-----------T----TC---TATTTC-----T---TCAA
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               5858 17 -      6809 A--TT-----------T----TC---TATTTC-----T---TCAA
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            12332 17 +     36558 A--TT-----------T----TC---TATTTC-----T---TCAA
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             8653 17 +     60246 A--TT-----------T----TC---TATTTC-----C---TCAA
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                12131 17 +    109717 A--TT-----------T----TC---TATTTC-----T---TCAA
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                  116 17 -     19505 A--TT-----------T----TC---TATTTC-----C---TCAA
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                16791 17 +     27497 A--TT-----------T----TC---TATTTC-----T---TAAA
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           19247 17 +     26808 A--TT-----------T----TC---TATTTC-----C---TCAA
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                33985 17 +     46535 A--TT-----------T----TC---TATTTC-----T---TCAA
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              16711 17 -     29447 A--TT-----------T----TC---TATTTC-----T---TCAA
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129893912 17 - 159252932 a--tt-----------t----tcta---tGCC-----C---TCAA
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129280996 17 - 158578461 a--tt-----------t----tcta---tGCC-----C---TCAA
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 22136 17 +     52776 A--TT-----------T----TC---TATGCC-----C---TCAA
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13892332 16 -  19261668 a--tt-----------t----tcta---t-tc-----a---tttg
i Fukomys_damarensis.KN123630.1                         I 17 C 0
s Galago_moholi.ctg555                                     211776 27 -    847004 A---TTGAAGGTTATTT----TC---TATTTC-----T---TCAA
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           14150 27 -     43889 A---TTGAAGGTTATTT----TC---TATTTC-----T---TCAA
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          11216 28 +     27357 A--TTTGAAGGTTATTT----TC---TAGTTC-----T---TCAA
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               157258 17 +    324696 A--TT-----------T----TT---TGTGTC-----C---TCAA
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    182198 21 -    189561 a--ct-----------ttCTTTC---TATATC-----T---TCAA
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           14722 17 -     18683 A--TT-----------T----TC---TATGTC-----C---TCAA
i Glis_glis.GliGli_scaffold_79770                       I 12 C 0
s Gorilla_beringei.k141_111300                               6639 15 -     14630 A--TT-----------T----TC-----TGTC-----C---TCAT
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119653739 15 - 195582420 a--tt-----------t----tc-----tgtc-----C---TCAT
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   78141 15 +    118900 A--TT-----------T----TC----T-GTC-----T---TCAA
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         2716 17 +     10286 A--TT-----------T----TC---TACTTC-----C---TCAA
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             1196 17 -     11661 A--TT-----------T----TC---TATTTC-----C---TCAA
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             6522 17 +     56096 A--TT-----------T----TC---TATTTC-----C---TCAA
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        29771 17 -     42470 A--TT-----------T----TC---TATTTC-----C---TCAA
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        46399 17 -     54384 A--TT-----------T----TC---TATTTC-----C---TCAA
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              18188 16 +     53719 A--TT-----------T----TC---TATTTC-----C---TCA-
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                28437 17 -     91191 A--CT-----------T----TC---TATATC-----T---ACAA
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2552054 17 +  31725842 a--tt-----------t----tc---tgtatc-----a---tttg
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              148074 17 +    277961 A--TT-----------T----TC---TATGTC-----C---TCAA
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      279374 16 -    477199 g--tt-----------T----TC---TATGCC-----C---TTA-
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_345408               372 16 -       919 G--TT-----------T----TC---TATGCC-----C---TTA-
i Hipposideros_galeritus.HipGal_scaffold_345408         I 42 C 0
s Hoolock_leuconedys.ctg79                                      6326 17 -   7690867 A--TT-----------T----TC---TATGTC-----C---TCAT
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 18258 17 -     67322 G--TA-----------T----TC---TATGAC-----T---TCAA
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hylobates_abbotti.k141_164775                              1107 17 -      2073 A--TT-----------T----TC---TATGTC-----C---TCAT
i Hylobates_abbotti.k141_164775                         C 0 C 0
s Hylobates_agilis.k141_1362131                               118 17 +      1075 A--TT-----------T----TC---TATGTC-----C---TCAT
i Hylobates_agilis.k141_1362131                         I 42 C 0
s Hylobates_klossii.k141_183401                               662 17 -      1272 A--TT-----------T----TC---TATGTC-----C---TCAT
i Hylobates_klossii.k141_183401                         I 42 C 0
s Hylobates_pileatus_b.ContigUN                                 14626015 17 -  25970782 A--TT-----------T----TC---TATGTC-----C---TCAT
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_950183                              710 17 +      2027 A--TT-----------T----TC---TATGTC-----C---TCAT
i Hylobates_muelleri.k141_950183                        C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             35175 17 -     60944 A--TT-----------T----TC---TATGTC-----C---TCAT
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     7120 17 +     22540 A--TT-----------T----TC---TATGTC-----A---CCCA
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7126801 17 +  13083262 a--tt-----------t----tcta---tgtc-----C---TTAA
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_5141390                                   1249 17 -      3181 A--TT-----------T----TC---TATTTC-----C---TCAA
i Indri_indri.k141_5141390                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               9974 17 +     17520 A--TT-----------T----TC---TTTGTT-----C---TCAA
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH727545.1                                 1905 17 -      4668 A--GC-----------T----TT---CATACA-----G---TCAA
i Jaculus_jaculus.JH727545.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               24576 17 +     37189 A--TT-----------T----TC---TATGTC-----C---TCAA
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          51220 17 -    147782 A--TT-----------T----CT---TATGTC-----C---TCAA
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    4583 15 +     26176 A--TT-----------T----TC-----TGTC-----C---TCAA
i Lasiurus_borealis.LasBor_scaffold_59542               I 6 C 0
s Lemur_catta.scaffold_1                                258408074 17 - 285822530 A--TT-----------T----TC---TATTTC-----C---TCAA
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        24835 17 +     39228 A--TT-----------T----TC---TATTTC-----T---TCAA
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            54221 17 +     63517 A--TT-----------T----TC---TATTTC-----T---TCAA
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        79483 17 +    116806 A--TT-----------T----TC---TATTTC-----T---TCAA
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     32474 17 -     33031 A--TT-----------T----TC---TATTTC-----T---TCAA
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3086940 17 -   3498232 a--tC-----------T----TC---TATGTC-----C---TCAA
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    14277 17 +     22452 A--TT-----------T----TC---AATGTC-----T---TAAA
i Lepus_americanus.LepAme_scaffold_62849                I 10 C 0
s Lipotes_vexillifer.KE558548.1                            136930 17 +   3060487 a--tt-----------t----tcta---tgtc-----c---tcAA
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19249673 17 +  19376315 A--TT-----------T----TC---TATGTC-----C---TCAT
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           11510 28 +     84689 A--TTTGAAGGTTATTT----TC--TC-TTTC-----T---TCAA
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3779259 28 +   6799190 A--TTTGAAGGTTATTT----TC--TC-TTTC-----T---TCAA
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20595773 17 -  62548349 A--TC-----------T----TC---TATGCC-----A---TCTA
i Loxodonta_africana.GL010040.1                         I 1 C 0
s Lycaon_pictus.CM007556.1                               11089311 17 +  39895028 A--TC-----------T----TC---TATGTC-----A---TCAA
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             21430 17 +     74745 A--TT-----------T----TC---TATGTC-----C---TCAT
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12707890 17 +  12821369 A--TT-----------T----TC---TATGTC-----C---TCAT
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                 468 17 -     26467 A--TT-----------T----TC---TATGTC-----C---TCAT
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           48335 17 +     63263 A--TT-----------T----TC---TATGTC-----C---TCAT
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                  445 17 -     26361 A--TT-----------T----TC---TATGTC-----C---TCAT
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 3622 17 -      7381 A--TT-----------T----TC---TATGTC-----C---TCAT
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  46860 17 -     79256 A--TT-----------T----TC---TATGTC-----C---TCAT
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196036962 17 + 196197964 a--tt-----------t----tcta---tgtc-----c---tcat
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11447128 17 +  11645122 a--tt-----------t----tcta---tgtc-----c---tcat
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   5814 17 -     46448 A--TT-----------T----TC---TATGTC-----C---TCAT
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                3480 17 -     13212 A--TT-----------T----TC---TATGTC-----C---TCAT
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 17157 17 -     55006 A--TT-----------T----TC---TATGTC-----C---TCAT
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43842263 17 +  43892939 A--TT-----------T----TC---TATGTC-----C---TCAT
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               18444 17 -     24607 A--TT-----------T----TC---TATGTC-----C---TCAT
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               5811 17 -     27140 A--TT-----------T----TC---TATGTC-----C---TCAT
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                701934 16 +    802869 A--TT-----------T----TT---TATGTT-----C---TCA-
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43438845 17 -  43563597 A--TT-----------T----TC---TATGTC-----C---TCAT
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4451659 17 -   4543643 A--TT-----------T----TC---TATGTC-----C---TCAT
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            147015 17 +    252755 a--tt-----------t----tata---tgta-----t---ccaA
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             37158 17 +     58827 a--tt-----------t----tata---tgta-----t---ccaA
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36874721 17 +  64221397 a--tt-----------t----tcta---tGTC-----C---TTAA
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             1978 17 -     87323 A--TT-----------T----TC---TATGCC-----C---TCAA
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               14064  2 +     15977 -------------------------------------------AA
i Meriones_unguiculatus.MerUng_scaffold_52233           I 122 I 133
s Mesocricetus_auratus.KB708139.1                         1047771  2 -  26018355 -------------------------------------------AA
i Mesocricetus_auratus.KB708139.1                       I 119 I 136
s Mesoplodon_bidens.MesBid_scaffold_475714                     77 17 +       551 A--TT-----------T----TC---TATGTC-----C---TCAA
i Mesoplodon_bidens.MesBid_scaffold_475714              C 0 C 0
s Microcebus_murinus.CM007691.1                          16511107 17 +  47401472 a--tt-----------t----tcta---tttc-----c---tcaa
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  39263 14 -     48017 GCTTC-----------T----TA---TATGCC-------------
i Microgale_talazaci.MicTal_scaffold_34660              I 1 I 3
s Micronycteris_hirsuta.MicHir_scaffold_37978               23867 17 -     32043 A--TT-----------T----TC---TATATC-----C---TCAA
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22820499  2 -  98408828 -------------------------------------------GA
i Microtus_ochrogaster.CM001673.1                       I 122 I 132
s Miniopterus_natalensis.LDJU01000022.1                   8211944 17 +  10048721 a--tt-----------t----tcca---TGTC-----C---TCAA
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            36433 17 +     45743 A--TT-----------T----TC---CATGTC-----C---TCAA
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         3406 17 +     29742 A--TT-----------T----TC---TATGTC-----C---TCAT
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        12467 17 -    104932 A--TC-----------T----TC---TATATC-----C---TCAA
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     6496 17 +      8497 A--TT-----------T----TC---TATTTC-----C---TCAA
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 147358 17 +    154973 A--TT-----------T----TC---TATGTC-----C---TCAA
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                162401 17 +    265003 A--TT-----------T----TC---TATGTC-----C---TCAA
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  2452 17 -     19904 A--CC-----------T----TC---TATATC-----T---TCAA
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  145886 17 -    168139 A--TT-----------T----TC---TATGTC-----C---TCAC
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          23389 17 -    100666 A--CT-----------T----TC---AATTTC-----C---TCAA
i Murina_feae.MurFea_scaffold_2254                      I 17 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             13233 17 +     98495 A--CT-----------T----TG---TATATC-----A---TCAA
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4425344 17 -  28371801 a--tt-----------t----tcta---TGTT-----C---TCAA
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     91347 17 -    117718 G--TT-----------G----TC---TATGTC-----A---TCTA
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               970250 17 +   8389877 a--tt-----------t----tcta---tGTC-----C---TCAA
i Myotis_brandtii.KE161952.1                            I 6 C 0
s Myotis_davidii.KB114863.1                               5021675 17 +   6462685 a--tt-----------t----tcta---tGTC-----C---TCAA
i Myotis_davidii.KB114863.1                             I 6 C 0
s Myotis_lucifugus.GL429887.1                             3467753 17 -   3747815 a--tt-----------t----tc---tATGTC-----C---TCAA
i Myotis_lucifugus.GL429887.1                           I 6 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        12996 17 +     66751 A--TT-----------T----TC---TATGTC-----C---TCAA
i Myotis_myotis.MyoMyo_scaffold_6123                    I 6 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             6003 17 -      8794 G--TT-----------T----TC---TATTAC-----T---TCAA
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nasalis_larvatus.k141_153429                               9884 17 +     48152 A--TT-----------T----TC---TATGTC-----C---TCAT
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4485857 17 -  14209539 a--tt-----------t----tcta---tGTC-----C---TCAA
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3951970 17 -   4490290 A--TT-----------T----TC---TATGTC-----C---TCAA
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Nomascus_annamensis.k141_224620                             478 17 -      2316 T--TT-----------T----TA---TATGTT-----C---TAAT
i Nomascus_annamensis.k141_224620                       C 0 C 0
s Nomascus_concolor.k141_226614                              2577 17 -      5092 A--TT-----------T----TC---TATGTC-----C---TCAT
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_1032971                            151 17 -      1918 A--TT-----------T----TC---TATGTC-----C---TCAT
i Nomascus_gabriellae.k141_1032971                      I 42 C 0
s Nomascus_siki_b.tarseq_80                             26329 17 -  18771707 A--TT-----------T----TC---TATGTC-----C---TCAT
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  3999 17 +      4512 A--TT-----------T----TC---TATGTC-----C---TCAT
i Nomascus_siki_a.k141_595747                             I 42 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                32095 17 +   3668941 a--tC-----------T----TC---TATGTC-----A---TCAA
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65567964 28 -  95554990 A--TTTGAAAGTTATTT----TC--TC-TTTC-----T---TCAA
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            4690 28 +      6470 A--TTTGAAAGTTATTT----TC--TC-TTTC-----T---TCAA
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65670299 15 +  89412551 A--TTTGAAGGTTATTT----------------------------
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 I 11
s Octodon_degus.JH651621.1                                3686845 17 +  10294119 A--TT-----------G----TC---CGTGTC-----A---TCTG
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             680519 17 -   3126709 a--tt-----------t----tcta---tGTC-----C---TCAA
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1080639 17 +   1425656 A--CT-----------T----TC---TACATC-----T---TCAA
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         37928 17 +     78940 A--CT-----------T----TC---TATATC-----T---TCAA
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  125750  2 +    145789 -------------------------------------------GG
i Ondatra_zibethicus.OndZib_scaffold_6821               I 120 I 145
s Onychomys_torridus.OnyTor_scaffold_12578                  37943  2 +     62360 -------------------------------------------AA
i Onychomys_torridus.OnyTor_scaffold_12578              I 122 C 0
s Orcinus_orca.KB316965.1                                 7225655 17 -   7562323 A--TT-----------T----TC---TATGTC-----C---TCAA
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              60898  6 -     66828 A--CA-----------T----TC----------------------
i Orycteropus_afer.OryAfe_flattened_line_13509          I 1 I 4
s Oryctolagus_cuniculus.CM000803.1                      141877314 17 + 163896628 a--tt-----------t----ttga---tGTC-----T---TCAA
i Oryctolagus_cuniculus.CM000803.1                      I 10 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      309390 17 -    505867 A--TC-----------T----TC---TATGTC-----A---TCAA
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        1591 28 -     53940 A--TTTGAAGGTTATTT----TC---TATTTC-----T---TCAA
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18009572 28 -  38779656 A--TTTGAaggttattt----tcta---tttc-----t---tcaa
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134078228 17 - 275406953 A--CT-----------T----TC---TATATC-----T---TCAA
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      79443 17 +    140051 A--CT-----------T----TC---TATATC-----T---TCAA
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  35279 17 +    295523 A--TT-----------T----TC---TATGCC-----C---TCAA
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3639029 17 +  18214204 a--tt-----------t----tcta---tGCC-----C---TCAA
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5028705 17 -   6340057 a--tt-----------t----tcta---tGCC-----C---TCAA
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1067077 17 -   1292953 A--CT-----------T----TC---TACATC-----T---TCAA
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188157639 17 - 188283584 a--tt-----------t----tcta---tgtC-----C---TCAT
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                               731 17 +     25005 A--TT-----------T----TC---TATGTC-----C---TCAT
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47515016 17 +  47705337 A--TT-----------T----TC---TATGTC-----C---TCAT
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 69006 17 -    104429 A--TT-----------T----TC---TATGTC-----C---TCAT
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    7535 17 +     14967 A--TT-----------T----TC---TATGTC-----C---TCAT
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 3400 17 -      7628 A--TT-----------T----TC---TATGTC-----C---TCAT
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    116763 17 -    135482 A--TT-----------T----TC---TATGTC-----C---TCAA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           6276 28 -     23713 A--TTTGAAGGTTATTT----TC--TC-TTTC-----T---TCAA
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            25590 28 -     27972 A--TTTGAAGGTTATTT----TC--TC-TTTC-----T---TCAA
i Perodicticus_potto.k141_713187                        C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4951269  2 -   8017169 -------------------------------------------AC
i Peromyscus_maniculatus.KI615518.1                     I 122 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    14577 17 -     36578 A--TT-----------T----TC---TGTGTT-----A---TCTG
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_648925              259 17 -       346 A--TT-----------T----TC---TATGTC-----C---TCAA
i Phocoena_phocoena.PhoPho_flattened_line_648925        C 0 C 0
s Piliocolobus_badius.k141_1987485                           3413 17 -      5908 A--TT-----------T----TC---TATGTC-----C---TCAT
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       4031 17 -     17985 A--TT-----------T----TC---TATGTC-----C---TCAT
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            3398 17 +      7694 A--TT-----------T----TC---TATGTC-----C---TCAT
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26741882 17 +  26888534 a--tt-----------t----tcta---tgtC-----C---TCAT
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pithecia_albicans.k141_991845                             44826 17 -     61926 A--TT-----------T----CC---TATGTC-----C---TCAA
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        26209 17 +     78826 A--TT-----------T----CC---TATGTC-----C---TCAA
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                             10257 17 -     15800 A--TT-----------T----CC---TATGTC-----C---TCAA
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        13456 17 -     16101 A--TT-----------T----CC---TATGTC-----C---TCAA
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          6685 17 +      9673 A--TT-----------T----CC---TATGTC-----C---TCAA
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13475685 17 -  19735023 A--TT-----------T----CC---TATGTC-----C---TCAA
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           14588 17 -     31692 A--TT-----------T----CC---TATGTC-----C---TCAA
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           6576 17 +     21690 A--TT-----------T----TC---TATGTC-----C---TCAA
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       23924 17 +     44506 A--TT-----------T----CC---TATGTC-----C---TCAA
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        24137 17 +     67491 A--TT-----------T----CC---TATGTC-----C---TCAA
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      14376 17 -     98129 A--TT-----------T----CC---TATGTC-----C---TCAA
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     23976 17 +    147771 A--TT-----------T----CC---TATGTC-----C---TCAA
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                          612 17 -     43940 A--TT-----------T----CC---TATGTC-----C---TCAA
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          4695 17 -     55515 A--TT-----------T----CC---TATGTC-----C---TCAA
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         24049 17 +    152463 A--TT-----------T----CC---TATGTC-----C---TCAA
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       1766 17 -    119457 A--TT-----------T----CC---TATGTC-----C---TCAA
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         13772 17 +    134592 A--TT-----------T----CC---TATGTC-----C---TCAA
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          24359 17 -     75465 A--TT-----------T----CC---TATGTC-----C---TCAA
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              188523 17 -    373494 a--tt-----------t----tcta---tGTC-----C---TCAT
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19809170 17 +  19899266 A--TT-----------T----TC---TATGTC-----C---TCAT
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               7163 17 -     15069 A--TT-----------T----TC---TATGTC-----C---TCAT
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              7278 17 +     14865 A--TT-----------T----TC---TATGTC-----C---TCAT
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6849445 17 +  12164890 a--tt-----------t----tcta---tttc-----c---tcaa
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     19619 17 -     30946 n--nn-----------n----nn---nnnnnn-----n---nnnn
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         4524 17 +     11805 A--TT-----------T----TC---TATTTC-----C---TCAA
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           43872 17 +     52369 A--TT-----------T----TC---TATTTC-----C---TCAA
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         36259 17 -     44753 A--TT-----------T----TC---TATTTC-----C---TCAA
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            18182 17 +     27322 A--TT-----------T----TC---TATTTC-----C---TCAA
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       17816 17 -     53241 A--TT-----------T----TC---TATTTC-----C---TCAA
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         40080 17 -     48185 A--TT-----------T----TC---TATTTC-----C---TCAA
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           36354  2 +     77221 -------------------------------------------AA
i Psammomys_obesus.NESX01026517.1                       I 122 I 133
s Pteronotus_parnellii.KE867983.1                            5047 17 -     27784 a--TT-----------T----TC---TATGTC-----C---TCAA
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        247655 17 -    344369 A--TG-----------T----TC---TATGTC-----C---TCAA
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13246940 17 -  17261082 a--tt-----------C----CT---TATGTT-----C---TCAA
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             604891 17 -   3946241 a--tt-----------C----CT---TATGTT-----C---TCAA
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131535300 17 - 161321710 a--tt-----------t----tcta---tGCC-----C---TCAA
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             31266 17 +     56732 A--TT-----------T----TC---TATGTC-----C---TCAT
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6807760 17 +   6970761 A--TT-----------T----TC---TATGTC-----C---TCAT
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             7153 17 +     18040 A--TT-----------T----TC---TATGTC-----C---TCAT
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                16751 17 +     68503 A--CT-----------T----TC---TACATC-----T---TCAA
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1788817 16 +   2252614 a--tt-----------T----TC---TATGTC-----C---TCA-
i Rhinolophus_sinicus.LVEH01000179.1                    I 12 C 0
s Rhinopithecus_bieti.k119_554384                            1550 17 -     17045 A--TT-----------T----TC---TATGTC-----C---TCAT
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206379038 17 - 206558726 a--tt-----------t----tcta---tgtc-----c---tcat
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44857940 17 -  45163003 A--TT-----------T----TC---TATGTC-----C---TCAT
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                20276 17 +    109198 A--TT-----------C----CC---TATGTT-----C---TCAA
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       8904 17 +     12214 A--CT-----------T----TT---TATATC-----T---TCAA
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15673773 17 -  43202129 A--TT-----------T----CC---TATGTC-----C---TCGA
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        5686 17 +     34089 A--TT-----------T----CC---TATGTC-----C---TCAA
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              5628 17 -     60842 A--TT-----------T----CC---TATGTC-----C---TCAA
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              5721 17 +     67014 A--TT-----------T----CC---TATGTC-----C---TCAA
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              5699 17 +     60816 A--TT-----------T----CC---TATGTC-----C---TCAA
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 5636 17 -     76454 A--TT-----------T----CC---TATGTC-----C---TCAA
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17342373 17 -  30362882 A--TT-----------T----CC---TATGTC-----C---TCAA
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         21734 17 -     62485 A--TT-----------T----CC---TATGTC-----C---TCAA
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   37645 25 -    114521 A--TT-----------T----CTCAACCACCCCCCCCC---CCAA
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        4770 17 +     15331 A--TT-----------T----TC---TATGTC-----C---TCAT
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      10145 17 +     20762 A--TT-----------T----TC---TATGTC-----C---TCAT
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         120151 17 +    130994 A--TT-----------T----TC---TATGTC-----C---TCAT
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           38929 17 +     46263 A--TT-----------T----TC---TATGTC-----C---TCAT
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     32074 17 +     42640 A--TT-----------T----TC---TATGTC-----C---TCAT
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        15095 19 +     30600 A--TT-----------T----TC---TATGTC-----C-CCTCAT
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  101120  2 -    120886 -------------------------------------------GA
i Sigmodon_hispidus.SigHis_scaffold_11332               I 122 I 117
s Solenodon_paradoxus.SolPar_flattened_line_1012            19851 17 +    739146 A--CT-----------T----TC---TTTGTC-----C---TCAA
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17767412 20 -  27805282 A--TT-----------T----TC---TTTGCC-----TAATTTAA
i Sorex_araneus.JH798170.1                              I 12 C 0
s Spermophilus_dauricus.KZ294190.1                        2240717 17 +   2842873 a--tt-----------t----tcta---tGTC-----C---TTAA
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             236031 17 -    276980 A--TT-----------T----TC---TATGTC-----C---TCAA
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            28545 17 +     62062 A--TT-----------T----TC---TATGTC-----C---TCAC
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189273053 17 + 218635234 A--TT-----------T----GC---TATGTC-----C---TGAA
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        16274 17 -  13920577 A--TT-----------T----TC---TATGTC-----C---TCAT
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                1246 17 +     20549 A--TT-----------T----TC---TATGTC-----C---TCAA
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               15669 17 +     45698 G--TT-----------T----TC---TATTAC-----T---TCAA
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      808096 17 +   1148477 A--TA-----------T----TC---TACATC-----C---TTAA
i Tapirus_indicus.TapInd_scaffold_176                   I 9 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  58809 17 +     99546 A--TA-----------T----TC---TGCATC-----C---TTAA
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194009167 17 - 194193292 a--tt-----------t----tcta---tgtC-----C---TCAT
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             39938 11 -     47444 A--TT-----------T----TC---TATGA--------------
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  137026 17 -    259118 A--TT-----------T----TC---TATGTC-----C---TCAA
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        28255 17 +     38948 A--TT-----------T----TC---TATGTC-----C---TCAT
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   21977 17 -     32910 A--TT-----------T----TC---TATGTC-----C---TCAT
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      3389 17 -     12939 A--TT-----------T----TC---TATGTC-----C---TCAT
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       3307 17 -     14244 A--TT-----------T----TC---TATGTC-----C---TCAT
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           44704 17 -     54611 A--TT-----------T----TC---TATGTC-----C---TCAT
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        2501 17 -     11566 A--TT-----------T----TC---TATGTC-----C---TCAT
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     4684 17 -     15592 A--TT-----------T----TC---TATGTC-----C---TCAT
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          3336 17 +     14371 A--TT-----------T----TC---TATGTC-----C---TCAT
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   1623 17 +     12481 A--TT-----------T----TC---TATGTC-----C---TCAT
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        1497 17 -     24393 A--TT-----------T----TC---TATGTC-----C---TCAT
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       6747 17 -     28054 A--TT-----------T----TC---TATGTC-----C---TCAT
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44661531 17 -  44834318 A--TT-----------T----TC---TATGTC-----C---TCAT
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       3847 17 +     13828 A--TT-----------T----TC---TATGTC-----C---TCAT
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   6096 17 +     90398 A--TA-----------T----TC---TATGTC-----C---TCAA
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16086787 17 +  31416278 A--TC-----------C----TC--TC-TGCC-----A---TCAA
i Trichechus_manatus.JH594618.1                         I 1 C 0
s Tupaia_chinensis.KB320831.1                             2794353 12 -   3938065 A--TT-----------T----TC---TATATC-------------
i Tupaia_chinensis.KB320831.1                           C 0 I 2
s Tupaia_tana.TupTan_flattened_line_68454                    6438 12 +     13056 T--TT-----------T----TC---TATACC-------------
i Tupaia_tana.TupTan_flattened_line_68454               C 0 I 2
s Tursiops_truncatus.MRVK01000923.1                      69314371 17 -  96451834 A--TT-----------T----TC---TATGTC-----C---TCAA
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   8228 20 +     10241 A--TT-----------T----ACTAATCATCC-----C---CCAA
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6515775 17 +  28682327 a--tt-----------t----tcta---tGTC-----C---TTAA
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  6080 17 -     20643 A--TT-----------T----TC---TATTTC-----A---TCAA
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             25615 17 -     33872 A--TT-----------T----TC---TATTTC-----A---TCAA
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1525596 17 -   2331223 a--tt-----------a----tC---TATGTC-----C---TCAA
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                139490 17 -    281493 A--TC-----------T----TC---TATGTC-----A---TCAA
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       127833 17 -    134049 A--TT-----------T----TC---TATGTC-----C---TTAA
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        215246 17 -    227762 A--TT-----------T----TC---TATGTC-----C---TCAA
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     16778 17 -     20485 A--TC-----------T----TT---TATAGA-----G---TCAA
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           7863 17 -      8775 A--TT-----------T----TC---TATGTC-----C---TCAA
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           3741  0 -      6963 C
e Ochotona_princeps.JH802095.1                            4996729 2205 -  23139505 I
e Perognathus_longimembris.PerPac_flattened_line_19359        892 695 +     49596 I
e Tolypeutes_matacus.TolMat_scaffold_269431                  6479  0 +      6782 C
e Procavia_capensis.ProCapCap_scaffold_149274                2467 1156 -      9567 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Megaderma_lyra.MegLyr_scaffold_3562                       64783 239 -    234502 I
e Heterohyrax_brucei.HetBruBak_scaffold_25354               61360 1157 +     73687 I
e Echinops_telfairi.JH980316.1                           22999931  2 -  44670279 I
e Dasypus_novemcinctus.JH568778.1                          184585  0 -   6883506 C
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1008 325 -      5782 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19677 266 -    119109 I
e Tarsius_wallacei.k141_48636                               60532 3805 +     65473 I
e Tarsius_lariang.k141_609102                               27216 3812 +     42269 I
e Rattus_norvegicus.chr11                                13915860 1475 +  90463843 I
e Nannospalax_galili.KL201303.1                            119159  6 +    362372 I
e Mus_spretus.CM004110.1                                 74333152 260 +  97876770 I
e Mus_pahari.LT608305.1                                  67556620 256 +  89017189 I
e Mus_musculus.chr16                                     75490417 259 +  98207768 I
e Mus_caroli.LT608236.1                                  70767340 259 +  92629107 I
e Dolichotis_patagonum.DolPat_scaffold_14102                36772 276 -     73477 I
e Dasyprocta_punctata.DasPun_flattened_line_634             59553 276 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                18462 277 +     26546 I
e Cricetomys_gambianus.CriGam_scaffold_949                 279183 147 -    399297 I
e Cephalopachus_bancanus.k141_702587                         8788 3391 +     21754 I
e Cavia_tschudii.CavTsc_scaffold_488                       177453 271 +    436027 I
e Cavia_porcellus.DS562889.1                             15799262 290 -  24440124 I
e Cavia_aperea.AVPZ01000278.1                            15787326 288 -  24422027 I
e Carlito_syrichta.NW_007248099.1                          309764 3411 +    345090 I
e Pan_paniscus.CM003386.1                               127575888 480 - 205426864 I
e Pan_troglodytes.CM009241.2                            120153042 480 - 196562556 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               14941 4 +    209709 C-TTT
s Acinonyx_jubatus.LLWD01000356.1                         2034957 4 +   3721120 C-CTT
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    113765 4 -    189883 A-ATT
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 161 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10658521 4 +  23371972 T-CTT
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7095656 4 -  16596857 G-CTT
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   18310 4 -     22067 A-CTT
i Allactaga_bullata.AllBul_scaffold_70162               I 2 C 0
s Allenopithecus_nigroviridis.k141_2469532                   2666 4 -     60446 C-TTT
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         3383 4 -     29318 C-TTT
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         2319 4 +     38766 C-TTT
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          3277 4 -     80423 C-TTT
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            11257 4 -     18050 C-TTT
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_1710068                                973 4 +      1555 C-TTT
i Alouatta_caraya.k141_1710068                          C 0 C 0
s Alouatta_discolor.k141_811576                             11930 4 -     21359 C-TTT
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                1553 4 +      2129 C-TTT
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_2177643                           937 4 -      1868 C-TTT
i Alouatta_macconnelli.k141_2177643                     C 0 C 0
s Alouatta_nigerrima.k141_3537692                             986 4 +      1660 C-TTT
i Alouatta_nigerrima.k141_3537692                       C 0 C 0
s Alouatta_palliata.k141_2764429                              899 4 -      1480 C-TTT
i Alouatta_palliata.k141_2764429                        C 0 C 0
s Alouatta_puruensis.k141_131505                              193 4 +      4855 C-TTT
i Alouatta_puruensis.k141_131505                        C 0 C 0
s Alouatta_seniculus.k141_1531728                            1114 4 -      1692 C-TTT
i Alouatta_seniculus.k141_1531728                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3521094 4 +   4113121 G-CTT
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      391498 4 -    631301 C-CTT
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            31679 4 +     33004 G-CTG
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 63604 4 +     78111 C-TTT
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            6546 4 +     22701 C-TTT
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5750503 4 +   9889416 C-TTT
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             7092 4 -    104377 C-TTT
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               7094 4 +     23246 C-TTT
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_231055                     1000 4 -      2492 A-CTT
i Aplodontia_rufa.AprRuf_scaffold_231055                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        1897 4 +      9265 C-CTT
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 9915 4 -     29036 C-CTC
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9540368 4 +  39197703 C-TTT
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             61639 4 +     85812 C-TTT
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                12652 4 +     89302 C-TTT
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             17155 4 -     58268 C-TTT
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             65147 4 +    119057 C-TTT
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               7118 4 -     25888 C-TTT
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 7633 4 -     16375 C-CTT
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               1249 4 +      6337 C-CTT
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26381157 4 +  51448160 G-CTT
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        6329 4 -     13118 G-CTT
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   44200 4 -     72089 G-CTT
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6560823 4 +   6870073 G-CTT
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138140938 4 - 161108492 G-CTT
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     573479 4 -    998990 G-CTT
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136296671 4 - 158972876 G-CTT
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1233752 4 -   1914593 G-CTT
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               115005 4 -    171031 C-TTT
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 14034 4 +    125063 C-TTT
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                16077 4 -    216513 C-TTT
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        8620 4 -    134917 C-TTT
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3220508 4 -   8989139 C-CTT
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           398209 4 -  15254737 C-CTT
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2973945 4 +   6889770 C-CTT
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11520670 4 +  39901454 C-CCT
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   15695 4 +     87036 C-CCT
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11267339 4 -  35597290 C-CCT
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11089872 4 +  39895921 C-CCT
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16456885 4 -  44759192 C-CCT
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21326165 4 + 157394656 G-CTT
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135707393 4 - 157403528 G-CTT
i Capra_hircus.CM004562.1                               C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               60705 4 +     67245 C-CTT
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   32067 4 +     33760 A-CTT
i Castor_canadensis.CasCan_scaffold_47037               C 0 I 2
s Catagonus_wagneri.CatWag_scaffold_1305                   159839 4 -    276539 T-CTT
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18891845 4 -  29618158 C-TTT
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 9389 4 -     26817 C-TTT
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                13632 4 +     25043 C-TTT
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4364873 4 +   7569818 C-CTT
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         4630 4 -      9338 C-CTT
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6556613 4 +   6739814 c-ttt
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      28087 4 +     60454 C-TTT
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          3294 4 -     21101 C-TTT
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         60604 4 -    107033 C-TTT
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        3483 4 -     17608 C-TTT
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                           642 4 +     45019 C-TTT
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                            726 4 +     15177 C-TTT
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          3526 4 +     16677 C-TTT
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           25695 4 +     35983 C-TTT
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11992224 4 +  12117833 C-TTT
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46478981 4 +  46592721 C-TTT
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      42536 4 -     45581 C-TTT
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       3538 4 +     35577 C-TTT
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        3311 4 -     25661 C-TTT
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        3291 4 -     17744 C-TTT
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        22896 4 +     37128 C-TTT
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           59908 4 -     68416 C-CTT
i Cheirogaleus_major.k141_1157592                       C 0 I 4
s Cheirogaleus_medius.k141_133808                            8956 4 +     13308 C-CTT
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             6662 4 -     18223 C-TTT
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             23680 4 +     25473 C-TTT
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           42720 4 +     57117 C-TTT
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          47399 4 +     54541 C-TTT
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15962680 4 +  43084221 A-ctt
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         72206 4 +    196370 C-TTT
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          16386 4 +     40510 C-TTT
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15140893 4 -  15256731 C-TTT
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      35502 4 -     53260 C-TTT
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101146061 4 + 101219884 c-ttt
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                17474 4 -     21363 C-CCT
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           762779 4 +    964067 T-CCT
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10888053 4 +  10971483 C-TTT
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147665981 4 + 156195979 C-TTT
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            17964 4 +     23629 C-TTT
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60620536 4 +  78930452 T-TCT
i Condylura_cristata.JH655880.1                         C 0 C 0
s Cricetulus_griseus.LT883672.1                          53030105 1 +  72327488 ----T
i Cricetulus_griseus.LT883672.1                         I 3 C 0
s Crocidura_indochinensis.CroInd_scaffold_848148              513 4 +      1327 A-CTT
i Crocidura_indochinensis.CroInd_scaffold_848148        C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            53009 4 -     70449 C-CTT
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  209418 4 -    956709 a-ctt
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 32038 4 -     67205 T-CTT
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16845768 4 +  31942871 C-CTT
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80037785 4 -  96802777 G-CTT
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18699991 4 -  18957592 C-CTT
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 323525 4 +    993696 C-CTT
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   4177 4 +    151128 C-CTT
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   157879 4 +    228994 A-CTT
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3657341 4 +   4240102 A-TTA
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_285155                  269 4 -       736 a-tta
i Dipodomys_stephensi.DipSte_scaffold_285155            C 0 I 12
s Eidolon_helvum.KE772537.1                                 13234 4 +     24177 C-CTT
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1492438 4 +   1727528 G-CTT
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7829680 4 +  15467074 t-ctt
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           7443 4 -      7838 a-ctt
i Ellobius_talpinus.LOJH01090055.1                      I 132 C 0
s Enhydra_lutris.KZ291749.1                              85873178 4 +  99434291 G-CTT
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4707928 4 +   6522550 C-CTT
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5854163 4 -   7175178 C-CTT
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13352663 4 +  41866177 C-CTT
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          14153 4 +     92910 C-CTT
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erythrocebus_patas.Contig8                             48778072 4 -  48907691 C-TTT
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          315997 4 +    330699 G-CTT
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             62453 4 +     89355 G-CTT
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              5943 4 +     13586 C-CTT
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               5875 4 -      6809 C-CTT
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            12349 4 +     36558 C-CTT
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             8670 4 +     60246 T-CTT
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                12148 4 +    109717 C-CTT
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                  133 4 -     19505 C-CTT
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                16808 4 +     27497 C-CTT
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           19264 4 +     26808 C-CTT
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                34002 4 +     46535 C-CTT
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              16728 4 -     29447 C-CTT
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129893929 4 - 159252932 C-CTT
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129281013 4 - 158578461 C-CTT
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 22153 4 +     52776 C-CTT
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13892348 4 -  19261668 a-CTT
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     211803 4 -    847004 A-CTT
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           14177 4 -     43889 A-CTT
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          11244 4 +     27357 A-CTT
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               157275 4 +    324696 T-CTT
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    182219 4 -    189561 G-CTT
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           14739 4 -     18683 A-CTT
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               6654 4 -     14630 C-TTT
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119653754 4 - 195582420 C-TTT
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   78156 4 +    118900 A-CTG
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 I 1
s Hapalemur_alaotrensis.k141_1280836                         2733 4 +     10286 C-CTT
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             1213 4 -     11661 C-CTT
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             6539 4 +     56096 C-CTT
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        29788 4 -     42470 C-CTT
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        46416 4 -     54384 C-CTT
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              18204 4 +     53719 C-CTT
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                28454 4 -     91191 G-CTT
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2552071 4 +  31725842 a-CTT
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              148091 4 +    277961 G-CTT
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      279390 5 -    477199 CCCTT
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_345408               388 5 -       919 CCCTT
i Hipposideros_galeritus.HipGal_scaffold_345408         C 0 C 0
s Hoolock_leuconedys.ctg79                                      6343 4 -   7690867 C-TTT
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 18275 4 -     67322 T-CTT
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hylobates_abbotti.k141_164775                              1124 4 -      2073 C-TTT
i Hylobates_abbotti.k141_164775                         C 0 C 0
s Hylobates_agilis.k141_1362131                               135 4 +      1075 C-TTT
i Hylobates_agilis.k141_1362131                         C 0 I 38
s Hylobates_klossii.k141_183401                               679 4 -      1272 C-TTT
i Hylobates_klossii.k141_183401                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14626032 4 -  25970782 C-TTT
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_950183                              727 4 +      2027 C-TTT
i Hylobates_muelleri.k141_950183                        C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             35192 4 -     60944 C-TTT
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     7137 4 +     22540 A-CTT
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7126818 4 +  13083262 A-TTT
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_5141390                                   1266 4 -      3181 C-CTT
i Indri_indri.k141_5141390                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725               9991 4 +     17520 G-CTT
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH727545.1                                 1922 4 -      4668 A-CTT
i Jaculus_jaculus.JH727545.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               24593 4 +     37189 G-CTT
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          51237 4 -    147782 C-TTT
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    4598 4 +     26176 C-CTT
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258408091 4 - 285822530 C-CTT
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        24852 4 +     39228 C-CTC
i Lepilemur_ankaranensis.k141_884009                    C 0 I 1
s Lepilemur_dorsalis.k141_134267                            54238 4 +     63517 C-CTC
i Lepilemur_dorsalis.k141_134267                        C 0 I 1
s Lepilemur_ruficaudatus.k141_617879                        79500 4 +    116806 C-CAC
i Lepilemur_ruficaudatus.k141_617879                    C 0 I 1
s Lepilemur_septentrionalis.k141_578524                     32491 4 -     33031 C-CTC
i Lepilemur_septentrionalis.k141_578524                 C 0 I 1
s Leptonychotes_weddellii.KB714749.1                      3086957 4 -   3498232 T-CTT
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    14294 4 +     22452 A-TTT
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            136947 4 +   3060487 G-CTT
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19249690 4 +  19376315 C-TTT
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           11538 4 +     84689 C-CTT
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3779287 4 +   6799190 C-CTT
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20595790 4 -  62548349 C-CTT
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11089328 4 +  39895028 C-CCT
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             21447 4 +     74745 C-TTT
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12707907 4 +  12821369 C-TTT
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                 485 4 -     26467 C-TTT
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           48352 4 +     63263 G-TTT
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                  462 4 -     26361 C-TTT
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 3639 4 -      7381 C-TTT
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  46877 4 -     79256 C-TTT
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196036979 4 + 196197964 c-ttt
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11447145 4 +  11645122 c-ttt
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   5831 4 -     46448 C-TTT
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                3497 4 -     13212 C-TTT
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 17174 4 -     55006 C-TTT
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43842280 4 +  43892939 C-TTT
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               18461 4 -     24607 C-TTT
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               5828 4 -     27140 C-TTT
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                701950 4 +    802869 C-CTT
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43438862 4 -  43563597 C-TTT
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4451676 4 -   4543643 C-TTT
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            147032 4 +    252755 C-CTT
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             37175 4 +     58827 C-CTT
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36874738 4 +  64221397 A-CTT
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             1995 4 -     87323 G-CTT
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               14199 4 +     15977 A-CTT
i Meriones_unguiculatus.MerUng_scaffold_52233           I 133 C 0
s Mesocricetus_auratus.KB708139.1                         1047909 4 -  26018355 A-ATT
i Mesocricetus_auratus.KB708139.1                       I 136 C 0
s Mesoplodon_bidens.MesBid_scaffold_475714                     94 4 +       551 G-CTT
i Mesoplodon_bidens.MesBid_scaffold_475714              C 0 C 0
s Microcebus_murinus.CM007691.1                          16511124 4 +  47401472 c-CTT
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  39280 4 -     48017 T-CTT
i Microgale_talazaci.MicTal_scaffold_34660              I 3 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               23884 4 -     32043 C-CTT
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22820633 4 -  98408828 A-CTT
i Microtus_ochrogaster.CM001673.1                       I 132 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8211961 4 +  10048721 C-CTT
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            36450 4 +     45743 C-CTT
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         3423 4 +     29742 C-TTT
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        12484 4 -    104932 T-CTT
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     6513 4 +      8497 C-TTT
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 147375 4 +    154973 G-CTT
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                162418 4 +    265003 C-CTT
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  2469 4 -     19904 G-CTT
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  145903 4 -    168139 C-CTT
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          23406 4 -    100666 C-CTT
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70767599 4 +  92629107 A-TGt
i Mus_caroli.LT608236.1                                 I 259 C 0
s Mus_musculus.chr16                                     75490676 4 +  98207768 A-CTT
i Mus_musculus.chr16                                    I 259 C 0
s Mus_pahari.LT608305.1                                  67556876 4 +  89017189 a-ctt
i Mus_pahari.LT608305.1                                 I 256 C 0
s Mus_spretus.CM004110.1                                 74333412 4 +  97876770 A-Ctt
i Mus_spretus.CM004110.1                                I 260 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             13250 4 +     98495 A-CTT
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4425361 4 -  28371801 G-CTT
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     91364 4 -    117718 G-CTT
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               970267 4 +   8389877 c-ctt
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5021692 4 +   6462685 c-ctt
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3467770 4 -   3747815 c-ctt
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        13013 4 +     66751 C-CTT
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             6020 4 -      8794 C-CCT
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nasalis_larvatus.k141_153429                               9901 4 +     48152 C-TTT
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4485874 4 -  14209539 T-CTT
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3951987 4 -   4490290 G-CTT
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Nomascus_annamensis.k141_224620                             495 4 -      2316 C-TTT
i Nomascus_annamensis.k141_224620                       C 0 C 0
s Nomascus_concolor.k141_226614                              2594 4 -      5092 C-TTT
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_1032971                            168 4 -      1918 C-TTT
i Nomascus_gabriellae.k141_1032971                      C 0 I 14
s Nomascus_siki_b.tarseq_80                             26346 4 -  18771707 C-TTT
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  4016 4 +      4512 C-TTT
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                32112 4 +   3668941 C-CCT
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65567992 4 -  95554990 C-CTT
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            4718 4 +      6470 C-CTT
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65670325 4 +  89412551 C-CTT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     I 11 C 0
s Octodon_degus.JH651621.1                                3686862 4 +  10294119 T-CTT
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             680536 4 -   3126709 T-CTT
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1080656 4 +   1425656 G-CTT
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         37945 4 +     78940 G-CTT
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  125897 4 +    145789 A-CTT
i Ondatra_zibethicus.OndZib_scaffold_6821               I 145 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  37945 4 +     62360 C-ATT
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 I 132
s Orcinus_orca.KB316965.1                                 7225672 4 -   7562323 G-CTT
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              60908 4 -     66828 C-CTT
i Orycteropus_afer.OryAfe_flattened_line_13509          I 4 C 0
s Oryctolagus_cuniculus.CM000803.1                      141877331 4 + 163896628 A-TTT
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      309407 4 -    505867 C-CCT
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        1619 4 -     53940 A-CCT
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18009600 4 -  38779656 a-cTT
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134078245 4 - 275406953 G-CTT
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      79460 4 +    140051 G-CTT
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  35296 4 +    295523 C-CTT
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3639046 4 +  18214204 C-CTT
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5028722 4 -   6340057 C-CTT
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1067094 4 -   1292953 G-CTT
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188157656 4 - 188283584 C-TTT
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                               748 4 +     25005 C-TTT
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47515033 4 +  47705337 C-TTT
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 69023 4 -    104429 C-TTT
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    7552 4 +     14967 C-TTT
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 3417 4 -      7628 C-TTT
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    116780 4 -    135482 C-CTC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           6304 4 -     23713 C-CTT
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            25618 4 -     27972 C-CTT
i Perodicticus_potto.k141_713187                        C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4951271 4 -   8017169 A-ATT
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    14594 4 -     36578 T-CTT
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_648925              276 4 -       346 G-CTT
i Phocoena_phocoena.PhoPho_flattened_line_648925        C 0 C 0
s Piliocolobus_badius.k141_1987485                           3430 4 -      5908 C-TTT
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       4048 4 -     17985 C-TTT
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            3415 4 +      7694 C-TTT
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26741899 4 +  26888534 C-TTT
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pithecia_albicans.k141_991845                             44843 4 -     61926 C-TTT
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        26226 4 +     78826 C-TTT
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                             10274 4 -     15800 C-TTT
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        13473 4 -     16101 C-TTT
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          6702 4 +      9673 C-TTT
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13475702 4 -  19735023 C-TTT
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           14605 4 -     31692 C-TTT
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           6593 4 +     21690 G-CTT
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       23941 4 +     44506 C-TTT
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        24154 4 +     67491 C-TTT
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      14393 4 -     98129 C-TTT
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     23993 4 +    147771 C-TTT
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                          629 4 -     43940 C-TTT
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          4712 4 -     55515 C-TTT
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         24066 4 +    152463 C-TTT
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       1783 4 -    119457 C-TTT
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         13789 4 +    134592 C-TTT
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          24376 4 -     75465 C-TTT
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              188540 4 -    373494 C-TTT
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19809187 4 +  19899266 C-TTT
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               7180 4 -     15069 C-TTT
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              7295 4 +     14865 C-TTT
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6849462 4 +  12164890 c-CTT
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     19636 4 -     30946 n-nnn
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         4541 4 +     11805 C-CTT
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           43889 4 +     52369 C-CTT
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         36276 4 -     44753 C-CTT
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            18199 4 +     27322 C-CTT
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       17833 4 -     53241 C-CTT
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         40097 4 -     48185 C-CTT
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           36489 4 +     77221 a-ctt
i Psammomys_obesus.NESX01026517.1                       I 133 C 0
s Pteronotus_parnellii.KE867983.1                            5064 4 -     27784 C-CTT
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        247672 4 -    344369 G-CTT
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13246957 4 -  17261082 C-CTT
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             604908 4 -   3946241 C-CTT
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131535317 4 - 161321710 C-CTT
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             31283 4 +     56732 C-TTT
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6807777 4 +   6970761 C-TTT
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             7170 4 +     18040 C-TTT
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                16768 4 +     68503 G-CTT
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1788833 5 +   2252614 CCCTT
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                            1567 4 -     17045 C-TTT
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206379055 4 - 206558726 c-ttt
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44857957 4 -  45163003 C-TTT
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                20293 4 +    109198 C-CTT
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       8921 4 +     12214 G-CTT
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15673790 4 -  43202129 C-TTT
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        5703 4 +     34089 C-TTT
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              5645 4 -     60842 C-TTT
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              5738 4 +     67014 C-TTT
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              5716 4 +     60816 C-TTT
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 5653 4 -     76454 C-TTT
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17342390 4 -  30362882 C-TTT
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         21751 4 -     62485 C-TTT
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   37670 4 -    114521 T-CCT
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        4787 4 +     15331 C-TTT
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      10162 4 +     20762 C-TTT
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         120168 4 +    130994 C-TTC
i Semnopithecus_johnii.k141_785014                      C 0 I 3
s Semnopithecus_priam.k141_410937                           38946 4 +     46263 C-TTT
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     32091 4 +     42640 C-TTT
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        15114 4 +     30600 C-TTT
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  101239 4 -    120886 A-CTT
i Sigmodon_hispidus.SigHis_scaffold_11332               I 117 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            19868 4 +    739146 G-ATT
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17767432 4 -  27805282 C-CTT
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2240734 4 +   2842873 A-CTT
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             236048 3 -    276980 --CTT
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            28562 4 +     62062 C-CTT
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189273070 4 + 218635234 C-CTT
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        16291 4 -  13920577 C-TTT
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                1263 4 +     20549 C-CTT
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               15686 4 +     45698 C-CCT
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      808113 4 +   1148477 C-CTC
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  58826 4 +     99546 C-CTC
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194009184 4 - 194193292 C-TTT
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             39949 1 -     47444 ----T
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  137043 4 -    259118 C-CTT
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        28272 4 +     38948 C-TTT
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   21994 4 -     32910 C-TTT
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      3406 4 -     12939 C-TTT
i Trachypithecus_cristatus.k141_1011511                 C 0 I 6
s Trachypithecus_francoisi.k141_768164                       3324 4 -     14244 C-TTT
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           44721 4 -     54611 C-TTT
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        2518 4 -     11566 C-TTT
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     4701 4 -     15592 C-TTT
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          3353 4 +     14371 C-TTT
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   1640 4 +     12481 C-TTT
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        1514 4 -     24393 C-TTT
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       6764 4 -     28054 C-TTT
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44661548 4 -  44834318 C-TTT
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       3864 4 +     13828 C-TTT
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   6113 4 +     90398 G-CTT
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16086804 4 +  31416278 C-CTT
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2794367 1 -   3938065 ----T
i Tupaia_chinensis.KB320831.1                           I 2 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    6452 1 +     13056 ----T
i Tupaia_tana.TupTan_flattened_line_68454               I 2 C 0
s Tursiops_truncatus.MRVK01000923.1                      69314388 4 -  96451834 G-ATT
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   8248 4 +     10241 C-TTT
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6515792 4 +  28682327 T-CTT
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  6097 4 -     20643 C-CTT
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             25632 4 -     33872 C-CTT
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1525613 4 -   2331223 C-CTT
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                139507 4 -    281493 C-CCT
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       127850 4 -    134049 A-CTT
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        215263 4 -    227762 T-CTT
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     16795 4 -     20485 A-CTT
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 I 4
s Ziphius_cavirostris.ZipCav_flattened_line_127025           7880 4 -      8775 G-CTT
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           3741 0 -      6963 C
e Ochotona_princeps.JH802095.1                            4996729 2205 -  23139505 I
e Perognathus_longimembris.PerPac_flattened_line_19359        892 695 +     49596 I
e Tolypeutes_matacus.TolMat_scaffold_269431                  6479 0 +      6782 C
e Procavia_capensis.ProCapCap_scaffold_149274                2467 1156 -      9567 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Megaderma_lyra.MegLyr_scaffold_3562                       64783 239 -    234502 I
e Heterohyrax_brucei.HetBruBak_scaffold_25354               61360 1157 +     73687 I
e Echinops_telfairi.JH980316.1                           22999931 2 -  44670279 I
e Dasypus_novemcinctus.JH568778.1                          184585 0 -   6883506 C
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1008 325 -      5782 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19677 266 -    119109 I
e Tarsius_wallacei.k141_48636                               60532 3805 +     65473 I
e Tarsius_lariang.k141_609102                               27216 3812 +     42269 I
e Rattus_norvegicus.chr11                                13915860 1475 +  90463843 I
e Nannospalax_galili.KL201303.1                            119159 6 +    362372 I
e Ellobius_lutescens.LOEQ01003611.1                        240186 131 -    369425 I
e Dolichotis_patagonum.DolPat_scaffold_14102                36772 276 -     73477 I
e Dasyprocta_punctata.DasPun_flattened_line_634             59553 276 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                18462 277 +     26546 I
e Cricetomys_gambianus.CriGam_scaffold_949                 279183 147 -    399297 I
e Cephalopachus_bancanus.k141_702587                         8788 3391 +     21754 I
e Cavia_tschudii.CavTsc_scaffold_488                       177453 271 +    436027 I
e Cavia_porcellus.DS562889.1                             15799262 290 -  24440124 I
e Cavia_aperea.AVPZ01000278.1                            15787326 288 -  24422027 I
e Carlito_syrichta.NW_007248099.1                          309764 3411 +    345090 I
e Pan_paniscus.CM003386.1                               127575888 480 - 205426864 I
e Pan_troglodytes.CM009241.2                            120153042 480 - 196562556 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               14945 13 +    209709 CCC--C--TTTTGAG-----C-----A
s Acinonyx_jubatus.LLWD01000356.1                         2034961 13 +   3721120 CTC--T--TTCTGAA-----C-----T
i Acinonyx_jubatus.LLWD01000356.1                       C 0 I 1
s Acomys_cahirinus.AcoCah_scaffold_1625                    113769 13 -    189883 CTT--T--TTCTTAG-----T-----G
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 I 2
s Ailuropoda_melanoleuca.LNAT01000321.1                  10658525 13 +  23371972 TCT--C--TTCTAAG-----C-----C
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 I 1
s Ailurus_fulgens.LNAC01000003.1                          7095660 13 -  16596857 CCC--T--TTCTGAA-----C-----C
i Ailurus_fulgens.LNAC01000003.1                        C 0 I 1
s Allactaga_bullata.AllBul_scaffold_70162                   18314 13 -     22067 CCC--T--TTCTGAG-----C-----C
i Allactaga_bullata.AllBul_scaffold_70162               C 0 I 2
s Allenopithecus_nigroviridis.k141_2469532                   2670 13 -     60446 CCC--T--TTTTGAG-----C-----C
i Allenopithecus_nigroviridis.k141_2469532              C 0 I 1
s Allochrocebus_lhoesti.k141_3566948                         3387 13 -     29318 CCC--T--TTTTGAG-----C-----C
i Allochrocebus_lhoesti.k141_3566948                    C 0 I 1
s Allochrocebus_preussi.k141_1108977                         2323 13 +     38766 CCC--T--TTTTGAG-----C-----C
i Allochrocebus_preussi.k141_1108977                    C 0 I 1
s Allochrocebus_solatus.k141_371672                          3281 13 -     80423 CCC--T--TTTTGAG-----C-----C
i Allochrocebus_solatus.k141_371672                     C 0 I 1
s Alouatta_belzebul.k141_1818029                            11261 12 -     18050 CCA--T--TTTG-AG-----C-----C
i Alouatta_belzebul.k141_1818029                        C 0 I 1
s Alouatta_caraya.k141_1710068                                977 12 +      1555 CCA--T--TTTG-AG-----C-----C
i Alouatta_caraya.k141_1710068                          C 0 I 1
s Alouatta_discolor.k141_811576                             11934 12 -     21359 CCA--T--TTTG-AG-----C-----C
i Alouatta_discolor.k141_811576                         C 0 I 1
s Alouatta_juara.k141_1244470                                1557 12 +      2129 CCA--T--TTTG-AG-----C-----C
i Alouatta_juara.k141_1244470                           C 0 I 1
s Alouatta_macconnelli.k141_2177643                           941 12 -      1868 CCA--T--TTTG-AG-----C-----C
i Alouatta_macconnelli.k141_2177643                     C 0 I 4
s Alouatta_nigerrima.k141_3537692                             990 12 +      1660 CCA--T--TTTG-AG-----C-----C
i Alouatta_nigerrima.k141_3537692                       C 0 I 4
s Alouatta_palliata.k141_2764429                              903 12 -      1480 CCA--T--TTTG-AG-----C-----C
i Alouatta_palliata.k141_2764429                        C 0 I 1
s Alouatta_puruensis.k141_131505                              197 12 +      4855 CCA--T--TTTG-AG-----C-----C
i Alouatta_puruensis.k141_131505                        C 0 I 3
s Alouatta_seniculus.k141_1531728                            1118 12 -      1692 CCA--T--TTTG-AG-----C-----C
i Alouatta_seniculus.k141_1531728                       C 0 I 1
s Ammotragus_lervia.NIVO01013474.1                        3521098 13 +   4113121 ACC--T--TTCTGAg-----c-----t
i Ammotragus_lervia.NIVO01013474.1                      C 0 I 1
s Anoura_caudifer.AnoCau_scaffold_422                      391502 13 -    631301 TCC--T--TTCTGAG-----C-----C
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 I 1
s Antilocapra_americana.AntAmePen_scaffold_42841            31683 13 +     33004 ACC--T--TTCTGAG-----C-----T
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 I 1
s Aotus_azarae.k141_3170768                                 63608 12 +     78111 CCA--T--TTTG-AG-----C-----C
i Aotus_azarae.k141_3170768                             C 0 I 5
s Aotus_griseimembra.k141_3275623                            6550 12 +     22701 CCA--T--TTTG-AG-----C-----C
i Aotus_griseimembra.k141_3275623                       C 0 I 5
s Aotus_nancymaae.KZ196176.1                              5750507 12 +   9889416 CCA--T--Tttg-ag-----c-----c
i Aotus_nancymaae.KZ196176.1                            C 0 I 5
s Aotus_trivirgatus.k141_1740727                             7096 12 -    104377 CCA--T--TTTG-AG-----C-----C
i Aotus_trivirgatus.k141_1740727                        C 0 I 5
s Aotus_vociferans.k141_718647                               7098 12 +     23246 CCA--T--TTTG-AG-----C-----C
i Aotus_vociferans.k141_718647                          C 0 I 5
s Aplodontia_rufa.AprRuf_scaffold_231055                     1004 18 -      2492 AGC--T--TTCTGCA-----CCCTTTT
i Aplodontia_rufa.AprRuf_scaffold_231055                C 0 I 3
s Arctocebus_calabarensis.k141_587554                        1901 13 +      9265 CCC--T--TTTTGAG-----C-----T
i Arctocebus_calabarensis.k141_587554                   C 0 I 1
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 9919 13 -     29036 TCC--T--TTCTGAG-----C-----C
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 I 1
s Ateles_geoffroyi_b.tarseq_2582                             9540372 12 +  39197703 CTA--T--TTTG-AG-----C-----C
i Ateles_geoffroyi_b.tarseq_2582                           C 0 I 1
s Ateles_belzebuth.k141_1348307                             61643 12 +     85812 CTA--T--TTTG-AG-----C-----C
i Ateles_belzebuth.k141_1348307                         C 0 I 1
s Ateles_chamek.k141_1072810                                12656 12 +     89302 CTA--T--TTTG-AG-----C-----C
i Ateles_chamek.k141_1072810                            C 0 I 1
s Ateles_geoffroyi_a.k141_1300742                             17159 12 -     58268 CTA--T--TTTG-AG-----C-----C
i Ateles_geoffroyi_a.k141_1300742                         C 0 I 1
s Ateles_marginatus.k141_899112                             65151 12 +    119057 CTA--T--TTTG-AG-----C-----C
i Ateles_marginatus.k141_899112                         C 0 I 1
s Ateles_paniscus.k141_1631200                               7122 12 -     25888 CTA--T--TTTG-AG-----C-----C
i Ateles_paniscus.k141_1631200                          C 0 I 1
s Avahi_laniger.k141_2840928                                 7637 13 -     16375 CCC--T--TTTTGAG-----C-----T
i Avahi_laniger.k141_2840928                            C 0 I 1
s Avahi_peyrierasi.k141_798820                               1253 13 +      6337 CCC--T--TTTTGAG-----C-----T
i Avahi_peyrierasi.k141_798820                          C 0 I 1
s Balaenoptera_acutorostrata.KI537095.1                  26381161 13 +  51448160 CCC--T--TTCTGAG-----C-----C
i Balaenoptera_acutorostrata.KI537095.1                 C 0 I 1
s Balaenoptera_bonaerensis.DF502048.1                        6333 13 -     13118 CCC--T--TTCTGAG-----C-----C
i Balaenoptera_bonaerensis.DF502048.1                   C 0 I 1
s Beatragus_hunteri.BeaHun_scaffold_21644                   44204 13 -     72089 ACC--T--TTCTGAG-----C-----T
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 I 1
s Bison_bison.KN264915.1                                  6560827 13 +   6870073 ACC--T--TTCTGAg-----c-----t
i Bison_bison.KN264915.1                                C 0 I 1
s Bos_indicus.CM003021.1                                138140942 13 - 161108492 ACC--T--TTCTGAg-----c-----t
i Bos_indicus.CM003021.1                                C 0 I 1
s Bos_mutus.JH883513.1                                     573483 13 -    998990 ACC--T--TTCTGAg-----c-----t
i Bos_mutus.JH883513.1                                  C 0 I 1
s Bos_taurus.CM000177.6                                 136296675 13 - 158972876 ACC--T--TTCTGAg-----c-----t
i Bos_taurus.CM000177.6                                 C 0 I 1
s Bubalus_bubalis.KI419065.1                              1233756 13 -   1914593 ACC--T--TTCTGAg-----c-----t
i Bubalus_bubalis.KI419065.1                            C 0 I 1
s Cacajao_ayresi.k141_724503                               115009 12 -    171031 CCA--T--TTTG-AG-----C-----C
i Cacajao_ayresi.k141_724503                            C 0 I 1
s Cacajao_calvus.k141_96166                                 14038 12 +    125063 CCA--T--TTTG-AG-----C-----C
i Cacajao_calvus.k141_96166                             C 0 I 1
s Cacajao_hosomi.k141_303789                                16081 12 -    216513 CCA--T--TTTG-AG-----C-----C
i Cacajao_hosomi.k141_303789                            C 0 I 1
s Cacajao_melanocephalus.k141_1160263                        8624 12 -    134917 CCA--T--TTTG-AG-----C-----C
i Cacajao_melanocephalus.k141_1160263                   C 0 I 1
s Camelus_bactrianus.KN276303.1                           3220512 11 -   8989139 TCA--T--TTCTGAG------------
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           398213 11 -  15254737 TCA--T--TTCTGAG------------
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2973949 11 +   6889770 TCA--T--TTCTGAG------------
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11520674 13 +  39901454 CCT--T--TTCTGAG-----C-----C
i CanFam4.chr31                                         C 0 I 1
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   15699 13 +     87036 CCT--T--TTCTGAG-----C-----C
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 I 1
s Canis_lupus_dingo.QKWQ01001993.1                       11267343 13 -  35597290 CCT--T--TTCTGAG-----C-----C
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 I 1
s Canis_lupus_familiaris.chr31                           11089876 13 +  39895921 CCT--T--TTCTGAG-----C-----C
i Canis_lupus_familiaris.chr31                          C 0 I 1
s Canis_lupus_orion.HG994411.1                           16456889 13 -  44759192 CCT--T--TTCTGAG-----C-----C
i Canis_lupus_orion.HG994411.1                          C 0 I 1
s Capra_aegagrus.CM003214.1                              21326169 13 + 157394656 ACC--T--TTCTGAg-----c-----t
i Capra_aegagrus.CM003214.1                             C 0 I 1
s Capra_hircus.CM004562.1                               135707397 13 - 157403528 ACC--T--TTCTGAg-----c-----t
i Capra_hircus.CM004562.1                               C 0 I 1
s Carollia_perspicillata.CarPer_scaffold_4436               60709 13 +     67245 TCC--C--TTCTGAG-----G-----C
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 I 1
s Castor_canadensis.CasCan_scaffold_47037                   32073 14 +     33760 --------TTCTGGGGATTTT-----T
i Castor_canadensis.CasCan_scaffold_47037               I 2 I 2
s Catagonus_wagneri.CatWag_scaffold_1305                   159843 12 -    276539 CCC--C--TTCTGAG-----A------
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18891849 12 -  29618158 CCA--T--TTTG-AG-----C-----C
i Cebus_albifrons.Contig22                              C 0 I 5
s Cebus_olivaceus.k141_93739                                 9393 12 -     26817 CCA--T--TTTG-AG-----C-----C
i Cebus_olivaceus.k141_93739                            C 0 I 5
s Cebus_unicolor.k141_239009                                13636 12 +     25043 CCA--T--TTTG-AG-----C-----C
i Cebus_unicolor.k141_239009                            C 0 I 5
s Ceratotherium_simum.JH767818.1                          4364877 13 +   7569818 CCC--T--TTCTGAG-----C-----C
i Ceratotherium_simum.JH767818.1                        C 0 I 1
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         4634 13 -      9338 CCC--T--TTCTGAG-----C-----C
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 I 1
s Cercocebus_atys.KQ010443.1                              6556617 13 +   6739814 ccc--t--ttttgag-----c-----c
i Cercocebus_atys.KQ010443.1                            C 0 I 1
s Cercocebus_chrysogaster.k141_2328246                      28091 13 +     60454 CCC--T--TTTTGAG-----C-----C
i Cercocebus_chrysogaster.k141_2328246                  C 0 I 1
s Cercocebus_lunulatus.k141_4634644                          3298 13 -     21101 CCC--T--TTTTGAG-----C-----C
i Cercocebus_lunulatus.k141_4634644                     C 0 I 1
s Cercocebus_torquatus.k141_3969582                         60608 13 -    107033 CCC--T--TTTTGAG-----C-----C
i Cercocebus_torquatus.k141_3969582                     C 0 I 1
s Cercopithecus_ascanius.k141_4123525                        3487 13 -     17608 CCC--T--TTTTGAG-----C-----C
i Cercopithecus_ascanius.k141_4123525                   C 0 I 1
s Cercopithecus_cephus.k141_3893260                           646 13 +     45019 CCC--T--TTTTGAG-----C-----C
i Cercopithecus_cephus.k141_3893260                     C 0 I 1
s Cercopithecus_diana.k141_2561715                            730 13 +     15177 CCC--T--TTTTGAG-----C-----C
i Cercopithecus_diana.k141_2561715                      C 0 I 1
s Cercopithecus_hamlyni.k141_129805                          3530 13 +     16677 CCC--T--TTTTGAG-----C-----C
i Cercopithecus_hamlyni.k141_129805                     C 0 I 1
s Cercopithecus_lowei.k141_623764                           25699 13 +     35983 CCC--T--TTTTGAG-----C-----C
i Cercopithecus_lowei.k141_623764                       C 0 I 3
s Cercopithecus_albogularis.ctg51                              11992228 13 +  12117833 CCC--T--TTTTGAG-----C-----C
i Cercopithecus_albogularis.ctg51                             C 0 I 1
s Cercopithecus_mona.ctg12                               46478985 13 +  46592721 CCC--T--TTTTGAG-----C-----C
i Cercopithecus_mona.ctg12                              C 0 I 3
s Cercopithecus_neglectus.k141_2078027                      42540 13 -     45581 CCC--T--TTTTGAG-----T-----C
i Cercopithecus_neglectus.k141_2078027                  C 0 I 1
s Cercopithecus_nictitans.k141_1129315                       3542 13 +     35577 CCC--T--TTTTGAG-----C-----C
i Cercopithecus_nictitans.k141_1129315                  C 0 I 1
s Cercopithecus_petaurista.k141_64532                        3315 13 -     25661 CCC--T--TTTTGAG-----C-----C
i Cercopithecus_petaurista.k141_64532                   C 0 I 1
s Cercopithecus_pogonias.k141_3109732                        3295 13 -     17744 CCC--T--TTTTGAG-----C-----C
i Cercopithecus_pogonias.k141_3109732                   C 0 I 1
s Cercopithecus_roloway.k141_2263608                        22900 13 +     37128 CCC--T--TTTTGAG-----C-----C
i Cercopithecus_roloway.k141_2263608                    C 0 I 1
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           3741  5 -      6963 ------------GGG-----T-----C
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 I 1
s Cheirogaleus_major.k141_1157592                           59916  5 -     68416 ------------GAG-----C-----T
i Cheirogaleus_major.k141_1157592                       I 4 I 1
s Cheirogaleus_medius.k141_133808                            8960 13 +     13308 CCC--T--TTTTGAG-----C-----T
i Cheirogaleus_medius.k141_133808                       C 0 I 1
s Cheracebus_lucifer.k141_619653                             6666 12 -     18223 CCA--T--TTTG-AG-----C-----C
i Cheracebus_lucifer.k141_619653                        C 0 I 1
s Cheracebus_lugens.k141_203936                             23684 12 +     25473 CCA--T--TTTG-AG-----C-----C
i Cheracebus_lugens.k141_203936                         C 0 I 1
s Cheracebus_regulus.k141_2128895                           42724 12 +     57117 CCA--T--TTTG-AG-----C-----C
i Cheracebus_regulus.k141_2128895                       C 0 I 1
s Cheracebus_torquatus.k141_315545                          47403 12 +     54541 CCA--T--TTTG-AG-----C-----C
i Cheracebus_torquatus.k141_315545                      C 0 I 1
s Chinchilla_lanigera.JH721867.1                         15962684 13 +  43084221 atc--t--ttctaaa-----t-----t
i Chinchilla_lanigera.JH721867.1                        C 0 I 2
s Chiropotes_israelita.k141_1189915                         72210 12 +    196370 CCA--T--TTTG-AG-----C-----C
i Chiropotes_israelita.k141_1189915                     C 0 I 1
s Chiropotes_sagulatus.k141_773804                          16390 12 +     40510 CCA--T--TTTG-AG-----C-----C
i Chiropotes_sagulatus.k141_773804                      C 0 I 1
s Chlorocebus_aethiops.ctg22                             15140897 13 -  15256731 CCC--T--TTTTGAG-----C-----C
i Chlorocebus_aethiops.ctg22                            C 0 I 1
s Chlorocebus_pygerythrus.k141_1486215                      35506 13 -     53260 CCT--T--TTTTGAG-----C-----C
i Chlorocebus_pygerythrus.k141_1486215                  C 0 I 1
s Chlorocebus_sabaeus.CM001963.2                        101146065 13 + 101219884 ccc--t--ttttgag-----c-----c
i Chlorocebus_sabaeus.CM001963.2                        C 0 I 1
s Choloepus_didactylus.ChoDid_scaffold_36182                17478 13 -     21363 CCC--T--TTCTGGG-----T-----C
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 I 1
s Choloepus_hoffmanni.KN194586.1                           762783 13 +    964067 CCC--T--TTCTGGG-----T-----C
i Choloepus_hoffmanni.KN194586.1                        C 0 I 1
s Colobus_angolensis.KN985967.1                          10888057 13 +  10971483 CCC--T--TTTTGag-----c-----c
i Colobus_angolensis.KN985967.1                         C 0 I 1
s Colobus_guereza.LG08                                  147665985 13 + 156195979 CCC--T--TTTTGAG-----C-----C
i Colobus_guereza.LG08                                  C 0 I 1
s Colobus_polykomos.k141_1406057                            17968 13 +     23629 CCC--T--TTTTGAG-----C-----C
i Colobus_polykomos.k141_1406057                        C 0 I 1
s Condylura_cristata.JH655880.1                          60620540 13 +  78930452 CCC--A--TTCTGCA-----T-----T
i Condylura_cristata.JH655880.1                         C 0 I 1
s Cricetulus_griseus.LT883672.1                          53030106 13 +  72327488 ATT--T--CTTCAAG-----T-----C
i Cricetulus_griseus.LT883672.1                         C 0 I 2
s Crocidura_indochinensis.CroInd_scaffold_848148              517 13 +      1327 CAC--T--TTCTTAC-----C-----C
i Crocidura_indochinensis.CroInd_scaffold_848148        C 0 I 1
s Cryptoprocta_ferox.CryFer_flattened_line_19014            53013 13 -     70449 CTC--T--TTCTGAA-----T-----C
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 I 1
s Ctenodactylus_gundi.CteGun_scaffold_447                  209422  2 -    956709 ct-------------------------
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 32042 13 -     67205 ATC--T--TGGTAAG-----A-----T
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 I 2
s Dasypus_novemcinctus.JH568778.1                          184585  5 -   6883506 ------------GGG-----T-----C
i Dasypus_novemcinctus.JH568778.1                       C 0 I 1
s Daubentonia_madagascariensis.ctg11                     16845772 13 +  31942871 CCC--T--TTTTGAG-----T-----T
i Daubentonia_madagascariensis.ctg11                    C 0 I 1
s Delphinapterus_leucas.KZ290064.1                       80037789 13 -  96802777 CCC--T--TTCTGAG-----C-----C
i Delphinapterus_leucas.KZ290064.1                      C 0 I 1
s Desmodus_rotundus.KZ672188.1                           18699995 13 -  18957592 TCC--T--TTCTGAG-----C-----C
i Desmodus_rotundus.KZ672188.1                          C 0 I 1
s Dicerorhinus_sumatrensis.PEKH010003161.1                 323529 13 +    993696 CCC--T--TTCTGAG-----C-----C
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 I 1
s Diceros_bicornis.DicBicMic_scaffold_9545                   4181 13 +    151128 CCC--T--TTCTGAG-----C-----C
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 I 1
s Dinomys_branickii.DinBra_scaffold_1996                   157883 13 +    228994 AGC--T--CTCTGAC-----T-----T
i Dinomys_branickii.DinBra_scaffold_1996                C 0 I 2
s Dipodomys_ordii.KN672545.1                              3657345 10 +   4240102 ATc--g--ttg---g-----t-----t
i Dipodomys_ordii.KN672545.1                            C 0 I 2
s Dipodomys_stephensi.DipSte_scaffold_289041                  276 10 -       724 atc--g--ttc---g-----t-----t
i Dipodomys_stephensi.DipSte_scaffold_289041            I 64 n 12
s Eidolon_helvum.KE772537.1                                 13238 13 +     24177 CCC--T--TTCTGAG-----a-----a
i Eidolon_helvum.KE772537.1                             C 0 I 1
s Elaphurus_davidianus.JRFZ01086400.1                     1492442 13 +   1727528 AAC--T--TTCTGAG-----C-----T
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 I 1
s Elephantulus_edwardii.JH947210.1                        7829684 15 +  15467074 ctt--a--tttttta-----c---att
i Elephantulus_edwardii.JH947210.1                      C 0 I 1
s Ellobius_talpinus.LOJH01090055.1                           7447 12 -      7838 gtt--t--ttctgag-----t------
i Ellobius_talpinus.LOJH01090055.1                      C 0 I 2
s Enhydra_lutris.KZ291749.1                              85873182 13 +  99434291 CCC--T--TTCTGAG-----A-----C
i Enhydra_lutris.KZ291749.1                             C 0 I 1
s Eptesicus_fuscus.JH977687.1                             4707932 13 +   6522550 CCC--T--TTCTGAG-----C-----C
i Eptesicus_fuscus.JH977687.1                           C 0 I 1
s Equus_asinus.JREZ01000062.1                             5854167 13 -   7175178 CCC--T--TTCTGAA-----C-----C
i Equus_asinus.JREZ01000062.1                           C 0 I 1
s Equus_caballus.CM000402.2                              13352667 13 +  41866177 CCC--T--TTCTGAA-----C-----C
i Equus_caballus.CM000402.2                             C 0 I 1
s Equus_przewalskii.ATBW01073585.1                          14157 13 +     92910 CCC--T--TTCTGAA-----C-----C
i Equus_przewalskii.ATBW01073585.1                      C 0 I 1
s Erythrocebus_patas.Contig8                             48778076 13 -  48907691 CCC--T--TTTTGAG-----C-----C
i Erythrocebus_patas.Contig8                            C 0 I 1
s Eschrichtius_robustus.EscRob_flattened_line_685          316001 13 +    330699 CCC--T--TTCTGAG-----C-----C
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 I 1
s Eubalaena_japonica.EubJap_flattened_line_7756             62457 13 +     89355 CCC--T--TTCTGAG-----C-----C
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 I 1
s Eulemur_albifrons.k141_715837                              5947 13 +     13586 CCC--T--TTTTGAG-----C-----T
i Eulemur_albifrons.k141_715837                         C 0 I 1
s Eulemur_collaris.k141_311830                               5879 13 -      6809 CCC--T--TTTTGAG-----C-----T
i Eulemur_collaris.k141_311830                          C 0 I 1
s Eulemur_coronatus.k141_3240342                            12353 13 +     36558 CTC--T--TTTTGAG-----C-----T
i Eulemur_coronatus.k141_3240342                        C 0 I 1
s Eulemur_flavifrons.k141_903901                             8674 13 +     60246 CCC--T--TTTTGAG-----C-----T
i Eulemur_flavifrons.k141_903901                        C 0 I 1
s Eulemur_fulvus.k141_653297                                12152 13 +    109717 CCC--T--TTTTGAG-----C-----T
i Eulemur_fulvus.k141_653297                            C 0 I 1
s Eulemur_macaco.k141_747087                                  137 13 -     19505 CCC--T--TTTTGAG-----C-----T
i Eulemur_macaco.k141_747087                            C 0 I 1
s Eulemur_mongoz.k141_825972                                16812 13 +     27497 CCC--T--TTTTGAG-----C-----T
i Eulemur_mongoz.k141_825972                            C 0 I 1
s Eulemur_rubriventer.k141_411740                           19268 13 +     26808 CCC--T--TTTTGAG-----C-----T
i Eulemur_rubriventer.k141_411740                       C 0 I 1
s Eulemur_rufus.k141_1620292                                34006 13 +     46535 CCT--T--TTTTGAG-----C-----T
i Eulemur_rufus.k141_1620292                            C 0 I 1
s Eulemur_sanfordi.k141_186399                              16732 13 -     29447 CCC--T--TTTTGAG-----C-----T
i Eulemur_sanfordi.k141_186399                          C 0 I 1
s Felis_catus.CM001386.2                                129893933 13 - 159252932 CTC--T--TTCTGAA-----C-----T
i Felis_catus.CM001386.2                                C 0 I 1
s Felis_catus_fca126.CM031420.1                         129281017 13 - 158578461 CTC--T--TTCTGAA-----C-----T
i Felis_catus_fca126.CM031420.1                         C 0 I 1
s Felis_nigripes.FelNig_flattened_line_8080                 22157 13 +     52776 CTC--T--TTCTGAA-----C-----T
i Felis_nigripes.FelNig_flattened_line_8080             C 0 I 1
s Fukomys_damarensis.KN123630.1                          13892352 13 -  19261668 ATC--T--CTCTAAG-----C-----T
i Fukomys_damarensis.KN123630.1                         C 0 I 2
s Galago_moholi.ctg555                                     211807 13 -    847004 CCC--T--TTTTGAG-----C-----T
i Galago_moholi.ctg555                                  C 0 I 2
s Galago_senegalensis.k141_964197                           14181 13 -     43889 CCC--T--TTTTGAG-----C-----T
i Galago_senegalensis.k141_964197                       C 0 I 2
s Galagoides_demidoff.k141_1769638                          11248 13 +     27357 CCC--T--TTTTGAG-----C-----T
i Galagoides_demidoff.k141_1769638                      C 0 I 1
s Galeopterus_variegatus.GalVar_scaffold_354               157279 13 +    324696 TTC--T--TTTTAAA-----C-----T
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 I 1
s Giraffa_tippelskirchi.LVKQ01S012154.1                    182223 13 -    189561 ACC--T--TTCTGAg-----c-----t
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 I 1
s Glis_glis.GliGli_scaffold_79770                           14743 18 -     18683 CTC--T--TTCTGAG-----CCCATAC
i Glis_glis.GliGli_scaffold_79770                       C 0 I 2
s Gorilla_beringei.k141_111300                               6658 13 -     14630 CCC--C--TTTTGAG-----C-----C
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119653758 13 - 195582420 CCC--C--TTTTGAG-----C-----C
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   78161 14 +    118900 --------TTCTGAG-----CCCGTAT
i Graphiurus_murinus.GraMur_scaffold_4493               I 1 I 2
s Hapalemur_alaotrensis.k141_1280836                         2737 13 +     10286 CCC--T--TTTTGAG-----C-----T
i Hapalemur_alaotrensis.k141_1280836                    C 0 I 1
s Hapalemur_gilberti.k141_279011                             1217 13 -     11661 CCC--T--TTTTGAG-----C-----T
i Hapalemur_gilberti.k141_279011                        C 0 I 1
s Hapalemur_griseus.k141_1387522                             6543 13 +     56096 CCC--T--TTTTGAG-----C-----T
i Hapalemur_griseus.k141_1387522                        C 0 I 1
s Hapalemur_meridionalis.k141_186231                        29792 13 -     42470 CCC--T--TTTTGAG-----C-----T
i Hapalemur_meridionalis.k141_186231                    C 0 I 1
s Hapalemur_occidentalis.k141_797938                        46420 13 -     54384 CCC--T--TTTTGAG-----C-----T
i Hapalemur_occidentalis.k141_797938                    C 0 I 1
s Helogale_parvula.HelPar_flattened_line_22962              18208 13 +     53719 CTC--T--TTCTGAA-----T-----C
i Helogale_parvula.HelPar_flattened_line_22962          C 0 I 1
s Hemitragus_hylocrius.HemHyl_scaffold_16669                28458 13 -     91191 ACC--T--TTCTGAG-----C-----T
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 I 1
s Heterocephalus_glaber.JH602058.1                        2552075 13 +  31725842 ATC--T--TTCTAAG-----C-----T
i Heterocephalus_glaber.JH602058.1                      C 0 I 2
s Hippopotamus_amphibius.HipAmp_scaffold_1308              148095  5 +    277961 CCC--T--T------------------
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      279395 13 -    477199 CCT--T--TTCCAAG-----T-----C
i Hipposideros_armiger.JXIK01001085.1                   C 0 I 1
s Hipposideros_galeritus.HipGal_scaffold_345408               393 13 -       919 CCT--C--TTCTAAG-----C-----C
i Hipposideros_galeritus.HipGal_scaffold_345408         C 0 I 1
s Hoolock_leuconedys.ctg79                                      6347 13 -   7690867 CCC--T--TTTTGAG-----C-----C
i Hoolock_leuconedys.ctg79                                 C 0 I 1
s Hyaena_hyaena.HyaHya_flattened_line_20729                 18279 13 -     67322 CTC--T--TTCTGAA-----T-----T
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 I 1
s Hylobates_abbotti.k141_164775                              1128 13 -      2073 CCC--T--TTTTGAG-----C-----C
i Hylobates_abbotti.k141_164775                         C 0 I 3
s Hylobates_agilis.k141_55853                                 713 13 -      1487 CCC--T--TTTTGAG-----C-----C
i Hylobates_agilis.k141_55853                           I 21 I 3
s Hylobates_klossii.k141_183401                               683 13 -      1272 CTC--T--TTTTGAG-----G-----C
i Hylobates_klossii.k141_183401                         C 0 I 25
s Hylobates_pileatus_b.ContigUN                                 14626036 12 -  25970782 CCC--T--TTTTGAG-----C------
i Hylobates_pileatus_b.ContigUN                                C 0 I 1
s Hylobates_muelleri.k141_950183                              731 13 +      2027 CTC--T--TTTTGAG-----G-----C
i Hylobates_muelleri.k141_950183                        C 0 I 1
s Hylobates_pileatus_a.tarseq_592                             35196 12 -     60944 CCC--T--TTTTGAG-----C------
i Hylobates_pileatus_a.tarseq_592                         C 0 I 1
s Hystrix_cristata.HysCri_scaffold_50788                     7141 13 +     22540 AGA--T--TTTTAAG-----A-----T
i Hystrix_cristata.HysCri_scaffold_50788                C 0 I 2
s Ictidomys_tridecemlineatus.JH393315.1                   7126822 18 +  13083262 CTG--C--TTCTGAG-----CCATTTT
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 I 2
s Indri_indri.k141_5141390                                   1270 13 -      3181 CCC--T--TTTTGAG-----C-----T
i Indri_indri.k141_5141390                              C 0 I 1
s Inia_geoffrensis.IniGeo_flattened_line_66725               9995 13 +     17520 CCC--C--TTCTGAG-----C-----C
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 I 1
s Jaculus_jaculus.JH727545.1                                 1926 13 -      4668 CCC--T--TTCTgag-----c-----c
i Jaculus_jaculus.JH727545.1                            C 0 I 2
s Kogia_breviceps.KogBre_flattened_line_35920               24597 13 +     37189 CCC--T--TTCTGAA-----C-----G
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 I 1
s Lagothrix_lagothricha.k141_12968                          51241 12 -    147782 CCA--T--TTTG-AG-----C-----C
i Lagothrix_lagothricha.k141_12968                      C 0 I 1
s Lasiurus_borealis.LasBor_scaffold_59542                    4602 13 +     26176 CCC--T--TTCTGAG-----C-----C
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 I 1
s Lemur_catta.scaffold_1                                258408095 13 - 285822530 CCC--T--TTTTGAG-----C-----T
i Lemur_catta.scaffold_1                                C 0 I 1
s Lepilemur_ankaranensis.k141_884009                        24857  2 +     39228 --------------------C-----T
i Lepilemur_ankaranensis.k141_884009                    I 1 I 1
s Lepilemur_dorsalis.k141_134267                            54243  2 +     63517 --------------------C-----T
i Lepilemur_dorsalis.k141_134267                        I 1 I 1
s Lepilemur_ruficaudatus.k141_617879                        79505  2 +    116806 --------------------C-----T
i Lepilemur_ruficaudatus.k141_617879                    I 1 I 1
s Lepilemur_septentrionalis.k141_578524                     32496  2 -     33031 --------------------C-----T
i Lepilemur_septentrionalis.k141_578524                 I 1 I 1
s Leptonychotes_weddellii.KB714749.1                      3086961 13 -   3498232 CTC--T--TTCTGAG-----C-----C
i Leptonychotes_weddellii.KB714749.1                    C 0 I 1
s Lepus_americanus.LepAme_scaffold_62849                    14298 13 +     22452 CTC--T--TTCTGAA-----C-----C
i Lepus_americanus.LepAme_scaffold_62849                C 0 I 1
s Lipotes_vexillifer.KE558548.1                            136951 13 +   3060487 CCC--T--TTCTGAG-----C-----C
i Lipotes_vexillifer.KE558548.1                         C 0 I 1
s Lophocebus_aterrimus.ctg55                             19249694 13 +  19376315 CCC--T--TTTTGAG-----C-----C
i Lophocebus_aterrimus.ctg55                            C 0 I 1
s Loris_lydekkerianus.k141_550999                           11542 13 +     84689 CCC--T--TTTTGAG-----C-----T
i Loris_lydekkerianus.k141_550999                       C 0 I 3
s Loris_tardigradus.ctg97                                 3779291 13 +   6799190 CCC--T--TTTTGAG-----C-----T
i Loris_tardigradus.ctg97                               C 0 I 3
s Loxodonta_africana.GL010040.1                          20595794 13 -  62548349 CAC--T--TTCTTGA-----C-----C
i Loxodonta_africana.GL010040.1                         C 0 I 1
s Lycaon_pictus.CM007556.1                               11089332 13 +  39895028 CCT--T--TTCTGAG-----C-----C
i Lycaon_pictus.CM007556.1                              C 0 I 1
s Macaca_arctoides.k141_2201161                             21451 13 +     74745 CCC--T--TTTTGAG-----C-----A
i Macaca_arctoides.k141_2201161                         C 0 I 1
s Macaca_assamensis.Contig65                             12707911 13 +  12821369 CCC--T--TTTTGAG-----C-----A
i Macaca_assamensis.Contig65                            C 0 I 1
s Macaca_cyclopis.k119_883699                                 489 13 -     26467 CCC--T--TTTTGAG-----C-----A
i Macaca_cyclopis.k119_883699                           C 0 I 1
s Macaca_fascicularis.k141_155037                           48356 13 +     63263 CCC--T--TTTTGAG-----C-----A
i Macaca_fascicularis.k141_155037                       C 0 I 1
s Macaca_fuscata.k119_938422                                  466 13 -     26361 CCC--T--TTTTGAG-----C-----A
i Macaca_fuscata.k119_938422                            C 0 I 1
s Macaca_leonina.k141_467472                                 3643 13 -      7381 CCC--T--TTTTGAG-----C-----A
i Macaca_leonina.k141_467472                            C 0 I 1
s Macaca_maura.k141_251854                                  46881 13 -     79256 CCC--T--TTTTGAG-----C-----A
i Macaca_maura.k141_251854                              C 0 I 1
s Macaca_mulatta.NC_041755.1                            196036983 13 + 196197964 ccc--t--ttttgag-----c-----a
i Macaca_mulatta.NC_041755.1                            C 0 I 1
s Macaca_nemestrina.KQ004885.1                           11447149 13 +  11645122 ccc--t--ttttgag-----c-----a
i Macaca_nemestrina.KQ004885.1                          C 0 I 1
s Macaca_nigra.k141_282495                                   5835 13 -     46448 CCC--T--TTTTGAG-----C-----A
i Macaca_nigra.k141_282495                              C 0 I 1
s Macaca_radiata.k141_3680256                                3501 13 -     13212 CCC--T--TTTTGAG-----C-----A
i Macaca_radiata.k141_3680256                           C 0 I 1
s Macaca_siberu.k141_741907                                 17178 13 -     55006 CCC--T--TTTTGAG-----C-----A
i Macaca_siberu.k141_741907                             C 0 I 1
s Macaca_silenus.Contig12                                43842284 13 +  43892939 CCC--T--TTTTGAG-----C-----A
i Macaca_silenus.Contig12                               C 0 I 1
s Macaca_thibetana.k99_662710                               18465 13 -     24607 CCC--T--TTTTGAG-----C-----A
i Macaca_thibetana.k99_662710                           C 0 I 1
s Macaca_tonkeana.k141_2870633                               5832 13 -     27140 CCC--T--TTTTGAG-----C-----A
i Macaca_tonkeana.k141_2870633                          C 0 I 1
s Macroglossus_sobrinus.MacSob_scaffold_879                701954 13 +    802869 CTC--T--TTCTGAG-----G-----A
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 I 1
s Mandrillus_leucophaeus.scaffold125                     43438866 13 -  43563597 CCC--T--TTTTGAG-----C-----C
i Mandrillus_leucophaeus.scaffold125                    C 0 I 1
s Mandrillus_sphinx.Contig144                             4451680 13 -   4543643 CCC--T--TTTTGAG-----C-----C
i Mandrillus_sphinx.Contig144                           C 0 I 1
s Manis_javanica.JSZB01003966.1                            147036 13 +    252755 CCC--T--TTCTGAG-----C-----C
i Manis_javanica.JSZB01003966.1                         C 0 I 1
s Manis_pentadactyla.KN017078.1                             37179 13 +     58827 CCC--T--TTCTGAG-----C-----C
i Manis_pentadactyla.KN017078.1                         C 0 I 1
s Marmota_marmota.CZRN01000005.1                         36874742 18 +  64221397 CTG--T--TTCTGAA-----CCCTTTT
i Marmota_marmota.CZRN01000005.1                        C 0 I 2
s Mellivora_capensis.MelCap_flattened_line_15433             1999 13 -     87323 CCC--T--TTCTGAG-----C-----C
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 I 1
s Meriones_unguiculatus.MerUng_scaffold_52233               14203 13 +     15977 TCT--T--TTCTGAG-----T-----C
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 I 2
s Mesocricetus_auratus.KB708139.1                         1047913 13 -  26018355 ATT--T--CTTCAAG-----T-----G
i Mesocricetus_auratus.KB708139.1                       C 0 I 2
s Mesoplodon_bidens.MesBid_scaffold_475714                     98 13 +       551 CCC--T--TTCTGAG-----C-----C
i Mesoplodon_bidens.MesBid_scaffold_475714              C 0 I 1
s Microcebus_murinus.CM007691.1                          16511128 13 +  47401472 CCC--T--TTTGGAG-----T-----T
i Microcebus_murinus.CM007691.1                         C 0 I 1
s Microgale_talazaci.MicTal_scaffold_34660                  39284 13 -     48017 CAC--T--TTATTAA-----T-----C
i Microgale_talazaci.MicTal_scaffold_34660              C 0 I 1
s Micronycteris_hirsuta.MicHir_scaffold_37978               23888 13 -     32043 TCT--T--TTCTGAG-----C-----C
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 I 1
s Microtus_ochrogaster.CM001673.1                        22820637 12 -  98408828 ATT--T--TTCTGAG-----T------
i Microtus_ochrogaster.CM001673.1                       C 0 I 2
s Miniopterus_natalensis.LDJU01000022.1                   8211965 13 +  10048721 CCC--T--TTCTGAA-----C-----C
i Miniopterus_natalensis.LDJU01000022.1                 C 0 I 1
s Miniopterus_schreibersii.MinSch_scaffold_24116            36454 13 +     45743 CCC--T--TTCTGAG-----C-----C
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 I 1
s Miopithecus_ogouensis.k141_2935907                         3427 13 +     29742 CTC--T--TTTTGAG-----C-----C
i Miopithecus_ogouensis.k141_2935907                    C 0 I 1
s Mirounga_angustirostris.MirAng_flattened_line_8852        12488 13 -    104932 CTC--T--TTCTGAG-----C-----C
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 I 1
s Mirza_zaza.k141_226143                                     6517 13 +      8497 CCC--T--TTTGGAG-----C-----T
i Mirza_zaza.k141_226143                                C 0 I 1
s Monodon_monoceros.MonMon_M_scaffold_5598                 147379 13 +    154973 CCC--T--TTCTGAG-----C-----C
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 I 1
s Mormoops_blainvillei.MorMeg_scaffold_2952                162422 13 +    265003 CTC--T--TTCTGAG-----C-----C
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 I 1
s Moschus_moschiferus.MosMos_scaffold_78805                  2473 13 -     19904 ACC--T--TTCTGAG-----C-----T
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 I 1
s Mungos_mungo.MunMun_flattened_line_8729                  145907 13 -    168139 CTC--T--TTCTGAA-----T-----C
i Mungos_mungo.MunMun_flattened_line_8729               C 0 I 1
s Murina_feae.MurFea_scaffold_2254                          23410 13 -    100666 CCC--T--TTCTGAG-----C-----T
i Murina_feae.MurFea_scaffold_2254                      C 0 I 1
s Mus_caroli.LT608236.1                                  70767603 13 +  92629107 ctt--t--ttctgag-----t-----t
i Mus_caroli.LT608236.1                                 C 0 I 3
s Mus_musculus.chr16                                     75490680 13 +  98207768 ctt--t--ttctgag-----t-----t
i Mus_musculus.chr16                                    C 0 I 6
s Mus_pahari.LT608305.1                                  67556880 15 +  89017189 ctt--tttttctgag-----t-----t
i Mus_pahari.LT608305.1                                 C 0 I 3
s Mus_spretus.CM004110.1                                 74333416 13 +  97876770 ctt--t--ttctgag-----t-----t
i Mus_spretus.CM004110.1                                C 0 I 5
s Muscardinus_avellanarius.MusAve_scaffold_9643             13254 18 +     98495 CTC--T--TTCTGAG-----CCCATTT
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 I 2
s Mustela_putorius.JH417978.1                             4425365 13 -  28371801 CCC--T--TTCTGAG-----A-----C
i Mustela_putorius.JH417978.1                           C 0 I 1
s Myocastor_coypus.MyoCoy_scaffold_3653                     91368 13 -    117718 GTC--T--TTCTAAG-----A-----T
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 I 2
s Myotis_brandtii.KE161952.1                               970271 13 +   8389877 cct--t--ttctgag-----c-----c
i Myotis_brandtii.KE161952.1                            C 0 I 1
s Myotis_davidii.KB114863.1                               5021696 13 +   6462685 cct--t--ttctgag-----c-----c
i Myotis_davidii.KB114863.1                             C 0 I 1
s Myotis_lucifugus.GL429887.1                             3467774 13 -   3747815 cct--t--ttctgag-----c-----c
i Myotis_lucifugus.GL429887.1                           C 0 I 1
s Myotis_myotis.MyoMyo_scaffold_6123                        13017 13 +     66751 CCT--T--TTCTGAG-----C-----C
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 I 1
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             6024 13 -      8794 CCC--T--TTTGGCA-----T-----C
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 I 1
s Nasalis_larvatus.k141_153429                               9905 13 +     48152 CCC--T--TTTTGAG-----C-----C
i Nasalis_larvatus.k141_153429                          C 0 I 1
s Neomonachus_schauinslandi.NINY01007774.1                4485878 13 -  14209539 CTC--T--TTCTGAG-----C-----C
i Neomonachus_schauinslandi.NINY01007774.1              C 0 I 1
s Neophocaena_asiaeorientalis.KZ688543.1                  3951991 13 -   4490290 CCC--T--TTCTGAG-----C-----C
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 I 1
s Nomascus_annamensis.k141_224620                             499 15 -      2316 CCCATT--TTTTGGC-----T-----T
i Nomascus_annamensis.k141_224620                       C 0 I 1
s Nomascus_concolor.k141_226614                              2598 13 -      5092 CCC--T--TTTTGAG-----C-----C
i Nomascus_concolor.k141_226614                         C 0 I 1
s Nomascus_gabriellae.k141_1004198                           1161 13 +      1448 CCC--T--TTTTGAG-----C-----C
i Nomascus_gabriellae.k141_1004198                      I 21 I 27
s Nomascus_siki_b.tarseq_80                             26350 13 -  18771707 CCC--T--TTTTGAG-----C-----C
i Nomascus_siki_b.tarseq_80                         C 0 I 1
s Nomascus_siki_a.k141_595747                                  4020 13 +      4512 CCC--T--TTTTGAG-----C-----C
i Nomascus_siki_a.k141_595747                             C 0 I 25
s Nyctereutes_procyonoides.CAJHUB010000786.1                32116 13 +   3668941 CCT--T--TTCTGAG-----C-----C
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 I 1
s Nycticebus_bengalensis.LG16                            65567996 13 -  95554990 CCC--T--TTTTGAG-----C-----T
i Nycticebus_bengalensis.LG16                           C 0 I 3
s Nycticebus_coucang.k141_2051882                            4722 13 +      6470 CCC--T--TTTTGAG-----C-----T
i Nycticebus_coucang.k141_2051882                       C 0 I 3
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65670329 13 +  89412551 CCC--T--TTTTGAG-----C-----T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 I 3
s Octodon_degus.JH651621.1                                3686866 13 +  10294119 ATC--T--TTCTAAG-----A-----T
i Octodon_degus.JH651621.1                              C 0 I 2
s Odobenus_rosmarus.KB229369.1                             680540 13 -   3126709 CTC--T--TTCTGTG-----C-----C
i Odobenus_rosmarus.KB229369.1                          C 0 I 1
s Odocoileus_virginianus.KZ101650.1                       1080660 13 +   1425656 AAC--T--TTCTGAG-----C-----T
i Odocoileus_virginianus.KZ101650.1                     C 0 I 1
s Okapia_johnstoni.LVCL01S0017931.1                         37949 13 +     78940 ACC--T--TTCTGAG-----C-----T
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 I 1
s Ondatra_zibethicus.OndZib_scaffold_6821                  125901 12 +    145789 ATT--T--TTCTGAG-----T------
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 I 3
s Onychomys_torridus.OnyTor_scaffold_12578                  38081 13 +     62360 CTT--T--TTCTGAG-----T-----A
i Onychomys_torridus.OnyTor_scaffold_12578              I 132 I 2
s Orcinus_orca.KB316965.1                                 7225676 13 -   7562323 CCC--T--TTCTGAG-----C-----C
i Orcinus_orca.KB316965.1                               C 0 I 1
s Orycteropus_afer.OryAfe_flattened_line_13509              60912 13 -     66828 TTC--T--TTCTTGA-----C-----C
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 I 1
s Oryctolagus_cuniculus.CM000803.1                      141877335 13 + 163896628 CTC--T--TTCTGAA-----C-----A
i Oryctolagus_cuniculus.CM000803.1                      C 0 I 1
s Otocyon_megalotis.JAEUCK010005121.1                      309411 13 -    505867 CCT--T--TTCTGAG-----C-----C
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 I 1
s Otolemur_crassicaudatus.k141_505435                        1623 13 -     53940 CCC--T--TTTTGAG-----C-----T
i Otolemur_crassicaudatus.k141_505435                   C 0 I 1
s Otolemur_garnettii.GL873528.1                          18009604 13 -  38779656 CCC--T--TTTTgag-----c-----t
i Otolemur_garnettii.GL873528.1                         C 0 I 1
s Ovis_aries.CM001582.2                                 134078249 13 - 275406953 ACC--T--TTCTGAg-----c-----t
i Ovis_aries.CM001582.2                                 C 0 I 1
s Ovis_canadensis.OviCan_scaffold_6251                      79464 13 +    140051 ACC--T--TTCTGAG-----C-----T
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 I 1
s Panthera_onca.PanOnc_flattened_line_1615                  35300 13 +    295523 CTC--T--TTCTGAA-----C-----T
i Panthera_onca.PanOnc_flattened_line_1615              C 0 I 1
s Panthera_pardus.KV860323.1                              3639050 13 +  18214204 CTC--T--TTCTGAA-----C-----T
i Panthera_pardus.KV860323.1                            C 0 I 1
s Panthera_tigris.KE721879.1                              5028726 13 -   6340057 CTC--T--TTCTGAA-----C-----T
i Panthera_tigris.KE721879.1                            C 0 I 1
s Pantholops_hodgsonii.KE114631.1                         1067098 13 -   1292953 ACC--T--TTCTGAG-----C-----T
i Pantholops_hodgsonii.KE114631.1                       C 0 I 1
s Papio_anubis.CM001492.2                               188157660 13 - 188283584 CCC--T--TTTTGag-----c-----c
i Papio_anubis.CM001492.2                               C 0 I 1
s Papio_cynocephalus.k141_45376                               752 13 +     25005 CCC--T--TTTTGAG-----C-----C
i Papio_cynocephalus.k141_45376                         C 0 I 1
s Papio_hamadryas.Contig15                               47515037 13 +  47705337 CCC--T--TTTTGAG-----C-----C
i Papio_hamadryas.Contig15                              C 0 I 1
s Papio_kindae.k141_5458022                                 69027 13 -    104429 CCC--T--TTTTGAG-----C-----C
i Papio_kindae.k141_5458022                             C 0 I 1
s Papio_papio.k141_979496                                    7556 13 +     14967 CCC--T--TTTTGAG-----C-----C
i Papio_papio.k141_979496                               C 0 I 1
s Papio_ursinus.k141_1345919                                 3421 13 -      7628 CCC--T--TTTTGAG-----C-----C
i Papio_ursinus.k141_1345919                            C 0 I 1
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    116784 13 -    135482 CTC--T--TTCTGAA-----C-----C
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 I 1
s Perodicticus_ibeanus.k141_117958                           6308 13 -     23713 CCC--T--TTTTGAG-----C-----T
i Perodicticus_ibeanus.k141_117958                      C 0 I 1
s Perodicticus_potto.k141_713187                            25622 13 -     27972 CCC--T--TTTTGAG-----C-----T
i Perodicticus_potto.k141_713187                        C 0 I 1
s Petromus_typicus.PetTyp_scaffold_33007                    14598 13 -     36578 ATC--T--TTCTAAG-----T-----T
i Petromus_typicus.PetTyp_scaffold_33007                C 0 I 1
s Phocoena_phocoena.PhoPho_flattened_line_648925              280 13 -       346 CCC--T--TTCTGAG-----C-----C
i Phocoena_phocoena.PhoPho_flattened_line_648925        C 0 I 1
s Piliocolobus_badius.k141_1987485                           3434 13 -      5908 CCC--T--TCTTGAG-----C-----C
i Piliocolobus_badius.k141_1987485                      C 0 I 1
s Piliocolobus_gordonorum.k141_1270531                       4052 13 -     17985 CCC--T--TCTTGAG-----C-----C
i Piliocolobus_gordonorum.k141_1270531                  C 0 I 1
s Piliocolobus_kirkii.k141_929665                            3419 13 +      7694 CCC--T--TCTTGAG-----C-----C
i Piliocolobus_kirkii.k141_929665                       C 0 I 1
s Piliocolobus_tephrosceles.PDMG02000036.1               26741903 13 +  26888534 CCC--T--Tcttgag-----c-----c
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 I 1
s Pithecia_albicans.k141_991845                             44847 12 -     61926 CCA--T--TTTG-AG-----C-----C
i Pithecia_albicans.k141_991845                         C 0 I 1
s Pithecia_chrysocephala.k141_159118                        26230 12 +     78826 CCA--T--TTTG-AG-----C-----C
i Pithecia_chrysocephala.k141_159118                    C 0 I 1
s Pithecia_hirsuta.k141_1152968                             10278 12 -     15800 CCA--T--TTTG-AG-----C-----C
i Pithecia_hirsuta.k141_1152968                         C 0 I 1
s Pithecia_mittermeieri.k141_2119203                        13477 12 -     16101 CCA--T--TTTG-AG-----C-----C
i Pithecia_mittermeieri.k141_2119203                    C 0 I 1
s Pithecia_pissinattii.k141_1102319                          6706 12 +      9673 CCA--T--TTTG-AG-----C-----C
i Pithecia_pissinattii.k141_1102319                     C 0 I 1
s Pithecia_pithecia.tarseq_313                           13475706 12 -  19735023 CCA--T--TTTG-AG-----C-----C
i Pithecia_pithecia.tarseq_313                          C 0 I 1
s Pithecia_vanzolinii.k141_831006                           14609 12 -     31692 CCA--T--TTTG-AG-----C-----C
i Pithecia_vanzolinii.k141_831006                       C 0 I 1
s Platanista_gangetica.PlaMin_flattened_line_72990           6597 13 +     21690 CCC--T--GTCTGAG-----C-----C
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 I 1
s Plecturocebus_bernhardi.k141_959214                       23945 12 +     44506 CCA--T--TTTG-AG-----C-----C
i Plecturocebus_bernhardi.k141_959214                   C 0 I 1
s Plecturocebus_brunneus.k141_498086                        24158 12 +     67491 CCA--T--TTTG-AG-----C-----C
i Plecturocebus_brunneus.k141_498086                    C 0 I 1
s Plecturocebus_caligatus.k141_2539816                      14397 12 -     98129 CCA--T--TTTG-AG-----C-----C
i Plecturocebus_caligatus.k141_2539816                  C 0 I 1
s Plecturocebus_cinerascens.k141_744510                     23997 12 +    147771 CCA--T--TTTG-AG-----C-----C
i Plecturocebus_cinerascens.k141_744510                 C 0 I 1
s Plecturocebus_cupreus.k141_1145860                          633 12 -     43940 CCA--T--TTTG-AG-----C-----C
i Plecturocebus_cupreus.k141_1145860                    C 0 I 1
s Plecturocebus_dubius.k141_3565563                          4716 12 -     55515 CCA--T--TTTG-AG-----C-----C
i Plecturocebus_dubius.k141_3565563                     C 0 I 1
s Plecturocebus_grovesi.k141_242819                         24070 12 +    152463 CCA--T--TTTG-AG-----C-----C
i Plecturocebus_grovesi.k141_242819                     C 0 I 1
s Plecturocebus_hoffmannsi.k141_985533                       1787 12 -    119457 CCA--T--TTTG-AG-----C-----C
i Plecturocebus_hoffmannsi.k141_985533                  C 0 I 1
s Plecturocebus_miltoni.k141_841561                         13793 12 +    134592 CCA--T--TTTG-AG-----C-----C
i Plecturocebus_miltoni.k141_841561                     C 0 I 1
s Plecturocebus_moloch.k141_890597                          24380 12 -     75465 CCA--T--TTTG-AG-----C-----C
i Plecturocebus_moloch.k141_890597                      C 0 I 1
s Pongo_abelii.NDHI03003816.1                              188544 13 -    373494 CCC--T--TTTTGAG-----C-----C
i Pongo_abelii.NDHI03003816.1                           C 0 I 1
s Pongo_pygmaeus.ctg62                                   19809191 13 +  19899266 CCC--T--TTTTGAG-----C-----C
i Pongo_pygmaeus.ctg62                                  C 0 I 1
s Presbytis_comata.k141_672698                               7184 13 -     15069 CCC--T--TTTTGAG-----C-----C
i Presbytis_comata.k141_672698                          C 0 I 1
s Presbytis_mitrata.k141_860013                              7299 13 +     14865 CCC--T--TTTTGAG-----C-----C
i Presbytis_mitrata.k141_860013                         C 0 I 1
s Prolemur_simus.MPIZ01000048.1                           6849466 13 +  12164890 CCC--T--TTTTGAG-----C-----T
i Prolemur_simus.MPIZ01000048.1                         C 0 I 1
s Propithecus_coquerelli.NW_012147863.1                     19640 13 -     30946 nnn--n--nnnnnnn-----n-----n
i Propithecus_coquerelli.NW_012147863.1                 C 0 I 1
s Propithecus_coronatus.k141_1353159                         4545 13 +     11805 CCC--T--TTTTGAG-----C-----T
i Propithecus_coronatus.k141_1353159                    C 0 I 1
s Propithecus_diadema.k141_577245                           43893 13 +     52369 CCC--T--TTCTGAG-----C-----T
i Propithecus_diadema.k141_577245                       C 0 I 1
s Propithecus_edwardsi.k141_1317105                         36280 13 -     44753 CCC--T--TTCTGAG-----C-----T
i Propithecus_edwardsi.k141_1317105                     C 0 I 1
s Propithecus_perrieri.k141_7554                            18203 13 +     27322 CCC--T--TTCTGAG-----C-----T
i Propithecus_perrieri.k141_7554                        C 0 I 1
s Propithecus_tattersalli.k141_907138                       17837 13 -     53241 CCC--T--TTTTGAG-----C-----T
i Propithecus_tattersalli.k141_907138                   C 0 I 1
s Propithecus_verreauxi.k141_158021                         40101 13 -     48185 CCC--T--TTTTGAG-----C-----T
i Propithecus_verreauxi.k141_158021                     C 0 I 1
s Psammomys_obesus.NESX01026517.1                           36493 13 +     77221 tct--t--ttctgag-----t-----c
i Psammomys_obesus.NESX01026517.1                       C 0 I 2
s Pteronotus_parnellii.KE867983.1                            5068 13 -     27784 CTC--T--TTCTGAG-----C-----C
i Pteronotus_parnellii.KE867983.1                       C 0 I 1
s Pteronura_brasiliensis.PteBra_flattened_line_1343        247676 13 -    344369 CCC--T--TTCTGAG-----A-----C
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 I 1
s Pteropus_alecto.KB031157.1                             13246961 13 -  17261082 CCT--T--TTCTgag-----a-----a
i Pteropus_alecto.KB031157.1                            C 0 I 1
s Pteropus_vampyrus.KN525959.1                             604912 13 -   3946241 CCT--T--TTCTGAG-----A-----A
i Pteropus_vampyrus.KN525959.1                          C 0 I 1
s Puma_concolor.QAVW01000427.1                          131535321 13 - 161321710 CTC--T--TTCTGAA-----C-----T
i Puma_concolor.QAVW01000427.1                          C 0 I 1
s Pygathrix_cinerea.k141_374971                             31287 13 +     56732 CCC--T--TTTTGAG-----C-----C
i Pygathrix_cinerea.k141_374971                         C 0 I 1
s Pygathrix_nigripes_b.ctg79                                 6807781 13 +   6970761 CCC--T--TTTTGAG-----C-----C
i Pygathrix_nigripes_b.ctg79                               C 0 I 1
s Pygathrix_nigripes_a.k141_101123                             7174 13 +     18040 CCC--T--TTTTGAG-----C-----C
i Pygathrix_nigripes_a.k141_101123                        C 0 I 1
s Rangifer_tarandus.RanTarSib_scaffold_24239                16772 13 +     68503 AAC--T--TTCTGAG-----C-----T
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 I 1
s Rhinolophus_sinicus.LVEH01000179.1                      1788838 13 +   2252614 CCT--T--TTCTGAG-----C-----C
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 I 1
s Rhinopithecus_bieti.k119_554384                            1571 13 -     17045 CCC--T--TTTTCAG-----C-----C
i Rhinopithecus_bieti.k119_554384                       C 0 I 1
s Rhinopithecus_roxellana.NC_044549.1                   206379059 13 - 206558726 ccc--t--ttttcag-----c-----c
i Rhinopithecus_roxellana.NC_044549.1                   C 0 I 1
s Rhinopithecus_strykeri.ctg4                            44857961 13 -  45163003 CCC--T--TTTTCAG-----C-----C
i Rhinopithecus_strykeri.ctg4                           C 0 I 1
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                20297 13 +    109198 CCC--T--TTCTGAG-----A-----A
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 I 1
s Saiga_tatarica.SaiTat_scaffold_82192                       8925 13 +     12214 ACC--T--TTCTGAG-----C-----T
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 I 1
s Saimiri_boliviensis.NW_024100938.1                     15673794 12 -  43202129 CCA--T--Tttg-ag-----c-----c
i Saimiri_boliviensis.NW_024100938.1                    C 0 I 1
s Saimiri_cassiquiarensis.k141_808270                        5707 12 +     34089 CCA--T--TTTG-AG-----C-----C
i Saimiri_cassiquiarensis.k141_808270                   C 0 I 1
s Saimiri_macrodon.k141_2087127                              5649 12 -     60842 CCA--T--TTTG-AG-----C-----C
i Saimiri_macrodon.k141_2087127                         C 0 I 1
s Saimiri_oerstedii.k141_841116                              5742 12 +     67014 CCA--T--TTTG-AG-----C-----C
i Saimiri_oerstedii.k141_841116                         C 0 I 1
s Saimiri_sciureus.k141_1947592                              5720 12 +     60816 CCA--T--TTTG-AG-----C-----C
i Saimiri_sciureus.k141_1947592                         C 0 I 1
s Saimiri_ustus.k141_1282476                                 5657 12 -     76454 CCA--T--TTTG-AG-----C-----C
i Saimiri_ustus.k141_1282476                            C 0 I 1
s Sapajus_apella.ctg10                                   17342394 12 -  30362882 CCA--T--TTTG-AG-----C-----C
i Sapajus_apella.ctg10                                  C 0 I 5
s Sapajus_macrocephalus.k141_966464                         21755 12 -     62485 CCA--T--TTTG-AG-----C-----C
i Sapajus_macrocephalus.k141_966464                     C 0 I 5
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   37674 14 -    114521 CCT--T-TTTCTGAA-----T-----C
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 I 1
s Semnopithecus_entellus.k141_1572367                        4791 13 +     15331 CCC--T--TTTTGAG-----C-----C
i Semnopithecus_entellus.k141_1572367                   C 0 I 1
s Semnopithecus_hypoleucos.k141_761524                      10166 13 +     20762 CCC--T--TTTTGAG-----C-----C
i Semnopithecus_hypoleucos.k141_761524                  C 0 I 1
s Semnopithecus_johnii.k141_785014                         120175  9 +    130994 --------TTTTGAG-----C-----C
i Semnopithecus_johnii.k141_785014                      I 3 I 1
s Semnopithecus_priam.k141_410937                           38950 13 +     46263 CCC--T--TTTTGAG-----C-----C
i Semnopithecus_priam.k141_410937                       C 0 I 1
s Semnopithecus_schistaceus.k141_387461                     32095 13 +     42640 CCC--T--TTTTGAG-----C-----C
i Semnopithecus_schistaceus.k141_387461                 C 0 I 1
s Semnopithecus_vetulus.k141_1143185                        15118 13 +     30600 CCC--T--TTTTGAG-----C-----C
i Semnopithecus_vetulus.k141_1143185                    C 0 I 1
s Sigmodon_hispidus.SigHis_scaffold_11332                  101243 13 -    120886 CTC--T--TTCTGAG-----C-----T
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 I 2
s Solenodon_paradoxus.SolPar_flattened_line_1012            19872 13 +    739146 CCC--T--TTCTGAG-----A-----T
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 I 1
s Sorex_araneus.JH798170.1                               17767436 13 -  27805282 CAC--T--TTATGAC-----C-----C
i Sorex_araneus.JH798170.1                              C 0 I 1
s Spermophilus_dauricus.KZ294190.1                        2240738 18 +   2842873 CTG--C--TTCTGAG-----CCATTTT
i Spermophilus_dauricus.KZ294190.1                      C 0 I 2
s Spilogale_gracilis.SpiGra_flattened_line_905             236051 13 -    276980 CCT--T--TTCTGAG-----C-----C
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 I 1
s Suricata_suricatta.SurSur_flattened_line_20339            28566 13 +     62062 CTC--T--TTCTGAA-----T-----C
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 I 1
s Sus_scrofa.CM000824.4                                 189273074 13 + 218635234 CCC--T--TTCTGAG-----G-----T
i Sus_scrofa.CM000824.4                                 C 0 I 1
s Symphalangus_syndactylus.tarseq_24                        16295 13 -  13920577 CCC--T--TTTTGAG-----C-----C
i Symphalangus_syndactylus.tarseq_24                    C 0 I 1
s Tadarida_brasiliensis.TadBra_scaffold_61492                1267 13 +     20549 CCC--T--TTCTGAG-----C-----C
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 I 2
s Tamandua_tetradactyla.TamTet_scaffold_26877               15690 13 +     45698 CCC--T--TTCGGCA-----T-----C
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 I 1
s Tapirus_indicus.TapInd_scaffold_176                      808117 13 +   1148477 CCC--T--TTCTGAA-----C-----C
i Tapirus_indicus.TapInd_scaffold_176                   C 0 I 1
s Tapirus_terrestris.TapTer_scaffold_14939                  58830 13 +     99546 CCC--T--TTCTGAA-----C-----C
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 I 1
s Theropithecus_gelada.CM009951.1                       194009188 13 - 194193292 CCC--T--TTTCGag-----c-----c
i Theropithecus_gelada.CM009951.1                       C 0 I 1
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             39950 13 -     47444 ATC--A--TTCTAAG-----T-----T
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 I 2
s Tolypeutes_matacus.TolMat_scaffold_269431                  6479  5 +      6782 ------------GGG-----T-----C
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 I 1
s Tonatia_saurophila.TonSau_scaffold_3334                  137047 13 -    259118 TCC--T--TTCTGAG-----C-----C
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 I 1
s Trachypithecus_auratus.k141_738098                        28276 13 +     38948 CCC--T--TTTTGAG-----C-----C
i Trachypithecus_auratus.k141_738098                    C 0 I 163
s Trachypithecus_crepusculus.k141_1588528                   21998 13 -     32910 CCC--T--TTTTGAG-----C-----C
i Trachypithecus_crepusculus.k141_1588528               C 0 I 1
s Trachypithecus_cristatus.k141_1011511                      3416  7 -     12939 ----------TTGAG-----C-----C
i Trachypithecus_cristatus.k141_1011511                 I 6 I 490
s Trachypithecus_francoisi.k141_768164                       3328 12 -     14244 CCC--T--TTTTGA------C-----C
i Trachypithecus_francoisi.k141_768164                  C 0 I 1
s Trachypithecus_geei.k141_670367                           44725 13 -     54611 CCC--T--TTTTGAG-----C-----C
i Trachypithecus_geei.k141_670367                       C 0 I 1
s Trachypithecus_germaini.k141_868450                        2522 13 -     11566 CCC--T--TTTTGAG-----C-----C
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     4705 13 -     15592 CCC--T--TTTTGAG-----C-----C
i Trachypithecus_hatinhensis.k141_504423                C 0 I 1
s Trachypithecus_laotum.k141_760702                          3357 13 +     14371 CCC--T--TTTTGAG-----C-----C
i Trachypithecus_laotum.k141_760702                     C 0 I 1
s Trachypithecus_leucocephalus.k141_381681                   1644 12 +     12481 CCC--T--TTTTGA------C-----C
i Trachypithecus_leucocephalus.k141_381681              C 0 I 1
s Trachypithecus_melamera.k141_699241                        1518 13 -     24393 CCC--T--TTTTGAG-----C-----C
i Trachypithecus_melamera.k141_699241                   C 0 I 1
s Trachypithecus_obscurus.k141_1115109                       6768 13 -     28054 CCC--T--TTTTGAG-----C-----C
i Trachypithecus_obscurus.k141_1115109                  C 0 I 1
s Trachypithecus_phayrei.ctg3                            44661552 13 -  44834318 CCC--T--TTTTGAG-----C-----C
i Trachypithecus_phayrei.ctg3                           C 0 I 1
s Trachypithecus_pileatus.k141_1022309                       3868 13 +     13828 CCC--T--TTTTGAG-----C-----C
i Trachypithecus_pileatus.k141_1022309                  C 0 I 1
s Tragulus_javanicus.TraJav_scaffold_14717                   6117 14 +     90398 CCC--T-TTTCTGAT-----C-----C
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 I 1
s Trichechus_manatus.JH594618.1                          16086808 13 +  31416278 CAC--T--TTCTTGA-----T-----C
i Trichechus_manatus.JH594618.1                         C 0 I 1
s Tupaia_chinensis.KB320831.1                             2794368 11 -   3938065 CCC--T--TTTTGAG------------
i Tupaia_chinensis.KB320831.1                           C 0 I 2
s Tupaia_tana.TupTan_flattened_line_68454                    6453 11 +     13056 CCC--T--TTTTGAG------------
i Tupaia_tana.TupTan_flattened_line_68454               C 0 I 2
s Tursiops_truncatus.MRVK01000923.1                      69314392 13 -  96451834 CCC--T--TTCTGAG-----C-----C
i Tursiops_truncatus.MRVK01000923.1                     C 0 I 1
s Uropsilus_gracilis.UroGra_scaffold_69449                   8252  3 +     10241 --------------A-----T-----C
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 I 1
s Ursus_maritimus.KK498671.1                              6515796 13 +  28682327 CCT--T--TTCTAAG-----C-----C
i Ursus_maritimus.KK498671.1                            C 0 I 1
s Varecia_rubra.k141_432109                                  6101 13 -     20643 CCC--T--TTTTGAG-----C-----T
i Varecia_rubra.k141_432109                             C 0 I 1
s Varecia_variegata.k141_775891                             25636 13 -     33872 CCC--T--TTTTGAG-----C-----T
i Varecia_variegata.k141_775891                         C 0 I 1
s Vicugna_pacos.KN269600.1                                1525617 11 -   2331223 TCA--T--TTCTGAG------------
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                139511 13 -    281493 CCT--T--TTCTGAG-----C-----C
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 I 1
s Xerus_inauris.XerIna_scaffold_7898                       127854 18 -    134049 CTC--T--TTCTGAA-----CCCTTTT
i Xerus_inauris.XerIna_scaffold_7898                    C 0 I 2
s Zalophus_californianus.ZalCal_flattened_line_4097        215267 13 -    227762 CTC--T--TTCTGTG-----C-----C
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 I 1
s Zapus_hudsonius.ZapHud_scaffold_64392                     16803  6 -     20485 -----------GGAG-----C-----C
i Zapus_hudsonius.ZapHud_scaffold_64392                 I 4 I 2
s Ziphius_cavirostris.ZipCav_flattened_line_127025           7884 13 -      8775 CCC--T--TTCTGAC-----T-----C
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 I 1
e Ochotona_princeps.JH802095.1                            4996729 2205 -  23139505 I
e Perognathus_longimembris.PerPac_flattened_line_19359        892 695 +     49596 I
e Procavia_capensis.ProCapCap_scaffold_149274                2467 1156 -      9567 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Megaderma_lyra.MegLyr_scaffold_3562                       64783 239 -    234502 I
e Heterohyrax_brucei.HetBruBak_scaffold_25354               61360 1157 +     73687 I
e Echinops_telfairi.JH980316.1                           22999931  2 -  44670279 I
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1008 325 -      5782 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19677 266 -    119109 I
e Tarsius_wallacei.k141_48636                               60532 3805 +     65473 I
e Tarsius_lariang.k141_609102                               27216 3812 +     42269 I
e Rattus_norvegicus.chr11                                13915860 1475 +  90463843 I
e Peromyscus_maniculatus.KI615518.1                       4951275  0 -   8017169 C
e Nannospalax_galili.KL201303.1                            119159  6 +    362372 I
e Ellobius_lutescens.LOEQ01003611.1                        240186 131 -    369425 I
e Dolichotis_patagonum.DolPat_scaffold_14102                36772 276 -     73477 I
e Dasyprocta_punctata.DasPun_flattened_line_634             59553 276 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                18462 277 +     26546 I
e Cricetomys_gambianus.CriGam_scaffold_949                 279183 147 -    399297 I
e Cephalopachus_bancanus.k141_702587                         8788 3391 +     21754 I
e Cavia_tschudii.CavTsc_scaffold_488                       177453 271 +    436027 I
e Cavia_porcellus.DS562889.1                             15799262 290 -  24440124 I
e Cavia_aperea.AVPZ01000278.1                            15787326 288 -  24422027 I
e Carlito_syrichta.NW_007248099.1                          309764 3411 +    345090 I
e Pan_paniscus.CM003386.1                               127575888 480 - 205426864 I
e Pan_troglodytes.CM009241.2                            120153042 480 - 196562556 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               14958 23 +    209709 t-t---ttt-----c-----cc-----cc-----TGGGTT-GGTT-A--T-A
s Acinonyx_jubatus.LLWD01000356.1                         2034975 19 +   3721120 T-T---TTC-T---C-----CT-----C------TGGG-----AT-A--T-A
i Acinonyx_jubatus.LLWD01000356.1                       I 1 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    113784 22 -    189883 --------------T-----TC-----C-TTCTTTGGGCT-GGTT-A--T-C
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 2 I 1000
s Ailuropoda_melanoleuca.LNAT01000321.1                  10658539 18 +  23371972 C-T---TCC-----C-----CT-----T------TGTG-----AT-A--T-A
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 1 C 0
s Ailurus_fulgens.LNAC01000003.1                          7095674 18 -  16596857 G-T---TCC-----T-----TT-----C------TGGG-----At-a--t-a
i Ailurus_fulgens.LNAC01000003.1                        I 1 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   18329 22 -     22067 --------------T-----TCCTTCCC------TGGGCT-GGTT-A--T-A
i Allactaga_bullata.AllBul_scaffold_70162               I 2 C 0
s Allenopithecus_nigroviridis.k141_2469532                   2684 24 -     60446 T-T---TTT-T---C-----CC-----TC-----TGGGTT-GGTT-A--T-A
i Allenopithecus_nigroviridis.k141_2469532              I 1 C 0
s Allochrocebus_lhoesti.k141_3566948                         3401 24 -     29318 T-T---TTT-T---C-----CC-----TC-----TGGGTT-GGTT-A--T-A
i Allochrocebus_lhoesti.k141_3566948                    I 1 C 0
s Allochrocebus_preussi.k141_1108977                         2337 24 +     38766 T-T---TTT-T---C-----CC-----TC-----TGGGTT-GGTT-A--T-A
i Allochrocebus_preussi.k141_1108977                    I 1 C 0
s Allochrocebus_solatus.k141_371672                          3295 24 -     80423 T-T---TTT-T---C-----CC-----TC-----TGGGTT-GGTT-A--T-A
i Allochrocebus_solatus.k141_371672                     I 1 C 0
s Alouatta_belzebul.k141_1818029                            11274 26 -     18050 T-T---TTTCTTT-T-----TT-----CC-----TGGGT--GTGT-A--T-A
i Alouatta_belzebul.k141_1818029                        I 1 C 0
s Alouatta_caraya.k141_1710068                                990 26 +      1555 T-T---TTGCTTT-T-----TT-----CC-----TGGGT--GTTT-A--T-A
i Alouatta_caraya.k141_1710068                          I 1 C 0
s Alouatta_discolor.k141_811576                             11947 26 -     21359 T-T---TTTCTTT-T-----TT-----CC-----TGGGT--GTGT-A--T-A
i Alouatta_discolor.k141_811576                         I 1 C 0
s Alouatta_juara.k141_1244470                                1570 26 +      2129 T-T---TTTCTTT-T-----TT-----CC-----TGGGT--GTTT-A--T-A
i Alouatta_juara.k141_1244470                           I 1 C 0
s Alouatta_macconnelli.k141_2177643                           957 16 -      1868 --------------------TT-----CC-----TGGGT--GTTT-A--T-A
i Alouatta_macconnelli.k141_2177643                     I 4 C 0
s Alouatta_nigerrima.k141_3537692                            1006 16 +      1660 --------------------TT-----CC-----TGGGT--GTTT-A--T-A
i Alouatta_nigerrima.k141_3537692                       I 4 C 0
s Alouatta_palliata.k141_2764429                              916 26 -      1480 T-T---TTTCTTT-T-----TT-----CC-----TGGGT--GTTT-A--T-A
i Alouatta_palliata.k141_2764429                        I 1 C 0
s Alouatta_puruensis.k141_131505                              212 17 +      4855 --------------T-----TT-----CC-----TGGGT--GTTT-A--T-A
i Alouatta_puruensis.k141_131505                        I 3 C 0
s Alouatta_seniculus.k141_1531728                            1131 26 -      1692 T-T---TTTCTTT-T-----TT-----CC-----TGGGT--GTTT-A--T-A
i Alouatta_seniculus.k141_1531728                       I 1 C 0
s Ammotragus_lervia.NIVO01013474.1                        3521112 18 +   4113121 t-t---ttc---t-t-----cc-----a------agg------at-a--c-a
i Ammotragus_lervia.NIVO01013474.1                      I 1 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      391516 19 -    631301 T-C---TTC-T---T-----CC-----A------TGGG-----AT-A--T-A
i Anoura_caudifer.AnoCau_scaffold_422                   I 1 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            31697 18 +     33004 T-T---TTC-T---T-----CC-----A------AGG------AC-A--C-A
i Antilocapra_americana.AntAmePen_scaffold_42841        I 1 C 0
s Aotus_azarae.k141_3170768                                 63625 22 +     78111 --------------TCTTTTTT-----CC-----TGGGT--GGTT-A--T-A
i Aotus_azarae.k141_3170768                             I 5 C 0
s Aotus_griseimembra.k141_3275623                            6567 22 +     22701 --------------TCTTTTTT-----CC-----TGGGT--GGTT-A--T-A
i Aotus_griseimembra.k141_3275623                       I 5 C 0
s Aotus_nancymaae.KZ196176.1                              5750524 22 +   9889416 --------------tctttttt-----cc-----tgggt--GGTT-A--T-A
i Aotus_nancymaae.KZ196176.1                            I 5 C 0
s Aotus_trivirgatus.k141_1740727                             7113 22 -    104377 --------------TCTTTTTT-----CC-----TGGGT--GGTT-A--T-A
i Aotus_trivirgatus.k141_1740727                        I 5 C 0
s Aotus_vociferans.k141_718647                               7115 22 +     23246 --------------TCTTTGTT-----CC-----TGGGT--GGTT-A--T-A
i Aotus_vociferans.k141_718647                          I 5 C 0
s Aplodontia_rufa.AprRuf_scaffold_231055                     1025  7 -      2492 -----------------------------------------GAAT-T--T-T
i Aplodontia_rufa.AprRuf_scaffold_231055                I 3 C 0
s Arctocebus_calabarensis.k141_587554                        1915 24 +      9265 T-T---TTC-T---T-----CT-----TT-----TGAGTT-GGTT-A--T-A
i Arctocebus_calabarensis.k141_587554                   I 1 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 9933 19 -     29036 T-T---TTCC----T-----CT-----G------TGGG-----AT-A--T-A
i Artibeus_jamaicensis.ArtJam_scaffold_41619            I 1 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9540385 26 +  39197703 T-T---TTTCTTT-T-----TT-----CC-----TGTGT--GTTT-A--T-A
i Ateles_geoffroyi_b.tarseq_2582                           I 1 C 0
s Ateles_belzebuth.k141_1348307                             61656 26 +     85812 T-T---TTTCTTT-T-----TT-----CC-----TGTGT--GTTT-A--T-A
i Ateles_belzebuth.k141_1348307                         I 1 C 0
s Ateles_chamek.k141_1072810                                12669 26 +     89302 T-T---TTTCTTT-T-----TT-----CC-----TGTGT--GTTT-A--T-A
i Ateles_chamek.k141_1072810                            I 1 C 0
s Ateles_geoffroyi_a.k141_1300742                             17172 26 -     58268 T-T---TTTCTTT-T-----TT-----CC-----TGTGT--GTTT-A--T-A
i Ateles_geoffroyi_a.k141_1300742                         I 1 C 0
s Ateles_marginatus.k141_899112                             65164 26 +    119057 T-T---TTTCTTT-T-----TT-----CC-----TGTGT--GTTT-A--T-A
i Ateles_marginatus.k141_899112                         I 1 C 0
s Ateles_paniscus.k141_1631200                               7135 26 -     25888 T-T---TTTCTTT-T-----TT-----CC-----TGTGT--GTTT-A--T-A
i Ateles_paniscus.k141_1631200                          I 1 C 0
s Avahi_laniger.k141_2840928                                 7651 23 -     16375 T-T---TTC-T---T------T-----CC-----TGAGTT-GGTT-A--T-A
i Avahi_laniger.k141_2840928                            I 1 C 0
s Avahi_peyrierasi.k141_798820                               1267 23 +      6337 T-T---TTC-T---T------T-----CC-----TGAGTT-GGTT-A--T-A
i Avahi_peyrierasi.k141_798820                          I 1 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26381175 18 +  51448160 T-T---TTC-T---T-----CC-----A------TGG------AT-A--T-A
i Balaenoptera_acutorostrata.KI537095.1                 I 1 C 0
s Balaenoptera_bonaerensis.DF502048.1                        6347 18 -     13118 T-T---TTC-T---T-----CC-----A------TGG------AT-A--T-A
i Balaenoptera_bonaerensis.DF502048.1                   I 1 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   44218 18 -     72089 T-T---TTC-T---T-----CC-----A------AGG------AT-A--C-A
i Beatragus_hunteri.BeaHun_scaffold_21644               I 1 C 0
s Bison_bison.KN264915.1                                  6560841 18 +   6870073 t-t---ttc---t-t-----cc-----a------agg------ac-a--c-a
i Bison_bison.KN264915.1                                I 1 C 0
s Bos_indicus.CM003021.1                                138140956 18 - 161108492 t-t---ttc---t-t-----cc-----a------agg------ac-a--c-a
i Bos_indicus.CM003021.1                                I 1 C 0
s Bos_mutus.JH883513.1                                     573497 18 -    998990 t-t---ttc---t-t-----cc-----a------agg------ac-a--c-a
i Bos_mutus.JH883513.1                                  I 1 C 0
s Bos_taurus.CM000177.6                                 136296689 18 - 158972876 t-t---ttc---t-t-----cc-----a------agg------ac-a--c-a
i Bos_taurus.CM000177.6                                 I 1 C 0
s Bubalus_bubalis.KI419065.1                              1233770 18 -   1914593 t-t---ttc---t-t-----cc-----a------agg------ac-a--c-a
i Bubalus_bubalis.KI419065.1                            I 1 C 0
s Cacajao_ayresi.k141_724503                               115022 26 -    171031 T-T---TTTCTTT-T-----TT-----CT-----TGGGT--GGTT-A--T-A
i Cacajao_ayresi.k141_724503                            I 1 C 0
s Cacajao_calvus.k141_96166                                 14051 26 +    125063 T-T---TTTCTTT-T-----TT-----CT-----TGGGT--GGTT-A--T-A
i Cacajao_calvus.k141_96166                             I 1 C 0
s Cacajao_hosomi.k141_303789                                16094 26 -    216513 T-T---TTTCTTT-T-----TT-----CT-----TGGGT--GGTT-A--T-A
i Cacajao_hosomi.k141_303789                            I 1 C 0
s Cacajao_melanocephalus.k141_1160263                        8637 26 -    134917 T-T---TTTCTTT-T-----TT-----CT-----TGGGT--GGTT-A--T-A
i Cacajao_melanocephalus.k141_1160263                   I 1 C 0
s Camelus_bactrianus.KN276303.1                           3220523 16 -   8989139 ------TTC-T---T-----CC-----A------TGT------GT-A--T-A
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           398224 16 -  15254737 ------TTC-T---T-----CC-----A------TGT------GT-A--T-A
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2973960 16 +   6889770 ------TTC-T---T-----CC-----A------TGT------GT-A--T-A
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11520688 19 +  39901454 T-T---TTC-T---C-----CC-----C------TGGG-----AC-G--T-A
i CanFam4.chr31                                         I 1 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   15713 19 +     87036 T-T---TTC-T---C-----CC-----C------TGGG-----AC-G--T-A
i Canis_lupus_VD.CanFam_VD_scaffold_16982               I 1 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11267357 19 -  35597290 T-T---TTC-T---C-----CC-----C------TGGG-----AC-G--T-A
i Canis_lupus_dingo.QKWQ01001993.1                      I 1 C 0
s Canis_lupus_familiaris.chr31                           11089890 19 +  39895921 T-T---TTC-T---C-----CC-----C------TGGG-----AC-G--T-A
i Canis_lupus_familiaris.chr31                          I 1 C 0
s Canis_lupus_orion.HG994411.1                           16456903 19 -  44759192 T-T---TTC-T---C-----CC-----C------TGGG-----AC-G--T-A
i Canis_lupus_orion.HG994411.1                          I 1 C 0
s Capra_aegagrus.CM003214.1                              21326183 18 + 157394656 t-t---ttc---t-t-----cc-----a------agg------at-a--c-a
i Capra_aegagrus.CM003214.1                             I 1 C 0
s Capra_hircus.CM004562.1                               135707411 18 - 157403528 t-t---ttc---t-t-----cc-----a------agg------at-a--c-a
i Capra_hircus.CM004562.1                               I 1 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               60723 19 +     67245 T-T---TTC-T---T-----CC-----A------TGGG-----CT-A--T-A
i Carollia_perspicillata.CarPer_scaffold_4436           I 1 C 0
s Castor_canadensis.CasCan_scaffold_47037                   32089 17 +     33760 --------------T-----CC-----C------TAAGTT-GATC-A--T-A
i Castor_canadensis.CasCan_scaffold_47037               I 2 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   159855  9 -    276539 ---------------------------A------TGG------AT-T--T-A
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18891866 17 -  29618158 --------------T-----TT-----CC-----TGAGT--GGTT-A--T-A
i Cebus_albifrons.Contig22                              I 5 C 0
s Cebus_olivaceus.k141_93739                                 9410 17 -     26817 --------------T-----TT-----CC-----TGAGT--GGTT-A--T-A
i Cebus_olivaceus.k141_93739                            I 5 C 0
s Cebus_unicolor.k141_239009                                13653 17 +     25043 --------------T-----TT-----CC-----TGAGT--GGTT-A--T-A
i Cebus_unicolor.k141_239009                            I 5 C 0
s Ceratotherium_simum.JH767818.1                          4364891 19 +   7569818 T-T---TTG-T---T-----CT-----C------TGGA-----AT-A--T-A
i Ceratotherium_simum.JH767818.1                        I 1 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         4648 19 -      9338 T-T---TTG-T---T-----CT-----C------TGGA-----AT-A--T-A
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    I 1 C 0
s Cercocebus_atys.KQ010443.1                              6556631 24 +   6739814 t-t---ttt---t-c-----cc-----tc-----tgggtt-GGTT-A--T-A
i Cercocebus_atys.KQ010443.1                            I 1 C 0
s Cercocebus_chrysogaster.k141_2328246                      28105 24 +     60454 T-T---TTT-T---C-----CC-----TC-----TGGGTT-GGTT-A--T-A
i Cercocebus_chrysogaster.k141_2328246                  I 1 C 0
s Cercocebus_lunulatus.k141_4634644                          3312 24 -     21101 T-T---TTT-T---C-----CC-----TC-----TGGGTT-GGTT-A--T-A
i Cercocebus_lunulatus.k141_4634644                     I 1 C 0
s Cercocebus_torquatus.k141_3969582                         60622 24 -    107033 T-T---TTT-T---C-----CC-----TC-----TGGGTT-GGTT-A--T-A
i Cercocebus_torquatus.k141_3969582                     I 1 C 0
s Cercopithecus_ascanius.k141_4123525                        3501 24 -     17608 T-T---TTT-T---C-----CC-----TC-----TGGGTT-GGTT-A--T-A
i Cercopithecus_ascanius.k141_4123525                   I 1 C 0
s Cercopithecus_cephus.k141_3893260                           660 24 +     45019 T-T---TTTC----C-----CC-----TC-----TGGGTT-GGTT-A--T-A
i Cercopithecus_cephus.k141_3893260                     I 1 C 0
s Cercopithecus_diana.k141_2561715                            744 24 +     15177 T-T---TTT-T---C-----CC-----TC-----TGGGTT-GGTT-A--T-A
i Cercopithecus_diana.k141_2561715                      I 1 C 0
s Cercopithecus_hamlyni.k141_129805                          3544 24 +     16677 T-T---TTT-T---C-----TC-----TC-----TGGGTT-GGTT-A--T-A
i Cercopithecus_hamlyni.k141_129805                     I 1 C 0
s Cercopithecus_lowei.k141_623764                           25715 23 +     35983 T-T---TTTC----C------C-----TC-----TGGGTT-GGTT-A--T-A
i Cercopithecus_lowei.k141_623764                       I 3 C 0
s Cercopithecus_albogularis.ctg51                              11992242 24 +  12117833 T-T---TTTC----C-----CC-----TC-----TGAGTT-GGTT-A--T-A
i Cercopithecus_albogularis.ctg51                             I 1 C 0
s Cercopithecus_mona.ctg12                               46479001 23 +  46592721 T-T---TTTC----C------C-----TC-----TGGGTT-GGTT-A--T-A
i Cercopithecus_mona.ctg12                              I 3 C 0
s Cercopithecus_neglectus.k141_2078027                      42554 24 -     45581 T-T---TTT-T---C-----CC-----TC-----TGGGTT-GGTT-A--T-A
i Cercopithecus_neglectus.k141_2078027                  I 1 C 0
s Cercopithecus_nictitans.k141_1129315                       3556 24 +     35577 T-T---TTTC----C-----CC-----TC-----TGAGTT-GGTT-A--T-A
i Cercopithecus_nictitans.k141_1129315                  I 1 C 0
s Cercopithecus_petaurista.k141_64532                        3329 24 -     25661 T-T---TTT-T---C-----CC-----TC-----TGGGTT-GGTT-A--T-A
i Cercopithecus_petaurista.k141_64532                   I 1 C 0
s Cercopithecus_pogonias.k141_3109732                        3309 23 -     17744 T-T---TTTC----C------C-----TC-----TGGGTT-GGTT-A--T-A
i Cercopithecus_pogonias.k141_3109732                   I 1 C 0
s Cercopithecus_roloway.k141_2263608                        22914 24 +     37128 T-T---TTT-T---C-----CC-----TC-----TGGGTT-GGTT-A--T-A
i Cercopithecus_roloway.k141_2263608                    I 1 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           3747 18 -      6963 T-T---TTC-T---T-----C------C------TAGA-----TT-G--T-A
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      I 1 C 0
s Cheirogaleus_major.k141_1157592                           59922 23 -     68416 T-T---TTT-T---T------C-----CC-----TGAGTT-GGTT-A--T-A
i Cheirogaleus_major.k141_1157592                       I 1 C 0
s Cheirogaleus_medius.k141_133808                            8974 23 +     13308 T-T---TTC-T---T------C-----CC-----TGAGTT-GGTT-A--T-A
i Cheirogaleus_medius.k141_133808                       I 1 C 0
s Cheracebus_lucifer.k141_619653                             6679 26 -     18223 T-T---TTTCTTT-T-----TT-----CC-----CGGGT--GGTT-A--T-A
i Cheracebus_lucifer.k141_619653                        I 1 C 0
s Cheracebus_lugens.k141_203936                             23697 26 +     25473 T-T---TTTCTTT-T-----TT-----CC-----CGGGT--GGTT-A--T-A
i Cheracebus_lugens.k141_203936                         I 1 C 0
s Cheracebus_regulus.k141_2128895                           42737 26 +     57117 T-T---TTTCTTT-T-----TT-----CC-----CGGGT--GGTT-A--T-A
i Cheracebus_regulus.k141_2128895                       I 1 C 0
s Cheracebus_torquatus.k141_315545                          47416 26 +     54541 T-T---TTTCTTT-T-----TT-----CC-----TGGGT--GGTT-A--T-A
i Cheracebus_torquatus.k141_315545                      I 1 C 0
s Chinchilla_lanigera.JH721867.1                         15962699 17 +  43084221 --------------t-----ta-----g------tGAGTT-GCTG-A--T-A
i Chinchilla_lanigera.JH721867.1                        I 2 C 0
s Chiropotes_israelita.k141_1189915                         72223 26 +    196370 T-T---TTTCTTT-T-----TT-----CT-----TGGGT--GGTT-A--T-A
i Chiropotes_israelita.k141_1189915                     I 1 C 0
s Chiropotes_sagulatus.k141_773804                          16403 26 +     40510 T-T---TTTCTTT-T-----TT-----CT-----TGGGT--GGTT-A--T-A
i Chiropotes_sagulatus.k141_773804                      I 1 C 0
s Chlorocebus_aethiops.ctg22                             15140911 24 -  15256731 T-T---TTT-T---C-----CC-----TC-----TGGGTT-GGTT-A--T-A
i Chlorocebus_aethiops.ctg22                            I 1 C 0
s Chlorocebus_pygerythrus.k141_1486215                      35520 24 -     53260 T-T---TTT-T---C-----CC-----TC-----TGGGTT-GGTT-A--T-A
i Chlorocebus_pygerythrus.k141_1486215                  I 1 C 0
s Chlorocebus_sabaeus.CM001963.2                        101146079 24 + 101219884 t-t---ttt---t-c-----cc-----tc-----tgggtt-GGTT-A--T-A
i Chlorocebus_sabaeus.CM001963.2                        I 1 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                17492 19 -     21363 T-T---TTC-T---T-----CT-----C------TGGA-----TT-G--C-A
i Choloepus_didactylus.ChoDid_scaffold_36182            I 1 C 0
s Choloepus_hoffmanni.KN194586.1                           762797 19 +    964067 T-T---TTC-T---T-----CT-----C------TGGA-----TT-G--C-A
i Choloepus_hoffmanni.KN194586.1                        I 1 C 0
s Colobus_angolensis.KN985967.1                          10888071 24 +  10971483 t-t---ttt---t-c-----cc-----tc-----tgcatt-GGTT-A--T-A
i Colobus_angolensis.KN985967.1                         I 1 C 0
s Colobus_guereza.LG08                                  147665999 24 + 156195979 T-T---TTT-T---C-----CC-----TC-----TGCATT-GGTT-A--T-A
i Colobus_guereza.LG08                                  I 1 C 0
s Colobus_polykomos.k141_1406057                            17982 24 +     23629 T-T---TTT-T---C-----CC-----TC-----TGCATT-GGTT-A--T-A
i Colobus_polykomos.k141_1406057                        I 1 C 0
s Condylura_cristata.JH655880.1                          60620554 18 +  78930452 T-A---TTC-T---T-----CT-----C------TG-A-----AT-A--T-A
i Condylura_cristata.JH655880.1                         I 1 C 0
s Cricetulus_griseus.LT883672.1                          53030121 24 +  72327488 --------------T-----TC-----C-TCCTGTGGGCT-GGTT-GTAT-C
i Cricetulus_griseus.LT883672.1                         I 2 I 108
s Crocidura_indochinensis.CroInd_scaffold_848148              531 19 +      1327 T-T---ATC---A-C-----TT-----C------TGGA-----AC-A--T-A
i Crocidura_indochinensis.CroInd_scaffold_848148        I 1 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            53027 19 -     70449 T-T---TTC-T---C-----CT-----C------TGGA-----AT-A--G-A
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 1 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 32057 16 -     67205 --------------T-----TA-----C------TGGGTT-AGTT-A--A--
i Ctenomys_sociabilis.CteSoc_scaffold_19489             I 2 C 0
s Dasypus_novemcinctus.JH568778.1                          184591 19 -   6883506 T-T---TTC-T---T-----CC-----C------TGGA-----TT-G--T-A
i Dasypus_novemcinctus.JH568778.1                       I 1 C 0
s Daubentonia_madagascariensis.ctg11                     16845786 23 +  31942871 T-T---CTC-T---T------C-----CC-----GGAGTT-GATT-A--T-A
i Daubentonia_madagascariensis.ctg11                    I 1 C 0
s Delphinapterus_leucas.KZ290064.1                       80037803 18 -  96802777 T-T---TTC-T---T-----CC-----A------TGG------AT-A--T-A
i Delphinapterus_leucas.KZ290064.1                      I 1 C 0
s Desmodus_rotundus.KZ672188.1                           18700009 21 -  18957592 T-T---TTC-T---T-----CC-----A------TGGG-----AT-ATAT-A
i Desmodus_rotundus.KZ672188.1                          I 1 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 323543 19 +    993696 T-T---TTG-T---T-----CT-----C------TGGA-----AT-A--T-A
i Dicerorhinus_sumatrensis.PEKH010003161.1              I 1 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   4195 19 +    151128 T-T---TTG-T---T-----CT-----C------TGGA-----AT-A--T-A
i Diceros_bicornis.DicBicMic_scaffold_9545              I 1 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   157898 17 +    228994 --------------T-----TA-----G------GGTGTT-GGTT-A--A-A
i Dinomys_branickii.DinBra_scaffold_1996                I 2 C 0
s Dipodomys_ordii.KN672545.1                              3657357  6 +   4240102 --------------t-----tc-----t------tt----------------
i Dipodomys_ordii.KN672545.1                            I 2 I 894
s Dipodomys_stephensi.DipSte_scaffold_285155                  285  6 -       736 --------------t-----tc-----t------tt----------------
i Dipodomys_stephensi.DipSte_scaffold_285155            I 12 N 0
s Eidolon_helvum.KE772537.1                                 13252 19 +     24177 t-t---ttc---t-t-----tt-----a------tgga-----at-a--t-a
i Eidolon_helvum.KE772537.1                             I 1 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1492456 18 +   1727528 C-T---TTC-T---T-----CC-----A------AGG------AT-A--C-A
i Elaphurus_davidianus.JRFZ01086400.1                   I 1 C 0
s Elephantulus_edwardii.JH947210.1                        7829700 19 +  15467074 t-t---ttc---t-t-----tc-----t------tgta-----tt-g--T-A
i Elephantulus_edwardii.JH947210.1                      I 1 C 0
s Ellobius_lutescens.LOEQ01003611.1                        240317  1 -    369425 ---------------------------------------------------C
i Ellobius_lutescens.LOEQ01003611.1                     I 131 I 109
s Ellobius_talpinus.LOJH01090055.1                           7461 26 -      7838 --------------t----ttc-----c-ttctttgggat-ggTTAATAC-C
i Ellobius_talpinus.LOJH01090055.1                      I 2 I 109
s Enhydra_lutris.KZ291749.1                              85873196 18 +  99434291 T-T---TCC-----C-----TT-----C------TGGG-----AT-A--T-A
i Enhydra_lutris.KZ291749.1                             I 1 C 0
s Eptesicus_fuscus.JH977687.1                             4707946 19 +   6522550 T-T---TCC-T---T-----CC-----A------TGGG-----AT-A--T-A
i Eptesicus_fuscus.JH977687.1                           I 1 C 0
s Equus_asinus.JREZ01000062.1                             5854181 19 -   7175178 T-T---CGC-T---T-----TT-----C------TGGA-----AT-A--T-A
i Equus_asinus.JREZ01000062.1                           I 1 C 0
s Equus_caballus.CM000402.2                              13352681 19 +  41866177 T-T---CGC-T---T-----TT-----C------TGGA-----AT-A--T-A
i Equus_caballus.CM000402.2                             I 1 C 0
s Equus_przewalskii.ATBW01073585.1                          14171 19 +     92910 T-T---CGC-T---T-----TT-----C------TGGA-----AT-A--T-A
i Equus_przewalskii.ATBW01073585.1                      I 1 C 0
s Erythrocebus_patas.Contig8                             48778090 24 -  48907691 T-T---TTT-T---C-----CC-----TC-----TGGGTT-GGTT-A--T-A
i Erythrocebus_patas.Contig8                            I 1 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          316015 18 +    330699 T-T---TTC-T---T-----CC-----A------TGG------AT-A--T-A
i Eschrichtius_robustus.EscRob_flattened_line_685       I 1 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             62471 18 +     89355 T-T---TTC-T---T-----CC-----A------TGG------AT-A--T-A
i Eubalaena_japonica.EubJap_flattened_line_7756         I 1 C 0
s Eulemur_albifrons.k141_715837                              5961 23 +     13586 T-T---TTC-T---T------C-----CC-----TGAGTT-GGTT-A--T-A
i Eulemur_albifrons.k141_715837                         I 1 C 0
s Eulemur_collaris.k141_311830                               5893 23 -      6809 T-T---TTC-T---T------C-----CC-----TGAGTT-GGTT-A--T-A
i Eulemur_collaris.k141_311830                          I 1 C 0
s Eulemur_coronatus.k141_3240342                            12367 23 +     36558 T-T---TTC-T---T------C-----CC-----TGAGTT-GGTT-A--T-A
i Eulemur_coronatus.k141_3240342                        I 1 C 0
s Eulemur_flavifrons.k141_903901                             8688 23 +     60246 T-T---TTC-T---T------C-----CC-----TGAGTT-GGTT-A--T-A
i Eulemur_flavifrons.k141_903901                        I 1 C 0
s Eulemur_fulvus.k141_653297                                12166 23 +    109717 T-T---TTC-T---T------C-----CC-----TGAGTT-GGTT-A--T-A
i Eulemur_fulvus.k141_653297                            I 1 C 0
s Eulemur_macaco.k141_747087                                  151 23 -     19505 T-T---TTC-T---T------C-----CC-----TGAGTT-GGTT-A--T-A
i Eulemur_macaco.k141_747087                            I 1 C 0
s Eulemur_mongoz.k141_825972                                16826 23 +     27497 T-T---TTC-T---T------C-----CC-----TGAGTT-GGTT-A--T-A
i Eulemur_mongoz.k141_825972                            I 1 C 0
s Eulemur_rubriventer.k141_411740                           19282 23 +     26808 T-T---TTC-T---T------C-----CC-----TGAGTT-GGTT-A--T-A
i Eulemur_rubriventer.k141_411740                       I 1 C 0
s Eulemur_rufus.k141_1620292                                34020 23 +     46535 T-T---TTC-T---T------C-----TC-----TGAGTT-GGTT-A--T-A
i Eulemur_rufus.k141_1620292                            I 1 C 0
s Eulemur_sanfordi.k141_186399                              16746 23 -     29447 T-T---TTC-T---T------C-----CC-----TGAGTT-GGTT-A--T-A
i Eulemur_sanfordi.k141_186399                          I 1 C 0
s Felis_catus.CM001386.2                                129893947 19 - 159252932 T-T---TTC-T---C-----CT-----C------TGAG-----AT-A--T-A
i Felis_catus.CM001386.2                                I 1 C 0
s Felis_catus_fca126.CM031420.1                         129281031 19 - 158578461 T-T---TTC-T---C-----CT-----C------TGAG-----AT-A--T-A
i Felis_catus_fca126.CM031420.1                         I 1 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 22171 19 +     52776 T-T---TTC-T---C-----CT-----C------TGGG-----AT-A--T-A
i Felis_nigripes.FelNig_flattened_line_8080             I 1 C 0
s Fukomys_damarensis.KN123630.1                          13892367 17 -  19261668 --------------T-----TG-----C------TAGGTT-GGTT-A--T-A
i Fukomys_damarensis.KN123630.1                         I 2 C 0
s Galago_moholi.ctg555                                     211822 24 -    847004 T-T---TTC-T---T-----CT-----TC-----TGAGTT-GATT-A--T-A
i Galago_moholi.ctg555                                  I 2 C 0
s Galago_senegalensis.k141_964197                           14196 24 -     43889 T-T---TTC-T---T-----CT-----TC-----TGAGTT-GATT-A--T-A
i Galago_senegalensis.k141_964197                       I 2 C 0
s Galagoides_demidoff.k141_1769638                          11262 24 +     27357 T-T---TTC-T---T-----CT-----TC-----TGAGAT-GGTT-A--T-A
i Galagoides_demidoff.k141_1769638                      I 1 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               157293 19 +    324696 G-T---TTC-T---T-----CC-----C------TG-----GGTT-A--T-A
i Galeopterus_variegatus.GalVar_scaffold_354            I 1 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    182237 18 -    189561 t-t---ttc---t-t-----cc-----a------agg------at-a--c-A
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 1 C 0
s Glis_glis.GliGli_scaffold_79770                           14763 17 -     18683 --------------T-----TC-----C------TGGGTT-GGTT-A--T-A
i Glis_glis.GliGli_scaffold_79770                       I 2 C 0
s Gorilla_beringei.k141_111300                               6671 24 -     14630 T-T---TTT-T---C-----CC-----CC-----TGGGTT-GGTT-A--T-A
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119653771 24 - 195582420 T-T---TTT-T---C-----CC-----CC-----TGGGTT-GGTT-A--T-A
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   78177 17 +    118900 --------------T-----TC-----C------TGGATT-GGCT-A--T-A
i Graphiurus_murinus.GraMur_scaffold_4493               I 2 C 0
s Hapalemur_alaotrensis.k141_1280836                         2751 23 +     10286 T-T---TTC-T---T------C-----CC-----TGAGTT-GGTT-A--T-A
i Hapalemur_alaotrensis.k141_1280836                    I 1 C 0
s Hapalemur_gilberti.k141_279011                             1231 23 -     11661 T-T---TTC-T---T------C-----CC-----TGAGTT-GGTT-A--T-A
i Hapalemur_gilberti.k141_279011                        I 1 C 0
s Hapalemur_griseus.k141_1387522                             6557 23 +     56096 T-T---TTC-T---T------C-----CC-----TGAGTT-GGTT-A--T-A
i Hapalemur_griseus.k141_1387522                        I 1 C 0
s Hapalemur_meridionalis.k141_186231                        29806 23 -     42470 T-T---TTC-T---T------C-----CC-----TGAGTT-GGTT-A--T-A
i Hapalemur_meridionalis.k141_186231                    I 1 C 0
s Hapalemur_occidentalis.k141_797938                        46434 23 -     54384 T-T---TTC-T---T------C-----CC-----TGAGTT-GGTT-A--T-A
i Hapalemur_occidentalis.k141_797938                    I 1 C 0
s Helogale_parvula.HelPar_flattened_line_22962              18222 19 +     53719 T-T---TTC---A-C-----CT-----C------TGGA-----AT-A--T-A
i Helogale_parvula.HelPar_flattened_line_22962          I 1 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                28472 18 -     91191 T-T---TTC-T---T-----CC-----A------AGG------AT-A--C-A
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 1 C 0
s Heterocephalus_glaber.JH602058.1                        2552090 17 +  31725842 --------------T-----TA-----C------AGGGTT-GTTT-A--T-A
i Heterocephalus_glaber.JH602058.1                      I 2 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              148100 16 +    277961 ------TTC-T---T-----CC-----A------TGG------AT-A--T-A
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      279409 19 -    477199 T-T---TTC-T---T-----CC-----C------TGGG-----AT-A--T-A
i Hipposideros_armiger.JXIK01001085.1                   I 1 C 0
s Hipposideros_galeritus.HipGal_scaffold_345408               407 19 -       919 T-T---TTC-T---T-----CC-----C------TGGG-----AT-A--T-A
i Hipposideros_galeritus.HipGal_scaffold_345408         I 1 C 0
s Hoolock_leuconedys.ctg79                                      6361 24 -   7690867 T-T---TTT-T---T-----TC-----CC-----TGGGTT-GGTT-A--T-A
i Hoolock_leuconedys.ctg79                                 I 1 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 18293 19 -     67322 C-T---TTT-T---C-----CT-----C------TGGA-----AT-A--T-A
i Hyaena_hyaena.HyaHya_flattened_line_20729             I 1 C 0
s Hylobates_abbotti.k141_164775                              1144 24 -      2073 T-T---TTT-T---T-----TC-----CC-----TGGGTT-GGTT-A--T-A
i Hylobates_abbotti.k141_164775                         I 3 C 0
s Hylobates_agilis.k141_55853                                 729 24 -      1487 T-T---TTT-T---T-----CC-----CC-----TGGGTT-GGTT-A--T-A
i Hylobates_agilis.k141_55853                           I 3 I 23
s Hylobates_klossii.k141_468230                               697 27 +      5464 T-TATTTTT-T---T-----CC-----CC-----TGGGTT-GGTT-A--T-A
i Hylobates_klossii.k141_468230                         I 34 I 298
s Hylobates_pileatus_b.ContigUN                                 14626049 24 -  25970782 T-T---TTT-T---T-----TC-----CC-----TGGGTT-GGTT-A--T-A
i Hylobates_pileatus_b.ContigUN                                I 1 C 0
s Hylobates_muelleri.k141_950183                              745 24 +      2027 T-T---TTT-T---T-----TC-----CC-----TGGGTT-GGTT-A--T-A
i Hylobates_muelleri.k141_950183                        I 1 C 0
s Hylobates_pileatus_a.tarseq_592                             35209 24 -     60944 T-T---TTT-T---T-----TC-----CC-----TGGGTT-GGTT-A--T-A
i Hylobates_pileatus_a.tarseq_592                         I 1 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     7156 17 +     22540 --------------T-----TA-----C------TGGGTT-GGTT-A--T-A
i Hystrix_cristata.HysCri_scaffold_50788                I 2 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7126842 18 +  13083262 --------------T-----CC-----C------TGAATTTGGTT-T--C-A
i Ictidomys_tridecemlineatus.JH393315.1                 I 2 C 0
s Indri_indri.k141_5141390                                   1284 23 -      3181 T-T---TTC-T---C------C-----CC-----TGGGTT-CATT-A--T-A
i Indri_indri.k141_5141390                              I 1 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              10009 18 +     17520 T-T---TTC-T---T-----CC-----A------TGG------AT-A--T-A
i Inia_geoffrensis.IniGeo_flattened_line_66725          I 1 C 0
s Jaculus_jaculus.JH727545.1                                 1941 22 -      4668 --------------t-----tccttccc------tgggct-gGTT-A--T-A
i Jaculus_jaculus.JH727545.1                            I 2 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               24611 18 +     37189 T-T---TTC-T---T-----CC-----A------TGG------AT-A--T-A
i Kogia_breviceps.KogBre_flattened_line_35920           I 1 C 0
s Lagothrix_lagothricha.k141_12968                          51254 26 -    147782 T-T---TTTCTTT-T-----TT-----CC-----TGTGT--GTTT-A--T-A
i Lagothrix_lagothricha.k141_12968                      I 1 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    4616 19 +     26176 T-T---TCA-T---T-----CT-----A------TGGG-----AT-A--T-A
i Lasiurus_borealis.LasBor_scaffold_59542               I 1 C 0
s Lemur_catta.scaffold_1                                258408109 23 - 285822530 T-T---TTC-T---T------C-----CC-----AGAGTT-GGTT-A--T-A
i Lemur_catta.scaffold_1                                I 1 C 0
s Lepilemur_ankaranensis.k141_884009                        24860 23 +     39228 T-T---TTC-T---T------C-----CC-----TGAATT-GGTT-A--T-A
i Lepilemur_ankaranensis.k141_884009                    I 1 C 0
s Lepilemur_dorsalis.k141_134267                            54246 23 +     63517 T-T---TTC-T---T------C-----CC-----TGAATT-GGTT-A--T-A
i Lepilemur_dorsalis.k141_134267                        I 1 C 0
s Lepilemur_ruficaudatus.k141_617879                        79508 23 +    116806 T-T---TTC-T---T------C-----CC-----TGAATT-GGTT-A--T-A
i Lepilemur_ruficaudatus.k141_617879                    I 1 C 0
s Lepilemur_septentrionalis.k141_578524                     32499 23 -     33031 T-T---TTC-T---T------C-----CC-----TGAATT-GGTT-A--T-A
i Lepilemur_septentrionalis.k141_578524                 I 1 C 0
s Leptonychotes_weddellii.KB714749.1                      3086975 18 -   3498232 T-T---TCC-----C-----TT-----C------TGGG-----AT-A--T-A
i Leptonychotes_weddellii.KB714749.1                    I 1 C 0
s Lepus_americanus.LepAme_scaffold_62849                    14312 23 +     22452 T-T---GTC---A-T-----CT-----C------TGAGTT-AGCT-G--A-A
i Lepus_americanus.LepAme_scaffold_62849                I 1 C 0
s Lipotes_vexillifer.KE558548.1                            136965 18 +   3060487 T-T---TTC-T---T-----CC-----A------TGG------AT-A--T-A
i Lipotes_vexillifer.KE558548.1                         I 1 C 0
s Lophocebus_aterrimus.ctg55                             19249708 24 +  19376315 T-T---TTT-T---C-----CC-----TC-----TGGGTT-GGTT-A--T-A
i Lophocebus_aterrimus.ctg55                            I 1 C 0
s Loris_lydekkerianus.k141_550999                           11558 17 +     84689 --------------------CT-----TT-----TGAGTA-GGTT-A--T-A
i Loris_lydekkerianus.k141_550999                       I 3 C 0
s Loris_tardigradus.ctg97                                 3779307 17 +   6799190 --------------------CT-----TT-----TGAGTA-GGTT-A--T-A
i Loris_tardigradus.ctg97                               I 3 C 0
s Loxodonta_africana.GL010040.1                          20595808 19 -  62548349 C-T---TTC-T---T-----CC-----C------AGCA-----AT-A--T-A
i Loxodonta_africana.GL010040.1                         I 1 C 0
s Lycaon_pictus.CM007556.1                               11089346 19 +  39895028 T-T---TTC-T---C-----CC-----C------TGGG-----AN-G--T-A
i Lycaon_pictus.CM007556.1                              I 1 C 0
s Macaca_arctoides.k141_2201161                             21465 24 +     74745 T-T---TTT-T---C-----CC-----TC-----TGGGTT-GGTT-A--T-A
i Macaca_arctoides.k141_2201161                         I 1 C 0
s Macaca_assamensis.Contig65                             12707925 24 +  12821369 T-T---TTT-T---C-----CC-----TC-----TGGGTT-GGTT-A--T-A
i Macaca_assamensis.Contig65                            I 1 C 0
s Macaca_cyclopis.k119_883699                                 503 24 -     26467 T-T---TTT-T---C-----CC-----TC-----TGGGTT-GGTT-A--T-A
i Macaca_cyclopis.k119_883699                           I 1 C 0
s Macaca_fascicularis.k141_155037                           48370 24 +     63263 T-T---TTT-T---C-----CC-----TC-----TGGGTT-GGTT-A--T-A
i Macaca_fascicularis.k141_155037                       I 1 C 0
s Macaca_fuscata.k119_938422                                  480 24 -     26361 T-T---TTT-T---C-----CC-----TC-----TGGGTT-GGTT-A--T-A
i Macaca_fuscata.k119_938422                            I 1 C 0
s Macaca_leonina.k141_467472                                 3657 24 -      7381 T-T---TTT-T---C-----CC-----TC-----TGGGTT-GGTT-A--T-A
i Macaca_leonina.k141_467472                            I 1 C 0
s Macaca_maura.k141_251854                                  46895 24 -     79256 T-T---TTT-T---C-----CC-----TC-----TGGGTT-GGTT-A--T-A
i Macaca_maura.k141_251854                              I 1 C 0
s Macaca_mulatta.NC_041755.1                            196036997 24 + 196197964 t-t---ttt---t-c-----cc-----tc-----tgggtt-GGTT-A--T-A
i Macaca_mulatta.NC_041755.1                            I 1 C 0
s Macaca_nemestrina.KQ004885.1                           11447163 24 +  11645122 t-t---ttt---t-c-----cc-----tc-----tgggtt-GGTT-A--T-A
i Macaca_nemestrina.KQ004885.1                          I 1 C 0
s Macaca_nigra.k141_282495                                   5849 24 -     46448 T-T---TTT-T---C-----CC-----TC-----TGGGTT-GGTT-A--T-A
i Macaca_nigra.k141_282495                              I 1 C 0
s Macaca_radiata.k141_3680256                                3515 24 -     13212 T-T---TTT-T---C-----CC-----TC-----TGGGTT-GGTT-A--T-A
i Macaca_radiata.k141_3680256                           I 1 C 0
s Macaca_siberu.k141_741907                                 17192 24 -     55006 T-T---TTT-T---C-----CC-----TC-----TGGGTT-GGTT-A--T-A
i Macaca_siberu.k141_741907                             I 1 C 0
s Macaca_silenus.Contig12                                43842298 24 +  43892939 T-T---TTT-T---C-----CC-----TC-----TGGGTT-GGTT-A--T-A
i Macaca_silenus.Contig12                               I 1 C 0
s Macaca_thibetana.k99_662710                               18479 24 -     24607 T-T---TTT-T---C-----CC-----TC-----TGGGTT-GGTT-A--T-A
i Macaca_thibetana.k99_662710                           I 1 C 0
s Macaca_tonkeana.k141_2870633                               5846 24 -     27140 T-T---TTT-T---C-----CC-----TC-----TGGGTT-GGTT-A--T-A
i Macaca_tonkeana.k141_2870633                          I 1 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                701968 19 +    802869 T-T---TTT-T---T-----AA-----A------TAGG-----AT-A--T-A
i Macroglossus_sobrinus.MacSob_scaffold_879             I 1 C 0
s Mandrillus_leucophaeus.scaffold125                     43438880 24 -  43563597 T-T---TTT-T---C-----CC-----TC-----TGGGTT-GGTT-A--T-A
i Mandrillus_leucophaeus.scaffold125                    I 1 C 0
s Mandrillus_sphinx.Contig144                             4451694 24 -   4543643 T-T---TTT-T---C-----CC-----TC-----TGGGTT-GGTT-A--T-A
i Mandrillus_sphinx.Contig144                           I 1 C 0
s Manis_javanica.JSZB01003966.1                            147050 19 +    252755 T-T---TTC-T---T-----CT-----C------TGGG-----AT-A--T-A
i Manis_javanica.JSZB01003966.1                         I 1 C 0
s Manis_pentadactyla.KN017078.1                             37193 19 +     58827 T-T---TTC-T---T-----CT-----C------TGGG-----AT-A--T-A
i Manis_pentadactyla.KN017078.1                         I 1 C 0
s Marmota_marmota.CZRN01000005.1                         36874762 18 +  64221397 --------------T-----CC-----A------TGAATTTGGTT-T--C-A
i Marmota_marmota.CZRN01000005.1                        I 2 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             2013 18 -     87323 T-T---TCC-----C-----TT-----C------TGGG-----AT-A--T-A
i Mellivora_capensis.MelCap_flattened_line_15433        I 1 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               14218 22 +     15977 --------------T-----AT-----C-TTCTTTGGGGT-ATTT-A--T-C
i Meriones_unguiculatus.MerUng_scaffold_52233           I 2 I 108
s Mesocricetus_auratus.KB708139.1                         1047928 24 -  26018355 --------------T-----TC-----C-TCCTCTGGGCT-GGTT-GTAT-C
i Mesocricetus_auratus.KB708139.1                       I 2 I 106
s Mesoplodon_bidens.MesBid_scaffold_475714                    112 18 +       551 T-T---TTC-T---T-----CC-----A------TGG------AT-A--T-A
i Mesoplodon_bidens.MesBid_scaffold_475714              I 1 C 0
s Microcebus_murinus.CM007691.1                          16511142 22 +  47401472 T-T---TTC-T---T------C-----CC-----TGAGT--GGTT-A--T-A
i Microcebus_murinus.CM007691.1                         I 1 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  39298 18 -     48017 C-T----TC-T---C-----CC-----T------TCTC-----GT-A--T-A
i Microgale_talazaci.MicTal_scaffold_34660              I 1 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               23902 19 -     32043 T-T---TTCC----T-----CC-----A------TGGG-----AT-A--T-A
i Micronycteris_hirsuta.MicHir_scaffold_37978           I 1 C 0
s Microtus_ochrogaster.CM001673.1                        22820651 25 -  98408828 --------------T-----TC-----C-TTCTTTGGGCT-GGTTAAtat-c
i Microtus_ochrogaster.CM001673.1                       I 2 I 109
s Miniopterus_natalensis.LDJU01000022.1                   8211979 19 +  10048721 C-T---TTC-T---T-----CC-----A------AGGG-----AT-A--G-A
i Miniopterus_natalensis.LDJU01000022.1                 I 1 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            36468 19 +     45743 C-T---TTC-T---T-----CC-----A------AGGG-----AT-A--G-A
i Miniopterus_schreibersii.MinSch_scaffold_24116        I 1 C 0
s Miopithecus_ogouensis.k141_2935907                         3441 24 +     29742 T-T---TTT-T---C-----CC-----TC-----TGGGTT-GGTT-A--T-A
i Miopithecus_ogouensis.k141_2935907                    I 1 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        12502 18 -    104932 T-T---TCC-----C-----TT-----C------TGGG-----AT-A--T-A
i Mirounga_angustirostris.MirAng_flattened_line_8852    I 1 C 0
s Mirza_zaza.k141_226143                                     6531 22 +      8497 T-T---TTC-T---T------C-----CC-----TGAGT--GGTT-A--T-A
i Mirza_zaza.k141_226143                                I 1 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 147393 18 +    154973 T-T---TTC-T---T-----CC-----A------TGG------AT-A--T-A
i Monodon_monoceros.MonMon_M_scaffold_5598              I 1 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                162436 19 +    265003 T-T---TTC-T---T-----CC-----A------TGGC-----AT-A--T-A
i Mormoops_blainvillei.MorMeg_scaffold_2952             I 1 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  2487 18 -     19904 T-T---TTC-T---T-----CC-----A------AGG------AT-A--C-A
i Moschus_moschiferus.MosMos_scaffold_78805             I 1 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  145921 19 -    168139 T-T---TTC---A-C-----CT-----C------TGGA-----AT-A--T-A
i Mungos_mungo.MunMun_flattened_line_8729               I 1 C 0
s Murina_feae.MurFea_scaffold_2254                          23424 19 -    100666 T-T---TCC-T---T-----CC-----A------TGGA-----AT-A--T-A
i Murina_feae.MurFea_scaffold_2254                      I 1 C 0
s Mus_caroli.LT608236.1                                  70767619 24 +  92629107 --------------t-----tc-----c-ttgtttgaaCT-GGTT-ATAT-C
i Mus_caroli.LT608236.1                                 I 3 I 112
s Mus_musculus.chr16                                     75490699 24 +  98207768 --------------t-----tc-----c-ttctttgaacT-GGTT-ATAT-C
i Mus_musculus.chr16                                    I 6 I 112
s Mus_pahari.LT608305.1                                  67556898 24 +  89017189 --------------t-----tc-----c-ttctttgaact-GGTT-ATAT-C
i Mus_pahari.LT608305.1                                 I 3 I 112
s Mus_spretus.CM004110.1                                 74333434 24 +  97876770 --------------t-----tc-----c-ttctttgaact-GGTT-ATAT-C
i Mus_spretus.CM004110.1                                I 5 I 112
s Muscardinus_avellanarius.MusAve_scaffold_9643             13274 17 +     98495 --------------T-----TC-----C------TGGGTT-GGTT-A--T-A
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 2 C 0
s Mustela_putorius.JH417978.1                             4425379 18 -  28371801 T-T---TCC-----C-----TT-----C------TGGG-----AT-a--t-a
i Mustela_putorius.JH417978.1                           I 1 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     91383 17 -    117718 --------------T-----CC-----C------TGGGTT-AGTT-A--A-A
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 2 C 0
s Myotis_brandtii.KE161952.1                               970285 19 +   8389877 t-t---tCC-T---T-----CC-----A------TGGG-----AT-A--T-A
i Myotis_brandtii.KE161952.1                            I 1 C 0
s Myotis_davidii.KB114863.1                               5021710 19 +   6462685 t-t---tcC-T---T-----CC-----A------TGGG-----AT-A--T-A
i Myotis_davidii.KB114863.1                             I 1 C 0
s Myotis_lucifugus.GL429887.1                             3467788 19 -   3747815 t-t---tCC-T---T-----CC-----A------TGGG-----AT-A--T-A
i Myotis_lucifugus.GL429887.1                           I 1 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        13031 19 +     66751 T-T---TCC-T---T-----CC-----A------TGGC-----AT-A--T-A
i Myotis_myotis.MyoMyo_scaffold_6123                    I 1 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             6038 19 -      8794 T-T---TTC-T---T-----CT-----C------TGGA-----TT-G--T-A
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        I 1 C 0
s Nasalis_larvatus.k141_153429                               9919 23 +     48152 --T---TTT-T---C-----CC-----TC-----TGCGTT-GGTT-A--T-A
i Nasalis_larvatus.k141_153429                          I 1 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4485892 18 -  14209539 T-T---TCC-----C-----TT-----C------TGGG-----AT-A--T-A
i Neomonachus_schauinslandi.NINY01007774.1              I 1 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3952005 18 -   4490290 T-T---TTC-T---T-----CC-----A------TGG------AT-A--T-A
i Neophocaena_asiaeorientalis.KZ688543.1                I 1 C 0
s Nomascus_annamensis.k141_224620                             515 24 -      2316 T-T---TTT-T---T-----TC-----CC-----TGGGTT-GGTT-A--T-A
i Nomascus_annamensis.k141_224620                       I 1 C 0
s Nomascus_concolor.k141_226614                              2612 24 -      5092 T-T---TTT-T---T-----TC-----CC-----TGGGTT-GGTT-A--T-A
i Nomascus_concolor.k141_226614                         I 1 C 0
s Nomascus_gabriellae.k141_1032971                            186 24 -      1918 T-T---TTT-T---T-----TC-----CC-----TGGGTT-GGTT-A--T-A
i Nomascus_gabriellae.k141_1032971                      I 14 C 0
s Nomascus_siki_b.tarseq_80                             26364 24 -  18771707 T-T---TTT-T---T-----CC-----CC-----TGGGTT-GGTT-A--T-A
i Nomascus_siki_b.tarseq_80                         I 1 C 0
s Nomascus_siki_a.k141_1035055                                  924 25 -      3602 T-T---TTT-T---T------C-----CC--C-CTGGGTT-GGTT-A--T-A
i Nomascus_siki_a.k141_1035055                            I 35 I 459
s Nyctereutes_procyonoides.CAJHUB010000786.1                32130 19 +   3668941 T-T---TTC-T---C-----CC-----C------TGGG-----AC-G--T-A
i Nyctereutes_procyonoides.CAJHUB010000786.1            I 1 C 0
s Nycticebus_bengalensis.LG16                            65568012 17 -  95554990 --------------------CT-----TT-----TGAGTA-GGTT-A--T-A
i Nycticebus_bengalensis.LG16                           I 3 C 0
s Nycticebus_coucang.k141_2051882                            4738 17 +      6470 --------------------CT-----TT-----TGAGTA-GGTT-A--T-A
i Nycticebus_coucang.k141_2051882                       I 3 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65670345 17 +  89412551 --------------------CT-----TT-----TGAGTA-GGTT-A--T-A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     I 3 C 0
s Octodon_degus.JH651621.1                                3686881 18 +  10294119 --------------T-----TA-----C------TGGGTT-AGTT-G--AAA
i Octodon_degus.JH651621.1                              I 2 C 0
s Odobenus_rosmarus.KB229369.1                             680554 18 -   3126709 T-T---TCC-----C-----TT-----C------TGGG-----AT-A--T-A
i Odobenus_rosmarus.KB229369.1                          I 1 C 0
s Odocoileus_virginianus.KZ101650.1                       1080674 18 +   1425656 C-T---TTC-T---T-----TC-----A------AGG------AC-A--C-A
i Odocoileus_virginianus.KZ101650.1                     I 1 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         37963 18 +     78940 T-T---TTC-T---T-----CC-----A------AAG------AT-A--C-A
i Okapia_johnstoni.LVCL01S0017931.1                     I 1 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  125916 25 +    145789 --------------T-----TC-----C-TTCTCTGGGCT-GGTTAATAT-C
i Ondatra_zibethicus.OndZib_scaffold_6821               I 3 I 109
s Onychomys_torridus.OnyTor_scaffold_12578                  38096 24 +     62360 --------------T-----TC-----C-TTCTCTGGGGT-GGTT-ATAT-C
i Onychomys_torridus.OnyTor_scaffold_12578              I 2 I 109
s Orcinus_orca.KB316965.1                                 7225690 18 -   7562323 T-T---TTC-T---T-----CC-----A------TGG------AT-A--T-A
i Orcinus_orca.KB316965.1                               I 1 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              60926 19 -     66828 C-T---TTC-T---T-----CC-----C------TGCA-----GT-G--T-A
i Orycteropus_afer.OryAfe_flattened_line_13509          I 1 C 0
s Oryctolagus_cuniculus.CM000803.1                      141877349 24 + 163896628 T-T---GTC---A-T-----CT-----C------TGAGTT-AGCT-G--TAA
i Oryctolagus_cuniculus.CM000803.1                      I 1 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      309425 19 -    505867 T-T---TTC-T---C-----CC-----C------TGGG-----Ac-g--t-a
i Otocyon_megalotis.JAEUCK010005121.1                   I 1 C 0
s Otolemur_crassicaudatus.k141_505435                        1637 24 -     53940 T-T---TTC-T---T-----CT-----TC-----TGAGTT-GATT-A--T-A
i Otolemur_crassicaudatus.k141_505435                   I 1 C 0
s Otolemur_garnettii.GL873528.1                          18009618 24 -  38779656 t-t---ttc---t-t-----ct-----tc-----tgagtt-gATT-A--T-A
i Otolemur_garnettii.GL873528.1                         I 1 C 0
s Ovis_aries.CM001582.2                                 134078263 18 - 275406953 t-t---ttc---t-t-----cc-----a------agg------at-a--c-a
i Ovis_aries.CM001582.2                                 I 1 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      79478 18 +    140051 T-T---TTC-T---T-----CC-----A------AGG------AT-A--C-A
i Ovis_canadensis.OviCan_scaffold_6251                  I 1 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  35314 19 +    295523 T-T---TTC-T---C-----CT-----C------TGGG-----AT-A--T-A
i Panthera_onca.PanOnc_flattened_line_1615              I 1 C 0
s Panthera_pardus.KV860323.1                              3639064 19 +  18214204 T-T---TTC-T---C-----CT-----C------TGGG-----AT-A--T-A
i Panthera_pardus.KV860323.1                            I 1 C 0
s Panthera_tigris.KE721879.1                              5028740 19 -   6340057 T-T---TTC-T---C-----CT-----C------TGGG-----AT-A--T-A
i Panthera_tigris.KE721879.1                            I 1 C 0
s Pantholops_hodgsonii.KE114631.1                         1067112 18 -   1292953 T-T---TTC-T---T-----CC-----A------AGC------AT-A--C-A
i Pantholops_hodgsonii.KE114631.1                       I 1 C 0
s Papio_anubis.CM001492.2                               188157674 24 - 188283584 t-t---ttt---t-c-----cc-----tc-----tgggtT-GGTT-A--T-A
i Papio_anubis.CM001492.2                               I 1 C 0
s Papio_cynocephalus.k141_45376                               766 24 +     25005 T-T---TTT-T---C-----CC-----TC-----TGGGTT-GGTT-A--T-A
i Papio_cynocephalus.k141_45376                         I 1 C 0
s Papio_hamadryas.Contig15                               47515051 24 +  47705337 T-T---TTT-T---C-----CC-----TC-----TGGGTT-GGTT-A--T-A
i Papio_hamadryas.Contig15                              I 1 C 0
s Papio_kindae.k141_5458022                                 69041 24 -    104429 T-T---TTT-T---C-----CC-----TC-----TGGGTT-GGTT-A--T-A
i Papio_kindae.k141_5458022                             I 1 C 0
s Papio_papio.k141_979496                                    7570 24 +     14967 T-T---TTT-T---C-----CC-----TC-----TGGGTT-GGTT-A--T-A
i Papio_papio.k141_979496                               I 1 C 0
s Papio_ursinus.k141_1345919                                 3435 24 -      7628 T-T---TTT-T---C-----CC-----TC-----TGGGTT-GGTT-A--T-A
i Papio_ursinus.k141_1345919                            I 1 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    116798 19 -    135482 T-T---TTC-T---C-----CT-----C------TGAG-----AT-A--T-A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 I 1 C 0
s Perodicticus_ibeanus.k141_117958                           6322 24 -     23713 T-T---TTC-T---T-----CT-----TT-----TGAGTT-GGTT-A--T-A
i Perodicticus_ibeanus.k141_117958                      I 1 C 0
s Perodicticus_potto.k141_713187                            25636 24 -     27972 T-T---TTC-T---T-----CT-----TT-----TGAGTT-GGTT-A--T-A
i Perodicticus_potto.k141_713187                        I 1 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    14612 17 -     36578 --------------T-----TA-----C------TGGACT-GGTT-A--T-A
i Petromus_typicus.PetTyp_scaffold_33007                I 1 C 0
s Phocoena_phocoena.PhoPho_flattened_line_648925              294 18 -       346 T-T---TTC-T---T-----CC-----A------TGG------AT-A--T-A
i Phocoena_phocoena.PhoPho_flattened_line_648925        I 1 C 0
s Piliocolobus_badius.k141_1987485                           3448 27 -      5908 T-T---TTT-TTTCC-----CC-----TC-----TGCATT-GGTT-A--T-A
i Piliocolobus_badius.k141_1987485                      I 1 C 0
s Piliocolobus_gordonorum.k141_1270531                       4066 27 -     17985 T-T---TTT-TTCCC-----CC-----TC-----TGCATT-GGTT-A--T-A
i Piliocolobus_gordonorum.k141_1270531                  I 1 C 0
s Piliocolobus_kirkii.k141_929665                            3433 27 +      7694 T-T---TTT-TTCCC-----CC-----TC-----TGCATT-GGTT-A--T-A
i Piliocolobus_kirkii.k141_929665                       I 1 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26741917 27 +  26888534 t-t---ttttttc-c-----cc-----tc-----tgcatt-GGTT-A--T-A
i Piliocolobus_tephrosceles.PDMG02000036.1              I 1 C 0
s Pithecia_albicans.k141_991845                             44860 26 -     61926 T-T---TTTCTTT-T-----TT-----CT-----TGGGT--GGTT-A--T-A
i Pithecia_albicans.k141_991845                         I 1 C 0
s Pithecia_chrysocephala.k141_159118                        26243 26 +     78826 T-T---TTTCTTT-T-----TT-----CT-----TGGGT--GGTT-A--T-A
i Pithecia_chrysocephala.k141_159118                    I 1 C 0
s Pithecia_hirsuta.k141_1152968                             10291 26 -     15800 T-T---TTTCTTT-T-----TT-----CT-----TGGGT--GGTT-A--T-A
i Pithecia_hirsuta.k141_1152968                         I 1 C 0
s Pithecia_mittermeieri.k141_2119203                        13490 26 -     16101 T-T---TTTCTTT-T-----TT-----CT-----TGGGT--GGTT-A--T-A
i Pithecia_mittermeieri.k141_2119203                    I 1 C 0
s Pithecia_pissinattii.k141_1102319                          6719 26 +      9673 T-T---TTTCTTT-T-----TT-----CT-----TGGGT--GGTT-A--T-A
i Pithecia_pissinattii.k141_1102319                     I 1 C 0
s Pithecia_pithecia.tarseq_313                           13475719 26 -  19735023 T-T---TTTCTTT-T-----TT-----CT-----TGGGT--GGTT-A--T-A
i Pithecia_pithecia.tarseq_313                          I 1 C 0
s Pithecia_vanzolinii.k141_831006                           14622 26 -     31692 T-T---TTTCTTT-T-----TT-----CT-----TGGGT--GGTT-A--T-A
i Pithecia_vanzolinii.k141_831006                       I 1 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           6611 18 +     21690 T-T---TTC-T---T-----CC-----A------TGG------AT-A--T-A
i Platanista_gangetica.PlaMin_flattened_line_72990      I 1 C 0
s Plecturocebus_bernhardi.k141_959214                       23958 26 +     44506 T-T---TTTCTTT-T-----TT-----CC-----CGGGT--GGTT-A--T-A
i Plecturocebus_bernhardi.k141_959214                   I 1 C 0
s Plecturocebus_brunneus.k141_498086                        24171 26 +     67491 T-T---TTTCTTT-T-----TT-----CC-----TGGGT--GGTT-A--T-A
i Plecturocebus_brunneus.k141_498086                    I 1 C 0
s Plecturocebus_caligatus.k141_2539816                      14410 26 -     98129 T-T---TTTCTTT-T-----TT-----CC-----CGGGT--GGTT-A--T-A
i Plecturocebus_caligatus.k141_2539816                  I 1 C 0
s Plecturocebus_cinerascens.k141_744510                     24010 26 +    147771 T-T---TTTCTTT-T-----TT-----CC-----CGGGT--GGTT-A--T-A
i Plecturocebus_cinerascens.k141_744510                 I 1 C 0
s Plecturocebus_cupreus.k141_1145860                          646 26 -     43940 T-T---TTTCTTT-T-----TT-----CC-----CGGGT--GGTT-A--T-A
i Plecturocebus_cupreus.k141_1145860                    I 1 C 0
s Plecturocebus_dubius.k141_3565563                          4729 26 -     55515 T-T---TTTCTTT-T-----TT-----CC-----CGGGT--GGTT-A--T-A
i Plecturocebus_dubius.k141_3565563                     I 1 C 0
s Plecturocebus_grovesi.k141_242819                         24083 26 +    152463 T-T---TTTCTTT-T-----TT-----CC-----CGGGT--GGTT-A--T-A
i Plecturocebus_grovesi.k141_242819                     I 1 C 0
s Plecturocebus_hoffmannsi.k141_985533                       1800 26 -    119457 T-T---TTTCTTT-T-----TT-----CC-----CGGGT--GGTT-A--T-A
i Plecturocebus_hoffmannsi.k141_985533                  I 1 C 0
s Plecturocebus_miltoni.k141_841561                         13806 26 +    134592 T-T---TTTCTTT-T-----TT-----CC-----CGGGT--GGTT-A--T-A
i Plecturocebus_miltoni.k141_841561                     I 1 C 0
s Plecturocebus_moloch.k141_890597                          24393 26 -     75465 T-T---TTTCTTT-T-----TT-----CC-----CGGGT--GGTT-A--T-A
i Plecturocebus_moloch.k141_890597                      I 1 C 0
s Pongo_abelii.NDHI03003816.1                              188558 24 -    373494 T-T---TTTC----C-----CC-----CC-----TGGGTT-GGTT-A--T-A
i Pongo_abelii.NDHI03003816.1                           I 1 C 0
s Pongo_pygmaeus.ctg62                                   19809205 24 +  19899266 T-T---TTTC----C-----CC-----CC-----TGGGTT-GGTT-A--T-A
i Pongo_pygmaeus.ctg62                                  I 1 C 0
s Presbytis_comata.k141_672698                               7198 24 -     15069 T-T---TTT-T---C-----CC-----TC-----TGCGTT-GGTT-A--T-A
i Presbytis_comata.k141_672698                          I 1 C 0
s Presbytis_mitrata.k141_860013                              7313 24 +     14865 T-T---TTT-T---C-----CC-----TC-----TGCGTT-GGTT-A--T-A
i Presbytis_mitrata.k141_860013                         I 1 C 0
s Prolemur_simus.MPIZ01000048.1                           6849480 23 +  12164890 T-T---TTC-T---T------C-----CC-----TGAGTT-GGTT-A--T-A
i Prolemur_simus.MPIZ01000048.1                         I 1 C 0
s Propithecus_coquerelli.NW_012147863.1                     19654 23 -     30946 n-n---nnn---n-n------n-----nn-----nnnnnn-nnnn-n--n-n
i Propithecus_coquerelli.NW_012147863.1                 I 1 C 0
s Propithecus_coronatus.k141_1353159                         4559 23 +     11805 T-T---TTC-T---T------C-----CC-----TGAGTT-AGTT-A--T-A
i Propithecus_coronatus.k141_1353159                    I 1 C 0
s Propithecus_diadema.k141_577245                           43907 23 +     52369 T-T---TTC-T---T------C-----CC-----TGAGTT-GGTT-A--T-A
i Propithecus_diadema.k141_577245                       I 1 C 0
s Propithecus_edwardsi.k141_1317105                         36294 23 -     44753 T-T---TTC-T---T------C-----CC-----TGAGTT-GGTT-A--T-A
i Propithecus_edwardsi.k141_1317105                     I 1 C 0
s Propithecus_perrieri.k141_7554                            18217 23 +     27322 T-T---TTC-T---T------C-----CC-----TGAGTT-GGTT-A--T-A
i Propithecus_perrieri.k141_7554                        I 1 C 0
s Propithecus_tattersalli.k141_907138                       17851 23 -     53241 T-T---TTC-T---T------C-----CC-----TGAGTT-AGTT-A--T-A
i Propithecus_tattersalli.k141_907138                   I 1 C 0
s Propithecus_verreauxi.k141_158021                         40115 23 -     48185 T-T---TTC-T---T------C-----CC-----TGAGTT-GGTT-A--T-A
i Propithecus_verreauxi.k141_158021                     I 1 C 0
s Psammomys_obesus.NESX01026517.1                           36508 22 +     77221 --------------t-----tt-----c-ttctgtggggt-AGTT-A--T-C
i Psammomys_obesus.NESX01026517.1                       I 2 I 59
s Pteronotus_parnellii.KE867983.1                            5082 19 -     27784 T-T---TTC-T---T-----CC-----A------TGGG-----AT-A--T-A
i Pteronotus_parnellii.KE867983.1                       I 1 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        247690 18 -    344369 T-T---TCC-----C-----TC-----T------TGGG-----AT-A--T-A
i Pteronura_brasiliensis.PteBra_flattened_line_1343     I 1 C 0
s Pteropus_alecto.KB031157.1                             13246975 19 -  17261082 t-t---ttc---t-t-----tt-----a------tgag-----at-A--T-A
i Pteropus_alecto.KB031157.1                            I 1 C 0
s Pteropus_vampyrus.KN525959.1                             604926 19 -   3946241 T-T---TTC-T---T-----TT-----A------TGAG-----AT-A--T-A
i Pteropus_vampyrus.KN525959.1                          I 1 C 0
s Puma_concolor.QAVW01000427.1                          131535335 19 - 161321710 T-T---TTC-T---C-----CT-----C------TGGG-----AT-A--T-A
i Puma_concolor.QAVW01000427.1                          I 1 C 0
s Pygathrix_cinerea.k141_374971                             31301 25 +     56732 TTT---TTT-T---C-----CC-----TC-----TGCGTT-GGTT-A--C-A
i Pygathrix_cinerea.k141_374971                         I 1 C 0
s Pygathrix_nigripes_b.ctg79                                 6807795 25 +   6970761 TTT---TTT-T---C-----CC-----TC-----TGCGTT-GGTT-A--C-A
i Pygathrix_nigripes_b.ctg79                               I 1 C 0
s Pygathrix_nigripes_a.k141_101123                             7188 25 +     18040 TTT---TTT-T---C-----CC-----TC-----TGCGTT-GGTT-A--C-A
i Pygathrix_nigripes_a.k141_101123                        I 1 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                16786 18 +     68503 C-T---TTC-T---T-----TC-----A------AGG------AT-T--C-A
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 1 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1788852 18 +   2252614 T-T---TT--T---T-----CC-----A------TGAG-----AT-A--T-A
i Rhinolophus_sinicus.LVEH01000179.1                    I 1 C 0
s Rhinopithecus_bieti.k119_554384                            1585 24 -     17045 T-T---TTT-T---C-----CC-----TC-----TGCATT-GGTT-A--T-A
i Rhinopithecus_bieti.k119_554384                       I 1 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206379073 24 - 206558726 t-t---ttt---t-c-----cc-----tc-----tgcgtT-GGTT-A--T-A
i Rhinopithecus_roxellana.NC_044549.1                   I 1 C 0
s Rhinopithecus_strykeri.ctg4                            44857975 24 -  45163003 T-T---TTT-T---C-----CC-----TC-----TGCATT-GGTT-A--T-A
i Rhinopithecus_strykeri.ctg4                           I 1 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                20311 19 +    109198 T-T---TTC-T---T-----TT-----A------TGGG-----AT-A--T-A
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            I 1 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       8939 18 +     12214 T-T---TTC-T---T-----CC-----A------AGG------AT-A--C-A
i Saiga_tatarica.SaiTat_scaffold_82192                  I 1 C 0
s Saimiri_boliviensis.NW_024100938.1                     15673807 26 -  43202129 t-t---tttcttt-t-----tt-----cc-----tgggt--GGTT-A--G-A
i Saimiri_boliviensis.NW_024100938.1                    I 1 C 0
s Saimiri_cassiquiarensis.k141_808270                        5720 26 +     34089 T-T---TTTCTTT-T-----TT-----CC-----TGGGT--GGTT-A--T-A
i Saimiri_cassiquiarensis.k141_808270                   I 1 C 0
s Saimiri_macrodon.k141_2087127                              5662 26 -     60842 T-T---TTTCTTT-T-----TT-----CC-----TGGGT--GGTT-A--T-A
i Saimiri_macrodon.k141_2087127                         I 1 C 0
s Saimiri_oerstedii.k141_841116                              5755 26 +     67014 T-T---TTTCTTT-T-----TT-----CC-----TGGGT--GGTT-A--T-A
i Saimiri_oerstedii.k141_841116                         I 1 C 0
s Saimiri_sciureus.k141_1947592                              5733 26 +     60816 T-T---TTTCTTT-T-----TT-----CC-----TGGGT--GGTT-A--T-A
i Saimiri_sciureus.k141_1947592                         I 1 C 0
s Saimiri_ustus.k141_1282476                                 5670 26 -     76454 T-T---TTTCTTT-T-----TT-----CC-----TGGGT--GGTT-A--T-A
i Saimiri_ustus.k141_1282476                            I 1 C 0
s Sapajus_apella.ctg10                                   17342411 17 -  30362882 --------------T-----TT-----CC-----TGAGT--GGTT-A--T-A
i Sapajus_apella.ctg10                                  I 5 C 0
s Sapajus_macrocephalus.k141_966464                         21772 17 -     62485 --------------T-----TT-----CC-----TGAGT--GGTT-A--T-A
i Sapajus_macrocephalus.k141_966464                     I 5 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   37689 19 -    114521 T-T---TTC-T---T-----CT-----C------TGGA-----AT-A--T-A
i Scalopus_aquaticus.ScaAqu_scaffold_9300               I 1 C 0
s Semnopithecus_entellus.k141_1572367                        4805 24 +     15331 T-T---TTTC----C-----CC-----TC-----TGCGTT-GGTT-A--T-A
i Semnopithecus_entellus.k141_1572367                   I 1 C 0
s Semnopithecus_hypoleucos.k141_761524                      10180 24 +     20762 T-T---TTT-T---C-----CC-----TC-----TGCGTT-GGTT-A--T-A
i Semnopithecus_hypoleucos.k141_761524                  I 1 C 0
s Semnopithecus_johnii.k141_785014                         120185 24 +    130994 T-T---TTT-T---C-----CC-----TC-----TGCGTT-GGTT-A--T-A
i Semnopithecus_johnii.k141_785014                      I 1 C 0
s Semnopithecus_priam.k141_410937                           38964 24 +     46263 T-T---TTT-T---C-----CC-----TC-----TGCGTT-GGTT-A--T-A
i Semnopithecus_priam.k141_410937                       I 1 C 0
s Semnopithecus_schistaceus.k141_387461                     32109 24 +     42640 T-T---TTTC----C-----CC-----TC-----TGCGTT-GGTT-A--T-A
i Semnopithecus_schistaceus.k141_387461                 I 1 C 0
s Semnopithecus_vetulus.k141_1143185                        15132 23 +     30600 --T---TTT-T---C-----CC-----TC-----TGCGTT-GGTT-A--T-A
i Semnopithecus_vetulus.k141_1143185                    I 1 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  101258 22 -    120886 --------------T-----TC-----T-TCCTCTG--CT-GGTT-ATAT-C
i Sigmodon_hispidus.SigHis_scaffold_11332               I 2 I 109
s Solenodon_paradoxus.SolPar_flattened_line_1012            19886 19 +    739146 T-T---CTC-T---T-----CT-----G------TGGA-----AT-A--T-A
i Solenodon_paradoxus.SolPar_flattened_line_1012        I 1 C 0
s Sorex_araneus.JH798170.1                               17767450 19 -  27805282 T-T---ATC-T---T-----TT-----C------TGGA-----AC-A--T-G
i Sorex_araneus.JH798170.1                              I 1 C 0
s Spermophilus_dauricus.KZ294190.1                        2240758 18 +   2842873 --------------T-----CC-----C------TGAATTTGGTT-T--C-A
i Spermophilus_dauricus.KZ294190.1                      I 2 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             236065 18 -    276980 T-T---TCC-----C-----TT-----C------TGAG-----AT-A--T-A
i Spilogale_gracilis.SpiGra_flattened_line_905          I 1 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            28580 19 +     62062 T-T---TTC---A-C-----CT-----C------TGAA-----AT-A--T-A
i Suricata_suricatta.SurSur_flattened_line_20339        I 1 C 0
s Sus_scrofa.CM000824.4                                 189273088 18 + 218635234 T-T---TTC-T---T-----CC-----A------TGG------AT-A--T-A
i Sus_scrofa.CM000824.4                                 I 1 C 0
s Symphalangus_syndactylus.tarseq_24                        16309 23 -  13920577 T-T---TTT-----T-----TC-----CC-----TGGGTT-GGTT-A--T-A
i Symphalangus_syndactylus.tarseq_24                    I 1 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                1282 17 +     20549 ------TTC-T---T-----CC-----A------TGAG-----AT-A--C-A
i Tadarida_brasiliensis.TadBra_scaffold_61492           I 2 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               15704 19 +     45698 T-T---TTC-T---T-----CT-----C------TGGA-----TT-G--T-A
i Tamandua_tetradactyla.TamTet_scaffold_26877           I 1 C 0
s Tapirus_indicus.TapInd_scaffold_176                      808131 19 +   1148477 T-T---TTT-T---T-----CT-----C------TGTA-----AT-A--T-T
i Tapirus_indicus.TapInd_scaffold_176                   I 1 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  58844 19 +     99546 T-T---TTT-T---T-----CT-----C------TGTA-----AT-A--T-T
i Tapirus_terrestris.TapTer_scaffold_14939              I 1 C 0
s Theropithecus_gelada.CM009951.1                       194009202 24 - 194193292 t-t---ttt---t-c-----cc-----tc-----tgggtT-GGTT-A--T-A
i Theropithecus_gelada.CM009951.1                       I 1 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             39965 17 -     47444 --------------T-----TA-----C------TGGATT-AGTT-A--T-A
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         I 2 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  6485 18 +      6782 T-T---TTC-T---T-----C------C------TGGA-----CT-A--T-A
i Tolypeutes_matacus.TolMat_scaffold_269431             I 1 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  137061 19 -    259118 T-T---TTC-T---T-----TC-----A------TGAG-----AT-A--T-A
i Tonatia_saurophila.TonSau_scaffold_3334               I 1 C 0
s Trachypithecus_auratus.k141_738098                        28452 24 +     38948 T-T---TTT-T---C-----CC-----TC-----TGCGTT-GGTT-A--T-A
i Trachypithecus_auratus.k141_738098                    I 163 C 0
s Trachypithecus_crepusculus.k141_1588528                   22012 24 -     32910 T-T---TTT-T---C-----CC-----TC-----TGCGTT-GGTT-A--T-A
i Trachypithecus_crepusculus.k141_1588528               I 1 C 0
s Trachypithecus_cristatus.k141_1011511                      3913 24 -     12939 t-t---ttt---t-c-----cc-----tc-----tgcgtt-ggtt-a--t-a
i Trachypithecus_cristatus.k141_1011511                 I 490 C 0
s Trachypithecus_francoisi.k141_768164                       3341 24 -     14244 T-T---TTT-T---C-----CC-----TC-----TGCGTT-GGTT-A--T-A
i Trachypithecus_francoisi.k141_768164                  I 1 C 0
s Trachypithecus_geei.k141_670367                           44739 24 -     54611 T-T---TTT-T---C-----CC-----TC-----TGCGTT-GGTT-A--T-A
i Trachypithecus_geei.k141_670367                       I 1 C 0
s Trachypithecus_germaini.k141_868450                        2535 24 -     11566 T-T---TTT-T---C-----CC-----TC-----TGCGTT-GGTT-A--T-A
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     4719 24 -     15592 T-T---TTT-T---C-----CC-----TC-----TGCGTT-GGTT-A--T-A
i Trachypithecus_hatinhensis.k141_504423                I 1 C 0
s Trachypithecus_laotum.k141_760702                          3371 24 +     14371 T-T---TTT-T---C-----CC-----TC-----TGCGTT-GGTT-A--T-A
i Trachypithecus_laotum.k141_760702                     I 1 C 0
s Trachypithecus_leucocephalus.k141_381681                   1657 24 +     12481 T-T---TTT-T---C-----CC-----TC-----TGCGTT-GGTT-A--T-A
i Trachypithecus_leucocephalus.k141_381681              I 1 C 0
s Trachypithecus_melamera.k141_699241                        1532 24 -     24393 T-T---TTT-T---C-----CC-----TC-----TGCGTT-GGTT-A--T-A
i Trachypithecus_melamera.k141_699241                   I 1 C 0
s Trachypithecus_obscurus.k141_1115109                       6782 24 -     28054 T-T---TTT-T---C-----CC-----TC-----TGCGTT-GGTT-A--T-A
i Trachypithecus_obscurus.k141_1115109                  I 1 C 0
s Trachypithecus_phayrei.ctg3                            44661566 24 -  44834318 T-T---TTT-T---C-----CC-----TC-----TGCGTT-GGTT-A--T-A
i Trachypithecus_phayrei.ctg3                           I 1 C 0
s Trachypithecus_pileatus.k141_1022309                       3882 25 +     13828 TTT---TTT-T---C-----CC-----TC-----TGCGTT-GGTT-A--T-A
i Trachypithecus_pileatus.k141_1022309                  I 1 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   6132 18 +     90398 T-T---TTC-T---T-----CC-----A------AGG------AT-A--T-A
i Tragulus_javanicus.TraJav_scaffold_14717              I 1 C 0
s Trichechus_manatus.JH594618.1                          16086822 19 +  31416278 C-T---TTA-T---T-----CC-----C------TGCA-----GT-G--T-A
i Trichechus_manatus.JH594618.1                         I 1 C 0
s Tupaia_chinensis.KB320831.1                             2794381 23 -   3938065 T-T---TTCC----T-----AC-----C------TGAACT-ggtt-a--t-a
i Tupaia_chinensis.KB320831.1                           I 2 I 15
s Tupaia_tana.TupTan_flattened_line_68454                    6466 23 +     13056 T-T---TTCC----T-----AC-----C------TGAGCT-GGTT-A--T-A
i Tupaia_tana.TupTan_flattened_line_68454               I 2 I 15
s Tursiops_truncatus.MRVK01000923.1                      69314406 18 -  96451834 T-T---TTC-T---T-----CC-----A------TGG------AT-A--T-A
i Tursiops_truncatus.MRVK01000923.1                     I 1 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   8256 19 +     10241 T-T---TCC-T---T-----CT-----C------TGGA-----AT-G--C-A
i Uropsilus_gracilis.UroGra_scaffold_69449              I 1 C 0
s Ursus_maritimus.KK498671.1                              6515810 18 +  28682327 T-T---TCC-----C-----CT-----T------TGGG-----AT-A--T-A
i Ursus_maritimus.KK498671.1                            I 1 C 0
s Varecia_rubra.k141_432109                                  6115 23 -     20643 T-T---TTT-T---T------C-----CC-----TGCATT-GGTT-A--T-A
i Varecia_rubra.k141_432109                             I 1 C 0
s Varecia_variegata.k141_775891                             25650 23 -     33872 T-T---TTT-T---T------C-----CC-----TGCATT-GGTT-A--T-A
i Varecia_variegata.k141_775891                         I 1 C 0
s Vicugna_pacos.KN269600.1                                1525628 16 -   2331223 ------TTC---t-t-----cc-----a------tgt------at-a--t-a
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                139525 19 -    281493 T-T---TTC-T---C-----CC-----T------TGGG-----AC-G--T-A
i Vulpes_lagopus.VulLag_flattened_line_2045             I 1 C 0
s Xerus_inauris.XerIna_scaffold_7898                       127874 17 -    134049 --------------T-----CC-----C------TGAATT-GGTT-T--T-A
i Xerus_inauris.XerIna_scaffold_7898                    I 2 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        215281 18 -    227762 T-T---TCC-----C-----TC-----C------TGGG-----AT-A--T-A
i Zalophus_californianus.ZalCal_flattened_line_4097     I 1 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     16811 22 -     20485 --------------T-----CCCTTCCC------TGGGCT-GGTT-A--A-G
i Zapus_hudsonius.ZapHud_scaffold_64392                 I 2 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           7898 18 -      8775 T-T---TTC-T---T-----CC-----A------TGG------AT-A--T-A
i Ziphius_cavirostris.ZipCav_flattened_line_127025      I 1 C 0
e Ochotona_princeps.JH802095.1                            4996729 2205 -  23139505 I
e Perognathus_longimembris.PerPac_flattened_line_19359        892 695 +     49596 I
e Procavia_capensis.ProCapCap_scaffold_149274                2467 1156 -      9567 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Megaderma_lyra.MegLyr_scaffold_3562                       64783 239 -    234502 I
e Heterohyrax_brucei.HetBruBak_scaffold_25354               61360 1157 +     73687 I
e Echinops_telfairi.JH980316.1                           22999931  2 -  44670279 I
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1008 325 -      5782 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19677 266 -    119109 I
e Tarsius_wallacei.k141_48636                               60532 3805 +     65473 I
e Tarsius_lariang.k141_609102                               27216 3812 +     42269 I
e Rattus_norvegicus.chr11                                13915860 1475 +  90463843 I
e Peromyscus_maniculatus.KI615518.1                       4951275  0 -   8017169 C
e Nannospalax_galili.KL201303.1                            119159  6 +    362372 I
e Dolichotis_patagonum.DolPat_scaffold_14102                36772 276 -     73477 I
e Dasyprocta_punctata.DasPun_flattened_line_634             59553 276 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                18462 277 +     26546 I
e Ctenodactylus_gundi.CteGun_scaffold_447                  209424  0 -    956709 C
e Cricetomys_gambianus.CriGam_scaffold_949                 279183 147 -    399297 I
e Cephalopachus_bancanus.k141_702587                         8788 3391 +     21754 I
e Cavia_tschudii.CavTsc_scaffold_488                       177453 271 +    436027 I
e Cavia_porcellus.DS562889.1                             15799262 290 -  24440124 I
e Cavia_aperea.AVPZ01000278.1                            15787326 288 -  24422027 I
e Carlito_syrichta.NW_007248099.1                          309764 3411 +    345090 I
e Pan_paniscus.CM003386.1                               127575888 480 - 205426864 I
e Pan_troglodytes.CM009241.2                            120153042 480 - 196562556 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               14981 3 +    209709 AA-A
s Acinonyx_jubatus.LLWD01000356.1                         2034994 3 +   3721120 AA-A
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    114806 3 -    189883 A-CA
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 1000 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10658557 3 +  23371972 AA-A
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7095692 2 -  16596857 a--a
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   18351 3 -     22067 A-AA
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   2708 3 -     60446 AA-A
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         3425 3 -     29318 AA-A
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         2361 3 +     38766 AA-A
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          3319 3 -     80423 AA-A
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            11300 3 -     18050 AA-A
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_1710068                               1016 3 +      1555 AA-A
i Alouatta_caraya.k141_1710068                          C 0 C 0
s Alouatta_discolor.k141_811576                             11973 3 -     21359 AA-A
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                1596 3 +      2129 AA-A
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_2177643                           973 3 -      1868 AA-A
i Alouatta_macconnelli.k141_2177643                     C 0 C 0
s Alouatta_nigerrima.k141_3537692                            1022 3 +      1660 AA-A
i Alouatta_nigerrima.k141_3537692                       C 0 C 0
s Alouatta_palliata.k141_2764429                              942 3 -      1480 AA-A
i Alouatta_palliata.k141_2764429                        C 0 C 0
s Alouatta_puruensis.k141_131505                              229 3 +      4855 AA-A
i Alouatta_puruensis.k141_131505                        C 0 C 0
s Alouatta_seniculus.k141_1531728                            1157 3 -      1692 AA-A
i Alouatta_seniculus.k141_1531728                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3521130 3 +   4113121 AA-A
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      391535 2 -    631301 A--A
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            31715 3 +     33004 AA-A
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 63647 3 +     78111 AA-A
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            6589 3 +     22701 AG-A
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5750546 3 +   9889416 AA-A
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             7135 3 -    104377 AA-A
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               7137 3 +     23246 AA-A
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_231055                     1032 3 -      2492 A-TA
i Aplodontia_rufa.AprRuf_scaffold_231055                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        1939 3 +      9265 AA-A
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 9952 2 -     29036 A--A
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9540411 3 +  39197703 AA-A
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             61682 3 +     85812 AA-A
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                12695 3 +     89302 AA-A
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             17198 3 -     58268 AA-A
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             65190 3 +    119057 AA-A
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               7161 3 -     25888 AA-A
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 7674 3 -     16375 AA-A
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               1290 3 +      6337 AA-A
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26381193 3 +  51448160 AA-A
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        6365 3 -     13118 AA-A
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   44236 3 -     72089 AA-A
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6560859 3 +   6870073 AA-A
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138140974 3 - 161108492 AA-A
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     573515 3 -    998990 AA-A
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136296707 3 - 158972876 AA-A
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1233788 3 -   1914593 AA-A
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               115048 3 -    171031 AA-A
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 14077 3 +    125063 AA-A
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                16120 3 -    216513 AA-A
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        8663 3 -    134917 AA-A
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3220539 3 -   8989139 AA-A
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           398240 3 -  15254737 AA-A
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2973976 3 +   6889770 AA-A
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11520707 3 +  39901454 AA-A
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   15732 3 +     87036 AA-A
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11267376 3 -  35597290 AA-A
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11089909 3 +  39895921 AA-A
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16456922 3 -  44759192 AA-A
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21326201 3 + 157394656 AA-A
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135707429 3 - 157403528 AA-A
i Capra_hircus.CM004562.1                               C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               60742 2 +     67245 A--A
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   32106 3 +     33760 A-AA
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   159864 3 -    276539 AA-A
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18891883 3 -  29618158 AA-A
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 9427 3 -     26817 AA-A
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                13670 3 +     25043 AA-A
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4364910 3 +   7569818 AA-A
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         4667 3 -      9338 AA-A
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6556655 3 +   6739814 AA-A
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      28129 3 +     60454 AA-A
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          3336 3 -     21101 AA-A
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         60646 3 -    107033 AA-A
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        3525 3 -     17608 AA-A
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                           684 3 +     45019 AA-A
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                            768 3 +     15177 AA-A
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          3568 3 +     16677 AA-A
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           25738 3 +     35983 AA-A
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11992266 3 +  12117833 AA-A
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46479024 3 +  46592721 AA-A
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      42578 3 -     45581 AA-A
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       3580 3 +     35577 AA-A
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        3353 3 -     25661 AA-A
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        3332 3 -     17744 AA-A
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        22938 3 +     37128 AA-A
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           3765 3 -      6963 AA-C
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           59945 3 -     68416 AA-A
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            8997 3 +     13308 AA-A
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             6705 3 -     18223 AA-A
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             23723 3 +     25473 AA-A
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           42763 3 +     57117 AA-A
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          47442 3 +     54541 AA-A
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15962716 2 +  43084221 A--A
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         72249 3 +    196370 AA-A
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          16429 3 +     40510 AA-A
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15140935 3 -  15256731 AA-A
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      35544 3 -     53260 AA-A
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101146103 3 + 101219884 AA-A
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                17511 3 -     21363 AA-T
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           762816 3 +    964067 AA-T
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10888095 3 +  10971483 AA-A
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147666023 3 + 156195979 AA-A
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            18006 3 +     23629 AA-A
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60620572 3 +  78930452 AA-T
i Condylura_cristata.JH655880.1                         C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 279330 3 -    399297 T-AA
i Cricetomys_gambianus.CriGam_scaffold_949              I 147 C 0
s Cricetulus_griseus.LT883672.1                          53030253 3 +  72327488 C-AA
i Cricetulus_griseus.LT883672.1                         I 108 C 0
s Crocidura_indochinensis.CroInd_scaffold_848148              550 3 +      1327 AA-A
i Crocidura_indochinensis.CroInd_scaffold_848148        C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            53046 3 -     70449 AA-A
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 32073 2 -     67205 A--A
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          184610 3 -   6883506 AA-T
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16845809 3 +  31942871 AA-A
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80037821 3 -  96802777 AA-C
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18700030 2 -  18957592 A--A
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 323562 3 +    993696 AA-A
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   4214 3 +    151128 AA-A
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   157915 2 +    228994 A--A
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Eidolon_helvum.KE772537.1                                 13271 3 +     24177 tt-t
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1492474 3 +   1727528 AA-A
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7829719 3 +  15467074 AA-A
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        240427 3 -    369425 C-AA
i Ellobius_lutescens.LOEQ01003611.1                     I 109 C 0
s Ellobius_talpinus.LOJH01090055.1                           7596 3 -      7838 C-AA
i Ellobius_talpinus.LOJH01090055.1                      I 109 C 0
s Enhydra_lutris.KZ291749.1                              85873214 3 +  99434291 AG-A
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4707965 3 +   6522550 AC-A
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5854200 3 -   7175178 AA-A
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13352700 3 +  41866177 AA-A
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          14190 3 +     92910 AA-A
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erythrocebus_patas.Contig8                             48778114 3 -  48907691 AA-A
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          316033 3 +    330699 AA-A
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             62489 3 +     89355 AA-A
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              5984 3 +     13586 AA-A
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               5916 3 -      6809 AA-A
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            12390 3 +     36558 AA-T
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             8711 3 +     60246 AA-T
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                12189 3 +    109717 AA-A
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                  174 3 -     19505 AA-T
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                16849 3 +     27497 AA-A
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           19305 3 +     26808 AA-T
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                34043 3 +     46535 AA-A
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              16769 3 -     29447 AA-A
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129893966 3 - 159252932 AA-A
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129281050 3 - 158578461 AA-A
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 22190 3 +     52776 AA-A
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13892384 2 -  19261668 A--A
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     211846 3 -    847004 AA-A
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           14220 3 -     43889 AA-A
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          11286 3 +     27357 AA-A
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               157312 3 +    324696 AA-A
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    182255 3 -    189561 AA-A
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           14780 3 -     18683 A-AA
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               6695 3 -     14630 AA-A
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119653795 3 - 195582420 AA-A
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   78194 3 +    118900 C-AT
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         2774 3 +     10286 AA-A
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             1254 3 -     11661 AA-A
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             6580 3 +     56096 AA-A
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        29829 3 -     42470 AA-A
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        46457 3 -     54384 AA-A
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              18241 3 +     53719 AA-A
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                28490 3 -     91191 AA-A
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2552107 2 +  31725842 A--A
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              148116 3 +    277961 AA-A
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      279428 3 -    477199 AA-A
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_345408               426 3 -       919 AA-A
i Hipposideros_galeritus.HipGal_scaffold_345408         C 0 C 0
s Hoolock_leuconedys.ctg79                                      6385 3 -   7690867 AA-A
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 18312 3 -     67322 AA-A
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hylobates_abbotti.k141_164775                              1168 3 -      2073 AA-A
i Hylobates_abbotti.k141_164775                         C 0 C 0
s Hylobates_agilis.k141_1362131                               177 3 +      1075 AA-A
i Hylobates_agilis.k141_1362131                         I 38 C 0
s Hylobates_klossii.k141_183401                               721 3 -      1272 AA-A
i Hylobates_klossii.k141_183401                         I 25 C 0
s Hylobates_pileatus_b.ContigUN                                 14626073 3 -  25970782 AA-A
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_950183                              769 3 +      2027 AA-A
i Hylobates_muelleri.k141_950183                        C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             35233 3 -     60944 AA-A
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     7173 2 +     22540 A--A
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7126860 3 +  13083262 A-TT
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_5141390                                   1307 3 -      3181 AA-A
i Indri_indri.k141_5141390                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              10027 3 +     17520 AA-C
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH727545.1                                 1963 3 -      4668 A-AA
i Jaculus_jaculus.JH727545.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               24629 3 +     37189 AA-A
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          51280 3 -    147782 AA-A
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    4635 3 +     26176 AC-A
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258408132 3 - 285822530 AA-A
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        24883 3 +     39228 AA-A
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            54269 3 +     63517 AA-A
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        79531 3 +    116806 AA-A
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     32522 3 -     33031 AA-A
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3086993 3 -   3498232 AA-A
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    14335 3 +     22452 AA-A
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            136983 3 +   3060487 AA-C
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19249732 3 +  19376315 AA-A
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           11575 3 +     84689 AA-A
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3779324 3 +   6799190 AA-A
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20595827 3 -  62548349 AA-A
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11089365 3 +  39895028 AA-A
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             21489 3 +     74745 AA-A
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12707949 3 +  12821369 AA-A
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                 527 3 -     26467 AA-A
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           48394 3 +     63263 AA-A
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                  504 3 -     26361 AA-A
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 3681 3 -      7381 AA-A
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  46919 3 -     79256 AA-A
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196037021 3 + 196197964 AA-A
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11447187 3 +  11645122 AA-A
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   5873 3 -     46448 AA-A
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                3539 3 -     13212 AA-A
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 17216 3 -     55006 AA-A
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43842322 3 +  43892939 AA-A
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               18503 3 -     24607 AA-A
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               5870 3 -     27140 AA-A
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                701987 3 +    802869 AA-T
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43438904 3 -  43563597 AA-A
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4451718 3 -   4543643 AA-A
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            147069 3 +    252755 AA-A
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             37212 3 +     58827 AA-A
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36874780 3 +  64221397 A-TT
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             2031 3 -     87323 AG-C
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               14348 3 +     15977 A-TA
i Meriones_unguiculatus.MerUng_scaffold_52233           I 108 C 0
s Mesocricetus_auratus.KB708139.1                         1048058 3 -  26018355 C-AA
i Mesocricetus_auratus.KB708139.1                       I 106 C 0
s Mesoplodon_bidens.MesBid_scaffold_475714                    130 3 +       551 AA-A
i Mesoplodon_bidens.MesBid_scaffold_475714              C 0 C 0
s Microcebus_murinus.CM007691.1                          16511164 3 +  47401472 AA-A
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  39316 3 -     48017 AA-A
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               23921 2 -     32043 A--A
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22820785 3 -  98408828 C-AA
i Microtus_ochrogaster.CM001673.1                       I 109 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8211998 3 +  10048721 AA-A
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            36487 3 +     45743 AA-A
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         3465 3 +     29742 AA-A
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        12520 3 -    104932 AA-A
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     6553 3 +      8497 AA-A
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 147411 3 +    154973 AA-C
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                162455 3 +    265003 AA-T
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  2505 3 -     19904 AA-A
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  145940 3 -    168139 AA-A
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          23443 3 -    100666 AA-A
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70767755 1 +  92629107 A---
i Mus_caroli.LT608236.1                                 I 112 I 1
s Mus_musculus.chr16                                     75490835 1 +  98207768 A---
i Mus_musculus.chr16                                    I 112 I 1
s Mus_pahari.LT608305.1                                  67557034 1 +  89017189 A---
i Mus_pahari.LT608305.1                                 I 112 I 1
s Mus_spretus.CM004110.1                                 74333570 1 +  97876770 a---
i Mus_spretus.CM004110.1                                I 112 I 1
s Muscardinus_avellanarius.MusAve_scaffold_9643             13291 3 +     98495 A-AA
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4425397 3 -  28371801 ag-a
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     91400 2 -    117718 A--A
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               970304 3 +   8389877 AA-A
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5021729 3 +   6462685 AA-A
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3467807 3 -   3747815 AA-A
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        13050 3 +     66751 AA-A
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             6057 3 -      8794 AA-T
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            119165 3 +    362372 t-aa
i Nannospalax_galili.KL201303.1                         I 6 C 0
s Nasalis_larvatus.k141_153429                               9942 3 +     48152 AA-A
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4485910 3 -  14209539 AA-A
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3952023 3 -   4490290 AA-C
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Nomascus_annamensis.k141_224620                             539 3 -      2316 AA-A
i Nomascus_annamensis.k141_224620                       C 0 C 0
s Nomascus_concolor.k141_226614                              2636 3 -      5092 AA-A
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_1032971                            210 3 -      1918 AA-A
i Nomascus_gabriellae.k141_1032971                      C 0 I 5
s Nomascus_siki_b.tarseq_80                             26388 3 -  18771707 AA-A
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  4058 3 +      4512 AA-A
i Nomascus_siki_a.k141_595747                             I 25 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                32149 3 +   3668941 AA-A
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65568029 3 -  95554990 AA-A
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            4755 3 +      6470 AA-A
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65670362 3 +  89412551 AA-A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Octodon_degus.JH651621.1                                3686899 2 +  10294119 A--A
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             680572 3 -   3126709 AA-A
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1080692 3 +   1425656 AA-A
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         37981 3 +     78940 AA-A
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  126050 3 +    145789 C-AA
i Ondatra_zibethicus.OndZib_scaffold_6821               I 109 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  38229 3 +     62360 C-AA
i Onychomys_torridus.OnyTor_scaffold_12578              I 109 C 0
s Orcinus_orca.KB316965.1                                 7225708 3 -   7562323 AA-C
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              60945 3 -     66828 AA-A
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141877373 3 + 163896628 AA-A
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      309444 3 -    505867 aa-a
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        1661 3 -     53940 AA-A
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18009642 3 -  38779656 AA-A
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134078281 3 - 275406953 AA-A
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      79496 3 +    140051 AA-A
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  35333 3 +    295523 AA-A
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3639083 3 +  18214204 AA-A
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5028759 3 -   6340057 AA-A
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1067130 3 -   1292953 AA-A
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188157698 3 - 188283584 AA-A
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                               790 3 +     25005 AA-A
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47515075 3 +  47705337 AA-A
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 69065 3 -    104429 AA-A
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    7594 3 +     14967 AA-A
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 3459 3 -      7628 AA-A
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    116817 3 -    135482 AA-A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           6346 3 -     23713 AA-A
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            25660 3 -     27972 AA-A
i Perodicticus_potto.k141_713187                        C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    14629 2 -     36578 C--A
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_648925              312 3 -       346 AA-C
i Phocoena_phocoena.PhoPho_flattened_line_648925        C 0 C 0
s Piliocolobus_badius.k141_1987485                           3475 3 -      5908 AA-A
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       4093 3 -     17985 AA-A
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            3460 3 +      7694 AA-A
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26741944 3 +  26888534 AA-A
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pithecia_albicans.k141_991845                             44886 3 -     61926 AA-A
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        26269 3 +     78826 AT-A
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                             10317 3 -     15800 AA-A
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        13516 3 -     16101 AA-A
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          6745 3 +      9673 AA-A
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13475745 3 -  19735023 AT-A
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           14648 3 -     31692 AA-A
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           6629 3 +     21690 AA-A
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       23984 3 +     44506 AA-A
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        24197 3 +     67491 AA-A
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      14436 3 -     98129 AA-A
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     24036 3 +    147771 AA-A
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                          672 3 -     43940 AA-A
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          4755 3 -     55515 AA-A
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         24109 3 +    152463 AA-A
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       1826 3 -    119457 AA-A
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         13832 3 +    134592 AA-A
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          24419 3 -     75465 AA-A
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              188582 3 -    373494 AA-A
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19809229 3 +  19899266 AA-A
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               7222 3 -     15069 AA-A
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              7337 3 +     14865 AA-A
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6849503 3 +  12164890 AA-A
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     19677 3 -     30946 nn-n
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         4582 3 +     11805 AA-A
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           43930 3 +     52369 AA-A
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         36317 3 -     44753 AA-A
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            18240 3 +     27322 AA-A
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       17874 3 -     53241 AA-A
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         40138 3 -     48185 AA-A
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Pteronotus_parnellii.KE867983.1                            5101 3 -     27784 AA-A
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        247708 3 -    344369 AG-A
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13246994 3 -  17261082 AA-T
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             604945 3 -   3946241 AA-T
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131535354 3 - 161321710 AA-A
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             31326 3 +     56732 AA-A
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6807820 3 +   6970761 AA-A
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             7213 3 +     18040 AA-A
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                16804 3 +     68503 AA-A
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1788870 3 +   2252614 AA-A
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                            1609 3 -     17045 AA-A
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206379097 3 - 206558726 AA-A
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44857999 3 -  45163003 AA-A
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                20330 3 +    109198 AA-T
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       8957 3 +     12214 AA-A
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15673833 3 -  43202129 AA-A
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        5746 3 +     34089 AA-A
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              5688 3 -     60842 AA-A
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              5781 3 +     67014 AA-A
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              5759 3 +     60816 AA-A
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 5696 3 -     76454 AA-A
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17342428 3 -  30362882 AA-A
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         21789 3 -     62485 AA-A
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   37708 3 -    114521 AA-T
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        4829 3 +     15331 AA-A
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      10204 3 +     20762 AA-A
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         120209 3 +    130994 AA-A
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           38988 3 +     46263 AA-A
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     32133 3 +     42640 AA-A
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        15155 3 +     30600 AA-A
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  101389 3 -    120886 C-AA
i Sigmodon_hispidus.SigHis_scaffold_11332               I 109 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            19905 3 +    739146 AA-G
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17767469 3 -  27805282 AA-A
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2240776 3 +   2842873 G-TT
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             236083 3 -    276980 AA-A
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            28599 3 +     62062 AA-A
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189273106 3 + 218635234 AA-A
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        16332 3 -  13920577 AA-A
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                1299 3 +     20549 AA-A
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               15723 3 +     45698 AA-T
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      808150 3 +   1148477 AA-A
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  58863 3 +     99546 AA-A
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194009226 3 - 194193292 AA-A
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             39982 2 -     47444 A--A
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  6503 3 +      6782 AA-T
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  137080 2 -    259118 G--A
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        28476 3 +     38948 AA-A
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   22036 3 -     32910 AA-A
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      3937 3 -     12939 aa-a
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       3365 3 -     14244 AA-A
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           44763 3 -     54611 AA-A
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        2559 3 -     11566 AA-A
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     4743 3 -     15592 AA-A
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          3395 3 +     14371 AA-A
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   1681 3 +     12481 AA-A
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        1556 3 -     24393 AA-A
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       6806 3 -     28054 AA-A
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44661590 3 -  44834318 AA-A
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       3907 3 +     13828 AA-A
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   6150 3 +     90398 AA-A
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16086841 3 +  31416278 AA-A
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2794419 3 -   3938065 aa-a
i Tupaia_chinensis.KB320831.1                           I 15 I 32
s Tupaia_tana.TupTan_flattened_line_68454                    6504 3 +     13056 AA-A
i Tupaia_tana.TupTan_flattened_line_68454               I 15 I 55
s Tursiops_truncatus.MRVK01000923.1                      69314424 3 -  96451834 AA-C
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   8275 3 +     10241 AA-T
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6515828 3 +  28682327 AA-A
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  6138 3 -     20643 AA-A
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             25673 3 -     33872 AA-A
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1525644 3 -   2331223 aa-a
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                139544 3 -    281493 AA-A
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       127891 3 -    134049 A-TG
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        215299 3 -    227762 AA-A
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     16833 3 -     20485 A-CA
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           7916 3 -      8775 AA-A
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Ochotona_princeps.JH802095.1                            4996729 2205 -  23139505 I
e Perognathus_longimembris.PerPac_flattened_line_19359        892 695 +     49596 I
e Dipodomys_ordii.KN672545.1                              3657363 894 +   4240102 I
e Procavia_capensis.ProCapCap_scaffold_149274                2467 1156 -      9567 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Megaderma_lyra.MegLyr_scaffold_3562                       64783 239 -    234502 I
e Heterohyrax_brucei.HetBruBak_scaffold_25354               61360 1157 +     73687 I
e Echinops_telfairi.JH980316.1                           22999931 2 -  44670279 I
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1008 325 -      5782 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19677 266 -    119109 I
e Tarsius_wallacei.k141_48636                               60532 3805 +     65473 I
e Tarsius_lariang.k141_609102                               27216 3812 +     42269 I
e Rattus_norvegicus.chr11                                13915860 1475 +  90463843 I
e Psammomys_obesus.NESX01026517.1                           36530 59 +     77221 I
e Peromyscus_maniculatus.KI615518.1                       4951275 0 -   8017169 C
e Dolichotis_patagonum.DolPat_scaffold_14102                36772 276 -     73477 I
e Dasyprocta_punctata.DasPun_flattened_line_634             59553 276 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                18462 277 +     26546 I
e Ctenodactylus_gundi.CteGun_scaffold_447                  209424 0 -    956709 C
e Cephalopachus_bancanus.k141_702587                         8788 3391 +     21754 I
e Cavia_tschudii.CavTsc_scaffold_488                       177453 271 +    436027 I
e Cavia_porcellus.DS562889.1                             15799262 290 -  24440124 I
e Cavia_aperea.AVPZ01000278.1                            15787326 288 -  24422027 I
e Carlito_syrichta.NW_007248099.1                          309764 3411 +    345090 I
e Pan_paniscus.CM003386.1                               127575888 480 - 205426864 I
e Pan_troglodytes.CM009241.2                            120153042 480 - 196562556 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               14984  5 +    209709 T------GT--------TC
s Acinonyx_jubatus.LLWD01000356.1                         2034997  5 +   3721120 A------TT--------TT
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    114809  9 -    189883 A------CC----TGTTTT
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 I 31
s Ailuropoda_melanoleuca.LNAT01000321.1                  10658560  5 +  23371972 A------TT--------TC
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7095694  5 -  16596857 a------tt--------tc
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   18354  5 -     22067 T------CT--------AC
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   2711  5 -     60446 T------GT--------TC
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         3428  5 -     29318 T------GT--------TC
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         2364  5 +     38766 T------GT--------TC
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          3322  5 -     80423 T------GT--------TC
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            11303 11 -     18050 TGTTCCTGT--------TC
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_1710068                               1019 11 +      1555 TGTTCCTGT--------TC
i Alouatta_caraya.k141_1710068                          C 0 C 0
s Alouatta_discolor.k141_811576                             11976 11 -     21359 TGTTCCTGT--------TC
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                1599 11 +      2129 TGTTCCTGT--------TC
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_2177643                           976 11 -      1868 TGTTCCTGT--------TC
i Alouatta_macconnelli.k141_2177643                     C 0 C 0
s Alouatta_nigerrima.k141_3537692                            1025 11 +      1660 TGTTCCTGT--------TC
i Alouatta_nigerrima.k141_3537692                       C 0 C 0
s Alouatta_palliata.k141_2764429                              945 11 -      1480 TGTTCCTGT--------TC
i Alouatta_palliata.k141_2764429                        C 0 C 0
s Alouatta_puruensis.k141_131505                              232 11 +      4855 TGTTCCTGT--------TC
i Alouatta_puruensis.k141_131505                        C 0 C 0
s Alouatta_seniculus.k141_1531728                            1160 11 -      1692 TGTTCCTGT--------TC
i Alouatta_seniculus.k141_1531728                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3521133  5 +   4113121 T------GT--------TC
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      391537  5 -    631301 T------TT--------TC
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            31718  5 +     33004 T------TT--------TT
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 63650 10 +     78111 TATTC-TGT--------TC
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            6592 11 +     22701 TATTCCTGT--------TC
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5750549 11 +   9889416 TATTCCTGT--------TC
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             7138 11 -    104377 TATTCCTGT--------TC
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               7140 11 +     23246 TATTCCTGT--------TC
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_231055                     1035  5 -      2492 T------TT--------TC
i Aplodontia_rufa.AprRuf_scaffold_231055                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        1942  5 +      9265 T------TC--------TC
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 9954  5 -     29036 T------TT--------TC
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9540414 11 +  39197703 TGTTCCTGT--------TC
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             61685 11 +     85812 TGTTCCTGT--------TC
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                12698 11 +     89302 TGTTCCTGT--------TC
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             17201 11 -     58268 TGTTCCTGT--------TC
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             65193 11 +    119057 TGTTCCTGT--------TC
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               7164 11 -     25888 TGTTCCTGT--------TC
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 7677  5 -     16375 T------TT--------TC
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               1293  5 +      6337 T------TT--------TC
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26381196  5 +  51448160 T------TT--------TC
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        6368  5 -     13118 T------TT--------TC
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   44239  5 -     72089 T------TT--------TC
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6560862  5 +   6870073 T------TT--------TC
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138140977  5 - 161108492 T------TT--------TC
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     573518  5 -    998990 T------TT--------TC
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136296710  5 - 158972876 T------TT--------TC
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1233791  5 -   1914593 T------TT--------TC
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               115051 11 -    171031 TGTTCCTGT--------TC
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 14080 11 +    125063 TGTTCCTGT--------TC
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                16123 11 -    216513 TGTTCCTGT--------TC
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        8666 11 -    134917 TGTTCCTGT--------TC
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3220542  5 -   8989139 T------TT--------CC
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           398243  5 -  15254737 T------TT--------CC
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2973979  5 +   6889770 T------TT--------CC
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11520710  5 +  39901454 A------TT--------TC
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   15735  5 +     87036 A------TT--------TC
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11267379  5 -  35597290 A------TT--------TC
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11089912  5 +  39895921 A------TT--------TC
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16456925  5 -  44759192 A------TT--------TC
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21326204  5 + 157394656 T------GT--------TC
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135707432  5 - 157403528 T------GT--------TC
i Capra_hircus.CM004562.1                               C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               60744  5 +     67245 T------AT--------TC
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   32109  5 +     33760 T------TT--------TC
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   159867  5 -    276539 C------TT--------AC
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18891886 11 -  29618158 TATTCCTGT--------TC
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 9430 11 -     26817 TATTCCTGT--------TC
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                13673 11 +     25043 TATTCCTGT--------TC
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4364913  5 +   7569818 T------TT--------TC
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         4670  5 -      9338 T------TT--------TC
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6556658  5 +   6739814 T------GT--------TC
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      28132  5 +     60454 T------GT--------TC
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          3339  5 -     21101 T------GT--------TC
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         60649  5 -    107033 T------GT--------TC
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        3528  5 -     17608 T------GT--------TC
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                           687  5 +     45019 T------GT--------TC
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                            771  5 +     15177 T------GT--------TC
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          3571  5 +     16677 T------GT--------TC
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           25741  5 +     35983 T------GT--------TC
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11992269  5 +  12117833 T------GT--------TC
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46479027  5 +  46592721 T------GT--------TC
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      42581  5 -     45581 T------GT--------TC
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       3583  5 +     35577 T------GT--------TC
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        3356  5 -     25661 T------GT--------TC
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        3335  5 -     17744 T------GT--------TC
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        22941  5 +     37128 T------GT--------TC
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           3768  3 -      6963 T------TT----------
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           59948  5 -     68416 T------TT--------CC
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            9000  5 +     13308 T------TT--------CC
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             6708 11 -     18223 TGTTCCTGC--------TC
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             23726 11 +     25473 TGTTCCTGC--------TC
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           42766 11 +     57117 TGTTCCTGC--------TC
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          47445 11 +     54541 TGCTCCTGC--------TC
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15962718  5 +  43084221 T------TT--------CC
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         72252 11 +    196370 TGTTCCTGT--------TC
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          16432 11 +     40510 TGTTCCTGT--------TC
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15140938  5 -  15256731 T------GT--------TC
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      35547  5 -     53260 T------GT--------TC
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101146106  5 + 101219884 T------GT--------TC
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                17514  5 -     21363 C------TT--------CC
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           762819  5 +    964067 C------TT--------CC
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10888098  5 +  10971483 T------GT--------TC
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147666026  5 + 156195979 T------GT--------TC
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            18009  5 +     23629 T------GT--------TC
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60620575  5 +  78930452 G------CT--------TT
i Condylura_cristata.JH655880.1                         C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 279333  9 -    399297 T------CC----TTTTTT
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 I 32
s Cricetulus_griseus.LT883672.1                          53030256  9 +  72327488 T------TC----CTTTTG
i Cricetulus_griseus.LT883672.1                         C 0 I 31
s Crocidura_indochinensis.CroInd_scaffold_848148              553  3 +      1327 C------AA----------
i Crocidura_indochinensis.CroInd_scaffold_848148        C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            53049  5 -     70449 A------TT--------TT
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 32075  4 -     67205 T-------T--------CC
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          184613  5 -   6883506 T------CT--------CT
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16845812  5 +  31942871 T------TT--------TC
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80037824  5 -  96802777 T------TT--------TC
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18700032  5 -  18957592 T------TT--------CC
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 323565  5 +    993696 T------TT--------TC
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   4217  5 +    151128 T------TT--------TC
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   157917  5 +    228994 T------TT--------CC
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Eidolon_helvum.KE772537.1                                 13274  5 +     24177 t------tt--------tc
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1492477  5 +   1727528 T------TT--------TC
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7829722  5 +  15467074 G------TT--------CC
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        240430  9 -    369425 A------CC----ATTTTG
i Ellobius_lutescens.LOEQ01003611.1                     C 0 I 30
s Ellobius_talpinus.LOJH01090055.1                           7599  9 -      7838 A------CC----ATTTTg
i Ellobius_talpinus.LOJH01090055.1                      C 0 I 31
s Enhydra_lutris.KZ291749.1                              85873217  5 +  99434291 A------TT--------TC
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4707968  5 +   6522550 T------TT--------TC
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5854203  5 -   7175178 T------TT--------CT
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13352703  5 +  41866177 T------TT--------CT
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          14193  5 +     92910 T------TT--------CT
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erythrocebus_patas.Contig8                             48778117  5 -  48907691 T------GT--------TC
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          316036  5 +    330699 T------TT--------TC
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             62492  5 +     89355 T------TT--------TC
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              5987  5 +     13586 T------TT--------TC
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               5919  5 -      6809 T------TT--------TC
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            12393  5 +     36558 T------TT--------TC
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             8714  5 +     60246 T------TT--------TC
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                12192  5 +    109717 T------TT--------TC
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                  177  5 -     19505 T------TT--------TC
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                16852  5 +     27497 T------TT--------TC
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           19308  5 +     26808 T------TT--------TC
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                34046  5 +     46535 T------TT--------TC
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              16772  5 -     29447 T------TT--------TC
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129893969  5 - 159252932 A------TT--------TT
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129281053  5 - 158578461 A------TT--------TT
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 22193  5 +     52776 A------TT--------TT
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13892386  5 -  19261668 T------TT--------GA
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     211849  5 -    847004 T------TC--------TC
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           14223  5 -     43889 T------TC--------TC
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          11289  5 +     27357 T------TC--------TC
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               157315  5 +    324696 T------TT--------TC
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    182258  5 -    189561 T------TT--------TC
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           14783  5 -     18683 T------TT--------TC
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               6698  5 -     14630 T------GT--------TC
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119653798  5 - 195582420 T------GT--------TC
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   78197  5 +    118900 T------TT--------TC
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         2777  5 +     10286 T------TT--------TC
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             1257  5 -     11661 T------TT--------TC
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             6583  5 +     56096 T------TT--------TC
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        29832  5 -     42470 T------TT--------TC
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        46460  5 -     54384 T------TT--------TC
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              18244  5 +     53719 A------TT--------TT
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                28493  5 -     91191 T------GT--------TC
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2552109  5 +  31725842 T------TT--------GC
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              148119  5 +    277961 T------TT--------TC
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      279431  5 -    477199 G------TT--------GC
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_345408               429  4 -       919 -------TT--------TC
i Hipposideros_galeritus.HipGal_scaffold_345408         C 0 I 57
s Hoolock_leuconedys.ctg79                                      6388  5 -   7690867 T------GT--------TC
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 18315  5 -     67322 A------TT--------TC
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hylobates_abbotti.k141_164775                              1171  5 -      2073 T------GT--------TC
i Hylobates_abbotti.k141_164775                         C 0 C 0
s Hylobates_agilis.k141_1362131                               180  5 +      1075 T------GT--------TC
i Hylobates_agilis.k141_1362131                         C 0 C 0
s Hylobates_klossii.k141_183401                               724  5 -      1272 T------GT--------TC
i Hylobates_klossii.k141_183401                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14626076  5 -  25970782 T------GT--------TC
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_950183                              772  5 +      2027 T------GT--------TC
i Hylobates_muelleri.k141_950183                        C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             35236  5 -     60944 T------GT--------TC
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     7175  5 +     22540 T------TT--------GC
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7126863  1 +  13083262 T------------------
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_5141390                                   1310  5 -      3181 T------TT--------TC
i Indri_indri.k141_5141390                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              10030  5 +     17520 T------TT--------TC
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH727545.1                                 1966  5 -      4668 T------CC--------AC
i Jaculus_jaculus.JH727545.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               24632  5 +     37189 T------TT--------TC
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          51283 11 -    147782 TGTTCCTGT--------TC
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    4638  5 +     26176 T------TT--------TC
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258408135  5 - 285822530 T------TT--------TC
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        24886  5 +     39228 T------TC--------TC
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            54272  5 +     63517 T------TC--------TC
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        79534  5 +    116806 T------TC--------TC
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     32525  5 -     33031 T------TC--------TC
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3086996  5 -   3498232 A------TT--------TA
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    14338  5 +     22452 T------TT--------TC
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            136986  5 +   3060487 T------TT--------TC
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19249735  5 +  19376315 T------GT--------TC
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           11578  5 +     84689 T------TC--------TC
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3779327  5 +   6799190 T------TC--------TC
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20595830  5 -  62548349 G------TT--------CC
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11089368  5 +  39895028 A------TT--------TC
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             21492  5 +     74745 T------GT--------TC
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12707952  5 +  12821369 T------GT--------TC
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                 530  5 -     26467 T------GT--------TC
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           48397  5 +     63263 T------GT--------TC
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                  507  5 -     26361 T------GT--------TC
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 3684  5 -      7381 T------GT--------TC
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  46922  5 -     79256 T------GT--------TC
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196037024  5 + 196197964 T------GT--------TC
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11447190  5 +  11645122 T------GT--------TC
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   5876  5 -     46448 T------GT--------TC
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                3542  5 -     13212 T------GT--------TC
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 17219  5 -     55006 T------GT--------TC
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43842325  5 +  43892939 T------GT--------TC
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               18506  5 -     24607 T------GT--------TC
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               5873  5 -     27140 T------GT--------CC
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                701990  5 +    802869 T------TT--------TC
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43438907  5 -  43563597 T------GT--------TC
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4451721  5 -   4543643 T------GT--------TC
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            147072  5 +    252755 T------TT--------TC
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             37215  5 +     58827 T------TT--------TC
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36874783  1 +  64221397 T------------------
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             2034  5 -     87323 A------TT--------TC
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               14351  9 +     15977 A------CC----CATTTT
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 I 31
s Mesocricetus_auratus.KB708139.1                         1048061  9 -  26018355 T------TC----CTTTTG
i Mesocricetus_auratus.KB708139.1                       C 0 I 31
s Mesoplodon_bidens.MesBid_scaffold_475714                    133  5 +       551 T------TT--------TC
i Mesoplodon_bidens.MesBid_scaffold_475714              C 0 C 0
s Microcebus_murinus.CM007691.1                          16511167  5 +  47401472 T------TT--------TC
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  39319  5 -     48017 A------TC--------CC
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               23923  5 -     32043 T------TT--------TC
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22820788  9 -  98408828 C------TC----CTTTTG
i Microtus_ochrogaster.CM001673.1                       C 0 I 31
s Miniopterus_natalensis.LDJU01000022.1                   8212001  5 +  10048721 T------AT--------TC
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            36490  5 +     45743 T------AT--------TC
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         3468  5 +     29742 T------GT--------TC
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        12523  5 -    104932 A------TT--------TA
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     6556  5 +      8497 T------TT--------TC
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 147414  5 +    154973 T------TT--------TC
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                162458  5 +    265003 T------TT--------TC
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  2508  5 -     19904 T------TT--------TC
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  145943  5 -    168139 A------TT--------TT
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          23446  5 -    100666 T------TT--------TC
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70767757  1 +  92629107 --------C----------
i Mus_caroli.LT608236.1                                 I 1 I 3738
s Mus_musculus.chr16                                     75490837  1 +  98207768 --------C----------
i Mus_musculus.chr16                                    I 1 I 2711
s Mus_pahari.LT608305.1                                  67557036  1 +  89017189 --------C----------
i Mus_pahari.LT608305.1                                 I 1 I 2889
s Mus_spretus.CM004110.1                                 74333572  1 +  97876770 --------c----------
i Mus_spretus.CM004110.1                                I 1 I 2703
s Muscardinus_avellanarius.MusAve_scaffold_9643             13294  5 +     98495 T------TT--------TT
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4425400  5 -  28371801 a------tt--------tc
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     91402  4 -    117718 T-------T--------CC
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               970307  5 +   8389877 T------TT--------TC
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5021732  5 +   6462685 T------TT--------TC
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3467810  5 -   3747815 T------TT--------TC
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        13053  5 +     66751 T------TT--------TC
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             6060  5 -      8794 A------TT--------CC
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            119168 13 +    362372 t------cccaacgagttt
i Nannospalax_galili.KL201303.1                         C 0 I 38
s Nasalis_larvatus.k141_153429                               9945  5 +     48152 T------GT--------TC
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4485913  5 -  14209539 A------TT--------TA
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3952026  5 -   4490290 T------TT--------TC
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Nomascus_annamensis.k141_224620                             542  5 -      2316 T------GC--------TC
i Nomascus_annamensis.k141_224620                       C 0 C 0
s Nomascus_concolor.k141_226614                              2639  5 -      5092 T------GC--------TC
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_1004198                           1201  5 +      1448 T------GT--------TC
i Nomascus_gabriellae.k141_1004198                      I 27 I 110
s Nomascus_siki_b.tarseq_80                             26391  5 -  18771707 T------GC--------TC
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  4061  5 +      4512 T------GT--------TC
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                32152  5 +   3668941 A------TT--------TC
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65568032  5 -  95554990 T------TC--------TC
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            4758  5 +      6470 T------TC--------TC
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65670365  5 +  89412551 T------TC--------TC
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Octodon_degus.JH651621.1                                3686901  4 +  10294119 G-------T--------CC
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             680575  5 -   3126709 A------TT--------TA
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1080695  5 +   1425656 T------GT--------TC
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         37984  5 +     78940 T------TT--------TC
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  126053  9 +    145789 C------CC----CTTTTG
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 I 31
s Onychomys_torridus.OnyTor_scaffold_12578                  38232  9 +     62360 T------CC----CTTTTG
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 I 31
s Orcinus_orca.KB316965.1                                 7225711  5 -   7562323 T------TT--------TC
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              60948  5 -     66828 T------TC--------CT
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 I 3
s Oryctolagus_cuniculus.CM000803.1                      141877376  5 + 163896628 T------TT--------TC
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      309447  5 -    505867 a------tt--------tc
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        1664  5 -     53940 T------TC--------TC
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18009645  5 -  38779656 T------TC--------TC
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134078284  5 - 275406953 T------GT--------TC
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      79499  5 +    140051 T------GT--------TC
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  35336  5 +    295523 A------TT--------TT
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3639086  5 +  18214204 A------TT--------TT
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5028762  5 -   6340057 A------TT--------TT
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1067133  5 -   1292953 T------GT--------TC
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188157701  5 - 188283584 T------GT--------TC
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                               793  5 +     25005 T------GT--------TC
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47515078  5 +  47705337 T------GT--------TC
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 69068  5 -    104429 T------GT--------TC
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    7597  5 +     14967 T------GT--------TC
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 3462  5 -      7628 T------GT--------TC
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    116820  5 -    135482 T------TT--------TC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           6349  5 -     23713 T------TC--------TC
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            25663  5 -     27972 T------TC--------TC
i Perodicticus_potto.k141_713187                        C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    14631  5 -     36578 T------AT--------CC
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_648925              315  5 -       346 T------TT--------TC
i Phocoena_phocoena.PhoPho_flattened_line_648925        C 0 C 0
s Piliocolobus_badius.k141_1987485                           3478  5 -      5908 T------GT--------TC
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       4096  5 -     17985 T------GT--------TC
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            3463  5 +      7694 T------GT--------TC
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26741947  5 +  26888534 T------GT--------TC
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pithecia_albicans.k141_991845                             44889 11 -     61926 TGTTCCTGT--------TC
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        26272 11 +     78826 TGTTCCTGT--------TC
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                             10320 11 -     15800 TGTTCCTGT--------TC
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        13519 11 -     16101 TGTTCCTGT--------TC
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          6748 11 +      9673 TGTTCCTGT--------TC
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13475748 11 -  19735023 TGTTCCTGT--------TC
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           14651 11 -     31692 TGTTCCTGT--------TC
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           6632  5 +     21690 T------TT--------TC
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       23987 11 +     44506 TGTTCCTGC--------TC
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        24200 11 +     67491 TGTTCCTGC--------TC
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      14439 11 -     98129 TGTTCCTGC--------TC
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     24039 11 +    147771 TGTTCCTGC--------TC
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                          675 11 -     43940 TGTTCCTGC--------TC
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          4758 11 -     55515 TGTTCCTGC--------TC
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         24112 11 +    152463 TGTTCCTGC--------TC
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       1829 11 -    119457 TGTTCCTGC--------TC
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         13835 11 +    134592 TGTTCCTGC--------TC
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          24422 11 -     75465 TGTTCCTGC--------TC
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              188585  5 -    373494 T------GT--------TC
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19809232  5 +  19899266 T------GT--------TC
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               7225  5 -     15069 T------GT--------TC
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              7340  5 +     14865 T------GT--------TC
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6849506  5 +  12164890 T------TT--------TC
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     19680  5 -     30946 n------nn--------nn
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         4585  5 +     11805 T------TT--------TC
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           43933  5 +     52369 T------TT--------TC
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         36320  5 -     44753 T------TT--------TC
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            18243  5 +     27322 T------TT--------TC
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       17877  5 -     53241 T------TT--------TC
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         40141  5 -     48185 T------TT--------TC
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Pteronotus_parnellii.KE867983.1                            5104  5 -     27784 T------TT--------TC
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        247711  5 -    344369 A------TT--------TC
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13246997  5 -  17261082 T------TT--------TC
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             604948  5 -   3946241 T------TT--------TC
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131535357  5 - 161321710 A------TT--------TT
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             31329  5 +     56732 T------GT--------TC
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6807823  5 +   6970761 T------GT--------TC
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             7216  5 +     18040 T------GT--------TC
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                16807  5 +     68503 T------GT--------TC
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1788873  5 +   2252614 G------TT--------TC
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                            1612  5 -     17045 T------GT--------TC
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206379100  5 - 206558726 T------GT--------TC
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44858002  5 -  45163003 T------GT--------TC
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                20333  4 +    109198 T-------T--------TC
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       8960  5 +     12214 T------TT--------TC
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15673836 11 -  43202129 CATTCCTGT--------TC
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        5749 11 +     34089 CATTCCTGT--------TC
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              5691 11 -     60842 CATTCCTGT--------TC
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              5784 11 +     67014 CATTCCTGT--------TC
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              5762 11 +     60816 CATTCCTGT--------TC
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 5699 11 -     76454 CATTCCTGT--------TC
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17342431 11 -  30362882 TATTCCTGT--------TC
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         21792 11 -     62485 TATTCCTGT--------TC
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   37711  5 -    114521 G------CT--------TT
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        4832  5 +     15331 T------GT--------TC
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      10207  5 +     20762 T------GT--------TC
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         120212  5 +    130994 T------GT--------TC
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           38991  5 +     46263 T------GT--------TC
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     32136  5 +     42640 T------GT--------TC
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        15158  5 +     30600 T------GT--------TC
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  101392  9 -    120886 T------TG----CTTTTG
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 I 31
s Solenodon_paradoxus.SolPar_flattened_line_1012            19908  5 +    739146 C------TA--------TT
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17767472  5 -  27805282 C------AT--------AT
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2240779  1 +   2842873 T------------------
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             236086  5 -    276980 A------TG--------TC
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            28602  5 +     62062 A------TT--------TT
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189273109  5 + 218635234 T------TT--------AC
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        16335  5 -  13920577 T------GT--------TC
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                1302  5 +     20549 T------TT--------TC
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               15726  5 +     45698 A------CT--------CC
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      808153  5 +   1148477 T------TT--------TC
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  58866  5 +     99546 T------TT--------TC
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194009229  5 - 194193292 T------GT--------TC
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             39984  5 -     47444 T------TT--------CC
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  6506  3 +      6782 T------TT----------
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  137082  3 -    259118 T------TT----------
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        28479  5 +     38948 T------GT--------TC
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   22039  5 -     32910 T------GT--------TC
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      3940  5 -     12939 t------gt--------tc
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       3368  5 -     14244 T------GT--------TC
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           44766  5 -     54611 T------GT--------TC
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        2562  5 -     11566 T------GT--------TC
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     4746  5 -     15592 T------GT--------TC
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          3398  5 +     14371 T------GT--------AC
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   1684  5 +     12481 T------GT--------TC
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        1559  5 -     24393 T------GT--------TC
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       6809  5 -     28054 T------GT--------TC
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44661593  5 -  44834318 T------GT--------TC
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       3910  5 +     13828 T------GT--------TC
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   6153  5 +     90398 T------TT--------TC
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16086844  4 +  31416278 -------TT--------CC
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2794454  5 -   3938065 t------tt--------tt
i Tupaia_chinensis.KB320831.1                           I 32 C 0
s Tursiops_truncatus.MRVK01000923.1                      69314427  5 -  96451834 T------TT--------TC
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   8278  5 +     10241 G------TT--------TT
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6515831  5 +  28682327 A------TT--------TC
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  6141  5 -     20643 T------TT--------TC
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             25676  5 -     33872 T------TT--------TC
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1525647  5 -   2331223 t------tc--------CC
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                139547  5 -    281493 A------TT--------TC
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       127894  5 -    134049 T------TT--------TC
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        215302  5 -    227762 A------TT--------TA
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     16836  5 -     20485 C------CT--------AT
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           7919  5 -      8775 T------TT--------TC
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Ochotona_princeps.JH802095.1                            4996729 2205 -  23139505 I
e Perognathus_longimembris.PerPac_flattened_line_19359        892 695 +     49596 I
e Dipodomys_ordii.KN672545.1                              3657363 894 +   4240102 I
e Procavia_capensis.ProCapCap_scaffold_149274                2467 1156 -      9567 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Megaderma_lyra.MegLyr_scaffold_3562                       64783 239 -    234502 I
e Heterohyrax_brucei.HetBruBak_scaffold_25354               61360 1157 +     73687 I
e Echinops_telfairi.JH980316.1                           22999931  2 -  44670279 I
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1008 325 -      5782 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19677 266 -    119109 I
e Tupaia_tana.TupTan_flattened_line_68454                    6507 55 +     13056 I
e Tarsius_wallacei.k141_48636                               60532 3805 +     65473 I
e Tarsius_lariang.k141_609102                               27216 3812 +     42269 I
e Rattus_norvegicus.chr11                                13915860 1475 +  90463843 I
e Psammomys_obesus.NESX01026517.1                           36530 59 +     77221 I
e Peromyscus_maniculatus.KI615518.1                       4951275  0 -   8017169 C
e Dolichotis_patagonum.DolPat_scaffold_14102                36772 276 -     73477 I
e Dasyprocta_punctata.DasPun_flattened_line_634             59553 276 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                18462 277 +     26546 I
e Ctenodactylus_gundi.CteGun_scaffold_447                  209424  0 -    956709 C
e Cephalopachus_bancanus.k141_702587                         8788 3391 +     21754 I
e Cavia_tschudii.CavTsc_scaffold_488                       177453 271 +    436027 I
e Cavia_porcellus.DS562889.1                             15799262 290 -  24440124 I
e Cavia_aperea.AVPZ01000278.1                            15787326 288 -  24422027 I
e Carlito_syrichta.NW_007248099.1                          309764 3411 +    345090 I
e Pan_paniscus.CM003386.1                               127575888 480 - 205426864 I
e Pan_troglodytes.CM009241.2                            120153042 480 - 196562556 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               14989 15 +    209709 C-C-T--------------------A----ACTT-CAG---GC-------AT
s Acinonyx_jubatus.LLWD01000356.1                         2035002 15 +   3721120 C-C-T--------------------A----ATTT-CAG---AC-------AT
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    114849 18 -    189883 C-C-T--------------------G----AATGGTTT----GCGA----TT
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 31 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10658565 15 +  23371972 C-C-T--------------------A----ATTT-CAG---GC-------AT
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7095699 15 -  16596857 c-c-t--------------------a----attt-caG---AA-------AC
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   18359 15 -     22067 A-C-T--------------------C----ATTT-TGA---GT-------AT
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   2716 15 -     60446 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         3433 15 -     29318 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         2369 15 +     38766 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          3327 15 -     80423 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            11314 15 -     18050 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_1710068                               1030 15 +      1555 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Alouatta_caraya.k141_1710068                          C 0 C 0
s Alouatta_discolor.k141_811576                             11987 15 -     21359 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                1610 15 +      2129 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_2177643                           987 15 -      1868 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Alouatta_macconnelli.k141_2177643                     C 0 C 0
s Alouatta_nigerrima.k141_3537692                            1036 15 +      1660 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Alouatta_nigerrima.k141_3537692                       C 0 C 0
s Alouatta_palliata.k141_2764429                              956 15 -      1480 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Alouatta_palliata.k141_2764429                        C 0 C 0
s Alouatta_puruensis.k141_131505                              243 15 +      4855 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Alouatta_puruensis.k141_131505                        C 0 C 0
s Alouatta_seniculus.k141_1531728                            1171 15 -      1692 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Alouatta_seniculus.k141_1531728                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3521138 15 +   4113121 C-C-T--------------------A----ATTT-CGA---GC-------AT
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      391542 15 -    631301 C-T-T--------------------A----ACAG-TAG---GC-------AT
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            31723 15 +     33004 C-C-T--------------------A----ACTT-CAA---GC-------AT
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 63660 15 +     78111 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            6603 15 +     22701 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5750560 15 +   9889416 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             7149 15 -    104377 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               7151 15 +     23246 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_231055                     1040 15 -      2492 A-C-T--------------------A----ACTT-TGG---GT-------AT
i Aplodontia_rufa.AprRuf_scaffold_231055                C 0 I 18
s Arctocebus_calabarensis.k141_587554                        1947 15 +      9265 C-C-A--------------------A----ACTT-CAG---GC-------CT
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 9959 15 -     29036 C-T-T--------------------A----ACAG-TAG---GC-------AT
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9540425 15 +  39197703 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             61696 15 +     85812 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                12709 15 +     89302 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             17212 15 -     58268 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             65204 15 +    119057 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               7175 15 -     25888 C-C-T--------------------A----ACTT-TAG---GC-------AT
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 7682 15 -     16375 C-C-T--------------------A----ATTT-CAG---GT-------AT
i Avahi_laniger.k141_2840928                            C 0 I 19
s Avahi_peyrierasi.k141_798820                               1298 15 +      6337 C-C-T--------------------A----ATTT-CAG---GT-------AT
i Avahi_peyrierasi.k141_798820                          C 0 I 19
s Balaenoptera_acutorostrata.KI537095.1                  26381201 15 +  51448160 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        6373 15 -     13118 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   44244 15 -     72089 C-C-T--------------------A----ATTT-CAA---GC-------AT
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6560867 19 +   6870073 C-C-T--------------------AACTAACTT-CAA---GC-------AT
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138140982 19 - 161108492 C-C-T--------------------AACTAACTT-CAA---GC-------AT
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     573523 15 -    998990 C-C-T--------------------A----ACTT-CAA---GC-------AT
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136296715 19 - 158972876 C-C-T--------------------AACTAACTT-CAA---GC-------AT
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1233796 19 -   1914593 C-C-T--------------------AACTAACTT-CAA---GC-------AT
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               115062 15 -    171031 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 14091 15 +    125063 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                16134 15 -    216513 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        8677 15 -    134917 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3220547 16 -   8989139 C-CTT--------------------A----ATTT-CAG---GC-------AC
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           398248 16 -  15254737 C-CTT--------------------A----ATTT-CAG---GC-------AC
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2973984 16 +   6889770 C-CTT--------------------A----ATTT-CAG---GC-------AC
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11520715 15 +  39901454 C-T-T--------------------A----ATTT-CAG---GC-------AT
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   15740 15 +     87036 C-T-T--------------------A----ATTT-CAG---GC-------AT
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11267384 15 -  35597290 C-T-T--------------------A----ATTT-CAG---GC-------AT
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11089917 15 +  39895921 C-T-T--------------------A----ATTT-CAG---GC-------AT
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16456930 15 -  44759192 C-T-T--------------------A----ATTT-CAG---GC-------AT
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21326209 15 + 157394656 C-C-T--------------------A----ATTT-CAA---GC-------AT
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135707437 15 - 157403528 C-C-T--------------------A----ATTT-CAA---GC-------AT
i Capra_hircus.CM004562.1                               C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               60749 15 +     67245 C-T-T--------------------A----ACAG-TAG---GC-------AT
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   32114 15 +     33760 A-C-T--------------------A----ACTT-CAG---GC-------AT
i Castor_canadensis.CasCan_scaffold_47037               C 0 I 15
s Catagonus_wagneri.CatWag_scaffold_1305                   159872 15 -    276539 C-C-C--------------------A----GCTT-CAG---GT-------AT
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 I 1
s Cebus_albifrons.Contig22                               18891897 15 -  29618158 C-C-T--------------------A----ACTT-CAG---GG-------AT
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 9441 15 -     26817 C-C-T--------------------A----ACTT-CAG---GG-------AT
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                13684 15 +     25043 C-C-T--------------------A----ACTT-CAG---GG-------AT
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4364918 15 +   7569818 C-C-T--------------------A----ATAT-CAG---GC-------CC
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         4675 15 -      9338 C-C-T--------------------A----ATAT-CAG---GC-------CC
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6556663 15 +   6739814 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      28137 15 +     60454 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          3344 15 -     21101 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         60654 15 -    107033 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        3533 15 -     17608 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                           692 15 +     45019 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                            776 15 +     15177 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          3576 15 +     16677 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           25746 15 +     35983 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11992274 15 +  12117833 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46479032 15 +  46592721 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      42586 15 -     45581 C-C-T--------------------A----ACTC-CAG---GC-------AT
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       3588 15 +     35577 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        3361 15 -     25661 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        3340 15 -     17744 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        22946 15 +     37128 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           3771 14 -      6963 --C-T--------------------A----ACTT-CAG---GC-------AC
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 I 14
s Cheirogaleus_major.k141_1157592                           59953 15 -     68416 C-C-T--------------------A----ATTT-CAG---GC-------AT
i Cheirogaleus_major.k141_1157592                       C 0 I 19
s Cheirogaleus_medius.k141_133808                            9005 15 +     13308 C-C-T--------------------A----ATTT-CAG---GC-------AT
i Cheirogaleus_medius.k141_133808                       C 0 I 19
s Cheracebus_lucifer.k141_619653                             6719 15 -     18223 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             23737 15 +     25473 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           42777 15 +     57117 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          47456 15 +     54541 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15962723 15 +  43084221 A-T-T--------------------A----ACTG-TAG---GA-------AT
i Chinchilla_lanigera.JH721867.1                        C 0 I 15
s Chiropotes_israelita.k141_1189915                         72263 15 +    196370 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          16443 15 +     40510 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15140943 15 -  15256731 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      35552 15 -     53260 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101146111 15 + 101219884 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                17519 15 -     21363 C-C-T--------------------A----ACTT-CAG---GT-------AT
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           762824 15 +    964067 C-C-T--------------------A----ACTT-CAG---GT-------AT
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10888103 15 +  10971483 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147666031 15 + 156195979 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            18014 15 +     23629 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60620580 16 +  78930452 CTC-T--------------------A----TCTT-CAG---GT-------AT
i Condylura_cristata.JH655880.1                         C 0 I 22
s Cricetomys_gambianus.CriGam_scaffold_949                 279374 18 -    399297 C-C-T--------------------G----AATGCTATGT-GT-------GT
i Cricetomys_gambianus.CriGam_scaffold_949              I 32 C 0
s Cricetulus_griseus.LT883672.1                          53030296 18 +  72327488 C-A-T--------------------G----AATGGTATATA-C-------AT
i Cricetulus_griseus.LT883672.1                         I 31 C 0
s Crocidura_indochinensis.CroInd_scaffold_848148              556 15 +      1327 T-C-T--------------------A----CCTT-TCT---GT-------AT
i Crocidura_indochinensis.CroInd_scaffold_848148        C 0 I 18
s Cryptoprocta_ferox.CryFer_flattened_line_19014            53054 15 -     70449 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 32079 15 -     67205 A-T-T--------------------A----ACTG-TAG---GA-------AC
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 I 15
s Dasypus_novemcinctus.JH568778.1                          184618 15 -   6883506 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Dasypus_novemcinctus.JH568778.1                       C 0 I 14
s Daubentonia_madagascariensis.ctg11                     16845817 15 +  31942871 C-C-T--------------------A----ACTC-CAG---GC-------GT
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80037829 15 -  96802777 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18700037 15 -  18957592 C-T-T--------------------A----ACAG-TAG---GC-------AT
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 323570 15 +    993696 C-C-T--------------------A----ATAT-CAG---GC-------AC
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   4222 15 +    151128 C-C-T--------------------A----ATAT-CAG---GC-------CC
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   157922 15 +    228994 A-T-T--------------------A----ACTG-TAG---GA-------AT
i Dinomys_branickii.DinBra_scaffold_1996                C 0 I 15
s Eidolon_helvum.KE772537.1                                 13279 15 +     24177 c-c-t--------------------a----aatt-cag---GC-------AT
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1492482 15 +   1727528 C-C-T--------------------A----ACTT-CAA---GC-------AT
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 I 8
s Elephantulus_edwardii.JH947210.1                        7829727 15 +  15467074 C-A-T--------------------C----ATTT-CAA---GC-------AT
i Elephantulus_edwardii.JH947210.1                      C 0 I 13
s Ellobius_lutescens.LOEQ01003611.1                        240469 12 -    369425 C-C-T--------------------G----AATGGTGT--------------
i Ellobius_lutescens.LOEQ01003611.1                     I 30 I 2
s Ellobius_talpinus.LOJH01090055.1                           7639 12 -      7838 C-C-T--------------------G----AATGGTGT--------------
i Ellobius_talpinus.LOJH01090055.1                      I 31 I 2
s Eptesicus_fuscus.JH977687.1                             4707973 11 +   6522550 --T-T--------------------A----GC----AG---GT-------AT
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Enhydra_lutris.KZ291749.1                              85873222  1 +  99434291 C---------------------------------------------------
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Equus_asinus.JREZ01000062.1                             5854208 15 -   7175178 C-C-T--------------------A----ATAT-CAG---GC-------AC
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13352708 15 +  41866177 C-C-T--------------------A----ATAT-CAG---GC-------AC
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          14198 15 +     92910 C-C-T--------------------A----ATAT-CAG---GC-------AC
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erythrocebus_patas.Contig8                             48778122 15 -  48907691 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          316041 15 +    330699 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             62497 15 +     89355 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              5992 15 +     13586 C-C-T--------------------A----ATTT-CAG---GC-------AT
i Eulemur_albifrons.k141_715837                         C 0 I 19
s Eulemur_collaris.k141_311830                               5924 15 -      6809 C-C-T--------------------A----ATTT-CAG---GC-------AT
i Eulemur_collaris.k141_311830                          C 0 I 19
s Eulemur_coronatus.k141_3240342                            12398 15 +     36558 C-C-T--------------------A----ATTT-CAG---GC-------AT
i Eulemur_coronatus.k141_3240342                        C 0 I 19
s Eulemur_flavifrons.k141_903901                             8719 15 +     60246 C-C-T--------------------A----ATTT-CAG---GC-------AT
i Eulemur_flavifrons.k141_903901                        C 0 I 37
s Eulemur_fulvus.k141_653297                                12197 15 +    109717 C-C-T--------------------A----ATTT-CAG---GC-------AT
i Eulemur_fulvus.k141_653297                            C 0 I 19
s Eulemur_macaco.k141_747087                                  182 15 -     19505 C-C-T--------------------A----ATTT-CAG---GC-------AT
i Eulemur_macaco.k141_747087                            C 0 I 19
s Eulemur_mongoz.k141_825972                                16857 15 +     27497 C-C-T--------------------A----ATTT-CAG---GC-------AT
i Eulemur_mongoz.k141_825972                            C 0 I 19
s Eulemur_rubriventer.k141_411740                           19313 15 +     26808 C-C-T--------------------A----ATTT-CAG---GC-------AT
i Eulemur_rubriventer.k141_411740                       C 0 I 19
s Eulemur_rufus.k141_1620292                                34051 15 +     46535 C-C-T--------------------A----ATTT-CAG---GC-------AT
i Eulemur_rufus.k141_1620292                            C 0 I 19
s Eulemur_sanfordi.k141_186399                              16777 15 -     29447 C-C-T--------------------A----ATTT-CAG---GC-------AT
i Eulemur_sanfordi.k141_186399                          C 0 I 19
s Felis_catus.CM001386.2                                129893974 15 - 159252932 C-C-T--------------------A----ATTT-CAG---AC-------AT
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129281058 15 - 158578461 C-C-T--------------------A----ATTT-CAG---AC-------AT
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 22198 15 +     52776 C-C-T--------------------A----ATTT-CAG---AC-------AT
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13892391 15 -  19261668 A-T-T--------------------G----ACTT-TAA---GA-------AT
i Fukomys_damarensis.KN123630.1                         C 0 I 12
s Galago_moholi.ctg555                                     211854 15 -    847004 C-C-A--------------------A----ACTT-CAG---GC-------CT
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           14228 15 -     43889 C-C-A--------------------A----ACTT-CAG---GC-------CT
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          11294 15 +     27357 C-C-A--------------------A----ACTT-CAG---GC-------CT
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               157320 15 +    324696 C-C-T--------------------A----ACAT-CGG---GC-------AT
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    182263 15 -    189561 C-C-T--------------------A----ACTT-CAA---GC-------AT
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           14788 15 -     18683 A-C-T--------------------A----AATT-CAA---GC-------AT
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               6703 15 -     14630 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119653803 15 - 195582420 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   78202 15 +    118900 A-T-C--------------------A----ACTT-CAA---TC-------AC
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         2782 15 +     10286 C-C-T--------------------A----ATAT-CAG---GC-------AT
i Hapalemur_alaotrensis.k141_1280836                    C 0 I 19
s Hapalemur_gilberti.k141_279011                             1262 15 -     11661 C-C-T--------------------A----ATTT-CAG---GC-------AT
i Hapalemur_gilberti.k141_279011                        C 0 I 19
s Hapalemur_griseus.k141_1387522                             6588 15 +     56096 C-C-T--------------------A----ATTT-CAG---GC-------AT
i Hapalemur_griseus.k141_1387522                        C 0 I 19
s Hapalemur_meridionalis.k141_186231                        29837 15 -     42470 C-C-T--------------------A----ATTT-CAG---GC-------AT
i Hapalemur_meridionalis.k141_186231                    C 0 I 19
s Hapalemur_occidentalis.k141_797938                        46465 15 -     54384 C-C-T--------------------A----ATTT-CAG---GC-------AT
i Hapalemur_occidentalis.k141_797938                    C 0 I 19
s Helogale_parvula.HelPar_flattened_line_22962              18249 15 +     53719 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                28498 15 -     91191 C-C-T--------------------A----ATTT-CAA---GC-------AT
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2552114 15 +  31725842 A-T-T--------------------A----ACTT-TAA---GA-------AT
i Heterocephalus_glaber.JH602058.1                      C 0 I 5
s Hippopotamus_amphibius.HipAmp_scaffold_1308              148124 15 +    277961 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      279436 11 -    477199 C-C-T--------------------A----ACAT-CAG--------------
i Hipposideros_armiger.JXIK01001085.1                   C 0 I 7
s Hipposideros_galeritus.HipGal_scaffold_104691              8585 11 -      9143 C-T-T--------------------A----ACAT-CAG--------------
i Hipposideros_galeritus.HipGal_scaffold_104691         I 61 I 7
s Hoolock_leuconedys.ctg79                                      6393 15 -   7690867 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Hoolock_leuconedys.ctg79                                 C 0 I 67
s Hyaena_hyaena.HyaHya_flattened_line_20729                 18320 15 -     67322 C-C-T--------------------A----ACCT-CAG---GC-------AT
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hylobates_abbotti.k141_164775                              1176 15 -      2073 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Hylobates_abbotti.k141_164775                         C 0 C 0
s Hylobates_agilis.k141_1362131                               185 15 +      1075 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Hylobates_agilis.k141_1362131                         C 0 I 67
s Hylobates_klossii.k141_183401                               729 15 -      1272 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Hylobates_klossii.k141_183401                         C 0 I 67
s Hylobates_pileatus_b.ContigUN                                 14626081 15 -  25970782 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_950183                              777 15 +      2027 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Hylobates_muelleri.k141_950183                        C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             35241 15 -     60944 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     7180 15 +     22540 A-A-T--------------------A----ACTT-TAG---CA-------AT
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7126864 13 +  13083262 ----T--------------------A----ACTT-TGG---GC-------AC
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_5141390                                   1315 15 -      3181 C-C-T--------------------A----ATTT-CAG---GT-------AT
i Indri_indri.k141_5141390                              C 0 I 19
s Inia_geoffrensis.IniGeo_flattened_line_66725              10035 15 +     17520 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH727545.1                                 1971 15 -      4668 C-C-T--------------------C----ATTT-TGA---GC-------AT
i Jaculus_jaculus.JH727545.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               24637 15 +     37189 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          51294 15 -    147782 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    4643 11 +     26176 --T-T--------------------A----GC----AG---GT-------AT
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258408140 15 - 285822530 C-C-T--------------------A----ATTT-CAG---GC-------AT
i Lemur_catta.scaffold_1                                C 0 I 19
s Lepilemur_ankaranensis.k141_884009                        24891 15 +     39228 C-C-T--------------------A----ATTT-TAG---GC-------AT
i Lepilemur_ankaranensis.k141_884009                    C 0 I 19
s Lepilemur_dorsalis.k141_134267                            54277 15 +     63517 C-C-T--------------------A----ATTT-TAG---GC-------AT
i Lepilemur_dorsalis.k141_134267                        C 0 I 19
s Lepilemur_ruficaudatus.k141_617879                        79539 15 +    116806 C-C-A--------------------A----ATTT-TAG---GC-------AT
i Lepilemur_ruficaudatus.k141_617879                    C 0 I 19
s Lepilemur_septentrionalis.k141_578524                     32530 15 -     33031 C-C-T--------------------A----ATTT-TAG---GC-------AT
i Lepilemur_septentrionalis.k141_578524                 C 0 I 19
s Leptonychotes_weddellii.KB714749.1                      3087001 15 -   3498232 C-C-T--------------------A----ATTT-CAG---GC-------AT
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    14343 15 +     22452 C-C-T--------------------A----ACTT-TAA---GC-------GT
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            136991 15 +   3060487 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19249740 15 +  19376315 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           11583 15 +     84689 C-C-A--------------------A----ACTT-CAG---GC-------CT
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3779332 15 +   6799190 C-C-A--------------------A----ACTT-CAG---GC-------CT
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20595835 15 -  62548349 C-T-T--------------------A----ACTT-CAG---GC-------AT
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11089373 15 +  39895028 C-T-T--------------------A----ATTT-CAG---GC-------AT
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             21497 15 +     74745 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12707957 15 +  12821369 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                 535 15 -     26467 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           48402 15 +     63263 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                  512 15 -     26361 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 3689 15 -      7381 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  46927 15 -     79256 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196037029 15 + 196197964 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11447195 15 +  11645122 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   5881 15 -     46448 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                3547 15 -     13212 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 17224 15 -     55006 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43842330 15 +  43892939 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               18511 15 -     24607 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               5878 15 -     27140 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                701995 15 +    802869 C-C-T--------------------A----AGTT-CAG---AC-------AT
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43438912 15 -  43563597 C-C-T--------------------A----ACTT-CAG---AC-------AT
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4451726 15 -   4543643 C-C-T--------------------A----ACTT-CAG---AC-------AT
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            147077 15 +    252755 C-C-T--------------------A----AGTT-CAG---AT-------AT
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             37220 15 +     58827 C-C-T--------------------A----AGTT-CAG---GT-------AT
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36874784 13 +  64221397 ----T--------------------A----ACTT-TGG---GC-------AT
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             2039 15 -     87323 C-C-T--------------------A----ATTT-CAG---GC-------AT
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               14391 18 +     15977 C-T-G--------------------G----AACAGTAT----A-T-GT--TT
i Meriones_unguiculatus.MerUng_scaffold_52233           I 31 C 0
s Mesocricetus_auratus.KB708139.1                         1048101 18 -  26018355 C-A-T--------------------G----GATGGAATGTA-C-------GT
i Mesocricetus_auratus.KB708139.1                       I 31 C 0
s Mesoplodon_bidens.MesBid_scaffold_475714                    138 15 +       551 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Mesoplodon_bidens.MesBid_scaffold_475714              C 0 I 68
s Microcebus_murinus.CM007691.1                          16511172 15 +  47401472 C-C-T--------------------A----ATTT-CAG---GC-------AT
i Microcebus_murinus.CM007691.1                         C 0 I 19
s Microgale_talazaci.MicTal_scaffold_34660                  39324 15 -     48017 T-C-T--------------------G----TGTA-TGT---AT-------GT
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               23928 15 -     32043 C-T-T--------------------A----ACAG-TAG---GC-------AT
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22820828 12 -  98408828 C-C-T--------------------G----AATGGTGT--------------
i Microtus_ochrogaster.CM001673.1                       I 31 I 2
s Miniopterus_natalensis.LDJU01000022.1                   8212006 15 +  10048721 C-T-T--------------------A----ACAG-CAG---GC-------AC
i Miniopterus_natalensis.LDJU01000022.1                 C 0 I 21
s Miniopterus_schreibersii.MinSch_scaffold_24116            36495 15 +     45743 C-T-T--------------------A----ACAG-CAG---GC-------AC
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 I 21
s Miopithecus_ogouensis.k141_2935907                         3473 15 +     29742 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        12528 15 -    104932 C-C-T--------------------A----ATTT-CAG---GC-------AT
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     6561 15 +      8497 C-C-T--------------------A----ATTT-CAG---GC-------AT
i Mirza_zaza.k141_226143                                C 0 I 19
s Monodon_monoceros.MonMon_M_scaffold_5598                 147419 15 +    154973 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                162463 15 +    265003 C-T-T--------------------A----ATAG-AAG---GC-------AT
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  2513 15 -     19904 C-C-T--------------------A----ACTT-CAA---GC-------AT
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  145948 15 -    168139 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          23451 12 -    100666 C-T-T--------------------A----GT----AG---GT-------TT
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             13299 15 +     98495 A-T-T--------------------A----ATTT-CAA---GC-------AT
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4425405 15 -  28371801 c-c-t--------------------a----atct-caG---GC-------AT
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     91406 15 -    117718 A-T-T--------------------C----GTTG-TGG---GA-------AC
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 I 15
s Myotis_brandtii.KE161952.1                               970312 12 +   8389877 C-T-T--------------------A----GC----AG---GT-------AT
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5021737 12 +   6462685 C-T-T--------------------A----GC----AG---GT-------AT
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3467815 12 -   3747815 C-T-T--------------------A----GC----AG---GT-------AT
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        13058 12 +     66751 C-T-T--------------------A----GC----AG---GT-------AT
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             6065 15 -      8794 C-C-T--------------------A----ACTT-CGG---GC-------AT
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            119219 15 +    362372 a-c-t--------------------a----aatg-taa---gg-------gt
i Nannospalax_galili.KL201303.1                         I 38 C 0
s Nasalis_larvatus.k141_153429                               9950 15 +     48152 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4485918 15 -  14209539 C-C-T--------------------A----ATTT-CAG---GC-------AT
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3952031 15 -   4490290 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Nomascus_annamensis.k141_224620                             547 15 -      2316 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Nomascus_annamensis.k141_224620                       C 0 C 0
s Nomascus_concolor.k141_226614                              2644 15 -      5092 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_1032971                            218 15 -      1918 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Nomascus_gabriellae.k141_1032971                      I 5 C 0
s Nomascus_siki_b.tarseq_80                             26396 15 -  18771707 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  4066 15 +      4512 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                32157 15 +   3668941 C-T-T--------------------A----ATTT-CAG---GC-------AT
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65568037 15 -  95554990 C-C-A--------------------A----ACTT-CAA---TC-------CT
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            4763 15 +      6470 C-C-A--------------------A----ACTT-CAA---TC-------CT
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65670370 15 +  89412551 C-C-A--------------------A----ACTT-CAG---GC-------CT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Octodon_degus.JH651621.1                                3686905 15 +  10294119 A-C-T--------------------A----ACTG-TAG---GA-------AG
i Octodon_degus.JH651621.1                              C 0 I 15
s Odobenus_rosmarus.KB229369.1                             680580 15 -   3126709 C-C-T--------------------A----ATTT-CAG---GC-------AT
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1080700 15 +   1425656 C-C-T--------------------A----ACTT-CAA---GC-------AT
i Odocoileus_virginianus.KZ101650.1                     C 0 I 8
s Okapia_johnstoni.LVCL01S0017931.1                         37989 15 +     78940 C-C-T--------------------A----ACTT-CAA---GC-------AT
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  126093 12 +    145789 C-C-T--------------------G----AATGGTGT--------------
i Ondatra_zibethicus.OndZib_scaffold_6821               I 31 I 2
s Onychomys_torridus.OnyTor_scaffold_12578                  38272 15 +     62360 C-C-C--------------------A----AAAGGTAT----T-------AT
i Onychomys_torridus.OnyTor_scaffold_12578              I 31 C 0
s Orcinus_orca.KB316965.1                                 7225716 15 -   7562323 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              60956 11 -     66828 ------------------------------ACTT-CAG---GA-------GT
i Orycteropus_afer.OryAfe_flattened_line_13509          I 3 C 0
s Oryctolagus_cuniculus.CM000803.1                      141877381 15 + 163896628 C-C-T--------------------A----ACTT-TAA---GC-------AT
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      309452 15 -    505867 t-t-t--------------------a----attt-cag---gC-------AT
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        1669 15 -     53940 C-C-A--------------------A----ATTT-CAG---GC-------CT
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18009650 15 -  38779656 C-C-A--------------------A----ACTT-CAG---GC-------CT
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134078289 15 - 275406953 C-C-T--------------------A----ATTT-CAA---GC-------AT
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      79504 15 +    140051 C-C-T--------------------A----ATTT-CAA---GC-------AT
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  35341 15 +    295523 C-C-T--------------------A----ATTT-CAG---AC-------AT
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3639091 15 +  18214204 C-C-T--------------------A----ATTT-CAG---AC-------AT
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5028767 15 -   6340057 C-C-T--------------------A----ATTT-CAG---AC-------AT
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1067138 15 -   1292953 C-C-T--------------------A----ATTT-GAA---GC-------AT
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188157706 15 - 188283584 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                               798 15 +     25005 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47515083 15 +  47705337 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 69073 15 -    104429 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    7602 15 +     14967 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 3467 15 -      7628 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    116825 15 -    135482 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           6354 15 -     23713 C-C-A--------------------A----ACTT-CAG---GC-------CT
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            25668 15 -     27972 C-C-A--------------------A----ACTT-CAG---GC-------CT
i Perodicticus_potto.k141_713187                        C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    14636 15 -     36578 T-T-T--------------------A----AGTA-TAA---GA-------AT
i Petromus_typicus.PetTyp_scaffold_33007                C 0 I 15
s Phocoena_phocoena.PhoPho_flattened_line_648925              320 15 -       346 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Phocoena_phocoena.PhoPho_flattened_line_648925        C 0 N 0
s Piliocolobus_badius.k141_1987485                           3483 15 -      5908 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       4101 15 -     17985 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            3468 15 +      7694 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26741952 15 +  26888534 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pithecia_albicans.k141_991845                             44900 15 -     61926 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        26283 15 +     78826 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                             10331 15 -     15800 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        13530 15 -     16101 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          6759 15 +      9673 C-C-T--------------------A----ACTT-CAG---GT-------AT
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13475759 15 -  19735023 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           14662 15 -     31692 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           6637 15 +     21690 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       23998 15 +     44506 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        24211 15 +     67491 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      14450 15 -     98129 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     24050 15 +    147771 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                          686 15 -     43940 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          4769 15 -     55515 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         24123 15 +    152463 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       1840 15 -    119457 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         13846 15 +    134592 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          24433 15 -     75465 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              188590 15 -    373494 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19809237 15 +  19899266 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               7230 15 -     15069 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              7345 15 +     14865 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6849511 15 +  12164890 C-C-T--------------------A----ATTT-CAG---GC-------AT
i Prolemur_simus.MPIZ01000048.1                         C 0 I 19
s Propithecus_coquerelli.NW_012147863.1                     19685 15 -     30946 n-n-n--------------------n----nnnn-nnn---nn-------nn
i Propithecus_coquerelli.NW_012147863.1                 C 0 I 19
s Propithecus_coronatus.k141_1353159                         4590 15 +     11805 T-C-T--------------------A----ATTT-CAG---GT-------AT
i Propithecus_coronatus.k141_1353159                    C 0 I 19
s Propithecus_diadema.k141_577245                           43938 15 +     52369 C-C-T--------------------A----ATTT-CAA---GT-------AT
i Propithecus_diadema.k141_577245                       C 0 I 19
s Propithecus_edwardsi.k141_1317105                         36325 15 -     44753 C-C-T--------------------A----ATTT-CAA---GT-------AT
i Propithecus_edwardsi.k141_1317105                     C 0 I 19
s Propithecus_perrieri.k141_7554                            18248 15 +     27322 C-C-T--------------------A----ATTT-CAA---GT-------AT
i Propithecus_perrieri.k141_7554                        C 0 I 19
s Propithecus_tattersalli.k141_907138                       17882 15 -     53241 T-C-T--------------------A----ATTT-CAG---GT-------AT
i Propithecus_tattersalli.k141_907138                   C 0 I 19
s Propithecus_verreauxi.k141_158021                         40146 15 -     48185 C-C-T--------------------A----ATTT-CAG---GT-------AT
i Propithecus_verreauxi.k141_158021                     C 0 I 19
s Pteronotus_parnellii.KE867983.1                            5109 15 -     27784 C-T-T--------------------A----ACAG-CAG---GC-------AC
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        247716 15 -    344369 C-C-T--------------------A----TATT-CAG---GC-------AT
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13247002 15 -  17261082 C-C-T--------------------A----AATT-CAG---GC-------AT
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             604953 15 -   3946241 C-C-T--------------------A----AATT-CAG---GC-------AT
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131535362 15 - 161321710 C-C-T--------------------A----ATTT-CAG---AC-------AT
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             31334 15 +     56732 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6807828 15 +   6970761 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             7221 15 +     18040 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                16812 15 +     68503 C-C-T--------------------A----ACTT-CAA---GC-------AT
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 I 8
s Rhinolophus_sinicus.LVEH01000179.1                      1788878 15 +   2252614 C-C-T--------------------A----ACAT-CAG---GC-------AT
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                            1617 15 -     17045 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206379105 15 - 206558726 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44858007 15 -  45163003 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                20337 15 +    109198 C-C-T--------------------A----AATT-CAG---GC-------TG
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       8965 15 +     12214 C-C-T--------------------A----ATTT-CAA---GC-------AT
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15673847 15 -  43202129 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        5760 15 +     34089 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              5702 15 -     60842 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              5795 15 +     67014 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              5773 15 +     60816 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 5710 15 -     76454 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17342442 15 -  30362882 C-C-T--------------------A----ACTT-CAG---GG-------AT
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         21803 15 -     62485 C-C-T--------------------A----ACTT-CAG---GG-------AT
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   37716 15 -    114521 C-C-T--------------------G----TCTC-CAG---GC-------AT
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 I 22
s Semnopithecus_entellus.k141_1572367                        4837 15 +     15331 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      10212 15 +     20762 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         120217 15 +    130994 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           38996 15 +     46263 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     32141 15 +     42640 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        15163 15 +     30600 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  101432 22 -    120886 C-C-T--------------------G----GATAATAT----TATAATTTAT
i Sigmodon_hispidus.SigHis_scaffold_11332               I 31 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            19913 15 +    739146 C-T-T--------------------G----TCTT-AAG---GA-------AT
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17767477 15 -  27805282 T-C-T--------------------A----CCTT-TAG---AT-------CT
i Sorex_araneus.JH798170.1                              C 0 I 12
s Spermophilus_dauricus.KZ294190.1                        2240780 13 +   2842873 ----T--------------------A----ACTT-TGG---GC-------AC
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             236091 15 -    276980 C-C-T--------------------A----ATTT-CAA---AC-------AT
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            28607 15 +     62062 C-C-T--------------------T----ACTT-CAG---AT-------AT
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189273114 15 + 218635234 C-C-C--------------------A----GCTT-CAG---GT-------AT
i Sus_scrofa.CM000824.4                                 C 0 I 1
s Symphalangus_syndactylus.tarseq_24                        16340 15 -  13920577 C-T-T--------------------A----ACTT-CAG---GC-------AT
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                1307 15 +     20549 C-T-T--------------------A----ACAG-TGG---GC-------AT
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               15731 15 +     45698 C-C-T--------------------A----ACTT-CGG---GC-------AT
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      808158 15 +   1148477 C-C-T--------------------C----ACAT-CAG---GC-------AC
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  58871 15 +     99546 C-C-T--------------------C----ACAT-CAG---GC-------AC
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194009234 15 - 194193292 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             39989 15 -     47444 A-C-T--------------------A----ACTT-TAG---GA-------AT
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 I 15
s Tolypeutes_matacus.TolMat_scaffold_269431                  6509 14 +      6782 --C-T--------------------A----ACTT-CAC---AC-------AC
i Tolypeutes_matacus.TolMat_scaffold_269431             C 0 I 14
s Tonatia_saurophila.TonSau_scaffold_3334                  137085 14 -    259118 --T-T--------------------A----ACAG-TAG---GC-------AT
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        28484 15 +     38948 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   22044 15 -     32910 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      3945 15 -     12939 c-c-t--------------------a----actt-cag---gc-------at
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       3373 15 -     14244 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           44771 15 -     54611 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        2567 15 -     11566 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     4751 15 -     15592 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          3403 15 +     14371 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   1689 15 +     12481 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        1564 15 -     24393 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Trachypithecus_melamera.k141_699241                   C 0 I 106
s Trachypithecus_obscurus.k141_1115109                       6814 15 -     28054 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44661598 15 -  44834318 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       3915 15 +     13828 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   6158 15 +     90398 C-C-T--------------------A----ACTT-CAT---GC-------AT
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16086848 15 +  31416278 T-C-T--------------------A----ACTT-CAG---GC-------AT
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2794459 35 -   3938065 a-a-aaaagaaaaaaaaaaaaagtca----gctt-atG---GT-------AT
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    6562 35 +     13056 A-A-AAAAAAAAAAAAAAAAAAGTCA----GCTT-ATG---GT-------AT
i Tupaia_tana.TupTan_flattened_line_68454               I 55 C 0
s Tursiops_truncatus.MRVK01000923.1                      69314432 15 -  96451834 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   8283 15 +     10241 C-C-T--------------------A----TCTT-CAA---GC-------AT
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 I 22
s Ursus_maritimus.KK498671.1                              6515836 15 +  28682327 C-C-T--------------------A----ATTT-CAG---GC-------AT
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  6146 15 -     20643 C-C-T--------------------A----ATTT-CAG---GC-------AT
i Varecia_rubra.k141_432109                             C 0 I 19
s Varecia_variegata.k141_775891                             25681 15 -     33872 C-C-T--------------------A----ATTT-CAG---GC-------AT
i Varecia_variegata.k141_775891                         C 0 I 19
s Vicugna_pacos.KN269600.1                                1525652 16 -   2331223 C-CTT--------------------A----ATTT-CAG---GC-------AC
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                139552 15 -    281493 C-C-T--------------------A----ATTT-CAG---GC-------AT
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       127899 15 -    134049 A-A-T--------------------A----ACTT-TGA---GC-------AT
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        215307 15 -    227762 C-C-T--------------------A----ATTT-CAG---GC-------AT
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     16841 15 -     20485 G-C-T--------------------C----ATTT-TGA---GC-------AC
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           7924 15 -      8775 C-C-T--------------------A----ACTT-CAG---GC-------AT
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Ochotona_princeps.JH802095.1                            4996729 2205 -  23139505 I
e Perognathus_longimembris.PerPac_flattened_line_19359        892 695 +     49596 I
e Dipodomys_ordii.KN672545.1                              3657363 894 +   4240102 I
e Procavia_capensis.ProCapCap_scaffold_149274                2467 1156 -      9567 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Megaderma_lyra.MegLyr_scaffold_3562                       64783 239 -    234502 I
e Heterohyrax_brucei.HetBruBak_scaffold_25354               61360 1157 +     73687 I
e Echinops_telfairi.JH980316.1                           22999931  2 -  44670279 I
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1008 325 -      5782 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19677 266 -    119109 I
e Tarsius_wallacei.k141_48636                               60532 3805 +     65473 I
e Tarsius_lariang.k141_609102                               27216 3812 +     42269 I
e Rattus_norvegicus.chr11                                13915860 1475 +  90463843 I
e Psammomys_obesus.NESX01026517.1                           36530 59 +     77221 I
e Peromyscus_maniculatus.KI615518.1                       4951275  0 -   8017169 C
e Mus_spretus.CM004110.1                                 74333573 2703 +  97876770 I
e Mus_pahari.LT608305.1                                  67557037 2889 +  89017189 I
e Mus_musculus.chr16                                     75490838 2711 +  98207768 I
e Mus_caroli.LT608236.1                                  70767758 3738 +  92629107 I
e Dolichotis_patagonum.DolPat_scaffold_14102                36772 276 -     73477 I
e Dasyprocta_punctata.DasPun_flattened_line_634             59553 276 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                18462 277 +     26546 I
e Ctenodactylus_gundi.CteGun_scaffold_447                  209424  0 -    956709 C
e Cephalopachus_bancanus.k141_702587                         8788 3391 +     21754 I
e Cavia_tschudii.CavTsc_scaffold_488                       177453 271 +    436027 I
e Cavia_porcellus.DS562889.1                             15799262 290 -  24440124 I
e Cavia_aperea.AVPZ01000278.1                            15787326 288 -  24422027 I
e Carlito_syrichta.NW_007248099.1                          309764 3411 +    345090 I
e Pan_paniscus.CM003386.1                               127575888 480 - 205426864 I
e Pan_troglodytes.CM009241.2                            120153042 480 - 196562556 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               15004 67 +    209709 C-----T-GG-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCTACCAA--CTCATAT-G--GA-TT-GGTAATGATCT-GATAGAAGA
s Acinonyx_jubatus.LLWD01000356.1                         2035017 62 +   3721120 C-----T-GG-GAAAG--CTATC-AG-TT---C-T-CT--TGTCCCTTCCCG---CTCATAT-A--GA-TT-TATAATT-----GCTATATGA
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    114867 65 -    189883 C-----T-AG-AAAAG--TTCT-GAG-TT---T-T-CT--CCATTCTTCCTA---ATTGTGC-G--CA-TG-CACAGTAA-AT-GACAGACGA
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10658580 66 +  23371972 C-----T-GG-GAAAA--CTCTG-GG-TT---C-T-CT--CCACTCTTCCCA---CTCATAC-A--GA-TT-TGTAATTGTCT-CTTATCTGA
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7095714 66 -  16596857 C-----T-GG-GAAAA--GTCTG-GG-TT---C-T-GT--CCACCCTTCCCA---CTCATAT-A--GA-TT-TGAAATTGTCT-GTGATCTGT
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   18374 62 -     22067 C-----T-AG-GGAAG--CTCTG-GG-TT---C-T-GT--CCAATTTTCCTA---TTCATAT-G--TA-TT-GGAAATAA-----ATAAAAGA
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   2731 67 -     60446 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCTCCCAA--ATCATGT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         3448 67 -     29318 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCTCCCAA--ATCATGT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         2384 67 +     38766 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCTCCCAA--ATCATGT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          3342 67 -     80423 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCTCCCAA--ATCATGT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            11329 67 -     18050 C-----T-GG-TTAAG--TTTTG-GA-TT---T-T-CT--CCTGTCCTCCCAA--GTCATAT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_1710068                               1045 67 +      1555 C-----T-GG-TTAAG--TTTTG-GA-TT---T-T-CT--CCTGTCCTCCCAA--GTCATTT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Alouatta_caraya.k141_1710068                          C 0 C 0
s Alouatta_discolor.k141_811576                             12002 67 -     21359 C-----T-GG-TTAAG--TTTTG-GA-TT---T-T-CT--CCTGTCCTCCCAA--GTCATAT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                1625 67 +      2129 C-----T-GG-TTAAG--TTTTG-GA-TT---T-T-CT--CCTGTCCTCCCAA--GTCATTT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_2177643                          1002 67 -      1868 C-----T-GG-TTAAG--TTTTG-GA-TT---T-T-CT--CCTGTCCTCCCAA--GTCATAT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Alouatta_macconnelli.k141_2177643                     C 0 C 0
s Alouatta_nigerrima.k141_3537692                            1051 67 +      1660 C-----T-GG-TTAAG--TTTTG-GA-TT---T-T-CT--CCTGTCCTCCCAA--GTCATTT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Alouatta_nigerrima.k141_3537692                       C 0 C 0
s Alouatta_palliata.k141_2764429                              971 67 -      1480 C-----T-GG-TTAAG--TTTTG-GA-TT---T-T-CT--CCTGTCCTCCCAA--GTCATAT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Alouatta_palliata.k141_2764429                        C 0 C 0
s Alouatta_puruensis.k141_131505                              258 67 +      4855 C-----T-GG-TTAAG--TTTTG-GA-TT---T-T-CT--CCTGTCCTCCCAA--GTCATTT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Alouatta_puruensis.k141_131505                        C 0 C 0
s Alouatta_seniculus.k141_1531728                            1186 67 -      1692 C-----T-GG-TTAAG--TTTTG-GA-TT---T-T-CT--CCTGTCCTCCCAA--GTCATTT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Alouatta_seniculus.k141_1531728                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3521153 66 +   4113121 T-----T-GA-GAAAG--TTCTG-GG-TT---C-T-TT--CCACTCTTCCCA---CTGTTAC-A--GA-GT-GGAAATGATCA-GGTAGCGGA
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      391557 25 -    631301 C-----T-GG-GAAAG--TTCTA-GG-TT---T-T-CT--CCA--------------------------------------------------
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 I 10
s Antilocapra_americana.AntAmePen_scaffold_42841            31738 66 +     33004 C-----T-GA-GAAAG--TTCTG-GG-TC---C-T-TT--CCACTCTTCTCA---TTGTTAT-A--GA-GT-GGAAATGATCA-GGTAGCAGA
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 63675 66 +     78111 C-----T-GG-TTAAG--TTTTG-GA--T---T-T-CT--CCTATCCTCCCAA--GTCATAT-G--GA-TT-GCTAATGATCG-GATAGAAGA
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            6618 66 +     22701 C-----T-GG-TTAAG--TTTTG-GA--T---T-T-CT--TCTGTCCTCCCAA--GTCATAT-G--GA-TT-GCTAAGGATCG-GATAGAAGA
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5750575 66 +   9889416 C-----T-GG-TTAAG--TTTTG-GA--T---T-T-CT--CCTGTCCTCCCAA--GTCATAT-G--GA-TT-GCTAATGATCG-GATAGAAGA
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             7164 66 -    104377 C-----T-GG-TTAAG--TTTTG-GA--T---T-T-CT--CCTGTCCTCCCAA--GTCATAT-G--GA-TT-GCTAATGATCG-GATAGAAGA
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               7166 66 +     23246 C-----T-GG-TTAAG--TTTTG-GA--T---T-T-CT--CCTGTCCTCCCAA--GTCATAT-G--GA-TT-GCTAATGATCG-GATAGAAGA
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_231055                     1073 38 -      2492 ----------------------------------------CTGATTTTCCCA------ATAC-G--TA-TT-GGAAA---TAT-GTTACCAGG
i Aplodontia_rufa.AprRuf_scaffold_231055                I 18 C 0
s Arctocebus_calabarensis.k141_587554                        1962 67 +      9265 C-----T-CA-AAAAG--TTCTG-TT-TT---TTT-CT--CCATTCTTCTCA---CTCTTAC-G--GA-TC-GGAAAAGACCT-GATAGCAGA
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                 9974 25 -     29036 C-----T-GG-GAAAG--TTCTG-GG-TT---C-T-CT--CCA--------------------------------------------------
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 I 10
s Ateles_geoffroyi_b.tarseq_2582                             9540440 65 +  39197703 C-----T-GG-TTAAG--TTTTG-GA-TT---C-T-CT--CCTGTCCTCCC----GTCATAT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             61711 67 +     85812 C-----T-GG-TTAAG--TTTTG-GA-TT---T-T-CT--CCTGTCCTCCC--AAGTCATAT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                12724 67 +     89302 C-----T-GG-TTAAG--TTTTG-GA-TT---T-T-CT--CCTGTCCTCCC--AAGTCATAT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             17227 65 -     58268 C-----T-GG-TTAAG--TTTTG-GA-TT---C-T-CT--CCTGTCCTCCC----GTCATAT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             65219 67 +    119057 C-----T-GG-TTAAG--TTTTG-GA-TT---T-T-CT--CCTGTCCTCCC--AAGTCATAT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               7190 65 -     25888 C-----T-GG-TTAAG--TTTTG-GA-TT---C-T-CT--CCCGTCCTCCC----GTCATAT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 7716 46 -     16375 ------------------------------------CT--CCACTCCTCTTA---CTCATAT-A--GA-TT-AGAAATTTCCT-GATAGCAGA
i Avahi_laniger.k141_2840928                            I 19 C 0
s Avahi_peyrierasi.k141_798820                               1332 46 +      6337 ------------------------------------CT--CCACTCCTCTTA---CTCATAT-A--GA-TT-AGAAATTTCCT-GATAGCAGA
i Avahi_peyrierasi.k141_798820                          I 19 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26381216 68 +  51448160 C-----T-GG-GAAAG--TTCTG-gg-tt---c-c-ctccccacccttccca---ctGTTAT-A--GA-TT-GGAAATGATCA-GGTAGCAGA
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        6388 68 -     13118 C-----T-GG-GAAAG--TTCTG-gg-tt---c-c-ctccccacccttccca---ctGTTAT-A--GA-TT-GGAAATGATCA-GGTAGCAGA
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   44259 66 -     72089 T-----T-GA-GAAAG--TTCTG-GG-TT---C-T-TT--CCACTCTTCCCA---CTGTTAT-A--GA-GT-GGAAATGATCA-GGTAGCAGA
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6560886 66 +   6870073 T-----T-GA-GAAAG--TTCTG-GG-TT---C-T-TT--CCACTCTTCCCA---CTGTTAT-A--GA-GT-GGAAACGATCA-GGGAGCAGA
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138141001 66 - 161108492 T-----T-GA-GAAAG--TTCTG-GG-TT---C-T-TT--CCACTCTTCCCA---CTGTTAT-A--GA-GT-GGAAATGATCA-GGGAGCAGA
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     573538 66 -    998990 T-----T-GA-GAAAG--TTCTG-GG-TT---C-T-TT--CCACTCTTCCCA---CTGTTAT-A--GA-GT-GGAAATGATCA-GGGAGCAGA
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136296734 66 - 158972876 T-----T-GA-GAAAG--TTCTG-GG-TT---C-T-TT--CCACTCTTCCCA---CTGTTAT-A--GA-GT-GGAAATGATCA-GGGAGCAGA
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1233815 66 -   1914593 T-----T-GA-GAAAG--TTCTG-GG-TT---C-T-TT--CCACTCTTCCCA---CTGATAT-A--GA-GT-AGAAATGATCA-GGTAGCAGA
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               115077 67 -    171031 C-----T-GG-CTAAG--TTTTG-GA-TT---T-T-CT--CTTGTCCTCCCAA--GTCATAT-G--GA-TT-GGTAATGAACT-GATAGAAGA
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 14106 67 +    125063 C-----T-GG-CTAAG--TTTTG-GA-TT---T-T-CT--CTTGTCCTCCCAA--GTCATAT-G--GA-TT-GGTAATGAACT-GATAGAAGA
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                16149 67 -    216513 C-----T-GG-CTAAG--TTTTG-GA-TT---T-T-CT--CTTGTCCTCCCAA--GTCATAT-G--GA-TT-GGTAATGAACT-GATAGAAGA
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        8692 67 -    134917 C-----T-GG-CTAAG--TTTTG-GA-TT---T-T-CT--CTTGTCCTCCCAA--GTCATAT-G--GA-TT-GGTAATGAACT-GATAGAAGA
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3220563 65 -   8989139 C-----T-AG-GAAAG--CTCTG-GG-TT---C-T-CT--CCACCCTTCCCA---CTGTCAC-A--GA-GT-GGAAGTGATCA-GGGAGCAG-
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           398264 65 -  15254737 C-----T-AG-GAAAG--CTCTG-GG-TT---C-T-CT--CCACCCTTCCCA---CTGTCAC-A--GA-GT-GGAAGTGATCA-GGGAGCAG-
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2974000 65 +   6889770 C-----T-AG-GAAAG--CTCTG-GG-TT---C-T-CT--CCACCCTTCCCA---CTGTCAC-A--GA-GT-GGAAGTGATCA-GGGAGCAG-
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11520730 67 +  39901454 C-----T-GG-AAAAA--TTCTG-G--TT---C-T-CT--CCACTCTTCCCA---CTCATAT-ATAGA-TT-TGTAACCATCT-GCTATCTGA
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   15755 67 +     87036 C-----T-GG-AAAAA--TTCTG-G--TT---C-T-CT--CCACTCTTCCCA---CTCATAT-ATAGA-TT-TGTAACCATCT-GCTATCTGA
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11267399 67 -  35597290 C-----T-GG-AAAAA--TTCTG-G--TT---C-T-CT--CCACTCTTCCCA---CTCATAT-ATAGA-TT-TGTAACCATCT-GCTATCTGA
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11089932 67 +  39895921 C-----T-GG-AAAAA--TTCTG-G--TT---C-T-CT--CCACTCTTCCCA---CTCATAT-ATAGA-TT-TGTAACCATCT-GCTATCTGA
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16456945 67 -  44759192 C-----T-GG-AAAAA--TTCTG-G--TT---C-T-CT--CCACTCTTCCCA---CTCATAT-ATAGA-TT-TGTAACCATCT-GCTATCTGA
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21326224 66 + 157394656 T-----T-GA-GAAAG--TTCTG-GG-TT---C-T-TT--CCACTCTTCCCA---CTGTTAC-A--GA-GT-GGAAATGATCA-GGTAGCGGA
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135707452 66 - 157403528 T-----T-GA-GAAAG--TTCTG-GG-TT---C-T-TT--CCACTCTTCCCA---CTGTTAC-A--GA-GT-GGAAATGATCA-GGTAGCGGA
i Capra_hircus.CM004562.1                               C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               60764 25 +     67245 C-----T-GG-GAAAG--TTCTG-GG-TT---C-T-CT--CCC--------------------------------------------------
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 I 10
s Castor_canadensis.CasCan_scaffold_47037                   32144 47 +     33760 ----------------------------------T-TT--CAACTTTTCCCA---CTCACAC-A--TA-AG-GGAAATAATCT-AATAGCAGT
i Castor_canadensis.CasCan_scaffold_47037               I 15 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   159888 60 -    276539 ------------AAAG--CTCTG--C-TT---C-T-CT--CCACCCCTCTCC---CTATCAT-A--GG-TT-AGAAGTGATCA-GGTGGCAGA
i Catagonus_wagneri.CatWag_scaffold_1305                I 1 C 0
s Cebus_albifrons.Contig22                               18891912 67 -  29618158 C-----T-GG-TTAAG--TTTTG-GA-TT---T-T-CT--CCTGTCCTTCCAA--GTCATAT-G--GA-TT-GTTAATGATCT-GACAGAAGA
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 9456 67 -     26817 C-----T-GG-TTAAG--TTTTG-GA-TT---T-T-CT--CCTGTCCTCCCAA--GTCATAT-G--GA-TT-GTTAATGATCT-GACAGAAGA
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                13699 67 +     25043 C-----T-GG-TTAAG--TTTTG-GA-TT---T-T-CT--CCTGTCCTCCCAA--GTCATAT-G--GA-TT-GTTAATGATCT-GACAGAAGA
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4364933 66 +   7569818 C-----T-GG-GAAAG--CTCTG-GG-TT---T-T-GT--CCACTCCTGCCA---CTCATAT-A--GA-TT-GGAAATGATCA-GGTAGCCGA
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         4690 66 -      9338 C-----T-GG-GAAAG--CTCTG-GG-TT---T-T-GT--CCACTCCTGCCA---CTCATAT-A--GA-TT-GGAAATGATCA-GGTAGCCGA
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6556678 67 +   6739814 C-----T-GA-TTAAG--TTTTG-gg-tt---t-t-ct--cccttcctcccaa--aTCATGT-G--GA-TT-AGTAATGATCT-GATAGAAGA
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      28152 67 +     60454 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCTCCCAA--ATCATGT-G--GA-TT-AGTAATGATCT-GATAGAAGA
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          3359 67 -     21101 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCTCCCAA--ATCATGT-G--GA-TT-AGTAATGATCT-GATAGAAGA
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         60669 67 -    107033 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCTCCCAA--ATCATGT-G--GA-TT-AGTAATGATCT-GATAGAAGA
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        3548 67 -     17608 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCTCCCAA--ATCATGT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                           707 67 +     45019 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCTCCCAA--ATCATGT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                            791 67 +     15177 C-----T-GA-TTAAG--TTTTA-GG-TT---T-T-CT--CCCTTCCTCCCAA--ATCACGT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          3591 67 +     16677 C-----T-GA-TTAAG--TTTTA-GG-TT---T-T-CT--CCCTTCCTCCCAA--ATCATGT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           25761 67 +     35983 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCTCCCAA--ATCATGT-G--GA-TT-GGTAATGATCA-GATAGAAGA
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11992289 67 +  12117833 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCTCCCAA--ATCATGT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46479047 67 +  46592721 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCTCCCAA--ATCATGT-G--GA-TT-GGTAATGATCA-GATAGAAGA
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      42601 67 -     45581 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCTCCCAA--ATCATGT-G--GA-TT-GGTAATGATCA-GATAGAAGA
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       3603 67 +     35577 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCTCCCAA--ATCATGT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        3376 67 -     25661 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCTCCCAA--ATCATGT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        3355 67 -     17744 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCTCCCAA--ATCATGT-G--GA-TT-GGTAATGATCA-GATAGAAGA
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        22961 67 +     37128 C-----T-GA-TTAAG--TTTTA-GG-TT---T-T-CT--CCCTTCCTCCCAA--ATCATGT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           3799 47 -      6963 ----------------------------------T-CC--ACCCTCCTTGCA---TTTATAT-A--GA-TT-GGGAGAGATCT-GATAGCAGA
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      I 14 C 0
s Cheirogaleus_major.k141_1157592                           59987 46 -     68416 ------------------------------------CT--CTACTCCTATCA---CTCATAT-A--TA-TT-AGAAATGACCT-GATAGCAGA
i Cheirogaleus_major.k141_1157592                       I 19 C 0
s Cheirogaleus_medius.k141_133808                            9039 46 +     13308 ------------------------------------CT--CTACTTCTATCA---CTCATAT-A--TC-TT-AGAAATGACCT-AATAGCAGA
i Cheirogaleus_medius.k141_133808                       I 19 C 0
s Cheracebus_lucifer.k141_619653                             6734 67 -     18223 C-----T-GG-CTAAG--TTTTG-GA-TT---T-T-CT--CCTGTCCTCCTAA--GTCATAT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             23752 67 +     25473 C-----T-GG-CTAAG--TTTTG-GA-TT---T-T-CT--CCTGTCCTCCTAA--GTCATAT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           42792 67 +     57117 C-----T-GG-CTAAG--TTTTG-GA-TT---T-T-CT--CCTGTCCTCCTAA--GTCATAT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          47471 67 +     54541 C-----T-GG-CTAAG--TTTTG-GA-TT---T-T-CT--CCTGTCCTCCTAA--GTCATAT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15962753 53 +  43084221 -------------------------G-TT---A-T-TT--CCACTCTTCCCA---TTCCCAT-A--CATATCAGAAATAATGT-GATAGCAGA
i Chinchilla_lanigera.JH721867.1                        I 15 C 0
s Chiropotes_israelita.k141_1189915                         72278 67 +    196370 C-----T-GG-CTAAG--TTTTG-GA--T---T-TTCT--CTTGTCCTCCCAA--GTCATAT-A--GA-TT-GGTAATGATCT-GATAGAAGA
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          16458 67 +     40510 C-----T-GG-CTAAG--TTTTG-GA--T---T-TTCT--CTTGTCCTCCCAA--GTCATAT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15140958 67 -  15256731 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCTCCCAA--ATCATGT-G--GA-TT-GGTAATGATCT-GATAGAACA
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      35567 67 -     53260 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCTCCCAA--ATCATGT-G--GA-CT-GGTAATGATCT-GATAGAAGA
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101146126 67 + 101219884 C-----T-GA-TTAAG--TTTTG-gg-tt---t-t-ct--cccttcctcccaa--aTCATGT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                17534 66 -     21363 C-----T-AT-AGAAG--CTATA-GC-TT---C-T-CT--CCACTCCTCCCA---CTCATAT-A--GA-TT-GGGAGTTATCT-GATAGCAGA
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           762839 66 +    964067 C-----T-AT-AGAAG--CTATA-GC-TT---C-T-CT--CCACTCCTCCCG---CCAATAC-A--GA-TT-GGGAGTTATCT-GATAGCAGA
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10888118 67 +  10971483 C-----T-GA-TTAAG--TTTTG-gg-tt---t-t-ct--cccttcctcccaa--aTCATGT-G--GA-CT-GGTAATGATCT-GATAGAAGA
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147666046 67 + 156195979 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCTCCCAA--ATCATGT-G--GA-CT-GGTAATGATCT-GATAGAAGA
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            18029 67 +     23629 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCTCCCAA--ATCATGT-A--GA-CT-GGTAATGATCT-GATAGAGGA
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60620618 42 +  78930452 ------------------------------------------cttcctttca---ctGACA-TA--GA-TT-AGAAATGATCC-AATAGCAGC
i Condylura_cristata.JH655880.1                         I 22 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 279392 64 -    399297 C-----T-AA-GAAAG--TTGTG-AG-TT---T-T-CT--CCTGTCTTCTTA---ATAATAT-G--CA-TT-TTGAATAAAAG-TATAGCT--
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53030314 66 +  72327488 C-----T-AG-GAAAG--TTCTG-AG-TT---T-T-CT--CCACTCTTCCTA---ATTGTAT-A--CA-TT-CAGAATAAAAT-GATAGAAAa
i Cricetulus_griseus.LT883672.1                         C 0 I 1196
s Crocidura_indochinensis.CroInd_scaffold_848148              589 44 +      1327 -------------------------------------T--TCACTC-TTTCA---GTGATA-TA--AA-TT-GGGAATGATCA-GATATCAGA
i Crocidura_indochinensis.CroInd_scaffold_848148        I 18 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            53069 66 -     70449 C-----T-GG-GAAAG--CTACC-GG-TT---C-T-CT--CCACCCTTCCCA---CTCATAT-A--GA-TT-TGTAATTATCT-GCTATCTGA
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  209424 41 -    956709 ------------gaag--tctt--tg-tttttc-c-cc--ccactattttta---ttaatac-a--ca-------------------------
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 I 14
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 32109 53 -     67205 -------------------------T-TT---G-T-TT--CCACTATTCCCA---TCCACCC-A--TGTATCAGAAATAATGT-GGTAGCCAG
i Ctenomys_sociabilis.CteSoc_scaffold_19489             I 15 C 0
s Dasypus_novemcinctus.JH568778.1                          184647 47 -   6883506 ----------------------------------T-CC--GTACTCCTTGCA---TTTATAT-A--CA-TT-GGGAGAAATCT-GACAGCAGA
i Dasypus_novemcinctus.JH568778.1                       I 14 C 0
s Daubentonia_madagascariensis.ctg11                     16845832 66 +  31942871 C-----T-CA-AAAAG--TTCTG-GG-TT---T-T-CT--CCACTCCCCTCA---CTCATAT-A--GA-TT-GGCAATGACCT-GATATCAGA
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80037844 68 -  96802777 C-----G-GG-GAAAG--TTCTG-GG-GT---C-C-TTCCCCACCCTTCCCA---CTGTTAT-A--GA-TT-GGAAATGATCA-GGTAGCAGA
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18700052 25 -  18957592 C-----T-GG-GAAAG--TTCTG-GG-TT---C-T-CT--CCA--------------------------------------------------
i Desmodus_rotundus.KZ672188.1                          C 0 I 10
s Dicerorhinus_sumatrensis.PEKH010003161.1                 323585 66 +    993696 C-----T-GG-GAAAG--CTCTG-GG-TT---C-T-GT--CCACTCCTGCCA---CTCATAT-A--GA-TT-GGAAATGATCA-GGTAGTCGA
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   4237 66 +    151128 C-----T-GG-GAAAG--CTCTG-GG-TT---C-T-GT--CCACTCCTGCCA---CTCATAT-A--GA-TT-GGAAATGATCA-GGTAGCCGA
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   157952 53 +    228994 -------------------------G-TT---A-G-TT--CCACTTTTCCCA---TTCACAT-A--CATATCAGAAATAATGT-GATCACAGA
i Dinomys_branickii.DinBra_scaffold_1996                I 15 C 0
s Eidolon_helvum.KE772537.1                                 13294 66 +     24177 C-----T-AG-GAAAG--CTTCC-ta-tt---c-t-ct--ccccttctccca---ctAATAG-T--GA-TG-AGAAATGATCA-GATAGCAGA
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1492505 46 +   1727528 ------------------------------------TT--CCACTCTTCCCA---CTGTTAT-A--GA-GT-AGAAATGATCA-GGTAGCAGA
i Elaphurus_davidianus.JRFZ01086400.1                   I 8 C 0
s Elephantulus_edwardii.JH947210.1                        7829755 43 +  15467074 --------------------------------t-t-ct--ccattcctttga---CACATAC-T--AA-CT-GGGAATG------ATAACAGA
i Elephantulus_edwardii.JH947210.1                      I 13 C 0
s Ellobius_lutescens.LOEQ01003611.1                        240483 66 -    369425 C-----T-AG-GAAAT--TTCTG-AG-TT---T-T-CC--CTACTTTTCCTA---ATTGCAT-G--CA-TT-CAGGATACAAT-GATAGAATA
i Ellobius_lutescens.LOEQ01003611.1                     I 2 C 0
s Ellobius_talpinus.LOJH01090055.1                           7653 66 -      7838 C-----T-AG-GAAAG--TTCTG-AG-TT---T-T-CC--CTACTTTTCCTA---ATTGTAT-G--CA-TT-TGGGATACAAA-GATAGAATA
i Ellobius_talpinus.LOJH01090055.1                      I 2 C 0
s Eptesicus_fuscus.JH977687.1                             4707984 66 +   6522550 C-----T-GG-GAAAC--CTCTG-GG-TT---T-T-CT--CCACTTCTCCCA---CTGATAG-A--GA-TA-GGAATTGATCA-GGTAGCAGG
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5854223 66 -   7175178 C-----T-GG-GAAAA--CTCTG-GG-TT---C-T-CT--CCACTCCTCCCA---CTCGTAT-A--GA-CT-GGAAATGATCA-GATGGCCGA
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13352723 66 +  41866177 C-----T-GG-GAAAA--CTCTG-GG-TT---C-T-CT--CCACTCCTCCCA---CTCGTAT-A--GA-CT-GGAAATGATCA-GATGGCCGA
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          14213 66 +     92910 C-----T-GG-GAAAA--CTCTG-GG-TT---C-T-CT--CCACTCCTCCCA---CTCGTAT-A--GA-CT-GGAAATGATCA-GATGGCCGA
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erythrocebus_patas.Contig8                             48778137 67 -  48907691 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCTCCCAA--ATCATGT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          316056 68 +    330699 C-----T-GG-GAAAG--TTCTG-GG-TT---C-C-CTCCCCACCCTTCCCA---CTGTTAC-A--GA-CT-GGAAATGATCA-GGTAGCAGA
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             62512 68 +     89355 C-----T-GG-GAAAG--TTCTG-GG-TT---C-C-CTCCCCACCCTTCCCA---CTGTTAT-A--GA-TT-GGAAATGATCA-GGTAGCAGA
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              6026 46 +     13586 ------------------------------------CT--CCACTCCTCTCA---CTCAGAT-A--GA-TT-AGAAAAGACCT-GACAGAAGA
i Eulemur_albifrons.k141_715837                         I 19 C 0
s Eulemur_collaris.k141_311830                               5958 46 -      6809 ------------------------------------CT--CCACTCCTCTCA---CTCAGAT-A--GA-TT-AGAAAAGACCT-GACAGAAGA
i Eulemur_collaris.k141_311830                          I 19 C 0
s Eulemur_coronatus.k141_3240342                            12432 46 +     36558 ------------------------------------CT--CCACTCCTCTCA---CTCAGAT-A--GA-TT-AGAAAAGACCT-GACAGAAGA
i Eulemur_coronatus.k141_3240342                        I 19 C 0
s Eulemur_flavifrons.k141_903901                             8771 24 +     60246 ------------------------------------------------------------------GA-TT-AGAAAAGACCT-GACAGAAGA
i Eulemur_flavifrons.k141_903901                        I 37 C 0
s Eulemur_fulvus.k141_653297                                12231 46 +    109717 ------------------------------------CT--CCACTCCTCTCA---CTCATAT-A--GA-TT-AGAAAAGACCT-GACAGAAGA
i Eulemur_fulvus.k141_653297                            I 19 C 0
s Eulemur_macaco.k141_747087                                  216 46 -     19505 ------------------------------------CT--CCACTCCTCTCA---CTCAGAT-A--GA-TT-AGAAAAGACCT-GACAGAAGA
i Eulemur_macaco.k141_747087                            I 19 C 0
s Eulemur_mongoz.k141_825972                                16891 46 +     27497 ------------------------------------CT--CCACTCCTCTCA---CTCATAT-A--GA-TT-AGAAAAGACCT-GACAGAAGA
i Eulemur_mongoz.k141_825972                            I 19 C 0
s Eulemur_rubriventer.k141_411740                           19347 46 +     26808 ------------------------------------CT--CCACTCCTCTCA---CTCAGAT-A--GA-TT-AGAAAAGACCT-GACAGAAGA
i Eulemur_rubriventer.k141_411740                       I 19 C 0
s Eulemur_rufus.k141_1620292                                34085 46 +     46535 ------------------------------------CT--CCACTCCTCTCA---CTCATAT-A--GA-TT-AGAAAAGACCT-GACAGAAGA
i Eulemur_rufus.k141_1620292                            I 19 C 0
s Eulemur_sanfordi.k141_186399                              16811 46 -     29447 ------------------------------------CT--CCACTCCTCTCA---CTCAGAT-A--GA-TT-AGAAAAGACCT-GACAGAAGA
i Eulemur_sanfordi.k141_186399                          I 19 C 0
s Felis_catus.CM001386.2                                129893989 62 - 159252932 C-----T-GG-GAAAG--CTATC-AG-TT---C-T-CT--TGTCCCTTCCCG---CTCATAT-A--GA-TT-TATAATT-----GCTATATGA
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129281073 62 - 158578461 C-----T-GG-GAAAG--CTATC-AG-TT---C-T-CT--TGTCCCTTCCCG---CTCATAT-A--GA-TT-TATAATT-----GCTATATGA
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 22213 62 +     52776 C-----t-gg-gaaag--ctatc-ag-tt---c-t-ct--tgtcccttccca---ctcatat-a--ga-tt-tataatt-----gctatatga
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13892418 53 -  19261668 -------------------------GATT---A-T-TT--CCACTCTTCCTA---TTCatac-a--aat-ttagaaataatgt-aAAAGCAGA
i Fukomys_damarensis.KN123630.1                         I 12 C 0
s Galago_moholi.ctg555                                     211869 66 -    847004 C-----T-CA-AAAAG--TTCTG-GT-TT---T-T-CT--CCATTCCTCTCA---CTGACGT-G--GA-TT-GGAAATGACCT-GATGGCAGA
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           14243 63 -     43889 C-----T-CA-AAAAG--TTCTG-GT-TT---T-T-CT--CCATTTCTCTCA---CTGACGT-G--GA-TT-GGAAAC---CT-GATGGCAGA
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          11309 66 +     27357 C-----T-CA-AAAAG--TTCTG-GT-TT---T-T-CT--CCATGCCTCTCT---CTCATGT-G--GA-TT-GGAGACAACCT-GATGGCAGA
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               157335 66 +    324696 C-----T-GG-GAAAG--CTCTG-GG-TT---C-T-CG--TCAGTTCTCCCA---CTCAGGC-A--GA-TT-GGAAATGATCT-GATAATAGA
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    182278 66 -    189561 C-----T-GA-GAAAG--TTCTG-GG-TT---C-T-TT--CCACTCTTCCCA---CTGTTAC-A--GA-GT-GGAAATGATCA-GGTAGCAGA
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           14803 66 -     18683 C-----T-AG-GAAAG--TTATG-GG-TT---C-C-CT--CCACTCTTCCCA---TTCATAC-A--TA-TT-GGAAATAATAT-AATAGCTCC
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               6718 67 -     14630 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCTCCCAA--CTCATAT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119653818 67 - 195582420 C-----T-GA-TTAAG--TTTTg-gg-tt---t-t-ct--cccttcctcccaa--cTCATAT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   78217 66 +    118900 T-----T-AG-GTAAG--TTCTG-GG-TT---C-T-CT--CTACTCTTCCCA---TTTATAC-A--TA-TT-AGAAATAATAT-GATAGCACC
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         2816 46 +     10286 ------------------------------------CT--CCACTCCTCTCA---CTCATAT-A--GA-TT-AGAAAAGACCT-GGCAGAAGA
i Hapalemur_alaotrensis.k141_1280836                    I 19 C 0
s Hapalemur_gilberti.k141_279011                             1296 46 -     11661 ------------------------------------CT--CCACTCCTCTCA---CTCATAT-A--GA-TT-AGAAAAGACCT-GGCAGAAAA
i Hapalemur_gilberti.k141_279011                        I 19 C 0
s Hapalemur_griseus.k141_1387522                             6622 46 +     56096 ------------------------------------CT--CCACTCCTCTCA---CTCATAT-A--GA-TT-AGAAAAGACCT-GGCAGAAGA
i Hapalemur_griseus.k141_1387522                        I 19 C 0
s Hapalemur_meridionalis.k141_186231                        29871 46 -     42470 ------------------------------------CT--CCACTCCTCTCA---CTCATAT-A--GA-TT-AGAAAAGACCT-GGCAGAAGA
i Hapalemur_meridionalis.k141_186231                    I 19 C 0
s Hapalemur_occidentalis.k141_797938                        46499 46 -     54384 ------------------------------------CT--CCACTCCTCTCA---CTCATAT-A--GA-TT-AGAAAAGACCT-GGCAGAAGA
i Hapalemur_occidentalis.k141_797938                    I 19 C 0
s Helogale_parvula.HelPar_flattened_line_22962              18264 66 +     53719 C-----T-GG-GAAAG--CTATC-AG-TT---C-T-CT--CCACCCTGCCCA---CTCATAT-A--GA-TT-TGTAATTATCT-GCTATCTGA
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                28513 66 -     91191 T-----T-GA-GAAAG--TTCTG-GG-TT---C-T-TT--CCACTCTTCCCA---CTGTTAC-A--GA-GT-GGAAATGATCA-GGTAGCGGA
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2552134 52 +  31725842 ---------------------------TT---A-T-TT--CCATTCTTCCTA---TTCATAC-A--AATGTCAGAAATAATGT-GAAAGCAAA
i Heterocephalus_glaber.JH602058.1                      I 5 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              148139 66 +    277961 C-----T-GG-GAAAG--CTCTG-GG-TT---C-T-CT--CCACCCTTTCCA---CTGTTAT-A--GA-CT-GGAAATGATCA-GATAGCAGA
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      279454 39 -    477199 -----------------------------------------CATGTCCCCCA---CTGA--G-A--GA-TT-GGAAATGATCA-G--AGTAGA
i Hipposideros_armiger.JXIK01001085.1                   I 7 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              8603 39 -      9143 -----------------------------------------CATGTCCCCCA---CTGA--G-A--GA-TT-GGAAATGATCA-G--AGCAGA
i Hipposideros_galeritus.HipGal_scaffold_104691         I 7 I 107
s Hoolock_leuconedys.ctg649                                   105200 67 +    115816 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCTCCCAA--CTCATAT-T--GA-TT-GGTAATGATCT-GATAGAAGA
i Hoolock_leuconedys.ctg649                                I 188 I 28
s Hyaena_hyaena.HyaHya_flattened_line_20729                 18335 66 -     67322 C-----T-GG-GAAAG--CTATC-AG-TT---C-T-CT--CCACCCTTCCCA---CTGGTAT-A--GA-TT-TCTAATTGTCT-GCTATCTGA
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hylobates_abbotti.k141_164775                              1191 67 -      2073 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCTCCCAA--CTCATAT-T--GA-TT-GGTAATGATCT-GATAGAAGA
i Hylobates_abbotti.k141_164775                         C 0 C 0
s Hylobates_agilis.k141_55853                                 776 67 -      1487 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCTCCCAA--CTCATAT-T--GA-TT-GGTAATGATCT-GATAGAAGA
i Hylobates_agilis.k141_55853                           I 23 I 187
s Hylobates_klossii.k141_285563                               925 67 +      1026 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCTCCCAA--CTCATAT-T--GA-TT-GGTAATGATCT-GATAGAAGA
i Hylobates_klossii.k141_285563                         I 150 I 11
s Hylobates_pileatus_b.ContigUN                                 14626096 67 -  25970782 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCTCCCAA--CTCATAT-T--GA-TT-GGTAATGATCT-GATAGAAGA
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_950183                              792 67 +      2027 C-----T-GA-TTAAG--TTTTG-GA-TT---T-T-CT--CCCTTCCTCCCAA--CTCATAT-T--GA-TT-GGTAATGATCT-GATAGAAGA
i Hylobates_muelleri.k141_950183                        C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             35256 67 -     60944 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCTCCCAA--CTCATAT-T--CA-TT-GGTAATGATCT-GATAGAAGA
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     7195 68 +     22540 C-----T-AG-AAAAA--CTCTG-GG-TT---A-T-TT--CCACTCTTCCCA---TTCATAC-A--TATATTAGAAATAATGT-GATAGTAGA
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7126877 64 +  13083262 C-----T-AG-AAATC---TTTG-GG-TT---T-T-CT--CTGCTCTTCCCA---T-TATAC-A--TA-TT-GGAAATAATAT-GTTAGGAGA
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_5141390                                   1349 46 -      3181 ------------------------------------CT--CCCCTCCTCTCA---CTCATAT-A--GA-TT-AGAAATGACCT-GATAGCAGA
i Indri_indri.k141_5141390                              I 19 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              10050 68 +     17520 C-----T-GG-GAAAG--TTCTG-GG-TT---T-C-CTCCCCACCCTTCCCA---CTGTTAT-A--GA-TT-GGAAATGATCA-GGTAGCAGA
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH727545.1                                 1986 66 -      4668 C-----C-AT-AGAAG--CTCTG-GC-TT---C-T-GT--CCATCTTTTCTG---TTCATAT-G--ta-tt-ggaaataaaat-aataaaaga
i Jaculus_jaculus.JH727545.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               24652 68 +     37189 A-----T-GG-GAAAG--TTCTG-GG-CT---C-C-CTCCCCACCCTTCCCA---CTGTTAC-A--GA-TT-GGAAATGATCA-GGTAGCAGA
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          51309 67 -    147782 C-----T-GG-TTAAG--TTTTG-GA-TT---T-T-CT--CCTGTCCTCCCAA--GTCATAT-G--GA-TT-GGTAATGATCT-GATGGAAGA
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    4654 66 +     26176 C-----T-GG-GAAAG--ATCTT-GG-TT---T-T-CT--TCACTTCTCCCA---TTGATAC-A--GA-TA-GTAATTGATCA-GATGGTAGG
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258408174 46 - 285822530 ------------------------------------CT--CCACTCCTCTCA---CTCATAT-A--GA-TT-AGAAAAGACCT-GGCAGAAGA
i Lemur_catta.scaffold_1                                I 19 C 0
s Lepilemur_ankaranensis.k141_884009                        24925 46 +     39228 ------------------------------------CT--CTACTCCTCTCA---CTCATAT-A--GA-TT-ACAAATGACTT-GATAGCAGA
i Lepilemur_ankaranensis.k141_884009                    I 19 C 0
s Lepilemur_dorsalis.k141_134267                            54311 46 +     63517 ------------------------------------CT--CTACTCCTCTCA---CTCATAT-A--GA-TT-ACAAATGACCT-GATAGCAGA
i Lepilemur_dorsalis.k141_134267                        I 19 C 0
s Lepilemur_ruficaudatus.k141_617879                        79573 46 +    116806 ------------------------------------CT--CCGCTCCTCTCA---CTCATAT-A--GA-TT-ACAAATGACCT-GATAGCAGA
i Lepilemur_ruficaudatus.k141_617879                    I 19 C 0
s Lepilemur_septentrionalis.k141_578524                     32564 46 -     33031 ------------------------------------CT--CTACTCCTCTCA---CTCATAT-A--GA-TT-ACAAATGACCT-GATAGCAGA
i Lepilemur_septentrionalis.k141_578524                 I 19 C 0
s Leptonychotes_weddellii.KB714749.1                      3087016 66 -   3498232 C-----T-GG-GAATA--CTCTG-GG-TT---C-T-CT--CTACCCTTCCCA---CTCATAT-A--GA-TT-TGTAATTGTCT-GCTATCTGA
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    14358 59 +     22452 C-----T-GT-GAAAG--CTCTG-GG-TT---C-T-GT--TCA---CTCCTG---TTTATGT-A--CA-TT-AGAAGAGACATAGACA-----
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            137006 68 +   3060487 C-----T-GG-GAAAG--TTCTG-gg-tt---c-c-ctccccacccttccca---ctGTTAT-A--GA-TT-GGAAATGATCA-GGTAGCAGA
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19249755 67 +  19376315 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCTCCCAA--ATCATGT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           11598 59 +     84689 C-----T-CA-AAAAG--TTCTG-GT-TT---T-T-CT--CCCTTCCTCTCA---CTATTAT-G--GA-TT-G-------TCT-GATGGCAGA
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3779347 59 +   6799190 C-----T-CA-AAAAG--TTCTG-GT-TT---T-T-CT--CCCTTCCTCTCA---CTATTAT-G--GA-TT-G-------TCT-GATGGCAGA
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20595850 66 -  62548349 A-----C-AG-AAAAG--TTCTA-GC-AT---C-T-CT--CCATTTCTTCCA---CTTATAT-A--GA-CT-GGGAGAGATCT-GATAGCAGA
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11089388 67 +  39895028 C-----T-GG-AAAAA--TTCTG-G--TT---C-T-CT--CCACTCTTCCCA---CTCATAT-ATAGA-TT-TATAACCATCT-GCTATCTGA
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             21512 67 +     74745 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCGCCCAA--ATCATAT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12707972 67 +  12821369 C-----T-GA-TTAAG--TTTTG-GG-CT---T-T-CT--CCCTTCCGCCCAA--ATCATAT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                 550 67 -     26467 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCGCCCAA--ATCATAT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           48417 67 +     63263 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCGCCCAA--ATCATAT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                  527 67 -     26361 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCGCCCAA--ATCATAT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 3704 67 -      7381 C-----T-GA-TTAAG--TTTTG-GT-TT---T-T-CT--CCCTTCTGCCCAA--ATCATAT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  46942 67 -     79256 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCGCCCAA--ATCATAT-G--GA-CT-GGTAATGATCT-GATAGAAGA
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196037044 67 + 196197964 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCGCCCAA--ATCATAT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11447210 67 +  11645122 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCGCCCAA--ATCATAT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   5896 67 -     46448 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCGCCCAA--ATCATAT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                3562 67 -     13212 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCGCCCAA--ATCATAT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 17239 67 -     55006 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCGCCCAA--ATCATAT-A--GA-TT-GGTAATGATCT-GATAGAAGA
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43842345 67 +  43892939 C-----T-GA-TTAAG--TTTTG-GT-TT---T-T-CT--CCCTTCCGCCCAA--ATCATAT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               18526 67 -     24607 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCGCCCAA--ATCATAT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               5893 67 -     27140 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCGCCCAA--ATCATAT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                702010 66 +    802869 C-----T-AG-GAAAG--CTTCC-TG-TT---C-T-CT--TCACTTCTCCCA---CTAATAG-A--GA-TT-AGAAATCACCA-GATAGCAGA
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43438927 67 -  43563597 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCTCCCAA--ATCATGT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4451741 67 -   4543643 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCTCCCAA--ATCATGT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            147092 66 +    252755 C-----T-GG-GAAAG--CTCTG-GG-TT---C-T-CC--CTACTGCTCCAA---CTCATGT-A--GA-TT-GGAAATGATCA-GATAACAGA
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             37235 66 +     58827 C-----T-GG-GAAAG--CTCTG-GG-TT---C-T-CC--CCACTGCTCCAA---CTCATGT-A--GC-TT-GGAAATGATCA-GATAACAGA
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36874797 52 +  64221397 C-----T-AG-AAATC---TTTG-GG-TT---T-T-CT--CTGCTCTTCCCA---t-tttaa-a--ta-tt-ggaaataa-------------
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             2054 66 -     87323 C-----T-GG-GAAAA--CTCTG-GG-TT---C-T-CT--CCACCCTTCCTA---CTCATGT-A--GA-TT-TGTAATTGTCT-GCTATGTGA
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               14409 64 +     15977 C-----A-AG-GAAAG--TTCT--AG-TT---T-T-CT--TCACTCTTCATA---ATTGTAT-G--CA-TA-CAGGATAA-AC-AATAGAAGG
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1048119 66 -  26018355 C-----A-AG-GAAAG--TTCCG-AG-TT---T-T-CT--CCACTCATCCTA---ATTCTGT-G--CA-TT-Cagtataaaat-gacagaaaa
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_1172853                   153 68 +       347 C-----T-GG-GAAAG--TTCTG-GG-TT---C-C-CTCCCCACCCTTCCCA---CTGTTAT-A--GA-TT-GGAAATGATCC-GGTAGCAGA
i Mesoplodon_bidens.MesBid_scaffold_1172853             n 68 n 68
s Microcebus_murinus.CM007691.1                          16511206 46 +  47401472 ------------------------------------TT--CTACTCTTATCA---CTCACAT-A--GA-TT-ACAAATGACCT-GATAGCAGA
i Microcebus_murinus.CM007691.1                         I 19 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  39339 66 -     48017 A-----T-GG-ACAAC--TTCTG-GC-AT---C-T-CT--TCATTGTTTCCA---CACATAT-A--GA-AT-GAAAGTGAATT-GACTGCAAT
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               23943 25 -     32043 C-----T-GG-GGAAG--TTCTG-GG-TT---C-T-CT--CCA--------------------------------------------------
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 I 7
s Microtus_ochrogaster.CM001673.1                        22820842 66 -  98408828 C-----T-AG-GAATG--TTCTG-AC-TC---T-T-CG--CTACTTTTCCTC---ATTGCAT-G--AA-TT-CAGGGTACAAT-GATAGAATA
i Microtus_ochrogaster.CM001673.1                       I 2 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8212042 40 +  10048721 --------------------------------------------TTCTCCCA---CTGATAG-A--GA-TC-AGAATTGATCG-GATAACAGG
i Miniopterus_natalensis.LDJU01000022.1                 I 21 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            36531 40 +     45743 --------------------------------------------TTCTCCCA---CTGATAG-A--AA-TC-AGAATTGATCG-GTTAACAGG
i Miniopterus_schreibersii.MinSch_scaffold_24116        I 21 C 0
s Miopithecus_ogouensis.k141_2935907                         3488 67 +     29742 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCTCCCAA--ATCATGT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        12543 66 -    104932 C-----T-GG-GAATA--CTCTG-GG-TT---C-T-CT--CCACCCTTCCCA---CTCATAT-A--GA-TT-TGTAATTGTCT-GCTATCTGA
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     6595 46 +      8497 ------------------------------------TT--CTTCTCTTATCA---CTCACAT-A--GA-TT-ACAAATGACCT-GATAGCAGA
i Mirza_zaza.k141_226143                                I 19 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 147434 68 +    154973 C-----G-GG-GAAAG--TTCTG-GG-GT---C-C-TTCCCCACCCTTCCCA---CTGTTAC-A--GA-TT-GGAAATGATCA-GGTAGCAGA
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                162478 25 +    265003 C-----T-GG-GAAAG--TTCTG-GG-TT---C-T-CT--CTG--------------------------------------------------
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 I 10
s Moschus_moschiferus.MosMos_scaffold_78805                  2528 66 -     19904 C-----T-GA-GGAAG--TTCTG-GG-TT---C-T-TT--CCACTCTTCCCA---CTGATAT-A--GA-GT-GGAAATAATCG-GGTAGCAGA
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  145963 66 -    168139 C-----T-GG-GAAAG--CTATC-GA-TT---C-T-CT--GCACCCTTCCCA---CTCATAT-A--GA-TT-TGTAATTATCT-GCTATCTGA
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          23463 62 -    100666 A-----T-GG-GAAGT--CTCTG-GG-TT---T-T-CT--TCACTTCTCCCA---ATGATAG-A--GG-CA-GAT----AGCA-GATAGCAGG
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             13314 66 +     98495 C-----T-AG-GAAAG--TTCTG-GC-TT---C-T-CT--CCACTTTTCCCA---TTTATAC-A--TA-TT-GGAAATAATAC-GATAGTACC
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4425420 65 -  28371801 C-----T-GG-GAAAA--CTCTG-GG-CT---C-T-CT--CCACCCTTCATA----TCATGC-A--GA-TT-TCTAATTGTCT-GCTATATGG
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     91436 52 -    117718 -------------------------G-TT---G-G-TT--CCACTGTCCACA---TTCACAC-A--TACATCAGAAATAATGT-GGTGG-AGG
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 15 C 0
s Myotis_brandtii.KE161952.1                               970324 66 +   8389877 C-----T-GG-GAAAT--CTCTG-GG-TT---T-T-CT--CCACTTCTACCA---CTGATAG-A--GA-TA-GGAATTGATCA-GATAGCAGG
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5021749 66 +   6462685 C-----T-GG-GAAAT--CTCTG-GG-TT---T-T-CT--CCACTTCTACCA---CTGATAG-A--GA-TA-GGAATTGATCA-GATAGCAGG
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3467827 66 -   3747815 C-----T-GG-GAAAT--CTCTG-GG-TT---T-T-CT--CCACTTCTACCA---CTGATAG-A--GA-TA-GGAATTGATCA-GATAGCAGG
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        13070 66 +     66751 C-----T-GG-GAAAT--CTCTG-GG-TT---T-T-CT--CCACTTCTACCA---CTGATAG-A--GA-TA-GGAATTGATCA-GATAGCAGG
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             6080 65 -      8794 C-----T-GT-AGTAGAACTATA-AA-CT---T-TGCT--CCACTCCTCCCA---CTCATAT-A--CG-TT-GGGAGTAATCT-TATAA----
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            119234 18 +    362372 t-----t-gg-ggaa---ttcta-aa-tt---g------------------------------------------------------------
i Nannospalax_galili.KL201303.1                         C 0 I 614
s Nasalis_larvatus.k141_153429                               9965 67 +     48152 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCTCCCAA--ATCATGT-G--GA-TT-GGTAATGATCT-GATGGAAGA
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4485933 66 -  14209539 C-----T-GG-GAATA--CTCTG-GG-TT---C-T-CT--CCACCCTTCCCA---CTCATAT-A--GA-TT-TGTAATTGTCT-GCTATCTGA
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3952046 68 -   4490290 C-----G-GG-GAAAG--TTCTG-GG-GT---C-C-TTCCCCACCCTTCCCA---CTGTTAT-A--GA-TT-GGAAATGATCA-GGTAGCAGA
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Nomascus_annamensis.k141_224620                             562 67 -      2316 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCTCCCAA--CTCATAT-T--GA-TT-GGTAATGATCT-GATAGAAGA
i Nomascus_annamensis.k141_224620                       C 0 C 0
s Nomascus_concolor.k141_226614                              2659 67 -      5092 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCTCCCAA--CTCATAT-T--GA-TT-GGTAATGATCT-GATAGAAGA
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_1032971                            233 67 -      1918 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCTCCCAA--CTCATAT-T--GA-TT-GGTAATGATCT-GATAGAAGA
i Nomascus_gabriellae.k141_1032971                      C 0 C 0
s Nomascus_siki_b.tarseq_80                             26411 67 -  18771707 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCTCCCAA--CTCATAT-T--GA-TT-GGTAATGATCT-GATAGAAGA
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  4081 67 +      4512 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCTCCCAA--CTCATAT-T--GA-TT-GGTAATGATCT-GATAGAAGA
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                32172 67 +   3668941 C-----T-GG-AAAAA--CTCTG-G--TT---C-T-CT--CCACTCTTCCCA---CTCATAT-ATAGA-TT-TGTAACCATCT-GCTATCTGA
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65568052 59 -  95554990 C-----T-CA-AAAAG--TTCTG-GT-TT---T-T-CT--CCATTCCTCTCC---CTATTAT-G--GA-TT-G-------TCT-GATGGCAGA
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            4778 59 +      6470 C-----T-CA-AAAAG--TTCTG-GT-TT---T-T-CT--CCATTCCTCTCC---CTATTAT-G--GA-TT-G-------TCT-GATGGCAGA
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65670385 59 +  89412551 C-----T-CA-AAAAG--TTCTG-GT-TT---T-T-CT--CCATTCCTCTCC---CTATTAT-G--GA-TT-G-------TCT-GATGGCAGA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Octodon_degus.JH651621.1                                3686935 53 +  10294119 -------------------------G-TT---G-T-TT--CCACTATTCCCA---CTCACAC-A--CATGTCAGAAATAATGT-GGTAGCAAG
i Octodon_degus.JH651621.1                              I 15 C 0
s Odobenus_rosmarus.KB229369.1                             680595 66 -   3126709 C-----T-GG-GAAAA--CTCTG-GG-TT---C-T-CT--CCACCCTTCCCA---CTCATAT-A--GA-TT-TGTAATTGTCT-GCTATCTGA
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1080723 46 +   1425656 ------------------------------------TC--CCACTCTTCCCA---CTGTTAT-A--GA-GT-GGAAATGATTA-GGTAGCAGA
i Odocoileus_virginianus.KZ101650.1                     I 8 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         38004 66 +     78940 C-----T-GA-GAAAG--TTCTT-GG-TT---C-T-TT--CCACTCTTCCCA---CTGTTAT-A--GA-GT-GGAAATGATCA-GGTAGCATA
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  126107 66 +    145789 C-----T-AG-GAAAG--TTCTG-AG-TT---T-T-TG--CAACTTTTCTTA---GTTGTAT-G--CA-TT-CAGGATACAAT-GATAGAATA
i Ondatra_zibethicus.OndZib_scaffold_6821               I 2 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  38287 66 +     62360 C-----A-AG-GAAAT--TTCTG-AG-TT---T-T-CT--CCATTCTTTCTA---TACCTAT-G--CA-TT-CAGGATAAAAC-AATAGAAGA
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7225731 68 -   7562323 C-----G-GG-GAAAG--TTCTG-GG-GT---C-C-TTCCCCACCCTTCCCA---CTGTTAT-A--GA-TT-GGAAATGATCA-GGTAGCAGA
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              60967 65 -     66828 A-----T-GG-AAAAA--TTCTG-GC-AT---C-T-CT--TCATTT-TCCCC---CTCATAT-A--AA-TT-GGGAGTGATCT-AATAGCAGG
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141877396 59 + 163896628 C-----T-GT-GAATG--CTCTG-GG-TT---C-T-GT--TCA---CTCCTG---TTTATGT-A--GC-TT-AGAAGAGAAATAGACA-----
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      309467 67 -    505867 C-----T-GG-AAAAA--CTCTG-G--TT---C-T-CT--CCACTCTTCCCA---CTCATAT-ATAGA-TT-TGTAACCATCT-GCTCTCTGA
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        1684 66 -     53940 C-----T-GA-AAAAG--TTCTG-GG-TT---T-T-CT--CCATTCCTCTCA---CTCACGT-G--GA-TT-GGAGACGACCT-GATGGCAGA
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18009665 66 -  38779656 C-----T-CA-AAAAG--TTCTG-GG-TT---T-T-CT--CCATTCCTCTCA---CTCACGT-G--GA-TT-GGAGACGACCT-GATGGCAGA
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134078304 66 - 275406953 T-----T-GA-GAAAG--TTCTG-GG-TT---C-T-TT--CCACTTTTCCCA---CTGCTAC-A--GA-GT-GGAAATGATCA-GGTAGCAGA
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      79519 66 +    140051 T-----T-GA-GAAAG--TTCTG-GG-TT---C-T-TT--CCACTCTTCCCA---CTGTTAC-A--GA-GT-GGAAATGATCA-GGTAGCGGA
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  35356 62 +    295523 C-----T-GG-GAAAG--CTATC-AG-TT---C-T-CT--TGTCCCTTCCCA---CTCATAT-A--GA-TT-TATAATT-----GCTATATGA
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3639106 62 +  18214204 C-----T-GG-GAAAG--CTATC-AG-TT---C-T-CT--TGTCCCTTCCCA---CTCATAT-A--GA-TT-TATAATT-----GCTATATGA
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5028782 62 -   6340057 C-----T-GG-GAAAG--CTATC-AG-TT---C-T-CT--TGTCCCTTCCCA---CTCATAT-A--GA-TT-TATAATT-----GCTATATGA
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1067153 66 -   1292953 T-----T-GA-GAAAG--TTCTG-GG-TT---C-T-TT--CCACTCTTCCCA---CTGTTAC-A--GA-GT-GGAAATGATCA-GGTAGCGGA
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188157721 67 - 188283584 C-----T-GA-TTAAG--TTTTG-gg-tt---t-t-ct--cccttcctcccaa--aTCATGT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                               813 67 +     25005 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCTCCCAA--ATCATGT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47515098 67 +  47705337 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCTCCCAA--ATCATGT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 69088 67 -    104429 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCTCCCAA--ATCATGT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    7617 67 +     14967 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCTCCCAA--ATCATGT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 3482 67 -      7628 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCTCCCAA--ATCATGT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    116840 66 -    135482 C-----T-GG-GAAAG--CTATC-GG-TT---C-T-CT--CCACCCTTCCCA---CTCATAT-T--GA-TT-TGTAATTGTCT-GCTATCTGA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           6369 66 -     23713 C-----T-CA-AAAAG--TTCTG-GT-TT---T-T-CT--CCATTCTTCTCA---CTCATAT-A--GA-TT-GGAAAAGACCT-GACAGCAGA
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            25683 65 -     27972 C-----T-C--AAAAG--TTCTG-GT-TT---T-T-CT--CCATTCTTCTCA---CTCATAT-G--GA-TT-GGAAAAGACCT-GACAGCAGA
i Perodicticus_potto.k141_713187                        C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4951275 14 -   8017169 ------------------------------------------------------------------------------AAATC-AATTGCAGA
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    14666 25 -     36578 ----------------------------------T-TC--CCACTCTTCCTA---TTCATAC-A--CA-------------------------
i Petromus_typicus.PetTyp_scaffold_33007                I 15 I 20
s Phocoena_phocoena.PhoPho_flattened_line_53071               188 68 +      8220 C-----G-GG-GAAAG--TTCTG-GG-GT---T-C-TTCCCCACCCTTCCCA---CTGTTAT-A--GA-TT-GGAAATGATCA-GGTAGCAGA
i Phocoena_phocoena.PhoPho_flattened_line_53071         N 0 C 0
s Piliocolobus_badius.k141_1987485                           3498 67 -      5908 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCTCCCAA--ATCATGT-G--GA-TT-GGTAATGATCT-GATGGAAGA
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       4116 67 -     17985 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCTCCCAA--ATCATGT-G--GA-TT-GGTAATGATCT-GATGGAAGA
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            3483 67 +      7694 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCTCCCAA--ATCATGT-G--GA-TT-GGTAATGATCT-GATGGAAGA
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26741967 67 +  26888534 C-----T-GA-TTAAG--TTTTG-gg-tt---t-t-ct--cccttcctcccaa--aTCATGT-G--GA-TT-GGTAATGATCT-GATGGAAGA
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pithecia_albicans.k141_991845                             44915 67 -     61926 C-----T-GG-CTAAG--TTTTG-GA-TT---T-T-CT--CCTGTCCCCCCAA--GTCATAT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        26298 67 +     78826 C-----T-GG-CTAAG--TTTTG-GA-TT---T-T-CT--CCTATCCCCCCAA--GTCATAT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                             10346 67 -     15800 C-----T-GG-CTAAG--TTTTG-GA-TT---T-T-CT--CCTGTCCCCCCAA--GTCATAT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        13545 67 -     16101 C-----T-GG-CTAAG--TTTTG-GA-TT---T-T-CT--CCTGTCCCCCCAA--GTCATAT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          6774 67 +      9673 C-----T-GG-CTAAG--TTTTG-GA-TT---T-T-CT--CCTGTCCCCCCAA--GTCATAT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13475774 67 -  19735023 C-----T-GG-CTAAG--TTTTG-GA-TT---T-T-CT--CCTATTCCCCCAA--GTCATAT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           14677 67 -     31692 C-----T-GG-CTAAG--TTTTG-GA-TT---T-T-CT--CCTGTCCCCCCAA--GTCATAT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           6652 68 +     21690 C-----T-GG-GAAAG--TTCTG-GG-TT---C-C-CTCCCCACCCTTCCCA---CTGTTAC-A--GA-TT-GGAAATCATCA-GGTAGCAGA
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       24013 67 +     44506 C-----T-GG-CTAAG--TTTTG-GA-TT---T-T-CT--CCTGTCTTCCTAA--GTCATAT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        24226 67 +     67491 C-----T-GG-CTAAG--TTTTG-GA-TT---T-T-CT--CCTGTCTTCCTAA--GTCATAT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      14465 67 -     98129 C-----T-GG-CTAAG--TTTTG-GA-TT---T-T-CT--CCTGTCTTCCTAA--GTCATAT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     24065 67 +    147771 C-----T-GG-CTAAG--TTTTG-GA-TT---T-T-CT--CCTGTCTTCCTAA--GTCATAT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                          701 67 -     43940 C-----T-GG-CTAAG--TTTTG-GA-TT---T-T-CT--CCTGTCTTCCTAA--GTCATAT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          4784 67 -     55515 C-----T-GG-CTAAG--TTTTG-GA-TT---T-T-CT--CCTGTCTTCCTAA--GTCATAT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         24138 67 +    152463 C-----T-GG-CTACG--TTTTG-GA-TT---T-T-CT--CCTGTCTTCCTAA--GTCATAT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       1855 67 -    119457 C-----T-GG-CTAAG--TTTTG-GA-TT---T-T-CT--CCTGTCTTCCTAA--GTCATAT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         13861 67 +    134592 C-----T-GG-CTAAG--TTTTG-GA-TT---T-T-CT--CCTGTCTTCCTAA--GTCATAT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          24448 67 -     75465 C-----T-GG-CTACG--TTTTG-GA-TT---T-T-CT--CCTGTCTTCCTAA--GTCATAT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              188605 41 -    373494 C-----T-GA-TTAAG--TTTTG-gg-tt---t-t-ct--cccttcctcccaa--cTCATG--------------------------------
i Pongo_abelii.NDHI03003816.1                           C 0 I 24
s Pongo_pygmaeus.ctg62                                   19809252 41 +  19899266 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCTCCCAA--CTCATG--------------------------------
i Pongo_pygmaeus.ctg62                                  C 0 I 24
s Presbytis_comata.k141_672698                               7245 67 -     15069 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCTCCCAA--ATCATGT-G--GA-TT-GGTAATGATCT-GATGGAAGA
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              7360 67 +     14865 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCTCCCAA--ATCATGT-G--GA-TT-GGTAATGATCT-GATGGAAGA
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6849545 46 +  12164890 ------------------------------------CT--CCACTCCTCTCA---CTCATAT-A--GA-TT-AGAAAAGACCT-GGCAGAAGA
i Prolemur_simus.MPIZ01000048.1                         I 19 C 0
s Propithecus_coquerelli.NW_012147863.1                     19719 46 -     30946 ------------------------------------nn--nnnnnnnnnnnn---nnnnnnn-n--nn-nn-nnnnnnnnnnn-nnnnnnnnn
i Propithecus_coquerelli.NW_012147863.1                 I 19 C 0
s Propithecus_coronatus.k141_1353159                         4624 46 +     11805 ------------------------------------CT--CCACTCCTCTCA---CTCATGT-A--GA-TT-AGAAATGACCT-CATAGGAGA
i Propithecus_coronatus.k141_1353159                    I 19 C 0
s Propithecus_diadema.k141_577245                           43972 46 +     52369 ------------------------------------CT--CCACTCCTCTCA---CTCATAT-A--GA-TT-AGAAATGACCT-GATAGCAGA
i Propithecus_diadema.k141_577245                       I 19 C 0
s Propithecus_edwardsi.k141_1317105                         36359 46 -     44753 ------------------------------------CT--CCACTCCTCTCA---CTCATAT-A--GA-TT-AGAAATGACCT-GATAGCAGA
i Propithecus_edwardsi.k141_1317105                     I 19 C 0
s Propithecus_perrieri.k141_7554                            18282 46 +     27322 ------------------------------------CT--CCACTCCTCTCA---CTCATAT-A--GA-TT-AGAAATGACCT-GATAACAGA
i Propithecus_perrieri.k141_7554                        I 19 C 0
s Propithecus_tattersalli.k141_907138                       17916 46 -     53241 ------------------------------------CT--CCACTCCTCTCA---CTCATGT-A--GA-TT-AGAAATGACCT-GATAGGAGA
i Propithecus_tattersalli.k141_907138                   I 19 C 0
s Propithecus_verreauxi.k141_158021                         40180 46 -     48185 ------------------------------------CT--CCACTCCTCTCA---CTCATGT-A--GA-TT-AGAAATGACCT-GATAGGAGA
i Propithecus_verreauxi.k141_158021                     I 19 C 0
s Pteronotus_parnellii.KE867983.1                            5124 25 -     27784 C-----T-GG-GAAAG--TTCTG-GG-TT---C-T-CT--CTC--------------------------------------------------
i Pteronotus_parnellii.KE867983.1                       C 0 I 10
s Pteronura_brasiliensis.PteBra_flattened_line_1343        247731 66 -    344369 C-----T-GG-GAAAA--CTCTG-GG-TT---C-T-CT--CCACCCTTCCTA--C-TCATGT-A--GA-TT-TGTAATTGTCT-GCTATATGA
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13247017 63 -  17261082 C-----T-AG-GAAAG--CTTCC-TG-TT---C-T-CT--CCACTTCTCCCA---CTAATAG-A--GA-TT-AGAAATGATCA-GATA---GA
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             604968 62 -   3946241 C-----T-AG--AAAG--CTTCC-TG-TT---C-T-CT--CCACTTCTCCCA---CTAATAG-A--GA-TT-AGAAATGATCA-GATA---GA
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131535377 62 - 161321710 C-----T-GG-GAAAG--CTATC-AG-TT---C-T-CT--TGTCCCTTCCCG---CTCATAT-A--GA-TT-TATAATT-----GCTATATGA
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             31349 67 +     56732 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCTCCCAA--ATCATGT-G--GA-TT-GGTAATGATCT-GATGGAAGA
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6807843 67 +   6970761 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCTCCCAA--ATCATGT-G--GA-TT-GGTAATGATCT-GATGGAAGA
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             7236 67 +     18040 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCTCCCAA--ATCATGT-G--GA-TT-GGTAATGATCT-GATGGAAGA
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                16835 46 +     68503 ------------------------------------TC--CCACTCTTCCCA---CTGTTAT-A--GA-GT-GGAAATGATTA-GGAAGCAGA
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 8 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1788893 66 +   2252614 C-----T-GA-GAAAA--CTCTg-cc-tt---c-t-ct--ccatttctcccg---CTGATAG-A--GA-TT-GGAAACGATCA-GATAGCAGA
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                            1632 67 -     17045 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCGTTCCTCCCAA--ATCATGT-G--GA-TT-GGTAATGATCT-GATGGAAGA
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206379120 67 - 206558726 C-----T-GA-TTAAG--TTTTG-gg-tt---t-t-ct--cccttcctcccaa--aTCATGT-G--GA-TT-GGTAATGATCT-GATGGAAGA
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44858022 67 -  45163003 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCGTTCCTCCCAA--ATCATGT-G--GA-TT-GGTAATGATCT-GATGGAAGA
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                20352 66 +    109198 C-----T-AG-GAAAG--CTTCC-TG-TT---C-T-CT--CCACTTCTCCCA---CTAATAG-T--GA-TT-AGAAATGATCA-GATAGCAGA
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       8980 66 +     12214 T-----T-GA-GAAAG--TTCTG-GG-TT---C-T-TT--CCACTCTTCCCA---CTGTTAC-A--GA-GT-GGAAATGATCA-GGTAGCAGA
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15673862 67 -  43202129 C-----T-GG-TTAAG--TTTTG-GA-TT---T-T-CT--CCTGTCCTCCCAA--GTCATAT-G--GA-TT-GGTAATGATTT-GATAGAAGA
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        5775 67 +     34089 C-----T-GG-TTAAG--TTTTG-GA-TT---T-T-CT--CCTGTCCTCCCAA--GTCATAT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              5717 67 -     60842 C-----T-GG-TTAAG--TTTTG-GA-TT---T-T-CT--CCTGTCCTCCCAA--GTCATAT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              5810 67 +     67014 C-----T-GG-TTAAG--TTTTG-GA-TT---T-T-CT--CCTGTCCTCCCAA--GTCATAT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              5788 67 +     60816 C-----T-GG-TTAAG--TTTTG-GA-TT---T-T-CT--CCTGTCCTCCCAA--GTCATAT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 5725 67 -     76454 C-----T-GG-TTAAG--TTTTG-GA-TT---T-T-CT--CCTGTCCTCCCAA--GTCATAT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17342457 67 -  30362882 C-----T-GT-TTAAG--TTTTG-GA-TT---T-T-CT--CCTGTCCACCCAA--GTCATAT-G--GA-TT-GTTAATGATCT-GACAGAAGA
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         21818 67 -     62485 C-----T-GT-TTAAG--TTTTG-GA-TT---T-T-CT--CCTGTCCACCCAA--GTCATAT-G--GA-TT-GTTAATGATCT-GACAGAAGA
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   37753 42 -    114521 ------------------------------------------ATTCCTCCTA---CTGACA-TA--GA-TT-AGAAATGATAC-AATAGCAGA
i Scalopus_aquaticus.ScaAqu_scaffold_9300               I 22 C 0
s Semnopithecus_entellus.k141_1572367                        4852 67 +     15331 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCTCCCAA--ATCACGT-G--GA-TT-GGTAATGATCT-GATGGAAGA
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      10227 67 +     20762 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCTCCCAA--ATCACGT-G--GA-TT-GGTAATGATCT-GATGGAAGA
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         120232 67 +    130994 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCTCCCAA--ATCACGT-G--GA-TT-GGTAATGATCT-GATGGAAGA
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           39011 67 +     46263 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCTCCCAA--ATCACGT-G--GA-TT-GGTAATGATCT-GATGGAAGA
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     32156 67 +     42640 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCTCCCAA--ATCACGT-G--GA-TT-GGTAATGATCT-GATGGAAGA
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        15178 67 +     30600 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCTCCCAA--ATCACGT-G--GA-TT-GGTAATGATCT-GATGGAAGA
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  101454 66 -    120886 C-----T-AG-GAATA--TTCTG-AG-TT---T-C-CT--CCACTCTTCCTA---ATAGTAT-G--CA-TT-TAGGATAAAAC-CATAGAAGA
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            19928 65 +    739146 C-----T-GG-GAAAG--CTCTG-GG-CT---C-T-CT--CCACAACTCCCA---CCGATA--A--AA-GT-GAAAATTATCA-GATAGCAGA
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17767504 45 -  27805282 -------------------------------------T--TCACTCCTCCCA---ATGATA-TA--AA-TT-GGAAATGAGCA-GATAGCAGA
i Sorex_araneus.JH798170.1                              I 12 C 0
s Spermophilus_dauricus.KZ294190.1                        2240793 64 +   2842873 C-----T-AG-AAGTC---TTTG-GG-TT---T-T-CT--CTGCTCTTCCCA---T-TATAC-A--TA-TT-GGAAATAATAT-GTTAGCAGA
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             236106 66 -    276980 C-----T-GA-GAAAA--TTCTG-GG-TT---C-T-CT--CAATCCTTCCCA---CTCATAT-A--GA-TT-TGTAATTGTCT-GTTATCTGA
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            28622 66 +     62062 C-----T-GG-GAAAG--CTATC-GG-TT---C-T-CT--CCACCCTGCCCA---CTCGTAT-A--GA-TT-TGTAATTATCT-GCTATCTGA
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189273130 60 + 218635234 ------------AAAG--CTCTG--C-TT---C-T-CT--CCACCCTTCTCC---CTGTCAT-A--GC-TT-AGAAGTGATCA-GGTGGCAGA
i Sus_scrofa.CM000824.4                                 I 1 C 0
s Symphalangus_syndactylus.tarseq_24                        16355 67 -  13920577 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCTCCCAA--CTCATAT-T--GA-TT-GGTAATGATCT-GATAGAAGA
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                1322 66 +     20549 C-----T-GG-GAAAA--CTCCA-GG-TT---C-T-CT--CCGCTTCTTCCA---CTGATAG-A--CA-TC-AGAATTGATCA-GATAGCCGG
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               15746 65 +     45698 C-----T-GT-AGTAGAACTATA-AA-TT---T-TGCT--CCACTCCTCCCA---CTCATAT-A--CG-TT-GGGAGTAATCT-GATAA----
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      808173 66 +   1148477 C-----T-GG-GAAAG--TTCTG-GG-TT---C-T-GT--CCAGTCCTCCCA---CTCATAT-A--GA-TT-GGAAAAGATCA-GATAGCCAG
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  58886 66 +     99546 C-----T-GG-GAAAG--CTCTG-GG-TT---C-T-GT--CCAGTCCTCCCA---CTCATAT-A--GA-TT-GGAAAAGATCA-GATAGCCAG
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194009249 67 - 194193292 C-----T-GA-TTAAG--TTTTG-gg-tt---t-t-ct--cccttcctcccaa--aTCATGT-G--GA-TT-GGTAATGATCT-GATAGAAGA
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             40019 49 -     47444 ----------------------------------T-TT--CCACTCTTCCTA---TTCATAC-A--CACACCAAAAAAGAAAT-GATAGCGGA
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         I 15 C 0
s Tolypeutes_matacus.TolMat_scaffold_269431                  6537 47 +      6782 ----------------------------------T-CC--ACACTCCTTGCA---TTTATAT-A--GA-TT-GAGAGATATAT-GATAATAGA
i Tolypeutes_matacus.TolMat_scaffold_269431             I 14 N 0
s Tonatia_saurophila.TonSau_scaffold_3334                  137099 25 -    259118 C-----T-GG-GAAAG--TTCTG-GG-TT---C-T-CT--CCA--------------------------------------------------
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 I 10
s Trachypithecus_auratus.k141_738098                        28499 67 +     38948 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCTCCCAA--ATCATGT-G--GA-TT-GGTAATGATCT-GATGGAAGA
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   22059 67 -     32910 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCTCCCAA--ATCATGT-G--GA-TT-GGTAATGATCT-GATGGAAGA
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      3960 67 -     12939 c-----t-ga-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCTCCCAA--ATCATGT-G--GA-TT-GGTAATGATCT-GATGGAAGA
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       3388 67 -     14244 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCTCCCAA--ATCATGT-G--GA-TT-GGTAATGATCT-GATGGAAGA
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           44786 67 -     54611 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCTCCCAA--ATCATGT-G--GA-TT-GGTAATGATCT-GATGGAAGA
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        2582 67 -     11566 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCTCCCAA--ATCATGT-G--GA-TT-GGTAATGATCT-GATGGAAGA
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     4766 67 -     15592 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCTCCCAA--ATCATGT-G--GA-TT-GGTAATGATCT-GATGGAAGA
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          3418 67 +     14371 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCTCCCAA--ATCATGT-G--GA-TT-GGTAATGATCT-GATGGAAGA
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   1704 67 +     12481 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCTCCCAA--ATCATGT-G--GA-TT-GGTAATGATCT-GATGGAAGA
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        1685 67 -     24393 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCTCCCAA--ATCATGT-G--GA-TT-GGTAATGATCT-GATGGAAGA
i Trachypithecus_melamera.k141_699241                   I 106 C 0
s Trachypithecus_obscurus.k141_1115109                       6829 67 -     28054 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCTCCCAA--ATCATGT-G--GA-TT-GGTAATGATCT-GATGGAAGA
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44661613 67 -  44834318 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCTCCCAA--ATCATGT-G--GA-TT-GGTAATGATCT-GATGGAAGA
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       3930 67 +     13828 C-----T-GA-TTAAG--TTTTG-GG-TT---T-T-CT--CCCTTCCTCCCAA--ATCATGT-G--GA-TT-GGTAATGATCT-GATGGAAGA
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   6173 63 +     90398 C-----T-GA-GAAAG--TTTGG-GT-TT---C-T-TT--CTACTCTTCCCA---GCATTAT-A--AA-TT-GGAAGTTATCA-GGAAGC---
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16086863 66 +  31416278 A-----T-AG-AAAAG--TTCTa-gc-tt---c-t-ct--ccctttctccca---ctCATAT-A--GA-TT-GGGAATGATCT-GACAGCAGA
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2794494 66 -   3938065 C-----C-GG-GAATG--GTCTG-AG-TT---C-T-CT--GCACTCTTCCCA---CTTATAC-A--AA-TT-GGAAATGATCT-GACAAGCGA
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    6597 67 +     13056 C-----C-GGGGAATG--GTCTG-AG-TT---C-T-TT--GCACTCTTCCCA---CTTACAC-A--AA-TT-GGAAATGATCT-GACAGGAGA
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69314447 68 -  96451834 C-----G-GG-GAAAG--TTCTG-GG-GT---C-C-TTCCCCACCCTTCCCA---CTGTTAT-G--GA-TT-GGAAATGATCA-GGTAGCAGA
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   8320 42 +     10241 ------------------------------------------ATTCCTCCCA---CTGACA-TT--GA-TT-AAAAATGATCC-AATAGCAGA
i Uropsilus_gracilis.UroGra_scaffold_69449              I 22 C 0
s Ursus_maritimus.KK498671.1                              6515851 66 +  28682327 C-----T-GG-GAAAA--CTCTG-GG-TT---C-T-CT--CCACTCTTCCCA---CTCCTAC-A--GA-TT-TGTAATTGTCT-CTTAACTGA
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  6180 46 -     20643 ------------------------------------CT--CCACTTGTCTCA---TTCATAT-A--GA-TT-AGAAATGACCT-GACAGAAGA
i Varecia_rubra.k141_432109                             I 19 C 0
s Varecia_variegata.k141_775891                             25715 46 -     33872 ------------------------------------CT--CCACTTGTCTCA---TTCATAT-A--GA-TT-AGAAATGACCT-GACAGAAGA
i Varecia_variegata.k141_775891                         I 19 C 0
s Vicugna_pacos.KN269600.1                                1525668 65 -   2331223 C-----T-AG-GAAAG--CTCTG-GG-TT---C-T-CT--CCACCTTTCCCA---CTGTCAC-A--GA-CT-GGAAGTGATCA-GGGAGCAG-
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                139567 67 -    281493 C-----T-GG-AAAAA--CTCTG-G--TT---C-T-CT--CCACTCTTCCCA---CTCATAT-ATAGA-TT-TGTAACCATCT-GCTATCTGA
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       127914 61 -    134049 C-----T-AG-GAATC---TTTG-GG-TT---C-T-CT--CTGCTCTTTCCA---T-TATAT-G--TA-TT-GGAAA---TAT-GTTAGCAGA
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        215322 66 -    227762 C-----T-GG-GAAAA--CTCTG-GG-TT---C-T-CT--CCACCCTTCCCA---CTCATAC-A--GA-TT-TGTAATTGTTT-GCTATCTGA
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     16856 66 -     20485 C-----T-AG-GGAAG--CTCTG-GT-TT---C-T-GT--CCATTCTTCCTA---TTCATGT-A--TA-TT-GGAAATAAAGC-AATAGAAGG
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           7939 68 -      8775 C-----T-GG-GAAAG--TTCTG-GG-TT---C-C-CTCCCCACCCTTCCCA---CTGTTAT-A--GA-TT-GGAAATGATCA-GGTAGCAGA
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Ochotona_princeps.JH802095.1                            4996729 2205 -  23139505 I
e Perognathus_longimembris.PerPac_flattened_line_19359        892 695 +     49596 I
e Dipodomys_ordii.KN672545.1                              3657363 894 +   4240102 I
e Procavia_capensis.ProCapCap_scaffold_149274                2467 1156 -      9567 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Megaderma_lyra.MegLyr_scaffold_3562                       64783 239 -    234502 I
e Heterohyrax_brucei.HetBruBak_scaffold_25354               61360 1157 +     73687 I
e Enhydra_lutris.KZ291749.1                              85873223  0 +  99434291 C
e Echinops_telfairi.JH980316.1                           22999931  2 -  44670279 I
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1008 325 -      5782 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19677 266 -    119109 I
e Tarsius_wallacei.k141_48636                               60532 3805 +     65473 I
e Tarsius_lariang.k141_609102                               27216 3812 +     42269 I
e Rattus_norvegicus.chr11                                13915860 1475 +  90463843 I
e Psammomys_obesus.NESX01026517.1                           36530 59 +     77221 I
e Mus_spretus.CM004110.1                                 74333573 2703 +  97876770 I
e Mus_pahari.LT608305.1                                  67557037 2889 +  89017189 I
e Mus_musculus.chr16                                     75490838 2711 +  98207768 I
e Mus_caroli.LT608236.1                                  70767758 3738 +  92629107 I
e Dolichotis_patagonum.DolPat_scaffold_14102                36772 276 -     73477 I
e Dasyprocta_punctata.DasPun_flattened_line_634             59553 276 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                18462 277 +     26546 I
e Cephalopachus_bancanus.k141_702587                         8788 3391 +     21754 I
e Cavia_tschudii.CavTsc_scaffold_488                       177453 271 +    436027 I
e Cavia_porcellus.DS562889.1                             15799262 290 -  24440124 I
e Cavia_aperea.AVPZ01000278.1                            15787326 288 -  24422027 I
e Carlito_syrichta.NW_007248099.1                          309764 3411 +    345090 I
e Pan_paniscus.CM003386.1                               127575888 480 - 205426864 I
e Pan_troglodytes.CM009241.2                            120153042 480 - 196562556 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               15071 2 +    209709 CA
s Acinonyx_jubatus.LLWD01000356.1                         2035079 2 +   3721120 TT
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    114932 2 -    189883 CA
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10658646 2 +  23371972 TC
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7095780 2 -  16596857 TC
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   18436 2 -     22067 Tg
i Allactaga_bullata.AllBul_scaffold_70162               C 0 I 237
s Allenopithecus_nigroviridis.k141_2469532                   2798 2 -     60446 CA
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         3515 2 -     29318 CA
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         2451 2 +     38766 CA
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          3409 2 -     80423 CA
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            11396 2 -     18050 CA
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_1710068                               1112 2 +      1555 CA
i Alouatta_caraya.k141_1710068                          C 0 C 0
s Alouatta_discolor.k141_811576                             12069 2 -     21359 CA
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                1692 2 +      2129 CA
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_2177643                          1069 2 -      1868 CA
i Alouatta_macconnelli.k141_2177643                     C 0 C 0
s Alouatta_nigerrima.k141_3537692                            1118 2 +      1660 CA
i Alouatta_nigerrima.k141_3537692                       C 0 C 0
s Alouatta_palliata.k141_2764429                             1038 2 -      1480 CA
i Alouatta_palliata.k141_2764429                        C 0 C 0
s Alouatta_puruensis.k141_131505                              325 2 +      4855 CA
i Alouatta_puruensis.k141_131505                        C 0 C 0
s Alouatta_seniculus.k141_1531728                            1253 2 -      1692 CA
i Alouatta_seniculus.k141_1531728                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3521219 2 +   4113121 TA
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      391592 2 -    631301 TG
i Anoura_caudifer.AnoCau_scaffold_422                   I 10 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            31804 2 +     33004 TA
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 63741 2 +     78111 CA
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            6684 2 +     22701 CA
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5750641 2 +   9889416 CA
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             7230 2 -    104377 CA
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               7232 2 +     23246 CA
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_231055                     1111 2 -      2492 CT
i Aplodontia_rufa.AprRuf_scaffold_231055                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        2029 2 +      9265 CA
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                10009 2 -     29036 TG
i Artibeus_jamaicensis.ArtJam_scaffold_41619            I 10 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9540505 2 +  39197703 CA
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             61778 2 +     85812 CA
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                12791 2 +     89302 CA
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             17292 2 -     58268 CA
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             65286 2 +    119057 CA
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               7255 2 -     25888 CA
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 7762 2 -     16375 CA
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               1378 2 +      6337 CA
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26381284 2 +  51448160 CA
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        6456 2 -     13118 CA
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   44325 2 -     72089 TA
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6560952 2 +   6870073 TA
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138141067 2 - 161108492 TA
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     573604 2 -    998990 TA
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136296800 2 - 158972876 TA
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1233881 2 -   1914593 TA
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               115144 2 -    171031 CA
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 14173 2 +    125063 CA
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                16216 2 -    216513 CA
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        8759 2 -    134917 CA
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s CanFam4.chr31                                          11520797 2 +  39901454 TC
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   15822 2 +     87036 TC
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11267466 2 -  35597290 TC
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11089999 2 +  39895921 TC
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16457012 2 -  44759192 TC
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21326290 2 + 157394656 TA
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135707518 2 - 157403528 TA
i Capra_hircus.CM004562.1                               C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   32191 2 +     33760 CA
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   159948 2 -    276539 CA
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18891979 2 -  29618158 CA
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 9523 2 -     26817 CA
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                13766 2 +     25043 CA
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4364999 2 +   7569818 CA
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         4756 2 -      9338 CA
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6556745 2 +   6739814 CC
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      28219 2 +     60454 CC
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          3426 2 -     21101 CC
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         60736 2 -    107033 CC
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        3615 2 -     17608 CA
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                           774 2 +     45019 CA
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                            858 2 +     15177 CA
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          3658 2 +     16677 CA
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           25828 2 +     35983 CA
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11992356 2 +  12117833 CA
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46479114 2 +  46592721 CA
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      42668 2 -     45581 CA
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       3670 2 +     35577 CA
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        3443 2 -     25661 CA
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        3422 2 -     17744 CA
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        23028 2 +     37128 CA
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           3846 2 -      6963 TA
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           60033 2 -     68416 TA
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            9085 2 +     13308 CA
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             6801 2 -     18223 CA
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             23819 2 +     25473 CA
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           42859 2 +     57117 CA
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          47538 2 +     54541 CA
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15962806 2 +  43084221 TA
i Chinchilla_lanigera.JH721867.1                        C 0 I 5
s Chiropotes_israelita.k141_1189915                         72345 2 +    196370 CA
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          16525 2 +     40510 CA
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15141025 2 -  15256731 CA
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      35634 2 -     53260 CA
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101146193 2 + 101219884 CA
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                17600 2 -     21363 CA
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           762905 2 +    964067 CA
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10888185 2 +  10971483 CA
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147666113 2 + 156195979 CA
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            18096 2 +     23629 CA
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60620660 2 +  78930452 CA
i Condylura_cristata.JH655880.1                         C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 279456 1 -    399297 -C
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53031576 2 +  72327488 CA
i Cricetulus_griseus.LT883672.1                         I 1196 C 0
s Crocidura_indochinensis.CroInd_scaffold_848148              633 2 +      1327 AA
i Crocidura_indochinensis.CroInd_scaffold_848148        C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            53135 2 -     70449 TT
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  209479 2 -    956709 ta
i Ctenodactylus_gundi.CteGun_scaffold_447               I 14 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 32162 2 -     67205 TA
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 I 5
s Dasypus_novemcinctus.JH568778.1                          184694 2 -   6883506 CA
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16845898 2 +  31942871 CA
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80037912 2 -  96802777 CA
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18700087 2 -  18957592 TG
i Desmodus_rotundus.KZ672188.1                          I 10 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 323651 2 +    993696 CA
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   4303 2 +    151128 CA
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   158005 2 +    228994 TA
i Dinomys_branickii.DinBra_scaffold_1996                C 0 I 5
s Eidolon_helvum.KE772537.1                                 13360 2 +     24177 AA
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1492551 2 +   1727528 TA
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7829798 2 +  15467074 CT
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        240549 2 -    369425 CA
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           7719 2 -      7838 CA
i Ellobius_talpinus.LOJH01090055.1                      C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4708050 2 +   6522550 CA
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5854289 2 -   7175178 CA
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13352789 2 +  41866177 CA
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          14279 2 +     92910 CA
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erythrocebus_patas.Contig8                             48778204 2 -  48907691 CA
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          316124 2 +    330699 CA
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             62580 2 +     89355 CA
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              6072 2 +     13586 CA
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               6004 2 -      6809 CA
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            12478 2 +     36558 CA
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             8795 2 +     60246 CA
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                12277 2 +    109717 CA
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                  262 2 -     19505 CA
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                16937 2 +     27497 CA
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           19393 2 +     26808 CA
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                34131 2 +     46535 CA
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              16857 2 -     29447 CA
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129894051 2 - 159252932 TT
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129281135 2 - 158578461 TT
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 22275 2 +     52776 tt
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13892471 2 -  19261668 TA
i Fukomys_damarensis.KN123630.1                         C 0 I 6
s Galago_moholi.ctg555                                     211935 2 -    847004 CA
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           14306 2 -     43889 CA
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          11375 2 +     27357 CA
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               157401 2 +    324696 CA
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    182344 2 -    189561 TA
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           14869 2 -     18683 TA
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               6785 2 -     14630 CA
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119653885 2 - 195582420 CA
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   78283 2 +    118900 TA
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         2862 2 +     10286 CA
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             1342 2 -     11661 CA
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             6668 2 +     56096 CA
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        29917 2 -     42470 CA
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        46545 2 -     54384 CA
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              18330 2 +     53719 TT
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                28579 2 -     91191 TA
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2552186 2 +  31725842 Ta
i Heterocephalus_glaber.JH602058.1                      C 0 I 6
s Hippopotamus_amphibius.HipAmp_scaffold_1308              148205 2 +    277961 CA
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      279493 2 -    477199 TA
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_345408               490 2 -       919 TA
i Hipposideros_galeritus.HipGal_scaffold_345408         I 57 C 0
s Hoolock_leuconedys.ctg79                                      6475 2 -   7690867 CA
i Hoolock_leuconedys.ctg79                                 I 67 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 18401 2 -     67322 TC
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hylobates_abbotti.k141_164775                              1258 2 -      2073 CA
i Hylobates_abbotti.k141_164775                         C 0 C 0
s Hylobates_agilis.k141_1362131                               267 2 +      1075 CA
i Hylobates_agilis.k141_1362131                         I 67 C 0
s Hylobates_klossii.k141_183401                               811 2 -      1272 CA
i Hylobates_klossii.k141_183401                         I 67 C 0
s Hylobates_pileatus_b.ContigUN                                 14626163 2 -  25970782 CA
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_950183                              859 2 +      2027 CA
i Hylobates_muelleri.k141_950183                        C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             35323 2 -     60944 CA
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     7263 2 +     22540 AA
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7126941 2 +  13083262 CT
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_5141390                                   1395 2 -      3181 CA
i Indri_indri.k141_5141390                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              10118 2 +     17520 CA
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH727545.1                                 2052 2 -      4668 ta
i Jaculus_jaculus.JH727545.1                            C 0 I 228
s Kogia_breviceps.KogBre_flattened_line_35920               24720 2 +     37189 CA
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          51376 2 -    147782 CA
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    4720 2 +     26176 CA
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258408220 2 - 285822530 CA
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        24971 2 +     39228 AA
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            54357 2 +     63517 AA
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        79619 2 +    116806 AA
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     32610 2 -     33031 AA
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3087082 2 -   3498232 TC
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lipotes_vexillifer.KE558548.1                            137074 2 +   3060487 CA
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19249822 2 +  19376315 CA
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           11657 2 +     84689 CA
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3779406 2 +   6799190 CA
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20595916 2 -  62548349 TG
i Loxodonta_africana.GL010040.1                         C 0 I 2
s Lycaon_pictus.CM007556.1                               11089455 2 +  39895028 TC
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             21579 2 +     74745 CA
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12708039 2 +  12821369 CA
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                 617 2 -     26467 CA
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           48484 2 +     63263 CA
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                  594 2 -     26361 CA
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 3771 2 -      7381 CA
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  47009 2 -     79256 CA
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196037111 2 + 196197964 CA
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11447277 2 +  11645122 CA
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   5963 2 -     46448 CA
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                3629 2 -     13212 CA
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 17306 2 -     55006 CA
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43842412 2 +  43892939 CA
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               18593 2 -     24607 CA
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               5960 2 -     27140 CA
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                702076 2 +    802869 AA
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43438994 2 -  43563597 CA
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4451808 2 -   4543643 CA
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            147158 2 +    252755 CA
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             37301 2 +     58827 CA
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36874849 1 +  64221397 -t
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             2120 2 -     87323 TC
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               14473 2 +     15977 CA
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1048185 2 -  26018355 ta
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_475714                    221 2 +       551 CA
i Mesoplodon_bidens.MesBid_scaffold_475714              I 68 C 0
s Microcebus_murinus.CM007691.1                          16511252 2 +  47401472 CA
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  39405 1 -     48017 T-
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22820908 2 -  98408828 CA
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8212082 2 +  10048721 CA
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            36571 2 +     45743 CA
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         3555 2 +     29742 CA
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        12609 2 -    104932 TC
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     6641 2 +      8497 CA
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 147502 2 +    154973 CA
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                162513 1 +    265003 T-
i Mormoops_blainvillei.MorMeg_scaffold_2952             I 10 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  2594 2 -     19904 TA
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  146029 2 -    168139 TT
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          23525 2 -    100666 CA
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             13380 2 +     98495 TA
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4425485 2 -  28371801 TC
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     91488 2 -    117718 TA
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 I 5
s Myotis_brandtii.KE161952.1                               970390 2 +   8389877 CA
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5021815 2 +   6462685 CA
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3467893 2 -   3747815 CA
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        13136 2 +     66751 CA
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             6145 2 -      8794 CA
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nasalis_larvatus.k141_153429                              10032 2 +     48152 CA
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4485999 2 -  14209539 TC
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3952114 2 -   4490290 CA
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Nomascus_annamensis.k141_224620                             629 2 -      2316 CA
i Nomascus_annamensis.k141_224620                       C 0 C 0
s Nomascus_concolor.k141_226614                              2726 2 -      5092 CA
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_1032971                            300 2 -      1918 CA
i Nomascus_gabriellae.k141_1032971                      C 0 C 0
s Nomascus_siki_b.tarseq_80                             26478 2 -  18771707 CA
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  4148 2 +      4512 CA
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                32239 2 +   3668941 TC
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65568111 2 -  95554990 CA
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            4837 2 +      6470 CA
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65670444 2 +  89412551 CA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Octodon_degus.JH651621.1                                3686988 2 +  10294119 TA
i Octodon_degus.JH651621.1                              C 0 I 5
s Odobenus_rosmarus.KB229369.1                             680661 2 -   3126709 TC
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1080769 2 +   1425656 TA
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         38070 2 +     78940 TA
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  126173 2 +    145789 CA
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  38353 2 +     62360 CA
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7225799 2 -   7562323 CA
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              61032 2 -     66828 CA
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      309534 2 -    505867 TC
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        1750 2 -     53940 CA
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18009731 2 -  38779656 CA
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134078370 2 - 275406953 TA
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      79585 2 +    140051 TA
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  35418 2 +    295523 TT
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3639168 2 +  18214204 TT
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5028844 2 -   6340057 TT
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1067219 2 -   1292953 TA
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188157788 2 - 188283584 CA
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                               880 2 +     25005 CA
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47515165 2 +  47705337 CA
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 69155 2 -    104429 CA
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    7684 2 +     14967 CA
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 3549 2 -      7628 CA
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    116906 2 -    135482 TC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           6435 2 -     23713 CA
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            25748 2 -     27972 CA
i Perodicticus_potto.k141_713187                        C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4951289 2 -   8017169 AG
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    14711 2 -     36578 CA
i Petromus_typicus.PetTyp_scaffold_33007                I 20 I 6
s Phocoena_phocoena.PhoPho_flattened_line_53071               256 2 +      8220 CA
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Piliocolobus_badius.k141_1987485                           3565 2 -      5908 CA
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       4183 2 -     17985 CA
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            3550 2 +      7694 CA
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26742034 2 +  26888534 CA
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pithecia_albicans.k141_991845                             44982 2 -     61926 CA
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        26365 2 +     78826 CA
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                             10413 2 -     15800 CA
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        13612 2 -     16101 CA
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          6841 2 +      9673 CA
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13475841 2 -  19735023 CA
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           14744 2 -     31692 CA
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           6720 2 +     21690 CA
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       24080 2 +     44506 CA
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        24293 2 +     67491 CA
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      14532 2 -     98129 CA
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     24132 2 +    147771 CA
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                          768 2 -     43940 CA
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          4851 2 -     55515 CA
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         24205 2 +    152463 CA
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       1922 2 -    119457 CA
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         13928 2 +    134592 CA
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          24515 2 -     75465 CA
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              188670 2 -    373494 CA
i Pongo_abelii.NDHI03003816.1                           I 24 C 0
s Pongo_pygmaeus.ctg62                                   19809317 2 +  19899266 CA
i Pongo_pygmaeus.ctg62                                  I 24 C 0
s Presbytis_comata.k141_672698                               7312 2 -     15069 CA
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              7427 2 +     14865 CA
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6849591 2 +  12164890 CA
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     19765 2 -     30946 nn
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         4670 2 +     11805 CA
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           44018 2 +     52369 CA
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         36405 2 -     44753 CA
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            18328 2 +     27322 CA
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       17962 2 -     53241 CC
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         40226 2 -     48185 CA
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Pteronotus_parnellii.KE867983.1                            5159 1 -     27784 T-
i Pteronotus_parnellii.KE867983.1                       I 10 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        247797 2 -    344369 TC
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13247080 2 -  17261082 AA
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             605030 2 -   3946241 AA
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131535439 2 - 161321710 TT
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             31416 2 +     56732 CA
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6807910 2 +   6970761 CA
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             7303 2 +     18040 CA
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                16881 2 +     68503 TA
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1788959 2 +   2252614 TA
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                            1699 2 -     17045 CA
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206379187 2 - 206558726 CA
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44858089 2 -  45163003 CA
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                20418 2 +    109198 AA
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       9046 2 +     12214 TA
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15673929 2 -  43202129 AA
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        5842 2 +     34089 AA
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              5784 2 -     60842 AA
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              5877 2 +     67014 AA
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              5855 2 +     60816 AA
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 5792 2 -     76454 AA
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17342524 2 -  30362882 CA
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         21885 2 -     62485 CA
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   37795 2 -    114521 CA
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        4919 2 +     15331 CA
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      10294 2 +     20762 CA
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         120299 2 +    130994 CA
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           39078 2 +     46263 CA
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     32223 2 +     42640 CA
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        15245 2 +     30600 CA
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  101520 2 -    120886 CA
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            19993 2 +    739146 CA
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17767549 2 -  27805282 AA
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2240857 2 +   2842873 CT
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             236172 2 -    276980 TT
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            28688 2 +     62062 TT
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189273190 2 + 218635234 CA
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        16422 2 -  13920577 CA
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                1388 2 +     20549 CA
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               15811 2 +     45698 CA
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      808239 2 +   1148477 CA
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  58952 2 +     99546 CA
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194009316 2 - 194193292 CA
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             40068 2 -     47444 CA
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 I 6
s Tolypeutes_matacus.TolMat_scaffold_1305119                    1 2 -       594 CA
i Tolypeutes_matacus.TolMat_scaffold_1305119            N 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  137134 2 -    259118 TG
i Tonatia_saurophila.TonSau_scaffold_3334               I 10 C 0
s Trachypithecus_auratus.k141_738098                        28566 2 +     38948 CA
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   22126 2 -     32910 CA
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      4027 2 -     12939 CA
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       3455 2 -     14244 CA
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           44853 2 -     54611 CA
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        2649 2 -     11566 CA
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     4833 2 -     15592 CA
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          3485 2 +     14371 CA
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   1771 2 +     12481 CA
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        1752 2 -     24393 CA
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       6896 2 -     28054 CA
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44661680 2 -  44834318 CA
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       3997 2 +     13828 CA
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   6236 1 +     90398 -A
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16086929 2 +  31416278 CA
i Trichechus_manatus.JH594618.1                         C 0 I 3
s Tupaia_chinensis.KB320831.1                             2794560 2 -   3938065 CA
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    6664 2 +     13056 CA
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69314515 2 -  96451834 CA
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   8362 2 +     10241 CA
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6515917 2 +  28682327 TC
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  6226 2 -     20643 CA
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             25761 2 -     33872 CA
i Varecia_variegata.k141_775891                         C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                139634 2 -    281493 TC
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       127975 2 -    134049 CT
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        215388 2 -    227762 TC
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     16922 2 -     20485 TA
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           8007 2 -      8775 CA
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Oryctolagus_cuniculus.CM000803.1                      141877455 0 + 163896628 C
e Ochotona_princeps.JH802095.1                            4996729 2205 -  23139505 I
e Lepus_americanus.LepAme_scaffold_62849                    14417 0 +     22452 C
e Perognathus_longimembris.PerPac_flattened_line_19359        892 695 +     49596 I
e Dipodomys_ordii.KN672545.1                              3657363 894 +   4240102 I
e Vicugna_pacos.KN269600.1                                1525733 0 -   2331223 C
e Procavia_capensis.ProCapCap_scaffold_149274                2467 1156 -      9567 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Micronycteris_hirsuta.MicHir_scaffold_37978               23968 7 -     32043 I
e Megaderma_lyra.MegLyr_scaffold_3562                       64783 239 -    234502 I
e Heterohyrax_brucei.HetBruBak_scaffold_25354               61360 1157 +     73687 I
e Enhydra_lutris.KZ291749.1                              85873223 0 +  99434291 C
e Echinops_telfairi.JH980316.1                           22999931 2 -  44670279 I
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1008 325 -      5782 I
e Carollia_perspicillata.CarPer_scaffold_4436               60789 10 +     67245 I
e Camelus_ferus.KB016973.1                                2974065 0 +   6889770 C
e Camelus_dromedarius.KN271192.1                           398329 0 -  15254737 C
e Camelus_bactrianus.KN276303.1                           3220628 0 -   8989139 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19677 266 -    119109 I
e Tarsius_wallacei.k141_48636                               60532 3805 +     65473 I
e Tarsius_lariang.k141_609102                               27216 3812 +     42269 I
e Rattus_norvegicus.chr11                                13915860 1475 +  90463843 I
e Psammomys_obesus.NESX01026517.1                           36530 59 +     77221 I
e Nannospalax_galili.KL201303.1                            119252 614 +    362372 I
e Mus_spretus.CM004110.1                                 74333573 2703 +  97876770 I
e Mus_pahari.LT608305.1                                  67557037 2889 +  89017189 I
e Mus_musculus.chr16                                     75490838 2711 +  98207768 I
e Mus_caroli.LT608236.1                                  70767758 3738 +  92629107 I
e Dolichotis_patagonum.DolPat_scaffold_14102                36772 276 -     73477 I
e Dasyprocta_punctata.DasPun_flattened_line_634             59553 276 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                18462 277 +     26546 I
e Cephalopachus_bancanus.k141_702587                         8788 3391 +     21754 I
e Cavia_tschudii.CavTsc_scaffold_488                       177453 271 +    436027 I
e Cavia_porcellus.DS562889.1                             15799262 290 -  24440124 I
e Cavia_aperea.AVPZ01000278.1                            15787326 288 -  24422027 I
e Carlito_syrichta.NW_007248099.1                          309764 3411 +    345090 I
e Pan_paniscus.CM003386.1                               127575888 480 - 205426864 I
e Pan_troglodytes.CM009241.2                            120153042 480 - 196562556 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               15073  9 +    209709 A-T-T---GC-------------------C-------------------AA------A
s Acinonyx_jubatus.LLWD01000356.1                         2035081  9 +   3721120 A-T-T---TC-------------------C-------------------AA------A
i Acinonyx_jubatus.LLWD01000356.1                       C 0 I 9
s Acomys_cahirinus.AcoCah_scaffold_1625                    114934  6 -    189883 A-A-C---AC-------------------T----------------------------
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 I 8
s Ailuropoda_melanoleuca.LNAT01000321.1                  10658648  9 +  23371972 A-T-T---TC-------------------C-------------------AA------A
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 I 9
s Ailurus_fulgens.LNAC01000003.1                          7095782  9 -  16596857 A-T-T---TC-------------------C-------------------AA------A
i Ailurus_fulgens.LNAC01000003.1                        C 0 I 9
s Allactaga_bullata.AllBul_scaffold_70162                   18675 28 -     22067 A-A-A---AT-------------------TAAAGTTGAATCTGATTGATAA------A
i Allactaga_bullata.AllBul_scaffold_70162               I 237 I 630
s Allenopithecus_nigroviridis.k141_2469532                   2800  9 -     60446 G-T-T---GC-------------------C-------------------AA------A
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         3517  9 -     29318 G-T-T---GC-------------------C-------------------AA------A
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         2453  9 +     38766 G-T-T---GC-------------------C-------------------AA------A
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          3411  9 -     80423 G-T-T---GC-------------------C-------------------AA------A
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            11398  9 -     18050 A-C-T---GC-------------------C-------------------AC------A
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_1710068                               1114  9 +      1555 A-C-T---GC-------------------C-------------------AC------A
i Alouatta_caraya.k141_1710068                          C 0 C 0
s Alouatta_discolor.k141_811576                             12071  9 -     21359 A-C-T---GC-------------------C-------------------AC------A
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                1694  9 +      2129 A-C-T---GC-------------------C-------------------AC------A
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_2177643                          1071  9 -      1868 A-C-T---GC-------------------C-------------------AC------A
i Alouatta_macconnelli.k141_2177643                     C 0 C 0
s Alouatta_nigerrima.k141_3537692                            1120  9 +      1660 A-C-T---GC-------------------C-------------------AC------A
i Alouatta_nigerrima.k141_3537692                       C 0 C 0
s Alouatta_palliata.k141_2764429                             1040  9 -      1480 A-C-T---GC-------------------C-------------------AC------A
i Alouatta_palliata.k141_2764429                        C 0 C 0
s Alouatta_puruensis.k141_131505                              327  9 +      4855 A-C-T---GC-------------------C-------------------AC------A
i Alouatta_puruensis.k141_131505                        C 0 C 0
s Alouatta_seniculus.k141_1531728                            1255  9 -      1692 A-C-T---GC-------------------C-------------------AC------A
i Alouatta_seniculus.k141_1531728                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3521221  9 +   4113121 G-T-T---AC-------------------T-------------------AA------G
i Ammotragus_lervia.NIVO01013474.1                      C 0 I 14
s Anoura_caudifer.AnoCau_scaffold_422                      391594  9 -    631301 A-T-G---AC-------------------T-------------------GA------A
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 I 9
s Antilocapra_americana.AntAmePen_scaffold_42841            31806  9 +     33004 G-T-T---AC-------------------T-------------------AA------G
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 I 9
s Aotus_azarae.k141_3170768                                 63743  9 +     78111 A-T-T---GC-------------------C-------------------AA------A
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            6686  9 +     22701 A-T-T---GC-------------------C-------------------AA------A
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5750643  9 +   9889416 A-T-T---gc-------------------c-------------------aa------a
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             7232  9 -    104377 A-T-T---GC-------------------C-------------------AA------A
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               7234  9 +     23246 A-T-T---GC-------------------C-------------------AA------A
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_231055                     1113  9 -      2492 G-T-T---AC-------------------T-------------------AA------A
i Aplodontia_rufa.AprRuf_scaffold_231055                C 0 I 9
s Arctocebus_calabarensis.k141_587554                        2031  9 +      9265 A-T-T---AC-------------------G-------------------GG------A
i Arctocebus_calabarensis.k141_587554                   C 0 I 9
s Artibeus_jamaicensis.ArtJam_scaffold_41619                10011  9 -     29036 G-T-G---AC-------------------T-------------------GA------A
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 I 9
s Ateles_geoffroyi_b.tarseq_2582                             9540507  9 +  39197703 A-C-T---GC-------------------C-------------------AC------A
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             61780  9 +     85812 A-C-T---GC-------------------C-------------------AC------A
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                12793  9 +     89302 A-C-T---GC-------------------C-------------------AC------A
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             17294  9 -     58268 A-C-T---GC-------------------C-------------------AC------A
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             65288  9 +    119057 A-C-T---GC-------------------C-------------------AC------A
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               7257  9 -     25888 A-C-T---GC-------------------C-------------------AC------A
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 7764  9 -     16375 A-T-T---AC-------------------A-------------------AG------A
i Avahi_laniger.k141_2840928                            C 0 I 9
s Avahi_peyrierasi.k141_798820                               1380  9 +      6337 A-T-T---AC-------------------A-------------------AG------A
i Avahi_peyrierasi.k141_798820                          C 0 I 9
s Balaenoptera_acutorostrata.KI537095.1                  26381286  9 +  51448160 G-T-T---AT-------------------T-------------------AA------A
i Balaenoptera_acutorostrata.KI537095.1                 C 0 I 9
s Balaenoptera_bonaerensis.DF502048.1                        6458  9 -     13118 G-T-T---AT-------------------T-------------------AA------A
i Balaenoptera_bonaerensis.DF502048.1                   C 0 I 9
s Beatragus_hunteri.BeaHun_scaffold_21644                   44327  9 -     72089 G-T-T---AC-------------------T-------------------AA------G
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 I 14
s Bison_bison.KN264915.1                                  6560954  9 +   6870073 G-T-T---AC-------------------T-------------------AA------G
i Bison_bison.KN264915.1                                C 0 I 9
s Bos_indicus.CM003021.1                                138141069  9 - 161108492 G-T-T---AC-------------------T-------------------AA------G
i Bos_indicus.CM003021.1                                C 0 I 9
s Bos_mutus.JH883513.1                                     573606  9 -    998990 G-T-T---AC-------------------T-------------------AA------G
i Bos_mutus.JH883513.1                                  C 0 I 9
s Bos_taurus.CM000177.6                                 136296802  9 - 158972876 G-T-T---AC-------------------T-------------------AA------G
i Bos_taurus.CM000177.6                                 C 0 I 9
s Bubalus_bubalis.KI419065.1                              1233883  9 -   1914593 G-T-T---AC-------------------T-------------------AA------G
i Bubalus_bubalis.KI419065.1                            C 0 I 9
s Cacajao_ayresi.k141_724503                               115146  9 -    171031 A-T-T---GC-------------------C-------------------AA------A
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 14175  9 +    125063 A-T-T---GC-------------------C-------------------AA------A
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                16218  9 -    216513 A-T-T---GC-------------------C-------------------AA------A
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        8761  9 -    134917 A-T-T---GC-------------------C-------------------AA------A
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3220628  8 -   8989139 --T-T---AC-------------------T-------------------AA------A
i Camelus_bactrianus.KN276303.1                         C 0 I 9
s Camelus_dromedarius.KN271192.1                           398329  8 -  15254737 --T-T---AC-------------------T-------------------AA------A
i Camelus_dromedarius.KN271192.1                        C 0 I 9
s Camelus_ferus.KB016973.1                                2974065  8 +   6889770 --T-T---AC-------------------T-------------------AA------A
i Camelus_ferus.KB016973.1                              C 0 I 9
s CanFam4.chr31                                          11520799  9 +  39901454 A-T-T---TC-------------------C-------------------AA------A
i CanFam4.chr31                                         C 0 I 33
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   15824  9 +     87036 A-T-T---TC-------------------C-------------------AA------A
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 I 33
s Canis_lupus_dingo.QKWQ01001993.1                       11267468  9 -  35597290 A-T-T---TC-------------------C-------------------AA------A
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 I 33
s Canis_lupus_familiaris.chr31                           11090001  9 +  39895921 A-T-T---TC-------------------C-------------------AA------A
i Canis_lupus_familiaris.chr31                          C 0 I 33
s Canis_lupus_orion.HG994411.1                           16457014  9 -  44759192 A-T-T---TC-------------------C-------------------AA------A
i Canis_lupus_orion.HG994411.1                          C 0 I 33
s Capra_aegagrus.CM003214.1                              21326292  9 + 157394656 G-T-T---AC-------------------T-------------------AA------G
i Capra_aegagrus.CM003214.1                             C 0 I 14
s Capra_hircus.CM004562.1                               135707520  9 - 157403528 G-T-T---AC-------------------T-------------------AA------G
i Capra_hircus.CM004562.1                               C 0 I 14
s Carollia_perspicillata.CarPer_scaffold_4436               60799  8 +     67245 --T-G---AC-------------------T-------------------GA------G
i Carollia_perspicillata.CarPer_scaffold_4436           I 10 I 9
s Castor_canadensis.CasCan_scaffold_47037                   32193  6 +     33760 A-T-T---AC-------------------T----------------------------
i Castor_canadensis.CasCan_scaffold_47037               C 0 I 12
s Catagonus_wagneri.CatWag_scaffold_1305                   159950  9 -    276539 G-T-T---AA-------------------T-------------------AA------A
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 I 295
s Cebus_albifrons.Contig22                               18891981  9 -  29618158 A-C-T---GC-------------------C-------------------AA------A
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 9525  9 -     26817 A-C-T---GC-------------------C-------------------AA------A
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                13768  9 +     25043 A-C-T---GC-------------------C-------------------AA------A
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4365001  9 +   7569818 A-T-T---AT-------------------T-------------------AA------A
i Ceratotherium_simum.JH767818.1                        C 0 I 9
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         4758  9 -      9338 A-T-T---AT-------------------T-------------------AA------A
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 I 9
s Cercocebus_atys.KQ010443.1                              6556747  9 +   6739814 G-T-T---GC-------------------C-------------------AA------A
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      28221  9 +     60454 G-T-T---GC-------------------C-------------------AA------A
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          3428  9 -     21101 G-T-T---GC-------------------C-------------------AA------A
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         60738  9 -    107033 G-T-T---GC-------------------C-------------------AA------A
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        3617  9 -     17608 G-T-T---GC-------------------C-------------------AA------A
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                           776  9 +     45019 G-T-T---GC-------------------C-------------------AA------A
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                            860  9 +     15177 G-T-T---GC-------------------C-------------------AA------A
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          3660  9 +     16677 G-T-T---GC-------------------C-------------------AA------A
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           25830  9 +     35983 G-T-T---GC-------------------C-------------------AA------A
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11992358  9 +  12117833 G-T-T---GC-------------------C-------------------AA------A
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46479116  9 +  46592721 G-T-T---GC-------------------C-------------------AA------A
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      42670  9 -     45581 G-T-T---GC-------------------C-------------------AA------A
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       3672  9 +     35577 G-T-T---GC-------------------C-------------------AA------A
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        3445  9 -     25661 G-T-T---GC-------------------C-------------------AA------A
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        3424  9 -     17744 G-T-T---GC-------------------C-------------------AA------A
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        23030  9 +     37128 G-T-T---GC-------------------C-------------------AA------A
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           3848  2 -      6963 --------------------------------------------------A------A
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 I 9
s Cheirogaleus_major.k141_1157592                           60035  9 -     68416 A-T-T---AC-------------------T-------------------AG------A
i Cheirogaleus_major.k141_1157592                       C 0 I 9
s Cheirogaleus_medius.k141_133808                            9087  9 +     13308 A-T-T---AC-------------------T-------------------AG------A
i Cheirogaleus_medius.k141_133808                       C 0 I 9
s Cheracebus_lucifer.k141_619653                             6803  9 -     18223 A-T-T---GC-------------------C-------------------AA------A
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             23821  9 +     25473 A-T-T---GC-------------------C-------------------AA------A
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           42861  9 +     57117 A-T-T---GC-------------------C-------------------AA------A
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          47540  9 +     54541 A-T-T---GC-------------------C-------------------AA------A
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15962813  3 +  43084221 -------------------------------------------------AA------A
i Chinchilla_lanigera.JH721867.1                        I 5 I 9
s Chiropotes_israelita.k141_1189915                         72347  9 +    196370 A-T-T---GC-------------------C-------------------AA------A
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          16527  9 +     40510 A-T-T---GC-------------------C-------------------AA------A
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15141027  9 -  15256731 G-T-T---GC-------------------C-------------------AA------A
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      35636  9 -     53260 G-T-T---GC-------------------C-------------------AA------A
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101146195  9 + 101219884 G-T-T---GC-------------------C-------------------AA------A
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                17602  8 -     21363 --------------------------------------------------AAGATAAA
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 I 9
s Choloepus_hoffmanni.KN194586.1                           762907  8 +    964067 --------------------------------------------------AAGATAAA
i Choloepus_hoffmanni.KN194586.1                        C 0 I 9
s Colobus_angolensis.KN985967.1                          10888187  9 +  10971483 G-T-T---GC-------------------C-------------------AA------A
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147666115  9 + 156195979 G-T-T---GC-------------------C-------------------AA------A
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            18098  9 +     23629 G-T-T---GC-------------------C-------------------AA------A
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60620662  9 +  78930452 A-T-A---AC-------------------T-------------------AA------A
i Condylura_cristata.JH655880.1                         C 0 I 20
s Cricetomys_gambianus.CriGam_scaffold_949                 279457  6 -    399297 A-A-T---TA-------------------T----------------------------
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 I 18
s Cricetulus_griseus.LT883672.1                          53031578  6 +  72327488 A-A-C---AT-------------------T----------------------------
i Cricetulus_griseus.LT883672.1                         C 0 I 6
s Crocidura_indochinensis.CroInd_scaffold_848148              635  9 +      1327 A-T-T---AC-------------------T-------------------AA------A
i Crocidura_indochinensis.CroInd_scaffold_848148        C 0 I 7
s Cryptoprocta_ferox.CryFer_flattened_line_19014            53137  9 -     70449 A-T-T---TC-------------------T-------------------AA------A
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 I 9
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 32169  3 -     67205 -------------------------------------------------AG------G
i Ctenomys_sociabilis.CteSoc_scaffold_19489             I 5 I 9
s Dasypus_novemcinctus.JH568778.1                          184696  2 -   6883506 --------------------------------------------------A------A
i Dasypus_novemcinctus.JH568778.1                       C 0 I 9
s Ctenodactylus_gundi.CteGun_scaffold_447                  209481 25 -    956709 t-t-t---acaatgaatttgggtgtttcgt----------------------------
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 I 3013
s Daubentonia_madagascariensis.ctg11                     16845900  9 +  31942871 A-T-T---AC-------------------T-------------------AG------A
i Daubentonia_madagascariensis.ctg11                    C 0 I 9
s Delphinapterus_leucas.KZ290064.1                       80037914  9 -  96802777 G-T-T---AT-------------------T-------------------AA------A
i Delphinapterus_leucas.KZ290064.1                      C 0 I 9
s Desmodus_rotundus.KZ672188.1                           18700089  9 -  18957592 A-T-G---AC-------------------T-------------------GA------A
i Desmodus_rotundus.KZ672188.1                          C 0 I 9
s Dicerorhinus_sumatrensis.PEKH010003161.1                 323653  9 +    993696 A-T-T---AC-------------------T-------------------AA------A
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 I 9
s Diceros_bicornis.DicBicMic_scaffold_9545                   4305  9 +    151128 A-T-T---AC-------------------T-------------------AA------A
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 I 9
s Dinomys_branickii.DinBra_scaffold_1996                   158012  3 +    228994 -------------------------------------------------AA------A
i Dinomys_branickii.DinBra_scaffold_1996                I 5 I 9
s Eidolon_helvum.KE772537.1                                 13362  9 +     24177 A-T-G---AC-------------------T-------------------GA------A
i Eidolon_helvum.KE772537.1                             C 0 I 9
s Elaphurus_davidianus.JRFZ01086400.1                     1492553  9 +   1727528 G-T-T---AC-------------------T-------------------AA------G
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 I 9
s Elephantulus_edwardii.JH947210.1                        7829800 10 +  15467074 A-TTA---AC-------------------A-------------------AA------A
i Elephantulus_edwardii.JH947210.1                      C 0 I 9
s Ellobius_lutescens.LOEQ01003611.1                        240551  6 -    369425 A-A-C---GC-------------------T----------------------------
i Ellobius_lutescens.LOEQ01003611.1                     C 0 I 5
s Ellobius_talpinus.LOJH01090055.1                           7721  6 -      7838 A-A-C---AC-------------------T----------------------------
i Ellobius_talpinus.LOJH01090055.1                      C 0 I 5
s Enhydra_lutris.KZ291749.1                              85873223  9 +  99434291 A-T-T---TC-------------------C-------------------AA------A
i Enhydra_lutris.KZ291749.1                             C 0 I 9
s Eptesicus_fuscus.JH977687.1                             4708052  9 +   6522550 A-T-G---AT-------------------T-------------------AC------A
i Eptesicus_fuscus.JH977687.1                           C 0 I 9
s Equus_asinus.JREZ01000062.1                             5854291  9 -   7175178 A-T-T---AC-------------------C-------------------AA------A
i Equus_asinus.JREZ01000062.1                           C 0 I 9
s Equus_caballus.CM000402.2                              13352791  9 +  41866177 A-T-T---AC-------------------C-------------------AA------A
i Equus_caballus.CM000402.2                             C 0 I 9
s Equus_przewalskii.ATBW01073585.1                          14281  9 +     92910 A-T-T---AC-------------------C-------------------AA------A
i Equus_przewalskii.ATBW01073585.1                      C 0 I 9
s Erythrocebus_patas.Contig8                             48778206  9 -  48907691 G-T-T---GC-------------------C-------------------AA------A
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          316126  9 +    330699 G-T-T---AT-------------------T-------------------AA------A
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 I 9
s Eubalaena_japonica.EubJap_flattened_line_7756             62582  9 +     89355 G-T-T---AT-------------------T-------------------AA------A
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 I 9
s Eulemur_albifrons.k141_715837                              6074  9 +     13586 A-T-T---AC-------------------T-------------------AG------A
i Eulemur_albifrons.k141_715837                         C 0 I 9
s Eulemur_collaris.k141_311830                               6006  9 -      6809 A-T-T---AC-------------------T-------------------AG------A
i Eulemur_collaris.k141_311830                          C 0 I 9
s Eulemur_coronatus.k141_3240342                            12480  9 +     36558 A-T-T---AC-------------------T-------------------AG------A
i Eulemur_coronatus.k141_3240342                        C 0 I 9
s Eulemur_flavifrons.k141_903901                             8797  9 +     60246 A-T-T---AC-------------------T-------------------AG------A
i Eulemur_flavifrons.k141_903901                        C 0 I 9
s Eulemur_fulvus.k141_653297                                12279  9 +    109717 A-T-T---AC-------------------T-------------------AG------A
i Eulemur_fulvus.k141_653297                            C 0 I 9
s Eulemur_macaco.k141_747087                                  264  9 -     19505 A-T-T---AC-------------------T-------------------AG------A
i Eulemur_macaco.k141_747087                            C 0 I 9
s Eulemur_mongoz.k141_825972                                16939  9 +     27497 A-T-T---AC-------------------T-------------------AG------A
i Eulemur_mongoz.k141_825972                            C 0 I 9
s Eulemur_rubriventer.k141_411740                           19395  9 +     26808 A-T-T---AC-------------------T-------------------AG------A
i Eulemur_rubriventer.k141_411740                       C 0 I 9
s Eulemur_rufus.k141_1620292                                34133  9 +     46535 A-T-T---AC-------------------T-------------------AG------A
i Eulemur_rufus.k141_1620292                            C 0 I 9
s Eulemur_sanfordi.k141_186399                              16859  9 -     29447 A-T-T---AC-------------------T-------------------AG------A
i Eulemur_sanfordi.k141_186399                          C 0 I 9
s Felis_catus.CM001386.2                                129894053  9 - 159252932 A-T-T---TC-------------------C-------------------AA------A
i Felis_catus.CM001386.2                                C 0 I 9
s Felis_catus_fca126.CM031420.1                         129281137  9 - 158578461 A-T-T---TC-------------------C-------------------AA------A
i Felis_catus_fca126.CM031420.1                         C 0 I 9
s Felis_nigripes.FelNig_flattened_line_8080                 22277  9 +     52776 a-t-t---tc-------------------c-------------------aa------a
i Felis_nigripes.FelNig_flattened_line_8080             C 0 I 9
s Fukomys_damarensis.KN123630.1                          13892479  3 -  19261668 -------------------------------------------------AA------A
i Fukomys_damarensis.KN123630.1                         I 6 I 6
s Galago_moholi.ctg555                                     211937  9 -    847004 A-T-T---AC-------------------T-------------------GG------A
i Galago_moholi.ctg555                                  C 0 I 9
s Galago_senegalensis.k141_964197                           14308  9 -     43889 A-T-T---AC-------------------T-------------------GG------A
i Galago_senegalensis.k141_964197                       C 0 I 9
s Galagoides_demidoff.k141_1769638                          11377  9 +     27357 A-T-T---AC-------------------T-------------------GC------A
i Galagoides_demidoff.k141_1769638                      C 0 I 9
s Galeopterus_variegatus.GalVar_scaffold_354               157403  9 +    324696 A-T-T---AC-------------------T-------------------AA------A
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 I 9
s Giraffa_tippelskirchi.LVKQ01S012154.1                    182346  9 -    189561 G-T-T---AC-------------------T-------------------AA------G
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 I 9
s Glis_glis.GliGli_scaffold_79770                           14871  9 -     18683 A-T-T---GC-------------------T-------------------AA------A
i Glis_glis.GliGli_scaffold_79770                       C 0 I 9
s Gorilla_beringei.k141_111300                               6787  9 -     14630 A-T-T---GC-------------------C-------------------AA------A
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119653887  9 - 195582420 A-T-t---gc-------------------c-------------------aa------a
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   78285  9 +    118900 A-C-T---AG-------------------T-------------------CA------A
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 I 9
s Hapalemur_alaotrensis.k141_1280836                         2864  9 +     10286 A-T-T---AC-------------------T-------------------AG------A
i Hapalemur_alaotrensis.k141_1280836                    C 0 I 9
s Hapalemur_gilberti.k141_279011                             1344  9 -     11661 A-T-T---AC-------------------T-------------------AG------A
i Hapalemur_gilberti.k141_279011                        C 0 I 9
s Hapalemur_griseus.k141_1387522                             6670  9 +     56096 A-T-T---AC-------------------T-------------------AG------A
i Hapalemur_griseus.k141_1387522                        C 0 I 9
s Hapalemur_meridionalis.k141_186231                        29919  9 -     42470 A-T-T---AT-------------------T-------------------AG------A
i Hapalemur_meridionalis.k141_186231                    C 0 I 9
s Hapalemur_occidentalis.k141_797938                        46547  9 -     54384 A-T-T---AC-------------------T-------------------AG------A
i Hapalemur_occidentalis.k141_797938                    C 0 I 9
s Helogale_parvula.HelPar_flattened_line_22962              18332  9 +     53719 A-T-T---TC-------------------T-------------------AA------A
i Helogale_parvula.HelPar_flattened_line_22962          C 0 I 9
s Hemitragus_hylocrius.HemHyl_scaffold_16669                28581  9 -     91191 G-T-T---AC-------------------T-------------------AA------G
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 I 14
s Heterocephalus_glaber.JH602058.1                        2552194  3 +  31725842 -------------------------------------------------aa------a
i Heterocephalus_glaber.JH602058.1                      I 6 I 9
s Hippopotamus_amphibius.HipAmp_scaffold_1308              148207  9 +    277961 A-T-A---AC-------------------T-------------------AA------A
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 I 9
s Hipposideros_armiger.JXIK01001085.1                      279495  9 -    477199 A-T-G---AC-------------------T-------------------AA------A
i Hipposideros_armiger.JXIK01001085.1                   C 0 I 9
s Hipposideros_galeritus.HipGal_scaffold_345408               492  9 -       919 A-T-G---AC-------------------T-------------------AA------A
i Hipposideros_galeritus.HipGal_scaffold_345408         C 0 I 9
s Hoolock_leuconedys.ctg79                                      6477  9 -   7690867 A-T-T---GC-------------------C-------------------AA------A
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 18403  9 -     67322 A-T-A---TC-------------------T-------------------AA------A
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 I 9
s Hylobates_abbotti.k141_164775                              1260  9 -      2073 A-T-T---GC-------------------C-------------------AA------A
i Hylobates_abbotti.k141_164775                         C 0 C 0
s Hylobates_agilis.k141_1362131                               269  9 +      1075 A-T-T---GC-------------------C-------------------AA------A
i Hylobates_agilis.k141_1362131                         C 0 C 0
s Hylobates_klossii.k141_183401                               813  9 -      1272 A-T-T---GC-------------------C-------------------AA------A
i Hylobates_klossii.k141_183401                         C 0 I 11
s Hylobates_pileatus_b.ContigUN                                 14626165  9 -  25970782 A-T-T---GC-------------------C-------------------AA------A
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_950183                              861  9 +      2027 A-T-T---GC-------------------C-------------------AA------A
i Hylobates_muelleri.k141_950183                        C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             35325  9 -     60944 A-T-T---GC-------------------C-------------------AA------A
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     7265  5 +     22540 A-T-T---AC------------------------------------------------
i Hystrix_cristata.HysCri_scaffold_50788                C 0 I 13
s Ictidomys_tridecemlineatus.JH393315.1                   7126943  9 +  13083262 A-T-T---AC-------------------C-------------------AA------A
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 I 9
s Indri_indri.k141_5141390                                   1397  9 -      3181 A-T-T---AC-------------------G-------------------AG------A
i Indri_indri.k141_5141390                              C 0 I 9
s Inia_geoffrensis.IniGeo_flattened_line_66725              10120  9 +     17520 G-T-T---AT-------------------T-------------------AA------A
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 I 9
s Jaculus_jaculus.JH727545.1                                 2282 28 -      4668 a-A-A---AT-------------------TAAAGTTGGATCTGATTGATAA------A
i Jaculus_jaculus.JH727545.1                            I 228 I 1
s Kogia_breviceps.KogBre_flattened_line_35920               24722  9 +     37189 G-T-T---AT-------------------T-------------------AA------A
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 I 9
s Lagothrix_lagothricha.k141_12968                          51378  9 -    147782 A-C-T---GC-------------------C-------------------AC------A
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    4722  9 +     26176 A-T-G---AT-------------------T-------------------AC------A
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 I 9
s Lemur_catta.scaffold_1                                258408222  9 - 285822530 A-T-T---AC-------------------T-------------------AG------A
i Lemur_catta.scaffold_1                                C 0 I 9
s Lepilemur_ankaranensis.k141_884009                        24973  9 +     39228 A-T-T---AC-------------------T-------------------AG------A
i Lepilemur_ankaranensis.k141_884009                    C 0 I 9
s Lepilemur_dorsalis.k141_134267                            54359  9 +     63517 A-T-T---AC-------------------T-------------------AG------A
i Lepilemur_dorsalis.k141_134267                        C 0 I 9
s Lepilemur_ruficaudatus.k141_617879                        79621  9 +    116806 A-T-T---AC-------------------T-------------------AG------A
i Lepilemur_ruficaudatus.k141_617879                    C 0 I 9
s Lepilemur_septentrionalis.k141_578524                     32612  9 -     33031 A-T-T---AC-------------------T-------------------AG------A
i Lepilemur_septentrionalis.k141_578524                 C 0 I 9
s Leptonychotes_weddellii.KB714749.1                      3087084  9 -   3498232 A-T-T---TC-------------------C-------------------AA------A
i Leptonychotes_weddellii.KB714749.1                    C 0 I 9
s Lepus_americanus.LepAme_scaffold_62849                    14417  9 +     22452 G-C-T---AG-------------------T-------------------AC------A
i Lepus_americanus.LepAme_scaffold_62849                C 0 I 9
s Lipotes_vexillifer.KE558548.1                            137076  9 +   3060487 G-T-T---AT-------------------T-------------------AA------A
i Lipotes_vexillifer.KE558548.1                         C 0 I 9
s Lophocebus_aterrimus.ctg55                             19249824  9 +  19376315 G-T-T---GC-------------------C-------------------AA------A
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           11659  9 +     84689 A-T-T---AC-------------------T-------------------GG------A
i Loris_lydekkerianus.k141_550999                       C 0 I 9
s Loris_tardigradus.ctg97                                 3779408  9 +   6799190 A-T-T---AC-------------------T-------------------GG------A
i Loris_tardigradus.ctg97                               C 0 I 9
s Loxodonta_africana.GL010040.1                          20595920  6 -  62548349 --------AC-------------------T-------------------AA------A
i Loxodonta_africana.GL010040.1                         I 2 I 9
s Lycaon_pictus.CM007556.1                               11089457  9 +  39895028 A-T-T---TC-------------------C-------------------AA------A
i Lycaon_pictus.CM007556.1                              C 0 I 33
s Macaca_arctoides.k141_2201161                             21581  9 +     74745 G-T-T---GC-------------------C-------------------AA------A
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12708041  9 +  12821369 G-T-T---GC-------------------C-------------------AA------A
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                 619  9 -     26467 G-T-T---GC-------------------C-------------------AA------A
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           48486  9 +     63263 G-T-T---GC-------------------C-------------------AA------A
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                  596  9 -     26361 G-T-T---GC-------------------C-------------------AA------A
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 3773  9 -      7381 G-T-T---GC-------------------C-------------------AA------A
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  47011  9 -     79256 G-T-T---GC-------------------C-------------------AA------A
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196037113  9 + 196197964 G-T-T---Gc-------------------c-------------------aa------a
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11447279  9 +  11645122 G-T-T---GC-------------------c-------------------aa------a
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   5965  9 -     46448 G-T-T---GC-------------------C-------------------AA------A
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                3631  9 -     13212 G-T-T---GC-------------------C-------------------AA------A
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 17308  9 -     55006 G-T-T---GC-------------------C-------------------AA------A
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43842414  9 +  43892939 G-T-T---GC-------------------C-------------------AA------A
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               18595  9 -     24607 G-T-T---GC-------------------C-------------------AA------A
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               5962  9 -     27140 G-T-T---GC-------------------C-------------------AA------A
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                702078  9 +    802869 A-T-G---AA-------------------T-------------------GA------A
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 I 9
s Mandrillus_leucophaeus.scaffold125                     43438996  9 -  43563597 G-T-T---GC-------------------C-------------------AA------A
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4451810  9 -   4543643 G-T-T---GC-------------------C-------------------AA------A
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            147160  9 +    252755 A-T-T---AT-------------------T-------------------AA------A
i Manis_javanica.JSZB01003966.1                         C 0 I 9
s Manis_pentadactyla.KN017078.1                             37303  9 +     58827 A-T-T---AT-------------------T-------------------AA------A
i Manis_pentadactyla.KN017078.1                         C 0 I 9
s Marmota_marmota.CZRN01000005.1                         36874850  9 +  64221397 a-t-t---AC-------------------C-------------------AA------A
i Marmota_marmota.CZRN01000005.1                        C 0 I 9
s Mellivora_capensis.MelCap_flattened_line_15433             2122  9 -     87323 A-T-T---TC-------------------C-------------------AA------A
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 I 9
s Meriones_unguiculatus.MerUng_scaffold_52233               14475  6 +     15977 A-A-T---AC-------------------C----------------------------
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 I 5
s Mesocricetus_auratus.KB708139.1                         1048187  1 -  26018355 a---------------------------------------------------------
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_475714                    223  9 +       551 G-T-T---AT-------------------T-------------------AA------A
i Mesoplodon_bidens.MesBid_scaffold_475714              C 0 I 9
s Microcebus_murinus.CM007691.1                          16511254  9 +  47401472 A-T-T---AC-------------------T-------------------AG------A
i Microcebus_murinus.CM007691.1                         C 0 I 9
s Microgale_talazaci.MicTal_scaffold_34660                  39406  6 -     48017 --------AC-------------------T-------------------AA------A
i Microgale_talazaci.MicTal_scaffold_34660              C 0 I 9
s Micronycteris_hirsuta.MicHir_scaffold_37978               23975  6 -     32043 --------AC-------------------T-------------------GA------A
i Micronycteris_hirsuta.MicHir_scaffold_37978           I 7 I 9
s Microtus_ochrogaster.CM001673.1                        22820910  6 -  98408828 A-A-C---AC-------------------T----------------------------
i Microtus_ochrogaster.CM001673.1                       C 0 I 5
s Miniopterus_natalensis.LDJU01000022.1                   8212084  9 +  10048721 A-T-G---AC-------------------T-------------------AA------A
i Miniopterus_natalensis.LDJU01000022.1                 C 0 I 9
s Miniopterus_schreibersii.MinSch_scaffold_24116            36573  9 +     45743 A-T-G---AC-------------------T-------------------AA------A
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 I 9
s Miopithecus_ogouensis.k141_2935907                         3557  9 +     29742 G-T-T---GC-------------------C-------------------AA------A
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        12611  9 -    104932 A-T-T---TC-------------------C-------------------AA------A
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 I 9
s Mirza_zaza.k141_226143                                     6643  9 +      8497 A-T-T---AC-------------------T-------------------AG------A
i Mirza_zaza.k141_226143                                C 0 I 9
s Monodon_monoceros.MonMon_M_scaffold_5598                 147504  9 +    154973 G-T-T---AT-------------------T-------------------AA------A
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 I 9
s Mormoops_blainvillei.MorMeg_scaffold_2952                162514  7 +    265003 ----A---AC-------------------T-------------------AA------A
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 I 9
s Moschus_moschiferus.MosMos_scaffold_78805                  2596  9 -     19904 G-T-T---AC-------------------T-------------------AA------G
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 I 9
s Mungos_mungo.MunMun_flattened_line_8729                  146031  9 -    168139 A-T-T---TC-------------------T-------------------AA------A
i Mungos_mungo.MunMun_flattened_line_8729               C 0 I 9
s Murina_feae.MurFea_scaffold_2254                          23527  9 -    100666 A-T-G---AT-------------------T-------------------AC------A
i Murina_feae.MurFea_scaffold_2254                      C 0 I 9
s Muscardinus_avellanarius.MusAve_scaffold_9643             13382  8 +     98495 A-T-T---G--------------------T-------------------AA------A
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 I 9
s Mustela_putorius.JH417978.1                             4425487  9 -  28371801 A-T-T---TC-------------------C-------------------AA------A
i Mustela_putorius.JH417978.1                           C 0 I 9
s Myocastor_coypus.MyoCoy_scaffold_3653                     91495  3 -    117718 -------------------------------------------------AG------G
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 5 I 9
s Myotis_brandtii.KE161952.1                               970392  9 +   8389877 A-T-G---AT-------------------T-------------------AC------A
i Myotis_brandtii.KE161952.1                            C 0 I 9
s Myotis_davidii.KB114863.1                               5021817  9 +   6462685 A-T-G---AT-------------------T-------------------AC------A
i Myotis_davidii.KB114863.1                             C 0 I 9
s Myotis_lucifugus.GL429887.1                             3467895  9 -   3747815 A-T-G---AT-------------------T-------------------AC------A
i Myotis_lucifugus.GL429887.1                           C 0 I 9
s Myotis_myotis.MyoMyo_scaffold_6123                        13138  9 +     66751 A-T-G---AT-------------------T-------------------AC------A
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 I 9
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             6147  2 -      8794 --------------------------------------------------A------A
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 I 9
s Nasalis_larvatus.k141_153429                              10034  9 +     48152 G-T-T---GC-------------------C-------------------AA------A
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4486001  9 -  14209539 A-T-T---TC-------------------C-------------------AA------A
i Neomonachus_schauinslandi.NINY01007774.1              C 0 I 9
s Neophocaena_asiaeorientalis.KZ688543.1                  3952116  9 -   4490290 G-T-T---AT-------------------T-------------------AA------A
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 I 9
s Nomascus_annamensis.k141_224620                             631  9 -      2316 A-T-T---CC-------------------C-------------------AA------A
i Nomascus_annamensis.k141_224620                       C 0 C 0
s Nomascus_concolor.k141_226614                              2728  9 -      5092 A-T-T---GC-------------------C-------------------AA------A
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_1032971                            302  9 -      1918 A-T-T---GC-------------------C-------------------AA------A
i Nomascus_gabriellae.k141_1032971                      C 0 C 0
s Nomascus_siki_b.tarseq_80                             26480  9 -  18771707 A-T-T---GC-------------------C-------------------AA------A
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  4150  9 +      4512 A-T-T---GC-------------------C-------------------AA------A
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                32241  9 +   3668941 A-T-T---TC-------------------C-------------------AA------A
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 I 33
s Nycticebus_bengalensis.LG16                            65568113  9 -  95554990 A-T-T---AC-------------------T-------------------GG------A
i Nycticebus_bengalensis.LG16                           C 0 I 9
s Nycticebus_coucang.k141_2051882                            4839  9 +      6470 A-T-T---AC-------------------T-------------------GG------A
i Nycticebus_coucang.k141_2051882                       C 0 I 9
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65670446  9 +  89412551 A-T-T---AC-------------------T-------------------GG------A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 I 9
s Octodon_degus.JH651621.1                                3686995  3 +  10294119 -------------------------------------------------AA------G
i Octodon_degus.JH651621.1                              I 5 I 9
s Odobenus_rosmarus.KB229369.1                             680663  9 -   3126709 A-T-T---TC-------------------C-------------------AA------A
i Odobenus_rosmarus.KB229369.1                          C 0 I 9
s Odocoileus_virginianus.KZ101650.1                       1080771  9 +   1425656 G-T-T---AC-------------------T-------------------AA------G
i Odocoileus_virginianus.KZ101650.1                     C 0 I 9
s Okapia_johnstoni.LVCL01S0017931.1                         38072  9 +     78940 T-T-T---AC-------------------T-------------------AA------G
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 I 9
s Ondatra_zibethicus.OndZib_scaffold_6821                  126175  6 +    145789 G-A-C---AC-------------------T----------------------------
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 I 5
s Onychomys_torridus.OnyTor_scaffold_12578                  38355  6 +     62360 A-A-C---AC-------------------T----------------------------
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 I 5
s Orcinus_orca.KB316965.1                                 7225801  9 -   7562323 G-T-T---AT-------------------T-------------------AA------A
i Orcinus_orca.KB316965.1                               C 0 I 9
s Orycteropus_afer.OryAfe_flattened_line_13509              61034  9 -     66828 A-T-G---AC-------------------T-------------------AA------A
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 I 9
s Oryctolagus_cuniculus.CM000803.1                      141877455  9 + 163896628 G-C-T---AG-------------------T-------------------Ac------a
i Oryctolagus_cuniculus.CM000803.1                      C 0 I 9
s Otocyon_megalotis.JAEUCK010005121.1                      309536  9 -    505867 A-T-T---TC-------------------C-------------------AA------A
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 I 31
s Otolemur_crassicaudatus.k141_505435                        1752  9 -     53940 A-T-T---AC-------------------T-------------------GG------A
i Otolemur_crassicaudatus.k141_505435                   C 0 I 9
s Otolemur_garnettii.GL873528.1                          18009733  9 -  38779656 A-T-T---AC-------------------T-------------------GG------A
i Otolemur_garnettii.GL873528.1                         C 0 I 9
s Ovis_aries.CM001582.2                                 134078372  9 - 275406953 G-T-T---AC-------------------T-------------------AA------G
i Ovis_aries.CM001582.2                                 C 0 I 14
s Ovis_canadensis.OviCan_scaffold_6251                      79587  9 +    140051 G-T-T---AC-------------------T-------------------AA------G
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 I 14
s Panthera_onca.PanOnc_flattened_line_1615                  35420  9 +    295523 A-T-T---TC-------------------C-------------------AA------A
i Panthera_onca.PanOnc_flattened_line_1615              C 0 I 9
s Panthera_pardus.KV860323.1                              3639170  9 +  18214204 A-T-T---TC-------------------C-------------------AA------A
i Panthera_pardus.KV860323.1                            C 0 I 9
s Panthera_tigris.KE721879.1                              5028846  9 -   6340057 A-T-T---TC-------------------C-------------------AA------A
i Panthera_tigris.KE721879.1                            C 0 I 9
s Pantholops_hodgsonii.KE114631.1                         1067221  9 -   1292953 G-T-T---AC-------------------T-------------------AA------G
i Pantholops_hodgsonii.KE114631.1                       C 0 I 14
s Papio_anubis.CM001492.2                               188157790  9 - 188283584 G-T-T---GC-------------------C-------------------AA------A
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                               882  9 +     25005 G-T-T---GC-------------------C-------------------AA------A
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47515167  9 +  47705337 G-T-T---GC-------------------C-------------------AA------A
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 69157  9 -    104429 G-T-T---GC-------------------C-------------------AA------A
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    7686  9 +     14967 G-T-T---GC-------------------C-------------------AA------A
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 3551  9 -      7628 G-T-T---GC-------------------C-------------------AA------A
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    116908  9 -    135482 A-T-T---TC-------------------C-------------------AA------A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 I 9
s Perodicticus_ibeanus.k141_117958                           6437  9 -     23713 A-T-T---CC-------------------T-------------------GG------A
i Perodicticus_ibeanus.k141_117958                      C 0 I 9
s Perodicticus_potto.k141_713187                            25750  9 -     27972 A-T-T---CC-------------------T-------------------GG------A
i Perodicticus_potto.k141_713187                        C 0 I 9
s Petromus_typicus.PetTyp_scaffold_33007                    14719  3 -     36578 -------------------------------------------------AA------A
i Petromus_typicus.PetTyp_scaffold_33007                I 6 I 9
s Peromyscus_maniculatus.KI615518.1                       4951291  6 -   8017169 T-T-C---GC-------------------T----------------------------
i Peromyscus_maniculatus.KI615518.1                     C 0 I 5
s Phocoena_phocoena.PhoPho_flattened_line_53071               258  9 +      8220 G-T-T---AT-------------------T-------------------AA------A
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 I 9
s Piliocolobus_badius.k141_1987485                           3567  9 -      5908 G-T-T---GC-------------------C-------------------AA------A
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       4185  9 -     17985 G-T-T---GC-------------------C-------------------AA------A
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            3552  9 +      7694 G-T-T---GC-------------------C-------------------AA------A
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26742036  9 +  26888534 G-T-T---GC-------------------C-------------------AA------A
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pithecia_albicans.k141_991845                             44984  9 -     61926 A-T-T---GC-------------------C-------------------AA------A
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        26367  9 +     78826 A-T-T---GC-------------------C-------------------AA------A
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                             10415  9 -     15800 A-T-T---GC-------------------C-------------------AA------A
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        13614  9 -     16101 A-T-T---GC-------------------C-------------------AA------A
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          6843  9 +      9673 A-T-T---GC-------------------C-------------------AA------A
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13475843  9 -  19735023 A-T-T---GC-------------------C-------------------AA------A
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           14746  9 -     31692 A-T-T---GC-------------------C-------------------AA------A
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           6722  9 +     21690 G-T-T---AT-------------------T-------------------AA------A
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 I 9
s Plecturocebus_bernhardi.k141_959214                       24082  9 +     44506 A-T-T---GC-------------------C-------------------AA------A
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        24295  9 +     67491 A-T-T---GC-------------------C-------------------AA------A
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      14534  9 -     98129 A-T-T---GC-------------------C-------------------AA------A
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     24134  9 +    147771 A-T-T---GC-------------------C-------------------AA------A
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                          770  9 -     43940 A-T-T---GC-------------------C-------------------AA------A
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          4853  9 -     55515 A-T-T---GC-------------------C-------------------AA------A
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         24207  9 +    152463 A-T-T---GC-------------------C-------------------AA------A
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       1924  9 -    119457 A-T-T---GC-------------------C-------------------AA------A
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         13930  9 +    134592 A-T-T---GC-------------------C-------------------AA------A
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          24517  9 -     75465 A-T-T---GC-------------------C-------------------AA------A
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              188672  9 -    373494 A-T-T---Gc-------------------c-------------------aa------a
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19809319  9 +  19899266 A-T-T---GC-------------------C-------------------AA------A
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               7314  9 -     15069 G-T-T---GC-------------------C-------------------AA------A
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              7429  9 +     14865 G-T-T---GC-------------------C-------------------AA------A
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6849593  9 +  12164890 A-T-T---AC-------------------T-------------------AG------A
i Prolemur_simus.MPIZ01000048.1                         C 0 I 9
s Propithecus_coquerelli.NW_012147863.1                     19767  9 -     30946 n-n-n---nn-------------------n-------------------nn------n
i Propithecus_coquerelli.NW_012147863.1                 C 0 I 9
s Propithecus_coronatus.k141_1353159                         4672  9 +     11805 A-T-T---AC-------------------A-------------------AG------A
i Propithecus_coronatus.k141_1353159                    C 0 I 9
s Propithecus_diadema.k141_577245                           44020  9 +     52369 A-T-T---AC-------------------G-------------------AG------A
i Propithecus_diadema.k141_577245                       C 0 I 9
s Propithecus_edwardsi.k141_1317105                         36407  9 -     44753 A-T-T---AC-------------------G-------------------AG------A
i Propithecus_edwardsi.k141_1317105                     C 0 I 9
s Propithecus_perrieri.k141_7554                            18330  9 +     27322 A-T-T---AC-------------------G-------------------AG------A
i Propithecus_perrieri.k141_7554                        C 0 I 9
s Propithecus_tattersalli.k141_907138                       17964  9 -     53241 A-T-T---AC-------------------G-------------------AG------A
i Propithecus_tattersalli.k141_907138                   C 0 I 9
s Propithecus_verreauxi.k141_158021                         40228  9 -     48185 A-T-T---AC-------------------G-------------------AG------A
i Propithecus_verreauxi.k141_158021                     C 0 I 9
s Pteronotus_parnellii.KE867983.1                            5160 10 -     27784 ----GACGAC-------------------T-------------------AA------A
i Pteronotus_parnellii.KE867983.1                       C 0 I 9
s Pteronura_brasiliensis.PteBra_flattened_line_1343        247799  9 -    344369 A-T-T---TC-------------------C-------------------AA------A
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 I 9
s Pteropus_alecto.KB031157.1                             13247082  9 -  17261082 A-T-G---AC-------------------T-------------------GA------A
i Pteropus_alecto.KB031157.1                            C 0 I 9
s Pteropus_vampyrus.KN525959.1                             605032  9 -   3946241 A-T-G---AC-------------------T-------------------GA------A
i Pteropus_vampyrus.KN525959.1                          C 0 I 9
s Puma_concolor.QAVW01000427.1                          131535441  9 - 161321710 A-T-T---TC-------------------C-------------------AA------A
i Puma_concolor.QAVW01000427.1                          C 0 I 9
s Pygathrix_cinerea.k141_374971                             31418  9 +     56732 G-T-T---GC-------------------C-------------------AA------A
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6807912  9 +   6970761 G-T-T---GC-------------------C-------------------AA------A
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             7305  9 +     18040 G-T-T---GC-------------------C-------------------AA------A
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                16883  9 +     68503 G-T-T---AC-------------------T-------------------AA------G
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 I 9
s Rhinolophus_sinicus.LVEH01000179.1                      1788961  9 +   2252614 A-T-G---AC-------------------T-------------------AA------A
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 I 9
s Rhinopithecus_bieti.k119_554384                            1701  9 -     17045 G-T-T---GC-------------------C-------------------AA------A
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206379189  9 - 206558726 G-T-T---GC-------------------C-------------------AA------A
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44858091  9 -  45163003 G-T-T---GC-------------------C-------------------AA------A
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                20420  9 +    109198 A-T-G---AC-------------------C-------------------GA------A
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 I 9
s Saiga_tatarica.SaiTat_scaffold_82192                       9048  9 +     12214 G-T-T---AT-------------------T-------------------AA------G
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 I 14
s Saimiri_boliviensis.NW_024100938.1                     15673931  9 -  43202129 A-T-T---gc-------------------c-------------------aa------a
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        5844  9 +     34089 A-T-T---GC-------------------C-------------------AA------A
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              5786  9 -     60842 A-T-T---GC-------------------C-------------------AA------A
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              5879  9 +     67014 A-T-T---GC-------------------C-------------------AA------A
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              5857  9 +     60816 A-T-T---GC-------------------C-------------------AA------A
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 5794  9 -     76454 A-T-T---GC-------------------C-------------------AA------A
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17342526  9 -  30362882 A-C-T---GC-------------------C-------------------AA------A
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         21887  9 -     62485 A-C-T---GC-------------------C-------------------AA------A
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   37797  9 -    114521 A-T-T---AC-------------------T-------------------AA------A
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 I 20
s Semnopithecus_entellus.k141_1572367                        4921  9 +     15331 G-T-T---GC-------------------C-------------------AA------A
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      10296  9 +     20762 G-T-T---GC-------------------C-------------------AA------A
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         120301  9 +    130994 G-T-T---GC-------------------C-------------------AA------A
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           39080  9 +     46263 G-T-T---GC-------------------C-------------------AA------A
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     32225  9 +     42640 G-T-T---GC-------------------C-------------------AA------A
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        15247  9 +     30600 G-T-T---GC-------------------C-------------------AA------A
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  101522  6 -    120886 T-A-C---AC-------------------T----------------------------
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 I 5
s Solenodon_paradoxus.SolPar_flattened_line_1012            19995  9 +    739146 A-T-T---AT-------------------T-------------------AA------A
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 I 7
s Sorex_araneus.JH798170.1                               17767551  9 -  27805282 A-T-T---AC-------------------T-------------------AA------A
i Sorex_araneus.JH798170.1                              C 0 I 7
s Spermophilus_dauricus.KZ294190.1                        2240859  9 +   2842873 A-T-T---AC-------------------C-------------------AA------A
i Spermophilus_dauricus.KZ294190.1                      C 0 I 9
s Spilogale_gracilis.SpiGra_flattened_line_905             236174  9 -    276980 A-T-T---TC-------------------C-------------------AA------A
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 I 9
s Suricata_suricatta.SurSur_flattened_line_20339            28690  9 +     62062 A-T-T---TC-------------------T-------------------AA------A
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 I 9
s Sus_scrofa.CM000824.4                                 189273192  9 + 218635234 G-T-T---AC-------------------T-------------------AA------A
i Sus_scrofa.CM000824.4                                 C 0 I 9
s Symphalangus_syndactylus.tarseq_24                        16424  9 -  13920577 A-T-T---GC-------------------C-------------------AA------A
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                1390  9 +     20549 A-T-G---AC-------------------T-------------------AA------A
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 I 9
s Tamandua_tetradactyla.TamTet_scaffold_26877               15813  2 +     45698 --------------------------------------------------A------A
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 I 9
s Tapirus_indicus.TapInd_scaffold_176                      808241  9 +   1148477 A-T-T---AC-------------------T-------------------AA------A
i Tapirus_indicus.TapInd_scaffold_176                   C 0 I 9
s Tapirus_terrestris.TapTer_scaffold_14939                  58954  9 +     99546 A-T-T---AC-------------------T-------------------AA------A
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 I 9
s Theropithecus_gelada.CM009951.1                       194009318  9 - 194193292 G-T-T---GC-------------------C-------------------AA------A
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             40076  3 -     47444 -------------------------------------------------AA------G
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         I 6 I 9
s Tolypeutes_matacus.TolMat_scaffold_1305119                    3  2 -       594 --------------------------------------------------A------A
i Tolypeutes_matacus.TolMat_scaffold_1305119            C 0 I 9
s Tonatia_saurophila.TonSau_scaffold_3334                  137136  9 -    259118 A-T-G---AC-------------------T-------------------GA------A
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 I 9
s Trachypithecus_auratus.k141_738098                        28568  9 +     38948 G-T-T---GC-------------------C-------------------AA------A
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   22128  9 -     32910 G-T-T---GC-------------------C-------------------AA------A
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      4029  9 -     12939 G-T-T---GC-------------------C-------------------AA------A
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       3457  9 -     14244 G-T-T---GC-------------------C-------------------AA------A
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           44855  9 -     54611 G-T-T---GC-------------------C-------------------AA------A
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        2651  9 -     11566 G-T-T---GC-------------------C-------------------AA------A
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     4835  9 -     15592 G-T-T---GC-------------------C-------------------AA------A
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          3487  9 +     14371 G-T-T---GC-------------------C-------------------AA------A
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   1773  9 +     12481 G-T-T---GC-------------------C-------------------AA------A
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        1754  9 -     24393 G-T-T---GC-------------------C-------------------AA------A
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       6898  9 -     28054 G-T-T---GC-------------------C-------------------AA------A
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44661682  9 -  44834318 G-T-T---GC-------------------C-------------------AA------A
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       3999  9 +     13828 G-T-T---GC-------------------C-------------------AA------A
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   6237  9 +     90398 A-T-T---AC-------------------T-------------------AA------A
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 I 9
s Trichechus_manatus.JH594618.1                          16086934  6 +  31416278 --------AC-------------------T-------------------AA------A
i Trichechus_manatus.JH594618.1                         I 3 I 9
s Tupaia_chinensis.KB320831.1                             2794562  9 -   3938065 A-T-G---AC-------------------T-------------------AA------A
i Tupaia_chinensis.KB320831.1                           C 0 I 9
s Tupaia_tana.TupTan_flattened_line_68454                    6666  9 +     13056 A-T-T---AC-------------------T-------------------AA------A
i Tupaia_tana.TupTan_flattened_line_68454               C 0 I 9
s Tursiops_truncatus.MRVK01000923.1                      69314517  9 -  96451834 G-T-T---AT-------------------T-------------------AA------A
i Tursiops_truncatus.MRVK01000923.1                     C 0 I 9
s Uropsilus_gracilis.UroGra_scaffold_69449                   8364  9 +     10241 A-T-T---AC-------------------T-------------------AA------A
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 I 21
s Ursus_maritimus.KK498671.1                              6515919  9 +  28682327 A-T-T---TC-------------------C-------------------AA------A
i Ursus_maritimus.KK498671.1                            C 0 I 9
s Varecia_rubra.k141_432109                                  6228  9 -     20643 A-T-T---AC-------------------T-------------------AG------A
i Varecia_rubra.k141_432109                             C 0 I 9
s Varecia_variegata.k141_775891                             25763  9 -     33872 A-T-T---AC-------------------T-------------------AG------A
i Varecia_variegata.k141_775891                         C 0 I 9
s Vicugna_pacos.KN269600.1                                1525733  8 -   2331223 --T-T---AC-------------------T-------------------AA------A
i Vicugna_pacos.KN269600.1                              C 0 I 9
s Vulpes_lagopus.VulLag_flattened_line_2045                139636  9 -    281493 T-T-T---TC-------------------C-------------------AA------A
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 I 33
s Xerus_inauris.XerIna_scaffold_7898                       127977  9 -    134049 A-T-T---AC-------------------C-------------------AA------A
i Xerus_inauris.XerIna_scaffold_7898                    C 0 I 9
s Zalophus_californianus.ZalCal_flattened_line_4097        215390  8 -    227762 A-T-T----G-------------------C-------------------AA------A
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 I 9
s Zapus_hudsonius.ZapHud_scaffold_64392                     16924  6 -     20485 A-A-G---AG-------------------T----------------------------
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 I 19
s Ziphius_cavirostris.ZipCav_flattened_line_127025           8009  9 -      8775 G-T-T---AT-------------------T-------------------AA------A
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 I 9
e Ochotona_princeps.JH802095.1                            4996729 2205 -  23139505 I
e Perognathus_longimembris.PerPac_flattened_line_19359        892 695 +     49596 I
e Dipodomys_ordii.KN672545.1                              3657363 894 +   4240102 I
e Procavia_capensis.ProCapCap_scaffold_149274                2467 1156 -      9567 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Megaderma_lyra.MegLyr_scaffold_3562                       64783 239 -    234502 I
e Heterohyrax_brucei.HetBruBak_scaffold_25354               61360 1157 +     73687 I
e Echinops_telfairi.JH980316.1                           22999931  2 -  44670279 I
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1008 325 -      5782 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19677 266 -    119109 I
e Tarsius_wallacei.k141_48636                               60532 3805 +     65473 I
e Tarsius_lariang.k141_609102                               27216 3812 +     42269 I
e Rattus_norvegicus.chr11                                13915860 1475 +  90463843 I
e Psammomys_obesus.NESX01026517.1                           36530 59 +     77221 I
e Nannospalax_galili.KL201303.1                            119252 614 +    362372 I
e Mus_spretus.CM004110.1                                 74333573 2703 +  97876770 I
e Mus_pahari.LT608305.1                                  67557037 2889 +  89017189 I
e Mus_musculus.chr16                                     75490838 2711 +  98207768 I
e Mus_caroli.LT608236.1                                  70767758 3738 +  92629107 I
e Dolichotis_patagonum.DolPat_scaffold_14102                36772 276 -     73477 I
e Dasyprocta_punctata.DasPun_flattened_line_634             59553 276 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                18462 277 +     26546 I
e Cephalopachus_bancanus.k141_702587                         8788 3391 +     21754 I
e Cavia_tschudii.CavTsc_scaffold_488                       177453 271 +    436027 I
e Cavia_porcellus.DS562889.1                             15799262 290 -  24440124 I
e Cavia_aperea.AVPZ01000278.1                            15787326 288 -  24422027 I
e Carlito_syrichta.NW_007248099.1                          309764 3411 +    345090 I
e Pan_paniscus.CM003386.1                               127575888 480 - 205426864 I
e Pan_troglodytes.CM009241.2                            120153042 480 - 196562556 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               15082 11 +    209709 AATCA---------------------A---------T----CAA-------------------A
s Acinonyx_jubatus.LLWD01000356.1                         2035099 13 +   3721120 GACCA---------------------A---------T--GACAT-------------------A
i Acinonyx_jubatus.LLWD01000356.1                       I 9 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    114948 21 -    189883 -----------------------------------------A--CTTGATAAAAGTAAAGCAGG
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 8 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10658666 13 +  23371972 GACCA---------------------a---------tga--tat-------------------a
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 9 C 0
s Ailurus_fulgens.LNAC01000003.1                          7095800 13 -  16596857 GACCA---------------------A---------T--GACAT-------------------A
i Ailurus_fulgens.LNAC01000003.1                        I 9 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   19333 13 -     22067 aacta---------------------a---------taaaaa---------------------a
i Allactaga_bullata.AllBul_scaffold_70162               I 630 C 0
s Allenopithecus_nigroviridis.k141_2469532                   2809 11 -     60446 GATCA---------------------A---------T----GAA-------------------A
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         3526 11 -     29318 GATTA---------------------A---------T----GAA-------------------A
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         2462 11 +     38766 GATTA---------------------A---------T----GAA-------------------A
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          3420 11 -     80423 GATTA---------------------A---------T----GAA-------------------A
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            11407 11 -     18050 GATAA---------------------A---------T----AAA-------------------A
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_1710068                               1123 11 +      1555 GATAA---------------------A---------T----AAA-------------------A
i Alouatta_caraya.k141_1710068                          C 0 C 0
s Alouatta_discolor.k141_811576                             12080 11 -     21359 GATAA---------------------A---------T----AAA-------------------A
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                1703 11 +      2129 GATAA---------------------A---------T----AAA-------------------A
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_2177643                          1080 11 -      1868 GATAA---------------------A---------T----AAA-------------------A
i Alouatta_macconnelli.k141_2177643                     C 0 C 0
s Alouatta_nigerrima.k141_3537692                            1129 11 +      1660 GATAA---------------------A---------T----AAA-------------------A
i Alouatta_nigerrima.k141_3537692                       C 0 C 0
s Alouatta_palliata.k141_2764429                             1049 11 -      1480 GATAA---------------------A---------T----AAA-------------------A
i Alouatta_palliata.k141_2764429                        C 0 C 0
s Alouatta_puruensis.k141_131505                              336 11 +      4855 GATAA---------------------A---------T----AAA-------------------A
i Alouatta_puruensis.k141_131505                        C 0 C 0
s Alouatta_seniculus.k141_1531728                            1264 11 -      1692 GATAA---------------------A---------T----AAA-------------------A
i Alouatta_seniculus.k141_1531728                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3521244  7 +   4113121 ------------------------------------T----GAA---G-T-------------a
i Ammotragus_lervia.NIVO01013474.1                      I 14 I 285
s Anoura_caudifer.AnoCau_scaffold_422                      391612 11 -    631301 GACCC---------------------A---------T----GAA-------------------A
i Anoura_caudifer.AnoCau_scaffold_422                   I 9 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            31824 13 +     33004 GACTA---------------------A---------T----GAA---G-T-------------A
i Antilocapra_americana.AntAmePen_scaffold_42841        I 9 I 283
s Aotus_azarae.k141_3170768                                 63752 10 +     78111 GATAA---------------------A---------T----AAA--------------------
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            6695 10 +     22701 GATAA---------------------A---------T----AAA--------------------
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5750652 10 +   9889416 gataa---------------------a---------t----aaa--------------------
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             7241 10 -    104377 GATAA---------------------A---------T----AAA--------------------
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               7243 10 +     23246 GATAA---------------------A---------T----AAA--------------------
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_231055                     1131 13 -      2492 AATCA---------------------G---------TGAAAT---------------------A
i Aplodontia_rufa.AprRuf_scaffold_231055                I 9 C 0
s Arctocebus_calabarensis.k141_587554                        2049 11 +      9265 GATCT---------------------A---------T----AAA-------------------A
i Arctocebus_calabarensis.k141_587554                   I 9 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                10029 11 -     29036 GACCC---------------------A---------T----GAA-------------------A
i Artibeus_jamaicensis.ArtJam_scaffold_41619            I 9 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9540516 11 +  39197703 GATAA---------------------A---------C----AAA-------------------A
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             61789 11 +     85812 GATAA---------------------A---------C----AAA-------------------A
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                12802 11 +     89302 GATAA---------------------A---------C----AAA-------------------A
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             17303 11 -     58268 GATAA---------------------A---------C----AAA-------------------A
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             65297 11 +    119057 GATAA---------------------A---------C----AAA-------------------A
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               7266 11 -     25888 GATAA---------------------A---------C----AAA-------------------A
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 7782 11 -     16375 GATCT---------------------A---------T----AAA-------------------A
i Avahi_laniger.k141_2840928                            I 9 C 0
s Avahi_peyrierasi.k141_798820                               1398 11 +      6337 GATCT---------------------A---------T----AAA-------------------A
i Avahi_peyrierasi.k141_798820                          I 9 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26381304 13 +  51448160 GACCA---------------------A---------A----GAa-----------------gta
i Balaenoptera_acutorostrata.KI537095.1                 I 9 C 0
s Balaenoptera_bonaerensis.DF502048.1                        6476 13 -     13118 GACCA---------------------A---------A----GAa-----------------gta
i Balaenoptera_bonaerensis.DF502048.1                   I 9 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   44350  7 -     72089 ------------------------------------T----GAA---G-T-------------A
i Beatragus_hunteri.BeaHun_scaffold_21644               I 14 I 285
s Bison_bison.KN264915.1                                  6560972 13 +   6870073 GACTA---------------------A---------T----AAA---G--------------ta
i Bison_bison.KN264915.1                                I 9 I 278
s Bos_indicus.CM003021.1                                138141087 13 - 161108492 GACTA---------------------A---------T----AAA---G--------------ta
i Bos_indicus.CM003021.1                                I 9 I 285
s Bos_mutus.JH883513.1                                     573624 13 -    998990 GACTA---------------------A---------T----AAA---G--------------ta
i Bos_mutus.JH883513.1                                  I 9 I 278
s Bos_taurus.CM000177.6                                 136296820 13 - 158972876 GACTA---------------------A---------T----AAA---G--------------ta
i Bos_taurus.CM000177.6                                 I 9 I 285
s Bubalus_bubalis.KI419065.1                              1233901 13 -   1914593 GACTA---------------------C---------T----AAA---G--------------ta
i Bubalus_bubalis.KI419065.1                            I 9 I 285
s Cacajao_ayresi.k141_724503                               115155  3 -    171031 GAT-------------------------------------------------------------
i Cacajao_ayresi.k141_724503                            C 0 I 2
s Cacajao_calvus.k141_96166                                 14184  3 +    125063 GAT-------------------------------------------------------------
i Cacajao_calvus.k141_96166                             C 0 I 2
s Cacajao_hosomi.k141_303789                                16227  3 -    216513 GAT-------------------------------------------------------------
i Cacajao_hosomi.k141_303789                            C 0 I 2
s Cacajao_melanocephalus.k141_1160263                        8770  3 -    134917 GAT-------------------------------------------------------------
i Cacajao_melanocephalus.k141_1160263                   C 0 I 2
s Camelus_bactrianus.KN276303.1                           3220645 13 -   8989139 GActa---------------------a---------t----gaa-----------------atg
i Camelus_bactrianus.KN276303.1                         I 9 C 0
s Camelus_dromedarius.KN271192.1                           398346 13 -  15254737 GActa---------------------a---------t----gaa-----------------atg
i Camelus_dromedarius.KN271192.1                        I 9 C 0
s Camelus_ferus.KB016973.1                                2974082 13 +   6889770 GActa---------------------a---------t----gaa-----------------atg
i Camelus_ferus.KB016973.1                              I 9 C 0
s CanFam4.chr31                                          11520841 13 +  39901454 GACCA---------------------A---------T--GATAT-------------------A
i CanFam4.chr31                                         I 33 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   15866 13 +     87036 GACCA---------------------A---------T--GATAT-------------------A
i Canis_lupus_VD.CanFam_VD_scaffold_16982               I 33 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11267510 13 -  35597290 GACCA---------------------A---------T--GATAT-------------------A
i Canis_lupus_dingo.QKWQ01001993.1                      I 33 C 0
s Canis_lupus_familiaris.chr31                           11090043 13 +  39895921 GACCA---------------------A---------T--GATAT-------------------A
i Canis_lupus_familiaris.chr31                          I 33 C 0
s Canis_lupus_orion.HG994411.1                           16457056 13 -  44759192 GACCA---------------------A---------T--GATAT-------------------A
i Canis_lupus_orion.HG994411.1                          I 33 C 0
s Capra_aegagrus.CM003214.1                              21326315  7 + 157394656 ------------------------------------T----GAA---G-T-------------a
i Capra_aegagrus.CM003214.1                             I 14 I 285
s Capra_hircus.CM004562.1                               135707543  7 - 157403528 ------------------------------------T----GAA---G-T-------------a
i Capra_hircus.CM004562.1                               I 14 I 285
s Carollia_perspicillata.CarPer_scaffold_4436               60816 11 +     67245 GACCC---------------------A---------T----GAA-------------------A
i Carollia_perspicillata.CarPer_scaffold_4436           I 9 C 0
s Castor_canadensis.CasCan_scaffold_47037                   32211 13 +     33760 GATCA---------------------A---------TGAAAT---------------------G
i Castor_canadensis.CasCan_scaffold_47037               I 12 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   160254 11 -    276539 GACCA---------------------A---------C----GAA-------------------A
i Catagonus_wagneri.CatWag_scaffold_1305                I 295 C 0
s Cebus_albifrons.Contig22                               18891990 11 -  29618158 GATAA---------------------A---------T----AAA-------------------A
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 9534 11 -     26817 GATAA---------------------A---------T----AAA-------------------A
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                13777 11 +     25043 GATAA---------------------A---------T----AAA-------------------A
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4365019 13 +   7569818 GGCCA---------------------G---------T----GAACT-----------------A
i Ceratotherium_simum.JH767818.1                        I 9 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         4776 13 -      9338 GGCCA---------------------G---------T----GAACT-----------------A
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    I 9 C 0
s Cercocebus_atys.KQ010443.1                              6556756 11 +   6739814 GATca---------------------a---------t----gaa-------------------a
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      28230 11 +     60454 GATCA---------------------A---------T----GAA-------------------A
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          3437 11 -     21101 GATCA---------------------A---------T----GAA-------------------A
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         60747 11 -    107033 GATCA---------------------A---------T----GAA-------------------A
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        3626 11 -     17608 GATCA---------------------A---------T----GAA-------------------A
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                           785 11 +     45019 GATCA---------------------A---------T----GAA-------------------A
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                            869 11 +     15177 GATCA---------------------A---------T----GAA-------------------A
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          3669 11 +     16677 GATCA---------------------A---------T----GAA-------------------G
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           25839 11 +     35983 GATCA---------------------A---------T----GAA-------------------A
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11992367 11 +  12117833 GATCA---------------------A---------T----GAA-------------------A
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46479125 11 +  46592721 GATCA---------------------A---------T----GAA-------------------A
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      42679 11 -     45581 GATCA---------------------A---------T----GAA-------------------A
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       3681 11 +     35577 GATCA---------------------A---------T----GAA-------------------A
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        3454 11 -     25661 GATCA---------------------A---------T----GAA-------------------A
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        3433 11 -     17744 GATCA---------------------A---------T----GAA-------------------A
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        23039 11 +     37128 GATCA---------------------A---------T----GAA-------------------A
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           3859 11 -      6963 GGCCA---------------------G---------T----GAT-------------------T
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      I 9 I 2
s Cheirogaleus_major.k141_1157592                           60053 11 -     68416 GATCT---------------------A---------T----AAA-------------------A
i Cheirogaleus_major.k141_1157592                       I 9 C 0
s Cheirogaleus_medius.k141_133808                            9105 11 +     13308 GATCT---------------------A---------T----AAA-------------------A
i Cheirogaleus_medius.k141_133808                       I 9 C 0
s Cheracebus_lucifer.k141_619653                             6812  8 -     18223 GATAA---------------------A---------T----A----------------------
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             23830  8 +     25473 GATAA---------------------A---------T----A----------------------
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           42870  8 +     57117 GATAA---------------------A---------T----A----------------------
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          47549  8 +     54541 GATAA---------------------A---------T----A----------------------
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15962825  9 +  43084221 GGTCA---------------------A---------A----C---------------------A
i Chinchilla_lanigera.JH721867.1                        I 9 C 0
s Chiropotes_israelita.k141_1189915                         72356  3 +    196370 GAT-------------------------------------------------------------
i Chiropotes_israelita.k141_1189915                     C 0 I 2
s Chiropotes_sagulatus.k141_773804                          16536  3 +     40510 GAT-------------------------------------------------------------
i Chiropotes_sagulatus.k141_773804                      C 0 I 2
s Chlorocebus_aethiops.ctg22                             15141036 11 -  15256731 GATTT---------------------A---------T----GAA-------------------A
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      35645 11 -     53260 GATTA---------------------A---------T----GAA-------------------A
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101146204 11 + 101219884 GATta---------------------a---------t----gaa-------------------a
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                17619 11 -     21363 GACCA---------------------A---------T----GAA-------------------A
i Choloepus_didactylus.ChoDid_scaffold_36182            I 9 I 2
s Choloepus_hoffmanni.KN194586.1                           762924 11 +    964067 GACCA---------------------A---------T----GAA-------------------A
i Choloepus_hoffmanni.KN194586.1                        I 9 I 2
s Colobus_angolensis.KN985967.1                          10888196 11 +  10971483 GATCA---------------------A---------T----GAA-------------------A
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147666124 11 + 156195979 GATCA---------------------A---------T----GAA-------------------A
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            18107 11 +     23629 GATCA---------------------A---------T----GAA-------------------A
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 279481  2 -    399297 -----------------------------------------T---------------------G
i Cricetomys_gambianus.CriGam_scaffold_949              I 18 C 0
s Cricetulus_griseus.LT883672.1                          53031590  1 +  72327488 -----------------------------------------A----------------------
i Cricetulus_griseus.LT883672.1                         I 6 I 2
s Cryptoprocta_ferox.CryFer_flattened_line_19014            53155 13 -     70449 GACCA---------------------A---------T--GACAT-------------------G
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 9 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 32181  9 -     67205 GATCA---------------------A---------T----C---------------------A
i Ctenomys_sociabilis.CteSoc_scaffold_19489             I 9 C 0
s Dasypus_novemcinctus.JH568778.1                          184707 32 -   6883506 Gatcatgtttaaaataaaacattttaa---------a----taa-------------------g
i Dasypus_novemcinctus.JH568778.1                       I 9 I 2
s Daubentonia_madagascariensis.ctg11                     16845918 11 +  31942871 GATCT---------------------A---------T----AAG-------------------A
i Daubentonia_madagascariensis.ctg11                    I 9 C 0
s Delphinapterus_leucas.KZ290064.1                       80037932 13 -  96802777 GACCA---------------------A---------t----gaa-----------------gta
i Delphinapterus_leucas.KZ290064.1                      I 9 C 0
s Desmodus_rotundus.KZ672188.1                           18700107 11 -  18957592 GACCa---------------------g---------t----gaa-------------------a
i Desmodus_rotundus.KZ672188.1                          I 9 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 323671 13 +    993696 GGCCA---------------------G---------T----GAACT-----------------A
i Dicerorhinus_sumatrensis.PEKH010003161.1              I 9 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   4323 13 +    151128 GGCCA---------------------G---------T----GAACT-----------------A
i Diceros_bicornis.DicBicMic_scaffold_9545              I 9 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   158024  9 +    228994 GATCA---------------------A---------T----C---------------------A
i Dinomys_branickii.DinBra_scaffold_1996                I 9 C 0
s Eidolon_helvum.KE772537.1                                 13380 11 +     24177 GAcca---------------------a---------t----gaa-------------------a
i Eidolon_helvum.KE772537.1                             I 9 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1492571 13 +   1727528 GACTA---------------------A---------T----GAA---G--------------ta
i Elaphurus_davidianus.JRFZ01086400.1                   I 9 I 284
s Elephantulus_edwardii.JH947210.1                        7829819 11 +  15467074 AAACA---------------------A---------T----GAA-------------------G
i Elephantulus_edwardii.JH947210.1                      I 9 I 2
s Ellobius_lutescens.LOEQ01003611.1                        240562  2 -    369425 -----------------------------------------T---------------------G
i Ellobius_lutescens.LOEQ01003611.1                     I 5 C 0
s Ellobius_talpinus.LOJH01090055.1                           7732  2 -      7838 -----------------------------------------T---------------------G
i Ellobius_talpinus.LOJH01090055.1                      I 5 C 0
s Enhydra_lutris.KZ291749.1                              85873241 13 +  99434291 GACCA---------------------a---------tga--tat-------------------a
i Enhydra_lutris.KZ291749.1                             I 9 C 0
s Eptesicus_fuscus.JH977687.1                             4708070 11 +   6522550 AAACa---------------------g---------t----gaa-------------------a
i Eptesicus_fuscus.JH977687.1                           I 9 C 0
s Equus_asinus.JREZ01000062.1                             5854309 13 -   7175178 CGCca---------------------a---------t----gaa-----------------ata
i Equus_asinus.JREZ01000062.1                           I 9 C 0
s Equus_caballus.CM000402.2                              13352809 13 +  41866177 CGCca---------------------a---------t----gaa-----------------ata
i Equus_caballus.CM000402.2                             I 9 C 0
s Equus_przewalskii.ATBW01073585.1                          14299 13 +     92910 CGCca---------------------a---------t----gaa-----------------ata
i Equus_przewalskii.ATBW01073585.1                      I 9 C 0
s Erythrocebus_patas.Contig8                             48778215 11 -  48907691 GATTA---------------------A---------T----GAA-------------------A
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          316144 13 +    330699 GACCA---------------------A---------A----GAA---G-T-------------A
i Eschrichtius_robustus.EscRob_flattened_line_685       I 9 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             62600 13 +     89355 GACCA---------------------A---------A----GAA---G-T-------------A
i Eubalaena_japonica.EubJap_flattened_line_7756         I 9 C 0
s Eulemur_albifrons.k141_715837                              6092 11 +     13586 GATCT---------------------A---------T----AAA-------------------T
i Eulemur_albifrons.k141_715837                         I 9 C 0
s Eulemur_collaris.k141_311830                               6024 11 -      6809 GATCT---------------------A---------T----AAA-------------------T
i Eulemur_collaris.k141_311830                          I 9 C 0
s Eulemur_coronatus.k141_3240342                            12498 11 +     36558 GATCT---------------------A---------T----AAA-------------------T
i Eulemur_coronatus.k141_3240342                        I 9 C 0
s Eulemur_flavifrons.k141_903901                             8815 11 +     60246 GATCT---------------------A---------T----AAA-------------------T
i Eulemur_flavifrons.k141_903901                        I 9 C 0
s Eulemur_fulvus.k141_653297                                12297 11 +    109717 GATCT---------------------A---------T----AAA-------------------T
i Eulemur_fulvus.k141_653297                            I 9 C 0
s Eulemur_macaco.k141_747087                                  282 11 -     19505 GATCT---------------------A---------T----AAA-------------------T
i Eulemur_macaco.k141_747087                            I 9 C 0
s Eulemur_mongoz.k141_825972                                16957 11 +     27497 GATCT---------------------A---------T----AAA-------------------T
i Eulemur_mongoz.k141_825972                            I 9 C 0
s Eulemur_rubriventer.k141_411740                           19413 11 +     26808 GATCT---------------------A---------T----AAA-------------------T
i Eulemur_rubriventer.k141_411740                       I 9 C 0
s Eulemur_rufus.k141_1620292                                34151 11 +     46535 GATCT---------------------A---------T----AAA-------------------T
i Eulemur_rufus.k141_1620292                            I 9 C 0
s Eulemur_sanfordi.k141_186399                              16877 11 -     29447 GATCT---------------------A---------T----AAA-------------------T
i Eulemur_sanfordi.k141_186399                          I 9 C 0
s Felis_catus.CM001386.2                                129894071 13 - 159252932 GACCA---------------------A---------T--GACAT-------------------A
i Felis_catus.CM001386.2                                I 9 C 0
s Felis_catus_fca126.CM031420.1                         129281155 13 - 158578461 GACCA---------------------A---------T--GACAT-------------------A
i Felis_catus_fca126.CM031420.1                         I 9 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 22295 13 +     52776 gacca---------------------a---------t--GACAT-------------------A
i Felis_nigripes.FelNig_flattened_line_8080             I 9 C 0
s Fukomys_damarensis.KN123630.1                          13892488  7 -  19261668 --tca---------------------a---------t----c---------------------a
i Fukomys_damarensis.KN123630.1                         I 6 C 0
s Galago_moholi.ctg555                                     211955 11 -    847004 GATCT---------------------A---------T----AAA-------------------A
i Galago_moholi.ctg555                                  I 9 C 0
s Galago_senegalensis.k141_964197                           14326 11 -     43889 GATCT---------------------A---------T----AAA-------------------A
i Galago_senegalensis.k141_964197                       I 9 C 0
s Galagoides_demidoff.k141_1769638                          11395 11 +     27357 GATCT---------------------A---------T----AAA-------------------A
i Galagoides_demidoff.k141_1769638                      I 9 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               157421 11 +    324696 GATCA---------------------A---------T----AAA-------------------A
i Galeopterus_variegatus.GalVar_scaffold_354            I 9 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    182364 13 -    189561 GACTA---------------------A---------T----GAT---G-T-------------A
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 9 I 285
s Glis_glis.GliGli_scaffold_79770                           14889 13 -     18683 GAGCA---------------------G---------TAAAAT---------------------A
i Glis_glis.GliGli_scaffold_79770                       I 9 C 0
s Gorilla_beringei.k141_111300                               6796 11 -     14630 AATCA---------------------A---------T----GAA-------------------A
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119653896 11 - 195582420 aatca---------------------a---------t----gaa-------------------a
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   78303 13 +    118900 GAACA---------------------T---------TGAAAT---------------------A
i Graphiurus_murinus.GraMur_scaffold_4493               I 9 C 0
s Hapalemur_alaotrensis.k141_1280836                         2882 11 +     10286 GATCT---------------------A---------T----AAA-------------------T
i Hapalemur_alaotrensis.k141_1280836                    I 9 C 0
s Hapalemur_gilberti.k141_279011                             1362 11 -     11661 GATCT---------------------A---------T----AAA-------------------T
i Hapalemur_gilberti.k141_279011                        I 9 C 0
s Hapalemur_griseus.k141_1387522                             6688 11 +     56096 GATCT---------------------A---------T----AAA-------------------T
i Hapalemur_griseus.k141_1387522                        I 9 C 0
s Hapalemur_meridionalis.k141_186231                        29937 11 -     42470 GATCT---------------------A---------T----AAA-------------------T
i Hapalemur_meridionalis.k141_186231                    I 9 C 0
s Hapalemur_occidentalis.k141_797938                        46565 11 -     54384 GATCT---------------------A---------T----AAA-------------------T
i Hapalemur_occidentalis.k141_797938                    I 9 C 0
s Helogale_parvula.HelPar_flattened_line_22962              18350 13 +     53719 GACCA---------------------A---------A--GACAT-------------------A
i Helogale_parvula.HelPar_flattened_line_22962          I 9 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                28604  7 -     91191 ------------------------------------T----GAA---G-T-------------A
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 14 I 284
s Heterocephalus_glaber.JH602058.1                        2552206  9 +  31725842 gatca---------------------a---------t----c---------------------a
i Heterocephalus_glaber.JH602058.1                      I 9 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              148225 13 +    277961 GACTA---------------------A---------T----GAA----AT-------------A
i Hippopotamus_amphibius.HipAmp_scaffold_1308           I 9 C 0
s Hipposideros_armiger.JXIK01001085.1                      279513 11 -    477199 GACCA---------------------G---------T----GAA-------------------A
i Hipposideros_armiger.JXIK01001085.1                   I 9 C 0
s Hipposideros_galeritus.HipGal_scaffold_345408               510 11 -       919 GACCA---------------------G---------T----GAA-------------------A
i Hipposideros_galeritus.HipGal_scaffold_345408         I 9 C 0
s Hoolock_leuconedys.ctg79                                      6486 11 -   7690867 GATCA---------------------A---------T----GAA-------------------A
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 18421 13 -     67322 GACCG---------------------A---------T--GACAT-------------------A
i Hyaena_hyaena.HyaHya_flattened_line_20729             I 9 C 0
s Hylobates_abbotti.k141_164775                              1269 11 -      2073 GATCA---------------------A---------T----GAA-------------------A
i Hylobates_abbotti.k141_164775                         C 0 C 0
s Hylobates_agilis.k141_1362131                               278 11 +      1075 GATCA---------------------A---------T----GAA-------------------A
i Hylobates_agilis.k141_1362131                         C 0 C 0
s Hylobates_klossii.k141_285563                              1003 11 +      1026 GATCA---------------------A---------T----GAA-------------------A
i Hylobates_klossii.k141_285563                         I 11 n 11
s Hylobates_pileatus_b.ContigUN                                 14626174 11 -  25970782 GATCA---------------------A---------T----GAA-------------------A
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_950183                              870 11 +      2027 GATCA---------------------A---------T----GAA-------------------A
i Hylobates_muelleri.k141_950183                        C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             35334 11 -     60944 GATCA---------------------A---------T----GAA-------------------A
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     7283  9 +     22540 GGTCA---------------------A---------T----T---------------------A
i Hystrix_cristata.HysCri_scaffold_50788                I 13 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7126961 13 +  13083262 AATCT---------------------G---------TGAAAT---------------------G
i Ictidomys_tridecemlineatus.JH393315.1                 I 9 I 1
s Indri_indri.k141_5141390                                   1415 11 -      3181 GATCT---------------------G---------T----AAA-------------------A
i Indri_indri.k141_5141390                              I 9 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              10138 13 +     17520 GACCA---------------------A---------T----GAA---G-T-------------A
i Inia_geoffrensis.IniGeo_flattened_line_66725          I 9 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               24740 13 +     37189 GACCA---------------------A---------T----GAA---G-T-------------A
i Kogia_breviceps.KogBre_flattened_line_35920           I 9 C 0
s Lagothrix_lagothricha.k141_12968                          51387 11 -    147782 GATAA---------------------A---------C----AAA-------------------A
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    4740 11 +     26176 GAACA---------------------G---------T----GAA-------------------A
i Lasiurus_borealis.LasBor_scaffold_59542               I 9 C 0
s Lemur_catta.scaffold_1                                258408240 11 - 285822530 GATCT---------------------A---------T----AAA-------------------T
i Lemur_catta.scaffold_1                                I 9 C 0
s Lepilemur_ankaranensis.k141_884009                        24991 11 +     39228 GATCT---------------------A---------T----AAA-------------------A
i Lepilemur_ankaranensis.k141_884009                    I 9 C 0
s Lepilemur_dorsalis.k141_134267                            54377 11 +     63517 GATCT---------------------A---------T----AAA-------------------A
i Lepilemur_dorsalis.k141_134267                        I 9 C 0
s Lepilemur_ruficaudatus.k141_617879                        79639 11 +    116806 GATCT---------------------A---------T----AAA-------------------A
i Lepilemur_ruficaudatus.k141_617879                    I 9 C 0
s Lepilemur_septentrionalis.k141_578524                     32630 11 -     33031 GATCT---------------------A---------T----AAA-------------------A
i Lepilemur_septentrionalis.k141_578524                 I 9 C 0
s Leptonychotes_weddellii.KB714749.1                      3087102 13 -   3498232 GACCA---------------------A---------T--GATAT-------------------A
i Leptonychotes_weddellii.KB714749.1                    I 9 C 0
s Lepus_americanus.LepAme_scaffold_62849                    14435 11 +     22452 TATCA---------------------A---------T----GAA-------------------A
i Lepus_americanus.LepAme_scaffold_62849                I 9 C 0
s Lipotes_vexillifer.KE558548.1                            137094 13 +   3060487 GACCA---------------------A---------t----gaa-----------------gta
i Lipotes_vexillifer.KE558548.1                         I 9 C 0
s Lophocebus_aterrimus.ctg55                             19249833 11 +  19376315 GATCA---------------------A---------T----GAA-------------------A
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           11677 11 +     84689 GATCT---------------------A---------T----AAA-------------------A
i Loris_lydekkerianus.k141_550999                       I 9 C 0
s Loris_tardigradus.ctg97                                 3779426 11 +   6799190 GATCT---------------------A---------T----AAA-------------------A
i Loris_tardigradus.ctg97                               I 9 C 0
s Loxodonta_africana.GL010040.1                          20595935 11 -  62548349 GACCA---------------------A---------T----GAA-------------------A
i Loxodonta_africana.GL010040.1                         I 9 I 2
s Lycaon_pictus.CM007556.1                               11089499 13 +  39895028 GACCA---------------------A---------T--GATAT-------------------A
i Lycaon_pictus.CM007556.1                              I 33 C 0
s Macaca_arctoides.k141_2201161                             21590 11 +     74745 GATCA---------------------A---------T----AAA-------------------A
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12708050 11 +  12821369 GATCA---------------------A---------T----AAA-------------------A
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                 628 11 -     26467 GATCA---------------------A---------T----AAA-------------------A
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           48495 11 +     63263 GATCA---------------------A---------T----AAA-------------------A
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                  605 11 -     26361 GATCA---------------------A---------T----AAA-------------------A
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 3782 11 -      7381 GATCA---------------------A---------T----AAA-------------------A
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  47020 11 -     79256 GATCA---------------------A---------T----AAA-------------------A
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196037122 11 + 196197964 gatca---------------------a---------t----aaa-------------------a
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11447288 11 +  11645122 gatca---------------------a---------t----aaa-------------------a
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   5974 11 -     46448 GATCA---------------------A---------T----AAA-------------------A
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                3640 11 -     13212 GATCA---------------------A---------T----AAA-------------------A
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 17317 11 -     55006 GATCA---------------------A---------T----AAA-------------------A
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43842423 11 +  43892939 GATCA---------------------A---------T----AAA-------------------A
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               18604 11 -     24607 GATCA---------------------A---------T----AAA-------------------A
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               5971 11 -     27140 GATCA---------------------A---------T----AAA-------------------A
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                702096 11 +    802869 AACCA---------------------G---------T----GAA-------------------A
i Macroglossus_sobrinus.MacSob_scaffold_879             I 9 C 0
s Mandrillus_leucophaeus.scaffold125                     43439005 11 -  43563597 GATCA---------------------A---------T----GAA-------------------A
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4451819 11 -   4543643 GATCA---------------------A---------T----GAA-------------------A
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            147178 11 +    252755 GACCA---------------------A---------T----TAG-------------------A
i Manis_javanica.JSZB01003966.1                         I 9 C 0
s Manis_pentadactyla.KN017078.1                             37321 11 +     58827 GAcca---------------------a---------t----taa-------------------a
i Manis_pentadactyla.KN017078.1                         I 9 C 0
s Marmota_marmota.CZRN01000005.1                         36874868 13 +  64221397 AATCA---------------------A---------TGAAAT---------------------G
i Marmota_marmota.CZRN01000005.1                        I 9 I 1
s Mellivora_capensis.MelCap_flattened_line_15433             2140 13 -     87323 GACCA---------------------A---------T--GATAT-------------------A
i Mellivora_capensis.MelCap_flattened_line_15433        I 9 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               14486 16 +     15977 -----------------------------------------A--TTTGATTA--GTGAA---TG
i Meriones_unguiculatus.MerUng_scaffold_52233           I 5 C 0
s Mesocricetus_auratus.KB708139.1                         1048188  1 -  26018355 -----------------------------------------a----------------------
i Mesocricetus_auratus.KB708139.1                       C 0 I 2
s Mesoplodon_bidens.MesBid_scaffold_475714                    241 13 +       551 GACCA---------------------A---------C----GAA---G-T-------------A
i Mesoplodon_bidens.MesBid_scaffold_475714              I 9 C 0
s Microcebus_murinus.CM007691.1                          16511272 11 +  47401472 gatct---------------------a---------t----aaa-------------------a
i Microcebus_murinus.CM007691.1                         I 9 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  39421 11 -     48017 GACCA---------------------A---------T----GAA-------------------G
i Microgale_talazaci.MicTal_scaffold_34660              I 9 I 2
s Micronycteris_hirsuta.MicHir_scaffold_37978               23990 11 -     32043 GACCA---------------------G---------T----GAA-------------------A
i Micronycteris_hirsuta.MicHir_scaffold_37978           I 9 C 0
s Microtus_ochrogaster.CM001673.1                        22820921  2 -  98408828 -----------------------------------------T---------------------G
i Microtus_ochrogaster.CM001673.1                       I 5 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8212102 11 +  10048721 GACCA---------------------G---------T----GAA-------------------A
i Miniopterus_natalensis.LDJU01000022.1                 I 9 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            36591 11 +     45743 GACCA---------------------G---------T----GAA-------------------A
i Miniopterus_schreibersii.MinSch_scaffold_24116        I 9 C 0
s Miopithecus_ogouensis.k141_2935907                         3566 11 +     29742 GATCA---------------------A---------T----GAA-------------------A
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        12629 13 -    104932 GACTA---------------------A---------T--GATAT-------------------A
i Mirounga_angustirostris.MirAng_flattened_line_8852    I 9 C 0
s Mirza_zaza.k141_226143                                     6661 11 +      8497 GATCT---------------------A---------T----AAA-------------------A
i Mirza_zaza.k141_226143                                I 9 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 147522 13 +    154973 GACCA---------------------A---------T----GAA---G-T-------------A
i Monodon_monoceros.MonMon_M_scaffold_5598              I 9 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                162530 11 +    265003 GACCA---------------------A---------T----GAA-------------------A
i Mormoops_blainvillei.MorMeg_scaffold_2952             I 9 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  2614 13 -     19904 GACTA---------------------A---------G----GAA---G-T-------------A
i Moschus_moschiferus.MosMos_scaffold_78805             I 9 I 286
s Mungos_mungo.MunMun_flattened_line_8729                  146049 13 -    168139 GACCA---------------------A---------A--GACAT-------------------A
i Mungos_mungo.MunMun_flattened_line_8729               I 9 C 0
s Murina_feae.MurFea_scaffold_2254                          23545 11 -    100666 GAAAA---------------------G---------T----GAA-------------------A
i Murina_feae.MurFea_scaffold_2254                      I 9 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             13399 13 +     98495 GAACA---------------------C---------AGAAAT---------------------A
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 9 C 0
s Mustela_putorius.JH417978.1                             4425505 13 -  28371801 GACCA---------------------A---------tga--tat-------------------a
i Mustela_putorius.JH417978.1                           I 9 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     91507  9 -    117718 CATCA---------------------A---------T----C---------------------A
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 9 C 0
s Myotis_brandtii.KE161952.1                               970410 11 +   8389877 GAACA---------------------a---------t----gaa-------------------a
i Myotis_brandtii.KE161952.1                            I 9 C 0
s Myotis_davidii.KB114863.1                               5021835 11 +   6462685 GAACA---------------------a---------t----gaa-------------------a
i Myotis_davidii.KB114863.1                             I 9 C 0
s Myotis_lucifugus.GL429887.1                             3467913 11 -   3747815 GAACA---------------------a---------t----gaa-------------------a
i Myotis_lucifugus.GL429887.1                           I 9 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        13156 11 +     66751 GAACA---------------------A---------T----GAA-------------------A
i Myotis_myotis.MyoMyo_scaffold_6123                    I 9 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             6158 11 -      8794 GACCA---------------------A---------T----GAA-------------------G
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        I 9 I 2
s Nasalis_larvatus.k141_153429                              10043 11 +     48152 GATCA---------------------A---------T----GAA-------------------A
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4486019 13 -  14209539 GACCA---------------------A---------T--GATAT-------------------A
i Neomonachus_schauinslandi.NINY01007774.1              I 9 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3952134 13 -   4490290 GACCA---------------------A---------T----Gaa-----------------gta
i Neophocaena_asiaeorientalis.KZ688543.1                I 9 C 0
s Nomascus_annamensis.k141_224620                             640 11 -      2316 GATCA---------------------G---------T----GAA-------------------A
i Nomascus_annamensis.k141_224620                       C 0 C 0
s Nomascus_concolor.k141_226614                              2737 11 -      5092 GATCA---------------------A---------T----TAA-------------------A
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_1032971                            311 11 -      1918 GATCA---------------------A---------T----GAA-------------------A
i Nomascus_gabriellae.k141_1032971                      C 0 C 0
s Nomascus_siki_b.tarseq_80                             26489 11 -  18771707 GATCA---------------------A---------T----GAA-------------------A
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  4159 11 +      4512 GATCA---------------------A---------T----GAA-------------------A
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                32283 13 +   3668941 GACCA---------------------A---------T--GATAT-------------------A
i Nyctereutes_procyonoides.CAJHUB010000786.1            I 33 C 0
s Nycticebus_bengalensis.LG16                            65568131 11 -  95554990 GATCT---------------------A---------T----AAA-------------------A
i Nycticebus_bengalensis.LG16                           I 9 C 0
s Nycticebus_coucang.k141_2051882                            4857 11 +      6470 GATCT---------------------A---------T----AAA-------------------A
i Nycticebus_coucang.k141_2051882                       I 9 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65670464 11 +  89412551 GATCT---------------------A---------T----AAA-------------------A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     I 9 C 0
s Octodon_degus.JH651621.1                                3687007  9 +  10294119 GACCG---------------------A---------T----c---------------------a
i Octodon_degus.JH651621.1                              I 9 C 0
s Odobenus_rosmarus.KB229369.1                             680681 13 -   3126709 GACCA---------------------A---------T--GATAT-------------------A
i Odobenus_rosmarus.KB229369.1                          I 9 C 0
s Odocoileus_virginianus.KZ101650.1                       1080789 13 +   1425656 GACTA---------------------A---------T----GAA---G-T-------------a
i Odocoileus_virginianus.KZ101650.1                     I 9 I 283
s Okapia_johnstoni.LVCL01S0017931.1                         38090 13 +     78940 GACTA---------------------A---------T----GAA---G-T-------------A
i Okapia_johnstoni.LVCL01S0017931.1                     I 9 I 285
s Ondatra_zibethicus.OndZib_scaffold_6821                  126186  2 +    145789 -----------------------------------------T---------------------G
i Ondatra_zibethicus.OndZib_scaffold_6821               I 5 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  38366  2 +     62360 -----------------------------------------A---------------------G
i Onychomys_torridus.OnyTor_scaffold_12578              I 5 C 0
s Orcinus_orca.KB316965.1                                 7225819 13 -   7562323 GACCA---------------------A---------t----gaa-----------------gta
i Orcinus_orca.KB316965.1                               I 9 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              61052 11 -     66828 GACCA---------------------A---------T----TAA-------------------G
i Orycteropus_afer.OryAfe_flattened_line_13509          I 9 I 2
s Oryctolagus_cuniculus.CM000803.1                      141877473 11 + 163896628 tatca---------------------a---------t----gaa-------------------a
i Oryctolagus_cuniculus.CM000803.1                      I 9 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      309576 13 -    505867 GAACA---------------------A---------T--GATAT-------------------A
i Otocyon_megalotis.JAEUCK010005121.1                   I 31 C 0
s Otolemur_crassicaudatus.k141_505435                        1770 11 -     53940 GATCT---------------------A---------T----AAA-------------------A
i Otolemur_crassicaudatus.k141_505435                   I 9 C 0
s Otolemur_garnettii.GL873528.1                          18009751 11 -  38779656 GATCT---------------------A---------T----AAA-------------------A
i Otolemur_garnettii.GL873528.1                         I 9 C 0
s Ovis_aries.CM001582.2                                 134078395  7 - 275406953 ------------------------------------T----GAA---G--------------ta
i Ovis_aries.CM001582.2                                 I 14 I 285
s Ovis_canadensis.OviCan_scaffold_6251                      79610  7 +    140051 ------------------------------------T----GAA---G-T-------------A
i Ovis_canadensis.OviCan_scaffold_6251                  I 14 I 284
s Panthera_onca.PanOnc_flattened_line_1615                  35438 13 +    295523 GACCA---------------------A---------T--GACAT-------------------A
i Panthera_onca.PanOnc_flattened_line_1615              I 9 C 0
s Panthera_pardus.KV860323.1                              3639188 13 +  18214204 GACCA---------------------A---------T--GACAT-------------------A
i Panthera_pardus.KV860323.1                            I 9 C 0
s Panthera_tigris.KE721879.1                              5028864 13 -   6340057 GACCA---------------------A---------T--GACAT-------------------A
i Panthera_tigris.KE721879.1                            I 9 C 0
s Pantholops_hodgsonii.KE114631.1                         1067244  7 -   1292953 ------------------------------------T----GAA---G--------------ta
i Pantholops_hodgsonii.KE114631.1                       I 14 I 285
s Papio_anubis.CM001492.2                               188157799 11 - 188283584 GATca---------------------a---------t----gaa-------------------a
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                               891 11 +     25005 GATCA---------------------A---------T----GAA-------------------A
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47515176 11 +  47705337 GATCA---------------------A---------T----GAA-------------------A
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 69166 11 -    104429 GATCA---------------------A---------T----GAA-------------------A
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    7695 11 +     14967 GATCA---------------------A---------T----GAA-------------------A
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 3560 11 -      7628 GATCA---------------------A---------T----GAA-------------------A
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    116926 13 -    135482 GACCA---------------------A---------T--GGCAT-------------------A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 I 9 C 0
s Perodicticus_ibeanus.k141_117958                           6455 11 -     23713 GATCC---------------------A---------T----AAA-------------------A
i Perodicticus_ibeanus.k141_117958                      I 9 C 0
s Perodicticus_potto.k141_713187                            25768 11 -     27972 GATCT---------------------A---------T----AAA-------------------A
i Perodicticus_potto.k141_713187                        I 9 C 0
s Peromyscus_maniculatus.KI615518.1                       4951302  2 -   8017169 -----------------------------------------t---------------------g
i Peromyscus_maniculatus.KI615518.1                     I 5 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    14731  9 -     36578 GATCA---------------------A---------T----C---------------------T
i Petromus_typicus.PetTyp_scaffold_33007                I 9 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071               276 13 +      8220 GACCA---------------------A---------T----GAA---G-T-------------A
i Phocoena_phocoena.PhoPho_flattened_line_53071         I 9 C 0
s Piliocolobus_badius.k141_1987485                           3576 11 -      5908 GATCA---------------------A---------T----GAA-------------------A
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       4194 11 -     17985 GATCA---------------------A---------T----GAA-------------------A
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            3561 11 +      7694 GATCA---------------------A---------T----GAA-------------------A
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26742045 11 +  26888534 GATca---------------------a---------t----gaa-------------------a
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pithecia_albicans.k141_991845                             44993 10 -     61926 GATAA---------------------A---------T----AAA--------------------
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        26376 10 +     78826 GATAA---------------------A---------T----AAA--------------------
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                             10424 10 -     15800 GATAA---------------------A---------T----AAA--------------------
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        13623 10 -     16101 GATAA---------------------A---------T----AAA--------------------
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          6852 10 +      9673 GATAA---------------------A---------T----AAA--------------------
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13475852 10 -  19735023 GATAA---------------------A---------T----AAA--------------------
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           14755 10 -     31692 GATAA---------------------A---------T----AAA--------------------
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           6740 13 +     21690 GACCA---------------------A---------T----GAA---G-T-------------A
i Platanista_gangetica.PlaMin_flattened_line_72990      I 9 C 0
s Plecturocebus_bernhardi.k141_959214                       24091  8 +     44506 GATAA---------------------A---------T----A----------------------
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        24304  8 +     67491 GATAA---------------------A---------T----A----------------------
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      14543  8 -     98129 GATAA---------------------A---------T----A----------------------
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     24143  8 +    147771 GATAA---------------------A---------T----A----------------------
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                          779  8 -     43940 GATAA---------------------A---------T----A----------------------
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          4862  8 -     55515 GATAA---------------------A---------T----A----------------------
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         24216  8 +    152463 GATAA---------------------A---------T----A----------------------
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       1933  8 -    119457 GATAA---------------------A---------T----A----------------------
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         13939  8 +    134592 GATAA---------------------A---------T----A----------------------
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          24526  8 -     75465 GATAA---------------------A---------T----A----------------------
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              188681 11 -    373494 gatca---------------------a---------t----gaa-------------------a
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19809328 11 +  19899266 GATCA---------------------A---------T----GAA-------------------A
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               7323 11 -     15069 GATCA---------------------A---------T----GAA-------------------A
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              7438 11 +     14865 GATCA---------------------A---------T----GAA-------------------A
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6849611 11 +  12164890 GATCT---------------------G---------T----AAA-------------------T
i Prolemur_simus.MPIZ01000048.1                         I 9 C 0
s Propithecus_coquerelli.NW_012147863.1                     19785 11 -     30946 nnnnn---------------------n---------n----nnn-------------------n
i Propithecus_coquerelli.NW_012147863.1                 I 9 C 0
s Propithecus_coronatus.k141_1353159                         4690 11 +     11805 GATCT---------------------A---------T----AAA-------------------A
i Propithecus_coronatus.k141_1353159                    I 9 C 0
s Propithecus_diadema.k141_577245                           44038 11 +     52369 GATCT---------------------A---------T----AAA-------------------A
i Propithecus_diadema.k141_577245                       I 9 C 0
s Propithecus_edwardsi.k141_1317105                         36425 11 -     44753 GATCT---------------------A---------T----AAA-------------------A
i Propithecus_edwardsi.k141_1317105                     I 9 C 0
s Propithecus_perrieri.k141_7554                            18348 11 +     27322 GCTCT---------------------A---------T----AAA-------------------A
i Propithecus_perrieri.k141_7554                        I 9 C 0
s Propithecus_tattersalli.k141_907138                       17982 11 -     53241 GATCT---------------------A---------T----AAA-------------------A
i Propithecus_tattersalli.k141_907138                   I 9 C 0
s Propithecus_verreauxi.k141_158021                         40246 11 -     48185 GATCT---------------------A---------T----AAA-------------------A
i Propithecus_verreauxi.k141_158021                     I 9 C 0
s Psammomys_obesus.NESX01026517.1                           36589  1 +     77221 ---------------------------------------------------------------g
i Psammomys_obesus.NESX01026517.1                       I 59 C 0
s Pteronotus_parnellii.KE867983.1                            5179 11 -     27784 GGCCA---------------------G---------T----GAT-------------------A
i Pteronotus_parnellii.KE867983.1                       I 9 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        247817 13 -    344369 GACCA---------------------A---------T--GATAT-------------------A
i Pteronura_brasiliensis.PteBra_flattened_line_1343     I 9 C 0
s Pteropus_alecto.KB031157.1                             13247100 11 -  17261082 GACCa---------------------g---------t----gaa-------------------a
i Pteropus_alecto.KB031157.1                            I 9 C 0
s Pteropus_vampyrus.KN525959.1                             605050 11 -   3946241 GACCa---------------------g---------t----gaa-------------------a
i Pteropus_vampyrus.KN525959.1                          I 9 C 0
s Puma_concolor.QAVW01000427.1                          131535459 13 - 161321710 GACCA---------------------A---------T--GACAT-------------------A
i Puma_concolor.QAVW01000427.1                          I 9 C 0
s Pygathrix_cinerea.k141_374971                             31427 11 +     56732 GATCA---------------------A---------T----GAA-------------------A
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6807921 11 +   6970761 GATCA---------------------A---------T----GAA-------------------A
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             7314 11 +     18040 GATCA---------------------A---------T----GAA-------------------A
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                16901 13 +     68503 GACTA---------------------A---------T----GAA---G-T-------------A
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 9 I 283
s Rhinolophus_sinicus.LVEH01000179.1                      1788979 11 +   2252614 GACCA---------------------G---------T----GAA-------------------A
i Rhinolophus_sinicus.LVEH01000179.1                    I 9 C 0
s Rhinopithecus_bieti.k119_554384                            1710 11 -     17045 GATCA---------------------A---------T----GAA-------------------A
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206379198 11 - 206558726 GATCA---------------------A---------T----GAA-------------------A
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44858100 11 -  45163003 GATCA---------------------A---------T----GAA-------------------A
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                20438 11 +    109198 GACCA---------------------G---------T----GAA-------------------A
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            I 9 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       9071  7 +     12214 ------------------------------------T----GAA---G-T-------------A
i Saiga_tatarica.SaiTat_scaffold_82192                  I 14 I 285
s Saimiri_boliviensis.NW_024100938.1                     15673940 11 -  43202129 gataa---------------------a---------t----gaa-------------------a
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        5853 11 +     34089 AATAA---------------------A---------T----GAA-------------------A
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              5795 11 -     60842 AATAA---------------------A---------T----GAA-------------------A
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              5888 11 +     67014 AATAA---------------------A---------T----GAA-------------------A
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              5866 11 +     60816 AATAA---------------------A---------T----GAA-------------------A
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 5803 11 -     76454 AATAA---------------------A---------T----GAA-------------------A
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17342535 11 -  30362882 AATAA---------------------A---------T----AAA-------------------A
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         21896 11 -     62485 AATAA---------------------A---------T----AAA-------------------A
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Semnopithecus_entellus.k141_1572367                        4930 11 +     15331 GATCA---------------------A---------T----GAA-------------------A
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      10305 11 +     20762 GATCA---------------------A---------T----GAA-------------------A
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         120310 11 +    130994 GATCA---------------------A---------T----GAA-------------------A
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           39089 11 +     46263 GATCA---------------------A---------T----GAA-------------------A
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     32234 11 +     42640 GATCA---------------------A---------T----GAA-------------------A
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        15256 11 +     30600 GATCA---------------------A---------T----GAA-------------------A
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  101533  2 -    120886 -----------------------------------------T---------------------G
i Sigmodon_hispidus.SigHis_scaffold_11332               I 5 C 0
s Spermophilus_dauricus.KZ294190.1                        2240877 13 +   2842873 AATCT---------------------G---------TGAAAT---------------------G
i Spermophilus_dauricus.KZ294190.1                      I 9 I 1
s Spilogale_gracilis.SpiGra_flattened_line_905             236192 13 -    276980 GACCA---------------------A---------T--GATAC-------------------A
i Spilogale_gracilis.SpiGra_flattened_line_905          I 9 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            28708 13 +     62062 GACCA---------------------A---------A--GACAT-------------------A
i Suricata_suricatta.SurSur_flattened_line_20339        I 9 C 0
s Sus_scrofa.CM000824.4                                 189273210 13 + 218635234 GACCA---------------------A---------A----GAA---G--------------ta
i Sus_scrofa.CM000824.4                                 I 9 C 0
s Symphalangus_syndactylus.tarseq_24                        16433 11 -  13920577 GATCA---------------------A---------T----GAA-------------------A
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                1408 11 +     20549 GACCA---------------------G---------T----GAA-------------------A
i Tadarida_brasiliensis.TadBra_scaffold_61492           I 9 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               15824 11 +     45698 GACCA---------------------A---------T----GAA-------------------G
i Tamandua_tetradactyla.TamTet_scaffold_26877           I 9 I 2
s Tapirus_indicus.TapInd_scaffold_176                      808259 13 +   1148477 AGTGA---------------------A---------T----GAA----A-----------C--A
i Tapirus_indicus.TapInd_scaffold_176                   I 9 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  58972 13 +     99546 AGTGA---------------------A---------T----GAA----AT-------------A
i Tapirus_terrestris.TapTer_scaffold_14939              I 9 C 0
s Theropithecus_gelada.CM009951.1                       194009327 11 - 194193292 GATca---------------------a---------t----gaa-------------------a
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             40088  9 -     47444 GATCA---------------------A---------C----C---------------------T
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         I 9 C 0
s Tolypeutes_matacus.TolMat_scaffold_1305119                   14 11 -       594 GACCA---------------------A---------T----GAA-------------------G
i Tolypeutes_matacus.TolMat_scaffold_1305119            I 9 I 2
s Tonatia_saurophila.TonSau_scaffold_3334                  137154 11 -    259118 GACCT---------------------G---------T----GAA-------------------A
i Tonatia_saurophila.TonSau_scaffold_3334               I 9 C 0
s Trachypithecus_auratus.k141_738098                        28577 11 +     38948 GATCA---------------------A---------T----GAA-------------------A
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   22137 11 -     32910 GATCA---------------------A---------T----GAA-------------------A
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      4038 11 -     12939 GATCA---------------------A---------T----GAA-------------------A
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       3466 11 -     14244 GATCA---------------------A---------T----GAA-------------------A
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           44864 11 -     54611 GATCA---------------------A---------T----GAA-------------------A
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        2660 11 -     11566 GATCA---------------------A---------T----GAA-------------------A
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     4844 11 -     15592 GATCA---------------------A---------T----GAA-------------------A
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          3496 11 +     14371 GATCA---------------------A---------T----GAA-------------------A
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   1782 11 +     12481 GATCA---------------------A---------T----GAA-------------------A
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        1763 11 -     24393 GATCA---------------------A---------T----GAA-------------------A
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       6907 11 -     28054 GATCA---------------------A---------T----GAA-------------------A
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44661691 11 -  44834318 GATCA---------------------A---------T----GAA-------------------A
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       4008 11 +     13828 GATCA---------------------A---------T----GAA-------------------A
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   6255 13 +     90398 TACCA---------------------A---------T----GAA---G-T-------------A
i Tragulus_javanicus.TraJav_scaffold_14717              I 9 I 289
s Trichechus_manatus.JH594618.1                          16086949 11 +  31416278 GACCA---------------------A---------T----GAA-------------------A
i Trichechus_manatus.JH594618.1                         I 9 I 2
s Tupaia_chinensis.KB320831.1                             2794580 11 -   3938065 GATCA---------------------G---------G----GAA-------------------A
i Tupaia_chinensis.KB320831.1                           I 9 I 2
s Tupaia_tana.TupTan_flattened_line_68454                    6684 11 +     13056 GATCA---------------------G---------G----GAA-------------------A
i Tupaia_tana.TupTan_flattened_line_68454               I 9 I 2
s Tursiops_truncatus.MRVK01000923.1                      69314535 13 -  96451834 GACCA---------------------A---------t----gaa-----------------gta
i Tursiops_truncatus.MRVK01000923.1                     I 9 C 0
s Ursus_maritimus.KK498671.1                              6515937 13 +  28682327 GACCA---------------------a---------tga--tat-------------------a
i Ursus_maritimus.KK498671.1                            I 9 C 0
s Varecia_rubra.k141_432109                                  6246 11 -     20643 GATCT---------------------A---------T----AAA-------------------T
i Varecia_rubra.k141_432109                             I 9 C 0
s Varecia_variegata.k141_775891                             25781 11 -     33872 GATCT---------------------A---------T----AAA-------------------T
i Varecia_variegata.k141_775891                         I 9 C 0
s Vicugna_pacos.KN269600.1                                1525750 13 -   2331223 GACta---------------------a---------t----gaa-----------------atg
i Vicugna_pacos.KN269600.1                              I 9 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                139678 13 -    281493 GACCA---------------------A---------T--GATAT-------------------A
i Vulpes_lagopus.VulLag_flattened_line_2045             I 33 C 0
s Xerus_inauris.XerIna_scaffold_7898                       127995 13 -    134049 GATCA---------------------A---------TGAAAT---------------------A
i Xerus_inauris.XerIna_scaffold_7898                    I 9 I 1
s Zalophus_californianus.ZalCal_flattened_line_4097        215407 22 -    227762 GACCA---------------------ATGATATCAAT--GATAT-------------------A
i Zalophus_californianus.ZalCal_flattened_line_4097     I 9 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     16949  1 -     20485 ---------------------------------------------------------------G
i Zapus_hudsonius.ZapHud_scaffold_64392                 I 19 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           8027 13 -      8775 GACCA---------------------A---------C----GAA---G-T-------------A
i Ziphius_cavirostris.ZipCav_flattened_line_127025      I 9 C 0
e Sorex_araneus.JH798170.1                               17767560  7 -  27805282 I
e Ochotona_princeps.JH802095.1                            4996729 2205 -  23139505 I
e Perognathus_longimembris.PerPac_flattened_line_19359        892 695 +     49596 I
e Dipodomys_ordii.KN672545.1                              3657363 894 +   4240102 I
e Uropsilus_gracilis.UroGra_scaffold_69449                   8373 21 +     10241 I
e Solenodon_paradoxus.SolPar_flattened_line_1012            20004  7 +    739146 I
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   37806 20 -    114521 I
e Procavia_capensis.ProCapCap_scaffold_149274                2467 1156 -      9567 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Megaderma_lyra.MegLyr_scaffold_3562                       64783 239 -    234502 I
e Heterohyrax_brucei.HetBruBak_scaffold_25354               61360 1157 +     73687 I
e Echinops_telfairi.JH980316.1                           22999931  2 -  44670279 I
e Crocidura_indochinensis.CroInd_scaffold_848148              644  7 +      1327 I
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1008 325 -      5782 I
e Condylura_cristata.JH655880.1                          60620671 20 +  78930452 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19677 266 -    119109 I
e Jaculus_jaculus.JH727545.1                                 2310  1 -      4668 I
e Tarsius_wallacei.k141_48636                               60532 3805 +     65473 I
e Tarsius_lariang.k141_609102                               27216 3812 +     42269 I
e Rattus_norvegicus.chr11                                13915860 1475 +  90463843 I
e Nannospalax_galili.KL201303.1                            119252 614 +    362372 I
e Mus_spretus.CM004110.1                                 74333573 2703 +  97876770 I
e Mus_pahari.LT608305.1                                  67557037 2889 +  89017189 I
e Mus_musculus.chr16                                     75490838 2711 +  98207768 I
e Mus_caroli.LT608236.1                                  70767758 3738 +  92629107 I
e Dolichotis_patagonum.DolPat_scaffold_14102                36772 276 -     73477 I
e Dasyprocta_punctata.DasPun_flattened_line_634             59553 276 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                18462 277 +     26546 I
e Ctenodactylus_gundi.CteGun_scaffold_447                  209506 3013 -    956709 I
e Cephalopachus_bancanus.k141_702587                         8788 3391 +     21754 I
e Cavia_tschudii.CavTsc_scaffold_488                       177453 271 +    436027 I
e Cavia_porcellus.DS562889.1                             15799262 290 -  24440124 I
e Cavia_aperea.AVPZ01000278.1                            15787326 288 -  24422027 I
e Carlito_syrichta.NW_007248099.1                          309764 3411 +    345090 I
e Pan_paniscus.CM003386.1                               127575888 480 - 205426864 I
e Pan_troglodytes.CM009241.2                            120153042 480 - 196562556 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               15093  6 +    209709 T---------------A---T----------------G----------T--------T
s Acinonyx_jubatus.LLWD01000356.1                         2035112  6 +   3721120 T---------------G---T----------------T----------A--------T
i Acinonyx_jubatus.LLWD01000356.1                       C 0 I 3
s Acomys_cahirinus.AcoCah_scaffold_1625                    114969  6 -    189883 T---------------A---T----------------T----------T--------G
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 I 3
s Ailuropoda_melanoleuca.LNAT01000321.1                  10658679  6 +  23371972 t---------------g---t----------------t----------a--------t
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 I 3
s Ailurus_fulgens.LNAC01000003.1                          7095813  6 -  16596857 T---------------G---T----------------A----------A--------T
i Ailurus_fulgens.LNAC01000003.1                        C 0 I 3
s Allactaga_bullata.AllBul_scaffold_70162                   19346  8 -     22067 g-------------ttt---t----------------t----------t--------a
i Allactaga_bullata.AllBul_scaffold_70162               C 0 I 3
s Allenopithecus_nigroviridis.k141_2469532                   2820  6 -     60446 T---------------A---T----------------G----------T--------T
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         3537  6 -     29318 T---------------A---T----------------G----------T--------T
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         2473  6 +     38766 T---------------A---T----------------G----------T--------T
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          3431  6 -     80423 T---------------A---T----------------G----------T--------T
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            11418  6 -     18050 T---------------A---T----------------G----------A--------T
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_1710068                               1134  6 +      1555 T---------------A---T----------------G----------A--------T
i Alouatta_caraya.k141_1710068                          C 0 C 0
s Alouatta_discolor.k141_811576                             12091  6 -     21359 T---------------A---T----------------G----------A--------T
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                1714  6 +      2129 T---------------A---T----------------G----------A--------T
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_2177643                          1091  6 -      1868 T---------------A---T----------------G----------A--------T
i Alouatta_macconnelli.k141_2177643                     C 0 C 0
s Alouatta_nigerrima.k141_3537692                            1140  6 +      1660 T---------------A---T----------------G----------A--------T
i Alouatta_nigerrima.k141_3537692                       C 0 C 0
s Alouatta_palliata.k141_2764429                             1060  6 -      1480 T---------------A---T----------------G----------A--------T
i Alouatta_palliata.k141_2764429                        C 0 C 0
s Alouatta_puruensis.k141_131505                              347  6 +      4855 T---------------A---T----------------G----------A--------T
i Alouatta_puruensis.k141_131505                        C 0 C 0
s Alouatta_seniculus.k141_1531728                            1275  6 -      1692 T---------------A---T----------------G----------A--------T
i Alouatta_seniculus.k141_1531728                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3521536  6 +   4113121 t---------------g---t----------------t----------t--------t
i Ammotragus_lervia.NIVO01013474.1                      I 285 I 3
s Anoura_caudifer.AnoCau_scaffold_422                      391623  8 -    631301 T---------------ATA-T----------------T----------T--------T
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 I 3
s Antilocapra_americana.AntAmePen_scaffold_42841            32120  6 +     33004 T---------------G---T----------------T----------T--------T
i Antilocapra_americana.AntAmePen_scaffold_42841        I 283 I 3
s Aotus_azarae.k141_3170768                                 63762  5 +     78111 ----------------A---T----------------G----------T--------T
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            6705  5 +     22701 ----------------A---T----------------G----------T--------T
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5750662  5 +   9889416 ----------------a---t----------------g----------t--------t
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             7251  5 -    104377 ----------------A---T----------------G----------T--------T
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               7253  5 +     23246 ----------------A---T----------------G----------T--------T
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_231055                     1144  6 -      2492 A---------------G---T----------------T----------T--------T
i Aplodontia_rufa.AprRuf_scaffold_231055                C 0 I 3
s Arctocebus_calabarensis.k141_587554                        2060  6 +      9265 G---------------A---T----------------G----------T--------T
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                10040  8 -     29036 T---------------ATG-G----------------T----------T--------T
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 I 3
s Ateles_geoffroyi_b.tarseq_2582                             9540527  6 +  39197703 T---------------A---T----------------G----------A--------T
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             61800  6 +     85812 T---------------A---T----------------G----------A--------T
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                12813  6 +     89302 T---------------A---T----------------G----------A--------T
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             17314  6 -     58268 T---------------A---T----------------G----------A--------T
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             65308  6 +    119057 T---------------A---T----------------G----------A--------T
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               7277  6 -     25888 T---------------A---T----------------G----------A--------T
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 7793  6 -     16375 T---------------A---T----------------G----------T--------T
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               1409  6 +      6337 T---------------A---T----------------G----------T--------T
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26381317  3 +  51448160 t---------------g---t-------------------------------------
i Balaenoptera_acutorostrata.KI537095.1                 C 0 I 199
s Balaenoptera_bonaerensis.DF502048.1                        6489  3 -     13118 t---------------g---t-------------------------------------
i Balaenoptera_bonaerensis.DF502048.1                   C 0 I 200
s Beatragus_hunteri.BeaHun_scaffold_21644                   44642  6 -     72089 T---------------G---T----------------T----------G--------T
i Beatragus_hunteri.BeaHun_scaffold_21644               I 285 I 3
s Bison_bison.KN264915.1                                  6561263  6 +   6870073 t---------------g---t----------------t----------t--------t
i Bison_bison.KN264915.1                                I 278 I 3
s Bos_indicus.CM003021.1                                138141385  6 - 161108492 t---------------g---t----------------t----------t--------t
i Bos_indicus.CM003021.1                                I 285 I 3
s Bos_mutus.JH883513.1                                     573915  6 -    998990 t---------------g---t----------------t----------t--------t
i Bos_mutus.JH883513.1                                  I 278 I 3
s Bos_taurus.CM000177.6                                 136297118  6 - 158972876 t---------------g---t----------------t----------t--------t
i Bos_taurus.CM000177.6                                 I 285 I 3
s Bubalus_bubalis.KI419065.1                              1234199  6 -   1914593 t---------------g---t----------------t----------t--------t
i Bubalus_bubalis.KI419065.1                            I 285 I 3
s Cacajao_ayresi.k141_724503                               115160  7 -    171031 ----------------A---TA--T------------A----------T--------T
i Cacajao_ayresi.k141_724503                            I 2 C 0
s Cacajao_calvus.k141_96166                                 14189  7 +    125063 ----------------A---TA--T------------A----------T--------T
i Cacajao_calvus.k141_96166                             I 2 C 0
s Cacajao_hosomi.k141_303789                                16232  7 -    216513 ----------------A---TA--T------------A----------T--------T
i Cacajao_hosomi.k141_303789                            I 2 C 0
s Cacajao_melanocephalus.k141_1160263                        8775  7 -    134917 ----------------A---TA--T------------A----------T--------T
i Cacajao_melanocephalus.k141_1160263                   I 2 C 0
s Camelus_bactrianus.KN276303.1                           3220658  6 -   8989139 t---------------g---t----------------t----------t--------t
i Camelus_bactrianus.KN276303.1                         C 0 I 3
s Camelus_dromedarius.KN271192.1                           398359  6 -  15254737 t---------------g---t----------------t----------t--------t
i Camelus_dromedarius.KN271192.1                        C 0 I 3
s Camelus_ferus.KB016973.1                                2974095  6 +   6889770 t---------------g---t----------------t----------t--------t
i Camelus_ferus.KB016973.1                              C 0 I 3
s CanFam4.chr31                                          11520854  6 +  39901454 G---------------G---T----------------T----------A--------T
i CanFam4.chr31                                         C 0 I 3
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   15879  6 +     87036 G---------------G---T----------------T----------A--------T
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 I 3
s Canis_lupus_dingo.QKWQ01001993.1                       11267523  6 -  35597290 G---------------G---t----------------t----------a--------t
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 I 3
s Canis_lupus_familiaris.chr31                           11090056  6 +  39895921 G---------------G---t----------------t----------a--------t
i Canis_lupus_familiaris.chr31                          C 0 I 3
s Canis_lupus_orion.HG994411.1                           16457069  6 -  44759192 G---------------G---t----------------t----------a--------t
i Canis_lupus_orion.HG994411.1                          C 0 I 3
s Capra_aegagrus.CM003214.1                              21326607  6 + 157394656 t---------------g---t----------------t----------t--------t
i Capra_aegagrus.CM003214.1                             I 285 I 3
s Capra_hircus.CM004562.1                               135707835  6 - 157403528 t---------------g---t----------------t----------t--------t
i Capra_hircus.CM004562.1                               I 285 I 3
s Carollia_perspicillata.CarPer_scaffold_4436               60827  8 +     67245 C---------------ATG-T----------------T----------T--------T
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 I 3
s Castor_canadensis.CasCan_scaffold_47037                   32224  6 +     33760 T---------------A---T----------------T----------T--------T
i Castor_canadensis.CasCan_scaffold_47037               C 0 I 3
s Catagonus_wagneri.CatWag_scaffold_1305                   160265  6 -    276539 T---------------G---T----------------T----------T--------T
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 I 3
s Cebus_albifrons.Contig22                               18892001  6 -  29618158 T---------------A---T----------------G----------T--------C
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 9545  6 -     26817 T---------------A---T----------------G----------T--------C
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                13788  6 +     25043 T---------------A---T----------------G----------T--------C
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4365032  6 +   7569818 T---------------G---T----------------T----------C--------T
i Ceratotherium_simum.JH767818.1                        C 0 I 3
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         4789  6 -      9338 T---------------G---T----------------T----------C--------T
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 I 3
s Cercocebus_atys.KQ010443.1                              6556767  6 +   6739814 t---------------a---t----------------g----------t--------t
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      28241  6 +     60454 T---------------A---T----------------G----------T--------T
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          3448  6 -     21101 T---------------A---T----------------G----------T--------T
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         60758  6 -    107033 T---------------A---T----------------G----------T--------T
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        3637  6 -     17608 T---------------A---T----------------G----------T--------C
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                           796  6 +     45019 T---------------A---T----------------G----------T--------T
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                            880  6 +     15177 T---------------G---T----------------G----------T--------T
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          3680  6 +     16677 T---------------A---T----------------G----------T--------T
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           25850  6 +     35983 T---------------A---T----------------G----------T--------T
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11992378  6 +  12117833 T---------------A---T----------------G----------T--------T
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46479136  6 +  46592721 T---------------A---T----------------G----------T--------T
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      42690  6 -     45581 T---------------A---T----------------G----------T--------T
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       3692  6 +     35577 T---------------A---T----------------G----------T--------T
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        3465  6 -     25661 T---------------A---T----------------G----------T--------C
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        3444  6 -     17744 T---------------A---T----------------G----------T--------T
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        23050  6 +     37128 T---------------A---T----------------G----------T--------T
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           3872  6 -      6963 G---------------G---T----------------T----------T--------T
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      I 2 I 3
s Cheirogaleus_major.k141_1157592                           60064  6 -     68416 T---------------A---T----------------G----------T--------T
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            9116  6 +     13308 T---------------A---T----------------G----------T--------T
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             6820  4 -     18223 --------------------T----------------G----------T--------T
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             23838  4 +     25473 --------------------T----------------G----------T--------T
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           42878  4 +     57117 --------------------T----------------G----------T--------T
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          47557  4 +     54541 --------------------T----------------G----------T--------T
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15962834  6 +  43084221 T---------------G---A----------------T----------T--------T
i Chinchilla_lanigera.JH721867.1                        C 0 I 3
s Chiropotes_israelita.k141_1189915                         72361  7 +    196370 ----------------A---TA--T------------G----------T--------T
i Chiropotes_israelita.k141_1189915                     I 2 C 0
s Chiropotes_sagulatus.k141_773804                          16541  7 +     40510 ----------------A---TA--T------------G----------T--------T
i Chiropotes_sagulatus.k141_773804                      I 2 C 0
s Chlorocebus_aethiops.ctg22                             15141047  6 -  15256731 T---------------A---T----------------G----------T--------T
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      35656  6 -     53260 T---------------A---T----------------G----------T--------T
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101146215  6 + 101219884 t---------------a---t----------------g----------t--------t
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                17632  6 -     21363 G---------------G---T----------------T----------T--------T
i Choloepus_didactylus.ChoDid_scaffold_36182            I 2 I 3
s Choloepus_hoffmanni.KN194586.1                           762937  6 +    964067 g---------------g---t----------------t----------t--------t
i Choloepus_hoffmanni.KN194586.1                        I 2 I 3
s Colobus_angolensis.KN985967.1                          10888207  6 +  10971483 T---------------A---T----------------G----------C--------T
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147666135  6 + 156195979 T---------------A---T----------------G----------C--------T
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            18118  6 +     23629 T---------------A---T----------------G----------C--------T
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60620691  5 +  78930452 ----------------g---t----------------t----------t--------t
i Condylura_cristata.JH655880.1                         I 20 I 3
s Cricetomys_gambianus.CriGam_scaffold_949                 279483  6 -    399297 T---------------A---T----------------T----------T--------T
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 I 3
s Cricetulus_griseus.LT883672.1                          53031593  2 +  72327488 ------------------------------------------------T--------T
i Cricetulus_griseus.LT883672.1                         I 2 I 3
s Crocidura_indochinensis.CroInd_scaffold_848148              651 21 +      1327 TTGACCAATGAAATATG---T----------------T----------T--------T
i Crocidura_indochinensis.CroInd_scaffold_848148        I 7 I 3
s Cryptoprocta_ferox.CryFer_flattened_line_19014            53168  6 -     70449 T---------------G---T----------------T----------A--------T
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 I 3
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 32190  6 -     67205 T---------------G---T----------------T----------T--------T
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 I 3
s Dasypus_novemcinctus.JH568778.1                          184741  6 -   6883506 t---------------g---t----------------t----------t--------t
i Dasypus_novemcinctus.JH568778.1                       I 2 I 3
s Daubentonia_madagascariensis.ctg11                     16845929  6 +  31942871 T---------------A---T----------------G----------T--------T
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80037945  3 -  96802777 t---------------g---t-------------------------------------
i Delphinapterus_leucas.KZ290064.1                      C 0 I 195
s Desmodus_rotundus.KZ672188.1                           18700118  8 -  18957592 t---------------atg-t----------------t----------t--------t
i Desmodus_rotundus.KZ672188.1                          C 0 I 3
s Dicerorhinus_sumatrensis.PEKH010003161.1                 323684  6 +    993696 T---------------G---T----------------T----------C--------T
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 I 3
s Diceros_bicornis.DicBicMic_scaffold_9545                   4336  6 +    151128 T---------------G---T----------------T----------C--------T
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 I 3
s Dinomys_branickii.DinBra_scaffold_1996                   158033  6 +    228994 T---------------G---T----------------T----------T--------T
i Dinomys_branickii.DinBra_scaffold_1996                C 0 I 3
s Eidolon_helvum.KE772537.1                                 13391  8 +     24177 t---------------aca-t----------------t----------t--------a
i Eidolon_helvum.KE772537.1                             C 0 I 3
s Elaphurus_davidianus.JRFZ01086400.1                     1492868  6 +   1727528 t---------------g---t----------------t----------t--------t
i Elaphurus_davidianus.JRFZ01086400.1                   I 284 I 3
s Elephantulus_edwardii.JH947210.1                        7829832  8 +  15467074 C---------------A---T-G-T------------T----------T--------T
i Elephantulus_edwardii.JH947210.1                      I 2 I 1
s Ellobius_lutescens.LOEQ01003611.1                        240564  4 -    369425 T---------------A---T----------------T--------------------
i Ellobius_lutescens.LOEQ01003611.1                     C 0 I 10
s Ellobius_talpinus.LOJH01090055.1                           7734 16 -      7838 T---------------A---T----------------TGATTAGTAGAT--------T
i Ellobius_talpinus.LOJH01090055.1                      C 0 I 3
s Enhydra_lutris.KZ291749.1                              85873254  4 +  99434291 --------------------t----------------t----------a--------t
i Enhydra_lutris.KZ291749.1                             C 0 I 3
s Eptesicus_fuscus.JH977687.1                             4708081  8 +   6522550 t---------------atg-t----------------t----------t--------t
i Eptesicus_fuscus.JH977687.1                           C 0 I 3
s Equus_asinus.JREZ01000062.1                             5854322  6 -   7175178 t---------------g---t----------------t----------t--------t
i Equus_asinus.JREZ01000062.1                           C 0 I 3
s Equus_caballus.CM000402.2                              13352822  6 +  41866177 t---------------g---t----------------t----------t--------t
i Equus_caballus.CM000402.2                             C 0 I 3
s Equus_przewalskii.ATBW01073585.1                          14312  6 +     92910 t---------------g---t----------------t----------t--------t
i Equus_przewalskii.ATBW01073585.1                      C 0 I 3
s Erythrocebus_patas.Contig8                             48778226  6 -  48907691 T---------------A---T----------------G----------T--------T
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          316157  3 +    330699 T---------------G---T-------------------------------------
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 I 200
s Eubalaena_japonica.EubJap_flattened_line_7756             62613  3 +     89355 T---------------G---T-------------------------------------
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 I 199
s Eulemur_albifrons.k141_715837                              6103  6 +     13586 T---------------A---T----------------G----------T--------T
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               6035  6 -      6809 T---------------A---T----------------G----------T--------T
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            12509  6 +     36558 T---------------A---T----------------G----------T--------T
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             8826  6 +     60246 T---------------A---T----------------G----------T--------T
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                12308  6 +    109717 T---------------A---T----------------G----------T--------T
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                  293  6 -     19505 T---------------A---T----------------G----------T--------T
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                16968  6 +     27497 T---------------A---T----------------G----------T--------T
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           19424  6 +     26808 T---------------A---T----------------G----------T--------T
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                34162  6 +     46535 T---------------A---T----------------G----------T--------T
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              16888  6 -     29447 T---------------A---T----------------G----------T--------T
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129894084  6 - 159252932 T---------------G---T----------------T----------A--------T
i Felis_catus.CM001386.2                                C 0 I 3
s Felis_catus_fca126.CM031420.1                         129281168  6 - 158578461 T---------------G---T----------------T----------A--------T
i Felis_catus_fca126.CM031420.1                         C 0 I 3
s Felis_nigripes.FelNig_flattened_line_8080                 22308  6 +     52776 T---------------G---T----------------T----------A--------T
i Felis_nigripes.FelNig_flattened_line_8080             C 0 I 3
s Fukomys_damarensis.KN123630.1                          13892495  7 -  19261668 t---------------t-t-t----------------t----------t--------t
i Fukomys_damarensis.KN123630.1                         C 0 I 3
s Galago_moholi.ctg555                                     211966  6 -    847004 G---------------A---T----------------G----------T--------T
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           14337  6 -     43889 G---------------A---T----------------G----------T--------T
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          11406  6 +     27357 G---------------A---T----------------G----------T--------T
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               157432  6 +    324696 T---------------G---T----------------T----------G--------T
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 I 3
s Giraffa_tippelskirchi.LVKQ01S012154.1                    182662  6 -    189561 t---------------g---t----------------t----------t--------t
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 285 I 3
s Glis_glis.GliGli_scaffold_79770                           14902  6 -     18683 T---------------G---T----------------T----------T--------T
i Glis_glis.GliGli_scaffold_79770                       C 0 I 3
s Gorilla_beringei.k141_111300                               6807  6 -     14630 T---------------A---C----------------G----------A--------T
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119653907  6 - 195582420 t---------------a---c----------------g----------A--------T
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   78316  6 +    118900 T---------------G---T----------------T----------T--------T
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 I 3
s Hapalemur_alaotrensis.k141_1280836                         2893  6 +     10286 T---------------A---T----------------G----------T--------T
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             1373  6 -     11661 T---------------A---T----------------G----------T--------T
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             6699  6 +     56096 T---------------A---T----------------G----------T--------T
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        29948  6 -     42470 T---------------A---T----------------G----------T--------T
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        46576  6 -     54384 T---------------A---T----------------G----------T--------T
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              18363  6 +     53719 T---------------G---T----------------T----------A--------T
i Helogale_parvula.HelPar_flattened_line_22962          C 0 I 3
s Hemitragus_hylocrius.HemHyl_scaffold_16669                28895  6 -     91191 T---------------G---T----------------T----------T--------T
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 284 I 3
s Heterocephalus_glaber.JH602058.1                        2552215  6 +  31725842 t---------------t---t----------------t----------t--------t
i Heterocephalus_glaber.JH602058.1                      C 0 I 3
s Hippopotamus_amphibius.HipAmp_scaffold_1308              148238  6 +    277961 T---------------A---T----------------T----------T--------T
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 I 3
s Hipposideros_armiger.JXIK01001085.1                      279524  8 -    477199 T---------------GTG-T----------------T----------T--------T
i Hipposideros_armiger.JXIK01001085.1                   C 0 I 3
s Hipposideros_galeritus.HipGal_scaffold_345408               521  8 -       919 T---------------GTG-T----------------T----------T--------T
i Hipposideros_galeritus.HipGal_scaffold_345408         C 0 I 3
s Hoolock_leuconedys.ctg79                                      6497  6 -   7690867 T---------------A---C----------------A----------T--------T
i Hoolock_leuconedys.ctg79                                 C 0 I 23
s Hyaena_hyaena.HyaHya_flattened_line_20729                 18434  6 -     67322 T---------------G---T----------------T----------A--------T
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 I 3
s Hylobates_abbotti.k141_164775                              1280  6 -      2073 T---------------A---C----------------A----------T--------T
i Hylobates_abbotti.k141_164775                         C 0 C 0
s Hylobates_agilis.k141_1362131                               289  6 +      1075 T---------------A---C----------------A----------T--------T
i Hylobates_agilis.k141_1362131                         C 0 C 0
s Hylobates_klossii.k141_183401                               833  6 -      1272 T---------------A---C----------------A----------T--------T
i Hylobates_klossii.k141_183401                         I 11 C 0
s Hylobates_pileatus_b.ContigUN                                 14626185  6 -  25970782 T---------------A---C----------------A----------T--------T
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_950183                              881  6 +      2027 T---------------A---C----------------A----------T--------T
i Hylobates_muelleri.k141_950183                        C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             35345  6 -     60944 T---------------A---C----------------A----------T--------T
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     7292  6 +     22540 T---------------A---T----------------T----------T--------T
i Hystrix_cristata.HysCri_scaffold_50788                C 0 I 1
s Ictidomys_tridecemlineatus.JH393315.1                   7126975  4 +  13083262 --------------------g----------------t----------t--------t
i Ictidomys_tridecemlineatus.JH393315.1                 I 1 I 3
s Indri_indri.k141_5141390                                   1426  6 -      3181 C---------------A---T----------------G----------T--------T
i Indri_indri.k141_5141390                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              10151  3 +     17520 T---------------G---T-------------------------------------
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 I 196
s Kogia_breviceps.KogBre_flattened_line_35920               24753  3 +     37189 T---------------G---T-------------------------------------
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 I 197
s Lagothrix_lagothricha.k141_12968                          51398  6 -    147782 T---------------A---T----------------G----------A--------T
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    4751  8 +     26176 T---------------ATG-T----------------T----------T--------T
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 I 3
s Lemur_catta.scaffold_1                                258408251  6 - 285822530 T---------------A---T----------------G----------T--------T
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        25002  6 +     39228 T---------------A---T----------------G----------T--------T
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            54388  6 +     63517 T---------------A---T----------------G----------T--------T
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        79650  6 +    116806 T---------------A---T----------------G----------T--------T
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     32641  6 -     33031 T---------------A---T----------------G----------T--------T
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3087115  6 -   3498232 T---------------G---T----------------T----------A--------T
i Leptonychotes_weddellii.KB714749.1                    C 0 I 3
s Lepus_americanus.LepAme_scaffold_62849                    14446  6 +     22452 T---------------G---T----------------T----------T--------T
i Lepus_americanus.LepAme_scaffold_62849                C 0 I 3
s Lipotes_vexillifer.KE558548.1                            137107  3 +   3060487 t---------------g---t-------------------------------------
i Lipotes_vexillifer.KE558548.1                         C 0 I 196
s Lophocebus_aterrimus.ctg55                             19249844  6 +  19376315 T---------------A---T----------------G----------T--------T
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           11688  6 +     84689 G---------------A---T----------------G----------T--------T
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3779437  6 +   6799190 G---------------A---T----------------G----------T--------T
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20595948  6 -  62548349 T---------------G---T----------------T----------T--------T
i Loxodonta_africana.GL010040.1                         I 2 I 3
s Lycaon_pictus.CM007556.1                               11089512  6 +  39895028 G---------------G---t----------------t----------a--------t
i Lycaon_pictus.CM007556.1                              C 0 I 3
s Macaca_arctoides.k141_2201161                             21601  6 +     74745 T---------------A---T----------------G----------T--------T
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12708061  6 +  12821369 T---------------A---T----------------G----------T--------T
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                 639  6 -     26467 T---------------A---T----------------G----------T--------T
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           48506  6 +     63263 T---------------A---T----------------G----------T--------T
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                  616  6 -     26361 T---------------A---T----------------G----------T--------T
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 3793  6 -      7381 T---------------A---T----------------G----------T--------T
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  47031  6 -     79256 T---------------A---T----------------G----------T--------T
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196037133  6 + 196197964 t---------------a---t----------------g----------t--------t
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11447299  6 +  11645122 t---------------a---t----------------g----------t--------t
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   5985  6 -     46448 T---------------A---T----------------G----------T--------T
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                3651  6 -     13212 T---------------A---T----------------G----------T--------T
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 17328  6 -     55006 T---------------A---T----------------G----------T--------T
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43842434  6 +  43892939 T---------------A---T----------------G----------T--------T
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               18615  6 -     24607 T---------------A---T----------------G----------T--------T
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               5982  6 -     27140 T---------------A---T----------------G----------T--------T
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                702107  8 +    802869 T---------------ACA-T----------------T----------T--------A
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 I 3
s Mandrillus_leucophaeus.scaffold125                     43439016  6 -  43563597 T---------------A---T----------------G----------T--------T
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4451830  6 -   4543643 T---------------A---T----------------G----------T--------T
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            147189  6 +    252755 T---------------G---T----------------T----------T--------T
i Manis_javanica.JSZB01003966.1                         C 0 I 3
s Manis_pentadactyla.KN017078.1                             37332  6 +     58827 t---------------g---t----------------t----------t--------t
i Manis_pentadactyla.KN017078.1                         C 0 I 3
s Marmota_marmota.CZRN01000005.1                         36874882  4 +  64221397 --------------------g----------------t----------t--------t
i Marmota_marmota.CZRN01000005.1                        I 1 I 3
s Mellivora_capensis.MelCap_flattened_line_15433             2153  4 -     87323 --------------------T----------------T----------T--------T
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 I 3
s Meriones_unguiculatus.MerUng_scaffold_52233               14502  6 +     15977 T---------------A---T----------------T----------T--------G
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 I 3
s Mesocricetus_auratus.KB708139.1                         1048191  2 -  26018355 ------------------------------------------------g--------t
i Mesocricetus_auratus.KB708139.1                       I 2 I 3
s Mesoplodon_bidens.MesBid_scaffold_475714                    254  3 +       551 T---------------G---T-------------------------------------
i Mesoplodon_bidens.MesBid_scaffold_475714              C 0 I 201
s Microcebus_murinus.CM007691.1                          16511283  6 +  47401472 t---------------a---t----------------g----------t--------t
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  39434  6 -     48017 C---------------A---C----------------T----------T--------T
i Microgale_talazaci.MicTal_scaffold_34660              I 2 I 3
s Micronycteris_hirsuta.MicHir_scaffold_37978               24001  8 -     32043 T---------------ATG-T----------------C----------T--------T
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 I 3
s Microtus_ochrogaster.CM001673.1                        22820923 16 -  98408828 T---------------A---T----------------TGATTAGTAGAT--------T
i Microtus_ochrogaster.CM001673.1                       C 0 I 3
s Miniopterus_natalensis.LDJU01000022.1                   8212113  8 +  10048721 T---------------ATG-T----------------T----------T--------T
i Miniopterus_natalensis.LDJU01000022.1                 C 0 I 3
s Miniopterus_schreibersii.MinSch_scaffold_24116            36602  8 +     45743 T---------------GTG-T----------------T----------T--------T
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 I 3
s Miopithecus_ogouensis.k141_2935907                         3577  6 +     29742 T---------------A---T----------------G----------T--------T
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        12642  6 -    104932 T---------------G---T----------------T----------A--------T
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 I 3
s Mirza_zaza.k141_226143                                     6672  6 +      8497 T---------------A---T----------------G----------T--------T
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 147535  3 +    154973 T---------------G---T-------------------------------------
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 I 195
s Mormoops_blainvillei.MorMeg_scaffold_2952                162541  8 +    265003 T---------------ATG-T----------------T----------T--------T
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 I 3
s Moschus_moschiferus.MosMos_scaffold_78805                  2913  6 -     19904 T---------------G---C----------------T----------T--------T
i Moschus_moschiferus.MosMos_scaffold_78805             I 286 I 3
s Mungos_mungo.MunMun_flattened_line_8729                  146062  6 -    168139 T---------------G---T----------------T----------A--------T
i Mungos_mungo.MunMun_flattened_line_8729               C 0 I 3
s Murina_feae.MurFea_scaffold_2254                          23556  8 -    100666 T---------------GTA-T----------------T----------T--------T
i Murina_feae.MurFea_scaffold_2254                      C 0 I 3
s Muscardinus_avellanarius.MusAve_scaffold_9643             13412  6 +     98495 T---------------G---C----------------T----------T--------T
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 I 3
s Mustela_putorius.JH417978.1                             4425518  4 -  28371801 --------------------t----------------t----------a--------t
i Mustela_putorius.JH417978.1                           C 0 I 3
s Myocastor_coypus.MyoCoy_scaffold_3653                     91516  6 -    117718 T---------------G---T----------------T----------T--------T
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 I 3
s Myotis_brandtii.KE161952.1                               970421  8 +   8389877 t---------------aag-t----------------t----------t--------t
i Myotis_brandtii.KE161952.1                            C 0 I 3
s Myotis_davidii.KB114863.1                               5021846  8 +   6462685 t---------------aag-t----------------t----------t--------t
i Myotis_davidii.KB114863.1                             C 0 I 3
s Myotis_lucifugus.GL429887.1                             3467924  8 -   3747815 t---------------aag-t----------------t----------t--------t
i Myotis_lucifugus.GL429887.1                           C 0 I 3
s Myotis_myotis.MyoMyo_scaffold_6123                        13167  8 +     66751 T---------------A-AGT----------------T----------T--------T
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 I 3
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             6171  6 -      8794 G---------------G---T----------------T----------T--------T
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        I 2 I 3
s Nasalis_larvatus.k141_153429                              10054  6 +     48152 T---------------A---T----------------G----------T--------T
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4486032  6 -  14209539 T---------------G---T----------------T----------A--------T
i Neomonachus_schauinslandi.NINY01007774.1              C 0 I 3
s Neophocaena_asiaeorientalis.KZ688543.1                  3952147  3 -   4490290 t---------------g---t-------------------------------------
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 I 195
s Nomascus_annamensis.k141_224620                             651  6 -      2316 T---------------A---C----------------A----------T--------T
i Nomascus_annamensis.k141_224620                       C 0 C 0
s Nomascus_concolor.k141_226614                              2748  6 -      5092 T---------------A---C----------------A----------T--------T
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_1032971                            322  6 -      1918 T---------------A---C----------------A----------T--------T
i Nomascus_gabriellae.k141_1032971                      C 0 I 23
s Nomascus_siki_b.tarseq_80                             26500  6 -  18771707 T---------------A---C----------------A----------T--------T
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  4170  6 +      4512 T---------------A---C----------------A----------T--------T
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                32296  6 +   3668941 G---------------G---t----------------t----------a--------t
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 I 3
s Nycticebus_bengalensis.LG16                            65568142  6 -  95554990 G---------------A---T----------------G----------T--------T
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            4868  6 +      6470 G---------------A---T----------------G----------T--------T
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65670475  6 +  89412551 G---------------A---T----------------G----------T--------T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Octodon_degus.JH651621.1                                3687016  6 +  10294119 t---------------g---t----------------t----------t--------t
i Octodon_degus.JH651621.1                              C 0 I 3
s Odobenus_rosmarus.KB229369.1                             680694  6 -   3126709 T---------------G---T----------------T----------A--------T
i Odobenus_rosmarus.KB229369.1                          C 0 I 3
s Odocoileus_virginianus.KZ101650.1                       1081085  6 +   1425656 t---------------t---t----------------t----------t--------t
i Odocoileus_virginianus.KZ101650.1                     I 283 I 3
s Okapia_johnstoni.LVCL01S0017931.1                         38388  6 +     78940 t---------------g---t----------------t----------t--------t
i Okapia_johnstoni.LVCL01S0017931.1                     I 285 I 3
s Ondatra_zibethicus.OndZib_scaffold_6821                  126188 16 +    145789 T---------------G---T----------------TGATTAGTACAT--------T
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 I 3
s Onychomys_torridus.OnyTor_scaffold_12578                  38368 20 +     62360 T---------------A---TAGATAAGTAGATTAATT--------------------
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 I 4
s Orcinus_orca.KB316965.1                                 7225832  3 -   7562323 t---------------g---t-------------------------------------
i Orcinus_orca.KB316965.1                               C 0 I 195
s Orycteropus_afer.OryAfe_flattened_line_13509              61065  6 -     66828 T---------------A---T----------------T----------T--------T
i Orycteropus_afer.OryAfe_flattened_line_13509          I 2 I 2
s Oryctolagus_cuniculus.CM000803.1                      141877484  6 + 163896628 t---------------g---t----------------t----------t--------t
i Oryctolagus_cuniculus.CM000803.1                      C 0 I 3
s Otocyon_megalotis.JAEUCK010005121.1                      309589  6 -    505867 G---------------G---t----------------t----------a--------t
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 I 3
s Otolemur_crassicaudatus.k141_505435                        1781  6 -     53940 G---------------A---T----------------G----------T--------T
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18009762  6 -  38779656 G---------------A---T----------------G----------T--------T
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134078687  6 - 275406953 t---------------g---t----------------t----------t--------t
i Ovis_aries.CM001582.2                                 I 285 I 3
s Ovis_canadensis.OviCan_scaffold_6251                      79901  6 +    140051 T---------------G---T----------------T----------T--------T
i Ovis_canadensis.OviCan_scaffold_6251                  I 284 I 3
s Panthera_onca.PanOnc_flattened_line_1615                  35451  6 +    295523 T---------------G---T----------------T----------A--------T
i Panthera_onca.PanOnc_flattened_line_1615              C 0 I 3
s Panthera_pardus.KV860323.1                              3639201  6 +  18214204 T---------------G---T----------------T----------A--------T
i Panthera_pardus.KV860323.1                            C 0 I 3
s Panthera_tigris.KE721879.1                              5028877  6 -   6340057 T---------------G---T----------------T----------A--------T
i Panthera_tigris.KE721879.1                            C 0 I 3
s Pantholops_hodgsonii.KE114631.1                         1067536  6 -   1292953 t---------------g---t----------------t----------t--------t
i Pantholops_hodgsonii.KE114631.1                       I 285 I 3
s Papio_anubis.CM001492.2                               188157810  6 - 188283584 t---------------a---t----------------g----------t--------t
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                               902  6 +     25005 T---------------A---T----------------G----------T--------T
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47515187  6 +  47705337 T---------------A---T----------------G----------T--------T
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 69177  6 -    104429 T---------------A---T----------------G----------T--------T
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    7706  6 +     14967 T---------------A---T----------------G----------T--------T
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 3571  6 -      7628 T---------------A---T----------------G----------T--------T
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    116939  6 -    135482 T---------------G---T----------------T----------A--------T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 I 3
s Perodicticus_ibeanus.k141_117958                           6466  6 -     23713 G---------------A---T----------------G----------T--------T
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            25779  6 -     27972 G---------------A---T----------------G----------T--------T
i Perodicticus_potto.k141_713187                        C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4951304  3 -   8017169 t---------------t---t-------------------------------------
i Peromyscus_maniculatus.KI615518.1                     C 0 I 473
s Petromus_typicus.PetTyp_scaffold_33007                    14740  6 -     36578 T---------------T---T----------------T----------A--------A
i Petromus_typicus.PetTyp_scaffold_33007                C 0 I 3
s Phocoena_phocoena.PhoPho_flattened_line_53071               289  3 +      8220 T---------------G---T-------------------------------------
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 I 196
s Piliocolobus_badius.k141_1987485                           3587  6 -      5908 T---------------A---T----------------G----------T--------T
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       4205  6 -     17985 T---------------A---T----------------G----------T--------T
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            3572  6 +      7694 T---------------A---T----------------G----------T--------T
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26742056  6 +  26888534 t---------------a---t----------------g----------t--------t
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pithecia_albicans.k141_991845                             45003  7 -     61926 ----------------A---TA--T------------G----------T--------T
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        26386  7 +     78826 ----------------A---TA--T------------G----------T--------T
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                             10434  7 -     15800 ----------------A---TA--T------------G----------T--------T
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        13633  7 -     16101 ----------------A---TA--T------------G----------T--------T
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          6862  7 +      9673 ----------------A---TA--T------------G----------T--------T
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13475862  7 -  19735023 ----------------A---TA--T------------G----------T--------T
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           14765  7 -     31692 ----------------A---TA--T------------G----------T--------T
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           6753  3 +     21690 T---------------G---T-------------------------------------
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 I 194
s Plecturocebus_bernhardi.k141_959214                       24099  4 +     44506 --------------------T----------------G----------T--------T
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        24312  4 +     67491 --------------------T----------------G----------T--------T
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      14551  4 -     98129 --------------------T----------------G----------T--------T
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     24151  4 +    147771 --------------------T----------------G----------T--------T
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                          787  4 -     43940 --------------------T----------------G----------T--------T
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          4870  4 -     55515 --------------------T----------------G----------T--------T
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         24224  4 +    152463 --------------------T----------------G----------T--------T
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       1941  4 -    119457 --------------------T----------------G----------T--------T
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         13947  4 +    134592 --------------------T----------------G----------T--------T
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          24534  4 -     75465 --------------------T----------------G----------T--------T
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              188692  6 -    373494 t---------------a---t----------------g----------t--------t
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19809339  6 +  19899266 T---------------A---T----------------G----------T--------T
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               7334  6 -     15069 T---------------A---T----------------G----------T--------T
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              7449  6 +     14865 T---------------A---T----------------G----------T--------T
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6849622  6 +  12164890 T---------------A---T----------------G----------T--------T
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     19796  6 -     30946 n---------------n---n----------------n----------n--------n
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         4701  6 +     11805 T---------------A---T----------------G----------T--------T
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           44049  6 +     52369 T---------------A---T----------------G----------T--------T
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         36436  6 -     44753 T---------------A---T----------------G----------T--------T
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            18359  6 +     27322 T---------------A---T----------------G----------T--------T
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       17993  6 -     53241 T---------------A---T----------------G----------T--------T
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         40257  6 -     48185 T---------------A---T----------------G----------T--------T
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           36590  6 +     77221 t---------------a---t----------------t----------t--------g
i Psammomys_obesus.NESX01026517.1                       C 0 I 3
s Pteronotus_parnellii.KE867983.1                            5190  8 -     27784 C---------------ATG-T----------------T----------T--------T
i Pteronotus_parnellii.KE867983.1                       C 0 I 3
s Pteronura_brasiliensis.PteBra_flattened_line_1343        247830  4 -    344369 --------------------T----------------T----------A--------T
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 I 3
s Pteropus_alecto.KB031157.1                             13247111  8 -  17261082 t---------------aca-t----------------t----------t--------a
i Pteropus_alecto.KB031157.1                            C 0 I 3
s Pteropus_vampyrus.KN525959.1                             605061  8 -   3946241 t---------------aca-t----------------t----------t--------a
i Pteropus_vampyrus.KN525959.1                          C 0 I 3
s Puma_concolor.QAVW01000427.1                          131535472  6 - 161321710 T---------------G---T----------------T----------A--------T
i Puma_concolor.QAVW01000427.1                          C 0 I 3
s Pygathrix_cinerea.k141_374971                             31438  6 +     56732 T---------------A---T----------------G----------T--------T
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6807932  6 +   6970761 T---------------A---T----------------G----------T--------T
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             7325  6 +     18040 T---------------A---T----------------G----------T--------T
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                17197  6 +     68503 T---------------T---T----------------T----------T--------T
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 283 I 3
s Rhinolophus_sinicus.LVEH01000179.1                      1788990  8 +   2252614 T---------------AGG-T----------------T----------G--------T
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 I 3
s Rhinopithecus_bieti.k119_554384                            1721  6 -     17045 T---------------A---T----------------G----------C--------T
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206379209  6 - 206558726 T---------------A---T----------------G----------C--------T
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44858111  6 -  45163003 T---------------A---T----------------G----------C--------T
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                20449  8 +    109198 T---------------GCA-T----------------T----------T--------A
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 I 3
s Saiga_tatarica.SaiTat_scaffold_82192                       9363  6 +     12214 T---------------G---T----------------T----------T--------T
i Saiga_tatarica.SaiTat_scaffold_82192                  I 285 I 3
s Saimiri_boliviensis.NW_024100938.1                     15673951  6 -  43202129 t---------------a---t----------------g----------t--------t
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        5864  6 +     34089 T---------------A---T----------------G----------T--------T
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              5806  6 -     60842 T---------------A---T----------------G----------T--------T
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              5899  6 +     67014 T---------------A---T----------------G----------T--------T
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              5877  6 +     60816 T---------------A---T----------------G----------T--------T
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 5814  6 -     76454 T---------------A---T----------------G----------T--------T
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17342546  6 -  30362882 T---------------A---T----------------G----------T--------C
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         21907  6 -     62485 T---------------A---T----------------G----------T--------C
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   37826  5 -    114521 ----------------G---T----------------T----------T--------C
i Scalopus_aquaticus.ScaAqu_scaffold_9300               I 20 I 3
s Semnopithecus_entellus.k141_1572367                        4941  6 +     15331 T---------------A---T----------------G----------C--------T
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      10316  6 +     20762 T---------------A---T----------------G----------C--------T
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         120321  6 +    130994 T---------------A---T----------------G----------C--------T
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           39100  6 +     46263 T---------------A---T----------------G----------C--------T
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     32245  6 +     42640 T---------------A---T----------------G----------C--------T
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        15267  6 +     30600 T---------------A---T----------------G----------C--------T
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  101535 16 -    120886 T---------------A---T----------------TGA--------TTAGTACACT
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 I 3
s Solenodon_paradoxus.SolPar_flattened_line_1012            20011  6 +    739146 T---------------A---T----------------T----------T--------T
i Solenodon_paradoxus.SolPar_flattened_line_1012        I 7 I 3
s Sorex_araneus.JH798170.1                               17767567 21 -  27805282 TTGACCaatgaaatatg---t----------------t----------t--------t
i Sorex_araneus.JH798170.1                              I 7 I 3
s Spermophilus_dauricus.KZ294190.1                        2240891  4 +   2842873 --------------------g----------------t----------t--------t
i Spermophilus_dauricus.KZ294190.1                      I 1 I 3
s Spilogale_gracilis.SpiGra_flattened_line_905             236205  6 -    276980 T---------------G---T----------------T----------A--------T
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 I 3
s Suricata_suricatta.SurSur_flattened_line_20339            28721  6 +     62062 T---------------G---T----------------T----------A--------T
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 I 3
s Sus_scrofa.CM000824.4                                 189273223  6 + 218635234 t---------------g---t----------------t----------t--------t
i Sus_scrofa.CM000824.4                                 C 0 I 3
s Symphalangus_syndactylus.tarseq_24                        16444  6 -  13920577 T---------------A---C----------------A----------T--------T
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                1419  8 +     20549 T---------------ATG-T----------------T----------T--------T
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 I 3
s Tamandua_tetradactyla.TamTet_scaffold_26877               15837  6 +     45698 G---------------T---T----------------T----------T--------T
i Tamandua_tetradactyla.TamTet_scaffold_26877           I 2 I 3
s Tapirus_indicus.TapInd_scaffold_176                      808272  6 +   1148477 T---------------G---T----------------T----------T--------A
i Tapirus_indicus.TapInd_scaffold_176                   C 0 I 3
s Tapirus_terrestris.TapTer_scaffold_14939                  58985  6 +     99546 T---------------G---T----------------T----------T--------A
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 I 3
s Theropithecus_gelada.CM009951.1                       194009338  6 - 194193292 t---------------a---t----------------g----------t--------t
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             40097  6 -     47444 T---------------T---A----------------A----------A--------A
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 I 4
s Tolypeutes_matacus.TolMat_scaffold_1305119                   27  6 -       594 G---------------G---T----------------T----------T--------T
i Tolypeutes_matacus.TolMat_scaffold_1305119            I 2 I 3
s Tonatia_saurophila.TonSau_scaffold_3334                  137165  8 -    259118 T---------------ATG-T----------------T----------T--------T
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 I 3
s Trachypithecus_auratus.k141_738098                        28588  6 +     38948 T---------------A---C----------------G----------C--------T
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   22148  6 -     32910 T---------------A---T----------------G----------C--------T
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      4049  6 -     12939 T---------------A---C----------------G----------C--------T
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       3477  6 -     14244 T---------------A---T----------------G----------C--------T
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           44875  6 -     54611 T---------------A---T----------------G----------C--------T
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        2671  6 -     11566 T---------------A---T----------------G----------C--------T
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     4855  6 -     15592 T---------------A---T----------------G----------C--------T
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          3507  6 +     14371 T---------------A---T----------------G----------C--------T
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   1793  6 +     12481 T---------------A---T----------------G----------C--------T
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        1774  6 -     24393 T---------------A---T----------------G----------C--------T
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       6918  6 -     28054 T---------------A---T----------------G----------C--------T
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44661702  6 -  44834318 T---------------A---T----------------G----------C--------T
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       4019  6 +     13828 T---------------A---T----------------G----------C--------T
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   6557  6 +     90398 A---------------G---T----------------T----------T--------T
i Tragulus_javanicus.TraJav_scaffold_14717              I 289 I 3
s Trichechus_manatus.JH594618.1                          16086962  6 +  31416278 T---------------G---T----------------T----------T--------T
i Trichechus_manatus.JH594618.1                         I 2 I 3
s Tupaia_chinensis.KB320831.1                             2794593  6 -   3938065 T---------------G---T----------------T----------T--------C
i Tupaia_chinensis.KB320831.1                           I 2 I 3
s Tupaia_tana.TupTan_flattened_line_68454                    6697  6 +     13056 T---------------G---T----------------T----------T--------T
i Tupaia_tana.TupTan_flattened_line_68454               I 2 I 3
s Tursiops_truncatus.MRVK01000923.1                      69314548  3 -  96451834 t---------------g---t-------------------------------------
i Tursiops_truncatus.MRVK01000923.1                     C 0 I 196
s Uropsilus_gracilis.UroGra_scaffold_69449                   8394  6 +     10241 T---------------A---C----------------T----------T--------T
i Uropsilus_gracilis.UroGra_scaffold_69449              I 21 I 3
s Ursus_maritimus.KK498671.1                              6515950  6 +  28682327 t---------------g---t----------------t----------a--------t
i Ursus_maritimus.KK498671.1                            C 0 I 3
s Varecia_rubra.k141_432109                                  6257  6 -     20643 T---------------A---T----------------G----------T--------T
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             25792  6 -     33872 T---------------A---T----------------G----------T--------T
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1525763  6 -   2331223 t---------------g---t----------------t----------t--------t
i Vicugna_pacos.KN269600.1                              C 0 I 3
s Vulpes_lagopus.VulLag_flattened_line_2045                139691  6 -    281493 G---------------G---T----------------T----------A--------T
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 I 3
s Xerus_inauris.XerIna_scaffold_7898                       128009  4 -    134049 --------------------T----------------T----------T--------T
i Xerus_inauris.XerIna_scaffold_7898                    I 1 I 3
s Zalophus_californianus.ZalCal_flattened_line_4097        215429  6 -    227762 T---------------G---T----------------T----------A--------T
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 I 3
s Zapus_hudsonius.ZapHud_scaffold_64392                     16950  6 -     20485 T---------------G---T----------------T----------T--------T
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 I 605
s Ziphius_cavirostris.ZipCav_flattened_line_127025           8040  3 -      8775 T---------------G---T-------------------------------------
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 I 202
e Ochotona_princeps.JH802095.1                            4996729 2205 -  23139505 I
e Perognathus_longimembris.PerPac_flattened_line_19359        892 695 +     49596 I
e Dipodomys_ordii.KN672545.1                              3657363 894 +   4240102 I
e Procavia_capensis.ProCapCap_scaffold_149274                2467 1156 -      9567 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Megaderma_lyra.MegLyr_scaffold_3562                       64783 239 -    234502 I
e Heterohyrax_brucei.HetBruBak_scaffold_25354               61360 1157 +     73687 I
e Echinops_telfairi.JH980316.1                           22999931  2 -  44670279 I
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1008 325 -      5782 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19677 266 -    119109 I
e Jaculus_jaculus.JH727545.1                                 2310  1 -      4668 I
e Tarsius_wallacei.k141_48636                               60532 3805 +     65473 I
e Tarsius_lariang.k141_609102                               27216 3812 +     42269 I
e Rattus_norvegicus.chr11                                13915860 1475 +  90463843 I
e Nannospalax_galili.KL201303.1                            119252 614 +    362372 I
e Mus_spretus.CM004110.1                                 74333573 2703 +  97876770 I
e Mus_pahari.LT608305.1                                  67557037 2889 +  89017189 I
e Mus_musculus.chr16                                     75490838 2711 +  98207768 I
e Mus_caroli.LT608236.1                                  70767758 3738 +  92629107 I
e Dolichotis_patagonum.DolPat_scaffold_14102                36772 276 -     73477 I
e Dasyprocta_punctata.DasPun_flattened_line_634             59553 276 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                18462 277 +     26546 I
e Ctenodactylus_gundi.CteGun_scaffold_447                  209506 3013 -    956709 I
e Cephalopachus_bancanus.k141_702587                         8788 3391 +     21754 I
e Cavia_tschudii.CavTsc_scaffold_488                       177453 271 +    436027 I
e Cavia_porcellus.DS562889.1                             15799262 290 -  24440124 I
e Cavia_aperea.AVPZ01000278.1                            15787326 288 -  24422027 I
e Carlito_syrichta.NW_007248099.1                          309764 3411 +    345090 I
e Pan_paniscus.CM003386.1                               127575888 480 - 205426864 I
e Pan_troglodytes.CM009241.2                            120153042 480 - 196562556 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               15099 23 +    209709 TT-AAATGAAACTTCTCCAA--TAT-A
s Acinonyx_jubatus.LLWD01000356.1                         2035121 18 +   3721120 TT-AAA-----TGCTCTTAA--GAT-A
i Acinonyx_jubatus.LLWD01000356.1                       I 3 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    114978 18 -    189883 AT-AAA-----ATTCTTTAC--AAT-C
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 3 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10658688 18 +  23371972 tt-aaa-----tgCTCTTAA--GAT-A
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 3 C 0
s Ailurus_fulgens.LNAC01000003.1                          7095822 18 -  16596857 TT-AAA-----TGCTCTTGA--AAT-A
i Ailurus_fulgens.LNAC01000003.1                        I 3 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   19357 18 -     22067 tt-gta-----tttctTTAA--GAT-G
i Allactaga_bullata.AllBul_scaffold_70162               I 3 C 0
s Allenopithecus_nigroviridis.k141_2469532                   2826 23 -     60446 TT-AAATTAAACTTCTTCAA--GAT-A
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         3543 23 -     29318 TT-AAATTAAACTTCTTCAA--GAT-A
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         2479 23 +     38766 TT-AAATTAAACTTCTTCAA--GAT-A
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          3437 23 -     80423 TT-AAATTAAACTTCTTCAA--GAT-A
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            11424 23 -     18050 TT-AAATTATACTTCTTTAA--GAT-A
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_1710068                               1140 23 +      1555 TT-AAATTATACTTCTTTAA--GAT-A
i Alouatta_caraya.k141_1710068                          C 0 C 0
s Alouatta_discolor.k141_811576                             12097 23 -     21359 TT-AAATTATACTTCTTTAA--GAT-A
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                1720 23 +      2129 TT-AAATTATACTTCTTTAA--GAT-A
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_2177643                          1097 23 -      1868 TT-AAATTATACTTCTTTAA--GAT-A
i Alouatta_macconnelli.k141_2177643                     C 0 C 0
s Alouatta_nigerrima.k141_3537692                            1146 23 +      1660 TT-AAATTATACTTCTTTAA--GAT-A
i Alouatta_nigerrima.k141_3537692                       C 0 C 0
s Alouatta_palliata.k141_2764429                             1066 23 -      1480 TT-AAATTATACTTCCTTAA--GAT-G
i Alouatta_palliata.k141_2764429                        C 0 C 0
s Alouatta_puruensis.k141_131505                              353 23 +      4855 TT-AAATTATACTTCTTTAA--GAT-A
i Alouatta_puruensis.k141_131505                        C 0 C 0
s Alouatta_seniculus.k141_1531728                            1281 23 -      1692 TT-AAATTATACTTCTTTAA--GAT-A
i Alouatta_seniculus.k141_1531728                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3521545 18 +   4113121 tt-aaa-----tgtccTTAA--GAT-G
i Ammotragus_lervia.NIVO01013474.1                      I 3 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      391634 19 -    631301 TT-AAA-----TGTCCTTAA--GTGAA
i Anoura_caudifer.AnoCau_scaffold_422                   I 3 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            32129 18 +     33004 TT-AAA-----TATCCTTAA--GAT-G
i Antilocapra_americana.AntAmePen_scaffold_42841        I 3 C 0
s Aotus_azarae.k141_3170768                                 63767 23 +     78111 TT-AAATTATACTTCTTTAA--GAT-A
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            6710 23 +     22701 TT-AAATTATATTTCTTTAA--GAT-A
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5750667 23 +   9889416 tt-aaattatacttctttAA--GAT-A
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             7256 23 -    104377 TT-AAATTATACTTCTTTAA--GAT-A
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               7258 23 +     23246 TT-AAATTATACTTCTTTAA--GAT-A
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_231055                     1153 15 -      2492 TT-AAT-----CTTTA---A--GAT-A
i Aplodontia_rufa.AprRuf_scaffold_231055                I 3 C 0
s Arctocebus_calabarensis.k141_587554                        2066 18 +      9265 TT-AAA-----CTTCCTGAA--GAT-A
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                10051 19 -     29036 TT-AAA-----TGTCCTTAA--GGGAA
i Artibeus_jamaicensis.ArtJam_scaffold_41619            I 3 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9540533 23 +  39197703 TT-AAATTATACTTCTTCAA--GAT-A
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             61806 23 +     85812 TT-AAATTATACTTCTTTAA--GAT-A
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                12819 23 +     89302 TT-AAATTATACTTCTTTAA--GAT-A
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             17320 23 -     58268 TT-AAATTATACTTCTTCAA--GAT-A
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             65314 23 +    119057 TT-AAATTATACTTCTTTAA--GAT-A
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               7283 23 -     25888 TT-AAATTATACTTCTTTAA--GAT-A
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 7799 18 -     16375 TT-GAA-----CTTCCTGAA--GAT-A
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               1415 18 +      6337 TT-GAA-----CTTCCTGAA--GAT-A
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26381519 14 +  51448160 -----A-----TGTCCTTAA--GAT-A
i Balaenoptera_acutorostrata.KI537095.1                 I 199 C 0
s Balaenoptera_bonaerensis.DF502048.1                        6692 14 -     13118 -----A-----TGTCCTTAA--GAT-A
i Balaenoptera_bonaerensis.DF502048.1                   I 200 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   44651 18 -     72089 TT-AAA-----TGTCCTTAA--GAT-G
i Beatragus_hunteri.BeaHun_scaffold_21644               I 3 C 0
s Bison_bison.KN264915.1                                  6561272 18 +   6870073 tt-aaa-----tgtccTGAA--GAT-G
i Bison_bison.KN264915.1                                I 3 C 0
s Bos_indicus.CM003021.1                                138141394 18 - 161108492 tt-aaa-----tgtccTGAA--GAT-G
i Bos_indicus.CM003021.1                                I 3 C 0
s Bos_mutus.JH883513.1                                     573924 18 -    998990 tt-aaa-----tgtccTGAA--GAT-G
i Bos_mutus.JH883513.1                                  I 3 C 0
s Bos_taurus.CM000177.6                                 136297127 18 - 158972876 tt-aaa-----tgtccTGAA--GAT-G
i Bos_taurus.CM000177.6                                 I 3 C 0
s Bubalus_bubalis.KI419065.1                              1234208 18 -   1914593 tt-aaa-----tgtccTGAA--GAT-G
i Bubalus_bubalis.KI419065.1                            I 3 C 0
s Cacajao_ayresi.k141_724503                               115167 23 -    171031 TT-AAATTATACTTCTTTAT--GAT-A
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 14196 23 +    125063 TT-AAATTATACTTCTTTAT--GAT-A
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                16239 23 -    216513 TT-AAATTATACTTCTTTAT--GAT-A
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        8782 23 -    134917 TT-AAATTATACTTCTTTAT--GAT-A
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3220667 18 -   8989139 tt-aaa-----tgtccTTAA--GAT-A
i Camelus_bactrianus.KN276303.1                         I 3 C 0
s Camelus_dromedarius.KN271192.1                           398368 18 -  15254737 tt-aaa-----tgtccTTAA--GAT-A
i Camelus_dromedarius.KN271192.1                        I 3 C 0
s Camelus_ferus.KB016973.1                                2974104 18 +   6889770 tt-aaa-----tgtccTTAA--GAT-A
i Camelus_ferus.KB016973.1                              I 3 C 0
s CanFam4.chr31                                          11520863 18 +  39901454 TT-AAA-----TGTTCTTAA--GAT-A
i CanFam4.chr31                                         I 3 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   15888 18 +     87036 TT-AAA-----TGTTCTTAA--GAT-A
i Canis_lupus_VD.CanFam_VD_scaffold_16982               I 3 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11267532 18 -  35597290 tt-aaa-----tgttcttAA--GAT-A
i Canis_lupus_dingo.QKWQ01001993.1                      I 3 C 0
s Canis_lupus_familiaris.chr31                           11090065 18 +  39895921 tt-aaa-----tgttcttAA--GAT-A
i Canis_lupus_familiaris.chr31                          I 3 C 0
s Canis_lupus_orion.HG994411.1                           16457078 18 -  44759192 tt-aaa-----tgttcttAA--GAT-A
i Canis_lupus_orion.HG994411.1                          I 3 C 0
s Capra_aegagrus.CM003214.1                              21326616 18 + 157394656 tt-aaa-----tgtccTTAA--GAT-G
i Capra_aegagrus.CM003214.1                             I 3 C 0
s Capra_hircus.CM004562.1                               135707844 18 - 157403528 tt-aaa-----tgtcCTTAA--GAT-G
i Capra_hircus.CM004562.1                               I 3 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               60838 19 +     67245 CT-AAA-----TGTCCTTAA--GGGAA
i Carollia_perspicillata.CarPer_scaffold_4436           I 3 C 0
s Castor_canadensis.CasCan_scaffold_47037                   32233 18 +     33760 TT-AAA-----TTTCTTAAA--GAT-A
i Castor_canadensis.CasCan_scaffold_47037               I 3 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   160274 18 -    276539 TG-AAA-----TACCCTTAA--GAT-A
i Catagonus_wagneri.CatWag_scaffold_1305                I 3 C 0
s Cebus_albifrons.Contig22                               18892007 23 -  29618158 TT-AAATTATAATTCTTTAA--GAT-A
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 9551 23 -     26817 TT-AAATTATAATTCTTTAA--GAT-A
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                13794 23 +     25043 TT-AAATTATAATTCTTTAA--GAT-A
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4365041 18 +   7569818 TT-AAA-----TGTCCTTAA--GAT-A
i Ceratotherium_simum.JH767818.1                        I 3 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         4798 18 -      9338 TT-AAA-----TGTCCTTAA--GAT-A
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    I 3 C 0
s Cercocebus_atys.KQ010443.1                              6556773 23 +   6739814 tt-aaattaaacttcTTCAA--GAT-A
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      28247 23 +     60454 TT-AAATTAAACTTCTTCAA--GAT-A
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          3454 23 -     21101 TT-AAATTAAACTTCTTCAA--GAT-A
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         60764 23 -    107033 TT-AAATTAAACTTCTTCAA--GAT-A
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        3643 23 -     17608 TT-AAATTAAACTTCTTCAA--GAT-A
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                           802 23 +     45019 TT-AAATTAAACTTCTTCAA--GAT-A
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                            886 23 +     15177 TT-AAATTAAACTTCTTCAA--GAT-A
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          3686 23 +     16677 TT-AAATTAAACTTCTTCAA--GAT-A
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           25856 23 +     35983 TT-AAATTAAACTTCTTCAA--GAT-A
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11992384 23 +  12117833 TT-AAATTAAACTTCTTCAA--GAT-A
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46479142 23 +  46592721 TT-AAATTAAACTTCTTCAA--GGT-A
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      42696 23 -     45581 TT-AAATTAAACTTCTTCAA--GAT-A
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       3698 23 +     35577 TT-AAATTAAACTTCTTCAA--GAT-A
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        3471 23 -     25661 TT-AAATTAAACTTCTTCAA--GAT-A
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        3450 23 -     17744 TT-AAATTAAACTTCTTCAA--GAT-A
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        23056 23 +     37128 TT-AAATTAAACTTCTTCAA--GAT-A
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           3881 18 -      6963 TC-AAA-----TGATTCAAA--TAT-A
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      I 3 I 20
s Cheirogaleus_major.k141_1157592                           60070 18 -     68416 TT-GAA-----CTTCCTGAA--GAT-A
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            9122 18 +     13308 TT-GAA-----CTTCCTGAA--GAT-A
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             6824 23 -     18223 TT-AAATTATACTTCTTTAA--GAT-A
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             23842 23 +     25473 TT-AAATTATACTTCTTTAA--GAT-A
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           42882 23 +     57117 TT-AAATTATACTTCTTTAA--GAT-A
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          47561 23 +     54541 TT-AAATTATACTTCTTTAA--GAT-A
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15962843 18 +  43084221 TT-AAA-----TCTCCTTAA--CAT-A
i Chinchilla_lanigera.JH721867.1                        I 3 C 0
s Chiropotes_israelita.k141_1189915                         72368 23 +    196370 TT-AAATTATACTTCTTTAT--GAT-A
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          16548 23 +     40510 TT-AAATTATACTTCTTTAT--TAT-A
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15141053 23 -  15256731 TT-AAATTAAACTTCTTCAA--GAT-A
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      35662 23 -     53260 TT-AAATTAAACTTCTTCAA--GAT-A
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101146221 23 + 101219884 tt-aaattaaacttcTTCAA--GAT-A
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                17641 18 -     21363 TC-AAA-----TGACCCTAA--GAT-A
i Choloepus_didactylus.ChoDid_scaffold_36182            I 3 C 0
s Choloepus_hoffmanni.KN194586.1                           762946 18 +    964067 ta-aaa-----tgaccCTAA--GAT-A
i Choloepus_hoffmanni.KN194586.1                        I 3 C 0
s Colobus_angolensis.KN985967.1                          10888213 20 +  10971483 TT-AAATTAAA---CTTCAA--GAT-A
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147666141 20 + 156195979 TT-AAATTAAA---CTTCAA--GAT-A
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            18124 20 +     23629 TT-AAATTAAA---CTTCAA--GAT-A
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60620699 18 +  78930452 tt-aaa-----tatctttca--aat-a
i Condylura_cristata.JH655880.1                         I 3 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 279492 18 -    399297 TT-AAA-----ATTCTTTAA--GAT-A
i Cricetomys_gambianus.CriGam_scaffold_949              I 3 C 0
s Cricetulus_griseus.LT883672.1                          53031598 17 +  72327488 TT-AAA-----ATTCTTTAA--GGC--
i Cricetulus_griseus.LT883672.1                         I 3 C 0
s Crocidura_indochinensis.CroInd_scaffold_848148              675 18 +      1327 TT-AAA-----TGTCTCTGA--GAT-A
i Crocidura_indochinensis.CroInd_scaffold_848148        I 3 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            53177 18 -     70449 TT-AAG-----TGCTCTTAT--GAT-A
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 3 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 32199 18 -     67205 TT-AAG-----CTTCATTAA--CAC-A
i Ctenomys_sociabilis.CteSoc_scaffold_19489             I 3 C 0
s Dasypus_novemcinctus.JH568778.1                          184750 18 -   6883506 ta-aaa-----tgactCAAA--TAT-A
i Dasypus_novemcinctus.JH568778.1                       I 3 C 0
s Daubentonia_madagascariensis.ctg11                     16845935 18 +  31942871 TT-GAA-----CTTCCTGAA--GAT-A
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80038143 14 -  96802777 -----A-----TGTCCTTAA--GAT-A
i Delphinapterus_leucas.KZ290064.1                      I 195 C 0
s Desmodus_rotundus.KZ672188.1                           18700129 19 -  18957592 tt-aaa-----actccTTAA--GTGAA
i Desmodus_rotundus.KZ672188.1                          I 3 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 323693 18 +    993696 TT-AAA-----TGTCCTTAA--GAT-A
i Dicerorhinus_sumatrensis.PEKH010003161.1              I 3 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   4345 10 +    151128 TT-AAA-----TGTCC-----------
i Diceros_bicornis.DicBicMic_scaffold_9545              I 3 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   158042 18 +    228994 TT-AAA-----ATTCCTCAC--CAT-T
i Dinomys_branickii.DinBra_scaffold_1996                I 3 C 0
s Eidolon_helvum.KE772537.1                                 13402 18 +     24177 tt-aaa-----tgtcctTAA--GAT-A
i Eidolon_helvum.KE772537.1                             I 3 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1492877 18 +   1727528 tt-aaa-----tgtcaTGAA--AAT-G
i Elaphurus_davidianus.JRFZ01086400.1                   I 3 C 0
s Elephantulus_edwardii.JH947210.1                        7829841 18 +  15467074 AT-AAA-----TGGTCCTAA--AAT-A
i Elephantulus_edwardii.JH947210.1                      I 1 I 5
s Ellobius_lutescens.LOEQ01003611.1                        240578 12 -    369425 ------------TTCCTTAA--GAT-A
i Ellobius_lutescens.LOEQ01003611.1                     I 10 C 0
s Ellobius_talpinus.LOJH01090055.1                           7753 18 -      7838 TT-AAC-----ATTCCTTAA--GAT-A
i Ellobius_talpinus.LOJH01090055.1                      I 3 C 0
s Enhydra_lutris.KZ291749.1                              85873261 18 +  99434291 tt-aaa-----tgctTTCAA--AAT-A
i Enhydra_lutris.KZ291749.1                             I 3 C 0
s Eptesicus_fuscus.JH977687.1                             4708092 18 +   6522550 tt-caa-----tttCCTTAA--GAT-A
i Eptesicus_fuscus.JH977687.1                           I 3 C 0
s Equus_asinus.JREZ01000062.1                             5854331 18 -   7175178 tt-aaa-----tgtccTGAA--GAG-A
i Equus_asinus.JREZ01000062.1                           I 3 C 0
s Equus_caballus.CM000402.2                              13352831 18 +  41866177 tt-aaa-----tgtccTGAA--GAG-A
i Equus_caballus.CM000402.2                             I 3 C 0
s Equus_przewalskii.ATBW01073585.1                          14321 18 +     92910 tt-aaa-----tgtccTGAA--GAG-A
i Equus_przewalskii.ATBW01073585.1                      I 3 C 0
s Erythrocebus_patas.Contig8                             48778232 23 -  48907691 TT-AAATTAAACTTCTTCAA--GAT-A
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          316360 14 +    330699 -----A-----TGTCCTCAA--GAT-A
i Eschrichtius_robustus.EscRob_flattened_line_685       I 200 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             62815 14 +     89355 -----A-----TGTCCTTAA--GAT-A
i Eubalaena_japonica.EubJap_flattened_line_7756         I 199 C 0
s Eulemur_albifrons.k141_715837                              6109 18 +     13586 TT-GAA-----CTTCCTGAA--GAT-A
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               6041 18 -      6809 TT-GAA-----CTTCCTGAA--GAT-A
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            12515 18 +     36558 TT-GAA-----CTTCCTAAA--GAT-A
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             8832 18 +     60246 TT-GAA-----CTTCCTAAA--GAT-A
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                12314 18 +    109717 TT-GAA-----CTTCCTGAA--GAT-A
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                  299 18 -     19505 TT-GAA-----CTTCCTAAA--GAT-A
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                16974 18 +     27497 TT-GAA-----CTTCCTGAA--AAT-A
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           19430 18 +     26808 TT-GAA-----CTTCCTAAA--GAT-A
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                34168 18 +     46535 TT-GAA-----CTTCCTGAA--GAT-A
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              16894 18 -     29447 TT-GAA-----CTTCCTGAA--GAT-A
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129894093 18 - 159252932 TT-AAA-----TGCTCTTAA--GAT-A
i Felis_catus.CM001386.2                                I 3 C 0
s Felis_catus_fca126.CM031420.1                         129281177 18 - 158578461 TT-AAA-----TGCTCTTAA--GAT-A
i Felis_catus_fca126.CM031420.1                         I 3 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 22317 18 +     52776 TT-AAA-----TGCTCTTAA--GAT-A
i Felis_nigripes.FelNig_flattened_line_8080             I 3 C 0
s Fukomys_damarensis.KN123630.1                          13892505 18 -  19261668 tt-aaa-----cttccTTAG--CAT-A
i Fukomys_damarensis.KN123630.1                         I 3 C 0
s Galago_moholi.ctg555                                     211972 18 -    847004 TT-GAA-----CTTCCTGAA--GAT-A
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           14343 18 -     43889 TT-GAA-----CTTCCTGAA--GAT-A
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          11412 18 +     27357 TT-GAA-----CTTCCTGAA--GAT-A
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               157441 18 +    324696 TT-AAA-----CTTCCTTAA--GAC-A
i Galeopterus_variegatus.GalVar_scaffold_354            I 3 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    182671 18 -    189561 tt-aaa-----tgtccTTAA--GAT-G
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 3 C 0
s Glis_glis.GliGli_scaffold_79770                           14911 18 -     18683 TT-AAA-----CTTCCTTAA--GAT-A
i Glis_glis.GliGli_scaffold_79770                       I 3 C 0
s Gorilla_beringei.k141_111300                               6813 23 -     14630 TT-AAATTAAACTTCTCTAA--GAT-A
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119653913 23 - 195582420 TT-AAATTAAACTTCTCTAA--GAT-A
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   78325 15 +    118900 TT-GAA--------CATTAA--GAT-A
i Graphiurus_murinus.GraMur_scaffold_4493               I 3 C 0
s Hapalemur_alaotrensis.k141_1280836                         2899 18 +     10286 TT-GAA-----CTTCCTGAA--GAT-A
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             1379 18 -     11661 TT-GAA-----CTTCCTGAA--GAT-A
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             6705 18 +     56096 TT-GAA-----CTTCCTGAA--GAT-A
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        29954 18 -     42470 TT-GAA-----CTTCCTGAA--GAT-A
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        46582 18 -     54384 TT-GAA-----CTTCCTGAA--GAT-A
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              18372 18 +     53719 TT-AAG-----TGCTCTTAT--GAT-A
i Helogale_parvula.HelPar_flattened_line_22962          I 3 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                28904 18 -     91191 TT-AAA-----TGTCCTTAA--GAT-G
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 3 C 0
s Heterocephalus_glaber.JH602058.1                        2552224 18 +  31725842 tt-aaa-----cttccTTAA--CAT-T
i Heterocephalus_glaber.JH602058.1                      I 3 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              148247 18 +    277961 TT-AAA-----TGTCCTTAA--GAT-G
i Hippopotamus_amphibius.HipAmp_scaffold_1308           I 3 C 0
s Hipposideros_armiger.JXIK01001085.1                      279535 18 -    477199 TT-AAA-----AGTCCTAAA--GAT-A
i Hipposideros_armiger.JXIK01001085.1                   I 3 C 0
s Hipposideros_galeritus.HipGal_scaffold_345408               532 18 -       919 TT-AAA-----AGTCCTAAA--GAT-A
i Hipposideros_galeritus.HipGal_scaffold_345408         I 3 C 0
s Hoolock_leuconedys.ctg649                                   105295 23 +    115816 TT-AAATTAAACTTCTTCAA--GAT-A
i Hoolock_leuconedys.ctg649                                I 28 I 1157
s Hyaena_hyaena.HyaHya_flattened_line_20729                 18443 18 -     67322 TT-AAA-----TGCTCTTAA--GAT-A
i Hyaena_hyaena.HyaHya_flattened_line_20729             I 3 C 0
s Hylobates_abbotti.k141_164775                              1286 23 -      2073 TT-AAATTAAACTTCTTCAA--GAT-A
i Hylobates_abbotti.k141_164775                         C 0 C 0
s Hylobates_agilis.k141_1362131                               295 23 +      1075 TT-AAATTAAACTTCTTCAA--GAT-A
i Hylobates_agilis.k141_1362131                         C 0 C 0
s Hylobates_klossii.k141_183401                               839 23 -      1272 TT-AAATTAAACTTCTTCAA--GAT-A
i Hylobates_klossii.k141_183401                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14626191 23 -  25970782 TT-AAATTAAACTTCTTCAA--GAT-A
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_950183                              887 23 +      2027 TT-AAATTAAACTTCTTCAA--GAT-A
i Hylobates_muelleri.k141_950183                        C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             35351 23 -     60944 TT-AAATTAAACTTCTTCAA--GAT-A
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     7299 15 +     22540 ----AA-----CTTCCTTAA--CAT-G
i Hystrix_cristata.HysCri_scaffold_50788                I 1 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7126982 18 +  13083262 tt-aaa-----ctttaagat--aac-g
i Ictidomys_tridecemlineatus.JH393315.1                 I 3 I 159
s Indri_indri.k141_5141390                                   1432 18 -      3181 TT-GAA-----CTTCCTGAA--GAT-A
i Indri_indri.k141_5141390                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              10350 14 +     17520 -----A-----TGTCCTTAA--GAT-A
i Inia_geoffrensis.IniGeo_flattened_line_66725          I 196 C 0
s Jaculus_jaculus.JH727545.1                                 2311 18 -      4668 TC-GTA-----CTTTTCTAA--GAT-G
i Jaculus_jaculus.JH727545.1                            I 1 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               24953 14 +     37189 -----A-----TGTCCTTAA--GAT-A
i Kogia_breviceps.KogBre_flattened_line_35920           I 197 C 0
s Lagothrix_lagothricha.k141_12968                          51404 23 -    147782 TT-AAATTATACTTCTTTAA--GAT-A
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    4762 18 +     26176 AT-AAA-----TTTCCATAA--GAT-A
i Lasiurus_borealis.LasBor_scaffold_59542               I 3 C 0
s Lemur_catta.scaffold_1                                258408257 18 - 285822530 TT-GAA-----CTTCCTGAA--GAT-A
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        25008 18 +     39228 TC-GAA-----CTTTCTGAA--GAT-A
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            54394 18 +     63517 TC-AAA-----CTTTCTGAA--GAT-A
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        79656 18 +    116806 TC-GAA-----CTTTCTGAA--GAT-A
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     32647 18 -     33031 TC-GAA-----CTTTCTGAA--GAT-A
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3087124 18 -   3498232 CT-AAA-----TACTCTTAA--GAT-A
i Leptonychotes_weddellii.KB714749.1                    I 3 C 0
s Lepus_americanus.LepAme_scaffold_62849                    14455 18 +     22452 TT-AAA-----TATCCTTAT--GAT-A
i Lepus_americanus.LepAme_scaffold_62849                I 3 C 0
s Lipotes_vexillifer.KE558548.1                            137306 14 +   3060487 -----A-----TGTCCTTAA--GAT-A
i Lipotes_vexillifer.KE558548.1                         I 196 C 0
s Lophocebus_aterrimus.ctg55                             19249850 23 +  19376315 TT-AAATTAAACTTCTTCAA--GAT-A
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           11694 18 +     84689 TT-GAA-----CTTCCTGAA--GAT-A
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3779443 18 +   6799190 TT-GAA-----CTTCCTGAA--GAT-A
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20595957 18 -  62548349 TT-TAA-----TGATCCTAA--cat-a
i Loxodonta_africana.GL010040.1                         I 3 I 292
s Lycaon_pictus.CM007556.1                               11089521 18 +  39895028 tt-aaa-----tgttcttAA--GAT-A
i Lycaon_pictus.CM007556.1                              I 3 C 0
s Macaca_arctoides.k141_2201161                             21607 23 +     74745 TT-AAATTAAACTTCTTCAA--GAT-A
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12708067 23 +  12821369 TT-AAATTAAACTTCTTCAA--GAT-A
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                 645 23 -     26467 TT-AAATTAAACTTCTTCAA--GAT-A
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           48512 23 +     63263 TT-AAATTAAACTTCTTCAA--GAT-A
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                  622 23 -     26361 TT-AAATTAAACTTCTTCAA--GAT-A
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 3799 23 -      7381 TT-AAATTAAACTTCTTCAA--GAT-A
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  47037 23 -     79256 TT-AAATTAAATTTCTTCAA--GAT-A
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196037139 23 + 196197964 tt-aaattaaacttCTTCAA--GAT-A
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11447305 23 +  11645122 tt-aaattaaacttCTTCAA--GAT-A
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   5991 23 -     46448 TT-AAATTAAACTTCTTCAA--GAT-A
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                3657 23 -     13212 TT-AAATTAAACTTCTTCAA--GAT-A
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 17334 23 -     55006 TT-AAACTAAACTTCTTCAA--GAT-A
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43842440 23 +  43892939 TT-AAATTAAACTTCTTCAA--GAT-A
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               18621 23 -     24607 TT-AAATTAAACTTCTTCAA--GAT-A
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               5988 23 -     27140 TT-AAATTAAACTTCTTCAA--GAT-A
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                702118 18 +    802869 TT-AAA-----TGTCCCTAA--GAT-A
i Macroglossus_sobrinus.MacSob_scaffold_879             I 3 C 0
s Mandrillus_leucophaeus.scaffold125                     43439022 23 -  43563597 TT-AAATTAAACTTCTTCAA--GAT-A
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4451836 23 -   4543643 TT-AAATTAAACTTCTTCAA--GAT-A
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            147198 18 +    252755 TT-AAA-----TGTCCGTAA--GAT-A
i Manis_javanica.JSZB01003966.1                         I 3 C 0
s Manis_pentadactyla.KN017078.1                             37341 18 +     58827 tt-aaa-----tgtccTTAA--GAT-A
i Manis_pentadactyla.KN017078.1                         I 3 C 0
s Marmota_marmota.CZRN01000005.1                         36874889 18 +  64221397 tt-aaa-----ctttaagat--aat-g
i Marmota_marmota.CZRN01000005.1                        I 3 I 160
s Mellivora_capensis.MelCap_flattened_line_15433             2160 18 -     87323 TT-AAA-----TGCTTTTAA--AAT-A
i Mellivora_capensis.MelCap_flattened_line_15433        I 3 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               14511 20 +     15977 TT-AAA-----ATTCTTTAAGAGAT-C
i Meriones_unguiculatus.MerUng_scaffold_52233           I 3 C 0
s Mesocricetus_auratus.KB708139.1                         1048196 15 -  26018355 TT-AAC-----ATTCTTTG-----C-A
i Mesocricetus_auratus.KB708139.1                       I 3 C 0
s Mesoplodon_bidens.MesBid_scaffold_475714                    458 14 +       551 -----A-----TGTCCTTAA--GAC-A
i Mesoplodon_bidens.MesBid_scaffold_475714              I 201 C 0
s Microcebus_murinus.CM007691.1                          16511289 18 +  47401472 tt-gaa-----ctTTATGAA--GAT-A
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  39443 19 -     48017 CTTCAA-----AAATTCTTA--TAT-A
i Microgale_talazaci.MicTal_scaffold_34660              I 3 I 23
s Micronycteris_hirsuta.MicHir_scaffold_37978               24012 19 -     32043 TT-AAA-----TGTCCTTAA--GTGAA
i Micronycteris_hirsuta.MicHir_scaffold_37978           I 3 C 0
s Microtus_ochrogaster.CM001673.1                        22820942 18 -  98408828 TT-AAC-----ATTCCTTAA--GCT-A
i Microtus_ochrogaster.CM001673.1                       I 3 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8212124 18 +  10048721 TT-AAA-----TGTCCTTAA--GAT-A
i Miniopterus_natalensis.LDJU01000022.1                 I 3 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            36613 18 +     45743 TT-AAA-----TGTCCTTAA--GAT-A
i Miniopterus_schreibersii.MinSch_scaffold_24116        I 3 C 0
s Miopithecus_ogouensis.k141_2935907                         3583 23 +     29742 TT-AAATTAAACTTCTTCAA--GAT-A
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        12651 18 -    104932 CT-AAA-----TACTCTTAA--GAT-A
i Mirounga_angustirostris.MirAng_flattened_line_8852    I 3 C 0
s Mirza_zaza.k141_226143                                     6678 18 +      8497 TT-GAA-----CTTTCTGCA--GAT-A
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 147733 14 +    154973 -----A-----TGTCCTTAA--GAT-A
i Monodon_monoceros.MonMon_M_scaffold_5598              I 195 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                162552 18 +    265003 TT-AAA-----CGTCCTTAA--GAC-A
i Mormoops_blainvillei.MorMeg_scaffold_2952             I 3 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  2922 18 -     19904 TT-AAA-----TGTCCTTAC--GAT-G
i Moschus_moschiferus.MosMos_scaffold_78805             I 3 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  146071 18 -    168139 TT-AAG-----TGCTCTTAT--GAT-A
i Mungos_mungo.MunMun_flattened_line_8729               I 3 C 0
s Murina_feae.MurFea_scaffold_2254                          23567 18 -    100666 TT-CAA-----TTTCCTTAA--GAT-A
i Murina_feae.MurFea_scaffold_2254                      I 3 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             13421 18 +     98495 TT-AAG-----TTTCATTAA--GAC-A
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 3 C 0
s Mustela_putorius.JH417978.1                             4425525 18 -  28371801 tg-aaa-----tgctttcaa--aat-a
i Mustela_putorius.JH417978.1                           I 3 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     91525 18 -    117718 TT-AAA-----CTTCCTTAA--CAC-A
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 3 C 0
s Myotis_brandtii.KE161952.1                               970432 18 +   8389877 tt-caa-----TTTCCTTAA--GAT-A
i Myotis_brandtii.KE161952.1                            I 3 C 0
s Myotis_davidii.KB114863.1                               5021857 18 +   6462685 tt-caa-----tttccttAA--GAT-A
i Myotis_davidii.KB114863.1                             I 3 C 0
s Myotis_lucifugus.GL429887.1                             3467935 18 -   3747815 tt-caa-----TTTCCTTAA--GAT-A
i Myotis_lucifugus.GL429887.1                           I 3 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        13178 18 +     66751 TT-CAA-----TTTCCTTAA--GAT-A
i Myotis_myotis.MyoMyo_scaffold_6123                    I 3 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             6180 18 -      8794 TC-AAT-----TGAGCCTAA--GAT-A
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        I 3 C 0
s Nasalis_larvatus.k141_153429                              10060 23 +     48152 TT-AAATTAAACTTCTTCAA--GAT-A
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4486041 18 -  14209539 CT-AAA-----TACTCTTAA--GAT-A
i Neomonachus_schauinslandi.NINY01007774.1              I 3 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3952345 14 -   4490290 -----A-----TGTCCTTAA--GAT-A
i Neophocaena_asiaeorientalis.KZ688543.1                I 195 C 0
s Nomascus_annamensis.k141_224620                             657 23 -      2316 TT-AAATTTAACTTGTTCAA--GAT-A
i Nomascus_annamensis.k141_224620                       C 0 C 0
s Nomascus_concolor.k141_226614                              2754 23 -      5092 TT-AAATTAAACTTCTTCAA--GAT-A
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_1004198                           1316 23 +      1448 TT-AAATTAAACTTCTTCAA--GAT-A
i Nomascus_gabriellae.k141_1004198                      I 110 I 44
s Nomascus_siki_b.tarseq_80                             26506 23 -  18771707 TT-AAATTAAACTTCTTCAA--GAT-A
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  4176 23 +      4512 TT-AAATTAAACTTCTTCAA--GAT-A
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                32305 18 +   3668941 tt-aaa-----tgttcttAA--GAT-A
i Nyctereutes_procyonoides.CAJHUB010000786.1            I 3 C 0
s Nycticebus_bengalensis.LG16                            65568148 18 -  95554990 TT-GAA-----CTTCCTGAA--GAT-A
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            4874 18 +      6470 TT-GAA-----CTTCCTGAA--GAT-A
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65670481 18 +  89412551 TT-GAA-----CTTCCTGAA--GAT-A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Octodon_degus.JH651621.1                                3687025 18 +  10294119 tt-aaa-----cttcCTTAA--CAC-A
i Octodon_degus.JH651621.1                              I 3 C 0
s Odobenus_rosmarus.KB229369.1                             680703 18 -   3126709 TT-AAA-----TGCTGTTAA--GAT-A
i Odobenus_rosmarus.KB229369.1                          I 3 C 0
s Odocoileus_virginianus.KZ101650.1                       1081094 18 +   1425656 tt-aaa-----tgtcattaa--aat-g
i Odocoileus_virginianus.KZ101650.1                     I 3 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         38397 18 +     78940 tt-aaa-----tgtcCTTAA--GAT-G
i Okapia_johnstoni.LVCL01S0017931.1                     I 3 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  126207 18 +    145789 TT-AAC-----ATTCCTTAA--GAT-A
i Ondatra_zibethicus.OndZib_scaffold_6821               I 3 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  38392 18 +     62360 TT-AAT-----GTTCTTTAA--GTT-A
i Onychomys_torridus.OnyTor_scaffold_12578              I 4 C 0
s Orcinus_orca.KB316965.1                                 7226030 14 -   7562323 -----A-----TGTCCTTAA--GAT-A
i Orcinus_orca.KB316965.1                               I 195 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              61073 18 -     66828 TT-TAA-----TAATTCTAA--CAT-A
i Orycteropus_afer.OryAfe_flattened_line_13509          I 2 I 58
s Oryctolagus_cuniculus.CM000803.1                      141877493 18 + 163896628 tt-aaa-----tatccCTAT--GAT-A
i Oryctolagus_cuniculus.CM000803.1                      I 3 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      309598 18 -    505867 tt-aaa-----tgttcttAA--GAT-A
i Otocyon_megalotis.JAEUCK010005121.1                   I 3 C 0
s Otolemur_crassicaudatus.k141_505435                        1787 18 -     53940 TT-GAA-----CTTCCTGAC--GAT-A
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18009768 18 -  38779656 TT-GAA-----CTTCCTGAA--GAT-A
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134078696 18 - 275406953 tt-aaa-----tgtccTTAA--GAT-A
i Ovis_aries.CM001582.2                                 I 3 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      79910 18 +    140051 TT-AAA-----TGTCCTTAA--GAT-A
i Ovis_canadensis.OviCan_scaffold_6251                  I 3 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  35460 18 +    295523 TT-AAA-----TGCTCTTAA--GAT-A
i Panthera_onca.PanOnc_flattened_line_1615              I 3 C 0
s Panthera_pardus.KV860323.1                              3639210 18 +  18214204 TT-AAA-----TGCTCTTAA--GAT-A
i Panthera_pardus.KV860323.1                            I 3 C 0
s Panthera_tigris.KE721879.1                              5028886 18 -   6340057 TT-AAA-----TGCTCTTAA--GAT-A
i Panthera_tigris.KE721879.1                            I 3 C 0
s Pantholops_hodgsonii.KE114631.1                         1067545 18 -   1292953 tt-aaa-----tgtccTTAA--GAT-G
i Pantholops_hodgsonii.KE114631.1                       I 3 C 0
s Papio_anubis.CM001492.2                               188157816 23 - 188283584 tt-aaattaaacttcTTCAA--GAT-A
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                               908 23 +     25005 TT-AAATTAAACTTCTTCAA--GAT-A
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47515193 23 +  47705337 TT-AAATTAAACTTCTTCAA--GAT-A
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 69183 23 -    104429 TT-AAATTAAACTTCTTCAA--GAT-A
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    7712 23 +     14967 TT-AAATTAAACTTCTTCAA--GAT-A
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 3577 23 -      7628 TT-AAATTAAACTTCTTCAA--GAT-A
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    116948 18 -    135482 TT-TAA-----TGCTCTTAA--GAT-A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 I 3 C 0
s Perodicticus_ibeanus.k141_117958                           6472 18 -     23713 TT-GAA-----CTTCCTGAA--GAT-A
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            25785 18 -     27972 TT-GAA-----CTTCCTGAA--GAT-A
i Perodicticus_potto.k141_713187                        C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4951780 13 -   8017169 -----------cttctttaa--gaT-A
i Peromyscus_maniculatus.KI615518.1                     I 473 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    14749 18 -     36578 TC-AAA-----CTTCCTTAA--GTT-A
i Petromus_typicus.PetTyp_scaffold_33007                I 3 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071               488 14 +      8220 -----A-----TGTCCTTAA--GAT-A
i Phocoena_phocoena.PhoPho_flattened_line_53071         I 196 C 0
s Piliocolobus_badius.k141_1987485                           3593 23 -      5908 TT-AAATTAAACTTCTTCAA--GAT-A
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       4211 23 -     17985 TT-AAATTAAACTTCTTCAA--GAT-A
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            3578 23 +      7694 TT-AAATTAAACTTCTTCAA--GAT-A
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26742062 23 +  26888534 tt-aaattaaacttcttcaa--gat-a
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pithecia_albicans.k141_991845                             45010 23 -     61926 TT-AAATTATACTTCTTTAA--GAT-A
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        26393 23 +     78826 TT-AAATTATACTTCTTTAA--GAT-A
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                             10441 23 -     15800 TT-AAATTATACTTCTTTAA--GAT-A
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        13640 23 -     16101 TT-AAATTATACTTCTTTAA--GAT-A
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          6869 23 +      9673 TT-AAATTATACTTCTTTAA--GAT-A
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13475869 23 -  19735023 TT-AAATTATACTTCTTTAA--GAT-A
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           14772 23 -     31692 TT-AAATTATACTTCTTTAA--GAT-A
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           6950 14 +     21690 -----A-----TGTCCTTAA--GAT-A
i Platanista_gangetica.PlaMin_flattened_line_72990      I 194 C 0
s Plecturocebus_bernhardi.k141_959214                       24103 23 +     44506 TT-AAATTATACTTCTTTAA--GAT-A
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        24316 23 +     67491 TT-AAATTATACTTCTTTAA--GAT-A
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      14555 23 -     98129 TT-AAATTATACTTCTTTAA--GAT-A
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     24155 23 +    147771 TT-AAATTATACTTCTTTAA--GAT-A
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                          791 23 -     43940 TT-AAATTATACTTCTTTAA--GAT-A
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          4874 23 -     55515 TT-AAATTATACTTCTTTAA--GAT-A
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         24228 23 +    152463 TT-AAATTATACTTCTTTAA--GAT-A
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       1945 23 -    119457 TT-AAATTATACTTCTTTAA--GAT-A
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         13951 23 +    134592 TT-AAATTATACTTCTTTAA--GAT-A
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          24538 23 -     75465 TT-AAATTATACTTCTTTAA--GAT-A
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              188698 23 -    373494 tt-aaattaaacttcTTCAA--GAT-A
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19809345 23 +  19899266 TT-AAATTAAACTTCTTCAA--GAT-A
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               7340 23 -     15069 TT-AAATTAAACTTCTTCAA--GAT-A
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              7455 23 +     14865 TT-AAATTAAACTTCTTCAA--GAT-A
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6849628 18 +  12164890 TT-GAA-----CTTCCTGAA--GAT-A
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     19802 18 -     30946 nn-nnn-----nnnnnnnnn--nnn-n
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         4707 18 +     11805 TT-GAA-----CTTCCTGAA--GAT-A
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           44055 18 +     52369 TT-GAA-----CTTCCTGAA--GAT-A
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         36442 18 -     44753 TT-GAA-----CTTCCTGAA--GAT-A
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            18365 18 +     27322 TT-GAA-----CTTCCTGAA--GAT-A
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       17999 18 -     53241 TT-GAA-----CTTTCTGAA--GAT-A
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         40263 18 -     48185 TT-GAA-----CTTCCTGAA--GAT-A
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           36599 20 +     77221 tt-aaa-----attctttaagaGAT-C
i Psammomys_obesus.NESX01026517.1                       I 3 C 0
s Pteronotus_parnellii.KE867983.1                            5201 18 -     27784 TT-AAC-----TGTCCTTAA--GAC-T
i Pteronotus_parnellii.KE867983.1                       I 3 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        247837 18 -    344369 TT-AAA-----TGCTTTCAA--AAT-A
i Pteronura_brasiliensis.PteBra_flattened_line_1343     I 3 C 0
s Pteropus_alecto.KB031157.1                             13247122 18 -  17261082 tt-aaa-----tgtcctTAA--GAT-A
i Pteropus_alecto.KB031157.1                            I 3 C 0
s Pteropus_vampyrus.KN525959.1                             605072 18 -   3946241 tt-aaa-----tgtcctTAA--GAT-A
i Pteropus_vampyrus.KN525959.1                          I 3 C 0
s Puma_concolor.QAVW01000427.1                          131535481 18 - 161321710 TT-AAA-----TGCTCTTAA--GAT-A
i Puma_concolor.QAVW01000427.1                          I 3 C 0
s Pygathrix_cinerea.k141_374971                             31444 23 +     56732 TT-AAATTAAACTTCTTCAA--GAT-A
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6807938 23 +   6970761 TT-AAATTAAACTTCTTCAA--GAT-A
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             7331 23 +     18040 TT-AAATTAAACTTCTTCAA--GAT-A
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                17206 18 +     68503 TT-AAA-----TGTCATTAA--AAT-G
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 3 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1789001 18 +   2252614 TT-AAA-----TGTTCTGAA--GAT-A
i Rhinolophus_sinicus.LVEH01000179.1                    I 3 C 0
s Rhinopithecus_bieti.k119_554384                            1727 23 -     17045 TT-AAATTAAACTTCTTCAA--GAT-A
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206379215 23 - 206558726 TT-AAATGAAACTTCTTCAA--GAT-A
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44858117 23 -  45163003 TT-AAATTAAACTTCTTCAA--GAT-A
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                20460 17 +    109198 TT-AAA------GTCCTTAA--GAA-A
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            I 3 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       9372 18 +     12214 TT-AAA-----TGTCCTTAA--GAT-G
i Saiga_tatarica.SaiTat_scaffold_82192                  I 3 C 0
s Saimiri_boliviensis.NW_024100938.1                     15673957 23 -  43202129 tt-aaattatacttatttaA--GAT-A
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        5870 23 +     34089 TT-AAATTATACTTATTTAA--GAT-A
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              5812 23 -     60842 TT-AAATTATACTTATTTAA--GAT-A
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              5905 23 +     67014 TT-AAATTATACTTATTTAA--GAT-A
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              5883 23 +     60816 TT-AAATTATACTTATTTAA--GAT-A
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 5820 23 -     76454 TT-AAATTATACTTATTTAA--GAT-A
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17342552 23 -  30362882 TT-AAATTATAATTCTTTAA--GAT-A
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         21913 23 -     62485 TT-AAATTATAATTCTTTAA--GAT-A
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   37834 18 -    114521 TT-AAA-----TATCCTTAA--AAT-A
i Scalopus_aquaticus.ScaAqu_scaffold_9300               I 3 C 0
s Semnopithecus_entellus.k141_1572367                        4947 23 +     15331 TT-AAATTAAACTTCTTCAA--GAT-A
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      10322 23 +     20762 TT-AAATTAAACTTCTTCAA--GAT-A
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         120327 23 +    130994 TT-AAATTAAACTTCTTCAA--GAT-A
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           39106 23 +     46263 TT-AAATTAAACTTCTTCAA--GAT-A
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     32251 23 +     42640 TT-AAATTAAACTTCTTCAA--GAT-A
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        15273 23 +     30600 TT-AAATTAAACTTCTTCAA--GAT-A
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  101554 18 -    120886 TT-AAC-----ATTCCTTAA--GAT-A
i Sigmodon_hispidus.SigHis_scaffold_11332               I 3 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            20020 18 +    739146 TT-AAA-----TGTTCTTAA--AAT-G
i Solenodon_paradoxus.SolPar_flattened_line_1012        I 3 C 0
s Sorex_araneus.JH798170.1                               17767591 18 -  27805282 tt-aaa-----cgTCTTTCA--GAT-A
i Sorex_araneus.JH798170.1                              I 3 C 0
s Spermophilus_dauricus.KZ294190.1                        2240898 18 +   2842873 tt-aaa-----ctttaagat--aat-g
i Spermophilus_dauricus.KZ294190.1                      I 3 I 160
s Spilogale_gracilis.SpiGra_flattened_line_905             236214 18 -    276980 CT-AAA-----TGCTCTTAA--AAT-A
i Spilogale_gracilis.SpiGra_flattened_line_905          I 3 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            28730 18 +     62062 TT-AAG-----GGCTCTTAT--GAT-A
i Suricata_suricatta.SurSur_flattened_line_20339        I 3 C 0
s Sus_scrofa.CM000824.4                                 189273232 18 + 218635234 tg-aaa-----tgtctttAA--GAC-A
i Sus_scrofa.CM000824.4                                 I 3 C 0
s Symphalangus_syndactylus.tarseq_24                        16450 23 -  13920577 TT-AAATTAAACTTCTTCAA--GAT-A
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                1430 18 +     20549 TT-AGA-----TGTCCTTGA--AAT-A
i Tadarida_brasiliensis.TadBra_scaffold_61492           I 3 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               15846 18 +     45698 TC-AAT-----TGAGCCTAA--GAT-A
i Tamandua_tetradactyla.TamTet_scaffold_26877           I 3 C 0
s Tapirus_indicus.TapInd_scaffold_176                      808281 18 +   1148477 TT-AAA-----TGTCCTTAA--GAT-A
i Tapirus_indicus.TapInd_scaffold_176                   I 3 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  58994 18 +     99546 TT-AAA-----TGTCCTTAA--GAT-A
i Tapirus_terrestris.TapTer_scaffold_14939              I 3 C 0
s Theropithecus_gelada.CM009951.1                       194009344 23 - 194193292 tt-aaattaaacttcTTCAA--GAT-A
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             40107 18 -     47444 TC-AAG-----CTTCCTTAA--CAg-t
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         I 4 C 0
s Tolypeutes_matacus.TolMat_scaffold_1305119                   36 18 -       594 TC-AAA-----TGACTCAAA--TAT-A
i Tolypeutes_matacus.TolMat_scaffold_1305119            I 3 I 20
s Tonatia_saurophila.TonSau_scaffold_3334                  137176 19 -    259118 TT-AAA-----TGTCCTTAA--GTGAA
i Tonatia_saurophila.TonSau_scaffold_3334               I 3 C 0
s Trachypithecus_auratus.k141_738098                        28594 23 +     38948 TT-AAATTAAACTTCTTCAA--GAT-A
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   22154 23 -     32910 TT-AAATTAAACTTCTTCAA--GAT-A
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      4055 23 -     12939 TT-AAATTAAACTTCTTCAA--GAT-A
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       3483 23 -     14244 TT-AAATTAAACTTCTTCAA--GAT-A
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           44881 23 -     54611 TT-AAATTAAACTTCTTCAA--GAT-A
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        2677 23 -     11566 TT-AAATTAAACTTCTTCAA--GAT-A
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     4861 23 -     15592 TT-AAATTAAACTTCTTCAA--GAT-A
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          3513 23 +     14371 TT-AAATTAAACTTCTTCAA--GAT-A
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   1799 23 +     12481 TT-AAATTAAACTTCTTCAA--GAT-A
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        1780 23 -     24393 TT-AAATTAAACTTCTTCAA--GAT-A
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       6924 23 -     28054 TT-AAATTAAACTTCTTCAA--GAT-A
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44661708 23 -  44834318 TT-AAATTAAACTTCTTCAA--GAT-A
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       4025 23 +     13828 TT-AAATTAAACTTCTTCAA--GAT-A
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   6566 18 +     90398 TT-AAA-----TGTCCCTAA--CAT-G
i Tragulus_javanicus.TraJav_scaffold_14717              I 3 C 0
s Trichechus_manatus.JH594618.1                          16086971 18 +  31416278 TT-TAA-----TGATCCTAA--Cat-a
i Trichechus_manatus.JH594618.1                         I 3 I 278
s Tupaia_chinensis.KB320831.1                             2794602 18 -   3938065 TT-AAA-----CTGCTTTAA--GAT-A
i Tupaia_chinensis.KB320831.1                           I 3 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    6706 18 +     13056 TT-AAA-----CTTCTTTAA--GAT-A
i Tupaia_tana.TupTan_flattened_line_68454               I 3 C 0
s Tursiops_truncatus.MRVK01000923.1                      69314747 14 -  96451834 -----A-----TGTCCTTAA--AAT-A
i Tursiops_truncatus.MRVK01000923.1                     I 196 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   8403 18 +     10241 TT-AAA-----TATTTTTAA--GAT-A
i Uropsilus_gracilis.UroGra_scaffold_69449              I 3 C 0
s Ursus_maritimus.KK498671.1                              6515959 18 +  28682327 tt-aaa-----tgcTCTTAA--GAT-A
i Ursus_maritimus.KK498671.1                            I 3 C 0
s Varecia_rubra.k141_432109                                  6263 18 -     20643 TT-GAA-----CTTCCTGAA--TAT-A
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             25798 18 -     33872 TT-GAA-----CTTCCTGAA--TAT-A
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1525772 18 -   2331223 tt-aaa-----tgtccTTAA--GAT-A
i Vicugna_pacos.KN269600.1                              I 3 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                139700 18 -    281493 TT-AAA-----TGTTCTTAA--GAT-A
i Vulpes_lagopus.VulLag_flattened_line_2045             I 3 C 0
s Xerus_inauris.XerIna_scaffold_7898                       128016 18 -    134049 TT-AAA-----CTTTAATAT--CAT-A
i Xerus_inauris.XerIna_scaffold_7898                    I 3 I 5
s Zalophus_californianus.ZalCal_flattened_line_4097        215438 18 -    227762 TT-AAA-----TGCTCTTAG--GAT-A
i Zalophus_californianus.ZalCal_flattened_line_4097     I 3 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     17561 18 -     20485 TC-CTA-----CTTCTTTAA--GAT-G
i Zapus_hudsonius.ZapHud_scaffold_64392                 I 605 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           8245 14 -      8775 -----A-----TGTCCTTAA--GAT-A
i Ziphius_cavirostris.ZipCav_flattened_line_127025      I 202 C 0
e Ochotona_princeps.JH802095.1                            4996729 2205 -  23139505 I
e Perognathus_longimembris.PerPac_flattened_line_19359        892 695 +     49596 I
e Dipodomys_ordii.KN672545.1                              3657363 894 +   4240102 I
e Procavia_capensis.ProCapCap_scaffold_149274                2467 1156 -      9567 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Megaderma_lyra.MegLyr_scaffold_3562                       64783 239 -    234502 I
e Heterohyrax_brucei.HetBruBak_scaffold_25354               61360 1157 +     73687 I
e Echinops_telfairi.JH980316.1                           22999931  2 -  44670279 I
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1008 325 -      5782 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19677 266 -    119109 I
e Tarsius_wallacei.k141_48636                               60532 3805 +     65473 I
e Tarsius_lariang.k141_609102                               27216 3812 +     42269 I
e Rattus_norvegicus.chr11                                13915860 1475 +  90463843 I
e Nannospalax_galili.KL201303.1                            119252 614 +    362372 I
e Mus_spretus.CM004110.1                                 74333573 2703 +  97876770 I
e Mus_pahari.LT608305.1                                  67557037 2889 +  89017189 I
e Mus_musculus.chr16                                     75490838 2711 +  98207768 I
e Mus_caroli.LT608236.1                                  70767758 3738 +  92629107 I
e Dolichotis_patagonum.DolPat_scaffold_14102                36772 276 -     73477 I
e Dasyprocta_punctata.DasPun_flattened_line_634             59553 276 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                18462 277 +     26546 I
e Ctenodactylus_gundi.CteGun_scaffold_447                  209506 3013 -    956709 I
e Cephalopachus_bancanus.k141_702587                         8788 3391 +     21754 I
e Cavia_tschudii.CavTsc_scaffold_488                       177453 271 +    436027 I
e Cavia_porcellus.DS562889.1                             15799262 290 -  24440124 I
e Cavia_aperea.AVPZ01000278.1                            15787326 288 -  24422027 I
e Carlito_syrichta.NW_007248099.1                          309764 3411 +    345090 I
e Pan_paniscus.CM003386.1                               127575888 480 - 205426864 I
e Pan_troglodytes.CM009241.2                            120153042 480 - 196562556 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               15122 5 +    209709 ATATT
s Acinonyx_jubatus.LLWD01000356.1                         2035139 5 +   3721120 ATGTG
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    114996 5 -    189883 ATACA
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 I 11
s Ailuropoda_melanoleuca.LNAT01000321.1                  10658706 5 +  23371972 ATGTG
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7095840 5 -  16596857 ATGTG
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   19375 5 -     22067 GTGTG
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   2849 5 -     60446 ATATT
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         3566 5 -     29318 ATATT
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         2502 5 +     38766 ATATT
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          3460 5 -     80423 ATATT
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            11447 5 -     18050 ATGTT
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_1710068                               1163 5 +      1555 ATGTT
i Alouatta_caraya.k141_1710068                          C 0 C 0
s Alouatta_discolor.k141_811576                             12120 5 -     21359 ATGTT
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                1743 5 +      2129 ATGTT
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_2177643                          1120 5 -      1868 ATGTT
i Alouatta_macconnelli.k141_2177643                     C 0 C 0
s Alouatta_nigerrima.k141_3537692                            1169 5 +      1660 ATGTT
i Alouatta_nigerrima.k141_3537692                       C 0 C 0
s Alouatta_palliata.k141_2764429                             1089 5 -      1480 ATGTT
i Alouatta_palliata.k141_2764429                        C 0 C 0
s Alouatta_puruensis.k141_131505                              376 5 +      4855 ATGTT
i Alouatta_puruensis.k141_131505                        C 0 C 0
s Alouatta_seniculus.k141_1531728                            1304 5 -      1692 ATGTT
i Alouatta_seniculus.k141_1531728                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3521563 5 +   4113121 ATGTA
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      391653 5 -    631301 ATGTG
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            32147 5 +     33004 ATGTA
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 63790 5 +     78111 ATGTT
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            6733 5 +     22701 ATGTT
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5750690 5 +   9889416 ATGTT
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             7279 5 -    104377 ATGTT
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               7281 5 +     23246 ATGTT
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_231055                     1168 5 -      2492 ATGTG
i Aplodontia_rufa.AprRuf_scaffold_231055                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        2084 5 +      9265 ATGTG
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                10070 5 -     29036 ATGTG
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9540556 5 +  39197703 ACGTT
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             61829 5 +     85812 ATGTT
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                12842 5 +     89302 ATGTT
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             17343 5 -     58268 ACGTT
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             65337 5 +    119057 ATGTT
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               7306 5 -     25888 ATGTT
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 7817 5 -     16375 ATGTG
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               1433 5 +      6337 ATGTG
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26381533 5 +  51448160 ATGTG
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        6706 5 -     13118 ATATG
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   44669 5 -     72089 ATGCA
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6561290 5 +   6870073 ATGTA
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138141412 5 - 161108492 ATGTA
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     573942 5 -    998990 ATGTA
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136297145 5 - 158972876 ATGTA
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1234226 5 -   1914593 ATGTA
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               115190 5 -    171031 ATGTT
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 14219 5 +    125063 ATGTT
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                16262 5 -    216513 ATGTT
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        8805 5 -    134917 ATGTT
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3220685 5 -   8989139 ATGTG
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           398386 5 -  15254737 ATGTG
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2974122 5 +   6889770 ATGTG
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11520881 5 +  39901454 ATGTG
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   15906 5 +     87036 ATGTG
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11267550 5 -  35597290 ATGTG
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11090083 5 +  39895921 ATGTG
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16457096 5 -  44759192 ATGTG
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21326634 5 + 157394656 ATGTA
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135707862 5 - 157403528 ATGTA
i Capra_hircus.CM004562.1                               C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               60857 5 +     67245 ATGTG
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   32251 5 +     33760 AGATA
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   160292 5 -    276539 ATGTG
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18892030 5 -  29618158 ATGTT
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 9574 5 -     26817 ATGTT
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                13817 5 +     25043 ATGTT
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4365059 5 +   7569818 ATGTG
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         4816 5 -      9338 ATGTG
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6556796 5 +   6739814 ATATT
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      28270 5 +     60454 ATATT
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          3477 5 -     21101 ATATT
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         60787 5 -    107033 ATATT
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        3666 5 -     17608 ATATT
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                           825 5 +     45019 ATATT
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                            909 5 +     15177 ATATT
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          3709 5 +     16677 ATATT
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           25879 5 +     35983 ATATT
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11992407 5 +  12117833 ATATT
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46479165 5 +  46592721 ATATT
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      42719 5 -     45581 ATATT
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       3721 5 +     35577 ATATT
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        3494 5 -     25661 ATATT
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        3473 5 -     17744 ATATT
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        23079 5 +     37128 ATATT
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           60088 5 -     68416 ATGTG
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            9140 5 +     13308 ATGTG
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             6847 5 -     18223 ATGTT
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             23865 5 +     25473 ATGTT
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           42905 5 +     57117 ATGTT
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          47584 5 +     54541 ATGTT
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15962861 5 +  43084221 ATGTG
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         72391 5 +    196370 ATGTT
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          16571 5 +     40510 ATGTT
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15141076 5 -  15256731 ATATT
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      35685 5 -     53260 ATATT
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101146244 5 + 101219884 ATATT
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10888233 5 +  10971483 ATATT
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147666161 5 + 156195979 ATATT
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            18144 5 +     23629 ATATT
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60620717 5 +  78930452 atGTG
i Condylura_cristata.JH655880.1                         C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 279510 5 -    399297 GTGCG
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53031615 5 +  72327488 ATGCA
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_848148              693 5 +      1327 ATATG
i Crocidura_indochinensis.CroInd_scaffold_848148        C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            53195 5 -     70449 ATGTT
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 32217 5 -     67205 ATGTG
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16845953 5 +  31942871 ATGTG
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80038157 5 -  96802777 ATGGG
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18700148 5 -  18957592 ATGTG
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 323711 5 +    993696 ATGTG
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   158060 5 +    228994 ATGTG
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Eidolon_helvum.KE772537.1                                 13420 5 +     24177 GTGAA
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1492895 5 +   1727528 ATGGA
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7829864 4 +  15467074 -TGTG
i Elephantulus_edwardii.JH947210.1                      I 5 C 0
s Ellobius_lutescens.LOEQ01003611.1                        240590 5 -    369425 GTCTA
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01090055.1                           7771 5 -      7838 GTCTA
i Ellobius_talpinus.LOJH01090055.1                      C 0 N 0
s Enhydra_lutris.KZ291749.1                              85873279 5 +  99434291 ATGTG
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4708110 5 +   6522550 ATGTG
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5854349 5 -   7175178 ATGTG
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13352849 5 +  41866177 ATGTG
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          14339 5 +     92910 ATGTG
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erythrocebus_patas.Contig8                             48778255 5 -  48907691 ATATT
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          316374 5 +    330699 ATGTG
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             62829 5 +     89355 ATGTG
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              6127 5 +     13586 ATGTG
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               6059 5 -      6809 ATGTG
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            12533 5 +     36558 ATGTG
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             8850 5 +     60246 ATGTG
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                12332 5 +    109717 ATGTG
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                  317 5 -     19505 ATGTG
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                16992 5 +     27497 ATGTG
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           19448 5 +     26808 ATGTG
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                34186 5 +     46535 ATGTG
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              16912 5 -     29447 ATGTG
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129894111 5 - 159252932 ATGTG
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129281195 5 - 158578461 ATGTG
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 22335 5 +     52776 ATGTG
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13892523 5 -  19261668 ATGTA
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     211990 5 -    847004 AAGTG
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           14361 5 -     43889 AAGTG
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          11430 5 +     27357 AAGTG
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               157459 5 +    324696 ATGTG
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    182689 5 -    189561 ATGTA
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           14929 5 -     18683 AAGTA
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               6836 5 -     14630 ATATT
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119653936 5 - 195582420 ATATT
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   78340 5 +    118900 TTGTG
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         2917 5 +     10286 ATGTG
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             1397 5 -     11661 ATGTG
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             6723 5 +     56096 ATGTG
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        29972 5 -     42470 ATGTG
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        46600 5 -     54384 ATGTG
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              18390 5 +     53719 ATGTT
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                28922 5 -     91191 ATGTA
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2552242 5 +  31725842 ATGTG
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              148265 5 +    277961 ATGTG
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      279553 5 -    477199 ATGTG
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_345408               550 5 -       919 ATGTG
i Hipposideros_galeritus.HipGal_scaffold_345408         C 0 C 0
s Hoolock_leuconedys.ctg79                                      6526 5 -   7690867 ATATT
i Hoolock_leuconedys.ctg79                                 I 23 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 18461 5 -     67322 GTGTG
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hylobates_abbotti.k141_164775                              1309 5 -      2073 ATCTT
i Hylobates_abbotti.k141_164775                         C 0 C 0
s Hylobates_agilis.k141_1362131                               318 5 +      1075 ATATT
i Hylobates_agilis.k141_1362131                         C 0 C 0
s Hylobates_klossii.k141_183401                               862 5 -      1272 ATATT
i Hylobates_klossii.k141_183401                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14626214 5 -  25970782 ATATT
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_950183                              910 5 +      2027 ATCCT
i Hylobates_muelleri.k141_950183                        C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             35374 5 -     60944 ATATT
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     7314 5 +     22540 ATGTA
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7127159 5 +  13083262 ctgtg
i Ictidomys_tridecemlineatus.JH393315.1                 I 159 C 0
s Indri_indri.k141_5141390                                   1450 5 -      3181 ATGTG
i Indri_indri.k141_5141390                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              10364 5 +     17520 ATGGG
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH727545.1                                 2329 5 -      4668 GTGGG
i Jaculus_jaculus.JH727545.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               24967 5 +     37189 ATGTG
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          51427 5 -    147782 ATGTT
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    4780 5 +     26176 ATGTG
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258408275 5 - 285822530 ATGTG
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        25026 5 +     39228 ATGTG
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            54412 5 +     63517 ATGTG
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        79674 5 +    116806 ATGTG
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     32665 5 -     33031 ATGTG
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3087142 5 -   3498232 ATGTG
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    14473 5 +     22452 ATGTG
i Lepus_americanus.LepAme_scaffold_62849                C 0 I 11
s Lipotes_vexillifer.KE558548.1                            137320 5 +   3060487 ACGAG
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19249873 5 +  19376315 ATATT
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           11712 5 +     84689 ATGTG
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3779461 5 +   6799190 ATGTG
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20596267 5 -  62548349 ATGTA
i Loxodonta_africana.GL010040.1                         I 292 C 0
s Lycaon_pictus.CM007556.1                               11089539 5 +  39895028 ATGTG
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             21630 5 +     74745 ACATT
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12708090 5 +  12821369 ACATT
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                 668 5 -     26467 ACATT
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           48535 5 +     63263 ACATT
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                  645 5 -     26361 ACATT
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 3822 5 -      7381 ACATT
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  47060 5 -     79256 ACATT
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196037162 5 + 196197964 ACATT
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11447328 5 +  11645122 ACATT
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   6014 5 -     46448 ACATT
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                3680 5 -     13212 ACATT
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 17357 5 -     55006 ACATT
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43842463 5 +  43892939 ACATT
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               18644 5 -     24607 ACATT
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               6011 5 -     27140 ACATT
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                702136 5 +    802869 GTGAG
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43439045 5 -  43563597 ATATT
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4451859 5 -   4543643 ATATT
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            147216 5 +    252755 ATTTG
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             37359 5 +     58827 ATTTG
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36875067 5 +  64221397 atgtg
i Marmota_marmota.CZRN01000005.1                        I 160 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             2178 5 -     87323 ATGTG
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               14531 5 +     15977 ATACA
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 I 2
s Mesocricetus_auratus.KB708139.1                         1048211 5 -  26018355 ATGCA
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_475714                    472 5 +       551 ATGTG
i Mesoplodon_bidens.MesBid_scaffold_475714              C 0 C 0
s Microcebus_murinus.CM007691.1                          16511307 5 +  47401472 ATGTG
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               24031 5 -     32043 ATGTG
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 I 19
s Microtus_ochrogaster.CM001673.1                        22820960 5 -  98408828 ATGCA
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8212142 5 +  10048721 ACGTG
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            36631 5 +     45743 CCGTG
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         3606 5 +     29742 ATATT
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        12669 5 -    104932 ATGTG
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     6696 5 +      8497 ATGTG
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 147747 5 +    154973 ATGGG
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                162570 5 +    265003 ATGTG
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  2940 5 -     19904 ATGTA
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  146089 5 -    168139 ATGTT
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          23585 5 -    100666 ATGTG
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             13439 5 +     98495 AAGAA
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4425543 5 -  28371801 atGTG
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     91543 5 -    117718 ATGTG
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               970450 5 +   8389877 ATGTG
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5021875 5 +   6462685 ATGTG
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3467953 5 -   3747815 ATGTG
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        13196 5 +     66751 ATGTG
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Nasalis_larvatus.k141_153429                              10083 5 +     48152 ATATT
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4486059 5 -  14209539 ATGTG
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3952359 5 -   4490290 ATGGG
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Nomascus_annamensis.k141_224620                             680 5 -      2316 ATATT
i Nomascus_annamensis.k141_224620                       C 0 C 0
s Nomascus_concolor.k141_226614                              2777 5 -      5092 ATATT
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_1032971                            351 5 -      1918 ATATT
i Nomascus_gabriellae.k141_1032971                      I 23 C 0
s Nomascus_siki_b.tarseq_80                             26529 5 -  18771707 ATATT
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  4199 5 +      4512 ATATT
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                32323 5 +   3668941 ATGTA
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65568166 5 -  95554990 ATGTG
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            4892 5 +      6470 ATGTG
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65670499 5 +  89412551 ATGTG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Octodon_degus.JH651621.1                                3687043 5 +  10294119 ATGTG
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             680721 5 -   3126709 ATGTG
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1081112 5 +   1425656 aTGTA
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         38415 5 +     78940 ATGTA
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  126225 5 +    145789 ATCCA
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  38410 5 +     62360 ATGCA
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7226044 5 -   7562323 ATGGG
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              61149 5 -     66828 ATGTG
i Orycteropus_afer.OryAfe_flattened_line_13509          I 58 C 0
s Oryctolagus_cuniculus.CM000803.1                      141877511 5 + 163896628 ATGTG
i Oryctolagus_cuniculus.CM000803.1                      C 0 I 11
s Otocyon_megalotis.JAEUCK010005121.1                      309616 5 -    505867 ATGTG
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        1805 5 -     53940 AAGTG
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18009786 5 -  38779656 AAGTG
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134078714 5 - 275406953 ATGTA
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      79928 5 +    140051 ATGTA
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  35478 5 +    295523 ATGTG
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3639228 5 +  18214204 ATGTG
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5028904 5 -   6340057 ATGTG
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1067563 5 -   1292953 ATGTA
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188157839 5 - 188283584 ATATT
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                               931 5 +     25005 ATATT
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47515216 5 +  47705337 ATATT
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 69206 5 -    104429 ATATT
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    7735 5 +     14967 ATATT
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 3600 5 -      7628 ATATT
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    116966 5 -    135482 ATGTG
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           6490 5 -     23713 ATGTG
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            25803 5 -     27972 ATGTG
i Perodicticus_potto.k141_713187                        C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4951793 5 -   8017169 ATGCC
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    14767 5 -     36578 ATCAG
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071               502 5 +      8220 ATGGG
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Piliocolobus_badius.k141_1987485                           3616 5 -      5908 ATATT
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       4234 5 -     17985 ATATT
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            3601 5 +      7694 ATATT
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26742085 5 +  26888534 atatt
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pithecia_albicans.k141_991845                             45033 5 -     61926 ATGTT
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        26416 5 +     78826 ATGTT
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                             10464 5 -     15800 ATGTT
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        13663 5 -     16101 ATGTT
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          6892 5 +      9673 ATGTT
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13475892 5 -  19735023 ATGTT
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           14795 5 -     31692 ATGTT
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           6964 5 +     21690 ACGTG
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       24126 5 +     44506 ATGTT
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        24339 5 +     67491 ATGTT
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      14578 5 -     98129 ATGTT
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     24178 5 +    147771 ATGTT
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                          814 5 -     43940 ATGTT
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          4897 5 -     55515 ATGTT
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         24251 5 +    152463 ATGTT
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       1968 5 -    119457 ATGTT
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         13974 5 +    134592 ATGTT
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          24561 5 -     75465 ATGTT
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              188721 5 -    373494 ATATT
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19809368 5 +  19899266 ATATT
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               7363 5 -     15069 ATATT
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              7478 5 +     14865 ATATT
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6849646 5 +  12164890 ATGTG
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     19820 5 -     30946 nnnnn
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         4725 5 +     11805 ACGTA
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           44073 5 +     52369 ATGTG
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         36460 5 -     44753 ATGTG
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            18383 5 +     27322 ATGTG
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       18017 5 -     53241 ATGTA
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         40281 5 -     48185 ATGTG
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           36619 5 +     77221 ATACA
i Psammomys_obesus.NESX01026517.1                       C 0 I 2
s Pteronotus_parnellii.KE867983.1                            5219 5 -     27784 ATGTG
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        247855 5 -    344369 ATGTG
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13247140 5 -  17261082 GTGAG
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             605090 5 -   3946241 GTGAG
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131535499 5 - 161321710 ATGTG
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             31467 5 +     56732 ATATT
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6807961 5 +   6970761 ATATT
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             7354 5 +     18040 ATATT
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                17224 5 +     68503 ATGTA
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1789019 5 +   2252614 ATGTG
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                            1750 5 -     17045 ATATT
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206379238 5 - 206558726 ATATT
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44858140 5 -  45163003 ATATT
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                20477 5 +    109198 GTGAG
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       9390 5 +     12214 ATGCA
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15673980 5 -  43202129 ATGTT
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        5893 5 +     34089 ATGTT
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              5835 5 -     60842 ATGTT
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              5928 5 +     67014 ATGTT
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              5906 5 +     60816 ATGTT
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 5843 5 -     76454 ATGTT
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17342575 5 -  30362882 ATGTT
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         21936 5 -     62485 ATGTT
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   37852 5 -    114521 ATGTG
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 I 12
s Semnopithecus_entellus.k141_1572367                        4970 5 +     15331 ATATT
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      10345 5 +     20762 ATATT
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         120350 5 +    130994 ATATT
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           39129 5 +     46263 ATATT
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     32274 5 +     42640 ATATT
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        15296 5 +     30600 ATATT
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  101572 5 -    120886 ATGCA
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            20038 5 +    739146 ATGTG
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17767609 5 -  27805282 ATATG
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2241076 5 +   2842873 ctgtg
i Spermophilus_dauricus.KZ294190.1                      I 160 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             236232 5 -    276980 ATGGG
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            28748 5 +     62062 ATGTT
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189273250 5 + 218635234 ATGTG
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        16473 5 -  13920577 ATATT
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                1448 5 +     20549 ATGTG
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      808299 5 +   1148477 ATGTG
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  59012 5 +     99546 ATGTG
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194009367 5 - 194193292 ATATT
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             40125 5 -     47444 gtgag
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 I 133
s Tonatia_saurophila.TonSau_scaffold_3334                  137195 5 -    259118 ATGTG
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        28617 5 +     38948 ATATT
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   22177 5 -     32910 ATATT
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      4078 5 -     12939 ATATT
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       3506 5 -     14244 ATATT
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           44904 5 -     54611 ATATT
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        2700 5 -     11566 ATATT
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     4884 5 -     15592 ATATT
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          3536 5 +     14371 ATATT
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   1822 5 +     12481 ATATT
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        1803 5 -     24393 ATATT
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       6947 5 -     28054 ATATT
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44661731 5 -  44834318 ATATT
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       4048 5 +     13828 ATATT
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   6584 5 +     90398 ACATG
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16087267 5 +  31416278 atgta
i Trichechus_manatus.JH594618.1                         I 278 C 0
s Tupaia_chinensis.KB320831.1                             2794620 5 -   3938065 ATATG
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    6724 5 +     13056 ATATG
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69314761 5 -  96451834 ATGGG
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   8421 5 +     10241 ATGTG
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6515977 5 +  28682327 ATGTG
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  6281 5 -     20643 ATGTG
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             25816 5 -     33872 ATGTG
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1525790 5 -   2331223 ATGTG
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                139718 5 -    281493 ATGTG
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        215456 5 -    227762 ATGTG
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     17579 4 -     20485 GT-TG
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           8259 5 -      8775 ATGTG
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           3899 20 -      6963 I
e Ochotona_princeps.JH802095.1                            4996729 2205 -  23139505 I
e Perognathus_longimembris.PerPac_flattened_line_19359        892 695 +     49596 I
e Dipodomys_ordii.KN672545.1                              3657363 894 +   4240102 I
e Tolypeutes_matacus.TolMat_scaffold_1305119                   54 20 -       594 I
e Tamandua_tetradactyla.TamTet_scaffold_26877               15864 0 +     45698 C
e Procavia_capensis.ProCapCap_scaffold_149274                2467 1156 -      9567 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             6198 0 -      8794 C
e Microgale_talazaci.MicTal_scaffold_34660                  39462 23 -     48017 I
e Megaderma_lyra.MegLyr_scaffold_3562                       64783 239 -    234502 I
e Heterohyrax_brucei.HetBruBak_scaffold_25354               61360 1157 +     73687 I
e Echinops_telfairi.JH980316.1                           22999931 2 -  44670279 I
e Diceros_bicornis.DicBicMic_scaffold_9545                   4355 0 +    151128 C
e Dasypus_novemcinctus.JH568778.1                          184768 0 -   6883506 C
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1008 325 -      5782 I
e Choloepus_hoffmanni.KN194586.1                           762964 0 +    964067 C
e Choloepus_didactylus.ChoDid_scaffold_36182                17659 0 -     21363 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19677 266 -    119109 I
e Xerus_inauris.XerIna_scaffold_7898                       128034 5 -    134049 I
e Tarsius_wallacei.k141_48636                               60532 3805 +     65473 I
e Tarsius_lariang.k141_609102                               27216 3812 +     42269 I
e Rattus_norvegicus.chr11                                13915860 1475 +  90463843 I
e Nannospalax_galili.KL201303.1                            119252 614 +    362372 I
e Mus_spretus.CM004110.1                                 74333573 2703 +  97876770 I
e Mus_pahari.LT608305.1                                  67557037 2889 +  89017189 I
e Mus_musculus.chr16                                     75490838 2711 +  98207768 I
e Mus_caroli.LT608236.1                                  70767758 3738 +  92629107 I
e Dolichotis_patagonum.DolPat_scaffold_14102                36772 276 -     73477 I
e Dasyprocta_punctata.DasPun_flattened_line_634             59553 276 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                18462 277 +     26546 I
e Ctenodactylus_gundi.CteGun_scaffold_447                  209506 3013 -    956709 I
e Cephalopachus_bancanus.k141_702587                         8788 3391 +     21754 I
e Cavia_tschudii.CavTsc_scaffold_488                       177453 271 +    436027 I
e Cavia_porcellus.DS562889.1                             15799262 290 -  24440124 I
e Cavia_aperea.AVPZ01000278.1                            15787326 288 -  24422027 I
e Carlito_syrichta.NW_007248099.1                          309764 3411 +    345090 I
e Pan_paniscus.CM003386.1                               127575888 480 - 205426864 I
e Pan_troglodytes.CM009241.2                            120153042 480 - 196562556 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               15127 39 +    209709 C---ATA--TTA-A----TCCT-T-----CTT------------------------T------AAT-TGCTGAAT-G-AGTAA-TA-ATT
s Acinonyx_jubatus.LLWD01000356.1                         2035144 42 +   3721120 C---CAG--TTA-A----ACTT-T-------T--------------CG--TAT--AT------AAT-TACTGAGT-G-AGGA--TA-TTT
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    115012 30 -    189883 -----------------------T-------TT---------------AC---CTGC------AAC-TGCTGAAT-G-GAGA--TG-TTT
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 11 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10658711 42 +  23371972 C---CAA--TTA-A----GCTT-T-------T-----------------CAT-ATCT------AAT-TGCTGAGT-G-AGGA--TA-TTT
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7095845 42 -  16596857 C---CAA--TGA-A----GCTT-T-------TCAT-----------AG-C------T------AAT-TGCTGAAT-G-AGGA--TA-TTT
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   19380 60 -     22067 C---ATC--CTT-A----GATT-T-------TTTTTTTTTTTTTTTTGGCTTTCTGT------AGT-TAGTAAAA-G-GAGT--TA-TTT
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   2854 39 -     60446 C---ATG--TTA-A----TCCT-T-----CTT------------------------T------GAT-TGCTGAAC-G-AGGAA-TA-ATT
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         3571 39 -     29318 C---ATG--TTA-A----TCCT-T-----CTT------------------------T------GAT-TGCTGAAT-G-AGGAA-TA-ATT
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         2507 39 +     38766 C---ATG--TTA-A----TCCT-T-----CTT------------------------T------GAT-TGCTGAAT-G-AGGAA-TA-ATT
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          3465 39 -     80423 C---ATG--TTA-A----TCCT-T-----CTT------------------------T------GAT-TGCTGAAT-G-AGGAA-TA-ATT
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            11452 42 -     18050 C---ATA--TTA-A----TCCT-T--TTTCTC------------------------T------AAT-TGCTGAAT-G-AGGAA-TA-ATT
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_1710068                               1168 42 +      1555 C---ATA--TTA-A----TCCT-T--TTTCTC------------------------T------AAT-TGCTGAAT-G-AGGAA-TA-ATT
i Alouatta_caraya.k141_1710068                          C 0 C 0
s Alouatta_discolor.k141_811576                             12125 42 -     21359 C---ATA--TTA-A----TCCT-T--TTTCTC------------------------T------AAT-TGCTGAAT-G-AGGAA-TA-ATT
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                1748 42 +      2129 C---ATA--TTA-A----TCCT-T--TTTCTC------------------------T------AAT-TGCTGAAT-G-AGGAA-TA-ATT
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_2177643                          1125 42 -      1868 C---ATA--TTA-A----TCCT-T--TTTCTC------------------------T------AAT-TGCTGAAT-G-AGGAA-TA-ACT
i Alouatta_macconnelli.k141_2177643                     C 0 C 0
s Alouatta_nigerrima.k141_3537692                            1174 42 +      1660 C---ATA--TTA-A----TCCT-T--TTTCTC------------------------T------AAT-TGTTGAAT-G-AGGAA-TA-ATT
i Alouatta_nigerrima.k141_3537692                       C 0 C 0
s Alouatta_palliata.k141_2764429                             1094 42 -      1480 C---ATA--TTA-A----TCCT-T--TTTCTC------------------------T------AAT-TGCTGAAT-G-AGGAA-TA-ATT
i Alouatta_palliata.k141_2764429                        C 0 C 0
s Alouatta_puruensis.k141_131505                              381 42 +      4855 C---ATA--TTA-A----TCCT-T--TTTCTC------------------------T------AAT-TGCTGAAT-G-AGGAA-TA-ACT
i Alouatta_puruensis.k141_131505                        C 0 C 0
s Alouatta_seniculus.k141_1531728                            1309 42 -      1692 C---ATA--TTA-A----TCCT-T--TTTCTC------------------------T------AAT-TGCTGAAT-G-AGGAA-TA-ATT
i Alouatta_seniculus.k141_1531728                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3521568 22 +   4113121 C---CTG--GTA-a----gtct-t-------t------------------tctctct------g--------------------------
i Ammotragus_lervia.NIVO01013474.1                      C 0 I 20
s Anoura_caudifer.AnoCau_scaffold_422                      391658 41 -    631301 C----TG--ATA-A----GCCT-T-------TTAT--------------CT--C--T------AAT-TTCTGAAT-G-AGGG--TA-ATT
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            32152 42 +     33004 C---CTG--GTA-A----GTCT-T-------TT----------------CT--CTCT------ATT-TTCTGAGT-G-AGGG--TA-TTT
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 63795 41 +     78111 C---ATA--TCA-A----ACC--T--TTTCTC------------------------T------AAT-TGCTGAAT-G-AGGAA-TA-ATT
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            6738 41 +     22701 C---ATA--TCA-A----ACC--T--TTTCTC------------------------T------AAT-TGCTGAAT-G-AGGAA-TA-ATT
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5750695 41 +   9889416 C---ATA--TCA-A----ACC--T--TTTCTC------------------------T------AAT-TGCTGAAT-G-AGGAA-TA-ATT
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             7284 41 -    104377 C---ATA--TCA-A----ACC--T--TTTCTC------------------------T------AAT-TGCTGAAT-G-AGGAA-TA-ATT
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               7286 41 +     23246 C---ATA--TCA-A----ACC--T--TTTCTC------------------------T------AAT-TGCTGAAT-G-AGGAA-TA-ATT
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_231055                     1173 43 -      2492 C---AT---ATTAA----GACT-T-------TTAT--------------CT--C--T------AAC-CACTGAAT-GTGAGA--TA-AAT
i Aplodontia_rufa.AprRuf_scaffold_231055                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        2089 37 +      9265 C---ATG--TTA-A----GCCT-T-------T------------------------T------AAC-CTCCAAAT-G-AACAG-TA-ATT
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                10075 42 -     29036 C--C-TG--GTA-A----GCCT-T-------TTAT--------------CT--C--T------AAT-TTCTGTGT-G-AGGG--TA-ATT
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9540561 42 +  39197703 C---TTA--TTA-A----TCCT-T--CTTCTC------------------------T------AAT-TGCTGAAT-G-AGGAA-TA-ATT
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             61834 42 +     85812 C---TTA--TTA-A----TCCT-T--CTTCTC------------------------T------AAT-TGCTGAAT-G-AGGAA-TA-ATT
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                12847 42 +     89302 C---TTA--TTA-A----TCCT-T--CTTCTC------------------------T------AAT-TGCTGAAT-G-AGGAA-TA-ATT
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             17348 42 -     58268 C---TTA--TTA-A----TCCT-T--CTTCTC------------------------T------AAT-TGCTGAAT-G-AGGAA-TA-ATT
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             65342 42 +    119057 C---TTA--TTA-A----TCCT-T--CTTCTC------------------------T------AAT-TGCTGAAT-G-AGGAA-TA-ATT
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               7311 42 -     25888 C---TTA--TTA-A----TCCT-T--CTTCTC------------------------T------AAT-TGCTGAAT-G-AGGAA-TA-ATT
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 7822 36 -     16375 C---CCG--TTA-A----GC-T-T-------T------------------------T------TAC-CTCCAAAT-G-AGGAA-TA-ATG
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               1438 36 +      6337 C---CCG--TTA-A----GC-T-T-------T------------------------T------TAC-CTCCAAAT-G-AGGAA-TA-ATG
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26381538 43 +  51448160 C---CTG--TTA-A----GCGT-T-------TTAT--------------CT--C--T------ACT-TTCTGAGTTG-AGGG--TA-TTT
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        6711 43 -     13118 C---CTG--TTA-A----GCGT-T-------TT----------------CT--CTCT------ACT-TTCTGAGTTG-AGGG--TA-TTT
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   44674 41 -     72089 C---CTG--GTA-A----GTCT-T-------TT----------------CT--CTCT------ACT-TTCTGAGT-G-AGGG---A-TTT
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6561295 42 +   6870073 C---CTG--GTA-A----GTCT-T-------CT----------------CT--CTCT------ACT-TTCTGAGT-G-ATGG--TA-TTT
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138141417 42 - 161108492 C---CTG--GTA-A----GTCT-T-------TT----------------CT--CTCT------ANT-TTCTGAGT-G-ATGG--TA-TTT
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     573947 42 -    998990 C---CTG--GTA-A----GTCT-T-------CT----------------CTTTC--T------ACT-TTCTGAGT-G-ATGG--TA-TTT
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136297150 42 - 158972876 C---CTG--GTA-A----GTCT-T-------TT----------------CT--CTCT------AGT-TTCTGAGT-G-ATGG--TA-TTT
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1234231 42 -   1914593 C---CTG--GTA-A----gtct-t-------t------------------tctcttt------act-ttctgagt-g-ATGG--TA-TTT
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               115195 42 -    171031 C---ACA--TTA-A----TCAT-T--TTTCTC------------------------T------AAT-TGCTGAAT-G-AGGGG-TA-ATT
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 14224 42 +    125063 C---ACA--TTA-A----TCAT-T--TTTCTC------------------------T------AAT-TGCTGAAT-G-AGGGG-TA-ATT
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                16267 42 -    216513 C---ACA--TTA-A----TCAT-T--TTTCTC------------------------T------AAT-TGCTGAAT-G-AGGGG-TA-ATT
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        8810 42 -    134917 C---ACA--TTA-A----TCAT-T--TTTCTC------------------------T------AAT-TGCTGAAT-G-AGGGG-TA-ATT
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3220690 42 -   8989139 C---CTG--GTA-A----GCCT-T-------TTAT--------------CT--C--C------ACT-TTCTGAGT-G-AGGG--TA-TTT
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           398391 42 -  15254737 C---CTG--GTA-A----GCCT-T-------TTAT--------------CT--C--C------ACT-TTCTGAGT-G-AGGG--TA-TTT
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2974127 42 +   6889770 C---CTG--GTA-A----GCCT-T-------TTAT--------------CT--C--C------ACT-TTCTGAGT-G-AGGG--TA-TTT
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11520886 42 +  39901454 C---CAG--TTA-A----GCTT-T-------T-----------------CAT-ATCT------AAT-TGCTGAGT-G-AGGA--TA-TTC
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   15911 42 +     87036 C---CAG--TTA-A----GCTT-T-------T-----------------CAT-ATCT------AAT-TGCTGAGT-G-AGGA--TA-TTC
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11267555 42 -  35597290 C---CAG--TTA-A----GCTT-T-------T-----------------CAT-ATCT------AAT-TGCTGAGT-G-AGGA--TA-TTC
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11090088 42 +  39895921 C---CAG--TTA-A----GCTT-T-------T-----------------CAT-ATCT------AAT-TGCTGAGT-G-AGGA--TA-TTC
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16457101 42 -  44759192 C---CAG--TTA-A----GCTT-T-------T-----------------CAT-ATCT------AAT-TGCTGAGT-G-AGGA--TA-TTC
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21326639 22 + 157394656 C---CTG--GTA-A----GTCT-T-------TT----------------CT--CTCT------A--------------------------
i Capra_aegagrus.CM003214.1                             C 0 I 10
s Capra_hircus.CM004562.1                               135707867 22 - 157403528 C---CTG--GTA-A----GTCT-T-------TT----------------CT--CTCT------A--------------------------
i Capra_hircus.CM004562.1                               C 0 I 3
s Carollia_perspicillata.CarPer_scaffold_4436               60862 42 +     67245 C--C-TG--ATA-A----GCCT-T-------T--------------CG--T--CTCT------AAT-TTCTGAGT-G-AGGG--TA-ATT
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   32256 41 +     33760 C---ATG--TTA-A----GTCT-T-------CAT---------------CT--C--T------ACT-TGCTGAAT-A-AAGA--TA-TTT
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   160297 39 -    276539 C---CTG--GTA-A----GCCT-C-------TAAT--------------CT--C--T------ACC-TTCTCAGT-G-A-----TA-TTT
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18892035 42 -  29618158 C---ATA--TTA-A----TCCT-T--TTTCTC------------------------T------AAT-TGCTGAAT-A-AAGAA-TA-ATG
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 9579 42 -     26817 C---ATA--TTA-A----TCCT-T--TTTCTC------------------------T------AAT-TGCTGAAT-A-AAGAA-TA-ATT
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                13822 42 +     25043 C---ATA--TTA-A----TCCT-T--TTTCTC------------------------T------AAT-TGCTGAAT-A-AAGAA-TA-ATT
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4365064 42 +   7569818 C---CTG--TTA-A----GCCT-T-------TTAT--------------CT--C--T------AAT-TGCTGAGT-G-AGAG--TA-TTT
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         4821 42 -      9338 C---CTG--TTA-A----GCCT-T-------TTAT--------------CT--C--T------AAT-TGCTGAGT-G-AGAG--TA-TTT
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6556801 39 +   6739814 C---ATG--TTA-A----CCCT-T-----CTT------------------------T------GAT-TGCTGAAT-G-AGGAA-TA-ATT
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      28275 39 +     60454 C---ATG--TTA-A----CCCT-T-----CTT------------------------T------GAT-TGCTGAAT-G-AGGAA-TA-ATT
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          3482 39 -     21101 C---ATG--TTA-A----CCCT-T-----CTT------------------------T------GAT-TGCTGAAT-G-AGGAA-TA-ATT
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         60792 39 -    107033 C---ATG--TTA-A----CCCT-T-----CTT------------------------T------GAT-TGCTGAAT-G-AGGAA-TA-ATT
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        3671 39 -     17608 C---ATG--TTA-A----TCCT-T-----CTT------------------------T------GAT-TGCTGAAC-G-AGGAA-TA-ATT
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                           830 39 +     45019 C---ATG--TTA-G----TCCT-T-----CTT------------------------T------GAT-CGCTGAAC-G-AGGAA-TA-ATT
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                            914 39 +     15177 C---ATG--TTA-A----TCCT-T-----CTT------------------------T------GAT-TGCTGAAC-G-AGGAA-TA-ATT
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          3714 39 +     16677 C---ATG--TTA-A----TCCT-T-----CTT------------------------T------GAT-TGCTGAAC-G-AGGAA-TA-ATT
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           25884 39 +     35983 C---ATG--TTA-A----TCCT-T-----CTT------------------------T------GAT-TGCTGAAC-G-AGGAA-TA-ATT
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11992412 39 +  12117833 C---ATG--TTA-G----TCCT-T-----CTT------------------------T------GAT-CGCTGAAT-G-AGGAA-TA-ATT
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46479170 39 +  46592721 C---ATG--TTA-A----TCCT-T-----CTT------------------------T------GAT-TGCTGAAC-G-AGGAA-TA-ATT
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      42724 39 -     45581 C---ATG--TTA-A----TCCT-T-----CTT------------------------T------GAT-TGCTGAAC-G-AGGAA-TA-ATT
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       3726 39 +     35577 C---ATG--TTA-G----TCCT-T-----CTT------------------------T------GAT-CGCTGAAC-G-AGGAA-TA-ATT
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        3499 39 -     25661 C---ATG--TTA-A----TCCT-T-----CTT------------------------T------GAT-TGCTGAAC-G-AGGAA-TA-ATT
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        3478 39 -     17744 C---ATG--TTA-A----TCCT-T-----CTT------------------------T------GAT-TGCTGAAC-G-AGGAA-TA-ATT
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        23084 39 +     37128 C---ATG--TTA-A----TCCT-T-----CTT------------------------T------GAT-TGCTGAAC-G-AGGAA-TA-ATT
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           3919 18 -      6963 -------------------------------------------------------------------TATTGACT-G-AGGA--TA-TTT
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      I 20 C 0
s Cheirogaleus_major.k141_1157592                           60093 37 -     68416 C---ATG--TTA-A----GCTT-T-------T------------------------T------TAT-CTCCAAAT-G-AGGAA-TA-ATG
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            9145 37 +     13308 C---ATG--TTA-A----GCTT-T-------T------------------------T------TAT-CTCCAAAT-G-AGGAA-TA-ATG
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             6852 42 -     18223 C---ACA--TTA-A----TCCT-T--TTTCTC------------------------T------AAT-TGCTGAAT-G-AGGAA-TA-ATT
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             23870 42 +     25473 C---ACA--TTA-A----TCCT-T--TTTCTC------------------------T------AAT-TGCTGAAT-G-AGGAA-TA-ATT
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           42910 42 +     57117 C---ACA--TTA-A----TCCT-T--TTTCTC------------------------T------AAT-TGCTGAAT-G-AGGAA-TA-ATT
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          47589 42 +     54541 C---ACA--TTA-A----TCCT-T--TTTCTC------------------------T------AAT-TGCTGAAT-G-AGGAA-TA-ATT
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15962866 42 +  43084221 C---AAG--TTC-T----GTCT-T-------TTAT--------------CTT----T------ACT-TGCTGAAT-G-GGTG--TA-TTT
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         72396 42 +    196370 C---ACA--TTA-A----TCCT-T--TTTCTC------------------------T------AAT-TGCTGAAT-G-AGGGG-TA-ATT
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          16576 42 +     40510 C---ACA--TTA-A----TCCT-T--TTTCTC------------------------T------AAT-TGCTGAAT-G-AGGGG-TA-ATT
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15141081 39 -  15256731 C---ATG--TTA-A----TCCT-T-----CTT------------------------T------GAT-TGCTGAAT-G-AGGAA-TA-ATT
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      35690 39 -     53260 C---ATG--TTA-A----TCCT-T-----CTT------------------------T------GAT-TGCTGAAT-G-AGGAA-TA-ATT
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101146249 39 + 101219884 C---ATG--TTA-A----TCCT-T-----CTT------------------------T------GAT-TGCTGAAT-G-AGGAA-TA-ATT
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                17659 41 -     21363 A---AGT--GTA-T----GC-T-T-------TT---------------AC---CTTT------AAT-TGTTGAAT-G-AGGA--TA-TTT
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           762964 41 +    964067 A---AGT--GCA-T----GC-T-T-------TT---------------AC---CTTT------AAT-TGTTGAAT-G-AGGA--TA-TTT
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10888238 39 +  10971483 C---ATA--TTA-A----TCCT-T-----CTT------------------------T------GAT-TGCTGAAT-G-AGGAA-TA-ATT
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147666166 39 + 156195979 C---ATA--TTA-A----TCCT-T-----CTT------------------------T------GAT-TGCTGAAT-G-AGGAA-TA-ATT
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            18149 39 +     23629 C---ATA--TTA-A----TCCT-T-----CTT------------------------T------GAT-TGCTGAAT-G-AGGAA-TA-ATT
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60620722 36 +  78930452 T---CTT--TTA-A----GCCT-T-------TT----------------CAT-CTCT------AAT-TTCTCAGT-G-AA----------
i Condylura_cristata.JH655880.1                         C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 279515 41 -    399297 C---ATG--CTA-A----G-TG-T-------TT--------------G-C---CACT------AAT-TTCTGAAT-G-GAGA--TA-TTT
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53031620 40 +  72327488 C---ATG--TGA-A----G-CA-T-------TT---------------AC---CTCT------AGT-TGCTGAAT-G-GAGA--CA-C-T
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_848148              698 41 +      1327 G----TG--CTA-A----GCCT-T-------TTAT--------------CT--C--T------AAT-TGCTGAGT-T-AGAG--AA-TTT
i Crocidura_indochinensis.CroInd_scaffold_848148        C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            53200 42 -     70449 C---CAG--TTA-A----GCCT-T-------T-----------------CAT-ATCT------AAT-TGCTGAGT-G-AGGA--TA-TTT
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 32222 42 -     67205 C---AAG--TTA-T----GCCT-T-------TAAT--------------CTT----T------AAT-TGCTGAAT-G-GAGA--TA-TTT
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          184768 42 -   6883506 C---ACA--TTA-A----GCCT-T-------TAAT--------------CTT----T------AAT-TATTGACT-G-AGGA--TA-TCT
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16845958 37 +  31942871 C---ATG--TTA-A----GCCT-T-------T------------------------T------TAC-CTCCAAAT-G-AGGAA-TA-ATT
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80038162 42 -  96802777 C---CTG--TTA-A----Gcct-t-------t------------------tctctct------act-ttctGAGT-G-AGGG--TA-TTG
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18700153 42 -  18957592 C--C-TG--GTA-A----GCCT-T-------TTAT--------------CT--C--T------AAT-TTCTGAGT-G-AGGG--TA-ATT
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 323716 42 +    993696 C---CTG--TTA-A----GCCT-T-------TTAT--------------CT--C--T------AAT-TGCTGAGT-G-AGAG--TA-TTT
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   4355 40 +    151128 -----TG--TTA-A----GCCT-T-------TTAT--------------CT--C--T------AAT-TGCTGAGT-G-AGAG--TA-TTT
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   158065 42 +    228994 C---AAG--TTA-C----GCTT-T-------TTAT--------------CTT----T------ACT-TGCTGAAT-G-GAGG--TA-CTT
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3658257 20 +   4240102 --------------------------------------------------------T------A-T-TG-ATATT-T-GAGA--TA-TTT
i Dipodomys_ordii.KN672545.1                            I 894 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                   615 35 -     11986 ---------ATA-A----GCCT-T-------TAT---------------CTT----T------A-T-TG-ATATT-T-GAGA--TA-TTT
i Dipodomys_stephensi.DipSte_scaffold_84338             N 0 C 0
s Eidolon_helvum.KE772537.1                                 13425 42 +     24177 C---CTG--GTA-a----gcct-t-------t------------------tatttct------aat-ttctgaat-g-ataa--ta-ttt
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1492900 40 +   1727528 C---CTG--GTA-A----GTCT-T-------TT----------------CT--C--T------ACT-TTCTGAGT-G-AGGG--TA-TTT
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7829868 41 +  15467074 C---TCg--ctt-a----cttt-t-------t-------------------ttcttt------agt-tgttAAAT-G-ACAA--TA-TGT
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        240595 41 -    369425 T---ATG--CTA-A----G-CA-T-------TT---------------AC---CACT------AGT-TGCTGAAT-G-GAGA--TA-CTT
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01204657.1                             29 41 +      1708 T---ATG--CTA-A----G-CA-T-------TT---------------AC---CACT------AGT-TGCTGAAT-G-GAGA--TA-CTT
i Ellobius_talpinus.LOJH01204657.1                      N 0 C 0
s Enhydra_lutris.KZ291749.1                              85873284 42 +  99434291 C---CAG--TTA-A----GCTT-T-------T-----------------CAT-ATCT------AAT-TGCTGGGT-G-AGAA--TA-TTT
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4708115 42 +   6522550 C---TTG--GTA-A----GCCT-T-------T-----------------C-ACCTCT------AAT-TTCTAAGG-G-AGAG--TA-ATT
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5854354 42 -   7175178 C---TTA--TTG-A----GGCT-T-------TTAT--------------CT--C--T------AAA-TGCTAAGT-G-AGGG--TA-TTT
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13352854 42 +  41866177 C---TTA--TTG-A----GGCT-T-------TTAT--------------CT--C--T------AAA-TGCTAAGT-G-AGGG--TA-TTT
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          14344 42 +     92910 C---TTA--TTG-A----GGCT-T-------TTAT--------------CT--C--T------AAA-TGCTAAGT-G-AGGG--TA-TTT
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11641632 38 +  16010500 ----------TC-A----GATT-T-------T-------------CAG-CT----AT------AATTT-CTAAAT-G-AATG-TTA-TTT
i Erinaceus_europaeus.JH835290.1                        N 0 C 0
s Erythrocebus_patas.Contig8                             48778260 39 -  48907691 C---ATG--TTA-A----TCCT-T-----CTT------------------------T------GAT-TGCTGAAT-G-AGGAA-TA-ATT
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          316379 43 +    330699 C---CTG--TTA-A----GCGT-T-------TTAT--------------CT--C--T------ACT-TTCTGAGTTG-AGGG--TA-TTT
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             62834 42 +     89355 C---CTG--TTA-A----GCGT-T-------TTAT--------------CT--C--T------ACT-TTCTGAGT-G-AGGG--TA-TTT
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              6132 37 +     13586 C---ACG--TTA-A----GCTT-T-------T------------------------T------TAC-CTCCAAAT-G-AGGAA-TA-ATG
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               6064 37 -      6809 C---ATG--TTA-A----GCTT-T-------T------------------------T------TAC-CTCCAAAT-G-AGGAA-TA-ATG
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            12538 37 +     36558 C---ACG--TTA-A----GCTT-T-------T------------------------T------TAC-CTCCAAAT-G-AGGAA-TA-ATG
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             8855 37 +     60246 C---ACG--TTA-A----GCTT-T-------T------------------------T------TAC-CTCCAAAT-G-AGGAA-TA-ATG
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                12337 37 +    109717 C---ATG--TTA-A----GCTT-T-------T------------------------T------TAC-CTCCAAAT-G-AGGAA-TA-ATG
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                  322 37 -     19505 C---ACG--TTA-A----GCTT-T-------T------------------------T------TAC-CTCCAAAT-G-AGGAA-TA-ATG
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                16997 37 +     27497 C---ATG--TTA-A----GCTT-T-------T------------------------T------TAC-CTCCAAAT-G-AGGAA-TA-ATG
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           19453 37 +     26808 C---ACG--TTA-A----GCTT-T-------T------------------------T------TAC-CTCCAAAT-G-AGGAA-TA-ATG
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                34191 37 +     46535 C---ATG--TTA-A----GCTT-T-------T------------------------T------TAC-CTCCAAAT-G-AGGCA-TA-ATG
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              16917 37 -     29447 C---ATG--TTA-A----GCTT-T-------T------------------------T------TAC-CTCCAAAT-G-AGGAA-TA-ATG
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129894116 42 - 159252932 C---CAG--TTA-A----ACTT-T-------T-----------------CAT-ATAT------AAT-TACTGAGT-G-AGGA--TA-TTT
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129281200 42 - 158578461 C---CAG--TTA-A----ACTT-T-------T-----------------CAT-ATAT------AAT-TACTGAGT-G-AGGA--TA-TTT
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 22340 42 +     52776 C---CAG--TTA-A----ACTT-T-------T-----------------CAT-ATAT------AAT-TACTGAGT-G-AGGA--TA-TTT
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13892528 42 -  19261668 C---AAG--TTA-A----GCCT-T-------TTAT--------------CTT----T------AAT-TGCTGAAT-G-GAGG--TA-TTT
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     211995 37 -    847004 C---ATG--TTA-A----GCCT-T-------T------------------------T------AAC-CTTCAAAT-G-AGCAG-TA-ATT
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           14366 37 -     43889 C---ATG--TTA-A----GCCT-T-------T------------------------T------AAC-CTCCAAAT-G-AGCAG-TA-ATT
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          11435 37 +     27357 C---ATG--TTA-A----GCCT-T-------T------------------------T------AAC-CTCCAAAT-G-AGCAG-TA-ATT
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               157464 19 +    324696 C---ATG--TTA-A----GCCT-T-------T------------------------T------AAC-t----------------------
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 I 1695
s Giraffa_tippelskirchi.LVKQ01S012154.1                    182694 42 -    189561 C---CTG--GTA-A----GTCT-T-------TT----------------CT--CTCT------ACT-TTCTGAGT-G-AGGG--TA-TTT
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           14934 42 -     18683 C---ATG--AT-AA----GACT-T-------TT----------------C--CCTCT------AAT-TGTTGAAT-G-GAGG--TA-TTT
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               6841 39 -     14630 C---ATA--TTA-A----TCCT-T-----CTT------------------------T------AAT-TGCTGAAT-G-AGGAA-TA-ATT
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119653941 39 - 195582420 C---ATA--TTA-A----TCCT-T-----CTT------------------------T------AAT-TGCTGAAT-G-AGGAA-TA-ATT
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   78345 43 +    118900 T---AGG--ATAAA----GATG-T-------TTT---------------C---CTCT------AAT-TGTGAAAT-G-GAGG--TA-TTT
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         2922 37 +     10286 C---ATG--TTA-A----GCTT-T-------T------------------------T------TAC-CTCCAAAT-G-AGGAA-TA-ATG
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             1402 37 -     11661 C---ATG--TTA-A----GCTT-T-------T------------------------T------TAC-CTCCAAAT-G-AGGAA-TA-ATG
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             6728 37 +     56096 C---ATG--TTA-A----GCTT-T-------T------------------------T------TAC-CTCCAAAT-G-AGGAA-TA-ATG
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        29977 37 -     42470 C---ATG--TTA-A----GCTT-T-------T------------------------T------TAC-CTCCAAAT-G-AGGAA-TA-ATG
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        46605 37 -     54384 C---ATG--TTA-A----GCTT-T-------T------------------------T------TAC-CTCCAAAT-G-AGGAA-TA-ATG
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              18395 42 +     53719 C---CAG--TTA-A----GCCT-T-------T-----------------CAT-ATCT------AAT-TGCTGAGT-G-TGGA--TA-TTT
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                28927 22 -     91191 C---CTG--ATA-A----GACT-T-------TT----------------CT--CTCT------A--------------------------
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 I 10
s Heterocephalus_glaber.JH602058.1                        2552247 32 +  31725842 T---AAG--TTA-A----GCCT-T-------TTAT--------------CTT----T------AAT-TGCTGAAT---------------
i Heterocephalus_glaber.JH602058.1                      C 0 I 10
s Hippopotamus_amphibius.HipAmp_scaffold_1308              148270 25 +    277961 C---CTG--GTA-A----GTCT-T-------CTAT--------------CT--C--T------ACC-T----------------------
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      279558 42 -    477199 C---CTG--GTA-A----GCCT-T-------TTAT--------------CT--C--T------GAT-TTCTAAGT-G-AGGA--TA-TTT
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_345408               555 42 -       919 T---CTG--GTA-A----GCCT-T-------TTAT--------------CT--C--T------GAT-TTCTAAGT-G-AGGG--TA-TTT
i Hipposideros_galeritus.HipGal_scaffold_345408         C 0 I 41
s Hoolock_leuconedys.ctg79                                      6531 39 -   7690867 C---ATA--TTA-A----TCCT-T-----CTT------------------------T------AAT-TGCTGAAT-G-AGGAA-TA-ATT
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 18466 42 -     67322 C---CAG--TTA-A----GCCT-T-------T-----------------CAT-ATCT------AAT-TGCTGAGT-G-AGGG--TA-TTT
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hylobates_abbotti.k141_164775                              1314 39 -      2073 C---ATA--TTA-A----TCCT-T-----CTT------------------------T------AAT-TGCTGAAT-G-AGGAA-TA-ATT
i Hylobates_abbotti.k141_164775                         C 0 C 0
s Hylobates_agilis.k141_1362131                               323 39 +      1075 C---ATA--TTA-A----TCCT-T-----CTT------------------------T------AAT-TGCTGAAT-G-AGGAA-TA-ATT
i Hylobates_agilis.k141_1362131                         C 0 I 32
s Hylobates_klossii.k141_183401                               867 39 -      1272 C---ATA--TTA-A----TCCT-T-----CTT------------------------T------AAT-TGCTGAAT-G-AGGAA-TA-ATT
i Hylobates_klossii.k141_183401                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14626219 39 -  25970782 C---ATA--TTA-A----TCCT-T-----CTT------------------------T------AAT-TGCTGAAT-G-AGGAA-TA-ATT
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_950183                              915 39 +      2027 C---ATA--TTA-A----TCCT-T-----CTT------------------------T------AAT-TGCTGAAT-G-AGGAA-TA-ATT
i Hylobates_muelleri.k141_950183                        C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             35379 39 -     60944 C---ATA--TTA-A----TCCT-T-----CTT------------------------T------AAT-TGCTGAAT-G-AGGAA-TA-ATT
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     7319 42 +     22540 C---AAG--TTA-G----GCCT-T-------TTAT--------------CTT----T------AAT-TGCTGAAT-A-GAAG--TA-ATT
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7127164 42 +  13083262 c---ata--at-aa----attt-t-------t------------------tatctcT------AAC-CATTAAAT-G-GACA--TA-TTT
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_5141390                                   1455 36 -      3181 C---CTG--TTA-A----GCTT-T-------C------------------------T-------AC-CTCCAAAT-G-AGGAA-TA-ATG
i Indri_indri.k141_5141390                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              10369 42 +     17520 C---CTG--TTA-A----GCCT-T-------TTAT--------------CT--C--T------ACT-TTCTGAGT-G-AGGG--TA-TTT
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH727545.1                                 2334 53 -      4668 C---Atc--ctt-a----gatt-c-------t-------tttttttttttttttggt------agt-tagTGAAA-G-GGGT--TA-TTT
i Jaculus_jaculus.JH727545.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               24972 42 +     37189 C---CTG--TTA-A----GCCT-T-------TT----------------CT--CTCT------ACC-TTCTGAGT-G-AGGG--TA-TTT
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          51432 42 -    147782 C---TTA--TTA-A----TCCT-T--CTTCTC------------------------T------AAT-TGCTGAAT-G-AGGAA-TG-ATT
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    4785 42 +     26176 C---TTG--GTA-A----GCTT-T-------T-----------------CAT-CTCT------AAT-TTCTGAGT-G-AGAG--TA-ATT
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258408280 37 - 285822530 C---ATG--TTA-A----GCTT-T-------T------------------------T------TAC-CTCCAAAT-G-AGGAA-TA-ATG
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        25031 37 +     39228 C---ATG--TTA-A----GCTC-T-------T------------------------C------TAC-CTCCAAAT-G-AGGAA-TA-ATG
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            54417 37 +     63517 C---ATG--TTA-A----GCTC-T-------T------------------------T------TAC-CTCCAAAT-G-AGGAA-TA-ATG
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        79679 37 +    116806 C---ATG--TTA-A----GCTC-T-------T------------------------T------TAC-CTCCAAAT-G-AGGAA-TA-GTG
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     32670 37 -     33031 C---ATG--TTA-A----GCTC-T-------T------------------------C------TAC-CTCCAAAT-G-AGGAA-TA-ATG
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3087147 42 -   3498232 C---CAA--TTA-A----GCTT-T-------T-----------------CAT-ATCT------AAT-TGTTGAAT-G-AGGA--TA-TTT
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    14489 22 +     22452 --------------------------------------------------------T------AAT-TGCTAAAT-T-GAGA--CG-TCA
i Lepus_americanus.LepAme_scaffold_62849                I 11 I 332
s Lipotes_vexillifer.KE558548.1                            137325 42 +   3060487 C---CTG--TTA-A----GCCT-T-------TTAT--------------CT--C--T------ACT-TTCTGAGT-G-AGGG--TA-TTT
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19249878 39 +  19376315 C---ATG--TTA-A----TCCT-T-----CTT------------------------T------GAT-TGCTGAAC-G-AGGAA-TA-ATT
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           11717 37 +     84689 C---ATG--TTA-A----GCCT-T-------T------------------------T------AAC-CTCCAAAT-G-AGCAG-TA-ATT
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3779466 37 +   6799190 C---ATG--TTA-A----GCCT-T-------T------------------------T------AAC-CTCCAAAT-G-AGCAG-TA-ATT
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20596272 56 -  62548349 T---atg--tca-a----gctt-t-------t----ttttttttttttttggtcttt------aat-tGTCGAAG-G-GGGA--TA-TTT
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11089544 42 +  39895028 C---CAG--TTA-A----ACTT-T-------T-----------------CAT-ATCT------AAT-TGCTGAGT-G-AGGA--TA-TTC
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             21635 39 +     74745 C---ATA--TTA-A----TCCT-C-----CTT------------------------T------GAT-TGCTGAAT-G-AGGAA-TA-ATT
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12708095 39 +  12821369 C---ATA--TTA-A----TCCT-C-----CTT------------------------T------GAT-TGCTGAAT-G-AGGAA-TA-ATT
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                 673 39 -     26467 C---ATA--TTA-A----TCCT-C-----CTT------------------------T------GAT-TGCTGAAT-G-AGGAA-TA-ATT
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           48540 39 +     63263 C---ATA--TTA-A----TCCT-C-----CTT------------------------T------GAT-TGCTGAAT-G-AGGAA-TA-ATT
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                  650 39 -     26361 C---ATA--TTA-A----TCCT-C-----CTT------------------------T------GAT-TGCTGAAT-G-AGGAA-TA-ATT
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 3827 39 -      7381 C---ATA--TTA-A----TCCT-C-----CTT------------------------T------GAT-TGCTGAAT-G-AGGAA-TA-ATT
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  47065 39 -     79256 C---ATA--TTA-A----TCCT-C-----CTT------------------------T------GAT-TGCTGAAT-G-AGGAA-TA-ATT
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196037167 39 + 196197964 C---ATA--TTA-A----TCCT-C-----CTT------------------------T------GAT-TGCTGAAT-G-AGGAA-TA-ATT
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11447333 39 +  11645122 C---ATA--TTA-A----TCCT-C-----CTT------------------------T------GAT-TGCTGAAT-G-AGGAA-TA-ATT
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   6019 39 -     46448 C---ATA--TTA-A----TCCT-C-----CTT------------------------T------GAT-TGCTGAAT-G-AGGAA-TA-ATT
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                3685 39 -     13212 C---ATA--TTA-A----TCCT-C-----CTT------------------------T------GAT-TGCTGAAT-G-AGGAA-TA-ATT
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 17362 39 -     55006 C---ATA--TTA-A----TCCT-C-----CTT------------------------T------GAT-TGCTGAAT-G-AGGAA-TA-ATT
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43842468 39 +  43892939 C---ATA--TTA-A----TCCT-C-----CTT------------------------T------GAT-TGCTGAAT-G-AGGAA-TA-ATT
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               18649 39 -     24607 C---ATA--TTA-A----TCCT-C-----CTT------------------------T------GAT-TGCTGAAT-G-AGGAA-TA-ATT
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               6016 39 -     27140 C---ATA--TTA-A----TCCT-C-----CTT------------------------T------GAT-TGCTGAAT-G-AGGAA-TA-ATT
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                702141 42 +    802869 C---CTG--GTA-A----GCCT-T-------TTAT--------------CT--C--T------AAT-TTCTGAGT-G-ATAA--TA-TTT
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43439050 39 -  43563597 C---ATG--TTA-A----TCCT-T-----CTT------------------------T------GAT-TGCTGAAT-G-AGGAA-TA-ATT
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4451864 39 -   4543643 C---ATG--TTA-A----TCCT-T-----CTT------------------------T------GAT-TGCTGAAT-G-AGGAA-TA-ATT
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            147221 41 +    252755 T---CT---TTA-A----GCCT-T-------TTAT--------------CT--C--T------AGT-TGGTGCAT-G-AGAG--TA-TTt
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             37364 41 +     58827 T---CT---TTA-A----GCCT-T-------TTAT--------------CTT----T------AGT-TGGTGCAT-G-AGAG--TA-TTt
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36875072 42 +  64221397 c---ata--at-aa----attt-t-------t------------------tatctcT------AAC-CATTGAAT-A-GACA--TA-TTT
i Marmota_marmota.CZRN01000005.1                        C 0 I 16
s Mellivora_capensis.MelCap_flattened_line_15433             2183 42 -     87323 C---CAG--TTA-A----GCTT-T-------T-----------------CAT-ATCT------AAT-TGCTGGGT-G-AGGA--TA-TTT
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               14538 30 +     15977 -----------------------T-------TT---------------AC---CTAT------AAT-GGATGAAT-A-GAGA--TA-TTT
i Meriones_unguiculatus.MerUng_scaffold_52233           I 2 C 0
s Mesocricetus_auratus.KB708139.1                         1048216 41 -  26018355 C---ATG--TGA-A----A-CA-T-------TT---------------ACTT-C--T------AGT-TGCTGAAT-G-GAGC--TA-CTT
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_475714                    477 42 +       551 C---CTG--TTA-A----GCCT-T-------TTAT--------------CT--C--T------ACT-TTCTGAGT-G-AGGG--CA-TTT
i Mesoplodon_bidens.MesBid_scaffold_475714              C 0 C 0
s Microcebus_murinus.CM007691.1                          16511312 39 +  47401472 T---GTA--TTA-A----GCTT-T-------T------------------------T-T-T--TAC-CTCCAAAT-G-AGGAA-TA-ATG
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  39485 12 -     48017 --------------------------------------------------------A------AAA-TGTTCAAA---------------
i Microgale_talazaci.MicTal_scaffold_34660              I 23 I 8
s Micronycteris_hirsuta.MicHir_scaffold_37978               24055 16 -     32043 ---------------------------------------------------------------------CTGAGT-G-AGGG--TA-ATT
i Micronycteris_hirsuta.MicHir_scaffold_37978           I 19 C 0
s Microtus_ochrogaster.CM001673.1                        22820965 41 -  98408828 T---ATG--CTA-A----G-CA-T-------TT--------------G-CT-AC--T------AGT-TGCAGAAT-G-GAGA--TA-CTT
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8212147 43 +  10048721 T---TTG--GGA-A----GCCT-T-------TTAT--------------CT--C--T------AAT-TTCTGAGC-G-AGGG--CAAATT
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            36636 43 +     45743 T---TTG--GGA-A----GCCT-T-------TTAT--------------CT--C--T------AAT-TTCTGAGC-G-AGGG--CAAATT
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         3611 39 +     29742 C---ATG--TTA-A----TCCT-T-----CTT------------------------T------GAT-TGCTGAAC-G-AGGAA-TA-ATT
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        12674 42 -    104932 C---CAA--TTA-A----GCTT-T-------T-----------------CAT-ATCT------AAT-TGTTGAAT-G-AGGA--TA-TTT
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     6701 39 +      8497 T---GTG--TTA-A----GCTT-T-------T------------------------T-T-T--AAC-CTCCAAAT-G-AGGAA-TA-ATG
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 147752 42 +    154973 C---CTG--TTA-A----GCCT-T-------TT----------------CT--CTCT------ACT-TTCTGAGT-G-AGGG--TA-TTG
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                162575 42 +    265003 C--C-TG--GTA-A----GCCT-T-------TTAT--------------CT--C--T------AAT-TTCTGAGC-G-AGAG--TA-ATT
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  2945 38 -     19904 C---CTG--GCA-A----GTCT-T-------TT----------------C------T------ACT-TTCTGAGT-G-AGGG--TA-TTT
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  146094 42 -    168139 C---CAG--TTA-A----GCCT-T-------T-----------------CAT-ATCT------AAT-TGCTGAGT-G-AGGA--TA-TTT
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          23590 42 -    100666 C---TTG--GTA-A----GCCT-T-------T-----------------CAT-CTCT------AAT-TTCTGAGT-G-AGAG--TA-ATT
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             13444 43 +     98495 T---ATT--ATGAA----GCCT-T-------TTTT--------------CT--C--T------AAT-TGTGGAAT-G-GAGG--TA-TTT
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4425548 42 -  28371801 C---CAG--TTA-A----GCTT-T-------T-----------------CAT-ATCT------AAT-TGCTGGGT-G-AGGA--TC-TTT
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     91548 42 -    117718 C---AAG--TTA-T----GGCT-T-------TTAT--------------CTT----T------AAG-TGCTGAAT-G-GAGA--TA-TTT
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               970455 42 +   8389877 C---TTG--GTA-A----ACCT-T-------T-----------------CAT-CTCT------AAT-TTCTGAGT-G-AGAG--TA-ATT
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5021880 42 +   6462685 C---TTG--GTA-A----GCCT-T-------T-----------------CAT-CTCT------AAT-TTCTGAGT-G-AGGG--TA-ACT
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3467958 42 -   3747815 C---TTG--GTA-A----ACCT-T-------T-----------------CAT-CTCT------AAT-TTCTGAGT-G-AGAG--TA-ATT
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        13201 42 +     66751 C---TTG--GTA-A----GCCT-T-------T-----------------CAT-CTCT------AAT-TTCTGAGT-G-AGAG--TA-ATT
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             6198 45 -      8794 ATGCACA--TTA-T----GTCT-T-------TT---------------AC---CTTT------AAC-TGTTGAAT-G-AAGA--TA-TTT
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nasalis_larvatus.k141_153429                              10088 39 +     48152 C---ATA--TTA-A----TTCT-T-----CTT------------------------C------GAT-TGCTGAAT-G-AGGAA-TA-ATT
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4486064 42 -  14209539 C---CAA--TTA-A----GCTT-T-------T-----------------CAT-ATCT------AAT-TGTTGAAT-G-AGGA--TA-TTT
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3952364 42 -   4490290 C---CTG--TTA-A----Gcct-t-------t------------------tctctct------act-ttctgAGT-G-AGGG--TA-TTT
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Nomascus_annamensis.k141_224620                             685 39 -      2316 C---ATA--TTA-A----TCCT-T-----CTT------------------------T------AAT-TGCTGAAT-G-AGGAA-TA-ATT
i Nomascus_annamensis.k141_224620                       C 0 C 0
s Nomascus_concolor.k141_226614                              2782 39 -      5092 C---ATA--TTA-A----TCCT-T-----CTT------------------------T------AAT-TGCTGAAT-G-AGGAA-TA-ATT
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_1032971                            356 39 -      1918 C---ATA--TTA-A----TCCT-T-----CTT------------------------T------AAT-TGCTGAAT-G-AGGAA-TA-ATT
i Nomascus_gabriellae.k141_1032971                      C 0 I 28
s Nomascus_siki_b.tarseq_80                             26534 39 -  18771707 C---ATA--TTA-A----TCCT-T-----CTT------------------------T------AAT-TGCTGAAT-G-AGGAA-TA-ATT
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  4204 39 +      4512 C---ATA--TTA-A----TCCT-T-----CTT------------------------T------AAT-TGCTGAAT-G-AGGAA-TA-ATT
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                32328 42 +   3668941 C---CAG--TTA-A----GCTT-T-------T-----------------CAT-ATCT------AAT-TGCTGAGT-G-AGGA--TA-TTC
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65568171 37 -  95554990 C---ATG--TTA-A----GCCT-T-------T------------------------T------AAC-CTCCAAAT-G-AGCAG-TA-ATT
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            4897 37 +      6470 C---ATG--TTA-A----GCCT-T-------T------------------------T------AAC-CTCCAAAT-G-AGCAG-TA-ATT
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65670504 37 +  89412551 C---ATG--TTA-A----GCCT-T-------T------------------------T------AAC-CTCCAAAT-G-AGCAG-TA-ATT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Octodon_degus.JH651621.1                                3687048 42 +  10294119 C---AAG--TTA-T----GCCT-T-------TTAT--------------CTT----T------AAT-TGCTGAAT-G-AAGA--TA-TTT
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             680726 42 -   3126709 C---CAA--TTA-A----GCTT-T-------T-----------------CAT-ATCT------AAT-TGTTGAAT-G-AGGA--TA-TTT
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1081117 42 +   1425656 C---CTG--GTA-A----GTCT-T-------TT----------------CT--CTCT------ACT-TTCTGAGT-G-AGGG--TA-TTT
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         38420 42 +     78940 C---CTG--GTA-A----GTCT-T-------TT----------------CT--CTCC------ACT-TTCTGAGT-G-AGGG--TA-TTT
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  126230 41 +    145789 T---ATG--CTA-A----G-CA-T-------TT---------------ACT-AC--T------AGC-TGCTGAAT-G-GAGA--TA-CTT
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  38415 41 +     62360 C---ATG--CTA-A----G-CA-T-------TT---------------AC---CTCT------AGT-TGCTGAAT-G-GGCA--CA-TGT
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7226049 42 -   7562323 C---CTG--TTA-A----GCCT-T-------TTAT--------------CT--C--T------ACT-TTCTGAGT-G-AGGG--TA-TTT
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              61154 44 -     66828 C---ATG--TTG-A----GCCT-T-------TT---------------ACT-CCTTT------AAT-TGTTTAAC-A-AGGA--TA-TTT
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141877527 22 + 163896628 --------------------------------------------------------T------AAT-TGCTaaat-t-gaga--ca-tca
i Oryctolagus_cuniculus.CM000803.1                      I 11 I 327
s Otocyon_megalotis.JAEUCK010005121.1                      309621 42 -    505867 C---CAG--TTA-A----GCTT-T-------T-----------------CAT-AACT------AAT-TGCTGAGT-G-AGGA--TA-TTC
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        1810 37 -     53940 C---ATG--TTA-A----GCCT-T-------T------------------------T------AAC-CTCCAAAT-G-AGCAG-TA-ATT
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18009791 37 -  38779656 C---ATG--TTA-A----GCCT-T-------T------------------------T------AAC-CTCCAAAT-G-AGCAG-TA-ATT
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134078719 22 - 275406953 C---CTG--GTA-A----GTCT-T-------TT----------------CT--CTCT------A--------------------------
i Ovis_aries.CM001582.2                                 C 0 I 10
s Ovis_canadensis.OviCan_scaffold_6251                      79933 22 +    140051 C---CTG--GTA-A----GTCT-T-------TT----------------CT--CTCT------A--------------------------
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 I 10
s Panthera_onca.PanOnc_flattened_line_1615                  35483 42 +    295523 C---CAG--TTA-A----ACTT-T-------T-----------------CAT-ATAT------AAT-TACTGAGT-G-AGGA--TA-TTT
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3639233 42 +  18214204 C---CAG--TTA-A----ACTT-T-------T-----------------CAT-ATAT------AAT-TACTGAGT-G-AGGA--TA-TTT
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5028909 42 -   6340057 C---CAG--TTA-A----ACTT-T-------T-----------------CAT-ATAT------AAT-TACTGAGT-G-AGGA--TA-TTT
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1067568 42 -   1292953 C---CTG--GTA-A----GTCT-T-------TT----------------CT--CTCT------ACT-TTCTGAGT-G-AGGG--TA-TTT
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188157844 39 - 188283584 C---ATG--TTA-A----TCCT-T-----CTT------------------------T------GAT-TGCTGAAC-G-AGGAA-TA-ATT
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                               936 39 +     25005 C---ATG--TTA-A----TCCT-T-----CTT------------------------T------GAT-TGCTGAAC-G-AGGAA-TA-ATT
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47515221 39 +  47705337 C---ATG--TTA-A----TCCT-T-----CTT------------------------T------GAT-TGCTGAAC-G-AGGAA-TA-ATT
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 69211 39 -    104429 C---ATG--TTA-A----TCCT-T-----CTT------------------------T------GAT-TGCTGAAC-G-AGGAA-TA-ATT
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    7740 39 +     14967 C---ATG--TTA-A----TCCT-T-----CTT------------------------T------GAT-TGCTGAAC-G-AGGAA-TA-ATT
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 3605 39 -      7628 C---ATG--TTA-A----TCCT-T-----CTT------------------------T------GAT-TGCTGAAC-G-AGGAA-TA-ATT
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    116971 42 -    135482 C---CAG--TTA-A----GCCT-T-------T-----------------CAT-ATCT------AAT-TTCTGAGT-G-AGGA--TA-TTT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           6495 36 -     23713 C---ATG--TT--A----GCCT-T-------T------------------------T------AAC-CTCCAAAT-G-AGCAG-TA-ATT
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            25808 37 -     27972 C---ATG--TTA-A----GCCT-T-------T------------------------T------AAC-CTCCAAAT-G-AGCAG-TA-ATT
i Perodicticus_potto.k141_713187                        C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4951798 41 -   8017169 C---ATG--CTA-A----G-TT-T-------TT---------------AC---CTAT------AGT-TGCTGAAT-G-GAGA--CA-TTT
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    14772 34 -     36578 C---AAG--TTA-A----AGAT-T-------TTAT------------G--TT----T------AAT-TTCTCTAT-A-G-----------
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071               507 42 +      8220 C---CTG--TTA-A----GCCT-T-------TT----------------CT--CTCT------ACT-TTCTGAGT-G-AGGG--TA-TTT
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Piliocolobus_badius.k141_1987485                           3621 39 -      5908 C---ATA--TTA-A----TCCT-T-----CTT------------------------C------AAT-TGCTGAAT-G-AGGAA-TA-ATT
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       4239 39 -     17985 C---ATA--TTA-A----TCCC-T-----CTT------------------------C------GAT-TGCTGAAT-G-AGGAA-TA-ATT
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            3606 39 +      7694 C---ATA--TTA-A----TCCT-T-----CTT------------------------C------GAT-TGCTGAAT-G-AGGAA-TA-ATT
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26742090 39 +  26888534 t---ata--tta-a----tccT-T-----CTT------------------------C------AAT-TGCTGAAT-G-AGGAA-TA-ATT
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pithecia_albicans.k141_991845                             45038 42 -     61926 C---ACA--TTA-A----TCCT-T--TTTCTC------------------------T------AAT-TGCTGAAT-G-AGGAG-TA-ATT
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        26421 42 +     78826 C---ACA--TTA-A----TCCT-T--TTTCTC------------------------T------AAT-TGCTGAAT-G-AGGAG-TA-ATT
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                             10469 42 -     15800 C---ACA--TTA-A----TCCT-T--TTTCTC------------------------T------AAT-TGCTGAAT-G-AGGAG-TA-ATT
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        13668 42 -     16101 C---ACA--TTA-A----TCCT-T--TTTCTC------------------------T------AAT-TGCTGAAT-G-AGGAG-TA-ATT
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          6897 42 +      9673 C---ACA--TTA-A----TCCT-T--TTTCTC------------------------T------AAT-TGCTGAAT-G-AGGAG-TA-ATT
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13475897 42 -  19735023 C---ACA--TTA-A----TCCT-T--TTTCTC------------------------T------AAT-TGCTGAAT-G-AGGAG-TA-ATT
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           14800 42 -     31692 C---ACA--TTA-A----TCCT-T--TTTCTC------------------------T------AAT-TGCTGAAT-G-AGGAG-TA-ATT
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           6969 42 +     21690 C---CTG--TTA-A----GCCT-T-------TTAT--------------CT--C--T------ACT-TTCCGAGT-G-AGGG--TA-TTT
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       24131 42 +     44506 C---ACA--TTA-A----TCCT-T--TTTCTC------------------------T------AAT-TGCTGAAT-G-AGGAA-TA-ATT
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        24344 42 +     67491 C---ACA--TTA-A----TCCT-T--TTTCTC------------------------T------AAT-TGCTGAAT-G-AGGAA-TA-ATT
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      14583 42 -     98129 C---ACA--TTA-A----TCCT-T--TTTCTC------------------------T------AAT-TGCTGAAT-G-AGGAA-TA-ATT
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     24183 42 +    147771 C---ACA--TTA-A----TCCT-T--TTTCTC------------------------T------AAT-TGCTGAAT-G-AGGAA-TA-ATT
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                          819 42 -     43940 C---ACA--TTA-A----TCCT-T--TTTCTC------------------------T------AAT-TGCTGAAT-G-AGGAA-TA-ATT
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          4902 42 -     55515 C---ACA--TTA-A----TCCT-T--TTTCTC------------------------T------AAT-TGCTGAAT-G-AGGAA-TA-ATT
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         24256 42 +    152463 C---ACA--TTA-A----TCCT-T--TTTCTC------------------------T------AAT-TGCTGAAT-G-AGGAA-TA-ATT
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       1973 42 -    119457 C---ACA--TTA-A----TCCT-T--TTTCTC------------------------T------AAT-TGCTGAAT-G-AGGAA-TA-ATT
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         13979 42 +    134592 C---ACA--TTA-A----TCCT-T--TTTCTC------------------------T------AAT-TGCTGAAT-G-AGGAA-TA-ATT
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          24566 42 -     75465 C---ACA--TTA-A----TCCT-T--TTTCTC------------------------T------AAT-TGCTGAAT-G-AGGAA-TA-ATT
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              188726 39 -    373494 C---ATA--TTA-A----TCCT-T-----CTT------------------------T------AAT-TGCTGAAT-G-AGGAA-TA-ATT
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19809373 39 +  19899266 C---ATA--TTA-A----TCCT-T-----CTT------------------------T------AAT-TGCTGAAT-G-AGGAA-TA-ATT
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               7368 39 -     15069 C---ATA--TTA-A----TTCT-T-----CTT------------------------C------GAT-TGCTGAAT-G-AGGAA-TA-ATT
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              7483 39 +     14865 C---ATA--TTA-A----TTCT-T-----CTT------------------------C------GAT-TGCTGAAT-G-AGGAA-TA-ATT
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6849651 37 +  12164890 C---ATG--TTA-A----GCTT-T-------T------------------------T------TAC-CTCCAAAT-G-AGGAA-TA-ATG
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     19825 37 -     30946 n---nnn--nnn-n----nnnn-n-------n------------------------n------nnn-nnnnnnnn-n-nnnnn-nn-nnn
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         4730 36 +     11805 C---CTG--TTA-A----GC-T-T-------T------------------------T------TAC-CTCCAAAT-G-AGGAA-TA-ATG
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           44078 36 +     52369 C---CTG--TTA-A----GC-T-T-------T------------------------T------TAC-CTCCAAAT-G-AGGAA-TA-ATG
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         36465 36 -     44753 C---CTG--TTA-A----GC-T-T-------T------------------------T------TAC-CTCCAAAT-G-AGGAA-TA-ATG
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            18388 36 +     27322 C---TTG--TTA-A----GC-T-T-------T------------------------T------TAC-CTCCAAAT-G-AGGAA-TA-ATG
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       18022 36 -     53241 C---CTG--TTT-A----GC-T-T-------T------------------------T------TAC-CTCCAAAT-G-AGGAA-TA-ATG
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         40286 36 -     48185 C---CTG--TTT-A----GC-T-T-------T------------------------T------TAC-CTCCAAAT-G-AGGAA-TA-ATG
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           36626 30 +     77221 -----------------------T-------TT---------------AC---CTAT------AAT-GGCTGAAT-A-GAGA--TA-TTT
i Psammomys_obesus.NESX01026517.1                       I 2 C 0
s Pteronotus_parnellii.KE867983.1                            5224 43 -     27784 C--C-TG--GTA-A----GCCT-T-------TTAAT-------------CT--C--T------AAT-TTCTGAGT-G-AAAT--TT-GCT
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        247860 42 -    344369 C---CAG--TTA-A----GCTT-T-------T--------------CG--TATC--T------AAT-TGCTGGGT-G-AGGA--TA-TTT
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13247145 43 -  17261082 C---CTG--GTA-A----GCCT-T----T--TTAT--------------CT--C--T------AAT-ATCTGAGT-G-ATAA--TA-TTT
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             605095 43 -   3946241 C---CTG--GTA-A----GCCT-T----T--TTAT--------------CT--C--T------AAT-ATCTGAGT-G-ATAA--TA-TTT
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131535504 42 - 161321710 C---CAG--TTA-A----ACTT-T-------T-----------------CAT-ATAT------AAT-TAGTGAGT-G-AGGA--TA-TTT
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             31472 39 +     56732 C---ACA--TTA-A----TTCT-T-----CTT------------------------C------GAT-TGCTGAAT-G-AGGAA-TA-ATT
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6807966 43 +   6970761 C---ATA--TTA-ATTCTTTCT-T-----CTT------------------------C------GAT-TGCTGAAT-G-AGGAA-TA-ATT
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             7359 39 +     18040 C---ATA--TTA-A----TTCT-T-----CTT------------------------C------GAT-TGCTGAAT-G-AGGAA-TA-ATT
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                17229 42 +     68503 C---CTG--GTA-A----GTCT-T-------TT----------------CT--CTCT------ACT-TTCTGAGT-G-AGGG--TA-TTT
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1789024 42 +   2252614 C---CTG--GTA-A----GCCT-T-------TTAT--------------CT--C--T------AAT-TTTTAAGT-G-AGGT--TA-TTT
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                            1755 39 -     17045 C---ATA--TTA-A----TTCT-T-----CTT------------------------C------GAT-TGCTGAAT-G-AGGAA-TA-ATT
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206379243 39 - 206558726 C---ATA--TTA-A----TTCT-T-----CTT------------------------C------GAT-TGCTGAAT-G-AGGAA-TA-ATT
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44858145 39 -  45163003 C---ATA--TTA-A----TTCT-T-----CTT------------------------C------GAT-TGCTGAAT-G-AGGAA-TA-ATT
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                20482 42 +    109198 C---CTG--GTA-A----GCCT-T-------TTAT--------------CT--C--T------AAT-TTCTGAGT-G-ATAA--TA-TTT
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       9395 43 +     12214 C---CTG--GTA-A----GTTTTT-------TT----------------CT--CTCT------ACA-TTCTGAGT-G-AGGG--TA-TGT
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15673985 42 -  43202129 C---ATA--TTA-A----TCCT-T--TTTCTC------------------------T------AAT-TGCTGAAT-G-AGGAA-TA-ATT
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        5898 42 +     34089 C---ATA--TTA-A----TCCT-T--TTTCTC------------------------G------AAT-TGCTGAAT-G-AGGAA-TA-ATT
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              5840 42 -     60842 C---ATA--TTA-A----TCCT-T--TTTCTC------------------------G------AAT-TGCTGAAT-G-AGGAA-TA-ATT
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              5933 42 +     67014 C---ATA--TTA-A----TCCT-T--TTTCTC------------------------G------AAT-TGCTGAAT-G-AGGAA-TA-ATT
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              5911 42 +     60816 C---ATA--TTA-A----TCCT-T--TTTCTC------------------------G------AAT-TGCTGAAT-G-AGGAA-TA-ATT
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 5848 42 -     76454 C---ATA--TTA-A----TCCT-T--TTTCTC------------------------G------AAT-TGCTGAAT-G-AGGAA-TA-ATT
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17342580 42 -  30362882 C---ATA--TTA-A----TCCT-T--TTTCTC------------------------T------AAT-TGCTGAAT-A-AGGAA-TA-ATT
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         21941 42 -     62485 C---ATA--TTA-A----TCCT-T--TTTCTC------------------------T------AAT-TGCTGAAT-A-AGGAA-TA-ATT
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   37869 29 -    114521 -------------------------------TTAT--------------CT--C--T------GAT-TTCTCCAT-G-AGTG--TA-TTT
i Scalopus_aquaticus.ScaAqu_scaffold_9300               I 12 C 0
s Semnopithecus_entellus.k141_1572367                        4975 39 +     15331 C---ATA--TTA-A----TTCT-T-----CTT------------------------C------GAT-TGCTGAAT-G-AGGAA-TA-ATT
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      10350 39 +     20762 C---ATA--TTA-A----TTCT-T-----CTT------------------------C------GAT-TGCTGAAT-G-AGGAA-TA-ATT
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         120355 39 +    130994 C---ATA--TTA-A----TTCT-T-----CTT------------------------C------GAT-TGCTGAAT-G-AGGAA-TA-ATT
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           39134 39 +     46263 C---ATA--TTA-A----TTCT-T-----CTT------------------------C------GAT-TGCTGAAT-G-AGGAA-TA-ATT
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     32279 39 +     42640 C---ATA--TTA-A----TTCT-T-----CTT------------------------C------GAT-TGCTGAAT-G-AGGAA-TA-ATT
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        15301 39 +     30600 C---ATA--TTA-A----TTCT-T-----CTT------------------------C------GAT-TGCTGAAT-G-AGGAA-TA-ATT
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  101577 41 -    120886 A---ATG--CTA-A----G-CA-T-------TT---------------AC---CTCT------AGT-TACTGAAT-G-GGGA--TA-TTT
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            20043 42 +    739146 C---CTG--CTA-A----GCCA-T-------TTAT--------------CT--C--T------AAT-TGCTGAGT-G-AGAG--TA-CTT
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17767614 31 -  27805282 G----TG--CTA-A----GTCT-T-------TTAT--------------CT--C--T------AAT-TGCTGAGT---------------
i Sorex_araneus.JH798170.1                              C 0 I 9
s Spermophilus_dauricus.KZ294190.1                        2241081 42 +   2842873 c---ata--at-aa----attt-t-------t------------------tatctcT------AAC-CACTGAAT-G-GACA--TA-TTT
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             236237 25 -    276980 C---CAA--TTA-A----ACAT-T-------TT--------------G--TATC--T------AAT-T----------------------
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 I 1976
s Suricata_suricatta.SurSur_flattened_line_20339            28753 42 +     62062 C---CAG--TTA-A----GCCT-T-------T-----------------CAT-ATCC------AAT-TACTGAGT-G-AGGA--TA-TTT
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189273255 39 + 218635234 C---CTG--GTA-A----GCCT-C-------TT--------------AACT--C--T------ACC-TCCTGATT-G-T-----TA-TTT
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        16478 39 -  13920577 C---ATA--TTA-A----TCCT-T-----CTT------------------------T------AAT-TGCTGAAT-G-AGGAA-TA-ATT
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                1453 42 +     20549 C---CTG--GTA-A----GCCT-T-------TTAT--------------CT--C--T------AAT-TTCTGAGT-G-AGGG--TA-ATT
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               15864 47 +     45698 ATGCACATGTTA-T----GCTT-T-------TT---------------AC---CTTT------AAC-TGTTGAAT-G-AAGA--TA-TTT
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      808304 42 +   1148477 C---CTG--TTA-A----GCCT-T-------TTAT--------------CT--C--T------AAT-TGCTGAGG-G-AGGG--TA-TTT
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  59017 42 +     99546 C---CTG--TTA-A----GCCT-T-------TTAT--------------CT--C--T------AAT-TGCTGAGT-G-AGGG--TA-TTT
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194009372 39 - 194193292 C---ATG--TTA-A----TCCT-T-----CTT------------------------T------GAT-TGCTGAAC-G-AGGAA-TA-ATT
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             40263 47 -     47444 t---gag--tta-a----acct-ccggcc--c------------------tatattt------aat-ttcttaat-a-gaGG--TA-TTT
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         I 133 C 0
s Tolypeutes_matacus.TolMat_scaffold_1305119                   74 18 -       594 -------------------------------------------------------------------TATTGACT-G-AGGA--TA-TTT
i Tolypeutes_matacus.TolMat_scaffold_1305119            I 20 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  137200 42 -    259118 C--C-TG--ATA-A----GCCT-T-------TTATTT------------C------T------AAT-TTCTGAGT-G-AGGG--TA-ATT
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        28622 39 +     38948 C---ATA--TTA-A----TTCT-T-----CTT------------------------C------GAT-TGCTGAAT-G-AGGAA-TA-ATT
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   22182 39 -     32910 C---ATA--TTA-A----TTCT-T-----CTT------------------------C------GAT-TGCTGAAT-G-AGGAA-TA-ATT
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      4083 39 -     12939 C---ATA--TTA-A----TTCT-T-----CTT------------------------C------GAT-TGCTGAAT-G-AGGAA-TA-ATT
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       3511 39 -     14244 C---ATA--TTA-A----TTCT-T-----CTT------------------------C------GAT-TGCTGAAT-G-GGGAA-TA-ATT
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           44909 39 -     54611 C---ATA--TTA-A----TTCT-T-----CTT------------------------C------GAT-TGCTGAAT-G-AGGAA-TA-ATT
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        2705 39 -     11566 C---ATA--TTA-A----TTCT-T-----CTT------------------------C------GAT-TGCTGAAT-G-AGGAA-TA-ATT
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     4889 39 -     15592 C---ATA--TTA-A----TTCT-T-----CTT------------------------C------GAT-TGCTGAAT-G-GGGAA-TA-ATT
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          3541 39 +     14371 C---ATA--TTA-A----TTCT-T-----CTT------------------------C------GAT-TGCTGAAT-G-GGGAA-TA-ATT
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   1827 39 +     12481 C---ATA--TTA-A----TTCT-T-----CTT------------------------C------GAT-TGCTGAAT-G-GGGAA-TA-ATT
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        1808 39 -     24393 C---ATA--TTA-A----TTCT-T-----CTT------------------------C------GAT-TGCTGAAT-G-AGGAA-TA-ATT
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       6952 39 -     28054 C---ATA--TTA-A----TTCT-T-----CTT------------------------C------GAT-TGCTGAAT-G-AGGAA-TA-ATT
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44661736 39 -  44834318 C---ATA--TTA-A----TTCT-T-----CTT------------------------C------GAT-TGCTGAAT-G-AGGAA-TA-ATT
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       4053 39 +     13828 C---ATA--TTA-A----TTCT-T-----CTT------------------------C------GAT-TGCTGAAT-G-AGGAA-TA-ATT
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   6589 42 +     90398 C---CTG--GTA-A----GTCT-T-------TTATAT------------C------T------ACT-TTCTGAAT-G-ACAG--TA-TTT
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16087272 51 +  31416278 t---ATG--TTA-G----Gcct-c-------t---------tcttttttctgtcttt------aat-tgTTAAAG-G-AGGA--TA-TCT
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2794625 42 -   3938065 C---ATG--TTA-A----GCTT-T-------T------------------------TATGTTGAAT-TGCTTAAT-A-GAAG--TA-TTT
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    6729 42 +     13056 C---ATG--TTA-A----GCTT-T-------T------------------------TATGTTGAAT-TGCTTAAT-A-GAAG--TA-TTT
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69314766 42 -  96451834 C---CTG--TTA-A----GCCT-T-------TTAT--------------CT--C--T------ACT-TTCTGAGT-G-AGGG--TA-TTT
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   8426 41 +     10241 C---CTC--TTA-A----ACCT-C-------TTAT--------------CT--C--T------AAT-T-CTGAGT-G-AGTG--TA-TTT
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6515982 42 +  28682327 C---CAA--TTA-A----GCTT-T-------T-----------------CAT-ATCT------AAT-TGCTGAGT-G-AGGA--TA-TTT
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  6286 37 -     20643 C---ATG--TTA-A----GCTT-T-------T------------------------T------TAC-CTCCAAAT-G-AGGAA-TA-ATG
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             25821 37 -     33872 C---ATG--TTA-A----GCTT-T-------T------------------------T------TAC-CTCCAAAT-G-AGGAA-TA-ATG
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1525795 42 -   2331223 C---CTG--GTA-A----GCCT-A-------TT---------------AC---CTCC------ACT-TTCTGAGT-G-AGGG--TA-TTT
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                139723 42 -    281493 C---CAG--TTA-A----GCTT-T-------T-----------------CAT-ATCT------AAT-TGCTGAGC-G-AGGA--TA-TTC
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       128039 38 -    134049 ---------AT-AA----ATCT-T-------TTAT--------------CT--C--T------AAC-CATTGAAT-A-GAGA--TA-TTT
i Xerus_inauris.XerIna_scaffold_7898                    I 5 I 16
s Zalophus_californianus.ZalCal_flattened_line_4097        215461 42 -    227762 C---CAA--TTA-A----GCTT-T-------T-----------------CAT-ATCT------AAT-TGTTGAAT-G-AGGA--TA-TTT
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     17583 51 -     20485 A---ATC--CTT-G----GATT-T-------TCTTCCGT--------GG-TTTCTAC------AAT-TACTACAA-T-GAGT--TA-TTA
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           8264 42 -      8775 C---CTG--TTA-A----GCCT-T-------TTAT--------------CT--C--T------ACT-TTCTGAGC-G-AGGG--TA-TTT
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Ochotona_princeps.JH802095.1                            4996729 2205 -  23139505 I
e Perognathus_longimembris.PerPac_flattened_line_19359        892 695 +     49596 I
e Procavia_capensis.ProCapCap_scaffold_149274                2467 1156 -      9567 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Megaderma_lyra.MegLyr_scaffold_3562                       64783 239 -    234502 I
e Heterohyrax_brucei.HetBruBak_scaffold_25354               61360 1157 +     73687 I
e Echinops_telfairi.JH980316.1                           22999931  2 -  44670279 I
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1008 325 -      5782 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19677 266 -    119109 I
e Tarsius_wallacei.k141_48636                               60532 3805 +     65473 I
e Tarsius_lariang.k141_609102                               27216 3812 +     42269 I
e Rattus_norvegicus.chr11                                13915860 1475 +  90463843 I
e Nannospalax_galili.KL201303.1                            119252 614 +    362372 I
e Mus_spretus.CM004110.1                                 74333573 2703 +  97876770 I
e Mus_pahari.LT608305.1                                  67557037 2889 +  89017189 I
e Mus_musculus.chr16                                     75490838 2711 +  98207768 I
e Mus_caroli.LT608236.1                                  70767758 3738 +  92629107 I
e Dolichotis_patagonum.DolPat_scaffold_14102                36772 276 -     73477 I
e Dasyprocta_punctata.DasPun_flattened_line_634             59553 276 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                18462 277 +     26546 I
e Ctenodactylus_gundi.CteGun_scaffold_447                  209506 3013 -    956709 I
e Cephalopachus_bancanus.k141_702587                         8788 3391 +     21754 I
e Cavia_tschudii.CavTsc_scaffold_488                       177453 271 +    436027 I
e Cavia_porcellus.DS562889.1                             15799262 290 -  24440124 I
e Cavia_aperea.AVPZ01000278.1                            15787326 288 -  24422027 I
e Carlito_syrichta.NW_007248099.1                          309764 3411 +    345090 I
e Pan_paniscus.CM003386.1                               127575888 480 - 205426864 I
e Pan_troglodytes.CM009241.2                            120153042 480 - 196562556 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               15166 32 +    209709 GTTCA-CTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAAAACTT----AAT
s Acinonyx_jubatus.LLWD01000356.1                         2035186 32 +   3721120 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------G----------------TCTCAAACACT----AGT
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    115042 32 -    189883 ATTTA-TGGG-----TT---CT----------T------------A-A-A-----------A----------------TCCTAATACCT----GTT
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10658753 32 +  23371972 GTTCA-ATGA-----CC---CT----------C------------G-A-A-----------A----------------TCTCAAACACT----AGT
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7095887 33 -  16596857 GTCCAAATGA-----CC---CT----------C------------C-A-A-----------A----------------TCTCTAATACT----AGT
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   19440 32 -     22067 ATTCA-TGGG-----AC---CT----------T------------A-A-A-----------T----------------TCCCAAATCCT----ACG
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   2893 32 -     60446 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAACACTT----AGT
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         3610 32 -     29318 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAACACTT----AGT
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         2546 32 +     38766 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAACACTT----AGT
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          3504 32 -     80423 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAACACTT----AGT
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            11494 32 -     18050 GTTCC-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCCTAAACTT----CGT
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_1710068                               1210 32 +      1555 GTTCC-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCCTAAACTT----CGT
i Alouatta_caraya.k141_1710068                          C 0 C 0
s Alouatta_discolor.k141_811576                             12167 32 -     21359 GTTCC-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCCTAAACTT----CGT
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                1790 32 +      2129 GTTCC-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCCTAAACTT----AGT
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_2177643                          1167 32 -      1868 GTTCC-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCCTAAACTT----CGT
i Alouatta_macconnelli.k141_2177643                     C 0 C 0
s Alouatta_nigerrima.k141_3537692                            1216 32 +      1660 GTTCC-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCCTAAACTT----AGT
i Alouatta_nigerrima.k141_3537692                       C 0 C 0
s Alouatta_palliata.k141_2764429                             1136 32 -      1480 GTTCC-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCCTAAACTT----AGT
i Alouatta_palliata.k141_2764429                        C 0 C 0
s Alouatta_puruensis.k141_131505                              423 32 +      4855 GTTCC-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCCTAAACTT----AGT
i Alouatta_puruensis.k141_131505                        C 0 C 0
s Alouatta_seniculus.k141_1531728                            1351 32 -      1692 GTTCC-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCCTAAACTT----AGT
i Alouatta_seniculus.k141_1531728                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3521610 32 +   4113121 GTTCA-CTGA-----CC---TC----------A------------G-A-A-----------A----------------TCTCAAACTCT----AGT
i Ammotragus_lervia.NIVO01013474.1                      I 20 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      391699 41 -    631301 GTTCA--CAA-----CC---CTTGGTAAGCTTT------------G-A-A-----------A----------------TCTCAAACCCT----AGT
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            32194 32 +     33004 GTTCA-CTGA-----CC---TC----------A------------G-A-A-----------A----------------TCTCAAACCCT----AGT
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 63836 32 +     78111 GTTCC-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCCCAAACTT----AGT
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            6779 32 +     22701 GTTCC-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCTCCAAACTT----AGT
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5750736 32 +   9889416 GTTCC-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCCCAAACTT----AGT
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             7325 32 -    104377 GTTCC-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCCCAAACTT----AGT
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               7327 32 +     23246 GTTCC-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCCCAAACTT----AGT
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_231055                     1216 16 -      2492 GTTCA-ATGA-----CC---TT----------T------------A-A------------------------------------------------
i Aplodontia_rufa.AprRuf_scaffold_231055                C 0 I 15
s Arctocebus_calabarensis.k141_587554                        2126 32 +      9265 GCTTA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAAACTCT----AGT
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                10117 41 -     29036 GTTCA--CAA-----CC---CTTGGTAAACTTT------------G-A-A-----------A----------------TCTCAAACCCT----AAT
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9540603 32 +  39197703 GTTCC-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCCCAAACTT----AGT
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             61876 32 +     85812 GTTCC-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCCCAAACTT----AGT
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                12889 32 +     89302 GTTCC-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCCCAAACTT----AGT
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             17390 32 -     58268 GTTCC-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCCCAAACTT----AGT
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             65384 32 +    119057 GTTCC-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCCCAAACTT----AGT
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               7353 32 -     25888 GTTCC-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCCCAAACTT----AGT
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 7858 32 -     16375 GCTCA-TTGA-----TC---CT----------T------------A-A-A-----------A----------------TCCCAAACCCT----AGT
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               1474 32 +      6337 GCTCA-TTGA-----TC---CT----------T------------A-A-A-----------A----------------TCCCAAACCCT----AGT
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26381581 32 +  51448160 GCTCA-TTGA-----GC---TT----------A------------G-A-A-----------A----------------TCTCAAACCCT----CGT
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        6754 32 -     13118 GCTCA-TTGA-----GC---TT----------A------------G-A-A-----------A----------------TCTCAAACCCT----CGT
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   44715 32 -     72089 GTTCA-CTGA-----CC---TC----------A------------G-A-A-----------A----------------TCTCAACCCCT----AGT
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6561337 32 +   6870073 GTTCA-CTGA-----CC---TC----------G------------G-A-A-----------A----------------TCTCAAACCCT----AGT
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138141459 32 - 161108492 GTTCA-CTGA-----CC---TC----------A------------G-A-A-----------A----------------TCTCAAACCCT----AGT
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     573989 32 -    998990 GTTCA-CTGA-----CC---TC----------G------------G-A-A-----------A----------------TCTCAAACCCT----AGT
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136297192 32 - 158972876 GTTCA-CTGA-----CC---TC----------A------------G-A-A-----------A----------------TCTCAAACCCT----AGT
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1234273 32 -   1914593 GTTCA-CTGA-----CC---TC----------A------------G-A-A-----------A----------------TCTCAAACCCT----AGT
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               115237 35 -    171031 GTTCC-TTGA-----CT---CT----------T------------A-A-A-----------A----------------TGCCCGAACTTAGTCAG-
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 14266 35 +    125063 GTTCC-TTGA-----CT---CT----------T------------A-A-A-----------A----------------TGCCCAAACTTAGTCAG-
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                16309 35 -    216513 GTTCC-TTGA-----CT---CT----------T------------A-A-A-----------A----------------TGCCCGAACTTAGTCAG-
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        8852 35 -    134917 GTTCC-TTGA-----CT---CT----------T------------A-A-A-----------A----------------TGCCCGAACTTAGTCAG-
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3220732 32 -   8989139 GTTCA-CTGA-----CC---TT----------A------------G-A-A-----------A----------------TCTCCAACCCT----AGT
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           398433 32 -  15254737 GTTCA-CTGA-----CC---TT----------A------------G-A-A-----------A----------------TCTCCAACCCT----AGT
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2974169 32 +   6889770 GTTCA-CTGA-----CC---TT----------A------------G-A-A-----------A----------------TCTCCAACCCT----AGT
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11520928 32 +  39901454 ATTCA-TTGA-----CC---CT----------T------------G-A-A-----------A----------------TCTCAAACACT----AGT
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   15953 32 +     87036 ATTCA-TTGA-----CC---CT----------T------------G-A-A-----------A----------------TCTCAAACACT----AGT
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11267597 32 -  35597290 ATTCA-TTGA-----CC---CT----------T------------G-A-A-----------A----------------TCTCAAACACT----AGT
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11090130 32 +  39895921 ATTCA-TTGA-----CC---CT----------T------------G-A-A-----------A----------------TCTCAAACACT----AGT
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16457143 32 -  44759192 ATTCA-TTGA-----CC---CT----------T------------G-A-A-----------A----------------TCTCAAACACT----AGT
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21326671 32 + 157394656 GTTCA-CTGA-----CC---TC----------A------------G-A-A-----------A----------------TCTCAAACTCT----AGT
i Capra_aegagrus.CM003214.1                             I 10 C 0
s Capra_hircus.CM004562.1                               135707892 28 - 157403528 ----A-CTGA-----CC---TC----------A------------G-A-A-----------A----------------TCTCAAACTCT----AGT
i Capra_hircus.CM004562.1                               I 3 C 0
s Capromys_pilorides.CapPil_scaffold_790727                     0 31 -      1550 --TCA-TGGA-----TC---TT----------T------------A-AAA-----------A----------------TCCCAAATCCT----AGT
i Capromys_pilorides.CapPil_scaffold_790727             N 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               60904 41 +     67245 GTTCA--CGA-----CC---CTTGGTAAACTTT------------G-A-A-----------A----------------TCTCAAACCCT----AGT
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   32297 32 +     33760 GCTCA-TGGA-----CC---CT----------T------------A-A-A-----------A----------------TTCCAACTCCT----AGT
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   160336 32 -    276539 GTTTA-CAGA-----TC---TT----------A------------G-A-A-----------A----------------TCTCTAACCCT----AGT
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18892077 32 -  29618158 GTTCC-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCCCAAACTT----AAT
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 9621 32 -     26817 GTTCC-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCCCAAACTT----AAT
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                13864 32 +     25043 GTTCC-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCCCAAACTT----AAT
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4365106 32 +   7569818 GTTCA-TTGA-----CC---CT----------T------------G-A-C-----------A----------------TTTCAAATCCT----AGT
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         4863 32 -      9338 GTTCA-TTGA-----CC---CT----------T------------G-A-C-----------A----------------TTTCAAATCCT----AGT
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6556840 32 +   6739814 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCGAACACGT----AGT
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      28314 32 +     60454 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCGAACACGT----AGT
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          3521 32 -     21101 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCGAACACGT----AGT
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         60831 32 -    107033 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCGAACACGT----AGT
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        3710 32 -     17608 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAACACTT----AGT
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                           869 32 +     45019 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAACACTT----AGT
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                            953 32 +     15177 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAACACTT----AGT
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          3753 32 +     16677 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAACACTT----AGT
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           25923 32 +     35983 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAACACTT----AGT
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11992451 32 +  12117833 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAACACTT----AGT
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46479209 32 +  46592721 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAACACTT----AGT
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      42763 32 -     45581 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAACACTT----AGT
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       3765 32 +     35577 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAACACTT----AGT
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        3538 32 -     25661 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAACACTT----AGT
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        3517 32 -     17744 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAACACTT----AGT
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        23123 32 +     37128 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAACACTT----AGT
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           3937 38 -      6963 GTGCA-CTGA-----CA---TT----------T------------G-A-A-----------ATCATGCAT----CTAGTTCCAAAT----------
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           60130 32 -     68416 GCTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCACAAACCCT----AGT
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            9182 32 +     13308 GCTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCACAAACCCT----AGT
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             6894 32 -     18223 GTTCC-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TACCCAAACTT----AGT
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             23912 32 +     25473 GTTCC-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TACCCAAACTT----AGT
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           42952 32 +     57117 GTTCC-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TACCCAAACTT----AGT
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          47631 32 +     54541 GTTCC-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TACCCAAACTT----AGT
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15962908 32 +  43084221 GTTCA-TCGA-----TC---CT----------T------------C-A-A-----------A----------------TCCCAAAACCT----AGT
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         72438 31 +    196370 GTTCC-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TGCCCAAACTT----AG-
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          16618 31 +     40510 GTTCC-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TGCCCAAACTT----AG-
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15141120 32 -  15256731 GTTTA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAACACTT----AGT
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      35729 32 -     53260 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAACACTT----AGC
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101146288 32 + 101219884 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAACACTT----AGT
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                17700 44 -     21363 GTTCA-TTGA-----CT---CT----------T------------G-A-A-----------ATCATGCAT----CTAGTTCCAAATCCT----AGT
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           763005 44 +    964067 GTTCA-TTGA-----CT---CT----------T------------G-A-A-----------ATCATGCAT----CTAGTTCCAAATCCT----AGT
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10888277 32 +  10971483 GTTCA-TTGA-----CC---TT----------T------------A-A-A-----------A----------------TCCTAAACCTT----AGT
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147666205 32 + 156195979 GTTCA-TTGA-----CC---TT----------T------------A-A-A-----------A----------------TCCTAAACCTT----AGT
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            18188 32 +     23629 GTTCA-TTGA-----CC---TT----------T------------A-A-A-----------A----------------TCCTAAACCTT----AGT
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60620758 37 +  78930452 ATCCT-CTTGAAATCTC---CT----------T------------G-A-A-----------A----------------TCTCAAGCCTC----CAT
i Condylura_cristata.JH655880.1                         C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 279556 32 -    399297 ATTTA-TGGG-----TC---AT----------T------------A-A-A-----------A----------------TCCAAGTATTT----GGA
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53031660 32 +  72327488 ATTTA-TGGG-----TT---CT----------T------------A-A-A-----------A----------------TCCCAATACCT----GGT
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_848148              739 32 +      1327 GCTCA-CTGA-----CC---CT----------T------------G-A-C-----------A----------------TCTCCTACCTT----AGT
i Crocidura_indochinensis.CroInd_scaffold_848148        C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            53242 33 -     70449 GCTCA-TTTA-----CC---CT----------T------------A-AAA-----------A----------------TCTCAAACACT----AGT
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 32264 33 -     67205 ATTCA-TTGA-----TC---CT----------T------------A-AAA-----------A----------------TTCCAAATCCT----AGC
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          184810 38 -   6883506 GTTTA-CTGA-----CT---TT----------T------------G-A-A-----------ATCCTACAT----CTAGTTCCAAAT----------
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16845995 32 +  31942871 GCTCA-CTTA-----CC---CT----------T------------A-A-A-----------A----------------TCCCAAACCCT----AGT
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80038204 32 -  96802777 GTTCA-TTGA-----GC---TT----------A------------G-A-A-----------A----------------TCTCAAACCCT----TGT
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18700195 41 -  18957592 GTTCA--CGA-----CC---CTTGGTAAGCTTT------------G-A-A-----------A----------------TCTCAAACCCT----AGT
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 323758 32 +    993696 GTTCA-TTGA-----CC---CT----------T------------G-A-C-----------A----------------TTTCAAATCCT----AGT
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   4395 32 +    151128 GTTCA-TTGA-----CC---CT----------T------------G-A-C-----------A----------------TTTCAAATCCT----AGT
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   158107 32 +    228994 GTTCA-TTGA-----TC---CT----------T------------A-A-A-----------A----------------TCCCAAAACCT----AGT
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3658277 30 +   4240102 GGTCA-TGTG-----CC---TT----------A------------A-A-A-----------A----------------TCCCAATTTGT----A--
i Dipodomys_ordii.KN672545.1                            C 0 I 229
s Dipodomys_stephensi.DipSte_scaffold_84338                   650 30 -     11986 GGTCA-TGTG-----TC---TT----------A------------A-A-A-----------A----------------TCCCAATTTGT----A--
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 I 213
s Eidolon_helvum.KE772537.1                                 13467 42 +     24177 tttca-cTGA-----CC---CT----------TGATG-A-CCTTTG-A-A-----------T----------------TCTCAAACCCT----AGT
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1492940 32 +   1727528 GTTCA-CTGA-----CT---TC----------A------------G-A-A-----------A----------------TCTCAAACCCT----AGT
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7829909 52 +  15467074 GTTTG-TTGA-----CATATCT----------C-A----------A-A-T-----------GTCAAATATTGGTCTCTTCTCAAATGTT----AGT
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        240636 32 -    369425 ATTTA-CCAG-----TC---CT----------T------------A-A-A-----------A----------------TCCCAGTACCT----GGT
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01204657.1                             70 32 +      1708 ATTTA-CCAG-----TC---CT----------T------------A-A-A-----------A----------------TCCCAATACCT----GAT
i Ellobius_talpinus.LOJH01204657.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85873326 32 +  99434291 GTCCA-ATGA-----CC---CT----------C------------A-A-A-----------A----------------TCTCAAACACT----AGT
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4708157 42 +   6522550 GTTCC-TTGA-----CC---CT----------TGATG-A-ACTTTG-A-A-----------A----------------TCtcaaaccct----agc
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5854396 32 -   7175178 GTTCA-CTGA-----CC---CC----------C------------G-A-C-----------A----------------TTTCAAATCCA----ACT
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13352896 32 +  41866177 GTTCA-CTGA-----CC---CC----------C------------G-A-C-----------A----------------TTTCAAATCCT----ACT
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          14386 32 +     92910 GTTCA-CTGA-----CC---CC----------C------------G-A-C-----------A----------------TTTCAAATCCT----ACT
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11641670 32 +  16010500 GTCTA-CTGG-----TC---TT----------T------------G-A-A-----------A----------------TCTCAAAGCAT----AGT
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48778299 32 -  48907691 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAACACTT----AGT
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          316422 32 +    330699 GTTCA-TTGA-----GC---TT----------A------------G-A-A-----------A----------------TCTCAAACCCT----CGT
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             62876 32 +     89355 GTTCA-TTGA-----GC---TT----------A------------G-A-A-----------A----------------TCTCAAACCCT----TGT
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              6169 32 +     13586 GCTCA-TTGA-----CT---CT----------T------------A-A-A-----------A----------------TCCCAAACCCT----AGT
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               6101 32 -      6809 GCTCA-TTGA-----CT---CT----------T------------A-A-A-----------A----------------TCCCAAACCCT----AGT
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            12575 32 +     36558 GCTCA-TTGA-----CT---CT----------T------------A-A-A-----------A----------------TCCCAAACCCT----AGT
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             8892 32 +     60246 GCTCA-TTGA-----CT---CT----------C------------A-A-A-----------A----------------TCCCAAACCCT----AGT
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                12374 32 +    109717 GCTCA-TTGA-----CT---CT----------T------------A-A-A-----------A----------------TCCCAAACCCT----AGT
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                  359 32 -     19505 GCTCA-TTGA-----CT---CT----------T------------A-A-A-----------A----------------TCCCAAACCCT----AGT
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                17034 32 +     27497 GCTCA-TTGA-----CT---CT----------T------------A-A-A-----------A----------------TCCCAAACCCT----AGT
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           19490 32 +     26808 GCTCA-TTGA-----CT---CT----------T------------A-A-A-----------A----------------TCCCAAACCCT----AGT
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                34228 32 +     46535 GCTCA-TTGA-----CT---CT----------T------------A-A-A-----------A----------------TCCCAAACCCT----AGT
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              16954 32 -     29447 GCTCA-TTGA-----CT---CT----------T------------A-A-A-----------A----------------TCCCAAACCCT----AGT
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129894158 32 - 159252932 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------G----------------TCTCAAACACT----AGT
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129281242 32 - 158578461 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------G----------------TCTCAAACACT----AGT
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 22382 30 +     52776 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------G------------------TCAAACACT----AGT
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13892570 32 -  19261668 GTTCA-TTGA-----TT---CT----------T------------A-A-A-----------A----------------CCCCAAATCCT----AGT
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     212032 32 -    847004 GCTTA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAAACTCT----AGT
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           14403 32 -     43889 GCTTA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAAACTCT----AGT
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          11472 31 +     27357 GCTTA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TC-TAAACTCT----AGT
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    182736 32 -    189561 GTTCA-CTGA-----CC---TC----------A------------G-A-A-----------A----------------TCTCAAACCCT----AGT
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           14976 32 -     18683 GTTCA-TTGA-----CC---CT----------C------------A-A-G-----------A----------------TCCCAAACTCT----AGT
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               6880 32 -     14630 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAAAACTT----AAT
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119653980 32 - 195582420 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAAAACTT----AAT
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   78388 32 +    118900 TCTCA-TTGA-----TC---CT----------C------------A-G-G-----------A----------------TTCCAAACTCT----AGT
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         2959 32 +     10286 GCGCA-TTGA-----CT---CT----------T------------A-A-A-----------A----------------TCCCAAACCAT----AGT
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             1439 32 -     11661 GCGCA-TTGA-----CT---CT----------T------------A-A-A-----------A----------------TCCCAAACCCT----AGT
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             6765 32 +     56096 GCGCA-TAGA-----CT---CT----------T------------A-A-A-----------A----------------TCCCAAACCCT----AGT
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        30014 32 -     42470 GCGCA-TTGA-----CT---CT----------T------------A-A-A-----------A----------------TCCCAAACCCT----AGT
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        46642 32 -     54384 GCGCA-TTGA-----CT---CT----------T------------A-A-A-----------A----------------TCCCAAACCCT----AGT
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              18437 33 +     53719 GTTTA-TTTA-----CC---CT----------T------------A-AAA-----------A----------------TCTCAAACACT----AGT
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                28959 32 -     91191 GTTCA-CTGA-----CC---TC----------A------------G-A-A-----------A----------------TCTCAAACCCT----AGT
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 10 C 0
s Heterocephalus_glaber.JH602058.1                        2552289 32 +  31725842 GTTCA-TTGA-----TC---CT----------T------------A-A-A-----------A----------------CCCCAAATCCT----AGT
i Heterocephalus_glaber.JH602058.1                      I 10 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              148295 31 +    277961 -TTCA-TTGA-----CC---TT----------A------------G-A-A-----------A----------------TCTCAAACCCT----AGT
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      279600 41 -    477199 GTTCA--TGA-----CC---TT----------TGATG-A-CCTTTG-A-A-----------A----------------TTTCAAACCCT----AAT
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_104691              8749 41 -      9143 GTTCA--TGA-----CC---TT----------TGATG-A-CCTTTG-A-A-----------A----------------TTTCAAACCCT----ATT
i Hipposideros_galeritus.HipGal_scaffold_104691         I 107 I 280
s Hoolock_leuconedys.ctg79                                      6570 32 -   7690867 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------CCCTAAAACTT----AAT
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 18508 32 -     67322 GTGCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCTCAAACACT----ATT
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hylobates_abbotti.k141_164775                              1353 32 -      2073 GTTCA-TTGA-----CC---CT----------T------------C-A-A-----------A----------------CCCTAAAACTT----AAT
i Hylobates_abbotti.k141_164775                         C 0 C 0
s Hylobates_agilis.k141_1621614                              1380 32 -      1673 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------CCCTAAAACTT----AAT
i Hylobates_agilis.k141_1621614                         I 358 I 41
s Hylobates_klossii.k141_183401                               906 32 -      1272 GTTCA-TTGA-----CC---CT----------T------------C-A-A-----------A----------------CCCTAAAACTT----AAT
i Hylobates_klossii.k141_183401                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14626258 32 -  25970782 GTTCA-TTGA-----CC---CT----------T------------C-A-A-----------A----------------CCCTAAAACTT----AAT
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_950183                              954 32 +      2027 GTTCA-TTGA-----CC---CT----------T------------C-A-A-----------A----------------CCCTAAAACTT----AAT
i Hylobates_muelleri.k141_950183                        C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             35418 32 -     60944 GTTCA-TTGA-----CC---CT----------T------------C-A-A-----------A----------------CCCTAAAACTT----AAT
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     7361 32 +     22540 GTTTA-TTGA-----TC---CT----------T------------A-A-A-----------A----------------TCCCATATTCT----AGT
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7127206 16 +  13083262 GCTCA-TTGG-----CC---TT----------T------------A-A------------------------------------------------
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 I 15
s Indri_indri.k141_5141390                                   1491 32 -      3181 GCTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCCAAACCCT----AGT
i Indri_indri.k141_5141390                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              10411 32 +     17520 GTTCA-TTGA-----GC---TT----------A------------G-A-A-----------A----------------TCTCAAACCCT----TGT
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH727545.1                                 2387 32 -      4668 ATTCA-TGGG-----AC---CT----------T------------A-A-A-----------T----------------TCCCAAATCCT----AGT
i Jaculus_jaculus.JH727545.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               25014 32 +     37189 ATTCA-GTGA-----GC---TT----------A------------G-A-A-----------A----------------TCTCAAACCCT----CGA
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          51474 32 -    147782 GTTCC-CTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCCCAGACTT----AGT
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    4827 41 +     26176 GTTCC-TTGA-----CC---CT----------TGATG-AACCTT-G-A-A-----------A----------------TCTCAAAC-CT----AGT
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258408317 32 - 285822530 GCTCA-TTGA-----CT---CC----------T------------A-A-A-----------A----------------TCCCAAACCCT----AGT
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        25068 32 +     39228 GCTCT-TTGA-----CT---CT----------T------------A-A-A-----------A----------------TCCCAAATCCT----AGT
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            54454 32 +     63517 GCTCT-TTGA-----CT---CT----------T------------A-A-A-----------A----------------TCCCAAATCCT----AGT
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        79716 32 +    116806 GCTCT-TTGA-----CT---CT----------T------------A-A-A-----------A----------------TCCCAAATCCT----AGT
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     32707 32 -     33031 GCTCT-TTGA-----CT---CT----------G------------A-A-A-----------A----------------TCCCAAATCCT----AGT
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3087189 32 -   3498232 GTTCA-ATGA-----CC---CT----------C------------G-A-A-----------A----------------TCTCAAACACT----AGT
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    14843 32 +     22452 GTTCA-TTGA-----CT---GT----------T------------A-A-A-----------A----------------TTTCAAACCCC----TCT
i Lepus_americanus.LepAme_scaffold_62849                I 332 C 0
s Lipotes_vexillifer.KE558548.1                            137367 32 +   3060487 GTTCA-TTGA-----GC---TT----------A------------G-A-A-----------A----------------TCTCAAACCCT----TGT
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19249917 32 +  19376315 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCGAACACTT----AGT
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           11754 32 +     84689 GCTTA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAAACTCT----AGT
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3779503 32 +   6799190 GCTTA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAAACTCT----AGT
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20596328 44 -  62548349 GTTCA-CTGA-----CC---TT----------C------------A-A-T-----------ATTATACAT----CTAGTCTCAAACACT----AGT
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11089586 32 +  39895028 ATTCA-TTGA-----CC---CT----------T------------G-A-A-----------A----------------TCCCAAACACT----AGT
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             21674 32 +     74745 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAACACTT----AGT
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12708134 32 +  12821369 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAACACTT----AGT
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                 712 32 -     26467 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAACACTT----AGT
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           48579 32 +     63263 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAACACTT----AGT
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                  689 32 -     26361 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAACACTT----AGT
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 3866 32 -      7381 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAACACTT----AGT
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  47104 32 -     79256 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAACACTT----AGT
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196037206 32 + 196197964 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAACACTT----AGT
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11447372 32 +  11645122 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAACACTT----AGT
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   6058 32 -     46448 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAACACTT----AGT
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                3724 32 -     13212 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAACACTT----AGT
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 17401 32 -     55006 GTTCA-TTCA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAACACTT----AGT
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43842507 32 +  43892939 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAACACTT----AGT
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               18688 32 -     24607 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAACACTT----AGT
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               6055 32 -     27140 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAACACTT----AGT
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                702183 42 +    802869 GTTCA-CTGA-----CC---CT----------TGATG-A-CCTTTA-A-A-----------T----------------TCTCAAACCCT----AGT
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43439089 32 -  43563597 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCGAACACGT----AGT
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4451903 32 -   4543643 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCGAACACGT----AGT
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            147262 32 +    252755 gttca-taga-----ct---tc----------c------------a-a-a-----------a----------------tctcaaaccca----agt
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             37405 32 +     58827 gttca-taga-----ct---tc----------c------------a-a-a-----------a----------------tctcaaaccca----agt
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36875130 15 +  64221397 -------------------------------------------------------------A----------------CTCCAAACCCT----CAT
i Marmota_marmota.CZRN01000005.1                        I 16 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             2225 32 -     87323 GTCCA-ATGA-----CC---CT----------C------------A-A-A-----------A----------------TCTCAAACACT----AGT
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               14568 32 +     15977 ATTTA-TGGG-----TT---CT----------T------------A-A-T-----------G----------------TTTTACTACCT----GTC
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1048257 32 -  26018355 ATTTA-TGGG-----TT---TT----------T------------A-A-A-----------A----------------TCCTAATACCA----GTT
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_475714                    519 32 +       551 GTTCA-TTGA-----GC---TT----------A------------G-A-A-----------A----------------TTTCAAACCCT----CGT
i Mesoplodon_bidens.MesBid_scaffold_475714              C 0 N 0
s Microcebus_murinus.CM007691.1                          16511351 32 +  47401472 TCTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TTACAAGGCCT----AGT
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  39505 43 -     48017 TTCCA-CTGG-----TC---CT----------T------------G-A-G-----------ATCATATAT----CTCATCTGAAA-TCT----GGT
i Microgale_talazaci.MicTal_scaffold_34660              I 8 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               24071 41 -     32043 GTTCA--CGA-----CC---CTTGGTAAGCTTC------------G-A-A-----------A----------------TCTCAAACCCT----AGT
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22821006 32 -  98408828 ACTTA-CCAG-----TT---CT----------T------------A-A-A-----------A----------------TTCTAATACCT----GAT
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8212190 42 +  10048721 GTTCA-TTGA-----CC---CT----------TGATG-A-CCTTTG-A-A-----------A----------------TCTCAAACTCT----AGT
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            36679 42 +     45743 GTTCA-TTGA-----CC---CT----------TGATG-A-CCTTTG-A-A-----------A----------------TCTCAAACTCT----AGT
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         3650 32 +     29742 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAACACTT----AGT
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        12716 32 -    104932 GTTCA-ATGA-----CC---CT----------C------------G-A-A-----------A----------------TCTCAAACACT----AGT
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     6740 32 +      8497 GCTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCACAAGGCCT----AGT
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 147794 32 +    154973 GTTCA-TTGA-----GC---TT----------A------------G-A-A-----------A----------------TCTCAAACCCT----TGT
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                162617 42 +    265003 ATTCA-TTGA-----CC---CTTAATAAGCTTT------------G-A-A-----------A----------------TCTCAAATCCT----AGT
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  2983 32 -     19904 GCTCA-CTGA-----CC---TC----------A------------G-A-A-----------A----------------TCTCAAACCCT----AGT
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  146136 33 -    168139 GTTTA-TTTA-----CC---CT----------T------------A-AAA-----------A----------------TCTCAAACACT----AGT
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          23632 42 -    100666 GTTCA-TTGA-----CC---CC----------TGATA-A-ACTTTG-A-A-----------A----------------TCTCAAACCCT----AGT
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             13487 32 +     98495 GCTTA-CTGA-----GC---CT----------C------------A-A-A-----------A----------------TCCCAAATTCT----AGT
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4425590 32 -  28371801 GTCCA-ATGA-----CC---CT----------C------------A-A-A-----------A----------------TCTCAAACACT----AGT
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     91590 33 -    117718 ATTCA-TTGA-----TC---CT----------G------------A-AAA-----------A----------------TCCCAAATCCT----AGT
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               970497 42 +   8389877 GTTCA-TTGA-----CC---CT----------TGATG-A-ACTTTG-A-A-----------A----------------TCTCAAACCCT----AGT
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5021922 42 +   6462685 GTTCA-TTGA-----CC---CT----------TGATGGA-C-TTTG-A-A-----------A----------------TCTCAAACCCT----AGT
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3468000 42 -   3747815 GTTCA-TTGA-----CC---CT----------TGATG-A-ACTTTG-A-A-----------A----------------TCTCAAACCCT----AGT
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        13243 42 +     66751 GTTCA-TTGA-----CC---CT----------TGATG-A-ACTTTG-A-A-----------A----------------TCTCAAACCCT----AGT
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             6243 44 -      8794 GTGCA-CTGA-----CT---CT----------T------------G-A-A-----------A-C---TATACATCTAGTTCCAAATCCT----ACT
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nasalis_larvatus.k141_153429                              10127 32 +     48152 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAACCCTT----GGT
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4486106 32 -  14209539 GTTCA-ATGA-----CC---CT----------C------------G-A-A-----------A----------------TCTCAAACACT----AGT
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3952406 32 -   4490290 GTTCA-TTGA-----GC---TT----------A------------G-A-A-----------A----------------TCTCAAACCCT----TGT
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Nomascus_annamensis.k141_224620                             724 32 -      2316 GTTCA-TTGA-----CC---CT----------T------------C-A-A-----------A----------------CCCTAAAACTT----AAT
i Nomascus_annamensis.k141_224620                       C 0 C 0
s Nomascus_concolor.k141_226614                              2821 32 -      5092 GTTCA-TTGA-----CC---CT----------T------------C-A-A-----------A----------------CCCTAAAACTT----AAT
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_1004198                           1383 32 +      1448 GTTCA-TTGA-----CC---CT----------T------------C-A-A-----------A----------------CCCTAAAACTT----AAT
i Nomascus_gabriellae.k141_1004198                      I 44 n 28
s Nomascus_siki_b.tarseq_80                             26573 32 -  18771707 GTTCA-TTGA-----CC---CT----------T------------C-A-A-----------A----------------CCCTAAAACTT----AAT
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  4243 32 +      4512 GTTCA-TTGA-----CC---CT----------T------------C-A-A-----------A----------------CCCTAAAACTT----AAT
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                32370 32 +   3668941 ATTCA-TTGA-----CC---CT----------T------------G-A-A-----------A----------------TCTCAAACACT----AGT
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65568208 32 -  95554990 GCTTA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAAACTCT----AGT
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            4934 32 +      6470 GCTTA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAAACTCT----AGT
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65670541 32 +  89412551 GCTTA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAAACTCT----AGT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Octodon_degus.JH651621.1                                3687090 33 +  10294119 ATTCA-CTGA-----TC---TT----------T------------A-AAC-----------A----------------TTCCAAATCCC----AGC
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             680768 32 -   3126709 GTTCA-ATGA-----CC---CT----------C------------A-A-A-----------A----------------TCTCAAACACT----AGT
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1081159 32 +   1425656 GTTCA-CTGA-----CC---TC----------A------------G-A-A-----------A----------------TCTCAAACCCT----AGT
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         38462 32 +     78940 GTTCA-CTGA-----CC---TC----------A------------G-A-A-----------A----------------TCTCAAACCCT----AGT
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  126271 32 +    145789 ATTTA-CCAG-----TC---CT----------T------------A-A-A-----------A----------------TCCTAATACCT----GAT
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  38456 32 +     62360 ATTTA-TGGG-----TC---CT----------T------------A-A-A-----------A----------------TCCAAATACCT----GGT
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7226091 32 -   7562323 GTTCA-TTGA-----GC---TT----------A------------G-A-A-----------A----------------TCTCAAACCCT----TGT
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              61198 44 -     66828 GTTCA-ATGA-----CC---CT----------C------------A-G-T-----------ATTA--TACT--TCTAGTCTCAACTGCT----AAT
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141877876 32 + 163896628 GTTCA-TTGA-----CT---GT----------T------------A-A-A-----------A----------------TTTCAAACCCC----TCT
i Oryctolagus_cuniculus.CM000803.1                      I 327 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      309663 32 -    505867 ATTCA-TTGA-----CC---CT----------T------------G-A-A-----------A----------------TCTCAAAAACT----AGT
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        1847 32 -     53940 GCTTA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAAACGCT----AGT
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18009828 32 -  38779656 GCTTA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAAACGCT----AGT
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134078751 32 - 275406953 GTTCA-CTGA-----CC---TC----------A------------G-A-A-----------A----------------TCTCAAACCCT----AGT
i Ovis_aries.CM001582.2                                 I 10 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      79965 32 +    140051 GTTCA-CTGA-----CC---TC----------A------------G-A-A-----------A----------------TCTCAAACCCT----AGT
i Ovis_canadensis.OviCan_scaffold_6251                  I 10 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  35525 32 +    295523 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------G----------------TCTCAAACACT----AGT
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3639275 32 +  18214204 GTTCA-TTGA-----CC---GT----------T------------A-A-A-----------G----------------TCTCAAACACT----AGT
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5028951 32 -   6340057 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------G----------------TCTCAAACACT----AGT
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1067610 32 -   1292953 GTTCA-CTGA-----CC---TC----------A------------G-A-A-----------A----------------TCTCAAACCCT----AGT
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188157883 32 - 188283584 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCGAACACTT----AGT
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                               975 32 +     25005 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCGAACACTT----AGT
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47515260 32 +  47705337 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCGAACACTT----AGT
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 69250 32 -    104429 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCGAACACTT----AGT
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    7779 32 +     14967 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCGAACACTT----AGT
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 3644 32 -      7628 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCGAACACTT----AGT
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    117013 33 -    135482 GTTCA-TTGA-----CC---CT----------T------------A-AAA-----------A----------------TCTCAAACACT----AGT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           6531 32 -     23713 GCTTA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TTCTAAACTCT----AGT
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            25845 32 -     27972 GCTTA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAAACTCT----AGT
i Perodicticus_potto.k141_713187                        C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4951839 32 -   8017169 ATTTA-TGGG-----TC---CT----------T------------A-A-A-----------G----------------TCCAAATACCT----GGC
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    14806 26 -     36578 -------TGA-----CT---TT----------T------------A-T-A-----------A----------------TCACAAGTCCT----AGT
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071               549 32 +      8220 GTTCA-TTGA-----GC---TT----------A------------G-A-A-----------A----------------TCTCAAACCCT----TGT
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Piliocolobus_badius.k141_1987485                           3660 32 -      5908 GTTCA-TTGA-----CT---CT----------T------------A-A-A-----------A----------------TCCTAAACCTC----AGT
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       4278 32 -     17985 GTTCA-TTGA-----CT---CT----------T------------A-A-A-----------A----------------TCCTAAACCTC----AGT
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            3645 32 +      7694 GTTCA-TTGA-----CT---CT----------T------------A-A-A-----------A----------------TCCTAAACCTC----AGT
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26742129 32 +  26888534 GTTCA-TTGA-----CT---CT----------T------------A-A-A-----------A----------------TCCTAAACCTC----AGT
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pithecia_albicans.k141_991845                             45080 31 -     61926 GTTCC-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TGCCCAAACTT----AG-
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        26463 31 +     78826 GTTCC-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TGCCCAAACTT----AG-
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                             10511 31 -     15800 GTTCC-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TGCCCAAACTT----AG-
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        13710 31 -     16101 GTTCC-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TGCCCAAACTT----AG-
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          6939 31 +      9673 GTTCC-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TGCCCAAACTT----AG-
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13475939 31 -  19735023 GTTCC-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TGCCCAAACTT----AG-
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           14842 31 -     31692 GTTCC-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TGCCCAAACTT----AG-
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           7011 32 +     21690 GTTCA-TTGA-----AC---TT----------A------------G-A-A-----------A----------------TCTCAAACCCT----CCT
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       24173 32 +     44506 GTTCC-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TACCCAAACTT----AGT
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        24386 32 +     67491 GTTCC-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TACCCAAACTT----AGT
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      14625 32 -     98129 GTTCC-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TACCCAAACTT----AGT
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     24225 32 +    147771 GTTCC-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TACCCAAACTT----AGT
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                          861 32 -     43940 GTTCC-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TACCCAAACTT----AGT
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          4944 32 -     55515 GTTCC-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TACCCAAACTT----AGT
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         24298 32 +    152463 GTTCC-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TACCCAAACTT----AGT
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       2015 32 -    119457 GTTCC-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TACCCAAACTT----AGT
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         14021 32 +    134592 GTTCC-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TACCCAAACTT----AGT
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          24608 32 -     75465 GTTCC-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TACCCAAACTT----AGT
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              188765 32 -    373494 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAAAACTT----AAT
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19809412 32 +  19899266 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAAAACTT----AAT
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               7407 32 -     15069 GTTCG-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAACCCTT----AGT
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              7522 32 +     14865 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAACCCTT----AGT
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6849688 32 +  12164890 GTGCA-TTGA-----CT---CT----------T------------A-A-A-----------A----------------TCCCAAACCCT----AGT
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     19862 32 -     30946 nnnnn-nnnn-----nn---nn----------n------------n-n-n-----------n----------------nnnnnnnnnnn----nnn
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         4766 32 +     11805 GCTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCCAAACCCT----AGT
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           44114 32 +     52369 GCTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCCAAACCCT----AGT
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         36501 32 -     44753 GCTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCCAAACTCT----AGT
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            18424 32 +     27322 GCTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCCAAACCCT----AGT
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       18058 32 -     53241 GCTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCCAAACTCT----AGT
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         40322 32 -     48185 GCTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCCAAACTCT----AGT
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           36656 32 +     77221 ATTTA-TGGG-----TT---CT----------T------------A-A-T-----------G----------------TTTTAATACCT----GGT
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            5267 42 -     27784 GTTCA-TTGA-----CC---ATTGGTAAGCTCT------------G-A-A-----------A----------------TTTCAAACCCT----AAT
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        247902 32 -    344369 GTCCA-ATGA-----CC---CT----------C------------A-A-A-----------A----------------TCTCAAACACT----AGT
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13247188 42 -  17261082 GTTCA-CTGA-----CC---CT----------TGATG-A-CCTTTG-A-A-----------T----------------TCTCAAACCCT----ATT
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             605138 42 -   3946241 GTTCA-CTGA-----CC---CT----------TGATG-A-CCTTTG-A-A-----------T----------------TCTCAAACCCT----ATT
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131535546 33 - 161321710 GCTCA-TTGA-----CC---CT----------T------------A-A-AA----------G----------------TCTCAAACACT----AGT
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             31511 32 +     56732 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAACCCTT----CGT
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6808009 32 +   6970761 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAACCCTT----CAT
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             7398 32 +     18040 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAACCCTT----CAT
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                17271 32 +     68503 GTTCA-CTGA-----CC---TC----------A------------G-A-A-----------A----------------TCTCAAACCCT----AGT
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1789066 41 +   2252614 GTTCA--TGA-----CC---TT----------TGATG-A-CCTTTG-A-A-----------A----------------TCTCAAACCCT----AGT
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                            1794 32 -     17045 ATTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAACCCTT----CGT
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206379282 32 - 206558726 GTTCA-CTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAACCCTT----CGT
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44858184 32 -  45163003 ATTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAACCCTT----CGT
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                20524 42 +    109198 GTCCA-CTGA-----CC---CT----------TGATG-A-CCTTCG-A-A-----------T----------------TCTCAAACCCT----AGT
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       9438 32 +     12214 GTTCA-CTGA-----CC---TC----------A------------G-A-A-----------A----------------TCTCAAACCCT----AGT
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15674027 32 -  43202129 TTTCC-TTTA-----CC---CT----------T------------A-A-A-----------A----------------TCCCCAAACTT----AGT
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        5940 32 +     34089 GTTCC-TTTA-----CC---TT----------T------------A-A-A-----------A----------------TCCCCAAACTT----AGT
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              5882 32 -     60842 GTTCC-TTTA-----CC---CT----------T------------A-A-A-----------A----------------TCCCCAAACTT----AGT
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              5975 32 +     67014 GTTCC-TTTA-----CC---CT----------T------------A-A-A-----------A----------------TCCCCAAACTT----AGT
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              5953 32 +     60816 GTTCC-TTTA-----CC---CT----------T------------A-A-A-----------A----------------TCCCCAAACTT----AGT
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 5890 32 -     76454 GTTCC-TTTA-----CC---CT----------T------------A-A-A-----------A----------------TCCCCAAACTT----AGT
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17342622 32 -  30362882 GTTCC-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCCCAAACTT----AAT
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         21983 32 -     62485 GTTCC-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCCCAAACTT----AAT
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   37898 32 -    114521 GTTCA-TTGC-----CC---CT----------T------------G-A-A-----------A----------------TCTCAAGCCCT----CAT
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        5014 32 +     15331 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAACCCTT----AGT
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      10389 32 +     20762 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAACCCTT----AGT
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         120394 32 +    130994 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAACCCTT----AGT
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           39173 32 +     46263 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAACCCTT----AGT
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     32318 32 +     42640 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAACCCTT----AGT
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        15340 32 +     30600 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------CCCTAACCCTT----AGT
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  101618 32 -    120886 ATTTA-TGGA-----TC---CT----------T------------A-A-A-----------A----------------TTCTAATACCT----GGT
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            20085 32 +    739146 GCTCA-TTGA-----TG---CT----------T------------C-A-A-----------A----------------TCTCAAGCCCT----AGT
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17767654 31 -  27805282 GCTCA-CTGA-----CC---CT----------A------------A-A-A-----------A----------------TCTCC-ACCTT----AGT
i Sorex_araneus.JH798170.1                              I 9 C 0
s Spermophilus_dauricus.KZ294190.1                        2241123 16 +   2842873 TCTCA-TTGG-----CC---TT----------T------------A-A------------------------------------------------
i Spermophilus_dauricus.KZ294190.1                      C 0 I 15
s Suricata_suricatta.SurSur_flattened_line_20339            28795 33 +     62062 GTTTA-TTTG-----CC---CT----------T------------A-AAA-----------A----------------TCTCAAACACT----AGT
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189273294 43 + 218635234 TCTCA-CAGA-----TC---TT----------A------------G-A-AATCTCTTAGACA----------------TCTCTAACCCT----AGT
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        16517 32 -  13920577 GTTCA-TTGA-----CC---CT----------T------------C-A-A-----------A----------------CCCTAAAACTT----AAT
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                1495 42 +     20549 GTTCA-TTGA-----TC---TT----------TGATG-G-GCTTTG-A-A-----------A----------------TCTCAAACCTT----AGT
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               15911 44 +     45698 GTGCA-CTGA-----CT---CT----------T------------G-A-A-----------ATCATACAT----CTAGGTCCAAATCCT----ACT
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      808346 32 +   1148477 GTTCA-TTGA-----CC---CT----------C------------G-A-C-----------A----------------TTTCAAACCCT----AGT
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  59059 32 +     99546 GTTCA-TTGA-----CC---CT----------C------------A-A-C-----------A----------------TTTCAAACCCT----AGT
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194009411 32 - 194193292 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCGAACACGT----AGT
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             40310  6 -     47444 GTTCA-T-----------------------------------------------------------------------------------------
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 I 7
s Tolypeutes_matacus.TolMat_scaffold_1305119                   92 38 -       594 GTGCA-CTGA-----CT---TT----------T------------G-A-A-----------ATCATACAT----CTAGTTCCAAAT----------
i Tolypeutes_matacus.TolMat_scaffold_1305119            C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  137242 41 -    259118 GTTCA--CCA-----CC---CTTGGTAAGCTTT------------G-A-A-----------A----------------TCTTAAACCCA----AGT
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        28661 32 +     38948 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAACCCTT----AGT
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   22221 32 -     32910 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAACCCTT----AGT
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      4122 32 -     12939 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAACCCTT----AGT
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       3550 32 -     14244 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAACCCTT----AGT
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           44948 32 -     54611 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAACCCTT----AGT
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        2744 32 -     11566 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAACCCTT----AGT
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     4928 32 -     15592 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAACCCTT----AGT
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          3580 32 +     14371 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAACCCTT----AGT
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   1866 32 +     12481 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAACCCTT----AGT
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        1847 32 -     24393 GTTCA-TTGA-----CC---CT----------G------------A-A-A-----------A----------------TCCTAACCCTT----AGT
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       6991 32 -     28054 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAACCCTT----AGT
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44661775 32 -  44834318 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAACCCTT----AGT
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       4092 32 +     13828 GTTCA-TTGA-----CC---CT----------T------------A-A-A-----------A----------------TCCTAACCCTT----AGT
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   6631 32 +     90398 GTTCA-CTGA-----TC---TT----------A------------G-A-A-----------A----------------TCTCAAACTGT----AGT
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16087323 44 +  31416278 ACTCA-TTGA-----CC---CT----------T------------G-A-T-----------ATTACACA----ACTAGCCTCTAACACT----AGC
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2794667 32 -   3938065 TCTCA-CCGA-----CC---TT----------T------------AAA-A-----------A----------------TCCCAAACTC-----ACT
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    6771 33 +     13056 TCTCA-CCGA-----CC---TT----------T------------AAA-A-----------A----------------TCCCAAACTCT----AGT
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69314808 32 -  96451834 GTTCA-TTGA-----GC---TT----------A------------G-A-A-----------A----------------TCTCAAACCCT----TGT
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   8467 32 +     10241 GTCCA-CTGG-----CC---CT----------T------------G-A-A-----------A----------------TCTTAAATCTT----CAT
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6516024 32 +  28682327 GTTCA-ATGA-----CC---CT----------C------------G-G-A-----------A----------------TCTCAAACACT----AGT
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  6323 32 -     20643 GCTCA-TTGA-----CT---CT----------T------------A-A-A-----------A----------------TCCCAAACCCT----AGT
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             25858 32 -     33872 GCTCA-TTGA-----CT---CT----------T------------A-A-A-----------A----------------TCCCAAACCCT----AGT
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1525837 32 -   2331223 GTTCA-CTGA-----CC---TT----------T------------G-A-A-----------A----------------TCTCCAACCCT----AGT
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                139765 32 -    281493 ATTCA-TTGA-----CC---TT----------G------------G-A-A-----------A----------------TCTCAAACACT----AGT
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       128093 15 -    134049 -------------------------------------------------------------A----------------TTCCAAACCCT----AGT
i Xerus_inauris.XerIna_scaffold_7898                    I 16 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        215503 32 -    227762 GTTCA-ATGA-----CC---CT----------C------------A-A-A-----------A----------------TCTCAAACACT----AGT
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     17634 15 -     20485 -------------------------------------------------------------A----------------TCCAAAATCCT----AGT
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           8306 32 -      8775 GTTCA-TTGA-----GC---TT----------A------------G-A-A-----------A----------------TCTCAAACTCT----CGT
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Ochotona_princeps.JH802095.1                            4996729 2205 -  23139505 I
e Perognathus_longimembris.PerPac_flattened_line_19359        892 695 +     49596 I
e Spilogale_gracilis.SpiGra_flattened_line_905             236262 1976 -    276980 I
e Procavia_capensis.ProCapCap_scaffold_149274                2467 1156 -      9567 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Megaderma_lyra.MegLyr_scaffold_3562                       64783 239 -    234502 I
e Heterohyrax_brucei.HetBruBak_scaffold_25354               61360 1157 +     73687 I
e Echinops_telfairi.JH980316.1                           22999931  2 -  44670279 I
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1008 325 -      5782 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19677 266 -    119109 I
e Galeopterus_variegatus.GalVar_scaffold_354               157483 1695 +    324696 I
e Tarsius_wallacei.k141_48636                               60532 3805 +     65473 I
e Tarsius_lariang.k141_609102                               27216 3812 +     42269 I
e Rattus_norvegicus.chr11                                13915860 1475 +  90463843 I
e Nannospalax_galili.KL201303.1                            119252 614 +    362372 I
e Mus_spretus.CM004110.1                                 74333573 2703 +  97876770 I
e Mus_pahari.LT608305.1                                  67557037 2889 +  89017189 I
e Mus_musculus.chr16                                     75490838 2711 +  98207768 I
e Mus_caroli.LT608236.1                                  70767758 3738 +  92629107 I
e Dolichotis_patagonum.DolPat_scaffold_14102                36772 276 -     73477 I
e Dasyprocta_punctata.DasPun_flattened_line_634             59553 276 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                18462 277 +     26546 I
e Ctenodactylus_gundi.CteGun_scaffold_447                  209506 3013 -    956709 I
e Cephalopachus_bancanus.k141_702587                         8788 3391 +     21754 I
e Cavia_tschudii.CavTsc_scaffold_488                       177453 271 +    436027 I
e Cavia_porcellus.DS562889.1                             15799262 290 -  24440124 I
e Cavia_aperea.AVPZ01000278.1                            15787326 288 -  24422027 I
e Carlito_syrichta.NW_007248099.1                          309764 3411 +    345090 I
e Pan_paniscus.CM003386.1                               127575888 480 - 205426864 I
e Pan_troglodytes.CM009241.2                            120153042 480 - 196562556 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               15198  9 +    209709 CAGCTCAC-T
s Acinonyx_jubatus.LLWD01000356.1                         2035218  9 +   3721120 AAGCTCTC-T
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    115074  9 -    189883 CAATTCAC-T
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10658785  9 +  23371972 CAGCTCTC-C
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7095920  9 -  16596857 CATCTCTC-C
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   19472  9 -     22067 CAGCTCAC-T
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   2925  8 -     60446 CA-CTCAC-T
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         3642  8 -     29318 CA-CTCAC-T
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         2578  8 +     38766 CA-CTCAC-T
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          3536  8 -     80423 CA-CTCAC-T
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            11526  9 -     18050 CAGCTCAC-T
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_1710068                               1242  9 +      1555 CAGCTCAC-T
i Alouatta_caraya.k141_1710068                          C 0 C 0
s Alouatta_discolor.k141_811576                             12199  9 -     21359 CAGCTCAC-T
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                1822  9 +      2129 CAGCTCAT-T
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_2177643                          1199  9 -      1868 CAGCTCAC-T
i Alouatta_macconnelli.k141_2177643                     C 0 C 0
s Alouatta_nigerrima.k141_3537692                            1248  9 +      1660 CAGCTCAT-T
i Alouatta_nigerrima.k141_3537692                       C 0 C 0
s Alouatta_palliata.k141_2764429                             1168  9 -      1480 CAGCTCAC-T
i Alouatta_palliata.k141_2764429                        C 0 C 0
s Alouatta_puruensis.k141_131505                              455  9 +      4855 CAGCTCAT-T
i Alouatta_puruensis.k141_131505                        C 0 C 0
s Alouatta_seniculus.k141_1531728                            1383  9 -      1692 CAGCTCAC-T
i Alouatta_seniculus.k141_1531728                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3521642  9 +   4113121 GAGCTCTC-T
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      391740  9 -    631301 CAGCTCTC-T
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            32226  5 +     33004 GAGC-----T
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 63868  9 +     78111 CAGCTCAC-T
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            6811  9 +     22701 CAGCTCAC-T
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5750768  9 +   9889416 CAGCTCAC-T
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             7357  9 -    104377 CAGCTCAC-T
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               7359  9 +     23246 CAGCTCAC-T
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_231055                     1247  9 -      2492 CAGCTCAT-G
i Aplodontia_rufa.AprRuf_scaffold_231055                I 15 C 0
s Arctocebus_calabarensis.k141_587554                        2158  9 +      9265 CAGCTCCC-T
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                10158  9 -     29036 TAGCTCTC-T
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9540635  9 +  39197703 CAGCTCAC-T
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             61908  9 +     85812 CAGCTCAC-T
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                12921  9 +     89302 CAGCTCAC-T
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             17422  9 -     58268 CAGCTCAC-T
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             65416  9 +    119057 CAGCTCAC-T
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               7385  9 -     25888 CAGCTCAC-T
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 7890  9 -     16375 CAGCTCCC-T
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               1506  9 +      6337 CAGCTCCC-T
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26381613  9 +  51448160 CAGCTCTC-T
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        6786  9 -     13118 CAGCTCTC-T
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   44747  9 -     72089 GAGCTCTC-T
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6561369  9 +   6870073 GAGCTCTC-T
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138141491  9 - 161108492 GAGCTCTC-T
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     574021  9 -    998990 GAGCTCTC-T
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136297224  9 - 158972876 GAGCTCTC-T
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1234305  9 -   1914593 GAGCTCTC-T
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               115272  6 -    171031 ---GTCAC-T
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 14301  6 +    125063 ---CTCAC-T
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                16344  6 -    216513 ---CTCAC-T
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        8887  6 -    134917 ---CTCAC-T
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3220764  9 -   8989139 CAGCTCTC-T
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           398465  9 -  15254737 CAGCTCTC-T
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2974201  9 +   6889770 CAGCTCTC-T
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11520960  9 +  39901454 CAGCTCTC-C
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   15985  9 +     87036 CAGCTCTC-C
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11267629  9 -  35597290 CAGCTCTC-C
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11090162  9 +  39895921 CAGCTCTC-C
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16457175  9 -  44759192 CAGCTCTC-C
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21326703  9 + 157394656 GAGCTCTC-T
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135707920  9 - 157403528 GAGCTCTC-T
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_790727                    31  9 -      1550 CAGCTGTC-T
i Capromys_pilorides.CapPil_scaffold_790727             C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               60945  9 +     67245 CAGCTCTC-T
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   32329  4 +     33760 CAGA------
i Castor_canadensis.CasCan_scaffold_47037               C 0 I 6
s Catagonus_wagneri.CatWag_scaffold_1305                   160368  7 -    276539 CAGCT--C-T
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18892109  9 -  29618158 CAGCTCAC-T
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 9653  9 -     26817 CAGCTCAC-T
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                13896  9 +     25043 CAGCTCAC-T
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4365138  9 +   7569818 CAGCTCTC-T
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         4895  9 -      9338 CAGCTCTC-T
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6556872  8 +   6739814 CC-CTCAC-t
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      28346  8 +     60454 CA-CTCAC-T
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          3553  8 -     21101 CC-CTCAC-T
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         60863  8 -    107033 CC-CTCAC-T
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        3742  8 -     17608 CA-CTCAC-T
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                           901  8 +     45019 CA-CTCAC-T
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                            985  8 +     15177 CA-CTCAC-T
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          3785  8 +     16677 CA-CTCAC-T
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           25955  8 +     35983 CA-CTCAC-T
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11992483  8 +  12117833 CA-CTCAC-T
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46479241  8 +  46592721 CA-CTCAC-T
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      42795  8 -     45581 CA-CTCAC-T
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       3797  8 +     35577 CA-CTCAC-T
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        3570  8 -     25661 CA-CTCAC-T
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        3549  8 -     17744 CA-CTCAC-T
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        23155  8 +     37128 CA-CTCAC-T
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           3975  9 -      6963 CAGCTTGC-T
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           60162  9 -     68416 CAGCTTCC-T
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            9214  9 +     13308 CAGCTTCC-T
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             6926  9 -     18223 CAGCTCAT-T
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             23944  9 +     25473 CAGCTCAT-T
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           42984  9 +     57117 CAGCTCAT-T
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          47663  9 +     54541 CAGCTCAT-T
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15962940  9 +  43084221 CAGCCCCC-T
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         72469  6 +    196370 ---CTCAC-T
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          16649  6 +     40510 ---CTCAC-T
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15141152  8 -  15256731 CA-CTCAC-T
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      35761  8 -     53260 CA-CTCAC-T
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101146320  8 + 101219884 CA-CTCAc-t
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                17744  9 -     21363 CAGCTTGC-T
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           763049  9 +    964067 CAGCTTGC-T
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10888309  8 +  10971483 CA-CTCAC-T
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147666237  8 + 156195979 CA-CTCAC-T
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            18220  8 +     23629 CA-CTCAC-T
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60620795  9 +  78930452 CAGTCCAc-t
i Condylura_cristata.JH655880.1                         C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 279588  9 -    399297 CAACTCAA-T
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53031692  9 +  72327488 CAACTCGC-T
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_848148              771  5 +      1327 CAG----C-T
i Crocidura_indochinensis.CroInd_scaffold_848148        C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            53275  9 -     70449 CAGCAATC-T
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 32297  9 -     67205 CAGCTTCT-T
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          184848  9 -   6883506 CAACTTGC-T
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16846027  9 +  31942871 CAGCTCCC-T
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80038236  9 -  96802777 CAGCTCTC-T
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18700236  9 -  18957592 CAGCTCTC-T
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 323790  9 +    993696 CAGCTCTC-T
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   4427  9 +    151128 CAGCTCTC-T
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   158139  9 +    228994 CATCTCCC-T
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3658536  9 +   4240102 cagttcac-c
i Dipodomys_ordii.KN672545.1                            I 229 I 863
s Dipodomys_stephensi.DipSte_scaffold_84338                   893  9 -     11986 cagttcac-t
i Dipodomys_stephensi.DipSte_scaffold_84338             I 213 I 866
s Eidolon_helvum.KE772537.1                                 13509  9 +     24177 GAGCTCTC-T
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1492972  9 +   1727528 GAGCTCTC-T
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7829961  9 +  15467074 CAGCTCAC-T
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        240668  9 -    369425 CAACACAC-T
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01204657.1                            102  9 +      1708 CAACACAC-T
i Ellobius_talpinus.LOJH01204657.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85873358  9 +  99434291 CATCTCTC-C
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4708199  9 +   6522550 cagttttc-t
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5854428  9 -   7175178 CAGCTCTC-T
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13352928  9 +  41866177 CAGCTCTC-T
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          14418  9 +     92910 CAGCTCTC-T
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11641702  9 +  16010500 CAGCTCAC-T
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48778331  8 -  48907691 CA-CTCAC-T
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          316454  9 +    330699 CAGCTCTC-T
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             62908  9 +     89355 CAGCTCTC-T
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              6201  9 +     13586 CAGCTCCC-T
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               6133  9 -      6809 CAGCTCCC-T
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            12607  9 +     36558 CAGCTCCC-T
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             8924  9 +     60246 CAACTCCC-C
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                12406  9 +    109717 CAGCTCCC-T
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                  391  9 -     19505 CAGCTCCC-C
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                17066  9 +     27497 CAGCTCCC-T
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           19522  9 +     26808 CAGCTCCC-C
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                34260  9 +     46535 CAGCTCCC-T
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              16986  9 -     29447 CAGCTCCC-T
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129894190  9 - 159252932 AAGCTCTC-T
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129281274  9 - 158578461 AAGCTCTC-T
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 22412  9 +     52776 AAGCTCTC-T
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13892602  9 -  19261668 CAGCTCCC-T
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     212064  9 -    847004 CAGCTCCC-T
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           14435  9 -     43889 CAGCTCCC-T
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          11503  9 +     27357 CAGCTCCC-T
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    182768  9 -    189561 GAGCTCTC-T
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           15008  9 -     18683 TAGTTCAC-T
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               6912  9 -     14630 CAGCTCAC-T
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119654012  9 - 195582420 CAGCTCAC-t
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   78420  9 +    118900 TACCTCAC-T
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         2991  9 +     10286 CAGCTCCC-T
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             1471  9 -     11661 CAGCTCCC-T
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             6797  9 +     56096 CAGCTCCC-T
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        30046  9 -     42470 CAGCTCCC-T
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        46674  9 -     54384 CAGCTCCC-T
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              18470  9 +     53719 CAGCTATC-T
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                28991  9 -     91191 GAGCTCTC-T
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2552321  9 +  31725842 CAGCTCCC-T
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              148326  9 +    277961 TAGCTCTC-T
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      279641  9 -    477199 AAGTGCTC-T
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_345408               638  9 -       919 CAGTGCTC-T
i Hipposideros_galeritus.HipGal_scaffold_345408         I 41 C 0
s Hoolock_leuconedys.ctg79                                      6602  9 -   7690867 CAGCTCAC-T
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 18540  9 -     67322 CAGCTATC-T
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hylobates_abbotti.k141_164775                              1385  9 -      2073 CAGCTCAC-T
i Hylobates_abbotti.k141_164775                         C 0 C 0
s Hylobates_agilis.k141_1362131                               394  9 +      1075 CAGCTCAC-T
i Hylobates_agilis.k141_1362131                         I 32 C 0
s Hylobates_klossii.k141_183401                               938  9 -      1272 CAGCTCAC-T
i Hylobates_klossii.k141_183401                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14626290  9 -  25970782 CAGCTCAC-T
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_950183                              986  9 +      2027 CAGCTCAC-T
i Hylobates_muelleri.k141_950183                        C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             35450  9 -     60944 CAGCTCAC-T
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     7393  9 +     22540 CAGCTCAC-T
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7127237  9 +  13083262 CAGCTCAC-T
i Ictidomys_tridecemlineatus.JH393315.1                 I 15 C 0
s Indri_indri.k141_5141390                                   1523  9 -      3181 CAGTTCCC-T
i Indri_indri.k141_5141390                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              10443  9 +     17520 CAGCTCTC-T
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH727545.1                                 2419  9 -      4668 CAACCTCA-T
i Jaculus_jaculus.JH727545.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               25046  9 +     37189 CAGCTCTC-C
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          51506  9 -    147782 CAGCTCAC-T
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    4868  9 +     26176 CAGCTTTC-T
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258408349  9 - 285822530 CAGCTCCC-T
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        25100  9 +     39228 CAGCTCCC-T
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            54486  9 +     63517 CAGCTCCC-T
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        79748  9 +    116806 CAGCTCCC-T
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     32739  9 -     33031 CAGCTCCC-T
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3087221  9 -   3498232 CAGTTCTC-T
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    14875  9 +     22452 CAGCTTGT-T
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            137399  9 +   3060487 CAGCTCTC-T
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19249949  8 +  19376315 CC-CTCAC-T
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           11786  9 +     84689 TGGCTCCC-T
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3779535  9 +   6799190 TGGCTCCC-T
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20596372  9 -  62548349 CAGCTCAC-T
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11089618  9 +  39895028 CAGCTCTC-C
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             21706  8 +     74745 CA-CTCAC-T
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12708166  8 +  12821369 CA-CTCAC-T
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                 744  8 -     26467 CA-CTCAC-T
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           48611  8 +     63263 CA-CTCAC-T
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                  721  8 -     26361 CA-CTCAC-T
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 3898  8 -      7381 CA-CTCAC-T
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  47136  8 -     79256 CA-CTCAC-T
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196037238  8 + 196197964 CA-CTCAC-t
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11447404  8 +  11645122 CA-CTCAC-t
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   6090  8 -     46448 CA-CTCAC-T
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                3756  8 -     13212 CA-CTCAC-T
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 17433  8 -     55006 CA-CTCAC-T
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43842539  8 +  43892939 CA-CTCAC-T
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               18720  8 -     24607 CA-CTCAC-T
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               6087  8 -     27140 CA-CTCAC-T
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                702225  9 +    802869 GAGCTCTC-T
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43439121  8 -  43563597 CC-CTCAC-T
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4451935  8 -   4543643 CC-CTCAC-T
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            147294  9 +    252755 cagctctc-t
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             37437  9 +     58827 cagctctc-t
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36875145  9 +  64221397 CAGCTCAC-T
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             2257  9 -     87323 CATCTCTC-C
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               14600  9 +     15977 CAACTCAC-T
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1048289  8 -  26018355 C-ACTCAC-T
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                      30  9 -     12939 CAGCTCTC-T
i Mesoplodon_bidens.MesBid_scaffold_96348               N 0 C 0
s Microcebus_murinus.CM007691.1                          16511383  9 +  47401472 CAGCTCCC-T
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  39548  9 -     48017 CTGTTCTG-T
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               24112  9 -     32043 CAGCTCTC-T
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22821038  9 -  98408828 CAACATAC-T
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8212232  9 +  10048721 CTGCTCTC-T
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            36721  9 +     45743 CTGCTCTC-T
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         3682  8 +     29742 CA-GTCAC-T
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        12748  9 -    104932 CAGTTCTC-T
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     6772  9 +      8497 CAGCTCCC-T
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 147826  9 +    154973 CAGCTCTC-T
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                162659  9 +    265003 CAGTTCTC-T
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  3015  9 -     19904 GAGCTCTC-T
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  146169  9 -    168139 CAGCTATC-T
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          23674  9 -    100666 CAGCTTTC-T
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             13519  9 +     98495 TATTTTAC-T
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4425622  9 -  28371801 CATTTCTC-C
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     91623  9 -    117718 CAGCTGCC-T
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               970539  9 +   8389877 CAGCTTTC-T
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5021964  9 +   6462685 CAGCTTTC-T
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3468042  9 -   3747815 CAGCTTTC-T
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        13285  9 +     66751 CAGCTTTC-T
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             6287  9 -      8794 CAACTTGC-T
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nasalis_larvatus.k141_153429                              10159  8 +     48152 CA-CTCAC-T
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4486138  9 -  14209539 CAGTTCTC-T
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3952438  9 -   4490290 CAGCTCTC-T
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Nomascus_annamensis.k141_224620                             756  9 -      2316 CAGCTCAC-T
i Nomascus_annamensis.k141_224620                       C 0 C 0
s Nomascus_concolor.k141_226614                              2853  9 -      5092 CAGCTCAC-T
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_1032971                            423  9 -      1918 CAGCTCAC-T
i Nomascus_gabriellae.k141_1032971                      I 28 C 0
s Nomascus_siki_b.tarseq_80                             26605  9 -  18771707 CAGCTCAC-T
i Nomascus_siki_b.tarseq_80                         C 0 I 12
s Nomascus_siki_a.k141_595747                                  4275  9 +      4512 CAGCTCAC-T
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                32402  9 +   3668941 CAGCTCTC-C
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65568240  9 -  95554990 CAGCTCCC-T
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            4966  9 +      6470 CAGCTCCC-T
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65670573  9 +  89412551 CAGCTCCC-T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Octodon_degus.JH651621.1                                3687123  9 +  10294119 CAGCTGCC-T
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             680800  9 -   3126709 CAATTCTC-T
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1081191  9 +   1425656 GAGCTCTC-T
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         38494  9 +     78940 GAGCTCTC-T
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  126303  9 +    145789 CAACATAC-T
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  38488  9 +     62360 CAACTCAC-T
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7226123  9 -   7562323 CAGCTCTC-T
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              61242  9 -     66828 CAGCTCAC-T
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141877908  9 + 163896628 CATCTTGC-T
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      309695  9 -    505867 CAGCTCTC-C
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        1879  9 -     53940 CAGCTCCC-T
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18009860  9 -  38779656 CAGCTCCC-T
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134078783  9 - 275406953 GAGCTCTC-T
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      79997  9 +    140051 GAGCTCTC-T
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  35557  9 +    295523 AAGCTCTC-T
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3639307  9 +  18214204 AAGCTCTC-T
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5028983  9 -   6340057 AAGCTCTC-T
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1067642  9 -   1292953 GAGCTCTC-T
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188157915  8 - 188283584 CC-CTCAC-T
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              1007  8 +     25005 CC-CTCAC-T
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47515292  8 +  47705337 CC-CTCAC-T
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 69282  8 -    104429 CC-CTCAC-T
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    7811  8 +     14967 CC-CTCAC-T
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 3676  8 -      7628 CC-CTCAC-T
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    117046 10 -    135482 CAGTTTTCTT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           6563  9 -     23713 CAGCTCCC-G
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            25877  9 -     27972 CAGCTCCC-G
i Perodicticus_potto.k141_713187                        C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4951871  9 -   8017169 CAACTCAC-T
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    14832  8 -     36578 C-CTTCCC-C
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071               581  9 +      8220 CAGCTCTC-T
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Piliocolobus_badius.k141_1987485                           3692  8 -      5908 CA-CTCAC-T
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       4310  8 -     17985 CA-CTCAC-T
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            3677  8 +      7694 CA-CTCAC-T
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26742161  8 +  26888534 CA-CTCAC-t
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pithecia_albicans.k141_991845                             45111  6 -     61926 ---CTCAC-T
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        26494  6 +     78826 ---CTCAC-T
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                             10542  6 -     15800 ---CTCAC-T
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        13741  6 -     16101 ---CTCAC-T
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          6970  6 +      9673 ---CTCAC-T
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13475970  6 -  19735023 ---CTCAC-T
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           14873  6 -     31692 ---CTCAC-T
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           7043  9 +     21690 CAGCTCTC-T
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       24205  9 +     44506 CAGCTCAC-T
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        24418  9 +     67491 CAGCTCAC-T
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      14657  9 -     98129 CAGCTCAC-T
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     24257  9 +    147771 CAGCTCAC-T
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                          893  9 -     43940 CAGCTCAC-T
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          4976  9 -     55515 CAGCTCAC-T
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         24330  9 +    152463 CAGCTCAC-T
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       2047  9 -    119457 CAGCTCAC-T
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         14053  9 +    134592 CAGCTCAC-T
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          24640  9 -     75465 CAGCTCAC-T
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              188797  9 -    373494 CAGCTCAc-t
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19809444  9 +  19899266 CAGCTCAC-T
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               7439  8 -     15069 CA-CTCAC-T
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              7554  8 +     14865 CA-CTCAC-T
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6849720  9 +  12164890 CAGCTCCC-T
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     19894  9 -     30946 nnnnnnnn-n
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         4798  9 +     11805 CAGCTCCC-T
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           44146  9 +     52369 CAGCTCCC-T
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         36533  9 -     44753 CAGCTCCC-T
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            18456  9 +     27322 CAGCTCCC-T
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       18090  9 -     53241 CAGCTCCC-T
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         40354  9 -     48185 CAGCTCCC-T
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           36688  9 +     77221 CAACTCAC-T
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            5309  9 -     27784 CAGCTCTC-T
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        247934  9 -    344369 CATCTCTC-C
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13247230  9 -  17261082 GAGCTCTC-T
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             605180  9 -   3946241 GAGCTCTC-T
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131535579  9 - 161321710 AAGCTCTC-T
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             31543  8 +     56732 CA-CTCAC-T
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6808041  8 +   6970761 CA-CTCAC-T
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             7430  8 +     18040 CA-CTCAC-T
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                17303  9 +     68503 GAGCTCTC-T
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1789107  9 +   2252614 GAGCTCTC-T
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                            1826  8 -     17045 CA-CTCAC-T
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206379314  8 - 206558726 CA-CTCAC-T
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44858216  8 -  45163003 CA-CTCAC-T
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                20566  9 +    109198 GAGCTCTC-T
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       9470  9 +     12214 GAGCTCTC-T
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15674059  9 -  43202129 CAGCTCAc-t
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        5972  9 +     34089 CAGCTCAC-T
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              5914  9 -     60842 CAGCTCAC-T
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              6007  9 +     67014 CAGCTCAC-T
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              5985  9 +     60816 CAGCTCAC-T
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 5922  9 -     76454 CAGCTCAC-T
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17342654  9 -  30362882 CAGCTCAC-T
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         22015  9 -     62485 CAGCTCAC-T
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   37930  9 -    114521 CAGTTCAC-T
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        5046  8 +     15331 CA-CTCAC-T
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      10421  8 +     20762 CA-CTCAC-T
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         120426  8 +    130994 CA-CTCAC-T
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           39205  8 +     46263 CA-CTCAC-T
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     32350  8 +     42640 CA-CTCAC-T
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        15372  8 +     30600 CA-CTCAC-T
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  101650  9 -    120886 AATCTCAC-T
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            20117  9 +    739146 CATCTCAC-T
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17767685  5 -  27805282 CAG----C-T
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2241154  9 +   2842873 TAGCTCAC-T
i Spermophilus_dauricus.KZ294190.1                      I 15 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            28828  9 +     62062 CAGCTATT-T
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189273337  7 + 218635234 CAGCT--C-T
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        16549  9 -  13920577 CAGCTCAC-T
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                1537  9 +     20549 CAGCTCTC-T
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               15955  9 +     45698 CAACTTGC-T
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      808378  9 +   1148477 CAGCTCTC-T
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  59091  9 +     99546 CAGCTCTC-T
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194009443  8 - 194193292 CC-CTCAC-T
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             40323  9 -     47444 CACCTCCC-T
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         I 7 C 0
s Tolypeutes_matacus.TolMat_scaffold_1305119                  130  9 -       594 CAGCTTGC-T
i Tolypeutes_matacus.TolMat_scaffold_1305119            C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  137283  9 -    259118 CAGCTCTC-T
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        28693  8 +     38948 CA-CTCAC-T
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   22253  8 -     32910 CA-CTCAC-T
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      4154  8 -     12939 CA-CTCAC-T
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       3582  8 -     14244 CA-CTCAC-T
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           44980  7 -     54611 CA-CTCAC--
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        2776  8 -     11566 CA-CTCAC-T
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     4960  8 -     15592 CA-CTCAC-T
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          3612  8 +     14371 CA-CTCAC-T
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   1898  8 +     12481 CA-CTCAC-T
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        1879  8 -     24393 CA-CTCAC-T
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       7023  8 -     28054 CA-CTCAC-T
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44661807  8 -  44834318 CA-CTCAC-T
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       4124  7 +     13828 CA-CTCAC--
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   6663  7 +     90398 CGGCT--C-T
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16087367  9 +  31416278 CAGATGAC-T
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2794699  9 -   3938065 CAGCTTGC-T
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    6804  9 +     13056 CAGCTTGC-T
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69314840  9 -  96451834 CAGCTCTC-C
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   8499  9 +     10241 CAGTTCAC-T
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6516056  9 +  28682327 CAGCTCTC-C
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  6355  9 -     20643 CAGCTCCC-T
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             25890  9 -     33872 CAGCTCCC-T
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1525869  9 -   2331223 CAGCTCTC-T
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                139797  9 -    281493 CAGCTCTC-C
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       128108  9 -    134049 CAGCTCAC-T
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        215535  9 -    227762 CAGTTCTC-T
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     17649  9 -     20485 CAACTCAC-T
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           8338  9 -      8775 CAGCTCTC-T
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Ochotona_princeps.JH802095.1                            4996729 2205 -  23139505 I
e Perognathus_longimembris.PerPac_flattened_line_19359        892 695 +     49596 I
e Spilogale_gracilis.SpiGra_flattened_line_905             236262 1976 -    276980 I
e Procavia_capensis.ProCapCap_scaffold_149274                2467 1156 -      9567 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Megaderma_lyra.MegLyr_scaffold_3562                       64783 239 -    234502 I
e Heterohyrax_brucei.HetBruBak_scaffold_25354               61360 1157 +     73687 I
e Echinops_telfairi.JH980316.1                           22999931  2 -  44670279 I
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1008 325 -      5782 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19677 266 -    119109 I
e Galeopterus_variegatus.GalVar_scaffold_354               157483 1695 +    324696 I
e Tarsius_wallacei.k141_48636                               60532 3805 +     65473 I
e Tarsius_lariang.k141_609102                               27216 3812 +     42269 I
e Rattus_norvegicus.chr11                                13915860 1475 +  90463843 I
e Nannospalax_galili.KL201303.1                            119252 614 +    362372 I
e Mus_spretus.CM004110.1                                 74333573 2703 +  97876770 I
e Mus_pahari.LT608305.1                                  67557037 2889 +  89017189 I
e Mus_musculus.chr16                                     75490838 2711 +  98207768 I
e Mus_caroli.LT608236.1                                  70767758 3738 +  92629107 I
e Dolichotis_patagonum.DolPat_scaffold_14102                36772 276 -     73477 I
e Dasyprocta_punctata.DasPun_flattened_line_634             59553 276 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                18462 277 +     26546 I
e Ctenodactylus_gundi.CteGun_scaffold_447                  209506 3013 -    956709 I
e Cephalopachus_bancanus.k141_702587                         8788 3391 +     21754 I
e Cavia_tschudii.CavTsc_scaffold_488                       177453 271 +    436027 I
e Cavia_porcellus.DS562889.1                             15799262 290 -  24440124 I
e Cavia_aperea.AVPZ01000278.1                            15787326 288 -  24422027 I
e Carlito_syrichta.NW_007248099.1                          309764 3411 +    345090 I
e Pan_paniscus.CM003386.1                               127575888 480 - 205426864 I
e Pan_troglodytes.CM009241.2                            120153042 480 - 196562556 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               15207 12 +    209709 GGAG-TGGAT-G---A-A
s Acinonyx_jubatus.LLWD01000356.1                         2035227  8 +   3721120 GGAT-TGAC---------
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    115083 12 -    189883 ATAG-AGCCT-G---A-G
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10658794  8 +  23371972 GGAT-TGAC---------
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7095929  8 -  16596857 CGAC-TGAC---------
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   19481 12 -     22067 GGAA-GAAAT-G---A-G
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   2933 12 -     60446 GGAA-TGGAT-G---A-A
i Allenopithecus_nigroviridis.k141_2469532              C 0 I 4
s Allochrocebus_lhoesti.k141_3566948                         3650 12 -     29318 GGAA-TGGAT-G---A-A
i Allochrocebus_lhoesti.k141_3566948                    C 0 I 4
s Allochrocebus_preussi.k141_1108977                         2586 12 +     38766 GGAA-TGGAT-G---A-A
i Allochrocebus_preussi.k141_1108977                    C 0 I 4
s Allochrocebus_solatus.k141_371672                          3544 12 -     80423 GGAA-TGGAT-G---A-A
i Allochrocebus_solatus.k141_371672                     C 0 I 4
s Alouatta_belzebul.k141_1818029                            11535 12 -     18050 GGAG-TGAAT-A---A-A
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_1710068                               1251 12 +      1555 GGAG-TGAAT-A---A-A
i Alouatta_caraya.k141_1710068                          C 0 C 0
s Alouatta_discolor.k141_811576                             12208 12 -     21359 GGAG-TGAAT-A---A-A
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                1831 12 +      2129 GGAG-TGAAT-A---A-A
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_2177643                          1208 12 -      1868 GGAG-TGAAT-A---A-A
i Alouatta_macconnelli.k141_2177643                     C 0 C 0
s Alouatta_nigerrima.k141_3537692                            1257 12 +      1660 GGAG-TGAAT-A---A-A
i Alouatta_nigerrima.k141_3537692                       C 0 C 0
s Alouatta_palliata.k141_2764429                             1177 12 -      1480 GGAG-TGAAT-A---A-A
i Alouatta_palliata.k141_2764429                        C 0 C 0
s Alouatta_puruensis.k141_131505                              464 12 +      4855 GGAG-TGAAT-A---A-A
i Alouatta_puruensis.k141_131505                        C 0 C 0
s Alouatta_seniculus.k141_1531728                            1392 12 -      1692 GGAG-TGAAT-A---A-A
i Alouatta_seniculus.k141_1531728                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3521651  8 +   4113121 GGAG-TGAC---------
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      391749  8 -    631301 GAAT-TGAC---------
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 I 6
s Antilocapra_americana.AntAmePen_scaffold_42841            32231  8 +     33004 GGAG-TGAC---------
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 63877 12 +     78111 GGAG-CGAAT-G---A-A
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            6820 12 +     22701 GGAG-CGAAT-G---A-A
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5750777 12 +   9889416 GGAG-CGAAT-G---A-A
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             7366 12 -    104377 GGAG-CGAAT-G---A-A
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               7368 12 +     23246 GGAG-AGAAT-G---A-A
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_231055                     1256 12 -      2492 AGAG-CGAAT-G---G-A
i Aplodontia_rufa.AprRuf_scaffold_231055                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        2167 12 +      9265 AGAG-AAAAT-G---A-G
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                10167  8 -     29036 GGAT-CAAC---------
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 I 6
s Ateles_geoffroyi_b.tarseq_2582                             9540644 12 +  39197703 GGAG-TGAAT-A---A-A
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             61917 12 +     85812 GGAG-TGAAT-A---A-A
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                12930 12 +     89302 GGAG-TGAAT-A---A-A
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             17431 12 -     58268 GGAG-TGAAT-A---A-A
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             65425 12 +    119057 GGAG-TGAAT-A---A-A
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               7394 12 -     25888 GGAG-TGAAT-A---A-A
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 7899 12 -     16375 AGAG-AAAAT-G---A-A
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               1515 12 +      6337 AGAG-AAAAT-G---A-A
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26381622  8 +  51448160 GGAG-TGAC---------
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        6795  8 -     13118 GGAG-TGAC---------
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   44756  8 -     72089 GGAG-TGAC---------
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6561378  8 +   6870073 GGAG-TGAC---------
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138141500  8 - 161108492 GGAG-TGAC---------
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     574030  8 -    998990 GGAG-TGAC---------
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136297233  8 - 158972876 GGAG-TGAC---------
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1234314  8 -   1914593 GGAG-TGAC---------
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               115278 12 -    171031 GGAG-TGAAT-G---A-A
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 14307 12 +    125063 GGAG-TGAAT-G---A-A
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                16350 12 -    216513 GGAG-TGAAT-G---A-A
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        8893 12 -    134917 GGAG-TGAAT-G---A-A
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3220773  1 -   8989139 G-----------------
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           398474  1 -  15254737 G-----------------
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2974210  1 +   6889770 G-----------------
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11520969  7 +  39901454 AGAC-TGA----------
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   15994  7 +     87036 AGAC-TGA----------
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11267638  7 -  35597290 AGAC-CGA----------
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11090171  7 +  39895921 AGAC-TGA----------
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16457184  7 -  44759192 AGAC-TGA----------
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21326712  8 + 157394656 GGAG-TGAC---------
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135707929  8 - 157403528 GGAG-TGAC---------
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_790727                    40 12 -      1550 GGAA-TGAAT-G---G-A
i Capromys_pilorides.CapPil_scaffold_790727             C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               60954  8 +     67245 GGAT-TGAC---------
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 I 6
s Catagonus_wagneri.CatWag_scaffold_1305                   160375  8 -    276539 GAAG-TGAC---------
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18892118 12 -  29618158 GGAG-TGAAT-C---A-A
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 9662 12 -     26817 GGAG-TGAAT-C---A-A
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                13905 12 +     25043 GGAG-TGAAT-C---A-A
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4365147  8 +   7569818 GGAG-TGAC---------
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         4904  8 -      9338 GGAG-TGAC---------
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6556880  7 +   6739814 ggag-tgg----------
i Cercocebus_atys.KQ010443.1                            C 0 I 5
s Cercocebus_chrysogaster.k141_2328246                      28354  7 +     60454 GGAG-TGG----------
i Cercocebus_chrysogaster.k141_2328246                  C 0 I 5
s Cercocebus_lunulatus.k141_4634644                          3561  7 -     21101 GGAG-TGG----------
i Cercocebus_lunulatus.k141_4634644                     C 0 I 5
s Cercocebus_torquatus.k141_3969582                         60871  7 -    107033 GGAG-TGG----------
i Cercocebus_torquatus.k141_3969582                     C 0 I 5
s Cercopithecus_ascanius.k141_4123525                        3750 12 -     17608 GGAG-TGGAT-G---A-A
i Cercopithecus_ascanius.k141_4123525                   C 0 I 4
s Cercopithecus_cephus.k141_3893260                           909 12 +     45019 GGAG-TGGAT-G---A-A
i Cercopithecus_cephus.k141_3893260                     C 0 I 4
s Cercopithecus_diana.k141_2561715                            993 12 +     15177 GGAG-TGGAT-G---A-A
i Cercopithecus_diana.k141_2561715                      C 0 I 4
s Cercopithecus_hamlyni.k141_129805                          3793 12 +     16677 GGAG-TGGAT-G---A-A
i Cercopithecus_hamlyni.k141_129805                     C 0 I 4
s Cercopithecus_lowei.k141_623764                           25963 12 +     35983 GGAG-TGGAT-G---A-A
i Cercopithecus_lowei.k141_623764                       C 0 I 4
s Cercopithecus_albogularis.ctg51                              11992491 12 +  12117833 GGAG-TGGAT-G---A-A
i Cercopithecus_albogularis.ctg51                             C 0 I 4
s Cercopithecus_mona.ctg12                               46479249 12 +  46592721 GGAG-TGGAT-G---A-A
i Cercopithecus_mona.ctg12                              C 0 I 4
s Cercopithecus_neglectus.k141_2078027                      42803 12 -     45581 GGAG-TGGAT-G---A-A
i Cercopithecus_neglectus.k141_2078027                  C 0 I 4
s Cercopithecus_nictitans.k141_1129315                       3805 12 +     35577 GGAG-TGGAT-G---A-A
i Cercopithecus_nictitans.k141_1129315                  C 0 I 4
s Cercopithecus_petaurista.k141_64532                        3578 12 -     25661 GGAG-TGGAT-G---A-A
i Cercopithecus_petaurista.k141_64532                   C 0 I 4
s Cercopithecus_pogonias.k141_3109732                        3557 12 -     17744 GGAG-TGGAT-G---A-A
i Cercopithecus_pogonias.k141_3109732                   C 0 I 4
s Cercopithecus_roloway.k141_2263608                        23163 12 +     37128 GGAG-TGGAT-G---A-A
i Cercopithecus_roloway.k141_2263608                    C 0 I 4
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           3984 12 -      6963 GGAG-TGAAC-A---A-A
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           60171 12 -     68416 AGAG-AAAAT-G---A-A
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            9223 12 +     13308 AGAG-AAAAT-G---A-A
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             6935 12 -     18223 GGAG-TGAAT-G---A-A
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             23953 12 +     25473 GGAG-TGAAT-G---A-A
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           42993 12 +     57117 GGAG-TGAAT-G---A-A
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          47672 12 +     54541 GGAG-TGAAT-G---A-A
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15962949 12 +  43084221 AACA-TGAAT-A---G-A
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         72475 12 +    196370 GGAG-TGAAT-G---A-A
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          16655 12 +     40510 GGAG-TGAAT-G---A-A
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15141160 12 -  15256731 GGAA-TGGAT-G---A-A
i Chlorocebus_aethiops.ctg22                            C 0 I 4
s Chlorocebus_pygerythrus.k141_1486215                      35769 12 -     53260 GGAA-TGGAT-G---A-A
i Chlorocebus_pygerythrus.k141_1486215                  C 0 I 4
s Chlorocebus_sabaeus.CM001963.2                        101146328 12 + 101219884 ggaa-tggat-g---a-a
i Chlorocebus_sabaeus.CM001963.2                        C 0 I 4
s Choloepus_didactylus.ChoDid_scaffold_36182                17753 12 -     21363 GGAG-TGAAT-A---A-A
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           763058 12 +    964067 GGAG-TGAAT-A---A-A
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10888317 12 +  10971483 GGAG-TGGAT-G---A-A
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147666245 12 + 156195979 GGAG-TGGAT-G---A-A
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            18228 12 +     23629 GGAG-TGGAT-G---A-A
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60620804 12 +  78930452 ggaa-gaaacaa---a--
i Condylura_cristata.JH655880.1                         C 0 I 1
s Cricetomys_gambianus.CriGam_scaffold_949                 279597 12 -    399297 ACAG-GGAAT-G---A-G
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53031701 12 +  72327488 ATAG-GGAAT-C---A-A
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_848148              776 11 +      1327 GGAA-TAAAT-G---A--
i Crocidura_indochinensis.CroInd_scaffold_848148        C 0 I 2
s Cryptoprocta_ferox.CryFer_flattened_line_19014            53284  8 -     70449 GGAT-TGAC---------
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 32306 12 -     67205 GGAG-TAAGT-A---G-A
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          184857 10 -   6883506 GGAG-TGAAC-A------
i Dasypus_novemcinctus.JH568778.1                       C 0 I 1
s Daubentonia_madagascariensis.ctg11                     16846036 12 +  31942871 AGAG-AAAAT-G---A-A
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80038245  8 -  96802777 GGAG-TGAC---------
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18700245  8 -  18957592 GGAT-TGAC---------
i Desmodus_rotundus.KZ672188.1                          C 0 I 5
s Dicerorhinus_sumatrensis.PEKH010003161.1                 323799  8 +    993696 GGAG-TGAC---------
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   4436  8 +    151128 GGAG-TGAC---------
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   158148  8 +    228994 AATA-TGAA---------
i Dinomys_branickii.DinBra_scaffold_1996                C 0 I 2
s Dipodomys_ordii.KN672545.1                              3659408 13 +   4240102 gcag-agaat-g---aca
i Dipodomys_ordii.KN672545.1                            I 863 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  1768 13 -     11986 GCAG-AGAAT-T---ACA
i Dipodomys_stephensi.DipSte_scaffold_84338             I 866 C 0
s Eidolon_helvum.KE772537.1                                 13518  8 +     24177 GCAG-TGAC---------
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1492981  8 +   1727528 GGAG-TGAC---------
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7829970 12 +  15467074 GGAG-GAAGT-G---A-A
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        240677 12 -    369425 ATAG-GGAAT-G---G-A
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01204657.1                            111 12 +      1708 ATAG-GGAAT-G---A-A
i Ellobius_talpinus.LOJH01204657.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85873367  8 +  99434291 AGAC-TGTC---------
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4708208  1 +   6522550 c-----------------
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5854437  8 -   7175178 GGGG-TGAC---------
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13352937  8 +  41866177 GGGG-TGAC---------
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          14427  8 +     92910 GGGG-TGAC---------
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11641711 11 +  16010500 AAGA-TAAAT-A---A--
i Erinaceus_europaeus.JH835290.1                        C 0 I 1
s Erythrocebus_patas.Contig8                             48778339 12 -  48907691 GGAA-TGGAT-G---A-A
i Erythrocebus_patas.Contig8                            C 0 I 4
s Eschrichtius_robustus.EscRob_flattened_line_685          316463  8 +    330699 GGAG-TGAC---------
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             62917  8 +     89355 GGAG-TGAC---------
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              6210 12 +     13586 AGAG-AAAAT-G---A-G
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               6142 12 -      6809 AGAG-AAAAT-G---A-G
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            12616 12 +     36558 AGAG-AAAAT-G---A-A
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             8933 12 +     60246 AGAG-AAAAT-G---A-A
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                12415 12 +    109717 AGAG-AAAAT-G---A-G
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                  400 12 -     19505 AGAG-AAAAT-G---A-A
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                17075 12 +     27497 AGAG-AAAAT-G---A-G
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           19531 12 +     26808 AGAG-AAAAT-G---A-A
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                34269 12 +     46535 AGAG-AAAAT-G---A-G
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              16995 12 -     29447 AGAG-AAAAT-G---A-G
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129894199  8 - 159252932 GGAT-TGAC---------
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129281283  8 - 158578461 GGAT-TGAC---------
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 22421  8 +     52776 GGAT-TGAC---------
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13892611 12 -  19261668 AGAG-TGAAT-G---G-A
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     212073 12 -    847004 AGAG-ACAAT-G---A-G
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           14444 12 -     43889 AGAG-ACAAT-G---A-G
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          11512 12 +     27357 AGAG-ACAAT-G---A-G
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    182777  8 -    189561 GGAG-TGAC---------
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           15017 12 -     18683 GAAG-GGTAT-G---A-T
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               6921 12 -     14630 GGAG-TGGAT-G---A-A
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119654021 12 - 195582420 ggag-tggat-g---a-a
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   78429 12 +    118900 GGAG-GGTAT-G---A-A
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         3000 12 +     10286 AGAG-AAAAT-G---A-A
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             1480 12 -     11661 AGAG-AAAAT-G---A-A
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             6806 12 +     56096 AGAG-AAAAT-G---A-A
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        30055 12 -     42470 AGAG-AAAAT-G---A-A
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        46683 12 -     54384 AGAG-AAAAT-G---A-A
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              18479  8 +     53719 AAAT-TGAC---------
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                29000  8 -     91191 GGAG-TAAC---------
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2552330 12 +  31725842 AGAG-TGAAT-G---G-A
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              148335  8 +    277961 GGAG-TAAC---------
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      279650  8 -    477199 GGAG-TGAC---------
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_345408               647  8 -       919 GGAG-TGAC---------
i Hipposideros_galeritus.HipGal_scaffold_345408         C 0 C 0
s Hoolock_leuconedys.ctg79                                      6611 12 -   7690867 GGTG-TGGAT-G---A-A
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 18549  8 -     67322 GGTT-TGAC---------
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hylobates_abbotti.k141_164775                              1394 12 -      2073 GGTG-TGGAT-G---A-A
i Hylobates_abbotti.k141_164775                         C 0 C 0
s Hylobates_agilis.k141_1362131                               403 12 +      1075 GGTG-TGGAT-G---A-A
i Hylobates_agilis.k141_1362131                         C 0 C 0
s Hylobates_klossii.k141_183401                               947 12 -      1272 GGTG-TGGAT-G---A-A
i Hylobates_klossii.k141_183401                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14626299 12 -  25970782 GGTG-TGGAT-G---A-A
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_950183                              995 12 +      2027 GGTG-TGGAT-G---A-A
i Hylobates_muelleri.k141_950183                        C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             35459 12 -     60944 GGTG-TGGAT-G---A-A
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     7402 12 +     22540 GGAA-TGAAT-G---G-A
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7127246 12 +  13083262 GGAG-TGAAT-G---G-A
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_5141390                                   1532 12 -      3181 AGAG-AAAAT-G---A-A
i Indri_indri.k141_5141390                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              10452  8 +     17520 GGAG-TGAC---------
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH727545.1                                 2428 12 -      4668 GACA-GAAAT-G---A-G
i Jaculus_jaculus.JH727545.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               25055  8 +     37189 AGAG-TGAC---------
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          51515 12 -    147782 GGAG-TGAAT-A---A-A
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    4877  1 +     26176 C-----------------
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258408358 12 - 285822530 AGAG-AAAAT-G---A-A
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        25109 12 +     39228 AGAG-ACAAT-G---A-A
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            54495 12 +     63517 AGAG-ACAAT-G---A-A
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        79757 12 +    116806 AGAG-ACAAT-G---A-A
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     32748 12 -     33031 AGAG-ACAAT-G---A-A
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3087230  8 -   3498232 GGAT-TGAC---------
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    14884 12 +     22452 GAAG-TGAAT-G---A-A
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            137408  8 +   3060487 GGAG-TGAC---------
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19249957 12 +  19376315 GGAG-TGGAG-G---A-A
i Lophocebus_aterrimus.ctg55                            C 0 I 4
s Loris_lydekkerianus.k141_550999                           11795 12 +     84689 GGAG-AAAAT-G---A-G
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3779544 12 +   6799190 GGAG-AAAAT-G---A-G
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20596381 12 -  62548349 GGAG-TAAGT-A---A-A
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11089627  7 +  39895028 AGAC-CGA----------
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             21714 12 +     74745 GGAG-TGGAT-G---A-A
i Macaca_arctoides.k141_2201161                         C 0 I 4
s Macaca_assamensis.Contig65                             12708174 12 +  12821369 GGAG-TGGAT-G---A-A
i Macaca_assamensis.Contig65                            C 0 I 4
s Macaca_cyclopis.k119_883699                                 752 12 -     26467 GGAG-TGGAT-G---A-A
i Macaca_cyclopis.k119_883699                           C 0 I 4
s Macaca_fascicularis.k141_155037                           48619 12 +     63263 GGAG-TGGAT-G---A-A
i Macaca_fascicularis.k141_155037                       C 0 I 4
s Macaca_fuscata.k119_938422                                  729 12 -     26361 GGAG-TGGAT-G---A-A
i Macaca_fuscata.k119_938422                            C 0 I 4
s Macaca_leonina.k141_467472                                 3906 12 -      7381 GGAG-TGGAT-G---A-A
i Macaca_leonina.k141_467472                            C 0 I 4
s Macaca_maura.k141_251854                                  47144 12 -     79256 GGAG-TGGAT-G---A-A
i Macaca_maura.k141_251854                              C 0 I 4
s Macaca_mulatta.NC_041755.1                            196037246 12 + 196197964 ggag-tggat-g---a-a
i Macaca_mulatta.NC_041755.1                            C 0 I 4
s Macaca_nemestrina.KQ004885.1                           11447412 12 +  11645122 ggag-tggat-g---a-a
i Macaca_nemestrina.KQ004885.1                          C 0 I 4
s Macaca_nigra.k141_282495                                   6098 12 -     46448 GGAG-TGGAT-G---A-A
i Macaca_nigra.k141_282495                              C 0 I 4
s Macaca_radiata.k141_3680256                                3764 12 -     13212 GGTG-TGGAT-G---A-A
i Macaca_radiata.k141_3680256                           C 0 I 4
s Macaca_siberu.k141_741907                                 17441 12 -     55006 GGAG-TGGAT-G---A-A
i Macaca_siberu.k141_741907                             C 0 I 4
s Macaca_silenus.Contig12                                43842547 12 +  43892939 GGAG-TGGAT-G---A-A
i Macaca_silenus.Contig12                               C 0 I 4
s Macaca_thibetana.k99_662710                               18728 12 -     24607 GGAG-TGGAT-G---A-A
i Macaca_thibetana.k99_662710                           C 0 I 4
s Macaca_tonkeana.k141_2870633                               6095 12 -     27140 GGAG-TGGAT-G---A-A
i Macaca_tonkeana.k141_2870633                          C 0 I 4
s Macroglossus_sobrinus.MacSob_scaffold_879                702234  8 +    802869 GCAG-TGAC---------
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43439129  7 -  43563597 GGAG-TGG----------
i Mandrillus_leucophaeus.scaffold125                    C 0 I 5
s Mandrillus_sphinx.Contig144                             4451943  7 -   4543643 GGAG-TGG----------
i Mandrillus_sphinx.Contig144                           C 0 I 5
s Manis_javanica.JSZB01003966.1                            147303  8 +    252755 caaa-tgaa---------
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             37446  8 +     58827 caaa-tgaa---------
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36875154 12 +  64221397 AGAG-TGAAT-G---G-A
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             2266  8 -     87323 ATAC-TGAC---------
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               14609 12 +     15977 GTAG-GGACT-G---A-G
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1048297 12 -  26018355 ACAG-GGAAT-G---A-A
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                      39  8 -     12939 GGAG-TGAC---------
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16511392 12 +  47401472 Agag-aaaat-g---a-a
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  39557 12 -     48017 GTAA-TAAGT-A---A-A
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               24121  8 -     32043 GGAT-TGAC---------
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 I 6
s Microtus_ochrogaster.CM001673.1                        22821047 12 -  98408828 ATAG-GGAAT-G---A-A
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8212241  8 +  10048721 GGAG-TGAC---------
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            36730  8 +     45743 GGAG-TGAC---------
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         3690 12 +     29742 GGAG-TGGAT-G---A-A
i Miopithecus_ogouensis.k141_2935907                    C 0 I 4
s Mirounga_angustirostris.MirAng_flattened_line_8852        12757  8 -    104932 GGAT-TGAC---------
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     6781 12 +      8497 AGAG-AAAAT-G---A-A
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 147835  8 +    154973 GGAG-TGAC---------
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                162668  8 +    265003 GGGA-TTAC---------
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 I 6
s Moschus_moschiferus.MosMos_scaffold_78805                  3024  8 -     19904 GGAG-TGAC---------
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  146178  8 -    168139 GGAT-TGAC---------
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          23683  1 -    100666 C-----------------
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             13528 12 +     98495 AGAG-GGTAT-G---A-A
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4425631  8 -  28371801 AGAC-TGAC---------
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     91632 12 -    117718 GGAA-TAAAT-G---G-A
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               970548  1 +   8389877 C-----------------
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5021973  1 +   6462685 C-----------------
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3468051  1 -   3747815 C-----------------
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        13294  1 +     66751 C-----------------
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             6296 12 -      8794 AGAG-TGAAT-A---A-A
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nasalis_larvatus.k141_153429                              10167 12 +     48152 GGAG-TGGAT-G---A-A
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4486147  8 -  14209539 GGAT-TGAC---------
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3952447  8 -   4490290 GGAG-TGAC---------
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Nomascus_annamensis.k141_224620                             765 12 -      2316 GGTG-TGGAT-G---A-A
i Nomascus_annamensis.k141_224620                       C 0 C 0
s Nomascus_concolor.k141_226614                              2862 12 -      5092 GGTG-TGGAT-G---A-A
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_1032971                            432 12 -      1918 GGTG-TGGAT-G---A-A
i Nomascus_gabriellae.k141_1032971                      C 0 C 0
s Nomascus_siki_b.tarseq_2373                            7520 13 +      7901 GGTGGTGGAT-G---A-A
i Nomascus_siki_b.tarseq_2373                       n 12 n 12
s Nomascus_siki_a.k141_595747                                  4284 12 +      4512 GGTG-TGGAT-G---A-A
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                32411  7 +   3668941 AGAC-CGA----------
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65568249 12 -  95554990 GGAG-AAAAT-G---A-G
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            4975 12 +      6470 GGAG-AAAAT-G---A-G
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65670582 12 +  89412551 GGAG-AAAAT-G---A-G
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Octodon_degus.JH651621.1                                3687132 12 +  10294119 GGAG-TGAAT-A---G-A
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             680809  8 -   3126709 GGAT-TGAC---------
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1081200  8 +   1425656 GGAG-TGAC---------
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         38503  8 +     78940 GGAG-TGAC---------
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  126312 12 +    145789 GTAG-GGAAT-G---A-A
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  38497 15 +     62360 ATAG-GGAAT-GAACA-A
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7226132  8 -   7562323 GGAG-TGAC---------
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              61251 12 -     66828 TGAG-TAAGT-G---A-A
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141877917 12 + 163896628 GAAG-TGAAT-G---A-G
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      309704  7 -    505867 AGAC-CGA----------
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        1888 12 -     53940 AGAG-ACAAT-G---A-G
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18009869 12 -  38779656 AGAG-ACAAT-G---A-G
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134078792  8 - 275406953 GGAG-TGAC---------
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      80006  8 +    140051 GGAG-TGAC---------
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  35566  8 +    295523 GGAT-TGAC---------
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3639316  8 +  18214204 GGAT-TGAC---------
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5028992  8 -   6340057 GGAT-TGAC---------
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1067651  8 -   1292953 GGAG-TGAC---------
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188157923 12 - 188283584 GGAG-TGGAG-G---A-A
i Papio_anubis.CM001492.2                               C 0 I 4
s Papio_cynocephalus.k141_45376                              1015 12 +     25005 GGAG-TGGAG-G---A-A
i Papio_cynocephalus.k141_45376                         C 0 I 4
s Papio_hamadryas.Contig15                               47515300 12 +  47705337 GGAG-TGGAG-G---A-A
i Papio_hamadryas.Contig15                              C 0 I 4
s Papio_kindae.k141_5458022                                 69290 12 -    104429 GGAG-TGGAG-G---A-A
i Papio_kindae.k141_5458022                             C 0 I 4
s Papio_papio.k141_979496                                    7819 12 +     14967 GGAG-TGGAG-G---A-A
i Papio_papio.k141_979496                               C 0 I 4
s Papio_ursinus.k141_1345919                                 3684 12 -      7628 GGAG-TGGAG-G---A-A
i Papio_ursinus.k141_1345919                            C 0 I 4
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    117056  8 -    135482 GGAT-ATAC---------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           6572 12 -     23713 AGAG-ACAAT-G---A-G
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            25886 12 -     27972 AGAG-ACGAT-G---A-G
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       1587 13 +     49596 tcag-agaat-g---aca
i Perognathus_longimembris.PerPac_flattened_line_19359  I 695 C 0
s Peromyscus_maniculatus.KI615518.1                       4951880 12 -   8017169 ATAG-GGAAT-G---A-A
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    14840  7 -     36578 AGAT-TGA----------
i Petromus_typicus.PetTyp_scaffold_33007                C 0 I 1
s Phocoena_phocoena.PhoPho_flattened_line_53071               590  8 +      8220 GGAG-TGAC---------
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Piliocolobus_badius.k141_1987485                           3700 12 -      5908 GGAG-TGGAT-G---A-A
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       4318 12 -     17985 GGAG-TGGAT-G---A-A
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            3685 12 +      7694 GGAG-TGGAT-G---A-A
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26742169 12 +  26888534 ggag-tggat-g---a-a
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pithecia_albicans.k141_991845                             45117 12 -     61926 GGAG-TGAAT-G---A-A
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        26500 12 +     78826 GGAG-TGAAT-G---A-A
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                             10548 12 -     15800 GGAG-TGAAT-G---A-A
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        13747 12 -     16101 GGAG-TGAAT-G---A-A
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          6976 12 +      9673 GGAG-TGAAT-G---A-A
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13475976 12 -  19735023 GGAG-TGAAT-G---A-A
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           14879 12 -     31692 AGAG-TGAAT-G---A-A
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           7052  8 +     21690 GGAG-TGAC---------
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       24214 12 +     44506 GGAG-TGAAT-G---A-A
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        24427 12 +     67491 GGAG-TGAAT-G---A-A
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      14666 12 -     98129 GGAG-TGAAT-G---A-A
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     24266 12 +    147771 GGAG-TGAAT-G---A-A
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                          902 12 -     43940 GGAG-TGAAT-G---A-A
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          4985 12 -     55515 GGAG-TGAAT-G---A-A
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         24339 12 +    152463 GGAG-TGAAT-G---A-A
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       2056 12 -    119457 GGAG-TGAAT-G---A-A
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         14062 12 +    134592 GGAG-TGAAT-G---A-A
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          24649 12 -     75465 GGAG-TGAAT-G---A-A
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              188806 12 -    373494 ggag-tggat-g---a-a
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19809453 12 +  19899266 GGAG-TGGAT-G---A-A
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               7447 12 -     15069 GGAG-TAGAT-G---A-A
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              7562 12 +     14865 GGCG-TGGAT-G---A-A
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6849729 12 +  12164890 AGAG-AAAAT-G---A-A
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     19903 12 -     30946 nnnn-nnnnn-n---n-n
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         4807 12 +     11805 AGAG-AAAAT-G---A-A
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           44155 12 +     52369 AGAG-AGAAT-G---A-A
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         36542 12 -     44753 AGAG-AGAAT-G---A-A
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            18465 12 +     27322 AGAG-AGAAT-G---A-A
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       18099 12 -     53241 AGAG-AAAAT-G---A-A
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         40363 12 -     48185 AGAG-AAAAT-G---A-A
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           36697 12 +     77221 GTAG-GGACT-G---A-G
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            5318  8 -     27784 GGAT-TGAC---------
i Pteronotus_parnellii.KE867983.1                       C 0 I 6
s Pteronura_brasiliensis.PteBra_flattened_line_1343        247943  8 -    344369 AGAC-TGAC---------
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13247239  8 -  17261082 GCAG-TGGC---------
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             605189  8 -   3946241 GCAG-TGGC---------
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131535588  8 - 161321710 GGAT-TGAC---------
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             31551 12 +     56732 GGAG-TGGAT-G---A-A
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6808049 12 +   6970761 GGAG-TGGAT-G---A-A
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             7438 12 +     18040 GGAG-TGGAT-G---A-A
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                17312  8 +     68503 GGAG-TGAC---------
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1789116  8 +   2252614 GGAG-TGAC---------
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                            1834 12 -     17045 GGAG-TGGAT-G---A-A
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206379322 12 - 206558726 GGAG-TGGAT-G---A-A
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44858224 12 -  45163003 GGAG-TGGAT-G---A-A
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                20575  8 +    109198 GCAG-TGAC---------
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       9479  8 +     12214 GGAG-TGAC---------
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15674068 12 -  43202129 ggag-tgaat-g---a-a
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        5981 12 +     34089 GGAG-TGAAT-G---A-A
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              5923 12 -     60842 GGAG-TGAAT-G---A-A
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              6016 12 +     67014 GGAG-TGAAT-G---A-A
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              5994 12 +     60816 GGAG-TGAAT-G---A-A
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 5931 12 -     76454 GGAG-TGAAT-G---A-A
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17342663 12 -  30362882 GGAG-TGAAT-C---A-A
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         22024 12 -     62485 GGAG-TGAAT-C---A-A
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   37939 11 -    114521 GGAA-TAAAT-G---A--
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 I 1
s Semnopithecus_entellus.k141_1572367                        5054 12 +     15331 GGAG-TGGAT-G---A-A
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      10429 12 +     20762 GGAG-TGGAT-G---A-A
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         120434 12 +    130994 GGAG-TGGAT-G---A-A
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           39213 12 +     46263 GGAG-TGGAT-G---A-A
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     32358 12 +     42640 GGAG-TGGAT-G---A-A
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        15380 12 +     30600 GGAG-TGGAT-G---A-A
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  101659  9 -    120886 GTAT-GAAAT--------
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 I 2
s Solenodon_paradoxus.SolPar_flattened_line_1012            20126 11 +    739146 GGAA-CAAAT-G---A--
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17767690  9 -  27805282 GGAA-TGAAT--------
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2241163 12 +   2842873 GGAG-TGAAT-G---G-A
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            28837  8 +     62062 GGAT-TGAC---------
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189273344  8 + 218635234 GAAG-TGAC---------
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        16558 12 -  13920577 GGTG-TGGAT-G---A-A
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                1546  8 +     20549 GGAG-TGAC---------
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               15964 12 +     45698 AGAG-TGAAT-A---A-A
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      808387  8 +   1148477 GGAG-TGGC---------
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  59100  8 +     99546 GGAG-TGAC---------
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194009451 12 - 194193292 GGAG-TGGAG-G---A-A
i Theropithecus_gelada.CM009951.1                       C 0 I 4
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             40332 12 -     47444 AGAT-TAAAT-G---A-A
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_1305119                  139 12 -       594 GGAG-TAAAC-A---A-A
i Tolypeutes_matacus.TolMat_scaffold_1305119            C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  137292  8 -    259118 GGAT-TGAC---------
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 I 6
s Trachypithecus_auratus.k141_738098                        28701 12 +     38948 GGAG-TGGAT-G---A-A
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   22261 12 -     32910 GGAG-TGGAT-G---A-A
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      4162 12 -     12939 GGAG-TGGAT-G---A-A
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       3590 12 -     14244 GGAG-TGGAT-G---A-A
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           44987  8 -     54611 -----TGGAT-C---A-A
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        2784 12 -     11566 GGAG-TGGAT-G---A-A
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     4968 12 -     15592 GGAG-TGGAT-G---A-A
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          3620 12 +     14371 GGAG-TGGAT-G---A-A
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   1906 12 +     12481 GGAG-TGGAT-G---A-A
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        1887 12 -     24393 GGAG-TGGAT-G---A-A
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       7031 12 -     28054 GGAG-TGGAT-G---A-A
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44661815 12 -  44834318 GGAG-TGGAT-G---A-A
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       4131  8 +     13828 -----TGGAT-C---A-A
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   6670  8 +     90398 GGAG-TGAC---------
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16087376 12 +  31416278 GGAG-TAAGT-T---A-A
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2794708 12 -   3938065 TGAG-TGAAG-G---A-G
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    6813 12 +     13056 TGAG-AGAAG-G---A-G
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69314849  8 -  96451834 GGAG-TGAC---------
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   8508 11 +     10241 GGAA-CAAAT-A---A--
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 I 1
s Ursus_maritimus.KK498671.1                              6516065  8 +  28682327 GGAT-TGAC---------
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  6364 12 -     20643 AGAG-AAAAT-G---A-A
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             25899 12 -     33872 AGAG-AAAAT-G---A-A
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1525878  1 -   2331223 G-----------------
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                139806  7 -    281493 AGAC-CGA----------
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       128117 12 -    134049 GGAG-TGAAT-G---A-A
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        215544  8 -    227762 GGAT-TGAC---------
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     17658 12 -     20485 GGAG-GAAAT-G---A-G
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           8347  8 -      8775 GGAG-CGAC---------
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Ochotona_princeps.JH802095.1                            4996729 2205 -  23139505 I
e Spilogale_gracilis.SpiGra_flattened_line_905             236262 1976 -    276980 I
e Procavia_capensis.ProCapCap_scaffold_149274                2467 1156 -      9567 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Megaderma_lyra.MegLyr_scaffold_3562                       64783 239 -    234502 I
e Heterohyrax_brucei.HetBruBak_scaffold_25354               61360 1157 +     73687 I
e Echinops_telfairi.JH980316.1                           22999931  2 -  44670279 I
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1008 325 -      5782 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19677 266 -    119109 I
e Galeopterus_variegatus.GalVar_scaffold_354               157483 1695 +    324696 I
e Tarsius_wallacei.k141_48636                               60532 3805 +     65473 I
e Tarsius_lariang.k141_609102                               27216 3812 +     42269 I
e Rattus_norvegicus.chr11                                13915860 1475 +  90463843 I
e Nannospalax_galili.KL201303.1                            119252 614 +    362372 I
e Mus_spretus.CM004110.1                                 74333573 2703 +  97876770 I
e Mus_pahari.LT608305.1                                  67557037 2889 +  89017189 I
e Mus_musculus.chr16                                     75490838 2711 +  98207768 I
e Mus_caroli.LT608236.1                                  70767758 3738 +  92629107 I
e Dolichotis_patagonum.DolPat_scaffold_14102                36772 276 -     73477 I
e Dasyprocta_punctata.DasPun_flattened_line_634             59553 276 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                18462 277 +     26546 I
e Ctenodactylus_gundi.CteGun_scaffold_447                  209506 3013 -    956709 I
e Cephalopachus_bancanus.k141_702587                         8788 3391 +     21754 I
e Cavia_tschudii.CavTsc_scaffold_488                       177453 271 +    436027 I
e Cavia_porcellus.DS562889.1                             15799262 290 -  24440124 I
e Cavia_aperea.AVPZ01000278.1                            15787326 288 -  24422027 I
e Castor_canadensis.CasCan_scaffold_47037                   32333  6 +     33760 I
e Carlito_syrichta.NW_007248099.1                          309764 3411 +    345090 I
e Pan_paniscus.CM003386.1                               127575888 480 - 205426864 I
e Pan_troglodytes.CM009241.2                            120153042 480 - 196562556 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               15219 20 +    209709 TGGATA------T-TTGTCT-AGA-T--GAG
s Acinonyx_jubatus.LLWD01000356.1                         2035235 19 +   3721120 -TGATT------T-GGGTCC-AGA-T--GAA
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    115095 14 -    189883 ATGACA------C-TAATTC-A---------
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 I 2323
s Ailuropoda_melanoleuca.LNAT01000321.1                  10658802 19 +  23371972 -TGATT------T-TGGTCC-TGA-T--GAG
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7095937 19 -  16596857 -TGATA------T-TGGTCC-AAA-T--GAG
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   19493 19 -     22067 CTGAAA------T-TAGTCC-AGA-T--AA-
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   2949 20 -     60446 TGGATA------T-TTGTCC-AGA-T--GAA
i Allenopithecus_nigroviridis.k141_2469532              I 4 C 0
s Allochrocebus_lhoesti.k141_3566948                         3666 20 -     29318 TGGATA------T-TTGTCC-AGA-T--GAA
i Allochrocebus_lhoesti.k141_3566948                    I 4 C 0
s Allochrocebus_preussi.k141_1108977                         2602 20 +     38766 TGGATA------T-TTGTCC-AGA-T--GAA
i Allochrocebus_preussi.k141_1108977                    I 4 C 0
s Allochrocebus_solatus.k141_371672                          3560 20 -     80423 TGGATA------T-TTGTCC-AGA-T--GAA
i Allochrocebus_solatus.k141_371672                     I 4 C 0
s Alouatta_belzebul.k141_1818029                            11547 20 -     18050 CAGATA------T-TGGTCC-AGA-T--GAG
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_1710068                               1263 20 +      1555 CAGATA------T-TGGTCC-AGA-T--GAG
i Alouatta_caraya.k141_1710068                          C 0 C 0
s Alouatta_discolor.k141_811576                             12220 20 -     21359 CAGATA------T-TGGTCC-AGA-T--GAG
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                1843 20 +      2129 CAGATA------T-TGGTCC-AGA-T--GAG
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_2177643                          1220 20 -      1868 CAGATA------T-TGGTCC-AGA-T--GAG
i Alouatta_macconnelli.k141_2177643                     C 0 C 0
s Alouatta_nigerrima.k141_3537692                            1269 20 +      1660 CAGATA------T-TGGTCC-AGA-T--GAG
i Alouatta_nigerrima.k141_3537692                       C 0 C 0
s Alouatta_palliata.k141_2764429                             1189 20 -      1480 CAGATA------T-TGGTCC-AGA-T--GAG
i Alouatta_palliata.k141_2764429                        C 0 C 0
s Alouatta_puruensis.k141_131505                              476 20 +      4855 CAGATA------T-TGGTCC-AGA-T--GAG
i Alouatta_puruensis.k141_131505                        C 0 C 0
s Alouatta_seniculus.k141_1531728                            1404 20 -      1692 CAGATA------T-TGGTCC-AGA-T--GAG
i Alouatta_seniculus.k141_1531728                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3521659 19 +   4113121 -TGAAT------T-TGGTCC-AGA-T--GAG
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      391763 13 -    631301 --------------TGGTCC-AAA-T--GAG
i Anoura_caudifer.AnoCau_scaffold_422                   I 6 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            32239 19 +     33004 -TGAAT------T-TGGTCC-AGA-T--GAG
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 63889 20 +     78111 TGGACA------T-TGGTCC-AGA-T--GAG
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            6832 20 +     22701 TGGACA------T-TGGTCC-AGA-T--GAG
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5750789 20 +   9889416 TGGACA------T-TGGTCC-AGA-T--GAG
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             7378 20 -    104377 TGGACA------T-TGGTCC-AGA-T--GAG
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               7380 20 +     23246 TGGACA------T-TGGTCC-AGA-T--GAG
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_231055                     1268 20 -      2492 CCGAAA------T-TAATCT-AGA-T--GAG
i Aplodontia_rufa.AprRuf_scaffold_231055                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        2179 20 +      9265 CTGAAG------T-TGGTCC-AGA-T--GAG
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                10181 13 -     29036 --------------TGCTCC-AAA-T--GAG
i Artibeus_jamaicensis.ArtJam_scaffold_41619            I 6 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9540656 20 +  39197703 CGGATA------T-TGGTCC-AGA-T--GAG
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             61929 20 +     85812 CGGATA------T-TGGTCC-AGA-T--GAG
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                12942 20 +     89302 CGGATA------T-TGGTCC-AGA-T--GAG
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             17443 20 -     58268 CGGATA------T-TGGTCC-AGA-T--GAG
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             65437 20 +    119057 CGGATA------T-TGGTCC-AGA-T--GAG
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               7406 20 -     25888 CGGATA------T-TGGTCC-AGA-T--GAG
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 7911 20 -     16375 CTGAAA------T-TGGTCC-AGA-T--GAG
i Avahi_laniger.k141_2840928                            C 0 I 7
s Avahi_peyrierasi.k141_798820                               1527 20 +      6337 CTGAAA------T-TGGTCC-AGA-T--GAG
i Avahi_peyrierasi.k141_798820                          C 0 I 7
s Balaenoptera_acutorostrata.KI537095.1                  26381630 19 +  51448160 -TGAAT------T-TGGTCC-AGA-T--GAG
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        6803 19 -     13118 -TGAAT------T-TGGTCC-AGA-T--GAG
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   44764 19 -     72089 -TGAAT------T-TGGTCC-AGA-T--GAG
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6561386 19 +   6870073 -TGAAT------T-TGGTCC-AGA-T--GAG
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138141508 19 - 161108492 -TGAAT------T-TGGTCC-AGC-T--GAG
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     574038 19 -    998990 -TGAAT------T-TGGTCC-AGA-T--GAG
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136297241 19 - 158972876 -TGAAT------T-TGGTCC-AGC-T--GAG
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1234322 19 -   1914593 -TGAAT------T-TGGTCC-AGA-T--GAG
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               115290 20 -    171031 TGGATA------T-TGGTCC-AGA-T--GAG
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 14319 20 +    125063 TGGATA------T-TGGTCC-AGA-T--GAG
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                16362 20 -    216513 TGGATA------T-TGGTCC-AGA-T--GAG
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        8905 20 -    134917 TGGATA------T-TGGTCC-AGA-T--GAG
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3220774 17 -   8989139 ---AAT------T-TGGTCC-AGA-T--GAG
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           398475 17 -  15254737 ---AAT------T-TGGTCC-AGA-T--GAG
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2974211 17 +   6889770 ---AAT------T-TGGTCC-AGA-T--GAG
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11520976 16 +  39901454 ----TT------T-GGGCCA-GGA-T--AAG
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   16001 16 +     87036 ----TT------T-GGGCCA-GGA-T--AAG
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11267645 16 -  35597290 ----TT------T-GGGCCA-GGA-T--AAG
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11090178 16 +  39895921 ----TT------T-GGGCCA-GGA-T--AAG
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16457191 16 -  44759192 ----TT------T-GGGCCA-GGA-T--AAG
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21326720 19 + 157394656 -TGAAT------T-TGGTCC-AGA-T--GAG
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135707937 19 - 157403528 -TGAAT------T-TGGTCC-AGA-T--GAG
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_790727                    52 20 -      1550 CTAAAA------T-TAGTCT-AA-CA--AAG
i Capromys_pilorides.CapPil_scaffold_790727             C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               60968 13 +     67245 --------------TGCTCC-GAG-T--GAG
i Carollia_perspicillata.CarPer_scaffold_4436           I 6 C 0
s Castor_canadensis.CasCan_scaffold_47037                   32339  1 +     33760 ---------------G---------------
i Castor_canadensis.CasCan_scaffold_47037               I 6 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   160383 19 -    276539 -TGAAT------T-TGGTCC-AGA-T--GAG
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18892130 20 -  29618158 TGGATA------T-TGGTCC-AGA-T--GAG
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 9674 20 -     26817 TGGATA------T-TGGTCC-AGA-T--GAG
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                13917 20 +     25043 TGGATA------T-TGGTCC-AGA-T--GAG
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4365155 19 +   7569818 -TGATC------T-TGGTCC-AGA-T--GAG
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         4912 19 -      9338 -TGATC------T-TGGTCC-AGA-T--GAG
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6556892 20 +   6739814 tggata------t-ttGTCC-AGA-T--GAG
i Cercocebus_atys.KQ010443.1                            I 5 C 0
s Cercocebus_chrysogaster.k141_2328246                      28366 20 +     60454 TGGATA------T-TTGTCC-AGA-T--GAG
i Cercocebus_chrysogaster.k141_2328246                  I 5 C 0
s Cercocebus_lunulatus.k141_4634644                          3573 20 -     21101 TGGATA------T-TTGTCC-AGA-T--GAG
i Cercocebus_lunulatus.k141_4634644                     I 5 C 0
s Cercocebus_torquatus.k141_3969582                         60883 20 -    107033 TGGATA------T-TTGTCC-AGA-T--GAG
i Cercocebus_torquatus.k141_3969582                     I 5 C 0
s Cercopithecus_ascanius.k141_4123525                        3766 20 -     17608 TGGATA------T-TTGTCC-ACA-T--GAG
i Cercopithecus_ascanius.k141_4123525                   I 4 C 0
s Cercopithecus_cephus.k141_3893260                           925 20 +     45019 TGGGTA------T-TTGTCC-AGA-T--GAG
i Cercopithecus_cephus.k141_3893260                     I 4 C 0
s Cercopithecus_diana.k141_2561715                           1009 20 +     15177 TGGATA------T-TTGTCC-AGA-T--GAG
i Cercopithecus_diana.k141_2561715                      I 4 C 0
s Cercopithecus_hamlyni.k141_129805                          3809 20 +     16677 TGGGTA------T-TTGTCC-AGA-T--GAG
i Cercopithecus_hamlyni.k141_129805                     I 4 C 0
s Cercopithecus_lowei.k141_623764                           25979 20 +     35983 TGGAGA------T-TTGTCC-AGA-T--GAG
i Cercopithecus_lowei.k141_623764                       I 4 C 0
s Cercopithecus_albogularis.ctg51                              11992507 20 +  12117833 TGGAGA------T-TTGTCC-AGA-T--GAG
i Cercopithecus_albogularis.ctg51                             I 4 C 0
s Cercopithecus_mona.ctg12                               46479265 20 +  46592721 TGGAGA------T-TTGTCC-AGA-T--GAG
i Cercopithecus_mona.ctg12                              I 4 C 0
s Cercopithecus_neglectus.k141_2078027                      42819 20 -     45581 TGGATA------T-TTGTCC-AGA-T--GAG
i Cercopithecus_neglectus.k141_2078027                  I 4 C 0
s Cercopithecus_nictitans.k141_1129315                       3821 20 +     35577 TGGAGA------T-TTGTCC-AGA-T--GAG
i Cercopithecus_nictitans.k141_1129315                  I 4 C 0
s Cercopithecus_petaurista.k141_64532                        3594 20 -     25661 TGGATA------T-TTGTCC-AGA-T--GAG
i Cercopithecus_petaurista.k141_64532                   I 4 C 0
s Cercopithecus_pogonias.k141_3109732                        3573 20 -     17744 TGGAGA------T-TTGTCC-AGA-T--GAG
i Cercopithecus_pogonias.k141_3109732                   I 4 C 0
s Cercopithecus_roloway.k141_2263608                        23179 20 +     37128 TGGATA------T-TTGCCC-AGA-T--GAG
i Cercopithecus_roloway.k141_2263608                    I 4 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           3996 20 -      6963 TTGAAT------T-TGGTCT-AGA-T--GAG
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           60183 20 -     68416 CTGAAA------T-TCGTCC-AGA-C--GAG
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            9235 20 +     13308 CTGAAA------T-TCGTCC-AGA-T--GAG
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             6947 20 -     18223 TGGATA------T-TGGTCC-AGA-T--GAG
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             23965 20 +     25473 TGGATA------T-TGGTCC-AGA-T--GAG
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           43005 20 +     57117 TGGATA------T-TGGTCC-AGA-T--GAG
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          47684 20 +     54541 TGGATA------T-TGGTCC-AGA-T--GAG
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15962961 20 +  43084221 CTTAAA------T-TAGTCT-AA-CA--AAG
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         72487 20 +    196370 TGGATA------T-TGGTCC-AGA-T--GAG
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          16667 20 +     40510 TGGATA------T-TGGTCC-AGA-T--GAG
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15141176 20 -  15256731 TGGATA------T-TTGTCC-AGA-T--GAA
i Chlorocebus_aethiops.ctg22                            I 4 C 0
s Chlorocebus_pygerythrus.k141_1486215                      35785 20 -     53260 TGGATA------T-TTGTCC-AGA-T--GAA
i Chlorocebus_pygerythrus.k141_1486215                  I 4 C 0
s Chlorocebus_sabaeus.CM001963.2                        101146344 20 + 101219884 tggata------t-tTGTCC-AGA-T--GAA
i Chlorocebus_sabaeus.CM001963.2                        I 4 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                17765 17 -     21363 TTGAAT------T-GAGTTC-AGT-T-----
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           763070 17 +    964067 TTGAAT------T-GAGTTC-AAT-T-----
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10888329 20 +  10971483 TGGACA------T-TTGTCC-AGA-T--GAG
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147666257 20 + 156195979 TGGACA------T-TTGTCC-AGA-T--GAG
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            18240 20 +     23629 TGGACA------T-TTGTCC-AGA-T--GAG
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60620817 19 +  78930452 -tgatt------t-tggtCC-AGA-T--AAC
i Condylura_cristata.JH655880.1                         I 1 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 279609 14 -    399297 CTGACA------T-TAACTC-A---------
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 I 2673
s Cricetulus_griseus.LT883672.1                          53031713 14 +  72327488 CTGACA------T-TAATTC-A---------
i Cricetulus_griseus.LT883672.1                         C 0 I 2939
s Crocidura_indochinensis.CroInd_scaffold_848148              789 17 +      1327 ---GAG------T-TCGGCC-AGA-T--GAA
i Crocidura_indochinensis.CroInd_scaffold_848148        I 2 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            53292 19 -     70449 -TGATT------T-GGGTTC-AGA-T--GAT
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 32318 20 -     67205 CTAAAA------T-TAGTCT-AA-CA--AAG
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          184868 20 -   6883506 CTGAAT------T-TGGCCT-AGA-T--GAG
i Dasypus_novemcinctus.JH568778.1                       I 1 C 0
s Daubentonia_madagascariensis.ctg11                     16846048 20 +  31942871 CTGAAA------C-TGGTCC-AGA-T--GAG
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80038253 19 -  96802777 -TGAAT------T-TGGTCC-AGA-T--GAG
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18700258 13 -  18957592 --------------TGGTCC-AAC-T--GCG
i Desmodus_rotundus.KZ672188.1                          I 5 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 323807 19 +    993696 -TGATC------T-TGGTCC-AGA-T--GAG
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   4444 19 +    151128 -TGATC------T-TGGTCC-AGA-T--GAG
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   158158 20 +    228994 CTGAAA------T-TAGCCT-AA-CA--AAG
i Dinomys_branickii.DinBra_scaffold_1996                I 2 C 0
s Dipodomys_ordii.KN672545.1                              3659421  8 +   4240102 ctggAA------T-A----------------
i Dipodomys_ordii.KN672545.1                            C 0 I 30
s Dipodomys_stephensi.DipSte_scaffold_84338                  1781  8 -     11986 CTGGAA------T-A----------------
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 I 28
s Eidolon_helvum.KE772537.1                                 13526 19 +     24177 -TGAAT------T-CAATCC-AGA-T--AAG
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1492989 19 +   1727528 -TGAAT------T-TGGTCC-AGA-T--GAG
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7829982 21 +  15467074 CTGAAT------TTCTGTCT-AGA-T--GAG
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        240689 14 -    369425 CTGACA------c-taattc-a---------
i Ellobius_lutescens.LOEQ01003611.1                     C 0 I 2767
s Ellobius_talpinus.LOJH01204657.1                            123 14 +      1708 CTGACA------C-TGATTC-A---------
i Ellobius_talpinus.LOJH01204657.1                      C 0 N 0
s Enhydra_lutris.KZ291749.1                              85873375 19 +  99434291 -TGATT------T-TGGTCC-AGA-T--GAG
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4708209 16 +   6522550 ----at------t-tggCCC-AAA-T--GAC
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5854445 17 -   7175178 -TGATC------T-TGGTCT---A-T--GAG
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13352945 17 +  41866177 -TGATC------T-TGGTCT---A-T--GAG
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          14435 17 +     92910 -TGATC------T-TGGTCT---A-T--GAG
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11641723 19 +  16010500 -TCAAC------T-TTGTCC-ACA-G--GAA
i Erinaceus_europaeus.JH835290.1                        I 1 C 0
s Erythrocebus_patas.Contig8                             48778355 20 -  48907691 TGGATA------T-TTGTCC-AGA-T--GAA
i Erythrocebus_patas.Contig8                            I 4 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          316471 19 +    330699 -TGAAT------T-TGGTCC-AGA-T--GAG
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             62925 19 +     89355 -TGAAT------T-TGGTCC-AGA-T--GAG
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              6222 20 +     13586 CTGAAA------T-TGGTCC-AGA-T--GAG
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               6154 20 -      6809 CTGAAA------T-TGGTCC-AGA-T--GAG
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            12628 20 +     36558 CTGAAA------T-TGGTCC-AGA-T--GAG
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             8945 20 +     60246 CTGAAA------T-TGGTCC-AGA-T--GAG
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                12427 20 +    109717 CTGAAA------T-TGGTCC-AGA-T--GAG
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                  412 20 -     19505 CTGAAA------T-TGGTCC-AGA-T--GAG
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                17087 20 +     27497 CTGAAA------T-TGGTCC-AGA-T--GAG
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           19543 20 +     26808 CTGAAA------T-TGGTCC-AGA-T--GAG
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                34281 20 +     46535 CTGAAA------T-TGGTCC-AGA-T--GAG
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              17007 20 -     29447 CTGAAA------T-TGGTCC-AGA-T--GAG
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129894207 19 - 159252932 -TGATT------T-GGGTCC-AGA-T--GAA
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129281291 19 - 158578461 -TGATT------T-GGGTCC-AGA-T--GAA
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 22429 19 +     52776 -TGATT------T-GGGTCC-AGA-T--GAA
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13892623 19 -  19261668 CTGAAA------T-CAGTCT-AT--A--TAG
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     212085 20 -    847004 CTGAAA------T-TGGTCC-AGG-T--GAG
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           14456 20 -     43889 CTGAAA------T-TGGTCC-AGG-T--GAG
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          11524 20 +     27357 TTGAAA------T-TGGTCC-AGG-T--GAG
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    182785 18 -    189561 --GAAT------T-TGGTCC-AGA-T--GAG
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           15029 20 -     18683 CTGAAA------T-TAATCC-AGA-C--AAG
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               6933 20 -     14630 TGGATA------T-TTGTCC-AGA-T--GAG
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119654033 20 - 195582420 tggata------t-ttGTCC-AGA-T--GAG
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   78441 20 +    118900 CTGAAA------T-CTATCC-AGA-C--CAG
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         3012 20 +     10286 CTGAAA------T-TGGTCC-AGA-T--GAG
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             1492 20 -     11661 CTGAAA------T-TGGTCC-AGA-T--GAG
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             6818 20 +     56096 CTGAAA------T-TGGTCC-AGA-T--GAG
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        30067 20 -     42470 CTGAAA------T-TGGTCC-AGA-T--GAG
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        46695 20 -     54384 CTGAAA------T-TGGTCC-AGA-T--GAG
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              18487 19 +     53719 -TGATT------T-GGGTTC-AGA-T--GAA
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                29008 19 -     91191 -TGAAT------T-TGCTCC-AGA-T--GAG
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2552342 20 +  31725842 CTGAAA------T-TAGTCT-AA--A-TGAG
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              148343 19 +    277961 -TGATT------T-TTGTCA-AGA-T--GAG
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      279658 19 -    477199 -TGAAT------C-TGACCC-AGA-T--GAG
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_345408               655 19 -       919 -TGAAT------C-TGACCC-AGA-T--GAG
i Hipposideros_galeritus.HipGal_scaffold_345408         C 0 C 0
s Hoolock_leuconedys.ctg79                                      6623 20 -   7690867 TGGATA------T-TTGTCC-AGA-T--GAG
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 18557 19 -     67322 -TGATT------T-GGGTCC-AGA-A--GAA
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hylobates_abbotti.k141_164775                              1406 20 -      2073 TGGATA------T-TTGTCC-AGA-T--GAG
i Hylobates_abbotti.k141_164775                         C 0 C 0
s Hylobates_agilis.k141_1362131                               415 20 +      1075 TGGATA------T-TTGTCC-AGA-T--GAG
i Hylobates_agilis.k141_1362131                         C 0 I 31
s Hylobates_klossii.k141_183401                               959 20 -      1272 TGGATA------T-TTGTCC-AGA-T--GAG
i Hylobates_klossii.k141_183401                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14626311 20 -  25970782 TGGATA------T-TTGTCC-AGA-T--GAG
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_950183                             1007 20 +      2027 TGGATA------T-TTGTCC-AGA-T--GAG
i Hylobates_muelleri.k141_950183                        C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             35471 20 -     60944 TGGATA------T-TTGTCC-AGA-T--GAG
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     7414 23 +     22540 CTGAAA---TATT-TACTCT-TAA-T--AAG
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7127258 20 +  13083262 CTGAAA------T-TAATCC-AAA-T--GAG
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_5141390                                   1544 20 -      3181 CTGAAA------T-TGGTCC-AGA-T--GAG
i Indri_indri.k141_5141390                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              10460 19 +     17520 -TGAAT------T-TGGTCC-AGA-T--GAG
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH727545.1                                 2440 19 -      4668 CTGAAA------T-TAATCC-AGA-T--AA-
i Jaculus_jaculus.JH727545.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               25063 19 +     37189 -TGAAT------T-TGGTCC-AGA-T--GAG
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          51527 20 -    147782 CGGATA------T-TGGTCC-AGA-T--GAG
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    4878  4 +     26176 ----AT------T-T----------------
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 I 159
s Lemur_catta.scaffold_1                                258408370 20 - 285822530 CTGAAA------T-TGGTCC-AGA-T--GAG
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        25121 20 +     39228 CCGAAA------T-TGGTCC-AGA-T--AAG
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            54507 20 +     63517 CTGAAA------T-TGGTCC-AGA-T--AAG
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        79769 20 +    116806 CCGAAA------T-TGGTCC-AGA-T--AAG
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     32760 20 -     33031 CTGAAA------T-TGGTCC-AGA-T--AAG
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3087238 19 -   3498232 -TGATT------T-TGGTCC-AGA-T--GAG
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    14896 18 +     22452 CTGAAA------T-TAGTCT-A---T--GAG
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            137416 19 +   3060487 -TGAAT------T-TGGTCC-AGA-T--GAG
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19249973 20 +  19376315 TGGATA------T-TTGTCC-AGA-T--GAG
i Lophocebus_aterrimus.ctg55                            I 4 C 0
s Loris_lydekkerianus.k141_550999                           11807 20 +     84689 CTGAAA------T-TGGTCC-AGA-T--GAG
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3779556 20 +   6799190 CTGAAA------T-TGGTCC-AGA-T--GAG
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20596393 21 -  62548349 CTGAAT------TTTTGTCC-AGA-T--GAG
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11089634 16 +  39895028 ----TT------T-GGGCCA-GGA-T--AAG
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             21730 20 +     74745 TGGATA------T-TTGTCC-AGA-T--GAG
i Macaca_arctoides.k141_2201161                         I 4 C 0
s Macaca_assamensis.Contig65                             12708190 20 +  12821369 TGGATA------T-TTGTCC-AGA-T--GAG
i Macaca_assamensis.Contig65                            I 4 C 0
s Macaca_cyclopis.k119_883699                                 768 20 -     26467 TGGATA------T-TTGTCC-AGA-T--GAG
i Macaca_cyclopis.k119_883699                           I 4 C 0
s Macaca_fascicularis.k141_155037                           48635 20 +     63263 TGGATA------T-TTGTCC-AGA-T--GAG
i Macaca_fascicularis.k141_155037                       I 4 C 0
s Macaca_fuscata.k119_938422                                  745 20 -     26361 TGGATA------T-TTGTCC-AGA-T--GAG
i Macaca_fuscata.k119_938422                            I 4 C 0
s Macaca_leonina.k141_467472                                 3922 20 -      7381 TGGATA------T-TTGTCC-AGA-T--GAG
i Macaca_leonina.k141_467472                            I 4 C 0
s Macaca_maura.k141_251854                                  47160 20 -     79256 TGGATA------T-TTGTCC-AGA-T--GAG
i Macaca_maura.k141_251854                              I 4 C 0
s Macaca_mulatta.NC_041755.1                            196037262 20 + 196197964 tggata------t-tTGTCC-AGA-T--GAG
i Macaca_mulatta.NC_041755.1                            I 4 C 0
s Macaca_nemestrina.KQ004885.1                           11447428 20 +  11645122 tggata------t-tTGTCC-AGA-T--GAG
i Macaca_nemestrina.KQ004885.1                          I 4 C 0
s Macaca_nigra.k141_282495                                   6114 20 -     46448 TGGATA------T-TTGTCC-AGA-T--GAG
i Macaca_nigra.k141_282495                              I 4 C 0
s Macaca_radiata.k141_3680256                                3780 20 -     13212 TGGATA------T-TTGTCC-AGA-T--GAG
i Macaca_radiata.k141_3680256                           I 4 C 0
s Macaca_siberu.k141_741907                                 17457 20 -     55006 TGGATA------T-TTGTCC-AGA-T--GAG
i Macaca_siberu.k141_741907                             I 4 C 0
s Macaca_silenus.Contig12                                43842563 20 +  43892939 TGGATA------T-TTGTCC-AGA-T--GAG
i Macaca_silenus.Contig12                               I 4 C 0
s Macaca_thibetana.k99_662710                               18744 20 -     24607 TGGATA------T-TTGTCC-AGA-T--GAG
i Macaca_thibetana.k99_662710                           I 4 C 0
s Macaca_tonkeana.k141_2870633                               6111 20 -     27140 TGGATA------T-TTGTCC-AGA-T--GAG
i Macaca_tonkeana.k141_2870633                          I 4 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                702242 19 +    802869 -TGAAT------T-CCATCC-AGA-T--AAG
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43439141 20 -  43563597 TGGATA------T-TTGTCC-AGA-T--GAG
i Mandrillus_leucophaeus.scaffold125                    I 5 C 0
s Mandrillus_sphinx.Contig144                             4451955 20 -   4543643 TGGATA------T-TTGTCC-AGA-T--GAG
i Mandrillus_sphinx.Contig144                           I 5 C 0
s Manis_javanica.JSZB01003966.1                            147311 19 +    252755 -tgatt------t-tggtcc-aag-t--gag
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             37454 19 +     58827 -tgatt------t-tggtcc-aag-t--gag
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36875166 20 +  64221397 CTGAAA------T-TAATCC-AAA-T--GAG
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             2274 19 -     87323 -TGATT------T-TGGTCT-GGA-T--GAG
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               14621 14 +     15977 CTGACA------T-TAATTC-A---------
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 I 934
s Mesocricetus_auratus.KB708139.1                         1048309 14 -  26018355 CTGACA------C-TAATTC-A---------
i Mesocricetus_auratus.KB708139.1                       C 0 I 2868
s Mesoplodon_bidens.MesBid_scaffold_96348                      47 19 -     12939 -TGAAT------T-TGGTCC-AGA-T--GAG
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16511404 20 +  47401472 ctaaaa------t-tcATCC-AGA-T--GAG
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  39569 20 -     48017 CA-CAT------GCTCGGCC-AGG-T--AAG
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               24135 13 -     32043 --------------GGGTCC-AAA-T--GAG
i Micronycteris_hirsuta.MicHir_scaffold_37978           I 6 C 0
s Microtus_ochrogaster.CM001673.1                        22821059 14 -  98408828 CTGACA------C-TAATTC-A---------
i Microtus_ochrogaster.CM001673.1                       C 0 I 2807
s Miniopterus_natalensis.LDJU01000022.1                   8212249 19 +  10048721 -AAAAT------T-TGGTCC-CAA-T--GAG
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            36738 19 +     45743 -AAAAT------T-TGGTCC-CAA-T--GAG
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         3706 20 +     29742 TGGATA------T-TTGTCC-AGA-T--AAG
i Miopithecus_ogouensis.k141_2935907                    I 4 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        12765 19 -    104932 -TGATT------T-TGGTCC-AGA-T--GGG
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     6793 20 +      8497 CTAAAA------T-TCATCC-AGA-T--GAG
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 147843 19 +    154973 -TGAAT------T-TGGTCC-AGA-T--GAG
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                162682 13 +    265003 --------------TGGGCC-AAA-T--GAG
i Mormoops_blainvillei.MorMeg_scaffold_2952             I 6 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  3032 19 -     19904 -TGAAT------T-TGGTCC-AGA-T--GAG
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  146186 19 -    168139 -TGATT------T-GGGTTC-AGA-T--GAA
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          23684 16 -    100666 ----AT------T-TGGCCC-AAA-T--GAG
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             13540 20 +     98495 CTGAAA------T-TAATCC-AAA-C--AAG
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4425639 19 -  28371801 -TGATT------T-GGGTCC-AGA-T--GAG
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     91644 20 -    117718 CTAAAA------T-TAGGCT-AA-CA--AAG
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               970549 16 +   8389877 ----GT------T-TGGCCC-AAA-T--GAG
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5021974 16 +   6462685 ----AT------T-TGGCCC-AAA-G--GAG
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3468052 16 -   3747815 ----GT------T-TGGCCC-AAA-T--GAG
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        13295 16 +     66751 ----AT------T-TGGCCC-AAA-T--GAG
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             6308 20 -      8794 TTGAAT------T-TAGTCC-ATA-T--GAG
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nasalis_larvatus.k141_153429                              10179 20 +     48152 TGGACA------T-TTGTCC-AGA-T--GAG
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4486155 19 -  14209539 -TGATT------T-TGGTCC-AGA-T--GGG
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3952455 19 -   4490290 -TGAAT------T-TGGTCC-AGA-T--GAG
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Nomascus_annamensis.k141_224620                             777 20 -      2316 TGGATA------T-TTGTCC-AGA-T--GAG
i Nomascus_annamensis.k141_224620                       C 0 C 0
s Nomascus_concolor.k141_226614                              2874 20 -      5092 TGGATA------T-TTGTCC-AGA-T--GAG
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_1032971                            444 20 -      1918 TGGATA------T-TTGTCC-AGA-T--GAG
i Nomascus_gabriellae.k141_1032971                      C 0 C 0
s Nomascus_siki_b.tarseq_80                             26626 20 -  18771707 TGGATA------T-TTGTCC-AGA-T--GAG
i Nomascus_siki_b.tarseq_80                         I 12 C 0
s Nomascus_siki_a.k141_595747                                  4296 20 +      4512 TGGATA------T-TTGTCC-AGA-T--GAG
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                32418 16 +   3668941 ----TT------T-GGGCCA-GGA-T--AAG
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65568261 20 -  95554990 CTGAAA------T-TGGTCC-AGA-T--GAG
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            4987 20 +      6470 CTGAAA------T-TGGTCC-AGA-T--GAG
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65670594 20 +  89412551 CTGAAA------T-TGGTCC-AGA-T--GAG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Octodon_degus.JH651621.1                                3687144 20 +  10294119 CTAAAA------T-TAGTCT-AA-CA--AAG
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             680817 19 -   3126709 -TGATT------T-TGGTCC-AGA-T--GAG
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1081208 19 +   1425656 -TGAAT------T-TGGTCC-AGA-T--GAG
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         38511 19 +     78940 -TGAAT------T-TGGTCC-AGA-T--GAG
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  126324 14 +    145789 CTGACA------C-TAATTC-A---------
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 I 3732
s Onychomys_torridus.OnyTor_scaffold_12578                  38512 14 +     62360 CTGACA------C-CAATTC-A---------
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 I 4229
s Orcinus_orca.KB316965.1                                 7226140 19 -   7562323 -TGAAT------T-TGGTCC-AGA-T--GAG
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              61263 21 -     66828 TTGAAT------TTTTGTTC-AGA-T--GAG
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 I 80
s Oryctolagus_cuniculus.CM000803.1                      141877929 20 + 163896628 CTGAAA------T-TAGTCT-A---TGTGAG
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      309711 16 -    505867 ----TT------T-GGGCCA-GGA-T--AAG
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        1900 20 -     53940 CTGAAA------T-TGGTCC-AGG-T--GAG
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18009881 20 -  38779656 CTGAAA------T-TGGTCC-AGG-T--GAG
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134078800 19 - 275406953 -TGAAT------T-TGCTCC-AGA-T--GAG
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      80014 19 +    140051 -TGAAT------T-TGCTCC-AGA-T--GAG
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  35574 19 +    295523 -TGATT------T-GGGTCC-AGA-T--GAA
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3639324 19 +  18214204 -TGATT------T-GGGTCC-AGA-T--GAA
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5029000 19 -   6340057 -TGATT------T-GGGTCC-AGA-T--GAA
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1067659 19 -   1292953 -TGAAT------T-TGGTCC-AGA-T--GAG
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188157939 20 - 188283584 TGGATA------T-TTGTCC-AGA-T--GAG
i Papio_anubis.CM001492.2                               I 4 C 0
s Papio_cynocephalus.k141_45376                              1031 20 +     25005 TGGATA------T-TTGTCC-AGA-T--GAG
i Papio_cynocephalus.k141_45376                         I 4 C 0
s Papio_hamadryas.Contig15                               47515316 20 +  47705337 TGGATA------T-TTGTCC-AGA-T--GAG
i Papio_hamadryas.Contig15                              I 4 C 0
s Papio_kindae.k141_5458022                                 69306 20 -    104429 TGGATA------T-TTGTCC-AGA-T--GAG
i Papio_kindae.k141_5458022                             I 4 C 0
s Papio_papio.k141_979496                                    7835 20 +     14967 TGGATA------T-TTGTCC-AGA-T--GAG
i Papio_papio.k141_979496                               I 4 C 0
s Papio_ursinus.k141_1345919                                 3700 20 -      7628 TGGATA------T-TTGTCC-AGA-T--GAG
i Papio_ursinus.k141_1345919                            I 4 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    117064 19 -    135482 -TGATT------T-AGGTCC-AGA-T--GAA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           6584 20 -     23713 CTGAAA------T-TGGTCC-AGA-T--GAG
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            25898 20 -     27972 CTGAAA------T-TGGTCC-AGA-T--GAG
i Perodicticus_potto.k141_713187                        C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       1600 14 +     49596 ctggaatcttgct-a----------------
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 I 38
s Peromyscus_maniculatus.KI615518.1                       4951892 14 -   8017169 CTGACA------C-taattc-a---------
i Peromyscus_maniculatus.KI615518.1                     C 0 I 3218
s Petromus_typicus.PetTyp_scaffold_33007                    14848 19 -     36578 CAAAAA------T-GAGTCT-AA--A--GAG
i Petromus_typicus.PetTyp_scaffold_33007                I 1 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071               598 19 +      8220 -TGAAT------T-TGGTCC-AGA-T--GAG
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Piliocolobus_badius.k141_1987485                           3712 20 -      5908 TGGATA------T-TTGTCC-AGA-T--GAG
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       4330 20 -     17985 TGGATA------T-TTGTCC-AGA-T--GAG
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            3697 20 +      7694 TGGATA------T-TTGTCC-AGA-T--GAG
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26742181 20 +  26888534 tggata------t-ttGTCC-AGA-T--GAG
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pithecia_albicans.k141_991845                             45129 20 -     61926 TGGATA------T-TGGTCC-AGA-T--GAG
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        26512 20 +     78826 TGGATA------T-TGGTCC-AGA-T--GAG
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                             10560 20 -     15800 TGGATA------T-TGGTCC-AGA-T--GAG
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        13759 20 -     16101 TGGATA------T-TGGTCC-AGA-T--GAG
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          6988 20 +      9673 TGGATA------T-TGGTCC-AGA-T--GAG
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13475988 20 -  19735023 TGGATA------T-TGGTCC-AGA-T--GAG
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           14891 20 -     31692 TGGATA------T-TGGTCC-AGA-T--GAG
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           7060 19 +     21690 -TGAAT------T-TGGTCC-AGA-T--GAG
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       24226 20 +     44506 TGGATA------T-TGGTCC-AGA-T--GAG
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        24439 20 +     67491 TGGATA------T-TGGTCC-AGA-T--GAG
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      14678 20 -     98129 TGGATA------T-TGGTCC-AGA-T--GAG
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     24278 20 +    147771 TGGATA------T-TGGTCC-AGA-T--GAG
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                          914 20 -     43940 TGGATA------T-TGGTCC-AGA-T--GAG
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          4997 20 -     55515 TGGATA------T-TGGTCC-AGA-T--GAG
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         24351 20 +    152463 TGGATA------T-TGGTCC-AGA-T--GAG
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       2068 20 -    119457 TGGATA------T-TGGTCC-AGA-T--GAG
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         14074 20 +    134592 TGGATA------T-TGGTCC-AGA-T--GAG
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          24661 20 -     75465 TGGATA------T-TGGTCC-AGA-T--GAG
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              188818 20 -    373494 tggata------t-ttGTCC-AGA-T--GAG
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19809465 20 +  19899266 TGGATA------T-TTGTCC-AGA-T--GAG
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               7459 20 -     15069 TGGACA------T-TTGTCC-AGA-T--GAG
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              7574 20 +     14865 TGGACA------T-TTGTCC-AGA-T--GAG
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6849741 20 +  12164890 CTGAAA------T-TGGTCC-AGA-T--GAG
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     19915 20 -     30946 nnnnnn------n-nnnnnn-nnn-n--nnn
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         4819 20 +     11805 CTGAAA------T-TGGTCC-AGA-T--GAG
i Propithecus_coronatus.k141_1353159                    C 0 I 8
s Propithecus_diadema.k141_577245                           44167 20 +     52369 CTGAAA------T-TGGTCC-AGA-T--GAG
i Propithecus_diadema.k141_577245                       C 0 I 8
s Propithecus_edwardsi.k141_1317105                         36554 20 -     44753 CTGAAA------T-TGGTCC-AGA-T--GAG
i Propithecus_edwardsi.k141_1317105                     C 0 I 8
s Propithecus_perrieri.k141_7554                            18477 20 +     27322 CTGAAA------T-TGGTCC-AGA-T--GAG
i Propithecus_perrieri.k141_7554                        C 0 I 8
s Propithecus_tattersalli.k141_907138                       18111 20 -     53241 CTGAAA------T-TGGTCC-AGA-T--GAG
i Propithecus_tattersalli.k141_907138                   C 0 I 7
s Propithecus_verreauxi.k141_158021                         40375 20 -     48185 CTGAAA------T-TGGTCC-AGA-T--GAG
i Propithecus_verreauxi.k141_158021                     C 0 I 7
s Psammomys_obesus.NESX01026517.1                           36709 14 +     77221 CTGACA------T-TAATTC-A---------
i Psammomys_obesus.NESX01026517.1                       C 0 I 1197
s Pteronotus_parnellii.KE867983.1                            5332 13 -     27784 --------------TGGTCC-AAA-T--GAG
i Pteronotus_parnellii.KE867983.1                       I 6 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        247951 19 -    344369 -TGATT------T-TGGTCC-AGA-T--GAG
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13247247 19 -  17261082 -TGAAT------T-CGATCC-AGA-T--AAG
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             605197 19 -   3946241 -TGAAT------T-CGATCC-AGA-T--AAG
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131535596 19 - 161321710 -TGATT------T-GGGTCC-AGA-T--GAA
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             31563 20 +     56732 TGGACA------T-TTGTCC-AGA-T--GAG
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6808061 20 +   6970761 TGGACA------T-TTGTCC-AGA-T--GAG
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             7450 20 +     18040 TGGACA------T-TTGTCC-AGA-T--GAG
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                17320 19 +     68503 -TGAAT------T-TGGTCC-AGA-T--GAG
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1789124 19 +   2252614 -TGAAT------C-TGATCC-AGA-T--GAG
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                            1846 20 -     17045 TGGACA------T-TTGTCC-AGA-T--GAG
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206379334 20 - 206558726 TGGACA------T-TTGTCC-AGA-T--GAG
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44858236 20 -  45163003 TGGACA------T-TTGTCC-AGA-T--GAG
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                20583 19 +    109198 -TAAAT------T-CAGTCC-AGA-T--AAG
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       9487 19 +     12214 -TGAAT------T-TGGTCC-AGA-T--GAG
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15674080 20 -  43202129 tggatg------t-tgGTCC-AGA-T--GAG
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        5993 20 +     34089 TGGATG------T-TGGTCC-AGA-T--GAG
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              5935 20 -     60842 TGGATG------T-TGGTCC-AGA-T--GAG
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              6028 20 +     67014 TGGATG------T-TGGTCC-AGA-T--GAG
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              6006 20 +     60816 TGGATG------T-TGGTCC-AGA-T--GAG
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 5943 20 -     76454 TGGATG------T-TGGTCC-AGA-T--GAG
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17342675 20 -  30362882 TGGATA------T-TGGTCC-AGA-T--GAG
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         22036 20 -     62485 TGGATA------T-TGGTCC-AGA-T--GAG
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   37951 19 -    114521 -TGAAT------T-TGGTCC-AGA-T--GAG
i Scalopus_aquaticus.ScaAqu_scaffold_9300               I 1 C 0
s Semnopithecus_entellus.k141_1572367                        5066 20 +     15331 TGGACA------T-TTGTCC-AGA-T--GAC
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      10441 20 +     20762 TGGACA------T-TTGTCC-AGA-T--GAC
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         120446 20 +    130994 TGGACA------T-TTGTCC-AGA-T--GAC
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           39225 20 +     46263 TGGACA------T-TTGTCC-AGA-T--GAC
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     32370 20 +     42640 TGGACA------T-TTGTCC-AGA-T--GAC
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        15392 20 +     30600 TGGACA------T-TTGTCC-GGA-T--GAC
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  101670 14 -    120886 CTGACA------C-AAATTC-A---------
i Sigmodon_hispidus.SigHis_scaffold_11332               I 2 I 3004
s Solenodon_paradoxus.SolPar_flattened_line_1012            20137 18 +    739146 --CAAT------C-TGGTTC-AGA-T--CAG
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17767699 14 -  27805282 ------------T-TGGTCC-ACC-T--GAA
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2241175 20 +   2842873 CTGAAA------T-TAATCC-AAA-T--GAG
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            28845 19 +     62062 -TGATT------T-GGGTTC-AGA-T--GAA
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189273352 19 + 218635234 -TGAAT------T-TGGTCC-AGA-T--GAG
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        16570 20 -  13920577 TGGATA------T-TTGTCC-AGA-T--GAG
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                1554 19 +     20549 -AAAAT------C-TGGTCC-AAA-T--GAG
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               15976 20 +     45698 TTGAAT------T-TAGGCC-ATA-T--GCG
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      808395 19 +   1148477 -TGATC------T-TGGTCC-AGA-T--GAG
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  59108 19 +     99546 -TGATC------T-TGGTCC-AGA-T--GAG
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194009467 20 - 194193292 TGGATA------T-TTGTCC-AGA-T--GAG
i Theropithecus_gelada.CM009951.1                       I 4 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             40344 19 -     47444 CTAAAA------T-TAGTCT-AA--A--GAA
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_1305119                  151 20 -       594 TTGAAT------T-TGGTCT-AGA-T--GAG
i Tolypeutes_matacus.TolMat_scaffold_1305119            C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  137306 13 -    259118 --------------TGCTCC-AAG-T--GAC
i Tonatia_saurophila.TonSau_scaffold_3334               I 6 C 0
s Trachypithecus_auratus.k141_738098                        28713 20 +     38948 TGGACA------T-TTGTCC-AGA-T--GAC
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   22273 20 -     32910 TGGACA------T-TTGTCC-AGA-T--GAC
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      4174 20 -     12939 TGGACA------T-TTGTCC-AGA-T--GAC
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       3602 20 -     14244 TGGACA------T-TTGTCC-AGA-T--GAC
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           44995 20 -     54611 TGGACA------T-TTGTCC-AGA-T--GAC
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        2796 20 -     11566 TGGACA------T-TTGTCC-AGA-T--GAC
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     4980 20 -     15592 TGGACA------T-TTGTCC-AGA-T--GAC
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          3632 20 +     14371 TGGACA------T-TTGTCC-AGA-T--GAC
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   1918 20 +     12481 TGGACA------T-TTGTCC-AGA-T--GAC
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        1899 20 -     24393 TGGACA------T-TTGTCC-AGA-T--GAC
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       7043 20 -     28054 TGGACA------T-TTGTCC-AGA-T--GAC
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44661827 20 -  44834318 TGGACA------T-TTGTCC-AGA-T--GAC
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       4139 20 +     13828 TGGACA------T-TTGTCC-AGA-T--GAC
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   6678 19 +     90398 -TGACT------T-TGGTCC-AGA-G--GAG
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16087388 21 +  31416278 ATGAAT------TTTTGTCC-AGA-T--GAG
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2794720 20 -   3938065 CTGAAA------G-TGGTCC-AGA-T--GAG
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    6825 20 +     13056 CTGAAA------G-TGGTCC-AGA-T--GAG
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69314857 19 -  96451834 -TGAAT------T-TGGTCC-AGA-T--GAG
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   8520 19 +     10241 -TAAAT------T-TGGTCC-AGA-T--AAG
i Uropsilus_gracilis.UroGra_scaffold_69449              I 1 C 0
s Ursus_maritimus.KK498671.1                              6516073 19 +  28682327 -TGATT------T-TGGTCC-AGG-T--GAG
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  6376 20 -     20643 CTGAAA------T-TGGTCC-AGA-T--GAG
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             25911 20 -     33872 CTGAAA------T-TGGTCC-AGA-T--GAG
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1525879 17 -   2331223 ---AAT------T-TGGTCC-AGA-T--GAG
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                139813 16 -    281493 ----TT------T-GGGCCA-GGA-G--AAG
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       128129 20 -    134049 CTAAAA------T-TAATCC-AGA-T--GAA
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        215552 19 -    227762 -TGATT------T-TGGTCC-AGA-T--GAG
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     17670 20 -     20485 CTAAAA------T-TAGTCC-AGA-T--GAG
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_127025           8355 19 -      8775 -TGAAT------T-TGGTCC-AGA-T--GAG
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Ochotona_princeps.JH802095.1                            4996729 2205 -  23139505 I
e Spilogale_gracilis.SpiGra_flattened_line_905             236262 1976 -    276980 I
e Procavia_capensis.ProCapCap_scaffold_149274                2467 1156 -      9567 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Megaderma_lyra.MegLyr_scaffold_3562                       64783 239 -    234502 I
e Heterohyrax_brucei.HetBruBak_scaffold_25354               61360 1157 +     73687 I
e Echinops_telfairi.JH980316.1                           22999931  2 -  44670279 I
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1008 325 -      5782 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19677 266 -    119109 I
e Galeopterus_variegatus.GalVar_scaffold_354               157483 1695 +    324696 I
e Tarsius_wallacei.k141_48636                               60532 3805 +     65473 I
e Tarsius_lariang.k141_609102                               27216 3812 +     42269 I
e Rattus_norvegicus.chr11                                13915860 1475 +  90463843 I
e Nannospalax_galili.KL201303.1                            119252 614 +    362372 I
e Mus_spretus.CM004110.1                                 74333573 2703 +  97876770 I
e Mus_pahari.LT608305.1                                  67557037 2889 +  89017189 I
e Mus_musculus.chr16                                     75490838 2711 +  98207768 I
e Mus_caroli.LT608236.1                                  70767758 3738 +  92629107 I
e Dolichotis_patagonum.DolPat_scaffold_14102                36772 276 -     73477 I
e Dasyprocta_punctata.DasPun_flattened_line_634             59553 276 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                18462 277 +     26546 I
e Ctenodactylus_gundi.CteGun_scaffold_447                  209506 3013 -    956709 I
e Cephalopachus_bancanus.k141_702587                         8788 3391 +     21754 I
e Cavia_tschudii.CavTsc_scaffold_488                       177453 271 +    436027 I
e Cavia_porcellus.DS562889.1                             15799262 290 -  24440124 I
e Cavia_aperea.AVPZ01000278.1                            15787326 288 -  24422027 I
e Carlito_syrichta.NW_007248099.1                          309764 3411 +    345090 I
e Pan_paniscus.CM003386.1                               127575888 480 - 205426864 I
e Pan_troglodytes.CM009241.2                            120153042 480 - 196562556 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               15239 19 +    209709 AATGC---TT------A---------------A-GGT-CT--ACTTG
s Acinonyx_jubatus.LLWD01000356.1                         2035254 21 +   3721120 AATGC---TG------A---------------A-GTT-CTATATTTC
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10658821 21 +  23371972 AATGC---TG------A---------------A-GGT-CAATATTTC
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7095956 21 -  16596857 AATGC---TG------A---------------A-GGT-CTATATTTC
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   19512 11 -     22067 AGTGT---TA------A---------------A-TG-----------
i Allactaga_bullata.AllBul_scaffold_70162               C 0 I 1880
s Allenopithecus_nigroviridis.k141_2469532                   2969 19 -     60446 AATGC---TT------A---------------A-GGT-CT--ACTTC
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         3686 19 -     29318 AATGC---TT------A---------------A-GGT-CT--ACTTC
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         2622 19 +     38766 AATGC---TT------A---------------A-GGT-CT--ACTTC
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          3580 19 -     80423 AATGC---TT------A---------------A-GGT-CT--ACTTC
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            11567 19 -     18050 AATGC---TA------G---------------A-GGT-CT--ACTTT
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_1710068                               1283 19 +      1555 AATGC---TA------G---------------A-GGT-CT--ACTTT
i Alouatta_caraya.k141_1710068                          C 0 C 0
s Alouatta_discolor.k141_811576                             12240 19 -     21359 AATGC---TA------G---------------A-GGT-CT--ACTTT
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                1863 19 +      2129 AATGC---TA------G---------------A-GGT-CT--ACTTT
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_2177643                          1240 19 -      1868 AATGC---TA------G---------------A-GGT-CT--ACTTT
i Alouatta_macconnelli.k141_2177643                     C 0 C 0
s Alouatta_nigerrima.k141_3537692                            1289 19 +      1660 AATGC---TA------G---------------A-GGT-CT--ACTTT
i Alouatta_nigerrima.k141_3537692                       C 0 C 0
s Alouatta_palliata.k141_2764429                             1209 19 -      1480 AATGC---TA------G---------------A-GGT-CT--ACTTT
i Alouatta_palliata.k141_2764429                        C 0 C 0
s Alouatta_puruensis.k141_131505                              496 19 +      4855 AATGC---TA------G---------------A-GGT-CT--ACTTT
i Alouatta_puruensis.k141_131505                        C 0 C 0
s Alouatta_seniculus.k141_1531728                            1424 19 -      1692 AATGC---TA------G---------------A-GGT-CT--ACTTT
i Alouatta_seniculus.k141_1531728                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3521678 19 +   4113121 AATGC---TG------A---------------A-GGT-CT--ATTTC
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      391776 19 -    631301 AATGG---TG------A---------------T-GAT-CC--ATTTC
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_42841            32258 19 +     33004 AATGC---TG------A---------------A-GAT-CT--ATTTC
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 C 0
s Aotus_azarae.k141_3170768                                 63909 19 +     78111 AATGC---TT------G---------------A-GGT-CT--ACTTT
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            6852 19 +     22701 AATGC---TT------G---------------A-GGT-CT--ACTTT
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5750809 19 +   9889416 AATGC---TT------G---------------A-GGT-CT--ACTTT
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             7398 19 -    104377 AATGC---TT------G---------------A-GGT-CT--ACTTT
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               7400 19 +     23246 AATGC---TT------G---------------A-GGT-CT--ACTTT
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_231055                     1288 15 -      2492 AC------TG------A---------------A-GGC-CT--ACTC-
i Aplodontia_rufa.AprRuf_scaffold_231055                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        2199 19 +      9265 AAGGC---TG------A---------------A-GGT-CT--ACTTC
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                10194 19 -     29036 AATGG---TG------A---------------T-GAT-CC--AAGTC
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9540676 19 +  39197703 AATGC---TT------G---------------A-GGT-CT--ACTTT
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             61949 19 +     85812 AATGC---TT------G---------------A-GGT-CT--ACTTT
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                12962 19 +     89302 AATGC---TT------G---------------A-GGT-CT--ACTTT
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             17463 19 -     58268 AATGC---TT------G---------------A-GGT-CT--ACTTT
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             65457 19 +    119057 AATGC---TT------G---------------A-GGT-CT--ACTTT
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               7426 19 -     25888 AATGC---TT------G---------------A-GGT-CT--ACTTT
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 7938 11 -     16375 --------------------------------A-GGT-CT--ACTTC
i Avahi_laniger.k141_2840928                            I 7 C 0
s Avahi_peyrierasi.k141_798820                               1554 11 +      6337 --------------------------------A-GGT-CT--ACTTC
i Avahi_peyrierasi.k141_798820                          I 7 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26381649 19 +  51448160 AATGC---CG------A---------------A-GGT-CT--ATTTC
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        6822 19 -     13118 AATGC---CG------A---------------A-GGT-CT--ATTTC
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   44783 19 -     72089 AATGC---TG------A---------------A-GGT-CT--ATTTC
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                  6561405 19 +   6870073 AATGC---TG------A---------------A-GGT-CT--ATTTC
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                138141527 19 - 161108492 AATGC---TG------A---------------A-GGT-CT--ATTTC
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     574057 19 -    998990 AACGC---TG------A---------------A-GGT-CT--ATTTC
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                 136297260 19 - 158972876 AATGC---TG------A---------------A-GGT-CT--ATTTC
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                              1234341 19 -   1914593 AATGC---TG------A---------------A-GGT-CT--ATTTC
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               115310 19 -    171031 AATGC---TT------G---------------A-GGT-CT--GCTTT
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 14339 19 +    125063 AATGC---TT------G---------------A-GGT-CT--GCTTT
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                16382 19 -    216513 AATGC---TT------G---------------A-GGT-CT--GCTTT
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        8925 19 -    134917 AATGC---TT------G---------------A-GGT-CT--GCTTT
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3220791 19 -   8989139 AAGGC---TG------A---------------A-GGT-CT--CTTCC
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           398492 19 -  15254737 AAGGC---TG------A---------------A-GGT-CT--CTTCC
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2974228 19 +   6889770 AAGGC---TG------A---------------A-GGT-CT--CTTCC
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11520992 21 +  39901454 AATGC---TG------A---------------A-GGT-CTAAATTTC
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   16017 21 +     87036 AATGC---TG------A---------------A-GGT-CTAAATTTC
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11267661 21 -  35597290 AATGC---TG------A---------------A-GGT-CTAAATTTC
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11090194 21 +  39895921 AATGC---TG------A---------------A-GGT-CTAAATTTC
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16457207 21 -  44759192 AATGC---TG------A---------------A-GGT-CTAAATTTC
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21326739 19 + 157394656 AATGC---TG------A---------------A-GGT-CT--ATTTC
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135707956 19 - 157403528 AATGC---TG------A---------------A-GGT-CT--ATTTC
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_790727                    72 19 -      1550 ACTGC---TA------A---------------A-AAT-CT--ACCTC
i Capromys_pilorides.CapPil_scaffold_790727             C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               60981 19 +     67245 AATGG---TG------A---------------T-GAT-CC--ATTTC
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_47037                   32340  1 +     33760 ------------------------------------C----------
i Castor_canadensis.CasCan_scaffold_47037               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   160402 19 -    276539 AATGC---TG------A---------------A-GGT-CT--GTTTC
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18892150 19 -  29618158 AATGC---TT------G---------------A-GGT-CT--ACTTT
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 9694 19 -     26817 AATGC---TT------G---------------A-GGT-CT--ACTTT
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                13937 19 +     25043 AATGC---TT------G---------------A-GGT-CT--ACTTT
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4365174 19 +   7569818 TGTGC---TG------A---------------G-GGT-CT--ATTTT
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         4931 19 -      9338 TGTGC---TG------A---------------G-GGT-CT--ATTTT
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6556912 19 +   6739814 AATGC---TC------A---------------A-GGT-CT--ACTTC
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      28386 19 +     60454 AATGC---TC------A---------------A-GGT-CT--ACTTC
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          3593 19 -     21101 AATGC---TC------A---------------A-GGT-CT--ACTTC
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         60903 19 -    107033 AATGC---TC------A---------------A-GGT-CT--ACTTC
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        3786 19 -     17608 AATGT---TT------A---------------A-GGT-CT--ACTTC
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                           945 19 +     45019 AATGT---TT------A---------------A-GGT-CT--ACTTC
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           1029 19 +     15177 AATGC---TT------A---------------A-GGT-CT--ACTTC
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          3829 19 +     16677 AATGC---TT------A---------------A-GGT-CT--ACTTC
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           25999 19 +     35983 AATGT---TT------A---------------A-GGT-CT--ACTTC
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11992527 19 +  12117833 AATGT---TT------A---------------A-GGT-CT--ACTTC
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46479285 19 +  46592721 AATGT---TT------A---------------A-GGT-CT--ACTTC
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      42839 19 -     45581 AATGC---TT------A---------------A-GGT-CT--ACTTC
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       3841 19 +     35577 AATGT---TT------A---------------A-GGT-CT--ACTTC
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        3614 19 -     25661 AATGT---TT------A---------------A-GGT-CT--ACTTC
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        3593 19 -     17744 AATGT---TT------A---------------A-GGT-CT--ACTTC
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        23199 19 +     37128 AATGC---TT------A---------------A-GGT-CT--ACTTC
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           4016 25 -      6963 AATGC---TA------TAGGTGTATTTATTTCA-G------------
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           60203 19 -     68416 AATGC---TG------A---------------A-GGT-CT--ACTTC
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            9255 19 +     13308 AATGC---TG------A---------------A-GGT-CT--ACTTC
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             6967 19 -     18223 AATGC---TT------G---------------A-GGT-CT--GCTTT
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             23985 19 +     25473 AATGC---TT------G---------------A-GGT-CT--GCTTT
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           43025 19 +     57117 AATGC---TT------G---------------A-GGT-CT--GCTTT
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          47704 19 +     54541 AATGC---TT------G---------------A-GGT-CT--GCTTT
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15962981 19 +  43084221 ACTGC---TA------A---------------A-AAT-CT--ACCTC
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         72507 19 +    196370 AATGC---TT------G---------------A-GGT-CT--GCTTT
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          16687 19 +     40510 AATGC---TT------G---------------A-GGT-CT--GCTTT
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15141196 19 -  15256731 AATGC---TT------A---------------A-GGT-CT--ACTTC
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      35805 19 -     53260 AATGC---TT------A---------------A-GGT-CT--ACTTC
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101146364 19 + 101219884 AATGC---TT------A---------------A-GGT-CT--ACTTC
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10888349 19 +  10971483 AATGC---TT------A---------------A-GGT-CT--ACTTC
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147666277 19 + 156195979 AATGC---TT------A---------------A-GGT-CT--ACTTC
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            18260 19 +     23629 AATGC---TT------A---------------A-GGT-CT--ACTTC
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60620836 19 +  78930452 AATGA---CA------A---------------A-GGT-GT--ATTGC
i Condylura_cristata.JH655880.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_848148              806 19 +      1327 AATGC---TA------A---------------T-GAT-GA--ATTTC
i Crocidura_indochinensis.CroInd_scaffold_848148        C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            53311 21 -     70449 AATGC---TG------A---------------A-GTT-CTATATTTC
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 32338 19 -     67205 ACTGC---TA------A---------------A-AAT-CT--ACTTC
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          184888 10 -   6883506 AATGC---TT------T---------------A-G------------
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16846068 19 +  31942871 AATGC---TG------A---------------A-GGT-CT--ACTTC
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80038272 19 -  96802777 AATAC---AA------A---------------A-GGT-CT--ATTTC
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18700271 19 -  18957592 AATGG---TG------A---------------T-GAT-CC--ATTTC
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 323826 19 +    993696 TGTGC---TG------A---------------A-GGT-CT--ATTTT
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   4463 19 +    151128 TGTGC---TG------A---------------G-GGT-CT--ATTTT
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   158178 19 +    228994 ACTGC---TA------A---------------A-AAT-CT--ACTTC
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Eidolon_helvum.KE772537.1                                 13545 19 +     24177 AATGC---CG------A---------------T-GGT-CT--ATTTC
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1493008 19 +   1727528 AATGC---TG------A---------------A-GGT-CT--ATTTC
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7830003 20 +  15467074 AATGC---TA------A---------------CAGAT-AT--ATTCT
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85873394 21 +  99434291 AATGC---TG------A---------------A-GGT-CTATATTTC
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4708225 19 +   6522550 AATGC---TG------A---------------T-GTT-CT--ATTTC
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5854462 19 -   7175178 CATGC---TG------A---------------A-CGT-CT--GTTTC
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13352962 19 +  41866177 CATGC---TG------A---------------A-CGT-CT--GTTTC
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          14452 19 +     92910 CATGC---TG------A---------------A-CGT-CT--GTTTC
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11641742 18 +  16010500 -AAGC---TG------A---------------A-GGA-GT--CTTTC
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48778375 19 -  48907691 AATGC---TT------A---------------A-GGT-CT--ACTTC
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          316490 19 +    330699 AATGC---CG------A---------------A-GGT-CT--ATTTC
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             62944 19 +     89355 AATGC---CG------A---------------A-GGT-CT--ATTTC
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              6242 19 +     13586 AATGC---TG------A---------------A-GGT-TT--ACTTC
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               6174 19 -      6809 AATGC---TG------A---------------A-GGT-TT--ACTTC
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            12648 19 +     36558 AATGC---TG------A---------------A-GGT-TT--ACTTC
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             8965 19 +     60246 AATGC---TG------A---------------A-GGT-TT--ACTTC
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                12447 19 +    109717 AATGC---TG------A---------------A-GGT-TT--ACTTC
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                  432 19 -     19505 AATGC---TG------A---------------A-GGT-TT--ACTTC
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                17107 19 +     27497 AATGC---TG------A---------------A-GGT-TT--ACTTC
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           19563 19 +     26808 AATGC---TG------A---------------A-GGT-TT--ACTTC
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                34301 19 +     46535 AATGC---TG------A---------------A-GGT-TT--ACTTC
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              17027 19 -     29447 AATGC---TG------A---------------A-GGT-TT--ACTTC
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129894226 21 - 159252932 AATGC---TG------A---------------A-GTT-CTATATTTC
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129281310 21 - 158578461 AATGC---TG------A---------------A-GTT-CTATATTTC
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 22448 21 +     52776 AATGC---TG------A---------------A-GTT-CTATATTTC
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13892642 19 -  19261668 ATTGC---TA------A---------------A-AAT-CT--ACTTC
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     212105 19 -    847004 AATGC---TG------A---------------A-GTT-CT--ACTTC
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           14476 19 -     43889 AATGC---TG------A---------------A-GTT-CT--ACTTC
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          11544 19 +     27357 AACTC---TG------A---------------A-GTT-CT--ACTTC
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    182803 19 -    189561 AATGC---TG------A---------------A-GGT-CT--GTTTC
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           15049 19 -     18683 ATTGC---CG------A---------------A-GGT-CT--CCTTG
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               6953 19 -     14630 AATGC---TA------A---------------A-GGT-CT--ACTTC
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119654053 19 - 195582420 AATGC---TA------A---------------A-GGT-CT--ACTTC
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   78461 19 +    118900 ACTGC---TA------A---------------A-GGT-CT--CCTTG
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         3032 19 +     10286 AATGC---TG------A---------------A-GGT-CT--ACTTC
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             1512 19 -     11661 AATGC---TG------A---------------A-GGT-CT--ACTTC
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             6838 19 +     56096 AATGC---TG------A---------------A-GGT-CT--ACTTC
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        30087 19 -     42470 AATGC---TG------A---------------A-GGT-CT--ACTTC
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        46715 19 -     54384 AATGC---TG------A---------------A-GGT-CT--ACTTC
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              18506 21 +     53719 AATGC---TG------A---------------A-GTT-CTATATTTG
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                29027 19 -     91191 AATGC---TG------A---------------A-GGT-CT--ATTTC
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2552362 19 +  31725842 ACTGC---TA------A---------------A-AAT-CT--ACTTC
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              148362 19 +    277961 AATGC---TG------A---------------A-GGT-CT--GTTTC
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      279677 19 -    477199 AAATC---TC------A---------------G-TGT-CT--ATTAT
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_345408               674 19 -       919 AAGGC---TC------A---------------G-GGT-CT--ATTGT
i Hipposideros_galeritus.HipGal_scaffold_345408         C 0 C 0
s Hoolock_leuconedys.ctg79                                      6643 19 -   7690867 AATGC---TT------A---------------G-GGT-CT--ACTTC
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 18576 21 -     67322 AATGC---TG------A---------------A-GTT-CTATATTTC
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hylobates_abbotti.k141_164775                              1426 19 -      2073 GATGC---TT------A---------------T-GGT-CT--ACTTC
i Hylobates_abbotti.k141_164775                         C 0 C 0
s Hylobates_agilis.k141_1621614                              1453 19 -      1673 AATGC---TT------A---------------A-GGT-CT--ACTTC
i Hylobates_agilis.k141_1621614                         I 41 n 31
s Hylobates_klossii.k141_183401                               979 19 -      1272 AATGC---TT------A---------------T-GGT-CT--ACTTC
i Hylobates_klossii.k141_183401                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14626331 19 -  25970782 AATGC---TT------A---------------T-GGT-CT--ACTTC
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_950183                             1027 19 +      2027 AATGC---TT------A---------------T-GGT-CT--ACTTC
i Hylobates_muelleri.k141_950183                        C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             35491 19 -     60944 AATGC---TT------A---------------T-GGT-CT--ACTTC
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     7437 19 +     22540 ATTGC---TA------A---------------A-AAT-CT--ACTTC
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7127278 19 +  13083262 ACTAC---TG------A---------------A-GGA-CT--ACTTT
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 I 1
s Indri_indri.k141_5141390                                   1564 19 -      3181 AATGC---TG------A---------------A-GGT-CT--ACTTC
i Indri_indri.k141_5141390                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              10479 19 +     17520 AATGC---CA------A---------------A-GGT-CT--ATTTC
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH727545.1                                 2459 11 -      4668 AGTGC---TA------A---------------A-TG-----------
i Jaculus_jaculus.JH727545.1                            C 0 I 323
s Kogia_breviceps.KogBre_flattened_line_35920               25082 19 +     37189 AATGC---CA------G---------------A-GGT-CT--ATTTC
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          51547 19 -    147782 AATGC---TT------G---------------A-GGT-CT--ACTTT
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lemur_catta.scaffold_1                                258408390 19 - 285822530 AATGC---TG------A---------------A-GGT-CT--ACTTC
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        25141 19 +     39228 AATGC---TG------A---------------A-GGC-CT--ACTTC
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            54527 19 +     63517 AATGC---TG------A---------------A-GGC-CT--ACTTC
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        79789 19 +    116806 AATGC---TG------A---------------A-GGC-CT--ACTTC
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     32780 19 -     33031 AATGC---TG------A---------------A-GGC-CT--ACTTC
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3087257 21 -   3498232 AATGC---TT------A---------------A-GGT-CTGTATTTC
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    14914 20 +     22452 AATGT---TG------A---------------A-GTTTCA--CTTCA
i Lepus_americanus.LepAme_scaffold_62849                C 0 I 310
s Lipotes_vexillifer.KE558548.1                            137435 19 +   3060487 AATGT---CA------A---------------A-GGT-CT--ATTTC
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19249993 25 +  19376315 AATGC---TTAAGGTTA---------------A-GGT-CT--ACTTC
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           11827 19 +     84689 AATGC---TG------A---------------A-GGT-CT--AATTC
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3779576 19 +   6799190 AATGC---TG------A---------------A-GGT-CT--AATTC
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20596414 20 -  62548349 AATCC---TG------A---------------GAGAC-CT--ATTTC
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11089650 21 +  39895028 AATGC---TG------A---------------A-GGT-CTAAATTTC
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             21750 19 +     74745 AATGC---TT------A---------------A-GGT-CT--ACTTC
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12708210 19 +  12821369 AATGC---TT------A---------------A-GGT-CT--ACTTC
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                 788 19 -     26467 AATGC---TT------A---------------A-GGT-CT--ACTTC
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           48655 19 +     63263 AATGC---TT------A---------------A-GGT-CT--ACTTC
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                  765 19 -     26361 AATGC---TT------A---------------A-GGT-CT--ACTTC
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 3942 19 -      7381 AATGC---TT------A---------------A-GGT-CT--ACTTC
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  47180 19 -     79256 AATGC---TT------A---------------A-GGT-CT--ACTTC
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196037282 19 + 196197964 AATGC---TT------A---------------A-GGT-CT--ACTTC
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11447448 19 +  11645122 AATGC---TT------A---------------A-GGT-CT--ACTTC
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   6134 19 -     46448 AATGC---TT------A---------------A-GGT-CT--ACTTC
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                3800 19 -     13212 AATGC---TT------A---------------A-GGT-CT--ACTTC
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 17477 19 -     55006 AATGC---TT------A---------------A-GGT-CT--ACTTC
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43842583 19 +  43892939 AATGC---TT------A---------------A-GGT-CT--ACTTC
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               18764 19 -     24607 AATGC---TT------A---------------A-GGT-CT--ACTTC
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               6131 19 -     27140 AATGC---TT------A---------------A-GGT-CT--ACTTC
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                702261 19 +    802869 AATGC---TG------A---------------T-GGT-CT--ATTTC
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43439161 19 -  43563597 AATGC---TC------A---------------A-GGT-CT--ACTTC
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4451975 19 -   4543643 AATGC---TC------A---------------A-GGT-CT--ACTTC
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            147330 19 +    252755 aATGC---TG------A---------------A-CAA-CT--ATTTT
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             37473 19 +     58827 aATGC---TG------A---------------A-CAT-CT--ATTTT
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36875186 19 +  64221397 ACTGC---TG------A---------------A-AGA-CT--ACTTT
i Marmota_marmota.CZRN01000005.1                        C 0 I 1
s Mellivora_capensis.MelCap_flattened_line_15433             2293 21 -     87323 AACGC---TA------A---------------A-GGT-CTATATTTC
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                      66 19 -     12939 AATGC---CA------A---------------A-GGT-CT--ATTCC
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16511424 19 +  47401472 AATGC---TG------A---------------A-TGT-CT--ACTTC
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  39589 20 -     48017 AATGC---AC------A---------------GAGAT-CC--ACTTC
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               24148 19 -     32043 CATGG---TG------A---------------T-GAC-CC--TTTTC
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8212268 19 +  10048721 AATGC---TA------A---------------C-GGT-CT--ATTTC
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            36757 19 +     45743 AATGC---TA------A---------------T-GGT-CT--ATTTC
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         3726 19 +     29742 AATGC---TT------A---------------A-GGT-CT--ACTTC
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        12784 20 -    104932 AATGC---T-------A---------------A-GGT-CTGTATTTC
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_226143                                     6813 19 +      8497 AATGC---TA------A---------------A-TGT-CT--ACTTC
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 147862 19 +    154973 AATAC---AA------A---------------A-GGT-CT--ATTTC
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                162695 18 +    265003 AATGC---TG------A---------------T-TGT-CC---ATTT
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  3051 19 -     19904 AATGC---TG------A---------------A-GGT-CT--ATTTC
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  146205 21 -    168139 AAAAC---TG------A---------------A-GTT-CTATATTTC
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          23700 19 -    100666 AATGC---TG------A---------------T-GGT-CT--ATTTC
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             13560 19 +     98495 ACTTC---TG------A---------------A-GGT-CT--CCTTG
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4425658 21 -  28371801 AATGC---TG------A---------------A-GGT-CTATATTTC
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     91664 19 -    117718 ACTGC---TA------A---------------A-AAG-CT--ATCTC
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               970565 19 +   8389877 AATGC---TG------A---------------T-GAT-CT--ATTTC
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5021990 19 +   6462685 AATGC---TG------A---------------T-GAT-CG--ATTTC
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3468068 19 -   3747815 AATGC---TG------A---------------T-GAT-CT--ATTTC
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        13311 19 +     66751 AATGC---TG------A---------------T-GAT-CG--ATTTC
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             6328 19 -      8794 AACAC---TG------T---------------A-GAC-AT--ATCTC
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nasalis_larvatus.k141_153429                              10199 19 +     48152 AATGC---TT------A---------------A-GGT-CT--ATTTC
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4486174 21 -  14209539 AATGC---TT------A---------------A-GGT-CTATATTTC
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3952474 19 -   4490290 AATAC---CA------A---------------A-GGT-CT--ATTTC
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Nomascus_annamensis.k141_224620                             797 19 -      2316 AATGC---TT------A---------------T-GGT-CT--ACTTC
i Nomascus_annamensis.k141_224620                       C 0 C 0
s Nomascus_concolor.k141_226614                              2894 19 -      5092 AATGC---TT------A---------------T-GGT-CT--ACTTC
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_1032971                            464 19 -      1918 AATGC---TT------A---------------A-GGT-CT--ACTTC
i Nomascus_gabriellae.k141_1032971                      C 0 C 0
s Nomascus_siki_b.tarseq_80                             26646 19 -  18771707 AATGC---TT------A---------------T-GGT-CT--ACTTC
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  4316 19 +      4512 AATGC---TT------A---------------A-GGT-CT--ACTTC
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                32434 21 +   3668941 AATAC---TG------A---------------A-GGT-CTAAATTTC
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65568281 19 -  95554990 AATGC---TG------A---------------A-GGT-CT--AATTC
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            5007 19 +      6470 AATGC---TG------A---------------A-GGT-CT--AATTC
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65670614 19 +  89412551 AATGC---CG------A---------------A-GGT-CT--AATTC
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Octodon_degus.JH651621.1                                3687164 20 +  10294119 ACTGC---TA------A---------------AAAAT-CT--ACTTC
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             680836 21 -   3126709 AATGC---TT------A---------------A-GGT-CTATATTTC
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1081227 19 +   1425656 AATGC---TG------A---------------A-GGT-CT--ATTTC
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         38530 19 +     78940 AATGC---TA------A---------------A-GGT-CT--ATTTC
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Orcinus_orca.KB316965.1                                 7226159 19 -   7562323 AATGC---CA------A---------------A-GGT-CT--ATTTC
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              61364 20 -     66828 AATGT---TA------A---------------GAAAC-AT--ATTTC
i Orycteropus_afer.OryAfe_flattened_line_13509          I 80 C 0
s Oryctolagus_cuniculus.CM000803.1                      141877949 20 + 163896628 AATGT---TG------A---------------C-GTTTCA--CCTTA
i Oryctolagus_cuniculus.CM000803.1                      C 0 I 310
s Otocyon_megalotis.JAEUCK010005121.1                      309727 21 -    505867 AATGC---TG------A---------------A-GGT-CTAAATTTC
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        1920 19 -     53940 AATGC---TG------A---------------A-GAT-CT--ACTTC
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18009901 19 -  38779656 AATGC---TG------A---------------A-GAT-CT--ACTTC
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134078819 19 - 275406953 AATGC---TG------A---------------A-GGT-CT--ATTTC
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      80033 19 +    140051 AATGC---TG------A---------------A-GGT-CT--ATTTC
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  35593 21 +    295523 AATGC---TG------A---------------A-GTT-CTATATTTC
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3639343 21 +  18214204 AATGC---TG------A---------------A-GTT-CTATATTTC
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5029019 21 -   6340057 AATGC---TG------A---------------A-GTT-CTATATTTC
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1067678 19 -   1292953 AATGC---TG------A---------------A-GGT-CT--GTTTC
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188157959 22 - 188283584 AATGC---TT--G-TTA---------------A-GGT-CT--ACTTC
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              1051 22 +     25005 AATGCTTGTT------A---------------A-GGT-CT--ACTTC
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47515336 19 +  47705337 AATGC---TT------A---------------A-GGT-CT--ACTTC
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 69326 19 -    104429 AATGC---TT------A---------------A-GGT-CT--ACTTC
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    7855 19 +     14967 AATGC---TT------A---------------A-GGT-CT--ACTTC
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 3720 19 -      7628 AATGC---TT------A---------------A-GGT-CT--ACTTC
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    117083 21 -    135482 AATGC---TG------A---------------A-GTT-CTATATTTC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           6604 19 -     23713 AATGC---TG------A---------------A-GGT-CT--ACTTC
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            25918 19 -     27972 AATGC---TG------A---------------A-GGG-CT--ACTTC
i Perodicticus_potto.k141_713187                        C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    14867 19 -     36578 ACAAC---TA------A---------------A-AAT-CT--ACTTC
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071               617 19 +      8220 AATAC---CA------A---------------A-GGT-CT--ATTTC
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Piliocolobus_badius.k141_1987485                           3732 19 -      5908 AATGC---TT------A---------------A-GGT-CT--ACTTC
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       4350 19 -     17985 AATGC---TT------A---------------A-GGT-CT--ACTTC
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            3717 19 +      7694 AATGC---TT------A---------------A-GGT-CT--ACTTC
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26742201 19 +  26888534 AATGC---TT------A---------------A-GGT-CT--ACTTC
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pithecia_albicans.k141_991845                             45149 19 -     61926 AATGC---TT------G---------------A-GGT-CT--GCTTT
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        26532 19 +     78826 AATGC---TT------G---------------A-GGT-CT--GCTTT
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                             10580 19 -     15800 AATGC---TT------G---------------A-GGT-CT--GCTTT
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        13779 19 -     16101 AATGC---TT------G---------------A-GGT-CT--GCTTT
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          7008 19 +      9673 AATGC---TT------G---------------A-GGT-CT--GCTTT
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13476008 19 -  19735023 AATGC---TT------G---------------A-GGT-CT--GCTTT
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           14911 19 -     31692 AATGC---TT------G---------------A-GGT-CT--GCTTT
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           7079 19 +     21690 AATGC---CA------A---------------A-GGT-CT--ATTTC
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       24246 19 +     44506 AAAGC---TT------G---------------A-GGT-CT--GATTT
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        24459 19 +     67491 AAAGC---TT------G---------------A-GGT-CT--GATTT
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      14698 19 -     98129 AAAGC---TT------G---------------A-GGT-CT--GATTT
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     24298 19 +    147771 AAAGC---TT------G---------------A-GGT-CT--GATTT
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                          934 19 -     43940 AAAGC---TT------G---------------A-GGT-CT--GATTT
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          5017 19 -     55515 AAAGC---TT------G---------------A-GGT-CT--GATTT
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         24371 19 +    152463 AAAGC---TT------G---------------A-GGT-CT--GATTT
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       2088 19 -    119457 AAAGC---TT------G---------------A-GGT-CT--GATTT
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         14094 19 +    134592 AAAGC---TT------G---------------A-GGT-CT--GATTT
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          24681 19 -     75465 AAAGC---TT------G---------------A-GGT-CT--GATTT
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              188838 19 -    373494 AATGC---TT------A---------------A-GGT-CT--ACTTC
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19809485 19 +  19899266 AATGC---TT------A---------------A-GGT-CT--ACTTC
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               7479 19 -     15069 AATGC---TT------A---------------A-GGT-CT--ACTTC
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              7594 19 +     14865 AATGC---TT------A---------------A-GGT-CT--ACTTC
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6849761 19 +  12164890 AATGC---TG------A---------------A-GGT-CT--ACTTC
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     19935 19 -     30946 nnnnn---nn------n---------------n-nnn-nn--nnnnn
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         4847 10 +     11805 ----------------------------------GGT-CT--ACTTC
i Propithecus_coronatus.k141_1353159                    I 8 C 0
s Propithecus_diadema.k141_577245                           44195 10 +     52369 ----------------------------------GGT-CT--ACTTA
i Propithecus_diadema.k141_577245                       I 8 C 0
s Propithecus_edwardsi.k141_1317105                         36582 10 -     44753 ----------------------------------GGT-CT--ACTTC
i Propithecus_edwardsi.k141_1317105                     I 8 C 0
s Propithecus_perrieri.k141_7554                            18505 10 +     27322 ----------------------------------GGT-CT--ACTTA
i Propithecus_perrieri.k141_7554                        I 8 C 0
s Propithecus_tattersalli.k141_907138                       18138 11 -     53241 --------------------------------A-GGT-CT--ACTTC
i Propithecus_tattersalli.k141_907138                   I 7 C 0
s Propithecus_verreauxi.k141_158021                         40402 11 -     48185 --------------------------------A-GGT-CT--ACTTC
i Propithecus_verreauxi.k141_158021                     I 7 C 0
s Pteronotus_parnellii.KE867983.1                            5345 18 -     27784 AGTGC---TG------A---------------T-GGT-CA---TATC
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        247970 20 -    344369 -ATGC---TG------A---------------A-GGT-CTATATTTC
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13247266 19 -  17261082 AATGC---TG------A---------------T-GGT-CT--ATTTC
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             605216 19 -   3946241 AATGC---TG------A---------------T-GGT-CT--ATTTC
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131535615 21 - 161321710 AATGC---TG------A---------------A-GTT-CTATATTTC
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             31583 19 +     56732 AATGC---TT------A---------------A-GGT-CT--ACTTC
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6808081 19 +   6970761 AATGC---TT------A---------------A-GGT-CT--ACTTC
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             7470 19 +     18040 AATGC---TT------A---------------A-GGT-CT--ACTTC
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                17339 19 +     68503 AATGC---TG------A---------------A-GGT-CT--ATTTC
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1789143 19 +   2252614 AATGC---TC------A---------------T-GGT-CT--ATTAT
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                            1866 19 -     17045 AATGC---TT------A---------------A-GGT-CT--ACTTC
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206379354 19 - 206558726 AATGC---TT------A---------------A-GGT-CT--ACTTC
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44858256 19 -  45163003 AATGC---TT------A---------------A-GGT-CT--ACTTC
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                20602 19 +    109198 AATCC---TG------A---------------T-GGT-CT--ATTTC
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_82192                       9506 19 +     12214 AATGC---TG------A---------------A-GGT-CT--ATTTC
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15674100 19 -  43202129 AATGC---TT------G---------------G-GGT-CT--ACTTT
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        6013 19 +     34089 AATGC---TT------G---------------G-GGT-CT--ACTTT
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              5955 19 -     60842 AATGC---TT------G---------------G-GGT-CT--ACTTT
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              6048 19 +     67014 AATGC---TT------G---------------G-GGT-CT--ACTTT
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              6026 19 +     60816 AATGC---TT------G---------------G-GGT-CT--ACTTT
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 5963 19 -     76454 AATGC---TT------G---------------G-GGT-CT--ACTTT
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17342695 19 -  30362882 AATGC---TT------G---------------A-GGT-CT--ACTTT
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         22056 19 -     62485 AATGC---TT------G---------------A-GGT-CT--ACTTT
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   37970 19 -    114521 AATGC---TG------A---------------A-GGT-GT--ATTTC
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        5086 19 +     15331 AATGC---TT------A---------------A-GAT-CT--ACTTC
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      10461 19 +     20762 AATGC---TT------A---------------C-GGT-CT--ACTTC
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         120466 19 +    130994 AATGC---TT------A---------------A-GGT-CT--ACTTC
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           39245 19 +     46263 AATGC---TT------A---------------A-GGT-CT--ACTTC
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     32390 19 +     42640 AATGC---TT------A---------------A-GAT-CT--ACTTC
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        15412 19 +     30600 AGTGC---TT------A---------------A-GGT-CT--ACTTC
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            20155 19 +    739146 AACAC---TG------A---------------A-GGT-CT--ATTTC
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17767713 19 -  27805282 AAAGC---TG------A---------------A-GGT-AT--GTTTA
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2241195 19 +   2842873 ACTGC---TG------A---------------A-GGA-CT--ACTTT
i Spermophilus_dauricus.KZ294190.1                      C 0 I 1
s Suricata_suricatta.SurSur_flattened_line_20339            28864 21 +     62062 AATGC---TC------A---------------A-GTT-CTATATTTC
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189273371 19 + 218635234 AATGC---TG------A---------------A-GGT-CT--GTTTC
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        16590 19 -  13920577 AATGC---TT------A---------------T-GGT-CT--ACTTC
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                1573 19 +     20549 AATGC---TG------A---------------C-AAT-CT--ATTTC
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               15996 19 +     45698 AACAC---TG------T---------------A-GAC-AT--ATCTC
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      808414 19 +   1148477 CATGC---TG------C---------------A-GGT-CT--GTTTC
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  59127 19 +     99546 CATGC---TG------A---------------A-GGT-CT--ATTTC
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194009487 25 - 194193292 AATGC---TTAAGGTTA---------------A-GGT-CT--ACTTC
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             40363 19 -     47444 ACAAT---TA------A---------------A-AAT-CT--ACTTC
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_1305119                  171 21 -       594 AATGC---TA------TAGGTGTATTT----CA-G------------
i Tolypeutes_matacus.TolMat_scaffold_1305119            C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  137319 19 -    259118 AATGG---TG------A---------------T-GAT-CC--ATTTC
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        28733 19 +     38948 AATGC---TT------A---------------A-GGT-CT--ACTTC
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   22293 19 -     32910 AATGC---TT------A---------------A-GGT-CT--ACTTC
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      4194 19 -     12939 AATGC---TT------A---------------A-GGT-CT--ACTTC
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       3622 19 -     14244 AATGC---TT------A---------------A-GGT-CT--ACTTC
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           45015 19 -     54611 AATGC---TT------A---------------A-GGT-CT--ACTTC
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        2816 19 -     11566 AATGC---TT------A---------------A-GGT-CT--ACTTC
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     5000 19 -     15592 AATGC---TT------A---------------A-GGT-CT--ACTTC
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          3652 19 +     14371 AATGC---TT------A---------------A-GGT-CT--ACTTC
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   1938 19 +     12481 AATGC---TT------A---------------A-GGT-CT--ACTTC
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        1919 19 -     24393 AATGC---TT------A---------------A-GGT-CT--ACTTC
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       7063 19 -     28054 AATGC---TT------A---------------A-GGT-CT--ACTTC
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44661847 19 -  44834318 AATGC---TT------A---------------A-GGT-CT--ACTTC
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       4159 19 +     13828 AATGC---CT------A---------------A-GGT-CT--ACTTC
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   6697 19 +     90398 AAGGC---TG------A---------------A-GGT-CT--CTTTC
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16087409 20 +  31416278 AATGC---TG------A---------------GAGCT-CT--ATTTC
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2794740 19 -   3938065 AATGC---TG------A---------------A-GGC-CA--ACTTC
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    6845 19 +     13056 AATGC---CG------A---------------A-GGT-CT--ACTTC
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69314876 19 -  96451834 AATGC---CA------A---------------A-GGT-CT--ATTTC
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   8539 19 +     10241 AATGT---TG------A---------------C-ATT-GT--ATTTC
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6516092 21 +  28682327 AATGC---TG------A---------------A-GGT-CAATATTTC
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  6396 19 -     20643 AATGC---TG------A---------------A-GGT-CT--ACTTC
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             25931 19 -     33872 AATGC---TG------A---------------A-GGT-CT--ACTTC
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1525896 19 -   2331223 AAGGC---TG------A---------------A-GGC-CT--CTTCC
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                139829 21 -    281493 AATGC---TG------A---------------A-GGT-CTAAATTTC
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       128149 19 -    134049 TCTAC---TG------A---------------A-GGA-CT--ACTTT
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        215571 21 -    227762 AATGC---TT------A---------------A-GGT-CTATATCTC
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     17690 11 -     20485 ACTGC---TA------A---------------A-TA-----------
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 I 105
s Ziphius_cavirostris.ZipCav_flattened_line_127025           8374 19 -      8775 AATGC---CA------A---------------A-GGT-CT--ATTCC
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 C 0
e Ochotona_princeps.JH802095.1                            4996729 2205 -  23139505 I
e Perognathus_longimembris.PerPac_flattened_line_19359       1614 38 +     49596 I
e Dipodomys_stephensi.DipSte_scaffold_84338                  1789 28 -     11986 I
e Dipodomys_ordii.KN672545.1                              3659429 30 +   4240102 I
e Spilogale_gracilis.SpiGra_flattened_line_905             236262 1976 -    276980 I
e Procavia_capensis.ProCapCap_scaffold_149274                2467 1156 -      9567 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Megaderma_lyra.MegLyr_scaffold_3562                       64783 239 -    234502 I
e Lasiurus_borealis.LasBor_scaffold_59542                    4882 159 +     26176 I
e Heterohyrax_brucei.HetBruBak_scaffold_25354               61360 1157 +     73687 I
e Echinops_telfairi.JH980316.1                           22999931  2 -  44670279 I
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1008 325 -      5782 I
e Choloepus_hoffmanni.KN194586.1                           763087  0 +    964067 C
e Choloepus_didactylus.ChoDid_scaffold_36182                17782  0 -     21363 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19677 266 -    119109 I
e Galeopterus_variegatus.GalVar_scaffold_354               157483 1695 +    324696 I
e Microtus_ochrogaster.CM001673.1                        22821073 2807 -  98408828 I
e Tarsius_wallacei.k141_48636                               60532 3805 +     65473 I
e Tarsius_lariang.k141_609102                               27216 3812 +     42269 I
e Sigmodon_hispidus.SigHis_scaffold_11332                  101684 3004 -    120886 I
e Rattus_norvegicus.chr11                                13915860 1475 +  90463843 I
e Psammomys_obesus.NESX01026517.1                           36723 1197 +     77221 I
e Peromyscus_maniculatus.KI615518.1                       4951906 3218 -   8017169 I
e Onychomys_torridus.OnyTor_scaffold_12578                  38526 4229 +     62360 I
e Ondatra_zibethicus.OndZib_scaffold_6821                  126338 3732 +    145789 I
e Nannospalax_galili.KL201303.1                            119252 614 +    362372 I
e Mus_spretus.CM004110.1                                 74333573 2703 +  97876770 I
e Mus_pahari.LT608305.1                                  67557037 2889 +  89017189 I
e Mus_musculus.chr16                                     75490838 2711 +  98207768 I
e Mus_caroli.LT608236.1                                  70767758 3738 +  92629107 I
e Mesocricetus_auratus.KB708139.1                         1048323 2868 -  26018355 I
e Meriones_unguiculatus.MerUng_scaffold_52233               14635 934 +     15977 I
e Ellobius_lutescens.LOEQ01003611.1                        240703 2767 -    369425 I
e Dolichotis_patagonum.DolPat_scaffold_14102                36772 276 -     73477 I
e Dasyprocta_punctata.DasPun_flattened_line_634             59553 276 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                18462 277 +     26546 I
e Ctenodactylus_gundi.CteGun_scaffold_447                  209506 3013 -    956709 I
e Cricetulus_griseus.LT883672.1                          53031727 2939 +  72327488 I
e Cricetomys_gambianus.CriGam_scaffold_949                 279623 2673 -    399297 I
e Cephalopachus_bancanus.k141_702587                         8788 3391 +     21754 I
e Cavia_tschudii.CavTsc_scaffold_488                       177453 271 +    436027 I
e Cavia_porcellus.DS562889.1                             15799262 290 -  24440124 I
e Cavia_aperea.AVPZ01000278.1                            15787326 288 -  24422027 I
e Carlito_syrichta.NW_007248099.1                          309764 3411 +    345090 I
e Acomys_cahirinus.AcoCah_scaffold_1625                    115109 2323 -    189883 I
e Pan_paniscus.CM003386.1                               127575888 480 - 205426864 I
e Pan_troglodytes.CM009241.2                            120153042 480 - 196562556 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               15258 12 +    209709 AAGGAGTTC-ATA
s Acinonyx_jubatus.LLWD01000356.1                         2035275 12 +   3721120 AAGGGGCTC-ATA
i Acinonyx_jubatus.LLWD01000356.1                       C 0 I 222
s Ailuropoda_melanoleuca.LNAT01000321.1                  10658842 12 +  23371972 AAGGCGCTT-ACA
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 I 231
s Ailurus_fulgens.LNAC01000003.1                          7095977 12 -  16596857 AAGGTGCTC-ATA
i Ailurus_fulgens.LNAC01000003.1                        C 0 I 232
s Allenopithecus_nigroviridis.k141_2469532                   2988 12 -     60446 AAGGGGCTC-ATA
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         3705 12 -     29318 AAGGGGCTC-ATA
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         2641 12 +     38766 AAGGGGCTC-ATA
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          3599 12 -     80423 AAGGGGCTC-ATA
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            11586 12 -     18050 AAGGGGCTT-ATA
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_1710068                               1302 12 +      1555 AAGGGGCTT-ATA
i Alouatta_caraya.k141_1710068                          C 0 I 1
s Alouatta_discolor.k141_811576                             12259 12 -     21359 AAGGGGCTT-ATA
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                1882 12 +      2129 AAGGGGCTT-ATA
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_2177643                          1259 12 -      1868 AAGGGGGTT-ATA
i Alouatta_macconnelli.k141_2177643                     C 0 C 0
s Alouatta_nigerrima.k141_3537692                            1308 12 +      1660 AAGGGGCTT-ATA
i Alouatta_nigerrima.k141_3537692                       C 0 C 0
s Alouatta_palliata.k141_2764429                             1228 12 -      1480 AAGGGGCTT-ATA
i Alouatta_palliata.k141_2764429                        C 0 C 0
s Alouatta_puruensis.k141_131505                              515 12 +      4855 AAGGGGCTT-ATA
i Alouatta_puruensis.k141_131505                        C 0 C 0
s Alouatta_seniculus.k141_1531728                            1443 12 -      1692 AAGGGGCTT-ATA
i Alouatta_seniculus.k141_1531728                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3521697 12 +   4113121 AAGGGTATC-ATC
i Ammotragus_lervia.NIVO01013474.1                      C 0 I 216
s Anoura_caudifer.AnoCau_scaffold_422                      391795 12 -    631301 AAGGGGCTC-ATA
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 I 212
s Antilocapra_americana.AntAmePen_scaffold_42841            32277 12 +     33004 AAGAGTATA-ATA
i Antilocapra_americana.AntAmePen_scaffold_42841        C 0 I 217
s Aotus_azarae.k141_3170768                                 63928 12 +     78111 AAGGGGCTT-ATA
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            6871 12 +     22701 AAGGGGCTT-ATA
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5750828 12 +   9889416 AAGGGGCTT-ATA
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             7417 12 -    104377 AAGGGGCTT-ATA
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               7419 12 +     23246 AAGGGGCTT-ATA
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_231055                     1303 12 -      2492 TAAGGGTTT-ATG
i Aplodontia_rufa.AprRuf_scaffold_231055                C 0 N 0
s Arctocebus_calabarensis.k141_587554                        2218 12 +      9265 ACGGGGCTC-ACA
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                10213 12 -     29036 AAGGGGCTC-GTA
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 I 214
s Ateles_geoffroyi_b.tarseq_2582                             9540695 12 +  39197703 AAGGGGCTT-ATA
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             61968 12 +     85812 AAGGGGCTT-ATA
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                12981 12 +     89302 AAGGGGCTT-ATA
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             17482 12 -     58268 AAGGGGCTT-ATA
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             65476 12 +    119057 AAGGGGCTT-ATA
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               7445 12 -     25888 AAGGGGCTT-ATA
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 7949 12 -     16375 AAGGGGTTT-ATG
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               1565 12 +      6337 AAGGGGTTT-ATG
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26381668 12 +  51448160 AAGGGGCTC-ATA
i Balaenoptera_acutorostrata.KI537095.1                 C 0 I 214
s Balaenoptera_bonaerensis.DF502048.1                        6841 12 -     13118 AAGGGGCTC-ATA
i Balaenoptera_bonaerensis.DF502048.1                   C 0 I 214
s Beatragus_hunteri.BeaHun_scaffold_21644                   44802 12 -     72089 AAGGGTATC-ATA
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 I 215
s Bison_bison.KN264915.1                                  6561424 12 +   6870073 AAGGGTATC-ATA
i Bison_bison.KN264915.1                                C 0 I 216
s Bos_indicus.CM003021.1                                138141546 12 - 161108492 AAGGGTATC-ATA
i Bos_indicus.CM003021.1                                C 0 I 217
s Bos_mutus.JH883513.1                                     574076 11 -    998990 AAG-GTATC-ATA
i Bos_mutus.JH883513.1                                  C 0 I 216
s Bos_taurus.CM000177.6                                 136297279 12 - 158972876 AAGGGTATC-ATA
i Bos_taurus.CM000177.6                                 C 0 I 217
s Bubalus_bubalis.KI419065.1                              1234360 12 -   1914593 AAGGGTATC-ATA
i Bubalus_bubalis.KI419065.1                            C 0 I 216
s Cacajao_ayresi.k141_724503                               115329 12 -    171031 AAGGGGCTT-ATA
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 14358 12 +    125063 AAGGGGCTT-ATA
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                16401 12 -    216513 AAGGGGCTT-ATA
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        8944 12 -    134917 AAGGGGCTT-ATA
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3220810 11 -   8989139 AAGAGGCTC-A-A
i Camelus_bactrianus.KN276303.1                         C 0 I 228
s Camelus_dromedarius.KN271192.1                           398511 11 -  15254737 AAGAGGCTC-A-A
i Camelus_dromedarius.KN271192.1                        C 0 I 228
s Camelus_ferus.KB016973.1                                2974247 11 +   6889770 AAGAGGCTC-A-A
i Camelus_ferus.KB016973.1                              C 0 I 228
s CanFam4.chr31                                          11521013 12 +  39901454 AAGGTGCTC-ATA
i CanFam4.chr31                                         C 0 I 228
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   16038 12 +     87036 AAGGTGCTC-ATA
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 I 228
s Canis_lupus_dingo.QKWQ01001993.1                       11267682 12 -  35597290 AAGGTGCTC-ATA
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 I 228
s Canis_lupus_familiaris.chr31                           11090215 12 +  39895921 AAGGTGCTC-ATA
i Canis_lupus_familiaris.chr31                          C 0 I 228
s Canis_lupus_orion.HG994411.1                           16457228 12 -  44759192 AAGGTGCTC-ATA
i Canis_lupus_orion.HG994411.1                          C 0 I 228
s Capra_aegagrus.CM003214.1                              21326758 12 + 157394656 AAGGGTATC-ATA
i Capra_aegagrus.CM003214.1                             C 0 I 215
s Capra_hircus.CM004562.1                               135707975 12 - 157403528 AAGGGTATC-ATA
i Capra_hircus.CM004562.1                               C 0 I 215
s Capromys_pilorides.CapPil_scaffold_790727                    91 12 -      1550 AAAGGACTT-ATA
i Capromys_pilorides.CapPil_scaffold_790727             C 0 I 225
s Carollia_perspicillata.CarPer_scaffold_4436               61000 12 +     67245 AAGGGGCTC-ATG
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 I 213
s Castor_canadensis.CasCan_scaffold_47037                   32341  2 +     33760 -----------TA
i Castor_canadensis.CasCan_scaffold_47037               C 0 I 211
s Catagonus_wagneri.CatWag_scaffold_1305                   160421 12 -    276539 AAAAGGCTC-ATT
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 I 221
s Cebus_albifrons.Contig22                               18892169 12 -  29618158 AAGGGGCTT-ATA
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 9713 12 -     26817 AAGGGGCTT-ATA
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                13956 12 +     25043 AAGGGGCTT-ATA
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4365193 12 +   7569818 AAGGGGCTG-ATG
i Ceratotherium_simum.JH767818.1                        C 0 I 229
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         4950 12 -      9338 AAGGGGCTG-ATG
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 I 229
s Cercocebus_atys.KQ010443.1                              6556931 12 +   6739814 AAGGGGCTC-ATA
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      28405 12 +     60454 AAGGGGCTC-ATA
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          3612 12 -     21101 AAGGGGCTC-ATA
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         60922 12 -    107033 AAGGGGCTC-ATA
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        3805 12 -     17608 AAGAGGCTC-ATA
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                           964 12 +     45019 AAGGGGCTC-ATA
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           1048 12 +     15177 AAGGGGCTC-ATA
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          3848 12 +     16677 AAGGGGCTC-ATA
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           26018 12 +     35983 AAGGGGCTC-ATA
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11992546 12 +  12117833 AAGGGGCTC-ATA
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46479304 12 +  46592721 AAGGGGCTC-ATA
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      42858 12 -     45581 AAGGGGCTC-ATA
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       3860 12 +     35577 AAGGGGCTC-ATA
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        3633 12 -     25661 AAGAGGCTC-ATA
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        3612 12 -     17744 AAGGGGCTC-ATA
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        23218 12 +     37128 AAGGGGCTC-ATA
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           4041 10 -      6963 --GGG-GTGAGTA
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 I 456
s Cheirogaleus_major.k141_1157592                           60222 12 -     68416 AAGGGGTTC-ATA
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                            9274 12 +     13308 AAGGGGTTC-ATA
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             6986 12 -     18223 AAGGGGCTT-ATG
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             24004 12 +     25473 AAGGGGCTT-ATG
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           43044 12 +     57117 AAGGGGCTT-ATG
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          47723 12 +     54541 AAGGGGCTT-ATG
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15963000 10 +  43084221 AAAGGAATC---A
i Chinchilla_lanigera.JH721867.1                        C 0 I 234
s Chiropotes_israelita.k141_1189915                         72526 12 +    196370 AAGGGGCTT-ATA
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          16706 12 +     40510 AAGGGGCTT-ATA
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15141215 12 -  15256731 AAGGGGCTC-ATA
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      35824 12 -     53260 AAGGGGCTC-ATA
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101146383 12 + 101219884 AAGGGGCTC-ATA
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                17782  9 -     21363 --TGG-GTG-ATA
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 I 232
s Choloepus_hoffmanni.KN194586.1                           763087  9 +    964067 --TGG-GTG-ATA
i Choloepus_hoffmanni.KN194586.1                        C 0 I 232
s Colobus_angolensis.KN985967.1                          10888368 12 +  10971483 AAGGGGCTC-ATA
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147666296 12 + 156195979 AAGGGGCTC-ATA
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            18279 12 +     23629 AAGGGGCTC-ATA
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60620855 12 +  78930452 AAATGGCTT-ATT
i Condylura_cristata.JH655880.1                         C 0 I 918
s Crocidura_indochinensis.CroInd_scaffold_848148              825  9 +      1327 AAGACATT----T
i Crocidura_indochinensis.CroInd_scaffold_848148        C 0 I 212
s Cryptoprocta_ferox.CryFer_flattened_line_19014            53332 12 -     70449 AACGGGCTC-ATA
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 I 221
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 32357 12 -     67205 AAAGAACTT-ACA
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 I 222
s Dasypus_novemcinctus.JH568778.1                          184898  9 -   6883506 --GGG-GTG-GTA
i Dasypus_novemcinctus.JH568778.1                       C 0 I 213
s Daubentonia_madagascariensis.ctg11                     16846087 12 +  31942871 AAAGGGCTC-ATA
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80038291 12 -  96802777 AAGGGGCTC-ATA
i Delphinapterus_leucas.KZ290064.1                      C 0 I 220
s Desmodus_rotundus.KZ672188.1                           18700290 12 -  18957592 AAGGGGCTC-ATA
i Desmodus_rotundus.KZ672188.1                          C 0 I 214
s Dicerorhinus_sumatrensis.PEKH010003161.1                 323845 12 +    993696 AAGGGGCTG-ATG
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 I 229
s Diceros_bicornis.DicBicMic_scaffold_9545                   4482 12 +    151128 AAGGGGCTA-ATG
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 I 229
s Dinomys_branickii.DinBra_scaffold_1996                   158197 12 +    228994 AAAGGACTA-ATA
i Dinomys_branickii.DinBra_scaffold_1996                C 0 I 232
s Eidolon_helvum.KE772537.1                                 13564 12 +     24177 AAGGGTTTC-ATG
i Eidolon_helvum.KE772537.1                             C 0 I 221
s Elaphurus_davidianus.JRFZ01086400.1                     1493027 12 +   1727528 AAGGGTATC-ATA
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 I 221
s Elephantulus_edwardii.JH947210.1                        7830023 12 +  15467074 AGAGGTCTA-CCT
i Elephantulus_edwardii.JH947210.1                      C 0 I 1277
s Enhydra_lutris.KZ291749.1                              85873415 12 +  99434291 AAGGTGCTC-ATA
i Enhydra_lutris.KZ291749.1                             C 0 I 230
s Eptesicus_fuscus.JH977687.1                             4708244 12 +   6522550 AAGGGGCTT-ATA
i Eptesicus_fuscus.JH977687.1                           C 0 I 172
s Equus_asinus.JREZ01000062.1                             5854481 12 -   7175178 AAGGGGCTG-ATA
i Equus_asinus.JREZ01000062.1                           C 0 I 231
s Equus_caballus.CM000402.2                              13352981 12 +  41866177 AAGGGGCTG-ATA
i Equus_caballus.CM000402.2                             C 0 I 231
s Equus_przewalskii.ATBW01073585.1                          14471 12 +     92910 AAGGGGCTG-ATA
i Equus_przewalskii.ATBW01073585.1                      C 0 I 231
s Erinaceus_europaeus.JH835290.1                         11641760 11 +  16010500 AATCCA-TT-CTT
i Erinaceus_europaeus.JH835290.1                        C 0 N 0
s Erythrocebus_patas.Contig8                             48778394 12 -  48907691 AAGGGGCTC-ATA
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          316509 12 +    330699 AAGGGGCTC-ATA
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 I 213
s Eubalaena_japonica.EubJap_flattened_line_7756             62963 12 +     89355 AAGGGGCTC-ATA
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 I 219
s Eulemur_albifrons.k141_715837                              6261 12 +     13586 AAGGGGTTC-ATA
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_311830                               6193 12 -      6809 AAGGGGTTC-ATA
i Eulemur_collaris.k141_311830                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            12667 12 +     36558 AAGGGGTTC-ATA
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                             8984 12 +     60246 AAGGGGTTC-ATA
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                12466 12 +    109717 AAGGGGTTC-ATA
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                  451 12 -     19505 AAGGGGTTC-ATA
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                17126 12 +     27497 AAGGGGTTC-ATA
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           19582 12 +     26808 AAGGGGTTC-ATA
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                34320 12 +     46535 AAGGGGTTC-ATA
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              17046 12 -     29447 AAGGGGTTC-ATA
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129894247 12 - 159252932 AAGGGGCTC-ATA
i Felis_catus.CM001386.2                                C 0 I 222
s Felis_catus_fca126.CM031420.1                         129281331 12 - 158578461 AAGGGGCTC-ATA
i Felis_catus_fca126.CM031420.1                         C 0 I 222
s Felis_nigripes.FelNig_flattened_line_8080                 22469 12 +     52776 AAGGGGCTC-ATA
i Felis_nigripes.FelNig_flattened_line_8080             C 0 I 222
s Fukomys_damarensis.KN123630.1                          13892661 12 -  19261668 AAAGGATTC-ATA
i Fukomys_damarensis.KN123630.1                         C 0 I 230
s Galago_moholi.ctg555                                     212124 12 -    847004 ACAGGGCCC-ACA
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           14495 12 -     43889 ATGGGGCCC-ACA
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          11563 12 +     27357 ACGGGGCCC-ACA
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    182822 12 -    189561 AAGGGTATC-ATA
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 I 216
s Glis_glis.GliGli_scaffold_79770                           15068 12 -     18683 GAAGGGTTC-ATA
i Glis_glis.GliGli_scaffold_79770                       C 0 I 195
s Gorilla_beringei.k141_111300                               6972 12 -     14630 AAGGGGTTC-ATA
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119654072 12 - 195582420 AAGGGGTTC-ATA
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   78480 12 +    118900 CAAAGGCTC-ATA
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 I 220
s Hapalemur_alaotrensis.k141_1280836                         3051 12 +     10286 AAGAGGTTC-ATA
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             1531 12 -     11661 AAGAGGTTC-ATA
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             6857 12 +     56096 AAGAGGTTC-ATA
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        30106 12 -     42470 AAGAGGTTC-ATA
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        46734 12 -     54384 AAGAGGTTC-ATA
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              18527 12 +     53719 AAGGGGCGC-ATA
i Helogale_parvula.HelPar_flattened_line_22962          C 0 I 225
s Hemitragus_hylocrius.HemHyl_scaffold_16669                29046 12 -     91191 AAGGGTATC-ATA
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 I 214
s Heterocephalus_glaber.JH602058.1                        2552381 12 +  31725842 AAAGGATTC-ATA
i Heterocephalus_glaber.JH602058.1                      C 0 I 688
s Hippopotamus_amphibius.HipAmp_scaffold_1308              148381 12 +    277961 AAGGGGATC-ATA
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 I 224
s Hipposideros_armiger.JXIK01001085.1                      279696 12 -    477199 AAGGGGCTC-ATA
i Hipposideros_armiger.JXIK01001085.1                   C 0 I 222
s Hipposideros_galeritus.HipGal_scaffold_345408               693 12 -       919 AAGGGGCTC-AGA
i Hipposideros_galeritus.HipGal_scaffold_345408         C 0 n 0
s Hoolock_leuconedys.ctg79                                      6662 12 -   7690867 AAGGGGTTC-ATA
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 18597 12 -     67322 AAGGGGCTC-ATA
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 I 227
s Hylobates_abbotti.k141_164775                              1445 12 -      2073 AAGTGGTTC-ATA
i Hylobates_abbotti.k141_164775                         C 0 C 0
s Hylobates_agilis.k141_55853                                1030 12 -      1487 AAGGGGTTC-ATA
i Hylobates_agilis.k141_55853                           I 187 I 9
s Hylobates_klossii.k141_183401                               998 12 -      1272 AAGGGGTTC-ATA
i Hylobates_klossii.k141_183401                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14626350 12 -  25970782 AAGGGGTTC-ATA
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_950183                             1046 12 +      2027 AAGGGGTTC-ATA
i Hylobates_muelleri.k141_950183                        C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             35510 12 -     60944 AAGGGGTTC-ATA
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     7456 12 +     22540 AGACGACTC-ATA
i Hystrix_cristata.HysCri_scaffold_50788                C 0 I 219
s Ictidomys_tridecemlineatus.JH393315.1                   7127298 12 +  13083262 TAAGGGTGT-ATA
i Ictidomys_tridecemlineatus.JH393315.1                 I 1 I 201
s Indri_indri.k141_5141390                                   1583 12 -      3181 AAGGGGTTT-ATG
i Indri_indri.k141_5141390                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              10498 12 +     17520 AAGGGGCTC-ATA
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 I 223
s Kogia_breviceps.KogBre_flattened_line_35920               25101 12 +     37189 AAGGGGCTC-AAA
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 I 209
s Lagothrix_lagothricha.k141_12968                          51566 12 -    147782 AAGTGGCTT-ATA
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lemur_catta.scaffold_1                                258408409 12 - 285822530 AAGAGGTTC-ATA
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        25160 12 +     39228 AAGGGATTC-ATA
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            54546 12 +     63517 AAGGGATTC-ATA
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_617879                        79808 12 +    116806 AAGGGATTC-ATA
i Lepilemur_ruficaudatus.k141_617879                    C 0 C 0
s Lepilemur_septentrionalis.k141_578524                     32799 12 -     33031 AAGGGATTC-ATA
i Lepilemur_septentrionalis.k141_578524                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3087278 12 -   3498232 AAGGAGCTC-GTA
i Leptonychotes_weddellii.KB714749.1                    C 0 I 235
s Lepus_americanus.LepAme_scaffold_62849                    15244 12 +     22452 CAGAGACTC-CTA
i Lepus_americanus.LepAme_scaffold_62849                I 310 I 223
s Lipotes_vexillifer.KE558548.1                            137454 12 +   3060487 AAGGGGCTC-ATA
i Lipotes_vexillifer.KE558548.1                         C 0 I 219
s Lophocebus_aterrimus.ctg55                             19250018 12 +  19376315 AAGGGGCTC-ATA
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           11846 12 +     84689 ACGGGGCTC-ACA
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3779595 12 +   6799190 ACGGGGCTC-ACA
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20596434 12 -  62548349 AAGGACCTC-CTA
i Loxodonta_africana.GL010040.1                         C 0 I 235
s Lycaon_pictus.CM007556.1                               11089671 12 +  39895028 AAGGTGCTC-ATA
i Lycaon_pictus.CM007556.1                              C 0 I 228
s Macaca_arctoides.k141_2201161                             21769 12 +     74745 AAGGGGCTC-ATA
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12708229 12 +  12821369 AAGGGGCTC-ATA
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                 807 12 -     26467 AAGGGGCTC-ATA
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           48674 12 +     63263 AAGGGGCTC-ATA
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                  784 12 -     26361 AAGGGGCTC-ATA
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 3961 12 -      7381 AAGGGGCTC-ATA
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  47199 12 -     79256 AAGGGGCTC-ATA
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196037301 12 + 196197964 AAGGGGCTC-ATA
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11447467 12 +  11645122 AAGGGGCTC-ATA
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   6153 12 -     46448 AAGGGGCTC-ATA
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                3819 12 -     13212 AAGGGGCTC-ATA
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 17496 12 -     55006 AAGGGGCTC-ATA
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43842602 12 +  43892939 AAGGGGCTC-ATA
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               18783 12 -     24607 AAGGGGCTC-ATA
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               6150 12 -     27140 AAGGGGCTC-ATA
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                702280 12 +    802869 AAGGGGCTC-ATG
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 I 215
s Mandrillus_leucophaeus.scaffold125                     43439180 12 -  43563597 AAGGGGCTC-ATA
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4451994 12 -   4543643 AAGGGGCTC-ATA
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            147349 12 +    252755 AAAGGGCtc-ata
i Manis_javanica.JSZB01003966.1                         C 0 I 229
s Manis_pentadactyla.KN017078.1                             37492 12 +     58827 AAAGGGCTC-ATA
i Manis_pentadactyla.KN017078.1                         C 0 I 229
s Marmota_marmota.CZRN01000005.1                         36875206 12 +  64221397 TAAGGGTTT-ATA
i Marmota_marmota.CZRN01000005.1                        I 1 I 201
s Mellivora_capensis.MelCap_flattened_line_15433             2314 12 -     87323 AAGGTGCTC-ATA
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 I 230
s Mesoplodon_bidens.MesBid_scaffold_96348                      85 12 -     12939 AAGGGGCTC-ATA
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 I 220
s Microcebus_murinus.CM007691.1                          16511443 12 +  47401472 AAGGGGTTC-ATA
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  39609 12 -     48017 AGTTATATT-CTA
i Microgale_talazaci.MicTal_scaffold_34660              C 0 I 260
s Micronycteris_hirsuta.MicHir_scaffold_37978               24167 12 -     32043 AAGGGGCTC-ATG
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 I 207
s Miniopterus_natalensis.LDJU01000022.1                   8212287 12 +  10048721 AAGGGGCCC-ATA
i Miniopterus_natalensis.LDJU01000022.1                 C 0 I 209
s Miniopterus_schreibersii.MinSch_scaffold_24116            36776 12 +     45743 AAGGGGCCC-ATA
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 I 209
s Miopithecus_ogouensis.k141_2935907                         3745 12 +     29742 AAGGGGCTC-ATA
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        12804 12 -    104932 AAGGTGCTC-GTA
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 I 234
s Mirza_zaza.k141_226143                                     6832 12 +      8497 AAGGGGTTC-ATA
i Mirza_zaza.k141_226143                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 147881 12 +    154973 AAGGGGCTC-ATA
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 I 220
s Mormoops_blainvillei.MorMeg_scaffold_2952                162713 12 +    265003 AAGGGGCTC-ATA
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 I 211
s Moschus_moschiferus.MosMos_scaffold_78805                  3070 12 -     19904 AAGGCTATC-ATA
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 I 210
s Mungos_mungo.MunMun_flattened_line_8729                  146226 12 -    168139 AAGGGGCTC-ATA
i Mungos_mungo.MunMun_flattened_line_8729               C 0 I 225
s Murina_feae.MurFea_scaffold_2254                          23719 12 -    100666 AAGGGACTC-ATA
i Murina_feae.MurFea_scaffold_2254                      C 0 I 168
s Muscardinus_avellanarius.MusAve_scaffold_9643             13579 12 +     98495 GAGGAGCTT-ATA
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 I 239
s Mustela_putorius.JH417978.1                             4425679 12 -  28371801 AAGGTGCTC-ATA
i Mustela_putorius.JH417978.1                           C 0 I 229
s Myocastor_coypus.MyoCoy_scaffold_3653                     91683 12 -    117718 AAAGAACTT-GTA
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 I 224
s Myotis_brandtii.KE161952.1                               970584 12 +   8389877 AAGGGGTTC-ATA
i Myotis_brandtii.KE161952.1                            C 0 I 172
s Myotis_davidii.KB114863.1                               5022009 12 +   6462685 AAAGGGCTC-ATA
i Myotis_davidii.KB114863.1                             C 0 I 172
s Myotis_lucifugus.GL429887.1                             3468087 12 -   3747815 AAGGGGCTC-ATA
i Myotis_lucifugus.GL429887.1                           C 0 I 172
s Myotis_myotis.MyoMyo_scaffold_6123                        13330 12 +     66751 AAGGGGGTC-ATA
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 I 172
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             6347 11 -      8794 AGGGG-GTG-ATA
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 I 230
s Nasalis_larvatus.k141_153429                              10218 12 +     48152 AAGGGGCTC-AGA
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4486195 12 -  14209539 AAGGTGCTC-GTA
i Neomonachus_schauinslandi.NINY01007774.1              C 0 I 235
s Neophocaena_asiaeorientalis.KZ688543.1                  3952493 12 -   4490290 AAGGGGCTC-ATA
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 I 216
s Nomascus_annamensis.k141_224620                             816 12 -      2316 AAGGGGTTC-ATA
i Nomascus_annamensis.k141_224620                       C 0 C 0
s Nomascus_concolor.k141_226614                              2913 12 -      5092 AAGGGGTTC-ATA
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_1032971                            483 12 -      1918 AAGGGGTTC-ATA
i Nomascus_gabriellae.k141_1032971                      C 0 C 0
s Nomascus_siki_b.tarseq_80                             26665 12 -  18771707 AAGGGGTTC-ATA
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  4335 12 +      4512 AAGGGGTTC-ATA
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                32455 12 +   3668941 AAGGTGCTC-ATA
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 I 227
s Nycticebus_bengalensis.LG16                            65568300 12 -  95554990 ACAGTGCTC-ACA
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_2051882                            5026 12 +      6470 ACAGTGCTC-ACA
i Nycticebus_coucang.k141_2051882                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65670633 12 +  89412551 ACAGTGCTC-ACA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Octodon_degus.JH651621.1                                3687184 12 +  10294119 AAAGGACTT-GTA
i Octodon_degus.JH651621.1                              C 0 I 223
s Odobenus_rosmarus.KB229369.1                             680857 12 -   3126709 AAGGTGCTC-GTA
i Odobenus_rosmarus.KB229369.1                          C 0 I 235
s Odocoileus_virginianus.KZ101650.1                       1081246 12 +   1425656 AAGGGTATC-ATG
i Odocoileus_virginianus.KZ101650.1                     C 0 I 216
s Okapia_johnstoni.LVCL01S0017931.1                         38549 12 +     78940 AAGGATATC-ATA
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 I 211
s Orcinus_orca.KB316965.1                                 7226178 12 -   7562323 AAGGGGCTC-ATA
i Orcinus_orca.KB316965.1                               C 0 I 220
s Orycteropus_afer.OryAfe_flattened_line_13509              61384 12 -     66828 AGGGATTTC-CTT
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 I 234
s Oryctolagus_cuniculus.CM000803.1                      141878279 12 + 163896628 gagagactt-cTA
i Oryctolagus_cuniculus.CM000803.1                      I 310 I 224
s Otocyon_megalotis.JAEUCK010005121.1                      309748 12 -    505867 AAGGTGCTC-ATA
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 I 228
s Otolemur_crassicaudatus.k141_505435                        1939 12 -     53940 ACGGGGCCC-ACA
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18009920 12 -  38779656 ACGGGGCCC-ACA
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134078838 12 - 275406953 AAGGGTATC-ATA
i Ovis_aries.CM001582.2                                 C 0 I 214
s Ovis_canadensis.OviCan_scaffold_6251                      80052 12 +    140051 AAGGGTATC-ATA
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 I 214
s Panthera_onca.PanOnc_flattened_line_1615                  35614 12 +    295523 AAGGGGCTC-ATA
i Panthera_onca.PanOnc_flattened_line_1615              C 0 I 222
s Panthera_pardus.KV860323.1                              3639364 12 +  18214204 AAGGGGCTC-ATA
i Panthera_pardus.KV860323.1                            C 0 I 222
s Panthera_tigris.KE721879.1                              5029040 12 -   6340057 AAGGGGCTC-ATA
i Panthera_tigris.KE721879.1                            C 0 I 222
s Pantholops_hodgsonii.KE114631.1                         1067697 12 -   1292953 AAGGGTATC-ATA
i Pantholops_hodgsonii.KE114631.1                       C 0 I 217
s Papio_anubis.CM001492.2                               188157981 12 - 188283584 AAGGGGCTC-ATA
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              1073 12 +     25005 AAGGGGCTC-ATA
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47515355 12 +  47705337 AAGGGGCTC-ATA
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 69345 12 -    104429 AAGGGGCTC-ATA
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    7874 12 +     14967 AAGGGGCTC-ATA
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 3739 12 -      7628 AAGGGGCTC-ATA
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    117104 12 -    135482 AAGGGGCTC-ATA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 I 227
s Perodicticus_ibeanus.k141_117958                           6623 12 -     23713 ACAGGGCTC-ACA
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_713187                            25937 12 -     27972 ACGGGGCTC-ACA
i Perodicticus_potto.k141_713187                        C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    14886  1 -     36578 A------------
i Petromus_typicus.PetTyp_scaffold_33007                C 0 I 226
s Phocoena_phocoena.PhoPho_flattened_line_53071               636 12 +      8220 AAGGGGCTC-ATA
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 I 216
s Piliocolobus_badius.k141_1987485                           3751 12 -      5908 AAGGGCCTC-ATA
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       4369 12 -     17985 AAGGGCCTC-ATA
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            3736 12 +      7694 AAGGGCCTC-ATA
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26742220 12 +  26888534 AAGGGCCTC-ATA
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pithecia_albicans.k141_991845                             45168 12 -     61926 AAGGGGCTT-ATA
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        26551 12 +     78826 AAGGGGCTT-ATA
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                             10599 12 -     15800 AAGGGGCTT-ATA
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        13798 12 -     16101 AAGGGGCTT-ATA
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          7027 12 +      9673 AAGGGGCTT-ATA
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13476027 12 -  19735023 AAGGGGCTT-ATA
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           14930 12 -     31692 AAGGGGCTT-ATA
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           7098 12 +     21690 AAGGGGCTC-ATA
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 I 220
s Plecturocebus_bernhardi.k141_959214                       24265 12 +     44506 AAGGGGCTT-ATA
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        24478 12 +     67491 AAGGGGCTT-ATA
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      14717 12 -     98129 AAGGGGCTT-ATA
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     24317 12 +    147771 AAGGGGCTT-ATA
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                          953 12 -     43940 AAGGGGCTT-ATA
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          5036 12 -     55515 AAAGGGCTT-ATA
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         24390 12 +    152463 AAGGGGCTT-ATA
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       2107 12 -    119457 AAGGGGCTT-ATA
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         14113 12 +    134592 AAGGGGCTT-ATA
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          24700 12 -     75465 AAGGGGCTT-ATA
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              188857 12 -    373494 AAGGGGTTC-ATA
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19809504 12 +  19899266 AAGGGGTTC-ATA
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               7498 12 -     15069 AAGGGGCTC-AGA
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              7613 12 +     14865 AAGGGGCTC-AGA
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6849780 12 +  12164890 AAGAGGTTC-ATA
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     19954 12 -     30946 nnnnnnnnn-nnn
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         4857 12 +     11805 AAGGGGTTT-ATG
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           44205 12 +     52369 AAGGGGTTT-ATG
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         36592 12 -     44753 AAGGGGTTT-ATG
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            18515 12 +     27322 AAGGGGTTT-ATG
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       18149 12 -     53241 AAGGGGTTT-ATG
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         40413 12 -     48185 AAGGGGTTT-ATG
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Pteronotus_parnellii.KE867983.1                            5363 12 -     27784 AAGGGATTC-ATG
i Pteronotus_parnellii.KE867983.1                       C 0 I 212
s Pteronura_brasiliensis.PteBra_flattened_line_1343        247990 12 -    344369 AAGGTGCTC-ATA
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 I 230
s Pteropus_alecto.KB031157.1                             13247285 12 -  17261082 AAGGGGTTC-ATG
i Pteropus_alecto.KB031157.1                            C 0 I 221
s Pteropus_vampyrus.KN525959.1                             605235 12 -   3946241 AAGGGGTTC-ATG
i Pteropus_vampyrus.KN525959.1                          C 0 I 221
s Puma_concolor.QAVW01000427.1                          131535636 12 - 161321710 AAGGGGCTC-ATA
i Puma_concolor.QAVW01000427.1                          C 0 I 222
s Pygathrix_cinerea.k141_374971                             31602 13 +     56732 AAGGGGCTCCAGA
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6808100 12 +   6970761 AAGGGACTC-AGA
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             7489 12 +     18040 AAGGGACTC-AGA
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                17358 12 +     68503 AAGGGTATC-ATG
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 I 216
s Rhinolophus_sinicus.LVEH01000179.1                      1789162 12 +   2252614 AAGGCGCTC-CTA
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 I 233
s Rhinopithecus_bieti.k119_554384                            1885 12 -     17045 AAGGGGCTC-AGA
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206379373 12 - 206558726 AAGGGGCTC-AGA
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44858275 12 -  45163003 AAGGGGCTC-AGA
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                20621 12 +    109198 AAGAGGCTC-ATG
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 I 219
s Saiga_tatarica.SaiTat_scaffold_82192                       9525 12 +     12214 AAGGGTATC-ATA
i Saiga_tatarica.SaiTat_scaffold_82192                  C 0 I 216
s Saimiri_boliviensis.NW_024100938.1                     15674119 12 -  43202129 AAGGGGCtt-ata
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        6032 12 +     34089 AAGGGGCTT-ATA
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              5974 12 -     60842 AAGGGGCTT-ATA
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              6067 12 +     67014 AAGGGGCTT-ATA
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              6045 12 +     60816 AAGGGGCTT-ATA
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 5982 12 -     76454 AAGGGGCTT-ATA
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17342714 12 -  30362882 AAGGGGCTT-ATA
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         22075 12 -     62485 AAGGGGCTT-ATA
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   37989 12 -    114521 AAATGGCTT-ATT
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 I 1220
s Semnopithecus_entellus.k141_1572367                        5105 12 +     15331 AAGGGGCTC-AGA
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      10480 12 +     20762 AAGGGGCTC-AGA
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         120485 12 +    130994 AAGGGGCTC-AGA
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           39264 12 +     46263 AAGGGGCTC-AGA
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     32409 12 +     42640 AAGGGGCTC-AGA
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        15431 12 +     30600 GAGGGGCTC-AGA
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            20174  9 +    739146 AAGGGACTC----
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 I 1034
s Sorex_araneus.JH798170.1                               17767732  9 -  27805282 AAGAAGTT----G
i Sorex_araneus.JH798170.1                              C 0 I 384
s Spermophilus_dauricus.KZ294190.1                        2241215 12 +   2842873 TAAGGGTGT-ATA
i Spermophilus_dauricus.KZ294190.1                      I 1 I 201
s Suricata_suricatta.SurSur_flattened_line_20339            28885 12 +     62062 AAGGGGCTC-ATA
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 I 220
s Sus_scrofa.CM000824.4                                 189273390 12 + 218635234 AAAAGGCTC-ATT
i Sus_scrofa.CM000824.4                                 C 0 I 267
s Symphalangus_syndactylus.tarseq_24                        16609 12 -  13920577 AAGGGGTTC-ATA
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                1592 12 +     20549 AAGGGGCTC-ATA
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 I 217
s Tamandua_tetradactyla.TamTet_scaffold_26877               16015 11 +     45698 AGGGG-GTG-ATA
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 I 232
s Tapirus_indicus.TapInd_scaffold_176                      808433 12 +   1148477 AAGGGGCTT-ACA
i Tapirus_indicus.TapInd_scaffold_176                   C 0 I 225
s Tapirus_terrestris.TapTer_scaffold_14939                  59146 12 +     99546 AAGGGGCTT-ACA
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 I 225
s Theropithecus_gelada.CM009951.1                       194009512 12 - 194193292 AAGGGGCTC-ATA
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             40382  1 -     47444 A------------
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 I 206
s Tolypeutes_matacus.TolMat_scaffold_1305119                  192 10 -       594 --GGG-GTGGATA
i Tolypeutes_matacus.TolMat_scaffold_1305119            C 0 I 234
s Tonatia_saurophila.TonSau_scaffold_3334                  137338 12 -    259118 AAGGGGCTC-ATA
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 I 212
s Trachypithecus_auratus.k141_738098                        28752 12 +     38948 AAGGGGCTC-AGA
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   22312 12 -     32910 AAGGGGCTC-AGA
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      4213 12 -     12939 AAGGGGCTC-AGA
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       3641 12 -     14244 AAGGGGCTC-AGA
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           45034 12 -     54611 AAGGGGCTC-AGA
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        2835 12 -     11566 AAGGGGCTC-AGA
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     5019 12 -     15592 AAGGGGCTC-AGA
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          3671 12 +     14371 AAGGGGCTC-AGA
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   1957 12 +     12481 AAGGGGCTC-AGA
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        1938 12 -     24393 AAGGGGCTC-AGA
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       7082 12 -     28054 AAGGGGCTC-AGA
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44661866 12 -  44834318 AAGGGGCTC-AGA
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       4178 12 +     13828 AAGGGGCTC-AGA
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   6716 12 +     90398 AAGGGGCTC-AGA
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 I 217
s Trichechus_manatus.JH594618.1                          16087429 12 +  31416278 GGGAATATC-CTA
i Trichechus_manatus.JH594618.1                         C 0 I 236
s Tupaia_chinensis.KB320831.1                             2794759 12 -   3938065 AAAGGACTC-ACA
i Tupaia_chinensis.KB320831.1                           C 0 I 245
s Tupaia_tana.TupTan_flattened_line_68454                    6864 12 +     13056 AAAGGACTC-ACA
i Tupaia_tana.TupTan_flattened_line_68454               C 0 I 245
s Tursiops_truncatus.MRVK01000923.1                      69314895 12 -  96451834 AAGGGGCTC-ATA
i Tursiops_truncatus.MRVK01000923.1                     C 0 I 220
s Uropsilus_gracilis.UroGra_scaffold_69449                   8558 12 +     10241 AAATAACTT-ATT
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 I 1192
s Ursus_maritimus.KK498671.1                              6516113 12 +  28682327 AAGGCGCTC-ACA
i Ursus_maritimus.KK498671.1                            C 0 I 231
s Varecia_rubra.k141_432109                                  6415 12 -     20643 AAGGGGTTC-ATA
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             25950 12 -     33872 AAGGGGTTC-ATA
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1525915 11 -   2331223 AAGAGGCTC-A-A
i Vicugna_pacos.KN269600.1                              C 0 I 228
s Vulpes_lagopus.VulLag_flattened_line_2045                139850 12 -    281493 GAGGTGCTC-ATA
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 I 228
s Xerus_inauris.XerIna_scaffold_7898                       128168 12 -    134049 TAAGGGTTT-GTA
i Xerus_inauris.XerIna_scaffold_7898                    C 0 I 219
s Zalophus_californianus.ZalCal_flattened_line_4097        215592 12 -    227762 AAGGTTCTC-GTA
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 I 235
s Ziphius_cavirostris.ZipCav_flattened_line_127025           8393 12 -      8775 AAGGGGCTC-ATA
i Ziphius_cavirostris.ZipCav_flattened_line_127025      C 0 I 220
e Ochotona_princeps.JH802095.1                            4996729 2205 -  23139505 I
e Perognathus_longimembris.PerPac_flattened_line_19359       1614 38 +     49596 I
e Dipodomys_stephensi.DipSte_scaffold_84338                  1789 28 -     11986 I
e Dipodomys_ordii.KN672545.1                              3659429 30 +   4240102 I
e Spilogale_gracilis.SpiGra_flattened_line_905             236262 1976 -    276980 I
e Procavia_capensis.ProCapCap_scaffold_149274                2467 1156 -      9567 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Megaderma_lyra.MegLyr_scaffold_3562                       64783 239 -    234502 I
e Lasiurus_borealis.LasBor_scaffold_59542                    4882 159 +     26176 I
e Heterohyrax_brucei.HetBruBak_scaffold_25354               61360 1157 +     73687 I
e Echinops_telfairi.JH980316.1                           22999931  2 -  44670279 I
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1008 325 -      5782 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19677 266 -    119109 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     17701 105 -     20485 I
e Jaculus_jaculus.JH727545.1                                 2470 323 -      4668 I
e Allactaga_bullata.AllBul_scaffold_70162                   19523 1880 -     22067 I
e Galeopterus_variegatus.GalVar_scaffold_354               157483 1695 +    324696 I
e Microtus_ochrogaster.CM001673.1                        22821073 2807 -  98408828 I
e Tarsius_wallacei.k141_48636                               60532 3805 +     65473 I
e Tarsius_lariang.k141_609102                               27216 3812 +     42269 I
e Sigmodon_hispidus.SigHis_scaffold_11332                  101684 3004 -    120886 I
e Rattus_norvegicus.chr11                                13915860 1475 +  90463843 I
e Psammomys_obesus.NESX01026517.1                           36723 1197 +     77221 I
e Peromyscus_maniculatus.KI615518.1                       4951906 3218 -   8017169 I
e Onychomys_torridus.OnyTor_scaffold_12578                  38526 4229 +     62360 I
e Ondatra_zibethicus.OndZib_scaffold_6821                  126338 3732 +    145789 I
e Nannospalax_galili.KL201303.1                            119252 614 +    362372 I
e Mus_spretus.CM004110.1                                 74333573 2703 +  97876770 I
e Mus_pahari.LT608305.1                                  67557037 2889 +  89017189 I
e Mus_musculus.chr16                                     75490838 2711 +  98207768 I
e Mus_caroli.LT608236.1                                  70767758 3738 +  92629107 I
e Mesocricetus_auratus.KB708139.1                         1048323 2868 -  26018355 I
e Meriones_unguiculatus.MerUng_scaffold_52233               14635 934 +     15977 I
e Ellobius_lutescens.LOEQ01003611.1                        240703 2767 -    369425 I
e Dolichotis_patagonum.DolPat_scaffold_14102                36772 276 -     73477 I
e Dasyprocta_punctata.DasPun_flattened_line_634             59553 276 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                18462 277 +     26546 I
e Ctenodactylus_gundi.CteGun_scaffold_447                  209506 3013 -    956709 I
e Cricetulus_griseus.LT883672.1                          53031727 2939 +  72327488 I
e Cricetomys_gambianus.CriGam_scaffold_949                 279623 2673 -    399297 I
e Cephalopachus_bancanus.k141_702587                         8788 3391 +     21754 I
e Cavia_tschudii.CavTsc_scaffold_488                       177453 271 +    436027 I
e Cavia_porcellus.DS562889.1                             15799262 290 -  24440124 I
e Cavia_aperea.AVPZ01000278.1                            15787326 288 -  24422027 I
e Carlito_syrichta.NW_007248099.1                          309764 3411 +    345090 I
e Acomys_cahirinus.AcoCah_scaffold_1625                    115109 2323 -    189883 I
e Pan_paniscus.CM003386.1                               127575888 480 - 205426864 I
e Pan_troglodytes.CM009241.2                            120153042 480 - 196562556 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               15270 1 +    209709 A
s Acinonyx_jubatus.LLWD01000356.1                         2035509 1 +   3721120 a
i Acinonyx_jubatus.LLWD01000356.1                       I 222 I 3396
s Ailuropoda_melanoleuca.LNAT01000321.1                  10659085 1 +  23371972 a
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 231 I 3502
s Ailurus_fulgens.LNAC01000003.1                          7096221 1 -  16596857 a
i Ailurus_fulgens.LNAC01000003.1                        I 232 I 3152
s Allenopithecus_nigroviridis.k141_2469532                   3000 1 -     60446 A
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         3717 1 -     29318 A
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         2653 1 +     38766 A
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          3611 1 -     80423 A
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            11598 1 -     18050 A
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_664908                                  13 1 -     12443 A
i Alouatta_caraya.k141_664908                           n 1 I 570
s Alouatta_discolor.k141_811576                             12271 1 -     21359 A
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                1894 1 +      2129 A
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_2177643                          1271 1 -      1868 A
i Alouatta_macconnelli.k141_2177643                     C 0 C 0
s Alouatta_nigerrima.k141_3537692                            1320 1 +      1660 A
i Alouatta_nigerrima.k141_3537692                       C 0 C 0
s Alouatta_palliata.k141_2764429                             1240 1 -      1480 A
i Alouatta_palliata.k141_2764429                        C 0 C 0
s Alouatta_puruensis.k141_131505                              527 1 +      4855 A
i Alouatta_puruensis.k141_131505                        C 0 C 0
s Alouatta_seniculus.k141_1531728                            1455 1 -      1692 A
i Alouatta_seniculus.k141_1531728                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3521925 1 +   4113121 a
i Ammotragus_lervia.NIVO01013474.1                      I 216 I 3185
s Anoura_caudifer.AnoCau_scaffold_422                      392019 1 -    631301 a
i Anoura_caudifer.AnoCau_scaffold_422                   I 212 I 257
s Antilocapra_americana.AntAmePen_scaffold_42841            32506 1 +     33004 a
i Antilocapra_americana.AntAmePen_scaffold_42841        I 217 N 0
s Aotus_azarae.k141_3170768                                 63940 1 +     78111 A
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            6883 1 +     22701 A
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5750840 1 +   9889416 A
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             7429 1 -    104377 A
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               7431 1 +     23246 A
i Aotus_vociferans.k141_718647                          C 0 C 0
s Arctocebus_calabarensis.k141_587554                        2230 1 +      9265 G
i Arctocebus_calabarensis.k141_587554                   C 0 I 2476
s Artibeus_jamaicensis.ArtJam_scaffold_41619                10439 1 -     29036 a
i Artibeus_jamaicensis.ArtJam_scaffold_41619            I 214 I 261
s Ateles_geoffroyi_b.tarseq_2582                             9540707 1 +  39197703 A
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             61980 1 +     85812 A
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                12993 1 +     89302 A
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             17494 1 -     58268 A
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             65488 1 +    119057 A
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               7457 1 -     25888 A
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 7961 1 -     16375 A
i Avahi_laniger.k141_2840928                            C 0 I 1572
s Avahi_peyrierasi.k141_798820                               1577 1 +      6337 A
i Avahi_peyrierasi.k141_798820                          C 0 I 1572
s Balaenoptera_acutorostrata.KI537095.1                  26381894 1 +  51448160 a
i Balaenoptera_acutorostrata.KI537095.1                 I 214 I 1680
s Balaenoptera_bonaerensis.DF502048.1                        7067 1 -     13118 a
i Balaenoptera_bonaerensis.DF502048.1                   I 214 I 1680
s Beatragus_hunteri.BeaHun_scaffold_21644                   45029 1 -     72089 a
i Beatragus_hunteri.BeaHun_scaffold_21644               I 215 I 2543
s Bison_bison.KN264915.1                                  6561652 1 +   6870073 a
i Bison_bison.KN264915.1                                I 216 I 9757
s Bos_indicus.CM003021.1                                138141775 1 - 161108492 a
i Bos_indicus.CM003021.1                                I 217 I 13915
s Bos_mutus.JH883513.1                                     574303 1 -    998990 a
i Bos_mutus.JH883513.1                                  I 216 I 9565
s Bos_taurus.CM000177.6                                 136297508 1 - 158972876 a
i Bos_taurus.CM000177.6                                 I 217 I 13762
s Bubalus_bubalis.KI419065.1                              1234588 1 -   1914593 a
i Bubalus_bubalis.KI419065.1                            I 216 I 7938
s Cacajao_ayresi.k141_724503                               115341 1 -    171031 A
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 14370 1 +    125063 A
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                16413 1 -    216513 A
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        8956 1 -    134917 A
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3221049 1 -   8989139 g
i Camelus_bactrianus.KN276303.1                         I 228 I 1669
s Camelus_dromedarius.KN271192.1                           398750 1 -  15254737 g
i Camelus_dromedarius.KN271192.1                        I 228 I 1670
s Camelus_ferus.KB016973.1                                2974486 1 +   6889770 g
i Camelus_ferus.KB016973.1                              I 228 I 1670
s CanFam4.chr31                                          11521253 1 +  39901454 a
i CanFam4.chr31                                         I 228 I 4498
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   16278 1 +     87036 a
i Canis_lupus_VD.CanFam_VD_scaffold_16982               I 228 I 4447
s Canis_lupus_dingo.QKWQ01001993.1                       11267922 1 -  35597290 a
i Canis_lupus_dingo.QKWQ01001993.1                      I 228 I 4512
s Canis_lupus_familiaris.chr31                           11090455 1 +  39895921 a
i Canis_lupus_familiaris.chr31                          I 228 I 4690
s Canis_lupus_orion.HG994411.1                           16457468 1 -  44759192 a
i Canis_lupus_orion.HG994411.1                          I 228 I 4462
s Capra_aegagrus.CM003214.1                              21326985 1 + 157394656 a
i Capra_aegagrus.CM003214.1                             I 215 I 3205
s Capra_hircus.CM004562.1                               135708202 1 - 157403528 a
i Capra_hircus.CM004562.1                               I 215 I 3205
s Capromys_pilorides.CapPil_scaffold_790727                   328 1 -      1550 T
i Capromys_pilorides.CapPil_scaffold_790727             I 225 N 0
s Carollia_perspicillata.CarPer_scaffold_4436               61225 1 +     67245 a
i Carollia_perspicillata.CarPer_scaffold_4436           I 213 I 261
s Castor_canadensis.CasCan_scaffold_47037                   32554 1 +     33760 A
i Castor_canadensis.CasCan_scaffold_47037               I 211 N 0
s Catagonus_wagneri.CatWag_scaffold_1305                   160654 1 -    276539 t
i Catagonus_wagneri.CatWag_scaffold_1305                I 221 I 1616
s Cavia_aperea.AVPZ01000278.1                            15787614 1 -  24422027 G
i Cavia_aperea.AVPZ01000278.1                           I 288 I 1741
s Cavia_porcellus.DS562889.1                             15799552 1 -  24440124 G
i Cavia_porcellus.DS562889.1                            I 290 I 1742
s Cavia_tschudii.CavTsc_scaffold_488                       177724 1 +    436027 G
i Cavia_tschudii.CavTsc_scaffold_488                    I 271 I 1742
s Cebus_albifrons.Contig22                               18892181 1 -  29618158 A
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 9725 1 -     26817 A
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                13968 1 +     25043 A
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4365434 1 +   7569818 a
i Ceratotherium_simum.JH767818.1                        I 229 I 1722
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         5191 1 -      9338 a
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    I 229 I 1722
s Cercocebus_atys.KQ010443.1                              6556943 1 +   6739814 A
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      28417 1 +     60454 A
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          3624 1 -     21101 A
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         60934 1 -    107033 A
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        3817 1 -     17608 A
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                           976 1 +     45019 A
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           1060 1 +     15177 A
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          3860 1 +     16677 A
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           26030 1 +     35983 A
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11992558 1 +  12117833 A
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46479316 1 +  46592721 A
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      42870 1 -     45581 A
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       3872 1 +     35577 A
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        3645 1 -     25661 A
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        3624 1 -     17744 A
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        23230 1 +     37128 A
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           60234 1 -     68416 A
i Cheirogaleus_major.k141_1157592                       C 0 I 1586
s Cheirogaleus_medius.k141_133808                            9286 1 +     13308 A
i Cheirogaleus_medius.k141_133808                       C 0 I 1578
s Cheracebus_lucifer.k141_619653                             6998 1 -     18223 A
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             24016 1 +     25473 A
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           43056 1 +     57117 A
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          47735 1 +     54541 A
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15963244 1 +  43084221 G
i Chinchilla_lanigera.JH721867.1                        I 234 I 964
s Chiropotes_israelita.k141_1189915                         72538 1 +    196370 A
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          16718 1 +     40510 A
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15141227 1 -  15256731 A
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      35836 1 -     53260 A
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101146395 1 + 101219884 A
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                18023 1 -     21363 a
i Choloepus_didactylus.ChoDid_scaffold_36182            I 232 I 504
s Choloepus_hoffmanni.KN194586.1                           763328 1 +    964067 a
i Choloepus_hoffmanni.KN194586.1                        I 232 I 503
s Colobus_angolensis.KN985967.1                          10888380 1 +  10971483 A
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147666308 1 + 156195979 A
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            18291 1 +     23629 A
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_848148             1046 1 +      1327 T
i Crocidura_indochinensis.CroInd_scaffold_848148        I 212 N 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            53565 1 -     70449 a
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 221 I 3347
s Ctenodactylus_gundi.CteGun_scaffold_447                  212519 1 -    956709 A
i Ctenodactylus_gundi.CteGun_scaffold_447               I 3013 I 1143
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 32591 1 -     67205 T
i Ctenomys_sociabilis.CteSoc_scaffold_19489             I 222 I 1717
s Cuniculus_paca.CunPac_flattened_line_16637                18739 1 +     26546 g
i Cuniculus_paca.CunPac_flattened_line_16637            I 277 I 1705
s Dasyprocta_punctata.DasPun_flattened_line_634             59829 1 -    236241 T
i Dasyprocta_punctata.DasPun_flattened_line_634         I 276 I 1753
s Dasypus_novemcinctus.JH568778.1                          185120 1 -   6883506 a
i Dasypus_novemcinctus.JH568778.1                       I 213 I 383
s Daubentonia_madagascariensis.ctg11                     16846099 1 +  31942871 A
i Daubentonia_madagascariensis.ctg11                    C 0 I 1581
s Delphinapterus_leucas.KZ290064.1                       80038523 1 -  96802777 a
i Delphinapterus_leucas.KZ290064.1                      I 220 I 1681
s Desmodus_rotundus.KZ672188.1                           18700516 1 -  18957592 a
i Desmodus_rotundus.KZ672188.1                          I 214 I 262
s Dicerorhinus_sumatrensis.PEKH010003161.1                 324086 1 +    993696 a
i Dicerorhinus_sumatrensis.PEKH010003161.1              I 229 I 1719
s Diceros_bicornis.DicBicMic_scaffold_9545                   4723 1 +    151128 a
i Diceros_bicornis.DicBicMic_scaffold_9545              I 229 I 1722
s Dinomys_branickii.DinBra_scaffold_1996                   158441 1 +    228994 G
i Dinomys_branickii.DinBra_scaffold_1996                I 232 I 1030
s Dolichotis_patagonum.DolPat_scaffold_14102                37048 1 -     73477 a
i Dolichotis_patagonum.DolPat_scaffold_14102            I 276 I 2554
s Eidolon_helvum.KE772537.1                                 13797 1 +     24177 A
i Eidolon_helvum.KE772537.1                             I 221 I 832
s Elaphurus_davidianus.JRFZ01086400.1                     1493260 1 +   1727528 a
i Elaphurus_davidianus.JRFZ01086400.1                   I 221 I 2528
s Enhydra_lutris.KZ291749.1                              85873657 1 +  99434291 a
i Enhydra_lutris.KZ291749.1                             I 230 I 3171
s Eptesicus_fuscus.JH977687.1                             4708428 1 +   6522550 a
i Eptesicus_fuscus.JH977687.1                           I 172 I 237
s Equus_asinus.JREZ01000062.1                             5854724 1 -   7175178 a
i Equus_asinus.JREZ01000062.1                           I 231 I 1445
s Equus_caballus.CM000402.2                              13353224 1 +  41866177 a
i Equus_caballus.CM000402.2                             I 231 I 1445
s Equus_przewalskii.ATBW01073585.1                          14714 1 +     92910 a
i Equus_przewalskii.ATBW01073585.1                      I 231 I 1445
s Erythrocebus_patas.Contig8                             48778406 1 -  48907691 A
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          316734 1 +    330699 a
i Eschrichtius_robustus.EscRob_flattened_line_685       I 213 I 1683
s Eubalaena_japonica.EubJap_flattened_line_7756             63194 1 +     89355 a
i Eubalaena_japonica.EubJap_flattened_line_7756         I 219 I 1680
s Eulemur_albifrons.k141_715837                              6273 1 +     13586 A
i Eulemur_albifrons.k141_715837                         C 0 I 1552
s Eulemur_collaris.k141_311830                               6205 1 -      6809 A
i Eulemur_collaris.k141_311830                          C 0 N 0
s Eulemur_coronatus.k141_3240342                            12679 1 +     36558 A
i Eulemur_coronatus.k141_3240342                        C 0 I 1549
s Eulemur_flavifrons.k141_903901                             8996 1 +     60246 A
i Eulemur_flavifrons.k141_903901                        C 0 I 1557
s Eulemur_fulvus.k141_653297                                12478 1 +    109717 A
i Eulemur_fulvus.k141_653297                            C 0 I 1558
s Eulemur_macaco.k141_747087                                  463 1 -     19505 A
i Eulemur_macaco.k141_747087                            C 0 I 1557
s Eulemur_mongoz.k141_825972                                17138 1 +     27497 A
i Eulemur_mongoz.k141_825972                            C 0 I 1548
s Eulemur_rubriventer.k141_411740                           19594 1 +     26808 A
i Eulemur_rubriventer.k141_411740                       C 0 I 1556
s Eulemur_rufus.k141_1620292                                34332 1 +     46535 A
i Eulemur_rufus.k141_1620292                            C 0 I 1552
s Eulemur_sanfordi.k141_186399                              17058 1 -     29447 A
i Eulemur_sanfordi.k141_186399                          C 0 I 1558
s Felis_catus.CM001386.2                                129894481 1 - 159252932 a
i Felis_catus.CM001386.2                                I 222 I 3843
s Felis_catus_fca126.CM031420.1                         129281565 1 - 158578461 a
i Felis_catus_fca126.CM031420.1                         I 222 I 3727
s Felis_nigripes.FelNig_flattened_line_8080                 22703 1 +     52776 a
i Felis_nigripes.FelNig_flattened_line_8080             I 222 I 3684
s Fukomys_damarensis.KN123630.1                          13892903 1 -  19261668 G
i Fukomys_damarensis.KN123630.1                         I 230 I 2827
s Galago_moholi.ctg555                                     212136 1 -    847004 A
i Galago_moholi.ctg555                                  C 0 I 1540
s Galago_senegalensis.k141_964197                           14507 1 -     43889 A
i Galago_senegalensis.k141_964197                       C 0 I 1527
s Galagoides_demidoff.k141_1769638                          11575 1 +     27357 A
i Galagoides_demidoff.k141_1769638                      C 0 I 1565
s Giraffa_tippelskirchi.LVKQ01S012154.1                    183050 1 -    189561 a
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 216 I 2542
s Glis_glis.GliGli_scaffold_79770                           15275 1 -     18683 a
i Glis_glis.GliGli_scaffold_79770                       I 195 I 716
s Gorilla_beringei.k141_111300                               6984 1 -     14630 A
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119654084 1 - 195582420 A
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   78712 1 +    118900 a
i Graphiurus_murinus.GraMur_scaffold_4493               I 220 I 672
s Hapalemur_alaotrensis.k141_1280836                         3063 1 +     10286 A
i Hapalemur_alaotrensis.k141_1280836                    C 0 I 1557
s Hapalemur_gilberti.k141_279011                             1543 1 -     11661 A
i Hapalemur_gilberti.k141_279011                        C 0 I 1555
s Hapalemur_griseus.k141_1387522                             6869 1 +     56096 A
i Hapalemur_griseus.k141_1387522                        C 0 I 1556
s Hapalemur_meridionalis.k141_186231                        30118 1 -     42470 A
i Hapalemur_meridionalis.k141_186231                    C 0 I 1556
s Hapalemur_occidentalis.k141_797938                        46746 1 -     54384 A
i Hapalemur_occidentalis.k141_797938                    C 0 I 1555
s Helogale_parvula.HelPar_flattened_line_22962              18764 1 +     53719 a
i Helogale_parvula.HelPar_flattened_line_22962          I 225 I 3295
s Hemitragus_hylocrius.HemHyl_scaffold_16669                29272 1 -     91191 a
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 214 I 3188
s Heterocephalus_glaber.JH602058.1                        2553081 1 +  31725842 G
i Heterocephalus_glaber.JH602058.1                      I 688 I 7169
s Hippopotamus_amphibius.HipAmp_scaffold_1308              148617 1 +    277961 a
i Hippopotamus_amphibius.HipAmp_scaffold_1308           I 224 I 1584
s Hipposideros_armiger.JXIK01001085.1                      279930 1 -    477199 a
i Hipposideros_armiger.JXIK01001085.1                   I 222 I 2675
s Hipposideros_galeritus.HipGal_scaffold_104691              9070 1 -      9143 a
i Hipposideros_galeritus.HipGal_scaffold_104691         I 280 N 0
s Hoolock_leuconedys.ctg79                                      6674 1 -   7690867 A
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 18836 1 -     67322 a
i Hyaena_hyaena.HyaHya_flattened_line_20729             I 227 I 3797
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           19943 1 -    119109 G
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       I 266 I 956
s Hylobates_abbotti.k141_164775                              1457 1 -      2073 A
i Hylobates_abbotti.k141_164775                         C 0 C 0
s Hylobates_agilis.k141_1362131                               466 1 +      1075 A
i Hylobates_agilis.k141_1362131                         I 31 C 0
s Hylobates_klossii.k141_183401                              1010 1 -      1272 A
i Hylobates_klossii.k141_183401                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14626362 1 -  25970782 A
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_950183                             1058 1 +      2027 A
i Hylobates_muelleri.k141_950183                        C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             35522 1 -     60944 A
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     7687 1 +     22540 G
i Hystrix_cristata.HysCri_scaffold_50788                I 219 I 1865
s Ictidomys_tridecemlineatus.JH393315.1                   7127511 1 +  13083262 a
i Ictidomys_tridecemlineatus.JH393315.1                 I 201 I 2215
s Indri_indri.k141_5141390                                   1595 1 -      3181 A
i Indri_indri.k141_5141390                              C 0 N 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              10733 1 +     17520 a
i Inia_geoffrensis.IniGeo_flattened_line_66725          I 223 I 1681
s Jaculus_jaculus.JH727545.1                                 2793 1 -      4668 A
i Jaculus_jaculus.JH727545.1                            I 323 n 323
s Kogia_breviceps.KogBre_flattened_line_35920               25322 1 +     37189 a
i Kogia_breviceps.KogBre_flattened_line_35920           I 209 I 1673
s Lagothrix_lagothricha.k141_12968                          51578 1 -    147782 A
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    5041 1 +     26176 a
i Lasiurus_borealis.LasBor_scaffold_59542               I 159 I 241
s Lemur_catta.scaffold_1                                258408421 1 - 285822530 A
i Lemur_catta.scaffold_1                                C 0 I 1551
s Lepilemur_ankaranensis.k141_884009                        25172 1 +     39228 A
i Lepilemur_ankaranensis.k141_884009                    C 0 I 2113
s Lepilemur_dorsalis.k141_134267                            54558 1 +     63517 A
i Lepilemur_dorsalis.k141_134267                        C 0 I 2091
s Lepilemur_ruficaudatus.k141_617879                        79820 1 +    116806 A
i Lepilemur_ruficaudatus.k141_617879                    C 0 N 0
s Lepilemur_septentrionalis.k141_578524                     32811 1 -     33031 A
i Lepilemur_septentrionalis.k141_578524                 C 0 N 0
s Leptonychotes_weddellii.KB714749.1                      3087525 1 -   3498232 a
i Leptonychotes_weddellii.KB714749.1                    I 235 I 3294
s Lepus_americanus.LepAme_scaffold_62849                    15479 1 +     22452 a
i Lepus_americanus.LepAme_scaffold_62849                I 223 I 2946
s Lipotes_vexillifer.KE558548.1                            137685 1 +   3060487 a
i Lipotes_vexillifer.KE558548.1                         I 219 I 1681
s Lophocebus_aterrimus.ctg55                             19250030 1 +  19376315 A
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           11858 1 +     84689 A
i Loris_lydekkerianus.k141_550999                       C 0 I 1701
s Loris_tardigradus.ctg97                                 3779607 1 +   6799190 A
i Loris_tardigradus.ctg97                               C 0 I 1691
s Loxodonta_africana.GL010040.1                          20596681 1 -  62548349 a
i Loxodonta_africana.GL010040.1                         I 235 I 1206
s Lycaon_pictus.CM007556.1                               11089911 1 +  39895028 a
i Lycaon_pictus.CM007556.1                              I 228 I 4690
s Macaca_arctoides.k141_2201161                             21781 1 +     74745 A
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12708241 1 +  12821369 A
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                 819 1 -     26467 A
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           48686 1 +     63263 A
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                  796 1 -     26361 A
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 3973 1 -      7381 A
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  47211 1 -     79256 A
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196037313 1 + 196197964 A
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11447479 1 +  11645122 A
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   6165 1 -     46448 A
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                3831 1 -     13212 A
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 17508 1 -     55006 A
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43842614 1 +  43892939 A
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               18795 1 -     24607 A
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               6162 1 -     27140 A
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                702507 1 +    802869 A
i Macroglossus_sobrinus.MacSob_scaffold_879             I 215 I 802
s Mandrillus_leucophaeus.scaffold125                     43439192 1 -  43563597 A
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4452006 1 -   4543643 A
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            147590 1 +    252755 a
i Manis_javanica.JSZB01003966.1                         I 229 I 1635
s Manis_pentadactyla.KN017078.1                             37733 1 +     58827 a
i Manis_pentadactyla.KN017078.1                         I 229 I 1640
s Marmota_marmota.CZRN01000005.1                         36875419 1 +  64221397 A
i Marmota_marmota.CZRN01000005.1                        I 201 I 2167
s Mellivora_capensis.MelCap_flattened_line_15433             2556 1 -     87323 a
i Mellivora_capensis.MelCap_flattened_line_15433        I 230 I 3163
s Mesoplodon_bidens.MesBid_scaffold_96348                     317 1 -     12939 a
i Mesoplodon_bidens.MesBid_scaffold_96348               I 220 I 1683
s Microcebus_murinus.CM007691.1                          16511455 1 +  47401472 A
i Microcebus_murinus.CM007691.1                         C 0 I 1573
s Microgale_talazaci.MicTal_scaffold_34660                  39881 1 -     48017 c
i Microgale_talazaci.MicTal_scaffold_34660              I 260 I 880
s Micronycteris_hirsuta.MicHir_scaffold_37978               24386 1 -     32043 a
i Micronycteris_hirsuta.MicHir_scaffold_37978           I 207 I 274
s Miniopterus_natalensis.LDJU01000022.1                   8212508 1 +  10048721 a
i Miniopterus_natalensis.LDJU01000022.1                 I 209 I 213
s Miniopterus_schreibersii.MinSch_scaffold_24116            36997 1 +     45743 a
i Miniopterus_schreibersii.MinSch_scaffold_24116        I 209 I 214
s Miopithecus_ogouensis.k141_2935907                         3757 1 +     29742 A
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        13050 1 -    104932 a
i Mirounga_angustirostris.MirAng_flattened_line_8852    I 234 I 3265
s Mirza_zaza.k141_226143                                     6844 1 +      8497 A
i Mirza_zaza.k141_226143                                C 0 N 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 148113 1 +    154973 a
i Monodon_monoceros.MonMon_M_scaffold_5598              I 220 I 1682
s Mormoops_blainvillei.MorMeg_scaffold_2952                162936 1 +    265003 a
i Mormoops_blainvillei.MorMeg_scaffold_2952             I 211 I 259
s Moschus_moschiferus.MosMos_scaffold_78805                  3292 1 -     19904 a
i Moschus_moschiferus.MosMos_scaffold_78805             I 210 I 2514
s Mungos_mungo.MunMun_flattened_line_8729                  146463 1 -    168139 a
i Mungos_mungo.MunMun_flattened_line_8729               I 225 I 3276
s Murina_feae.MurFea_scaffold_2254                          23899 1 -    100666 a
i Murina_feae.MurFea_scaffold_2254                      I 168 I 236
s Muscardinus_avellanarius.MusAve_scaffold_9643             13830 1 +     98495 a
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 239 I 693
s Mustela_putorius.JH417978.1                             4425920 1 -  28371801 A
i Mustela_putorius.JH417978.1                           I 229 I 1640
s Myocastor_coypus.MyoCoy_scaffold_3653                     91919 1 -    117718 T
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 224 I 1922
s Myotis_brandtii.KE161952.1                               970768 1 +   8389877 a
i Myotis_brandtii.KE161952.1                            I 172 I 237
s Myotis_davidii.KB114863.1                               5022193 1 +   6462685 a
i Myotis_davidii.KB114863.1                             I 172 I 233
s Myotis_lucifugus.GL429887.1                             3468271 1 -   3747815 a
i Myotis_lucifugus.GL429887.1                           I 172 I 238
s Myotis_myotis.MyoMyo_scaffold_6123                        13514 1 +     66751 a
i Myotis_myotis.MyoMyo_scaffold_6123                    I 172 I 236
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             6588 1 -      8794 a
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        I 230 I 379
s Nasalis_larvatus.k141_153429                              10230 1 +     48152 A
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4486442 1 -  14209539 a
i Neomonachus_schauinslandi.NINY01007774.1              I 235 I 3272
s Neophocaena_asiaeorientalis.KZ688543.1                  3952721 1 -   4490290 a
i Neophocaena_asiaeorientalis.KZ688543.1                I 216 I 1665
s Nomascus_annamensis.k141_224620                             828 1 -      2316 A
i Nomascus_annamensis.k141_224620                       C 0 C 0
s Nomascus_concolor.k141_226614                              2925 1 -      5092 A
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_1032971                            495 1 -      1918 A
i Nomascus_gabriellae.k141_1032971                      C 0 C 0
s Nomascus_siki_b.tarseq_80                             26677 1 -  18771707 A
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  4347 1 +      4512 A
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                32694 1 +   3668941 a
i Nyctereutes_procyonoides.CAJHUB010000786.1            I 227 I 4766
s Nycticebus_bengalensis.LG16                            65568312 1 -  95554990 A
i Nycticebus_bengalensis.LG16                           C 0 I 1820
s Nycticebus_coucang.k141_2051882                            5038 1 +      6470 A
i Nycticebus_coucang.k141_2051882                       C 0 N 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65670645 1 +  89412551 A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 I 7698
s Octodon_degus.JH651621.1                                3687419 1 +  10294119 T
i Octodon_degus.JH651621.1                              I 223 I 1881
s Odobenus_rosmarus.KB229369.1                             681104 1 -   3126709 a
i Odobenus_rosmarus.KB229369.1                          I 235 I 3317
s Odocoileus_virginianus.KZ101650.1                       1081474 1 +   1425656 A
i Odocoileus_virginianus.KZ101650.1                     I 216 I 1764
s Okapia_johnstoni.LVCL01S0017931.1                         38772 1 +     78940 a
i Okapia_johnstoni.LVCL01S0017931.1                     I 211 I 2555
s Orcinus_orca.KB316965.1                                 7226410 1 -   7562323 a
i Orcinus_orca.KB316965.1                               I 220 I 1652
s Orycteropus_afer.OryAfe_flattened_line_13509              61630 1 -     66828 a
i Orycteropus_afer.OryAfe_flattened_line_13509          I 234 I 1802
s Oryctolagus_cuniculus.CM000803.1                      141878515 1 + 163896628 a
i Oryctolagus_cuniculus.CM000803.1                      I 224 I 2929
s Otocyon_megalotis.JAEUCK010005121.1                      309988 1 -    505867 a
i Otocyon_megalotis.JAEUCK010005121.1                   I 228 I 4617
s Otolemur_crassicaudatus.k141_505435                        1951 1 -     53940 A
i Otolemur_crassicaudatus.k141_505435                   C 0 I 1557
s Otolemur_garnettii.GL873528.1                          18009932 1 -  38779656 A
i Otolemur_garnettii.GL873528.1                         C 0 I 1557
s Ovis_aries.CM001582.2                                 134079064 1 - 275406953 a
i Ovis_aries.CM001582.2                                 I 214 I 3186
s Ovis_canadensis.OviCan_scaffold_6251                      80278 1 +    140051 a
i Ovis_canadensis.OviCan_scaffold_6251                  I 214 I 3200
s Panthera_onca.PanOnc_flattened_line_1615                  35848 1 +    295523 a
i Panthera_onca.PanOnc_flattened_line_1615              I 222 I 3467
s Panthera_pardus.KV860323.1                              3639598 1 +  18214204 a
i Panthera_pardus.KV860323.1                            I 222 I 3532
s Panthera_tigris.KE721879.1                              5029274 1 -   6340057 a
i Panthera_tigris.KE721879.1                            I 222 I 3504
s Pantholops_hodgsonii.KE114631.1                         1067926 1 -   1292953 a
i Pantholops_hodgsonii.KE114631.1                       I 217 I 3193
s Papio_anubis.CM001492.2                               188157993 1 - 188283584 A
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              1085 1 +     25005 A
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47515367 1 +  47705337 A
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 69357 1 -    104429 A
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    7886 1 +     14967 A
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 3751 1 -      7628 A
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    117343 1 -    135482 a
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 I 227 I 3468
s Perodicticus_ibeanus.k141_117958                           6635 1 -     23713 G
i Perodicticus_ibeanus.k141_117958                      C 0 I 2441
s Perodicticus_potto.k141_713187                            25949 1 -     27972 G
i Perodicticus_potto.k141_713187                        C 0 N 0
s Petromus_typicus.PetTyp_scaffold_33007                    15113 1 -     36578 G
i Petromus_typicus.PetTyp_scaffold_33007                I 226 I 1806
s Phocoena_phocoena.PhoPho_flattened_line_53071               864 1 +      8220 a
i Phocoena_phocoena.PhoPho_flattened_line_53071         I 216 I 1663
s Piliocolobus_badius.k141_1987485                           3763 1 -      5908 A
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       4381 1 -     17985 A
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            3748 1 +      7694 A
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26742232 1 +  26888534 A
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pithecia_albicans.k141_991845                             45180 1 -     61926 A
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        26563 1 +     78826 A
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                             10611 1 -     15800 A
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        13810 1 -     16101 A
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          7039 1 +      9673 A
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13476039 1 -  19735023 A
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           14942 1 -     31692 A
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           7330 1 +     21690 a
i Platanista_gangetica.PlaMin_flattened_line_72990      I 220 I 1665
s Plecturocebus_bernhardi.k141_959214                       24277 1 +     44506 A
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        24490 1 +     67491 A
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      14729 1 -     98129 A
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     24329 1 +    147771 A
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                          965 1 -     43940 A
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          5048 1 -     55515 A
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         24402 1 +    152463 A
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       2119 1 -    119457 A
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         14125 1 +    134592 A
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          24712 1 -     75465 A
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              188869 1 -    373494 A
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19809516 1 +  19899266 A
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               7510 1 -     15069 A
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              7625 1 +     14865 A
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6849792 1 +  12164890 A
i Prolemur_simus.MPIZ01000048.1                         C 0 I 1556
s Propithecus_coquerelli.NW_012147863.1                     19966 1 -     30946 n
i Propithecus_coquerelli.NW_012147863.1                 C 0 I 417
s Propithecus_coronatus.k141_1353159                         4869 1 +     11805 A
i Propithecus_coronatus.k141_1353159                    C 0 I 1570
s Propithecus_diadema.k141_577245                           44217 1 +     52369 A
i Propithecus_diadema.k141_577245                       C 0 I 1569
s Propithecus_edwardsi.k141_1317105                         36604 1 -     44753 A
i Propithecus_edwardsi.k141_1317105                     C 0 I 1569
s Propithecus_perrieri.k141_7554                            18527 1 +     27322 A
i Propithecus_perrieri.k141_7554                        C 0 I 1569
s Propithecus_tattersalli.k141_907138                       18161 1 -     53241 A
i Propithecus_tattersalli.k141_907138                   C 0 I 1570
s Propithecus_verreauxi.k141_158021                         40425 1 -     48185 A
i Propithecus_verreauxi.k141_158021                     C 0 I 1570
s Pteronotus_parnellii.KE867983.1                            5587 1 -     27784 a
i Pteronotus_parnellii.KE867983.1                       I 212 I 252
s Pteronura_brasiliensis.PteBra_flattened_line_1343        248232 1 -    344369 A
i Pteronura_brasiliensis.PteBra_flattened_line_1343     I 230 I 1447
s Pteropus_alecto.KB031157.1                             13247518 1 -  17261082 A
i Pteropus_alecto.KB031157.1                            I 221 I 869
s Pteropus_vampyrus.KN525959.1                             605468 1 -   3946241 A
i Pteropus_vampyrus.KN525959.1                          I 221 I 863
s Puma_concolor.QAVW01000427.1                          131535870 1 - 161321710 a
i Puma_concolor.QAVW01000427.1                          I 222 I 3556
s Pygathrix_cinerea.k141_374971                             31615 1 +     56732 A
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6808112 1 +   6970761 A
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             7501 1 +     18040 A
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                17586 1 +     68503 a
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 216 I 2516
s Rhinolophus_sinicus.LVEH01000179.1                      1789407 1 +   2252614 g
i Rhinolophus_sinicus.LVEH01000179.1                    I 233 I 2802
s Rhinopithecus_bieti.k119_554384                            1897 1 -     17045 A
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206379385 1 - 206558726 A
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44858287 1 -  45163003 A
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                20852 1 +    109198 A
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            I 219 I 881
s Saiga_tatarica.SaiTat_scaffold_82192                       9753 1 +     12214 a
i Saiga_tatarica.SaiTat_scaffold_82192                  I 216 N 0
s Saimiri_boliviensis.NW_024100938.1                     15674131 1 -  43202129 a
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        6044 1 +     34089 A
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              5986 1 -     60842 A
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              6079 1 +     67014 A
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              6057 1 +     60816 A
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 5994 1 -     76454 A
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17342726 1 -  30362882 A
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         22087 1 -     62485 A
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Semnopithecus_entellus.k141_1572367                        5117 1 +     15331 A
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      10492 1 +     20762 A
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         120497 1 +    130994 A
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           39276 1 +     46263 A
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     32421 1 +     42640 A
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        15443 1 +     30600 A
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            21217 1 +    739146 A
i Solenodon_paradoxus.SolPar_flattened_line_1012        I 1034 I 1961
s Sorex_araneus.JH798170.1                               17768125 1 -  27805282 T
i Sorex_araneus.JH798170.1                              I 384 I 1515
s Spermophilus_dauricus.KZ294190.1                        2241428 1 +   2842873 A
i Spermophilus_dauricus.KZ294190.1                      I 201 I 2173
s Suricata_suricatta.SurSur_flattened_line_20339            29117 1 +     62062 a
i Suricata_suricatta.SurSur_flattened_line_20339        I 220 I 3277
s Sus_scrofa.CM000824.4                                 189273669 1 + 218635234 a
i Sus_scrofa.CM000824.4                                 I 267 I 1086
s Symphalangus_syndactylus.tarseq_24                        16621 1 -  13920577 A
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                1821 1 +     20549 A
i Tadarida_brasiliensis.TadBra_scaffold_61492           I 217 I 242
s Tamandua_tetradactyla.TamTet_scaffold_26877               16258 1 +     45698 t
i Tamandua_tetradactyla.TamTet_scaffold_26877           I 232 I 379
s Tapirus_indicus.TapInd_scaffold_176                      808670 1 +   1148477 a
i Tapirus_indicus.TapInd_scaffold_176                   I 225 I 1722
s Tapirus_terrestris.TapTer_scaffold_14939                  59383 1 +     99546 a
i Tapirus_terrestris.TapTer_scaffold_14939              I 225 I 1651
s Theropithecus_gelada.CM009951.1                       194009524 1 - 194193292 A
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             40589 1 -     47444 G
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         I 206 I 76
s Tolypeutes_matacus.TolMat_scaffold_1305119                  436 1 -       594 a
i Tolypeutes_matacus.TolMat_scaffold_1305119            I 234 N 0
s Tonatia_saurophila.TonSau_scaffold_3334                  137562 1 -    259118 a
i Tonatia_saurophila.TonSau_scaffold_3334               I 212 I 275
s Trachypithecus_auratus.k141_738098                        28764 1 +     38948 A
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   22324 1 -     32910 A
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      4225 1 -     12939 A
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       3653 1 -     14244 A
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           45046 1 -     54611 A
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        2847 1 -     11566 A
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     5031 1 -     15592 A
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          3683 1 +     14371 A
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   1969 1 +     12481 A
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        1950 1 -     24393 A
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       7094 1 -     28054 A
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44661878 1 -  44834318 A
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       4190 1 +     13828 A
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   6945 1 +     90398 a
i Tragulus_javanicus.TraJav_scaffold_14717              I 217 I 2201
s Trichechus_manatus.JH594618.1                          16087677 1 +  31416278 a
i Trichechus_manatus.JH594618.1                         I 236 I 1194
s Tupaia_chinensis.KB320831.1                             2795016 1 -   3938065 a
i Tupaia_chinensis.KB320831.1                           I 245 I 2381
s Tupaia_tana.TupTan_flattened_line_68454                    7121 1 +     13056 a
i Tupaia_tana.TupTan_flattened_line_68454               I 245 I 2210
s Tursiops_truncatus.MRVK01000923.1                      69315127 1 -  96451834 a
i Tursiops_truncatus.MRVK01000923.1                     I 220 I 1664
s Ursus_maritimus.KK498671.1                              6516356 1 +  28682327 a
i Ursus_maritimus.KK498671.1                            I 231 I 3529
s Varecia_rubra.k141_432109                                  6427 1 -     20643 A
i Varecia_rubra.k141_432109                             C 0 I 1561
s Varecia_variegata.k141_775891                             25962 1 -     33872 A
i Varecia_variegata.k141_775891                         C 0 I 1561
s Vicugna_pacos.KN269600.1                                1526154 1 -   2331223 g
i Vicugna_pacos.KN269600.1                              I 228 I 1673
s Vulpes_lagopus.VulLag_flattened_line_2045                140090 1 -    281493 a
i Vulpes_lagopus.VulLag_flattened_line_2045             I 228 I 3738
s Xerus_inauris.XerIna_scaffold_7898                       128399 1 -    134049 a
i Xerus_inauris.XerIna_scaffold_7898                    I 219 I 2868
s Zalophus_californianus.ZalCal_flattened_line_4097        215839 1 -    227762 a
i Zalophus_californianus.ZalCal_flattened_line_4097     I 235 I 3434
s Zapus_hudsonius.ZapHud_scaffold_64392                     17806 1 -     20485 a
i Zapus_hudsonius.ZapHud_scaffold_64392                 I 105 I 2410
s Ziphius_cavirostris.ZipCav_flattened_line_127025           8625 1 -      8775 a
i Ziphius_cavirostris.ZipCav_flattened_line_127025      I 220 N 0
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           4051 456 -      6963 I
e Ochotona_princeps.JH802095.1                            4996729 2205 -  23139505 I
e Perognathus_longimembris.PerPac_flattened_line_19359       1614 38 +     49596 I
e Dipodomys_stephensi.DipSte_scaffold_84338                  1789 28 -     11986 I
e Dipodomys_ordii.KN672545.1                              3659429 30 +   4240102 I
e Uropsilus_gracilis.UroGra_scaffold_69449                   8570 1192 +     10241 I
e Spilogale_gracilis.SpiGra_flattened_line_905             236262 1976 -    276980 I
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   38001 1220 -    114521 I
e Procavia_capensis.ProCapCap_scaffold_149274                2467 1156 -      9567 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Megaderma_lyra.MegLyr_scaffold_3562                       64783 239 -    234502 I
e Heterohyrax_brucei.HetBruBak_scaffold_25354               61360 1157 +     73687 I
e Elephantulus_edwardii.JH947210.1                        7830035 1277 +  15467074 I
e Echinops_telfairi.JH980316.1                           22999931 2 -  44670279 I
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1008 325 -      5782 I
e Condylura_cristata.JH655880.1                          60620867 918 +  78930452 I
e Allactaga_bullata.AllBul_scaffold_70162                   19523 1880 -     22067 I
e Galeopterus_variegatus.GalVar_scaffold_354               157483 1695 +    324696 I
e Microtus_ochrogaster.CM001673.1                        22821073 2807 -  98408828 I
e Tarsius_wallacei.k141_48636                               60532 3805 +     65473 I
e Tarsius_lariang.k141_609102                               27216 3812 +     42269 I
e Sigmodon_hispidus.SigHis_scaffold_11332                  101684 3004 -    120886 I
e Rattus_norvegicus.chr11                                13915860 1475 +  90463843 I
e Psammomys_obesus.NESX01026517.1                           36723 1197 +     77221 I
e Peromyscus_maniculatus.KI615518.1                       4951906 3218 -   8017169 I
e Onychomys_torridus.OnyTor_scaffold_12578                  38526 4229 +     62360 I
e Ondatra_zibethicus.OndZib_scaffold_6821                  126338 3732 +    145789 I
e Nannospalax_galili.KL201303.1                            119252 614 +    362372 I
e Mus_spretus.CM004110.1                                 74333573 2703 +  97876770 I
e Mus_pahari.LT608305.1                                  67557037 2889 +  89017189 I
e Mus_musculus.chr16                                     75490838 2711 +  98207768 I
e Mus_caroli.LT608236.1                                  70767758 3738 +  92629107 I
e Mesocricetus_auratus.KB708139.1                         1048323 2868 -  26018355 I
e Meriones_unguiculatus.MerUng_scaffold_52233               14635 934 +     15977 I
e Ellobius_lutescens.LOEQ01003611.1                        240703 2767 -    369425 I
e Cricetulus_griseus.LT883672.1                          53031727 2939 +  72327488 I
e Cricetomys_gambianus.CriGam_scaffold_949                 279623 2673 -    399297 I
e Cephalopachus_bancanus.k141_702587                         8788 3391 +     21754 I
e Carlito_syrichta.NW_007248099.1                          309764 3411 +    345090 I
e Acomys_cahirinus.AcoCah_scaffold_1625                    115109 2323 -    189883 I
e Pan_paniscus.CM003386.1                               127575888 480 - 205426864 I
e Pan_troglodytes.CM009241.2                            120153042 480 - 196562556 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               15271  8 +    209709 T----AGT-AAAA
s Acinonyx_jubatus.LLWD01000356.1                         2038906  6 +   3721120 g----tgt-at--
i Acinonyx_jubatus.LLWD01000356.1                       I 3396 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    117432  1 -    189883 G------------
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 2323 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10662588  6 +  23371972 g----act-at--
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 3502 C 0
s Ailurus_fulgens.LNAC01000003.1                          7099374  6 -  16596857 g----aca-at--
i Ailurus_fulgens.LNAC01000003.1                        I 3152 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   21403  1 -     22067 G------------
i Allactaga_bullata.AllBul_scaffold_70162               I 1880 C 0
s Allenopithecus_nigroviridis.k141_2469532                   3001  8 -     60446 T----AGC-AAAA
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         3718  8 -     29318 T----AGC-AAAA
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         2654  8 +     38766 T----AGC-AAAA
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          3612  8 -     80423 T----AGC-AAAA
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            11599  8 -     18050 G----AGC-AAAA
i Alouatta_belzebul.k141_1818029                        C 0 C 0
s Alouatta_caraya.k141_1710068                               1315  8 +      1555 T----AGT-AAAA
i Alouatta_caraya.k141_1710068                          I 1 C 0
s Alouatta_discolor.k141_811576                             12272  8 -     21359 G----AGC-AAAA
i Alouatta_discolor.k141_811576                         C 0 C 0
s Alouatta_juara.k141_1244470                                1895  8 +      2129 T----AGT-AAAA
i Alouatta_juara.k141_1244470                           C 0 C 0
s Alouatta_macconnelli.k141_2177643                          1272  8 -      1868 T----AGT-AAAA
i Alouatta_macconnelli.k141_2177643                     C 0 C 0
s Alouatta_nigerrima.k141_3537692                            1321  8 +      1660 T----AGT-AAAA
i Alouatta_nigerrima.k141_3537692                       C 0 C 0
s Alouatta_palliata.k141_2764429                             1241  8 -      1480 T----AGT-AAAA
i Alouatta_palliata.k141_2764429                        C 0 C 0
s Alouatta_puruensis.k141_131505                              528  8 +      4855 T----AGT-AAAA
i Alouatta_puruensis.k141_131505                        C 0 C 0
s Alouatta_seniculus.k141_1531728                            1456  8 -      1692 T----AGT-AAAA
i Alouatta_seniculus.k141_1531728                       C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3525111  6 +   4113121 g----agg-gt--
i Ammotragus_lervia.NIVO01013474.1                      I 3185 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             2542  6 +     55446 g----agg-gt--
i Antilocapra_americana.AntAmePen_scaffold_27338        N 0 C 0
s Aotus_azarae.k141_3170768                                 63941  8 +     78111 T----AGT-AAAA
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            6884  8 +     22701 T----AGT-AAAA
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5750841  8 +   9889416 T----agt-aaaa
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             7430  8 -    104377 T----AGT-AAAA
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               7432  8 +     23246 T----AGT-AAAA
i Aotus_vociferans.k141_718647                          C 0 C 0
s Arctocebus_calabarensis.k141_587554                        4707  3 +      9265 -------T-GC--
i Arctocebus_calabarensis.k141_587554                   I 2476 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9540708  8 +  39197703 T----AGT-AAAA
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             61981  8 +     85812 T----AGT-AAAA
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                12994  8 +     89302 T----AGT-AAAA
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             17495  8 -     58268 T----AGT-AAAA
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             65489  8 +    119057 T----AGT-AAAA
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               7458  8 -     25888 T----AGT-AAAA
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 9534  6 -     16375 c----act-gA--
i Avahi_laniger.k141_2840928                            I 1572 C 0
s Avahi_peyrierasi.k141_798820                               3150  6 +      6337 c----act-gA--
i Avahi_peyrierasi.k141_798820                          I 1572 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26383575  6 +  51448160 c----aga-gt--
i Balaenoptera_acutorostrata.KI537095.1                 I 1680 C 0
s Balaenoptera_bonaerensis.DF502048.1                        8748  6 -     13118 c----aga-gt--
i Balaenoptera_bonaerensis.DF502048.1                   I 1680 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   47573  6 -     72089 g----aga-gt--
i Beatragus_hunteri.BeaHun_scaffold_21644               I 2543 C 0
s Bison_bison.KN264915.1                                   301721  6 -   6870073 g----agg-gt--
i Bison_bison.KN264915.1                                n 9757 C 0
s Bos_indicus.CM003021.1                                 22955819  6 + 161108492 g----agg-gt--
i Bos_indicus.CM003021.1                                n 13915 C 0
s Bos_mutus.JH883513.1                                     418084  6 +    998990 g----agg-gt--
i Bos_mutus.JH883513.1                                  n 9565 C 0
s Bos_taurus.CM000177.6                                  22664473  6 + 158972876 g----agg-gt--
i Bos_taurus.CM000177.6                                 n 13762 C 0
s Bubalus_bubalis.KI419065.1                               674236  6 +   1914593 g----agg-gt--
i Bubalus_bubalis.KI419065.1                            n 7938 C 0
s Cacajao_ayresi.k141_724503                               115342  8 -    171031 T----AGT-AAAA
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 14371  8 +    125063 T----AGT-AAAA
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                16414  8 -    216513 T----AGT-AAAA
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        8957  8 -    134917 T----AGT-AAAA
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3222719  3 -   8989139 -------a-gt--
i Camelus_bactrianus.KN276303.1                         I 1669 C 0
s Camelus_dromedarius.KN271192.1                           400421  3 -  15254737 -------a-gt--
i Camelus_dromedarius.KN271192.1                        I 1670 C 0
s Camelus_ferus.KB016973.1                                2976157  3 +   6889770 -------a-gt--
i Camelus_ferus.KB016973.1                              I 1670 C 0
s CanFam4.chr31                                          11525752  6 +  39901454 g----gct-at--
i CanFam4.chr31                                         I 4498 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   20726  6 +     87036 g----gct-at--
i Canis_lupus_VD.CanFam_VD_scaffold_16982               I 4447 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11272435  6 -  35597290 g----gct-at--
i Canis_lupus_dingo.QKWQ01001993.1                      I 4512 C 0
s Canis_lupus_familiaris.chr31                           11095146  6 +  39895921 g----gct-at--
i Canis_lupus_familiaris.chr31                          I 4690 C 0
s Canis_lupus_orion.HG994411.1                           16461931  6 -  44759192 g----gct-at--
i Canis_lupus_orion.HG994411.1                          I 4462 C 0
s Capra_aegagrus.CM003214.1                              21330191  6 + 157394656 g----agg-gt--
i Capra_aegagrus.CM003214.1                             I 3205 C 0
s Capra_hircus.CM004562.1                               135711408  6 - 157403528 g----agg-gt--
i Capra_hircus.CM004562.1                               I 3205 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   162271  6 -    276539 a----agc-gt--
i Catagonus_wagneri.CatWag_scaffold_1305                I 1616 C 0
s Cebus_albifrons.Contig22                               18892182  8 -  29618158 T----ACT-AAAA
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 9726  8 -     26817 T----AGT-AAAA
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                13969  8 +     25043 T----AGT-AAAA
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4367157  6 +   7569818 g----aga-gt--
i Ceratotherium_simum.JH767818.1                        I 1722 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         6914  6 -      9338 g----aga-gt--
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    I 1722 C 0
s Cercocebus_atys.KQ010443.1                              6556944  8 +   6739814 T----AGC-AAAA
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      28418  8 +     60454 T----AGC-AAAA
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          3625  8 -     21101 T----AGC-AAAA
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         60935  8 -    107033 T----AGC-AAAA
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        3818  8 -     17608 T----AGC-AAAA
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                           977  8 +     45019 T----AGC-AAAA
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           1061  8 +     15177 T----AGC-AAAA
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          3861  8 +     16677 T----AGC-AAAA
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           26031  8 +     35983 T----AGC-AAAA
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11992559  8 +  12117833 T----AGC-AAAA
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46479317  8 +  46592721 T----AGC-AAAA
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      42871  8 -     45581 T----AGC-AAAA
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       3873  8 +     35577 T----AGC-AAAA
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        3646  8 -     25661 T----AGC-AAAA
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        3625  8 -     17744 T----AGC-AAAA
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        23231  8 +     37128 T----AGC-AAAA
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           61821  6 -     68416 c----act-ga--
i Cheirogaleus_major.k141_1157592                       I 1586 C 0
s Cheirogaleus_medius.k141_133808                           10865  6 +     13308 c----act-ga--
i Cheirogaleus_medius.k141_133808                       I 1578 C 0
s Cheracebus_lucifer.k141_619653                             6999  9 -     18223 T----AGTAAAAA
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             24017  9 +     25473 T----AGTAAAAA
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           43057  9 +     57117 T----AGTAAAAA
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          47736  9 +     54541 T----AGTAAAAA
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chiropotes_israelita.k141_1189915                         72539  8 +    196370 T----AGT-AAAA
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          16719  8 +     40510 T----AGT-AAAA
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15141228  8 -  15256731 T----AGC-AAAA
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      35837  8 -     53260 T----AGC-AAAA
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101146396  8 + 101219884 T----Agc-aaaa
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10888381  8 +  10971483 T----AGC-AAAA
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147666309  8 + 156195979 T----AGC-AAAA
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            18292  8 +     23629 T----AGC-AAAA
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60621785  6 +  78930452 g----ggt-at--
i Condylura_cristata.JH655880.1                         I 918 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         1333  4 -      5782 G-AG-A-------
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    I 325 I 2
s Cricetomys_gambianus.CriGam_scaffold_949                 282296  1 -    399297 G------------
i Cricetomys_gambianus.CriGam_scaffold_949              I 2673 C 0
s Cricetulus_griseus.LT883672.1                          53034666  1 +  72327488 G------------
i Cricetulus_griseus.LT883672.1                         I 2939 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              1220  6 -     22648 G----AAA-AT--
i Crocidura_indochinensis.CroInd_scaffold_27484         N 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            56913  6 -     70449 g----tgt-at--
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 3347 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  213663  1 -    956709 T------------
i Ctenodactylus_gundi.CteGun_scaffold_447               I 1143 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                20445  1 +     26546 a------------
i Cuniculus_paca.CunPac_flattened_line_16637            I 1705 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             61583  1 -    236241 a------------
i Dasyprocta_punctata.DasPun_flattened_line_634         I 1753 C 0
s Daubentonia_madagascariensis.ctg11                     16847681  6 +  31942871 c----act-gA--
i Daubentonia_madagascariensis.ctg11                    I 1581 C 0
s Delphinapterus_leucas.KZ290064.1                       80040205  2 -  96802777 ---------gt--
i Delphinapterus_leucas.KZ290064.1                      I 1681 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 325806  6 +    993696 g----aga-gt--
i Dicerorhinus_sumatrensis.PEKH010003161.1              I 1719 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   6446  6 +    151128 g----aga-gt--
i Diceros_bicornis.DicBicMic_scaffold_9545              I 1722 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                39603  1 -     73477 A------------
i Dolichotis_patagonum.DolPat_scaffold_14102            I 2554 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1495789  6 +   1727528 g----aag-gt--
i Elaphurus_davidianus.JRFZ01086400.1                   I 2528 C 0
s Ellobius_lutescens.LOEQ01003611.1                        243470  1 -    369425 G------------
i Ellobius_lutescens.LOEQ01003611.1                     I 2767 C 0
s Ellobius_talpinus.LOJH01198462.1                           1212  1 -      1901 G------------
i Ellobius_talpinus.LOJH01198462.1                      N 0 C 0
s Enhydra_lutris.KZ291749.1                              85876829  6 +  99434291 g----act-at--
i Enhydra_lutris.KZ291749.1                             I 3171 C 0
s Equus_asinus.JREZ01000062.1                             5856170  6 -   7175178 g----aga-gc--
i Equus_asinus.JREZ01000062.1                           I 1445 C 0
s Equus_caballus.CM000402.2                              13354670  6 +  41866177 g----aga-gc--
i Equus_caballus.CM000402.2                             I 1445 C 0
s Equus_przewalskii.ATBW01073585.1                          16160  6 +     92910 g----aga-gc--
i Equus_przewalskii.ATBW01073585.1                      I 1445 C 0
s Erythrocebus_patas.Contig8                             48778407  8 -  48907691 T----AGC-AAAA
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          318418  6 +    330699 c----aga-gt--
i Eschrichtius_robustus.EscRob_flattened_line_685       I 1683 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             64875  6 +     89355 c----aga-gt--
i Eubalaena_japonica.EubJap_flattened_line_7756         I 1680 C 0
s Eulemur_albifrons.k141_715837                              7826  6 +     13586 c----act-gA--
i Eulemur_albifrons.k141_715837                         I 1552 C 0
s Eulemur_collaris.k141_1015201                              1096  6 -      4292 c----act-gA--
i Eulemur_collaris.k141_1015201                         N 0 C 0
s Eulemur_coronatus.k141_3240342                            14229  6 +     36558 c----act-gA--
i Eulemur_coronatus.k141_3240342                        I 1549 C 0
s Eulemur_flavifrons.k141_903901                            10554  6 +     60246 c----act-gA--
i Eulemur_flavifrons.k141_903901                        I 1557 C 0
s Eulemur_fulvus.k141_653297                                14037  6 +    109717 c----act-gA--
i Eulemur_fulvus.k141_653297                            I 1558 C 0
s Eulemur_macaco.k141_747087                                 2021  6 -     19505 c----act-gA--
i Eulemur_macaco.k141_747087                            I 1557 C 0
s Eulemur_mongoz.k141_825972                                18687  6 +     27497 c----act-gA--
i Eulemur_mongoz.k141_825972                            I 1548 C 0
s Eulemur_rubriventer.k141_411740                           21151  6 +     26808 c----act-gA--
i Eulemur_rubriventer.k141_411740                       I 1556 C 0
s Eulemur_rufus.k141_1620292                                35885  6 +     46535 c----act-gA--
i Eulemur_rufus.k141_1620292                            I 1552 C 0
s Eulemur_sanfordi.k141_186399                              18617  6 -     29447 c----act-gA--
i Eulemur_sanfordi.k141_186399                          I 1558 C 0
s Felis_catus.CM001386.2                                129898325  6 - 159252932 g----tgt-at--
i Felis_catus.CM001386.2                                I 3843 C 0
s Felis_catus_fca126.CM031420.1                         129285293  6 - 158578461 g----tgt-at--
i Felis_catus_fca126.CM031420.1                         I 3727 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 26388  6 +     52776 g----tgt-at--
i Felis_nigripes.FelNig_flattened_line_8080             I 3684 C 0
s Galago_moholi.ctg555                                     213677  3 -    847004 -------T-GC--
i Galago_moholi.ctg555                                  I 1540 C 0
s Galago_senegalensis.k141_964197                           16035  3 -     43889 -------T-GC--
i Galago_senegalensis.k141_964197                       I 1527 C 0
s Galagoides_demidoff.k141_1769638                          13141  3 +     27357 -------T-GC--
i Galagoides_demidoff.k141_1769638                      I 1565 C 0
s Fukomys_damarensis.KN123630.1                          13895731  1 -  19261668 a------------
i Fukomys_damarensis.KN123630.1                         I 2827 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               159178  6 +    324696 g----aga-gt--
i Galeopterus_variegatus.GalVar_scaffold_354            I 1695 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    185593  6 -    189561 g----agg-gt--
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 2542 C 0
s Glis_glis.GliGli_scaffold_79770                           15992  1 -     18683 g------------
i Glis_glis.GliGli_scaffold_79770                       I 716 C 0
s Gorilla_beringei.k141_111300                               6985  8 -     14630 C----AGT-AAAA
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119654085  8 - 195582420 C----AGT-AAAA
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   79385  1 +    118900 g------------
i Graphiurus_murinus.GraMur_scaffold_4493               I 672 C 0
s Hapalemur_alaotrensis.k141_1280836                         4621  6 +     10286 c----act-gC--
i Hapalemur_alaotrensis.k141_1280836                    I 1557 C 0
s Hapalemur_gilberti.k141_279011                             3099  6 -     11661 c----act-gC--
i Hapalemur_gilberti.k141_279011                        I 1555 C 0
s Hapalemur_griseus.k141_1387522                             8426  6 +     56096 c----act-gC--
i Hapalemur_griseus.k141_1387522                        I 1556 C 0
s Hapalemur_meridionalis.k141_186231                        31675  6 -     42470 c----act-gC--
i Hapalemur_meridionalis.k141_186231                    I 1556 C 0
s Hapalemur_occidentalis.k141_797938                        48302  6 -     54384 c----act-gC--
i Hapalemur_occidentalis.k141_797938                    I 1555 C 0
s Helogale_parvula.HelPar_flattened_line_22962              22060  6 +     53719 g----tgt-at--
i Helogale_parvula.HelPar_flattened_line_22962          I 3295 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                32461  6 -     91191 g----agg-gt--
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 3188 C 0
s Heterocephalus_glaber.JH602058.1                        2560251  1 +  31725842 a------------
i Heterocephalus_glaber.JH602058.1                      I 7169 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_13814               68353  6 -    108006 A----TGC-AT--
i Heterohyrax_brucei.HetBruBak_scaffold_13814           n 1157 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              150202  6 +    277961 g----aga-gg--
i Hippopotamus_amphibius.HipAmp_scaffold_1308           I 1584 C 0
s Hipposideros_armiger.JXIK01001085.1                      282606  2 -    477199 t----a-------
i Hipposideros_armiger.JXIK01001085.1                   I 2675 I 2
s Hipposideros_galeritus.HipGal_scaffold_52959                375  2 +     26078 t----a-------
i Hipposideros_galeritus.HipGal_scaffold_52959          N 0 I 2
s Hoolock_leuconedys.ctg79                                      6675  8 -   7690867 T----AGT-AAAA
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 22634  6 -     67322 g----cgt-at--
i Hyaena_hyaena.HyaHya_flattened_line_20729             I 3797 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           20900  1 -    119109 A------------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       I 956 C 0
s Hylobates_abbotti.k141_164775                              1458  8 -      2073 T----AGT-AAAA
i Hylobates_abbotti.k141_164775                         C 0 C 0
s Hylobates_agilis.k141_1362131                               467  8 +      1075 T----AGT-AAAA
i Hylobates_agilis.k141_1362131                         C 0 I 71
s Hylobates_klossii.k141_183401                              1011  8 -      1272 T----AGT-AAAA
i Hylobates_klossii.k141_183401                         C 0 I 71
s Hylobates_pileatus_b.ContigUN                                 14626363  8 -  25970782 T----AGT-AAAA
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_950183                             1059  8 +      2027 T----AGT-AAAA
i Hylobates_muelleri.k141_950183                        C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             35523  8 -     60944 T----AGT-AAAA
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7129727  1 +  13083262 g------------
i Ictidomys_tridecemlineatus.JH393315.1                 I 2215 C 0
s Indri_indri.k141_2197838                                    110  6 +      3484 T----ACT-GA--
i Indri_indri.k141_2197838                              N 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              12415  2 +     17520 c----a-------
i Inia_geoffrensis.IniGeo_flattened_line_66725          I 1681 I 2
s Jaculus_jaculus.JH725517.1                              8577087  1 +  11848649 g------------
i Jaculus_jaculus.JH725517.1                            I 10229 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               26996  2 +     37189 c----a-------
i Kogia_breviceps.KogBre_flattened_line_35920           I 1673 I 2
s Lagothrix_lagothricha.k141_12968                          51579  8 -    147782 T----AGT-AAAA
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lemur_catta.scaffold_1                                258409973  6 - 285822530 c----acc-gA--
i Lemur_catta.scaffold_1                                I 1551 C 0
s Lepilemur_ankaranensis.k141_884009                        27286  6 +     39228 c----act-ga--
i Lepilemur_ankaranensis.k141_884009                    I 2113 C 0
s Lepilemur_dorsalis.k141_134267                            56650  6 +     63517 c----act-ga--
i Lepilemur_dorsalis.k141_134267                        I 2091 C 0
s Lepilemur_ruficaudatus.k141_574529                        35031  6 -     38897 c----act-ga--
i Lepilemur_ruficaudatus.k141_574529                    N 0 C 0
s Lepilemur_septentrionalis.k141_710646                      1078  6 -     13103 c----act-ga--
i Lepilemur_septentrionalis.k141_710646                 N 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3090820  6 -   3498232 g----act-ag--
i Leptonychotes_weddellii.KB714749.1                    I 3294 C 0
s Lipotes_vexillifer.KE558548.1                            139367  2 +   3060487 c----a-------
i Lipotes_vexillifer.KE558548.1                         I 1681 I 2
s Lophocebus_aterrimus.ctg55                             19250031  8 +  19376315 T----AGC-AAAA
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           13560  3 +     84689 -------T-GC--
i Loris_lydekkerianus.k141_550999                       I 1701 C 0
s Loris_tardigradus.ctg97                                 3781299  3 +   6799190 -------T-GC--
i Loris_tardigradus.ctg97                               I 1691 C 0
s Loxodonta_africana.GL010040.1                          20597888  6 -  62548349 a----aga-gt--
i Loxodonta_africana.GL010040.1                         I 1206 C 0
s Lycaon_pictus.CM007556.1                               11094602  6 +  39895028 g----gct-at--
i Lycaon_pictus.CM007556.1                              I 4690 C 0
s Macaca_arctoides.k141_2201161                             21782  8 +     74745 T----AGC-AAAA
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12708242  8 +  12821369 T----AGC-AAAA
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                 820  8 -     26467 T----AGC-AAAA
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           48687  8 +     63263 T----AGC-AAAA
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                  797  8 -     26361 T----AGC-AAAA
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 3974  8 -      7381 T----AGC-AAAA
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  47212  8 -     79256 T----AGC-AAAA
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196037314  8 + 196197964 T----AGC-AAAA
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11447480  8 +  11645122 T----AGC-AAAA
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   6166  8 -     46448 T----AGC-AAAA
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                3832  8 -     13212 T----AGC-AAAA
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 17509  8 -     55006 T----AGC-AAAA
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43842615  8 +  43892939 T----AGC-AAAA
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               18796  8 -     24607 T----AGC-AAAA
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               6163  8 -     27140 T----AGC-AAAA
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43439193  8 -  43563597 T----AGC-AAAA
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4452007  8 -   4543643 T----AGC-AAAA
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            149226  6 +    252755 g----aga-gc--
i Manis_javanica.JSZB01003966.1                         I 1635 C 0
s Manis_pentadactyla.KN017078.1                             39374  6 +     58827 g----aga-gt--
i Manis_pentadactyla.KN017078.1                         I 1640 C 0
s Marmota_marmota.CZRN01000005.1                         36877587  1 +  64221397 g------------
i Marmota_marmota.CZRN01000005.1                        I 2167 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       65022  4 -    234502 g--aga-------
i Megaderma_lyra.MegLyr_scaffold_3562                   I 239 I 2
s Mellivora_capensis.MelCap_flattened_line_15433             5720  6 -     87323 g----act-at--
i Mellivora_capensis.MelCap_flattened_line_15433        I 3163 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               15569  1 +     15977 A------------
i Meriones_unguiculatus.MerUng_scaffold_52233           I 934 C 0
s Mesocricetus_auratus.KB708139.1                         1051191  1 -  26018355 G------------
i Mesocricetus_auratus.KB708139.1                       I 2868 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    2001  2 -     12939 c----a-------
i Mesoplodon_bidens.MesBid_scaffold_96348               I 1683 I 2
s Microcebus_murinus.CM007691.1                          16513029  6 +  47401472 C----ACT-CA--
i Microcebus_murinus.CM007691.1                         I 1573 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  40762  6 -     48017 g----aaa-tt--
i Microgale_talazaci.MicTal_scaffold_34660              I 880 C 0
s Microtus_ochrogaster.CM001673.1                        22823880  1 -  98408828 G------------
i Microtus_ochrogaster.CM001673.1                       I 2807 C 0
s Miopithecus_ogouensis.k141_2935907                         3758  8 +     29742 T----AGC-AAAA
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        16316  6 -    104932 g----act-ag--
i Mirounga_angustirostris.MirAng_flattened_line_8852    I 3265 C 0
s Mirza_zaza.k141_593947                                     4083  6 -     12809 C----ACT-GA--
i Mirza_zaza.k141_593947                                N 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 149796  2 +    154973 c----a-------
i Monodon_monoceros.MonMon_M_scaffold_5598              I 1682 I 2
s Moschus_moschiferus.MosMos_scaffold_78805                  5807  6 -     19904 g----agg-gc--
i Moschus_moschiferus.MosMos_scaffold_78805             I 2514 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  149740  6 -    168139 g----tgt-at--
i Mungos_mungo.MunMun_flattened_line_8729               I 3276 C 0
s Mus_caroli.LT608236.1                                  70771496  1 +  92629107 G------------
i Mus_caroli.LT608236.1                                 I 3738 C 0
s Mus_musculus.chr16                                     75493549  1 +  98207768 G------------
i Mus_musculus.chr16                                    I 2711 C 0
s Mus_pahari.LT608305.1                                  67559926  1 +  89017189 G------------
i Mus_pahari.LT608305.1                                 I 2889 C 0
s Mus_spretus.CM004110.1                                 74336276  1 +  97876770 G------------
i Mus_spretus.CM004110.1                                I 2703 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             14524  1 +     98495 g------------
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 693 C 0
s Mustela_putorius.JH417978.1                             4427561  6 -  28371801 g----act-at--
i Mustela_putorius.JH417978.1                           I 1640 C 0
s Nannospalax_galili.KL201303.1                            119866  1 +    362372 G------------
i Nannospalax_galili.KL201303.1                         I 614 C 0
s Nasalis_larvatus.k141_153429                              10231  8 +     48152 T----AGC-AAAA
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4489715  6 -  14209539 g----act-ag--
i Neomonachus_schauinslandi.NINY01007774.1              I 3272 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3954387  2 -   4490290 c----a-------
i Neophocaena_asiaeorientalis.KZ688543.1                I 1665 I 2
s Nomascus_annamensis.k141_224620                             829  8 -      2316 T----AGT-AAAA
i Nomascus_annamensis.k141_224620                       C 0 C 0
s Nomascus_concolor.k141_226614                              2926  8 -      5092 T----AGT-AAAA
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_1032971                            496  8 -      1918 T----AGT-AAAA
i Nomascus_gabriellae.k141_1032971                      C 0 C 0
s Nomascus_siki_b.tarseq_80                             26678  8 -  18771707 T----AGT-AAAA
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  4348  8 +      4512 T----AGT-AAAA
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                37461  6 +   3668941 g----gct-at--
i Nyctereutes_procyonoides.CAJHUB010000786.1            I 4766 C 0
s Nycticebus_bengalensis.LG16                            65570133  3 -  95554990 -------T-GC--
i Nycticebus_bengalensis.LG16                           I 1820 C 0
s Nycticebus_coucang.k141_771591                            13542  3 +     16181 -------T-GC--
i Nycticebus_coucang.k141_771591                        N 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65678344  3 +  89412551 -------T-GC--
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     I 7698 C 0
s Odobenus_rosmarus.KB229369.1                             684422  6 -   3126709 g----act-ag--
i Odobenus_rosmarus.KB229369.1                          I 3317 C 0
s Odocoileus_virginianus.KZ101650.1                       1083239  6 +   1425656 g----aag-gt--
i Odocoileus_virginianus.KZ101650.1                     I 1764 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         41328  6 +     78940 g----agg-gt--
i Okapia_johnstoni.LVCL01S0017931.1                     I 2555 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  130070  1 +    145789 G------------
i Ondatra_zibethicus.OndZib_scaffold_6821               I 3732 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  42755  1 +     62360 G------------
i Onychomys_torridus.OnyTor_scaffold_12578              I 4229 C 0
s Orcinus_orca.KB316965.1                                 7228063  2 -   7562323 c----a-------
i Orcinus_orca.KB316965.1                               I 1652 I 2
s Orycteropus_afer.OryAfe_flattened_line_13509              63433  6 -     66828 G----AAA-GT--
i Orycteropus_afer.OryAfe_flattened_line_13509          I 1802 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      314606  6 -    505867 g----gct-at--
i Otocyon_megalotis.JAEUCK010005121.1                   I 4617 C 0
s Otolemur_crassicaudatus.k141_505435                        3509  3 -     53940 -------T-GT--
i Otolemur_crassicaudatus.k141_505435                   I 1557 C 0
s Otolemur_garnettii.GL873528.1                          18011490  3 -  38779656 -------T-GT--
i Otolemur_garnettii.GL873528.1                         I 1557 C 0
s Ovis_aries.CM001582.2                                 134082251  6 - 275406953 g----agg-gt--
i Ovis_aries.CM001582.2                                 I 3186 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      83479  6 +    140051 g----agg-gt--
i Ovis_canadensis.OviCan_scaffold_6251                  I 3200 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  39316  6 +    295523 g----tgt-at--
i Panthera_onca.PanOnc_flattened_line_1615              I 3467 C 0
s Panthera_pardus.KV860323.1                              3643131  6 +  18214204 g----tgt-at--
i Panthera_pardus.KV860323.1                            I 3532 C 0
s Panthera_tigris.KE721879.1                              5032779  6 -   6340057 g----tgt-at--
i Panthera_tigris.KE721879.1                            I 3504 C 0
s Pantholops_hodgsonii.KE114631.1                         1071120  6 -   1292953 g----agg-gt--
i Pantholops_hodgsonii.KE114631.1                       I 3193 C 0
s Papio_anubis.CM001492.2                               188157994  8 - 188283584 T----AGC-AAAA
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              1086  8 +     25005 T----AGC-AAAA
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47515368  8 +  47705337 T----AGC-AAAA
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 69358  8 -    104429 T----AGC-AAAA
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    7887  8 +     14967 T----AGC-AAAA
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 3752  8 -      7628 T----AGC-AAAA
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    120812  6 -    135482 g----tat-at--
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 I 3468 C 0
s Perodicticus_ibeanus.k141_117958                           9077  3 -     23713 -------T-GC--
i Perodicticus_ibeanus.k141_117958                      I 2441 C 0
s Perodicticus_potto.k141_1136815                           10204  3 +     61070 -------T-GC--
i Perodicticus_potto.k141_1136815                       N 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4955124  1 -   8017169 G------------
i Peromyscus_maniculatus.KI615518.1                     I 3218 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    16920  1 -     36578 A------------
i Petromus_typicus.PetTyp_scaffold_33007                I 1806 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              2528  2 +      8220 c----a-------
i Phocoena_phocoena.PhoPho_flattened_line_53071         I 1663 I 2
s Piliocolobus_badius.k141_1987485                           3764  8 -      5908 T----AGC-AAAA
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       4382  8 -     17985 T----AGC-AAAA
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            3749  8 +      7694 T----AGC-AAAA
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26742233  8 +  26888534 T----AGC-AAAA
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pithecia_albicans.k141_991845                             45181  8 -     61926 T----AGT-AAAA
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        26564  8 +     78826 T----AGT-AAAA
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                             10612  8 -     15800 T----AGT-AAAA
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        13811  8 -     16101 T----AGT-AAAA
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          7040  8 +      9673 T----AGT-AAAA
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13476040  8 -  19735023 T----AGT-AAAA
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           14943  8 -     31692 T----AGT-AAAA
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           8996  2 +     21690 c----a-------
i Platanista_gangetica.PlaMin_flattened_line_72990      I 1665 I 2
s Plecturocebus_bernhardi.k141_959214                       24278  9 +     44506 T----AGTAAAAA
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        24491  9 +     67491 T----AGTAAAAA
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      14730  9 -     98129 T----AGTAAAAA
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     24330  9 +    147771 T----AGTAAAAA
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                          966  9 -     43940 T----AGTAAAAA
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          5049  9 -     55515 T----AGTAAAAA
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         24403  9 +    152463 T----AGTAAAAA
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       2120  9 -    119457 T----AGTAAAAA
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         14126  9 +    134592 T----AGTAAAAA
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          24713  9 -     75465 T----AGTAAAAA
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              188870  8 -    373494 T----AGT-AAAA
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19809517  8 +  19899266 T----AGT-AAAA
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               7511  8 -     15069 T----AGC-AAAA
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              7626  8 +     14865 T----AGC-AAAA
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_11797                50315  6 -     88779 A----TGC-AT--
i Procavia_capensis.ProCapCap_scaffold_11797            n 1156 C 0
s Prolemur_simus.MPIZ01000048.1                           6851349  6 +  12164890 C----ACT-GA--
i Prolemur_simus.MPIZ01000048.1                         I 1556 C 0
s Propithecus_coquerelli.NW_012147863.1                     20384  6 -     30946 C----ACT-GA--
i Propithecus_coquerelli.NW_012147863.1                 I 417 C 0
s Propithecus_coronatus.k141_1353159                         6440  6 +     11805 c----act-ga--
i Propithecus_coronatus.k141_1353159                    I 1570 C 0
s Propithecus_diadema.k141_577245                           45787  6 +     52369 c----act-ga--
i Propithecus_diadema.k141_577245                       I 1569 C 0
s Propithecus_edwardsi.k141_1317105                         38174  6 -     44753 c----act-ga--
i Propithecus_edwardsi.k141_1317105                     I 1569 C 0
s Propithecus_perrieri.k141_7554                            20097  6 +     27322 c----act-ga--
i Propithecus_perrieri.k141_7554                        I 1569 C 0
s Propithecus_tattersalli.k141_907138                       19732  6 -     53241 c----act-ga--
i Propithecus_tattersalli.k141_907138                   I 1570 C 0
s Propithecus_verreauxi.k141_158021                         41996  6 -     48185 c----act-ga--
i Propithecus_verreauxi.k141_158021                     I 1570 C 0
s Psammomys_obesus.NESX01026517.1                           37920  1 +     77221 A------------
i Psammomys_obesus.NESX01026517.1                       I 1197 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        249680  6 -    344369 g----act-at--
i Pteronura_brasiliensis.PteBra_flattened_line_1343     I 1447 C 0
s Puma_concolor.QAVW01000427.1                          131539427  6 - 161321710 g----tgt-at--
i Puma_concolor.QAVW01000427.1                          I 3556 C 0
s Pygathrix_cinerea.k141_374971                             31616  8 +     56732 T----AGC-AAAA
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6808113  8 +   6970761 T----AGC-AAAA
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             7502  8 +     18040 T----AGC-AAAA
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                20103  6 +     68503 g----aag-gt--
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 2516 C 0
s Rattus_norvegicus.chr11                                13917335  1 +  90463843 G------------
i Rattus_norvegicus.chr11                               I 1475 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1792210  2 +   2252614 g----a-------
i Rhinolophus_sinicus.LVEH01000179.1                    I 2802 I 2
s Rhinopithecus_bieti.k119_554384                            1898  8 -     17045 T----AGC-AAAA
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206379386  8 - 206558726 T----AGC-AAAA
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44858288  8 -  45163003 T----AGC-AAAA
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_1069354                       99  6 -       709 g----agg-gt--
i Saiga_tatarica.SaiTat_scaffold_1069354                N 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15674132  8 -  43202129 t----agt-aaaa
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        6045  8 +     34089 T----AGT-AAAA
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              5987  8 -     60842 T----AGT-AAAA
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              6080  8 +     67014 T----AGT-AAAA
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              6058  8 +     60816 T----AGT-AAAA
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 5995  8 -     76454 T----AGT-AAAA
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17342727  8 -  30362882 T----AGT-AAAA
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         22088  8 -     62485 T----AGT-AAAA
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   39221 10 -    114521 GGTGtggt-gt--
i Scalopus_aquaticus.ScaAqu_scaffold_9300               I 1220 C 0
s Semnopithecus_entellus.k141_1572367                        5118  8 +     15331 G----AGC-AAAA
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      10493  8 +     20762 G----AGC-AAAA
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         120498  8 +    130994 G----AGC-AAAA
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           39277  8 +     46263 G----AGC-AAAA
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     32422  8 +     42640 G----AGC-AAAA
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        15444  8 +     30600 G----AGC-AAAA
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  104688  1 -    120886 G------------
i Sigmodon_hispidus.SigHis_scaffold_11332               I 3004 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            23179  6 +    739146 g----aaa-gt--
i Solenodon_paradoxus.SolPar_flattened_line_1012        I 1961 C 0
s Sorex_araneus.JH798170.1                               17769641  6 -  27805282 g----aaa-at--
i Sorex_araneus.JH798170.1                              I 1515 C 0
s Spermophilus_dauricus.KZ294190.1                        2243602  1 +   2842873 g------------
i Spermophilus_dauricus.KZ294190.1                      I 2173 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             238238  6 -    276980 g----gct-at--
i Spilogale_gracilis.SpiGra_flattened_line_905          I 1976 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            32395  6 +     62062 g----tgt-at--
i Suricata_suricatta.SurSur_flattened_line_20339        I 3277 C 0
s Symphalangus_syndactylus.tarseq_24                        16622  8 -  13920577 T----AGT-AAAA
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      810393  6 +   1148477 g----aga-gt--
i Tapirus_indicus.TapInd_scaffold_176                   I 1722 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  61035  6 +     99546 g----aga-gt--
i Tapirus_terrestris.TapTer_scaffold_14939              I 1651 C 0
s Theropithecus_gelada.CM009951.1                       194009525  8 - 194193292 T----AGC-AAAA
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Trachypithecus_auratus.k141_738098                        28765  8 +     38948 G----AGC-AAAA
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   22325  8 -     32910 G----AGC-AAAA
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      4226  8 -     12939 G----AGC-AAAA
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       3654  8 -     14244 G----AGC-AAAA
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           45047  8 -     54611 G----AGC-AAAA
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        2848  8 -     11566 G----AGC-AAAA
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     5032  8 -     15592 G----AGC-AAAA
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          3684  8 +     14371 G----AGC-AAAA
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   1970  8 +     12481 G----AGC-AAAA
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        1951  8 -     24393 G----AGC-AAAA
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       7095  8 -     28054 G----AGC-AAAA
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44661879  8 -  44834318 G----AGC-AAAA
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       4191  8 +     13828 G----AGC-AAAA
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   9147  2 +     90398 G----A-------
i Tragulus_javanicus.TraJav_scaffold_14717              I 2201 I 2
s Trichechus_manatus.JH594618.1                          16088872  6 +  31416278 a----aga-gt--
i Trichechus_manatus.JH594618.1                         I 1194 C 0
s Tupaia_chinensis.KB320831.1                             2797398  6 -   3938065 G----AGA-CT--
i Tupaia_chinensis.KB320831.1                           I 2381 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    9332  6 +     13056 G----AGA-CT--
i Tupaia_tana.TupTan_flattened_line_68454               I 2210 C 0
s Tursiops_truncatus.MRVK01000923.1                      69316792  2 -  96451834 c----a-------
i Tursiops_truncatus.MRVK01000923.1                     I 1664 I 2
s Uropsilus_gracilis.UroGra_scaffold_69449                   9762  6 +     10241 G----AGT-AT--
i Uropsilus_gracilis.UroGra_scaffold_69449              I 1192 C 0
s Ursus_maritimus.KK498671.1                              6519886  6 +  28682327 g----act-at--
i Ursus_maritimus.KK498671.1                            I 3529 C 0
s Varecia_rubra.k141_432109                                  7989  6 -     20643 c----act-gA--
i Varecia_rubra.k141_432109                             I 1561 C 0
s Varecia_variegata.k141_775891                             27524  6 -     33872 c----act-gA--
i Varecia_variegata.k141_775891                         I 1561 C 0
s Vicugna_pacos.KN269600.1                                1527828  4 -   2331223 ------ga-gt--
i Vicugna_pacos.KN269600.1                              I 1673 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                143829  6 -    281493 g----gct-at--
i Vulpes_lagopus.VulLag_flattened_line_2045             I 3738 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        219274  6 -    227762 g----act-ag--
i Zalophus_californianus.ZalCal_flattened_line_4097     I 3434 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     20217  1 -     20485 G------------
i Zapus_hudsonius.ZapHud_scaffold_64392                 I 2410 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            1536  2 -     13665 c----a-------
i Ziphius_cavirostris.ZipCav_flattened_line_60625       N 0 I 2
e Eptesicus_fuscus.JH977687.1                             4708429 237 +   6522550 I
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Dinomys_branickii.DinBra_scaffold_1996                   158442 1030 +    228994 I
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           4051 456 -      6963 I
e Oryctolagus_cuniculus.CM000803.1                      141878516 2929 + 163896628 I
e Ochotona_princeps.JH802095.1                            4996729 2205 -  23139505 I
e Lepus_americanus.LepAme_scaffold_62849                    15480 2946 +     22452 I
e Perognathus_longimembris.PerPac_flattened_line_19359       1614 38 +     49596 I
e Dipodomys_stephensi.DipSte_scaffold_84338                  1789 28 -     11986 I
e Dipodomys_ordii.KN672545.1                              3659429 30 +   4240102 I
e Tonatia_saurophila.TonSau_scaffold_3334                  137563 275 -    259118 I
e Tamandua_tetradactyla.TamTet_scaffold_26877               16259 379 +     45698 I
e Tadarida_brasiliensis.TadBra_scaffold_61492                1822 242 +     20549 I
e Sus_scrofa.CM000824.4                                 189273670 1086 + 218635234 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Pteronotus_parnellii.KE867983.1                            5588 252 -     27784 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             6589 379 -      8794 I
e Myotis_myotis.MyoMyo_scaffold_6123                        13515 236 +     66751 I
e Myotis_lucifugus.GL429887.1                             3468272 238 -   3747815 I
e Myotis_davidii.KB114863.1                               5022194 233 +   6462685 I
e Myotis_brandtii.KE161952.1                               970769 237 +   8389877 I
e Murina_feae.MurFea_scaffold_2254                          23900 236 -    100666 I
e Mormoops_blainvillei.MorMeg_scaffold_2952                162937 259 +    265003 I
e Miniopterus_schreibersii.MinSch_scaffold_24116            36998 214 +     45743 I
e Miniopterus_natalensis.LDJU01000022.1                   8212509 213 +  10048721 I
e Micronycteris_hirsuta.MicHir_scaffold_37978               24387 274 -     32043 I
e Lasiurus_borealis.LasBor_scaffold_59542                    5042 241 +     26176 I
e Elephantulus_edwardii.JH947210.1                        7830035 1277 +  15467074 I
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Echinops_telfairi.JH980316.1                           22999931  2 -  44670279 I
e Desmodus_rotundus.KZ672188.1                           18700517 262 -  18957592 I
e Dasypus_novemcinctus.JH568778.1                          185121 383 -   6883506 I
e Choloepus_hoffmanni.KN194586.1                           763329 503 +    964067 I
e Choloepus_didactylus.ChoDid_scaffold_36182                18024 504 -     21363 I
e Carollia_perspicillata.CarPer_scaffold_4436               61226 261 +     67245 I
e Artibeus_jamaicensis.ArtJam_scaffold_41619                10440 261 -     29036 I
e Anoura_caudifer.AnoCau_scaffold_422                      392020 257 -    631301 I
e Xerus_inauris.XerIna_scaffold_7898                       128400 2868 -    134049 I
e Tarsius_wallacei.k141_48636                               60532 3805 +     65473 I
e Tarsius_lariang.k141_609102                               27216 3812 +     42269 I
e Octodon_degus.JH651621.1                                3687420 1881 +  10294119 I
e Myocastor_coypus.MyoCoy_scaffold_3653                     91920 1922 -    117718 I
e Hystrix_cristata.HysCri_scaffold_50788                     7688 1865 +     22540 I
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 32592 1717 -     67205 I
e Chinchilla_lanigera.JH721867.1                         15963245 964 +  43084221 I
e Cephalopachus_bancanus.k141_702587                         8788 3391 +     21754 I
e Cavia_tschudii.CavTsc_scaffold_488                       177725 1742 +    436027 I
e Cavia_porcellus.DS562889.1                             15799553 1742 -  24440124 I
e Cavia_aperea.AVPZ01000278.1                            15787615 1741 -  24422027 I
e Carlito_syrichta.NW_007248099.1                          309764 3411 +    345090 I
e Pan_paniscus.CM003386.1                               127575888 480 - 205426864 I
e Pan_troglodytes.CM009241.2                            120153042 480 - 196562556 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               15279 71 +    209709 ATGTCCTTTTCTTCCATCAGAAACTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
s Allenopithecus_nigroviridis.k141_2469532                   3009 71 -     60446 ATGTCCTTTTCTTCCATCCGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACAGG---CTCTCCTTCT
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         3726 71 -     29318 ATTTCCTTTTCTTCCATCGGAAGCTTCATCCTGAATC-TTTTTATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         2662 71 +     38766 ATTTCCTTTTCTTCCATCGGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          3620 71 -     80423 ATTTCCTTTTCTTCCATCGGAAGCTTCATCCTGGATC-TTTTTATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            11607 45 -     18050 ATGTTCTTTTCTTCAA-------------CCTGGATC-TTTTCATCATTGCTTTTCTAC----------------
i Alouatta_belzebul.k141_1818029                        C 0 I 192
s Alouatta_caraya.k141_1710068                               1323 45 +      1555 ATGTTCTTTTCTTCAA-------------CCTGGATC-TTTTCATCATTGCTTTTCTAC----------------
i Alouatta_caraya.k141_1710068                          C 0 n 0
s Alouatta_discolor.k141_811576                             12280 45 -     21359 ATGTTCTTTTCTTCAA-------------CCTGGATC-TTTTCATCATTGCTTTTCTAC----------------
i Alouatta_discolor.k141_811576                         C 0 N 0
s Alouatta_juara.k141_1244470                                1903 46 +      2129 ATGTTCTTTTCTTCAA-------------CCTGGATCTTTTTCATCATTGCTTTTCTAC----------------
i Alouatta_juara.k141_1244470                           C 0 N 0
s Alouatta_macconnelli.k141_2177643                          1280 45 -      1868 ATCTTCTTTTCTTCAA-------------CCTGGATC-TTTTCATCATTGCTTTTCTAC----------------
i Alouatta_macconnelli.k141_2177643                     C 0 N 0
s Alouatta_nigerrima.k141_3537692                            1329 45 +      1660 ATGTTCTTTTCTTCAA-------------CCTGGATC-TTTTCATCATTGCTTTTCTAC----------------
i Alouatta_nigerrima.k141_3537692                       C 0 N 0
s Alouatta_palliata.k141_2764429                             1249 45 -      1480 ACGTTCTTTTCTTCAA-------------CCTGGAtc-ttttcatcattgcttttctac----------------
i Alouatta_palliata.k141_2764429                        C 0 n 0
s Alouatta_puruensis.k141_131505                              536 45 +      4855 ATGTTCTTTTCTTCAA-------------CCTGGATC-TTTTCATCATTGCTTTTCTAC----------------
i Alouatta_puruensis.k141_131505                        C 0 N 0
s Alouatta_seniculus.k141_1531728                            1464 45 -      1692 ATGTTCTTTTCTTCAA-------------CCTGGATC-TTTTCATCATTGCTTTTCTAC----------------
i Alouatta_seniculus.k141_1531728                       C 0 N 0
s Aotus_azarae.k141_3170768                                 63949 69 +     78111 ATGTTCTTTTCTTCCATAAGAAGCTTCATCCTGGATC-TTTTCATCATTGTTTTTCTACTAGG--CTCTC---CT
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            6892 72 +     22701 ATGTTCTTTTCTTCCATAAGAAGCTTCATCCTGGATC-TTTTCATCATTGTTTTTCTACTAGG--CTCTCCTTCT
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5750849 69 +   9889416 atgttcttttcttccatAAGAAGCTTCATCCTGGATC-TTTTCATCATTGTTTTTCTACTAGG--CTCTC---CT
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             7438 72 -    104377 ATGTTCTTTTCTTCCATAAGAAGCTTCATCCTGGATC-TTTTCATCATTGTTTTTCTACTAGG--CTCTCCTTCT
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               7440 72 +     23246 ATGTTCTTTTCTTCCATAAGAAGCTTCATCCTGGATC-TTTTCATCATTGTTTTTCTACTAGG--CTCTCCTTCT
i Aotus_vociferans.k141_718647                          C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9540716 59 +  39197703 ATGTTCTTTTCTTCAA-------------CCTGGATC-TTTTCATCATTGTTTTTCTACTAGG--CTCTCCTTCT
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             61989 59 +     85812 ATGTTCTTTTCTTCAA-------------CCTGGATC-TTTTCATCATTGTTTTTCTACTAGG--CTCTCCTTCT
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                13002 59 +     89302 ATGTTCTTTTCTTCAA-------------CCTGGATC-TTTTCATCATTGTTTTTCTACTAGG--CTCTCCTTCT
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             17503 59 -     58268 ATGTTCTTTTCTTCAA-------------CCTGGATC-TTTTCATCATTGTTTTTCTACTAGG--CTCTCCTTCT
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             65497 59 +    119057 ATGTTCTTTTCTTCAA-------------CCTGGATC-TTTTCATCATTGTTTTTCTACTAGG--CTCTCCTTCT
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               7466 59 -     25888 ATGTTCTTTTCTTCAA-------------CCTGGATC-TTTTCATCATTGTTTTTCTACTAGG--CTCTCCTTCT
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Cacajao_ayresi.k141_724503                               115350 72 -    171031 ATATTCTTTTCTTCCATAAGAAGCTTCATCCTGGATC-TTTTCATCATTGTTTTTCTACTAGG--CTCTCCTCCT
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 14379 72 +    125063 ATATTCATTTCTTCCATAAGAAGCTTCATCCTGGATC-TTTTCATCATTGTTTTTCTACTAGG--CTCTCCTCCT
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                16422 72 -    216513 ATATTCTTTTCTTCCATAAGAAGCTTCATCCTGGATC-TTTTCATCATTGTTTTTCTACTAGG--CTCTCCTCCT
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        8965 72 -    134917 ATATTCTTTTCTTCCATAAGAAGCTTCATCCTGGATC-TTTTCATCATTGTTTTTCTACTAGG--CTCTCCTCCT
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Cebus_albifrons.Contig22                               18892190 72 -  29618158 ATGTTCTTTTCTTCCATAAGAAGCTTCATCCTGGATC-TTTTCATCATTGTTTTTCTTCTAAG--CTCTCCTTCT
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 9734 72 -     26817 ATGTTCTTTTCTTCCATAAGAAGCTTCATCCTGGATC-TTTTCATCATTGTTTTTCTTCTAAG--CTCTCCTTCT
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                13977 72 +     25043 ATGTTCTTTTCTTCCATAAGAAGCTTCATCCTGGATC-TTTTCATCATTGTTTTTCTTCTAAG--CTCTCCTTCT
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cercocebus_atys.KQ010443.1                              6556952 71 +   6739814 ATGTCCTTTTCTTCCATCGGAAGCTTCGTCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      28426 71 +     60454 ATGTCCTTTTCTTCCATCGGAAGCTTCGTCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          3633 71 -     21101 ATGTCCTTTTCTTCCATCGGAAGCTTCGTCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         60943 71 -    107033 ATGTCCTTTTCTTCCATCGGAAGCTTTGTCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        3826 71 -     17608 ATGTCCTTTTCTTCCATCGGAAGCTTCATCCTGGATC-TTTTCACCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                           985 71 +     45019 ATGTCCTTTTCTTCCATCGGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           1069 71 +     15177 ATGTCCTTTTCTTCCATCGGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          3869 71 +     16677 ATGTCCTTTTCTTCCATCGGAATCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           26039 68 +     35983 ATGTCCTTTTCTTCCATCGGAAGCTTCATCCTGGATC-TTTTCACCCTTGTTTTTCTACTAG---CTCTCCT---
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11992567 71 +  12117833 ATGTCCTTTTCTTCCATCGGAAGCTTCATCCTGGATC-TTTTCACCCTTGTTTTTCTACTAG---CTCTCTTTCT
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46479325 71 +  46592721 ATGTCCTTTTCTTCCATCGGAAGCTTCATCCTGGATC-TTTTCACCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      42879 71 -     45581 ATGTCCTTTTCTTCCATCAGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       3881 71 +     35577 ATGTCCTTTTCTTCCATCGGAAGCTTCATCCTGGATC-TTTTCACCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        3654 71 -     25661 ATGTCCTTTTCTTCCATCGGAAGCTTCATCCTGGATC-TTTTCACCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        3633 71 -     17744 ATGTCCTTTTCTTCCATCGGAAGCTTCATCCTGGATC-TTTTCACCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        23239 71 +     37128 ATGTCCTTCTCTTCCATCGGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Cheracebus_lucifer.k141_619653                             7008 72 -     18223 ATGTTCTTTTCTTCCATAAGAAGCTTCATCCTGGATC-TTTTCATCATTGTTTTTCTACTAGG--CTCTCCTTCT
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             24026 72 +     25473 ATGTTCTTTTCTTCCATAAGAAGCTTCATCCTGGATC-TTTTCATCATTGTTTTTCTACTAGG--CTCTCCTTCT
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           43066 72 +     57117 ATGTTCTTTTCTTCCATAAGAAGCTTCATCCTGGATC-TTTTCATCATTGTTTTTCTACTAGG--CTCTCCTTCT
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          47745 72 +     54541 ATGTTCTTTTCTTCCATAAGAAGCTTCATCCTGGATC-TTTTCATCATTGTTTTTCTACTAGG--CTCTCCTTCT
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chiropotes_israelita.k141_1189915                         72547 69 +    196370 ATATTCTTTTCTTCCATAAGAAGCTTCATCCTGGATC-TTTTCATCATTGTTTTTCTACTAGG--CTCTCCT---
i Chiropotes_israelita.k141_1189915                     C 0 I 3
s Chiropotes_sagulatus.k141_773804                          16727 69 +     40510 ATATTCTTTTCTTCCATAAGAAGCTTCATTCTGGATC-TTTTCATCATTGTTTTTCTACTAGG--CTCTCCT---
i Chiropotes_sagulatus.k141_773804                      C 0 I 3
s Chlorocebus_aethiops.ctg22                             15141236 71 -  15256731 ATTTCCTTTTCTTCCATCGGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      35845 71 -     53260 ATTTCCTTTTCTTCCATCGGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101146404 71 + 101219884 atttccttttcttccatcgGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10888389 71 +  10971483 ATGTCCTTTTCTTCCATCGGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147666317 71 + 156195979 ATGTCCTTTTCTTCCATCGGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            18300 71 +     23629 ATGTCCTTTTCTTCCATCGGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Erythrocebus_patas.Contig8                             48778415 71 -  48907691 ATTTCCTTTTCTTCCATCGGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Erythrocebus_patas.Contig8                            C 0 C 0
s Gorilla_beringei.k141_111300                               6993 71 -     14630 ATGTCCTTTTCTTCCATCAGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119654093 71 - 195582420 ATGTCCTTTTCTTCCATCAGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Hoolock_leuconedys.ctg79                                      6683 71 -   7690867 ATGGCCTTTTCTTCCATCAGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hylobates_abbotti.k141_164775                              1466 71 -      2073 ATGGCCTTTTCTTCCATCAGAAGCTTCATCCTGGATC-TCTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Hylobates_abbotti.k141_164775                         C 0 C 0
s Hylobates_agilis.k141_55853                                1051 71 -      1487 ATGGCCTTTTCTTCCATCAGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Hylobates_agilis.k141_55853                           I 9 n 71
s Hylobates_klossii.k141_468230                              1022 71 +      5464 ATGGCCTTTTCTTCCATCAGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Hylobates_klossii.k141_468230                         I 298 I 90
s Hylobates_pileatus_b.ContigUN                                 14626371 71 -  25970782 ATGGCCTTTTCTTCCATCAGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_950183                             1067 71 +      2027 ATGGCCTTTTCTTCCATCAGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Hylobates_muelleri.k141_950183                        C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             35531 71 -     60944 ATGGCCTTTTCTTCCATCAGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Lagothrix_lagothricha.k141_12968                          51587 59 -    147782 ATTTTCTTTTCTTCAA-------------CCTGGATC-TTTTCATCATTGTTTTTCTACTAGG--CTCTCCTTCT
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lophocebus_aterrimus.ctg55                             19250039 71 +  19376315 CTGTCCTTTTCTTCCATCGGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Macaca_arctoides.k141_2201161                             21790 71 +     74745 ATGTCCTTTTCTTCCATCGGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12708250 71 +  12821369 ATGTCCTTTTCTTCCATCGGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                 828 71 -     26467 ATGTCCTTTTCTTCCATCGGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           48695 71 +     63263 ATGTCCTTTTCTTCCATTGGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                  805 71 -     26361 ATGTCCTTTTCTTCCATCGGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTGCTTCT
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 3982 71 -      7381 ATGTCCTTTTCTTCCATCGGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  47220 71 -     79256 ATGTCCTTTTCTTCCATCGGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196037322 71 + 196197964 ATGTCCTTTTCTTCCATCGGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11447488 71 +  11645122 ATGTCCTTTTCTTCCATTGGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   6174 71 -     46448 ATGTCCTTTTCTTCCATCGGAAGCTTCATCCTGGACC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                3840 71 -     13212 ATGTCCTTTTCTTCCATCGGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 17517 71 -     55006 ATGTCCTTTTCTTCCATCGGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43842623 71 +  43892939 ATGTCCTTTTCTTCCATCGGAAACTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               18804 71 -     24607 ATGTCCTTTTCTTCCATTGGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               6171 71 -     27140 ATGTCCTTTTCTTCCATCGGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43439201 71 -  43563597 ATGTCCTTTTCTTCCATCTGAAGCTTCATCCTGGATC-TTTCCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4452015 71 -   4543643 ATGTCCTTTTCTTCCATCGGAAGCTTCATCCTGGATC-TTTCCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         3766 71 +     29742 ATGTCCTTTTCTTCCATCGGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Nasalis_larvatus.k141_153429                              10239 71 +     48152 ATGTCCTTTTCTTCCATCGGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Nomascus_annamensis.k141_224620                             837 71 -      2316 ATGGCCTTTTCTTCCATCAGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Nomascus_annamensis.k141_224620                       C 0 C 0
s Nomascus_concolor.k141_226614                              2934 71 -      5092 ATGGCCTTTTCTTCCATCAGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_1032971                            504 71 -      1918 ATGGCCTTTTCTTCCATCAGAATCTTCATCCTGGATC-TTTTCATCCTTGTATTCCTACTAG---CTCTCCTTCT
i Nomascus_gabriellae.k141_1032971                      C 0 C 0
s Nomascus_siki_b.tarseq_80                             26686 71 -  18771707 ATGGCCTTTTCTTCCATCAGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_595747                                  4356 71 +      4512 ATGGCCTTTTCTTCCATCAGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTCCTACTAG---CTCTCCTTCT
i Nomascus_siki_a.k141_595747                             C 0 C 0
s Pan_paniscus.CM003386.1                               127576368 63 - 205426864 --------TTCTTCCATCAGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Pan_paniscus.CM003386.1                               I 480 C 0
s Pan_troglodytes.CM009241.2                            120153522 63 - 196562556 --------TTCTTCCATCAGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Pan_troglodytes.CM009241.2                            I 480 C 0
s Papio_anubis.CM001492.2                               188158002 71 - 188283584 ATGTCCTTTTCTTCCATCGGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              1094 71 +     25005 ATGTCCTTTTCTTCCATCGGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47515376 71 +  47705337 ATGTCCTTTTCTTCCATCGGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 69366 71 -    104429 ATGTCCTTTTCTTCTATCGGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    7895 71 +     14967 ATGTCCTTTTCTTCCATCGGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 3760 71 -      7628 ATGTCCTTTTCTTCCATCGGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Papio_ursinus.k141_1345919                            C 0 C 0
s Piliocolobus_badius.k141_1987485                           3772 71 -      5908 ATGTCCTTTTCTTCCATCGGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       4390 71 -     17985 ATGTCCTTTTCTTCCATCGGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            3757 71 +      7694 ATGTCCTTTTCTTCCATCGGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26742241 71 +  26888534 ATGTCCTTTTCTTCCATCGGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pithecia_albicans.k141_991845                             45189 72 -     61926 ATATTCTTTTCTTCCATAAGAATCTTCATCCTGGATC-TTTTCATCATTGTTTTTCTACTAGG--CTCTCCTTCT
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        26572 72 +     78826 ATATTCTTTTCTTCCATAAGAATCTTCATCCTGGATC-TTTTCATCATTGTTTTTCTACTAGG--CTCTCCTTCT
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                             10620 72 -     15800 ATATTCTTTTCTTCCATAAGAATCTTCATCCTGGATC-TTTTCATCATTGTTTTTCTACTAGG--CTCTCCTTCT
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        13819 72 -     16101 ATATTCTTTTCTTCCATAAGAATCTTCATCCTGGATC-TTTTCATCATTGTTTTTCTACTAGG--CTCTCCTTCT
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          7048 72 +      9673 ATATTCTTTTCTTCCATAAGAATCTTCATCCTGGATC-TTTTCATCATTGTTTTTCTACTAGG--CTCTCCTTCT
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13476048 72 -  19735023 ATATTCTTTTCTTCCATAAGAATCTTCATCCTGGATC-TTTTCATCATTGTTTTTCTACTAGG--CTCTCCTTCT
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           14951 72 -     31692 ATATTCTTTTCTTCCATAAGAATCTTCATCCTGGATC-TTTTCATCATTGTTTTTCTACTAGG--CTCTCCTTCT
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       24287 72 +     44506 ATGTTCTTTTCTTCCATAAGAAGCTTCATCCTGGATC-TTTTCGTCATTGTTTTTCTACTAGG--CTCTTCTTTT
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        24500 72 +     67491 GTGTTCTTTTCTTCCATAAGAAGCTTCATCCTGGATC-TTTTCGTCATTGTTTTTCTACTAGG--CTCTTCTTTT
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      14739 72 -     98129 ATGTTCTTTTCTTCCATAAGAAGCTTCATCCTGGATC-TTTTCGTCATTGTTTTTCTACTAGG--CTCTTCTTTT
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     24339 72 +    147771 ATGTTCTTTTCTTCCATAAGAAGCTTCATCCTGGATC-TTTTCGTCATTGTTTTTCTACTAGG--CTCTTCTTTT
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                          975 72 -     43940 ATGTTCTTTTCTTCCATAAGAAGCTTCATCCTGGATC-TTTTCGTCATTGTTTTTCTACTAGG--CTCTTCTTTT
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          5058 72 -     55515 ATGTTCTTTTCTTCCATAAGAAGCTTCATCCTGGATC-TTTTCGTCATTGTTTTTCTACTAGG--CTCTTCTTTT
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         24412 72 +    152463 ATGTTCTTTTCTTCCATAAGAAGCTTCATCCTGGATC-TTTTCGTCATTGTTTTTCTACTAGG--CTCTTCTTTT
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       2129 72 -    119457 ATGTTCTTTTCTTCCATAAGAAGCTTCATCCTGGATC-TTTTCGTCATTGTTTTTCTACTAGG--CTCTTCTTTT
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         14135 72 +    134592 ATGTTCTTTTCTTCCATAAGAAGCTTCATCCTGGATC-TTTTCGTCATTGTTTTTCTACTAGG--CTCTTCTTTT
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          24722 72 -     75465 ATGTTCTTTTCTTCCATAAGAAGCTTCATCCTGGATC-TTTTCGTCATTGTTTTTCTACTAGG--CTCTTCTTTT
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              188878 71 -    373494 ATGTCCTTTTCTTCCATCAGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCTTTCT
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19809525 71 +  19899266 ATGTCCTTTTCTTCCATCAGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCTTTCT
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               7519 71 -     15069 ATGTCCTTTTCTTCCATCGGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTCCTACTAG---CTCTCCTTCT
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              7634 71 +     14865 ATGTCCTTTTCTTCCATCGGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Pygathrix_cinerea.k141_374971                             31624 71 +     56732 ATGTCCTTTTCTTCCATCGGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6808121 71 +   6970761 ATGTCCTTTTCTTCCATCGGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             7510 71 +     18040 ATGTCCTTTTCTTCCATCGGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rhinopithecus_bieti.k119_554384                            1906 71 -     17045 ATGTCCTTTTCTTCCATTGGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTTT
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206379394 71 - 206558726 ATGTCCTTTTCTTCCATTGGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44858296 71 -  45163003 ATGTCCTTTTCTTCCATTGGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTTT
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15674140 72 -  43202129 atgttattttcttccatAAGAAGCTTCATTCTGGATC-TTTTCatcattgtttttcttctag--aCTCTCCTTCT
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        6053 72 +     34089 ATGTTATTTTCTTCCATAAGAAGCTTCATTCTGGATC-TTTTCATCATTGTTTTTCTTCTAG--ACTCTCCTTCT
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              5995 72 -     60842 ATGTTATTTTCTTCCATAAGAAGCTTCATTCTGGATC-TTTTCATCATTGTTTTTCTTCTAG--ACTCTCCTTCT
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              6088 72 +     67014 ATGTTATTTTCTTCCATAAGAAGCTTCATTCTGGATC-TTTTCATCATTGTTTTTCTTCTAG--ACTCTCCTTCT
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              6066 72 +     60816 ATGTTATTTTCTTCCATAAGAAGCTTCATTCTGGATC-TTTTCATCATTGTTTTTCTTCTAG--ACTCTCCTTCT
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 6003 72 -     76454 ATGTTATTTTCTTCCATAAGAAGCTTCATTCTGGATC-TTTTCATCATTGTTTTTCTTCTAG--ACTCTCCTTCT
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17342735 72 -  30362882 ATGTTCTTTTCTTCCATAAGAAGCTTCATCCTGGATC-TTTTCATCATTGTTTTTCTTCTAAG--CTCTCCTTCT
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         22096 72 -     62485 ATGTTCTTTTCTTCCATAAGAAGCTTCATCCTGGATC-TTTTCATCATTGTTTTTCTTCTAAG--CTCTCCTTCT
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Semnopithecus_entellus.k141_1572367                        5126 71 +     15331 ATGTCCTTTTCTTCCATCGGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      10501 71 +     20762 ATGTCCTTTTCTTCCATCGGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         120506 71 +    130994 ATGTCCTTTTCTTCCATCGGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           39285 71 +     46263 ATGTCCTTTTCTTCCATCGGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     32430 71 +     42640 ATGTCCTTTTCTTCCATCGGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        15452 71 +     30600 ATGTCCTTTTCTTCCATCGGAAGCTTCATCCTGGATC-TCTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        16630 71 -  13920577 ATGGCCTTTTCTTCCATCAGGAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCCTCT
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Theropithecus_gelada.CM009951.1                       194009533 71 - 194193292 ATGTCCTTTTCTTCCATCGGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Trachypithecus_auratus.k141_738098                        28773 71 +     38948 ATGTCCTTTTCTTCCATCGGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   22333 71 -     32910 ATGTCCTTTTCTTCCATCGGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      4234 71 -     12939 ATGTCCTTTTCTTCCATCGGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       3662 71 -     14244 ATGTCCTTTTCTTCCATCGGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           45055 71 -     54611 ATGTCCTTTTCTTCCATCGGAAGCTTCATCCTGGATC-TTTTTATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        2856 71 -     11566 ATGTCCTTTTCTTCCATCAGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     5040 71 -     15592 ATGTCCTTTTCTTCCATCGGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          3692 71 +     14371 ATGTCCTTTTCTTCCATCGGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   1978 71 +     12481 ATGTCCTTTTCTTCCATCGGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        1959 71 -     24393 ATGTCCTTTTCTTCCATCGGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       7103 71 -     28054 ATGTCCTTTTCTTCCATCGGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44661887 71 -  44834318 ATGTCCTTTTCTTCCATCGGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       4199 71 +     13828 ATGTCCTTTTCTTCCATCGGAAGCTTCATCCTGGATC-TTTTCATCCTTGTTTTTCTACTAG---CTCTCCTTCT
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
e Eptesicus_fuscus.JH977687.1                             4708429 237 +   6522550 I
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Petromus_typicus.PetTyp_scaffold_33007                    16921  0 -     36578 C
e Sorex_araneus.JH798170.1                               17769647  0 -  27805282 C
e Dinomys_branickii.DinBra_scaffold_1996                   158442 1030 +    228994 I
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           4051 456 -      6963 I
e Oryctolagus_cuniculus.CM000803.1                      141878516 2929 + 163896628 I
e Ochotona_princeps.JH802095.1                            4996729 2205 -  23139505 I
e Lepus_americanus.LepAme_scaffold_62849                    15480 2946 +     22452 I
e Perognathus_longimembris.PerPac_flattened_line_19359       1614 38 +     49596 I
e Dipodomys_stephensi.DipSte_scaffold_84338                  1789 28 -     11986 I
e Dipodomys_ordii.KN672545.1                              3659429 30 +   4240102 I
e Suricata_suricatta.SurSur_flattened_line_20339            32401  0 +     62062 C
e Ziphius_cavirostris.ZipCav_flattened_line_60625            1538  2 -     13665 I
e Zalophus_californianus.ZalCal_flattened_line_4097        219280  0 -    227762 C
e Vulpes_lagopus.VulLag_flattened_line_2045                143835  0 -    281493 C
e Vicugna_pacos.KN269600.1                                1527832  0 -   2331223 C
e Ursus_maritimus.KK498671.1                              6519892  0 +  28682327 C
e Uropsilus_gracilis.UroGra_scaffold_69449                   9768  0 +     10241 C
e Tursiops_truncatus.MRVK01000923.1                      69316794  2 -  96451834 I
e Trichechus_manatus.JH594618.1                          16088878  0 +  31416278 C
e Tragulus_javanicus.TraJav_scaffold_14717                   9149  2 +     90398 I
e Tonatia_saurophila.TonSau_scaffold_3334                  137563 275 -    259118 I
e Tapirus_terrestris.TapTer_scaffold_14939                  61041  0 +     99546 C
e Tapirus_indicus.TapInd_scaffold_176                      810399  0 +   1148477 C
e Tamandua_tetradactyla.TamTet_scaffold_26877               16259 379 +     45698 I
e Tadarida_brasiliensis.TadBra_scaffold_61492                1822 242 +     20549 I
e Sus_scrofa.CM000824.4                                 189273670 1086 + 218635234 I
e Spilogale_gracilis.SpiGra_flattened_line_905             238244  0 -    276980 C
e Solenodon_paradoxus.SolPar_flattened_line_1012            23185  0 +    739146 C
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   39231  0 -    114521 C
e Saiga_tatarica.SaiTat_scaffold_1069354                      105  0 -       709 C
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Rhinolophus_sinicus.LVEH01000179.1                      1792212  2 +   2252614 I
e Rangifer_tarandus.RanTarSib_scaffold_24239                20109  0 +     68503 C
e Puma_concolor.QAVW01000427.1                          131539433  0 - 161321710 C
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Pteronura_brasiliensis.PteBra_flattened_line_1343        249686  0 -    344369 C
e Pteronotus_parnellii.KE867983.1                            5588 252 -     27784 I
e Procavia_capensis.ProCapCap_scaffold_11797                50321  0 -     88779 C
e Platanista_gangetica.PlaMin_flattened_line_72990           8998  2 +     21690 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Phocoena_phocoena.PhoPho_flattened_line_53071              2530  2 +      8220 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    120818  0 -    135482 C
e Pantholops_hodgsonii.KE114631.1                         1071126  0 -   1292953 C
e Panthera_tigris.KE721879.1                              5032785  0 -   6340057 C
e Panthera_pardus.KV860323.1                              3643137  0 +  18214204 C
e Panthera_onca.PanOnc_flattened_line_1615                  39322  0 +    295523 C
e Ovis_canadensis.OviCan_scaffold_6251                      83485  0 +    140051 C
e Ovis_aries.CM001582.2                                 134082257  0 - 275406953 C
e Otocyon_megalotis.JAEUCK010005121.1                      314612  0 -    505867 C
e Orycteropus_afer.OryAfe_flattened_line_13509              63439  0 -     66828 C
e Orcinus_orca.KB316965.1                                 7228065  2 -   7562323 I
e Okapia_johnstoni.LVCL01S0017931.1                         41334  0 +     78940 C
e Odocoileus_virginianus.KZ101650.1                       1083245  0 +   1425656 C
e Odobenus_rosmarus.KB229369.1                             684428  0 -   3126709 C
e Nyctereutes_procyonoides.CAJHUB010000786.1                37467  0 +   3668941 C
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Neophocaena_asiaeorientalis.KZ688543.1                  3954389  2 -   4490290 I
e Neomonachus_schauinslandi.NINY01007774.1                4489721  0 -  14209539 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             6589 379 -      8794 I
e Myotis_myotis.MyoMyo_scaffold_6123                        13515 236 +     66751 I
e Myotis_lucifugus.GL429887.1                             3468272 238 -   3747815 I
e Myotis_davidii.KB114863.1                               5022194 233 +   6462685 I
e Myotis_brandtii.KE161952.1                               970769 237 +   8389877 I
e Mustela_putorius.JH417978.1                             4427567  0 -  28371801 C
e Murina_feae.MurFea_scaffold_2254                          23900 236 -    100666 I
e Mungos_mungo.MunMun_flattened_line_8729                  149746  0 -    168139 C
e Moschus_moschiferus.MosMos_scaffold_78805                  5813  0 -     19904 C
e Mormoops_blainvillei.MorMeg_scaffold_2952                162937 259 +    265003 I
e Monodon_monoceros.MonMon_M_scaffold_5598                 149798  2 +    154973 I
e Mirounga_angustirostris.MirAng_flattened_line_8852        16322  0 -    104932 C
e Miniopterus_schreibersii.MinSch_scaffold_24116            36998 214 +     45743 I
e Miniopterus_natalensis.LDJU01000022.1                   8212509 213 +  10048721 I
e Micronycteris_hirsuta.MicHir_scaffold_37978               24387 274 -     32043 I
e Microgale_talazaci.MicTal_scaffold_34660                  40768  0 -     48017 C
e Mesoplodon_bidens.MesBid_scaffold_96348                    2003  2 -     12939 I
e Mellivora_capensis.MelCap_flattened_line_15433             5726  0 -     87323 C
e Megaderma_lyra.MegLyr_scaffold_3562                       65026  2 -    234502 I
e Manis_pentadactyla.KN017078.1                             39380  0 +     58827 C
e Manis_javanica.JSZB01003966.1                            149232  0 +    252755 C
e Lycaon_pictus.CM007556.1                               11094608  0 +  39895028 C
e Loxodonta_africana.GL010040.1                          20597894  0 -  62548349 C
e Lipotes_vexillifer.KE558548.1                            139369  2 +   3060487 I
e Leptonychotes_weddellii.KB714749.1                      3090826  0 -   3498232 C
e Lasiurus_borealis.LasBor_scaffold_59542                    5042 241 +     26176 I
e Kogia_breviceps.KogBre_flattened_line_35920               26998  2 +     37189 I
e Inia_geoffrensis.IniGeo_flattened_line_66725              12417  2 +     17520 I
e Hyaena_hyaena.HyaHya_flattened_line_20729                 22640  0 -     67322 C
e Hipposideros_galeritus.HipGal_scaffold_52959                377  2 +     26078 I
e Hipposideros_armiger.JXIK01001085.1                      282608  2 -    477199 I
e Hippopotamus_amphibius.HipAmp_scaffold_1308              150208  0 +    277961 C
e Heterohyrax_brucei.HetBruBak_scaffold_13814               68359  0 -    108006 C
e Hemitragus_hylocrius.HemHyl_scaffold_16669                32467  0 -     91191 C
e Helogale_parvula.HelPar_flattened_line_22962              22066  0 +     53719 C
e Giraffa_tippelskirchi.LVKQ01S012154.1                    185599  0 -    189561 C
e Felis_nigripes.FelNig_flattened_line_8080                 26394  0 +     52776 C
e Felis_catus_fca126.CM031420.1                         129285299  0 - 158578461 C
e Eubalaena_japonica.EubJap_flattened_line_7756             64881  0 +     89355 C
e Eschrichtius_robustus.EscRob_flattened_line_685          318424  0 +    330699 C
e Equus_przewalskii.ATBW01073585.1                          16166  0 +     92910 C
e Equus_caballus.CM000402.2                              13354676  0 +  41866177 C
e Equus_asinus.JREZ01000062.1                             5856176  0 -   7175178 C
e Enhydra_lutris.KZ291749.1                              85876835  0 +  99434291 C
e Elephantulus_edwardii.JH947210.1                        7830035 1277 +  15467074 I
e Elaphurus_davidianus.JRFZ01086400.1                     1495795  0 +   1727528 C
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Echinops_telfairi.JH980316.1                           22999931  2 -  44670279 I
e Diceros_bicornis.DicBicMic_scaffold_9545                   6452  0 +    151128 C
e Dicerorhinus_sumatrensis.PEKH010003161.1                 325812  0 +    993696 C
e Desmodus_rotundus.KZ672188.1                           18700517 262 -  18957592 I
e Delphinapterus_leucas.KZ290064.1                       80040207  0 -  96802777 C
e Dasypus_novemcinctus.JH568778.1                          185121 383 -   6883506 I
e Cryptoprocta_ferox.CryFer_flattened_line_19014            56919  0 -     70449 C
e Crocidura_indochinensis.CroInd_scaffold_27484              1226  0 -     22648 C
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1337  2 -      5782 I
e Condylura_cristata.JH655880.1                          60621791  0 +  78930452 C
e Choloepus_hoffmanni.KN194586.1                           763329 503 +    964067 I
e Choloepus_didactylus.ChoDid_scaffold_36182                18024 504 -     21363 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_160623         6920  0 -      9338 C
e Catagonus_wagneri.CatWag_scaffold_1305                   162277  0 -    276539 C
e Carollia_perspicillata.CarPer_scaffold_4436               61226 261 +     67245 I
e Capra_hircus.CM004562.1                               135711414  0 - 157403528 C
e Capra_aegagrus.CM003214.1                              21330197  0 + 157394656 C
e Canis_lupus_orion.HG994411.1                           16461937  0 -  44759192 C
e Canis_lupus_familiaris.chr31                           11095152  0 +  39895921 C
e Canis_lupus_dingo.QKWQ01001993.1                       11272441  0 -  35597290 C
e Canis_lupus_VD.CanFam_VD_scaffold_16982                   20732  0 +     87036 C
e CanFam4.chr31                                          11525758  0 +  39901454 C
e Camelus_ferus.KB016973.1                                2976160  0 +   6889770 C
e Camelus_dromedarius.KN271192.1                           400424  0 -  15254737 C
e Camelus_bactrianus.KN276303.1                           3222722  0 -   8989139 C
e Bubalus_bubalis.KI419065.1                               674242  0 +   1914593 C
e Bos_taurus.CM000177.6                                  22664479  0 + 158972876 C
e Bos_mutus.JH883513.1                                     418090  0 +    998990 C
e Bos_indicus.CM003021.1                                 22955825  0 + 161108492 C
e Bison_bison.KN264915.1                                   301727  0 -   6870073 C
e Beatragus_hunteri.BeaHun_scaffold_21644                   47579  0 -     72089 C
e Balaenoptera_bonaerensis.DF502048.1                        8754  0 -     13118 C
e Balaenoptera_acutorostrata.KI537095.1                  26383581  0 +  51448160 C
e Artibeus_jamaicensis.ArtJam_scaffold_41619                10440 261 -     29036 I
e Antilocapra_americana.AntAmePen_scaffold_27338             2548  0 +     55446 C
e Anoura_caudifer.AnoCau_scaffold_422                      392020 257 -    631301 I
e Ammotragus_lervia.NIVO01013474.1                        3525117  0 +   4113121 C
e Ailurus_fulgens.LNAC01000003.1                          7099380  0 -  16596857 C
e Ailuropoda_melanoleuca.LNAT01000321.1                  10662594  0 +  23371972 C
e Acinonyx_jubatus.LLWD01000356.1                         2038912  0 +   3721120 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           20901  0 -    119109 C
e Glis_glis.GliGli_scaffold_79770                           15993  0 -     18683 C
e Zapus_hudsonius.ZapHud_scaffold_64392                     20218  0 -     20485 C
e Jaculus_jaculus.JH725517.1                              8577088  0 +  11848649 C
e Allactaga_bullata.AllBul_scaffold_70162                   21404  0 -     22067 C
e Galeopterus_variegatus.GalVar_scaffold_354               159184  0 +    324696 C
e Microtus_ochrogaster.CM001673.1                        22823881  0 -  98408828 C
e Xerus_inauris.XerIna_scaffold_7898                       128400 2868 -    134049 I
e Varecia_variegata.k141_775891                             27530  0 -     33872 C
e Varecia_rubra.k141_432109                                  7995  0 -     20643 C
e Tupaia_tana.TupTan_flattened_line_68454                    9338  0 +     13056 C
e Tupaia_chinensis.KB320831.1                             2797404  0 -   3938065 C
e Tarsius_wallacei.k141_48636                               60532 3805 +     65473 I
e Tarsius_lariang.k141_609102                               27216 3812 +     42269 I
e Spermophilus_dauricus.KZ294190.1                        2243603  0 +   2842873 C
e Sigmodon_hispidus.SigHis_scaffold_11332                  104689  0 -    120886 C
e Rattus_norvegicus.chr11                                13917336  0 +  90463843 C
e Psammomys_obesus.NESX01026517.1                           37921  0 +     77221 C
e Propithecus_verreauxi.k141_158021                         42002  0 -     48185 C
e Propithecus_tattersalli.k141_907138                       19738  0 -     53241 C
e Propithecus_perrieri.k141_7554                            20103  0 +     27322 C
e Propithecus_edwardsi.k141_1317105                         38180  0 -     44753 C
e Propithecus_diadema.k141_577245                           45793  0 +     52369 C
e Propithecus_coronatus.k141_1353159                         6446  0 +     11805 C
e Propithecus_coquerelli.NW_012147863.1                     20390  0 -     30946 C
e Prolemur_simus.MPIZ01000048.1                           6851355  0 +  12164890 C
e Peromyscus_maniculatus.KI615518.1                       4955125  0 -   8017169 C
e Perodicticus_potto.k141_1136815                           10207  0 +     61070 C
e Perodicticus_ibeanus.k141_117958                           9080  0 -     23713 C
e Otolemur_garnettii.GL873528.1                          18011493  0 -  38779656 C
e Otolemur_crassicaudatus.k141_505435                        3512  0 -     53940 C
e Onychomys_torridus.OnyTor_scaffold_12578                  42756  0 +     62360 C
e Ondatra_zibethicus.OndZib_scaffold_6821                  130071  0 +    145789 C
e Octodon_degus.JH651621.1                                3687420 1881 +  10294119 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65678347  0 +  89412551 C
e Nycticebus_coucang.k141_771591                            13545  0 +     16181 C
e Nycticebus_bengalensis.LG16                            65570136  0 -  95554990 C
e Nannospalax_galili.KL201303.1                            119867  0 +    362372 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     91920 1922 -    117718 I
e Muscardinus_avellanarius.MusAve_scaffold_9643             14525  0 +     98495 C
e Mus_spretus.CM004110.1                                 74336277  0 +  97876770 C
e Mus_pahari.LT608305.1                                  67559927  0 +  89017189 C
e Mus_musculus.chr16                                     75493550  0 +  98207768 C
e Mus_caroli.LT608236.1                                  70771497  0 +  92629107 C
e Mirza_zaza.k141_593947                                     4089  0 -     12809 C
e Microcebus_murinus.CM007691.1                          16513035  0 +  47401472 C
e Mesocricetus_auratus.KB708139.1                         1051192  0 -  26018355 C
e Meriones_unguiculatus.MerUng_scaffold_52233               15570  0 +     15977 C
e Marmota_marmota.CZRN01000005.1                         36877588  0 +  64221397 C
e Loris_tardigradus.ctg97                                 3781302  0 +   6799190 C
e Loris_lydekkerianus.k141_550999                           13563  0 +     84689 C
e Lepilemur_septentrionalis.k141_710646                      1084  0 -     13103 C
e Lepilemur_ruficaudatus.k141_574529                        35037  0 -     38897 C
e Lepilemur_dorsalis.k141_134267                            56656  0 +     63517 C
e Lepilemur_ankaranensis.k141_884009                        27292  0 +     39228 C
e Lemur_catta.scaffold_1                                258409979  0 - 285822530 C
e Indri_indri.k141_2197838                                    116  0 +      3484 C
e Ictidomys_tridecemlineatus.JH393315.1                   7129728  0 +  13083262 C
e Hystrix_cristata.HysCri_scaffold_50788                     7688 1865 +     22540 I
e Heterocephalus_glaber.JH602058.1                        2560252  0 +  31725842 C
e Hapalemur_occidentalis.k141_797938                        48308  0 -     54384 C
e Hapalemur_meridionalis.k141_186231                        31681  0 -     42470 C
e Hapalemur_griseus.k141_1387522                             8432  0 +     56096 C
e Hapalemur_gilberti.k141_279011                             3105  0 -     11661 C
e Hapalemur_alaotrensis.k141_1280836                         4627  0 +     10286 C
e Graphiurus_murinus.GraMur_scaffold_4493                   79386  0 +    118900 C
e Galagoides_demidoff.k141_1769638                          13144  0 +     27357 C
e Galago_senegalensis.k141_964197                           16038  0 -     43889 C
e Galago_moholi.ctg555                                     213680  0 -    847004 C
e Fukomys_damarensis.KN123630.1                          13895732  0 -  19261668 C
e Eulemur_sanfordi.k141_186399                              18623  0 -     29447 C
e Eulemur_rufus.k141_1620292                                35891  0 +     46535 C
e Eulemur_rubriventer.k141_411740                           21157  0 +     26808 C
e Eulemur_mongoz.k141_825972                                18693  0 +     27497 C
e Eulemur_macaco.k141_747087                                 2027  0 -     19505 C
e Eulemur_fulvus.k141_653297                                14043  0 +    109717 C
e Eulemur_flavifrons.k141_903901                            10560  0 +     60246 C
e Eulemur_coronatus.k141_3240342                            14235  0 +     36558 C
e Eulemur_collaris.k141_1015201                              1102  0 -      4292 C
e Eulemur_albifrons.k141_715837                              7832  0 +     13586 C
e Ellobius_talpinus.LOJH01198462.1                           1213  0 -      1901 C
e Ellobius_lutescens.LOEQ01003611.1                        243471  0 -    369425 C
e Dolichotis_patagonum.DolPat_scaffold_14102                39604  0 -     73477 C
e Daubentonia_madagascariensis.ctg11                     16847687  0 +  31942871 C
e Dasyprocta_punctata.DasPun_flattened_line_634             61584  0 -    236241 C
e Cuniculus_paca.CunPac_flattened_line_16637                20446  0 +     26546 C
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 32592 1717 -     67205 I
e Ctenodactylus_gundi.CteGun_scaffold_447                  213664  0 -    956709 C
e Cricetulus_griseus.LT883672.1                          53034667  0 +  72327488 C
e Cricetomys_gambianus.CriGam_scaffold_949                 282297  0 -    399297 C
e Chinchilla_lanigera.JH721867.1                         15963245 964 +  43084221 I
e Cheirogaleus_medius.k141_133808                           10871  0 +     13308 C
e Cheirogaleus_major.k141_1157592                           61827  0 -     68416 C
e Cephalopachus_bancanus.k141_702587                         8788 3391 +     21754 I
e Cavia_tschudii.CavTsc_scaffold_488                       177725 1742 +    436027 I
e Cavia_porcellus.DS562889.1                             15799553 1742 -  24440124 I
e Cavia_aperea.AVPZ01000278.1                            15787615 1741 -  24422027 I
e Carlito_syrichta.NW_007248099.1                          309764 3411 +    345090 I
e Avahi_peyrierasi.k141_798820                               3156  0 +      6337 C
e Avahi_laniger.k141_2840928                                 9540  0 -     16375 C
e Arctocebus_calabarensis.k141_587554                        4710  0 +      9265 C
e Acomys_cahirinus.AcoCah_scaffold_1625                    117433  0 -    189883 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               15350 1 +    209709 C
s Allenopithecus_nigroviridis.k141_2469532                   3080 1 -     60446 C
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         3797 1 -     29318 C
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         2733 1 +     38766 C
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          3691 1 -     80423 C
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_1818029                            11844 1 -     18050 t
i Alouatta_belzebul.k141_1818029                        I 192 N 0
s Alouatta_caraya.k141_664908                                 584 1 -     12443 C
i Alouatta_caraya.k141_664908                           I 570 C 0
s Alouatta_discolor.k141_1770213                              162 1 +      8048 c
i Alouatta_discolor.k141_1770213                        N 0 N 0
s Alouatta_juara.k141_2534995                                2061 1 +      4011 C
i Alouatta_juara.k141_2534995                           N 0 C 0
s Alouatta_macconnelli.k141_2318944                           383 1 -     24210 C
i Alouatta_macconnelli.k141_2318944                     N 0 C 0
s Alouatta_nigerrima.k141_2187093                           26965 1 -     30219 C
i Alouatta_nigerrima.k141_2187093                       N 0 C 0
s Alouatta_palliata.k141_564633                               394 1 -      1511 C
i Alouatta_palliata.k141_564633                         n 0 C 0
s Alouatta_puruensis.k141_398195                            43155 1 +     45367 C
i Alouatta_puruensis.k141_398195                        N 0 C 0
s Alouatta_seniculus.k141_790278                             2074 1 -      9835 C
i Alouatta_seniculus.k141_790278                        N 0 C 0
s Aotus_azarae.k141_3170768                                 64018 1 +     78111 C
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            6964 1 +     22701 C
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5750918 1 +   9889416 C
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             7510 1 -    104377 C
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               7512 1 +     23246 C
i Aotus_vociferans.k141_718647                          C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9540775 1 +  39197703 C
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             62048 1 +     85812 C
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                13061 1 +     89302 C
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             17562 1 -     58268 C
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             65556 1 +    119057 C
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               7525 1 -     25888 C
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Cacajao_ayresi.k141_724503                               115422 1 -    171031 C
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 14451 1 +    125063 C
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                16494 1 -    216513 C
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        9037 1 -    134917 C
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Cebus_albifrons.Contig22                               18892262 1 -  29618158 C
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 9806 1 -     26817 C
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                14049 1 +     25043 C
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cercocebus_atys.KQ010443.1                              6557023 1 +   6739814 C
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      28497 1 +     60454 C
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          3704 1 -     21101 C
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         61014 1 -    107033 C
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        3897 1 -     17608 C
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          1056 1 +     45019 C
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           1140 1 +     15177 C
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          3940 1 +     16677 C
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           26107 1 +     35983 C
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11992638 1 +  12117833 C
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46479396 1 +  46592721 C
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      42950 1 -     45581 C
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       3952 1 +     35577 C
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        3725 1 -     25661 C
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        3704 1 -     17744 C
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        23310 1 +     37128 C
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Cheracebus_lucifer.k141_619653                             7080 1 -     18223 C
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             24098 1 +     25473 C
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           43138 1 +     57117 C
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          47817 1 +     54541 C
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chiropotes_israelita.k141_1189915                         72619 1 +    196370 C
i Chiropotes_israelita.k141_1189915                     I 3 C 0
s Chiropotes_sagulatus.k141_773804                          16799 1 +     40510 C
i Chiropotes_sagulatus.k141_773804                      I 3 C 0
s Chlorocebus_aethiops.ctg22                             15141307 1 -  15256731 C
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      35916 1 -     53260 C
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101146475 1 + 101219884 C
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10888460 1 +  10971483 C
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147666388 1 + 156195979 C
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            18371 1 +     23629 C
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Erythrocebus_patas.Contig8                             48778486 1 -  48907691 C
i Erythrocebus_patas.Contig8                            C 0 C 0
s Gorilla_beringei.k141_111300                               7064 1 -     14630 C
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119654164 1 - 195582420 C
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Hoolock_leuconedys.ctg79                                      6754 1 -   7690867 C
i Hoolock_leuconedys.ctg79                                 C 0 I 1206
s Hylobates_abbotti.k141_164775                              1537 1 -      2073 C
i Hylobates_abbotti.k141_164775                         C 0 I 89
s Hylobates_agilis.k141_1362131                               546 1 +      1075 C
i Hylobates_agilis.k141_1362131                         I 71 I 89
s Hylobates_klossii.k141_183401                              1090 1 -      1272 C
i Hylobates_klossii.k141_183401                         I 71 n 90
s Hylobates_pileatus_b.ContigUN                                 14626442 1 -  25970782 C
i Hylobates_pileatus_b.ContigUN                                C 0 I 89
s Hylobates_muelleri.k141_950183                             1138 1 +      2027 C
i Hylobates_muelleri.k141_950183                        C 0 I 89
s Hylobates_pileatus_a.tarseq_592                             35602 1 -     60944 C
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Lagothrix_lagothricha.k141_12968                          51646 1 -    147782 C
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lophocebus_aterrimus.ctg55                             19250110 1 +  19376315 C
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Macaca_arctoides.k141_2201161                             21861 1 +     74745 C
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12708321 1 +  12821369 C
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                 899 1 -     26467 C
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           48766 1 +     63263 C
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                  876 1 -     26361 C
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 4053 1 -      7381 C
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  47291 1 -     79256 C
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196037393 1 + 196197964 C
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11447559 1 +  11645122 C
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   6245 1 -     46448 C
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                3911 1 -     13212 C
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 17588 1 -     55006 C
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43842694 1 +  43892939 C
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               18875 1 -     24607 C
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               6242 1 -     27140 C
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43439272 1 -  43563597 C
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4452086 1 -   4543643 C
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         3837 1 +     29742 C
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Nasalis_larvatus.k141_153429                              10310 1 +     48152 C
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Nomascus_annamensis.k141_224620                             908 1 -      2316 C
i Nomascus_annamensis.k141_224620                       C 0 I 89
s Nomascus_concolor.k141_226614                              3005 1 -      5092 C
i Nomascus_concolor.k141_226614                         C 0 I 89
s Nomascus_gabriellae.k141_1032971                            575 1 -      1918 C
i Nomascus_gabriellae.k141_1032971                      C 0 I 89
s Nomascus_siki_b.tarseq_80                             26757 1 -  18771707 C
i Nomascus_siki_b.tarseq_80                         C 0 I 89
s Nomascus_siki_a.k141_595747                                  4427 1 +      4512 C
i Nomascus_siki_a.k141_595747                             C 0 n 0
s Pan_paniscus.CM003386.1                               127576431 1 - 205426864 C
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120153585 1 - 196562556 C
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Papio_anubis.CM001492.2                               188158073 1 - 188283584 C
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              1165 1 +     25005 C
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47515447 1 +  47705337 C
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 69437 1 -    104429 C
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    7966 1 +     14967 C
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 3831 1 -      7628 C
i Papio_ursinus.k141_1345919                            C 0 C 0
s Piliocolobus_badius.k141_1987485                           3843 1 -      5908 C
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       4461 1 -     17985 C
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            3828 1 +      7694 C
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26742312 1 +  26888534 C
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pithecia_albicans.k141_991845                             45261 1 -     61926 C
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        26644 1 +     78826 C
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                             10692 1 -     15800 C
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        13891 1 -     16101 C
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          7120 1 +      9673 C
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13476120 1 -  19735023 C
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           15023 1 -     31692 C
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       24359 1 +     44506 C
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        24572 1 +     67491 C
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      14811 1 -     98129 C
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     24411 1 +    147771 C
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         1047 1 -     43940 C
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          5130 1 -     55515 C
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         24484 1 +    152463 C
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       2201 1 -    119457 C
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         14207 1 +    134592 C
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          24794 1 -     75465 C
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              188949 1 -    373494 C
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19809596 1 +  19899266 C
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               7590 1 -     15069 C
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              7705 1 +     14865 C
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Pygathrix_cinerea.k141_374971                             31695 1 +     56732 C
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6808192 1 +   6970761 C
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             7581 1 +     18040 C
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rhinopithecus_bieti.k119_554384                            1977 1 -     17045 C
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206379465 1 - 206558726 C
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44858367 1 -  45163003 C
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15674212 1 -  43202129 C
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        6125 1 +     34089 C
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              6067 1 -     60842 C
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              6160 1 +     67014 C
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              6138 1 +     60816 C
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 6075 1 -     76454 C
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17342807 1 -  30362882 C
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         22168 1 -     62485 C
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Semnopithecus_entellus.k141_1572367                        5197 1 +     15331 C
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      10572 1 +     20762 C
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         120577 1 +    130994 C
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           39356 1 +     46263 C
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     32501 1 +     42640 C
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        15523 1 +     30600 C
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        16701 1 -  13920577 C
i Symphalangus_syndactylus.tarseq_24                    C 0 I 88
s Theropithecus_gelada.CM009951.1                       194009604 1 - 194193292 C
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Trachypithecus_auratus.k141_738098                        28844 1 +     38948 C
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   22404 1 -     32910 C
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      4305 1 -     12939 C
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       3733 1 -     14244 C
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           45126 1 -     54611 C
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        2927 1 -     11566 C
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     5111 1 -     15592 C
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          3763 1 +     14371 C
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   2049 1 +     12481 C
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        2030 1 -     24393 C
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       7174 1 -     28054 C
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44661958 1 -  44834318 C
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       4270 1 +     13828 C
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
e Eptesicus_fuscus.JH977687.1                             4708429 237 +   6522550 I
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Petromus_typicus.PetTyp_scaffold_33007                    16921 0 -     36578 C
e Sorex_araneus.JH798170.1                               17769647 0 -  27805282 C
e Dinomys_branickii.DinBra_scaffold_1996                   158442 1030 +    228994 I
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           4051 456 -      6963 I
e Oryctolagus_cuniculus.CM000803.1                      141878516 2929 + 163896628 I
e Ochotona_princeps.JH802095.1                            4996729 2205 -  23139505 I
e Lepus_americanus.LepAme_scaffold_62849                    15480 2946 +     22452 I
e Perognathus_longimembris.PerPac_flattened_line_19359       1614 38 +     49596 I
e Dipodomys_stephensi.DipSte_scaffold_84338                  1789 28 -     11986 I
e Dipodomys_ordii.KN672545.1                              3659429 30 +   4240102 I
e Suricata_suricatta.SurSur_flattened_line_20339            32401 0 +     62062 C
e Ziphius_cavirostris.ZipCav_flattened_line_60625            1538 2 -     13665 I
e Zalophus_californianus.ZalCal_flattened_line_4097        219280 0 -    227762 C
e Vulpes_lagopus.VulLag_flattened_line_2045                143835 0 -    281493 C
e Vicugna_pacos.KN269600.1                                1527832 0 -   2331223 C
e Ursus_maritimus.KK498671.1                              6519892 0 +  28682327 C
e Uropsilus_gracilis.UroGra_scaffold_69449                   9768 0 +     10241 C
e Tursiops_truncatus.MRVK01000923.1                      69316794 2 -  96451834 I
e Trichechus_manatus.JH594618.1                          16088878 0 +  31416278 C
e Tragulus_javanicus.TraJav_scaffold_14717                   9149 2 +     90398 I
e Tonatia_saurophila.TonSau_scaffold_3334                  137563 275 -    259118 I
e Tapirus_terrestris.TapTer_scaffold_14939                  61041 0 +     99546 C
e Tapirus_indicus.TapInd_scaffold_176                      810399 0 +   1148477 C
e Tamandua_tetradactyla.TamTet_scaffold_26877               16259 379 +     45698 I
e Tadarida_brasiliensis.TadBra_scaffold_61492                1822 242 +     20549 I
e Sus_scrofa.CM000824.4                                 189273670 1086 + 218635234 I
e Spilogale_gracilis.SpiGra_flattened_line_905             238244 0 -    276980 C
e Solenodon_paradoxus.SolPar_flattened_line_1012            23185 0 +    739146 C
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   39231 0 -    114521 C
e Saiga_tatarica.SaiTat_scaffold_1069354                      105 0 -       709 C
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Rhinolophus_sinicus.LVEH01000179.1                      1792212 2 +   2252614 I
e Rangifer_tarandus.RanTarSib_scaffold_24239                20109 0 +     68503 C
e Puma_concolor.QAVW01000427.1                          131539433 0 - 161321710 C
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Pteronura_brasiliensis.PteBra_flattened_line_1343        249686 0 -    344369 C
e Pteronotus_parnellii.KE867983.1                            5588 252 -     27784 I
e Procavia_capensis.ProCapCap_scaffold_11797                50321 0 -     88779 C
e Platanista_gangetica.PlaMin_flattened_line_72990           8998 2 +     21690 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Phocoena_phocoena.PhoPho_flattened_line_53071              2530 2 +      8220 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    120818 0 -    135482 C
e Pantholops_hodgsonii.KE114631.1                         1071126 0 -   1292953 C
e Panthera_tigris.KE721879.1                              5032785 0 -   6340057 C
e Panthera_pardus.KV860323.1                              3643137 0 +  18214204 C
e Panthera_onca.PanOnc_flattened_line_1615                  39322 0 +    295523 C
e Ovis_canadensis.OviCan_scaffold_6251                      83485 0 +    140051 C
e Ovis_aries.CM001582.2                                 134082257 0 - 275406953 C
e Otocyon_megalotis.JAEUCK010005121.1                      314612 0 -    505867 C
e Orycteropus_afer.OryAfe_flattened_line_13509              63439 0 -     66828 C
e Orcinus_orca.KB316965.1                                 7228065 2 -   7562323 I
e Okapia_johnstoni.LVCL01S0017931.1                         41334 0 +     78940 C
e Odocoileus_virginianus.KZ101650.1                       1083245 0 +   1425656 C
e Odobenus_rosmarus.KB229369.1                             684428 0 -   3126709 C
e Nyctereutes_procyonoides.CAJHUB010000786.1                37467 0 +   3668941 C
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Neophocaena_asiaeorientalis.KZ688543.1                  3954389 2 -   4490290 I
e Neomonachus_schauinslandi.NINY01007774.1                4489721 0 -  14209539 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             6589 379 -      8794 I
e Myotis_myotis.MyoMyo_scaffold_6123                        13515 236 +     66751 I
e Myotis_lucifugus.GL429887.1                             3468272 238 -   3747815 I
e Myotis_davidii.KB114863.1                               5022194 233 +   6462685 I
e Myotis_brandtii.KE161952.1                               970769 237 +   8389877 I
e Mustela_putorius.JH417978.1                             4427567 0 -  28371801 C
e Murina_feae.MurFea_scaffold_2254                          23900 236 -    100666 I
e Mungos_mungo.MunMun_flattened_line_8729                  149746 0 -    168139 C
e Moschus_moschiferus.MosMos_scaffold_78805                  5813 0 -     19904 C
e Mormoops_blainvillei.MorMeg_scaffold_2952                162937 259 +    265003 I
e Monodon_monoceros.MonMon_M_scaffold_5598                 149798 2 +    154973 I
e Mirounga_angustirostris.MirAng_flattened_line_8852        16322 0 -    104932 C
e Miniopterus_schreibersii.MinSch_scaffold_24116            36998 214 +     45743 I
e Miniopterus_natalensis.LDJU01000022.1                   8212509 213 +  10048721 I
e Micronycteris_hirsuta.MicHir_scaffold_37978               24387 274 -     32043 I
e Microgale_talazaci.MicTal_scaffold_34660                  40768 0 -     48017 C
e Mesoplodon_bidens.MesBid_scaffold_96348                    2003 2 -     12939 I
e Mellivora_capensis.MelCap_flattened_line_15433             5726 0 -     87323 C
e Megaderma_lyra.MegLyr_scaffold_3562                       65026 2 -    234502 I
e Manis_pentadactyla.KN017078.1                             39380 0 +     58827 C
e Manis_javanica.JSZB01003966.1                            149232 0 +    252755 C
e Lycaon_pictus.CM007556.1                               11094608 0 +  39895028 C
e Loxodonta_africana.GL010040.1                          20597894 0 -  62548349 C
e Lipotes_vexillifer.KE558548.1                            139369 2 +   3060487 I
e Leptonychotes_weddellii.KB714749.1                      3090826 0 -   3498232 C
e Lasiurus_borealis.LasBor_scaffold_59542                    5042 241 +     26176 I
e Kogia_breviceps.KogBre_flattened_line_35920               26998 2 +     37189 I
e Inia_geoffrensis.IniGeo_flattened_line_66725              12417 2 +     17520 I
e Hyaena_hyaena.HyaHya_flattened_line_20729                 22640 0 -     67322 C
e Hipposideros_galeritus.HipGal_scaffold_52959                377 2 +     26078 I
e Hipposideros_armiger.JXIK01001085.1                      282608 2 -    477199 I
e Hippopotamus_amphibius.HipAmp_scaffold_1308              150208 0 +    277961 C
e Heterohyrax_brucei.HetBruBak_scaffold_13814               68359 0 -    108006 C
e Hemitragus_hylocrius.HemHyl_scaffold_16669                32467 0 -     91191 C
e Helogale_parvula.HelPar_flattened_line_22962              22066 0 +     53719 C
e Giraffa_tippelskirchi.LVKQ01S012154.1                    185599 0 -    189561 C
e Felis_nigripes.FelNig_flattened_line_8080                 26394 0 +     52776 C
e Felis_catus_fca126.CM031420.1                         129285299 0 - 158578461 C
e Eubalaena_japonica.EubJap_flattened_line_7756             64881 0 +     89355 C
e Eschrichtius_robustus.EscRob_flattened_line_685          318424 0 +    330699 C
e Equus_przewalskii.ATBW01073585.1                          16166 0 +     92910 C
e Equus_caballus.CM000402.2                              13354676 0 +  41866177 C
e Equus_asinus.JREZ01000062.1                             5856176 0 -   7175178 C
e Enhydra_lutris.KZ291749.1                              85876835 0 +  99434291 C
e Elephantulus_edwardii.JH947210.1                        7830035 1277 +  15467074 I
e Elaphurus_davidianus.JRFZ01086400.1                     1495795 0 +   1727528 C
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Echinops_telfairi.JH980316.1                           22999931 2 -  44670279 I
e Diceros_bicornis.DicBicMic_scaffold_9545                   6452 0 +    151128 C
e Dicerorhinus_sumatrensis.PEKH010003161.1                 325812 0 +    993696 C
e Desmodus_rotundus.KZ672188.1                           18700517 262 -  18957592 I
e Delphinapterus_leucas.KZ290064.1                       80040207 0 -  96802777 C
e Dasypus_novemcinctus.JH568778.1                          185121 383 -   6883506 I
e Cryptoprocta_ferox.CryFer_flattened_line_19014            56919 0 -     70449 C
e Crocidura_indochinensis.CroInd_scaffold_27484              1226 0 -     22648 C
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1337 2 -      5782 I
e Condylura_cristata.JH655880.1                          60621791 0 +  78930452 C
e Choloepus_hoffmanni.KN194586.1                           763329 503 +    964067 I
e Choloepus_didactylus.ChoDid_scaffold_36182                18024 504 -     21363 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_160623         6920 0 -      9338 C
e Catagonus_wagneri.CatWag_scaffold_1305                   162277 0 -    276539 C
e Carollia_perspicillata.CarPer_scaffold_4436               61226 261 +     67245 I
e Capra_hircus.CM004562.1                               135711414 0 - 157403528 C
e Capra_aegagrus.CM003214.1                              21330197 0 + 157394656 C
e Canis_lupus_orion.HG994411.1                           16461937 0 -  44759192 C
e Canis_lupus_familiaris.chr31                           11095152 0 +  39895921 C
e Canis_lupus_dingo.QKWQ01001993.1                       11272441 0 -  35597290 C
e Canis_lupus_VD.CanFam_VD_scaffold_16982                   20732 0 +     87036 C
e CanFam4.chr31                                          11525758 0 +  39901454 C
e Camelus_ferus.KB016973.1                                2976160 0 +   6889770 C
e Camelus_dromedarius.KN271192.1                           400424 0 -  15254737 C
e Camelus_bactrianus.KN276303.1                           3222722 0 -   8989139 C
e Bubalus_bubalis.KI419065.1                               674242 0 +   1914593 C
e Bos_taurus.CM000177.6                                  22664479 0 + 158972876 C
e Bos_mutus.JH883513.1                                     418090 0 +    998990 C
e Bos_indicus.CM003021.1                                 22955825 0 + 161108492 C
e Bison_bison.KN264915.1                                   301727 0 -   6870073 C
e Beatragus_hunteri.BeaHun_scaffold_21644                   47579 0 -     72089 C
e Balaenoptera_bonaerensis.DF502048.1                        8754 0 -     13118 C
e Balaenoptera_acutorostrata.KI537095.1                  26383581 0 +  51448160 C
e Artibeus_jamaicensis.ArtJam_scaffold_41619                10440 261 -     29036 I
e Antilocapra_americana.AntAmePen_scaffold_27338             2548 0 +     55446 C
e Anoura_caudifer.AnoCau_scaffold_422                      392020 257 -    631301 I
e Ammotragus_lervia.NIVO01013474.1                        3525117 0 +   4113121 C
e Ailurus_fulgens.LNAC01000003.1                          7099380 0 -  16596857 C
e Ailuropoda_melanoleuca.LNAT01000321.1                  10662594 0 +  23371972 C
e Acinonyx_jubatus.LLWD01000356.1                         2038912 0 +   3721120 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           20901 0 -    119109 C
e Glis_glis.GliGli_scaffold_79770                           15993 0 -     18683 C
e Zapus_hudsonius.ZapHud_scaffold_64392                     20218 0 -     20485 C
e Jaculus_jaculus.JH725517.1                              8577088 0 +  11848649 C
e Allactaga_bullata.AllBul_scaffold_70162                   21404 0 -     22067 C
e Galeopterus_variegatus.GalVar_scaffold_354               159184 0 +    324696 C
e Microtus_ochrogaster.CM001673.1                        22823881 0 -  98408828 C
e Xerus_inauris.XerIna_scaffold_7898                       128400 2868 -    134049 I
e Varecia_variegata.k141_775891                             27530 0 -     33872 C
e Varecia_rubra.k141_432109                                  7995 0 -     20643 C
e Tupaia_tana.TupTan_flattened_line_68454                    9338 0 +     13056 C
e Tupaia_chinensis.KB320831.1                             2797404 0 -   3938065 C
e Tarsius_wallacei.k141_48636                               60532 3805 +     65473 I
e Tarsius_lariang.k141_609102                               27216 3812 +     42269 I
e Spermophilus_dauricus.KZ294190.1                        2243603 0 +   2842873 C
e Sigmodon_hispidus.SigHis_scaffold_11332                  104689 0 -    120886 C
e Rattus_norvegicus.chr11                                13917336 0 +  90463843 C
e Psammomys_obesus.NESX01026517.1                           37921 0 +     77221 C
e Propithecus_verreauxi.k141_158021                         42002 0 -     48185 C
e Propithecus_tattersalli.k141_907138                       19738 0 -     53241 C
e Propithecus_perrieri.k141_7554                            20103 0 +     27322 C
e Propithecus_edwardsi.k141_1317105                         38180 0 -     44753 C
e Propithecus_diadema.k141_577245                           45793 0 +     52369 C
e Propithecus_coronatus.k141_1353159                         6446 0 +     11805 C
e Propithecus_coquerelli.NW_012147863.1                     20390 0 -     30946 C
e Prolemur_simus.MPIZ01000048.1                           6851355 0 +  12164890 C
e Peromyscus_maniculatus.KI615518.1                       4955125 0 -   8017169 C
e Perodicticus_potto.k141_1136815                           10207 0 +     61070 C
e Perodicticus_ibeanus.k141_117958                           9080 0 -     23713 C
e Otolemur_garnettii.GL873528.1                          18011493 0 -  38779656 C
e Otolemur_crassicaudatus.k141_505435                        3512 0 -     53940 C
e Onychomys_torridus.OnyTor_scaffold_12578                  42756 0 +     62360 C
e Ondatra_zibethicus.OndZib_scaffold_6821                  130071 0 +    145789 C
e Octodon_degus.JH651621.1                                3687420 1881 +  10294119 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65678347 0 +  89412551 C
e Nycticebus_coucang.k141_771591                            13545 0 +     16181 C
e Nycticebus_bengalensis.LG16                            65570136 0 -  95554990 C
e Nannospalax_galili.KL201303.1                            119867 0 +    362372 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     91920 1922 -    117718 I
e Muscardinus_avellanarius.MusAve_scaffold_9643             14525 0 +     98495 C
e Mus_spretus.CM004110.1                                 74336277 0 +  97876770 C
e Mus_pahari.LT608305.1                                  67559927 0 +  89017189 C
e Mus_musculus.chr16                                     75493550 0 +  98207768 C
e Mus_caroli.LT608236.1                                  70771497 0 +  92629107 C
e Mirza_zaza.k141_593947                                     4089 0 -     12809 C
e Microcebus_murinus.CM007691.1                          16513035 0 +  47401472 C
e Mesocricetus_auratus.KB708139.1                         1051192 0 -  26018355 C
e Meriones_unguiculatus.MerUng_scaffold_52233               15570 0 +     15977 C
e Marmota_marmota.CZRN01000005.1                         36877588 0 +  64221397 C
e Loris_tardigradus.ctg97                                 3781302 0 +   6799190 C
e Loris_lydekkerianus.k141_550999                           13563 0 +     84689 C
e Lepilemur_septentrionalis.k141_710646                      1084 0 -     13103 C
e Lepilemur_ruficaudatus.k141_574529                        35037 0 -     38897 C
e Lepilemur_dorsalis.k141_134267                            56656 0 +     63517 C
e Lepilemur_ankaranensis.k141_884009                        27292 0 +     39228 C
e Lemur_catta.scaffold_1                                258409979 0 - 285822530 C
e Indri_indri.k141_2197838                                    116 0 +      3484 C
e Ictidomys_tridecemlineatus.JH393315.1                   7129728 0 +  13083262 C
e Hystrix_cristata.HysCri_scaffold_50788                     7688 1865 +     22540 I
e Heterocephalus_glaber.JH602058.1                        2560252 0 +  31725842 C
e Hapalemur_occidentalis.k141_797938                        48308 0 -     54384 C
e Hapalemur_meridionalis.k141_186231                        31681 0 -     42470 C
e Hapalemur_griseus.k141_1387522                             8432 0 +     56096 C
e Hapalemur_gilberti.k141_279011                             3105 0 -     11661 C
e Hapalemur_alaotrensis.k141_1280836                         4627 0 +     10286 C
e Graphiurus_murinus.GraMur_scaffold_4493                   79386 0 +    118900 C
e Galagoides_demidoff.k141_1769638                          13144 0 +     27357 C
e Galago_senegalensis.k141_964197                           16038 0 -     43889 C
e Galago_moholi.ctg555                                     213680 0 -    847004 C
e Fukomys_damarensis.KN123630.1                          13895732 0 -  19261668 C
e Eulemur_sanfordi.k141_186399                              18623 0 -     29447 C
e Eulemur_rufus.k141_1620292                                35891 0 +     46535 C
e Eulemur_rubriventer.k141_411740                           21157 0 +     26808 C
e Eulemur_mongoz.k141_825972                                18693 0 +     27497 C
e Eulemur_macaco.k141_747087                                 2027 0 -     19505 C
e Eulemur_fulvus.k141_653297                                14043 0 +    109717 C
e Eulemur_flavifrons.k141_903901                            10560 0 +     60246 C
e Eulemur_coronatus.k141_3240342                            14235 0 +     36558 C
e Eulemur_collaris.k141_1015201                              1102 0 -      4292 C
e Eulemur_albifrons.k141_715837                              7832 0 +     13586 C
e Ellobius_talpinus.LOJH01198462.1                           1213 0 -      1901 C
e Ellobius_lutescens.LOEQ01003611.1                        243471 0 -    369425 C
e Dolichotis_patagonum.DolPat_scaffold_14102                39604 0 -     73477 C
e Daubentonia_madagascariensis.ctg11                     16847687 0 +  31942871 C
e Dasyprocta_punctata.DasPun_flattened_line_634             61584 0 -    236241 C
e Cuniculus_paca.CunPac_flattened_line_16637                20446 0 +     26546 C
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 32592 1717 -     67205 I
e Ctenodactylus_gundi.CteGun_scaffold_447                  213664 0 -    956709 C
e Cricetulus_griseus.LT883672.1                          53034667 0 +  72327488 C
e Cricetomys_gambianus.CriGam_scaffold_949                 282297 0 -    399297 C
e Chinchilla_lanigera.JH721867.1                         15963245 964 +  43084221 I
e Cheirogaleus_medius.k141_133808                           10871 0 +     13308 C
e Cheirogaleus_major.k141_1157592                           61827 0 -     68416 C
e Cephalopachus_bancanus.k141_702587                         8788 3391 +     21754 I
e Cavia_tschudii.CavTsc_scaffold_488                       177725 1742 +    436027 I
e Cavia_porcellus.DS562889.1                             15799553 1742 -  24440124 I
e Cavia_aperea.AVPZ01000278.1                            15787615 1741 -  24422027 I
e Carlito_syrichta.NW_007248099.1                          309764 3411 +    345090 I
e Avahi_peyrierasi.k141_798820                               3156 0 +      6337 C
e Avahi_laniger.k141_2840928                                 9540 0 -     16375 C
e Arctocebus_calabarensis.k141_587554                        4710 0 +      9265 C
e Acomys_cahirinus.AcoCah_scaffold_1625                    117433 0 -    189883 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               15351 584 +    209709  
s Allenopithecus_nigroviridis.k141_2469532                   3081 581 -     60446  
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         3798 579 -     29318  
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         2734 581 +     38766  
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          3692 579 -     80423  
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_165776                             15037 587 +     19426  
i Alouatta_belzebul.k141_165776                         N 0 C 0
s Alouatta_caraya.k141_664908                                 585 591 -     12443  
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_786750                               318 587 +      1039  
i Alouatta_discolor.k141_786750                         N 0 N 0
s Alouatta_juara.k141_2534995                                2062 591 +      4011  
i Alouatta_juara.k141_2534995                           C 0 C 0
s Alouatta_macconnelli.k141_2318944                           384 591 -     24210  
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           26966 591 -     30219  
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_564633                               395 591 -      1511  
i Alouatta_palliata.k141_564633                         C 0 I 363
s Alouatta_puruensis.k141_398195                            43156 591 +     45367  
i Alouatta_puruensis.k141_398195                        C 0 C 0
s Alouatta_seniculus.k141_790278                             2075 591 -      9835  
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Aotus_azarae.k141_3170768                                 64019 390 +     78111  
i Aotus_azarae.k141_3170768                             C 0 I 196
s Aotus_griseimembra.k141_3275623                            6965 591 +     22701  
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5750919 590 +   9889416  
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             7511 591 -    104377  
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               7513 591 +     23246  
i Aotus_vociferans.k141_718647                          C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9540776 590 +  39197703  
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             62049 590 +     85812  
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                13062 590 +     89302  
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             17563 590 -     58268  
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             65557 590 +    119057  
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               7526 590 -     25888  
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Cacajao_ayresi.k141_724503                               115423 591 -    171031  
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 14452 587 +    125063  
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                16495 591 -    216513  
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        9038 591 -    134917  
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Cebus_albifrons.Contig22                               18892263 588 -  29618158  
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                 9807 588 -     26817  
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                14050 588 +     25043  
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cercocebus_atys.KQ010443.1                              6557024 577 +   6739814  
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      28498 580 +     60454  
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          3705 577 -     21101  
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         61015 577 -    107033  
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        3898 576 -     17608  
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          1057 581 +     45019  
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           1141 563 +     15177  
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          3941 581 +     16677  
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           26108 581 +     35983  
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11992639 581 +  12117833  
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46479397 581 +  46592721  
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      42951 581 -     45581  
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       3953 581 +     35577  
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        3726 581 -     25661  
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        3705 581 -     17744  
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        23311 559 +     37128  
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Cheracebus_lucifer.k141_619653                             7081 591 -     18223  
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             24099 591 +     25473  
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           43139 591 +     57117  
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          47818 591 +     54541  
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chiropotes_israelita.k141_1189915                         72620 590 +    196370  
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          16800 591 +     40510  
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15141308 581 -  15256731  
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      35917 581 -     53260  
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101146476 581 + 101219884  
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Colobus_angolensis.KN985967.1                          10888461 579 +  10971483  
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147666389 579 + 156195979  
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            18372 580 +     23629  
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Erythrocebus_patas.Contig8                             48778487 581 -  48907691  
i Erythrocebus_patas.Contig8                            C 0 C 0
s Gorilla_beringei.k141_111300                               7065 583 -     14630  
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119654165 583 - 195582420  
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Hoolock_leuconedys.ctg1393                                    1270 475 +     16319  
i Hoolock_leuconedys.ctg1393                               n 1206 C 0
s Hylobates_abbotti.k141_164775                              1627 446 -      2073  
i Hylobates_abbotti.k141_164775                         I 89 N 0
s Hylobates_agilis.k141_1362131                               636 438 +      1075  
i Hylobates_agilis.k141_1362131                         I 89 N 0
s Hylobates_klossii.k141_468230                              1183 475 +      5464  
i Hylobates_klossii.k141_468230                         I 90 C 0
s Hylobates_pileatus_b.ContigUN                                 14626532 475 -  25970782  
i Hylobates_pileatus_b.ContigUN                                I 89 C 0
s Hylobates_muelleri.k141_950183                             1228 475 +      2027  
i Hylobates_muelleri.k141_950183                        I 89 C 0
s Hylobates_pileatus_a.tarseq_592                             35603  89 -     60944  
i Hylobates_pileatus_a.tarseq_592                         C 0 I 75
s Lagothrix_lagothricha.k141_12968                          51647 590 -    147782  
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lophocebus_aterrimus.ctg55                             19250111 577 +  19376315  
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Macaca_arctoides.k141_2201161                             21862 577 +     74745  
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12708322 578 +  12821369  
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                 900 578 -     26467  
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           48767 578 +     63263  
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                  877 578 -     26361  
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 4054 578 -      7381  
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  47292 578 -     79256  
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196037394 578 + 196197964  
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11447560 578 +  11645122  
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   6246 578 -     46448  
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                3912 578 -     13212  
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 17589 578 -     55006  
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43842695 578 +  43892939  
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               18876 578 -     24607  
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               6243 578 -     27140  
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43439273 580 -  43563597  
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4452087 580 -   4543643  
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         3838 581 +     29742  
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Nasalis_larvatus.k141_153429                              10311 568 +     48152  
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Nomascus_annamensis.k141_224620                             998 475 -      2316  
i Nomascus_annamensis.k141_224620                       I 89 C 0
s Nomascus_concolor.k141_226614                              3095 475 -      5092  
i Nomascus_concolor.k141_226614                         I 89 C 0
s Nomascus_gabriellae.k141_1032971                            665 475 -      1918  
i Nomascus_gabriellae.k141_1032971                      I 89 C 0
s Nomascus_siki_b.tarseq_80                             26847 475 -  18771707  
i Nomascus_siki_b.tarseq_80                         I 89 I 365
s Nomascus_siki_a.k141_1035055                                 1408 475 -      3602  
i Nomascus_siki_a.k141_1035055                            I 459 C 0
s Pan_paniscus.CM003386.1                               127576432 578 - 205426864  
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120153586 584 - 196562556  
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Papio_anubis.CM001492.2                               188158074 576 - 188283584  
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              1166 577 +     25005  
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47515448 577 +  47705337  
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 69438 578 -    104429  
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    7967 578 +     14967  
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 3832 578 -      7628  
i Papio_ursinus.k141_1345919                            C 0 C 0
s Piliocolobus_badius.k141_1987485                           3844 575 -      5908  
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       4462 576 -     17985  
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            3829 576 +      7694  
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26742313 576 +  26888534  
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pithecia_albicans.k141_991845                             45262 400 -     61926  
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        26645 393 +     78826  
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                             10693 400 -     15800  
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        13892 400 -     16101  
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          7121 400 +      9673  
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13476121 393 -  19735023  
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           15024 400 -     31692  
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       24360 589 +     44506  
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        24573 589 +     67491  
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      14812 589 -     98129  
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     24412 589 +    147771  
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         1048 589 -     43940  
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          5131 589 -     55515  
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         24485 589 +    152463  
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       2202 586 -    119457  
i Plecturocebus_hoffmannsi.k141_985533                  C 0 I 94
s Plecturocebus_miltoni.k141_841561                         14208 589 +    134592  
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          24795 589 -     75465  
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              188950 579 -    373494  
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19809597 579 +  19899266  
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               7591 570 -     15069  
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              7706 570 +     14865  
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Pygathrix_cinerea.k141_374971                             31696 570 +     56732  
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6808193 570 +   6970761  
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             7582 570 +     18040  
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rhinopithecus_bieti.k119_554384                            1978 554 -     17045  
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206379466 377 - 206558726  
i Rhinopithecus_roxellana.NC_044549.1                   C 0 I 176
s Rhinopithecus_strykeri.ctg4                            44858368 554 -  45163003  
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15674213 590 -  43202129  
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        6126 590 +     34089  
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              6068 590 -     60842  
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              6161 590 +     67014  
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              6139 590 +     60816  
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 6076 590 -     76454  
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17342808 588 -  30362882  
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         22169 588 -     62485  
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Semnopithecus_entellus.k141_1572367                        5198 570 +     15331  
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      10573 570 +     20762  
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         120578 569 +    130994  
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           39357 570 +     46263  
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     32502 570 +     42640  
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        15524 570 +     30600  
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        16790 475 -  13920577  
i Symphalangus_syndactylus.tarseq_24                    I 88 C 0
s Theropithecus_gelada.CM009951.1                       194009605 580 - 194193292  
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Trachypithecus_auratus.k141_738098                        28845 570 +     38948  
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   22405 570 -     32910  
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      4306 570 -     12939  
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       3734 570 -     14244  
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           45127 570 -     54611  
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        2928 570 -     11566  
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     5112 570 -     15592  
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          3764 570 +     14371  
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   2050 570 +     12481  
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        2031 570 -     24393  
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       7175 570 -     28054  
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44661959 570 -  44834318  
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       4271 570 +     13828  
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
e Eptesicus_fuscus.JH977687.1                             4708429 237 +   6522550 I
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590  76 -     47444 I
e Petromus_typicus.PetTyp_scaffold_33007                    16921   0 -     36578 C
e Sorex_araneus.JH798170.1                               17769647   0 -  27805282 C
e Dinomys_branickii.DinBra_scaffold_1996                   158442 1030 +    228994 I
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           4051 456 -      6963 I
e Oryctolagus_cuniculus.CM000803.1                      141878516 2929 + 163896628 I
e Ochotona_princeps.JH802095.1                            4996729 2205 -  23139505 I
e Lepus_americanus.LepAme_scaffold_62849                    15480 2946 +     22452 I
e Perognathus_longimembris.PerPac_flattened_line_19359       1614  38 +     49596 I
e Dipodomys_stephensi.DipSte_scaffold_84338                  1789  28 -     11986 I
e Dipodomys_ordii.KN672545.1                              3659429  30 +   4240102 I
e Suricata_suricatta.SurSur_flattened_line_20339            32401   0 +     62062 C
e Ziphius_cavirostris.ZipCav_flattened_line_60625            1538   2 -     13665 I
e Zalophus_californianus.ZalCal_flattened_line_4097        219280   0 -    227762 C
e Vulpes_lagopus.VulLag_flattened_line_2045                143835   0 -    281493 C
e Vicugna_pacos.KN269600.1                                1527832   0 -   2331223 C
e Ursus_maritimus.KK498671.1                              6519892   0 +  28682327 C
e Uropsilus_gracilis.UroGra_scaffold_69449                   9768   0 +     10241 C
e Tursiops_truncatus.MRVK01000923.1                      69316794   2 -  96451834 I
e Trichechus_manatus.JH594618.1                          16088878   0 +  31416278 C
e Tragulus_javanicus.TraJav_scaffold_14717                   9149   2 +     90398 I
e Tonatia_saurophila.TonSau_scaffold_3334                  137563 275 -    259118 I
e Tapirus_terrestris.TapTer_scaffold_14939                  61041   0 +     99546 C
e Tapirus_indicus.TapInd_scaffold_176                      810399   0 +   1148477 C
e Tamandua_tetradactyla.TamTet_scaffold_26877               16259 379 +     45698 I
e Tadarida_brasiliensis.TadBra_scaffold_61492                1822 242 +     20549 I
e Sus_scrofa.CM000824.4                                 189273670 1086 + 218635234 I
e Spilogale_gracilis.SpiGra_flattened_line_905             238244   0 -    276980 C
e Solenodon_paradoxus.SolPar_flattened_line_1012            23185   0 +    739146 C
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   39231   0 -    114521 C
e Saiga_tatarica.SaiTat_scaffold_1069354                      105   0 -       709 C
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Rhinolophus_sinicus.LVEH01000179.1                      1792212   2 +   2252614 I
e Rangifer_tarandus.RanTarSib_scaffold_24239                20109   0 +     68503 C
e Puma_concolor.QAVW01000427.1                          131539433   0 - 161321710 C
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Pteronura_brasiliensis.PteBra_flattened_line_1343        249686   0 -    344369 C
e Pteronotus_parnellii.KE867983.1                            5588 252 -     27784 I
e Procavia_capensis.ProCapCap_scaffold_11797                50321   0 -     88779 C
e Platanista_gangetica.PlaMin_flattened_line_72990           8998   2 +     21690 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Phocoena_phocoena.PhoPho_flattened_line_53071              2530   2 +      8220 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    120818   0 -    135482 C
e Pantholops_hodgsonii.KE114631.1                         1071126   0 -   1292953 C
e Panthera_tigris.KE721879.1                              5032785   0 -   6340057 C
e Panthera_pardus.KV860323.1                              3643137   0 +  18214204 C
e Panthera_onca.PanOnc_flattened_line_1615                  39322   0 +    295523 C
e Ovis_canadensis.OviCan_scaffold_6251                      83485   0 +    140051 C
e Ovis_aries.CM001582.2                                 134082257   0 - 275406953 C
e Otocyon_megalotis.JAEUCK010005121.1                      314612   0 -    505867 C
e Orycteropus_afer.OryAfe_flattened_line_13509              63439   0 -     66828 C
e Orcinus_orca.KB316965.1                                 7228065   2 -   7562323 I
e Okapia_johnstoni.LVCL01S0017931.1                         41334   0 +     78940 C
e Odocoileus_virginianus.KZ101650.1                       1083245   0 +   1425656 C
e Odobenus_rosmarus.KB229369.1                             684428   0 -   3126709 C
e Nyctereutes_procyonoides.CAJHUB010000786.1                37467   0 +   3668941 C
e Noctilio_leporinus.NocLep_scaffold_12062                  50214  77 +     94413 I
e Neophocaena_asiaeorientalis.KZ688543.1                  3954389   2 -   4490290 I
e Neomonachus_schauinslandi.NINY01007774.1                4489721   0 -  14209539 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             6589 379 -      8794 I
e Myotis_myotis.MyoMyo_scaffold_6123                        13515 236 +     66751 I
e Myotis_lucifugus.GL429887.1                             3468272 238 -   3747815 I
e Myotis_davidii.KB114863.1                               5022194 233 +   6462685 I
e Myotis_brandtii.KE161952.1                               970769 237 +   8389877 I
e Mustela_putorius.JH417978.1                             4427567   0 -  28371801 C
e Murina_feae.MurFea_scaffold_2254                          23900 236 -    100666 I
e Mungos_mungo.MunMun_flattened_line_8729                  149746   0 -    168139 C
e Moschus_moschiferus.MosMos_scaffold_78805                  5813   0 -     19904 C
e Mormoops_blainvillei.MorMeg_scaffold_2952                162937 259 +    265003 I
e Monodon_monoceros.MonMon_M_scaffold_5598                 149798   2 +    154973 I
e Mirounga_angustirostris.MirAng_flattened_line_8852        16322   0 -    104932 C
e Miniopterus_schreibersii.MinSch_scaffold_24116            36998 214 +     45743 I
e Miniopterus_natalensis.LDJU01000022.1                   8212509 213 +  10048721 I
e Micronycteris_hirsuta.MicHir_scaffold_37978               24387 274 -     32043 I
e Microgale_talazaci.MicTal_scaffold_34660                  40768   0 -     48017 C
e Mesoplodon_bidens.MesBid_scaffold_96348                    2003   2 -     12939 I
e Mellivora_capensis.MelCap_flattened_line_15433             5726   0 -     87323 C
e Megaderma_lyra.MegLyr_scaffold_3562                       65026   2 -    234502 I
e Manis_pentadactyla.KN017078.1                             39380   0 +     58827 C
e Manis_javanica.JSZB01003966.1                            149232   0 +    252755 C
e Lycaon_pictus.CM007556.1                               11094608   0 +  39895028 C
e Loxodonta_africana.GL010040.1                          20597894   0 -  62548349 C
e Lipotes_vexillifer.KE558548.1                            139369   2 +   3060487 I
e Leptonychotes_weddellii.KB714749.1                      3090826   0 -   3498232 C
e Lasiurus_borealis.LasBor_scaffold_59542                    5042 241 +     26176 I
e Kogia_breviceps.KogBre_flattened_line_35920               26998   2 +     37189 I
e Inia_geoffrensis.IniGeo_flattened_line_66725              12417   2 +     17520 I
e Hyaena_hyaena.HyaHya_flattened_line_20729                 22640   0 -     67322 C
e Hipposideros_galeritus.HipGal_scaffold_52959                377   2 +     26078 I
e Hipposideros_armiger.JXIK01001085.1                      282608   2 -    477199 I
e Hippopotamus_amphibius.HipAmp_scaffold_1308              150208   0 +    277961 C
e Heterohyrax_brucei.HetBruBak_scaffold_13814               68359   0 -    108006 C
e Hemitragus_hylocrius.HemHyl_scaffold_16669                32467   0 -     91191 C
e Helogale_parvula.HelPar_flattened_line_22962              22066   0 +     53719 C
e Giraffa_tippelskirchi.LVKQ01S012154.1                    185599   0 -    189561 C
e Felis_nigripes.FelNig_flattened_line_8080                 26394   0 +     52776 C
e Felis_catus_fca126.CM031420.1                         129285299   0 - 158578461 C
e Eubalaena_japonica.EubJap_flattened_line_7756             64881   0 +     89355 C
e Eschrichtius_robustus.EscRob_flattened_line_685          318424   0 +    330699 C
e Equus_przewalskii.ATBW01073585.1                          16166   0 +     92910 C
e Equus_caballus.CM000402.2                              13354676   0 +  41866177 C
e Equus_asinus.JREZ01000062.1                             5856176   0 -   7175178 C
e Enhydra_lutris.KZ291749.1                              85876835   0 +  99434291 C
e Elephantulus_edwardii.JH947210.1                        7830035 1277 +  15467074 I
e Elaphurus_davidianus.JRFZ01086400.1                     1495795   0 +   1727528 C
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Echinops_telfairi.JH980316.1                           22999931   2 -  44670279 I
e Diceros_bicornis.DicBicMic_scaffold_9545                   6452   0 +    151128 C
e Dicerorhinus_sumatrensis.PEKH010003161.1                 325812   0 +    993696 C
e Desmodus_rotundus.KZ672188.1                           18700517 262 -  18957592 I
e Delphinapterus_leucas.KZ290064.1                       80040207   0 -  96802777 C
e Dasypus_novemcinctus.JH568778.1                          185121 383 -   6883506 I
e Cryptoprocta_ferox.CryFer_flattened_line_19014            56919   0 -     70449 C
e Crocidura_indochinensis.CroInd_scaffold_27484              1226   0 -     22648 C
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1337   2 -      5782 I
e Condylura_cristata.JH655880.1                          60621791   0 +  78930452 C
e Choloepus_hoffmanni.KN194586.1                           763329 503 +    964067 I
e Choloepus_didactylus.ChoDid_scaffold_36182                18024 504 -     21363 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_160623         6920   0 -      9338 C
e Catagonus_wagneri.CatWag_scaffold_1305                   162277   0 -    276539 C
e Carollia_perspicillata.CarPer_scaffold_4436               61226 261 +     67245 I
e Capra_hircus.CM004562.1                               135711414   0 - 157403528 C
e Capra_aegagrus.CM003214.1                              21330197   0 + 157394656 C
e Canis_lupus_orion.HG994411.1                           16461937   0 -  44759192 C
e Canis_lupus_familiaris.chr31                           11095152   0 +  39895921 C
e Canis_lupus_dingo.QKWQ01001993.1                       11272441   0 -  35597290 C
e Canis_lupus_VD.CanFam_VD_scaffold_16982                   20732   0 +     87036 C
e CanFam4.chr31                                          11525758   0 +  39901454 C
e Camelus_ferus.KB016973.1                                2976160   0 +   6889770 C
e Camelus_dromedarius.KN271192.1                           400424   0 -  15254737 C
e Camelus_bactrianus.KN276303.1                           3222722   0 -   8989139 C
e Bubalus_bubalis.KI419065.1                               674242   0 +   1914593 C
e Bos_taurus.CM000177.6                                  22664479   0 + 158972876 C
e Bos_mutus.JH883513.1                                     418090   0 +    998990 C
e Bos_indicus.CM003021.1                                 22955825   0 + 161108492 C
e Bison_bison.KN264915.1                                   301727   0 -   6870073 C
e Beatragus_hunteri.BeaHun_scaffold_21644                   47579   0 -     72089 C
e Balaenoptera_bonaerensis.DF502048.1                        8754   0 -     13118 C
e Balaenoptera_acutorostrata.KI537095.1                  26383581   0 +  51448160 C
e Artibeus_jamaicensis.ArtJam_scaffold_41619                10440 261 -     29036 I
e Antilocapra_americana.AntAmePen_scaffold_27338             2548   0 +     55446 C
e Anoura_caudifer.AnoCau_scaffold_422                      392020 257 -    631301 I
e Ammotragus_lervia.NIVO01013474.1                        3525117   0 +   4113121 C
e Ailurus_fulgens.LNAC01000003.1                          7099380   0 -  16596857 C
e Ailuropoda_melanoleuca.LNAT01000321.1                  10662594   0 +  23371972 C
e Acinonyx_jubatus.LLWD01000356.1                         2038912   0 +   3721120 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           20901   0 -    119109 C
e Glis_glis.GliGli_scaffold_79770                           15993   0 -     18683 C
e Zapus_hudsonius.ZapHud_scaffold_64392                     20218   0 -     20485 C
e Jaculus_jaculus.JH725517.1                              8577088   0 +  11848649 C
e Allactaga_bullata.AllBul_scaffold_70162                   21404   0 -     22067 C
e Galeopterus_variegatus.GalVar_scaffold_354               159184   0 +    324696 C
e Microtus_ochrogaster.CM001673.1                        22823881   0 -  98408828 C
e Xerus_inauris.XerIna_scaffold_7898                       128400 2868 -    134049 I
e Varecia_variegata.k141_775891                             27530   0 -     33872 C
e Varecia_rubra.k141_432109                                  7995   0 -     20643 C
e Tupaia_tana.TupTan_flattened_line_68454                    9338   0 +     13056 C
e Tupaia_chinensis.KB320831.1                             2797404   0 -   3938065 C
e Tarsius_wallacei.k141_48636                               60532 3805 +     65473 I
e Tarsius_lariang.k141_609102                               27216 3812 +     42269 I
e Spermophilus_dauricus.KZ294190.1                        2243603   0 +   2842873 C
e Sigmodon_hispidus.SigHis_scaffold_11332                  104689   0 -    120886 C
e Rattus_norvegicus.chr11                                13917336   0 +  90463843 C
e Psammomys_obesus.NESX01026517.1                           37921   0 +     77221 C
e Propithecus_verreauxi.k141_158021                         42002   0 -     48185 C
e Propithecus_tattersalli.k141_907138                       19738   0 -     53241 C
e Propithecus_perrieri.k141_7554                            20103   0 +     27322 C
e Propithecus_edwardsi.k141_1317105                         38180   0 -     44753 C
e Propithecus_diadema.k141_577245                           45793   0 +     52369 C
e Propithecus_coronatus.k141_1353159                         6446   0 +     11805 C
e Propithecus_coquerelli.NW_012147863.1                     20390   0 -     30946 C
e Prolemur_simus.MPIZ01000048.1                           6851355   0 +  12164890 C
e Peromyscus_maniculatus.KI615518.1                       4955125   0 -   8017169 C
e Perodicticus_potto.k141_1136815                           10207   0 +     61070 C
e Perodicticus_ibeanus.k141_117958                           9080   0 -     23713 C
e Otolemur_garnettii.GL873528.1                          18011493   0 -  38779656 C
e Otolemur_crassicaudatus.k141_505435                        3512   0 -     53940 C
e Onychomys_torridus.OnyTor_scaffold_12578                  42756   0 +     62360 C
e Ondatra_zibethicus.OndZib_scaffold_6821                  130071   0 +    145789 C
e Octodon_degus.JH651621.1                                3687420 1881 +  10294119 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65678347   0 +  89412551 C
e Nycticebus_coucang.k141_771591                            13545   0 +     16181 C
e Nycticebus_bengalensis.LG16                            65570136   0 -  95554990 C
e Nannospalax_galili.KL201303.1                            119867   0 +    362372 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     91920 1922 -    117718 I
e Muscardinus_avellanarius.MusAve_scaffold_9643             14525   0 +     98495 C
e Mus_spretus.CM004110.1                                 74336277   0 +  97876770 C
e Mus_pahari.LT608305.1                                  67559927   0 +  89017189 C
e Mus_musculus.chr16                                     75493550   0 +  98207768 C
e Mus_caroli.LT608236.1                                  70771497   0 +  92629107 C
e Mirza_zaza.k141_593947                                     4089   0 -     12809 C
e Microcebus_murinus.CM007691.1                          16513035   0 +  47401472 C
e Mesocricetus_auratus.KB708139.1                         1051192   0 -  26018355 C
e Meriones_unguiculatus.MerUng_scaffold_52233               15570   0 +     15977 C
e Marmota_marmota.CZRN01000005.1                         36877588   0 +  64221397 C
e Loris_tardigradus.ctg97                                 3781302   0 +   6799190 C
e Loris_lydekkerianus.k141_550999                           13563   0 +     84689 C
e Lepilemur_septentrionalis.k141_710646                      1084   0 -     13103 C
e Lepilemur_ruficaudatus.k141_574529                        35037   0 -     38897 C
e Lepilemur_dorsalis.k141_134267                            56656   0 +     63517 C
e Lepilemur_ankaranensis.k141_884009                        27292   0 +     39228 C
e Lemur_catta.scaffold_1                                258409979   0 - 285822530 C
e Indri_indri.k141_2197838                                    116   0 +      3484 C
e Ictidomys_tridecemlineatus.JH393315.1                   7129728   0 +  13083262 C
e Hystrix_cristata.HysCri_scaffold_50788                     7688 1865 +     22540 I
e Heterocephalus_glaber.JH602058.1                        2560252   0 +  31725842 C
e Hapalemur_occidentalis.k141_797938                        48308   0 -     54384 C
e Hapalemur_meridionalis.k141_186231                        31681   0 -     42470 C
e Hapalemur_griseus.k141_1387522                             8432   0 +     56096 C
e Hapalemur_gilberti.k141_279011                             3105   0 -     11661 C
e Hapalemur_alaotrensis.k141_1280836                         4627   0 +     10286 C
e Graphiurus_murinus.GraMur_scaffold_4493                   79386   0 +    118900 C
e Galagoides_demidoff.k141_1769638                          13144   0 +     27357 C
e Galago_senegalensis.k141_964197                           16038   0 -     43889 C
e Galago_moholi.ctg555                                     213680   0 -    847004 C
e Fukomys_damarensis.KN123630.1                          13895732   0 -  19261668 C
e Eulemur_sanfordi.k141_186399                              18623   0 -     29447 C
e Eulemur_rufus.k141_1620292                                35891   0 +     46535 C
e Eulemur_rubriventer.k141_411740                           21157   0 +     26808 C
e Eulemur_mongoz.k141_825972                                18693   0 +     27497 C
e Eulemur_macaco.k141_747087                                 2027   0 -     19505 C
e Eulemur_fulvus.k141_653297                                14043   0 +    109717 C
e Eulemur_flavifrons.k141_903901                            10560   0 +     60246 C
e Eulemur_coronatus.k141_3240342                            14235   0 +     36558 C
e Eulemur_collaris.k141_1015201                              1102   0 -      4292 C
e Eulemur_albifrons.k141_715837                              7832   0 +     13586 C
e Ellobius_talpinus.LOJH01198462.1                           1213   0 -      1901 C
e Ellobius_lutescens.LOEQ01003611.1                        243471   0 -    369425 C
e Dolichotis_patagonum.DolPat_scaffold_14102                39604   0 -     73477 C
e Daubentonia_madagascariensis.ctg11                     16847687   0 +  31942871 C
e Dasyprocta_punctata.DasPun_flattened_line_634             61584   0 -    236241 C
e Cuniculus_paca.CunPac_flattened_line_16637                20446   0 +     26546 C
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 32592 1717 -     67205 I
e Ctenodactylus_gundi.CteGun_scaffold_447                  213664   0 -    956709 C
e Cricetulus_griseus.LT883672.1                          53034667   0 +  72327488 C
e Cricetomys_gambianus.CriGam_scaffold_949                 282297   0 -    399297 C
e Chinchilla_lanigera.JH721867.1                         15963245 964 +  43084221 I
e Cheirogaleus_medius.k141_133808                           10871   0 +     13308 C
e Cheirogaleus_major.k141_1157592                           61827   0 -     68416 C
e Cephalopachus_bancanus.k141_702587                         8788 3391 +     21754 I
e Cavia_tschudii.CavTsc_scaffold_488                       177725 1742 +    436027 I
e Cavia_porcellus.DS562889.1                             15799553 1742 -  24440124 I
e Cavia_aperea.AVPZ01000278.1                            15787615 1741 -  24422027 I
e Carlito_syrichta.NW_007248099.1                          309764 3411 +    345090 I
e Avahi_peyrierasi.k141_798820                               3156   0 +      6337 C
e Avahi_laniger.k141_2840928                                 9540   0 -     16375 C
e Arctocebus_calabarensis.k141_587554                        4710   0 +      9265 C
e Acomys_cahirinus.AcoCah_scaffold_1625                    117433   0 -    189883 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               15935 364 +    209709 GGAATTTAGGCAGGAGAACAGGAAATAGAGT----ACATC-aGTAGGT-AAGGGTCATTATGAATATGATAAAATAATAGTTTGGAGGTCTCAGAGAGATTGAAAAATTTTATGTCAGCGTATGAAAGGGAATGATTAAAGGAGGAGTTCAGAGAATGGGATGAATGAAATTGTGACTACAGAGGAGTTGTTAttataagtaacgacgatgcttca-ctcagtccctct---ggaagtgtggtccctgtgctagcagcaacagcatcacctgggaacttactagaactgcatattctcaggttac-acccccagatcttccaaatctgaaattccaatagcaggtctcagcaatctcttATTGTAACACAACTGT
s Allenopithecus_nigroviridis.k141_2469532                   3662 336 -     60446 ggaatttaggcaggagaataggcaagagagt----acctcaaggaggt-aagggtcattgtgaatatgataaaataatagtttggaggtctcagagagattgaaagattttatgtcagggtatgaaagggaatgattaaaggaggagctcagagaatgggatgaatgaagttgtgactacagagaagttgctattataagtaatgacgaTGCTTCA-CTcagtccttct---ggaagtgtggtctctg---tggcagcatcagcatcacctgggagcttaccagaactgcatattctcaggttac-acccccagatctaccaaatcagaaattctaagagcaggcctca--------------------------
i Allenopithecus_nigroviridis.k141_2469532              C 0 I 24
s Allochrocebus_lhoesti.k141_3566948                         4377 339 -     29318 ggaatttaggcaggagaacaggcaagagagt----acctcaaggaggt-aagggtcattgtgaatatgataaaataatagtttggaggtctcagagagattgaaagattttatgtcagggtatgaaagggaatgattaaaggaggagctcagagaacgggacgaatgaagttgtgactacagagaagttgctattataagtaatgatgatgcttca-ctcagtccttct---ggaagtgtagtctctgtgctggcagcatcagcaccacctgggagcttaccagaactgcatattctcaggttac-acccccagatctaccaaatctgaaattctaagagcaggcctca--------------------------
i Allochrocebus_lhoesti.k141_3566948                    C 0 I 24
s Allochrocebus_preussi.k141_1108977                         3315 339 +     38766 ggaatttaggcaggagaacaggcaagagagt----acctcaaggaggt-aagggtcattgtgaatatgataaaataatagtttggaggtctcagagagattgaaagattttatgtcagggtatgaaagggaatgattaaaggaggagctcagagaatgggatgaatgaagttgtgactacagagaagttgctattataagtaatgatgatgcttca-ctcagtccttct---ggaagtgtagtctctgtgctggcagcatcagcatcacctgggagcttaccagaactgcatattctcaggttac-actcccagatctaccaaatctgaaattctaagagcaggcctca--------------------------
i Allochrocebus_preussi.k141_1108977                    C 0 I 24
s Allochrocebus_solatus.k141_371672                          4271 339 -     80423 ggaatttaggcaggagaacaggcaagagagt----acctcaaggaggt-aagggtcattgtgaatatgataaaataatagtttggaggtctcagagagattgaaagattttatgtcagggtatgaaagggaatgattaaaggaggagctcagagaacgggacgaatgaagttgtgactacagagaacttgctattataagtaatgacgatgcttca-ctcagtccttct---ggaagtgtggtctctgtgctggcagcatcagcaccacctgggagcttaccagaactgcatattctcaggttac-acccccagatctaccaaatctgaaattctaagagcaggcctca--------------------------
i Allochrocebus_solatus.k141_371672                     C 0 I 24
s Alouatta_belzebul.k141_165776                             15624 363 +     19426 ggaatttaggcaggagaacagggaa--aatc----acaccaaggaggt-aagggtcactgtgaatatgataaaatgatagtttggaggtctcagagagattgaaagattttatttcaggatatgaaagaggatgattaaaggagaagctcagagaatgggataaatgaaattgtgactacagagaagttgccattataagaaatgacagtgcttga-cccagtcattct---ggaaatgtggtctccgtgttagcagcatcagcatcacctgggaacttactagaactgcttattctcaggcttc-acccctagaactaccaagtctgaaattccaagagtaggactcagcaatctcttgttttaacacaactgt
i Alouatta_belzebul.k141_165776                         C 0 C 0
s Alouatta_caraya.k141_664908                                1176 363 -     12443 ggaatttaggcaggagaacagggaa--aagc----acaccaaggaggt-aagggtcactgtgaatatgataaaatgatagtttggaggtctcagagagattgaaagattttatttcaggatatgaaggagaatgattaaaggagaagctcagagaatgggataaatgaaattgtgactacagagaagttgccattataagaaatgacagtgcttga-cccagtcattct---ggaaatgtggtctccgtgttagcagcatcagcatcacctgggaacttactagaactgcttattctcaggcttc-acccctagaactaccaagtctgaaattccaagagtaggactcagcaatctcttgttttaacacaactgt
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2476351                              899 363 +     41985 ggaatttaggcaggagaacagggaa--aatc----acaccaaggaggt-aagggtcactgtgaatatgataaaatgatagtttggaggtctcagagagattgaaagattttatttcaggatatgaaagaggatgattaaaggagaagctcagagaatgggataaatgaaattgtgactacagagaagttgccattataagaaatgacagtgcttga-cccagtcattct---ggaaatgtggtctccgtgttagcagcatcagcatcacctgggaacttactagaactgcttattctcaggcttc-acccctagaactaccaagtctgaaattccaagagtaggactcagcaatctcttgttttaacacaactgt
i Alouatta_discolor.k141_2476351                        N 0 C 0
s Alouatta_juara.k141_2534995                                2653 363 +      4011 ggaatttaggcaggagaacagggaa--aagc----acaccaaggaggt-aagggtcactgtgaatatgacaaaatgatagtttggaggtctcagagagattgaaagattttatttcaggatatgaaggagaatgattaaaggagaagctcagagaatgggataaatgaaattgtgactacagagaagttgccattataagaaatgacagtgcttga-cccagtcattct---ggaaatgtggtctccgtgttagcagcatcagcatcacctgggaacttactagaactgcttattctcaggcttc-acccctagaactaccaagtctgaaattccaagagtaggactcagcaatctcttgtttcaacacaactgt
i Alouatta_juara.k141_2534995                           C 0 C 0
s Alouatta_macconnelli.k141_2318944                           975 363 -     24210 ggaatttaggcaggagaacagggaa--aagc----acaccaaggaggt-aagggtcactgtgaatatgataaaatgatagtttggaggtctcagagagattgaaagattttatttcaggatatgaaggagaatgattaaaggagaagctcagagaatgggataaatgaaattgtgactacagagaagttgccattataagaaatgacagtgcttga-cccagtcattct---ggaaatgtggtctccgtgttagcagcatcagcatcacctgggaacttactagaactgcttattctcaggcttc-acccctagaactaccaagtctgaaattccaagagtaggactcagcaatctcttgtttcaacacaactgt
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           27557 363 -     30219 ggaatttaggcaggagaacagggaa--aagc----acaccaaggaggt-aagggtcactgtgaatatgataaaatgatagtttggaggtctcagagagattgaaagattttatttcaggatatgaaggagaatgattaaaggagaagctcagagaatgggataaatgaaattgtgactacagagaagttgccattataagaaatgacagtgcttga-cccagtcattct---ggaaatgtggtctccgtgttagcagcatcagcatcacctgggaacttactagaactgcttattctcaggcttc-acccctagaactaccaagtctgaaattccaagagtaggactcagcaatctcttgtttcaacacaactgt
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_2764452                              910 363 -      1435 ggaatttaggcaggagaacagggaa--aagc----acaccaaggaggt-aagggtcactgtgaatatgataaaatgatagtttggaggtctcagagagattgaaagattttatttcaggatatgaaagagaatgattaaaggagaagctcagagaatgggataaatgcaattgtgactacagagaagttgccattataagaaatgacagtgcttga-cccagtcattct---ggaaatgtggtctccgtgttagcagcatcagcatcacctgggaacttactagaactgcttattctcaggcttc-acccctagaactaccaagtctgaaattccaagagtaggactcagcaatctcttgttttaacacaactgt
i Alouatta_palliata.k141_2764452                        I 644 n 363
s Alouatta_puruensis.k141_398195                            43747 363 +     45367 ggaatttaggcaggagaacagggaa--aagc----acaccaaggaggt-aagggtcactgtgaatatgataaaatgatagtttggaggtctcagagagattgaaagattttatttcaggatatgaaagagaatgattaaaggagaagctcagagaatgggataaatgaaattgtgactacagagaagttgccattataagaaatgacagtgcttga-cccagtcattct---ggaaatgtggtctccgtgttagcagcatcagcatcacctgggaacttactagaactgcttattctcaggcttc-acccctagaactaccaagtctgaaattccaagagtaggactcagcaatctcttgttttaacacaactgt
i Alouatta_puruensis.k141_398195                        C 0 C 0
s Alouatta_seniculus.k141_790278                             2666 363 -      9835 ggaatttaggcaggagaacagggaa--aagc----acaccaaggaggt-aagggtcactgtgaatatgacaaaatgatagtttggaggtctcagagagattgaaagattttatttcaggatatgaaggagaatgattaaaggagaagctcagagaatgggataaatgaaattgtgactacagagaagttgccattataagaaatgacagtgcttga-cccagtcattct---ggaaatgtggtctccgtgttagcagcatcagcatcacctgggaacttactagaactgcttattctcaggcttc-acccctagaactaccaagtctgaaattccaagagtaggactcagcaatctcttgtttcaacacaactgt
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Aotus_azarae.k141_3170768                                 64605 363 +     78111 ggaatttaggcaggagaacacgcaa--aatt----acaccaaggaggt-aagggtcactgtgaatatgataaaataatagtttggaggtctcagagagattgaaagattttatttcaagacatacaagagaacgattaaaggagaagctcagagaatgggatgaatgaaattgtgactacagagaagttgccattataagaaatgacactgctttg-ctcagtcattct---ggaaatgtggtcactgtgttagcagcatcagcatcacctgggaactttctagaactgcatattctcaggcttc-acccctagaactaccaaatctgaaattccaagagtaggactcagcaatctcttattttaacataactgt
i Aotus_azarae.k141_3170768                             I 196 C 0
s Aotus_griseimembra.k141_3275623                            7556 363 +     22701 ggaatttaggcagtagaacacgcaa--aatt----acaccaaggaggt-aagggtcactgtgaatatgataaaataatagtttggaggtctcagagagattgaaagattttatttcaagacatacaagagaacgattaaaggagaagctcagagaatgggatgaatgaaattgtgactacagagaagttgccattataagaaatgacactgctttg-ctcagtcattct---ggaaatgtggtcactgtgttagcagcatcagcatcacctgggaacttactagaactgcatattctcaggcttc-acccctagaactaccaaatctgaaattccaagagtaggactcagaaatctcttattttaacataactgt
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5751509 363 +   9889416 GGAATTTAAGCAGGAGAACACGCAA--AATT----ACTCCAAGGAGGT-AAGGGTCACTGtgaatatgataaaataatagtTTGGAGGTCTCAGAGAgattgaaagattttatttcaagaCATACAAGAGAACGATTAAAGGAGAAGCTCAGAGAATGGGATGAATGAAATTGTGACTACAGAGAAGTTGCCATTATAAGAAATGACACTGCTTTG-CTCAGTCATTCT---GGAAATGTGGTCACTGTgttagcagcatcagcatcacctgggaactttcTAGAACTGCATATTCTCAGGCTTC-ACCCCTAGAACTACCAAATCTGAAATTCCAAGAGTAGGACTCAGCAATCTCTTATTTTAACATAACTGT
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             8102 363 -    104377 ggaatttaggcaggagaacacgcaa--aatt----acaccaaggaggt-aagggtcactgtgaatatgataaaataatagtttggaggtctcagagagattgaaagattttatttcaagacatacaagagaacgattaatggagaagctcagagaatgggatgaatgaaattgtgactacagagaagttgccattataagaaatgacactgctttg-ctcagtcattct---ggaaatgtggtcactgtgttagcagcatcagcatcacctgggaacttactagaactgcatattctcaggcttc-acccctagaactaccaaatctgaaattccaagagtaggactcagcaatctcttattttaacataactgt
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               8104 363 +     23246 ggaatttaggcaggagaacacgcaa--aatt----acaccaaggaggt-aagggtcactgtgaatatgataaaataatagtttggaggtctcagagagattgaaagattttatttcaagacatacaagagaacgattaatggagaagctcagagaatgggatgaatgaaattgtgactacagagaagttgccattataagaaatgacactgctttg-ctcagtcattct---ggaaatgtggtcactgtgttagcagcatcagcatcacctgggaacttactagaactgcatattctcaggcttc-acccctagaactaccaaatctgaaattccaagagtaggactcagcaatctcttattttaacataactgt
i Aotus_vociferans.k141_718647                          C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9541366 361 +  39197703 ggaatttaggcagaagaacagggaa--aagc----acaccaaggaggt-aagggtcactgtgaatatgataaaatgatagtttggaggtctcagaaagattgaaagattttatttcaggatatgaaagagacttattaaaggagaagctcagagaatgggataaatgaaattgtgactacagagaagttgccattataagaaa-gacagtgcttga-ctcagtcattcc---ggaaatgtggtctctgtgttagcagcatcagcatcacctgggaacttactagaactgcttattctcaggcttc-acccc-agaactaccaaatctgaaattccaagagtaggactcagcaatctcttgttttaacacaactgt
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             62639 361 +     85812 ggaatttaggcagaagaacagggaa--aagc----acaccaaggaggt-aagggtcactgtgaatatgataaaatgatagtttggaggtctcagaaagattgaaagattttatttcaggatatgaaagagacttattaaaggagaagctcagagaatgggataaatgaaattgtgactacagagaagttgccattataagaaa-gacagtgcttga-ctcagtcattct---ggaaatgtggtctctgtgttagcagcatcagcatcacctgggaacttactagaactgcttattctcaggcttc-acccc-agaactaccaaatctgaaattccaagagtaggactcagcaatctcttgttttaacacaactgt
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                13652 361 +     89302 ggaatttaggcagaagaacagggaa--aagc----ataccaaggaggt-aagggtcactgtgaatatgataaaatgatagtttggaggtctcagaaagattgaaagattttatttcaggatatgaaagagacttattaaaggggaagctcagagaatgggataaatgaaattgtgactacagagaagttgccattataagaaa-gacagtgcttga-ctcagtcattct---ggaaatgtggtctctgtgttagcagcatcagcatcacctgggaacttactagaactgcttattctcaggcttc-acccc-agaactaccaaatctgaaattccaagagtaggactcagcaatctcttgttttaacacaactgt
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             18153 361 -     58268 ggaatttaggcagaagaacagggaa--aagc----acaccaaggaggt-aagggtcactgtgaatatgataaaatgatagtttggaggtctcagaaagattgaaagattttatttcaggatatgaaagagacttattaaaggagaagctcagagaatgggataaatgaaattgtgactacagagaagttgccattataagaaa-gacagtgcttga-ctcagtcattcc---ggaaatgtggtctctgtgttagcagcatcagcatcacctgggaacttactagaactgcttattctcaggcttc-acccc-agaactaccaaatctgaaattccaagagtaggactcagcaatctcttgttttaacacaactgt
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             66147 361 +    119057 ggaatttaggcagaagaacagggaa--aagc----ataccaaggaggt-aagggtcactgtgaatatgataaaatgatagtttggaggtctcagaaagattgaaagattttatttcaggatatgaaagagacttattaaaggagaagctcagagaatgggataaatgaaattgtgactacagagaagttgccattataagaaa-gacagtgcttga-ctcagtcattct---ggaaatgtggtctctgtgttagcagcatcagcatcacctgggaacttactagaactgcttattctcaggcttc-acccc-agaactaccaaatctgaaattccaagagtaggactcagcaatctcttgttttaacacaactgt
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               8116 361 -     25888 ggaatttaggcagaagaacagggaa--aagc----ataccaaggaggt-aagggtcactgtgaatatgataaaatgatagtttggaggtctcagaaagattgaaagattttatttcaggatatgaaagagacttattaaaggagaagctcagagaatgggataaatgaaattgtgactacagagaagttgccattataagaaa-gacagtgcttga-ctcagtcattct---ggaaatgtggtctctgtgttagcagcatcagcatcacctgggaacttactagaactgcttattctcaggcttc-acccc-agaactaccaaatctgaaattccaagagtaggactcagtaatctcttgttttaacacaactgt
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Cacajao_ayresi.k141_724503                               116014 363 -    171031 ggaattcaggcaggagaacaggcaa--aagt----acactgtggaggt-aagagtcactgtgaatatgataaaataatagtttggaggtctcagagagattgaaagattttatttcaggatatgaaagagaatgattaaaggagaagctcagagaatgggatgaatgaaattgtgactacagagaagttgccattataagaaatgacagtgcttca-ctcagtcattct---ggaaatgtggtctctgtgttagcagcatcagcatcacctgggaacttactagaactgcttattctcaggcttc-actcctagaactaccaaatctgaaattccaagagtaggactcagcaatctcttgttttaacacaactat
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 15039 363 +    125063 ggaattcaggcaggagaacaggcaa--aagt----acactgtggaggt-aagggtcactgtgaatatgataaaataatagtttggaggtctcagagagattgaaagattttatttcaggatatgaaagagaatgattaaaggagaagctcagagaatgggatgaatgaaattgtgactacagagaagttgccattataagaaatgacagtgcttca-ctcagtcattct---ggaaatgtggtctctgtgttagcagcatcagcatcacctgggaacttactagaactgcttattctcaggcttc-actcctagaactaccaaatctgaaattccaagagtaggactcagcaatctcttgttttaacacaactat
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                17086 363 -    216513 ggaattcaggcaggagaacaggcaa--aagt----acactgtggaggt-aagagtcactgtgaatatgataaaataatagtttggaggtctcagagagattgaaagattttatttcaggatatgaaagagaatgattaaaggagaagctcagagaatgggatgaatgaaattgtgactacagagaagttgccattataagaaatgacagtgcttca-ctcagtcattct---ggaaatgtggtctctgtgttagcagcatcagcatcacctgggaacttactagaactgcttattctcaggcttc-actcctagaactaccaaatctgaaattccaagagtaggactcagcaatctcttgttttaacacaactat
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        9629 363 -    134917 ggaattcaggcaggagaacaggcaa--aagt----acactgtggaggt-aagagtcactgtgaatatgataaaataatagtttggaggtctcagagagattgaaagattttatttcaggatatgaaagagaatgattaaaggagaagctcagagaatgggatgaatgaaattgtgactacagagaagttgccattataagaaatgacagtgcttca-ctcagtcattct---ggaaatgtggtctctgtgttagcagcatcagcatcacctgggaacttactagaactgcttattctcaggcttc-actcctagaactaccaaatctgaaattccaagagtaggactcagcaatctcttgttttaacacaactat
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Cebus_albifrons.Contig22                               18892851 363 -  29618158 ggaatttaggcaggagaacaggcaa--aatt----acaccaaggaggt-aagggtcactgtgaatataataaaatagtagtttggaggtctcagagagattgaaagattttatttcaagatatgatagagaatgattaaaggagaagctcagagaatgggatgaatgaaactgtgactacagagaagttgccattataagaaatgacagtgcttcg-ctcagtcattct---ggaaatgtggtcactgtgttagcagcatcagcatcacctgggaacttactagaactgcatattctcaggcttc-accccttgaactaccaaatctgaaattccaagagtaggactcagcaatctcttattttaacacaactgt
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                10395 363 -     26817 ggaatttaggcaggagaacaggcaa--aatt----acaccaaggaggt-aagggtcactgtgaatataataaaatagtagtttggaggtctcagagagattgaaagattttatttcaagatatgatagagaatgattaaaggagaagctcagagaatgggatgaatgaaactgtgactacagagaagttgccattataagaaatgacagtgcttcg-ctcagtcattct---ggaaatgtggtcactgtgttagcagcatcagcatcacctgggaacttactagaactgcatattctcaggcttc-accccttgaactaccaaatctgaaattccaagagtaggactcagcaatctcttattttaacacaactgt
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                14638 363 +     25043 ggaatttaggcaggagaacaggcaa--aatt----acaccaaggaggt-aagggtcactgtgaatataataaaatagtagtttggaggtctcagagagattgaaagattttatttcaagatatgatagagaatgattaaaggagaagctcagagaatgggatgaatgaaactgtgactacagagaagttgccattataagaaatgacagtgcttcg-ctcagtcattct---ggaaatgtggtcactgtgttagcagcatcagcatcacctgggaacttactagaactgcatattctcaggcttc-acccctagaactaccaaatctgaaattccaagagtaggactcagcaatctcttattttaacacaactgt
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cercocebus_atys.KQ010443.1                              6557601 338 +   6739814 GGAATTTAGGCAGGAGAACAGGCAAGAGAGT----ACCTCAAGGAGGT-AAGGGTCATTGTGAATATGATAAAATGACAGTTTGGAGGTCTCAGAGAGATTGAAAGATTTTATGTCAGGGTATGAAA-GGAATGATTAAAGGAGGAGCTCAGAGAATGGGATGAATGAAGTTGTGACTACAGAGAAGTTGCTATTATAAGTAATGACGATGCTTCA-CTCAGTCCTTCT---GGAAGTGTGGTCTCTGTgctggcagcatcagcatcacctgggagcttaccAGAACTGCATATTCTCAGGGTAC-ACCCCCAGATCTACCAAACCTGAAATTCTAAGAGCAGGCCTCA--------------------------
i Cercocebus_atys.KQ010443.1                            C 0 I 24
s Cercocebus_chrysogaster.k141_2328246                      29078 338 +     60454 ggaatttaggcaggagaacaggcaagagagt----acctcaaggaggt-aagggtcattgtgaatatgataaaatgacagtttggaggtctcagagagattgaaagattttatgtcagggtatgaaa-ggaatgattaaaggaggagctcagagaatgggatgaatgaagttgtgactacagagaagttgctattataagtaatgacgatgcttca-ctcagtccttct---ggaagtgtggtctctgtgctggcagcatcagcatcacctgggagcttaccagagctgcatattctcaggttac-acccccagatctaccaaacctgaaattctaagagcaggcctca--------------------------
i Cercocebus_chrysogaster.k141_2328246                  C 0 I 24
s Cercocebus_lunulatus.k141_4634644                          4282 338 -     21101 ggaatttaggcaggagaacaggcaagagagt----acctcaaggaggt-aagggtcattgtgaatatgataaaatgacagtttggaggtctcagagagattgaaagattttatgtcagggtatgaaa-ggaatgattaaaggaggagctcagagaatgggatgaatgaagttgtgactacagagaagttgctattataagtaatgacgaTGCTTCA-CTcagtccttct---ggaagtgtggtctctgtgctggcagcatcagcatcacctgggagcttaccagaactgcatattctcagggtac-acccccagatctaccaaacctgaaattctaagagcaggcctca--------------------------
i Cercocebus_lunulatus.k141_4634644                     C 0 I 24
s Cercocebus_torquatus.k141_3969582                         61592 338 -    107033 ggaatttaggcaggagaacaggcaagagagt----acctcaaggaggt-aagggtcattgtgaatatgataaaatgacagtttggaggtctcagagagattgaaagattttatgtcagggtatgaaa-ggaatgattaaaggaggagctcagagaatgggatgaatgaagttgtgactacagagaagttgctattataagtaatgacgatgcttca-ctcagtccttct---ggaagtgtggtctctgtgctggcagcatcagcatcacctgggagcttaccagaactgcatattctcagggtac-acccccagatctaccaaacctgaaattctaagagcaggcctca--------------------------
i Cercocebus_torquatus.k141_3969582                     C 0 I 24
s Cercopithecus_ascanius.k141_4123525                        4474 339 -     17608 ggaatttaggcaggagaacaggcaagacagt----acctcaaggaggt-aagggtcattgtgaatatgataaaataatagtttggaggtctcagagagattgaaagattttatgtcagggtatgaaagggaatgattaaaggaggagctcagagaatgggatgaatgaagttgtgactacagagaagttgctattataagtaatgacgatgcttca-ctcagtccttct---gggagtgtggtctctgtgctggcagcagcagcatcacctgggagcttaccagaactgcatattctcaggttac-acccccagatctaccaaatctgaaatcccaagagcaggcctca--------------------------
i Cercopithecus_ascanius.k141_4123525                   C 0 I 24
s Cercopithecus_cephus.k141_3893260                          1638 339 +     45019 ggaatttaggcaggagaacaggcaagagagt----acctcaaggaggt-aagggtcattgtgaatatgataaaataatagtttcgaggtctcagagagattgaaagattttatgtcagggtatgaaagggaatgattaaaggaggagctcagagaatgggatgaatgaagttgtgactacagagaagttgctattataagtaatgacgatgcttca-ctcagtccttct---gggagtgtggtctctgtgctggcagcagcagcatcacctgggagcttaccagaactgcatattctcaggttac-acccccagatctaccaaatctgaaatcccaagagcaggcctca--------------------------
i Cercopithecus_cephus.k141_3893260                     C 0 I 24
s Cercopithecus_diana.k141_2561715                           1704 339 +     15177 ggaatttaggcaggagaacaggcaagacagt----acctcaaggaggt-aagggtcattgtgaatatgataaaataatagtttggaggtctcagagagattgaaagattttatgtcagggtatgaaagggaatgattaaaggaggagctcagagaatgggatgaatgaagttgtgactacagagaagttgctattataagtaatgacgatgcttca-ctcagtccttct---gggagtgtggtctctgtgctggcagcatcagcatcacctgggagcttaccagaactgcatattctcaggttac-acccccagatctaccaaatctgaaatcccaagagcaggcctca--------------------------
i Cercopithecus_diana.k141_2561715                      C 0 I 24
s Cercopithecus_hamlyni.k141_129805                          4522 339 +     16677 ggaatttaggcaggagaacaggcaagagagt----acctcaaggaggt-aagggtcattgtgaatatgataaaataatagtttcgaggtctcagagagattgaaagattttatgtcagggtatgaaagggaatgattaaaggaggagctcagagaatgggatgaatgaagttgtgagtacagagaagttgctattatacgtaatgacgatgcttca-ctcagtccttcc---ggaagtgtggtctctgtgctggcagcagcagcatcacctgggagcttaccagaactgcatattctcaggttac-acccccagatctaccaaatctgaaattccaagagcaggcctca--------------------------
i Cercopithecus_hamlyni.k141_129805                     C 0 I 24
s Cercopithecus_lowei.k141_623764                           26689 339 +     35983 ggaatttaggcaggagaacaggcaagacagt----acctcaaggaggt-aatggtcattgtgaatatgataaaataataattgggaggtctcagagagattgaaagattttatgtcagggtatgaaagggaatgattaaagcaggagctcagagaatgggatgaatgaagttgtgagtacagagaagttgctattataagtaatgacgatgcttca-ctcagtccttct---gggagtgtggtctctgtgctggcagcagcagcatcacctgggagcttaccagaactgcatattctcaggttac-acccccagatctaccaaatctgaaattccaagagcaggcctca--------------------------
i Cercopithecus_lowei.k141_623764                       C 0 I 24
s Cercopithecus_albogularis.ctg51                              11993220 339 +  12117833 ggaatttaggcaggagaacaggcaagagagt----acctcaaggaggt-aagggtcattgtgaatatgataaaataatagtttcgaggtctcagagagattgaaagattttatgtcagggtatgaaagggaatgattaaaggaggagctcagagaatgggatgaatgaagttgtgactacagagaagttgctattataagtaatgacgatgcttca-ctcagtccttct---gggagtgtggtctctgtgctggcagcatcggcatcgcctgggaacttaccagaactgcatattctcaggctac-acccccagatctaccaaatctgaaatcccaagagcaggcctca--------------------------
i Cercopithecus_albogularis.ctg51                             C 0 I 24
s Cercopithecus_mona.ctg12                               46479978 339 +  46592721 ggaatttaggcaggagaacaggcaagacagt----acctcaaggaggt-aagggtcattgtgaatatgataaaataataatttggaggtctcagagagattgaaagattttatgtcagggtatgaaagggaatgattaaagcaggagctcagagaatgggatgaatgaagttgtgagtacagagaagttgctattacaagtaatgacgatgcttca-ctcagtccttct---gggagtgtggtctctgtgctggcagcagcagcatcacctgggagcttaccagaactgcatattctcaggttac-acccccagatctaccaaatctgaaattccaacagcaggcctca--------------------------
i Cercopithecus_mona.ctg12                              C 0 I 24
s Cercopithecus_neglectus.k141_2078027                      43532 363 -     45581 ggaatttaggcagcagaacaggcaagacagt----acctcaaggaggt-aagggtcattgtgaatatgataaaataataatttggaggtctcagagagattgaaagattttatgtcagggtatgaaagggaatgattaaagcaggagctcagagaatgggatgaatgaagttgtgactacagagaagttgctattataagtaatgacgatgcttca-ctcagtccttct---gggagtgtggtctctgtgctggcagcagcagcatcacctgggagcttaccagaactgcatattctcaggttac-acccccagatctaccaaatctgaaattccaagagcaggcctcagcaatctc--attttaacacaactgt
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       4534 339 +     35577 ggaatttaggcaggagaacaggcaagagagt----acctcaaggaggt-aagggtcattgtgaatatgataaaataatagtttcgaggtctcagagagattgaaagattttatgtcagggtatgaaagggaatgattaaaggaggagctcagagaatgggatgaatgaagttgtgactacagagaagttgctattataagtaatgacgatgcttca-ctcagtccttct---gggagtgtggtctctgtgctggcagcagcagcatcacctgggagcttaccagaactgcatattctcaggttac-acccccagatctaccaaatctgaaatcccaagagcaggcctca--------------------------
i Cercopithecus_nictitans.k141_1129315                  C 0 I 24
s Cercopithecus_petaurista.k141_64532                        4307 339 -     25661 ggaatttaggcaggagaacgggcaagacagt----acctcaaggaggt-aagggtcattgtgaatatgataaaataatagtttggaggtctcagagagattgaaagattttatgtcagggtatgaaagggaatgattaaaggaggagctcagagaatgggatgaatgaagttgtgactacagagaagttgctattataagtaatgacgaTGCTTCA-CTcagtccttct---gggagtgtggtctctgtgctggcagcagcagcatcacctgggagcttaccagaactgcatattctcaggttac-acccccagatctaccaaatctgaaatcccaagagcaggcctca--------------------------
i Cercopithecus_petaurista.k141_64532                   C 0 I 24
s Cercopithecus_pogonias.k141_3109732                        4286 339 -     17744 ggaatttaggcaggagaacaggcaagacagt----acctcaaggaggt-aatggtcattgtgaatatgataaaataataatttggaggtctcagagagattgaaagattttatgtcagggtatgaaagggaatgattaaagcaggagctcagagaatgggatgaatgaagttgtgactacagagaagttgctattacaagtaatgacgatgcttca-ctcagtccttct---gggagtgtggtctctgtgctggcagcatcagcatcacctgggagcttaccacaactgcatattctcaggttac-acccccagatctaccaaatctgaaatcccaagagcaggcctca--------------------------
i Cercopithecus_pogonias.k141_3109732                   C 0 I 24
s Cercopithecus_roloway.k141_2263608                        23870 339 +     37128 ggaatttaggcaggagaacaggcaagacagt----acctcaaggaggt-aagggtcattgtgaatatgataaaataatagtttggaggtctcagagagattgaaagattttatgtcagggtatgaaagggaatgattaaaggaggagctcagagaatgggatgaatgaagttgtgactacagagaagttgctattataagtaatgacgatgcttca-ctcagtccttct---gggagtgtggtctctgtgctggcagcatcagcatcacctgggagcttaccagaactgcatattctcaggttac-acccccagatctaccaaatctgaaatcccaagagcaggcctca--------------------------
i Cercopithecus_roloway.k141_2263608                    C 0 I 24
s Cheracebus_lucifer.k141_619653                             7672 363 -     18223 ggaatttaggcaggagaacaggcaa--aggt----acaccatggaggt-aagggccactgtgaatatgataaaataacagtttggaggtctcagagagattgaaagattttatttcaggatatgaaagagaatgattaaaagagaagatcagagaatgggatgaatgaaattgtgactacatagaagttgccattataagaaatggcaGTGCTTCA-CTcaatcattct---ggaaatgtggtctctgtgttagcagcaacagcatcacctgggaacttactagaactgcttattctcaggcttc-acgcttggaactaccaaatctgaaattccaagagtaggactcagcaatctcttgttttaacacaactgt
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             24690 363 +     25473 ggaatttaggcaggagaacaggcaa--aggt----acaccatggaggt-aagggtcactgtgaatatgataaaataacagtttggaggtctcagagagattgaaagattttatttcaggatatgaaagagaatgattaaaagagaagatcagagaatgggatgaatgaaattgtgactacatagaagttgccattataagaaatggcaGTGCTTCA-CTcaatcattct---ggaaatgtggtctctgtgttagcagcaacagcatcacctgggaacttactagaactgcttattctcaggcttc-acgcttggaactaccaaatctgaaattccaagagtaggactcagcaatctcttgttttaacacaactgt
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           43730 363 +     57117 ggaatttaggcaggagaacaggcaa--aggt----acaccatggaggt-aagggccactgtgaatatgataaaataacagtttggagatctcagagagattgaaagattttatttcaggatatgaaagagaatgattaaaagagaagatcagagaatgggatgaatgaaattgtgactacatagaacttgccattataagaaatgtcaGTGCTTCA-CTcaatcattct---ggaaatgtggtctctgtgttagcagcaacagcatcacctgggaacttactagaactgcttattctcaggcttc-acgcttggaactaccaaatctgaaattccaagagtaggactcagcaatctcttgttttaacacaactgt
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          48409 363 +     54541 ggaatttaggcaggagaacaggcaa--aggt----acaccatggaggt-aagggccactgtgaatatgataaaataacagtttggaggtctcagagagattgaaagattttatttcaggatatgaaagagaatgattaaaagagaagatcagagaatgggatgaatgaaattgtgactacatagaagttgccattataagaaatggcaGTGCTTCA-CTcaatcattct---ggaaatgtggtctctgtgttagcagcaacagcatcacctgggaacttactagaactgcttattctcaggcttc-acgcttggaactaccaaatctgaaattccaagagtaggactcagcaatctcttgttttaacacaactgt
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chiropotes_israelita.k141_1189915                         73210 363 +    196370 ggaattcaggcaggagaacaggcaa--aagt----acaccgtggaggt-aagggtcactgtgaatatgataaaataatagtttggaggtctcagagagattgaaagattttatttcaggatatgaaagagaatgattaaaggagaagctcagagaatgggatgaatgaaattgtgactacagagaagttgccattataagaaatgacagtgcttca-ctcagtcattct---ggaaatgtggtctctgtgttagcagcatcagcatcacctgggaacttactagaactgcttattctcaggcttc-actcctagaactaccaaatctgaaattccaagagtaggacttagcaatctcttgttttaacacaactat
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          17391 363 +     40510 ggaattcaggcaggagaacaggcaa--aagt----acaccgtggaggt-aagggtcactgtgaatatgataaaataatagtttggaggtctcagagagattgaaagattttatttcaggatatgaaagagaatgattaaaggagaagctcagagaatgggatgaatgaaattgtgactacagagaagttgccattataagaaatgacagtgcttca-ctcagtcattct---ggaaatgtggtctctgtgttagcagcatcagcatcacctgggaacttactagaactgcttattctcaggcttc-actcctagaactaccaaatctgaaattccaagagtaggacttagcaatctcttcttttaacacaactat
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15141889 339 -  15256731 ggaatttaggcaggagaacaggcaagagagt----acctcaaggaggt-aagggtcattgtgaatatgataaaataatagtttggaggtctcagagagattgaaagattttatgtcagggtatgaaagggaatgattaaaggaggagctcagagaacgggatgaatgaagttgtgactacagagaagttgctattataagtaatgacgaTGCTTCA-CTcagtccttct---ggaagtgtggtctctgtgttggcagcatcagcaccacctgggagcttaccagaactgcatattctcaggttac-acccccagatctaccaaatctgaaattctaagagcaggcctca--------------------------
i Chlorocebus_aethiops.ctg22                            C 0 I 24
s Chlorocebus_pygerythrus.k141_1486215                      36498 339 -     53260 ggaatttaggcaggagaacaggcaagagagt----acctcaaggaggt-aagggtcattgtgaatatgataaaataatagtttggaggtctcagagagattgaaagattttatgtcagggtatgaaagggaatgattaaaggaggagctcagagaacgggatgaatgaagttgtgactacagagaagttgctattataagtaatgacgaTGCTTCA-CTcagtccttct---ggaagtgtggtctctgtgttggcagcatcagcaccacctgggagcttaccagaactgcatattctcaggttac-acccccagatctaccaaatctgaaattctaagagcaggcctca--------------------------
i Chlorocebus_pygerythrus.k141_1486215                  C 0 I 24
s Chlorocebus_sabaeus.CM001963.2                        101147057 339 + 101219884 GGAATTTAGGCAGGAGAACAGGCAAGAGAGT----ACCTCAAGGAGGT-AAGGGTCATTGtgaatatgataaaataatagtTTGGAGGTCTCAGAGAGATGGAAAGATTTTATGTCAGGGTATGAAAGGGAATGATTAAAGGAGGAGCTCAGAGAACGGGATGAATGAAGTTGTGACTACAGAGAAGTTGCTATTATAAGTAATGACGATGCTTCA-CTCAGTCCTTCT---GGAAGTGTGGTCTCTGTGTTGgcagcatcagcaccacctgGGAGCTTACCAGAACTGCATATTCTCAGGTTAC-ACCCCCAGATCTACCAAATCTGAAATTCTAAGAGCAGGCCTCA--------------------------
i Chlorocebus_sabaeus.CM001963.2                        C 0 I 24
s Colobus_angolensis.KN985967.1                          10889040 361 +  10971483 GGAATTTAGGCAGGAGAACAGGCAAGAGAGT----ACCTCAAGGAGGT-AAGGATCATTGtgaatatgataaaataatagtTTGGAGGTCTCAGAGAGACTGAAAGATTTTATGTCAGGGTATGAAAGGGAATGATTAAAGGAGGAGCTCAGAGAATGGGATGAATGAAGCTGTGACT--AGAGAAGTTGCTATTGTAAGTAATGACGATGCTTCA-CTCAGTCAttct---ggaagtctggtctctgtgctggcagcatcagcgtcacctgggaacttaccagaactgcatattctcaggttac-accccCAGATCTACCAAATCTGAAATTCTAAGAGCAGGCCTCAGCAATCTC--ATTTTAACACAACTGT
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147666968 361 + 156195979 ggaatttaggcaggagaacaggcaagagagt----acctcaaggaggt-aaggatcattgtgaatatgataaaataatagtttggaggtctcagagagactgaaagattttatgtcagggtatgaaagggaatgattaaaggaggagctcagagaatgggatgaatgaagctgtgact--agagaagttgctattgtaagtaatgacgaTGCTTCA-CTcagtcgttct---ggaagtctggtctctgtgctggcagcatcagcatcacctgggaacttaccagaactgcatattctcaggttac-acccccagatctaccaaatctgaaattctaagagcaggcctcagcaatctc--attttaacacaactgt
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            18952 361 +     23629 ggaatttaggcaggagaacaggcaagagagt----acctcaaggaggt-aaggatcattgtgaatatgataaaataatagtttggaggtctcagagagactgaaagattttatgtcagggtatgaaagggaatgattaaaggaggagctcagagaatgggatgaatgaagctgtgact--agagaagttgctattgtaagtaatgacgaTGCTTCA-CTcagtccttct---ggaagtgtgttctctgtgctggcagcatcagcatcacctgggaacttaccagaactgcatattctcaggttac-acccccagatctaccaaatctgaaattctaagagcaggcctcagcaatctc--attttaacacaactgt
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Erythrocebus_patas.Contig8                             48779068 339 -  48907691 ggaatttaggcaggagaacaggcaagagagt----acctcaaggaggt-aaaggtcattgtgaatatgataaaataatagtttggaggtctcagagagattgaaagattttatgtcagggtatgaaagggaatgattaaaggaggagctcagagaatgggatgaatgaagttgtgactacagagaagttgctattataagtaatgaggatgcttca-ctcagtccttct---ggaagtgtggtctctgtgctggcagcatcagcatcacctgggagcttaccagaactgcatattctcaggttac-acccccagatctaccaaatctgaaattctaagagcaggcctca--------------------------
i Erythrocebus_patas.Contig8                            C 0 I 24
s Gorilla_beringei.k141_111300                               7648 365 -     14630 ggaatttaggcaggagaacaggcaacagagt----acatcaaggaggt-aagggtcattgtgaatatgataaaataatagtttggaggtctcagagagattgaaagattttatgtcagggtatgaatgggaatgattaaaggaggagctcagagaatgggataaatgaaattgtgactacagagaagttgctgttataagtaatgacgatgcttca-ctcagtccttct---ggaagtgtggtccctgtgctagcagcatcagcatcacctgggaacttactagaactgcatattctcaggttac-acccccagatctaccaaatctggaattccaatagcaggcctcagcaatctcttattttaacacaactgt
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119654748 365 - 195582420 ggaatttaggcaggagaacaggcaacagagt----acatcaaggaggt-aagggtcattgtgaatatgataaaataatagtttggaggtctcagagagattgaaagattttatgtcagggtatgaatgggaatgattaaaggaggagctcagagaatgggataaatgaaattgtgactacagagaagttgctgttataagtaatgacgaTGCTTCA-CTcagtccttct---ggaagtgtggtccctgtgctagcagcatcagcatcacctgggaacttactagaactgcatattctcaggttac-acccccagatctaccaaatctgaaattccaatagcaggcctcagcaatctcttattttaacacaactgt
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Hoolock_leuconedys.ctg1393                                    1745 367 +     16319 ggaatttaggcaggagaacaggcaatagagtac--acatcaaggaggt-aagggtcattgtgaatatgataaaataatagtttggaggtctcagagagattgaaaaattttatgtcagtatatgaaagggaatgattaaaggaggagctcagagaatgggatgaatgaaattgtgactacagagaagttgctattataagtaatgacaatgcttca-ctcagtccttct---ggaagtgtggtccctgtgctagcagcatcagcatcacctgggaacttactagaactgcaaattctcaggttac-acccccagatctaccaaatctgaaattccaatagcaggtctcagcaatctcttattttaacacaactgt
i Hoolock_leuconedys.ctg1393                               C 0 I 291
s Hylobates_abbotti.k141_1816750                              170 367 +      3202 ggaatttgggcaggagaacaggcaatagagtacaca--tcaaggcggt-aagggtcattgtgaatatgataaaataatagtttggaggtctcagagagattgaaaaattttatgtcagtatatgaaagggaatgattaaaggaggagctcagagaatgggatgaatgaaattgtgactacagagatgttgctattataagtaatgacaatgcttca-ctcagtccttct---ggaagtgtggtccctgtgctagcagcatcagcatcacctgggaacttactagaactgcaaattctcaggttac-acccccagatctaccaaatctgaaattccaatagcaggtctcagcaatctcttattttaacacaactgt
i Hylobates_abbotti.k141_1816750                        N 0 C 0
s Hylobates_agilis.k141_1633646                               142 365 -      2102 ggaatttgggcaggagaacaggcaatagagtac--a--tcaaggaggt-aagggtcattgtgaatatgataaaataatagtttggaggtctcagagagattgaaaaattttatgtcagtatatgaaagggaatggttaaaggaggagctcagagaatgggatgaatgaaattgtgactacagagaagttgctattataagtaatgataaTGCTTCA-CTcagttcttct---ggaagtgtggtccctgtgctagcagcatcagcatcacctgggaacttactagaactgcaaattctcaggttac-acccccagatctaccaaatctgaaattccaatagcaggtctcagcaatctcttattttaacacaattgt
i Hylobates_agilis.k141_1633646                         N 0 C 0
s Hylobates_klossii.k141_468230                              1658 365 +      5464 ggaatttgggcaggagaacaggcaatagagtac--a--tcaaggaggt-aaaggtcattgtgaatatgataaaataatagtttggaggtctcagagagattgaaaaattttatgtcagtatatgaaagggaatggttaaaggaggagctcagagaatgggatgaatgaaattgtgactacagagatgttgctattataagtaatgacaatgcttca-ctcagtccttct---ggaagtgtggtctctgtgctagcagcatcagcatcacctgggaacttactagaactgcaaattctcaggttac-acccccagatctaccaaatctgaaattccaatagcaggtctcagcaatctcttattttaacacaactgt
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14627007 365 -  25970782 ggaatttaggcaggagaacaggcaatagagtac--a--tcaaggaggt-aagggtcattgtgaatatgataaaataatagtttggaggtctcagagagattgaaaaattttatgtcagtatatgaaagggaatgattaaaggaggagctcagagaatgggatgaatgaaattgtgactacagagaagttgctattataagtaatgacaatgcttca-ctcagtccttct---ggaagtgtggtccctgtgctagcagcatcagcatcacctgggaacttactagaactgcaaattctcaggttac-acccccagatctaccaaatctgaaattccaatagcaggtctcagcaatctcttattttaacacaactgt
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_950183                             1703 324 +      2027 ggaatttaggcaggagaacaggcaatagagtacaca--tcaaggaggt-aagggtcattctgaatatgataaaataatagtttggaggtctcagagagattgaaaaattttatgtcagtatatgaaagggaatgattgaaggaggagctcagagaatgggatgaatgaaattgtgactacagagaagttgctattataagtaatgacaaTGCTTCA-CTcagtccttct---ggaagtgtggtccctgtgctagcagcatcagcatcacctgggaacttactagaactgcaaattctcaggttac-acccccagatctaccaaatctgaaaT-------------------------------------------
i Hylobates_muelleri.k141_950183                        C 0 N 0
s Lagothrix_lagothricha.k141_12968                          52237 363 -    147782 ggaatttaggcagaagaacagggaa--aagc----acaccaaggaggt-aagggtcactgtgaatatgataaaatgatagtttggaggtttcagaaagattgaaagattttatttcaggatatgaaagagaatgattaaaggagaagctcagagaatgggataaatgaaattgtgactacagagaagttgccattataagaaatgacagtgcttga-ctcagtcattct---ggaaatgtggtcgctgtgttagcagcatcagcatcacctgggaacttactagaactgcttattctcaggcttc-acccctagaactaccaaatctgaaattccaagagtaggactcagcaatctgttgttttaacacaactgt
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lophocebus_aterrimus.ctg55                             19250688 339 +  19376315 ggaatttaggcaggagaacaggcaagagagt----acctcaaggaggt-aagggtcattgtgaatatgataaaatgatagtttggaggtctcagagagattgaaagattttatgtcagggtatgaaagggaatgattaaaggaggagctcagagaatgggatgaatgaagttgtgactacagagaagttgctattataagtaatgacgatgcttca-ctcagtccttct---ggaagtgtggtctctgtgctggcagcatcagcaccacccgggaacttagcagaactgcatattctcaggttac-acccccagatctaccaaacctgaaattccaagagcaggcctca--------------------------
i Lophocebus_aterrimus.ctg55                            C 0 I 24
s Macaca_arctoides.k141_2201161                             22439 339 +     74745 ggaatttaggcaggagaacaggcaagagagt----acctcaaggaggt-aagggtcattgtgaatatgataaaataatagtttggaggtctcagagagattgaaagattttatgtcagggtatgaaagggaatgattaaaggaggagctcagagaatgggatgaatgaagttgtgactacagagaagttgctattgtaagtaatgacgaTGCTTCA-CTcagtccttct---ggaagtgtggtctctgtgctggcagcatcagcatcacctgggaacttaccagaactgcatattctcaggttac-acccccagatctaccaaacctgaaattctaagagcaggcctca--------------------------
i Macaca_arctoides.k141_2201161                         C 0 I 24
s Macaca_assamensis.Contig65                             12708900 339 +  12821369 ggaatttaggcaggagaacaggcaagagagt----acctcaaggaggt-aagggtcattgtgaatatgataaaataatagtttggaggtctcagagagattgaaagattttatgtcagggtatgaaagggaatgattaaaggaggagctcagagaatgggatgaatgaagttgtgactacagagaagttgctattgtaagtaatgacgaTGCTTCA-CTcagtccttct---ggaagtgtggtctctgtgctggcagcatcagcatcacctgggaacttaccagaactgcatattctcaggttac-acccccagatctaccaaacctgaaattctaagagcaggcctca--------------------------
i Macaca_assamensis.Contig65                            C 0 I 24
s Macaca_cyclopis.k119_883699                                1478 335 -     26467 ggaatttaggcaggagaacaggcaagagagt----atctcaaggaggt-aagggtcattgtgaatatgataaaataatagtttggaggtctcagagagattgaaagattttatgtcagggtatgaaagggaatgattaaaggaggagctcagagaatggg----atgaagttgtgactacagagaagttgctattgtaagtaatgacgaTGCTTCA-CTcagtccttct---ggaaatgtggtctctgtgctggcagcatcagcatcacctgggaacttaccagaactgcatattctcaggttac-acccccagatctaccaaacctgaaattctaagagcaggcctca--------------------------
i Macaca_cyclopis.k119_883699                           C 0 I 24
s Macaca_fascicularis.k141_155037                           49345 339 +     63263 ggaatttaggcaggagaacaggcaagagagt----acctcaaggaggt-aagggtcattgtgaatatgataaaataatagtttggaggtctcagagagattgaaagattttatgtcagggtatgaaagggaatgattaaaggaggagctcagagaatgggatgaatgaagttgtgactacagagaagttgctattgtaagtaatgacgaTGCTTCA-CTcagtccttct---ggaagtgtggtctctgtgctggcagcatcagcatcacctgggaacttaccagaactgcatattctcaggttac-acccccagatctaccaaacctgaaattctaagagcaggcctca--------------------------
i Macaca_fascicularis.k141_155037                       C 0 I 24
s Macaca_fuscata.k119_938422                                 1455 339 -     26361 ggaatttaggcaggagaacaggcaagagagt----acctcaaggaggt-aagggtcattgtgaatatgataaaataatagtttggaggtctcagagagattgaaagattttatgtgagggtatgaaagggaatgattaaaggaggagctcagagaatgggatgaatgaagttgtgactacagagaagttgctattgtaagtaatgacgaTGCTTCA-CTcagtccttct---ggaagtgtggtctctgtgctggcagcatcagcatcacctgggaacttaccagaactgcatattctcaggttac-acccccagatctaccaaacctgaaattctaagagcaggcctca--------------------------
i Macaca_fuscata.k119_938422                            C 0 I 24
s Macaca_leonina.k141_467472                                 4632 339 -      7381 ggaatttaggcaggagaacaggcaagagagt----acctcaaggaggt-aagggtcattgtgaatatgataaaataatagtttggaggtctcagagagattgaaagattttatgtcagggtatgaaagggaatgattaaaggaggagctcagagaatgggatgaatgaagttgtgactacagagaagttgctattgtaagtaatgacgaTGCTTCA-CTcagtccttct---ggaagtgtggtctctgtgctggcagcatcagcatcacctgggaacttaccagaactgcatattctcaggttac-acccccagatctaccaaacctgaaattctaagagcaggcctca--------------------------
i Macaca_leonina.k141_467472                            C 0 I 24
s Macaca_maura.k141_251854                                  47870 339 -     79256 ggaatttaggcaggagaacaggcaagagagt----acctcaaggaggt-aagggtcattgtgaatatgataaaataatagtttggaggtctcagagagattgaaagattttatgtcagggtatgaaagggaatgattaaaggaggagctcagagaatgggatgaatgaagttgtgactacagagaagttgctattgtaagtaatgacgaTGCTTCA-CTcagtccttct---ggaagtgtggtctctgtgctggcagcatcagcatcacctgggaacttaccagaactgcatattctcaggttat-acccccagatctaccaaacctgaaattctaagagcaggcctca--------------------------
i Macaca_maura.k141_251854                              C 0 I 24
s Macaca_mulatta.NC_041755.1                            196037972 339 + 196197964 GGAATTTAGGCAGGAGAACAGGCAAGAGAGT----ATCTCAAGGAGGT-AAGGGTCATTGtgaatatgataaaataatagtTTGGAGGTCTCAGAGAGATTGAAAGATTTTATGTCAGGGTATGAAAGGGAATGATTAAAGGAGGAGCTCAGAGAATGGGATGAATGAAGTTGTGACTACAGAGAAGTTGCTATTGTAAGTAATGACGATGCTTCA-CTCAGTCCTTCT---GGAAATGTGGTCTCTGTgctggcagcatcagcatcacctgggaacttaccAGAACTGCATATTCTCAGGTTAC-ACCCCCAGATCTACCAAACCTGAAATTCTAAGAGCAGGCCTCA--------------------------
i Macaca_mulatta.NC_041755.1                            C 0 I 24
s Macaca_nemestrina.KQ004885.1                           11448138 339 +  11645122 GGAATTTAGGCAGGAGAACAGGCAAGAGAGT----ACCTCAAGGAGGT-AAGGGTCATTgtgaatatgataaaataatagtTTGGAGGTCTCAGAGAGATTGAAAGATTTTATGTCAGGGTATGAAAGGGAATGATTAAAGGAGGAGCTCAGAGAATGGGATGAATGAAGTTGTGACTACAGAGAAGTTGCTATTGTAAGTAATGACGATGCTTCA-CTCAGTCCTTCT---GGAAGTGTGGTCTCTGTgctggcagcatcagcatcacctgggaacttaccAGAACTGCATATTCTCAGGTTAC-ACCCCCAGATCTACCAAACCTGAAATTCTAAGAGCAGGCCTCA--------------------------
i Macaca_nemestrina.KQ004885.1                          C 0 I 24
s Macaca_nigra.k141_282495                                   6824 339 -     46448 ggaatttaggcaggagaacacgcaagagagt----acctcaaggaggt-aagggtcattgtgaatatgataaaataatagtttggaggtctcagagagattgaaagattttatgtcagggtatgaaagggaatgattaaaggaggagctcagagaatgggatgaatgaagttgtgactacagagaagttgctattgtaagtaatgacgaTGCTTCA-CTcagtccttct---ggaagtgtggtctctgtgctggcagcatcagcatcacctgggaacttaccagaactgcatattctcaggttac-acccccagatctaccaaacctgaaattctaagagcaggcctca--------------------------
i Macaca_nigra.k141_282495                              C 0 I 24
s Macaca_radiata.k141_3680256                                4490 339 -     13212 ggaatttaggcaggagaacaggcaagagagt----acctcaaggaggt-aagggtcattgtgaatatgataaaataatagtttggaggtctcagagagattgaaagattttatgtcagggtatgaaagggaatgattaaaggaggagctcagagaatgggatgaatgaagttgtgactacagagaagttgctattgtaagtaatgacgaTGCTTCA-CTcagtccttct---ggaagtgtggtctctgtgctggcagcatcagcatcacctgggaacttaccagaactgcatattctcaggttac-acccccagatctaccaaacctgaaattctaagagcaggcctca--------------------------
i Macaca_radiata.k141_3680256                           C 0 I 24
s Macaca_siberu.k141_741907                                 18167 339 -     55006 ggaatttaggcaggagaacaggcaagagagt----acctcaaggaggt-aagggtcattgtgaatatgataaaataatagtttggaggtctcagagagattgaaagattttatgtcagggtatgaaagggaatgattaaaggaggagctcagagaatgggatgaatgaagttgtgactacagagaagttgctattgtaagtaatgacgaTGCTTCA-CTcagtccttct---ggaagtgtggtctctgtgctggcagcatcagcatcacctgggaacttaccagaactgcatattctcaggttac-acccccagatctaccaaacctgaaattctaagagcaggcctca--------------------------
i Macaca_siberu.k141_741907                             C 0 I 24
s Macaca_silenus.Contig12                                43843273 339 +  43892939 ggaatttaggcaggagaacaggcaagagagt----acctcaaggaggt-aagggtcattgtgaatatgataaaataatagtttggaggtctcagagagattgaaagattttatgtcagggtatgaaagggaatgattaaaggaggagctcagagaatgggatgaatgaagttgtgactacagagaagttgctattgtaagtaatgacgaTGCTTCA-CTcagtccttct---ggaagtgtggtctctgtgctggcagcatcagcatcacctgggaacttaccagaactgcatattctcaggttac-acccccagatctaccaaacctgaaattctaagagcaggcctca--------------------------
i Macaca_silenus.Contig12                               C 0 I 24
s Macaca_thibetana.k99_662710                               19454 339 -     24607 ggaatttaggcaggagaacaggcaagagagt----acctcaaggaggt-aagggtcattgtgaatatgataaaataatagtttggaggtctcagagagattgaaagattttatgtcagggtatgaaagggaatgattaaaggaggagctcagagaatgggatgaatgaagttgtgactacagagaagttgctattgtaagtaatgacgaTGCTTCA-CTcagtccttct---ggaagtgtggtctctgtgctggcagcatcagcatcacctgggaacttaccagaattgcatattctcaggttac-acccccagatctaccaaacctgaaattctaagagcaggcctca--------------------------
i Macaca_thibetana.k99_662710                           C 0 I 24
s Macaca_tonkeana.k141_2870633                               6821 339 -     27140 ggaatttaggcaggagaacaggcaagagagt----acctcaaggaggt-aagggtcattgtgaatatgataaaataatagtttggaggtctcagagagattgaaagattttatgtcagggtatgaaagggaatgattaaaagaggagctcagagaatgggatgaatgaagttgtgactacagagaagttgctattgtaagtaatgacgaTGCTTCA-CTcagtccttct---ggaagtgtggtctctgtgctggcagcatcagcatcacctgggaacttaccagaactgcatattctcaggttat-acccccagatctaccaaacctgaaattctaagagcaggcctca--------------------------
i Macaca_tonkeana.k141_2870633                          C 0 I 24
s Mandrillus_leucophaeus.scaffold125                     43439853 339 -  43563597 ggaatttaggcaggagaacaggcaagagagt----acctcaaggaggt-aagggtcattgtgaatatgataaaatgatagtttggaggtctcagagagattgaaagattttatgtcagggtatgaaagggaatgattaaaggaggagcacagagaatgggatgaatgaagttgtgactacagagaagttgctattataagtaatgacgatgcttca-ctcagtccttct---ggaagtgtggtctctgtgctggcagcatcagcatcacctgggaacttaccagaactgcatattctcaggttac-acccccagatctaccaaacctgaaattctaagagcaggcctca--------------------------
i Mandrillus_leucophaeus.scaffold125                    C 0 I 24
s Mandrillus_sphinx.Contig144                             4452667 340 -   4543643 ggaatttaggcaggagaacaggcaagagagt----acctcaaggaggt-aagggtcattgtgaatatgataaaatgatagtttggaggtctcagagagattgaaagattttatgtcagggtatgaaagggaatgattaaaggaggagcacagagaatgggatgaatgaagttgtgactacagagaagttgctattataagtaatgacgaTGCTTCAACTcagtccttct---ggaagtgtggtctctgtgctggcagcatcagcatcacctgggaacttaccagaactgcatattctcaggttac-accccctgatctaccaaacctgaaattctaagagcaggcctca--------------------------
i Mandrillus_sphinx.Contig144                           C 0 I 24
s Miopithecus_ogouensis.k141_2935907                         4419 327 +     29742 gga------------gaacaggcaagagagt----acctcgaggaggt-aagggtcattgtgaatatgataaaataatagtttggaggtctcagagagattgaaagattttatgtcagggtatgaaagggaatgattaaaggaggagctcaaagaatgggatgaatgaagttgtgactacagagaagttgctattataagtaatgacgatgcttcc-ctcagtccttct---ggaagtgtggtctctgtgctggcagcatcagcatcacctgggggcttaccagaactgcatattctcaggttac-acccccagatctaccaaatctgaaattccaagagcaggcctca--------------------------
i Miopithecus_ogouensis.k141_2935907                    C 0 I 24
s Nasalis_larvatus.k141_153429                              10879 363 +     48152 ggaatttaggcaggagaacaggcaagagagc----acctcaaggaggt-aagggtcattgtgaatatgataaaataatagtttggaggtctcagagagactgaaagattttatgtcagggtatgaaagggaatgattaaaggaggagctcagagaatgggatgaatgaagttgtgactacagagaagttgctattgtaagtaatgacgaTGCTTCA-CTcagtccttct---ggaagtgtggtctctgtgctggcagcatcagcatcacctgggaacttaccagaactgcatattctcaggttac-acccccagatctaccaaatctgaaattctaagagcaggcctcaggaatctc--attttaacacaactgt
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Nomascus_annamensis.k141_224620                            1473 365 -      2316 ggaatttaggcaggagaacaggcaatagagt----acatcaaggaggt-aaaggtcattgtgaatatgataaaataatagtttggaggtctcagagagattgaaaaattttatgtcagtatatgaaagggaatgattaaaggaggagctcagagaatgggatgaatgaaattgtgactacagagaagttgctattataagtaatgacaatgcttca-ctcagtccttct---ggaagtgtggtccctgtgctagcagcatcagcatcacctgggaacttactagaactgcaaattctcaggttac-acccccagatctaccaaatctgaaattccaatagcaggtctcagcaatctcttattttaacacaactgt
i Nomascus_annamensis.k141_224620                       C 0 C 0
s Nomascus_concolor.k141_226614                              3570 365 -      5092 ggaatttaggcaggagaacaggcaatagagt----acatcaaggaggt-aaaggtcattgtgaatatgataaaataatagtttggaggtctcagagagattgaaaaattttatgtcagtatatgaaagggaatgattaaaggaggagctcagagaatgggatgaatgaaattgtgactacagagaagttgctattataagtaatgacaatgcttca-ctcagtccttct---ggaagtgtggtccctgtgctagcagcatcagcatcacctgggaacttactagaactgcaaattctcaggttac-acccccagatctaccaaatctgaaattccaatagcaggtctcagcaatctcttattttaacacaactgt
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_1032971                           1140 365 -      1918 ggaatttaggcaggagaacaggcaatagagt----acatcaaggaggt-aaaggtcattgtgaatatgataaaataatagtttggaggtctcagagagattgaaaaattttatgtcagtatatgaaagggaatgattaaaggaggagctcagagaatgggatgaatgaaattgtgactacagagaagttgctattataagtaatgacaatgcttca-ctcagtccttct---ggaagtgtggtccctgtgctagcagcatcagcatcacctgggaacttactagaactgcaaattctcaggttac-acccccagatctaccaaatctgaaattccaatagcaggtctcagcaatctcttattttaacacaactgt
i Nomascus_gabriellae.k141_1032971                      C 0 C 0
s Nomascus_siki_b.tarseq_2374                             916 366 +      8673 ggaatttaggcaggagaacaggcaatagagt----acatcaaggaggtaaagggtcattgtgaatatgataaaataatagtttggaggtctcagagagattgaaaaattttatgtcagtatatgaaagggaatgattaaaggaggagctcagagaatgggatgaatgaaattgtgactacagagaagttgctattataagtaatgacaatgcttca-ctcagtccttct---ggaagtgtggtccctgtgctagcagcatcagcatcacctgggaacttactagaactgcaaattctcaggttac-acccccagatctaccaaatctgaaattccaatagcaggtctcagcaatctcttattttaacacaactgt
i Nomascus_siki_b.tarseq_2374                       n 365 I 541
s Nomascus_siki_a.k141_1035055                                 1883 365 -      3602 ggaatttaggcaggagaacaggcaatagagt----acatcagggaggt-aagggtcattgtgaatatgataaaataatagtttggaggtctcagagagattgaaaaattttatgtcagtatatgaaagggaatgattaaaggaggagctcagagaatgggatgaatgaaattgtgactacagagaagttgctattataagtaatgacaatgcttca-ctcagtccttct---ggaagtgtggtccctgtgctagcagcatcagcatcacctgggaacttactagaactgcaaattctcaggttac-acccccagatctaccaaatctgaaattccaatagcaggtctcagcaatctcttattttaacacaactgt
i Nomascus_siki_a.k141_1035055                            C 0 C 0
s Pan_paniscus.CM003386.1                               127577010 365 - 205426864 GGAATTTAGGCAGGAGAACAGGCAACAGAGT----ACATCAAGGAGGT-AAGGGTCATTGtgaatatgataaaataatagtTTGGAGGTCTCAGAGAGATTGAAAGATTTTATGTCAGGGTATGAATGGGAATGATTATAGGAGGAGCACAGAGAATGGGATAAATGAAATTGTGACTAGAGAGAAGTTGCTGTTCTAAGTAATGACGATGTTTCA-CTCAGTCCTTCT---GGAAGTGTGGTCCCTGTgctagcagcatcagcatcacctgggaacttactAGAACTGCATATTCTCAGGTTAC-ACCCCCAGATCTACCAAATCTGAAATTCCAATAGCAGGCCTCAGCAATCTCTTATTTTAACACAACTGT
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120154170 365 - 196562556 GGAATTTAGGCAGGAGAACAGGCAACAGAGT----ACATCAAGGAGGT-AAGGGTCATTGtgaatatgataaaataatagtTTGGAGGTCTCAGAGAGATTGAAAGATTTTATGTCAGGGTATGAATGGGAATGATTATAGGAGGAGCTCAGAGAATGGGATAAATGAAATTGTGACTAGAGAGAAGTTGCTGTTCTAAGTAATGACGATGCTTCA-CTCAGTCCTTCT---GGAAGTGTGGTCCCTGTgctagcagcatcagcatcacctgggaacttactAGAACTGCATATTCTCAGGTTAC-ACCCCCAGATCTACCAAATCTGAAATTCCAATAGCAGGCCTCAGCAATCTCTTATTTTAACACAACTGT
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Papio_anubis.CM001492.2                               188158650 339 - 188283584 GGAATTTAGGCAGGAGAACAGGCAAGAGAGT----ACCTCAAGGAGGT-AAGGGTCATTGTGAATATGATAAAATGATAGTTTGGAGGTCTCAGAGAGATTGAAAGATTTTATGTCAGGGTATGAAAGGGAATGATTAAAGGAGGAGCTCAGAGAATGGGATGAATGAAGTTGTGACTACAGAGAAGTTGCTATTATAAGTAATGACGATGCTTCA-CTCAGTCCTTCT---GGAAGTGTGGTCTCTGTgctggcagcatcagcatcacctgggaacttagCAGAACTGCATATTCTCAGGTTAC-ACCCCCAGATCTACCAAACCTGAAATTCCAAGAGCAGGCCTCA--------------------------
i Papio_anubis.CM001492.2                               C 0 I 24
s Papio_cynocephalus.k141_45376                              1743 336 +     25005 ggaatttaggcaggagaacaggcaagagagt----acctcaaggaggt-aagggtcattgtgaatatgataaaatgatagtttggaggtctcagagagattgaaagattttatgtcagggtatgaaagggaatgattaaaggaggagctcagagaatgggatgaatgaagttgtgactacagagaagttgctattataagtaatgacgaTGCTTCA-CTCAgtcct------ggaagtgtggtctctgtgctggcagcatcagcaccacctgggaacttagcagaactgcatattctcaggttac-acccccagatctaccaaacctgaaattccaagagcaggcctca--------------------------
i Papio_cynocephalus.k141_45376                         C 0 I 24
s Papio_hamadryas.Contig15                               47516025 336 +  47705337 ggaatttaggcaggagaacaggcaagagagt----acctcaaggaggt-aagggtcattgtgaatatgataaaatgatagtttggaggtctcagagagattgaaagattttatgtcagggtatgaaagggaatgattaaaggaggagctcagagaatgggatgaatgaagttgtgactacagagaagttgctattataagtaatgacgaTGCTTCA-CTCAgtc---ct---ggaagtgtggtctctgtgctggcagcatcagcaccacccgggaacttagcagaactgcatattctcaggttac-acccccagatctaccaaacctgaaattccaagagcaggcctca--------------------------
i Papio_hamadryas.Contig15                              C 0 I 24
s Papio_kindae.k141_5458022                                 70016 336 -    104429 ggaatttaggcaggagaacaggcaagagagt----acctcaaggaggt-aagggtcattgtgaatatgataaaatgatagtttggaggtctcagagagattgaaagattttatgtcagggtatgaaagggaatgattaaaggaggagctcagagaatggtatgaatgaagttgtgactacagagaagttgctattataagtaatgacgaTGCTTCA-CTCAgtcct------ggaagtgtggtctctgtgctggcagcatcagcaccacctgggaacttagcagaactgcatattctcaggttac-acccccagatctaccaaacctgaaattctaagagcaggcctca--------------------------
i Papio_kindae.k141_5458022                             C 0 I 24
s Papio_papio.k141_979496                                    8545 339 +     14967 ggaatttaggcaggagaacaggcaagagagt----acctcaaggaggt-aagggtcattgtgaatatgataaaatgatagtttggagatctcagagagattgaaagattttatgtcagggtatgaaagggaatgattaaaggaggagctcagagaatgggatgaatgaagttgtgactacagagaagttgctattataagtaatgacgaTGCTTCA-CTcagtccttct---ggaagtgtggtctctgtgctggcagcatcagcaccacccgggaacttagcagaactgcatattctcaggttac-acccccagatctaccaaacctgaaattccaagagcaggcctca--------------------------
i Papio_papio.k141_979496                               C 0 I 24
s Papio_ursinus.k141_1345919                                 4410 339 -      7628 ggaatttaggcaggagaacaggcaagagagt----acctcaaggaggt-aagggtcattgtgaatatgataaaatgatagtttggaggtctcagagagattgaaagattttatgtcagggtatgaaagggaatgattaaaggaggagctcagagaatgggatgaatgaagttgtgactacagagaagttgctattataagtaatgacgaTGCTTCA-CTcagtcct---tctggaagtgtggtctctgtgctggcagcatcagcaccacccgggaacttagcagaactgcatattctcaggttac-acccccagatctaccaaacctgaaattctaagagcaggcctca--------------------------
i Papio_ursinus.k141_1345919                            C 0 I 24
s Piliocolobus_badius.k141_1987485                           4419 361 -      5908 ggaatttaggcaggagaacaggcaagagagt----acctcaaggaggt-aagggtcattgtgaatatgataaaataatggtttggaggtctcagagagactgaaggattttatgtcagggtatgaaagggaatgattaaaggaggagctcagagaatgggatgaatgcagttgtgact--agagaagttgccattgtaagtaatgacgaTGCTTCA-CTcagtccttct---ggaagtatgttctctgtgctggcagcatcagcatcacctgggaacttaccagaactgcatattctcaggttgc-acccccagacctaccaaatctgaaattctaagagcaggcctcaggaatctc--attttaacacaactgt
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       5038 361 -     17985 ggaatttaggcaggagaacaggcaagagagt----acctcaaggaggt-aagggtcattgtgaatatgataaaataatagtttggaggtctcagagagactgaaagattttatgtcagggtatgaaagggaatgattaaaggaggagctcagagaatgggatgaatgaagttgtgact--agagaagttgccattgtaagtaatgacgaTGCTTCA-CTcagtccttct---ggaagtgtgttctctgtgctggcagcatcagcatcacctgggaacttaccagaactgcatattctcaggttgc-acccccagatctaccaaatctgaaattctaagagcaggcctcaggaatctc--attttaacacaactgt
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            4405 361 +      7694 ggaatttaggcaggagaacaggcaagagagt----acctcaaggaggt-aagggtcattgtgaatatgataaaataatagtttggaggtctcagagagactgaaagattttatgtcagggtatgaaagggaatgattaaaggaggagctcagagaatgggatgaatgaagttgtgact--agagaagttgccattgtaagtaatgacaaTGCTTCA-CTcagtccttct---ggaagtgtgttctctgtgctggcagcatcagcatcacctgggaacttaccagaactgcatattctcaggttgc-acccccagatctaccaaatctgaaattctaagagcaggcctcaggaatctc--attttaacacaactgt
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26742889 360 +  26888534 GGAATTTAGGCAGGAGAACAGGCAAGAGAGT----ACCTCAAGGAGGT-AAGGGTCATTGtgaatatgataaaataatagtTTGGAGGTCTCAGAGAGACTGAAGGATTTTATGTCAGGGTATGAAAGGGAATGATTAAAGGAGGAGCTCAGAGAATGGGATGAATGAAGTTGTGACT--AGAGAAGTTGCCATTGTAAGTAATGACGATGCTTCA-CTCAGTCCTTCT---GGAAGTGTGTTCTCTGTGctggcagcatcagcatcacctgg-aactTACCAGAACTGCATATTCTCAGGTTGC-ACCCCCAGATTTACCAAATCTGAAATTCTAAGAGCAGGCCTCAGGAATCTC--ATTTTAACACAACTGT
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       24949 333 +     44506 ggaatttaggcaggagaacaggcaa--agtt----acaccatggaggt-aagggtcactgtgaatatgataaaataacagtttggaggtctcagagagattgaaagattttatttcaggatatgaaagagaatgattaaaagagaagatcagagaatgggatgaatgaaattgtgactacagagaagttgccattataagaaatggcaGTGCTTCA-CTCAACCAttct---ggaaatgtggtctctgtgttagcagcaacagcatcacctgagaacttactagaactgcttattctcaggcttc-acccttggaactaccaaatctgaaattccaagagtagga------------------------------
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        25162 333 +     67491 ggaatttaggcaggagaacaggcaa--agtt----acaccatggaggt-aagggtcactgtgaatatgataaaataacagtttggaggtctcagagagattgaaacattttatttcaggatatgaaagagaatgattaaaagagaagatcagagaatgggatgaatgaaattgtgactacagagaagttgccattataagaaatggcaGTGCTTCA-CTCAACCAttct---ggaaatgtggtctctgtgttagcagcaacagcatcacctgagaacttactagaactgcttattctcaggcttc-acccttggaactaccaaatctgaaattccaagagtagga------------------------------
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      15401 333 -     98129 ggaatttaggcaggagaacaggcaa--agtt----acaccatggaggt-aagggtcactgtgaatatgataaaataacagtttggaggtctcagagagattgaaagattttatttcaggatatgaaagagaatgattaaaagagaagatcagagaatgggatgaatgaaattgtgactacagagaagttgccattataagaaatggcaGTGCTTCA-CTCAACCAttct---ggaaatgtggtctctgtgttagcagcaacagcatcacctgagaacttactagaactgcttattctcaggcttc-acccttggaactaccaaatctgaaattccaagagtagga------------------------------
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     25001 333 +    147771 ggaatttaggcaggagaacaggcaa--agtt----acaccatggaggt-aagggtcactgtgaatatgataaaataacagtttggaggtgtcagagagattgaaagattttatttcaggatatgaaagagaatgattaaaagagaagatcagagaatgggatgaatgaaattgtgactacagagaagttgccattataagaaatggcaTTGCTTCA-CTCAACCAttct---ggaaatgtggtctctgtgttagcagcaacagcatcacctgagaacttactagaactgcttattctcaggcttc-acccttggaactaccaaatctgaaattccaagagtagga------------------------------
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         1637 333 -     43940 ggaatttaggcaggagaacaggcaa--agtt----acaccatggaggt-aagggtcactgtgaatatgataaaataacagtttggaggtctcagagagattgaaagattttatttcaggatatgaaagagaatgattaaaagagaagatcagagaatgggatgaatgaaattgtgactacagagaagttgccattataagaaatggcaGTGCTTCA-CTCAACCAttct---ggaaatgtggtctctgtgttagcagcaacagcatcacctgagaacttactagaactgcttattctcaggcttc-acccttggaactaccaaatctgaaattccaagagtagga------------------------------
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          5720 333 -     55515 ggaatttaggcaggagaacaggcaa--agtt----acaccatggaggt-aagggtcactgtgaatatgataaaataacagtttggaggtctcagagagattgaaagattttatttcaggatatgaaagagaatgattaaaagagaagatcagagaatgggatgaatgaaattgtgactacagagaagttgccattataagaaatggcaGTGCTTCA-CTCAACCAttct---ggaaatgtggtctctgtgttagcagcaacagcatcacctgagaacttactagaactgcttattctcaggcttc-acccttggaactaccaaatctgaaattccaagagtagga------------------------------
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         25074 333 +    152463 ggaatttaggcaggagaacaggcaa--agtt----acaccatggaggt-aagggtcactgtgaatatgataaaataacagtttggaggtctcagagagattgaaagattttatttcaggatatgaaagagaatgattaaaagagaagatcagagaatgggatgaatgaaattgtgactacagagaagttgccattataagaaatggcaGTGCTTCA-CTCAACCAttct---ggaaatgtggtctctgtgttagcagcaacagcatcacctgggaacttactagaactgcttattctcaggcttc-acccttggaactaccaaatctgaaattccaagagtagga------------------------------
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       2882 333 -    119457 ggaatttaggcaggagaacaggcaa--agtt----acaccatggaggt-aagggtcactgtgaatatgataaaataacagtttggaggtctcagagagattgaaagattttatttcaggatatgaaagagaatgattaaaagagaagatcagagaatgggatgaatgaaattgtgactacagagaagttgccattataagaaatggcaGTGCTTCA-CTCAACCAttct---ggaaatgtggtctctgtgttagcagcaacagcatcacctgggaacttactagaactgcttattctcaggcttc-acccttggaactaccaaatctgaaattccaagagtagga------------------------------
i Plecturocebus_hoffmannsi.k141_985533                  I 94 C 0
s Plecturocebus_miltoni.k141_841561                         14797 333 +    134592 ggaatttaggcaggagaacaggcaa--agtt----acaccatggaggt-aagggtcactgtgaatatgataaaataacagtttggatgtctcagagagattgaaagattttatttcaggatatgaaagagaatgattaaaagagaagatcagagaatgggatgaatgaaattgtgactacagagaagttgccattataagaaatggcaGTGCTTCA-CTCAACCAttct---ggaaatgtggtctctgtgttagcagcaacagcatcacctgggaacttactagaactgcttattctcaggcttc-acccttggaactaccaaatctgaaattccaagagtagga------------------------------
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          25384 333 -     75465 ggaatttaggcaggagaacaggcaa--agtt----acaccatggaggt-aacggtcactgtgaatatgataaaataacagtttggaggtctcagagagattgaaagattttatttcaggatatgaaagagaatgattaaaagagaagatcagagaatgggatgaatgaaattgtgactacagagaagttgccattataagaaatggcaGTGCTTCA-CTCAACCAttct---ggaaatgtggtctctgtgttagcagcaacagcatcacctgggaacttactagaactgcttattctcaggcttc-acccttggaactaccaaatctgaaattccaagagtagga------------------------------
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              189529 365 -    373494 GGAATTTAGGCAGGAGAACAGGCAACAGAGT----ACATCAAGGAGGT-AAGGGTCATTGTgaatatgataaaataatagtttggaggtctcagagagattgaaatattttatgtcaGGGTATGAAAGGGAATGATTAAAGGAGGAGCTCAGAGAATGGGATGAATGAAATTGTGACTACAGAGAAGTTGCTATTATAAGTAATGACGATGCTTCA-TTCAGTCCTTCT---GGAAGTGTGGTCCCTGTgctagcagcatcagcatcacctgggaaattACTAGAACTGCATATTCTCAGGTTAC-ACCCCCAGAGCTACCAAATCTGAAATTCCAATAGCAGGCCTCAGCAAGCTCTTATTTTAACACAACTGT
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19810176 365 +  19899266 ggaatttaggcaggagaacaggcaacagagt----acatcaaggaggt-aagggtcattgtgaatatgataaaataatagtttggaggtctcagagagattgaaatattttatgtcagggtatgaaagggaatgattaaaggaggagctcagagaatgggatgaatgaaattgtgactacagagaagttgctattataagtaatgacgatgcttca-ctcagtccttct---ggaagtgtggtccctgtgctagcagcatcagcatcacctgggaaattactagaactgcatattctcaggttac-acccccagagctaccaaatctgaaattccaatagcaggcctcagcaagctcttattttaacacaactgt
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               8161 363 -     15069 ggaatttaggcaggagaacaggcaagagagt----acctcaaggaggt-aagggtcattgtgaatatgataaaataattgtttggaggtctcagagagactgaaagattttatgtcagggtatgaaagggaatgattaaaggaggagctcagagaatgggatgaatgaagttgtgactacagagaagttgctattgtaagtaatgacgaTGCTTCA-CTcagtccttct---ggaagtgtggtctctgtgctggcagcatcagcatcacctgggaacttaccagaactgcatattctcaggttac-acccccagatctaccaaatctgaaattctaagagcaggcctcaggaatctc--attttaacacaactgt
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              8276 363 +     14865 ggaatttaggcaggagaacaggcaagagagt----acctcaaggaggt-aagggtcattgtgaatatgataaaataatagtttggaggtctcagagagactgaaagattttatgtcagggtatgaaagggaatgattaaaggaggagctcagagaatgggatgaatgaagttgtgactacagagaagttgctattgtaagtaatgacgaTGCTTCA-CTcagtccttct---ggaagtgtggtctctgtgctggcagcatcagcatcacctgggaacttaccagaactgcatattctcaggttac-acccccagatctaccaaatctgaaattctaagagcaggcctcaggaatctc--attttaacacaactgt
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Pygathrix_cinerea.k141_374971                             32266 363 +     56732 ggaatttaggcaggagaacaggcaagagagt----acctcaaggaggt-aagggtcattgtgaatatgataaaataatagtttggaggtctcagagagactgaaagattttatgtcagggtatgaaagggaatgattaaaggaggagctcagagaatgggatgaatgaagttgtgactacagagaagttgctattgtaagtaatgacaaTGCTTCA-CTcagtccttct---ggaagtgtggtctctgtgctggcagcatcagcatcacctgggaacttaccagaactgcatattctcaggttac-acccccagatctaccaaatctgaaattctaagagcaggcctcaggaatctc--attttaacacaactgt
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6808763 363 +   6970761 ggaatttaggcaggagaacaggcaagagagt----acctcaaggaggt-aagggtcattgtgaatatgataaaataatagtttggaggtctcagagagactgaaagattttatgtcagggtatgaaagggaatgattaaaggaggagctcagagaatgggatgaatgaagttgtgactacagagaagttgctattgtaagtaatgacaaTGCTTCA-CTcagtccttct---ggaagtgtggtctctgtgctggcagcatcagcatcacctgggaaattaccagaactgcatattctcaggttac-acccccagatctaccaaatctgaaattctaagagcaggcctcaggaatctc--attttaacacaactgt
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             8152 363 +     18040 ggaatttaggcaggagaacaggcaagagagt----acctcaaggaggt-aagggtcattgtgaatatgataaaataatagtttggaggtctcagagagactgaaagattttatgtcagggtatgaaagggaatgattaaaggaggagctcagagaatgggatgaatgaagttgtgactacagagaagttgctattgtaagtaatgacaaTGCTTCA-CTcagtccttct---ggaagtgtggtctctgtgctggcagcatcagcatcacctgggaaattaccagaactgcatattctcaggttac-acccccagatctaccaaatctgaaattctaagagcaggcctcaggaatctc--attttaacacaactgt
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rhinopithecus_bieti.k119_554384                            2532 363 -     17045 ggaatttaggcaggagaacaggcaagagagt----acctcaaggaggt-aagggtcattgtgaatatgataaaataatagtttggaggtctcagagagactgaaagattttatgtcagggtatgaaagggaatgattaaaggaggagctcagagaatgggatgaatgaagttgtgactacagagaagttgctattgcaagtaatgacaaTGCTTCA-CTcagtccttct---ggaagtgtggtctctgtgctgacagcatcagcatcacctgggaacttaccagaactgcatattctcaggttac-acccccagatctaccaaatctgaaattctaagagcaggcctcaggaatctc--attttaacacaactgt
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206380019 363 - 206558726 GGAATTTAGGCAGGAGAACAGGCAAGAGAGT----ACCTCAAGGAGGT-AAGGGTCATTGtgaatatgataaaataatagtTTGGAGGTCTCAGAGAGACTGAAAGATTTTATGTCAGGGTATGAAAGGGAATGATTAAAGGAGGAGCTCAGAGAATGGGATGAATGAAGTTGTGACTACAGAGAAGTTGCTATTGCAAGTAATGACAATGCTTCA-CTCAGTCCTTCT---GGAAGTGTGGTCTCTGTGctggcagcatcagcatcacctgggaacttaccAGAACTGCATATTCTCAGGTTAC-ACCCCCAGATCTACCAAATCTGAAATTCTAAGAGCAGGCCTCAGGAATCTC--ATTTTAACACAACCGT
i Rhinopithecus_roxellana.NC_044549.1                   I 176 C 0
s Rhinopithecus_strykeri.ctg4                            44858922 363 -  45163003 ggaatttaggcaggagaacaggcaagagagt----acctcaaggaggt-aagggtcattgtgaatatgataaaataatagtttggaggtctcagagagactgaaagattttatgtcagggtatgaaagggaatgattaaaggaggagctcagagaatgggatgaatgaagttgtgactacagagaagttgctattgcaagtaatgacaaTGCTTCA-CTcagtccttct---ggaagtgtggtctctgtgctgacagcatcagcatcacctgggaacttaccagaactgcatattctcaggttac-acccccagatctaccaaatctgaaattctaagagcaggcctcaggaatctc--attttaacacaactgt
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15674803 363 -  43202129 GGAATTTAGGCAGGAGAACAGGCAA--AATT----ACACCAAGGAGGT-GAGGGTCACTGtgaatatgataaaataataatttggaggCCTCAGAGAGattgaaagattttatttcaagatATGAAAGAGAATGATTAAAGGAGAAGCTCGGAGAATGGGATGAATGAAATTGTGACTACAGAGAAGTTGCCATCATAAGAAATGACAGTGCTTCA-CTCAGTTATTCT---GGAAATGCGGTCACTGTgttagcagcatcagcatcacctgggaacttactAGAACTGCATATTCTTAGGCTTC-ACCCCTAGAACTACCAAATCTGAAATTTCAAGAGTAGGACTCAGCAATCTCTTATTTTAACACAACTGT
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        6716 363 +     34089 ggaatttaggcaggagaacaggcaa--aatt----acaccaaggaggt-gagggtcactgtgaatatgataaaataataatttggaggtctcagagagattgaaagattttatttcaagatatgaaagagaatgattaaaggagaagctcggagaatgggatgaatgaaattgtgactacagagaagttgccatcataagaaatgacaGTGCTTCA-CTcagtcattct---ggaaatgtggtcactgtgttagcagcatcagcatcacctgggaacttactagaactgcatattcttaggcttc-acccctagaactaccaaatctgaaattccaagagtaggactcagcaatctcttattttaacacaactgt
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              6658 363 -     60842 ggaatttaggcaggagaacaggcaa--aatt----acaccaaggaggt-gagggtcactgtgaatatgataaaataataatttggaggtctcagagagattgaaagattttatttcaagatatgaaagagaatgattaaaggagaagctcggagaatgggatgaatgaaattgtgactacagagaagttgccatcataagaaatgacaGTGCTTCA-CTcagtcattct---ggaaatgtggtcactgtgttagcagcatcagcatcacctgggaacttactagaactgcatattcttaggcttc-acccctagaactaccaaatctgaaattccaagagtaggactcagcaatctcttattttaacacaactgt
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              6751 363 +     67014 ggaatttaggcaggagaacaggcaa--aatt----acaccaaggaggt-gagggtcactgtgaatatgataaaataataatttggaggtctcagagagattgaaagattttatttcaagatatgaaagagaatgattaaaggagaagctcggagaatgggatgaatgaaattgtgactacagagaagttgccatcgtaagaaatgacaGTGCTTCA-CTcagtcattct---ggaaatgtggtcactgtgttagcagcatcagcatcacctgggaacttactagaactgcatattcttaggcttc-acccctagaactaccaaatctgaaattccaagagtaggactcagcaatctcttattttaacacaactgt
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              6729 363 +     60816 ggaatttaggcaggagaacaggcaa--aatt----acaccaaggaggt-gagggtcactgtgaatatgataaaataataatttggaggtctcagagagattgaaagattttatttcaagatatgaaagagaatgattaaaggagaagctcggagaatgggatgaatgaaattgtgactacagagaagttgccatcataagaaatgataGTGCTTCA-CTcagtcattct---ggaaatgtggtcactgtgttagcagcatcagcatcacctgggaacttactagaactgcatattcttaggcttc-acccctagaactaccaaatctgaaattccaagagtaggactcagcaatctcttattttaacacaactgt
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 6666 363 -     76454 ggaatttaggcaggagaacaggcaa--aatt----acaccaaggaggt-gagggtcactgtgaatatgataaaataataatttggaggtctcagagagattgaaagattttatttcaagatatgaaagagaatgattaaaggagaagctcggagaatgggatgaatgaaattgtgactacagagaagttgccatcataagaaatgacaGTGCTTCA-CTcagtcattct---ggaaatgtggtcactgtgttagcagcatcagcatcacctgggaacttactagaactgcatattcttaggcttc-acccctagaactaccaaatctgaaattccaagagtagaactcagcaatctcttattttaacacaactgt
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17343396 364 -  30362882 ggaatttaggcaggagaacaggcaa--aatt----aaaccaaggaggt-aagggtcactgtgaatataataaaatagtagtttggaggtctcagagagattgaaagattttatttcaagatatgaaagagaatgattaaaggagaagctcagagaatgggatgaatgaaattgtgactacagagaagttgccattataagaaatgacagtgcttcg-ctcagtcattct---ggaaatgtggtcactgtgttagcagcatcagcatcacctgggaacttactagaactgcatattctcaggcttcaacccctagagctaccaaatctgaaattccaagagtaggactcagcaatctcttattttaacacaactgt
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         22757 364 -     62485 ggaatttaggcaggagaacaggcaa--aatt----acaccaaggaggt-aagggtcactgtgaatataataaaatagtagtttggaggtctcagagagattgaaagattttatttcaagatatgaaagagaatgattaaaggagaagctcagagaatgggatgaatgaaattgtgactacagagaagttgccattataagaaatgacagtgctttg-ctcagtcattct---ggaaatgtggtcactgtgttagcagcatcagcatcacctgggaacttactagaactgcatattctcaggcttcaacccctagagctaccaaatctgaaattccaagagtaggactcagcaatctcttattttaacacaactgt
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Semnopithecus_entellus.k141_1572367                        5768 363 +     15331 ggaatttaggcaggagaacaggcaagagagt----acctcaaggaggt-aagggtcattgtgaatatgataaaataatagtttggaggtctcagagagactgaaagattgtatgtcagggtatgaaagggaatgattaaaggaggagctcagagaatgggatgaatgaagttgtgactacagagaagttgatattgtaagtaatgacgaTGCTTCA-CTcagtccttct---ggaagtgtggtctctgtgagggcagcatcagcatcacctgggaacttaccagaactgcatattctcaggttac-acccccagatctaccaaatctgaaattctaagagcaggcctcaggaatctc--attttaacataactgt
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      11143 363 +     20762 ggaatttaggcaggagaacaggcaagagagt----acctcaaggaggt-aagggtcattgtgaatatgataaaataatagtttggaggtctcagagagactgaaagattgtatgtcagggtatgaaagggaatgattaaaggaggagctcagagaatgggatgaatgaagttgtgactacagagaagttgctattgtaagtaatgacgaTGCTTCA-CTcagtccttct---ggaagtgtggcctctgtgagggcagcatcagcatcacctgggaacttaccagaactgcatattctcaggttac-acccccagatctaccaaatctgaaattctaagagcaggcctcaggaatctc--attttaacacaactgt
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         121147 363 +    130994 ggaatttaggcaggagaacaggcaagagagt----acctcaaggaggt-aagggtcattgtgaatatgataaaataatagtttggaggtctcagagagactgaaagattgtatgtcagggtatgaaagggaatgattaaaggaggagctcagagaatgggatgaatgaagttgtgactacagagaagttgctattgtaagtaatgacgaTGCTTCA-CTcagtccttct---ggaagtgtggtctctgtgagggcagcatcagcatcacctgggaacttaccagaactgcatattctcaggttac-acccccagatctaccaaatctgaaattctaagagcaggcctcaggaatctc--attttaacacaactgt
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           39927 363 +     46263 ggaatttaggcaggagaacaggcaagagagt----acctcaaggaggt-aagggtcattgtgaatatgataaaataatagtttggaggtctcagagagactgaaagattttatgtcagggtatgaaagggaatgattaaaggaggagctcagagaatgggatgaatgaagttgtgactacagagaagttgctattgtaagtaatgacgaTGCTTCA-CTcagtccttct---ggaagtgtggcctctgtgagggcagcatcagcatcacctgggaacttaccagaactgcatattctcaggttac-acccccagatctaccaaatctgaaattctaagagcaggcctcaggaatctc--attttaacacaactgt
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     33072 363 +     42640 ggaatttaggcaggagaacaggcaagagagt----acctcaaggaggt-aagggtcattgtgaatatgataaaataatagtttggaggtctcagagagactgaaagattgtatgtcagggtatgaaagggaatgattaaaggaggagctcagagaatgggatgaatgaagttgtgactacagagaagttgctattgtaagtaatgacgaTGCTTCA-CTcagtccttct---ggaagtgtggtctctgtgagggcagcatcagcatcacctgggaacttaccagaactgcatattctcaggttac-acccccagatctaccaaatctgaaattctaagagcaggcctcaggaatctc--attttaacataactgt
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        16094 363 +     30600 ggaatttaggcaggagaacaggcaagagagt----acctcaaggaggt-aagggtcattgtgaatatgataaaataatagtttggaggtctcagagagactgaaagattgtatgtcagggtatgaaagggaatgattaaaggaggagctcagagaatgggatgaatgaagttgtgactacagagaagttgctattgtaagtaatgacgaTGCTTCA-CTcagtccttct---ggaagtgtggtctctgtgagggcagcatcagcatcacctgggaacttaccagaactgcatattctcaggttac-acccccagatctaccaaatctgaaattctaagagcaggcctcaggaatctc--attttaacacaactgt
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        17265 367 -  13920577 ggaatttaggcaggagaacaggcaatagagt-c-gacatcaaggaggt-aagggtcattgtgaatatgataaaataatagtttggaggtctcagagagattgaaaaattttatgtcagtgtatgaaaaggaatgattaaaggaggagctcagagaatgggatgaatgaaattgtgactacagagaagttgctattataagtaatgacaatgcttca-ctcagtccttct---ggaagtgtggtccctgtgctagcagcatcagcatcacctgggaacttactagaactgcaaattctcaggttac-acccccagatctaccaaatctgaaattccaatagcaggtctcagcaatctcttattttaacacaactgt
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Theropithecus_gelada.CM009951.1                       194010185 336 - 194193292 GGAATTTAGGCAGGAGAACAGGCAAGAGAGT----ACCTCAAGGAGGT-AAGGGTCATTGTGAATATGATAAAATGATAGTTTGGAGGTCTCAGAGAGATTGAAAGATTTTATGTCAGGGTATGAAAGGGAATGATTAAAGGAGGAGCTCAGAGAATGGGATGAATGAAGTTGTGACTACAGAGAAGTTGCTATTATAAGTAATGACGATGCTTCA-CTCAGtcct------ggaagtgtggtctctgtgctggcagcatcagcaccacctgggaactcagcagaactgcatattctcaggttac-acccCCAGATCTACCAAACCTGAAATTCCAAGAGCAGGCCTCA--------------------------
i Theropithecus_gelada.CM009951.1                       C 0 I 24
s Trachypithecus_auratus.k141_738098                        29415 363 +     38948 ggaatttaggcaggagaacaggcaagagagt----acctcaaggaggt-aagggtcattgtgaatatgataaaataatagtttggaggtctcagagagactgaaagattttatgtcagggtatgaaatggaatgattaaaggaggagctcagagaatgggatgaatgaagttgtgactacagagaagttgctattgtaagtaatgacgaTGCTTCA-CTcagtccttct---ggaagtgtggtctctgtgctggcagcatcagcatcacctgggaacttaccagaactgcatattctcaggttac-acccccagatctaccaaatctgaaattctaagagcaggcctcaggaatctc--attttaacacaactgt
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   22975 363 -     32910 ggaatttaggcaggagaacaggcaagagagt----acctcaaggaggt-aagggtcattgtgaatatgataaaataatagtttggaggtctcagagagactgaaagattttatgtcagggtatgaaatggaatgattaaaggaggagctcagagaatgggatgaatgaagttgtgactacagagaagttgctattgtaagtaatgacgaTGCTTCA-CTcagtccttct---ggaagtgtggtctctgtgctggcagcatcagcatcacctgggaacttaccagaactgcatattctcaggttac-acccccagatctaccaaatctgaaattctaagagcaggcctcaggaatctc--attttaacacaactgt
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      4876 363 -     12939 ggaatttaggcaggagaacaggcaagagagt----acctcaaggaggt-aagggtcattgtgaatatgataaaataatagtttggaggtctcagagagactgcaagattttatgtcagggtatgaaatggaatgattaaaggaggagctcagagaatgggatgaatgaagttgtgactacagagaagttgctattgtaagtaatgacgaTGCTTCA-CTcagtccttct---ggaagtgtggtctctgtgctggcagcatcagcatcacctgggaacttaccagaactgcatattctcaggttac-acccccagatctaccaaatctgaaattctaagagcaggcctcaggaatctc--attttaacacaactgt
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       4304 363 -     14244 ggaatttaggcaggagaacaggcaagagagt----acctcaaggaggt-aagggtcattgtgaatatgaaaaaataatagtttggaggtctcagagagactgaaagattttatgtcagggtatgaaagggaatgattaaaggaggagctcagagaatgggatgaatgaagttgtgactacagagaagttgctattgtaagtaatgacgaTGCTTCA-CTcagtccttct---ggaagtgtggtctctgtgctggcagcatcagcatcacctgggaacttaccagaactgcatattctcaggttac-acccccagatctaccaaatctgaaattctaagagcaggcctcaggaatctc--attttaacacaactgt
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           45697 363 -     54611 ggaatttaggcaggagaacaggcaagagagt----acctcaaggaggt-aagggtcattgtgaataagataaaataatagtttggaggtctcagagagactgaaagattttatgtcagggtatgaaagggaatgattaaaggaggagctcagagaatgggatgaatgaagttgtgactacagagaagttgctattgtaagtaatgacgaTGCTTCA-CTcagtccttct---ggaagtgtggtctctgtgagggcagcatcagcattacctgggaacttaccagaactgcatattctcaggttac-atccccagatctaccaaatctgaaattctaagagcaggcctcaggaatctc--attttaacacaactgt
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        3498 363 -     11566 ggaatttaggcaggagaacaggcaagagagt----acctcaaggaggt-aagggtcattgtgaatatgataaaataatagtttggaggtctcagagagactgaaagattttatgtcagggtatgaaagggaatgattaaaggaggagctcagagaatgggatgaatgaagttgtgactacagagaagttgctattgtaagtaatgacgaTGCTTCA-CTcagtccttct---ggaagtgtggtctctgtgctggcagcatcagcatcacctgggaacttaccagaactgcatattctcaggttac-acccccagatctaccaaatctgaaattctaagagcaggcctcaggaatctc--attttaacacaactgt
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     5682 363 -     15592 ggaatttaggcaggagaacaggcaagagagt----acctcaaggaggt-aagggtcattgtgaatatgataaaataatagtttggaggtctcagagagactgaaagattttatgtcagggtatgaaagggaatgattaaaggaggagctcagagaatgggatgaatgaagttgtgactacagagaagttgctattgtaagtaatgacgaTGCTTCA-CTcagtccttct---ggaagtgtggtctctgtgctggcagcatcagcatcacctgggaacttaccagaactgcatattctcaggttac-acccccagatctaccaaatctgaaattctaagagcaggcctcaggaatctc--attttaacacaactgt
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          4334 363 +     14371 ggaatttaggcaggagaacaggcaagagagt----acctcaaggaggt-aagggtcattgtgaatatgaaaaaataatagtttggaggtctcagagagactgaaagattttatgtcagggtatgaaagggaatgattaaaggaggagctcagagaatgggatgaatgaagttgtgactacagagaagttgctattgtaagtaatgacgaTGCTTCA-CTcagtccttct---ggaagtgtggtctctgtgctggcagcatcagcatcacctgggaacttaccagaactgcatattctcaggttac-acccccagatctaccaaatctgaaattctaagagcaggcctcaggaatctc--attttaacacaactgt
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   2620 363 +     12481 ggaatttaggcaggagaacaggcaagagagt----acctcaaggaggt-aagggtcattgtgaatatgaaaaaataatagtttggaggtctcagagagactgaaagattttatgtcagggtatgaaagggaatgattaaaggaggagctcagagaatgggatgaatgaagttgtgactacagagaagttgctattgtaagtaatgacgaTGCTTCA-CTcagtccttct---ggaagtgtggtctctgtgctggcagcatcagcatcacctgggaacttaccagaactgcatattctcaggttac-acccccagatctaccaaatctgaaattctaagagcaggcctcaggaatctc--attttaacacaactgt
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        2601 363 -     24393 ggaatttaggcaggagaacaggcaagagagt----acctcaaggaggt-aagggtcattgtgaatatgataaaataatagtttggaggtctcagagagactgaaagattttatgtcagggtatgaaagggaatgattaaaggaggagctcagagaatgggatgaatgaagttgtgactacagagaagttgctattgtaagtaatgacgaTGCTTCA-CTcagtccttct---ggaagtgtggtctctgtgctggcagcatcagcatcacctgggaacttaccagaactgcatattctcaggttac-acccccagatctaccaaatccgaaattctaagagcaggcctcaggaatctc--attttaacacaactgt
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       7745 363 -     28054 ggaatttaggcaggagaacaggcaagagagt----acctcaaggaggt-aagggtcattgtgaatatgataaaataatagtttggaggtctcagagagactgaaagattttatgtcagggtatgaaatggaatgattaaaggaggagctcagagaatgggatgaatgaagttgtgactacagagaagttgctattgtaagtaatgacgaTGCTTCA-CTcagtccttct---ggaagtgtggtctctgtgctggcagcatcagcatcacctgggaacttaccagaactgcatattctcaggttac-acccccagatctaccaaatctgaaattctaagagcaggcctcaggaatctc--attttaacacaactgt
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44662529 363 -  44834318 ggaatttaggcaggagaacaggcaagagagt----acctcaaggaggt-aagggtcattgtgaatatgataaaataatagtttggaggtctcagagagactgaaagattttatgtcagggtatgaaatggaatgattaaaggaggagctcagagaatgggatgaatgaagttgtgactacagagaagttgctattgtaagtaatgacgaTGCTTCA-CTcagtccttct---ggaagtgtggtctctgtgctggcagcatcagcatcacctgggaacttaccagaactgcatattctcaggttac-acccccagatctaccaaatctgaaattctaagagcaggcctcaggaatctc--attttaacacaactgt
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       4841 363 +     13828 ggaatttaggcagaagaacaggcaagagagt----acctcaaggaggt-aagggtcattgtgaataagataaaataatagtttggaggtctcagagagactgaaagattttatgtcagggtatgaaagggaatgattaaaggaggagctcagagaatgggatgaatgaagttgtgactacagagaagttgctattgtaagtaatgacgaTGCTTCA-CTcagtctttct---ggaagtgtggtctctgtgagggcagcatcagcatcacctgggaacttaccagaactgcatattctcaggttac-atccccagatctaccaaatctgaaattctaagagcaggcctcaggaatctc--attttaacacaactgt
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
e Eptesicus_fuscus.JH977687.1                             4708429 237 +   6522550 I
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590  76 -     47444 I
e Petromus_typicus.PetTyp_scaffold_33007                    16921   0 -     36578 C
e Sorex_araneus.JH798170.1                               17769647   0 -  27805282 C
e Dinomys_branickii.DinBra_scaffold_1996                   158442 1030 +    228994 I
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           4051 456 -      6963 I
e Oryctolagus_cuniculus.CM000803.1                      141878516 2929 + 163896628 I
e Ochotona_princeps.JH802095.1                            4996729 2205 -  23139505 I
e Lepus_americanus.LepAme_scaffold_62849                    15480 2946 +     22452 I
e Perognathus_longimembris.PerPac_flattened_line_19359       1614  38 +     49596 I
e Dipodomys_stephensi.DipSte_scaffold_84338                  1789  28 -     11986 I
e Dipodomys_ordii.KN672545.1                              3659429  30 +   4240102 I
e Suricata_suricatta.SurSur_flattened_line_20339            32401   0 +     62062 C
e Ziphius_cavirostris.ZipCav_flattened_line_60625            1538   2 -     13665 I
e Zalophus_californianus.ZalCal_flattened_line_4097        219280   0 -    227762 C
e Vulpes_lagopus.VulLag_flattened_line_2045                143835   0 -    281493 C
e Vicugna_pacos.KN269600.1                                1527832   0 -   2331223 C
e Ursus_maritimus.KK498671.1                              6519892   0 +  28682327 C
e Uropsilus_gracilis.UroGra_scaffold_69449                   9768   0 +     10241 C
e Tursiops_truncatus.MRVK01000923.1                      69316794   2 -  96451834 I
e Trichechus_manatus.JH594618.1                          16088878   0 +  31416278 C
e Tragulus_javanicus.TraJav_scaffold_14717                   9149   2 +     90398 I
e Tonatia_saurophila.TonSau_scaffold_3334                  137563 275 -    259118 I
e Tapirus_terrestris.TapTer_scaffold_14939                  61041   0 +     99546 C
e Tapirus_indicus.TapInd_scaffold_176                      810399   0 +   1148477 C
e Tamandua_tetradactyla.TamTet_scaffold_26877               16259 379 +     45698 I
e Tadarida_brasiliensis.TadBra_scaffold_61492                1822 242 +     20549 I
e Sus_scrofa.CM000824.4                                 189273670 1086 + 218635234 I
e Spilogale_gracilis.SpiGra_flattened_line_905             238244   0 -    276980 C
e Solenodon_paradoxus.SolPar_flattened_line_1012            23185   0 +    739146 C
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   39231   0 -    114521 C
e Saiga_tatarica.SaiTat_scaffold_1069354                      105   0 -       709 C
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Rhinolophus_sinicus.LVEH01000179.1                      1792212   2 +   2252614 I
e Rangifer_tarandus.RanTarSib_scaffold_24239                20109   0 +     68503 C
e Puma_concolor.QAVW01000427.1                          131539433   0 - 161321710 C
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Pteronura_brasiliensis.PteBra_flattened_line_1343        249686   0 -    344369 C
e Pteronotus_parnellii.KE867983.1                            5588 252 -     27784 I
e Procavia_capensis.ProCapCap_scaffold_11797                50321   0 -     88779 C
e Platanista_gangetica.PlaMin_flattened_line_72990           8998   2 +     21690 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Phocoena_phocoena.PhoPho_flattened_line_53071              2530   2 +      8220 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    120818   0 -    135482 C
e Pantholops_hodgsonii.KE114631.1                         1071126   0 -   1292953 C
e Panthera_tigris.KE721879.1                              5032785   0 -   6340057 C
e Panthera_pardus.KV860323.1                              3643137   0 +  18214204 C
e Panthera_onca.PanOnc_flattened_line_1615                  39322   0 +    295523 C
e Ovis_canadensis.OviCan_scaffold_6251                      83485   0 +    140051 C
e Ovis_aries.CM001582.2                                 134082257   0 - 275406953 C
e Otocyon_megalotis.JAEUCK010005121.1                      314612   0 -    505867 C
e Orycteropus_afer.OryAfe_flattened_line_13509              63439   0 -     66828 C
e Orcinus_orca.KB316965.1                                 7228065   2 -   7562323 I
e Okapia_johnstoni.LVCL01S0017931.1                         41334   0 +     78940 C
e Odocoileus_virginianus.KZ101650.1                       1083245   0 +   1425656 C
e Odobenus_rosmarus.KB229369.1                             684428   0 -   3126709 C
e Nyctereutes_procyonoides.CAJHUB010000786.1                37467   0 +   3668941 C
e Noctilio_leporinus.NocLep_scaffold_12062                  50214  77 +     94413 I
e Neophocaena_asiaeorientalis.KZ688543.1                  3954389   2 -   4490290 I
e Neomonachus_schauinslandi.NINY01007774.1                4489721   0 -  14209539 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             6589 379 -      8794 I
e Myotis_myotis.MyoMyo_scaffold_6123                        13515 236 +     66751 I
e Myotis_lucifugus.GL429887.1                             3468272 238 -   3747815 I
e Myotis_davidii.KB114863.1                               5022194 233 +   6462685 I
e Myotis_brandtii.KE161952.1                               970769 237 +   8389877 I
e Mustela_putorius.JH417978.1                             4427567   0 -  28371801 C
e Murina_feae.MurFea_scaffold_2254                          23900 236 -    100666 I
e Mungos_mungo.MunMun_flattened_line_8729                  149746   0 -    168139 C
e Moschus_moschiferus.MosMos_scaffold_78805                  5813   0 -     19904 C
e Mormoops_blainvillei.MorMeg_scaffold_2952                162937 259 +    265003 I
e Monodon_monoceros.MonMon_M_scaffold_5598                 149798   2 +    154973 I
e Mirounga_angustirostris.MirAng_flattened_line_8852        16322   0 -    104932 C
e Miniopterus_schreibersii.MinSch_scaffold_24116            36998 214 +     45743 I
e Miniopterus_natalensis.LDJU01000022.1                   8212509 213 +  10048721 I
e Micronycteris_hirsuta.MicHir_scaffold_37978               24387 274 -     32043 I
e Microgale_talazaci.MicTal_scaffold_34660                  40768   0 -     48017 C
e Mesoplodon_bidens.MesBid_scaffold_96348                    2003   2 -     12939 I
e Mellivora_capensis.MelCap_flattened_line_15433             5726   0 -     87323 C
e Megaderma_lyra.MegLyr_scaffold_3562                       65026   2 -    234502 I
e Manis_pentadactyla.KN017078.1                             39380   0 +     58827 C
e Manis_javanica.JSZB01003966.1                            149232   0 +    252755 C
e Lycaon_pictus.CM007556.1                               11094608   0 +  39895028 C
e Loxodonta_africana.GL010040.1                          20597894   0 -  62548349 C
e Lipotes_vexillifer.KE558548.1                            139369   2 +   3060487 I
e Leptonychotes_weddellii.KB714749.1                      3090826   0 -   3498232 C
e Lasiurus_borealis.LasBor_scaffold_59542                    5042 241 +     26176 I
e Kogia_breviceps.KogBre_flattened_line_35920               26998   2 +     37189 I
e Inia_geoffrensis.IniGeo_flattened_line_66725              12417   2 +     17520 I
e Hyaena_hyaena.HyaHya_flattened_line_20729                 22640   0 -     67322 C
e Hipposideros_galeritus.HipGal_scaffold_52959                377   2 +     26078 I
e Hipposideros_armiger.JXIK01001085.1                      282608   2 -    477199 I
e Hippopotamus_amphibius.HipAmp_scaffold_1308              150208   0 +    277961 C
e Heterohyrax_brucei.HetBruBak_scaffold_13814               68359   0 -    108006 C
e Hemitragus_hylocrius.HemHyl_scaffold_16669                32467   0 -     91191 C
e Helogale_parvula.HelPar_flattened_line_22962              22066   0 +     53719 C
e Giraffa_tippelskirchi.LVKQ01S012154.1                    185599   0 -    189561 C
e Felis_nigripes.FelNig_flattened_line_8080                 26394   0 +     52776 C
e Felis_catus_fca126.CM031420.1                         129285299   0 - 158578461 C
e Eubalaena_japonica.EubJap_flattened_line_7756             64881   0 +     89355 C
e Eschrichtius_robustus.EscRob_flattened_line_685          318424   0 +    330699 C
e Equus_przewalskii.ATBW01073585.1                          16166   0 +     92910 C
e Equus_caballus.CM000402.2                              13354676   0 +  41866177 C
e Equus_asinus.JREZ01000062.1                             5856176   0 -   7175178 C
e Enhydra_lutris.KZ291749.1                              85876835   0 +  99434291 C
e Elephantulus_edwardii.JH947210.1                        7830035 1277 +  15467074 I
e Elaphurus_davidianus.JRFZ01086400.1                     1495795   0 +   1727528 C
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Echinops_telfairi.JH980316.1                           22999931   2 -  44670279 I
e Diceros_bicornis.DicBicMic_scaffold_9545                   6452   0 +    151128 C
e Dicerorhinus_sumatrensis.PEKH010003161.1                 325812   0 +    993696 C
e Desmodus_rotundus.KZ672188.1                           18700517 262 -  18957592 I
e Delphinapterus_leucas.KZ290064.1                       80040207   0 -  96802777 C
e Dasypus_novemcinctus.JH568778.1                          185121 383 -   6883506 I
e Cryptoprocta_ferox.CryFer_flattened_line_19014            56919   0 -     70449 C
e Crocidura_indochinensis.CroInd_scaffold_27484              1226   0 -     22648 C
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1337   2 -      5782 I
e Condylura_cristata.JH655880.1                          60621791   0 +  78930452 C
e Choloepus_hoffmanni.KN194586.1                           763329 503 +    964067 I
e Choloepus_didactylus.ChoDid_scaffold_36182                18024 504 -     21363 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_160623         6920   0 -      9338 C
e Catagonus_wagneri.CatWag_scaffold_1305                   162277   0 -    276539 C
e Carollia_perspicillata.CarPer_scaffold_4436               61226 261 +     67245 I
e Capra_hircus.CM004562.1                               135711414   0 - 157403528 C
e Capra_aegagrus.CM003214.1                              21330197   0 + 157394656 C
e Canis_lupus_orion.HG994411.1                           16461937   0 -  44759192 C
e Canis_lupus_familiaris.chr31                           11095152   0 +  39895921 C
e Canis_lupus_dingo.QKWQ01001993.1                       11272441   0 -  35597290 C
e Canis_lupus_VD.CanFam_VD_scaffold_16982                   20732   0 +     87036 C
e CanFam4.chr31                                          11525758   0 +  39901454 C
e Camelus_ferus.KB016973.1                                2976160   0 +   6889770 C
e Camelus_dromedarius.KN271192.1                           400424   0 -  15254737 C
e Camelus_bactrianus.KN276303.1                           3222722   0 -   8989139 C
e Bubalus_bubalis.KI419065.1                               674242   0 +   1914593 C
e Bos_taurus.CM000177.6                                  22664479   0 + 158972876 C
e Bos_mutus.JH883513.1                                     418090   0 +    998990 C
e Bos_indicus.CM003021.1                                 22955825   0 + 161108492 C
e Bison_bison.KN264915.1                                   301727   0 -   6870073 C
e Beatragus_hunteri.BeaHun_scaffold_21644                   47579   0 -     72089 C
e Balaenoptera_bonaerensis.DF502048.1                        8754   0 -     13118 C
e Balaenoptera_acutorostrata.KI537095.1                  26383581   0 +  51448160 C
e Artibeus_jamaicensis.ArtJam_scaffold_41619                10440 261 -     29036 I
e Antilocapra_americana.AntAmePen_scaffold_27338             2548   0 +     55446 C
e Anoura_caudifer.AnoCau_scaffold_422                      392020 257 -    631301 I
e Ammotragus_lervia.NIVO01013474.1                        3525117   0 +   4113121 C
e Ailurus_fulgens.LNAC01000003.1                          7099380   0 -  16596857 C
e Ailuropoda_melanoleuca.LNAT01000321.1                  10662594   0 +  23371972 C
e Acinonyx_jubatus.LLWD01000356.1                         2038912   0 +   3721120 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           20901   0 -    119109 C
e Glis_glis.GliGli_scaffold_79770                           15993   0 -     18683 C
e Zapus_hudsonius.ZapHud_scaffold_64392                     20218   0 -     20485 C
e Jaculus_jaculus.JH725517.1                              8577088   0 +  11848649 C
e Hylobates_pileatus_a.tarseq_592                             35692  75 -     60944 I
e Allactaga_bullata.AllBul_scaffold_70162                   21404   0 -     22067 C
e Galeopterus_variegatus.GalVar_scaffold_354               159184   0 +    324696 C
e Microtus_ochrogaster.CM001673.1                        22823881   0 -  98408828 C
e Xerus_inauris.XerIna_scaffold_7898                       128400 2868 -    134049 I
e Varecia_variegata.k141_775891                             27530   0 -     33872 C
e Varecia_rubra.k141_432109                                  7995   0 -     20643 C
e Tupaia_tana.TupTan_flattened_line_68454                    9338   0 +     13056 C
e Tupaia_chinensis.KB320831.1                             2797404   0 -   3938065 C
e Tarsius_wallacei.k141_48636                               60532 3805 +     65473 I
e Tarsius_lariang.k141_609102                               27216 3812 +     42269 I
e Spermophilus_dauricus.KZ294190.1                        2243603   0 +   2842873 C
e Sigmodon_hispidus.SigHis_scaffold_11332                  104689   0 -    120886 C
e Rattus_norvegicus.chr11                                13917336   0 +  90463843 C
e Psammomys_obesus.NESX01026517.1                           37921   0 +     77221 C
e Propithecus_verreauxi.k141_158021                         42002   0 -     48185 C
e Propithecus_tattersalli.k141_907138                       19738   0 -     53241 C
e Propithecus_perrieri.k141_7554                            20103   0 +     27322 C
e Propithecus_edwardsi.k141_1317105                         38180   0 -     44753 C
e Propithecus_diadema.k141_577245                           45793   0 +     52369 C
e Propithecus_coronatus.k141_1353159                         6446   0 +     11805 C
e Propithecus_coquerelli.NW_012147863.1                     20390   0 -     30946 C
e Prolemur_simus.MPIZ01000048.1                           6851355   0 +  12164890 C
e Pithecia_vanzolinii.k141_831006                           15424   0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514   0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521   0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292   0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093   0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038   0 +     78826 C
e Pithecia_albicans.k141_991845                             45662   0 -     61926 C
e Peromyscus_maniculatus.KI615518.1                       4955125   0 -   8017169 C
e Perodicticus_potto.k141_1136815                           10207   0 +     61070 C
e Perodicticus_ibeanus.k141_117958                           9080   0 -     23713 C
e Otolemur_garnettii.GL873528.1                          18011493   0 -  38779656 C
e Otolemur_crassicaudatus.k141_505435                        3512   0 -     53940 C
e Onychomys_torridus.OnyTor_scaffold_12578                  42756   0 +     62360 C
e Ondatra_zibethicus.OndZib_scaffold_6821                  130071   0 +    145789 C
e Octodon_degus.JH651621.1                                3687420 1881 +  10294119 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65678347   0 +  89412551 C
e Nycticebus_coucang.k141_771591                            13545   0 +     16181 C
e Nycticebus_bengalensis.LG16                            65570136   0 -  95554990 C
e Nannospalax_galili.KL201303.1                            119867   0 +    362372 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     91920 1922 -    117718 I
e Muscardinus_avellanarius.MusAve_scaffold_9643             14525   0 +     98495 C
e Mus_spretus.CM004110.1                                 74336277   0 +  97876770 C
e Mus_pahari.LT608305.1                                  67559927   0 +  89017189 C
e Mus_musculus.chr16                                     75493550   0 +  98207768 C
e Mus_caroli.LT608236.1                                  70771497   0 +  92629107 C
e Mirza_zaza.k141_593947                                     4089   0 -     12809 C
e Microcebus_murinus.CM007691.1                          16513035   0 +  47401472 C
e Mesocricetus_auratus.KB708139.1                         1051192   0 -  26018355 C
e Meriones_unguiculatus.MerUng_scaffold_52233               15570   0 +     15977 C
e Marmota_marmota.CZRN01000005.1                         36877588   0 +  64221397 C
e Loris_tardigradus.ctg97                                 3781302   0 +   6799190 C
e Loris_lydekkerianus.k141_550999                           13563   0 +     84689 C
e Lepilemur_septentrionalis.k141_710646                      1084   0 -     13103 C
e Lepilemur_ruficaudatus.k141_574529                        35037   0 -     38897 C
e Lepilemur_dorsalis.k141_134267                            56656   0 +     63517 C
e Lepilemur_ankaranensis.k141_884009                        27292   0 +     39228 C
e Lemur_catta.scaffold_1                                258409979   0 - 285822530 C
e Indri_indri.k141_2197838                                    116   0 +      3484 C
e Ictidomys_tridecemlineatus.JH393315.1                   7129728   0 +  13083262 C
e Hystrix_cristata.HysCri_scaffold_50788                     7688 1865 +     22540 I
e Heterocephalus_glaber.JH602058.1                        2560252   0 +  31725842 C
e Hapalemur_occidentalis.k141_797938                        48308   0 -     54384 C
e Hapalemur_meridionalis.k141_186231                        31681   0 -     42470 C
e Hapalemur_griseus.k141_1387522                             8432   0 +     56096 C
e Hapalemur_gilberti.k141_279011                             3105   0 -     11661 C
e Hapalemur_alaotrensis.k141_1280836                         4627   0 +     10286 C
e Graphiurus_murinus.GraMur_scaffold_4493                   79386   0 +    118900 C
e Galagoides_demidoff.k141_1769638                          13144   0 +     27357 C
e Galago_senegalensis.k141_964197                           16038   0 -     43889 C
e Galago_moholi.ctg555                                     213680   0 -    847004 C
e Fukomys_damarensis.KN123630.1                          13895732   0 -  19261668 C
e Eulemur_sanfordi.k141_186399                              18623   0 -     29447 C
e Eulemur_rufus.k141_1620292                                35891   0 +     46535 C
e Eulemur_rubriventer.k141_411740                           21157   0 +     26808 C
e Eulemur_mongoz.k141_825972                                18693   0 +     27497 C
e Eulemur_macaco.k141_747087                                 2027   0 -     19505 C
e Eulemur_fulvus.k141_653297                                14043   0 +    109717 C
e Eulemur_flavifrons.k141_903901                            10560   0 +     60246 C
e Eulemur_coronatus.k141_3240342                            14235   0 +     36558 C
e Eulemur_collaris.k141_1015201                              1102   0 -      4292 C
e Eulemur_albifrons.k141_715837                              7832   0 +     13586 C
e Ellobius_talpinus.LOJH01198462.1                           1213   0 -      1901 C
e Ellobius_lutescens.LOEQ01003611.1                        243471   0 -    369425 C
e Dolichotis_patagonum.DolPat_scaffold_14102                39604   0 -     73477 C
e Daubentonia_madagascariensis.ctg11                     16847687   0 +  31942871 C
e Dasyprocta_punctata.DasPun_flattened_line_634             61584   0 -    236241 C
e Cuniculus_paca.CunPac_flattened_line_16637                20446   0 +     26546 C
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 32592 1717 -     67205 I
e Ctenodactylus_gundi.CteGun_scaffold_447                  213664   0 -    956709 C
e Cricetulus_griseus.LT883672.1                          53034667   0 +  72327488 C
e Cricetomys_gambianus.CriGam_scaffold_949                 282297   0 -    399297 C
e Chinchilla_lanigera.JH721867.1                         15963245 964 +  43084221 I
e Cheirogaleus_medius.k141_133808                           10871   0 +     13308 C
e Cheirogaleus_major.k141_1157592                           61827   0 -     68416 C
e Cephalopachus_bancanus.k141_702587                         8788 3391 +     21754 I
e Cavia_tschudii.CavTsc_scaffold_488                       177725 1742 +    436027 I
e Cavia_porcellus.DS562889.1                             15799553 1742 -  24440124 I
e Cavia_aperea.AVPZ01000278.1                            15787615 1741 -  24422027 I
e Carlito_syrichta.NW_007248099.1                          309764 3411 +    345090 I
e Avahi_peyrierasi.k141_798820                               3156   0 +      6337 C
e Avahi_laniger.k141_2840928                                 9540   0 -     16375 C
e Arctocebus_calabarensis.k141_587554                        4710   0 +      9265 C
e Acomys_cahirinus.AcoCah_scaffold_1625                    117433   0 -    189883 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               16299 45 +    209709 AGGCAATTTTG-----------------AGGCACACAGTAGTTAGCACAACTGGTCTAGTGT
s Allenopithecus_nigroviridis.k141_2469532                   4022 45 -     60446 aggcaattttg-----------------aggcatacagtagttagcacaactgGCCTAGGGT
i Allenopithecus_nigroviridis.k141_2469532              I 24 C 0
s Allochrocebus_lhoesti.k141_3566948                         4740 45 -     29318 aggtaattttg-----------------aggcatacagtagttagcacaactgGTCTAGGGT
i Allochrocebus_lhoesti.k141_3566948                    I 24 C 0
s Allochrocebus_preussi.k141_1108977                         3678 45 +     38766 aggcaattttg-----------------aggcatacagtagttagcacaactgGTCTAGGGT
i Allochrocebus_preussi.k141_1108977                    I 24 C 0
s Allochrocebus_solatus.k141_371672                          4634 45 -     80423 aggtaattttg-----------------aggcatacagtagttagcacaactgGTCTAGGGT
i Allochrocebus_solatus.k141_371672                     I 24 C 0
s Alouatta_belzebul.k141_165776                             15987 45 +     19426 aggcaattttg-----------------aggcacacagtagttagcaccactggtctaggtt
i Alouatta_belzebul.k141_165776                         C 0 C 0
s Alouatta_caraya.k141_664908                                1539 45 -     12443 aggcaattttg-----------------aggcacacagtagttagcaccactggtctaggtt
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2476351                             1262 45 +     41985 aggcaattttg-----------------aggcacacagtagttagcaccactggtctagatt
i Alouatta_discolor.k141_2476351                        C 0 C 0
s Alouatta_juara.k141_2534995                                3016 45 +      4011 aggcaattttg-----------------aggcacacagtagttagcaccactggtctaggtt
i Alouatta_juara.k141_2534995                           C 0 C 0
s Alouatta_macconnelli.k141_2318944                          1338 45 -     24210 aggcaattttg-----------------aggcacacagtagttagcaccactggtctaggtt
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           27920 45 -     30219 aggcaattttg-----------------aggcacacagtagttagcaccactggtctaggtt
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_564633                              1349 45 -      1511 aggcaattttg-----------------aggcacacaatagttagcaccactggtctaggtt
i Alouatta_palliata.k141_564633                         I 363 N 0
s Alouatta_puruensis.k141_398195                            44110 45 +     45367 aggcaattttg-----------------aggcacacagtagttagcaccactggtctaggtt
i Alouatta_puruensis.k141_398195                        C 0 C 0
s Alouatta_seniculus.k141_790278                             3029 45 -      9835 aggcaattttg-----------------aggcacacagtagttagcaccactggtctaggtt
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Aotus_azarae.k141_3170768                                 64968 45 +     78111 aggcaattttg-----------------aggcacacagtagttagcaccactggtctaggtt
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            7919 45 +     22701 aggcaattttg-----------------aggcacacagtagttagcaccactggtctaggtt
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5751872 45 +   9889416 AGGCAATTTTG-----------------AGGCACACAGTAGTTAGCACCACTGGTCTAGGTT
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             8465 45 -    104377 aggcaattctg-----------------aggcacacagtagttagcaccactggtctaggtt
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               8467 45 +     23246 aggcaattctg-----------------aggcacacagtagttagcaccactggtctaggtt
i Aotus_vociferans.k141_718647                          C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9541727 45 +  39197703 aggcaattttg-----------------aggcacacagtagttaccaccactggtctaggtt
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             63000 45 +     85812 aggcaattttg-----------------aggcacacagtagttaccaccactggtctaggtt
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                14013 45 +     89302 aggcaattttg-----------------aggcacacagtagttaccaccactggtctaggtt
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             18514 45 -     58268 aggcaattttg-----------------aggcacacagtagttaccaccactggtctaggtt
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             66508 45 +    119057 aggcaattttg-----------------aggcacacagtagttaccaccactggtctaggtt
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               8477 45 -     25888 aggcaattttg-----------------aggcacacagtagttaccaccactggtctaggtt
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Cacajao_ayresi.k141_724503                               116377 45 -    171031 aggcaattttg-----------------aggcatacaatagttagccccactggtctaggtt
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 15402 45 +    125063 aggcaattttg-----------------aggcatacaatagttagccccactggtctaggtt
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                17449 45 -    216513 aggcaattttg-----------------aggcatacaatagttagccccactggtctaggtt
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                        9992 45 -    134917 aggcaattttg-----------------aggcatacaatagttagccccactggtctaggtt
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Cebus_albifrons.Contig22                               18893214 45 -  29618158 aggcaattttg-----------------aggcacacagttgttagcaccactggtctaggtt
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                10758 45 -     26817 aggcaattttg-----------------aggcacacagttgttagcaccactggtctaggtt
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                15001 45 +     25043 aggcaattttg-----------------aggcacacagttgttagcaccactggtctaggtt
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cercocebus_atys.KQ010443.1                              6557963 45 +   6739814 AGGCAATTTTG-----------------AGGCACACAGTAGTTAGCACAACTGGTTTAGGGT
i Cercocebus_atys.KQ010443.1                            I 24 C 0
s Cercocebus_chrysogaster.k141_2328246                      29440 45 +     60454 aggcaattttg-----------------aggcacacagtagttagcacaactgGTTTAGGGT
i Cercocebus_chrysogaster.k141_2328246                  I 24 C 0
s Cercocebus_lunulatus.k141_4634644                          4644 45 -     21101 aggcaattttg-----------------aggcacacagtagttagcacaactgGTTTAGGGT
i Cercocebus_lunulatus.k141_4634644                     I 24 C 0
s Cercocebus_torquatus.k141_3969582                         61954 45 -    107033 aggcaattttg-----------------aggcacacagtagttagcacaactgGTTTAGGGT
i Cercocebus_torquatus.k141_3969582                     I 24 C 0
s Cercopithecus_ascanius.k141_4123525                        4837 45 -     17608 aggcaattttg-----------------aggcatacagtagttagcacaactgGTCTAGGGT
i Cercopithecus_ascanius.k141_4123525                   I 24 C 0
s Cercopithecus_cephus.k141_3893260                          2001 45 +     45019 aggcaattttg-----------------aggcatacagtagttagcacaactgGTCTAGGGT
i Cercopithecus_cephus.k141_3893260                     I 24 C 0
s Cercopithecus_diana.k141_2561715                           2067 45 +     15177 aggcaattttg-----------------aggcatacagtagttagcacaactgGTCTAGGGT
i Cercopithecus_diana.k141_2561715                      I 24 C 0
s Cercopithecus_hamlyni.k141_129805                          4885 45 +     16677 aggcaattttg-----------------aggcatacagtagttagcacaactgGTCTAGGGT
i Cercopithecus_hamlyni.k141_129805                     I 24 C 0
s Cercopithecus_lowei.k141_623764                           27052 45 +     35983 aggcaattttg-----------------aggcatacagtagttagcacaactgGTCTAGGGT
i Cercopithecus_lowei.k141_623764                       I 24 C 0
s Cercopithecus_albogularis.ctg51                              11993583 45 +  12117833 aggcaattttg-----------------aggcatacagtagttagcacaactgGTCTAGGGT
i Cercopithecus_albogularis.ctg51                             I 24 C 0
s Cercopithecus_mona.ctg12                               46480341 45 +  46592721 aggcaattttg-----------------aggcatacagtagttagcacaactgGTCTAGGGT
i Cercopithecus_mona.ctg12                              I 24 C 0
s Cercopithecus_neglectus.k141_2078027                      43895 45 -     45581 aggcaattttg-----------------aggcatacagaacttagcacaactgGTCTAGGGT
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       4897 45 +     35577 aggcaattttg-----------------aggcatacagtagttagcacaactgGTCTAGGGT
i Cercopithecus_nictitans.k141_1129315                  I 24 C 0
s Cercopithecus_petaurista.k141_64532                        4670 45 -     25661 aggcaattttg-----------------aggcatacagtagttagcacaactgGTCTAGAGT
i Cercopithecus_petaurista.k141_64532                   I 24 C 0
s Cercopithecus_pogonias.k141_3109732                        4649 45 -     17744 aggcaattttg-----------------aggcatacagtagttagcacaactgGTCTAGGGT
i Cercopithecus_pogonias.k141_3109732                   I 24 C 0
s Cercopithecus_roloway.k141_2263608                        24233 45 +     37128 aggcaattttg-----------------aggcatacagtagttagcacaactgGTCTAGGGT
i Cercopithecus_roloway.k141_2263608                    I 24 C 0
s Cheracebus_lucifer.k141_619653                             8035 45 -     18223 aggcaattttg-----------------aggcacacagtagttagccccactgGTCTAGGTT
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             25053 45 +     25473 aggcaattttg-----------------aggcacacagtagttagccccactgGTCTAGGTT
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           44093 45 +     57117 aggcaattttg-----------------aggcacacagtagttagccccactgGTCTAGGTT
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          48772 45 +     54541 aggcaattttg-----------------aggcacacagtagttagccccactgGTCTAGGTT
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chiropotes_israelita.k141_1189915                         73573 45 +    196370 aggcaattttg-----------------aggcatacaatagttagccccactggtctaggtt
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          17754 45 +     40510 aggcaattttg-----------------aggcatacaatagttagccccactggtctaggtt
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15142252 45 -  15256731 aggcaattttg-----------------aggcatacAGTAGTTGGCACAACTGGTCTAGGGT
i Chlorocebus_aethiops.ctg22                            I 24 C 0
s Chlorocebus_pygerythrus.k141_1486215                      36861 45 -     53260 aggcaattttg-----------------aggcatacAGTAGTTGGCACAACTGGTCTAGGGT
i Chlorocebus_pygerythrus.k141_1486215                  I 24 C 0
s Chlorocebus_sabaeus.CM001963.2                        101147420 45 + 101219884 AGGCAATTTTG-----------------AGGCATACAGTAGTTAGCACAACTGGTCTAGGGT
i Chlorocebus_sabaeus.CM001963.2                        I 24 C 0
s Colobus_angolensis.KN985967.1                          10889401 22 +  10971483 AGGCAATTTTG-----------------AGGCACACAGT-----------------------
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147667329 22 + 156195979 aggcaattttg-----------------aggcacacAGT-----------------------
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            19313 22 +     23629 aggcaattttg-----------------aggcaGACAGT-----------------------
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Erythrocebus_patas.Contig8                             48779431 45 -  48907691 aggcaattttg-----------------aggcatacagtagttagcacaactgGTCTAGGGT
i Erythrocebus_patas.Contig8                            I 24 C 0
s Gorilla_beringei.k141_111300                               8013 45 -     14630 aggcaatttta-----------------aggcacacagtagttagcacaactggtctagggt
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119655113 45 - 195582420 aggcaatttta-----------------aggcacacagtagttagcacaactgGTCTAGGGT
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Hoolock_leuconedys.ctg649                                   106475 45 +    115816 aggcaattttg-----------------aggcacacagtagttagcacaactggtctagggt
i Hoolock_leuconedys.ctg649                                I 1157 I 1943
s Hylobates_abbotti.k141_1816750                              537 45 +      3202 aggcaattttg-----------------aggcacacagtagttagcacaactgttctagggt
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1633646                               507 45 -      2102 aggcaattttg-----------------gggcacacAGTACTTAGCACAACTGGTCTAGGGT
i Hylobates_agilis.k141_1633646                         C 0 C 0
s Hylobates_klossii.k141_468230                              2023 45 +      5464 aggcacttttg-----------------aggcacacagtagttagcacaactggtctagggt
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14627372 45 -  25970782 aggcaattttg-----------------aggcacacagtagttagcacaactggtctagggt
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Lagothrix_lagothricha.k141_12968                          52600 45 -    147782 aggcaattttg-----------------aggcacacagtagttaccaccactggtctaggtt
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lophocebus_aterrimus.ctg55                             19251051 45 +  19376315 aggcaattttg-----------------aggcacacagtagttagcacaactgGTTTAGGGT
i Lophocebus_aterrimus.ctg55                            I 24 C 0
s Macaca_arctoides.k141_2201161                             22802 45 +     74745 aggcaattttg-----------------aggcacacAGTAGTTAGCACAACCGGTCTAGGGT
i Macaca_arctoides.k141_2201161                         I 24 C 0
s Macaca_assamensis.Contig65                             12709263 45 +  12821369 aggcaattttg-----------------aggcacacAGTAGTTAGCACAACCGGTCTAGGGT
i Macaca_assamensis.Contig65                            I 24 C 0
s Macaca_cyclopis.k119_883699                                1837 45 -     26467 aggcaattttg-----------------aggcacacagtagttAGCACAACCGGTCTAGGGT
i Macaca_cyclopis.k119_883699                           I 24 C 0
s Macaca_fascicularis.k141_155037                           49708 45 +     63263 aggcaattttg-----------------aggcacacAGTAGTTAGCACAACCGGTCTAGGGT
i Macaca_fascicularis.k141_155037                       I 24 C 0
s Macaca_fuscata.k119_938422                                 1818 45 -     26361 aggcaattttg-----------------aggcacacagtagttAGCACAACCGGTCTAGGGT
i Macaca_fuscata.k119_938422                            I 24 C 0
s Macaca_leonina.k141_467472                                 4995 45 -      7381 aggcaattttg-----------------aggcacacagtagttAGCACAACCGGTCTAGGGT
i Macaca_leonina.k141_467472                            I 24 C 0
s Macaca_maura.k141_251854                                  48233 45 -     79256 aggcaattttg-----------------aggcacacAGTAGTTAGCACAACCGGTCTAGGGT
i Macaca_maura.k141_251854                              I 24 C 0
s Macaca_mulatta.NC_041755.1                            196038335 45 + 196197964 AGGCAATTTTG-----------------AGGCACACAGTAGTTAGCACAACCGGTCTAGGGT
i Macaca_mulatta.NC_041755.1                            I 24 C 0
s Macaca_nemestrina.KQ004885.1                           11448501 45 +  11645122 AGGCAATTTTG-----------------AGGCACACAGTAGTTAGCACAACCGGTCTAGGGT
i Macaca_nemestrina.KQ004885.1                          I 24 C 0
s Macaca_nigra.k141_282495                                   7187 45 -     46448 aggcaattttg-----------------aggcacacagtagttAGCACAACCGGTCTAGGGT
i Macaca_nigra.k141_282495                              I 24 C 0
s Macaca_radiata.k141_3680256                                4853 45 -     13212 aggcaattttg-----------------aggcacacagtagttAGCACAACCGGTCTAGGGT
i Macaca_radiata.k141_3680256                           I 24 C 0
s Macaca_siberu.k141_741907                                 18530 45 -     55006 aggcaattttg-----------------aggcacacAGTAGTTAGCACAACCGGTCTAGGGT
i Macaca_siberu.k141_741907                             I 24 C 0
s Macaca_silenus.Contig12                                43843636 45 +  43892939 aggcaattttg-----------------aggcacacAGTAGTTAGCACAACCGGTCTAGGGT
i Macaca_silenus.Contig12                               I 24 C 0
s Macaca_thibetana.k99_662710                               19817 45 -     24607 aggcaattttg-----------------aggcacacagtagttAGCACAACCGGTCTAGGGT
i Macaca_thibetana.k99_662710                           I 24 C 0
s Macaca_tonkeana.k141_2870633                               7184 45 -     27140 aggcaattttg-----------------aggcacacagtagttAGCACAACCGGTCTAGGGT
i Macaca_tonkeana.k141_2870633                          I 24 C 0
s Mandrillus_leucophaeus.scaffold125                     43440216 45 -  43563597 aggcaattttg-----------------aggcacacagtagttagcacaactgGTTTAGGGT
i Mandrillus_leucophaeus.scaffold125                    I 24 C 0
s Mandrillus_sphinx.Contig144                             4453031 45 -   4543643 aggcaattttg-----------------aggcacacagtagttagcacaactgGTTTAGGGT
i Mandrillus_sphinx.Contig144                           I 24 C 0
s Miopithecus_ogouensis.k141_2935907                         4770 45 +     29742 aggcaattttg-----------------aggcatacagtagttagcacaactgGTCTAGGGT
i Miopithecus_ogouensis.k141_2935907                    I 24 C 0
s Nasalis_larvatus.k141_153429                              11242 22 +     48152 aggcaattttg-----------------aggcacacagt-----------------------
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Nomascus_annamensis.k141_224620                            1838 45 -      2316 aggcaattttg-----------------aggcacacagtagttagcacaactgGTCTAGGGT
i Nomascus_annamensis.k141_224620                       C 0 C 0
s Nomascus_concolor.k141_226614                              3935 45 -      5092 aggcaattttg-----------------aggcacacagtagttagcacaactgGTCTAGGGT
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_1032971                           1505 45 -      1918 aggcaattttg-----------------aggcacacagtagttagcacaactggtctagggt
i Nomascus_gabriellae.k141_1032971                      C 0 C 0
s Nomascus_siki_b.tarseq_80                             27687 45 -  18771707 aggcaattttg-----------------aggcacacagtagttagcacaactggtctagggt
i Nomascus_siki_b.tarseq_80                         I 365 C 0
s Nomascus_siki_a.k141_1035055                                 2248 45 -      3602 aggcaattttg-----------------aggcacacagtagttagcacaactgGTCTAGGGT
i Nomascus_siki_a.k141_1035055                            C 0 C 0
s Pan_paniscus.CM003386.1                               127577375 45 - 205426864 AGGCAATTTTG-----------------AGGCACACAGTAGTTAGCACAACTGGTCTAGGGT
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120154535 45 - 196562556 AGGCAATTTTG-----------------AGGCACACAGTAGTTAGCACAACTGGTCTAGGGT
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Papio_anubis.CM001492.2                               188159013 45 - 188283584 AGGCAATTTTG-----------------AGGCACACAGTAGTTAGCACAACTGGTTTAGGGT
i Papio_anubis.CM001492.2                               I 24 C 0
s Papio_cynocephalus.k141_45376                              2103 45 +     25005 aggcaattttg-----------------aggcacacagtagttagcacaactgGTTTAGGGT
i Papio_cynocephalus.k141_45376                         I 24 C 0
s Papio_hamadryas.Contig15                               47516385 45 +  47705337 aggcaattttg-----------------aggcacacagtagttagcacaactgGTTTAGGGT
i Papio_hamadryas.Contig15                              I 24 C 0
s Papio_kindae.k141_5458022                                 70376 45 -    104429 aggcaattttg-----------------aggcacacagtagtttgCACAACTGGTTTAGGGT
i Papio_kindae.k141_5458022                             I 24 C 0
s Papio_papio.k141_979496                                    8908 45 +     14967 aggcaattttg-----------------aggcacacagtagttagcacaactgGTTTAGGGT
i Papio_papio.k141_979496                               I 24 C 0
s Papio_ursinus.k141_1345919                                 4773 45 -      7628 aggcaattttg-----------------aggcacacagtagttagcacaactgGTTTAGGGT
i Papio_ursinus.k141_1345919                            I 24 C 0
s Piliocolobus_badius.k141_1987485                           4780 22 -      5908 aggcaattttg-----------------cggcacacagt-----------------------
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       5399 22 -     17985 aggcaattttg-----------------cagcacacagt-----------------------
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            4766 22 +      7694 aggcaattttg-----------------cagcacacagt-----------------------
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26743249 22 +  26888534 AGGCAATTTTG-----------------CGGCACACAGT-----------------------
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pongo_abelii.NDHI03003816.1                              189894 45 -    373494 AGGCAATTTTG-----------------AGGCACACAGTAGTTAGCACAACTGGTCTAGGGT
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19810541 45 +  19899266 aggcaattttg-----------------aggcacacagtagttagcacaactggtctagggt
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               8524 22 -     15069 aggcaattttg-----------------aggcacacagt-----------------------
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              8639 22 +     14865 aggcaattttg-----------------aggcacacagt-----------------------
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Pygathrix_cinerea.k141_374971                             32629 22 +     56732 aggcaattttg-----------------aggcacacagt-----------------------
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6809126 22 +   6970761 aggcaattttg-----------------aggcacacAGT-----------------------
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             8515 22 +     18040 aggcaattttg-----------------aggcacacagt-----------------------
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rhinopithecus_bieti.k119_554384                            2895 22 -     17045 aggcaattttg-----------------aggcacacagt-----------------------
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206380382 22 - 206558726 AGGCAATTTTG-----------------AGGCACACAGT-----------------------
i Rhinopithecus_roxellana.NC_044549.1                   C 0 N 0
s Rhinopithecus_strykeri.ctg4                            44859285 22 -  45163003 aggcaattttg-----------------aggcacacAGT-----------------------
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15675166 45 -  43202129 AGGCAATTTTG-----------------AGGCACACAGTAGTTAGCACCACTGGTCTAGGTT
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        7079 45 +     34089 aggcaattttg-----------------aggcacacagtagttagcaccactgGTCTAGgtt
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              7021 45 -     60842 aggcaattttg-----------------aggcacacagtagttagcaccactgGTCTAGgtt
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              7114 45 +     67014 aggcaattttg-----------------aggcacacagtagttagcaccactgGTCTAGgtt
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              7092 45 +     60816 aggcaattttg-----------------aggcacacagtagttagcaccactgGTCTAGgtt
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 7029 45 -     76454 aggcaattttg-----------------aggcacacagtagttagcaccactgGTCTAGgtt
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17343760 45 -  30362882 aggcaattttg-----------------aggcacacagtagttagcaccactggtctaggtt
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         23121 45 -     62485 aggcaattttg-----------------aggcacacagtagttagcaccactggtctaggtt
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Semnopithecus_entellus.k141_1572367                        6131 22 +     15331 aggcaattttg-----------------aggcacacagt-----------------------
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      11506 22 +     20762 aggcaattttg-----------------aggcacacagt-----------------------
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         121510 22 +    130994 aggcaattttg-----------------aggcacacAGT-----------------------
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           40290 22 +     46263 aggcaattttg-----------------aggcacacagt-----------------------
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     33435 22 +     42640 aggcaattttg-----------------aggcacacagt-----------------------
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        16457 22 +     30600 aggcaattttg-----------------aggcacacagt-----------------------
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        17632 45 -  13920577 aggcaattttg-----------------aggcacacagtagttagcacaactggtctagggt
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Theropithecus_gelada.CM009951.1                       194010545 45 - 194193292 AGGCAATCTTG-----------------AGGCACACAGTAGTTAGCACAACTGGTTTAGGGT
i Theropithecus_gelada.CM009951.1                       I 24 C 0
s Trachypithecus_auratus.k141_738098                        29778 22 +     38948 aggcaattttg-----------------aggcacacagt-----------------------
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   23338 22 -     32910 aggcaattttg-----------------aggcacacagt-----------------------
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      5239 22 -     12939 aggcaattttg-----------------aggcacacagt-----------------------
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       4667 22 -     14244 aggcaatttcg-----------------aggcacacagt-----------------------
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           46060 22 -     54611 aggcaattttg-----------------aggcacacagt-----------------------
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        3861 22 -     11566 aggcaattttg-----------------aggcacacagt-----------------------
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     6045 22 -     15592 aggcaatttcg-----------------aggcacacagt-----------------------
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          4697 22 +     14371 aggcaatttcg-----------------aggcacacagt-----------------------
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   2983 22 +     12481 aggcaatttcg-----------------aggcacacagt-----------------------
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        2964 22 -     24393 aggcaattttg-----------------aggcacacagt-----------------------
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       8108 22 -     28054 aggcaattttg-----------------aggcacacagt-----------------------
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44662892 22 -  44834318 aggcaattttg-----------------aggcacacAGT-----------------------
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       5204 22 +     13828 aggcaattttg-----------------aggcacacagt-----------------------
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
e Eptesicus_fuscus.JH977687.1                             4708429 237 +   6522550 I
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Petromus_typicus.PetTyp_scaffold_33007                    16921  0 -     36578 C
e Sorex_araneus.JH798170.1                               17769647  0 -  27805282 C
e Dinomys_branickii.DinBra_scaffold_1996                   158442 1030 +    228994 I
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           4051 456 -      6963 I
e Oryctolagus_cuniculus.CM000803.1                      141878516 2929 + 163896628 I
e Ochotona_princeps.JH802095.1                            4996729 2205 -  23139505 I
e Lepus_americanus.LepAme_scaffold_62849                    15480 2946 +     22452 I
e Perognathus_longimembris.PerPac_flattened_line_19359       1614 38 +     49596 I
e Dipodomys_stephensi.DipSte_scaffold_84338                  1789 28 -     11986 I
e Dipodomys_ordii.KN672545.1                              3659429 30 +   4240102 I
e Suricata_suricatta.SurSur_flattened_line_20339            32401  0 +     62062 C
e Ziphius_cavirostris.ZipCav_flattened_line_60625            1538  2 -     13665 I
e Zalophus_californianus.ZalCal_flattened_line_4097        219280  0 -    227762 C
e Vulpes_lagopus.VulLag_flattened_line_2045                143835  0 -    281493 C
e Vicugna_pacos.KN269600.1                                1527832  0 -   2331223 C
e Ursus_maritimus.KK498671.1                              6519892  0 +  28682327 C
e Uropsilus_gracilis.UroGra_scaffold_69449                   9768  0 +     10241 C
e Tursiops_truncatus.MRVK01000923.1                      69316794  2 -  96451834 I
e Trichechus_manatus.JH594618.1                          16088878  0 +  31416278 C
e Tragulus_javanicus.TraJav_scaffold_14717                   9149  2 +     90398 I
e Tonatia_saurophila.TonSau_scaffold_3334                  137563 275 -    259118 I
e Tapirus_terrestris.TapTer_scaffold_14939                  61041  0 +     99546 C
e Tapirus_indicus.TapInd_scaffold_176                      810399  0 +   1148477 C
e Tamandua_tetradactyla.TamTet_scaffold_26877               16259 379 +     45698 I
e Tadarida_brasiliensis.TadBra_scaffold_61492                1822 242 +     20549 I
e Sus_scrofa.CM000824.4                                 189273670 1086 + 218635234 I
e Spilogale_gracilis.SpiGra_flattened_line_905             238244  0 -    276980 C
e Solenodon_paradoxus.SolPar_flattened_line_1012            23185  0 +    739146 C
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   39231  0 -    114521 C
e Saiga_tatarica.SaiTat_scaffold_1069354                      105  0 -       709 C
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Rhinolophus_sinicus.LVEH01000179.1                      1792212  2 +   2252614 I
e Rangifer_tarandus.RanTarSib_scaffold_24239                20109  0 +     68503 C
e Puma_concolor.QAVW01000427.1                          131539433  0 - 161321710 C
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Pteronura_brasiliensis.PteBra_flattened_line_1343        249686  0 -    344369 C
e Pteronotus_parnellii.KE867983.1                            5588 252 -     27784 I
e Procavia_capensis.ProCapCap_scaffold_11797                50321  0 -     88779 C
e Platanista_gangetica.PlaMin_flattened_line_72990           8998  2 +     21690 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Phocoena_phocoena.PhoPho_flattened_line_53071              2530  2 +      8220 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    120818  0 -    135482 C
e Pantholops_hodgsonii.KE114631.1                         1071126  0 -   1292953 C
e Panthera_tigris.KE721879.1                              5032785  0 -   6340057 C
e Panthera_pardus.KV860323.1                              3643137  0 +  18214204 C
e Panthera_onca.PanOnc_flattened_line_1615                  39322  0 +    295523 C
e Ovis_canadensis.OviCan_scaffold_6251                      83485  0 +    140051 C
e Ovis_aries.CM001582.2                                 134082257  0 - 275406953 C
e Otocyon_megalotis.JAEUCK010005121.1                      314612  0 -    505867 C
e Orycteropus_afer.OryAfe_flattened_line_13509              63439  0 -     66828 C
e Orcinus_orca.KB316965.1                                 7228065  2 -   7562323 I
e Okapia_johnstoni.LVCL01S0017931.1                         41334  0 +     78940 C
e Odocoileus_virginianus.KZ101650.1                       1083245  0 +   1425656 C
e Odobenus_rosmarus.KB229369.1                             684428  0 -   3126709 C
e Nyctereutes_procyonoides.CAJHUB010000786.1                37467  0 +   3668941 C
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Neophocaena_asiaeorientalis.KZ688543.1                  3954389  2 -   4490290 I
e Neomonachus_schauinslandi.NINY01007774.1                4489721  0 -  14209539 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             6589 379 -      8794 I
e Myotis_myotis.MyoMyo_scaffold_6123                        13515 236 +     66751 I
e Myotis_lucifugus.GL429887.1                             3468272 238 -   3747815 I
e Myotis_davidii.KB114863.1                               5022194 233 +   6462685 I
e Myotis_brandtii.KE161952.1                               970769 237 +   8389877 I
e Mustela_putorius.JH417978.1                             4427567  0 -  28371801 C
e Murina_feae.MurFea_scaffold_2254                          23900 236 -    100666 I
e Mungos_mungo.MunMun_flattened_line_8729                  149746  0 -    168139 C
e Moschus_moschiferus.MosMos_scaffold_78805                  5813  0 -     19904 C
e Mormoops_blainvillei.MorMeg_scaffold_2952                162937 259 +    265003 I
e Monodon_monoceros.MonMon_M_scaffold_5598                 149798  2 +    154973 I
e Mirounga_angustirostris.MirAng_flattened_line_8852        16322  0 -    104932 C
e Miniopterus_schreibersii.MinSch_scaffold_24116            36998 214 +     45743 I
e Miniopterus_natalensis.LDJU01000022.1                   8212509 213 +  10048721 I
e Micronycteris_hirsuta.MicHir_scaffold_37978               24387 274 -     32043 I
e Microgale_talazaci.MicTal_scaffold_34660                  40768  0 -     48017 C
e Mesoplodon_bidens.MesBid_scaffold_96348                    2003  2 -     12939 I
e Mellivora_capensis.MelCap_flattened_line_15433             5726  0 -     87323 C
e Megaderma_lyra.MegLyr_scaffold_3562                       65026  2 -    234502 I
e Manis_pentadactyla.KN017078.1                             39380  0 +     58827 C
e Manis_javanica.JSZB01003966.1                            149232  0 +    252755 C
e Lycaon_pictus.CM007556.1                               11094608  0 +  39895028 C
e Loxodonta_africana.GL010040.1                          20597894  0 -  62548349 C
e Lipotes_vexillifer.KE558548.1                            139369  2 +   3060487 I
e Leptonychotes_weddellii.KB714749.1                      3090826  0 -   3498232 C
e Lasiurus_borealis.LasBor_scaffold_59542                    5042 241 +     26176 I
e Kogia_breviceps.KogBre_flattened_line_35920               26998  2 +     37189 I
e Inia_geoffrensis.IniGeo_flattened_line_66725              12417  2 +     17520 I
e Hyaena_hyaena.HyaHya_flattened_line_20729                 22640  0 -     67322 C
e Hipposideros_galeritus.HipGal_scaffold_52959                377  2 +     26078 I
e Hipposideros_armiger.JXIK01001085.1                      282608  2 -    477199 I
e Hippopotamus_amphibius.HipAmp_scaffold_1308              150208  0 +    277961 C
e Heterohyrax_brucei.HetBruBak_scaffold_13814               68359  0 -    108006 C
e Hemitragus_hylocrius.HemHyl_scaffold_16669                32467  0 -     91191 C
e Helogale_parvula.HelPar_flattened_line_22962              22066  0 +     53719 C
e Giraffa_tippelskirchi.LVKQ01S012154.1                    185599  0 -    189561 C
e Felis_nigripes.FelNig_flattened_line_8080                 26394  0 +     52776 C
e Felis_catus_fca126.CM031420.1                         129285299  0 - 158578461 C
e Eubalaena_japonica.EubJap_flattened_line_7756             64881  0 +     89355 C
e Eschrichtius_robustus.EscRob_flattened_line_685          318424  0 +    330699 C
e Equus_przewalskii.ATBW01073585.1                          16166  0 +     92910 C
e Equus_caballus.CM000402.2                              13354676  0 +  41866177 C
e Equus_asinus.JREZ01000062.1                             5856176  0 -   7175178 C
e Enhydra_lutris.KZ291749.1                              85876835  0 +  99434291 C
e Elephantulus_edwardii.JH947210.1                        7830035 1277 +  15467074 I
e Elaphurus_davidianus.JRFZ01086400.1                     1495795  0 +   1727528 C
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Echinops_telfairi.JH980316.1                           22999931  2 -  44670279 I
e Diceros_bicornis.DicBicMic_scaffold_9545                   6452  0 +    151128 C
e Dicerorhinus_sumatrensis.PEKH010003161.1                 325812  0 +    993696 C
e Desmodus_rotundus.KZ672188.1                           18700517 262 -  18957592 I
e Delphinapterus_leucas.KZ290064.1                       80040207  0 -  96802777 C
e Dasypus_novemcinctus.JH568778.1                          185121 383 -   6883506 I
e Cryptoprocta_ferox.CryFer_flattened_line_19014            56919  0 -     70449 C
e Crocidura_indochinensis.CroInd_scaffold_27484              1226  0 -     22648 C
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1337  2 -      5782 I
e Condylura_cristata.JH655880.1                          60621791  0 +  78930452 C
e Choloepus_hoffmanni.KN194586.1                           763329 503 +    964067 I
e Choloepus_didactylus.ChoDid_scaffold_36182                18024 504 -     21363 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_160623         6920  0 -      9338 C
e Catagonus_wagneri.CatWag_scaffold_1305                   162277  0 -    276539 C
e Carollia_perspicillata.CarPer_scaffold_4436               61226 261 +     67245 I
e Capra_hircus.CM004562.1                               135711414  0 - 157403528 C
e Capra_aegagrus.CM003214.1                              21330197  0 + 157394656 C
e Canis_lupus_orion.HG994411.1                           16461937  0 -  44759192 C
e Canis_lupus_familiaris.chr31                           11095152  0 +  39895921 C
e Canis_lupus_dingo.QKWQ01001993.1                       11272441  0 -  35597290 C
e Canis_lupus_VD.CanFam_VD_scaffold_16982                   20732  0 +     87036 C
e CanFam4.chr31                                          11525758  0 +  39901454 C
e Camelus_ferus.KB016973.1                                2976160  0 +   6889770 C
e Camelus_dromedarius.KN271192.1                           400424  0 -  15254737 C
e Camelus_bactrianus.KN276303.1                           3222722  0 -   8989139 C
e Bubalus_bubalis.KI419065.1                               674242  0 +   1914593 C
e Bos_taurus.CM000177.6                                  22664479  0 + 158972876 C
e Bos_mutus.JH883513.1                                     418090  0 +    998990 C
e Bos_indicus.CM003021.1                                 22955825  0 + 161108492 C
e Bison_bison.KN264915.1                                   301727  0 -   6870073 C
e Beatragus_hunteri.BeaHun_scaffold_21644                   47579  0 -     72089 C
e Balaenoptera_bonaerensis.DF502048.1                        8754  0 -     13118 C
e Balaenoptera_acutorostrata.KI537095.1                  26383581  0 +  51448160 C
e Artibeus_jamaicensis.ArtJam_scaffold_41619                10440 261 -     29036 I
e Antilocapra_americana.AntAmePen_scaffold_27338             2548  0 +     55446 C
e Anoura_caudifer.AnoCau_scaffold_422                      392020 257 -    631301 I
e Ammotragus_lervia.NIVO01013474.1                        3525117  0 +   4113121 C
e Ailurus_fulgens.LNAC01000003.1                          7099380  0 -  16596857 C
e Ailuropoda_melanoleuca.LNAT01000321.1                  10662594  0 +  23371972 C
e Acinonyx_jubatus.LLWD01000356.1                         2038912  0 +   3721120 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           20901  0 -    119109 C
e Glis_glis.GliGli_scaffold_79770                           15993  0 -     18683 C
e Zapus_hudsonius.ZapHud_scaffold_64392                     20218  0 -     20485 C
e Jaculus_jaculus.JH725517.1                              8577088  0 +  11848649 C
e Hylobates_pileatus_a.tarseq_592                             35692 75 -     60944 I
e Allactaga_bullata.AllBul_scaffold_70162                   21404  0 -     22067 C
e Galeopterus_variegatus.GalVar_scaffold_354               159184  0 +    324696 C
e Microtus_ochrogaster.CM001673.1                        22823881  0 -  98408828 C
e Xerus_inauris.XerIna_scaffold_7898                       128400 2868 -    134049 I
e Varecia_variegata.k141_775891                             27530  0 -     33872 C
e Varecia_rubra.k141_432109                                  7995  0 -     20643 C
e Tupaia_tana.TupTan_flattened_line_68454                    9338  0 +     13056 C
e Tupaia_chinensis.KB320831.1                             2797404  0 -   3938065 C
e Tarsius_wallacei.k141_48636                               60532 3805 +     65473 I
e Tarsius_lariang.k141_609102                               27216 3812 +     42269 I
e Spermophilus_dauricus.KZ294190.1                        2243603  0 +   2842873 C
e Sigmodon_hispidus.SigHis_scaffold_11332                  104689  0 -    120886 C
e Rattus_norvegicus.chr11                                13917336  0 +  90463843 C
e Psammomys_obesus.NESX01026517.1                           37921  0 +     77221 C
e Propithecus_verreauxi.k141_158021                         42002  0 -     48185 C
e Propithecus_tattersalli.k141_907138                       19738  0 -     53241 C
e Propithecus_perrieri.k141_7554                            20103  0 +     27322 C
e Propithecus_edwardsi.k141_1317105                         38180  0 -     44753 C
e Propithecus_diadema.k141_577245                           45793  0 +     52369 C
e Propithecus_coronatus.k141_1353159                         6446  0 +     11805 C
e Propithecus_coquerelli.NW_012147863.1                     20390  0 -     30946 C
e Prolemur_simus.MPIZ01000048.1                           6851355  0 +  12164890 C
e Plecturocebus_moloch.k141_890597                          25717  0 -     75465 C
e Plecturocebus_miltoni.k141_841561                         15130  0 +    134592 C
e Plecturocebus_hoffmannsi.k141_985533                       3215  0 -    119457 C
e Plecturocebus_grovesi.k141_242819                         25407  0 +    152463 C
e Plecturocebus_dubius.k141_3565563                          6053  0 -     55515 C
e Plecturocebus_cupreus.k141_1145860                         1970  0 -     43940 C
e Plecturocebus_cinerascens.k141_744510                     25334  0 +    147771 C
e Plecturocebus_caligatus.k141_2539816                      15734  0 -     98129 C
e Plecturocebus_brunneus.k141_498086                        25495  0 +     67491 C
e Plecturocebus_bernhardi.k141_959214                       25282  0 +     44506 C
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Peromyscus_maniculatus.KI615518.1                       4955125  0 -   8017169 C
e Perodicticus_potto.k141_1136815                           10207  0 +     61070 C
e Perodicticus_ibeanus.k141_117958                           9080  0 -     23713 C
e Otolemur_garnettii.GL873528.1                          18011493  0 -  38779656 C
e Otolemur_crassicaudatus.k141_505435                        3512  0 -     53940 C
e Onychomys_torridus.OnyTor_scaffold_12578                  42756  0 +     62360 C
e Ondatra_zibethicus.OndZib_scaffold_6821                  130071  0 +    145789 C
e Octodon_degus.JH651621.1                                3687420 1881 +  10294119 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65678347  0 +  89412551 C
e Nycticebus_coucang.k141_771591                            13545  0 +     16181 C
e Nycticebus_bengalensis.LG16                            65570136  0 -  95554990 C
e Nannospalax_galili.KL201303.1                            119867  0 +    362372 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     91920 1922 -    117718 I
e Muscardinus_avellanarius.MusAve_scaffold_9643             14525  0 +     98495 C
e Mus_spretus.CM004110.1                                 74336277  0 +  97876770 C
e Mus_pahari.LT608305.1                                  67559927  0 +  89017189 C
e Mus_musculus.chr16                                     75493550  0 +  98207768 C
e Mus_caroli.LT608236.1                                  70771497  0 +  92629107 C
e Mirza_zaza.k141_593947                                     4089  0 -     12809 C
e Microcebus_murinus.CM007691.1                          16513035  0 +  47401472 C
e Mesocricetus_auratus.KB708139.1                         1051192  0 -  26018355 C
e Meriones_unguiculatus.MerUng_scaffold_52233               15570  0 +     15977 C
e Marmota_marmota.CZRN01000005.1                         36877588  0 +  64221397 C
e Loris_tardigradus.ctg97                                 3781302  0 +   6799190 C
e Loris_lydekkerianus.k141_550999                           13563  0 +     84689 C
e Lepilemur_septentrionalis.k141_710646                      1084  0 -     13103 C
e Lepilemur_ruficaudatus.k141_574529                        35037  0 -     38897 C
e Lepilemur_dorsalis.k141_134267                            56656  0 +     63517 C
e Lepilemur_ankaranensis.k141_884009                        27292  0 +     39228 C
e Lemur_catta.scaffold_1                                258409979  0 - 285822530 C
e Indri_indri.k141_2197838                                    116  0 +      3484 C
e Ictidomys_tridecemlineatus.JH393315.1                   7129728  0 +  13083262 C
e Hystrix_cristata.HysCri_scaffold_50788                     7688 1865 +     22540 I
e Heterocephalus_glaber.JH602058.1                        2560252  0 +  31725842 C
e Hapalemur_occidentalis.k141_797938                        48308  0 -     54384 C
e Hapalemur_meridionalis.k141_186231                        31681  0 -     42470 C
e Hapalemur_griseus.k141_1387522                             8432  0 +     56096 C
e Hapalemur_gilberti.k141_279011                             3105  0 -     11661 C
e Hapalemur_alaotrensis.k141_1280836                         4627  0 +     10286 C
e Graphiurus_murinus.GraMur_scaffold_4493                   79386  0 +    118900 C
e Galagoides_demidoff.k141_1769638                          13144  0 +     27357 C
e Galago_senegalensis.k141_964197                           16038  0 -     43889 C
e Galago_moholi.ctg555                                     213680  0 -    847004 C
e Fukomys_damarensis.KN123630.1                          13895732  0 -  19261668 C
e Eulemur_sanfordi.k141_186399                              18623  0 -     29447 C
e Eulemur_rufus.k141_1620292                                35891  0 +     46535 C
e Eulemur_rubriventer.k141_411740                           21157  0 +     26808 C
e Eulemur_mongoz.k141_825972                                18693  0 +     27497 C
e Eulemur_macaco.k141_747087                                 2027  0 -     19505 C
e Eulemur_fulvus.k141_653297                                14043  0 +    109717 C
e Eulemur_flavifrons.k141_903901                            10560  0 +     60246 C
e Eulemur_coronatus.k141_3240342                            14235  0 +     36558 C
e Eulemur_collaris.k141_1015201                              1102  0 -      4292 C
e Eulemur_albifrons.k141_715837                              7832  0 +     13586 C
e Ellobius_talpinus.LOJH01198462.1                           1213  0 -      1901 C
e Ellobius_lutescens.LOEQ01003611.1                        243471  0 -    369425 C
e Dolichotis_patagonum.DolPat_scaffold_14102                39604  0 -     73477 C
e Daubentonia_madagascariensis.ctg11                     16847687  0 +  31942871 C
e Dasyprocta_punctata.DasPun_flattened_line_634             61584  0 -    236241 C
e Cuniculus_paca.CunPac_flattened_line_16637                20446  0 +     26546 C
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 32592 1717 -     67205 I
e Ctenodactylus_gundi.CteGun_scaffold_447                  213664  0 -    956709 C
e Cricetulus_griseus.LT883672.1                          53034667  0 +  72327488 C
e Cricetomys_gambianus.CriGam_scaffold_949                 282297  0 -    399297 C
e Chinchilla_lanigera.JH721867.1                         15963245 964 +  43084221 I
e Cheirogaleus_medius.k141_133808                           10871  0 +     13308 C
e Cheirogaleus_major.k141_1157592                           61827  0 -     68416 C
e Cephalopachus_bancanus.k141_702587                         8788 3391 +     21754 I
e Cavia_tschudii.CavTsc_scaffold_488                       177725 1742 +    436027 I
e Cavia_porcellus.DS562889.1                             15799553 1742 -  24440124 I
e Cavia_aperea.AVPZ01000278.1                            15787615 1741 -  24422027 I
e Carlito_syrichta.NW_007248099.1                          309764 3411 +    345090 I
e Avahi_peyrierasi.k141_798820                               3156  0 +      6337 C
e Avahi_laniger.k141_2840928                                 9540  0 -     16375 C
e Arctocebus_calabarensis.k141_587554                        4710  0 +      9265 C
e Acomys_cahirinus.AcoCah_scaffold_1625                    117433  0 -    189883 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               16344 247 +    209709 ATGTCTtatttggtcttcctccccggttcacagtacagagctcctaaaa--cT--TGAAATTTCCTGA----TAgagatgagaggaccatcctttactagtcataagtccctcttag-ccatacctgagtttatgctattgacatgacATGAGTGGT-GGCTGGAGAcccat--atggcttcaaggtgggtgcttgacaccagaaacatgaaggcataactagatggttaaaactgtcagccctctcctccatcacct-----c
s Allenopithecus_nigroviridis.k141_2469532                   4067 250 -     60446 Atgttctatttggtcttcctccccagttcatggtgcagagctcctaaaactct--tgaaatttcctga----tagggatgagaggaccaccctttactagtcacaagtcccttttag-ccacacctgagtttatgctattggcatgacatgactggtgggctggagacccgc--atagcttcagggcgggtgctgggcacgagagagatgaaggcataactagattgttgggactgtcagccctctcgtccatcacct-----c
i Allenopithecus_nigroviridis.k141_2469532              C 0 I 141
s Allochrocebus_lhoesti.k141_3566948                         4785 250 -     29318 Atgttctatttggtcttcctccccagttcatggtgcagagctcctaaaactct--tgaaatttcctga----tagggatgagaggaccaccctttgctagtcacaagtcccttttag-ccacacctgagtttatgctattggcatgacatgactggtgggctggagatccgc--atagcttcagggcgggtgctgggcaccagagagatgaaggcataactagactgttgggactgtcagcactctcccccatcacct-----c
i Allochrocebus_lhoesti.k141_3566948                    C 0 I 141
s Allochrocebus_preussi.k141_1108977                         3723 250 +     38766 Atgttctatttggtcttcctccccagttcatggtgcagagctcctaaaactct--tgaaatttcctga----tagggatgaaaggaccaccctttactagtcacaagtcccttttag-ccacacctgagtttatgctattggcatgacatgactggtgggctggagacccgc--atagcttcagcgcgggtgctgggcaccagagagatgaaggcataactagactgttgggactgtcagcactctcccccatcacct-----c
i Allochrocebus_preussi.k141_1108977                    C 0 I 141
s Allochrocebus_solatus.k141_371672                          4679 249 -     80423 Atgttctatttggtcttcctccccagttcatggtgcagagctcctaaaactct--tgaaatttcctga----tagggatgagaggaccaccctttact-gtcacaagtcccttttag-ccacacgtgagtttatgctattggcatgacatgactggtgggctggagacccac--atagcttcagcgcgggtgctgggcaccagagagatgaaggcataactagactgttgggactgtcagcactctcctccatcacct-----c
i Allochrocebus_solatus.k141_371672                     C 0 I 141
s Alouatta_belzebul.k141_165776                             16032 250 +     19426 atgacctatttggtcttcctccccagttcatggtacagagctcctaaaa--ctcttgtaatctcctgaatgatagggatgagaggaccatcctttACTAGTCATAAGTCCCTTTTAGC-CATACCTGAGTTTATGCTGTTAACA-----TGACTAGT-GTCTGGAGACCTGTAGATAGTTTCAGGATAGGTACTGGACAACAGAAAGATGAAGGCATAACTAGACTGTTGGAACTGTCATCCCTCTCCTCCATCACTg-----g
i Alouatta_belzebul.k141_165776                         C 0 C 0
s Alouatta_caraya.k141_664908                                1584 250 -     12443 atgacctatttggtcttcctccccagttcatcgtacagagctcctaaaa--ctcttgtaatctcctcaatgatagggatgagaggaccatcctttACTAGTCATAAGTCCCTTTTAGC-CATACCTGAGTTtatgctgttaaca-----tgactagt-gtctggagacctgtagatagtttcaggataggtactggaaaacagaaagatgaaggcataactagactgttggaactgtcatccctctcctccatcactg-----g
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2476351                             1307 250 +     41985 atgacctatttggtcttcctccccagttcacggtacagagctcctaaaa--ctcttgtaatctcctgaatgatagggatgagaggaccatcctttACTAGTCATAAGTCCCTTTTAGC-CATACCTGAGTTtatgctgttaaca-----tgactagt-gtctggagacctgtagatagtttcaggataggtactggacaacagaaagatgaaggcataactagactgttggaactgtcatccctctcctccatcactg-----g
i Alouatta_discolor.k141_2476351                        C 0 C 0
s Alouatta_juara.k141_2534995                                3061 250 +      4011 atgacctatttggtcttcctccccagttcatcgtacagagctcctaaaa--ctcttgtaatctcctgaatgatagggatgagaggaccatcctttACTAGTCATAAGTCCCTTTTAGC-CATACCTGAGTTTATGCTGTTAACA-----TGACTAGT-GTCTGGAGACCTGTAGATAGTTTCAGGATAGGTACTGGACAACAGAAAGATGAAGGCATAACTAGACTGTTGGAACTGTCATCCCTCTCCTCCATCACTG-----G
i Alouatta_juara.k141_2534995                           C 0 C 0
s Alouatta_macconnelli.k141_2318944                          1383 250 -     24210 atgacctatttggtcttcctccccagttcatcgtacagagctcctaaaa--ctcttgtaatctcctcaatgatagggatgagaggaccatcctttACTAGTCATAAGTCCCTTTTAGC-CATACCTGAGTTtatgctgttaaca-----tgactagt-gtctggagacctgtagatagtttcaggataggtactggacaacagaaagatgaaggcatgactagactgttggaactgtcatccctctcctccatcactg-----g
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           27965 250 -     30219 atgacctatttggtcttcctccccagttcatcgtacagagctcctaaaa--ctcttgtaatctcctcaatgatagggatgagaggaccatcctttACTAGTCATAAGTCCCTTTTAGC-CATACCTGAGTTtatgctgttaaca-----tgactagt-gtctggagacctgtagatagtttcaggataggtactggacaacagaaagatgaaggcataactagactgttggaactgtcatccctctcctccatcactg-----g
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_2378775                               24 250 +      5328 ATGACCtatttggtcttcctccccagttcatggtacagagctcctaaaa--ctcttgtaatctcctgaatgatagggatgagaggaccatcctttACTAGTCATAAGTCCCTTTTAGC-CATACCTGAGTTtatgctgttaaca-----tgactaat-gtctggagacctgtagatagtttcaggataggtactggacaacagaaagatgaaggcataactagactgttggaactgtcatccttctcctccatcactg-----g
i Alouatta_palliata.k141_2378775                        N 0 C 0
s Alouatta_puruensis.k141_398195                            44155 250 +     45367 atgacctatttggtcttcctccccagttcatcatacagagctcctaaaa--ctcttgtaatctcctcaacgatagggatgagaggaccatcccttACTAGTCATAAGTCCCTTTTAGC-CATACCTGAGTTtatgctgttaaca-----tgactagt-gtctggagacctgtagatagtttcaggataggtactggacaacagaaagatgaaggcataactagactgttggaactgtcatccctctcctccatcactg-----g
i Alouatta_puruensis.k141_398195                        C 0 C 0
s Alouatta_seniculus.k141_790278                             3074 250 -      9835 atgacctatttggtcttcctccccagttcatcgtacagagctcctaaaa--ctcttgtaatctcctgaatgatagggatgagaggaccatcctttACTAGTCATAAGTCCCTTTTAGC-CATACCTGAGTTTATGCTGTTAACA-----TGACTAGT-GTCTGGAGACCTGTAGATAGTTTCAGGATAGGTACTGGACAACAGAAAGATGAAGGCATAACTAGACTGTTGGAACTGTCATCCCTCTCCTCCATCACTG-----G
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Aotus_azarae.k141_3170768                                 65013 250 +     78111 atgtcctatttggtcttcctccccagttcatggtacagagctcctaaaa--ctcttgtaatctcctgaatgatagggatgagaggaccatcctttACTAGTCATAAGTCCCTTTTAG-CCATACCTGAGtttatgctattgaca-----tgactagt-gtctggagacctgtagatagtttcaggataggtactggacaccagaaagatgaaggcataactagactgttggaactgtcacccctctcctccatcactg-----g
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            7964 255 +     22701 atgacctatttggtcttcctcctcagttcatggtacagagctcctaaaa--ctcttgtaatctcctgaatgatagggatgagaggaccatcctttACTAGTCATAAGTCCCTTTTAG-CCATACCTGAGtttatgctattgaca-----tgactagt-gtctggagacctgtagatagtttcaggataggtactggacaccagaaagatgaaggcataactagactgttggaactgtcacccctctcctccatcactgNNNNNg
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5751917 250 +   9889416 ATGACCTATTTGgtcttcctccccagttcatggtacagagctcctaaaa--ctctTGTAATCTCCTGAATGATAGGGATGAGAGGACCATCCTTTACTAGTCATAAGTCCCTTTTAG-CcatacctgagtttatgctaTTGACA-----TGACTAGT-GTCTGgagacctgtagatagtttcaggataggtactggacaccagaaagatgaaggcataactagactgttggaactGTCACCCCTCTCCTCCATcactg-----g
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             8510 250 -    104377 atgacctatttggtcttcctccccagttcatggtacagagctcctaaaa--ctcttgtaatctcctgaatgatagggatgagaggaccatcctttACTAGTCATAAGTCCCTTTTAG-CCATACCTGAGtttatgctattgaca-----tgactagt-gtctggagacctgtagatagtttcaggataggtactggacaccagaaagatgaaggcataactagactgttggaactgtcacccctctcctccatcactg-----g
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               8512 255 +     23246 atgacctatttggtcttcctccccagttcatggtacagagctcctaaaa--ctcttgtaatctcctgaatgatagggatgagaggaccatcctttACTAGTCATAAGTCCCTTTTAG-CCATACCTGAGtttatgctattgaca-----tgactagt-gtctggagacctgtagatagtttcaggataggtactggacaccagaaagatgaaggcataactagactgttggaactgtcacccctctcctccatcactgNNNNNg
i Aotus_vociferans.k141_718647                          C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9541772 250 +  39197703 atgacctatttggtcttcctccccagttcatggtacagagctcctaaaa--ctcttgtaatctcctgaatgatagggatgagaggaccatcctttACTAGTCATAAGTCCCTTTTAG-CCATACCTGAGTTTATGCTGTTAACA-----TGACTAGT-GTCTGGAGACCTGTAGATAGTTTCAGGATAGGTACTGGATACCAGAAAGATGAAGACATAACTAGACTGTTGGAACTGTCACCCCTCTCCTCCATCACTg-----g
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             63045 250 +     85812 atgacctatttggtcttcctccccagttcatggtacagagctcctaaaa--ctcttgtaatctcctgaatgatagggatgagaggaccatcctttACTAGTCATAAGTCCCTTTTAG-CCATACCTGAGTTTATGCTGTTAACA-----TGACTAGT-GTCTGGAGACCTGTAGATAGTTTCAGGATAGGTACTGGACACCAGAAAGATGAAGACATAACTAGACTGTTGGAACTGTCACCCCTCTCCTCCATCACTg-----g
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                14058 250 +     89302 atgacctatttggtcttcctccccagttcatggtacagagctcctaaaa--ctcttgtaatctcctgaatgatagggatgagaggaccatcctttACTAGTCATAAGTCCCTTTTAG-CCATACCTGAGTTTATGCTGTTAACA-----TGACTAGT-GTCTGGAGACCTGTAGATAGTTTCAGGATAGGTACTGGACACCAGAAAGATGAAGACATAACTAGACTGTTGGAACTGTCACCCCTCTCCTCCATCACTg-----g
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             18559 250 -     58268 atgacctatttggtcttcctccccagttcatggtacagagctcctaaaa--ctcttgtaatctcctgaatgatagggatgagaggaccatcctttACTAGTCATAAGTCCCTTTTAG-CCATACCTGAGTTTATGCTGTTAACA-----TGACTAGT-GTCTGGAGACCTGTAGATAGTTTCAGGATAGGTACTGGATACCAGAAAGATGAAGACATAACTAGACTGTTGGAACTGTCACCCCTCTCCTCCATCACTG-----G
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             66553 250 +    119057 atgacctatttggtcttcctccccagttcatggtacagagctcctaaaa--ctcttgtaatctcctgaatgatagggatgagaggaccatcctttACTAGTCATAAGTCCCTTTTAG-CCATACCTGAGTTTATGCTGTTAACA-----TGACTAGT-GTCTGGAGACCTGTAGATAGTTTCAGGATAGGTACTGGACACCAGAAAGATGAAGACATAACTAGACTGTTGGAACTGTCACCCCTCTCCTCCATCACTg-----g
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               8522 250 -     25888 atgacctatttggtcttcctccccagttcatggtacagagttcctaaaa--ctcttgtaatctcctgaatgatagggatgagaggaccatcctttACTAGTCATAAGTCCCTTTTAG-CCATACCTGAGTTTATGCTGTTAACA-----TGACTAGT-GTCTGGAGACCTGTAGATAGTTTCAGGATAGGTACTGGACACCAGAAAGATGAAGACATAACTAGACTGTTGGAACTGTCACCCCTCTCCTCCATCACTG-----G
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Cacajao_ayresi.k141_724503                               116422 250 -    171031 atgacctatctggtcttcctccccagttcatggtacagagctcctaaaa--ctcttgtaatctcctgaatgatagggatgagaggaccatcgtttACTAGTCATAAGTCCCTTTTAG-CCATATCTGAGTTTATGCTATTGACA-----TGACTAGT-GTCTGGAGACCTGTAGATAGTTTCAGGATAGGTACTGGACACCAGAAAGATGAAGACATAACTAGACTGTTGGAACTGTCACCCCTCTCCTCCATCACTA-----G
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 15447 250 +    125063 atgacctatctggtcttcctccccagttcatggtacagagctcctaaaa--ctcttgtaatctcctgaatgatagggatgagaggaccatcgtttACTAGTCATAAGTCCCTTTTAG-CCATATCTGAGTTTATGCTATTGACA-----TGACTAGT-GTCTGGAGACCTGTAGATAGTTTCAGGATAGGTACTGGGCACCAGAAAGATGAAGGCATAACTAGACTGTTGGAACTGTCACCCCTCTCCTCCATCACTA-----g
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                17494 250 -    216513 atgacctatctggtcttcctccccagttcatggtacagagctcctaaaa--ctcttgtaatctcctgaatgatagggatgagaggaccatcgtttACTAGTCATAAGTCCCTTTTAG-CCATATCTGAGTTTATGCTATTGACA-----TGACTAGT-GTCTGGAGACCTGTAGATAGTTTCAGGATAGGTACTGGACACCAGAAAGATGAAGGCATAACTAGACTGTTGGAACTGTCACCCCTCTCCTCCATCACTA-----G
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       10037 250 -    134917 atgacctatctggtcttcctccccagttcatggtacagagctcctaaaa--ctcttgtaatctcctgaatgatagggatgagaggaccatcgtttACTAGTCATAAGTCCCTTTTAG-CCATATCTGAGTTTATGCTATTGACA-----TGACTAGT-GTCTGGAGACCTGTAGATAGTTTCAGGATAGGTACTGGACACCAGAAAGATGAAGACATAACTAGACTGTTGGAACTGTCACCCCTCTCCTCCATCACTA-----G
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Cebus_albifrons.Contig22                               18893259 250 -  29618158 atgacctatttggtcttcctccccagttcatggtacacagctcctaaaa--ctcttgtaatctcctgaatgatagggatgagagggccttcctttACTAGTCATAAGTGCCTTTTCG-ATATACCTGAGTTtatgctattgacg-----tgactatt-gtctgaagacctgtaggtagtttcatgataggtactggaaaccagaaagataaaggcataactagactgttggaactgtcacacctctcctccatcactg-----g
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                10803 250 -     26817 atgacctatttggtcttcctccccagttcatggtacacagctcctaaaa--ctcttgtaatctcctgaatgatagggatgagagggccttcctttACTAGTCATAAGTGCCTTTTCG-ATATACCTGAGTTtatgctattgacg-----tgactatt-gtctgaagacctgtaggtagtttcatgataggtactggaaaccagaaagataaaggcataactagactgttggaactgtcacacctctcctccatcactg-----g
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                15046 250 +     25043 atgacctatttggtcttcctccccagttcatggtacacagctcctaaaa--ctcttgtaatctcctgaatgatagggatgagagggccttcctttACTAGTCATAAGTGCCTTTTCG-ATATACCTGAGTTtatgctattgacg-----tgactatt-gtctgaagacctgtaggtagtttcatgataggtactggaaaccagaaagataaaggcataactagactgttggaactgtcacacctctcctccatcactg-----g
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cercocebus_atys.KQ010443.1                              6558008 250 +   6739814 ATGTTCTATTTggtcttcctccccagttcatggTGCAGAGCTCCTAAAACTCT--TGAAATTTCCTGA----TAGGGATGAGAGGACCACCCTTTACTAGTCACAAGTCCCTTTTAG-CcacacctgagtttatgctatTGGCATGACATGACTGGTGGGCTGGAGACCCGC--ATAGCTTCAGGGCGGGTGCTGGGCGCCAGAGAGATGAAGGCATAACTAGATTGTTGGGACTGTCAGCCCTCTCCTCCATCACCt-----c
i Cercocebus_atys.KQ010443.1                            C 0 I 141
s Cercocebus_chrysogaster.k141_2328246                      29485 250 +     60454 Atgttctatttggtcttcctccccagttcatggtgcagagctcctaaaactct--ggacatttcctga----tagggatgagaggaccaccctttactagtcacaagtcccttttag-ccacacctgagtttatgctattggcatgacatgactggtgggctggagacccgc--atagcttcagggcgggtgctgggcgccagagagatgaaggcataactagattgttgggactgtcagccctctcctccatcacct-----c
i Cercocebus_chrysogaster.k141_2328246                  C 0 I 141
s Cercocebus_lunulatus.k141_4634644                          4689 250 -     21101 Atgttctatttggtcttcctccccagttcatggtgcagagctcctaaaactct--tgaaatttcctga----tagggatgagaggaccaccctttactagtcacaagtcccttttag-ccacacctgagtttatactattggcatgacatgactggtgggctggagacccac--atagcttcagggcgggtgctgggcgccagagagatgaaggcataactagattgttgggactgtcagccctctcctccatcacct-----c
i Cercocebus_lunulatus.k141_4634644                     C 0 I 141
s Cercocebus_torquatus.k141_3969582                         61999 250 -    107033 Atgttctatttggtcttcctccccagttcatggtgcagagctcctaaaactct--tgaaatttcctga----tagggatgagaggaccaccctttactagtcacaagtcccttttag-ccacacctgagtttatgctattggcatgacatgactggtgggctggagacccgc--atagcttcagggcgggtgctgggcgccagagagatgaaggcataactagattgttgggactgtcagccctctcctccatcacct-----c
i Cercocebus_torquatus.k141_3969582                     C 0 I 141
s Cercopithecus_ascanius.k141_4123525                        4882 250 -     17608 Atgttctatttggtcttcctccccagttcatggtgcagagctcctaaaactct--tgaaatttcctga----tacggatgagaggaccaccctttactagtcacaagtcccttttag-ccacacctgagtttatgctattggcatgacatgactggtgggctggagacccgc--atagcttcagggcgggtgctgggcaccagggagatgacggcataactagattgttgggactgtcagccctctcctccatcacct-----c
i Cercopithecus_ascanius.k141_4123525                   C 0 I 141
s Cercopithecus_cephus.k141_3893260                          2046 250 +     45019 Atgttctatttggtcttcctccccagttcatggtgcagagctcctaaaactct--tgaaatttcctga----tacggatgagaggaccaccctttactagtcacaagtcccttttag-ccacacctgagtttatgctattggcatgacatgactggtgggctggagacccgc--atagcttcagggcgggtgctgggcaccagggagatgacggcataactagattgttgggactgtcagccctctcctccatcacct-----c
i Cercopithecus_cephus.k141_3893260                     C 0 I 141
s Cercopithecus_diana.k141_2561715                           2112 250 +     15177 Atgttctatttggtcttcctccccagttcatggtgcagagctcctaaaactct--tgaaatttcctga----tacggatgagaggaccaccctctactagtcacaagtcccttttag-ccacacctgagtttatgctattggcatgacatgactggtgggctggagacccgc--gcagcttcagggcgggtgctgggcaccagggagatgacggcataactagattgttgggactgtcagccctctcctccatcacct-----c
i Cercopithecus_diana.k141_2561715                      C 0 I 140
s Cercopithecus_hamlyni.k141_129805                          4930 250 +     16677 Atgttctatttggtcttcctgcccagttcatggtgcagagctcctaaaactct--tgaaatttcctga----tacggatgagaggaccaccctttactagtcacaagtcccttttag-ccacacctgagtttatgctattggcatgacatgactggtgggctggagacccgc--gtagcttcagggcgggtgctgggcaccagggagatgacggcaaaactagattgttgggactgtcagccctctcctccatcacct-----c
i Cercopithecus_hamlyni.k141_129805                     C 0 I 141
s Cercopithecus_lowei.k141_623764                           27097 250 +     35983 Atgttctatttggtcttcctccccagttcatggtgcagagcttctaaaactct--tgaaatttcctga----tacggatgagaggaccaccctttactagtcacaagtcccttttag-ccacacctgagtttatgctattggcatgacatgactggtgggctggagacccgc--atagcttcagggcgggtgctgggcaccagggagatgacggcataactagattgttgggactgtcagccctctcctccatcacct-----c
i Cercopithecus_lowei.k141_623764                       C 0 I 141
s Cercopithecus_albogularis.ctg51                              11993628 250 +  12117833 Atgttctatttggtcttcctccccagttcatggtgcagagctcctaaaactct--tgaaatttcctga----tacggatgagaggaccaccctttactagtcacaagtcccttttag-ccacacctgagtttatgctattggcatgacatgactggtgggctggagacccgc--atagcttcagggcaggtgctgggcaccagggagatgacggtataactagattgttgggactgtcagccctctcctccatcacct-----c
i Cercopithecus_albogularis.ctg51                             C 0 I 141
s Cercopithecus_mona.ctg12                               46480386 250 +  46592721 Atgttctatttggtcttcctccccagttcatggtgcagagcttctaaaactct--tgaaatttcctga----tacggatgagaggaccaccctttactagtcacaagtcccttttag-ccacacctgagtttatgctattggcatgacatgactggtgggctggagacccgc--atagcttcagggcgggtgctgggcaccagggagatgacggcataactagattgttgggactgtcagccctctcctccatcacct-----c
i Cercopithecus_mona.ctg12                              C 0 I 141
s Cercopithecus_neglectus.k141_2078027                      43940 250 -     45581 Atgttctatttggtcttcctccccagttcatggtgcagagctcctaaaactct--tgaaatttcctga----ttcggatgagaggaccaccctttactagtcacaagtcccttttag-ccacacctgagtttatgctattggcatgacatgactggtgggctggagacccgc--atagcttcagggcgggtgctgggcaccagggagatgacagcataactagattgttgggactgtcagccctctcctccatcacct-----c
i Cercopithecus_neglectus.k141_2078027                  C 0 I 141
s Cercopithecus_nictitans.k141_1129315                       4942 250 +     35577 Atgttctatttggtcttcctccccagttcatggtgcagagctcctaaaactct--tgaaatttcctga----tacggatgcgaggaccaccctttactagtcacaagtcccttttag-ccacacctgagtttatgctattggcatgacatgactggtgggctggagacccgc--atagcttcagggcgggtgctgggcaccagggagatgacggcataactagattgttgggactgtcagccctctcctccatcacct-----c
i Cercopithecus_nictitans.k141_1129315                  C 0 I 141
s Cercopithecus_petaurista.k141_64532                        4715 250 -     25661 Atgttctatttggtcttcctccccagttcatggtgcagagctcctaaaactct--tgaaatttcctga----tacggatgagaggaccaccctttactagtcacaagtcccttttag-ccacacctgagtttatgctattggcatgacatgactggtgggctggagacccgc--atagcttcagggcgggtgctgggcaccagagagatgaaggcataactagattgttgggactgtcagccctctcctccatcacct-----c
i Cercopithecus_petaurista.k141_64532                   C 0 I 141
s Cercopithecus_pogonias.k141_3109732                        4694 250 -     17744 Atgttctatttggtcttcctccccagttcatggtgcagagctcctaaaactct--tgaaatttcctga----tacggatgagaggaccaccctttactagtcacaagtcccttttag-ccacacctgagtttatgctattggcatgacatgactggtgggctggagacccgc--atagcttcagggcgggtgctgggcaccagggagatgacggcataactagattgttgggactgtcagccctctcctccatcacct-----c
i Cercopithecus_pogonias.k141_3109732                   C 0 I 141
s Cercopithecus_roloway.k141_2263608                        24278 250 +     37128 Atgttctatttggtcttcctccccagttcatggtgcagagctcctaaaactct--tgaaatttcctga----tagggatgagaggaccaccctttactagtcacaagtcccttttag-ccacacctgagtttatgctattgggatgacatgactggtgggctggagacccgc--atagcttcagggcgggtgctgggcaccagggagatgacggcataactagattgttgggactgtcagccctctcctccatcacct-----c
i Cercopithecus_roloway.k141_2263608                    C 0 I 141
s Cheracebus_lucifer.k141_619653                             8080 249 -     18223 ATGatctatttggtcttcctccccagttcatggtacagagctcctaaaa--ctcttgtaatctcctggatgatagggatgagaggaccatcctttACTAGTCATAAGTCC-TTTTAG-CCATACCTGAGTTTATGCTATTGACA-----TGACTAGT-GGCTGGAGACCTGTAGACAGTTTCAGGATAGGTACTGGACACCAGAAATATGAAGGCATACCTAGACTGTTGGAACAGCCACCCCTCTCCTCCATCATTG-----G
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_203936                             25098 249 +     25473 ATGatctatttggtcttcctccccagttcatggtacagagctcctaaaa--ctcttgtaatctcctggatgatagggatgagaggaccatcctttactagtcataagtcc-ttttaa-ccatacctgagtttatgctattgaca-----tgactagt-ggctggagacctgtagacagtttcaggataggtactggacaccagaaatatgaaggcatacctagactgttggaacagccacccctctcctccatcattg-----g
i Cheracebus_lugens.k141_203936                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           44138 249 +     57117 ATGatctatttggtcttcctccccagttcatggtacagagctcctaaaa--ctcttgtaatctcctggatgatagggatgagaggaccatcctttACTAGTCATAAGTCC-TTTTAG-CCATACCTGAGTTTATGCTATTGACA-----TGACTAGT-GGCTGGAGACCTGTAGACAGTTTCAGGATAGGTACTGGACACCAGAAATATGAAGGCGTACCTAGACTGTTGGAACAGCCACCCCTCTCCTCCATCATTG-----G
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          48817 249 +     54541 ATGatctatttggtcttcctccccagttcatggtacagagctcctaaaa--ctcttgtaatctcctggatgatagggatgagaggaccatcctttACTAGTCATAAGTCC-TTTTAG-CCATACCTGAGTTTATGCTATTGACA-----TGACTAGT-GGCTGGAGACCTGTAGACAGTTTCAGGATAGGTACTGGACACCAGAAATATGAAGGCATACCTAGACTGTTGGAACAGCCACCCCTCTCCTCCATCATTG-----G
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chiropotes_israelita.k141_1189915                         73618 250 +    196370 atgacctatctggtcttcctccccagttcatggtacagagctcctaaaa--ctcttgtaatctcctgaatgatagggatgagaggaccatcgtttACTAGCCATAAGTCCCTTTTAG-CCATATCTGAGTTTATGCTATTGACA-----TGACTAGT-GTCTGGAGACCAGTAGATAGTTCCAGGATAGGTACTGAACACCAGAAAGATGAAGGCATAACTAGACTGTTGGAACTGTCACCCCTCTCCTCCATCACTA-----g
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          17799 250 +     40510 atgacctatctggtcttcctccccagttcatggtacagagctcctaaaa--ctcttgtaatctcctgaatgatagggatgagaggaccatcgtttACTAGCCATAAGTCCCTTTTAG-CCATATCTGAGTTTATGCTATTGACA-----TGACTAGT-GTCTGGAGACCAGTAGATAGTTCCAGGATAGGTACTGAACACCAGAAAGATGAAGGCATAACTAGACTGTTGGAACTGTCACCCCTCTCCTCCATCACTA-----g
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15142297 250 -  15256731 Atgttctatttggtcttcctccccagttcatggtgcagagctcctaaaactct--tgaaatttcctga----tagggatgagaggaccaccctttactagtcacaagtcccttttag-ccacacctgagtttatgctgttggcatgacatgactggtgggctggagacccgc--atagcttcagcgcgggtgctgggcaccagagagatgaaggcataactagattgtcgggactgtcagccctctcctccatcacct-----c
i Chlorocebus_aethiops.ctg22                            C 0 I 141
s Chlorocebus_pygerythrus.k141_1486215                      36906 250 -     53260 Atgttctatttggtcttcctccccagttcatggtgcagagctcctaaaactct--tgaaatttcctga----tagggatgagaggaccaccctttactagtcacaagtcccttttag-ccacacctgagtttatgctgttggcatgacatgactggtgggctggagacccgc--atagcttcagcgcgggtgctgggcaccagagagatgaaggcataactagattgtcgggactgtcagccctctcctccatcacct-----c
i Chlorocebus_pygerythrus.k141_1486215                  C 0 I 141
s Chlorocebus_sabaeus.CM001963.2                        101147465 250 + 101219884 ATGTTCTATTtggtcttcctccccagttcatggTGCAGAGCTCCTAAAACTCT--TGAAATTTCCTGA----TAGGGATGAGAGGACCACCCTTTACTAGTCACAAGTCCCTTTTAG-CCACACCTGAGTTTATGCTGTTGGCATGACAAGACTGGTGGGCTGGAGACCCGC--ATAGCTTCAGGGCGGGTGCTGGGCACCAGAGAGATGAAGGCATAACTAGATTGTCGGGACTGTCAGCCCTCTCCTCCATCACCt-----c
i Chlorocebus_sabaeus.CM001963.2                        C 0 I 141
s Erythrocebus_patas.Contig8                             48779476 250 -  48907691 Atgttctatttggtcttcctccccagttcatggtgcagagctcctaaaactct--tgaaatttcctga----tagggatgagaggaccaccctttactagtcacaagtcccttttag-ccacacctgagtttatgctattggcatgacatgactggtgggctggagacccgc--atagcttcagggcgggtgctgggcaccagagagatgaaggcataactagattgttgggactgtcagccctctcctccatcacct-----c
i Erythrocebus_patas.Contig8                            C 0 I 141
s Gorilla_beringei.k141_111300                               8058 247 -     14630 atgtcctatttggtcttcctccccagttcatggtacagagttcctaaaa--ct--tgaaatttcctga----tagagatgagaggactatcctttactagtcataagttccttttag-ccatacctgagtttatgctattgacatgacatgactggt-ggctacagacccgt--atagcttcagggtgggtgctggacaccagaaagatgaaggcataactagatggttgaaactgtcagccctctcctccgtcacct-----c
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119655158 247 - 195582420 ATGTCCtatttggtcttcctccccagttcatggtacagagttcctaaaa--ct--tgaaatttcctga----tagagatgagaggactatcctttactagtcataagttccttttag-ccatacctgagtttatgctattgacatgacatgactggt-ggctacagacccgt--atagcttcagggtgggtgctggacaccagaaagatgaaggcataactagatggttgaaactgtcagccctctcctccgtcacct-----c
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Hoolock_leuconedys.ctg903                                    12113 232 -     61166 atgtcctatttggtcttcctccccagttcactgtacagagcccctaaaa--ct--tgaaatttcctga----tagagatgagaggaccatcctttactagtcataagtcccttttag-ccatacctgagtttatgctattgacatgacatgagtggt-ggctggagacccgt--agagcttcagggtgggtgctggacaccagaaagatgaaggcctaactagatggttgaaactgtcggcccT--------------------
i Hoolock_leuconedys.ctg903                                I 2119 I 212
s Hylobates_abbotti.k141_1816750                              582 232 +      3202 atgtcctatttggtcttcctccccagttcactgtacagagcccctaaaa--tt--tgaaatttcctga----tagagatgagaggaccatcctttactagtcataagtcccttttag-ccatacctgagtttatgctattgacatgacatgagtggt-ggctggagacccgt--agagcttcagggtgggtgctggacaccagaaagatgaaggcctaactagatggttgaaactgtcggaact--------------------
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1633646                               552 232 -      2102 ATGTCCTGTTTGGTCTTCCTCCCCAGTTCACTGTACAGAGCCCCTAAAA--TT--TGAAATTTCCTGA----TAGAGATGAGAGGACCATCCTTTACTAGTCATAAGTCCCTTTTAG-CCATACCTGAGTTtatgctattgacatgacatgagtggt-ggctggagacccgt--agagcttcagggtgggtgctggacaccagaaagatgaaggcctaactagatggttgaaactgtcggcccT--------------------
i Hylobates_agilis.k141_1633646                         C 0 C 0
s Hylobates_klossii.k141_468230                              2068 232 +      5464 atgtccTATCTGGTCTTCCTCCCCAGTTCACTGTACAGAGCCCCTAAAA--TT--TGAAATTTCCTGA----TAGAGATGAGAGGACCATCCTTTACTAGTCATAAGTCCCTTTTAG-CCATACCTGAGTTtatgctattgacatgacatgagtggt-ggctggagacccat--agagcttcagggtgggtgctggacaccagaaagatgaaggcctaactagatggttgaaactgtcggcccT--------------------
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14627417 232 -  25970782 atgtcctatttggtcttcctccccagttcactgtacagagcccctaaaa--ct--tgaaatttcctga----tagagatgagaggaccatcctttactagtcataagtcccttttag-ccatacctgagtttatgctattgacatgacatgagtggt-ggctggagacccgt--agagcttcagggtgggtgctggacaccagaaagatgaaggcctaactagatggttgaaactgtcggcccT--------------------
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                               0 200 +      4161 --------------------------------GTACAGAGCCCCTAAAA--CT--TGAAATTTCCTGT----TAGAGATGAGAGGACCATCCTTTACTAGTCATAAGTCCCTTTTAG-CCATACCTGAGTTtatgctattgacatgacatgagtggt-ggctggagacccgt--agagcttcagggtgggtgctggacaccagaaagatgaaggcctaactagatggttgaaactgtcggcccT--------------------
i Hylobates_muelleri.k141_1139146                       N 0 C 0
s Lagothrix_lagothricha.k141_12968                          52645 250 -    147782 atgacctattcggtcttcctccacagttcatggtacagagctcctaaaa--ctcttgtaatctcctgaatgatagggatgagaggaccatcctttACTAGTCATAAGTCCCTTTTAG-CCACACCTGAGTTTATGCTGTTAACA-----TGACTAGT-GTCTGGAGACCTGCAGATAATTTCAGGATTGGTACTGGACACCAGAAAGATGAAGACATAACTAGACTGTTGGAACTGTCACCCCTCTCCTCCATCACTG-----G
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lophocebus_aterrimus.ctg55                             19251096 250 +  19376315 Atgttctatttggtcttcctccccagttcatggtgcagagctcctaaaactct--tgaaatttcctga----tagggatgagaggaccaccctttactagtcacaagtcccttttag-ccacacctgagtttatgctattggcatgacatgactggtgggctggagacccgc--atagcttcagggcgggtgctgggtgccagagagatgaaggcataactagattgttgggactgtcagccctctcctccatcacct-----c
i Lophocebus_aterrimus.ctg55                            C 0 I 141
s Macaca_arctoides.k141_2201161                             22847 250 +     74745 Atgttctatttggtcttcctccccagttcatggtgcagagctcctaaaactct--tgaaatttcccaa----tagggatgagaggaccaccctttactagtcacaagtcccttttag-ccacacctgagtttatgctattggcatgacatgactggtgggctggagacccgc--atagcttcagggcgggtgctgggcaccagagagatgaaggcataactagattgttgggactgtcagccctctcctccatcacct-----c
i Macaca_arctoides.k141_2201161                         C 0 I 141
s Macaca_assamensis.Contig65                             12709308 250 +  12821369 Atgttctatttggtcttcctccccagttcatggtgcagagctcctaaaactct--tgaaatttcccaa----tagggatgagaggaccaccctttactagtcacaagtcccttttag-ccacacctgagtttatgctattggcatgacatgactggtgggctggagacccgc--atagcttcagggccggtgctgggcaccagagagatgaaggcataactagattgttgggactgtcagccctctcctccatcacct-----c
i Macaca_assamensis.Contig65                            C 0 I 141
s Macaca_cyclopis.k119_883699                                1882 250 -     26467 Atgttctatttggtcttcctccccagttcatggtgcagagctcctaaaactct--tgaaatttcccga----tagggatgagaggaccaccctttactagtcacaagtcccttttag-ccacacctgagtttatgctattggcatgacatgactggtgggctggagacccgc--atagcttcagggccggtgctgggcaccagagagatgaaggcataactagattgttgggactgtcagccctctcctccatcacct-----c
i Macaca_cyclopis.k119_883699                           C 0 I 141
s Macaca_fascicularis.k141_155037                           49753 250 +     63263 Atgttctatttggtcttcctccccagttcatggtgcagagctcctaaaactct--tgaaatttcccga----tagggatgagaggaccaccctttactagtcacaagtcccttttag-ccacacctgagtttatactattggcatgacatgactggtgggcttgagacccgc--atagcttcagggccggtgctgggcaccagagagatgaaggcataactagattgttgggactgtcagccctctcctccatcacct-----c
i Macaca_fascicularis.k141_155037                       C 0 I 141
s Macaca_fuscata.k119_938422                                 1863 250 -     26361 Atgttctatttggtcttcctccccagttcatggtgcagagctgctaaaactct--tgaaatttcccga----tagggatgagaggaccaccctttactagtcacaagtcccttttag-ccacacctgagtttatgctattggcatgacatgactggtgggctggagacccgc--atagcttcagggcgggtgctgggcaccagagagatgaaggcataactagattgttgggactgtcagccctctcctccatcacct-----c
i Macaca_fuscata.k119_938422                            C 0 I 141
s Macaca_leonina.k141_467472                                 5040 250 -      7381 Atgttctatttggtcttcctccccagttcatggtgcagagctcctaaaactct--tgaaatttcccga----tagggatgagaggaccaccctttactagtcacaagtcccttttag-ccacacctgagtttatgctattggcatgacatgactggtgggctggagacccgc--atagcttcagggcgggtgctgggcaccagagagatgaaggcataactagattgttgggactgtcagccctctcctccatcacct-----c
i Macaca_leonina.k141_467472                            C 0 I 141
s Macaca_maura.k141_251854                                  48278 250 -     79256 Atgttctatttggtcttcctccccagttcatggtgcagagctcctaaaactct--tgaaatttcccga----tagggatgagaggaccaccctttactagtcacaagtcccttttag-ccacacctgagtttatgctattggcatgacatgactggtgggctggagacccgc--atagcttcagggcgggtgctgggcaccagagagatgaaggcataactagattgttgggactgtcagccctctcctccatcacct-----c
i Macaca_maura.k141_251854                              C 0 I 141
s Macaca_mulatta.NC_041755.1                            196038380 250 + 196197964 ATGTTCTATTTggtcttcctccccagttcatggTGCAGAGCTCCTAAAACTCT--TGAAATTTCCCGA----TAGGGATGAGAGGACCACCCTTTACTAGTCACAAGTCCCTTTTAG-ccacacctgagtttatgctatTGGCATGACATGACTGGTGGGCTGGAGACCCGC--ATAGCTTCAGGGCCGGTGCTGGGCACCAGAGAGATGAAGGCATAACTAGATTGTTGGGACTGTCAGCCCTCTCCTCCATCACCt-----c
i Macaca_mulatta.NC_041755.1                            C 0 I 141
s Macaca_nemestrina.KQ004885.1                           11448546 250 +  11645122 ATGTTCTATTTggtcttcctccccagttcatggTGCAGAGCTCCTAAAACTCT--TGAAATTTCCCGA----TAGGGATGAGAGGACCACCCTTTACTAGTCACAAGTCCCTTTTAG-ccacacctgagtttatgctatTGGCATGACATGACTGGTGGGCTGGAGACCCGC--ATAGcttcagggcgggtgctgggcaccagagagatgaaggcataactagattgttgggactgtcagccCTCTCCTCCATCACCt-----c
i Macaca_nemestrina.KQ004885.1                          C 0 I 141
s Macaca_nigra.k141_282495                                   7232 250 -     46448 Atgttctatttggtcttcctccccagttcatggtgcagagctcctaaaactct--tgaaatttcccga----tagggatgagaggaccaccctttactagtcacaagtcccttttag-ccacacctgagtttatgctattggcatgacatgactggtgggctggagacccgc--atagcttcagggcgggtgctgggcaccagagagatgaaggcataactagattgttgggactgtcagccctctcctccatcacct-----c
i Macaca_nigra.k141_282495                              C 0 I 141
s Macaca_radiata.k141_3680256                                4898 250 -     13212 Atgttctatttggtcttcctccccagttcatggtgcagagctcctaaaactct--tgaaatttcccaa----tagggatgagaggaccaccctttactagtcacaagtcccttttag-ccacacctgagtttatgctattggcatgacatgactggtgggctggagacccgc--atagcttcagggcgggtgctgggcaccagagagatgaaggcataactagattgttgggactgtcagccctctcctccatcacct-----c
i Macaca_radiata.k141_3680256                           C 0 I 141
s Macaca_siberu.k141_741907                                 18575 250 -     55006 Atgttctatttggtcttcctccccagttcatggtgcagagctcctaaaactct--tgaaatttcccga----tagggatgagaggaccaccctttactagtcacaagtcccttttag-ccacacctgagtttatgctattggcatgacatgactggtgggctggagacccgc--atagcttcagggcgggtgctgggcaccagagagatgaaggcataactagattgttgggactgtcagccctctcctccatcacct-----c
i Macaca_siberu.k141_741907                             C 0 I 141
s Macaca_silenus.Contig12                                43843681 250 +  43892939 Atgttctatttggtcttcctccccagttcatggtgcagagctcctaaaactct--tgaaatttcccga----tagggatgagaggaccaccctttactagtcacaagtcccttttag-ccacacctgagtttatgctattggcatgacatgactggtgggctggagacccgc--atagcttcagggcgagtgctgggcaccagagagatgaaggcataactagattgttgggactgtcagccctctcctccatcacct-----c
i Macaca_silenus.Contig12                               C 0 I 141
s Macaca_thibetana.k99_662710                               19862 250 -     24607 Atgttctatttggtcttcctccccagttcatggtgcagagctcctaaaactct--tgaaatttcccga----tagggatgagaggaccaccctttactagtcacaagtcccttttag-ccacacctgagtttatgctattggcatgacatgactggtgggctggagacccgc--atagcttcagggccggtgctgggcaccagagagatgaaggcataactagattgttgggactgtcagccctctcctccatcacct-----c
i Macaca_thibetana.k99_662710                           C 0 I 141
s Macaca_tonkeana.k141_2870633                               7229 250 -     27140 Atgttctatttggtcttcctccccagttcatggtgcagagctcctaaaactct--tgaaatttcccga----tagggatgagaggaccaccctttactagtcacaagtcccttttag-ccacacctgagtttatgctattggcatgacatgactggtgggctggagacccgc--atagcttcagggcgggtgctgggcaccagagagatgaaggcataactagattgttgggactgtcagccctctcctccatcacct-----c
i Macaca_tonkeana.k141_2870633                          C 0 I 141
s Mandrillus_leucophaeus.scaffold125                     43440261 250 -  43563597 Atgttctatttggtcttcctccccagttcgtggtgcagagctcctaaaagtct--tgaaatttcctga----tagggatgagaggaccaccctttactagtcacaagtcccttttag-ccacacctgagtttatgctattggcatgacatgactggtgggctggagacccac--atagcttcagggcgggtgctgggcgccagagagatgaaggcataactagattgttgggactgtcagccctctcctccatcacct-----c
i Mandrillus_leucophaeus.scaffold125                    C 0 I 141
s Mandrillus_sphinx.Contig144                             4453076 250 -   4543643 Atgttctatttggtcttcctcccaagttcgtggtgcagagctcctaaaagtct--tgaaatttcctga----tagggatgagaggaccaccctttactagtcacaagtcccttttag-ccacacctgagtttatgctattggcatgacatgactggtgggctggagacccac--atagcttcagggcgggtgctgggcgccagagagatgaaggcataactagattgttgggactgtcagccctctcctccatcacct-----c
i Mandrillus_sphinx.Contig144                           C 0 I 141
s Miopithecus_ogouensis.k141_2935907                         4815 250 +     29742 Atgttctatttggtcttcctccccagttcatggtgcagagctcctaaaactct--tgaaatttcctga----tacggatgagaggaccaccctttactagtcacaagtcccttttag-ccacacctgagttgtggctattggcatcacatgactggtgggctgcagacccgc--agagcttcagggcgggtgctgggcaccagagagatgacggcataactagattgttggcactgtcagccctctcctccatcacct-----c
i Miopithecus_ogouensis.k141_2935907                    C 0 I 141
s Nomascus_annamensis.k141_224620                            1883 232 -      2316 AGGTCCtatttggtcttcctccccagttcactgtacagagcccctaaaa--ct--tgaaatttcctgg----tagagatgagaggaccatcctttactagtcataagtcccttttag-ccatacctgagtttatgctattgacatgacatgagtggt-ggctggagacccgt--agagcttcagggtgggtgctggacaccagaaagatgaaggcctaactagatggttgaaactgtcggcccT--------------------
i Nomascus_annamensis.k141_224620                       C 0 C 0
s Nomascus_concolor.k141_226614                              3980 232 -      5092 AGGTCCtagttggtcttcctccccagttcactgtacagagcccctaaaa--ct--tgaaatttcctgg----tagagatgagaggaccatcctttactagtcataagtcccttttag-ccatacctgagtttatgctattgacatgacatgagtggt-ggctggagacgtgt--agagcttcagggtgggtgctggacaccagaaagatgaaggcctaactagatggttgaaactgtcggcccT--------------------
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_1032971                           1550 232 -      1918 atgtcctatttggtcttcttccccagttcactgtacagagctcctaaaa--ct--tgaaatttcctta----tagagatgagaggaccatcctttactagtcttaagtcccttttag-ccatacctgagtttatgctgttgacatgacatgggtggt-ggctggagacccgt--atagcttcagggtgggtgctggacaccagaaagatgaaggtctaactaggtggttgaaactgtcagcccT--------------------
i Nomascus_gabriellae.k141_1032971                      C 0 C 0
s Nomascus_siki_b.tarseq_80                             27732 232 -  18771707 atgtcctatttggtcttcctccccagttcactgtacagagcccctaaaa--ct--tgaaatttcctga----tagagatgagaggaccatcctttactagtcataagtcccttttag-ccatacctgagtttatgctattgacatgacatgagtggt-ggctggagacccgt--agagcttcagggtgggtgctggacaccagaaagatgaaggcctaactagatggttgaaactgtcggcccT--------------------
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_1035055                                 2293 232 -      3602 AGGTCCtatttggtcttcctccccagttcactgtacagagcccctaaaa--ct--tgaaatttcctgg----tagagatgagaggaccatcctttactagtcataagtcccttttag-ccatacctgagtttatgctattgacatgacatgagtggt-ggctggagacccgt--agagcttcagggtgggtgctggacaccagaaagatgaaggcctaactagatggttgaaactgtcggcccT--------------------
i Nomascus_siki_a.k141_1035055                            C 0 C 0
s Pan_paniscus.CM003386.1                               127577420 247 - 205426864 ATGTCCTATTTGGTCTTCTTCCCCAGTTCATGGTACAGAGTTCCTAAAA--CT--TGAAATTTCCTGA----TAGAGATGAGAGGACCATCCTTTACTAGTCATAAGTCCCTTTTAG-CcatacctgagtttatgctatTGACATGACATGACTGGT-GGCTACAGAcccgt--atagcttcagggtgggtgctggacaccagaaagatgaaggcataactagatggttgaaactgtcagccctCTCCTCCATCACCT-----C
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120154580 247 - 196562556 ATGTCCTATTtggtcttcctccccagttcatggTACAGAGTTCCTAAAA--CT--TGAAATTTCCTGA----TAGAGATGAGAGGACCATCCTTTACTAGTCATAAGTCCCTTTTAG-CcatacctgagtttatgctatTGACATGACATGACTGGT-GGCTACAGACCCGT--atagcttcagggtgggtgctggacaccagaaagatgaaggcataactagatggttgaaactgtcagccctctcctcCATCACCT-----C
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Papio_anubis.CM001492.2                               188159058 250 - 188283584 ATGTTCTATTTggtcttcctccccagttcatggTGCAGAGCTCCTAAAACTCT--TGAAATTTCCTGA----TAGGGATGAGAGGACCACCCTTTACTAGTCACAAGTCCCTTTTAG-CcacacctgagtttatgctatTGGCATGACATGACTGGTGGGCTGGAGACCCGC--ATAGCTTCAGGGCGGGTGCTGGGCGCCAGAGAGATGAAGGCATAACTAGATTGTTGGGACTGTCAGCCCTCTCCTCCATCACCt-----c
i Papio_anubis.CM001492.2                               C 0 I 141
s Papio_cynocephalus.k141_45376                              2148 250 +     25005 Atgttctatttggtcttcctccccagttcatggtgcagagctcctaaaactct--tgaaatttcctga----tagggatgagaggaccaccctttactagtcacaagtcccttttag-ccacacctgagtttatgctattggcatgacatgactggtgggctggagacccgc--atagcttcagggcgggtgctgggcaccagagacatgaaggcataactagattgttgggactgtcagccctctcctccatcacct-----c
i Papio_cynocephalus.k141_45376                         C 0 I 141
s Papio_hamadryas.Contig15                               47516430 250 +  47705337 Atgttctatttggtcttcctccccagttcatggtgcagagctcctaaaactct--tgaaatttcctga----tagggatgagaggaccaccctttactagtcacaagtcccttttag-ccacacctgagtttatgctattggcatgacatgactggtgggctggagacccgc--atagcttcagggcgggtgctgggcaccagagacatgaaggcataactagattgttgggactgtcagccctctcctccatcacct-----c
i Papio_hamadryas.Contig15                              C 0 I 141
s Papio_kindae.k141_5458022                                 70421 250 -    104429 Atgttctatttggtcttcctccccagttcatggtgcagagctcctaaaactct--tgaaatttcctga----tagggatgagaggaccaccctttactagtcacaagtcccttttag-ccacacctgagtttatgctattggcatgacatgactggtgggctggagacccgc--atagcttcagggcgggtgctgggcgccagagagatgaaggcataactagattgttgggactgtcagccctctcctccatcacct-----c
i Papio_kindae.k141_5458022                             C 0 I 141
s Papio_papio.k141_979496                                    8953 250 +     14967 Atgttctatttggtcttcctccccagttcatggtgcagagctcctaaaactct--tgaaatttcctga----tagggatgagaggaccaccctttactagtcacaagtcccttttag-ccacacctgagtttatgctattggcatgacatgactggtgggctggagacccgc--atagcttcagggcggatgctgggcaccagagacatgaaggcataactagattgttgggactgtcagccctctcctccatcacct-----c
i Papio_papio.k141_979496                               C 0 I 141
s Papio_ursinus.k141_1345919                                 4818 250 -      7628 Atgttctatttggtcttcctccccagttcatggtgcagagctcctaaaactct--tgaaatttcctga----tagggatgagaggaccaccctttactagtcacaagtcccttttag-ccacacctgagtttatgctattggcatgacatgactggtgggctggagacccgc--atagcttcagggcgggtgctgggcaccagagacatgaaggcataactagattgttgggactgtcagccctctcctccatcacct-----c
i Papio_ursinus.k141_1345919                            C 0 I 141
s Pongo_abelii.NDHI03003816.1                              189939 247 -    373494 ATGTCCTATTtggtcttcctccccagttcacgGTACAGAGTTCCTAAAA--CT--TGAAATTTCCTGA----TAGAGATGAGAGGACCATCCTTTACTATTCATAAGTTCCTTTTAG-CcatacctgagtttatgctaTTGACATGACATGACTGGT-GGCTAGAGACCCGT--ATAGCTTCAGGGTGGGTACTGGACACCAGAAAGATGAAGGCATAACTAGACGTTTGGAACTGTCAGCCCTCTCCTCCATCACCT-----C
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19810586 247 +  19899266 atgtcctatttggtcttcctccccagttcacggtacagagttcctaaaa--ct--tgaaatttcctga----tagagatgaggggaccatcctttactattcataagttccttttag-ccatacctgagtttatgctattgacatgacatgactggt-ggctagagacccgt--atagcttcagggtgggtactggacaccagaaagatgaaggcataactagacgtttggaactgtcagccctctcctccatcacct-----c
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15675211 250 -  43202129 ATAACCTATTTGGTCTTCCTTCCCAGTTCATGGTacagagctcctaaaa--ctctTGTAATCTCCTGAATGACAGGGATGAGAGGGCCATCCTTTACTAGTCATAAGTCCCTTTGAA-CCATACCTAAGTTTAtgctattgata-----tgactAgt-gtctggagacctgtagatggtttcaggataggtactggacaccagaaagaTGAAGGCATAACTAGATTGTTGGAACTGTCACCCCTCTCCTCCATCactg-----g
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        7124 250 +     34089 ataacctatttggtcttccttcccagttcatggtacagagctcctaaaa--ctcttgtaatctcctgaatgacagggatgagaggaccatcctttACTAGTCATAAGTCCCTTTGAA-CCATACCTAAGTTtatgctattgata-----tgactagt-gtctggagacctgtagatagtttcaggataggtactggacaccataaagatgaaggcataactagattgttggaactgtcacccctctcctccatcactg-----g
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              7066 250 -     60842 ataacctatttggtcttccttcccagttcatggtacagagctcctaaaa--ctcttgtaatctcctgaatgacagggatgagaggaccatcctttACTAGTCATAAGTCCCTTTGAA-CCATACCTAAGTTtatgctattgata-----tgactagt-gtctggagacctgtagatagtttcaggataggtactggacaccagaaagatgaaggcataactagattgttggaactgtcacccctctcctccatcactg-----g
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              7159 250 +     67014 ataacctatttggtcttccttcccagttcatggtacagagctcctaaaa--ctcttgtaatctcctgaatgacagggatgagaggaccatcctttACTAGTCATAAGTCCCTTTGAA-CCATACCTAAGTTtatgctattgata-----tgactagt-gtctggagacctgtagatagtttcaggataggtactggacaccataaagatgaaggcataactagattgttggaactgtcacccctctcctccatcactg-----g
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              7137 250 +     60816 ataacctatttggtcttccttcccagttcatggtacagagctcctaaaa--ctcttgtaatctcctgaatgacagggatgagaggaccatcctttACTAGTCATAAGTCCCTTTGAA-CCATACCTAAGTTtatgctattgata-----tgactagt-gtctggagacctgtagatagtttcaggataggtactggacaccataaagatgaaggcataactagattgttggaactgtcacccctctcctccatcactg-----g
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 7074 250 -     76454 ataacctatttggtcttccttcccagttcatggtacagagctcctaaaa--ctcttgtaatctcctgaatgacagggatgagaggaccatcctttACTAGTCATAAGTCCCTTTGAA-CCATACCTAAGTTtatgctattgata-----tgactagt-gtctggagacctgtagatagtttcaggataggtactggacaccagaaagatgaaggcataactagattgttggaactgtcacccctctcctccatcactg-----g
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17343805 250 -  30362882 atgacctatttggtcttcctccccagttcatggtacacagctcctaaaa--ctcttgtaatctcctgaatgatagggatgagagggccttcctttACTAGTCATAAGTGCCTTTTCG-ATATACCTGAGTTtatgctattgaca-----tgactatt-gtctgaagacctgtaggtagtttcatgataggtactggaaaccagaaaaataaaggcataactagactgttggaactgtcacacctctcctccgtcactg-----g
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         23166 250 -     62485 atgacctatttggtcttcctccccagttcatggtacacagctcctaaaa--ctcttgtaatctcctgaatgatagggatgagagggccttcctttACTAGTCATAAGTGCCTTTTCG-ATATACCTGAGTTtatgctattgaca-----tgactatt-gtctgaagacctgtaggtagtttcatgataggtactggaaaccagaaaaataaaggcataactagactgttggaactgtcacaccactcctccgtcactg-----g
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        17677 232 -  13920577 atgtcctatttggtcttcctccccagttcactgtacagagcccctaaaa--ct--tgaaatttcctga----tagagatgagaggaccatcctttactagtcataagtcccttttag-ccatacctgagtttatgctattgacatgacatgagtggt-ggctggagacccgt--agagcttcagggtgggtgctggacaccagaaagatgaaggcctaactagatggttgaaactgtcggcccT--------------------
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Theropithecus_gelada.CM009951.1                       194010590 250 - 194193292 ATGTTCTATTTggtcttcctccccagttcatggTGCAGAGCTCCTAAAACTCT--TGAAATTTCCTGA----TAGGGATGAGAGGACCACCCTTTACTAGTCACAAGTCCCTTTTAG-CcacacctgagtttatgctatTGGCATGACATGACTGGTGGGCTGGAGACCCGC--AGAGCTTCAGGGCGGGTGCTGGGTGCCAGAGAGATGAAGGCATAACTAGATTGTTGGGACTGTCAGCCCTCTCCTCCATCACCt-----c
i Theropithecus_gelada.CM009951.1                       C 0 I 141
e Eptesicus_fuscus.JH977687.1                             4708429 237 +   6522550 I
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590  76 -     47444 I
e Petromus_typicus.PetTyp_scaffold_33007                    16921   0 -     36578 C
e Sorex_araneus.JH798170.1                               17769647   0 -  27805282 C
e Dinomys_branickii.DinBra_scaffold_1996                   158442 1030 +    228994 I
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           4051 456 -      6963 I
e Oryctolagus_cuniculus.CM000803.1                      141878516 2929 + 163896628 I
e Ochotona_princeps.JH802095.1                            4996729 2205 -  23139505 I
e Lepus_americanus.LepAme_scaffold_62849                    15480 2946 +     22452 I
e Perognathus_longimembris.PerPac_flattened_line_19359       1614  38 +     49596 I
e Dipodomys_stephensi.DipSte_scaffold_84338                  1789  28 -     11986 I
e Dipodomys_ordii.KN672545.1                              3659429  30 +   4240102 I
e Suricata_suricatta.SurSur_flattened_line_20339            32401   0 +     62062 C
e Ziphius_cavirostris.ZipCav_flattened_line_60625            1538   2 -     13665 I
e Zalophus_californianus.ZalCal_flattened_line_4097        219280   0 -    227762 C
e Vulpes_lagopus.VulLag_flattened_line_2045                143835   0 -    281493 C
e Vicugna_pacos.KN269600.1                                1527832   0 -   2331223 C
e Ursus_maritimus.KK498671.1                              6519892   0 +  28682327 C
e Uropsilus_gracilis.UroGra_scaffold_69449                   9768   0 +     10241 C
e Tursiops_truncatus.MRVK01000923.1                      69316794   2 -  96451834 I
e Trichechus_manatus.JH594618.1                          16088878   0 +  31416278 C
e Tragulus_javanicus.TraJav_scaffold_14717                   9149   2 +     90398 I
e Tonatia_saurophila.TonSau_scaffold_3334                  137563 275 -    259118 I
e Tapirus_terrestris.TapTer_scaffold_14939                  61041   0 +     99546 C
e Tapirus_indicus.TapInd_scaffold_176                      810399   0 +   1148477 C
e Tamandua_tetradactyla.TamTet_scaffold_26877               16259 379 +     45698 I
e Tadarida_brasiliensis.TadBra_scaffold_61492                1822 242 +     20549 I
e Sus_scrofa.CM000824.4                                 189273670 1086 + 218635234 I
e Spilogale_gracilis.SpiGra_flattened_line_905             238244   0 -    276980 C
e Solenodon_paradoxus.SolPar_flattened_line_1012            23185   0 +    739146 C
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   39231   0 -    114521 C
e Saiga_tatarica.SaiTat_scaffold_1069354                      105   0 -       709 C
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Rhinolophus_sinicus.LVEH01000179.1                      1792212   2 +   2252614 I
e Rangifer_tarandus.RanTarSib_scaffold_24239                20109   0 +     68503 C
e Puma_concolor.QAVW01000427.1                          131539433   0 - 161321710 C
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Pteronura_brasiliensis.PteBra_flattened_line_1343        249686   0 -    344369 C
e Pteronotus_parnellii.KE867983.1                            5588 252 -     27784 I
e Procavia_capensis.ProCapCap_scaffold_11797                50321   0 -     88779 C
e Platanista_gangetica.PlaMin_flattened_line_72990           8998   2 +     21690 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Phocoena_phocoena.PhoPho_flattened_line_53071              2530   2 +      8220 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    120818   0 -    135482 C
e Pantholops_hodgsonii.KE114631.1                         1071126   0 -   1292953 C
e Panthera_tigris.KE721879.1                              5032785   0 -   6340057 C
e Panthera_pardus.KV860323.1                              3643137   0 +  18214204 C
e Panthera_onca.PanOnc_flattened_line_1615                  39322   0 +    295523 C
e Ovis_canadensis.OviCan_scaffold_6251                      83485   0 +    140051 C
e Ovis_aries.CM001582.2                                 134082257   0 - 275406953 C
e Otocyon_megalotis.JAEUCK010005121.1                      314612   0 -    505867 C
e Orycteropus_afer.OryAfe_flattened_line_13509              63439   0 -     66828 C
e Orcinus_orca.KB316965.1                                 7228065   2 -   7562323 I
e Okapia_johnstoni.LVCL01S0017931.1                         41334   0 +     78940 C
e Odocoileus_virginianus.KZ101650.1                       1083245   0 +   1425656 C
e Odobenus_rosmarus.KB229369.1                             684428   0 -   3126709 C
e Nyctereutes_procyonoides.CAJHUB010000786.1                37467   0 +   3668941 C
e Noctilio_leporinus.NocLep_scaffold_12062                  50214  77 +     94413 I
e Neophocaena_asiaeorientalis.KZ688543.1                  3954389   2 -   4490290 I
e Neomonachus_schauinslandi.NINY01007774.1                4489721   0 -  14209539 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             6589 379 -      8794 I
e Myotis_myotis.MyoMyo_scaffold_6123                        13515 236 +     66751 I
e Myotis_lucifugus.GL429887.1                             3468272 238 -   3747815 I
e Myotis_davidii.KB114863.1                               5022194 233 +   6462685 I
e Myotis_brandtii.KE161952.1                               970769 237 +   8389877 I
e Mustela_putorius.JH417978.1                             4427567   0 -  28371801 C
e Murina_feae.MurFea_scaffold_2254                          23900 236 -    100666 I
e Mungos_mungo.MunMun_flattened_line_8729                  149746   0 -    168139 C
e Moschus_moschiferus.MosMos_scaffold_78805                  5813   0 -     19904 C
e Mormoops_blainvillei.MorMeg_scaffold_2952                162937 259 +    265003 I
e Monodon_monoceros.MonMon_M_scaffold_5598                 149798   2 +    154973 I
e Mirounga_angustirostris.MirAng_flattened_line_8852        16322   0 -    104932 C
e Miniopterus_schreibersii.MinSch_scaffold_24116            36998 214 +     45743 I
e Miniopterus_natalensis.LDJU01000022.1                   8212509 213 +  10048721 I
e Micronycteris_hirsuta.MicHir_scaffold_37978               24387 274 -     32043 I
e Microgale_talazaci.MicTal_scaffold_34660                  40768   0 -     48017 C
e Mesoplodon_bidens.MesBid_scaffold_96348                    2003   2 -     12939 I
e Mellivora_capensis.MelCap_flattened_line_15433             5726   0 -     87323 C
e Megaderma_lyra.MegLyr_scaffold_3562                       65026   2 -    234502 I
e Manis_pentadactyla.KN017078.1                             39380   0 +     58827 C
e Manis_javanica.JSZB01003966.1                            149232   0 +    252755 C
e Lycaon_pictus.CM007556.1                               11094608   0 +  39895028 C
e Loxodonta_africana.GL010040.1                          20597894   0 -  62548349 C
e Lipotes_vexillifer.KE558548.1                            139369   2 +   3060487 I
e Leptonychotes_weddellii.KB714749.1                      3090826   0 -   3498232 C
e Lasiurus_borealis.LasBor_scaffold_59542                    5042 241 +     26176 I
e Kogia_breviceps.KogBre_flattened_line_35920               26998   2 +     37189 I
e Inia_geoffrensis.IniGeo_flattened_line_66725              12417   2 +     17520 I
e Hyaena_hyaena.HyaHya_flattened_line_20729                 22640   0 -     67322 C
e Hipposideros_galeritus.HipGal_scaffold_52959                377   2 +     26078 I
e Hipposideros_armiger.JXIK01001085.1                      282608   2 -    477199 I
e Hippopotamus_amphibius.HipAmp_scaffold_1308              150208   0 +    277961 C
e Heterohyrax_brucei.HetBruBak_scaffold_13814               68359   0 -    108006 C
e Hemitragus_hylocrius.HemHyl_scaffold_16669                32467   0 -     91191 C
e Helogale_parvula.HelPar_flattened_line_22962              22066   0 +     53719 C
e Giraffa_tippelskirchi.LVKQ01S012154.1                    185599   0 -    189561 C
e Felis_nigripes.FelNig_flattened_line_8080                 26394   0 +     52776 C
e Felis_catus_fca126.CM031420.1                         129285299   0 - 158578461 C
e Eubalaena_japonica.EubJap_flattened_line_7756             64881   0 +     89355 C
e Eschrichtius_robustus.EscRob_flattened_line_685          318424   0 +    330699 C
e Equus_przewalskii.ATBW01073585.1                          16166   0 +     92910 C
e Equus_caballus.CM000402.2                              13354676   0 +  41866177 C
e Equus_asinus.JREZ01000062.1                             5856176   0 -   7175178 C
e Enhydra_lutris.KZ291749.1                              85876835   0 +  99434291 C
e Elephantulus_edwardii.JH947210.1                        7830035 1277 +  15467074 I
e Elaphurus_davidianus.JRFZ01086400.1                     1495795   0 +   1727528 C
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Echinops_telfairi.JH980316.1                           22999931   2 -  44670279 I
e Diceros_bicornis.DicBicMic_scaffold_9545                   6452   0 +    151128 C
e Dicerorhinus_sumatrensis.PEKH010003161.1                 325812   0 +    993696 C
e Desmodus_rotundus.KZ672188.1                           18700517 262 -  18957592 I
e Delphinapterus_leucas.KZ290064.1                       80040207   0 -  96802777 C
e Dasypus_novemcinctus.JH568778.1                          185121 383 -   6883506 I
e Cryptoprocta_ferox.CryFer_flattened_line_19014            56919   0 -     70449 C
e Crocidura_indochinensis.CroInd_scaffold_27484              1226   0 -     22648 C
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1337   2 -      5782 I
e Condylura_cristata.JH655880.1                          60621791   0 +  78930452 C
e Choloepus_hoffmanni.KN194586.1                           763329 503 +    964067 I
e Choloepus_didactylus.ChoDid_scaffold_36182                18024 504 -     21363 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_160623         6920   0 -      9338 C
e Catagonus_wagneri.CatWag_scaffold_1305                   162277   0 -    276539 C
e Carollia_perspicillata.CarPer_scaffold_4436               61226 261 +     67245 I
e Capra_hircus.CM004562.1                               135711414   0 - 157403528 C
e Capra_aegagrus.CM003214.1                              21330197   0 + 157394656 C
e Canis_lupus_orion.HG994411.1                           16461937   0 -  44759192 C
e Canis_lupus_familiaris.chr31                           11095152   0 +  39895921 C
e Canis_lupus_dingo.QKWQ01001993.1                       11272441   0 -  35597290 C
e Canis_lupus_VD.CanFam_VD_scaffold_16982                   20732   0 +     87036 C
e CanFam4.chr31                                          11525758   0 +  39901454 C
e Camelus_ferus.KB016973.1                                2976160   0 +   6889770 C
e Camelus_dromedarius.KN271192.1                           400424   0 -  15254737 C
e Camelus_bactrianus.KN276303.1                           3222722   0 -   8989139 C
e Bubalus_bubalis.KI419065.1                               674242   0 +   1914593 C
e Bos_taurus.CM000177.6                                  22664479   0 + 158972876 C
e Bos_mutus.JH883513.1                                     418090   0 +    998990 C
e Bos_indicus.CM003021.1                                 22955825   0 + 161108492 C
e Bison_bison.KN264915.1                                   301727   0 -   6870073 C
e Beatragus_hunteri.BeaHun_scaffold_21644                   47579   0 -     72089 C
e Balaenoptera_bonaerensis.DF502048.1                        8754   0 -     13118 C
e Balaenoptera_acutorostrata.KI537095.1                  26383581   0 +  51448160 C
e Artibeus_jamaicensis.ArtJam_scaffold_41619                10440 261 -     29036 I
e Antilocapra_americana.AntAmePen_scaffold_27338             2548   0 +     55446 C
e Anoura_caudifer.AnoCau_scaffold_422                      392020 257 -    631301 I
e Ammotragus_lervia.NIVO01013474.1                        3525117   0 +   4113121 C
e Ailurus_fulgens.LNAC01000003.1                          7099380   0 -  16596857 C
e Ailuropoda_melanoleuca.LNAT01000321.1                  10662594   0 +  23371972 C
e Acinonyx_jubatus.LLWD01000356.1                         2038912   0 +   3721120 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           20901   0 -    119109 C
e Glis_glis.GliGli_scaffold_79770                           15993   0 -     18683 C
e Zapus_hudsonius.ZapHud_scaffold_64392                     20218   0 -     20485 C
e Jaculus_jaculus.JH725517.1                              8577088   0 +  11848649 C
e Hylobates_pileatus_a.tarseq_592                             35692  75 -     60944 I
e Allactaga_bullata.AllBul_scaffold_70162                   21404   0 -     22067 C
e Galeopterus_variegatus.GalVar_scaffold_354               159184   0 +    324696 C
e Microtus_ochrogaster.CM001673.1                        22823881   0 -  98408828 C
e Xerus_inauris.XerIna_scaffold_7898                       128400 2868 -    134049 I
e Varecia_variegata.k141_775891                             27530   0 -     33872 C
e Varecia_rubra.k141_432109                                  7995   0 -     20643 C
e Tupaia_tana.TupTan_flattened_line_68454                    9338   0 +     13056 C
e Tupaia_chinensis.KB320831.1                             2797404   0 -   3938065 C
e Trachypithecus_pileatus.k141_1022309                       5226   0 +     13828 C
e Trachypithecus_phayrei.ctg3                            44662914   0 -  44834318 C
e Trachypithecus_obscurus.k141_1115109                       8130   0 -     28054 C
e Trachypithecus_melamera.k141_699241                        2986   0 -     24393 C
e Trachypithecus_leucocephalus.k141_381681                   3005   0 +     12481 C
e Trachypithecus_laotum.k141_760702                          4719   0 +     14371 C
e Trachypithecus_hatinhensis.k141_504423                     6067   0 -     15592 C
e Trachypithecus_germaini.k141_868450                        3883   0 -     11566 C
e Trachypithecus_geei.k141_670367                           46082   0 -     54611 C
e Trachypithecus_francoisi.k141_768164                       4689   0 -     14244 C
e Trachypithecus_cristatus.k141_1011511                      5261   0 -     12939 C
e Trachypithecus_crepusculus.k141_1588528                   23360   0 -     32910 C
e Trachypithecus_auratus.k141_738098                        29800   0 +     38948 C
e Tarsius_wallacei.k141_48636                               60532 3805 +     65473 I
e Tarsius_lariang.k141_609102                               27216 3812 +     42269 I
e Spermophilus_dauricus.KZ294190.1                        2243603   0 +   2842873 C
e Sigmodon_hispidus.SigHis_scaffold_11332                  104689   0 -    120886 C
e Semnopithecus_vetulus.k141_1143185                        16479   0 +     30600 C
e Semnopithecus_schistaceus.k141_387461                     33457   0 +     42640 C
e Semnopithecus_priam.k141_410937                           40312   0 +     46263 C
e Semnopithecus_johnii.k141_785014                         121532   0 +    130994 C
e Semnopithecus_hypoleucos.k141_761524                      11528   0 +     20762 C
e Semnopithecus_entellus.k141_1572367                        6153   0 +     15331 C
e Rhinopithecus_strykeri.ctg4                            44859307   0 -  45163003 C
e Rhinopithecus_bieti.k119_554384                            2917   0 -     17045 C
e Rattus_norvegicus.chr11                                13917336   0 +  90463843 C
e Pygathrix_nigripes_a.k141_101123                             8537   0 +     18040 C
e Pygathrix_nigripes_b.ctg79                                 6809148   0 +   6970761 C
e Pygathrix_cinerea.k141_374971                             32651   0 +     56732 C
e Psammomys_obesus.NESX01026517.1                           37921   0 +     77221 C
e Propithecus_verreauxi.k141_158021                         42002   0 -     48185 C
e Propithecus_tattersalli.k141_907138                       19738   0 -     53241 C
e Propithecus_perrieri.k141_7554                            20103   0 +     27322 C
e Propithecus_edwardsi.k141_1317105                         38180   0 -     44753 C
e Propithecus_diadema.k141_577245                           45793   0 +     52369 C
e Propithecus_coronatus.k141_1353159                         6446   0 +     11805 C
e Propithecus_coquerelli.NW_012147863.1                     20390   0 -     30946 C
e Prolemur_simus.MPIZ01000048.1                           6851355   0 +  12164890 C
e Presbytis_mitrata.k141_860013                              8661   0 +     14865 C
e Presbytis_comata.k141_672698                               8546   0 -     15069 C
e Plecturocebus_moloch.k141_890597                          25717   0 -     75465 C
e Plecturocebus_miltoni.k141_841561                         15130   0 +    134592 C
e Plecturocebus_hoffmannsi.k141_985533                       3215   0 -    119457 C
e Plecturocebus_grovesi.k141_242819                         25407   0 +    152463 C
e Plecturocebus_dubius.k141_3565563                          6053   0 -     55515 C
e Plecturocebus_cupreus.k141_1145860                         1970   0 -     43940 C
e Plecturocebus_cinerascens.k141_744510                     25334   0 +    147771 C
e Plecturocebus_caligatus.k141_2539816                      15734   0 -     98129 C
e Plecturocebus_brunneus.k141_498086                        25495   0 +     67491 C
e Plecturocebus_bernhardi.k141_959214                       25282   0 +     44506 C
e Pithecia_vanzolinii.k141_831006                           15424   0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514   0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521   0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292   0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093   0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038   0 +     78826 C
e Pithecia_albicans.k141_991845                             45662   0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000036.1               26743271   0 +  26888534 C
e Piliocolobus_kirkii.k141_929665                            4788   0 +      7694 C
e Piliocolobus_gordonorum.k141_1270531                       5421   0 -     17985 C
e Piliocolobus_badius.k141_1987485                           4802   0 -      5908 C
e Peromyscus_maniculatus.KI615518.1                       4955125   0 -   8017169 C
e Perodicticus_potto.k141_1136815                           10207   0 +     61070 C
e Perodicticus_ibeanus.k141_117958                           9080   0 -     23713 C
e Otolemur_garnettii.GL873528.1                          18011493   0 -  38779656 C
e Otolemur_crassicaudatus.k141_505435                        3512   0 -     53940 C
e Onychomys_torridus.OnyTor_scaffold_12578                  42756   0 +     62360 C
e Ondatra_zibethicus.OndZib_scaffold_6821                  130071   0 +    145789 C
e Octodon_degus.JH651621.1                                3687420 1881 +  10294119 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65678347   0 +  89412551 C
e Nycticebus_coucang.k141_771591                            13545   0 +     16181 C
e Nycticebus_bengalensis.LG16                            65570136   0 -  95554990 C
e Nasalis_larvatus.k141_153429                              11264   0 +     48152 C
e Nannospalax_galili.KL201303.1                            119867   0 +    362372 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     91920 1922 -    117718 I
e Muscardinus_avellanarius.MusAve_scaffold_9643             14525   0 +     98495 C
e Mus_spretus.CM004110.1                                 74336277   0 +  97876770 C
e Mus_pahari.LT608305.1                                  67559927   0 +  89017189 C
e Mus_musculus.chr16                                     75493550   0 +  98207768 C
e Mus_caroli.LT608236.1                                  70771497   0 +  92629107 C
e Mirza_zaza.k141_593947                                     4089   0 -     12809 C
e Microcebus_murinus.CM007691.1                          16513035   0 +  47401472 C
e Mesocricetus_auratus.KB708139.1                         1051192   0 -  26018355 C
e Meriones_unguiculatus.MerUng_scaffold_52233               15570   0 +     15977 C
e Marmota_marmota.CZRN01000005.1                         36877588   0 +  64221397 C
e Loris_tardigradus.ctg97                                 3781302   0 +   6799190 C
e Loris_lydekkerianus.k141_550999                           13563   0 +     84689 C
e Lepilemur_septentrionalis.k141_710646                      1084   0 -     13103 C
e Lepilemur_ruficaudatus.k141_574529                        35037   0 -     38897 C
e Lepilemur_dorsalis.k141_134267                            56656   0 +     63517 C
e Lepilemur_ankaranensis.k141_884009                        27292   0 +     39228 C
e Lemur_catta.scaffold_1                                258409979   0 - 285822530 C
e Indri_indri.k141_2197838                                    116   0 +      3484 C
e Ictidomys_tridecemlineatus.JH393315.1                   7129728   0 +  13083262 C
e Hystrix_cristata.HysCri_scaffold_50788                     7688 1865 +     22540 I
e Heterocephalus_glaber.JH602058.1                        2560252   0 +  31725842 C
e Hapalemur_occidentalis.k141_797938                        48308   0 -     54384 C
e Hapalemur_meridionalis.k141_186231                        31681   0 -     42470 C
e Hapalemur_griseus.k141_1387522                             8432   0 +     56096 C
e Hapalemur_gilberti.k141_279011                             3105   0 -     11661 C
e Hapalemur_alaotrensis.k141_1280836                         4627   0 +     10286 C
e Graphiurus_murinus.GraMur_scaffold_4493                   79386   0 +    118900 C
e Galagoides_demidoff.k141_1769638                          13144   0 +     27357 C
e Galago_senegalensis.k141_964197                           16038   0 -     43889 C
e Galago_moholi.ctg555                                     213680   0 -    847004 C
e Fukomys_damarensis.KN123630.1                          13895732   0 -  19261668 C
e Eulemur_sanfordi.k141_186399                              18623   0 -     29447 C
e Eulemur_rufus.k141_1620292                                35891   0 +     46535 C
e Eulemur_rubriventer.k141_411740                           21157   0 +     26808 C
e Eulemur_mongoz.k141_825972                                18693   0 +     27497 C
e Eulemur_macaco.k141_747087                                 2027   0 -     19505 C
e Eulemur_fulvus.k141_653297                                14043   0 +    109717 C
e Eulemur_flavifrons.k141_903901                            10560   0 +     60246 C
e Eulemur_coronatus.k141_3240342                            14235   0 +     36558 C
e Eulemur_collaris.k141_1015201                              1102   0 -      4292 C
e Eulemur_albifrons.k141_715837                              7832   0 +     13586 C
e Ellobius_talpinus.LOJH01198462.1                           1213   0 -      1901 C
e Ellobius_lutescens.LOEQ01003611.1                        243471   0 -    369425 C
e Dolichotis_patagonum.DolPat_scaffold_14102                39604   0 -     73477 C
e Daubentonia_madagascariensis.ctg11                     16847687   0 +  31942871 C
e Dasyprocta_punctata.DasPun_flattened_line_634             61584   0 -    236241 C
e Cuniculus_paca.CunPac_flattened_line_16637                20446   0 +     26546 C
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 32592 1717 -     67205 I
e Ctenodactylus_gundi.CteGun_scaffold_447                  213664   0 -    956709 C
e Cricetulus_griseus.LT883672.1                          53034667   0 +  72327488 C
e Cricetomys_gambianus.CriGam_scaffold_949                 282297   0 -    399297 C
e Colobus_polykomos.k141_1406057                            19335   0 +     23629 C
e Colobus_guereza.LG08                                  147667351   0 + 156195979 C
e Colobus_angolensis.KN985967.1                          10889423   0 +  10971483 C
e Chinchilla_lanigera.JH721867.1                         15963245 964 +  43084221 I
e Cheirogaleus_medius.k141_133808                           10871   0 +     13308 C
e Cheirogaleus_major.k141_1157592                           61827   0 -     68416 C
e Cephalopachus_bancanus.k141_702587                         8788 3391 +     21754 I
e Cavia_tschudii.CavTsc_scaffold_488                       177725 1742 +    436027 I
e Cavia_porcellus.DS562889.1                             15799553 1742 -  24440124 I
e Cavia_aperea.AVPZ01000278.1                            15787615 1741 -  24422027 I
e Carlito_syrichta.NW_007248099.1                          309764 3411 +    345090 I
e Avahi_peyrierasi.k141_798820                               3156   0 +      6337 C
e Avahi_laniger.k141_2840928                                 9540   0 -     16375 C
e Arctocebus_calabarensis.k141_587554                        4710   0 +      9265 C
e Acomys_cahirinus.AcoCah_scaffold_1625                    117433   0 -    189883 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               16591 5 +    209709 tgagg
s Allenopithecus_nigroviridis.k141_2469532                   4458 5 -     60446 tgagg
i Allenopithecus_nigroviridis.k141_2469532              I 141 C 0
s Allochrocebus_lhoesti.k141_3566948                         5176 5 -     29318 tgagg
i Allochrocebus_lhoesti.k141_3566948                    I 141 C 0
s Allochrocebus_preussi.k141_1108977                         4114 5 +     38766 tgagg
i Allochrocebus_preussi.k141_1108977                    I 141 C 0
s Allochrocebus_solatus.k141_371672                          5069 5 -     80423 tgagg
i Allochrocebus_solatus.k141_371672                     I 141 C 0
s Alouatta_belzebul.k141_165776                             16282 5 +     19426 aaagg
i Alouatta_belzebul.k141_165776                         C 0 I 187
s Alouatta_caraya.k141_664908                                1834 5 -     12443 aaagg
i Alouatta_caraya.k141_664908                           C 0 I 187
s Alouatta_discolor.k141_2476351                             1557 5 +     41985 aaagg
i Alouatta_discolor.k141_2476351                        C 0 I 187
s Alouatta_juara.k141_2534995                                3311 5 +      4011 AAAGG
i Alouatta_juara.k141_2534995                           C 0 I 187
s Alouatta_macconnelli.k141_2318944                          1633 5 -     24210 aaagg
i Alouatta_macconnelli.k141_2318944                     C 0 I 187
s Alouatta_nigerrima.k141_2187093                           28215 5 -     30219 aaagg
i Alouatta_nigerrima.k141_2187093                       C 0 I 187
s Alouatta_palliata.k141_2378775                              274 5 +      5328 aaagg
i Alouatta_palliata.k141_2378775                        C 0 I 177
s Alouatta_puruensis.k141_398195                            44405 5 +     45367 aaagg
i Alouatta_puruensis.k141_398195                        C 0 I 187
s Alouatta_seniculus.k141_790278                             3324 5 -      9835 AAAGG
i Alouatta_seniculus.k141_790278                        C 0 I 187
s Aotus_azarae.k141_3170768                                 65263 5 +     78111 agggg
i Aotus_azarae.k141_3170768                             C 0 I 154
s Aotus_griseimembra.k141_3275623                            8219 5 +     22701 agagg
i Aotus_griseimembra.k141_3275623                       C 0 I 144
s Aotus_nancymaae.KZ196176.1                              5752167 5 +   9889416 agggg
i Aotus_nancymaae.KZ196176.1                            C 0 I 154
s Aotus_trivirgatus.k141_1740727                             8760 5 -    104377 agagg
i Aotus_trivirgatus.k141_1740727                        C 0 I 159
s Aotus_vociferans.k141_718647                               8767 5 +     23246 agagg
i Aotus_vociferans.k141_718647                          C 0 I 159
s Ateles_geoffroyi_b.tarseq_2582                             9542022 5 +  39197703 aaagg
i Ateles_geoffroyi_b.tarseq_2582                           C 0 I 190
s Ateles_belzebuth.k141_1348307                             63295 5 +     85812 aaagg
i Ateles_belzebuth.k141_1348307                         C 0 I 190
s Ateles_chamek.k141_1072810                                14308 5 +     89302 aaagg
i Ateles_chamek.k141_1072810                            C 0 I 190
s Ateles_geoffroyi_a.k141_1300742                             18809 5 -     58268 AAAGG
i Ateles_geoffroyi_a.k141_1300742                         C 0 I 190
s Ateles_marginatus.k141_899112                             66803 5 +    119057 aaagg
i Ateles_marginatus.k141_899112                         C 0 I 190
s Ateles_paniscus.k141_1631200                               8772 5 -     25888 AAAGG
i Ateles_paniscus.k141_1631200                          C 0 I 190
s Cacajao_ayresi.k141_724503                               116672 5 -    171031 AGAGG
i Cacajao_ayresi.k141_724503                            C 0 I 194
s Cacajao_calvus.k141_96166                                 15697 5 +    125063 agagg
i Cacajao_calvus.k141_96166                             C 0 I 189
s Cacajao_hosomi.k141_303789                                17744 5 -    216513 AGAGG
i Cacajao_hosomi.k141_303789                            C 0 I 189
s Cacajao_melanocephalus.k141_1160263                       10287 5 -    134917 AGAGG
i Cacajao_melanocephalus.k141_1160263                   C 0 I 189
s Cebus_albifrons.Contig22                               18893509 5 -  29618158 agagg
i Cebus_albifrons.Contig22                              C 0 I 189
s Cebus_olivaceus.k141_93739                                11053 5 -     26817 agagg
i Cebus_olivaceus.k141_93739                            C 0 I 189
s Cebus_unicolor.k141_239009                                15296 5 +     25043 agagg
i Cebus_unicolor.k141_239009                            C 0 I 189
s Cercocebus_atys.KQ010443.1                              6558399 5 +   6739814 tgagg
i Cercocebus_atys.KQ010443.1                            I 141 C 0
s Cercocebus_chrysogaster.k141_2328246                      29876 5 +     60454 tgagg
i Cercocebus_chrysogaster.k141_2328246                  I 141 C 0
s Cercocebus_lunulatus.k141_4634644                          5080 5 -     21101 tgagg
i Cercocebus_lunulatus.k141_4634644                     I 141 C 0
s Cercocebus_torquatus.k141_3969582                         62390 5 -    107033 tgagg
i Cercocebus_torquatus.k141_3969582                     I 141 C 0
s Cercopithecus_ascanius.k141_4123525                        5273 5 -     17608 tgagg
i Cercopithecus_ascanius.k141_4123525                   I 141 C 0
s Cercopithecus_cephus.k141_3893260                          2437 5 +     45019 tgagg
i Cercopithecus_cephus.k141_3893260                     I 141 C 0
s Cercopithecus_diana.k141_2561715                           2502 5 +     15177 tgagg
i Cercopithecus_diana.k141_2561715                      I 140 C 0
s Cercopithecus_hamlyni.k141_129805                          5321 5 +     16677 tgagg
i Cercopithecus_hamlyni.k141_129805                     I 141 C 0
s Cercopithecus_lowei.k141_623764                           27488 5 +     35983 tgagg
i Cercopithecus_lowei.k141_623764                       I 141 C 0
s Cercopithecus_albogularis.ctg51                              11994019 5 +  12117833 tgagg
i Cercopithecus_albogularis.ctg51                             I 141 C 0
s Cercopithecus_mona.ctg12                               46480777 5 +  46592721 tgagg
i Cercopithecus_mona.ctg12                              I 141 C 0
s Cercopithecus_neglectus.k141_2078027                      44331 5 -     45581 tgagg
i Cercopithecus_neglectus.k141_2078027                  I 141 C 0
s Cercopithecus_nictitans.k141_1129315                       5333 5 +     35577 tgagg
i Cercopithecus_nictitans.k141_1129315                  I 141 C 0
s Cercopithecus_petaurista.k141_64532                        5106 5 -     25661 tgagg
i Cercopithecus_petaurista.k141_64532                   I 141 C 0
s Cercopithecus_pogonias.k141_3109732                        5085 5 -     17744 tgagg
i Cercopithecus_pogonias.k141_3109732                   I 141 C 0
s Cercopithecus_roloway.k141_2263608                        24669 5 +     37128 tgagg
i Cercopithecus_roloway.k141_2263608                    I 141 C 0
s Cheracebus_lucifer.k141_619653                             8329 5 -     18223 AGAGG
i Cheracebus_lucifer.k141_619653                        C 0 I 194
s Cheracebus_lugens.k141_203936                             25347 5 +     25473 agagg
i Cheracebus_lugens.k141_203936                         C 0 N 0
s Cheracebus_regulus.k141_2128895                           44387 5 +     57117 AGAGG
i Cheracebus_regulus.k141_2128895                       C 0 I 174
s Cheracebus_torquatus.k141_315545                          49066 5 +     54541 AGAGG
i Cheracebus_torquatus.k141_315545                      C 0 I 174
s Chiropotes_israelita.k141_1189915                         73868 5 +    196370 agagg
i Chiropotes_israelita.k141_1189915                     C 0 I 179
s Chiropotes_sagulatus.k141_773804                          18049 5 +     40510 agagg
i Chiropotes_sagulatus.k141_773804                      C 0 I 179
s Chlorocebus_aethiops.ctg22                             15142688 5 -  15256731 tgagg
i Chlorocebus_aethiops.ctg22                            I 141 C 0
s Chlorocebus_pygerythrus.k141_1486215                      37297 5 -     53260 tgagg
i Chlorocebus_pygerythrus.k141_1486215                  I 141 C 0
s Chlorocebus_sabaeus.CM001963.2                        101147856 5 + 101219884 TGAGG
i Chlorocebus_sabaeus.CM001963.2                        I 141 C 0
s Erythrocebus_patas.Contig8                             48779867 5 -  48907691 tgagg
i Erythrocebus_patas.Contig8                            I 141 C 0
s Gorilla_beringei.k141_111300                               8305 5 -     14630 tgagg
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119655405 5 - 195582420 tgagg
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Lagothrix_lagothricha.k141_12968                          52895 5 -    147782 AGAGG
i Lagothrix_lagothricha.k141_12968                      C 0 I 190
s Lophocebus_aterrimus.ctg55                             19251487 5 +  19376315 tgagg
i Lophocebus_aterrimus.ctg55                            I 141 C 0
s Macaca_arctoides.k141_2201161                             23238 5 +     74745 tgagg
i Macaca_arctoides.k141_2201161                         I 141 C 0
s Macaca_assamensis.Contig65                             12709699 5 +  12821369 tgagg
i Macaca_assamensis.Contig65                            I 141 C 0
s Macaca_cyclopis.k119_883699                                2273 5 -     26467 tgagg
i Macaca_cyclopis.k119_883699                           I 141 C 0
s Macaca_fascicularis.k141_155037                           50144 5 +     63263 tgagg
i Macaca_fascicularis.k141_155037                       I 141 C 0
s Macaca_fuscata.k119_938422                                 2254 5 -     26361 tgagg
i Macaca_fuscata.k119_938422                            I 141 C 0
s Macaca_leonina.k141_467472                                 5431 5 -      7381 tgagg
i Macaca_leonina.k141_467472                            I 141 C 0
s Macaca_maura.k141_251854                                  48669 5 -     79256 tgagg
i Macaca_maura.k141_251854                              I 141 C 0
s Macaca_mulatta.NC_041755.1                            196038771 5 + 196197964 TGAGG
i Macaca_mulatta.NC_041755.1                            I 141 C 0
s Macaca_nemestrina.KQ004885.1                           11448937 5 +  11645122 tgagg
i Macaca_nemestrina.KQ004885.1                          I 141 C 0
s Macaca_nigra.k141_282495                                   7623 5 -     46448 tgagg
i Macaca_nigra.k141_282495                              I 141 C 0
s Macaca_radiata.k141_3680256                                5289 5 -     13212 tgagg
i Macaca_radiata.k141_3680256                           I 141 C 0
s Macaca_siberu.k141_741907                                 18966 5 -     55006 tgagg
i Macaca_siberu.k141_741907                             I 141 C 0
s Macaca_silenus.Contig12                                43844072 5 +  43892939 tgagg
i Macaca_silenus.Contig12                               I 141 C 0
s Macaca_thibetana.k99_662710                               20253 5 -     24607 tgagg
i Macaca_thibetana.k99_662710                           I 141 C 0
s Macaca_tonkeana.k141_2870633                               7620 5 -     27140 tgagg
i Macaca_tonkeana.k141_2870633                          I 141 C 0
s Mandrillus_leucophaeus.scaffold125                     43440652 5 -  43563597 tgagg
i Mandrillus_leucophaeus.scaffold125                    I 141 C 0
s Mandrillus_sphinx.Contig144                             4453467 5 -   4543643 tgagg
i Mandrillus_sphinx.Contig144                           I 141 C 0
s Miopithecus_ogouensis.k141_2935907                         5206 5 +     29742 tgagg
i Miopithecus_ogouensis.k141_2935907                    I 141 C 0
s Pan_paniscus.CM003386.1                               127577667 5 - 205426864 TGAGG
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120154827 5 - 196562556 TGAGG
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Papio_anubis.CM001492.2                               188159449 5 - 188283584 TGAGG
i Papio_anubis.CM001492.2                               I 141 C 0
s Papio_cynocephalus.k141_45376                              2539 5 +     25005 tgagg
i Papio_cynocephalus.k141_45376                         I 141 C 0
s Papio_hamadryas.Contig15                               47516821 5 +  47705337 tgagg
i Papio_hamadryas.Contig15                              I 141 C 0
s Papio_kindae.k141_5458022                                 70812 5 -    104429 tgagg
i Papio_kindae.k141_5458022                             I 141 C 0
s Papio_papio.k141_979496                                    9344 5 +     14967 tgagg
i Papio_papio.k141_979496                               I 141 C 0
s Papio_ursinus.k141_1345919                                 5209 5 -      7628 tgagg
i Papio_ursinus.k141_1345919                            I 141 C 0
s Pongo_abelii.NDHI03003816.1                              190186 5 -    373494 TGAGG
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19810833 5 +  19899266 tgagg
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15675461 5 -  43202129 agagg
i Saimiri_boliviensis.NW_024100938.1                    C 0 I 184
s Saimiri_cassiquiarensis.k141_808270                        7374 5 +     34089 agagg
i Saimiri_cassiquiarensis.k141_808270                   C 0 I 184
s Saimiri_macrodon.k141_2087127                              7316 5 -     60842 agagg
i Saimiri_macrodon.k141_2087127                         C 0 I 184
s Saimiri_oerstedii.k141_841116                              7409 5 +     67014 agagg
i Saimiri_oerstedii.k141_841116                         C 0 I 184
s Saimiri_sciureus.k141_1947592                              7387 5 +     60816 agagg
i Saimiri_sciureus.k141_1947592                         C 0 I 184
s Saimiri_ustus.k141_1282476                                 7324 5 -     76454 agagg
i Saimiri_ustus.k141_1282476                            C 0 I 184
s Sapajus_apella.ctg10                                   17344055 5 -  30362882 agagg
i Sapajus_apella.ctg10                                  C 0 I 229
s Sapajus_macrocephalus.k141_966464                         23416 5 -     62485 agtgg
i Sapajus_macrocephalus.k141_966464                     C 0 I 189
s Theropithecus_gelada.CM009951.1                       194010981 5 - 194193292 tgagg
i Theropithecus_gelada.CM009951.1                       I 141 C 0
e Eptesicus_fuscus.JH977687.1                             4708429 237 +   6522550 I
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Petromus_typicus.PetTyp_scaffold_33007                    16921 0 -     36578 C
e Sorex_araneus.JH798170.1                               17769647 0 -  27805282 C
e Dinomys_branickii.DinBra_scaffold_1996                   158442 1030 +    228994 I
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           4051 456 -      6963 I
e Oryctolagus_cuniculus.CM000803.1                      141878516 2929 + 163896628 I
e Ochotona_princeps.JH802095.1                            4996729 2205 -  23139505 I
e Lepus_americanus.LepAme_scaffold_62849                    15480 2946 +     22452 I
e Perognathus_longimembris.PerPac_flattened_line_19359       1614 38 +     49596 I
e Dipodomys_stephensi.DipSte_scaffold_84338                  1789 28 -     11986 I
e Dipodomys_ordii.KN672545.1                              3659429 30 +   4240102 I
e Suricata_suricatta.SurSur_flattened_line_20339            32401 0 +     62062 C
e Nomascus_siki_a.k141_1035055                                 2525 0 -      3602 C
e Ziphius_cavirostris.ZipCav_flattened_line_60625            1538 2 -     13665 I
e Zalophus_californianus.ZalCal_flattened_line_4097        219280 0 -    227762 C
e Vulpes_lagopus.VulLag_flattened_line_2045                143835 0 -    281493 C
e Vicugna_pacos.KN269600.1                                1527832 0 -   2331223 C
e Ursus_maritimus.KK498671.1                              6519892 0 +  28682327 C
e Uropsilus_gracilis.UroGra_scaffold_69449                   9768 0 +     10241 C
e Tursiops_truncatus.MRVK01000923.1                      69316794 2 -  96451834 I
e Trichechus_manatus.JH594618.1                          16088878 0 +  31416278 C
e Tragulus_javanicus.TraJav_scaffold_14717                   9149 2 +     90398 I
e Tonatia_saurophila.TonSau_scaffold_3334                  137563 275 -    259118 I
e Tapirus_terrestris.TapTer_scaffold_14939                  61041 0 +     99546 C
e Tapirus_indicus.TapInd_scaffold_176                      810399 0 +   1148477 C
e Tamandua_tetradactyla.TamTet_scaffold_26877               16259 379 +     45698 I
e Tadarida_brasiliensis.TadBra_scaffold_61492                1822 242 +     20549 I
e Sus_scrofa.CM000824.4                                 189273670 1086 + 218635234 I
e Spilogale_gracilis.SpiGra_flattened_line_905             238244 0 -    276980 C
e Solenodon_paradoxus.SolPar_flattened_line_1012            23185 0 +    739146 C
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   39231 0 -    114521 C
e Saiga_tatarica.SaiTat_scaffold_1069354                      105 0 -       709 C
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Rhinolophus_sinicus.LVEH01000179.1                      1792212 2 +   2252614 I
e Rangifer_tarandus.RanTarSib_scaffold_24239                20109 0 +     68503 C
e Puma_concolor.QAVW01000427.1                          131539433 0 - 161321710 C
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Pteronura_brasiliensis.PteBra_flattened_line_1343        249686 0 -    344369 C
e Pteronotus_parnellii.KE867983.1                            5588 252 -     27784 I
e Procavia_capensis.ProCapCap_scaffold_11797                50321 0 -     88779 C
e Platanista_gangetica.PlaMin_flattened_line_72990           8998 2 +     21690 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Phocoena_phocoena.PhoPho_flattened_line_53071              2530 2 +      8220 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    120818 0 -    135482 C
e Pantholops_hodgsonii.KE114631.1                         1071126 0 -   1292953 C
e Panthera_tigris.KE721879.1                              5032785 0 -   6340057 C
e Panthera_pardus.KV860323.1                              3643137 0 +  18214204 C
e Panthera_onca.PanOnc_flattened_line_1615                  39322 0 +    295523 C
e Ovis_canadensis.OviCan_scaffold_6251                      83485 0 +    140051 C
e Ovis_aries.CM001582.2                                 134082257 0 - 275406953 C
e Otocyon_megalotis.JAEUCK010005121.1                      314612 0 -    505867 C
e Orycteropus_afer.OryAfe_flattened_line_13509              63439 0 -     66828 C
e Orcinus_orca.KB316965.1                                 7228065 2 -   7562323 I
e Okapia_johnstoni.LVCL01S0017931.1                         41334 0 +     78940 C
e Odocoileus_virginianus.KZ101650.1                       1083245 0 +   1425656 C
e Odobenus_rosmarus.KB229369.1                             684428 0 -   3126709 C
e Nyctereutes_procyonoides.CAJHUB010000786.1                37467 0 +   3668941 C
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Neophocaena_asiaeorientalis.KZ688543.1                  3954389 2 -   4490290 I
e Neomonachus_schauinslandi.NINY01007774.1                4489721 0 -  14209539 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             6589 379 -      8794 I
e Myotis_myotis.MyoMyo_scaffold_6123                        13515 236 +     66751 I
e Myotis_lucifugus.GL429887.1                             3468272 238 -   3747815 I
e Myotis_davidii.KB114863.1                               5022194 233 +   6462685 I
e Myotis_brandtii.KE161952.1                               970769 237 +   8389877 I
e Mustela_putorius.JH417978.1                             4427567 0 -  28371801 C
e Murina_feae.MurFea_scaffold_2254                          23900 236 -    100666 I
e Mungos_mungo.MunMun_flattened_line_8729                  149746 0 -    168139 C
e Moschus_moschiferus.MosMos_scaffold_78805                  5813 0 -     19904 C
e Mormoops_blainvillei.MorMeg_scaffold_2952                162937 259 +    265003 I
e Monodon_monoceros.MonMon_M_scaffold_5598                 149798 2 +    154973 I
e Mirounga_angustirostris.MirAng_flattened_line_8852        16322 0 -    104932 C
e Miniopterus_schreibersii.MinSch_scaffold_24116            36998 214 +     45743 I
e Miniopterus_natalensis.LDJU01000022.1                   8212509 213 +  10048721 I
e Micronycteris_hirsuta.MicHir_scaffold_37978               24387 274 -     32043 I
e Microgale_talazaci.MicTal_scaffold_34660                  40768 0 -     48017 C
e Mesoplodon_bidens.MesBid_scaffold_96348                    2003 2 -     12939 I
e Mellivora_capensis.MelCap_flattened_line_15433             5726 0 -     87323 C
e Megaderma_lyra.MegLyr_scaffold_3562                       65026 2 -    234502 I
e Manis_pentadactyla.KN017078.1                             39380 0 +     58827 C
e Manis_javanica.JSZB01003966.1                            149232 0 +    252755 C
e Lycaon_pictus.CM007556.1                               11094608 0 +  39895028 C
e Loxodonta_africana.GL010040.1                          20597894 0 -  62548349 C
e Lipotes_vexillifer.KE558548.1                            139369 2 +   3060487 I
e Leptonychotes_weddellii.KB714749.1                      3090826 0 -   3498232 C
e Lasiurus_borealis.LasBor_scaffold_59542                    5042 241 +     26176 I
e Kogia_breviceps.KogBre_flattened_line_35920               26998 2 +     37189 I
e Inia_geoffrensis.IniGeo_flattened_line_66725              12417 2 +     17520 I
e Hyaena_hyaena.HyaHya_flattened_line_20729                 22640 0 -     67322 C
e Hipposideros_galeritus.HipGal_scaffold_52959                377 2 +     26078 I
e Hipposideros_armiger.JXIK01001085.1                      282608 2 -    477199 I
e Hippopotamus_amphibius.HipAmp_scaffold_1308              150208 0 +    277961 C
e Heterohyrax_brucei.HetBruBak_scaffold_13814               68359 0 -    108006 C
e Hemitragus_hylocrius.HemHyl_scaffold_16669                32467 0 -     91191 C
e Helogale_parvula.HelPar_flattened_line_22962              22066 0 +     53719 C
e Giraffa_tippelskirchi.LVKQ01S012154.1                    185599 0 -    189561 C
e Felis_nigripes.FelNig_flattened_line_8080                 26394 0 +     52776 C
e Felis_catus_fca126.CM031420.1                         129285299 0 - 158578461 C
e Eubalaena_japonica.EubJap_flattened_line_7756             64881 0 +     89355 C
e Eschrichtius_robustus.EscRob_flattened_line_685          318424 0 +    330699 C
e Equus_przewalskii.ATBW01073585.1                          16166 0 +     92910 C
e Equus_caballus.CM000402.2                              13354676 0 +  41866177 C
e Equus_asinus.JREZ01000062.1                             5856176 0 -   7175178 C
e Enhydra_lutris.KZ291749.1                              85876835 0 +  99434291 C
e Elephantulus_edwardii.JH947210.1                        7830035 1277 +  15467074 I
e Elaphurus_davidianus.JRFZ01086400.1                     1495795 0 +   1727528 C
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Echinops_telfairi.JH980316.1                           22999931 2 -  44670279 I
e Diceros_bicornis.DicBicMic_scaffold_9545                   6452 0 +    151128 C
e Dicerorhinus_sumatrensis.PEKH010003161.1                 325812 0 +    993696 C
e Desmodus_rotundus.KZ672188.1                           18700517 262 -  18957592 I
e Delphinapterus_leucas.KZ290064.1                       80040207 0 -  96802777 C
e Dasypus_novemcinctus.JH568778.1                          185121 383 -   6883506 I
e Cryptoprocta_ferox.CryFer_flattened_line_19014            56919 0 -     70449 C
e Crocidura_indochinensis.CroInd_scaffold_27484              1226 0 -     22648 C
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1337 2 -      5782 I
e Condylura_cristata.JH655880.1                          60621791 0 +  78930452 C
e Choloepus_hoffmanni.KN194586.1                           763329 503 +    964067 I
e Choloepus_didactylus.ChoDid_scaffold_36182                18024 504 -     21363 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_160623         6920 0 -      9338 C
e Catagonus_wagneri.CatWag_scaffold_1305                   162277 0 -    276539 C
e Carollia_perspicillata.CarPer_scaffold_4436               61226 261 +     67245 I
e Capra_hircus.CM004562.1                               135711414 0 - 157403528 C
e Capra_aegagrus.CM003214.1                              21330197 0 + 157394656 C
e Canis_lupus_orion.HG994411.1                           16461937 0 -  44759192 C
e Canis_lupus_familiaris.chr31                           11095152 0 +  39895921 C
e Canis_lupus_dingo.QKWQ01001993.1                       11272441 0 -  35597290 C
e Canis_lupus_VD.CanFam_VD_scaffold_16982                   20732 0 +     87036 C
e CanFam4.chr31                                          11525758 0 +  39901454 C
e Camelus_ferus.KB016973.1                                2976160 0 +   6889770 C
e Camelus_dromedarius.KN271192.1                           400424 0 -  15254737 C
e Camelus_bactrianus.KN276303.1                           3222722 0 -   8989139 C
e Bubalus_bubalis.KI419065.1                               674242 0 +   1914593 C
e Bos_taurus.CM000177.6                                  22664479 0 + 158972876 C
e Bos_mutus.JH883513.1                                     418090 0 +    998990 C
e Bos_indicus.CM003021.1                                 22955825 0 + 161108492 C
e Bison_bison.KN264915.1                                   301727 0 -   6870073 C
e Beatragus_hunteri.BeaHun_scaffold_21644                   47579 0 -     72089 C
e Balaenoptera_bonaerensis.DF502048.1                        8754 0 -     13118 C
e Balaenoptera_acutorostrata.KI537095.1                  26383581 0 +  51448160 C
e Artibeus_jamaicensis.ArtJam_scaffold_41619                10440 261 -     29036 I
e Antilocapra_americana.AntAmePen_scaffold_27338             2548 0 +     55446 C
e Anoura_caudifer.AnoCau_scaffold_422                      392020 257 -    631301 I
e Ammotragus_lervia.NIVO01013474.1                        3525117 0 +   4113121 C
e Ailurus_fulgens.LNAC01000003.1                          7099380 0 -  16596857 C
e Ailuropoda_melanoleuca.LNAT01000321.1                  10662594 0 +  23371972 C
e Acinonyx_jubatus.LLWD01000356.1                         2038912 0 +   3721120 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           20901 0 -    119109 C
e Glis_glis.GliGli_scaffold_79770                           15993 0 -     18683 C
e Zapus_hudsonius.ZapHud_scaffold_64392                     20218 0 -     20485 C
e Jaculus_jaculus.JH725517.1                              8577088 0 +  11848649 C
e Hylobates_pileatus_a.tarseq_592                             35692 75 -     60944 I
e Hylobates_pileatus_b.ContigUN                                 14627649 0 -  25970782 C
e Allactaga_bullata.AllBul_scaffold_70162                   21404 0 -     22067 C
e Hylobates_muelleri.k141_1139146                             200 0 +      4161 C
e Hylobates_klossii.k141_468230                              2300 0 +      5464 C
e Hylobates_agilis.k141_1633646                               784 0 -      2102 C
e Hylobates_abbotti.k141_1816750                              814 0 +      3202 C
e Galeopterus_variegatus.GalVar_scaffold_354               159184 0 +    324696 C
e Microtus_ochrogaster.CM001673.1                        22823881 0 -  98408828 C
e Xerus_inauris.XerIna_scaffold_7898                       128400 2868 -    134049 I
e Varecia_variegata.k141_775891                             27530 0 -     33872 C
e Varecia_rubra.k141_432109                                  7995 0 -     20643 C
e Tupaia_tana.TupTan_flattened_line_68454                    9338 0 +     13056 C
e Tupaia_chinensis.KB320831.1                             2797404 0 -   3938065 C
e Trachypithecus_pileatus.k141_1022309                       5226 0 +     13828 C
e Trachypithecus_phayrei.ctg3                            44662914 0 -  44834318 C
e Trachypithecus_obscurus.k141_1115109                       8130 0 -     28054 C
e Trachypithecus_melamera.k141_699241                        2986 0 -     24393 C
e Trachypithecus_leucocephalus.k141_381681                   3005 0 +     12481 C
e Trachypithecus_laotum.k141_760702                          4719 0 +     14371 C
e Trachypithecus_hatinhensis.k141_504423                     6067 0 -     15592 C
e Trachypithecus_germaini.k141_868450                        3883 0 -     11566 C
e Trachypithecus_geei.k141_670367                           46082 0 -     54611 C
e Trachypithecus_francoisi.k141_768164                       4689 0 -     14244 C
e Trachypithecus_cristatus.k141_1011511                      5261 0 -     12939 C
e Trachypithecus_crepusculus.k141_1588528                   23360 0 -     32910 C
e Trachypithecus_auratus.k141_738098                        29800 0 +     38948 C
e Tarsius_wallacei.k141_48636                               60532 3805 +     65473 I
e Tarsius_lariang.k141_609102                               27216 3812 +     42269 I
e Spermophilus_dauricus.KZ294190.1                        2243603 0 +   2842873 C
e Sigmodon_hispidus.SigHis_scaffold_11332                  104689 0 -    120886 C
e Semnopithecus_vetulus.k141_1143185                        16479 0 +     30600 C
e Semnopithecus_schistaceus.k141_387461                     33457 0 +     42640 C
e Semnopithecus_priam.k141_410937                           40312 0 +     46263 C
e Semnopithecus_johnii.k141_785014                         121532 0 +    130994 C
e Semnopithecus_hypoleucos.k141_761524                      11528 0 +     20762 C
e Semnopithecus_entellus.k141_1572367                        6153 0 +     15331 C
e Rhinopithecus_strykeri.ctg4                            44859307 0 -  45163003 C
e Rhinopithecus_bieti.k119_554384                            2917 0 -     17045 C
e Rattus_norvegicus.chr11                                13917336 0 +  90463843 C
e Pygathrix_nigripes_a.k141_101123                             8537 0 +     18040 C
e Pygathrix_nigripes_b.ctg79                                 6809148 0 +   6970761 C
e Pygathrix_cinerea.k141_374971                             32651 0 +     56732 C
e Psammomys_obesus.NESX01026517.1                           37921 0 +     77221 C
e Propithecus_verreauxi.k141_158021                         42002 0 -     48185 C
e Propithecus_tattersalli.k141_907138                       19738 0 -     53241 C
e Propithecus_perrieri.k141_7554                            20103 0 +     27322 C
e Propithecus_edwardsi.k141_1317105                         38180 0 -     44753 C
e Propithecus_diadema.k141_577245                           45793 0 +     52369 C
e Propithecus_coronatus.k141_1353159                         6446 0 +     11805 C
e Propithecus_coquerelli.NW_012147863.1                     20390 0 -     30946 C
e Prolemur_simus.MPIZ01000048.1                           6851355 0 +  12164890 C
e Presbytis_mitrata.k141_860013                              8661 0 +     14865 C
e Presbytis_comata.k141_672698                               8546 0 -     15069 C
e Plecturocebus_moloch.k141_890597                          25717 0 -     75465 C
e Plecturocebus_miltoni.k141_841561                         15130 0 +    134592 C
e Plecturocebus_hoffmannsi.k141_985533                       3215 0 -    119457 C
e Plecturocebus_grovesi.k141_242819                         25407 0 +    152463 C
e Plecturocebus_dubius.k141_3565563                          6053 0 -     55515 C
e Plecturocebus_cupreus.k141_1145860                         1970 0 -     43940 C
e Plecturocebus_cinerascens.k141_744510                     25334 0 +    147771 C
e Plecturocebus_caligatus.k141_2539816                      15734 0 -     98129 C
e Plecturocebus_brunneus.k141_498086                        25495 0 +     67491 C
e Plecturocebus_bernhardi.k141_959214                       25282 0 +     44506 C
e Pithecia_vanzolinii.k141_831006                           15424 0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514 0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521 0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292 0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093 0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038 0 +     78826 C
e Pithecia_albicans.k141_991845                             45662 0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000036.1               26743271 0 +  26888534 C
e Piliocolobus_kirkii.k141_929665                            4788 0 +      7694 C
e Piliocolobus_gordonorum.k141_1270531                       5421 0 -     17985 C
e Piliocolobus_badius.k141_1987485                           4802 0 -      5908 C
e Peromyscus_maniculatus.KI615518.1                       4955125 0 -   8017169 C
e Perodicticus_potto.k141_1136815                           10207 0 +     61070 C
e Perodicticus_ibeanus.k141_117958                           9080 0 -     23713 C
e Otolemur_garnettii.GL873528.1                          18011493 0 -  38779656 C
e Otolemur_crassicaudatus.k141_505435                        3512 0 -     53940 C
e Onychomys_torridus.OnyTor_scaffold_12578                  42756 0 +     62360 C
e Ondatra_zibethicus.OndZib_scaffold_6821                  130071 0 +    145789 C
e Octodon_degus.JH651621.1                                3687420 1881 +  10294119 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65678347 0 +  89412551 C
e Nycticebus_coucang.k141_771591                            13545 0 +     16181 C
e Nycticebus_bengalensis.LG16                            65570136 0 -  95554990 C
e Nasalis_larvatus.k141_153429                              11264 0 +     48152 C
e Nannospalax_galili.KL201303.1                            119867 0 +    362372 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     91920 1922 -    117718 I
e Muscardinus_avellanarius.MusAve_scaffold_9643             14525 0 +     98495 C
e Mus_spretus.CM004110.1                                 74336277 0 +  97876770 C
e Mus_pahari.LT608305.1                                  67559927 0 +  89017189 C
e Mus_musculus.chr16                                     75493550 0 +  98207768 C
e Mus_caroli.LT608236.1                                  70771497 0 +  92629107 C
e Mirza_zaza.k141_593947                                     4089 0 -     12809 C
e Microcebus_murinus.CM007691.1                          16513035 0 +  47401472 C
e Mesocricetus_auratus.KB708139.1                         1051192 0 -  26018355 C
e Meriones_unguiculatus.MerUng_scaffold_52233               15570 0 +     15977 C
e Marmota_marmota.CZRN01000005.1                         36877588 0 +  64221397 C
e Loris_tardigradus.ctg97                                 3781302 0 +   6799190 C
e Loris_lydekkerianus.k141_550999                           13563 0 +     84689 C
e Lepilemur_septentrionalis.k141_710646                      1084 0 -     13103 C
e Lepilemur_ruficaudatus.k141_574529                        35037 0 -     38897 C
e Lepilemur_dorsalis.k141_134267                            56656 0 +     63517 C
e Lepilemur_ankaranensis.k141_884009                        27292 0 +     39228 C
e Lemur_catta.scaffold_1                                258409979 0 - 285822530 C
e Indri_indri.k141_2197838                                    116 0 +      3484 C
e Ictidomys_tridecemlineatus.JH393315.1                   7129728 0 +  13083262 C
e Hystrix_cristata.HysCri_scaffold_50788                     7688 1865 +     22540 I
e Heterocephalus_glaber.JH602058.1                        2560252 0 +  31725842 C
e Hapalemur_occidentalis.k141_797938                        48308 0 -     54384 C
e Hapalemur_meridionalis.k141_186231                        31681 0 -     42470 C
e Hapalemur_griseus.k141_1387522                             8432 0 +     56096 C
e Hapalemur_gilberti.k141_279011                             3105 0 -     11661 C
e Hapalemur_alaotrensis.k141_1280836                         4627 0 +     10286 C
e Graphiurus_murinus.GraMur_scaffold_4493                   79386 0 +    118900 C
e Galagoides_demidoff.k141_1769638                          13144 0 +     27357 C
e Galago_senegalensis.k141_964197                           16038 0 -     43889 C
e Galago_moholi.ctg555                                     213680 0 -    847004 C
e Fukomys_damarensis.KN123630.1                          13895732 0 -  19261668 C
e Eulemur_sanfordi.k141_186399                              18623 0 -     29447 C
e Eulemur_rufus.k141_1620292                                35891 0 +     46535 C
e Eulemur_rubriventer.k141_411740                           21157 0 +     26808 C
e Eulemur_mongoz.k141_825972                                18693 0 +     27497 C
e Eulemur_macaco.k141_747087                                 2027 0 -     19505 C
e Eulemur_fulvus.k141_653297                                14043 0 +    109717 C
e Eulemur_flavifrons.k141_903901                            10560 0 +     60246 C
e Eulemur_coronatus.k141_3240342                            14235 0 +     36558 C
e Eulemur_collaris.k141_1015201                              1102 0 -      4292 C
e Eulemur_albifrons.k141_715837                              7832 0 +     13586 C
e Ellobius_talpinus.LOJH01198462.1                           1213 0 -      1901 C
e Ellobius_lutescens.LOEQ01003611.1                        243471 0 -    369425 C
e Dolichotis_patagonum.DolPat_scaffold_14102                39604 0 -     73477 C
e Daubentonia_madagascariensis.ctg11                     16847687 0 +  31942871 C
e Dasyprocta_punctata.DasPun_flattened_line_634             61584 0 -    236241 C
e Cuniculus_paca.CunPac_flattened_line_16637                20446 0 +     26546 C
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 32592 1717 -     67205 I
e Ctenodactylus_gundi.CteGun_scaffold_447                  213664 0 -    956709 C
e Cricetulus_griseus.LT883672.1                          53034667 0 +  72327488 C
e Cricetomys_gambianus.CriGam_scaffold_949                 282297 0 -    399297 C
e Colobus_polykomos.k141_1406057                            19335 0 +     23629 C
e Colobus_guereza.LG08                                  147667351 0 + 156195979 C
e Colobus_angolensis.KN985967.1                          10889423 0 +  10971483 C
e Chinchilla_lanigera.JH721867.1                         15963245 964 +  43084221 I
e Cheirogaleus_medius.k141_133808                           10871 0 +     13308 C
e Cheirogaleus_major.k141_1157592                           61827 0 -     68416 C
e Cephalopachus_bancanus.k141_702587                         8788 3391 +     21754 I
e Cavia_tschudii.CavTsc_scaffold_488                       177725 1742 +    436027 I
e Cavia_porcellus.DS562889.1                             15799553 1742 -  24440124 I
e Cavia_aperea.AVPZ01000278.1                            15787615 1741 -  24422027 I
e Carlito_syrichta.NW_007248099.1                          309764 3411 +    345090 I
e Avahi_peyrierasi.k141_798820                               3156 0 +      6337 C
e Avahi_laniger.k141_2840928                                 9540 0 -     16375 C
e Arctocebus_calabarensis.k141_587554                        4710 0 +      9265 C
e Acomys_cahirinus.AcoCah_scaffold_1625                    117433 0 -    189883 C
e Nomascus_siki_b.tarseq_80                             27964 0 -  18771707 C
e Nomascus_annamensis.k141_224620                            2115 0 -      2316 C
e Symphalangus_syndactylus.tarseq_24                        17909 0 -  13920577 C
e Nomascus_gabriellae.k141_1032971                           1782 0 -      1918 C
e Nomascus_concolor.k141_226614                              4212 0 -      5092 C
e Hoolock_leuconedys.ctg903                                    12345 212 -     61166 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               16596 59 +    209709 TGCTGGGAGGGTGATACAATGATATACTTAGAGGTCAtatggcagctttgtgccccttt
s Allenopithecus_nigroviridis.k141_2469532                   4463 59 -     60446 tgctgggagggtgacgcaatgatatgcccagagggcatatggcagcgacgtgccccttt
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         5181 59 -     29318 tgctgggagggtgacgcaatgatatgcccagagggcatatggcagcgacatgccccttt
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         4119 59 +     38766 tgctgggagggtgacgcaatgatatgcccagagggcatatggcagcgacgtgccccttt
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          5074 59 -     80423 tgctgggagggtgacgcaatgatatgcccagagggcatatggcagcgacatgccccttt
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_165776                             16474 51 +     19426 tgttgggagagtgatata--------cccagaggagccatggcagttctgtgccacttt
i Alouatta_belzebul.k141_165776                         I 187 C 0
s Alouatta_caraya.k141_664908                                2026 51 -     12443 tgttgggagagtgatata--------cccagaggagccatggcagttctgtgccacttt
i Alouatta_caraya.k141_664908                           I 187 C 0
s Alouatta_discolor.k141_2476351                             1749 51 +     41985 tgttgggagagtgatata--------cccagaggagccatggcagttctgtgccacttt
i Alouatta_discolor.k141_2476351                        I 187 C 0
s Alouatta_juara.k141_2534995                                3503 51 +      4011 tgttgggagagtgatata--------cccagaggagccatggcagttctgtgccacttt
i Alouatta_juara.k141_2534995                           I 187 C 0
s Alouatta_macconnelli.k141_2318944                          1825 51 -     24210 tgttgggagagtgatata--------cccagaggagccatggcagttctgtgccacttt
i Alouatta_macconnelli.k141_2318944                     I 187 C 0
s Alouatta_nigerrima.k141_2187093                           28407 51 -     30219 tgttgggagagtgatata--------cccagaggagccatggcagttctgtgccacttt
i Alouatta_nigerrima.k141_2187093                       I 187 C 0
s Alouatta_palliata.k141_2378775                              456 51 +      5328 tgttgggagagtgatata--------cccagaggagccatggcagttctgtgccacttt
i Alouatta_palliata.k141_2378775                        I 177 C 0
s Alouatta_puruensis.k141_398195                            44597 51 +     45367 tgttgggagagtgatata--------cccagaggagccatggcagttctgtgccacttt
i Alouatta_puruensis.k141_398195                        I 187 C 0
s Alouatta_seniculus.k141_790278                             3516 51 -      9835 tgttgggagagtgatata--------cccagaggagccatggcagttctgtgccacttt
i Alouatta_seniculus.k141_790278                        I 187 C 0
s Aotus_azarae.k141_3170768                                 65422 51 +     78111 tgttgggagggtgataca--------cccagaggagccatggtagttctgtgccacttt
i Aotus_azarae.k141_3170768                             I 154 C 0
s Aotus_griseimembra.k141_3275623                            8368 51 +     22701 tgttgggaggatgataca--------cccaaaagagccaaggcagttctgtgccacttt
i Aotus_griseimembra.k141_3275623                       I 144 C 0
s Aotus_nancymaae.KZ196176.1                              5752326 51 +   9889416 tgttgggagggtgataca--------cccagaggagccatggtagttctgtgccacttt
i Aotus_nancymaae.KZ196176.1                            I 154 C 0
s Aotus_trivirgatus.k141_1740727                             8924 51 -    104377 tgttgggagggtgataca--------cccagaggagccatggtagttctgtgccacttt
i Aotus_trivirgatus.k141_1740727                        I 159 C 0
s Aotus_vociferans.k141_718647                               8931 51 +     23246 tgttgggagggtgataca--------cccagaggagccatggtagttctgtgccacttt
i Aotus_vociferans.k141_718647                          I 159 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9542217 51 +  39197703 tgttgggagagtgatata--------cccagaggagccatggcagttctgtgccacttt
i Ateles_geoffroyi_b.tarseq_2582                           I 190 C 0
s Ateles_belzebuth.k141_1348307                             63490 51 +     85812 tgttgggagagtgatata--------cccagaggagccatggcagttctgtgccacttt
i Ateles_belzebuth.k141_1348307                         I 190 C 0
s Ateles_chamek.k141_1072810                                14503 51 +     89302 tgttgggagagtgatata--------cccagaggagccatggcagttctgtgccacttt
i Ateles_chamek.k141_1072810                            I 190 C 0
s Ateles_geoffroyi_a.k141_1300742                             19004 51 -     58268 tgttgggagagtgatata--------cccagaggagccatggcagttctgtgccacttt
i Ateles_geoffroyi_a.k141_1300742                         I 190 C 0
s Ateles_marginatus.k141_899112                             66998 51 +    119057 tgttgggagagtgatata--------cccagaggagccatggcagttctgtgccacttt
i Ateles_marginatus.k141_899112                         I 190 C 0
s Ateles_paniscus.k141_1631200                               8967 51 -     25888 tgttgggagagtgatata--------cccagaggagccatggcagttctgtgccacttt
i Ateles_paniscus.k141_1631200                          I 190 C 0
s Cacajao_ayresi.k141_724503                               116871 51 -    171031 tgttgagagggtgataca--------cccagaggagccatggcagttctgtgccacttt
i Cacajao_ayresi.k141_724503                            I 194 C 0
s Cacajao_calvus.k141_96166                                 15891 51 +    125063 tgttgagagggtgataca--------cccagaggagccatggcagttctgtgccacttt
i Cacajao_calvus.k141_96166                             I 189 C 0
s Cacajao_hosomi.k141_303789                                17938 51 -    216513 tgttgagagggtgataca--------cccagaggagccatggcagttctgtgccacttt
i Cacajao_hosomi.k141_303789                            I 189 C 0
s Cacajao_melanocephalus.k141_1160263                       10481 51 -    134917 tgttgagagggtgataca--------cccagaggagccatggcagttctgtgccacttt
i Cacajao_melanocephalus.k141_1160263                   I 189 C 0
s Cebus_albifrons.Contig22                               18893703 51 -  29618158 tgttgggagggtgataca--------cccagaggagccatggcagctctgtgccacttt
i Cebus_albifrons.Contig22                              I 189 C 0
s Cebus_olivaceus.k141_93739                                11247 51 -     26817 tgttgggagggtgataca--------cccagaggagccatggcagctctgtgccacttt
i Cebus_olivaceus.k141_93739                            I 189 C 0
s Cebus_unicolor.k141_239009                                15490 51 +     25043 tgttgggagggtgataca--------cccagaggagccatggcagctctgtgccacttt
i Cebus_unicolor.k141_239009                            I 189 C 0
s Cercocebus_atys.KQ010443.1                              6558404 59 +   6739814 ggctgggagggtgacgcaATGATATGCCCAGAGGGCATATGGCAGCGACGTGCCCCTTt
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      29881 59 +     60454 ggctgggagggtgacgcaatgatatgcccagagggcatatggcagcgacgtgccccttt
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          5085 59 -     21101 ggctgggagggtgacgcaatgatatgcccagagggcatatggcagcgacgtgccccttt
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         62395 59 -    107033 ggctgggagggtgacgcaatgatatgcccagagggcatatggcagcgacgtgccccttt
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        5278 59 -     17608 tgctgggagggtgacgcaatgatatgcccagagggcttatggcagcgacgtgccccttt
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          2442 59 +     45019 tgctgggagggtgacgcaatgatatacccagagggcttatggcagcgacgtgccccttt
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           2507 59 +     15177 tgctgggagggtgacgcaatgatatgcccagagggcttatggcagcgacgtgccccttt
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          5326 59 +     16677 tgctgggagggtgacgcaatgatatgcccagagggcttatggcagcgacgtgccccttt
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           27493 59 +     35983 tgctgggagggtgacgcaatgatatgcccagagggcatatggcagtgacgtgccccttt
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11994024 59 +  12117833 tgctgggagggtgacgcaatgatatgcccagagggcatatggcagcgacgtgccccttt
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46480782 59 +  46592721 tgctgggagggtgacgcaatgatatgcccagagggcatatggcagtgacgtgccccttt
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      44336 59 -     45581 tgctgggagggttacgcaatgatatgcccagagggcatatggcagtgacgtgccccttt
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       5338 59 +     35577 tgctgggagggtgacgcaatgatatgcccagagggcatatggcagcgacgtgccccttt
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        5111 59 -     25661 tgctgggagggtgacgcaatgatatgcccagagggcttatggcagcgacgtgccccttt
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        5090 59 -     17744 tgctgggagggtgacgcaatgatatgcccagagggcttatggcagtgacgtgccccttt
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        24674 59 +     37128 tgctgggagggtgacgcaatgatatgcccagagggcttatggcagcgacgtgccccttt
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Cheracebus_lucifer.k141_619653                             8528 51 -     18223 tgttgggagggtgacata--------cccagaggagccatggcagctctgtgtcacttt
i Cheracebus_lucifer.k141_619653                        I 194 C 0
s Cheracebus_lugens.k141_996499                               267 51 +    188999 tgttgggagggtgacata--------cccagaggagccatggcagctctgtgtcacttt
i Cheracebus_lugens.k141_996499                         N 0 C 0
s Cheracebus_regulus.k141_2128895                           44566 51 +     57117 tgttgggagggtgacata--------cccagaggagccatggcagctctgtgtcacttt
i Cheracebus_regulus.k141_2128895                       I 174 C 0
s Cheracebus_torquatus.k141_315545                          49245 51 +     54541 tgttgggagggtgacata--------cccagaggagccatggcagctctgtgtcacttt
i Cheracebus_torquatus.k141_315545                      I 174 C 0
s Chiropotes_israelita.k141_1189915                         74052 51 +    196370 tgttgggagggtgataca--------cccagcggagccatggcagttctgtgccacttt
i Chiropotes_israelita.k141_1189915                     I 179 C 0
s Chiropotes_sagulatus.k141_773804                          18233 51 +     40510 tgttgggagggtgataca--------cccagcggagccatggcagttctgtgccacttt
i Chiropotes_sagulatus.k141_773804                      I 179 C 0
s Chlorocebus_aethiops.ctg22                             15142693 59 -  15256731 tgctgggagggtgacgcagtgatatgcccagagggcatatggcagcgacgtgccccttc
i Chlorocebus_aethiops.ctg22                            C 0 I 145
s Chlorocebus_pygerythrus.k141_1486215                      37302 59 -     53260 tgctgggagggtgacgcagtgatatgcccagagggcatatggcagcgacgtgccccttc
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101147861 59 + 101219884 TGCTGGGAGGGTGACGCAATGATATGCCCAGAGGGCATATGGCAGCGACGTGCCCCTtt
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Erythrocebus_patas.Contig8                             48779872 59 -  48907691 tgctgggagggtgacgcaatgatatgcccagagggcatatggcagcgacgtgccccttt
i Erythrocebus_patas.Contig8                            C 0 C 0
s Gorilla_beringei.k141_111300                               8310 59 -     14630 tgctgggagggtgacacaatgatatacccagagggcatatggcagctttgtgtcccttt
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119655410 59 - 195582420 tgctgggagggtgacacaatgatatacccagagggcatatggcagctttgtgtcccttt
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Hoolock_leuconedys.ctg79                                      7961 14 -   7690867 ---------------------------------------------CTTTGTGCCCCTTT
i Hoolock_leuconedys.ctg79                                 I 1206 I 1651
s Hylobates_abbotti.k141_1816750                              814 14 +      3202 ---------------------------------------------ctttgtgccccttt
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1633646                               784 14 -      2102 ---------------------------------------------ctttgtgccccttt
i Hylobates_agilis.k141_1633646                         C 0 C 0
s Hylobates_klossii.k141_468230                              2300 14 +      5464 ---------------------------------------------ctttgtgccccttt
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14627649 14 -  25970782 ---------------------------------------------ctttgtgccccttt
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                             200 14 +      4161 ---------------------------------------------ctttgtgccccttt
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Lagothrix_lagothricha.k141_12968                          53090 51 -    147782 tgttgggagagtgatata--------cccagaggagccatggcagttctgtgccacttt
i Lagothrix_lagothricha.k141_12968                      I 190 C 0
s Lophocebus_aterrimus.ctg55                             19251492 59 +  19376315 tgctgggagggtgacgcaatgatatgcccagagggcatatggcagcgacgtgccccttt
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Macaca_arctoides.k141_2201161                             23243 59 +     74745 tgctgggagggtgatgcaatgatatgcccagagggcatatggcagcgacgtgccccttt
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12709704 59 +  12821369 tgctgggagggtgatgcaatgatatgcccagagggcatatggcagcgacgtgccccttt
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                2278 59 -     26467 tgctgggagggtgacgcaatgatatgcccagagggcatatggcagtgacgtgccccttt
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           50149 59 +     63263 tgctgggagggtgacgcaatgatatgcccagagggcatatggcagcgacatgccccttt
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 2259 59 -     26361 tgctgggagggtgacgcaatgatatgcccagagggcatatggcagcgacgtgccccttt
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 5436 59 -      7381 tgctgggagggtgacacaatgatatgcccagagggcatatggcagcgacgtgccccttt
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  48674 59 -     79256 tgctgggagggtgacgcaatgatatgcccagagggcatatggcagcgacgtgccccttt
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196038776 59 + 196197964 TGCTGGGAGGGTGACGCAATGATATGCCCAGAGGGCATATGGCAGTGACGTGCCCCTTt
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11448942 59 +  11645122 tgctgggagggtgacacaATGATATGCCCAGAGGGCATATGGCAGCGACGTGCCCCTTt
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   7628 59 -     46448 tgctgggagggtgacgcaatgatatgcccagagggcatatggcagcgacgtgccccttt
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                5294 59 -     13212 tgctgggagggtgatgcaatgatatgcccagagggcatatggcagcgacgtgccccttt
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 18971 59 -     55006 tgctgggagggtgacgcaatgatatgcccagagggcatatggcagcgacgtgccccttt
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43844077 59 +  43892939 tgctgggagggtgacacaatgatatgcccagagggcatatggcagcgacgtgccccttt
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               20258 59 -     24607 tgctgggagggtgatgcaatgatatgcccagagggcatatggcagcgacgtgccccttt
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               7625 59 -     27140 tgctgggagggtgacgcaatgatatgcccagagggcatatggcagcgacgtgccccttt
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43440657 59 -  43563597 tgctgggagggtgacgcaatgatatgcccagagggcatatggcagcgacgtgccccttt
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4453472 56 -   4543643 tgctgggagggtgacgcaat---atgcccagagggcatatggcagcgacgtgccccttt
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         5211 59 +     29742 tgctgggagggtgacgcaatgatatgcccagaggccatatggcagcgacgtgccccttt
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Nomascus_annamensis.k141_224620                            2115 14 -      2316 ---------------------------------------------ctttgtgccccttt
i Nomascus_annamensis.k141_224620                       C 0 C 0
s Nomascus_concolor.k141_226614                              4212 14 -      5092 ---------------------------------------------ctttgtgccccttt
i Nomascus_concolor.k141_226614                         C 0 C 0
s Nomascus_gabriellae.k141_1032971                           1782 14 -      1918 ---------------------------------------------ctttgtgccccttt
i Nomascus_gabriellae.k141_1032971                      C 0 C 0
s Nomascus_siki_b.tarseq_80                             27964 14 -  18771707 ---------------------------------------------ctttgtgccccttt
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_1035055                                 2525 14 -      3602 ---------------------------------------------ctttgtgccccttt
i Nomascus_siki_a.k141_1035055                            C 0 C 0
s Pan_paniscus.CM003386.1                               127577672 59 - 205426864 TGCTGGGAGGGTGACACAATGATATACCCAGAGGGCATATGGCAGCTTTGTGTCCCTTT
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120154832 59 - 196562556 TGCTGGGAGGGTGACACAATGATATACCCAGAGGGCATATGGCAGCTTTGTGTCCCTTT
i Pan_troglodytes.CM009241.2                            C 0 I 450
s Papio_anubis.CM001492.2                               188159454 59 - 188283584 TGCTGGGAGGGTGACCCAATGATATGCCCAGAGGGCATATGGCAGCGACGTGCCCCTtt
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              2544 59 +     25005 tgctgggagggtgacccaatgatatgcccagagggcatatggcagcgacgtgccccttt
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47516826 59 +  47705337 tgctgggagggtgacccaatgatatgcccagagggcatatggcagcgacgtgccccttt
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 70817 59 -    104429 tgctgggagggtgacccaatgatatgcccagagggcatatggcagcgacgtgccccttt
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    9349 59 +     14967 tgctgggagggtgacccaatgatatgcccagagggcatatggcagcgacgtgccccttt
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 5214 59 -      7628 tgctgggagggtgacgcaatgatatgcccagagggcatatggcagcgacgtgccccttt
i Papio_ursinus.k141_1345919                            C 0 C 0
s Pongo_abelii.NDHI03003816.1                              190191 59 -    373494 TGCTGGGAGGGTGATACAATGATATACCCAGAGGGCATATGGCAGCTCTGTGTCCCTTT
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19810838 59 +  19899266 tgctgggagggtgatacaatgatatacccagagggcatatggcagctctgtgtcccttt
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15675650 51 -  43202129 tgtcgggagggtggtaca--------cccagaggagccatggcagctctgtgccacttT
i Saimiri_boliviensis.NW_024100938.1                    I 184 C 0
s Saimiri_cassiquiarensis.k141_808270                        7563 51 +     34089 tgtcgggagggtggtaca--------cccagaggagccatggcagctctgtgccacttt
i Saimiri_cassiquiarensis.k141_808270                   I 184 C 0
s Saimiri_macrodon.k141_2087127                              7505 51 -     60842 tgtcgggagggtggtaca--------cccagaggagccatggcagctctgtgccacttt
i Saimiri_macrodon.k141_2087127                         I 184 C 0
s Saimiri_oerstedii.k141_841116                              7598 51 +     67014 tgtcgggagggtggtaca--------cccagaggagccatggcagctctgtgccacttt
i Saimiri_oerstedii.k141_841116                         I 184 C 0
s Saimiri_sciureus.k141_1947592                              7576 51 +     60816 tgtcaggagggtggtaca--------cccagaggagccatggcagctctgtgccacttt
i Saimiri_sciureus.k141_1947592                         I 184 C 0
s Saimiri_ustus.k141_1282476                                 7513 51 -     76454 tgtcgggagggtggtaca--------cccagaggagccatggcagctctgtgccacttt
i Saimiri_ustus.k141_1282476                            I 184 C 0
s Sapajus_apella.ctg10                                   17344289 51 -  30362882 tgttaggagggtgataca--------cccagaggagccatggcagctctgtgccacttt
i Sapajus_apella.ctg10                                  I 229 C 0
s Sapajus_macrocephalus.k141_966464                         23610 51 -     62485 tgttaggagggtgataca--------cccagaggagccatggcagctctgtgccacttt
i Sapajus_macrocephalus.k141_966464                     I 189 C 0
s Symphalangus_syndactylus.tarseq_24                        17909 14 -  13920577 ---------------------------------------------ctttgtgccccttt
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Theropithecus_gelada.CM009951.1                       194010986 59 - 194193292 tgctgggagggtgacccaATGATATGCCCAGAGGGCATATGGCAGCGACGTGCCCCTTt
i Theropithecus_gelada.CM009951.1                       C 0 C 0
e Eptesicus_fuscus.JH977687.1                             4708429 237 +   6522550 I
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Petromus_typicus.PetTyp_scaffold_33007                    16921  0 -     36578 C
e Sorex_araneus.JH798170.1                               17769647  0 -  27805282 C
e Dinomys_branickii.DinBra_scaffold_1996                   158442 1030 +    228994 I
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           4051 456 -      6963 I
e Oryctolagus_cuniculus.CM000803.1                      141878516 2929 + 163896628 I
e Ochotona_princeps.JH802095.1                            4996729 2205 -  23139505 I
e Lepus_americanus.LepAme_scaffold_62849                    15480 2946 +     22452 I
e Perognathus_longimembris.PerPac_flattened_line_19359       1614 38 +     49596 I
e Dipodomys_stephensi.DipSte_scaffold_84338                  1789 28 -     11986 I
e Dipodomys_ordii.KN672545.1                              3659429 30 +   4240102 I
e Suricata_suricatta.SurSur_flattened_line_20339            32401  0 +     62062 C
e Ziphius_cavirostris.ZipCav_flattened_line_60625            1538  2 -     13665 I
e Zalophus_californianus.ZalCal_flattened_line_4097        219280  0 -    227762 C
e Vulpes_lagopus.VulLag_flattened_line_2045                143835  0 -    281493 C
e Vicugna_pacos.KN269600.1                                1527832  0 -   2331223 C
e Ursus_maritimus.KK498671.1                              6519892  0 +  28682327 C
e Uropsilus_gracilis.UroGra_scaffold_69449                   9768  0 +     10241 C
e Tursiops_truncatus.MRVK01000923.1                      69316794  2 -  96451834 I
e Trichechus_manatus.JH594618.1                          16088878  0 +  31416278 C
e Tragulus_javanicus.TraJav_scaffold_14717                   9149  2 +     90398 I
e Tonatia_saurophila.TonSau_scaffold_3334                  137563 275 -    259118 I
e Tapirus_terrestris.TapTer_scaffold_14939                  61041  0 +     99546 C
e Tapirus_indicus.TapInd_scaffold_176                      810399  0 +   1148477 C
e Tamandua_tetradactyla.TamTet_scaffold_26877               16259 379 +     45698 I
e Tadarida_brasiliensis.TadBra_scaffold_61492                1822 242 +     20549 I
e Sus_scrofa.CM000824.4                                 189273670 1086 + 218635234 I
e Spilogale_gracilis.SpiGra_flattened_line_905             238244  0 -    276980 C
e Solenodon_paradoxus.SolPar_flattened_line_1012            23185  0 +    739146 C
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   39231  0 -    114521 C
e Saiga_tatarica.SaiTat_scaffold_1069354                      105  0 -       709 C
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Rhinolophus_sinicus.LVEH01000179.1                      1792212  2 +   2252614 I
e Rangifer_tarandus.RanTarSib_scaffold_24239                20109  0 +     68503 C
e Puma_concolor.QAVW01000427.1                          131539433  0 - 161321710 C
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Pteronura_brasiliensis.PteBra_flattened_line_1343        249686  0 -    344369 C
e Pteronotus_parnellii.KE867983.1                            5588 252 -     27784 I
e Procavia_capensis.ProCapCap_scaffold_11797                50321  0 -     88779 C
e Platanista_gangetica.PlaMin_flattened_line_72990           8998  2 +     21690 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Phocoena_phocoena.PhoPho_flattened_line_53071              2530  2 +      8220 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    120818  0 -    135482 C
e Pantholops_hodgsonii.KE114631.1                         1071126  0 -   1292953 C
e Panthera_tigris.KE721879.1                              5032785  0 -   6340057 C
e Panthera_pardus.KV860323.1                              3643137  0 +  18214204 C
e Panthera_onca.PanOnc_flattened_line_1615                  39322  0 +    295523 C
e Ovis_canadensis.OviCan_scaffold_6251                      83485  0 +    140051 C
e Ovis_aries.CM001582.2                                 134082257  0 - 275406953 C
e Otocyon_megalotis.JAEUCK010005121.1                      314612  0 -    505867 C
e Orycteropus_afer.OryAfe_flattened_line_13509              63439  0 -     66828 C
e Orcinus_orca.KB316965.1                                 7228065  2 -   7562323 I
e Okapia_johnstoni.LVCL01S0017931.1                         41334  0 +     78940 C
e Odocoileus_virginianus.KZ101650.1                       1083245  0 +   1425656 C
e Odobenus_rosmarus.KB229369.1                             684428  0 -   3126709 C
e Nyctereutes_procyonoides.CAJHUB010000786.1                37467  0 +   3668941 C
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Neophocaena_asiaeorientalis.KZ688543.1                  3954389  2 -   4490290 I
e Neomonachus_schauinslandi.NINY01007774.1                4489721  0 -  14209539 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             6589 379 -      8794 I
e Myotis_myotis.MyoMyo_scaffold_6123                        13515 236 +     66751 I
e Myotis_lucifugus.GL429887.1                             3468272 238 -   3747815 I
e Myotis_davidii.KB114863.1                               5022194 233 +   6462685 I
e Myotis_brandtii.KE161952.1                               970769 237 +   8389877 I
e Mustela_putorius.JH417978.1                             4427567  0 -  28371801 C
e Murina_feae.MurFea_scaffold_2254                          23900 236 -    100666 I
e Mungos_mungo.MunMun_flattened_line_8729                  149746  0 -    168139 C
e Moschus_moschiferus.MosMos_scaffold_78805                  5813  0 -     19904 C
e Mormoops_blainvillei.MorMeg_scaffold_2952                162937 259 +    265003 I
e Monodon_monoceros.MonMon_M_scaffold_5598                 149798  2 +    154973 I
e Mirounga_angustirostris.MirAng_flattened_line_8852        16322  0 -    104932 C
e Miniopterus_schreibersii.MinSch_scaffold_24116            36998 214 +     45743 I
e Miniopterus_natalensis.LDJU01000022.1                   8212509 213 +  10048721 I
e Micronycteris_hirsuta.MicHir_scaffold_37978               24387 274 -     32043 I
e Microgale_talazaci.MicTal_scaffold_34660                  40768  0 -     48017 C
e Mesoplodon_bidens.MesBid_scaffold_96348                    2003  2 -     12939 I
e Mellivora_capensis.MelCap_flattened_line_15433             5726  0 -     87323 C
e Megaderma_lyra.MegLyr_scaffold_3562                       65026  2 -    234502 I
e Manis_pentadactyla.KN017078.1                             39380  0 +     58827 C
e Manis_javanica.JSZB01003966.1                            149232  0 +    252755 C
e Lycaon_pictus.CM007556.1                               11094608  0 +  39895028 C
e Loxodonta_africana.GL010040.1                          20597894  0 -  62548349 C
e Lipotes_vexillifer.KE558548.1                            139369  2 +   3060487 I
e Leptonychotes_weddellii.KB714749.1                      3090826  0 -   3498232 C
e Lasiurus_borealis.LasBor_scaffold_59542                    5042 241 +     26176 I
e Kogia_breviceps.KogBre_flattened_line_35920               26998  2 +     37189 I
e Inia_geoffrensis.IniGeo_flattened_line_66725              12417  2 +     17520 I
e Hyaena_hyaena.HyaHya_flattened_line_20729                 22640  0 -     67322 C
e Hipposideros_galeritus.HipGal_scaffold_52959                377  2 +     26078 I
e Hipposideros_armiger.JXIK01001085.1                      282608  2 -    477199 I
e Hippopotamus_amphibius.HipAmp_scaffold_1308              150208  0 +    277961 C
e Heterohyrax_brucei.HetBruBak_scaffold_13814               68359  0 -    108006 C
e Hemitragus_hylocrius.HemHyl_scaffold_16669                32467  0 -     91191 C
e Helogale_parvula.HelPar_flattened_line_22962              22066  0 +     53719 C
e Giraffa_tippelskirchi.LVKQ01S012154.1                    185599  0 -    189561 C
e Felis_nigripes.FelNig_flattened_line_8080                 26394  0 +     52776 C
e Felis_catus_fca126.CM031420.1                         129285299  0 - 158578461 C
e Eubalaena_japonica.EubJap_flattened_line_7756             64881  0 +     89355 C
e Eschrichtius_robustus.EscRob_flattened_line_685          318424  0 +    330699 C
e Equus_przewalskii.ATBW01073585.1                          16166  0 +     92910 C
e Equus_caballus.CM000402.2                              13354676  0 +  41866177 C
e Equus_asinus.JREZ01000062.1                             5856176  0 -   7175178 C
e Enhydra_lutris.KZ291749.1                              85876835  0 +  99434291 C
e Elephantulus_edwardii.JH947210.1                        7830035 1277 +  15467074 I
e Elaphurus_davidianus.JRFZ01086400.1                     1495795  0 +   1727528 C
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Echinops_telfairi.JH980316.1                           22999931  2 -  44670279 I
e Diceros_bicornis.DicBicMic_scaffold_9545                   6452  0 +    151128 C
e Dicerorhinus_sumatrensis.PEKH010003161.1                 325812  0 +    993696 C
e Desmodus_rotundus.KZ672188.1                           18700517 262 -  18957592 I
e Delphinapterus_leucas.KZ290064.1                       80040207  0 -  96802777 C
e Dasypus_novemcinctus.JH568778.1                          185121 383 -   6883506 I
e Cryptoprocta_ferox.CryFer_flattened_line_19014            56919  0 -     70449 C
e Crocidura_indochinensis.CroInd_scaffold_27484              1226  0 -     22648 C
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1337  2 -      5782 I
e Condylura_cristata.JH655880.1                          60621791  0 +  78930452 C
e Choloepus_hoffmanni.KN194586.1                           763329 503 +    964067 I
e Choloepus_didactylus.ChoDid_scaffold_36182                18024 504 -     21363 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_160623         6920  0 -      9338 C
e Catagonus_wagneri.CatWag_scaffold_1305                   162277  0 -    276539 C
e Carollia_perspicillata.CarPer_scaffold_4436               61226 261 +     67245 I
e Capra_hircus.CM004562.1                               135711414  0 - 157403528 C
e Capra_aegagrus.CM003214.1                              21330197  0 + 157394656 C
e Canis_lupus_orion.HG994411.1                           16461937  0 -  44759192 C
e Canis_lupus_familiaris.chr31                           11095152  0 +  39895921 C
e Canis_lupus_dingo.QKWQ01001993.1                       11272441  0 -  35597290 C
e Canis_lupus_VD.CanFam_VD_scaffold_16982                   20732  0 +     87036 C
e CanFam4.chr31                                          11525758  0 +  39901454 C
e Camelus_ferus.KB016973.1                                2976160  0 +   6889770 C
e Camelus_dromedarius.KN271192.1                           400424  0 -  15254737 C
e Camelus_bactrianus.KN276303.1                           3222722  0 -   8989139 C
e Bubalus_bubalis.KI419065.1                               674242  0 +   1914593 C
e Bos_taurus.CM000177.6                                  22664479  0 + 158972876 C
e Bos_mutus.JH883513.1                                     418090  0 +    998990 C
e Bos_indicus.CM003021.1                                 22955825  0 + 161108492 C
e Bison_bison.KN264915.1                                   301727  0 -   6870073 C
e Beatragus_hunteri.BeaHun_scaffold_21644                   47579  0 -     72089 C
e Balaenoptera_bonaerensis.DF502048.1                        8754  0 -     13118 C
e Balaenoptera_acutorostrata.KI537095.1                  26383581  0 +  51448160 C
e Artibeus_jamaicensis.ArtJam_scaffold_41619                10440 261 -     29036 I
e Antilocapra_americana.AntAmePen_scaffold_27338             2548  0 +     55446 C
e Anoura_caudifer.AnoCau_scaffold_422                      392020 257 -    631301 I
e Ammotragus_lervia.NIVO01013474.1                        3525117  0 +   4113121 C
e Ailurus_fulgens.LNAC01000003.1                          7099380  0 -  16596857 C
e Ailuropoda_melanoleuca.LNAT01000321.1                  10662594  0 +  23371972 C
e Acinonyx_jubatus.LLWD01000356.1                         2038912  0 +   3721120 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           20901  0 -    119109 C
e Glis_glis.GliGli_scaffold_79770                           15993  0 -     18683 C
e Zapus_hudsonius.ZapHud_scaffold_64392                     20218  0 -     20485 C
e Jaculus_jaculus.JH725517.1                              8577088  0 +  11848649 C
e Hylobates_pileatus_a.tarseq_592                             35692 75 -     60944 I
e Allactaga_bullata.AllBul_scaffold_70162                   21404  0 -     22067 C
e Galeopterus_variegatus.GalVar_scaffold_354               159184  0 +    324696 C
e Microtus_ochrogaster.CM001673.1                        22823881  0 -  98408828 C
e Xerus_inauris.XerIna_scaffold_7898                       128400 2868 -    134049 I
e Varecia_variegata.k141_775891                             27530  0 -     33872 C
e Varecia_rubra.k141_432109                                  7995  0 -     20643 C
e Tupaia_tana.TupTan_flattened_line_68454                    9338  0 +     13056 C
e Tupaia_chinensis.KB320831.1                             2797404  0 -   3938065 C
e Trachypithecus_pileatus.k141_1022309                       5226  0 +     13828 C
e Trachypithecus_phayrei.ctg3                            44662914  0 -  44834318 C
e Trachypithecus_obscurus.k141_1115109                       8130  0 -     28054 C
e Trachypithecus_melamera.k141_699241                        2986  0 -     24393 C
e Trachypithecus_leucocephalus.k141_381681                   3005  0 +     12481 C
e Trachypithecus_laotum.k141_760702                          4719  0 +     14371 C
e Trachypithecus_hatinhensis.k141_504423                     6067  0 -     15592 C
e Trachypithecus_germaini.k141_868450                        3883  0 -     11566 C
e Trachypithecus_geei.k141_670367                           46082  0 -     54611 C
e Trachypithecus_francoisi.k141_768164                       4689  0 -     14244 C
e Trachypithecus_cristatus.k141_1011511                      5261  0 -     12939 C
e Trachypithecus_crepusculus.k141_1588528                   23360  0 -     32910 C
e Trachypithecus_auratus.k141_738098                        29800  0 +     38948 C
e Tarsius_wallacei.k141_48636                               60532 3805 +     65473 I
e Tarsius_lariang.k141_609102                               27216 3812 +     42269 I
e Spermophilus_dauricus.KZ294190.1                        2243603  0 +   2842873 C
e Sigmodon_hispidus.SigHis_scaffold_11332                  104689  0 -    120886 C
e Semnopithecus_vetulus.k141_1143185                        16479  0 +     30600 C
e Semnopithecus_schistaceus.k141_387461                     33457  0 +     42640 C
e Semnopithecus_priam.k141_410937                           40312  0 +     46263 C
e Semnopithecus_johnii.k141_785014                         121532  0 +    130994 C
e Semnopithecus_hypoleucos.k141_761524                      11528  0 +     20762 C
e Semnopithecus_entellus.k141_1572367                        6153  0 +     15331 C
e Rhinopithecus_strykeri.ctg4                            44859307  0 -  45163003 C
e Rhinopithecus_bieti.k119_554384                            2917  0 -     17045 C
e Rattus_norvegicus.chr11                                13917336  0 +  90463843 C
e Pygathrix_nigripes_a.k141_101123                             8537  0 +     18040 C
e Pygathrix_nigripes_b.ctg79                                 6809148  0 +   6970761 C
e Pygathrix_cinerea.k141_374971                             32651  0 +     56732 C
e Psammomys_obesus.NESX01026517.1                           37921  0 +     77221 C
e Propithecus_verreauxi.k141_158021                         42002  0 -     48185 C
e Propithecus_tattersalli.k141_907138                       19738  0 -     53241 C
e Propithecus_perrieri.k141_7554                            20103  0 +     27322 C
e Propithecus_edwardsi.k141_1317105                         38180  0 -     44753 C
e Propithecus_diadema.k141_577245                           45793  0 +     52369 C
e Propithecus_coronatus.k141_1353159                         6446  0 +     11805 C
e Propithecus_coquerelli.NW_012147863.1                     20390  0 -     30946 C
e Prolemur_simus.MPIZ01000048.1                           6851355  0 +  12164890 C
e Presbytis_mitrata.k141_860013                              8661  0 +     14865 C
e Presbytis_comata.k141_672698                               8546  0 -     15069 C
e Plecturocebus_moloch.k141_890597                          25717  0 -     75465 C
e Plecturocebus_miltoni.k141_841561                         15130  0 +    134592 C
e Plecturocebus_hoffmannsi.k141_985533                       3215  0 -    119457 C
e Plecturocebus_grovesi.k141_242819                         25407  0 +    152463 C
e Plecturocebus_dubius.k141_3565563                          6053  0 -     55515 C
e Plecturocebus_cupreus.k141_1145860                         1970  0 -     43940 C
e Plecturocebus_cinerascens.k141_744510                     25334  0 +    147771 C
e Plecturocebus_caligatus.k141_2539816                      15734  0 -     98129 C
e Plecturocebus_brunneus.k141_498086                        25495  0 +     67491 C
e Plecturocebus_bernhardi.k141_959214                       25282  0 +     44506 C
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000036.1               26743271  0 +  26888534 C
e Piliocolobus_kirkii.k141_929665                            4788  0 +      7694 C
e Piliocolobus_gordonorum.k141_1270531                       5421  0 -     17985 C
e Piliocolobus_badius.k141_1987485                           4802  0 -      5908 C
e Peromyscus_maniculatus.KI615518.1                       4955125  0 -   8017169 C
e Perodicticus_potto.k141_1136815                           10207  0 +     61070 C
e Perodicticus_ibeanus.k141_117958                           9080  0 -     23713 C
e Otolemur_garnettii.GL873528.1                          18011493  0 -  38779656 C
e Otolemur_crassicaudatus.k141_505435                        3512  0 -     53940 C
e Onychomys_torridus.OnyTor_scaffold_12578                  42756  0 +     62360 C
e Ondatra_zibethicus.OndZib_scaffold_6821                  130071  0 +    145789 C
e Octodon_degus.JH651621.1                                3687420 1881 +  10294119 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65678347  0 +  89412551 C
e Nycticebus_coucang.k141_771591                            13545  0 +     16181 C
e Nycticebus_bengalensis.LG16                            65570136  0 -  95554990 C
e Nasalis_larvatus.k141_153429                              11264  0 +     48152 C
e Nannospalax_galili.KL201303.1                            119867  0 +    362372 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     91920 1922 -    117718 I
e Muscardinus_avellanarius.MusAve_scaffold_9643             14525  0 +     98495 C
e Mus_spretus.CM004110.1                                 74336277  0 +  97876770 C
e Mus_pahari.LT608305.1                                  67559927  0 +  89017189 C
e Mus_musculus.chr16                                     75493550  0 +  98207768 C
e Mus_caroli.LT608236.1                                  70771497  0 +  92629107 C
e Mirza_zaza.k141_593947                                     4089  0 -     12809 C
e Microcebus_murinus.CM007691.1                          16513035  0 +  47401472 C
e Mesocricetus_auratus.KB708139.1                         1051192  0 -  26018355 C
e Meriones_unguiculatus.MerUng_scaffold_52233               15570  0 +     15977 C
e Marmota_marmota.CZRN01000005.1                         36877588  0 +  64221397 C
e Loris_tardigradus.ctg97                                 3781302  0 +   6799190 C
e Loris_lydekkerianus.k141_550999                           13563  0 +     84689 C
e Lepilemur_septentrionalis.k141_710646                      1084  0 -     13103 C
e Lepilemur_ruficaudatus.k141_574529                        35037  0 -     38897 C
e Lepilemur_dorsalis.k141_134267                            56656  0 +     63517 C
e Lepilemur_ankaranensis.k141_884009                        27292  0 +     39228 C
e Lemur_catta.scaffold_1                                258409979  0 - 285822530 C
e Indri_indri.k141_2197838                                    116  0 +      3484 C
e Ictidomys_tridecemlineatus.JH393315.1                   7129728  0 +  13083262 C
e Hystrix_cristata.HysCri_scaffold_50788                     7688 1865 +     22540 I
e Heterocephalus_glaber.JH602058.1                        2560252  0 +  31725842 C
e Hapalemur_occidentalis.k141_797938                        48308  0 -     54384 C
e Hapalemur_meridionalis.k141_186231                        31681  0 -     42470 C
e Hapalemur_griseus.k141_1387522                             8432  0 +     56096 C
e Hapalemur_gilberti.k141_279011                             3105  0 -     11661 C
e Hapalemur_alaotrensis.k141_1280836                         4627  0 +     10286 C
e Graphiurus_murinus.GraMur_scaffold_4493                   79386  0 +    118900 C
e Galagoides_demidoff.k141_1769638                          13144  0 +     27357 C
e Galago_senegalensis.k141_964197                           16038  0 -     43889 C
e Galago_moholi.ctg555                                     213680  0 -    847004 C
e Fukomys_damarensis.KN123630.1                          13895732  0 -  19261668 C
e Eulemur_sanfordi.k141_186399                              18623  0 -     29447 C
e Eulemur_rufus.k141_1620292                                35891  0 +     46535 C
e Eulemur_rubriventer.k141_411740                           21157  0 +     26808 C
e Eulemur_mongoz.k141_825972                                18693  0 +     27497 C
e Eulemur_macaco.k141_747087                                 2027  0 -     19505 C
e Eulemur_fulvus.k141_653297                                14043  0 +    109717 C
e Eulemur_flavifrons.k141_903901                            10560  0 +     60246 C
e Eulemur_coronatus.k141_3240342                            14235  0 +     36558 C
e Eulemur_collaris.k141_1015201                              1102  0 -      4292 C
e Eulemur_albifrons.k141_715837                              7832  0 +     13586 C
e Ellobius_talpinus.LOJH01198462.1                           1213  0 -      1901 C
e Ellobius_lutescens.LOEQ01003611.1                        243471  0 -    369425 C
e Dolichotis_patagonum.DolPat_scaffold_14102                39604  0 -     73477 C
e Daubentonia_madagascariensis.ctg11                     16847687  0 +  31942871 C
e Dasyprocta_punctata.DasPun_flattened_line_634             61584  0 -    236241 C
e Cuniculus_paca.CunPac_flattened_line_16637                20446  0 +     26546 C
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 32592 1717 -     67205 I
e Ctenodactylus_gundi.CteGun_scaffold_447                  213664  0 -    956709 C
e Cricetulus_griseus.LT883672.1                          53034667  0 +  72327488 C
e Cricetomys_gambianus.CriGam_scaffold_949                 282297  0 -    399297 C
e Colobus_polykomos.k141_1406057                            19335  0 +     23629 C
e Colobus_guereza.LG08                                  147667351  0 + 156195979 C
e Colobus_angolensis.KN985967.1                          10889423  0 +  10971483 C
e Chinchilla_lanigera.JH721867.1                         15963245 964 +  43084221 I
e Cheirogaleus_medius.k141_133808                           10871  0 +     13308 C
e Cheirogaleus_major.k141_1157592                           61827  0 -     68416 C
e Cephalopachus_bancanus.k141_702587                         8788 3391 +     21754 I
e Cavia_tschudii.CavTsc_scaffold_488                       177725 1742 +    436027 I
e Cavia_porcellus.DS562889.1                             15799553 1742 -  24440124 I
e Cavia_aperea.AVPZ01000278.1                            15787615 1741 -  24422027 I
e Carlito_syrichta.NW_007248099.1                          309764 3411 +    345090 I
e Avahi_peyrierasi.k141_798820                               3156  0 +      6337 C
e Avahi_laniger.k141_2840928                                 9540  0 -     16375 C
e Arctocebus_calabarensis.k141_587554                        4710  0 +      9265 C
e Acomys_cahirinus.AcoCah_scaffold_1625                    117433  0 -    189883 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               16655 198 +    209709 tcaccatacctggccctatgtgtctcttctatttgacagttcctgatttgtatcagacagtaact-------------gtaagcaaagtgctttcttgggttctgtgagccatcttagcaaatta-------tagaacctgggaaaggaatccatggaagtcctaatttatagccagttggtcaggagtatgacaggcc-------ca----caactcctctct-aatgg
s Allenopithecus_nigroviridis.k141_2469532                   4522 198 -     60446 tcaccatacctggccctatgtgtctcttctatttgactgttcctgatttgtatcagacagtgcat-------------ataagcaaaatgctttcttgggttctgtgagccatccaagcacatta-------tagaacctggggaaggaatccatggaagtcctaatttctagccagttggtcaggagtatgggaggcc-------ca----cagctggtctct-aatgt
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         5240 197 -     29318 tcaccatacctggccctatgtgtctcttctatttgactgtt-ctgatttgtatcagacagtacat-------------ataagcaaaatgctttcttgggttctgtgagccattctagcacatta-------tagaacctggggaaggaatccatggaagtcctaatttctagccagttggtcaggagtatgggaggcc-------ca----cagctggtctct-aatgt
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         4178 197 +     38766 tcaccatacctggccctatgtgtctcttctatttgactgtt-ctgatttgtatcagacagtgcat-------------acaagcaaaatgctttcttgggttctgtgagccatcctagcacatta-------tagaacctggggaaggaatccatggaagtcctaatttctagccagttggtcaggagtatgggaggcc-------ca----cagctggtctct-aatgt
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          5133 198 -     80423 tcaccatacctggccctatgtgtctcttctatttgactgttcctgatttgtatcagacagtgcat-------------ataagcaaaatgctttcttgggttctgtgagccattctagcacatta-------tagaacctggggaaggaattcatggaagtcctaatttctagccagttggtcaggagtatgggaggtc-------ca----cagctggtctct-aatgt
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_165776                             16525 198 +     19426 tcatcataccttgccctgtgtgtctcttccatttgactgttcctgatttatatcagagagtaaat-------------ataagcaaaatgcttttttgggttctgtgagccattctagcaaatta-------taggacctggggaagcaatcaatggaacttctaatttctagccagttggtcagaagtatgagaggcc-------ca----tgactggtttct-aatgg
i Alouatta_belzebul.k141_165776                         C 0 C 0
s Alouatta_caraya.k141_664908                                2077 198 -     12443 tcatcataccttgccctatgtgtctcttccatttgactgttcctgatttatatcagagagtaaat-------------ataagtaaaatgcttttttgggttctgtgagccattctagcaaatta-------taggacctggggaagcaatcaatggaacttctaatttatagccagttggtcagaagtatgagaggcc-------ca----tgactggtttct-aatgg
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2476351                             1800 198 +     41985 tcatcataccttgccctatgtgtctcttccatttgactgttcctgatttatatcagagagtaaat-------------ataagcaaaatgcttttttgggttctgtgagccattctagcaaatta-------taggacctggggaagcaatcaatggaacttctaatttctagccagttggtcagaagtatgagaggcc-------ca----tgactggtttct-aatgg
i Alouatta_discolor.k141_2476351                        C 0 C 0
s Alouatta_juara.k141_2534995                                3554 198 +      4011 tcatcataccttgccctatgtgtctcttccatttgactgttcctgatttatatcagagagtaaat-------------ataagtaaaatgcttttttgggttctgtgagccattctagcaaatta-------taggacctggggaagcaatcaatggaacttctaatttatagccagttggtcagaagtatgagaggcc-------ca----tgactggtttct-aatgg
i Alouatta_juara.k141_2534995                           C 0 C 0
s Alouatta_macconnelli.k141_2318944                          1876 198 -     24210 tcatcataccttgccctatgtgtctcttccatttgactgttcctgatttatatcagagagtaaat-------------ataagtaaaatgcttttttgggttctgtgagccattctagcaaatta-------taggacctggggaagcaatcaatggaacttctaatttatagccagttggtcaaaagtatgagaggcc-------ca----tgactggtttct-aatgg
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           28458 198 -     30219 tcatcataccttgccctatgtgtctcttccatttgactgttcctgatttatatcagagagtaaat-------------ataagtaaaatgcttttttgggttctgtgagccattctagcaaatta-------taggacctggggaagcaatcaatggaacttctaatttatagccagttggtcaaaagtatgagaggcc-------ca----tgactggtttct-aatgg
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_2378775                              507 198 +      5328 tcatcataccttgccctatgtgtctcttccatttgactgttcctgatttatatcagagagtaaat-------------ataagcaaaatgcttttttgggttctgtgagccattctagcaaatta-------taggacctggggaagcaatcaatggaacttctaatttatagccagttggtcagaagtatgagaggcc-------ca----tgactggtttct-aatgg
i Alouatta_palliata.k141_2378775                        C 0 C 0
s Alouatta_puruensis.k141_398195                            44648 198 +     45367 tcatcataccttgccctatgtgtctcttccatttgactgttcctgatttatatcagagagtaaat-------------ataagtaaaatgcttttttgggttctgtgagccattctagcaaatta-------taggacctggggaagcaatcaatggaacttctaatttatagccagttggtcagaagtatgagaggcc-------ca----tgactggtttct-aatgg
i Alouatta_puruensis.k141_398195                        C 0 C 0
s Alouatta_seniculus.k141_790278                             3567 198 -      9835 tcatcataccttgccctatgtgtctcttccatttgactgttcctgatttatatcagagagtaaat-------------ataagtaaaatgcttttttgggttctgtgagccattctagcaaatta-------taggacctggggaagcaatcaatggaacttctaatttatagccagttggtcagaagtatgagaggcc-------ca----tgactggtttct-aatgg
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Aotus_azarae.k141_3170768                                 65473 198 +     78111 tcatcatacctttccctatgtgtctcttccacttgactgttcctgatttatatcagagagtaaat-------------ataagcaaagtgttttcttgggttctgtgagccattctagcaaatta-------taggacctggggaagcaatccatggaacttctaatttatagccagttggtcagaagtatgagaggcc-------ca----tgactggtttct-aatgg
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            8419 198 +     22701 tcatcataccttgccctatgtgtctcttccacttgactgttcctgatttatatcagagagtaaat-------------ataagcaaagtgctttcttggattctgtgagccattctagcaaatta-------taggacctggggaagcaatccatggaacttctaatttatagccagttggtcagaagtatgagaggcc-------ca----tgactggtttct-aatgg
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5752377 198 +   9889416 tcatCATACCTTGCCCTATGTGTCTCTTCCACTTGACTGTTCCTGATTTATATCAGAGAGTAAAT-------------ATAAGCAAAGTGCTTTCTTgggttctgtgagccattctagcaaatta-------tagGACCTGGGGAAGCAATCCATGGAACTTCTAATttatagccagttggtcagaagtatGAGAGGCC-------CA----TGACTGGTTTCT-AATGG
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             8975 198 -    104377 tcatcataccttgccctatgtgtctcttccacttgactgttcctgatttatatcagagagtaaat-------------ataagcaaagtgctttcttgggttctgtgagccattctagcaaatta-------taggacctggggaagcaatccatggaacttctaatttatagccagttggtcagaagtatgagaggcc-------ca----tgactggtttct-aatgg
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               8982 198 +     23246 tcatcataccttgccctatgtgtctcttccacttgactgttcctgatttatatcagagagtaaat-------------ataagcaaagtgctttcttgggttctgtgagccattctagcaaatta-------taggacctggggaagcaatccatggaacttctaatttatagccagttggtcagaagtatgagaggcc-------ca----tgactggtttct-aatgg
i Aotus_vociferans.k141_718647                          C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9542268 198 +  39197703 tcatcataccttgccctatgtgtctcttccatttgactgttcctgatttatatcagagagtaaat-------------ataagcaaaatgctttcttgggttctgtgagccattctagcaaatta-------taggacctgaggaagcaatccatggaacttctaatttatagccaattggtcagaagtatgagaggcc-------ca----tgactggtttct-aatgg
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             63541 198 +     85812 tcatcataccttgccctatgtgtctcttccatttgactgttcctgatttatatcagagagtaaat-------------ataagcaaaatgctttcttgggttctgtgagccattctagcaaatta-------taggacctgaggaagcaatccatggaacttctaatttatagccaattggtcagaagtatgagaggcc-------ca----tgactggtttct-aatgg
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                14554 198 +     89302 tcatcataccttgccctatgtgtctcttccatttgactgttcctgatttatatcagagagtaaat-------------ataagcaaaatgctttcttgggttctgtgagccattctagcaaatta-------taggacctgaggaagcaatccatggaacttctaatttatagccaattggtcagaagtatgagaggcc-------ca----tgactggtttct-aatgg
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             19055 198 -     58268 tcatcataccttgccctatgtgtctcttccatttgactgttcctgatttatatcagagagtaaat-------------ataagcaaaatgctttcttgggttctgtgagccattctagcaaatta-------taggacctgaggaagcaatccatggaacttctaatttatagccaattggtcagaagtatgagaggcc-------ca----tgactggtttct-aatgg
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             67049 198 +    119057 tcatcataccttgccctatgtgtctcttccatttgactgttcctgatttatatcagagagtaaat-------------ataagcaaaatgctttcttgggttctgtgagccattctagcaaatta-------taggacctgaggaagcaatccatggaacttctaatttatagccaattggtcagaagtatgagaggcc-------ca----tgactggtttct-aatgg
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               9018 198 -     25888 tcatcataccttgccctatgtgtctcttccatttgactgttcctgatttatttcagagagtaaat-------------ataagcaaaatgctttcttgggttctgtgagccattctagcaaatta-------taggacctgaggaagcaatccatggaacttctaatttatagccaattggtcagaagtatgagaggcc-------ca----tgactggtttct-aatgg
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Cacajao_ayresi.k141_724503                               116922 198 -    171031 tcatcataccttgccctatgcatgtcttccatttgactgttcctgatttatattagggagtaaat-------------ataagcaaagtgctttttttggttctgtgagccattctagcaaatta-------taggacctggggaagcaatccatggatcttctaatttatagccagttggtcagaagtatgagaggcc-------ca----tgactggtttct-aatgg
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 15942 198 +    125063 tcatcataccttgccctatgcgtgtcttccatttgactgttcctgatttatattagggagtaaat-------------ataagcaaagtgctttttttggttctgtgagccattctagcaaatta-------taggacctggggaagcaatccatggatcttctaatttatagccagttggtcagaagtatgagaggcc-------ca----tgactggtttct-aatgg
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                17989 198 -    216513 tcatcataccttgccctatgcgtgtcttccatttgactgttcctgatttatattagggagtaaat-------------ataagcaaagtgctttttttggttctgtgagccattctagcaaatta-------taggacctggggaagcaatccatggatcttctaatttatagccagttggtcagaagtatgagaggcc-------ca----tgactggtttct-aatgg
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       10532 198 -    134917 tcatcataccttgccctatgcatgtcttccatttgactgttcctgatttatattagggagtaaat-------------ataagcaaagtgctttttttggttctgtgagccattctagcaaatta-------taggacctggggaagcaatccatggatcttctaatttatagccagttggtcagaagtatgagaggcc-------ca----tgactggtttct-aatgg
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Cebus_albifrons.Contig22                               18893754 198 -  29618158 tcatcataccttgccctatgtgcctcttccatttgactgttcctgatttatatcagagagtaaat-------------ataagcaaagtgctttcttgggttctgtgagccattctagcaaatta-------taggacctggggaagcaatccatggaatttctaatttatagccagttggtcagaagtatgagaggcc-------ca----tgactggtttct-aatgg
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                11298 198 -     26817 tcatcataccttgccctatgtgcctcttccatttgactgttcctgatttatatcagagagtaaat-------------ataagcaaagtgctttcttgggttctgtgagccattctagcaaatta-------taggacctggggaagcaatccatggaatttctaatttatagccagttggtcagaagtatgagaggcc-------ca----tgactggtttct-aatgg
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                15541 198 +     25043 tcatcataccttgccctatgtgcctcttccatttgactgttcctgatttatatcagagagtaaat-------------ataagcaaagtgctttcttgggttctgtgagccattctagcaaatta-------taggacctggggaagcaatccatggaatttctaatttatagccagttggtcagaagtatgagaggcc-------ca----tgactggtttct-aatgg
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cercocebus_atys.KQ010443.1                              6558463 198 +   6739814 tcaccatacctggccctatGTGTCTCTTCTATCTGACTGTTCCTGATTTGTATCAGACagtacat-------------ataagcaaaatgctttcttgggttctgtgagccatcctagcacatta-------tagaatctggggaaggaatccatggaagtcctaatttatagccagttgttcaggcgtatggGAGGCC-------CA----CAGCTGGTCTCT-GATGt
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      29940 198 +     60454 tcaccatacctggccctatgtgtctcttctatttgactgttcctgatttgtatcagacagtacat-------------ataagcaaaatgctttcttgggttctgtgagccatcctagcacatta-------tagaatctggggaaggaatccatggaagtcctaatttatagccagttggtcaggagtatgggaggcc-------ca----cagctggtctct-gatgt
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          5144 198 -     21101 tcaccatacctggccctatgtgtctcttctatctgactgttcctgatttgtatcagacagtacat-------------ataagcaaaatgctttcttgggttctgtgagccatcctagcacatta-------tagaatctggggaaggaatccatggaagtcctaatttatagccagttggtcaggagtatgggaggcc-------ca----cagctggtctct-gatgt
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         62454 198 -    107033 tcaccatacctggccctatgtgtctcttctatctgactgttcctgatttgtatcagacagtacat-------------ataagcaaaatgctttcttgggttctgtgagccatcctagcacatta-------tagaatctggggaaggaatccatggaagtcctaatttatagccagttggtcaggagtatgggaggcc-------ca----cagctggtctct-gatgt
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        5337 198 -     17608 tcaccatacctggccctacgtgtctcttctatttgactgttcctgatttgtatcagacagtgcat-------------aaaagcaaaatgctttcttgggttctgtgagccatcctagcacatta-------tagaacctggggaaggaatccacggaagtcctaatttctagccagttggtcaggagtatgggaggcc-------ca----cagctggtctct-aatgt
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          2501 198 +     45019 tcaccatacctggccctacgtgtctcttctatttgactgttcctgatttgtatcagacagtgcat-------------aaaagcaaaacgctttcttgggttctgtgagccatcctagcacatta-------tagaacctggggaaggaatccacggaagtcctaatttctagccagttggtcaggagtatgagaggcc-------ca----cagctggtctct-aacgt
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           2566 112 +     15177 tcaccatacctggccctatgtgtctcttctatttgactgttcctgatttgtatcagacagtgcat-------------aaaagcaaaatgctttcttgggttctgtgagccatcctagcacatta---------------------------------------------------------------------------------------------------------
i Cercopithecus_diana.k141_2561715                      C 0 I 84
s Cercopithecus_hamlyni.k141_129805                          5385 198 +     16677 tcaccatacctggccctacgtgtctcttctatttgactgttcctgatttgtatcagacagtgcat-------------ataagcaaaatgctttcttgggttctgtgagccatcctagcacatta-------tagaacctggggaaggaatccatggaagtcctaatttctagccagttggtcaggagtatgggaggcc-------ca----cagctggtctct-aatgt
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           27552 198 +     35983 tcaccatacctggccctatgtgtctcttctatttgactgttcctgatttgtatcagacagtgcat-------------aaaagcaaaatgctttcttgggttctgtgagccatcctagcacatta-------tagaacctggggaaggaatccatggaagtcctaatttctagccagttggtcaggagtatgggaggcc-------ca----cagctggtctcc-aatgt
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11994083 198 +  12117833 tcaccatacctggccctatgtgtctcttctatttgactgttcctgatttgtatcagacagtgcat-------------aaaagcaaaatgctttcctgggttctgtgagccatcctagcacatta-------tagaacctggggaaggaatccacggaagtcctcatttctagccagttggtcaggagtatgggaggcc-------ca----cagctggtctct-aatgt
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46480841 198 +  46592721 tcaccatacctggccctatgtgtctcttctatttgactgttcctgatttgtatcagacagtgcat-------------aaaagcaaaatgctttcttgggttctgtgagccatcctagcacatta-------tagaacctggggaaggaatccatggaagtcctaatttctagccagttggtcaggagtatgggaggcc-------ca----cagctggtctcc-aatgt
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      44395 198 -     45581 tcaccatacctgaccctatgtgtctcttctatttgactgttcctgatttgtatcagacagtgcat-------------aaaagcaaaatgctttcttgggttctgtgagccatcctagcacatta-------tagaacctggggaaggaatccatggaagtcctaatttctagccagttggtcaggagtatgggaggcc-------ca----cagctggtctct-aatgt
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       5397 198 +     35577 tcaccatacctggccctatgtgtctcttctatttgactgttcctgatttgtatcagacagtgcat-------------aaaagcaaaatgctttcttgggttctgtgagccatcctagcacatta-------tagaacctggggaaggaatccatggaagtcctcatttctagccagttggtcaggagtatgggaggcc-------ca----cagctggtctct-aatgt
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        5170 198 -     25661 tcaccatacctggccctatgtgtctcttctatttgactgttcctgatttgtatcagacagtgcat-------------ataagcaaaatgctttcttgggttctgtgagccatcctagcacatta-------tagaacctggggaaggaatccacggaagtcctaatttctagccagttggtcagcagtatgggaggcc-------ca----cagctggtctct-aatgt
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        5149 198 -     17744 tcaccatacctggccctatgtgtctcttctatttgactgttcctgatttgtatcagacagtgcat-------------aaaagcaaaatgctttattgggttctgtgagccatcctagcacatta-------tagaacctggggaaggaatccatggaagtcctaatttctagccagttggtcaggagtatgggaggcc-------ca----cagctggtctcc-aatgt
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        24733 112 +     37128 tcaccatacctggccctatgtgtctcttctatttgactattcctgatttgtatcagacagtgcat-------------aaaagcaaaatgctttcttgggttctgtgagccatcctagcacatta---------------------------------------------------------------------------------------------------------
i Cercopithecus_roloway.k141_2263608                    C 0 I 84
s Cheracebus_lucifer.k141_619653                             8579 198 -     18223 tcatcataccttgccctatgtgtctcttccatttgactgttcctgatttatatcagagagtaaat-------------ataagcaaagtgctttcttgggttctgtgagccattctagcaaatta-------taggacctggggaagcaatccatggaacttctaatttatagcctgttcgtcagaagtatgagaggcc-------cg----tgactggtttct-aatgg
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                               318 198 +    188999 tcatcataccttgccctatgtgtctcttccatttgactgttcctgatttatatcagagagtaaat-------------ataagcaaagtgctttcttgggttctgtgagccattctagcaaatta-------taggacctggggaagcaatccatggaacttctaatttatagcctgttcgtcagaagtatgagaggcc-------ca----tgactggtttct-aatgg
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           44617 198 +     57117 tcatcataccttgccctatgtgtctcttccatttgactgttcctgatttatatcagagagtaaat-------------ataagcaaagtgctttcttgggttctgtgagccattctagcaaatta-------taggacctggggaagcaatccatggaacttctaatttatagcctgttcgtcagaagtatgagaggcc-------ca----tgactggtttct-aatgg
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          49296 198 +     54541 tcatcataccttgccctatgtgtctcttccatttgactgttcctgatttatatcagagagtaaat-------------ataagcaaagtgctttcttgggttctgtgagccattctagcaaatta-------taggacctggggaagcaatccatggaacttctaatttatagcctgttcgtcagaagtatgagaggcc-------ca----tgactggtttct-aatgg
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chiropotes_israelita.k141_1189915                         74103 197 +    196370 tcatcataccttaccctatgcgtgtcttccatttgactgttcctgatttatattagggagtaaat-------------ataagcaaagtgct-ttcttggttctgtgagccattctagcaaatta-------taggacctggggaagcaatccatggaacttctgatttatagccagttggtcagaagtatgagaggcc-------ca----tgactggtttct-aatgg
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          18284 197 +     40510 tcatcataccttaccctatgcgtgtcttccatttgactgttcctgatttatattagggagtaaat-------------ataagcaaagtgct-ttcttggttctgtgagccattctagcaaatta-------taggacctggggaagcaatccatggaacttctgatttatagccagttggtcagaagtatgagaggcc-------ca----tgactggtttct-aatgg
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15142897 198 -  15256731 tcaccatacctggccctatgtgtctcttctatttggctgttcctgatttgtatcagacagtgcat-------------ataagcaaagtgctttcttgggctctgtgaaccatcctagcacatta-------tcgaacctggggaaggaatccatggaagccctaatttctagccagttggtcaggagtatgggaggcc-------ca----cagctggtctct-aatgt
i Chlorocebus_aethiops.ctg22                            I 145 C 0
s Chlorocebus_pygerythrus.k141_1486215                      37361 198 -     53260 tcaccatacctggccctatgtgtctcttctatttgactgttcctgatttgtatcagacagtgcat-------------ataagcaaagtgctttcttgggctctgtgagccatcctagcacatta-------tggaacctggggaaggaatccatggaagccctaatttctagccagttggtcaggagtatgggaggcc-------ca----cagctgatctct-aatgt
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101147920 198 + 101219884 tcaccatacctggccctatGTGTCTCTTCTATTTGACTGTTCCTGATTTGTATCAGACAGTGCAt-------------ataagcaaaatgctttcttgggttctgtgagccatcctagcacatta-------tcgaacctggggaaggaatccatggaagtcctaatttctagccagttggtcaggagtatgggaggcc-------CA----CAGCTGGTCTCT-AATGt
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Erythrocebus_patas.Contig8                             48779931 198 -  48907691 tcaccatacctggccctatgtgtctcttctatttgactgttcctgatttgtatcagacagtgcat-------------ataagcaaaatgctttcttgggttctgtgagccattctagcacatta-------tcgaacctggggaaggaatccatggaagtcctaatttctagccagttggtcaggagtatgggaggcc-------ca----cagctggtctct-aatgt
i Erythrocebus_patas.Contig8                            C 0 C 0
s Gorilla_beringei.k141_111300                               8369 198 -     14630 tcaccatacctggcccgatgtgtgtcttctatttgactattcctgatttgtatcagacagtaaaa-------------gtaagcaaagtgctttcgtgggttctgtgagccatcttagcaaatta-------tagaacctggggaaggaatccatggaagtcctaatttatagccagttggtcaggagtgtgggaggcc-------ca----caactcgtctct-aatgg
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119655469 198 - 195582420 tcaccatacctggcccgatgtgtgtcttctatttgactattcctgatttgtatcagacagtaaaa-------------gtaagcaaagtgctttcgtgggttctgtgagccatcttagcaaatta-------tagaacctggggaaggaatccatggaagtcctaatttatagccagttggtcaggagtgtgggaggcc-------ca----caactcgtctct-aatgg
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Hoolock_leuconedys.ctg1393                                    2403 112 +     16319 tcaccatacctggccctatgtgtctcttctatttgactgttcctgatttgtatcagacagtaact-------------gtaagcaaagtgctttcttgggttctgtgagccgtcttagcaaatta---------------------------------------------------------------------------------------------------------
i Hoolock_leuconedys.ctg1393                               I 291 I 2679
s Hylobates_abbotti.k141_1816750                              828 112 +      3202 tcaccatacctggccctatgtgtctcttctatttgactgttcctgatttgtatcagacagtaact-------------gtaagcaaagtgctttcttgggttctgtgagccgtcttagcaaatta---------------------------------------------------------------------------------------------------------
i Hylobates_abbotti.k141_1816750                        C 0 I 86
s Hylobates_agilis.k141_1633646                               798 112 -      2102 tcaccatacctgaccctatgtgtctcttctatttgactgttcctgatttgtatcagacagtaact-------------gtaagcaaagtgctttcttgggttctgtgagccgtcttagcaaatta---------------------------------------------------------------------------------------------------------
i Hylobates_agilis.k141_1633646                         C 0 I 86
s Hylobates_klossii.k141_468230                              2314 112 +      5464 tcaccatacctgaccctatgtgtctcttctatttgactgttcctgatttgtatcagacagtaact-------------gtaagcaaagtgctttcttgggttctgtgagccgtcttagcaaatta---------------------------------------------------------------------------------------------------------
i Hylobates_klossii.k141_468230                         C 0 I 86
s Hylobates_pileatus_b.ContigUN                                 14627663 112 -  25970782 tcaccatacctggccctatgtgtctcttctatttgactgttcctgatttgtatcagacagtaact-------------gtaagcaaagtgctttcttgggttctgtgagccgtcttagcaaatta---------------------------------------------------------------------------------------------------------
i Hylobates_pileatus_b.ContigUN                                C 0 I 86
s Hylobates_muelleri.k141_1139146                             214 112 +      4161 tcaccatacctgaccctatgtgtctcttctatttgactgttcctgatttgtatcagacagtaact-------------gtaagcaaagtgctttcttgggttctgtgagccgtcttagcaaatta---------------------------------------------------------------------------------------------------------
i Hylobates_muelleri.k141_1139146                       C 0 I 86
s Lagothrix_lagothricha.k141_12968                          53141 198 -    147782 tcatcataccttgccctatatgtctcttccatttgactgtttctgatttatatcagagagtaaat-------------ataagcaaaatgctttcttgggttctgtgagccattctagcaaatta-------taggacctggggaagcaatccatggaacttctaatttatagccagttggtcagaagcatgagaggcc-------ca----tgactggtttca-aatgg
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lophocebus_aterrimus.ctg55                             19251551 198 +  19376315 tcaccatacctggccctatgtgtctcttctatttgactgttcctgatttgtatcagacagtacat-------------ataagcaaaatgctttcttgggttctgtgagccatcctagcacatta-------tagaacctggggaaggaatccatggaagtcctaatttatagccagttggtcaggagtatgggaggcc-------ca----cagctggtctct-aatgt
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Macaca_arctoides.k141_2201161                             23302 198 +     74745 tcaccatacctggccctatgtgtctcttccatgtgactgttcctgatttgtatcagacagtacac-------------ataagcaaaacgctttcttgggttctgtgagccatcctagcacatta-------tagaacctggggaaggaatccatggaagtcctaatttctagccagttggtcaggagtatgggaggcc-------ca----cagctggtctct-aatgt
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12709763 198 +  12821369 tcaccatacctggccctatgtgtctcttccatgtgactgttcctgatttgtatcagacagtacac-------------ataagcaaaacgctttcttgggttctgtgagccatcctagcacatta-------tagaacctggggaaggaatccatggaagtcctaatttctagccagttggtcaggagtatgggaggcc-------ca----cagctggtctct-aatgt
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                2337 198 -     26467 tcactatacctggccctatgtgtctcttctatttgactgttcctgatttgtatcagacagtacat-------------ataagcaaaacgctttcttgggttctgtgagccatcctagcacatta-------tagaacctggggaaggaatccatggaagtcctaatttctagccagttggtcaggagtatgggaggcc-------ca----cagctggtctct-aatgt
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           50208 198 +     63263 tcaccatacctggccctatgtgtctcttctatttgactgttcctgatttgtatcagacagtacat-------------ataagcaaaacgctttcttgggttctgtgagccatcctagcacatta-------tagaacctggggaaggaatccatggaagtcctaatttctagccagttggtcaggagtatgggaggcc-------ca----cagctggtctca-aatgt
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 2318 198 -     26361 tcaccatacctggccctatgtgtctcttctatttgactgttcctgatttgtatcagacagtacat-------------ataagcaaaacgctttcttgggttctgtgagccatcctagcacatta-------tagaacctggggaaggaatccatggaagtcctaatttctagccagttggtcaggagtatgggaggcc-------ca----cagctggtctct-aatgt
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 5495 211 -      7381 tcaccatacctggccctatgtgtctcttctatttgactgttcctgatttgtatcagacagtacatatatattttacatataagcaaaacgctttcttgggttctgtgagccatcctagcacatta-------tagaacctggggaaggaatccatggaagtcctaatttctagccagttggtcaggagtatgggaggcc-------ca----cagctggtctct-aatgt
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  48733 198 -     79256 tcaccatacctggccctatgtgtctcttctatttgactgttcctgatttgtatcagacagtacat-------------ataagcaaaacgctttcttgggttctgtgagccatcctagcacatta-------tagaacctggggaaggaatccatggaagtcctaatttctagccagttggtcaggagtatgggaggcc-------ca----cagctggtctct-aatgt
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196038835 198 + 196197964 tcaccatacctggccctatGTGTCTCTTCTATTTGACTGTTCCTGATTTGTATCAGACAGtacat-------------ataagcaaaacgctttcttgggttctgtgagccatcctagcacatta-------tagaacctggggaaggaatccatggaagtcctaatttctagccagttggtcaggagtatgggaggCC-------CA----CAGCTGGTCTCT-AATGt
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11449001 198 +  11645122 tcaccatacctggccctatGTGTCTCTTCTATTTGACTGTTCCTGATTTGTATCAGACAGTACAT-------------ATAagcaaaacactttcttgggttctgtgagccatcctagcacatta-------tagaacctggggaaggaatccatggaagtcctaatttctagccagttggtcaggagtatgggaggcC-------CA----CAGCTGGTCTCT-AATGt
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   7687 198 -     46448 tcaccatacctgaccctatgtgtctcttctatttgactgttcctgatttgtatcagacagtacat-------------ataagcaaaacgctttcttgggttctgtgagccatcctagcacatta-------tagaacctggggaaggaatccatggaagtcctaatttctagccagttggtcaggagtatgggaggcc-------ca----cagctggtctct-aatgt
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                5353 198 -     13212 tcaccatacctggccctatgtgtctcttctatgtgactgttcctgatttgtatcagacagtacac-------------ataagcaaaacgctttcttgggttctgtgagccatcctagcacatta-------cagaacctggggaaggaatccatggaagtcctaatttctagccagttggtcaggagtatgggaggcc-------ca----cagctggtctca-aatgt
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 19030 198 -     55006 tcaccatacctggccctatgtgtctcttctatttgactgttcctgatttgtatcagacagtacat-------------ataagcaaaacgctttcttgggttctgtgagccatcctggcacatta-------tagaacctggggaaggaatccatggaagtcctaatttctagccagttggtcaggagtatgggaggcc-------ca----cagctggtctct-aatgt
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43844136 211 +  43892939 tcaccatacctggccctatgtgtctcttctatttgactgttcctgatttgtatcagacagtacatatatattttacatataagcaaaacgctttcttgggttctgtgagccatcctagcacatta-------tagaacctggggaaggaatccatggaagtcctaatttctagccagttggtcaggagtatgggaggcc-------ca----cagctggtctct-aatgt
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               20317 198 -     24607 tcaccatacctggccctatgtgtctcttccatgtgactgttcctgatttgtatcagacagtacac-------------ataagcaaaacgctttcttgggttctgtgagccatcctagcacatta-------tagaacctggggaaggaatccatggaagtcctaatttctagccagttggtcaggagtatgggaggcc-------ca----cagctggtctct-aatgt
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               7684 198 -     27140 tcaccatacctggccctatgtgtctcttctatttgactgttcctgatttgtatcagacagtacat-------------ataagcaaaacgctttcttgggttctgtgagccatcctagcacatta-------tagaacctggggaaggaatccatggaagtcctaatttctagccagttggtcaggagtatgggaggcc-------ca----cagctggtctct-aatgt
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43440716 198 -  43563597 tcaccatacctggccctatgtgtctcttctatttgactgttcctgatttgtatcagacagtacat-------------ataagcaaaatgctttcttgggttctgtgagccatcctagcacatta-------tagaatctggggaaggaatccatggaagtcctaatttatagccagttggtcaggagtatgggaggcc-------ca----cagctggtctct-gatgt
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4453528 198 -   4543643 tcaccatacctggccctatgtgtctcttctatttgactgttcctgatttgtattagacagtacat-------------ataagcaaaatgctttattgggttctgtgagccatcctagcacatta-------tagaatctggggaaggaatccatggaagtcctaatttatagccagttggtcaggagtatgggaggcc-------ca----cagctggtctct-gatgt
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         5270 198 +     29742 tcaccatacctggccctatgtgtctcttctatttgactgttcctgatttgtatcagacagtgcat-------------acaagcaaaatgctttcttgggttctgtgagccatcctagcacatta-------cagaacctggggaaggaatccatggaagtcctaatttctagccagttggtcaggaggatgggaggcc-------ca----cagctggtctct-aatgt
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Nomascus_annamensis.k141_224620                            2129 187 -      2316 tcaccatacctggccctatgtgtctcttctatttgactgttcctgatttgtatcagacagtaact-------------gtaagcaaagtgctttcttgggttctgtgagccgtcttagcaaatta-------tagaacctggggaaggaatccatggaagtcctaatttatagccagttggtcaggagtatgggAGGCC-------CA----CAACTC------------
i Nomascus_annamensis.k141_224620                       C 0 n 0
s Nomascus_concolor.k141_226614                              4226 198 -      5092 tcaccatacctggccctatgtgtctcttctatttgactgttcctgatttgtatcagacagtaact-------------gtaagcaaagtgctttcttgggttctgtgagccgtcttagcaaatta-------tagaacctggggaaggaatccatggaagtcctaatttatagccagttggtcaggagtatgggaggcc-------ca----caactcgtctct-aacgg
i Nomascus_concolor.k141_226614                         C 0 I 313
s Nomascus_gabriellae.k141_1032971                           1796 122 -      1918 tcaccatacctggccctatgtgtctcttctatttgactgttcctgatttgtatcagacagtaact-------------gtaagcaaagtgctttcttgggttctgtgagccgtcttagcaaatta-------tagaacctgG----------------------------------------------------------------------------------------
i Nomascus_gabriellae.k141_1032971                      C 0 n 0
s Nomascus_siki_b.tarseq_80                             27978 198 -  18771707 tcaccatacctggccctatgtgtctcttctatttgactgttcctgatttgtatcagacagtaact-------------gtaagcaaagtgctttcttgggttctgtgagccgtcttagcaaatta-------tagaacctggggaaggaatccatggaagtcctaatttatagccagttggtcaggagtatgggaggcc-------ca----caactcgtctc-taacgg
i Nomascus_siki_b.tarseq_80                         C 0 C 0
s Nomascus_siki_a.k141_1035055                                 2539 179 -      3602 tcaccatacctggccctatgtgtctcttctatttgactgttcctgatttgtatcagacagtaact-------------gtaagcaaagtgctttcttgggttctgtgagccgtcttagcaaatta-------tagaacctggggaaggaatccatggaagtcctaatttatagccagttggtcaggagtatgggaggcc-------------------------------
i Nomascus_siki_a.k141_1035055                            C 0 I 19
s Pan_paniscus.CM003386.1                               127577731 198 - 205426864 TCACCATACCTGGCCCGATGTGTGTCTTCTATTTGACTATTCCTGATTTGTATCAGACAgtaaat-------------gtaagcaaagtgctttcgtgggttctgtgagccatcttagcaaagta-------tagaacctggggaaggaatccatggaagtcctaatttacagccagttggtcaggagtgtgggaggcc-------CA----CAACTCATCTCT-AATGG
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.KZ622857.1                               332417 198 +    772158 TCACCATACCTGGCCCTATGTCTCTCTTCTATTTGACAGTTCCTGATTTGTATCAGACAGTaact-------------gtaagcaaagtgctttcttgggttctgtgcgccatcttagcaaatta-------tagaacctggggaaggaatccatggaagtcctaatttatagacagttggtcaggagtatgggaggcc-------cA----CAACTCCTCTCT-AATGG
i Pan_troglodytes.KZ622857.1                            I 4229 C 0
s Papio_anubis.CM001492.2                               188159513 198 - 188283584 tcaccatacctggccctatGTGTCTCTTCTATTTGACTGTTCCTGATTTGTATCAGACAgtacat-------------ataagcagaatgctttcttgggttctgtgagccatcctagcacatta-------tagaacctggggaaggaatccatggaagtcctaatttctagccagttggtcaggagtatgggaggcc-------CA----CAGCTGGTCTCT-AATGt
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              2603 198 +     25005 tcaccatacctggccctatgtgtctcttctatttgactgctcctgatttgtatcagacagtacat-------------ataagcagaatgctttcttgggttctgtgagccatcctagcacatta-------tagaacctggggaaggaatccatggaagtcctaatttctagccagttggtcaggagtatgggaggcc-------ca----cagctggtctct-aatgt
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47516885 198 +  47705337 tcaccatacctggccctatgtgtctcttctatttgactgttcctgatttgtatcagacagtacat-------------ataagcagaatgctttcttgggttctgtgagccatcctagcacatta-------tagaacctggggaaggaatccatggaagtcctaatttctagccagttggtcaggagtatgggaggcc-------ca----cagctggtctct-aatgt
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 70876 198 -    104429 tcaccatacctggccctatgtgtctcttctatttgactgctcctgatttgtatcagacagtacat-------------ataagcagaatgctttcttgggttctgtgagccatcctagcacatta-------tagaacctggggaaggaatccatggaagtcctaatttctagccagttggtcaggagtatgggaggcc-------ca----cagctggtctct-aatgt
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    9408 198 +     14967 tcaccatacctggccctatgtgtctcttctatttgactgttcctgatttgtatcagacagtacat-------------ataagcagaatgctttcttgggttctgtgagccatcctagcacatta-------tagaacctggggaaggaatccatggaagtcctaatttctagccagttggtcaggagtatgggaggcc-------ca----cagctggtctct-aatgt
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 5273 198 -      7628 tcaccatacctggccctatgtgtctcttctatttgactgttcctgatttgtatcagacagtacat-------------ataagcagaatgctttcttgggttctgtgagccatcctagcacatta-------tagaacctggggaaggaatccatggaagtcctaatttctagccagttggtcaggagtatgggaggcc-------ca----cagctggtctct-aatgt
i Papio_ursinus.k141_1345919                            C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       25282 146 +     44506 ----------------------------------------------------tcAGAGAgtaaat-------------ataagcaaagtgctttattgggttctgtgagccattctagcaaatta-------taggacctggggaagcaatccatggaacttctaatttatagcctgttggttagaagtatgagaggcc-------ca----tgactggtttct-aatag
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        25495 146 +     67491 ----------------------------------------------------tcAGAGAgtaaat-------------ataagcaaagtgctttattgggttctgtgagccattctagcaaatta-------taggacctggggaagcaatccatggaacttctaatttatagcctgttggttagaagtatgagaggcc-------ca----tgactggtttct-aatag
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      15734 146 -     98129 ----------------------------------------------------tcAGAGAgtaaat-------------ataagcaaagtgctttattgggttctgtgagccattctagcaaatta-------taggacctggggaagcaatccatggaacttctaatttatagcctgttggttagaagtatgagaggcc-------ca----tgactggtttct-aatag
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     25334 146 +    147771 ----------------------------------------------------tcAGAGAgtaaat-------------ataagcaaagtgctttattgggttctgtgagccattctagcaaatta-------taggacctggggaagcaatccatggaacttctaatttatagcctgttggttagaagtatgagaggcc-------ca----tgactggtttct-aatag
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         1970 146 -     43940 ----------------------------------------------------tcAGAGAgtaaat-------------ataagcaaagtgctttattgggttctgtgagccattctagcaaatta-------taggacctggggaagcaatccatggaacttctaatttatagcctgttggttagaagtatgagaggcc-------ca----tgactggtttct-aatag
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          6053 146 -     55515 ----------------------------------------------------tcAGAGAgtaaat-------------ataagcaaagtgctttattgggttctgtgagccattctagcaaatta-------taggacctggggaagcaatccatggaacttctaatttatagcctgttggttagaagtatgagaggcc-------ca----tgactggtttct-aatag
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         25407 146 +    152463 ----------------------------------------------------tcAGAGAgtaaat-------------ataagcaaagtgctttattgggttctgtgagccattctagcaaatta-------taggacctggggaagcaatccatggaacttctaatttatagcctgttggttagaagtatgagaggcc-------ca----tgactggtttct-aatag
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       3215 146 -    119457 ----------------------------------------------------tcAGAGAgtaaat-------------ataagcaaagtgctttattgggttctgtgagccattctagcaaatta-------taggacctggggaagcaatccatggaacttctaatttatagcctgttggttagaagtatgagaggcc-------ca----tgactggtttct-aatag
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         15130 146 +    134592 ----------------------------------------------------tcAGAGAgtaaat-------------ataagcaaagtgctttattgggttctgtgagccattctagcaaatta-------taggacctggggaagcaatccatggaacttctaatttatagcctgttggttagaagtatgagaggcc-------ca----tgactggtttct-aatag
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          25717 146 -     75465 ----------------------------------------------------tcAGAGAgtaaat-------------ataagcaaagtgctttattgggttctgtgagccattctagcaaatta-------taggacctggggaagcaatccatggaacttctaatttatagcctgttggttagaagtatgagaggcc-------ca----tgactggtttct-aatag
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              190250 198 -    373494 TCACCATACCTGGCCCTATGTGTCTCTTCTGTTTGACTGTTCCTGATTTGTATCAGACAGTAAAT-------------GTAAGCAAAGTGCTTTCGTGGGTTCTGTGAGCCATCTTAGCAAATTA-------TAGAACCTGGGGAAGGAATCCATGGAAGTCCTaatttatagccagttggtcagGAGTATGGGAGGCC-------CA----CAACTCATCTCT-AATGG
i Pongo_abelii.NDHI03003816.1                           C 0 I 1
s Pongo_pygmaeus.ctg62                                   19810897 198 +  19899266 tcaccatacctggccctatgtgtctcttctatttgactgttcctgatttgtatcagacagtaaat-------------gtaagcaaagtgctttcgtgggttctgtgagccatcttagcaaatta-------tagaacctggggaaggaatccatggaagtcctaatttatagccagttggtcaggagtatgggaggcc-------ca----caactcatctct-aatgg
i Pongo_pygmaeus.ctg62                                  C 0 I 1
s Saimiri_boliviensis.NW_024100938.1                     15675701 198 -  43202129 TCATCATACCTTGCCCTATGTGCCTCTTCCATTTGACTGTTCCTGATTTATATCAGAGAGTAAAT-------------ATAAGCAAAGTGCTTTCTTGggttctgtgagccattctagcaaatta-------caCGACCTGGGGAAGCAATCCATGGAACTTCTCATTtatagccagttggtcagaagtatGAGAGGCC-------TG----TGACTGATTGCT-AATGG
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        7614 198 +     34089 tcatcataccttgccctatgtgcctcttccatttgactgttcctgatttatatcagagagtaaac-------------ataagcaaagtgctttcttgggttctgtgagccattctagcaaatta-------cacgacctggggaagcaatccatggaacttctcatttatagccagttggtcagaagaatgagaggcc-------tg----tgactgattgct-aatgg
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              7556 198 -     60842 tcatcataccttgccctatgtgcctcttccatttgactgttcctgatttatatcagagagtaaac-------------ataagcaaagtgctttcttgggttctgtgagccattctagcaaatta-------cacgacctggggaagcaatccatggaacttctcatttatagccagttggtcagaagaatgagaggcc-------tg----tgactgattgct-aatgg
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              7649 198 +     67014 tcatcataccttgccctatgtgcctcttccatttgactgttcctgatttatatcagagagtaaac-------------ataagcaaagtgctttcttgggttctgtgagccattctagcaaatta-------cacgacctggggaagcaatccatggaacttctcatttatagccagttggtcagaagaatgagaggcc-------tg----tgactgattgct-aatgg
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              7627 198 +     60816 tcatcataccttgccctatgtgcctcttccatttgactgttcctgatttatatcagagagtaaac-------------ataagcaaagtgctttcttgggttctgtgagccattctagcaaatta-------cacgacctggggaagcaatccatggaacttctcatttatagccagttggtcagaaggatgagaggcc-------tg----tgactgattgct-aatgg
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 7564 198 -     76454 tcatcataccttgccctatgtgcctcttccatttgactgttcctgatttatatcagagagtaaac-------------ataagcaaagtgctttcttgggttctgtgagccattctagcaaatta-------catgacctggggaagcaatccatggaacttctcatttatagccagttggtcagaagaatgagaggcc-------tg----tgactgattgct-aatgg
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17344340 198 -  30362882 tcatcataccttgccctatgtgcctcttccatttgactgttcctgatttatatcagagagtaaat-------------ataagcaaagtgctttcttgggttctgtgagccattctagcaaatta-------taggacctggggaagcaatccatggaatttctaatttatagccagttggtcagaagtatgagaggcc-------ca----tgactggtttct-aatgg
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         23661 198 -     62485 tcatcataccttgccctatgtgcctcttccatttgactgttcctgatttatatcagagagtaaat-------------ataagcaaagtgctttcttgggttctgtgagccattctagcaaatta-------taggacctggggaagcaatccatggaatttctaatttatagccagttggtcagaagtatgagaggcc-------ca----tgactggtttct-aatgg
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        17923 198 -  13920577 tcaccatacctggccctgtgtgtctcttctatttgactgttcctgatttgtatcagacagtaact-------------gtaagcaaagtgctttcttgggttctgtgagccgtcttagcaaatta-------tagaacctggggaaggaatccatggaagtcctaatttatagccagttggtcaggagtatgggaggcc-------ca----caactcgtctct-aacgg
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Theropithecus_gelada.CM009951.1                       194011045 198 - 194193292 tcaccatacctggccctatGTGTCTCTTCTATTTGACTGTTCCTGATTTGTATCAGACAgtacat-------------ataagcaaaatgctttcttgggttctgtgagccatcctagcacatta-------tagaacctggggaaggaatccatggaagtcctAAtttatagccagttggtcagGAGTATGGGAGGCC-------CA----CAGCTGGTCTCT-AATGt
i Theropithecus_gelada.CM009951.1                       C 0 C 0
e Eptesicus_fuscus.JH977687.1                             4708429 237 +   6522550 I
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590  76 -     47444 I
e Petromus_typicus.PetTyp_scaffold_33007                    16921   0 -     36578 C
e Sorex_araneus.JH798170.1                               17769647   0 -  27805282 C
e Dinomys_branickii.DinBra_scaffold_1996                   158442 1030 +    228994 I
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           4051 456 -      6963 I
e Oryctolagus_cuniculus.CM000803.1                      141878516 2929 + 163896628 I
e Ochotona_princeps.JH802095.1                            4996729 2205 -  23139505 I
e Lepus_americanus.LepAme_scaffold_62849                    15480 2946 +     22452 I
e Perognathus_longimembris.PerPac_flattened_line_19359       1614  38 +     49596 I
e Dipodomys_stephensi.DipSte_scaffold_84338                  1789  28 -     11986 I
e Dipodomys_ordii.KN672545.1                              3659429  30 +   4240102 I
e Suricata_suricatta.SurSur_flattened_line_20339            32401   0 +     62062 C
e Ziphius_cavirostris.ZipCav_flattened_line_60625            1538   2 -     13665 I
e Zalophus_californianus.ZalCal_flattened_line_4097        219280   0 -    227762 C
e Vulpes_lagopus.VulLag_flattened_line_2045                143835   0 -    281493 C
e Vicugna_pacos.KN269600.1                                1527832   0 -   2331223 C
e Ursus_maritimus.KK498671.1                              6519892   0 +  28682327 C
e Uropsilus_gracilis.UroGra_scaffold_69449                   9768   0 +     10241 C
e Tursiops_truncatus.MRVK01000923.1                      69316794   2 -  96451834 I
e Trichechus_manatus.JH594618.1                          16088878   0 +  31416278 C
e Tragulus_javanicus.TraJav_scaffold_14717                   9149   2 +     90398 I
e Tonatia_saurophila.TonSau_scaffold_3334                  137563 275 -    259118 I
e Tapirus_terrestris.TapTer_scaffold_14939                  61041   0 +     99546 C
e Tapirus_indicus.TapInd_scaffold_176                      810399   0 +   1148477 C
e Tamandua_tetradactyla.TamTet_scaffold_26877               16259 379 +     45698 I
e Tadarida_brasiliensis.TadBra_scaffold_61492                1822 242 +     20549 I
e Sus_scrofa.CM000824.4                                 189273670 1086 + 218635234 I
e Spilogale_gracilis.SpiGra_flattened_line_905             238244   0 -    276980 C
e Solenodon_paradoxus.SolPar_flattened_line_1012            23185   0 +    739146 C
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   39231   0 -    114521 C
e Saiga_tatarica.SaiTat_scaffold_1069354                      105   0 -       709 C
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Rhinolophus_sinicus.LVEH01000179.1                      1792212   2 +   2252614 I
e Rangifer_tarandus.RanTarSib_scaffold_24239                20109   0 +     68503 C
e Puma_concolor.QAVW01000427.1                          131539433   0 - 161321710 C
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Pteronura_brasiliensis.PteBra_flattened_line_1343        249686   0 -    344369 C
e Pteronotus_parnellii.KE867983.1                            5588 252 -     27784 I
e Procavia_capensis.ProCapCap_scaffold_11797                50321   0 -     88779 C
e Platanista_gangetica.PlaMin_flattened_line_72990           8998   2 +     21690 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Phocoena_phocoena.PhoPho_flattened_line_53071              2530   2 +      8220 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    120818   0 -    135482 C
e Pantholops_hodgsonii.KE114631.1                         1071126   0 -   1292953 C
e Panthera_tigris.KE721879.1                              5032785   0 -   6340057 C
e Panthera_pardus.KV860323.1                              3643137   0 +  18214204 C
e Panthera_onca.PanOnc_flattened_line_1615                  39322   0 +    295523 C
e Ovis_canadensis.OviCan_scaffold_6251                      83485   0 +    140051 C
e Ovis_aries.CM001582.2                                 134082257   0 - 275406953 C
e Otocyon_megalotis.JAEUCK010005121.1                      314612   0 -    505867 C
e Orycteropus_afer.OryAfe_flattened_line_13509              63439   0 -     66828 C
e Orcinus_orca.KB316965.1                                 7228065   2 -   7562323 I
e Okapia_johnstoni.LVCL01S0017931.1                         41334   0 +     78940 C
e Odocoileus_virginianus.KZ101650.1                       1083245   0 +   1425656 C
e Odobenus_rosmarus.KB229369.1                             684428   0 -   3126709 C
e Nyctereutes_procyonoides.CAJHUB010000786.1                37467   0 +   3668941 C
e Noctilio_leporinus.NocLep_scaffold_12062                  50214  77 +     94413 I
e Neophocaena_asiaeorientalis.KZ688543.1                  3954389   2 -   4490290 I
e Neomonachus_schauinslandi.NINY01007774.1                4489721   0 -  14209539 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             6589 379 -      8794 I
e Myotis_myotis.MyoMyo_scaffold_6123                        13515 236 +     66751 I
e Myotis_lucifugus.GL429887.1                             3468272 238 -   3747815 I
e Myotis_davidii.KB114863.1                               5022194 233 +   6462685 I
e Myotis_brandtii.KE161952.1                               970769 237 +   8389877 I
e Mustela_putorius.JH417978.1                             4427567   0 -  28371801 C
e Murina_feae.MurFea_scaffold_2254                          23900 236 -    100666 I
e Mungos_mungo.MunMun_flattened_line_8729                  149746   0 -    168139 C
e Moschus_moschiferus.MosMos_scaffold_78805                  5813   0 -     19904 C
e Mormoops_blainvillei.MorMeg_scaffold_2952                162937 259 +    265003 I
e Monodon_monoceros.MonMon_M_scaffold_5598                 149798   2 +    154973 I
e Mirounga_angustirostris.MirAng_flattened_line_8852        16322   0 -    104932 C
e Miniopterus_schreibersii.MinSch_scaffold_24116            36998 214 +     45743 I
e Miniopterus_natalensis.LDJU01000022.1                   8212509 213 +  10048721 I
e Micronycteris_hirsuta.MicHir_scaffold_37978               24387 274 -     32043 I
e Microgale_talazaci.MicTal_scaffold_34660                  40768   0 -     48017 C
e Mesoplodon_bidens.MesBid_scaffold_96348                    2003   2 -     12939 I
e Mellivora_capensis.MelCap_flattened_line_15433             5726   0 -     87323 C
e Megaderma_lyra.MegLyr_scaffold_3562                       65026   2 -    234502 I
e Manis_pentadactyla.KN017078.1                             39380   0 +     58827 C
e Manis_javanica.JSZB01003966.1                            149232   0 +    252755 C
e Lycaon_pictus.CM007556.1                               11094608   0 +  39895028 C
e Loxodonta_africana.GL010040.1                          20597894   0 -  62548349 C
e Lipotes_vexillifer.KE558548.1                            139369   2 +   3060487 I
e Leptonychotes_weddellii.KB714749.1                      3090826   0 -   3498232 C
e Lasiurus_borealis.LasBor_scaffold_59542                    5042 241 +     26176 I
e Kogia_breviceps.KogBre_flattened_line_35920               26998   2 +     37189 I
e Inia_geoffrensis.IniGeo_flattened_line_66725              12417   2 +     17520 I
e Hyaena_hyaena.HyaHya_flattened_line_20729                 22640   0 -     67322 C
e Hipposideros_galeritus.HipGal_scaffold_52959                377   2 +     26078 I
e Hipposideros_armiger.JXIK01001085.1                      282608   2 -    477199 I
e Hippopotamus_amphibius.HipAmp_scaffold_1308              150208   0 +    277961 C
e Heterohyrax_brucei.HetBruBak_scaffold_13814               68359   0 -    108006 C
e Hemitragus_hylocrius.HemHyl_scaffold_16669                32467   0 -     91191 C
e Helogale_parvula.HelPar_flattened_line_22962              22066   0 +     53719 C
e Giraffa_tippelskirchi.LVKQ01S012154.1                    185599   0 -    189561 C
e Felis_nigripes.FelNig_flattened_line_8080                 26394   0 +     52776 C
e Felis_catus_fca126.CM031420.1                         129285299   0 - 158578461 C
e Eubalaena_japonica.EubJap_flattened_line_7756             64881   0 +     89355 C
e Eschrichtius_robustus.EscRob_flattened_line_685          318424   0 +    330699 C
e Equus_przewalskii.ATBW01073585.1                          16166   0 +     92910 C
e Equus_caballus.CM000402.2                              13354676   0 +  41866177 C
e Equus_asinus.JREZ01000062.1                             5856176   0 -   7175178 C
e Enhydra_lutris.KZ291749.1                              85876835   0 +  99434291 C
e Elephantulus_edwardii.JH947210.1                        7830035 1277 +  15467074 I
e Elaphurus_davidianus.JRFZ01086400.1                     1495795   0 +   1727528 C
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Echinops_telfairi.JH980316.1                           22999931   2 -  44670279 I
e Diceros_bicornis.DicBicMic_scaffold_9545                   6452   0 +    151128 C
e Dicerorhinus_sumatrensis.PEKH010003161.1                 325812   0 +    993696 C
e Desmodus_rotundus.KZ672188.1                           18700517 262 -  18957592 I
e Delphinapterus_leucas.KZ290064.1                       80040207   0 -  96802777 C
e Dasypus_novemcinctus.JH568778.1                          185121 383 -   6883506 I
e Cryptoprocta_ferox.CryFer_flattened_line_19014            56919   0 -     70449 C
e Crocidura_indochinensis.CroInd_scaffold_27484              1226   0 -     22648 C
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1337   2 -      5782 I
e Condylura_cristata.JH655880.1                          60621791   0 +  78930452 C
e Choloepus_hoffmanni.KN194586.1                           763329 503 +    964067 I
e Choloepus_didactylus.ChoDid_scaffold_36182                18024 504 -     21363 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_160623         6920   0 -      9338 C
e Catagonus_wagneri.CatWag_scaffold_1305                   162277   0 -    276539 C
e Carollia_perspicillata.CarPer_scaffold_4436               61226 261 +     67245 I
e Capra_hircus.CM004562.1                               135711414   0 - 157403528 C
e Capra_aegagrus.CM003214.1                              21330197   0 + 157394656 C
e Canis_lupus_orion.HG994411.1                           16461937   0 -  44759192 C
e Canis_lupus_familiaris.chr31                           11095152   0 +  39895921 C
e Canis_lupus_dingo.QKWQ01001993.1                       11272441   0 -  35597290 C
e Canis_lupus_VD.CanFam_VD_scaffold_16982                   20732   0 +     87036 C
e CanFam4.chr31                                          11525758   0 +  39901454 C
e Camelus_ferus.KB016973.1                                2976160   0 +   6889770 C
e Camelus_dromedarius.KN271192.1                           400424   0 -  15254737 C
e Camelus_bactrianus.KN276303.1                           3222722   0 -   8989139 C
e Bubalus_bubalis.KI419065.1                               674242   0 +   1914593 C
e Bos_taurus.CM000177.6                                  22664479   0 + 158972876 C
e Bos_mutus.JH883513.1                                     418090   0 +    998990 C
e Bos_indicus.CM003021.1                                 22955825   0 + 161108492 C
e Bison_bison.KN264915.1                                   301727   0 -   6870073 C
e Beatragus_hunteri.BeaHun_scaffold_21644                   47579   0 -     72089 C
e Balaenoptera_bonaerensis.DF502048.1                        8754   0 -     13118 C
e Balaenoptera_acutorostrata.KI537095.1                  26383581   0 +  51448160 C
e Artibeus_jamaicensis.ArtJam_scaffold_41619                10440 261 -     29036 I
e Antilocapra_americana.AntAmePen_scaffold_27338             2548   0 +     55446 C
e Anoura_caudifer.AnoCau_scaffold_422                      392020 257 -    631301 I
e Ammotragus_lervia.NIVO01013474.1                        3525117   0 +   4113121 C
e Ailurus_fulgens.LNAC01000003.1                          7099380   0 -  16596857 C
e Ailuropoda_melanoleuca.LNAT01000321.1                  10662594   0 +  23371972 C
e Acinonyx_jubatus.LLWD01000356.1                         2038912   0 +   3721120 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           20901   0 -    119109 C
e Glis_glis.GliGli_scaffold_79770                           15993   0 -     18683 C
e Zapus_hudsonius.ZapHud_scaffold_64392                     20218   0 -     20485 C
e Jaculus_jaculus.JH725517.1                              8577088   0 +  11848649 C
e Hylobates_pileatus_a.tarseq_592                             35692  75 -     60944 I
e Allactaga_bullata.AllBul_scaffold_70162                   21404   0 -     22067 C
e Galeopterus_variegatus.GalVar_scaffold_354               159184   0 +    324696 C
e Microtus_ochrogaster.CM001673.1                        22823881   0 -  98408828 C
e Xerus_inauris.XerIna_scaffold_7898                       128400 2868 -    134049 I
e Varecia_variegata.k141_775891                             27530   0 -     33872 C
e Varecia_rubra.k141_432109                                  7995   0 -     20643 C
e Tupaia_tana.TupTan_flattened_line_68454                    9338   0 +     13056 C
e Tupaia_chinensis.KB320831.1                             2797404   0 -   3938065 C
e Trachypithecus_pileatus.k141_1022309                       5226   0 +     13828 C
e Trachypithecus_phayrei.ctg3                            44662914   0 -  44834318 C
e Trachypithecus_obscurus.k141_1115109                       8130   0 -     28054 C
e Trachypithecus_melamera.k141_699241                        2986   0 -     24393 C
e Trachypithecus_leucocephalus.k141_381681                   3005   0 +     12481 C
e Trachypithecus_laotum.k141_760702                          4719   0 +     14371 C
e Trachypithecus_hatinhensis.k141_504423                     6067   0 -     15592 C
e Trachypithecus_germaini.k141_868450                        3883   0 -     11566 C
e Trachypithecus_geei.k141_670367                           46082   0 -     54611 C
e Trachypithecus_francoisi.k141_768164                       4689   0 -     14244 C
e Trachypithecus_cristatus.k141_1011511                      5261   0 -     12939 C
e Trachypithecus_crepusculus.k141_1588528                   23360   0 -     32910 C
e Trachypithecus_auratus.k141_738098                        29800   0 +     38948 C
e Tarsius_wallacei.k141_48636                               60532 3805 +     65473 I
e Tarsius_lariang.k141_609102                               27216 3812 +     42269 I
e Spermophilus_dauricus.KZ294190.1                        2243603   0 +   2842873 C
e Sigmodon_hispidus.SigHis_scaffold_11332                  104689   0 -    120886 C
e Semnopithecus_vetulus.k141_1143185                        16479   0 +     30600 C
e Semnopithecus_schistaceus.k141_387461                     33457   0 +     42640 C
e Semnopithecus_priam.k141_410937                           40312   0 +     46263 C
e Semnopithecus_johnii.k141_785014                         121532   0 +    130994 C
e Semnopithecus_hypoleucos.k141_761524                      11528   0 +     20762 C
e Semnopithecus_entellus.k141_1572367                        6153   0 +     15331 C
e Rhinopithecus_strykeri.ctg4                            44859307   0 -  45163003 C
e Rhinopithecus_bieti.k119_554384                            2917   0 -     17045 C
e Rattus_norvegicus.chr11                                13917336   0 +  90463843 C
e Pygathrix_nigripes_a.k141_101123                             8537   0 +     18040 C
e Pygathrix_nigripes_b.ctg79                                 6809148   0 +   6970761 C
e Pygathrix_cinerea.k141_374971                             32651   0 +     56732 C
e Psammomys_obesus.NESX01026517.1                           37921   0 +     77221 C
e Propithecus_verreauxi.k141_158021                         42002   0 -     48185 C
e Propithecus_tattersalli.k141_907138                       19738   0 -     53241 C
e Propithecus_perrieri.k141_7554                            20103   0 +     27322 C
e Propithecus_edwardsi.k141_1317105                         38180   0 -     44753 C
e Propithecus_diadema.k141_577245                           45793   0 +     52369 C
e Propithecus_coronatus.k141_1353159                         6446   0 +     11805 C
e Propithecus_coquerelli.NW_012147863.1                     20390   0 -     30946 C
e Prolemur_simus.MPIZ01000048.1                           6851355   0 +  12164890 C
e Presbytis_mitrata.k141_860013                              8661   0 +     14865 C
e Presbytis_comata.k141_672698                               8546   0 -     15069 C
e Pithecia_vanzolinii.k141_831006                           15424   0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514   0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521   0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292   0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093   0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038   0 +     78826 C
e Pithecia_albicans.k141_991845                             45662   0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000036.1               26743271   0 +  26888534 C
e Piliocolobus_kirkii.k141_929665                            4788   0 +      7694 C
e Piliocolobus_gordonorum.k141_1270531                       5421   0 -     17985 C
e Piliocolobus_badius.k141_1987485                           4802   0 -      5908 C
e Peromyscus_maniculatus.KI615518.1                       4955125   0 -   8017169 C
e Perodicticus_potto.k141_1136815                           10207   0 +     61070 C
e Perodicticus_ibeanus.k141_117958                           9080   0 -     23713 C
e Otolemur_garnettii.GL873528.1                          18011493   0 -  38779656 C
e Otolemur_crassicaudatus.k141_505435                        3512   0 -     53940 C
e Onychomys_torridus.OnyTor_scaffold_12578                  42756   0 +     62360 C
e Ondatra_zibethicus.OndZib_scaffold_6821                  130071   0 +    145789 C
e Octodon_degus.JH651621.1                                3687420 1881 +  10294119 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65678347   0 +  89412551 C
e Nycticebus_coucang.k141_771591                            13545   0 +     16181 C
e Nycticebus_bengalensis.LG16                            65570136   0 -  95554990 C
e Nasalis_larvatus.k141_153429                              11264   0 +     48152 C
e Nannospalax_galili.KL201303.1                            119867   0 +    362372 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     91920 1922 -    117718 I
e Muscardinus_avellanarius.MusAve_scaffold_9643             14525   0 +     98495 C
e Mus_spretus.CM004110.1                                 74336277   0 +  97876770 C
e Mus_pahari.LT608305.1                                  67559927   0 +  89017189 C
e Mus_musculus.chr16                                     75493550   0 +  98207768 C
e Mus_caroli.LT608236.1                                  70771497   0 +  92629107 C
e Mirza_zaza.k141_593947                                     4089   0 -     12809 C
e Microcebus_murinus.CM007691.1                          16513035   0 +  47401472 C
e Mesocricetus_auratus.KB708139.1                         1051192   0 -  26018355 C
e Meriones_unguiculatus.MerUng_scaffold_52233               15570   0 +     15977 C
e Marmota_marmota.CZRN01000005.1                         36877588   0 +  64221397 C
e Loris_tardigradus.ctg97                                 3781302   0 +   6799190 C
e Loris_lydekkerianus.k141_550999                           13563   0 +     84689 C
e Lepilemur_septentrionalis.k141_710646                      1084   0 -     13103 C
e Lepilemur_ruficaudatus.k141_574529                        35037   0 -     38897 C
e Lepilemur_dorsalis.k141_134267                            56656   0 +     63517 C
e Lepilemur_ankaranensis.k141_884009                        27292   0 +     39228 C
e Lemur_catta.scaffold_1                                258409979   0 - 285822530 C
e Indri_indri.k141_2197838                                    116   0 +      3484 C
e Ictidomys_tridecemlineatus.JH393315.1                   7129728   0 +  13083262 C
e Hystrix_cristata.HysCri_scaffold_50788                     7688 1865 +     22540 I
e Heterocephalus_glaber.JH602058.1                        2560252   0 +  31725842 C
e Hapalemur_occidentalis.k141_797938                        48308   0 -     54384 C
e Hapalemur_meridionalis.k141_186231                        31681   0 -     42470 C
e Hapalemur_griseus.k141_1387522                             8432   0 +     56096 C
e Hapalemur_gilberti.k141_279011                             3105   0 -     11661 C
e Hapalemur_alaotrensis.k141_1280836                         4627   0 +     10286 C
e Graphiurus_murinus.GraMur_scaffold_4493                   79386   0 +    118900 C
e Galagoides_demidoff.k141_1769638                          13144   0 +     27357 C
e Galago_senegalensis.k141_964197                           16038   0 -     43889 C
e Galago_moholi.ctg555                                     213680   0 -    847004 C
e Fukomys_damarensis.KN123630.1                          13895732   0 -  19261668 C
e Eulemur_sanfordi.k141_186399                              18623   0 -     29447 C
e Eulemur_rufus.k141_1620292                                35891   0 +     46535 C
e Eulemur_rubriventer.k141_411740                           21157   0 +     26808 C
e Eulemur_mongoz.k141_825972                                18693   0 +     27497 C
e Eulemur_macaco.k141_747087                                 2027   0 -     19505 C
e Eulemur_fulvus.k141_653297                                14043   0 +    109717 C
e Eulemur_flavifrons.k141_903901                            10560   0 +     60246 C
e Eulemur_coronatus.k141_3240342                            14235   0 +     36558 C
e Eulemur_collaris.k141_1015201                              1102   0 -      4292 C
e Eulemur_albifrons.k141_715837                              7832   0 +     13586 C
e Ellobius_talpinus.LOJH01198462.1                           1213   0 -      1901 C
e Ellobius_lutescens.LOEQ01003611.1                        243471   0 -    369425 C
e Dolichotis_patagonum.DolPat_scaffold_14102                39604   0 -     73477 C
e Daubentonia_madagascariensis.ctg11                     16847687   0 +  31942871 C
e Dasyprocta_punctata.DasPun_flattened_line_634             61584   0 -    236241 C
e Cuniculus_paca.CunPac_flattened_line_16637                20446   0 +     26546 C
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 32592 1717 -     67205 I
e Ctenodactylus_gundi.CteGun_scaffold_447                  213664   0 -    956709 C
e Cricetulus_griseus.LT883672.1                          53034667   0 +  72327488 C
e Cricetomys_gambianus.CriGam_scaffold_949                 282297   0 -    399297 C
e Colobus_polykomos.k141_1406057                            19335   0 +     23629 C
e Colobus_guereza.LG08                                  147667351   0 + 156195979 C
e Colobus_angolensis.KN985967.1                          10889423   0 +  10971483 C
e Chinchilla_lanigera.JH721867.1                         15963245 964 +  43084221 I
e Cheirogaleus_medius.k141_133808                           10871   0 +     13308 C
e Cheirogaleus_major.k141_1157592                           61827   0 -     68416 C
e Cephalopachus_bancanus.k141_702587                         8788 3391 +     21754 I
e Cavia_tschudii.CavTsc_scaffold_488                       177725 1742 +    436027 I
e Cavia_porcellus.DS562889.1                             15799553 1742 -  24440124 I
e Cavia_aperea.AVPZ01000278.1                            15787615 1741 -  24422027 I
e Carlito_syrichta.NW_007248099.1                          309764 3411 +    345090 I
e Avahi_peyrierasi.k141_798820                               3156   0 +      6337 C
e Avahi_laniger.k141_2840928                                 9540   0 -     16375 C
e Arctocebus_calabarensis.k141_587554                        4710   0 +      9265 C
e Acomys_cahirinus.AcoCah_scaffold_1625                    117433   0 -    189883 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               16853 3 +    209709 t-------gg
s Gorilla_beringei.k141_111300                               8567 3 -     14630 t-------tg
i Gorilla_beringei.k141_111300                          C 0 I 8
s Gorilla_gorilla.LT578340.1                            119655667 3 - 195582420 t-------tg
i Gorilla_gorilla.LT578340.1                            C 0 I 8
s Hoolock_leuconedys.ctg903                                    12557 2 -     61166 t-------g-
i Hoolock_leuconedys.ctg903                                I 212 C 0
s Hylobates_abbotti.k141_1816750                             1026 2 +      3202 t-------g-
i Hylobates_abbotti.k141_1816750                        I 86 C 0
s Hylobates_agilis.k141_1633646                               996 2 -      2102 t-------g-
i Hylobates_agilis.k141_1633646                         I 86 C 0
s Hylobates_klossii.k141_468230                              2512 2 +      5464 t-------g-
i Hylobates_klossii.k141_468230                         I 86 C 0
s Hylobates_pileatus_b.ContigUN                                 14627861 2 -  25970782 t-------g-
i Hylobates_pileatus_b.ContigUN                                I 86 C 0
s Hylobates_muelleri.k141_1139146                             412 2 +      4161 t-------g-
i Hylobates_muelleri.k141_1139146                       I 86 C 0
s Nomascus_annamensis.k141_1817463                            148 2 -      1070 t-------g-
i Nomascus_annamensis.k141_1817463                      n 0 C 0
s Nomascus_concolor.k141_70405                                151 2 +      1153 t-------g-
i Nomascus_concolor.k141_70405                          n 313 C 0
s Nomascus_gabriellae.k141_1400361                             83 2 -      2203 t-------g-
i Nomascus_gabriellae.k141_1400361                      n 0 I 45
s Nomascus_siki_b.tarseq_80                             28176 2 -  18771707 t-------g-
i Nomascus_siki_b.tarseq_80                         C 0 n 0
s Nomascus_siki_a.k141_1035055                                 2737 2 -      3602 t-------g-
i Nomascus_siki_a.k141_1035055                            I 19 I 312
s Pan_paniscus.CM003386.1                               127577929 3 - 205426864 T-------TG
i Pan_paniscus.CM003386.1                               C 0 I 1
s Pan_troglodytes.KZ622857.1                               332615 3 +    772158 T-------GG
i Pan_troglodytes.KZ622857.1                            C 0 C 0
s Pongo_abelii.NDHI03003816.1                              190449 2 -    373494 T-------G-
i Pongo_abelii.NDHI03003816.1                           I 1 C 0
s Pongo_pygmaeus.ctg62                                   19811096 2 +  19899266 t-------g-
i Pongo_pygmaeus.ctg62                                  I 1 C 0
s Symphalangus_syndactylus.tarseq_24                        18121 2 -  13920577 t-------g-
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
e Eptesicus_fuscus.JH977687.1                             4708429 237 +   6522550 I
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Petromus_typicus.PetTyp_scaffold_33007                    16921 0 -     36578 C
e Sorex_araneus.JH798170.1                               17769647 0 -  27805282 C
e Dinomys_branickii.DinBra_scaffold_1996                   158442 1030 +    228994 I
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           4051 456 -      6963 I
e Oryctolagus_cuniculus.CM000803.1                      141878516 2929 + 163896628 I
e Ochotona_princeps.JH802095.1                            4996729 2205 -  23139505 I
e Lepus_americanus.LepAme_scaffold_62849                    15480 2946 +     22452 I
e Perognathus_longimembris.PerPac_flattened_line_19359       1614 38 +     49596 I
e Dipodomys_stephensi.DipSte_scaffold_84338                  1789 28 -     11986 I
e Dipodomys_ordii.KN672545.1                              3659429 30 +   4240102 I
e Suricata_suricatta.SurSur_flattened_line_20339            32401 0 +     62062 C
e Ziphius_cavirostris.ZipCav_flattened_line_60625            1538 2 -     13665 I
e Zalophus_californianus.ZalCal_flattened_line_4097        219280 0 -    227762 C
e Vulpes_lagopus.VulLag_flattened_line_2045                143835 0 -    281493 C
e Vicugna_pacos.KN269600.1                                1527832 0 -   2331223 C
e Ursus_maritimus.KK498671.1                              6519892 0 +  28682327 C
e Uropsilus_gracilis.UroGra_scaffold_69449                   9768 0 +     10241 C
e Tursiops_truncatus.MRVK01000923.1                      69316794 2 -  96451834 I
e Trichechus_manatus.JH594618.1                          16088878 0 +  31416278 C
e Tragulus_javanicus.TraJav_scaffold_14717                   9149 2 +     90398 I
e Tonatia_saurophila.TonSau_scaffold_3334                  137563 275 -    259118 I
e Tapirus_terrestris.TapTer_scaffold_14939                  61041 0 +     99546 C
e Tapirus_indicus.TapInd_scaffold_176                      810399 0 +   1148477 C
e Tamandua_tetradactyla.TamTet_scaffold_26877               16259 379 +     45698 I
e Tadarida_brasiliensis.TadBra_scaffold_61492                1822 242 +     20549 I
e Sus_scrofa.CM000824.4                                 189273670 1086 + 218635234 I
e Spilogale_gracilis.SpiGra_flattened_line_905             238244 0 -    276980 C
e Solenodon_paradoxus.SolPar_flattened_line_1012            23185 0 +    739146 C
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   39231 0 -    114521 C
e Saiga_tatarica.SaiTat_scaffold_1069354                      105 0 -       709 C
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Rhinolophus_sinicus.LVEH01000179.1                      1792212 2 +   2252614 I
e Rangifer_tarandus.RanTarSib_scaffold_24239                20109 0 +     68503 C
e Puma_concolor.QAVW01000427.1                          131539433 0 - 161321710 C
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Pteronura_brasiliensis.PteBra_flattened_line_1343        249686 0 -    344369 C
e Pteronotus_parnellii.KE867983.1                            5588 252 -     27784 I
e Procavia_capensis.ProCapCap_scaffold_11797                50321 0 -     88779 C
e Platanista_gangetica.PlaMin_flattened_line_72990           8998 2 +     21690 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Phocoena_phocoena.PhoPho_flattened_line_53071              2530 2 +      8220 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    120818 0 -    135482 C
e Pantholops_hodgsonii.KE114631.1                         1071126 0 -   1292953 C
e Panthera_tigris.KE721879.1                              5032785 0 -   6340057 C
e Panthera_pardus.KV860323.1                              3643137 0 +  18214204 C
e Panthera_onca.PanOnc_flattened_line_1615                  39322 0 +    295523 C
e Ovis_canadensis.OviCan_scaffold_6251                      83485 0 +    140051 C
e Ovis_aries.CM001582.2                                 134082257 0 - 275406953 C
e Otocyon_megalotis.JAEUCK010005121.1                      314612 0 -    505867 C
e Orycteropus_afer.OryAfe_flattened_line_13509              63439 0 -     66828 C
e Orcinus_orca.KB316965.1                                 7228065 2 -   7562323 I
e Okapia_johnstoni.LVCL01S0017931.1                         41334 0 +     78940 C
e Odocoileus_virginianus.KZ101650.1                       1083245 0 +   1425656 C
e Odobenus_rosmarus.KB229369.1                             684428 0 -   3126709 C
e Nyctereutes_procyonoides.CAJHUB010000786.1                37467 0 +   3668941 C
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Neophocaena_asiaeorientalis.KZ688543.1                  3954389 2 -   4490290 I
e Neomonachus_schauinslandi.NINY01007774.1                4489721 0 -  14209539 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             6589 379 -      8794 I
e Myotis_myotis.MyoMyo_scaffold_6123                        13515 236 +     66751 I
e Myotis_lucifugus.GL429887.1                             3468272 238 -   3747815 I
e Myotis_davidii.KB114863.1                               5022194 233 +   6462685 I
e Myotis_brandtii.KE161952.1                               970769 237 +   8389877 I
e Mustela_putorius.JH417978.1                             4427567 0 -  28371801 C
e Murina_feae.MurFea_scaffold_2254                          23900 236 -    100666 I
e Mungos_mungo.MunMun_flattened_line_8729                  149746 0 -    168139 C
e Moschus_moschiferus.MosMos_scaffold_78805                  5813 0 -     19904 C
e Mormoops_blainvillei.MorMeg_scaffold_2952                162937 259 +    265003 I
e Monodon_monoceros.MonMon_M_scaffold_5598                 149798 2 +    154973 I
e Mirounga_angustirostris.MirAng_flattened_line_8852        16322 0 -    104932 C
e Miniopterus_schreibersii.MinSch_scaffold_24116            36998 214 +     45743 I
e Miniopterus_natalensis.LDJU01000022.1                   8212509 213 +  10048721 I
e Micronycteris_hirsuta.MicHir_scaffold_37978               24387 274 -     32043 I
e Microgale_talazaci.MicTal_scaffold_34660                  40768 0 -     48017 C
e Mesoplodon_bidens.MesBid_scaffold_96348                    2003 2 -     12939 I
e Mellivora_capensis.MelCap_flattened_line_15433             5726 0 -     87323 C
e Megaderma_lyra.MegLyr_scaffold_3562                       65026 2 -    234502 I
e Manis_pentadactyla.KN017078.1                             39380 0 +     58827 C
e Manis_javanica.JSZB01003966.1                            149232 0 +    252755 C
e Lycaon_pictus.CM007556.1                               11094608 0 +  39895028 C
e Loxodonta_africana.GL010040.1                          20597894 0 -  62548349 C
e Lipotes_vexillifer.KE558548.1                            139369 2 +   3060487 I
e Leptonychotes_weddellii.KB714749.1                      3090826 0 -   3498232 C
e Lasiurus_borealis.LasBor_scaffold_59542                    5042 241 +     26176 I
e Kogia_breviceps.KogBre_flattened_line_35920               26998 2 +     37189 I
e Inia_geoffrensis.IniGeo_flattened_line_66725              12417 2 +     17520 I
e Hyaena_hyaena.HyaHya_flattened_line_20729                 22640 0 -     67322 C
e Hipposideros_galeritus.HipGal_scaffold_52959                377 2 +     26078 I
e Hipposideros_armiger.JXIK01001085.1                      282608 2 -    477199 I
e Hippopotamus_amphibius.HipAmp_scaffold_1308              150208 0 +    277961 C
e Heterohyrax_brucei.HetBruBak_scaffold_13814               68359 0 -    108006 C
e Hemitragus_hylocrius.HemHyl_scaffold_16669                32467 0 -     91191 C
e Helogale_parvula.HelPar_flattened_line_22962              22066 0 +     53719 C
e Giraffa_tippelskirchi.LVKQ01S012154.1                    185599 0 -    189561 C
e Felis_nigripes.FelNig_flattened_line_8080                 26394 0 +     52776 C
e Felis_catus_fca126.CM031420.1                         129285299 0 - 158578461 C
e Eubalaena_japonica.EubJap_flattened_line_7756             64881 0 +     89355 C
e Eschrichtius_robustus.EscRob_flattened_line_685          318424 0 +    330699 C
e Equus_przewalskii.ATBW01073585.1                          16166 0 +     92910 C
e Equus_caballus.CM000402.2                              13354676 0 +  41866177 C
e Equus_asinus.JREZ01000062.1                             5856176 0 -   7175178 C
e Enhydra_lutris.KZ291749.1                              85876835 0 +  99434291 C
e Elephantulus_edwardii.JH947210.1                        7830035 1277 +  15467074 I
e Elaphurus_davidianus.JRFZ01086400.1                     1495795 0 +   1727528 C
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Echinops_telfairi.JH980316.1                           22999931 2 -  44670279 I
e Diceros_bicornis.DicBicMic_scaffold_9545                   6452 0 +    151128 C
e Dicerorhinus_sumatrensis.PEKH010003161.1                 325812 0 +    993696 C
e Desmodus_rotundus.KZ672188.1                           18700517 262 -  18957592 I
e Delphinapterus_leucas.KZ290064.1                       80040207 0 -  96802777 C
e Dasypus_novemcinctus.JH568778.1                          185121 383 -   6883506 I
e Cryptoprocta_ferox.CryFer_flattened_line_19014            56919 0 -     70449 C
e Crocidura_indochinensis.CroInd_scaffold_27484              1226 0 -     22648 C
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1337 2 -      5782 I
e Condylura_cristata.JH655880.1                          60621791 0 +  78930452 C
e Choloepus_hoffmanni.KN194586.1                           763329 503 +    964067 I
e Choloepus_didactylus.ChoDid_scaffold_36182                18024 504 -     21363 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_160623         6920 0 -      9338 C
e Catagonus_wagneri.CatWag_scaffold_1305                   162277 0 -    276539 C
e Carollia_perspicillata.CarPer_scaffold_4436               61226 261 +     67245 I
e Capra_hircus.CM004562.1                               135711414 0 - 157403528 C
e Capra_aegagrus.CM003214.1                              21330197 0 + 157394656 C
e Canis_lupus_orion.HG994411.1                           16461937 0 -  44759192 C
e Canis_lupus_familiaris.chr31                           11095152 0 +  39895921 C
e Canis_lupus_dingo.QKWQ01001993.1                       11272441 0 -  35597290 C
e Canis_lupus_VD.CanFam_VD_scaffold_16982                   20732 0 +     87036 C
e CanFam4.chr31                                          11525758 0 +  39901454 C
e Camelus_ferus.KB016973.1                                2976160 0 +   6889770 C
e Camelus_dromedarius.KN271192.1                           400424 0 -  15254737 C
e Camelus_bactrianus.KN276303.1                           3222722 0 -   8989139 C
e Bubalus_bubalis.KI419065.1                               674242 0 +   1914593 C
e Bos_taurus.CM000177.6                                  22664479 0 + 158972876 C
e Bos_mutus.JH883513.1                                     418090 0 +    998990 C
e Bos_indicus.CM003021.1                                 22955825 0 + 161108492 C
e Bison_bison.KN264915.1                                   301727 0 -   6870073 C
e Beatragus_hunteri.BeaHun_scaffold_21644                   47579 0 -     72089 C
e Balaenoptera_bonaerensis.DF502048.1                        8754 0 -     13118 C
e Balaenoptera_acutorostrata.KI537095.1                  26383581 0 +  51448160 C
e Artibeus_jamaicensis.ArtJam_scaffold_41619                10440 261 -     29036 I
e Antilocapra_americana.AntAmePen_scaffold_27338             2548 0 +     55446 C
e Anoura_caudifer.AnoCau_scaffold_422                      392020 257 -    631301 I
e Ammotragus_lervia.NIVO01013474.1                        3525117 0 +   4113121 C
e Ailurus_fulgens.LNAC01000003.1                          7099380 0 -  16596857 C
e Ailuropoda_melanoleuca.LNAT01000321.1                  10662594 0 +  23371972 C
e Acinonyx_jubatus.LLWD01000356.1                         2038912 0 +   3721120 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           20901 0 -    119109 C
e Glis_glis.GliGli_scaffold_79770                           15993 0 -     18683 C
e Zapus_hudsonius.ZapHud_scaffold_64392                     20218 0 -     20485 C
e Jaculus_jaculus.JH725517.1                              8577088 0 +  11848649 C
e Hylobates_pileatus_a.tarseq_592                             35692 75 -     60944 I
e Allactaga_bullata.AllBul_scaffold_70162                   21404 0 -     22067 C
e Galeopterus_variegatus.GalVar_scaffold_354               159184 0 +    324696 C
e Microtus_ochrogaster.CM001673.1                        22823881 0 -  98408828 C
e Xerus_inauris.XerIna_scaffold_7898                       128400 2868 -    134049 I
e Varecia_variegata.k141_775891                             27530 0 -     33872 C
e Varecia_rubra.k141_432109                                  7995 0 -     20643 C
e Tupaia_tana.TupTan_flattened_line_68454                    9338 0 +     13056 C
e Tupaia_chinensis.KB320831.1                             2797404 0 -   3938065 C
e Trachypithecus_pileatus.k141_1022309                       5226 0 +     13828 C
e Trachypithecus_phayrei.ctg3                            44662914 0 -  44834318 C
e Trachypithecus_obscurus.k141_1115109                       8130 0 -     28054 C
e Trachypithecus_melamera.k141_699241                        2986 0 -     24393 C
e Trachypithecus_leucocephalus.k141_381681                   3005 0 +     12481 C
e Trachypithecus_laotum.k141_760702                          4719 0 +     14371 C
e Trachypithecus_hatinhensis.k141_504423                     6067 0 -     15592 C
e Trachypithecus_germaini.k141_868450                        3883 0 -     11566 C
e Trachypithecus_geei.k141_670367                           46082 0 -     54611 C
e Trachypithecus_francoisi.k141_768164                       4689 0 -     14244 C
e Trachypithecus_cristatus.k141_1011511                      5261 0 -     12939 C
e Trachypithecus_crepusculus.k141_1588528                   23360 0 -     32910 C
e Trachypithecus_auratus.k141_738098                        29800 0 +     38948 C
e Theropithecus_gelada.CM009951.1                       194011243 0 - 194193292 C
e Tarsius_wallacei.k141_48636                               60532 3805 +     65473 I
e Tarsius_lariang.k141_609102                               27216 3812 +     42269 I
e Spermophilus_dauricus.KZ294190.1                        2243603 0 +   2842873 C
e Sigmodon_hispidus.SigHis_scaffold_11332                  104689 0 -    120886 C
e Semnopithecus_vetulus.k141_1143185                        16479 0 +     30600 C
e Semnopithecus_schistaceus.k141_387461                     33457 0 +     42640 C
e Semnopithecus_priam.k141_410937                           40312 0 +     46263 C
e Semnopithecus_johnii.k141_785014                         121532 0 +    130994 C
e Semnopithecus_hypoleucos.k141_761524                      11528 0 +     20762 C
e Semnopithecus_entellus.k141_1572367                        6153 0 +     15331 C
e Sapajus_macrocephalus.k141_966464                         23859 0 -     62485 C
e Sapajus_apella.ctg10                                   17344538 0 -  30362882 C
e Saimiri_ustus.k141_1282476                                 7762 0 -     76454 C
e Saimiri_sciureus.k141_1947592                              7825 0 +     60816 C
e Saimiri_oerstedii.k141_841116                              7847 0 +     67014 C
e Saimiri_macrodon.k141_2087127                              7754 0 -     60842 C
e Saimiri_cassiquiarensis.k141_808270                        7812 0 +     34089 C
e Saimiri_boliviensis.NW_024100938.1                     15675899 0 -  43202129 C
e Rhinopithecus_strykeri.ctg4                            44859307 0 -  45163003 C
e Rhinopithecus_bieti.k119_554384                            2917 0 -     17045 C
e Rattus_norvegicus.chr11                                13917336 0 +  90463843 C
e Pygathrix_nigripes_a.k141_101123                             8537 0 +     18040 C
e Pygathrix_nigripes_b.ctg79                                 6809148 0 +   6970761 C
e Pygathrix_cinerea.k141_374971                             32651 0 +     56732 C
e Psammomys_obesus.NESX01026517.1                           37921 0 +     77221 C
e Propithecus_verreauxi.k141_158021                         42002 0 -     48185 C
e Propithecus_tattersalli.k141_907138                       19738 0 -     53241 C
e Propithecus_perrieri.k141_7554                            20103 0 +     27322 C
e Propithecus_edwardsi.k141_1317105                         38180 0 -     44753 C
e Propithecus_diadema.k141_577245                           45793 0 +     52369 C
e Propithecus_coronatus.k141_1353159                         6446 0 +     11805 C
e Propithecus_coquerelli.NW_012147863.1                     20390 0 -     30946 C
e Prolemur_simus.MPIZ01000048.1                           6851355 0 +  12164890 C
e Presbytis_mitrata.k141_860013                              8661 0 +     14865 C
e Presbytis_comata.k141_672698                               8546 0 -     15069 C
e Plecturocebus_moloch.k141_890597                          25863 0 -     75465 C
e Plecturocebus_miltoni.k141_841561                         15276 0 +    134592 C
e Plecturocebus_hoffmannsi.k141_985533                       3361 0 -    119457 C
e Plecturocebus_grovesi.k141_242819                         25553 0 +    152463 C
e Plecturocebus_dubius.k141_3565563                          6199 0 -     55515 C
e Plecturocebus_cupreus.k141_1145860                         2116 0 -     43940 C
e Plecturocebus_cinerascens.k141_744510                     25480 0 +    147771 C
e Plecturocebus_caligatus.k141_2539816                      15880 0 -     98129 C
e Plecturocebus_brunneus.k141_498086                        25641 0 +     67491 C
e Plecturocebus_bernhardi.k141_959214                       25428 0 +     44506 C
e Pithecia_vanzolinii.k141_831006                           15424 0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514 0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521 0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292 0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093 0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038 0 +     78826 C
e Pithecia_albicans.k141_991845                             45662 0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000036.1               26743271 0 +  26888534 C
e Piliocolobus_kirkii.k141_929665                            4788 0 +      7694 C
e Piliocolobus_gordonorum.k141_1270531                       5421 0 -     17985 C
e Piliocolobus_badius.k141_1987485                           4802 0 -      5908 C
e Peromyscus_maniculatus.KI615518.1                       4955125 0 -   8017169 C
e Perodicticus_potto.k141_1136815                           10207 0 +     61070 C
e Perodicticus_ibeanus.k141_117958                           9080 0 -     23713 C
e Papio_ursinus.k141_1345919                                 5471 0 -      7628 C
e Papio_papio.k141_979496                                    9606 0 +     14967 C
e Papio_kindae.k141_5458022                                 71074 0 -    104429 C
e Papio_hamadryas.Contig15                               47517083 0 +  47705337 C
e Papio_cynocephalus.k141_45376                              2801 0 +     25005 C
e Papio_anubis.CM001492.2                               188159711 0 - 188283584 C
e Otolemur_garnettii.GL873528.1                          18011493 0 -  38779656 C
e Otolemur_crassicaudatus.k141_505435                        3512 0 -     53940 C
e Onychomys_torridus.OnyTor_scaffold_12578                  42756 0 +     62360 C
e Ondatra_zibethicus.OndZib_scaffold_6821                  130071 0 +    145789 C
e Octodon_degus.JH651621.1                                3687420 1881 +  10294119 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65678347 0 +  89412551 C
e Nycticebus_coucang.k141_771591                            13545 0 +     16181 C
e Nycticebus_bengalensis.LG16                            65570136 0 -  95554990 C
e Nasalis_larvatus.k141_153429                              11264 0 +     48152 C
e Nannospalax_galili.KL201303.1                            119867 0 +    362372 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     91920 1922 -    117718 I
e Muscardinus_avellanarius.MusAve_scaffold_9643             14525 0 +     98495 C
e Mus_spretus.CM004110.1                                 74336277 0 +  97876770 C
e Mus_pahari.LT608305.1                                  67559927 0 +  89017189 C
e Mus_musculus.chr16                                     75493550 0 +  98207768 C
e Mus_caroli.LT608236.1                                  70771497 0 +  92629107 C
e Mirza_zaza.k141_593947                                     4089 0 -     12809 C
e Miopithecus_ogouensis.k141_2935907                         5468 0 +     29742 C
e Microcebus_murinus.CM007691.1                          16513035 0 +  47401472 C
e Mesocricetus_auratus.KB708139.1                         1051192 0 -  26018355 C
e Meriones_unguiculatus.MerUng_scaffold_52233               15570 0 +     15977 C
e Marmota_marmota.CZRN01000005.1                         36877588 0 +  64221397 C
e Mandrillus_sphinx.Contig144                             4453726 0 -   4543643 C
e Mandrillus_leucophaeus.scaffold125                     43440914 0 -  43563597 C
e Macaca_tonkeana.k141_2870633                               7882 0 -     27140 C
e Macaca_thibetana.k99_662710                               20515 0 -     24607 C
e Macaca_silenus.Contig12                                43844347 0 +  43892939 C
e Macaca_siberu.k141_741907                                 19228 0 -     55006 C
e Macaca_radiata.k141_3680256                                5551 0 -     13212 C
e Macaca_nigra.k141_282495                                   7885 0 -     46448 C
e Macaca_nemestrina.KQ004885.1                           11449199 0 +  11645122 C
e Macaca_mulatta.NC_041755.1                            196039033 0 + 196197964 C
e Macaca_maura.k141_251854                                  48931 0 -     79256 C
e Macaca_leonina.k141_467472                                 5706 0 -      7381 C
e Macaca_fuscata.k119_938422                                 2516 0 -     26361 C
e Macaca_fascicularis.k141_155037                           50406 0 +     63263 C
e Macaca_cyclopis.k119_883699                                2535 0 -     26467 C
e Macaca_assamensis.Contig65                             12709961 0 +  12821369 C
e Macaca_arctoides.k141_2201161                             23500 0 +     74745 C
e Loris_tardigradus.ctg97                                 3781302 0 +   6799190 C
e Loris_lydekkerianus.k141_550999                           13563 0 +     84689 C
e Lophocebus_aterrimus.ctg55                             19251749 0 +  19376315 C
e Lepilemur_septentrionalis.k141_710646                      1084 0 -     13103 C
e Lepilemur_ruficaudatus.k141_574529                        35037 0 -     38897 C
e Lepilemur_dorsalis.k141_134267                            56656 0 +     63517 C
e Lepilemur_ankaranensis.k141_884009                        27292 0 +     39228 C
e Lemur_catta.scaffold_1                                258409979 0 - 285822530 C
e Lagothrix_lagothricha.k141_12968                          53339 0 -    147782 C
e Indri_indri.k141_2197838                                    116 0 +      3484 C
e Ictidomys_tridecemlineatus.JH393315.1                   7129728 0 +  13083262 C
e Hystrix_cristata.HysCri_scaffold_50788                     7688 1865 +     22540 I
e Heterocephalus_glaber.JH602058.1                        2560252 0 +  31725842 C
e Hapalemur_occidentalis.k141_797938                        48308 0 -     54384 C
e Hapalemur_meridionalis.k141_186231                        31681 0 -     42470 C
e Hapalemur_griseus.k141_1387522                             8432 0 +     56096 C
e Hapalemur_gilberti.k141_279011                             3105 0 -     11661 C
e Hapalemur_alaotrensis.k141_1280836                         4627 0 +     10286 C
e Graphiurus_murinus.GraMur_scaffold_4493                   79386 0 +    118900 C
e Galagoides_demidoff.k141_1769638                          13144 0 +     27357 C
e Galago_senegalensis.k141_964197                           16038 0 -     43889 C
e Galago_moholi.ctg555                                     213680 0 -    847004 C
e Fukomys_damarensis.KN123630.1                          13895732 0 -  19261668 C
e Eulemur_sanfordi.k141_186399                              18623 0 -     29447 C
e Eulemur_rufus.k141_1620292                                35891 0 +     46535 C
e Eulemur_rubriventer.k141_411740                           21157 0 +     26808 C
e Eulemur_mongoz.k141_825972                                18693 0 +     27497 C
e Eulemur_macaco.k141_747087                                 2027 0 -     19505 C
e Eulemur_fulvus.k141_653297                                14043 0 +    109717 C
e Eulemur_flavifrons.k141_903901                            10560 0 +     60246 C
e Eulemur_coronatus.k141_3240342                            14235 0 +     36558 C
e Eulemur_collaris.k141_1015201                              1102 0 -      4292 C
e Eulemur_albifrons.k141_715837                              7832 0 +     13586 C
e Erythrocebus_patas.Contig8                             48780129 0 -  48907691 C
e Ellobius_talpinus.LOJH01198462.1                           1213 0 -      1901 C
e Ellobius_lutescens.LOEQ01003611.1                        243471 0 -    369425 C
e Dolichotis_patagonum.DolPat_scaffold_14102                39604 0 -     73477 C
e Daubentonia_madagascariensis.ctg11                     16847687 0 +  31942871 C
e Dasyprocta_punctata.DasPun_flattened_line_634             61584 0 -    236241 C
e Cuniculus_paca.CunPac_flattened_line_16637                20446 0 +     26546 C
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 32592 1717 -     67205 I
e Ctenodactylus_gundi.CteGun_scaffold_447                  213664 0 -    956709 C
e Cricetulus_griseus.LT883672.1                          53034667 0 +  72327488 C
e Cricetomys_gambianus.CriGam_scaffold_949                 282297 0 -    399297 C
e Colobus_polykomos.k141_1406057                            19335 0 +     23629 C
e Colobus_guereza.LG08                                  147667351 0 + 156195979 C
e Colobus_angolensis.KN985967.1                          10889423 0 +  10971483 C
e Chlorocebus_sabaeus.CM001963.2                        101148118 0 + 101219884 C
e Chlorocebus_pygerythrus.k141_1486215                      37559 0 -     53260 C
e Chlorocebus_aethiops.ctg22                             15143095 0 -  15256731 C
e Chiropotes_sagulatus.k141_773804                          18481 0 +     40510 C
e Chiropotes_israelita.k141_1189915                         74300 0 +    196370 C
e Chinchilla_lanigera.JH721867.1                         15963245 964 +  43084221 I
e Cheracebus_torquatus.k141_315545                          49494 0 +     54541 C
e Cheracebus_regulus.k141_2128895                           44815 0 +     57117 C
e Cheracebus_lugens.k141_996499                               516 0 +    188999 C
e Cheracebus_lucifer.k141_619653                             8777 0 -     18223 C
e Cheirogaleus_medius.k141_133808                           10871 0 +     13308 C
e Cheirogaleus_major.k141_1157592                           61827 0 -     68416 C
e Cercopithecus_roloway.k141_2263608                        24845 84 +     37128 I
e Cercopithecus_pogonias.k141_3109732                        5347 0 -     17744 C
e Cercopithecus_petaurista.k141_64532                        5368 0 -     25661 C
e Cercopithecus_nictitans.k141_1129315                       5595 0 +     35577 C
e Cercopithecus_neglectus.k141_2078027                      44593 0 -     45581 C
e Cercopithecus_mona.ctg12                               46481039 0 +  46592721 C
e Cercopithecus_albogularis.ctg51                              11994281 0 +  12117833 C
e Cercopithecus_lowei.k141_623764                           27750 0 +     35983 C
e Cercopithecus_hamlyni.k141_129805                          5583 0 +     16677 C
e Cercopithecus_diana.k141_2561715                           2678 84 +     15177 I
e Cercopithecus_cephus.k141_3893260                          2699 0 +     45019 C
e Cercopithecus_ascanius.k141_4123525                        5535 0 -     17608 C
e Cercocebus_torquatus.k141_3969582                         62652 0 -    107033 C
e Cercocebus_lunulatus.k141_4634644                          5342 0 -     21101 C
e Cercocebus_chrysogaster.k141_2328246                      30138 0 +     60454 C
e Cercocebus_atys.KQ010443.1                              6558661 0 +   6739814 C
e Cephalopachus_bancanus.k141_702587                         8788 3391 +     21754 I
e Cebus_unicolor.k141_239009                                15739 0 +     25043 C
e Cebus_olivaceus.k141_93739                                11496 0 -     26817 C
e Cebus_albifrons.Contig22                               18893952 0 -  29618158 C
e Cavia_tschudii.CavTsc_scaffold_488                       177725 1742 +    436027 I
e Cavia_porcellus.DS562889.1                             15799553 1742 -  24440124 I
e Cavia_aperea.AVPZ01000278.1                            15787615 1741 -  24422027 I
e Carlito_syrichta.NW_007248099.1                          309764 3411 +    345090 I
e Cacajao_melanocephalus.k141_1160263                       10730 0 -    134917 C
e Cacajao_hosomi.k141_303789                                18187 0 -    216513 C
e Cacajao_calvus.k141_96166                                 16140 0 +    125063 C
e Cacajao_ayresi.k141_724503                               117120 0 -    171031 C
e Avahi_peyrierasi.k141_798820                               3156 0 +      6337 C
e Avahi_laniger.k141_2840928                                 9540 0 -     16375 C
e Ateles_paniscus.k141_1631200                               9216 0 -     25888 C
e Ateles_marginatus.k141_899112                             67247 0 +    119057 C
e Ateles_geoffroyi_a.k141_1300742                             19253 0 -     58268 C
e Ateles_chamek.k141_1072810                                14752 0 +     89302 C
e Ateles_belzebuth.k141_1348307                             63739 0 +     85812 C
e Ateles_geoffroyi_b.tarseq_2582                             9542466 0 +  39197703 C
e Arctocebus_calabarensis.k141_587554                        4710 0 +      9265 C
e Aotus_vociferans.k141_718647                               9180 0 +     23246 C
e Aotus_trivirgatus.k141_1740727                             9173 0 -    104377 C
e Aotus_nancymaae.KZ196176.1                              5752575 0 +   9889416 C
e Aotus_griseimembra.k141_3275623                            8617 0 +     22701 C
e Aotus_azarae.k141_3170768                                 65671 0 +     78111 C
e Alouatta_seniculus.k141_790278                             3765 0 -      9835 C
e Alouatta_puruensis.k141_398195                            44846 0 +     45367 C
e Alouatta_palliata.k141_2378775                              705 0 +      5328 C
e Alouatta_nigerrima.k141_2187093                           28656 0 -     30219 C
e Alouatta_macconnelli.k141_2318944                          2074 0 -     24210 C
e Alouatta_juara.k141_2534995                                3752 0 +      4011 C
e Alouatta_discolor.k141_2476351                             1998 0 +     41985 C
e Alouatta_caraya.k141_664908                                2275 0 -     12443 C
e Alouatta_belzebul.k141_165776                             16723 0 +     19426 C
e Allochrocebus_solatus.k141_371672                          5331 0 -     80423 C
e Allochrocebus_preussi.k141_1108977                         4375 0 +     38766 C
e Allochrocebus_lhoesti.k141_3566948                         5437 0 -     29318 C
e Allenopithecus_nigroviridis.k141_2469532                   4720 0 -     60446 C
e Acomys_cahirinus.AcoCah_scaffold_1625                    117433 0 -    189883 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               16856 262 +    209709 gggg----g-g---g-cagtctt-gtgggcctgaaccctgaacttgtgggatctgatgctatctccagatagatagtctcaggattg---aattgaattgtaggacaccatttggtgtcctgagagttg-aaa--------aattgattggggtgagaataaatcCACAA---ATTTCAT---------------CTCAGAAGTTTGAGTAGAAATAACTCTGTTGGAAAACATTATCGTTAGATCAAAGGTGTTAATAGATCTGAGAGATCAAAATGGCAAAGAGTCATCTATGATTACAC
s Allenopithecus_nigroviridis.k141_2469532                   4720 261 -     60446 --cg----ggg---g-cagtctt-gtgggactgaaccctgaactcgtgggatctgatgctatctccagatagatagcctcaggattg---aattgaattgtaggacaccagttggtgtcctgagagttg-aag--------aattggttggggtgagactaaatctacaa---atttgat---------------ctcagaagtTTGAATAGAAACAATTCTGTtggaaaacattatcattagatcaaaggtgttcatagaactgagagaacaagatgacaaagagtcatctatgattatac
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         5437 261 -     29318 --cg----ggg---g-cagtctt-gtgggactgaaccctgaactcgtgggatctgatgctatctccagatagatagcctcaggattg---aattgaattgtaggacaccagttggtgtcctgagacctg-aag--------aattggttggggtgagactaaatctacaa---atttgat---------------ctcagaagtttgaatagaaacaattctgttggaaaacattatcattagatcaaaggtgttcatagaactgagagaacaagatgacaaagagtcatctatgattacac
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         4375 261 +     38766 --cg----ggg---g-cagtctt-gtgggactgaaccctgaactcgtgggatctgatgctatctccagatagatagcctcaggattg---aattgaattgtaggacaccagttggtgtcctgagagctg-aag--------aattggttggggtgagattaaatctacaa---atttgat---------------ctcagaagtTTGAATAGAAACAATTCTGTtggaaaacattatcattagatcaaaggtgttcatagaactgagagaacaagatgacaaagactcatctatgattatac
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          5331 261 -     80423 --cg----ggg---g-cagtctt-gtgggactgaaccctgaactcgtgggatctgatgctatctccagatagatagcctcaggattg---aactgaattgtaggacaccagttggtgtcctgagagttg-aag--------aattggttggggtgagactaaatctacaa---atttgat---------------ctcagaagtTTGAATAGAAATAATTCTGTTTgaaaacattatcattagatcaaaggtgttcacagaactgagagaacaagatgacaaagagtcatctatgattatac
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_165776                             16723 258 +     19426 --gg----gag---g-cattctt-gtgggactgaaccctgaacttgtgggatctgatgctatctccggatagatagtctcaggattg---aattgaattgtagaacaccagttggtgacctgagagttg-gag--------aattggttggggtgaaactaaatccacaa---atttgat---------------ctcagaagtttgagtagaaacaaTTCTGT-GGAAAACATTACCATTAGATCAGAGGTGTTCTTAGAATTGAGAGATCAAGATGACAAGG-GTCATCTATGATTATA-
i Alouatta_belzebul.k141_165776                         C 0 I 309
s Alouatta_caraya.k141_664908                                2275 259 -     12443 --gg----gag---g-cattctt-gtgggactgaatcctgaacttgtgggatctgatgctatctctggatagatagtctcaggattg---aactgaattgtagaacaccaattggtgacctgagagttg-gag--------aattggttggggtgaaactaaatccacaa---atttgat---------------ctcagaagtTTGCGTAGAAACAATTCTGT-GGAAAACATTACCATTAGTTCAGAGGTGTTCATAGAATCGAGAGATCAAGATGACAAGG-GTCATCTATGATTATAC
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2476351                             1998 258 +     41985 --gg----gag---g-cattctt-gtgggactgaaccctgaacttgtgggatctgatgctatctccggatagatagtctcaggattg---aattgaattgtagaacaccagttggtgacctgagagttg-gag--------aattggttggggtgaaactaaatccacaa---atttgat---------------ctcagaagtttgagtagaaacaaTTCTGT-GGAAAACATTACCATTAGATCAGAGGTGTTCATAGAATTGAGAGATCAAGATGACAAGG-GTCATCTATGATTATA-
i Alouatta_discolor.k141_2476351                        C 0 I 313
s Alouatta_juara.k141_2534995                                3752 259 +      4011 --gg----gag---g-cattctt-gtaggactgaatcctgaacttgtgggatctgatgccatctccggatagatagtctcaggattg---aactgaattgtagaacaccaattggtgacctgagagttg-gag--------aattggttggggtgaaactaaatccacaa---atttgat---------------ctcagaagtttgagtagaaacaaTTCTGT-GGAAAACATTACCATTAGATCAGAGGTGTTCATAGAATTGAGAGATCAAGATGACAAGG-GTCATCTATGATTATAC
i Alouatta_juara.k141_2534995                           C 0 N 0
s Alouatta_macconnelli.k141_2318944                          2074 259 -     24210 --gg----gag---g-cattctt-gtgggactgaatcctgaacttgtgggatctgatgctatctccggatagatagtctcaggattg---aactgaattgtagaacaccaattggtgacctgagagttg-gag--------aattggttggggtgaaactaaatccacaa---attagat---------------ctcagaagtttgtgTAGAAACAATTCTGT-GGAAAACATTACCATTAGTTCAGAGGTGTTCATAGAATTGAGAGATCAAGATGACAAGG-GTCATCTATGATTATAC
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           28656 259 -     30219 --gg----gag---g-cattctt-gtgggactgaatcctgaacttgtgggatctgatgctatctccggatagatagtctcaggattg---aattgaattgtagaacaccaattggtgacctgagagttg-gag--------aactggttggggtgaaactaaatccacaa---attttat---------------ctcagaagtttgagtagaaacaaTTCTGT-GGAAAACATTACCATTAGATCAGAGGTGTTCATAGAATTGAGAGATCAAGATGACAAGG-GTCATCTATGATTATAC
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_2378775                              705 259 +      5328 --gg----gag---g-cattctt-gtgggactgaatcctgaacttgggggatctgatgctatctccggatagatagtctcaggattg---aattgaattgtagaacactaattggtgacctgagagttg-gag--------aattggttggggtgaaactaaatccacaa---atttgat---------------ctcagaagtttgagtagaaacaaTTCTGT-GGAAAACATTACCATTAGATCAGAGGTGTTCATAGAATTGAGAGATCAAGATGACAAGG-GTCATCTATGATTATAC
i Alouatta_palliata.k141_2378775                        C 0 C 0
s Alouatta_puruensis.k141_398195                            44846 259 +     45367 --gg----gag---g-cattctt-gtgggactgaatcctgaacttgtgggatctgatgctatctccggatagatagtctcaggattg---aactgaattgtagaacagcaattggtgacctgagagttg-gag--------aattggttggggtgaaactaaatccacaa---atttgat---------------ctcagaagtttgagtagaaacaaTTCTGT-GGAAAACATTACCATTAGATCAGAGGTGTTCATAGAATTGAGAGATCAAGATGACAAGG-GTCATCTATGATTATAC
i Alouatta_puruensis.k141_398195                        C 0 C 0
s Alouatta_seniculus.k141_790278                             3765 259 -      9835 --gg----gag---g-cattctt-gtaggactgaatcctgaacttgtgggatctgatgccatctccggatagatagtctcaggattg---aactgaattgtagaacagcaattggtgacctgagagttg-gag--------aattggttggggtgaaactaaatccacaa---atttgat---------------ctcagaagtttgagtagaaacaaTTCTGT-GGAAAACATTACCATTAGATAAGAGGTGTTCATAGAATTGAGAGATCAAGATGACAAGG-GTCATCTATGATTATAC
i Alouatta_seniculus.k141_790278                        C 0 I 292
s Aotus_azarae.k141_3170768                                 65671 261 +     78111 --gg----gaa---g-cagtctt-gtgggactgaaccctgaacttgtgggatctgatgctatctccagatagatagtctcaggattg---aattgaattgtaggacaccaattgttgacctgagagttg-gag--------aattggttggggtgacactaaatccacaa---atctgat---------------ctcagaagagtgagtaaaaacaaTACTGTtgggaaacattaccattagatcagaggtgttcatagaattgagagatcaagatgacaaagagtcatctatgattacac
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            8617 261 +     22701 --gg----gag---g-cagtctt-gtgggactgaaccctgaacttgtgggatctgatgctatctccagatagatagtctcaggattg---aattgaattgtaggacaccaattggtgacctgagagttg-gag--------aattggttggggtgacactaaatccacaa---atttgat---------------ctcagaagagtGAGCAAAAACAATACTGTtggaaaacattaccattatatcagaggtgttcatagagttgagagatcaagatgacaaagagtcatctatgattacac
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5752575 261 +   9889416 --Gg----gag---g-cagtctt-gtgggactgaaccCTGAacttgtgggatctgatgctatctccagatAGATAGTCTCAGGattg---aattgaattgtaggaCACCAATTGTTGACCTGAGAGTTG-GAG--------AATTGGTTGGGGTGACACTAAATCCACAA---ATTTGAT---------------CTCAGAAGAGTGAGTAAAAACAATACTGTTGGGAAACATTACCATTAGATCAGAGGTGTTCATAGAGTTGAGAGATCAAGATGACAAAGAGTCATCTATGATTACAC
i Aotus_nancymaae.KZ196176.1                            C 0 I 3
s Aotus_trivirgatus.k141_1740727                             9173 261 -    104377 --gg----gag---g-cagtctt-gtgggactgaaccctgaacttgtgggatctgatgctatctccagatagatagtctcaggattg---aattgaattgtaagacaccaattggtgacctgagagttg-gag--------aattggttggggtgacactaaatccacaa---atttgat---------------ctcagaagagtgagtaaaaacaaTACTGTtgggaaacattaccattagatcagaggtgttcatagagttgagagatcaagatgacaaagagtcatctatgattatac
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               9180 261 +     23246 --gg----gag---g-cagtctt-gtgggactgaaccctgaacttgtgggatctgatgctatctccagatagatagtctcaggattg---aattgaattgtaagacaccaattggtgacctgagagttg-gag--------aattggttggggtgacactaaatccacaa---atttgat---------------ctcagaagagtgagtaaaaacaaTACTGTtgggaaacattaccattagatcagaggtgttcatagagttgagagatcaagatgacaaagagtcatctatgattatac
i Aotus_vociferans.k141_718647                          C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9542466 259 +  39197703 --ag----gag---g-cagtctt-gtgggactgaaccctgaacttgtggggtctgatgctatctccggatagatagtctcaggattg---aattgaattgtaggacaccaattggtgacctgagagttg-gag--------aattggttggggtgaaactaaatccacaa---atttgat---------------ctcagaagtttgagtagaaacaaTTCTgt-ggaaaacattaccattagatcagaggtgttcatagaattgagagatcaagatgacaagg-gtcatctatgattatac
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             63739 259 +     85812 --ag----gag---g-cagtctt-gtgggactgaaccctgaacttgtggggtctgatgctatctccggatagatagtctcaggattg---aattgaattgtaggacaccaattggtgacctgagagttg-gag--------aattggttggggtgaaactaaatccacaa---atttgat---------------ctcagaagtttgagtagaaacaaTTCTgt-ggaaaacattaccattagatcagaggtgttcatagaattgagagatcaagatgacaagg-gtcatctatgattatac
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                14752 259 +     89302 --ag----gag---g-cagtctt-gtgggactgaaccctgaacttgtggggtctgatgctatctccggatagatagtctcaggattg---aattgaattgtaggacaccaattggtgacctgagagttg-gag--------aattggttggggtgaaactaaatccacaa---atttgat---------------ctcagaagtttgagtagaaacaaTTCTgt-ggaaaacattaccattagatcagaggtgttcatagaattgagagatcaagatgacaagg-gtcatctatgattatac
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             19253 259 -     58268 --ag----gag---g-cagtctt-gtgggactgaaccctgaacttgtggggtctgatgctatctccggatagatagtctcaggattg---aattgaattgtaggacaccaattggtgacctgagagttg-gag--------aattggttggggtgaaactaaatccacaa---atttgat---------------ctcagaagtttgagtagaaacaaTTCTgt-ggaaaacattaccattagatcagaggtgttcatagaattgagagatcaagatgacaagg-gtcatctatgattatac
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             67247 259 +    119057 --ag----gag---g-cagtctt-gtgggactgaaccctgaacttgtggggtctgatgctatctccggatagatagtctcaggattg---aattgaattgtaagacaccaattggtgacctgagagttg-gag--------aattggttggggtgaaactaaatccacaa---atttgat---------------ctcagaagtttgagtagaaacaaTTCTgt-ggaaaacattaccattagatcagaggtgttcatagaattgagagatcaagatgacaagg-gtcatctatgattatac
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               9216 259 -     25888 --ag----gag---g-cagtctt-gtgggactgaaccctgaacttgtggggtctgatgctatctccggatagatagtctcaggattg---aattgaattgtaggacaccaattggtgacctgagagttg-gag--------aattggttggggtgaaactaaatccacaa---atttgat---------------ctcagaagtttgagtagaaacaaTTCTgt-ggaaaacattaccattagatcagaggtgttcatagaattgagagatcaagatgacaagg-gtcatctatgattatac
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Cacajao_ayresi.k141_724503                               117120 261 -    171031 --gg----gag---g-cagtctt-gtgggactgaaccctgaacttatgggatctgatgctatccctggatagatagtcttaggattg---aattgaattgtaggacaccagttggtgacccgagagttg-gag--------aattggttggggtgagactaaatccacaa---atttgat---------------ctcagaagtttgagtagaaacaaTTCTGTCggaaaacattaccattagatcagagatgttcacagaattgagagatcaaggtgacaaagagtcatctatgattacac
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 16140 261 +    125063 --gg----gag---g-cagtctt-gtgggactgaaccctgaacttatgggatctgatgctatccctggatagatagtcttaggattg---aattgaattgtaggacaccagttggtgacccgagagttg-gag--------aattggttggggtgagactaaatccacaa---atttgat---------------ctcagaagtctgagtagaaacaaTTCTGTCggaaaacattaccattagatcagagatgttcacagaattgagagatcaaggtgacaaagagtcatctatgattacac
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                18187 261 -    216513 --gg----gag---g-cagtctt-gtgggactgaaccctgaacttatgggatctgatgctatccctggatagatagtcttaggattg---aattgaattgtaggacaccagttggtgacccgagagttg-gag--------aattggttggggtgagactaaatccacaa---atttgat---------------ctcagaagtttgagtagaaacaaTTCTGTCggaaaacattaccattagatcagagatgttcacagaattgagagatcaaggtgacaaagagtcatctatgattacac
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       10730 261 -    134917 --gg----gag---g-cagtctt-gtgggactgaaccctgaacttatgggatctgatgctatccctggatagatagtcttaggattg---aattgaattgtaggacaccagttggtgacccgagagttg-gag--------aattggttggggtgagactaaatccacaa---atttgat---------------ctcagaagtttgagtagaaacaaTTCTGTCggaaaacattaccattagatcagagatgttcacagaattgagagatcaaggtgacaaagagtcatctatgattacac
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Cebus_albifrons.Contig22                               18893952 261 -  29618158 --gg----gag---g-cagtctt-gtgggactgaaccttgaacttgtggaatcggatgctatctccagatagatagtctcaggattt---aattgaattgtaggacaccaattggtgacccgagagttg-gag--------aattggttggggtgagactaaatccacaa---atttgat---------------ctcagaagATTGAGTAAAAACAATAATGTtggaaaacattaccattagatcggaggtattcatagaattgagagatcaagatgacaaagagtcatctatgattacaa
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                11496 261 -     26817 --gg----gag---g-cagtctt-gtgggactgaaccttgaacttgtggaatcggatgctatctccagatagatagtctcaggattg---aattgaattgtaggacaccaattggtgacccgagagttg-gag--------aattggttggggtgagactaaatccacaa---atttgat---------------ctcagaagATTGAGTAAAAACAATAATGTtggaaaacattaccattagatcggaggtattcatagaattgagagatcaagatgacaaagagtcctctatgattacaa
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                15739 261 +     25043 --gg----gag---g-cagtctt-gtgggactgaaccttgaacttgtggaatcggatgctatctccagatagatagtctcaggattg---aattgaattgtaggacaccaattggtgacccgagagttg-gag--------aattggttggggtgagactaaatccacaa---atttgat---------------ctcagaagATTGAGTAAAAACAATAATGTtggaaaacattaccattagatcggaggtattcatagaattgagagatcaagatgacaaagagtcatctatgattacaa
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cercocebus_atys.KQ010443.1                              6558661 261 +   6739814 --cg----ggg---g-cagtctt-gtgggactgaaccctgaactcgtgggatctaatgctatctccagatagatagcctcaggattg---aattgaactgtaggacaccAGTTGGTGTCCTGAGAATTG-AAG--------AATTGGTTGGGGTGAGACTAAATCCACAA---ATTTGAT---------------CTCAGAAGTTTGAATAGAAACAATTCTGTTGGAAAACATTATCATCAGATCAAAGGTGTTCATAGAACTGAGAGAACAAGATGACAAAGAGTCATCTATGATTATAC
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      30138 261 +     60454 --cg----ggg---g-cagtctt-gtgggactgaaccctgaactcgtgggatctgatgctgtctccagatagatagcctcaggattg---aattgaactgtaggacaccagttggtgtcctgagaattg-aag--------aattggttggggtgagactaaatccacaa---atttgat---------------ctcagaagtTTGAATAGAAACAATTCTGTtggaaaacattatcatcagatcaaaggtgttcatagaactgagagaacaagatgacaaagagtcatctatgattatac
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          5342 261 -     21101 --cg----ggg---g-cagtctt-gtgggactgaaccctgaactcgtgggatctaatgctatctccagatagatagcctcaggattg---aattgaactgtaggacaccagttggtgtcctgagaattg-aag--------aattggttggggtgagactaaatccacaa---atttgat---------------ctcagaagtttgaatagaaacaattctgttggaaaacattatcatcagatcaaaggtgttcatagaactgagagaacaagatgacaaagagtcatctatgattatac
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         62652 261 -    107033 --cg----ggg---g-cagtctt-gtgggactgaaccctgaactcgtgggatctaatgctatctccagatagatagcctcaggattg---aattgaactgtaggacaccagttggtgtcctgagaattg-aag--------aattggttggggtgagactaaatccacaa---atttgat---------------ctcagaagtTTGAATAGAAACAATTCTGTtggaaaacattatcatcagatcaaaggtgttcatagaactgagagaacaagatgacaaagagtcatctatgattatac
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        5535 240 -     17608 --cg----ggg---g-cagtctt-g---------------------tgggatctaatgctatctccagatagatagcctcagggttg---aattgaatggtaggacaccagttggcgtcctgagagttg-aag--------aattggttggggtgagactaaatctacaa---atttgat---------------ctcagaagtttgaatagaaacaattctgttggaaaacattaccattagatcaaaggtgttcatagaactgagagaacaagatgacaaagagtcatctatgattatac
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          2699 240 +     45019 --cg----ggg---g-cagtctt-g---------------------tgggatctaatgctatctccagatagatagcctcagggttg---aattgaatggtaggacaccagttggcatcctgagagctg-aag--------aattggttggcgtgagactaaatctacaa---atttgat---------------ctcagaagtTTGAATAGAAACAATTCTGTtggaaaacattatcattagatcaaaggtgttcatagaactgagagaacaagatgacaaagagtcatctatgattatac
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           2762 243 +     15177 --cg----ggg---g-cagtc-------------------aactcgtgggatctgatgctatctccagatagatagcctcaggattg---aattgaattataggacaccagttggtgtcctgagagctg-aag--------aactggttggggtgagactaaatctacaa---atttgat---------------ctcagaagtttgaatagaaacaattctgttggaaaacattatcattagatcaaaggtgttcatagaactgagagaacaagataacaaagagtcatctatgattatac
i Cercopithecus_diana.k141_2561715                      I 84 C 0
s Cercopithecus_hamlyni.k141_129805                          5583 240 +     16677 --cg----ggg---g-cagtctt-g---------------------tgggatctaatgctatctccagatacatagcctcaggactg---aattgaattgcaggacaccagttggtgtcctgagagctg-aag--------aattggttggggtgagactaaatctacaa---atttgat---------------ctcagaagtttgaatagaaacaattctgttggaaaacattatcattagatcaaaggtgttcatagaactgacagaacaagatgacaaagagtcatctctgattatac
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           27750 261 +     35983 --cg----ggg---g-cagtctt-gtgggactgaaccctgaactcgtgggatctgatgctatctccagatagatagcctcaggattg---aattgaattgtaggacaccagttggcgtcctgagagttg-aag--------aattggttggggtgagactaaatctacaa---atttgat---------------ctcagaagtttgaatagaaacaattctgttggaaaacattatcattagatcaaaggtgttcatagaactgagagaacaagatgacaaagagtcatctatgattatac
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11994281 261 +  12117833 --tg----ggg---g-cagtctt-gtgggactgaaccctgaactcgtgggatctaatgctatctccagatagatagcctcaggattg---aattgaattgtaggacaccagttggcgtcctgagagttg-aag--------aattggttggggtgagactaaatctacaa---atttgat---------------ctcagaagtTTGAATAGAAACAATTCTGTtggaaaacattatcattagatcaaaggtgttcatagaactgagagaacaagatgacaaagagtcatctatgattatac
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46481039 264 +  46592721 --cg----ggg---g-cagtctt-gtgggactgaaccctgaacttgtgggatctaatgctatctccagatagatagcctcaggattg---aattgaattgtaggacaccagttggcgtcctgagagttg-aag--------aattggttggggtgagactaaatctacaacaaatttgat---------------ctcagaagtTTGAATAGAAACAATTCTGTtggaaaacattatcattagatcaaaggtgttcatagaactgagagaacaagatgacaaagagtcatctatgattatac
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      44593 261 -     45581 --cg----ggg---g-cagtctt-gtgggactgaaccctgaactcgtgggatctgacgctatctccagatagatagcctcaggattg---aattgaattgtaggacaccagctggcatcctgagagttg-aag--------aattggttggggtgagactaaatctacaa---atttgat---------------ctcagaagtttgaatagaaacaattctgttggaaaacattatcattagatcaaaggtgttcatagaactgagagaacaagatgacaaagagtcatctatgattatac
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       5595 240 +     35577 --cg----ggg---g-cagtctt-g---------------------tgggatctaatgctatctccagatagatagcctcaggattg---aattgaattgtaggacaccagttggcgtcctgagagttg-aag--------aattggttggggtgagactaaatctacaa---atttgat---------------ctcagaagtTTGAATAGAAACAATTCTGTtggaaaacattatcattagatcaaaggtgttcatagaactgagagaacaagatgacaaagagtcatctatgattatac
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        5368 261 -     25661 --cg----ggg---g-cagtctt-gtgggactgaaccctgaactcgtgggatctgatgctatctccagatagatagcctcaggattg---aattgaattgtaggacaccagttggcgtcctgagagttg-aag--------aattggttggggtgagactaaatctacaa---atttgat---------------ctcagaagtttgaatagaaacaattctgttggaaaacattatcattagatcaaaggtgttcatagaactgagagaacaagatgacaaagagtcatctatgattatac
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        5347 240 -     17744 --cg----ggg---g-cagtctt-gtggg---------------------atctgatgctatctccagatagatagcctcaggattg---aattgaattgtaggacaccagttggcgtcctgagagtta-aag--------aattggttggggtgagactaaatctacaa---atttgat---------------ctcagaagtttgaatagaaacaattctgttggaaaacattatcattagatcaaaggtgttcatagaactgagagaacaagatgacaaagagtcatctatgattatac
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        24929 243 +     37128 --cg----ggg---g-cagtc-------------------aactcgtgggatctgatgctatctccagatagatagcctcaggattg---aattgaattataggacaccagttggtgtcctgagagctg-aag--------aactggttggggtgagactaaatctacaa---atttgat---------------ctcagaagtttgaatagaaacaattctgttggaaaacattatcattagatcaaaggtgttcatagaactgagagaacaagatgacaaagagtcatctatgattatac
i Cercopithecus_roloway.k141_2263608                    I 84 C 0
s Cheracebus_lucifer.k141_619653                             8777 261 -     18223 --gg----gag---g-cagtctt-gtgggactgaactctgaacttgtgggatctcatgctatctcgggatagacagtcttaggattg---aattggattgtaagacaccaattggtgacctgagagttg-gag--------aattggttggggtgagactaaaaccacaa---atttgat---------------ctcagaagtctgagtaaaaacaattatgttGGTAAACATTACCATGAGATCAGAGGTGTTCAAAGAATTAAGAGATCAAGATGACAAAGAGTTGTCTATGATTACAC
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                               516 261 +    188999 --gg----gag---g-cagtctt-gtgggactgaactctgaacttgtgggatctcatgctatctctggatagacagtcttaggattg---aattggattgtaagacaccaattggtgacctgagagttg-gag--------aattggttggggtgagactaaaaccacaa---atttgat---------------ctcagaagtctgagtaaaaacaattatgttGGTAAACATTACCAAGAGATCAGAGGTGTTCAAAGAATTAAGAGATCAAGATGACAAAGAGTTGTCTATGATTACAC
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           44815 261 +     57117 --gg----gag---g-cagtctt-gtgggactgaactctgaacttgtgggatctcatgctatctctggatagacagtcttaggattg---aattggattgtaagacaccaattggtgacctgagagttg-gag--------aattggttggggtgagactaaaaccacaa---atttgat---------------ctcagaagtctgagtaaaaacaattatgttGGTAAACATTACCATGAGATCAGAGGTGTTCAAAGAATTAAGAGATCAAGATGACAAAGAGTTGTCTATGATTACAC
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          49494 261 +     54541 --gg----gag---g-cagtctt-gtgggactgaactctgaacttgtgggatctcatgctatctctggatagacagtcttaggattg---aattggattgtaagacaccaattggtgacctgagagttg-gag--------aattggttggggtgagactaaaaccacaa---atttgat---------------ctcagaagtctgagtaaaaacaattatgttGGTAAACATTACCATGAGATCAGAGGTGTTCAAAGAATTAAGAGATCAAGATGACAAAGAGTTGTCTATGATTACAC
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chiropotes_israelita.k141_1189915                         74300 260 +    196370 --gg----gag---g-cagtctt-gtgggactgaaccctgaacttgtgggatctgatgctatccctggatagatagtcttaggatta---aattgaatagtaggacaccaattggtgacccgagagttg-gag--------aa-tggttgggatgagactaaatccataa---atttgat---------------ctcagaagtttgagtagaaacaaTTCTGTtggaaaacattaccattagatcagaggtgttcacagaattgagagatcaagatgacaaagagtcatctatgattacac
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          18481 260 +     40510 --gg----gag---g-cagtctt-gtgggactgaaccctgaacttgtgggatctgatgctatccctggatagatagtcttaggatta---aactgaattgtaggacaccaattggtgacccgagagttg-gag--------aa-tggttgggatgagactaaatccataa---atttgat---------------ctcagaagtttgagtagaaacaaTTCTGTtggaaaacattaccattagatcagaggtgttcacagaattgagagatcaagatgacaaagagtcatctatgattacac
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15143095 261 -  15256731 --cg----ggg---g-cagtctt-gtgggactgaaccccgaactcgtgggatctaatgctatctccagatagatagcctcaggattg---aattgaattgtaggacaccagttggtgtcctgagagctg-aag--------aattggttggggtgagactaaatctacaa---atttgat---------------ctcagaagtTTGAACAGAAACAATTCTGTTTgaaaacattatcattagatcaaaggtgttcatagaactgagagaacaagatgacaaagagtcatctatgattatac
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      37559 261 -     53260 --cg----ggg---g-cagtctt-gtgggactgaaccccgaactcgtgggatctaatgctatctccagatagacagcctcaggattg---aattgaattgtaggacaccagttggtgtcctgagagctg-aag--------aattggttggggtgagactaaatctacaa---atttgat---------------ctcagaagtttgaatagaaacaattctgtttgaaaacattatcattagatcaaaggtgttcatagaactgagagaacaagatgacaaagagtcatctatgattatac
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101148118 261 + 101219884 --cg----ggg---g-cagtctt-gtgggactgaaccCTGAACTCGTGGGATCTAATGCTATCTCCAGATAGATAGCCTCAggattg---aattgaattgtaggaCACCAGTTGGTGTCCTGAGAGCTG-AAG--------AATTGGTTGGGGTGAGACTAAATCTAAAA---ATTTGAT---------------CTCAGAAGTTTGAATAGAAACAATTCTGTTTGAAAACATTATCATTAGATCAAAGGTATTCATAGAACTGAGAGAACAAGATGACAAAGAGTCATCTATGATTATAC
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Erythrocebus_patas.Contig8                             48780129 261 -  48907691 --cg----ggg---g-cagtctt-gtgggactgaaccctgaactcatgggatctaatgctatctccagatagatagcctcaggattg---aattgaattgtaggacaccagttggtgtcctgagagttg-aag--------aattggttggggtgagactaaatctacaa---atttgat---------------ctcagaagtttgaatagaaacaattctgtttgaaaacattatcattagatcaaaggtgttcatagaactgagagaacaagatgacaaagagtcatctatgattatac
i Erythrocebus_patas.Contig8                            C 0 C 0
s Gorilla_beringei.k141_111300                               8578 255 -     14630 ----------------cagtctt-gtgggtctgaaccctgaacttgtgggatctgatgctatctccagatagatagtctcaggattg---aattgaattgtaggacaccagttggtgtcctgagagttg-aag--------aattggttggggtgagactaaatccacaa---atttgat---------------ctcagaagtttgagtagaaacaattctgttggaaaacattatcattagatcaaaggtgttcatagaactgagagatcaagatgaaaaagagtcatctatgattacac
i Gorilla_beringei.k141_111300                          I 8 C 0
s Gorilla_gorilla.LT578340.1                            119655678 255 - 195582420 ----------------cagtctt-gtgggtctgaaccctgaacttgtgggatctgatgctatctccagatagacagtctcaggattg---aattgaattgtaggacaccagttggtgtcctgagagttg-aag--------aattggttggggtgagactaaatccacaa---atttgat---------------ctcagaagtttgagtagaaacaaTTCTGTtggaaaacattatcattagatcaaaggtgttcgtagaactgagagatcaagatgaaaaagagtcatctatgattacac
i Gorilla_gorilla.LT578340.1                            I 8 C 0
s Hoolock_leuconedys.ctg903                                    12559 264 -     61166 gggg----ggg---ggcagtctt-gtgggcctgaaccctgaacttgtgggatctgatgctatctccagatagacagtctcaggattg---aattgaattgtaggacaccagttggtgtcctgagagttg-aag--------aattgattggggtgagactaaatccacaa---atttgat---------------ctcagaagtttgagtagaAGCAATTCTATtggaaaacattgtcattagatcaaaggtgttcatagaaccgagagatcaagatgacaaagagtcatctgtgatgacac
i Hoolock_leuconedys.ctg903                                C 0 I 338
s Hylobates_abbotti.k141_1816750                             1028 263 +      3202 gagg----ggg---g-cagtctt-gtgggcctgaaccctgaacttgtgggatctgatgctatctccagatagacagtcccaggattg---aattgaattgtaggacaccagttggtgtcctgagagttg-aag--------aattgattggggtgagactaaatccacaa---atttgat---------------ctcagaagtttgagtagaAGCAATTCTATtggaaaacattgtcattagatcaaaggtgttcatagaaccaagagatcaagatgacaaagagtcatctgtgatgacac
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1633646                               998 263 -      2102 gagg----ggg---g-tagtctt-gtgggcctgaaccctgaacttatgggatctgatgctatctccagatagacagtctcaggattg---aattgaattgtaggacaccagttggtgtcctgagagttg-aag--------aattgattggggtgagactaaatccacaa---atttgat---------------ctcagaagtttgagtagaAGCAATTCTATtggaaaacattgtcattagatcaaaggtgttcatagaaccgagagagcaagatgacaaagagtcatctgtgatgacac
i Hylobates_agilis.k141_1633646                         C 0 C 0
s Hylobates_klossii.k141_468230                              2514 263 +      5464 gagg----ggg---g-cagtctt-gtgggcctgaaccctgaacttgtgggatctgatgctatctccagatagacagtctcaggattg---aattgaattgtaggacaccagttggtgtcctgagagttg-aag--------aattgattggggtgagactaaatccacaa---atttgat---------------ctcagaagtttgagtagaAGCAATTCTATtggaaaacattgtcattagatcaaaggtgttcatagaaccgagagagcaagatgacaaagagtcatctgtgatgacac
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14627863 263 -  25970782 gagg----ggg---g-cagtctt-gtgggcctgaaccctgaacttgtgggatctgatgctatctccagatagacagtctcaggattg---aattgaattgtaggacaccagttggtgtcctgagagttg-aag--------aattgattggggtgagactaaatccacaa---atttgat--------------c-tcagaagtttgagtagaAGCAATTCTATtggaaaacattgtcattagatcaaaggtgttcatagaaccgagagatcaagatgacaaagagtcatctgtgatgacac
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                             414 263 +      4161 gagg----ggg---g-tagtctt-gtgggcctgaaccctgaacttgtgggatctgatgctatctccagatagacagtcccaggattg---aattgaattgtaggacaccagttggtgtcctgagagttg-aag--------aattgattggggtgagactaaatccacaa---atttgat---------------ctcagaagtttgagtagaAGCAATTCTATtggaaaacattgtcattagatcaaaggtgttcatagaaccgagagatcaagatgacaaagagtcatctgtgatgacac
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             35767   6 -     60944 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------tttttt--------------------------------------------------------------------------------------------------------------------------
i Hylobates_pileatus_a.tarseq_592                         I 75 I 13
s Lagothrix_lagothricha.k141_12968                          53339 255 -    147782 --gg----gaa---g-cagtatt-gtgggactgaaccctgaacttgtgggatctgatgctatctccggata----gtctcaggattg---aattgaattgtaggacaccaattggtgacctgagagttg-gag--------aattggttggggtgaaactaaatccacaa---atttgat---------------ctgagaagtttgagtagaaacaaTTCggt-ggaaaacattaccattagatcagaggtgttcatagaattgagagatcaagatgacatgg-gtcatctatgattatac
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lophocebus_aterrimus.ctg55                             19251749 261 +  19376315 --cg----ggg---g-cagtctt-gtgggactgaaccctgaactcgtgggatctgatgctatctccagatagatagcctcaggattg---aattgaactgtaggacaccagttggtgtcctgagaattg-aag--------aattggttggggtgagactaaatccacaa---atttgat---------------ctcagaagtTTGAATAGAAACAATTCTGTtggaaaacattatcatcagatcaaaggtgttcacagaactgagagaacaagatgacaaagagtcatctatgattatac
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Macaca_arctoides.k141_2201161                             23500 261 +     74745 --tg----ggg---g-cagtctt-gtgggactgaaccctgaactcatgggatctgatgctatctccagatagatagcctcaggattg---aattgaactgtaggacaccagttggtgtcctgagaattg-aag--------aattggttggggtgagactaaatccacaa---atttgat---------------ctcagaagtTTGAATAGAAACAATTCTGTCggaaaacattatcattagatcaaaggtgttcatagaactgagagaacaagatgacaaagagtcatctatgattatac
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12709961 261 +  12821369 --tg----ggg---g-cagtctt-gtgggactgaaccctgaactcatgggatctgatgctatctccagatagatagcctcaggattg---aattgaactgtaggacagcagttggtatcctgagagttg-aag--------aattggttggggtgagactaaatccacaa---atttgat---------------ctcagaagtTTGAATAGAAACAATTCTGTCggaaaacattatcattagatcaaaggtgttcatagaactgagagaacaagatgacaaagagtcatctatgattatac
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                2535 261 -     26467 --cg----ggg---g-cagtctt-gtgggactgaaccctgaactcatgggatctgatgctatctccagatagatagcctcaggattg---aattgaactgtaggacaccagttggtgtcctgagaattg-aag--------aattggttggggtgagactaaatccacaa---atttgat---------------ctcagaagtttgaatagaaacaattctgttggaaaacattatcattagatcaaaggtgttcatagaactgagagaacaagatgacaaagagtcatctatgattatac
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           50406 261 +     63263 --cg----ggg---g-cagtcct-gcgggactgaaccctgaactcatgggatctgatgctatctccagatagatagcctcaggattg---aattgaactgtaggacaccagttggtgtcctgagaattg-aag--------aattggttggggtgagactaaatctacaa---atttgat---------------ctcaggagtTTGAATAGAAACAATTCTGTtggaaaacattatcattagatcaaaggtgttcatagaactgagagaacaagatgacaaagagtcatctatgattatac
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 2516 261 -     26361 --cg----ggg---g-cagtctt-gtgggactgaaccctgaactcatgggatctgatgctatctccagatagatagcctcaggattg---aattgaactgtaggacaccagttggtgtcctgagaattg-aag--------aattggttggggtgagactaaatccacaa---atttgat---------------ctcagaagtttgaatagaaacaattctgttggaaaacattatcattagatcaaaggtgttcatagaactgagagaacaagatgacaaagagtcacctatgattatac
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 5706 261 -      7381 --tg----ggg---g-cagtctt-gtgggactgaactctgaactcatgggatctgatgctatctccagatagatagcctcaggattg---aattgaactgtaggacaccagttggtgtcctgagaattg-aag--------aattggttggggtgagactaaatccacaa---atttgat---------------ctcagaagtttgaatagaaacaattctgttggaaaacattatcattagatcaaaggtgttcatagaactgagagaacaagatgacaaagagtcatctatgattatac
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  48931 261 -     79256 --cg----ggg---g-cagtctt-gtgggactgaaccctgaactcatgggatctgatgctatctccagatagatagcctcaggattg---aattgaactgtaggacaccagttggtgtcctgagaattg-aag--------aattggttggggtgagactaaatccacaa---atttgat---------------ctcagaagtTTGAATAGAAACAATTCTGTtggaaaacattatcattagatcaaaggtgttcatagaacagagagaacaagatgacaaagagtcatctatgattatac
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196039033 261 + 196197964 --cg----ggg---g-cagtctt-gtgggactgaaccCTGAActcatgggatctgatgctatctccagatAGATAGCCTCAGGATTG---AATTGAACTGTAGGACACCAGTTGGTGTCCTGAGAATTG-AAG--------AATTGGTTGGGGTGAGACTAAATCCACAA---ATTTGAT---------------CTCAGAAGTTTGAATAGAAACAATTCTGTTGGAAAACATTATCATTAGATCAAAGGTGTTCATAGAACTGAGAGAACAAGATGACAAAGAGTCATCTATGATTATAC
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11449199 261 +  11645122 --cg----ggg---g-cagtctt-gtgggactgaaccCTGAActcatgggatctgatgctatctccagatAGATAGCCTCAGGATTG---AATTGAACTGTAGGACACCAGTTGGTGTCCTGAGAATTG-AAG--------AATTGGTTGGGGTGAGACTAAATCCACAA---ATTTGAT---------------CTCAGAAGTTTGAATAGAAACAATTCTGTTGGAAAACATTATCATTAGATCAAAGGTGTTCATAGAACTGAGAGAACAAGATGACAAAGAGTCATCTATGATTATAC
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   7885 261 -     46448 --cg----ggg---g-cagtctt-gtgggactgaaccctgaactcatgggatctgatgctatctccagatagatagcctcaggattg---aattgaactgtaggacaccagttggtgtcctgagaattg-aag--------aattggttggggtgagactaaatccacaa---atttgat---------------ctcagaagtttgaatagaaacaattctgttggaaaacattatcattagatcaaaggtgttcatagaactgagagaacaagatgacaaagagtcatctatgattatac
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                5551 261 -     13212 --cg----ggg---g-cagtctt-gtgggactgaaccctgaactcatgggatctgatgctatctccagatagatagcctcaggattg---aattgaactgtaggacaccagttggtgtcctgagaattg-aag--------aattggttggggtgagactaaatccacaa---atttgat---------------ctcagaagtTTGAATAGAAACAATTCTGTCggaaaacattatcattagatcaaaggtgctcatagaactgagagaacaagatgacaaagagtcatctatgattatac
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 19228 261 -     55006 --tg----ggg---g-cagtctt-gtgggactgaaccctgaactcatgggatctgatgctatctccagatagatagcctcaggattg---aattgaactgtaggacaccagttggtgtcctgagaattg-aag--------aattggttggggtgagactaaatccacaa---atttgat---------------ctcagaagtTTGAATAGAAACAATTCTGTtggaaaacattatcattagatcaaaggtgttcatagaactgagagaacaagatgacaaagagtcatctatgattatac
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43844347 261 +  43892939 --tg----ggg---g-cagtctt-gtgggactgaaccctgaactcatgggatctgatgctatctccagatagatagcctcaggattg---aattgaactgtaggacaccagttggtgtcctgagaattg-aag--------aattggttggggtgagactaaatccacaa---atttgat---------------ctcagaagtTTGAATAGAAACAATTCTGTtggaaaacattatcattagatcaaaggtgttcatagaactgagagaacaagatgacaaagagtcatctatgattatac
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               20515 261 -     24607 --tg----ggg---g-cagtctt-gtgggactgaaccctgaactcatgggatctgatgctatctccagatagatagcctcaggattg---aattgaactgtaggacagcagttggtatcctgagagttg-aag--------aattggttggggtgagactaaatccacaa---atttgat---------------ctcagaagtTTGAATAGAAACAATTCTGTCggaaaacattatcattagatcaaaggtgttcatagaactgagagaacaagatgacaaagagtcatctatgattatac
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               7882 261 -     27140 --cg----ggg---g-cagtctt-gtgggactgaaccctgaactcatgggatctgatgctatctccagatagatagcctcaggattg---aattgaactgtaggacaccagttggtgtcctcagaattg-aag--------aattggttggagtgagactaaatccacaa---atttgat---------------ctcagaagtttgaatagaaacaattctgttggaaaacattatcattagatcaaaggtgttcatagaacagagagaacaagatgacaaagagtcatctatgattatac
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43440914 269 -  43563597 --cg----ggg---g-cagtctt-gtgggactgaaccctgaactcgtgggatctgatgctatctccagatagatagcctcaggatta---aattgaactgtaggacaccagttggtgtcctgagaattg-aagaattgaagaattggttggggtgagactaaatccacaa---atttgat---------------ctcagaagtTTGAATAGAAACAATTCTGTtggaaaacattatcatcagatcaaaggtgttcatagaactgagagaacaagatgacaaagagtcatctatgattatac
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4453726 261 -   4543643 --cg----ggg---g-cagtctt-gtgggactgaaccctgaactcgtgggatctgatgctatctccagatagatagcctcaggatta---aattgaactgtaggacaccagttggtgtcctgagaattg-aag--------aattggttggggtgagactaaatccacaa---atttgat---------------ctcagaagtTTGAATAGAAACAATTCTGTtggaaaacattatcatcagatcaaaggtgttcatagaactgagagaacaagatgacaaagagtcatctatgattatac
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         5468 261 +     29742 --cg----ggg---g-cagtctt-gtgggactgaaccctgaactcaagggatctaatgctatctccagatagatagcctcaggactg---aattgaattgtaggacaccagttggtgtcctgagagttg-aag--------aattggttggggtgagactaaatctacaa---atttgat---------------ctcagaagtttgaatagaaacaattctgttggaaaacattatcattagatcaaaggtgttcatagaactgagaggacaagatgacaaagagtcatctatgattatac
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Nomascus_annamensis.k141_1817463                            150 267 -      1070 ggggtgtgggg---g-cagtctt-gtgggcgtgaaccctgaacttgtgggatctgatgctatctccagatagacagtctcaggattg---aattgaattgtaggacaccagttggtgtcctgagagttg-aag--------aattgattggggtgagactaaatccagaa---atttgat---------------ctcagaagtttgagtagaAGCAATTCTATtggaaaacgttgtcattagatcgaaggtgttcatagaaccgagagatcaagatgacaaagagtcatctgtgatgacac
i Nomascus_annamensis.k141_1817463                      C 0 C 0
s Nomascus_concolor.k141_70405                                153 264 +      1153 gcgg----gggggag-cagtctt-gtgggactgaaccctgaacttgtgggatctgatgctatctccagatagacagtctcaggattg---aattgaattgtaggacaccagttggtgtcctgagagttg-aag--------aattgattggggtgagactaaatccacaa---atttgat---------------ctcggaagtttgagtagaAGCAATTCTATtggaaaacattttcattagatcaaaggtgttcatagaactgagagatcaagatgaca--gagtcatctgtgacgacac
i Nomascus_concolor.k141_70405                          C 0 C 0
s Nomascus_gabriellae.k141_1400361                            130 222 -      2203 --------------------------------------------------atctgatgctatctccagatagacagtctcaggattg---aattgaattgtaggacatcagttggtgtcctgagagttg-aag--------aattgattgaggtgagactaaatccacaa---atttgat---------------ctcagaagtttgagtagaAGCAATTCTACtggaaaacattgtcattagatcaaaggtattcatagaaccgagagatcaagatgacaaagagtcatctgtgatgacac
i Nomascus_gabriellae.k141_1400361                      I 45 C 0
s Nomascus_siki_b.tarseq_2374                            1823 213 +      8673 -----------------------------------------------------------tatctccagatagacagtctcaggattg---aattgaattgtaggacaccagttggtgtcctgagagttg-aag--------aattgattgaggtgagactaaatccacaa---atttgat---------------ctcagaagtttgagtagaAGCAATTCTATtggaaaacattgtcattagatcaaaggtattcatagaaccgagagatcaagatgacaaagagtcatctgtgatgacac
i Nomascus_siki_b.tarseq_2374                       I 541 I 6
s Nomascus_siki_a.k141_421408                                    49 213 +     16235 -----------------------------------------------------------tatctccagatagacagtctcaggattg---aattgaattgtaggacaccagttggtgtcctgagagttg-aag--------aattgattggggtgagactaaatccacaa---atttgat---------------ctcggaagtttgagtagaAGCAATTCTATTGGAAAACATTGTCATTAGATCAAAGGTGTTCATAGAACCGAGAGATCAAGATGACAAAGAGTCATCTGTGATGACAC
i Nomascus_siki_a.k141_421408                             n 312 C 0
s Pan_paniscus.CM003386.1                               127577933 240 - 205426864 Gggg----ggg---g-cagtctt-gtgggtcTGAACCCTGAacttgtgggatctgatgctatctccagatAGATAGTCTCAggattg---aattgaattgtaggacaccAGTTGGTGTCCTGAGAGTTG-AAG--------AATTGGTTGGGGTGAGACTAAATCCACAA---ATTTGAT---------------CTCAGAAGTTTGAGTAGAAACAATTCTGTTGGAAAACATTATCATTAGATCAAAGGTGTTCATAGAACTGAGAGATCAAGATGA-----------------------
i Pan_paniscus.CM003386.1                               I 1 C 0
s Pan_troglodytes.KZ622857.1                               332618 260 +    772158 ---G----GGC---G-CAGTCTT-GTGGGCCTGAACCCTGAACTtttgggatctgatgctatctccagatAGATAGTCTCAggattg---aattgaattgtaggacaccATTTGGTGTCCTGAGAGTTG-AAG--------AATTGATTGGGGTGAGACTAAATCCACAA---ATTTGAT---------------CTCAGAAGTTTGAGTAGAAATAATTCTGTTGGAAAACATTATCATTAGATCAAAGGTGTTCATAGAACTGAGAGATCAAAATGGCAAAGAGTCATCTATGATTACAC
i Pan_troglodytes.KZ622857.1                            C 0 C 0
s Papio_anubis.CM001492.2                               188159711 261 - 188283584 --cg----ggg---g-cagtctt-gtgggactgaaccCTGAACtcgtgggatctgatgctatctccagatAGATAGCCTCAGGATTG---AATTGAACTGTAGGACAGCAGTTGGTGTCCTGAGAGTTG-AAG--------AATTGGTTGGGGTGAGACTAAATCCACAA---ATTTGAT---------------CTCAGAAGTTTGAATAGAAACAATTCTGTTGGAAAACATTATCATTAGATCAAAGGTGCTCATAGAACTGAGAGAACAAGATGACAAAGAGTCATCTATGATTATAC
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              2801 261 +     25005 --cg----ggg---g-cagtctt-gtgggactgaaccctgaactcgtgggatctgatgctatctccagatagatagcctcaggattg---aattgaactgtaggacaccagttggtgtcctgagaattg-aag--------aattggttggggtgagactaaatccacaa---atttgat---------------ctcagaagtttgaatagaaacaattctgttggaaaacattatcatcagatcaaaggtgttcacagaactgagagaacaagatgacaaagagtcatctatgattatac
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47517083 261 +  47705337 --cg----ggg---g-cagtctt-gtgggactgaaccctgaactcgtgggatctgatgctatctccagatagatagcctcaggattg---aattgaactgtaggacagcagttggtgtcctgagagttg-aag--------aattggttggggtgagactaaatccacaa---atttgat---------------ctcagaagtTTGAATAGAAACAATTCTGTtggaaaacattatcattagatcaaaggtgctcatagaactgagagaacaagatgacaaagagtcatctatgattatac
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 71074 261 -    104429 --cg----ggg---g-cagtctt-gtgggactgaaccctgaactcgtgggatctgatgctatctccagatagatagcctcaggattg---aattgaactgtaggacaccagttggtgtcctgagaattg-aag--------aattggttggggtgagactaaatccacaa---atttgat---------------ctcagaagtTTGAATAGAAACAATTCTGTtggaaaacattatcattagatcaaaggtgctcatagaactgagagaacaagatgacaaagagtcatctatgattatac
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    9606 261 +     14967 --cg----ggg---g-cagtctt-gtgggactgaaccctgaactcgtgggatctgatgctatctccagatagatagcctcaggattg---aattgaactgtaggacagcagttggtgtcctgagagttg-aag--------aattggttggggtgagactaaatccacaa---atttgat---------------ctcagaagtttgaatagaaacaattctgttggaaaacattatcattagatcaaaggtgctcatagaactgagagaacaagatgacaaagagtcatctatgattatac
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 5471 261 -      7628 --cg----ggg---g-cagtctt-gtgggactgaaccctgaactcgtgggatctgatgctatctccagatagatagcctcaggattg---aattgaactgtaggacaccagttggtgtcctgagaattg-aag--------aattggttggggtgagactaaatccacaa---atttgat---------------ctcagaagtttgaatagaaacaattctgttggaaaacattatcatcagatcaaaggtgttcacagaactgagagaacaagatgacaaagagtcatctatgattatac
i Papio_ursinus.k141_1345919                            C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       25428 259 +     44506 --gg----gag---g-cagtctt-gtgggactgaactctgaacttgtgggatctcatgctatctctggatagacagtcttaggattg---aattggattgtaagacaccaattggtgacctgagagtcg-gag--------aattggttggggtgagactaaaaccacaa---atttgat---------------ctcagaagtctgagtaaaaacaattatgttGGTAAACGTTaccatgagatcagaggtgttcatagaattaagagatcaagatgaca--gagtcgtctatgattacac
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        25641 259 +     67491 --gg----gag---g-cagtctt-gtggtactgaaccctgaacttgtgggatctcatgctatctctggatagacagtcttaggattg---aattggattgtaagacaccaattggtgacctgagagtcg-gag--------aattggttggggtgagactaaaaccacaa---atttgat---------------ctcagaagtctgagtaaaaacaattatgttGGTAAACATTaccatgagatcagaggtgttcatagaattaagagatcaagatgaca--gagtcgtctacgattacac
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      15880 259 -     98129 --gg----gag---g-cagtctt-gtgggactgaaccctgaacttgtgggatctcatgctatctctggatagacagtcttaggattg---aattggattgtaagacaccaattggtgacctgagagtcg-gag--------aattggttggggtgagactaaaaccacaa---atttgat---------------ctcagaagtctgagtaaaaacaattatgttGGTAAACATTaccatgagatcagaggtgttcacagaattaagagatcaagatgaca--gagtcgtctatgattacac
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     25480 259 +    147771 --gg----gag---g-cagtctt-gtgggactgaactctgaacttgtgggatctcatgctatctctggatagacagtcttaggattg---aattggattgtaagacaccaattggtgacctgagagtcg-gag--------aattggttggggtgagactaaaaccacaa---atttgat---------------ctcagaagtctgagtaaaaacaattatgttGGTAAACATTaccatgagatcagaggtgttcatagaattaagagatcaagatgaca--gagtcgtctatgaatacac
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         2116 259 -     43940 --gg----gag---g-cagtctt-gtgggactgaactctgaacttgtgggatctcatgctatctctggatagacagtcttaggattg---aattggattgtaagacaccaattggtgacctgagagtcg-gag--------aattggttggggtgagactaaaaccacaa---atttgat---------------ctcagaagtctgagtaaaaacaattatgttGGTAAACATTaccatgagatcagaggtgttcatagaattaagagatcaagatgaca--gagtcgtctatgattacac
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          6199 259 -     55515 --gg----gag---g-cagtctt-gtgggactgaaccctgaacttgtgggatctcatgctatctctggatagacagtcttaggattg---aattggattgtaagacaccaattggtgacctgagagtcg-gag--------aattggttggggtgagactaaaaccacaa---atttgat---------------ctcagaagtctgagtaaaaacaattatgttGGTAAACATTaccatgagatcagaggtgttcatagaattaagagatcaagatgaca--gagtcgtctatgattacac
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         25553 259 +    152463 --gg----gag---g-cagtctt-gtgggactgaactctgaacttgtgggatctcatgctatctctggatagacagtcttaggattg---aattggattgtaagacaccaattggtgacctgagagtcg-gag--------aattggttggggtgagactaaaaccacaa---atttgat---------------ctcagaagtctgagtaaaaacaattatgttGGTAAACATTaccatgagatcagaggtgttcatagaattaagagatcaagatgaca--gagtcgtctatgattacac
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       3361 259 -    119457 --gg----gag---g-cagtctt-gtgggactgaactctgaacttgtgggatctcatgctatctctggatagacagtcttaggattg---aattggattgtaagacaccaattggtgacctgagagtcg-gag--------aattggttggggtgagactaaaaccacaa---atttgat---------------ctcagaagtctgagtaaaaacaattatgttGGTAAACATTaccatgagatcagaggttttcatagaattaagagatcaagatgaca--gagtcgtctatgattacac
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         15276 259 +    134592 --gg----gag---g-cagtctt-gtgggactgaactctgaacttgtgggatctcatgctatctctggatagacagtcttaggattg---aattggattgtaagacaccaattggtgacctgagagtcg-gag--------aattggttggggtgagactaaaaccacaa---atttgat---------------ctcagaagtctgagtaaaaacaattatgttGGTAAACATTaccatgagatcagaggtgttcatagaattaagagatcaagatgaca--gagtcgtctatgaatacac
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          25863 259 -     75465 --gg----gag---g-cagtctt-gtgggactgaactctgaacttgtgggatctcatgctatctctggatagacagtcttaggattg---aattggattgtaagacaccaattggtgacctgagagtcg-gag--------aattggttggggtgagactaaaaccacaa---atttgat---------------ctcagaagtctgagtaaaaacaattatgttGGTAAACATTaccatgagatcagaggtgttcatagaattaagagatcaagatgaca--gagtcgtctatgattacac
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              190451 259 -    373494 TAGG----GGG---G-CAGTCCT-GTGGGCCTGAACCCTGAACTTGTGGGATCTGAGGCTATCTCCAGATA----GTCTCAGGattg---aattgaattgtaggaCACCAGTTGGTGTCCTGAGAGTTG-AAG--------AATTGGTTGGGGTGAGACTAAATCCACAA---ATTTGAT---------------CTCAGAAGTTTGAGTAGAAACAATTCTGTTGGAAAACATTATCATTAGATCAAAGGTGTTCATAGAACTGAGAGATCAAGATGACAAAGAGTCATCTATGATTACAC
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19811098 259 +  19899266 tagg----ggg---g-cagtcct-gtgggcctgaaccctgaacttgtgggatctgaggctatctccagata----gtctcaggattg---aattgaattgtaggacaccagttggtgtcctgagagttg-aag--------aattggttggggtgagactaaatccacaa---atttgat---------------ctcagaagtttgagtagaaacaaTTCTGTtggaaaacattatcattagatcaaaggtgttcatagaactgagagatcaagatgacaaagagtcatctatgattacac
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15675899 246 -  43202129 --Gg----gag---g-cagtctt-gtgggactgaaccCTGAACTTGTGGGATCT-----CGTCTCCAGACAGATAGTCTCAGG-------------ATTGTAGGACACCAACTGGTGACCTGAGAGTTG-GAG--------AATTGGTTGGGGTGAGACTAAATCCACAA---ACTTGAT---------------CTCAGAAGATTGAGTAAAAACAATACTGTTGGAAAACATTACCATTAGATCAGAGGTGTTCATAGAATTGAGAGATCAAGATAACAAAGAGTCATCTATGATTACAC
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        7812 246 +     34089 --gg----gag---g-cagtctt-gtgggactgaaccctgaacttgtgggatct-----cgtctccagacagatagtctcagg-------------attgtaggacaccaactggtgacctgagagttg-gag--------aattggttggggtgagactaaatccacaa---acttgat---------------ctcagaagATTGAGTAAAAACAATACTGTtggaaaacattaccattagatcataggtgttcatagaattgagagatcaagataacaaagagtcatctatgattacac
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              7754 246 -     60842 --gg----gag---g-cagtctt-gtgggactgaaccctgaacttgtgggatct-----cgtctccagacagatagtctcagg-------------attgtaggacaccaactggtgacctgagagttg-gag--------aattggttggggtgagactaaatccacaa---acttgat---------------ctcagaagATTGAGTAAAAACAATACTGTtggaaaacattaccattagatcagaggtgttcatagaattgagagatcaagataacaaagagtcatctatgattacac
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              7847 246 +     67014 --gg----gag---g-cagtctt-gtgggactgaaccctgaacttgtgggatct-----cgtctccagacagatagtctcagg-------------attgtaggacaccaactggtgacctgagagttg-gag--------aattggttggggtgagactaaatccacaa---acttgat---------------ctcagaagATTGAGTAAAAACAATACTGTtggaaaacattaccattagatcagaggtgttcatagaattgagagatcaagataacaaagagtcatctatgattacac
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              7825 246 +     60816 --gg----gag---g-cagtctt-gtgggactgaaccctgaacttgtgggatct-----cgtctccagacagatagtctcagg-------------attgtaggacaccaactggtgacctgagagttg-gag--------aattggttggggtgagactaaatccacaa---acttgat---------------ctcagaagATTGAGTAAAAACAATACTGTtggaaaacattaccattagatcagaggtgttcatagaattgagagatcaagataacaaagagtcatctatgattacac
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 7762 246 -     76454 --gg----gag---g-cagtctt-gtgggactgaaccctgaacttgtgggatct-----cgtctccagacagatagtctcagg-------------attgtaggacaccaactggtgacctgagagttg-gag--------aattggttggggtgagactaaatccacaa---acttgat---------------ctcagaagATTGAGTAAAAACAATACTGTtggaaaacattaccattagatcagaggtgttcatagaattgagagatcaagataacaaagagtcatctatgattacac
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17344538 261 -  30362882 --gg----gag---g-cagtctt-gtggggctgaaccttgaacttgtagaatcggatgctatctccagatagatagtctcaggattg---aattgaattgtaggacaccaattggtgacccgagagttg-gag--------aattggttggggtgagactaaatccacaa---atttgat---------------ctcagaagATTGAGTAAAAACAATAATGTtggaaaacattaccattagatcagaggtattcatagaattgagagatcaagatgacaaagagtcatctatgattacaa
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         23859 261 -     62485 --gg----gag---g-cagtctt-gtggggctgaaccttgaacttgtagaatcggatgctatctccagatagatagtctcaggattg---aattgaattgtaggacaccaattggtgacccgagagttg-gag--------aattggttggggtgagactaaatccacaa---atttgat---------------ctcagaagATTGAGTAAAAACAATAATGTtggaaaacattaccattagatcagaggtattcatagaattgagagatcaagatgacaaagagtcatctatgattacaa
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        18123 261 -  13920577 --gg----ggg---g-cagtctt-gtgggcctgaaccctgaacttgtgggatctgatgctatctccagatagacagtctcaggattg---aattgaattgtaggacaccagttggtgtcctgagagttg-aag--------aattgattggggtgagactaaatccacaa---atttgat---------------ctcagaagtttgagtagaAGCAATTCTATtggaaaacattgtcattagatcgaaggtgttcatagaaccgagagatcaagatgacaaaaagtcatctgtgatgacac
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Theropithecus_gelada.CM009951.1                       194011243 262 - 194193292 --cg----ggg---g-cagtctt-gtgggactgaaccCTGAACtcgtgggatctgatgctatctccagatAGATAGCCTCAGGATTG---AATTGAACTGTAGGACACCAGTTGGTGTCCTGAGAATTGGAAG--------AATTGGTTGGGGTGAGACTAAATCCACAA---ATTTGAT---------------CTCAGAAGTTTGAATAGAAACAATTCTGTTGGAAAACATTATCATCAGATCAAAGGTGTTCACAGAACTGAGAGAACAAGATGACAAAGAGTCATCTATGATTATAC
i Theropithecus_gelada.CM009951.1                       C 0 C 0
e Eptesicus_fuscus.JH977687.1                             4708429 237 +   6522550 I
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590  76 -     47444 I
e Petromus_typicus.PetTyp_scaffold_33007                    16921   0 -     36578 C
e Sorex_araneus.JH798170.1                               17769647   0 -  27805282 C
e Dinomys_branickii.DinBra_scaffold_1996                   158442 1030 +    228994 I
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           4051 456 -      6963 I
e Oryctolagus_cuniculus.CM000803.1                      141878516 2929 + 163896628 I
e Ochotona_princeps.JH802095.1                            4996729 2205 -  23139505 I
e Lepus_americanus.LepAme_scaffold_62849                    15480 2946 +     22452 I
e Perognathus_longimembris.PerPac_flattened_line_19359       1614  38 +     49596 I
e Dipodomys_stephensi.DipSte_scaffold_84338                  1789  28 -     11986 I
e Dipodomys_ordii.KN672545.1                              3659429  30 +   4240102 I
e Suricata_suricatta.SurSur_flattened_line_20339            32401   0 +     62062 C
e Ziphius_cavirostris.ZipCav_flattened_line_60625            1538   2 -     13665 I
e Zalophus_californianus.ZalCal_flattened_line_4097        219280   0 -    227762 C
e Vulpes_lagopus.VulLag_flattened_line_2045                143835   0 -    281493 C
e Vicugna_pacos.KN269600.1                                1527832   0 -   2331223 C
e Ursus_maritimus.KK498671.1                              6519892   0 +  28682327 C
e Uropsilus_gracilis.UroGra_scaffold_69449                   9768   0 +     10241 C
e Tursiops_truncatus.MRVK01000923.1                      69316794   2 -  96451834 I
e Trichechus_manatus.JH594618.1                          16088878   0 +  31416278 C
e Tragulus_javanicus.TraJav_scaffold_14717                   9149   2 +     90398 I
e Tonatia_saurophila.TonSau_scaffold_3334                  137563 275 -    259118 I
e Tapirus_terrestris.TapTer_scaffold_14939                  61041   0 +     99546 C
e Tapirus_indicus.TapInd_scaffold_176                      810399   0 +   1148477 C
e Tamandua_tetradactyla.TamTet_scaffold_26877               16259 379 +     45698 I
e Tadarida_brasiliensis.TadBra_scaffold_61492                1822 242 +     20549 I
e Sus_scrofa.CM000824.4                                 189273670 1086 + 218635234 I
e Spilogale_gracilis.SpiGra_flattened_line_905             238244   0 -    276980 C
e Solenodon_paradoxus.SolPar_flattened_line_1012            23185   0 +    739146 C
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   39231   0 -    114521 C
e Saiga_tatarica.SaiTat_scaffold_1069354                      105   0 -       709 C
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Rhinolophus_sinicus.LVEH01000179.1                      1792212   2 +   2252614 I
e Rangifer_tarandus.RanTarSib_scaffold_24239                20109   0 +     68503 C
e Puma_concolor.QAVW01000427.1                          131539433   0 - 161321710 C
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Pteronura_brasiliensis.PteBra_flattened_line_1343        249686   0 -    344369 C
e Pteronotus_parnellii.KE867983.1                            5588 252 -     27784 I
e Procavia_capensis.ProCapCap_scaffold_11797                50321   0 -     88779 C
e Platanista_gangetica.PlaMin_flattened_line_72990           8998   2 +     21690 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Phocoena_phocoena.PhoPho_flattened_line_53071              2530   2 +      8220 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    120818   0 -    135482 C
e Pantholops_hodgsonii.KE114631.1                         1071126   0 -   1292953 C
e Panthera_tigris.KE721879.1                              5032785   0 -   6340057 C
e Panthera_pardus.KV860323.1                              3643137   0 +  18214204 C
e Panthera_onca.PanOnc_flattened_line_1615                  39322   0 +    295523 C
e Ovis_canadensis.OviCan_scaffold_6251                      83485   0 +    140051 C
e Ovis_aries.CM001582.2                                 134082257   0 - 275406953 C
e Otocyon_megalotis.JAEUCK010005121.1                      314612   0 -    505867 C
e Orycteropus_afer.OryAfe_flattened_line_13509              63439   0 -     66828 C
e Orcinus_orca.KB316965.1                                 7228065   2 -   7562323 I
e Okapia_johnstoni.LVCL01S0017931.1                         41334   0 +     78940 C
e Odocoileus_virginianus.KZ101650.1                       1083245   0 +   1425656 C
e Odobenus_rosmarus.KB229369.1                             684428   0 -   3126709 C
e Nyctereutes_procyonoides.CAJHUB010000786.1                37467   0 +   3668941 C
e Noctilio_leporinus.NocLep_scaffold_12062                  50214  77 +     94413 I
e Neophocaena_asiaeorientalis.KZ688543.1                  3954389   2 -   4490290 I
e Neomonachus_schauinslandi.NINY01007774.1                4489721   0 -  14209539 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             6589 379 -      8794 I
e Myotis_myotis.MyoMyo_scaffold_6123                        13515 236 +     66751 I
e Myotis_lucifugus.GL429887.1                             3468272 238 -   3747815 I
e Myotis_davidii.KB114863.1                               5022194 233 +   6462685 I
e Myotis_brandtii.KE161952.1                               970769 237 +   8389877 I
e Mustela_putorius.JH417978.1                             4427567   0 -  28371801 C
e Murina_feae.MurFea_scaffold_2254                          23900 236 -    100666 I
e Mungos_mungo.MunMun_flattened_line_8729                  149746   0 -    168139 C
e Moschus_moschiferus.MosMos_scaffold_78805                  5813   0 -     19904 C
e Mormoops_blainvillei.MorMeg_scaffold_2952                162937 259 +    265003 I
e Monodon_monoceros.MonMon_M_scaffold_5598                 149798   2 +    154973 I
e Mirounga_angustirostris.MirAng_flattened_line_8852        16322   0 -    104932 C
e Miniopterus_schreibersii.MinSch_scaffold_24116            36998 214 +     45743 I
e Miniopterus_natalensis.LDJU01000022.1                   8212509 213 +  10048721 I
e Micronycteris_hirsuta.MicHir_scaffold_37978               24387 274 -     32043 I
e Microgale_talazaci.MicTal_scaffold_34660                  40768   0 -     48017 C
e Mesoplodon_bidens.MesBid_scaffold_96348                    2003   2 -     12939 I
e Mellivora_capensis.MelCap_flattened_line_15433             5726   0 -     87323 C
e Megaderma_lyra.MegLyr_scaffold_3562                       65026   2 -    234502 I
e Manis_pentadactyla.KN017078.1                             39380   0 +     58827 C
e Manis_javanica.JSZB01003966.1                            149232   0 +    252755 C
e Lycaon_pictus.CM007556.1                               11094608   0 +  39895028 C
e Loxodonta_africana.GL010040.1                          20597894   0 -  62548349 C
e Lipotes_vexillifer.KE558548.1                            139369   2 +   3060487 I
e Leptonychotes_weddellii.KB714749.1                      3090826   0 -   3498232 C
e Lasiurus_borealis.LasBor_scaffold_59542                    5042 241 +     26176 I
e Kogia_breviceps.KogBre_flattened_line_35920               26998   2 +     37189 I
e Inia_geoffrensis.IniGeo_flattened_line_66725              12417   2 +     17520 I
e Hyaena_hyaena.HyaHya_flattened_line_20729                 22640   0 -     67322 C
e Hipposideros_galeritus.HipGal_scaffold_52959                377   2 +     26078 I
e Hipposideros_armiger.JXIK01001085.1                      282608   2 -    477199 I
e Hippopotamus_amphibius.HipAmp_scaffold_1308              150208   0 +    277961 C
e Heterohyrax_brucei.HetBruBak_scaffold_13814               68359   0 -    108006 C
e Hemitragus_hylocrius.HemHyl_scaffold_16669                32467   0 -     91191 C
e Helogale_parvula.HelPar_flattened_line_22962              22066   0 +     53719 C
e Giraffa_tippelskirchi.LVKQ01S012154.1                    185599   0 -    189561 C
e Felis_nigripes.FelNig_flattened_line_8080                 26394   0 +     52776 C
e Felis_catus_fca126.CM031420.1                         129285299   0 - 158578461 C
e Eubalaena_japonica.EubJap_flattened_line_7756             64881   0 +     89355 C
e Eschrichtius_robustus.EscRob_flattened_line_685          318424   0 +    330699 C
e Equus_przewalskii.ATBW01073585.1                          16166   0 +     92910 C
e Equus_caballus.CM000402.2                              13354676   0 +  41866177 C
e Equus_asinus.JREZ01000062.1                             5856176   0 -   7175178 C
e Enhydra_lutris.KZ291749.1                              85876835   0 +  99434291 C
e Elephantulus_edwardii.JH947210.1                        7830035 1277 +  15467074 I
e Elaphurus_davidianus.JRFZ01086400.1                     1495795   0 +   1727528 C
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Echinops_telfairi.JH980316.1                           22999931   2 -  44670279 I
e Diceros_bicornis.DicBicMic_scaffold_9545                   6452   0 +    151128 C
e Dicerorhinus_sumatrensis.PEKH010003161.1                 325812   0 +    993696 C
e Desmodus_rotundus.KZ672188.1                           18700517 262 -  18957592 I
e Delphinapterus_leucas.KZ290064.1                       80040207   0 -  96802777 C
e Dasypus_novemcinctus.JH568778.1                          185121 383 -   6883506 I
e Cryptoprocta_ferox.CryFer_flattened_line_19014            56919   0 -     70449 C
e Crocidura_indochinensis.CroInd_scaffold_27484              1226   0 -     22648 C
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1337   2 -      5782 I
e Condylura_cristata.JH655880.1                          60621791   0 +  78930452 C
e Choloepus_hoffmanni.KN194586.1                           763329 503 +    964067 I
e Choloepus_didactylus.ChoDid_scaffold_36182                18024 504 -     21363 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_160623         6920   0 -      9338 C
e Catagonus_wagneri.CatWag_scaffold_1305                   162277   0 -    276539 C
e Carollia_perspicillata.CarPer_scaffold_4436               61226 261 +     67245 I
e Capra_hircus.CM004562.1                               135711414   0 - 157403528 C
e Capra_aegagrus.CM003214.1                              21330197   0 + 157394656 C
e Canis_lupus_orion.HG994411.1                           16461937   0 -  44759192 C
e Canis_lupus_familiaris.chr31                           11095152   0 +  39895921 C
e Canis_lupus_dingo.QKWQ01001993.1                       11272441   0 -  35597290 C
e Canis_lupus_VD.CanFam_VD_scaffold_16982                   20732   0 +     87036 C
e CanFam4.chr31                                          11525758   0 +  39901454 C
e Camelus_ferus.KB016973.1                                2976160   0 +   6889770 C
e Camelus_dromedarius.KN271192.1                           400424   0 -  15254737 C
e Camelus_bactrianus.KN276303.1                           3222722   0 -   8989139 C
e Bubalus_bubalis.KI419065.1                               674242   0 +   1914593 C
e Bos_taurus.CM000177.6                                  22664479   0 + 158972876 C
e Bos_mutus.JH883513.1                                     418090   0 +    998990 C
e Bos_indicus.CM003021.1                                 22955825   0 + 161108492 C
e Bison_bison.KN264915.1                                   301727   0 -   6870073 C
e Beatragus_hunteri.BeaHun_scaffold_21644                   47579   0 -     72089 C
e Balaenoptera_bonaerensis.DF502048.1                        8754   0 -     13118 C
e Balaenoptera_acutorostrata.KI537095.1                  26383581   0 +  51448160 C
e Artibeus_jamaicensis.ArtJam_scaffold_41619                10440 261 -     29036 I
e Antilocapra_americana.AntAmePen_scaffold_27338             2548   0 +     55446 C
e Anoura_caudifer.AnoCau_scaffold_422                      392020 257 -    631301 I
e Ammotragus_lervia.NIVO01013474.1                        3525117   0 +   4113121 C
e Ailurus_fulgens.LNAC01000003.1                          7099380   0 -  16596857 C
e Ailuropoda_melanoleuca.LNAT01000321.1                  10662594   0 +  23371972 C
e Acinonyx_jubatus.LLWD01000356.1                         2038912   0 +   3721120 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           20901   0 -    119109 C
e Glis_glis.GliGli_scaffold_79770                           15993   0 -     18683 C
e Zapus_hudsonius.ZapHud_scaffold_64392                     20218   0 -     20485 C
e Jaculus_jaculus.JH725517.1                              8577088   0 +  11848649 C
e Allactaga_bullata.AllBul_scaffold_70162                   21404   0 -     22067 C
e Galeopterus_variegatus.GalVar_scaffold_354               159184   0 +    324696 C
e Microtus_ochrogaster.CM001673.1                        22823881   0 -  98408828 C
e Xerus_inauris.XerIna_scaffold_7898                       128400 2868 -    134049 I
e Varecia_variegata.k141_775891                             27530   0 -     33872 C
e Varecia_rubra.k141_432109                                  7995   0 -     20643 C
e Tupaia_tana.TupTan_flattened_line_68454                    9338   0 +     13056 C
e Tupaia_chinensis.KB320831.1                             2797404   0 -   3938065 C
e Trachypithecus_pileatus.k141_1022309                       5226   0 +     13828 C
e Trachypithecus_phayrei.ctg3                            44662914   0 -  44834318 C
e Trachypithecus_obscurus.k141_1115109                       8130   0 -     28054 C
e Trachypithecus_melamera.k141_699241                        2986   0 -     24393 C
e Trachypithecus_leucocephalus.k141_381681                   3005   0 +     12481 C
e Trachypithecus_laotum.k141_760702                          4719   0 +     14371 C
e Trachypithecus_hatinhensis.k141_504423                     6067   0 -     15592 C
e Trachypithecus_germaini.k141_868450                        3883   0 -     11566 C
e Trachypithecus_geei.k141_670367                           46082   0 -     54611 C
e Trachypithecus_francoisi.k141_768164                       4689   0 -     14244 C
e Trachypithecus_cristatus.k141_1011511                      5261   0 -     12939 C
e Trachypithecus_crepusculus.k141_1588528                   23360   0 -     32910 C
e Trachypithecus_auratus.k141_738098                        29800   0 +     38948 C
e Tarsius_wallacei.k141_48636                               60532 3805 +     65473 I
e Tarsius_lariang.k141_609102                               27216 3812 +     42269 I
e Spermophilus_dauricus.KZ294190.1                        2243603   0 +   2842873 C
e Sigmodon_hispidus.SigHis_scaffold_11332                  104689   0 -    120886 C
e Semnopithecus_vetulus.k141_1143185                        16479   0 +     30600 C
e Semnopithecus_schistaceus.k141_387461                     33457   0 +     42640 C
e Semnopithecus_priam.k141_410937                           40312   0 +     46263 C
e Semnopithecus_johnii.k141_785014                         121532   0 +    130994 C
e Semnopithecus_hypoleucos.k141_761524                      11528   0 +     20762 C
e Semnopithecus_entellus.k141_1572367                        6153   0 +     15331 C
e Rhinopithecus_strykeri.ctg4                            44859307   0 -  45163003 C
e Rhinopithecus_bieti.k119_554384                            2917   0 -     17045 C
e Rattus_norvegicus.chr11                                13917336   0 +  90463843 C
e Pygathrix_nigripes_a.k141_101123                             8537   0 +     18040 C
e Pygathrix_nigripes_b.ctg79                                 6809148   0 +   6970761 C
e Pygathrix_cinerea.k141_374971                             32651   0 +     56732 C
e Psammomys_obesus.NESX01026517.1                           37921   0 +     77221 C
e Propithecus_verreauxi.k141_158021                         42002   0 -     48185 C
e Propithecus_tattersalli.k141_907138                       19738   0 -     53241 C
e Propithecus_perrieri.k141_7554                            20103   0 +     27322 C
e Propithecus_edwardsi.k141_1317105                         38180   0 -     44753 C
e Propithecus_diadema.k141_577245                           45793   0 +     52369 C
e Propithecus_coronatus.k141_1353159                         6446   0 +     11805 C
e Propithecus_coquerelli.NW_012147863.1                     20390   0 -     30946 C
e Prolemur_simus.MPIZ01000048.1                           6851355   0 +  12164890 C
e Presbytis_mitrata.k141_860013                              8661   0 +     14865 C
e Presbytis_comata.k141_672698                               8546   0 -     15069 C
e Pithecia_vanzolinii.k141_831006                           15424   0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514   0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521   0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292   0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093   0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038   0 +     78826 C
e Pithecia_albicans.k141_991845                             45662   0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000036.1               26743271   0 +  26888534 C
e Piliocolobus_kirkii.k141_929665                            4788   0 +      7694 C
e Piliocolobus_gordonorum.k141_1270531                       5421   0 -     17985 C
e Piliocolobus_badius.k141_1987485                           4802   0 -      5908 C
e Peromyscus_maniculatus.KI615518.1                       4955125   0 -   8017169 C
e Perodicticus_potto.k141_1136815                           10207   0 +     61070 C
e Perodicticus_ibeanus.k141_117958                           9080   0 -     23713 C
e Otolemur_garnettii.GL873528.1                          18011493   0 -  38779656 C
e Otolemur_crassicaudatus.k141_505435                        3512   0 -     53940 C
e Onychomys_torridus.OnyTor_scaffold_12578                  42756   0 +     62360 C
e Ondatra_zibethicus.OndZib_scaffold_6821                  130071   0 +    145789 C
e Octodon_degus.JH651621.1                                3687420 1881 +  10294119 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65678347   0 +  89412551 C
e Nycticebus_coucang.k141_771591                            13545   0 +     16181 C
e Nycticebus_bengalensis.LG16                            65570136   0 -  95554990 C
e Nasalis_larvatus.k141_153429                              11264   0 +     48152 C
e Nannospalax_galili.KL201303.1                            119867   0 +    362372 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     91920 1922 -    117718 I
e Muscardinus_avellanarius.MusAve_scaffold_9643             14525   0 +     98495 C
e Mus_spretus.CM004110.1                                 74336277   0 +  97876770 C
e Mus_pahari.LT608305.1                                  67559927   0 +  89017189 C
e Mus_musculus.chr16                                     75493550   0 +  98207768 C
e Mus_caroli.LT608236.1                                  70771497   0 +  92629107 C
e Mirza_zaza.k141_593947                                     4089   0 -     12809 C
e Microcebus_murinus.CM007691.1                          16513035   0 +  47401472 C
e Mesocricetus_auratus.KB708139.1                         1051192   0 -  26018355 C
e Meriones_unguiculatus.MerUng_scaffold_52233               15570   0 +     15977 C
e Marmota_marmota.CZRN01000005.1                         36877588   0 +  64221397 C
e Loris_tardigradus.ctg97                                 3781302   0 +   6799190 C
e Loris_lydekkerianus.k141_550999                           13563   0 +     84689 C
e Lepilemur_septentrionalis.k141_710646                      1084   0 -     13103 C
e Lepilemur_ruficaudatus.k141_574529                        35037   0 -     38897 C
e Lepilemur_dorsalis.k141_134267                            56656   0 +     63517 C
e Lepilemur_ankaranensis.k141_884009                        27292   0 +     39228 C
e Lemur_catta.scaffold_1                                258409979   0 - 285822530 C
e Indri_indri.k141_2197838                                    116   0 +      3484 C
e Ictidomys_tridecemlineatus.JH393315.1                   7129728   0 +  13083262 C
e Hystrix_cristata.HysCri_scaffold_50788                     7688 1865 +     22540 I
e Heterocephalus_glaber.JH602058.1                        2560252   0 +  31725842 C
e Hapalemur_occidentalis.k141_797938                        48308   0 -     54384 C
e Hapalemur_meridionalis.k141_186231                        31681   0 -     42470 C
e Hapalemur_griseus.k141_1387522                             8432   0 +     56096 C
e Hapalemur_gilberti.k141_279011                             3105   0 -     11661 C
e Hapalemur_alaotrensis.k141_1280836                         4627   0 +     10286 C
e Graphiurus_murinus.GraMur_scaffold_4493                   79386   0 +    118900 C
e Galagoides_demidoff.k141_1769638                          13144   0 +     27357 C
e Galago_senegalensis.k141_964197                           16038   0 -     43889 C
e Galago_moholi.ctg555                                     213680   0 -    847004 C
e Fukomys_damarensis.KN123630.1                          13895732   0 -  19261668 C
e Eulemur_sanfordi.k141_186399                              18623   0 -     29447 C
e Eulemur_rufus.k141_1620292                                35891   0 +     46535 C
e Eulemur_rubriventer.k141_411740                           21157   0 +     26808 C
e Eulemur_mongoz.k141_825972                                18693   0 +     27497 C
e Eulemur_macaco.k141_747087                                 2027   0 -     19505 C
e Eulemur_fulvus.k141_653297                                14043   0 +    109717 C
e Eulemur_flavifrons.k141_903901                            10560   0 +     60246 C
e Eulemur_coronatus.k141_3240342                            14235   0 +     36558 C
e Eulemur_collaris.k141_1015201                              1102   0 -      4292 C
e Eulemur_albifrons.k141_715837                              7832   0 +     13586 C
e Ellobius_talpinus.LOJH01198462.1                           1213   0 -      1901 C
e Ellobius_lutescens.LOEQ01003611.1                        243471   0 -    369425 C
e Dolichotis_patagonum.DolPat_scaffold_14102                39604   0 -     73477 C
e Daubentonia_madagascariensis.ctg11                     16847687   0 +  31942871 C
e Dasyprocta_punctata.DasPun_flattened_line_634             61584   0 -    236241 C
e Cuniculus_paca.CunPac_flattened_line_16637                20446   0 +     26546 C
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 32592 1717 -     67205 I
e Ctenodactylus_gundi.CteGun_scaffold_447                  213664   0 -    956709 C
e Cricetulus_griseus.LT883672.1                          53034667   0 +  72327488 C
e Cricetomys_gambianus.CriGam_scaffold_949                 282297   0 -    399297 C
e Colobus_polykomos.k141_1406057                            19335   0 +     23629 C
e Colobus_guereza.LG08                                  147667351   0 + 156195979 C
e Colobus_angolensis.KN985967.1                          10889423   0 +  10971483 C
e Chinchilla_lanigera.JH721867.1                         15963245 964 +  43084221 I
e Cheirogaleus_medius.k141_133808                           10871   0 +     13308 C
e Cheirogaleus_major.k141_1157592                           61827   0 -     68416 C
e Cephalopachus_bancanus.k141_702587                         8788 3391 +     21754 I
e Cavia_tschudii.CavTsc_scaffold_488                       177725 1742 +    436027 I
e Cavia_porcellus.DS562889.1                             15799553 1742 -  24440124 I
e Cavia_aperea.AVPZ01000278.1                            15787615 1741 -  24422027 I
e Carlito_syrichta.NW_007248099.1                          309764 3411 +    345090 I
e Avahi_peyrierasi.k141_798820                               3156   0 +      6337 C
e Avahi_laniger.k141_2840928                                 9540   0 -     16375 C
e Arctocebus_calabarensis.k141_587554                        4710   0 +      9265 C
e Acomys_cahirinus.AcoCah_scaffold_1625                    117433   0 -    189883 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               17118 3 +    209709 ATT
s Allenopithecus_nigroviridis.k141_2469532                   4981 3 -     60446 att
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         5698 3 -     29318 att
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         4636 3 +     38766 att
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          5592 3 -     80423 att
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_3793077                            38883 3 +     40571 Att
i Alouatta_belzebul.k141_3793077                        n 309 I 1
s Alouatta_caraya.k141_664908                                2534 3 -     12443 gtt
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2476351                             2569 3 +     41985 ATt
i Alouatta_discolor.k141_2476351                        I 313 I 1
s Alouatta_juara.k141_1268583                               10470 3 -     10533 agc
i Alouatta_juara.k141_1268583                           N 0 C 0
s Alouatta_macconnelli.k141_2318944                          2333 3 -     24210 Gtt
i Alouatta_macconnelli.k141_2318944                     C 0 I 289
s Alouatta_nigerrima.k141_2187093                           28915 3 -     30219 Gtt
i Alouatta_nigerrima.k141_2187093                       C 0 I 289
s Alouatta_palliata.k141_2378775                              964 3 +      5328 Gtt
i Alouatta_palliata.k141_2378775                        C 0 C 0
s Alouatta_puruensis.k141_398195                            45105 3 +     45367 Gtt
i Alouatta_puruensis.k141_398195                        C 0 C 0
s Alouatta_seniculus.k141_790278                             4316 3 -      9835 agc
i Alouatta_seniculus.k141_790278                        I 292 C 0
s Aotus_azarae.k141_3170768                                 65932 3 +     78111 gtt
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            8878 3 +     22701 att
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ205344.1                                  170 3 -      7972 ATT
i Aotus_nancymaae.KZ205344.1                            n 3 I 5951
s Aotus_trivirgatus.k141_1740727                             9434 3 -    104377 att
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               9441 3 +     23246 att
i Aotus_vociferans.k141_718647                          C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9542725 3 +  39197703 att
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             63998 3 +     85812 att
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                15011 3 +     89302 att
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             19512 3 -     58268 att
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             67506 3 +    119057 att
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               9475 3 -     25888 att
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Cacajao_ayresi.k141_724503                               117381 3 -    171031 att
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 16401 3 +    125063 att
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                18448 3 -    216513 att
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       10991 3 -    134917 att
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Cebus_albifrons.Contig22                               18894213 3 -  29618158 att
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                11757 3 -     26817 att
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                16000 3 +     25043 att
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cercocebus_atys.KQ010443.1                              6558922 3 +   6739814 ATT
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      30399 3 +     60454 att
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          5603 3 -     21101 att
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         62913 3 -    107033 att
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        5775 3 -     17608 att
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          2939 3 +     45019 att
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           3005 3 +     15177 att
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          5823 3 +     16677 att
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           28011 3 +     35983 att
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11994542 3 +  12117833 att
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46481303 3 +  46592721 att
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      44854 3 -     45581 att
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       5835 3 +     35577 att
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        5629 3 -     25661 att
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        5587 3 -     17744 att
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        25172 3 +     37128 att
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Cheracebus_lucifer.k141_619653                             9038 3 -     18223 ATT
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                               777 3 +    188999 ATT
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           45076 3 +     57117 ATT
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          49755 3 +     54541 ATT
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chiropotes_israelita.k141_1189915                         74560 3 +    196370 att
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          18741 3 +     40510 att
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15143356 3 -  15256731 att
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      37820 3 -     53260 att
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101148379 3 + 101219884 ATT
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Erythrocebus_patas.Contig8                             48780390 3 -  48907691 att
i Erythrocebus_patas.Contig8                            C 0 C 0
s Gorilla_beringei.k141_111300                               8833 3 -     14630 att
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119655933 3 - 195582420 att
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Hoolock_leuconedys.ctg649                                   108463 3 +    115816 att
i Hoolock_leuconedys.ctg649                                I 1943 C 0
s Hylobates_abbotti.k141_1816750                             1291 3 +      3202 att
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1633646                              1261 3 -      2102 att
i Hylobates_agilis.k141_1633646                         C 0 C 0
s Hylobates_klossii.k141_468230                              2777 3 +      5464 att
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14628126 3 -  25970782 att
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                             677 3 +      4161 att
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Lagothrix_lagothricha.k141_12968                          53594 3 -    147782 att
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lophocebus_aterrimus.ctg55                             19252010 3 +  19376315 att
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Macaca_arctoides.k141_2201161                             23761 3 +     74745 att
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12710222 3 +  12821369 att
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                2796 3 -     26467 att
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           50667 3 +     63263 att
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 2777 3 -     26361 att
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 5967 3 -      7381 att
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  49192 3 -     79256 att
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196039294 3 + 196197964 ATT
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11449460 3 +  11645122 ATT
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   8146 3 -     46448 att
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                5812 3 -     13212 att
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 19489 3 -     55006 att
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43844608 3 +  43892939 att
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               20776 3 -     24607 att
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               8143 3 -     27140 att
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43441183 3 -  43563597 att
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4453987 3 -   4543643 att
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         5729 3 +     29742 att
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Nomascus_annamensis.k141_1817463                            417 3 -      1070 att
i Nomascus_annamensis.k141_1817463                      C 0 C 0
s Nomascus_concolor.k141_70405                                417 3 +      1153 att
i Nomascus_concolor.k141_70405                          C 0 C 0
s Nomascus_gabriellae.k141_1400361                            352 3 -      2203 att
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_1022                             375 3 -     11638 att
i Nomascus_siki_b.tarseq_1022                       n 6 C 0
s Nomascus_siki_a.k141_421408                                   262 3 +     16235 ATT
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Pan_troglodytes.KZ622857.1                               332878 3 +    772158 ATT
i Pan_troglodytes.KZ622857.1                            C 0 C 0
s Papio_anubis.CM001492.2                               188159972 3 - 188283584 ATT
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              3062 3 +     25005 att
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47517344 3 +  47705337 att
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 71335 3 -    104429 att
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    9867 3 +     14967 att
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 5732 3 -      7628 att
i Papio_ursinus.k141_1345919                            C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       25687 3 +     44506 att
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        25900 3 +     67491 att
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      16139 3 -     98129 att
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     25739 3 +    147771 att
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         2375 3 -     43940 att
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          6458 3 -     55515 att
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         25812 3 +    152463 att
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       3620 3 -    119457 att
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         15535 3 +    134592 att
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          26122 3 -     75465 att
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              190710 3 -    373494 ATT
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19811357 3 +  19899266 att
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15676145 3 -  43202129 ATT
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        8058 3 +     34089 att
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              8000 3 -     60842 att
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              8093 3 +     67014 att
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              8071 3 +     60816 att
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 8008 3 -     76454 att
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17344799 3 -  30362882 att
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         24120 3 -     62485 att
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        18384 3 -  13920577 att
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Theropithecus_gelada.CM009951.1                       194011505 3 - 194193292 ATT
i Theropithecus_gelada.CM009951.1                       C 0 C 0
e Eptesicus_fuscus.JH977687.1                             4708429 237 +   6522550 I
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Petromus_typicus.PetTyp_scaffold_33007                    16921 0 -     36578 C
e Sorex_araneus.JH798170.1                               17769647 0 -  27805282 C
e Dinomys_branickii.DinBra_scaffold_1996                   158442 1030 +    228994 I
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           4051 456 -      6963 I
e Oryctolagus_cuniculus.CM000803.1                      141878516 2929 + 163896628 I
e Ochotona_princeps.JH802095.1                            4996729 2205 -  23139505 I
e Lepus_americanus.LepAme_scaffold_62849                    15480 2946 +     22452 I
e Perognathus_longimembris.PerPac_flattened_line_19359       1614 38 +     49596 I
e Dipodomys_stephensi.DipSte_scaffold_84338                  1789 28 -     11986 I
e Dipodomys_ordii.KN672545.1                              3659429 30 +   4240102 I
e Suricata_suricatta.SurSur_flattened_line_20339            32401 0 +     62062 C
e Ziphius_cavirostris.ZipCav_flattened_line_60625            1538 2 -     13665 I
e Zalophus_californianus.ZalCal_flattened_line_4097        219280 0 -    227762 C
e Vulpes_lagopus.VulLag_flattened_line_2045                143835 0 -    281493 C
e Vicugna_pacos.KN269600.1                                1527832 0 -   2331223 C
e Ursus_maritimus.KK498671.1                              6519892 0 +  28682327 C
e Uropsilus_gracilis.UroGra_scaffold_69449                   9768 0 +     10241 C
e Tursiops_truncatus.MRVK01000923.1                      69316794 2 -  96451834 I
e Trichechus_manatus.JH594618.1                          16088878 0 +  31416278 C
e Tragulus_javanicus.TraJav_scaffold_14717                   9149 2 +     90398 I
e Tonatia_saurophila.TonSau_scaffold_3334                  137563 275 -    259118 I
e Tapirus_terrestris.TapTer_scaffold_14939                  61041 0 +     99546 C
e Tapirus_indicus.TapInd_scaffold_176                      810399 0 +   1148477 C
e Tamandua_tetradactyla.TamTet_scaffold_26877               16259 379 +     45698 I
e Tadarida_brasiliensis.TadBra_scaffold_61492                1822 242 +     20549 I
e Sus_scrofa.CM000824.4                                 189273670 1086 + 218635234 I
e Spilogale_gracilis.SpiGra_flattened_line_905             238244 0 -    276980 C
e Solenodon_paradoxus.SolPar_flattened_line_1012            23185 0 +    739146 C
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   39231 0 -    114521 C
e Saiga_tatarica.SaiTat_scaffold_1069354                      105 0 -       709 C
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Rhinolophus_sinicus.LVEH01000179.1                      1792212 2 +   2252614 I
e Rangifer_tarandus.RanTarSib_scaffold_24239                20109 0 +     68503 C
e Puma_concolor.QAVW01000427.1                          131539433 0 - 161321710 C
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Pteronura_brasiliensis.PteBra_flattened_line_1343        249686 0 -    344369 C
e Pteronotus_parnellii.KE867983.1                            5588 252 -     27784 I
e Procavia_capensis.ProCapCap_scaffold_11797                50321 0 -     88779 C
e Platanista_gangetica.PlaMin_flattened_line_72990           8998 2 +     21690 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Phocoena_phocoena.PhoPho_flattened_line_53071              2530 2 +      8220 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    120818 0 -    135482 C
e Pantholops_hodgsonii.KE114631.1                         1071126 0 -   1292953 C
e Panthera_tigris.KE721879.1                              5032785 0 -   6340057 C
e Panthera_pardus.KV860323.1                              3643137 0 +  18214204 C
e Panthera_onca.PanOnc_flattened_line_1615                  39322 0 +    295523 C
e Ovis_canadensis.OviCan_scaffold_6251                      83485 0 +    140051 C
e Ovis_aries.CM001582.2                                 134082257 0 - 275406953 C
e Otocyon_megalotis.JAEUCK010005121.1                      314612 0 -    505867 C
e Orycteropus_afer.OryAfe_flattened_line_13509              63439 0 -     66828 C
e Orcinus_orca.KB316965.1                                 7228065 2 -   7562323 I
e Okapia_johnstoni.LVCL01S0017931.1                         41334 0 +     78940 C
e Odocoileus_virginianus.KZ101650.1                       1083245 0 +   1425656 C
e Odobenus_rosmarus.KB229369.1                             684428 0 -   3126709 C
e Nyctereutes_procyonoides.CAJHUB010000786.1                37467 0 +   3668941 C
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Neophocaena_asiaeorientalis.KZ688543.1                  3954389 2 -   4490290 I
e Neomonachus_schauinslandi.NINY01007774.1                4489721 0 -  14209539 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             6589 379 -      8794 I
e Myotis_myotis.MyoMyo_scaffold_6123                        13515 236 +     66751 I
e Myotis_lucifugus.GL429887.1                             3468272 238 -   3747815 I
e Myotis_davidii.KB114863.1                               5022194 233 +   6462685 I
e Myotis_brandtii.KE161952.1                               970769 237 +   8389877 I
e Mustela_putorius.JH417978.1                             4427567 0 -  28371801 C
e Murina_feae.MurFea_scaffold_2254                          23900 236 -    100666 I
e Mungos_mungo.MunMun_flattened_line_8729                  149746 0 -    168139 C
e Moschus_moschiferus.MosMos_scaffold_78805                  5813 0 -     19904 C
e Mormoops_blainvillei.MorMeg_scaffold_2952                162937 259 +    265003 I
e Monodon_monoceros.MonMon_M_scaffold_5598                 149798 2 +    154973 I
e Mirounga_angustirostris.MirAng_flattened_line_8852        16322 0 -    104932 C
e Miniopterus_schreibersii.MinSch_scaffold_24116            36998 214 +     45743 I
e Miniopterus_natalensis.LDJU01000022.1                   8212509 213 +  10048721 I
e Micronycteris_hirsuta.MicHir_scaffold_37978               24387 274 -     32043 I
e Microgale_talazaci.MicTal_scaffold_34660                  40768 0 -     48017 C
e Mesoplodon_bidens.MesBid_scaffold_96348                    2003 2 -     12939 I
e Mellivora_capensis.MelCap_flattened_line_15433             5726 0 -     87323 C
e Megaderma_lyra.MegLyr_scaffold_3562                       65026 2 -    234502 I
e Manis_pentadactyla.KN017078.1                             39380 0 +     58827 C
e Manis_javanica.JSZB01003966.1                            149232 0 +    252755 C
e Lycaon_pictus.CM007556.1                               11094608 0 +  39895028 C
e Loxodonta_africana.GL010040.1                          20597894 0 -  62548349 C
e Lipotes_vexillifer.KE558548.1                            139369 2 +   3060487 I
e Leptonychotes_weddellii.KB714749.1                      3090826 0 -   3498232 C
e Lasiurus_borealis.LasBor_scaffold_59542                    5042 241 +     26176 I
e Kogia_breviceps.KogBre_flattened_line_35920               26998 2 +     37189 I
e Inia_geoffrensis.IniGeo_flattened_line_66725              12417 2 +     17520 I
e Hyaena_hyaena.HyaHya_flattened_line_20729                 22640 0 -     67322 C
e Hipposideros_galeritus.HipGal_scaffold_52959                377 2 +     26078 I
e Hipposideros_armiger.JXIK01001085.1                      282608 2 -    477199 I
e Hippopotamus_amphibius.HipAmp_scaffold_1308              150208 0 +    277961 C
e Heterohyrax_brucei.HetBruBak_scaffold_13814               68359 0 -    108006 C
e Hemitragus_hylocrius.HemHyl_scaffold_16669                32467 0 -     91191 C
e Helogale_parvula.HelPar_flattened_line_22962              22066 0 +     53719 C
e Giraffa_tippelskirchi.LVKQ01S012154.1                    185599 0 -    189561 C
e Felis_nigripes.FelNig_flattened_line_8080                 26394 0 +     52776 C
e Felis_catus_fca126.CM031420.1                         129285299 0 - 158578461 C
e Eubalaena_japonica.EubJap_flattened_line_7756             64881 0 +     89355 C
e Eschrichtius_robustus.EscRob_flattened_line_685          318424 0 +    330699 C
e Equus_przewalskii.ATBW01073585.1                          16166 0 +     92910 C
e Equus_caballus.CM000402.2                              13354676 0 +  41866177 C
e Equus_asinus.JREZ01000062.1                             5856176 0 -   7175178 C
e Enhydra_lutris.KZ291749.1                              85876835 0 +  99434291 C
e Elephantulus_edwardii.JH947210.1                        7830035 1277 +  15467074 I
e Elaphurus_davidianus.JRFZ01086400.1                     1495795 0 +   1727528 C
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Echinops_telfairi.JH980316.1                           22999931 2 -  44670279 I
e Diceros_bicornis.DicBicMic_scaffold_9545                   6452 0 +    151128 C
e Dicerorhinus_sumatrensis.PEKH010003161.1                 325812 0 +    993696 C
e Desmodus_rotundus.KZ672188.1                           18700517 262 -  18957592 I
e Delphinapterus_leucas.KZ290064.1                       80040207 0 -  96802777 C
e Dasypus_novemcinctus.JH568778.1                          185121 383 -   6883506 I
e Cryptoprocta_ferox.CryFer_flattened_line_19014            56919 0 -     70449 C
e Crocidura_indochinensis.CroInd_scaffold_27484              1226 0 -     22648 C
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1337 2 -      5782 I
e Condylura_cristata.JH655880.1                          60621791 0 +  78930452 C
e Choloepus_hoffmanni.KN194586.1                           763329 503 +    964067 I
e Choloepus_didactylus.ChoDid_scaffold_36182                18024 504 -     21363 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_160623         6920 0 -      9338 C
e Catagonus_wagneri.CatWag_scaffold_1305                   162277 0 -    276539 C
e Carollia_perspicillata.CarPer_scaffold_4436               61226 261 +     67245 I
e Capra_hircus.CM004562.1                               135711414 0 - 157403528 C
e Capra_aegagrus.CM003214.1                              21330197 0 + 157394656 C
e Canis_lupus_orion.HG994411.1                           16461937 0 -  44759192 C
e Canis_lupus_familiaris.chr31                           11095152 0 +  39895921 C
e Canis_lupus_dingo.QKWQ01001993.1                       11272441 0 -  35597290 C
e Canis_lupus_VD.CanFam_VD_scaffold_16982                   20732 0 +     87036 C
e CanFam4.chr31                                          11525758 0 +  39901454 C
e Camelus_ferus.KB016973.1                                2976160 0 +   6889770 C
e Camelus_dromedarius.KN271192.1                           400424 0 -  15254737 C
e Camelus_bactrianus.KN276303.1                           3222722 0 -   8989139 C
e Bubalus_bubalis.KI419065.1                               674242 0 +   1914593 C
e Bos_taurus.CM000177.6                                  22664479 0 + 158972876 C
e Bos_mutus.JH883513.1                                     418090 0 +    998990 C
e Bos_indicus.CM003021.1                                 22955825 0 + 161108492 C
e Bison_bison.KN264915.1                                   301727 0 -   6870073 C
e Beatragus_hunteri.BeaHun_scaffold_21644                   47579 0 -     72089 C
e Balaenoptera_bonaerensis.DF502048.1                        8754 0 -     13118 C
e Balaenoptera_acutorostrata.KI537095.1                  26383581 0 +  51448160 C
e Artibeus_jamaicensis.ArtJam_scaffold_41619                10440 261 -     29036 I
e Antilocapra_americana.AntAmePen_scaffold_27338             2548 0 +     55446 C
e Anoura_caudifer.AnoCau_scaffold_422                      392020 257 -    631301 I
e Ammotragus_lervia.NIVO01013474.1                        3525117 0 +   4113121 C
e Ailurus_fulgens.LNAC01000003.1                          7099380 0 -  16596857 C
e Ailuropoda_melanoleuca.LNAT01000321.1                  10662594 0 +  23371972 C
e Acinonyx_jubatus.LLWD01000356.1                         2038912 0 +   3721120 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           20901 0 -    119109 C
e Glis_glis.GliGli_scaffold_79770                           15993 0 -     18683 C
e Zapus_hudsonius.ZapHud_scaffold_64392                     20218 0 -     20485 C
e Jaculus_jaculus.JH725517.1                              8577088 0 +  11848649 C
e Hylobates_pileatus_a.tarseq_592                             35773 13 -     60944 I
e Allactaga_bullata.AllBul_scaffold_70162                   21404 0 -     22067 C
e Galeopterus_variegatus.GalVar_scaffold_354               159184 0 +    324696 C
e Microtus_ochrogaster.CM001673.1                        22823881 0 -  98408828 C
e Xerus_inauris.XerIna_scaffold_7898                       128400 2868 -    134049 I
e Varecia_variegata.k141_775891                             27530 0 -     33872 C
e Varecia_rubra.k141_432109                                  7995 0 -     20643 C
e Tupaia_tana.TupTan_flattened_line_68454                    9338 0 +     13056 C
e Tupaia_chinensis.KB320831.1                             2797404 0 -   3938065 C
e Trachypithecus_pileatus.k141_1022309                       5226 0 +     13828 C
e Trachypithecus_phayrei.ctg3                            44662914 0 -  44834318 C
e Trachypithecus_obscurus.k141_1115109                       8130 0 -     28054 C
e Trachypithecus_melamera.k141_699241                        2986 0 -     24393 C
e Trachypithecus_leucocephalus.k141_381681                   3005 0 +     12481 C
e Trachypithecus_laotum.k141_760702                          4719 0 +     14371 C
e Trachypithecus_hatinhensis.k141_504423                     6067 0 -     15592 C
e Trachypithecus_germaini.k141_868450                        3883 0 -     11566 C
e Trachypithecus_geei.k141_670367                           46082 0 -     54611 C
e Trachypithecus_francoisi.k141_768164                       4689 0 -     14244 C
e Trachypithecus_cristatus.k141_1011511                      5261 0 -     12939 C
e Trachypithecus_crepusculus.k141_1588528                   23360 0 -     32910 C
e Trachypithecus_auratus.k141_738098                        29800 0 +     38948 C
e Tarsius_wallacei.k141_48636                               60532 3805 +     65473 I
e Tarsius_lariang.k141_609102                               27216 3812 +     42269 I
e Spermophilus_dauricus.KZ294190.1                        2243603 0 +   2842873 C
e Sigmodon_hispidus.SigHis_scaffold_11332                  104689 0 -    120886 C
e Semnopithecus_vetulus.k141_1143185                        16479 0 +     30600 C
e Semnopithecus_schistaceus.k141_387461                     33457 0 +     42640 C
e Semnopithecus_priam.k141_410937                           40312 0 +     46263 C
e Semnopithecus_johnii.k141_785014                         121532 0 +    130994 C
e Semnopithecus_hypoleucos.k141_761524                      11528 0 +     20762 C
e Semnopithecus_entellus.k141_1572367                        6153 0 +     15331 C
e Rhinopithecus_strykeri.ctg4                            44859307 0 -  45163003 C
e Rhinopithecus_bieti.k119_554384                            2917 0 -     17045 C
e Rattus_norvegicus.chr11                                13917336 0 +  90463843 C
e Pygathrix_nigripes_a.k141_101123                             8537 0 +     18040 C
e Pygathrix_nigripes_b.ctg79                                 6809148 0 +   6970761 C
e Pygathrix_cinerea.k141_374971                             32651 0 +     56732 C
e Psammomys_obesus.NESX01026517.1                           37921 0 +     77221 C
e Propithecus_verreauxi.k141_158021                         42002 0 -     48185 C
e Propithecus_tattersalli.k141_907138                       19738 0 -     53241 C
e Propithecus_perrieri.k141_7554                            20103 0 +     27322 C
e Propithecus_edwardsi.k141_1317105                         38180 0 -     44753 C
e Propithecus_diadema.k141_577245                           45793 0 +     52369 C
e Propithecus_coronatus.k141_1353159                         6446 0 +     11805 C
e Propithecus_coquerelli.NW_012147863.1                     20390 0 -     30946 C
e Prolemur_simus.MPIZ01000048.1                           6851355 0 +  12164890 C
e Presbytis_mitrata.k141_860013                              8661 0 +     14865 C
e Presbytis_comata.k141_672698                               8546 0 -     15069 C
e Pithecia_vanzolinii.k141_831006                           15424 0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514 0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521 0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292 0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093 0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038 0 +     78826 C
e Pithecia_albicans.k141_991845                             45662 0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000036.1               26743271 0 +  26888534 C
e Piliocolobus_kirkii.k141_929665                            4788 0 +      7694 C
e Piliocolobus_gordonorum.k141_1270531                       5421 0 -     17985 C
e Piliocolobus_badius.k141_1987485                           4802 0 -      5908 C
e Peromyscus_maniculatus.KI615518.1                       4955125 0 -   8017169 C
e Perodicticus_potto.k141_1136815                           10207 0 +     61070 C
e Perodicticus_ibeanus.k141_117958                           9080 0 -     23713 C
e Otolemur_garnettii.GL873528.1                          18011493 0 -  38779656 C
e Otolemur_crassicaudatus.k141_505435                        3512 0 -     53940 C
e Onychomys_torridus.OnyTor_scaffold_12578                  42756 0 +     62360 C
e Ondatra_zibethicus.OndZib_scaffold_6821                  130071 0 +    145789 C
e Octodon_degus.JH651621.1                                3687420 1881 +  10294119 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65678347 0 +  89412551 C
e Nycticebus_coucang.k141_771591                            13545 0 +     16181 C
e Nycticebus_bengalensis.LG16                            65570136 0 -  95554990 C
e Nasalis_larvatus.k141_153429                              11264 0 +     48152 C
e Nannospalax_galili.KL201303.1                            119867 0 +    362372 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     91920 1922 -    117718 I
e Muscardinus_avellanarius.MusAve_scaffold_9643             14525 0 +     98495 C
e Mus_spretus.CM004110.1                                 74336277 0 +  97876770 C
e Mus_pahari.LT608305.1                                  67559927 0 +  89017189 C
e Mus_musculus.chr16                                     75493550 0 +  98207768 C
e Mus_caroli.LT608236.1                                  70771497 0 +  92629107 C
e Mirza_zaza.k141_593947                                     4089 0 -     12809 C
e Microcebus_murinus.CM007691.1                          16513035 0 +  47401472 C
e Mesocricetus_auratus.KB708139.1                         1051192 0 -  26018355 C
e Meriones_unguiculatus.MerUng_scaffold_52233               15570 0 +     15977 C
e Marmota_marmota.CZRN01000005.1                         36877588 0 +  64221397 C
e Loris_tardigradus.ctg97                                 3781302 0 +   6799190 C
e Loris_lydekkerianus.k141_550999                           13563 0 +     84689 C
e Lepilemur_septentrionalis.k141_710646                      1084 0 -     13103 C
e Lepilemur_ruficaudatus.k141_574529                        35037 0 -     38897 C
e Lepilemur_dorsalis.k141_134267                            56656 0 +     63517 C
e Lepilemur_ankaranensis.k141_884009                        27292 0 +     39228 C
e Lemur_catta.scaffold_1                                258409979 0 - 285822530 C
e Indri_indri.k141_2197838                                    116 0 +      3484 C
e Ictidomys_tridecemlineatus.JH393315.1                   7129728 0 +  13083262 C
e Hystrix_cristata.HysCri_scaffold_50788                     7688 1865 +     22540 I
e Heterocephalus_glaber.JH602058.1                        2560252 0 +  31725842 C
e Hapalemur_occidentalis.k141_797938                        48308 0 -     54384 C
e Hapalemur_meridionalis.k141_186231                        31681 0 -     42470 C
e Hapalemur_griseus.k141_1387522                             8432 0 +     56096 C
e Hapalemur_gilberti.k141_279011                             3105 0 -     11661 C
e Hapalemur_alaotrensis.k141_1280836                         4627 0 +     10286 C
e Graphiurus_murinus.GraMur_scaffold_4493                   79386 0 +    118900 C
e Galagoides_demidoff.k141_1769638                          13144 0 +     27357 C
e Galago_senegalensis.k141_964197                           16038 0 -     43889 C
e Galago_moholi.ctg555                                     213680 0 -    847004 C
e Fukomys_damarensis.KN123630.1                          13895732 0 -  19261668 C
e Eulemur_sanfordi.k141_186399                              18623 0 -     29447 C
e Eulemur_rufus.k141_1620292                                35891 0 +     46535 C
e Eulemur_rubriventer.k141_411740                           21157 0 +     26808 C
e Eulemur_mongoz.k141_825972                                18693 0 +     27497 C
e Eulemur_macaco.k141_747087                                 2027 0 -     19505 C
e Eulemur_fulvus.k141_653297                                14043 0 +    109717 C
e Eulemur_flavifrons.k141_903901                            10560 0 +     60246 C
e Eulemur_coronatus.k141_3240342                            14235 0 +     36558 C
e Eulemur_collaris.k141_1015201                              1102 0 -      4292 C
e Eulemur_albifrons.k141_715837                              7832 0 +     13586 C
e Ellobius_talpinus.LOJH01198462.1                           1213 0 -      1901 C
e Ellobius_lutescens.LOEQ01003611.1                        243471 0 -    369425 C
e Dolichotis_patagonum.DolPat_scaffold_14102                39604 0 -     73477 C
e Daubentonia_madagascariensis.ctg11                     16847687 0 +  31942871 C
e Dasyprocta_punctata.DasPun_flattened_line_634             61584 0 -    236241 C
e Cuniculus_paca.CunPac_flattened_line_16637                20446 0 +     26546 C
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 32592 1717 -     67205 I
e Ctenodactylus_gundi.CteGun_scaffold_447                  213664 0 -    956709 C
e Cricetulus_griseus.LT883672.1                          53034667 0 +  72327488 C
e Cricetomys_gambianus.CriGam_scaffold_949                 282297 0 -    399297 C
e Colobus_polykomos.k141_1406057                            19335 0 +     23629 C
e Colobus_guereza.LG08                                  147667351 0 + 156195979 C
e Colobus_angolensis.KN985967.1                          10889423 0 +  10971483 C
e Chinchilla_lanigera.JH721867.1                         15963245 964 +  43084221 I
e Cheirogaleus_medius.k141_133808                           10871 0 +     13308 C
e Cheirogaleus_major.k141_1157592                           61827 0 -     68416 C
e Cephalopachus_bancanus.k141_702587                         8788 3391 +     21754 I
e Cavia_tschudii.CavTsc_scaffold_488                       177725 1742 +    436027 I
e Cavia_porcellus.DS562889.1                             15799553 1742 -  24440124 I
e Cavia_aperea.AVPZ01000278.1                            15787615 1741 -  24422027 I
e Carlito_syrichta.NW_007248099.1                          309764 3411 +    345090 I
e Avahi_peyrierasi.k141_798820                               3156 0 +      6337 C
e Avahi_laniger.k141_2840928                                 9540 0 -     16375 C
e Arctocebus_calabarensis.k141_587554                        4710 0 +      9265 C
e Acomys_cahirinus.AcoCah_scaffold_1625                    117433 0 -    189883 C
e Pan_paniscus.CM003386.1                               127578173 0 - 205426864 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               17121 1 +    209709 G
s Allenopithecus_nigroviridis.k141_2469532                   4984 1 -     60446 g
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         5701 1 -     29318 g
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         4639 1 +     38766 g
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          5595 1 -     80423 g
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_165776                             17290 1 +     19426 T
i Alouatta_belzebul.k141_165776                         I 309 n 1
s Alouatta_caraya.k141_664908                                2537 1 -     12443 t
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_307735                               193 1 -      3214 T
i Alouatta_discolor.k141_307735                         n 1 n 1
s Alouatta_juara.k141_1268583                               10473 1 -     10533 A
i Alouatta_juara.k141_1268583                           C 0 I 1
s Alouatta_macconnelli.k141_2318944                          2625 1 -     24210 T
i Alouatta_macconnelli.k141_2318944                     I 289 C 0
s Alouatta_nigerrima.k141_2187093                           29207 1 -     30219 T
i Alouatta_nigerrima.k141_2187093                       I 289 C 0
s Alouatta_palliata.k141_2378775                              967 1 +      5328 t
i Alouatta_palliata.k141_2378775                        C 0 C 0
s Alouatta_puruensis.k141_398195                            45108 1 +     45367 t
i Alouatta_puruensis.k141_398195                        C 0 I 255
s Alouatta_seniculus.k141_790278                             4319 1 -      9835 A
i Alouatta_seniculus.k141_790278                        C 0 I 1
s Aotus_azarae.k141_3170768                                 65935 1 +     78111 g
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            8881 1 +     22701 g
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5752839 1 +   9889416 G
i Aotus_nancymaae.KZ196176.1                            I 3 C 0
s Aotus_trivirgatus.k141_1740727                             9437 1 -    104377 g
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               9444 1 +     23246 g
i Aotus_vociferans.k141_718647                          C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9542728 1 +  39197703 g
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             64001 1 +     85812 g
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                15014 1 +     89302 g
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             19515 1 -     58268 g
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             67509 1 +    119057 g
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               9478 1 -     25888 g
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Cacajao_ayresi.k141_724503                               117384 1 -    171031 g
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 16404 1 +    125063 g
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                18451 1 -    216513 g
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       10994 1 -    134917 g
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Cebus_albifrons.Contig22                               18894216 1 -  29618158 g
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                11760 1 -     26817 g
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                16003 1 +     25043 g
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cercocebus_atys.KQ010443.1                              6558925 1 +   6739814 G
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      30402 1 +     60454 g
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          5606 1 -     21101 g
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         62916 1 -    107033 g
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        5778 1 -     17608 g
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          2942 1 +     45019 g
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           3008 1 +     15177 g
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          5826 1 +     16677 g
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           28014 1 +     35983 g
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11994545 1 +  12117833 g
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46481306 1 +  46592721 g
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      44857 1 -     45581 g
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       5838 1 +     35577 g
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        5632 1 -     25661 g
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        5590 1 -     17744 g
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        25175 1 +     37128 g
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Cheracebus_lucifer.k141_619653                             9041 1 -     18223 G
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                               780 1 +    188999 G
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           45079 1 +     57117 G
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          49758 1 +     54541 G
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chiropotes_israelita.k141_1189915                         74563 1 +    196370 g
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          18744 1 +     40510 g
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15143359 1 -  15256731 g
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      37823 1 -     53260 g
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101148382 1 + 101219884 G
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Erythrocebus_patas.Contig8                             48780393 1 -  48907691 g
i Erythrocebus_patas.Contig8                            C 0 C 0
s Gorilla_beringei.k141_111300                               8836 1 -     14630 g
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119655936 1 - 195582420 g
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Hoolock_leuconedys.ctg649                                   108466 1 +    115816 g
i Hoolock_leuconedys.ctg649                                C 0 C 0
s Hylobates_abbotti.k141_1816750                             1294 1 +      3202 g
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1633646                              1264 1 -      2102 g
i Hylobates_agilis.k141_1633646                         C 0 C 0
s Hylobates_klossii.k141_468230                              2780 1 +      5464 g
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14628129 1 -  25970782 g
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                             680 1 +      4161 g
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Lagothrix_lagothricha.k141_12968                          53597 1 -    147782 g
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lophocebus_aterrimus.ctg55                             19252013 1 +  19376315 g
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Macaca_arctoides.k141_2201161                             23764 1 +     74745 g
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12710225 1 +  12821369 g
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                2799 1 -     26467 g
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           50670 1 +     63263 g
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 2780 1 -     26361 g
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 5970 1 -      7381 g
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  49195 1 -     79256 g
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196039297 1 + 196197964 G
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11449463 1 +  11645122 G
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   8149 1 -     46448 g
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                5815 1 -     13212 g
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 19492 1 -     55006 g
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43844611 1 +  43892939 g
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               20779 1 -     24607 g
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               8146 1 -     27140 g
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43441186 1 -  43563597 g
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4453990 1 -   4543643 g
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         5732 1 +     29742 g
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Nomascus_annamensis.k141_1817463                            420 1 -      1070 g
i Nomascus_annamensis.k141_1817463                      C 0 C 0
s Nomascus_concolor.k141_70405                                420 1 +      1153 g
i Nomascus_concolor.k141_70405                          C 0 C 0
s Nomascus_gabriellae.k141_1400361                            355 1 -      2203 g
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_1022                             378 1 -     11638 g
i Nomascus_siki_b.tarseq_1022                       C 0 C 0
s Nomascus_siki_a.k141_421408                                   265 1 +     16235 G
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Pan_troglodytes.KZ622857.1                               332881 1 +    772158 G
i Pan_troglodytes.KZ622857.1                            C 0 C 0
s Papio_anubis.CM001492.2                               188159975 1 - 188283584 G
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              3065 1 +     25005 g
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47517347 1 +  47705337 g
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 71338 1 -    104429 g
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    9870 1 +     14967 g
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 5735 1 -      7628 g
i Papio_ursinus.k141_1345919                            C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       25690 1 +     44506 g
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        25903 1 +     67491 g
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      16142 1 -     98129 g
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     25742 1 +    147771 g
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         2378 1 -     43940 g
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          6461 1 -     55515 g
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         25815 1 +    152463 g
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       3623 1 -    119457 g
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         15538 1 +    134592 g
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          26125 1 -     75465 g
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              190713 1 -    373494 A
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19811360 1 +  19899266 a
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15676148 1 -  43202129 G
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        8061 1 +     34089 g
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              8003 1 -     60842 g
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              8096 1 +     67014 g
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              8074 1 +     60816 g
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 8011 1 -     76454 g
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17344802 1 -  30362882 g
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         24123 1 -     62485 g
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        18387 1 -  13920577 g
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Theropithecus_gelada.CM009951.1                       194011508 1 - 194193292 G
i Theropithecus_gelada.CM009951.1                       C 0 C 0
e Eptesicus_fuscus.JH977687.1                             4708429 237 +   6522550 I
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Petromus_typicus.PetTyp_scaffold_33007                    16921 0 -     36578 C
e Sorex_araneus.JH798170.1                               17769647 0 -  27805282 C
e Dinomys_branickii.DinBra_scaffold_1996                   158442 1030 +    228994 I
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           4051 456 -      6963 I
e Oryctolagus_cuniculus.CM000803.1                      141878516 2929 + 163896628 I
e Ochotona_princeps.JH802095.1                            4996729 2205 -  23139505 I
e Lepus_americanus.LepAme_scaffold_62849                    15480 2946 +     22452 I
e Perognathus_longimembris.PerPac_flattened_line_19359       1614 38 +     49596 I
e Dipodomys_stephensi.DipSte_scaffold_84338                  1789 28 -     11986 I
e Dipodomys_ordii.KN672545.1                              3659429 30 +   4240102 I
e Suricata_suricatta.SurSur_flattened_line_20339            32401 0 +     62062 C
e Ziphius_cavirostris.ZipCav_flattened_line_60625            1538 2 -     13665 I
e Zalophus_californianus.ZalCal_flattened_line_4097        219280 0 -    227762 C
e Vulpes_lagopus.VulLag_flattened_line_2045                143835 0 -    281493 C
e Vicugna_pacos.KN269600.1                                1527832 0 -   2331223 C
e Ursus_maritimus.KK498671.1                              6519892 0 +  28682327 C
e Uropsilus_gracilis.UroGra_scaffold_69449                   9768 0 +     10241 C
e Tursiops_truncatus.MRVK01000923.1                      69316794 2 -  96451834 I
e Trichechus_manatus.JH594618.1                          16088878 0 +  31416278 C
e Tragulus_javanicus.TraJav_scaffold_14717                   9149 2 +     90398 I
e Tonatia_saurophila.TonSau_scaffold_3334                  137563 275 -    259118 I
e Tapirus_terrestris.TapTer_scaffold_14939                  61041 0 +     99546 C
e Tapirus_indicus.TapInd_scaffold_176                      810399 0 +   1148477 C
e Tamandua_tetradactyla.TamTet_scaffold_26877               16259 379 +     45698 I
e Tadarida_brasiliensis.TadBra_scaffold_61492                1822 242 +     20549 I
e Sus_scrofa.CM000824.4                                 189273670 1086 + 218635234 I
e Spilogale_gracilis.SpiGra_flattened_line_905             238244 0 -    276980 C
e Solenodon_paradoxus.SolPar_flattened_line_1012            23185 0 +    739146 C
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   39231 0 -    114521 C
e Saiga_tatarica.SaiTat_scaffold_1069354                      105 0 -       709 C
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Rhinolophus_sinicus.LVEH01000179.1                      1792212 2 +   2252614 I
e Rangifer_tarandus.RanTarSib_scaffold_24239                20109 0 +     68503 C
e Puma_concolor.QAVW01000427.1                          131539433 0 - 161321710 C
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Pteronura_brasiliensis.PteBra_flattened_line_1343        249686 0 -    344369 C
e Pteronotus_parnellii.KE867983.1                            5588 252 -     27784 I
e Procavia_capensis.ProCapCap_scaffold_11797                50321 0 -     88779 C
e Platanista_gangetica.PlaMin_flattened_line_72990           8998 2 +     21690 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Phocoena_phocoena.PhoPho_flattened_line_53071              2530 2 +      8220 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    120818 0 -    135482 C
e Pantholops_hodgsonii.KE114631.1                         1071126 0 -   1292953 C
e Panthera_tigris.KE721879.1                              5032785 0 -   6340057 C
e Panthera_pardus.KV860323.1                              3643137 0 +  18214204 C
e Panthera_onca.PanOnc_flattened_line_1615                  39322 0 +    295523 C
e Ovis_canadensis.OviCan_scaffold_6251                      83485 0 +    140051 C
e Ovis_aries.CM001582.2                                 134082257 0 - 275406953 C
e Otocyon_megalotis.JAEUCK010005121.1                      314612 0 -    505867 C
e Orycteropus_afer.OryAfe_flattened_line_13509              63439 0 -     66828 C
e Orcinus_orca.KB316965.1                                 7228065 2 -   7562323 I
e Okapia_johnstoni.LVCL01S0017931.1                         41334 0 +     78940 C
e Odocoileus_virginianus.KZ101650.1                       1083245 0 +   1425656 C
e Odobenus_rosmarus.KB229369.1                             684428 0 -   3126709 C
e Nyctereutes_procyonoides.CAJHUB010000786.1                37467 0 +   3668941 C
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Neophocaena_asiaeorientalis.KZ688543.1                  3954389 2 -   4490290 I
e Neomonachus_schauinslandi.NINY01007774.1                4489721 0 -  14209539 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             6589 379 -      8794 I
e Myotis_myotis.MyoMyo_scaffold_6123                        13515 236 +     66751 I
e Myotis_lucifugus.GL429887.1                             3468272 238 -   3747815 I
e Myotis_davidii.KB114863.1                               5022194 233 +   6462685 I
e Myotis_brandtii.KE161952.1                               970769 237 +   8389877 I
e Mustela_putorius.JH417978.1                             4427567 0 -  28371801 C
e Murina_feae.MurFea_scaffold_2254                          23900 236 -    100666 I
e Mungos_mungo.MunMun_flattened_line_8729                  149746 0 -    168139 C
e Moschus_moschiferus.MosMos_scaffold_78805                  5813 0 -     19904 C
e Mormoops_blainvillei.MorMeg_scaffold_2952                162937 259 +    265003 I
e Monodon_monoceros.MonMon_M_scaffold_5598                 149798 2 +    154973 I
e Mirounga_angustirostris.MirAng_flattened_line_8852        16322 0 -    104932 C
e Miniopterus_schreibersii.MinSch_scaffold_24116            36998 214 +     45743 I
e Miniopterus_natalensis.LDJU01000022.1                   8212509 213 +  10048721 I
e Micronycteris_hirsuta.MicHir_scaffold_37978               24387 274 -     32043 I
e Microgale_talazaci.MicTal_scaffold_34660                  40768 0 -     48017 C
e Mesoplodon_bidens.MesBid_scaffold_96348                    2003 2 -     12939 I
e Mellivora_capensis.MelCap_flattened_line_15433             5726 0 -     87323 C
e Megaderma_lyra.MegLyr_scaffold_3562                       65026 2 -    234502 I
e Manis_pentadactyla.KN017078.1                             39380 0 +     58827 C
e Manis_javanica.JSZB01003966.1                            149232 0 +    252755 C
e Lycaon_pictus.CM007556.1                               11094608 0 +  39895028 C
e Loxodonta_africana.GL010040.1                          20597894 0 -  62548349 C
e Lipotes_vexillifer.KE558548.1                            139369 2 +   3060487 I
e Leptonychotes_weddellii.KB714749.1                      3090826 0 -   3498232 C
e Lasiurus_borealis.LasBor_scaffold_59542                    5042 241 +     26176 I
e Kogia_breviceps.KogBre_flattened_line_35920               26998 2 +     37189 I
e Inia_geoffrensis.IniGeo_flattened_line_66725              12417 2 +     17520 I
e Hyaena_hyaena.HyaHya_flattened_line_20729                 22640 0 -     67322 C
e Hipposideros_galeritus.HipGal_scaffold_52959                377 2 +     26078 I
e Hipposideros_armiger.JXIK01001085.1                      282608 2 -    477199 I
e Hippopotamus_amphibius.HipAmp_scaffold_1308              150208 0 +    277961 C
e Heterohyrax_brucei.HetBruBak_scaffold_13814               68359 0 -    108006 C
e Hemitragus_hylocrius.HemHyl_scaffold_16669                32467 0 -     91191 C
e Helogale_parvula.HelPar_flattened_line_22962              22066 0 +     53719 C
e Giraffa_tippelskirchi.LVKQ01S012154.1                    185599 0 -    189561 C
e Felis_nigripes.FelNig_flattened_line_8080                 26394 0 +     52776 C
e Felis_catus_fca126.CM031420.1                         129285299 0 - 158578461 C
e Eubalaena_japonica.EubJap_flattened_line_7756             64881 0 +     89355 C
e Eschrichtius_robustus.EscRob_flattened_line_685          318424 0 +    330699 C
e Equus_przewalskii.ATBW01073585.1                          16166 0 +     92910 C
e Equus_caballus.CM000402.2                              13354676 0 +  41866177 C
e Equus_asinus.JREZ01000062.1                             5856176 0 -   7175178 C
e Enhydra_lutris.KZ291749.1                              85876835 0 +  99434291 C
e Elephantulus_edwardii.JH947210.1                        7830035 1277 +  15467074 I
e Elaphurus_davidianus.JRFZ01086400.1                     1495795 0 +   1727528 C
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Echinops_telfairi.JH980316.1                           22999931 2 -  44670279 I
e Diceros_bicornis.DicBicMic_scaffold_9545                   6452 0 +    151128 C
e Dicerorhinus_sumatrensis.PEKH010003161.1                 325812 0 +    993696 C
e Desmodus_rotundus.KZ672188.1                           18700517 262 -  18957592 I
e Delphinapterus_leucas.KZ290064.1                       80040207 0 -  96802777 C
e Dasypus_novemcinctus.JH568778.1                          185121 383 -   6883506 I
e Cryptoprocta_ferox.CryFer_flattened_line_19014            56919 0 -     70449 C
e Crocidura_indochinensis.CroInd_scaffold_27484              1226 0 -     22648 C
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1337 2 -      5782 I
e Condylura_cristata.JH655880.1                          60621791 0 +  78930452 C
e Choloepus_hoffmanni.KN194586.1                           763329 503 +    964067 I
e Choloepus_didactylus.ChoDid_scaffold_36182                18024 504 -     21363 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_160623         6920 0 -      9338 C
e Catagonus_wagneri.CatWag_scaffold_1305                   162277 0 -    276539 C
e Carollia_perspicillata.CarPer_scaffold_4436               61226 261 +     67245 I
e Capra_hircus.CM004562.1                               135711414 0 - 157403528 C
e Capra_aegagrus.CM003214.1                              21330197 0 + 157394656 C
e Canis_lupus_orion.HG994411.1                           16461937 0 -  44759192 C
e Canis_lupus_familiaris.chr31                           11095152 0 +  39895921 C
e Canis_lupus_dingo.QKWQ01001993.1                       11272441 0 -  35597290 C
e Canis_lupus_VD.CanFam_VD_scaffold_16982                   20732 0 +     87036 C
e CanFam4.chr31                                          11525758 0 +  39901454 C
e Camelus_ferus.KB016973.1                                2976160 0 +   6889770 C
e Camelus_dromedarius.KN271192.1                           400424 0 -  15254737 C
e Camelus_bactrianus.KN276303.1                           3222722 0 -   8989139 C
e Bubalus_bubalis.KI419065.1                               674242 0 +   1914593 C
e Bos_taurus.CM000177.6                                  22664479 0 + 158972876 C
e Bos_mutus.JH883513.1                                     418090 0 +    998990 C
e Bos_indicus.CM003021.1                                 22955825 0 + 161108492 C
e Bison_bison.KN264915.1                                   301727 0 -   6870073 C
e Beatragus_hunteri.BeaHun_scaffold_21644                   47579 0 -     72089 C
e Balaenoptera_bonaerensis.DF502048.1                        8754 0 -     13118 C
e Balaenoptera_acutorostrata.KI537095.1                  26383581 0 +  51448160 C
e Artibeus_jamaicensis.ArtJam_scaffold_41619                10440 261 -     29036 I
e Antilocapra_americana.AntAmePen_scaffold_27338             2548 0 +     55446 C
e Anoura_caudifer.AnoCau_scaffold_422                      392020 257 -    631301 I
e Ammotragus_lervia.NIVO01013474.1                        3525117 0 +   4113121 C
e Ailurus_fulgens.LNAC01000003.1                          7099380 0 -  16596857 C
e Ailuropoda_melanoleuca.LNAT01000321.1                  10662594 0 +  23371972 C
e Acinonyx_jubatus.LLWD01000356.1                         2038912 0 +   3721120 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           20901 0 -    119109 C
e Glis_glis.GliGli_scaffold_79770                           15993 0 -     18683 C
e Zapus_hudsonius.ZapHud_scaffold_64392                     20218 0 -     20485 C
e Jaculus_jaculus.JH725517.1                              8577088 0 +  11848649 C
e Hylobates_pileatus_a.tarseq_592                             35773 13 -     60944 I
e Allactaga_bullata.AllBul_scaffold_70162                   21404 0 -     22067 C
e Galeopterus_variegatus.GalVar_scaffold_354               159184 0 +    324696 C
e Microtus_ochrogaster.CM001673.1                        22823881 0 -  98408828 C
e Xerus_inauris.XerIna_scaffold_7898                       128400 2868 -    134049 I
e Varecia_variegata.k141_775891                             27530 0 -     33872 C
e Varecia_rubra.k141_432109                                  7995 0 -     20643 C
e Tupaia_tana.TupTan_flattened_line_68454                    9338 0 +     13056 C
e Tupaia_chinensis.KB320831.1                             2797404 0 -   3938065 C
e Trachypithecus_pileatus.k141_1022309                       5226 0 +     13828 C
e Trachypithecus_phayrei.ctg3                            44662914 0 -  44834318 C
e Trachypithecus_obscurus.k141_1115109                       8130 0 -     28054 C
e Trachypithecus_melamera.k141_699241                        2986 0 -     24393 C
e Trachypithecus_leucocephalus.k141_381681                   3005 0 +     12481 C
e Trachypithecus_laotum.k141_760702                          4719 0 +     14371 C
e Trachypithecus_hatinhensis.k141_504423                     6067 0 -     15592 C
e Trachypithecus_germaini.k141_868450                        3883 0 -     11566 C
e Trachypithecus_geei.k141_670367                           46082 0 -     54611 C
e Trachypithecus_francoisi.k141_768164                       4689 0 -     14244 C
e Trachypithecus_cristatus.k141_1011511                      5261 0 -     12939 C
e Trachypithecus_crepusculus.k141_1588528                   23360 0 -     32910 C
e Trachypithecus_auratus.k141_738098                        29800 0 +     38948 C
e Tarsius_wallacei.k141_48636                               60532 3805 +     65473 I
e Tarsius_lariang.k141_609102                               27216 3812 +     42269 I
e Spermophilus_dauricus.KZ294190.1                        2243603 0 +   2842873 C
e Sigmodon_hispidus.SigHis_scaffold_11332                  104689 0 -    120886 C
e Semnopithecus_vetulus.k141_1143185                        16479 0 +     30600 C
e Semnopithecus_schistaceus.k141_387461                     33457 0 +     42640 C
e Semnopithecus_priam.k141_410937                           40312 0 +     46263 C
e Semnopithecus_johnii.k141_785014                         121532 0 +    130994 C
e Semnopithecus_hypoleucos.k141_761524                      11528 0 +     20762 C
e Semnopithecus_entellus.k141_1572367                        6153 0 +     15331 C
e Rhinopithecus_strykeri.ctg4                            44859307 0 -  45163003 C
e Rhinopithecus_bieti.k119_554384                            2917 0 -     17045 C
e Rattus_norvegicus.chr11                                13917336 0 +  90463843 C
e Pygathrix_nigripes_a.k141_101123                             8537 0 +     18040 C
e Pygathrix_nigripes_b.ctg79                                 6809148 0 +   6970761 C
e Pygathrix_cinerea.k141_374971                             32651 0 +     56732 C
e Psammomys_obesus.NESX01026517.1                           37921 0 +     77221 C
e Propithecus_verreauxi.k141_158021                         42002 0 -     48185 C
e Propithecus_tattersalli.k141_907138                       19738 0 -     53241 C
e Propithecus_perrieri.k141_7554                            20103 0 +     27322 C
e Propithecus_edwardsi.k141_1317105                         38180 0 -     44753 C
e Propithecus_diadema.k141_577245                           45793 0 +     52369 C
e Propithecus_coronatus.k141_1353159                         6446 0 +     11805 C
e Propithecus_coquerelli.NW_012147863.1                     20390 0 -     30946 C
e Prolemur_simus.MPIZ01000048.1                           6851355 0 +  12164890 C
e Presbytis_mitrata.k141_860013                              8661 0 +     14865 C
e Presbytis_comata.k141_672698                               8546 0 -     15069 C
e Pithecia_vanzolinii.k141_831006                           15424 0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514 0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521 0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292 0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093 0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038 0 +     78826 C
e Pithecia_albicans.k141_991845                             45662 0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000036.1               26743271 0 +  26888534 C
e Piliocolobus_kirkii.k141_929665                            4788 0 +      7694 C
e Piliocolobus_gordonorum.k141_1270531                       5421 0 -     17985 C
e Piliocolobus_badius.k141_1987485                           4802 0 -      5908 C
e Peromyscus_maniculatus.KI615518.1                       4955125 0 -   8017169 C
e Perodicticus_potto.k141_1136815                           10207 0 +     61070 C
e Perodicticus_ibeanus.k141_117958                           9080 0 -     23713 C
e Otolemur_garnettii.GL873528.1                          18011493 0 -  38779656 C
e Otolemur_crassicaudatus.k141_505435                        3512 0 -     53940 C
e Onychomys_torridus.OnyTor_scaffold_12578                  42756 0 +     62360 C
e Ondatra_zibethicus.OndZib_scaffold_6821                  130071 0 +    145789 C
e Octodon_degus.JH651621.1                                3687420 1881 +  10294119 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65678347 0 +  89412551 C
e Nycticebus_coucang.k141_771591                            13545 0 +     16181 C
e Nycticebus_bengalensis.LG16                            65570136 0 -  95554990 C
e Nasalis_larvatus.k141_153429                              11264 0 +     48152 C
e Nannospalax_galili.KL201303.1                            119867 0 +    362372 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     91920 1922 -    117718 I
e Muscardinus_avellanarius.MusAve_scaffold_9643             14525 0 +     98495 C
e Mus_spretus.CM004110.1                                 74336277 0 +  97876770 C
e Mus_pahari.LT608305.1                                  67559927 0 +  89017189 C
e Mus_musculus.chr16                                     75493550 0 +  98207768 C
e Mus_caroli.LT608236.1                                  70771497 0 +  92629107 C
e Mirza_zaza.k141_593947                                     4089 0 -     12809 C
e Microcebus_murinus.CM007691.1                          16513035 0 +  47401472 C
e Mesocricetus_auratus.KB708139.1                         1051192 0 -  26018355 C
e Meriones_unguiculatus.MerUng_scaffold_52233               15570 0 +     15977 C
e Marmota_marmota.CZRN01000005.1                         36877588 0 +  64221397 C
e Loris_tardigradus.ctg97                                 3781302 0 +   6799190 C
e Loris_lydekkerianus.k141_550999                           13563 0 +     84689 C
e Lepilemur_septentrionalis.k141_710646                      1084 0 -     13103 C
e Lepilemur_ruficaudatus.k141_574529                        35037 0 -     38897 C
e Lepilemur_dorsalis.k141_134267                            56656 0 +     63517 C
e Lepilemur_ankaranensis.k141_884009                        27292 0 +     39228 C
e Lemur_catta.scaffold_1                                258409979 0 - 285822530 C
e Indri_indri.k141_2197838                                    116 0 +      3484 C
e Ictidomys_tridecemlineatus.JH393315.1                   7129728 0 +  13083262 C
e Hystrix_cristata.HysCri_scaffold_50788                     7688 1865 +     22540 I
e Heterocephalus_glaber.JH602058.1                        2560252 0 +  31725842 C
e Hapalemur_occidentalis.k141_797938                        48308 0 -     54384 C
e Hapalemur_meridionalis.k141_186231                        31681 0 -     42470 C
e Hapalemur_griseus.k141_1387522                             8432 0 +     56096 C
e Hapalemur_gilberti.k141_279011                             3105 0 -     11661 C
e Hapalemur_alaotrensis.k141_1280836                         4627 0 +     10286 C
e Graphiurus_murinus.GraMur_scaffold_4493                   79386 0 +    118900 C
e Galagoides_demidoff.k141_1769638                          13144 0 +     27357 C
e Galago_senegalensis.k141_964197                           16038 0 -     43889 C
e Galago_moholi.ctg555                                     213680 0 -    847004 C
e Fukomys_damarensis.KN123630.1                          13895732 0 -  19261668 C
e Eulemur_sanfordi.k141_186399                              18623 0 -     29447 C
e Eulemur_rufus.k141_1620292                                35891 0 +     46535 C
e Eulemur_rubriventer.k141_411740                           21157 0 +     26808 C
e Eulemur_mongoz.k141_825972                                18693 0 +     27497 C
e Eulemur_macaco.k141_747087                                 2027 0 -     19505 C
e Eulemur_fulvus.k141_653297                                14043 0 +    109717 C
e Eulemur_flavifrons.k141_903901                            10560 0 +     60246 C
e Eulemur_coronatus.k141_3240342                            14235 0 +     36558 C
e Eulemur_collaris.k141_1015201                              1102 0 -      4292 C
e Eulemur_albifrons.k141_715837                              7832 0 +     13586 C
e Ellobius_talpinus.LOJH01198462.1                           1213 0 -      1901 C
e Ellobius_lutescens.LOEQ01003611.1                        243471 0 -    369425 C
e Dolichotis_patagonum.DolPat_scaffold_14102                39604 0 -     73477 C
e Daubentonia_madagascariensis.ctg11                     16847687 0 +  31942871 C
e Dasyprocta_punctata.DasPun_flattened_line_634             61584 0 -    236241 C
e Cuniculus_paca.CunPac_flattened_line_16637                20446 0 +     26546 C
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 32592 1717 -     67205 I
e Ctenodactylus_gundi.CteGun_scaffold_447                  213664 0 -    956709 C
e Cricetulus_griseus.LT883672.1                          53034667 0 +  72327488 C
e Cricetomys_gambianus.CriGam_scaffold_949                 282297 0 -    399297 C
e Colobus_polykomos.k141_1406057                            19335 0 +     23629 C
e Colobus_guereza.LG08                                  147667351 0 + 156195979 C
e Colobus_angolensis.KN985967.1                          10889423 0 +  10971483 C
e Chinchilla_lanigera.JH721867.1                         15963245 964 +  43084221 I
e Cheirogaleus_medius.k141_133808                           10871 0 +     13308 C
e Cheirogaleus_major.k141_1157592                           61827 0 -     68416 C
e Cephalopachus_bancanus.k141_702587                         8788 3391 +     21754 I
e Cavia_tschudii.CavTsc_scaffold_488                       177725 1742 +    436027 I
e Cavia_porcellus.DS562889.1                             15799553 1742 -  24440124 I
e Cavia_aperea.AVPZ01000278.1                            15787615 1741 -  24422027 I
e Carlito_syrichta.NW_007248099.1                          309764 3411 +    345090 I
e Avahi_peyrierasi.k141_798820                               3156 0 +      6337 C
e Avahi_laniger.k141_2840928                                 9540 0 -     16375 C
e Arctocebus_calabarensis.k141_587554                        4710 0 +      9265 C
e Acomys_cahirinus.AcoCah_scaffold_1625                    117433 0 -    189883 C
e Pan_paniscus.CM003386.1                               127578173 0 - 205426864 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               17122 2 +    209709 TT
s Allenopithecus_nigroviridis.k141_2469532                   4985 2 -     60446 tt
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         5702 2 -     29318 tt
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         4640 2 +     38766 tt
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          5596 2 -     80423 tt
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_3793077                            38887 2 +     40571 tt
i Alouatta_belzebul.k141_3793077                        I 1 N 0
s Alouatta_caraya.k141_664908                                2538 2 -     12443 tt
i Alouatta_caraya.k141_664908                           C 0 I 305
s Alouatta_discolor.k141_2476351                             2573 2 +     41985 tt
i Alouatta_discolor.k141_2476351                        I 1 N 0
s Alouatta_juara.k141_1268583                               10475 2 -     10533 TT
i Alouatta_juara.k141_1268583                           I 1 C 0
s Alouatta_macconnelli.k141_2318944                          2626 2 -     24210 TT
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           29208 2 -     30219 TT
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_2378775                              968 2 +      5328 tt
i Alouatta_palliata.k141_2378775                        C 0 N 0
s Alouatta_puruensis.k141_398195                            45364 2 +     45367 tt
i Alouatta_puruensis.k141_398195                        I 255 N 0
s Alouatta_seniculus.k141_790278                             4321 2 -      9835 TT
i Alouatta_seniculus.k141_790278                        I 1 C 0
s Aotus_azarae.k141_3170768                                 65936 2 +     78111 tt
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            8882 2 +     22701 tc
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5752840 2 +   9889416 TC
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             9438 2 -    104377 tc
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               9445 2 +     23246 tc
i Aotus_vociferans.k141_718647                          C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9542729 2 +  39197703 tt
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             64002 2 +     85812 tt
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                15015 2 +     89302 tt
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             19516 2 -     58268 tt
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             67510 2 +    119057 tt
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               9479 2 -     25888 tt
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Cacajao_ayresi.k141_724503                               117385 2 -    171031 tt
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 16405 2 +    125063 tt
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                18452 2 -    216513 tt
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       10995 2 -    134917 tt
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Cebus_albifrons.Contig22                               18894217 2 -  29618158 tt
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                11761 2 -     26817 tt
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                16004 2 +     25043 tt
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cercocebus_atys.KQ010443.1                              6558926 2 +   6739814 TT
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      30403 2 +     60454 tt
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          5607 2 -     21101 tt
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         62917 2 -    107033 tt
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        5779 2 -     17608 tt
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          2943 2 +     45019 tt
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           3009 2 +     15177 tt
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          5827 2 +     16677 tt
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           28015 2 +     35983 tt
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11994546 2 +  12117833 tt
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46481307 2 +  46592721 tt
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      44858 2 -     45581 tt
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       5839 2 +     35577 tt
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        5633 2 -     25661 tt
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        5591 2 -     17744 tt
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        25176 2 +     37128 tt
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Cheracebus_lucifer.k141_619653                             9042 2 -     18223 TT
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                               781 2 +    188999 TT
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           45080 2 +     57117 TT
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          49759 2 +     54541 TT
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chiropotes_israelita.k141_1189915                         74564 2 +    196370 tt
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          18745 2 +     40510 tt
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15143360 2 -  15256731 tt
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      37824 2 -     53260 tt
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101148383 2 + 101219884 TT
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Erythrocebus_patas.Contig8                             48780394 2 -  48907691 tt
i Erythrocebus_patas.Contig8                            C 0 C 0
s Gorilla_beringei.k141_111300                               8837 2 -     14630 tt
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119655937 2 - 195582420 tt
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Hoolock_leuconedys.ctg649                                   108467 2 +    115816 tt
i Hoolock_leuconedys.ctg649                                C 0 C 0
s Hylobates_abbotti.k141_1816750                             1295 2 +      3202 tt
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1633646                              1265 2 -      2102 tt
i Hylobates_agilis.k141_1633646                         C 0 C 0
s Hylobates_klossii.k141_468230                              2781 2 +      5464 tt
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14628130 2 -  25970782 tt
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                             681 2 +      4161 tt
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Lagothrix_lagothricha.k141_12968                          53598 2 -    147782 tt
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lophocebus_aterrimus.ctg55                             19252014 2 +  19376315 tt
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Macaca_arctoides.k141_2201161                             23765 2 +     74745 tt
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12710226 2 +  12821369 tt
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                2800 2 -     26467 tt
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           50671 2 +     63263 tt
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 2781 2 -     26361 tt
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 5971 2 -      7381 tt
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  49196 2 -     79256 tt
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196039298 2 + 196197964 TT
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11449464 2 +  11645122 TT
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   8150 2 -     46448 tt
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                5816 2 -     13212 tt
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 19493 2 -     55006 tt
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43844612 2 +  43892939 tt
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               20780 2 -     24607 tt
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               8147 2 -     27140 tt
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43441187 2 -  43563597 tt
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4453991 2 -   4543643 tt
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         5733 2 +     29742 tt
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Nomascus_annamensis.k141_1817463                            421 2 -      1070 tt
i Nomascus_annamensis.k141_1817463                      C 0 C 0
s Nomascus_concolor.k141_70405                                421 2 +      1153 tt
i Nomascus_concolor.k141_70405                          C 0 C 0
s Nomascus_gabriellae.k141_1400361                            356 2 -      2203 tt
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_1022                             379 2 -     11638 tt
i Nomascus_siki_b.tarseq_1022                       C 0 I 37
s Nomascus_siki_a.k141_421408                                   266 2 +     16235 TT
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Pan_troglodytes.KZ622857.1                               332882 2 +    772158 TT
i Pan_troglodytes.KZ622857.1                            C 0 I 41
s Papio_anubis.CM001492.2                               188159976 2 - 188283584 TT
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              3066 2 +     25005 tt
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47517348 2 +  47705337 tt
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 71339 2 -    104429 tt
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    9871 2 +     14967 tt
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 5736 2 -      7628 tt
i Papio_ursinus.k141_1345919                            C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       25691 2 +     44506 tt
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        25904 2 +     67491 tt
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      16143 2 -     98129 tt
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     25743 2 +    147771 tt
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         2379 2 -     43940 tt
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          6462 2 -     55515 tt
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         25816 2 +    152463 tt
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       3624 2 -    119457 tt
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         15539 2 +    134592 tt
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          26126 2 -     75465 tt
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              190714 2 -    373494 TT
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19811361 2 +  19899266 tt
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15676149 2 -  43202129 TT
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        8062 2 +     34089 tt
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              8004 2 -     60842 tt
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              8097 2 +     67014 tt
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              8075 2 +     60816 tt
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 8012 2 -     76454 tt
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17344803 2 -  30362882 tt
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         24124 2 -     62485 tt
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        18388 2 -  13920577 tt
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Theropithecus_gelada.CM009951.1                       194011509 2 - 194193292 TT
i Theropithecus_gelada.CM009951.1                       C 0 C 0
e Eptesicus_fuscus.JH977687.1                             4708429 237 +   6522550 I
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Petromus_typicus.PetTyp_scaffold_33007                    16921 0 -     36578 C
e Sorex_araneus.JH798170.1                               17769647 0 -  27805282 C
e Dinomys_branickii.DinBra_scaffold_1996                   158442 1030 +    228994 I
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           4051 456 -      6963 I
e Oryctolagus_cuniculus.CM000803.1                      141878516 2929 + 163896628 I
e Ochotona_princeps.JH802095.1                            4996729 2205 -  23139505 I
e Lepus_americanus.LepAme_scaffold_62849                    15480 2946 +     22452 I
e Perognathus_longimembris.PerPac_flattened_line_19359       1614 38 +     49596 I
e Dipodomys_stephensi.DipSte_scaffold_84338                  1789 28 -     11986 I
e Dipodomys_ordii.KN672545.1                              3659429 30 +   4240102 I
e Suricata_suricatta.SurSur_flattened_line_20339            32401 0 +     62062 C
e Ziphius_cavirostris.ZipCav_flattened_line_60625            1538 2 -     13665 I
e Zalophus_californianus.ZalCal_flattened_line_4097        219280 0 -    227762 C
e Vulpes_lagopus.VulLag_flattened_line_2045                143835 0 -    281493 C
e Vicugna_pacos.KN269600.1                                1527832 0 -   2331223 C
e Ursus_maritimus.KK498671.1                              6519892 0 +  28682327 C
e Uropsilus_gracilis.UroGra_scaffold_69449                   9768 0 +     10241 C
e Tursiops_truncatus.MRVK01000923.1                      69316794 2 -  96451834 I
e Trichechus_manatus.JH594618.1                          16088878 0 +  31416278 C
e Tragulus_javanicus.TraJav_scaffold_14717                   9149 2 +     90398 I
e Tonatia_saurophila.TonSau_scaffold_3334                  137563 275 -    259118 I
e Tapirus_terrestris.TapTer_scaffold_14939                  61041 0 +     99546 C
e Tapirus_indicus.TapInd_scaffold_176                      810399 0 +   1148477 C
e Tamandua_tetradactyla.TamTet_scaffold_26877               16259 379 +     45698 I
e Tadarida_brasiliensis.TadBra_scaffold_61492                1822 242 +     20549 I
e Sus_scrofa.CM000824.4                                 189273670 1086 + 218635234 I
e Spilogale_gracilis.SpiGra_flattened_line_905             238244 0 -    276980 C
e Solenodon_paradoxus.SolPar_flattened_line_1012            23185 0 +    739146 C
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   39231 0 -    114521 C
e Saiga_tatarica.SaiTat_scaffold_1069354                      105 0 -       709 C
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Rhinolophus_sinicus.LVEH01000179.1                      1792212 2 +   2252614 I
e Rangifer_tarandus.RanTarSib_scaffold_24239                20109 0 +     68503 C
e Puma_concolor.QAVW01000427.1                          131539433 0 - 161321710 C
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Pteronura_brasiliensis.PteBra_flattened_line_1343        249686 0 -    344369 C
e Pteronotus_parnellii.KE867983.1                            5588 252 -     27784 I
e Procavia_capensis.ProCapCap_scaffold_11797                50321 0 -     88779 C
e Platanista_gangetica.PlaMin_flattened_line_72990           8998 2 +     21690 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Phocoena_phocoena.PhoPho_flattened_line_53071              2530 2 +      8220 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    120818 0 -    135482 C
e Pantholops_hodgsonii.KE114631.1                         1071126 0 -   1292953 C
e Panthera_tigris.KE721879.1                              5032785 0 -   6340057 C
e Panthera_pardus.KV860323.1                              3643137 0 +  18214204 C
e Panthera_onca.PanOnc_flattened_line_1615                  39322 0 +    295523 C
e Ovis_canadensis.OviCan_scaffold_6251                      83485 0 +    140051 C
e Ovis_aries.CM001582.2                                 134082257 0 - 275406953 C
e Otocyon_megalotis.JAEUCK010005121.1                      314612 0 -    505867 C
e Orycteropus_afer.OryAfe_flattened_line_13509              63439 0 -     66828 C
e Orcinus_orca.KB316965.1                                 7228065 2 -   7562323 I
e Okapia_johnstoni.LVCL01S0017931.1                         41334 0 +     78940 C
e Odocoileus_virginianus.KZ101650.1                       1083245 0 +   1425656 C
e Odobenus_rosmarus.KB229369.1                             684428 0 -   3126709 C
e Nyctereutes_procyonoides.CAJHUB010000786.1                37467 0 +   3668941 C
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Neophocaena_asiaeorientalis.KZ688543.1                  3954389 2 -   4490290 I
e Neomonachus_schauinslandi.NINY01007774.1                4489721 0 -  14209539 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             6589 379 -      8794 I
e Myotis_myotis.MyoMyo_scaffold_6123                        13515 236 +     66751 I
e Myotis_lucifugus.GL429887.1                             3468272 238 -   3747815 I
e Myotis_davidii.KB114863.1                               5022194 233 +   6462685 I
e Myotis_brandtii.KE161952.1                               970769 237 +   8389877 I
e Mustela_putorius.JH417978.1                             4427567 0 -  28371801 C
e Murina_feae.MurFea_scaffold_2254                          23900 236 -    100666 I
e Mungos_mungo.MunMun_flattened_line_8729                  149746 0 -    168139 C
e Moschus_moschiferus.MosMos_scaffold_78805                  5813 0 -     19904 C
e Mormoops_blainvillei.MorMeg_scaffold_2952                162937 259 +    265003 I
e Monodon_monoceros.MonMon_M_scaffold_5598                 149798 2 +    154973 I
e Mirounga_angustirostris.MirAng_flattened_line_8852        16322 0 -    104932 C
e Miniopterus_schreibersii.MinSch_scaffold_24116            36998 214 +     45743 I
e Miniopterus_natalensis.LDJU01000022.1                   8212509 213 +  10048721 I
e Micronycteris_hirsuta.MicHir_scaffold_37978               24387 274 -     32043 I
e Microgale_talazaci.MicTal_scaffold_34660                  40768 0 -     48017 C
e Mesoplodon_bidens.MesBid_scaffold_96348                    2003 2 -     12939 I
e Mellivora_capensis.MelCap_flattened_line_15433             5726 0 -     87323 C
e Megaderma_lyra.MegLyr_scaffold_3562                       65026 2 -    234502 I
e Manis_pentadactyla.KN017078.1                             39380 0 +     58827 C
e Manis_javanica.JSZB01003966.1                            149232 0 +    252755 C
e Lycaon_pictus.CM007556.1                               11094608 0 +  39895028 C
e Loxodonta_africana.GL010040.1                          20597894 0 -  62548349 C
e Lipotes_vexillifer.KE558548.1                            139369 2 +   3060487 I
e Leptonychotes_weddellii.KB714749.1                      3090826 0 -   3498232 C
e Lasiurus_borealis.LasBor_scaffold_59542                    5042 241 +     26176 I
e Kogia_breviceps.KogBre_flattened_line_35920               26998 2 +     37189 I
e Inia_geoffrensis.IniGeo_flattened_line_66725              12417 2 +     17520 I
e Hyaena_hyaena.HyaHya_flattened_line_20729                 22640 0 -     67322 C
e Hipposideros_galeritus.HipGal_scaffold_52959                377 2 +     26078 I
e Hipposideros_armiger.JXIK01001085.1                      282608 2 -    477199 I
e Hippopotamus_amphibius.HipAmp_scaffold_1308              150208 0 +    277961 C
e Heterohyrax_brucei.HetBruBak_scaffold_13814               68359 0 -    108006 C
e Hemitragus_hylocrius.HemHyl_scaffold_16669                32467 0 -     91191 C
e Helogale_parvula.HelPar_flattened_line_22962              22066 0 +     53719 C
e Giraffa_tippelskirchi.LVKQ01S012154.1                    185599 0 -    189561 C
e Felis_nigripes.FelNig_flattened_line_8080                 26394 0 +     52776 C
e Felis_catus_fca126.CM031420.1                         129285299 0 - 158578461 C
e Eubalaena_japonica.EubJap_flattened_line_7756             64881 0 +     89355 C
e Eschrichtius_robustus.EscRob_flattened_line_685          318424 0 +    330699 C
e Equus_przewalskii.ATBW01073585.1                          16166 0 +     92910 C
e Equus_caballus.CM000402.2                              13354676 0 +  41866177 C
e Equus_asinus.JREZ01000062.1                             5856176 0 -   7175178 C
e Enhydra_lutris.KZ291749.1                              85876835 0 +  99434291 C
e Elephantulus_edwardii.JH947210.1                        7830035 1277 +  15467074 I
e Elaphurus_davidianus.JRFZ01086400.1                     1495795 0 +   1727528 C
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Echinops_telfairi.JH980316.1                           22999931 2 -  44670279 I
e Diceros_bicornis.DicBicMic_scaffold_9545                   6452 0 +    151128 C
e Dicerorhinus_sumatrensis.PEKH010003161.1                 325812 0 +    993696 C
e Desmodus_rotundus.KZ672188.1                           18700517 262 -  18957592 I
e Delphinapterus_leucas.KZ290064.1                       80040207 0 -  96802777 C
e Dasypus_novemcinctus.JH568778.1                          185121 383 -   6883506 I
e Cryptoprocta_ferox.CryFer_flattened_line_19014            56919 0 -     70449 C
e Crocidura_indochinensis.CroInd_scaffold_27484              1226 0 -     22648 C
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1337 2 -      5782 I
e Condylura_cristata.JH655880.1                          60621791 0 +  78930452 C
e Choloepus_hoffmanni.KN194586.1                           763329 503 +    964067 I
e Choloepus_didactylus.ChoDid_scaffold_36182                18024 504 -     21363 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_160623         6920 0 -      9338 C
e Catagonus_wagneri.CatWag_scaffold_1305                   162277 0 -    276539 C
e Carollia_perspicillata.CarPer_scaffold_4436               61226 261 +     67245 I
e Capra_hircus.CM004562.1                               135711414 0 - 157403528 C
e Capra_aegagrus.CM003214.1                              21330197 0 + 157394656 C
e Canis_lupus_orion.HG994411.1                           16461937 0 -  44759192 C
e Canis_lupus_familiaris.chr31                           11095152 0 +  39895921 C
e Canis_lupus_dingo.QKWQ01001993.1                       11272441 0 -  35597290 C
e Canis_lupus_VD.CanFam_VD_scaffold_16982                   20732 0 +     87036 C
e CanFam4.chr31                                          11525758 0 +  39901454 C
e Camelus_ferus.KB016973.1                                2976160 0 +   6889770 C
e Camelus_dromedarius.KN271192.1                           400424 0 -  15254737 C
e Camelus_bactrianus.KN276303.1                           3222722 0 -   8989139 C
e Bubalus_bubalis.KI419065.1                               674242 0 +   1914593 C
e Bos_taurus.CM000177.6                                  22664479 0 + 158972876 C
e Bos_mutus.JH883513.1                                     418090 0 +    998990 C
e Bos_indicus.CM003021.1                                 22955825 0 + 161108492 C
e Bison_bison.KN264915.1                                   301727 0 -   6870073 C
e Beatragus_hunteri.BeaHun_scaffold_21644                   47579 0 -     72089 C
e Balaenoptera_bonaerensis.DF502048.1                        8754 0 -     13118 C
e Balaenoptera_acutorostrata.KI537095.1                  26383581 0 +  51448160 C
e Artibeus_jamaicensis.ArtJam_scaffold_41619                10440 261 -     29036 I
e Antilocapra_americana.AntAmePen_scaffold_27338             2548 0 +     55446 C
e Anoura_caudifer.AnoCau_scaffold_422                      392020 257 -    631301 I
e Ammotragus_lervia.NIVO01013474.1                        3525117 0 +   4113121 C
e Ailurus_fulgens.LNAC01000003.1                          7099380 0 -  16596857 C
e Ailuropoda_melanoleuca.LNAT01000321.1                  10662594 0 +  23371972 C
e Acinonyx_jubatus.LLWD01000356.1                         2038912 0 +   3721120 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           20901 0 -    119109 C
e Glis_glis.GliGli_scaffold_79770                           15993 0 -     18683 C
e Zapus_hudsonius.ZapHud_scaffold_64392                     20218 0 -     20485 C
e Jaculus_jaculus.JH725517.1                              8577088 0 +  11848649 C
e Hylobates_pileatus_a.tarseq_592                             35773 13 -     60944 I
e Allactaga_bullata.AllBul_scaffold_70162                   21404 0 -     22067 C
e Galeopterus_variegatus.GalVar_scaffold_354               159184 0 +    324696 C
e Microtus_ochrogaster.CM001673.1                        22823881 0 -  98408828 C
e Xerus_inauris.XerIna_scaffold_7898                       128400 2868 -    134049 I
e Varecia_variegata.k141_775891                             27530 0 -     33872 C
e Varecia_rubra.k141_432109                                  7995 0 -     20643 C
e Tupaia_tana.TupTan_flattened_line_68454                    9338 0 +     13056 C
e Tupaia_chinensis.KB320831.1                             2797404 0 -   3938065 C
e Trachypithecus_pileatus.k141_1022309                       5226 0 +     13828 C
e Trachypithecus_phayrei.ctg3                            44662914 0 -  44834318 C
e Trachypithecus_obscurus.k141_1115109                       8130 0 -     28054 C
e Trachypithecus_melamera.k141_699241                        2986 0 -     24393 C
e Trachypithecus_leucocephalus.k141_381681                   3005 0 +     12481 C
e Trachypithecus_laotum.k141_760702                          4719 0 +     14371 C
e Trachypithecus_hatinhensis.k141_504423                     6067 0 -     15592 C
e Trachypithecus_germaini.k141_868450                        3883 0 -     11566 C
e Trachypithecus_geei.k141_670367                           46082 0 -     54611 C
e Trachypithecus_francoisi.k141_768164                       4689 0 -     14244 C
e Trachypithecus_cristatus.k141_1011511                      5261 0 -     12939 C
e Trachypithecus_crepusculus.k141_1588528                   23360 0 -     32910 C
e Trachypithecus_auratus.k141_738098                        29800 0 +     38948 C
e Tarsius_wallacei.k141_48636                               60532 3805 +     65473 I
e Tarsius_lariang.k141_609102                               27216 3812 +     42269 I
e Spermophilus_dauricus.KZ294190.1                        2243603 0 +   2842873 C
e Sigmodon_hispidus.SigHis_scaffold_11332                  104689 0 -    120886 C
e Semnopithecus_vetulus.k141_1143185                        16479 0 +     30600 C
e Semnopithecus_schistaceus.k141_387461                     33457 0 +     42640 C
e Semnopithecus_priam.k141_410937                           40312 0 +     46263 C
e Semnopithecus_johnii.k141_785014                         121532 0 +    130994 C
e Semnopithecus_hypoleucos.k141_761524                      11528 0 +     20762 C
e Semnopithecus_entellus.k141_1572367                        6153 0 +     15331 C
e Rhinopithecus_strykeri.ctg4                            44859307 0 -  45163003 C
e Rhinopithecus_bieti.k119_554384                            2917 0 -     17045 C
e Rattus_norvegicus.chr11                                13917336 0 +  90463843 C
e Pygathrix_nigripes_a.k141_101123                             8537 0 +     18040 C
e Pygathrix_nigripes_b.ctg79                                 6809148 0 +   6970761 C
e Pygathrix_cinerea.k141_374971                             32651 0 +     56732 C
e Psammomys_obesus.NESX01026517.1                           37921 0 +     77221 C
e Propithecus_verreauxi.k141_158021                         42002 0 -     48185 C
e Propithecus_tattersalli.k141_907138                       19738 0 -     53241 C
e Propithecus_perrieri.k141_7554                            20103 0 +     27322 C
e Propithecus_edwardsi.k141_1317105                         38180 0 -     44753 C
e Propithecus_diadema.k141_577245                           45793 0 +     52369 C
e Propithecus_coronatus.k141_1353159                         6446 0 +     11805 C
e Propithecus_coquerelli.NW_012147863.1                     20390 0 -     30946 C
e Prolemur_simus.MPIZ01000048.1                           6851355 0 +  12164890 C
e Presbytis_mitrata.k141_860013                              8661 0 +     14865 C
e Presbytis_comata.k141_672698                               8546 0 -     15069 C
e Pithecia_vanzolinii.k141_831006                           15424 0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514 0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521 0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292 0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093 0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038 0 +     78826 C
e Pithecia_albicans.k141_991845                             45662 0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000036.1               26743271 0 +  26888534 C
e Piliocolobus_kirkii.k141_929665                            4788 0 +      7694 C
e Piliocolobus_gordonorum.k141_1270531                       5421 0 -     17985 C
e Piliocolobus_badius.k141_1987485                           4802 0 -      5908 C
e Peromyscus_maniculatus.KI615518.1                       4955125 0 -   8017169 C
e Perodicticus_potto.k141_1136815                           10207 0 +     61070 C
e Perodicticus_ibeanus.k141_117958                           9080 0 -     23713 C
e Otolemur_garnettii.GL873528.1                          18011493 0 -  38779656 C
e Otolemur_crassicaudatus.k141_505435                        3512 0 -     53940 C
e Onychomys_torridus.OnyTor_scaffold_12578                  42756 0 +     62360 C
e Ondatra_zibethicus.OndZib_scaffold_6821                  130071 0 +    145789 C
e Octodon_degus.JH651621.1                                3687420 1881 +  10294119 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65678347 0 +  89412551 C
e Nycticebus_coucang.k141_771591                            13545 0 +     16181 C
e Nycticebus_bengalensis.LG16                            65570136 0 -  95554990 C
e Nasalis_larvatus.k141_153429                              11264 0 +     48152 C
e Nannospalax_galili.KL201303.1                            119867 0 +    362372 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     91920 1922 -    117718 I
e Muscardinus_avellanarius.MusAve_scaffold_9643             14525 0 +     98495 C
e Mus_spretus.CM004110.1                                 74336277 0 +  97876770 C
e Mus_pahari.LT608305.1                                  67559927 0 +  89017189 C
e Mus_musculus.chr16                                     75493550 0 +  98207768 C
e Mus_caroli.LT608236.1                                  70771497 0 +  92629107 C
e Mirza_zaza.k141_593947                                     4089 0 -     12809 C
e Microcebus_murinus.CM007691.1                          16513035 0 +  47401472 C
e Mesocricetus_auratus.KB708139.1                         1051192 0 -  26018355 C
e Meriones_unguiculatus.MerUng_scaffold_52233               15570 0 +     15977 C
e Marmota_marmota.CZRN01000005.1                         36877588 0 +  64221397 C
e Loris_tardigradus.ctg97                                 3781302 0 +   6799190 C
e Loris_lydekkerianus.k141_550999                           13563 0 +     84689 C
e Lepilemur_septentrionalis.k141_710646                      1084 0 -     13103 C
e Lepilemur_ruficaudatus.k141_574529                        35037 0 -     38897 C
e Lepilemur_dorsalis.k141_134267                            56656 0 +     63517 C
e Lepilemur_ankaranensis.k141_884009                        27292 0 +     39228 C
e Lemur_catta.scaffold_1                                258409979 0 - 285822530 C
e Indri_indri.k141_2197838                                    116 0 +      3484 C
e Ictidomys_tridecemlineatus.JH393315.1                   7129728 0 +  13083262 C
e Hystrix_cristata.HysCri_scaffold_50788                     7688 1865 +     22540 I
e Heterocephalus_glaber.JH602058.1                        2560252 0 +  31725842 C
e Hapalemur_occidentalis.k141_797938                        48308 0 -     54384 C
e Hapalemur_meridionalis.k141_186231                        31681 0 -     42470 C
e Hapalemur_griseus.k141_1387522                             8432 0 +     56096 C
e Hapalemur_gilberti.k141_279011                             3105 0 -     11661 C
e Hapalemur_alaotrensis.k141_1280836                         4627 0 +     10286 C
e Graphiurus_murinus.GraMur_scaffold_4493                   79386 0 +    118900 C
e Galagoides_demidoff.k141_1769638                          13144 0 +     27357 C
e Galago_senegalensis.k141_964197                           16038 0 -     43889 C
e Galago_moholi.ctg555                                     213680 0 -    847004 C
e Fukomys_damarensis.KN123630.1                          13895732 0 -  19261668 C
e Eulemur_sanfordi.k141_186399                              18623 0 -     29447 C
e Eulemur_rufus.k141_1620292                                35891 0 +     46535 C
e Eulemur_rubriventer.k141_411740                           21157 0 +     26808 C
e Eulemur_mongoz.k141_825972                                18693 0 +     27497 C
e Eulemur_macaco.k141_747087                                 2027 0 -     19505 C
e Eulemur_fulvus.k141_653297                                14043 0 +    109717 C
e Eulemur_flavifrons.k141_903901                            10560 0 +     60246 C
e Eulemur_coronatus.k141_3240342                            14235 0 +     36558 C
e Eulemur_collaris.k141_1015201                              1102 0 -      4292 C
e Eulemur_albifrons.k141_715837                              7832 0 +     13586 C
e Ellobius_talpinus.LOJH01198462.1                           1213 0 -      1901 C
e Ellobius_lutescens.LOEQ01003611.1                        243471 0 -    369425 C
e Dolichotis_patagonum.DolPat_scaffold_14102                39604 0 -     73477 C
e Daubentonia_madagascariensis.ctg11                     16847687 0 +  31942871 C
e Dasyprocta_punctata.DasPun_flattened_line_634             61584 0 -    236241 C
e Cuniculus_paca.CunPac_flattened_line_16637                20446 0 +     26546 C
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 32592 1717 -     67205 I
e Ctenodactylus_gundi.CteGun_scaffold_447                  213664 0 -    956709 C
e Cricetulus_griseus.LT883672.1                          53034667 0 +  72327488 C
e Cricetomys_gambianus.CriGam_scaffold_949                 282297 0 -    399297 C
e Colobus_polykomos.k141_1406057                            19335 0 +     23629 C
e Colobus_guereza.LG08                                  147667351 0 + 156195979 C
e Colobus_angolensis.KN985967.1                          10889423 0 +  10971483 C
e Chinchilla_lanigera.JH721867.1                         15963245 964 +  43084221 I
e Cheirogaleus_medius.k141_133808                           10871 0 +     13308 C
e Cheirogaleus_major.k141_1157592                           61827 0 -     68416 C
e Cephalopachus_bancanus.k141_702587                         8788 3391 +     21754 I
e Cavia_tschudii.CavTsc_scaffold_488                       177725 1742 +    436027 I
e Cavia_porcellus.DS562889.1                             15799553 1742 -  24440124 I
e Cavia_aperea.AVPZ01000278.1                            15787615 1741 -  24422027 I
e Carlito_syrichta.NW_007248099.1                          309764 3411 +    345090 I
e Avahi_peyrierasi.k141_798820                               3156 0 +      6337 C
e Avahi_laniger.k141_2840928                                 9540 0 -     16375 C
e Arctocebus_calabarensis.k141_587554                        4710 0 +      9265 C
e Acomys_cahirinus.AcoCah_scaffold_1625                    117433 0 -    189883 C
e Pan_paniscus.CM003386.1                               127578173 0 - 205426864 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               17124 41 +    209709 GACATAAA---------CTAGAAT----TAAGACAAGAATATGTCAAAGAGAGT
s Allenopithecus_nigroviridis.k141_2469532                   4987 41 -     60446 gacataaa---------ctggaat----taagacaagagtatgtcaaagagagt
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         5704 41 -     29318 gacataaa---------ctagaat----taagacaagagtatgtcaaagagagt
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         4642 41 +     38766 gacataaa---------ctagaat----taagacaagagtatgtcaaagagagt
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          5598 41 -     80423 gacataaa---------ctagaat----taagacaagagtatgtcaaagagagt
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                               590 40 +     19852 -ACATAAA---------CTAGAAT----TAAGACAACAGTATCTCAAAGAGAGT
i Alouatta_belzebul.k141_276091                         N 0 C 0
s Alouatta_caraya.k141_664908                                2845 41 -     12443 GACATAAA---------CTAGAAT----TAAGACAACAGTATGTCAAAGAGAGT
i Alouatta_caraya.k141_664908                           I 305 C 0
s Alouatta_discolor.k141_2023149                              145 40 +      5070 -ATATAAA---------CTAGAAT----TAAGACAACAGTATGTCAAAGAGAGT
i Alouatta_discolor.k141_2023149                        N 0 C 0
s Alouatta_juara.k141_1268583                               10477 41 -     10533 GACATAAA---------CTAGAAT----TAAGACGACAGTATGTCAAAGAGAGT
i Alouatta_juara.k141_1268583                           C 0 C 0
s Alouatta_macconnelli.k141_2318944                          2628 41 -     24210 GACATAAA---------CTAGAAT----TAAGACAACAGTATGTCAAAGAGAGT
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           29210 41 -     30219 GACATAAA---------CTAGAAT----TAAGACAACAGTATGTCAAAGAGAGT
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_405616                              5051 36 +     16794 -----AAA---------CTAGAAT----TAAGACAACAGTATGTCAAAGAGAGT
i Alouatta_palliata.k141_405616                         N 0 C 0
s Alouatta_puruensis.k141_1602819                             179 40 -      1470 -ACATAAA---------CTAGAAT----TAAGACAACAGTATGTCAAAGAGAGT
i Alouatta_puruensis.k141_1602819                       N 0 C 0
s Alouatta_seniculus.k141_790278                             4323 41 -      9835 GACATAAA---------CTAGAAT----TAAGACAACAGTATGTCAAAGAGAGT
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Aotus_azarae.k141_3170768                                 65938 41 +     78111 gacataaa---------ctagaat----taagacaacagtatgtcaaagagagt
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            8884 41 +     22701 gacataaa---------ctagaat----taagacaacagtatgccaaagagagt
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5752842 41 +   9889416 GACATAAA---------CTAGAAT----TAAGACAACAGTATGCCAAAGAGAGT
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             9440 41 -    104377 gacataaa---------ctagaat----taagacaacagtatgccaaagagagt
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               9447 41 +     23246 gacataaa---------ctagaat----taagacaacagtatgccaaagagagt
i Aotus_vociferans.k141_718647                          C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9542731 41 +  39197703 gacataaa---------ctagaat----taaggcaacagtacgtcaaagagagt
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             64004 41 +     85812 gacataaa---------ctagaat----taaggcaacagtacgtcaaagagagt
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                15017 41 +     89302 gacataaa---------ctagaat----taaggcaacagtacgtcaaagagagt
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             19518 41 -     58268 gacataaa---------ctagaat----taaggcaacagtacgtcaaagagagt
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             67512 41 +    119057 gacataaa---------ctagaat----taaggcaacagtacgtcaaagagagt
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               9481 41 -     25888 gacataaa---------ctagaat----taaggcaacagtacgtcaaagagagt
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Cacajao_ayresi.k141_724503                               117387 41 -    171031 gacataaa---------ctagaat----taagacaacagtatgtcaaagagaat
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 16407 41 +    125063 gacataaa---------ctagaat----taagacaacagtatgtcaaagagaat
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                18454 41 -    216513 gacataaa---------ctagaat----taagacaacagtatgtcaaagagaat
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       10997 41 -    134917 gacataaa---------ctagaat----taagacaacagtatgtcaaagagaat
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Cebus_albifrons.Contig22                               18894219 41 -  29618158 gacataaa---------ctagaat----taaggcaatagtatgtcaaagatagt
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                11763 41 -     26817 gacataaa---------ctagaat----taaggcaatagtatgtcaaagagagt
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                16006 41 +     25043 gacataaa---------ctagaat----taaggcaatagtatgtcaaagagagt
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cercocebus_atys.KQ010443.1                              6558928 41 +   6739814 GACATAAA---------CTAGAAT----TAAGACAAGAGTATGTCAAAGAGAGT
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      30405 41 +     60454 gacataaa---------ctagaat----taagacaagagtatgtcaaagagagt
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          5609 41 -     21101 gacataaa---------ctagaat----taagacaagagtatgtcaaagagagt
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         62919 41 -    107033 gacataaa---------ctagaat----taagacaagagtatgtcaaagagagt
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        5781 41 -     17608 gacataaa---------ctagaat----taagacaagagtatgtcaaagaaagt
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          2945 41 +     45019 gacataaa---------ctagaat----taagacaagcgtatgtcaaagagagt
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           3011 41 +     15177 gacataaa---------ctagaat----taagacaagagtatgtcaaagagagt
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          5829 41 +     16677 gacataaa---------ctagaat----taagacaagagtatgtcaaagagagt
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           28017 41 +     35983 gacataaa---------ctagaat----taagacaagagtatgtcaaagagagt
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11994548 41 +  12117833 gacataaa---------ctagaat----taagacaagcgtatgtcaaagagagt
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46481309 41 +  46592721 gacataaa---------ctagaat----taagacaagagtatgtcaaagagagt
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      44860 41 -     45581 gacataaa---------ctagaat----taagacaagagtatgtcaaagagagt
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       5841 41 +     35577 gacataaa---------ctagaat----taagacacgcgtatgtcaaagagagt
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        5635 41 -     25661 gacataaa---------ctagaat----taagacaagcgtatgtcaaagagagt
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        5593 41 -     17744 gacataaa---------ctagaat----taagacaagagtatgtcaaagagagt
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        25178 41 +     37128 gacataaa---------ctagaat----taagacaagagtatgtcaaagagagt
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Cheracebus_lucifer.k141_619653                             9044 41 -     18223 GACATAAA---------TTAGAAT----TAAGACAGCAGTATGTCAAAGAGAGT
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                               783 41 +    188999 GACATAAA---------TTAGAAT----TAAGACAGCAGTATGTCAAAGAGAGT
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           45082 41 +     57117 GACATAAA---------TTAGAAT----TAAGACAGCAGTATGTCAAAGAGAGT
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          49761 41 +     54541 GACATAAA---------TTAGAAT----TAAGACAGCAGTATGTCAAAGAGAGT
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chiropotes_israelita.k141_1189915                         74566 41 +    196370 gacataaa---------ctagaat----taagacaacagtatgtcaaagagagt
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          18747 41 +     40510 gacataaa---------ctagaat----taagacaacagtatgtcaaagagagt
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15143362 41 -  15256731 gacgtaaa---------ctagaat----gaagacaagagtatgtcaaagagagt
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      37826 41 -     53260 gacgtaaa---------ctagaat----taagacaagagtatgtcaaagagagt
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101148385 41 + 101219884 GACGTAAA---------CTAGAAT----TAAGACAAGAGTATGTCAAAGAGAGT
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Erythrocebus_patas.Contig8                             48780396 41 -  48907691 gacataaa---------ctagaat----taagacaagagtatgtcaaagagagt
i Erythrocebus_patas.Contig8                            C 0 C 0
s Gorilla_beringei.k141_111300                               8839 37 -     14630 gacataaa---------ctagaat----taagagaagagtatgtca----gagt
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119655939 37 - 195582420 gacataaa---------ctagaat----taagagaagagtatgtca----gagt
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Hoolock_leuconedys.ctg649                                   108469 41 +    115816 gacataaa---------ctagaat----tgagacaagagtatgtcaaagagagt
i Hoolock_leuconedys.ctg649                                C 0 I 80
s Hylobates_abbotti.k141_1816750                             1297 41 +      3202 gacataaa---------ctagaat----tgagacgagagtatgtcaaagagagt
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1633646                              1267 41 -      2102 gacataaa---------ctagaat----tgagacgagagtatgtcaaagagagt
i Hylobates_agilis.k141_1633646                         C 0 C 0
s Hylobates_klossii.k141_468230                              2783 41 +      5464 gacataaa---------ctagaat----tgagacaagagtatgtcaaagagagt
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14628132 41 -  25970782 gacataaa---------ctagaat----tgagacaagagtatgtcaaagagagt
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                             683 41 +      4161 gacataaa---------ctagaat----tgagacgagagtatgtcaaagagagt
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Lagothrix_lagothricha.k141_12968                          53600 41 -    147782 gacataaa---------ctagaat----taagacaacagtatgtcaaagagagt
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lophocebus_aterrimus.ctg55                             19252016 41 +  19376315 gacataaa---------ctagaat----taagacaagagtatgtcaaagagagt
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Macaca_arctoides.k141_2201161                             23767 41 +     74745 gacataaa---------ctagaat----taagacaagagtatgtcaaagagagt
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12710228 41 +  12821369 gacataaa---------ctagaat----taagacaagagtatgtcaaagagagt
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                2802 41 -     26467 gacataaa---------ctagaat----taagacaagagtatgtcaaagagagt
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           50673 41 +     63263 gacataaa---------ctagaat----taagacaagagtatgtcaaagagagt
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 2783 41 -     26361 gacataaa---------ctagaat----taagacaagagtatgtcaaagagagt
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 5973 41 -      7381 gacataaa---------ctagaattaag----acaagagtatgtcaaagagagt
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  49198 45 -     79256 gacataaa---------ctagaattaagtaagacaagagtatgtcaaagagagt
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196039300 41 + 196197964 GACATAAA---------CTAGAAT----TAAGACAAGAGTATGTCAAAGAGAGT
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11449466 45 +  11645122 GACATAAA---------CTAGAATTAAGTAAGACAAGAGTATGTCAAAGAGAGT
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   8152 45 -     46448 gacataaa---------ctagaattaagtaagacaagagtatgtcaaagagagt
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                5818 41 -     13212 gacataaa---------ctagaat----taagacaagagtatgtcaaagagagt
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 19495 45 -     55006 gacataaa---------ctagaattaagtaagacaagagtatgtcaaagagagt
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43844614 41 +  43892939 gacataaa---------ctagaattaag----acaagagtatgtcaaagagagt
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               20782 41 -     24607 gacataaa---------ctagaat----taagacaagagtatgtcaaagagagt
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               8149 45 -     27140 gacataaa---------ctagaattaagtaagacaagagtatgtcaaagagagt
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43441189 41 -  43563597 gacataaa---------ctagaat----taagacaagagtatgtcaaagagagt
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4453993 41 -   4543643 gacataaa---------ctagaat----taagacaagagtatgtcaaagagagt
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         5735 41 +     29742 gacataaa---------ctagaat----taagacaagagtatgtcaaagagagt
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Nomascus_annamensis.k141_1817463                            423 41 -      1070 gacataaa---------ctagaat----tgagacaagagtatgtcaaagagagt
i Nomascus_annamensis.k141_1817463                      C 0 C 0
s Nomascus_concolor.k141_70405                                423 41 +      1153 gacataaa---------ctagaat----tgagacaagagtatgtcaaagagatt
i Nomascus_concolor.k141_70405                          C 0 C 0
s Nomascus_gabriellae.k141_1400361                            358 41 -      2203 gacataaa---------ctagaat----tgagacaagagtatgtcaaagagagt
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_2374                            2042 41 +      8673 gacataaa---------ctagaat----tgagacaagagtatgtcaaagagagt
i Nomascus_siki_b.tarseq_2374                       I 6 I 35
s Nomascus_siki_a.k141_421408                                   268 41 +     16235 GACATAAA---------CTAGAAT----TGAGACAAGAGTATGTCAAAGAGAGT
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Pan_troglodytes.NBAG03000771.1                           185043 50 +    210065 GACATAAATGACATAAACTAGAAT----TAAGACAAGAGTATGTCAAAGAGAGT
i Pan_troglodytes.NBAG03000771.1                        I 3005 I 166
s Papio_anubis.CM001492.2                               188159978 41 - 188283584 GACATAAA---------CTAGAAT----TAAGACAAGAGTATGTCAAAGAGAGT
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              3068 41 +     25005 gacataaa---------ctagaat----taagacaagagtatgtcaaagagagt
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47517350 41 +  47705337 gacataaa---------ctagaat----taagacaagagtatgtcaaagagagt
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 71341 41 -    104429 gacataaa---------ctagaat----taagacaagagtatgtcaaagagagt
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    9873 41 +     14967 gacataaa---------ctagaat----taagacaagagtatgtcaaagagagt
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 5738 41 -      7628 gacataaa---------ctagaat----taagacaagagtatgtcaaagagagt
i Papio_ursinus.k141_1345919                            C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       25693 41 +     44506 gacataaa---------ttagaat----taagacagcagtatgtcaaagagagt
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        25906 41 +     67491 gacataaa---------ttagaat----taagacagcagtatgtcaaagagagt
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      16145 41 -     98129 gacataaa---------ttagaat----taagacagcagtatgtcaaagagagt
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     25745 41 +    147771 gacataaa---------ttagaat----taagacagcagtatgtcaaagagagt
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         2381 41 -     43940 gacataaa---------ttagaat----taagacagcagtatgtcaaagagagt
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          6464 41 -     55515 gacataaa---------ttagaat----taagacagcagtatgtcaaagagagt
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         25818 41 +    152463 gacataaa---------ttagaat----taagacagcagtatgtcaaagagagt
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       3626 41 -    119457 gacataaa---------ttagaat----taagacagcagtatgtcaaagagagt
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         15541 41 +    134592 gacataaa---------ttagaat----taagacagcagtatgtcaaagagagt
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          26128 41 -     75465 gacataaa---------ttagaat----taagacagcagtatgtcaaagagagt
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              190716 41 -    373494 GACATAAA---------CTAGAAT----TAAGAGAAGAGTATGTCAAAGAGAGT
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19811363 41 +  19899266 gacataaa---------ctagaat----taagagaagagtatgtcaaagagagt
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15676151 37 -  43202129 GACATACA---------CTAGAAT----TAAGACAACAGTATGTC----AGAGT
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        8064 37 +     34089 gacataaa---------ctagaat----taagacaacagtatgtc----agagt
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              8006 37 -     60842 gacataaa---------ctagaat----taagacaacagtatgtc----agagt
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              8099 37 +     67014 gacataaa---------ctagaat----taagacaacagtatgtc----agagt
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              8077 37 +     60816 gacataaa---------ctagaat----taagacaacagtatgtc----agagt
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 8014 37 -     76454 gacataaa---------ctagaat----taagacaacagtatgtc----agagt
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17344805 41 -  30362882 gacataaa---------ctagaat----taagacaatagtatgtcaaagagagt
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         24126 41 -     62485 gacataaa---------ctagaat----taagacaatagtatgtcaaagagagt
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        18390 41 -  13920577 gacataaa---------ctagaat----tgagacaagagtatttcaaagagagt
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Theropithecus_gelada.CM009951.1                       194011511 41 - 194193292 GACATAAA---------CTAGAAT----TAAGACAAGAGTATGTCAAAGAGAGT
i Theropithecus_gelada.CM009951.1                       C 0 C 0
e Eptesicus_fuscus.JH977687.1                             4708429 237 +   6522550 I
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Petromus_typicus.PetTyp_scaffold_33007                    16921  0 -     36578 C
e Sorex_araneus.JH798170.1                               17769647  0 -  27805282 C
e Dinomys_branickii.DinBra_scaffold_1996                   158442 1030 +    228994 I
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           4051 456 -      6963 I
e Oryctolagus_cuniculus.CM000803.1                      141878516 2929 + 163896628 I
e Ochotona_princeps.JH802095.1                            4996729 2205 -  23139505 I
e Lepus_americanus.LepAme_scaffold_62849                    15480 2946 +     22452 I
e Perognathus_longimembris.PerPac_flattened_line_19359       1614 38 +     49596 I
e Dipodomys_stephensi.DipSte_scaffold_84338                  1789 28 -     11986 I
e Dipodomys_ordii.KN672545.1                              3659429 30 +   4240102 I
e Suricata_suricatta.SurSur_flattened_line_20339            32401  0 +     62062 C
e Ziphius_cavirostris.ZipCav_flattened_line_60625            1538  2 -     13665 I
e Zalophus_californianus.ZalCal_flattened_line_4097        219280  0 -    227762 C
e Vulpes_lagopus.VulLag_flattened_line_2045                143835  0 -    281493 C
e Vicugna_pacos.KN269600.1                                1527832  0 -   2331223 C
e Ursus_maritimus.KK498671.1                              6519892  0 +  28682327 C
e Uropsilus_gracilis.UroGra_scaffold_69449                   9768  0 +     10241 C
e Tursiops_truncatus.MRVK01000923.1                      69316794  2 -  96451834 I
e Trichechus_manatus.JH594618.1                          16088878  0 +  31416278 C
e Tragulus_javanicus.TraJav_scaffold_14717                   9149  2 +     90398 I
e Tonatia_saurophila.TonSau_scaffold_3334                  137563 275 -    259118 I
e Tapirus_terrestris.TapTer_scaffold_14939                  61041  0 +     99546 C
e Tapirus_indicus.TapInd_scaffold_176                      810399  0 +   1148477 C
e Tamandua_tetradactyla.TamTet_scaffold_26877               16259 379 +     45698 I
e Tadarida_brasiliensis.TadBra_scaffold_61492                1822 242 +     20549 I
e Sus_scrofa.CM000824.4                                 189273670 1086 + 218635234 I
e Spilogale_gracilis.SpiGra_flattened_line_905             238244  0 -    276980 C
e Solenodon_paradoxus.SolPar_flattened_line_1012            23185  0 +    739146 C
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   39231  0 -    114521 C
e Saiga_tatarica.SaiTat_scaffold_1069354                      105  0 -       709 C
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Rhinolophus_sinicus.LVEH01000179.1                      1792212  2 +   2252614 I
e Rangifer_tarandus.RanTarSib_scaffold_24239                20109  0 +     68503 C
e Puma_concolor.QAVW01000427.1                          131539433  0 - 161321710 C
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Pteronura_brasiliensis.PteBra_flattened_line_1343        249686  0 -    344369 C
e Pteronotus_parnellii.KE867983.1                            5588 252 -     27784 I
e Procavia_capensis.ProCapCap_scaffold_11797                50321  0 -     88779 C
e Platanista_gangetica.PlaMin_flattened_line_72990           8998  2 +     21690 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Phocoena_phocoena.PhoPho_flattened_line_53071              2530  2 +      8220 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    120818  0 -    135482 C
e Pantholops_hodgsonii.KE114631.1                         1071126  0 -   1292953 C
e Panthera_tigris.KE721879.1                              5032785  0 -   6340057 C
e Panthera_pardus.KV860323.1                              3643137  0 +  18214204 C
e Panthera_onca.PanOnc_flattened_line_1615                  39322  0 +    295523 C
e Ovis_canadensis.OviCan_scaffold_6251                      83485  0 +    140051 C
e Ovis_aries.CM001582.2                                 134082257  0 - 275406953 C
e Otocyon_megalotis.JAEUCK010005121.1                      314612  0 -    505867 C
e Orycteropus_afer.OryAfe_flattened_line_13509              63439  0 -     66828 C
e Orcinus_orca.KB316965.1                                 7228065  2 -   7562323 I
e Okapia_johnstoni.LVCL01S0017931.1                         41334  0 +     78940 C
e Odocoileus_virginianus.KZ101650.1                       1083245  0 +   1425656 C
e Odobenus_rosmarus.KB229369.1                             684428  0 -   3126709 C
e Nyctereutes_procyonoides.CAJHUB010000786.1                37467  0 +   3668941 C
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Neophocaena_asiaeorientalis.KZ688543.1                  3954389  2 -   4490290 I
e Neomonachus_schauinslandi.NINY01007774.1                4489721  0 -  14209539 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             6589 379 -      8794 I
e Myotis_myotis.MyoMyo_scaffold_6123                        13515 236 +     66751 I
e Myotis_lucifugus.GL429887.1                             3468272 238 -   3747815 I
e Myotis_davidii.KB114863.1                               5022194 233 +   6462685 I
e Myotis_brandtii.KE161952.1                               970769 237 +   8389877 I
e Mustela_putorius.JH417978.1                             4427567  0 -  28371801 C
e Murina_feae.MurFea_scaffold_2254                          23900 236 -    100666 I
e Mungos_mungo.MunMun_flattened_line_8729                  149746  0 -    168139 C
e Moschus_moschiferus.MosMos_scaffold_78805                  5813  0 -     19904 C
e Mormoops_blainvillei.MorMeg_scaffold_2952                162937 259 +    265003 I
e Monodon_monoceros.MonMon_M_scaffold_5598                 149798  2 +    154973 I
e Mirounga_angustirostris.MirAng_flattened_line_8852        16322  0 -    104932 C
e Miniopterus_schreibersii.MinSch_scaffold_24116            36998 214 +     45743 I
e Miniopterus_natalensis.LDJU01000022.1                   8212509 213 +  10048721 I
e Micronycteris_hirsuta.MicHir_scaffold_37978               24387 274 -     32043 I
e Microgale_talazaci.MicTal_scaffold_34660                  40768  0 -     48017 C
e Mesoplodon_bidens.MesBid_scaffold_96348                    2003  2 -     12939 I
e Mellivora_capensis.MelCap_flattened_line_15433             5726  0 -     87323 C
e Megaderma_lyra.MegLyr_scaffold_3562                       65026  2 -    234502 I
e Manis_pentadactyla.KN017078.1                             39380  0 +     58827 C
e Manis_javanica.JSZB01003966.1                            149232  0 +    252755 C
e Lycaon_pictus.CM007556.1                               11094608  0 +  39895028 C
e Loxodonta_africana.GL010040.1                          20597894  0 -  62548349 C
e Lipotes_vexillifer.KE558548.1                            139369  2 +   3060487 I
e Leptonychotes_weddellii.KB714749.1                      3090826  0 -   3498232 C
e Lasiurus_borealis.LasBor_scaffold_59542                    5042 241 +     26176 I
e Kogia_breviceps.KogBre_flattened_line_35920               26998  2 +     37189 I
e Inia_geoffrensis.IniGeo_flattened_line_66725              12417  2 +     17520 I
e Hyaena_hyaena.HyaHya_flattened_line_20729                 22640  0 -     67322 C
e Hipposideros_galeritus.HipGal_scaffold_52959                377  2 +     26078 I
e Hipposideros_armiger.JXIK01001085.1                      282608  2 -    477199 I
e Hippopotamus_amphibius.HipAmp_scaffold_1308              150208  0 +    277961 C
e Heterohyrax_brucei.HetBruBak_scaffold_13814               68359  0 -    108006 C
e Hemitragus_hylocrius.HemHyl_scaffold_16669                32467  0 -     91191 C
e Helogale_parvula.HelPar_flattened_line_22962              22066  0 +     53719 C
e Giraffa_tippelskirchi.LVKQ01S012154.1                    185599  0 -    189561 C
e Felis_nigripes.FelNig_flattened_line_8080                 26394  0 +     52776 C
e Felis_catus_fca126.CM031420.1                         129285299  0 - 158578461 C
e Eubalaena_japonica.EubJap_flattened_line_7756             64881  0 +     89355 C
e Eschrichtius_robustus.EscRob_flattened_line_685          318424  0 +    330699 C
e Equus_przewalskii.ATBW01073585.1                          16166  0 +     92910 C
e Equus_caballus.CM000402.2                              13354676  0 +  41866177 C
e Equus_asinus.JREZ01000062.1                             5856176  0 -   7175178 C
e Enhydra_lutris.KZ291749.1                              85876835  0 +  99434291 C
e Elephantulus_edwardii.JH947210.1                        7830035 1277 +  15467074 I
e Elaphurus_davidianus.JRFZ01086400.1                     1495795  0 +   1727528 C
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Echinops_telfairi.JH980316.1                           22999931  2 -  44670279 I
e Diceros_bicornis.DicBicMic_scaffold_9545                   6452  0 +    151128 C
e Dicerorhinus_sumatrensis.PEKH010003161.1                 325812  0 +    993696 C
e Desmodus_rotundus.KZ672188.1                           18700517 262 -  18957592 I
e Delphinapterus_leucas.KZ290064.1                       80040207  0 -  96802777 C
e Dasypus_novemcinctus.JH568778.1                          185121 383 -   6883506 I
e Cryptoprocta_ferox.CryFer_flattened_line_19014            56919  0 -     70449 C
e Crocidura_indochinensis.CroInd_scaffold_27484              1226  0 -     22648 C
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1337  2 -      5782 I
e Condylura_cristata.JH655880.1                          60621791  0 +  78930452 C
e Choloepus_hoffmanni.KN194586.1                           763329 503 +    964067 I
e Choloepus_didactylus.ChoDid_scaffold_36182                18024 504 -     21363 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_160623         6920  0 -      9338 C
e Catagonus_wagneri.CatWag_scaffold_1305                   162277  0 -    276539 C
e Carollia_perspicillata.CarPer_scaffold_4436               61226 261 +     67245 I
e Capra_hircus.CM004562.1                               135711414  0 - 157403528 C
e Capra_aegagrus.CM003214.1                              21330197  0 + 157394656 C
e Canis_lupus_orion.HG994411.1                           16461937  0 -  44759192 C
e Canis_lupus_familiaris.chr31                           11095152  0 +  39895921 C
e Canis_lupus_dingo.QKWQ01001993.1                       11272441  0 -  35597290 C
e Canis_lupus_VD.CanFam_VD_scaffold_16982                   20732  0 +     87036 C
e CanFam4.chr31                                          11525758  0 +  39901454 C
e Camelus_ferus.KB016973.1                                2976160  0 +   6889770 C
e Camelus_dromedarius.KN271192.1                           400424  0 -  15254737 C
e Camelus_bactrianus.KN276303.1                           3222722  0 -   8989139 C
e Bubalus_bubalis.KI419065.1                               674242  0 +   1914593 C
e Bos_taurus.CM000177.6                                  22664479  0 + 158972876 C
e Bos_mutus.JH883513.1                                     418090  0 +    998990 C
e Bos_indicus.CM003021.1                                 22955825  0 + 161108492 C
e Bison_bison.KN264915.1                                   301727  0 -   6870073 C
e Beatragus_hunteri.BeaHun_scaffold_21644                   47579  0 -     72089 C
e Balaenoptera_bonaerensis.DF502048.1                        8754  0 -     13118 C
e Balaenoptera_acutorostrata.KI537095.1                  26383581  0 +  51448160 C
e Artibeus_jamaicensis.ArtJam_scaffold_41619                10440 261 -     29036 I
e Antilocapra_americana.AntAmePen_scaffold_27338             2548  0 +     55446 C
e Anoura_caudifer.AnoCau_scaffold_422                      392020 257 -    631301 I
e Ammotragus_lervia.NIVO01013474.1                        3525117  0 +   4113121 C
e Ailurus_fulgens.LNAC01000003.1                          7099380  0 -  16596857 C
e Ailuropoda_melanoleuca.LNAT01000321.1                  10662594  0 +  23371972 C
e Acinonyx_jubatus.LLWD01000356.1                         2038912  0 +   3721120 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           20901  0 -    119109 C
e Glis_glis.GliGli_scaffold_79770                           15993  0 -     18683 C
e Zapus_hudsonius.ZapHud_scaffold_64392                     20218  0 -     20485 C
e Jaculus_jaculus.JH725517.1                              8577088  0 +  11848649 C
e Hylobates_pileatus_a.tarseq_592                             35773 13 -     60944 I
e Allactaga_bullata.AllBul_scaffold_70162                   21404  0 -     22067 C
e Galeopterus_variegatus.GalVar_scaffold_354               159184  0 +    324696 C
e Microtus_ochrogaster.CM001673.1                        22823881  0 -  98408828 C
e Xerus_inauris.XerIna_scaffold_7898                       128400 2868 -    134049 I
e Varecia_variegata.k141_775891                             27530  0 -     33872 C
e Varecia_rubra.k141_432109                                  7995  0 -     20643 C
e Tupaia_tana.TupTan_flattened_line_68454                    9338  0 +     13056 C
e Tupaia_chinensis.KB320831.1                             2797404  0 -   3938065 C
e Trachypithecus_pileatus.k141_1022309                       5226  0 +     13828 C
e Trachypithecus_phayrei.ctg3                            44662914  0 -  44834318 C
e Trachypithecus_obscurus.k141_1115109                       8130  0 -     28054 C
e Trachypithecus_melamera.k141_699241                        2986  0 -     24393 C
e Trachypithecus_leucocephalus.k141_381681                   3005  0 +     12481 C
e Trachypithecus_laotum.k141_760702                          4719  0 +     14371 C
e Trachypithecus_hatinhensis.k141_504423                     6067  0 -     15592 C
e Trachypithecus_germaini.k141_868450                        3883  0 -     11566 C
e Trachypithecus_geei.k141_670367                           46082  0 -     54611 C
e Trachypithecus_francoisi.k141_768164                       4689  0 -     14244 C
e Trachypithecus_cristatus.k141_1011511                      5261  0 -     12939 C
e Trachypithecus_crepusculus.k141_1588528                   23360  0 -     32910 C
e Trachypithecus_auratus.k141_738098                        29800  0 +     38948 C
e Tarsius_wallacei.k141_48636                               60532 3805 +     65473 I
e Tarsius_lariang.k141_609102                               27216 3812 +     42269 I
e Spermophilus_dauricus.KZ294190.1                        2243603  0 +   2842873 C
e Sigmodon_hispidus.SigHis_scaffold_11332                  104689  0 -    120886 C
e Semnopithecus_vetulus.k141_1143185                        16479  0 +     30600 C
e Semnopithecus_schistaceus.k141_387461                     33457  0 +     42640 C
e Semnopithecus_priam.k141_410937                           40312  0 +     46263 C
e Semnopithecus_johnii.k141_785014                         121532  0 +    130994 C
e Semnopithecus_hypoleucos.k141_761524                      11528  0 +     20762 C
e Semnopithecus_entellus.k141_1572367                        6153  0 +     15331 C
e Rhinopithecus_strykeri.ctg4                            44859307  0 -  45163003 C
e Rhinopithecus_bieti.k119_554384                            2917  0 -     17045 C
e Rattus_norvegicus.chr11                                13917336  0 +  90463843 C
e Pygathrix_nigripes_a.k141_101123                             8537  0 +     18040 C
e Pygathrix_nigripes_b.ctg79                                 6809148  0 +   6970761 C
e Pygathrix_cinerea.k141_374971                             32651  0 +     56732 C
e Psammomys_obesus.NESX01026517.1                           37921  0 +     77221 C
e Propithecus_verreauxi.k141_158021                         42002  0 -     48185 C
e Propithecus_tattersalli.k141_907138                       19738  0 -     53241 C
e Propithecus_perrieri.k141_7554                            20103  0 +     27322 C
e Propithecus_edwardsi.k141_1317105                         38180  0 -     44753 C
e Propithecus_diadema.k141_577245                           45793  0 +     52369 C
e Propithecus_coronatus.k141_1353159                         6446  0 +     11805 C
e Propithecus_coquerelli.NW_012147863.1                     20390  0 -     30946 C
e Prolemur_simus.MPIZ01000048.1                           6851355  0 +  12164890 C
e Presbytis_mitrata.k141_860013                              8661  0 +     14865 C
e Presbytis_comata.k141_672698                               8546  0 -     15069 C
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000036.1               26743271  0 +  26888534 C
e Piliocolobus_kirkii.k141_929665                            4788  0 +      7694 C
e Piliocolobus_gordonorum.k141_1270531                       5421  0 -     17985 C
e Piliocolobus_badius.k141_1987485                           4802  0 -      5908 C
e Peromyscus_maniculatus.KI615518.1                       4955125  0 -   8017169 C
e Perodicticus_potto.k141_1136815                           10207  0 +     61070 C
e Perodicticus_ibeanus.k141_117958                           9080  0 -     23713 C
e Otolemur_garnettii.GL873528.1                          18011493  0 -  38779656 C
e Otolemur_crassicaudatus.k141_505435                        3512  0 -     53940 C
e Onychomys_torridus.OnyTor_scaffold_12578                  42756  0 +     62360 C
e Ondatra_zibethicus.OndZib_scaffold_6821                  130071  0 +    145789 C
e Octodon_degus.JH651621.1                                3687420 1881 +  10294119 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65678347  0 +  89412551 C
e Nycticebus_coucang.k141_771591                            13545  0 +     16181 C
e Nycticebus_bengalensis.LG16                            65570136  0 -  95554990 C
e Nasalis_larvatus.k141_153429                              11264  0 +     48152 C
e Nannospalax_galili.KL201303.1                            119867  0 +    362372 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     91920 1922 -    117718 I
e Muscardinus_avellanarius.MusAve_scaffold_9643             14525  0 +     98495 C
e Mus_spretus.CM004110.1                                 74336277  0 +  97876770 C
e Mus_pahari.LT608305.1                                  67559927  0 +  89017189 C
e Mus_musculus.chr16                                     75493550  0 +  98207768 C
e Mus_caroli.LT608236.1                                  70771497  0 +  92629107 C
e Mirza_zaza.k141_593947                                     4089  0 -     12809 C
e Microcebus_murinus.CM007691.1                          16513035  0 +  47401472 C
e Mesocricetus_auratus.KB708139.1                         1051192  0 -  26018355 C
e Meriones_unguiculatus.MerUng_scaffold_52233               15570  0 +     15977 C
e Marmota_marmota.CZRN01000005.1                         36877588  0 +  64221397 C
e Loris_tardigradus.ctg97                                 3781302  0 +   6799190 C
e Loris_lydekkerianus.k141_550999                           13563  0 +     84689 C
e Lepilemur_septentrionalis.k141_710646                      1084  0 -     13103 C
e Lepilemur_ruficaudatus.k141_574529                        35037  0 -     38897 C
e Lepilemur_dorsalis.k141_134267                            56656  0 +     63517 C
e Lepilemur_ankaranensis.k141_884009                        27292  0 +     39228 C
e Lemur_catta.scaffold_1                                258409979  0 - 285822530 C
e Indri_indri.k141_2197838                                    116  0 +      3484 C
e Ictidomys_tridecemlineatus.JH393315.1                   7129728  0 +  13083262 C
e Hystrix_cristata.HysCri_scaffold_50788                     7688 1865 +     22540 I
e Heterocephalus_glaber.JH602058.1                        2560252  0 +  31725842 C
e Hapalemur_occidentalis.k141_797938                        48308  0 -     54384 C
e Hapalemur_meridionalis.k141_186231                        31681  0 -     42470 C
e Hapalemur_griseus.k141_1387522                             8432  0 +     56096 C
e Hapalemur_gilberti.k141_279011                             3105  0 -     11661 C
e Hapalemur_alaotrensis.k141_1280836                         4627  0 +     10286 C
e Graphiurus_murinus.GraMur_scaffold_4493                   79386  0 +    118900 C
e Galagoides_demidoff.k141_1769638                          13144  0 +     27357 C
e Galago_senegalensis.k141_964197                           16038  0 -     43889 C
e Galago_moholi.ctg555                                     213680  0 -    847004 C
e Fukomys_damarensis.KN123630.1                          13895732  0 -  19261668 C
e Eulemur_sanfordi.k141_186399                              18623  0 -     29447 C
e Eulemur_rufus.k141_1620292                                35891  0 +     46535 C
e Eulemur_rubriventer.k141_411740                           21157  0 +     26808 C
e Eulemur_mongoz.k141_825972                                18693  0 +     27497 C
e Eulemur_macaco.k141_747087                                 2027  0 -     19505 C
e Eulemur_fulvus.k141_653297                                14043  0 +    109717 C
e Eulemur_flavifrons.k141_903901                            10560  0 +     60246 C
e Eulemur_coronatus.k141_3240342                            14235  0 +     36558 C
e Eulemur_collaris.k141_1015201                              1102  0 -      4292 C
e Eulemur_albifrons.k141_715837                              7832  0 +     13586 C
e Ellobius_talpinus.LOJH01198462.1                           1213  0 -      1901 C
e Ellobius_lutescens.LOEQ01003611.1                        243471  0 -    369425 C
e Dolichotis_patagonum.DolPat_scaffold_14102                39604  0 -     73477 C
e Daubentonia_madagascariensis.ctg11                     16847687  0 +  31942871 C
e Dasyprocta_punctata.DasPun_flattened_line_634             61584  0 -    236241 C
e Cuniculus_paca.CunPac_flattened_line_16637                20446  0 +     26546 C
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 32592 1717 -     67205 I
e Ctenodactylus_gundi.CteGun_scaffold_447                  213664  0 -    956709 C
e Cricetulus_griseus.LT883672.1                          53034667  0 +  72327488 C
e Cricetomys_gambianus.CriGam_scaffold_949                 282297  0 -    399297 C
e Colobus_polykomos.k141_1406057                            19335  0 +     23629 C
e Colobus_guereza.LG08                                  147667351  0 + 156195979 C
e Colobus_angolensis.KN985967.1                          10889423  0 +  10971483 C
e Chinchilla_lanigera.JH721867.1                         15963245 964 +  43084221 I
e Cheirogaleus_medius.k141_133808                           10871  0 +     13308 C
e Cheirogaleus_major.k141_1157592                           61827  0 -     68416 C
e Cephalopachus_bancanus.k141_702587                         8788 3391 +     21754 I
e Cavia_tschudii.CavTsc_scaffold_488                       177725 1742 +    436027 I
e Cavia_porcellus.DS562889.1                             15799553 1742 -  24440124 I
e Cavia_aperea.AVPZ01000278.1                            15787615 1741 -  24422027 I
e Carlito_syrichta.NW_007248099.1                          309764 3411 +    345090 I
e Avahi_peyrierasi.k141_798820                               3156  0 +      6337 C
e Avahi_laniger.k141_2840928                                 9540  0 -     16375 C
e Arctocebus_calabarensis.k141_587554                        4710  0 +      9265 C
e Acomys_cahirinus.AcoCah_scaffold_1625                    117433  0 -    189883 C
e Pan_paniscus.CM003386.1                               127578173  0 - 205426864 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               17165 1 +    209709 T
s Acinonyx_jubatus.LLWD01000356.1                         2038912 1 +   3721120 t
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10662594 1 +  23371972 t
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7099380 1 -  16596857 t
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   5028 1 -     60446 t
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         5745 1 -     29318 t
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         4683 1 +     38766 t
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          5639 1 -     80423 t
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                               630 1 +     19852 T
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                2886 1 -     12443 T
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                              185 1 +      5070 T
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_1268583                               10518 1 -     10533 T
i Alouatta_juara.k141_1268583                           C 0 C 0
s Alouatta_macconnelli.k141_2318944                          2669 1 -     24210 T
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           29251 1 -     30219 T
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_405616                              5087 1 +     16794 T
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                             219 1 -      1470 T
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             4364 1 -      9835 T
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3525117 1 +   4113121 t
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             2548 1 +     55446 t
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 65979 1 +     78111 t
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            8925 1 +     22701 t
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5752883 1 +   9889416 T
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             9481 1 -    104377 t
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               9488 1 +     23246 t
i Aotus_vociferans.k141_718647                          C 0 C 0
s Arctocebus_calabarensis.k141_587554                        4710 1 +      9265 T
i Arctocebus_calabarensis.k141_587554                   C 0 I 1084
s Ateles_geoffroyi_b.tarseq_2582                             9542772 1 +  39197703 t
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             64045 1 +     85812 t
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                15058 1 +     89302 t
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             19559 1 -     58268 t
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             67553 1 +    119057 t
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               9522 1 -     25888 t
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                 9540 1 -     16375 C
i Avahi_laniger.k141_2840928                            C 0 I 1029
s Avahi_peyrierasi.k141_798820                               3156 1 +      6337 C
i Avahi_peyrierasi.k141_798820                          C 0 I 1029
s Balaenoptera_acutorostrata.KI537095.1                  26383581 1 +  51448160 t
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        8754 1 -     13118 t
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   47579 1 -     72089 t
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   301727 1 -   6870073 t
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22955825 1 + 161108492 t
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     418090 1 +    998990 t
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22664479 1 + 158972876 t
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               674242 1 +   1914593 t
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               117428 1 -    171031 t
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 16448 1 +    125063 t
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                18495 1 -    216513 t
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       11038 1 -    134917 t
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3222722 1 -   8989139 t
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           400424 1 -  15254737 t
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2976160 1 +   6889770 t
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11525758 1 +  39901454 t
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   20732 1 +     87036 t
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11272441 1 -  35597290 t
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11095152 1 +  39895921 t
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16461937 1 -  44759192 t
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21330197 1 + 157394656 t
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135711414 1 - 157403528 t
i Capra_hircus.CM004562.1                               C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   162277 1 -    276539 t
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18894260 1 -  29618158 t
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                11804 1 -     26817 t
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                16047 1 +     25043 t
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4367163 1 +   7569818 t
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         6920 1 -      9338 t
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6558969 1 +   6739814 T
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      30446 1 +     60454 t
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          5650 1 -     21101 t
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         62960 1 -    107033 t
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        5822 1 -     17608 t
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          2986 1 +     45019 t
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           3052 1 +     15177 t
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          5870 1 +     16677 t
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           28058 1 +     35983 t
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11994589 1 +  12117833 t
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46481350 1 +  46592721 t
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      44901 1 -     45581 t
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       5882 1 +     35577 t
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        5676 1 -     25661 t
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        5634 1 -     17744 t
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        25219 1 +     37128 t
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           61827 1 -     68416 c
i Cheirogaleus_major.k141_1157592                       C 0 I 970
s Cheirogaleus_medius.k141_133808                           10871 1 +     13308 c
i Cheirogaleus_medius.k141_133808                       C 0 I 1027
s Cheracebus_lucifer.k141_619653                             9085 1 -     18223 T
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                               824 1 +    188999 T
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           45123 1 +     57117 T
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          49802 1 +     54541 T
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chiropotes_israelita.k141_1189915                         74607 1 +    196370 t
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          18788 1 +     40510 t
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15143403 1 -  15256731 t
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      37867 1 -     53260 t
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101148426 1 + 101219884 T
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Condylura_cristata.JH655880.1                          60621791 1 +  78930452 T
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         1339 1 -      5782 T
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    I 2 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              1226 1 -     22648 T
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            56919 1 -     70449 t
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16847687 1 +  31942871 C
i Daubentonia_madagascariensis.ctg11                    C 0 I 1038
s Delphinapterus_leucas.KZ290064.1                       80040207 1 -  96802777 t
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 325812 1 +    993696 t
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   6452 1 +    151128 t
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1495795 1 +   1727528 t
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Enhydra_lutris.KZ291749.1                              85876835 1 +  99434291 t
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Equus_asinus.JREZ01000062.1                             5856176 1 -   7175178 c
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13354676 1 +  41866177 c
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          16166 1 +     92910 c
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erythrocebus_patas.Contig8                             48780437 1 -  48907691 t
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          318424 1 +    330699 t
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             64881 1 +     89355 t
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              7832 1 +     13586 C
i Eulemur_albifrons.k141_715837                         C 0 I 1047
s Eulemur_collaris.k141_1015201                              1102 1 -      4292 C
i Eulemur_collaris.k141_1015201                         C 0 I 1040
s Eulemur_coronatus.k141_3240342                            14235 1 +     36558 C
i Eulemur_coronatus.k141_3240342                        C 0 I 1040
s Eulemur_flavifrons.k141_903901                            10560 1 +     60246 C
i Eulemur_flavifrons.k141_903901                        C 0 I 1040
s Eulemur_fulvus.k141_653297                                14043 1 +    109717 C
i Eulemur_fulvus.k141_653297                            C 0 I 1040
s Eulemur_macaco.k141_747087                                 2027 1 -     19505 C
i Eulemur_macaco.k141_747087                            C 0 I 1041
s Eulemur_mongoz.k141_825972                                18693 1 +     27497 C
i Eulemur_mongoz.k141_825972                            C 0 I 1047
s Eulemur_rubriventer.k141_411740                           21157 1 +     26808 C
i Eulemur_rubriventer.k141_411740                       C 0 I 1039
s Eulemur_rufus.k141_1620292                                35891 1 +     46535 C
i Eulemur_rufus.k141_1620292                            C 0 I 1040
s Eulemur_sanfordi.k141_186399                              18623 1 -     29447 C
i Eulemur_sanfordi.k141_186399                          C 0 I 1047
s Felis_catus.CM001386.2                                129898331 1 - 159252932 t
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129285299 1 - 158578461 t
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 26394 1 +     52776 t
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Galago_moholi.ctg555                                     213680 1 -    847004 T
i Galago_moholi.ctg555                                  C 0 I 999
s Galago_senegalensis.k141_964197                           16038 1 -     43889 T
i Galago_senegalensis.k141_964197                       C 0 I 999
s Galagoides_demidoff.k141_1769638                          13144 1 +     27357 T
i Galagoides_demidoff.k141_1769638                      C 0 I 999
s Galeopterus_variegatus.GalVar_scaffold_354               159184 1 +    324696 t
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    185599 1 -    189561 t
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Gorilla_beringei.k141_111300                               8876 1 -     14630 t
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119655976 1 - 195582420 t
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         4627 1 +     10286 C
i Hapalemur_alaotrensis.k141_1280836                    C 0 I 1036
s Hapalemur_gilberti.k141_279011                             3105 1 -     11661 C
i Hapalemur_gilberti.k141_279011                        C 0 I 1036
s Hapalemur_griseus.k141_1387522                             8432 1 +     56096 C
i Hapalemur_griseus.k141_1387522                        C 0 I 1036
s Hapalemur_meridionalis.k141_186231                        31681 1 -     42470 C
i Hapalemur_meridionalis.k141_186231                    C 0 I 1036
s Hapalemur_occidentalis.k141_797938                        48308 1 -     54384 C
i Hapalemur_occidentalis.k141_797938                    C 0 I 1035
s Helogale_parvula.HelPar_flattened_line_22962              22066 1 +     53719 t
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                32467 1 -     91191 t
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_13814               68359 1 -    108006 T
i Heterohyrax_brucei.HetBruBak_scaffold_13814           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              150208 1 +    277961 t
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      282610 1 -    477199 t
i Hipposideros_armiger.JXIK01001085.1                   I 2 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959                379 1 +     26078 t
i Hipposideros_galeritus.HipGal_scaffold_52959          I 2 C 0
s Hoolock_leuconedys.ctg315                                   349861 1 +    431944 T
i Hoolock_leuconedys.ctg315                                n 80 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 22640 1 -     67322 t
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hylobates_abbotti.k141_1816750                             1338 1 +      3202 t
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1633646                              1308 1 -      2102 t
i Hylobates_agilis.k141_1633646                         C 0 C 0
s Hylobates_klossii.k141_468230                              2824 1 +      5464 t
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14628173 1 -  25970782 t
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                             724 1 +      4161 t
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Indri_indri.k141_2197838                                    116 1 +      3484 C
i Indri_indri.k141_2197838                              C 0 I 1026
s Inia_geoffrensis.IniGeo_flattened_line_66725              12419 1 +     17520 t
i Inia_geoffrensis.IniGeo_flattened_line_66725          I 2 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               27000 1 +     37189 t
i Kogia_breviceps.KogBre_flattened_line_35920           I 2 C 0
s Lagothrix_lagothricha.k141_12968                          53641 1 -    147782 t
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lemur_catta.scaffold_1                                258409979 1 - 285822530 C
i Lemur_catta.scaffold_1                                C 0 I 1036
s Lepilemur_ankaranensis.k141_884009                        27292 1 +     39228 c
i Lepilemur_ankaranensis.k141_884009                    C 0 I 1028
s Lepilemur_dorsalis.k141_134267                            56656 1 +     63517 c
i Lepilemur_dorsalis.k141_134267                        C 0 I 1028
s Lepilemur_ruficaudatus.k141_574529                        35037 1 -     38897 c
i Lepilemur_ruficaudatus.k141_574529                    C 0 I 1027
s Lepilemur_septentrionalis.k141_710646                      1084 1 -     13103 c
i Lepilemur_septentrionalis.k141_710646                 C 0 I 1026
s Leptonychotes_weddellii.KB714749.1                      3090826 1 -   3498232 t
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lipotes_vexillifer.KE558548.1                            139371 1 +   3060487 t
i Lipotes_vexillifer.KE558548.1                         I 2 C 0
s Lophocebus_aterrimus.ctg55                             19252057 1 +  19376315 t
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           13563 1 +     84689 T
i Loris_lydekkerianus.k141_550999                       C 0 I 1019
s Loris_tardigradus.ctg97                                 3781302 1 +   6799190 T
i Loris_tardigradus.ctg97                               C 0 I 1019
s Loxodonta_africana.GL010040.1                          20597894 1 -  62548349 t
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11094608 1 +  39895028 t
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             23808 1 +     74745 t
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12710269 1 +  12821369 t
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                2843 1 -     26467 t
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           50714 1 +     63263 t
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 2824 1 -     26361 t
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 6014 1 -      7381 t
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  49243 1 -     79256 t
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196039341 1 + 196197964 T
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11449511 1 +  11645122 T
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   8197 1 -     46448 t
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                5859 1 -     13212 t
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 19540 1 -     55006 t
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43844655 1 +  43892939 t
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               20823 1 -     24607 t
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               8194 1 -     27140 t
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43441230 1 -  43563597 t
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4454034 1 -   4543643 t
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            149232 1 +    252755 t
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             39380 1 +     58827 t
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       65028 1 -    234502 t
i Megaderma_lyra.MegLyr_scaffold_3562                   I 2 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             5726 1 -     87323 t
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    2005 1 -     12939 t
i Mesoplodon_bidens.MesBid_scaffold_96348               I 2 C 0
s Microcebus_murinus.CM007691.1                          16513035 1 +  47401472 A
i Microcebus_murinus.CM007691.1                         C 0 I 1043
s Microgale_talazaci.MicTal_scaffold_34660                  40768 1 -     48017 t
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         5776 1 +     29742 t
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        16322 1 -    104932 t
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     4089 1 -     12809 C
i Mirza_zaza.k141_593947                                C 0 I 671
s Monodon_monoceros.MonMon_M_scaffold_5598                 149800 1 +    154973 t
i Monodon_monoceros.MonMon_M_scaffold_5598              I 2 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  5813 1 -     19904 t
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  149746 1 -    168139 t
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Mustela_putorius.JH417978.1                             4427567 1 -  28371801 t
i Mustela_putorius.JH417978.1                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4489721 1 -  14209539 t
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3954391 1 -   4490290 t
i Neophocaena_asiaeorientalis.KZ688543.1                I 2 C 0
s Nomascus_annamensis.k141_1817463                            464 1 -      1070 t
i Nomascus_annamensis.k141_1817463                      C 0 C 0
s Nomascus_concolor.k141_70405                                464 1 +      1153 t
i Nomascus_concolor.k141_70405                          C 0 I 21
s Nomascus_gabriellae.k141_1400361                            399 1 -      2203 t
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_1022                             418 1 -     11638 t
i Nomascus_siki_b.tarseq_1022                       I 37 C 0
s Nomascus_siki_a.k141_421408                                   309 1 +     16235 T
i Nomascus_siki_a.k141_421408                             C 0 I 21
s Nyctereutes_procyonoides.CAJHUB010000786.1                37467 1 +   3668941 t
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65570136 1 -  95554990 T
i Nycticebus_bengalensis.LG16                           C 0 I 1009
s Nycticebus_coucang.k141_771591                            13545 1 +     16181 T
i Nycticebus_coucang.k141_771591                        C 0 I 1009
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65678347 1 +  89412551 T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 I 1010
s Odobenus_rosmarus.KB229369.1                             684428 1 -   3126709 t
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1083245 1 +   1425656 t
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         41334 1 +     78940 t
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Orcinus_orca.KB316965.1                                 7228067 1 -   7562323 t
i Orcinus_orca.KB316965.1                               I 2 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              63439 1 -     66828 T
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      314612 1 -    505867 t
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        3512 1 -     53940 G
i Otolemur_crassicaudatus.k141_505435                   C 0 I 990
s Otolemur_garnettii.GL873528.1                          18011493 1 -  38779656 G
i Otolemur_garnettii.GL873528.1                         C 0 I 980
s Ovis_aries.CM001582.2                                 134082257 1 - 275406953 t
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      83485 1 +    140051 t
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_troglodytes.KZ622857.1                               332925 1 +    772158 T
i Pan_troglodytes.KZ622857.1                            I 41 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  39322 1 +    295523 t
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3643137 1 +  18214204 t
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5032785 1 -   6340057 t
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1071126 1 -   1292953 t
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188160019 1 - 188283584 T
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              3109 1 +     25005 t
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47517391 1 +  47705337 t
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 71382 1 -    104429 t
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    9914 1 +     14967 t
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 5779 1 -      7628 t
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    120818 1 -    135482 t
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                           9080 1 -     23713 T
i Perodicticus_ibeanus.k141_117958                      C 0 I 1087
s Perodicticus_potto.k141_1136815                           10207 1 +     61070 T
i Perodicticus_potto.k141_1136815                       C 0 I 1100
s Phocoena_phocoena.PhoPho_flattened_line_53071              2532 1 +      8220 t
i Phocoena_phocoena.PhoPho_flattened_line_53071         I 2 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           9000 1 +     21690 t
i Platanista_gangetica.PlaMin_flattened_line_72990      I 2 C 0
s Plecturocebus_bernhardi.k141_959214                       25734 1 +     44506 t
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        25947 1 +     67491 t
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      16186 1 -     98129 t
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     25786 1 +    147771 t
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         2422 1 -     43940 t
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          6505 1 -     55515 t
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         25859 1 +    152463 t
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       3667 1 -    119457 t
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         15582 1 +    134592 t
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          26169 1 -     75465 t
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              190757 1 -    373494 T
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19811404 1 +  19899266 t
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_11797                50321 1 -     88779 T
i Procavia_capensis.ProCapCap_scaffold_11797            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6851355 1 +  12164890 C
i Prolemur_simus.MPIZ01000048.1                         C 0 I 1034
s Propithecus_coquerelli.NW_012147863.1                     20390 1 -     30946 C
i Propithecus_coquerelli.NW_012147863.1                 C 0 I 1029
s Propithecus_coronatus.k141_1353159                         6446 1 +     11805 c
i Propithecus_coronatus.k141_1353159                    C 0 I 1029
s Propithecus_diadema.k141_577245                           45793 1 +     52369 c
i Propithecus_diadema.k141_577245                       C 0 I 1030
s Propithecus_edwardsi.k141_1317105                         38180 1 -     44753 c
i Propithecus_edwardsi.k141_1317105                     C 0 I 1030
s Propithecus_perrieri.k141_7554                            20103 1 +     27322 c
i Propithecus_perrieri.k141_7554                        C 0 I 1030
s Propithecus_tattersalli.k141_907138                       19738 1 -     53241 c
i Propithecus_tattersalli.k141_907138                   C 0 I 1029
s Propithecus_verreauxi.k141_158021                         42002 1 -     48185 c
i Propithecus_verreauxi.k141_158021                     C 0 I 1029
s Pteronura_brasiliensis.PteBra_flattened_line_1343        249686 1 -    344369 t
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Puma_concolor.QAVW01000427.1                          131539433 1 - 161321710 t
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                20109 1 +     68503 t
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1792214 1 +   2252614 t
i Rhinolophus_sinicus.LVEH01000179.1                    I 2 C 0
s Saiga_tatarica.SaiTat_scaffold_1069354                      105 1 -       709 t
i Saiga_tatarica.SaiTat_scaffold_1069354                C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15676188 1 -  43202129 T
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        8101 1 +     34089 t
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              8043 1 -     60842 t
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              8136 1 +     67014 t
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              8114 1 +     60816 t
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 8051 1 -     76454 t
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17344846 1 -  30362882 t
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         24167 1 -     62485 t
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   39231 1 -    114521 g
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            23185 1 +    739146 t
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17769647 1 -  27805282 t
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             238244 1 -    276980 t
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            32401 1 +     62062 t
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        18431 1 -  13920577 t
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      810399 1 +   1148477 t
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  61041 1 +     99546 t
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194011552 1 - 194193292 T
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   9151 1 +     90398 T
i Tragulus_javanicus.TraJav_scaffold_14717              I 2 C 0
s Trichechus_manatus.JH594618.1                          16088878 1 +  31416278 t
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2797404 1 -   3938065 G
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    9338 1 +     13056 G
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69316796 1 -  96451834 t
i Tursiops_truncatus.MRVK01000923.1                     I 2 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   9768 1 +     10241 C
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6519892 1 +  28682327 t
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  7995 1 -     20643 C
i Varecia_rubra.k141_432109                             C 0 I 1036
s Varecia_variegata.k141_775891                             27530 1 -     33872 C
i Varecia_variegata.k141_775891                         C 0 I 1036
s Vicugna_pacos.KN269600.1                                1527832 1 -   2331223 t
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                143835 1 -    281493 t
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        219280 1 -    227762 t
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            1540 1 -     13665 t
i Ziphius_cavirostris.ZipCav_flattened_line_60625       I 2 C 0
e Eptesicus_fuscus.JH977687.1                             4708429 237 +   6522550 I
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Petromus_typicus.PetTyp_scaffold_33007                    16921 0 -     36578 C
e Dinomys_branickii.DinBra_scaffold_1996                   158442 1030 +    228994 I
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           4051 456 -      6963 I
e Oryctolagus_cuniculus.CM000803.1                      141878516 2929 + 163896628 I
e Ochotona_princeps.JH802095.1                            4996729 2205 -  23139505 I
e Lepus_americanus.LepAme_scaffold_62849                    15480 2946 +     22452 I
e Perognathus_longimembris.PerPac_flattened_line_19359       1614 38 +     49596 I
e Dipodomys_stephensi.DipSte_scaffold_84338                  1789 28 -     11986 I
e Dipodomys_ordii.KN672545.1                              3659429 30 +   4240102 I
e Tonatia_saurophila.TonSau_scaffold_3334                  137563 275 -    259118 I
e Tamandua_tetradactyla.TamTet_scaffold_26877               16259 379 +     45698 I
e Tadarida_brasiliensis.TadBra_scaffold_61492                1822 242 +     20549 I
e Sus_scrofa.CM000824.4                                 189273670 1086 + 218635234 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Pteronotus_parnellii.KE867983.1                            5588 252 -     27784 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             6589 379 -      8794 I
e Myotis_myotis.MyoMyo_scaffold_6123                        13515 236 +     66751 I
e Myotis_lucifugus.GL429887.1                             3468272 238 -   3747815 I
e Myotis_davidii.KB114863.1                               5022194 233 +   6462685 I
e Myotis_brandtii.KE161952.1                               970769 237 +   8389877 I
e Murina_feae.MurFea_scaffold_2254                          23900 236 -    100666 I
e Mormoops_blainvillei.MorMeg_scaffold_2952                162937 259 +    265003 I
e Miniopterus_schreibersii.MinSch_scaffold_24116            36998 214 +     45743 I
e Miniopterus_natalensis.LDJU01000022.1                   8212509 213 +  10048721 I
e Micronycteris_hirsuta.MicHir_scaffold_37978               24387 274 -     32043 I
e Lasiurus_borealis.LasBor_scaffold_59542                    5042 241 +     26176 I
e Elephantulus_edwardii.JH947210.1                        7830035 1277 +  15467074 I
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Echinops_telfairi.JH980316.1                           22999931 2 -  44670279 I
e Desmodus_rotundus.KZ672188.1                           18700517 262 -  18957592 I
e Dasypus_novemcinctus.JH568778.1                          185121 383 -   6883506 I
e Choloepus_hoffmanni.KN194586.1                           763329 503 +    964067 I
e Choloepus_didactylus.ChoDid_scaffold_36182                18024 504 -     21363 I
e Carollia_perspicillata.CarPer_scaffold_4436               61226 261 +     67245 I
e Artibeus_jamaicensis.ArtJam_scaffold_41619                10440 261 -     29036 I
e Anoura_caudifer.AnoCau_scaffold_422                      392020 257 -    631301 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           20901 0 -    119109 C
e Glis_glis.GliGli_scaffold_79770                           15993 0 -     18683 C
e Zapus_hudsonius.ZapHud_scaffold_64392                     20218 0 -     20485 C
e Jaculus_jaculus.JH725517.1                              8577088 0 +  11848649 C
e Hylobates_pileatus_a.tarseq_592                             35773 13 -     60944 I
e Allactaga_bullata.AllBul_scaffold_70162                   21404 0 -     22067 C
e Microtus_ochrogaster.CM001673.1                        22823881 0 -  98408828 C
e Xerus_inauris.XerIna_scaffold_7898                       128400 2868 -    134049 I
e Trachypithecus_pileatus.k141_1022309                       5226 0 +     13828 C
e Trachypithecus_phayrei.ctg3                            44662914 0 -  44834318 C
e Trachypithecus_obscurus.k141_1115109                       8130 0 -     28054 C
e Trachypithecus_melamera.k141_699241                        2986 0 -     24393 C
e Trachypithecus_leucocephalus.k141_381681                   3005 0 +     12481 C
e Trachypithecus_laotum.k141_760702                          4719 0 +     14371 C
e Trachypithecus_hatinhensis.k141_504423                     6067 0 -     15592 C
e Trachypithecus_germaini.k141_868450                        3883 0 -     11566 C
e Trachypithecus_geei.k141_670367                           46082 0 -     54611 C
e Trachypithecus_francoisi.k141_768164                       4689 0 -     14244 C
e Trachypithecus_cristatus.k141_1011511                      5261 0 -     12939 C
e Trachypithecus_crepusculus.k141_1588528                   23360 0 -     32910 C
e Trachypithecus_auratus.k141_738098                        29800 0 +     38948 C
e Tarsius_wallacei.k141_48636                               60532 3805 +     65473 I
e Tarsius_lariang.k141_609102                               27216 3812 +     42269 I
e Spermophilus_dauricus.KZ294190.1                        2243603 0 +   2842873 C
e Sigmodon_hispidus.SigHis_scaffold_11332                  104689 0 -    120886 C
e Semnopithecus_vetulus.k141_1143185                        16479 0 +     30600 C
e Semnopithecus_schistaceus.k141_387461                     33457 0 +     42640 C
e Semnopithecus_priam.k141_410937                           40312 0 +     46263 C
e Semnopithecus_johnii.k141_785014                         121532 0 +    130994 C
e Semnopithecus_hypoleucos.k141_761524                      11528 0 +     20762 C
e Semnopithecus_entellus.k141_1572367                        6153 0 +     15331 C
e Rhinopithecus_strykeri.ctg4                            44859307 0 -  45163003 C
e Rhinopithecus_bieti.k119_554384                            2917 0 -     17045 C
e Rattus_norvegicus.chr11                                13917336 0 +  90463843 C
e Pygathrix_nigripes_a.k141_101123                             8537 0 +     18040 C
e Pygathrix_nigripes_b.ctg79                                 6809148 0 +   6970761 C
e Pygathrix_cinerea.k141_374971                             32651 0 +     56732 C
e Psammomys_obesus.NESX01026517.1                           37921 0 +     77221 C
e Presbytis_mitrata.k141_860013                              8661 0 +     14865 C
e Presbytis_comata.k141_672698                               8546 0 -     15069 C
e Pithecia_vanzolinii.k141_831006                           15424 0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514 0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521 0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292 0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093 0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038 0 +     78826 C
e Pithecia_albicans.k141_991845                             45662 0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000036.1               26743271 0 +  26888534 C
e Piliocolobus_kirkii.k141_929665                            4788 0 +      7694 C
e Piliocolobus_gordonorum.k141_1270531                       5421 0 -     17985 C
e Piliocolobus_badius.k141_1987485                           4802 0 -      5908 C
e Peromyscus_maniculatus.KI615518.1                       4955125 0 -   8017169 C
e Onychomys_torridus.OnyTor_scaffold_12578                  42756 0 +     62360 C
e Ondatra_zibethicus.OndZib_scaffold_6821                  130071 0 +    145789 C
e Octodon_degus.JH651621.1                                3687420 1881 +  10294119 I
e Nasalis_larvatus.k141_153429                              11264 0 +     48152 C
e Nannospalax_galili.KL201303.1                            119867 0 +    362372 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     91920 1922 -    117718 I
e Muscardinus_avellanarius.MusAve_scaffold_9643             14525 0 +     98495 C
e Mus_spretus.CM004110.1                                 74336277 0 +  97876770 C
e Mus_pahari.LT608305.1                                  67559927 0 +  89017189 C
e Mus_musculus.chr16                                     75493550 0 +  98207768 C
e Mus_caroli.LT608236.1                                  70771497 0 +  92629107 C
e Mesocricetus_auratus.KB708139.1                         1051192 0 -  26018355 C
e Meriones_unguiculatus.MerUng_scaffold_52233               15570 0 +     15977 C
e Marmota_marmota.CZRN01000005.1                         36877588 0 +  64221397 C
e Ictidomys_tridecemlineatus.JH393315.1                   7129728 0 +  13083262 C
e Hystrix_cristata.HysCri_scaffold_50788                     7688 1865 +     22540 I
e Heterocephalus_glaber.JH602058.1                        2560252 0 +  31725842 C
e Graphiurus_murinus.GraMur_scaffold_4493                   79386 0 +    118900 C
e Fukomys_damarensis.KN123630.1                          13895732 0 -  19261668 C
e Ellobius_talpinus.LOJH01198462.1                           1213 0 -      1901 C
e Ellobius_lutescens.LOEQ01003611.1                        243471 0 -    369425 C
e Dolichotis_patagonum.DolPat_scaffold_14102                39604 0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             61584 0 -    236241 C
e Cuniculus_paca.CunPac_flattened_line_16637                20446 0 +     26546 C
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 32592 1717 -     67205 I
e Ctenodactylus_gundi.CteGun_scaffold_447                  213664 0 -    956709 C
e Cricetulus_griseus.LT883672.1                          53034667 0 +  72327488 C
e Cricetomys_gambianus.CriGam_scaffold_949                 282297 0 -    399297 C
e Colobus_polykomos.k141_1406057                            19335 0 +     23629 C
e Colobus_guereza.LG08                                  147667351 0 + 156195979 C
e Colobus_angolensis.KN985967.1                          10889423 0 +  10971483 C
e Chinchilla_lanigera.JH721867.1                         15963245 964 +  43084221 I
e Cephalopachus_bancanus.k141_702587                         8788 3391 +     21754 I
e Cavia_tschudii.CavTsc_scaffold_488                       177725 1742 +    436027 I
e Cavia_porcellus.DS562889.1                             15799553 1742 -  24440124 I
e Cavia_aperea.AVPZ01000278.1                            15787615 1741 -  24422027 I
e Carlito_syrichta.NW_007248099.1                          309764 3411 +    345090 I
e Acomys_cahirinus.AcoCah_scaffold_1625                    117433 0 -    189883 C
e Pan_paniscus.CM003386.1                               127578173 0 - 205426864 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               17166 21 +    209709 ACATTGAG----CCAGGGA--T-----------A-A-AA-------A
s Acinonyx_jubatus.LLWD01000356.1                         2038913  8 +   3721120 atcctaag---------------------------------------
i Acinonyx_jubatus.LLWD01000356.1                       C 0 I 11
s Ailuropoda_melanoleuca.LNAT01000321.1                  10662595  8 +  23371972 acgctaag---------------------------------------
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 I 11
s Ailurus_fulgens.LNAC01000003.1                          7099381  8 -  16596857 atgctaag---------------------------------------
i Ailurus_fulgens.LNAC01000003.1                        C 0 I 11
s Allenopithecus_nigroviridis.k141_2469532                   5029 21 -     60446 acattgag----ccagaga--t-----------a-a-aa-------a
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         5746 21 -     29318 acattgag----ccagaga--t-----------a-a-aa-------a
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         4684 21 +     38766 acattgag----ccagaga--t-----------a-a-aa-------a
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          5640 21 -     80423 acattgag----ccagaga--t-----------a-a-aa-------a
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                               631 21 +     19852 ATGTTCAG----CCAGGGA--T-----------A-A-AA-------A
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                2887 21 -     12443 ATGTTCAG----CCAGGGA--T-----------A-A-AA-------A
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                              186 21 +      5070 ATGTTCAG----CCAGGGA--T-----------A-A-AA-------A
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_1268583                               10519 14 -     10533 ATGTTCAG----CCAGGG-----------------------------
i Alouatta_juara.k141_1268583                           C 0 N 0
s Alouatta_macconnelli.k141_2318944                          2670 21 -     24210 ATGTTCAG----CCAGGGA--T-----------A-A-AA-------A
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           29252 21 -     30219 ATGTTCAG----CCAGGGA--T-----------A-A-AA-------A
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_405616                              5088 21 +     16794 ATGTTCAG----CCAGGGA--T-----------A-A-AA-------A
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                             220 21 -      1470 ATGTTCAG----CCAGGGA--T-----------A-A-AA-------A
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             4365 21 -      9835 ATGTTCAG----CCAGGGA--T-----------A-A-AA-------A
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3525118 21 +   4113121 atattgag----ccaggat--t-----------a-aaaa--------
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             2549 21 +     55446 acattgag----ccaggat--t-----------a-aaaa--------
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 65980 21 +     78111 acattgag----ccaggga--t-----------a-a-aa-------a
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            8926 21 +     22701 acattgag----ccaggga--t-----------a-a-aa-------a
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5752884 21 +   9889416 ACATTGAG----CCAGGGA--T-----------A-A-AA-------A
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             9482 21 -    104377 acattgag----ccaggga--t-----------a-a-aa-------a
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               9489 21 +     23246 acattgag----ccaggga--t-----------a-a-aa-------a
i Aotus_vociferans.k141_718647                          C 0 C 0
s Arctocebus_calabarensis.k141_587554                        5795 21 +      9265 acattgaa----caagagg--t-----------a-a-aC-------A
i Arctocebus_calabarensis.k141_587554                   I 1084 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9542773 21 +  39197703 acgttgag----ccaggga--t-----------a-a-aa-------a
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             64046 21 +     85812 acgttgag----ccaggga--t-----------a-a-aa-------a
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                15059 21 +     89302 acgttgag----ccaggga--t-----------a-a-aa-------a
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             19560 21 -     58268 acgttgag----ccaggga--t-----------a-a-aa-------a
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             67554 21 +    119057 acgttgag----ccaggga--t-----------a-a-aa-------a
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               9523 21 -     25888 acgttgag----ccaggga--t-----------a-a-aa-------a
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                10570 21 -     16375 acattgag----cacagtg--t-----------a-a-aa-------a
i Avahi_laniger.k141_2840928                            I 1029 C 0
s Avahi_peyrierasi.k141_798820                               4186 21 +      6337 acattgag----cacagtg--t-----------a-a-aa-------a
i Avahi_peyrierasi.k141_798820                          I 1029 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26383582 21 +  51448160 acattgag----ccaggat--t-----------a-aaaa--------
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        8755 21 -     13118 acattgag----ccaggat--t-----------a-aaaa--------
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   47580 21 -     72089 acattgag----ccaggat--t-----------a-aaaa--------
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   301728 21 -   6870073 acactgag----ccaggat--t-----------a-aaaa--------
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22955826 21 + 161108492 acactgag----ccaggat--t-----------a-aaaa--------
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     418091 21 +    998990 acactgag----ccaggat--t-----------a-aaaa--------
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22664480 21 + 158972876 acactgag----ccaggat--t-----------a-aaaa--------
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               674243 21 +   1914593 acactgag----ccaggat--t-----------a-aaaa--------
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               117429 21 -    171031 acactgag----ccaggga--t-----------a-a-aa-------a
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 16449 21 +    125063 acactgag----ccaggga--t-----------a-a-aa-------a
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                18496 21 -    216513 acactgag----ccaggga--t-----------a-a-aa-------a
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       11039 21 -    134917 acactgag----ccaggga--t-----------a-a-aa-------a
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3222723 21 -   8989139 atactgag----ccagggt--c-----------a-aaaa--------
i Camelus_bactrianus.KN276303.1                         C 0 I 34
s Camelus_dromedarius.KN271192.1                           400425 21 -  15254737 atactgag----ccagggt--c-----------a-aaaa--------
i Camelus_dromedarius.KN271192.1                        C 0 I 34
s Camelus_ferus.KB016973.1                                2976161 21 +   6889770 atactgag----ccagggt--c-----------a-aaaa--------
i Camelus_ferus.KB016973.1                              C 0 I 34
s CanFam4.chr31                                          11525759  8 +  39901454 atgctaaa---------------------------------------
i CanFam4.chr31                                         C 0 I 11
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   20733  8 +     87036 atgctaaa---------------------------------------
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 I 11
s Canis_lupus_dingo.QKWQ01001993.1                       11272442  8 -  35597290 atgctaaa---------------------------------------
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 I 11
s Canis_lupus_familiaris.chr31                           11095153  8 +  39895921 atgctaaa---------------------------------------
i Canis_lupus_familiaris.chr31                          C 0 I 11
s Canis_lupus_orion.HG994411.1                           16461938  8 -  44759192 atgctaaa---------------------------------------
i Canis_lupus_orion.HG994411.1                          C 0 I 11
s Capra_aegagrus.CM003214.1                              21330198 21 + 157394656 acattgag----ccaggat--t-----------a-aaaa--------
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135711415 21 - 157403528 acattgag----ccaggat--t-----------a-aaaa--------
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          313175  6 +    345090 ---------------------t-----------a-a-aa-------a
i Carlito_syrichta.NW_007248099.1                       I 3411 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   162278 20 -    276539 acagtgt-----ccacggt--t-----------a-aaac--------
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18894261 21 -  29618158 acattgag----ccaggga--t-----------a-a-aa-------a
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                11805 21 -     26817 acattgag----ccaggga--t-----------a-a-aa-------a
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                16048 21 +     25043 acattgag----ccaggga--t-----------a-a-aa-------a
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                        12179  6 +     21754 ---------------------t-----------a-a-aa-------a
i Cephalopachus_bancanus.k141_702587                    I 3391 C 0
s Ceratotherium_simum.JH767818.1                          4367164 21 +   7569818 actttgag----ccagtga--t-----------a-aaaa--------
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         6921 21 -      9338 actttgag----ccagtga--t-----------a-aaaa--------
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6558970 21 +   6739814 ACATTGAG----CCAGAGA--T-----------A-A-AA-------A
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      30447 21 +     60454 acattgag----ccagaga--t-----------a-a-aa-------a
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          5651 21 -     21101 acattgag----ccagaga--t-----------a-a-aa-------a
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         62961 21 -    107033 acattgag----ccagaga--t-----------a-a-aa-------a
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        5823 21 -     17608 acattgag----ccagaga--t-----------a-a-aa-------a
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          2987 21 +     45019 acattgag----ccagaga--t-----------a-a-aa-------a
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           3053 21 +     15177 acattgag----ccaggga--t-----------a-a-aa-------a
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          5871 21 +     16677 acattgag----ccagaga--t-----------a-a-aa-------a
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           28059 21 +     35983 acattgag----ccagaga--t-----------a-a-aa-------a
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11994590 21 +  12117833 acattgag----ccagaga--t-----------a-a-aa-------a
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46481351 21 +  46592721 acattgag----ccagaga--t-----------a-a-aa-------a
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      44902 21 -     45581 acattgag----ccagaga--t-----------a-a-aa-------a
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       5883 21 +     35577 acattgag----ccagaga--t-----------a-a-aa-------a
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        5677 21 -     25661 acattgag----ccagaga--t-----------a-a-aa-------a
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        5635 21 -     17744 acattgag----ccagaga--t-----------a-a-aa-------a
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        25220 21 +     37128 acattgag----ccaggga--t-----------a-a-aa-------A
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           62798 21 -     68416 ACATTGAG----CAAAGGG--T-----------A-A-AA-------A
i Cheirogaleus_major.k141_1157592                       I 970 C 0
s Cheirogaleus_medius.k141_133808                           11899 21 +     13308 ACATTGAG----CAAAGGG--T-----------A-A-AA-------A
i Cheirogaleus_medius.k141_133808                       I 1027 C 0
s Cheracebus_lucifer.k141_619653                             9086 21 -     18223 ACATTGAA----CCAGGGA--T-----------A-A-AA-------A
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                               825 21 +    188999 ACATTGAA----CCAGGGA--T-----------A-A-AA-------A
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           45124 21 +     57117 ACATTGAA----CCAGGGA--T-----------A-A-AA-------A
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          49803 21 +     54541 ACATTGAA----CCAGGGA--T-----------A-A-AA-------A
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chiropotes_israelita.k141_1189915                         74608 21 +    196370 acactgag----ccagaga--t-----------a-a-aa-------a
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          18789 21 +     40510 acactgag----ccagaga--t-----------a-a-aa-------a
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15143404 21 -  15256731 acattgag----ccagaga--t-----------a-a-aa-------a
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      37868 21 -     53260 acattgag----ccagaga--t-----------a-a-aa-------a
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101148427 21 + 101219884 ACATTGAG----CCAGAGA--T-----------A-A-AA-------A
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Condylura_cristata.JH655880.1                          60621792 23 +  78930452 GTATGGtaa-acacatctg--a-----------a-g-ag--------
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         1340 20 -      5782 ACATTAAA----CCAGGGT--A-----------A-A-AA--------
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              1227 21 -     22648 ACATTGAG----ACAGAAGT-T-----------A-A-AA--------
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            56920  8 -     70449 atcctaat---------------------------------------
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 I 46
s Daubentonia_madagascariensis.ctg11                     16848726 21 +  31942871 acatcgag----caagggg--t-----------a-a-aa-------a
i Daubentonia_madagascariensis.ctg11                    I 1038 C 0
s Delphinapterus_leucas.KZ290064.1                       80040208 21 -  96802777 acattgag----ccaggat--t-----------a-aaaa--------
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 325813 21 +    993696 actttgag----ccagtga--t-----------a-aaaa--------
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   6453 21 +    151128 actttgag----ccagtga--t-----------a-aaaa--------
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1495796 21 +   1727528 acattgag----ccaggat--t-----------a-aaaa--------
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Enhydra_lutris.KZ291749.1                              85876836  8 +  99434291 atgctaag---------------------------------------
i Enhydra_lutris.KZ291749.1                             C 0 I 11
s Equus_asinus.JREZ01000062.1                             5856177 21 -   7175178 actttgag----ccagggg--t-----------a-aaaa--------
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13354677 21 +  41866177 actttgag----ccagggg--t-----------a-aaaa--------
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          16167 21 +     92910 actttgag----ccagggg--t-----------a-aaaa--------
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11540659  4 +  16010500 ---------------------------------a-a-aa--------
i Erinaceus_europaeus.JH835290.1                        N 0 C 0
s Erythrocebus_patas.Contig8                             48780438 21 -  48907691 acattgag----ccagaga--t-----------a-a-aa-------a
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          318425 21 +    330699 acattgag----ccaggat--t-----------a-aaaa--------
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             64882 21 +     89355 acattgag----ccaggat--t-----------a-aaaa--------
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              8880 21 +     13586 acattgaa----cacaggg--t-----------a-a-aa-------a
i Eulemur_albifrons.k141_715837                         I 1047 C 0
s Eulemur_collaris.k141_1015201                              2143 21 -      4292 acattgaa----cacaggg--t-----------a-a-aa-------a
i Eulemur_collaris.k141_1015201                         I 1040 C 0
s Eulemur_coronatus.k141_3240342                            15276 21 +     36558 acgttgaa----cacaggg--t-----------g-a-aa-------a
i Eulemur_coronatus.k141_3240342                        I 1040 C 0
s Eulemur_flavifrons.k141_903901                            11601 21 +     60246 acattgaa----cacaggg--t-----------a-a-aa-------a
i Eulemur_flavifrons.k141_903901                        I 1040 C 0
s Eulemur_fulvus.k141_653297                                15084 21 +    109717 acattgaa----cacaggg--t-----------a-a-aa-------a
i Eulemur_fulvus.k141_653297                            I 1040 C 0
s Eulemur_macaco.k141_747087                                 3069 21 -     19505 acattgaa----cacaggg--t-----------a-a-aa-------a
i Eulemur_macaco.k141_747087                            I 1041 C 0
s Eulemur_mongoz.k141_825972                                19741 21 +     27497 ACATTGAA----CACAGGG--T-----------A-G-AA-------A
i Eulemur_mongoz.k141_825972                            I 1047 C 0
s Eulemur_rubriventer.k141_411740                           22197 21 +     26808 acattgaa----cacaggG--T-----------A-A-GA-------A
i Eulemur_rubriventer.k141_411740                       I 1039 C 0
s Eulemur_rufus.k141_1620292                                36932 21 +     46535 acattgaa----cacaggg--t-----------a-a-aa-------a
i Eulemur_rufus.k141_1620292                            I 1040 C 0
s Eulemur_sanfordi.k141_186399                              19671 21 -     29447 acattgaa----cacaggg--t-----------a-a-aa-------a
i Eulemur_sanfordi.k141_186399                          I 1047 C 0
s Felis_catus.CM001386.2                                129898332  8 - 159252932 atcctaag---------------------------------------
i Felis_catus.CM001386.2                                C 0 I 11
s Felis_catus_fca126.CM031420.1                         129285300  8 - 158578461 atcctaag---------------------------------------
i Felis_catus_fca126.CM031420.1                         C 0 I 11
s Felis_nigripes.FelNig_flattened_line_8080                 26395  8 +     52776 atcctaag---------------------------------------
i Felis_nigripes.FelNig_flattened_line_8080             C 0 I 11
s Galago_moholi.ctg555                                     214680 21 -    847004 acattgaa----caagagg--t-----------a-a-aa-------a
i Galago_moholi.ctg555                                  I 999 C 0
s Galago_senegalensis.k141_964197                           17038 21 -     43889 acattgaa----caagagg--t-----------a-a-aa-------a
i Galago_senegalensis.k141_964197                       I 999 C 0
s Galagoides_demidoff.k141_1769638                          14144 21 +     27357 acattgaa----caagacg--t-----------a-a-aa-------a
i Galagoides_demidoff.k141_1769638                      I 999 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               159185 21 +    324696 acactgaa----ccagagg--t-----------a-a-aa-------a
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    185600 21 -    189561 acactgag----ccaggat--t-----------a-aaaa--------
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Gorilla_beringei.k141_111300                               8877 21 -     14630 acattgag----ccaggga--t-----------a-a-aa-------a
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119655977 21 - 195582420 acattgag----ccaggga--t-----------a-a-aa-------a
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         5664 21 +     10286 acattgaa----cacaggg--t-----------a-a-aa-------a
i Hapalemur_alaotrensis.k141_1280836                    I 1036 C 0
s Hapalemur_gilberti.k141_279011                             4142 21 -     11661 acattgaa----cacaggg--t-----------a-a-aa-------a
i Hapalemur_gilberti.k141_279011                        I 1036 C 0
s Hapalemur_griseus.k141_1387522                             9469 21 +     56096 acattgaa----cacaggg--t-----------a-a-aa-------a
i Hapalemur_griseus.k141_1387522                        I 1036 C 0
s Hapalemur_meridionalis.k141_186231                        32718 21 -     42470 acattgaa----cacaggg--t-----------a-a-aa-------a
i Hapalemur_meridionalis.k141_186231                    I 1036 C 0
s Hapalemur_occidentalis.k141_797938                        49344 21 -     54384 acattgaa----cacaggg--t-----------a-a-aa-------a
i Hapalemur_occidentalis.k141_797938                    I 1035 C 0
s Helogale_parvula.HelPar_flattened_line_22962              22067  8 +     53719 agcccaat---------------------------------------
i Helogale_parvula.HelPar_flattened_line_22962          C 0 I 11
s Hemitragus_hylocrius.HemHyl_scaffold_16669                32468 21 -     91191 acattgag----ccaggat--t-----------a-aaaa--------
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_13814               68360 21 -    108006 GCTTTGAA----CTAGAAG--T-----------A-AAAA--------
i Heterohyrax_brucei.HetBruBak_scaffold_13814           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              150209 18 +    277961 ---ctgag----ccaggat--t-----------a-aaat--------
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      282611 20 -    477199 acattgag----ccagagt--a-----------a-g-aa--------
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959                380 20 +     26078 acattgag----ccagagt--a-----------a-g-aa--------
i Hipposideros_galeritus.HipGal_scaffold_52959          C 0 C 0
s Hoolock_leuconedys.ctg315                                   349862 21 +    431944 ACATTGAG----CCAGGGA--T-----------A-A-AA-------A
i Hoolock_leuconedys.ctg315                                C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 22641  8 -     67322 atcctaaa---------------------------------------
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 I 11
s Hylobates_abbotti.k141_1816750                             1339 21 +      3202 acattgag----ccaggga--t-----------a-a-aa-------a
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1633646                              1309 21 -      2102 acattgag----ccaggga--t-----------a-a-aa-------a
i Hylobates_agilis.k141_1633646                         C 0 C 0
s Hylobates_klossii.k141_468230                              2825 21 +      5464 acattgag----ccaggga--t-----------a-a-aa-------a
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14628174 21 -  25970782 acattgag----ccaggga--t-----------a-a-aa-------a
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                             725 21 +      4161 acattgag----ccaggga--t-----------a-a-aa-------a
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Indri_indri.k141_2197838                                   1143 21 +      3484 acattgag----aaaaggg--t-----------a-a-aa-------a
i Indri_indri.k141_2197838                              I 1026 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              12420 21 +     17520 acattgag----ccaggat--t-----------a-aaaa--------
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               27001 21 +     37189 acactgag----ccaggat--t-----------a-aaaa--------
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          53642 21 -    147782 acgttgag----ccaggga--t-----------a-a-aa-------a
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lemur_catta.scaffold_1                                258411016 21 - 285822530 acattgaa----cacaggg--t-----------a-a-aa-------a
i Lemur_catta.scaffold_1                                I 1036 C 0
s Lepilemur_ankaranensis.k141_884009                        28321 19 +     39228 acattgag----cacagga--t-----------a-a-a---------
i Lepilemur_ankaranensis.k141_884009                    I 1028 C 0
s Lepilemur_dorsalis.k141_134267                            57685 19 +     63517 acattgag----cacagga--t-----------a-a-a---------
i Lepilemur_dorsalis.k141_134267                        I 1028 C 0
s Lepilemur_ruficaudatus.k141_574529                        36065 19 -     38897 acattgag----cacagga--T-----------A-A-A---------
i Lepilemur_ruficaudatus.k141_574529                    I 1027 C 0
s Lepilemur_septentrionalis.k141_710646                      2111 19 -     13103 acattgag----cacagga--T-----------A-A-A---------
i Lepilemur_septentrionalis.k141_710646                 I 1026 C 0
s Leptonychotes_weddellii.KB714749.1                      3090827  8 -   3498232 atgctaag---------------------------------------
i Leptonychotes_weddellii.KB714749.1                    C 0 I 11
s Lipotes_vexillifer.KE558548.1                            139372 21 +   3060487 acattgag----ccaggat--t-----------a-aaaa--------
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19252058 21 +  19376315 acattgag----ccagaga--t-----------a-a-aa-------a
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           14583 21 +     84689 ACATTGAA----CAAGAGG--T-----------A-A-AA-------A
i Loris_lydekkerianus.k141_550999                       I 1019 C 0
s Loris_tardigradus.ctg97                                 3782322 21 +   6799190 ACATTGAA----CAAGAGG--T-----------A-A-AA-------A
i Loris_tardigradus.ctg97                               I 1019 C 0
s Loxodonta_africana.GL010040.1                          20597895 21 -  62548349 gcattgag----ccagggg--t-----------a-aaaa--------
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11094609  8 +  39895028 atgctaaa---------------------------------------
i Lycaon_pictus.CM007556.1                              C 0 I 11
s Macaca_arctoides.k141_2201161                             23809 21 +     74745 actttgag----ccagaga--t-----------a-a-aa-------a
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12710270 21 +  12821369 actttgag----ccagaga--t-----------a-a-aa-------a
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                2844 21 -     26467 actttgag----ccagaga--t-----------a-a-aa-------a
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           50715 21 +     63263 actttgag----ccagaga--t-----------a-a-aa-------a
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 2825 21 -     26361 actttgag----ccagaga--t-----------a-a-aa-------a
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 6015 21 -      7381 actttgag----ccagaga--t-----------a-a-aa-------a
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  49244 21 -     79256 actttgag----ccagaga--t-----------a-a-aa-------a
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196039342 21 + 196197964 ACTTTGAG----CCAGAGA--T-----------A-A-AA-------A
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11449512 21 +  11645122 ACTTTGAG----CCAGAGA--T-----------A-A-AA-------A
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   8198 21 -     46448 actttgag----ccagagg--t-----------a-a-aa-------a
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                5860 21 -     13212 actttgag----ccagaga--t-----------a-a-aa-------a
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 19541 21 -     55006 actttgag----ccagaga--t-----------a-a-aa-------a
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43844656 21 +  43892939 actttgag----ccagaga--t-----------a-a-aa-------a
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               20824 21 -     24607 actttgag----ccagaga--t-----------a-a-aa-------a
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               8195 21 -     27140 actttgag----ccagaga--t-----------a-a-aa-------a
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43441231 21 -  43563597 acattgag----ccagaga--t-----------a-a-aa-------a
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4454035 21 -   4543643 acattgag----ccagaga--t-----------a-a-aa-------a
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            149233 19 +    252755 aaattgaa----acatac---a-----------a-a-aa--------
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             39381 19 +     58827 aaattgaa----acatgc---a-----------a-a-aa--------
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       65029 20 -    234502 acgttgag----ccagggt--a-----------a-a-aa--------
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             5727  8 -     87323 atgctaag---------------------------------------
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 I 11
s Mesoplodon_bidens.MesBid_scaffold_96348                    2006 21 -     12939 acattgag----ccaggat--t-----------a-aaaa--------
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16514079 21 +  47401472 ACATTGAG----CAAAGGG--T-----------A-A-AA-------A
i Microcebus_murinus.CM007691.1                         I 1043 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  40769 21 -     48017 aaagcaag----tcagaag--t-----------a-gaac--------
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         5777 21 +     29742 acattgag----ccagaga--t-----------a-a-aa-------a
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        16323  8 -    104932 atgctaag---------------------------------------
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 I 11
s Mirza_zaza.k141_593947                                     4761 21 -     12809 acattgag----caaaggg--t-----------a-a-aa-------a
i Mirza_zaza.k141_593947                                I 671 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 149801 21 +    154973 acattgag----ccaggat--t-----------a-aaaa--------
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  5814 21 -     19904 acactgag----ccaggat--t-----------a-aaaa--------
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  149747  8 -    168139 agcccaat---------------------------------------
i Mungos_mungo.MunMun_flattened_line_8729               C 0 I 11
s Mustela_putorius.JH417978.1                             4427568  8 -  28371801 atgctaag---------------------------------------
i Mustela_putorius.JH417978.1                           C 0 I 11
s Neomonachus_schauinslandi.NINY01007774.1                4489722  8 -  14209539 atgctaag---------------------------------------
i Neomonachus_schauinslandi.NINY01007774.1              C 0 I 11
s Neophocaena_asiaeorientalis.KZ688543.1                  3954392 21 -   4490290 acattgag----ccaggat--t-----------a-aaaa--------
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Nomascus_annamensis.k141_1817463                            465 21 -      1070 acattgag----ccaggga--t-----------a-a-aa-------a
i Nomascus_annamensis.k141_1817463                      C 0 C 0
s Nomascus_concolor.k141_226614                              4737 21 -      5092 acattgag----ccaggga--t-----------a-a-aa-------a
i Nomascus_concolor.k141_226614                         I 313 I 13
s Nomascus_gabriellae.k141_1400361                            400 21 -      2203 acattgag----ccaggga--t-----------a-a-aa-------a
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_1022                             419 21 -     11638 acattgag----ccaggga--t-----------a-a-aa-------a
i Nomascus_siki_b.tarseq_1022                       C 0 C 0
s Nomascus_siki_a.k141_1035055                                 3051 21 -      3602 acattgag----ccaggga--t-----------a-a-aa-------a
i Nomascus_siki_a.k141_1035055                            I 312 I 48
s Nyctereutes_procyonoides.CAJHUB010000786.1                37468  8 +   3668941 atgctaaa---------------------------------------
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 I 11
s Nycticebus_bengalensis.LG16                            65571146 21 -  95554990 ACATTGAA----CAAGAGG--T-----------A-A-AA-------A
i Nycticebus_bengalensis.LG16                           I 1009 C 0
s Nycticebus_coucang.k141_771591                            14555 21 +     16181 ACATTGAA----CAAGAGG--T-----------A-A-AA-------A
i Nycticebus_coucang.k141_771591                        I 1009 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65679358 21 +  89412551 ACATTGAA----CAAGAGG--T-----------A-A-AA-------A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     I 1010 C 0
s Odobenus_rosmarus.KB229369.1                             684429  8 -   3126709 atgctaag---------------------------------------
i Odobenus_rosmarus.KB229369.1                          C 0 I 11
s Odocoileus_virginianus.KZ101650.1                       1083246 21 +   1425656 acattgag----ccaggat--t-----------a-aaaa--------
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         41335 21 +     78940 acattgag----ccagggt--t-----------a-aaaa--------
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Orcinus_orca.KB316965.1                                 7228068 21 -   7562323 acattgag----ccaggat--t-----------a-aaaa--------
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              63440 32 -     66828 ACACTGAG----CTAAGGG--TTAAAAAAAAAAA-AAAA--------
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      314613  8 -    505867 acgctaaa---------------------------------------
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 I 11
s Otolemur_crassicaudatus.k141_505435                        4503 21 -     53940 acattgaa----caagagg--t-----------a-a-aa-------a
i Otolemur_crassicaudatus.k141_505435                   I 990 C 0
s Otolemur_garnettii.GL873528.1                          18012474 21 -  38779656 ACATTGAA----CAAGAGG--T-----------A-A-AA-------A
i Otolemur_garnettii.GL873528.1                         I 980 C 0
s Ovis_aries.CM001582.2                                 134082258 21 - 275406953 acattgag----ccaggat--t-----------a-aaaa--------
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      83486 21 +    140051 acattgag----ccaggat--t-----------a-aaaa--------
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_troglodytes.KZ622857.1                               332926 21 +    772158 ACATTGAG----CCAGGGA--T-----------A-A-AA-------A
i Pan_troglodytes.KZ622857.1                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  39323  8 +    295523 atcctaag---------------------------------------
i Panthera_onca.PanOnc_flattened_line_1615              C 0 I 11
s Panthera_pardus.KV860323.1                              3643138  8 +  18214204 atcctaag---------------------------------------
i Panthera_pardus.KV860323.1                            C 0 I 11
s Panthera_tigris.KE721879.1                              5032786  8 -   6340057 atcctaag---------------------------------------
i Panthera_tigris.KE721879.1                            C 0 I 11
s Pantholops_hodgsonii.KE114631.1                         1071127 21 -   1292953 acattgag----ccaggat--t-----------a-aaaa--------
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188160020 21 - 188283584 ACATTGAG----CCAGAGA--T-----------A-A-AA-------A
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              3110 21 +     25005 acattgag----ccagaga--t-----------a-a-aa-------a
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47517392 21 +  47705337 acattgag----ccagaga--t-----------a-a-aa-------a
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 71383 21 -    104429 acattgag----ccagaga--t-----------a-a-aa-------a
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    9915 21 +     14967 acattgag----ccagaga--t-----------a-a-aa-------a
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 5780 21 -      7628 acattgag----ccagaga--t-----------a-a-aa-------a
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    120819  8 -    135482 atgctaag---------------------------------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 I 11
s Perodicticus_ibeanus.k141_117958                          10168 21 -     23713 ACATTGAA----CAAGAGG--T-----------A-A-AC-------A
i Perodicticus_ibeanus.k141_117958                      I 1087 C 0
s Perodicticus_potto.k141_1136815                           11308 21 +     61070 acattgaa----caagagg--t-----------a-a-aC-------A
i Perodicticus_potto.k141_1136815                       I 1100 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              2533 21 +      8220 acattgag----ccaggat--t-----------a-aaaa--------
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           9001 21 +     21690 acactgag----ccaggat--t-----------a-aaaa--------
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       25735 21 +     44506 acattgag----ccaggga--t-----------a-a-aa-------a
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        25948 21 +     67491 acattgag----ccaggga--t-----------a-a-aa-------a
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      16187 21 -     98129 acattgag----ccaggga--t-----------a-a-aa-------a
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     25787 21 +    147771 acattgag----ccaggga--t-----------a-a-aa-------a
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         2423 21 -     43940 acattgag----ccaggga--t-----------a-a-aa-------a
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          6506 21 -     55515 acattgag----ccaggga--t-----------a-a-aa-------a
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         25860 21 +    152463 acattgag----ccaggga--t-----------a-a-aa-------a
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       3668 21 -    119457 acattgag----ccaggga--t-----------a-a-aa-------a
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         15583 21 +    134592 acattgag----ccaggga--t-----------a-a-aa-------a
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          26170 21 -     75465 acattgag----ccaggga--t-----------a-a-aa-------a
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              190758 21 -    373494 ACATTGAG----CCAGGGA--T-----------A-A-AA-------A
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19811405 21 +  19899266 acattgag----ccaggga--t-----------a-a-aa-------a
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_11797                50322 21 -     88779 GCTTTGAA----CTAGAAG--T-----------A-AAAA--------
i Procavia_capensis.ProCapCap_scaffold_11797            C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6852390 21 +  12164890 ACATTGAA----CACAGGG--T-----------A-A-AA-------A
i Prolemur_simus.MPIZ01000048.1                         I 1034 C 0
s Propithecus_coquerelli.NW_012147863.1                     21420 21 -     30946 ACATTGAG----CACAGGG--T-----------A-A-AA-------A
i Propithecus_coquerelli.NW_012147863.1                 I 1029 C 0
s Propithecus_coronatus.k141_1353159                         7476 21 +     11805 acattgag----cacaggg--t-----------a-a-aa-------a
i Propithecus_coronatus.k141_1353159                    I 1029 C 0
s Propithecus_diadema.k141_577245                           46824 21 +     52369 acattgag----cacaggg--t-----------a-a-aa-------a
i Propithecus_diadema.k141_577245                       I 1030 C 0
s Propithecus_edwardsi.k141_1317105                         39211 21 -     44753 acattgag----cacaggg--t-----------a-a-aa-------a
i Propithecus_edwardsi.k141_1317105                     I 1030 C 0
s Propithecus_perrieri.k141_7554                            21134 21 +     27322 acattgag----cacaggg--t-----------a-a-aa-------a
i Propithecus_perrieri.k141_7554                        I 1030 C 0
s Propithecus_tattersalli.k141_907138                       20768 21 -     53241 acattgag----cacaggg--t-----------a-a-aa-------a
i Propithecus_tattersalli.k141_907138                   I 1029 C 0
s Propithecus_verreauxi.k141_158021                         43032 21 -     48185 acattgag----cacagag--c-----------a-a-aa-------a
i Propithecus_verreauxi.k141_158021                     I 1029 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        249687  8 -    344369 atgctaag---------------------------------------
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 I 11
s Puma_concolor.QAVW01000427.1                          131539434  8 - 161321710 atcctaag---------------------------------------
i Puma_concolor.QAVW01000427.1                          C 0 I 11
s Rangifer_tarandus.RanTarSib_scaffold_24239                20110 21 +     68503 acattgag----ccaggat--t-----------a-aaaa--------
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1792215 21 +   2252614 acattgag----ccagagt--a-----------a-aaaa--------
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_1069354                      106 21 -       709 gcattgag----ccaggat--t-----------a-aaaa--------
i Saiga_tatarica.SaiTat_scaffold_1069354                C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15676189 21 -  43202129 ACATTGAG----CCAGGGA--T-----------A-A-AA-------A
i Saimiri_boliviensis.NW_024100938.1                    C 0 I 1
s Saimiri_cassiquiarensis.k141_808270                        8102 22 +     34089 acattgag----ccaggga--t-----------aaa-aA-------A
i Saimiri_cassiquiarensis.k141_808270                   C 0 I 1
s Saimiri_macrodon.k141_2087127                              8044 21 -     60842 acattgag----ccaggga--t-----------a-a-aa-------a
i Saimiri_macrodon.k141_2087127                         C 0 I 1
s Saimiri_oerstedii.k141_841116                              8137 21 +     67014 acattgag----ccaggga--t-----------a-a-aa-------a
i Saimiri_oerstedii.k141_841116                         C 0 I 1
s Saimiri_sciureus.k141_1947592                              8115 21 +     60816 acattgag----ccaggga--t-----------a-a-aa-------a
i Saimiri_sciureus.k141_1947592                         C 0 I 1
s Saimiri_ustus.k141_1282476                                 8052 21 -     76454 acattgag----ccaggga--t-----------a-a-aa-------a
i Saimiri_ustus.k141_1282476                            C 0 I 1
s Sapajus_apella.ctg10                                   17344847 21 -  30362882 acattgag----ccaggga--t-----------a-a-aa-------a
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         24168 21 -     62485 acattgag----ccaggga--t-----------a-a-aa-------a
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   39232 24 -    114521 gtgtggtaacacacaccta--a-----------a-g-ac--------
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            23186 20 +    739146 aaatttac----ccaggaa--t-----------a-a-aa--------
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17769648 21 -  27805282 acattgaa----acaggag-tt-----------a-a-ag--------
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             238245  8 -    276980 atgctaag---------------------------------------
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 I 46
s Suricata_suricatta.SurSur_flattened_line_20339            32402  8 +     62062 agcctaat---------------------------------------
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 I 11
s Symphalangus_syndactylus.tarseq_24                        18432 21 -  13920577 acattgag----ccaggga--t-----------a-a-aa-------a
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      810400 21 +   1148477 actgtgag----ccagggt--t-----------a-aaaa--------
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  61042 21 +     99546 actgtgag----ccagagg--t-----------a-aaaa--------
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               31028  6 +     42269 ---------------------T-----------A-A-AA-------A
i Tarsius_lariang.k141_609102                           I 3812 C 0
s Tarsius_wallacei.k141_48636                               64337  6 +     65473 ---------------------T-----------A-A-AA-------A
i Tarsius_wallacei.k141_48636                           I 3805 C 0
s Theropithecus_gelada.CM009951.1                       194011553 21 - 194193292 ACATTGAG----CCAGAGA--T-----------A-A-AA-------A
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   9152 23 +     90398 ACACTGAG----GCAGGGTTTT-----------A-AAAA--------
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16088879 21 +  31416278 gcactgag----ccaggag--t-----------a-aaaa--------
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2797405 28 -   3938065 AAATTGAG----CTAGGGA--T-----------A-C-AAACCACTGA
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    9339 28 +     13056 AAATTGAG----CTAGGGA--T-----------A-C-AAATCACCGA
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69316797 21 -  96451834 acattgag----ccaggat--t-----------a-aaaa--------
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   9769 20 +     10241 ATGTAATA----ACATAGG--A-----------A-G-AG--------
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6519893  8 +  28682327 acgctaag---------------------------------------
i Ursus_maritimus.KK498671.1                            C 0 I 11
s Varecia_rubra.k141_432109                                  9032 21 -     20643 acattgaa----cacaggg--t-----------a-a-aa-------a
i Varecia_rubra.k141_432109                             I 1036 C 0
s Varecia_variegata.k141_775891                             28567 21 -     33872 acattgaa----cacaggg--t-----------a-a-aa-------a
i Varecia_variegata.k141_775891                         I 1036 C 0
s Vicugna_pacos.KN269600.1                                1527833 21 -   2331223 atactgag----ccagggt--c-----------a-aaaa--------
i Vicugna_pacos.KN269600.1                              C 0 I 34
s Vulpes_lagopus.VulLag_flattened_line_2045                143836  8 -    281493 atgctaaa---------------------------------------
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 I 11
s Zalophus_californianus.ZalCal_flattened_line_4097        219281  8 -    227762 atgctaag---------------------------------------
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 I 11
s Ziphius_cavirostris.ZipCav_flattened_line_60625            1541 21 -     13665 acattgag----ccaggat--t-----------a-aaaa--------
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Eptesicus_fuscus.JH977687.1                             4708429 237 +   6522550 I
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Petromus_typicus.PetTyp_scaffold_33007                    16921  0 -     36578 C
e Dinomys_branickii.DinBra_scaffold_1996                   158442 1030 +    228994 I
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           4051 456 -      6963 I
e Oryctolagus_cuniculus.CM000803.1                      141878516 2929 + 163896628 I
e Ochotona_princeps.JH802095.1                            4996729 2205 -  23139505 I
e Lepus_americanus.LepAme_scaffold_62849                    15480 2946 +     22452 I
e Perognathus_longimembris.PerPac_flattened_line_19359       1614 38 +     49596 I
e Dipodomys_stephensi.DipSte_scaffold_84338                  1789 28 -     11986 I
e Dipodomys_ordii.KN672545.1                              3659429 30 +   4240102 I
e Tonatia_saurophila.TonSau_scaffold_3334                  137563 275 -    259118 I
e Tamandua_tetradactyla.TamTet_scaffold_26877               16259 379 +     45698 I
e Tadarida_brasiliensis.TadBra_scaffold_61492                1822 242 +     20549 I
e Sus_scrofa.CM000824.4                                 189273670 1086 + 218635234 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Pteronotus_parnellii.KE867983.1                            5588 252 -     27784 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             6589 379 -      8794 I
e Myotis_myotis.MyoMyo_scaffold_6123                        13515 236 +     66751 I
e Myotis_lucifugus.GL429887.1                             3468272 238 -   3747815 I
e Myotis_davidii.KB114863.1                               5022194 233 +   6462685 I
e Myotis_brandtii.KE161952.1                               970769 237 +   8389877 I
e Murina_feae.MurFea_scaffold_2254                          23900 236 -    100666 I
e Mormoops_blainvillei.MorMeg_scaffold_2952                162937 259 +    265003 I
e Miniopterus_schreibersii.MinSch_scaffold_24116            36998 214 +     45743 I
e Miniopterus_natalensis.LDJU01000022.1                   8212509 213 +  10048721 I
e Micronycteris_hirsuta.MicHir_scaffold_37978               24387 274 -     32043 I
e Lasiurus_borealis.LasBor_scaffold_59542                    5042 241 +     26176 I
e Elephantulus_edwardii.JH947210.1                        7830035 1277 +  15467074 I
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Echinops_telfairi.JH980316.1                           22999931  2 -  44670279 I
e Desmodus_rotundus.KZ672188.1                           18700517 262 -  18957592 I
e Dasypus_novemcinctus.JH568778.1                          185121 383 -   6883506 I
e Choloepus_hoffmanni.KN194586.1                           763329 503 +    964067 I
e Choloepus_didactylus.ChoDid_scaffold_36182                18024 504 -     21363 I
e Carollia_perspicillata.CarPer_scaffold_4436               61226 261 +     67245 I
e Artibeus_jamaicensis.ArtJam_scaffold_41619                10440 261 -     29036 I
e Anoura_caudifer.AnoCau_scaffold_422                      392020 257 -    631301 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           20901  0 -    119109 C
e Glis_glis.GliGli_scaffold_79770                           15993  0 -     18683 C
e Zapus_hudsonius.ZapHud_scaffold_64392                     20218  0 -     20485 C
e Jaculus_jaculus.JH725517.1                              8577088  0 +  11848649 C
e Hylobates_pileatus_a.tarseq_592                             35773 13 -     60944 I
e Allactaga_bullata.AllBul_scaffold_70162                   21404  0 -     22067 C
e Microtus_ochrogaster.CM001673.1                        22823881  0 -  98408828 C
e Xerus_inauris.XerIna_scaffold_7898                       128400 2868 -    134049 I
e Trachypithecus_pileatus.k141_1022309                       5226  0 +     13828 C
e Trachypithecus_phayrei.ctg3                            44662914  0 -  44834318 C
e Trachypithecus_obscurus.k141_1115109                       8130  0 -     28054 C
e Trachypithecus_melamera.k141_699241                        2986  0 -     24393 C
e Trachypithecus_leucocephalus.k141_381681                   3005  0 +     12481 C
e Trachypithecus_laotum.k141_760702                          4719  0 +     14371 C
e Trachypithecus_hatinhensis.k141_504423                     6067  0 -     15592 C
e Trachypithecus_germaini.k141_868450                        3883  0 -     11566 C
e Trachypithecus_geei.k141_670367                           46082  0 -     54611 C
e Trachypithecus_francoisi.k141_768164                       4689  0 -     14244 C
e Trachypithecus_cristatus.k141_1011511                      5261  0 -     12939 C
e Trachypithecus_crepusculus.k141_1588528                   23360  0 -     32910 C
e Trachypithecus_auratus.k141_738098                        29800  0 +     38948 C
e Spermophilus_dauricus.KZ294190.1                        2243603  0 +   2842873 C
e Sigmodon_hispidus.SigHis_scaffold_11332                  104689  0 -    120886 C
e Semnopithecus_vetulus.k141_1143185                        16479  0 +     30600 C
e Semnopithecus_schistaceus.k141_387461                     33457  0 +     42640 C
e Semnopithecus_priam.k141_410937                           40312  0 +     46263 C
e Semnopithecus_johnii.k141_785014                         121532  0 +    130994 C
e Semnopithecus_hypoleucos.k141_761524                      11528  0 +     20762 C
e Semnopithecus_entellus.k141_1572367                        6153  0 +     15331 C
e Rhinopithecus_strykeri.ctg4                            44859307  0 -  45163003 C
e Rhinopithecus_bieti.k119_554384                            2917  0 -     17045 C
e Rattus_norvegicus.chr11                                13917336  0 +  90463843 C
e Pygathrix_nigripes_a.k141_101123                             8537  0 +     18040 C
e Pygathrix_nigripes_b.ctg79                                 6809148  0 +   6970761 C
e Pygathrix_cinerea.k141_374971                             32651  0 +     56732 C
e Psammomys_obesus.NESX01026517.1                           37921  0 +     77221 C
e Presbytis_mitrata.k141_860013                              8661  0 +     14865 C
e Presbytis_comata.k141_672698                               8546  0 -     15069 C
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000036.1               26743271  0 +  26888534 C
e Piliocolobus_kirkii.k141_929665                            4788  0 +      7694 C
e Piliocolobus_gordonorum.k141_1270531                       5421  0 -     17985 C
e Piliocolobus_badius.k141_1987485                           4802  0 -      5908 C
e Peromyscus_maniculatus.KI615518.1                       4955125  0 -   8017169 C
e Onychomys_torridus.OnyTor_scaffold_12578                  42756  0 +     62360 C
e Ondatra_zibethicus.OndZib_scaffold_6821                  130071  0 +    145789 C
e Octodon_degus.JH651621.1                                3687420 1881 +  10294119 I
e Nasalis_larvatus.k141_153429                              11264  0 +     48152 C
e Nannospalax_galili.KL201303.1                            119867  0 +    362372 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     91920 1922 -    117718 I
e Muscardinus_avellanarius.MusAve_scaffold_9643             14525  0 +     98495 C
e Mus_spretus.CM004110.1                                 74336277  0 +  97876770 C
e Mus_pahari.LT608305.1                                  67559927  0 +  89017189 C
e Mus_musculus.chr16                                     75493550  0 +  98207768 C
e Mus_caroli.LT608236.1                                  70771497  0 +  92629107 C
e Mesocricetus_auratus.KB708139.1                         1051192  0 -  26018355 C
e Meriones_unguiculatus.MerUng_scaffold_52233               15570  0 +     15977 C
e Marmota_marmota.CZRN01000005.1                         36877588  0 +  64221397 C
e Ictidomys_tridecemlineatus.JH393315.1                   7129728  0 +  13083262 C
e Hystrix_cristata.HysCri_scaffold_50788                     7688 1865 +     22540 I
e Heterocephalus_glaber.JH602058.1                        2560252  0 +  31725842 C
e Graphiurus_murinus.GraMur_scaffold_4493                   79386  0 +    118900 C
e Fukomys_damarensis.KN123630.1                          13895732  0 -  19261668 C
e Ellobius_talpinus.LOJH01198462.1                           1213  0 -      1901 C
e Ellobius_lutescens.LOEQ01003611.1                        243471  0 -    369425 C
e Dolichotis_patagonum.DolPat_scaffold_14102                39604  0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             61584  0 -    236241 C
e Cuniculus_paca.CunPac_flattened_line_16637                20446  0 +     26546 C
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 32592 1717 -     67205 I
e Ctenodactylus_gundi.CteGun_scaffold_447                  213664  0 -    956709 C
e Cricetulus_griseus.LT883672.1                          53034667  0 +  72327488 C
e Cricetomys_gambianus.CriGam_scaffold_949                 282297  0 -    399297 C
e Colobus_polykomos.k141_1406057                            19335  0 +     23629 C
e Colobus_guereza.LG08                                  147667351  0 + 156195979 C
e Colobus_angolensis.KN985967.1                          10889423  0 +  10971483 C
e Chinchilla_lanigera.JH721867.1                         15963245 964 +  43084221 I
e Cavia_tschudii.CavTsc_scaffold_488                       177725 1742 +    436027 I
e Cavia_porcellus.DS562889.1                             15799553 1742 -  24440124 I
e Cavia_aperea.AVPZ01000278.1                            15787615 1741 -  24422027 I
e Acomys_cahirinus.AcoCah_scaffold_1625                    117433  0 -    189883 C
e Pan_paniscus.CM003386.1                               127578173  0 - 205426864 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               17187 9 +    209709 Tagtcaatc
s Acinonyx_jubatus.LLWD01000356.1                         2038932 2 +   3721120 -ag------
i Acinonyx_jubatus.LLWD01000356.1                       I 11 I 37
s Ailuropoda_melanoleuca.LNAT01000321.1                  10662614 2 +  23371972 -ag------
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 11 I 37
s Ailurus_fulgens.LNAC01000003.1                          7099400 2 -  16596857 -ag------
i Ailurus_fulgens.LNAC01000003.1                        I 11 I 37
s Allenopithecus_nigroviridis.k141_2469532                   5050 9 -     60446 tagtcaatc
i Allenopithecus_nigroviridis.k141_2469532              C 0 I 3
s Allochrocebus_lhoesti.k141_3566948                         5767 9 -     29318 tagtcaaTC
i Allochrocebus_lhoesti.k141_3566948                    C 0 I 3
s Allochrocebus_preussi.k141_1108977                         4705 9 +     38766 tagtcaatc
i Allochrocebus_preussi.k141_1108977                    C 0 I 3
s Allochrocebus_solatus.k141_371672                          5661 9 -     80423 tagtcaatc
i Allochrocebus_solatus.k141_371672                     C 0 I 3
s Alouatta_belzebul.k141_276091                               652 9 +     19852 CTGTCAATC
i Alouatta_belzebul.k141_276091                         C 0 I 4
s Alouatta_caraya.k141_664908                                2908 9 -     12443 CTGTCAATC
i Alouatta_caraya.k141_664908                           C 0 I 4
s Alouatta_discolor.k141_2023149                              207 9 +      5070 CTGTCAATC
i Alouatta_discolor.k141_2023149                        C 0 I 4
s Alouatta_macconnelli.k141_2318944                          2691 9 -     24210 CTGTCAATC
i Alouatta_macconnelli.k141_2318944                     C 0 I 4
s Alouatta_nigerrima.k141_2187093                           29273 9 -     30219 CTGTCAATC
i Alouatta_nigerrima.k141_2187093                       C 0 I 4
s Alouatta_palliata.k141_405616                              5109 9 +     16794 CTGTCAATC
i Alouatta_palliata.k141_405616                         C 0 I 4
s Alouatta_puruensis.k141_1602819                             241 9 -      1470 CTGTCAATC
i Alouatta_puruensis.k141_1602819                       C 0 I 4
s Alouatta_seniculus.k141_790278                             4386 9 -      9835 CTGTCAATC
i Alouatta_seniculus.k141_790278                        C 0 I 4
s Ammotragus_lervia.NIVO01013474.1                        3525139 3 +   4113121 ttg------
i Ammotragus_lervia.NIVO01013474.1                      C 0 I 37
s Antilocapra_americana.AntAmePen_scaffold_27338             2570 3 +     55446 ctg------
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 I 37
s Aotus_azarae.k141_3170768                                 66001 9 +     78111 ctgtcaaTC
i Aotus_azarae.k141_3170768                             C 0 I 4
s Aotus_griseimembra.k141_3275623                            8947 9 +     22701 ctgtcaaTC
i Aotus_griseimembra.k141_3275623                       C 0 I 4
s Aotus_nancymaae.KZ196176.1                              5752905 9 +   9889416 CTGTCAATC
i Aotus_nancymaae.KZ196176.1                            C 0 I 4
s Aotus_trivirgatus.k141_1740727                             9503 9 -    104377 ctgtcaaTC
i Aotus_trivirgatus.k141_1740727                        C 0 I 4
s Aotus_vociferans.k141_718647                               9510 9 +     23246 ctgtcaaTC
i Aotus_vociferans.k141_718647                          C 0 I 4
s Arctocebus_calabarensis.k141_587554                        5816 9 +      9265 TTGCCAATC
i Arctocebus_calabarensis.k141_587554                   C 0 I 4
s Ateles_geoffroyi_b.tarseq_2582                             9542794 9 +  39197703 ctgtcaatc
i Ateles_geoffroyi_b.tarseq_2582                           C 0 I 4
s Ateles_belzebuth.k141_1348307                             64067 9 +     85812 ctgtcaatc
i Ateles_belzebuth.k141_1348307                         C 0 I 4
s Ateles_chamek.k141_1072810                                15080 9 +     89302 ctgtcaatc
i Ateles_chamek.k141_1072810                            C 0 I 4
s Ateles_geoffroyi_a.k141_1300742                             19581 9 -     58268 ctgtcaaTC
i Ateles_geoffroyi_a.k141_1300742                         C 0 I 4
s Ateles_marginatus.k141_899112                             67575 9 +    119057 ctgtcaatc
i Ateles_marginatus.k141_899112                         C 0 I 4
s Ateles_paniscus.k141_1631200                               9544 9 -     25888 ctgtcaaTC
i Ateles_paniscus.k141_1631200                          C 0 I 4
s Avahi_laniger.k141_2840928                                10591 9 -     16375 ttgttaaTC
i Avahi_laniger.k141_2840928                            C 0 I 4
s Avahi_peyrierasi.k141_798820                               4207 9 +      6337 ttgttaaTC
i Avahi_peyrierasi.k141_798820                          C 0 I 4
s Balaenoptera_acutorostrata.KI537095.1                  26383603 3 +  51448160 ctg------
i Balaenoptera_acutorostrata.KI537095.1                 C 0 I 34
s Balaenoptera_bonaerensis.DF502048.1                        8776 3 -     13118 ctg------
i Balaenoptera_bonaerensis.DF502048.1                   C 0 I 34
s Beatragus_hunteri.BeaHun_scaffold_21644                   47601 3 -     72089 ttg------
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 I 37
s Bison_bison.KN264915.1                                   301749 3 -   6870073 ctg------
i Bison_bison.KN264915.1                                C 0 I 34
s Bos_indicus.CM003021.1                                 22955847 3 + 161108492 ctg------
i Bos_indicus.CM003021.1                                C 0 I 34
s Bos_mutus.JH883513.1                                     418112 3 +    998990 ctg------
i Bos_mutus.JH883513.1                                  C 0 I 34
s Bos_taurus.CM000177.6                                  22664501 3 + 158972876 ctg------
i Bos_taurus.CM000177.6                                 C 0 I 34
s Bubalus_bubalis.KI419065.1                               674264 3 +   1914593 ttg------
i Bubalus_bubalis.KI419065.1                            C 0 I 33
s Cacajao_ayresi.k141_724503                               117450 9 -    171031 ctGTCACTC
i Cacajao_ayresi.k141_724503                            C 0 I 4
s Cacajao_calvus.k141_96166                                 16470 9 +    125063 ctGTCACTC
i Cacajao_calvus.k141_96166                             C 0 I 4
s Cacajao_hosomi.k141_303789                                18517 9 -    216513 ctGTCACTC
i Cacajao_hosomi.k141_303789                            C 0 I 4
s Cacajao_melanocephalus.k141_1160263                       11060 9 -    134917 ctGTCACTC
i Cacajao_melanocephalus.k141_1160263                   C 0 I 4
s CanFam4.chr31                                          11525778 2 +  39901454 -ag------
i CanFam4.chr31                                         I 11 I 33
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   20752 2 +     87036 -ag------
i Canis_lupus_VD.CanFam_VD_scaffold_16982               I 11 I 33
s Canis_lupus_dingo.QKWQ01001993.1                       11272461 2 -  35597290 -ag------
i Canis_lupus_dingo.QKWQ01001993.1                      I 11 I 33
s Canis_lupus_familiaris.chr31                           11095172 2 +  39895921 -ag------
i Canis_lupus_familiaris.chr31                          I 11 I 33
s Canis_lupus_orion.HG994411.1                           16461957 2 -  44759192 -ag------
i Canis_lupus_orion.HG994411.1                          I 11 I 33
s Capra_aegagrus.CM003214.1                              21330219 3 + 157394656 ttg------
i Capra_aegagrus.CM003214.1                             C 0 I 37
s Capra_hircus.CM004562.1                               135711436 3 - 157403528 ttg------
i Capra_hircus.CM004562.1                               C 0 I 37
s Carlito_syrichta.NW_007248099.1                          313181 8 +    345090 ttgccAAT-
i Carlito_syrichta.NW_007248099.1                       C 0 I 1
s Catagonus_wagneri.CatWag_scaffold_1305                   162298 3 -    276539 gta------
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 I 34
s Cebus_albifrons.Contig22                               18894282 9 -  29618158 ctgtcaaTC
i Cebus_albifrons.Contig22                              C 0 I 4
s Cebus_olivaceus.k141_93739                                11826 9 -     26817 ctgtcaaTC
i Cebus_olivaceus.k141_93739                            C 0 I 4
s Cebus_unicolor.k141_239009                                16069 9 +     25043 ctgtcaaTC
i Cebus_unicolor.k141_239009                            C 0 I 4
s Cephalopachus_bancanus.k141_702587                        12185 8 +     21754 TTGCCAAT-
i Cephalopachus_bancanus.k141_702587                    C 0 I 1
s Ceratotherium_simum.JH767818.1                          4367185 3 +   7569818 ttg------
i Ceratotherium_simum.JH767818.1                        C 0 I 32
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         6942 3 -      9338 ttg------
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 I 32
s Cercocebus_atys.KQ010443.1                              6558991 9 +   6739814 TAGTCAATC
i Cercocebus_atys.KQ010443.1                            C 0 I 3
s Cercocebus_chrysogaster.k141_2328246                      30468 9 +     60454 tagtcaatc
i Cercocebus_chrysogaster.k141_2328246                  C 0 I 3
s Cercocebus_lunulatus.k141_4634644                          5672 9 -     21101 tagtcaaTC
i Cercocebus_lunulatus.k141_4634644                     C 0 I 3
s Cercocebus_torquatus.k141_3969582                         62982 9 -    107033 tagtcaatc
i Cercocebus_torquatus.k141_3969582                     C 0 I 3
s Cercopithecus_ascanius.k141_4123525                        5844 9 -     17608 tagtcaaTC
i Cercopithecus_ascanius.k141_4123525                   C 0 I 3
s Cercopithecus_cephus.k141_3893260                          3008 9 +     45019 tagtcaaTC
i Cercopithecus_cephus.k141_3893260                     C 0 I 3
s Cercopithecus_diana.k141_2561715                           3074 9 +     15177 tagtcaaTC
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          5892 9 +     16677 tagtcaaTC
i Cercopithecus_hamlyni.k141_129805                     C 0 I 3
s Cercopithecus_lowei.k141_623764                           28080 9 +     35983 tagtcaaTC
i Cercopithecus_lowei.k141_623764                       C 0 I 3
s Cercopithecus_albogularis.ctg51                              11994611 9 +  12117833 tagtcaaTC
i Cercopithecus_albogularis.ctg51                             C 0 I 3
s Cercopithecus_mona.ctg12                               46481372 9 +  46592721 tagtcaatc
i Cercopithecus_mona.ctg12                              C 0 I 3
s Cercopithecus_neglectus.k141_2078027                      44923 9 -     45581 tagtcaaTC
i Cercopithecus_neglectus.k141_2078027                  C 0 I 3
s Cercopithecus_nictitans.k141_1129315                       5904 9 +     35577 tagtcaatc
i Cercopithecus_nictitans.k141_1129315                  C 0 I 3
s Cercopithecus_petaurista.k141_64532                        5698 9 -     25661 tagtcaaTC
i Cercopithecus_petaurista.k141_64532                   C 0 I 3
s Cercopithecus_pogonias.k141_3109732                        5656 9 -     17744 tagtcaaTC
i Cercopithecus_pogonias.k141_3109732                   C 0 I 3
s Cercopithecus_roloway.k141_2263608                        25241 9 +     37128 CAGTCAATC
i Cercopithecus_roloway.k141_2263608                    C 0 I 3
s Cheirogaleus_major.k141_1157592                           62819 9 -     68416 TTGTCAATC
i Cheirogaleus_major.k141_1157592                       C 0 I 4
s Cheirogaleus_medius.k141_133808                           11920 9 +     13308 TTGTAAATC
i Cheirogaleus_medius.k141_133808                       C 0 I 4
s Cheracebus_lucifer.k141_619653                             9107 9 -     18223 CCATCAATC
i Cheracebus_lucifer.k141_619653                        C 0 I 4
s Cheracebus_lugens.k141_996499                               846 9 +    188999 CCATCAATC
i Cheracebus_lugens.k141_996499                         C 0 I 4
s Cheracebus_regulus.k141_2128895                           45145 9 +     57117 CCATCAATC
i Cheracebus_regulus.k141_2128895                       C 0 I 4
s Cheracebus_torquatus.k141_315545                          49824 9 +     54541 CCATCAATC
i Cheracebus_torquatus.k141_315545                      C 0 I 4
s Chiropotes_israelita.k141_1189915                         74629 9 +    196370 ctgtcaaTC
i Chiropotes_israelita.k141_1189915                     C 0 I 4
s Chiropotes_sagulatus.k141_773804                          18810 9 +     40510 ctgtcaaTC
i Chiropotes_sagulatus.k141_773804                      C 0 I 4
s Chlorocebus_aethiops.ctg22                             15143425 9 -  15256731 tagtcaaTC
i Chlorocebus_aethiops.ctg22                            C 0 I 3
s Chlorocebus_pygerythrus.k141_1486215                      37889 9 -     53260 tagtcaatc
i Chlorocebus_pygerythrus.k141_1486215                  C 0 I 3
s Chlorocebus_sabaeus.CM001963.2                        101148448 9 + 101219884 TAGTCAATC
i Chlorocebus_sabaeus.CM001963.2                        C 0 I 3
s Condylura_cristata.JH655880.1                          60621815 3 +  78930452 gta------
i Condylura_cristata.JH655880.1                         C 0 I 29
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         1360 3 -      5782 TTT------
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 I 34
s Crocidura_indochinensis.CroInd_scaffold_27484              1248 3 -     22648 TTG------
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 I 30
s Daubentonia_madagascariensis.ctg11                     16848747 9 +  31942871 ttgtctaac
i Daubentonia_madagascariensis.ctg11                    C 0 I 4
s Delphinapterus_leucas.KZ290064.1                       80040229 3 -  96802777 ttg------
i Delphinapterus_leucas.KZ290064.1                      C 0 I 34
s Dicerorhinus_sumatrensis.PEKH010003161.1                 325834 3 +    993696 ttg------
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 I 32
s Diceros_bicornis.DicBicMic_scaffold_9545                   6474 3 +    151128 ttg------
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 I 32
s Elaphurus_davidianus.JRFZ01086400.1                     1495817 3 +   1727528 ttg------
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 I 37
s Enhydra_lutris.KZ291749.1                              85876855 2 +  99434291 -ag------
i Enhydra_lutris.KZ291749.1                             I 11 I 37
s Equus_asinus.JREZ01000062.1                             5856198 3 -   7175178 ttg------
i Equus_asinus.JREZ01000062.1                           C 0 I 34
s Equus_caballus.CM000402.2                              13354698 3 +  41866177 ttg------
i Equus_caballus.CM000402.2                             C 0 I 34
s Equus_przewalskii.ATBW01073585.1                          16188 3 +     92910 ttg------
i Equus_przewalskii.ATBW01073585.1                      C 0 I 34
s Erinaceus_europaeus.JH835290.1                         11540663 3 +  16010500 aaa------
i Erinaceus_europaeus.JH835290.1                        C 0 I 34
s Erythrocebus_patas.Contig8                             48780459 9 -  48907691 tagtcaaTC
i Erythrocebus_patas.Contig8                            C 0 I 3
s Eschrichtius_robustus.EscRob_flattened_line_685          318446 3 +    330699 ctg------
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 I 34
s Eubalaena_japonica.EubJap_flattened_line_7756             64903 3 +     89355 ctg------
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 I 34
s Eulemur_albifrons.k141_715837                              8901 9 +     13586 ctgtcaaTC
i Eulemur_albifrons.k141_715837                         C 0 I 4
s Eulemur_collaris.k141_1015201                              2164 9 -      4292 ctgtcaaTC
i Eulemur_collaris.k141_1015201                         C 0 I 4
s Eulemur_coronatus.k141_3240342                            15297 9 +     36558 ctgtcaaTC
i Eulemur_coronatus.k141_3240342                        C 0 I 4
s Eulemur_flavifrons.k141_903901                            11622 9 +     60246 ctgtcaaTC
i Eulemur_flavifrons.k141_903901                        C 0 I 4
s Eulemur_fulvus.k141_653297                                15105 9 +    109717 ctgtcaaTC
i Eulemur_fulvus.k141_653297                            C 0 I 4
s Eulemur_macaco.k141_747087                                 3090 9 -     19505 ctgtcaaTC
i Eulemur_macaco.k141_747087                            C 0 I 4
s Eulemur_mongoz.k141_825972                                19762 9 +     27497 CTGTCAATC
i Eulemur_mongoz.k141_825972                            C 0 I 4
s Eulemur_rubriventer.k141_411740                           22218 9 +     26808 CTGTCAATC
i Eulemur_rubriventer.k141_411740                       C 0 I 4
s Eulemur_rufus.k141_1620292                                36953 9 +     46535 ctgtcaaTC
i Eulemur_rufus.k141_1620292                            C 0 I 4
s Eulemur_sanfordi.k141_186399                              19692 9 -     29447 ctgtcaaTC
i Eulemur_sanfordi.k141_186399                          C 0 I 4
s Felis_catus.CM001386.2                                129898351 2 - 159252932 -ag------
i Felis_catus.CM001386.2                                I 11 I 37
s Felis_catus_fca126.CM031420.1                         129285319 2 - 158578461 -ag------
i Felis_catus_fca126.CM031420.1                         I 11 I 37
s Felis_nigripes.FelNig_flattened_line_8080                 26414 2 +     52776 -ag------
i Felis_nigripes.FelNig_flattened_line_8080             I 11 I 37
s Galago_moholi.ctg555                                     214701 9 -    847004 ttgtcaaTC
i Galago_moholi.ctg555                                  C 0 I 4
s Galago_senegalensis.k141_964197                           17059 9 -     43889 ttgtcaaTC
i Galago_senegalensis.k141_964197                       C 0 I 4
s Galagoides_demidoff.k141_1769638                          14165 9 +     27357 ttgtcaaTC
i Galagoides_demidoff.k141_1769638                      C 0 I 4
s Galeopterus_variegatus.GalVar_scaffold_354               159206 3 +    324696 tTG------
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    185621 3 -    189561 ttg------
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 I 32
s Gorilla_beringei.k141_111300                               8898 9 -     14630 tagtcaaTC
i Gorilla_beringei.k141_111300                          C 0 I 4
s Gorilla_gorilla.LT578340.1                            119655998 9 - 195582420 tagtcaaTC
i Gorilla_gorilla.LT578340.1                            C 0 I 4
s Hapalemur_alaotrensis.k141_1280836                         5685 9 +     10286 ctgtcaaTC
i Hapalemur_alaotrensis.k141_1280836                    C 0 I 4
s Hapalemur_gilberti.k141_279011                             4163 9 -     11661 ctgtcaaTC
i Hapalemur_gilberti.k141_279011                        C 0 I 4
s Hapalemur_griseus.k141_1387522                             9490 9 +     56096 ctgtcaaTC
i Hapalemur_griseus.k141_1387522                        C 0 I 4
s Hapalemur_meridionalis.k141_186231                        32739 9 -     42470 ctGTCTATC
i Hapalemur_meridionalis.k141_186231                    C 0 I 4
s Hapalemur_occidentalis.k141_797938                        49365 9 -     54384 ctgtcaaTC
i Hapalemur_occidentalis.k141_797938                    C 0 I 4
s Helogale_parvula.HelPar_flattened_line_22962              22086 2 +     53719 -ag------
i Helogale_parvula.HelPar_flattened_line_22962          I 11 I 37
s Hemitragus_hylocrius.HemHyl_scaffold_16669                32489 3 -     91191 ctg------
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 I 37
s Heterohyrax_brucei.HetBruBak_scaffold_13814               68381 3 -    108006 TCA------
i Heterohyrax_brucei.HetBruBak_scaffold_13814           C 0 I 34
s Hippopotamus_amphibius.HipAmp_scaffold_1308              150227 3 +    277961 ttg------
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 I 34
s Hipposideros_armiger.JXIK01001085.1                      282631 3 -    477199 ttg------
i Hipposideros_armiger.JXIK01001085.1                   C 0 I 34
s Hipposideros_galeritus.HipGal_scaffold_52959                400 3 +     26078 ttg------
i Hipposideros_galeritus.HipGal_scaffold_52959          C 0 I 34
s Hoolock_leuconedys.ctg315                                   349883 9 +    431944 TAGTCAATC
i Hoolock_leuconedys.ctg315                                C 0 I 4
s Hyaena_hyaena.HyaHya_flattened_line_20729                 22660 2 -     67322 -ag------
i Hyaena_hyaena.HyaHya_flattened_line_20729             I 11 I 37
s Hylobates_abbotti.k141_1816750                             1360 9 +      3202 tagtcaaTC
i Hylobates_abbotti.k141_1816750                        C 0 I 4
s Hylobates_agilis.k141_1633646                              1330 9 -      2102 tagtcaaTC
i Hylobates_agilis.k141_1633646                         C 0 I 4
s Hylobates_klossii.k141_468230                              2846 9 +      5464 tagtcaaTC
i Hylobates_klossii.k141_468230                         C 0 I 4
s Hylobates_pileatus_b.ContigUN                                 14628195 9 -  25970782 tagtcaaTC
i Hylobates_pileatus_b.ContigUN                                C 0 I 4
s Hylobates_muelleri.k141_1139146                             746 9 +      4161 tagtcaaTC
i Hylobates_muelleri.k141_1139146                       C 0 I 4
s Indri_indri.k141_2197838                                   1164 9 +      3484 ttgtcaaTC
i Indri_indri.k141_2197838                              C 0 I 4
s Inia_geoffrensis.IniGeo_flattened_line_66725              12441 3 +     17520 ttg------
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 I 34
s Kogia_breviceps.KogBre_flattened_line_35920               27022 3 +     37189 ttg------
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 I 34
s Lagothrix_lagothricha.k141_12968                          53663 9 -    147782 ctgtcaatc
i Lagothrix_lagothricha.k141_12968                      C 0 I 4
s Lemur_catta.scaffold_1                                258411037 9 - 285822530 ctgtcaaTC
i Lemur_catta.scaffold_1                                C 0 I 4
s Lepilemur_ankaranensis.k141_884009                        28340 9 +     39228 ttgtcaatc
i Lepilemur_ankaranensis.k141_884009                    C 0 I 4
s Lepilemur_dorsalis.k141_134267                            57704 9 +     63517 ttgtcaatc
i Lepilemur_dorsalis.k141_134267                        C 0 I 4
s Lepilemur_ruficaudatus.k141_574529                        36084 9 -     38897 TTGTCAATC
i Lepilemur_ruficaudatus.k141_574529                    C 0 I 4
s Lepilemur_septentrionalis.k141_710646                      2130 9 -     13103 TTGTCAATC
i Lepilemur_septentrionalis.k141_710646                 C 0 I 4
s Leptonychotes_weddellii.KB714749.1                      3090846 2 -   3498232 -ag------
i Leptonychotes_weddellii.KB714749.1                    I 11 I 33
s Lipotes_vexillifer.KE558548.1                            139393 3 +   3060487 ttg------
i Lipotes_vexillifer.KE558548.1                         C 0 I 34
s Lophocebus_aterrimus.ctg55                             19252079 9 +  19376315 tagtcaatc
i Lophocebus_aterrimus.ctg55                            C 0 I 3
s Loris_lydekkerianus.k141_550999                           14604 9 +     84689 ATGCCAATC
i Loris_lydekkerianus.k141_550999                       C 0 I 4
s Loris_tardigradus.ctg97                                 3782343 9 +   6799190 ATGCCAATC
i Loris_tardigradus.ctg97                               C 0 I 4
s Loxodonta_africana.GL010040.1                          20597916 3 -  62548349 tta------
i Loxodonta_africana.GL010040.1                         C 0 I 34
s Lycaon_pictus.CM007556.1                               11094628 2 +  39895028 -ag------
i Lycaon_pictus.CM007556.1                              I 11 I 33
s Macaca_arctoides.k141_2201161                             23830 9 +     74745 tagtcaatc
i Macaca_arctoides.k141_2201161                         C 0 I 3
s Macaca_assamensis.Contig65                             12710291 9 +  12821369 tagtcaatc
i Macaca_assamensis.Contig65                            C 0 I 3
s Macaca_cyclopis.k119_883699                                2865 9 -     26467 tagtcaaTC
i Macaca_cyclopis.k119_883699                           C 0 I 3
s Macaca_fascicularis.k141_155037                           50736 9 +     63263 tagtcaatc
i Macaca_fascicularis.k141_155037                       C 0 I 3
s Macaca_fuscata.k119_938422                                 2846 9 -     26361 tagtcaaTC
i Macaca_fuscata.k119_938422                            C 0 I 3
s Macaca_leonina.k141_467472                                 6036 9 -      7381 tagtcaaTC
i Macaca_leonina.k141_467472                            C 0 I 3
s Macaca_maura.k141_251854                                  49265 9 -     79256 tagtcaatc
i Macaca_maura.k141_251854                              C 0 I 3
s Macaca_mulatta.NC_041755.1                            196039363 9 + 196197964 TAGTCAATC
i Macaca_mulatta.NC_041755.1                            C 0 I 3
s Macaca_nemestrina.KQ004885.1                           11449533 9 +  11645122 TAGTCAATC
i Macaca_nemestrina.KQ004885.1                          C 0 I 3
s Macaca_nigra.k141_282495                                   8219 9 -     46448 tagtcaaTC
i Macaca_nigra.k141_282495                              C 0 I 3
s Macaca_radiata.k141_3680256                                5881 9 -     13212 tagtcaaTC
i Macaca_radiata.k141_3680256                           C 0 I 3
s Macaca_siberu.k141_741907                                 19562 9 -     55006 tagtcaatc
i Macaca_siberu.k141_741907                             C 0 I 3
s Macaca_silenus.Contig12                                43844677 9 +  43892939 tagtcaatc
i Macaca_silenus.Contig12                               C 0 I 3
s Macaca_thibetana.k99_662710                               20845 9 -     24607 tagtcaaTC
i Macaca_thibetana.k99_662710                           C 0 I 3
s Macaca_tonkeana.k141_2870633                               8216 9 -     27140 tagtcaaTC
i Macaca_tonkeana.k141_2870633                          C 0 I 3
s Mandrillus_leucophaeus.scaffold125                     43441252 9 -  43563597 tagtcaatc
i Mandrillus_leucophaeus.scaffold125                    C 0 I 3
s Mandrillus_sphinx.Contig144                             4454056 9 -   4543643 tagtcaatc
i Mandrillus_sphinx.Contig144                           C 0 I 3
s Manis_javanica.JSZB01003966.1                            149252 3 +    252755 ttg------
i Manis_javanica.JSZB01003966.1                         C 0 I 34
s Manis_pentadactyla.KN017078.1                             39400 3 +     58827 tta------
i Manis_pentadactyla.KN017078.1                         C 0 I 34
s Megaderma_lyra.MegLyr_scaffold_3562                       65049 3 -    234502 ctg------
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 I 33
s Mellivora_capensis.MelCap_flattened_line_15433             5746 2 -     87323 -ag------
i Mellivora_capensis.MelCap_flattened_line_15433        I 11 I 37
s Mesoplodon_bidens.MesBid_scaffold_96348                    2027 3 -     12939 ttg------
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 I 34
s Microcebus_murinus.CM007691.1                          16514100 9 +  47401472 TGGTCAATC
i Microcebus_murinus.CM007691.1                         C 0 I 4
s Microgale_talazaci.MicTal_scaffold_34660                  40790 3 -     48017 ttg------
i Microgale_talazaci.MicTal_scaffold_34660              C 0 I 34
s Miopithecus_ogouensis.k141_2935907                         5798 9 +     29742 tagtcaaCC
i Miopithecus_ogouensis.k141_2935907                    C 0 I 3
s Mirounga_angustirostris.MirAng_flattened_line_8852        16342 2 -    104932 -ag------
i Mirounga_angustirostris.MirAng_flattened_line_8852    I 11 I 33
s Mirza_zaza.k141_593947                                     4782 9 -     12809 tggtcaaTC
i Mirza_zaza.k141_593947                                C 0 I 4
s Monodon_monoceros.MonMon_M_scaffold_5598                 149822 3 +    154973 ttg------
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 I 34
s Moschus_moschiferus.MosMos_scaffold_78805                  5835 3 -     19904 ttg------
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 I 37
s Mungos_mungo.MunMun_flattened_line_8729                  149766 2 -    168139 -ag------
i Mungos_mungo.MunMun_flattened_line_8729               I 11 I 37
s Mustela_putorius.JH417978.1                             4427587 2 -  28371801 -ag------
i Mustela_putorius.JH417978.1                           I 11 I 37
s Neomonachus_schauinslandi.NINY01007774.1                4489741 2 -  14209539 -ag------
i Neomonachus_schauinslandi.NINY01007774.1              I 11 I 33
s Neophocaena_asiaeorientalis.KZ688543.1                  3954413 3 -   4490290 ttg------
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 I 34
s Nomascus_annamensis.k141_1817463                            486 9 -      1070 tagtcaaTC
i Nomascus_annamensis.k141_1817463                      C 0 I 4
s Nomascus_concolor.k141_70405                                486 9 +      1153 tagtcaaTC
i Nomascus_concolor.k141_70405                          I 21 I 24
s Nomascus_gabriellae.k141_1400361                            421 9 -      2203 tagtcaaTC
i Nomascus_gabriellae.k141_1400361                      C 0 I 4
s Nomascus_siki_b.tarseq_1022                             440 9 -     11638 tagtcaaTC
i Nomascus_siki_b.tarseq_1022                       C 0 I 24
s Nomascus_siki_a.k141_421408                                   331 9 +     16235 TAGTCAATC
i Nomascus_siki_a.k141_421408                             I 21 I 4
s Nyctereutes_procyonoides.CAJHUB010000786.1                37487 2 +   3668941 -ag------
i Nyctereutes_procyonoides.CAJHUB010000786.1            I 11 I 33
s Nycticebus_bengalensis.LG16                            65571167 9 -  95554990 TTGTCAATC
i Nycticebus_bengalensis.LG16                           C 0 I 4
s Nycticebus_coucang.k141_771591                            14576 9 +     16181 TTGTCAATC
i Nycticebus_coucang.k141_771591                        C 0 I 4
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65679379 9 +  89412551 TTGTCCATC
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 I 4
s Odobenus_rosmarus.KB229369.1                             684448 2 -   3126709 -ag------
i Odobenus_rosmarus.KB229369.1                          I 11 I 33
s Odocoileus_virginianus.KZ101650.1                       1083267 3 +   1425656 ttg------
i Odocoileus_virginianus.KZ101650.1                     C 0 I 37
s Okapia_johnstoni.LVCL01S0017931.1                         41356 3 +     78940 ttg------
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 I 32
s Orcinus_orca.KB316965.1                                 7228089 3 -   7562323 ttg------
i Orcinus_orca.KB316965.1                               C 0 I 34
s Orycteropus_afer.OryAfe_flattened_line_13509              63472 3 -     66828 TTG------
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 I 34
s Otocyon_megalotis.JAEUCK010005121.1                      314632 2 -    505867 -ag------
i Otocyon_megalotis.JAEUCK010005121.1                   I 11 I 33
s Otolemur_crassicaudatus.k141_505435                        4524 9 -     53940 ttgtcaaTC
i Otolemur_crassicaudatus.k141_505435                   C 0 I 4
s Otolemur_garnettii.GL873528.1                          18012495 9 -  38779656 TTGTCAATC
i Otolemur_garnettii.GL873528.1                         C 0 I 4
s Ovis_aries.CM001582.2                                 134082279 3 - 275406953 ctg------
i Ovis_aries.CM001582.2                                 C 0 I 37
s Ovis_canadensis.OviCan_scaffold_6251                      83507 3 +    140051 ctg------
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 I 37
s Pan_troglodytes.KZ622857.1                               332947 9 +    772158 TAGTCAATC
i Pan_troglodytes.KZ622857.1                            C 0 I 4
s Panthera_onca.PanOnc_flattened_line_1615                  39342 2 +    295523 -ag------
i Panthera_onca.PanOnc_flattened_line_1615              I 11 I 37
s Panthera_pardus.KV860323.1                              3643157 2 +  18214204 -ag------
i Panthera_pardus.KV860323.1                            I 11 I 37
s Panthera_tigris.KE721879.1                              5032805 2 -   6340057 -ag------
i Panthera_tigris.KE721879.1                            I 11 I 37
s Pantholops_hodgsonii.KE114631.1                         1071148 3 -   1292953 ttg------
i Pantholops_hodgsonii.KE114631.1                       C 0 I 37
s Papio_anubis.CM001492.2                               188160041 9 - 188283584 TAGTCAATC
i Papio_anubis.CM001492.2                               C 0 I 3
s Papio_cynocephalus.k141_45376                              3131 9 +     25005 tagtcaaTC
i Papio_cynocephalus.k141_45376                         C 0 I 3
s Papio_hamadryas.Contig15                               47517413 9 +  47705337 tagtcaatc
i Papio_hamadryas.Contig15                              C 0 I 3
s Papio_kindae.k141_5458022                                 71404 9 -    104429 tagtcaatc
i Papio_kindae.k141_5458022                             C 0 I 3
s Papio_papio.k141_979496                                    9936 9 +     14967 tagtcaaTC
i Papio_papio.k141_979496                               C 0 I 3
s Papio_ursinus.k141_1345919                                 5801 9 -      7628 tagtcaaTC
i Papio_ursinus.k141_1345919                            C 0 I 3
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    120838 2 -    135482 -ag------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 I 11 I 37
s Perodicticus_ibeanus.k141_117958                          10189 9 -     23713 TTACCAATC
i Perodicticus_ibeanus.k141_117958                      C 0 I 4
s Perodicticus_potto.k141_1136815                           11329 9 +     61070 TTGCCAATC
i Perodicticus_potto.k141_1136815                       C 0 I 4
s Phocoena_phocoena.PhoPho_flattened_line_53071              2554 3 +      8220 ttg------
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 I 34
s Platanista_gangetica.PlaMin_flattened_line_72990           9022 3 +     21690 ttg------
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 I 34
s Plecturocebus_bernhardi.k141_959214                       25756 9 +     44506 ccgtcaaTC
i Plecturocebus_bernhardi.k141_959214                   C 0 I 4
s Plecturocebus_brunneus.k141_498086                        25969 9 +     67491 ccgtcaaTC
i Plecturocebus_brunneus.k141_498086                    C 0 I 4
s Plecturocebus_caligatus.k141_2539816                      16208 9 -     98129 ccgtcaaTC
i Plecturocebus_caligatus.k141_2539816                  C 0 I 4
s Plecturocebus_cinerascens.k141_744510                     25808 9 +    147771 ccgtcaaTC
i Plecturocebus_cinerascens.k141_744510                 C 0 I 4
s Plecturocebus_cupreus.k141_1145860                         2444 9 -     43940 ccgtcaaTC
i Plecturocebus_cupreus.k141_1145860                    C 0 I 4
s Plecturocebus_dubius.k141_3565563                          6527 9 -     55515 ccgtcaaTC
i Plecturocebus_dubius.k141_3565563                     C 0 I 4
s Plecturocebus_grovesi.k141_242819                         25881 9 +    152463 ccgtcaaTC
i Plecturocebus_grovesi.k141_242819                     C 0 I 4
s Plecturocebus_hoffmannsi.k141_985533                       3689 9 -    119457 ccgtcaaTC
i Plecturocebus_hoffmannsi.k141_985533                  C 0 I 4
s Plecturocebus_miltoni.k141_841561                         15604 9 +    134592 ccgtcaaTC
i Plecturocebus_miltoni.k141_841561                     C 0 I 4
s Plecturocebus_moloch.k141_890597                          26191 9 -     75465 ccgtcaaTC
i Plecturocebus_moloch.k141_890597                      C 0 I 4
s Pongo_abelii.NDHI03003816.1                              190779 9 -    373494 TAGTCAATC
i Pongo_abelii.NDHI03003816.1                           C 0 I 4
s Pongo_pygmaeus.ctg62                                   19811426 9 +  19899266 tagtcaaTC
i Pongo_pygmaeus.ctg62                                  C 0 I 4
s Procavia_capensis.ProCapCap_scaffold_11797                50343 3 -     88779 TCA------
i Procavia_capensis.ProCapCap_scaffold_11797            C 0 I 34
s Prolemur_simus.MPIZ01000048.1                           6852411 9 +  12164890 CTGTCAATC
i Prolemur_simus.MPIZ01000048.1                         C 0 I 4
s Propithecus_coquerelli.NW_012147863.1                     21441 9 -     30946 TTGTTAATC
i Propithecus_coquerelli.NW_012147863.1                 C 0 I 4
s Propithecus_coronatus.k141_1353159                         7497 9 +     11805 ttgttaaTC
i Propithecus_coronatus.k141_1353159                    C 0 I 4
s Propithecus_diadema.k141_577245                           46845 9 +     52369 ttgttaaTC
i Propithecus_diadema.k141_577245                       C 0 I 4
s Propithecus_edwardsi.k141_1317105                         39232 9 -     44753 ttgttaaTC
i Propithecus_edwardsi.k141_1317105                     C 0 I 4
s Propithecus_perrieri.k141_7554                            21155 9 +     27322 ttgttaaTC
i Propithecus_perrieri.k141_7554                        C 0 I 4
s Propithecus_tattersalli.k141_907138                       20789 9 -     53241 ttgttaaTC
i Propithecus_tattersalli.k141_907138                   C 0 I 4
s Propithecus_verreauxi.k141_158021                         43053 9 -     48185 ttgttaaTC
i Propithecus_verreauxi.k141_158021                     C 0 I 4
s Pteronura_brasiliensis.PteBra_flattened_line_1343        249706 2 -    344369 -ag------
i Pteronura_brasiliensis.PteBra_flattened_line_1343     I 11 I 37
s Puma_concolor.QAVW01000427.1                          131539453 2 - 161321710 -ag------
i Puma_concolor.QAVW01000427.1                          I 11 I 37
s Rangifer_tarandus.RanTarSib_scaffold_24239                20131 3 +     68503 ttg------
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 I 37
s Rhinolophus_sinicus.LVEH01000179.1                      1792236 3 +   2252614 ttg------
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 I 34
s Saiga_tatarica.SaiTat_scaffold_1069354                      127 3 -       709 ttt------
i Saiga_tatarica.SaiTat_scaffold_1069354                C 0 I 37
s Saimiri_boliviensis.NW_024100938.1                     15676211 9 -  43202129 CTGTCAATC
i Saimiri_boliviensis.NW_024100938.1                    I 1 I 4
s Saimiri_cassiquiarensis.k141_808270                        8125 9 +     34089 CTGTCAATC
i Saimiri_cassiquiarensis.k141_808270                   I 1 I 4
s Saimiri_macrodon.k141_2087127                              8066 9 -     60842 ctgtcaaTC
i Saimiri_macrodon.k141_2087127                         I 1 I 4
s Saimiri_oerstedii.k141_841116                              8159 9 +     67014 ctgtcaaTC
i Saimiri_oerstedii.k141_841116                         I 1 I 4
s Saimiri_sciureus.k141_1947592                              8137 9 +     60816 ctgtcaaTC
i Saimiri_sciureus.k141_1947592                         I 1 I 4
s Saimiri_ustus.k141_1282476                                 8074 9 -     76454 ctgtcaaTC
i Saimiri_ustus.k141_1282476                            I 1 I 4
s Sapajus_apella.ctg10                                   17344868 9 -  30362882 ctgtcaaTC
i Sapajus_apella.ctg10                                  C 0 I 4
s Sapajus_macrocephalus.k141_966464                         24189 9 -     62485 ctgtcaaTC
i Sapajus_macrocephalus.k141_966464                     C 0 I 4
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   39256 3 -    114521 gtg------
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 I 29
s Solenodon_paradoxus.SolPar_flattened_line_1012            23206 3 +    739146 tta------
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 I 31
s Sorex_araneus.JH798170.1                               17769669 3 -  27805282 ttt------
i Sorex_araneus.JH798170.1                              C 0 I 28
s Suricata_suricatta.SurSur_flattened_line_20339            32421 2 +     62062 -ag------
i Suricata_suricatta.SurSur_flattened_line_20339        I 11 I 37
s Symphalangus_syndactylus.tarseq_24                        18453 9 -  13920577 tagtcaaTC
i Symphalangus_syndactylus.tarseq_24                    C 0 I 4
s Tapirus_indicus.TapInd_scaffold_176                      810421 3 +   1148477 ttg------
i Tapirus_indicus.TapInd_scaffold_176                   C 0 I 34
s Tapirus_terrestris.TapTer_scaffold_14939                  61063 3 +     99546 ttg------
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 I 34
s Tarsius_lariang.k141_609102                               31034 8 +     42269 TTGCCAGT-
i Tarsius_lariang.k141_609102                           C 0 I 5
s Tarsius_wallacei.k141_48636                               64343 8 +     65473 TTGCCAGT-
i Tarsius_wallacei.k141_48636                           C 0 I 5
s Theropithecus_gelada.CM009951.1                       194011574 9 - 194193292 TAGTCAATC
i Theropithecus_gelada.CM009951.1                       C 0 I 3
s Tragulus_javanicus.TraJav_scaffold_14717                   9175 3 +     90398 CTA------
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 I 33
s Trichechus_manatus.JH594618.1                          16088900 3 +  31416278 ttg------
i Trichechus_manatus.JH594618.1                         C 0 I 34
s Tupaia_chinensis.KB320831.1                             2797433 3 -   3938065 TTA------
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    9367 3 +     13056 TTA------
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69316818 3 -  96451834 ttg------
i Tursiops_truncatus.MRVK01000923.1                     C 0 I 34
s Uropsilus_gracilis.UroGra_scaffold_69449                   9789 3 +     10241 GTG------
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 I 30
s Ursus_maritimus.KK498671.1                              6519912 2 +  28682327 -ag------
i Ursus_maritimus.KK498671.1                            I 11 I 37
s Varecia_rubra.k141_432109                                  9053 9 -     20643 ctgtcaaTC
i Varecia_rubra.k141_432109                             C 0 I 4
s Varecia_variegata.k141_775891                             28588 9 -     33872 ctgtcaaTC
i Varecia_variegata.k141_775891                         C 0 I 4
s Vulpes_lagopus.VulLag_flattened_line_2045                143855 2 -    281493 -ag------
i Vulpes_lagopus.VulLag_flattened_line_2045             I 11 I 33
s Zalophus_californianus.ZalCal_flattened_line_4097        219300 2 -    227762 -ag------
i Zalophus_californianus.ZalCal_flattened_line_4097     I 11 I 33
s Ziphius_cavirostris.ZipCav_flattened_line_60625            1562 3 -     13665 atg------
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 I 34
e Eptesicus_fuscus.JH977687.1                             4708429 237 +   6522550 I
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Petromus_typicus.PetTyp_scaffold_33007                    16921 0 -     36578 C
e Dinomys_branickii.DinBra_scaffold_1996                   158442 1030 +    228994 I
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           4051 456 -      6963 I
e Oryctolagus_cuniculus.CM000803.1                      141878516 2929 + 163896628 I
e Ochotona_princeps.JH802095.1                            4996729 2205 -  23139505 I
e Lepus_americanus.LepAme_scaffold_62849                    15480 2946 +     22452 I
e Perognathus_longimembris.PerPac_flattened_line_19359       1614 38 +     49596 I
e Dipodomys_stephensi.DipSte_scaffold_84338                  1789 28 -     11986 I
e Dipodomys_ordii.KN672545.1                              3659429 30 +   4240102 I
e Vicugna_pacos.KN269600.1                                1527854 34 -   2331223 I
e Tonatia_saurophila.TonSau_scaffold_3334                  137563 275 -    259118 I
e Tamandua_tetradactyla.TamTet_scaffold_26877               16259 379 +     45698 I
e Tadarida_brasiliensis.TadBra_scaffold_61492                1822 242 +     20549 I
e Sus_scrofa.CM000824.4                                 189273670 1086 + 218635234 I
e Spilogale_gracilis.SpiGra_flattened_line_905             238253 46 -    276980 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Pteronotus_parnellii.KE867983.1                            5588 252 -     27784 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             6589 379 -      8794 I
e Myotis_myotis.MyoMyo_scaffold_6123                        13515 236 +     66751 I
e Myotis_lucifugus.GL429887.1                             3468272 238 -   3747815 I
e Myotis_davidii.KB114863.1                               5022194 233 +   6462685 I
e Myotis_brandtii.KE161952.1                               970769 237 +   8389877 I
e Murina_feae.MurFea_scaffold_2254                          23900 236 -    100666 I
e Mormoops_blainvillei.MorMeg_scaffold_2952                162937 259 +    265003 I
e Miniopterus_schreibersii.MinSch_scaffold_24116            36998 214 +     45743 I
e Miniopterus_natalensis.LDJU01000022.1                   8212509 213 +  10048721 I
e Micronycteris_hirsuta.MicHir_scaffold_37978               24387 274 -     32043 I
e Lasiurus_borealis.LasBor_scaffold_59542                    5042 241 +     26176 I
e Elephantulus_edwardii.JH947210.1                        7830035 1277 +  15467074 I
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Echinops_telfairi.JH980316.1                           22999931 2 -  44670279 I
e Desmodus_rotundus.KZ672188.1                           18700517 262 -  18957592 I
e Dasypus_novemcinctus.JH568778.1                          185121 383 -   6883506 I
e Cryptoprocta_ferox.CryFer_flattened_line_19014            56928 46 -     70449 I
e Choloepus_hoffmanni.KN194586.1                           763329 503 +    964067 I
e Choloepus_didactylus.ChoDid_scaffold_36182                18024 504 -     21363 I
e Carollia_perspicillata.CarPer_scaffold_4436               61226 261 +     67245 I
e Camelus_ferus.KB016973.1                                2976182 34 +   6889770 I
e Camelus_dromedarius.KN271192.1                           400446 34 -  15254737 I
e Camelus_bactrianus.KN276303.1                           3222744 34 -   8989139 I
e Artibeus_jamaicensis.ArtJam_scaffold_41619                10440 261 -     29036 I
e Anoura_caudifer.AnoCau_scaffold_422                      392020 257 -    631301 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           20901 0 -    119109 C
e Glis_glis.GliGli_scaffold_79770                           15993 0 -     18683 C
e Zapus_hudsonius.ZapHud_scaffold_64392                     20218 0 -     20485 C
e Jaculus_jaculus.JH725517.1                              8577088 0 +  11848649 C
e Hylobates_pileatus_a.tarseq_592                             35773 13 -     60944 I
e Allactaga_bullata.AllBul_scaffold_70162                   21404 0 -     22067 C
e Microtus_ochrogaster.CM001673.1                        22823881 0 -  98408828 C
e Xerus_inauris.XerIna_scaffold_7898                       128400 2868 -    134049 I
e Trachypithecus_pileatus.k141_1022309                       5226 0 +     13828 C
e Trachypithecus_phayrei.ctg3                            44662914 0 -  44834318 C
e Trachypithecus_obscurus.k141_1115109                       8130 0 -     28054 C
e Trachypithecus_melamera.k141_699241                        2986 0 -     24393 C
e Trachypithecus_leucocephalus.k141_381681                   3005 0 +     12481 C
e Trachypithecus_laotum.k141_760702                          4719 0 +     14371 C
e Trachypithecus_hatinhensis.k141_504423                     6067 0 -     15592 C
e Trachypithecus_germaini.k141_868450                        3883 0 -     11566 C
e Trachypithecus_geei.k141_670367                           46082 0 -     54611 C
e Trachypithecus_francoisi.k141_768164                       4689 0 -     14244 C
e Trachypithecus_cristatus.k141_1011511                      5261 0 -     12939 C
e Trachypithecus_crepusculus.k141_1588528                   23360 0 -     32910 C
e Trachypithecus_auratus.k141_738098                        29800 0 +     38948 C
e Spermophilus_dauricus.KZ294190.1                        2243603 0 +   2842873 C
e Sigmodon_hispidus.SigHis_scaffold_11332                  104689 0 -    120886 C
e Semnopithecus_vetulus.k141_1143185                        16479 0 +     30600 C
e Semnopithecus_schistaceus.k141_387461                     33457 0 +     42640 C
e Semnopithecus_priam.k141_410937                           40312 0 +     46263 C
e Semnopithecus_johnii.k141_785014                         121532 0 +    130994 C
e Semnopithecus_hypoleucos.k141_761524                      11528 0 +     20762 C
e Semnopithecus_entellus.k141_1572367                        6153 0 +     15331 C
e Rhinopithecus_strykeri.ctg4                            44859307 0 -  45163003 C
e Rhinopithecus_bieti.k119_554384                            2917 0 -     17045 C
e Rattus_norvegicus.chr11                                13917336 0 +  90463843 C
e Pygathrix_nigripes_a.k141_101123                             8537 0 +     18040 C
e Pygathrix_nigripes_b.ctg79                                 6809148 0 +   6970761 C
e Pygathrix_cinerea.k141_374971                             32651 0 +     56732 C
e Psammomys_obesus.NESX01026517.1                           37921 0 +     77221 C
e Presbytis_mitrata.k141_860013                              8661 0 +     14865 C
e Presbytis_comata.k141_672698                               8546 0 -     15069 C
e Pithecia_vanzolinii.k141_831006                           15424 0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514 0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521 0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292 0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093 0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038 0 +     78826 C
e Pithecia_albicans.k141_991845                             45662 0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000036.1               26743271 0 +  26888534 C
e Piliocolobus_kirkii.k141_929665                            4788 0 +      7694 C
e Piliocolobus_gordonorum.k141_1270531                       5421 0 -     17985 C
e Piliocolobus_badius.k141_1987485                           4802 0 -      5908 C
e Peromyscus_maniculatus.KI615518.1                       4955125 0 -   8017169 C
e Onychomys_torridus.OnyTor_scaffold_12578                  42756 0 +     62360 C
e Ondatra_zibethicus.OndZib_scaffold_6821                  130071 0 +    145789 C
e Octodon_degus.JH651621.1                                3687420 1881 +  10294119 I
e Nasalis_larvatus.k141_153429                              11264 0 +     48152 C
e Nannospalax_galili.KL201303.1                            119867 0 +    362372 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     91920 1922 -    117718 I
e Muscardinus_avellanarius.MusAve_scaffold_9643             14525 0 +     98495 C
e Mus_spretus.CM004110.1                                 74336277 0 +  97876770 C
e Mus_pahari.LT608305.1                                  67559927 0 +  89017189 C
e Mus_musculus.chr16                                     75493550 0 +  98207768 C
e Mus_caroli.LT608236.1                                  70771497 0 +  92629107 C
e Mesocricetus_auratus.KB708139.1                         1051192 0 -  26018355 C
e Meriones_unguiculatus.MerUng_scaffold_52233               15570 0 +     15977 C
e Marmota_marmota.CZRN01000005.1                         36877588 0 +  64221397 C
e Ictidomys_tridecemlineatus.JH393315.1                   7129728 0 +  13083262 C
e Hystrix_cristata.HysCri_scaffold_50788                     7688 1865 +     22540 I
e Heterocephalus_glaber.JH602058.1                        2560252 0 +  31725842 C
e Graphiurus_murinus.GraMur_scaffold_4493                   79386 0 +    118900 C
e Fukomys_damarensis.KN123630.1                          13895732 0 -  19261668 C
e Ellobius_talpinus.LOJH01198462.1                           1213 0 -      1901 C
e Ellobius_lutescens.LOEQ01003611.1                        243471 0 -    369425 C
e Dolichotis_patagonum.DolPat_scaffold_14102                39604 0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             61584 0 -    236241 C
e Cuniculus_paca.CunPac_flattened_line_16637                20446 0 +     26546 C
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 32592 1717 -     67205 I
e Ctenodactylus_gundi.CteGun_scaffold_447                  213664 0 -    956709 C
e Cricetulus_griseus.LT883672.1                          53034667 0 +  72327488 C
e Cricetomys_gambianus.CriGam_scaffold_949                 282297 0 -    399297 C
e Colobus_polykomos.k141_1406057                            19335 0 +     23629 C
e Colobus_guereza.LG08                                  147667351 0 + 156195979 C
e Colobus_angolensis.KN985967.1                          10889423 0 +  10971483 C
e Chinchilla_lanigera.JH721867.1                         15963245 964 +  43084221 I
e Cavia_tschudii.CavTsc_scaffold_488                       177725 1742 +    436027 I
e Cavia_porcellus.DS562889.1                             15799553 1742 -  24440124 I
e Cavia_aperea.AVPZ01000278.1                            15787615 1741 -  24422027 I
e Acomys_cahirinus.AcoCah_scaffold_1625                    117433 0 -    189883 C
e Pan_paniscus.CM003386.1                               127578173 0 - 205426864 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               17196 12 +    209709 gattGATTAGAA
s Acinonyx_jubatus.LLWD01000356.1                         2038971  7 +   3721120 -gt----ggagt
i Acinonyx_jubatus.LLWD01000356.1                       I 37 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10662653  7 +  23371972 -gt----gaaat
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 37 C 0
s Ailurus_fulgens.LNAC01000003.1                          7099439  7 -  16596857 -at----gaaat
i Ailurus_fulgens.LNAC01000003.1                        I 37 C 0
s Allenopithecus_nigroviridis.k141_2469532                   5062  9 -     60446 ---TGATTAGAA
i Allenopithecus_nigroviridis.k141_2469532              I 3 C 0
s Allochrocebus_lhoesti.k141_3566948                         5779  9 -     29318 ---TGATTAGAA
i Allochrocebus_lhoesti.k141_3566948                    I 3 C 0
s Allochrocebus_preussi.k141_1108977                         4717  9 +     38766 ---TGATTAGAA
i Allochrocebus_preussi.k141_1108977                    I 3 C 0
s Allochrocebus_solatus.k141_371672                          5673  9 -     80423 ---TGATTAGAA
i Allochrocebus_solatus.k141_371672                     I 3 C 0
s Alouatta_belzebul.k141_276091                               665 12 +     19852 GGTTGATTAGAA
i Alouatta_belzebul.k141_276091                         I 4 C 0
s Alouatta_caraya.k141_664908                                2921 12 -     12443 GGTTGATTAGAA
i Alouatta_caraya.k141_664908                           I 4 C 0
s Alouatta_discolor.k141_2023149                              220 12 +      5070 GGTTGATTAGAA
i Alouatta_discolor.k141_2023149                        I 4 C 0
s Alouatta_macconnelli.k141_2318944                          2704 12 -     24210 GGTTGATTAGAA
i Alouatta_macconnelli.k141_2318944                     I 4 C 0
s Alouatta_nigerrima.k141_2187093                           29286 12 -     30219 GGTTGATTAGAA
i Alouatta_nigerrima.k141_2187093                       I 4 C 0
s Alouatta_palliata.k141_405616                              5122 12 +     16794 GGTTGATTAGAA
i Alouatta_palliata.k141_405616                         I 4 C 0
s Alouatta_puruensis.k141_1602819                             254 12 -      1470 GGCTGATTAGAA
i Alouatta_puruensis.k141_1602819                       I 4 C 0
s Alouatta_seniculus.k141_790278                             4399 12 -      9835 GGCTGATTAGAA
i Alouatta_seniculus.k141_790278                        I 4 C 0
s Ammotragus_lervia.NIVO01013474.1                        3525179  4 +   4113121 --------AGGG
i Ammotragus_lervia.NIVO01013474.1                      I 37 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             2610  4 +     55446 --------AGGG
i Antilocapra_americana.AntAmePen_scaffold_27338        I 37 C 0
s Aotus_azarae.k141_3170768                                 66014 12 +     78111 GGTTGATTAGAA
i Aotus_azarae.k141_3170768                             I 4 C 0
s Aotus_griseimembra.k141_3275623                            8960 12 +     22701 GGTTGATTAGAA
i Aotus_griseimembra.k141_3275623                       I 4 C 0
s Aotus_nancymaae.KZ196176.1                              5752918 12 +   9889416 GGTTGATTAGAA
i Aotus_nancymaae.KZ196176.1                            I 4 C 0
s Aotus_trivirgatus.k141_1740727                             9516 12 -    104377 GGTTGATTAGAA
i Aotus_trivirgatus.k141_1740727                        I 4 C 0
s Aotus_vociferans.k141_718647                               9523 12 +     23246 GGTTGATTAGAA
i Aotus_vociferans.k141_718647                          I 4 C 0
s Arctocebus_calabarensis.k141_587554                        5829  8 +      9265 GAT----AAGAA
i Arctocebus_calabarensis.k141_587554                   I 4 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9542807 12 +  39197703 GGTTAATTAGAA
i Ateles_geoffroyi_b.tarseq_2582                           I 4 C 0
s Ateles_belzebuth.k141_1348307                             64080 12 +     85812 GGTTAATTAGAA
i Ateles_belzebuth.k141_1348307                         I 4 C 0
s Ateles_chamek.k141_1072810                                15093 12 +     89302 GGTTAATTAGAA
i Ateles_chamek.k141_1072810                            I 4 C 0
s Ateles_geoffroyi_a.k141_1300742                             19594 12 -     58268 GGTTAATTAGAA
i Ateles_geoffroyi_a.k141_1300742                         I 4 C 0
s Ateles_marginatus.k141_899112                             67588 12 +    119057 GGTTAATTAGAA
i Ateles_marginatus.k141_899112                         I 4 C 0
s Ateles_paniscus.k141_1631200                               9557 12 -     25888 GGTTAATTAGAA
i Ateles_paniscus.k141_1631200                          I 4 C 0
s Avahi_laniger.k141_2840928                                10604  8 -     16375 GAT----TAGAA
i Avahi_laniger.k141_2840928                            I 4 C 0
s Avahi_peyrierasi.k141_798820                               4220  8 +      6337 GAT----TAGAA
i Avahi_peyrierasi.k141_798820                          I 4 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26383640  7 +  51448160 -at----tagga
i Balaenoptera_acutorostrata.KI537095.1                 I 34 C 0
s Balaenoptera_bonaerensis.DF502048.1                        8813  7 -     13118 -AT----TAGGA
i Balaenoptera_bonaerensis.DF502048.1                   I 34 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   47641  4 -     72089 --------TGGG
i Beatragus_hunteri.BeaHun_scaffold_21644               I 37 C 0
s Bison_bison.KN264915.1                                   301786  3 -   6870073 ---------GGG
i Bison_bison.KN264915.1                                I 34 C 0
s Bos_indicus.CM003021.1                                 22955884  3 + 161108492 ---------GGG
i Bos_indicus.CM003021.1                                I 34 C 0
s Bos_mutus.JH883513.1                                     418149  3 +    998990 ---------GGG
i Bos_mutus.JH883513.1                                  I 34 C 0
s Bos_taurus.CM000177.6                                  22664538  3 + 158972876 ---------GGG
i Bos_taurus.CM000177.6                                 I 34 C 0
s Bubalus_bubalis.KI419065.1                               674300  4 +   1914593 --------AGGG
i Bubalus_bubalis.KI419065.1                            I 33 C 0
s Cacajao_ayresi.k141_724503                               117463 12 -    171031 AGTTGATTAGAA
i Cacajao_ayresi.k141_724503                            I 4 C 0
s Cacajao_calvus.k141_96166                                 16483 12 +    125063 AGTTGATTAGAA
i Cacajao_calvus.k141_96166                             I 4 C 0
s Cacajao_hosomi.k141_303789                                18530 12 -    216513 AGTTGATTAGAA
i Cacajao_hosomi.k141_303789                            I 4 C 0
s Cacajao_melanocephalus.k141_1160263                       11073 12 -    134917 AGTTGATTAGAA
i Cacajao_melanocephalus.k141_1160263                   I 4 C 0
s Camelus_bactrianus.KN276303.1                           3222778  7 -   8989139 -AT----TAGGA
i Camelus_bactrianus.KN276303.1                         I 34 C 0
s Camelus_dromedarius.KN271192.1                           400480  7 -  15254737 -AT----TAGGA
i Camelus_dromedarius.KN271192.1                        I 34 C 0
s Camelus_ferus.KB016973.1                                2976216  7 +   6889770 -AT----TAGGA
i Camelus_ferus.KB016973.1                              I 34 C 0
s CanFam4.chr31                                          11525813  7 +  39901454 -gt----gaaat
i CanFam4.chr31                                         I 33 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   20787  7 +     87036 -gt----gaaat
i Canis_lupus_VD.CanFam_VD_scaffold_16982               I 33 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11272496  7 -  35597290 -gt----gaaat
i Canis_lupus_dingo.QKWQ01001993.1                      I 33 C 0
s Canis_lupus_familiaris.chr31                           11095207  7 +  39895921 -gt----gaaat
i Canis_lupus_familiaris.chr31                          I 33 C 0
s Canis_lupus_orion.HG994411.1                           16461992  7 -  44759192 -gt----gaaat
i Canis_lupus_orion.HG994411.1                          I 33 C 0
s Capra_aegagrus.CM003214.1                              21330259  4 + 157394656 --------AGGG
i Capra_aegagrus.CM003214.1                             I 37 C 0
s Capra_hircus.CM004562.1                               135711476  4 - 157403528 --------AGGG
i Capra_hircus.CM004562.1                               I 37 C 0
s Carlito_syrichta.NW_007248099.1                          313190  8 +    345090 GAT----TAGAA
i Carlito_syrichta.NW_007248099.1                       I 1 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   162335  7 -    276539 -AT----TAGGA
i Catagonus_wagneri.CatWag_scaffold_1305                I 34 C 0
s Cebus_albifrons.Contig22                               18894295 12 -  29618158 GGTTGATTAGAA
i Cebus_albifrons.Contig22                              I 4 C 0
s Cebus_olivaceus.k141_93739                                11839 12 -     26817 GGTTGATTAGAA
i Cebus_olivaceus.k141_93739                            I 4 C 0
s Cebus_unicolor.k141_239009                                16082 12 +     25043 GGTTGATTAGAA
i Cebus_unicolor.k141_239009                            I 4 C 0
s Cephalopachus_bancanus.k141_702587                        12194  8 +     21754 GAT----TAGAA
i Cephalopachus_bancanus.k141_702587                    I 1 C 0
s Ceratotherium_simum.JH767818.1                          4367220  7 +   7569818 -AT----TAGGA
i Ceratotherium_simum.JH767818.1                        I 32 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         6977  7 -      9338 -AT----TAGGA
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    I 32 C 0
s Cercocebus_atys.KQ010443.1                              6559003  9 +   6739814 ---TGATTAGAA
i Cercocebus_atys.KQ010443.1                            I 3 C 0
s Cercocebus_chrysogaster.k141_2328246                      30480  9 +     60454 ---TGATTAGAA
i Cercocebus_chrysogaster.k141_2328246                  I 3 C 0
s Cercocebus_lunulatus.k141_4634644                          5684  9 -     21101 ---TGATTAGAA
i Cercocebus_lunulatus.k141_4634644                     I 3 C 0
s Cercocebus_torquatus.k141_3969582                         62994  9 -    107033 ---TGATTAGAA
i Cercocebus_torquatus.k141_3969582                     I 3 C 0
s Cercopithecus_ascanius.k141_4123525                        5856  8 -     17608 ---TGATTAG-A
i Cercopithecus_ascanius.k141_4123525                   I 3 C 0
s Cercopithecus_cephus.k141_3893260                          3020  9 +     45019 ---TGATTAGAA
i Cercopithecus_cephus.k141_3893260                     I 3 C 0
s Cercopithecus_diana.k141_2561715                           3083  8 +     15177 ----GATTAGAA
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          5904  9 +     16677 ---CGATTAGAA
i Cercopithecus_hamlyni.k141_129805                     I 3 C 0
s Cercopithecus_lowei.k141_623764                           28092  9 +     35983 ---TGATTAGAA
i Cercopithecus_lowei.k141_623764                       I 3 C 0
s Cercopithecus_albogularis.ctg51                              11994623  9 +  12117833 ---TGATTAGAA
i Cercopithecus_albogularis.ctg51                             I 3 C 0
s Cercopithecus_mona.ctg12                               46481384  9 +  46592721 ---TGATTAGAA
i Cercopithecus_mona.ctg12                              I 3 C 0
s Cercopithecus_neglectus.k141_2078027                      44935  9 -     45581 ---TGATTAGAA
i Cercopithecus_neglectus.k141_2078027                  I 3 C 0
s Cercopithecus_nictitans.k141_1129315                       5916  9 +     35577 ---TGATTAGAA
i Cercopithecus_nictitans.k141_1129315                  I 3 C 0
s Cercopithecus_petaurista.k141_64532                        5710  9 -     25661 ---TGATTAGAA
i Cercopithecus_petaurista.k141_64532                   I 3 C 0
s Cercopithecus_pogonias.k141_3109732                        5668  9 -     17744 ---TGATTAGAA
i Cercopithecus_pogonias.k141_3109732                   I 3 C 0
s Cercopithecus_roloway.k141_2263608                        25253  9 +     37128 ---TGATTAGAA
i Cercopithecus_roloway.k141_2263608                    I 3 C 0
s Cheirogaleus_major.k141_1157592                           62832  8 -     68416 GAT----TAGAA
i Cheirogaleus_major.k141_1157592                       I 4 C 0
s Cheirogaleus_medius.k141_133808                           11933  8 +     13308 GAT----TAGAA
i Cheirogaleus_medius.k141_133808                       I 4 C 0
s Cheracebus_lucifer.k141_619653                             9120 12 -     18223 GGTTGATTAGAA
i Cheracebus_lucifer.k141_619653                        I 4 C 0
s Cheracebus_lugens.k141_996499                               859 12 +    188999 GGTTGATTAGAA
i Cheracebus_lugens.k141_996499                         I 4 C 0
s Cheracebus_regulus.k141_2128895                           45158 12 +     57117 GGTTGATTAGAA
i Cheracebus_regulus.k141_2128895                       I 4 C 0
s Cheracebus_torquatus.k141_315545                          49837 12 +     54541 GGTTGATTAGAA
i Cheracebus_torquatus.k141_315545                      I 4 C 0
s Chiropotes_israelita.k141_1189915                         74642 12 +    196370 AGTTGATTAGAA
i Chiropotes_israelita.k141_1189915                     I 4 C 0
s Chiropotes_sagulatus.k141_773804                          18823 12 +     40510 AGTTGATTAGAA
i Chiropotes_sagulatus.k141_773804                      I 4 C 0
s Chlorocebus_aethiops.ctg22                             15143437  9 -  15256731 ---TGATTAGAA
i Chlorocebus_aethiops.ctg22                            I 3 C 0
s Chlorocebus_pygerythrus.k141_1486215                      37901  9 -     53260 ---TGATTAGAA
i Chlorocebus_pygerythrus.k141_1486215                  I 3 C 0
s Chlorocebus_sabaeus.CM001963.2                        101148460  9 + 101219884 ---TGATTAGAA
i Chlorocebus_sabaeus.CM001963.2                        I 3 C 0
s Condylura_cristata.JH655880.1                          60621847  7 +  78930452 -tt----ataaa
i Condylura_cristata.JH655880.1                         I 29 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         1397  7 -      5782 -AT----TAGAA
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    I 34 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              1281  7 -     22648 -AT----TAAGA
i Crocidura_indochinensis.CroInd_scaffold_27484         I 30 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            56974  7 -     70449 -gt----ggagt
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 46 C 0
s Daubentonia_madagascariensis.ctg11                     16848760  8 +  31942871 GAT----TAGAA
i Daubentonia_madagascariensis.ctg11                    I 4 C 0
s Delphinapterus_leucas.KZ290064.1                       80040266  7 -  96802777 -AT----TAGGA
i Delphinapterus_leucas.KZ290064.1                      I 34 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 325869  7 +    993696 -AT----TAGGA
i Dicerorhinus_sumatrensis.PEKH010003161.1              I 32 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   6509  7 +    151128 -AT----TAGGA
i Diceros_bicornis.DicBicMic_scaffold_9545              I 32 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1495857  4 +   1727528 --------AGGG
i Elaphurus_davidianus.JRFZ01086400.1                   I 37 C 0
s Enhydra_lutris.KZ291749.1                              85876894  7 +  99434291 -gt----gaaat
i Enhydra_lutris.KZ291749.1                             I 37 C 0
s Equus_asinus.JREZ01000062.1                             5856235  7 -   7175178 -AT----TAGGA
i Equus_asinus.JREZ01000062.1                           I 34 C 0
s Equus_caballus.CM000402.2                              13354735  7 +  41866177 -AT----TAGGA
i Equus_caballus.CM000402.2                             I 34 C 0
s Equus_przewalskii.ATBW01073585.1                          16225  7 +     92910 -AT----TAGGA
i Equus_przewalskii.ATBW01073585.1                      I 34 C 0
s Erinaceus_europaeus.JH835290.1                         11540700  7 +  16010500 -GT----TAGGA
i Erinaceus_europaeus.JH835290.1                        I 34 C 0
s Erythrocebus_patas.Contig8                             48780471  9 -  48907691 ---TGATTAGAA
i Erythrocebus_patas.Contig8                            I 3 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          318483  7 +    330699 -AT----TAGGA
i Eschrichtius_robustus.EscRob_flattened_line_685       I 34 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             64940  7 +     89355 -AT----TAGGA
i Eubalaena_japonica.EubJap_flattened_line_7756         I 34 C 0
s Eulemur_albifrons.k141_715837                              8914  8 +     13586 GAT----TAGAA
i Eulemur_albifrons.k141_715837                         I 4 C 0
s Eulemur_collaris.k141_1015201                              2177  8 -      4292 GAT----TAGAA
i Eulemur_collaris.k141_1015201                         I 4 C 0
s Eulemur_coronatus.k141_3240342                            15310  8 +     36558 GAT----TAGAA
i Eulemur_coronatus.k141_3240342                        I 4 C 0
s Eulemur_flavifrons.k141_903901                            11635  8 +     60246 GAT----TAGAA
i Eulemur_flavifrons.k141_903901                        I 4 C 0
s Eulemur_fulvus.k141_653297                                15118  8 +    109717 GAT----TAGAA
i Eulemur_fulvus.k141_653297                            I 4 C 0
s Eulemur_macaco.k141_747087                                 3103  8 -     19505 GAT----TAGAA
i Eulemur_macaco.k141_747087                            I 4 C 0
s Eulemur_mongoz.k141_825972                                19775  8 +     27497 AAT----TAGAA
i Eulemur_mongoz.k141_825972                            I 4 C 0
s Eulemur_rubriventer.k141_411740                           22231  8 +     26808 GAT----TAGAA
i Eulemur_rubriventer.k141_411740                       I 4 C 0
s Eulemur_rufus.k141_1620292                                36966  8 +     46535 GAT----TAGAA
i Eulemur_rufus.k141_1620292                            I 4 C 0
s Eulemur_sanfordi.k141_186399                              19705  8 -     29447 AAT----TAGAA
i Eulemur_sanfordi.k141_186399                          I 4 C 0
s Felis_catus.CM001386.2                                129898390  7 - 159252932 -gt----ggagt
i Felis_catus.CM001386.2                                I 37 C 0
s Felis_catus_fca126.CM031420.1                         129285358  7 - 158578461 -gt----ggagt
i Felis_catus_fca126.CM031420.1                         I 37 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 26453  7 +     52776 -gt----ggagt
i Felis_nigripes.FelNig_flattened_line_8080             I 37 C 0
s Galago_moholi.ctg555                                     214714  8 -    847004 GGT----TAGAA
i Galago_moholi.ctg555                                  I 4 C 0
s Galago_senegalensis.k141_964197                           17072  8 -     43889 GGT----TAGAA
i Galago_senegalensis.k141_964197                       I 4 C 0
s Galagoides_demidoff.k141_1769638                          14178  8 +     27357 GGT----TAGAA
i Galagoides_demidoff.k141_1769638                      I 4 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               159209  7 +    324696 -AT----TATAA
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    185656  3 -    189561 ---------GGG
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 32 C 0
s Gorilla_beringei.k141_111300                               8911 12 -     14630 GATTGATTAGAA
i Gorilla_beringei.k141_111300                          I 4 C 0
s Gorilla_gorilla.LT578340.1                            119656011 12 - 195582420 GATTGATTAGAA
i Gorilla_gorilla.LT578340.1                            I 4 C 0
s Hapalemur_alaotrensis.k141_1280836                         5698  8 +     10286 GAT----TAGAA
i Hapalemur_alaotrensis.k141_1280836                    I 4 C 0
s Hapalemur_gilberti.k141_279011                             4176  8 -     11661 GAT----TAGAA
i Hapalemur_gilberti.k141_279011                        I 4 C 0
s Hapalemur_griseus.k141_1387522                             9503  8 +     56096 GAT----TAGAA
i Hapalemur_griseus.k141_1387522                        I 4 C 0
s Hapalemur_meridionalis.k141_186231                        32752  8 -     42470 GAT----TAGAA
i Hapalemur_meridionalis.k141_186231                    I 4 C 0
s Hapalemur_occidentalis.k141_797938                        49378  8 -     54384 GAT----TAGAA
i Hapalemur_occidentalis.k141_797938                    I 4 C 0
s Helogale_parvula.HelPar_flattened_line_22962              22125  7 +     53719 -gt----ggagt
i Helogale_parvula.HelPar_flattened_line_22962          I 37 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                32529  4 -     91191 --------AGGG
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 37 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_13814               68418  7 -    108006 -AC----TAGGA
i Heterohyrax_brucei.HetBruBak_scaffold_13814           I 34 n 34
s Hippopotamus_amphibius.HipAmp_scaffold_1308              150264  7 +    277961 -AT----TAGGA
i Hippopotamus_amphibius.HipAmp_scaffold_1308           I 34 C 0
s Hipposideros_armiger.JXIK01001085.1                      282668  7 -    477199 -AT----TAGGA
i Hipposideros_armiger.JXIK01001085.1                   I 34 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959                437  7 +     26078 -AT----TAGGA
i Hipposideros_galeritus.HipGal_scaffold_52959          I 34 C 0
s Hoolock_leuconedys.ctg315                                   349896 12 +    431944 GATTGATTAGAA
i Hoolock_leuconedys.ctg315                                I 4 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 22699  7 -     67322 -gt----ggagt
i Hyaena_hyaena.HyaHya_flattened_line_20729             I 37 C 0
s Hylobates_abbotti.k141_1816750                             1373 12 +      3202 GATTGATTAGAA
i Hylobates_abbotti.k141_1816750                        I 4 C 0
s Hylobates_agilis.k141_1633646                              1343 12 -      2102 GATTGATTAGAA
i Hylobates_agilis.k141_1633646                         I 4 C 0
s Hylobates_klossii.k141_468230                              2859 12 +      5464 GATTGATTAGAA
i Hylobates_klossii.k141_468230                         I 4 C 0
s Hylobates_pileatus_b.ContigUN                                 14628208 12 -  25970782 GATTGATTAGAA
i Hylobates_pileatus_b.ContigUN                                I 4 C 0
s Hylobates_muelleri.k141_1139146                             759 12 +      4161 GATTGATTAGAA
i Hylobates_muelleri.k141_1139146                       I 4 C 0
s Indri_indri.k141_2197838                                   1177  8 +      3484 GAT----TAGAA
i Indri_indri.k141_2197838                              I 4 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              12478  7 +     17520 -AT----TAGGA
i Inia_geoffrensis.IniGeo_flattened_line_66725          I 34 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               27059  7 +     37189 -AT----TAGGA
i Kogia_breviceps.KogBre_flattened_line_35920           I 34 C 0
s Lagothrix_lagothricha.k141_12968                          53676 12 -    147782 GGTTAATTAGAA
i Lagothrix_lagothricha.k141_12968                      I 4 C 0
s Lemur_catta.scaffold_1                                258411050  8 - 285822530 GAT----TAGAA
i Lemur_catta.scaffold_1                                I 4 C 0
s Lepilemur_ankaranensis.k141_884009                        28353  8 +     39228 TAT----TAAAG
i Lepilemur_ankaranensis.k141_884009                    I 4 C 0
s Lepilemur_dorsalis.k141_134267                            57717  8 +     63517 TAT----TAAAG
i Lepilemur_dorsalis.k141_134267                        I 4 C 0
s Lepilemur_ruficaudatus.k141_574529                        36097  8 -     38897 TAT----TAAAG
i Lepilemur_ruficaudatus.k141_574529                    I 4 C 0
s Lepilemur_septentrionalis.k141_710646                      2143  8 -     13103 TAT----TAAAG
i Lepilemur_septentrionalis.k141_710646                 I 4 C 0
s Leptonychotes_weddellii.KB714749.1                      3090881  7 -   3498232 -gt----gaaat
i Leptonychotes_weddellii.KB714749.1                    I 33 C 0
s Lipotes_vexillifer.KE558548.1                            139430  7 +   3060487 -at----tagga
i Lipotes_vexillifer.KE558548.1                         I 34 C 0
s Lophocebus_aterrimus.ctg55                             19252091  9 +  19376315 ---TGATTAGAA
i Lophocebus_aterrimus.ctg55                            I 3 C 0
s Loris_lydekkerianus.k141_550999                           14617  8 +     84689 GAT----TCAAA
i Loris_lydekkerianus.k141_550999                       I 4 C 0
s Loris_tardigradus.ctg97                                 3782356  8 +   6799190 GAT----TCAAA
i Loris_tardigradus.ctg97                               I 4 C 0
s Loxodonta_africana.GL010040.1                          20597953  7 -  62548349 -AT----TAGGG
i Loxodonta_africana.GL010040.1                         I 34 I 464
s Lycaon_pictus.CM007556.1                               11094663  7 +  39895028 -gt----gaaat
i Lycaon_pictus.CM007556.1                              I 33 C 0
s Macaca_arctoides.k141_2201161                             23842  9 +     74745 ---TGATTAGAA
i Macaca_arctoides.k141_2201161                         I 3 C 0
s Macaca_assamensis.Contig65                             12710303  9 +  12821369 ---TGATTAGAA
i Macaca_assamensis.Contig65                            I 3 C 0
s Macaca_cyclopis.k119_883699                                2877  9 -     26467 ---TGATTAGAA
i Macaca_cyclopis.k119_883699                           I 3 C 0
s Macaca_fascicularis.k141_155037                           50748  9 +     63263 ---TGATTAGAA
i Macaca_fascicularis.k141_155037                       I 3 C 0
s Macaca_fuscata.k119_938422                                 2858  9 -     26361 ---TGATTAGAA
i Macaca_fuscata.k119_938422                            I 3 C 0
s Macaca_leonina.k141_467472                                 6048  9 -      7381 ---TGATTAGAA
i Macaca_leonina.k141_467472                            I 3 C 0
s Macaca_maura.k141_251854                                  49277  9 -     79256 ---TGATTAGAA
i Macaca_maura.k141_251854                              I 3 C 0
s Macaca_mulatta.NC_041755.1                            196039375  9 + 196197964 ---TGATTAGAA
i Macaca_mulatta.NC_041755.1                            I 3 C 0
s Macaca_nemestrina.KQ004885.1                           11449545  9 +  11645122 ---TGATTAGAA
i Macaca_nemestrina.KQ004885.1                          I 3 C 0
s Macaca_nigra.k141_282495                                   8231  9 -     46448 ---TGATTAGAA
i Macaca_nigra.k141_282495                              I 3 C 0
s Macaca_radiata.k141_3680256                                5893  9 -     13212 ---TGATTAGAA
i Macaca_radiata.k141_3680256                           I 3 C 0
s Macaca_siberu.k141_741907                                 19574  9 -     55006 ---TGATTAGAA
i Macaca_siberu.k141_741907                             I 3 C 0
s Macaca_silenus.Contig12                                43844689  9 +  43892939 ---TGATTAGAA
i Macaca_silenus.Contig12                               I 3 C 0
s Macaca_thibetana.k99_662710                               20857  9 -     24607 ---TGATTAGAA
i Macaca_thibetana.k99_662710                           I 3 C 0
s Macaca_tonkeana.k141_2870633                               8228  9 -     27140 ---TGATTAGAA
i Macaca_tonkeana.k141_2870633                          I 3 C 0
s Mandrillus_leucophaeus.scaffold125                     43441264  9 -  43563597 ---TGATTAGAA
i Mandrillus_leucophaeus.scaffold125                    I 3 C 0
s Mandrillus_sphinx.Contig144                             4454068  9 -   4543643 ---TGATTAGAA
i Mandrillus_sphinx.Contig144                           I 3 C 0
s Manis_javanica.JSZB01003966.1                            149289  7 +    252755 -GT----TAGGA
i Manis_javanica.JSZB01003966.1                         I 34 C 0
s Manis_pentadactyla.KN017078.1                             39437  7 +     58827 -GT----TAGGA
i Manis_pentadactyla.KN017078.1                         I 34 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       65085  6 -    234502 -GT----TGGG-
i Megaderma_lyra.MegLyr_scaffold_3562                   I 33 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             5785  7 -     87323 -gt----aaaat
i Mellivora_capensis.MelCap_flattened_line_15433        I 37 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    2064  7 -     12939 -AT----TAGGA
i Mesoplodon_bidens.MesBid_scaffold_96348               I 34 C 0
s Microcebus_murinus.CM007691.1                          16514113  8 +  47401472 GAT----TAGAA
i Microcebus_murinus.CM007691.1                         I 4 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  40827  7 -     48017 -TT----TAGGA
i Microgale_talazaci.MicTal_scaffold_34660              I 34 I 311
s Miopithecus_ogouensis.k141_2935907                         5810  9 +     29742 ---TGATTAGAA
i Miopithecus_ogouensis.k141_2935907                    I 3 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        16377  7 -    104932 -gt----gaaat
i Mirounga_angustirostris.MirAng_flattened_line_8852    I 33 C 0
s Mirza_zaza.k141_593947                                     4795  8 -     12809 GAT----TAGAA
i Mirza_zaza.k141_593947                                I 4 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 149859  7 +    154973 -AT----TAGGA
i Monodon_monoceros.MonMon_M_scaffold_5598              I 34 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  5875  4 -     19904 --------AGGG
i Moschus_moschiferus.MosMos_scaffold_78805             I 37 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  149805  7 -    168139 -gt----ggagt
i Mungos_mungo.MunMun_flattened_line_8729               I 37 C 0
s Mustela_putorius.JH417978.1                             4427626  7 -  28371801 -gt----gaaat
i Mustela_putorius.JH417978.1                           I 37 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4489776  7 -  14209539 -gt----gaaat
i Neomonachus_schauinslandi.NINY01007774.1              I 33 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3954450  7 -   4490290 -AT----TAGGA
i Neophocaena_asiaeorientalis.KZ688543.1                I 34 C 0
s Nomascus_annamensis.k141_1817463                            499 12 -      1070 GATTGATTAGAA
i Nomascus_annamensis.k141_1817463                      I 4 C 0
s Nomascus_concolor.k141_226614                              4771 12 -      5092 GATTGATTAGAA
i Nomascus_concolor.k141_226614                         I 13 C 0
s Nomascus_gabriellae.k141_1400361                            434 12 -      2203 GATTGGTTAGAA
i Nomascus_gabriellae.k141_1400361                      I 4 C 0
s Nomascus_siki_b.tarseq_2374                            2118 12 +      8673 GATTGATTAGAA
i Nomascus_siki_b.tarseq_2374                       I 35 C 0
s Nomascus_siki_a.k141_421408                                   344 12 +     16235 GATTGATTAGAA
i Nomascus_siki_a.k141_421408                             I 4 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                37522  7 +   3668941 -gt----gaaat
i Nyctereutes_procyonoides.CAJHUB010000786.1            I 33 C 0
s Nycticebus_bengalensis.LG16                            65571180  8 -  95554990 GAT----TAGAA
i Nycticebus_bengalensis.LG16                           I 4 C 0
s Nycticebus_coucang.k141_771591                            14589  8 +     16181 GAT----TAGAA
i Nycticebus_coucang.k141_771591                        I 4 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65679392  8 +  89412551 GAT----TAGAA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     I 4 C 0
s Odobenus_rosmarus.KB229369.1                             684483  7 -   3126709 -gt----gaaat
i Odobenus_rosmarus.KB229369.1                          I 33 C 0
s Odocoileus_virginianus.KZ101650.1                       1083307  4 +   1425656 --------AGGG
i Odocoileus_virginianus.KZ101650.1                     I 37 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         41391  3 +     78940 ---------GGG
i Okapia_johnstoni.LVCL01S0017931.1                     I 32 C 0
s Orcinus_orca.KB316965.1                                 7228126  7 -   7562323 -AT----TAGGA
i Orcinus_orca.KB316965.1                               I 34 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              63509  7 -     66828 -AT----TAGGA
i Orycteropus_afer.OryAfe_flattened_line_13509          I 34 I 399
s Otocyon_megalotis.JAEUCK010005121.1                      314667  7 -    505867 -gt----gaaat
i Otocyon_megalotis.JAEUCK010005121.1                   I 33 C 0
s Otolemur_crassicaudatus.k141_505435                        4537  8 -     53940 GGT----TAGAA
i Otolemur_crassicaudatus.k141_505435                   I 4 C 0
s Otolemur_garnettii.GL873528.1                          18012508  8 -  38779656 GGT----TAGAA
i Otolemur_garnettii.GL873528.1                         I 4 C 0
s Ovis_aries.CM001582.2                                 134082319  4 - 275406953 --------AGGG
i Ovis_aries.CM001582.2                                 I 37 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      83547  4 +    140051 --------AGGG
i Ovis_canadensis.OviCan_scaffold_6251                  I 37 C 0
s Pan_paniscus.CM003386.1                               127578173  8 - 205426864 ----GATTAGAA
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.KZ622857.1                               332960 12 +    772158 GATTGATTAGAA
i Pan_troglodytes.KZ622857.1                            I 4 I 16
s Panthera_onca.PanOnc_flattened_line_1615                  39381  7 +    295523 -gt----ggagt
i Panthera_onca.PanOnc_flattened_line_1615              I 37 C 0
s Panthera_pardus.KV860323.1                              3643196  7 +  18214204 -gt----ggagt
i Panthera_pardus.KV860323.1                            I 37 C 0
s Panthera_tigris.KE721879.1                              5032844  7 -   6340057 -gt----ggagt
i Panthera_tigris.KE721879.1                            I 37 C 0
s Pantholops_hodgsonii.KE114631.1                         1071188  4 -   1292953 --------AGGG
i Pantholops_hodgsonii.KE114631.1                       I 37 C 0
s Papio_anubis.CM001492.2                               188160053  9 - 188283584 ---TGATTAGAA
i Papio_anubis.CM001492.2                               I 3 C 0
s Papio_cynocephalus.k141_45376                              3143  9 +     25005 ---TGATTAGAA
i Papio_cynocephalus.k141_45376                         I 3 C 0
s Papio_hamadryas.Contig15                               47517425  9 +  47705337 ---TGATTAGAA
i Papio_hamadryas.Contig15                              I 3 C 0
s Papio_kindae.k141_5458022                                 71416  9 -    104429 ---TGATTAGAA
i Papio_kindae.k141_5458022                             I 3 C 0
s Papio_papio.k141_979496                                    9948  9 +     14967 ---TGATTAGAA
i Papio_papio.k141_979496                               I 3 C 0
s Papio_ursinus.k141_1345919                                 5813  9 -      7628 ---TGATTAGAA
i Papio_ursinus.k141_1345919                            I 3 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    120877  7 -    135482 -gt----ggagt
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 I 37 C 0
s Perodicticus_ibeanus.k141_117958                          10202  8 -     23713 GCT----AAGAA
i Perodicticus_ibeanus.k141_117958                      I 4 C 0
s Perodicticus_potto.k141_1136815                           11342  8 +     61070 GCT----AAGAA
i Perodicticus_potto.k141_1136815                       I 4 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              2591  7 +      8220 -AT----TAGGA
i Phocoena_phocoena.PhoPho_flattened_line_53071         I 34 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           9059  7 +     21690 -AT----TAGGA
i Platanista_gangetica.PlaMin_flattened_line_72990      I 34 C 0
s Plecturocebus_bernhardi.k141_959214                       25769 12 +     44506 GGTTGATGAGAA
i Plecturocebus_bernhardi.k141_959214                   I 4 C 0
s Plecturocebus_brunneus.k141_498086                        25982 12 +     67491 GGTTGATGAGAA
i Plecturocebus_brunneus.k141_498086                    I 4 C 0
s Plecturocebus_caligatus.k141_2539816                      16221 12 -     98129 GGTTGATGAGAA
i Plecturocebus_caligatus.k141_2539816                  I 4 C 0
s Plecturocebus_cinerascens.k141_744510                     25821 12 +    147771 GGTTGATGAGAA
i Plecturocebus_cinerascens.k141_744510                 I 4 C 0
s Plecturocebus_cupreus.k141_1145860                         2457 12 -     43940 GGTTGATGAGAA
i Plecturocebus_cupreus.k141_1145860                    I 4 C 0
s Plecturocebus_dubius.k141_3565563                          6540 12 -     55515 GGTTGATGAGAA
i Plecturocebus_dubius.k141_3565563                     I 4 C 0
s Plecturocebus_grovesi.k141_242819                         25894 12 +    152463 GGTTGATGAGAA
i Plecturocebus_grovesi.k141_242819                     I 4 C 0
s Plecturocebus_hoffmannsi.k141_985533                       3702 12 -    119457 GGTTGATGAGAA
i Plecturocebus_hoffmannsi.k141_985533                  I 4 C 0
s Plecturocebus_miltoni.k141_841561                         15617 12 +    134592 GGTTGATGAGAA
i Plecturocebus_miltoni.k141_841561                     I 4 C 0
s Plecturocebus_moloch.k141_890597                          26204 12 -     75465 GGTTGATGAGAA
i Plecturocebus_moloch.k141_890597                      I 4 C 0
s Pongo_abelii.NDHI03003816.1                              190792 12 -    373494 GATTGATTAGAA
i Pongo_abelii.NDHI03003816.1                           I 4 C 0
s Pongo_pygmaeus.ctg62                                   19811439 12 +  19899266 GATTGATTAGAA
i Pongo_pygmaeus.ctg62                                  I 4 C 0
s Procavia_capensis.ProCapCap_scaffold_11797                50380  7 -     88779 -AC----TAGGA
i Procavia_capensis.ProCapCap_scaffold_11797            I 34 n 34
s Prolemur_simus.MPIZ01000048.1                           6852424  8 +  12164890 GAT----TAGAA
i Prolemur_simus.MPIZ01000048.1                         I 4 C 0
s Propithecus_coquerelli.NW_012147863.1                     21454  8 -     30946 GAT----TAGAA
i Propithecus_coquerelli.NW_012147863.1                 I 4 C 0
s Propithecus_coronatus.k141_1353159                         7510  8 +     11805 GAT----TAGAA
i Propithecus_coronatus.k141_1353159                    I 4 C 0
s Propithecus_diadema.k141_577245                           46858  8 +     52369 GAT----TAGAA
i Propithecus_diadema.k141_577245                       I 4 C 0
s Propithecus_edwardsi.k141_1317105                         39245  8 -     44753 GAT----TAGAA
i Propithecus_edwardsi.k141_1317105                     I 4 C 0
s Propithecus_perrieri.k141_7554                            21168  8 +     27322 GAT----TAGAA
i Propithecus_perrieri.k141_7554                        I 4 C 0
s Propithecus_tattersalli.k141_907138                       20802  8 -     53241 GAT----TAGAA
i Propithecus_tattersalli.k141_907138                   I 4 C 0
s Propithecus_verreauxi.k141_158021                         43066  8 -     48185 GAT----TAGAA
i Propithecus_verreauxi.k141_158021                     I 4 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        249745  7 -    344369 -gt----gaaat
i Pteronura_brasiliensis.PteBra_flattened_line_1343     I 37 C 0
s Puma_concolor.QAVW01000427.1                          131539492  7 - 161321710 -gt----ggagt
i Puma_concolor.QAVW01000427.1                          I 37 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                20171  4 +     68503 --------AGGG
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 37 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1792273  7 +   2252614 -AT----CAGGA
i Rhinolophus_sinicus.LVEH01000179.1                    I 34 C 0
s Saiga_tatarica.SaiTat_scaffold_1069354                      167  4 -       709 --------AGGG
i Saiga_tatarica.SaiTat_scaffold_1069354                I 37 C 0
s Saimiri_boliviensis.NW_024100938.1                     15676224 12 -  43202129 GGTTGATTAGAA
i Saimiri_boliviensis.NW_024100938.1                    I 4 C 0
s Saimiri_cassiquiarensis.k141_808270                        8138 12 +     34089 GGTTGATTAGAA
i Saimiri_cassiquiarensis.k141_808270                   I 4 C 0
s Saimiri_macrodon.k141_2087127                              8079 12 -     60842 GGTTGATTAGAA
i Saimiri_macrodon.k141_2087127                         I 4 C 0
s Saimiri_oerstedii.k141_841116                              8172 12 +     67014 GGTTGATTAGAA
i Saimiri_oerstedii.k141_841116                         I 4 C 0
s Saimiri_sciureus.k141_1947592                              8150 12 +     60816 GGTTGATTAGAA
i Saimiri_sciureus.k141_1947592                         I 4 C 0
s Saimiri_ustus.k141_1282476                                 8087 12 -     76454 GGTTGATTAGAA
i Saimiri_ustus.k141_1282476                            I 4 C 0
s Sapajus_apella.ctg10                                   17344881  8 -  30362882 G----ATTAGAA
i Sapajus_apella.ctg10                                  I 4 C 0
s Sapajus_macrocephalus.k141_966464                         24202  8 -     62485 G----ATTAGAA
i Sapajus_macrocephalus.k141_966464                     I 4 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   39288  7 -    114521 -ct----ataaa
i Scalopus_aquaticus.ScaAqu_scaffold_9300               I 29 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            23240  7 +    739146 -GT----CAGGA
i Solenodon_paradoxus.SolPar_flattened_line_1012        I 31 C 0
s Sorex_araneus.JH798170.1                               17769700  7 -  27805282 -GT----TAAGA
i Sorex_araneus.JH798170.1                              I 28 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             238299  7 -    276980 -gt----gaaat
i Spilogale_gracilis.SpiGra_flattened_line_905          I 46 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            32460  7 +     62062 -gt----ggagt
i Suricata_suricatta.SurSur_flattened_line_20339        I 37 C 0
s Symphalangus_syndactylus.tarseq_24                        18466 12 -  13920577 GATTAATTAGAA
i Symphalangus_syndactylus.tarseq_24                    I 4 C 0
s Tapirus_indicus.TapInd_scaffold_176                      810458  7 +   1148477 -AT----TAGGA
i Tapirus_indicus.TapInd_scaffold_176                   I 34 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  61100  7 +     99546 -AT----TAGGA
i Tapirus_terrestris.TapTer_scaffold_14939              I 34 C 0
s Tarsius_lariang.k141_609102                               31047  8 +     42269 GAT----TAGAA
i Tarsius_lariang.k141_609102                           I 5 C 0
s Tarsius_wallacei.k141_48636                               64356  8 +     65473 GAT----TAGAA
i Tarsius_wallacei.k141_48636                           I 5 C 0
s Theropithecus_gelada.CM009951.1                       194011586  9 - 194193292 ---TGATTAGAA
i Theropithecus_gelada.CM009951.1                       I 3 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   9211  4 +     90398 --------ACAA
i Tragulus_javanicus.TraJav_scaffold_14717              I 33 C 0
s Trichechus_manatus.JH594618.1                          16088937  7 +  31416278 -AT----CAGGA
i Trichechus_manatus.JH594618.1                         I 34 I 564
s Tupaia_chinensis.KB320831.1                             2797436  7 -   3938065 -AT----TAGAA
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    9370  7 +     13056 -AT----TAAAA
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69316855  7 -  96451834 -AT----TAGGA
i Tursiops_truncatus.MRVK01000923.1                     I 34 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   9822  7 +     10241 -CT----GTAAA
i Uropsilus_gracilis.UroGra_scaffold_69449              I 30 C 0
s Ursus_maritimus.KK498671.1                              6519951  7 +  28682327 -gt----gaaat
i Ursus_maritimus.KK498671.1                            I 37 C 0
s Varecia_rubra.k141_432109                                  9066  8 -     20643 GAC----TAGAA
i Varecia_rubra.k141_432109                             I 4 C 0
s Varecia_variegata.k141_775891                             28601  8 -     33872 GAC----TAGAA
i Varecia_variegata.k141_775891                         I 4 C 0
s Vicugna_pacos.KN269600.1                                1527888  7 -   2331223 -AT----TAGGA
i Vicugna_pacos.KN269600.1                              I 34 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                143890  7 -    281493 -gt----gaaat
i Vulpes_lagopus.VulLag_flattened_line_2045             I 33 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        219335  7 -    227762 -at----gaaat
i Zalophus_californianus.ZalCal_flattened_line_4097     I 33 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            1599  7 -     13665 -At----tagga
i Ziphius_cavirostris.ZipCav_flattened_line_60625       I 34 C 0
e Eptesicus_fuscus.JH977687.1                             4708429 237 +   6522550 I
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Petromus_typicus.PetTyp_scaffold_33007                    16921  0 -     36578 C
e Dinomys_branickii.DinBra_scaffold_1996                   158442 1030 +    228994 I
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           4051 456 -      6963 I
e Oryctolagus_cuniculus.CM000803.1                      141878516 2929 + 163896628 I
e Ochotona_princeps.JH802095.1                            4996729 2205 -  23139505 I
e Lepus_americanus.LepAme_scaffold_62849                    15480 2946 +     22452 I
e Perognathus_longimembris.PerPac_flattened_line_19359       1614 38 +     49596 I
e Dipodomys_stephensi.DipSte_scaffold_84338                  1789 28 -     11986 I
e Dipodomys_ordii.KN672545.1                              3659429 30 +   4240102 I
e Tonatia_saurophila.TonSau_scaffold_3334                  137563 275 -    259118 I
e Tamandua_tetradactyla.TamTet_scaffold_26877               16259 379 +     45698 I
e Tadarida_brasiliensis.TadBra_scaffold_61492                1822 242 +     20549 I
e Sus_scrofa.CM000824.4                                 189273670 1086 + 218635234 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Pteronotus_parnellii.KE867983.1                            5588 252 -     27784 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             6589 379 -      8794 I
e Myotis_myotis.MyoMyo_scaffold_6123                        13515 236 +     66751 I
e Myotis_lucifugus.GL429887.1                             3468272 238 -   3747815 I
e Myotis_davidii.KB114863.1                               5022194 233 +   6462685 I
e Myotis_brandtii.KE161952.1                               970769 237 +   8389877 I
e Murina_feae.MurFea_scaffold_2254                          23900 236 -    100666 I
e Mormoops_blainvillei.MorMeg_scaffold_2952                162937 259 +    265003 I
e Miniopterus_schreibersii.MinSch_scaffold_24116            36998 214 +     45743 I
e Miniopterus_natalensis.LDJU01000022.1                   8212509 213 +  10048721 I
e Micronycteris_hirsuta.MicHir_scaffold_37978               24387 274 -     32043 I
e Lasiurus_borealis.LasBor_scaffold_59542                    5042 241 +     26176 I
e Elephantulus_edwardii.JH947210.1                        7830035 1277 +  15467074 I
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Echinops_telfairi.JH980316.1                           22999931  2 -  44670279 I
e Desmodus_rotundus.KZ672188.1                           18700517 262 -  18957592 I
e Dasypus_novemcinctus.JH568778.1                          185121 383 -   6883506 I
e Choloepus_hoffmanni.KN194586.1                           763329 503 +    964067 I
e Choloepus_didactylus.ChoDid_scaffold_36182                18024 504 -     21363 I
e Carollia_perspicillata.CarPer_scaffold_4436               61226 261 +     67245 I
e Artibeus_jamaicensis.ArtJam_scaffold_41619                10440 261 -     29036 I
e Anoura_caudifer.AnoCau_scaffold_422                      392020 257 -    631301 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           20901  0 -    119109 C
e Glis_glis.GliGli_scaffold_79770                           15993  0 -     18683 C
e Zapus_hudsonius.ZapHud_scaffold_64392                     20218  0 -     20485 C
e Jaculus_jaculus.JH725517.1                              8577088  0 +  11848649 C
e Hylobates_pileatus_a.tarseq_592                             35773 13 -     60944 I
e Allactaga_bullata.AllBul_scaffold_70162                   21404  0 -     22067 C
e Microtus_ochrogaster.CM001673.1                        22823881  0 -  98408828 C
e Xerus_inauris.XerIna_scaffold_7898                       128400 2868 -    134049 I
e Trachypithecus_pileatus.k141_1022309                       5226  0 +     13828 C
e Trachypithecus_phayrei.ctg3                            44662914  0 -  44834318 C
e Trachypithecus_obscurus.k141_1115109                       8130  0 -     28054 C
e Trachypithecus_melamera.k141_699241                        2986  0 -     24393 C
e Trachypithecus_leucocephalus.k141_381681                   3005  0 +     12481 C
e Trachypithecus_laotum.k141_760702                          4719  0 +     14371 C
e Trachypithecus_hatinhensis.k141_504423                     6067  0 -     15592 C
e Trachypithecus_germaini.k141_868450                        3883  0 -     11566 C
e Trachypithecus_geei.k141_670367                           46082  0 -     54611 C
e Trachypithecus_francoisi.k141_768164                       4689  0 -     14244 C
e Trachypithecus_cristatus.k141_1011511                      5261  0 -     12939 C
e Trachypithecus_crepusculus.k141_1588528                   23360  0 -     32910 C
e Trachypithecus_auratus.k141_738098                        29800  0 +     38948 C
e Spermophilus_dauricus.KZ294190.1                        2243603  0 +   2842873 C
e Sigmodon_hispidus.SigHis_scaffold_11332                  104689  0 -    120886 C
e Semnopithecus_vetulus.k141_1143185                        16479  0 +     30600 C
e Semnopithecus_schistaceus.k141_387461                     33457  0 +     42640 C
e Semnopithecus_priam.k141_410937                           40312  0 +     46263 C
e Semnopithecus_johnii.k141_785014                         121532  0 +    130994 C
e Semnopithecus_hypoleucos.k141_761524                      11528  0 +     20762 C
e Semnopithecus_entellus.k141_1572367                        6153  0 +     15331 C
e Rhinopithecus_strykeri.ctg4                            44859307  0 -  45163003 C
e Rhinopithecus_bieti.k119_554384                            2917  0 -     17045 C
e Rattus_norvegicus.chr11                                13917336  0 +  90463843 C
e Pygathrix_nigripes_a.k141_101123                             8537  0 +     18040 C
e Pygathrix_nigripes_b.ctg79                                 6809148  0 +   6970761 C
e Pygathrix_cinerea.k141_374971                             32651  0 +     56732 C
e Psammomys_obesus.NESX01026517.1                           37921  0 +     77221 C
e Presbytis_mitrata.k141_860013                              8661  0 +     14865 C
e Presbytis_comata.k141_672698                               8546  0 -     15069 C
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000036.1               26743271  0 +  26888534 C
e Piliocolobus_kirkii.k141_929665                            4788  0 +      7694 C
e Piliocolobus_gordonorum.k141_1270531                       5421  0 -     17985 C
e Piliocolobus_badius.k141_1987485                           4802  0 -      5908 C
e Peromyscus_maniculatus.KI615518.1                       4955125  0 -   8017169 C
e Onychomys_torridus.OnyTor_scaffold_12578                  42756  0 +     62360 C
e Ondatra_zibethicus.OndZib_scaffold_6821                  130071  0 +    145789 C
e Octodon_degus.JH651621.1                                3687420 1881 +  10294119 I
e Nasalis_larvatus.k141_153429                              11264  0 +     48152 C
e Nannospalax_galili.KL201303.1                            119867  0 +    362372 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     91920 1922 -    117718 I
e Muscardinus_avellanarius.MusAve_scaffold_9643             14525  0 +     98495 C
e Mus_spretus.CM004110.1                                 74336277  0 +  97876770 C
e Mus_pahari.LT608305.1                                  67559927  0 +  89017189 C
e Mus_musculus.chr16                                     75493550  0 +  98207768 C
e Mus_caroli.LT608236.1                                  70771497  0 +  92629107 C
e Mesocricetus_auratus.KB708139.1                         1051192  0 -  26018355 C
e Meriones_unguiculatus.MerUng_scaffold_52233               15570  0 +     15977 C
e Marmota_marmota.CZRN01000005.1                         36877588  0 +  64221397 C
e Ictidomys_tridecemlineatus.JH393315.1                   7129728  0 +  13083262 C
e Hystrix_cristata.HysCri_scaffold_50788                     7688 1865 +     22540 I
e Heterocephalus_glaber.JH602058.1                        2560252  0 +  31725842 C
e Graphiurus_murinus.GraMur_scaffold_4493                   79386  0 +    118900 C
e Fukomys_damarensis.KN123630.1                          13895732  0 -  19261668 C
e Ellobius_talpinus.LOJH01198462.1                           1213  0 -      1901 C
e Ellobius_lutescens.LOEQ01003611.1                        243471  0 -    369425 C
e Dolichotis_patagonum.DolPat_scaffold_14102                39604  0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             61584  0 -    236241 C
e Cuniculus_paca.CunPac_flattened_line_16637                20446  0 +     26546 C
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 32592 1717 -     67205 I
e Ctenodactylus_gundi.CteGun_scaffold_447                  213664  0 -    956709 C
e Cricetulus_griseus.LT883672.1                          53034667  0 +  72327488 C
e Cricetomys_gambianus.CriGam_scaffold_949                 282297  0 -    399297 C
e Colobus_polykomos.k141_1406057                            19335  0 +     23629 C
e Colobus_guereza.LG08                                  147667351  0 + 156195979 C
e Colobus_angolensis.KN985967.1                          10889423  0 +  10971483 C
e Chinchilla_lanigera.JH721867.1                         15963245 964 +  43084221 I
e Cavia_tschudii.CavTsc_scaffold_488                       177725 1742 +    436027 I
e Cavia_porcellus.DS562889.1                             15799553 1742 -  24440124 I
e Cavia_aperea.AVPZ01000278.1                            15787615 1741 -  24422027 I
e Acomys_cahirinus.AcoCah_scaffold_1625                    117433  0 -    189883 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               17208  8 +    209709 T-T---TAGTA----A
s Acinonyx_jubatus.LLWD01000356.1                         2038978  8 +   3721120 t-t---aagta----a
i Acinonyx_jubatus.LLWD01000356.1                       C 0 I 221
s Ailuropoda_melanoleuca.LNAT01000321.1                  10662660  8 +  23371972 t-t---aaaaa----a
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 I 231
s Ailurus_fulgens.LNAC01000003.1                          7099446  8 -  16596857 t-c---aaaaa----a
i Ailurus_fulgens.LNAC01000003.1                        C 0 I 226
s Allenopithecus_nigroviridis.k141_2469532                   5071  8 -     60446 T-T---TAGTA----A
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         5788  8 -     29318 T-T---TAGTA----A
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         4726  8 +     38766 T-T---TAGTA----A
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          5682  8 -     80423 T-T---TAGTA----A
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                               677 11 +     19852 T-TTAGTAGTA----A
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                2933 11 -     12443 T-TTAGTAGTA----A
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                              232 11 +      5070 T-TTAGTAGTA----A
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_macconnelli.k141_2318944                          2716 11 -     24210 T-TTAGTAGTA----A
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           29298 11 -     30219 T-TTAGTAGTA----A
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_405616                              5134 11 +     16794 T-TTAGTAGTA----A
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                             266 11 -      1470 T-TTAGTAGTA----A
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             4411 11 -      9835 T-TTAGTAGTA----A
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3525183  8 +   4113121 T-T---CAGTG----G
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             2614  8 +     55446 T-T---CAGTG----G
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 66026  8 +     78111 T-T---TAGTA----A
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            8972  8 +     22701 T-T---TAGTA----A
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5752930  8 +   9889416 T-T---Ttgta----a
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             9528  8 -    104377 T-T---TTGTA----A
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               9535  8 +     23246 T-T---TTGTA----A
i Aotus_vociferans.k141_718647                          C 0 C 0
s Arctocebus_calabarensis.k141_587554                        5837  8 +      9265 T-T---CAGTA----A
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9542819 11 +  39197703 T-TTAGTAGTA----A
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             64092 11 +     85812 T-TTAGTAGTA----A
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                15105 11 +     89302 T-TTAGTAGTA----A
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             19606 11 -     58268 T-TTAGTAGTA----A
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             67600 11 +    119057 T-TTAGTAGTA----A
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               9569 11 -     25888 T-TTAGTAGTA----A
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                10612  8 -     16375 T-T---CAGTA----A
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               4228  8 +      6337 T-T---CAGTA----A
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26383647  8 +  51448160 t-t---tagtg----a
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        8820  8 -     13118 T-T---TAGTG----A
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   47645  8 -     72089 T-T---CAGTG----G
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   301789  8 -   6870073 T-T---CAGTG----G
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22955887  8 + 161108492 T-T---CAGTG----G
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     418152  8 +    998990 T-T---CGGTG----G
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22664541  8 + 158972876 T-T---CAGTG----G
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               674304  8 +   1914593 T-T---CAGTG----G
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               117475  8 -    171031 T-T---TAGTA----A
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 16495  8 +    125063 T-T---TAGTA----A
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                18542  8 -    216513 T-T---TAGTA----A
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       11085  8 -    134917 T-T---TAGTA----A
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3222785  8 -   8989139 T-T---CAGTG----A
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           400487  8 -  15254737 T-T---CAGTG----A
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2976223  8 +   6889770 T-T---CAGTG----A
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11525820  4 +  39901454 t-t---ta--------
i CanFam4.chr31                                         C 0 I 225
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   20794  4 +     87036 t-t---ta--------
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 I 225
s Canis_lupus_dingo.QKWQ01001993.1                       11272503  4 -  35597290 t-t---ta--------
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 I 225
s Canis_lupus_familiaris.chr31                           11095214  4 +  39895921 t-t---ta--------
i Canis_lupus_familiaris.chr31                          C 0 I 225
s Canis_lupus_orion.HG994411.1                           16461999  4 -  44759192 t-t---ta--------
i Canis_lupus_orion.HG994411.1                          C 0 I 225
s Capra_aegagrus.CM003214.1                              21330263  8 + 157394656 T-T---CAGTG----G
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135711480  8 - 157403528 T-T---CAGTG----G
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          313198  7 +    345090 T-T---TA-TA----a
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   162342 12 -    276539 T-T---CAGTATTTCA
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18894307  8 -  29618158 T-T---TAGAA----A
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                11851  8 -     26817 T-T---TAGAA----A
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                16094  8 +     25043 T-T---TAGAA----A
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                        12202  7 +     21754 T-T---TA-TA----A
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4367227  8 +   7569818 T-T---CAGTA----A
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         6984  8 -      9338 T-T---CAGTA----A
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6559012  8 +   6739814 T-T---Tagta----a
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      30489  8 +     60454 T-T---TAGTA----A
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          5693  8 -     21101 T-T---TAGTA----A
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         63003  8 -    107033 T-T---TAGTA----A
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        5864  8 -     17608 T-T---TAGTA----A
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          3029  8 +     45019 T-T---TAGTA----A
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           3091  8 +     15177 T-T---TAGTA----A
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          5913  8 +     16677 T-T---TAGTA----A
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           28101  8 +     35983 T-T---TAGTA----A
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11994632  8 +  12117833 T-T---TAGTA----A
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46481393  8 +  46592721 T-T---TAGTC----A
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      44944  8 -     45581 T-T---TAGTC----A
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       5925  8 +     35577 T-T---TAGTA----A
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        5719  8 -     25661 T-T---TAGTA----A
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        5677  8 -     17744 T-T---TAGTC----A
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        25262  8 +     37128 T-T---TAGTA----A
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           62840  8 -     68416 T-T---CAGTA----A
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                           11941  8 +     13308 T-T---CAGTA----A
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             9132  8 -     18223 T-T---TAGTA----A
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                               871  8 +    188999 T-T---TAGTA----A
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           45170  8 +     57117 T-T---TAGTA----A
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          49849  8 +     54541 T-T---TAGTA----A
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chiropotes_israelita.k141_1189915                         74654  8 +    196370 T-T---TAGTA----A
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          18835  8 +     40510 T-T---TAGTA----A
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15143446  8 -  15256731 T-T---TAGTC----A
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      37910  8 -     53260 T-T---TAGTC----A
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101148469  8 + 101219884 T-T---TAGtc----a
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_629495              1879  8 -      3120 T-C---TAATA----A
i Chrysochloris_asiatica.ChrAsi_scaffold_629495         N 0 C 0
s Condylura_cristata.JH655880.1                          60621854  7 +  78930452 --t---caatt----a
i Condylura_cristata.JH655880.1                         C 0 I 2
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         1404  8 -      5782 T-T---CAGTG----A
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              1288  8 -     22648 T-T---CAATA----A
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            56981  8 -     70449 t-t---aatta----a
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 I 203
s Daubentonia_madagascariensis.ctg11                     16848768  8 +  31942871 T-T---CAGTA----A
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80040273  8 -  96802777 T-T---TAGTG----A
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 325876  8 +    993696 T-T---CAGTA----a
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   6516  8 +    151128 T-T---CAGTA----A
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1495861  8 +   1727528 T-T---CAGTG----G
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Enhydra_lutris.KZ291749.1                              85876901  8 +  99434291 t-c---aaaaa----a
i Enhydra_lutris.KZ291749.1                             C 0 I 225
s Equus_asinus.JREZ01000062.1                             5856242  8 -   7175178 T-T---CAGTA----A
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13354742  8 +  41866177 T-T---CAGTA----A
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          16232  8 +     92910 T-T---CAGTA----A
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11540707  8 +  16010500 T-T---TAATA----g
i Erinaceus_europaeus.JH835290.1                        C 0 I 1
s Erythrocebus_patas.Contig8                             48780480  8 -  48907691 T-T---TAGTC----A
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          318490  8 +    330699 T-T---TAGTG----A
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             64947  8 +     89355 T-T---TAGTG----A
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              8922  8 +     13586 T-T---CAGTA----A
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_1015201                              2185  8 -      4292 T-T---CAGTA----A
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            15318  8 +     36558 A-T---CAGTA----A
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            11643  8 +     60246 T-T---CAGTA----A
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                15126  8 +    109717 T-T---CAGTA----A
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 3111  8 -     19505 T-T---CAGTA----A
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                19783  8 +     27497 T-T---CAATA----A
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           22239  8 +     26808 T-T---CAGTA----A
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                36974  8 +     46535 T-T---CAGTA----A
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              19713  8 -     29447 T-T---CAGTA----A
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129898397  8 - 159252932 t-t---aagta----a
i Felis_catus.CM001386.2                                C 0 I 221
s Felis_catus_fca126.CM031420.1                         129285365  8 - 158578461 t-t---aagta----a
i Felis_catus_fca126.CM031420.1                         C 0 I 221
s Felis_nigripes.FelNig_flattened_line_8080                 26460  8 +     52776 t-t---aagta----a
i Felis_nigripes.FelNig_flattened_line_8080             C 0 I 221
s Galago_moholi.ctg555                                     214722  8 -    847004 T-T---CAGTA----A
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           17080  8 -     43889 T-T---CAGTA----A
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          14186  8 +     27357 T-T---CAGTA----A
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               159216  8 +    324696 T-T---CAGTA----A
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    185659  8 -    189561 T-T---CAGTG----G
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Gorilla_beringei.k141_111300                               8923  8 -     14630 T-T---TAGTA----A
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119656023  8 - 195582420 T-T---tagta----a
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         5706  8 +     10286 T-T---CAGTA----A
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             4184  8 -     11661 T-T---CAGTA----A
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             9511  8 +     56096 T-T---CAGTA----A
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        32760  8 -     42470 T-T---CAGTA----A
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        49386  8 -     54384 T-T---CAGTA----A
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              22132  8 +     53719 t-t---aagta----a
i Helogale_parvula.HelPar_flattened_line_22962          C 0 I 196
s Hemitragus_hylocrius.HemHyl_scaffold_16669                32533  8 -     91191 T-T---CAGTG----G
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               62517  9 +     73687 TCC---TAGTA----A
i Heterohyrax_brucei.HetBruBak_scaffold_25354           I 1157 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              150271  8 +    277961 G-T---TCGTG----A
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      282675  8 -    477199 T-T---CAGTG----A
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959                444  8 +     26078 T-T---CAGTG----A
i Hipposideros_galeritus.HipGal_scaffold_52959          C 0 C 0
s Hoolock_leuconedys.ctg315                                   349908  8 +    431944 T-T---TAGTA----A
i Hoolock_leuconedys.ctg315                                C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 22706  8 -     67322 t-t---aggta----a
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 I 219
s Hylobates_abbotti.k141_1816750                             1385  8 +      3202 T-T---TAGTA----A
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1633646                              1355  8 -      2102 T-T---TAGTA----A
i Hylobates_agilis.k141_1633646                         C 0 C 0
s Hylobates_klossii.k141_468230                              2871  8 +      5464 T-T---TAGTA----A
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14628220  8 -  25970782 T-T---TAGTA----A
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                             771  8 +      4161 T-T---TAGTA----A
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Indri_indri.k141_2197838                                   1185  8 +      3484 T-T---CAGTA----A
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              12485  8 +     17520 T-T---TAGTG----A
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               27066  8 +     37189 T-T---TAGTG----A
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          53688 11 -    147782 T-TTAGCAGAA----A
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lemur_catta.scaffold_1                                258411058  8 - 285822530 T-T---CAGTA----A
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        28361  8 +     39228 T-T---CAGTA----A
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            57725  8 +     63517 T-T---CAGTA----A
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        36105  8 -     38897 T-T---CAGTA----A
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      2151  8 -     13103 T-T---CAGTA----A
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3090888  8 -   3498232 t-t---aaaaa----a
i Leptonychotes_weddellii.KB714749.1                    C 0 I 230
s Lipotes_vexillifer.KE558548.1                            139437  8 +   3060487 t-t---tagtg----a
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19252100  8 +  19376315 T-T---TAGTA----A
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           14625  8 +     84689 T-G---CAGTA----A
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3782364  8 +   6799190 T-G---CAGTA----A
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20598424  8 -  62548349 T-C---TAGTA----A
i Loxodonta_africana.GL010040.1                         I 464 C 0
s Lycaon_pictus.CM007556.1                               11094670  4 +  39895028 t-t---ta--------
i Lycaon_pictus.CM007556.1                              C 0 I 225
s Macaca_arctoides.k141_2201161                             23851  8 +     74745 T-T---TAGTA----A
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12710312  8 +  12821369 T-T---TAGTA----A
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                2886  8 -     26467 T-T---TAGTA----A
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           50757  8 +     63263 T-T---TAGTA----A
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 2867  8 -     26361 T-T---TAGTA----A
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 6057  8 -      7381 T-T---TAGTA----A
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  49286  8 -     79256 T-T---TAGTA----A
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196039384  8 + 196197964 T-T---Tagta----a
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11449554  8 +  11645122 T-T---Tagta----a
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   8240  8 -     46448 T-T---TAGTA----A
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                5902  8 -     13212 T-T---TAGTA----A
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 19583  8 -     55006 T-T---TAGTA----A
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43844698  8 +  43892939 T-T---TAGTA----A
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               20866  8 -     24607 T-T---TAGTA----A
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               8237  8 -     27140 T-T---TAGTA----A
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43441273  8 -  43563597 T-T---TAGTA----A
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4454077  8 -   4543643 T-T---TAGTA----A
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            149296  8 +    252755 T-T---CTGTA----A
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             39444  8 +     58827 T-T---CTGTA----A
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       65091  8 -    234502 T-T---CCATG----A
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             5792  8 -     87323 t-c---aaaaa----a
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 I 221
s Mesoplodon_bidens.MesBid_scaffold_96348                    2071  8 -     12939 T-T---TAGTG----A
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16514121  8 +  47401472 T-T---CACTA----A
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  41145  8 -     48017 T-C---TTATA----A
i Microgale_talazaci.MicTal_scaffold_34660              I 311 C 0
s Miopithecus_ogouensis.k141_2935907                         5819  8 +     29742 T-T---TAGTA----A
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        16384  8 -    104932 t-t---aaaaa----a
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 I 230
s Mirza_zaza.k141_593947                                     4803  8 -     12809 T-T---CAGTA----A
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 149866  8 +    154973 T-T---TAGTG----A
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  5879  8 -     19904 T-T---CAGTG----G
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  149812  8 -    168139 t-t---aagta----a
i Mungos_mungo.MunMun_flattened_line_8729               C 0 I 197
s Mustela_putorius.JH417978.1                             4427633  8 -  28371801 t-c---aaaaa----a
i Mustela_putorius.JH417978.1                           C 0 I 223
s Neomonachus_schauinslandi.NINY01007774.1                4489783  8 -  14209539 t-t---aaaaa----a
i Neomonachus_schauinslandi.NINY01007774.1              C 0 I 230
s Neophocaena_asiaeorientalis.KZ688543.1                  3954457  8 -   4490290 T-T---TAGTG----A
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Nomascus_annamensis.k141_1817463                            511  8 -      1070 T-T---TAGTA----A
i Nomascus_annamensis.k141_1817463                      C 0 C 0
s Nomascus_concolor.k141_226614                              4783  8 -      5092 T-T---TAGTA----A
i Nomascus_concolor.k141_226614                         C 0 I 172
s Nomascus_gabriellae.k141_1400361                            446  8 -      2203 T-T---TAGTA----A
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_2374                            2130  8 +      8673 T-T---TAGTA----A
i Nomascus_siki_b.tarseq_2374                       C 0 I 89
s Nomascus_siki_a.k141_421408                                   356  8 +     16235 T-T---TAGTA----A
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                37529  4 +   3668941 t-t---ta--------
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 I 230
s Nycticebus_bengalensis.LG16                            65571188  8 -  95554990 T-T---CAGTA----A
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_771591                            14597  8 +     16181 T-T---CAGTA----A
i Nycticebus_coucang.k141_771591                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65679400  8 +  89412551 T-T---CAGTA----A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Odobenus_rosmarus.KB229369.1                             684490  8 -   3126709 t-t---aaaaa----a
i Odobenus_rosmarus.KB229369.1                          C 0 I 225
s Odocoileus_virginianus.KZ101650.1                       1083311  8 +   1425656 T-T---CAGTG----G
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         41394  8 +     78940 T-T---CAGTG----G
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Orcinus_orca.KB316965.1                                 7228133  8 -   7562323 T-T---TAGTG----A
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              63915  8 -     66828 t-c---tagta----a
i Orycteropus_afer.OryAfe_flattened_line_13509          I 399 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      314674  4 -    505867 t-t---ta--------
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 I 224
s Otolemur_crassicaudatus.k141_505435                        4545  8 -     53940 T-T---CAGTA----A
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18012516  8 -  38779656 T-T---CAGTA----A
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134082323  8 - 275406953 T-T---CAGTG----G
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      83551  8 +    140051 T-T---CAGTG----G
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127578181  8 - 205426864 T-T---Tagta----a
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120155341  8 - 196562556 T-T---Tagta----a
i Pan_troglodytes.CM009241.2                            I 450 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  39388  8 +    295523 t-t---aagta----a
i Panthera_onca.PanOnc_flattened_line_1615              C 0 I 221
s Panthera_pardus.KV860323.1                              3643203  8 +  18214204 t-t---aagta----a
i Panthera_pardus.KV860323.1                            C 0 I 221
s Panthera_tigris.KE721879.1                              5032851  8 -   6340057 t-t---aagta----a
i Panthera_tigris.KE721879.1                            C 0 I 221
s Pantholops_hodgsonii.KE114631.1                         1071192  8 -   1292953 T-T---CAGTG----G
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188160062  8 - 188283584 T-A---Tagta----a
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              3152  8 +     25005 T-T---TAGTA----A
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47517434  8 +  47705337 T-A---TAGTA----A
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 71425  8 -    104429 T-T---TAGTA----A
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    9957  8 +     14967 T-A---TAGTA----A
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 5822  8 -      7628 T-A---TAGTA----A
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    120884  8 -    135482 t-t---aagta----a
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 I 218
s Perodicticus_ibeanus.k141_117958                          10210  8 -     23713 T-T---CAGTA----A
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           11350  8 +     61070 T-T---CAGTA----A
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              2598  8 +      8220 T-T---TAGTG----A
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           9066  8 +     21690 T-T---TAGTG----A
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       25781  8 +     44506 T-T---TAGTA----A
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        25994  8 +     67491 T-T---TAGTA----A
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      16233  8 -     98129 T-T---TAGTA----A
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     25833  8 +    147771 T-T---TAGTA----A
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         2469  8 -     43940 T-T---TAGTA----A
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          6552  8 -     55515 T-T---TAGTA----A
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         25906  8 +    152463 T-T---TAGTA----A
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       3714  8 -    119457 T-T---TAGTA----A
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         15629  8 +    134592 T-T---TAGTA----A
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          26216  8 -     75465 T-T---TAGTA----A
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              190804  8 -    373494 T-T---TAGTA----A
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19811451  8 +  19899266 T-T---TAGTA----A
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                3623  9 -      9567 TCC---TAGTA----A
i Procavia_capensis.ProCapCap_scaffold_149274           I 1156 C 0
s Prolemur_simus.MPIZ01000048.1                           6852432  8 +  12164890 T-T---CAGTA----A
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     21462  8 -     30946 T-T---CAGTA----A
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         7518  8 +     11805 T-T---CAGTA----A
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           46866  8 +     52369 T-T---CAGTA----A
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         39253  8 -     44753 T-T---CAGTA----A
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            21176  8 +     27322 T-T---CAGTA----A
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       20810  8 -     53241 T-T---CAGTA----A
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         43074  8 -     48185 T-T---CAGTA----A
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        249752  8 -    344369 t-c---aaaaa----a
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 I 225
s Puma_concolor.QAVW01000427.1                          131539499  8 - 161321710 t-t---aagta----a
i Puma_concolor.QAVW01000427.1                          C 0 I 221
s Rangifer_tarandus.RanTarSib_scaffold_24239                20175  8 +     68503 T-T---CAGTG----G
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1792280  8 +   2252614 T-T---CAGTG----a
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_1069354                      171  8 -       709 T-T---CAGTG----G
i Saiga_tatarica.SaiTat_scaffold_1069354                C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15676236  8 -  43202129 T-T---Tagta----a
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        8150  8 +     34089 T-T---TAGTA----A
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              8091  8 -     60842 T-T---TAGTA----A
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              8184  8 +     67014 T-T---TAGTA----A
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              8162  8 +     60816 T-T---TAGTA----A
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 8099  8 -     76454 T-T---TAGTA----A
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17344889  8 -  30362882 T-T---TAGTA----A
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         24210  8 -     62485 T-T---TAGTA----A
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   39295  6 -    114521 --t---cag-t----a
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 I 2
s Solenodon_paradoxus.SolPar_flattened_line_1012            23247  8 +    739146 T-T---CAGCA----A
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17769707  8 -  27805282 T-T---CAATa----a
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             238306  8 -    276980 t-t---aaaaa----a
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 I 193
s Suricata_suricatta.SurSur_flattened_line_20339            32467  8 +     62062 t-t---aagta----a
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 I 200
s Symphalangus_syndactylus.tarseq_24                        18478  8 -  13920577 T-T---TAGTA----A
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      810465  8 +   1148477 T-T---CAGTA----A
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  61107  8 +     99546 T-T---CAGTA----A
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               31055  7 +     42269 T-T---TA-TG----A
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               64364  7 +     65473 T-T---TA-TG----A
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194011595  8 - 194193292 T-T---Tagta----a
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   9215  8 +     90398 T-T---CAGTG----A
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16089508  8 +  31416278 T-C---tagta----a
i Trichechus_manatus.JH594618.1                         I 564 C 0
s Tupaia_chinensis.KB320831.1                             2797443  8 -   3938065 T-T---CAGTA----A
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    9377  8 +     13056 T-T---CAGTA----A
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69316862  8 -  96451834 T-T---TAGTG----A
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   9829  7 +     10241 --C---CAATA----A
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6519958  8 +  28682327 t-t---aaaaa----a
i Ursus_maritimus.KK498671.1                            C 0 I 231
s Varecia_rubra.k141_432109                                  9074  8 -     20643 T-T---CAGTA----A
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             28609  8 -     33872 T-T---CAGTA----A
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1527895  8 -   2331223 T-T---CAGTG----A
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                143897  4 -    281493 t-t---ta--------
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 I 228
s Zalophus_californianus.ZalCal_flattened_line_4097        219342  8 -    227762 t-t---aaaaa----a
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 I 225
s Ziphius_cavirostris.ZipCav_flattened_line_60625            1606  8 -     13665 t-t---tagtg----a
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Eptesicus_fuscus.JH977687.1                             4708429 237 +   6522550 I
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Petromus_typicus.PetTyp_scaffold_33007                    16921  0 -     36578 C
e Dinomys_branickii.DinBra_scaffold_1996                   158442 1030 +    228994 I
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           4051 456 -      6963 I
e Oryctolagus_cuniculus.CM000803.1                      141878516 2929 + 163896628 I
e Ochotona_princeps.JH802095.1                            4996729 2205 -  23139505 I
e Lepus_americanus.LepAme_scaffold_62849                    15480 2946 +     22452 I
e Perognathus_longimembris.PerPac_flattened_line_19359       1614 38 +     49596 I
e Dipodomys_stephensi.DipSte_scaffold_84338                  1789 28 -     11986 I
e Dipodomys_ordii.KN672545.1                              3659429 30 +   4240102 I
e Tonatia_saurophila.TonSau_scaffold_3334                  137563 275 -    259118 I
e Tamandua_tetradactyla.TamTet_scaffold_26877               16259 379 +     45698 I
e Tadarida_brasiliensis.TadBra_scaffold_61492                1822 242 +     20549 I
e Sus_scrofa.CM000824.4                                 189273670 1086 + 218635234 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Pteronotus_parnellii.KE867983.1                            5588 252 -     27784 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             6589 379 -      8794 I
e Myotis_myotis.MyoMyo_scaffold_6123                        13515 236 +     66751 I
e Myotis_lucifugus.GL429887.1                             3468272 238 -   3747815 I
e Myotis_davidii.KB114863.1                               5022194 233 +   6462685 I
e Myotis_brandtii.KE161952.1                               970769 237 +   8389877 I
e Murina_feae.MurFea_scaffold_2254                          23900 236 -    100666 I
e Mormoops_blainvillei.MorMeg_scaffold_2952                162937 259 +    265003 I
e Miniopterus_schreibersii.MinSch_scaffold_24116            36998 214 +     45743 I
e Miniopterus_natalensis.LDJU01000022.1                   8212509 213 +  10048721 I
e Micronycteris_hirsuta.MicHir_scaffold_37978               24387 274 -     32043 I
e Lasiurus_borealis.LasBor_scaffold_59542                    5042 241 +     26176 I
e Elephantulus_edwardii.JH947210.1                        7830035 1277 +  15467074 I
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Echinops_telfairi.JH980316.1                           22999931  2 -  44670279 I
e Desmodus_rotundus.KZ672188.1                           18700517 262 -  18957592 I
e Dasypus_novemcinctus.JH568778.1                          185121 383 -   6883506 I
e Choloepus_hoffmanni.KN194586.1                           763329 503 +    964067 I
e Choloepus_didactylus.ChoDid_scaffold_36182                18024 504 -     21363 I
e Carollia_perspicillata.CarPer_scaffold_4436               61226 261 +     67245 I
e Artibeus_jamaicensis.ArtJam_scaffold_41619                10440 261 -     29036 I
e Anoura_caudifer.AnoCau_scaffold_422                      392020 257 -    631301 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           20901  0 -    119109 C
e Glis_glis.GliGli_scaffold_79770                           15993  0 -     18683 C
e Zapus_hudsonius.ZapHud_scaffold_64392                     20218  0 -     20485 C
e Jaculus_jaculus.JH725517.1                              8577088  0 +  11848649 C
e Hylobates_pileatus_a.tarseq_592                             35773 13 -     60944 I
e Allactaga_bullata.AllBul_scaffold_70162                   21404  0 -     22067 C
e Microtus_ochrogaster.CM001673.1                        22823881  0 -  98408828 C
e Xerus_inauris.XerIna_scaffold_7898                       128400 2868 -    134049 I
e Trachypithecus_pileatus.k141_1022309                       5226  0 +     13828 C
e Trachypithecus_phayrei.ctg3                            44662914  0 -  44834318 C
e Trachypithecus_obscurus.k141_1115109                       8130  0 -     28054 C
e Trachypithecus_melamera.k141_699241                        2986  0 -     24393 C
e Trachypithecus_leucocephalus.k141_381681                   3005  0 +     12481 C
e Trachypithecus_laotum.k141_760702                          4719  0 +     14371 C
e Trachypithecus_hatinhensis.k141_504423                     6067  0 -     15592 C
e Trachypithecus_germaini.k141_868450                        3883  0 -     11566 C
e Trachypithecus_geei.k141_670367                           46082  0 -     54611 C
e Trachypithecus_francoisi.k141_768164                       4689  0 -     14244 C
e Trachypithecus_cristatus.k141_1011511                      5261  0 -     12939 C
e Trachypithecus_crepusculus.k141_1588528                   23360  0 -     32910 C
e Trachypithecus_auratus.k141_738098                        29800  0 +     38948 C
e Spermophilus_dauricus.KZ294190.1                        2243603  0 +   2842873 C
e Sigmodon_hispidus.SigHis_scaffold_11332                  104689  0 -    120886 C
e Semnopithecus_vetulus.k141_1143185                        16479  0 +     30600 C
e Semnopithecus_schistaceus.k141_387461                     33457  0 +     42640 C
e Semnopithecus_priam.k141_410937                           40312  0 +     46263 C
e Semnopithecus_johnii.k141_785014                         121532  0 +    130994 C
e Semnopithecus_hypoleucos.k141_761524                      11528  0 +     20762 C
e Semnopithecus_entellus.k141_1572367                        6153  0 +     15331 C
e Rhinopithecus_strykeri.ctg4                            44859307  0 -  45163003 C
e Rhinopithecus_bieti.k119_554384                            2917  0 -     17045 C
e Rattus_norvegicus.chr11                                13917336  0 +  90463843 C
e Pygathrix_nigripes_a.k141_101123                             8537  0 +     18040 C
e Pygathrix_nigripes_b.ctg79                                 6809148  0 +   6970761 C
e Pygathrix_cinerea.k141_374971                             32651  0 +     56732 C
e Psammomys_obesus.NESX01026517.1                           37921  0 +     77221 C
e Presbytis_mitrata.k141_860013                              8661  0 +     14865 C
e Presbytis_comata.k141_672698                               8546  0 -     15069 C
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000036.1               26743271  0 +  26888534 C
e Piliocolobus_kirkii.k141_929665                            4788  0 +      7694 C
e Piliocolobus_gordonorum.k141_1270531                       5421  0 -     17985 C
e Piliocolobus_badius.k141_1987485                           4802  0 -      5908 C
e Peromyscus_maniculatus.KI615518.1                       4955125  0 -   8017169 C
e Onychomys_torridus.OnyTor_scaffold_12578                  42756  0 +     62360 C
e Ondatra_zibethicus.OndZib_scaffold_6821                  130071  0 +    145789 C
e Octodon_degus.JH651621.1                                3687420 1881 +  10294119 I
e Nasalis_larvatus.k141_153429                              11264  0 +     48152 C
e Nannospalax_galili.KL201303.1                            119867  0 +    362372 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     91920 1922 -    117718 I
e Muscardinus_avellanarius.MusAve_scaffold_9643             14525  0 +     98495 C
e Mus_spretus.CM004110.1                                 74336277  0 +  97876770 C
e Mus_pahari.LT608305.1                                  67559927  0 +  89017189 C
e Mus_musculus.chr16                                     75493550  0 +  98207768 C
e Mus_caroli.LT608236.1                                  70771497  0 +  92629107 C
e Mesocricetus_auratus.KB708139.1                         1051192  0 -  26018355 C
e Meriones_unguiculatus.MerUng_scaffold_52233               15570  0 +     15977 C
e Marmota_marmota.CZRN01000005.1                         36877588  0 +  64221397 C
e Ictidomys_tridecemlineatus.JH393315.1                   7129728  0 +  13083262 C
e Hystrix_cristata.HysCri_scaffold_50788                     7688 1865 +     22540 I
e Heterocephalus_glaber.JH602058.1                        2560252  0 +  31725842 C
e Graphiurus_murinus.GraMur_scaffold_4493                   79386  0 +    118900 C
e Fukomys_damarensis.KN123630.1                          13895732  0 -  19261668 C
e Ellobius_talpinus.LOJH01198462.1                           1213  0 -      1901 C
e Ellobius_lutescens.LOEQ01003611.1                        243471  0 -    369425 C
e Dolichotis_patagonum.DolPat_scaffold_14102                39604  0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             61584  0 -    236241 C
e Cuniculus_paca.CunPac_flattened_line_16637                20446  0 +     26546 C
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 32592 1717 -     67205 I
e Ctenodactylus_gundi.CteGun_scaffold_447                  213664  0 -    956709 C
e Cricetulus_griseus.LT883672.1                          53034667  0 +  72327488 C
e Cricetomys_gambianus.CriGam_scaffold_949                 282297  0 -    399297 C
e Colobus_polykomos.k141_1406057                            19335  0 +     23629 C
e Colobus_guereza.LG08                                  147667351  0 + 156195979 C
e Colobus_angolensis.KN985967.1                          10889423  0 +  10971483 C
e Chinchilla_lanigera.JH721867.1                         15963245 964 +  43084221 I
e Cavia_tschudii.CavTsc_scaffold_488                       177725 1742 +    436027 I
e Cavia_porcellus.DS562889.1                             15799553 1742 -  24440124 I
e Cavia_aperea.AVPZ01000278.1                            15787615 1741 -  24422027 I
e Acomys_cahirinus.AcoCah_scaffold_1625                    117433  0 -    189883 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               17216  5 +    209709 AT-----G------C--T
s Acinonyx_jubatus.LLWD01000356.1                         2039207  7 +   3721120 aa-----c------ttgg
i Acinonyx_jubatus.LLWD01000356.1                       I 221 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    117433  3 -    189883 -------A------A--T
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10662899  5 +  23371972 aa-----c------t--g
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 231 C 0
s Ailurus_fulgens.LNAC01000003.1                          7099680  5 -  16596857 aa-----c------t--g
i Ailurus_fulgens.LNAC01000003.1                        I 226 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   21404  3 -     22067 -------G------C--T
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   5079  5 -     60446 AT-----A------C--T
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         5796  5 -     29318 AT-----A------C--T
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         4734  5 +     38766 AT-----A------C--T
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          5690  5 -     80423 AT-----A------C--T
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                               688  5 +     19852 AT-----G------C--T
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                2944  5 -     12443 AT-----G------C--T
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                              243  5 +      5070 AT-----G------C--T
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_macconnelli.k141_2318944                          2727  5 -     24210 AT-----G------C--T
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           29309  5 -     30219 AT-----G------C--T
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_405616                              5145  5 +     16794 AT-----G------C--T
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                             277  5 -      1470 AT-----G------C--T
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             4422  5 -      9835 AT-----G------C--T
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3525191 11 +   4113121 TTTTAGGAT-----T--T
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             2622 11 +     55446 TTTTAGGAT-----C--T
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 66034  5 +     78111 AT-----G------C--T
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            8980  5 +     22701 AT-----G------C--T
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5752938  5 +   9889416 at-----g------c--t
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             9536  5 -    104377 AT-----G------C--T
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               9543  5 +     23246 AT-----G------C--T
i Aotus_vociferans.k141_718647                          C 0 C 0
s Arctocebus_calabarensis.k141_587554                        5845  5 +      9265 TG-----A------C--G
i Arctocebus_calabarensis.k141_587554                   C 0 I 280
s Ateles_geoffroyi_b.tarseq_2582                             9542830  5 +  39197703 AT-----G------C--T
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             64103  5 +     85812 AT-----G------C--T
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                15116  5 +     89302 AT-----G------C--T
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             19617  5 -     58268 AT-----G------C--T
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             67611  5 +    119057 AT-----G------C--T
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               9580  5 -     25888 AT-----G------C--T
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                10620  5 -     16375 AG-----G------C--A
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               4236  5 +      6337 AG-----G------C--A
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26383655 11 +  51448160 ttttagga-----tt--t
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        8828 11 -     13118 TTTTagga-----tt--t
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   47653 11 -     72089 TTTTGGGAT-----T--T
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   301797 11 -   6870073 TTTTagga-----tt--t
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22955895 11 + 161108492 TTTTagga-----tt--t
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     418160 11 +    998990 TTTTagga-----tt--t
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22664549 11 + 158972876 TTTTagga-----tt--t
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               674312 11 +   1914593 TTTTagga-----tt--t
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               117483  5 -    171031 AT-----A------G--T
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 16503  5 +    125063 AT-----A------G--T
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                18550  5 -    216513 AT-----A------G--T
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       11093  5 -    134917 AT-----A------G--T
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3222793 11 -   8989139 TT-----TTaagatt--t
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           400495 11 -  15254737 TT-----TTaagatt--t
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2976231 11 +   6889770 TT-----TTaagatt--t
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11526049  5 +  39901454 aa-----c------c--a
i CanFam4.chr31                                         I 225 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   21023  5 +     87036 aa-----c------c--a
i Canis_lupus_VD.CanFam_VD_scaffold_16982               I 225 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11272732  5 -  35597290 aa-----c------c--a
i Canis_lupus_dingo.QKWQ01001993.1                      I 225 C 0
s Canis_lupus_familiaris.chr31                           11095443  5 +  39895921 aa-----c------c--a
i Canis_lupus_familiaris.chr31                          I 225 C 0
s Canis_lupus_orion.HG994411.1                           16462228  5 -  44759192 aa-----c------c--a
i Canis_lupus_orion.HG994411.1                          I 225 C 0
s Capra_aegagrus.CM003214.1                              21330271 11 + 157394656 TTTTAGGAT-----T--T
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135711488 11 - 157403528 TTTTAGGAT-----T--T
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          313205  5 +    345090 ag-----g------t--t
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   162354  5 -    276539 TG-----A------T--T
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 I 1
s Cebus_albifrons.Contig22                               18894315  5 -  29618158 AT-----G------C--t
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                11859  5 -     26817 AT-----G------C--T
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                16102  5 +     25043 AT-----G------C--T
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                        12209  5 +     21754 AG-----G------T--T
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4367235  5 +   7569818 ag-----a------t--t
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         6992  5 -      9338 AG-----A------T--T
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6559020  5 +   6739814 at-----g------c--t
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      30497  5 +     60454 AT-----A------C--T
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          5701  5 -     21101 AT-----G------C--T
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         63011  5 -    107033 AT-----G------C--T
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        5872  5 -     17608 AT-----A------C--T
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          3037  5 +     45019 AT-----A------C--T
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           3099  5 +     15177 AT-----A------C--T
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          5921  5 +     16677 AT-----A------C--T
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           28109  5 +     35983 AT-----A------C--T
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11994640  5 +  12117833 AT-----A------C--T
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46481401  5 +  46592721 AT-----A------C--T
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      44952  5 -     45581 AT-----A------C--T
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       5933  5 +     35577 AT-----A------C--T
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        5727  5 -     25661 AT-----A------C--T
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        5685  5 -     17744 AT-----A------C--T
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        25270  5 +     37128 AT-----A------C--T
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           62848  5 -     68416 AG-----G------C--A
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                           11949  5 +     13308 AG-----G------C--A
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             9140  5 -     18223 AT-----T------C--T
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                               879  5 +    188999 AT-----T------C--T
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           45178  5 +     57117 AT-----T------C--T
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          49857  5 +     54541 AT-----T------C--T
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chiropotes_israelita.k141_1189915                         74662  5 +    196370 AT-----G------C--T
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          18843  5 +     40510 AT-----G------C--T
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15143454  5 -  15256731 AT-----A------C--T
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      37918  5 -     53260 AT-----A------C--T
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101148477  5 + 101219884 at-----a------c--t
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_629495              1887  5 -      3120 AG-----A------C--T
i Chrysochloris_asiatica.ChrAsi_scaffold_629495         C 0 C 0
s Condylura_cristata.JH655880.1                          60621863  4 +  78930452 -a-----c------a--t
i Condylura_cristata.JH655880.1                         I 2 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         1412  5 -      5782 AG-----G------T--T
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 282297  3 -    399297 -------G------A--T
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53034667  3 +  72327488 -------G------A--T
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              1296  5 -     22648 AT-----C------C--T
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            57192  5 -     70449 aa-----c------t--g
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 203 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  213664  3 -    956709 -------G------C--T
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                20446  3 +     26546 -------g------a--g
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             61584  3 -    236241 -------g------a--g
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16848776  5 +  31942871 AG-----G------C--T
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80040281 11 -  96802777 TTTTagga-----tt--t
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 325884  5 +    993696 ag-----a------t--t
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   6524  5 +    151128 AG-----A------T--T
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                39604  2 -     73477 -------G------A---
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 I 21
s Elaphurus_davidianus.JRFZ01086400.1                     1495869 11 +   1727528 TTTTagga-----tt--t
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        243471  3 -    369425 -------G------A--T
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01198462.1                           1213  3 -      1901 -------G------A--T
i Ellobius_talpinus.LOJH01198462.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85877134  5 +  99434291 aa-----c------t--g
i Enhydra_lutris.KZ291749.1                             I 225 C 0
s Equus_asinus.JREZ01000062.1                             5856250  5 -   7175178 AG-----A------t--t
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13354750  5 +  41866177 AG-----A------t--t
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          16240  5 +     92910 AG-----A------t--t
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11540716  2 +  16010500 --------------c--t
i Erinaceus_europaeus.JH835290.1                        I 1 C 0
s Erythrocebus_patas.Contig8                             48780488  5 -  48907691 AT-----A------C--T
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          318498 11 +    330699 TTTTAGGAT-----T--T
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             64955 11 +     89355 TTTTAGGAT-----T--T
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              8930  5 +     13586 AG-----G------C--A
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_1015201                              2193  5 -      4292 AG-----G------C--A
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            15326  5 +     36558 AG-----G------C--A
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            11651  5 +     60246 AG-----G------C--A
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                15134  5 +    109717 AG-----G------C--A
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 3119  5 -     19505 AG-----G------C--A
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                19791  5 +     27497 AG-----G------C--A
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           22247  5 +     26808 AG-----G------C--A
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                36982  5 +     46535 AG-----G------C--A
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              19721  5 -     29447 AG-----G------C--A
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129898626  7 - 159252932 aa-----c------ttgg
i Felis_catus.CM001386.2                                I 221 C 0
s Felis_catus_fca126.CM031420.1                         129285594  7 - 158578461 aa-----c------ttgg
i Felis_catus_fca126.CM031420.1                         I 221 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 26689  7 +     52776 aa-----c------ttgg
i Felis_nigripes.FelNig_flattened_line_8080             I 221 C 0
s Fukomys_damarensis.KN123630.1                          13895732  3 -  19261668 -------g------a--a
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     214730  5 -    847004 TG-----G------C--G
i Galago_moholi.ctg555                                  C 0 I 238
s Galago_senegalensis.k141_964197                           17088  5 -     43889 TG-----G------C--G
i Galago_senegalensis.k141_964197                       C 0 I 242
s Galagoides_demidoff.k141_1769638                          14194  5 +     27357 TG-----G------C--G
i Galagoides_demidoff.k141_1769638                      C 0 I 279
s Galeopterus_variegatus.GalVar_scaffold_354               159224  5 +    324696 AA-----G------C--T
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    185667 11 -    189561 TTTTAGGa-----tt--t
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           15993  3 -     18683 -------a------c--t
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               8931  5 -     14630 AT-----G------C--T
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119656031  5 - 195582420 at-----g------c--t
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   79386  3 +    118900 -------a------c--t
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         5714  5 +     10286 AG-----G------C--A
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             4192  5 -     11661 AG-----G------C--A
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             9519  5 +     56096 AG-----G------C--A
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        32768  5 -     42470 AG-----G------C--A
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        49394  5 -     54384 AG-----G------C--A
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              22336  2 +     53719 --------------t--g
i Helogale_parvula.HelPar_flattened_line_22962          I 196 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                32541 11 -     91191 TTTTAGGAT-----T--T
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2560252  3 +  31725842 -------g------a--g
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               62526  5 +     73687 AG-----A------C--T
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              150279 11 +    277961 TTTTAGGGT-----T--T
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      282683  5 -    477199 Ag-----g------t--t
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959                452  5 +     26078 TG-----G------T--T
i Hipposideros_galeritus.HipGal_scaffold_52959          C 0 C 0
s Hoolock_leuconedys.ctg315                                   349916  5 +    431944 AT-----G------C--T
i Hoolock_leuconedys.ctg315                                C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 22933  5 -     67322 aa-----c------t--g
i Hyaena_hyaena.HyaHya_flattened_line_20729             I 219 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           20901  2 -    119109 -------G------A---
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 I 21
s Hylobates_abbotti.k141_1816750                             1393  5 +      3202 AT-----G------C--T
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1633646                              1363  5 -      2102 AT-----G------C--T
i Hylobates_agilis.k141_1633646                         C 0 C 0
s Hylobates_klossii.k141_468230                              2879  5 +      5464 AT-----G------C--T
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14628228  5 -  25970782 AT-----G------C--T
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                             779  5 +      4161 AT-----G------C--T
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7129728  3 +  13083262 -------a------a--t
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   1193  5 +      3484 AG-----G------C--A
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              12493 11 +     17520 TTTTAGGAT-----T--T
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8577088  3 +  11848649 -------g------c--t
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               27074 11 +     37189 TTTTAGGAT-----T--T
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          53699  5 -    147782 AT-----G------C--T
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lemur_catta.scaffold_1                                258411066  5 - 285822530 AG-----G------C--A
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        28369  5 +     39228 AG-----G------C--A
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            57733  5 +     63517 AG-----G------C--A
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        36113  5 -     38897 AG-----G------C--A
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      2159  5 -     13103 AG-----G------C--A
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3091126  5 -   3498232 aa-----c------t--a
i Leptonychotes_weddellii.KB714749.1                    I 230 C 0
s Lepus_americanus.LepAme_scaffold_62849                    18426  1 +     22452 -----------------t
i Lepus_americanus.LepAme_scaffold_62849                I 2946 C 0
s Lipotes_vexillifer.KE558548.1                            139445 11 +   3060487 ttttagga-----tt--t
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19252108  5 +  19376315 AT-----A------C--T
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           14633  5 +     84689 TG-----G------A--G
i Loris_lydekkerianus.k141_550999                       C 0 I 276
s Loris_tardigradus.ctg97                                 3782372  5 +   6799190 TG-----G------C--G
i Loris_tardigradus.ctg97                               C 0 I 276
s Loxodonta_africana.GL010040.1                          20598432  5 -  62548349 AG-----G------c--t
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11094899  5 +  39895028 aa-----c------c--a
i Lycaon_pictus.CM007556.1                              I 225 C 0
s Macaca_arctoides.k141_2201161                             23859  5 +     74745 AT-----A------C--T
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12710320  5 +  12821369 AT-----A------C--T
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                2894  5 -     26467 AT-----A------C--T
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           50765  5 +     63263 AT-----A------C--T
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 2875  5 -     26361 AT-----A------C--T
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 6065  5 -      7381 AT-----A------C--T
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  49294  5 -     79256 AT-----A------C--T
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196039392  5 + 196197964 at-----a------c--t
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11449562  5 +  11645122 at-----a------c--t
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   8248  5 -     46448 AT-----A------C--T
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                5910  5 -     13212 AT-----A------C--T
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 19591  5 -     55006 AT-----A------C--T
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43844706  5 +  43892939 AT-----A------C--T
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               20874  5 -     24607 AT-----A------C--T
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               8245  5 -     27140 AT-----A------C--T
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43441281  5 -  43563597 AT-----A------C--T
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4454085  5 -   4543643 AT-----A------C--T
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            149304  5 +    252755 TC-----C------T--a
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             39452  5 +     58827 TC-----C------T--A
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36877588  3 +  64221397 -------a------g--c
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       65099  5 -    234502 CG-----G------T--T
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             6021  5 -     87323 aa-----c------t--g
i Mellivora_capensis.MelCap_flattened_line_15433        I 221 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               15570  3 +     15977 -------G------A--T
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1051192  3 -  26018355 -------G------A--T
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    2079 11 -     12939 TTTTAGGAT-----T--T
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16514129  5 +  47401472 ag-----g------c--a
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  41153  5 -     48017 CG-----A------C--T
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22823881  3 -  98408828 -------G------A--T
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         5827  5 +     29742 AT-----A------C--T
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        16622  5 -    104932 aa-----c------t--a
i Mirounga_angustirostris.MirAng_flattened_line_8852    I 230 C 0
s Mirza_zaza.k141_593947                                     4811  5 -     12809 AG-----G------C--A
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 149874 11 +    154973 TTTTAGGAT-----T--T
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  5887 11 -     19904 TTTTAGGAT-----C--T
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  150017  2 -    168139 --------------t--g
i Mungos_mungo.MunMun_flattened_line_8729               I 197 C 0
s Mus_caroli.LT608236.1                                  70771497  3 +  92629107 -------G------A--G
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75493550  3 +  98207768 -------G------A--G
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67559927  3 +  89017189 -------G------A--G
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74336277  3 +  97876770 -------G------A--G
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             14525  3 +     98495 -------a------c--c
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4427864  5 -  28371801 aa-----c------t--g
i Mustela_putorius.JH417978.1                           I 223 C 0
s Nannospalax_galili.KL201303.1                            119867  3 +    362372 -------G------G--a
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4490021  5 -  14209539 aa-----c------t--a
i Neomonachus_schauinslandi.NINY01007774.1              I 230 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3954465 11 -   4490290 TTTTagga-----tt--t
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Nomascus_annamensis.k141_1817463                            519  5 -      1070 AT-----G------C--T
i Nomascus_annamensis.k141_1817463                      C 0 C 0
s Nomascus_concolor.k141_70405                                519  5 +      1153 AT-----G------C--T
i Nomascus_concolor.k141_70405                          I 24 C 0
s Nomascus_gabriellae.k141_1400361                            454  5 -      2203 AT-----G------C--T
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_1022                             473  5 -     11638 AT-----G------C--T
i Nomascus_siki_b.tarseq_1022                       I 24 C 0
s Nomascus_siki_a.k141_421408                                   364  5 +     16235 AT-----G------C--T
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                37763  5 +   3668941 aa-----c------c--a
i Nyctereutes_procyonoides.CAJHUB010000786.1            I 230 C 0
s Nycticebus_bengalensis.LG16                            65571196  5 -  95554990 TG-----G------T--G
i Nycticebus_bengalensis.LG16                           C 0 I 283
s Nycticebus_coucang.k141_771591                            14605  5 +     16181 TG-----G------T--G
i Nycticebus_coucang.k141_771591                        C 0 I 283
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65679408  5 +  89412551 TG-----G------T--G
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 I 281
s Odobenus_rosmarus.KB229369.1                             684723  5 -   3126709 aa-----c------t--g
i Odobenus_rosmarus.KB229369.1                          I 225 C 0
s Odocoileus_virginianus.KZ101650.1                       1083319 11 +   1425656 TTTTAgga-----tt--t
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         41402 11 +     78940 TTTTagga-----tt--t
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  130071  3 +    145789 -------T------A--T
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  42756  3 +     62360 -------G------T--T
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7228141 11 -   7562323 TTTTagga-----tt--t
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              63923  5 -     66828 ag-----G------C--T
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141881445  1 + 163896628 -----------------T
i Oryctolagus_cuniculus.CM000803.1                      I 2929 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      314902  5 -    505867 aa-----c------c--a
i Otocyon_megalotis.JAEUCK010005121.1                   I 224 C 0
s Otolemur_crassicaudatus.k141_505435                        4553  5 -     53940 TG-----G------T--G
i Otolemur_crassicaudatus.k141_505435                   C 0 I 276
s Otolemur_garnettii.GL873528.1                          18012524  5 -  38779656 TG-----G------C--G
i Otolemur_garnettii.GL873528.1                         C 0 I 279
s Ovis_aries.CM001582.2                                 134082331 11 - 275406953 TTTTAGGA-----tt--t
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      83559 11 +    140051 TTTTAGGAT-----T--T
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127578189  5 - 205426864 at-----g------c--t
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120155349  5 - 196562556 at-----g------c--t
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  39617  7 +    295523 aa-----c------ttgg
i Panthera_onca.PanOnc_flattened_line_1615              I 221 C 0
s Panthera_pardus.KV860323.1                              3643432  7 +  18214204 aa-----c------ttgg
i Panthera_pardus.KV860323.1                            I 221 C 0
s Panthera_tigris.KE721879.1                              5033080  7 -   6340057 aa-----c------ttgg
i Panthera_tigris.KE721879.1                            I 221 C 0
s Pantholops_hodgsonii.KE114631.1                         1071200 11 -   1292953 TTTTAGGA-----tt--t
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188160070  5 - 188283584 at-----a------c--t
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              3160  5 +     25005 AT-----A------C--T
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47517442  5 +  47705337 AT-----A------C--T
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 71433  5 -    104429 AT-----A------C--T
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    9965  5 +     14967 AT-----A------C--T
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 5830  5 -      7628 AT-----A------C--T
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    121110  5 -    135482 aa-----c------t--g
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 I 218 C 0
s Perodicticus_ibeanus.k141_117958                          10218  5 -     23713 TG-----A------C--G
i Perodicticus_ibeanus.k141_117958                      C 0 I 278
s Perodicticus_potto.k141_1136815                           11358  5 +     61070 TG-----A------C--G
i Perodicticus_potto.k141_1136815                       C 0 I 278
s Peromyscus_maniculatus.KI615518.1                       4955125  3 -   8017169 -------G------A--T
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    16921  3 -     36578 -------G------A--G
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              2606 11 +      8220 TTTTAGGAT-----T--T
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           9074 11 +     21690 TTTTAGGAT-----T--T
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       25789  5 +     44506 AT-----G------C--T
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        26002  5 +     67491 AT-----G------C--T
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      16241  5 -     98129 AT-----G------C--T
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     25841  5 +    147771 AT-----G------C--T
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         2477  5 -     43940 AT-----G------C--T
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          6560  5 -     55515 AT-----G------C--T
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         25914  5 +    152463 AT-----G------C--T
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       3722  5 -    119457 AT-----G------C--T
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         15637  5 +    134592 AT-----G------C--T
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          26224  5 -     75465 AT-----G------C--T
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              190812  5 -    373494 AT-----g------c--t
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19811459  5 +  19899266 AT-----G------C--T
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                3632  5 -      9567 AG-----A------C--T
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6852440  5 +  12164890 ag-----g------c--a
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     21470  5 -     30946 Ag-----g------c--a
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         7526  5 +     11805 AG-----G------C--A
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           46874  5 +     52369 AG-----G------C--A
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         39261  5 -     44753 AG-----G------C--A
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            21184  5 +     27322 AG-----G------C--A
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       20818  5 -     53241 AG-----G------C--A
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         43082  5 -     48185 AG-----G------C--A
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           37921  3 +     77221 -------G------A--T
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        249985  5 -    344369 aa-----c------t--g
i Pteronura_brasiliensis.PteBra_flattened_line_1343     I 225 C 0
s Puma_concolor.QAVW01000427.1                          131539728  7 - 161321710 aa-----c------ttgg
i Puma_concolor.QAVW01000427.1                          I 221 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                20183 11 +     68503 TTTTAGGAT-----T--T
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13917336  3 +  90463843 -------G------A--G
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1792288  5 +   2252614 ag-----g------t--t
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_1069354                      179 11 -       709 TTTTAGGAT-----T--T
i Saiga_tatarica.SaiTat_scaffold_1069354                C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15676244  5 -  43202129 at-----g------c--t
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        8158  5 +     34089 AT-----G------C--T
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              8099  5 -     60842 AT-----G------C--T
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              8192  5 +     67014 AT-----G------C--T
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              8170  5 +     60816 AT-----G------C--T
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 8107  5 -     76454 AT-----G------C--T
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17344897  5 -  30362882 AT-----G------C--T
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         24218  5 -     62485 AT-----G------C--T
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   39303  4 -    114521 -a-----c------c--t
i Scalopus_aquaticus.ScaAqu_scaffold_9300               I 2 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  104689  3 -    120886 -------G------A--T
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            23255  5 +    739146 AA-----G------C--T
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17769715  5 -  27805282 gt-----t------c--t
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2243603  3 +   2842873 -------a------a--t
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             238507  5 -    276980 aa-----c------t--g
i Spilogale_gracilis.SpiGra_flattened_line_905          I 193 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            32675  2 +     62062 --------------t--g
i Suricata_suricatta.SurSur_flattened_line_20339        I 200 C 0
s Symphalangus_syndactylus.tarseq_24                        18486  5 -  13920577 AT-----G------C--T
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      810473  5 +   1148477 AG-----A------T--T
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  61115  5 +     99546 AG-----A------T--T
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               31062  5 +     42269 AG-----G------T--T
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               64371  5 +     65473 AG-----G------T--T
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194011603  5 - 194193292 at-----a------c--t
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   9223 11 +     90398 TTTTAGGAT-----T--T
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16089516  5 +  31416278 ag-----a------c--t
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2797451  5 -   3938065 AG-----g------c--a
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    9385  5 +     13056 AG-----G------C--A
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69316870 11 -  96451834 TTTTagga-----tt--t
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   9836  4 +     10241 -A-----C------C--T
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6520197  5 +  28682327 aa-----c------t--g
i Ursus_maritimus.KK498671.1                            I 231 C 0
s Varecia_rubra.k141_432109                                  9082  5 -     20643 AG-----G------C--A
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             28617  5 -     33872 AG-----G------C--A
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1527903 11 -   2331223 TT-----TTaagatt--t
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                144129  5 -    281493 aa-----c------c--a
i Vulpes_lagopus.VulLag_flattened_line_2045             I 228 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        219575  5 -    227762 aa-----c------t--g
i Zalophus_californianus.ZalCal_flattened_line_4097     I 225 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     20218  3 -     20485 -------A------C--T
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            1614 11 -     13665 ttttagga-----tt--t
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Eptesicus_fuscus.JH977687.1                             4708429 237 +   6522550 I
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Dinomys_branickii.DinBra_scaffold_1996                   158442 1030 +    228994 I
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           4051 456 -      6963 I
e Ochotona_princeps.JH802095.1                            4996729 2205 -  23139505 I
e Perognathus_longimembris.PerPac_flattened_line_19359       1614 38 +     49596 I
e Dipodomys_stephensi.DipSte_scaffold_84338                  1789 28 -     11986 I
e Dipodomys_ordii.KN672545.1                              3659429 30 +   4240102 I
e Tonatia_saurophila.TonSau_scaffold_3334                  137563 275 -    259118 I
e Tamandua_tetradactyla.TamTet_scaffold_26877               16259 379 +     45698 I
e Tadarida_brasiliensis.TadBra_scaffold_61492                1822 242 +     20549 I
e Sus_scrofa.CM000824.4                                 189273670 1086 + 218635234 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Pteronotus_parnellii.KE867983.1                            5588 252 -     27784 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             6589 379 -      8794 I
e Myotis_myotis.MyoMyo_scaffold_6123                        13515 236 +     66751 I
e Myotis_lucifugus.GL429887.1                             3468272 238 -   3747815 I
e Myotis_davidii.KB114863.1                               5022194 233 +   6462685 I
e Myotis_brandtii.KE161952.1                               970769 237 +   8389877 I
e Murina_feae.MurFea_scaffold_2254                          23900 236 -    100666 I
e Mormoops_blainvillei.MorMeg_scaffold_2952                162937 259 +    265003 I
e Miniopterus_schreibersii.MinSch_scaffold_24116            36998 214 +     45743 I
e Miniopterus_natalensis.LDJU01000022.1                   8212509 213 +  10048721 I
e Micronycteris_hirsuta.MicHir_scaffold_37978               24387 274 -     32043 I
e Lasiurus_borealis.LasBor_scaffold_59542                    5042 241 +     26176 I
e Elephantulus_edwardii.JH947210.1                        7830035 1277 +  15467074 I
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Echinops_telfairi.JH980316.1                           22999931  2 -  44670279 I
e Desmodus_rotundus.KZ672188.1                           18700517 262 -  18957592 I
e Dasypus_novemcinctus.JH568778.1                          185121 383 -   6883506 I
e Choloepus_hoffmanni.KN194586.1                           763329 503 +    964067 I
e Choloepus_didactylus.ChoDid_scaffold_36182                18024 504 -     21363 I
e Carollia_perspicillata.CarPer_scaffold_4436               61226 261 +     67245 I
e Artibeus_jamaicensis.ArtJam_scaffold_41619                10440 261 -     29036 I
e Anoura_caudifer.AnoCau_scaffold_422                      392020 257 -    631301 I
e Hylobates_pileatus_a.tarseq_592                             35773 13 -     60944 I
e Xerus_inauris.XerIna_scaffold_7898                       128400 2868 -    134049 I
e Trachypithecus_pileatus.k141_1022309                       5226  0 +     13828 C
e Trachypithecus_phayrei.ctg3                            44662914  0 -  44834318 C
e Trachypithecus_obscurus.k141_1115109                       8130  0 -     28054 C
e Trachypithecus_melamera.k141_699241                        2986  0 -     24393 C
e Trachypithecus_leucocephalus.k141_381681                   3005  0 +     12481 C
e Trachypithecus_laotum.k141_760702                          4719  0 +     14371 C
e Trachypithecus_hatinhensis.k141_504423                     6067  0 -     15592 C
e Trachypithecus_germaini.k141_868450                        3883  0 -     11566 C
e Trachypithecus_geei.k141_670367                           46082  0 -     54611 C
e Trachypithecus_francoisi.k141_768164                       4689  0 -     14244 C
e Trachypithecus_cristatus.k141_1011511                      5261  0 -     12939 C
e Trachypithecus_crepusculus.k141_1588528                   23360  0 -     32910 C
e Trachypithecus_auratus.k141_738098                        29800  0 +     38948 C
e Semnopithecus_vetulus.k141_1143185                        16479  0 +     30600 C
e Semnopithecus_schistaceus.k141_387461                     33457  0 +     42640 C
e Semnopithecus_priam.k141_410937                           40312  0 +     46263 C
e Semnopithecus_johnii.k141_785014                         121532  0 +    130994 C
e Semnopithecus_hypoleucos.k141_761524                      11528  0 +     20762 C
e Semnopithecus_entellus.k141_1572367                        6153  0 +     15331 C
e Rhinopithecus_strykeri.ctg4                            44859307  0 -  45163003 C
e Rhinopithecus_bieti.k119_554384                            2917  0 -     17045 C
e Pygathrix_nigripes_a.k141_101123                             8537  0 +     18040 C
e Pygathrix_nigripes_b.ctg79                                 6809148  0 +   6970761 C
e Pygathrix_cinerea.k141_374971                             32651  0 +     56732 C
e Presbytis_mitrata.k141_860013                              8661  0 +     14865 C
e Presbytis_comata.k141_672698                               8546  0 -     15069 C
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000036.1               26743271  0 +  26888534 C
e Piliocolobus_kirkii.k141_929665                            4788  0 +      7694 C
e Piliocolobus_gordonorum.k141_1270531                       5421  0 -     17985 C
e Piliocolobus_badius.k141_1987485                           4802  0 -      5908 C
e Octodon_degus.JH651621.1                                3687420 1881 +  10294119 I
e Nasalis_larvatus.k141_153429                              11264  0 +     48152 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     91920 1922 -    117718 I
e Hystrix_cristata.HysCri_scaffold_50788                     7688 1865 +     22540 I
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 32592 1717 -     67205 I
e Colobus_polykomos.k141_1406057                            19335  0 +     23629 C
e Colobus_guereza.LG08                                  147667351  0 + 156195979 C
e Colobus_angolensis.KN985967.1                          10889423  0 +  10971483 C
e Chinchilla_lanigera.JH721867.1                         15963245 964 +  43084221 I
e Cavia_tschudii.CavTsc_scaffold_488                       177725 1742 +    436027 I
e Cavia_porcellus.DS562889.1                             15799553 1742 -  24440124 I
e Cavia_aperea.AVPZ01000278.1                            15787615 1741 -  24422027 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               17221 2 +    209709 A---T
s Acinonyx_jubatus.LLWD01000356.1                         2039214 2 +   3721120 g---a
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10662904 2 +  23371972 g---a
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7099685 2 -  16596857 g---a
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   5084 1 -     60446 A----
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         5801 1 -     29318 A----
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         4739 1 +     38766 A----
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          5695 1 -     80423 A----
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                               693 2 +     19852 A---T
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                2949 2 -     12443 A---T
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                              248 2 +      5070 A---T
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_macconnelli.k141_2318944                          2732 2 -     24210 A---T
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           29314 2 -     30219 A---T
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_405616                              5150 2 +     16794 A---T
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                             282 2 -      1470 A---T
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             4427 2 -      9835 A---T
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3525202 2 +   4113121 G---g
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             2633 2 +     55446 G---G
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 66039 2 +     78111 A---T
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            8985 2 +     22701 A---T
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5752943 2 +   9889416 a---t
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             9541 2 -    104377 A---T
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               9548 2 +     23246 A---T
i Aotus_vociferans.k141_718647                          C 0 C 0
s Arctocebus_calabarensis.k141_587554                        6130 2 +      9265 G---C
i Arctocebus_calabarensis.k141_587554                   I 280 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9542835 2 +  39197703 A---T
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             64108 2 +     85812 A---T
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                15121 2 +     89302 A---T
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             19622 2 -     58268 A---T
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             67616 2 +    119057 A---T
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               9585 2 -     25888 A---T
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                10625 2 -     16375 G---T
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               4241 2 +      6337 G---T
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26383666 2 +  51448160 g---g
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        8839 2 -     13118 g---g
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   47664 2 -     72089 G---G
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   301808 2 -   6870073 g---g
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22955906 2 + 161108492 g---g
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     418171 2 +    998990 g---g
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22664560 2 + 158972876 g---g
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               674323 2 +   1914593 g---g
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               117488 2 -    171031 A---T
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 16508 2 +    125063 A---T
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                18555 2 -    216513 A---T
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       11098 2 -    134917 A---T
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3222804 2 -   8989139 g---g
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           400506 2 -  15254737 g---g
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2976242 2 +   6889770 g---g
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11526054 2 +  39901454 g---a
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   21028 2 +     87036 g---a
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11272737 2 -  35597290 g---a
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11095448 2 +  39895921 g---a
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16462233 2 -  44759192 g---a
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21330282 2 + 157394656 G---g
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135711499 2 - 157403528 G---g
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          313210 2 +    345090 g---t
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   162360 2 -    276539 A---T
i Catagonus_wagneri.CatWag_scaffold_1305                I 1 C 0
s Cebus_albifrons.Contig22                               18894320 2 -  29618158 a---t
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                11864 2 -     26817 A---T
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                16107 2 +     25043 A---T
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                        12214 2 +     21754 G---T
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4367240 2 +   7569818 g---g
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         6997 2 -      9338 G---G
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6559025 1 +   6739814 a----
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      30502 1 +     60454 A----
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          5706 1 -     21101 A----
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         63016 1 -    107033 A----
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        5877 1 -     17608 A----
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          3042 1 +     45019 A----
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           3104 1 +     15177 A----
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          5926 1 +     16677 A----
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           28114 1 +     35983 A----
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11994645 1 +  12117833 A----
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46481406 1 +  46592721 A----
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      44957 1 -     45581 A----
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       5938 1 +     35577 A----
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        5732 1 -     25661 A----
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        5690 1 -     17744 A----
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        25275 1 +     37128 A----
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           62853 2 -     68416 T---T
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                           11954 2 +     13308 G---T
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             9145 2 -     18223 C---G
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                               884 2 +    188999 C---T
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           45183 2 +     57117 C---T
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          49862 2 +     54541 C---T
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chiropotes_israelita.k141_1189915                         74667 2 +    196370 A---T
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          18848 2 +     40510 A---T
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15143459 1 -  15256731 A----
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      37923 1 -     53260 A----
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101148482 1 + 101219884 a----
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_629495              1892 2 -      3120 A---C
i Chrysochloris_asiatica.ChrAsi_scaffold_629495         C 0 C 0
s Condylura_cristata.JH655880.1                          60621867 2 +  78930452 c---a
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         1417 2 -      5782 G---G
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              1301 1 -     22648 G----
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            57197 2 -     70449 g---a
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  213667 2 -    956709 T---T
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                20449 2 +     26546 t---t
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             61587 2 -    236241 t---t
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16848781 2 +  31942871 G---T
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80040292 2 -  96802777 g---g
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 325889 2 +    993696 g---g
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   6529 2 +    151128 G---G
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1495880 2 +   1727528 g---g
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Enhydra_lutris.KZ291749.1                              85877139 2 +  99434291 g---a
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Equus_asinus.JREZ01000062.1                             5856255 2 -   7175178 g---g
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13354755 2 +  41866177 g---g
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          16245 2 +     92910 g---g
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11540718 2 +  16010500 a---g
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48780493 1 -  48907691 A----
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          318509 2 +    330699 G---G
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             64966 2 +     89355 G---G
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              8935 2 +     13586 G---T
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_1015201                              2198 2 -      4292 G---T
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            15331 2 +     36558 G---T
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            11656 2 +     60246 G---T
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                15139 2 +    109717 G---T
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 3124 2 -     19505 G---T
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                19796 2 +     27497 G---T
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           22252 2 +     26808 G---T
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                36987 2 +     46535 G---T
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              19726 2 -     29447 G---T
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129898633 2 - 159252932 g---a
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129285601 2 - 158578461 g---a
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 26696 2 +     52776 g---a
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13895735 2 -  19261668 a---t
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     214973 2 -    847004 G---T
i Galago_moholi.ctg555                                  I 238 C 0
s Galago_senegalensis.k141_964197                           17335 2 -     43889 G---T
i Galago_senegalensis.k141_964197                       I 242 C 0
s Galagoides_demidoff.k141_1769638                          14478 2 +     27357 G---T
i Galagoides_demidoff.k141_1769638                      I 279 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               159229 5 +    324696 GGGCT
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    185678 2 -    189561 g---g
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           15996 2 -     18683 t---t
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               8936 2 -     14630 A---T
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119656036 2 - 195582420 a---t
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         5719 2 +     10286 G---T
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             4197 2 -     11661 G---T
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             9524 2 +     56096 G---T
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        32773 2 -     42470 G---T
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        49399 2 -     54384 G---T
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              22338 2 +     53719 g---a
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                32552 2 -     91191 G---G
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2560255 2 +  31725842 t---t
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               62531 2 +     73687 G---C
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              150290 2 +    277961 G---G
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      282688 2 -    477199 g---g
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959                457 2 +     26078 G---G
i Hipposideros_galeritus.HipGal_scaffold_52959          C 0 C 0
s Hoolock_leuconedys.ctg315                                   349921 2 +    431944 A---T
i Hoolock_leuconedys.ctg315                                C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 22938 2 -     67322 g---a
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hylobates_abbotti.k141_1816750                             1398 2 +      3202 A---T
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1633646                              1368 2 -      2102 A---T
i Hylobates_agilis.k141_1633646                         C 0 C 0
s Hylobates_klossii.k141_468230                              2884 2 +      5464 A---T
i Hylobates_klossii.k141_468230                         C 0 I 1
s Hylobates_pileatus_b.ContigUN                                 14628233 2 -  25970782 A---T
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                             784 2 +      4161 A---T
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7129731 2 +  13083262 t---a
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 I 116
s Indri_indri.k141_2197838                                   1198 2 +      3484 G---T
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              12504 2 +     17520 G---G
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               27085 2 +     37189 G---A
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          53704 2 -    147782 A---T
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lemur_catta.scaffold_1                                258411071 2 - 285822530 G---T
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        28374 2 +     39228 G---T
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            57738 2 +     63517 G---T
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        36118 2 -     38897 G---T
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      2164 2 -     13103 G---T
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3091131 2 -   3498232 g---a
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    18427 2 +     22452 c---t
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            139456 2 +   3060487 g---g
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19252113 1 +  19376315 A----
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           14914 2 +     84689 G---C
i Loris_lydekkerianus.k141_550999                       I 276 C 0
s Loris_tardigradus.ctg97                                 3782653 2 +   6799190 G---C
i Loris_tardigradus.ctg97                               I 276 C 0
s Loxodonta_africana.GL010040.1                          20598437 2 -  62548349 g---t
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11094904 2 +  39895028 g---a
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             23864 1 +     74745 A----
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12710325 1 +  12821369 A----
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                2899 1 -     26467 A----
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           50770 1 +     63263 A----
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 2880 1 -     26361 A----
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 6070 1 -      7381 A----
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  49299 1 -     79256 A----
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196039397 1 + 196197964 a----
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11449567 1 +  11645122 a----
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   8253 1 -     46448 A----
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                5915 1 -     13212 A----
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 19596 1 -     55006 A----
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43844711 1 +  43892939 A----
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               20879 1 -     24607 A----
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               8250 1 -     27140 A----
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43441286 1 -  43563597 A----
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4454090 1 -   4543643 A----
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            149309 2 +    252755 g---g
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             39457 2 +     58827 g---g
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36877591 2 +  64221397 t---a
i Marmota_marmota.CZRN01000005.1                        C 0 I 121
s Megaderma_lyra.MegLyr_scaffold_3562                       65104 2 -    234502 G---G
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             6026 2 -     87323 g---a
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    2090 2 -     12939 G---G
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16514134 2 +  47401472 g---t
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  41158 2 -     48017 A---T
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         5832 1 +     29742 A----
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        16627 2 -    104932 g---a
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     4816 2 -     12809 G---T
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 149885 2 +    154973 G---G
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  5898 2 -     19904 G---G
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  150019 2 -    168139 g---a
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             14528 2 +     98495 c---t
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4427869 2 -  28371801 g---a
i Mustela_putorius.JH417978.1                           C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4490026 2 -  14209539 g---a
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3954476 2 -   4490290 g---g
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Nomascus_annamensis.k141_1817463                            524 2 -      1070 A---T
i Nomascus_annamensis.k141_1817463                      C 0 C 0
s Nomascus_concolor.k141_70405                                524 2 +      1153 A---T
i Nomascus_concolor.k141_70405                          C 0 C 0
s Nomascus_gabriellae.k141_1400361                            459 2 -      2203 A---T
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_1022                             478 2 -     11638 A---T
i Nomascus_siki_b.tarseq_1022                       C 0 C 0
s Nomascus_siki_a.k141_421408                                   369 2 +     16235 A---T
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                37768 2 +   3668941 g---a
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65571484 2 -  95554990 G---T
i Nycticebus_bengalensis.LG16                           I 283 C 0
s Nycticebus_coucang.k141_771591                            14893 2 +     16181 G---T
i Nycticebus_coucang.k141_771591                        I 283 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65679694 2 +  89412551 G---T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     I 281 C 0
s Odobenus_rosmarus.KB229369.1                             684728 2 -   3126709 g---a
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1083330 2 +   1425656 g---g
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         41413 2 +     78940 g---g
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Orcinus_orca.KB316965.1                                 7228152 2 -   7562323 g---g
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              63928 2 -     66828 G---T
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141881446 2 + 163896628 A---T
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      314907 2 -    505867 g---a
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        4834 2 -     53940 G---T
i Otolemur_crassicaudatus.k141_505435                   I 276 C 0
s Otolemur_garnettii.GL873528.1                          18012808 2 -  38779656 G---T
i Otolemur_garnettii.GL873528.1                         I 279 C 0
s Ovis_aries.CM001582.2                                 134082342 2 - 275406953 g---g
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      83570 2 +    140051 G---G
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127578194 2 - 205426864 a---t
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120155354 2 - 196562556 a---t
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  39624 2 +    295523 g---a
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3643439 2 +  18214204 g---a
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5033087 2 -   6340057 g---a
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1071211 2 -   1292953 g---g
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188160075 1 - 188283584 a----
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              3165 1 +     25005 A----
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47517447 1 +  47705337 A----
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 71438 1 -    104429 A----
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    9970 1 +     14967 A----
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 5835 1 -      7628 A----
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    121115 2 -    135482 g---a
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          10501 2 -     23713 G---C
i Perodicticus_ibeanus.k141_117958                      I 278 C 0
s Perodicticus_potto.k141_1136815                           11641 2 +     61070 G---C
i Perodicticus_potto.k141_1136815                       I 278 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    16924 2 -     36578 G---C
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              2617 2 +      8220 G---G
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           9085 2 +     21690 G---G
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       25794 2 +     44506 A---T
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        26007 2 +     67491 A---T
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      16246 2 -     98129 A---T
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     25846 2 +    147771 A---T
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         2482 2 -     43940 A---T
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          6565 2 -     55515 A---T
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         25919 2 +    152463 A---T
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       3727 2 -    119457 A---T
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         15642 2 +    134592 A---T
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          26229 2 -     75465 A---T
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              190817 2 -    373494 a---t
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19811464 2 +  19899266 A---T
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                3637 2 -      9567 G---C
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6852445 2 +  12164890 g---t
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     21475 2 -     30946 g---t
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         7531 2 +     11805 G---T
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           46879 2 +     52369 G---A
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         39266 2 -     44753 G---T
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            21189 2 +     27322 G---T
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       20823 2 -     53241 G---T
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         43087 2 -     48185 G---T
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        249990 2 -    344369 g---a
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Puma_concolor.QAVW01000427.1                          131539735 2 - 161321710 g---a
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                20194 2 +     68503 G---G
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1792293 2 +   2252614 g---g
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_1069354                      190 2 -       709 G---G
i Saiga_tatarica.SaiTat_scaffold_1069354                C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15676249 2 -  43202129 a---t
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        8163 2 +     34089 A---T
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              8104 2 -     60842 A---T
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              8197 2 +     67014 A---T
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              8175 2 +     60816 A---T
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 8112 2 -     76454 A---T
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17344902 2 -  30362882 A---T
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         24223 2 -     62485 A---T
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   39307 2 -    114521 c---a
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            23260 2 +    739146 G---A
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17769720 1 -  27805282 g----
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2243606 2 +   2842873 t---a
i Spermophilus_dauricus.KZ294190.1                      C 0 I 122
s Spilogale_gracilis.SpiGra_flattened_line_905             238512 2 -    276980 g---a
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            32677 2 +     62062 g---a
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        18491 2 -  13920577 A---T
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      810478 2 +   1148477 G---G
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  61120 2 +     99546 G---G
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               31067 2 +     42269 G---T
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               64376 2 +     65473 G---T
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194011608 1 - 194193292 a----
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   9234 2 +     90398 G---G
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16089521 2 +  31416278 t---t
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2797456 2 -   3938065 a---t
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    9390 2 +     13056 A---T
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69316881 2 -  96451834 g---g
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   9840 2 +     10241 C---A
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6520202 2 +  28682327 g---a
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  9087 2 -     20643 G---T
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             28622 2 -     33872 G---T
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1527914 2 -   2331223 g---g
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                144134 2 -    281493 g---a
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        219580 2 -    227762 g---a
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            1625 2 -     13665 g---t
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Eptesicus_fuscus.JH977687.1                             4708429 237 +   6522550 I
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Dinomys_branickii.DinBra_scaffold_1996                   158442 1030 +    228994 I
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           4051 456 -      6963 I
e Ochotona_princeps.JH802095.1                            4996729 2205 -  23139505 I
e Perognathus_longimembris.PerPac_flattened_line_19359       1614 38 +     49596 I
e Dipodomys_stephensi.DipSte_scaffold_84338                  1789 28 -     11986 I
e Dipodomys_ordii.KN672545.1                              3659429 30 +   4240102 I
e Tonatia_saurophila.TonSau_scaffold_3334                  137563 275 -    259118 I
e Tamandua_tetradactyla.TamTet_scaffold_26877               16259 379 +     45698 I
e Tadarida_brasiliensis.TadBra_scaffold_61492                1822 242 +     20549 I
e Sus_scrofa.CM000824.4                                 189273670 1086 + 218635234 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Pteronotus_parnellii.KE867983.1                            5588 252 -     27784 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             6589 379 -      8794 I
e Myotis_myotis.MyoMyo_scaffold_6123                        13515 236 +     66751 I
e Myotis_lucifugus.GL429887.1                             3468272 238 -   3747815 I
e Myotis_davidii.KB114863.1                               5022194 233 +   6462685 I
e Myotis_brandtii.KE161952.1                               970769 237 +   8389877 I
e Murina_feae.MurFea_scaffold_2254                          23900 236 -    100666 I
e Mormoops_blainvillei.MorMeg_scaffold_2952                162937 259 +    265003 I
e Miniopterus_schreibersii.MinSch_scaffold_24116            36998 214 +     45743 I
e Miniopterus_natalensis.LDJU01000022.1                   8212509 213 +  10048721 I
e Micronycteris_hirsuta.MicHir_scaffold_37978               24387 274 -     32043 I
e Lasiurus_borealis.LasBor_scaffold_59542                    5042 241 +     26176 I
e Elephantulus_edwardii.JH947210.1                        7830035 1277 +  15467074 I
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Echinops_telfairi.JH980316.1                           22999931 2 -  44670279 I
e Desmodus_rotundus.KZ672188.1                           18700517 262 -  18957592 I
e Dasypus_novemcinctus.JH568778.1                          185121 383 -   6883506 I
e Choloepus_hoffmanni.KN194586.1                           763329 503 +    964067 I
e Choloepus_didactylus.ChoDid_scaffold_36182                18024 504 -     21363 I
e Carollia_perspicillata.CarPer_scaffold_4436               61226 261 +     67245 I
e Artibeus_jamaicensis.ArtJam_scaffold_41619                10440 261 -     29036 I
e Anoura_caudifer.AnoCau_scaffold_422                      392020 257 -    631301 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           20903 21 -    119109 I
e Zapus_hudsonius.ZapHud_scaffold_64392                     20221 0 -     20485 C
e Jaculus_jaculus.JH725517.1                              8577091 0 +  11848649 C
e Hylobates_pileatus_a.tarseq_592                             35773 13 -     60944 I
e Allactaga_bullata.AllBul_scaffold_70162                   21407 0 -     22067 C
e Microtus_ochrogaster.CM001673.1                        22823884 0 -  98408828 C
e Xerus_inauris.XerIna_scaffold_7898                       128400 2868 -    134049 I
e Trachypithecus_pileatus.k141_1022309                       5226 0 +     13828 C
e Trachypithecus_phayrei.ctg3                            44662914 0 -  44834318 C
e Trachypithecus_obscurus.k141_1115109                       8130 0 -     28054 C
e Trachypithecus_melamera.k141_699241                        2986 0 -     24393 C
e Trachypithecus_leucocephalus.k141_381681                   3005 0 +     12481 C
e Trachypithecus_laotum.k141_760702                          4719 0 +     14371 C
e Trachypithecus_hatinhensis.k141_504423                     6067 0 -     15592 C
e Trachypithecus_germaini.k141_868450                        3883 0 -     11566 C
e Trachypithecus_geei.k141_670367                           46082 0 -     54611 C
e Trachypithecus_francoisi.k141_768164                       4689 0 -     14244 C
e Trachypithecus_cristatus.k141_1011511                      5261 0 -     12939 C
e Trachypithecus_crepusculus.k141_1588528                   23360 0 -     32910 C
e Trachypithecus_auratus.k141_738098                        29800 0 +     38948 C
e Sigmodon_hispidus.SigHis_scaffold_11332                  104692 0 -    120886 C
e Semnopithecus_vetulus.k141_1143185                        16479 0 +     30600 C
e Semnopithecus_schistaceus.k141_387461                     33457 0 +     42640 C
e Semnopithecus_priam.k141_410937                           40312 0 +     46263 C
e Semnopithecus_johnii.k141_785014                         121532 0 +    130994 C
e Semnopithecus_hypoleucos.k141_761524                      11528 0 +     20762 C
e Semnopithecus_entellus.k141_1572367                        6153 0 +     15331 C
e Rhinopithecus_strykeri.ctg4                            44859307 0 -  45163003 C
e Rhinopithecus_bieti.k119_554384                            2917 0 -     17045 C
e Rattus_norvegicus.chr11                                13917339 0 +  90463843 C
e Pygathrix_nigripes_a.k141_101123                             8537 0 +     18040 C
e Pygathrix_nigripes_b.ctg79                                 6809148 0 +   6970761 C
e Pygathrix_cinerea.k141_374971                             32651 0 +     56732 C
e Psammomys_obesus.NESX01026517.1                           37924 0 +     77221 C
e Presbytis_mitrata.k141_860013                              8661 0 +     14865 C
e Presbytis_comata.k141_672698                               8546 0 -     15069 C
e Pithecia_vanzolinii.k141_831006                           15424 0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514 0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521 0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292 0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093 0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038 0 +     78826 C
e Pithecia_albicans.k141_991845                             45662 0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000036.1               26743271 0 +  26888534 C
e Piliocolobus_kirkii.k141_929665                            4788 0 +      7694 C
e Piliocolobus_gordonorum.k141_1270531                       5421 0 -     17985 C
e Piliocolobus_badius.k141_1987485                           4802 0 -      5908 C
e Peromyscus_maniculatus.KI615518.1                       4955128 0 -   8017169 C
e Onychomys_torridus.OnyTor_scaffold_12578                  42759 0 +     62360 C
e Ondatra_zibethicus.OndZib_scaffold_6821                  130074 0 +    145789 C
e Octodon_degus.JH651621.1                                3687420 1881 +  10294119 I
e Nasalis_larvatus.k141_153429                              11264 0 +     48152 C
e Nannospalax_galili.KL201303.1                            119870 0 +    362372 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     91920 1922 -    117718 I
e Mus_spretus.CM004110.1                                 74336280 0 +  97876770 C
e Mus_pahari.LT608305.1                                  67559930 0 +  89017189 C
e Mus_musculus.chr16                                     75493553 0 +  98207768 C
e Mus_caroli.LT608236.1                                  70771500 0 +  92629107 C
e Mesocricetus_auratus.KB708139.1                         1051195 0 -  26018355 C
e Meriones_unguiculatus.MerUng_scaffold_52233               15573 0 +     15977 C
e Hystrix_cristata.HysCri_scaffold_50788                     7688 1865 +     22540 I
e Graphiurus_murinus.GraMur_scaffold_4493                   79389 0 +    118900 C
e Ellobius_talpinus.LOJH01198462.1                           1216 0 -      1901 C
e Ellobius_lutescens.LOEQ01003611.1                        243474 0 -    369425 C
e Dolichotis_patagonum.DolPat_scaffold_14102                39606 21 -     73477 I
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 32592 1717 -     67205 I
e Cricetulus_griseus.LT883672.1                          53034670 0 +  72327488 C
e Cricetomys_gambianus.CriGam_scaffold_949                 282300 0 -    399297 C
e Colobus_polykomos.k141_1406057                            19335 0 +     23629 C
e Colobus_guereza.LG08                                  147667351 0 + 156195979 C
e Colobus_angolensis.KN985967.1                          10889423 0 +  10971483 C
e Chinchilla_lanigera.JH721867.1                         15963245 964 +  43084221 I
e Cavia_tschudii.CavTsc_scaffold_488                       177725 1742 +    436027 I
e Cavia_porcellus.DS562889.1                             15799553 1742 -  24440124 I
e Cavia_aperea.AVPZ01000278.1                            15787615 1741 -  24422027 I
e Acomys_cahirinus.AcoCah_scaffold_1625                    117436 0 -    189883 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               17223 1 +    209709 T
s Acinonyx_jubatus.LLWD01000356.1                         2039216 1 +   3721120 a
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    117436 1 -    189883 G
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10662906 1 +  23371972 a
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7099687 1 -  16596857 a
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   21407 1 -     22067 G
i Allactaga_bullata.AllBul_scaffold_70162               C 0 I 1
s Allenopithecus_nigroviridis.k141_2469532                   5085 1 -     60446 T
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         5802 1 -     29318 T
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         4740 1 +     38766 T
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          5696 1 -     80423 T
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                               695 1 +     19852 T
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                2951 1 -     12443 T
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                              250 1 +      5070 T
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_macconnelli.k141_2318944                          2734 1 -     24210 T
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           29316 1 -     30219 T
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_405616                              5152 1 +     16794 T
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                             284 1 -      1470 T
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             4429 1 -      9835 T
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3525204 1 +   4113121 a
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             2635 1 +     55446 A
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 66041 1 +     78111 T
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            8987 1 +     22701 T
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5752945 1 +   9889416 t
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             9543 1 -    104377 T
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               9550 1 +     23246 T
i Aotus_vociferans.k141_718647                          C 0 C 0
s Arctocebus_calabarensis.k141_587554                        6132 1 +      9265 T
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9542837 1 +  39197703 T
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             64110 1 +     85812 T
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                15123 1 +     89302 T
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             19624 1 -     58268 T
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             67618 1 +    119057 T
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               9587 1 -     25888 T
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                10627 1 -     16375 T
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               4243 1 +      6337 T
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26383668 1 +  51448160 a
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        8841 1 -     13118 a
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   47666 1 -     72089 A
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   301810 1 -   6870073 a
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22955908 1 + 161108492 a
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     418173 1 +    998990 a
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22664562 1 + 158972876 a
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               674325 1 +   1914593 a
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               117490 1 -    171031 T
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 16510 1 +    125063 T
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                18557 1 -    216513 T
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       11100 1 -    134917 T
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3222806 1 -   8989139 a
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           400508 1 -  15254737 a
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2976244 1 +   6889770 a
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11526056 1 +  39901454 a
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   21030 1 +     87036 a
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11272739 1 -  35597290 a
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11095450 1 +  39895921 a
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16462235 1 -  44759192 a
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21330284 1 + 157394656 a
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135711501 1 - 157403528 a
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          313212 1 +    345090 t
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   162362 1 -    276539 A
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_unicolor.k141_239009                                16109 1 +     25043 T
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                        12216 1 +     21754 T
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4367242 1 +   7569818 a
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         6999 1 -      9338 A
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6559026 1 +   6739814 t
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      30503 1 +     60454 T
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          5707 1 -     21101 T
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         63017 1 -    107033 T
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        5878 1 -     17608 T
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          3043 1 +     45019 T
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           3105 1 +     15177 T
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          5927 1 +     16677 T
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           28115 1 +     35983 T
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11994646 1 +  12117833 T
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46481407 1 +  46592721 T
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      44958 1 -     45581 T
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       5939 1 +     35577 T
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        5733 1 -     25661 T
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        5691 1 -     17744 T
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        25276 1 +     37128 T
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           62855 1 -     68416 T
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                           11956 1 +     13308 T
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             9147 1 -     18223 T
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                               886 1 +    188999 T
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           45185 1 +     57117 T
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          49864 1 +     54541 T
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chiropotes_israelita.k141_1189915                         74669 1 +    196370 T
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          18850 1 +     40510 T
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15143460 1 -  15256731 T
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      37924 1 -     53260 T
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101148483 1 + 101219884 t
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_629495              1894 1 -      3120 T
i Chrysochloris_asiatica.ChrAsi_scaffold_629495         C 0 C 0
s Condylura_cristata.JH655880.1                          60621869 1 +  78930452 a
i Condylura_cristata.JH655880.1                         C 0 I 8
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         1419 1 -      5782 A
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 282300 1 -    399297 G
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53034670 1 +  72327488 G
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            57199 1 -     70449 a
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                20451 1 +     26546 a
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 I 36
s Dasyprocta_punctata.DasPun_flattened_line_634             61589 1 -    236241 a
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 I 36
s Daubentonia_madagascariensis.ctg11                     16848783 1 +  31942871 T
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80040294 1 -  96802777 a
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 325891 1 +    993696 a
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   6531 1 +    151128 A
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1495882 1 +   1727528 a
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        243474 1 -    369425 G
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01198462.1                           1216 1 -      1901 G
i Ellobius_talpinus.LOJH01198462.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85877141 1 +  99434291 a
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Equus_asinus.JREZ01000062.1                             5856257 1 -   7175178 a
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13354757 1 +  41866177 a
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          16247 1 +     92910 a
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11540720 1 +  16010500 a
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48780494 1 -  48907691 T
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          318511 1 +    330699 A
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             64968 1 +     89355 A
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              8937 1 +     13586 T
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_1015201                              2200 1 -      4292 T
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            15333 1 +     36558 T
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            11658 1 +     60246 T
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                15141 1 +    109717 T
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 3126 1 -     19505 T
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                19798 1 +     27497 T
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           22254 1 +     26808 T
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                36989 1 +     46535 T
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              19728 1 -     29447 T
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129898635 1 - 159252932 a
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129285603 1 - 158578461 a
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 26698 1 +     52776 a
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13895737 1 -  19261668 g
i Fukomys_damarensis.KN123630.1                         C 0 I 35
s Galago_moholi.ctg555                                     214975 1 -    847004 T
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           17337 1 -     43889 T
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          14480 1 +     27357 T
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               159234 1 +    324696 T
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    185680 1 -    189561 a
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           15998 1 -     18683 g
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               8938 1 -     14630 T
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119656038 1 - 195582420 t
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   79389 1 +    118900 g
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         5721 1 +     10286 T
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             4199 1 -     11661 T
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             9526 1 +     56096 T
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        32775 1 -     42470 T
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        49401 1 -     54384 T
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              22340 1 +     53719 a
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                32554 1 -     91191 A
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2560257 1 +  31725842 a
i Heterocephalus_glaber.JH602058.1                      C 0 I 35
s Heterohyrax_brucei.HetBruBak_scaffold_25354               62533 1 +     73687 T
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              150292 1 +    277961 A
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      282690 1 -    477199 a
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959                459 1 +     26078 A
i Hipposideros_galeritus.HipGal_scaffold_52959          C 0 C 0
s Hoolock_leuconedys.ctg315                                   349923 1 +    431944 T
i Hoolock_leuconedys.ctg315                                C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 22940 1 -     67322 a
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hylobates_abbotti.k141_1816750                             1400 1 +      3202 T
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1633646                              1370 1 -      2102 T
i Hylobates_agilis.k141_1633646                         C 0 C 0
s Hylobates_klossii.k141_468230                              2887 1 +      5464 T
i Hylobates_klossii.k141_468230                         I 1 C 0
s Hylobates_pileatus_b.ContigUN                                 14628235 1 -  25970782 T
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                             786 1 +      4161 T
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7129849 1 +  13083262 A
i Ictidomys_tridecemlineatus.JH393315.1                 I 116 C 0
s Indri_indri.k141_2197838                                   1200 1 +      3484 T
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              12506 1 +     17520 A
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8577091 1 +  11848649 g
i Jaculus_jaculus.JH725517.1                            C 0 I 1
s Kogia_breviceps.KogBre_flattened_line_35920               27087 1 +     37189 T
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          53706 1 -    147782 T
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lemur_catta.scaffold_1                                258411073 1 - 285822530 T
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        28376 1 +     39228 T
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            57740 1 +     63517 T
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        36120 1 -     38897 T
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      2166 1 -     13103 T
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3091133 1 -   3498232 a
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    18429 1 +     22452 a
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            139458 1 +   3060487 a
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19252114 1 +  19376315 T
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           14916 1 +     84689 T
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3782655 1 +   6799190 T
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20598439 1 -  62548349 t
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11094906 1 +  39895028 a
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             23865 1 +     74745 T
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12710326 1 +  12821369 T
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                2900 1 -     26467 T
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           50771 1 +     63263 T
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 2881 1 -     26361 T
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 6071 1 -      7381 T
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  49300 1 -     79256 T
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196039398 1 + 196197964 t
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11449568 1 +  11645122 t
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   8254 1 -     46448 T
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                5916 1 -     13212 T
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 19597 1 -     55006 T
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43844712 1 +  43892939 T
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               20880 1 -     24607 T
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               8251 1 -     27140 T
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43441287 1 -  43563597 T
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4454091 1 -   4543643 T
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            149311 1 +    252755 a
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             39459 1 +     58827 a
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36877714 1 +  64221397 a
i Marmota_marmota.CZRN01000005.1                        I 121 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       65106 1 -    234502 C
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             6028 1 -     87323 a
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               15573 1 +     15977 G
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1051195 1 -  26018355 G
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    2092 1 -     12939 A
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16514136 1 +  47401472 t
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  41160 1 -     48017 T
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22823884 1 -  98408828 G
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         5833 1 +     29742 T
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        16629 1 -    104932 a
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     4818 1 -     12809 T
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 149887 1 +    154973 A
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  5900 1 -     19904 A
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  150021 1 -    168139 a
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Mus_caroli.LT608236.1                                  70771500 1 +  92629107 G
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75493553 1 +  98207768 G
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67559930 1 +  89017189 G
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74336280 1 +  97876770 G
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             14530 1 +     98495 g
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4427871 1 -  28371801 a
i Mustela_putorius.JH417978.1                           C 0 C 0
s Nannospalax_galili.KL201303.1                            119870 1 +    362372 g
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4490028 1 -  14209539 g
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3954478 1 -   4490290 a
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Nomascus_annamensis.k141_1817463                            526 1 -      1070 T
i Nomascus_annamensis.k141_1817463                      C 0 C 0
s Nomascus_concolor.k141_70405                                526 1 +      1153 T
i Nomascus_concolor.k141_70405                          C 0 I 7
s Nomascus_gabriellae.k141_1400361                            461 1 -      2203 T
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_1022                             480 1 -     11638 T
i Nomascus_siki_b.tarseq_1022                       C 0 C 0
s Nomascus_siki_a.k141_421408                                   371 1 +     16235 T
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                37770 1 +   3668941 a
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65571486 1 -  95554990 T
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_771591                            14895 1 +     16181 T
i Nycticebus_coucang.k141_771591                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65679696 1 +  89412551 T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Odobenus_rosmarus.KB229369.1                             684730 1 -   3126709 a
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1083332 1 +   1425656 a
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         41415 1 +     78940 a
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  130074 1 +    145789 G
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  42759 1 +     62360 G
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7228154 1 -   7562323 a
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              63930 1 -     66828 T
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141881448 1 + 163896628 T
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      314909 1 -    505867 a
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        4836 1 -     53940 T
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18012810 1 -  38779656 T
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134082344 1 - 275406953 a
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      83572 1 +    140051 A
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127578196 1 - 205426864 t
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120155356 1 - 196562556 t
i Pan_troglodytes.CM009241.2                            C 0 I 10
s Panthera_onca.PanOnc_flattened_line_1615                  39626 1 +    295523 a
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3643441 1 +  18214204 a
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5033089 1 -   6340057 a
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1071213 1 -   1292953 a
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188160076 1 - 188283584 t
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              3166 1 +     25005 T
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47517448 1 +  47705337 T
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 71439 1 -    104429 T
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    9971 1 +     14967 T
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 5836 1 -      7628 T
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    121117 1 -    135482 a
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          10503 1 -     23713 T
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           11643 1 +     61070 T
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4955128 1 -   8017169 G
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    16926 1 -     36578 A
i Petromus_typicus.PetTyp_scaffold_33007                C 0 I 33
s Phocoena_phocoena.PhoPho_flattened_line_53071              2619 1 +      8220 A
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           9087 1 +     21690 A
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       25796 1 +     44506 T
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        26009 1 +     67491 T
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      16248 1 -     98129 T
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     25848 1 +    147771 T
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         2484 1 -     43940 T
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          6567 1 -     55515 T
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         25921 1 +    152463 T
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       3729 1 -    119457 T
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         15644 1 +    134592 T
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          26231 1 -     75465 T
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              190819 1 -    373494 t
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19811466 1 +  19899266 T
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                3639 1 -      9567 T
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6852447 1 +  12164890 t
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     21477 1 -     30946 t
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         7533 1 +     11805 T
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           46881 1 +     52369 T
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         39268 1 -     44753 T
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            21191 1 +     27322 T
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       20825 1 -     53241 T
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         43089 1 -     48185 T
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           37924 1 +     77221 G
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        249992 1 -    344369 a
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Puma_concolor.QAVW01000427.1                          131539737 1 - 161321710 a
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                20196 1 +     68503 A
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13917339 1 +  90463843 G
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1792295 1 +   2252614 a
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_1069354                      192 1 -       709 A
i Saiga_tatarica.SaiTat_scaffold_1069354                C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15676251 1 -  43202129 t
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        8165 1 +     34089 T
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              8106 1 -     60842 T
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              8199 1 +     67014 T
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              8177 1 +     60816 T
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 8114 1 -     76454 T
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17344904 1 -  30362882 T
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         24225 1 -     62485 T
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   39309 1 -    114521 a
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  104692 1 -    120886 G
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            23262 1 +    739146 A
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2243730 1 +   2842873 A
i Spermophilus_dauricus.KZ294190.1                      I 122 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             238514 1 -    276980 a
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            32679 1 +     62062 a
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        18493 1 -  13920577 T
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      810480 1 +   1148477 G
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  61122 1 +     99546 G
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               31069 1 +     42269 T
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               64378 1 +     65473 T
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194011609 1 - 194193292 t
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   9236 1 +     90398 A
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16089523 1 +  31416278 t
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2797458 1 -   3938065 t
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    9392 1 +     13056 T
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69316883 1 -  96451834 a
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   9842 1 +     10241 A
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6520204 1 +  28682327 a
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  9089 1 -     20643 T
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             28624 1 -     33872 T
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1527916 1 -   2331223 a
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                144136 1 -    281493 a
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        219582 1 -    227762 a
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     20221 1 -     20485 G
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 I 1
s Ziphius_cavirostris.ZipCav_flattened_line_60625            1627 1 -     13665 a
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Eptesicus_fuscus.JH977687.1                             4708429 237 +   6522550 I
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Sorex_araneus.JH798170.1                               17769721 0 -  27805282 C
e Dinomys_branickii.DinBra_scaffold_1996                   158442 1030 +    228994 I
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           4051 456 -      6963 I
e Ochotona_princeps.JH802095.1                            4996729 2205 -  23139505 I
e Perognathus_longimembris.PerPac_flattened_line_19359       1614 38 +     49596 I
e Dipodomys_stephensi.DipSte_scaffold_84338                  1789 28 -     11986 I
e Dipodomys_ordii.KN672545.1                              3659429 30 +   4240102 I
e Tonatia_saurophila.TonSau_scaffold_3334                  137563 275 -    259118 I
e Tamandua_tetradactyla.TamTet_scaffold_26877               16259 379 +     45698 I
e Tadarida_brasiliensis.TadBra_scaffold_61492                1822 242 +     20549 I
e Sus_scrofa.CM000824.4                                 189273670 1086 + 218635234 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Pteronotus_parnellii.KE867983.1                            5588 252 -     27784 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             6589 379 -      8794 I
e Myotis_myotis.MyoMyo_scaffold_6123                        13515 236 +     66751 I
e Myotis_lucifugus.GL429887.1                             3468272 238 -   3747815 I
e Myotis_davidii.KB114863.1                               5022194 233 +   6462685 I
e Myotis_brandtii.KE161952.1                               970769 237 +   8389877 I
e Murina_feae.MurFea_scaffold_2254                          23900 236 -    100666 I
e Mormoops_blainvillei.MorMeg_scaffold_2952                162937 259 +    265003 I
e Miniopterus_schreibersii.MinSch_scaffold_24116            36998 214 +     45743 I
e Miniopterus_natalensis.LDJU01000022.1                   8212509 213 +  10048721 I
e Micronycteris_hirsuta.MicHir_scaffold_37978               24387 274 -     32043 I
e Lasiurus_borealis.LasBor_scaffold_59542                    5042 241 +     26176 I
e Elephantulus_edwardii.JH947210.1                        7830035 1277 +  15467074 I
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Echinops_telfairi.JH980316.1                           22999931 2 -  44670279 I
e Desmodus_rotundus.KZ672188.1                           18700517 262 -  18957592 I
e Dasypus_novemcinctus.JH568778.1                          185121 383 -   6883506 I
e Crocidura_indochinensis.CroInd_scaffold_27484              1302 0 -     22648 C
e Choloepus_hoffmanni.KN194586.1                           763329 503 +    964067 I
e Choloepus_didactylus.ChoDid_scaffold_36182                18024 504 -     21363 I
e Carollia_perspicillata.CarPer_scaffold_4436               61226 261 +     67245 I
e Artibeus_jamaicensis.ArtJam_scaffold_41619                10440 261 -     29036 I
e Anoura_caudifer.AnoCau_scaffold_422                      392020 257 -    631301 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           20903 21 -    119109 I
e Hylobates_pileatus_a.tarseq_592                             35773 13 -     60944 I
e Xerus_inauris.XerIna_scaffold_7898                       128400 2868 -    134049 I
e Trachypithecus_pileatus.k141_1022309                       5226 0 +     13828 C
e Trachypithecus_phayrei.ctg3                            44662914 0 -  44834318 C
e Trachypithecus_obscurus.k141_1115109                       8130 0 -     28054 C
e Trachypithecus_melamera.k141_699241                        2986 0 -     24393 C
e Trachypithecus_leucocephalus.k141_381681                   3005 0 +     12481 C
e Trachypithecus_laotum.k141_760702                          4719 0 +     14371 C
e Trachypithecus_hatinhensis.k141_504423                     6067 0 -     15592 C
e Trachypithecus_germaini.k141_868450                        3883 0 -     11566 C
e Trachypithecus_geei.k141_670367                           46082 0 -     54611 C
e Trachypithecus_francoisi.k141_768164                       4689 0 -     14244 C
e Trachypithecus_cristatus.k141_1011511                      5261 0 -     12939 C
e Trachypithecus_crepusculus.k141_1588528                   23360 0 -     32910 C
e Trachypithecus_auratus.k141_738098                        29800 0 +     38948 C
e Semnopithecus_vetulus.k141_1143185                        16479 0 +     30600 C
e Semnopithecus_schistaceus.k141_387461                     33457 0 +     42640 C
e Semnopithecus_priam.k141_410937                           40312 0 +     46263 C
e Semnopithecus_johnii.k141_785014                         121532 0 +    130994 C
e Semnopithecus_hypoleucos.k141_761524                      11528 0 +     20762 C
e Semnopithecus_entellus.k141_1572367                        6153 0 +     15331 C
e Rhinopithecus_strykeri.ctg4                            44859307 0 -  45163003 C
e Rhinopithecus_bieti.k119_554384                            2917 0 -     17045 C
e Pygathrix_nigripes_a.k141_101123                             8537 0 +     18040 C
e Pygathrix_nigripes_b.ctg79                                 6809148 0 +   6970761 C
e Pygathrix_cinerea.k141_374971                             32651 0 +     56732 C
e Presbytis_mitrata.k141_860013                              8661 0 +     14865 C
e Presbytis_comata.k141_672698                               8546 0 -     15069 C
e Pithecia_vanzolinii.k141_831006                           15424 0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514 0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521 0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292 0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093 0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038 0 +     78826 C
e Pithecia_albicans.k141_991845                             45662 0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000036.1               26743271 0 +  26888534 C
e Piliocolobus_kirkii.k141_929665                            4788 0 +      7694 C
e Piliocolobus_gordonorum.k141_1270531                       5421 0 -     17985 C
e Piliocolobus_badius.k141_1987485                           4802 0 -      5908 C
e Octodon_degus.JH651621.1                                3687420 1881 +  10294119 I
e Nasalis_larvatus.k141_153429                              11264 0 +     48152 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     91920 1922 -    117718 I
e Hystrix_cristata.HysCri_scaffold_50788                     7688 1865 +     22540 I
e Dolichotis_patagonum.DolPat_scaffold_14102                39606 21 -     73477 I
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 32592 1717 -     67205 I
e Ctenodactylus_gundi.CteGun_scaffold_447                  213669 0 -    956709 C
e Colobus_polykomos.k141_1406057                            19335 0 +     23629 C
e Colobus_guereza.LG08                                  147667351 0 + 156195979 C
e Colobus_angolensis.KN985967.1                          10889423 0 +  10971483 C
e Chinchilla_lanigera.JH721867.1                         15963245 964 +  43084221 I
e Cebus_olivaceus.k141_93739                                11866 0 -     26817 C
e Cebus_albifrons.Contig22                               18894322 0 -  29618158 C
e Cavia_tschudii.CavTsc_scaffold_488                       177725 1742 +    436027 I
e Cavia_porcellus.DS562889.1                             15799553 1742 -  24440124 I
e Cavia_aperea.AVPZ01000278.1                            15787615 1741 -  24422027 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               17224  7 +    209709 TTT---T-------GA-----A
s Acinonyx_jubatus.LLWD01000356.1                         2039217  6 +   3721120 ttt---a-------aa------
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    117437  7 -    189883 TTT---C-------AC-----A
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10662907  6 +  23371972 ttt---a-------aa------
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7099688  6 -  16596857 ttt---a-------aa------
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   21409  7 -     22067 TTT---C-------AA-----A
i Allactaga_bullata.AllBul_scaffold_70162               I 1 C 0
s Allenopithecus_nigroviridis.k141_2469532                   5086  7 -     60446 TTA---A-------AA-----A
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         5803  7 -     29318 TTA---A-------AA-----A
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         4741  7 +     38766 TTA---A-------AA-----A
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          5697  7 -     80423 TTA---A-------AA-----A
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                               696  6 +     19852 TTT---T--------A-----A
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                2952  6 -     12443 TTT---A--------A-----A
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                              251  6 +      5070 TTT---T--------A-----A
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_macconnelli.k141_2318944                          2735  6 -     24210 TTT---A--------A-----A
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           29317  6 -     30219 TTT---T--------A-----A
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_405616                              5153  6 +     16794 TTT---T--------A-----A
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                             285  6 -      1470 TTT---A--------A-----A
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             4430  6 -      9835 TTT---T--------A-----A
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3525205  7 +   4113121 gat---t-------ta-----a
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             2636  7 +     55446 TTT---T-------TA-----A
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 66042  6 +     78111 TTT---T--------A-----A
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            8988  6 +     22701 TTT---T--------A-----A
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5752946  6 +   9889416 ttt---t--------a-----a
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             9544  6 -    104377 TTT---T--------T-----T
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               9551  6 +     23246 TTT---T--------A-----A
i Aotus_vociferans.k141_718647                          C 0 C 0
s Arctocebus_calabarensis.k141_587554                        6133 12 +      9265 TTT---C--CATGGAA-----A
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9542838  6 +  39197703 TTT---A--------A-----A
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             64111  6 +     85812 TTT---A--------A-----A
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                15124  6 +     89302 TTT---A--------A-----A
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             19625  6 -     58268 TTT---A--------A-----A
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             67619  6 +    119057 TTT---A--------A-----A
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               9588  6 -     25888 TTT---A--------A-----A
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                10628  8 -     16375 TTT---T------AAA-----A
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               4244  8 +      6337 TTT---T------AAA-----A
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26383669  8 +  51448160 ttt---t------ttt-----t
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        8842  8 -     13118 ttt---t------ttt-----t
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   47667  7 -     72089 TTT---T-------TA-----A
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   301811  7 -   6870073 ttt---t-------tt-----t
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22955909  7 + 161108492 ttt---t-------tt-----t
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     418174  7 +    998990 ttt---t-------tt-----t
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22664563  7 + 158972876 ttt---t-------tt-----t
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               674326  7 +   1914593 ttt---t-------tt-----t
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               117491  6 -    171031 TTT---T--------A-----A
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 16511  6 +    125063 TTT---T--------A-----A
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                18558  6 -    216513 TTT---T--------T-----A
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       11101  6 -    134917 TTT---T--------A-----A
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3222807  7 -   8989139 ttt---t-------ta-----a
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           400509  7 -  15254737 ttt---t-------ta-----a
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2976245  7 +   6889770 ttt---t-------ta-----a
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11526057  6 +  39901454 ttt---a-------aa------
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   21031  6 +     87036 ttt---a-------aa------
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11272740  6 -  35597290 ttt---a-------aa------
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11095451  6 +  39895921 ttt---a-------aa------
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16462236  6 -  44759192 ttt---a-------aa------
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21330285  7 + 157394656 gat---t-------ta-----a
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135711502  7 - 157403528 gat---t-------ta-----a
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          313213  7 +    345090 ttt---t-------aa-----a
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   162363  7 -    276539 TTT---T-------TA-----A
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18894322  7 -  29618158 ttt--tt--------t-----t
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                11866  7 -     26817 TTTT--T--------T-----T
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                16110  7 +     25043 TTTT--T--------T-----T
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                        12217  7 +     21754 TTT---A-------AA-----A
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4367243  7 +   7569818 ttt---t-------tt-----a
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         7000  7 -      9338 TTT---T-------TT-----A
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6559027  7 +   6739814 tta---a-------aa-----a
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      30504  7 +     60454 TTA---A-------AA-----A
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          5708  7 -     21101 TTA---A-------AA-----A
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         63018  7 -    107033 TTA---A-------AA-----A
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        5879  7 -     17608 TTA---A-------AA-----A
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          3044  7 +     45019 TTA---A-------AA-----A
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           3106  7 +     15177 TTA---A-------AA-----A
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          5928  7 +     16677 TTA---A-------AA-----A
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           28116  7 +     35983 TTA---A-------AA-----A
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11994647  7 +  12117833 TTT---A-------AA-----A
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46481408  7 +  46592721 TTA---A-------AA-----A
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      44959  7 -     45581 TTA---A-------AA-----A
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       5940  7 +     35577 TTA---A-------AA-----A
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        5734  7 -     25661 TTA---A-------AA-----A
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        5692  7 -     17744 TTA---A-------AA-----A
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        25277  7 +     37128 TTA---A-------AA-----A
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           62856  7 -     68416 TTT---A-------AA-----A
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                           11957  7 +     13308 TTT---T-------AA-----A
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             9148  7 -     18223 TTT---A-------AA-----A
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                               887  7 +    188999 TTT---A-------AA-----A
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           45186  7 +     57117 TTT---A-------AA-----A
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          49865  7 +     54541 TTT---A-------AA-----A
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chiropotes_israelita.k141_1189915                         74670  6 +    196370 TTT---T--------A-----A
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          18851  6 +     40510 TTT---T--------A-----A
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15143461  8 -  15256731 TTA--AA-------AA-----A
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      37925  8 -     53260 TTA--AA-------AA-----A
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101148484  8 + 101219884 tta--aa-------aa-----a
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_629495              1895  9 -      3120 TTT-AAA-------AG-----G
i Chrysochloris_asiatica.ChrAsi_scaffold_629495         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         1420  7 -      5782 TGT---A-------TT-----T
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 282301  7 -    399297 TTT---T-------AA-----A
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53034671  7 +  72327488 TTT---C-------AA-----A
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              1302  2 -     22648 ---------------C-----A
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            57200  6 -     70449 ttt---a-------aa------
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  213669  2 -    956709 ---------------A-----A
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                20488  8 +     26546 TTT---A------TTA-----A
i Cuniculus_paca.CunPac_flattened_line_16637            I 36 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             61626  8 -    236241 TTT---A------TTA-----A
i Dasyprocta_punctata.DasPun_flattened_line_634         I 36 C 0
s Daubentonia_madagascariensis.ctg11                     16848784  7 +  31942871 TTT---T-------AA-----A
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80040295  7 -  96802777 ttt---t-------tt-----t
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 325892  6 +    993696 tt----t-------tt-----t
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   6532  7 +    151128 TTT---T-------TT-----A
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dipodomys_ordii.KN672545.1                              3659459  1 +   4240102 ---------------------a
i Dipodomys_ordii.KN672545.1                            I 30 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  1817  1 -     11986 ---------------------A
i Dipodomys_stephensi.DipSte_scaffold_84338             I 28 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1495883  7 +   1727528 ttt---t-------aa-----a
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        243475  7 -    369425 TTG---C-------AA-----A
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01198462.1                           1217  7 -      1901 TTG---C-------AA-----A
i Ellobius_talpinus.LOJH01198462.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85877142  6 +  99434291 ttt---a-------aa------
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Equus_asinus.JREZ01000062.1                             5856258  7 -   7175178 ttt---c-------tt-----a
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13354758  7 +  41866177 ttt---c-------tt-----a
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          16248  7 +     92910 ttt---c-------tt-----a
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11540721  3 +  16010500 ttt-------------------
i Erinaceus_europaeus.JH835290.1                        C 0 I 1
s Erythrocebus_patas.Contig8                             48780495  7 -  48907691 TTA---A-------AA-----A
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          318512  8 +    330699 TTT---T------TTT-----T
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             64969  8 +     89355 TTT---T------TTT-----T
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              8938  7 +     13586 TTT---T-------AA-----A
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_1015201                              2201  7 -      4292 TTT---T-------AA-----A
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            15334  7 +     36558 TTT---T-------AA-----A
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            11659  7 +     60246 TTT---T-------AA-----A
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                15142  7 +    109717 TTT---T-------AA-----A
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 3127  7 -     19505 TTT---T-------AA-----A
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                19799  7 +     27497 TTT---T-------AA-----A
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           22255  7 +     26808 TTT---T-------AA-----A
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                36990  7 +     46535 TTT---T-------AA-----A
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              19729  7 -     29447 TTT---A-------AA-----A
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129898636  6 - 159252932 ttt---a-------aa------
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129285604  6 - 158578461 ttt---a-------aa------
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 26699  6 +     52776 ttt---a-------aa------
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13895773  8 -  19261668 gTT---A------TTA-----A
i Fukomys_damarensis.KN123630.1                         I 35 C 0
s Galago_moholi.ctg555                                     214976 12 -    847004 TCT---C--CGTAGAA-----A
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           17338 12 -     43889 TCT---C--CGTAGAA-----A
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          14481 13 +     27357 TCT---C-TGTAGAAA-----A
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               159235  7 +    324696 TTT---A-------AA-----A
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    185681  7 -    189561 gtt---t-------ta-----a
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           15999  7 -     18683 ttt---c-------ga-----c
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               8939  7 -     14630 TTT---A-------AA-----A
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119656039  7 - 195582420 ttt---a-------aa-----a
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   79390  7 +    118900 ttt---t-------aa-----t
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         5722  7 +     10286 TTT---T-------AA-----A
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             4200  7 -     11661 TTT---T-------AA-----A
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             9527  7 +     56096 TTT---T-------AA-----A
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        32776  7 -     42470 TTT---T-------AA-----A
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        49402  7 -     54384 TTT---T-------AA-----A
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              22341  6 +     53719 ttt---a-------aa------
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                32555  7 -     91191 TAT---T-------TA-----A
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2560293  8 +  31725842 TTT---A------TTA-----A
i Heterocephalus_glaber.JH602058.1                      I 35 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               62534  8 +     73687 T--TTAA-------AA-----A
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              150293  7 +    277961 TTT---T-------TT-----T
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      282691 12 -    477199 att---t-------tttatttt
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959                460 12 +     26078 ATT---T-------TTTATTTT
i Hipposideros_galeritus.HipGal_scaffold_52959          C 0 C 0
s Hoolock_leuconedys.ctg315                                   349924  7 +    431944 TTT---T-------AA-----A
i Hoolock_leuconedys.ctg315                                C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 22941  6 -     67322 ttt---a-------aa------
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hylobates_abbotti.k141_1816750                             1401  7 +      3202 TTT---T-------TT-----A
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1633646                              1371  7 -      2102 TTT---T-------AA-----A
i Hylobates_agilis.k141_1633646                         C 0 C 0
s Hylobates_klossii.k141_468230                              2888  7 +      5464 TTT---T-------AA-----A
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14628236  7 -  25970782 TTT---T-------AA-----A
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                             787  7 +      4161 TTT---T-------AA-----A
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7129850  7 +  13083262 TTG---C-------AA-----T
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   1201  7 +      3484 TTT---T-------AA-----A
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              12507  7 +     17520 TTT---T-------TT-----T
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8577093  7 +  11848649 TTT---C-------AA-----A
i Jaculus_jaculus.JH725517.1                            I 1 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               27088 13 +     37189 TTT---T-TTTTTTTT-----T
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          53707  6 -    147782 TTT---A--------A-----A
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lemur_catta.scaffold_1                                258411074  7 - 285822530 TTT---T-------AA-----A
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        28377  7 +     39228 TTT---C-------AA-----A
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            57741  7 +     63517 TTT---T-------AA-----A
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        36121  7 -     38897 TTT---T-------AA-----A
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      2167  7 -     13103 TTT---T-------AA-----A
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3091134  6 -   3498232 ttt---a-------aa------
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    18430  7 +     22452 tat---c-------aa-----t
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            139459  7 +   3060487 ttt---t-------tt-----t
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19252115  7 +  19376315 TTA---A-------AA-----A
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           14917 12 +     84689 TTT---C--CATGGAA-----A
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3782656 12 +   6799190 TTT---C--CATGGAA-----A
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20598440 17 -  62548349 tttacaaaaaaaaaaa-----a
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11094907  6 +  39895028 ttt---a-------aa------
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             23866  7 +     74745 TTA---A-------AA-----A
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12710327  7 +  12821369 TTA---A-------AA-----A
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                2901  7 -     26467 TTA---A-------AA-----A
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           50772  7 +     63263 TTA---A-------AA-----A
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 2882  7 -     26361 TTA---A-------AA-----A
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 6072  7 -      7381 TTA---A-------AA-----A
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  49301  7 -     79256 TTA---A-------AA-----A
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196039399  7 + 196197964 tta---a-------aa-----a
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11449569  7 +  11645122 tta---a-------aa-----a
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   8255  7 -     46448 TTA---A-------AA-----A
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                5917  7 -     13212 TTA---A-------AA-----A
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 19598  7 -     55006 TTA---A-------AA-----A
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43844713  7 +  43892939 TTA---A-------AA-----A
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               20881  7 -     24607 TTA---A-------AA-----A
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               8252  7 -     27140 TTA---A-------AA-----A
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43441288  7 -  43563597 TTA---A-------AA-----A
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4454092  7 -   4543643 TTA---A-------AA-----A
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            149312  7 +    252755 ttt---g-------ga-----t
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             39460  7 +     58827 ttt---g-------ga-----t
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36877715  7 +  64221397 ttg---c-------aa-----t
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       65107  7 -    234502 TTT---G-------TT-----T
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             6029  6 -     87323 ttt---a-------aa------
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               15574  7 +     15977 TTT---C-------AA-----A
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1051196  7 -  26018355 TTT---C-------AA-----A
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    2093 10 -     12939 TTT---T----TTTTT-----T
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16514137  7 +  47401472 ttt---t-------aa-----a
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  41161  8 -     48017 TT--AAA-------AG-----A
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22823885  7 -  98408828 TTG---C-------TG-----C
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         5834  7 +     29742 TTA---A-------AA-----A
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        16630  6 -    104932 ttt---a-------aa------
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     4819  7 -     12809 TTT---T-------AA-----A
i Mirza_zaza.k141_593947                                C 0 I 1
s Monodon_monoceros.MonMon_M_scaffold_5598                 149888  7 +    154973 TTT---T-------TT-----T
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  5901  7 -     19904 GTT---T-------TA-----A
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  150022  6 -    168139 ttt---a-------aa------
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Mus_caroli.LT608236.1                                  70771501  7 +  92629107 TTT---C-------AA-----A
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75493554  7 +  98207768 TTT---C-------AA-----A
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67559931  7 +  89017189 TTT---C-------AA-----A
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74336281  7 +  97876770 TTT---C-------AA-----A
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             14531 13 +     98495 ttt---ccaagta-aa-----t
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4427872  6 -  28371801 ttt---a-------aa------
i Mustela_putorius.JH417978.1                           C 0 C 0
s Nannospalax_galili.KL201303.1                            119871  7 +    362372 gtt---t-------aa-----a
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4490029  6 -  14209539 ttt---a-------aa------
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3954479  7 -   4490290 ttt---t-------tt-----t
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Nomascus_annamensis.k141_1817463                            527  7 -      1070 TTT---T-------AA-----A
i Nomascus_annamensis.k141_1817463                      C 0 C 0
s Nomascus_concolor.k141_27752                                568  7 +      1113 TTT---T-------AA-----A
i Nomascus_concolor.k141_27752                          n 7 I 312
s Nomascus_gabriellae.k141_1400361                            462  7 -      2203 TTT---T-------AA-----A
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_1022                             481  7 -     11638 TTT---T-------AA-----A
i Nomascus_siki_b.tarseq_1022                       C 0 C 0
s Nomascus_siki_a.k141_421408                                   372  7 +     16235 TTT---T-------AA-----A
i Nomascus_siki_a.k141_421408                             C 0 I 2
s Nyctereutes_procyonoides.CAJHUB010000786.1                37771  6 +   3668941 ttt---a-------aa------
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65571487 11 -  95554990 TTT---C--TATGG-A-----A
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_771591                            14896 11 +     16181 TTT---C--TATGG-A-----A
i Nycticebus_coucang.k141_771591                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65679697 12 +  89412551 TTT---C--TATGGAa-----a
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Odobenus_rosmarus.KB229369.1                             684731  6 -   3126709 ttt---a-------aa------
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1083333  7 +   1425656 ttt---t-------ta-----a
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         41416  7 +     78940 ttt---t-------ta-----a
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  130075  7 +    145789 TTG---C-------AA-----A
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  42760  7 +     62360 TTT---C-------AA-----A
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7228155  7 -   7562323 ttt---t-------tt-----t
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              63931  9 -     66828 TTTT-AA-------AA-----A
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141881449  7 + 163896628 TAT---C-------AA-----t
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      314910  6 -    505867 ttt---a-------aa------
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        4837 12 -     53940 TCT---C--CGTAGAA-----A
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18012811 12 -  38779656 TCt---ccata--gaa-----a
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134082345  7 - 275406953 tat---t-------ta-----a
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      83573  7 +    140051 TAC---T-------TA-----A
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127578197  7 - 205426864 ttt---a-------aa-----g
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.KZ622857.1                               332988  7 +    772158 ttt---a-------aa-----a
i Pan_troglodytes.KZ622857.1                            I 16 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  39627  6 +    295523 ttt---a-------aa------
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3643442  6 +  18214204 ttt---a-------aa------
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5033090  6 -   6340057 ttt---a-------aa------
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1071214  7 -   1292953 tat---t-------ta-----a
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188160077  7 - 188283584 tta---a-------aa-----a
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              3167  7 +     25005 TTA---A-------AA-----A
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47517449  7 +  47705337 TTA---A-------AA-----A
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 71440  7 -    104429 TTA---A-------AA-----A
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    9972  7 +     14967 TTA---A-------AA-----A
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 5837  7 -      7628 TTA---A-------AA-----A
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    121118  6 -    135482 ttt---a-------aa------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          10504 12 -     23713 TTT---C--CATGGAA-----A
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           11644 12 +     61070 TTT---C--CATGTAA-----A
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       1652  1 +     49596 ---------------------A
i Perognathus_longimembris.PerPac_flattened_line_19359  I 38 C 0
s Peromyscus_maniculatus.KI615518.1                       4955129  7 -   8017169 TTT---C-------AA-----A
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    16960  8 -     36578 TTT---A------CTA-----A
i Petromus_typicus.PetTyp_scaffold_33007                I 33 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              2620  7 +      8220 TTT---T-------TT-----T
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           9088 10 +     21690 TTT---T----TTTTT-----T
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       25797  7 +     44506 TTT---T-------AA-----A
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        26010  7 +     67491 TTT---T-------AA-----A
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      16249  7 -     98129 TTT---T-------AA-----A
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     25849  7 +    147771 TTT---T-------TA-----A
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         2485  7 -     43940 TTT---T-------AA-----A
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          6568  7 -     55515 TTT---T-------AA-----A
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         25922  7 +    152463 TTT---T-------TA-----A
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       3730  7 -    119457 TTT---T-------TA-----A
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         15645  7 +    134592 TTT---T-------AA-----A
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          26232  7 -     75465 TTT---T-------TA-----A
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              190820  7 -    373494 ttc---t-------aa-----a
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19811467  7 +  19899266 TTC---T-------AA-----A
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                3640  8 -      9567 T--TTAA-------AA-----A
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6852448  7 +  12164890 ttt---t-------aa-----a
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     21478  7 -     30946 ttt---t-------aa-----a
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         7534  7 +     11805 TTT---T-------AA-----A
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           46882  7 +     52369 TTT---T-------AA-----A
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         39269  7 -     44753 TTT---T-------AA-----A
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            21192  7 +     27322 TTT---T-------AA-----A
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       20826  7 -     53241 TTT---C-------AA-----A
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         43090  7 -     48185 TTT---T-------AA-----A
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           37925  7 +     77221 Ttt---c-------aa-----c
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        249993  6 -    344369 ttt---a-------aa------
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Puma_concolor.QAVW01000427.1                          131539738  6 - 161321710 ttt---a-------aa------
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                20197  7 +     68503 TTT---T-------TA-----A
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13917340  7 +  90463843 TTT---C-------AA-----A
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1792296  7 +   2252614 ttt---t-------tt-----t
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_1069354                      193  7 -       709 TTT---T-------TA-----A
i Saiga_tatarica.SaiTat_scaffold_1069354                C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15676252  7 -  43202129 tta--aa--------a-----a
i Saimiri_boliviensis.NW_024100938.1                    C 0 I 2
s Saimiri_cassiquiarensis.k141_808270                        8166  7 +     34089 TTTT--A--------A-----A
i Saimiri_cassiquiarensis.k141_808270                   C 0 I 2
s Saimiri_macrodon.k141_2087127                              8107  3 -     60842 TTT-------------------
i Saimiri_macrodon.k141_2087127                         C 0 I 5
s Saimiri_oerstedii.k141_841116                              8200  7 +     67014 TTTT--A--------A-----A
i Saimiri_oerstedii.k141_841116                         C 0 I 2
s Saimiri_sciureus.k141_1947592                              8178  6 +     60816 TTA---A--------A-----A
i Saimiri_sciureus.k141_1947592                         C 0 I 2
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   39310  3 -    114521 ------a-------a------a
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 I 19
s Saimiri_ustus.k141_1282476                                 8115  3 -     76454 TTT-------------------
i Saimiri_ustus.k141_1282476                            C 0 I 5
s Sapajus_apella.ctg10                                   17344905  3 -  30362882 TTT-------------------
i Sapajus_apella.ctg10                                  C 0 I 2
s Sapajus_macrocephalus.k141_966464                         24226  3 -     62485 TTT-------------------
i Sapajus_macrocephalus.k141_966464                     C 0 I 2
s Sigmodon_hispidus.SigHis_scaffold_11332                  104693  7 -    120886 TTT---C-------AA-----A
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            23263  7 +    739146 TTT---A-------AC-----A
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17769721  2 -  27805282 ---------------a-----a
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2243731  7 +   2842873 TTG---C-------AA-----T
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             238515  6 -    276980 ttt---a-------aa------
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            32680  6 +     62062 ttt---a-------aa------
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        18494  7 -  13920577 TTT---T-------AA-----A
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      810481  7 +   1148477 TTC---T-------TT-----T
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  61123  7 +     99546 TTT---T-------TT-----T
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               31070  7 +     42269 TTT---T-------AA-----A
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               64379  7 +     65473 TTT---T-------AA-----A
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194011610  7 - 194193292 tta---a-------aa-----a
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   9237  4 +     90398 TTT---T---------------
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16089524 10 +  31416278 tttttaa-------aa-----a
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2797459  7 -   3938065 ttt---c-------aa-----a
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    9393  7 +     13056 TTT---C-------AA-----A
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69316884  7 -  96451834 ttt---t-------tt-----t
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   9843  6 +     10241 TTT---A-------A------A
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 I 19
s Ursus_maritimus.KK498671.1                              6520205  6 +  28682327 ttt---a-------aa------
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  9090  7 -     20643 TTT---T-------AA-----A
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             28625  7 -     33872 TTT---T-------AA-----A
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1527917  7 -   2331223 ttt---t-------ta-----a
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                144137  6 -    281493 ttt---a-------aa------
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        219583  6 -    227762 ttt---a-------aa------
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     20223  7 -     20485 TTT---A-------AA-----A
i Zapus_hudsonius.ZapHud_scaffold_64392                 I 1 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            1628  8 -     13665 ttt---t------ttt-----t
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Eptesicus_fuscus.JH977687.1                             4708429 237 +   6522550 I
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Dinomys_branickii.DinBra_scaffold_1996                   158442 1030 +    228994 I
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           4051 456 -      6963 I
e Ochotona_princeps.JH802095.1                            4996729 2205 -  23139505 I
e Tonatia_saurophila.TonSau_scaffold_3334                  137563 275 -    259118 I
e Tamandua_tetradactyla.TamTet_scaffold_26877               16259 379 +     45698 I
e Tadarida_brasiliensis.TadBra_scaffold_61492                1822 242 +     20549 I
e Sus_scrofa.CM000824.4                                 189273670 1086 + 218635234 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Pteronotus_parnellii.KE867983.1                            5588 252 -     27784 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             6589 379 -      8794 I
e Myotis_myotis.MyoMyo_scaffold_6123                        13515 236 +     66751 I
e Myotis_lucifugus.GL429887.1                             3468272 238 -   3747815 I
e Myotis_davidii.KB114863.1                               5022194 233 +   6462685 I
e Myotis_brandtii.KE161952.1                               970769 237 +   8389877 I
e Murina_feae.MurFea_scaffold_2254                          23900 236 -    100666 I
e Mormoops_blainvillei.MorMeg_scaffold_2952                162937 259 +    265003 I
e Miniopterus_schreibersii.MinSch_scaffold_24116            36998 214 +     45743 I
e Miniopterus_natalensis.LDJU01000022.1                   8212509 213 +  10048721 I
e Micronycteris_hirsuta.MicHir_scaffold_37978               24387 274 -     32043 I
e Lasiurus_borealis.LasBor_scaffold_59542                    5042 241 +     26176 I
e Elephantulus_edwardii.JH947210.1                        7830035 1277 +  15467074 I
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Echinops_telfairi.JH980316.1                           22999931  2 -  44670279 I
e Desmodus_rotundus.KZ672188.1                           18700517 262 -  18957592 I
e Dasypus_novemcinctus.JH568778.1                          185121 383 -   6883506 I
e Condylura_cristata.JH655880.1                          60621870  8 +  78930452 I
e Choloepus_hoffmanni.KN194586.1                           763329 503 +    964067 I
e Choloepus_didactylus.ChoDid_scaffold_36182                18024 504 -     21363 I
e Carollia_perspicillata.CarPer_scaffold_4436               61226 261 +     67245 I
e Artibeus_jamaicensis.ArtJam_scaffold_41619                10440 261 -     29036 I
e Anoura_caudifer.AnoCau_scaffold_422                      392020 257 -    631301 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           20903 21 -    119109 I
e Hylobates_pileatus_a.tarseq_592                             35773 13 -     60944 I
e Xerus_inauris.XerIna_scaffold_7898                       128400 2868 -    134049 I
e Trachypithecus_pileatus.k141_1022309                       5226  0 +     13828 C
e Trachypithecus_phayrei.ctg3                            44662914  0 -  44834318 C
e Trachypithecus_obscurus.k141_1115109                       8130  0 -     28054 C
e Trachypithecus_melamera.k141_699241                        2986  0 -     24393 C
e Trachypithecus_leucocephalus.k141_381681                   3005  0 +     12481 C
e Trachypithecus_laotum.k141_760702                          4719  0 +     14371 C
e Trachypithecus_hatinhensis.k141_504423                     6067  0 -     15592 C
e Trachypithecus_germaini.k141_868450                        3883  0 -     11566 C
e Trachypithecus_geei.k141_670367                           46082  0 -     54611 C
e Trachypithecus_francoisi.k141_768164                       4689  0 -     14244 C
e Trachypithecus_cristatus.k141_1011511                      5261  0 -     12939 C
e Trachypithecus_crepusculus.k141_1588528                   23360  0 -     32910 C
e Trachypithecus_auratus.k141_738098                        29800  0 +     38948 C
e Semnopithecus_vetulus.k141_1143185                        16479  0 +     30600 C
e Semnopithecus_schistaceus.k141_387461                     33457  0 +     42640 C
e Semnopithecus_priam.k141_410937                           40312  0 +     46263 C
e Semnopithecus_johnii.k141_785014                         121532  0 +    130994 C
e Semnopithecus_hypoleucos.k141_761524                      11528  0 +     20762 C
e Semnopithecus_entellus.k141_1572367                        6153  0 +     15331 C
e Rhinopithecus_strykeri.ctg4                            44859307  0 -  45163003 C
e Rhinopithecus_bieti.k119_554384                            2917  0 -     17045 C
e Pygathrix_nigripes_a.k141_101123                             8537  0 +     18040 C
e Pygathrix_nigripes_b.ctg79                                 6809148  0 +   6970761 C
e Pygathrix_cinerea.k141_374971                             32651  0 +     56732 C
e Presbytis_mitrata.k141_860013                              8661  0 +     14865 C
e Presbytis_comata.k141_672698                               8546  0 -     15069 C
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000036.1               26743271  0 +  26888534 C
e Piliocolobus_kirkii.k141_929665                            4788  0 +      7694 C
e Piliocolobus_gordonorum.k141_1270531                       5421  0 -     17985 C
e Piliocolobus_badius.k141_1987485                           4802  0 -      5908 C
e Octodon_degus.JH651621.1                                3687420 1881 +  10294119 I
e Nasalis_larvatus.k141_153429                              11264  0 +     48152 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     91920 1922 -    117718 I
e Hystrix_cristata.HysCri_scaffold_50788                     7688 1865 +     22540 I
e Dolichotis_patagonum.DolPat_scaffold_14102                39606 21 -     73477 I
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 32592 1717 -     67205 I
e Colobus_polykomos.k141_1406057                            19335  0 +     23629 C
e Colobus_guereza.LG08                                  147667351  0 + 156195979 C
e Colobus_angolensis.KN985967.1                          10889423  0 +  10971483 C
e Chinchilla_lanigera.JH721867.1                         15963245 964 +  43084221 I
e Cavia_tschudii.CavTsc_scaffold_488                       177725 1742 +    436027 I
e Cavia_porcellus.DS562889.1                             15799553 1742 -  24440124 I
e Cavia_aperea.AVPZ01000278.1                            15787615 1741 -  24422027 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               17231 3 +    209709 AA-A
s Allenopithecus_nigroviridis.k141_2469532                   5093 3 -     60446 AC-A
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         5810 3 -     29318 AC-A
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         4748 3 +     38766 AC-A
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          5704 3 -     80423 AC-A
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                               702 3 +     19852 AA-A
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                2958 3 -     12443 AA-A
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                              257 3 +      5070 AA-A
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_macconnelli.k141_2318944                          2741 3 -     24210 AA-A
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           29323 3 -     30219 AA-A
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_405616                              5159 3 +     16794 AA-A
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                             291 3 -      1470 AA-A
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             4436 3 -      9835 AA-A
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Aotus_azarae.k141_3170768                                 66048 3 +     78111 AA-A
i Aotus_azarae.k141_3170768                             C 0 I 1
s Aotus_griseimembra.k141_3275623                            8994 3 +     22701 AA-A
i Aotus_griseimembra.k141_3275623                       C 0 I 1
s Aotus_nancymaae.KZ196176.1                              5752952 3 +   9889416 aa-a
i Aotus_nancymaae.KZ196176.1                            C 0 I 1
s Aotus_trivirgatus.k141_1740727                             9550 3 -    104377 TA-A
i Aotus_trivirgatus.k141_1740727                        C 0 I 1
s Aotus_vociferans.k141_718647                               9557 3 +     23246 AA-A
i Aotus_vociferans.k141_718647                          C 0 I 1
s Arctocebus_calabarensis.k141_587554                        6145 3 +      9265 AA-A
i Arctocebus_calabarensis.k141_587554                   C 0 I 1
s Ateles_geoffroyi_b.tarseq_2582                             9542844 3 +  39197703 AA-A
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             64117 3 +     85812 AA-A
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                15130 3 +     89302 AA-A
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             19631 3 -     58268 AA-A
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             67625 3 +    119057 AA-A
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               9594 3 -     25888 AA-A
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Cacajao_ayresi.k141_724503                               117497 3 -    171031 AA-A
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 16517 3 +    125063 AA-A
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                18564 3 -    216513 AA-A
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       11107 3 -    134917 AA-A
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Carlito_syrichta.NW_007248099.1                          313220 1 +    345090 a---
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Cebus_albifrons.Contig22                               18894329 3 -  29618158 ta-a
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                11873 3 -     26817 AA-A
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                16117 3 +     25043 AA-A
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                        12224 1 +     21754 A---
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6559034 3 +   6739814 ac-a
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      30511 3 +     60454 AC-A
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          5715 3 -     21101 AC-A
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         63025 3 -    107033 AC-A
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        5886 3 -     17608 AC-A
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          3051 3 +     45019 AC-A
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           3113 3 +     15177 AC-A
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          5935 3 +     16677 AC-A
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           28123 3 +     35983 AC-A
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11994654 3 +  12117833 AC-A
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46481415 3 +  46592721 AC-A
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      44966 3 -     45581 AC-A
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       5947 3 +     35577 AC-A
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        5741 3 -     25661 AC-A
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        5699 3 -     17744 AC-A
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        25284 3 +     37128 AC-A
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Cheracebus_lucifer.k141_619653                             9155 3 -     18223 AA-A
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                               894 3 +    188999 AA-A
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           45193 3 +     57117 AA-A
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          49872 3 +     54541 AA-A
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chiropotes_israelita.k141_1189915                         74676 3 +    196370 AA-A
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          18857 3 +     40510 AA-A
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15143469 3 -  15256731 AC-A
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      37933 3 -     53260 AC-A
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101148492 3 + 101219884 ac-a
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Erythrocebus_patas.Contig8                             48780502 3 -  48907691 AC-A
i Erythrocebus_patas.Contig8                            C 0 C 0
s Galago_moholi.ctg555                                     214988 3 -    847004 AA-A
i Galago_moholi.ctg555                                  C 0 I 1
s Galago_senegalensis.k141_964197                           17350 3 -     43889 AA-A
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          14494 3 +     27357 AA-A
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Gorilla_beringei.k141_111300                               8946 3 -     14630 AC-A
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119656046 3 - 195582420 ac-a
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Hoolock_leuconedys.ctg315                                   349931 3 +    431944 AA-A
i Hoolock_leuconedys.ctg315                                C 0 C 0
s Hylobates_abbotti.k141_1816750                             1408 3 +      3202 AA-A
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1633646                              1378 3 -      2102 AA-A
i Hylobates_agilis.k141_1633646                         C 0 C 0
s Hylobates_klossii.k141_468230                              2895 3 +      5464 AA-A
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14628243 3 -  25970782 AA-A
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                             794 3 +      4161 AA-A
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Lagothrix_lagothricha.k141_12968                          53713 3 -    147782 AA-A
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lophocebus_aterrimus.ctg55                             19252122 3 +  19376315 AC-A
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           14929 3 +     84689 AA-A
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3782668 3 +   6799190 AA-A
i Loris_tardigradus.ctg97                               C 0 C 0
s Macaca_arctoides.k141_2201161                             23873 3 +     74745 AC-A
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12710334 3 +  12821369 AC-A
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                2908 3 -     26467 AC-A
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           50779 3 +     63263 AC-A
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 2889 3 -     26361 AC-A
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 6079 3 -      7381 AC-A
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  49308 3 -     79256 AC-A
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196039406 3 + 196197964 ac-a
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11449576 3 +  11645122 ac-a
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   8262 3 -     46448 AC-A
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                5924 3 -     13212 AC-A
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 19605 3 -     55006 AC-A
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43844720 3 +  43892939 AC-A
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               20888 3 -     24607 AC-A
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               8259 3 -     27140 AC-A
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43441295 3 -  43563597 AC-A
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4454099 3 -   4543643 AC-A
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         5841 3 +     29742 AC-A
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Nomascus_annamensis.k141_1817463                            534 3 -      1070 AA-A
i Nomascus_annamensis.k141_1817463                      C 0 C 0
s Nomascus_concolor.k141_70405                                534 3 +      1153 AA-A
i Nomascus_concolor.k141_70405                          I 7 C 0
s Nomascus_gabriellae.k141_1400361                            469 3 -      2203 AA-A
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_1022                             488 3 -     11638 AA-A
i Nomascus_siki_b.tarseq_1022                       C 0 C 0
s Nomascus_siki_a.k141_1035055                                 3120 3 -      3602 AA-A
i Nomascus_siki_a.k141_1035055                            I 48 I 7
s Nycticebus_bengalensis.LG16                            65571498 3 -  95554990 AA-A
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_771591                            14907 3 +     16181 AA-A
i Nycticebus_coucang.k141_771591                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65679709 3 +  89412551 aa-a
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        4849 3 -     53940 AA-A
i Otolemur_crassicaudatus.k141_505435                   C 0 I 1
s Otolemur_garnettii.GL873528.1                          18012823 3 -  38779656 aa-a
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Pan_paniscus.CM003386.1                               127578204 3 - 205426864 ac-a
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.KZ622857.1                               332995 3 +    772158 aa-a
i Pan_troglodytes.KZ622857.1                            C 0 I 150
s Papio_anubis.CM001492.2                               188160084 3 - 188283584 ac-a
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              3174 3 +     25005 AC-A
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47517456 3 +  47705337 AC-A
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 71447 3 -    104429 AC-A
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    9979 3 +     14967 AC-A
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 5844 3 -      7628 AC-A
i Papio_ursinus.k141_1345919                            C 0 C 0
s Perodicticus_ibeanus.k141_117958                          10516 3 -     23713 TA-A
i Perodicticus_ibeanus.k141_117958                      C 0 I 1
s Perodicticus_potto.k141_1136815                           11656 3 +     61070 TA-A
i Perodicticus_potto.k141_1136815                       C 0 I 1
s Plecturocebus_bernhardi.k141_959214                       25804 3 +     44506 AA-A
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        26017 3 +     67491 AA-A
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      16256 3 -     98129 AA-A
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     25856 3 +    147771 AA-A
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         2492 3 -     43940 AA-A
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          6575 3 -     55515 AA-A
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         25929 3 +    152463 AA-A
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       3737 3 -    119457 AA-A
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         15652 3 +    134592 AA-A
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          26239 3 -     75465 AA-A
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              190827 3 -    373494 aa-a
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19811474 3 +  19899266 AA-A
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15676261 4 -  43202129 aaaa
i Saimiri_boliviensis.NW_024100938.1                    I 2 C 0
s Saimiri_cassiquiarensis.k141_808270                        8175 3 +     34089 AA-A
i Saimiri_cassiquiarensis.k141_808270                   I 2 C 0
s Saimiri_macrodon.k141_2087127                              8115 3 -     60842 AA-A
i Saimiri_macrodon.k141_2087127                         I 5 C 0
s Saimiri_oerstedii.k141_841116                              8209 3 +     67014 AA-A
i Saimiri_oerstedii.k141_841116                         I 2 C 0
s Saimiri_sciureus.k141_1947592                              8186 3 +     60816 AA-A
i Saimiri_sciureus.k141_1947592                         I 2 C 0
s Saimiri_ustus.k141_1282476                                 8123 3 -     76454 AA-A
i Saimiri_ustus.k141_1282476                            I 5 C 0
s Sapajus_apella.ctg10                                   17344910 3 -  30362882 TA-A
i Sapajus_apella.ctg10                                  I 2 C 0
s Sapajus_macrocephalus.k141_966464                         24231 3 -     62485 TA-A
i Sapajus_macrocephalus.k141_966464                     I 2 C 0
s Symphalangus_syndactylus.tarseq_24                        18501 3 -  13920577 AA-A
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tarsius_lariang.k141_609102                               31077 1 +     42269 A---
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               64386 1 +     65473 A---
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194011617 3 - 194193292 ac-a
i Theropithecus_gelada.CM009951.1                       C 0 C 0
e Eptesicus_fuscus.JH977687.1                             4708429 237 +   6522550 I
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Petromus_typicus.PetTyp_scaffold_33007                    16968 0 -     36578 C
e Sorex_araneus.JH798170.1                               17769723 0 -  27805282 C
e Dinomys_branickii.DinBra_scaffold_1996                   158442 1030 +    228994 I
e Erinaceus_europaeus.JH835290.1                         11540724 1 +  16010500 I
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           4051 456 -      6963 I
e Oryctolagus_cuniculus.CM000803.1                      141881456 0 + 163896628 C
e Ochotona_princeps.JH802095.1                            4996729 2205 -  23139505 I
e Lepus_americanus.LepAme_scaffold_62849                    18437 0 +     22452 C
e Perognathus_longimembris.PerPac_flattened_line_19359       1653 0 +     49596 C
e Dipodomys_stephensi.DipSte_scaffold_84338                  1818 0 -     11986 C
e Dipodomys_ordii.KN672545.1                              3659460 0 +   4240102 C
e Suricata_suricatta.SurSur_flattened_line_20339            32686 0 +     62062 C
e Chrysochloris_asiatica.ChrAsi_scaffold_629495              1904 0 -      3120 C
e Ziphius_cavirostris.ZipCav_flattened_line_60625            1636 0 -     13665 C
e Zalophus_californianus.ZalCal_flattened_line_4097        219589 0 -    227762 C
e Vulpes_lagopus.VulLag_flattened_line_2045                144143 0 -    281493 C
e Vicugna_pacos.KN269600.1                                1527924 0 -   2331223 C
e Ursus_maritimus.KK498671.1                              6520211 0 +  28682327 C
e Uropsilus_gracilis.UroGra_scaffold_69449                   9849 19 +     10241 I
e Tursiops_truncatus.MRVK01000923.1                      69316891 0 -  96451834 C
e Trichechus_manatus.JH594618.1                          16089534 0 +  31416278 C
e Tragulus_javanicus.TraJav_scaffold_14717                   9241 0 +     90398 C
e Tonatia_saurophila.TonSau_scaffold_3334                  137563 275 -    259118 I
e Tapirus_terrestris.TapTer_scaffold_14939                  61130 0 +     99546 C
e Tapirus_indicus.TapInd_scaffold_176                      810488 0 +   1148477 C
e Tamandua_tetradactyla.TamTet_scaffold_26877               16259 379 +     45698 I
e Tadarida_brasiliensis.TadBra_scaffold_61492                1822 242 +     20549 I
e Sus_scrofa.CM000824.4                                 189273670 1086 + 218635234 I
e Spilogale_gracilis.SpiGra_flattened_line_905             238521 0 -    276980 C
e Solenodon_paradoxus.SolPar_flattened_line_1012            23270 0 +    739146 C
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   39313 19 -    114521 I
e Saiga_tatarica.SaiTat_scaffold_1069354                      200 0 -       709 C
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Rhinolophus_sinicus.LVEH01000179.1                      1792303 0 +   2252614 C
e Rangifer_tarandus.RanTarSib_scaffold_24239                20204 0 +     68503 C
e Puma_concolor.QAVW01000427.1                          131539744 0 - 161321710 C
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Pteronura_brasiliensis.PteBra_flattened_line_1343        249999 0 -    344369 C
e Pteronotus_parnellii.KE867983.1                            5588 252 -     27784 I
e Procavia_capensis.ProCapCap_scaffold_149274                3648 0 -      9567 C
e Platanista_gangetica.PlaMin_flattened_line_72990           9098 0 +     21690 C
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Phocoena_phocoena.PhoPho_flattened_line_53071              2627 0 +      8220 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    121124 0 -    135482 C
e Pantholops_hodgsonii.KE114631.1                         1071221 0 -   1292953 C
e Panthera_tigris.KE721879.1                              5033096 0 -   6340057 C
e Panthera_pardus.KV860323.1                              3643448 0 +  18214204 C
e Panthera_onca.PanOnc_flattened_line_1615                  39633 0 +    295523 C
e Ovis_canadensis.OviCan_scaffold_6251                      83580 0 +    140051 C
e Ovis_aries.CM001582.2                                 134082352 0 - 275406953 C
e Otocyon_megalotis.JAEUCK010005121.1                      314916 0 -    505867 C
e Orycteropus_afer.OryAfe_flattened_line_13509              63940 0 -     66828 C
e Orcinus_orca.KB316965.1                                 7228162 0 -   7562323 C
e Okapia_johnstoni.LVCL01S0017931.1                         41423 0 +     78940 C
e Odocoileus_virginianus.KZ101650.1                       1083340 0 +   1425656 C
e Odobenus_rosmarus.KB229369.1                             684737 0 -   3126709 C
e Nyctereutes_procyonoides.CAJHUB010000786.1                37777 0 +   3668941 C
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Neophocaena_asiaeorientalis.KZ688543.1                  3954486 0 -   4490290 C
e Neomonachus_schauinslandi.NINY01007774.1                4490035 0 -  14209539 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             6589 379 -      8794 I
e Myotis_myotis.MyoMyo_scaffold_6123                        13515 236 +     66751 I
e Myotis_lucifugus.GL429887.1                             3468272 238 -   3747815 I
e Myotis_davidii.KB114863.1                               5022194 233 +   6462685 I
e Myotis_brandtii.KE161952.1                               970769 237 +   8389877 I
e Mustela_putorius.JH417978.1                             4427878 0 -  28371801 C
e Murina_feae.MurFea_scaffold_2254                          23900 236 -    100666 I
e Mungos_mungo.MunMun_flattened_line_8729                  150028 0 -    168139 C
e Moschus_moschiferus.MosMos_scaffold_78805                  5908 0 -     19904 C
e Mormoops_blainvillei.MorMeg_scaffold_2952                162937 259 +    265003 I
e Monodon_monoceros.MonMon_M_scaffold_5598                 149895 0 +    154973 C
e Mirounga_angustirostris.MirAng_flattened_line_8852        16636 0 -    104932 C
e Miniopterus_schreibersii.MinSch_scaffold_24116            36998 214 +     45743 I
e Miniopterus_natalensis.LDJU01000022.1                   8212509 213 +  10048721 I
e Micronycteris_hirsuta.MicHir_scaffold_37978               24387 274 -     32043 I
e Microgale_talazaci.MicTal_scaffold_34660                  41169 0 -     48017 C
e Mesoplodon_bidens.MesBid_scaffold_96348                    2103 0 -     12939 C
e Mellivora_capensis.MelCap_flattened_line_15433             6035 0 -     87323 C
e Megaderma_lyra.MegLyr_scaffold_3562                       65114 0 -    234502 C
e Manis_pentadactyla.KN017078.1                             39467 0 +     58827 C
e Manis_javanica.JSZB01003966.1                            149319 0 +    252755 C
e Lycaon_pictus.CM007556.1                               11094913 0 +  39895028 C
e Loxodonta_africana.GL010040.1                          20598457 0 -  62548349 C
e Lipotes_vexillifer.KE558548.1                            139466 0 +   3060487 C
e Leptonychotes_weddellii.KB714749.1                      3091140 0 -   3498232 C
e Lasiurus_borealis.LasBor_scaffold_59542                    5042 241 +     26176 I
e Kogia_breviceps.KogBre_flattened_line_35920               27101 0 +     37189 C
e Inia_geoffrensis.IniGeo_flattened_line_66725              12514 0 +     17520 C
e Hyaena_hyaena.HyaHya_flattened_line_20729                 22947 0 -     67322 C
e Hipposideros_galeritus.HipGal_scaffold_52959                472 0 +     26078 C
e Hipposideros_armiger.JXIK01001085.1                      282703 0 -    477199 C
e Hippopotamus_amphibius.HipAmp_scaffold_1308              150300 0 +    277961 C
e Heterohyrax_brucei.HetBruBak_scaffold_25354               62542 0 +     73687 C
e Hemitragus_hylocrius.HemHyl_scaffold_16669                32562 0 -     91191 C
e Helogale_parvula.HelPar_flattened_line_22962              22347 0 +     53719 C
e Giraffa_tippelskirchi.LVKQ01S012154.1                    185688 0 -    189561 C
e Felis_nigripes.FelNig_flattened_line_8080                 26705 0 +     52776 C
e Felis_catus_fca126.CM031420.1                         129285610 0 - 158578461 C
e Eubalaena_japonica.EubJap_flattened_line_7756             64977 0 +     89355 C
e Eschrichtius_robustus.EscRob_flattened_line_685          318520 0 +    330699 C
e Equus_przewalskii.ATBW01073585.1                          16255 0 +     92910 C
e Equus_caballus.CM000402.2                              13354765 0 +  41866177 C
e Equus_asinus.JREZ01000062.1                             5856265 0 -   7175178 C
e Enhydra_lutris.KZ291749.1                              85877148 0 +  99434291 C
e Elephantulus_edwardii.JH947210.1                        7830035 1277 +  15467074 I
e Elaphurus_davidianus.JRFZ01086400.1                     1495890 0 +   1727528 C
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Echinops_telfairi.JH980316.1                           22999931 2 -  44670279 I
e Diceros_bicornis.DicBicMic_scaffold_9545                   6539 0 +    151128 C
e Dicerorhinus_sumatrensis.PEKH010003161.1                 325898 0 +    993696 C
e Desmodus_rotundus.KZ672188.1                           18700517 262 -  18957592 I
e Delphinapterus_leucas.KZ290064.1                       80040302 0 -  96802777 C
e Dasypus_novemcinctus.JH568778.1                          185121 383 -   6883506 I
e Cryptoprocta_ferox.CryFer_flattened_line_19014            57206 0 -     70449 C
e Crocidura_indochinensis.CroInd_scaffold_27484              1304 0 -     22648 C
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1427 0 -      5782 C
e Condylura_cristata.JH655880.1                          60621870 8 +  78930452 I
e Choloepus_hoffmanni.KN194586.1                           763329 503 +    964067 I
e Choloepus_didactylus.ChoDid_scaffold_36182                18024 504 -     21363 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_160623         7007 0 -      9338 C
e Catagonus_wagneri.CatWag_scaffold_1305                   162370 0 -    276539 C
e Carollia_perspicillata.CarPer_scaffold_4436               61226 261 +     67245 I
e Capra_hircus.CM004562.1                               135711509 0 - 157403528 C
e Capra_aegagrus.CM003214.1                              21330292 0 + 157394656 C
e Canis_lupus_orion.HG994411.1                           16462242 0 -  44759192 C
e Canis_lupus_familiaris.chr31                           11095457 0 +  39895921 C
e Canis_lupus_dingo.QKWQ01001993.1                       11272746 0 -  35597290 C
e Canis_lupus_VD.CanFam_VD_scaffold_16982                   21037 0 +     87036 C
e CanFam4.chr31                                          11526063 0 +  39901454 C
e Camelus_ferus.KB016973.1                                2976252 0 +   6889770 C
e Camelus_dromedarius.KN271192.1                           400516 0 -  15254737 C
e Camelus_bactrianus.KN276303.1                           3222814 0 -   8989139 C
e Bubalus_bubalis.KI419065.1                               674333 0 +   1914593 C
e Bos_taurus.CM000177.6                                  22664570 0 + 158972876 C
e Bos_mutus.JH883513.1                                     418181 0 +    998990 C
e Bos_indicus.CM003021.1                                 22955916 0 + 161108492 C
e Bison_bison.KN264915.1                                   301818 0 -   6870073 C
e Beatragus_hunteri.BeaHun_scaffold_21644                   47674 0 -     72089 C
e Balaenoptera_bonaerensis.DF502048.1                        8850 0 -     13118 C
e Balaenoptera_acutorostrata.KI537095.1                  26383677 0 +  51448160 C
e Artibeus_jamaicensis.ArtJam_scaffold_41619                10440 261 -     29036 I
e Antilocapra_americana.AntAmePen_scaffold_27338             2643 0 +     55446 C
e Anoura_caudifer.AnoCau_scaffold_422                      392020 257 -    631301 I
e Ammotragus_lervia.NIVO01013474.1                        3525212 0 +   4113121 C
e Ailurus_fulgens.LNAC01000003.1                          7099694 0 -  16596857 C
e Ailuropoda_melanoleuca.LNAT01000321.1                  10662913 0 +  23371972 C
e Acinonyx_jubatus.LLWD01000356.1                         2039223 0 +   3721120 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           20903 21 -    119109 I
e Glis_glis.GliGli_scaffold_79770                           16006 0 -     18683 C
e Zapus_hudsonius.ZapHud_scaffold_64392                     20230 0 -     20485 C
e Jaculus_jaculus.JH725517.1                              8577100 0 +  11848649 C
e Hylobates_pileatus_a.tarseq_592                             35773 13 -     60944 I
e Allactaga_bullata.AllBul_scaffold_70162                   21416 0 -     22067 C
e Galeopterus_variegatus.GalVar_scaffold_354               159242 0 +    324696 C
e Microtus_ochrogaster.CM001673.1                        22823892 0 -  98408828 C
e Xerus_inauris.XerIna_scaffold_7898                       128400 2868 -    134049 I
e Varecia_variegata.k141_775891                             28632 0 -     33872 C
e Varecia_rubra.k141_432109                                  9097 0 -     20643 C
e Tupaia_tana.TupTan_flattened_line_68454                    9400 0 +     13056 C
e Tupaia_chinensis.KB320831.1                             2797466 0 -   3938065 C
e Trachypithecus_pileatus.k141_1022309                       5226 0 +     13828 C
e Trachypithecus_phayrei.ctg3                            44662914 0 -  44834318 C
e Trachypithecus_obscurus.k141_1115109                       8130 0 -     28054 C
e Trachypithecus_melamera.k141_699241                        2986 0 -     24393 C
e Trachypithecus_leucocephalus.k141_381681                   3005 0 +     12481 C
e Trachypithecus_laotum.k141_760702                          4719 0 +     14371 C
e Trachypithecus_hatinhensis.k141_504423                     6067 0 -     15592 C
e Trachypithecus_germaini.k141_868450                        3883 0 -     11566 C
e Trachypithecus_geei.k141_670367                           46082 0 -     54611 C
e Trachypithecus_francoisi.k141_768164                       4689 0 -     14244 C
e Trachypithecus_cristatus.k141_1011511                      5261 0 -     12939 C
e Trachypithecus_crepusculus.k141_1588528                   23360 0 -     32910 C
e Trachypithecus_auratus.k141_738098                        29800 0 +     38948 C
e Spermophilus_dauricus.KZ294190.1                        2243738 0 +   2842873 C
e Sigmodon_hispidus.SigHis_scaffold_11332                  104700 0 -    120886 C
e Semnopithecus_vetulus.k141_1143185                        16479 0 +     30600 C
e Semnopithecus_schistaceus.k141_387461                     33457 0 +     42640 C
e Semnopithecus_priam.k141_410937                           40312 0 +     46263 C
e Semnopithecus_johnii.k141_785014                         121532 0 +    130994 C
e Semnopithecus_hypoleucos.k141_761524                      11528 0 +     20762 C
e Semnopithecus_entellus.k141_1572367                        6153 0 +     15331 C
e Rhinopithecus_strykeri.ctg4                            44859307 0 -  45163003 C
e Rhinopithecus_bieti.k119_554384                            2917 0 -     17045 C
e Rattus_norvegicus.chr11                                13917347 0 +  90463843 C
e Pygathrix_nigripes_a.k141_101123                             8537 0 +     18040 C
e Pygathrix_nigripes_b.ctg79                                 6809148 0 +   6970761 C
e Pygathrix_cinerea.k141_374971                             32651 0 +     56732 C
e Psammomys_obesus.NESX01026517.1                           37932 0 +     77221 C
e Propithecus_verreauxi.k141_158021                         43097 0 -     48185 C
e Propithecus_tattersalli.k141_907138                       20833 0 -     53241 C
e Propithecus_perrieri.k141_7554                            21199 0 +     27322 C
e Propithecus_edwardsi.k141_1317105                         39276 0 -     44753 C
e Propithecus_diadema.k141_577245                           46889 0 +     52369 C
e Propithecus_coronatus.k141_1353159                         7541 0 +     11805 C
e Propithecus_coquerelli.NW_012147863.1                     21485 0 -     30946 C
e Prolemur_simus.MPIZ01000048.1                           6852455 0 +  12164890 C
e Presbytis_mitrata.k141_860013                              8661 0 +     14865 C
e Presbytis_comata.k141_672698                               8546 0 -     15069 C
e Pithecia_vanzolinii.k141_831006                           15424 0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514 0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521 0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292 0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093 0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038 0 +     78826 C
e Pithecia_albicans.k141_991845                             45662 0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000036.1               26743271 0 +  26888534 C
e Piliocolobus_kirkii.k141_929665                            4788 0 +      7694 C
e Piliocolobus_gordonorum.k141_1270531                       5421 0 -     17985 C
e Piliocolobus_badius.k141_1987485                           4802 0 -      5908 C
e Peromyscus_maniculatus.KI615518.1                       4955136 0 -   8017169 C
e Onychomys_torridus.OnyTor_scaffold_12578                  42767 0 +     62360 C
e Ondatra_zibethicus.OndZib_scaffold_6821                  130082 0 +    145789 C
e Octodon_degus.JH651621.1                                3687420 1881 +  10294119 I
e Nasalis_larvatus.k141_153429                              11264 0 +     48152 C
e Nannospalax_galili.KL201303.1                            119878 0 +    362372 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     91920 1922 -    117718 I
e Muscardinus_avellanarius.MusAve_scaffold_9643             14544 0 +     98495 C
e Mus_spretus.CM004110.1                                 74336288 0 +  97876770 C
e Mus_pahari.LT608305.1                                  67559938 0 +  89017189 C
e Mus_musculus.chr16                                     75493561 0 +  98207768 C
e Mus_caroli.LT608236.1                                  70771508 0 +  92629107 C
e Mirza_zaza.k141_593947                                     4826 1 -     12809 I
e Microcebus_murinus.CM007691.1                          16514144 0 +  47401472 C
e Mesocricetus_auratus.KB708139.1                         1051203 0 -  26018355 C
e Meriones_unguiculatus.MerUng_scaffold_52233               15581 0 +     15977 C
e Marmota_marmota.CZRN01000005.1                         36877722 0 +  64221397 C
e Lepilemur_septentrionalis.k141_710646                      2174 0 -     13103 C
e Lepilemur_ruficaudatus.k141_574529                        36128 0 -     38897 C
e Lepilemur_dorsalis.k141_134267                            57748 0 +     63517 C
e Lepilemur_ankaranensis.k141_884009                        28384 0 +     39228 C
e Lemur_catta.scaffold_1                                258411081 0 - 285822530 C
e Indri_indri.k141_2197838                                   1208 0 +      3484 C
e Ictidomys_tridecemlineatus.JH393315.1                   7129857 0 +  13083262 C
e Hystrix_cristata.HysCri_scaffold_50788                     7688 1865 +     22540 I
e Heterocephalus_glaber.JH602058.1                        2560301 0 +  31725842 C
e Hapalemur_occidentalis.k141_797938                        49409 0 -     54384 C
e Hapalemur_meridionalis.k141_186231                        32783 0 -     42470 C
e Hapalemur_griseus.k141_1387522                             9534 0 +     56096 C
e Hapalemur_gilberti.k141_279011                             4207 0 -     11661 C
e Hapalemur_alaotrensis.k141_1280836                         5729 0 +     10286 C
e Graphiurus_murinus.GraMur_scaffold_4493                   79397 0 +    118900 C
e Fukomys_damarensis.KN123630.1                          13895781 0 -  19261668 C
e Eulemur_sanfordi.k141_186399                              19736 0 -     29447 C
e Eulemur_rufus.k141_1620292                                36997 0 +     46535 C
e Eulemur_rubriventer.k141_411740                           22262 0 +     26808 C
e Eulemur_mongoz.k141_825972                                19806 0 +     27497 C
e Eulemur_macaco.k141_747087                                 3134 0 -     19505 C
e Eulemur_fulvus.k141_653297                                15149 0 +    109717 C
e Eulemur_flavifrons.k141_903901                            11666 0 +     60246 C
e Eulemur_coronatus.k141_3240342                            15341 0 +     36558 C
e Eulemur_collaris.k141_1015201                              2208 0 -      4292 C
e Eulemur_albifrons.k141_715837                              8945 0 +     13586 C
e Ellobius_talpinus.LOJH01198462.1                           1224 0 -      1901 C
e Ellobius_lutescens.LOEQ01003611.1                        243482 0 -    369425 C
e Dolichotis_patagonum.DolPat_scaffold_14102                39606 21 -     73477 I
e Daubentonia_madagascariensis.ctg11                     16848791 0 +  31942871 C
e Dasyprocta_punctata.DasPun_flattened_line_634             61634 0 -    236241 C
e Cuniculus_paca.CunPac_flattened_line_16637                20496 0 +     26546 C
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 32592 1717 -     67205 I
e Ctenodactylus_gundi.CteGun_scaffold_447                  213671 0 -    956709 C
e Cricetulus_griseus.LT883672.1                          53034678 0 +  72327488 C
e Cricetomys_gambianus.CriGam_scaffold_949                 282308 0 -    399297 C
e Colobus_polykomos.k141_1406057                            19335 0 +     23629 C
e Colobus_guereza.LG08                                  147667351 0 + 156195979 C
e Colobus_angolensis.KN985967.1                          10889423 0 +  10971483 C
e Chinchilla_lanigera.JH721867.1                         15963245 964 +  43084221 I
e Cheirogaleus_medius.k141_133808                           11964 0 +     13308 C
e Cheirogaleus_major.k141_1157592                           62863 0 -     68416 C
e Cavia_tschudii.CavTsc_scaffold_488                       177725 1742 +    436027 I
e Cavia_porcellus.DS562889.1                             15799553 1742 -  24440124 I
e Cavia_aperea.AVPZ01000278.1                            15787615 1741 -  24422027 I
e Avahi_peyrierasi.k141_798820                               4252 0 +      6337 C
e Avahi_laniger.k141_2840928                                10636 0 -     16375 C
e Acomys_cahirinus.AcoCah_scaffold_1625                    117444 0 -    189883 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               17234 7 +    209709 TTAATCT
s Acomys_cahirinus.AcoCah_scaffold_1625                    117444 1 -    189883 -----T-
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   21416 1 -     22067 -----C-
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   5096 7 -     60446 TTAATCT
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         5813 7 -     29318 TTAATCT
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         4751 7 +     38766 TTAATCT
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          5707 7 -     80423 TTAATCT
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                               705 3 +     19852 TTA----
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                2961 3 -     12443 TTA----
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                              260 3 +      5070 TTA----
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                    5 3 -      1641 TTA----
i Alouatta_juara.k141_799181                            N 0 C 0
s Alouatta_macconnelli.k141_2318944                          2744 3 -     24210 TTA----
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           29326 3 -     30219 TTA----
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_405616                              5162 3 +     16794 TTA----
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                             294 3 -      1470 TTA----
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             4439 3 -      9835 TTA----
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3525212 1 +   4113121 ------a
i Ammotragus_lervia.NIVO01013474.1                      C 0 I 5
s Antilocapra_americana.AntAmePen_scaffold_27338             2643 1 +     55446 ------A
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 I 5
s Aotus_azarae.k141_3170768                                 66052 3 +     78111 TTA----
i Aotus_azarae.k141_3170768                             I 1 C 0
s Aotus_griseimembra.k141_3275623                            8998 3 +     22701 TTA----
i Aotus_griseimembra.k141_3275623                       I 1 C 0
s Aotus_nancymaae.KZ196176.1                              5752956 3 +   9889416 tta----
i Aotus_nancymaae.KZ196176.1                            I 1 C 0
s Aotus_trivirgatus.k141_1740727                             9554 3 -    104377 TTA----
i Aotus_trivirgatus.k141_1740727                        I 1 C 0
s Aotus_vociferans.k141_718647                               9561 3 +     23246 TTA----
i Aotus_vociferans.k141_718647                          I 1 C 0
s Arctocebus_calabarensis.k141_587554                        6149 7 +      9265 TAAAACA
i Arctocebus_calabarensis.k141_587554                   I 1 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9542847 3 +  39197703 TTA----
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             64120 3 +     85812 TTA----
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                15133 3 +     89302 TTA----
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             19634 3 -     58268 TTA----
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             67628 3 +    119057 TTA----
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               9597 3 -     25888 TTA----
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26383677 1 +  51448160 ------t
i Balaenoptera_acutorostrata.KI537095.1                 C 0 I 5
s Balaenoptera_bonaerensis.DF502048.1                        8850 1 -     13118 ------t
i Balaenoptera_bonaerensis.DF502048.1                   C 0 I 5
s Beatragus_hunteri.BeaHun_scaffold_21644                   47674 1 -     72089 ------A
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 I 5
s Bison_bison.KN264915.1                                   301818 1 -   6870073 ------t
i Bison_bison.KN264915.1                                C 0 I 5
s Bos_indicus.CM003021.1                                 22955916 1 + 161108492 ------t
i Bos_indicus.CM003021.1                                C 0 I 5
s Bos_mutus.JH883513.1                                     418181 1 +    998990 ------t
i Bos_mutus.JH883513.1                                  C 0 I 5
s Bos_taurus.CM000177.6                                  22664570 1 + 158972876 ------t
i Bos_taurus.CM000177.6                                 C 0 I 5
s Bubalus_bubalis.KI419065.1                               674333 1 +   1914593 ------a
i Bubalus_bubalis.KI419065.1                            C 0 I 5
s Cacajao_ayresi.k141_724503                               117500 3 -    171031 TTA----
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 16520 3 +    125063 TTA----
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                18567 3 -    216513 TTA----
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       11110 3 -    134917 TTA----
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3222814 1 -   8989139 ------a
i Camelus_bactrianus.KN276303.1                         C 0 I 5
s Camelus_dromedarius.KN271192.1                           400516 1 -  15254737 ------a
i Camelus_dromedarius.KN271192.1                        C 0 I 5
s Camelus_ferus.KB016973.1                                2976252 1 +   6889770 ------a
i Camelus_ferus.KB016973.1                              C 0 I 5
s Capra_aegagrus.CM003214.1                              21330292 1 + 157394656 ------a
i Capra_aegagrus.CM003214.1                             C 0 I 5
s Capra_hircus.CM004562.1                               135711509 1 - 157403528 ------a
i Capra_hircus.CM004562.1                               C 0 I 5
s Catagonus_wagneri.CatWag_scaffold_1305                   162370 1 -    276539 ------A
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 I 5
s Cebus_albifrons.Contig22                               18894332 3 -  29618158 tta----
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                11876 3 -     26817 TTA----
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                16120 3 +     25043 TTA----
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4367250 1 +   7569818 ------a
i Ceratotherium_simum.JH767818.1                        C 0 I 1
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         7007 1 -      9338 ------A
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 I 1
s Cercocebus_atys.KQ010443.1                              6559037 7 +   6739814 ttaatct
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      30514 7 +     60454 TTAATCT
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          5718 7 -     21101 TTAATCT
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         63028 7 -    107033 TTAATCT
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        5889 7 -     17608 TTAATCT
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          3054 7 +     45019 TTAATCT
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           3116 7 +     15177 TTAATCT
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          5938 7 +     16677 TTAATCT
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           28126 7 +     35983 TTAATCT
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11994657 7 +  12117833 TTAATCT
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46481418 7 +  46592721 TTAATCT
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      44969 7 -     45581 TTAATCT
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       5950 7 +     35577 TTAATCT
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        5744 7 -     25661 TTAATCT
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        5702 7 -     17744 TTAATCT
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        25287 7 +     37128 TTAATCT
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Cheracebus_lucifer.k141_619653                             9158 3 -     18223 TTA----
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                               897 3 +    188999 TTA----
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           45196 3 +     57117 TTA----
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          49875 3 +     54541 TTA----
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chiropotes_israelita.k141_1189915                         74679 3 +    196370 TTA----
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          18860 3 +     40510 TTA----
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15143472 7 -  15256731 TTAATCT
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      37936 7 -     53260 TTAATCT
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101148495 7 + 101219884 ttaatct
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_629495              1904 1 -      3120 ------A
i Chrysochloris_asiatica.ChrAsi_scaffold_629495         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         1427 1 -      5782 ------T
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 282308 1 -    399297 -----A-
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53034678 1 +  72327488 -----A-
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              1304 1 -     22648 ------C
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  213671 2 -    956709 -----CG
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                20496 1 +     26546 -----A-
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 I 5
s Dasyprocta_punctata.DasPun_flattened_line_634             61634 1 -    236241 -----A-
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 I 31
s Delphinapterus_leucas.KZ290064.1                       80040302 1 -  96802777 ------t
i Delphinapterus_leucas.KZ290064.1                      C 0 I 5
s Dicerorhinus_sumatrensis.PEKH010003161.1                 325898 1 +    993696 ------t
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 I 1
s Diceros_bicornis.DicBicMic_scaffold_9545                   6539 1 +    151128 ------A
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 I 1
s Dipodomys_ordii.KN672545.1                              3659460 1 +   4240102 -----a-
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  1818 1 -     11986 -----C-
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1495890 1 +   1727528 ------a
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 I 5
s Ellobius_lutescens.LOEQ01003611.1                        243482 1 -    369425 -----G-
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01198462.1                           1224 1 -      1901 -----G-
i Ellobius_talpinus.LOJH01198462.1                      C 0 C 0
s Equus_asinus.JREZ01000062.1                             5856265 1 -   7175178 ------a
i Equus_asinus.JREZ01000062.1                           C 0 I 1
s Equus_caballus.CM000402.2                              13354765 1 +  41866177 ------a
i Equus_caballus.CM000402.2                             C 0 I 1
s Equus_przewalskii.ATBW01073585.1                          16255 1 +     92910 ------a
i Equus_przewalskii.ATBW01073585.1                      C 0 I 1
s Erinaceus_europaeus.JH835290.1                         11540725 1 +  16010500 ------t
i Erinaceus_europaeus.JH835290.1                        I 1 C 0
s Erythrocebus_patas.Contig8                             48780505 7 -  48907691 TTAATCT
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          318520 1 +    330699 ------T
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 I 5
s Eubalaena_japonica.EubJap_flattened_line_7756             64977 1 +     89355 ------T
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 I 5
s Fukomys_damarensis.KN123630.1                          13895781 1 -  19261668 -----A-
i Fukomys_damarensis.KN123630.1                         C 0 I 5
s Galago_moholi.ctg555                                     214992 7 -    847004 TAAAACA
i Galago_moholi.ctg555                                  I 1 C 0
s Galago_senegalensis.k141_964197                           17353 7 -     43889 TAAAACA
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          14497 7 +     27357 TAAAACA
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    185688 1 -    189561 ------a
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 I 5
s Glis_glis.GliGli_scaffold_79770                           16006 2 -     18683 -----ac
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               8949 7 -     14630 TTAATCT
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119656049 7 - 195582420 ttaatct
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   79397 2 +    118900 -----ac
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                32562 1 -     91191 ------A
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 I 5
s Heterocephalus_glaber.JH602058.1                        2560301 1 +  31725842 -----A-
i Heterocephalus_glaber.JH602058.1                      C 0 I 5
s Heterohyrax_brucei.HetBruBak_scaffold_25354               62542 1 +     73687 ------G
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              150300 1 +    277961 ------T
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 I 5
s Hipposideros_armiger.JXIK01001085.1                      282703 1 -    477199 ------t
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959                472 1 +     26078 ------T
i Hipposideros_galeritus.HipGal_scaffold_52959          C 0 C 0
s Hoolock_leuconedys.ctg315                                   349934 7 +    431944 TTAATCT
i Hoolock_leuconedys.ctg315                                C 0 I 14
s Hylobates_abbotti.k141_1816750                             1411 7 +      3202 TTAATCT
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1633646                              1381 7 -      2102 TTAATCT
i Hylobates_agilis.k141_1633646                         C 0 C 0
s Hylobates_klossii.k141_468230                              2898 7 +      5464 TTAATCT
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14628246 7 -  25970782 TTAATCT
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                             797 7 +      4161 TTAATCT
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7129857 2 +  13083262 -----GC
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 I 62
s Inia_geoffrensis.IniGeo_flattened_line_66725              12514 1 +     17520 ------T
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 I 5
s Jaculus_jaculus.JH725517.1                              8577100 1 +  11848649 -----C-
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               27101 1 +     37189 ------T
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 I 5
s Lagothrix_lagothricha.k141_12968                          53716 3 -    147782 TTC----
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    18437 2 +     22452 -----ac
i Lepus_americanus.LepAme_scaffold_62849                C 0 I 1
s Lipotes_vexillifer.KE558548.1                            139466 1 +   3060487 ------t
i Lipotes_vexillifer.KE558548.1                         C 0 I 5
s Lophocebus_aterrimus.ctg55                             19252125 7 +  19376315 TCAATCT
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           14932 7 +     84689 TAAAACA
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3782671 7 +   6799190 TAAAACA
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20598457 1 -  62548349 ------a
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Macaca_arctoides.k141_2201161                             23876 7 +     74745 TTAATCT
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12710337 7 +  12821369 TTAATCT
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                2911 7 -     26467 TTAATCT
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           50782 7 +     63263 TTAATCT
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 2892 7 -     26361 TTAATCT
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 6082 7 -      7381 TTAATCT
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  49311 7 -     79256 TTAATCT
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196039409 7 + 196197964 ttaatct
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11449579 7 +  11645122 ttaatct
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   8265 7 -     46448 TTAATCT
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                5927 7 -     13212 TTAATCT
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 19608 7 -     55006 TTAATCT
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43844723 7 +  43892939 TTAATCT
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               20891 7 -     24607 TTAATCT
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               8262 7 -     27140 TTAATCT
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43441298 7 -  43563597 TTAATCT
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4454102 7 -   4543643 TTAATCT
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            149319 1 +    252755 ------t
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             39467 1 +     58827 ------t
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36877722 2 +  64221397 -----gc
i Marmota_marmota.CZRN01000005.1                        C 0 I 66
s Megaderma_lyra.MegLyr_scaffold_3562                       65114 1 -    234502 ------T
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 I 1
s Meriones_unguiculatus.MerUng_scaffold_52233               15581 1 +     15977 -----T-
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1051203 1 -  26018355 -----A-
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    2103 1 -     12939 ------T
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 I 5
s Microgale_talazaci.MicTal_scaffold_34660                  41169 1 -     48017 ------A
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22823892 1 -  98408828 -----A-
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         5844 7 +     29742 TTAATCT
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 149895 1 +    154973 ------T
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 I 5
s Moschus_moschiferus.MosMos_scaffold_78805                  5908 1 -     19904 ------A
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 I 5
s Mus_caroli.LT608236.1                                  70771508 1 +  92629107 -----A-
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75493561 1 +  98207768 -----A-
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67559938 1 +  89017189 -----A-
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74336288 1 +  97876770 -----A-
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             14544 2 +     98495 -----aa
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Nannospalax_galili.KL201303.1                            119878 1 +    362372 -----t-
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3954486 1 -   4490290 ------t
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 I 5
s Nomascus_annamensis.k141_1817463                            537 7 -      1070 TTAACCT
i Nomascus_annamensis.k141_1817463                      C 0 C 0
s Nomascus_concolor.k141_70405                                537 7 +      1153 TTAATCT
i Nomascus_concolor.k141_70405                          C 0 C 0
s Nomascus_gabriellae.k141_1400361                            472 7 -      2203 TTAATCT
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_1022                             491 7 -     11638 TTAATCT
i Nomascus_siki_b.tarseq_1022                       C 0 C 0
s Nomascus_siki_a.k141_421408                                   381 7 +     16235 TTAATCT
i Nomascus_siki_a.k141_421408                             I 2 I 18
s Nycticebus_bengalensis.LG16                            65571501 7 -  95554990 TAAAACA
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_771591                            14910 7 +     16181 TAAAACA
i Nycticebus_coucang.k141_771591                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65679712 7 +  89412551 taaaaca
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1083340 1 +   1425656 ------a
i Odocoileus_virginianus.KZ101650.1                     C 0 I 5
s Okapia_johnstoni.LVCL01S0017931.1                         41423 1 +     78940 ------a
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 I 5
s Ondatra_zibethicus.OndZib_scaffold_6821                  130082 1 +    145789 -----G-
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  42767 1 +     62360 -----A-
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7228162 1 -   7562323 ------t
i Orcinus_orca.KB316965.1                               C 0 I 5
s Orycteropus_afer.OryAfe_flattened_line_13509              63940 1 -     66828 ------A
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141881456 2 + 163896628 -----ac
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        4853 7 -     53940 TAAAACA
i Otolemur_crassicaudatus.k141_505435                   I 1 C 0
s Otolemur_garnettii.GL873528.1                          18012826 7 -  38779656 taaaaca
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134082352 1 - 275406953 ------a
i Ovis_aries.CM001582.2                                 C 0 I 5
s Ovis_canadensis.OviCan_scaffold_6251                      83580 1 +    140051 ------A
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 I 5
s Pan_paniscus.CM003386.1                               127578207 7 - 205426864 ttaatCT
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120155367 7 - 196562556 ttaatCT
i Pan_troglodytes.CM009241.2                            I 10 C 0
s Pantholops_hodgsonii.KE114631.1                         1071221 1 -   1292953 ------a
i Pantholops_hodgsonii.KE114631.1                       C 0 I 5
s Papio_anubis.CM001492.2                               188160087 7 - 188283584 ttaatct
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              3177 7 +     25005 TTAATCT
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47517459 7 +  47705337 TTAATCT
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 71450 7 -    104429 TTAATCT
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                    9982 7 +     14967 TTAATCT
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 5847 7 -      7628 TTAATCT
i Papio_ursinus.k141_1345919                            C 0 C 0
s Perodicticus_ibeanus.k141_117958                          10520 7 -     23713 TACAACA
i Perodicticus_ibeanus.k141_117958                      I 1 C 0
s Perodicticus_potto.k141_1136815                           11660 7 +     61070 TACAACA
i Perodicticus_potto.k141_1136815                       I 1 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       1653 1 +     49596 -----A-
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 I 10
s Peromyscus_maniculatus.KI615518.1                       4955136 1 -   8017169 -----A-
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    16968 1 -     36578 -----A-
i Petromus_typicus.PetTyp_scaffold_33007                C 0 I 5
s Phocoena_phocoena.PhoPho_flattened_line_53071              2627 1 +      8220 ------T
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 I 5
s Platanista_gangetica.PlaMin_flattened_line_72990           9098 1 +     21690 ------T
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 I 5
s Plecturocebus_bernhardi.k141_959214                       25807 3 +     44506 TTA----
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        26020 3 +     67491 TTA----
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      16259 3 -     98129 TTA----
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     25859 3 +    147771 TTA----
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         2495 3 -     43940 TTA----
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          6578 3 -     55515 TTA----
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         25932 3 +    152463 TTA----
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       3740 3 -    119457 TTA----
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         15655 3 +    134592 TTA----
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          26242 3 -     75465 TTA----
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              190830 7 -    373494 ttaatct
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19811477 7 +  19899266 TTAATCT
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                3648 1 -      9567 ------G
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Psammomys_obesus.NESX01026517.1                           37932 1 +     77221 -----t-
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                20204 1 +     68503 ------A
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 I 5
s Rattus_norvegicus.chr11                                13917347 1 +  90463843 -----A-
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1792303 1 +   2252614 ------t
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_1069354                      200 1 -       709 ------A
i Saiga_tatarica.SaiTat_scaffold_1069354                C 0 I 5
s Saimiri_boliviensis.NW_024100938.1                     15676265 3 -  43202129 tta----
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        8178 3 +     34089 TTA----
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              8118 3 -     60842 TTA----
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              8212 3 +     67014 TTA----
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              8189 3 +     60816 TTA----
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 8126 3 -     76454 TTA----
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17344913 3 -  30362882 TTA----
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         24234 3 -     62485 TTA----
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   39332 1 -    114521 ------C
i Scalopus_aquaticus.ScaAqu_scaffold_9300               I 19 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  104700 1 -    120886 -----A-
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            23270 1 +    739146 ------C
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17769723 1 -  27805282 ------t
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2243738 2 +   2842873 -----GC
i Spermophilus_dauricus.KZ294190.1                      C 0 I 32
s Symphalangus_syndactylus.tarseq_24                        18504 7 -  13920577 TTAATCT
i Symphalangus_syndactylus.tarseq_24                    C 0 I 1
s Tapirus_indicus.TapInd_scaffold_176                      810488 1 +   1148477 ------T
i Tapirus_indicus.TapInd_scaffold_176                   C 0 I 1
s Tapirus_terrestris.TapTer_scaffold_14939                  61130 1 +     99546 ------T
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 I 1
s Theropithecus_gelada.CM009951.1                       194011620 7 - 194193292 ttaatct
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   9241 1 +     90398 ------A
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 I 5
s Trichechus_manatus.JH594618.1                          16089534 1 +  31416278 ------a
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2797466 2 -   3938065 -----ag
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    9400 2 +     13056 -----AG
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69316891 1 -  96451834 ------t
i Tursiops_truncatus.MRVK01000923.1                     C 0 I 5
s Uropsilus_gracilis.UroGra_scaffold_69449                   9868 1 +     10241 ------C
i Uropsilus_gracilis.UroGra_scaffold_69449              I 19 C 0
s Vicugna_pacos.KN269600.1                                1527924 1 -   2331223 ------a
i Vicugna_pacos.KN269600.1                              C 0 I 5
s Zapus_hudsonius.ZapHud_scaffold_64392                     20230 1 -     20485 -----C-
i Zapus_hudsonius.ZapHud_scaffold_64392                 C 0 I 1
s Ziphius_cavirostris.ZipCav_flattened_line_60625            1636 1 -     13665 ------t
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 I 5
e Eptesicus_fuscus.JH977687.1                             4708429 237 +   6522550 I
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Dinomys_branickii.DinBra_scaffold_1996                   158442 1030 +    228994 I
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           4051 456 -      6963 I
e Ochotona_princeps.JH802095.1                            4996729 2205 -  23139505 I
e Suricata_suricatta.SurSur_flattened_line_20339            32686 0 +     62062 C
e Zalophus_californianus.ZalCal_flattened_line_4097        219589 0 -    227762 C
e Vulpes_lagopus.VulLag_flattened_line_2045                144143 0 -    281493 C
e Ursus_maritimus.KK498671.1                              6520211 0 +  28682327 C
e Tonatia_saurophila.TonSau_scaffold_3334                  137563 275 -    259118 I
e Tamandua_tetradactyla.TamTet_scaffold_26877               16259 379 +     45698 I
e Tadarida_brasiliensis.TadBra_scaffold_61492                1822 242 +     20549 I
e Sus_scrofa.CM000824.4                                 189273670 1086 + 218635234 I
e Spilogale_gracilis.SpiGra_flattened_line_905             238521 0 -    276980 C
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Puma_concolor.QAVW01000427.1                          131539744 0 - 161321710 C
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Pteronura_brasiliensis.PteBra_flattened_line_1343        249999 0 -    344369 C
e Pteronotus_parnellii.KE867983.1                            5588 252 -     27784 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    121124 0 -    135482 C
e Panthera_tigris.KE721879.1                              5033096 0 -   6340057 C
e Panthera_pardus.KV860323.1                              3643448 0 +  18214204 C
e Panthera_onca.PanOnc_flattened_line_1615                  39633 0 +    295523 C
e Otocyon_megalotis.JAEUCK010005121.1                      314916 0 -    505867 C
e Odobenus_rosmarus.KB229369.1                             684737 0 -   3126709 C
e Nyctereutes_procyonoides.CAJHUB010000786.1                37777 0 +   3668941 C
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Neomonachus_schauinslandi.NINY01007774.1                4490035 0 -  14209539 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             6589 379 -      8794 I
e Myotis_myotis.MyoMyo_scaffold_6123                        13515 236 +     66751 I
e Myotis_lucifugus.GL429887.1                             3468272 238 -   3747815 I
e Myotis_davidii.KB114863.1                               5022194 233 +   6462685 I
e Myotis_brandtii.KE161952.1                               970769 237 +   8389877 I
e Mustela_putorius.JH417978.1                             4427878 0 -  28371801 C
e Murina_feae.MurFea_scaffold_2254                          23900 236 -    100666 I
e Mungos_mungo.MunMun_flattened_line_8729                  150028 0 -    168139 C
e Mormoops_blainvillei.MorMeg_scaffold_2952                162937 259 +    265003 I
e Mirounga_angustirostris.MirAng_flattened_line_8852        16636 0 -    104932 C
e Miniopterus_schreibersii.MinSch_scaffold_24116            36998 214 +     45743 I
e Miniopterus_natalensis.LDJU01000022.1                   8212509 213 +  10048721 I
e Micronycteris_hirsuta.MicHir_scaffold_37978               24387 274 -     32043 I
e Mellivora_capensis.MelCap_flattened_line_15433             6035 0 -     87323 C
e Lycaon_pictus.CM007556.1                               11094913 0 +  39895028 C
e Leptonychotes_weddellii.KB714749.1                      3091140 0 -   3498232 C
e Lasiurus_borealis.LasBor_scaffold_59542                    5042 241 +     26176 I
e Hyaena_hyaena.HyaHya_flattened_line_20729                 22947 0 -     67322 C
e Helogale_parvula.HelPar_flattened_line_22962              22347 0 +     53719 C
e Felis_nigripes.FelNig_flattened_line_8080                 26705 0 +     52776 C
e Felis_catus_fca126.CM031420.1                         129285610 0 - 158578461 C
e Enhydra_lutris.KZ291749.1                              85877148 0 +  99434291 C
e Elephantulus_edwardii.JH947210.1                        7830035 1277 +  15467074 I
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Echinops_telfairi.JH980316.1                           22999931 2 -  44670279 I
e Desmodus_rotundus.KZ672188.1                           18700517 262 -  18957592 I
e Dasypus_novemcinctus.JH568778.1                          185121 383 -   6883506 I
e Cryptoprocta_ferox.CryFer_flattened_line_19014            57206 0 -     70449 C
e Condylura_cristata.JH655880.1                          60621870 8 +  78930452 I
e Choloepus_hoffmanni.KN194586.1                           763329 503 +    964067 I
e Choloepus_didactylus.ChoDid_scaffold_36182                18024 504 -     21363 I
e Carollia_perspicillata.CarPer_scaffold_4436               61226 261 +     67245 I
e Canis_lupus_orion.HG994411.1                           16462242 0 -  44759192 C
e Canis_lupus_familiaris.chr31                           11095457 0 +  39895921 C
e Canis_lupus_dingo.QKWQ01001993.1                       11272746 0 -  35597290 C
e Canis_lupus_VD.CanFam_VD_scaffold_16982                   21037 0 +     87036 C
e CanFam4.chr31                                          11526063 0 +  39901454 C
e Artibeus_jamaicensis.ArtJam_scaffold_41619                10440 261 -     29036 I
e Anoura_caudifer.AnoCau_scaffold_422                      392020 257 -    631301 I
e Ailurus_fulgens.LNAC01000003.1                          7099694 0 -  16596857 C
e Ailuropoda_melanoleuca.LNAT01000321.1                  10662913 0 +  23371972 C
e Acinonyx_jubatus.LLWD01000356.1                         2039223 0 +   3721120 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           20903 21 -    119109 I
e Hylobates_pileatus_a.tarseq_592                             35773 13 -     60944 I
e Galeopterus_variegatus.GalVar_scaffold_354               159242 0 +    324696 C
e Xerus_inauris.XerIna_scaffold_7898                       128400 2868 -    134049 I
e Varecia_variegata.k141_775891                             28632 0 -     33872 C
e Varecia_rubra.k141_432109                                  9097 0 -     20643 C
e Trachypithecus_pileatus.k141_1022309                       5226 0 +     13828 C
e Trachypithecus_phayrei.ctg3                            44662914 0 -  44834318 C
e Trachypithecus_obscurus.k141_1115109                       8130 0 -     28054 C
e Trachypithecus_melamera.k141_699241                        2986 0 -     24393 C
e Trachypithecus_leucocephalus.k141_381681                   3005 0 +     12481 C
e Trachypithecus_laotum.k141_760702                          4719 0 +     14371 C
e Trachypithecus_hatinhensis.k141_504423                     6067 0 -     15592 C
e Trachypithecus_germaini.k141_868450                        3883 0 -     11566 C
e Trachypithecus_geei.k141_670367                           46082 0 -     54611 C
e Trachypithecus_francoisi.k141_768164                       4689 0 -     14244 C
e Trachypithecus_cristatus.k141_1011511                      5261 0 -     12939 C
e Trachypithecus_crepusculus.k141_1588528                   23360 0 -     32910 C
e Trachypithecus_auratus.k141_738098                        29800 0 +     38948 C
e Tarsius_wallacei.k141_48636                               64387 0 +     65473 C
e Tarsius_lariang.k141_609102                               31078 0 +     42269 C
e Semnopithecus_vetulus.k141_1143185                        16479 0 +     30600 C
e Semnopithecus_schistaceus.k141_387461                     33457 0 +     42640 C
e Semnopithecus_priam.k141_410937                           40312 0 +     46263 C
e Semnopithecus_johnii.k141_785014                         121532 0 +    130994 C
e Semnopithecus_hypoleucos.k141_761524                      11528 0 +     20762 C
e Semnopithecus_entellus.k141_1572367                        6153 0 +     15331 C
e Rhinopithecus_strykeri.ctg4                            44859307 0 -  45163003 C
e Rhinopithecus_bieti.k119_554384                            2917 0 -     17045 C
e Pygathrix_nigripes_a.k141_101123                             8537 0 +     18040 C
e Pygathrix_nigripes_b.ctg79                                 6809148 0 +   6970761 C
e Pygathrix_cinerea.k141_374971                             32651 0 +     56732 C
e Propithecus_verreauxi.k141_158021                         43097 0 -     48185 C
e Propithecus_tattersalli.k141_907138                       20833 0 -     53241 C
e Propithecus_perrieri.k141_7554                            21199 0 +     27322 C
e Propithecus_edwardsi.k141_1317105                         39276 0 -     44753 C
e Propithecus_diadema.k141_577245                           46889 0 +     52369 C
e Propithecus_coronatus.k141_1353159                         7541 0 +     11805 C
e Propithecus_coquerelli.NW_012147863.1                     21485 0 -     30946 C
e Prolemur_simus.MPIZ01000048.1                           6852455 0 +  12164890 C
e Presbytis_mitrata.k141_860013                              8661 0 +     14865 C
e Presbytis_comata.k141_672698                               8546 0 -     15069 C
e Pithecia_vanzolinii.k141_831006                           15424 0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514 0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521 0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292 0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093 0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038 0 +     78826 C
e Pithecia_albicans.k141_991845                             45662 0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000036.1               26743271 0 +  26888534 C
e Piliocolobus_kirkii.k141_929665                            4788 0 +      7694 C
e Piliocolobus_gordonorum.k141_1270531                       5421 0 -     17985 C
e Piliocolobus_badius.k141_1987485                           4802 0 -      5908 C
e Octodon_degus.JH651621.1                                3687420 1881 +  10294119 I
e Nasalis_larvatus.k141_153429                              11264 0 +     48152 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     91920 1922 -    117718 I
e Mirza_zaza.k141_593947                                     4826 1 -     12809 I
e Microcebus_murinus.CM007691.1                          16514144 0 +  47401472 C
e Lepilemur_septentrionalis.k141_710646                      2174 0 -     13103 C
e Lepilemur_ruficaudatus.k141_574529                        36128 0 -     38897 C
e Lepilemur_dorsalis.k141_134267                            57748 0 +     63517 C
e Lepilemur_ankaranensis.k141_884009                        28384 0 +     39228 C
e Lemur_catta.scaffold_1                                258411081 0 - 285822530 C
e Indri_indri.k141_2197838                                   1208 0 +      3484 C
e Hystrix_cristata.HysCri_scaffold_50788                     7688 1865 +     22540 I
e Hapalemur_occidentalis.k141_797938                        49409 0 -     54384 C
e Hapalemur_meridionalis.k141_186231                        32783 0 -     42470 C
e Hapalemur_griseus.k141_1387522                             9534 0 +     56096 C
e Hapalemur_gilberti.k141_279011                             4207 0 -     11661 C
e Hapalemur_alaotrensis.k141_1280836                         5729 0 +     10286 C
e Eulemur_sanfordi.k141_186399                              19736 0 -     29447 C
e Eulemur_rufus.k141_1620292                                36997 0 +     46535 C
e Eulemur_rubriventer.k141_411740                           22262 0 +     26808 C
e Eulemur_mongoz.k141_825972                                19806 0 +     27497 C
e Eulemur_macaco.k141_747087                                 3134 0 -     19505 C
e Eulemur_fulvus.k141_653297                                15149 0 +    109717 C
e Eulemur_flavifrons.k141_903901                            11666 0 +     60246 C
e Eulemur_coronatus.k141_3240342                            15341 0 +     36558 C
e Eulemur_collaris.k141_1015201                              2208 0 -      4292 C
e Eulemur_albifrons.k141_715837                              8945 0 +     13586 C
e Dolichotis_patagonum.DolPat_scaffold_14102                39606 21 -     73477 I
e Daubentonia_madagascariensis.ctg11                     16848791 0 +  31942871 C
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 32592 1717 -     67205 I
e Colobus_polykomos.k141_1406057                            19335 0 +     23629 C
e Colobus_guereza.LG08                                  147667351 0 + 156195979 C
e Colobus_angolensis.KN985967.1                          10889423 0 +  10971483 C
e Chinchilla_lanigera.JH721867.1                         15963245 964 +  43084221 I
e Cheirogaleus_medius.k141_133808                           11964 0 +     13308 C
e Cheirogaleus_major.k141_1157592                           62863 0 -     68416 C
e Cephalopachus_bancanus.k141_702587                        12225 0 +     21754 C
e Cavia_tschudii.CavTsc_scaffold_488                       177725 1742 +    436027 I
e Cavia_porcellus.DS562889.1                             15799553 1742 -  24440124 I
e Cavia_aperea.AVPZ01000278.1                            15787615 1741 -  24422027 I
e Carlito_syrichta.NW_007248099.1                          313221 0 +    345090 C
e Avahi_peyrierasi.k141_798820                               4252 0 +      6337 C
e Avahi_laniger.k141_2840928                                10636 0 -     16375 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               17241 18 +    209709 T-T--A--------G----------------------T-----------TA-----ATTAATGGAGA
s Acinonyx_jubatus.LLWD01000356.1                         2039223 11 +   3721120 --t--aa-aaa---c----------------------c-----------ta-----a----------
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    117445  8 -    189883 T-T--A--------T----------------------C-----------TT-----A----------
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10662913 10 +  23371972 --t--aa-aaa---c----------------------c-----------ta----------------
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7099694 10 -  16596857 --t--aa-aaa---c----------------------a-----------ta----------------
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   21417  8 -     22067 A-G--A--------G----------------------T-----------TT-----A----------
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   5103 18 -     60446 T-T--A--------C----------------------T-----------TA-----ATTAGTGGAGA
i Allenopithecus_nigroviridis.k141_2469532              C 0 I 4
s Allochrocebus_lhoesti.k141_3566948                         5820 18 -     29318 T-T--A--------C----------------------T-----------TA-----ATTAGTGGAGA
i Allochrocebus_lhoesti.k141_3566948                    C 0 I 4
s Allochrocebus_preussi.k141_1108977                         4758 18 +     38766 T-T--A--------C----------------------T-----------TA-----ATTAGTGGAGA
i Allochrocebus_preussi.k141_1108977                    C 0 I 4
s Allochrocebus_solatus.k141_371672                          5714 18 -     80423 T-T--A--------C----------------------T-----------TA-----ATTAGTGGAGA
i Allochrocebus_solatus.k141_371672                     C 0 I 4
s Alouatta_belzebul.k141_276091                               708  5 +     19852 --------------C----------------------T-----------TA-----A----------
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                2964  5 -     12443 --------------C----------------------T-----------TA-----A----------
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                              263  5 +      5070 --------------C----------------------T-----------TA-----A----------
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                    8  5 -      1641 --------------C----------------------T-----------TA-----A----------
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          2747  5 -     24210 --------------C----------------------T-----------TA-----A----------
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           29329  5 -     30219 --------------C----------------------T-----------TA-----A----------
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_405616                              5165  5 +     16794 --------------C----------------------T-----------TA-----A----------
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                             297  5 -      1470 --------------C----------------------T-----------TA-----A----------
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             4442  5 -      9835 --------------C----------------------T-----------TA-----A----------
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3525218  4 +   4113121 --------------c----------------------t-----------ta----------------
i Ammotragus_lervia.NIVO01013474.1                      I 5 I 1
s Antilocapra_americana.AntAmePen_scaffold_27338             2649  4 +     55446 --------------C----------------------T-----------TA----------------
i Antilocapra_americana.AntAmePen_scaffold_27338        I 5 I 1
s Aotus_azarae.k141_3170768                                 66055  5 +     78111 --------------C----------------------T-----------TA-----A----------
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            9001  5 +     22701 --------------C----------------------T-----------TA-----A----------
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5752959  5 +   9889416 --------------c----------------------t-----------ta-----a----------
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             9557  5 -    104377 --------------C----------------------T-----------TA-----A----------
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               9564  5 +     23246 --------------C----------------------T-----------TA-----A----------
i Aotus_vociferans.k141_718647                          C 0 C 0
s Arctocebus_calabarensis.k141_587554                        6156 10 +      9265 T-TACA--------A----------------------A-----------TT-----A----------
i Arctocebus_calabarensis.k141_587554                   C 0 I 4
s Ateles_geoffroyi_b.tarseq_2582                             9542850  5 +  39197703 --------------C----------------------T-----------TA-----A----------
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             64123  5 +     85812 --------------C----------------------T-----------TA-----A----------
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                15136  5 +     89302 --------------C----------------------T-----------TA-----A----------
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             19637  5 -     58268 --------------C----------------------T-----------TA-----A----------
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             67631  5 +    119057 --------------C----------------------T-----------TA-----A----------
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               9600  5 -     25888 --------------C----------------------T-----------TA-----A----------
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                10636  8 -     16375 T-T--T--------C----------------------T-----------TA-----A----------
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               4252  8 +      6337 T-T--T--------C----------------------T-----------TA-----A----------
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26383683  5 +  51448160 --------------c----------------------t-----------ta-----a----------
i Balaenoptera_acutorostrata.KI537095.1                 I 5 C 0
s Balaenoptera_bonaerensis.DF502048.1                        8856  5 -     13118 --------------c----------------------t-----------ta-----a----------
i Balaenoptera_bonaerensis.DF502048.1                   I 5 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   47680  4 -     72089 --------------C----------------------T-----------TA----------------
i Beatragus_hunteri.BeaHun_scaffold_21644               I 5 I 1
s Bison_bison.KN264915.1                                   301824  4 -   6870073 --------------c----------------------t-----------ta----------------
i Bison_bison.KN264915.1                                I 5 I 1
s Bos_indicus.CM003021.1                                 22955922  4 + 161108492 --------------c----------------------t-----------ta----------------
i Bos_indicus.CM003021.1                                I 5 I 1
s Bos_mutus.JH883513.1                                     418187  4 +    998990 --------------c----------------------t-----------ta----------------
i Bos_mutus.JH883513.1                                  I 5 I 1
s Bos_taurus.CM000177.6                                  22664576  4 + 158972876 --------------c----------------------t-----------ta----------------
i Bos_taurus.CM000177.6                                 I 5 I 1
s Bubalus_bubalis.KI419065.1                               674339  4 +   1914593 --------------c----------------------t-----------ta----------------
i Bubalus_bubalis.KI419065.1                            I 5 I 1
s Cacajao_ayresi.k141_724503                               117503  5 -    171031 --------------C----------------------T-----------TA-----A----------
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 16523  5 +    125063 --------------C----------------------T-----------TA-----A----------
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                18570  5 -    216513 --------------C----------------------T-----------TA-----A----------
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       11113  5 -    134917 --------------C----------------------T-----------TA-----A----------
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3222820  5 -   8989139 --------------c----------------------t-----------ta-----a----------
i Camelus_bactrianus.KN276303.1                         I 5 C 0
s Camelus_dromedarius.KN271192.1                           400522  5 -  15254737 --------------c----------------------t-----------ta-----a----------
i Camelus_dromedarius.KN271192.1                        I 5 C 0
s Camelus_ferus.KB016973.1                                2976258  5 +   6889770 --------------c----------------------t-----------ta-----a----------
i Camelus_ferus.KB016973.1                              I 5 C 0
s CanFam4.chr31                                          11526063 10 +  39901454 --t--aa-aa---gc----------------------c-----------tA----------------
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   21037 10 +     87036 --t--aa-aa---gc----------------------A-----------TA----------------
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11272746 10 -  35597290 --t--aa-aa---gc----------------------c-----------ta----------------
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11095457 10 +  39895921 --t--aa-aa---gc----------------------c-----------ta----------------
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16462242 10 -  44759192 --t--aa-aa---gc----------------------c-----------ta----------------
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21330298  4 + 157394656 --------------c----------------------t-----------ta----------------
i Capra_aegagrus.CM003214.1                             I 5 I 1
s Capra_hircus.CM004562.1                               135711515  4 - 157403528 --------------c----------------------t-----------ta----------------
i Capra_hircus.CM004562.1                               I 5 I 1
s Carlito_syrichta.NW_007248099.1                          313221  8 +    345090 t-t--t--------c----------------------t-----------tt-----a----------
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   162376  5 -    276539 --------------C----------------------T-----------TC-----A----------
i Catagonus_wagneri.CatWag_scaffold_1305                I 5 C 0
s Cavia_aperea.AVPZ01000278.1                            15789356  4 -  24422027 -------------------------------------N-----------NN-----N----------
i Cavia_aperea.AVPZ01000278.1                           I 1741 C 0
s Cavia_porcellus.DS562889.1                             15801295  4 -  24440124 -------------------------------------a-----------at-----a----------
i Cavia_porcellus.DS562889.1                            I 1742 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       179467  4 +    436027 -------------------------------------A-----------AT-----A----------
i Cavia_tschudii.CavTsc_scaffold_488                    I 1742 C 0
s Cebus_albifrons.Contig22                               18894335  5 -  29618158 --------------c----------------------t-----------ta-----a----------
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                11879  5 -     26817 --------------C----------------------T-----------TA-----A----------
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                16123  5 +     25043 --------------C----------------------T-----------TA-----A----------
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                        12225  8 +     21754 T-T--T--------C----------------------T-----------TT-----A----------
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4367252 10 +   7569818 -----aa----tttc----------------------t-----------ta-----a----------
i Ceratotherium_simum.JH767818.1                        I 1 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         7009 10 -      9338 -----A----ATTTC----------------------T-----------TA-----A----------
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    I 1 C 0
s Cercocebus_atys.KQ010443.1                              6559044 18 +   6739814 t-T--A--------C----------------------T-----------TA-----ATTAGTGGAGA
i Cercocebus_atys.KQ010443.1                            C 0 I 4
s Cercocebus_chrysogaster.k141_2328246                      30521 18 +     60454 T-T--A--------C----------------------T-----------TA-----ATTAGTGGAGA
i Cercocebus_chrysogaster.k141_2328246                  C 0 I 4
s Cercocebus_lunulatus.k141_4634644                          5725 18 -     21101 T-T--A--------C----------------------T-----------TA-----ATTAGTGGAGA
i Cercocebus_lunulatus.k141_4634644                     C 0 I 4
s Cercocebus_torquatus.k141_3969582                         63035 18 -    107033 T-T--A--------C----------------------T-----------TA-----ATTAGTGGAGA
i Cercocebus_torquatus.k141_3969582                     C 0 I 4
s Cercopithecus_ascanius.k141_4123525                        5896 18 -     17608 T-T--A--------G----------------------C-----------TA-----ATTAGTGAAGA
i Cercopithecus_ascanius.k141_4123525                   C 0 I 4
s Cercopithecus_cephus.k141_3893260                          3061 18 +     45019 T-T--A--------G----------------------C-----------TA-----ATTAGTGAAGA
i Cercopithecus_cephus.k141_3893260                     C 0 I 4
s Cercopithecus_diana.k141_2561715                           3123 18 +     15177 T-T--A--------C----------------------T-----------TA-----ATTAGTAGAGA
i Cercopithecus_diana.k141_2561715                      C 0 I 4
s Cercopithecus_hamlyni.k141_129805                          5945 18 +     16677 T-T--A--------C----------------------T-----------TA-----ATTAGTGGAGA
i Cercopithecus_hamlyni.k141_129805                     C 0 I 4
s Cercopithecus_lowei.k141_623764                           28133 18 +     35983 T-T--A--------G----------------------C-----------TA-----ATTAGTGAAGA
i Cercopithecus_lowei.k141_623764                       C 0 I 4
s Cercopithecus_albogularis.ctg51                              11994664 18 +  12117833 T-T--A--------G----------------------C-----------TA-----ATTAGTGAAGA
i Cercopithecus_albogularis.ctg51                             C 0 I 4
s Cercopithecus_mona.ctg12                               46481425 18 +  46592721 T-T--A--------C----------------------T-----------TA-----ATTAGTGGAGA
i Cercopithecus_mona.ctg12                              C 0 I 4
s Cercopithecus_neglectus.k141_2078027                      44976 18 -     45581 T-T--A--------C----------------------T-----------TA-----ATTAGTGGAGA
i Cercopithecus_neglectus.k141_2078027                  C 0 I 4
s Cercopithecus_nictitans.k141_1129315                       5957 18 +     35577 T-T--A--------G----------------------C-----------TA-----ATTAGTGAAGA
i Cercopithecus_nictitans.k141_1129315                  C 0 I 4
s Cercopithecus_petaurista.k141_64532                        5751 18 -     25661 T-T--A--------G----------------------C-----------TA-----ATTAGTGAAGA
i Cercopithecus_petaurista.k141_64532                   C 0 I 4
s Cercopithecus_pogonias.k141_3109732                        5709 18 -     17744 T-T--A--------C----------------------T-----------TA-----ATTAGTGGAGA
i Cercopithecus_pogonias.k141_3109732                   C 0 I 4
s Cercopithecus_roloway.k141_2263608                        25294 18 +     37128 T-T--A--------C----------------------T-----------TA-----ATTAGTAGAGA
i Cercopithecus_roloway.k141_2263608                    C 0 I 4
s Cheirogaleus_major.k141_1157592                           62863  8 -     68416 T-T--T--------C----------------------T-----------TA-----A----------
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                           11964  8 +     13308 T-T--T--------C----------------------T-----------TA-----A----------
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             9161  5 -     18223 --------------C----------------------T-----------TA-----A----------
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                               900  5 +    188999 --------------C----------------------T-----------TA-----A----------
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           45199  5 +     57117 --------------C----------------------T-----------TA-----A----------
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          49878  5 +     54541 --------------C----------------------T-----------TA-----A----------
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chiropotes_israelita.k141_1189915                         74682  5 +    196370 --------------C----------------------T-----------TA-----A----------
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          18863  5 +     40510 --------------C----------------------T-----------TA-----A----------
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15143479 18 -  15256731 T-T--A--------C----------------------T-----------TA-----ATTAGTGGAGA
i Chlorocebus_aethiops.ctg22                            C 0 I 4
s Chlorocebus_pygerythrus.k141_1486215                      37943 18 -     53260 T-T--A--------C----------------------T-----------TA-----ATTAGTGGAGA
i Chlorocebus_pygerythrus.k141_1486215                  C 0 I 4
s Chlorocebus_sabaeus.CM001963.2                        101148502 18 + 101219884 T-T--A--------C----------------------T-----------TA-----ATTAGTGGAGA
i Chlorocebus_sabaeus.CM001963.2                        C 0 I 4
s Chrysochloris_asiatica.ChrAsi_scaffold_629495              1905 12 -      3120 A-T--A----ATGTC----------------------T-----------TC-----A----------
i Chrysochloris_asiatica.ChrAsi_scaffold_629495         C 0 C 0
s Condylura_cristata.JH655880.1                          60621878 17 +  78930452 act--ta-a--tt-c----------------------t--------cTC-A---AAA----------
i Condylura_cristata.JH655880.1                         I 8 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         1428 12 -      5782 T-T--A----ATTTC----------------------T-----------TA-----G----------
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 282309  8 -    399297 T-T--A--------T----------------------C-----------TT-----A----------
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53034679  8 +  72327488 T-T--A--------T----------------------C-----------TT-----A----------
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              1305 12 -     22648 A-T--T----AATTC----------------------T-----------TA-----A----------
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            57206 11 -     70449 --t--aa-aaa---c----------------------c-----------tA-----A----------
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  213673  8 -    956709 A-A--A--------C----------------------T-----------CT-----T----------
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                20502 30 +     26546 A-T--A--------AAGGCTTTGTTTATTAAAAAAATC-----------TT-----T----------
i Cuniculus_paca.CunPac_flattened_line_16637            I 5 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             61666  4 -    236241 -------------------------------------C-----------TT-----T----------
i Dasyprocta_punctata.DasPun_flattened_line_634         I 31 C 0
s Daubentonia_madagascariensis.ctg11                     16848791  8 +  31942871 T-T--T--------C----------------------T-----------TA-----A----------
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80040308  5 -  96802777 --------------c----------------------t-----------ta-----a----------
i Delphinapterus_leucas.KZ290064.1                      I 5 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 325900 10 +    993696 -----aa----tttc----------------------t-----------ta-----a----------
i Dicerorhinus_sumatrensis.PEKH010003161.1              I 1 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   6541 10 +    151128 -----A----ATTTC----------------------T-----------TA-----A----------
i Diceros_bicornis.DicBicMic_scaffold_9545              I 1 C 0
s Dipodomys_ordii.KN672545.1                              3659461  8 +   4240102 a-a--a--------a----------------------t-----------aa-----a----------
i Dipodomys_ordii.KN672545.1                            C 0 I 1
s Dipodomys_stephensi.DipSte_scaffold_84338                  1819  8 -     11986 A-A--A--------A----------------------T-----------AA-----A----------
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 I 1
s Dolichotis_patagonum.DolPat_scaffold_14102                39627 12 -     73477 -------------------------------------A--AAAAAAAC-TT-----T----------
i Dolichotis_patagonum.DolPat_scaffold_14102            I 21 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1495896  4 +   1727528 --------------c----------------------t-----------ta----------------
i Elaphurus_davidianus.JRFZ01086400.1                   I 5 I 1
s Ellobius_lutescens.LOEQ01003611.1                        243483  8 -    369425 T-T--A--------T----------------------C-----------TT-----A----------
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01198462.1                           1225  8 -      1901 T-T--A--------T----------------------C-----------TT-----A----------
i Ellobius_talpinus.LOJH01198462.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85877148 10 +  99434291 --t--aa-aaa---c----------------------a-----------cg----------------
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Equus_asinus.JREZ01000062.1                             5856267 10 -   7175178 -----aa-a--tt-c----------------------t-----------ta-----a----------
i Equus_asinus.JREZ01000062.1                           I 1 C 0
s Equus_caballus.CM000402.2                              13354767 10 +  41866177 -----aa-a--tt-c----------------------t-----------ta-----a----------
i Equus_caballus.CM000402.2                             I 1 C 0
s Equus_przewalskii.ATBW01073585.1                          16257 10 +     92910 -----aa-a--tt-c----------------------t-----------ta-----a----------
i Equus_przewalskii.ATBW01073585.1                      I 1 C 0
s Erinaceus_europaeus.JH835290.1                         11540726 11 +  16010500 a-a--aa----tgaa----------------------t-----------tt----------------
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48780512 18 -  48907691 T-T--A--------C----------------------T-----------TA-----ATTAGTGGAGA
i Erythrocebus_patas.Contig8                            C 0 I 4
s Eschrichtius_robustus.EscRob_flattened_line_685          318526  5 +    330699 --------------C----------------------T-----------TA-----A----------
i Eschrichtius_robustus.EscRob_flattened_line_685       I 5 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             64983  5 +     89355 --------------C----------------------T-----------TA-----A----------
i Eubalaena_japonica.EubJap_flattened_line_7756         I 5 C 0
s Eulemur_albifrons.k141_715837                              8945  8 +     13586 T-T--T--------C----------------------T-----------TA-----A----------
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_1015201                              2208  8 -      4292 T-T--T--------C----------------------T-----------TA-----A----------
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            15341  8 +     36558 T-T--T--------C----------------------T-----------TA-----A----------
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            11666  8 +     60246 T-T--T--------C----------------------T-----------TA-----A----------
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                15149  8 +    109717 T-T--T--------C----------------------T-----------TA-----A----------
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 3134  8 -     19505 T-T--T--------C----------------------T-----------TA-----A----------
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                19806  8 +     27497 T-T--T--------C----------------------T-----------TA-----A----------
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           22262  8 +     26808 T-T--T--------C----------------------T-----------TA-----A----------
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                36997  8 +     46535 T-T--T--------C----------------------T-----------TA-----A----------
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              19736  8 -     29447 T-T--T--------C----------------------T-----------TA-----A----------
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129898642 11 - 159252932 --t--aa-aaa---c----------------------c-----------ta-----a----------
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129285610 11 - 158578461 --t--aa-aaa---c----------------------c-----------ta-----a----------
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 26705 11 +     52776 --t--aa-aaa---c----------------------c-----------tA-----A----------
i Felis_nigripes.FelNig_flattened_line_8080             C 0 I 4
s Fukomys_damarensis.KN123630.1                          13895787 28 -  19261668 A-T--G--------AAGGC-----------tttgtttaaaagaaatcc-tT----------------
i Fukomys_damarensis.KN123630.1                         I 5 C 0
s Galago_moholi.ctg555                                     214999  8 -    847004 T-T--G--------A----------------------A-----------TT-----A----------
i Galago_moholi.ctg555                                  C 0 I 3
s Galago_senegalensis.k141_964197                           17360  8 -     43889 T-T--G--------A----------------------A-----------TT-----A----------
i Galago_senegalensis.k141_964197                       C 0 I 3
s Galagoides_demidoff.k141_1769638                          14504  8 +     27357 T-T--A--------A----------------------A-----------TT-----A----------
i Galagoides_demidoff.k141_1769638                      C 0 I 3
s Galeopterus_variegatus.GalVar_scaffold_354               159242  8 +    324696 T-T--T--------C----------------------T-----------TA-----A----------
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    185694  4 -    189561 --------------c----------------------t-----------ta----------------
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 5 I 1
s Glis_glis.GliGli_scaffold_79770                           16008  8 -     18683 a-a--a--------a----------------------t-----------at-----a----------
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               8956 11 -     14630 T-T--A--------C----------------------T-----------TA-----ATTA-------
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119656056 11 - 195582420 t-t--a--------c----------------------t-----------ta-----atta-------
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   79399  8 +    118900 a-a--a--------a----------------------a-----------at-----a----------
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         5729  8 +     10286 T-T--A--------C----------------------T-----------TA-----A----------
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             4207  8 -     11661 T-T--A--------C----------------------T-----------TA-----A----------
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             9534  8 +     56096 T-T--A--------C----------------------T-----------TA-----A----------
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        32783  8 -     42470 T-T--A--------C----------------------T-----------TA-----A----------
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        49409  8 -     54384 T-T--A--------C----------------------T-----------TA-----A----------
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              22347 11 +     53719 --t--aa-aaa---c----------------------c-----------tA-----A----------
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                32568  4 -     91191 --------------C----------------------T-----------TA----------------
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 5 I 1
s Heterocephalus_glaber.JH602058.1                        2560307 27 +  31725842 A-T--A--------AAGGCTTT-T----------cttaaaa-a-ctct-tt-----a----------
i Heterocephalus_glaber.JH602058.1                      I 5 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               62543 12 +     73687 A-A--A----ATTAC----------------------T-----------TA-----A----------
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              150306  5 +    277961 --------------C----------------------T-----------TA-----A----------
i Hippopotamus_amphibius.HipAmp_scaffold_1308           I 5 C 0
s Hipposideros_armiger.JXIK01001085.1                      282704 12 -    477199 t-a--ca----tttc----------------------t-----------ta-----a----------
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959                473 12 +     26078 T-A--C----ATTTC----------------------T-----------TA-----A----------
i Hipposideros_galeritus.HipGal_scaffold_52959          C 0 C 0
s Hoolock_leuconedys.ctg649                                   108590 18 +    115816 T-T--A--------C----------------------T-----------TA-----ATTAATGGAGA
i Hoolock_leuconedys.ctg649                                I 80 I 128
s Hyaena_hyaena.HyaHya_flattened_line_20729                 22947 11 -     67322 --t--aa-aaa---c----------------------A-----------TA-----A----------
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           20924  3 -    119109 -------------------------------------------------TT-----T----------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       I 21 C 0
s Hylobates_abbotti.k141_1816750                             1418 18 +      3202 T-T--A--------C----------------------T-----------TA-----ATTAATGAAGA
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1633646                              1388 18 -      2102 T-T--A--------C----------------------T-----------TA-----ATTAATGGAGA
i Hylobates_agilis.k141_1633646                         C 0 C 0
s Hylobates_klossii.k141_468230                              2905 18 +      5464 T-T--A--------C----------------------T-----------TA-----ATTAATGGAGA
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14628253 18 -  25970782 T-T--A--------C----------------------T-----------TA-----ATTAATGGAGA
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                             804 18 +      4161 T-T--A--------C----------------------T-----------TA-----ATTAATGGAGA
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             35786  4 -     60944 ----------------------------------------------------------tttt-----
i Hylobates_pileatus_a.tarseq_592                         I 13 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7129921  6 +  13083262 -----t--------a----------------------t-----------at-----a----------
i Ictidomys_tridecemlineatus.JH393315.1                 I 62 C 0
s Indri_indri.k141_2197838                                   1208  8 +      3484 T-T--T--------C----------------------T-----------TA-----A----------
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              12520  5 +     17520 --------------C----------------------T-----------TA-----A----------
i Inia_geoffrensis.IniGeo_flattened_line_66725          I 5 C 0
s Jaculus_jaculus.JH725517.1                              8577101  8 +  11848649 A-C--A--------G----------------------C-----------TT-----A----------
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               27107  5 +     37189 --------------T----------------------T-----------AA-----A----------
i Kogia_breviceps.KogBre_flattened_line_35920           I 5 C 0
s Lagothrix_lagothricha.k141_12968                          53719  5 -    147782 --------------C----------------------T-----------TA-----A----------
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lemur_catta.scaffold_1                                258411081  8 - 285822530 C-T--T--------C----------------------T-----------TA-----A----------
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        28384  8 +     39228 T-T--T--------C----------------------T-----------TA-----A----------
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            57748  8 +     63517 T-T--T--------C----------------------T-----------TA-----A----------
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        36128  8 -     38897 T-T--T--------C----------------------T-----------TA-----A----------
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      2174  8 -     13103 T-T--T--------C----------------------T-----------TA-----A----------
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3091140 10 -   3498232 --t--aa-aaa---c----------------------c-----------ta----------------
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    18440  7 +     22452 --a--a--------a----------------------t-----------ta-----a----------
i Lepus_americanus.LepAme_scaffold_62849                I 1 C 0
s Lipotes_vexillifer.KE558548.1                            139472  5 +   3060487 --------------c----------------------t-----------ta-----a----------
i Lipotes_vexillifer.KE558548.1                         I 5 C 0
s Lophocebus_aterrimus.ctg55                             19252132 18 +  19376315 T-T--A--------C----------------------T-----------TA-----ATTAGTGGAGA
i Lophocebus_aterrimus.ctg55                            C 0 I 4
s Loris_lydekkerianus.k141_550999                           14939 10 +     84689 T-TAAA--------A----------------------A-----------TT-----A----------
i Loris_lydekkerianus.k141_550999                       C 0 I 4
s Loris_tardigradus.ctg97                                 3782678 10 +   6799190 T-TAAA--------A----------------------A-----------TT-----A----------
i Loris_tardigradus.ctg97                               C 0 I 4
s Loxodonta_africana.GL010040.1                          20598458 12 -  62548349 a-a--aa-aa-t--c----------------------t-----------ta-----a----------
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11094913 10 +  39895028 --t--aa-aa---gc----------------------c-----------ta----------------
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             23883 18 +     74745 T-T--A--------C----------------------T-----------TA-----ATTAGTGGAGA
i Macaca_arctoides.k141_2201161                         C 0 I 4
s Macaca_assamensis.Contig65                             12710344 18 +  12821369 T-T--A--------C----------------------T-----------TA-----ATTAGTGGAGA
i Macaca_assamensis.Contig65                            C 0 I 4
s Macaca_cyclopis.k119_883699                                2918 18 -     26467 T-T--A--------C----------------------T-----------TA-----ATTAGTGGAGA
i Macaca_cyclopis.k119_883699                           C 0 I 4
s Macaca_fascicularis.k141_155037                           50789 18 +     63263 T-T--A--------C----------------------T-----------TA-----ATTAGTGGAGA
i Macaca_fascicularis.k141_155037                       C 0 I 4
s Macaca_fuscata.k119_938422                                 2899 18 -     26361 T-T--A--------C----------------------T-----------TA-----ATTAGTGGAGA
i Macaca_fuscata.k119_938422                            C 0 I 4
s Macaca_leonina.k141_467472                                 6089 18 -      7381 T-T--A--------C----------------------T-----------TA-----ATTAGTGGAGA
i Macaca_leonina.k141_467472                            C 0 I 4
s Macaca_maura.k141_251854                                  49318 18 -     79256 T-T--A--------C----------------------T-----------TA-----ATTAGTGGAGA
i Macaca_maura.k141_251854                              C 0 I 4
s Macaca_mulatta.NC_041755.1                            196039416 18 + 196197964 t-T--A--------C----------------------T-----------TA-----ATTAGTGGAGA
i Macaca_mulatta.NC_041755.1                            C 0 I 4
s Macaca_nemestrina.KQ004885.1                           11449586 18 +  11645122 t-T--A--------C----------------------T-----------TA-----ATTAGTGGAGA
i Macaca_nemestrina.KQ004885.1                          C 0 I 4
s Macaca_nigra.k141_282495                                   8272 18 -     46448 T-T--A--------C----------------------T-----------TA-----ATTAGTGGAGA
i Macaca_nigra.k141_282495                              C 0 I 4
s Macaca_radiata.k141_3680256                                5934 18 -     13212 T-T--A--------C----------------------T-----------TA-----ATTAGTGGAGA
i Macaca_radiata.k141_3680256                           C 0 I 4
s Macaca_siberu.k141_741907                                 19615 18 -     55006 T-T--A--------C----------------------T-----------TA-----ATTAGTGGAGA
i Macaca_siberu.k141_741907                             C 0 I 4
s Macaca_silenus.Contig12                                43844730 18 +  43892939 T-T--A--------C----------------------T-----------TA-----ATTAGTGGAGA
i Macaca_silenus.Contig12                               C 0 I 4
s Macaca_thibetana.k99_662710                               20898 18 -     24607 T-T--A--------C----------------------T-----------TA-----ATTAGTGGAGA
i Macaca_thibetana.k99_662710                           C 0 I 4
s Macaca_tonkeana.k141_2870633                               8269 18 -     27140 T-T--A--------C----------------------T-----------TA-----ATTAGTGGAGA
i Macaca_tonkeana.k141_2870633                          C 0 I 4
s Mandrillus_leucophaeus.scaffold125                     43441305 18 -  43563597 T-T--A--------C----------------------T-----------TA-----ATTAGTGGAGA
i Mandrillus_leucophaeus.scaffold125                    C 0 I 4
s Mandrillus_sphinx.Contig144                             4454109 18 -   4543643 T-T--A--------C----------------------T-----------TA-----ATTAGTGGAGA
i Mandrillus_sphinx.Contig144                           C 0 I 4
s Manis_javanica.JSZB01003966.1                            149320 15 +    252755 t-t--ta-aaatttc----------------------t-----------ta-----a----------
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             39468 15 +     58827 t-t--ta-aaacttc----------------------t-----------ta-----a----------
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36877790  6 +  64221397 -----t--------a----------------------t-----------at-----a----------
i Marmota_marmota.CZRN01000005.1                        I 66 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       65116 10 -    234502 -----A----ATTTC----------------------T-----------TA-----A----------
i Megaderma_lyra.MegLyr_scaffold_3562                   I 1 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             6035 10 -     87323 --t--aa-aaa---c----------------------A-----------CA----------------
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               15582  8 +     15977 T-T--A--------T----------------------C-----------TT-----A----------
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1051204  8 -  26018355 T-C--A--------T----------------------C-----------TT-----A----------
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    2109  5 -     12939 --------------C----------------------T-----------TA-----A----------
i Mesoplodon_bidens.MesBid_scaffold_96348               I 5 C 0
s Microcebus_murinus.CM007691.1                          16514144  8 +  47401472 t-t--t--------c----------------------t-----------ta-----a----------
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  41170 13 -     48017 A-T--A---CATTTC----------------------T-----------TT-----A----------
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22823893  8 -  98408828 T-T--A--------T----------------------C-----------TT-----A----------
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         5851 18 +     29742 T-T--A--------C----------------------T-----------TA-----ATTAGTGGAGA
i Miopithecus_ogouensis.k141_2935907                    C 0 I 4
s Mirounga_angustirostris.MirAng_flattened_line_8852        16636 10 -    104932 --t--aa-aaa---c----------------------c-----------tA----------------
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     4827  7 -     12809 --T--T--------C----------------------T-----------TA-----A----------
i Mirza_zaza.k141_593947                                I 1 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 149901  5 +    154973 --------------C----------------------T-----------TA-----A----------
i Monodon_monoceros.MonMon_M_scaffold_5598              I 5 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  5914  4 -     19904 --------------C----------------------T-----------TA----------------
i Moschus_moschiferus.MosMos_scaffold_78805             I 5 I 1
s Mungos_mungo.MunMun_flattened_line_8729                  150028 11 -    168139 --t--aa-aaa---c----------------------c-----------tA-----A----------
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Mus_caroli.LT608236.1                                  70771509  8 +  92629107 T-T--a--------t----------------------c-----------tt-----a----------
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75493562  8 +  98207768 T-T--A--------t----------------------c-----------tt-----a----------
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67559939  8 +  89017189 T-T--A--------T----------------------C-----------TT-----A----------
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74336289  8 +  97876770 T-T--a--------t----------------------c-----------tt-----a----------
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             14546  8 +     98495 a-a--a--------a----------------------t-----------at-----a----------
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4427878 10 -  28371801 --t--aa-aaa---t----------------------a-----------ca----------------
i Mustela_putorius.JH417978.1                           C 0 C 0
s Nannospalax_galili.KL201303.1                            119879  8 +    362372 t-t--a--------t----------------------t-----------tt-----a----------
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4490035 10 -  14209539 --t--aa-aaa---c----------------------c-----------ta----------------
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3954492  5 -   4490290 --------------c----------------------t-----------ta-----a----------
i Neophocaena_asiaeorientalis.KZ688543.1                I 5 C 0
s Nomascus_annamensis.k141_1817463                            544 18 -      1070 T-T--A--------C----------------------T-----------TA-----ATTAATGGAGA
i Nomascus_annamensis.k141_1817463                      C 0 C 0
s Nomascus_concolor.k141_70405                                544 18 +      1153 T-T--A--------C----------------------T-----------TA-----ATTAATGGAGA
i Nomascus_concolor.k141_70405                          C 0 C 0
s Nomascus_gabriellae.k141_1400361                            479 18 -      2203 T-T--A--------C----------------------T-----------TA-----ATTGATGGAGA
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_1022                             498 18 -     11638 T-T--A--------C----------------------T-----------TA-----ATTAATGGAGA
i Nomascus_siki_b.tarseq_1022                       C 0 I 2
s Nomascus_siki_a.k141_1035055                                 3130 18 -      3602 T-T--A--------C----------------------T-----------TA-----ATTAATGGAGA
i Nomascus_siki_a.k141_1035055                            I 7 I 2
s Nyctereutes_procyonoides.CAJHUB010000786.1                37777 10 +   3668941 --t--aa-aaa---c----------------------c-----------ta----------------
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65571508 10 -  95554990 T-TAAA--------A----------------------A-----------TT-----A----------
i Nycticebus_bengalensis.LG16                           C 0 I 4
s Nycticebus_coucang.k141_771591                            14917 10 +     16181 T-TAAA--------A----------------------A-----------TT-----A----------
i Nycticebus_coucang.k141_771591                        C 0 I 4
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65679719 10 +  89412551 t-taaa--------a----------------------a-----------tt-----a----------
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 I 4
s Odobenus_rosmarus.KB229369.1                             684737 10 -   3126709 --t--aa-aaa---c----------------------c-----------ta----------------
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1083346  4 +   1425656 --------------a----------------------g-----------ta----------------
i Odocoileus_virginianus.KZ101650.1                     I 5 I 1
s Okapia_johnstoni.LVCL01S0017931.1                         41429  4 +     78940 --------------c----------------------t-----------ta----------------
i Okapia_johnstoni.LVCL01S0017931.1                     I 5 I 1
s Ondatra_zibethicus.OndZib_scaffold_6821                  130083  8 +    145789 T-T--A--------T----------------------C-----------TT-----A----------
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  42768  8 +     62360 T-T--A--------T----------------------C-----------TT-----A----------
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7228168  5 -   7562323 --------------c----------------------t-----------ta-----a----------
i Orcinus_orca.KB316965.1                               I 5 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              63941 12 -     66828 A-G--A----AATCC----------------------T-----------AA-----A----------
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141881458  8 + 163896628 a-a--a--------a----------------------t-----------ta-----a----------
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      314916 10 -    505867 --t--aa-aaa---c----------------------c-----------ta----------------
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        4860  8 -     53940 T-T--G--------A----------------------A-----------TT-----A----------
i Otolemur_crassicaudatus.k141_505435                   C 0 I 3
s Otolemur_garnettii.GL873528.1                          18012833  8 -  38779656 t-t--g--------a----------------------a-----------tt-----a----------
i Otolemur_garnettii.GL873528.1                         C 0 I 3
s Ovis_aries.CM001582.2                                 134082358  4 - 275406953 --------------c----------------------t-----------ta----------------
i Ovis_aries.CM001582.2                                 I 5 I 1
s Ovis_canadensis.OviCan_scaffold_6251                      83586  4 +    140051 --------------C----------------------T-----------TA----------------
i Ovis_canadensis.OviCan_scaffold_6251                  I 5 I 1
s Pan_paniscus.CM003386.1                               127578214 18 - 205426864 T-T--A--------C----------------------T-----------TA-----ATTAATGGAGA
i Pan_paniscus.CM003386.1                               C 0 I 4
s Pan_troglodytes.CM009241.2                            120155374 18 - 196562556 T-T--A--------C----------------------T-----------TA-----ATTAATGGAGA
i Pan_troglodytes.CM009241.2                            C 0 I 4
s Panthera_onca.PanOnc_flattened_line_1615                  39633 11 +    295523 --t--aa-aaa---c----------------------C-----------TA-----A----------
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3643448 11 +  18214204 --t--aa-aaa---c----------------------c-----------ta-----a----------
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5033096 11 -   6340057 --t--aa-aaa---c----------------------c-----------ta-----a----------
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1071227  4 -   1292953 --------------c----------------------t-----------ta----------------
i Pantholops_hodgsonii.KE114631.1                       I 5 I 1
s Papio_anubis.CM001492.2                               188160094 18 - 188283584 t-T--A--------C----------------------T-----------TA-----ATTAGTGGAGA
i Papio_anubis.CM001492.2                               C 0 I 4
s Papio_cynocephalus.k141_45376                              3184 18 +     25005 T-T--A--------C----------------------T-----------TA-----ATTAGTGGAGA
i Papio_cynocephalus.k141_45376                         C 0 I 4
s Papio_hamadryas.Contig15                               47517466 18 +  47705337 T-T--A--------C----------------------T-----------TA-----ATTAGTGGAGA
i Papio_hamadryas.Contig15                              C 0 I 4
s Papio_kindae.k141_5458022                                 71457 18 -    104429 T-T--A--------C----------------------T-----------TA-----ATTAGTGGAGA
i Papio_kindae.k141_5458022                             C 0 I 4
s Papio_papio.k141_979496                                    9989 18 +     14967 T-T--A--------C----------------------T-----------TA-----ATTAGTGGAGA
i Papio_papio.k141_979496                               C 0 I 4
s Papio_ursinus.k141_1345919                                 5854 18 -      7628 T-T--A--------C----------------------T-----------TA-----ATTAGTGGAGA
i Papio_ursinus.k141_1345919                            C 0 I 4
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    121124 11 -    135482 --t--aa-aaa---T----------------------C-----------TA-----A----------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          10527 10 -     23713 T-TACA--------A----------------------A-----------TT-----A----------
i Perodicticus_ibeanus.k141_117958                      C 0 I 4
s Perodicticus_potto.k141_1136815                           11667 10 +     61070 T-TACA--------A----------------------A-----------TT-----A----------
i Perodicticus_potto.k141_1136815                       C 0 I 4
s Perognathus_longimembris.PerPac_flattened_line_19359       1664  8 +     49596 A-A--A--------A----------------------T-----------AA-----A----------
i Perognathus_longimembris.PerPac_flattened_line_19359  I 10 I 1
s Peromyscus_maniculatus.KI615518.1                       4955137  8 -   8017169 T-T--A--------T----------------------C-----------TT-----A----------
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    16974 22 -     36578 A-T--A--------AA--ATTT-TT-GT---------A-----------TTTCTAAT----------
i Petromus_typicus.PetTyp_scaffold_33007                I 5 I 9
s Phocoena_phocoena.PhoPho_flattened_line_53071              2633  5 +      8220 --------------C----------------------T-----------TA-----A----------
i Phocoena_phocoena.PhoPho_flattened_line_53071         I 5 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           9104  5 +     21690 --------------C----------------------T-----------TA-----A----------
i Platanista_gangetica.PlaMin_flattened_line_72990      I 5 C 0
s Plecturocebus_bernhardi.k141_959214                       25810  5 +     44506 --------------C----------------------T-----------TA-----A----------
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        26023  5 +     67491 --------------C----------------------T-----------TA-----A----------
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      16262  5 -     98129 --------------C----------------------T-----------TA-----A----------
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     25862  5 +    147771 --------------C----------------------T-----------TA-----A----------
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         2498  5 -     43940 --------------C----------------------T-----------TA-----A----------
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          6581  5 -     55515 --------------C----------------------T-----------TA-----A----------
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         25935  5 +    152463 --------------C----------------------T-----------TA-----A----------
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       3743  5 -    119457 --------------C----------------------T-----------TA-----A----------
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         15658  5 +    134592 --------------C----------------------T-----------TA-----A----------
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          26245  5 -     75465 --------------C----------------------T-----------TA-----A----------
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              190837 18 -    373494 T-T--A--------C----------------------T-----------TA-----ATTAATGGAGA
i Pongo_abelii.NDHI03003816.1                           C 0 I 4
s Pongo_pygmaeus.ctg62                                   19811484 18 +  19899266 T-T--A--------C----------------------T-----------TA-----ATTAATGGAGA
i Pongo_pygmaeus.ctg62                                  C 0 I 4
s Procavia_capensis.ProCapCap_scaffold_149274                3649 12 -      9567 A-A--A----ATTAC----------------------T-----------TA-----A----------
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6852455  8 +  12164890 t-t--t--------c----------------------t-----------ta-----a----------
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     21485  8 -     30946 t-t--t--------c----------------------t-----------ta-----a----------
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         7541  8 +     11805 T-T--T--------C----------------------T-----------TA-----A----------
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           46889  8 +     52369 T-T--T--------C----------------------T-----------TA-----A----------
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         39276  8 -     44753 T-T--T--------C----------------------T-----------TA-----A----------
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            21199  8 +     27322 T-T--T--------C----------------------T-----------TA-----A----------
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       20833  8 -     53241 T-T--T--------C----------------------T-----------TA-----A----------
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         43097  8 -     48185 T-T--T--------C----------------------T-----------TA-----A----------
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           37933  8 +     77221 t-t--a--------t----------------------c-----------tt-----a----------
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        249999 10 -    344369 --t--aa-aaa---c----------------------A-----------CA----------------
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Puma_concolor.QAVW01000427.1                          131539744 11 - 161321710 --t--aa-aaa---c----------------------c-----------ta-----a----------
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                20210  4 +     68503 --------------A----------------------T-----------TA----------------
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 5 I 1
s Rattus_norvegicus.chr11                                13917348  8 +  90463843 T-T--a--------t----------------------c-----------tt-----a----------
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1792304 12 +   2252614 t-t--aa----tttc----------------------t-----------ta-----a----------
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_1069354                      206  4 -       709 --------------C----------------------T-----------TA----------------
i Saiga_tatarica.SaiTat_scaffold_1069354                I 5 I 1
s Saimiri_boliviensis.NW_024100938.1                     15676268  5 -  43202129 --------------c----------------------t-----------ga-----a----------
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        8181  5 +     34089 --------------C----------------------T-----------GA-----A----------
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              8121  5 -     60842 --------------C----------------------T-----------GA-----A----------
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              8215  5 +     67014 --------------C----------------------T-----------GA-----A----------
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              8192  5 +     60816 --------------C----------------------T-----------GA-----A----------
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 8129  5 -     76454 --------------C----------------------T-----------GA-----A----------
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17344916  5 -  30362882 --------------C----------------------T-----------TA-----A----------
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         24237  5 -     62485 --------------C----------------------T-----------TA-----A----------
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   39333 17 -    114521 ACT--G----AATTC----------------------T-------CTC--A---AAA----------
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  104701  8 -    120886 T-T--A--------T----------------------C-----------TT-----A----------
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            23271 12 +    739146 A-A--A----ATATC----------------------T-----------TA-----A----------
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17769724 15 -  27805282 a-t--tttaaatt-c----------------------t-----------ta-----a----------
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             238521 10 -    276980 --t--aa-aaa---t----------------------a-----------ta----------------
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            32686 11 +     62062 --t--aa-aaa---c----------------------c-----------tA-----A----------
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        18512 17 -  13920577 --T--A--------C----------------------T-----------TA-----ATTAATGGAGA
i Symphalangus_syndactylus.tarseq_24                    I 1 C 0
s Tapirus_indicus.TapInd_scaffold_176                      810490 10 +   1148477 -----A----ATTTC----------------------T-----------TA-----A----------
i Tapirus_indicus.TapInd_scaffold_176                   I 1 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  61132 10 +     99546 -----A----ATTTC----------------------T-----------TA-----A----------
i Tapirus_terrestris.TapTer_scaffold_14939              I 1 C 0
s Tarsius_lariang.k141_609102                               31078  8 +     42269 T-T--T--------C----------------------T-----------TT-----A----------
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               64387  8 +     65473 T-T--T--------C----------------------T-----------TT-----A----------
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194011627 18 - 194193292 t-T--A--------C----------------------T-----------TA-----ATTAGTGGAGA
i Theropithecus_gelada.CM009951.1                       C 0 I 4
s Tragulus_javanicus.TraJav_scaffold_14717                   9247  2 +     90398 --------------C----------------------T-----------------------------
i Tragulus_javanicus.TraJav_scaffold_14717              I 5 C 0
s Trichechus_manatus.JH594618.1                          16089535 12 +  31416278 a-a--aa----tttc----------------------t-----------ta-----a----------
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2797468  8 -   3938065 t-t--t--------t----------------------t-----------tt-----a----------
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    9402  8 +     13056 A-T--T--------T----------------------T-----------TT-----A----------
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69316897  5 -  96451834 --------------c----------------------t-----------ta-----a----------
i Tursiops_truncatus.MRVK01000923.1                     I 5 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   9869 20 +     10241 ACT--G----AATTC----------------------T-----ACCAC-TA---AAA----------
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6520211 10 +  28682327 --t--aa-aaa---c----------------------c-----------ta----------------
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  9097  8 -     20643 T-T--T--------C----------------------T-----------TA-----A----------
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             28632  8 -     33872 T-T--T--------C----------------------T-----------TA-----A----------
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1527930  5 -   2331223 --------------c----------------------t-----------ta-----a----------
i Vicugna_pacos.KN269600.1                              I 5 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                144143 10 -    281493 --t--aa-aaa---c----------------------c-----------tA----------------
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        219589 10 -    227762 --t--aa-aaa---c----------------------c-----------ta----------------
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_64392                     20232  7 -     20485 --G--A--------G----------------------C-----------TT-----A----------
i Zapus_hudsonius.ZapHud_scaffold_64392                 I 1 N 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            1642  4 -     13665 -------------------------------------t-----------ta-----A----------
i Ziphius_cavirostris.ZipCav_flattened_line_60625       I 5 C 0
e Eptesicus_fuscus.JH977687.1                             4708429 237 +   6522550 I
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Dinomys_branickii.DinBra_scaffold_1996                   158442 1030 +    228994 I
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           4051 456 -      6963 I
e Ochotona_princeps.JH802095.1                            4996729 2205 -  23139505 I
e Tonatia_saurophila.TonSau_scaffold_3334                  137563 275 -    259118 I
e Tamandua_tetradactyla.TamTet_scaffold_26877               16259 379 +     45698 I
e Tadarida_brasiliensis.TadBra_scaffold_61492                1822 242 +     20549 I
e Sus_scrofa.CM000824.4                                 189273670 1086 + 218635234 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Pteronotus_parnellii.KE867983.1                            5588 252 -     27784 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             6589 379 -      8794 I
e Myotis_myotis.MyoMyo_scaffold_6123                        13515 236 +     66751 I
e Myotis_lucifugus.GL429887.1                             3468272 238 -   3747815 I
e Myotis_davidii.KB114863.1                               5022194 233 +   6462685 I
e Myotis_brandtii.KE161952.1                               970769 237 +   8389877 I
e Murina_feae.MurFea_scaffold_2254                          23900 236 -    100666 I
e Mormoops_blainvillei.MorMeg_scaffold_2952                162937 259 +    265003 I
e Miniopterus_schreibersii.MinSch_scaffold_24116            36998 214 +     45743 I
e Miniopterus_natalensis.LDJU01000022.1                   8212509 213 +  10048721 I
e Micronycteris_hirsuta.MicHir_scaffold_37978               24387 274 -     32043 I
e Lasiurus_borealis.LasBor_scaffold_59542                    5042 241 +     26176 I
e Elephantulus_edwardii.JH947210.1                        7830035 1277 +  15467074 I
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Echinops_telfairi.JH980316.1                           22999931  2 -  44670279 I
e Desmodus_rotundus.KZ672188.1                           18700517 262 -  18957592 I
e Dasypus_novemcinctus.JH568778.1                          185121 383 -   6883506 I
e Choloepus_hoffmanni.KN194586.1                           763329 503 +    964067 I
e Choloepus_didactylus.ChoDid_scaffold_36182                18024 504 -     21363 I
e Carollia_perspicillata.CarPer_scaffold_4436               61226 261 +     67245 I
e Artibeus_jamaicensis.ArtJam_scaffold_41619                10440 261 -     29036 I
e Anoura_caudifer.AnoCau_scaffold_422                      392020 257 -    631301 I
e Xerus_inauris.XerIna_scaffold_7898                       128400 2868 -    134049 I
e Trachypithecus_pileatus.k141_1022309                       5226  0 +     13828 C
e Trachypithecus_phayrei.ctg3                            44662914  0 -  44834318 C
e Trachypithecus_obscurus.k141_1115109                       8130  0 -     28054 C
e Trachypithecus_melamera.k141_699241                        2986  0 -     24393 C
e Trachypithecus_leucocephalus.k141_381681                   3005  0 +     12481 C
e Trachypithecus_laotum.k141_760702                          4719  0 +     14371 C
e Trachypithecus_hatinhensis.k141_504423                     6067  0 -     15592 C
e Trachypithecus_germaini.k141_868450                        3883  0 -     11566 C
e Trachypithecus_geei.k141_670367                           46082  0 -     54611 C
e Trachypithecus_francoisi.k141_768164                       4689  0 -     14244 C
e Trachypithecus_cristatus.k141_1011511                      5261  0 -     12939 C
e Trachypithecus_crepusculus.k141_1588528                   23360  0 -     32910 C
e Trachypithecus_auratus.k141_738098                        29800  0 +     38948 C
e Spermophilus_dauricus.KZ294190.1                        2243740 32 +   2842873 I
e Semnopithecus_vetulus.k141_1143185                        16479  0 +     30600 C
e Semnopithecus_schistaceus.k141_387461                     33457  0 +     42640 C
e Semnopithecus_priam.k141_410937                           40312  0 +     46263 C
e Semnopithecus_johnii.k141_785014                         121532  0 +    130994 C
e Semnopithecus_hypoleucos.k141_761524                      11528  0 +     20762 C
e Semnopithecus_entellus.k141_1572367                        6153  0 +     15331 C
e Rhinopithecus_strykeri.ctg4                            44859307  0 -  45163003 C
e Rhinopithecus_bieti.k119_554384                            2917  0 -     17045 C
e Pygathrix_nigripes_a.k141_101123                             8537  0 +     18040 C
e Pygathrix_nigripes_b.ctg79                                 6809148  0 +   6970761 C
e Pygathrix_cinerea.k141_374971                             32651  0 +     56732 C
e Presbytis_mitrata.k141_860013                              8661  0 +     14865 C
e Presbytis_comata.k141_672698                               8546  0 -     15069 C
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000036.1               26743271  0 +  26888534 C
e Piliocolobus_kirkii.k141_929665                            4788  0 +      7694 C
e Piliocolobus_gordonorum.k141_1270531                       5421  0 -     17985 C
e Piliocolobus_badius.k141_1987485                           4802  0 -      5908 C
e Octodon_degus.JH651621.1                                3687420 1881 +  10294119 I
e Nasalis_larvatus.k141_153429                              11264  0 +     48152 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     91920 1922 -    117718 I
e Hystrix_cristata.HysCri_scaffold_50788                     7688 1865 +     22540 I
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 32592 1717 -     67205 I
e Colobus_polykomos.k141_1406057                            19335  0 +     23629 C
e Colobus_guereza.LG08                                  147667351  0 + 156195979 C
e Colobus_angolensis.KN985967.1                          10889423  0 +  10971483 C
e Chinchilla_lanigera.JH721867.1                         15963245 964 +  43084221 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               17259 2 +    209709 T------A
s Allenopithecus_nigroviridis.k141_2469532                   5125 2 -     60446 T------A
i Allenopithecus_nigroviridis.k141_2469532              I 4 C 0
s Allochrocebus_lhoesti.k141_3566948                         5842 2 -     29318 T------A
i Allochrocebus_lhoesti.k141_3566948                    I 4 C 0
s Allochrocebus_preussi.k141_1108977                         4780 2 +     38766 T------A
i Allochrocebus_preussi.k141_1108977                    I 4 C 0
s Allochrocebus_solatus.k141_371672                          5736 2 -     80423 T------A
i Allochrocebus_solatus.k141_371672                     I 4 C 0
s Cercocebus_atys.KQ010443.1                              6559066 2 +   6739814 T------A
i Cercocebus_atys.KQ010443.1                            I 4 C 0
s Cercocebus_chrysogaster.k141_2328246                      30543 2 +     60454 T------A
i Cercocebus_chrysogaster.k141_2328246                  I 4 C 0
s Cercocebus_lunulatus.k141_4634644                          5747 2 -     21101 T------A
i Cercocebus_lunulatus.k141_4634644                     I 4 C 0
s Cercocebus_torquatus.k141_3969582                         63057 2 -    107033 T------A
i Cercocebus_torquatus.k141_3969582                     I 4 C 0
s Cercopithecus_ascanius.k141_4123525                        5918 2 -     17608 T------A
i Cercopithecus_ascanius.k141_4123525                   I 4 C 0
s Cercopithecus_cephus.k141_3893260                          3083 2 +     45019 T------A
i Cercopithecus_cephus.k141_3893260                     I 4 C 0
s Cercopithecus_diana.k141_2561715                           3145 2 +     15177 T------A
i Cercopithecus_diana.k141_2561715                      I 4 C 0
s Cercopithecus_hamlyni.k141_129805                          5967 2 +     16677 T------A
i Cercopithecus_hamlyni.k141_129805                     I 4 C 0
s Cercopithecus_lowei.k141_623764                           28155 2 +     35983 T------A
i Cercopithecus_lowei.k141_623764                       I 4 C 0
s Cercopithecus_albogularis.ctg51                              11994686 2 +  12117833 T------A
i Cercopithecus_albogularis.ctg51                             I 4 C 0
s Cercopithecus_mona.ctg12                               46481447 2 +  46592721 T------A
i Cercopithecus_mona.ctg12                              I 4 C 0
s Cercopithecus_neglectus.k141_2078027                      44998 2 -     45581 T------A
i Cercopithecus_neglectus.k141_2078027                  I 4 C 0
s Cercopithecus_nictitans.k141_1129315                       5979 2 +     35577 T------A
i Cercopithecus_nictitans.k141_1129315                  I 4 C 0
s Cercopithecus_petaurista.k141_64532                        5773 2 -     25661 T------A
i Cercopithecus_petaurista.k141_64532                   I 4 C 0
s Cercopithecus_pogonias.k141_3109732                        5731 2 -     17744 T------A
i Cercopithecus_pogonias.k141_3109732                   I 4 C 0
s Cercopithecus_roloway.k141_2263608                        25316 2 +     37128 T------A
i Cercopithecus_roloway.k141_2263608                    I 4 C 0
s Chlorocebus_aethiops.ctg22                             15143501 2 -  15256731 T------A
i Chlorocebus_aethiops.ctg22                            I 4 C 0
s Chlorocebus_pygerythrus.k141_1486215                      37965 2 -     53260 T------A
i Chlorocebus_pygerythrus.k141_1486215                  I 4 C 0
s Chlorocebus_sabaeus.CM001963.2                        101148524 2 + 101219884 T------A
i Chlorocebus_sabaeus.CM001963.2                        I 4 C 0
s Erythrocebus_patas.Contig8                             48780534 2 -  48907691 T------A
i Erythrocebus_patas.Contig8                            I 4 C 0
s Hoolock_leuconedys.ctg315                                   349955 2 +    431944 T------A
i Hoolock_leuconedys.ctg315                                I 14 C 0
s Hylobates_abbotti.k141_1816750                             1436 2 +      3202 T------A
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1633646                              1406 2 -      2102 T------A
i Hylobates_agilis.k141_1633646                         C 0 C 0
s Hylobates_klossii.k141_468230                              2923 2 +      5464 T------A
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14628271 2 -  25970782 T------A
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                             822 2 +      4161 T------A
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Lophocebus_aterrimus.ctg55                             19252154 2 +  19376315 T------A
i Lophocebus_aterrimus.ctg55                            I 4 C 0
s Macaca_arctoides.k141_2201161                             23905 2 +     74745 T------A
i Macaca_arctoides.k141_2201161                         I 4 C 0
s Macaca_assamensis.Contig65                             12710366 2 +  12821369 T------A
i Macaca_assamensis.Contig65                            I 4 C 0
s Macaca_cyclopis.k119_883699                                2940 2 -     26467 T------A
i Macaca_cyclopis.k119_883699                           I 4 C 0
s Macaca_fascicularis.k141_155037                           50811 2 +     63263 T------A
i Macaca_fascicularis.k141_155037                       I 4 C 0
s Macaca_fuscata.k119_938422                                 2921 2 -     26361 T------A
i Macaca_fuscata.k119_938422                            I 4 C 0
s Macaca_leonina.k141_467472                                 6111 2 -      7381 T------A
i Macaca_leonina.k141_467472                            I 4 C 0
s Macaca_maura.k141_251854                                  49340 2 -     79256 T------A
i Macaca_maura.k141_251854                              I 4 C 0
s Macaca_mulatta.NC_041755.1                            196039438 2 + 196197964 T------A
i Macaca_mulatta.NC_041755.1                            I 4 C 0
s Macaca_nemestrina.KQ004885.1                           11449608 2 +  11645122 T------A
i Macaca_nemestrina.KQ004885.1                          I 4 C 0
s Macaca_nigra.k141_282495                                   8294 2 -     46448 T------A
i Macaca_nigra.k141_282495                              I 4 C 0
s Macaca_radiata.k141_3680256                                5956 2 -     13212 T------A
i Macaca_radiata.k141_3680256                           I 4 C 0
s Macaca_siberu.k141_741907                                 19637 2 -     55006 T------A
i Macaca_siberu.k141_741907                             I 4 C 0
s Macaca_silenus.Contig12                                43844752 2 +  43892939 T------A
i Macaca_silenus.Contig12                               I 4 C 0
s Macaca_thibetana.k99_662710                               20920 2 -     24607 T------A
i Macaca_thibetana.k99_662710                           I 4 C 0
s Macaca_tonkeana.k141_2870633                               8291 2 -     27140 T------A
i Macaca_tonkeana.k141_2870633                          I 4 C 0
s Mandrillus_leucophaeus.scaffold125                     43441327 2 -  43563597 T------A
i Mandrillus_leucophaeus.scaffold125                    I 4 C 0
s Mandrillus_sphinx.Contig144                             4454131 2 -   4543643 T------A
i Mandrillus_sphinx.Contig144                           I 4 C 0
s Miopithecus_ogouensis.k141_2935907                         5873 2 +     29742 T------A
i Miopithecus_ogouensis.k141_2935907                    I 4 C 0
s Nomascus_annamensis.k141_1817463                            562 2 -      1070 T------A
i Nomascus_annamensis.k141_1817463                      C 0 C 0
s Nomascus_concolor.k141_70405                                562 2 +      1153 T------A
i Nomascus_concolor.k141_70405                          C 0 C 0
s Nomascus_gabriellae.k141_1400361                            497 2 -      2203 T------A
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_2639                            8256 8 -     20157 TGGAGATA
i Nomascus_siki_b.tarseq_2639                       n 2 I 1614
s Nomascus_siki_a.k141_421408                                   406 2 +     16235 T------A
i Nomascus_siki_a.k141_421408                             I 18 I 11
s Pan_paniscus.CM003386.1                               127578236 2 - 205426864 T------A
i Pan_paniscus.CM003386.1                               I 4 C 0
s Pan_troglodytes.CM009241.2                            120155396 2 - 196562556 T------A
i Pan_troglodytes.CM009241.2                            I 4 C 0
s Papio_anubis.CM001492.2                               188160116 2 - 188283584 T------A
i Papio_anubis.CM001492.2                               I 4 C 0
s Papio_cynocephalus.k141_45376                              3206 2 +     25005 T------A
i Papio_cynocephalus.k141_45376                         I 4 C 0
s Papio_hamadryas.Contig15                               47517488 2 +  47705337 T------A
i Papio_hamadryas.Contig15                              I 4 C 0
s Papio_kindae.k141_5458022                                 71479 2 -    104429 T------A
i Papio_kindae.k141_5458022                             I 4 C 0
s Papio_papio.k141_979496                                   10011 2 +     14967 T------A
i Papio_papio.k141_979496                               I 4 C 0
s Papio_ursinus.k141_1345919                                 5876 2 -      7628 T------A
i Papio_ursinus.k141_1345919                            I 4 C 0
s Pongo_abelii.NDHI03003816.1                              190859 2 -    373494 T------A
i Pongo_abelii.NDHI03003816.1                           I 4 C 0
s Pongo_pygmaeus.ctg62                                   19811506 2 +  19899266 T------A
i Pongo_pygmaeus.ctg62                                  I 4 C 0
s Symphalangus_syndactylus.tarseq_24                        18529 2 -  13920577 T------A
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Theropithecus_gelada.CM009951.1                       194011649 2 - 194193292 T------A
i Theropithecus_gelada.CM009951.1                       I 4 C 0
e Eptesicus_fuscus.JH977687.1                             4708429 237 +   6522550 I
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Petromus_typicus.PetTyp_scaffold_33007                    16996 9 -     36578 I
e Sorex_araneus.JH798170.1                               17769739 0 -  27805282 C
e Dinomys_branickii.DinBra_scaffold_1996                   158442 1030 +    228994 I
e Erinaceus_europaeus.JH835290.1                         11540737 0 +  16010500 C
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           4051 456 -      6963 I
e Oryctolagus_cuniculus.CM000803.1                      141881466 0 + 163896628 C
e Ochotona_princeps.JH802095.1                            4996729 2205 -  23139505 I
e Lepus_americanus.LepAme_scaffold_62849                    18447 0 +     22452 C
e Perognathus_longimembris.PerPac_flattened_line_19359       1672 1 +     49596 I
e Dipodomys_stephensi.DipSte_scaffold_84338                  1827 1 -     11986 I
e Dipodomys_ordii.KN672545.1                              3659469 1 +   4240102 I
e Suricata_suricatta.SurSur_flattened_line_20339            32697 0 +     62062 C
e Chrysochloris_asiatica.ChrAsi_scaffold_629495              1917 0 -      3120 C
e Ziphius_cavirostris.ZipCav_flattened_line_60625            1646 0 -     13665 C
e Zalophus_californianus.ZalCal_flattened_line_4097        219599 0 -    227762 C
e Vulpes_lagopus.VulLag_flattened_line_2045                144153 0 -    281493 C
e Vicugna_pacos.KN269600.1                                1527935 0 -   2331223 C
e Ursus_maritimus.KK498671.1                              6520221 0 +  28682327 C
e Uropsilus_gracilis.UroGra_scaffold_69449                   9889 0 +     10241 C
e Tursiops_truncatus.MRVK01000923.1                      69316902 0 -  96451834 C
e Trichechus_manatus.JH594618.1                          16089547 0 +  31416278 C
e Tragulus_javanicus.TraJav_scaffold_14717                   9249 0 +     90398 C
e Tonatia_saurophila.TonSau_scaffold_3334                  137563 275 -    259118 I
e Tapirus_terrestris.TapTer_scaffold_14939                  61142 0 +     99546 C
e Tapirus_indicus.TapInd_scaffold_176                      810500 0 +   1148477 C
e Tamandua_tetradactyla.TamTet_scaffold_26877               16259 379 +     45698 I
e Tadarida_brasiliensis.TadBra_scaffold_61492                1822 242 +     20549 I
e Sus_scrofa.CM000824.4                                 189273670 1086 + 218635234 I
e Spilogale_gracilis.SpiGra_flattened_line_905             238531 0 -    276980 C
e Solenodon_paradoxus.SolPar_flattened_line_1012            23283 0 +    739146 C
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   39350 0 -    114521 C
e Saiga_tatarica.SaiTat_scaffold_1069354                      210 1 -       709 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Rhinolophus_sinicus.LVEH01000179.1                      1792316 0 +   2252614 C
e Rangifer_tarandus.RanTarSib_scaffold_24239                20214 1 +     68503 I
e Puma_concolor.QAVW01000427.1                          131539755 0 - 161321710 C
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Pteronura_brasiliensis.PteBra_flattened_line_1343        250009 0 -    344369 C
e Pteronotus_parnellii.KE867983.1                            5588 252 -     27784 I
e Procavia_capensis.ProCapCap_scaffold_149274                3661 0 -      9567 C
e Platanista_gangetica.PlaMin_flattened_line_72990           9109 0 +     21690 C
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Phocoena_phocoena.PhoPho_flattened_line_53071              2638 0 +      8220 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    121135 0 -    135482 C
e Pantholops_hodgsonii.KE114631.1                         1071231 1 -   1292953 I
e Panthera_tigris.KE721879.1                              5033107 0 -   6340057 C
e Panthera_pardus.KV860323.1                              3643459 0 +  18214204 C
e Panthera_onca.PanOnc_flattened_line_1615                  39644 0 +    295523 C
e Ovis_canadensis.OviCan_scaffold_6251                      83590 1 +    140051 I
e Ovis_aries.CM001582.2                                 134082362 1 - 275406953 I
e Otocyon_megalotis.JAEUCK010005121.1                      314926 0 -    505867 C
e Orycteropus_afer.OryAfe_flattened_line_13509              63953 0 -     66828 C
e Orcinus_orca.KB316965.1                                 7228173 0 -   7562323 C
e Okapia_johnstoni.LVCL01S0017931.1                         41433 1 +     78940 I
e Odocoileus_virginianus.KZ101650.1                       1083350 1 +   1425656 I
e Odobenus_rosmarus.KB229369.1                             684747 0 -   3126709 C
e Nyctereutes_procyonoides.CAJHUB010000786.1                37787 0 +   3668941 C
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Neophocaena_asiaeorientalis.KZ688543.1                  3954497 0 -   4490290 C
e Neomonachus_schauinslandi.NINY01007774.1                4490045 0 -  14209539 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             6589 379 -      8794 I
e Myotis_myotis.MyoMyo_scaffold_6123                        13515 236 +     66751 I
e Myotis_lucifugus.GL429887.1                             3468272 238 -   3747815 I
e Myotis_davidii.KB114863.1                               5022194 233 +   6462685 I
e Myotis_brandtii.KE161952.1                               970769 237 +   8389877 I
e Mustela_putorius.JH417978.1                             4427888 0 -  28371801 C
e Murina_feae.MurFea_scaffold_2254                          23900 236 -    100666 I
e Mungos_mungo.MunMun_flattened_line_8729                  150039 0 -    168139 C
e Moschus_moschiferus.MosMos_scaffold_78805                  5918 1 -     19904 I
e Mormoops_blainvillei.MorMeg_scaffold_2952                162937 259 +    265003 I
e Monodon_monoceros.MonMon_M_scaffold_5598                 149906 0 +    154973 C
e Mirounga_angustirostris.MirAng_flattened_line_8852        16646 0 -    104932 C
e Miniopterus_schreibersii.MinSch_scaffold_24116            36998 214 +     45743 I
e Miniopterus_natalensis.LDJU01000022.1                   8212509 213 +  10048721 I
e Micronycteris_hirsuta.MicHir_scaffold_37978               24387 274 -     32043 I
e Microgale_talazaci.MicTal_scaffold_34660                  41183 0 -     48017 C
e Mesoplodon_bidens.MesBid_scaffold_96348                    2114 0 -     12939 C
e Mellivora_capensis.MelCap_flattened_line_15433             6045 0 -     87323 C
e Megaderma_lyra.MegLyr_scaffold_3562                       65126 0 -    234502 C
e Manis_pentadactyla.KN017078.1                             39483 0 +     58827 C
e Manis_javanica.JSZB01003966.1                            149335 0 +    252755 C
e Lycaon_pictus.CM007556.1                               11094923 0 +  39895028 C
e Loxodonta_africana.GL010040.1                          20598470 0 -  62548349 C
e Lipotes_vexillifer.KE558548.1                            139477 0 +   3060487 C
e Leptonychotes_weddellii.KB714749.1                      3091150 0 -   3498232 C
e Lasiurus_borealis.LasBor_scaffold_59542                    5042 241 +     26176 I
e Kogia_breviceps.KogBre_flattened_line_35920               27112 0 +     37189 C
e Inia_geoffrensis.IniGeo_flattened_line_66725              12525 0 +     17520 C
e Hyaena_hyaena.HyaHya_flattened_line_20729                 22958 0 -     67322 C
e Hipposideros_galeritus.HipGal_scaffold_52959                485 0 +     26078 C
e Hipposideros_armiger.JXIK01001085.1                      282716 0 -    477199 C
e Hippopotamus_amphibius.HipAmp_scaffold_1308              150311 0 +    277961 C
e Heterohyrax_brucei.HetBruBak_scaffold_25354               62555 0 +     73687 C
e Hemitragus_hylocrius.HemHyl_scaffold_16669                32572 1 -     91191 I
e Helogale_parvula.HelPar_flattened_line_22962              22358 0 +     53719 C
e Giraffa_tippelskirchi.LVKQ01S012154.1                    185698 1 -    189561 I
e Felis_nigripes.FelNig_flattened_line_8080                 26716 4 +     52776 I
e Felis_catus_fca126.CM031420.1                         129285621 0 - 158578461 C
e Eubalaena_japonica.EubJap_flattened_line_7756             64988 0 +     89355 C
e Eschrichtius_robustus.EscRob_flattened_line_685          318531 0 +    330699 C
e Equus_przewalskii.ATBW01073585.1                          16267 0 +     92910 C
e Equus_caballus.CM000402.2                              13354777 0 +  41866177 C
e Equus_asinus.JREZ01000062.1                             5856277 0 -   7175178 C
e Enhydra_lutris.KZ291749.1                              85877158 0 +  99434291 C
e Elephantulus_edwardii.JH947210.1                        7830035 1277 +  15467074 I
e Elaphurus_davidianus.JRFZ01086400.1                     1495900 1 +   1727528 I
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Echinops_telfairi.JH980316.1                           22999931 2 -  44670279 I
e Diceros_bicornis.DicBicMic_scaffold_9545                   6551 0 +    151128 C
e Dicerorhinus_sumatrensis.PEKH010003161.1                 325910 0 +    993696 C
e Desmodus_rotundus.KZ672188.1                           18700517 262 -  18957592 I
e Delphinapterus_leucas.KZ290064.1                       80040313 0 -  96802777 C
e Dasypus_novemcinctus.JH568778.1                          185121 383 -   6883506 I
e Cryptoprocta_ferox.CryFer_flattened_line_19014            57217 0 -     70449 C
e Crocidura_indochinensis.CroInd_scaffold_27484              1317 0 -     22648 C
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         1440 0 -      5782 C
e Condylura_cristata.JH655880.1                          60621895 0 +  78930452 C
e Choloepus_hoffmanni.KN194586.1                           763329 503 +    964067 I
e Choloepus_didactylus.ChoDid_scaffold_36182                18024 504 -     21363 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_160623         7019 0 -      9338 C
e Catagonus_wagneri.CatWag_scaffold_1305                   162381 0 -    276539 C
e Carollia_perspicillata.CarPer_scaffold_4436               61226 261 +     67245 I
e Capra_hircus.CM004562.1                               135711519 1 - 157403528 I
e Capra_aegagrus.CM003214.1                              21330302 1 + 157394656 I
e Canis_lupus_orion.HG994411.1                           16462252 0 -  44759192 C
e Canis_lupus_familiaris.chr31                           11095467 0 +  39895921 C
e Canis_lupus_dingo.QKWQ01001993.1                       11272756 0 -  35597290 C
e Canis_lupus_VD.CanFam_VD_scaffold_16982                   21047 0 +     87036 C
e CanFam4.chr31                                          11526073 0 +  39901454 C
e Camelus_ferus.KB016973.1                                2976263 0 +   6889770 C
e Camelus_dromedarius.KN271192.1                           400527 0 -  15254737 C
e Camelus_bactrianus.KN276303.1                           3222825 0 -   8989139 C
e Bubalus_bubalis.KI419065.1                               674343 1 +   1914593 I
e Bos_taurus.CM000177.6                                  22664580 1 + 158972876 I
e Bos_mutus.JH883513.1                                     418191 1 +    998990 I
e Bos_indicus.CM003021.1                                 22955926 1 + 161108492 I
e Bison_bison.KN264915.1                                   301828 1 -   6870073 I
e Beatragus_hunteri.BeaHun_scaffold_21644                   47684 1 -     72089 I
e Balaenoptera_bonaerensis.DF502048.1                        8861 0 -     13118 C
e Balaenoptera_acutorostrata.KI537095.1                  26383688 0 +  51448160 C
e Artibeus_jamaicensis.ArtJam_scaffold_41619                10440 261 -     29036 I
e Antilocapra_americana.AntAmePen_scaffold_27338             2653 1 +     55446 I
e Anoura_caudifer.AnoCau_scaffold_422                      392020 257 -    631301 I
e Ammotragus_lervia.NIVO01013474.1                        3525222 1 +   4113121 I
e Ailurus_fulgens.LNAC01000003.1                          7099704 0 -  16596857 C
e Ailuropoda_melanoleuca.LNAT01000321.1                  10662923 0 +  23371972 C
e Acinonyx_jubatus.LLWD01000356.1                         2039234 0 +   3721120 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           20927 0 -    119109 C
e Glis_glis.GliGli_scaffold_79770                           16016 0 -     18683 C
e Jaculus_jaculus.JH725517.1                              8577109 0 +  11848649 C
e Hylobates_pileatus_a.tarseq_592                             35790 0 -     60944 C
e Allactaga_bullata.AllBul_scaffold_70162                   21425 0 -     22067 C
e Galeopterus_variegatus.GalVar_scaffold_354               159250 0 +    324696 C
e Microtus_ochrogaster.CM001673.1                        22823901 0 -  98408828 C
e Xerus_inauris.XerIna_scaffold_7898                       128400 2868 -    134049 I
e Varecia_variegata.k141_775891                             28640 0 -     33872 C
e Varecia_rubra.k141_432109                                  9105 0 -     20643 C
e Tupaia_tana.TupTan_flattened_line_68454                    9410 0 +     13056 C
e Tupaia_chinensis.KB320831.1                             2797476 0 -   3938065 C
e Trachypithecus_pileatus.k141_1022309                       5226 0 +     13828 C
e Trachypithecus_phayrei.ctg3                            44662914 0 -  44834318 C
e Trachypithecus_obscurus.k141_1115109                       8130 0 -     28054 C
e Trachypithecus_melamera.k141_699241                        2986 0 -     24393 C
e Trachypithecus_leucocephalus.k141_381681                   3005 0 +     12481 C
e Trachypithecus_laotum.k141_760702                          4719 0 +     14371 C
e Trachypithecus_hatinhensis.k141_504423                     6067 0 -     15592 C
e Trachypithecus_germaini.k141_868450                        3883 0 -     11566 C
e Trachypithecus_geei.k141_670367                           46082 0 -     54611 C
e Trachypithecus_francoisi.k141_768164                       4689 0 -     14244 C
e Trachypithecus_cristatus.k141_1011511                      5261 0 -     12939 C
e Trachypithecus_crepusculus.k141_1588528                   23360 0 -     32910 C
e Trachypithecus_auratus.k141_738098                        29800 0 +     38948 C
e Tarsius_wallacei.k141_48636                               64395 0 +     65473 C
e Tarsius_lariang.k141_609102                               31086 0 +     42269 C
e Spermophilus_dauricus.KZ294190.1                        2243740 32 +   2842873 I
e Sigmodon_hispidus.SigHis_scaffold_11332                  104709 0 -    120886 C
e Semnopithecus_vetulus.k141_1143185                        16479 0 +     30600 C
e Semnopithecus_schistaceus.k141_387461                     33457 0 +     42640 C
e Semnopithecus_priam.k141_410937                           40312 0 +     46263 C
e Semnopithecus_johnii.k141_785014                         121532 0 +    130994 C
e Semnopithecus_hypoleucos.k141_761524                      11528 0 +     20762 C
e Semnopithecus_entellus.k141_1572367                        6153 0 +     15331 C
e Sapajus_macrocephalus.k141_966464                         24242 0 -     62485 C
e Sapajus_apella.ctg10                                   17344921 0 -  30362882 C
e Saimiri_ustus.k141_1282476                                 8134 0 -     76454 C
e Saimiri_sciureus.k141_1947592                              8197 0 +     60816 C
e Saimiri_oerstedii.k141_841116                              8220 0 +     67014 C
e Saimiri_macrodon.k141_2087127                              8126 0 -     60842 C
e Saimiri_cassiquiarensis.k141_808270                        8186 0 +     34089 C
e Saimiri_boliviensis.NW_024100938.1                     15676273 0 -  43202129 C
e Rhinopithecus_strykeri.ctg4                            44859307 0 -  45163003 C
e Rhinopithecus_bieti.k119_554384                            2917 0 -     17045 C
e Rattus_norvegicus.chr11                                13917356 0 +  90463843 C
e Pygathrix_nigripes_a.k141_101123                             8537 0 +     18040 C
e Pygathrix_nigripes_b.ctg79                                 6809148 0 +   6970761 C
e Pygathrix_cinerea.k141_374971                             32651 0 +     56732 C
e Psammomys_obesus.NESX01026517.1                           37941 0 +     77221 C
e Propithecus_verreauxi.k141_158021                         43105 0 -     48185 C
e Propithecus_tattersalli.k141_907138                       20841 0 -     53241 C
e Propithecus_perrieri.k141_7554                            21207 0 +     27322 C
e Propithecus_edwardsi.k141_1317105                         39284 0 -     44753 C
e Propithecus_diadema.k141_577245                           46897 0 +     52369 C
e Propithecus_coronatus.k141_1353159                         7549 0 +     11805 C
e Propithecus_coquerelli.NW_012147863.1                     21493 0 -     30946 C
e Prolemur_simus.MPIZ01000048.1                           6852463 0 +  12164890 C
e Presbytis_mitrata.k141_860013                              8661 0 +     14865 C
e Presbytis_comata.k141_672698                               8546 0 -     15069 C
e Plecturocebus_moloch.k141_890597                          26250 0 -     75465 C
e Plecturocebus_miltoni.k141_841561                         15663 0 +    134592 C
e Plecturocebus_hoffmannsi.k141_985533                       3748 0 -    119457 C
e Plecturocebus_grovesi.k141_242819                         25940 0 +    152463 C
e Plecturocebus_dubius.k141_3565563                          6586 0 -     55515 C
e Plecturocebus_cupreus.k141_1145860                         2503 0 -     43940 C
e Plecturocebus_cinerascens.k141_744510                     25867 0 +    147771 C
e Plecturocebus_caligatus.k141_2539816                      16267 0 -     98129 C
e Plecturocebus_brunneus.k141_498086                        26028 0 +     67491 C
e Plecturocebus_bernhardi.k141_959214                       25815 0 +     44506 C
e Pithecia_vanzolinii.k141_831006                           15424 0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514 0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521 0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292 0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093 0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038 0 +     78826 C
e Pithecia_albicans.k141_991845                             45662 0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000036.1               26743271 0 +  26888534 C
e Piliocolobus_kirkii.k141_929665                            4788 0 +      7694 C
e Piliocolobus_gordonorum.k141_1270531                       5421 0 -     17985 C
e Piliocolobus_badius.k141_1987485                           4802 0 -      5908 C
e Peromyscus_maniculatus.KI615518.1                       4955145 0 -   8017169 C
e Perodicticus_potto.k141_1136815                           11677 4 +     61070 I
e Perodicticus_ibeanus.k141_117958                          10537 4 -     23713 I
e Otolemur_garnettii.GL873528.1                          18012841 3 -  38779656 I
e Otolemur_crassicaudatus.k141_505435                        4868 3 -     53940 I
e Onychomys_torridus.OnyTor_scaffold_12578                  42776 0 +     62360 C
e Ondatra_zibethicus.OndZib_scaffold_6821                  130091 0 +    145789 C
e Octodon_degus.JH651621.1                                3687420 1881 +  10294119 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65679729 4 +  89412551 I
e Nycticebus_coucang.k141_771591                            14927 4 +     16181 I
e Nycticebus_bengalensis.LG16                            65571518 4 -  95554990 I
e Nasalis_larvatus.k141_153429                              11264 0 +     48152 C
e Nannospalax_galili.KL201303.1                            119887 0 +    362372 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     91920 1922 -    117718 I
e Muscardinus_avellanarius.MusAve_scaffold_9643             14554 0 +     98495 C
e Mus_spretus.CM004110.1                                 74336297 0 +  97876770 C
e Mus_pahari.LT608305.1                                  67559947 0 +  89017189 C
e Mus_musculus.chr16                                     75493570 0 +  98207768 C
e Mus_caroli.LT608236.1                                  70771517 0 +  92629107 C
e Mirza_zaza.k141_593947                                     4834 0 -     12809 C
e Microcebus_murinus.CM007691.1                          16514152 0 +  47401472 C
e Mesocricetus_auratus.KB708139.1                         1051212 0 -  26018355 C
e Meriones_unguiculatus.MerUng_scaffold_52233               15590 0 +     15977 C
e Marmota_marmota.CZRN01000005.1                         36877796 0 +  64221397 C
e Loris_tardigradus.ctg97                                 3782688 4 +   6799190 I
e Loris_lydekkerianus.k141_550999                           14949 4 +     84689 I
e Lepilemur_septentrionalis.k141_710646                      2182 0 -     13103 C
e Lepilemur_ruficaudatus.k141_574529                        36136 0 -     38897 C
e Lepilemur_dorsalis.k141_134267                            57756 0 +     63517 C
e Lepilemur_ankaranensis.k141_884009                        28392 0 +     39228 C
e Lemur_catta.scaffold_1                                258411089 0 - 285822530 C
e Lagothrix_lagothricha.k141_12968                          53724 0 -    147782 C
e Indri_indri.k141_2197838                                   1216 0 +      3484 C
e Ictidomys_tridecemlineatus.JH393315.1                   7129927 0 +  13083262 C
e Hystrix_cristata.HysCri_scaffold_50788                     7688 1865 +     22540 I
e Heterocephalus_glaber.JH602058.1                        2560334 0 +  31725842 C
e Hapalemur_occidentalis.k141_797938                        49417 0 -     54384 C
e Hapalemur_meridionalis.k141_186231                        32791 0 -     42470 C
e Hapalemur_griseus.k141_1387522                             9542 0 +     56096 C
e Hapalemur_gilberti.k141_279011                             4215 0 -     11661 C
e Hapalemur_alaotrensis.k141_1280836                         5737 0 +     10286 C
e Graphiurus_murinus.GraMur_scaffold_4493                   79407 0 +    118900 C
e Galagoides_demidoff.k141_1769638                          14512 3 +     27357 I
e Galago_senegalensis.k141_964197                           17368 3 -     43889 I
e Galago_moholi.ctg555                                     215007 3 -    847004 I
e Fukomys_damarensis.KN123630.1                          13895815 0 -  19261668 C
e Eulemur_sanfordi.k141_186399                              19744 0 -     29447 C
e Eulemur_rufus.k141_1620292                                37005 0 +     46535 C
e Eulemur_rubriventer.k141_411740                           22270 0 +     26808 C
e Eulemur_mongoz.k141_825972                                19814 0 +     27497 C
e Eulemur_macaco.k141_747087                                 3142 0 -     19505 C
e Eulemur_fulvus.k141_653297                                15157 0 +    109717 C
e Eulemur_flavifrons.k141_903901                            11674 0 +     60246 C
e Eulemur_coronatus.k141_3240342                            15349 0 +     36558 C
e Eulemur_collaris.k141_1015201                              2216 0 -      4292 C
e Eulemur_albifrons.k141_715837                              8953 0 +     13586 C
e Ellobius_talpinus.LOJH01198462.1                           1233 0 -      1901 C
e Ellobius_lutescens.LOEQ01003611.1                        243491 0 -    369425 C
e Dolichotis_patagonum.DolPat_scaffold_14102                39639 0 -     73477 C
e Daubentonia_madagascariensis.ctg11                     16848799 0 +  31942871 C
e Dasyprocta_punctata.DasPun_flattened_line_634             61670 0 -    236241 C
e Cuniculus_paca.CunPac_flattened_line_16637                20532 0 +     26546 C
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 32592 1717 -     67205 I
e Ctenodactylus_gundi.CteGun_scaffold_447                  213681 0 -    956709 C
e Cricetulus_griseus.LT883672.1                          53034687 0 +  72327488 C
e Cricetomys_gambianus.CriGam_scaffold_949                 282317 0 -    399297 C
e Colobus_polykomos.k141_1406057                            19335 0 +     23629 C
e Colobus_guereza.LG08                                  147667351 0 + 156195979 C
e Colobus_angolensis.KN985967.1                          10889423 0 +  10971483 C
e Chiropotes_sagulatus.k141_773804                          18868 0 +     40510 C
e Chiropotes_israelita.k141_1189915                         74687 0 +    196370 C
e Chinchilla_lanigera.JH721867.1                         15963245 964 +  43084221 I
e Cheracebus_torquatus.k141_315545                          49883 0 +     54541 C
e Cheracebus_regulus.k141_2128895                           45204 0 +     57117 C
e Cheracebus_lugens.k141_996499                               905 0 +    188999 C
e Cheracebus_lucifer.k141_619653                             9166 0 -     18223 C
e Cheirogaleus_medius.k141_133808                           11972 0 +     13308 C
e Cheirogaleus_major.k141_1157592                           62871 0 -     68416 C
e Cephalopachus_bancanus.k141_702587                        12233 0 +     21754 C
e Cebus_unicolor.k141_239009                                16128 0 +     25043 C
e Cebus_olivaceus.k141_93739                                11884 0 -     26817 C
e Cebus_albifrons.Contig22                               18894340 0 -  29618158 C
e Cavia_tschudii.CavTsc_scaffold_488                       179471 0 +    436027 C
e Cavia_porcellus.DS562889.1                             15801299 0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15789360 0 -  24422027 C
e Carlito_syrichta.NW_007248099.1                          313229 0 +    345090 C
e Cacajao_melanocephalus.k141_1160263                       11118 0 -    134917 C
e Cacajao_hosomi.k141_303789                                18575 0 -    216513 C
e Cacajao_calvus.k141_96166                                 16528 0 +    125063 C
e Cacajao_ayresi.k141_724503                               117508 0 -    171031 C
e Avahi_peyrierasi.k141_798820                               4260 0 +      6337 C
e Avahi_laniger.k141_2840928                                10644 0 -     16375 C
e Ateles_paniscus.k141_1631200                               9605 0 -     25888 C
e Ateles_marginatus.k141_899112                             67636 0 +    119057 C
e Ateles_geoffroyi_a.k141_1300742                             19642 0 -     58268 C
e Ateles_chamek.k141_1072810                                15141 0 +     89302 C
e Ateles_belzebuth.k141_1348307                             64128 0 +     85812 C
e Ateles_geoffroyi_b.tarseq_2582                             9542855 0 +  39197703 C
e Arctocebus_calabarensis.k141_587554                        6166 4 +      9265 I
e Aotus_vociferans.k141_718647                               9569 0 +     23246 C
e Aotus_trivirgatus.k141_1740727                             9562 0 -    104377 C
e Aotus_nancymaae.KZ196176.1                              5752964 0 +   9889416 C
e Aotus_griseimembra.k141_3275623                            9006 0 +     22701 C
e Aotus_azarae.k141_3170768                                 66060 0 +     78111 C
e Alouatta_seniculus.k141_790278                             4447 0 -      9835 C
e Alouatta_puruensis.k141_1602819                             302 0 -      1470 C
e Alouatta_palliata.k141_405616                              5170 0 +     16794 C
e Alouatta_nigerrima.k141_2187093                           29334 0 -     30219 C
e Alouatta_macconnelli.k141_2318944                          2752 0 -     24210 C
e Alouatta_juara.k141_799181                                   13 0 -      1641 C
e Alouatta_discolor.k141_2023149                              268 0 +      5070 C
e Alouatta_caraya.k141_664908                                2969 0 -     12443 C
e Alouatta_belzebul.k141_276091                               713 0 +     19852 C
e Acomys_cahirinus.AcoCah_scaffold_1625                    117453 0 -    189883 C
e Gorilla_gorilla.LT578340.1                            119656067 0 - 195582420 C
e Gorilla_beringei.k141_111300                               8967 0 -     14630 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               17261 11 +    209709 CTTA----A--T-T------------at-c----------t
s Acinonyx_jubatus.LLWD01000356.1                         2039234  4 +   3721120 ---aa---a--c-----------------------------
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    117453  9 -    189883 ---A---GA--A-A------------TT-G----------C
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 I 7
s Ailuropoda_melanoleuca.LNAT01000321.1                  10662923  3 +  23371972 -------------a------------at-------------
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7099704  3 -  16596857 -------------a------------at-------------
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   21425  8 -     22067 ---A----A--A-A------------TT-A----------C
i Allactaga_bullata.AllBul_scaffold_70162               C 0 I 7
s Allenopithecus_nigroviridis.k141_2469532                   5127 11 -     60446 CTCA----A--T-G------------AT-C----------C
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         5844  6 -     29318 CTTA----A--T-----------------------------
i Allochrocebus_lhoesti.k141_3566948                    C 0 I 4
s Allochrocebus_preussi.k141_1108977                         4782 11 +     38766 CTTA----A--T-G------------AT-C----------C
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          5738 11 -     80423 CTTA----A--T-G------------AT-C----------C
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                               713  8 +     19852 ---A----A--T-T------------AT-C----------T
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                2969  8 -     12443 ---A----A--T-T------------AT-C----------T
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                              268  8 +      5070 ---A----A--T-T------------AT-C----------T
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                   13  8 -      1641 ---A----A--T-T------------AT-C----------T
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          2752  8 -     24210 ---A----A--T-T------------AT-C----------T
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           29334  8 -     30219 ---A----A--T-T------------AT-C----------T
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_405616                              5170  8 +     16794 ---A----A--T-T------------AT-C----------T
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                             302  8 -      1470 ---A----A--T-T------------AT-C----------T
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             4447  8 -      9835 ---A----A--T-T------------AT-C----------T
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3525223  7 +   4113121 --------g--t-t------------ac-t----------t
i Ammotragus_lervia.NIVO01013474.1                      I 1 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             2654  7 +     55446 --------G--T-C------------AC-T----------T
i Antilocapra_americana.AntAmePen_scaffold_27338        I 1 C 0
s Aotus_azarae.k141_3170768                                 66060  8 +     78111 ---A----A--T-T------------AT-C----------T
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            9006  8 +     22701 ---A----A--T-T------------AT-C----------T
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5752964  8 +   9889416 ---a----a--t-t------------at-c----------t
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             9562  8 -    104377 ---A----A--T-T------------AT-C----------T
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               9569  8 +     23246 ---A----A--T-T------------AT-C----------T
i Aotus_vociferans.k141_718647                          C 0 C 0
s Arctocebus_calabarensis.k141_587554                        6170  5 +      9265 -------------T------------AC-C----------T
i Arctocebus_calabarensis.k141_587554                   I 4 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9542855  8 +  39197703 ---A----A--T-T------------AT-C----------T
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             64128  8 +     85812 ---A----A--T-T------------AT-C----------T
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                15141  8 +     89302 ---A----A--T-T------------AT-C----------T
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             19642  8 -     58268 ---A----A--T-T------------AT-C----------T
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             67636  8 +    119057 ---A----A--T-T------------AT-C----------T
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               9605  8 -     25888 ---A----A--T-T------------AC-C----------T
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                10644  9 -     16375 ---A---AA--T-T------------AC-C----------T
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               4260  9 +      6337 ---A---AA--T-T------------AC-C----------T
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26383688  9 +  51448160 ---aa---a--t-t------------ac-t----------t
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        8861  9 -     13118 ---aa---a--t-t------------ac-t----------t
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   47685  7 -     72089 --------G--T-T------------GC-T----------T
i Beatragus_hunteri.BeaHun_scaffold_21644               I 1 C 0
s Bison_bison.KN264915.1                                   301829  7 -   6870073 --------g--t-t------------gc-t----------t
i Bison_bison.KN264915.1                                I 1 C 0
s Bos_indicus.CM003021.1                                 22955927  7 + 161108492 --------g--t-t------------gc-t----------t
i Bos_indicus.CM003021.1                                I 1 C 0
s Bos_mutus.JH883513.1                                     418192  7 +    998990 --------g--t-t------------gc-t----------t
i Bos_mutus.JH883513.1                                  I 1 C 0
s Bos_taurus.CM000177.6                                  22664581  7 + 158972876 --------g--t-t------------gc-t----------t
i Bos_taurus.CM000177.6                                 I 1 C 0
s Bubalus_bubalis.KI419065.1                               674344  7 +   1914593 --------g--t-t------------gc-t----------t
i Bubalus_bubalis.KI419065.1                            I 1 C 0
s Cacajao_ayresi.k141_724503                               117508  8 -    171031 ---A----A--T-T------------AT-C----------T
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 16528  8 +    125063 ---A----A--T-T------------AT-C----------T
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                18575  8 -    216513 ---A----A--T-T------------AT-C----------T
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       11118  8 -    134917 ---A----A--T-T------------AT-C----------T
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3222825  9 -   8989139 ---aa---g--t-t------------ac-t----------t
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           400527  9 -  15254737 ---aa---g--t-t------------ac-t----------t
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2976263  9 +   6889770 ---aa---g--t-t------------ac-t----------t
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11526073  1 +  39901454 -------------A---------------------------
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   21047  1 +     87036 -------------A---------------------------
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11272756  1 -  35597290 -------------A---------------------------
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11095467  1 +  39895921 -------------A---------------------------
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16462252  1 -  44759192 -------------A---------------------------
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21330303  7 + 157394656 --------g--t-t------------ac-t----------t
i Capra_aegagrus.CM003214.1                             I 1 C 0
s Capra_hircus.CM004562.1                               135711520  7 - 157403528 --------g--t-t------------ac-t----------t
i Capra_hircus.CM004562.1                               I 1 C 0
s Carlito_syrichta.NW_007248099.1                          313229  9 +    345090 ---aa---a--t-c------------ac-c----------t
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   162381  9 -    276539 ---A---AA--T-T------------AC-T----------T
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15789360  9 -  24422027 ---N---NN--N-N------------NN-N----------N
i Cavia_aperea.AVPZ01000278.1                           C 0 I 7
s Cavia_porcellus.DS562889.1                             15801299  9 -  24440124 ---aa---a--a-a------------tt-c----------t
i Cavia_porcellus.DS562889.1                            C 0 I 7
s Cavia_tschudii.CavTsc_scaffold_488                       179471  9 +    436027 ---A---AA--A-A------------TT-C----------T
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 I 7
s Cebus_albifrons.Contig22                               18894340  8 -  29618158 ---a----a--t-t------------at-c----------t
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                11884  8 -     26817 ---A----A--T-T------------AT-C----------T
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                16128  8 +     25043 ---A----A--T-T------------AT-C----------T
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                        12233  9 +     21754 ---A---AA--T-T------------AC-C----------T
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4367262  9 +   7569818 ---aa---a--t-t------------ac-t----------t
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         7019  9 -      9338 ---A---AA--T-T------------AC-T----------T
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6559068 11 +   6739814 CTTA----A--T-G------------AT-C----------C
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      30545 11 +     60454 CTTA----A--T-G------------AT-C----------C
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          5749 11 -     21101 CTTA----A--T-G------------AT-C----------C
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         63059 11 -    107033 CTTA----A--T-G------------AT-C----------C
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        5920 11 -     17608 CTTA----A--T-G------------AT-C----------C
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          3085 11 +     45019 CTTA----A--T-G------------AT-C----------T
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           3147 11 +     15177 CTTA----A--T-G------------AT-C----------C
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          5969 11 +     16677 CTTA----A--T-G------------TT-C----------C
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           28157 11 +     35983 CTTA----A--T-G------------AT-C----------C
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11994688 11 +  12117833 CTTA----A--T-G------------AT-C----------C
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46481449 11 +  46592721 CTTA----A--T-G------------AT-C----------C
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      45000 11 -     45581 CTTA----A--T-G------------AT-C----------C
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       5981 11 +     35577 CTTA----A--T-G------------AT-C----------C
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        5775 11 -     25661 CTTA----A--T-G------------AT-C----------C
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        5733 11 -     17744 CTTA----A--T-G------------AT-C----------C
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        25318 11 +     37128 CTTA----A--T-G------------AT-C----------C
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           62871  9 -     68416 ---A---AA--T-T------------AC-C----------T
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                           11972  9 +     13308 ---A---AA--T-T------------AC-C----------T
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             9166  8 -     18223 ---A----A--T-T------------AT-C----------T
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                               905  8 +    188999 ---A----A--T-T------------AT-C----------T
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           45204  8 +     57117 ---A----A--T-T------------AT-C----------T
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          49883  8 +     54541 ---A----A--T-T------------AT-C----------T
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chiropotes_israelita.k141_1189915                         74687  8 +    196370 ---A----A--T-T------------AT-C----------T
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          18868  8 +     40510 ---A----A--T-T------------AT-C----------T
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15143503 11 -  15256731 CTTA----A--T-G------------AT-C----------C
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      37967 11 -     53260 CTTA----A--T-G------------AT-C----------C
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101148526 11 + 101219884 CTTA----A--T-G------------AT-C----------C
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_629495              1917  9 -      3120 ---A---AA--T-T------------AT-T----------T
i Chrysochloris_asiatica.ChrAsi_scaffold_629495         C 0 C 0
s Condylura_cristata.JH655880.1                          60621895 19 +  78930452 ---A---TA--T-T------------AC-CTGTATTTGACt
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         1440  9 -      5782 ---A---AA--T-T------------AC-t----------t
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 282317  9 -    399297 ---T---GA--A-A------------TT-A----------C
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 I 7
s Cricetulus_griseus.LT883672.1                          53034687  9 +  72327488 ---A---Ga--a-a------------tt-a----------c
i Cricetulus_griseus.LT883672.1                         C 0 I 7
s Crocidura_indochinensis.CroInd_scaffold_27484              1317  9 -     22648 ---T---AA--T-G------------AC-C----------T
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            57217  8 -     70449 ---A---AA--TAA------------AT-------------
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  213681  9 -    956709 ---A---AA--A-A------------CC-A----------A
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 I 7
s Cuniculus_paca.CunPac_flattened_line_16637                20532  9 +     26546 ---A---AA--A-A------------TT-T----------T
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 I 7
s Dasyprocta_punctata.DasPun_flattened_line_634             61670  9 -    236241 ---A---AA--A-A------------TT-C----------T
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 I 7
s Daubentonia_madagascariensis.ctg11                     16848799  9 +  31942871 ---A---AA--C-T------------AC-C----------T
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80040313  9 -  96802777 ---aa---a--t-t------------ac-t----------t
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 325910  9 +    993696 ---aa---a--t-t------------ac-t----------t
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   6551  9 +    151128 ---A---AA--C-T------------AC-T----------T
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dipodomys_ordii.KN672545.1                              3659470  9 +   4240102 ---aa---a--t-a------------at-g----------c
i Dipodomys_ordii.KN672545.1                            I 1 I 7
s Dipodomys_stephensi.DipSte_scaffold_84338                  1828  9 -     11986 ---A---AA--T-A------------AT-G----------C
i Dipodomys_stephensi.DipSte_scaffold_84338             I 1 I 7
s Dolichotis_patagonum.DolPat_scaffold_14102                39639  9 -     73477 ---A---AA--A-A------------TT-C----------T
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 I 7
s Elaphurus_davidianus.JRFZ01086400.1                     1495901  7 +   1727528 --------g--t-t------------gt-g----------t
i Elaphurus_davidianus.JRFZ01086400.1                   I 1 C 0
s Ellobius_lutescens.LOEQ01003611.1                        243491  8 -    369425 ---A---GA--A-A------------TT-A-----------
i Ellobius_lutescens.LOEQ01003611.1                     C 0 I 5
s Ellobius_talpinus.LOJH01198462.1                           1233  8 -      1901 ---A---GA--A-A------------TT-A-----------
i Ellobius_talpinus.LOJH01198462.1                      C 0 I 5
s Enhydra_lutris.KZ291749.1                              85877158  3 +  99434291 -------------t------------at-------------
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Equus_asinus.JREZ01000062.1                             5856277  9 -   7175178 ---aa---a--t-t------------ac-t----------t
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13354777  9 +  41866177 ---aa---a--t-t------------ac-t----------t
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          16267  9 +     92910 ---aa---a--t-t------------ac-t----------t
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11540737  9 +  16010500 ---aa---a--t-t------------gt-C----------T
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48780536 11 -  48907691 CTTA----A--T-G------------AT-C----------C
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          318531  9 +    330699 ---A---AA--T-T------------AC-T----------T
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             64988  9 +     89355 ---A---AA--T-T------------AC-T----------T
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              8953  9 +     13586 ---A---AA--T-T------------AC-C----------T
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_1015201                              2216  9 -      4292 ---A---AA--T-T------------AC-C----------T
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            15349  9 +     36558 ---A---AA--T-T------------AC-C----------T
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            11674  9 +     60246 ---A---AA--T-T------------AC-C----------T
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                15157  9 +    109717 ---A---AA--T-T------------AC-C----------T
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 3142  9 -     19505 ---A---AA--T-T------------AC-C----------T
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                19814  9 +     27497 ---A---AA--T-T------------AC-C----------T
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           22270  9 +     26808 ---A---AA--T-T------------AC-C----------T
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                37005  9 +     46535 ---A---AA--T-T------------AC-C----------T
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              19744  9 -     29447 ---A---AA--T-T------------AC-C----------T
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129898653  8 - 159252932 ---aa---a--caa------------ac-------------
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129285621  8 - 158578461 ---aa---a--caa------------ac-------------
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 26720  8 +     52776 ---A---AA--CAA------------AC-------------
i Felis_nigripes.FelNig_flattened_line_8080             I 4 C 0
s Fukomys_damarensis.KN123630.1                          13895815  9 -  19261668 ---A---AA--A-A------------TT-C----------T
i Fukomys_damarensis.KN123630.1                         C 0 I 7
s Galago_moholi.ctg555                                     215010  5 -    847004 -------------T------------AC-C----------T
i Galago_moholi.ctg555                                  I 3 C 0
s Galago_senegalensis.k141_964197                           17371  5 -     43889 -------------T------------AC-C----------T
i Galago_senegalensis.k141_964197                       I 3 C 0
s Galagoides_demidoff.k141_1769638                          14515  5 +     27357 -------------T------------AC-C----------T
i Galagoides_demidoff.k141_1769638                      I 3 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               159250  9 +    324696 ---A---AA--T-T------------AT-C----------A
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    185699  7 -    189561 --------g--t-t------------gc-t----------t
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 1 C 0
s Glis_glis.GliGli_scaffold_79770                           16016  9 -     18683 ---aa---a--a-g------------aa-c----------t
i Glis_glis.GliGli_scaffold_79770                       C 0 I 88
s Gorilla_beringei.k141_111300                               8967  3 -     14630 ---------------------------T-C----------T
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119656067  3 - 195582420 ---------------------------t-c----------t
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   79407  9 +    118900 ---aa---a--a-g------------at-c----------t
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 I 85
s Hapalemur_alaotrensis.k141_1280836                         5737  9 +     10286 ---A---AA--T-C------------AC-C----------T
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             4215  9 -     11661 ---A---AA--T-C------------AC-C----------T
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             9542  9 +     56096 ---A---AA--T-C------------AC-C----------T
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        32791  9 -     42470 ---A---AA--T-C------------AC-C----------T
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        49417  9 -     54384 ---A---AA--T-T------------AC-C----------T
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              22358  8 +     53719 ---A---AG--TAA------------AT-------------
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                32573  7 -     91191 --------G--T-T------------AC-T----------T
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 1 C 0
s Heterocephalus_glaber.JH602058.1                        2560334  9 +  31725842 ---aa---a--a-a------------tt-c----------t
i Heterocephalus_glaber.JH602058.1                      C 0 I 7
s Heterohyrax_brucei.HetBruBak_scaffold_25354               62555  9 +     73687 ---A---AA--T-T------------GT-T----------C
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              150311  9 +    277961 ---A---AA--T-T------------AT-T----------T
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      282716  9 -    477199 ---aa---a--t-t------------ac-t----------t
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959                485  9 +     26078 ---A---AA--T-T------------AC-T----------T
i Hipposideros_galeritus.HipGal_scaffold_52959          C 0 C 0
s Hoolock_leuconedys.ctg315                                   349957 11 +    431944 CTTA----A--T-T------------AT-C----------T
i Hoolock_leuconedys.ctg315                                C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 22958  6 -     67322 ---A---AA--TAA---------------------------
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           20927  9 -    119109 ---A---AA--A-A------------TT-C----------C
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 I 7
s Hylobates_abbotti.k141_1816750                             1438 11 +      3202 CTTA----A--T-T------------AT-C----------T
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1633646                              1408 11 -      2102 CTTA----A--T-T------------AT-C----------T
i Hylobates_agilis.k141_1633646                         C 0 C 0
s Hylobates_klossii.k141_468230                              2925 11 +      5464 CTTA----A--T-T------------AT-C----------T
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14628273 11 -  25970782 CTTA----A--T-T------------AT-C----------T
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                             824 11 +      4161 CTTA----A--T-T------------AT-C----------T
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             35790 11 -     60944 tttt----t--t-t------------gt-t----------t
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7129927  9 +  13083262 ---ta---t--a-t------------gg-c----------t
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 I 131
s Indri_indri.k141_2197838                                   1216  9 +      3484 ---A---AA--T-T------------AC-C----------T
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              12525  9 +     17520 ---A---AA--T-T------------AC-T----------T
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8577109  8 +  11848649 ---G----A--A-A------------TT-A----------C
i Jaculus_jaculus.JH725517.1                            C 0 I 7
s Kogia_breviceps.KogBre_flattened_line_35920               27112  9 +     37189 ---A---CA--T-T------------AC-T----------T
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          53724  8 -    147782 ---A----A--T-T------------AT-C----------T
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lemur_catta.scaffold_1                                258411089  9 - 285822530 ---A---AA--T-T------------AC-C----------T
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        28392  9 +     39228 ---A---GA--T-T------------AC-C----------T
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            57756  9 +     63517 ---A---GA--T-T------------AC-C----------T
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        36136  9 -     38897 ---A---GA--T-T------------AC-C----------T
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      2182  9 -     13103 ---A---TA--T-T------------AC-T----------T
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3091150  3 -   3498232 -------------a------------at-------------
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    18447 21 +     22452 ---a---gagaa-a------------ag-cacaatgaaaaa
i Lepus_americanus.LepAme_scaffold_62849                C 0 I 6
s Lipotes_vexillifer.KE558548.1                            139477  9 +   3060487 ---aa---a--t-t------------ac-t----------t
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19252156 11 +  19376315 CTTA----A--T-G------------AT-C----------C
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           14953  5 +     84689 -------------T------------AC-C----------T
i Loris_lydekkerianus.k141_550999                       I 4 C 0
s Loris_tardigradus.ctg97                                 3782692  5 +   6799190 -------------T------------AC-C----------T
i Loris_tardigradus.ctg97                               I 4 C 0
s Loxodonta_africana.GL010040.1                          20598470  9 -  62548349 ---aa---a--t-t------------at-t----------t
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11094923  1 +  39895028 -------------A---------------------------
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             23907 11 +     74745 CTTA----A--T-G------------AT-C----------C
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12710368 11 +  12821369 CTTA----A--T-G------------AT-C----------C
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                2942 11 -     26467 CTTA----A--T-G------------AT-C----------C
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           50813 11 +     63263 CTTA----A--T-G------------AT-C----------C
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 2923 11 -     26361 CTTA----A--T-G------------AT-C----------C
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 6113 11 -      7381 CTTA----A--T-G------------AT-C----------C
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  49342 11 -     79256 CTTA----A--T-G------------AT-C----------C
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196039440 11 + 196197964 CTTA----A--T-G------------AT-C----------C
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11449610 11 +  11645122 CTTA----A--T-G------------AT-C----------C
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   8296 11 -     46448 CTTA----A--T-G------------AT-C----------C
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                5958 11 -     13212 CTTA----A--T-G------------AT-C----------C
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 19639 11 -     55006 CTTA----A--T-G------------AT-C----------C
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43844754 11 +  43892939 CTTA----A--T-G------------AT-C----------C
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               20922 11 -     24607 CTTA----A--T-G------------AT-C----------C
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               8293 11 -     27140 CTTA----A--T-G------------AT-C----------C
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43441329 11 -  43563597 CTTA----A--T-G------------AT-C----------C
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4454133 11 -   4543643 CTTA----A--T-G------------AT-C----------C
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            149335  9 +    252755 ---aa---a--t-t------------ac-t----------t
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             39483  9 +     58827 ---aa---a--t-t------------ac-t----------t
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36877796  9 +  64221397 ---ta---t--a-t------------gg-c----------t
i Marmota_marmota.CZRN01000005.1                        C 0 I 131
s Megaderma_lyra.MegLyr_scaffold_3562                       65126  5 -    234502 ---A---AA--T-T---------------------------
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             6045  3 -     87323 -------------T------------AT-------------
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_52233               15590  9 +     15977 ---A---GA--A-A------------TT-A----------C
i Meriones_unguiculatus.MerUng_scaffold_52233           C 0 I 7
s Mesocricetus_auratus.KB708139.1                         1051212  9 -  26018355 ---A---GA--A-A------------TT-A----------C
i Mesocricetus_auratus.KB708139.1                       C 0 I 7
s Mesoplodon_bidens.MesBid_scaffold_96348                    2114  9 -     12939 ---A---AA--T-T------------AC-T----------T
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16514152  9 +  47401472 ---aa---a--t-t------------ac-c----------t
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  41183  9 -     48017 ---G---AA--T-T------------AT-T----------T
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22823901  8 -  98408828 ---A---GA--A-A------------TT-A-----------
i Microtus_ochrogaster.CM001673.1                       C 0 I 5
s Miopithecus_ogouensis.k141_2935907                         5875 11 +     29742 CTTA----A--T-G------------AT-C----------C
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        16646  3 -    104932 -------------A------------AT-------------
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     4834  9 -     12809 ---A---AA--T-T------------AC-C----------T
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 149906  9 +    154973 ---A---AA--T-T------------AC-T----------T
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  5919  7 -     19904 --------G--T-T------------GC-T----------T
i Moschus_moschiferus.MosMos_scaffold_78805             I 1 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  150039  8 -    168139 ---A---AG--TAA------------AT-------------
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Mus_caroli.LT608236.1                                  70771517  9 +  92629107 ---a---ga--a-a------------tt-a----------a
i Mus_caroli.LT608236.1                                 C 0 I 7
s Mus_musculus.chr16                                     75493570  9 +  98207768 ---a---ga--a-a------------tt-a----------a
i Mus_musculus.chr16                                    C 0 I 7
s Mus_pahari.LT608305.1                                  67559947  9 +  89017189 ---A---TA--A-A------------TT-A----------C
i Mus_pahari.LT608305.1                                 C 0 I 7
s Mus_spretus.CM004110.1                                 74336297  9 +  97876770 ---a---ga--a-a------------tt-a----------a
i Mus_spretus.CM004110.1                                C 0 I 7
s Muscardinus_avellanarius.MusAve_scaffold_9643             14554 10 +     98495 ---aa---a-ta-g------------gt-c----------t
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 I 52
s Mustela_putorius.JH417978.1                             4427888  3 -  28371801 -------------t------------at-------------
i Mustela_putorius.JH417978.1                           C 0 C 0
s Nannospalax_galili.KL201303.1                            119887  9 +    362372 ---c---ta--a-a------------tT-A----------C
i Nannospalax_galili.KL201303.1                         C 0 I 7
s Neomonachus_schauinslandi.NINY01007774.1                4490045  3 -  14209539 -------------a------------at-------------
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3954497  9 -   4490290 ---aa---a--t-t------------ac-t----------t
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Nomascus_annamensis.k141_1817463                            564 11 -      1070 CTTA----A--T-T------------AT-C----------T
i Nomascus_annamensis.k141_1817463                      C 0 C 0
s Nomascus_concolor.k141_70405                                564 11 +      1153 CTTA----A--T-T------------AT-C----------T
i Nomascus_concolor.k141_70405                          C 0 C 0
s Nomascus_gabriellae.k141_1400361                            499  7 -      2203 --------A--T-T------------AT-C----------T
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_1022                             518 11 -     11638 CTTA----A--T-T------------AT-C----------T
i Nomascus_siki_b.tarseq_1022                       I 2 C 0
s Nomascus_siki_a.k141_1035055                                 3150 11 -      3602 CTTA----A--T-T------------AT-C----------T
i Nomascus_siki_a.k141_1035055                            I 2 I 14
s Nyctereutes_procyonoides.CAJHUB010000786.1                37787  1 +   3668941 -------------a---------------------------
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65571522  5 -  95554990 -------------T------------AC-C----------T
i Nycticebus_bengalensis.LG16                           I 4 C 0
s Nycticebus_coucang.k141_771591                            14931  5 +     16181 -------------T------------AC-C----------T
i Nycticebus_coucang.k141_771591                        I 4 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65679733  5 +  89412551 -------------t------------ac-c----------t
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     I 4 C 0
s Ochotona_princeps.JH802095.1                            4998934  1 -  23139505 ----------------------------------------c
i Ochotona_princeps.JH802095.1                          I 2205 I 6
s Odobenus_rosmarus.KB229369.1                             684747  3 -   3126709 -------------a------------at-------------
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1083351  7 +   1425656 --------g--t-T------------GC-t----------t
i Odocoileus_virginianus.KZ101650.1                     I 1 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         41434  7 +     78940 --------g--t-t------------gc-t----------t
i Okapia_johnstoni.LVCL01S0017931.1                     I 1 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  130091  8 +    145789 ---A---GA--A-A------------TT-G-----------
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 I 5
s Onychomys_torridus.OnyTor_scaffold_12578                  42776  9 +     62360 ---A---GA--A-A------------GC-A----------C
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 I 9
s Orcinus_orca.KB316965.1                                 7228173  9 -   7562323 ---aa---a--t-t------------ac-t----------t
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              63953  9 -     66828 ---A---AC--T-T------------AT-T----------T
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141881466 20 + 163896628 ---a---gagaa-a------------ag-c-acaattaaaa
i Oryctolagus_cuniculus.CM000803.1                      C 0 I 6
s Otocyon_megalotis.JAEUCK010005121.1                      314926  1 -    505867 -------------g---------------------------
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        4871  5 -     53940 -------------T------------GC-C----------T
i Otolemur_crassicaudatus.k141_505435                   I 3 C 0
s Otolemur_garnettii.GL873528.1                          18012844  5 -  38779656 -------------t------------gc-c----------t
i Otolemur_garnettii.GL873528.1                         I 3 C 0
s Ovis_aries.CM001582.2                                 134082363  7 - 275406953 --------g--t-t------------gc-t----------t
i Ovis_aries.CM001582.2                                 I 1 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      83591  7 +    140051 --------G--T-T------------AC-T----------T
i Ovis_canadensis.OviCan_scaffold_6251                  I 1 C 0
s Pan_paniscus.CM003386.1                               127578238 11 - 205426864 ctta----a--t-t------------at-c----------t
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120155398 11 - 196562556 ctta----a--t-t------------at-c----------t
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  39644  8 +    295523 ---A---AA--TAA------------AC-------------
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3643459  8 +  18214204 ---aa---a--taa------------ac-------------
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5033107  8 -   6340057 ---aa---a--taa------------ac-------------
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1071232  7 -   1292953 --------g--t-t------------gc-t----------t
i Pantholops_hodgsonii.KE114631.1                       I 1 C 0
s Papio_anubis.CM001492.2                               188160118 11 - 188283584 CTTA----A--T-G------------AT-C----------C
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              3208 11 +     25005 CTTA----A--T-G------------AT-C----------C
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47517490 11 +  47705337 CTTA----A--T-G------------AT-C----------C
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 71481 11 -    104429 CTTA----A--T-G------------AT-C----------C
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   10013 11 +     14967 CTTA----A--T-G------------AT-C----------C
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 5878 11 -      7628 CTTA----A--T-G------------AT-C----------C
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    121135  8 -    135482 ---C---AA--TAA------------AT-------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          10541  5 -     23713 -------------T------------GC-C----------T
i Perodicticus_ibeanus.k141_117958                      I 4 C 0
s Perodicticus_potto.k141_1136815                           11681  5 +     61070 -------------T------------GC-C----------T
i Perodicticus_potto.k141_1136815                       I 4 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       1673  9 +     49596 ---A---AA--T-A------------AT-T----------C
i Perognathus_longimembris.PerPac_flattened_line_19359  I 1 I 7
s Peromyscus_maniculatus.KI615518.1                       4955145  9 -   8017169 ---A---GA--A-A------------TC-A----------C
i Peromyscus_maniculatus.KI615518.1                     C 0 I 7
s Petromus_typicus.PetTyp_scaffold_33007                    17005  9 -     36578 ---A---AA--A-A------------TT-C----------T
i Petromus_typicus.PetTyp_scaffold_33007                I 9 I 7
s Phocoena_phocoena.PhoPho_flattened_line_53071              2638  9 +      8220 ---A---AA--T-T------------AC-T----------T
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           9109  9 +     21690 ---A---AA--T-T------------AC-T----------T
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       25815  8 +     44506 ---A----A--T-T------------AT-C----------T
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        26028  8 +     67491 ---A----A--T-T------------AT-C----------T
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      16267  8 -     98129 ---A----A--T-T------------AT-C----------T
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     25867  8 +    147771 ---A----A--T-T------------AT-C----------T
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         2503  8 -     43940 ---A----A--T-T------------AT-C----------T
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          6586  8 -     55515 ---A----A--T-T------------AT-C----------T
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         25940  8 +    152463 ---A----A--T-T------------AT-C----------T
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       3748  8 -    119457 ---A----A--T-T------------AT-C----------T
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         15663  8 +    134592 ---A----A--T-T------------AT-C----------T
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          26250  8 -     75465 ---A----A--T-T------------AT-C----------T
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              190861 11 -    373494 CTTA----A--T-T------------AC-C----------T
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19811508 11 +  19899266 CTTA----A--T-T------------AC-C----------T
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                3661  9 -      9567 ---A---AA--T-T------------GT-T----------C
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6852463  9 +  12164890 ---aa---a--t-t------------ac-c----------t
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     21493  9 -     30946 ---aa---a--t-t------------ac-c----------t
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         7549  9 +     11805 ---A---AA--T-T------------AC-C----------T
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           46897  9 +     52369 ---A---AA--T-T------------AC-C----------T
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         39284  9 -     44753 ---A---AA--T-T------------AC-C----------T
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            21207  9 +     27322 ---A---AA--T-T------------AC-C----------T
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       20841  9 -     53241 ---A---AA--T-T------------AC-C----------T
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         43105  9 -     48185 ---A---AA--T-T------------AC-C----------T
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           37941  9 +     77221 ---a---ga--a-a------------tt-a----------c
i Psammomys_obesus.NESX01026517.1                       C 0 I 7
s Pteronura_brasiliensis.PteBra_flattened_line_1343        250009  3 -    344369 -------------T------------AT-------------
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Puma_concolor.QAVW01000427.1                          131539755  8 - 161321710 ---aa---a--taa------------ac-------------
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                20215  7 +     68503 --------G--T-T------------GC-T----------T
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 1 C 0
s Rattus_norvegicus.chr11                                13917356  9 +  90463843 ---a---ga--a-a------------tt-a----------a
i Rattus_norvegicus.chr11                               C 0 I 7
s Rhinolophus_sinicus.LVEH01000179.1                      1792316  9 +   2252614 ---aa---a--t-t------------ac-t----------t
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_1069354                      211  7 -       709 --------G--T-T------------GC-t----------t
i Saiga_tatarica.SaiTat_scaffold_1069354                I 1 C 0
s Saimiri_boliviensis.NW_024100938.1                     15676273  8 -  43202129 ---a----a--t-t------------at-c----------t
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        8186  8 +     34089 ---A----A--T-T------------AT-C----------T
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              8126  8 -     60842 ---A----A--T-T------------AT-C----------T
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              8220  8 +     67014 ---A----A--T-T------------AT-C----------T
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              8197  8 +     60816 ---A----A--T-T------------AT-C----------T
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 8134  8 -     76454 ---A----A--T-T------------AT-C----------T
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17344921  8 -  30362882 ---A----A--T-T------------AT-C----------T
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         24242  8 -     62485 ---A----A--T-T------------AT-C----------T
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   39350 19 -    114521 ---A---TA--T-T------------AC-CTGTATCTGACT
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  104709  9 -    120886 ---A---GA--A-A------------TT-A----------C
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 I 7
s Solenodon_paradoxus.SolPar_flattened_line_1012            23283  9 +    739146 ---A---AA--T-T------------AC-C----------T
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17769739 10 -  27805282 ---ta---a--t-G------------ATGC----------C
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             238531  3 -    276980 -------------a------------at-------------
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            32697 20 +     62062 ---A---AG--TAAATAAATAAATAAAT-------------
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        18531 11 -  13920577 CTTA----A--T-T------------AT-C----------T
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      810500  9 +   1148477 ---A---AA--T-T------------AC-T----------T
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  61142  9 +     99546 ---A---AA--T-T------------AC-T----------T
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               31086  9 +     42269 ---A---AA--T-T------------AC-C----------C
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               64395  9 +     65473 ---A---AA--T-T------------AC-C----------C
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194011651 11 - 194193292 CTTA----A--T-G------------AT-C----------C
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   9249  5 +     90398 -------------T------------GC-T----------T
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16089547  9 +  31416278 ---aa---a--t-t------------at-t----------t
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2797476 12 -   3938065 ---aaaaaa--t-a------------aa-c----------t
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    9410  9 +     13056 ---A---AA--T-A------------AA-C----------T
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69316902  9 -  96451834 ---aa---a--t-t------------ac-t----------t
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   9889  9 +     10241 ---A---TA--T-T------------AC-C----------T
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6520221  3 +  28682327 -------------a------------at-------------
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  9105  9 -     20643 ---A---AA--T-T------------AC-C----------T
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             28640  9 -     33872 ---A---AA--T-T------------AC-C----------T
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1527935  9 -   2331223 ---aa---g--t-t------------ac-t----------t
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                144153  1 -    281493 -------------A---------------------------
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        219599  3 -    227762 -------------a------------at-------------
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_256618                      199  4 -      2259 --------------------------at-a----------t
i Zapus_hudsonius.ZapHud_scaffold_256618                N 0 I 7
s Ziphius_cavirostris.ZipCav_flattened_line_60625            1646  9 -     13665 ---A---AA--T-T------------AC-T----------T
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Eptesicus_fuscus.JH977687.1                             4708429 237 +   6522550 I
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Dinomys_branickii.DinBra_scaffold_1996                   158442 1030 +    228994 I
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           4051 456 -      6963 I
e Tonatia_saurophila.TonSau_scaffold_3334                  137563 275 -    259118 I
e Tamandua_tetradactyla.TamTet_scaffold_26877               16259 379 +     45698 I
e Tadarida_brasiliensis.TadBra_scaffold_61492                1822 242 +     20549 I
e Sus_scrofa.CM000824.4                                 189273670 1086 + 218635234 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Pteronotus_parnellii.KE867983.1                            5588 252 -     27784 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             6589 379 -      8794 I
e Myotis_myotis.MyoMyo_scaffold_6123                        13515 236 +     66751 I
e Myotis_lucifugus.GL429887.1                             3468272 238 -   3747815 I
e Myotis_davidii.KB114863.1                               5022194 233 +   6462685 I
e Myotis_brandtii.KE161952.1                               970769 237 +   8389877 I
e Murina_feae.MurFea_scaffold_2254                          23900 236 -    100666 I
e Mormoops_blainvillei.MorMeg_scaffold_2952                162937 259 +    265003 I
e Miniopterus_schreibersii.MinSch_scaffold_24116            36998 214 +     45743 I
e Miniopterus_natalensis.LDJU01000022.1                   8212509 213 +  10048721 I
e Micronycteris_hirsuta.MicHir_scaffold_37978               24387 274 -     32043 I
e Lasiurus_borealis.LasBor_scaffold_59542                    5042 241 +     26176 I
e Elephantulus_edwardii.JH947210.1                        7830035 1277 +  15467074 I
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Echinops_telfairi.JH980316.1                           22999931  2 -  44670279 I
e Desmodus_rotundus.KZ672188.1                           18700517 262 -  18957592 I
e Dasypus_novemcinctus.JH568778.1                          185121 383 -   6883506 I
e Choloepus_hoffmanni.KN194586.1                           763329 503 +    964067 I
e Choloepus_didactylus.ChoDid_scaffold_36182                18024 504 -     21363 I
e Carollia_perspicillata.CarPer_scaffold_4436               61226 261 +     67245 I
e Artibeus_jamaicensis.ArtJam_scaffold_41619                10440 261 -     29036 I
e Anoura_caudifer.AnoCau_scaffold_422                      392020 257 -    631301 I
e Xerus_inauris.XerIna_scaffold_7898                       128400 2868 -    134049 I
e Trachypithecus_pileatus.k141_1022309                       5226  0 +     13828 C
e Trachypithecus_phayrei.ctg3                            44662914  0 -  44834318 C
e Trachypithecus_obscurus.k141_1115109                       8130  0 -     28054 C
e Trachypithecus_melamera.k141_699241                        2986  0 -     24393 C
e Trachypithecus_leucocephalus.k141_381681                   3005  0 +     12481 C
e Trachypithecus_laotum.k141_760702                          4719  0 +     14371 C
e Trachypithecus_hatinhensis.k141_504423                     6067  0 -     15592 C
e Trachypithecus_germaini.k141_868450                        3883  0 -     11566 C
e Trachypithecus_geei.k141_670367                           46082  0 -     54611 C
e Trachypithecus_francoisi.k141_768164                       4689  0 -     14244 C
e Trachypithecus_cristatus.k141_1011511                      5261  0 -     12939 C
e Trachypithecus_crepusculus.k141_1588528                   23360  0 -     32910 C
e Trachypithecus_auratus.k141_738098                        29800  0 +     38948 C
e Spermophilus_dauricus.KZ294190.1                        2243740 32 +   2842873 I
e Semnopithecus_vetulus.k141_1143185                        16479  0 +     30600 C
e Semnopithecus_schistaceus.k141_387461                     33457  0 +     42640 C
e Semnopithecus_priam.k141_410937                           40312  0 +     46263 C
e Semnopithecus_johnii.k141_785014                         121532  0 +    130994 C
e Semnopithecus_hypoleucos.k141_761524                      11528  0 +     20762 C
e Semnopithecus_entellus.k141_1572367                        6153  0 +     15331 C
e Rhinopithecus_strykeri.ctg4                            44859307  0 -  45163003 C
e Rhinopithecus_bieti.k119_554384                            2917  0 -     17045 C
e Pygathrix_nigripes_a.k141_101123                             8537  0 +     18040 C
e Pygathrix_nigripes_b.ctg79                                 6809148  0 +   6970761 C
e Pygathrix_cinerea.k141_374971                             32651  0 +     56732 C
e Presbytis_mitrata.k141_860013                              8661  0 +     14865 C
e Presbytis_comata.k141_672698                               8546  0 -     15069 C
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000036.1               26743271  0 +  26888534 C
e Piliocolobus_kirkii.k141_929665                            4788  0 +      7694 C
e Piliocolobus_gordonorum.k141_1270531                       5421  0 -     17985 C
e Piliocolobus_badius.k141_1987485                           4802  0 -      5908 C
e Octodon_degus.JH651621.1                                3687420 1881 +  10294119 I
e Nasalis_larvatus.k141_153429                              11264  0 +     48152 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     91920 1922 -    117718 I
e Hystrix_cristata.HysCri_scaffold_50788                     7688 1865 +     22540 I
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 32592 1717 -     67205 I
e Colobus_polykomos.k141_1406057                            19335  0 +     23629 C
e Colobus_guereza.LG08                                  147667351  0 + 156195979 C
e Colobus_angolensis.KN985967.1                          10889423  0 +  10971483 C
e Chinchilla_lanigera.JH721867.1                         15963245 964 +  43084221 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               17272  8 +    209709 cca-tt--------t-tg
s Acinonyx_jubatus.LLWD01000356.1                         2039238  1 +   3721120 --------------a---
i Acinonyx_jubatus.LLWD01000356.1                       C 0 I 1
s Acomys_cahirinus.AcoCah_scaffold_1625                    117469  8 -    189883 ATA-TT--------T-AA
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 7 I 5
s Ailuropoda_melanoleuca.LNAT01000321.1                  10662926  1 +  23371972 --------------a---
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 I 1
s Ailurus_fulgens.LNAC01000003.1                          7099707  1 -  16596857 --------------a---
i Ailurus_fulgens.LNAC01000003.1                        C 0 I 1
s Allactaga_bullata.AllBul_scaffold_70162                   21440  8 -     22067 CCA-TT--------T-TG
i Allactaga_bullata.AllBul_scaffold_70162               I 7 I 5
s Allenopithecus_nigroviridis.k141_2469532                   5138  8 -     60446 CCA-TT--------T-TG
i Allenopithecus_nigroviridis.k141_2469532              C 0 I 6
s Allochrocebus_lhoesti.k141_3566948                         5854  8 -     29318 CCA-TT--------T-TG
i Allochrocebus_lhoesti.k141_3566948                    I 4 I 6
s Allochrocebus_preussi.k141_1108977                         4793  8 +     38766 CCA-TT--------T-TG
i Allochrocebus_preussi.k141_1108977                    C 0 I 6
s Allochrocebus_solatus.k141_371672                          5749  8 -     80423 CCA-TT--------T-TG
i Allochrocebus_solatus.k141_371672                     C 0 I 6
s Alouatta_belzebul.k141_276091                               721  8 +     19852 CCG-TT--------T-TG
i Alouatta_belzebul.k141_276091                         C 0 I 6
s Alouatta_caraya.k141_664908                                2977  8 -     12443 CCA-TT--------T-TG
i Alouatta_caraya.k141_664908                           C 0 I 6
s Alouatta_discolor.k141_2023149                              276  8 +      5070 CCG-TT--------T-TG
i Alouatta_discolor.k141_2023149                        C 0 I 6
s Alouatta_juara.k141_799181                                   21  8 -      1641 CCA-TT--------T-TG
i Alouatta_juara.k141_799181                            C 0 I 6
s Alouatta_macconnelli.k141_2318944                          2760  8 -     24210 CCA-TT--------T-TG
i Alouatta_macconnelli.k141_2318944                     C 0 I 6
s Alouatta_nigerrima.k141_2187093                           29342  8 -     30219 CCA-TT--------T-TG
i Alouatta_nigerrima.k141_2187093                       C 0 I 6
s Alouatta_palliata.k141_405616                              5178  8 +     16794 CCG-TT--------T-TG
i Alouatta_palliata.k141_405616                         C 0 I 6
s Alouatta_puruensis.k141_1602819                             310  8 -      1470 CCA-TT--------T-TG
i Alouatta_puruensis.k141_1602819                       C 0 I 6
s Alouatta_seniculus.k141_790278                             4455  8 -      9835 CCA-TT--------T-TG
i Alouatta_seniculus.k141_790278                        C 0 I 6
s Ammotragus_lervia.NIVO01013474.1                        3525230  7 +   4113121 cca-ttt-------t---
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             2661  7 +     55446 CCA-TT-------TT---
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 66068  8 +     78111 CCA-TT--------T-TG
i Aotus_azarae.k141_3170768                             C 0 I 6
s Aotus_griseimembra.k141_3275623                            9014  8 +     22701 CCA-TT--------T-TG
i Aotus_griseimembra.k141_3275623                       C 0 I 6
s Aotus_nancymaae.KZ196176.1                              5752972  8 +   9889416 cca-tt--------t-tg
i Aotus_nancymaae.KZ196176.1                            C 0 I 6
s Aotus_trivirgatus.k141_1740727                             9570  8 -    104377 CCA-TT--------T-TG
i Aotus_trivirgatus.k141_1740727                        C 0 I 6
s Aotus_vociferans.k141_718647                               9577  8 +     23246 CCA-TT--------T-TG
i Aotus_vociferans.k141_718647                          C 0 I 6
s Aplodontia_rufa.AprRuf_scaffold_101456                     2087  9 +     11424 TCCACT--------T-TA
i Aplodontia_rufa.AprRuf_scaffold_101456                N 0 I 7
s Arctocebus_calabarensis.k141_587554                        6175  8 +      9265 CCA-TT--------T-TG
i Arctocebus_calabarensis.k141_587554                   C 0 I 6
s Ateles_geoffroyi_b.tarseq_2582                             9542863  8 +  39197703 CCA-TT--------T-TG
i Ateles_geoffroyi_b.tarseq_2582                           C 0 I 6
s Ateles_belzebuth.k141_1348307                             64136  8 +     85812 CCA-TT--------T-TG
i Ateles_belzebuth.k141_1348307                         C 0 I 6
s Ateles_chamek.k141_1072810                                15149  8 +     89302 CCA-TT--------T-TG
i Ateles_chamek.k141_1072810                            C 0 I 6
s Ateles_geoffroyi_a.k141_1300742                             19650  8 -     58268 CCA-TT--------T-TG
i Ateles_geoffroyi_a.k141_1300742                         C 0 I 6
s Ateles_marginatus.k141_899112                             67644  8 +    119057 CCA-TT--------T-TG
i Ateles_marginatus.k141_899112                         C 0 I 6
s Ateles_paniscus.k141_1631200                               9613  8 -     25888 CCA-TT--------T-TG
i Ateles_paniscus.k141_1631200                          C 0 I 6
s Avahi_laniger.k141_2840928                                10653  8 -     16375 CCA-TT--------T-TG
i Avahi_laniger.k141_2840928                            C 0 I 6
s Avahi_peyrierasi.k141_798820                               4269  8 +      6337 CCA-TT--------T-TG
i Avahi_peyrierasi.k141_798820                          C 0 I 6
s Balaenoptera_acutorostrata.KI537095.1                  26383697  7 +  51448160 cca-ttt-------t---
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        8870  7 -     13118 cca-ttt-------t---
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   47692  7 -     72089 CCA-TT-------TT---
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   301836  7 -   6870073 cca-ttt-------t---
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22955934  7 + 161108492 cca-ttt-------t---
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     418199  7 +    998990 cca-ttt-------t---
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22664588  7 + 158972876 cca-ttt-------t---
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               674351  7 +   1914593 cca-ttt-------t---
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               117516  8 -    171031 CAA-TT--------T-TG
i Cacajao_ayresi.k141_724503                            C 0 I 6
s Cacajao_calvus.k141_96166                                 16536  8 +    125063 CAA-TT--------T-TG
i Cacajao_calvus.k141_96166                             C 0 I 6
s Cacajao_hosomi.k141_303789                                18583  8 -    216513 CAA-TT--------T-TG
i Cacajao_hosomi.k141_303789                            C 0 I 6
s Cacajao_melanocephalus.k141_1160263                       11126  8 -    134917 CAA-TT--------T-TG
i Cacajao_melanocephalus.k141_1160263                   C 0 I 6
s Camelus_bactrianus.KN276303.1                           3222834  7 -   8989139 cca-ttt-------t---
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           400536  7 -  15254737 cca-ttt-------t---
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2976272  7 +   6889770 cca-ttt-------t---
i Camelus_ferus.KB016973.1                              C 0 C 0
s Capra_aegagrus.CM003214.1                              21330310  7 + 157394656 cca-ttt-------t---
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135711527  7 - 157403528 cca-ttt-------t---
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          313238  9 +    345090 ctattt--------t-tt
i Carlito_syrichta.NW_007248099.1                       C 0 I 6
s Catagonus_wagneri.CatWag_scaffold_1305                   162390  7 -    276539 CCA-TT-------TT---
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15789376  8 -  24422027 NNN-NN--------N-NN
i Cavia_aperea.AVPZ01000278.1                           I 7 I 5
s Cavia_porcellus.DS562889.1                             15801315  8 -  24440124 CCA-TT--------T-TG
i Cavia_porcellus.DS562889.1                            I 7 I 5
s Cavia_tschudii.CavTsc_scaffold_488                       179487  8 +    436027 CCA-TT--------T-TG
i Cavia_tschudii.CavTsc_scaffold_488                    I 7 I 5
s Cebus_albifrons.Contig22                               18894348  8 -  29618158 cca-tt--------t-tg
i Cebus_albifrons.Contig22                              C 0 I 6
s Cebus_olivaceus.k141_93739                                11892  8 -     26817 CCA-TT--------T-TG
i Cebus_olivaceus.k141_93739                            C 0 I 6
s Cebus_unicolor.k141_239009                                16136  8 +     25043 CCA-TT--------T-TG
i Cebus_unicolor.k141_239009                            C 0 I 6
s Cephalopachus_bancanus.k141_702587                        12242  9 +     21754 CTATTT--------T-TT
i Cephalopachus_bancanus.k141_702587                    C 0 I 6
s Ceratotherium_simum.JH767818.1                          4367271 14 +   7569818 tca-tttttgacttc---
i Ceratotherium_simum.JH767818.1                        C 0 I 1
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         7028 14 -      9338 TCA-TTTTTGACTTC---
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 I 1
s Cercocebus_atys.KQ010443.1                              6559079  8 +   6739814 CCA-TT--------T-TG
i Cercocebus_atys.KQ010443.1                            C 0 I 6
s Cercocebus_chrysogaster.k141_2328246                      30556  8 +     60454 CCA-TT--------T-TG
i Cercocebus_chrysogaster.k141_2328246                  C 0 I 6
s Cercocebus_lunulatus.k141_4634644                          5760  8 -     21101 CCA-TT--------T-TG
i Cercocebus_lunulatus.k141_4634644                     C 0 I 6
s Cercocebus_torquatus.k141_3969582                         63070  8 -    107033 CCA-TT--------T-TG
i Cercocebus_torquatus.k141_3969582                     C 0 I 6
s Cercopithecus_ascanius.k141_4123525                        5931  8 -     17608 CCA-TT--------T-TG
i Cercopithecus_ascanius.k141_4123525                   C 0 I 6
s Cercopithecus_cephus.k141_3893260                          3096  8 +     45019 CCA-TT--------T-TG
i Cercopithecus_cephus.k141_3893260                     C 0 I 6
s Cercopithecus_diana.k141_2561715                           3158  8 +     15177 CCA-TT--------T-TG
i Cercopithecus_diana.k141_2561715                      C 0 I 6
s Cercopithecus_hamlyni.k141_129805                          5980  8 +     16677 CCA-TT--------T-TG
i Cercopithecus_hamlyni.k141_129805                     C 0 I 6
s Cercopithecus_lowei.k141_623764                           28168  8 +     35983 CCA-TT--------T-TG
i Cercopithecus_lowei.k141_623764                       C 0 I 6
s Cercopithecus_albogularis.ctg51                              11994699  8 +  12117833 CCA-TT--------T-TG
i Cercopithecus_albogularis.ctg51                             C 0 I 6
s Cercopithecus_mona.ctg12                               46481460  8 +  46592721 CCA-TT--------T-TG
i Cercopithecus_mona.ctg12                              C 0 I 6
s Cercopithecus_neglectus.k141_2078027                      45011  8 -     45581 CCA-TT--------T-TG
i Cercopithecus_neglectus.k141_2078027                  C 0 I 6
s Cercopithecus_nictitans.k141_1129315                       5992  8 +     35577 CCA-TT--------T-TG
i Cercopithecus_nictitans.k141_1129315                  C 0 I 6
s Cercopithecus_petaurista.k141_64532                        5786  8 -     25661 CCA-TT--------T-TG
i Cercopithecus_petaurista.k141_64532                   C 0 I 6
s Cercopithecus_pogonias.k141_3109732                        5744  8 -     17744 CCA-TT--------T-TG
i Cercopithecus_pogonias.k141_3109732                   C 0 I 6
s Cercopithecus_roloway.k141_2263608                        25329  8 +     37128 CCA-TT--------T-TG
i Cercopithecus_roloway.k141_2263608                    C 0 I 6
s Cheirogaleus_major.k141_1157592                           62880  7 -     68416 CC--CT--------T-TG
i Cheirogaleus_major.k141_1157592                       C 0 I 6
s Cheirogaleus_medius.k141_133808                           11981  7 +     13308 CC--CT--------T-TG
i Cheirogaleus_medius.k141_133808                       C 0 I 6
s Cheracebus_lucifer.k141_619653                             9174  8 -     18223 CCA-TT--------T-TG
i Cheracebus_lucifer.k141_619653                        C 0 I 6
s Cheracebus_lugens.k141_996499                               913  8 +    188999 CCA-TT--------T-TG
i Cheracebus_lugens.k141_996499                         C 0 I 6
s Cheracebus_regulus.k141_2128895                           45212  8 +     57117 CCA-TT--------T-TG
i Cheracebus_regulus.k141_2128895                       C 0 I 6
s Cheracebus_torquatus.k141_315545                          49891  8 +     54541 CCA-TT--------T-TG
i Cheracebus_torquatus.k141_315545                      C 0 I 6
s Chiropotes_israelita.k141_1189915                         74695  8 +    196370 CCA-TT--------T-TG
i Chiropotes_israelita.k141_1189915                     C 0 I 6
s Chiropotes_sagulatus.k141_773804                          18876  8 +     40510 CCA-TT--------T-TG
i Chiropotes_sagulatus.k141_773804                      C 0 I 6
s Chlorocebus_aethiops.ctg22                             15143514  8 -  15256731 CCA-TT--------T-TG
i Chlorocebus_aethiops.ctg22                            C 0 I 6
s Chlorocebus_pygerythrus.k141_1486215                      37978  8 -     53260 CCA-TT--------T-TG
i Chlorocebus_pygerythrus.k141_1486215                  C 0 I 6
s Chlorocebus_sabaeus.CM001963.2                        101148537  8 + 101219884 CCA-TT--------T-TG
i Chlorocebus_sabaeus.CM001963.2                        C 0 I 6
s Chrysochloris_asiatica.ChrAsi_scaffold_629495              1926  6 -      3120 CCA-TT--------T---
i Chrysochloris_asiatica.ChrAsi_scaffold_629495         C 0 I 8
s Condylura_cristata.JH655880.1                          60621914  3 +  78930452 tca---------------
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         1449  6 -      5782 cta-tt--------t---
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 I 478
s Cricetomys_gambianus.CriGam_scaffold_949                 282333  8 -    399297 CTA-TT--------T-AA
i Cricetomys_gambianus.CriGam_scaffold_949              I 7 I 5
s Cricetulus_griseus.LT883672.1                          53034703  8 +  72327488 cta-tt--------t-aa
i Cricetulus_griseus.LT883672.1                         I 7 I 5
s Crocidura_indochinensis.CroInd_scaffold_27484              1326  6 -     22648 TCA-TT--------T---
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            57225  1 -     70449 --------------A---
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 I 1
s Ctenodactylus_gundi.CteGun_scaffold_447                  213697  9 -    956709 TCA-TT--------TTTG
i Ctenodactylus_gundi.CteGun_scaffold_447               I 7 I 6
s Cuniculus_paca.CunPac_flattened_line_16637                20548  8 +     26546 CCA-TT--------T-TT
i Cuniculus_paca.CunPac_flattened_line_16637            I 7 I 5
s Dasyprocta_punctata.DasPun_flattened_line_634             61686  8 -    236241 CCA-TT--------T-TG
i Dasyprocta_punctata.DasPun_flattened_line_634         I 7 I 5
s Daubentonia_madagascariensis.ctg11                     16848808  8 +  31942871 CCA-TT--------T-TG
i Daubentonia_madagascariensis.ctg11                    C 0 I 6
s Delphinapterus_leucas.KZ290064.1                       80040322  7 -  96802777 cca-ttt-------t---
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 325919 13 +    993696 tca-tttt-gacttt---
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 I 1
s Diceros_bicornis.DicBicMic_scaffold_9545                   6560 13 +    151128 TCA-TT-TTGACTTT---
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 I 1
s Dipodomys_ordii.KN672545.1                              3659486  9 +   4240102 TCA-TC--------TATG
i Dipodomys_ordii.KN672545.1                            I 7 I 396
s Dipodomys_stephensi.DipSte_scaffold_84338                  1844  9 -     11986 TCA-TC--------TATG
i Dipodomys_stephensi.DipSte_scaffold_84338             I 7 I 386
s Dolichotis_patagonum.DolPat_scaffold_14102                39655  8 -     73477 CCA-TT--------T-TG
i Dolichotis_patagonum.DolPat_scaffold_14102            I 7 I 5
s Elaphurus_davidianus.JRFZ01086400.1                     1495908  7 +   1727528 cta-ttt-------t---
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        243504  8 -    369425 CTA-TT--------T-AA
i Ellobius_lutescens.LOEQ01003611.1                     I 5 I 5
s Ellobius_talpinus.LOJH01198462.1                           1246  8 -      1901 CTA-TT--------T-AA
i Ellobius_talpinus.LOJH01198462.1                      I 5 I 5
s Enhydra_lutris.KZ291749.1                              85877161  1 +  99434291 --------------a---
i Enhydra_lutris.KZ291749.1                             C 0 I 1
s Equus_asinus.JREZ01000062.1                             5856286 12 -   7175178 tca-ttt--gacttt---
i Equus_asinus.JREZ01000062.1                           C 0 I 1
s Equus_caballus.CM000402.2                              13354786 12 +  41866177 tca-ttt--gacttt---
i Equus_caballus.CM000402.2                             C 0 I 1
s Equus_przewalskii.ATBW01073585.1                          16276 12 +     92910 tca-ttt--gacttt---
i Equus_przewalskii.ATBW01073585.1                      C 0 I 1
s Erinaceus_europaeus.JH835290.1                         11540746  6 +  16010500 CCA-TT--------T---
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48780547  8 -  48907691 CCA-TT--------T-TG
i Erythrocebus_patas.Contig8                            C 0 I 6
s Eschrichtius_robustus.EscRob_flattened_line_685          318540  7 +    330699 TCA-TT-------TT---
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             64997  7 +     89355 CCA-TT-------TT---
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              8962  8 +     13586 CCA-TT--------T-TG
i Eulemur_albifrons.k141_715837                         C 0 I 6
s Eulemur_collaris.k141_1015201                              2225  8 -      4292 CCA-TT--------T-TG
i Eulemur_collaris.k141_1015201                         C 0 I 6
s Eulemur_coronatus.k141_3240342                            15358  8 +     36558 CCA-TT--------T-TG
i Eulemur_coronatus.k141_3240342                        C 0 I 6
s Eulemur_flavifrons.k141_903901                            11683  8 +     60246 CCA-TT--------T-GG
i Eulemur_flavifrons.k141_903901                        C 0 I 6
s Eulemur_fulvus.k141_653297                                15166  8 +    109717 CCA-TT--------T-TG
i Eulemur_fulvus.k141_653297                            C 0 I 6
s Eulemur_macaco.k141_747087                                 3151  8 -     19505 CCA-TT--------T-TG
i Eulemur_macaco.k141_747087                            C 0 I 6
s Eulemur_mongoz.k141_825972                                19823  8 +     27497 CCA-TT--------T-TG
i Eulemur_mongoz.k141_825972                            C 0 I 6
s Eulemur_rubriventer.k141_411740                           22279  8 +     26808 CCA-TT--------T-TG
i Eulemur_rubriventer.k141_411740                       C 0 I 6
s Eulemur_rufus.k141_1620292                                37014  8 +     46535 CCA-TT--------T-TG
i Eulemur_rufus.k141_1620292                            C 0 I 6
s Eulemur_sanfordi.k141_186399                              19753  8 -     29447 CCA-TT--------T-TG
i Eulemur_sanfordi.k141_186399                          C 0 I 6
s Felis_catus.CM001386.2                                129898661  1 - 159252932 --------------a---
i Felis_catus.CM001386.2                                C 0 I 1
s Felis_catus_fca126.CM031420.1                         129285629  1 - 158578461 --------------a---
i Felis_catus_fca126.CM031420.1                         C 0 I 1
s Felis_nigripes.FelNig_flattened_line_8080                 26728  1 +     52776 --------------A---
i Felis_nigripes.FelNig_flattened_line_8080             C 0 I 1
s Fukomys_damarensis.KN123630.1                          13895831  8 -  19261668 aca-tt--------t-tg
i Fukomys_damarensis.KN123630.1                         I 7 I 5
s Galago_moholi.ctg555                                     215015  8 -    847004 CCA-TT--------T-TG
i Galago_moholi.ctg555                                  C 0 I 7
s Galago_senegalensis.k141_964197                           17376  8 -     43889 CCA-TT--------T-TG
i Galago_senegalensis.k141_964197                       C 0 I 7
s Galagoides_demidoff.k141_1769638                          14520  8 +     27357 CCA-TT--------T-TG
i Galagoides_demidoff.k141_1769638                      C 0 I 6
s Galeopterus_variegatus.GalVar_scaffold_354               159259  8 +    324696 GTA-TA--------T-TG
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 I 6
s Giraffa_tippelskirchi.LVKQ01S012154.1                    185706  7 -    189561 cca-ttt-------t---
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Gorilla_beringei.k141_111300                               8970  8 -     14630 CCA-TT--------T-TG
i Gorilla_beringei.k141_111300                          C 0 I 6
s Gorilla_gorilla.LT578340.1                            119656070  8 - 195582420 cca-tt--------t-tg
i Gorilla_gorilla.LT578340.1                            C 0 I 6
s Hapalemur_alaotrensis.k141_1280836                         5746  8 +     10286 CCA-TT--------T-TG
i Hapalemur_alaotrensis.k141_1280836                    C 0 I 6
s Hapalemur_gilberti.k141_279011                             4224  8 -     11661 CCA-TT--------T-TG
i Hapalemur_gilberti.k141_279011                        C 0 I 6
s Hapalemur_griseus.k141_1387522                             9551  8 +     56096 CCA-TT--------T-TG
i Hapalemur_griseus.k141_1387522                        C 0 I 6
s Hapalemur_meridionalis.k141_186231                        32800  8 -     42470 CCA-TT--------T-TG
i Hapalemur_meridionalis.k141_186231                    C 0 I 6
s Hapalemur_occidentalis.k141_797938                        49426  8 -     54384 CCA-TT--------T-TG
i Hapalemur_occidentalis.k141_797938                    C 0 I 6
s Helogale_parvula.HelPar_flattened_line_22962              22366  1 +     53719 --------------G---
i Helogale_parvula.HelPar_flattened_line_22962          C 0 I 1
s Hemitragus_hylocrius.HemHyl_scaffold_16669                32580  7 -     91191 CCA-TT-------TT---
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2560350  8 +  31725842 cca-tt--------t-tg
i Heterocephalus_glaber.JH602058.1                      I 7 I 5
s Heterohyrax_brucei.HetBruBak_scaffold_25354               62564  4 +     73687 CCT-T-------------
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 I 5
s Hippopotamus_amphibius.HipAmp_scaffold_1308              150320  7 +    277961 CCA-TT-------CT---
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      282725  6 -    477199 tca-tt--------t---
i Hipposideros_armiger.JXIK01001085.1                   C 0 I 8
s Hipposideros_galeritus.HipGal_scaffold_52959                494  6 +     26078 TCA-TT--------T---
i Hipposideros_galeritus.HipGal_scaffold_52959          C 0 I 8
s Hoolock_leuconedys.ctg315                                   349968  8 +    431944 CCA-TT--------T-TG
i Hoolock_leuconedys.ctg315                                C 0 I 6
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           20943  8 -    119109 CCG-TT--------T-TG
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       I 7 I 5
s Hylobates_abbotti.k141_1816750                             1449  8 +      3202 CCA-TT--------T-TG
i Hylobates_abbotti.k141_1816750                        C 0 I 6
s Hylobates_agilis.k141_1633646                              1419  8 -      2102 CCA-TT--------T-TG
i Hylobates_agilis.k141_1633646                         C 0 I 6
s Hylobates_klossii.k141_468230                              2936  8 +      5464 CCA-TT--------T-TG
i Hylobates_klossii.k141_468230                         C 0 I 6
s Hylobates_pileatus_b.ContigUN                                 14628284  8 -  25970782 CCA-TT--------T-TG
i Hylobates_pileatus_b.ContigUN                                C 0 I 6
s Hylobates_muelleri.k141_1139146                             835  8 +      4161 CCA-TT--------T-TG
i Hylobates_muelleri.k141_1139146                       C 0 I 6
s Hylobates_pileatus_a.tarseq_592                             35801  8 -     60944 ttt-tt--------t-tt
i Hylobates_pileatus_a.tarseq_592                         C 0 I 6
s Ictidomys_tridecemlineatus.JH393315.1                   7130067  8 +  13083262 TCc-at--------t-tg
i Ictidomys_tridecemlineatus.JH393315.1                 I 131 I 7
s Indri_indri.k141_2197838                                   1225  8 +      3484 CCA-TT--------T-TG
i Indri_indri.k141_2197838                              C 0 I 6
s Inia_geoffrensis.IniGeo_flattened_line_66725              12534  7 +     17520 CCA-TT-------TT---
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8577124  8 +  11848649 CTA-CT--------T-TG
i Jaculus_jaculus.JH725517.1                            I 7 I 5
s Kogia_breviceps.KogBre_flattened_line_35920               27121  7 +     37189 CCA-TT-------TT---
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          53732  8 -    147782 CCA-TT--------T-TG
i Lagothrix_lagothricha.k141_12968                      C 0 I 6
s Lemur_catta.scaffold_1                                258411098  8 - 285822530 CCA-TT--------T-TG
i Lemur_catta.scaffold_1                                C 0 I 6
s Lepilemur_ankaranensis.k141_884009                        28401  8 +     39228 CCA-TT--------T-TG
i Lepilemur_ankaranensis.k141_884009                    C 0 I 6
s Lepilemur_dorsalis.k141_134267                            57765  8 +     63517 CCA-TT--------T-TG
i Lepilemur_dorsalis.k141_134267                        C 0 I 6
s Lepilemur_ruficaudatus.k141_574529                        36145  8 -     38897 CCA-TT--------T-TG
i Lepilemur_ruficaudatus.k141_574529                    C 0 I 6
s Lepilemur_septentrionalis.k141_710646                      2191  8 -     13103 CCA-TT--------T-TG
i Lepilemur_septentrionalis.k141_710646                 C 0 I 6
s Leptonychotes_weddellii.KB714749.1                      3091153  1 -   3498232 --------------a---
i Leptonychotes_weddellii.KB714749.1                    C 0 I 1
s Lepus_americanus.LepAme_scaffold_62849                    18474  4 +     22452 -----t--------t-ta
i Lepus_americanus.LepAme_scaffold_62849                I 6 I 5
s Lipotes_vexillifer.KE558548.1                            139486  2 +   3060487 cC----------------
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19252167  8 +  19376315 CCA-TT--------T-TG
i Lophocebus_aterrimus.ctg55                            C 0 I 6
s Loris_lydekkerianus.k141_550999                           14958  8 +     84689 CCA-TT--------T-TG
i Loris_lydekkerianus.k141_550999                       C 0 I 6
s Loris_tardigradus.ctg97                                 3782697  8 +   6799190 CCA-TT--------T-TG
i Loris_tardigradus.ctg97                               C 0 I 6
s Loxodonta_africana.GL010040.1                          20598479  6 -  62548349 cca-tt--------t---
i Loxodonta_africana.GL010040.1                         C 0 I 8
s Macaca_arctoides.k141_2201161                             23918  8 +     74745 CCA-TT--------T-TG
i Macaca_arctoides.k141_2201161                         C 0 I 6
s Macaca_assamensis.Contig65                             12710379  8 +  12821369 CCA-TT--------T-TG
i Macaca_assamensis.Contig65                            C 0 I 6
s Macaca_cyclopis.k119_883699                                2953  8 -     26467 CCA-TT--------T-TG
i Macaca_cyclopis.k119_883699                           C 0 I 6
s Macaca_fascicularis.k141_155037                           50824  8 +     63263 CCA-TT--------T-TG
i Macaca_fascicularis.k141_155037                       C 0 I 6
s Macaca_fuscata.k119_938422                                 2934  8 -     26361 CCA-TT--------T-TG
i Macaca_fuscata.k119_938422                            C 0 I 6
s Macaca_leonina.k141_467472                                 6124  8 -      7381 CCA-TT--------T-TG
i Macaca_leonina.k141_467472                            C 0 I 6
s Macaca_maura.k141_251854                                  49353  8 -     79256 CCA-TT--------T-TG
i Macaca_maura.k141_251854                              C 0 I 6
s Macaca_mulatta.NC_041755.1                            196039451  8 + 196197964 CCA-TT--------T-TG
i Macaca_mulatta.NC_041755.1                            C 0 I 6
s Macaca_nemestrina.KQ004885.1                           11449621  8 +  11645122 CCA-TT--------T-TG
i Macaca_nemestrina.KQ004885.1                          C 0 I 6
s Macaca_nigra.k141_282495                                   8307  8 -     46448 CCA-TT--------T-TG
i Macaca_nigra.k141_282495                              C 0 I 6
s Macaca_radiata.k141_3680256                                5969  8 -     13212 CCA-TT--------T-TG
i Macaca_radiata.k141_3680256                           C 0 I 6
s Macaca_siberu.k141_741907                                 19650  8 -     55006 CCA-TT--------T-TG
i Macaca_siberu.k141_741907                             C 0 I 6
s Macaca_silenus.Contig12                                43844765  8 +  43892939 CCA-TT--------T-TG
i Macaca_silenus.Contig12                               C 0 I 6
s Macaca_thibetana.k99_662710                               20933  8 -     24607 CCA-TT--------T-TG
i Macaca_thibetana.k99_662710                           C 0 I 6
s Macaca_tonkeana.k141_2870633                               8304  8 -     27140 CCA-TT--------T-TG
i Macaca_tonkeana.k141_2870633                          C 0 I 6
s Mandrillus_leucophaeus.scaffold125                     43441340  8 -  43563597 CCA-TT--------T-TG
i Mandrillus_leucophaeus.scaffold125                    C 0 I 6
s Mandrillus_sphinx.Contig144                             4454144  8 -   4543643 CCA-TT--------T-TG
i Mandrillus_sphinx.Contig144                           C 0 I 6
s Manis_javanica.JSZB01003966.1                            149344 13 +    252755 cca-tttt-gacata---
i Manis_javanica.JSZB01003966.1                         C 0 I 1
s Manis_pentadactyla.KN017078.1                             39492 13 +     58827 cca-tttt-gactta---
i Manis_pentadactyla.KN017078.1                         C 0 I 1
s Marmota_marmota.CZRN01000005.1                         36877936  8 +  64221397 tcc-gt--------t-tg
i Marmota_marmota.CZRN01000005.1                        I 131 I 7
s Megaderma_lyra.MegLyr_scaffold_3562                       65131  6 -    234502 CTA-TT--------T---
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 I 8
s Mellivora_capensis.MelCap_flattened_line_15433             6048  1 -     87323 --------------A---
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 I 1
s Meriones_unguiculatus.MerUng_scaffold_52233               15606  8 +     15977 AAT-TT--------t-tt
i Meriones_unguiculatus.MerUng_scaffold_52233           I 7 N 0
s Mesocricetus_auratus.KB708139.1                         1051228  8 -  26018355 cta-ta--------t-aa
i Mesocricetus_auratus.KB708139.1                       I 7 I 5
s Mesoplodon_bidens.MesBid_scaffold_96348                    2123  7 -     12939 CCA-TT-------TT---
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16514161  8 +  47401472 CCA-TT--------T-Tg
i Microcebus_murinus.CM007691.1                         C 0 I 6
s Microgale_talazaci.MicTal_scaffold_34660                  41192  7 -     48017 TAA-TT-------TT---
i Microgale_talazaci.MicTal_scaffold_34660              C 0 I 8
s Microtus_ochrogaster.CM001673.1                        22823914  8 -  98408828 CTA-TT--------T-AA
i Microtus_ochrogaster.CM001673.1                       I 5 I 5
s Miopithecus_ogouensis.k141_2935907                         5886  8 +     29742 CCA-TT--------T-TG
i Miopithecus_ogouensis.k141_2935907                    C 0 I 6
s Mirounga_angustirostris.MirAng_flattened_line_8852        16649  1 -    104932 --------------A---
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 I 1
s Mirza_zaza.k141_593947                                     4843  8 -     12809 CGA-TT--------T-TG
i Mirza_zaza.k141_593947                                C 0 I 6
s Monodon_monoceros.MonMon_M_scaffold_5598                 149915  7 +    154973 CCA-TT-------TT---
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  5926  7 -     19904 CCA-TT-------TT---
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  150047  1 -    168139 --------------A---
i Mungos_mungo.MunMun_flattened_line_8729               C 0 I 1
s Mus_caroli.LT608236.1                                  70771533  8 +  92629107 ata-tt--------t-at
i Mus_caroli.LT608236.1                                 I 7 I 5
s Mus_musculus.chr16                                     75493586  8 +  98207768 ata-tt--------t-at
i Mus_musculus.chr16                                    I 7 I 5
s Mus_pahari.LT608305.1                                  67559963  8 +  89017189 ata-tt--------t-aa
i Mus_pahari.LT608305.1                                 I 7 I 5
s Mus_spretus.CM004110.1                                 74336313  8 +  97876770 ata-tt--------t-at
i Mus_spretus.CM004110.1                                I 7 I 5
s Mustela_putorius.JH417978.1                             4427891  1 -  28371801 --------------a---
i Mustela_putorius.JH417978.1                           C 0 I 1
s Nannospalax_galili.KL201303.1                            119903  8 +    362372 CCa-tt--------t-ag
i Nannospalax_galili.KL201303.1                         I 7 I 166
s Neomonachus_schauinslandi.NINY01007774.1                4490048  1 -  14209539 --------------a---
i Neomonachus_schauinslandi.NINY01007774.1              C 0 I 1
s Neophocaena_asiaeorientalis.KZ688543.1                  3954506  7 -   4490290 cca-ttt-------t---
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Nomascus_annamensis.k141_1817463                            575  8 -      1070 CCA-TT--------T-TG
i Nomascus_annamensis.k141_1817463                      C 0 I 6
s Nomascus_concolor.k141_70405                                575  8 +      1153 CCA-TT--------T-TG
i Nomascus_concolor.k141_70405                          C 0 I 6
s Nomascus_gabriellae.k141_1400361                            506  8 -      2203 CCA-TT--------T-TG
i Nomascus_gabriellae.k141_1400361                      C 0 I 6
s Nomascus_siki_b.tarseq_1022                             529  8 -     11638 CCA-TT--------T-TG
i Nomascus_siki_b.tarseq_1022                       C 0 I 6
s Nomascus_siki_a.k141_421408                                   419  8 +     16235 CCA-TT--------T-TG
i Nomascus_siki_a.k141_421408                             I 11 I 13
s Nycticebus_bengalensis.LG16                            65571527  8 -  95554990 CCA-TT--------T-TG
i Nycticebus_bengalensis.LG16                           C 0 I 6
s Nycticebus_coucang.k141_771591                            14936  8 +     16181 CCA-TT--------T-TG
i Nycticebus_coucang.k141_771591                        C 0 I 6
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65679738  8 +  89412551 cca-tt--------t-tg
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 I 6
s Ochotona_princeps.JH802095.1                            4998941  4 -  23139505 -----t--------t-ta
i Ochotona_princeps.JH802095.1                          I 6 I 5
s Odobenus_rosmarus.KB229369.1                             684750  1 -   3126709 --------------a---
i Odobenus_rosmarus.KB229369.1                          C 0 I 1
s Odocoileus_virginianus.KZ101650.1                       1083358  7 +   1425656 caa-ttt-------t---
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         41441  7 +     78940 cca-ttt-------t---
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  130104  8 +    145789 CTA-TT--------T-CA
i Ondatra_zibethicus.OndZib_scaffold_6821               I 5 I 5
s Onychomys_torridus.OnyTor_scaffold_12578                  42794  8 +     62360 CTA-TT--------T-AA
i Onychomys_torridus.OnyTor_scaffold_12578              I 9 I 5
s Orcinus_orca.KB316965.1                                 7228182  7 -   7562323 cca-ttt-------t---
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              63962  6 -     66828 CTA-TT--------T---
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 I 8
s Oryctolagus_cuniculus.CM000803.1                      141881492  4 + 163896628 -----t--------t-ta
i Oryctolagus_cuniculus.CM000803.1                      I 6 I 5
s Otolemur_crassicaudatus.k141_505435                        4876  8 -     53940 CCA-TT--------T-TG
i Otolemur_crassicaudatus.k141_505435                   C 0 I 6
s Otolemur_garnettii.GL873528.1                          18012849  8 -  38779656 cca-tt--------t-tg
i Otolemur_garnettii.GL873528.1                         C 0 I 6
s Ovis_aries.CM001582.2                                 134082370  7 - 275406953 cca-ttt-------t---
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      83598  7 +    140051 CCA-TT-------TT---
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127578249  8 - 205426864 cca-tt--------t-tg
i Pan_paniscus.CM003386.1                               C 0 I 6
s Pan_troglodytes.CM009241.2                            120155409  8 - 196562556 cca-tt--------t-tg
i Pan_troglodytes.CM009241.2                            C 0 I 6
s Panthera_onca.PanOnc_flattened_line_1615                  39652  1 +    295523 --------------A---
i Panthera_onca.PanOnc_flattened_line_1615              C 0 I 1
s Panthera_pardus.KV860323.1                              3643467  1 +  18214204 --------------a---
i Panthera_pardus.KV860323.1                            C 0 I 1
s Panthera_tigris.KE721879.1                              5033115  1 -   6340057 --------------a---
i Panthera_tigris.KE721879.1                            C 0 I 1
s Pantholops_hodgsonii.KE114631.1                         1071239  7 -   1292953 cca-ttt-------t---
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188160129  8 - 188283584 CCA-TT--------T-TG
i Papio_anubis.CM001492.2                               C 0 I 6
s Papio_cynocephalus.k141_45376                              3219  8 +     25005 CCA-TT--------T-TG
i Papio_cynocephalus.k141_45376                         C 0 I 6
s Papio_hamadryas.Contig15                               47517501  8 +  47705337 CCA-TT--------T-TG
i Papio_hamadryas.Contig15                              C 0 I 6
s Papio_kindae.k141_5458022                                 71492  8 -    104429 CCA-TT--------T-TG
i Papio_kindae.k141_5458022                             C 0 I 6
s Papio_papio.k141_979496                                   10024  8 +     14967 CCA-TT--------T-TG
i Papio_papio.k141_979496                               C 0 I 6
s Papio_ursinus.k141_1345919                                 5889  8 -      7628 CCA-TT--------T-TG
i Papio_ursinus.k141_1345919                            C 0 I 6
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    121143  1 -    135482 --------------A---
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 I 1
s Perodicticus_ibeanus.k141_117958                          10546  8 -     23713 CCA-TT--------T-TG
i Perodicticus_ibeanus.k141_117958                      C 0 I 6
s Perodicticus_potto.k141_1136815                           11686  8 +     61070 CCA-TT--------T-TG
i Perodicticus_potto.k141_1136815                       C 0 I 6
s Perognathus_longimembris.PerPac_flattened_line_19359       1689  8 +     49596 TCT-TC--------T-TG
i Perognathus_longimembris.PerPac_flattened_line_19359  I 7 I 286
s Peromyscus_maniculatus.KI615518.1                       4955161  8 -   8017169 cta-tt--------t-aa
i Peromyscus_maniculatus.KI615518.1                     I 7 I 5
s Petromus_typicus.PetTyp_scaffold_33007                    17021  8 -     36578 CCA-TT--------T-TG
i Petromus_typicus.PetTyp_scaffold_33007                I 7 I 5
s Phocoena_phocoena.PhoPho_flattened_line_53071              2647  7 +      8220 CCA-TT-------TT---
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           9118  7 +     21690 CCA-TT-------TT---
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       25823  8 +     44506 CCA-TT--------T-TG
i Plecturocebus_bernhardi.k141_959214                   C 0 I 6
s Plecturocebus_brunneus.k141_498086                        26036  8 +     67491 CCA-TT--------T-TG
i Plecturocebus_brunneus.k141_498086                    C 0 I 6
s Plecturocebus_caligatus.k141_2539816                      16275  8 -     98129 CCA-TT--------T-TG
i Plecturocebus_caligatus.k141_2539816                  C 0 I 6
s Plecturocebus_cinerascens.k141_744510                     25875  8 +    147771 CCA-TT--------T-TG
i Plecturocebus_cinerascens.k141_744510                 C 0 I 6
s Plecturocebus_cupreus.k141_1145860                         2511  8 -     43940 CCA-TT--------T-TG
i Plecturocebus_cupreus.k141_1145860                    C 0 I 6
s Plecturocebus_dubius.k141_3565563                          6594  8 -     55515 CCA-TT--------T-TG
i Plecturocebus_dubius.k141_3565563                     C 0 I 6
s Plecturocebus_grovesi.k141_242819                         25948  8 +    152463 CCA-TT--------T-TG
i Plecturocebus_grovesi.k141_242819                     C 0 I 6
s Plecturocebus_hoffmannsi.k141_985533                       3756  8 -    119457 CCA-TT--------T-TG
i Plecturocebus_hoffmannsi.k141_985533                  C 0 I 6
s Plecturocebus_miltoni.k141_841561                         15671  8 +    134592 CCA-TT--------T-TG
i Plecturocebus_miltoni.k141_841561                     C 0 I 6
s Plecturocebus_moloch.k141_890597                          26258  8 -     75465 CCA-TT--------T-TG
i Plecturocebus_moloch.k141_890597                      C 0 I 6
s Pongo_abelii.NDHI03003816.1                              190872  8 -    373494 CCA-TT--------T-TG
i Pongo_abelii.NDHI03003816.1                           C 0 I 6
s Pongo_pygmaeus.ctg62                                   19811519  8 +  19899266 CCA-TT--------T-TG
i Pongo_pygmaeus.ctg62                                  C 0 I 6
s Procavia_capensis.ProCapCap_scaffold_149274                3670  4 -      9567 CCT-T-------------
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 I 5
s Prolemur_simus.MPIZ01000048.1                           6852472  8 +  12164890 cca-tt--------t-tg
i Prolemur_simus.MPIZ01000048.1                         C 0 I 6
s Propithecus_coquerelli.NW_012147863.1                     21502  8 -     30946 CCA-TT--------T-TG
i Propithecus_coquerelli.NW_012147863.1                 C 0 I 6
s Propithecus_coronatus.k141_1353159                         7558  8 +     11805 CCA-TT--------T-TG
i Propithecus_coronatus.k141_1353159                    C 0 I 6
s Propithecus_diadema.k141_577245                           46906  8 +     52369 CCA-TT--------T-TG
i Propithecus_diadema.k141_577245                       C 0 I 6
s Propithecus_edwardsi.k141_1317105                         39293  8 -     44753 CCA-TT--------T-TG
i Propithecus_edwardsi.k141_1317105                     C 0 I 6
s Propithecus_perrieri.k141_7554                            21216  8 +     27322 CCA-TT--------T-TG
i Propithecus_perrieri.k141_7554                        C 0 I 6
s Propithecus_tattersalli.k141_907138                       20850  8 -     53241 CCA-TT--------T-TG
i Propithecus_tattersalli.k141_907138                   C 0 I 6
s Propithecus_verreauxi.k141_158021                         43114  8 -     48185 CCA-TT--------T-TG
i Propithecus_verreauxi.k141_158021                     C 0 I 6
s Psammomys_obesus.NESX01026517.1                           37957  8 +     77221 aaa-tt--------t-aa
i Psammomys_obesus.NESX01026517.1                       I 7 I 5
s Pteronura_brasiliensis.PteBra_flattened_line_1343        250012  1 -    344369 --------------A---
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 I 1
s Puma_concolor.QAVW01000427.1                          131539763  1 - 161321710 --------------a---
i Puma_concolor.QAVW01000427.1                          C 0 I 1
s Rangifer_tarandus.RanTarSib_scaffold_24239                20222  7 +     68503 CAA-TT-------TT---
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13917372  8 +  90463843 ata-tt--------t-aa
i Rattus_norvegicus.chr11                               I 7 I 5
s Rhinolophus_sinicus.LVEH01000179.1                      1792325  6 +   2252614 tca-tt--------t---
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 I 8
s Saiga_tatarica.SaiTat_scaffold_1069354                      218  7 -       709 cca-ttt-------t---
i Saiga_tatarica.SaiTat_scaffold_1069354                C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15676281  8 -  43202129 gca-tt--------t-ta
i Saimiri_boliviensis.NW_024100938.1                    C 0 I 6
s Saimiri_cassiquiarensis.k141_808270                        8194  8 +     34089 GCA-TT--------T-TA
i Saimiri_cassiquiarensis.k141_808270                   C 0 I 6
s Saimiri_macrodon.k141_2087127                              8134  8 -     60842 GCA-TT--------T-TA
i Saimiri_macrodon.k141_2087127                         C 0 I 6
s Saimiri_oerstedii.k141_841116                              8228  8 +     67014 GCA-TT--------T-TA
i Saimiri_oerstedii.k141_841116                         C 0 I 6
s Saimiri_sciureus.k141_1947592                              8205  8 +     60816 GCA-TT--------T-TA
i Saimiri_sciureus.k141_1947592                         C 0 I 6
s Saimiri_ustus.k141_1282476                                 8142  8 -     76454 GCA-TT--------T-TA
i Saimiri_ustus.k141_1282476                            C 0 I 6
s Sapajus_apella.ctg10                                   17344929  8 -  30362882 CCA-TT--------T-TG
i Sapajus_apella.ctg10                                  C 0 I 6
s Sapajus_macrocephalus.k141_966464                         24250  8 -     62485 CCA-TT--------T-TG
i Sapajus_macrocephalus.k141_966464                     C 0 I 6
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   39369  3 -    114521 TCA---------------
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  104725  8 -    120886 GTA-TT--------T-AA
i Sigmodon_hispidus.SigHis_scaffold_11332               I 7 I 5
s Solenodon_paradoxus.SolPar_flattened_line_1012            23292  6 +    739146 TCA-GT--------T---
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17769749  6 -  27805282 ACC-TT--------T---
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2243772  8 +   2842873 tcc-tt--------t-tg
i Spermophilus_dauricus.KZ294190.1                      I 32 I 7
s Spilogale_gracilis.SpiGra_flattened_line_905             238534  1 -    276980 --------------a---
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 I 1
s Suricata_suricatta.SurSur_flattened_line_20339            32717  1 +     62062 --------------A---
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 I 1
s Symphalangus_syndactylus.tarseq_24                        18542  8 -  13920577 CCA-TT--------T-TG
i Symphalangus_syndactylus.tarseq_24                    C 0 I 6
s Tapirus_indicus.TapInd_scaffold_176                      810509 13 +   1148477 TCA-TT-TTGACCTT---
i Tapirus_indicus.TapInd_scaffold_176                   C 0 I 1
s Tapirus_terrestris.TapTer_scaffold_14939                  61151 13 +     99546 TCA-TT-TTGACCTT---
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 I 1
s Tarsius_lariang.k141_609102                               31095  9 +     42269 GTATTT--------T-TT
i Tarsius_lariang.k141_609102                           C 0 I 6
s Tarsius_wallacei.k141_48636                               64404  9 +     65473 CTATTT--------T-TT
i Tarsius_wallacei.k141_48636                           C 0 I 6
s Theropithecus_gelada.CM009951.1                       194011662  8 - 194193292 CCA-TT--------T-TG
i Theropithecus_gelada.CM009951.1                       C 0 I 6
s Tragulus_javanicus.TraJav_scaffold_14717                   9254  7 +     90398 CCA-TT-------TT---
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16089556  6 +  31416278 cca-tt--------t---
i Trichechus_manatus.JH594618.1                         C 0 I 8
s Tupaia_chinensis.KB320831.1                             2797488  8 -   3938065 gta-tt--------t-tt
i Tupaia_chinensis.KB320831.1                           C 0 I 6
s Tupaia_tana.TupTan_flattened_line_68454                    9419  6 +     13056 --A-TT--------T-TT
i Tupaia_tana.TupTan_flattened_line_68454               C 0 I 6
s Tursiops_truncatus.MRVK01000923.1                      69316911  7 -  96451834 cca-ttt-------t---
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Ursus_maritimus.KK498671.1                              6520224  1 +  28682327 --------------a---
i Ursus_maritimus.KK498671.1                            C 0 I 1
s Uropsilus_gracilis.UroGra_scaffold_69449                   9898  3 +     10241 TCA---------------
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Varecia_rubra.k141_432109                                  9114  8 -     20643 CCA-TT--------T-TG
i Varecia_rubra.k141_432109                             C 0 I 6
s Varecia_variegata.k141_775891                             28649  8 -     33872 CCA-TT--------T-TG
i Varecia_variegata.k141_775891                         C 0 I 6
s Vicugna_pacos.KN269600.1                                1527944  7 -   2331223 cca-ttt-------t---
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       131268  9 -    134049 TCCATT--------T-TG
i Xerus_inauris.XerIna_scaffold_7898                    I 2868 I 7
s Zalophus_californianus.ZalCal_flattened_line_4097        219602  1 -    227762 --------------a---
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 I 1
s Zapus_hudsonius.ZapHud_scaffold_256618                      210  8 -      2259 cca-tt--------t-tg
i Zapus_hudsonius.ZapHud_scaffold_256618                I 7 I 5
s Ziphius_cavirostris.ZipCav_flattened_line_60625            1655  7 -     13665 CCa-ttt-------t---
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Eptesicus_fuscus.JH977687.1                             4708429 237 +   6522550 I
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Dinomys_branickii.DinBra_scaffold_1996                   158442 1030 +    228994 I
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           4051 456 -      6963 I
e Vulpes_lagopus.VulLag_flattened_line_2045                144154  0 -    281493 C
e Tonatia_saurophila.TonSau_scaffold_3334                  137563 275 -    259118 I
e Tamandua_tetradactyla.TamTet_scaffold_26877               16259 379 +     45698 I
e Tadarida_brasiliensis.TadBra_scaffold_61492                1822 242 +     20549 I
e Sus_scrofa.CM000824.4                                 189273670 1086 + 218635234 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Pteronotus_parnellii.KE867983.1                            5588 252 -     27784 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Otocyon_megalotis.JAEUCK010005121.1                      314927  0 -    505867 C
e Nyctereutes_procyonoides.CAJHUB010000786.1                37788  0 +   3668941 C
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             6589 379 -      8794 I
e Myotis_myotis.MyoMyo_scaffold_6123                        13515 236 +     66751 I
e Myotis_lucifugus.GL429887.1                             3468272 238 -   3747815 I
e Myotis_davidii.KB114863.1                               5022194 233 +   6462685 I
e Myotis_brandtii.KE161952.1                               970769 237 +   8389877 I
e Murina_feae.MurFea_scaffold_2254                          23900 236 -    100666 I
e Mormoops_blainvillei.MorMeg_scaffold_2952                162937 259 +    265003 I
e Miniopterus_schreibersii.MinSch_scaffold_24116            36998 214 +     45743 I
e Miniopterus_natalensis.LDJU01000022.1                   8212509 213 +  10048721 I
e Micronycteris_hirsuta.MicHir_scaffold_37978               24387 274 -     32043 I
e Lycaon_pictus.CM007556.1                               11094924  0 +  39895028 C
e Lasiurus_borealis.LasBor_scaffold_59542                    5042 241 +     26176 I
e Hyaena_hyaena.HyaHya_flattened_line_20729                 22964  0 -     67322 C
e Elephantulus_edwardii.JH947210.1                        7830035 1277 +  15467074 I
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Echinops_telfairi.JH980316.1                           22999931  2 -  44670279 I
e Desmodus_rotundus.KZ672188.1                           18700517 262 -  18957592 I
e Dasypus_novemcinctus.JH568778.1                          185121 383 -   6883506 I
e Choloepus_hoffmanni.KN194586.1                           763329 503 +    964067 I
e Choloepus_didactylus.ChoDid_scaffold_36182                18024 504 -     21363 I
e Carollia_perspicillata.CarPer_scaffold_4436               61226 261 +     67245 I
e Canis_lupus_orion.HG994411.1                           16462253  0 -  44759192 C
e Canis_lupus_familiaris.chr31                           11095468  0 +  39895921 C
e Canis_lupus_dingo.QKWQ01001993.1                       11272757  0 -  35597290 C
e Canis_lupus_VD.CanFam_VD_scaffold_16982                   21048  0 +     87036 C
e CanFam4.chr31                                          11526074  0 +  39901454 C
e Artibeus_jamaicensis.ArtJam_scaffold_41619                10440 261 -     29036 I
e Anoura_caudifer.AnoCau_scaffold_422                      392020 257 -    631301 I
e Glis_glis.GliGli_scaffold_79770                           16025 88 -     18683 I
e Trachypithecus_pileatus.k141_1022309                       5226  0 +     13828 C
e Trachypithecus_phayrei.ctg3                            44662914  0 -  44834318 C
e Trachypithecus_obscurus.k141_1115109                       8130  0 -     28054 C
e Trachypithecus_melamera.k141_699241                        2986  0 -     24393 C
e Trachypithecus_leucocephalus.k141_381681                   3005  0 +     12481 C
e Trachypithecus_laotum.k141_760702                          4719  0 +     14371 C
e Trachypithecus_hatinhensis.k141_504423                     6067  0 -     15592 C
e Trachypithecus_germaini.k141_868450                        3883  0 -     11566 C
e Trachypithecus_geei.k141_670367                           46082  0 -     54611 C
e Trachypithecus_francoisi.k141_768164                       4689  0 -     14244 C
e Trachypithecus_cristatus.k141_1011511                      5261  0 -     12939 C
e Trachypithecus_crepusculus.k141_1588528                   23360  0 -     32910 C
e Trachypithecus_auratus.k141_738098                        29800  0 +     38948 C
e Semnopithecus_vetulus.k141_1143185                        16479  0 +     30600 C
e Semnopithecus_schistaceus.k141_387461                     33457  0 +     42640 C
e Semnopithecus_priam.k141_410937                           40312  0 +     46263 C
e Semnopithecus_johnii.k141_785014                         121532  0 +    130994 C
e Semnopithecus_hypoleucos.k141_761524                      11528  0 +     20762 C
e Semnopithecus_entellus.k141_1572367                        6153  0 +     15331 C
e Rhinopithecus_strykeri.ctg4                            44859307  0 -  45163003 C
e Rhinopithecus_bieti.k119_554384                            2917  0 -     17045 C
e Pygathrix_nigripes_a.k141_101123                             8537  0 +     18040 C
e Pygathrix_nigripes_b.ctg79                                 6809148  0 +   6970761 C
e Pygathrix_cinerea.k141_374971                             32651  0 +     56732 C
e Presbytis_mitrata.k141_860013                              8661  0 +     14865 C
e Presbytis_comata.k141_672698                               8546  0 -     15069 C
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000036.1               26743271  0 +  26888534 C
e Piliocolobus_kirkii.k141_929665                            4788  0 +      7694 C
e Piliocolobus_gordonorum.k141_1270531                       5421  0 -     17985 C
e Piliocolobus_badius.k141_1987485                           4802  0 -      5908 C
e Octodon_degus.JH651621.1                                3687420 1881 +  10294119 I
e Nasalis_larvatus.k141_153429                              11264  0 +     48152 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     91920 1922 -    117718 I
e Muscardinus_avellanarius.MusAve_scaffold_9643             14564 52 +     98495 I
e Hystrix_cristata.HysCri_scaffold_50788                     7688 1865 +     22540 I
e Graphiurus_murinus.GraMur_scaffold_4493                   79416 85 +    118900 I
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 32592 1717 -     67205 I
e Colobus_polykomos.k141_1406057                            19335  0 +     23629 C
e Colobus_guereza.LG08                                  147667351  0 + 156195979 C
e Colobus_angolensis.KN985967.1                          10889423  0 +  10971483 C
e Chinchilla_lanigera.JH721867.1                         15963245 964 +  43084221 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               17280  7 +    209709 a----------------------------a-------ttt----at
s Acinonyx_jubatus.LLWD01000356.1                         2039240  7 +   3721120 a----------------------------c-------aaa----ca
i Acinonyx_jubatus.LLWD01000356.1                       I 1 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    117482  7 -    189883 A----------------------------A-------TTT----TA
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 5 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10662928 11 +  23371972 a----------------------------t-------aaatagata
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 1 C 0
s Ailurus_fulgens.LNAC01000003.1                          7099709 18 -  16596857 tta-a-a--ta-a-ata-a----------t-------aaa----ca
i Ailurus_fulgens.LNAC01000003.1                        I 1 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   21453  7 -     22067 A----------------------------A-------ATG----TA
i Allactaga_bullata.AllBul_scaffold_70162               I 5 C 0
s Allenopithecus_nigroviridis.k141_2469532                   5152  7 -     60446 A----------------------------A-------TTT----AT
i Allenopithecus_nigroviridis.k141_2469532              I 6 C 0
s Allochrocebus_lhoesti.k141_3566948                         5868  7 -     29318 A----------------------------A-------TTT----AT
i Allochrocebus_lhoesti.k141_3566948                    I 6 I 1
s Allochrocebus_preussi.k141_1108977                         4807  7 +     38766 A----------------------------A-------TTT----AT
i Allochrocebus_preussi.k141_1108977                    I 6 C 0
s Allochrocebus_solatus.k141_371672                          5763  7 -     80423 A----------------------------A-------TTT----AT
i Allochrocebus_solatus.k141_371672                     I 6 C 0
s Alouatta_belzebul.k141_276091                               735  7 +     19852 A----------------------------A-------TTT----AT
i Alouatta_belzebul.k141_276091                         I 6 C 0
s Alouatta_caraya.k141_664908                                2991  7 -     12443 A----------------------------A-------TTT----AT
i Alouatta_caraya.k141_664908                           I 6 C 0
s Alouatta_discolor.k141_2023149                              290  7 +      5070 A----------------------------A-------TTT----AT
i Alouatta_discolor.k141_2023149                        I 6 C 0
s Alouatta_juara.k141_799181                                   35  7 -      1641 A----------------------------A-------TTT----AT
i Alouatta_juara.k141_799181                            I 6 C 0
s Alouatta_macconnelli.k141_2318944                          2774  7 -     24210 A----------------------------A-------TTT----AT
i Alouatta_macconnelli.k141_2318944                     I 6 C 0
s Alouatta_nigerrima.k141_2187093                           29356  7 -     30219 A----------------------------A-------TTT----AT
i Alouatta_nigerrima.k141_2187093                       I 6 C 0
s Alouatta_palliata.k141_405616                              5192  7 +     16794 A----------------------------A-------TTT----AT
i Alouatta_palliata.k141_405616                         I 6 C 0
s Alouatta_puruensis.k141_1602819                             324  7 -      1470 A----------------------------A-------TTT----AT
i Alouatta_puruensis.k141_1602819                       I 6 C 0
s Alouatta_seniculus.k141_790278                             4469  7 -      9835 A----------------------------A-------TTT----AT
i Alouatta_seniculus.k141_790278                        I 6 C 0
s Ammotragus_lervia.NIVO01013474.1                        3525237  7 +   4113121 g----------------------------a-------ctt----ta
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             2668  7 +     55446 G----------------------------A-------CGT----TA
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 66082  7 +     78111 A----------------------------A-------TTT----GT
i Aotus_azarae.k141_3170768                             I 6 C 0
s Aotus_griseimembra.k141_3275623                            9028  7 +     22701 A----------------------------A-------TTT----GT
i Aotus_griseimembra.k141_3275623                       I 6 C 0
s Aotus_nancymaae.KZ196176.1                              5752986  7 +   9889416 a----------------------------a-------ttt----gt
i Aotus_nancymaae.KZ196176.1                            I 6 C 0
s Aotus_trivirgatus.k141_1740727                             9584  7 -    104377 A----------------------------A-------TTT----GT
i Aotus_trivirgatus.k141_1740727                        I 6 C 0
s Aotus_vociferans.k141_718647                               9591  7 +     23246 A----------------------------A-------TTT----GT
i Aotus_vociferans.k141_718647                          I 6 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     2103  7 +     11424 A----------------------------T-------ATT----TA
i Aplodontia_rufa.AprRuf_scaffold_101456                I 7 C 0
s Arctocebus_calabarensis.k141_587554                        6189  7 +      9265 A----------------------------A-------GTT----TT
i Arctocebus_calabarensis.k141_587554                   I 6 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9542877  7 +  39197703 A----------------------------A-------TTT----AT
i Ateles_geoffroyi_b.tarseq_2582                           I 6 C 0
s Ateles_belzebuth.k141_1348307                             64150  7 +     85812 A----------------------------A-------TTT----AT
i Ateles_belzebuth.k141_1348307                         I 6 C 0
s Ateles_chamek.k141_1072810                                15163  7 +     89302 A----------------------------A-------TTT----AT
i Ateles_chamek.k141_1072810                            I 6 C 0
s Ateles_geoffroyi_a.k141_1300742                             19664  7 -     58268 A----------------------------A-------TTT----AT
i Ateles_geoffroyi_a.k141_1300742                         I 6 C 0
s Ateles_marginatus.k141_899112                             67658  7 +    119057 A----------------------------A-------TTT----AT
i Ateles_marginatus.k141_899112                         I 6 C 0
s Ateles_paniscus.k141_1631200                               9627  7 -     25888 A----------------------------A-------TTT----AT
i Ateles_paniscus.k141_1631200                          I 6 C 0
s Avahi_laniger.k141_2840928                                10667  7 -     16375 A----------------------------A-------TTT----TT
i Avahi_laniger.k141_2840928                            I 6 C 0
s Avahi_peyrierasi.k141_798820                               4283  7 +      6337 A----------------------------A-------TTT----TT
i Avahi_peyrierasi.k141_798820                          I 6 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26383704  7 +  51448160 g----------------------------a-------ctt----ca
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        8877  7 -     13118 g----------------------------a-------ctt----ca
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   47699  7 -     72089 G----------------------------A-------CGT----TA
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   301843  7 -   6870073 g----------------------------a-------ttt----ta
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22955941  7 + 161108492 G----------------------------A-------CTT----TA
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     418206  7 +    998990 G----------------------------A-------CTT----TA
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22664595  7 + 158972876 G----------------------------A-------CTT----TA
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               674358  7 +   1914593 G----------------------------A-------CTT----TA
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               117530  7 -    171031 A----------------------------A-------TTT----AT
i Cacajao_ayresi.k141_724503                            I 6 C 0
s Cacajao_calvus.k141_96166                                 16550  7 +    125063 A----------------------------A-------TTT----AT
i Cacajao_calvus.k141_96166                             I 6 C 0
s Cacajao_hosomi.k141_303789                                18597  7 -    216513 A----------------------------A-------TTT----AT
i Cacajao_hosomi.k141_303789                            I 6 C 0
s Cacajao_melanocephalus.k141_1160263                       11140  7 -    134917 A----------------------------A-------TTT----AT
i Cacajao_melanocephalus.k141_1160263                   I 6 C 0
s Camelus_bactrianus.KN276303.1                           3222841  7 -   8989139 g----------------------------a-------ctt----ta
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           400543  7 -  15254737 g----------------------------a-------ctt----ta
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2976279  7 +   6889770 g----------------------------a-------ctt----ta
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11526074  6 +  39901454 -----------------------------T-------AAA----TC
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   21048  6 +     87036 -----------------------------T-------AAA----TC
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11272757  6 -  35597290 -----------------------------T-------AAA----TC
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11095468  6 +  39895921 -----------------------------T-------AAA----TC
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16462253  6 -  44759192 -----------------------------T-------AAA----TC
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21330317  7 + 157394656 g----------------------------a-------ctt----ta
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135711534  7 - 157403528 g----------------------------a-------ctt----ta
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          313253  7 +    345090 a----------------------------a-------ttt----gt
i Carlito_syrichta.NW_007248099.1                       I 6 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   162397  7 -    276539 G----------------------------A-------CTT----TG
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15789389  7 -  24422027 N----------------------------N-------NNN----NN
i Cavia_aperea.AVPZ01000278.1                           I 5 C 0
s Cavia_porcellus.DS562889.1                             15801328  7 -  24440124 a----------------------------c-------ttt----ta
i Cavia_porcellus.DS562889.1                            I 5 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       179500  7 +    436027 A----------------------------C-------TTT----TA
i Cavia_tschudii.CavTsc_scaffold_488                    I 5 C 0
s Cebus_albifrons.Contig22                               18894362  7 -  29618158 a----------------------------a-------ttt----AT
i Cebus_albifrons.Contig22                              I 6 C 0
s Cebus_olivaceus.k141_93739                                11906  7 -     26817 A----------------------------A-------TTT----AT
i Cebus_olivaceus.k141_93739                            I 6 C 0
s Cebus_unicolor.k141_239009                                16150  7 +     25043 A----------------------------A-------TTT----AT
i Cebus_unicolor.k141_239009                            I 6 C 0
s Cephalopachus_bancanus.k141_702587                        12257  7 +     21754 A----------------------------A-------TTT----GT
i Cephalopachus_bancanus.k141_702587                    I 6 C 0
s Ceratotherium_simum.JH767818.1                          4367286  7 +   7569818 a----------------------------a-------ttt----ta
i Ceratotherium_simum.JH767818.1                        I 1 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         7043  7 -      9338 A----------------------------A-------TTT----TA
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    I 1 C 0
s Cercocebus_atys.KQ010443.1                              6559093  7 +   6739814 A----------------------------A-------TTT----AT
i Cercocebus_atys.KQ010443.1                            I 6 C 0
s Cercocebus_chrysogaster.k141_2328246                      30570  7 +     60454 A----------------------------A-------TTT----AT
i Cercocebus_chrysogaster.k141_2328246                  I 6 C 0
s Cercocebus_lunulatus.k141_4634644                          5774  7 -     21101 A----------------------------A-------TTT----AT
i Cercocebus_lunulatus.k141_4634644                     I 6 C 0
s Cercocebus_torquatus.k141_3969582                         63084  7 -    107033 A----------------------------A-------TTT----AT
i Cercocebus_torquatus.k141_3969582                     I 6 C 0
s Cercopithecus_ascanius.k141_4123525                        5945  9 -     17608 A----------------------------A-------TTT--TTAT
i Cercopithecus_ascanius.k141_4123525                   I 6 C 0
s Cercopithecus_cephus.k141_3893260                          3110  9 +     45019 A----------------------------A-------TTT--TTAT
i Cercopithecus_cephus.k141_3893260                     I 6 C 0
s Cercopithecus_diana.k141_2561715                           3172  7 +     15177 A----------------------------A-------TTT----AT
i Cercopithecus_diana.k141_2561715                      I 6 C 0
s Cercopithecus_hamlyni.k141_129805                          5994  7 +     16677 A----------------------------A-------TTT----AT
i Cercopithecus_hamlyni.k141_129805                     I 6 C 0
s Cercopithecus_lowei.k141_623764                           28182  9 +     35983 A----------------------------A-------TTT--TTAT
i Cercopithecus_lowei.k141_623764                       I 6 C 0
s Cercopithecus_albogularis.ctg51                              11994713  9 +  12117833 A----------------------------A-------TTT--TTAT
i Cercopithecus_albogularis.ctg51                             I 6 C 0
s Cercopithecus_mona.ctg12                               46481474  9 +  46592721 A----------------------------A-------TTT--TTAT
i Cercopithecus_mona.ctg12                              I 6 C 0
s Cercopithecus_neglectus.k141_2078027                      45025  7 -     45581 A----------------------------A-------TTT----AT
i Cercopithecus_neglectus.k141_2078027                  I 6 C 0
s Cercopithecus_nictitans.k141_1129315                       6006  9 +     35577 A----------------------------A-------TTT--TTAT
i Cercopithecus_nictitans.k141_1129315                  I 6 C 0
s Cercopithecus_petaurista.k141_64532                        5800  9 -     25661 A----------------------------A-------TTT--TTAT
i Cercopithecus_petaurista.k141_64532                   I 6 C 0
s Cercopithecus_pogonias.k141_3109732                        5758  7 -     17744 A----------------------------A-------TTT----AT
i Cercopithecus_pogonias.k141_3109732                   I 6 C 0
s Cercopithecus_roloway.k141_2263608                        25343  7 +     37128 A----------------------------A-------TTT----AT
i Cercopithecus_roloway.k141_2263608                    I 6 C 0
s Cheirogaleus_major.k141_1157592                           62893  7 -     68416 A----------------------------A-------TTT----TT
i Cheirogaleus_major.k141_1157592                       I 6 C 0
s Cheirogaleus_medius.k141_133808                           11994  7 +     13308 A----------------------------A-------TTT----TT
i Cheirogaleus_medius.k141_133808                       I 6 C 0
s Cheracebus_lucifer.k141_619653                             9188  7 -     18223 A----------------------------A-------TTT----AT
i Cheracebus_lucifer.k141_619653                        I 6 C 0
s Cheracebus_lugens.k141_996499                               927  7 +    188999 A----------------------------A-------TTT----AT
i Cheracebus_lugens.k141_996499                         I 6 C 0
s Cheracebus_regulus.k141_2128895                           45226  7 +     57117 A----------------------------A-------TTT----AT
i Cheracebus_regulus.k141_2128895                       I 6 C 0
s Cheracebus_torquatus.k141_315545                          49905  7 +     54541 A----------------------------A-------TTT----AT
i Cheracebus_torquatus.k141_315545                      I 6 C 0
s Chiropotes_israelita.k141_1189915                         74709  7 +    196370 A----------------------------A-------TTT----AT
i Chiropotes_israelita.k141_1189915                     I 6 C 0
s Chiropotes_sagulatus.k141_773804                          18890  7 +     40510 A----------------------------A-------TTT----AT
i Chiropotes_sagulatus.k141_773804                      I 6 C 0
s Chlorocebus_aethiops.ctg22                             15143528  7 -  15256731 A----------------------------A-------TTT----AT
i Chlorocebus_aethiops.ctg22                            I 6 C 0
s Chlorocebus_pygerythrus.k141_1486215                      37992  7 -     53260 A----------------------------A-------TTT----AT
i Chlorocebus_pygerythrus.k141_1486215                  I 6 C 0
s Chlorocebus_sabaeus.CM001963.2                        101148551  7 + 101219884 a----------------------------a-------ttt----at
i Chlorocebus_sabaeus.CM001963.2                        I 6 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_629495              1940  7 -      3120 A----------------------------A-------TTT----TA
i Chrysochloris_asiatica.ChrAsi_scaffold_629495         I 8 C 0
s Condylura_cristata.JH655880.1                          60621917  1 +  78930452 -----------------------------a----------------
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         1933  7 -      5782 t----------------------------a-------ttt----tg
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    I 478 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 282346  7 -    399297 C----------------------------A-------TTT----TA
i Cricetomys_gambianus.CriGam_scaffold_949              I 5 C 0
s Cricetulus_griseus.LT883672.1                          53034716  7 +  72327488 a----------------------------a-------ttt----ta
i Cricetulus_griseus.LT883672.1                         I 5 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              1332 12 -     22648 G-----------------------TCTAAA-------TTT----TG
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            57227 14 -     70449 A----------------------------TAAATAAATAA----CA
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 1 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  213712  7 -    956709 A----------------------------T-------TTT----TA
i Ctenodactylus_gundi.CteGun_scaffold_447               I 6 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                20561  7 +     26546 A----------------------------C-------TTT----TA
i Cuniculus_paca.CunPac_flattened_line_16637            I 5 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             61699  7 -    236241 A----------------------------A-------TTT----TA
i Dasyprocta_punctata.DasPun_flattened_line_634         I 5 C 0
s Daubentonia_madagascariensis.ctg11                     16848822  7 +  31942871 A----------------------------A-------TTT----TT
i Daubentonia_madagascariensis.ctg11                    I 6 C 0
s Delphinapterus_leucas.KZ290064.1                       80040329  7 -  96802777 g----------------------------a-------ctt----ta
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 325933  7 +    993696 a----------------------------a-------ttt----ta
i Dicerorhinus_sumatrensis.PEKH010003161.1              I 1 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   6574  7 +    151128 A----------------------------A-------TTT----TA
i Diceros_bicornis.DicBicMic_scaffold_9545              I 1 C 0
s Dipodomys_ordii.KN672545.1                              3659891  7 +   4240102 A----------------------------A-------TTT----TA
i Dipodomys_ordii.KN672545.1                            I 396 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  2239  7 -     11986 A----------------------------A-------TTT----TA
i Dipodomys_stephensi.DipSte_scaffold_84338             I 386 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                39668  7 -     73477 A----------------------------C-------TTT----TA
i Dolichotis_patagonum.DolPat_scaffold_14102            I 5 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1495915  7 +   1727528 g----------------------------a-------ttt----ta
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        243517  7 -    369425 A----------------------------C-------Ttt----ta
i Ellobius_lutescens.LOEQ01003611.1                     I 5 C 0
s Ellobius_talpinus.LOJH01198462.1                           1259  7 -      1901 A----------------------------C-------Ttt----ta
i Ellobius_talpinus.LOJH01198462.1                      I 5 C 0
s Enhydra_lutris.KZ291749.1                              85877163 35 +  99434291 atacatacatacatatatacataaacaaac-------aaa----ca
i Enhydra_lutris.KZ291749.1                             I 1 C 0
s Equus_asinus.JREZ01000062.1                             5856299  7 -   7175178 a----------------------------a-------ttt----tt
i Equus_asinus.JREZ01000062.1                           I 1 C 0
s Equus_caballus.CM000402.2                              13354799  7 +  41866177 a----------------------------a-------ttt----tt
i Equus_caballus.CM000402.2                             I 1 C 0
s Equus_przewalskii.ATBW01073585.1                          16289  7 +     92910 a----------------------------a-------ttt----tt
i Equus_przewalskii.ATBW01073585.1                      I 1 C 0
s Erinaceus_europaeus.JH835290.1                         11540752  7 +  16010500 A----------------------------A-------TTT----TA
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48780561  7 -  48907691 A----------------------------A-------TTT----AT
i Erythrocebus_patas.Contig8                            I 6 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          318547  7 +    330699 G----------------------------A-------CTT----TA
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             65004  7 +     89355 G----------------------------A-------CTT----TA
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              8976  7 +     13586 A----------------------------A-------TTT----TT
i Eulemur_albifrons.k141_715837                         I 6 C 0
s Eulemur_collaris.k141_1015201                              2239  7 -      4292 A----------------------------A-------TTT----TT
i Eulemur_collaris.k141_1015201                         I 6 C 0
s Eulemur_coronatus.k141_3240342                            15372  7 +     36558 A----------------------------A-------TTT----TT
i Eulemur_coronatus.k141_3240342                        I 6 C 0
s Eulemur_flavifrons.k141_903901                            11697  7 +     60246 A----------------------------A-------TTT----TT
i Eulemur_flavifrons.k141_903901                        I 6 C 0
s Eulemur_fulvus.k141_653297                                15180  7 +    109717 A----------------------------A-------TTT----TT
i Eulemur_fulvus.k141_653297                            I 6 C 0
s Eulemur_macaco.k141_747087                                 3165  7 -     19505 A----------------------------A-------TTT----TT
i Eulemur_macaco.k141_747087                            I 6 C 0
s Eulemur_mongoz.k141_825972                                19837  7 +     27497 A----------------------------A-------TTT----TT
i Eulemur_mongoz.k141_825972                            I 6 C 0
s Eulemur_rubriventer.k141_411740                           22293  7 +     26808 A----------------------------A-------TTT----TT
i Eulemur_rubriventer.k141_411740                       I 6 C 0
s Eulemur_rufus.k141_1620292                                37028  7 +     46535 A----------------------------A-------TTT----TT
i Eulemur_rufus.k141_1620292                            I 6 C 0
s Eulemur_sanfordi.k141_186399                              19767  7 -     29447 A----------------------------A-------TTT----TT
i Eulemur_sanfordi.k141_186399                          I 6 C 0
s Felis_catus.CM001386.2                                129898663 11 - 159252932 a----------------------------c---aaacaaa----ca
i Felis_catus.CM001386.2                                I 1 C 0
s Felis_catus_fca126.CM031420.1                         129285631 11 - 158578461 a----------------------------c---aaacaaa----ca
i Felis_catus_fca126.CM031420.1                         I 1 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 26730 11 +     52776 A----------------------------CAAA---CAAA----CA
i Felis_nigripes.FelNig_flattened_line_8080             I 1 C 0
s Fukomys_damarensis.KN123630.1                          13895844  7 -  19261668 a----------------------------t-------ttt----ta
i Fukomys_damarensis.KN123630.1                         I 5 C 0
s Galago_moholi.ctg555                                     215030  7 -    847004 A----------------------------A-------ATT----TT
i Galago_moholi.ctg555                                  I 7 C 0
s Galago_senegalensis.k141_964197                           17391  7 -     43889 A----------------------------A-------ATT----TT
i Galago_senegalensis.k141_964197                       I 7 C 0
s Galagoides_demidoff.k141_1769638                          14534  7 +     27357 A----------------------------A-------TTT----TT
i Galagoides_demidoff.k141_1769638                      I 6 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               159273  7 +    324696 A----------------------------A-------GTT----TT
i Galeopterus_variegatus.GalVar_scaffold_354            I 6 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    185713  7 -    189561 g----------------------------a-------ctt----ta
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           16113  3 -     18683 ---------------------------------------T----CA
i Glis_glis.GliGli_scaffold_79770                       I 88 C 0
s Gorilla_beringei.k141_111300                               8984  7 -     14630 A----------------------------A-------TTT----AT
i Gorilla_beringei.k141_111300                          I 6 C 0
s Gorilla_gorilla.LT578340.1                            119656084  7 - 195582420 A----------------------------A-------TTT----AT
i Gorilla_gorilla.LT578340.1                            I 6 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   79501  3 +    118900 ---------------------------------------T----AA
i Graphiurus_murinus.GraMur_scaffold_4493               I 85 C 0
s Hapalemur_alaotrensis.k141_1280836                         5760  7 +     10286 A----------------------------A-------TTT----TT
i Hapalemur_alaotrensis.k141_1280836                    I 6 C 0
s Hapalemur_gilberti.k141_279011                             4238  7 -     11661 A----------------------------A-------TTT----TT
i Hapalemur_gilberti.k141_279011                        I 6 C 0
s Hapalemur_griseus.k141_1387522                             9565  7 +     56096 A----------------------------A-------TTT----TT
i Hapalemur_griseus.k141_1387522                        I 6 C 0
s Hapalemur_meridionalis.k141_186231                        32814  7 -     42470 A----------------------------A-------TTT----TT
i Hapalemur_meridionalis.k141_186231                    I 6 C 0
s Hapalemur_occidentalis.k141_797938                        49440  7 -     54384 A----------------------------A-------TTT----TT
i Hapalemur_occidentalis.k141_797938                    I 6 C 0
s Helogale_parvula.HelPar_flattened_line_22962              22368 14 +     53719 A----------------------------TAAATAATAAA----CA
i Helogale_parvula.HelPar_flattened_line_22962          I 1 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                32587  7 -     91191 G----------------------------A-------CTT----TA
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2560363  7 +  31725842 a----------------------------c-------ttt----ta
i Heterocephalus_glaber.JH602058.1                      I 5 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               62573  7 +     73687 C----------------------------A-------TTT----TA
i Heterohyrax_brucei.HetBruBak_scaffold_25354           I 5 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              150327  7 +    277961 G----------------------------A-------CTC----CA
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      282739  7 -    477199 a----------------------------a-------ttt----ta
i Hipposideros_armiger.JXIK01001085.1                   I 8 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959                508  7 +     26078 A----------------------------A-------TTT----TA
i Hipposideros_galeritus.HipGal_scaffold_52959          I 8 C 0
s Hoolock_leuconedys.ctg315                                   349982  7 +    431944 A----------------------------A-------TTT----GT
i Hoolock_leuconedys.ctg315                                I 6 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 22964 14 -     67322 A----------------------------TAAGTAATAAA----CA
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           20956  7 -    119109 A----------------------------T-------TTT----TA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       I 5 C 0
s Hylobates_abbotti.k141_1816750                             1463  7 +      3202 A----------------------------A-------TTT----GT
i Hylobates_abbotti.k141_1816750                        I 6 C 0
s Hylobates_agilis.k141_1633646                              1433  7 -      2102 A----------------------------A-------TTT----GT
i Hylobates_agilis.k141_1633646                         I 6 C 0
s Hylobates_klossii.k141_468230                              2950  7 +      5464 A----------------------------A-------TTT----GT
i Hylobates_klossii.k141_468230                         I 6 C 0
s Hylobates_pileatus_b.ContigUN                                 14628298  7 -  25970782 A----------------------------A-------TTT----GT
i Hylobates_pileatus_b.ContigUN                                I 6 C 0
s Hylobates_muelleri.k141_1139146                             849  7 +      4161 A----------------------------A-------TTT----GT
i Hylobates_muelleri.k141_1139146                       I 6 C 0
s Hylobates_pileatus_a.tarseq_592                             35815  7 -     60944 t----------------------------t-------ttt----tt
i Hylobates_pileatus_a.tarseq_592                         I 6 I 591
s Ictidomys_tridecemlineatus.JH393315.1                   7130082  7 +  13083262 a----------------------------t-------ttt----ta
i Ictidomys_tridecemlineatus.JH393315.1                 I 7 C 0
s Indri_indri.k141_2197838                                   1239  7 +      3484 A----------------------------A-------TTT----TT
i Indri_indri.k141_2197838                              I 6 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              12541  7 +     17520 G----------------------------A-------CTT----TA
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8577137  7 +  11848649 A----------------------------A-------ATG----TA
i Jaculus_jaculus.JH725517.1                            I 5 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               27128  4 +     37189 g----------------------------g-------gc-------
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 I 184
s Lagothrix_lagothricha.k141_12968                          53746  7 -    147782 A----------------------------A-------TTT----AT
i Lagothrix_lagothricha.k141_12968                      I 6 C 0
s Lemur_catta.scaffold_1                                258411112  7 - 285822530 A----------------------------A-------TTT----TT
i Lemur_catta.scaffold_1                                I 6 C 0
s Lepilemur_ankaranensis.k141_884009                        28415  7 +     39228 A----------------------------A-------TGT----TT
i Lepilemur_ankaranensis.k141_884009                    I 6 C 0
s Lepilemur_dorsalis.k141_134267                            57779  7 +     63517 A----------------------------A-------TGT----TT
i Lepilemur_dorsalis.k141_134267                        I 6 C 0
s Lepilemur_ruficaudatus.k141_574529                        36159  7 -     38897 A----------------------------A-------TTT----TT
i Lepilemur_ruficaudatus.k141_574529                    I 6 C 0
s Lepilemur_septentrionalis.k141_710646                      2205  7 -     13103 A----------------------------A-------TGT----TT
i Lepilemur_septentrionalis.k141_710646                 I 6 C 0
s Leptonychotes_weddellii.KB714749.1                      3091155  7 -   3498232 a----------------------------t-------aaa----ta
i Leptonychotes_weddellii.KB714749.1                    I 1 C 0
s Lepus_americanus.LepAme_scaffold_62849                    18483  7 +     22452 t----------------------------t-------tct----ct
i Lepus_americanus.LepAme_scaffold_62849                I 5 C 0
s Lophocebus_aterrimus.ctg55                             19252181  7 +  19376315 A----------------------------A-------TTT----AT
i Lophocebus_aterrimus.ctg55                            I 6 C 0
s Loris_lydekkerianus.k141_550999                           14972  7 +     84689 A----------------------------A-------TTT----TT
i Loris_lydekkerianus.k141_550999                       I 6 C 0
s Loris_tardigradus.ctg97                                 3782711  7 +   6799190 A----------------------------A-------TTT----TT
i Loris_tardigradus.ctg97                               I 6 C 0
s Loxodonta_africana.GL010040.1                          20598493  7 -  62548349 a----------------------------a-------ttt----ta
i Loxodonta_africana.GL010040.1                         I 8 C 0
s Lycaon_pictus.CM007556.1                               11094924  6 +  39895028 -----------------------------T-------AAA----TC
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             23932  7 +     74745 A----------------------------A-------TTT----AT
i Macaca_arctoides.k141_2201161                         I 6 C 0
s Macaca_assamensis.Contig65                             12710393  7 +  12821369 A----------------------------A-------TTT----AT
i Macaca_assamensis.Contig65                            I 6 C 0
s Macaca_cyclopis.k119_883699                                2967  7 -     26467 A----------------------------A-------TTT----AT
i Macaca_cyclopis.k119_883699                           I 6 C 0
s Macaca_fascicularis.k141_155037                           50838  7 +     63263 A----------------------------A-------TTT----AT
i Macaca_fascicularis.k141_155037                       I 6 C 0
s Macaca_fuscata.k119_938422                                 2948  7 -     26361 A----------------------------A-------TTT----AT
i Macaca_fuscata.k119_938422                            I 6 C 0
s Macaca_leonina.k141_467472                                 6138  7 -      7381 A----------------------------A-------TTT----AT
i Macaca_leonina.k141_467472                            I 6 C 0
s Macaca_maura.k141_251854                                  49367  7 -     79256 A----------------------------A-------TTT----AT
i Macaca_maura.k141_251854                              I 6 C 0
s Macaca_mulatta.NC_041755.1                            196039465  7 + 196197964 A----------------------------A-------TTT----AT
i Macaca_mulatta.NC_041755.1                            I 6 C 0
s Macaca_nemestrina.KQ004885.1                           11449635  7 +  11645122 a----------------------------a-------ttt----at
i Macaca_nemestrina.KQ004885.1                          I 6 C 0
s Macaca_nigra.k141_282495                                   8321  7 -     46448 A----------------------------A-------TTT----AT
i Macaca_nigra.k141_282495                              I 6 C 0
s Macaca_radiata.k141_3680256                                5983  7 -     13212 A----------------------------A-------TTT----AT
i Macaca_radiata.k141_3680256                           I 6 C 0
s Macaca_siberu.k141_741907                                 19664  7 -     55006 A----------------------------A-------TTT----AT
i Macaca_siberu.k141_741907                             I 6 C 0
s Macaca_silenus.Contig12                                43844779  7 +  43892939 A----------------------------A-------TTT----AT
i Macaca_silenus.Contig12                               I 6 C 0
s Macaca_thibetana.k99_662710                               20947  7 -     24607 A----------------------------A-------TTT----AT
i Macaca_thibetana.k99_662710                           I 6 C 0
s Macaca_tonkeana.k141_2870633                               8318  7 -     27140 A----------------------------A-------TTT----AT
i Macaca_tonkeana.k141_2870633                          I 6 C 0
s Mandrillus_leucophaeus.scaffold125                     43441354  7 -  43563597 A----------------------------A-------TTT----AT
i Mandrillus_leucophaeus.scaffold125                    I 6 C 0
s Mandrillus_sphinx.Contig144                             4454158  7 -   4543643 A----------------------------A-------TTT----AT
i Mandrillus_sphinx.Contig144                           I 6 C 0
s Manis_javanica.JSZB01003966.1                            149358  7 +    252755 a----------------------------a-------ttt----ta
i Manis_javanica.JSZB01003966.1                         I 1 C 0
s Manis_pentadactyla.KN017078.1                             39506  7 +     58827 a----------------------------a-------ttt----ta
i Manis_pentadactyla.KN017078.1                         I 1 C 0
s Marmota_marmota.CZRN01000005.1                         36877951  7 +  64221397 a----------------------------t-------ttt----ta
i Marmota_marmota.CZRN01000005.1                        I 7 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       65145  7 -    234502 A----------------------------A-------TTG----CG
i Megaderma_lyra.MegLyr_scaffold_3562                   I 8 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             6050 31 -     87323 A----TACATACATACATAAACAAACAAAC-------AAA----CA
i Mellivora_capensis.MelCap_flattened_line_15433        I 1 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                  973  7 +    115071 A----------------------------A-------TTT----TA
i Meriones_unguiculatus.MerUng_scaffold_9483            N 0 C 0
s Mesocricetus_auratus.KB708139.1                         1051241  7 -  26018355 a----------------------------a-------ttt----ta
i Mesocricetus_auratus.KB708139.1                       I 5 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    2130  7 -     12939 G----------------------------A-------TTT----TA
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16514175  7 +  47401472 a----------------------------a-------ttt----tt
i Microcebus_murinus.CM007691.1                         I 6 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  41207  7 -     48017 A----------------------------C-------TTT----TA
i Microgale_talazaci.MicTal_scaffold_34660              I 8 C 0
s Microtus_ochrogaster.CM001673.1                        22823927  7 -  98408828 A----------------------------C-------TTT----TA
i Microtus_ochrogaster.CM001673.1                       I 5 C 0
s Miopithecus_ogouensis.k141_2935907                         5900  7 +     29742 A----------------------------A-------TTT----AT
i Miopithecus_ogouensis.k141_2935907                    I 6 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        16651  7 -    104932 A----------------------------T-------AAA----TA
i Mirounga_angustirostris.MirAng_flattened_line_8852    I 1 C 0
s Mirza_zaza.k141_593947                                     4857  7 -     12809 A----------------------------A-------TTT----TT
i Mirza_zaza.k141_593947                                I 6 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 149922  7 +    154973 G----------------------------A-------CTT----TA
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  5933  7 -     19904 G----------------------------A-------CTT----TA
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  150049 14 -    168139 A----------------------------TAAATAATAAA----CA
i Mungos_mungo.MunMun_flattened_line_8729               I 1 C 0
s Mus_caroli.LT608236.1                                  70771546  7 +  92629107 a----------------------------t-------ttt----ta
i Mus_caroli.LT608236.1                                 I 5 C 0
s Mus_musculus.chr16                                     75493599  7 +  98207768 a----------------------------t-------ttt----ta
i Mus_musculus.chr16                                    I 5 C 0
s Mus_pahari.LT608305.1                                  67559976  7 +  89017189 a----------------------------t-------ttt----ta
i Mus_pahari.LT608305.1                                 I 5 C 0
s Mus_spretus.CM004110.1                                 74336326  7 +  97876770 a----------------------------t-------ttt----ta
i Mus_spretus.CM004110.1                                I 5 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             14616  3 +     98495 ---------------------------------------a----ca
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 52 C 0
s Mustela_putorius.JH417978.1                             4427893 33 -  28371801 a--catacatacatatatacataaacaaac-------aaa----ca
i Mustela_putorius.JH417978.1                           I 1 C 0
s Nannospalax_galili.KL201303.1                            120077  7 +    362372 a----------------------------c-------ttt----ta
i Nannospalax_galili.KL201303.1                         I 166 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4490050  7 -  14209539 a----------------------------t-------aaa----ta
i Neomonachus_schauinslandi.NINY01007774.1              I 1 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3954513  7 -   4490290 g----------------------------a-------ctt----ta
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Nomascus_annamensis.k141_1817463                            589  7 -      1070 A----------------------------A-------TTT----GT
i Nomascus_annamensis.k141_1817463                      I 6 C 0
s Nomascus_concolor.k141_70405                                589  7 +      1153 A----------------------------A-------TTT----GT
i Nomascus_concolor.k141_70405                          I 6 C 0
s Nomascus_gabriellae.k141_1400361                            520  7 -      2203 A----------------------------A-------TTT----GT
i Nomascus_gabriellae.k141_1400361                      I 6 C 0
s Nomascus_siki_b.tarseq_1022                             543  7 -     11638 A----------------------------A-------TTT----GT
i Nomascus_siki_b.tarseq_1022                       I 6 C 0
s Nomascus_siki_a.k141_1035055                                 3175  7 -      3602 A----------------------------A-------TTT----GT
i Nomascus_siki_a.k141_1035055                            I 14 I 220
s Nyctereutes_procyonoides.CAJHUB010000786.1                37788  6 +   3668941 -----------------------------t-------aaa----ta
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65571541  7 -  95554990 A----------------------------A-------TTT----TT
i Nycticebus_bengalensis.LG16                           I 6 C 0
s Nycticebus_coucang.k141_771591                            14950  7 +     16181 A----------------------------A-------TTT----TT
i Nycticebus_coucang.k141_771591                        I 6 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65679752  7 +  89412551 a----------------------------a-------ttt----tt
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     I 6 C 0
s Ochotona_princeps.JH802095.1                            4998950  7 -  23139505 t----------------------------t-------tta----at
i Ochotona_princeps.JH802095.1                          I 5 C 0
s Odobenus_rosmarus.KB229369.1                             684752  7 -   3126709 a----------------------------t-------aaa----ta
i Odobenus_rosmarus.KB229369.1                          I 1 C 0
s Odocoileus_virginianus.KZ101650.1                       1083365  7 +   1425656 g----------------------------a-------ttt----ta
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         41448  7 +     78940 g----------------------------a-------ctt----ta
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  130117  7 +    145789 A----------------------------C-------TTT----TA
i Ondatra_zibethicus.OndZib_scaffold_6821               I 5 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  42807  7 +     62360 A----------------------------A-------TTT----TA
i Onychomys_torridus.OnyTor_scaffold_12578              I 5 C 0
s Orcinus_orca.KB316965.1                                 7228189  7 -   7562323 g----------------------------a-------ctt----ta
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              63976  7 -     66828 A----------------------------A-------TGT----TA
i Orycteropus_afer.OryAfe_flattened_line_13509          I 8 C 0
s Oryctolagus_cuniculus.CM000803.1                      141881501  7 + 163896628 t----------------------------t-------tct----ct
i Oryctolagus_cuniculus.CM000803.1                      I 5 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      314927  6 -    505867 -----------------------------t-------aaa----ta
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        4890  7 -     53940 A----------------------------A-------TTT----TT
i Otolemur_crassicaudatus.k141_505435                   I 6 C 0
s Otolemur_garnettii.GL873528.1                          18012863  7 -  38779656 a----------------------------a-------ttt----tt
i Otolemur_garnettii.GL873528.1                         I 6 C 0
s Ovis_aries.CM001582.2                                 134082377  7 - 275406953 g----------------------------a-------ctt----ta
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      83605  7 +    140051 G----------------------------A-------CTT----TA
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127578263  7 - 205426864 a----------------------------a-------ttt----at
i Pan_paniscus.CM003386.1                               I 6 C 0
s Pan_troglodytes.CM009241.2                            120155423  7 - 196562556 A----------------------------A-------TTT----AT
i Pan_troglodytes.CM009241.2                            I 6 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  39654  7 +    295523 A----------------------------C-------AAA----CA
i Panthera_onca.PanOnc_flattened_line_1615              I 1 C 0
s Panthera_pardus.KV860323.1                              3643469  7 +  18214204 a----------------------------c-------aaa----ca
i Panthera_pardus.KV860323.1                            I 1 C 0
s Panthera_tigris.KE721879.1                              5033117  7 -   6340057 a----------------------------c-------aaa----ca
i Panthera_tigris.KE721879.1                            I 1 C 0
s Pantholops_hodgsonii.KE114631.1                         1071246  7 -   1292953 g----------------------------a-------ctt----ta
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188160143  7 - 188283584 A----------------------------A-------TTT----AT
i Papio_anubis.CM001492.2                               I 6 C 0
s Papio_cynocephalus.k141_45376                              3233  7 +     25005 A----------------------------A-------TTT----AT
i Papio_cynocephalus.k141_45376                         I 6 C 0
s Papio_hamadryas.Contig15                               47517515  7 +  47705337 A----------------------------A-------TTT----AT
i Papio_hamadryas.Contig15                              I 6 C 0
s Papio_kindae.k141_5458022                                 71506  7 -    104429 A----------------------------A-------TTT----AT
i Papio_kindae.k141_5458022                             I 6 C 0
s Papio_papio.k141_979496                                   10038  7 +     14967 A----------------------------A-------TTT----AT
i Papio_papio.k141_979496                               I 6 C 0
s Papio_ursinus.k141_1345919                                 5903  7 -      7628 A----------------------------A-------TTT----AT
i Papio_ursinus.k141_1345919                            I 6 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    121145 14 -    135482 A----------------------------TAAATAGTAAA----CA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 I 1 C 0
s Perodicticus_ibeanus.k141_117958                          10560  7 -     23713 A----------------------------A-------GTT----TT
i Perodicticus_ibeanus.k141_117958                      I 6 C 0
s Perodicticus_potto.k141_1136815                           11700  7 +     61070 A----------------------------A-------GTT----TT
i Perodicticus_potto.k141_1136815                       I 6 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       1983  7 +     49596 A----------------------------A-------TTT----TA
i Perognathus_longimembris.PerPac_flattened_line_19359  I 286 C 0
s Peromyscus_maniculatus.KI615518.1                       4955174  7 -   8017169 a----------------------------a-------ttt----ta
i Peromyscus_maniculatus.KI615518.1                     I 5 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    17034  7 -     36578 A----------------------------C-------TTT----TG
i Petromus_typicus.PetTyp_scaffold_33007                I 5 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              2654  7 +      8220 G----------------------------A-------CTT----TA
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           9125  7 +     21690 G----------------------------A-------CTT----TA
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       25837  7 +     44506 A----------------------------A-------TTT----AT
i Plecturocebus_bernhardi.k141_959214                   I 6 C 0
s Plecturocebus_brunneus.k141_498086                        26050  7 +     67491 A----------------------------A-------TTT----AT
i Plecturocebus_brunneus.k141_498086                    I 6 C 0
s Plecturocebus_caligatus.k141_2539816                      16289  7 -     98129 A----------------------------A-------TTT----AT
i Plecturocebus_caligatus.k141_2539816                  I 6 C 0
s Plecturocebus_cinerascens.k141_744510                     25889  7 +    147771 A----------------------------A-------TTT----AT
i Plecturocebus_cinerascens.k141_744510                 I 6 C 0
s Plecturocebus_cupreus.k141_1145860                         2525  7 -     43940 A----------------------------A-------TTT----AT
i Plecturocebus_cupreus.k141_1145860                    I 6 C 0
s Plecturocebus_dubius.k141_3565563                          6608  7 -     55515 A----------------------------A-------TTT----AT
i Plecturocebus_dubius.k141_3565563                     I 6 C 0
s Plecturocebus_grovesi.k141_242819                         25962  7 +    152463 A----------------------------A-------TTT----AT
i Plecturocebus_grovesi.k141_242819                     I 6 C 0
s Plecturocebus_hoffmannsi.k141_985533                       3770  7 -    119457 A----------------------------A-------TTT----AT
i Plecturocebus_hoffmannsi.k141_985533                  I 6 C 0
s Plecturocebus_miltoni.k141_841561                         15685  7 +    134592 A----------------------------A-------TTT----AT
i Plecturocebus_miltoni.k141_841561                     I 6 C 0
s Plecturocebus_moloch.k141_890597                          26272  7 -     75465 A----------------------------A-------TTT----AT
i Plecturocebus_moloch.k141_890597                      I 6 C 0
s Pongo_abelii.NDHI03003816.1                              190886  7 -    373494 A----------------------------A-------TTT----AT
i Pongo_abelii.NDHI03003816.1                           I 6 C 0
s Pongo_pygmaeus.ctg62                                   19811533  7 +  19899266 A----------------------------A-------TTT----AT
i Pongo_pygmaeus.ctg62                                  I 6 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                3679  7 -      9567 C----------------------------A-------TTT----TA
i Procavia_capensis.ProCapCap_scaffold_149274           I 5 C 0
s Prolemur_simus.MPIZ01000048.1                           6852486  7 +  12164890 a----------------------------a-------ttt----tt
i Prolemur_simus.MPIZ01000048.1                         I 6 C 0
s Propithecus_coquerelli.NW_012147863.1                     21516  7 -     30946 a----------------------------a-------ttt----tt
i Propithecus_coquerelli.NW_012147863.1                 I 6 C 0
s Propithecus_coronatus.k141_1353159                         7572  7 +     11805 A----------------------------A-------TTT----TT
i Propithecus_coronatus.k141_1353159                    I 6 C 0
s Propithecus_diadema.k141_577245                           46920  7 +     52369 A----------------------------A-------TTT----TT
i Propithecus_diadema.k141_577245                       I 6 C 0
s Propithecus_edwardsi.k141_1317105                         39307  7 -     44753 A----------------------------A-------TTT----TT
i Propithecus_edwardsi.k141_1317105                     I 6 C 0
s Propithecus_perrieri.k141_7554                            21230  7 +     27322 A----------------------------A-------TTT----TT
i Propithecus_perrieri.k141_7554                        I 6 C 0
s Propithecus_tattersalli.k141_907138                       20864  7 -     53241 A----------------------------A-------TTT----TT
i Propithecus_tattersalli.k141_907138                   I 6 C 0
s Propithecus_verreauxi.k141_158021                         43128  7 -     48185 A----------------------------A-------TTT----TT
i Propithecus_verreauxi.k141_158021                     I 6 C 0
s Psammomys_obesus.NESX01026517.1                           37970  7 +     77221 a----------------------------a-------ttt----ta
i Psammomys_obesus.NESX01026517.1                       I 5 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        250014 35 -    344369 ATACATACATACATATATACATAAACAAAC-------AAA----CA
i Pteronura_brasiliensis.PteBra_flattened_line_1343     I 1 C 0
s Puma_concolor.QAVW01000427.1                          131539765  7 - 161321710 a----------------------------c-------aaa----ca
i Puma_concolor.QAVW01000427.1                          I 1 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                20229  7 +     68503 G----------------------------A-------TTT----TA
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13917385  7 +  90463843 a----------------------------t-------ttt----ta
i Rattus_norvegicus.chr11                               I 5 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1792339  7 +   2252614 a----------------------------a-------ttt----ta
i Rhinolophus_sinicus.LVEH01000179.1                    I 8 C 0
s Saiga_tatarica.SaiTat_scaffold_1069354                      225  7 -       709 g----------------------------a-------ctt----ta
i Saiga_tatarica.SaiTat_scaffold_1069354                C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15676295  7 -  43202129 a----------------------------a-------ttt----gt
i Saimiri_boliviensis.NW_024100938.1                    I 6 C 0
s Saimiri_cassiquiarensis.k141_808270                        8208  7 +     34089 A----------------------------A-------TTT----GT
i Saimiri_cassiquiarensis.k141_808270                   I 6 C 0
s Saimiri_macrodon.k141_2087127                              8148  7 -     60842 A----------------------------A-------TTT----GT
i Saimiri_macrodon.k141_2087127                         I 6 C 0
s Saimiri_oerstedii.k141_841116                              8242  7 +     67014 A----------------------------A-------TTT----GT
i Saimiri_oerstedii.k141_841116                         I 6 C 0
s Saimiri_sciureus.k141_1947592                              8219  7 +     60816 A----------------------------A-------TTT----GT
i Saimiri_sciureus.k141_1947592                         I 6 C 0
s Saimiri_ustus.k141_1282476                                 8156  7 -     76454 A----------------------------A-------TTT----GT
i Saimiri_ustus.k141_1282476                            I 6 C 0
s Sapajus_apella.ctg10                                   17344943  7 -  30362882 A----------------------------A-------TTT----AT
i Sapajus_apella.ctg10                                  I 6 C 0
s Sapajus_macrocephalus.k141_966464                         24264  7 -     62485 A----------------------------A-------TTT----AT
i Sapajus_macrocephalus.k141_966464                     I 6 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   39372  6 -    114521 -----------------------------A-------TTT----CA
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  104738  7 -    120886 A----------------------------A-------TTT----TA
i Sigmodon_hispidus.SigHis_scaffold_11332               I 5 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            23298  7 +    739146 G----------------------------A-------TTT----TA
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17769755 12 -  27805282 G-----------------------CCTAAA-------TCT----TA
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2243787  7 +   2842873 a----------------------------t-------ttt----ta
i Spermophilus_dauricus.KZ294190.1                      I 7 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             238536 32 -    276980 a---TAAATAAATAAATAATGATAAATAAT-------AAA----CA
i Spilogale_gracilis.SpiGra_flattened_line_905          I 1 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            32719 14 +     62062 A----------------------------TAAATAATAAA----CA
i Suricata_suricatta.SurSur_flattened_line_20339        I 1 C 0
s Symphalangus_syndactylus.tarseq_24                        18556  7 -  13920577 A----------------------------A-------TTT----GT
i Symphalangus_syndactylus.tarseq_24                    I 6 C 0
s Tapirus_indicus.TapInd_scaffold_176                      810523  7 +   1148477 A----------------------------A-------TTT----TA
i Tapirus_indicus.TapInd_scaffold_176                   I 1 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  61165  7 +     99546 A----------------------------A-------TTT----TA
i Tapirus_terrestris.TapTer_scaffold_14939              I 1 C 0
s Tarsius_lariang.k141_609102                               31110  7 +     42269 A----------------------------A-------TTT----GT
i Tarsius_lariang.k141_609102                           I 6 C 0
s Tarsius_wallacei.k141_48636                               64419  7 +     65473 A----------------------------A-------TTT----GT
i Tarsius_wallacei.k141_48636                           I 6 C 0
s Theropithecus_gelada.CM009951.1                       194011676  7 - 194193292 A----------------------------A-------TTT----AT
i Theropithecus_gelada.CM009951.1                       I 6 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   9261  7 +     90398 G----------------------------A-------CCT----TA
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16089570  7 +  31416278 a----------------------------a-------ttt----ta
i Trichechus_manatus.JH594618.1                         I 8 C 0
s Tupaia_chinensis.KB320831.1                             2797502  7 -   3938065 a----------------------------a-------ttt----ta
i Tupaia_chinensis.KB320831.1                           I 6 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    9431  7 +     13056 A----------------------------A-------TTT----TA
i Tupaia_tana.TupTan_flattened_line_68454               I 6 C 0
s Tursiops_truncatus.MRVK01000923.1                      69316918  7 -  96451834 g----------------------------a-------ctt----ta
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   9901  6 +     10241 -----------------------------A-------TTT----TA
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6520226  7 +  28682327 a----------------------------t-------aaa----ta
i Ursus_maritimus.KK498671.1                            I 1 C 0
s Varecia_rubra.k141_432109                                  9128  7 -     20643 A----------------------------A-------TTT----TT
i Varecia_rubra.k141_432109                             I 6 C 0
s Varecia_variegata.k141_775891                             28663  7 -     33872 A----------------------------A-------TTT----TT
i Varecia_variegata.k141_775891                         I 6 C 0
s Vicugna_pacos.KN269600.1                                1527951  7 -   2331223 g----------------------------a-------ctt----ta
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                144154  6 -    281493 -----------------------------T-------AAA----TA
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       131284  7 -    134049 A----------------------------T-------TTT----TA
i Xerus_inauris.XerIna_scaffold_7898                    I 7 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        219604 11 -    227762 ata-a-a----------------------t-------aaa----ta
i Zalophus_californianus.ZalCal_flattened_line_4097     I 1 C 0
s Zapus_hudsonius.ZapHud_scaffold_256618                      223  7 -      2259 A----------------------------A-------AAG----TA
i Zapus_hudsonius.ZapHud_scaffold_256618                I 5 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            1662  7 -     13665 t----------------------------a-------ctt----ta
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Eptesicus_fuscus.JH977687.1                             4708429 237 +   6522550 I
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Dinomys_branickii.DinBra_scaffold_1996                   158442 1030 +    228994 I
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           4051 456 -      6963 I
e Tonatia_saurophila.TonSau_scaffold_3334                  137563 275 -    259118 I
e Tamandua_tetradactyla.TamTet_scaffold_26877               16259 379 +     45698 I
e Tadarida_brasiliensis.TadBra_scaffold_61492                1822 242 +     20549 I
e Sus_scrofa.CM000824.4                                 189273670 1086 + 218635234 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Pteronotus_parnellii.KE867983.1                            5588 252 -     27784 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             6589 379 -      8794 I
e Myotis_myotis.MyoMyo_scaffold_6123                        13515 236 +     66751 I
e Myotis_lucifugus.GL429887.1                             3468272 238 -   3747815 I
e Myotis_davidii.KB114863.1                               5022194 233 +   6462685 I
e Myotis_brandtii.KE161952.1                               970769 237 +   8389877 I
e Murina_feae.MurFea_scaffold_2254                          23900 236 -    100666 I
e Mormoops_blainvillei.MorMeg_scaffold_2952                162937 259 +    265003 I
e Miniopterus_schreibersii.MinSch_scaffold_24116            36998 214 +     45743 I
e Miniopterus_natalensis.LDJU01000022.1                   8212509 213 +  10048721 I
e Micronycteris_hirsuta.MicHir_scaffold_37978               24387 274 -     32043 I
e Lipotes_vexillifer.KE558548.1                            139488  0 +   3060487 C
e Lasiurus_borealis.LasBor_scaffold_59542                    5042 241 +     26176 I
e Elephantulus_edwardii.JH947210.1                        7830035 1277 +  15467074 I
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Echinops_telfairi.JH980316.1                           22999931  2 -  44670279 I
e Desmodus_rotundus.KZ672188.1                           18700517 262 -  18957592 I
e Dasypus_novemcinctus.JH568778.1                          185121 383 -   6883506 I
e Choloepus_hoffmanni.KN194586.1                           763329 503 +    964067 I
e Choloepus_didactylus.ChoDid_scaffold_36182                18024 504 -     21363 I
e Carollia_perspicillata.CarPer_scaffold_4436               61226 261 +     67245 I
e Artibeus_jamaicensis.ArtJam_scaffold_41619                10440 261 -     29036 I
e Anoura_caudifer.AnoCau_scaffold_422                      392020 257 -    631301 I
e Trachypithecus_pileatus.k141_1022309                       5226  0 +     13828 C
e Trachypithecus_phayrei.ctg3                            44662914  0 -  44834318 C
e Trachypithecus_obscurus.k141_1115109                       8130  0 -     28054 C
e Trachypithecus_melamera.k141_699241                        2986  0 -     24393 C
e Trachypithecus_leucocephalus.k141_381681                   3005  0 +     12481 C
e Trachypithecus_laotum.k141_760702                          4719  0 +     14371 C
e Trachypithecus_hatinhensis.k141_504423                     6067  0 -     15592 C
e Trachypithecus_germaini.k141_868450                        3883  0 -     11566 C
e Trachypithecus_geei.k141_670367                           46082  0 -     54611 C
e Trachypithecus_francoisi.k141_768164                       4689  0 -     14244 C
e Trachypithecus_cristatus.k141_1011511                      5261  0 -     12939 C
e Trachypithecus_crepusculus.k141_1588528                   23360  0 -     32910 C
e Trachypithecus_auratus.k141_738098                        29800  0 +     38948 C
e Semnopithecus_vetulus.k141_1143185                        16479  0 +     30600 C
e Semnopithecus_schistaceus.k141_387461                     33457  0 +     42640 C
e Semnopithecus_priam.k141_410937                           40312  0 +     46263 C
e Semnopithecus_johnii.k141_785014                         121532  0 +    130994 C
e Semnopithecus_hypoleucos.k141_761524                      11528  0 +     20762 C
e Semnopithecus_entellus.k141_1572367                        6153  0 +     15331 C
e Rhinopithecus_strykeri.ctg4                            44859307  0 -  45163003 C
e Rhinopithecus_bieti.k119_554384                            2917  0 -     17045 C
e Pygathrix_nigripes_a.k141_101123                             8537  0 +     18040 C
e Pygathrix_nigripes_b.ctg79                                 6809148  0 +   6970761 C
e Pygathrix_cinerea.k141_374971                             32651  0 +     56732 C
e Presbytis_mitrata.k141_860013                              8661  0 +     14865 C
e Presbytis_comata.k141_672698                               8546  0 -     15069 C
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000036.1               26743271  0 +  26888534 C
e Piliocolobus_kirkii.k141_929665                            4788  0 +      7694 C
e Piliocolobus_gordonorum.k141_1270531                       5421  0 -     17985 C
e Piliocolobus_badius.k141_1987485                           4802  0 -      5908 C
e Octodon_degus.JH651621.1                                3687420 1881 +  10294119 I
e Nasalis_larvatus.k141_153429                              11264  0 +     48152 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     91920 1922 -    117718 I
e Hystrix_cristata.HysCri_scaffold_50788                     7688 1865 +     22540 I
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 32592 1717 -     67205 I
e Colobus_polykomos.k141_1406057                            19335  0 +     23629 C
e Colobus_guereza.LG08                                  147667351  0 + 156195979 C
e Colobus_angolensis.KN985967.1                          10889423  0 +  10971483 C
e Chinchilla_lanigera.JH721867.1                         15963245 964 +  43084221 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               17287 1 +    209709 a
s Acinonyx_jubatus.LLWD01000356.1                         2039247 1 +   3721120 a
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    117489 1 -    189883 A
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10662939 1 +  23371972 a
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7099727 1 -  16596857 a
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   21460 1 -     22067 A
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   5159 1 -     60446 A
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         5876 1 -     29318 A
i Allochrocebus_lhoesti.k141_3566948                    I 1 C 0
s Allochrocebus_preussi.k141_1108977                         4814 1 +     38766 A
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          5770 1 -     80423 A
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                               742 1 +     19852 A
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                2998 1 -     12443 A
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                              297 1 +      5070 A
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                   42 1 -      1641 A
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          2781 1 -     24210 A
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           29363 1 -     30219 A
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_405616                              5199 1 +     16794 A
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                             331 1 -      1470 A
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             4476 1 -      9835 A
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3525244 1 +   4113121 a
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             2675 1 +     55446 A
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 66089 1 +     78111 A
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            9035 1 +     22701 A
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5752993 1 +   9889416 a
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             9591 1 -    104377 A
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               9598 1 +     23246 A
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     2110 1 +     11424 A
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        6196 1 +      9265 A
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9542884 1 +  39197703 A
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             64157 1 +     85812 A
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                15170 1 +     89302 A
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             19671 1 -     58268 A
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             67665 1 +    119057 A
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               9634 1 -     25888 A
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                10674 1 -     16375 A
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               4290 1 +      6337 A
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26383711 1 +  51448160 a
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        8884 1 -     13118 a
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   47706 1 -     72089 A
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   301850 1 -   6870073 a
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22955948 1 + 161108492 A
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     418213 1 +    998990 A
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22664602 1 + 158972876 A
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               674365 1 +   1914593 A
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               117537 1 -    171031 A
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 16557 1 +    125063 A
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                18604 1 -    216513 A
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       11147 1 -    134917 A
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3222848 1 -   8989139 a
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           400550 1 -  15254737 a
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2976286 1 +   6889770 a
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11526080 1 +  39901454 A
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   21054 1 +     87036 A
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11272763 1 -  35597290 A
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11095474 1 +  39895921 A
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16462259 1 -  44759192 A
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21330324 1 + 157394656 a
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135711541 1 - 157403528 a
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          313260 1 +    345090 a
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   162404 1 -    276539 A
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15789396 1 -  24422027 N
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15801335 1 -  24440124 a
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       179507 1 +    436027 A
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18894369 1 -  29618158 A
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                11913 1 -     26817 A
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                16157 1 +     25043 A
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                        12264 1 +     21754 A
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4367293 1 +   7569818 a
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         7050 1 -      9338 A
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6559100 1 +   6739814 A
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      30577 1 +     60454 A
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          5781 1 -     21101 A
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         63091 1 -    107033 A
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        5954 1 -     17608 A
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          3119 1 +     45019 A
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           3179 1 +     15177 A
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          6001 1 +     16677 A
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           28191 1 +     35983 A
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11994722 1 +  12117833 A
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46481483 1 +  46592721 A
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      45032 1 -     45581 A
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       6015 1 +     35577 A
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        5809 1 -     25661 A
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        5765 1 -     17744 A
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        25350 1 +     37128 A
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           62900 1 -     68416 A
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                           12001 1 +     13308 A
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             9195 1 -     18223 A
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                               934 1 +    188999 A
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           45233 1 +     57117 A
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          49912 1 +     54541 A
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chiropotes_israelita.k141_1189915                         74716 1 +    196370 A
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          18897 1 +     40510 A
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15143535 1 -  15256731 A
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      37999 1 -     53260 A
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101148558 1 + 101219884 a
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_629495              1947 1 -      3120 T
i Chrysochloris_asiatica.ChrAsi_scaffold_629495         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         1940 1 -      5782 a
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 282353 1 -    399297 T
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53034723 1 +  72327488 a
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              1344 1 -     22648 A
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            57241 1 -     70449 A
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  213719 1 -    956709 A
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                20568 1 +     26546 A
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             61706 1 -    236241 A
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16848829 1 +  31942871 A
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80040336 1 -  96802777 a
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 325940 1 +    993696 a
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   6581 1 +    151128 A
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dipodomys_ordii.KN672545.1                              3659898 1 +   4240102 A
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  2246 1 -     11986 A
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                39675 1 -     73477 A
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1495922 1 +   1727528 a
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        243524 1 -    369425 a
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01198462.1                           1266 1 -      1901 a
i Ellobius_talpinus.LOJH01198462.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85877198 1 +  99434291 a
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Equus_asinus.JREZ01000062.1                             5856306 1 -   7175178 t
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13354806 1 +  41866177 t
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          16296 1 +     92910 t
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11540759 1 +  16010500 G
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48780568 1 -  48907691 A
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          318554 1 +    330699 A
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             65011 1 +     89355 A
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              8983 1 +     13586 A
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_1015201                              2246 1 -      4292 A
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            15379 1 +     36558 A
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            11704 1 +     60246 A
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                15187 1 +    109717 A
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 3172 1 -     19505 A
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                19844 1 +     27497 A
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           22300 1 +     26808 A
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                37035 1 +     46535 A
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              19774 1 -     29447 A
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129898674 1 - 159252932 a
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129285642 1 - 158578461 a
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 26741 1 +     52776 A
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13895851 1 -  19261668 a
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     215037 1 -    847004 A
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           17398 1 -     43889 A
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          14541 1 +     27357 A
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               159280 1 +    324696 A
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    185720 1 -    189561 a
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           16116 1 -     18683 C
i Glis_glis.GliGli_scaffold_79770                       C 0 I 28
s Gorilla_beringei.k141_111300                               8991 1 -     14630 A
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119656091 1 - 195582420 A
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   79504 1 +    118900 A
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 I 16
s Hapalemur_alaotrensis.k141_1280836                         5767 1 +     10286 A
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             4245 1 -     11661 A
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             9572 1 +     56096 A
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        32821 1 -     42470 A
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        49447 1 -     54384 A
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              22382 1 +     53719 A
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                32594 1 -     91191 A
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2560370 1 +  31725842 a
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               62580 1 +     73687 A
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              150334 1 +    277961 A
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      282746 1 -    477199 a
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959                515 1 +     26078 A
i Hipposideros_galeritus.HipGal_scaffold_52959          C 0 C 0
s Hoolock_leuconedys.ctg315                                   349989 1 +    431944 A
i Hoolock_leuconedys.ctg315                                C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 22978 1 -     67322 A
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           20963 1 -    119109 A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_1816750                             1470 1 +      3202 A
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1633646                              1440 1 -      2102 A
i Hylobates_agilis.k141_1633646                         C 0 C 0
s Hylobates_klossii.k141_468230                              2957 1 +      5464 A
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14628305 1 -  25970782 A
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                             856 1 +      4161 A
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             36413 1 -     60944 a
i Hylobates_pileatus_a.tarseq_592                         I 591 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7130089 1 +  13083262 a
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   1246 1 +      3484 A
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              12548 1 +     17520 A
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8577144 1 +  11848649 A
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Lagothrix_lagothricha.k141_12968                          53753 1 -    147782 A
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lemur_catta.scaffold_1                                258411119 1 - 285822530 A
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        28422 1 +     39228 A
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            57786 1 +     63517 A
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        36166 1 -     38897 A
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      2212 1 -     13103 A
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3091162 1 -   3498232 a
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    18490 1 +     22452 a
i Lepus_americanus.LepAme_scaffold_62849                C 0 I 177
s Lophocebus_aterrimus.ctg55                             19252188 1 +  19376315 A
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           14979 1 +     84689 A
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3782718 1 +   6799190 A
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20598500 1 -  62548349 a
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11094930 1 +  39895028 A
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             23939 1 +     74745 A
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12710400 1 +  12821369 A
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                2974 1 -     26467 A
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           50845 1 +     63263 A
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 2955 1 -     26361 A
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 6145 1 -      7381 A
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  49374 1 -     79256 A
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196039472 1 + 196197964 A
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11449642 1 +  11645122 a
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   8328 1 -     46448 A
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                5990 1 -     13212 A
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 19671 1 -     55006 A
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43844786 1 +  43892939 A
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               20954 1 -     24607 A
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               8325 1 -     27140 A
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43441361 1 -  43563597 A
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4454165 1 -   4543643 A
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            149365 1 +    252755 a
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             39513 1 +     58827 a
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36877958 1 +  64221397 a
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       65152 1 -    234502 A
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             6081 1 -     87323 A
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                  980 1 +    115071 A
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1051248 1 -  26018355 a
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    2137 1 -     12939 A
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16514182 1 +  47401472 a
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  41214 1 -     48017 A
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22823934 1 -  98408828 A
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         5907 1 +     29742 A
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        16658 1 -    104932 A
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     4864 1 -     12809 A
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 149929 1 +    154973 A
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  5940 1 -     19904 A
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  150063 1 -    168139 A
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Mus_caroli.LT608236.1                                  70771553 1 +  92629107 a
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75493606 1 +  98207768 a
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67559983 1 +  89017189 a
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74336333 1 +  97876770 a
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             14619 1 +     98495 c
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4427926 1 -  28371801 a
i Mustela_putorius.JH417978.1                           C 0 C 0
s Nannospalax_galili.KL201303.1                            120084 1 +    362372 a
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4490057 1 -  14209539 a
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3954520 1 -   4490290 a
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Nomascus_annamensis.k141_1817463                            596 1 -      1070 A
i Nomascus_annamensis.k141_1817463                      C 0 C 0
s Nomascus_concolor.k141_70405                                596 1 +      1153 A
i Nomascus_concolor.k141_70405                          C 0 C 0
s Nomascus_gabriellae.k141_1400361                            527 1 -      2203 A
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_1022                             550 1 -     11638 A
i Nomascus_siki_b.tarseq_1022                       C 0 C 0
s Nomascus_siki_a.k141_421408                                   440 1 +     16235 A
i Nomascus_siki_a.k141_421408                             I 13 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                37794 1 +   3668941 a
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65571548 1 -  95554990 A
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_771591                            14957 1 +     16181 A
i Nycticebus_coucang.k141_771591                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65679759 1 +  89412551 a
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4998957 1 -  23139505 g
i Ochotona_princeps.JH802095.1                          C 0 I 9
s Odobenus_rosmarus.KB229369.1                             684759 1 -   3126709 a
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1083372 1 +   1425656 a
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         41455 1 +     78940 a
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  130124 1 +    145789 A
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  42814 1 +     62360 A
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7228196 1 -   7562323 a
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              63983 1 -     66828 A
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141881508 1 + 163896628 a
i Oryctolagus_cuniculus.CM000803.1                      C 0 I 177
s Otocyon_megalotis.JAEUCK010005121.1                      314933 1 -    505867 a
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        4897 1 -     53940 A
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18012870 1 -  38779656 a
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134082384 1 - 275406953 a
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      83612 1 +    140051 A
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127578270 1 - 205426864 a
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120155430 1 - 196562556 A
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  39661 1 +    295523 A
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3643476 1 +  18214204 a
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5033124 1 -   6340057 a
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1071253 1 -   1292953 a
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188160150 1 - 188283584 A
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              3240 1 +     25005 A
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47517522 1 +  47705337 A
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 71513 1 -    104429 A
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   10045 1 +     14967 A
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 5910 1 -      7628 A
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    121159 1 -    135482 A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          10567 1 -     23713 A
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           11707 1 +     61070 A
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       1990 1 +     49596 A
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4955181 1 -   8017169 a
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    17041 1 -     36578 A
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              2661 1 +      8220 A
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           9132 1 +     21690 A
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       25844 1 +     44506 A
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        26057 1 +     67491 A
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      16296 1 -     98129 A
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     25896 1 +    147771 A
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         2532 1 -     43940 A
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          6615 1 -     55515 A
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         25969 1 +    152463 A
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       3777 1 -    119457 A
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         15692 1 +    134592 A
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          26279 1 -     75465 A
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              190893 1 -    373494 A
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19811540 1 +  19899266 A
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                3686 1 -      9567 A
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6852493 1 +  12164890 a
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     21523 1 -     30946 a
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         7579 1 +     11805 A
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           46927 1 +     52369 A
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         39314 1 -     44753 A
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            21237 1 +     27322 A
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       20871 1 -     53241 A
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         43135 1 -     48185 A
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           37977 1 +     77221 a
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        250049 1 -    344369 A
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Puma_concolor.QAVW01000427.1                          131539772 1 - 161321710 a
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                20236 1 +     68503 A
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13917392 1 +  90463843 a
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1792346 1 +   2252614 a
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_1069354                      232 1 -       709 a
i Saiga_tatarica.SaiTat_scaffold_1069354                C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15676302 1 -  43202129 a
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        8215 1 +     34089 A
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              8155 1 -     60842 A
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              8249 1 +     67014 A
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              8226 1 +     60816 A
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 8163 1 -     76454 A
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17344950 1 -  30362882 A
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         24271 1 -     62485 A
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   39378 1 -    114521 A
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  104745 1 -    120886 A
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            23305 1 +    739146 A
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17769767 1 -  27805282 A
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2243794 1 +   2842873 a
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             238568 1 -    276980 A
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            32733 1 +     62062 A
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        18563 1 -  13920577 A
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      810530 1 +   1148477 A
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  61172 1 +     99546 A
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               31117 1 +     42269 A
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               64426 1 +     65473 A
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194011683 1 - 194193292 A
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   9268 1 +     90398 A
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16089577 1 +  31416278 a
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2797509 1 -   3938065 a
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    9438 1 +     13056 A
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69316925 1 -  96451834 a
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   9907 1 +     10241 A
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6520233 1 +  28682327 a
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  9135 1 -     20643 A
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             28670 1 -     33872 A
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1527958 1 -   2331223 a
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                144160 1 -    281493 A
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       131291 1 -    134049 A
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        219615 1 -    227762 a
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_256618                      230 1 -      2259 A
i Zapus_hudsonius.ZapHud_scaffold_256618                C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            1669 1 -     13665 a
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Eptesicus_fuscus.JH977687.1                             4708429 237 +   6522550 I
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Dinomys_branickii.DinBra_scaffold_1996                   158442 1030 +    228994 I
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           4051 456 -      6963 I
e Tonatia_saurophila.TonSau_scaffold_3334                  137563 275 -    259118 I
e Tamandua_tetradactyla.TamTet_scaffold_26877               16259 379 +     45698 I
e Tadarida_brasiliensis.TadBra_scaffold_61492                1822 242 +     20549 I
e Sus_scrofa.CM000824.4                                 189273670 1086 + 218635234 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Pteronotus_parnellii.KE867983.1                            5588 252 -     27784 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             6589 379 -      8794 I
e Myotis_myotis.MyoMyo_scaffold_6123                        13515 236 +     66751 I
e Myotis_lucifugus.GL429887.1                             3468272 238 -   3747815 I
e Myotis_davidii.KB114863.1                               5022194 233 +   6462685 I
e Myotis_brandtii.KE161952.1                               970769 237 +   8389877 I
e Murina_feae.MurFea_scaffold_2254                          23900 236 -    100666 I
e Mormoops_blainvillei.MorMeg_scaffold_2952                162937 259 +    265003 I
e Miniopterus_schreibersii.MinSch_scaffold_24116            36998 214 +     45743 I
e Miniopterus_natalensis.LDJU01000022.1                   8212509 213 +  10048721 I
e Micronycteris_hirsuta.MicHir_scaffold_37978               24387 274 -     32043 I
e Lipotes_vexillifer.KE558548.1                            139488 0 +   3060487 C
e Lasiurus_borealis.LasBor_scaffold_59542                    5042 241 +     26176 I
e Kogia_breviceps.KogBre_flattened_line_35920               27132 184 +     37189 I
e Elephantulus_edwardii.JH947210.1                        7830035 1277 +  15467074 I
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Echinops_telfairi.JH980316.1                           22999931 2 -  44670279 I
e Desmodus_rotundus.KZ672188.1                           18700517 262 -  18957592 I
e Dasypus_novemcinctus.JH568778.1                          185121 383 -   6883506 I
e Condylura_cristata.JH655880.1                          60621918 0 +  78930452 C
e Choloepus_hoffmanni.KN194586.1                           763329 503 +    964067 I
e Choloepus_didactylus.ChoDid_scaffold_36182                18024 504 -     21363 I
e Carollia_perspicillata.CarPer_scaffold_4436               61226 261 +     67245 I
e Artibeus_jamaicensis.ArtJam_scaffold_41619                10440 261 -     29036 I
e Anoura_caudifer.AnoCau_scaffold_422                      392020 257 -    631301 I
e Trachypithecus_pileatus.k141_1022309                       5226 0 +     13828 C
e Trachypithecus_phayrei.ctg3                            44662914 0 -  44834318 C
e Trachypithecus_obscurus.k141_1115109                       8130 0 -     28054 C
e Trachypithecus_melamera.k141_699241                        2986 0 -     24393 C
e Trachypithecus_leucocephalus.k141_381681                   3005 0 +     12481 C
e Trachypithecus_laotum.k141_760702                          4719 0 +     14371 C
e Trachypithecus_hatinhensis.k141_504423                     6067 0 -     15592 C
e Trachypithecus_germaini.k141_868450                        3883 0 -     11566 C
e Trachypithecus_geei.k141_670367                           46082 0 -     54611 C
e Trachypithecus_francoisi.k141_768164                       4689 0 -     14244 C
e Trachypithecus_cristatus.k141_1011511                      5261 0 -     12939 C
e Trachypithecus_crepusculus.k141_1588528                   23360 0 -     32910 C
e Trachypithecus_auratus.k141_738098                        29800 0 +     38948 C
e Semnopithecus_vetulus.k141_1143185                        16479 0 +     30600 C
e Semnopithecus_schistaceus.k141_387461                     33457 0 +     42640 C
e Semnopithecus_priam.k141_410937                           40312 0 +     46263 C
e Semnopithecus_johnii.k141_785014                         121532 0 +    130994 C
e Semnopithecus_hypoleucos.k141_761524                      11528 0 +     20762 C
e Semnopithecus_entellus.k141_1572367                        6153 0 +     15331 C
e Rhinopithecus_strykeri.ctg4                            44859307 0 -  45163003 C
e Rhinopithecus_bieti.k119_554384                            2917 0 -     17045 C
e Pygathrix_nigripes_a.k141_101123                             8537 0 +     18040 C
e Pygathrix_nigripes_b.ctg79                                 6809148 0 +   6970761 C
e Pygathrix_cinerea.k141_374971                             32651 0 +     56732 C
e Presbytis_mitrata.k141_860013                              8661 0 +     14865 C
e Presbytis_comata.k141_672698                               8546 0 -     15069 C
e Pithecia_vanzolinii.k141_831006                           15424 0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514 0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521 0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292 0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093 0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038 0 +     78826 C
e Pithecia_albicans.k141_991845                             45662 0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000036.1               26743271 0 +  26888534 C
e Piliocolobus_kirkii.k141_929665                            4788 0 +      7694 C
e Piliocolobus_gordonorum.k141_1270531                       5421 0 -     17985 C
e Piliocolobus_badius.k141_1987485                           4802 0 -      5908 C
e Octodon_degus.JH651621.1                                3687420 1881 +  10294119 I
e Nasalis_larvatus.k141_153429                              11264 0 +     48152 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     91920 1922 -    117718 I
e Hystrix_cristata.HysCri_scaffold_50788                     7688 1865 +     22540 I
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 32592 1717 -     67205 I
e Colobus_polykomos.k141_1406057                            19335 0 +     23629 C
e Colobus_guereza.LG08                                  147667351 0 + 156195979 C
e Colobus_angolensis.KN985967.1                          10889423 0 +  10971483 C
e Chinchilla_lanigera.JH721867.1                         15963245 964 +  43084221 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               17288 1 +    209709 a
s Acinonyx_jubatus.LLWD01000356.1                         2039248 1 +   3721120 a
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    117490 1 -    189883 C
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10662940 1 +  23371972 a
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7099728 1 -  16596857 a
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   21461 1 -     22067 A
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   5160 1 -     60446 A
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         5877 1 -     29318 A
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         4815 1 +     38766 A
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          5771 1 -     80423 A
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                               743 1 +     19852 A
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                2999 1 -     12443 A
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                              298 1 +      5070 A
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                   43 1 -      1641 A
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          2782 1 -     24210 A
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           29364 1 -     30219 A
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_405616                              5200 1 +     16794 A
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                             332 1 -      1470 A
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             4477 1 -      9835 A
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3525245 1 +   4113121 a
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             2676 1 +     55446 A
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 66090 1 +     78111 A
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            9036 1 +     22701 A
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5752994 1 +   9889416 a
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             9592 1 -    104377 A
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               9599 1 +     23246 A
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     2111 1 +     11424 A
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        6197 1 +      9265 A
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9542885 1 +  39197703 A
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             64158 1 +     85812 A
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                15171 1 +     89302 A
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             19672 1 -     58268 A
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             67666 1 +    119057 A
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               9635 1 -     25888 A
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                10675 1 -     16375 A
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               4291 1 +      6337 A
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26383712 1 +  51448160 a
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        8885 1 -     13118 a
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   47707 1 -     72089 A
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   301851 1 -   6870073 a
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22955949 1 + 161108492 A
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     418214 1 +    998990 A
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22664603 1 + 158972876 A
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               674366 1 +   1914593 A
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               117538 1 -    171031 A
i Cacajao_ayresi.k141_724503                            C 0 I 2
s Cacajao_calvus.k141_96166                                 16558 1 +    125063 A
i Cacajao_calvus.k141_96166                             C 0 I 2
s Cacajao_hosomi.k141_303789                                18605 1 -    216513 A
i Cacajao_hosomi.k141_303789                            C 0 I 2
s Cacajao_melanocephalus.k141_1160263                       11148 1 -    134917 A
i Cacajao_melanocephalus.k141_1160263                   C 0 I 2
s Camelus_bactrianus.KN276303.1                           3222849 1 -   8989139 a
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           400551 1 -  15254737 a
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2976287 1 +   6889770 a
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11526081 1 +  39901454 A
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   21055 1 +     87036 A
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11272764 1 -  35597290 A
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11095475 1 +  39895921 A
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16462260 1 -  44759192 A
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21330325 1 + 157394656 a
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135711542 1 - 157403528 a
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          313261 1 +    345090 A
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15789397 1 -  24422027 N
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15801336 1 -  24440124 a
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       179508 1 +    436027 A
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18894370 1 -  29618158 A
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                11914 1 -     26817 A
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                16158 1 +     25043 A
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                        12265 1 +     21754 A
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4367294 1 +   7569818 a
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         7051 1 -      9338 A
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6559101 1 +   6739814 A
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      30578 1 +     60454 A
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          5782 1 -     21101 A
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         63092 1 -    107033 A
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        5955 1 -     17608 A
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          3120 1 +     45019 A
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           3180 1 +     15177 A
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          6002 1 +     16677 A
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           28192 1 +     35983 A
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11994723 1 +  12117833 A
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46481484 1 +  46592721 A
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      45033 1 -     45581 A
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       6016 1 +     35577 A
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        5810 1 -     25661 A
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        5766 1 -     17744 A
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        25351 1 +     37128 A
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           62901 1 -     68416 A
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                           12002 1 +     13308 A
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             9196 1 -     18223 A
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                               935 1 +    188999 A
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           45234 1 +     57117 A
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          49913 1 +     54541 A
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chiropotes_israelita.k141_1189915                         74717 1 +    196370 A
i Chiropotes_israelita.k141_1189915                     C 0 I 2
s Chiropotes_sagulatus.k141_773804                          18898 1 +     40510 A
i Chiropotes_sagulatus.k141_773804                      C 0 I 2
s Chlorocebus_aethiops.ctg22                             15143536 1 -  15256731 A
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      38000 1 -     53260 A
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101148559 1 + 101219884 a
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_629495              1948 1 -      3120 A
i Chrysochloris_asiatica.ChrAsi_scaffold_629495         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         1941 1 -      5782 c
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 282354 1 -    399297 A
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53034724 1 +  72327488 a
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              1345 1 -     22648 A
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            57242 1 -     70449 A
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  213720 1 -    956709 G
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                20569 1 +     26546 A
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             61707 1 -    236241 A
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16848830 1 +  31942871 A
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80040337 1 -  96802777 a
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 325941 1 +    993696 a
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   6582 1 +    151128 A
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dipodomys_ordii.KN672545.1                              3659899 1 +   4240102 A
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  2247 1 -     11986 T
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                39676 1 -     73477 A
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1495923 1 +   1727528 a
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        243525 1 -    369425 a
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01198462.1                           1267 1 -      1901 a
i Ellobius_talpinus.LOJH01198462.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85877199 1 +  99434291 a
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Equus_asinus.JREZ01000062.1                             5856307 1 -   7175178 a
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13354807 1 +  41866177 a
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          16297 1 +     92910 a
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11540760 1 +  16010500 A
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48780569 1 -  48907691 A
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          318555 1 +    330699 A
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             65012 1 +     89355 A
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              8984 1 +     13586 A
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_1015201                              2247 1 -      4292 A
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            15380 1 +     36558 A
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            11705 1 +     60246 A
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                15188 1 +    109717 A
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 3173 1 -     19505 A
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                19845 1 +     27497 A
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           22301 1 +     26808 A
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                37036 1 +     46535 A
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              19775 1 -     29447 A
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129898675 1 - 159252932 a
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129285643 1 - 158578461 a
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 26742 1 +     52776 A
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13895852 1 -  19261668 a
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     215038 1 -    847004 A
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           17399 1 -     43889 A
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          14542 1 +     27357 A
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               159281 1 +    324696 A
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    185721 1 -    189561 a
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           16145 1 -     18683 A
i Glis_glis.GliGli_scaffold_79770                       I 28 I 31
s Gorilla_beringei.k141_111300                               8992 1 -     14630 A
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119656092 1 - 195582420 A
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   79521 1 +    118900 A
i Graphiurus_murinus.GraMur_scaffold_4493               I 16 C 0
s Hapalemur_alaotrensis.k141_1280836                         5768 1 +     10286 A
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             4246 1 -     11661 A
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             9573 1 +     56096 A
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        32822 1 -     42470 A
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        49448 1 -     54384 A
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              22383 1 +     53719 A
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                32595 1 -     91191 A
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2560371 1 +  31725842 g
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               62581 1 +     73687 A
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              150335 1 +    277961 A
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      282747 1 -    477199 a
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959                516 1 +     26078 A
i Hipposideros_galeritus.HipGal_scaffold_52959          C 0 C 0
s Hoolock_leuconedys.ctg315                                   349990 1 +    431944 A
i Hoolock_leuconedys.ctg315                                C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 22979 1 -     67322 A
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           20964 1 -    119109 A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_1816750                             1471 1 +      3202 A
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1633646                              1441 1 -      2102 A
i Hylobates_agilis.k141_1633646                         C 0 C 0
s Hylobates_klossii.k141_468230                              2958 1 +      5464 A
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14628306 1 -  25970782 A
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                             857 1 +      4161 A
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             36414 1 -     60944 a
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7130090 1 +  13083262 a
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   1247 1 +      3484 A
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              12549 1 +     17520 A
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8577145 1 +  11848649 A
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Lagothrix_lagothricha.k141_12968                          53754 1 -    147782 A
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lemur_catta.scaffold_1                                258411120 1 - 285822530 A
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        28423 1 +     39228 A
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            57787 1 +     63517 A
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        36167 1 -     38897 A
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      2213 1 -     13103 A
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3091163 1 -   3498232 a
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    18668 1 +     22452 g
i Lepus_americanus.LepAme_scaffold_62849                I 177 C 0
s Lophocebus_aterrimus.ctg55                             19252189 1 +  19376315 A
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           14980 1 +     84689 A
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3782719 1 +   6799190 A
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20598501 1 -  62548349 a
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11094931 1 +  39895028 A
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             23940 1 +     74745 A
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12710401 1 +  12821369 A
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                2975 1 -     26467 A
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           50846 1 +     63263 A
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 2956 1 -     26361 A
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 6146 1 -      7381 A
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  49375 1 -     79256 A
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196039473 1 + 196197964 A
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11449643 1 +  11645122 a
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   8329 1 -     46448 A
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                5991 1 -     13212 A
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 19672 1 -     55006 A
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43844787 1 +  43892939 A
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               20955 1 -     24607 A
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               8326 1 -     27140 A
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43441362 1 -  43563597 A
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4454166 1 -   4543643 A
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            149366 1 +    252755 a
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             39514 1 +     58827 a
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36877959 1 +  64221397 a
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       65153 1 -    234502 A
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             6082 1 -     87323 A
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                  981 1 +    115071 A
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1051249 1 -  26018355 a
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    2138 1 -     12939 A
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16514183 1 +  47401472 a
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22823935 1 -  98408828 T
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         5908 1 +     29742 A
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        16659 1 -    104932 A
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     4865 1 -     12809 A
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 149930 1 +    154973 A
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  5941 1 -     19904 A
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  150064 1 -    168139 A
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Mus_caroli.LT608236.1                                  70771554 1 +  92629107 a
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75493607 1 +  98207768 a
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67559984 1 +  89017189 a
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74336334 1 +  97876770 a
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             14620 1 +     98495 a
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4427927 1 -  28371801 a
i Mustela_putorius.JH417978.1                           C 0 C 0
s Nannospalax_galili.KL201303.1                            120085 1 +    362372 a
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4490058 1 -  14209539 a
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3954521 1 -   4490290 a
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Nomascus_annamensis.k141_1817463                            597 1 -      1070 A
i Nomascus_annamensis.k141_1817463                      C 0 C 0
s Nomascus_concolor.k141_70405                                597 1 +      1153 A
i Nomascus_concolor.k141_70405                          C 0 C 0
s Nomascus_gabriellae.k141_1400361                            528 1 -      2203 A
i Nomascus_gabriellae.k141_1400361                      C 0 I 2
s Nomascus_siki_b.tarseq_1022                             551 1 -     11638 A
i Nomascus_siki_b.tarseq_1022                       C 0 C 0
s Nomascus_siki_a.k141_421408                                   441 1 +     16235 A
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                37795 1 +   3668941 a
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65571549 1 -  95554990 A
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_771591                            14958 1 +     16181 A
i Nycticebus_coucang.k141_771591                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65679760 1 +  89412551 a
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4998967 1 -  23139505 g
i Ochotona_princeps.JH802095.1                          I 9 C 0
s Odobenus_rosmarus.KB229369.1                             684760 1 -   3126709 a
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1083373 1 +   1425656 a
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         41456 1 +     78940 a
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  130125 1 +    145789 A
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  42815 1 +     62360 A
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7228197 1 -   7562323 a
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              63984 1 -     66828 A
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141881686 1 + 163896628 g
i Oryctolagus_cuniculus.CM000803.1                      I 177 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      314934 1 -    505867 a
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        4898 1 -     53940 A
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18012871 1 -  38779656 a
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134082385 1 - 275406953 a
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      83613 1 +    140051 A
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127578271 1 - 205426864 a
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120155431 1 - 196562556 A
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  39662 1 +    295523 A
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3643477 1 +  18214204 a
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5033125 1 -   6340057 a
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1071254 1 -   1292953 a
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188160151 1 - 188283584 A
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              3241 1 +     25005 A
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47517523 1 +  47705337 A
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 71514 1 -    104429 A
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   10046 1 +     14967 A
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 5911 1 -      7628 A
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    121160 1 -    135482 A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          10568 1 -     23713 A
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           11708 1 +     61070 A
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       1991 1 +     49596 A
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4955182 1 -   8017169 a
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    17042 1 -     36578 A
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              2662 1 +      8220 A
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           9133 1 +     21690 G
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       25845 1 +     44506 A
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        26058 1 +     67491 A
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      16297 1 -     98129 A
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     25897 1 +    147771 A
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         2533 1 -     43940 A
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          6616 1 -     55515 A
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         25970 1 +    152463 A
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       3778 1 -    119457 A
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         15693 1 +    134592 A
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          26280 1 -     75465 A
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              190894 1 -    373494 A
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19811541 1 +  19899266 A
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                3687 1 -      9567 A
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6852494 1 +  12164890 a
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     21524 1 -     30946 a
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         7580 1 +     11805 A
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           46928 1 +     52369 A
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         39315 1 -     44753 A
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            21238 1 +     27322 A
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       20872 1 -     53241 A
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         43136 1 -     48185 A
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           37978 1 +     77221 a
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        250050 1 -    344369 A
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Puma_concolor.QAVW01000427.1                          131539773 1 - 161321710 a
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                20237 1 +     68503 A
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13917393 1 +  90463843 c
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1792347 1 +   2252614 a
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_1069354                      233 1 -       709 a
i Saiga_tatarica.SaiTat_scaffold_1069354                C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15676303 1 -  43202129 a
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        8216 1 +     34089 A
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              8156 1 -     60842 A
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              8250 1 +     67014 A
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              8227 1 +     60816 A
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 8164 1 -     76454 A
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17344951 1 -  30362882 A
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         24272 1 -     62485 A
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   39379 1 -    114521 A
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  104746 1 -    120886 A
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            23306 1 +    739146 A
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17769768 1 -  27805282 A
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2243795 1 +   2842873 a
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             238569 1 -    276980 A
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            32734 1 +     62062 A
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189274756 1 + 218635234 G
i Sus_scrofa.CM000824.4                                 I 1086 C 0
s Symphalangus_syndactylus.tarseq_24                        18564 1 -  13920577 A
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      810531 1 +   1148477 A
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  61173 1 +     99546 G
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               31118 1 +     42269 A
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               64427 1 +     65473 A
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194011684 1 - 194193292 A
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   9269 1 +     90398 A
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16089578 1 +  31416278 a
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2797510 1 -   3938065 a
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    9439 1 +     13056 A
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69316926 1 -  96451834 a
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   9908 1 +     10241 A
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6520234 1 +  28682327 a
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  9136 1 -     20643 A
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             28671 1 -     33872 A
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1527959 1 -   2331223 a
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                144161 1 -    281493 A
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       131292 1 -    134049 A
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        219616 1 -    227762 a
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_256618                      231 1 -      2259 A
i Zapus_hudsonius.ZapHud_scaffold_256618                C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            1670 1 -     13665 a
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Eptesicus_fuscus.JH977687.1                             4708429 237 +   6522550 I
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Dinomys_branickii.DinBra_scaffold_1996                   158442 1030 +    228994 I
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           4051 456 -      6963 I
e Tonatia_saurophila.TonSau_scaffold_3334                  137563 275 -    259118 I
e Tamandua_tetradactyla.TamTet_scaffold_26877               16259 379 +     45698 I
e Tadarida_brasiliensis.TadBra_scaffold_61492                1822 242 +     20549 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Pteronotus_parnellii.KE867983.1                            5588 252 -     27784 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             6589 379 -      8794 I
e Myotis_myotis.MyoMyo_scaffold_6123                        13515 236 +     66751 I
e Myotis_lucifugus.GL429887.1                             3468272 238 -   3747815 I
e Myotis_davidii.KB114863.1                               5022194 233 +   6462685 I
e Myotis_brandtii.KE161952.1                               970769 237 +   8389877 I
e Murina_feae.MurFea_scaffold_2254                          23900 236 -    100666 I
e Mormoops_blainvillei.MorMeg_scaffold_2952                162937 259 +    265003 I
e Miniopterus_schreibersii.MinSch_scaffold_24116            36998 214 +     45743 I
e Miniopterus_natalensis.LDJU01000022.1                   8212509 213 +  10048721 I
e Micronycteris_hirsuta.MicHir_scaffold_37978               24387 274 -     32043 I
e Microgale_talazaci.MicTal_scaffold_34660                  41215 0 -     48017 C
e Lipotes_vexillifer.KE558548.1                            139488 0 +   3060487 C
e Lasiurus_borealis.LasBor_scaffold_59542                    5042 241 +     26176 I
e Kogia_breviceps.KogBre_flattened_line_35920               27132 184 +     37189 I
e Elephantulus_edwardii.JH947210.1                        7830035 1277 +  15467074 I
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Echinops_telfairi.JH980316.1                           22999931 2 -  44670279 I
e Desmodus_rotundus.KZ672188.1                           18700517 262 -  18957592 I
e Dasypus_novemcinctus.JH568778.1                          185121 383 -   6883506 I
e Condylura_cristata.JH655880.1                          60621918 0 +  78930452 C
e Choloepus_hoffmanni.KN194586.1                           763329 503 +    964067 I
e Choloepus_didactylus.ChoDid_scaffold_36182                18024 504 -     21363 I
e Catagonus_wagneri.CatWag_scaffold_1305                   162405 0 -    276539 C
e Carollia_perspicillata.CarPer_scaffold_4436               61226 261 +     67245 I
e Artibeus_jamaicensis.ArtJam_scaffold_41619                10440 261 -     29036 I
e Anoura_caudifer.AnoCau_scaffold_422                      392020 257 -    631301 I
e Trachypithecus_pileatus.k141_1022309                       5226 0 +     13828 C
e Trachypithecus_phayrei.ctg3                            44662914 0 -  44834318 C
e Trachypithecus_obscurus.k141_1115109                       8130 0 -     28054 C
e Trachypithecus_melamera.k141_699241                        2986 0 -     24393 C
e Trachypithecus_leucocephalus.k141_381681                   3005 0 +     12481 C
e Trachypithecus_laotum.k141_760702                          4719 0 +     14371 C
e Trachypithecus_hatinhensis.k141_504423                     6067 0 -     15592 C
e Trachypithecus_germaini.k141_868450                        3883 0 -     11566 C
e Trachypithecus_geei.k141_670367                           46082 0 -     54611 C
e Trachypithecus_francoisi.k141_768164                       4689 0 -     14244 C
e Trachypithecus_cristatus.k141_1011511                      5261 0 -     12939 C
e Trachypithecus_crepusculus.k141_1588528                   23360 0 -     32910 C
e Trachypithecus_auratus.k141_738098                        29800 0 +     38948 C
e Semnopithecus_vetulus.k141_1143185                        16479 0 +     30600 C
e Semnopithecus_schistaceus.k141_387461                     33457 0 +     42640 C
e Semnopithecus_priam.k141_410937                           40312 0 +     46263 C
e Semnopithecus_johnii.k141_785014                         121532 0 +    130994 C
e Semnopithecus_hypoleucos.k141_761524                      11528 0 +     20762 C
e Semnopithecus_entellus.k141_1572367                        6153 0 +     15331 C
e Rhinopithecus_strykeri.ctg4                            44859307 0 -  45163003 C
e Rhinopithecus_bieti.k119_554384                            2917 0 -     17045 C
e Pygathrix_nigripes_a.k141_101123                             8537 0 +     18040 C
e Pygathrix_nigripes_b.ctg79                                 6809148 0 +   6970761 C
e Pygathrix_cinerea.k141_374971                             32651 0 +     56732 C
e Presbytis_mitrata.k141_860013                              8661 0 +     14865 C
e Presbytis_comata.k141_672698                               8546 0 -     15069 C
e Pithecia_vanzolinii.k141_831006                           15424 0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514 0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521 0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292 0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093 0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038 0 +     78826 C
e Pithecia_albicans.k141_991845                             45662 0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000036.1               26743271 0 +  26888534 C
e Piliocolobus_kirkii.k141_929665                            4788 0 +      7694 C
e Piliocolobus_gordonorum.k141_1270531                       5421 0 -     17985 C
e Piliocolobus_badius.k141_1987485                           4802 0 -      5908 C
e Octodon_degus.JH651621.1                                3687420 1881 +  10294119 I
e Nasalis_larvatus.k141_153429                              11264 0 +     48152 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     91920 1922 -    117718 I
e Hystrix_cristata.HysCri_scaffold_50788                     7688 1865 +     22540 I
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 32592 1717 -     67205 I
e Colobus_polykomos.k141_1406057                            19335 0 +     23629 C
e Colobus_guereza.LG08                                  147667351 0 + 156195979 C
e Colobus_angolensis.KN985967.1                          10889423 0 +  10971483 C
e Chinchilla_lanigera.JH721867.1                         15963245 964 +  43084221 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               17289 10 +    209709 c-t-a-a-a---------a------A--------A--T--T
s Acinonyx_jubatus.LLWD01000356.1                         2039249 10 +   3721120 c-t-g-a-a---------a------a--------g--t--t
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    117491 11 -    189883 C-T-T-A-A--A------A------A--------A--A--T
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10662941 10 +  23371972 c-t-g-a-a---------a------a--------a--t--T
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7099729 10 -  16596857 c-c-g-A-A---------A------A--------A--T--T
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   21462 10 -     22067 C-T-G-G-A---------A------A--------A--T--T
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   5161 10 -     60446 C-T-A-A-A---------A------A--------A--T--T
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         5878 10 -     29318 C-T-A-A-A---------A------A--------A--T--T
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         4816 10 +     38766 C-T-A-A-A---------A------A--------A--T--T
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          5772 10 -     80423 C-T-A-A-A---------A------A--------A--T--T
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                               744 10 +     19852 C-T-A-A-A---------A------A--------A--T--T
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                3000 10 -     12443 C-T-A-A-A---------A------A--------A--T--T
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                              299 10 +      5070 C-T-A-A-A---------A------A--------A--T--T
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                   44 10 -      1641 C-T-A-A-A---------A------A--------A--T--T
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          2783 10 -     24210 C-T-A-A-A---------A------A--------A--T--T
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           29365 10 -     30219 C-T-A-A-A---------A------A--------A--T--T
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_405616                              5201 10 +     16794 C-T-A-A-A---------A------A--------A--T--T
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                             333 10 -      1470 C-T-A-A-A---------A------A--------A--T--T
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             4478 10 -      9835 C-T-A-A-A---------A------A--------A--T--T
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3525246 10 +   4113121 t-t-t-t-a---------a------a--------t--t--g
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             2677 10 +     55446 T-T-T-T-A---------A------A--------T--T--G
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 66091 10 +     78111 C-T-A-A-A---------A------A--------A--T--T
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            9037 10 +     22701 C-T-A-A-A---------A------A--------A--T--T
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5752995 10 +   9889416 c-t-a-a-a---------a------a--------a--t--t
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             9593 10 -    104377 C-T-A-A-A---------A------A--------A--T--T
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               9600 10 +     23246 C-T-A-A-A---------A------A--------A--T--T
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     2112 10 +     11424 C-T-A-A-A---------A------A--------A--T--T
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        6198 10 +      9265 C-T-G-A-A---------A------A--------A--T--T
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9542886 10 +  39197703 C-T-A-A-A---------A------A--------A--T--T
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             64159 10 +     85812 C-T-A-A-A---------A------A--------A--T--T
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                15172 10 +     89302 C-T-A-A-A---------A------A--------A--T--T
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             19673 10 -     58268 C-T-A-A-A---------A------A--------A--T--T
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             67667 10 +    119057 C-T-A-A-A---------A------A--------A--T--T
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               9636 10 -     25888 C-T-A-A-A---------A------A--------A--T--T
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                10676  7 -     16375 T-G-G-A-A---------A------A---------------
i Avahi_laniger.k141_2840928                            C 0 I 2
s Avahi_peyrierasi.k141_798820                               4292  7 +      6337 T-G-G-A-A---------A------A---------------
i Avahi_peyrierasi.k141_798820                          C 0 I 2
s Balaenoptera_acutorostrata.KI537095.1                  26383713 18 +  51448160 t-t-t-t-a---------a------attgaaaaat--t--g
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        8886 18 -     13118 t-t-t-t-a---------a------attgaaaaat--t--g
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   47708 10 -     72089 T-T-T-T-A---------A------A--------T--T--G
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   301852 10 -   6870073 t-t-t-t-a---------c------a--------t--c--G
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22955950 10 + 161108492 T-T-T-T-A---------C------A--------T--C--G
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     418215 10 +    998990 T-T-T-T-A---------C------A--------T--C--G
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22664604 10 + 158972876 T-T-T-T-A---------C------A--------T--C--G
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               674367 10 +   1914593 T-T-G-T-A---------C------A--------T--T--G
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               117541  7 -    171031 ------A-A---------A------A--------A--T--T
i Cacajao_ayresi.k141_724503                            I 2 C 0
s Cacajao_calvus.k141_96166                                 16561  7 +    125063 ------A-A---------A------A--------A--T--T
i Cacajao_calvus.k141_96166                             I 2 C 0
s Cacajao_hosomi.k141_303789                                18608  7 -    216513 ------A-A---------A------A--------A--T--T
i Cacajao_hosomi.k141_303789                            I 2 C 0
s Cacajao_melanocephalus.k141_1160263                       11151  7 -    134917 ------A-A---------A------A--------A--T--T
i Cacajao_melanocephalus.k141_1160263                   I 2 C 0
s Camelus_bactrianus.KN276303.1                           3222850 18 -   8989139 t-t-t-t-a---------a------attgaaaaat--t--g
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           400552 18 -  15254737 t-t-t-t-a---------a------attgaaaaat--t--g
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2976288 18 +   6889770 t-t-t-t-a---------a------attgaaaaat--t--g
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11526082 10 +  39901454 C-T-G-A-A---------A------A--------A--T--G
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   21056 10 +     87036 C-T-G-A-A---------A------A--------A--T--G
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11272765 10 -  35597290 C-T-G-A-A---------A------A--------A--T--G
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11095476 10 +  39895921 C-T-G-A-A---------A------A--------A--T--G
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16462261 10 -  44759192 C-T-G-A-A---------A------A--------A--T--G
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21330326 10 + 157394656 t-t-t-t-a---------a------a--------t--t--g
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135711543 10 - 157403528 t-t-t-t-a---------a------a--------t--t--g
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          313262 10 +    345090 C-T-G-A-A---------A------A--------G--T--T
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15789398 10 -  24422027 N-N-N-N-N---------N------N--------N--N--N
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15801337 10 -  24440124 t-t-g-a-a---------a------a--------a--t--t
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       179509 10 +    436027 T-T-G-A-A---------A------A--------A--T--T
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18894371 10 -  29618158 C-T-A-A-A---------A------A--------A--T--T
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                11915 10 -     26817 C-T-A-A-A---------A------A--------A--T--T
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                16159 10 +     25043 C-T-A-A-A---------A------A--------A--T--T
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                        12266 10 +     21754 C-T-G-A-A---------A------A--------G--T--T
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4367295 10 +   7569818 c-t-g-a-a---------a------a--------a--t--t
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         7052 10 -      9338 C-T-G-A-A---------A------A--------A--T--T
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6559102 10 +   6739814 C-t-a-a-a---------a------a--------a--t--t
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      30579 10 +     60454 C-T-A-A-A---------A------A--------A--T--T
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          5783 10 -     21101 C-T-A-A-A---------A------A--------A--T--T
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         63093 10 -    107033 C-T-A-A-A---------A------A--------A--T--T
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        5956 10 -     17608 C-T-A-A-C---------A------A--------A--T--T
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          3121 10 +     45019 C-T-A-A-A---------A------A--------A--T--T
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           3181 10 +     15177 C-T-A-A-C---------A------A--------A--T--T
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          6003 10 +     16677 C-T-A-A-C---------A------A--------A--T--T
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           28193 10 +     35983 C-T-A-A-A---------A------A--------A--T--T
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11994724 10 +  12117833 C-T-A-A-A---------A------A--------A--T--T
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46481485 10 +  46592721 C-T-A-A-A---------A------A--------A--T--T
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      45034 10 -     45581 C-T-A-A-C---------A------A--------A--T--T
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       6017 10 +     35577 C-T-A-A-A---------A------A--------A--T--T
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        5811 10 -     25661 C-T-A-A-A---------A------A--------A--T--T
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        5767 10 -     17744 C-T-A-A-C---------A------A--------A--T--T
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        25352 10 +     37128 C-T-A-A-C---------A------A--------A--T--T
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           62902 10 -     68416 T-G-G-A-A---------A------A--------A--T--T
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                           12003 10 +     13308 T-G-G-A-A---------A------A--------A--T--T
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             9197 11 -     18223 C-T-A-A-A---------A------A-------AA--A--T
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                               936 11 +    188999 C-TTA-A-A---------A------A--------A--A--T
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           45235 10 +     57117 C-T-A-A-A---------A------A--------A--A--T
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          49914 11 +     54541 C-T-A-A-A---------A------A-------AA--A--T
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chiropotes_israelita.k141_1189915                         74720  7 +    196370 ------A-A---------A------A--------A--T--T
i Chiropotes_israelita.k141_1189915                     I 2 C 0
s Chiropotes_sagulatus.k141_773804                          18901  7 +     40510 ------A-A---------A------A--------A--T--T
i Chiropotes_sagulatus.k141_773804                      I 2 C 0
s Chlorocebus_aethiops.ctg22                             15143537 10 -  15256731 C-T-A-A-A---------A------A--------A--T--T
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      38001 10 -     53260 C-T-A-A-A---------A------A--------A--T--T
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101148560 10 + 101219884 c-t-a-a-a---------a------a--------a--t--T
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_629495              1949 12 -      3120 A-T-G-A-A---------A----AAA--------G--T--G
i Chrysochloris_asiatica.ChrAsi_scaffold_629495         C 0 C 0
s Condylura_cristata.JH655880.1                          60621918 12 +  78930452 t-t-g-a-a---------a------a--------taat--t
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         1942 10 -      5782 ttt-a-a-a---------a------a--------a--a---
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 282355 19 -    399297 C-T-G-A-ATGATTAAAAG------A--------A--A--G
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53034725 14 +  72327488 c-t-g-a-a-----aaaaa------a--------a--a--t
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              1346  7 -     22648 C-T-G-A-A---------A------T---------------
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            57243 10 -     70449 T-T-G-A-A---------A------A--------G--T--T
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  213721 11 -    956709 C-T-G-ATA---------A------A--------A--T--T
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                20570 10 +     26546 T-T-G-A-A---------A------A--------A--T--T
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             61708 10 -    236241 C-T-G-A-A---------A------A--------A--T--T
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16848831 11 +  31942871 T-G-AAA-A---------A------A--------A--T--T
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80040338 18 -  96802777 t-t-t-t-a---------a------attgaaaaat--t--g
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 325942 10 +    993696 c-t-g-a-a---------a------a--------a--t--t
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   6583 10 +    151128 C-T-G-A-A---------A------A--------A--T--T
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dipodomys_ordii.KN672545.1                              3659900 10 +   4240102 C-T-G-A-T---------A------T--------T--T--C
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  2248 10 -     11986 C-T-G-A-T---------A------T--------T--T--C
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                39677 10 -     73477 T-T-G-A-A---------A------A--------A--T--T
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1495924 10 +   1727528 t-t-t-t-a---------a------a--------t--t--g
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        243526 14 -    369425 c-t-g-a-a-----gaaaa------a--------a--a--t
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01198462.1                           1268 14 -      1901 c-t-g-a-a-----gaaaa------a--------a--c--t
i Ellobius_talpinus.LOJH01198462.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85877200 10 +  99434291 c-t-g-a-a---------a------a--------a--t--t
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Equus_asinus.JREZ01000062.1                             5856308 10 -   7175178 t-g-g-a-a---------A------A--------C--T--T
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13354808 10 +  41866177 c-t-g-a-A---------A------A--------C--T--T
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          16298 10 +     92910 c-t-g-a-A---------A------A--------C--T--T
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11540761 10 +  16010500 C-T-G-A-G---------A------T--------A--T--T
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48780570 10 -  48907691 C-T-A-A-A---------A------A--------A--T--T
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          318556 18 +    330699 T-T-T-T-A---------A------ATTGAAAAAT--T--G
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             65013 18 +     89355 T-T-T-T-A---------T------ATTGAAAAAT--T--G
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              8985 10 +     13586 T-G-G-A-A---------A------A--------A--T--A
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_1015201                              2248 10 -      4292 T-G-G-A-A---------A------A--------A--T--T
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            15381 10 +     36558 T-G-G-A-A---------A------A--------A--T--T
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            11706 10 +     60246 T-G-G-A-A---------A------A--------A--T--T
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                15189 10 +    109717 T-G-G-A-A---------A------A--------A--T--T
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 3174 10 -     19505 T-G-G-A-A---------A------A--------A--T--T
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                19846 10 +     27497 T-G-G-A-A---------A------A--------A--T--T
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           22302 10 +     26808 T-G-G-A-A---------A------A--------A--T--T
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                37037 10 +     46535 T-G-G-A-A---------A------A--------A--T--A
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              19776 10 -     29447 T-G-G-A-A---------A------A--------A--T--T
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129898676 10 - 159252932 c-t-g-a-a---------a------a--------g--t--t
i Felis_catus.CM001386.2                                C 0 I 425
s Felis_catus_fca126.CM031420.1                         129285644 10 - 158578461 c-t-g-a-a---------a------a--------g--t--t
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 26743 10 +     52776 C-T-G-A-A---------A------A--------G--T--T
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13895853 10 -  19261668 c-t-g-a-a---------a------a--------a--t--t
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     215039 10 -    847004 C-T-G-A-A---------A------A--------A--T--T
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           17400 10 -     43889 C-T-G-A-A---------A------A--------A--T--T
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          14543 10 +     27357 C-T-G-A-A---------A------A--------A--T--T
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               159282 10 +    324696 C-T-G-A-A---------A------A--------A--A--T
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    185722 10 -    189561 t-t-t-t-a---------a------a--------t--t--g
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           16177 10 -     18683 C-T-G-A-A---------A------A--------A--T--C
i Glis_glis.GliGli_scaffold_79770                       I 31 C 0
s Gorilla_beringei.k141_111300                               8993 10 -     14630 C-T-A-A-A---------A------A--------A--T--T
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119656093 10 - 195582420 C-T-A-A-A---------A------A--------A--T--T
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   79522 10 +    118900 C-A-G-T-A---------A------A--------A--T--C
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         5769 10 +     10286 T-G-G-A-A---------A------A--------A--T--T
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             4247 10 -     11661 T-G-G-A-A---------A------A--------A--T--T
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             9574 10 +     56096 T-G-G-A-A---------A------A--------A--T--T
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        32823 10 -     42470 T-G-G-A-A---------A------A--------A--T--T
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        49449 10 -     54384 T-G-G-A-A---------A------A--------A--T--T
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              22384 10 +     53719 T-T-G-A-A---------A------A--------G--T--T
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                32596 10 -     91191 T-T-T-T-A---------A------A--------T--T--G
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2560372 10 +  31725842 C-C-A-A-A---------C------A--------G--T--G
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               62582 11 +     73687 A-T-G-A-A---------A-----AA--------C--T--A
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              150336 18 +    277961 T-T-T-T-A---------A------ATTGAAAAAT--T--G
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      282748 11 -    477199 ttt-a-a-a---------a------a--------a--t--g
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959                517 11 +     26078 TTT-A-A-A---------A------A--------A--T--G
i Hipposideros_galeritus.HipGal_scaffold_52959          C 0 C 0
s Hoolock_leuconedys.ctg315                                   349991 10 +    431944 C-T-A-A-A---------A------A--------A--T--T
i Hoolock_leuconedys.ctg315                                C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 22980 10 -     67322 T-T-G-A-A---------A------A--------G--T--T
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           20965 10 -    119109 T-G-G-A-A---------A------A--------A--T--T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_1816750                             1472 10 +      3202 C-T-A-A-A---------A------A--------A--T--T
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1633646                              1442 10 -      2102 C-T-A-A-A---------A------A--------A--T--T
i Hylobates_agilis.k141_1633646                         C 0 C 0
s Hylobates_klossii.k141_468230                              2959 10 +      5464 C-T-A-A-A---------A------A--------A--T--T
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14628307 10 -  25970782 C-T-A-A-A---------A------A--------A--T--T
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                             858 10 +      4161 C-T-A-A-A---------A------A--------A--T--T
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             36415 10 -     60944 a-t-a-a-a---------a------a--------a--t--T
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7130091 10 +  13083262 c-t-g-a-a---------g------a--------a--C--T
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   1248  7 +      3484 T-G-A-A-A---------A------A---------------
i Indri_indri.k141_2197838                              C 0 I 2
s Inia_geoffrensis.IniGeo_flattened_line_66725              12550 18 +     17520 T-T-T-T-A---------A------ATTGAAAAAT--T--T
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8577146 10 +  11848649 C-T-G-A-A---------A------A--------A--T--T
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Lagothrix_lagothricha.k141_12968                          53755 10 -    147782 C-T-A-A-A---------A------A--------A--T--T
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lemur_catta.scaffold_1                                258411121 10 - 285822530 T-G-G-A-A---------A------A--------A--T--T
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        28424 10 +     39228 T-G-G-A-A---------A------A--------A--T--T
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            57788 10 +     63517 T-G-G-A-A---------A------A--------A--T--T
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        36168 10 -     38897 T-G-G-A-A---------A------A--------A--T--T
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      2214 10 -     13103 T-G-G-A-A---------A------A--------A--T--T
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3091164 10 -   3498232 c-t-g-a-a---------a------a--------a--t--t
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    18669 10 +     22452 a-t-g-a-a---------g------a--------a--t--t
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            139488 14 +   3060487 --------A---------A------ATTGAAAAAT--T--G
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19252190 10 +  19376315 C-T-A-A-A---------A------A--------A--T--T
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           14981 10 +     84689 C-T-G-A-A---------A------A--------A--T--T
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3782720 10 +   6799190 C-T-G-A-A---------A------A--------A--T--T
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20598502 16 -  62548349 c-t-g-a-a---------aaaaaaaa--------a--t--g
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11094932 10 +  39895028 C-T-G-A-A---------A------A--------A--T--G
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             23941 10 +     74745 C-T-A-A-A---------A------A--------A--T--T
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12710402 10 +  12821369 C-T-A-A-A---------A------A--------A--T--T
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                2976 10 -     26467 C-T-A-A-A---------A------A--------A--T--T
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           50847 10 +     63263 C-T-A-A-A---------A------A--------A--T--T
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 2957 10 -     26361 C-T-A-A-A---------A------A--------A--T--T
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 6147 10 -      7381 C-T-A-A-A---------A------A--------A--T--T
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  49376 10 -     79256 C-T-A-A-A---------A------A--------A--T--T
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196039474 10 + 196197964 C-T-A-A-A---------A------A--------A--T--T
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11449644 10 +  11645122 c-t-a-a-a---------a------a--------a--t--T
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   8330 10 -     46448 C-T-A-A-A---------A------A--------A--T--T
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                5992 10 -     13212 C-T-A-A-A---------A------A--------A--T--T
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 19673 10 -     55006 C-T-A-A-A---------A------A--------A--T--T
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43844788 10 +  43892939 C-T-A-A-A---------A------A--------A--T--T
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               20956 10 -     24607 C-T-A-A-A---------A------A--------A--T--T
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               8327 10 -     27140 C-T-A-A-A---------A------A--------A--T--T
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43441363 10 -  43563597 C-T-A-A-A---------A------A--------G--T--T
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4454167 10 -   4543643 C-T-A-A-A---------A------A--------A--T--T
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            149367 15 +    252755 c-t-g-a-a---------aaaaaa-a--------a--t--g
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             39515 13 +     58827 c-t-g-a-a---------aaaa---a--------a--t--g
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36877960 10 +  64221397 c-t-g-g-A---------G------A--------A--C--T
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       65154 13 -    234502 CTA-A-A-A---------T------A--------A--TTTA
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             6083 10 -     87323 C-C-G-A-A---------A------A--------A--T--T
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                  982 13 +    115071 C-T-T-A-A--A------A----AAA--------T--A--T
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1051250 10 -  26018355 c-t-g-a-a---------a------t--------a--t--t
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    2139 18 -     12939 T-T-T-T-A---------A------ATTGAAAAAT--T--G
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16514184 10 +  47401472 t-t-g-a-a---------a------a--------a--t--t
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  41215  8 -     48017 --------A---------A----AAA--------C--C--A
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22823936  5 -  98408828 C-T-G-a-a--------------------------------
i Microtus_ochrogaster.CM001673.1                       C 0 I 8
s Miopithecus_ogouensis.k141_2935907                         5909 10 +     29742 C-T-A-A-A---------A------A--------A--T--T
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        16660 10 -    104932 C-T-G-A-A---------A------A--------A--T--T
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     4866 10 -     12809 T-G-G-A-A---------A------A--------A--T--T
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 149931 18 +    154973 T-T-T-T-A---------A------ATTGAAAAAT--T--G
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  5942 10 -     19904 T-T-T-T-A---------A------A--------T--T--G
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  150065 10 -    168139 T-T-G-A-A---------A------A--------G--T--T
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Mus_caroli.LT608236.1                                  70771555 11 +  92629107 c-t-t-a-a--------aa------a--------t--a--t
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75493608 11 +  98207768 c-t-t-a-a--------aa------a--------t--a--t
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67559985 11 +  89017189 c-t-t-a-a--------aa------a--------t--a--c
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74336335 11 +  97876770 c-t-t-a-a--------aa------a--------t--a--t
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             14621 10 +     98495 c-a-c-a-c---------a------a--------a--t--c
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4427928 10 -  28371801 c-t-g-a-a---------a------a--------a--t--t
i Mustela_putorius.JH417978.1                           C 0 C 0
s Nannospalax_galili.KL201303.1                            120086 16 +    362372 c-t-g-a-a---aaaaaaa------a--------a--a--t
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4490059 10 -  14209539 c-t-g-a-a---------a------a--------a--t--t
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3954522 18 -   4490290 t-t-t-t-a---------a------attgaaaaat--t--g
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Nomascus_annamensis.k141_1817463                            598 10 -      1070 C-T-A-A-A---------A------A--------A--T--T
i Nomascus_annamensis.k141_1817463                      C 0 C 0
s Nomascus_concolor.k141_70405                                598 10 +      1153 C-T-A-A-A---------A------A--------A--T--T
i Nomascus_concolor.k141_70405                          C 0 C 0
s Nomascus_gabriellae.k141_1400361                            531  7 -      2203 ------A-A---------A------A--------A--T--T
i Nomascus_gabriellae.k141_1400361                      I 2 C 0
s Nomascus_siki_b.tarseq_1022                             552 10 -     11638 C-T-A-A-A---------A------A--------A--T--T
i Nomascus_siki_b.tarseq_1022                       C 0 I 10
s Nomascus_siki_a.k141_421408                                   442 10 +     16235 C-T-A-A-A---------A------A--------A--T--T
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                37796 11 +   3668941 c-t-g-a-a---------a------a--------aa-t--g
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65571550 10 -  95554990 C-T-G-A-A---------A------A--------A--T--T
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_771591                            14959 10 +     16181 C-T-G-A-A---------A------A--------A--T--T
i Nycticebus_coucang.k141_771591                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65679761 10 +  89412551 c-t-g-a-a---------a------a--------a--t--t
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4998968 10 -  23139505 t-t-g-a-a---------g------g--------a--t--t
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Odobenus_rosmarus.KB229369.1                             684761 10 -   3126709 c-t-g-a-a---------a------a--------a--t--t
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1083374 10 +   1425656 t-t-t-t-a---------a------a--------t--t--g
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         41457 10 +     78940 t-t-t-t-a---------a------a--------t--t--g
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  130126 14 +    145789 C-T-G-A-A-GA--AA--A------A--------A--A--T
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  42816 15 +     62360 C-T-T-A-A--A--AAAAA------A--------A--A--T
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7228198 18 -   7562323 t-t-t-t-a---------a------attgaaaaat--t--g
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              63985 12 -     66828 C-T-G-A-A---------G----AAA--------A--T--G
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141881687 10 + 163896628 a-t-g-a-a---------g------a--------a--t--t
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      314935 10 -    505867 c-t-g-a-a---------a------a--------a--t--g
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        4899 10 -     53940 C-T-G-A-A---------A------A--------A--T--T
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18012872 10 -  38779656 c-t-g-a-a---------a------a--------a--t--t
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134082386 10 - 275406953 t-t-t-t-a---------t------a--------t--t--g
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      83614 10 +    140051 T-T-T-T-A---------A------A--------T--T--G
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127578272 10 - 205426864 c-t-a-a-a---------a------t--------a--t--t
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120155432 10 - 196562556 C-T-A-A-A---------A------A--------A--T--T
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  39663 10 +    295523 C-T-G-A-A---------A------A--------G--T--T
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3643478 10 +  18214204 c-t-g-a-a---------a------a--------g--t--t
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5033126 10 -   6340057 c-t-g-a-a---------a------a--------g--t--t
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1071255 10 -   1292953 t-t-t-t-a---------a------a--------t--c--g
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188160152 10 - 188283584 C-T-A-A-A---------A------A--------A--T--T
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              3242 10 +     25005 C-T-A-A-A---------A------A--------A--T--T
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47517524 10 +  47705337 C-T-A-A-A---------A------A--------A--T--T
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 71515 10 -    104429 C-T-A-A-A---------A------A--------A--T--T
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   10047 10 +     14967 C-T-A-A-A---------A------A--------A--T--T
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 5912 10 -      7628 C-T-A-A-A---------A------A--------A--T--T
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    121161 10 -    135482 C-A-G-A-A---------A------A--------G--T--T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          10569 10 -     23713 G-T-G-A-A---------A------A--------A--A--T
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           11709 10 +     61070 G-T-G-A-A---------A------A--------A--A--T
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       1992  4 +     49596 C-T-G-A----------------------------------
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 I 5
s Peromyscus_maniculatus.KI615518.1                       4955183 14 -   8017169 c-t-t-a-a-----aaaaa------a--------a--a--t
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    17043 10 -     36578 A-T-G-A-G---------A------C--------A--T--T
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              2663 18 +      8220 T-T-T-T-A---------A------ATTGAAAAAT--T--G
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           9134 18 +     21690 T-T-T-T-A---------A------ATTGAAAAAT--T--G
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       25846 11 +     44506 C-T-A-A-A--A------A------A--------A--T--T
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        26059 11 +     67491 C-T-A-A-A--A------A------A--------A--T--T
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      16298 11 -     98129 C-T-A-A-A--A------A------A--------A--T--T
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     25898 12 +    147771 C-T-AAA-A--A------A------A--------A--T--T
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         2534 11 -     43940 C-T-A-A-A--A------A------A--------A--T--T
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          6617 11 -     55515 C-T-A-A-A--A------A------A--------A--T--T
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         25971 11 +    152463 C-T-A-A-A--A------A------A--------A--T--T
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       3779 11 -    119457 C-T-A-A-A--A------A------A--------A--T--T
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         15694 11 +    134592 C-T-A-A-A--A------A------A--------A--T--T
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          26281 11 -     75465 C-T-A-A-A--A------A------A--------A--T--T
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              190895 10 -    373494 C-T-A-A-A---------A------A--------A--T--T
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19811542 10 +  19899266 C-T-A-A-A---------A------A--------A--T--T
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                3688 11 -      9567 A-T-G-A-A---------A-----AA--------C--T--G
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6852495 10 +  12164890 t-g-g-a-a---------a------a--------a--t--t
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     21525  7 -     30946 t-g-g-a-a---------a------a---------------
i Propithecus_coquerelli.NW_012147863.1                 C 0 I 2
s Propithecus_coronatus.k141_1353159                         7581  7 +     11805 T-G-G-A-A---------A------A---------------
i Propithecus_coronatus.k141_1353159                    C 0 I 2
s Propithecus_diadema.k141_577245                           46929  7 +     52369 T-G-G-A-A---------A------A---------------
i Propithecus_diadema.k141_577245                       C 0 I 2
s Propithecus_edwardsi.k141_1317105                         39316  7 -     44753 T-G-G-A-A---------A------A---------------
i Propithecus_edwardsi.k141_1317105                     C 0 I 2
s Propithecus_perrieri.k141_7554                            21239  7 +     27322 T-G-G-A-A---------A------A---------------
i Propithecus_perrieri.k141_7554                        C 0 I 2
s Propithecus_tattersalli.k141_907138                       20873  7 -     53241 T-G-G-A-A---------A------A---------------
i Propithecus_tattersalli.k141_907138                   C 0 I 2
s Propithecus_verreauxi.k141_158021                         43137  7 -     48185 T-G-G-A-A---------A------A---------------
i Propithecus_verreauxi.k141_158021                     C 0 I 2
s Psammomys_obesus.NESX01026517.1                           37979 13 +     77221 c-t-t-a-a--------aaaa----a--------a--a--t
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        250051 10 -    344369 C-T-G-A-A---------A------A--------A--T--T
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Puma_concolor.QAVW01000427.1                          131539774 10 - 161321710 c-t-g-a-a---------a------a--------g--t--t
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                20238 10 +     68503 T-T-T-T-A---------A------A--------T--T--G
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13917394  4 +  90463843 c-C-A-A----------------------------------
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1792348 11 +   2252614 ctg-a-a-a---------a------a--------a--t--g
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_1069354                      234 14 -       709 t-t-t-t-a-----tttta------t--------t--t--t
i Saiga_tatarica.SaiTat_scaffold_1069354                C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15676304 10 -  43202129 c-t-a-a-a---------a------a--------a--t--t
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        8217 10 +     34089 C-T-A-A-A---------A------A--------A--T--T
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              8157 10 -     60842 C-T-A-A-A---------A------A--------A--T--T
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              8251 10 +     67014 C-T-A-A-A---------A------A--------A--T--T
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              8228 10 +     60816 C-T-A-A-A---------A------A--------A--T--T
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 8165 10 -     76454 C-T-A-A-A---------A------A--------A--T--T
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17344952 10 -  30362882 C-T-A-A-A---------A------A--------A--T--T
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         24273 10 -     62485 C-T-A-A-A---------A------A--------A--T--T
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   39380 12 -    114521 T-T-A-A-A---------A------A--------TAAT--T
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  104747 13 -    120886 C-T-G-A-A--A--AA--A------A--------A--A--T
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            23307 10 +    739146 C-T-G-A-A---------A------A--------G--T--G
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17769769  7 -  27805282 C-T-G-A-A---------A------T---------------
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2243796 10 +   2842873 c-t-g-a-a---------g------a--------a--C--T
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             238570 10 -    276980 C-T-G-A-A---------A------A--------G--T--T
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            32735 10 +     62062 T-T-G-A-A---------A------A--------G--T--T
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 I 246
s Sus_scrofa.CM000824.4                                 189274757  1 + 218635234 T----------------------------------------
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        18565 10 -  13920577 C-T-A-A-A---------A------A--------G--T--T
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      810532 10 +   1148477 C-T-G-A-A---------A------A--------A--A--T
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  61174 10 +     99546 C-T-G-A-A---------A------A--------A--T--T
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               31119 10 +     42269 C-T-G-A-A---------A------A--------A--T--T
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               64428 10 +     65473 C-T-G-A-A---------A------A--------A--T--T
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194011685 10 - 194193292 C-T-A-A-A---------A------A--------A--T--T
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   9270 10 +     90398 T-T-T-T-A---------A------A--------T--T--G
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16089579 13 +  31416278 c-t-g-a-a---------aaaa---a--------a--t--g
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2797511  6 -   3938065 t-t-g-a-a---------a----------------------
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    9440  6 +     13056 T-T-G-A-A---------A----------------------
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69316927 18 -  96451834 t-t-t-t-a---------a------attgaaaaat--t--g
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   9909  8 +     10241 C-T-G-A-A---------A------A--------A------
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 I 1
s Ursus_maritimus.KK498671.1                              6520235 10 +  28682327 c-t-g-a-a---------a------a--------a--t--c
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  9137 10 -     20643 T-G-G-A-A---------A------A--------A--T--T
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             28672 10 -     33872 T-G-G-A-A---------A------A--------A--T--T
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1527960 18 -   2331223 t-t-t-t-a---------a------attgaaaaat--t--g
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                144162 10 -    281493 C-T-G-A-A---------A------A--------A--T--G
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       131293 10 -    134049 C-T-G-A-A---------A------A--------A--T--T
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        219617 10 -    227762 c-t-g-a-a---------a------a--------a--t--T
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_256618                      232 10 -      2259 C-T-G-G-A---------A------A--------G--T--T
i Zapus_hudsonius.ZapHud_scaffold_256618                C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            1671 18 -     13665 t-t-t-t-a---------a------attgaaaaat--t--g
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Eptesicus_fuscus.JH977687.1                             4708429 237 +   6522550 I
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Dinomys_branickii.DinBra_scaffold_1996                   158442 1030 +    228994 I
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           4051 456 -      6963 I
e Tonatia_saurophila.TonSau_scaffold_3334                  137563 275 -    259118 I
e Tamandua_tetradactyla.TamTet_scaffold_26877               16259 379 +     45698 I
e Tadarida_brasiliensis.TadBra_scaffold_61492                1822 242 +     20549 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Pteronotus_parnellii.KE867983.1                            5588 252 -     27784 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             6589 379 -      8794 I
e Myotis_myotis.MyoMyo_scaffold_6123                        13515 236 +     66751 I
e Myotis_lucifugus.GL429887.1                             3468272 238 -   3747815 I
e Myotis_davidii.KB114863.1                               5022194 233 +   6462685 I
e Myotis_brandtii.KE161952.1                               970769 237 +   8389877 I
e Murina_feae.MurFea_scaffold_2254                          23900 236 -    100666 I
e Mormoops_blainvillei.MorMeg_scaffold_2952                162937 259 +    265003 I
e Miniopterus_schreibersii.MinSch_scaffold_24116            36998 214 +     45743 I
e Miniopterus_natalensis.LDJU01000022.1                   8212509 213 +  10048721 I
e Micronycteris_hirsuta.MicHir_scaffold_37978               24387 274 -     32043 I
e Lasiurus_borealis.LasBor_scaffold_59542                    5042 241 +     26176 I
e Kogia_breviceps.KogBre_flattened_line_35920               27132 184 +     37189 I
e Elephantulus_edwardii.JH947210.1                        7830035 1277 +  15467074 I
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Echinops_telfairi.JH980316.1                           22999931  2 -  44670279 I
e Desmodus_rotundus.KZ672188.1                           18700517 262 -  18957592 I
e Dasypus_novemcinctus.JH568778.1                          185121 383 -   6883506 I
e Choloepus_hoffmanni.KN194586.1                           763329 503 +    964067 I
e Choloepus_didactylus.ChoDid_scaffold_36182                18024 504 -     21363 I
e Catagonus_wagneri.CatWag_scaffold_1305                   162405  0 -    276539 C
e Carollia_perspicillata.CarPer_scaffold_4436               61226 261 +     67245 I
e Artibeus_jamaicensis.ArtJam_scaffold_41619                10440 261 -     29036 I
e Anoura_caudifer.AnoCau_scaffold_422                      392020 257 -    631301 I
e Trachypithecus_pileatus.k141_1022309                       5226  0 +     13828 C
e Trachypithecus_phayrei.ctg3                            44662914  0 -  44834318 C
e Trachypithecus_obscurus.k141_1115109                       8130  0 -     28054 C
e Trachypithecus_melamera.k141_699241                        2986  0 -     24393 C
e Trachypithecus_leucocephalus.k141_381681                   3005  0 +     12481 C
e Trachypithecus_laotum.k141_760702                          4719  0 +     14371 C
e Trachypithecus_hatinhensis.k141_504423                     6067  0 -     15592 C
e Trachypithecus_germaini.k141_868450                        3883  0 -     11566 C
e Trachypithecus_geei.k141_670367                           46082  0 -     54611 C
e Trachypithecus_francoisi.k141_768164                       4689  0 -     14244 C
e Trachypithecus_cristatus.k141_1011511                      5261  0 -     12939 C
e Trachypithecus_crepusculus.k141_1588528                   23360  0 -     32910 C
e Trachypithecus_auratus.k141_738098                        29800  0 +     38948 C
e Semnopithecus_vetulus.k141_1143185                        16479  0 +     30600 C
e Semnopithecus_schistaceus.k141_387461                     33457  0 +     42640 C
e Semnopithecus_priam.k141_410937                           40312  0 +     46263 C
e Semnopithecus_johnii.k141_785014                         121532  0 +    130994 C
e Semnopithecus_hypoleucos.k141_761524                      11528  0 +     20762 C
e Semnopithecus_entellus.k141_1572367                        6153  0 +     15331 C
e Rhinopithecus_strykeri.ctg4                            44859307  0 -  45163003 C
e Rhinopithecus_bieti.k119_554384                            2917  0 -     17045 C
e Pygathrix_nigripes_a.k141_101123                             8537  0 +     18040 C
e Pygathrix_nigripes_b.ctg79                                 6809148  0 +   6970761 C
e Pygathrix_cinerea.k141_374971                             32651  0 +     56732 C
e Presbytis_mitrata.k141_860013                              8661  0 +     14865 C
e Presbytis_comata.k141_672698                               8546  0 -     15069 C
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000036.1               26743271  0 +  26888534 C
e Piliocolobus_kirkii.k141_929665                            4788  0 +      7694 C
e Piliocolobus_gordonorum.k141_1270531                       5421  0 -     17985 C
e Piliocolobus_badius.k141_1987485                           4802  0 -      5908 C
e Octodon_degus.JH651621.1                                3687420 1881 +  10294119 I
e Nasalis_larvatus.k141_153429                              11264  0 +     48152 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     91920 1922 -    117718 I
e Hystrix_cristata.HysCri_scaffold_50788                     7688 1865 +     22540 I
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 32592 1717 -     67205 I
e Colobus_polykomos.k141_1406057                            19335  0 +     23629 C
e Colobus_guereza.LG08                                  147667351  0 + 156195979 C
e Colobus_angolensis.KN985967.1                          10889423  0 +  10971483 C
e Chinchilla_lanigera.JH721867.1                         15963245 964 +  43084221 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               17299 10 +    209709 GCTAT--A-----TT-AT
s Acinonyx_jubatus.LLWD01000356.1                         2039259  7 +   3721120 ACTAC--C-----T----
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    117502  8 -    189883 GCTAC--C-----T---T
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 I 2
s Ailuropoda_melanoleuca.LNAT01000321.1                  10662951  7 +  23371972 ACTAC--T-----T----
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7099739  7 -  16596857 ACTAC--T-----T----
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   21472  3 -     22067 GCT---------------
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   5171 10 -     60446 GCTAT--T-----TT-AT
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         5888 10 -     29318 GCTAT--T-----TT-AT
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         4826 10 +     38766 GCTAT--T-----TT-AT
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          5782 10 -     80423 GCTAT--T-----TT-AT
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                               754 10 +     19852 ACTAT--T-----TC-AT
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                3010 10 -     12443 ACTAT--T-----TC-AT
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                              309 10 +      5070 ACTAT--T-----TC-AT
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                   54 10 -      1641 ACTAT--T-----TC-AT
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          2793 10 -     24210 ACTAT--T-----TC-AT
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           29375 10 -     30219 ACTAT--T-----TC-AT
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_405616                              5211 10 +     16794 ACTAT--T-----TC-AT
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                             343 10 -      1470 ACTAT--T-----TC-AT
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             4488 10 -      9835 ACTAT--T-----TC-AT
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3525256  9 +   4113121 ctatt--t-----T--GT
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             2687  9 +     55446 CTATT--T-----T--AT
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 66101 10 +     78111 GCTAT--T-----TT-AT
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            9047 10 +     22701 GCTAT--T-----TT-AT
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5753005 10 +   9889416 gctat--t-----tt-at
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             9603 10 -    104377 GCTAT--T-----TT-AT
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               9610 10 +     23246 GCTAT--T-----TT-AT
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     2122 10 +     11424 GTCAT--TTT---A---T
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        6208 10 +      9265 ACCAT--C-----TT-AT
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9542896 10 +  39197703 GCTAT--T-----TT-AT
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             64169 10 +     85812 GCTAT--T-----TT-AT
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                15182 10 +     89302 GCTAT--T-----TT-AT
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             19683 10 -     58268 GCTAT--T-----TT-AT
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             67677 10 +    119057 GCTAT--T-----TT-AT
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               9646 10 -     25888 GCTAT--T-----TT-AT
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                10685 10 -     16375 ACTAT--T-----TT-AA
i Avahi_laniger.k141_2840928                            I 2 C 0
s Avahi_peyrierasi.k141_798820                               4301 10 +      6337 ACTAT--T-----TT-AA
i Avahi_peyrierasi.k141_798820                          I 2 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26383731  9 +  51448160 cTATT--T-----T--AT
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        8904  9 -     13118 cTATT--T-----T--AT
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   47718  9 -     72089 CTGTT--T-----T--AT
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   301862  9 -   6870073 CTATT--T-----T--AT
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22955960  9 + 161108492 CTATT--T-----T--AT
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     418225  9 +    998990 CTATT--T-----T--AT
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22664614  9 + 158972876 CTATT--T-----T--AT
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               674377  9 +   1914593 CTATT--T-----T--AT
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               117548 10 -    171031 GCTAT--T-----TT-AT
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 16568 10 +    125063 GCTAT--T-----TT-AT
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                18615 10 -    216513 GCTAT--T-----TT-AT
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       11158 10 -    134917 GCTAT--T-----TT-AT
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3222868  9 -   8989139 cTATT--T-----T--AC
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           400570  9 -  15254737 cTATT--T-----T--AC
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2976306  9 +   6889770 cTATT--T-----T--AC
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11526092  7 +  39901454 ACTAC--T-----T----
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   21066  7 +     87036 ACTAC--T-----T----
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11272775  7 -  35597290 ACTAC--T-----T----
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11095486  7 +  39895921 ACTAC--T-----T----
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16462271  7 -  44759192 ACTAC--T-----T----
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21330336  9 + 157394656 ctatt--t-----T--GT
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135711553  9 - 157403528 ctatT--T-----T--GT
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          313272 10 +    345090 GCTAT--T-----TC-AT
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   162405  7 -    276539 --ATT--T-----T--AC
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15789408 10 -  24422027 NNNNNNNN-----N---N
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15801347 10 -  24440124 actatttt-----a---c
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       179519 10 +    436027 ACTATTTT-----A---C
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18894381 10 -  29618158 GCTAT--T-----TT-AT
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                11925 10 -     26817 GCTAT--T-----TT-AT
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                16169 10 +     25043 GCTAT--T-----TT-AT
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                        12276 10 +     21754 GCTAT--T-----TC-AT
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4367305 10 +   7569818 gCTAT--TT----T--AT
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         7062 10 -      9338 GCTAT--TT----T--AT
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6559112 10 +   6739814 gctat--t-----tt-at
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      30589 10 +     60454 GCTAT--T-----TT-AT
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          5793 10 -     21101 GCTAT--T-----TT-AT
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         63103 10 -    107033 GCTAT--T-----TT-AT
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        5966 10 -     17608 GCTAT--T-----TT-AT
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          3131 10 +     45019 GCTAT--T-----TT-AT
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           3191 10 +     15177 GCTAT--T-----TT-AT
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          6013 10 +     16677 GCTAT--T-----TT-AT
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           28203 10 +     35983 TCTAT--T-----TT-AT
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11994734 10 +  12117833 GCTAT--T-----TT-AT
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46481495 10 +  46592721 TCTAT--T-----TT-AT
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      45044 10 -     45581 GCTAT--T-----TT-AT
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       6027 10 +     35577 GCTAT--T-----TT-AT
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        5821 10 -     25661 GCTAT--T-----TT-AT
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        5777 11 -     17744 GCTAT--T-----TTTAT
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        25362 10 +     37128 GCTAT--T-----TT-AT
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           62912 10 -     68416 TCTAT--T-----TT-AT
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                           12013 10 +     13308 TCTAT--T-----TT-AT
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             9208 10 -     18223 GCTAT--T-----TT-AT
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                               947 10 +    188999 GCTAT--T-----TT-AT
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           45245 10 +     57117 GCTAT--T-----TT-AT
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          49925 10 +     54541 GCTAT--T-----TT-AT
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chiropotes_israelita.k141_1189915                         74727 10 +    196370 GCTAT--T-----TT-AT
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          18908 10 +     40510 GCTAT--T-----TT-AT
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15143547 10 -  15256731 GCTAT--T-----TT-AT
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      38011 10 -     53260 GCTAT--T-----TT-AT
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101148570 10 + 101219884 GCTAT--T-----TT-AT
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_629495              1961  9 -      3120 CTGTT--T-----C--AT
i Chrysochloris_asiatica.ChrAsi_scaffold_629495         C 0 C 0
s Condylura_cristata.JH655880.1                          60621930  7 +  78930452 at--t--g-----t--gt
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         1952  2 -      5782 ----------------at
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 282374  8 -    399297 ACTAT--T-----T---T
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 I 2
s Cricetulus_griseus.LT883672.1                          53034739  8 +  72327488 gtttt--t-----t---a
i Cricetulus_griseus.LT883672.1                         C 0 I 2
s Crocidura_indochinensis.CroInd_scaffold_27484              1353  9 -     22648 AGTAT--T-----T--AA
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            57253  7 -     70449 ACTAC--T-----T----
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  213732  6 -    956709 GCCAT--T----------
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 I 1
s Cuniculus_paca.CunPac_flattened_line_16637                20580 10 +     26546 ACTATTTT-----A---C
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             61718 10 -    236241 ACTATTTT-----A---C
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16848842 10 +  31942871 GCTAT--T-----TT-GT
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80040356  9 -  96802777 ctatt--t-----t--aT
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 325952 10 +    993696 gctat--t----tt--aT
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   6593 10 +    151128 GCTAT--TT----T--AT
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dipodomys_ordii.KN672545.1                              3659910 10 +   4240102 TCTATTTT-----G---T
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  2258 10 -     11986 TCTATTTT-----G---T
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                39687 10 -     73477 ACTATTTT-----A---C
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1495934  9 +   1727528 ctatt--t-----t--at
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        243540  8 -    369425 gcttt--t-----t---a
i Ellobius_lutescens.LOEQ01003611.1                     C 0 I 2
s Ellobius_talpinus.LOJH01198462.1                           1282  8 -      1901 GCTTT--T-----T---A
i Ellobius_talpinus.LOJH01198462.1                      C 0 I 2
s Enhydra_lutris.KZ291749.1                              85877210  7 +  99434291 acTAC--T-----T----
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Equus_asinus.JREZ01000062.1                             5856318 10 -   7175178 GCTAT--TT----T--GT
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13354818 10 +  41866177 GCTAT--TT----T--GT
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          16308 10 +     92910 GCTAT--TT----T--GT
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11540771 10 +  16010500 GCTAC--T----GT--GT
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48780580 10 -  48907691 GCTAT--T-----TT-AT
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          318574  9 +    330699 CTATT--T-----T--AT
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             65031  9 +     89355 CTATT--T-----T--AT
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              8995 10 +     13586 GCTAT--T-----TT-AT
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_1015201                              2258 10 -      4292 GCTAT--T-----TT-AT
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            15391 10 +     36558 GCTAT--T-----TT-AT
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            11716 10 +     60246 GCTAT--T-----TT-AT
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                15199 10 +    109717 GCTAT--T-----TT-AT
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 3184 10 -     19505 GCTAT--T-----TT-AT
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                19856 10 +     27497 GCTAT--T-----TT-AT
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           22312 10 +     26808 GCTAT--T-----TT-AT
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                37047 10 +     46535 GCTAT--T-----TT-AT
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              19786 10 -     29447 GCTAT--T-----TT-AT
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.AANG03133801.1                                  305  7 -       736 ACTAC--T-----T----
i Felis_catus.AANG03133801.1                            n 425 C 0
s Felis_catus_fca126.CM031420.1                         129285654  7 - 158578461 ACTAC--T-----T----
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 26753  7 +     52776 ACTAC--T-----T----
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13895863 10 -  19261668 actATGTT-----A---C
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     215049 10 -    847004 ACCAT--T-----TT-AT
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           17410 10 -     43889 ACCAT--T-----TT-AT
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          14553 10 +     27357 ACCAT--T-----TT-AT
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               159292 10 +    324696 GCTAT--T-----TT-TT
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 I 1
s Giraffa_tippelskirchi.LVKQ01S012154.1                    185732  9 -    189561 ctgTT--T-----T--AT
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           16187 10 -     18683 GCAAT--TGT---A---T
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               9003 10 -     14630 GCTAT--T-----TT-AT
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119656103 10 - 195582420 GCTAT--T-----TT-AT
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   79532 10 +    118900 ACTAT--TGT---A---T
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         5779 10 +     10286 GTTAT--T-----TT-AT
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             4257 10 -     11661 GTTAT--T-----TT-AT
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             9584 10 +     56096 GTTAT--T-----TT-AT
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        32833 10 -     42470 GTTAT--T-----TT-AT
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        49459 10 -     54384 GTTAT--T-----TT-AT
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              22394  7 +     53719 ATTAC--T-----A----
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                32606  9 -     91191 CTATT--T-----T--AT
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2560382  8 +  31725842 ACT--GTT-----A---C
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               62593  9 +     73687 TCATT--T-----T--AT
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              150354  9 +    277961 CTATT--T-----T--AT
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      282759  9 -    477199 gtatt--t-----t--ac
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959                528  9 +     26078 GTATT--T-----T--AT
i Hipposideros_galeritus.HipGal_scaffold_52959          C 0 C 0
s Hoolock_leuconedys.ctg315                                   350001 10 +    431944 GCTAT--T-----TT-AT
i Hoolock_leuconedys.ctg315                                C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 22990  7 -     67322 ACTGC--T-----T----
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           20975 10 -    119109 ACTGTTTT-----A---T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_1816750                             1482 10 +      3202 GCTAT--T-----TT-AT
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1633646                              1452 10 -      2102 GCTAT--T-----TT-AT
i Hylobates_agilis.k141_1633646                         C 0 C 0
s Hylobates_klossii.k141_468230                              2969 10 +      5464 GCTAT--T-----TT-AT
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14628317 10 -  25970782 GCTAT--T-----TT-AT
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                             868 10 +      4161 GCTAT--T-----TT-AT
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             36425 10 -     60944 GCTAT--T-----TT-AT
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7130101 10 +  13083262 GATAT--TTT---A---T
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   1257 10 +      3484 GCTAT--T-----TT-AT
i Indri_indri.k141_2197838                              I 2 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              12568  9 +     17520 CTATT--T-----T--AT
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8577156  8 +  11848649 GCTAT--G-----T---T
i Jaculus_jaculus.JH725517.1                            C 0 I 2
s Lagothrix_lagothricha.k141_12968                          53765 10 -    147782 GCTAT--T-----TT-AT
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lemur_catta.scaffold_1                                258411131 10 - 285822530 GCTAT--T-----TT-AT
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        28434 10 +     39228 GCTAT--T-----TT-AT
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            57798 10 +     63517 GCTAT--T-----TT-AT
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        36178 10 -     38897 GCTAT--T-----TT-AT
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      2224 10 -     13103 GCTAT--T-----TT-AT
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3091174  7 -   3498232 acTAC--T-----T----
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    18679  6 +     22452 act----t-----a---t
i Lepus_americanus.LepAme_scaffold_62849                C 0 I 372
s Lipotes_vexillifer.KE558548.1                            139502  9 +   3060487 CTATT--T-----T--AT
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19252200 10 +  19376315 GCTAT--T-----TT-AT
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           14991 10 +     84689 ACCAT--T-----TT-AT
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3782730 10 +   6799190 ACCAT--T-----TT-AT
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20598518  9 -  62548349 ctgtt--t-----c--aT
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11094942  7 +  39895028 ACTAC--T-----T----
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             23951 10 +     74745 GCTAT--T-----TT-AT
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12710412 10 +  12821369 GCTAT--T-----TT-AT
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                2986 10 -     26467 GCTAT--T-----TT-AT
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           50857 10 +     63263 GCTAT--T-----TT-AT
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 2967 10 -     26361 GCTAT--T-----TT-AT
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 6157 10 -      7381 GCTAT--T-----TT-AT
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  49386 10 -     79256 GCTAT--T-----TT-AT
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196039484 10 + 196197964 GCTAT--T-----TT-AT
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11449654 10 +  11645122 GCTAT--T-----TT-AT
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   8340 10 -     46448 GCTAT--T-----TT-AT
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                6002 10 -     13212 GCTAT--T-----TT-AT
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 19683 10 -     55006 GCTAT--T-----TT-AT
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43844798 10 +  43892939 GCTAT--T-----TT-AT
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               20966 10 -     24607 GCTAT--T-----TT-AT
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               8337 10 -     27140 GCTAT--T-----TT-AT
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43441373 10 -  43563597 GCTAT--T-----TT-AT
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4454177 10 -   4543643 GCTAT--T-----TT-AT
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            149382  9 +    252755 ctatt--t-----t--at
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             39528  9 +     58827 ctatt--t-----t--at
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36877970 10 +  64221397 GATAT--TTT---A---T
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       65167  9 -    234502 TTATT--T-----T--AT
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             6093  7 -     87323 ACTAC--T-----T----
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                  995  8 +    115071 GTTCT--C-----T---T
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 I 2
s Mesocricetus_auratus.KB708139.1                         1051260 10 -  26018355 GTTTTTGT-----T---A
i Mesocricetus_auratus.KB708139.1                       C 0 I 2
s Mesoplodon_bidens.MesBid_scaffold_96348                    2157  9 -     12939 CAACT--T-----T--AT
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16514194 10 +  47401472 gcTAT--T-----TT-AT
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  41223  9 -     48017 ATGTA--A-----C--AT
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22823949  8 -  98408828 gcttt--t-----t---a
i Microtus_ochrogaster.CM001673.1                       I 8 I 2
s Miopithecus_ogouensis.k141_2935907                         5919 10 +     29742 GCTAT--T-----TT-AT
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        16670  7 -    104932 ACTAC--T-----T----
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     4876 10 -     12809 GCTAT--T-----TT-AT
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 149949  9 +    154973 CTATT--T-----T--AT
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  5952  9 -     19904 CTATT--T-----T--AT
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  150075  7 -    168139 ATTAC--T-----T----
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Mus_caroli.LT608236.1                                  70771566  8 +  92629107 atcat--t-----a---t
i Mus_caroli.LT608236.1                                 C 0 I 2
s Mus_musculus.chr16                                     75493619  8 +  98207768 atcat--G-----A---T
i Mus_musculus.chr16                                    C 0 I 2
s Mus_pahari.LT608305.1                                  67559996  8 +  89017189 atcAT--T-----A---T
i Mus_pahari.LT608305.1                                 C 0 I 2
s Mus_spretus.CM004110.1                                 74336346  8 +  97876770 atcat--g-----A---T
i Mus_spretus.CM004110.1                                C 0 I 2
s Muscardinus_avellanarius.MusAve_scaffold_9643             14631  6 +     98495 actat--t----------
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 I 1
s Mustela_putorius.JH417978.1                             4427938  7 -  28371801 acTAC--T-----T----
i Mustela_putorius.JH417978.1                           C 0 C 0
s Nannospalax_galili.KL201303.1                            120102  7 +    362372 gc-at--t-----t---t
i Nannospalax_galili.KL201303.1                         C 0 I 2
s Neomonachus_schauinslandi.NINY01007774.1                4490069  7 -  14209539 attAC--T-----T----
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3954540  9 -   4490290 ctatt--t-----t--aT
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Nomascus_annamensis.k141_1817463                            608 10 -      1070 GTTAT--T-----TT-AT
i Nomascus_annamensis.k141_1817463                      C 0 C 0
s Nomascus_concolor.k141_70405                                608 10 +      1153 GCTAT--T-----TT-AT
i Nomascus_concolor.k141_70405                          C 0 C 0
s Nomascus_gabriellae.k141_1400361                            538 10 -      2203 GCTAT--T-----TT-AT
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_2374                            2227 10 +      8673 GCTAT--T-----TT-AT
i Nomascus_siki_b.tarseq_2374                       I 89 I 269
s Nomascus_siki_a.k141_421408                                   452 10 +     16235 GTTAT--T-----TT-AT
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                37807  7 +   3668941 aCTAC--T-----T----
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65571560 10 -  95554990 ACCAT--T-----TT-AT
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_771591                            14969 10 +     16181 ACCAT--T-----TT-AT
i Nycticebus_coucang.k141_771591                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65679771 10 +  89412551 accaa--t-----tT-AT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4998978  6 -  23139505 tct----g-----c---t
i Ochotona_princeps.JH802095.1                          C 0 I 351
s Odobenus_rosmarus.KB229369.1                             684771  7 -   3126709 acTAC--T-----T----
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1083384  9 +   1425656 ctatt--t-----t--aT
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         41467  9 +     78940 ctatt--t-----t--AT
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  130140  8 +    145789 GCTTT--T-----A---A
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 I 2
s Onychomys_torridus.OnyTor_scaffold_12578                  42831  8 +     62360 GCTTT--T-----T---A
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 I 2
s Orcinus_orca.KB316965.1                                 7228216  9 -   7562323 ctatt--t-----t--aT
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              63997  9 -     66828 CTGTT--T-----T--AT
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141881697  6 + 163896628 act----t-----g---t
i Oryctolagus_cuniculus.CM000803.1                      C 0 I 372
s Otocyon_megalotis.JAEUCK010005121.1                      314945  7 -    505867 acTAC--C-----T----
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        4909 10 -     53940 ACCAT--T-----TT-AT
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18012882 10 -  38779656 accat--t-----tt-at
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134082396  9 - 275406953 ctaTT--T-----T--AT
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      83624  9 +    140051 CTATT--T-----T--AT
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127578282 10 - 205426864 GCTAT--T-----TT-AT
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120155442 10 - 196562556 GCTAT--T-----TT-AT
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  39673  7 +    295523 ACTAC--T-----T----
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3643488  7 +  18214204 ACTAC--T-----T----
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5033136  7 -   6340057 ACTAC--T-----T----
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1071265  9 -   1292953 cTATT--T-----T--AT
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188160162 10 - 188283584 GCTAT--T-----TT-AT
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              3252 10 +     25005 GCTAT--T-----TT-AT
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47517534 10 +  47705337 GCTAT--T-----TT-AT
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 71525 10 -    104429 GCTAT--T-----TT-AT
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   10057 10 +     14967 GCTAT--T-----TT-AT
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 5922 10 -      7628 GCTAT--T-----TT-AT
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    121171  7 -    135482 ACTAC--T-----T----
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          10579 10 -     23713 ACCAT--T-----TT-AT
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           11719 10 +     61070 ACCAT--T-----TT-AT
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       2001 10 +     49596 TCTATTTT-----G---T
i Perognathus_longimembris.PerPac_flattened_line_19359  I 5 C 0
s Peromyscus_maniculatus.KI615518.1                       4955197  8 -   8017169 gcttt--t-----t---a
i Peromyscus_maniculatus.KI615518.1                     C 0 I 2
s Petromus_typicus.PetTyp_scaffold_33007                    17053 10 -     36578 TCTATGCT-----G---C
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              2681  9 +      8220 CTATT--T-----T--AT
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           9152  9 +     21690 CTATT--T-----T--AT
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       25857 10 +     44506 GCTAT--T-----TT-AT
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        26070 10 +     67491 GCTAT--T-----TT-AT
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      16309 10 -     98129 GCTAT--T-----TT-AT
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     25910 10 +    147771 GCTAT--T-----TT-AT
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         2545 10 -     43940 GCTAT--T-----TT-AT
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          6628 10 -     55515 GCTAT--T-----TT-AT
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         25982 10 +    152463 GCTAT--T-----TT-AT
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       3790 10 -    119457 GCTAT--T-----TT-AT
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         15705 10 +    134592 GCTAT--T-----TT-AT
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          26292 10 -     75465 GCTAT--T-----TT-AT
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              190905 10 -    373494 GCTAT--T-----TT-AT
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19811552 10 +  19899266 GCTAT--T-----TT-AT
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                3699  9 -      9567 TCATT--T-----T--AT
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6852505 10 +  12164890 gcTAT--T-----TT-AT
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     21534 10 -     30946 gctat--t-----tt-at
i Propithecus_coquerelli.NW_012147863.1                 I 2 C 0
s Propithecus_coronatus.k141_1353159                         7590 10 +     11805 GCTAT--T-----TT-AT
i Propithecus_coronatus.k141_1353159                    I 2 C 0
s Propithecus_diadema.k141_577245                           46938 10 +     52369 GCTAT--T-----TT-AT
i Propithecus_diadema.k141_577245                       I 2 C 0
s Propithecus_edwardsi.k141_1317105                         39325 10 -     44753 GCTAT--T-----TT-AT
i Propithecus_edwardsi.k141_1317105                     I 2 C 0
s Propithecus_perrieri.k141_7554                            21248 10 +     27322 GCTAT--T-----TT-AT
i Propithecus_perrieri.k141_7554                        I 2 C 0
s Propithecus_tattersalli.k141_907138                       20882 10 -     53241 GCTAT--T-----TT-AT
i Propithecus_tattersalli.k141_907138                   I 2 C 0
s Propithecus_verreauxi.k141_158021                         43146 10 -     48185 GCTAT--T-----TT-AT
i Propithecus_verreauxi.k141_158021                     I 2 C 0
s Psammomys_obesus.NESX01026517.1                           37992  8 +     77221 gctct--c-----t---t
i Psammomys_obesus.NESX01026517.1                       C 0 I 2
s Pteronura_brasiliensis.PteBra_flattened_line_1343        250061  7 -    344369 ACTAC--T-----T----
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Puma_concolor.QAVW01000427.1                          131539784  7 - 161321710 ACTAC--C-----T----
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                20248  9 +     68503 CTATT--T-----T--AT
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13917398  8 +  90463843 ACTAT--T-----T---T
i Rattus_norvegicus.chr11                               C 0 I 2
s Rhinolophus_sinicus.LVEH01000179.1                      1792359  9 +   2252614 gtatt--t-----t--at
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_1069354                      248  9 -       709 ttatt--t-----t--at
i Saiga_tatarica.SaiTat_scaffold_1069354                C 0 N 0
s Saimiri_boliviensis.NW_024100938.1                     15676314 10 -  43202129 gctat--t-----tt-at
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        8227 10 +     34089 GCTAT--T-----TT-AT
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              8167 10 -     60842 GCTAT--T-----TT-AT
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              8261 10 +     67014 GCTAT--T-----TT-AT
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              8238 10 +     60816 GCTAT--T-----TT-AT
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 8175 10 -     76454 GCTAT--T-----TT-AT
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17344962 10 -  30362882 GCTAT--T-----TT-AT
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         24283 10 -     62485 GCTAT--T-----TT-AT
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   39392  7 -    114521 AT--T--T-----T--AT
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  104760  8 -    120886 GCTTT--T-----T---A
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 I 2
s Solenodon_paradoxus.SolPar_flattened_line_1012            23317  9 +    739146 ACTAT--T-----T--AA
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17769776 14 -  27805282 AGAAT--TTTATCT--AA
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2243806 10 +   2842873 GATAT--TTT---A---T
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             238580  7 -    276980 ACTAC--T-----T----
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            32991  7 +     62062 ATTAC--T-----T----
i Suricata_suricatta.SurSur_flattened_line_20339        I 246 C 0
s Sus_scrofa.CM000824.4                                 189274758  8 + 218635234 -TATT--T-----T--AC
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        18575 10 -  13920577 GCTAT--T-----TT-AT
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      810542 10 +   1148477 GCTAT--TT----T--AT
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  61184 10 +     99546 GCTAT--TT----T--AT
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               31129 10 +     42269 GCTAT--T-----TC-AT
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               64438 10 +     65473 GCTAT--T-----TC-AT
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194011695 10 - 194193292 GCTAT--T-----TT-AT
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   9280  9 +     90398 CTATT--T-----T--AT
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16089592  9 +  31416278 ttgtt--t-----t--at
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2797517  5 -   3938065 -------t-----ga-tT
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    9446  5 +     13056 -------T-----TA-TT
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69316945  9 -  96451834 ctatt--t-----t--aT
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   9918  7 +     10241 AT--T--T-----T--AT
i Uropsilus_gracilis.UroGra_scaffold_69449              I 1 C 0
s Ursus_maritimus.KK498671.1                              6520245  7 +  28682327 acTAC--T-----T----
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  9147 10 -     20643 GCTAT--T-----TT-AT
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             28682 10 -     33872 GCTAT--T-----TT-AT
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1527978  9 -   2331223 cTATT--T-----T--AT
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                144172  7 -    281493 ACTAC--C-----T----
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       131303 10 -    134049 GCTAT--TT-A--T---T
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        219627  7 -    227762 ACTAC--T-----T----
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_256618                      242  8 -      2259 GCTAT--T-----T---T
i Zapus_hudsonius.ZapHud_scaffold_256618                C 0 I 2
s Ziphius_cavirostris.ZipCav_flattened_line_60625            1689  9 -     13665 ctatt--t-----t--aT
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Eptesicus_fuscus.JH977687.1                             4708429 237 +   6522550 I
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Dinomys_branickii.DinBra_scaffold_1996                   158442 1030 +    228994 I
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           4051 456 -      6963 I
e Tonatia_saurophila.TonSau_scaffold_3334                  137563 275 -    259118 I
e Tamandua_tetradactyla.TamTet_scaffold_26877               16259 379 +     45698 I
e Tadarida_brasiliensis.TadBra_scaffold_61492                1822 242 +     20549 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Pteronotus_parnellii.KE867983.1                            5588 252 -     27784 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             6589 379 -      8794 I
e Myotis_myotis.MyoMyo_scaffold_6123                        13515 236 +     66751 I
e Myotis_lucifugus.GL429887.1                             3468272 238 -   3747815 I
e Myotis_davidii.KB114863.1                               5022194 233 +   6462685 I
e Myotis_brandtii.KE161952.1                               970769 237 +   8389877 I
e Murina_feae.MurFea_scaffold_2254                          23900 236 -    100666 I
e Mormoops_blainvillei.MorMeg_scaffold_2952                162937 259 +    265003 I
e Miniopterus_schreibersii.MinSch_scaffold_24116            36998 214 +     45743 I
e Miniopterus_natalensis.LDJU01000022.1                   8212509 213 +  10048721 I
e Micronycteris_hirsuta.MicHir_scaffold_37978               24387 274 -     32043 I
e Lasiurus_borealis.LasBor_scaffold_59542                    5042 241 +     26176 I
e Kogia_breviceps.KogBre_flattened_line_35920               27132 184 +     37189 I
e Elephantulus_edwardii.JH947210.1                        7830035 1277 +  15467074 I
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Echinops_telfairi.JH980316.1                           22999931  2 -  44670279 I
e Desmodus_rotundus.KZ672188.1                           18700517 262 -  18957592 I
e Dasypus_novemcinctus.JH568778.1                          185121 383 -   6883506 I
e Choloepus_hoffmanni.KN194586.1                           763329 503 +    964067 I
e Choloepus_didactylus.ChoDid_scaffold_36182                18024 504 -     21363 I
e Carollia_perspicillata.CarPer_scaffold_4436               61226 261 +     67245 I
e Artibeus_jamaicensis.ArtJam_scaffold_41619                10440 261 -     29036 I
e Anoura_caudifer.AnoCau_scaffold_422                      392020 257 -    631301 I
e Trachypithecus_pileatus.k141_1022309                       5226  0 +     13828 C
e Trachypithecus_phayrei.ctg3                            44662914  0 -  44834318 C
e Trachypithecus_obscurus.k141_1115109                       8130  0 -     28054 C
e Trachypithecus_melamera.k141_699241                        2986  0 -     24393 C
e Trachypithecus_leucocephalus.k141_381681                   3005  0 +     12481 C
e Trachypithecus_laotum.k141_760702                          4719  0 +     14371 C
e Trachypithecus_hatinhensis.k141_504423                     6067  0 -     15592 C
e Trachypithecus_germaini.k141_868450                        3883  0 -     11566 C
e Trachypithecus_geei.k141_670367                           46082  0 -     54611 C
e Trachypithecus_francoisi.k141_768164                       4689  0 -     14244 C
e Trachypithecus_cristatus.k141_1011511                      5261  0 -     12939 C
e Trachypithecus_crepusculus.k141_1588528                   23360  0 -     32910 C
e Trachypithecus_auratus.k141_738098                        29800  0 +     38948 C
e Semnopithecus_vetulus.k141_1143185                        16479  0 +     30600 C
e Semnopithecus_schistaceus.k141_387461                     33457  0 +     42640 C
e Semnopithecus_priam.k141_410937                           40312  0 +     46263 C
e Semnopithecus_johnii.k141_785014                         121532  0 +    130994 C
e Semnopithecus_hypoleucos.k141_761524                      11528  0 +     20762 C
e Semnopithecus_entellus.k141_1572367                        6153  0 +     15331 C
e Rhinopithecus_strykeri.ctg4                            44859307  0 -  45163003 C
e Rhinopithecus_bieti.k119_554384                            2917  0 -     17045 C
e Pygathrix_nigripes_a.k141_101123                             8537  0 +     18040 C
e Pygathrix_nigripes_b.ctg79                                 6809148  0 +   6970761 C
e Pygathrix_cinerea.k141_374971                             32651  0 +     56732 C
e Presbytis_mitrata.k141_860013                              8661  0 +     14865 C
e Presbytis_comata.k141_672698                               8546  0 -     15069 C
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000036.1               26743271  0 +  26888534 C
e Piliocolobus_kirkii.k141_929665                            4788  0 +      7694 C
e Piliocolobus_gordonorum.k141_1270531                       5421  0 -     17985 C
e Piliocolobus_badius.k141_1987485                           4802  0 -      5908 C
e Octodon_degus.JH651621.1                                3687420 1881 +  10294119 I
e Nasalis_larvatus.k141_153429                              11264  0 +     48152 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     91920 1922 -    117718 I
e Hystrix_cristata.HysCri_scaffold_50788                     7688 1865 +     22540 I
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 32592 1717 -     67205 I
e Colobus_polykomos.k141_1406057                            19335  0 +     23629 C
e Colobus_guereza.LG08                                  147667351  0 + 156195979 C
e Colobus_angolensis.KN985967.1                          10889423  0 +  10971483 C
e Chinchilla_lanigera.JH721867.1                         15963245 964 +  43084221 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               17309  2 +    209709 C---------T
s Acinonyx_jubatus.LLWD01000356.1                         2039266  1 +   3721120 ----------T
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    117512  2 -    189883 C---------T
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 2 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10662958  1 +  23371972 ----------T
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7099746  1 -  16596857 ----------T
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   5181  2 -     60446 C---------T
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         5898  2 -     29318 C---------T
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         4836  2 +     38766 C---------T
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          5792  2 -     80423 C---------T
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                               764  2 +     19852 C---------T
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                3020  2 -     12443 C---------T
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                              319  2 +      5070 C---------T
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                   64  2 -      1641 C---------T
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          2803  2 -     24210 C---------T
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           29385  2 -     30219 C---------T
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_405616                              5221  2 +     16794 C---------T
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                             353  2 -      1470 C---------T
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             4498  2 -      9835 C---------T
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3525265  2 +   4113121 C---------T
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             2696  2 +     55446 C---------T
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 66111  2 +     78111 C---------T
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            9057  2 +     22701 C---------T
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5753015  2 +   9889416 c---------t
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             9613  2 -    104377 C---------T
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               9620  2 +     23246 C---------T
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     2132  2 +     11424 C---------T
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        6218  2 +      9265 C---------T
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9542906  2 +  39197703 C---------T
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             64179  2 +     85812 C---------T
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                15192  2 +     89302 C---------T
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             19693  2 -     58268 C---------T
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             67687  2 +    119057 C---------T
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               9656  2 -     25888 C---------T
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                10695  2 -     16375 C---------T
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               4311  2 +      6337 C---------T
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26383740  2 +  51448160 C---------T
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        8913  2 -     13118 C---------T
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   47727  2 -     72089 C---------T
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   301871  2 -   6870073 C---------T
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22955969  2 + 161108492 C---------T
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     418234  2 +    998990 C---------T
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22664623  2 + 158972876 C---------T
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               674386  2 +   1914593 C---------T
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               117558  2 -    171031 C---------T
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 16578  2 +    125063 C---------T
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                18625  2 -    216513 C---------T
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       11168  2 -    134917 C---------T
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3222877  2 -   8989139 C---------T
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           400579  2 -  15254737 C---------T
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2976315  2 +   6889770 C---------T
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11526099  1 +  39901454 ----------T
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   21073  1 +     87036 ----------T
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11272782  1 -  35597290 ----------T
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11095493  1 +  39895921 ----------T
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16462278  1 -  44759192 ----------T
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21330345  2 + 157394656 C---------T
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135711562  2 - 157403528 C---------T
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          313282  2 +    345090 C---------T
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   162412  2 -    276539 C---------T
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15789418  2 -  24422027 N---------N
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15801357  2 -  24440124 t---------T
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       179529  2 +    436027 T---------T
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18894391  2 -  29618158 C---------T
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                11935  2 -     26817 C---------T
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                16179  2 +     25043 C---------T
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                        12286  2 +     21754 C---------T
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4367315  2 +   7569818 C---------T
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         7072  2 -      9338 C---------T
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6559122  2 +   6739814 C---------T
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      30599  2 +     60454 C---------T
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          5803  2 -     21101 C---------T
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         63113  2 -    107033 C---------T
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        5976  2 -     17608 C---------T
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          3141  2 +     45019 C---------T
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           3201  2 +     15177 C---------T
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          6023  2 +     16677 C---------T
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           28213  2 +     35983 C---------T
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11994744  2 +  12117833 C---------T
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46481505  2 +  46592721 C---------T
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      45054  2 -     45581 C---------T
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       6037  2 +     35577 C---------T
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        5831  2 -     25661 C---------T
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        5788  2 -     17744 C---------T
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        25372  2 +     37128 C---------T
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           62922  2 -     68416 C---------T
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                           12023  2 +     13308 C---------T
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             9218  2 -     18223 C---------T
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                               957  2 +    188999 C---------T
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           45255  2 +     57117 C---------T
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          49935  2 +     54541 C---------T
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chiropotes_israelita.k141_1189915                         74737  2 +    196370 C---------T
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          18918  2 +     40510 C---------T
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15143557  2 -  15256731 C---------T
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      38021  2 -     53260 C---------T
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101148580  2 + 101219884 C---------T
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_629495              1970  1 -      3120 C----------
i Chrysochloris_asiatica.ChrAsi_scaffold_629495         C 0 I 9
s Condylura_cristata.JH655880.1                          60621937  2 +  78930452 C---------C
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         1954  2 -      5782 c---------t
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 282384  2 -    399297 C---------T
i Cricetomys_gambianus.CriGam_scaffold_949              I 2 C 0
s Cricetulus_griseus.LT883672.1                          53034749  2 +  72327488 c---------T
i Cricetulus_griseus.LT883672.1                         I 2 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              1362  2 -     22648 A---------T
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 I 7
s Cryptoprocta_ferox.CryFer_flattened_line_19014            57260  1 -     70449 ----------T
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  213739  2 -    956709 T---------T
i Ctenodactylus_gundi.CteGun_scaffold_447               I 1 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                20590  2 +     26546 T---------T
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             61728  2 -    236241 T---------T
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16848852  2 +  31942871 C---------T
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80040365  2 -  96802777 C---------T
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 325962  2 +    993696 C---------T
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   6603  2 +    151128 C---------T
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dipodomys_ordii.KN672545.1                              3659920  2 +   4240102 C---------C
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  2268  2 -     11986 C---------C
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                39697  2 -     73477 T---------T
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1495943  2 +   1727528 C---------T
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        243550  2 -    369425 c---------T
i Ellobius_lutescens.LOEQ01003611.1                     I 2 C 0
s Ellobius_talpinus.LOJH01198462.1                           1292  2 -      1901 C---------T
i Ellobius_talpinus.LOJH01198462.1                      I 2 C 0
s Enhydra_lutris.KZ291749.1                              85877217  1 +  99434291 ----------T
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Equus_asinus.JREZ01000062.1                             5856328  2 -   7175178 C---------T
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13354828  2 +  41866177 C---------T
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          16318  2 +     92910 C---------T
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11540781  2 +  16010500 C---------T
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48780590  2 -  48907691 C---------T
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          318583  2 +    330699 C---------T
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             65040  2 +     89355 C---------T
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              9005  2 +     13586 C---------T
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_1015201                              2268  2 -      4292 C---------T
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            15401  2 +     36558 C---------T
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            11726  2 +     60246 C---------T
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                15209  2 +    109717 C---------T
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 3194  2 -     19505 C---------T
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                19866  2 +     27497 C---------T
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           22322  2 +     26808 C---------T
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                37057  2 +     46535 C---------T
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              19796  2 -     29447 C---------T
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.AANG03133801.1                                  312  1 -       736 ----------T
i Felis_catus.AANG03133801.1                            C 0 C 0
s Felis_catus_fca126.CM031420.1                         129285661  1 - 158578461 ----------T
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 26760  1 +     52776 ----------T
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13895873  2 -  19261668 T---------T
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     215059  2 -    847004 C---------T
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           17420  2 -     43889 C---------T
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          14563  2 +     27357 C---------T
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               159303  2 +    324696 C---------T
i Galeopterus_variegatus.GalVar_scaffold_354            I 1 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    185741  2 -    189561 C---------T
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           16197  2 -     18683 T---------A
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               9013  2 -     14630 C---------T
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119656113  2 - 195582420 C---------T
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   79542  2 +    118900 T---------C
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         5789  2 +     10286 C---------T
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             4267  2 -     11661 C---------T
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             9594  2 +     56096 C---------T
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        32843  2 -     42470 C---------T
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        49469  2 -     54384 C---------T
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              22401  1 +     53719 ----------T
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                32615  2 -     91191 C---------T
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2560390  2 +  31725842 T---------T
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               62602  2 +     73687 C---------T
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              150363  2 +    277961 C---------T
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      282768  2 -    477199 c---------T
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959                537  2 +     26078 C---------T
i Hipposideros_galeritus.HipGal_scaffold_52959          C 0 C 0
s Hoolock_leuconedys.ctg315                                   350011  2 +    431944 C---------T
i Hoolock_leuconedys.ctg315                                C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 22997  1 -     67322 ----------T
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           20985  2 -    119109 T---------T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_1816750                             1492  2 +      3202 C---------T
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1633646                              1462  2 -      2102 C---------T
i Hylobates_agilis.k141_1633646                         C 0 C 0
s Hylobates_klossii.k141_468230                              2979  2 +      5464 C---------T
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14628327  2 -  25970782 C---------T
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                             878  2 +      4161 C---------T
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             36435  2 -     60944 C---------T
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7130111  2 +  13083262 C---------C
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   1267  2 +      3484 C---------A
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              12577  2 +     17520 C---------T
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8577166  2 +  11848649 C---------T
i Jaculus_jaculus.JH725517.1                            I 2 C 0
s Lagothrix_lagothricha.k141_12968                          53775  2 -    147782 C---------T
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lemur_catta.scaffold_1                                258411141  2 - 285822530 C---------T
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        28444  2 +     39228 C---------T
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            57808  2 +     63517 C---------T
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        36188  2 -     38897 C---------T
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      2234  2 -     13103 C---------T
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3091181  1 -   3498232 ----------T
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    19057 11 +     22452 TTCTTGAGCCT
i Lepus_americanus.LepAme_scaffold_62849                I 372 C 0
s Lipotes_vexillifer.KE558548.1                            139511  2 +   3060487 C---------T
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19252210  2 +  19376315 C---------T
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           15001  8 +     84689 TAAT--ATC-T
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3782740  8 +   6799190 TAAT--ATC-T
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20598527  2 -  62548349 C---------G
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11094949  1 +  39895028 ----------T
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             23961  2 +     74745 C---------T
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12710422  2 +  12821369 C---------T
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                2996  2 -     26467 C---------T
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           50867  2 +     63263 C---------T
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 2977  2 -     26361 C---------T
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 6167  2 -      7381 C---------T
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  49396  2 -     79256 C---------T
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196039494  2 + 196197964 C---------T
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11449664  2 +  11645122 C---------T
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   8350  2 -     46448 C---------T
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                6012  2 -     13212 C---------T
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 19693  2 -     55006 C---------T
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43844808  2 +  43892939 C---------T
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               20976  2 -     24607 C---------T
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               8347  2 -     27140 C---------T
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43441383  2 -  43563597 C---------T
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4454187  2 -   4543643 C---------T
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            149391  2 +    252755 c---------T
i Manis_javanica.JSZB01003966.1                         C 0 I 2557
s Manis_pentadactyla.KN017078.1                             39537  2 +     58827 c---------t
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36877980  2 +  64221397 C---------C
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       65176  2 -    234502 C---------T
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             6100  1 -     87323 ----------T
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 1005  2 +    115071 C---------T
i Meriones_unguiculatus.MerUng_scaffold_9483            I 2 C 0
s Mesocricetus_auratus.KB708139.1                         1051272  2 -  26018355 C---------T
i Mesocricetus_auratus.KB708139.1                       I 2 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    2166  2 -     12939 C---------T
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16514204  2 +  47401472 C---------T
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  41232  2 -     48017 C---------C
i Microgale_talazaci.MicTal_scaffold_34660              C 0 I 3
s Microtus_ochrogaster.CM001673.1                        22823959  2 -  98408828 c---------A
i Microtus_ochrogaster.CM001673.1                       I 2 C 0
s Miopithecus_ogouensis.k141_2935907                         5929  2 +     29742 C---------T
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        16677  1 -    104932 ----------T
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     4886  2 -     12809 C---------T
i Mirza_zaza.k141_593947                                C 0 I 10
s Monodon_monoceros.MonMon_M_scaffold_5598                 149958  2 +    154973 C---------T
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  5961  2 -     19904 C---------T
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  150082  1 -    168139 ----------T
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Mus_caroli.LT608236.1                                  70771576  2 +  92629107 C---------C
i Mus_caroli.LT608236.1                                 I 2 C 0
s Mus_musculus.chr16                                     75493629  2 +  98207768 C---------C
i Mus_musculus.chr16                                    I 2 C 0
s Mus_pahari.LT608305.1                                  67560006  2 +  89017189 C---------C
i Mus_pahari.LT608305.1                                 I 2 C 0
s Mus_spretus.CM004110.1                                 74336356  2 +  97876770 C---------C
i Mus_spretus.CM004110.1                                I 2 C 0
s Mustela_putorius.JH417978.1                             4427945  1 -  28371801 ----------T
i Mustela_putorius.JH417978.1                           C 0 C 0
s Nannospalax_galili.KL201303.1                            120111  2 +    362372 a---------t
i Nannospalax_galili.KL201303.1                         I 2 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4490076  1 -  14209539 ----------T
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3954549  2 -   4490290 C---------T
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Nomascus_annamensis.k141_1817463                            618  2 -      1070 C---------T
i Nomascus_annamensis.k141_1817463                      C 0 C 0
s Nomascus_concolor.k141_70405                                618  2 +      1153 C---------T
i Nomascus_concolor.k141_70405                          C 0 C 0
s Nomascus_gabriellae.k141_1400361                            548  2 -      2203 C---------T
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_1022                             572  2 -     11638 C---------T
i Nomascus_siki_b.tarseq_1022                       I 10 C 0
s Nomascus_siki_a.k141_421408                                   462  2 +     16235 C---------T
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                37814  1 +   3668941 ----------T
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65571570  2 -  95554990 C---------T
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_771591                            14979  2 +     16181 C---------T
i Nycticebus_coucang.k141_771591                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65679781  2 +  89412551 C---------T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            4999335 11 -  23139505 TTCTTCAACCT
i Ochotona_princeps.JH802095.1                          I 351 C 0
s Odobenus_rosmarus.KB229369.1                             684778  1 -   3126709 ----------T
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1083393  2 +   1425656 C---------T
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         41476  2 +     78940 C---------T
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  130150  2 +    145789 C---------T
i Ondatra_zibethicus.OndZib_scaffold_6821               I 2 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  42841  2 +     62360 C---------C
i Onychomys_torridus.OnyTor_scaffold_12578              I 2 C 0
s Orcinus_orca.KB316965.1                                 7228225  2 -   7562323 C---------T
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              64006  2 -     66828 C---------C
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141882075 11 + 163896628 TTCTTGATCCT
i Oryctolagus_cuniculus.CM000803.1                      I 372 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      314952  1 -    505867 ----------T
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        4919  2 -     53940 G---------T
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18012892  2 -  38779656 G---------T
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134082405  2 - 275406953 C---------T
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      83633  2 +    140051 C---------T
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127578292  2 - 205426864 C---------T
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120155452  2 - 196562556 C---------T
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  39680  1 +    295523 ----------T
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3643495  1 +  18214204 ----------T
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5033143  1 -   6340057 ----------T
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1071274  2 -   1292953 C---------T
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188160172  2 - 188283584 C---------T
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              3262  2 +     25005 C---------T
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47517544  2 +  47705337 C---------T
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 71535  2 -    104429 C---------T
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   10067  2 +     14967 C---------T
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 5932  2 -      7628 C---------T
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    121178  1 -    135482 ----------T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          10589  2 -     23713 C---------T
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           11729  2 +     61070 C---------T
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       2011  2 +     49596 C---------C
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4955207  2 -   8017169 c---------T
i Peromyscus_maniculatus.KI615518.1                     I 2 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    17063  2 -     36578 T---------C
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              2690  2 +      8220 C---------T
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           9161  2 +     21690 A---------T
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       25867  2 +     44506 C---------T
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        26080  2 +     67491 C---------T
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      16319  2 -     98129 C---------T
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     25920  2 +    147771 C---------T
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         2555  2 -     43940 C---------T
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          6638  2 -     55515 C---------T
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         25992  2 +    152463 C---------T
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       3800  2 -    119457 C---------T
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         15715  2 +    134592 C---------T
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          26302  2 -     75465 C---------T
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              190915  2 -    373494 C---------T
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19811562  2 +  19899266 C---------T
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                3708  2 -      9567 C---------T
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6852515  2 +  12164890 C---------T
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     21544  2 -     30946 c---------t
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         7600  2 +     11805 C---------T
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           46948  2 +     52369 C---------T
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         39335  2 -     44753 C---------T
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            21258  2 +     27322 C---------T
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       20892  2 -     53241 C---------T
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         43156  2 -     48185 C---------T
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           38002  2 +     77221 C---------T
i Psammomys_obesus.NESX01026517.1                       I 2 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        250068  1 -    344369 ----------T
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Puma_concolor.QAVW01000427.1                          131539791  1 - 161321710 ----------T
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                20257  2 +     68503 C---------T
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13917408  2 +  90463843 C---------C
i Rattus_norvegicus.chr11                               I 2 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1792368  2 +   2252614 c---------t
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                       667  2 -      4338 C---------T
i Saiga_tatarica.SaiTat_scaffold_371890                 N 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15676324  2 -  43202129 c---------t
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        8237  2 +     34089 C---------T
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              8177  2 -     60842 C---------T
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              8271  2 +     67014 C---------T
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              8248  2 +     60816 C---------T
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 8185  2 -     76454 C---------T
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17344972  2 -  30362882 C---------T
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         24293  2 -     62485 C---------T
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   39399  2 -    114521 C---------A
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  104770  2 -    120886 C---------T
i Sigmodon_hispidus.SigHis_scaffold_11332               I 2 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            23326  2 +    739146 T---------G
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17769790  2 -  27805282 G---------T
i Sorex_araneus.JH798170.1                              C 0 I 7
s Spermophilus_dauricus.KZ294190.1                        2243816  2 +   2842873 C---------C
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             238587  1 -    276980 ----------T
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            32998  1 +     62062 ----------T
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189274766  2 + 218635234 C---------T
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        18585  2 -  13920577 C---------T
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      810552  2 +   1148477 C---------T
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  61194  2 +     99546 C---------T
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               31139  2 +     42269 T---------T
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               64448  2 +     65473 T---------T
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194011705  2 - 194193292 C---------T
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   9289  2 +     90398 C---------T
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16089601  2 +  31416278 C---------T
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2797522  2 -   3938065 C---------T
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    9451  2 +     13056 C---------T
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69316954  2 -  96451834 C---------T
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   9925  2 +     10241 C---------T
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6520252  1 +  28682327 ----------T
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  9157  2 -     20643 C---------T
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             28692  2 -     33872 C---------T
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1527987  2 -   2331223 C---------T
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                144179  1 -    281493 ----------T
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        219634  1 -    227762 ----------T
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       131313  1 -    134049 T----------
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_256618                      252  2 -      2259 C---------T
i Zapus_hudsonius.ZapHud_scaffold_256618                I 2 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            1698  2 -     13665 C---------T
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Eptesicus_fuscus.JH977687.1                             4708429 237 +   6522550 I
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Dinomys_branickii.DinBra_scaffold_1996                   158442 1030 +    228994 I
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           4051 456 -      6963 I
e Tonatia_saurophila.TonSau_scaffold_3334                  137563 275 -    259118 I
e Tamandua_tetradactyla.TamTet_scaffold_26877               16259 379 +     45698 I
e Tadarida_brasiliensis.TadBra_scaffold_61492                1822 242 +     20549 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Pteronotus_parnellii.KE867983.1                            5588 252 -     27784 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             6589 379 -      8794 I
e Myotis_myotis.MyoMyo_scaffold_6123                        13515 236 +     66751 I
e Myotis_lucifugus.GL429887.1                             3468272 238 -   3747815 I
e Myotis_davidii.KB114863.1                               5022194 233 +   6462685 I
e Myotis_brandtii.KE161952.1                               970769 237 +   8389877 I
e Murina_feae.MurFea_scaffold_2254                          23900 236 -    100666 I
e Mormoops_blainvillei.MorMeg_scaffold_2952                162937 259 +    265003 I
e Miniopterus_schreibersii.MinSch_scaffold_24116            36998 214 +     45743 I
e Miniopterus_natalensis.LDJU01000022.1                   8212509 213 +  10048721 I
e Micronycteris_hirsuta.MicHir_scaffold_37978               24387 274 -     32043 I
e Lasiurus_borealis.LasBor_scaffold_59542                    5042 241 +     26176 I
e Kogia_breviceps.KogBre_flattened_line_35920               27132 184 +     37189 I
e Elephantulus_edwardii.JH947210.1                        7830035 1277 +  15467074 I
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Echinops_telfairi.JH980316.1                           22999931  2 -  44670279 I
e Desmodus_rotundus.KZ672188.1                           18700517 262 -  18957592 I
e Dasypus_novemcinctus.JH568778.1                          185121 383 -   6883506 I
e Choloepus_hoffmanni.KN194586.1                           763329 503 +    964067 I
e Choloepus_didactylus.ChoDid_scaffold_36182                18024 504 -     21363 I
e Carollia_perspicillata.CarPer_scaffold_4436               61226 261 +     67245 I
e Artibeus_jamaicensis.ArtJam_scaffold_41619                10440 261 -     29036 I
e Anoura_caudifer.AnoCau_scaffold_422                      392020 257 -    631301 I
e Allactaga_bullata.AllBul_scaffold_70162                   21475  0 -     22067 C
e Trachypithecus_pileatus.k141_1022309                       5226  0 +     13828 C
e Trachypithecus_phayrei.ctg3                            44662914  0 -  44834318 C
e Trachypithecus_obscurus.k141_1115109                       8130  0 -     28054 C
e Trachypithecus_melamera.k141_699241                        2986  0 -     24393 C
e Trachypithecus_leucocephalus.k141_381681                   3005  0 +     12481 C
e Trachypithecus_laotum.k141_760702                          4719  0 +     14371 C
e Trachypithecus_hatinhensis.k141_504423                     6067  0 -     15592 C
e Trachypithecus_germaini.k141_868450                        3883  0 -     11566 C
e Trachypithecus_geei.k141_670367                           46082  0 -     54611 C
e Trachypithecus_francoisi.k141_768164                       4689  0 -     14244 C
e Trachypithecus_cristatus.k141_1011511                      5261  0 -     12939 C
e Trachypithecus_crepusculus.k141_1588528                   23360  0 -     32910 C
e Trachypithecus_auratus.k141_738098                        29800  0 +     38948 C
e Semnopithecus_vetulus.k141_1143185                        16479  0 +     30600 C
e Semnopithecus_schistaceus.k141_387461                     33457  0 +     42640 C
e Semnopithecus_priam.k141_410937                           40312  0 +     46263 C
e Semnopithecus_johnii.k141_785014                         121532  0 +    130994 C
e Semnopithecus_hypoleucos.k141_761524                      11528  0 +     20762 C
e Semnopithecus_entellus.k141_1572367                        6153  0 +     15331 C
e Rhinopithecus_strykeri.ctg4                            44859307  0 -  45163003 C
e Rhinopithecus_bieti.k119_554384                            2917  0 -     17045 C
e Pygathrix_nigripes_a.k141_101123                             8537  0 +     18040 C
e Pygathrix_nigripes_b.ctg79                                 6809148  0 +   6970761 C
e Pygathrix_cinerea.k141_374971                             32651  0 +     56732 C
e Presbytis_mitrata.k141_860013                              8661  0 +     14865 C
e Presbytis_comata.k141_672698                               8546  0 -     15069 C
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000036.1               26743271  0 +  26888534 C
e Piliocolobus_kirkii.k141_929665                            4788  0 +      7694 C
e Piliocolobus_gordonorum.k141_1270531                       5421  0 -     17985 C
e Piliocolobus_badius.k141_1987485                           4802  0 -      5908 C
e Octodon_degus.JH651621.1                                3687420 1881 +  10294119 I
e Nasalis_larvatus.k141_153429                              11264  0 +     48152 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     91920 1922 -    117718 I
e Muscardinus_avellanarius.MusAve_scaffold_9643             14637  1 +     98495 I
e Hystrix_cristata.HysCri_scaffold_50788                     7688 1865 +     22540 I
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 32592 1717 -     67205 I
e Colobus_polykomos.k141_1406057                            19335  0 +     23629 C
e Colobus_guereza.LG08                                  147667351  0 + 156195979 C
e Colobus_angolensis.KN985967.1                          10889423  0 +  10971483 C
e Chinchilla_lanigera.JH721867.1                         15963245 964 +  43084221 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               17311 2 +    209709 AT
s Acinonyx_jubatus.LLWD01000356.1                         2039267 2 +   3721120 AA
i Acinonyx_jubatus.LLWD01000356.1                       C 0 I 10
s Acomys_cahirinus.AcoCah_scaffold_1625                    117514 2 -    189883 AA
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 I 15
s Ailuropoda_melanoleuca.LNAT01000321.1                  10662959 2 +  23371972 AG
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 I 10
s Ailurus_fulgens.LNAC01000003.1                          7099747 2 -  16596857 AA
i Ailurus_fulgens.LNAC01000003.1                        C 0 I 10
s Allactaga_bullata.AllBul_scaffold_70162                   21475 2 -     22067 AG
i Allactaga_bullata.AllBul_scaffold_70162               C 0 I 14
s Allenopithecus_nigroviridis.k141_2469532                   5183 2 -     60446 AT
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         5900 2 -     29318 AT
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         4838 2 +     38766 AT
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          5794 2 -     80423 AT
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                               766 2 +     19852 AT
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                3022 2 -     12443 AT
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                              321 2 +      5070 AT
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                   66 2 -      1641 AT
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          2805 2 -     24210 AT
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           29387 2 -     30219 AT
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_405616                              5223 2 +     16794 AT
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                             355 2 -      1470 AT
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             4500 2 -      9835 AT
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3525267 2 +   4113121 AA
i Ammotragus_lervia.NIVO01013474.1                      C 0 I 10
s Antilocapra_americana.AntAmePen_scaffold_27338             2698 2 +     55446 AA
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 I 10
s Aotus_azarae.k141_3170768                                 66113 2 +     78111 AT
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            9059 2 +     22701 AT
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5753017 2 +   9889416 at
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             9615 2 -    104377 AT
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               9622 2 +     23246 AT
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     2134 2 +     11424 AA
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 I 10
s Arctocebus_calabarensis.k141_587554                        6220 2 +      9265 AA
i Arctocebus_calabarensis.k141_587554                   C 0 I 10
s Ateles_geoffroyi_b.tarseq_2582                             9542908 2 +  39197703 AT
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             64181 2 +     85812 AT
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                15194 2 +     89302 AT
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             19695 2 -     58268 AT
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             67689 2 +    119057 AT
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               9658 2 -     25888 AT
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                10697 2 -     16375 AA
i Avahi_laniger.k141_2840928                            C 0 I 8
s Avahi_peyrierasi.k141_798820                               4313 2 +      6337 AA
i Avahi_peyrierasi.k141_798820                          C 0 I 8
s Balaenoptera_acutorostrata.KI537095.1                  26383742 2 +  51448160 AA
i Balaenoptera_acutorostrata.KI537095.1                 C 0 I 10
s Balaenoptera_bonaerensis.DF502048.1                        8915 2 -     13118 AA
i Balaenoptera_bonaerensis.DF502048.1                   C 0 I 10
s Beatragus_hunteri.BeaHun_scaffold_21644                   47729 2 -     72089 GA
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 I 10
s Bison_bison.KN264915.1                                   301873 2 -   6870073 AA
i Bison_bison.KN264915.1                                C 0 I 10
s Bos_indicus.CM003021.1                                 22955971 2 + 161108492 AA
i Bos_indicus.CM003021.1                                C 0 I 10
s Bos_mutus.JH883513.1                                     418236 2 +    998990 AA
i Bos_mutus.JH883513.1                                  C 0 I 10
s Bos_taurus.CM000177.6                                  22664625 2 + 158972876 AA
i Bos_taurus.CM000177.6                                 C 0 I 10
s Bubalus_bubalis.KI419065.1                               674388 2 +   1914593 AA
i Bubalus_bubalis.KI419065.1                            C 0 I 10
s Cacajao_ayresi.k141_724503                               117560 2 -    171031 AT
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 16580 2 +    125063 AT
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                18627 2 -    216513 AT
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       11170 2 -    134917 AT
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3222879 2 -   8989139 AA
i Camelus_bactrianus.KN276303.1                         C 0 I 10
s Camelus_dromedarius.KN271192.1                           400581 2 -  15254737 AA
i Camelus_dromedarius.KN271192.1                        C 0 I 10
s Camelus_ferus.KB016973.1                                2976317 2 +   6889770 AA
i Camelus_ferus.KB016973.1                              C 0 I 10
s CanFam4.chr31                                          11526100 2 +  39901454 AA
i CanFam4.chr31                                         C 0 I 10
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   21074 2 +     87036 AA
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 I 10
s Canis_lupus_dingo.QKWQ01001993.1                       11272783 2 -  35597290 AA
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 I 10
s Canis_lupus_familiaris.chr31                           11095494 2 +  39895921 AA
i Canis_lupus_familiaris.chr31                          C 0 I 10
s Canis_lupus_orion.HG994411.1                           16462279 2 -  44759192 AA
i Canis_lupus_orion.HG994411.1                          C 0 I 10
s Capra_aegagrus.CM003214.1                              21330347 2 + 157394656 AA
i Capra_aegagrus.CM003214.1                             C 0 I 10
s Capra_hircus.CM004562.1                               135711564 2 - 157403528 AA
i Capra_hircus.CM004562.1                               C 0 I 10
s Carlito_syrichta.NW_007248099.1                          313284 2 +    345090 AT
i Carlito_syrichta.NW_007248099.1                       C 0 I 10
s Catagonus_wagneri.CatWag_scaffold_1305                   162414 2 -    276539 AA
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 I 10
s Cavia_aperea.AVPZ01000278.1                            15789420 2 -  24422027 NN
i Cavia_aperea.AVPZ01000278.1                           C 0 I 10
s Cavia_porcellus.DS562889.1                             15801359 2 -  24440124 GA
i Cavia_porcellus.DS562889.1                            C 0 I 10
s Cavia_tschudii.CavTsc_scaffold_488                       179531 2 +    436027 GA
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 I 10
s Cebus_albifrons.Contig22                               18894393 2 -  29618158 AT
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                11937 2 -     26817 AT
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                16181 2 +     25043 AT
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                        12288 2 +     21754 AT
i Cephalopachus_bancanus.k141_702587                    C 0 I 10
s Ceratotherium_simum.JH767818.1                          4367317 2 +   7569818 AA
i Ceratotherium_simum.JH767818.1                        C 0 I 10
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         7074 2 -      9338 AA
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 I 10
s Cercocebus_atys.KQ010443.1                              6559124 2 +   6739814 AT
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      30601 2 +     60454 AT
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          5805 2 -     21101 AT
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         63115 2 -    107033 AT
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        5978 2 -     17608 AT
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          3143 2 +     45019 AT
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           3203 2 +     15177 AT
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          6025 2 +     16677 AT
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           28215 2 +     35983 AT
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11994746 2 +  12117833 AT
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46481507 2 +  46592721 AT
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      45056 2 -     45581 AT
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       6039 2 +     35577 AT
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        5833 2 -     25661 AT
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        5790 2 -     17744 AT
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        25374 2 +     37128 AT
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           62924 2 -     68416 AA
i Cheirogaleus_major.k141_1157592                       C 0 I 10
s Cheirogaleus_medius.k141_133808                           12025 2 +     13308 AA
i Cheirogaleus_medius.k141_133808                       C 0 I 10
s Cheracebus_lucifer.k141_619653                             9220 2 -     18223 AT
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                               959 2 +    188999 AT
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           45257 2 +     57117 AT
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          49937 2 +     54541 AT
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chiropotes_israelita.k141_1189915                         74739 2 +    196370 AT
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          18920 2 +     40510 AT
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15143559 2 -  15256731 AT
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      38023 2 -     53260 AT
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101148582 2 + 101219884 AT
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Condylura_cristata.JH655880.1                          60621939 2 +  78930452 AA
i Condylura_cristata.JH655880.1                         C 0 I 10
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         1956 1 -      5782 A-
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 I 9
s Cricetomys_gambianus.CriGam_scaffold_949                 282386 2 -    399297 AA
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 I 15
s Cricetulus_griseus.LT883672.1                          53034751 2 +  72327488 AA
i Cricetulus_griseus.LT883672.1                         C 0 I 15
s Cryptoprocta_ferox.CryFer_flattened_line_19014            57261 2 -     70449 AA
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 I 10
s Ctenodactylus_gundi.CteGun_scaffold_447                  213741 2 -    956709 GA
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 I 15
s Cuniculus_paca.CunPac_flattened_line_16637                20592 2 +     26546 GA
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 I 10
s Dasyprocta_punctata.DasPun_flattened_line_634             61730 2 -    236241 GA
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 I 12
s Daubentonia_madagascariensis.ctg11                     16848854 2 +  31942871 AA
i Daubentonia_madagascariensis.ctg11                    C 0 I 10
s Delphinapterus_leucas.KZ290064.1                       80040367 2 -  96802777 AA
i Delphinapterus_leucas.KZ290064.1                      C 0 I 10
s Dicerorhinus_sumatrensis.PEKH010003161.1                 325964 2 +    993696 AA
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 I 10
s Diceros_bicornis.DicBicMic_scaffold_9545                   6605 2 +    151128 AA
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 I 10
s Dipodomys_ordii.KN672545.1                              3659922 2 +   4240102 AA
i Dipodomys_ordii.KN672545.1                            C 0 I 10
s Dipodomys_stephensi.DipSte_scaffold_84338                  2270 2 -     11986 AA
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 I 10
s Dolichotis_patagonum.DolPat_scaffold_14102                39699 2 -     73477 GA
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 I 10
s Elaphurus_davidianus.JRFZ01086400.1                     1495945 2 +   1727528 AA
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 I 10
s Ellobius_lutescens.LOEQ01003611.1                        243552 2 -    369425 AA
i Ellobius_lutescens.LOEQ01003611.1                     C 0 I 15
s Ellobius_talpinus.LOJH01198462.1                           1294 2 -      1901 AA
i Ellobius_talpinus.LOJH01198462.1                      C 0 I 15
s Enhydra_lutris.KZ291749.1                              85877218 2 +  99434291 AA
i Enhydra_lutris.KZ291749.1                             C 0 I 10
s Equus_asinus.JREZ01000062.1                             5856330 2 -   7175178 AA
i Equus_asinus.JREZ01000062.1                           C 0 I 10
s Equus_caballus.CM000402.2                              13354830 2 +  41866177 AA
i Equus_caballus.CM000402.2                             C 0 I 10
s Equus_przewalskii.ATBW01073585.1                          16320 2 +     92910 AA
i Equus_przewalskii.ATBW01073585.1                      C 0 I 10
s Erinaceus_europaeus.JH835290.1                         11540783 2 +  16010500 AA
i Erinaceus_europaeus.JH835290.1                        C 0 I 10
s Erythrocebus_patas.Contig8                             48780592 2 -  48907691 AT
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          318585 2 +    330699 AA
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 I 10
s Eubalaena_japonica.EubJap_flattened_line_7756             65042 2 +     89355 AA
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 I 10
s Eulemur_albifrons.k141_715837                              9007 2 +     13586 AA
i Eulemur_albifrons.k141_715837                         C 0 I 10
s Eulemur_collaris.k141_1015201                              2270 2 -      4292 AA
i Eulemur_collaris.k141_1015201                         C 0 I 10
s Eulemur_coronatus.k141_3240342                            15403 2 +     36558 AA
i Eulemur_coronatus.k141_3240342                        C 0 I 10
s Eulemur_flavifrons.k141_903901                            11728 2 +     60246 AA
i Eulemur_flavifrons.k141_903901                        C 0 I 10
s Eulemur_fulvus.k141_653297                                15211 2 +    109717 AA
i Eulemur_fulvus.k141_653297                            C 0 I 10
s Eulemur_macaco.k141_747087                                 3196 2 -     19505 AA
i Eulemur_macaco.k141_747087                            C 0 I 10
s Eulemur_mongoz.k141_825972                                19868 2 +     27497 AA
i Eulemur_mongoz.k141_825972                            C 0 I 10
s Eulemur_rubriventer.k141_411740                           22324 2 +     26808 AA
i Eulemur_rubriventer.k141_411740                       C 0 I 10
s Eulemur_rufus.k141_1620292                                37059 2 +     46535 AA
i Eulemur_rufus.k141_1620292                            C 0 I 10
s Eulemur_sanfordi.k141_186399                              19798 2 -     29447 AA
i Eulemur_sanfordi.k141_186399                          C 0 I 10
s Felis_catus.AANG03133801.1                                  313 2 -       736 AA
i Felis_catus.AANG03133801.1                            C 0 I 10
s Felis_catus_fca126.CM031420.1                         129285662 2 - 158578461 AA
i Felis_catus_fca126.CM031420.1                         C 0 I 10
s Felis_nigripes.FelNig_flattened_line_8080                 26761 2 +     52776 AA
i Felis_nigripes.FelNig_flattened_line_8080             C 0 I 10
s Fukomys_damarensis.KN123630.1                          13895875 2 -  19261668 GA
i Fukomys_damarensis.KN123630.1                         C 0 I 16
s Galago_moholi.ctg555                                     215061 2 -    847004 AA
i Galago_moholi.ctg555                                  C 0 I 10
s Galago_senegalensis.k141_964197                           17422 2 -     43889 AA
i Galago_senegalensis.k141_964197                       C 0 I 10
s Galagoides_demidoff.k141_1769638                          14565 2 +     27357 AA
i Galagoides_demidoff.k141_1769638                      C 0 I 10
s Galeopterus_variegatus.GalVar_scaffold_354               159305 2 +    324696 AA
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 I 10
s Giraffa_tippelskirchi.LVKQ01S012154.1                    185743 2 -    189561 AA
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 I 10
s Glis_glis.GliGli_scaffold_79770                           16199 1 -     18683 A-
i Glis_glis.GliGli_scaffold_79770                       C 0 I 10
s Gorilla_beringei.k141_111300                               9015 2 -     14630 AT
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119656115 2 - 195582420 AT
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   79544 1 +    118900 A-
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 I 10
s Hapalemur_alaotrensis.k141_1280836                         5791 2 +     10286 AA
i Hapalemur_alaotrensis.k141_1280836                    C 0 I 10
s Hapalemur_gilberti.k141_279011                             4269 2 -     11661 AA
i Hapalemur_gilberti.k141_279011                        C 0 I 10
s Hapalemur_griseus.k141_1387522                             9596 2 +     56096 AA
i Hapalemur_griseus.k141_1387522                        C 0 I 10
s Hapalemur_meridionalis.k141_186231                        32845 2 -     42470 AA
i Hapalemur_meridionalis.k141_186231                    C 0 I 10
s Hapalemur_occidentalis.k141_797938                        49471 2 -     54384 AA
i Hapalemur_occidentalis.k141_797938                    C 0 I 10
s Helogale_parvula.HelPar_flattened_line_22962              22402 2 +     53719 AA
i Helogale_parvula.HelPar_flattened_line_22962          C 0 I 10
s Hemitragus_hylocrius.HemHyl_scaffold_16669                32617 2 -     91191 AA
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 I 10
s Heterocephalus_glaber.JH602058.1                        2560392 2 +  31725842 GA
i Heterocephalus_glaber.JH602058.1                      C 0 I 16
s Heterohyrax_brucei.HetBruBak_scaffold_25354               62604 2 +     73687 AA
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 I 10
s Hippopotamus_amphibius.HipAmp_scaffold_1308              150365 2 +    277961 AA
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 I 10
s Hipposideros_armiger.JXIK01001085.1                      282770 2 -    477199 AA
i Hipposideros_armiger.JXIK01001085.1                   C 0 I 10
s Hipposideros_galeritus.HipGal_scaffold_52959                539 2 +     26078 AA
i Hipposideros_galeritus.HipGal_scaffold_52959          C 0 I 10
s Hoolock_leuconedys.ctg315                                   350013 2 +    431944 AT
i Hoolock_leuconedys.ctg315                                C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           20987 2 -    119109 GA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 I 10
s Hylobates_abbotti.k141_1816750                             1494 2 +      3202 AT
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1633646                              1464 2 -      2102 AT
i Hylobates_agilis.k141_1633646                         C 0 C 0
s Hylobates_klossii.k141_468230                              2981 2 +      5464 AT
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14628329 2 -  25970782 AT
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                             880 2 +      4161 AT
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             36437 2 -     60944 AT
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7130113 2 +  13083262 AA
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 I 10
s Indri_indri.k141_2197838                                   1269 2 +      3484 AA
i Indri_indri.k141_2197838                              C 0 I 9
s Inia_geoffrensis.IniGeo_flattened_line_66725              12579 2 +     17520 AA
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 I 10
s Jaculus_jaculus.JH725517.1                              8577168 2 +  11848649 AG
i Jaculus_jaculus.JH725517.1                            C 0 I 14
s Lagothrix_lagothricha.k141_12968                          53777 2 -    147782 AT
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lemur_catta.scaffold_1                                258411143 2 - 285822530 AA
i Lemur_catta.scaffold_1                                C 0 I 10
s Lepilemur_ankaranensis.k141_884009                        28446 2 +     39228 AT
i Lepilemur_ankaranensis.k141_884009                    C 0 I 10
s Lepilemur_dorsalis.k141_134267                            57810 2 +     63517 AT
i Lepilemur_dorsalis.k141_134267                        C 0 I 10
s Lepilemur_ruficaudatus.k141_574529                        36190 2 -     38897 AT
i Lepilemur_ruficaudatus.k141_574529                    C 0 I 10
s Lepilemur_septentrionalis.k141_710646                      2236 2 -     13103 AT
i Lepilemur_septentrionalis.k141_710646                 C 0 I 10
s Leptonychotes_weddellii.KB714749.1                      3091182 2 -   3498232 AC
i Leptonychotes_weddellii.KB714749.1                    C 0 I 10
s Lepus_americanus.LepAme_scaffold_62849                    19068 2 +     22452 GT
i Lepus_americanus.LepAme_scaffold_62849                C 0 I 1542
s Lipotes_vexillifer.KE558548.1                            139513 2 +   3060487 AA
i Lipotes_vexillifer.KE558548.1                         C 0 I 10
s Lophocebus_aterrimus.ctg55                             19252212 2 +  19376315 AT
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           15009 2 +     84689 AA
i Loris_lydekkerianus.k141_550999                       C 0 I 10
s Loris_tardigradus.ctg97                                 3782748 2 +   6799190 AA
i Loris_tardigradus.ctg97                               C 0 I 10
s Loxodonta_africana.GL010040.1                          20598529 2 -  62548349 AG
i Loxodonta_africana.GL010040.1                         C 0 I 10
s Lycaon_pictus.CM007556.1                               11094950 2 +  39895028 AA
i Lycaon_pictus.CM007556.1                              C 0 I 10
s Macaca_arctoides.k141_2201161                             23963 2 +     74745 AT
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12710424 2 +  12821369 AT
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                2998 2 -     26467 AT
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           50869 2 +     63263 AT
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 2979 2 -     26361 AT
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 6169 2 -      7381 AT
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  49398 2 -     79256 AT
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196039496 2 + 196197964 AT
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11449666 2 +  11645122 AT
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   8352 2 -     46448 AT
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                6014 2 -     13212 AT
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 19695 2 -     55006 AT
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43844810 2 +  43892939 AT
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               20978 2 -     24607 AT
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               8349 2 -     27140 AT
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43441385 2 -  43563597 AT
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4454189 2 -   4543643 AT
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            151950 2 +    252755 GA
i Manis_javanica.JSZB01003966.1                         I 2557 I 10
s Manis_pentadactyla.KN017078.1                             39539 2 +     58827 GA
i Manis_pentadactyla.KN017078.1                         C 0 I 10
s Marmota_marmota.CZRN01000005.1                         36877982 2 +  64221397 AA
i Marmota_marmota.CZRN01000005.1                        C 0 I 10
s Megaderma_lyra.MegLyr_scaffold_3562                       65178 2 -    234502 AA
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 I 8
s Mellivora_capensis.MelCap_flattened_line_15433             6101 2 -     87323 AA
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 I 10
s Meriones_unguiculatus.MerUng_scaffold_9483                 1007 2 +    115071 AG
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 I 15
s Mesocricetus_auratus.KB708139.1                         1051274 2 -  26018355 AA
i Mesocricetus_auratus.KB708139.1                       C 0 I 15
s Mesoplodon_bidens.MesBid_scaffold_96348                    2168 2 -     12939 AA
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 I 10
s Microcebus_murinus.CM007691.1                          16514206 2 +  47401472 AA
i Microcebus_murinus.CM007691.1                         C 0 I 10
s Microtus_ochrogaster.CM001673.1                        22823961 2 -  98408828 AA
i Microtus_ochrogaster.CM001673.1                       C 0 I 15
s Miopithecus_ogouensis.k141_2935907                         5931 2 +     29742 AT
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        16678 2 -    104932 AC
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 I 10
s Monodon_monoceros.MonMon_M_scaffold_5598                 149960 2 +    154973 AA
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 I 10
s Moschus_moschiferus.MosMos_scaffold_78805                  5963 2 -     19904 AA
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 I 10
s Mungos_mungo.MunMun_flattened_line_8729                  150083 2 -    168139 AA
i Mungos_mungo.MunMun_flattened_line_8729               C 0 I 10
s Mus_caroli.LT608236.1                                  70771578 2 +  92629107 AA
i Mus_caroli.LT608236.1                                 C 0 I 15
s Mus_musculus.chr16                                     75493631 2 +  98207768 AA
i Mus_musculus.chr16                                    C 0 I 15
s Mus_pahari.LT608305.1                                  67560008 2 +  89017189 AA
i Mus_pahari.LT608305.1                                 C 0 I 15
s Mus_spretus.CM004110.1                                 74336358 2 +  97876770 AA
i Mus_spretus.CM004110.1                                C 0 I 15
s Mustela_putorius.JH417978.1                             4427946 2 -  28371801 AA
i Mustela_putorius.JH417978.1                           C 0 I 10
s Nannospalax_galili.KL201303.1                            120113 2 +    362372 AA
i Nannospalax_galili.KL201303.1                         C 0 I 12
s Neomonachus_schauinslandi.NINY01007774.1                4490077 2 -  14209539 AC
i Neomonachus_schauinslandi.NINY01007774.1              C 0 I 10
s Neophocaena_asiaeorientalis.KZ688543.1                  3954551 2 -   4490290 AA
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 I 10
s Nomascus_annamensis.k141_1817463                            620 2 -      1070 AT
i Nomascus_annamensis.k141_1817463                      C 0 I 69
s Nomascus_concolor.k141_70405                                620 2 +      1153 AT
i Nomascus_concolor.k141_70405                          C 0 C 0
s Nomascus_gabriellae.k141_1400361                            550 2 -      2203 AT
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_1022                             574 2 -     11638 AT
i Nomascus_siki_b.tarseq_1022                       C 0 C 0
s Nomascus_siki_a.k141_421408                                   464 2 +     16235 AT
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                37815 2 +   3668941 AA
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 I 10
s Nycticebus_bengalensis.LG16                            65571572 2 -  95554990 AA
i Nycticebus_bengalensis.LG16                           C 0 I 10
s Nycticebus_coucang.k141_771591                            14981 2 +     16181 AA
i Nycticebus_coucang.k141_771591                        C 0 I 10
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65679783 1 +  89412551 A-
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 I 9
s Ochotona_princeps.JH802095.1                            4999346 2 -  23139505 GG
i Ochotona_princeps.JH802095.1                          C 0 I 675
s Odobenus_rosmarus.KB229369.1                             684779 2 -   3126709 AA
i Odobenus_rosmarus.KB229369.1                          C 0 I 10
s Odocoileus_virginianus.KZ101650.1                       1083395 2 +   1425656 AA
i Odocoileus_virginianus.KZ101650.1                     C 0 I 10
s Okapia_johnstoni.LVCL01S0017931.1                         41478 2 +     78940 AA
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 I 10
s Ondatra_zibethicus.OndZib_scaffold_6821                  130152 2 +    145789 AA
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 I 15
s Onychomys_torridus.OnyTor_scaffold_12578                  42843 2 +     62360 AA
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 I 15
s Orcinus_orca.KB316965.1                                 7228227 2 -   7562323 AA
i Orcinus_orca.KB316965.1                               C 0 I 10
s Orycteropus_afer.OryAfe_flattened_line_13509              64008 2 -     66828 AA
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 I 10
s Oryctolagus_cuniculus.CM000803.1                      141882086 2 + 163896628 GT
i Oryctolagus_cuniculus.CM000803.1                      C 0 I 1540
s Otocyon_megalotis.JAEUCK010005121.1                      314953 2 -    505867 AA
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 I 10
s Otolemur_crassicaudatus.k141_505435                        4921 2 -     53940 AA
i Otolemur_crassicaudatus.k141_505435                   C 0 I 10
s Otolemur_garnettii.GL873528.1                          18012894 2 -  38779656 AA
i Otolemur_garnettii.GL873528.1                         C 0 I 10
s Ovis_aries.CM001582.2                                 134082407 2 - 275406953 AA
i Ovis_aries.CM001582.2                                 C 0 I 10
s Ovis_canadensis.OviCan_scaffold_6251                      83635 2 +    140051 AA
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 I 10
s Pan_paniscus.CM003386.1                               127578294 2 - 205426864 AT
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120155454 2 - 196562556 AT
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  39681 2 +    295523 AA
i Panthera_onca.PanOnc_flattened_line_1615              C 0 I 10
s Panthera_pardus.KV860323.1                              3643496 2 +  18214204 AA
i Panthera_pardus.KV860323.1                            C 0 I 10
s Panthera_tigris.KE721879.1                              5033144 2 -   6340057 AA
i Panthera_tigris.KE721879.1                            C 0 I 10
s Pantholops_hodgsonii.KE114631.1                         1071276 2 -   1292953 AA
i Pantholops_hodgsonii.KE114631.1                       C 0 I 10
s Papio_anubis.CM001492.2                               188160174 2 - 188283584 AT
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              3264 2 +     25005 AT
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47517546 2 +  47705337 AT
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 71537 2 -    104429 AT
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   10069 2 +     14967 AT
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 5934 2 -      7628 AT
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    121179 2 -    135482 AA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 I 10
s Perodicticus_ibeanus.k141_117958                          10591 2 -     23713 AA
i Perodicticus_ibeanus.k141_117958                      C 0 I 10
s Perodicticus_potto.k141_1136815                           11731 2 +     61070 AA
i Perodicticus_potto.k141_1136815                       C 0 I 10
s Perognathus_longimembris.PerPac_flattened_line_19359       2013 2 +     49596 AA
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 I 10
s Peromyscus_maniculatus.KI615518.1                       4955209 2 -   8017169 AA
i Peromyscus_maniculatus.KI615518.1                     C 0 I 15
s Petromus_typicus.PetTyp_scaffold_33007                    17065 2 -     36578 AA
i Petromus_typicus.PetTyp_scaffold_33007                C 0 I 16
s Phocoena_phocoena.PhoPho_flattened_line_53071              2692 2 +      8220 AA
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 I 10
s Platanista_gangetica.PlaMin_flattened_line_72990           9163 2 +     21690 AA
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 I 10
s Plecturocebus_bernhardi.k141_959214                       25869 2 +     44506 AT
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        26082 2 +     67491 AT
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      16321 2 -     98129 AT
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     25922 2 +    147771 AT
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         2557 2 -     43940 AT
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          6640 2 -     55515 GT
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         25994 2 +    152463 AT
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       3802 2 -    119457 AT
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         15717 2 +    134592 AT
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          26304 2 -     75465 AT
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              190917 2 -    373494 AT
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19811564 2 +  19899266 AT
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                3710 2 -      9567 AA
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 I 10
s Prolemur_simus.MPIZ01000048.1                           6852517 2 +  12164890 AA
i Prolemur_simus.MPIZ01000048.1                         C 0 I 10
s Propithecus_coquerelli.NW_012147863.1                     21546 2 -     30946 aa
i Propithecus_coquerelli.NW_012147863.1                 C 0 I 9
s Propithecus_coronatus.k141_1353159                         7602 2 +     11805 AA
i Propithecus_coronatus.k141_1353159                    C 0 I 9
s Propithecus_diadema.k141_577245                           46950 2 +     52369 AA
i Propithecus_diadema.k141_577245                       C 0 I 9
s Propithecus_edwardsi.k141_1317105                         39337 2 -     44753 AA
i Propithecus_edwardsi.k141_1317105                     C 0 I 9
s Propithecus_perrieri.k141_7554                            21260 2 +     27322 AA
i Propithecus_perrieri.k141_7554                        C 0 I 9
s Propithecus_tattersalli.k141_907138                       20894 2 -     53241 AA
i Propithecus_tattersalli.k141_907138                   C 0 I 9
s Propithecus_verreauxi.k141_158021                         43158 2 -     48185 AA
i Propithecus_verreauxi.k141_158021                     C 0 I 9
s Psammomys_obesus.NESX01026517.1                           38004 2 +     77221 AG
i Psammomys_obesus.NESX01026517.1                       C 0 I 15
s Pteronura_brasiliensis.PteBra_flattened_line_1343        250069 2 -    344369 AA
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 I 10
s Puma_concolor.QAVW01000427.1                          131539792 2 - 161321710 AA
i Puma_concolor.QAVW01000427.1                          C 0 I 10
s Rangifer_tarandus.RanTarSib_scaffold_24239                20259 2 +     68503 AA
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 I 10
s Rattus_norvegicus.chr11                                13917410 2 +  90463843 AA
i Rattus_norvegicus.chr11                               C 0 I 15
s Rhinolophus_sinicus.LVEH01000179.1                      1792370 2 +   2252614 AA
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 I 10
s Saiga_tatarica.SaiTat_scaffold_371890                       669 2 -      4338 AA
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 I 10
s Saimiri_boliviensis.NW_024100938.1                     15676326 2 -  43202129 at
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        8239 2 +     34089 AT
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              8179 2 -     60842 AT
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              8273 2 +     67014 AT
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              8250 2 +     60816 AT
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 8187 2 -     76454 AT
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17344974 2 -  30362882 AT
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         24295 2 -     62485 AT
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   39401 2 -    114521 AA
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 I 10
s Sigmodon_hispidus.SigHis_scaffold_11332                  104772 2 -    120886 AA
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 I 15
s Solenodon_paradoxus.SolPar_flattened_line_1012            23328 2 +    739146 AA
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 I 10
s Spermophilus_dauricus.KZ294190.1                        2243818 2 +   2842873 AA
i Spermophilus_dauricus.KZ294190.1                      C 0 I 10
s Spilogale_gracilis.SpiGra_flattened_line_905             238588 2 -    276980 AA
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 I 10
s Suricata_suricatta.SurSur_flattened_line_20339            32999 2 +     62062 AA
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 I 10
s Sus_scrofa.CM000824.4                                 189274768 2 + 218635234 AA
i Sus_scrofa.CM000824.4                                 C 0 I 10
s Symphalangus_syndactylus.tarseq_24                        18587 2 -  13920577 AT
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      810554 2 +   1148477 AA
i Tapirus_indicus.TapInd_scaffold_176                   C 0 I 10
s Tapirus_terrestris.TapTer_scaffold_14939                  61196 2 +     99546 AA
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 I 10
s Tarsius_lariang.k141_609102                               31141 2 +     42269 AT
i Tarsius_lariang.k141_609102                           C 0 I 10
s Tarsius_wallacei.k141_48636                               64450 2 +     65473 AT
i Tarsius_wallacei.k141_48636                           C 0 I 10
s Theropithecus_gelada.CM009951.1                       194011707 2 - 194193292 AT
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   9291 2 +     90398 AA
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 I 10
s Trichechus_manatus.JH594618.1                          16089603 2 +  31416278 AA
i Trichechus_manatus.JH594618.1                         C 0 I 10
s Tupaia_chinensis.KB320831.1                             2797524 2 -   3938065 AA
i Tupaia_chinensis.KB320831.1                           C 0 I 10
s Tupaia_tana.TupTan_flattened_line_68454                    9453 2 +     13056 AA
i Tupaia_tana.TupTan_flattened_line_68454               C 0 I 10
s Tursiops_truncatus.MRVK01000923.1                      69316956 2 -  96451834 AA
i Tursiops_truncatus.MRVK01000923.1                     C 0 I 10
s Uropsilus_gracilis.UroGra_scaffold_69449                   9927 2 +     10241 AG
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 I 10
s Ursus_maritimus.KK498671.1                              6520253 2 +  28682327 AG
i Ursus_maritimus.KK498671.1                            C 0 I 10
s Varecia_rubra.k141_432109                                  9159 2 -     20643 AA
i Varecia_rubra.k141_432109                             C 0 I 10
s Varecia_variegata.k141_775891                             28694 2 -     33872 AA
i Varecia_variegata.k141_775891                         C 0 I 10
s Vicugna_pacos.KN269600.1                                1527989 2 -   2331223 AA
i Vicugna_pacos.KN269600.1                              C 0 I 10
s Vulpes_lagopus.VulLag_flattened_line_2045                144180 2 -    281493 AA
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 I 10
s Xerus_inauris.XerIna_scaffold_7898                       131314 2 -    134049 AA
i Xerus_inauris.XerIna_scaffold_7898                    C 0 I 10
s Zalophus_californianus.ZalCal_flattened_line_4097        219635 2 -    227762 AA
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 I 10
s Zapus_hudsonius.ZapHud_scaffold_256618                      254 2 -      2259 AA
i Zapus_hudsonius.ZapHud_scaffold_256618                C 0 I 13
s Ziphius_cavirostris.ZipCav_flattened_line_60625            1700 2 -     13665 AT
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 I 10
e Eptesicus_fuscus.JH977687.1                             4708429 237 +   6522550 I
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Sorex_araneus.JH798170.1                               17769792 7 -  27805282 I
e Dinomys_branickii.DinBra_scaffold_1996                   158442 1030 +    228994 I
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           4051 456 -      6963 I
e Chrysochloris_asiatica.ChrAsi_scaffold_629495              1971 9 -      3120 I
e Tonatia_saurophila.TonSau_scaffold_3334                  137563 275 -    259118 I
e Tamandua_tetradactyla.TamTet_scaffold_26877               16259 379 +     45698 I
e Tadarida_brasiliensis.TadBra_scaffold_61492                1822 242 +     20549 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Pteronotus_parnellii.KE867983.1                            5588 252 -     27784 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            98516 773 +    112873 I
e Noctilio_leporinus.NocLep_scaffold_12062                  50214 77 +     94413 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             6589 379 -      8794 I
e Myotis_myotis.MyoMyo_scaffold_6123                        13515 236 +     66751 I
e Myotis_lucifugus.GL429887.1                             3468272 238 -   3747815 I
e Myotis_davidii.KB114863.1                               5022194 233 +   6462685 I
e Myotis_brandtii.KE161952.1                               970769 237 +   8389877 I
e Murina_feae.MurFea_scaffold_2254                          23900 236 -    100666 I
e Mormoops_blainvillei.MorMeg_scaffold_2952                162937 259 +    265003 I
e Miniopterus_schreibersii.MinSch_scaffold_24116            36998 214 +     45743 I
e Miniopterus_natalensis.LDJU01000022.1                   8212509 213 +  10048721 I
e Micronycteris_hirsuta.MicHir_scaffold_37978               24387 274 -     32043 I
e Microgale_talazaci.MicTal_scaffold_34660                  41234 3 -     48017 I
e Lasiurus_borealis.LasBor_scaffold_59542                    5042 241 +     26176 I
e Kogia_breviceps.KogBre_flattened_line_35920               27132 184 +     37189 I
e Hyaena_hyaena.HyaHya_flattened_line_20729                 22998 0 -     67322 C
e Elephantulus_edwardii.JH947210.1                        7830035 1277 +  15467074 I
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Echinops_telfairi.JH980316.1                           22999931 2 -  44670279 I
e Desmodus_rotundus.KZ672188.1                           18700517 262 -  18957592 I
e Dasypus_novemcinctus.JH568778.1                          185121 383 -   6883506 I
e Crocidura_indochinensis.CroInd_scaffold_27484              1364 7 -     22648 I
e Choloepus_hoffmanni.KN194586.1                           763329 503 +    964067 I
e Choloepus_didactylus.ChoDid_scaffold_36182                18024 504 -     21363 I
e Carollia_perspicillata.CarPer_scaffold_4436               61226 261 +     67245 I
e Artibeus_jamaicensis.ArtJam_scaffold_41619                10440 261 -     29036 I
e Anoura_caudifer.AnoCau_scaffold_422                      392020 257 -    631301 I
e Trachypithecus_pileatus.k141_1022309                       5226 0 +     13828 C
e Trachypithecus_phayrei.ctg3                            44662914 0 -  44834318 C
e Trachypithecus_obscurus.k141_1115109                       8130 0 -     28054 C
e Trachypithecus_melamera.k141_699241                        2986 0 -     24393 C
e Trachypithecus_leucocephalus.k141_381681                   3005 0 +     12481 C
e Trachypithecus_laotum.k141_760702                          4719 0 +     14371 C
e Trachypithecus_hatinhensis.k141_504423                     6067 0 -     15592 C
e Trachypithecus_germaini.k141_868450                        3883 0 -     11566 C
e Trachypithecus_geei.k141_670367                           46082 0 -     54611 C
e Trachypithecus_francoisi.k141_768164                       4689 0 -     14244 C
e Trachypithecus_cristatus.k141_1011511                      5261 0 -     12939 C
e Trachypithecus_crepusculus.k141_1588528                   23360 0 -     32910 C
e Trachypithecus_auratus.k141_738098                        29800 0 +     38948 C
e Semnopithecus_vetulus.k141_1143185                        16479 0 +     30600 C
e Semnopithecus_schistaceus.k141_387461                     33457 0 +     42640 C
e Semnopithecus_priam.k141_410937                           40312 0 +     46263 C
e Semnopithecus_johnii.k141_785014                         121532 0 +    130994 C
e Semnopithecus_hypoleucos.k141_761524                      11528 0 +     20762 C
e Semnopithecus_entellus.k141_1572367                        6153 0 +     15331 C
e Rhinopithecus_strykeri.ctg4                            44859307 0 -  45163003 C
e Rhinopithecus_bieti.k119_554384                            2917 0 -     17045 C
e Pygathrix_nigripes_a.k141_101123                             8537 0 +     18040 C
e Pygathrix_nigripes_b.ctg79                                 6809148 0 +   6970761 C
e Pygathrix_cinerea.k141_374971                             32651 0 +     56732 C
e Presbytis_mitrata.k141_860013                              8661 0 +     14865 C
e Presbytis_comata.k141_672698                               8546 0 -     15069 C
e Pithecia_vanzolinii.k141_831006                           15424 0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514 0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521 0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292 0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093 0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038 0 +     78826 C
e Pithecia_albicans.k141_991845                             45662 0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000036.1               26743271 0 +  26888534 C
e Piliocolobus_kirkii.k141_929665                            4788 0 +      7694 C
e Piliocolobus_gordonorum.k141_1270531                       5421 0 -     17985 C
e Piliocolobus_badius.k141_1987485                           4802 0 -      5908 C
e Octodon_degus.JH651621.1                                3687420 1881 +  10294119 I
e Nasalis_larvatus.k141_153429                              11264 0 +     48152 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     91920 1922 -    117718 I
e Muscardinus_avellanarius.MusAve_scaffold_9643             14637 1 +     98495 I
e Mirza_zaza.k141_593947                                     4888 10 -     12809 I
e Hystrix_cristata.HysCri_scaffold_50788                     7688 1865 +     22540 I
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 32592 1717 -     67205 I
e Colobus_polykomos.k141_1406057                            19335 0 +     23629 C
e Colobus_guereza.LG08                                  147667351 0 + 156195979 C
e Colobus_angolensis.KN985967.1                          10889423 0 +  10971483 C
e Chinchilla_lanigera.JH721867.1                         15963245 964 +  43084221 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               17313 4 +    209709 TTTC
s Acinonyx_jubatus.LLWD01000356.1                         2039279 4 +   3721120 TTTC
i Acinonyx_jubatus.LLWD01000356.1                       I 10 I 9
s Acomys_cahirinus.AcoCah_scaffold_1625                    117531 1 -    189883 G---
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 15 I 7
s Ailuropoda_melanoleuca.LNAT01000321.1                  10662971 4 +  23371972 TTTC
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 10 I 9
s Ailurus_fulgens.LNAC01000003.1                          7099759 4 -  16596857 TTTC
i Ailurus_fulgens.LNAC01000003.1                        I 10 I 9
s Allactaga_bullata.AllBul_scaffold_70162                   21491 1 -     22067 G---
i Allactaga_bullata.AllBul_scaffold_70162               I 14 I 7
s Allenopithecus_nigroviridis.k141_2469532                   5185 4 -     60446 TTCC
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         5902 4 -     29318 TTCC
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         4840 4 +     38766 TTCC
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          5796 4 -     80423 TTCC
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                               768 4 +     19852 TTCC
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                3024 4 -     12443 TTCC
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                              323 4 +      5070 TTCC
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                   68 4 -      1641 TTCC
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          2807 4 -     24210 TTCC
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           29389 4 -     30219 TTCC
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_405616                              5225 4 +     16794 TTCC
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                             357 4 -      1470 TTCC
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             4502 4 -      9835 TTCC
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3525279 4 +   4113121 ATCC
i Ammotragus_lervia.NIVO01013474.1                      I 10 I 9
s Anoura_caudifer.AnoCau_scaffold_422                      392277 2 -    631301 ct--
i Anoura_caudifer.AnoCau_scaffold_422                   I 257 I 17
s Antilocapra_americana.AntAmePen_scaffold_27338             2710 4 +     55446 ATTC
i Antilocapra_americana.AntAmePen_scaffold_27338        I 10 I 9
s Aotus_azarae.k141_3170768                                 66115 4 +     78111 TTCC
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            9061 4 +     22701 TTCC
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5753019 4 +   9889416 ttcc
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             9617 4 -    104377 TTCC
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               9624 4 +     23246 TTCC
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     2146 1 +     11424 T---
i Aplodontia_rufa.AprRuf_scaffold_101456                I 10 I 12
s Arctocebus_calabarensis.k141_587554                        6232 4 +      9265 TTCC
i Arctocebus_calabarensis.k141_587554                   I 10 I 9
s Artibeus_jamaicensis.ArtJam_scaffold_41619                10701 2 -     29036 ct--
i Artibeus_jamaicensis.ArtJam_scaffold_41619            I 261 I 17
s Ateles_geoffroyi_b.tarseq_2582                             9542910 4 +  39197703 TTCC
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             64183 4 +     85812 TTCC
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                15196 4 +     89302 TTCC
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             19697 4 -     58268 TTCC
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             67691 4 +    119057 TTCC
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               9660 4 -     25888 TTCC
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                10707 4 -     16375 TTCC
i Avahi_laniger.k141_2840928                            I 8 I 9
s Avahi_peyrierasi.k141_798820                               4323 4 +      6337 TTCC
i Avahi_peyrierasi.k141_798820                          I 8 I 9
s Balaenoptera_acutorostrata.KI537095.1                  26383754 4 +  51448160 TTCT
i Balaenoptera_acutorostrata.KI537095.1                 I 10 I 9
s Balaenoptera_bonaerensis.DF502048.1                        8927 4 -     13118 TTCT
i Balaenoptera_bonaerensis.DF502048.1                   I 10 I 9
s Beatragus_hunteri.BeaHun_scaffold_21644                   47741 4 -     72089 TTCC
i Beatragus_hunteri.BeaHun_scaffold_21644               I 10 I 9
s Bison_bison.KN264915.1                                   301885 4 -   6870073 ATCC
i Bison_bison.KN264915.1                                I 10 I 9
s Bos_indicus.CM003021.1                                 22955983 4 + 161108492 ATCC
i Bos_indicus.CM003021.1                                I 10 I 9
s Bos_mutus.JH883513.1                                     418248 4 +    998990 ATCC
i Bos_mutus.JH883513.1                                  I 10 I 9
s Bos_taurus.CM000177.6                                  22664637 4 + 158972876 ATCC
i Bos_taurus.CM000177.6                                 I 10 I 9
s Bubalus_bubalis.KI419065.1                               674400 4 +   1914593 ATCC
i Bubalus_bubalis.KI419065.1                            I 10 I 9
s Cacajao_ayresi.k141_724503                               117562 4 -    171031 TTTC
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 16582 4 +    125063 TTTC
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                18629 4 -    216513 TTTC
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       11172 4 -    134917 TTTC
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3222891 4 -   8989139 TTCC
i Camelus_bactrianus.KN276303.1                         I 10 I 9
s Camelus_dromedarius.KN271192.1                           400593 4 -  15254737 TTCC
i Camelus_dromedarius.KN271192.1                        I 10 I 9
s Camelus_ferus.KB016973.1                                2976329 4 +   6889770 TTCC
i Camelus_ferus.KB016973.1                              I 10 I 9
s CanFam4.chr31                                          11526112 4 +  39901454 TTTC
i CanFam4.chr31                                         I 10 I 9
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   21086 4 +     87036 TTTC
i Canis_lupus_VD.CanFam_VD_scaffold_16982               I 10 I 9
s Canis_lupus_dingo.QKWQ01001993.1                       11272795 4 -  35597290 TTTC
i Canis_lupus_dingo.QKWQ01001993.1                      I 10 I 9
s Canis_lupus_familiaris.chr31                           11095506 4 +  39895921 TTTC
i Canis_lupus_familiaris.chr31                          I 10 I 9
s Canis_lupus_orion.HG994411.1                           16462291 4 -  44759192 TTTC
i Canis_lupus_orion.HG994411.1                          I 10 I 9
s Capra_aegagrus.CM003214.1                              21330359 4 + 157394656 ATCC
i Capra_aegagrus.CM003214.1                             I 10 I 9
s Capra_hircus.CM004562.1                               135711576 4 - 157403528 ATCC
i Capra_hircus.CM004562.1                               I 10 I 9
s Carlito_syrichta.NW_007248099.1                          313296 4 +    345090 TTCC
i Carlito_syrichta.NW_007248099.1                       I 10 I 9
s Carollia_perspicillata.CarPer_scaffold_4436               61487 2 +     67245 ct--
i Carollia_perspicillata.CarPer_scaffold_4436           I 261 I 17
s Catagonus_wagneri.CatWag_scaffold_1305                   162426 4 -    276539 TTCT
i Catagonus_wagneri.CatWag_scaffold_1305                I 10 I 6
s Cavia_aperea.AVPZ01000278.1                            15789432 1 -  24422027 T---
i Cavia_aperea.AVPZ01000278.1                           I 10 I 7
s Cavia_porcellus.DS562889.1                             15801371 1 -  24440124 T---
i Cavia_porcellus.DS562889.1                            I 10 I 7
s Cavia_tschudii.CavTsc_scaffold_488                       179543 1 +    436027 T---
i Cavia_tschudii.CavTsc_scaffold_488                    I 10 I 7
s Cebus_albifrons.Contig22                               18894395 4 -  29618158 TTCC
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                11939 4 -     26817 TTCC
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                16183 4 +     25043 TTCC
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                        12300 4 +     21754 TTCC
i Cephalopachus_bancanus.k141_702587                    I 10 I 9
s Ceratotherium_simum.JH767818.1                          4367329 4 +   7569818 TTCC
i Ceratotherium_simum.JH767818.1                        I 10 I 9
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         7086 4 -      9338 TTCC
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    I 10 I 9
s Cercocebus_atys.KQ010443.1                              6559126 4 +   6739814 TTCC
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      30603 4 +     60454 TTCC
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          5807 4 -     21101 TTCC
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         63117 4 -    107033 TTCC
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        5980 4 -     17608 TTCC
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          3145 4 +     45019 TTCC
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           3205 4 +     15177 TTCC
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          6027 4 +     16677 TTCC
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           28217 4 +     35983 TTCC
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11994748 4 +  12117833 TTCC
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46481509 4 +  46592721 TTCC
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      45058 4 -     45581 TTCC
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       6041 4 +     35577 TTCC
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        5835 4 -     25661 TTCC
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        5792 4 -     17744 TTCC
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        25376 4 +     37128 TTCC
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           62936 4 -     68416 TTCC
i Cheirogaleus_major.k141_1157592                       I 10 I 4
s Cheirogaleus_medius.k141_133808                           12037 4 +     13308 TTCC
i Cheirogaleus_medius.k141_133808                       I 10 I 9
s Cheracebus_lucifer.k141_619653                             9222 4 -     18223 TTCC
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                               961 4 +    188999 TTCC
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           45259 4 +     57117 TTCC
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          49939 4 +     54541 TTCC
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chiropotes_israelita.k141_1189915                         74741 4 +    196370 TTTC
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          18922 4 +     40510 TTTC
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15143561 4 -  15256731 TTCC
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      38025 4 -     53260 TTCC
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101148584 4 + 101219884 TTCC
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_629495              1980 4 -      3120 ATAC
i Chrysochloris_asiatica.ChrAsi_scaffold_629495         I 9 I 9
s Condylura_cristata.JH655880.1                          60621951 4 +  78930452 TTCC
i Condylura_cristata.JH655880.1                         I 10 I 9
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         1966 4 -      5782 TTCC
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    I 9 I 9
s Cricetomys_gambianus.CriGam_scaffold_949                 282403 1 -    399297 G---
i Cricetomys_gambianus.CriGam_scaffold_949              I 15 I 7
s Cricetulus_griseus.LT883672.1                          53034768 1 +  72327488 G---
i Cricetulus_griseus.LT883672.1                         I 15 I 7
s Crocidura_indochinensis.CroInd_scaffold_27484              1371 3 -     22648 TCC-
i Crocidura_indochinensis.CroInd_scaffold_27484         I 7 I 16
s Cryptoprocta_ferox.CryFer_flattened_line_19014            57273 4 -     70449 TTTC
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 10 I 9
s Ctenodactylus_gundi.CteGun_scaffold_447                  213758 1 -    956709 C---
i Ctenodactylus_gundi.CteGun_scaffold_447               I 15 I 7
s Cuniculus_paca.CunPac_flattened_line_16637                20604 1 +     26546 T---
i Cuniculus_paca.CunPac_flattened_line_16637            I 10 I 7
s Dasyprocta_punctata.DasPun_flattened_line_634             61744 1 -    236241 T---
i Dasyprocta_punctata.DasPun_flattened_line_634         I 12 I 7
s Daubentonia_madagascariensis.ctg11                     16848866 4 +  31942871 TTCC
i Daubentonia_madagascariensis.ctg11                    I 10 I 9
s Delphinapterus_leucas.KZ290064.1                       80040379 4 -  96802777 TTTT
i Delphinapterus_leucas.KZ290064.1                      I 10 I 9
s Desmodus_rotundus.KZ672188.1                           18700779 2 -  18957592 GT--
i Desmodus_rotundus.KZ672188.1                          I 262 I 146
s Dicerorhinus_sumatrensis.PEKH010003161.1                 325976 4 +    993696 TTCC
i Dicerorhinus_sumatrensis.PEKH010003161.1              I 10 I 9
s Diceros_bicornis.DicBicMic_scaffold_9545                   6617 4 +    151128 TTCC
i Diceros_bicornis.DicBicMic_scaffold_9545              I 10 I 9
s Dipodomys_ordii.KN672545.1                              3659934 1 +   4240102 T---
i Dipodomys_ordii.KN672545.1                            I 10 I 12
s Dipodomys_stephensi.DipSte_scaffold_84338                  2282 1 -     11986 T---
i Dipodomys_stephensi.DipSte_scaffold_84338             I 10 I 12
s Dolichotis_patagonum.DolPat_scaffold_14102                39711 1 -     73477 T---
i Dolichotis_patagonum.DolPat_scaffold_14102            I 10 I 7
s Elaphurus_davidianus.JRFZ01086400.1                     1495957 4 +   1727528 ATCC
i Elaphurus_davidianus.JRFZ01086400.1                   I 10 I 9
s Ellobius_lutescens.LOEQ01003611.1                        243569 1 -    369425 G---
i Ellobius_lutescens.LOEQ01003611.1                     I 15 I 7
s Ellobius_talpinus.LOJH01198462.1                           1311 1 -      1901 G---
i Ellobius_talpinus.LOJH01198462.1                      I 15 I 7
s Enhydra_lutris.KZ291749.1                              85877230 4 +  99434291 TTTT
i Enhydra_lutris.KZ291749.1                             I 10 I 9
s Eptesicus_fuscus.JH977687.1                             4708666 2 +   6522550 CT--
i Eptesicus_fuscus.JH977687.1                           I 237 I 17
s Equus_asinus.JREZ01000062.1                             5856342 4 -   7175178 TTCC
i Equus_asinus.JREZ01000062.1                           I 10 I 9
s Equus_caballus.CM000402.2                              13354842 4 +  41866177 TTCC
i Equus_caballus.CM000402.2                             I 10 I 9
s Equus_przewalskii.ATBW01073585.1                          16332 4 +     92910 TTCC
i Equus_przewalskii.ATBW01073585.1                      I 10 I 9
s Erinaceus_europaeus.JH835290.1                         11540795 3 +  16010500 TAC-
i Erinaceus_europaeus.JH835290.1                        I 10 I 9
s Erythrocebus_patas.Contig8                             48780594 4 -  48907691 TTCC
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          318597 4 +    330699 TTCT
i Eschrichtius_robustus.EscRob_flattened_line_685       I 10 I 9
s Eubalaena_japonica.EubJap_flattened_line_7756             65054 4 +     89355 TTCT
i Eubalaena_japonica.EubJap_flattened_line_7756         I 10 I 9
s Eulemur_albifrons.k141_715837                              9019 4 +     13586 TTCC
i Eulemur_albifrons.k141_715837                         I 10 I 9
s Eulemur_collaris.k141_1015201                              2282 4 -      4292 TTCC
i Eulemur_collaris.k141_1015201                         I 10 I 9
s Eulemur_coronatus.k141_3240342                            15415 4 +     36558 TTCC
i Eulemur_coronatus.k141_3240342                        I 10 I 9
s Eulemur_flavifrons.k141_903901                            11740 4 +     60246 TTCC
i Eulemur_flavifrons.k141_903901                        I 10 I 9
s Eulemur_fulvus.k141_653297                                15223 4 +    109717 TTCC
i Eulemur_fulvus.k141_653297                            I 10 I 9
s Eulemur_macaco.k141_747087                                 3208 4 -     19505 TTCC
i Eulemur_macaco.k141_747087                            I 10 I 9
s Eulemur_mongoz.k141_825972                                19880 4 +     27497 TTCC
i Eulemur_mongoz.k141_825972                            I 10 I 9
s Eulemur_rubriventer.k141_411740                           22336 4 +     26808 TTCC
i Eulemur_rubriventer.k141_411740                       I 10 I 9
s Eulemur_rufus.k141_1620292                                37071 4 +     46535 TTCC
i Eulemur_rufus.k141_1620292                            I 10 I 9
s Eulemur_sanfordi.k141_186399                              19810 4 -     29447 TTCC
i Eulemur_sanfordi.k141_186399                          I 10 I 9
s Felis_catus.AANG03133801.1                                  325 4 -       736 TTTC
i Felis_catus.AANG03133801.1                            I 10 I 9
s Felis_catus_fca126.CM031420.1                         129285674 4 - 158578461 TTTC
i Felis_catus_fca126.CM031420.1                         I 10 I 9
s Felis_nigripes.FelNig_flattened_line_8080                 26773 4 +     52776 TTTC
i Felis_nigripes.FelNig_flattened_line_8080             I 10 I 9
s Fukomys_damarensis.KN123630.1                          13895893 1 -  19261668 T---
i Fukomys_damarensis.KN123630.1                         I 16 I 7
s Galago_moholi.ctg555                                     215073 4 -    847004 TTCT
i Galago_moholi.ctg555                                  I 10 I 9
s Galago_senegalensis.k141_964197                           17434 4 -     43889 TTCT
i Galago_senegalensis.k141_964197                       I 10 I 9
s Galagoides_demidoff.k141_1769638                          14577 4 +     27357 TTCT
i Galagoides_demidoff.k141_1769638                      I 10 I 9
s Galeopterus_variegatus.GalVar_scaffold_354               159317 4 +    324696 TTCC
i Galeopterus_variegatus.GalVar_scaffold_354            I 10 I 9
s Giraffa_tippelskirchi.LVKQ01S012154.1                    185755 4 -    189561 ATCC
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 10 I 9
s Glis_glis.GliGli_scaffold_79770                           16210 1 -     18683 T---
i Glis_glis.GliGli_scaffold_79770                       I 10 I 12
s Gorilla_beringei.k141_111300                               9017 4 -     14630 TTCC
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119656117 4 - 195582420 TTCC
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   79555 1 +    118900 T---
i Graphiurus_murinus.GraMur_scaffold_4493               I 10 I 12
s Hapalemur_alaotrensis.k141_1280836                         5803 4 +     10286 TTCC
i Hapalemur_alaotrensis.k141_1280836                    I 10 I 9
s Hapalemur_gilberti.k141_279011                             4281 4 -     11661 TTCC
i Hapalemur_gilberti.k141_279011                        I 10 I 9
s Hapalemur_griseus.k141_1387522                             9608 4 +     56096 TTCC
i Hapalemur_griseus.k141_1387522                        I 10 I 9
s Hapalemur_meridionalis.k141_186231                        32857 4 -     42470 TTCC
i Hapalemur_meridionalis.k141_186231                    I 10 I 9
s Hapalemur_occidentalis.k141_797938                        49483 4 -     54384 TTCC
i Hapalemur_occidentalis.k141_797938                    I 10 I 9
s Helogale_parvula.HelPar_flattened_line_22962              22414 4 +     53719 TTTC
i Helogale_parvula.HelPar_flattened_line_22962          I 10 I 9
s Hemitragus_hylocrius.HemHyl_scaffold_16669                32629 4 -     91191 ATCC
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 10 I 6
s Heterocephalus_glaber.JH602058.1                        2560410 1 +  31725842 T---
i Heterocephalus_glaber.JH602058.1                      I 16 I 7
s Heterohyrax_brucei.HetBruBak_scaffold_25354               62616 4 +     73687 AACC
i Heterohyrax_brucei.HetBruBak_scaffold_25354           I 10 I 9
s Hippopotamus_amphibius.HipAmp_scaffold_1308              150377 4 +    277961 TTCT
i Hippopotamus_amphibius.HipAmp_scaffold_1308           I 10 I 9
s Hipposideros_armiger.JXIK01001085.1                      282782 4 -    477199 TTCC
i Hipposideros_armiger.JXIK01001085.1                   I 10 I 9
s Hipposideros_galeritus.HipGal_scaffold_52959                551 4 +     26078 TTCC
i Hipposideros_galeritus.HipGal_scaffold_52959          I 10 I 9
s Hoolock_leuconedys.ctg315                                   350015 4 +    431944 TTCT
i Hoolock_leuconedys.ctg315                                C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           20999 1 -    119109 T---
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       I 10 I 7
s Hylobates_abbotti.k141_1816750                             1496 4 +      3202 TTCT
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1633646                              1466 4 -      2102 TTCT
i Hylobates_agilis.k141_1633646                         C 0 C 0
s Hylobates_klossii.k141_468230                              2983 4 +      5464 TTCT
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14628331 4 -  25970782 TTCT
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                             882 4 +      4161 TTCT
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             36439 4 -     60944 TTCT
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7130125 1 +  13083262 T---
i Ictidomys_tridecemlineatus.JH393315.1                 I 10 I 12
s Indri_indri.k141_2197838                                   1280 4 +      3484 TTCC
i Indri_indri.k141_2197838                              I 9 I 9
s Inia_geoffrensis.IniGeo_flattened_line_66725              12591 4 +     17520 TTCT
i Inia_geoffrensis.IniGeo_flattened_line_66725          I 10 I 9
s Jaculus_jaculus.JH725517.1                              8577184 1 +  11848649 G---
i Jaculus_jaculus.JH725517.1                            I 14 I 7
s Lagothrix_lagothricha.k141_12968                          53779 4 -    147782 TTCC
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    5283 2 +     26176 ct--
i Lasiurus_borealis.LasBor_scaffold_59542               I 241 I 17
s Lemur_catta.scaffold_1                                258411155 4 - 285822530 TTCC
i Lemur_catta.scaffold_1                                I 10 I 9
s Lepilemur_ankaranensis.k141_884009                        28458 4 +     39228 TCCC
i Lepilemur_ankaranensis.k141_884009                    I 10 I 9
s Lepilemur_dorsalis.k141_134267                            57822 4 +     63517 TCCC
i Lepilemur_dorsalis.k141_134267                        I 10 I 9
s Lepilemur_ruficaudatus.k141_574529                        36202 4 -     38897 TCCC
i Lepilemur_ruficaudatus.k141_574529                    I 10 I 9
s Lepilemur_septentrionalis.k141_710646                      2248 4 -     13103 TCCC
i Lepilemur_septentrionalis.k141_710646                 I 10 I 9
s Leptonychotes_weddellii.KB714749.1                      3091194 4 -   3498232 TTTC
i Leptonychotes_weddellii.KB714749.1                    I 10 I 9
s Lepus_americanus.LepAme_scaffold_62849                    20612 4 +     22452 TTCC
i Lepus_americanus.LepAme_scaffold_62849                I 1542 I 9
s Lipotes_vexillifer.KE558548.1                            139525 4 +   3060487 TTCT
i Lipotes_vexillifer.KE558548.1                         I 10 I 9
s Lophocebus_aterrimus.ctg55                             19252214 4 +  19376315 TTCC
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           15021 4 +     84689 TTCC
i Loris_lydekkerianus.k141_550999                       I 10 I 9
s Loris_tardigradus.ctg97                                 3782760 4 +   6799190 TTCC
i Loris_tardigradus.ctg97                               I 10 I 9
s Loxodonta_africana.GL010040.1                          20598541 4 -  62548349 ATCC
i Loxodonta_africana.GL010040.1                         I 10 I 9
s Lycaon_pictus.CM007556.1                               11094962 4 +  39895028 TTTC
i Lycaon_pictus.CM007556.1                              I 10 I 9
s Macaca_arctoides.k141_2201161                             23965 4 +     74745 TTCC
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12710426 4 +  12821369 TTCC
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                3000 4 -     26467 TTCC
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           50871 4 +     63263 TTCC
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 2981 4 -     26361 TTCC
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 6171 4 -      7381 TTCC
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  49400 4 -     79256 TTCC
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196039498 4 + 196197964 TTCC
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11449668 4 +  11645122 TTCC
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   8354 4 -     46448 TTCC
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                6016 4 -     13212 TTCC
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 19697 4 -     55006 TTCC
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43844812 4 +  43892939 TTCC
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               20980 4 -     24607 TTCC
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               8351 4 -     27140 TTCC
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43441387 4 -  43563597 TTCC
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4454191 4 -   4543643 TTCC
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            151962 4 +    252755 TTCC
i Manis_javanica.JSZB01003966.1                         I 10 I 9
s Manis_pentadactyla.KN017078.1                             39551 4 +     58827 TTCC
i Manis_pentadactyla.KN017078.1                         I 10 I 9
s Marmota_marmota.CZRN01000005.1                         36877994 1 +  64221397 T---
i Marmota_marmota.CZRN01000005.1                        I 10 I 12
s Megaderma_lyra.MegLyr_scaffold_3562                       65188 4 -    234502 GGCC
i Megaderma_lyra.MegLyr_scaffold_3562                   I 8 I 9
s Mellivora_capensis.MelCap_flattened_line_15433             6113 4 -     87323 TTTC
i Mellivora_capensis.MelCap_flattened_line_15433        I 10 I 9
s Meriones_unguiculatus.MerUng_scaffold_9483                 1024 1 +    115071 G---
i Meriones_unguiculatus.MerUng_scaffold_9483            I 15 I 7
s Mesocricetus_auratus.KB708139.1                         1051291 1 -  26018355 G---
i Mesocricetus_auratus.KB708139.1                       I 15 I 7
s Mesoplodon_bidens.MesBid_scaffold_96348                    2180 4 -     12939 TTCT
i Mesoplodon_bidens.MesBid_scaffold_96348               I 10 I 9
s Microcebus_murinus.CM007691.1                          16514218 4 +  47401472 GTCC
i Microcebus_murinus.CM007691.1                         I 10 I 9
s Microgale_talazaci.MicTal_scaffold_34660                  41237 4 -     48017 TTTC
i Microgale_talazaci.MicTal_scaffold_34660              I 3 I 9
s Micronycteris_hirsuta.MicHir_scaffold_37978               24661 2 -     32043 ct--
i Micronycteris_hirsuta.MicHir_scaffold_37978           I 274 I 17
s Microtus_ochrogaster.CM001673.1                        22823978 1 -  98408828 G---
i Microtus_ochrogaster.CM001673.1                       I 15 I 7
s Miniopterus_natalensis.LDJU01000022.1                   8212722 2 +  10048721 CT--
i Miniopterus_natalensis.LDJU01000022.1                 I 213 I 21
s Miniopterus_schreibersii.MinSch_scaffold_24116            37212 2 +     45743 ct--
i Miniopterus_schreibersii.MinSch_scaffold_24116        I 214 I 21
s Miopithecus_ogouensis.k141_2935907                         5933 4 +     29742 TTCC
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        16690 4 -    104932 TTTC
i Mirounga_angustirostris.MirAng_flattened_line_8852    I 10 I 9
s Mirza_zaza.k141_593947                                     4898 4 -     12809 TTCC
i Mirza_zaza.k141_593947                                I 10 I 9
s Monodon_monoceros.MonMon_M_scaffold_5598                 149972 4 +    154973 TTCT
i Monodon_monoceros.MonMon_M_scaffold_5598              I 10 I 9
s Mormoops_blainvillei.MorMeg_scaffold_2952                163196 2 +    265003 ct--
i Mormoops_blainvillei.MorMeg_scaffold_2952             I 259 I 17
s Moschus_moschiferus.MosMos_scaffold_78805                  5975 4 -     19904 ATCC
i Moschus_moschiferus.MosMos_scaffold_78805             I 10 I 9
s Mungos_mungo.MunMun_flattened_line_8729                  150095 4 -    168139 TTTC
i Mungos_mungo.MunMun_flattened_line_8729               I 10 I 9
s Murina_feae.MurFea_scaffold_2254                          24136 2 -    100666 ct--
i Murina_feae.MurFea_scaffold_2254                      I 236 I 17
s Mus_caroli.LT608236.1                                  70771595 1 +  92629107 G---
i Mus_caroli.LT608236.1                                 I 15 I 7
s Mus_musculus.chr16                                     75493648 1 +  98207768 G---
i Mus_musculus.chr16                                    I 15 I 7
s Mus_pahari.LT608305.1                                  67560025 1 +  89017189 G---
i Mus_pahari.LT608305.1                                 I 15 I 7
s Mus_spretus.CM004110.1                                 74336375 1 +  97876770 g---
i Mus_spretus.CM004110.1                                I 15 I 7
s Mustela_putorius.JH417978.1                             4427958 4 -  28371801 TTTC
i Mustela_putorius.JH417978.1                           I 10 I 9
s Myotis_brandtii.KE161952.1                               971006 2 +   8389877 TT--
i Myotis_brandtii.KE161952.1                            I 237 I 17
s Myotis_davidii.KB114863.1                               5022427 2 +   6462685 TT--
i Myotis_davidii.KB114863.1                             I 233 I 17
s Myotis_lucifugus.GL429887.1                             3468510 2 -   3747815 TT--
i Myotis_lucifugus.GL429887.1                           I 238 I 17
s Myotis_myotis.MyoMyo_scaffold_6123                        13751 2 +     66751 tt--
i Myotis_myotis.MyoMyo_scaffold_6123                    I 236 I 17
s Nannospalax_galili.KL201303.1                            120127 1 +    362372 G---
i Nannospalax_galili.KL201303.1                         I 12 I 7
s Neomonachus_schauinslandi.NINY01007774.1                4490089 4 -  14209539 TTTC
i Neomonachus_schauinslandi.NINY01007774.1              I 10 I 9
s Neophocaena_asiaeorientalis.KZ688543.1                  3954563 4 -   4490290 TTCT
i Neophocaena_asiaeorientalis.KZ688543.1                I 10 I 9
s Noctilio_leporinus.NocLep_scaffold_12062                  50291 2 +     94413 ct--
i Noctilio_leporinus.NocLep_scaffold_12062              I 77 I 17
s Nomascus_annamensis.k141_762468                               1 4 -      2755 TTCT
i Nomascus_annamensis.k141_762468                       n 69 C 0
s Nomascus_concolor.k141_70405                                622 4 +      1153 TTCT
i Nomascus_concolor.k141_70405                          C 0 C 0
s Nomascus_gabriellae.k141_1400361                            552 4 -      2203 TTCT
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_1022                             576 4 -     11638 TTCT
i Nomascus_siki_b.tarseq_1022                       C 0 C 0
s Nomascus_siki_a.k141_421408                                   466 4 +     16235 TTCT
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                37827 4 +   3668941 TTTC
i Nyctereutes_procyonoides.CAJHUB010000786.1            I 10 I 9
s Nycticebus_bengalensis.LG16                            65571584 4 -  95554990 TTCC
i Nycticebus_bengalensis.LG16                           I 10 I 9
s Nycticebus_coucang.k141_771591                            14993 4 +     16181 TTCC
i Nycticebus_coucang.k141_771591                        I 10 I 9
s Odobenus_rosmarus.KB229369.1                             684791 4 -   3126709 TTTC
i Odobenus_rosmarus.KB229369.1                          I 10 I 9
s Odocoileus_virginianus.KZ101650.1                       1083407 4 +   1425656 ATCC
i Odocoileus_virginianus.KZ101650.1                     I 10 I 9
s Okapia_johnstoni.LVCL01S0017931.1                         41490 4 +     78940 ATCC
i Okapia_johnstoni.LVCL01S0017931.1                     I 10 I 9
s Ondatra_zibethicus.OndZib_scaffold_6821                  130169 1 +    145789 G---
i Ondatra_zibethicus.OndZib_scaffold_6821               I 15 I 7
s Onychomys_torridus.OnyTor_scaffold_12578                  42860 1 +     62360 G---
i Onychomys_torridus.OnyTor_scaffold_12578              I 15 I 7
s Orcinus_orca.KB316965.1                                 7228239 4 -   7562323 TTCT
i Orcinus_orca.KB316965.1                               I 10 I 9
s Orycteropus_afer.OryAfe_flattened_line_13509              64020 4 -     66828 ATCC
i Orycteropus_afer.OryAfe_flattened_line_13509          I 10 I 9
s Oryctolagus_cuniculus.CM000803.1                      141883628 4 + 163896628 TTCC
i Oryctolagus_cuniculus.CM000803.1                      I 1540 I 9
s Otocyon_megalotis.JAEUCK010005121.1                      314965 4 -    505867 TTTC
i Otocyon_megalotis.JAEUCK010005121.1                   I 10 I 9
s Otolemur_crassicaudatus.k141_505435                        4933 4 -     53940 TTCT
i Otolemur_crassicaudatus.k141_505435                   I 10 I 9
s Otolemur_garnettii.GL873528.1                          18012906 4 -  38779656 TTCT
i Otolemur_garnettii.GL873528.1                         I 10 I 9
s Ovis_aries.CM001582.2                                 134082419 4 - 275406953 ATCC
i Ovis_aries.CM001582.2                                 I 10 I 9
s Ovis_canadensis.OviCan_scaffold_6251                      83647 4 +    140051 ATCC
i Ovis_canadensis.OviCan_scaffold_6251                  I 10 I 9
s Pan_paniscus.CM003386.1                               127578296 4 - 205426864 TTCC
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120155456 4 - 196562556 TTCC
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  39693 4 +    295523 TTTC
i Panthera_onca.PanOnc_flattened_line_1615              I 10 I 9
s Panthera_pardus.KV860323.1                              3643508 4 +  18214204 TTTC
i Panthera_pardus.KV860323.1                            I 10 I 9
s Panthera_tigris.KE721879.1                              5033156 4 -   6340057 TTTC
i Panthera_tigris.KE721879.1                            I 10 I 9
s Pantholops_hodgsonii.KE114631.1                         1071288 4 -   1292953 ATCC
i Pantholops_hodgsonii.KE114631.1                       I 10 I 9
s Papio_anubis.CM001492.2                               188160176 4 - 188283584 TTCC
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              3266 4 +     25005 TTCC
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47517548 4 +  47705337 TTCC
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 71539 4 -    104429 TTCC
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   10071 4 +     14967 TTCC
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 5936 4 -      7628 TTCC
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    121191 4 -    135482 TTTC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 I 10 I 9
s Perodicticus_ibeanus.k141_117958                          10603 4 -     23713 TTCC
i Perodicticus_ibeanus.k141_117958                      I 10 I 9
s Perodicticus_potto.k141_1136815                           11743 4 +     61070 TTCC
i Perodicticus_potto.k141_1136815                       I 10 I 9
s Perognathus_longimembris.PerPac_flattened_line_19359       2025 1 +     49596 T---
i Perognathus_longimembris.PerPac_flattened_line_19359  I 10 I 12
s Peromyscus_maniculatus.KI615518.1                       4955226 1 -   8017169 G---
i Peromyscus_maniculatus.KI615518.1                     I 15 I 7
s Petromus_typicus.PetTyp_scaffold_33007                    17083 1 -     36578 T---
i Petromus_typicus.PetTyp_scaffold_33007                I 16 I 7
s Phocoena_phocoena.PhoPho_flattened_line_53071              2704 4 +      8220 TTCT
i Phocoena_phocoena.PhoPho_flattened_line_53071         I 10 I 9
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            99289 2 +    112873 CT--
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        I 773 I 17
s Platanista_gangetica.PlaMin_flattened_line_72990           9175 4 +     21690 TTCT
i Platanista_gangetica.PlaMin_flattened_line_72990      I 10 I 9
s Plecturocebus_bernhardi.k141_959214                       25871 4 +     44506 TTCC
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        26084 4 +     67491 TTCC
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      16323 4 -     98129 TTCC
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     25924 4 +    147771 TTCC
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         2559 4 -     43940 TTCC
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          6642 4 -     55515 TTCC
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         25996 4 +    152463 TTCC
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       3804 4 -    119457 TTCC
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         15719 4 +    134592 TTCC
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          26306 4 -     75465 TTCC
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              190919 4 -    373494 TTCC
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19811566 4 +  19899266 TTCC
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                3722 4 -      9567 AACC
i Procavia_capensis.ProCapCap_scaffold_149274           I 10 I 9
s Prolemur_simus.MPIZ01000048.1                           6852529 4 +  12164890 TTCC
i Prolemur_simus.MPIZ01000048.1                         I 10 I 9
s Propithecus_coquerelli.NW_012147863.1                     21557 4 -     30946 TTCC
i Propithecus_coquerelli.NW_012147863.1                 I 9 I 9
s Propithecus_coronatus.k141_1353159                         7613 4 +     11805 TTCC
i Propithecus_coronatus.k141_1353159                    I 9 I 9
s Propithecus_diadema.k141_577245                           46961 4 +     52369 TTCC
i Propithecus_diadema.k141_577245                       I 9 I 9
s Propithecus_edwardsi.k141_1317105                         39348 4 -     44753 TTCC
i Propithecus_edwardsi.k141_1317105                     I 9 I 9
s Propithecus_perrieri.k141_7554                            21271 4 +     27322 TTCC
i Propithecus_perrieri.k141_7554                        I 9 I 9
s Propithecus_tattersalli.k141_907138                       20905 4 -     53241 TTCC
i Propithecus_tattersalli.k141_907138                   I 9 I 9
s Propithecus_verreauxi.k141_158021                         43169 4 -     48185 TTCC
i Propithecus_verreauxi.k141_158021                     I 9 I 9
s Psammomys_obesus.NESX01026517.1                           38021 1 +     77221 C---
i Psammomys_obesus.NESX01026517.1                       I 15 I 7
s Pteronotus_parnellii.KE867983.1                            5840 2 -     27784 CT--
i Pteronotus_parnellii.KE867983.1                       I 252 I 17
s Pteronura_brasiliensis.PteBra_flattened_line_1343        250081 4 -    344369 TTTC
i Pteronura_brasiliensis.PteBra_flattened_line_1343     I 10 I 9
s Puma_concolor.QAVW01000427.1                          131539804 4 - 161321710 TTTC
i Puma_concolor.QAVW01000427.1                          I 10 I 9
s Rangifer_tarandus.RanTarSib_scaffold_24239                20271 4 +     68503 ATCC
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 10 I 9
s Rattus_norvegicus.chr11                                13917427 1 +  90463843 G---
i Rattus_norvegicus.chr11                               I 15 I 7
s Rhinolophus_sinicus.LVEH01000179.1                      1792382 4 +   2252614 TTCC
i Rhinolophus_sinicus.LVEH01000179.1                    I 10 I 9
s Saiga_tatarica.SaiTat_scaffold_371890                       681 4 -      4338 TTAC
i Saiga_tatarica.SaiTat_scaffold_371890                 I 10 I 9
s Saimiri_boliviensis.NW_024100938.1                     15676328 4 -  43202129 ttcc
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        8241 4 +     34089 TTCC
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              8181 4 -     60842 TTCC
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              8275 4 +     67014 TTCC
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              8252 4 +     60816 TTCC
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 8189 4 -     76454 TTCC
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17344976 4 -  30362882 TTCC
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         24297 4 -     62485 TTCC
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   39413 4 -    114521 TTCT
i Scalopus_aquaticus.ScaAqu_scaffold_9300               I 10 I 9
s Sigmodon_hispidus.SigHis_scaffold_11332                  104789 1 -    120886 G---
i Sigmodon_hispidus.SigHis_scaffold_11332               I 15 I 7
s Solenodon_paradoxus.SolPar_flattened_line_1012            23340 3 +    739146 TTC-
i Solenodon_paradoxus.SolPar_flattened_line_1012        I 10 I 9
s Sorex_araneus.JH798170.1                               17769799 3 -  27805282 TTC-
i Sorex_araneus.JH798170.1                              I 7 I 6
s Spermophilus_dauricus.KZ294190.1                        2243830 1 +   2842873 T---
i Spermophilus_dauricus.KZ294190.1                      I 10 I 12
s Spilogale_gracilis.SpiGra_flattened_line_905             238600 4 -    276980 TTTC
i Spilogale_gracilis.SpiGra_flattened_line_905          I 10 I 9
s Suricata_suricatta.SurSur_flattened_line_20339            33011 4 +     62062 TTTC
i Suricata_suricatta.SurSur_flattened_line_20339        I 10 I 9
s Sus_scrofa.CM000824.4                                 189274780 4 + 218635234 TTCT
i Sus_scrofa.CM000824.4                                 I 10 I 9
s Symphalangus_syndactylus.tarseq_24                        18589 4 -  13920577 TTCT
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                2064 2 +     20549 ct--
i Tadarida_brasiliensis.TadBra_scaffold_61492           I 242 I 17
s Tapirus_indicus.TapInd_scaffold_176                      810566 4 +   1148477 TTCC
i Tapirus_indicus.TapInd_scaffold_176                   I 10 I 9
s Tapirus_terrestris.TapTer_scaffold_14939                  61208 4 +     99546 TTCC
i Tapirus_terrestris.TapTer_scaffold_14939              I 10 I 9
s Tarsius_lariang.k141_609102                               31153 4 +     42269 TTCC
i Tarsius_lariang.k141_609102                           I 10 I 9
s Tarsius_wallacei.k141_48636                               64462 4 +     65473 TTCC
i Tarsius_wallacei.k141_48636                           I 10 I 9
s Theropithecus_gelada.CM009951.1                       194011709 4 - 194193292 TTCC
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  137838 2 -    259118 ct--
i Tonatia_saurophila.TonSau_scaffold_3334               I 275 I 17
s Tragulus_javanicus.TraJav_scaffold_14717                   9303 4 +     90398 TTCC
i Tragulus_javanicus.TraJav_scaffold_14717              I 10 I 9
s Trichechus_manatus.JH594618.1                          16089615 4 +  31416278 ATCC
i Trichechus_manatus.JH594618.1                         I 10 I 9
s Tupaia_chinensis.KB320831.1                             2797536 4 -   3938065 TTCC
i Tupaia_chinensis.KB320831.1                           I 10 I 9
s Tupaia_tana.TupTan_flattened_line_68454                    9465 4 +     13056 TTCC
i Tupaia_tana.TupTan_flattened_line_68454               I 10 I 9
s Tursiops_truncatus.MRVK01000923.1                      69316968 4 -  96451834 TTCT
i Tursiops_truncatus.MRVK01000923.1                     I 10 I 9
s Uropsilus_gracilis.UroGra_scaffold_69449                   9939 4 +     10241 TTCA
i Uropsilus_gracilis.UroGra_scaffold_69449              I 10 I 9
s Ursus_maritimus.KK498671.1                              6520265 4 +  28682327 TTTC
i Ursus_maritimus.KK498671.1                            I 10 I 9
s Varecia_rubra.k141_432109                                  9171 4 -     20643 TTCC
i Varecia_rubra.k141_432109                             I 10 I 9
s Varecia_variegata.k141_775891                             28706 4 -     33872 TTCC
i Varecia_variegata.k141_775891                         I 10 I 9
s Vicugna_pacos.KN269600.1                                1528001 4 -   2331223 TTCC
i Vicugna_pacos.KN269600.1                              I 10 I 9
s Vulpes_lagopus.VulLag_flattened_line_2045                144192 4 -    281493 TTTC
i Vulpes_lagopus.VulLag_flattened_line_2045             I 10 I 9
s Xerus_inauris.XerIna_scaffold_7898                       131326 1 -    134049 T---
i Xerus_inauris.XerIna_scaffold_7898                    I 10 I 12
s Zalophus_californianus.ZalCal_flattened_line_4097        219647 4 -    227762 TTTC
i Zalophus_californianus.ZalCal_flattened_line_4097     I 10 I 9
s Zapus_hudsonius.ZapHud_scaffold_256618                      269 1 -      2259 G---
i Zapus_hudsonius.ZapHud_scaffold_256618                I 13 I 7
s Ziphius_cavirostris.ZipCav_flattened_line_60625            1712 4 -     13665 TTCT
i Ziphius_cavirostris.ZipCav_flattened_line_60625       I 10 I 9
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Dinomys_branickii.DinBra_scaffold_1996                   158442 1030 +    228994 I
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           4051 456 -      6963 I
e Ochotona_princeps.JH802095.1                            4999348 675 -  23139505 I
e Tamandua_tetradactyla.TamTet_scaffold_26877               16259 379 +     45698 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             6589 379 -      8794 I
e Kogia_breviceps.KogBre_flattened_line_35920               27132 184 +     37189 I
e Hyaena_hyaena.HyaHya_flattened_line_20729                 22998 0 -     67322 C
e Elephantulus_edwardii.JH947210.1                        7830035 1277 +  15467074 I
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Echinops_telfairi.JH980316.1                           22999931 2 -  44670279 I
e Dasypus_novemcinctus.JH568778.1                          185121 383 -   6883506 I
e Choloepus_hoffmanni.KN194586.1                           763329 503 +    964067 I
e Choloepus_didactylus.ChoDid_scaffold_36182                18024 504 -     21363 I
e Trachypithecus_pileatus.k141_1022309                       5226 0 +     13828 C
e Trachypithecus_phayrei.ctg3                            44662914 0 -  44834318 C
e Trachypithecus_obscurus.k141_1115109                       8130 0 -     28054 C
e Trachypithecus_melamera.k141_699241                        2986 0 -     24393 C
e Trachypithecus_leucocephalus.k141_381681                   3005 0 +     12481 C
e Trachypithecus_laotum.k141_760702                          4719 0 +     14371 C
e Trachypithecus_hatinhensis.k141_504423                     6067 0 -     15592 C
e Trachypithecus_germaini.k141_868450                        3883 0 -     11566 C
e Trachypithecus_geei.k141_670367                           46082 0 -     54611 C
e Trachypithecus_francoisi.k141_768164                       4689 0 -     14244 C
e Trachypithecus_cristatus.k141_1011511                      5261 0 -     12939 C
e Trachypithecus_crepusculus.k141_1588528                   23360 0 -     32910 C
e Trachypithecus_auratus.k141_738098                        29800 0 +     38948 C
e Semnopithecus_vetulus.k141_1143185                        16479 0 +     30600 C
e Semnopithecus_schistaceus.k141_387461                     33457 0 +     42640 C
e Semnopithecus_priam.k141_410937                           40312 0 +     46263 C
e Semnopithecus_johnii.k141_785014                         121532 0 +    130994 C
e Semnopithecus_hypoleucos.k141_761524                      11528 0 +     20762 C
e Semnopithecus_entellus.k141_1572367                        6153 0 +     15331 C
e Rhinopithecus_strykeri.ctg4                            44859307 0 -  45163003 C
e Rhinopithecus_bieti.k119_554384                            2917 0 -     17045 C
e Pygathrix_nigripes_a.k141_101123                             8537 0 +     18040 C
e Pygathrix_nigripes_b.ctg79                                 6809148 0 +   6970761 C
e Pygathrix_cinerea.k141_374971                             32651 0 +     56732 C
e Presbytis_mitrata.k141_860013                              8661 0 +     14865 C
e Presbytis_comata.k141_672698                               8546 0 -     15069 C
e Pithecia_vanzolinii.k141_831006                           15424 0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514 0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521 0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292 0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093 0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038 0 +     78826 C
e Pithecia_albicans.k141_991845                             45662 0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000036.1               26743271 0 +  26888534 C
e Piliocolobus_kirkii.k141_929665                            4788 0 +      7694 C
e Piliocolobus_gordonorum.k141_1270531                       5421 0 -     17985 C
e Piliocolobus_badius.k141_1987485                           4802 0 -      5908 C
e Octodon_degus.JH651621.1                                3687420 1881 +  10294119 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65679784 9 +  89412551 I
e Nasalis_larvatus.k141_153429                              11264 0 +     48152 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     91920 1922 -    117718 I
e Muscardinus_avellanarius.MusAve_scaffold_9643             14637 1 +     98495 I
e Hystrix_cristata.HysCri_scaffold_50788                     7688 1865 +     22540 I
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 32592 1717 -     67205 I
e Colobus_polykomos.k141_1406057                            19335 0 +     23629 C
e Colobus_guereza.LG08                                  147667351 0 + 156195979 C
e Colobus_angolensis.KN985967.1                          10889423 0 +  10971483 C
e Chinchilla_lanigera.JH721867.1                         15963245 964 +  43084221 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               17317 8 +    209709 CATAAA-TG
s Acinonyx_jubatus.LLWD01000356.1                         2039292 8 +   3721120 CAGAAA-TG
i Acinonyx_jubatus.LLWD01000356.1                       I 9 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    117539 8 -    189883 TAAAAA-CA
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 7 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10662984 8 +  23371972 CAGAAA-TG
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 9 C 0
s Ailurus_fulgens.LNAC01000003.1                          7099772 8 -  16596857 CAGAAA-TG
i Ailurus_fulgens.LNAC01000003.1                        I 9 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   21499 7 -     22067 TAGAAA--G
i Allactaga_bullata.AllBul_scaffold_70162               I 7 I 1
s Allenopithecus_nigroviridis.k141_2469532                   5189 8 -     60446 CATAAA-TG
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         5906 8 -     29318 CATAAA-TG
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         4844 8 +     38766 CATAAA-TG
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          5800 8 -     80423 CATAAA-TG
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                               772 8 +     19852 CATAAA-TG
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                3028 8 -     12443 CATAAA-TG
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                              327 8 +      5070 CATAAA-TG
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                   72 8 -      1641 CATAAA-TG
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          2811 8 -     24210 CATAAA-TG
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           29393 8 -     30219 CATAAA-TG
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_405616                              5229 8 +     16794 CATAAA-TG
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                             361 8 -      1470 CATAAA-TG
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             4506 8 -      9835 CATAAA-TG
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3525292 8 +   4113121 CAGAAG-TA
i Ammotragus_lervia.NIVO01013474.1                      I 9 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      392296 4 -    631301 ----tc-tg
i Anoura_caudifer.AnoCau_scaffold_422                   I 17 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             2723 8 +     55446 CACAAG-TA
i Antilocapra_americana.AntAmePen_scaffold_27338        I 9 C 0
s Aotus_azarae.k141_3170768                                 66119 8 +     78111 TATAAA-TG
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            9065 8 +     22701 TATAAA-TG
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5753023 8 +   9889416 tataaa-tg
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             9621 8 -    104377 TATAAA-TG
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               9628 8 +     23246 TATAAA-TG
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     2159 8 +     11424 TAGAAA-CG
i Aplodontia_rufa.AprRuf_scaffold_101456                I 12 C 0
s Arctocebus_calabarensis.k141_587554                        6245 8 +      9265 CATAAA-TA
i Arctocebus_calabarensis.k141_587554                   I 9 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                10720 4 -     29036 ----tc-tg
i Artibeus_jamaicensis.ArtJam_scaffold_41619            I 17 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9542914 8 +  39197703 CATAAA-TG
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             64187 8 +     85812 CATAAA-TG
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                15200 8 +     89302 CATAAA-TG
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             19701 8 -     58268 CATAAA-TG
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             67695 8 +    119057 CATAAA-TG
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               9664 8 -     25888 CATAAA-TG
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                10720 8 -     16375 CACAGA-CG
i Avahi_laniger.k141_2840928                            I 9 C 0
s Avahi_peyrierasi.k141_798820                               4336 8 +      6337 CACAGA-CG
i Avahi_peyrierasi.k141_798820                          I 9 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26383767 8 +  51448160 CAGAAG-TG
i Balaenoptera_acutorostrata.KI537095.1                 I 9 C 0
s Balaenoptera_bonaerensis.DF502048.1                        8940 8 -     13118 CAGAAG-TG
i Balaenoptera_bonaerensis.DF502048.1                   I 9 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   47754 8 -     72089 CAGAAG-TA
i Beatragus_hunteri.BeaHun_scaffold_21644               I 9 C 0
s Bison_bison.KN264915.1                                   301898 8 -   6870073 CAGAAg-ta
i Bison_bison.KN264915.1                                I 9 C 0
s Bos_indicus.CM003021.1                                 22955996 8 + 161108492 CAGAAg-ta
i Bos_indicus.CM003021.1                                I 9 C 0
s Bos_mutus.JH883513.1                                     418261 8 +    998990 CAGAAg-ta
i Bos_mutus.JH883513.1                                  I 9 C 0
s Bos_taurus.CM000177.6                                  22664650 8 + 158972876 CAGAAg-ta
i Bos_taurus.CM000177.6                                 I 9 C 0
s Bubalus_bubalis.KI419065.1                               674413 8 +   1914593 CAGAAg-ta
i Bubalus_bubalis.KI419065.1                            I 9 C 0
s Cacajao_ayresi.k141_724503                               117566 8 -    171031 CATAAA-TG
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 16586 8 +    125063 CATAAA-TG
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                18633 8 -    216513 CATAAA-TG
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       11176 8 -    134917 CATAAA-TG
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3222904 8 -   8989139 CAGAAA-TG
i Camelus_bactrianus.KN276303.1                         I 9 C 0
s Camelus_dromedarius.KN271192.1                           400606 8 -  15254737 CAGAAA-TG
i Camelus_dromedarius.KN271192.1                        I 9 C 0
s Camelus_ferus.KB016973.1                                2976342 8 +   6889770 CAGAAA-TG
i Camelus_ferus.KB016973.1                              I 9 C 0
s CanFam4.chr31                                          11526125 8 +  39901454 CAGAAA-TA
i CanFam4.chr31                                         I 9 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   21099 8 +     87036 CAGAAA-TA
i Canis_lupus_VD.CanFam_VD_scaffold_16982               I 9 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11272808 8 -  35597290 CAGAAA-TA
i Canis_lupus_dingo.QKWQ01001993.1                      I 9 C 0
s Canis_lupus_familiaris.chr31                           11095519 8 +  39895921 CAGAAA-TA
i Canis_lupus_familiaris.chr31                          I 9 C 0
s Canis_lupus_orion.HG994411.1                           16462304 8 -  44759192 CAGAAA-TA
i Canis_lupus_orion.HG994411.1                          I 9 C 0
s Capra_aegagrus.CM003214.1                              21330372 8 + 157394656 CAGAAG-TA
i Capra_aegagrus.CM003214.1                             I 9 C 0
s Capra_hircus.CM004562.1                               135711589 8 - 157403528 CAGAAG-TA
i Capra_hircus.CM004562.1                               I 9 C 0
s Carlito_syrichta.NW_007248099.1                          313309 8 +    345090 TATAAA-TG
i Carlito_syrichta.NW_007248099.1                       I 9 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               61506 4 +     67245 ----tc-tg
i Carollia_perspicillata.CarPer_scaffold_4436           I 17 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   162436 7 -    276539 -CTAAG-TA
i Catagonus_wagneri.CatWag_scaffold_1305                I 6 C 0
s Cavia_aperea.AVPZ01000278.1                            15789440 8 -  24422027 TAGAAA-TG
i Cavia_aperea.AVPZ01000278.1                           I 7 C 0
s Cavia_porcellus.DS562889.1                             15801379 8 -  24440124 TAGAAA-TG
i Cavia_porcellus.DS562889.1                            I 7 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       179551 8 +    436027 TAGAAA-TG
i Cavia_tschudii.CavTsc_scaffold_488                    I 7 C 0
s Cebus_albifrons.Contig22                               18894399 8 -  29618158 CATAAA-TG
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                11943 8 -     26817 CATAAA-TG
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                16187 8 +     25043 CATAAA-TG
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                        12313 8 +     21754 TATAAA-TG
i Cephalopachus_bancanus.k141_702587                    I 9 C 0
s Ceratotherium_simum.JH767818.1                          4367342 8 +   7569818 CGGAAA-TG
i Ceratotherium_simum.JH767818.1                        I 9 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         7099 8 -      9338 CGGAAA-TG
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    I 9 C 0
s Cercocebus_atys.KQ010443.1                              6559130 8 +   6739814 CATAAA-TG
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      30607 8 +     60454 CATAAA-TG
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          5811 8 -     21101 CATAAA-TG
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         63121 8 -    107033 CATAAA-TG
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        5984 8 -     17608 CATAAA-TG
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          3149 8 +     45019 CATAAA-TG
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           3209 8 +     15177 CATAAA-TG
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          6031 8 +     16677 CATAAA-TG
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           28221 8 +     35983 CATAAA-TG
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11994752 8 +  12117833 CATAAA-TG
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46481513 8 +  46592721 CATAAA-TG
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      45062 8 -     45581 CATAAA-TG
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       6045 8 +     35577 CATAAA-TG
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        5839 8 -     25661 CATAAA-TG
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        5796 8 -     17744 CATAAA-TG
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        25380 8 +     37128 CATAAA-TG
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           62944 8 -     68416 CACAAA-TG
i Cheirogaleus_major.k141_1157592                       I 4 C 0
s Cheirogaleus_medius.k141_133808                           12050 8 +     13308 CACAAA-TG
i Cheirogaleus_medius.k141_133808                       I 9 C 0
s Cheracebus_lucifer.k141_619653                             9226 8 -     18223 CATAAA-TG
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                               965 8 +    188999 CATAAA-TG
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           45263 8 +     57117 CATAAA-TG
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          49943 8 +     54541 CATAAA-TG
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chiropotes_israelita.k141_1189915                         74745 8 +    196370 CATAAA-TG
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          18926 8 +     40510 CATAAA-TG
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15143565 8 -  15256731 CATAAA-TG
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      38029 8 -     53260 CATAAA-TG
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101148588 8 + 101219884 CATAAA-TG
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_629495              1993 8 -      3120 TATAAC-AG
i Chrysochloris_asiatica.ChrAsi_scaffold_629495         I 9 C 0
s Condylura_cristata.JH655880.1                          60621964 8 +  78930452 CAGAAa-tg
i Condylura_cristata.JH655880.1                         I 9 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         1979 8 -      5782 CAGAAA-TA
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    I 9 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 282411 8 -    399297 TAGAAA-TG
i Cricetomys_gambianus.CriGam_scaffold_949              I 7 C 0
s Cricetulus_griseus.LT883672.1                          53034776 8 +  72327488 TAAACC-AG
i Cricetulus_griseus.LT883672.1                         I 7 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              1390 8 -     22648 TCAATA-TG
i Crocidura_indochinensis.CroInd_scaffold_27484         I 16 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            57286 8 -     70449 TAGAAA-TG
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 9 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  213766 8 -    956709 TAGAAA-TT
i Ctenodactylus_gundi.CteGun_scaffold_447               I 7 I 397
s Cuniculus_paca.CunPac_flattened_line_16637                20612 8 +     26546 TAGAAA-TG
i Cuniculus_paca.CunPac_flattened_line_16637            I 7 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             61752 8 -    236241 TAGAAA-TG
i Dasyprocta_punctata.DasPun_flattened_line_634         I 7 C 0
s Daubentonia_madagascariensis.ctg11                     16848879 8 +  31942871 CATAAA-TG
i Daubentonia_madagascariensis.ctg11                    I 9 C 0
s Delphinapterus_leucas.KZ290064.1                       80040392 8 -  96802777 CAGAAG-TG
i Delphinapterus_leucas.KZ290064.1                      I 9 C 0
s Desmodus_rotundus.KZ672188.1                           18700927 4 -  18957592 ----TC-TG
i Desmodus_rotundus.KZ672188.1                          I 146 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 325989 8 +    993696 TGGAAA-TG
i Dicerorhinus_sumatrensis.PEKH010003161.1              I 9 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   6630 8 +    151128 CGGAAA-TG
i Diceros_bicornis.DicBicMic_scaffold_9545              I 9 C 0
s Dipodomys_ordii.KN672545.1                              3659947 8 +   4240102 CAGAAA-TG
i Dipodomys_ordii.KN672545.1                            I 12 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  2295 8 -     11986 CAGAAA-TG
i Dipodomys_stephensi.DipSte_scaffold_84338             I 12 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                39719 8 -     73477 TAGAAT-TG
i Dolichotis_patagonum.DolPat_scaffold_14102            I 7 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1495970 8 +   1727528 CAGAAg-ta
i Elaphurus_davidianus.JRFZ01086400.1                   I 9 C 0
s Ellobius_lutescens.LOEQ01003611.1                        243577 8 -    369425 TAAAGC-TA
i Ellobius_lutescens.LOEQ01003611.1                     I 7 C 0
s Ellobius_talpinus.LOJH01198462.1                           1319 8 -      1901 TAAAGC-TG
i Ellobius_talpinus.LOJH01198462.1                      I 7 C 0
s Enhydra_lutris.KZ291749.1                              85877243 8 +  99434291 CAGAAA-CA
i Enhydra_lutris.KZ291749.1                             I 9 C 0
s Eptesicus_fuscus.JH977687.1                             4708685 4 +   6522550 ----TC-TG
i Eptesicus_fuscus.JH977687.1                           I 17 C 0
s Equus_asinus.JREZ01000062.1                             5856355 8 -   7175178 CAGaaa-tg
i Equus_asinus.JREZ01000062.1                           I 9 C 0
s Equus_caballus.CM000402.2                              13354855 8 +  41866177 CAGAaa-tg
i Equus_caballus.CM000402.2                             I 9 C 0
s Equus_przewalskii.ATBW01073585.1                          16345 8 +     92910 CAGAaa-tg
i Equus_przewalskii.ATBW01073585.1                      I 9 C 0
s Erinaceus_europaeus.JH835290.1                         11540807 8 +  16010500 TCAAAG-TG
i Erinaceus_europaeus.JH835290.1                        I 9 C 0
s Erythrocebus_patas.Contig8                             48780598 8 -  48907691 CATAAA-TG
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          318610 8 +    330699 CAGAAG-TG
i Eschrichtius_robustus.EscRob_flattened_line_685       I 9 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             65067 8 +     89355 CAGAAG-TG
i Eubalaena_japonica.EubJap_flattened_line_7756         I 9 C 0
s Eulemur_albifrons.k141_715837                              9032 8 +     13586 CATAAA-TG
i Eulemur_albifrons.k141_715837                         I 9 C 0
s Eulemur_collaris.k141_1015201                              2295 8 -      4292 CATAAA-CG
i Eulemur_collaris.k141_1015201                         I 9 C 0
s Eulemur_coronatus.k141_3240342                            15428 8 +     36558 CATAAA-TG
i Eulemur_coronatus.k141_3240342                        I 9 C 0
s Eulemur_flavifrons.k141_903901                            11753 8 +     60246 CATAAA-TG
i Eulemur_flavifrons.k141_903901                        I 9 C 0
s Eulemur_fulvus.k141_653297                                15236 8 +    109717 CATAAA-TG
i Eulemur_fulvus.k141_653297                            I 9 C 0
s Eulemur_macaco.k141_747087                                 3221 8 -     19505 CATAAA-TG
i Eulemur_macaco.k141_747087                            I 9 C 0
s Eulemur_mongoz.k141_825972                                19893 8 +     27497 CATAAA-TG
i Eulemur_mongoz.k141_825972                            I 9 C 0
s Eulemur_rubriventer.k141_411740                           22349 8 +     26808 CATAAA-TG
i Eulemur_rubriventer.k141_411740                       I 9 C 0
s Eulemur_rufus.k141_1620292                                37084 8 +     46535 CATAAA-CG
i Eulemur_rufus.k141_1620292                            I 9 C 0
s Eulemur_sanfordi.k141_186399                              19823 8 -     29447 CATAAA-TG
i Eulemur_sanfordi.k141_186399                          I 9 C 0
s Felis_catus.AANG03133801.1                                  338 8 -       736 CAGAAA-TG
i Felis_catus.AANG03133801.1                            I 9 C 0
s Felis_catus_fca126.CM031420.1                         129285687 8 - 158578461 CAGAAA-TG
i Felis_catus_fca126.CM031420.1                         I 9 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 26786 8 +     52776 CAGAAA-TG
i Felis_nigripes.FelNig_flattened_line_8080             I 9 C 0
s Fukomys_damarensis.KN123630.1                          13895901 8 -  19261668 TAGAAA-TG
i Fukomys_damarensis.KN123630.1                         I 7 C 0
s Galago_moholi.ctg555                                     215086 8 -    847004 CATAGA-TA
i Galago_moholi.ctg555                                  I 9 C 0
s Galago_senegalensis.k141_964197                           17447 8 -     43889 CATAGA-TA
i Galago_senegalensis.k141_964197                       I 9 C 0
s Galagoides_demidoff.k141_1769638                          14590 8 +     27357 CATAAA-TA
i Galagoides_demidoff.k141_1769638                      I 9 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               159330 9 +    324696 CAGAAAATG
i Galeopterus_variegatus.GalVar_scaffold_354            I 9 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    185768 8 -    189561 CAGAAg-ta
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 9 C 0
s Glis_glis.GliGli_scaffold_79770                           16223 8 -     18683 TAGAAA-TG
i Glis_glis.GliGli_scaffold_79770                       I 12 C 0
s Gorilla_beringei.k141_111300                               9021 8 -     14630 CATAAA-TG
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119656121 8 - 195582420 CATAAA-TG
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   79568 8 +    118900 TAGAAA-TG
i Graphiurus_murinus.GraMur_scaffold_4493               I 12 C 0
s Hapalemur_alaotrensis.k141_1280836                         5816 8 +     10286 CATAAA-TG
i Hapalemur_alaotrensis.k141_1280836                    I 9 C 0
s Hapalemur_gilberti.k141_279011                             4294 8 -     11661 CATAAA-CG
i Hapalemur_gilberti.k141_279011                        I 9 C 0
s Hapalemur_griseus.k141_1387522                             9621 8 +     56096 CATAAA-TG
i Hapalemur_griseus.k141_1387522                        I 9 C 0
s Hapalemur_meridionalis.k141_186231                        32870 8 -     42470 CATAAA-TG
i Hapalemur_meridionalis.k141_186231                    I 9 C 0
s Hapalemur_occidentalis.k141_797938                        49496 8 -     54384 CATAAA-TG
i Hapalemur_occidentalis.k141_797938                    I 9 C 0
s Helogale_parvula.HelPar_flattened_line_22962              22427 8 +     53719 TAGAAA-TG
i Helogale_parvula.HelPar_flattened_line_22962          I 9 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                32639 8 -     91191 CAGAAG-TA
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 6 C 0
s Heterocephalus_glaber.JH602058.1                        2560418 8 +  31725842 TGGAAA-TG
i Heterocephalus_glaber.JH602058.1                      I 7 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               62629 8 +     73687 CAGAAA-CG
i Heterohyrax_brucei.HetBruBak_scaffold_25354           I 9 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              150390 8 +    277961 CAGAAG-TG
i Hippopotamus_amphibius.HipAmp_scaffold_1308           I 9 C 0
s Hipposideros_armiger.JXIK01001085.1                      282795 8 -    477199 CAGgtg-tg
i Hipposideros_armiger.JXIK01001085.1                   I 9 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959                564 8 +     26078 CAGGTG-TG
i Hipposideros_galeritus.HipGal_scaffold_52959          I 9 C 0
s Hoolock_leuconedys.ctg315                                   350019 8 +    431944 CATAAA-TG
i Hoolock_leuconedys.ctg315                                C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           21007 8 -    119109 TAGAAA-TG
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       I 7 C 0
s Hylobates_abbotti.k141_1816750                             1500 8 +      3202 CATAAA-CG
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1633646                              1470 8 -      2102 CATAAA-CG
i Hylobates_agilis.k141_1633646                         C 0 C 0
s Hylobates_klossii.k141_468230                              2987 8 +      5464 CATAAA-TG
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14628335 8 -  25970782 CATAAA-TG
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                             886 8 +      4161 CATAAA-CG
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             36443 8 -     60944 CATAAA-TG
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7130138 8 +  13083262 TAGAAA-TG
i Ictidomys_tridecemlineatus.JH393315.1                 I 12 C 0
s Indri_indri.k141_2197838                                   1293 8 +      3484 CATAGA-TG
i Indri_indri.k141_2197838                              I 9 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              12604 8 +     17520 CAGAAG-TG
i Inia_geoffrensis.IniGeo_flattened_line_66725          I 9 C 0
s Jaculus_jaculus.JH725517.1                              8577192 7 +  11848649 TAGAAA--G
i Jaculus_jaculus.JH725517.1                            I 7 I 1
s Lagothrix_lagothricha.k141_12968                          53783 8 -    147782 CATAAA-TG
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    5302 4 +     26176 ----tc-tg
i Lasiurus_borealis.LasBor_scaffold_59542               I 17 C 0
s Lemur_catta.scaffold_1                                258411168 8 - 285822530 CATAAA-TG
i Lemur_catta.scaffold_1                                I 9 C 0
s Lepilemur_ankaranensis.k141_884009                        28471 8 +     39228 TATAAA-TG
i Lepilemur_ankaranensis.k141_884009                    I 9 C 0
s Lepilemur_dorsalis.k141_134267                            57835 8 +     63517 TATAAA-TG
i Lepilemur_dorsalis.k141_134267                        I 9 C 0
s Lepilemur_ruficaudatus.k141_574529                        36215 8 -     38897 TATAAA-TG
i Lepilemur_ruficaudatus.k141_574529                    I 9 C 0
s Lepilemur_septentrionalis.k141_710646                      2261 8 -     13103 TATAAA-TG
i Lepilemur_septentrionalis.k141_710646                 I 9 C 0
s Leptonychotes_weddellii.KB714749.1                      3091207 8 -   3498232 CAGAAA-TG
i Leptonychotes_weddellii.KB714749.1                    I 9 C 0
s Lepus_americanus.LepAme_scaffold_62849                    20625 8 +     22452 CAGAAG-TG
i Lepus_americanus.LepAme_scaffold_62849                I 9 C 0
s Lipotes_vexillifer.KE558548.1                            139538 8 +   3060487 CAGAAG-TG
i Lipotes_vexillifer.KE558548.1                         I 9 C 0
s Lophocebus_aterrimus.ctg55                             19252218 8 +  19376315 CATAAA-TG
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           15034 8 +     84689 CATAAA-CA
i Loris_lydekkerianus.k141_550999                       I 9 C 0
s Loris_tardigradus.ctg97                                 3782773 8 +   6799190 CATAAA-CA
i Loris_tardigradus.ctg97                               I 9 C 0
s Loxodonta_africana.GL010040.1                          20598554 8 -  62548349 CAGAAA-TG
i Loxodonta_africana.GL010040.1                         I 9 C 0
s Lycaon_pictus.CM007556.1                               11094975 8 +  39895028 CAGAAA-TA
i Lycaon_pictus.CM007556.1                              I 9 C 0
s Macaca_arctoides.k141_2201161                             23969 8 +     74745 CATAAA-TG
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12710430 8 +  12821369 CATAAA-TG
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                3004 8 -     26467 CATAAA-TG
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           50875 8 +     63263 CATAAA-TG
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 2985 8 -     26361 CATAAA-TG
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 6175 8 -      7381 CATAAA-TG
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  49404 8 -     79256 CATAAA-TG
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196039502 8 + 196197964 CATAAA-TG
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11449672 8 +  11645122 CATAAA-TG
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   8358 8 -     46448 CATAAA-TG
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                6020 8 -     13212 CATAAA-TG
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 19701 8 -     55006 CATAAA-TG
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43844816 8 +  43892939 CATAAA-TG
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               20984 8 -     24607 CATAAA-TG
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               8355 8 -     27140 CATAAA-TG
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43441391 8 -  43563597 CATAAA-GG
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4454195 8 -   4543643 CATAAA-GG
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            151975 8 +    252755 CAGAAA-TG
i Manis_javanica.JSZB01003966.1                         I 9 C 0
s Manis_pentadactyla.KN017078.1                             39564 8 +     58827 CAGAAA-TG
i Manis_pentadactyla.KN017078.1                         I 9 C 0
s Marmota_marmota.CZRN01000005.1                         36878007 8 +  64221397 TAGAAA-TG
i Marmota_marmota.CZRN01000005.1                        I 12 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       65201 8 -    234502 CCGAAA-TG
i Megaderma_lyra.MegLyr_scaffold_3562                   I 9 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             6126 8 -     87323 TAGAAA-TG
i Mellivora_capensis.MelCap_flattened_line_15433        I 9 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 1032 8 +    115071 CACAAA-TG
i Meriones_unguiculatus.MerUng_scaffold_9483            I 7 C 0
s Mesocricetus_auratus.KB708139.1                         1051299 8 -  26018355 TAAAAC-TG
i Mesocricetus_auratus.KB708139.1                       I 7 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    2193 8 -     12939 TGGAAG-TG
i Mesoplodon_bidens.MesBid_scaffold_96348               I 9 C 0
s Microcebus_murinus.CM007691.1                          16514231 8 +  47401472 CATAAA-TG
i Microcebus_murinus.CM007691.1                         I 9 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  41250 8 -     48017 CAGAAC-TG
i Microgale_talazaci.MicTal_scaffold_34660              I 9 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               24680 4 -     32043 ----tc-tg
i Micronycteris_hirsuta.MicHir_scaffold_37978           I 17 C 0
s Microtus_ochrogaster.CM001673.1                        22823986 8 -  98408828 TAAAGC-TG
i Microtus_ochrogaster.CM001673.1                       I 7 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8212745 4 +  10048721 ----tc-tg
i Miniopterus_natalensis.LDJU01000022.1                 I 21 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            37235 4 +     45743 ----tc-tg
i Miniopterus_schreibersii.MinSch_scaffold_24116        I 21 C 0
s Miopithecus_ogouensis.k141_2935907                         5937 8 +     29742 CATAAA-TG
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        16703 8 -    104932 CAGAAA-TG
i Mirounga_angustirostris.MirAng_flattened_line_8852    I 9 C 0
s Mirza_zaza.k141_593947                                     4911 8 -     12809 CATAAA-TG
i Mirza_zaza.k141_593947                                I 9 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 149985 8 +    154973 CAGAAG-TG
i Monodon_monoceros.MonMon_M_scaffold_5598              I 9 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                163215 4 +    265003 ----tc-tg
i Mormoops_blainvillei.MorMeg_scaffold_2952             I 17 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  5988 8 -     19904 CAGAAG-TA
i Moschus_moschiferus.MosMos_scaffold_78805             I 9 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  150108 8 -    168139 TAGAAA-TG
i Mungos_mungo.MunMun_flattened_line_8729               I 9 C 0
s Murina_feae.MurFea_scaffold_2254                          24155 4 -    100666 ----tc-tg
i Murina_feae.MurFea_scaffold_2254                      I 17 C 0
s Mus_caroli.LT608236.1                                  70771603 8 +  92629107 aagaaa-ca
i Mus_caroli.LT608236.1                                 I 7 C 0
s Mus_musculus.chr16                                     75493656 8 +  98207768 aagaaa-ca
i Mus_musculus.chr16                                    I 7 C 0
s Mus_pahari.LT608305.1                                  67560033 8 +  89017189 Tagaaa-ca
i Mus_pahari.LT608305.1                                 I 7 C 0
s Mus_spretus.CM004110.1                                 74336383 6 +  97876770 aagaaa---
i Mus_spretus.CM004110.1                                I 7 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             14638 5 +     98495 ---aaa-tg
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 1 C 0
s Mustela_putorius.JH417978.1                             4427971 8 -  28371801 TAGAAA-TG
i Mustela_putorius.JH417978.1                           I 9 C 0
s Myotis_brandtii.KE161952.1                               971025 4 +   8389877 ----tc-tg
i Myotis_brandtii.KE161952.1                            I 17 C 0
s Myotis_davidii.KB114863.1                               5022446 4 +   6462685 ----TC-TT
i Myotis_davidii.KB114863.1                             I 17 C 0
s Myotis_lucifugus.GL429887.1                             3468529 4 -   3747815 ----tc-tg
i Myotis_lucifugus.GL429887.1                           I 17 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        13770 4 +     66751 ----tc-tt
i Myotis_myotis.MyoMyo_scaffold_6123                    I 17 C 0
s Nannospalax_galili.KL201303.1                            120135 8 +    362372 TAGAAA-TG
i Nannospalax_galili.KL201303.1                         I 7 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4490102 8 -  14209539 CAGAAA-TG
i Neomonachus_schauinslandi.NINY01007774.1              I 9 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3954576 8 -   4490290 CAGAAG-TG
i Neophocaena_asiaeorientalis.KZ688543.1                I 9 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  50310 4 +     94413 ----tc-tg
i Noctilio_leporinus.NocLep_scaffold_12062              I 17 C 0
s Nomascus_annamensis.k141_762468                               5 8 -      2755 CATAAA-TG
i Nomascus_annamensis.k141_762468                       C 0 C 0
s Nomascus_concolor.k141_70405                                626 8 +      1153 CATAAA-TG
i Nomascus_concolor.k141_70405                          C 0 C 0
s Nomascus_gabriellae.k141_1400361                            556 8 -      2203 CATAAA-TG
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_1022                             580 8 -     11638 CATAAA-TG
i Nomascus_siki_b.tarseq_1022                       C 0 C 0
s Nomascus_siki_a.k141_421408                                   470 8 +     16235 CATAAA-TG
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                37840 8 +   3668941 CAGAAA-TA
i Nyctereutes_procyonoides.CAJHUB010000786.1            I 9 C 0
s Nycticebus_bengalensis.LG16                            65571597 8 -  95554990 CATAAA-TA
i Nycticebus_bengalensis.LG16                           I 9 C 0
s Nycticebus_coucang.k141_771591                            15006 8 +     16181 CATAAA-TA
i Nycticebus_coucang.k141_771591                        I 9 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65679793 8 +  89412551 CATAAA-TA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     I 9 C 0
s Odobenus_rosmarus.KB229369.1                             684804 8 -   3126709 CAGAAa-tg
i Odobenus_rosmarus.KB229369.1                          I 9 C 0
s Odocoileus_virginianus.KZ101650.1                       1083420 8 +   1425656 CAGAAg-ta
i Odocoileus_virginianus.KZ101650.1                     I 9 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         41503 8 +     78940 CAGAAg-ta
i Okapia_johnstoni.LVCL01S0017931.1                     I 9 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  130177 8 +    145789 TAAAGC-TG
i Ondatra_zibethicus.OndZib_scaffold_6821               I 7 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  42868 8 +     62360 TAAAAC-TG
i Onychomys_torridus.OnyTor_scaffold_12578              I 7 C 0
s Orcinus_orca.KB316965.1                                 7228252 8 -   7562323 CAGAAG-TG
i Orcinus_orca.KB316965.1                               I 9 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              64033 8 -     66828 CAGAAA-TG
i Orycteropus_afer.OryAfe_flattened_line_13509          I 9 C 0
s Oryctolagus_cuniculus.CM000803.1                      141883641 8 + 163896628 CAGAAG-TG
i Oryctolagus_cuniculus.CM000803.1                      I 9 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      314978 8 -    505867 CAGAAA-TA
i Otocyon_megalotis.JAEUCK010005121.1                   I 9 C 0
s Otolemur_crassicaudatus.k141_505435                        4946 8 -     53940 CATAAA-CA
i Otolemur_crassicaudatus.k141_505435                   I 9 C 0
s Otolemur_garnettii.GL873528.1                          18012919 8 -  38779656 CATAAA-CA
i Otolemur_garnettii.GL873528.1                         I 9 C 0
s Ovis_aries.CM001582.2                                 134082432 8 - 275406953 CAGAAG-TA
i Ovis_aries.CM001582.2                                 I 9 I 2
s Ovis_canadensis.OviCan_scaffold_6251                      83660 8 +    140051 CAGAAG-TA
i Ovis_canadensis.OviCan_scaffold_6251                  I 9 C 0
s Pan_paniscus.CM003386.1                               127578300 8 - 205426864 CATAAA-TG
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120155460 8 - 196562556 CATAAA-TG
i Pan_troglodytes.CM009241.2                            C 0 I 17
s Panthera_onca.PanOnc_flattened_line_1615                  39706 8 +    295523 CAGAAA-TG
i Panthera_onca.PanOnc_flattened_line_1615              I 9 C 0
s Panthera_pardus.KV860323.1                              3643521 8 +  18214204 CAGAAA-TG
i Panthera_pardus.KV860323.1                            I 9 C 0
s Panthera_tigris.KE721879.1                              5033169 8 -   6340057 CAGAAA-TG
i Panthera_tigris.KE721879.1                            I 9 C 0
s Pantholops_hodgsonii.KE114631.1                         1071301 8 -   1292953 CAGAAG-TA
i Pantholops_hodgsonii.KE114631.1                       I 9 C 0
s Papio_anubis.CM001492.2                               188160180 8 - 188283584 CATAAA-TG
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              3270 8 +     25005 CATAAA-TG
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47517552 8 +  47705337 CATAAA-TG
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 71543 8 -    104429 CATAAA-TG
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   10075 8 +     14967 CATAAA-TG
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 5940 8 -      7628 CATAAA-TG
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    121204 8 -    135482 CAGAAA-TG
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 I 9 C 0
s Perodicticus_ibeanus.k141_117958                          10616 8 -     23713 CATAAA-TA
i Perodicticus_ibeanus.k141_117958                      I 9 C 0
s Perodicticus_potto.k141_1136815                           11756 8 +     61070 CATAAA-TA
i Perodicticus_potto.k141_1136815                       I 9 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       2038 8 +     49596 CAGAAA-TG
i Perognathus_longimembris.PerPac_flattened_line_19359  I 12 C 0
s Peromyscus_maniculatus.KI615518.1                       4955234 8 -   8017169 TAAAAC-TG
i Peromyscus_maniculatus.KI615518.1                     I 7 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    17091 8 -     36578 TAGAAA-TG
i Petromus_typicus.PetTyp_scaffold_33007                I 7 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              2717 8 +      8220 CAGAAG-TG
i Phocoena_phocoena.PhoPho_flattened_line_53071         I 9 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            99308 4 +    112873 ----TC-TG
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        I 17 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           9188 8 +     21690 CAGAAG-TG
i Platanista_gangetica.PlaMin_flattened_line_72990      I 9 C 0
s Plecturocebus_bernhardi.k141_959214                       25875 8 +     44506 CATAAA-TG
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        26088 8 +     67491 CATAAA-TG
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      16327 8 -     98129 CATAAA-TG
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     25928 8 +    147771 CATAAA-TG
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         2563 8 -     43940 CATAAA-TG
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          6646 8 -     55515 CATAAA-TG
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         26000 8 +    152463 CATAAA-TG
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       3808 8 -    119457 CATAAA-TG
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         15723 8 +    134592 CATAAA-TG
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          26310 8 -     75465 CATAAA-TG
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              190923 8 -    373494 cataaa-tg
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19811570 8 +  19899266 CATAAA-TG
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                3735 8 -      9567 CAGAAA-CG
i Procavia_capensis.ProCapCap_scaffold_149274           I 9 C 0
s Prolemur_simus.MPIZ01000048.1                           6852542 8 +  12164890 CATAAA-TG
i Prolemur_simus.MPIZ01000048.1                         I 9 C 0
s Propithecus_coquerelli.NW_012147863.1                     21570 8 -     30946 CACAga-tg
i Propithecus_coquerelli.NW_012147863.1                 I 9 C 0
s Propithecus_coronatus.k141_1353159                         7626 8 +     11805 CACGGA-TG
i Propithecus_coronatus.k141_1353159                    I 9 C 0
s Propithecus_diadema.k141_577245                           46974 8 +     52369 CACAGA-TG
i Propithecus_diadema.k141_577245                       I 9 C 0
s Propithecus_edwardsi.k141_1317105                         39361 8 -     44753 CACAGA-TG
i Propithecus_edwardsi.k141_1317105                     I 9 C 0
s Propithecus_perrieri.k141_7554                            21284 8 +     27322 CACAGA-TG
i Propithecus_perrieri.k141_7554                        I 9 C 0
s Propithecus_tattersalli.k141_907138                       20918 8 -     53241 CACAGA-TG
i Propithecus_tattersalli.k141_907138                   I 9 C 0
s Propithecus_verreauxi.k141_158021                         43182 8 -     48185 CACAGA-TG
i Propithecus_verreauxi.k141_158021                     I 9 C 0
s Psammomys_obesus.NESX01026517.1                           38029 8 +     77221 TAGAAA-TG
i Psammomys_obesus.NESX01026517.1                       I 7 C 0
s Pteronotus_parnellii.KE867983.1                            5859 4 -     27784 ----TC-TG
i Pteronotus_parnellii.KE867983.1                       I 17 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        250094 8 -    344369 TAAAAA-TG
i Pteronura_brasiliensis.PteBra_flattened_line_1343     I 9 C 0
s Puma_concolor.QAVW01000427.1                          131539817 8 - 161321710 CAGAAA-TG
i Puma_concolor.QAVW01000427.1                          I 9 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                20284 8 +     68503 CAGAAG-TA
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 9 C 0
s Rattus_norvegicus.chr11                                13917435 8 +  90463843 TAGAAA-cg
i Rattus_norvegicus.chr11                               I 7 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1792395 8 +   2252614 CAGATG-TG
i Rhinolophus_sinicus.LVEH01000179.1                    I 9 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                       694 8 -      4338 CAGAAG-TA
i Saiga_tatarica.SaiTat_scaffold_371890                 I 9 C 0
s Saimiri_boliviensis.NW_024100938.1                     15676332 8 -  43202129 cataaa-tg
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        8245 8 +     34089 CATAAA-TG
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              8185 8 -     60842 CATAAA-TG
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              8279 8 +     67014 CATAAA-TG
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              8256 8 +     60816 CATAAA-TG
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 8193 8 -     76454 CATAAA-TG
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17344980 8 -  30362882 CATAAA-TG
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         24301 8 -     62485 CATAAA-TG
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   39426 8 -    114521 CAGAAA-AG
i Scalopus_aquaticus.ScaAqu_scaffold_9300               I 9 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  104797 8 -    120886 TAAAAC-TG
i Sigmodon_hispidus.SigHis_scaffold_11332               I 7 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            23352 8 +    739146 CAGAAA-TG
i Solenodon_paradoxus.SolPar_flattened_line_1012        I 9 C 0
s Sorex_araneus.JH798170.1                               17769808 8 -  27805282 CCTAaa-tg
i Sorex_araneus.JH798170.1                              I 6 C 0
s Spermophilus_dauricus.KZ294190.1                        2243843 8 +   2842873 TAGAAA-TG
i Spermophilus_dauricus.KZ294190.1                      I 12 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             238613 8 -    276980 CAGAAA-TG
i Spilogale_gracilis.SpiGra_flattened_line_905          I 9 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            33024 8 +     62062 TAGAAA-TG
i Suricata_suricatta.SurSur_flattened_line_20339        I 9 C 0
s Sus_scrofa.CM000824.4                                 189274793 8 + 218635234 TAGAAG-TA
i Sus_scrofa.CM000824.4                                 I 9 C 0
s Symphalangus_syndactylus.tarseq_24                        18593 8 -  13920577 CATAAA-TG
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                2083 4 +     20549 ----tc-tg
i Tadarida_brasiliensis.TadBra_scaffold_61492           I 17 C 0
s Tapirus_indicus.TapInd_scaffold_176                      810579 8 +   1148477 CTGAAA-TG
i Tapirus_indicus.TapInd_scaffold_176                   I 9 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  61221 8 +     99546 CTGAAA-TG
i Tapirus_terrestris.TapTer_scaffold_14939              I 9 C 0
s Tarsius_lariang.k141_609102                               31166 8 +     42269 TATAAA-TG
i Tarsius_lariang.k141_609102                           I 9 C 0
s Tarsius_wallacei.k141_48636                               64475 8 +     65473 TATAAA-TG
i Tarsius_wallacei.k141_48636                           I 9 C 0
s Theropithecus_gelada.CM009951.1                       194011713 8 - 194193292 CATAAA-TG
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  137857 4 -    259118 ----gc-tg
i Tonatia_saurophila.TonSau_scaffold_3334               I 17 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   9316 8 +     90398 CAGAAG-TG
i Tragulus_javanicus.TraJav_scaffold_14717              I 9 C 0
s Trichechus_manatus.JH594618.1                          16089628 8 +  31416278 CAGAAA-CG
i Trichechus_manatus.JH594618.1                         I 9 C 0
s Tupaia_chinensis.KB320831.1                             2797549 8 -   3938065 CAGaag-tg
i Tupaia_chinensis.KB320831.1                           I 9 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    9478 8 +     13056 CAGAAG-TG
i Tupaia_tana.TupTan_flattened_line_68454               I 9 C 0
s Tursiops_truncatus.MRVK01000923.1                      69316981 8 -  96451834 CAGAAG-TG
i Tursiops_truncatus.MRVK01000923.1                     I 9 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   9952 8 +     10241 CAGAAA-TG
i Uropsilus_gracilis.UroGra_scaffold_69449              I 9 C 0
s Ursus_maritimus.KK498671.1                              6520278 8 +  28682327 CAGAAA-TG
i Ursus_maritimus.KK498671.1                            I 9 C 0
s Varecia_rubra.k141_432109                                  9184 8 -     20643 CATAAA-TG
i Varecia_rubra.k141_432109                             I 9 C 0
s Varecia_variegata.k141_775891                             28719 8 -     33872 CATAAA-TG
i Varecia_variegata.k141_775891                         I 9 C 0
s Vicugna_pacos.KN269600.1                                1528014 8 -   2331223 CAGAAA-TG
i Vicugna_pacos.KN269600.1                              I 9 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                144205 8 -    281493 CAGAAA-TA
i Vulpes_lagopus.VulLag_flattened_line_2045             I 9 C 0
s Xerus_inauris.XerIna_scaffold_7898                       131339 8 -    134049 TAGAAA-TG
i Xerus_inauris.XerIna_scaffold_7898                    I 12 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        219660 8 -    227762 CAGAAA-TG
i Zalophus_californianus.ZalCal_flattened_line_4097     I 9 C 0
s Zapus_hudsonius.ZapHud_scaffold_256618                      277 7 -      2259 TAGAGA--A
i Zapus_hudsonius.ZapHud_scaffold_256618                I 7 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            1725 8 -     13665 CAGAAG-TG
i Ziphius_cavirostris.ZipCav_flattened_line_60625       I 9 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Dinomys_branickii.DinBra_scaffold_1996                   158442 1030 +    228994 I
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           4051 456 -      6963 I
e Ochotona_princeps.JH802095.1                            4999348 675 -  23139505 I
e Tamandua_tetradactyla.TamTet_scaffold_26877               16259 379 +     45698 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             6589 379 -      8794 I
e Kogia_breviceps.KogBre_flattened_line_35920               27132 184 +     37189 I
e Hyaena_hyaena.HyaHya_flattened_line_20729                 22998 0 -     67322 C
e Elephantulus_edwardii.JH947210.1                        7830035 1277 +  15467074 I
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Echinops_telfairi.JH980316.1                           22999931 2 -  44670279 I
e Dasypus_novemcinctus.JH568778.1                          185121 383 -   6883506 I
e Choloepus_hoffmanni.KN194586.1                           763329 503 +    964067 I
e Choloepus_didactylus.ChoDid_scaffold_36182                18024 504 -     21363 I
e Trachypithecus_pileatus.k141_1022309                       5226 0 +     13828 C
e Trachypithecus_phayrei.ctg3                            44662914 0 -  44834318 C
e Trachypithecus_obscurus.k141_1115109                       8130 0 -     28054 C
e Trachypithecus_melamera.k141_699241                        2986 0 -     24393 C
e Trachypithecus_leucocephalus.k141_381681                   3005 0 +     12481 C
e Trachypithecus_laotum.k141_760702                          4719 0 +     14371 C
e Trachypithecus_hatinhensis.k141_504423                     6067 0 -     15592 C
e Trachypithecus_germaini.k141_868450                        3883 0 -     11566 C
e Trachypithecus_geei.k141_670367                           46082 0 -     54611 C
e Trachypithecus_francoisi.k141_768164                       4689 0 -     14244 C
e Trachypithecus_cristatus.k141_1011511                      5261 0 -     12939 C
e Trachypithecus_crepusculus.k141_1588528                   23360 0 -     32910 C
e Trachypithecus_auratus.k141_738098                        29800 0 +     38948 C
e Semnopithecus_vetulus.k141_1143185                        16479 0 +     30600 C
e Semnopithecus_schistaceus.k141_387461                     33457 0 +     42640 C
e Semnopithecus_priam.k141_410937                           40312 0 +     46263 C
e Semnopithecus_johnii.k141_785014                         121532 0 +    130994 C
e Semnopithecus_hypoleucos.k141_761524                      11528 0 +     20762 C
e Semnopithecus_entellus.k141_1572367                        6153 0 +     15331 C
e Rhinopithecus_strykeri.ctg4                            44859307 0 -  45163003 C
e Rhinopithecus_bieti.k119_554384                            2917 0 -     17045 C
e Pygathrix_nigripes_a.k141_101123                             8537 0 +     18040 C
e Pygathrix_nigripes_b.ctg79                                 6809148 0 +   6970761 C
e Pygathrix_cinerea.k141_374971                             32651 0 +     56732 C
e Presbytis_mitrata.k141_860013                              8661 0 +     14865 C
e Presbytis_comata.k141_672698                               8546 0 -     15069 C
e Pithecia_vanzolinii.k141_831006                           15424 0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514 0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521 0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292 0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093 0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038 0 +     78826 C
e Pithecia_albicans.k141_991845                             45662 0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000036.1               26743271 0 +  26888534 C
e Piliocolobus_kirkii.k141_929665                            4788 0 +      7694 C
e Piliocolobus_gordonorum.k141_1270531                       5421 0 -     17985 C
e Piliocolobus_badius.k141_1987485                           4802 0 -      5908 C
e Octodon_degus.JH651621.1                                3687420 1881 +  10294119 I
e Nasalis_larvatus.k141_153429                              11264 0 +     48152 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     91920 1922 -    117718 I
e Hystrix_cristata.HysCri_scaffold_50788                     7688 1865 +     22540 I
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 32592 1717 -     67205 I
e Colobus_polykomos.k141_1406057                            19335 0 +     23629 C
e Colobus_guereza.LG08                                  147667351 0 + 156195979 C
e Colobus_angolensis.KN985967.1                          10889423 0 +  10971483 C
e Chinchilla_lanigera.JH721867.1                         15963245 964 +  43084221 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               17325 17 +    209709 GA---A-ATTGA------A-A-AG---CA---AT--A
s Acinonyx_jubatus.LLWD01000356.1                         2039300 17 +   3721120 GA---A-ATTGG------A-A-AA---CA---GT--A
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    117547 17 -    189883 GA---A-ATTAA------A-A-CA---TA---GA--A
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 I 3
s Ailuropoda_melanoleuca.LNAT01000321.1                  10662992 17 +  23371972 GA---A-ATtgg------a-a-aa---ca---ac--a
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7099780 17 -  16596857 GA---A-ATTGG------A-A-AA---CA---AT--A
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   21507 17 -     22067 GA---A-ATTGA------A-A-TA---TA---AT--A
i Allactaga_bullata.AllBul_scaffold_70162               I 1 C 0
s Allenopithecus_nigroviridis.k141_2469532                   5197 17 -     60446 GA---A-ATTGA------A-A-AG---CA---AT--A
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         5914 17 -     29318 GA---A-ATTGA------A-A-AG---CA---AT--A
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         4852 17 +     38766 GA---A-ATTGA------A-A-AG---CA---AT--A
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          5808 17 -     80423 GA---A-ATTGA------A-A-AG---CA---AT--A
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                               780 17 +     19852 GA---A-AATGA------A-A-AG---CA---AT--A
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                3036 17 -     12443 GA---A-AATGA------A-A-AG---CA---AT--A
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                              335 17 +      5070 GA---A-AATGA------A-A-AG---CA---AT--A
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                   80 17 -      1641 GA---A-AATGA------A-A-AG---CA---AT--A
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          2819 17 -     24210 GA---A-AATGA------A-A-AG---CA---AT--A
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           29401 17 -     30219 GA---A-AATGA------A-A-AG---CA---AT--A
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_405616                              5237 17 +     16794 GA---A-AATGA------A-A-AG---CA---AT--A
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                             369 17 -      1470 GA---A-AATGA------A-A-AG---CA---AT--A
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             4514 17 -      9835 GA---A-AATGA------A-A-AG---CA---AT--A
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3525300 17 +   4113121 TA---A-ACGGG------A-A-GA---AA---AT--A
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      392300  6 -    631301 ca---g-act---------------------------
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 I 17
s Antilocapra_americana.AntAmePen_scaffold_27338             2731 17 +     55446 GA---A-ATGGG------A-A-GA---AA---AC--A
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 66127 17 +     78111 GA---A-AATGA------A-A-AG---CA---AT--A
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            9073 17 +     22701 GA---A-AATGA------A-A-AG---CA---AT--A
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5753031 17 +   9889416 ga---a-aatga------a-a-ag---ca---at--a
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             9629 17 -    104377 GA---A-AATGA------A-A-AG---CA---AT--A
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               9636 17 +     23246 GA---A-AATGA------A-A-AG---CA---AT--A
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     2167 17 +     11424 GA---A-ACTGG------A-A-AA----G---A-TTA
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        6253 17 +      9265 AA---G-ATGGA------A-A-AA---GA---CT--A
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                10724  6 -     29036 ca---g-acg---------------------------
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 I 17
s Ateles_geoffroyi_b.tarseq_2582                             9542922 17 +  39197703 GA---A-AATGA------A-A-AG---CA---AT--A
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             64195 17 +     85812 GA---A-AATGA------A-A-AG---CA---AT--A
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                15208 17 +     89302 GA---A-AATGA------A-A-AG---CA---AT--A
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             19709 17 -     58268 GA---A-AATGA------A-A-AG---CA---AT--A
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             67703 17 +    119057 GA---A-AATGA------A-A-AG---CA---AT--A
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               9672 17 -     25888 GA---A-AATGA------A-A-AG---CA---AT--A
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                10728 17 -     16375 TA---A-ATTGA------A-A-AA---AA---CT--A
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               4344 17 +      6337 TA---A-ATTGA------A-A-AA---AA---CT--A
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26383775 17 +  51448160 GA---A-ACTGG------A-A-GA---GA---AT--G
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        8948 17 -     13118 GA---A-ACTGG------A-A-GA---GA---AT--G
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   47762 17 -     72089 GA---A-ATGGG------A-A-GA---AA---AT--G
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   301906 17 -   6870073 ga---a-atggg------a-a-ga---aa---at--a
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22956004 17 + 161108492 ga---a-atggg------a-a-ga---aa---at--a
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     418269 17 +    998990 ga---a-atggg------a-a-ga---aa---at--a
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22664658 17 + 158972876 ga---a-atggg------a-a-ga---aa---at--a
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               674421 17 +   1914593 ga---a-atggg------a-a-ga---aa---at--a
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               117574 17 -    171031 GA---A-AATGA------A-A-AA---CA---AT--A
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 16594 17 +    125063 GA---A-AATGA------A-A-AA---CA---AT--A
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                18641 17 -    216513 GA---A-AATGA------A-A-AA---CA---AT--A
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       11184 17 -    134917 GA---A-AATGA------A-A-AA---CA---AT--A
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3222912 17 -   8989139 GA---A-TCTGG------A-A-GA---GA---AT--A
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           400614 17 -  15254737 GA---A-TCTGG------A-A-GA---GA---AT--A
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2976350 17 +   6889770 GA---A-TCTGG------A-A-GA---GA---AT--A
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11526133 17 +  39901454 GA---A-ATTGG------A-A-AA---CA---AC--A
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   21107 17 +     87036 GA---A-ATTGG------A-A-AA---CA---AC--A
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11272816 17 -  35597290 GA---A-ATTGG------A-A-AA---CA---AC--A
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11095527 17 +  39895921 GA---A-ATTGG------A-A-AA---CA---AC--A
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16462312 17 -  44759192 GA---A-ATTGG------A-A-AA---CA---AC--A
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21330380 17 + 157394656 TA---A-ACGGG------A-A-GA---AA---AT--A
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135711597 17 - 157403528 TA---A-ACGGG------A-A-GA---AA---AT--A
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          313317 17 +    345090 GA---A-ACTTA------A-A-GA---TA---AT--A
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               61510  6 +     67245 ca---g-gct---------------------------
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 I 17
s Catagonus_wagneri.CatWag_scaffold_1305                   162443 17 -    276539 GA---A-ATTGG------A-A-GA---GA---AG--A
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15789448 17 -  24422027 GA---A-ATTGA------A-A-TA---CA---AT--A
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15801387 17 -  24440124 GA---A-ATTGA------A-A-TA---CA---AT--A
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       179559 17 +    436027 GA---A-ATTGA------A-A-TA---CA---AT--A
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18894407 17 -  29618158 GA---A-AATGA------A-A-AG---CG---AT--A
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                11951 17 -     26817 GA---A-AATGA------A-A-AG---CG---AT--A
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                16195 17 +     25043 GA---A-AATGA------A-A-AG---CG---AT--A
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                        12321 17 +     21754 GA---A-ACTTA------A-A-GA---TA---AT--A
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4367350 17 +   7569818 GA---A-ATAGG------A-A-AA---GA---GT--A
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         7107 17 -      9338 GA---A-ATAGG------A-A-AA---GA---GT--A
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6559138 17 +   6739814 GA---A-ATTGA------A-A-AG---CA---AT--A
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      30615 17 +     60454 GA---A-ATTGA------A-A-AG---CA---AT--A
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          5819 17 -     21101 GA---A-ATTGA------A-A-AG---CA---AT--A
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         63129 17 -    107033 GA---A-ATTGA------A-A-AG---CA---AT--A
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        5992 17 -     17608 GA---A-ATTGA------A-A-AG---CA---AT--A
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          3157 17 +     45019 GA---A-ATTGA------A-A-AG---CA---AT--A
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           3217 17 +     15177 GA---A-ATTGA------A-A-AG---CA---AT--A
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          6039 17 +     16677 GA---A-ATTGA------A-A-AG---CA---AT--A
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           28229 17 +     35983 GA---A-ATTGA------A-A-AG---CA---AT--A
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11994760 17 +  12117833 GA---A-ATTGA------A-A-AG---CA---AT--A
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46481521 17 +  46592721 GA---A-ATTGA------A-A-AG---CA---AT--A
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      45070 17 -     45581 GA---A-ATTGA------A-A-AG---CA---AT--A
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       6053 17 +     35577 GA---A-ATTGA------A-A-AG---CA---AT--A
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        5847 17 -     25661 GA---A-ATTGA------A-A-AG---CA---AT--A
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        5804 17 -     17744 GA---A-ATTGA------A-A-AG---CA---AT--A
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        25388 17 +     37128 GA---A-ATTGA------A-A-AG---CA---AT--A
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           62952 17 -     68416 GA---A-ATTGA------A-A-AT---GA---CT--A
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                           12058 17 +     13308 GA---A-ATTGA------A-A-AT---GA---CT--A
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             9234 17 -     18223 GA---A-AATGA------A-A-AG---CA---AT--A
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                               973 17 +    188999 GA---A-AATGA------A-A-AG---CA---AT--A
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           45271 17 +     57117 GA---A-AATGA------A-A-AG---CA---AT--A
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          49951 17 +     54541 GA---A-AATGA------A-A-AG---CA---AT--A
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chiropotes_israelita.k141_1189915                         74753 17 +    196370 GA---A-AATGA------A-A-AG---CA---AT--A
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          18934 17 +     40510 GA---A-AATGA------A-A-AG---CA---AT--A
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15143573 17 -  15256731 GA---A-ATTGA------A-A-AG---CA---AT--A
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      38037 17 -     53260 GA---A-ATTGA------A-A-AG---CA---AT--A
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101148596 17 + 101219884 GA---A-ATTGA------A-A-AG---CA---AT--A
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_629495              2001 21 -      3120 GA---A-AT---TGGTTTT-AAAT---GA---AT--A
i Chrysochloris_asiatica.ChrAsi_scaffold_629495         C 0 C 0
s Condylura_cristata.JH655880.1                          60621972 20 +  78930452 ta---a-attgg------a-a-aa---aaaaaat--a
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         1987 17 -      5782 AA---A-ATTGG------A-A-GA---GA---AT--A
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 282419 17 -    399297 GA---A-ATTAG------A-G-CA---TA---AT--A
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53034784 17 +  72327488 GA---A-GTTAg------a-a-ca---ta---at--a
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              1398 17 -     22648 AA---A-ATTGG------A-A-AG---GA---AT--A
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            57294 17 -     70449 GA---A-ATCAG------A-A-AA---CA---AT--A
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  214171 20 -    956709 aa---a-atgta------a-c-taaGATG---AC--A
i Ctenodactylus_gundi.CteGun_scaffold_447               I 397 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                20620 17 +     26546 GA---A-ATTGG------A-A-AA---TA---AT--A
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             61760 17 -    236241 GA---A-ATTGG------A-A-AA---TA---AT--A
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16848887 17 +  31942871 GA---A-ATTGA------A-A-AA---GA---CT--A
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80040400 17 -  96802777 GA---A-ACTGC------A-A-GA---GA---AT--G
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18700931  6 -  18957592 CA---G-ACT---------------------------
i Desmodus_rotundus.KZ672188.1                          C 0 I 17
s Dicerorhinus_sumatrensis.PEKH010003161.1                 325997 17 +    993696 GA---A-ATAGG------A-A-AA---GA---GT--A
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   6638 17 +    151128 GA---A-ATAGG------A-A-AA---GA---GT--A
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dipodomys_ordii.KN672545.1                              3659955 17 +   4240102 GA---A-ATTGG------A-A-GA---TA---AT--A
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  2303 17 -     11986 GA---A-ATTGG------A-A-GA---GA---AT--A
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                39727 17 -     73477 GA---A-ATTGG------A-A-TG---TA---AT--A
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1495978 17 +   1727528 ga---a-atggg------a-a-ga---aa---at--a
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        243585 17 -    369425 GA---A-ATTAG------A-A-CA---TA---AT--A
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01198462.1                           1327 17 -      1901 GA---A-ATTAG------A-A-CA---TA---AT--A
i Ellobius_talpinus.LOJH01198462.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85877251 17 +  99434291 GA---A-ATTGG------A-A-AA---CA---AT--A
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4708689  6 +   6522550 CA---G-ATT---------------------------
i Eptesicus_fuscus.JH977687.1                           C 0 I 17
s Equus_asinus.JREZ01000062.1                             5856363 17 -   7175178 ga---a-atagg------a-a-aa---ag---at--a
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13354863 17 +  41866177 ga---a-atagg------a-a-aa---ag---at--a
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          16353 17 +     92910 ga---a-atagg------a-a-aa---ag---at--a
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11540815 16 +  16010500 GA---A-AGTAG------A-A-A----TA---AC--A
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48780606 17 -  48907691 GA---A-ATTGA------A-A-AG---CA---AT--A
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          318618 17 +    330699 GA---A-ACTGG------A-A-GA---GA---AT--G
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             65075 17 +     89355 GA---A-ACTGG------A-A-GA---GA---AT--G
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              9040 17 +     13586 GA---A-ATTGA------A-A-AA---GA---CT--A
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_1015201                              2303 17 -      4292 GA---A-ATTGA------A-A-AA---GA---CT--A
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            15436 17 +     36558 GA---A-ATTGA------A-A-AA---GG---CT--A
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            11761 17 +     60246 GA---A-ATTGA------A-A-AA---GA---CT--A
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                15244 17 +    109717 GA---A-ATTGA------A-A-AA---GA---CT--A
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 3229 17 -     19505 GA---A-ATTGA------A-A-AA---GA---CT--A
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                19901 17 +     27497 GA---A-ATTGA------A-A-AA---GA---CT--A
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           22357 17 +     26808 GA---A-ATTGA------A-A-AA---GA---CT--A
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                37092 17 +     46535 GA---A-ATTGA------A-A-AA---GA---CT--A
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              19831 17 -     29447 GA---A-ATTGA------A-A-AA---GA---CT--A
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.AANG03133801.1                                  346 17 -       736 GA---A-ATTGG------A-A-AA---CA---GT--A
i Felis_catus.AANG03133801.1                            C 0 C 0
s Felis_catus_fca126.CM031420.1                         129285695 17 - 158578461 GA---A-ATTGG------A-A-AA---CA---GT--A
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 26794 17 +     52776 GA---A-ATTGG------A-A-AA---CA---GT--A
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13895909 17 -  19261668 GA---A-ATTGG------A-A-AA---GA---GT--A
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     215094 17 -    847004 GA---G-ATTGA------A-A-AA---GA---CT--A
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           17455 17 -     43889 GA---G-ATTGA------A-A-AA---GA---CT--A
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          14598 17 +     27357 GA---G-ATTGA------A-A-AA---GA---CT--A
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               159339 17 +    324696 GA---A-GTTGG------A-A-AA---GA---AT--A
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    185776 17 -    189561 ga---a-atggg------a-a-ga---aa---at--a
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           16231 17 -     18683 GA---A-ATTAG------A-A-AA----A---AAT-A
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               9029 17 -     14630 GA---A-ATTGA------A-A-AG---CA---AT--A
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119656129 17 - 195582420 GA---A-ATTGA------A-A-AG---CA---AT--A
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   79576 14 +    118900 GA---A-ATTGG------A-A-AA----G---A----
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 I 10
s Hapalemur_alaotrensis.k141_1280836                         5824 17 +     10286 GA---A-ATTGA------A-A-AA---GA---CT--A
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             4302 17 -     11661 GA---A-ATTGA------A-A-AA---GA---CT--A
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             9629 17 +     56096 GA---A-ATTGA------A-A-AA---GA---CT--A
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        32878 17 -     42470 GA---A-ATTGA------A-A-AA---GA---CT--A
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        49504 17 -     54384 GA---A-ATTGA------A-A-AA---GA---CT--A
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              22435 17 +     53719 AA---A-ATTGG------A-A-AA---CA---AT--A
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                32647 17 -     91191 TA---A-ACGGG------A-A-GA---AA---AT--A
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2560426 17 +  31725842 GA---A-ATTGG------A-A-AA---GA---AT--G
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               62637 21 +     73687 GA---A-GCTGGT--T-GT-AACT---GA---AT--A
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              150398 17 +    277961 GA---A-ATTGG------A-A-GA---GA---AC--A
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      282803 17 -    477199 aa---a-attag------a-a-aa---ga---at--a
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959                572 17 +     26078 AA---A-ATTAG------A-A-AA---GA---AT--A
i Hipposideros_galeritus.HipGal_scaffold_52959          C 0 C 0
s Hoolock_leuconedys.ctg315                                   350027 17 +    431944 GA---A-ATTGA------A-A-AA---CA---AT--A
i Hoolock_leuconedys.ctg315                                C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           21015 17 -    119109 GA---A-ATTGA------A-A-TA---TA---AT--A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_1816750                             1508 17 +      3202 GA---A-ATTGA------A-A-AA---CA---AT--A
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1633646                              1478 17 -      2102 GA---A-ATTGA------A-A-AA---CA---AT--A
i Hylobates_agilis.k141_1633646                         C 0 C 0
s Hylobates_klossii.k141_468230                              2995 17 +      5464 GA---A-ATGGA------A-A-AA---CA---AT--A
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14628343 17 -  25970782 GA---A-ATTGA------A-A-AA---CA---AT--A
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                             894 17 +      4161 GA---A-ATTGA------A-A-AA---CA---AT--A
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             36451 17 -     60944 GA---A-ATTGA------A-A-AA---CA---AT--A
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7130146  9 +  13083262 GA---A-ATTAG------A------------------
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 I 5
s Indri_indri.k141_2197838                                   1301 17 +      3484 TA---A-ATTTA------T-A-AA---AA---CT--A
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              12612 17 +     17520 GA---A-ACTGC------A-A-GA---GA---AT--G
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8577200 17 +  11848649 GA---A-ATTAG------A-A-TA---TA---AT--A
i Jaculus_jaculus.JH725517.1                            I 1 C 0
s Lagothrix_lagothricha.k141_12968                          53791 17 -    147782 GA---A-AATGA------A-A-AG---CA---AT--A
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    5306  6 +     26176 ca---g-att---------------------------
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 I 17
s Lemur_catta.scaffold_1                                258411176 17 - 285822530 GA---A-ATTGA------A-A-AA---GA---CT--A
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        28479 17 +     39228 GA---A-ATTGA------A-A-AA---GA---CC--A
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            57843 17 +     63517 GA---A-ATTGA------A-A-AA---GA---CC--A
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        36223 17 -     38897 GA---A-ATTGA------A-A-AA---GA---CC--A
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      2269 17 -     13103 GA---A-ATTGA------A-A-AA---GA---CC--A
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3091215 17 -   3498232 GA---A-ATTGG------A-A-AA---CA---AT--A
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    20633 18 +     22452 GA---A-ACCTT------A-A-AA----G---AATTA
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            139546 17 +   3060487 GA---A-ACTGC------A-A-GA---GA---AT--G
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19252226 17 +  19376315 GA---A-ATTGA------A-A-AG---CA---AT--A
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           15042 17 +     84689 GA---G-ATTGA------A-A-AA---GA---CT--A
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3782781 17 +   6799190 GA---G-ATTGA------A-A-AA---GA---CT--A
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20598562 21 -  62548349 GA---A-ATTGGT--TT-T-AAAT---GA---AT--A
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11094983 17 +  39895028 GA---A-ATTGG------A-A-AA---CA---AC--A
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             23977 17 +     74745 GA---A-ATTGA------A-A-AG---CA---AT--A
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12710438 17 +  12821369 GA---A-ATTGA------A-A-AG---CA---AT--A
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                3012 17 -     26467 GA---A-ATTGA------A-A-AG---CA---AT--A
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           50883 17 +     63263 GA---A-ATTGA------A-A-AG---CA---AT--A
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 2993 17 -     26361 GG---A-ATTGA------A-A-AG---CA---AT--A
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 6183 17 -      7381 GA---A-ATTGA------A-A-AG---CA---AT--A
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  49412 17 -     79256 GA---A-ATTGA------A-A-AG---CA---AT--A
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196039510 17 + 196197964 GA---A-ATTGA------A-A-AG---CA---AT--A
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11449680 17 +  11645122 GA---A-ATTGA------A-A-AG---CA---AT--A
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   8366 17 -     46448 GA---A-ATTGA------A-A-AG---CA---AT--A
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                6028 17 -     13212 GA---A-ATTGA------A-A-AG---CA---AT--A
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 19709 17 -     55006 GA---A-ATTGA------A-A-AG---CA---AT--A
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43844824 17 +  43892939 GA---A-ATTGA------A-A-AG---CA---AT--A
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               20992 17 -     24607 GA---A-ATTGA------A-A-AG---CA---AT--A
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               8363 17 -     27140 GA---A-ATTGA------A-A-AG---CA---AT--A
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43441399 17 -  43563597 GA---A-ATTGA------A-A-AG---CA---AT--A
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4454203 17 -   4543643 GA---A-ATTGA------A-A-AG---CA---AT--A
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            151983 11 +    252755 GA---A-ATTGG------A-G-A--------------
i Manis_javanica.JSZB01003966.1                         C 0 I 3
s Manis_pentadactyla.KN017078.1                             39572 11 +     58827 GA---A-ATTGG------A-G-A--------------
i Manis_pentadactyla.KN017078.1                         C 0 I 3
s Marmota_marmota.CZRN01000005.1                         36878015  9 +  64221397 GA---A-ATTAG------A------------------
i Marmota_marmota.CZRN01000005.1                        C 0 I 5
s Megaderma_lyra.MegLyr_scaffold_3562                       65209 17 -    234502 GA---A-ATTGG------A-A-AA---TA---AT--G
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             6134 17 -     87323 GA---A-ATTGG------A-A-AA---CA---AT--A
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 1040  8 +    115071 GC---A-ATTGG-------------------------
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 I 7
s Mesocricetus_auratus.KB708139.1                         1051307 17 -  26018355 GA---A-ATTAG------A-A-CG---TA---GT--A
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    2201 17 -     12939 GA---A-ACTGG------A-A-GA---GA---AT--G
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16514239 17 +  47401472 GA---A-ATTGA------C-A-AA---GA---CT--A
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  41258 12 -     48017 TA---A-AT---TTGTTTG------------------
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               24684  6 -     32043 ca---g-tct---------------------------
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 I 17
s Microtus_ochrogaster.CM001673.1                        22823994 17 -  98408828 GA---A-ATTAG------A-A-CA---TA---AT--A
i Microtus_ochrogaster.CM001673.1                       C 0 I 394
s Miniopterus_natalensis.LDJU01000022.1                   8212749  6 +  10048721 ca---g-att---------------------------
i Miniopterus_natalensis.LDJU01000022.1                 C 0 I 17
s Miniopterus_schreibersii.MinSch_scaffold_24116            37239  6 +     45743 ca---g-att---------------------------
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 I 17
s Miopithecus_ogouensis.k141_2935907                         5945 17 +     29742 GA---A-ATTGA------A-A-AG---CA---AT--A
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        16711 17 -    104932 GA---A-ATTGG------A-A-AA---CA---AT--A
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     4919 17 -     12809 GA---A-ATTGA------A-A-AA---GA---CT--A
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 149993 17 +    154973 GA---A-ACTGC------A-A-GA---GA---AT--G
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                163219  6 +    265003 ca---g-acc---------------------------
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 I 17
s Moschus_moschiferus.MosMos_scaffold_78805                  5996 17 -     19904 GA---A-ATGGG------A-A-GA---AA---AT--A
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  150116 17 -    168139 GA---C-ATTGG------A-A-AA---CA---AT--A
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          24159  6 -    100666 ca---g-att---------------------------
i Murina_feae.MurFea_scaffold_2254                      C 0 I 17
s Mus_caroli.LT608236.1                                  70771611 18 +  92629107 aa--aa-attaa------a-a-ca---ta---aa--a
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75493664 19 +  98207768 aa--aatattaa------a-a-ca---ta---aa--a
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67560041 17 +  89017189 aa---a-gttaa------a-a-ca---ta---aa--a
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74336389 19 +  97876770 aa--aatattaa------a-a-ca---ta---aa--c
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             14643 16 +     98495 ga---a-attag------a-a-aa----a---aa--a
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4427979 17 -  28371801 GA---A-ATTGG------A-A-AA---CA---AT--A
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myotis_brandtii.KE161952.1                               971029  6 +   8389877 ca---g-att---------------------------
i Myotis_brandtii.KE161952.1                            C 0 I 17
s Myotis_davidii.KB114863.1                               5022450  6 +   6462685 CA---G-ATT---------------------------
i Myotis_davidii.KB114863.1                             C 0 I 17
s Myotis_lucifugus.GL429887.1                             3468533  6 -   3747815 ca---g-att---------------------------
i Myotis_lucifugus.GL429887.1                           C 0 I 17
s Myotis_myotis.MyoMyo_scaffold_6123                        13774  6 +     66751 ca---g-att---------------------------
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 I 17
s Nannospalax_galili.KL201303.1                            120143 17 +    362372 GA---A-ATCTG------C-A-TA---TA---AT--A
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4490110 17 -  14209539 GA---A-ATTGG------A-A-AA---CA---AT--A
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3954584 17 -   4490290 GA---A-ACTGC------A-A-GA---GA---AT--G
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  50314  6 +     94413 ca---g-tct---------------------------
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 I 17
s Nomascus_annamensis.k141_762468                              13 17 -      2755 GA---A-ATTGA------A-A-AA---CA---AT--A
i Nomascus_annamensis.k141_762468                       C 0 C 0
s Nomascus_concolor.k141_70405                                634 17 +      1153 GA---A-ATTGA------A-A-AA---CA---AT--A
i Nomascus_concolor.k141_70405                          C 0 C 0
s Nomascus_gabriellae.k141_1400361                            564 17 -      2203 GA---A-ATTGA------A-A-AA---CA---AT--A
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_1022                             588 17 -     11638 GA---A-ATTGA------A-A-AA---CA---AT--A
i Nomascus_siki_b.tarseq_1022                       C 0 C 0
s Nomascus_siki_a.k141_421408                                   478 17 +     16235 GA---A-ATTGA------A-A-AA---CA---AT--A
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                37848 17 +   3668941 GA---A-ATTGG------A-A-AA---CA---AT--A
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65571605 17 -  95554990 GA---G-ATTGA------A-A-AA---GA---CT--A
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_771591                            15014 17 +     16181 GA---G-ATTGA------A-A-AA---GA---CT--A
i Nycticebus_coucang.k141_771591                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65679801 17 +  89412551 GA---G-ATTGA------A-A-AA---GA---CT--A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Odobenus_rosmarus.KB229369.1                             684812 17 -   3126709 ga---a-attgg------a-a-aa---ta---at--a
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1083428 17 +   1425656 ga---a-atggg------a-a-ga---aa---at--a
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         41511 17 +     78940 ga---a-atggg------a-a-ga---aa---at--a
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  130185 17 +    145789 GA---A-ATTAG------A-A-CA---TA---AT--A
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  42876 17 +     62360 GA---A-ATCAG------A-A-CA---TA---AT--A
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7228260 17 -   7562323 GA---A-ACTGC------A-A-GA---GA---AT--A
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              64041 15 -     66828 GA---A-AT---------T-AAAT---GA---TT--A
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141883649 18 + 163896628 GA---A-ACCAG------A-A-AA----G---AATTA
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      314986 17 -    505867 GA---A-ATTGG------A-A-AA---CA---AT--A
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        4954 17 -     53940 GA---G-ATTGA------A-A-AA---GA---CT--A
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18012927 17 -  38779656 GA---G-ATTGA------A-A-AA---GA---CT--A
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134082442  8 - 275406953 -------ACGGG------A-A-G--------------
i Ovis_aries.CM001582.2                                 I 2 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      83668 17 +    140051 TA---A-ACGGG------A-A-GA---AA---AT--A
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127578308 17 - 205426864 GA---A-ATTGA------A-A-AG---CA---GT--A
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.NBAG03000771.1                           185259 17 +    210065 GA---A-ATTGA------A-A-AG---CA---AT--A
i Pan_troglodytes.NBAG03000771.1                        I 166 I 820
s Panthera_onca.PanOnc_flattened_line_1615                  39714 17 +    295523 GA---A-ATTGG------A-A-AA---CA---GT--A
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3643529 17 +  18214204 GA---A-ATTGG------A-A-AA---CA---GT--A
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5033177 17 -   6340057 GA---A-ATTGG------A-A-AA---CA---GT--A
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1071309 17 -   1292953 TA---A-ACGGG------A-A-GA---AA---AT--A
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188160188 17 - 188283584 GA---A-ATTGA------A-A-AG---CA---AT--A
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              3278 17 +     25005 GA---A-ATTGA------A-A-AG---CA---AT--A
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47517560 17 +  47705337 GA---A-ATTGA------A-A-AG---CA---AT--A
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 71551 17 -    104429 GA---A-ATTGA------A-A-AG---CA---AT--A
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   10083 17 +     14967 GA---A-ATTGA------A-A-AG---CA---AT--A
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 5948 17 -      7628 GA---A-ATTGA------A-A-AG---CA---AT--A
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    121212 17 -    135482 GA---G-ATTGG------A-A-AA---CA---AT--A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          10624 20 -     23713 AAGATG-ATGGG------A-A-AA---GA---CT--A
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           11764 20 +     61070 AAGATG-ATGGG------A-A-AA---GA---CT--A
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       2046 17 +     49596 AA---A-ATTGG------A-A-TT---GA---AT--A
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4955242 17 -   8017169 GA---A-ATtag------a-a-ca---ta---at--a
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    17099 17 -     36578 GA---A-AATAG------A-A-AA---TA---AT--A
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              2725 17 +      8220 GA---A-ACTGC------A-A-GA---GA---AT--G
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            99312  6 +    112873 AA---G-ATT---------------------------
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 I 17
s Platanista_gangetica.PlaMin_flattened_line_72990           9196 17 +     21690 GA---A-ACTGG------A-A-GA---GA---AT--G
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       25883 17 +     44506 GA---A-AATGA------A-A-AG---CA---AT--A
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        26096 17 +     67491 GA---A-AATGA------A-A-AG---CA---AT--A
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      16335 17 -     98129 GA---A-AATGA------A-A-AG---CA---AT--A
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     25936 17 +    147771 GA---A-AATGA------A-A-AG---CA---AT--A
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         2571 17 -     43940 GA---A-AATGA------A-A-AG---CA---AT--A
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          6654 17 -     55515 GA---A-AATGA------A-A-AG---CA---AT--A
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         26008 17 +    152463 GA---A-AATGA------A-A-AG---CA---AT--A
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       3816 17 -    119457 GA---A-AATGA------A-A-AG---CA---AT--A
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         15731 17 +    134592 GA---A-AATGA------A-A-AG---CA---AT--A
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          26318 17 -     75465 GA---A-AATGA------A-A-AG---CA---AT--A
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              190931 17 -    373494 ga---a-attga------a-a-ag---ca---AT--A
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19811578 17 +  19899266 GA---A-ATTGA------A-A-AG---CA---AT--A
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                3743 21 -      9567 GA---A-ACTGGT--T-GT-AACT---GA---AT--A
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6852550 17 +  12164890 GA---A-ATTGA------A-A-AA---GA---CT--A
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     21578 18 -     30946 ta---a-attga------a-a-aaa--aa---ct--a
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         7634 17 +     11805 TA---A-ATTGA------A-A-AA---AA---CT--A
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           46982 17 +     52369 TA---A-ATTGA------A-A-AA---AA---CT--A
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         39369 17 -     44753 TA---A-ATTGA------A-A-AA---AA---CT--A
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            21292 17 +     27322 TA---A-ATTGA------A-A-AA---AA---CT--A
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       20926 18 -     53241 TA---A-ATTGA------AAA-AA---AA---CT--A
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         43190 17 -     48185 TA---A-ACTGA------A-A-AA---AA---CT--A
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           38037  8 +     77221 GC---A-GTTgg-------------------------
i Psammomys_obesus.NESX01026517.1                       C 0 I 7
s Pteronotus_parnellii.KE867983.1                            5863  6 -     27784 CA---G-ACT---------------------------
i Pteronotus_parnellii.KE867983.1                       C 0 I 17
s Pteronura_brasiliensis.PteBra_flattened_line_1343        250102 17 -    344369 GA---A-ATTGG------A-A-AA---CA---AT--A
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Puma_concolor.QAVW01000427.1                          131539825 17 - 161321710 GA---A-ATTGG------A-A-AA---CA---GT--A
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                20292 17 +     68503 GA---A-ATGGG------A-A-GA---AA---AT--A
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13917443 17 +  90463843 ga---a-attaa------a-a-ca---ca---aa--a
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1792403 17 +   2252614 GA---A-ATTGA------A-A-GA---GA---AT--A
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                       702 17 -      4338 GA---A-ATGGG------A-A-GA---AA---AC--A
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15676340 17 -  43202129 ga---a-aatga------a-a-ag---ca---at--a
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        8253 17 +     34089 GA---A-AATGA------A-A-AG---CA---AT--A
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              8193 17 -     60842 GA---A-AATGA------A-A-AG---CA---AT--A
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              8287 17 +     67014 GA---A-AATGA------A-A-AG---CA---AT--A
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              8264 17 +     60816 GA---A-AATGA------A-A-AG---CA---AT--A
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 8201 17 -     76454 GA---A-AATGA------A-A-AG---CA---AT--A
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17344988 17 -  30362882 GA---A-AATGA------A-A-AG---GA---AT--A
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         24309 17 -     62485 GA---A-AATGA------A-A-AG---GA---AT--A
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   39434 17 -    114521 TA---A-AAGGG------A-A-AA---TA---GT--A
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  104805 17 -    120886 AA---A-ATTAG------A-A-CA---TC---CT--A
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            23360 17 +    739146 GA---A-ACTGG------A-A-AA---TA---AT--A
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17769816 17 -  27805282 aa---a-attgg------a-a-aa---ga---at--T
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2243851  9 +   2842873 GA---A-ATTAG------A------------------
i Spermophilus_dauricus.KZ294190.1                      C 0 I 5
s Spilogale_gracilis.SpiGra_flattened_line_905             238621 17 -    276980 GA---A-ATTGG------A-A-AA---CA---AT--A
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            33032 17 +     62062 GA---A-ATTGG------A-A-AA---CA---AT--A
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189274801 17 + 218635234 GA---A-ATTAG------A-A-GA---GA---AC--A
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        18601 17 -  13920577 GA---A-ATTGA------A-A-AA---CA---AT--A
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                2087  6 +     20549 ca---g-att---------------------------
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 I 17
s Tapirus_indicus.TapInd_scaffold_176                      810587 17 +   1148477 GA---A-ATAGG------A-A-AA---GA---AT--A
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  61229 17 +     99546 GA---A-ATAGG------A-A-AA---GA---AT--A
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               31174 17 +     42269 GA---A-ACTTT------A-A-AA---TA---AT--A
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               64483 17 +     65473 GA---A-ACTTT------A-A-AA---TA---AT--A
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194011721 17 - 194193292 GA---A-ATTGA------A-A-AG---CA---AT--A
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  137861  6 -    259118 ca---g-act---------------------------
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 I 17
s Tragulus_javanicus.TraJav_scaffold_14717                   9324 17 +     90398 GG---A-ATTGG------A-A-GA---GA---AT--A
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16089636 21 +  31416278 GA---A-ATTGAT-AT--T-AAAT---GA---AT--A
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2797557 12 -   3938065 ga---a-atgag------a-a-aa-------------
i Tupaia_chinensis.KB320831.1                           C 0 I 2
s Tupaia_tana.TupTan_flattened_line_68454                    9486 12 +     13056 GA---A-ATGAG------A-A-AA-------------
i Tupaia_tana.TupTan_flattened_line_68454               C 0 I 2
s Tursiops_truncatus.MRVK01000923.1                      69316989 17 -  96451834 GA---A-ACTGC------A-A-GA---GA---AT--A
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   9960 15 +     10241 GA---A-ATTGG------A-A-AA---TA---A----
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6520286 17 +  28682327 GA---A-ATcgg------a-a-aa---ca---ac--a
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  9192 17 -     20643 GA---A-ATTGA------A-A-AA---GA---CT--A
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             28727 17 -     33872 GA---A-ATTGA------A-A-AA---GA---CT--A
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1528022 17 -   2331223 GA---A-TCTGG------A-A-GA---GA---AT--A
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                144213 17 -    281493 GA---A-ATTGG------A-A-AA---CA---AT--A
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       131347 20 -    134049 GA---A-ATTGG------A-A-AA----A-AAAAACA
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        219668 17 -    227762 GA---A-ATTGG------A-A-AA---CA---AT--A
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_256618                      284 17 -      2259 GA---A-ATTGG------A-A-TA---TA---AT--A
i Zapus_hudsonius.ZapHud_scaffold_256618                C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            1733 17 -     13665 GA---A-ACTGG------A-A-GA---GA---AT--G
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Dinomys_branickii.DinBra_scaffold_1996                   158442 1030 +    228994 I
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           4051 456 -      6963 I
e Ochotona_princeps.JH802095.1                            4999348 675 -  23139505 I
e Tamandua_tetradactyla.TamTet_scaffold_26877               16259 379 +     45698 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             6589 379 -      8794 I
e Kogia_breviceps.KogBre_flattened_line_35920               27132 184 +     37189 I
e Hyaena_hyaena.HyaHya_flattened_line_20729                 22998  0 -     67322 C
e Elephantulus_edwardii.JH947210.1                        7830035 1277 +  15467074 I
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Echinops_telfairi.JH980316.1                           22999931  2 -  44670279 I
e Dasypus_novemcinctus.JH568778.1                          185121 383 -   6883506 I
e Choloepus_hoffmanni.KN194586.1                           763329 503 +    964067 I
e Choloepus_didactylus.ChoDid_scaffold_36182                18024 504 -     21363 I
e Trachypithecus_pileatus.k141_1022309                       5226  0 +     13828 C
e Trachypithecus_phayrei.ctg3                            44662914  0 -  44834318 C
e Trachypithecus_obscurus.k141_1115109                       8130  0 -     28054 C
e Trachypithecus_melamera.k141_699241                        2986  0 -     24393 C
e Trachypithecus_leucocephalus.k141_381681                   3005  0 +     12481 C
e Trachypithecus_laotum.k141_760702                          4719  0 +     14371 C
e Trachypithecus_hatinhensis.k141_504423                     6067  0 -     15592 C
e Trachypithecus_germaini.k141_868450                        3883  0 -     11566 C
e Trachypithecus_geei.k141_670367                           46082  0 -     54611 C
e Trachypithecus_francoisi.k141_768164                       4689  0 -     14244 C
e Trachypithecus_cristatus.k141_1011511                      5261  0 -     12939 C
e Trachypithecus_crepusculus.k141_1588528                   23360  0 -     32910 C
e Trachypithecus_auratus.k141_738098                        29800  0 +     38948 C
e Semnopithecus_vetulus.k141_1143185                        16479  0 +     30600 C
e Semnopithecus_schistaceus.k141_387461                     33457  0 +     42640 C
e Semnopithecus_priam.k141_410937                           40312  0 +     46263 C
e Semnopithecus_johnii.k141_785014                         121532  0 +    130994 C
e Semnopithecus_hypoleucos.k141_761524                      11528  0 +     20762 C
e Semnopithecus_entellus.k141_1572367                        6153  0 +     15331 C
e Rhinopithecus_strykeri.ctg4                            44859307  0 -  45163003 C
e Rhinopithecus_bieti.k119_554384                            2917  0 -     17045 C
e Pygathrix_nigripes_a.k141_101123                             8537  0 +     18040 C
e Pygathrix_nigripes_b.ctg79                                 6809148  0 +   6970761 C
e Pygathrix_cinerea.k141_374971                             32651  0 +     56732 C
e Presbytis_mitrata.k141_860013                              8661  0 +     14865 C
e Presbytis_comata.k141_672698                               8546  0 -     15069 C
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000036.1               26743271  0 +  26888534 C
e Piliocolobus_kirkii.k141_929665                            4788  0 +      7694 C
e Piliocolobus_gordonorum.k141_1270531                       5421  0 -     17985 C
e Piliocolobus_badius.k141_1987485                           4802  0 -      5908 C
e Octodon_degus.JH651621.1                                3687420 1881 +  10294119 I
e Nasalis_larvatus.k141_153429                              11264  0 +     48152 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     91920 1922 -    117718 I
e Hystrix_cristata.HysCri_scaffold_50788                     7688 1865 +     22540 I
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 32592 1717 -     67205 I
e Colobus_polykomos.k141_1406057                            19335  0 +     23629 C
e Colobus_guereza.LG08                                  147667351  0 + 156195979 C
e Colobus_angolensis.KN985967.1                          10889423  0 +  10971483 C
e Chinchilla_lanigera.JH721867.1                         15963245 964 +  43084221 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               17342  9 +    209709 G-CA-----A-A-A-T---G-C
s Acinonyx_jubatus.LLWD01000356.1                         2039317  8 +   3721120 G-GA-----A-G-A-A---G--
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    117567  6 -    189883 -----------AAA-A---A-T
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 3 I 2
s Ailuropoda_melanoleuca.LNAT01000321.1                  10663009  8 +  23371972 g-ca-----a-a-a-a---g--
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7099797  8 -  16596857 G-CA-----A-G-A-A---G--
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   21524  9 -     22067 G-CA-----A-C-C-T---G-T
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   5214  9 -     60446 G-CA-----A-A-A-T---G-C
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         5931  9 -     29318 G-CA-----A-A-A-T---G-C
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         4869  9 +     38766 G-CA-----A-A-A-T---G-C
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          5825  9 -     80423 G-CA-----A-A-A-T---G-C
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                               797  9 +     19852 G-CA-----A-A-A-T---G-C
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                3053  9 -     12443 G-CA-----A-A-A-T---G-C
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                              352  9 +      5070 G-CA-----A-A-A-T---G-C
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                   97  9 -      1641 G-CA-----A-A-A-T---G-C
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          2836  9 -     24210 G-CA-----A-A-A-T---G-C
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           29418  9 -     30219 G-CA-----A-A-A-T---G-C
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_405616                              5254  9 +     16794 G-CA-----A-A-A-T---G-C
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                             386  9 -      1470 G-CA-----A-A-A-T---G-C
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             4531  9 -      9835 G-CA-----A-A-A-T---G-C
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3525317  8 +   4113121 G-CA-----A-A-A-A---C--
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      392323  6 -    631301 ---a-----a-a-a-t---a--
i Anoura_caudifer.AnoCau_scaffold_422                   I 17 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             2748  8 +     55446 G-CC-----T-T-A-A---C--
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 66144  9 +     78111 G-CA-----A-A-A-T---G-C
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            9090  9 +     22701 G-CA-----A-A-A-T---G-C
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5753048  9 +   9889416 g-cA-----A-A-A-T---G-C
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             9646  9 -    104377 G-CA-----A-A-A-T---G-C
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               9653  9 +     23246 G-CA-----A-A-A-T---G-C
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     2184  9 +     11424 G-CA-----A-A-A-T---G-C
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        6270  9 +      9265 G-CA-----A-A-A-T---G-C
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                10747  6 -     29036 ---a-----a-a-a-t---a--
i Artibeus_jamaicensis.ArtJam_scaffold_41619            I 17 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9542939  9 +  39197703 A-CA-----A-A-A-T---G-C
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             64212  9 +     85812 A-CA-----A-A-A-T---G-C
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                15225  9 +     89302 A-CA-----A-A-A-T---G-C
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             19726  9 -     58268 A-CA-----A-A-A-T---G-C
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             67720  9 +    119057 A-CA-----A-A-A-T---G-C
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               9689  9 -     25888 A-CA-----A-A-A-T---G-C
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                10745  9 -     16375 G-CA-----A-A-A-T---A-T
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               4361  9 +      6337 G-CA-----A-A-A-T---A-T
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26383792  8 +  51448160 G-CA-----A-A-A-A---G--
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        8965  8 -     13118 G-CA-----A-A-A-A---G--
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   47779  8 -     72089 G-CA-----A-A-A-A---C--
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   301923  8 -   6870073 g-cA-----A-A-A-A---C--
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22956021  8 + 161108492 g-cA-----A-A-A-A---C--
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     418286  8 +    998990 g-cA-----A-A-A-A---C--
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22664675  8 + 158972876 g-cA-----A-A-A-A---C--
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               674438  8 +   1914593 g-cA-----A-A-A-A---C--
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               117591  9 -    171031 G-CA-----A-A-A-T---G-C
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 16611  9 +    125063 G-CA-----A-A-A-T---G-C
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                18658  9 -    216513 G-CA-----A-A-A-T---G-C
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       11201  9 -    134917 G-CA-----A-A-A-T---G-C
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3222929  8 -   8989139 G-CA-----G-A-G-A---G--
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           400631  8 -  15254737 G-CA-----G-A-G-A---G--
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2976367  8 +   6889770 G-CA-----G-A-G-A---G--
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11526150  8 +  39901454 G-CA-----A-G-A-G---G--
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   21124  8 +     87036 G-CA-----A-G-A-G---G--
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11272833  8 -  35597290 G-CA-----A-G-A-G---G--
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11095544  8 +  39895921 G-CA-----A-G-A-G---G--
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16462329  8 -  44759192 G-CA-----A-G-A-G---G--
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21330397  8 + 157394656 G-CA-----A-A-A-G---C--
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135711614  8 - 157403528 G-CA-----A-A-A-G---C--
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          313334  9 +    345090 C-CA-----A-A-A-T---A-C
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               61533  6 +     67245 ---a-----a-a-a-t---a--
i Carollia_perspicillata.CarPer_scaffold_4436           I 17 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   162460  8 -    276539 G-CA-----A-A-A-C---A--
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15789465  9 -  24422027 G-CA-----A-A-C-T---G-C
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15801404  9 -  24440124 G-CA-----A-A-C-T---G-C
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       179576  9 +    436027 G-CA-----A-A-C-T---G-C
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18894424  9 -  29618158 G-CA-----A-A-A-T---G-C
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                11968  9 -     26817 G-CA-----A-A-A-T---G-C
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                16212  9 +     25043 G-CA-----A-A-A-T---G-C
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                        12338  9 +     21754 T-CA-----A-A-A-T---A-C
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4367367  8 +   7569818 G-CA-----A-A-A-A---A--
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         7124  8 -      9338 G-CA-----A-A-A-A---A--
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6559155  9 +   6739814 G-CA-----A-A-A-T---G-C
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      30632  9 +     60454 G-CA-----A-A-A-T---G-C
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          5836  9 -     21101 G-CA-----A-A-A-T---G-C
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         63146  9 -    107033 G-CA-----A-A-A-T---G-C
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        6009  9 -     17608 G-CA-----A-A-A-T---G-C
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          3174  9 +     45019 G-CA-----A-A-A-T---G-C
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           3234  9 +     15177 G-CA-----A-A-A-T---G-C
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          6056  9 +     16677 G-CA-----A-A-A-T---G-C
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           28246  9 +     35983 G-CA-----A-A-A-T---G-C
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11994777  9 +  12117833 G-CA-----A-A-A-T---G-C
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46481538  9 +  46592721 G-CA-----A-A-A-T---G-C
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      45087  9 -     45581 G-CA-----A-A-A-T---G-C
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       6070  9 +     35577 G-CA-----A-A-A-T---G-C
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        5864  9 -     25661 G-CA-----A-A-A-T---G-C
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        5821  9 -     17744 G-CA-----A-A-A-T---G-C
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        25405  9 +     37128 G-CA-----A-A-A-T---G-C
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           62969  9 -     68416 G-CA-----A-A-A-T---A-T
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                           12075  9 +     13308 G-CA-----A-A-A-T---A-C
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             9251  9 -     18223 G-CA-----A-A-A-T---G-C
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                               990  9 +    188999 G-CA-----A-A-A-T---G-C
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           45288  9 +     57117 G-CA-----A-A-A-T---G-C
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          49968  9 +     54541 G-CA-----A-A-A-T---G-C
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chiropotes_israelita.k141_1189915                         74770  9 +    196370 G-CA-----A-A-A-T---G-C
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          18951  9 +     40510 G-CA-----A-A-A-T---G-C
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15143590  9 -  15256731 G-CA-----A-A-A-T---G-C
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      38054  9 -     53260 G-CA-----A-A-A-T---G-C
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101148613  9 + 101219884 G-CA-----A-A-A-T---G-C
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_629495              2022  9 -      3120 G-AA-----A-A-A-T---A-T
i Chrysochloris_asiatica.ChrAsi_scaffold_629495         C 0 C 0
s Condylura_cristata.JH655880.1                          60621992  3 +  78930452 g-ca------------------
i Condylura_cristata.JH655880.1                         C 0 I 4
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         2004  9 -      5782 G-CA-----A-A-AAT---C--
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 282436  9 -    399297 G-AA-----A-A-A-A---G-C
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 I 2
s Cricetulus_griseus.LT883672.1                          53034801 12 +  72327488 g-aa-----a-aaa-a-ata-t
i Cricetulus_griseus.LT883672.1                         C 0 I 2
s Crocidura_indochinensis.CroInd_scaffold_27484              1415  9 -     22648 G-CA-----AAA-A-T---A--
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            57311  8 -     70449 G-CA-----A-G-A-A---A--
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  214191  7 -    956709 G-AA-----A-A-C-T------
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                20637  9 +     26546 G-CA-----A-A-C-T---G-C
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             61777  9 -    236241 G-CA-----A-A-C-T---G-C
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16848904  9 +  31942871 G-CA-----A-A-A-T---A-C
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80040417  8 -  96802777 G-CA-----A-A-A-A---G--
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18700954  6 -  18957592 ---a-----a-a-a-t---a--
i Desmodus_rotundus.KZ672188.1                          I 17 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 326014  8 +    993696 G-CA-----A-A-A-A---C--
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   6655  8 +    151128 G-CA-----A-A-A-A---A--
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dipodomys_ordii.KN672545.1                              3659972  9 +   4240102 T-CA-----A-A-A-T---A-C
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  2320  9 -     11986 T-CA-----A-A-A-T---A-C
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                39744  9 -     73477 G-CA-----A-A-T-T---G-C
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1495995  8 +   1727528 g-ca-----a-a-a-a---c--
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        243602  4 -    369425 G-AA-----A------------
i Ellobius_lutescens.LOEQ01003611.1                     C 0 I 7
s Ellobius_talpinus.LOJH01198462.1                           1344  4 -      1901 G-AA-----A------------
i Ellobius_talpinus.LOJH01198462.1                      C 0 I 7
s Enhydra_lutris.KZ291749.1                              85877268  8 +  99434291 G-CA-----A-G-A-A---G--
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4708712  6 +   6522550 ---a-----a-a-a-t---a--
i Eptesicus_fuscus.JH977687.1                           I 17 C 0
s Equus_asinus.JREZ01000062.1                             5856380  8 -   7175178 G-CA-----A-A-A-A---G--
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13354880  8 +  41866177 G-CA-----A-A-A-A---G--
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          16370  8 +     92910 g-CA-----A-A-A-A---G--
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11540831  9 +  16010500 G-CA-----GGA-A-G---C--
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48780623  9 -  48907691 G-CA-----A-A-A-T---G-C
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          318635  8 +    330699 G-CA-----A-A-A-A---G--
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             65092  8 +     89355 G-CA-----A-A-A-A---G--
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              9057  9 +     13586 G-CA-----A-A-A-T---A-C
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_1015201                              2320  9 -      4292 G-AA-----A-A-A-T---A-C
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            15453  9 +     36558 G-AA-----A-A-G-T---A-C
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            11778  9 +     60246 G-AA-----A-A-A-T---A-C
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                15261  9 +    109717 G-CA-----A-A-A-T---A-C
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 3246  9 -     19505 G-AA-----A-A-A-T---A-C
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                19918  9 +     27497 G-CA-----A-A-A-T---A-C
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           22374  9 +     26808 G-CA-----A-A-G-T---A-C
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                37109  9 +     46535 G-AA-----A-A-A-T---A-C
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              19848  9 -     29447 G-CA-----A-A-A-T---A-C
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.AANG03133801.1                                  363  8 -       736 G-GA-----A-G-A-A---G--
i Felis_catus.AANG03133801.1                            C 0 C 0
s Felis_catus_fca126.CM031420.1                         129285712  8 - 158578461 G-GA-----A-G-A-A---G--
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 26811  8 +     52776 G-GA-----A-G-A-A---G--
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13895926  9 -  19261668 G-CA-----A-A-A-T---G-T
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     215111  9 -    847004 G-TG-----A-A-A-T---G-C
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           17472  9 -     43889 G-TG-----A-A-A-T---G-C
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          14615  9 +     27357 G-TG-----A-A-A-T---G-C
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               159356  9 +    324696 G-CA-----A-A-A-T---G-C
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    185793  8 -    189561 g-cA-----A-A-A-A---C--
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           16248  9 -     18683 G-CA-----A-A-A-T---G-C
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               9046  9 -     14630 G-CA-----A-A-A-T---G-C
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119656146  9 - 195582420 G-CA-----A-A-A-T---G-C
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         5841  9 +     10286 G-CA-----A-A-A-T---A-C
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             4319  9 -     11661 G-CA-----A-A-A-T---A-C
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             9646  9 +     56096 G-CA-----A-A-A-T---A-C
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        32895  9 -     42470 G-CA-----A-A-A-T---A-C
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        49521  9 -     54384 G-CA-----A-A-A-C---A-C
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              22452  8 +     53719 G-AA-----A-G-A-A---G--
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                32664  8 -     91191 G-CA-----A-A-A-A---C--
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2560443  9 +  31725842 g-ca-----a-a-a-t---g-c
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               62658  9 +     73687 G-CA-----A-A-A-G---A-T
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              150415  8 +    277961 G-CA-----A-A-A-A---G--
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      282820  9 -    477199 g-cA-----A-A-AAG---C--
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959                589 10 +     26078 G-CA-----A-AAAAG---C--
i Hipposideros_galeritus.HipGal_scaffold_52959          C 0 C 0
s Hoolock_leuconedys.ctg315                                   350044  9 +    431944 G-CA-----A-A-A-T---G-C
i Hoolock_leuconedys.ctg315                                C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           21032  9 -    119109 G-CA-----A-A-T-T---G-C
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_1816750                             1525  9 +      3202 G-CA-----A-A-A-T---G-C
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1633646                              1495  9 -      2102 G-CA-----A-A-A-T---G-C
i Hylobates_agilis.k141_1633646                         C 0 C 0
s Hylobates_klossii.k141_468230                              3012  9 +      5464 G-CA-----A-A-A-T---G-C
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14628360  9 -  25970782 G-CA-----A-A-A-T---G-C
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                             911  9 +      4161 G-CA-----A-A-A-T---G-C
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             36468  9 -     60944 G-CA-----A-A-A-T---G-C
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7130160  9 +  13083262 G-CA-----A-A-A-T---G-C
i Ictidomys_tridecemlineatus.JH393315.1                 I 5 C 0
s Indri_indri.k141_2197838                                   1318  9 +      3484 G-CA-----A-A-A-T---A-T
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              12629  8 +     17520 G-CA-----A-A-A-G---G--
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8577217  9 +  11848649 G-CA-----A-C-C-T---G-T
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Lagothrix_lagothricha.k141_12968                          53808  9 -    147782 G-CA-----A-A-A-T---G-C
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    5329  6 +     26176 ---a-----a-a-a-t---a--
i Lasiurus_borealis.LasBor_scaffold_59542               I 17 C 0
s Lemur_catta.scaffold_1                                258411193  9 - 285822530 G-CA-----A-A-A-T---A-C
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        28496  9 +     39228 G-CA-----A-A-A-T---A-C
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            57860  9 +     63517 G-CA-----A-A-A-T---A-C
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        36240  9 -     38897 G-CA-----A-A-A-T---A-C
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      2286  9 -     13103 G-CA-----A-A-A-T---A-C
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3091232  8 -   3498232 G-CA-----A-G-A-A---G--
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    20651  9 +     22452 A-CA-----A-A-A-C---G-T
i Lepus_americanus.LepAme_scaffold_62849                C 0 I 6
s Lipotes_vexillifer.KE558548.1                            139563  8 +   3060487 G-CA-----A-A-A-A---G--
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19252243  9 +  19376315 G-CA-----A-A-A-T---G-C
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           15059  9 +     84689 G-CA-----A-A-A-C---A-C
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3782798  9 +   6799190 G-CA-----A-A-A-C---A-C
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20598583  9 -  62548349 G-CA-----A-G-A-G---A-T
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11095000  8 +  39895028 G-CA-----A-G-A-G---G--
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             23994  9 +     74745 G-CA-----A-A-A-T---G-C
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12710455  9 +  12821369 G-CA-----A-A-A-T---G-C
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                3029  9 -     26467 G-CA-----A-A-A-T---G-C
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           50900  9 +     63263 G-CA-----A-A-A-T---G-C
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 3010  9 -     26361 G-CA-----A-A-A-T---G-G
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 6200  9 -      7381 G-CA-----A-A-A-T---G-C
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  49429  9 -     79256 G-CA-----A-A-A-T---G-C
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196039527  9 + 196197964 G-CA-----A-A-A-T---G-C
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11449697  9 +  11645122 G-CA-----A-A-A-T---G-C
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   8383  9 -     46448 G-TA-----A-A-A-T---G-C
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                6045  9 -     13212 G-CA-----A-A-A-T---G-C
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 19726  9 -     55006 G-CA-----A-A-A-T---G-C
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43844841  9 +  43892939 G-CA-----A-A-A-T---G-C
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               21009  9 -     24607 G-CA-----A-A-A-T---G-C
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               8380  9 -     27140 G-CA-----A-A-A-T---G-C
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43441416  9 -  43563597 G-CA-----A-A-A-T---G-C
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4454220  9 -   4543643 G-CA-----A-A-A-T---G-C
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            151997  8 +    252755 G-CA-----A-A-A-A---T--
i Manis_javanica.JSZB01003966.1                         I 3 C 0
s Manis_pentadactyla.KN017078.1                             39586  8 +     58827 G-CA-----A-A-A-A---T--
i Manis_pentadactyla.KN017078.1                         I 3 C 0
s Marmota_marmota.CZRN01000005.1                         36878029  9 +  64221397 G-CA-----A-A-A-T---G-C
i Marmota_marmota.CZRN01000005.1                        I 5 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       65226  9 -    234502 C-CA-----A-A-AAT---C--
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             6151  8 -     87323 G-CA-----A-G-A-A---G--
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 1055  6 +    115071 -----------AAA-A---A-G
i Meriones_unguiculatus.MerUng_scaffold_9483            I 7 I 2
s Mesocricetus_auratus.KB708139.1                         1051324  6 -  26018355 G-AA-----A-A-A--------
i Mesocricetus_auratus.KB708139.1                       C 0 I 4
s Mesoplodon_bidens.MesBid_scaffold_96348                    2218  8 -     12939 G-CA-----T-A-A-A---G--
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16514256  9 +  47401472 C-CA-----A-A-A-T---A-C
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  41270  8 -     48017 ---A-----A-C-A-G---AAC
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               24707  6 -     32043 ---a-----a-a-a-t---a--
i Micronycteris_hirsuta.MicHir_scaffold_37978           I 17 C 0
s Microtus_ochrogaster.CM001673.1                        22824405  5 -  98408828 gaaa-----a------------
i Microtus_ochrogaster.CM001673.1                       I 394 I 7
s Miniopterus_natalensis.LDJU01000022.1                   8212772  6 +  10048721 ---a-----a-a-a-t---a--
i Miniopterus_natalensis.LDJU01000022.1                 I 17 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            37262  6 +     45743 ---a-----a-a-a-t---a--
i Miniopterus_schreibersii.MinSch_scaffold_24116        I 17 C 0
s Miopithecus_ogouensis.k141_2935907                         5962  9 +     29742 G-CA-----A-A-A-T---G-C
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        16728  8 -    104932 G-CA-----A-G-A-A---G--
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     4936  9 -     12809 C-CA-----A-A-A-T---A-C
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 150010  8 +    154973 G-CA-----A-A-A-A---G--
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                163242  6 +    265003 ---a-----a-a-a-t---a--
i Mormoops_blainvillei.MorMeg_scaffold_2952             I 17 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  6013  8 -     19904 G-CA-----A-A-A-A---G--
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  150133  4 -    168139 -----------G-A-A---G--
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          24182  6 -    100666 ---a-----a-a-a-t---a--
i Murina_feae.MurFea_scaffold_2254                      I 17 C 0
s Mus_caroli.LT608236.1                                  70771629 11 +  92629107 g-g------a-aaa-a-atg-t
i Mus_caroli.LT608236.1                                 C 0 I 2
s Mus_musculus.chr16                                     75493683 11 +  98207768 g-g------a-aaa-a-atg-t
i Mus_musculus.chr16                                    C 0 I 2
s Mus_pahari.LT608305.1                                  67560058 11 +  89017189 g-g------a-aaa-a-atg-t
i Mus_pahari.LT608305.1                                 C 0 I 2
s Mus_spretus.CM004110.1                                 74336408 12 +  97876770 g-G------A-AAA-ATATG-T
i Mus_spretus.CM004110.1                                C 0 I 2
s Muscardinus_avellanarius.MusAve_scaffold_9643             14659  9 +     98495 T-CT-----A-A-A-T---T-C
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4427996  8 -  28371801 G-CA-----A-G-A-A---G--
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myotis_brandtii.KE161952.1                               971052  6 +   8389877 ---a-----a-a-a-t---a--
i Myotis_brandtii.KE161952.1                            I 17 C 0
s Myotis_davidii.KB114863.1                               5022473  6 +   6462685 ---a-----a-a-a-t---a--
i Myotis_davidii.KB114863.1                             I 17 C 0
s Myotis_lucifugus.GL429887.1                             3468556  6 -   3747815 ---a-----a-a-a-t---a--
i Myotis_lucifugus.GL429887.1                           I 17 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        13797  6 +     66751 ---a-----a-a-a-t---a--
i Myotis_myotis.MyoMyo_scaffold_6123                    I 17 C 0
s Nannospalax_galili.KL201303.1                            120160  9 +    362372 G-TA-----A-A-A-T---C-C
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4490127  7 -  14209539 G--A-----A-G-A-A---G--
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3954601  8 -   4490290 G-CA-----A-A-A-A---G--
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  50337  6 +     94413 ---a-----g-a-a-t---a--
i Noctilio_leporinus.NocLep_scaffold_12062              I 17 C 0
s Nomascus_annamensis.k141_762468                              30  9 -      2755 G-CA-----A-A-A-T---G-C
i Nomascus_annamensis.k141_762468                       C 0 C 0
s Nomascus_concolor.k141_70405                                651  9 +      1153 G-CA-----A-A-A-T---G-C
i Nomascus_concolor.k141_70405                          C 0 C 0
s Nomascus_gabriellae.k141_1400361                            581  9 -      2203 G-CA-----A-A-A-T---G-C
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_1022                             605  9 -     11638 G-CA-----A-A-A-T---G-C
i Nomascus_siki_b.tarseq_1022                       C 0 C 0
s Nomascus_siki_a.k141_421408                                   495  9 +     16235 G-CA-----A-A-A-T---G-C
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                37865  8 +   3668941 G-CA-----A-G-A-A---G--
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65571622  9 -  95554990 G-CA-----A-A-A-C---A-C
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_771591                            15031  9 +     16181 G-CA-----A-A-A-C---A-C
i Nycticebus_coucang.k141_771591                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65679818  9 +  89412551 G-CA-----A-A-A-C---A-C
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Odobenus_rosmarus.KB229369.1                             684829  8 -   3126709 g-CA-----A-G-A-A---G--
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1083445  8 +   1425656 g-ca-----a-a-a-a---C--
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         41528  8 +     78940 g-ca-----a-a-a-a---C--
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  130202  4 +    145789 G-AA-----A------------
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 I 7
s Onychomys_torridus.OnyTor_scaffold_12578                  42893 11 +     62360 GGAA-----A-AAA-A---A-T
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 I 2
s Orcinus_orca.KB316965.1                                 7228277  8 -   7562323 G-CA-----A-A-A-A---G--
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              64056  9 -     66828 T-CA-----A-T-A-G---A-T
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141883667  9 + 163896628 A-CA-----A-A-A-C---G-T
i Oryctolagus_cuniculus.CM000803.1                      C 0 I 6
s Otocyon_megalotis.JAEUCK010005121.1                      315003  8 -    505867 G-CA-----A-G-A-G---G--
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        4971  9 -     53940 G-TG-----A-A-A-T---G-C
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18012944  9 -  38779656 G-TG-----A-A-A-T---G-C
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134082450  8 - 275406953 G-CA-----A-A-A-A---C--
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      83685  8 +    140051 G-CA-----A-A-A-A---C--
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127578325  9 - 205426864 G-CA-----A-A-A-T---G-C
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120155485  9 - 196562556 G-CA-----A-A-A-T---G-C
i Pan_troglodytes.CM009241.2                            I 17 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  39731  8 +    295523 G-GA-----A-G-A-A---G--
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3643546  8 +  18214204 G-GA-----A-G-A-A---G--
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5033194  8 -   6340057 G-GA-----A-G-A-A---G--
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1071326  8 -   1292953 G-CA-----A-A-A-A---C--
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188160205  9 - 188283584 G-CA-----A-A-A-T---G-C
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              3295  9 +     25005 G-CA-----A-A-A-T---G-C
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47517577  9 +  47705337 G-CA-----A-A-A-T---G-C
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 71568  9 -    104429 G-CA-----A-A-A-T---G-C
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   10100  9 +     14967 G-CA-----A-A-A-T---G-C
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 5965  9 -      7628 G-CA-----A-A-A-T---G-C
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    121229  8 -    135482 G-CA-----A-G-A-A---G--
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          10644  9 -     23713 G-CA-----A-A-A-T---G-C
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           11784  9 +     61070 G-CA-----A-A-A-T---G-C
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       2063  9 +     49596 T-CA-----A-A-A-T---A-C
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4955259  7 -   8017169 ---------a-aaa-a---a-t
i Peromyscus_maniculatus.KI615518.1                     C 0 I 2
s Petromus_typicus.PetTyp_scaffold_33007                    17116  9 -     36578 G-CA-----A-A-A-T---T-C
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              2742  8 +      8220 G-CA-----A-A-A-A---G--
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            99335  6 +    112873 ---A-----A-A-A-T---A--
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        I 17 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           9213  8 +     21690 G-CA-----A-A-A-A---G--
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       25900  9 +     44506 G-CA-----A-A-A-T---G-C
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        26113  9 +     67491 G-CA-----A-A-A-T---G-C
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      16352  9 -     98129 G-CA-----A-A-A-T---G-C
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     25953  9 +    147771 G-CA-----A-A-A-T---G-C
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         2588  9 -     43940 G-CA-----A-A-A-T---G-C
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          6671  9 -     55515 G-CA-----A-A-A-T---G-C
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         26025  9 +    152463 G-CA-----A-A-A-T---G-C
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       3833  9 -    119457 G-CA-----A-A-A-T---G-C
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         15748  9 +    134592 G-CA-----A-A-A-T---G-C
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          26335  9 -     75465 G-CA-----A-A-A-T---G-C
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              190948  9 -    373494 G-CA-----A-A-A-T---G-C
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19811595  9 +  19899266 G-CA-----A-A-A-T---G-C
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                3764  9 -      9567 G-CA-----A-A-A-G---A-T
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6852567  9 +  12164890 G-CA-----A-A-A-T---A-C
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     21596  9 -     30946 g-ca-----a-a-a-t---a-t
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         7651  9 +     11805 G-CA-----A-A-A-T---A-T
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           46999  2 +     52369 T-C-------------------
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         39386  2 -     44753 T-C-------------------
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            21309  2 +     27322 T-C-------------------
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       20944  9 -     53241 G-CA-----A-A-A-T---A-T
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         43207  9 -     48185 G-CA-----A-A-A-T---A-T
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           38052  4 +     77221 -------------a-a---a-g
i Psammomys_obesus.NESX01026517.1                       I 7 I 2
s Pteronotus_parnellii.KE867983.1                            5886  6 -     27784 ---a-----a-a-a-t---a--
i Pteronotus_parnellii.KE867983.1                       I 17 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        250119  8 -    344369 G-CA-----A-G-A-A---G--
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Puma_concolor.QAVW01000427.1                          131539842  8 - 161321710 G-GA-----A-G-A-A---G--
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                20309  8 +     68503 G-CA-----A-A-A-A---C--
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13917460 10 +  90463843 g-ga-----a-aaa-a---g-t
i Rattus_norvegicus.chr11                               C 0 I 2
s Rhinolophus_sinicus.LVEH01000179.1                      1792420  9 +   2252614 G-CA-----A-A-AAG---C--
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                       719  8 -      4338 G-CA-----A-A-A-A---C--
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15676357  9 -  43202129 g-cA-----A-A-A-T---G-C
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        8270  9 +     34089 G-CA-----A-A-A-T---G-C
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              8210  9 -     60842 G-CA-----A-A-A-T---G-C
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              8304  9 +     67014 G-CA-----A-A-A-T---G-C
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              8281  9 +     60816 G-CA-----A-A-A-T---G-C
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 8218  9 -     76454 G-CA-----A-A-A-T---G-C
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17345005  9 -  30362882 G-CA-----A-A-A-T---G-C
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         24326  9 -     62485 G-CA-----A-A-A-T---G-C
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   39451  8 -    114521 G-CA-----A-A-A-A---G--
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  104822  9 -    120886 G-A------A-CGG-A---A-T
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 I 2
s Solenodon_paradoxus.SolPar_flattened_line_1012            23377  3 +    739146 G-CC------------------
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 I 3
s Sorex_araneus.JH798170.1                               17769833  8 -  27805282 A-CA-----A-A-A-T---A--
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2243865  9 +   2842873 G-CA-----A-A-A-T---G-C
i Spermophilus_dauricus.KZ294190.1                      I 5 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             238638  8 -    276980 G-CA-----A-G-A-A---G--
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            33049  4 +     62062 -----------G-A-A---G--
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189274818  8 + 218635234 G-CA-----A-A-C-C---A--
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        18618  9 -  13920577 G-CA-----A-A-A-T---G-C
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                2110  6 +     20549 ---a-----a-a-a-t---a--
i Tadarida_brasiliensis.TadBra_scaffold_61492           I 17 C 0
s Tapirus_indicus.TapInd_scaffold_176                      810604  8 +   1148477 G-CA-----A-A-A-A---G--
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  61246  8 +     99546 G-CA-----A-A-A-A---G--
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               31191  9 +     42269 T-CA-----A-A-A-C---A-C
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               64500  9 +     65473 T-CA-----A-A-A-C---A-C
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194011738  9 - 194193292 G-CA-----A-A-A-T---G-C
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  137884  6 -    259118 ---a-----a-a-a-t---a--
i Tonatia_saurophila.TonSau_scaffold_3334               I 17 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   9341 13 +     90398 G-TAAGAAAA-A-A-A---A--
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16089657  9 +  31416278 A-CA-----A-A-A-A---A-T
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2797571  9 -   3938065 a-ca-----a-a-a-c---a-c
i Tupaia_chinensis.KB320831.1                           I 2 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    9500  9 +     13056 G-CA-----A-A-A-T---A-C
i Tupaia_tana.TupTan_flattened_line_68454               I 2 C 0
s Tursiops_truncatus.MRVK01000923.1                      69317006  8 -  96451834 G-CA-----A-A-A-A---G--
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   9975  7 +     10241 --CA-----A-A-A-T---A--
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6520303  8 +  28682327 g-ca-----a-a-a-a---g--
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  9209  9 -     20643 G-CA-----A-A-A-T---A-C
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             28744  9 -     33872 G-CA-----A-A-A-T---A-C
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1528039  8 -   2331223 G-CA-----G-A-G-A---G--
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                144230  8 -    281493 G-CA-----A-G-A-G---G--
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       131367  9 -    134049 G-CA-----A-A-A-C---G-T
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        219685  8 -    227762 G-CA-----A-G-A-A---G--
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_256618                      301  9 -      2259 G-CA-----A-C-G-T---G-C
i Zapus_hudsonius.ZapHud_scaffold_256618                C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            1750  8 -     13665 G-CA-----A-A-A-A---G--
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Dinomys_branickii.DinBra_scaffold_1996                   158442 1030 +    228994 I
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           4051 456 -      6963 I
e Ochotona_princeps.JH802095.1                            4999348 675 -  23139505 I
e Tamandua_tetradactyla.TamTet_scaffold_26877               16259 379 +     45698 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             6589 379 -      8794 I
e Kogia_breviceps.KogBre_flattened_line_35920               27132 184 +     37189 I
e Hyaena_hyaena.HyaHya_flattened_line_20729                 22998  0 -     67322 C
e Elephantulus_edwardii.JH947210.1                        7830035 1277 +  15467074 I
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Echinops_telfairi.JH980316.1                           22999931  2 -  44670279 I
e Dasypus_novemcinctus.JH568778.1                          185121 383 -   6883506 I
e Choloepus_hoffmanni.KN194586.1                           763329 503 +    964067 I
e Choloepus_didactylus.ChoDid_scaffold_36182                18024 504 -     21363 I
e Trachypithecus_pileatus.k141_1022309                       5226  0 +     13828 C
e Trachypithecus_phayrei.ctg3                            44662914  0 -  44834318 C
e Trachypithecus_obscurus.k141_1115109                       8130  0 -     28054 C
e Trachypithecus_melamera.k141_699241                        2986  0 -     24393 C
e Trachypithecus_leucocephalus.k141_381681                   3005  0 +     12481 C
e Trachypithecus_laotum.k141_760702                          4719  0 +     14371 C
e Trachypithecus_hatinhensis.k141_504423                     6067  0 -     15592 C
e Trachypithecus_germaini.k141_868450                        3883  0 -     11566 C
e Trachypithecus_geei.k141_670367                           46082  0 -     54611 C
e Trachypithecus_francoisi.k141_768164                       4689  0 -     14244 C
e Trachypithecus_cristatus.k141_1011511                      5261  0 -     12939 C
e Trachypithecus_crepusculus.k141_1588528                   23360  0 -     32910 C
e Trachypithecus_auratus.k141_738098                        29800  0 +     38948 C
e Semnopithecus_vetulus.k141_1143185                        16479  0 +     30600 C
e Semnopithecus_schistaceus.k141_387461                     33457  0 +     42640 C
e Semnopithecus_priam.k141_410937                           40312  0 +     46263 C
e Semnopithecus_johnii.k141_785014                         121532  0 +    130994 C
e Semnopithecus_hypoleucos.k141_761524                      11528  0 +     20762 C
e Semnopithecus_entellus.k141_1572367                        6153  0 +     15331 C
e Rhinopithecus_strykeri.ctg4                            44859307  0 -  45163003 C
e Rhinopithecus_bieti.k119_554384                            2917  0 -     17045 C
e Pygathrix_nigripes_a.k141_101123                             8537  0 +     18040 C
e Pygathrix_nigripes_b.ctg79                                 6809148  0 +   6970761 C
e Pygathrix_cinerea.k141_374971                             32651  0 +     56732 C
e Presbytis_mitrata.k141_860013                              8661  0 +     14865 C
e Presbytis_comata.k141_672698                               8546  0 -     15069 C
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000036.1               26743271  0 +  26888534 C
e Piliocolobus_kirkii.k141_929665                            4788  0 +      7694 C
e Piliocolobus_gordonorum.k141_1270531                       5421  0 -     17985 C
e Piliocolobus_badius.k141_1987485                           4802  0 -      5908 C
e Octodon_degus.JH651621.1                                3687420 1881 +  10294119 I
e Nasalis_larvatus.k141_153429                              11264  0 +     48152 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     91920 1922 -    117718 I
e Hystrix_cristata.HysCri_scaffold_50788                     7688 1865 +     22540 I
e Graphiurus_murinus.GraMur_scaffold_4493                   79590 10 +    118900 I
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 32592 1717 -     67205 I
e Colobus_polykomos.k141_1406057                            19335  0 +     23629 C
e Colobus_guereza.LG08                                  147667351  0 + 156195979 C
e Colobus_angolensis.KN985967.1                          10889423  0 +  10971483 C
e Chinchilla_lanigera.JH721867.1                         15963245 964 +  43084221 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               17351 10 +    209709 T---------------T-CG-------ACA-----------G-A---------A
s Acinonyx_jubatus.LLWD01000356.1                         2039325 11 +   3721120 C---------------TTTG-------ACA-----------G-A---------A
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    117575 15 -    189883 TTTGATTA-ACAATC-T-------------------------------------
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 2 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10663017 11 +  23371972 c---------------tTTG-------GCA-----------G-A---------A
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7099805 11 -  16596857 C---------------TTTG-------GCA-----------G-A---------A
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   21533 14 -     22067 TTTGAT-A--GAAACAT-------------------------------------
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   5223 10 -     60446 T---------------T-TG-------ACA-----------G-A---------A
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         5940 10 -     29318 T---------------T-TG-------ACA-----------G-A---------A
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         4878 10 +     38766 T---------------T-TG-------ACA-----------G-A---------A
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          5834 10 -     80423 T---------------T-TG-------ACA-----------G-A---------A
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                               806 10 +     19852 C---------------T-TG-------ATA-----------G-A---------A
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                3062 10 -     12443 C---------------T-TG-------ATA-----------G-A---------A
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                              361 10 +      5070 C---------------T-TG-------ATA-----------G-A---------A
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                  106 10 -      1641 C---------------T-TG-------ATA-----------G-A---------A
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          2845 10 -     24210 C---------------T-TG-------ATA-----------G-A---------A
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           29427 10 -     30219 C---------------T-TG-------ATA-----------G-A---------A
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_405616                              5263 10 +     16794 C---------------T-TG-------ATA-----------G-A---------A
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                             395 10 -      1470 C---------------T-TG-------ATA-----------G-A---------A
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             4540 10 -      9835 C---------------T-TG-------ATA-----------G-A---------A
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3525325 11 +   4113121 T---------------TTTG-------ACA-----------G-A---------A
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      392329 10 -    631301 t---------------t-tg-------gaa-----------a-a---------a
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             2756 11 +     55446 C---------------TTTG-------ACA-----------G-A---------A
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 66153 10 +     78111 T---------------T-TG-------ACA-----------G-A---------A
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            9099 10 +     22701 T---------------T-TG-------ACA-----------G-A---------A
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5753057 10 +   9889416 T---------------T-TG-------ACA-----------G-A---------A
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             9655 10 -    104377 T---------------T-TG-------ACA-----------G-A---------A
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               9662 10 +     23246 T---------------T-TG-------ACA-----------G-A---------A
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     2193  2 +     11424 T---------------T-------------------------------------
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 I 14
s Arctocebus_calabarensis.k141_587554                        6279 10 +      9265 T---------------T-TG-------ACA-----------A-A---------A
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                10753 10 -     29036 t---------------t-tg-------gaa-----------a-a---------a
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9542948 10 +  39197703 T---------------T-TG-------ACA-----------G-A---------A
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             64221 10 +     85812 T---------------T-TG-------ACA-----------G-A---------A
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                15234 10 +     89302 T---------------T-TG-------ACA-----------G-A---------A
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             19735 10 -     58268 T---------------T-TG-------ACA-----------G-A---------A
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             67729 10 +    119057 T---------------T-TG-------ACA-----------G-A---------A
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               9698 10 -     25888 T---------------T-TG-------ACA-----------G-A---------A
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                10754 10 -     16375 T---------------T-TG-------ATA-----------A-A---------A
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               4370 10 +      6337 T---------------T-TG-------ACA-----------A-A---------A
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26383800 11 +  51448160 C---------------TTTG-------ACA-----------G-A---------A
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        8973 11 -     13118 C---------------TTTG-------ACA-----------G-A---------A
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   47787 11 -     72089 C---------------TTTG-------ACA-----------G-A---------A
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   301931 11 -   6870073 C---------------TTTG-------ACA-----------G-A---------A
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22956029 11 + 161108492 C---------------TTTG-------ACA-----------G-A---------A
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     418294 11 +    998990 C---------------TTTG-------ACA-----------G-A---------A
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22664683 11 + 158972876 C---------------TTTG-------ACA-----------G-A---------A
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               674446 11 +   1914593 C---------------TTTG-------ACA-----------T-A---------A
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               117600 10 -    171031 T---------------T-TG-------ACA-----------G-A---------A
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 16620 10 +    125063 T---------------T-TG-------ACA-----------G-A---------A
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                18667 10 -    216513 T---------------T-TG-------ACA-----------G-A---------A
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       11210 10 -    134917 T---------------T-TG-------ACA-----------G-A---------A
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3222937 11 -   8989139 C---------------TTTG-------ACA-----------G-A---------A
i Camelus_bactrianus.KN276303.1                         C 0 I 1
s Camelus_dromedarius.KN271192.1                           400639 11 -  15254737 C---------------TTTG-------ACA-----------G-A---------A
i Camelus_dromedarius.KN271192.1                        C 0 I 1
s Camelus_ferus.KB016973.1                                2976375 11 +   6889770 C---------------TTTG-------ACA-----------G-A---------A
i Camelus_ferus.KB016973.1                              C 0 I 1
s CanFam4.chr31                                          11526158 11 +  39901454 C---------------TTTG-------ACA-----------G-A---------A
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   21132 11 +     87036 C---------------TTTG-------ACA-----------G-A---------A
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11272841 11 -  35597290 C---------------TTGG-------ACG-----------G-A---------A
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11095552 11 +  39895921 C---------------TTTG-------ACA-----------G-A---------A
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16462337 11 -  44759192 C---------------TTTG-------ACA-----------G-A---------A
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21330405 11 + 157394656 T---------------TTTG-------ACA-----------G-A---------A
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135711622 11 - 157403528 T---------------TTTG-------ACA-----------G-A---------A
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          313343 10 +    345090 T---------------T-TC-------ACA-----------A-A---------A
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               61539 10 +     67245 t---------------t-tg-------gaa-----------a-a---------a
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   162468 11 -    276539 T---------------TTTG-------ACA-----------G-A---------A
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15789474  2 -  24422027 T---------------T-------------------------------------
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15801413  2 -  24440124 T---------------T-------------------------------------
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       179585  2 +    436027 T---------------T-------------------------------------
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18894433 10 -  29618158 T---------------T-TG-------ACA-----------G-A---------A
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                11977 10 -     26817 T---------------T-TG-------ACA-----------G-A---------A
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                16221 10 +     25043 T---------------T-TG-------ACA-----------G-A---------A
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                        12347 21 +     21754 T---------------T-TC-------ACAAAAAATTATTTA-T---------T
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4367375 11 +   7569818 C---------------TTTG-------ACA-----------G-A---------A
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         7132 11 -      9338 C---------------TTTG-------ACA-----------G-A---------A
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6559164 10 +   6739814 T---------------T-TG-------ACA-----------G-A---------A
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      30641 10 +     60454 T---------------T-TG-------ACA-----------G-A---------A
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          5845 10 -     21101 T---------------T-TG-------ACA-----------G-A---------A
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         63155 10 -    107033 T---------------T-TG-------ACA-----------G-A---------A
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        6018 10 -     17608 T---------------T-TG-------ACA-----------G-A---------A
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          3183 10 +     45019 T---------------T-TG-------ACA-----------G-A---------A
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           3243 10 +     15177 T---------------T-TG-------ACA-----------G-A---------A
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          6065 10 +     16677 T---------------T-TG-------ACA-----------G-A---------A
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           28255 10 +     35983 T---------------T-TG-------ACA-----------G-A---------A
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11994786 10 +  12117833 T---------------T-TG-------ACA-----------G-A---------A
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46481547 10 +  46592721 T---------------T-TG-------ACA-----------G-A---------A
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      45096 10 -     45581 T---------------T-TG-------ACA-----------G-A---------A
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       6079 10 +     35577 T---------------T-TG-------ACA-----------G-A---------A
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        5873 10 -     25661 T---------------T-TG-------ACA-----------G-A---------A
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        5830 10 -     17744 T---------------T-TG-------ACA-----------G-A---------A
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        25414 10 +     37128 T---------------T-TG-------ACA-----------G-A---------A
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           62978 10 -     68416 T---------------T-TG-------ACA-----------A-A---------A
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                           12084 10 +     13308 T---------------T-TG-------ACA-----------A-A---------A
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             9260 10 -     18223 T---------------T-TG-------ACA-----------G-A---------A
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                               999 10 +    188999 T---------------T-TG-------ACA-----------G-A---------A
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           45297 10 +     57117 T---------------T-TG-------ACA-----------G-A---------A
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          49977 10 +     54541 T---------------T-TG-------ACA-----------G-A---------A
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chiropotes_israelita.k141_1189915                         74779 10 +    196370 T---------------T-TG-------ACA-----------G-A---------A
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          18960 10 +     40510 T---------------T-TG-------ACA-----------G-A---------A
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15143599 10 -  15256731 T---------------T-TG-------ACA-----------G-A---------A
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      38063 10 -     53260 T---------------T-TG-------ACA-----------G-A---------A
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101148622 10 + 101219884 T---------------T-TG-------ACA-----------G-A---------A
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_629495              2031 10 -      3120 T---------------C-TG-------ACA-----------G-A---------A
i Chrysochloris_asiatica.ChrAsi_scaffold_629495         C 0 C 0
s Condylura_cristata.JH655880.1                          60621999 10 +  78930452 t---------------t-tt-------ACT-----------G-A---------A
i Condylura_cristata.JH655880.1                         I 4 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         2013 20 -      5782 T---------------T-TG-------ATAA----------A-AAGAAAAAAAA
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 282447 15 -    399297 TTTGATCA-GCAATC-T-------------------------------------
i Cricetomys_gambianus.CriGam_scaffold_949              I 2 C 0
s Cricetulus_griseus.LT883672.1                          53034815 15 +  72327488 tttgacCA-GAAATT-T-------------------------------------
i Cricetulus_griseus.LT883672.1                         I 2 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              1424  9 -     22648 T---------------G-C--------ATA-----------G-A---------C
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            57319 11 -     70449 C---------------TTTG-------ACA-----------G-A---------A
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  214198  2 -    956709 T---------------T-------------------------------------
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                20646  2 +     26546 T---------------T-------------------------------------
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             61786  2 -    236241 C---------------T-------------------------------------
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16848913 10 +  31942871 T---------------T-TG-------ACA-----------A-T---------A
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80040425 11 -  96802777 C---------------TTTG-------ACA-----------G-A---------A
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18700960 10 -  18957592 t---------------t-tg-------gag-----------a-a---------a
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 326022 11 +    993696 C---------------TTTG-------ACA-----------G-A---------A
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   6663 11 +    151128 C---------------TTTG-------ACA-----------G-A---------A
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dipodomys_ordii.KN672545.1                              3659981  2 +   4240102 T---------------T-------------------------------------
i Dipodomys_ordii.KN672545.1                            C 0 I 15
s Dipodomys_stephensi.DipSte_scaffold_84338                  2329  2 -     11986 T---------------T-------------------------------------
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 I 15
s Dolichotis_patagonum.DolPat_scaffold_14102                39753  2 -     73477 T---------------T-------------------------------------
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1496003 11 +   1727528 C---------------TTTG-------ACA-----------G-A---------A
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        243613 15 -    369425 TTTGACCA--GAATTGC-------------------------------------
i Ellobius_lutescens.LOEQ01003611.1                     I 7 C 0
s Ellobius_talpinus.LOJH01198462.1                           1355 15 -      1901 TTTGAGCA--GAATTGC-------------------------------------
i Ellobius_talpinus.LOJH01198462.1                      I 7 C 0
s Enhydra_lutris.KZ291749.1                              85877276 12 +  99434291 C---------------TTTA-------GCA-----------GGA---------A
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4708718 17 +   6522550 t---------------t-tgg------ggg-----------g-g---gggggaa
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5856388 11 -   7175178 C---------------CTGG-------ACA-----------G-A---------A
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13354888 11 +  41866177 C---------------CTGG-------ACA-----------G-A---------A
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          16378 11 +     92910 C---------------CTGG-------ACA-----------G-A---------A
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11540840  9 +  16010500 T---------------T-T--------ATA-----------G-A---------A
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48780632 10 -  48907691 T---------------T-TG-------ACA-----------G-A---------A
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          318643 11 +    330699 C---------------TTTG-------ACA-----------G-A---------A
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             65100 11 +     89355 C---------------TTTG-------ACA-----------G-A---------A
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              9066 10 +     13586 T---------------T-TG-------ACA-----------A-A---------A
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_1015201                              2329 10 -      4292 T---------------T-TG-------ACA-----------A-A---------A
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            15462 10 +     36558 T---------------T-TG-------ACA-----------A-A---------A
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            11787 10 +     60246 T---------------T-TG-------ACA-----------A-A---------A
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                15270 10 +    109717 T---------------T-TG-------ACA-----------A-A---------A
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 3255 10 -     19505 T---------------T-TG-------ACA-----------A-A---------A
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                19927 10 +     27497 T---------------T-TG-------ACA-----------A-A---------A
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           22383 10 +     26808 T---------------T-TG-------ACA-----------A-A---------A
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                37118 10 +     46535 T---------------T-TG-------ACA-----------A-A---------A
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              19857 10 -     29447 T---------------T-TG-------ACA-----------A-A---------A
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.AANG03133801.1                                  371 11 -       736 C---------------TTTG-------ACA-----------G-A---------A
i Felis_catus.AANG03133801.1                            C 0 C 0
s Felis_catus_fca126.CM031420.1                         129285720 11 - 158578461 C---------------TTTG-------ACA-----------G-A---------A
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 26819 11 +     52776 C---------------TTTG-------ACA-----------G-A---------A
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13895935  2 -  19261668 T---------------T-------------------------------------
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     215120 10 -    847004 T---------------T-TG-------ACA-----------A-A---------A
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           17481 10 -     43889 T---------------T-TG-------ACA-----------A-A---------A
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          14624 10 +     27357 T---------------T-TA-------ACA-----------A-A---------A
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               159365 10 +    324696 T---------------T-TG-------ATA-----------C-A---------A
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    185801 11 -    189561 C---------------TCTG-------ACA-----------G-A---------A
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           16257  2 -     18683 T---------------T-------------------------------------
i Glis_glis.GliGli_scaffold_79770                       C 0 I 14
s Gorilla_beringei.k141_111300                               9055 10 -     14630 T---------------T-CG-------ACA-----------G-A---------A
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119656155 10 - 195582420 T---------------T-CG-------ACA-----------G-A---------A
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         5850 10 +     10286 T---------------T-TG-------ACA-----------A-A---------A
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             4328 10 -     11661 T---------------T-TG-------ACA-----------A-A---------A
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             9655 10 +     56096 T---------------T-TG-------ACA-----------A-A---------A
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        32904 10 -     42470 T---------------T-TG-------ACA-----------A-A---------A
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        49530 10 -     54384 T---------------T-TG-------ACA-----------A-A---------A
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              22460 11 +     53719 C---------------TTTG-------ACA-----------G-A---------A
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                32672 11 -     91191 C---------------TTTG-------ACA-----------G-A---------A
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2560452  2 +  31725842 t---------------t-------------------------------------
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               62667 10 +     73687 T---------------T-TG-------ACA-----------G-A---------A
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              150423 11 +    277961 C---------------TTTG-------ACA-----------G-A---------A
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      282829 11 -    477199 T---------------T-TG-------GCAA----------A-A---------A
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959                599 11 +     26078 T---------------T-TG-------GCAA----------A-A---------A
i Hipposideros_galeritus.HipGal_scaffold_52959          C 0 C 0
s Hoolock_leuconedys.ctg315                                   350053 10 +    431944 T---------------T-CG-------ACA-----------G-A---------A
i Hoolock_leuconedys.ctg315                                C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           21041  2 -    119109 T---------------T-------------------------------------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_1816750                             1534 10 +      3202 T---------------T-CG-------ACA-----------G-A---------A
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1633646                              1504 10 -      2102 T---------------T-CG-------AAA-----------G-A---------A
i Hylobates_agilis.k141_1633646                         C 0 C 0
s Hylobates_klossii.k141_468230                              3021 10 +      5464 T---------------T-CG-------ACA-----------G-A---------A
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14628369 10 -  25970782 T---------------T-CG-------ACA-----------G-A---------A
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                             920 10 +      4161 T---------------T-CG-------ACA-----------G-A---------A
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             36477 10 -     60944 T---------------T-CG-------ACA-----------G-A---------A
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7130169  2 +  13083262 T---------------T-------------------------------------
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 I 14
s Indri_indri.k141_2197838                                   1327 10 +      3484 T---------------T-TG-------ACA-----------A-A---------A
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              12637 11 +     17520 C---------------TTTG-------ACA-----------G-A---------A
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8577226 14 +  11848649 TTTTAT-A--GAAACAT-------------------------------------
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Lagothrix_lagothricha.k141_12968                          53817 10 -    147782 T---------------T-TG-------ACA-----------G-A---------A
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    5335 17 +     26176 t---------------t-tt------taaa-----------a-a---aagaaaa
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258411202 10 - 285822530 T---------------T-TG-------ACA-----------A-A---------A
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        28505 10 +     39228 T---------------T-TG-------ACA-----------A-A---------A
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            57869 10 +     63517 T---------------T-TG-------ACA-----------A-A---------A
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        36249 10 -     38897 T---------------T-TG-------ACA-----------A-A---------A
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      2295 10 -     13103 T---------------T-TG-------ACA-----------A-A---------A
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3091240 11 -   3498232 C---------------TTTG-------ACA-----------G-A---------A
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    20666  4 +     22452 -----------------------------A-----------G-A---------A
i Lepus_americanus.LepAme_scaffold_62849                I 6 C 0
s Lipotes_vexillifer.KE558548.1                            139571 11 +   3060487 C---------------TTTG-------ACA-----------G-A---------A
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19252252 10 +  19376315 T---------------T-TG-------ACA-----------G-A---------A
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           15068 10 +     84689 T---------------T-TA-------ATA-----------A-A---------A
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3782807 10 +   6799190 T---------------T-TA-------ATA-----------A-A---------A
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20598592 10 -  62548349 T---------------G-TG-------ACA-----------G-A---------A
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11095008 11 +  39895028 C---------------TTTG-------ACA-----------G-A---------A
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             24003 10 +     74745 T---------------T-TG-------ACA-----------G-A---------A
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12710464 10 +  12821369 T---------------T-TG-------ACA-----------G-A---------A
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                3038 10 -     26467 T---------------T-TG-------ACA-----------G-A---------A
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           50909 10 +     63263 T---------------T-TG-------ACA-----------G-A---------A
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 3019 10 -     26361 T---------------T-TG-------ACA-----------G-A---------A
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 6209 10 -      7381 T---------------T-TG-------ACA-----------G-A---------A
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  49438 10 -     79256 T---------------T-TG-------ACA-----------G-A---------A
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196039536 10 + 196197964 T---------------T-TG-------ACA-----------G-A---------A
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11449706 10 +  11645122 T---------------T-TG-------ACA-----------G-A---------A
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   8392 10 -     46448 T---------------T-TG-------ACA-----------G-A---------A
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                6054 10 -     13212 T---------------T-TG-------ACA-----------G-A---------A
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 19735 10 -     55006 T---------------T-TG-------ACA-----------G-A---------A
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43844850 10 +  43892939 T---------------T-TG-------ACA-----------G-A---------A
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               21018 10 -     24607 T---------------T-TG-------ACA-----------G-A---------A
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               8389 10 -     27140 T---------------T-TG-------ACA-----------G-A---------A
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43441425 10 -  43563597 T---------------T-TG-------ACA-----------G-A---------A
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4454229 10 -   4543643 T---------------T-TG-------ACA-----------G-A---------A
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            152005 11 +    252755 C---------------TTTG-------ACA-----------G-A---------G
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             39594 11 +     58827 C---------------TTTG-------ACA-----------G-A---------A
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36878038  2 +  64221397 T---------------T-------------------------------------
i Marmota_marmota.CZRN01000005.1                        C 0 I 14
s Megaderma_lyra.MegLyr_scaffold_3562                       65235 20 -    234502 T---------------C-TG-------ACC----------aa-aaaaaaaaaaa
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 I 150
s Mellivora_capensis.MelCap_flattened_line_15433             6159 12 -     87323 C---------------TTTA-------GCA-----------GGA---------A
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 1063 15 +    115071 TTTTATTA-GCAATC-T-------------------------------------
i Meriones_unguiculatus.MerUng_scaffold_9483            I 2 C 0
s Mesocricetus_auratus.KB708139.1                         1051334 15 -  26018355 TTTGACCA-GAAATC-T-------------------------------------
i Mesocricetus_auratus.KB708139.1                       I 4 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    2226 11 -     12939 C---------------TTTG-------ACA-----------G-A---------A
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16514265 10 +  47401472 T---------------T-TG-------ACA-----------A-A---------A
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  41278 10 -     48017 T---------------A-TG-------AGA-----------G-A---------T
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               24713 10 -     32043 c---------------t-tg-------aaa-----------a-a---------a
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22824417 15 -  98408828 tttgaccA-GAAATG-C-------------------------------------
i Microtus_ochrogaster.CM001673.1                       I 7 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8212778 10 +  10048721 t---------------t-tg-------aaa-----------a-a---------a
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            37268 10 +     45743 t---------------t-tg-------aaa-----------a-a---------a
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         5971 10 +     29742 T---------------T-TG-------ACA-----------G-A---------A
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        16736 11 -    104932 C---------------TTTG-------ACA-----------G-A---------A
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     4945 10 -     12809 T---------------T-TG-------ACA-----------A-A---------A
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 150018 11 +    154973 C---------------TTTG-------ACA-----------G-A---------A
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                163248 10 +    265003 t---------------t-tg-------aaa-----------a-a---------a
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  6021 11 -     19904 C---------------TTTG-------ACA-----------G-A---------A
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  150137 11 -    168139 C---------------TTTG-------ACA-----------G-A---------A
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          24188 11 -    100666 t---------------t-tg--a----aaa-----------t-a---------a
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70771642 15 +  92629107 tTTGTTTA-GTAATC-T-------------------------------------
i Mus_caroli.LT608236.1                                 I 2 C 0
s Mus_musculus.chr16                                     75493696 15 +  98207768 TTTGCTTA-GTaatc-t-------------------------------------
i Mus_musculus.chr16                                    I 2 C 0
s Mus_pahari.LT608305.1                                  67560071 15 +  89017189 tttgttta-gtAATC-t-------------------------------------
i Mus_pahari.LT608305.1                                 I 2 C 0
s Mus_spretus.CM004110.1                                 74336422 15 +  97876770 TTTGCTTA-Gtaatc-t-------------------------------------
i Mus_spretus.CM004110.1                                I 2 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             14668  2 +     98495 T---------------T-------------------------------------
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 I 10
s Mustela_putorius.JH417978.1                             4428004 12 -  28371801 C---------------TTTA-------GCA-----------GGA---------A
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myotis_brandtii.KE161952.1                               971058 11 +   8389877 t---------------t-tgg------aaa-----------a-a---------a
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5022479 11 +   6462685 t---------------t-tgg------aaa-----------a-a---------a
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3468562 11 -   3747815 t---------------t-tgg------aaa-----------a-a---------a
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        13803 11 +     66751 t---------------t-tgg------aaa-----------a-a---------a
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Nannospalax_galili.KL201303.1                            120169 15 +    362372 TTTGAT-AGAAAATT-C-------------------------------------
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4490134 11 -  14209539 C---------------TTTG-------ACA-----------G-A---------A
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3954609 11 -   4490290 C---------------TTTG-------ACA-----------G-A---------A
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  50343 10 +     94413 t---------------t-tg-------aaa-----------a-a---------a
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_762468                              39 10 -      2755 T---------------T-CG-------ACA-----------G-A---------A
i Nomascus_annamensis.k141_762468                       C 0 C 0
s Nomascus_concolor.k141_70405                                660 10 +      1153 T---------------T-CG-------ACA-----------G-A---------A
i Nomascus_concolor.k141_70405                          C 0 C 0
s Nomascus_gabriellae.k141_1400361                            590 10 -      2203 T---------------T-CG-------ACA-----------G-G---------A
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_1022                             614 10 -     11638 T---------------T-CG-------ACA-----------G-A---------A
i Nomascus_siki_b.tarseq_1022                       C 0 C 0
s Nomascus_siki_a.k141_421408                                   504 10 +     16235 T---------------T-CG-------ACA-----------G-A---------A
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                37873 11 +   3668941 C---------------TTTG-------ACA-----------G-A---------A
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65571631 10 -  95554990 T---------------T-TA-------ACA-----------A-A---------A
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_771591                            15040 10 +     16181 T---------------T-TA-------ACA-----------A-A---------A
i Nycticebus_coucang.k141_771591                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65679827 10 +  89412551 T---------------T-TA-------ACA-----------A-A---------A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Odobenus_rosmarus.KB229369.1                             684837 11 -   3126709 C---------------TTTG-------ACA-----------G-A---------A
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1083453 11 +   1425656 C---------------TTTG-------ACA-----------G-A---------A
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         41536 11 +     78940 C---------------TCTG-------ACA-----------G-A---------A
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  130213 15 +    145789 TTTGACCA-GAAATG-T-------------------------------------
i Ondatra_zibethicus.OndZib_scaffold_6821               I 7 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  42906 14 +     62360 TTTAACTA--GAAAC-T-------------------------------------
i Onychomys_torridus.OnyTor_scaffold_12578              I 2 C 0
s Orcinus_orca.KB316965.1                                 7228285 11 -   7562323 C---------------TTTG-------ACA-----------G-A---------A
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              64065 10 -     66828 T---------------T-TG-------ACA-----------G-A---------A
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141883682  4 + 163896628 -----------------------------A-----------G-A---------A
i Oryctolagus_cuniculus.CM000803.1                      I 6 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      315011 11 -    505867 C---------------TTTG-------ACA-----------G-A---------A
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        4980 10 -     53940 T---------------T-TG-------ACA-----------A-A---------A
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18012953 10 -  38779656 T---------------T-TG-------ACA-----------A-A---------A
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134082458 11 - 275406953 C---------------TTTG-------ACA-----------G-A---------A
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      83693 11 +    140051 C---------------TTTG-------ACA-----------G-A---------A
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127578334 10 - 205426864 T---------------T-CG-------ACA-----------G-A---------A
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120155494 10 - 196562556 T---------------T-CG-------ACA-----------G-A---------A
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  39739 11 +    295523 C---------------TTTG-------ACA-----------G-A---------A
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3643554 11 +  18214204 C---------------TTTG-------ACA-----------G-A---------A
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5033202 11 -   6340057 C---------------TTTG-------ACA-----------G-A---------A
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1071334 11 -   1292953 C---------------TTTG-------ACA-----------G-A---------A
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188160214 10 - 188283584 T---------------T-TG-------ACA-----------G-A---------A
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              3304 10 +     25005 T---------------T-TG-------ACA-----------G-A---------A
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47517586 10 +  47705337 T---------------T-TG-------ACA-----------G-A---------A
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 71577 10 -    104429 T---------------T-TG-------ACA-----------G-A---------A
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   10109 10 +     14967 T---------------T-TG-------ACA-----------G-A---------A
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 5974 10 -      7628 T---------------T-TG-------ACA-----------G-A---------A
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    121237 11 -    135482 G---------------TTTG-------ACA-----------G-A---------A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          10653 10 -     23713 T---------------T-TG-------ACA-----------A-A---------A
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           11793 10 +     61070 T---------------T-TG-------ACA-----------A-A---------A
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       2072  2 +     49596 T---------------T-------------------------------------
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 I 16
s Peromyscus_maniculatus.KI615518.1                       4955268 15 -   8017169 tttaacta-gaaATA-T-------------------------------------
i Peromyscus_maniculatus.KI615518.1                     I 2 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    17125  2 -     36578 T---------------T-------------------------------------
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              2750 11 +      8220 C---------------TTTG-------ACA-----------G-A---------A
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            99341 17 +    112873 T---------------T-TT------GAAA-----------A-AA-ACAAA--A
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 I 3
s Platanista_gangetica.PlaMin_flattened_line_72990           9221 11 +     21690 C---------------TTTG-------ACA-----------G-A---------A
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       25909 10 +     44506 T---------------T-TG-------ACA-----------G-A---------A
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        26122 10 +     67491 T---------------T-TG-------ACA-----------G-A---------A
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      16361 10 -     98129 T---------------T-TG-------ACA-----------G-A---------A
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     25962 10 +    147771 T---------------T-TG-------ACA-----------G-A---------A
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         2597 10 -     43940 T---------------T-TG-------ACA-----------G-A---------A
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          6680 10 -     55515 T---------------T-TG-------ACA-----------G-A---------A
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         26034 10 +    152463 T---------------T-TG-------ACA-----------G-A---------A
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       3842 10 -    119457 T---------------T-TG-------ACA-----------G-A---------A
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         15757 10 +    134592 T---------------T-TG-------ACA-----------G-A---------A
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          26344 10 -     75465 T---------------T-TG-------ACA-----------G-A---------A
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              190957 10 -    373494 T---------------T-CG-------ACA-----------G-A---------A
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19811604 10 +  19899266 T---------------T-CG-------ACA-----------G-A---------A
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                3773 10 -      9567 T---------------T-TG-------ACA-----------G-A---------A
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6852576 10 +  12164890 T---------------T-TG-------ACA-----------A-A---------A
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     21605 10 -     30946 t---------------t-tg-------aca-----------a-a---------a
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         7660 10 +     11805 T---------------T-TG-------ACA-----------A-A---------A
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           47001  4 +     52369 -----------------------------A-----------A-A---------A
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         39388  4 -     44753 -----------------------------A-----------A-A---------A
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            21311  4 +     27322 -----------------------------A-----------A-A---------A
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       20953 10 -     53241 T---------------T-TG-------ACA-----------A-A---------A
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         43216 10 -     48185 T---------------T-TG-------ACA-----------A-A---------A
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           38058 15 +     77221 ttttatta-gCAATC-T-------------------------------------
i Psammomys_obesus.NESX01026517.1                       I 2 C 0
s Pteronotus_parnellii.KE867983.1                            5892 10 -     27784 t---------------t-tg-------aaa-----------a-a---------a
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        250127 12 -    344369 C---------------TTTA-------GCA-----------GGA---------A
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Puma_concolor.QAVW01000427.1                          131539850 11 - 161321710 C---------------TTTG-------ACA-----------G-A---------A
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                20317 11 +     68503 C---------------TTTG-------ACA-----------G-A---------A
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13917472 15 +  90463843 tTTGATCA-GTAATC-T-------------------------------------
i Rattus_norvegicus.chr11                               I 2 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1792429 11 +   2252614 T---------------T-TG-------ACAA----------A-A---------A
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                       727 11 -      4338 C---------------TTTG-------ACA-----------G-A---------A
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15676366 10 -  43202129 T---------------T-TG-------ACA-----------G-A---------A
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        8279 10 +     34089 T---------------T-TG-------ACA-----------G-A---------A
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              8219 10 -     60842 T---------------T-TG-------ACA-----------G-A---------A
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              8313 10 +     67014 T---------------T-TG-------ACA-----------G-A---------A
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              8290 10 +     60816 T---------------T-TG-------ACA-----------G-A---------A
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 8227 10 -     76454 T---------------T-TG-------ACA-----------G-A---------A
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17345014 10 -  30362882 T---------------T-TG-------ACA-----------G-A---------A
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         24335 10 -     62485 T---------------T-TG-------ACA-----------G-A---------A
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   39459 10 -    114521 T---------------T-TT-------ACA-----------G-A---------T
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  104833 15 -    120886 TTTGACCA-GAAATC-T-------------------------------------
i Sigmodon_hispidus.SigHis_scaffold_11332               I 2 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            23383 10 +    739146 T---------------T-TG-------ACA-----------G-A---------A
i Solenodon_paradoxus.SolPar_flattened_line_1012        I 3 C 0
s Sorex_araneus.JH798170.1                               17769841  9 -  27805282 T---------------C-T--------TTA-----------G-G---------T
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2243874  2 +   2842873 T---------------T-------------------------------------
i Spermophilus_dauricus.KZ294190.1                      C 0 I 14
s Spilogale_gracilis.SpiGra_flattened_line_905             238646 11 -    276980 C---------------TCTG-------GCA-----------G-A---------A
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            33053 11 +     62062 C---------------TTTG-------ACA-----------G-A---------A
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189274826 11 + 218635234 T---------------TTTG-------ACA-----------G-A---------A
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        18627 10 -  13920577 T---------------T-CG-------ACA-----------G-A---------A
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                2116 17 +     20549 t---------------t-tgggagggaaaa-----------a-a---------a
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      810612 11 +   1148477 C---------------TTGG-------ACA-----------G-A---------A
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  61254 11 +     99546 C---------------TTTG-------ACA-----------G-A---------A
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               31200 10 +     42269 T---------------T-TC-------ACA-----------A-A---------A
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               64509 10 +     65473 T---------------T-TC-------ACA-----------A-A---------A
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194011747 10 - 194193292 T---------------T-TG-------ACA-----------G-A---------A
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  137890  7 -    259118 t---------------t-tg-------gaa------------------------
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 I 2
s Tragulus_javanicus.TraJav_scaffold_14717                   9354 11 +     90398 C---------------TTTG-------ATA-----------C-A---------A
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16089666 10 +  31416278 T---------------T-TG-------ACA-----------G-A---------A
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2797580 10 -   3938065 t---------------t-TG-------CTA-----------G-A---------A
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    9509 10 +     13056 T---------------T-TG-------CTA-----------G-A---------A
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69317014 11 -  96451834 C---------------TTTG-------ACA-----------G-A---------A
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   9982 10 +     10241 T---------------G-TT-------ATA-----------G-A---------A
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6520311 11 +  28682327 c---------------tTTG-------GCA-----------G-A---------A
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  9218 10 -     20643 T---------------T-TC-------ACA-----------A-A---------A
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             28753 10 -     33872 T---------------T-TC-------ACA-----------A-A---------A
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1528047 11 -   2331223 C---------------TTTG-------ACA-----------G-A---------A
i Vicugna_pacos.KN269600.1                              C 0 I 1
s Vulpes_lagopus.VulLag_flattened_line_2045                144238 11 -    281493 C---------------TTTG-------ACA-----------G-A---------A
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       131376  2 -    134049 T---------------T-------------------------------------
i Xerus_inauris.XerIna_scaffold_7898                    C 0 I 14
s Zalophus_californianus.ZalCal_flattened_line_4097        219693 11 -    227762 C---------------TTTG-------ACA-----------G-A---------A
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_256618                      310 14 -      2259 CATGAT-A--GAAACAT-------------------------------------
i Zapus_hudsonius.ZapHud_scaffold_256618                C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            1758 11 -     13665 C---------------TTTG-------ACA-----------G-A---------A
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Dinomys_branickii.DinBra_scaffold_1996                   158442 1030 +    228994 I
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           4051 456 -      6963 I
e Ochotona_princeps.JH802095.1                            4999348 675 -  23139505 I
e Tamandua_tetradactyla.TamTet_scaffold_26877               16259 379 +     45698 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             6589 379 -      8794 I
e Kogia_breviceps.KogBre_flattened_line_35920               27132 184 +     37189 I
e Hyaena_hyaena.HyaHya_flattened_line_20729                 22998  0 -     67322 C
e Elephantulus_edwardii.JH947210.1                        7830035 1277 +  15467074 I
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Echinops_telfairi.JH980316.1                           22999931  2 -  44670279 I
e Dasypus_novemcinctus.JH568778.1                          185121 383 -   6883506 I
e Choloepus_hoffmanni.KN194586.1                           763329 503 +    964067 I
e Choloepus_didactylus.ChoDid_scaffold_36182                18024 504 -     21363 I
e Trachypithecus_pileatus.k141_1022309                       5226  0 +     13828 C
e Trachypithecus_phayrei.ctg3                            44662914  0 -  44834318 C
e Trachypithecus_obscurus.k141_1115109                       8130  0 -     28054 C
e Trachypithecus_melamera.k141_699241                        2986  0 -     24393 C
e Trachypithecus_leucocephalus.k141_381681                   3005  0 +     12481 C
e Trachypithecus_laotum.k141_760702                          4719  0 +     14371 C
e Trachypithecus_hatinhensis.k141_504423                     6067  0 -     15592 C
e Trachypithecus_germaini.k141_868450                        3883  0 -     11566 C
e Trachypithecus_geei.k141_670367                           46082  0 -     54611 C
e Trachypithecus_francoisi.k141_768164                       4689  0 -     14244 C
e Trachypithecus_cristatus.k141_1011511                      5261  0 -     12939 C
e Trachypithecus_crepusculus.k141_1588528                   23360  0 -     32910 C
e Trachypithecus_auratus.k141_738098                        29800  0 +     38948 C
e Semnopithecus_vetulus.k141_1143185                        16479  0 +     30600 C
e Semnopithecus_schistaceus.k141_387461                     33457  0 +     42640 C
e Semnopithecus_priam.k141_410937                           40312  0 +     46263 C
e Semnopithecus_johnii.k141_785014                         121532  0 +    130994 C
e Semnopithecus_hypoleucos.k141_761524                      11528  0 +     20762 C
e Semnopithecus_entellus.k141_1572367                        6153  0 +     15331 C
e Rhinopithecus_strykeri.ctg4                            44859307  0 -  45163003 C
e Rhinopithecus_bieti.k119_554384                            2917  0 -     17045 C
e Pygathrix_nigripes_a.k141_101123                             8537  0 +     18040 C
e Pygathrix_nigripes_b.ctg79                                 6809148  0 +   6970761 C
e Pygathrix_cinerea.k141_374971                             32651  0 +     56732 C
e Presbytis_mitrata.k141_860013                              8661  0 +     14865 C
e Presbytis_comata.k141_672698                               8546  0 -     15069 C
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000036.1               26743271  0 +  26888534 C
e Piliocolobus_kirkii.k141_929665                            4788  0 +      7694 C
e Piliocolobus_gordonorum.k141_1270531                       5421  0 -     17985 C
e Piliocolobus_badius.k141_1987485                           4802  0 -      5908 C
e Octodon_degus.JH651621.1                                3687420 1881 +  10294119 I
e Nasalis_larvatus.k141_153429                              11264  0 +     48152 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     91920 1922 -    117718 I
e Hystrix_cristata.HysCri_scaffold_50788                     7688 1865 +     22540 I
e Graphiurus_murinus.GraMur_scaffold_4493                   79590 10 +    118900 I
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 32592 1717 -     67205 I
e Colobus_polykomos.k141_1406057                            19335  0 +     23629 C
e Colobus_guereza.LG08                                  147667351  0 + 156195979 C
e Colobus_angolensis.KN985967.1                          10889423  0 +  10971483 C
e Chinchilla_lanigera.JH721867.1                         15963245 964 +  43084221 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               17361 2 +    209709 A-A
s Acinonyx_jubatus.LLWD01000356.1                         2039336 2 +   3721120 A-A
i Acinonyx_jubatus.LLWD01000356.1                       C 0 I 6
s Ailuropoda_melanoleuca.LNAT01000321.1                  10663028 2 +  23371972 A-A
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7099816 2 -  16596857 A-A
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   5233 2 -     60446 A-A
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         5950 2 -     29318 A-A
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         4888 2 +     38766 A-A
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          5844 2 -     80423 A-A
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                               816 2 +     19852 A-A
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                3072 2 -     12443 A-A
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                              371 2 +      5070 A-A
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                  116 2 -      1641 A-A
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          2855 2 -     24210 A-A
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           29437 2 -     30219 A-A
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_405616                              5273 2 +     16794 A-A
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                             405 2 -      1470 A-A
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             4550 2 -      9835 A-A
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3525336 2 +   4113121 A-A
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      392339 2 -    631301 a-G
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 I 50
s Antilocapra_americana.AntAmePen_scaffold_27338             2767 2 +     55446 A-A
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 66163 2 +     78111 A-A
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            9109 2 +     22701 A-A
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5753067 2 +   9889416 A-A
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             9665 2 -    104377 A-A
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               9672 2 +     23246 A-A
i Aotus_vociferans.k141_718647                          C 0 C 0
s Arctocebus_calabarensis.k141_587554                        6289 2 +      9265 T-A
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                10763 2 -     29036 a-G
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 I 50
s Ateles_geoffroyi_b.tarseq_2582                             9542958 2 +  39197703 A-A
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             64231 2 +     85812 A-A
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                15244 2 +     89302 A-A
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             19745 2 -     58268 A-A
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             67739 2 +    119057 A-A
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               9708 2 -     25888 A-A
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                10764 2 -     16375 T-A
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               4380 2 +      6337 T-A
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26383811 2 +  51448160 A-A
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        8984 2 -     13118 A-A
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   47798 2 -     72089 A-C
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   301942 2 -   6870073 A-A
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22956040 2 + 161108492 A-A
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     418305 2 +    998990 A-A
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22664694 2 + 158972876 A-A
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               674457 2 +   1914593 A-A
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               117610 2 -    171031 A-A
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 16630 2 +    125063 A-A
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                18677 2 -    216513 A-A
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       11220 2 -    134917 A-A
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3222949 2 -   8989139 A-A
i Camelus_bactrianus.KN276303.1                         I 1 C 0
s Camelus_dromedarius.KN271192.1                           400651 2 -  15254737 A-A
i Camelus_dromedarius.KN271192.1                        I 1 C 0
s Camelus_ferus.KB016973.1                                2976387 2 +   6889770 A-A
i Camelus_ferus.KB016973.1                              I 1 C 0
s CanFam4.chr31                                          11526169 3 +  39901454 ATA
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   21143 3 +     87036 ATA
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11272852 3 -  35597290 ATA
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11095563 3 +  39895921 ATA
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16462348 3 -  44759192 ATA
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21330416 2 + 157394656 A-A
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135711633 2 - 157403528 A-A
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          313353 2 +    345090 A-A
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               61549 2 +     67245 a-G
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 I 50
s Catagonus_wagneri.CatWag_scaffold_1305                   162479 2 -    276539 A-A
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18894443 2 -  29618158 A-A
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                11987 2 -     26817 A-A
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                16231 2 +     25043 A-A
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                        12368 2 +     21754 T-T
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4367386 2 +   7569818 A-A
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         7143 2 -      9338 A-A
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6559174 2 +   6739814 A-A
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      30651 2 +     60454 A-A
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          5855 2 -     21101 A-A
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         63165 2 -    107033 A-A
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        6028 2 -     17608 A-A
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          3193 2 +     45019 A-A
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           3253 2 +     15177 A-A
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          6075 2 +     16677 A-A
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           28265 2 +     35983 A-A
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11994796 2 +  12117833 A-A
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46481557 2 +  46592721 A-A
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      45106 2 -     45581 A-A
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       6089 2 +     35577 A-A
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        5883 2 -     25661 A-A
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        5840 2 -     17744 A-A
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        25424 2 +     37128 A-A
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           62988 2 -     68416 T-A
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                           12094 2 +     13308 T-A
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             9270 2 -     18223 A-A
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              1009 2 +    188999 A-A
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           45307 2 +     57117 A-A
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          49987 2 +     54541 A-A
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chiropotes_israelita.k141_1189915                         74789 2 +    196370 A-A
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          18970 2 +     40510 A-A
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15143609 2 -  15256731 A-A
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      38073 2 -     53260 A-A
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101148632 2 + 101219884 A-A
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_629495              2041 3 -      3120 GCT
i Chrysochloris_asiatica.ChrAsi_scaffold_629495         C 0 C 0
s Condylura_cristata.JH655880.1                          60622009 2 +  78930452 A-T
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         2033 2 -      5782 A-A
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              1433 2 -     22648 A-T
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            57330 2 -     70449 A-A
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16848923 2 +  31942871 T-A
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80040436 2 -  96802777 A-A
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18700970 1 -  18957592 a--
i Desmodus_rotundus.KZ672188.1                          C 0 I 50
s Dicerorhinus_sumatrensis.PEKH010003161.1                 326033 2 +    993696 A-A
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   6674 2 +    151128 A-A
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1496014 2 +   1727528 A-A
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Enhydra_lutris.KZ291749.1                              85877288 2 +  99434291 A-A
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4708735 2 +   6522550 a-c
i Eptesicus_fuscus.JH977687.1                           C 0 I 50
s Equus_asinus.JREZ01000062.1                             5856399 2 -   7175178 A-A
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13354899 2 +  41866177 A-A
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          16389 2 +     92910 A-A
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11540849 2 +  16010500 A-T
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48780642 2 -  48907691 A-A
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          318654 2 +    330699 A-A
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             65111 2 +     89355 A-A
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              9076 2 +     13586 T-A
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_1015201                              2339 2 -      4292 T-A
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            15472 2 +     36558 T-A
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            11797 2 +     60246 T-A
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                15280 2 +    109717 T-A
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 3265 2 -     19505 T-A
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                19937 2 +     27497 T-A
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           22393 2 +     26808 T-A
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                37128 2 +     46535 T-A
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              19867 2 -     29447 T-A
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.AANG03133801.1                                  382 2 -       736 A-A
i Felis_catus.AANG03133801.1                            C 0 I 6
s Felis_catus_fca126.CM031420.1                         129285731 2 - 158578461 A-A
i Felis_catus_fca126.CM031420.1                         C 0 I 6
s Felis_nigripes.FelNig_flattened_line_8080                 26830 2 +     52776 A-A
i Felis_nigripes.FelNig_flattened_line_8080             C 0 I 6
s Galago_moholi.ctg555                                     215130 2 -    847004 T-A
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           17491 2 -     43889 T-A
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          14634 2 +     27357 T-A
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               159375 2 +    324696 A-A
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    185812 2 -    189561 A-A
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Gorilla_beringei.k141_111300                               9065 2 -     14630 A-A
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119656165 2 - 195582420 A-A
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         5860 2 +     10286 T-A
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             4338 2 -     11661 T-A
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             9665 2 +     56096 T-A
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        32914 2 -     42470 T-A
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        49540 2 -     54384 T-A
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              22471 2 +     53719 A-A
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                32683 2 -     91191 A-A
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               62677 2 +     73687 A-A
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              150434 2 +    277961 A-A
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      282840 2 -    477199 C-A
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959                610 2 +     26078 C-A
i Hipposideros_galeritus.HipGal_scaffold_52959          C 0 C 0
s Hoolock_leuconedys.ctg315                                   350063 2 +    431944 A-A
i Hoolock_leuconedys.ctg315                                C 0 C 0
s Hylobates_abbotti.k141_1816750                             1544 2 +      3202 A-A
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1633646                              1514 2 -      2102 A-A
i Hylobates_agilis.k141_1633646                         C 0 C 0
s Hylobates_klossii.k141_468230                              3031 2 +      5464 A-A
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14628379 2 -  25970782 A-A
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                             930 2 +      4161 A-A
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             36487 2 -     60944 A-A
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Indri_indri.k141_2197838                                   1337 2 +      3484 T-A
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              12648 2 +     17520 A-A
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Lagothrix_lagothricha.k141_12968                          53827 2 -    147782 A-A
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    5352 2 +     26176 a-C
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 I 45
s Lemur_catta.scaffold_1                                258411212 2 - 285822530 T-A
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        28515 2 +     39228 C-A
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            57879 2 +     63517 C-A
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        36259 2 -     38897 C-A
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      2305 2 -     13103 C-A
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3091251 2 -   3498232 A-A
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    20670 2 +     22452 A-A
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            139582 2 +   3060487 A-A
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19252262 2 +  19376315 A-A
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           15078 2 +     84689 T-A
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3782817 2 +   6799190 T-A
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20598602 2 -  62548349 A-A
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11095019 3 +  39895028 ATA
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             24013 2 +     74745 A-A
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12710474 2 +  12821369 A-A
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                3048 2 -     26467 A-A
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           50919 2 +     63263 A-A
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 3029 2 -     26361 A-A
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 6219 2 -      7381 A-A
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  49448 2 -     79256 A-A
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196039546 2 + 196197964 A-A
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11449716 2 +  11645122 A-A
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   8402 2 -     46448 A-A
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                6064 2 -     13212 A-A
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 19745 2 -     55006 A-A
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43844860 2 +  43892939 A-A
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               21028 2 -     24607 A-A
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               8399 2 -     27140 A-A
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43441435 2 -  43563597 A-A
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4454239 2 -   4543643 A-A
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            152016 2 +    252755 T-A
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             39605 2 +     58827 T-A
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       65405 2 -    234502 A-A
i Megaderma_lyra.MegLyr_scaffold_3562                   I 150 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             6171 2 -     87323 A-A
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    2237 2 -     12939 A-A
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16514275 2 +  47401472 T-A
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  41288 2 -     48017 A-A
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               24723 2 -     32043 a-G
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 I 46
s Miniopterus_natalensis.LDJU01000022.1                   8212788 2 +  10048721 a-a
i Miniopterus_natalensis.LDJU01000022.1                 C 0 I 45
s Miniopterus_schreibersii.MinSch_scaffold_24116            37278 2 +     45743 a-g
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 I 45
s Miopithecus_ogouensis.k141_2935907                         5981 2 +     29742 A-A
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        16747 2 -    104932 A-A
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     4955 2 -     12809 T-A
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 150029 2 +    154973 A-A
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                163258 2 +    265003 a-G
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 I 50
s Moschus_moschiferus.MosMos_scaffold_78805                  6032 2 -     19904 A-A
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  150148 2 -    168139 A-A
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          24199 2 -    100666 a-C
i Murina_feae.MurFea_scaffold_2254                      C 0 I 50
s Mustela_putorius.JH417978.1                             4428016 2 -  28371801 A-A
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myotis_brandtii.KE161952.1                               971069 2 +   8389877 a-c
i Myotis_brandtii.KE161952.1                            C 0 I 50
s Myotis_davidii.KB114863.1                               5022490 2 +   6462685 a-c
i Myotis_davidii.KB114863.1                             C 0 I 50
s Myotis_lucifugus.GL429887.1                             3468573 2 -   3747815 a-c
i Myotis_lucifugus.GL429887.1                           C 0 I 50
s Myotis_myotis.MyoMyo_scaffold_6123                        13814 2 +     66751 a-C
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 I 50
s Neomonachus_schauinslandi.NINY01007774.1                4490145 2 -  14209539 A-A
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3954620 2 -   4490290 A-A
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  50353 2 +     94413 a-g
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 I 43
s Nomascus_annamensis.k141_762468                              49 2 -      2755 A-A
i Nomascus_annamensis.k141_762468                       C 0 C 0
s Nomascus_concolor.k141_70405                                670 2 +      1153 A-A
i Nomascus_concolor.k141_70405                          C 0 C 0
s Nomascus_gabriellae.k141_1400361                            600 2 -      2203 A-A
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_1022                             624 2 -     11638 A-A
i Nomascus_siki_b.tarseq_1022                       C 0 C 0
s Nomascus_siki_a.k141_421408                                   514 2 +     16235 A-A
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                37884 3 +   3668941 ATA
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65571641 2 -  95554990 T-A
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_771591                            15050 2 +     16181 T-A
i Nycticebus_coucang.k141_771591                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65679837 2 +  89412551 T-A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Odobenus_rosmarus.KB229369.1                             684848 2 -   3126709 A-A
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1083464 2 +   1425656 A-A
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         41547 2 +     78940 A-A
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Orcinus_orca.KB316965.1                                 7228296 2 -   7562323 A-A
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              64075 2 -     66828 A-A
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141883686 2 + 163896628 A-A
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      315022 3 -    505867 ATA
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        4990 2 -     53940 T-A
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18012963 2 -  38779656 T-A
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134082469 2 - 275406953 A-A
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      83704 2 +    140051 A-A
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127578344 2 - 205426864 A-A
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120155504 2 - 196562556 A-A
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  39750 2 +    295523 A-A
i Panthera_onca.PanOnc_flattened_line_1615              C 0 I 6
s Panthera_pardus.KV860323.1                              3643565 2 +  18214204 A-A
i Panthera_pardus.KV860323.1                            C 0 I 6
s Panthera_tigris.KE721879.1                              5033213 2 -   6340057 A-A
i Panthera_tigris.KE721879.1                            C 0 I 6
s Pantholops_hodgsonii.KE114631.1                         1071345 2 -   1292953 A-A
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188160224 2 - 188283584 A-A
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              3314 2 +     25005 A-A
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47517596 2 +  47705337 A-A
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 71587 2 -    104429 A-A
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   10119 2 +     14967 A-A
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 5984 2 -      7628 A-A
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    121248 2 -    135482 A-A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          10663 2 -     23713 T-A
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           11803 2 +     61070 T-A
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              2761 2 +      8220 A-A
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            99361 2 +    112873 A-C
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        I 3 I 48
s Platanista_gangetica.PlaMin_flattened_line_72990           9232 2 +     21690 A-A
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       25919 2 +     44506 A-A
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        26132 2 +     67491 A-A
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      16371 2 -     98129 A-A
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     25972 2 +    147771 A-A
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         2607 2 -     43940 A-A
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          6690 2 -     55515 A-A
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         26044 2 +    152463 A-A
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       3852 2 -    119457 A-A
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         15767 2 +    134592 A-A
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          26354 2 -     75465 A-A
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              190967 2 -    373494 A-A
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19811614 2 +  19899266 A-A
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                3783 2 -      9567 A-A
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6852586 2 +  12164890 T-A
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     21615 2 -     30946 t-a
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         7670 2 +     11805 T-A
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           47005 2 +     52369 T-A
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         39392 2 -     44753 T-A
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            21315 2 +     27322 T-A
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       20963 2 -     53241 T-A
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         43226 2 -     48185 T-A
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Pteronotus_parnellii.KE867983.1                            5902 2 -     27784 a-t
i Pteronotus_parnellii.KE867983.1                       C 0 I 49
s Pteronura_brasiliensis.PteBra_flattened_line_1343        250139 2 -    344369 A-A
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Puma_concolor.QAVW01000427.1                          131539861 2 - 161321710 A-A
i Puma_concolor.QAVW01000427.1                          C 0 I 6
s Rangifer_tarandus.RanTarSib_scaffold_24239                20328 2 +     68503 A-A
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1792440 2 +   2252614 C-A
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                       738 2 -      4338 A-A
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15676376 2 -  43202129 A-A
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        8289 2 +     34089 A-A
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              8229 2 -     60842 A-A
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              8323 2 +     67014 A-A
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              8300 2 +     60816 A-A
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 8237 2 -     76454 A-A
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17345024 2 -  30362882 A-A
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         24345 2 -     62485 A-A
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   39469 2 -    114521 A-T
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            23393 2 +    739146 A-A
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17769850 2 -  27805282 G-T
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             238657 2 -    276980 A-A
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            33064 2 +     62062 A-A
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189274837 2 + 218635234 A-A
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        18637 2 -  13920577 A-A
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                2133 2 +     20549 a-G
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 I 51
s Tapirus_indicus.TapInd_scaffold_176                      810623 2 +   1148477 A-A
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  61265 2 +     99546 A-A
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               31210 2 +     42269 A-A
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               64519 2 +     65473 A-A
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194011757 2 - 194193292 A-A
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  137899 2 -    259118 a-G
i Tonatia_saurophila.TonSau_scaffold_3334               I 2 I 50
s Tragulus_javanicus.TraJav_scaffold_14717                   9365 2 +     90398 A-A
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16089676 2 +  31416278 A-A
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2797590 2 -   3938065 A-G
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    9519 2 +     13056 A-G
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69317025 2 -  96451834 A-A
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   9992 2 +     10241 A-C
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 C 0
s Ursus_maritimus.KK498671.1                              6520322 2 +  28682327 A-A
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  9228 2 -     20643 T-A
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             28763 2 -     33872 T-A
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1528059 2 -   2331223 A-A
i Vicugna_pacos.KN269600.1                              I 1 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                144249 3 -    281493 ATA
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        219704 2 -    227762 A-A
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            1769 2 -     13665 A-A
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Petromus_typicus.PetTyp_scaffold_33007                    17127 0 -     36578 C
e Dinomys_branickii.DinBra_scaffold_1996                   158442 1030 +    228994 I
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           4051 456 -      6963 I
e Aplodontia_rufa.AprRuf_scaffold_101456                     2195 14 +     11424 I
e Ochotona_princeps.JH802095.1                            4999348 675 -  23139505 I
e Perognathus_longimembris.PerPac_flattened_line_19359       2074 16 +     49596 I
e Dipodomys_stephensi.DipSte_scaffold_84338                  2331 15 -     11986 I
e Dipodomys_ordii.KN672545.1                              3659983 15 +   4240102 I
e Tamandua_tetradactyla.TamTet_scaffold_26877               16259 379 +     45698 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             6589 379 -      8794 I
e Kogia_breviceps.KogBre_flattened_line_35920               27132 184 +     37189 I
e Hyaena_hyaena.HyaHya_flattened_line_20729                 22998 0 -     67322 C
e Elephantulus_edwardii.JH947210.1                        7830035 1277 +  15467074 I
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Echinops_telfairi.JH980316.1                           22999931 2 -  44670279 I
e Dasypus_novemcinctus.JH568778.1                          185121 383 -   6883506 I
e Choloepus_hoffmanni.KN194586.1                           763329 503 +    964067 I
e Choloepus_didactylus.ChoDid_scaffold_36182                18024 504 -     21363 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           21043 0 -    119109 C
e Glis_glis.GliGli_scaffold_79770                           16259 14 -     18683 I
e Zapus_hudsonius.ZapHud_scaffold_256618                      324 0 -      2259 C
e Jaculus_jaculus.JH725517.1                              8577240 0 +  11848649 C
e Allactaga_bullata.AllBul_scaffold_70162                   21547 0 -     22067 C
e Microtus_ochrogaster.CM001673.1                        22824432 0 -  98408828 C
e Xerus_inauris.XerIna_scaffold_7898                       131378 14 -    134049 I
e Trachypithecus_pileatus.k141_1022309                       5226 0 +     13828 C
e Trachypithecus_phayrei.ctg3                            44662914 0 -  44834318 C
e Trachypithecus_obscurus.k141_1115109                       8130 0 -     28054 C
e Trachypithecus_melamera.k141_699241                        2986 0 -     24393 C
e Trachypithecus_leucocephalus.k141_381681                   3005 0 +     12481 C
e Trachypithecus_laotum.k141_760702                          4719 0 +     14371 C
e Trachypithecus_hatinhensis.k141_504423                     6067 0 -     15592 C
e Trachypithecus_germaini.k141_868450                        3883 0 -     11566 C
e Trachypithecus_geei.k141_670367                           46082 0 -     54611 C
e Trachypithecus_francoisi.k141_768164                       4689 0 -     14244 C
e Trachypithecus_cristatus.k141_1011511                      5261 0 -     12939 C
e Trachypithecus_crepusculus.k141_1588528                   23360 0 -     32910 C
e Trachypithecus_auratus.k141_738098                        29800 0 +     38948 C
e Spermophilus_dauricus.KZ294190.1                        2243876 14 +   2842873 I
e Sigmodon_hispidus.SigHis_scaffold_11332                  104848 0 -    120886 C
e Semnopithecus_vetulus.k141_1143185                        16479 0 +     30600 C
e Semnopithecus_schistaceus.k141_387461                     33457 0 +     42640 C
e Semnopithecus_priam.k141_410937                           40312 0 +     46263 C
e Semnopithecus_johnii.k141_785014                         121532 0 +    130994 C
e Semnopithecus_hypoleucos.k141_761524                      11528 0 +     20762 C
e Semnopithecus_entellus.k141_1572367                        6153 0 +     15331 C
e Rhinopithecus_strykeri.ctg4                            44859307 0 -  45163003 C
e Rhinopithecus_bieti.k119_554384                            2917 0 -     17045 C
e Rattus_norvegicus.chr11                                13917487 0 +  90463843 C
e Pygathrix_nigripes_a.k141_101123                             8537 0 +     18040 C
e Pygathrix_nigripes_b.ctg79                                 6809148 0 +   6970761 C
e Pygathrix_cinerea.k141_374971                             32651 0 +     56732 C
e Psammomys_obesus.NESX01026517.1                           38073 0 +     77221 C
e Presbytis_mitrata.k141_860013                              8661 0 +     14865 C
e Presbytis_comata.k141_672698                               8546 0 -     15069 C
e Pithecia_vanzolinii.k141_831006                           15424 0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514 0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521 0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292 0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093 0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038 0 +     78826 C
e Pithecia_albicans.k141_991845                             45662 0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000036.1               26743271 0 +  26888534 C
e Piliocolobus_kirkii.k141_929665                            4788 0 +      7694 C
e Piliocolobus_gordonorum.k141_1270531                       5421 0 -     17985 C
e Piliocolobus_badius.k141_1987485                           4802 0 -      5908 C
e Peromyscus_maniculatus.KI615518.1                       4955283 0 -   8017169 C
e Onychomys_torridus.OnyTor_scaffold_12578                  42920 0 +     62360 C
e Ondatra_zibethicus.OndZib_scaffold_6821                  130228 0 +    145789 C
e Octodon_degus.JH651621.1                                3687420 1881 +  10294119 I
e Nasalis_larvatus.k141_153429                              11264 0 +     48152 C
e Nannospalax_galili.KL201303.1                            120184 0 +    362372 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     91920 1922 -    117718 I
e Muscardinus_avellanarius.MusAve_scaffold_9643             14670 10 +     98495 I
e Mus_spretus.CM004110.1                                 74336437 0 +  97876770 C
e Mus_pahari.LT608305.1                                  67560086 0 +  89017189 C
e Mus_musculus.chr16                                     75493711 0 +  98207768 C
e Mus_caroli.LT608236.1                                  70771657 0 +  92629107 C
e Mesocricetus_auratus.KB708139.1                         1051349 0 -  26018355 C
e Meriones_unguiculatus.MerUng_scaffold_9483                 1078 0 +    115071 C
e Marmota_marmota.CZRN01000005.1                         36878040 14 +  64221397 I
e Ictidomys_tridecemlineatus.JH393315.1                   7130171 14 +  13083262 I
e Hystrix_cristata.HysCri_scaffold_50788                     7688 1865 +     22540 I
e Heterocephalus_glaber.JH602058.1                        2560454 0 +  31725842 C
e Graphiurus_murinus.GraMur_scaffold_4493                   79590 10 +    118900 I
e Fukomys_damarensis.KN123630.1                          13895937 0 -  19261668 C
e Ellobius_talpinus.LOJH01198462.1                           1370 0 -      1901 C
e Ellobius_lutescens.LOEQ01003611.1                        243628 0 -    369425 C
e Dolichotis_patagonum.DolPat_scaffold_14102                39755 0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             61788 0 -    236241 C
e Cuniculus_paca.CunPac_flattened_line_16637                20648 0 +     26546 C
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 32592 1717 -     67205 I
e Ctenodactylus_gundi.CteGun_scaffold_447                  214200 0 -    956709 C
e Cricetulus_griseus.LT883672.1                          53034830 0 +  72327488 C
e Cricetomys_gambianus.CriGam_scaffold_949                 282462 0 -    399297 C
e Colobus_polykomos.k141_1406057                            19335 0 +     23629 C
e Colobus_guereza.LG08                                  147667351 0 + 156195979 C
e Colobus_angolensis.KN985967.1                          10889423 0 +  10971483 C
e Chinchilla_lanigera.JH721867.1                         15963245 964 +  43084221 I
e Cavia_tschudii.CavTsc_scaffold_488                       179587 0 +    436027 C
e Cavia_porcellus.DS562889.1                             15801415 0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15789476 0 -  24422027 C
e Acomys_cahirinus.AcoCah_scaffold_1625                    117590 0 -    189883 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               17363 19 +    209709 TCTGT----------------C--C-TTCTT-A-TT-CCC-A
s Acinonyx_jubatus.LLWD01000356.1                         2039344 10 +   3721120 ----------------------------TTT-A-TT-CTC-A
i Acinonyx_jubatus.LLWD01000356.1                       I 6 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    117590 15 -    189883 ----C----------------C--C-CTTTG-A-TT-CCT-G
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 I 17
s Ailuropoda_melanoleuca.LNAT01000321.1                  10663030 10 +  23371972 ----------------------------TTT-A-TT-CCC-A
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7099818 19 -  16596857 TCTGC----------------C--C-TTTTT-A-TT-CCC-A
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   21547 16 -     22067 ----C---------------TT--CCTTTAG-A-TT-CTC--
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   5235 19 -     60446 TCTGC----------------C--C-TTTTT-A-TT-CCC-A
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         5952 19 -     29318 TCTGC----------------C--C-TTTTT-A-TT-CCC-A
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         4890 19 +     38766 TCTGC----------------C--C-TTTTT-A-TT-CCC-A
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          5846 19 -     80423 TCTGC----------------C--C-TTTTT-A-TT-CCC-A
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                               818 19 +     19852 TCTGT----------------C--C-TTTTT-A-TT-ATC-A
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                3074 19 -     12443 TCTGT----------------C--C-TTTTT-A-TT-ACC-A
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                              373 19 +      5070 TCTGT----------------C--C-TTTTT-A-TT-ATC-A
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                  118 19 -      1641 TCTGT----------------C--C-TTTTT-A-TT-ACC-A
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          2857 19 -     24210 TCTGT----------------C--C-TTTTT-A-TT-ACC-A
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           29439 19 -     30219 TCTGT----------------C--C-TTTTT-A-TT-ACC-A
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_405616                              5275 19 +     16794 TCTGT----------------C--C-TTTTT-A-TT-ACC-A
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                             407 19 -      1470 TCTGT----------------C--C-TTTTT-A-TT-ACC-A
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             4552 19 -      9835 TCTGT----------------C--C-TTTTT-A-TT-ACC-A
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3525338 19 +   4113121 TTTGC----------------C--C-TTTTA-A-TT-CCC-A
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      392391  4 -    631301 TTTG--------------------------------------
i Anoura_caudifer.AnoCau_scaffold_422                   I 50 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             2769 19 +     55446 TTTGC----------------C--C-TTTTA-A-TT-CCC-A
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 66165 19 +     78111 TCTGT----------------C--C-TTTTT-A-TT-ACC-A
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            9111 19 +     22701 TCTGT----------------C--C-TTTTT-A-TT-ACC-A
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5753069 19 +   9889416 TCTGT----------------C--C-TTTTT-A-TT-ACC-A
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             9667 19 -    104377 TCTGT----------------C--C-TTTTT-A-TT-CCC-A
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               9674 19 +     23246 TCTGT----------------C--C-TTTTT-A-TT-CCC-A
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     2209 15 +     11424 ----A----------------A--C-TTTTT-A-TT-CCC-A
i Aplodontia_rufa.AprRuf_scaffold_101456                I 14 C 0
s Arctocebus_calabarensis.k141_587554                        6291 19 +      9265 TCTGC----------------C--C-TTTTT-A-TT-CCC-A
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                10815  4 -     29036 TTTG--------------------------------------
i Artibeus_jamaicensis.ArtJam_scaffold_41619            I 50 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9542960 19 +  39197703 TCTGT----------------C--C-TTTTT-A-TT-ACC-A
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             64233 19 +     85812 TCTGT----------------C--C-TTTTT-A-TT-ACC-A
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                15246 19 +     89302 TCTGT----------------C--C-TTTTT-A-TT-ACC-A
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             19747 19 -     58268 TCTGT----------------C--C-TTTTT-A-TT-ACC-A
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             67741 19 +    119057 TCTGT----------------C--C-TTTTT-A-TT-ACC-A
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               9710 19 -     25888 TCTGT----------------C--C-TTTTT-A-TT-ATC-A
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                10766 19 -     16375 TCTGC----------------C--C-TTTTT-A-TTCCC--A
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               4382 19 +      6337 TCTGC----------------C--C-TTTTT-A-TTCCC--A
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26383813 19 +  51448160 TCTGT----------------C--A-TTTTA-A-TT-CCC-A
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        8986 19 -     13118 TCTGT----------------C--A-TTTTA-A-TT-CCC-A
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   47800 19 -     72089 TTTGC----------------C--C-TTTTA-A-TT-CCC-A
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   301944 19 -   6870073 TTTGC----------------C--C-TTTTA-A-AT-CGC-A
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22956042 19 + 161108492 TTTGC----------------C--C-TTTTA-A-TT-NGC-A
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     418307 19 +    998990 TTTGC----------------C--C-TTTTA-A-AT-CGC-A
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22664696 19 + 158972876 TTTGC----------------C--C-TTTTA-A-TT-CGC-A
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               674459 19 +   1914593 TTTGC----------------C--C-TTTTA-A-TT-CCC-G
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               117612 19 -    171031 TCTGT----------------C--C-TTTTT-A-TT-ACC-A
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 16632 19 +    125063 TCTGT----------------C--C-TTTTT-A-TT-ACC-A
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                18679 19 -    216513 TCTGT----------------C--C-TTTTT-A-TT-ACC-A
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       11222 19 -    134917 TCTGT----------------C--C-TTTTT-A-TT-ACC-A
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3222951 19 -   8989139 TCTGC----------------C--C-TTTTA-A-TT-CCC-A
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           400653 19 -  15254737 TCTGC----------------C--C-TTTTA-A-TT-CCC-A
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2976389 19 +   6889770 TCTGC----------------C--C-TTTTA-A-TT-CCC-A
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11526172 19 +  39901454 TCTGC----------------C--C-TTTTA-A-TT-TCC-A
i CanFam4.chr31                                         C 0 I 13
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   21146 19 +     87036 TCTGC----------------C--C-TTTTA-A-TT-TCC-A
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 I 13
s Canis_lupus_dingo.QKWQ01001993.1                       11272855 19 -  35597290 TCTGC----------------C--C-TTTTA-A-TT-TCC-A
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 I 13
s Canis_lupus_familiaris.chr31                           11095566 19 +  39895921 TCTGC----------------C--C-TTTTA-A-TT-TCC-A
i Canis_lupus_familiaris.chr31                          C 0 I 13
s Canis_lupus_orion.HG994411.1                           16462351 19 -  44759192 TCTGC----------------C--C-TTTTA-A-TT-TCC-A
i Canis_lupus_orion.HG994411.1                          C 0 I 13
s Capra_aegagrus.CM003214.1                              21330418 19 + 157394656 TTTGC----------------C--C-TTTTA-A-TT-CCC-A
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135711635 19 - 157403528 TTTGC----------------C--C-TTTTA-A-TT-CCC-A
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          313355 19 +    345090 TTTGC----------------C--C-TTTTT-A-TT-CCC-A
i Carlito_syrichta.NW_007248099.1                       C 0 I 3
s Carollia_perspicillata.CarPer_scaffold_4436               61601  4 +     67245 TTTG--------------------------------------
i Carollia_perspicillata.CarPer_scaffold_4436           I 50 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   162481 19 -    276539 TCTGC----------------C--C-TTTTG-A-TT-TCC-A
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15789476 32 -  24422027 ----TGACAGaaaactgttttc--tgttttt-a-ca-caT-G
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15801415 32 -  24440124 ----TGACAGaaaactgttttc--tgttttt-a-ca-caT-G
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       179587 32 +    436027 ----TGACAGAAAACTGTTTTC--TGTTTTT-A-CA-CAT-G
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18894445 19 -  29618158 TCTGT----------------C--C-TTTTT-A-TT-ACC-A
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                11989 19 -     26817 TCTGT----------------C--C-TTTTT-A-TT-ACC-A
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                16233 19 +     25043 TCTGT----------------C--C-TTTTT-A-TT-ACC-A
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                        12370 19 +     21754 TTTAT----------------T--T-TTTTT-A-TT-CCC-A
i Cephalopachus_bancanus.k141_702587                    C 0 I 3
s Ceratotherium_simum.JH767818.1                          4367388 19 +   7569818 CCTAC----------------C--C-TTTTT-A-TT-CCC-A
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         7145 19 -      9338 CCTAC----------------C--C-TTTTT-A-TT-CCC-A
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6559176 19 +   6739814 TCTGC----------------C--C-TTTTT-A-TT-CCC-A
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      30653 19 +     60454 TCTGC----------------C--C-TTTTT-A-TT-CCC-A
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          5857 19 -     21101 TCTGC----------------C--C-TTTTT-A-TT-CCC-A
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         63167 19 -    107033 TCTGC----------------C--C-TTTTT-A-TT-CCC-A
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        6030 19 -     17608 TCTGC----------------C--C-TTTTT-A-TT-CCC-A
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          3195 19 +     45019 TCTGC----------------C--C-TTTTT-A-TT-CCC-A
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           3255 19 +     15177 TCTGC----------------C--C-TTTTT-A-TT-CCC-A
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          6077 19 +     16677 TCTGC----------------C--C-TTTTT-A-TT-CCC-A
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           28267 19 +     35983 TCTGC----------------C--C-TTTTT-A-TT-CCC-A
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11994798 19 +  12117833 TCTGC----------------C--C-TTTTT-A-TT-CCC-A
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46481559 19 +  46592721 TCTGC----------------C--C-TTTTT-A-TT-CCC-A
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      45108 19 -     45581 TCTGC----------------C--C-TTTTT-A-TT-CCC-A
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       6091 19 +     35577 TCTGC----------------C--C-TTTTT-A-TT-CCC-A
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        5885 19 -     25661 TCTGC----------------C--C-TTTTT-A-TT-CCC-A
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        5842 19 -     17744 TCTGC----------------C--C-TTTTT-A-TT-CCC-A
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        25426 19 +     37128 TCTGC----------------C--C-TTTTT-A-TT-CCC-A
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           62990 19 -     68416 TCTGC----------------C--C-TTTTT-A-TT-CC-CA
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                           12096 19 +     13308 TCTGC----------------C--C-TTTTT-A-TT-CC-CA
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             9272 19 -     18223 TCTGT----------------C--C-TTTTT-A-TT-ACC-A
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              1011 19 +    188999 TCTGT----------------C--C-TTTTT-A-TT-ACC-A
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           45309 19 +     57117 TCTGT----------------C--C-TTTTT-A-TT-ACC-A
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          49989 19 +     54541 TCTGT----------------C--C-TTTTT-A-TT-ACC-A
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chiropotes_israelita.k141_1189915                         74791 19 +    196370 TCTGT----------------C--C-TTTTT-A-TT-ACC-A
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          18972 19 +     40510 TCTGT----------------C--C-TTTTT-A-TT-ACC-A
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15143611 19 -  15256731 TCTGC----------------C--C-TTTTT-A-TT-CCC-A
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      38075 19 -     53260 TCTGC----------------C--C-TTTTT-A-TT-CCC-A
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101148634 19 + 101219884 TCTGC----------------C--C-TTTTT-A-TT-CCC-A
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_629495              2044 18 -      3120 -CTGC----------------C--C-TTTTT-A-TT-CCT-A
i Chrysochloris_asiatica.ChrAsi_scaffold_629495         C 0 C 0
s Condylura_cristata.JH655880.1                          60622011 19 +  78930452 GCTGC----------------C--T-TTTCT-A-CT-TCT-G
i Condylura_cristata.JH655880.1                         C 0 I 1
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         2035 19 -      5782 TCTGC----------------T--C-TTTTT-A-TT-TCT-T
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 282462 15 -    399297 ----C----------------C--C-TTTTT-A-TT-CCC-T
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53034830 15 +  72327488 ----C----------------A--C-CTTTT-A-TT-CCA-A
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              1435 18 -     22648 TTTG-----------------C--A-TATAT-A-TT-CAC-C
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 I 19
s Cryptoprocta_ferox.CryFer_flattened_line_19014            57332 19 -     70449 TATGT----------------C--T-TTTTT-A-TT-CTC-A
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  214200  6 -    956709 ----C----------------T--A-TTC-------------
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 I 2
s Cuniculus_paca.CunPac_flattened_line_16637                20648 32 +     26546 ----TGATGGAAGACTATCTTC--TGTTTTT-A-TT-ACC-A
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             61788 32 -    236241 ----TGACAGAAAATTATCTTT--CATTCTT-A-TT-CTC-A
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16848925 19 +  31942871 TCTGC----------------C--C-TTTTT-A-TT-CCC-A
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80040438 19 -  96802777 TCTGC----------------C--A-TTTTA-A-TT-CCC-A
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18701021  4 -  18957592 TTTG--------------------------------------
i Desmodus_rotundus.KZ672188.1                          I 50 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 326035 19 +    993696 CCTAC----------------C--C-TTTCT-A-TT-CCC-A
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   6676 19 +    151128 CCTAC----------------C--C-TTTTT-A-TT-CCC-A
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dipodomys_ordii.KN672545.1                              3659998 15 +   4240102 ----C----------------C--C-CTTTG-A-TT-CCC-A
i Dipodomys_ordii.KN672545.1                            I 15 I 1
s Dipodomys_stephensi.DipSte_scaffold_84338                  2346 15 -     11986 ----C----------------C--C-CTTTG-A-TT-CCC-A
i Dipodomys_stephensi.DipSte_scaffold_84338             I 15 I 1
s Dolichotis_patagonum.DolPat_scaffold_14102                39755 32 -     73477 ----TGACAGAAAACTATCTTC--TGCTTTT-A-CT-CCT-A
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 I 4
s Elaphurus_davidianus.JRFZ01086400.1                     1496016 19 +   1727528 TTTGT----------------C--C-TTTTA-A-CT-CCC-A
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        243628 14 -    369425 ----T----------------A--C-CC-TT-A-TT-CTC-C
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01198462.1                           1370 14 -      1901 ----T----------------A--C-CC-TT-A-TT-CTC-C
i Ellobius_talpinus.LOJH01198462.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85877290 19 +  99434291 TCTGC----------------C--C-TTTTT-A-TT-CCC-A
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4708787  4 +   6522550 TCTG--------------------------------------
i Eptesicus_fuscus.JH977687.1                           I 50 C 0
s Equus_asinus.JREZ01000062.1                             5856401 19 -   7175178 TCTGC----------------C--C-TTTCT-A-CT-CTC-A
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13354901 19 +  41866177 TCTGC----------------C--C-TTTCT-A-CT-CTC-A
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          16391 19 +     92910 TCTGC----------------C--C-TTTCT-A-CT-CTC-A
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11540851 19 +  16010500 TGTTC----------------C--C-TTTTT-A-TT-CCC-A
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48780644 19 -  48907691 TCTGC----------------C--C-TTTTT-A-TT-CCC-A
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          318656 19 +    330699 TCTGT----------------C--A-TTTTA-A-TT-CCC-A
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             65113 19 +     89355 TCTGC----------------C--A-TTTTA-A-TT-CCC-A
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              9078 18 +     13586 TCTGC----------------C--C-TTTGT-A-TT-CC--A
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_1015201                              2341 18 -      4292 TCTGC----------------C--C-TTTGT-A-TT-CC--A
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            15474 18 +     36558 TCTGC----------------C--C-TGTGT-A-TT-CC--A
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            11799 18 +     60246 TCTGC----------------C--C-TTTGT-A-TT-CC--A
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                15282 18 +    109717 TCTAC----------------C--C-TTTGT-A-TT-CC--A
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 3267 18 -     19505 TCTGC----------------C--C-TTTGT-A-TT-CC--A
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                19939 18 +     27497 TCTGC----------------C--C-TTTGT-A-TT-CC--A
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           22395 18 +     26808 TCTGC----------------C--C-TTTGT-A-TT-CC--A
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                37130 18 +     46535 TCTGC----------------C--C-TTTGT-A-TT-CC--A
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              19869 18 -     29447 TCTAC----------------C--C-TTTGT-A-TT-CC--A
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.AANG03133801.1                                  390 10 -       736 ----------------------------TTT-A-TT-CTC-A
i Felis_catus.AANG03133801.1                            I 6 I 11
s Felis_catus_fca126.CM031420.1                         129285739 10 - 158578461 ----------------------------TTT-A-TT-CTC-A
i Felis_catus_fca126.CM031420.1                         I 6 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 26838 10 +     52776 ----------------------------TTT-A-TT-CTC-A
i Felis_nigripes.FelNig_flattened_line_8080             I 6 C 0
s Fukomys_damarensis.KN123630.1                          13895937 33 -  19261668 ----TAACAGAacactgtcttctct-ttttt-a-tt-ccc-a
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     215132 19 -    847004 TCTAC----------------C--C-TTTTT-A-TT-CCC-A
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           17493 19 -     43889 TCTAC----------------C--C-TTTTT-A-TT-CCC-A
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          14636 19 +     27357 TCTAC----------------C--C-TTTTT-A-TT-CCC-A
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               159377 12 +    324696 TCTGC----------------C--C-TTTTT-----------
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 I 6
s Giraffa_tippelskirchi.LVKQ01S012154.1                    185814 19 -    189561 TTTGC----------------C--C-TTTTA-A-TT-CCC-A
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           16273 15 -     18683 ----C----------------C--C-TTTAT-A-TT-CCC-T
i Glis_glis.GliGli_scaffold_79770                       I 14 C 0
s Gorilla_beringei.k141_111300                               9067 19 -     14630 TCTGT----------------C--C-TTTTT-A-TT-CTC-A
i Gorilla_beringei.k141_111300                          C 0 I 15
s Gorilla_gorilla.LT578340.1                            119656167 19 - 195582420 TCTGT----------------C--C-TTTTT-A-TT-CTC-A
i Gorilla_gorilla.LT578340.1                            C 0 I 15
s Graphiurus_murinus.GraMur_scaffold_4493                   79600  2 +    118900 ----C----------------C--------------------
i Graphiurus_murinus.GraMur_scaffold_4493               I 10 I 3
s Hapalemur_alaotrensis.k141_1280836                         5862 18 +     10286 TCTGC----------------C--C-TTTGT-A-TT-CC--A
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             4340 18 -     11661 TCTGC----------------C--C-TTTGT-A-TT-CC--A
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             9667 18 +     56096 TCTGC----------------C--C-TTTGT-A-TT-CC--A
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        32916 18 -     42470 TCTGC----------------C--C-TTTGT-A-TT-CC--A
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        49542 18 -     54384 TCTGC----------------C--C-TTTGT-A-TT-CC--A
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              22473 19 +     53719 TCTGT----------------C--T-TTTTT-A-TT-CTC-A
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                32685 19 -     91191 TTTGC----------------C--C-TTATA-A-TT-CCC-A
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2560454 15 +  31725842 ----c----------------t--t-ttttt-a-tt-ctc-a
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               62679 19 +     73687 TCTTC----------------C--T-TTTTT-A-TT-CCT-A
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 I 2
s Hippopotamus_amphibius.HipAmp_scaffold_1308              150436 19 +    277961 TGTGC----------------C--C-TTTTA-A-TT-TCC-A
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      282842 19 -    477199 TCTGC----------------C--C-TTTTT-A-CT-CCC-A
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959                612 19 +     26078 TCTGC----------------C--C-TTTTT-A-CT-CCC-A
i Hipposideros_galeritus.HipGal_scaffold_52959          C 0 C 0
s Hoolock_leuconedys.ctg315                                   350065 19 +    431944 TCTGC----------------C--C-TTTTT-A-TT-CCC-A
i Hoolock_leuconedys.ctg315                                C 0 I 59
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           21043 32 -    119109 ----TGACAGAAAACTATCTTT--TGTTTTT-A-CT-CCT-A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 I 4
s Hylobates_abbotti.k141_1816750                             1546 19 +      3202 TCTGC----------------C--C-TTTTT-A-TT-CCC-A
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1633646                              1516 19 -      2102 TCTGC----------------C--C-TTTTT-A-TT-CCC-A
i Hylobates_agilis.k141_1633646                         C 0 C 0
s Hylobates_klossii.k141_468230                              3033 19 +      5464 TCTGC----------------C--C-TTTTT-A-TT-CCC-A
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14628381 19 -  25970782 TCTGC----------------C--C-TTTTT-A-TT-CCC-A
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                             932 19 +      4161 TCTGC----------------C--C-TTTTT-A-TT-CCC-A
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             36489 19 -     60944 TCTGC----------------C--C-TTTTT-A-TT-CCC-A
i Hylobates_pileatus_a.tarseq_592                         C 0 I 6
s Ictidomys_tridecemlineatus.JH393315.1                   7130185 15 +  13083262 ----A----------------A--C-GTTTT-A-GC-CCC-A
i Ictidomys_tridecemlineatus.JH393315.1                 I 14 C 0
s Indri_indri.k141_2197838                                   1339 19 +      3484 TCTGC----------------C--C-TTTTT-A-TT-CC-CA
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              12650 19 +     17520 TCTGC----------------C--A-TTTTA-A-TT-CCC-A
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8577240 16 +  11848649 ----C---------------TT--CCATTAG-A-TT-CTC--
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Lagothrix_lagothricha.k141_12968                          53829 19 -    147782 TCTGT----------------C--C-TTTTT-A-TT-ACC-G
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    5399  4 +     26176 TCTG--------------------------------------
i Lasiurus_borealis.LasBor_scaffold_59542               I 45 C 0
s Lemur_catta.scaffold_1                                258411214 18 - 285822530 TCTGC----------------C--C-TTTGT-A-TT-CC--A
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        28517 19 +     39228 TCTGC----------------C--C-TTTTT-A-TT-CC-CA
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            57881 19 +     63517 TCTGC----------------C--C-TTTTT-A-TT-CC-CA
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        36261 19 -     38897 TCTGC----------------C--C-TTTTT-A-TT-CC-CG
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      2307 19 -     13103 TCTGC----------------C--C-TTTTT-A-TT-CC-CA
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3091253 19 -   3498232 TCTGT----------------A--C-TTTTT-A-TT-CCC-A
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    20672 19 +     22452 TCTGC----------------C--C-TTTTA-A-TT-CCT-T
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            139584 19 +   3060487 TCTGC----------------C--A-TTTTA-A-TT-CCC-A
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19252264 19 +  19376315 TCTGC----------------C--C-TTTTT-A-TT-CCC-A
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           15080 19 +     84689 TTGAC----------------C--C-TTTTT-A-TT-CCC-A
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3782819 19 +   6799190 TTGAC----------------C--C-TTTTT-A-TT-CCC-A
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20598604 19 -  62548349 TCTGC----------------C--C-TTTAT-A-TT-CCC-A
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11095022 19 +  39895028 TCTGC----------------C--C-TTTTA-A-TT-TCC-A
i Lycaon_pictus.CM007556.1                              C 0 I 13
s Macaca_arctoides.k141_2201161                             24015 20 +     74745 TCTGC----------------C--C-TTTTT-TTTT-CCC-A
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12710476 20 +  12821369 TCTGC----------------C--C-TTTTT-TTTT-CCC-A
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                3050 19 -     26467 TCTGC----------------C--C-TTTTT-A-TT-CCC-A
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           50921 19 +     63263 TCTGC----------------C--C-TTTTT-A-TT-CCC-A
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 3031 19 -     26361 TCTGC----------------C--C-TTTTT-A-TT-CCC-A
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 6221 19 -      7381 TCTGC----------------C--C-TTTTT-A-TT-CCC-A
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  49450 19 -     79256 TCTGC----------------C--C-TTTTT-A-TT-CCC-A
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196039548 19 + 196197964 TCTGC----------------C--C-TTTTT-A-TT-CCC-A
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11449718 19 +  11645122 TCTGC----------------C--C-TTTTT-A-TT-CCC-A
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   8404 19 -     46448 TCTGC----------------C--C-TTTTT-A-TT-CCC-A
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                6066 20 -     13212 TCTGC----------------C--C-TTTTT-TTTT-CCC-A
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 19747 19 -     55006 TCTGC----------------C--C-TTTTT-A-TT-CCC-A
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43844862 19 +  43892939 TCTGC----------------C--C-TTTTT-A-TT-CCC-A
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               21030 20 -     24607 TCTGC----------------C--C-TTTTT-TTTT-CCC-A
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               8401 19 -     27140 TCTGC----------------C--C-TTTTT-A-TT-CCC-A
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43441437 19 -  43563597 TCTGC----------------C--C-TTTTT-A-TT-CCC-A
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4454241 19 -   4543643 TCTGC----------------C--C-TTTTT-A-TT-CCC-A
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            152018 19 +    252755 TCTGC----------------C--C-ATTTG-G-TT-CTC-A
i Manis_javanica.JSZB01003966.1                         C 0 I 1
s Manis_pentadactyla.KN017078.1                             39607 19 +     58827 TCTGC----------------C--C-ATTTG-G-TT-CTC-A
i Manis_pentadactyla.KN017078.1                         C 0 I 1
s Marmota_marmota.CZRN01000005.1                         36878054 15 +  64221397 ----A----------------A--C-GTTTT-A-GC-CCC-A
i Marmota_marmota.CZRN01000005.1                        I 14 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       65407 19 -    234502 CCTAC----------------C--C-TTTCT-A-TT-CTC-A
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             6173 18 -     87323 TCTGC----------------C--C-TT-TT-A-TT-CCC-A
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 1078 15 +    115071 ----C----------------C--C-TTTTG-A-TT-TCT-G
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1051349 15 -  26018355 ----C----------------C--C-CTTTT-A-TT-TCT-A
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    2239 19 -     12939 TCTGC----------------C--A-TTTTA-A-TT-CCC-A
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16514277 19 +  47401472 TCTGC----------------C--C-TTTTT-A-TT-CC-CA
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  41290  5 -     48017 -----------------------------------T-CTC-A
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               24771  4 -     32043 TTTG--------------------------------------
i Micronycteris_hirsuta.MicHir_scaffold_37978           I 46 C 0
s Microtus_ochrogaster.CM001673.1                        22824432 14 -  98408828 ----T----------------A--T-CC-TT-A-TT-CTC-C
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8212835  4 +  10048721 TCTG--------------------------------------
i Miniopterus_natalensis.LDJU01000022.1                 I 45 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            37325  4 +     45743 TCTG--------------------------------------
i Miniopterus_schreibersii.MinSch_scaffold_24116        I 45 C 0
s Miopithecus_ogouensis.k141_2935907                         5983 19 +     29742 TCTGC----------------C--C-TTTTT-A-TT-CCC-A
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        16749 19 -    104932 TCTGT----------------A--C-TTTTT-A-TT-CCC-A
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     4957 19 -     12809 TCTCC----------------C--C-TTTTT-A-TT-TC-CA
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 150031 19 +    154973 TCTGC----------------C--A-TTTTA-A-TT-CCC-A
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                163310  4 +    265003 TCTG--------------------------------------
i Mormoops_blainvillei.MorMeg_scaffold_2952             I 50 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  6034 19 -     19904 TTTGC----------------C--C-TTTTA-A-TT-CCC-A
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  150150 18 -    168139 TCTGT----------------C--T-T-TTT-A-TT-CTC-A
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          24251  4 -    100666 TCTG--------------------------------------
i Murina_feae.MurFea_scaffold_2254                      I 50 C 0
s Mus_caroli.LT608236.1                                  70771657 16 +  92629107 ----C----------------C--C-TTTTTAA-TT-tgt-g
i Mus_caroli.LT608236.1                                 C 0 I 11
s Mus_musculus.chr16                                     75493711 16 +  98207768 ----c----------------c--c-tttttat-tt-tgt-g
i Mus_musculus.chr16                                    C 0 I 11
s Mus_pahari.LT608305.1                                  67560086 16 +  89017189 ----c----------------c--c-tttttaa-tt-ctt-t
i Mus_pahari.LT608305.1                                 C 0 I 393
s Mus_spretus.CM004110.1                                 74336437 16 +  97876770 ----c----------------c--c-tttttat-tt-tgt-g
i Mus_spretus.CM004110.1                                C 0 I 11
s Muscardinus_avellanarius.MusAve_scaffold_9643             14680 15 +     98495 ----C----------------C--T-CTTAT-A-TT-CCT-T
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 10 C 0
s Mustela_putorius.JH417978.1                             4428018 15 -  28371801 TCTGC----------------C--C-TTTTT-A-TT------
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myotis_brandtii.KE161952.1                               971121  4 +   8389877 TCTG--------------------------------------
i Myotis_brandtii.KE161952.1                            I 50 C 0
s Myotis_davidii.KB114863.1                               5022542  4 +   6462685 TCCG--------------------------------------
i Myotis_davidii.KB114863.1                             I 50 C 0
s Myotis_lucifugus.GL429887.1                             3468625  4 -   3747815 TCTG--------------------------------------
i Myotis_lucifugus.GL429887.1                           I 50 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        13866  4 +     66751 TCCA--------------------------------------
i Myotis_myotis.MyoMyo_scaffold_6123                    I 50 C 0
s Nannospalax_galili.KL201303.1                            120184 15 +    362372 ----C----------------T--C-TTTAA-A-TT-CCT-A
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4490147 19 -  14209539 TCTGT----------------A--C-TTTTT-A-TT-CCC-A
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3954622 19 -   4490290 TCTGC----------------C--A-TTTTA-A-TT-CCC-A
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  50398  4 +     94413 TCTA--------------------------------------
i Noctilio_leporinus.NocLep_scaffold_12062              I 43 C 0
s Nomascus_annamensis.k141_762468                              51 19 -      2755 TCTGC----------------C--C-TTTTT-A-TT-CCC-A
i Nomascus_annamensis.k141_762468                       C 0 I 155
s Nomascus_concolor.k141_70405                                672 19 +      1153 TCTGC----------------C--C-TTTTT-A-TT-CCC-A
i Nomascus_concolor.k141_70405                          C 0 I 59
s Nomascus_gabriellae.k141_1400361                            602 19 -      2203 TCTGC----------------C--C-TTTTT-A-TT-CCC-A
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_1022                             626 19 -     11638 TCTGC----------------C--C-TTTTT-A-TT-CCC-A
i Nomascus_siki_b.tarseq_1022                       C 0 C 0
s Nomascus_siki_a.k141_421408                                   516 19 +     16235 TCTGC----------------C--C-TTTTT-A-TT-CCC-A
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                37887 19 +   3668941 TCTGC----------------C--C-TTTTA-A-TT-TCC-A
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 I 13
s Nycticebus_bengalensis.LG16                            65571643 19 -  95554990 TCGAC----------------C--C-TTTTT-A-TT-CCC-A
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_771591                            15052 19 +     16181 TCGAC----------------C--C-TTTTT-A-TT-CCC-A
i Nycticebus_coucang.k141_771591                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65679839 19 +  89412551 TCGAC----------------C--C-TTTTT-A-TT-CCC-A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Odobenus_rosmarus.KB229369.1                             684850 19 -   3126709 TCTGT----------------A--C-TTTTT-A-TT-CCC-A
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1083466 19 +   1425656 TTTGT----------------C--C-TTTTA-A-TT-CCC-A
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         41549 19 +     78940 TTTGC----------------C--C-TTATA-A-TT-CCC-A
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  130228 14 +    145789 ----T----------------A--C-CC-TT-T-TT-CTC-A
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  42920 15 +     62360 ----C----------------A--A-CTTTT-A-TT-CCC-A
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7228298 19 -   7562323 TCTGC----------------C--A-TTTTA-A-TT-CCC-A
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              64077 18 -     66828 -CTGC----------------C--C-TTTTT-G-TT-CCC-A
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141883688 19 + 163896628 TCTGC----------------C--C-TTTTA-A-TT-CCC-A
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      315025 19 -    505867 TCTGC----------------C--C-TTTCA-A-TT-TCC-A
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 I 13
s Otolemur_crassicaudatus.k141_505435                        4992 19 -     53940 TCTAC----------------C--C-TTTTT-A-TT-CCC-A
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18012965 19 -  38779656 TCTAC----------------C--C-TTTTT-A-TT-CCC-A
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134082471 19 - 275406953 TTTGC----------------C--C-TTTTA-A-TT-CCC-A
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      83706 19 +    140051 TTTGC----------------C--C-TTATA-A-TT-CCC-A
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127578346 19 - 205426864 TCTGC----------------C--C-TTTTT-A-TT-CTC-A
i Pan_paniscus.CM003386.1                               C 0 I 13
s Pan_troglodytes.CM009241.2                            120155506 19 - 196562556 TCTGC----------------C--C-TTTTT-A-TT-CTC-A
i Pan_troglodytes.CM009241.2                            C 0 I 52
s Panthera_onca.PanOnc_flattened_line_1615                  39758 10 +    295523 ----------------------------TTT-A-TT-CTC-A
i Panthera_onca.PanOnc_flattened_line_1615              I 6 C 0
s Panthera_pardus.KV860323.1                              3643573 10 +  18214204 ----------------------------TTT-A-TT-CTC-A
i Panthera_pardus.KV860323.1                            I 6 C 0
s Panthera_tigris.KE721879.1                              5033221 10 -   6340057 ----------------------------TTT-A-TT-CTC-A
i Panthera_tigris.KE721879.1                            I 6 C 0
s Pantholops_hodgsonii.KE114631.1                         1071347 19 -   1292953 TGTGC----------------C--C-TTTTA-A-TT-CCC-A
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188160226 19 - 188283584 TCTGC----------------C--C-TTTTT-A-TT-CCC-A
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              3316 19 +     25005 TCTGC----------------C--C-TTTTT-A-TT-CCC-A
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47517598 19 +  47705337 TCTGC----------------C--C-TTTTT-A-TT-CCC-A
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 71589 19 -    104429 TCTGC----------------C--C-TTTTT-A-TT-CCC-A
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   10121 19 +     14967 TCTGC----------------C--C-TTTTT-A-TT-CCC-A
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 5986 19 -      7628 TCTGC----------------C--C-TTTTT-A-TT-CCC-A
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    121250 19 -    135482 TATGT----------------C--T-TTTTT-A-TT-CTC-A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          10665 19 -     23713 TCTAC----------------C--C-TTTTG-A-TT-CCC-A
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           11805 19 +     61070 TCTAC----------------C--C-TTTTG-A-TT-CCC-A
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       2090 15 +     49596 ----C----------------C--T-CTTTT-A-TT-CCC-A
i Perognathus_longimembris.PerPac_flattened_line_19359  I 16 I 1
s Peromyscus_maniculatus.KI615518.1                       4955283 15 -   8017169 ----C----------------A--T-CTTTT-A-TT-CCC-A
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    17127 31 -     36578 ----TGATATAAAACTATATTC--T-TTTTT-A-TT-CCC-A
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              2763 19 +      8220 TCTGC----------------C--A-TTTTA-A-TT-CCC-A
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            99411  4 +    112873 TCTG--------------------------------------
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        I 48 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           9234 19 +     21690 TCTGC----------------C--A-TTTTA-A-TT-CCC-A
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       25921 19 +     44506 TCTGT----------------C--C-TTTTT-A-TT-ACC-A
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        26134 19 +     67491 TCTGT----------------C--C-TTTTT-A-TT-ACC-A
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      16373 19 -     98129 TCTGT----------------C--C-TTTTT-A-TT-ACC-A
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     25974 19 +    147771 TCTGT----------------C--C-TTTTT-A-TT-ACC-A
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         2609 19 -     43940 TCTGT----------------C--C-TTTTT-A-TT-ACC-A
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          6692 19 -     55515 TCTGT----------------C--C-TTTTT-A-TT-ACC-A
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         26046 19 +    152463 TCTGT----------------C--C-TTTTT-A-TT-ACC-A
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       3854 19 -    119457 TCTGT----------------C--C-TTTTT-A-TT-ACC-A
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         15769 19 +    134592 TCTGT----------------C--C-TTTTT-A-TT-ACC-A
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          26356 19 -     75465 TCTGT----------------C--C-TTTTT-A-TT-ACC-A
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              190969 19 -    373494 TCTGC----------------C--C-TTTTT-A-TT-CCC-A
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19811616 19 +  19899266 TCTGC----------------C--C-TTTTT-A-TT-CCC-A
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                3785 19 -      9567 TCTTC----------------C--T-TTTTT-A-TT-CCT-A
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 I 2
s Prolemur_simus.MPIZ01000048.1                           6852588 18 +  12164890 TCTGC----------------C--C-TTTGT-A-TT-CC--A
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     21617 16 -     30946 tcTGC----------------C--C-TTTTT-A-TT-C----
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         7672 19 +     11805 TCTGC----------------C--C-TTTTT-A-TT-CC-CA
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           47007 19 +     52369 TCTGC----------------C--C-TTTTT-A-TTTCC--A
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         39394 19 -     44753 TCTGC----------------C--C-TTTTT-A-TTTCC--A
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            21317 19 +     27322 TCTGC----------------C--C-TTTTT-A-TTTCC--A
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       20965 19 -     53241 TCTGC----------------C--C-TTTTT-A-TTCCC--A
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         43228 19 -     48185 TCTGC----------------C--C-TTTTT-A-TTCCC--A
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           38073 15 +     77221 ----C----------------C--C-TTTTG-A-CT-TCT-G
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            5953  4 -     27784 TTGG--------------------------------------
i Pteronotus_parnellii.KE867983.1                       I 49 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        250141 19 -    344369 TCTGC----------------C--C-TTTTT-A-TT-CCC-A
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Puma_concolor.QAVW01000427.1                          131539869 10 - 161321710 ----------------------------TTT-A-TT-CTC-A
i Puma_concolor.QAVW01000427.1                          I 6 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                20330 19 +     68503 TTTGT----------------C--C-TTTTA-A-TT-CCC-A
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13917487 15 +  90463843 ----C----------------T--C-GTTTT-A-TT-TGT-G
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1792442 19 +   2252614 TCTGC----------------C--C-TTTTT-G-TT-CCC-A
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                       740 19 -      4338 TTTGC----------------C--C-TTTTA-A-TT-CCC-A
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15676378 19 -  43202129 TCTGT----------------C--C-TTTTT-A-TT-ACC-A
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        8291 19 +     34089 TCTGT----------------C--C-TTTTT-A-TT-ACC-A
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              8231 19 -     60842 TCTGT----------------C--C-TTTTT-A-TT-ACC-A
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              8325 19 +     67014 TCTGT----------------C--C-TTTTT-A-TT-ACC-A
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              8302 19 +     60816 TCTGT----------------C--C-TTTTT-A-TT-ACC-A
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 8239 19 -     76454 TCTGT----------------C--C-TTTTT-A-TT-ACC-A
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17345026 19 -  30362882 TCTGT----------------C--C-TTTTT-A-TT-ACC-A
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         24347 19 -     62485 TCTGT----------------C--C-TTTTT-A-TT-ACC-A
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   39471 19 -    114521 TCTGC----------------C--C-TTCCT-A-TT-TTT-A
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 I 1
s Sigmodon_hispidus.SigHis_scaffold_11332                  104848 15 -    120886 ----C----------------A--C-ATTTT-A-TT-CCC-C
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            23395 19 +    739146 TCTGT----------------C--T-TTTTT-A-AT-CCC-A
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17769852 18 -  27805282 TCTG-----------------T--C-TTTAC-A-TT-CCT-C
i Sorex_araneus.JH798170.1                              C 0 I 20
s Spermophilus_dauricus.KZ294190.1                        2243890 15 +   2842873 ----A----------------A--C-GTTTT-A-GC-CCG-A
i Spermophilus_dauricus.KZ294190.1                      I 14 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             238659 12 -    276980 TCAAC----------------C--C-TTTTT-----------
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 I 6
s Suricata_suricatta.SurSur_flattened_line_20339            33066 18 +     62062 TCTGT----------------C--T-T-TTT-A-TT-CTC-A
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189274839 19 + 218635234 TCTGC----------------C--C-TTTTG-A-TG-CCC-A
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        18639 19 -  13920577 TCTGC----------------A--C-TTTTT-A-TT-CCC-A
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                2186  4 +     20549 TCTG--------------------------------------
i Tadarida_brasiliensis.TadBra_scaffold_61492           I 51 C 0
s Tapirus_indicus.TapInd_scaffold_176                      810625 19 +   1148477 CCTGC----------------C--C-TTTTT-A-TT-CCA-A
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  61267 19 +     99546 CCTGC----------------C--C-TTTTT-A-TT-CCA-A
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               31212 19 +     42269 TTTGT----------------C--C-TTTTT-A-TT-CCC-A
i Tarsius_lariang.k141_609102                           C 0 I 3
s Tarsius_wallacei.k141_48636                               64521 19 +     65473 TTTGT----------------C--C-TTTTT-A-TT-CCC-A
i Tarsius_wallacei.k141_48636                           C 0 I 3
s Theropithecus_gelada.CM009951.1                       194011759 19 - 194193292 TCTGC----------------C--C-TTTTT-A-TT-CCC-A
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  137951  4 -    259118 TTTG--------------------------------------
i Tonatia_saurophila.TonSau_scaffold_3334               I 50 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   9367 19 +     90398 TTTGC----------------C--C-TTTAA-A-TT-CCC-A
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16089678 19 +  31416278 TCTGC----------------C--C-TTTTT-A-TT-CCC-A
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2797592 19 -   3938065 TCtgt----------------c--t-tttct-a-tt-tca-a
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    9521 19 +     13056 TCTGT----------------C--T-TTTTT-A-TT-TCA-A
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69317027 19 -  96451834 TCTGC----------------C--A-TTTTA-A-TT-CCC-A
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_69449                   9994 19 +     10241 TCTGC----------------T--C-TTTCT-A-CT-TCT-A
i Uropsilus_gracilis.UroGra_scaffold_69449              C 0 N 0
s Ursus_maritimus.KK498671.1                              6520324 10 +  28682327 ----------------------------TTT-A-TT-CCC-A
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  9230 18 -     20643 TCTGC----------------C--C-TTTGT-A-TT-CC--A
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             28765 18 -     33872 TCTGC----------------C--C-TTTGT-A-TT-CC--A
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1528061 19 -   2331223 TCTGC----------------C--C-TTTTA-A-TT-CCC-A
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                144252 19 -    281493 TCTGC----------------C--C-TTTTA-A-TT-TCC-A
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 I 13
s Xerus_inauris.XerIna_scaffold_7898                       131392 15 -    134049 ----A----------------C--C-TTTTT-A-GT-CCC-A
i Xerus_inauris.XerIna_scaffold_7898                    I 14 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        219706 19 -    227762 TCTGT----------------A--C-TTTTT-A-TT-CCC-A
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_256618                      324 15 -      2259 ----C---------------TT--C-TTTAA-A-TT-CTC--
i Zapus_hudsonius.ZapHud_scaffold_256618                C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            1771 19 -     13665 TCTGC----------------C--A-TTTTA-A-TT-CCC-A
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Dinomys_branickii.DinBra_scaffold_1996                   158442 1030 +    228994 I
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           4051 456 -      6963 I
e Ochotona_princeps.JH802095.1                            4999348 675 -  23139505 I
e Tamandua_tetradactyla.TamTet_scaffold_26877               16259 379 +     45698 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             6589 379 -      8794 I
e Kogia_breviceps.KogBre_flattened_line_35920               27132 184 +     37189 I
e Hyaena_hyaena.HyaHya_flattened_line_20729                 22998  0 -     67322 C
e Elephantulus_edwardii.JH947210.1                        7830035 1277 +  15467074 I
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Echinops_telfairi.JH980316.1                           22999931  2 -  44670279 I
e Dasypus_novemcinctus.JH568778.1                          185121 383 -   6883506 I
e Choloepus_hoffmanni.KN194586.1                           763329 503 +    964067 I
e Choloepus_didactylus.ChoDid_scaffold_36182                18024 504 -     21363 I
e Trachypithecus_pileatus.k141_1022309                       5226  0 +     13828 C
e Trachypithecus_phayrei.ctg3                            44662914  0 -  44834318 C
e Trachypithecus_obscurus.k141_1115109                       8130  0 -     28054 C
e Trachypithecus_melamera.k141_699241                        2986  0 -     24393 C
e Trachypithecus_leucocephalus.k141_381681                   3005  0 +     12481 C
e Trachypithecus_laotum.k141_760702                          4719  0 +     14371 C
e Trachypithecus_hatinhensis.k141_504423                     6067  0 -     15592 C
e Trachypithecus_germaini.k141_868450                        3883  0 -     11566 C
e Trachypithecus_geei.k141_670367                           46082  0 -     54611 C
e Trachypithecus_francoisi.k141_768164                       4689  0 -     14244 C
e Trachypithecus_cristatus.k141_1011511                      5261  0 -     12939 C
e Trachypithecus_crepusculus.k141_1588528                   23360  0 -     32910 C
e Trachypithecus_auratus.k141_738098                        29800  0 +     38948 C
e Semnopithecus_vetulus.k141_1143185                        16479  0 +     30600 C
e Semnopithecus_schistaceus.k141_387461                     33457  0 +     42640 C
e Semnopithecus_priam.k141_410937                           40312  0 +     46263 C
e Semnopithecus_johnii.k141_785014                         121532  0 +    130994 C
e Semnopithecus_hypoleucos.k141_761524                      11528  0 +     20762 C
e Semnopithecus_entellus.k141_1572367                        6153  0 +     15331 C
e Rhinopithecus_strykeri.ctg4                            44859307  0 -  45163003 C
e Rhinopithecus_bieti.k119_554384                            2917  0 -     17045 C
e Pygathrix_nigripes_a.k141_101123                             8537  0 +     18040 C
e Pygathrix_nigripes_b.ctg79                                 6809148  0 +   6970761 C
e Pygathrix_cinerea.k141_374971                             32651  0 +     56732 C
e Presbytis_mitrata.k141_860013                              8661  0 +     14865 C
e Presbytis_comata.k141_672698                               8546  0 -     15069 C
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000036.1               26743271  0 +  26888534 C
e Piliocolobus_kirkii.k141_929665                            4788  0 +      7694 C
e Piliocolobus_gordonorum.k141_1270531                       5421  0 -     17985 C
e Piliocolobus_badius.k141_1987485                           4802  0 -      5908 C
e Octodon_degus.JH651621.1                                3687420 1881 +  10294119 I
e Nasalis_larvatus.k141_153429                              11264  0 +     48152 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     91920 1922 -    117718 I
e Hystrix_cristata.HysCri_scaffold_50788                     7688 1865 +     22540 I
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 32592 1717 -     67205 I
e Colobus_polykomos.k141_1406057                            19335  0 +     23629 C
e Colobus_guereza.LG08                                  147667351  0 + 156195979 C
e Colobus_angolensis.KN985967.1                          10889423  0 +  10971483 C
e Chinchilla_lanigera.JH721867.1                         15963245 964 +  43084221 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               17382 58 +    209709 AG-A-G-GAAG--AATGG-CC--AA--CTAC--C--TTA-------AG-AAaa-----a----gttag----a-aaaa--ctttc---a-----t---a-at---tt---------t-t-t----A
s Acinonyx_jubatus.LLWD01000356.1                         2039354 58 +   3721120 G--GAG-GAAG--TACAG-GC--AA--CTAT--A--CTA-------CACAAAA-GTTTA--------G----A-Agaa--ctttt---a-----t---a-at---ta---------t-t-t-----
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    117622 36 -    189883 ------------------------------------TTA-------AGCACAA-----A----GCTAA----A-AGAA--CTTCC---A-----T---ATA----AT---------T-T-T-----
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 17 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10663040 57 +  23371972 G--GAG-GAAG--TATAG-GC--AA--CTAT--A--TTA-------CACACAAA-GTTA--------G----A-GGaa---tctt---a-----t---a-at---ta---------t-t-t-----
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7099837 57 -  16596857 A--GAG-GAAC--TATAG-GC--GA--CTAT--A--TTA-------TATACAAA-GTTA--------g----a-agaa---tttt---a-----t---a-at---tg---------t-t-t-----
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   21563 53 -     22067 --------AAG--AATGA-TC--AA--CTAT--A--TGA-------TGCACAA-----A----GTTAA----A-AGAG--CTTTC---A-----T---AAA----AT---------T-T-T-----
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   5254 59 -     60446 AG-A-G-GAAG--AATGG-CC--AA--CCAC--C--TTA-------AGCTCAA-----A----GTTAG----A-AAAA--CTTTC---A-----T---A-AC---TT---------T-T-T----A
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         5971 59 -     29318 AG-A-G-GAAG--AATGG-CC--AA--CCAC--C--TTA-------AGCACAA-----A----GTTAG----A-AAAA--CTTTC---A-----T---A-AT---TT---------T-T-T----A
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         4909 59 +     38766 AG-A-G-GAAG--AATGG-CC--AA--CCAC--C--TTA-------AGCACAA-----A----GTTAG----A-AAAA--CTTTC---A-----T---A-AT---TT---------T-T-T----A
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          5865 59 -     80423 AG-A-G-GAAG--AATGG-CC--AA--CCAC--C--TTA-------AGCACAA-----A----GTTAG----A-AAAA--CTTTC---A-----T---A-AT---TT---------T-T-T----A
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                               837 59 +     19852 AG-A-G-GAAG--AATGG-CC--AA--CTAC--C--TTA-------AGCACAA-----A----GTTAG----A-AAAA--ATTGT---G-----T---A-AT---TT---------T-T-T----A
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                3093 59 -     12443 AG-A-G-GAAG--AATGG-CC--AA--CTAC--C--TTA-------AGCACAA-----A----GTTAG----A-AAAA--ATCGT---G-----T---A-AT---TT---------T-T-T----A
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                              392 59 +      5070 AG-A-G-GAAG--AATGG-CC--AA--CTAC--C--TTA-------AGCACAA-----A----GTTAG----A-AAAA--ATTGT---G-----T---A-AT---TT---------T-T-T----A
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                  137 59 -      1641 AG-A-G-GAAG--AATGG-CC--AA--CTAC--C--TTA-------AGCACAA-----A----GTTAG----A-AAAA--ATCGT---G-----T---A-AT---TT---------T-T-T----A
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          2876 59 -     24210 AG-A-G-GAAG--AATGG-CC--AA--CTAC--C--TTA-------AGCACAA-----A----GTTAG----A-AAAA--ATCGT---G-----T---A-AT---TT---------T-T-T----A
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           29458 59 -     30219 AG-A-G-GAAG--AATGG-CC--AA--CTAC--C--TTA-------AGCACAA-----A----GTTAG----A-AAAA--ATCGT---G-----T---A-AT---TT---------T-T-T----A
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_405616                              5294 59 +     16794 AG-A-G-GAAG--AATGA-CC--AA--CTAC--C--TTA-------AGCACAA-----A----GTTAG----A-AAAA--ATCGT---G-----T---A-AT---TT---------T-T-T----A
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                             426 59 -      1470 AG-A-G-GAAG--AATGG-CC--AA--CTAC--C--TTA-------AGCACAA-----A----GTTAG----A-AAAA--ATCGT---G-----T---A-AT---TT---------T-T-T----A
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             4571 59 -      9835 AG-A-G-GAAG--AATGG-CC--AA--CTAC--C--TTA-------AGCACAA-----A----GTTAG----A-AAAA--ATCGT---G-----T---A-AT---TT---------T-T-T----A
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3525357 55 +   4113121 A--G-AGGAAG--TATGG-GC--AA--CTAC--A--CTG-------AGCACTC-----T--------G----A-AGAC--CTTTC---A-----T---A-AT---TT---------T-C-T----C
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      392395 49 -    631301 -------------------TC--CT--GAAC--T--TTTCTGCCATTTCGCAA-----T--------G----TTAGAT--CTTTC---A-----T---A-AT---T----------T-T-T----C
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             2788 55 +     55446 A--G-AGGAAG--TATGG-CC--AG--CTAC--A--CTG-------AGCACTC-----T--------G----A-AGAC--CTTTC---A-----T---A-AT---TT---------T-C-T----C
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 66184 59 +     78111 AG-A-G-GAAG--AATGG-CC--AA--CTAC--C--TTA-------AGCACAA-----A----GTTAG----A-AAAA--TTTTT---A-----T---A-AT---TT---------T-T-T----A
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            9130 59 +     22701 AG-G-G-GAAG--AATGG-CC--AA--CTAC--C--TTA-------AGCACAA-----A----GTTAG----A-AAAA--TTTTT---A-----T---A-AT---TT---------T-T-T----A
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5753088 59 +   9889416 AG-A-G-GAAG--AATAG-CC--AA--CTAC--C--TTA-------AGCACAA-----A----gttag----a-aaaa--ttttt---a-----t---a-ag---tt---------t-t-t----a
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             9686 59 -    104377 AG-A-G-GAAG--AATGG-CC--AA--CTAC--C--TTA-------AGCACAA-----A----GTTAG----A-AAAA--TTTTT---A-----T---A-AT---TT---------T-T-T----A
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               9693 59 +     23246 AG-A-G-GAAG--AATGG-CC--AA--CTAC--C--TTA-------AGCACAA-----A----GTTAG----A-AAAA--TTTTT---A-----T---A-AT---TT---------T-T-T----A
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     2224 58 +     11424 AG-A-G-GAAG--AATGG-CC--AA--CTAC--A--TTA-------AGCACAA-----A----GTTAA----A-GAAA--CTTCC---A-----T---A-A----AA---------TTT-T-----
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        6310 55 +      9265 AG-A-G-GAAA--ATTAG-CC--AA--ATAT--G--TTA-------AGTGCAA-----A----TTT-A----A-A-----TTTTT---A-----T---A-AT---TT---------T-T-T----C
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                10819 50 -     29036 -------------------TC--CT--GAAC--T--TTTCTGCCATTTCACAA-----T--------G----TTAGAA--CTTTC---A-----T---A-AT---T-T--------C-A-T----C
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9542979 60 +  39197703 AG-A-G-GAAG--AATGG-CC--AA--CTAC--C--TTA-------AACACAA-----A----GTTAG----A-AAAA--ATTGT---G-----T---A-AT---TT---------T-TTT----A
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             64252 60 +     85812 AG-A-G-GAAG--AATGG-CC--AA--CTAC--C--TTA-------AACACAA-----A----GTTAG----A-AAAA--ATTGT---G-----T---A-AT---TT---------T-TTT----A
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                15265 60 +     89302 AG-A-G-GAAG--AATGG-CC--AA--CTAC--C--TTA-------AACACAA-----A----GTTAG----A-AAAA--ATTGT---G-----T---A-AT---TT---------T-TTT----A
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             19766 60 -     58268 AG-A-G-GAAG--AATGG-CC--AA--CTAC--C--TTA-------AACACAA-----A----GTTAG----A-AAAA--ATTGT---G-----T---A-AT---TT---------T-TTT----A
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             67760 60 +    119057 AG-A-G-GAAG--AATGG-CC--AA--CTAC--C--TTA-------AACACAA-----A----GTTAG----A-AAAA--ATTGT---G-----T---A-AT---TT---------T-TTT----A
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               9729 60 -     25888 AG-A-G-GAAG--AATGG-CC--AA--CTAC--C--TTA-------AACACAA-----A----GTTAG----A-AAAA--ATTGT---G-----T---A-AT---TT---------T-TTT----A
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                10785 55 -     16375 AG-A-G-GAAA--AAT-G-CC--AA--CTAC--A--TTA-------AGCACAC-----A----TTTAA----A-A-----CTCTT---A-----T---G-A-T--TT---------T-T-T----C
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               4401 55 +      6337 AG-A-G-GAAA--AAT-G-CC--AA--CTAC--A--TTA-------AGCACAC-----A----TTTAA----A-A-----CTCTT---A-----T---A-A-T--TT---------T-T-T----C
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26383832 59 +  51448160 A--G-GGGAAG--TATGG-CC--AA--CTAC--A--TTG-------CACACAC-----A--------GTTAAa-agac--atttt---g-----t---a-at---tt---------t-t-t----c
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        9005 59 -     13118 A--G-AGGAGG--TATGG-CC--AA--CTAC--A--TTG-------CGCACAC-----A--------GTTAAA-agac--atttt---g-----t---a-at---tt---------t-t-t----c
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   47819 55 -     72089 A--G-AGGAAG--TATGG-GC--AA--CTAC--A--CTG-------AGTACTC-----T--------G----A-AGAC--CTTTC---A-----T---A-AT---TT---------T-C-T----C
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   301963 55 -   6870073 A--G-AGGAAG--TATGG-CC--AA--CTAC--A--TTG-------AGAACTC-----T--------G----A-AGAC--CTTTC---A-----T---A-AT---TT---------T-C-T----C
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22956061 55 + 161108492 A--G-AGGAAG--TATGG-CC--AA--CTAC--A--TTG-------AGAACTC-----T--------G----A-AGAC--CTTTC---A-----T---A-AT---TT---------T-C-T----C
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     418326 55 +    998990 A--G-AGGAAG--TATGG-CC--AA--CTAC--A--TTG-------AGAACTC-----T--------G----A-AGAC--CTTTC---A-----T---A-AT---TT---------T-C-T----C
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22664715 55 + 158972876 A--G-AGGAAG--TATGG-CC--AA--CTAC--A--TTG-------AGAACTC-----T--------G----A-AGAC--CTTTC---A-----T---A-AT---TT---------T-C-T----C
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               674478 55 +   1914593 A--G-AGGAAG--TATGG-CC--AA--CTAC--A--CTG-------AGAACTC-----T--------G----A-AGAC--CTTTC---A-----T---A-AT---TT---------T-C-T----C
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               117631 61 -    171031 AG-A-G-GAAG--AATGG-CC--AT--CTAT--C--TTA-------AGCACAA-----A----GTTAG----A-AAAAAAATTTT---G-----T---A-AT---TT---------T-T-G----A
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 16651 61 +    125063 AG-A-G-GAAG--AATGG-CC--AT--CTAT--C--TTA-------AGCACAA-----A----GTTAG----A-AAAAAAATTTT---G-----T---A-AT---TT---------T-T-G----A
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                18698 61 -    216513 AG-A-G-GAAG--AATGG-CC--AT--CTAT--C--TTA-------AGCACAA-----A----GTTAG----A-AAAAAAATTTT---G-----T---A-AT---TT---------T-T-G----A
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       11241 61 -    134917 AG-A-G-GAAG--AATGG-CC--AT--CTAT--C--TTA-------AGCACAA-----A----GTTAG----A-AAAAAAATTTT---G-----T---A-AT---TT---------T-T-G----A
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3222970 59 -   8989139 A--A-TGGAAG--TATGG-CC--AG--CTAC--A--CTG-------AACACAC-----AGTTA----G----A-AGAC--CTTTC---A-----T---A-AT---TT---------T-G-T----C
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           400672 59 -  15254737 A--A-TGGAAG--TATGG-CC--AG--CTAC--A--CTG-------AACACAC-----AGTTA----G----A-AGAC--CTTTC---A-----T---A-AT---TT---------T-G-T----C
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2976408 59 +   6889770 A--A-TGGAAG--TATGG-CC--AG--CTAC--A--CTG-------AACACAC-----AGTTA----G----A-AGAC--CTTTC---A-----T---A-AT---TT---------T-G-T----C
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11526204 31 +  39901454 -----------------------------------------------ACACAAA-GTTA--------G----A-AGAA---TTCT---A-----T---A-AT---TA---------T-T-T-----
i CanFam4.chr31                                         I 13 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   21178 31 +     87036 -----------------------------------------------ACACAAA-GTTA--------G----A-AGAA---TTCT---A-----T---A-AT---TA---------T-T-T-----
i Canis_lupus_VD.CanFam_VD_scaffold_16982               I 13 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11272887 31 -  35597290 -----------------------------------------------ACACAAA-GTTA--------G----A-AGAA---TTCT---A-----T---A-AT---TA---------t-t-t-----
i Canis_lupus_dingo.QKWQ01001993.1                      I 13 C 0
s Canis_lupus_familiaris.chr31                           11095598 31 +  39895921 -----------------------------------------------ACACAAA-GTTA--------G----A-AGAA---TTCT---A-----T---A-AT---TA---------t-t-t-----
i Canis_lupus_familiaris.chr31                          I 13 C 0
s Canis_lupus_orion.HG994411.1                           16462383 31 -  44759192 -----------------------------------------------ACACAAA-GTTA--------G----A-AGAA---TTCT---A-----T---A-AT---TA---------t-t-t-----
i Canis_lupus_orion.HG994411.1                          I 13 C 0
s Capra_aegagrus.CM003214.1                              21330437 55 + 157394656 A--G-AGGAAG--TATGG-GC--AA--CTAC--A--CTG-------AGCACTC-----T--------G----A-AGAC--CTTTC---A-----T---A-AT---TT---------T-C-T----C
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135711654 55 - 157403528 A--G-AGGAAG--TATGG-GC--AA--CTAC--A--CTG-------AGCACTC-----T--------G----A-AGAC--CTTTC---A-----T---A-AT---TT---------T-C-T----C
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          313377 53 +    345090 ---------AG--AATGA-CC--AA--CTAC--A--TTA-------AGCACAA-----A----GTTAG----A-AAAA--GTTTC---A-----C---A-AT---TT---------T-T-T----T
i Carlito_syrichta.NW_007248099.1                       I 3 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               61605 37 +     67245 -------------------TC--CT--GAAC--T--TTTCTGCCATTTCACAA-----T--------G----TTAGAA--CTT-------------------------------------------
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 I 9
s Castor_canadensis.CasCan_scaffold_417865                     41 34 -       402 -----------------------------------------------ACACAA-----A-AAAAAAAA----A-AGAA--CTTCT---A-----C---A-A----TT---------T-T-T-----
i Castor_canadensis.CasCan_scaffold_417865              N 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   162500 55 -    276539 A--G-AAAATG--TATGG-CC--AG--CTAC--A--CTG-------AACACAC-----A--------T----A-AAAC--CTTTC---A-----T---A-AT---TT---------T-T-T----C
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15789508 49 -  24422027 TG-A-A-GAAG--AATGA-CCAAC----TAC--A--ATA-------AACATAA-----A----GTTTA----A-ATAA--CTTTC---A-------------------------------------
i Cavia_aperea.AVPZ01000278.1                           C 0 I 6
s Cavia_porcellus.DS562889.1                             15801447 49 -  24440124 TG-A-A-GAAG--AATGA-CCAAC----TAC--A--ATA-------AACATAA-----A----GTTTA----A-ATAA--CTTTC---A-------------------------------------
i Cavia_porcellus.DS562889.1                            C 0 I 6
s Cavia_tschudii.CavTsc_scaffold_488                       179619 49 +    436027 TG-A-A-GAAG--AATGA-CCAAC----TAC--A--ATA-------AACATAA-----A----GTTTA----A-ATAA--CTTTC---A-------------------------------------
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 I 6
s Cebus_albifrons.Contig22                               18894464 59 -  29618158 AG-A-G-GAAG--AATGG-CC--AA--CTAC--C--TTA-------AGCACAA-----A----GTTAG----A-AAAA--TTTTT---A-----T---A-AT---TT---------T-T-T----A
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                12008 59 -     26817 AG-A-G-GAAG--AATGG-CC--AA--CTAC--C--TTA-------AGCACAA-----A----GTTAG----A-AAAA--TTTTT---A-----T---A-AT---TT---------T-T-T----A
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                16252 59 +     25043 AG-A-G-GAAG--AATGG-CC--AA--CTAC--C--TTA-------AGCACAA-----A----GTTAG----A-AAAA--TTTTT---A-----T---A-AT---TT---------T-T-T----A
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                        12392 53 +     21754 ---------AG--AATGA-CC--AA--CTAC--A--TTA-------AGCACAA-----A----GTTAG----A-AAAA--GTTTC---A-----C---A-AT---TT---------T-T-T----T
i Cephalopachus_bancanus.k141_702587                    I 3 C 0
s Ceratotherium_simum.JH767818.1                          4367407 59 +   7569818 A-GA-A-GAAG--TATGG-CC--AA--CTAC--A--TTG-------AGCACAAA-GTTA--------G----A-Agaa--ctttc---a-----t---a-at---tt---------t-t-t----c
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         7164 59 -      9338 A-GA-A-GAAG--TATGG-CC--AA--CTAC--A--TTG-------AGCACAAA-GTTA--------G----A-AGAA--CTTTC---A-----T---A-AT---TT---------T-T-T----C
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6559195 59 +   6739814 AG-A-G-GAAG--AATGG-CC--AA--CCAC--C--TTA-------AGCACAA-----A----GTTAG----A-Aaaa--ctttc---a-----t---a-at---tt---------t-t-t----a
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      30672 59 +     60454 AG-A-G-GAAG--AATGG-CC--AA--CCAC--C--TTA-------AGCACAA-----A----GTTAG----A-AAAA--CTTTC---A-----T---A-AT---TT---------T-T-T----A
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          5876 59 -     21101 AG-A-G-GAAG--AATGG-CC--AA--CCAC--C--TTA-------AGCACAA-----A----GTTAG----A-AAAA--CTTTC---A-----T---A-AT---TT---------T-T-T----A
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         63186 59 -    107033 AG-A-G-GAAG--AATGG-CC--AA--CCAC--C--TTA-------AGCACAA-----A----GTTAG----A-AAAA--CTTTC---A-----T---A-AT---TT---------T-T-T----A
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        6049 59 -     17608 AG-A-G-GAAG--AATGG-CC--AA--CCAC--C--TTA-------AGCACAA-----A----GTTAG----A-AAAA--CTTTC---A-----T---A-AT---TT---------T-T-T----A
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          3214 59 +     45019 AG-A-G-GAAG--AATGG-CC--AA--CCAC--C--TTA-------AGCACAA-----A----GTTAG----A-AAAA--CTTTC---A-----T---A-AT---TT---------T-T-T----A
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           3274 59 +     15177 AG-A-G-GAAG--AATGG-CC--AG--CCAC--C--TTA-------AGCACAA-----A----GTTAG----A-AAAA--CTTTC---A-----T---A-AT---TT---------T-T-T----A
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          6096 59 +     16677 AG-A-G-GAAG--AATGG-CC--AA--CCAC--C--TTA-------AGCACAA-----A----GTTAG----A-AAAA--CTTTC---A-----T---A-AT---TT---------T-T-T----A
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           28286 59 +     35983 AG-A-G-GAAG--AACGG-CC--AA--CCAC--C--TTA-------AGCACAA-----A----GTTAG----A-AAAA--CTTTC---A-----T---A-AT---TT---------T-T-T----A
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11994817 59 +  12117833 AG-A-G-GAAG--AATGG-CC--AA--CCAC--C--TTA-------AGCACAA-----A----GTTAG----A-AAAA--CTTTC---A-----T---A-AT---TT---------T-T-T----A
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46481578 59 +  46592721 AG-A-G-GAAG--AACGG-CC--AA--CCAC--C--TTA-------AGCACAA-----A----GTTAG----A-AAAA--CTTTC---A-----T---A-AT---TT---------T-T-T----A
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      45127 59 -     45581 AG-A-G-GAAG--AATGG-CC--AA--CCAC--C--TTA-------AGCACAA-----A----GTTAG----A-AAAA--CTTTC---A-----T---A-AT---TT---------T-T-T----A
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       6110 59 +     35577 AG-A-A-GAAG--AATGG-CC--AA--CCAC--C--TTA-------AGCACAA-----A----GTTAG----A-AAAA--CTTTC---A-----T---A-AT---TT---------T-T-T----A
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        5904 59 -     25661 AG-A-G-GAAG--AATGG-CC--AA--CCAC--C--TTA-------AGCACAA-----A----GTTAG----A-AAAA--CTTTC---A-----T---A-AT---TT---------T-T-T----A
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        5861 59 -     17744 AG-A-G-GAAG--AACGG-CC--AA--CCAC--C--TTA-------AGCACAA-----A----GTTAG----A-AAAA--CTTTC---A-----T---A-AT---TT---------T-T-T----A
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        25445 59 +     37128 AG-A-G-GAAG--AATGG-CC--AG--CCAC--C--TTA-------AGCACAA-----A----GTTAG----A-AAAA--CTTTC---A-----T---A-AT---TT---------T-T-T----A
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           4507 37 -      6963 ---------AA--TAGGG-CC--AA--ATAC--C--CAA-------AGCACAA-----A--------G----A-ATAA--CTTT------------------------------------------
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      I 456 C 0
s Cheirogaleus_major.k141_1157592                           63009 56 -     68416 AG-A-G-GAAA--AATAG-CC--AA--CTAC--A--TTA-------AACACAT-----A----TTTAA----A-A-----CTTTT---A-----T---A-A-T--TT---------T-T-T----C
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                           12115 56 +     13308 AA-A-G-GAAA--AATAG-CC--AA--CTAC--A--TTA-------AACACAT-----A----TTTAA----A-A-----CTTTT---A-----T---A-A-T--TT---------T-T-T----C
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             9291 59 -     18223 GG-A-G-GAAG--AATGG-CC--AA--CTAC--C--TTA-------AACACAA-----A----GTTAG----A-AAAA--TTTTT---A-----T---A-AT---CT---------T-T-T----A
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              1030 59 +    188999 GG-A-G-GAAG--AATGG-CC--AA--CTAC--C--TTA-------AACACAA-----A----GTCAG----A-AAAA--TTTTT---A-----T---A-AT---TT---------T-T-T----A
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           45328 59 +     57117 GG-A-G-GAAG--AATGG-CC--AA--CTAC--C--TTA-------AACACAA-----A----GTTAG----A-AAAA--TTTTT---A-----T---A-AT---TT---------T-T-T----A
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          50008 59 +     54541 GG-A-G-GAAG--AATGG-CC--AA--CTAC--C--TTA-------AACACAA-----A----GTTAG----A-AAAA--TTTTT---A-----T---A-AT---TT---------T-T-T----A
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15964209 32 +  43084221 -----------------------T----TAT--A--ATA-------AGTACAA-----a----gttaa----a-ataa--ctttc---a-------------------------------------
i Chinchilla_lanigera.JH721867.1                        I 964 I 6
s Chiropotes_israelita.k141_1189915                         74810 61 +    196370 AG-A-G-GAAG--AACGG-CC--AA--CTAT--C--TTA-------AGCACAC-----A----GTTAG--AAA-AAAA--ATTTT---G-----T---A-AT---TT---------T-T-T----A
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          18991 61 +     40510 AG-A-G-GAAG--AACGG-CC--AA--CTAT--C--TTA-------AGCACAC-----A----GTTAG--AAA-AAAA--ATTTT---G-----T---A-AT---TT---------T-T-T----A
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15143630 59 -  15256731 AG-A-G-GAAG--AATGG-CC--AA--CCAC--C--TTA-------AGCACAA-----A----GTTAG----A-AAAA--CTTCC---A-----T---A-AT---TT---------T-T-T----A
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      38094 59 -     53260 AG-A-G-GAAG--AATGG-CC--AA--CCAC--C--TTA-------AGCACAA-----A----GTTAG----A-AAAA--CTTCC---A-----T---A-AT---TT---------T-T-T----A
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101148653 59 + 101219884 AG-A-G-GAAG--AATGG-CC--AA--CCAC--C--TTA-------AGCACAA-----A----GTTAG----A-aaaa--ctttc---a-----t---a-at---tt---------t-t-t----a
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                18528 53 -     21363 ---------aa--aagaa-cc--aa--ATAT--C--CTA-------AGCACAA-----A----GTTAG----A-ATAA--CTTTT---G-----T---A-AT---TT---------T-A-T----C
i Choloepus_didactylus.ChoDid_scaffold_36182            I 504 C 0
s Choloepus_hoffmanni.KN194586.1                           763832 53 +    964067 ---------aa--aagaa-cc--aa--atat--c--ctA-------AGCACAA-----A----GTTAG----A-ATAA--CTTTT---G-----T---A-AT---TT---------T-A-T----C
i Choloepus_hoffmanni.KN194586.1                        I 503 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_629495              2062 57 -      3120 AG-A-G-GAAA--TATAG--C-CAT--ATAC--ATATTG-------AGCACAA-----A----TTTAG----A-ATAA--CTATC---A-----T---A-AT---TC-------------------
i Chrysochloris_asiatica.ChrAsi_scaffold_629495         C 0 I 4
s Condylura_cristata.JH655880.1                          60622031 50 +  78930452 -----A--AAG--CATGG-TC--AA--CTAC--A--TT--------CTCACAA-----A----G--------A-AGAA--CTTTC---A-----T---AATT----T---------C-T-T----C
i Condylura_cristata.JH655880.1                         I 1 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         2054 55 -      5782 A--A-AGGAAT--TGTGG-CC--AA--GTAC--A--TTG-------ATCACAAA-GTGA--------G----A-AGAA--CTTTC---A-----T---A-AT---TT-------------------
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 I 1
s Cricetomys_gambianus.CriGam_scaffold_949                 282477 58 -    399297 AA-A-G-GAAG--AATGG-CC--AA--CTAC--A--TTA-------AGCACAA-----A----ACTTG----A-GGAA--TTTCC---A-----T---CTA----GT---------T-T-T-----
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53034845 58 +  72327488 AA-G-G-GAAG--GATGG-TA--AA--CAAC--A--TTA-------Agcataa-----a----attta----a-agac--attcC---T-----T---GTA----AT---------T-T-T-----
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              1472 24 -     22648 --------------------------------------------------------------------------------TGAGC---A-----T---G-AT---ACTTC-CTAATT-T-G----T
i Crocidura_indochinensis.CroInd_scaffold_27484         I 19 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            57351 58 -     70449 G--GAG-GAAG--TATAG-GC--AA--CTAT--A--TTA-------CACAAAA-GTTTA--------G----A-AGAA--CTTTT---A-----T---A-AT---TA---------T-T-T-----
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  214208 49 -    956709 -------TAAG--AATGA-CT--AA--CTGC--T--CCA-------GGCATAA-----A----TTTAA----A-AT------TTG---A-----T---A-A----TG---------T-G-T-----
i Ctenodactylus_gundi.CteGun_scaffold_447               I 2 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                20680 49 +     26546 TG-A-A-AAAG--AATGG-CCAAC----AAC--A--GTA-------AGCATAA-----A----GTTAA----A-ATAA--CTTTC---A-------------------------------------
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 I 6
s Dasyprocta_punctata.DasPun_flattened_line_634             61820 49 -    236241 TG-A-A-GAAG--AATGG-CAAAT----TAC--A--ACA-------AACATAA-----A----GTTAA----A-ATAA--CTTTC---A-------------------------------------
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 I 6
s Dasypus_novemcinctus.JH568778.1                          185504 49 -   6883506 ---------aa--taggg-cc--aa--atac--c--caa-------agcacaa-----a--------g----a-aTAA--CTTTC---A-----C---A-AT---TT---------T-T-T----C
i Dasypus_novemcinctus.JH568778.1                       I 383 C 0
s Daubentonia_madagascariensis.ctg11                     16848944 56 +  31942871 AG-A-G-GAAA--AGTGG-TT--AA--CTAC--A--TTA-------GGCACAA-----A----TTTAA----A-A-----CTTTT---A-----T---A-AT---TT---------T-T-T----C
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80040457 57 -  96802777 A--G-AGGAAG--TATGG-CC--AA--CTAC--A--TTG-------TGCA--C-----A--------GTGAAA-agac--atttt---g-----t---a-at---tt---------t-t-t----c
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18701025 53 -  18957592 -------------------TC--CT--GAAC--T--TTTCTGCCATTTCACAA-----A--------G----TCAGAA--CTTTC---A-----TCATA-AA---TT---------T-T-T----C
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 326054 59 +    993696 A-GA-A-GAAG--TATGG-CC--AA--CTAC--A--TTG-------AGCACAAA-GTTA--------G----A-AGaa--ctttc---a-----t---a-at---tt---------t-t-t----c
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   6695 59 +    151128 A-GA-A-GAAG--TATGG-CC--AA--CTAC--A--TTG-------AGCACAAA-GTTA--------G----A-AGAA--CTTTC---A-----T---A-AT---TT---------T-T-T----C
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   159472 32 +    228994 -----------------------C----TAC--A--GTA-------AGTGCAA-----A----GTTAA----A-GTAA--CGTTC---A-------------------------------------
i Dinomys_branickii.DinBra_scaffold_1996                I 1030 I 6
s Dipodomys_ordii.KN672545.1                              3660014 53 +   4240102 -------GAAT--ATTTG-CC--AA--CTAC--A--TTT-------AGCACAA-----A----GTTAA----A-AGAA--CTTTC---A-----C---A-A----AT---------T-T-T-----
i Dipodomys_ordii.KN672545.1                            I 1 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  2362 53 -     11986 -------GAAT--ATTTG-CC--AA--CTAC--A--TTT-------AGCACAA-----A----GTTAA----A-AGAA--CTTTC---A-----C---A-A----AT---------T-T-T-----
i Dipodomys_stephensi.DipSte_scaffold_84338             I 1 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                39791 42 -     73477 ----------G--AATGG-CCAAC----TAC--A--ATA-------AACATGA-----C----ATTAA----A-ATAA--CTTTC---A-------------------------------------
i Dolichotis_patagonum.DolPat_scaffold_14102            I 4 I 6
s Elaphurus_davidianus.JRFZ01086400.1                     1496035 55 +   1727528 G--G-AGGAAG--TATGG-CC--AA--TTAC--A--CTG-------AGCACTC-----T--------G----A-AGAC--CTTTC---A-----T---A-AT---TT---------T-C-T----C
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        243642 58 -    369425 AA-A-G-GAAG--AGTGG-AC--AA--CATT--A--TTA-------AGCACAA-----A----ACTAA----A-AGAA--CTTCC---A-----T---ACA----AT---------T-T-T-----
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01198462.1                           1384 58 -      1901 AA-A-G-GAAG--AATGG-AC--AA--CATT--A--TTA-------AGCACAA-----A----ACTAA----A-AGAA--CTTCC---A-----T---ACA----AT---------T-T-T-----
i Ellobius_talpinus.LOJH01198462.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85877309 57 +  99434291 G--GAG-GAAC--TATAG-GC--AA--CAAT--A--TTA-------TATACAAA-GTTA--------G----a-agaa---tttt---a-----t---a-at---tg---------t-t-t-----
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4708791 43 +   6522550 -------------------TC--CT--GAAC--A--TTG-------AACACGA-----A--------G----TTAAAA--CTTCC---A-----T---A-AT---TT---------T-T-T----C
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5856420 59 -   7175178 A-GA-G-GAAG--TATGG-CC--AA--CTAC--A--TTG-------AGCTCAAA-TTTA--------G----A-Agaa--ctttc---a-----t---a-at---tt---------t-t-t----c
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13354920 59 +  41866177 A-GA-G-GAAG--TATGG-CC--AA--CTAC--A--TTG-------AGCTCAAA-TTTA--------G----A-Agaa--ctttc---a-----t---a-at---tt---------t-t-t----c
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          16410 59 +     92910 A-GA-G-GAAG--TATGG-CC--AA--CTAC--A--TTG-------AGCTCAAA-TTTA--------G----A-Agaa--ctttc---a-----t---a-at---tt---------t-t-t----c
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11540870 33 +  16010500 A--C-A-TAAG--CTTGG-TC--AG--CCAC--A--TTA-------AATACAA-----G----C--------------------------------------------------------------
i Erinaceus_europaeus.JH835290.1                        C 0 I 103
s Erythrocebus_patas.Contig8                             48780663 59 -  48907691 AG-A-G-GAAG--AATGG-CC--AA--CCAC--C--TTA-------AGCACAA-----A----GTTAG----A-AAAA--CTTTC---A-----T---A-AT---TT---------T-T-T----A
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          318675 59 +    330699 A--G-AGGAAG--TATGG-CC--AA--CTAC--A--TTG-------CGCACAC-----A--------GTTAAA-AGAC--ATTTT---G-----T---A-AT---TT---------T-T-T----C
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             65132 59 +     89355 A--G-AGGAAG--TATGG-CC--AA--CTAC--A--TTG-------CGCACAC-----A--------GTTAAA-AGAC--ATTTT---G-----T---A-AT---TT---------T-T-T----C
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              9096 56 +     13586 AG-A-G-GAAA--ACTAA-CC--AA--TTAC--A--TTA-------AGCACAT-----A----TTTAA----A-A-----CTTTT---A-----T---A-AT---TT---------T-T-T----C
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_1015201                              2359 56 -      4292 AG-A-C-GAAA--ACTAA-CC--AA--TTAC--A--TTA-------AGCACAT-----A----TTTAA----A-A-----CTTTT---A-----T---A-AT---TT---------T-T-T----C
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            15492 56 +     36558 AG-A-G-GAAA--ACTAA-CC--AA--TTAC--A--TTA-------AGCACAT-----A----TTTAA----A-A-----CTTTT---A-----T---A-AT---TT---------T-T-T----C
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            11817 56 +     60246 AG-A-G-GAAA--ACTAA-CC--AA--TTAC--A--TTA-------AGCACAT-----A----TTTAA----A-A-----CTTTA---A-----T---A-AT---TA---------T-T-T----C
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                15300 56 +    109717 AG-A-G-GAAA--ACTAA-CC--AA--TTAC--A--TTA-------AGCACAT-----A----TTTAA----A-A-----CTTTT---A-----T---A-AT---TT---------T-T-T----C
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 3285 56 -     19505 AG-A-G-GAAA--ACTAA-CC--AA--TTAC--A--TTA-------AGCACAT-----A----TTTAA----A-A-----CTTTA---A-----T---A-AT---TA---------T-T-T----C
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                19957 56 +     27497 AG-A-G-GAAA--ACTAA-CC--AA--TTAC--A--TTA-------AGCACAT-----A----TTTAA----A-A-----CTTTT---A-----T---A-AT---TT---------T-T-T----C
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           22413 56 +     26808 AG-A-G-GAAA--ACTAA-CC--AA--TTAC--A--TTA-------AGCACAT-----A----TTTAA----A-G-----CTTTT---A-----T---A-AT---TT---------T-T-T----C
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                37148 56 +     46535 AG-A-C-GAAA--ACTAA-CC--AA--TTAC--A--TTA-------AGCACAT-----A----TTTAA----A-A-----CTTTT---A-----T---A-AT---TT---------T-T-T----C
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              19887 56 -     29447 AG-A-G-GAAA--ACTAA-CC--AA--TTAC--A--TTA-------AGCACAT-----A----TTTAA----A-A-----CTTTT---A-----T---A-AT---TT---------T-T-T----C
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.AANG03133801.1                                  411 40 -       736 ----------------------------TAT--A--CTA-------CACAAAA-GTTTA--------G----A-Agaa--ctttt---a-----t---a-at---ta---------t-t-t-----
i Felis_catus.AANG03133801.1                            I 11 C 0
s Felis_catus_fca126.CM031420.1                         129285749 58 - 158578461 G--GAG-GAAG--TACAG-GC--AA--CTAT--A--CTA-------CACAAAA-GTTTA--------G----A-Agaa--ctttt---a-----t---a-at---ta---------t-t-t-----
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 26848 58 +     52776 G--GAG-GAAG--TACAG-GC--AA--CTAT--A--CTA-------CACAAAA-GTTTA--------G----A-AGAA--CTTTT---A-----T---A-AT---TA---------T-T-T-----
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13895970 49 -  19261668 TG-A-G-GAAG--AATGG-CC--A----ACTACA--ATA-------AGTACAA-----A----GTTTA----A-ATAA--CTTTC---A-------------------------------------
i Fukomys_damarensis.KN123630.1                         C 0 I 6
s Galago_moholi.ctg555                                     215151 55 -    847004 AG-A-G-GAAA--AATAG-CC--AA--ATAT--G--TTA-------AGTGCAA-----A----TTT-A----A-A-----CTTTT---A-----C---A-AT---TC---------T-T-T----C
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           17512 55 -     43889 AG-A-G-GAAA--AATAG-CC--AA--ATAT--G--TTA-------AGTGCAA-----A----TTT-A----A-A-----CTTTT---A-----C---A-AT---TC---------T-T-T----C
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          14655 55 +     27357 AG-A-G-GAAA--AATAG-CC--AA--ATAT--G--TTA-------AGCGCAA-----A----TTT-A----A-A-----CTTTT---A-----C---A-AT---TT---------T-T-T----C
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               159395 56 +    324696 AG-A-A-GAAG--AATGG-CC--AA--CTCC--A--TTA-------AGCACAA-----T----GTTAG----G-A-----CTTTC---A-----T---A-AT---AT---------T-T-T----C
i Galeopterus_variegatus.GalVar_scaffold_354            I 6 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    185833 55 -    189561 A--G-AGGAAG--TATGG-CC--AA--CTAC--A--CTG-------AGCACTC-----C--------G----A-AGAC--CTTTC---A-----T---A-AT---TT---------T-C-T----C
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           16288 58 -     18683 AG-A-G-GAAG--AATGG-CC--AA--CTAT--A--TTA-------AGCACAA-----A----GTTAA----A-AGAA--CTTTC---A-----T---A-A----AT---------TAT-C-----
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               9101 37 -     14630 ------------------------------------TTA-------AGCACAA-----A----GTTAG----A-AAAA--CTTTC---A-----T---A-AT---TT---------T-T-T----A
i Gorilla_beringei.k141_111300                          I 15 C 0
s Gorilla_gorilla.LT578340.1                            119656201 37 - 195582420 ------------------------------------TTA-------AGCACAA-----A----GTTAG----A-Aaaa--ctttc---a-----t---a-at---tt---------t-t-t----a
i Gorilla_gorilla.LT578340.1                            I 15 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   79605 58 +    118900 AG-A-G-GAAA--AATGG-AC--AA--GTAT--A--TTA-------AGCACAA-----A----GTTAA----A-AGAA--CTTTC---A-----T---A-A----AT---------TAT-T-----
i Graphiurus_murinus.GraMur_scaffold_4493               I 3 C 0
s Hapalemur_alaotrensis.k141_1280836                         5880 55 +     10286 AG-A-G-GAAA--ACTAA-TC--AA--CTAC--A--TTA-------AGCACAT-----A----TTTAA----A-A-----CTTTT---A-----T---A-AT---TT---------T-T-C-----
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             4358 55 -     11661 AG-A-G-GAAA--ACTAA-TC--AA--CTAC--A--TTA-------AGCACAT-----A----TTTAA----A-A-----CTTTT---A-----T---A-AT---TT---------T-T-C-----
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             9685 55 +     56096 AG-A-G-GAAA--ACTAA-TC--AA--CTAC--A--TTA-------AGCACAT-----A----TTTAA----A-A-----CTTTT---A-----T---A-AT---TT---------T-T-C-----
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        32934 55 -     42470 AG-A-G-GAAA--ACTAA-TC--AA--CTAC--A--TTA-------AGCACAT-----A----TTTAA----A-A-----CTTTT---A-----T---A-AT---TT---------T-T-C-----
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        49560 55 -     54384 AG-A-G-GAAA--ACTAA-TC--AA--CTAC--A--TTA-------AGCACAT-----A----TTTAA----A-A-----CTTTT---A-----T---A-AT---TT---------T-T-C-----
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              22492 58 +     53719 G--GAG-AAAG--TATAG-GT--AA--CTAT--A--TTA-------CACAAAAA-TTTA--------G----A-AGAA--CTTTT---A-----T---A-AT---TA---------T-T-T-----
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                32704 55 -     91191 A--G-AGTAAG--TATGG-GC--AA--CTAT--A--CTG-------AGCACTC-----T--------G----A-AGAC--TTTTC---A-----T---A-AT---TT---------T-C-T----C
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2560469 49 +  31725842 tg-A-G-GAAG--AATGG-CC--A----ATTACA--ATA-------AGTACAA-----A----gttaa----a-ataa--ctttc---a-------------------------------------
i Heterocephalus_glaber.JH602058.1                      C 0 I 6
s Heterohyrax_brucei.HetBruBak_scaffold_25354               62700 59 +     73687 --------AAG--CATGG-AC--AAATACAA--A--CTG-------AGCACAA-----A----TTTAA----A-ATAA--CTTCC---A-----T---A-TT---TTTT-------T-T-T---TC
i Heterohyrax_brucei.HetBruBak_scaffold_25354           I 2 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              150455 61 +    277961 A--G-AGGCAGTGTATGG-CC--AA--CTAC--A--TTG-------AGCACAC-----A--------GTTAAA-AGAA--CTTCC---G-----T---A-AT---TT---------T-T-T----C
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      282861 59 -    477199 A--G-AGGAAT--TATGG-CC--AA--GTAC--A--TTG-------ATCACAAAA-TTA--------G----A-AGAA--TTTCC---A-----G---A-AG---TT---------T-T-T----T
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959                631 59 +     26078 T--G-AGGAAT--TATGG-CC--AA--GTAC--A--TTG-------ACCACAAAA-TTA--------G----A-AGAA--TTTCC---A-----G---A-AG---TT---------T-T-T----T
i Hipposideros_galeritus.HipGal_scaffold_52959          C 0 I 14
s Hoolock_leuconedys.ctg649                                   108736 59 +    115816 AG-A-G-GAAG--AATGG-CC--AA--CTAC--C--TTA-------AGCACAA-----A----GTTAG----A-AAAA--CTTTC---A-----T---A-AT---TT---------T-T-T----A
i Hoolock_leuconedys.ctg649                                I 128 I 116
s Hyaena_hyaena.HyaHya_flattened_line_20729                 22998 22 -     67322 ----------------------------------------------------------T--------T----A-AAAA--TTTCT---T-----T---A-AT---GT---------T-T-T-----
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 I 1
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           21079 42 -    119109 ----------G--AATGG-TCAAC----TAT--A--ATA-------AACGTAA-----A----GTTAA----A-ATAA--CATTC---A-------------------------------------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       I 4 I 6
s Hylobates_abbotti.k141_1816750                             1565 59 +      3202 AA-A-G-GAAG--AATGG-CC--AA--CTAC--C--TTA-------AGCACAA-----A----GTTAG----A-AAAA--CTTTC---A-----T---A-AT---TT---------T-T-T----A
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1633646                              1535 59 -      2102 AG-A-G-GAAG--AATGG-CC--AA--CTAC--C--TTA-------AGCACAA-----A----GTTAG----A-AAAA--CTTAC---A-----T---A-AT---TT---------T-T-T----A
i Hylobates_agilis.k141_1633646                         C 0 C 0
s Hylobates_klossii.k141_468230                              3052 59 +      5464 AA-A-G-GAAG--AATGG-CC--AA--CTAC--C--TTA-------AGCACAA-----A----GTTAG----A-AAAA--CTTTC---A-----T---A-AT---TT---------T-T-T----A
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14628400 59 -  25970782 AG-A-G-GAAG--AATGG-CC--AA--CTAC--C--TTA-------AGCACAA-----A----GTTAG----A-AAAA--CTTTC---A-----T---A-AT---TT---------T-T-T----A
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                             951 59 +      4161 AA-A-G-GAAG--AATGG-CC--AA--CTAC--C--TTA-------AGCACAA-----A----GTTAG----A-AAAA--CTTTC---A-----T---A-AT---TT---------T-T-T----A
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             36514 53 -     60944 ---------AG--AATGG-CC--AA--CTAC--C--TTA-------AGCACAA-----A----GTTAG----A-AAAA--CTTTC---A-----T---A-AT---TT---------T-T-T----A
i Hylobates_pileatus_a.tarseq_592                         I 6 I 753
s Ictidomys_tridecemlineatus.JH393315.1                   7130200 58 +  13083262 AG-A-A-AAGC--AACAG-CC--AA--CCAC--G--TTA-------AGCATAA-----A----GTCAA----A-AGAA--CATTC---A-----T---A-A----AT---------TTT-T-----
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   1358 39 +      3484 AG-A-G-GAAA--AATAG-CC--AA--CTAC--A--GTA-------AGCACAC-----A----TTTAA----A-----------------------------------------------------
i Indri_indri.k141_2197838                              C 0 I 16
s Inia_geoffrensis.IniGeo_flattened_line_66725              12669 57 +     17520 A--G-AGGAAG--TATGG-CC--AA--CTAC--A--TTG-------TGCA--C-----A--------GTTAAA-AGAC--ATTTT---G-----T---A-AT---TT---------T-T-T----C
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8577256 52 +  11848649 --------AAG--AACAA-TC--AA--CTAT--A--TGA-------TGCACAA-----A-----TTAA----A-AGAA--CTTTC---C-----T---AAA----AT---------T-T-T-----
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               27316 31 +     37189 -------------------------------------------------acgc-----a--------aaaaaa-agaC--ATTTT---G-----T---A-CT---TT---------T-T-T----C
i Kogia_breviceps.KogBre_flattened_line_35920           I 184 C 0
s Lagothrix_lagothricha.k141_12968                          53848 59 -    147782 AG-A-G-GAAG--AATGG-CC--AA--TTAC--C--TTA-------AGCACAA-----A----GTTAG----A-AAAA--ATTGT---G-----T---A-AT---TT---------T-T-T----A
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    5403 43 +     26176 -------------------TC--CT--GAAT--A--TTG-------AGCATGA-----A--------G----TTAAAA--CTTAC---A-----T---A-AT---TT---------T-T-T----C
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258411232 55 - 285822530 AG-A-G-GAAA--ACTAA-CC--AA--CTAC--A--TTA-------AGCACAT-----A----TTTAA----A-A-----CTTTT---A-----T---A-AT---TT---------T-T-C-----
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        28536 56 +     39228 AG-A-G-GAAA--AATAG-CC--AA--CTAC--A--TTA-------AGCACAC-----A----TTTAA----A-A-----CTTTT---A-----T---A-A-T--TT---------T-T-T----C
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            57900 56 +     63517 AG-A-G-GAAA--AATAG-CC--AA--CTAC--A--TTA-------AGCACAC-----A----TTTAA----A-A-----CTTTT---A-----T---A-A-T--TT---------T-T-T----C
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        36280 56 -     38897 AG-A-G-GAAA--AATAG-CC--AA--CTAC--A--TTA-------AGCACAC-----A----TTTAA----A-A-----CTTTT---A-----T---A-A-T--TT---------T-T-T----C
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      2326 56 -     13103 AG-A-G-GAAA--AATAG-CC--AA--CTAC--A--TTA-------AGCACAC-----A----TTTAA----A-A-----CTTTT---A-----T---A-A-T--TT---------T-T-T----C
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3091272 57 -   3498232 G--GAG-GAAG--TGTAG-GC--AA--CTAT--A--TTA-------TGGACAAA-TTTA--------g----a-agaa---tttt---a-----t---a-at---ta---------t-t-t-----
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    20691 59 +     22452 AG-A-G-GAAG---ATGG-TT--AA--CTAC--A--TTA-------AACCCAA-----A----GTTAA--A-A-AGAT--GTTTC---A-----T---A-A----TT---------TCT-T----T
i Lepus_americanus.LepAme_scaffold_62849                C 0 I 3
s Lipotes_vexillifer.KE558548.1                            139603 57 +   3060487 A--G-AGGAAG--TATGG-CC--AA--CTAC--A--TTG-------TGCA--C-----A--------GTTAAA-agac--atttt---g-----t---a-at---tt---------t-t-t----c
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19252283 60 +  19376315 AG-A-G-GAAG--AATGGTCC--AA--CCAC--C--TTA-------AGCATAA-----A----GTTAG----A-AAAA--CTTTC---A-----T---A-AT---TT---------T-T-T----A
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           15099 55 +     84689 AG-A-G-GAAA--AATAG-CC--AA--ATAC--A--TTA-------AGCACAA-----A----TTT-A----A-A-----CTTTT---A-----T---A-AT---TT---------T-T-T----C
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3782838 55 +   6799190 AG-A-G-GAAA--AATAG-CC--AA--ATAC--A--TTA-------AGCACAA-----A----TTT-A----A-A-----CTTTT---A-----T---A-AT---TT---------T-T-T----C
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20598623 63 -  62548349 AG-A-G-GAAA--TACGG-CC--AAATATAC--A--CCG-------AGCACAA-----A----TTTAG----A-ATaa--ctttc---a-----t---a-at---tt-----t---t-t-t---tc
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11095054 31 +  39895028 -----------------------------------------------ACACAAA-GTTA--------G----A-AGAA---TTCT---A-----T---A-AT---TA---------t-t-t-----
i Lycaon_pictus.CM007556.1                              I 13 C 0
s Macaca_arctoides.k141_2201161                             24035 59 +     74745 AG-A-G-GAAG--AATGG-CC--AA--CCAC--C--TTA-------AGCACAA-----A----GTTAG----A-AAAA--CTTTC---A-----T---A-AT---TT---------T-T-T----A
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12710496 59 +  12821369 AG-A-G-GAAG--AATGG-CC--AA--CCAC--C--TTA-------AGCACAA-----A----GTTAG----A-AAAA--CTTTC---A-----T---A-AT---TT---------T-T-T----A
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                3069 59 -     26467 AG-A-G-GAAG--AATGG-CC--AA--CCAC--C--TTA-------AGCACAA-----A----GTTAG----A-AAAA--CTTTC---A-----T---A-AT---TT---------T-T-T----A
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           50940 59 +     63263 AG-A-G-GAAG--AATGG-CC--AA--CCAC--C--TTA-------AGCACAA-----A----GTTAG----A-AAAA--CTTTC---A-----T---A-AT---TT---------T-T-T----A
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 3050 59 -     26361 AG-A-G-GAAG--AATGG-CC--AA--CCAC--C--TTA-------AGCACAA-----A----GTTAG----A-AAAA--CTTTC---A-----T---A-AT---TT---------T-T-T----A
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 6240 59 -      7381 AG-A-G-GAAG--AATGG-CC--AA--CCAC--C--TTA-------AGCACAA-----A----GTTAG----A-AAAA--CTTTC---A-----T---A-AT---TT---------T-T-T----A
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  49469 59 -     79256 AG-A-G-GAAG--AATGG-CC--AA--CCAC--C--TTA-------AGCACAA-----A----GTTAG----A-AAAA--CTTTC---A-----T---A-AT---TT---------T-T-T----A
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196039567 59 + 196197964 AG-A-G-GAAG--AATGG-CC--AA--CCAC--C--TTA-------AGCACAA-----A----GTTAG----A-aaaa--ctttc---a-----t---a-at---tt---------t-t-t----a
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11449737 59 +  11645122 AG-A-G-GAAG--AATGG-CC--AA--CCAC--C--TTA-------AGCACAA-----A----GTTAG----A-aaaa--ctttc---a-----t---a-at---tt---------t-t-t----a
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   8423 59 -     46448 AG-A-G-GAAG--AATGG-CC--AA--CCAC--C--TTA-------AGCACAA-----A----GTTAG----A-AAAA--CTTTC---A-----T---A-AT---TT---------T-T-T----A
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                6086 59 -     13212 AG-A-G-GAAG--AATGG-CC--AA--CCAC--C--TCA-------AGCACAA-----A----GTTAG----A-AAAA--CTTTC---A-----T---A-AT---TT---------T-T-T----A
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 19766 59 -     55006 AG-A-G-GAAG--AATGG-CC--AA--CCAC--C--TTA-------AGCACAA-----A----GTTAG----A-AAAA--CTTTC---A-----T---A-AT---TT---------T-T-T----A
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43844881 59 +  43892939 AG-A-G-GAAG--AATGG-CC--AA--CCAC--C--TTA-------AGCACAA-----A----GTTAG----A-AAAA--CTTTC---A-----T---A-AT---TT---------T-T-T----A
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               21050 59 -     24607 AG-A-G-GAAG--AATGG-CC--AA--CCAC--C--TTA-------AGCACAA-----A----GTTAG----A-AAAA--CTTTC---A-----T---A-AT---TT---------T-T-T----A
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               8420 59 -     27140 AG-A-G-GAAG--AATGG-CC--AA--CCAC--C--TTA-------AGCACAA-----A----GTTAG----A-AAAA--CTTTC---A-----T---A-AT---TT---------T-T-T----A
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43441456 59 -  43563597 AG-A-G-GAAG--AATGG-CC--AA--CCAC--C--TTA-------AGCACAA-----A----GTTAG----A-AAAA--CTTTC---A-----T---A-AT---TT---------T-T-T----A
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4454260 59 -   4543643 AG-A-G-GAAG--AATGG-CC--AA--CCAC--C--TTA-------AGCACAA-----A----GTTAG----A-AAAA--CTTTC---A-----T---A-AT---TT---------T-T-T----A
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            152038 55 +    252755 -------GAAG--TATGA-CC--AA--TGGC--A--TTG-------AGCATAAA-GTTA--------G----A-Agaa--ctttc---a-----t---a-at---tt---------t-t-t----c
i Manis_javanica.JSZB01003966.1                         I 1 C 0
s Manis_pentadactyla.KN017078.1                             39627 55 +     58827 -------GAAG--TATGA-CC--AA--TGAC--A--TTG-------AGCATAAA-GTTA--------G----A-Agaa--ctttc---a-----t---a-at---tt---------t-t-t----c
i Manis_pentadactyla.KN017078.1                         I 1 C 0
s Marmota_marmota.CZRN01000005.1                         36878069 58 +  64221397 AG-A-A-AAGC--AACAG-CC--AA--CCAC--G--TTA-------AGCATAA-----A----GTTAA----A-AGAA--CATTC---A-----T---A-A----AT---------TTT-T-----
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       65426 58 -    234502 A--G-AGGAAT--TA-GG-CC--AA--GTAC--A--CTG-------ATCAGACA-GTTT--------G----A-AGAA--GTTCC---A-----T---A-GG---TT---------C-T-T----C
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             6191 57 -     87323 G--GAG-GAAC--TACAG-GC--AA--CAAT--A--TTA-------TATACAAA-GTTA--------G----A-AGAA---TTTT---A-----T---A-AT---TG---------T-T-T-----
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 1093 58 +    115071 AA-A-G-GAAA--AGTGG-TC--AA-C-TAT--T--TTA-------AGCACAA-----A----ACTAA----A-AGGA--CTCCC---T-----T---ATA----AT---------T-T-T-----
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1051364 58 -  26018355 AA-G-G-GAAG--AATGG-TC--AA--CAAT--A--Tta-------agcataa-----a----attaa----a-agat--cttCT---G-----T---ATA----AT---------T-T-T-----
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    2258 59 -     12939 A--G-AGGAAG--TATGG-CC--AA--CTAC--A--TTG-------CGCACAC-----A--------GTTAAA-AGAC--ATTTT---G-----T---A-AT---TT---------T-T-T----C
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16514296 56 +  47401472 AG-A-G-GAAA--AATAG-CC--AA--CCAc--a--tta-------aacacat-----a----tttaa----a-a-----ctttc---a-----t---a-a---ttt---------t-t-t----a
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  41295 56 -     48017 T--A-G-GAAG--TCTGG--C-CAA--GTAC--ATACTG-------AGCACAA-----A----CTTAT----A-ATAA--CTTCC---A-----A---A-AT---TC-------------------
i Microgale_talazaci.MicTal_scaffold_34660              C 0 I 4
s Micronycteris_hirsuta.MicHir_scaffold_37978               24775 49 -     32043 -------------------TC--CT--GAAC--T--TTTCTGCCATTTCACAA-----A--------G----TTAGAA--CTCTC---A-----T---A-AT---T----------T-T-T----C
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22824446 58 -  98408828 AA-A-G-GAAG--AATAG-AC--AA--CATT--A--TTA-------AGCACAA-----A----ACTAA----A-AGAA--CTTCC---A-----A---ACA----AT---------T-T-T-----
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8212839 43 +  10048721 -------------------TC--CT--GAAC--G--TTG-------AGCACAA-----A--------G----TTAgaa--ctttc---a-----t---a-at---tt---------t-t-t----t
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            37329 43 +     45743 -------------------TC--CT--GAAC--G--TTG-------AGCACAA-----A--------G----TTAGAA--CTTTC---A-----T---A-AT---TT---------T-T-T----T
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         6002 59 +     29742 AG-A-G-GAAG--AATGG-CC--AA--CCAC--C--TTA-------AGCACAA-----A----GTTAG----A-AAAA--CTTTC---A-----T---A-AT---TT---------T-T-T----A
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        16768 57 -    104932 G--GAG-GAAG--TGTAG-GC--AA--CTAT--A--TTA-------TGGACAAA-TTTA--------G----A-AGAA---TTTT---A-----T---A-AT---TA---------T-T-T-----
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     4976 58 -     12809 AG-A-G-GAAA--AATAG-CC--AA--CCAC--A--GTA-------AACACAT-----A----TTTAA----A-A-----CTTTC---A-----T---G-A-TTTTT---------T-T-T----C
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 150050 57 +    154973 A--G-AGGAAG--TATGG-CC--AA--CTAC--A--TTG-------TGCA--C-----A--------GTTAAA-AGAC--ATTTT---G-----T---A-AT---TT---------T-T-T----C
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                163314 49 +    265003 -------------------TC--CT--GAAC--T--TTTCTGCCATTTCACAA-----A--------G----TTAGAA--TTTTC---A-----T---A-AT---T----------T-T-T----C
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  6053 55 -     19904 A--G-AGGAAG--TATGG-CC--AA--CTAC--A--CTG-------AGCCCTC-----T--------G----G-AGAC--CTTTC---A-----T---A-AT---TT---------T-C-T----C
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  150168 37 -    168139 G--GAG-AAAG--TATAG-GT--AA--CTAT--A--TTA-------CACAAAA-GTTTA-------------------------------------------------------------------
i Mungos_mungo.MunMun_flattened_line_8729               C 0 I 20
s Murina_feae.MurFea_scaffold_2254                          24255 43 -    100666 -------------------TC--CT--GAAC--A--TTG-------AGCACAA-----A--------G----TTAAAA--CTTCC---A-----T---A-AT---TT---------T-T-T----C
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70771684 39 +  92629107 -----------------------------at--a--tta-------agcaCAA-----A----ACTAA----A-AGAA--TTTCC---G-----T---ATA----AT---------T-T-T-----
i Mus_caroli.LT608236.1                                 I 11 C 0
s Mus_musculus.chr16                                     75493738 39 +  98207768 -----------------------------at--a--tta-------agcAGAA-----A----ACTAA----A-AGAA--TTTCC---A-----T---ATA----AT---------T-T-T-----
i Mus_musculus.chr16                                    I 11 C 0
s Mus_pahari.LT608305.1                                  67560495 43 +  89017189 -----------------------ag--ctat--a--tta-------agCACAA-----A----ACTAA----A-AGAA--TTTCC---A-----T---ATA----AT---------T-T-T-----
i Mus_pahari.LT608305.1                                 I 393 C 0
s Mus_spretus.CM004110.1                                 74336464 39 +  97876770 -----------------------------AT--A--TTA-------AGCACAA-----A----ACTAA----A-AGAA--TTTCC---A-----T---ATA----AT---------T-T-T-----
i Mus_spretus.CM004110.1                                I 11 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             14695 50 +     98495 AG-A-G-AAAG--AATGG-CC--AA--CTAC--A--TTG-------AGCAAAA-----T----GTTAA----A-AAAA--AAAAC---T-----T-------------------------------
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 I 6
s Mustela_putorius.JH417978.1                             4428033 54 -  28371801 -----G-GAAC--TATAG-GT--AA--CAAT--A--TTA-------TATACAAA-Gtta--------g----a-aaaa---tttt---a-----t---a-at---tg---------t-t-t-----
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myotis_brandtii.KE161952.1                               971125 43 +   8389877 -------------------TC--CT--GAAC--A--TTG-------AGCACGA-----A--------G----TTAAAA--CTTCC---A-----T---A-AT---TT---------T-T-T----C
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5022546 43 +   6462685 -------------------TC--CT--GAAC--A--TTG-------AGCACGA-----A--------G----TTAAAA--CTTCC---A-----T---A-AT---TT---------T-T-T----C
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3468629 43 -   3747815 -------------------TC--CT--GAAC--A--TTG-------AGCACGA-----A--------G----TTAAAA--CTTCC---A-----T---A-AT---TT---------T-T-T----C
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        13870 43 +     66751 -------------------TC--CT--GAAC--A--TTG-------AGCACGA-----A--------G----TTAAAA--CTTCC---A-----T---A-AT---TT---------T-T-T----C
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             6968 53 -      8794 ----------A--AAGGG-TC--AA--ATAC--C--CTA-------AGTACAA-----A----GTTAG----A-ATAA--CTTCC---A-----T---A-ATT--TT---------T-T-T----T
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        I 379 C 0
s Nannospalax_galili.KL201303.1                            120199 58 +    362372 AG-A-G-GAAG--GATGG-TC--AA--CTAT--A--TTA-------AGCACAA-----A----GTTAA----A-ATAA--CTTCC---A-----T---ATC----AT---------T-T-T-----
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4490166 57 -  14209539 G--GAG-GAAG--TGTAG-GC--AA--CTAT--A--TTA-------TGGACAAA-TTTA--------g----a-agaa---tttt---a-----t---a-at---ta---------t-t-t-----
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3954641 57 -   4490290 A--G-AGGAAG--TATGG-CC--AA--CTAC--A--TTG-------TGCA--C-----A--------GTTAAA-agac--atttt---g-----t---a-at---tt---------t-t-t----c
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  50402 43 +     94413 -------------------TC--CT--AAAC--A--CTG-------AGCACAA-----A--------G----TTAGAA--CTTTC---A-----T---A-GT---TT---------T-T-T----C
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1817463                            691 59 -      1070 AG-A-G-GAAG--AATGG-CC--AA--CTAC--C--TTA-------AGCACAA-----A----GTTAG----A-AAAA--CTTTC---A-----T---A-AT---TT---------T-T-T----A
i Nomascus_annamensis.k141_1817463                      I 69 C 0
s Nomascus_concolor.k141_226614                              4963 59 -      5092 AG-A-G-GAAG--AATGG-CC--AA--CTAC--C--TTA-------AGCACAA-----A----GTTAG----A-AAAA--CTTTC---A-----T---A-AT---TT---------T-T-T----A
i Nomascus_concolor.k141_226614                         I 172 I 10
s Nomascus_gabriellae.k141_1400361                            621 59 -      2203 AG-A-G-GAAG--AATGG-AC--AA--CTAC--C--TTA-------AGCACAA-----A----GTTAG----A-AAAA--CTTTC---A-----T---A-AT---TT---------T-T-T----A
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_1022                             645 59 -     11638 AG-A-G-GAAG--AATGG-CC--AA--CTAC--C--TTA-------AGCACAA-----A----GTTAG----A-AAAA--CTTTC---A-----T---A-AT---TT---------T-T-T----A
i Nomascus_siki_b.tarseq_1022                       C 0 C 0
s Nomascus_siki_a.k141_421408                                   535 59 +     16235 AG-A-A-GAAG--AATGG-CC--AA--ATAC--C--TTA-------AGCACAA-----A----GTTAG----A-AAAA--CTTTC---A-----T---A-AT---TT---------T-T-T----A
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                37919 31 +   3668941 -----------------------------------------------ACACAAA-GTTA--------g----a-agaa---tttt---a-----t---a-at---ta---------t-t-t-----
i Nyctereutes_procyonoides.CAJHUB010000786.1            I 13 C 0
s Nycticebus_bengalensis.LG16                            65571662 55 -  95554990 AG-A-G-GAAA--AATAG-CC--AA--ATAC--A--TTA-------AGCACAA-----A----TTT-A----A-A-----CTTTT---A-----T---A-AT---TT---------T-T-T----C
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_771591                            15071 55 +     16181 AG-A-G-GAAA--AATAG-CC--AA--ATAC--A--TTA-------AGCACAA-----A----TTT-A----A-A-----CTTTT---A-----T---A-AT---TT---------T-T-T----C
i Nycticebus_coucang.k141_771591                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65679858 55 +  89412551 AG-A-G-GAAA--AATAG-CC--AA--ATAC--A--TTA-------AGCACAA-----A----TTT-A----A-A-----CTTTT---A-----T---A-AT---TT---------T-T-T----C
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Odobenus_rosmarus.KB229369.1                             684869 57 -   3126709 G--GAG-GAAA--TATAG-GC--AA--CTAT--A--TTA-------TGGACAAA-GTTA--------g----a-agaa---tttt---a-----t---a-at---ta---------t-t-t-----
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1083485 55 +   1425656 A--G-AGGAAG--TATGG-CC--AA--CTGC--A--CTG-------AGCACTC-----T--------G----A-AGAC--CTTTC---A-----T---A-AT---TT---------T-C-T----C
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         41568 55 +     78940 A--G-AGGAAG--TATGG-CC--AA--CTAC--A--CTG-------AGCACTC-----C--------G----A-AGAC--CTTTC---A-----T---A-AT---TT---------T-C-T----C
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  130242 58 +    145789 AA-A-G-GAAG--AATGG-AC--AA--CATT--A--TTA-------AGCACAA-----A----ACTAA----A-AGAA--CTTCC---A-----T---ATA----AT---------T-T-T-----
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  42935 58 +     62360 AA-A-G-AAAG--AATGG-CC--AA--CAAT--A--TTA-------AGCACAA-----A----ACCAA----A-AGAA--CTTCT---A-----C---ATA----AT---------T-T-T-----
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7228317 56 -   7562323 A--G-AGGAAG--TATGG-CC--AA--TTAC--A--TTG-------TGCA--C-----A--------GTTA-A-agac--atttt---g-----t---a-at---tt---------t-t-t----c
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              64095 59 -     66828 AA-T-G-AGAG--GATGG--C--AA--ATAC--A--TTG-------AGCACAA-----A----TTTAG----A-ATAA--TTTTC---A-----T---A-AT---TT---------T-T-T---TC
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141883707 58 + 163896628 AG-A-G-GAAG---ATGG-TT--AA--CTAC--A--TTA-------AACCCAA-----A----GTTAA--A-A-Agat--ctttc---a-----t---a-a----tt---------t-t-t----t
i Oryctolagus_cuniculus.CM000803.1                      C 0 I 3
s Otocyon_megalotis.JAEUCK010005121.1                      315057 31 -    505867 -----------------------------------------------ACACAAA-GTTA--------g----a-agaa---tttt---a-----t---a-at---ta---------t-t-t-----
i Otocyon_megalotis.JAEUCK010005121.1                   I 13 C 0
s Otolemur_crassicaudatus.k141_505435                        5011 55 -     53940 AG-A-G-GAAA--AATAG-CC--AA--AAAT--G--TTA-------GGCGCAA-----A----TTT-A----A-A-----CTTTT---A-----C---A-AT---TT---------T-T-T----C
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18012984 55 -  38779656 AG-A-G-GAAA--AATAG-CC--AA--AACT--G--TTA-------GGCGCAA-----A----TTT-a----a-a-----ctttt---a-----c---a-at---tt---------t-t-t----c
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134082490 55 - 275406953 A--G-AGGAAG--TATGG-GC--AA--CTAC--A--CTG-------AGCACTC-----T--------G----A-AGAC--CTTTC---A-----T---A-AT---TT---------T-C-T----C
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      83725 55 +    140051 A--G-AGTAAG--TATGG-GC--AA--CTAT--A--CTG-------AGCACTC-----T--------G----A-AGAC--TTTTC---A-----T---A-AT---TT---------T-C-T----C
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127578378 39 - 205426864 ------------------------------C--C--TTA-------AGCACAA-----A----GTTAG----A-Aaaa--ctttc---a-----t---a-at---tt---------t-t-t----a
i Pan_paniscus.CM003386.1                               I 13 C 0
s Pan_troglodytes.KZ622857.1                               333148 59 +    772158 AG-A-C-GAAG--AATGG-CC--AA--CTAC--C--TTA-------AGCACAA-----A----GTTAG----A-Aaaa--ctttc---a-----t---a-at---tt---------t-t-t----a
i Pan_troglodytes.KZ622857.1                            I 150 I 115
s Panthera_onca.PanOnc_flattened_line_1615                  39768 58 +    295523 G--GAG-GAAG--TACAG-GC--AA--CTAT--A--CTA-------CACAAAA-GTTTA--------G----A-AGAA--CTTTT---A-----T---A-AT---TA---------T-T-T-----
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3643583 58 +  18214204 G--GAG-GAAG--TACAG-GC--AA--CTAT--A--CTA-------CACAAAA-GTTTA--------G----A-Agaa--ctttt---a-----t---a-at---ta---------t-t-t-----
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5033231 58 -   6340057 G--GAG-GAAG--TACAG-GC--AA--CTAT--A--CTA-------CACAAAA-GTTTA--------G----A-Agaa--ctttt---a-----t---a-at---ta---------t-t-t-----
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1071366 55 -   1292953 A--G-AGGAAG--TATGG-GC--AA--CTAC--A--CTG-------AGCACTC-----T--------G----A-AGAC--CTTTC---A-----T---A-AT---TT---------T-C-T----C
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188160245 59 - 188283584 AG-A-G-GAAG--AATGG-CC--AA--CCAC--C--TTA-------AGCACAA-----A----GTTAG----A-Aaaa--ctttc---a-----t---a-at---tt---------t-t-t----a
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              3335 59 +     25005 AG-A-G-GAAG--AATGG-CC--AA--CCAC--C--TTA-------AGCATAA-----A----GTTAG----A-AAAA--CTTTC---A-----T---A-AT---TT---------T-T-T----A
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47517617 59 +  47705337 AG-A-G-GAAG--AATGG-CC--AA--CCAC--C--TTA-------AGCACAA-----A----GTTAG----A-AAAA--CTTTC---A-----T---A-AT---TT---------T-T-T----A
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 71608 59 -    104429 AG-A-G-GAAG--AATGG-CC--AA--CCAC--C--TTA-------AGCATAA-----A----GTTAG----A-AAAA--CTTTC---A-----T---A-AT---TT---------T-T-T----A
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   10140 59 +     14967 AG-A-G-GAAG--AATGG-CC--AA--CCAC--C--TTA-------AGCACAA-----A----GTTAG----A-AAAA--CTTTC---A-----T---A-AT---TT---------T-T-T----A
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 6005 59 -      7628 AG-A-G-GAAG--AATGG-CC--AA--CCAC--C--TTA-------AGCACAA-----A----GTTAG----A-AAAA--CTTTC---A-----T---A-AT---TT---------T-T-T----A
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    121269 58 -    135482 G--GAG-GAAG--TATCA-GC--AA--CTAT--A--TTA-------CACAAAA-GTTTA--------G----A-AGAA--CTTTT---A-----T---A-AT---TA---------T-T-T-----
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          10684 55 -     23713 AG-A-A-GAAA--ATTAG-CC--AA--ATAT--G--TTA-------AGCGCAA-----A----TTT-A----A-A-----CTTTT---A-----T---A-AT---TT---------T-T-T----C
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           11824 55 +     61070 AG-A-A-GAAA--ATTAG-CC--AA--ATAT--G--TTA-------AGCGCAA-----A----TTT-A----A-A-----CTTTT---A-----T---A-AT---TT---------T-T-T----C
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       2106 53 +     49596 -------GAAT--AATTG-CC--AA--CTAC--A--TTT-------AGCACAA-----A----GCTAG----A-AGAA--TTTTC---A-----A---A-A----TT---------T-T-T-----
i Perognathus_longimembris.PerPac_flattened_line_19359  I 1 C 0
s Peromyscus_maniculatus.KI615518.1                       4955298 58 -   8017169 AA-A-G-GAAG--AATGG-CC--AA--CAAT--A--TTA-------AGcacaa-----a----accaa----a-agaa--cttCT---A-----T---ATA----AT---------T-T-T-----
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    17158 47 -     36578 GG-A-G-AAAC--AATAG-CC--C----TCT--A--GTC-------AGTACAA-----A----GTTAA----A-ATAA--CATTC---A-------------------------------------
i Petromus_typicus.PetTyp_scaffold_33007                C 0 I 6
s Phocoena_phocoena.PhoPho_flattened_line_53071              2782 57 +      8220 A--G-AGGAAG--TATGG-CC--AA--CTAC--A--TTG-------TGCA--C-----A--------GTTAAA-AGAC--ATTTT---G-----T---A-AT---TT---------T-T-T----C
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            99415 44 +    112873 -------------------TC--CT--AAAC--A--TTG-------AGCACAA-----A--------G----TTAAAA--CTTCC---A-----T---A-AT---TTT--------T-T-T----C
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           9253 57 +     21690 A--G-AGGAAG--TATGG-CC--AA--CTAC--A--TTG-------CGCAGAC-----A--------GTTAAA-AGAC--AT-TT---G-----T---A-AT---T----------T-T-T----C
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       25940 59 +     44506 AG-A-G-GAAG--AATGG-CC--AA--CTAC--C--TTA-------AACACAA-----A----GCTAG----A-AAAA--TTTTT---A-----T---A-AT---TT---------T-T-T----A
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        26153 59 +     67491 AG-A-G-GAAG--AATGG-CC--AA--CTAC--C--TTA-------AACACAA-----A----GCTAG----A-AAAA--TTTTT---A-----T---A-AT---TT---------T-T-T----A
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      16392 59 -     98129 AG-A-G-GAAG--AATGG-CC--AA--CTAC--C--TTA-------AACACAA-----A----GCTAG----A-AAAA--TTTTT---A-----T---A-AT---TT---------T-T-T----A
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     25993 59 +    147771 AG-A-G-GAAG--AATGG-CC--AA--CTAC--C--TTA-------AACACAA-----A----GCTAG----A-AAAA--TTTTT---A-----T---A-AT---TT---------T-T-T----A
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         2628 59 -     43940 AG-A-G-GAAG--AATGG-CC--AA--CTAC--C--TTA-------AACACAA-----A----GCTAG----A-AAAA--TTTTT---A-----T---A-AT---TT---------T-T-T----A
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          6711 59 -     55515 AG-A-G-GAAG--AATGG-CC--AA--CTAC--C--TTA-------AACACAA-----A----GCTAG----A-AAAA--TTTTT---A-----T---A-AT---TT---------T-T-T----A
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         26065 59 +    152463 AG-A-G-GAAG--AATGG-CC--AA--CTAC--C--TTA-------AACACAA-----A----GCTAG----A-AAAA--TTTTT---A-----T---A-AT---TT---------T-T-T----A
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       3873 59 -    119457 AG-A-G-GAAG--AATGG-CC--AA--CTAC--C--TTA-------AACACAA-----A----GCTAG----A-AAAA--TTTTT---A-----T---A-AT---TT---------T-T-T----A
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         15788 59 +    134592 AG-A-G-GAAG--AATGG-CC--AA--CTAC--C--TTA-------AACACAA-----A----GCTAG----A-AAAA--TTTTT---A-----T---A-AT---TT---------T-T-T----A
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          26375 59 -     75465 AG-A-G-GAAG--AATGG-CC--AA--CTAC--C--TTA-------AACACAA-----A----GCTAG----A-AAAA--TTTTT---A-----T---A-AT---TT---------T-T-T----A
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              190988 59 -    373494 AG-A-G-GAAG--AATGG-CC--AA--CTGC--C--TTA-------AGCATAA-----A----GTTAG----A-Aaaa--ctttc---a-----t---a-at---tt---------t-t-t----a
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19811635 59 +  19899266 AG-A-G-GAAG--AATGG-CC--AA--CTAC--C--TTA-------AGCATAA-----A----GTTAG----A-AAAA--CTTTC---A-----T---A-AT---TT---------T-T-T----A
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                3806 58 -      9567 --------AAG--TATGG-AC--AAATACAA--A--CTG-------AGCACAA-----A----TTTAA----A-ATAA--CTTCC---A-----T---A-AT---TTT--------T-T-T---TC
i Procavia_capensis.ProCapCap_scaffold_149274           I 2 C 0
s Prolemur_simus.MPIZ01000048.1                           6852606 55 +  12164890 AG-A-G-GAAA--ACTAA-CC--AA--CTAC--A--TTA-------AGcacat-----a----tttaa----a-a-----ctttt---a-----t---a-at---tt---------t-t-c-----
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coronatus.k141_1353159                         7691 56 +     11805 GG-A-G-GAAA--AATAG-CC--AA--CTAT--A--TTA-------AGCACAA-----A----TTTAA----A-A-----ATTTT---A-----T---A-A-T--TT---------T-T-T----C
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           47026 56 +     52369 AG-A-G-GAAA--AATAG-CC--AA--CTAC--A--TTA-------AGCACAT-----A----TTTAA----A-A-----CTTTT---A-----T---A-A-T--TT---------T-T-T----C
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         39413 56 -     44753 AG-A-G-GAAA--AATAG-CC--AA--CTAC--A--TTA-------AGCACAC-----A----TTTAA----A-A-----CTTTT---A-----T---A-A-T--TT---------T-T-T----C
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            21336 56 +     27322 AG-A-G-GAAA--AATAG-CC--AA--CTAC--A--TTA-------AGCACAC-----A----TTTAA----A-A-----CTTTT---A-----T---A-A-T--TT---------T-T-T----C
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       20984 56 -     53241 AG-A-G-GAAA--AATAG-CC--AA--CTAT--A--TTA-------AGCACAA-----A----TTTAA----A-A-----ATTTT---A-----T---A-A-T--TT---------T-T-T----C
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         43247 56 -     48185 AG-A-G-GAAA--AATAG-CC--AA--CTAT--A--TTA-------AGCACAA-----A----TTTAA----A-A-----ATTTT---A-----T---A-A-T--TT---------T-T-T----C
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           38088 58 +     77221 AA-A-G-GAAA--AGTGG-TC--AA-C-TAT--T--TTA-------AGCACAA-----A----ACTAA----A-ACGA--CTCCT---T-----T---GTA----AT---------T-T-T-----
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            5957 50 -     27784 -------------------TC--CT--GAAT--T--TTTCTGCCATTTCACAA-----A--------G----TTAGAA--CTTTT---G-----C---A-AT---T-T--------T-T-T----C
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        250160 57 -    344369 G--GAG-GAAC--TATAA-GC--AA--CAAT--A--TTA-------TACACAAA-GTTA--------G----A-AGAA---TTTT---A-----T---A-AT---CT---------T-T-T-----
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Puma_concolor.QAVW01000427.1                          131539879 58 - 161321710 G--GAG-GAAG--TACAG-GC--AA--CTAT--A--CTA-------CACAAAA-GTTTA--------G----A-Agaa--ctttt---a-----t---a-at---ta---------t-t-t-----
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                20349 55 +     68503 A--G-AGGAAG--TATGG-CC--AA--CTAC--A--CTG-------AGCACTC-----T--------G----A-AGAC--CTTTC---A-----T---A-AT---TT---------T-C-T----C
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13917502 51 +  90463843 GA-A-G-GAAA--AATTG-TC--AA--CTGT--A--TTA-------CACACAA-----A----ACTAA----A-AGAA--CTTGC---A-----T---T---------------------------
i Rattus_norvegicus.chr11                               C 0 I 6
s Rhinolophus_sinicus.LVEH01000179.1                      1792461 59 +   2252614 A--G-AGGAAT--TACGA-CC--AA--GTAC--A--TTG-------ATCGCAAA-TTTA--------G----A-AGAA--TTTAC---A-----G---A-AG---TT---------T-T-T----C
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                       759 55 -      4338 A--G-AGGAAG--TATGA-CC--GA--CTAC--A--CTG-------AGCACTC-----T--------G----A-AGAC--CTTTC---A-----T---A-AT---TT---------T-C-T----C
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15676397 59 -  43202129 AG-A-G-GAAG--AACGA-CC--AA--CTAC--C--TTA-------AGCACAA-----A----Gttag----a-taaa--ttttt---a-----t---a-at---tt---------t-t-a----a
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        8310 59 +     34089 AG-A-G-GAAG--AACGA-CC--AA--CTAC--C--TTA-------AGCACAA-----A----GTTAG----A-TAAA--TTTTT---A-----T---A-AT---TT---------T-T-A----A
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              8250 59 -     60842 AG-A-G-GAAG--AACGA-CC--AA--CTAC--C--TTA-------AGCACAA-----A----GTTAG----A-TAAA--TTTTT---A-----T---A-AT---TT---------T-T-A----A
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              8344 59 +     67014 AG-A-G-GAAG--AACGA-CC--AA--CTAC--C--TTA-------AGCACAA-----A----GTTAG----A-TAAA--TTTTT---A-----T---A-AT---TT---------T-T-A----A
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              8321 59 +     60816 AG-A-G-GAAG--AACGA-CC--AA--CTAC--C--TTA-------AGCACAA-----A----GTTAG----A-TAAA--TTTTT---A-----T---A-AT---TT---------T-T-A----A
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 8258 59 -     76454 AG-A-G-GAAG--AATGA-CC--AA--CTAC--C--TTA-------AGCACAA-----A----GTTAG----A-TAAA--TTTTT---A-----T---A-AT---TT---------T-T-A----A
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17345045 59 -  30362882 AG-A-G-GAAG--AATGG-CC--AA--CTAC--C--TTA-------AGCACAA-----A----GTTAG----A-AAAA--TTTTT---A-----T---A-AT---TT---------T-T-T----A
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         24366 59 -     62485 AG-A-G-GAAG--AATGG-CC--AA--CTAC--C--TTA-------AGCACAA-----A----GTTAG----A-AAAA--TTTTT---A-----T---A-AT---TT---------T-T-T----A
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   39491 50 -    114521 -----A--AAG--CATGG-TC--AA--CCAC--A--TT--------CTTACAA-----AGTGAG--------A-AGAA--TTTTC---A-----T---A-ACT---T-------------------
i Scalopus_aquaticus.ScaAqu_scaffold_9300               I 1 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  104863 62 -    120886 AA-A-A-GAAG--AA-GA-AC--AA--CAAT--A--TTA-------AGAATAA-----A----ACTAG----A-AGAA--CTTCT---ATGTAAT---ATA----AT---------T-T-T-----
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Sorex_araneus.JH798170.1                               17769890 26 -  27805282 --------------------------------------------------------------------------------tgaGTTAAa-----c---a-at---at--ttccaatt-t-t----t
i Sorex_araneus.JH798170.1                              I 20 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            23414 38 +    739146 AG-A-G-TAAG--TAGGG-TC--AT--CTAC--A--CTG-------AACACAA-----A----GTTAG----------------------------------------------------------
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 I 11
s Spermophilus_dauricus.KZ294190.1                        2243905 58 +   2842873 AG-A-A-AAGC--AACAG-CC--AA--CCAC--G--TTA-------AGCATAA-----A----GTTAA----A-Agaa--cattc---a-----t---t-a----at---------ttt-t-----
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             238677 57 -    276980 G--GGG-GAAC--TATAG-GC--AA--TTAC--A--TTA-------TATACAAA-GTTA--------G----A-AGAA---TTTT---A-----T---A-AT---TG---------T-T-T-----
i Spilogale_gracilis.SpiGra_flattened_line_905          I 6 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            33084 58 +     62062 G--GAG-AAAG--TATAG-GT--AA--CTAT--A--TTA-------CACAAAA-GTTTA--------G----A-AGAA--CTTTT---A-----T---A-AT---TA---------T-T-T-----
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189274858 55 + 218635234 A--G-TAGAGC--TAAGT-CC--AA--CTAC--A--TTG-------ATCACAC-----A--------G----A-Agac--ttttc---a-----t---g-at---tt---------t-t-t----c
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        18658 59 -  13920577 AG-A-G-GAAG--AATGG-CC--AA--CTAC--C--TTA-------AGCACAA-----A----GTTAG----A-AAAA--CTTTC---A-----T---A-AT---TT---------T-T-T----A
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                2190 43 +     20549 -------------------TC--CT--GAAC--A--TTG-------AGCACAA-----A--------G----TTAGAA--CTTCC---A-----T---A-AT---TT---------T-T-T----C
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               16638 55 +     45698 ----------a--aaggg-tc--aa--ATAC--C--CTA-------AGTACAA-----A----GTTAG----A-ATAA--CTTCC---A-----T---A-ATATTTT---------T-T-T----A
i Tamandua_tetradactyla.TamTet_scaffold_26877           I 379 C 0
s Tapirus_indicus.TapInd_scaffold_176                      810644 58 +   1148477 A-GA-G-GAAG--TATGG-CC--AA--CTAC--A--TTG-------AGCACAAA-GTTA--------G----A-AAAA--CTTTC---A-----T---A-AT---T----------T-T-T----C
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  61286 58 +     99546 A-GA-G-GAAG--TATGG-CC--AA--CTAC--A--TTG-------AGCACAAA-GTTA--------G----A-AAAA--CTTTC---A-----T---A-AT---T----------T-T-T----C
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               31234 53 +     42269 ---------AG--AATGG-CC--AA--CTAC--A--TTA-------AGCACAA-----A----GTTAG----A-AAAA--GTTTC---A-----T---A-AT---TT---------T-T-T----C
i Tarsius_lariang.k141_609102                           I 3 C 0
s Tarsius_wallacei.k141_48636                               64543 53 +     65473 ---------AG--AATGG-CC--AA--CTAC--A--TTA-------AGCACAA-----A----GTTAG----A-AAAA--GTTTC---A-----T---A-AT---TT---------T-T-T----C
i Tarsius_wallacei.k141_48636                           I 3 C 0
s Theropithecus_gelada.CM009951.1                       194011778 59 - 194193292 AG-A-G-GAAG--AATGG-CC--AA--CCAC--C--TTA-------AGCATAA-----A----GTTAG----A-Aaaa--ctttc---a-----t---a-at---tt---------t-t-t----a
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                   344 38 -      3104 ---------AA--TAGGA-TC--AA--ATAC--C--CAA-------AGCACAA-----A--------G----A-ATAA--CTTTC-----------------------------------------
i Tolypeutes_matacus.TolMat_scaffold_475685             N 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  137955 50 -    259118 -------------------TC--TT--GAAC--T--TTTCTGCCATTTCACAA-----T--------G----TTAGAA--CTTTC---A-----T---A-AT---T-T--------T-T-T----C
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   9386 55 +     90398 A--A-AGGAAA--TATGG-CC--AA--CTAC--A--TTA-------GGCACAC-----A--------G----A-AGAT--CTTTC---A-----T---A-AT---TT---------T-C-T----C
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16089697 66 +  31416278 AG-A-G-GAAG--TATGG-CC--AAATATAC--A--TAG-------AGCAGAA-----A----TTTAG----A-ATaa--ctttc---a-----t---a-at---tt-----t---t-t-tcagtC
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2797611 55 -   3938065 aa-a-g-gGAG--AATGG-TC--AA--CTAC--A--TTA-------AGTACAA-----A----CTAAG----A-Agaa--ctttt---c-----t---g-at---tt-------------------
i Tupaia_chinensis.KB320831.1                           C 0 I 2
s Tupaia_tana.TupTan_flattened_line_68454                    9540 55 +     13056 AA-A-G-GGAG--AATGG-TC--AA--CTAC--A--TTA-------AGGACAA-----A----CTTAG----A-AGAA--CTTTT---C-----T---G-AT---TT-------------------
i Tupaia_tana.TupTan_flattened_line_68454               C 0 I 2
s Tursiops_truncatus.MRVK01000923.1                      69317046 56 -  96451834 A--G-AGGAAG--TATGG-CC--AA--TTAC--A--TTG-------TGCA--C-----A--------GTTA-A-agac--atttt---g-----t---a-at---tt---------t-t-t----c
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_93707                   4889 24 +      5103 ----------------------------------------------------------A----G--------A-GGAA--TTTTC---A-----T---T-TTT--TT---------T-T-T----C
i Uropsilus_gracilis.UroGra_scaffold_93707              N 0 N 0
s Ursus_maritimus.KK498671.1                              6520334 57 +  28682327 G--GAG-GAAG--TACAG-GC--AA--CTAT--A--TTA-------CACACAAA-GTTA--------G----A-GGaa---tctt---a-----t---a-at---ta---------t-t-t-----
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  9248 56 -     20643 AG-A-G-GAAA--ACTAA-CC--AA--CTAC--A--TTA-------AGCACAT-----A----TTTAA----A-A-----CTTTT---A-----T---A-AT---TT---------T-T-T----C
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             28783 56 -     33872 AG-A-G-GAAA--ACTAA-CC--AA--CTAC--A--TTA-------AGCACAT-----A----TTTAA----A-A-----CTTTT---A-----T---A-AT---TT---------T-T-T----C
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1528080 59 -   2331223 A--A-TGGAAG--TATGG-CC--AG--CTAC--A--CTG-------AACACAC-----AGTTA----G----A-AGAC--CTTTC---A-----T---A-AT---TT---------T-G-T----T
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                144284 31 -    281493 -----------------------------------------------ACACAAA-GTTA--------G----A-AGAA---TTTT---A-----T---A-AT---TA---------T-T-T-----
i Vulpes_lagopus.VulLag_flattened_line_2045             I 13 C 0
s Xerus_inauris.XerIna_scaffold_7898                       131407 54 -    134049 AG-A-A-AGAG--AATGG-CT--AA--CTAC--A--TTA-------AGCACAA-----G--------A----A-CAGA--CATTC---T-----G---A-A----GA---------TGT-A-----
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        219725 57 -    227762 G--GAG-GAAA--TATAG-GC--AA--CTAT--A--TTA-------TGGACAAA-GTTA--------G----A-AGAA---TTTT---A-----T---A-AT---TA---------T-T-T-----
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_256618                      339 53 -      2259 --------AAA--AATTG-TC--AA--CTAT--G--TGA-------TGCAGAA-----A----GTTAA----A-AGAG--CTTTC---A-----T---AAA----AC---------T-T-T-----
i Zapus_hudsonius.ZapHud_scaffold_256618                C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            1790 59 -     13665 A--G-AGGAAG--TATGG-CC--AA--CTAC--A--TTG-------CGCACAC-----A--------GTTAAA-AGAC--ATTTT---G-----T---A-AT---TT---------T-T-T----C
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Ochotona_princeps.JH802095.1                            4999348 675 -  23139505 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Elephantulus_edwardii.JH947210.1                        7830035 1277 +  15467074 I
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Echinops_telfairi.JH980316.1                           22999931  2 -  44670279 I
e Trachypithecus_pileatus.k141_1022309                       5226  0 +     13828 C
e Trachypithecus_phayrei.ctg3                            44662914  0 -  44834318 C
e Trachypithecus_obscurus.k141_1115109                       8130  0 -     28054 C
e Trachypithecus_melamera.k141_699241                        2986  0 -     24393 C
e Trachypithecus_leucocephalus.k141_381681                   3005  0 +     12481 C
e Trachypithecus_laotum.k141_760702                          4719  0 +     14371 C
e Trachypithecus_hatinhensis.k141_504423                     6067  0 -     15592 C
e Trachypithecus_germaini.k141_868450                        3883  0 -     11566 C
e Trachypithecus_geei.k141_670367                           46082  0 -     54611 C
e Trachypithecus_francoisi.k141_768164                       4689  0 -     14244 C
e Trachypithecus_cristatus.k141_1011511                      5261  0 -     12939 C
e Trachypithecus_crepusculus.k141_1588528                   23360  0 -     32910 C
e Trachypithecus_auratus.k141_738098                        29800  0 +     38948 C
e Semnopithecus_vetulus.k141_1143185                        16479  0 +     30600 C
e Semnopithecus_schistaceus.k141_387461                     33457  0 +     42640 C
e Semnopithecus_priam.k141_410937                           40312  0 +     46263 C
e Semnopithecus_johnii.k141_785014                         121532  0 +    130994 C
e Semnopithecus_hypoleucos.k141_761524                      11528  0 +     20762 C
e Semnopithecus_entellus.k141_1572367                        6153  0 +     15331 C
e Rhinopithecus_strykeri.ctg4                            44859307  0 -  45163003 C
e Rhinopithecus_bieti.k119_554384                            2917  0 -     17045 C
e Pygathrix_nigripes_a.k141_101123                             8537  0 +     18040 C
e Pygathrix_nigripes_b.ctg79                                 6809148  0 +   6970761 C
e Pygathrix_cinerea.k141_374971                             32651  0 +     56732 C
e Propithecus_coquerelli.NW_012147863.1                     21633  0 -     30946 C
e Presbytis_mitrata.k141_860013                              8661  0 +     14865 C
e Presbytis_comata.k141_672698                               8546  0 -     15069 C
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000036.1               26743271  0 +  26888534 C
e Piliocolobus_kirkii.k141_929665                            4788  0 +      7694 C
e Piliocolobus_gordonorum.k141_1270531                       5421  0 -     17985 C
e Piliocolobus_badius.k141_1987485                           4802  0 -      5908 C
e Octodon_degus.JH651621.1                                3687420 1881 +  10294119 I
e Nasalis_larvatus.k141_153429                              11264  0 +     48152 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     91920 1922 -    117718 I
e Hystrix_cristata.HysCri_scaffold_50788                     7688 1865 +     22540 I
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 32592 1717 -     67205 I
e Colobus_polykomos.k141_1406057                            19335  0 +     23629 C
e Colobus_guereza.LG08                                  147667351  0 + 156195979 C
e Colobus_angolensis.KN985967.1                          10889423  0 +  10971483 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               17440  5 +    209709 AGT-T-----G
s Acinonyx_jubatus.LLWD01000356.1                         2039412  4 +   3721120 -gc-t-----g
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    117658  5 -    189883 AGG-T-----G
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10663097  4 +  23371972 -gt-t-----g
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7099894  4 -  16596857 -gt-t-----g
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   21616  5 -     22067 AGT-T-----G
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   5313  5 -     60446 AGT-T-----G
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         6030  5 -     29318 AGT-T-----G
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         4968  5 +     38766 AGT-T-----G
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          5924  5 -     80423 AGT-T-----G
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                               896  5 +     19852 AGT-T-----A
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                3152  5 -     12443 AGT-T-----A
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                              451  5 +      5070 AGT-T-----A
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                  196  5 -      1641 AGT-T-----A
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          2935  5 -     24210 AGT-T-----A
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           29517  5 -     30219 AGT-T-----A
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_405616                              5353  5 +     16794 AGT-T-----A
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                             485  5 -      1470 AGT-T-----A
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             4630  5 -      9835 AGT-T-----A
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3525412  5 +   4113121 AGT-T-----G
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      392444  5 -    631301 AGT-T-----G
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             2843  5 +     55446 AGT-T-----G
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 66243  5 +     78111 TGT-T-----G
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            9189  5 +     22701 AGT-T-----G
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5753147  5 +   9889416 tgT-T-----G
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             9745  5 -    104377 TGT-T-----G
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               9752  5 +     23246 TGT-T-----G
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     2282  5 +     11424 AGG-T-----G
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        6365  5 +      9265 AGT-T-----A
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                10869  5 -     29036 AGT-T-----G
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9543039  5 +  39197703 AGT-T-----A
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             64312  5 +     85812 AGT-T-----A
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                15325  5 +     89302 AGT-T-----A
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             19826  5 -     58268 AGT-T-----A
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             67820  5 +    119057 AGT-T-----A
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               9789  5 -     25888 AGT-T-----A
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                10840  5 -     16375 AAT-T-----A
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               4456  5 +      6337 AAT-T-----A
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26383891  5 +  51448160 agt-T-----G
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        9064  5 -     13118 agt-T-----G
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   47874  5 -     72089 AGT-T-----G
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   302018  5 -   6870073 AGT-t-----g
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22956116  5 + 161108492 AGT-t-----g
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     418381  5 +    998990 AGT-t-----g
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22664770  5 + 158972876 AGT-t-----g
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               674533  5 +   1914593 AGT-t-----g
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               117692  5 -    171031 AGT-T-----G
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 16712  5 +    125063 AGT-T-----G
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                18759  5 -    216513 AGT-T-----G
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       11302  5 -    134917 AGT-T-----G
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3223029  5 -   8989139 agt-t-----g
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           400731  5 -  15254737 agt-t-----g
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2976467  5 +   6889770 agt-t-----g
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11526235  4 +  39901454 -GT-T-----G
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   21209  4 +     87036 -GT-T-----G
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11272918  4 -  35597290 -gt-t-----g
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11095629  4 +  39895921 -gt-t-----g
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16462414  4 -  44759192 -gt-t-----g
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21330492  5 + 157394656 AGt-t-----g
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135711709  5 - 157403528 AGT-t-----g
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          313430  5 +    345090 AGT-T-----G
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               61651  5 +     67245 AGT-T-----G
i Carollia_perspicillata.CarPer_scaffold_4436           I 9 C 0
s Castor_canadensis.CasCan_scaffold_417865                     75  5 -       402 AGT-T-----G
i Castor_canadensis.CasCan_scaffold_417865              C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   162555  5 -    276539 AGT-T-----G
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15789563  5 -  24422027 AAT-T-----A
i Cavia_aperea.AVPZ01000278.1                           I 6 C 0
s Cavia_porcellus.DS562889.1                             15801502  5 -  24440124 AAT-T-----A
i Cavia_porcellus.DS562889.1                            I 6 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       179674  5 +    436027 AAT-T-----A
i Cavia_tschudii.CavTsc_scaffold_488                    I 6 C 0
s Cebus_albifrons.Contig22                               18894523  5 -  29618158 ATC-T-----A
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                12067  5 -     26817 ATC-T-----A
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                16311  5 +     25043 ATC-T-----A
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                        12445  5 +     21754 AGT-T-----G
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4367466  5 +   7569818 agc-C-----G
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         7223  5 -      9338 AGC-C-----G
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6559254  5 +   6739814 agt-t-----g
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      30731  5 +     60454 AGT-T-----G
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          5935  5 -     21101 AGT-T-----G
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         63245  5 -    107033 AGT-T-----G
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        6108  5 -     17608 AGT-T-----G
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          3273  5 +     45019 AGT-T-----G
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           3333  5 +     15177 AGT-T-----G
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          6155  5 +     16677 AGT-T-----G
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           28345  5 +     35983 AGT-T-----G
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11994876  5 +  12117833 AGT-T-----G
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46481637  5 +  46592721 AGT-T-----G
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      45186  5 -     45581 AGT-T-----G
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       6169  5 +     35577 AGT-T-----G
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        5963  5 -     25661 AGT-T-----G
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        5920  5 -     17744 AGT-T-----G
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        25504  5 +     37128 AGT-T-----G
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           63065  5 -     68416 AAT-T-----A
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                           12171  5 +     13308 AAT-T-----A
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             9350  5 -     18223 AGT-T-----G
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              1089  5 +    188999 AGT-T-----G
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           45387  5 +     57117 AGT-T-----G
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          50067  5 +     54541 AGT-T-----G
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15964247  5 +  43084221 AGC-T-----G
i Chinchilla_lanigera.JH721867.1                        I 6 C 0
s Chiropotes_israelita.k141_1189915                         74871  5 +    196370 AGT-T-----G
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          19052  5 +     40510 AGT-T-----G
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15143689  5 -  15256731 AGT-T-----G
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      38153  5 -     53260 AGT-T-----G
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101148712  5 + 101219884 agt-t-----g
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                18581  5 -     21363 ATT-T-----G
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           763885  5 +    964067 ATT-T-----G
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_629495              2123  5 -      3120 AGA-T-----A
i Chrysochloris_asiatica.ChrAsi_scaffold_629495         I 4 C 0
s Condylura_cristata.JH655880.1                          60622081  5 +  78930452 AAC-T-----G
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         2110  5 -      5782 AGC-T-----C
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    I 1 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 282535  5 -    399297 AGT-T-----G
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53034903  5 +  72327488 GCT-T-----G
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              1496  5 -     22648 AGT-T-----G
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            57409  4 -     70449 -GC-T-----T
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  214257  5 -    956709 AGT-T-----G
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                20735  5 +     26546 AGT-T-----G
i Cuniculus_paca.CunPac_flattened_line_16637            I 6 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             61875  5 -    236241 AGT-T-----G
i Dasyprocta_punctata.DasPun_flattened_line_634         I 6 C 0
s Dasypus_novemcinctus.JH568778.1                          185553  5 -   6883506 GTT-T-----G
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16849000  5 +  31942871 AGT-T-----A
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80040514  5 -  96802777 agt-T-----G
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18701078  5 -  18957592 AGT-T-----G
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 326113  5 +    993696 aGC-C-----G
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   6754  5 +    151128 AGC-C-----G
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   159510  5 +    228994 AGC-T-----G
i Dinomys_branickii.DinBra_scaffold_1996                I 6 C 0
s Dipodomys_ordii.KN672545.1                              3660067  5 +   4240102 ACT-T-----G
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  2415  5 -     11986 ACT-T-----G
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                39839  5 -     73477 AGT-T-----A
i Dolichotis_patagonum.DolPat_scaffold_14102            I 6 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1496090  5 +   1727528 AGt-t-----g
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        243700  5 -    369425 Act-t-----g
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01198462.1                           1442  4 -      1901 GTC-T------
i Ellobius_talpinus.LOJH01198462.1                      C 0 N 0
s Enhydra_lutris.KZ291749.1                              85877366  4 +  99434291 -gt-t-----g
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4708834  5 +   6522550 AGT-T-----G
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5856479  5 -   7175178 atc-T-----G
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13354979  5 +  41866177 atc-T-----G
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          16469  5 +     92910 atc-T-----G
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11541006  5 +  16010500 cat-t-----g
i Erinaceus_europaeus.JH835290.1                        I 103 I 213
s Erythrocebus_patas.Contig8                             48780722  5 -  48907691 AGT-T-----G
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          318734  5 +    330699 AGT-T-----G
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             65191  5 +     89355 AGT-T-----G
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              9152  5 +     13586 AAT-T-----A
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_1015201                              2415  5 -      4292 AAT-T-----A
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            15548  5 +     36558 AAT-T-----A
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            11873  5 +     60246 AAT-T-----A
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                15356  5 +    109717 AAT-T-----A
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 3341  5 -     19505 AAT-T-----A
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                20013  5 +     27497 AAT-T-----A
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           22469  5 +     26808 AAT-T-----A
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                37204  5 +     46535 AAT-T-----A
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              19943  5 -     29447 AAT-T-----A
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.AANG03133801.1                                  451  4 -       736 -gc-t-----g
i Felis_catus.AANG03133801.1                            C 0 C 0
s Felis_catus_fca126.CM031420.1                         129285807  4 - 158578461 -gc-t-----g
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 26906  4 +     52776 -GC-T-----G
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13896025  5 -  19261668 AGT-T-----G
i Fukomys_damarensis.KN123630.1                         I 6 C 0
s Galago_moholi.ctg555                                     215206  5 -    847004 AGT-T-----A
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           17567  5 -     43889 AGT-T-----A
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          14710  5 +     27357 AGT-T-----A
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               159451  5 +    324696 AGT-T-----G
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    185888  5 -    189561 AGT-T-----G
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           16346  5 -     18683 AGT-T-----G
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               9138  5 -     14630 AGT-T-----G
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119656238  5 - 195582420 agt-t-----g
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   79663  5 +    118900 GGT-T-----G
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         5935  5 +     10286 AAT-C-----A
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             4413  5 -     11661 AAT-C-----A
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             9740  5 +     56096 AAT-C-----A
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        32989  5 -     42470 AAT-C-----A
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        49615  1 -     54384 A----------
i Hapalemur_occidentalis.k141_797938                    C 0 I 1
s Helogale_parvula.HelPar_flattened_line_22962              22550  4 +     53719 -GC-T-----T
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                32759  5 -     91191 AGT-T-----G
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2560524  5 +  31725842 AGT-T-----G
i Heterocephalus_glaber.JH602058.1                      I 6 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               62759  5 +     73687 AGT-T-----C
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              150516  6 +    277961 AGTCT-----G
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      282920  5 -    477199 AGT-T-----G
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_7653                5487  5 +     86108 AGT-T-----G
i Hipposideros_galeritus.HipGal_scaffold_7653           n 14 C 0
s Hoolock_leuconedys.ctg315                                   350143  5 +    431944 AGT-T-----G
i Hoolock_leuconedys.ctg315                                I 59 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 23021  1 -     67322 ----------T
i Hyaena_hyaena.HyaHya_flattened_line_20729             I 1 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           21127  5 -    119109 AGT-T-----A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       I 6 C 0
s Hylobates_abbotti.k141_1816750                             1624  5 +      3202 AGT-T-----G
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1633646                              1594  5 -      2102 AGT-T-----G
i Hylobates_agilis.k141_1633646                         C 0 C 0
s Hylobates_klossii.k141_468230                              3111  5 +      5464 AGT-T-----G
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14628459  5 -  25970782 AGT-T-----G
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            1010  5 +      4161 AGT-T-----G
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             37320  5 -     60944 AGT-T-----G
i Hylobates_pileatus_a.tarseq_592                         I 753 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7130258  5 +  13083262 AGG-t-----g
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   1413  5 +      3484 AAT-T-----A
i Indri_indri.k141_2197838                              I 16 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              12726  5 +     17520 AGT-T-----G
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8577308  5 +  11848649 AGT-T-----C
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               27347  5 +     37189 AGT-T-----G
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          53907  5 -    147782 AGT-T-----A
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    5446  5 +     26176 AGT-T-----A
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258411287  5 - 285822530 AAT-C-----A
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        28592  5 +     39228 AGT-T-----A
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            57956  5 +     63517 AGT-T-----A
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        36336  5 -     38897 AGT-T-----A
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      2382  5 -     13103 AGT-T-----A
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3091329  4 -   3498232 -gt-t-----g
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    20753  5 +     22452 AGT-T-----G
i Lepus_americanus.LepAme_scaffold_62849                I 3 C 0
s Lipotes_vexillifer.KE558548.1                            139660  5 +   3060487 agt-T-----G
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19252343  5 +  19376315 AGT-T-----G
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           15154  5 +     84689 AGT-T-----A
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3782893  5 +   6799190 AGT-T-----A
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20598686  5 -  62548349 agt-t-----c
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11095085  4 +  39895028 -gt-t-----g
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             24094  5 +     74745 AGT-T-----G
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12710555  5 +  12821369 AGT-T-----G
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                3128  5 -     26467 AGT-T-----G
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           50999  5 +     63263 AGT-T-----G
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 3109  5 -     26361 AGT-T-----G
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 6299  5 -      7381 AGT-T-----G
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  49528  5 -     79256 AGT-T-----G
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196039626  5 + 196197964 agt-t-----g
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11449796  5 +  11645122 agt-t-----g
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   8482  5 -     46448 AGT-T-----G
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                6145  5 -     13212 AGT-T-----G
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 19825  5 -     55006 AGT-T-----G
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43844940  5 +  43892939 AGT-T-----G
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               21109  5 -     24607 AGT-T-----G
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               8479  5 -     27140 AGT-T-----G
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43441515  5 -  43563597 AGT-T-----G
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4454319  5 -   4543643 AGT-T-----G
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            152093  4 +    252755 ag--t-----G
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             39682  4 +     58827 ag--t-----G
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36878127  5 +  64221397 AGG-t-----g
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       65484  5 -    234502 AGT-T-----G
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             6248  4 -     87323 -GT-T-----T
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 1151  5 +    115071 AGT-T-----G
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1051422  5 -  26018355 GCT-T-----G
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    2317  5 -     12939 AGT-T-----G
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16514352  5 +  47401472 aat-t-----a
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  41355  5 -     48017 AGA-T-----G
i Microgale_talazaci.MicTal_scaffold_34660              I 4 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               24824  5 -     32043 AGT-T-----G
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22824504  5 -  98408828 GCT-T-----A
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8212882  5 +  10048721 ggt-t-----g
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            37372  5 +     45743 GGT-T-----G
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         6061  5 +     29742 AGT-T-----G
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        16825  4 -    104932 -GT-T-----G
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     5034  5 -     12809 AAT-T-----A
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 150107  5 +    154973 AGT-T-----G
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                163363  5 +    265003 AGT-T-----G
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  6108  5 -     19904 TGT-T-----G
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  150225  4 -    168139 -GT-T-----T
i Mungos_mungo.MunMun_flattened_line_8729               I 20 C 0
s Murina_feae.MurFea_scaffold_2254                          24298  5 -    100666 AGT-T-----G
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70771723  5 +  92629107 AGC-T-----G
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75493777  5 +  98207768 AGC-T-----A
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67560538  5 +  89017189 AGC-T-----C
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74336503  5 +  97876770 AGC-T-----A
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             14751  5 +     98495 GGT-T-----G
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 6 C 0
s Mustela_putorius.JH417978.1                             4428087  4 -  28371801 -gt-t-----g
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myotis_brandtii.KE161952.1                               971168  5 +   8389877 AGT-T-----g
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5022589  5 +   6462685 AGT-t-----g
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3468672  5 -   3747815 AGT-t-----g
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        13913  5 +     66751 AGT-T-----G
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             7021  5 -      8794 AGT-T-----G
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            120257  5 +    362372 AGT-T-----G
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4490223  4 -  14209539 -gt-t-----g
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3954698  5 -   4490290 agt-T-----G
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  50445  5 +     94413 AGT-T-----G
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1817463                            750  5 -      1070 AGT-T-----G
i Nomascus_annamensis.k141_1817463                      C 0 C 0
s Nomascus_concolor.k141_70405                                750  5 +      1153 AGT-T-----G
i Nomascus_concolor.k141_70405                          I 59 C 0
s Nomascus_gabriellae.k141_1400361                            680  5 -      2203 AGT-T-----G
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_1022                             704  5 -     11638 AGT-T-----G
i Nomascus_siki_b.tarseq_1022                       C 0 C 0
s Nomascus_siki_a.k141_421408                                   594  5 +     16235 AGT-T-----G
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                37950  4 +   3668941 -gt-t-----g
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65571717  5 -  95554990 AGT-T-----A
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_771591                            15126  5 +     16181 AGT-T-----A
i Nycticebus_coucang.k141_771591                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65679913  5 +  89412551 AGT-T-----A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Odobenus_rosmarus.KB229369.1                             684926  4 -   3126709 -gt-t-----g
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1083540  5 +   1425656 AGt-t-----g
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         41623  5 +     78940 AGT-t-----g
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  130300  5 +    145789 GCT-T-----G
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  42993  5 +     62360 GCT-T-----G
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7228373  5 -   7562323 agt-T-----G
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              64154  5 -     66828 AGT-T-----A
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141883768  5 + 163896628 agt-t-----g
i Oryctolagus_cuniculus.CM000803.1                      I 3 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      315088  4 -    505867 -gt-t-----g
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        5066  5 -     53940 AGT-T-----A
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18013039  5 -  38779656 agt-t-----a
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134082545  5 - 275406953 AGT-T-----G
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      83780  5 +    140051 AGT-T-----G
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127578417  5 - 205426864 agt-t-----g
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120155577  5 - 196562556 agt-t-----g
i Pan_troglodytes.CM009241.2                            I 52 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  39826  4 +    295523 -GC-T-----G
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3643641  4 +  18214204 -gc-t-----g
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5033289  4 -   6340057 -gc-t-----g
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1071421  5 -   1292953 AGt-t-----g
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188160304  5 - 188283584 agt-t-----g
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              3394  5 +     25005 AGT-T-----G
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47517676  5 +  47705337 AGT-T-----G
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 71667  5 -    104429 AGT-T-----G
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   10199  5 +     14967 AGT-T-----G
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 6064  5 -      7628 AGT-T-----G
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    121327  4 -    135482 -GC-T-----G
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          10739  5 -     23713 AGT-T-----A
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           11879  5 +     61070 AGT-T-----A
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       2159  5 +     49596 ACT-T-----G
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4955356  5 -   8017169 gct-t-----g
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    17211  5 -     36578 TGT-T-----A
i Petromus_typicus.PetTyp_scaffold_33007                I 6 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              2839  5 +      8220 AGT-T-----G
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            99459  5 +    112873 AGT-T-----G
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           9310  5 +     21690 AGT-T-----G
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       25999  5 +     44506 AGT-T-----G
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        26212  5 +     67491 AGT-T-----G
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      16451  5 -     98129 AGT-T-----G
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     26052  5 +    147771 AGT-T-----G
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         2687  5 -     43940 AGT-T-----G
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          6770  5 -     55515 AGT-T-----G
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         26124  5 +    152463 AGT-T-----G
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       3932  5 -    119457 AGT-T-----G
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         15847  5 +    134592 AGT-T-----G
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          26434  5 -     75465 AGT-T-----G
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              191047  5 -    373494 agt-t-----g
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19811694  5 +  19899266 AGT-T-----G
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                3864  5 -      9567 AGT-T-----C
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6852661  5 +  12164890 aat-c-----a
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coronatus.k141_1353159                         7747  5 +     11805 AAT-T-----A
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           47082  5 +     52369 AAT-T-----A
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         39469  5 -     44753 AAT-T-----A
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            21392  5 +     27322 AAT-T-----A
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       21040  5 -     53241 AAT-T-----A
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         43303  5 -     48185 AAT-T-----A
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           38146  5 +     77221 AGT-T-----G
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            6007  5 -     27784 AGt-t-----g
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        250217  4 -    344369 -GT-T-----G
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Puma_concolor.QAVW01000427.1                          131539937  4 - 161321710 -gc-t-----g
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                20404  5 +     68503 AGT-T-----G
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13917559  5 +  90463843 AGT-C-----A
i Rattus_norvegicus.chr11                               I 6 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1792520  5 +   2252614 AGT-T-----G
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                       814  5 -      4338 AGT-T-----G
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15676456  5 -  43202129 agc-t-----g
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        8369  5 +     34089 AGC-T-----G
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              8309  5 -     60842 AGC-T-----G
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              8403  5 +     67014 AGC-T-----G
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              8380  5 +     60816 AGC-T-----G
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 8317  5 -     76454 AGC-T-----G
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17345104  5 -  30362882 ATC-T-----A
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         24425  5 -     62485 ATC-T-----A
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   39541  4 -    114521 -GT-T-----G
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  104925  5 -    120886 GCT-T-----G
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            23463  5 +    739146 AAT-T-----G
i Solenodon_paradoxus.SolPar_flattened_line_1012        I 11 C 0
s Sorex_araneus.JH798170.1                               17769916  5 -  27805282 att-t-----g
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2243963  5 +   2842873 agg-t-----g
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             238734  4 -    276980 -GT-T-----G
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            33142  4 +     62062 -GC-T-----T
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189274913  5 + 218635234 aGT-T-----G
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        18717  5 -  13920577 AGT-T-----G
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                2233  5 +     20549 AGT-T-----G
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               16693  5 +     45698 AGT-T-----G
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      810702  5 +   1148477 AGC-T-----G
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  61344  5 +     99546 AGC-T-----G
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               31287  5 +     42269 AGT-T-----G
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               64596  5 +     65473 AGT-T-----G
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194011837  5 - 194193292 agt-t-----g
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  138005  5 -    259118 AGT-T-----G
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   9441  5 +     90398 AGT-T-----G
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16089763  5 +  31416278 AGT-T-----C
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2797668  4 -   3938065 ttt-t------
i Tupaia_chinensis.KB320831.1                           I 2 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    9597 10 +     13056 TTT-TCAGTTG
i Tupaia_tana.TupTan_flattened_line_68454               I 2 C 0
s Tursiops_truncatus.MRVK01000923.1                      69317102  5 -  96451834 agt-T-----G
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                       9  5 +    136657 AAT-T-----A
i Uropsilus_gracilis.UroGra_scaffold_4115               N 0 C 0
s Ursus_maritimus.KK498671.1                              6520391  4 +  28682327 -gt-t-----g
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  9304  5 -     20643 AAT-T-----A
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             28839  5 -     33872 AAT-T-----A
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1528139  5 -   2331223 agt-t-----g
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                144315  4 -    281493 -GT-T-----G
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       131461  3 -    134049 --G-T-----G
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        219782  4 -    227762 -GT-T-----G
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_256618                      392  5 -      2259 AGT-T-----G
i Zapus_hudsonius.ZapHud_scaffold_256618                C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            1849  5 -     13665 AGT-T-----G
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           4544  0 -      6963 C
e Ochotona_princeps.JH802095.1                            4999348 675 -  23139505 I
e Tolypeutes_matacus.TolMat_scaffold_475685                   382  0 -      3104 C
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Elephantulus_edwardii.JH947210.1                        7830035 1277 +  15467074 I
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Echinops_telfairi.JH980316.1                           22999931  2 -  44670279 I
e Trachypithecus_pileatus.k141_1022309                       5226  0 +     13828 C
e Trachypithecus_phayrei.ctg3                            44662914  0 -  44834318 C
e Trachypithecus_obscurus.k141_1115109                       8130  0 -     28054 C
e Trachypithecus_melamera.k141_699241                        2986  0 -     24393 C
e Trachypithecus_leucocephalus.k141_381681                   3005  0 +     12481 C
e Trachypithecus_laotum.k141_760702                          4719  0 +     14371 C
e Trachypithecus_hatinhensis.k141_504423                     6067  0 -     15592 C
e Trachypithecus_germaini.k141_868450                        3883  0 -     11566 C
e Trachypithecus_geei.k141_670367                           46082  0 -     54611 C
e Trachypithecus_francoisi.k141_768164                       4689  0 -     14244 C
e Trachypithecus_cristatus.k141_1011511                      5261  0 -     12939 C
e Trachypithecus_crepusculus.k141_1588528                   23360  0 -     32910 C
e Trachypithecus_auratus.k141_738098                        29800  0 +     38948 C
e Semnopithecus_vetulus.k141_1143185                        16479  0 +     30600 C
e Semnopithecus_schistaceus.k141_387461                     33457  0 +     42640 C
e Semnopithecus_priam.k141_410937                           40312  0 +     46263 C
e Semnopithecus_johnii.k141_785014                         121532  0 +    130994 C
e Semnopithecus_hypoleucos.k141_761524                      11528  0 +     20762 C
e Semnopithecus_entellus.k141_1572367                        6153  0 +     15331 C
e Rhinopithecus_strykeri.ctg4                            44859307  0 -  45163003 C
e Rhinopithecus_bieti.k119_554384                            2917  0 -     17045 C
e Pygathrix_nigripes_a.k141_101123                             8537  0 +     18040 C
e Pygathrix_nigripes_b.ctg79                                 6809148  0 +   6970761 C
e Pygathrix_cinerea.k141_374971                             32651  0 +     56732 C
e Propithecus_coquerelli.NW_012147863.1                     21633  0 -     30946 C
e Presbytis_mitrata.k141_860013                              8661  0 +     14865 C
e Presbytis_comata.k141_672698                               8546  0 -     15069 C
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000036.1               26743271  0 +  26888534 C
e Piliocolobus_kirkii.k141_929665                            4788  0 +      7694 C
e Piliocolobus_gordonorum.k141_1270531                       5421  0 -     17985 C
e Piliocolobus_badius.k141_1987485                           4802  0 -      5908 C
e Octodon_degus.JH651621.1                                3687420 1881 +  10294119 I
e Nasalis_larvatus.k141_153429                              11264  0 +     48152 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     91920 1922 -    117718 I
e Hystrix_cristata.HysCri_scaffold_50788                     7688 1865 +     22540 I
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 32592 1717 -     67205 I
e Colobus_polykomos.k141_1406057                            19335  0 +     23629 C
e Colobus_guereza.LG08                                  147667351  0 + 156195979 C
e Colobus_angolensis.KN985967.1                          10889423  0 +  10971483 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               17445 3 +    209709 CCA
s Acinonyx_jubatus.LLWD01000356.1                         2039416 3 +   3721120 tca
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    117663 3 -    189883 TCA
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10663101 3 +  23371972 tcA
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7099898 3 -  16596857 tca
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   21621 3 -     22067 CCA
i Allactaga_bullata.AllBul_scaffold_70162               C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   5318 3 -     60446 CCA
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         6035 3 -     29318 CCA
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         4973 3 +     38766 CCA
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          5929 3 -     80423 CCA
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                               901 3 +     19852 ACA
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                3157 3 -     12443 ACA
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                              456 3 +      5070 ACA
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                  201 3 -      1641 ACA
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          2940 3 -     24210 ACA
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           29522 3 -     30219 ACA
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_405616                              5358 3 +     16794 ACA
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                             490 3 -      1470 ACA
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             4635 3 -      9835 ACA
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3525417 3 +   4113121 TCA
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      392449 3 -    631301 CCA
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             2848 3 +     55446 TCA
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 66248 3 +     78111 CCA
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            9194 3 +     22701 CCA
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5753152 3 +   9889416 CTA
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             9750 3 -    104377 CCA
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               9757 3 +     23246 CCA
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     2287 3 +     11424 TCA
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        6370 3 +      9265 TCA
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                10874 3 -     29036 TTG
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9543044 3 +  39197703 ACA
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             64317 3 +     85812 ACA
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                15330 3 +     89302 ACA
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             19831 3 -     58268 ACA
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             67825 3 +    119057 ACA
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               9794 3 -     25888 ACA
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                10845 3 -     16375 TCA
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               4461 3 +      6337 TCA
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26383896 3 +  51448160 TCA
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        9069 3 -     13118 TCA
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   47879 3 -     72089 TCA
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   302023 3 -   6870073 tca
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22956121 3 + 161108492 tca
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     418386 3 +    998990 tca
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22664775 3 + 158972876 tca
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               674538 3 +   1914593 tca
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               117697 3 -    171031 CCA
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 16717 3 +    125063 CCA
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                18764 3 -    216513 CCA
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       11307 3 -    134917 CCA
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3223034 3 -   8989139 tag
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           400736 3 -  15254737 tag
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2976472 3 +   6889770 tag
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11526239 3 +  39901454 TCA
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   21213 3 +     87036 TCA
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11272922 3 -  35597290 tca
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11095633 3 +  39895921 tca
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16462418 3 -  44759192 tca
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21330497 3 + 157394656 tca
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135711714 3 - 157403528 tca
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          313435 3 +    345090 TCA
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               61656 3 +     67245 TCA
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_417865                     80 3 -       402 TCA
i Castor_canadensis.CasCan_scaffold_417865              C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   162560 3 -    276539 TCA
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15789568 3 -  24422027 TCC
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15801507 3 -  24440124 TCC
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       179679 3 +    436027 TCC
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18894528 3 -  29618158 CCA
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                12072 3 -     26817 CCA
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                16316 3 +     25043 CCA
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                        12450 3 +     21754 TCA
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4367471 3 +   7569818 TCA
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         7228 3 -      9338 TCA
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6559259 3 +   6739814 CCA
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      30736 3 +     60454 CCA
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          5940 3 -     21101 CCA
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         63250 3 -    107033 CCA
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        6113 3 -     17608 CCA
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          3278 3 +     45019 CCA
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           3338 3 +     15177 CCA
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          6160 3 +     16677 CCA
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           28350 3 +     35983 CCA
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11994881 3 +  12117833 CCA
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46481642 3 +  46592721 CCA
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      45191 3 -     45581 CCA
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       6174 3 +     35577 CCA
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        5968 3 -     25661 CCA
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        5925 3 -     17744 CCA
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        25509 3 +     37128 CCA
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           63070 3 -     68416 TCA
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                           12176 3 +     13308 TCA
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             9355 3 -     18223 CCA
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              1094 3 +    188999 CCA
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           45392 3 +     57117 CCA
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          50072 3 +     54541 CCA
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15964252 3 +  43084221 TCA
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         74876 3 +    196370 CCA
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          19057 3 +     40510 CCA
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15143694 3 -  15256731 CCA
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      38158 3 -     53260 CCA
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101148717 3 + 101219884 CCA
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                18586 3 -     21363 TCA
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           763890 3 +    964067 TCA
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_629495              2128 3 -      3120 TCA
i Chrysochloris_asiatica.ChrAsi_scaffold_629495         C 0 C 0
s Condylura_cristata.JH655880.1                          60622086 3 +  78930452 TCT
i Condylura_cristata.JH655880.1                         C 0 I 6
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         2115 3 -      5782 TCA
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 282540 3 -    399297 TCA
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53034908 3 +  72327488 TCC
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              1501 3 -     22648 GTA
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            57413 3 -     70449 TCA
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  214262 3 -    956709 TCA
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                20740 3 +     26546 TCA
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             61880 3 -    236241 TCA
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          185558 3 -   6883506 TTG
i Dasypus_novemcinctus.JH568778.1                       C 0 I 5
s Daubentonia_madagascariensis.ctg11                     16849005 3 +  31942871 GAA
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80040519 3 -  96802777 TCA
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18701083 3 -  18957592 TCA
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 326118 3 +    993696 TCA
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   6759 3 +    151128 TCA
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   159515 3 +    228994 TCA
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3660072 3 +   4240102 GAG
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  2420 3 -     11986 GAG
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                39844 3 -     73477 TCC
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1496095 3 +   1727528 tca
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        243705 3 -    369425 taa
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Enhydra_lutris.KZ291749.1                              85877370 3 +  99434291 tca
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4708839 3 +   6522550 CCA
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5856484 3 -   7175178 TCA
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13354984 3 +  41866177 TCA
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          16474 3 +     92910 TCA
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11541224 3 +  16010500 tca
i Erinaceus_europaeus.JH835290.1                        I 213 C 0
s Erythrocebus_patas.Contig8                             48780727 3 -  48907691 TCA
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          318739 3 +    330699 TCA
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             65196 3 +     89355 TCA
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              9157 3 +     13586 TCA
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_1015201                              2420 3 -      4292 TCA
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            15553 3 +     36558 TCA
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            11878 3 +     60246 TCA
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                15361 3 +    109717 TCA
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 3346 3 -     19505 TCA
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                20018 3 +     27497 TCA
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           22474 3 +     26808 TCA
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                37209 3 +     46535 TCA
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              19948 3 -     29447 TCA
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.AANG03133801.1                                  455 3 -       736 tca
i Felis_catus.AANG03133801.1                            C 0 C 0
s Felis_catus_fca126.CM031420.1                         129285811 3 - 158578461 tca
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 26910 3 +     52776 TCA
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13896030 3 -  19261668 TCA
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     215211 3 -    847004 CCA
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           17572 3 -     43889 CCA
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          14715 3 +     27357 CCA
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               159456 3 +    324696 TTA
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    185893 3 -    189561 TCA
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           16351 3 -     18683 TCA
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               9143 3 -     14630 CCA
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119656243 3 - 195582420 CCA
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   79668 3 +    118900 CCA
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         5940 3 +     10286 TCA
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             4418 3 -     11661 TCA
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             9745 3 +     56096 TCA
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        32994 3 -     42470 TCA
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        49617 3 -     54384 TCA
i Hapalemur_occidentalis.k141_797938                    I 1 C 0
s Helogale_parvula.HelPar_flattened_line_22962              22554 3 +     53719 TCA
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                32764 3 -     91191 TCA
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2560529 3 +  31725842 TTA
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               62764 3 +     73687 TCA
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              150522 3 +    277961 TCA
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      282925 3 -    477199 TCA
i Hipposideros_armiger.JXIK01001085.1                   C 0 I 6
s Hipposideros_galeritus.HipGal_scaffold_7653                5492 3 +     86108 TCA
i Hipposideros_galeritus.HipGal_scaffold_7653           C 0 C 0
s Hoolock_leuconedys.ctg315                                   350148 3 +    431944 CCA
i Hoolock_leuconedys.ctg315                                C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 23022 3 -     67322 TCA
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           21132 3 -    119109 TCC
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_1816750                             1629 3 +      3202 CCA
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1633646                              1599 3 -      2102 CCA
i Hylobates_agilis.k141_1633646                         C 0 C 0
s Hylobates_klossii.k141_468230                              3116 3 +      5464 CCA
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14628464 3 -  25970782 CCA
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            1015 3 +      4161 CCA
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             37325 3 -     60944 CCA
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7130263 3 +  13083262 tca
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   1418 3 +      3484 TCA
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              12731 3 +     17520 TCA
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8577313 3 +  11848649 CCA
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               27352 3 +     37189 TCA
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          53912 3 -    147782 ACA
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    5451 3 +     26176 TCA
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258411292 3 - 285822530 TCA
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        28597 3 +     39228 TCA
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            57961 3 +     63517 TCA
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        36341 3 -     38897 TCA
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      2387 3 -     13103 TCA
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3091333 3 -   3498232 tca
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    20758 3 +     22452 TCA
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            139665 3 +   3060487 TCA
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19252348 3 +  19376315 CCA
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           15159 3 +     84689 CCA
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3782898 3 +   6799190 CCA
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20598691 3 -  62548349 tca
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11095089 3 +  39895028 tca
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             24099 3 +     74745 CCA
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12710560 3 +  12821369 CCA
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                3133 3 -     26467 CCA
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           51004 3 +     63263 CCA
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 3114 3 -     26361 CCA
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 6304 3 -      7381 CCA
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  49533 3 -     79256 CCA
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196039631 3 + 196197964 CCA
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11449801 3 +  11645122 CCA
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   8487 3 -     46448 CCA
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                6150 3 -     13212 CCA
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 19830 3 -     55006 CCA
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43844945 3 +  43892939 CCA
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               21114 3 -     24607 CCA
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               8484 3 -     27140 CCA
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43441520 3 -  43563597 CCA
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4454324 3 -   4543643 CCA
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            152097 3 +    252755 CCA
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             39686 3 +     58827 CCA
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36878132 3 +  64221397 tca
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       65489 3 -    234502 TCA
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             6252 3 -     87323 TCA
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 1156 3 +    115071 TCA
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1051427 3 -  26018355 TCC
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    2322 3 -     12939 TCA
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16514357 3 +  47401472 tca
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  41360 3 -     48017 AAA
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               24829 3 -     32043 TTA
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22824509 3 -  98408828 TCA
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8212887 3 +  10048721 tca
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            37377 3 +     45743 TCA
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         6066 3 +     29742 CCA
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        16829 3 -    104932 TCA
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     5039 3 -     12809 TCA
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 150112 3 +    154973 TCA
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                163368 3 +    265003 TCA
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  6113 3 -     19904 CCA
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  150229 3 -    168139 TCA
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          24303 3 -    100666 CCA
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70771728 3 +  92629107 TTG
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75493782 3 +  98207768 TTG
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67560543 3 +  89017189 TTG
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74336508 3 +  97876770 TTG
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             14756 3 +     98495 TCA
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4428091 3 -  28371801 tca
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myotis_brandtii.KE161952.1                               971173 3 +   8389877 cca
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5022594 3 +   6462685 cca
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3468677 3 -   3747815 cca
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        13918 3 +     66751 CTA
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             7026 3 -      8794 TCA
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 I 510
s Nannospalax_galili.KL201303.1                            120262 3 +    362372 TCA
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4490227 3 -  14209539 tca
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3954703 3 -   4490290 TCA
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  50450 3 +     94413 TCA
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1817463                            755 3 -      1070 CCA
i Nomascus_annamensis.k141_1817463                      C 0 C 0
s Nomascus_concolor.k141_70405                                755 3 +      1153 CCA
i Nomascus_concolor.k141_70405                          C 0 C 0
s Nomascus_gabriellae.k141_1400361                            685 3 -      2203 CCA
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_1022                             709 3 -     11638 CCA
i Nomascus_siki_b.tarseq_1022                       C 0 C 0
s Nomascus_siki_a.k141_421408                                   599 3 +     16235 CCA
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                37954 3 +   3668941 tca
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65571722 3 -  95554990 CCG
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_771591                            15131 3 +     16181 CCG
i Nycticebus_coucang.k141_771591                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65679918 3 +  89412551 CCG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Odobenus_rosmarus.KB229369.1                             684930 3 -   3126709 tca
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1083545 3 +   1425656 tca
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         41628 3 +     78940 tca
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  130305 3 +    145789 CCA
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  42998 3 +     62360 TCA
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7228378 3 -   7562323 TCA
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              64159 3 -     66828 TCA
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141883773 3 + 163896628 tca
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      315092 3 -    505867 tca
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        5071 3 -     53940 CCA
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18013044 3 -  38779656 cca
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134082550 3 - 275406953 TCA
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      83785 3 +    140051 TCA
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127578422 3 - 205426864 CCA
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120155582 3 - 196562556 CCA
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  39830 3 +    295523 TCA
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3643645 3 +  18214204 TCA
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5033293 3 -   6340057 tca
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1071426 3 -   1292953 tca
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188160309 3 - 188283584 CCA
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              3399 3 +     25005 CCA
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47517681 3 +  47705337 CCA
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 71672 3 -    104429 CCA
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   10204 3 +     14967 CCA
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 6069 3 -      7628 CCA
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    121331 3 -    135482 TCC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          10744 3 -     23713 TCA
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           11884 3 +     61070 TCA
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       2164 3 +     49596 AAG
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4955361 3 -   8017169 tta
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    17216 3 -     36578 CTG
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              2844 3 +      8220 TCA
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            99464 3 +    112873 CCA
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           9315 3 +     21690 TCA
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       26004 3 +     44506 CCA
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        26217 3 +     67491 CCA
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      16456 3 -     98129 CCA
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     26057 3 +    147771 CCA
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         2692 3 -     43940 CCA
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          6775 3 -     55515 CCA
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         26129 3 +    152463 CCA
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       3937 3 -    119457 CCA
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         15852 3 +    134592 CCA
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          26439 3 -     75465 CCA
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              191052 3 -    373494 CCA
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19811699 3 +  19899266 CCA
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                3869 3 -      9567 TCA
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6852666 3 +  12164890 tca
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coronatus.k141_1353159                         7752 3 +     11805 TCA
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           47087 3 +     52369 TCA
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         39474 3 -     44753 GCA
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            21397 3 +     27322 TCA
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       21045 3 -     53241 TCA
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         43308 3 -     48185 TCA
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           38151 3 +     77221 TCA
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            6012 3 -     27784 tca
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        250221 3 -    344369 TCA
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Puma_concolor.QAVW01000427.1                          131539941 3 - 161321710 tca
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                20409 3 +     68503 TCA
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13917564 3 +  90463843 TCC
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1792525 3 +   2252614 CTA
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                       819 3 -      4338 TCA
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15676461 3 -  43202129 cca
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        8374 3 +     34089 CCA
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              8314 3 -     60842 CCA
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              8408 3 +     67014 CCA
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              8385 3 +     60816 CCA
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 8322 3 -     76454 CCA
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17345109 3 -  30362882 CCA
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         24430 3 -     62485 CCA
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   39545 3 -    114521 TCA
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  104930 3 -    120886 CTG
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            23468 3 +    739146 TCA
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17769921 3 -  27805282 gta
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2243968 3 +   2842873 tca
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             238738 3 -    276980 TCA
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            33146 3 +     62062 TCA
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189274918 3 + 218635234 TCG
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        18722 3 -  13920577 CCA
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                2238 3 +     20549 TCA
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               16698 3 +     45698 TCA
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 I 511
s Tapirus_indicus.TapInd_scaffold_176                      810707 3 +   1148477 TCA
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  61349 3 +     99546 TCA
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               31292 3 +     42269 TCA
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               64601 3 +     65473 TCA
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194011842 3 - 194193292 CCA
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  138010 3 -    259118 TCA
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   9446 3 +     90398 TCA
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16089768 3 +  31416278 TCA
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2797672 3 -   3938065 tca
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    9607 3 +     13056 CCA
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69317107 3 -  96451834 TCA
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                      14 3 +    136657 TTA
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 C 0
s Ursus_maritimus.KK498671.1                              6520395 3 +  28682327 tcA
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  9309 3 -     20643 TCA
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             28844 3 -     33872 TCA
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1528144 3 -   2331223 tag
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                144319 3 -    281493 TCA
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       131464 3 -    134049 TCA
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        219786 3 -    227762 TCA
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_256618                      397 3 -      2259 TTG
i Zapus_hudsonius.ZapHud_scaffold_256618                C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            1854 3 -     13665 TCA
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           4544 0 -      6963 C
e Ochotona_princeps.JH802095.1                            4999348 675 -  23139505 I
e Tolypeutes_matacus.TolMat_scaffold_475685                   382 0 -      3104 C
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Elephantulus_edwardii.JH947210.1                        7830035 1277 +  15467074 I
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Echinops_telfairi.JH980316.1                           22999931 2 -  44670279 I
e Trachypithecus_pileatus.k141_1022309                       5226 0 +     13828 C
e Trachypithecus_phayrei.ctg3                            44662914 0 -  44834318 C
e Trachypithecus_obscurus.k141_1115109                       8130 0 -     28054 C
e Trachypithecus_melamera.k141_699241                        2986 0 -     24393 C
e Trachypithecus_leucocephalus.k141_381681                   3005 0 +     12481 C
e Trachypithecus_laotum.k141_760702                          4719 0 +     14371 C
e Trachypithecus_hatinhensis.k141_504423                     6067 0 -     15592 C
e Trachypithecus_germaini.k141_868450                        3883 0 -     11566 C
e Trachypithecus_geei.k141_670367                           46082 0 -     54611 C
e Trachypithecus_francoisi.k141_768164                       4689 0 -     14244 C
e Trachypithecus_cristatus.k141_1011511                      5261 0 -     12939 C
e Trachypithecus_crepusculus.k141_1588528                   23360 0 -     32910 C
e Trachypithecus_auratus.k141_738098                        29800 0 +     38948 C
e Semnopithecus_vetulus.k141_1143185                        16479 0 +     30600 C
e Semnopithecus_schistaceus.k141_387461                     33457 0 +     42640 C
e Semnopithecus_priam.k141_410937                           40312 0 +     46263 C
e Semnopithecus_johnii.k141_785014                         121532 0 +    130994 C
e Semnopithecus_hypoleucos.k141_761524                      11528 0 +     20762 C
e Semnopithecus_entellus.k141_1572367                        6153 0 +     15331 C
e Rhinopithecus_strykeri.ctg4                            44859307 0 -  45163003 C
e Rhinopithecus_bieti.k119_554384                            2917 0 -     17045 C
e Pygathrix_nigripes_a.k141_101123                             8537 0 +     18040 C
e Pygathrix_nigripes_b.ctg79                                 6809148 0 +   6970761 C
e Pygathrix_cinerea.k141_374971                             32651 0 +     56732 C
e Propithecus_coquerelli.NW_012147863.1                     21633 0 -     30946 C
e Presbytis_mitrata.k141_860013                              8661 0 +     14865 C
e Presbytis_comata.k141_672698                               8546 0 -     15069 C
e Pithecia_vanzolinii.k141_831006                           15424 0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514 0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521 0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292 0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093 0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038 0 +     78826 C
e Pithecia_albicans.k141_991845                             45662 0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000036.1               26743271 0 +  26888534 C
e Piliocolobus_kirkii.k141_929665                            4788 0 +      7694 C
e Piliocolobus_gordonorum.k141_1270531                       5421 0 -     17985 C
e Piliocolobus_badius.k141_1987485                           4802 0 -      5908 C
e Octodon_degus.JH651621.1                                3687420 1881 +  10294119 I
e Nasalis_larvatus.k141_153429                              11264 0 +     48152 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     91920 1922 -    117718 I
e Hystrix_cristata.HysCri_scaffold_50788                     7688 1865 +     22540 I
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 32592 1717 -     67205 I
e Colobus_polykomos.k141_1406057                            19335 0 +     23629 C
e Colobus_guereza.LG08                                  147667351 0 + 156195979 C
e Colobus_angolensis.KN985967.1                          10889423 0 +  10971483 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               17448 2 +    209709 TA
s Acinonyx_jubatus.LLWD01000356.1                         2039419 2 +   3721120 ta
i Acinonyx_jubatus.LLWD01000356.1                       C 0 I 10
s Acomys_cahirinus.AcoCah_scaffold_1625                    117666 2 -    189883 TA
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10663104 2 +  23371972 TA
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7099901 2 -  16596857 ta
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_70162                   21624 2 -     22067 TA
i Allactaga_bullata.AllBul_scaffold_70162               C 0 N 0
s Allenopithecus_nigroviridis.k141_2469532                   5321 2 -     60446 TA
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         6038 2 -     29318 TA
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         4976 2 +     38766 TA
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          5932 2 -     80423 TA
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                               904 2 +     19852 TA
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                3160 2 -     12443 TA
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                              459 2 +      5070 TA
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                  204 2 -      1641 TA
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          2943 2 -     24210 TA
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           29525 2 -     30219 TA
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_405616                              5361 2 +     16794 TA
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                             493 2 -      1470 TA
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             4638 2 -      9835 TA
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3525420 2 +   4113121 TA
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      392452 2 -    631301 TA
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             2851 2 +     55446 TA
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 66251 2 +     78111 TA
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            9197 2 +     22701 TA
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5753155 2 +   9889416 TA
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             9753 2 -    104377 TA
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               9760 2 +     23246 TA
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     2290 2 +     11424 TA
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        6373 2 +      9265 TA
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                10877 2 -     29036 TA
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9543047 2 +  39197703 TA
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             64320 2 +     85812 TA
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                15333 2 +     89302 TA
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             19834 2 -     58268 TA
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             67828 2 +    119057 TA
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               9797 2 -     25888 TA
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                10848 2 -     16375 TA
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               4464 2 +      6337 TA
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26383899 2 +  51448160 TA
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        9072 2 -     13118 TA
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   47882 2 -     72089 TA
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   302026 2 -   6870073 ta
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22956124 2 + 161108492 ta
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     418389 2 +    998990 ta
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22664778 2 + 158972876 ta
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               674541 2 +   1914593 ta
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               117700 2 -    171031 AA
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 16720 2 +    125063 AA
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                18767 2 -    216513 AA
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       11310 2 -    134917 AA
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3223037 2 -   8989139 ta
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           400739 2 -  15254737 ta
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2976475 2 +   6889770 ta
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11526242 2 +  39901454 TA
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   21216 2 +     87036 TA
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11272925 2 -  35597290 ta
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11095636 2 +  39895921 ta
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16462421 2 -  44759192 ta
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21330500 2 + 157394656 ta
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135711717 2 - 157403528 ta
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          313438 2 +    345090 TA
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               61659 2 +     67245 TA
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_417865                     83 2 -       402 TA
i Castor_canadensis.CasCan_scaffold_417865              C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   162563 1 -    276539 T-
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15789571 2 -  24422027 TA
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15801510 2 -  24440124 TA
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       179682 2 +    436027 TA
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18894531 2 -  29618158 TA
i Cebus_albifrons.Contig22                              C 0 I 3
s Cebus_olivaceus.k141_93739                                12075 2 -     26817 TA
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                16319 2 +     25043 TA
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                        12453 2 +     21754 TA
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4367474 2 +   7569818 TA
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         7231 2 -      9338 TA
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6559262 2 +   6739814 TA
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      30739 2 +     60454 TA
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          5943 2 -     21101 TA
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         63253 2 -    107033 TA
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        6116 2 -     17608 TA
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          3281 2 +     45019 TA
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           3341 2 +     15177 TA
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          6163 2 +     16677 TA
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           28353 2 +     35983 TA
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11994884 2 +  12117833 TA
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46481645 2 +  46592721 TA
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      45194 2 -     45581 TA
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       6177 2 +     35577 TA
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        5971 2 -     25661 TA
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        5928 2 -     17744 TA
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        25512 2 +     37128 TA
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           63073 2 -     68416 TA
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                           12179 2 +     13308 TA
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             9358 2 -     18223 TA
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              1097 2 +    188999 TA
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           45395 2 +     57117 TA
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          50075 2 +     54541 TA
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15964255 2 +  43084221 TA
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         74879 2 +    196370 AA
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          19060 2 +     40510 AA
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15143697 2 -  15256731 TA
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      38161 2 -     53260 TA
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101148720 2 + 101219884 TA
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                18589 2 -     21363 TA
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           763893 2 +    964067 TA
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_629495              2131 2 -      3120 TA
i Chrysochloris_asiatica.ChrAsi_scaffold_629495         C 0 C 0
s Condylura_cristata.JH655880.1                          60622095 2 +  78930452 TA
i Condylura_cristata.JH655880.1                         I 6 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         2118 2 -      5782 CA
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 282543 2 -    399297 TA
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53034911 2 +  72327488 TG
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              1504 2 -     22648 TA
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            57416 2 -     70449 TA
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 I 10
s Ctenodactylus_gundi.CteGun_scaffold_447                  214265 2 -    956709 TC
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                20743 2 +     26546 TA
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             61883 2 -    236241 TA
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          185566 2 -   6883506 TA
i Dasypus_novemcinctus.JH568778.1                       I 5 C 0
s Daubentonia_madagascariensis.ctg11                     16849008 2 +  31942871 TA
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80040522 2 -  96802777 TA
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18701086 2 -  18957592 TA
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 326121 2 +    993696 TA
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   6762 2 +    151128 TA
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   159518 2 +    228994 TA
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3660075 2 +   4240102 TA
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  2423 2 -     11986 TA
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                39847 2 -     73477 TA
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1496098 2 +   1727528 ta
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        243708 2 -    369425 ta
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Enhydra_lutris.KZ291749.1                              85877373 2 +  99434291 ta
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4708842 2 +   6522550 TA
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5856487 2 -   7175178 TA
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13354987 2 +  41866177 TA
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          16477 2 +     92910 TA
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11541227 2 +  16010500 ta
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48780730 2 -  48907691 TA
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          318742 2 +    330699 TA
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             65199 2 +     89355 TA
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              9160 2 +     13586 TA
i Eulemur_albifrons.k141_715837                         C 0 I 56
s Eulemur_collaris.k141_1015201                              2423 2 -      4292 TA
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            15556 2 +     36558 TA
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            11881 2 +     60246 TA
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                15364 2 +    109717 TA
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 3349 2 -     19505 TA
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                20021 2 +     27497 TA
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           22477 2 +     26808 TA
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                37212 2 +     46535 TA
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              19951 2 -     29447 TA
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.AANG03133801.1                                  458 2 -       736 ta
i Felis_catus.AANG03133801.1                            C 0 I 10
s Felis_catus_fca126.CM031420.1                         129285814 2 - 158578461 ta
i Felis_catus_fca126.CM031420.1                         C 0 I 10
s Felis_nigripes.FelNig_flattened_line_8080                 26913 2 +     52776 TA
i Felis_nigripes.FelNig_flattened_line_8080             C 0 I 10
s Fukomys_damarensis.KN123630.1                          13896033 2 -  19261668 TA
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     215214 2 -    847004 TA
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           17575 2 -     43889 TA
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          14718 2 +     27357 TA
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               159459 2 +    324696 TA
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    185896 2 -    189561 TA
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           16354 2 -     18683 CA
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               9146 2 -     14630 TA
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119656246 2 - 195582420 TA
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   79671 2 +    118900 TA
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         5943 2 +     10286 TA
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             4421 2 -     11661 TA
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             9748 2 +     56096 TA
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        32997 2 -     42470 TA
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        49620 2 -     54384 TA
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              22557 2 +     53719 TA
i Helogale_parvula.HelPar_flattened_line_22962          C 0 I 10
s Hemitragus_hylocrius.HemHyl_scaffold_16669                32767 2 -     91191 TA
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2560532 2 +  31725842 TA
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               62767 2 +     73687 TT
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              150525 2 +    277961 TA
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001052.1                      277017 2 -    479840 TA
i Hipposideros_armiger.JXIK01001052.1                   n 6 I 55
s Hipposideros_galeritus.HipGal_scaffold_7653                5495 2 +     86108 TA
i Hipposideros_galeritus.HipGal_scaffold_7653           C 0 I 49
s Hoolock_leuconedys.ctg315                                   350151 2 +    431944 TA
i Hoolock_leuconedys.ctg315                                C 0 I 56
s Hyaena_hyaena.HyaHya_flattened_line_20729                 23025 2 -     67322 TA
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 I 10
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           21135 2 -    119109 TA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_1816750                             1632 2 +      3202 TA
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1633646                              1602 2 -      2102 TA
i Hylobates_agilis.k141_1633646                         C 0 C 0
s Hylobates_klossii.k141_468230                              3119 2 +      5464 TA
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14628467 2 -  25970782 TA
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            1018 2 +      4161 TA
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             37328 2 -     60944 TA
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7130266 2 +  13083262 ta
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   1421 2 +      3484 TA
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              12734 2 +     17520 TA
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8577316 2 +  11848649 TA
i Jaculus_jaculus.JH725517.1                            C 0 I 351
s Kogia_breviceps.KogBre_flattened_line_35920               27355 2 +     37189 TA
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          53915 2 -    147782 TA
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    5454 2 +     26176 TA
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258411295 2 - 285822530 TA
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        28600 2 +     39228 TA
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            57964 2 +     63517 TA
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        36344 2 -     38897 TA
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      2390 2 -     13103 TA
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3091336 2 -   3498232 ta
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    20761 2 +     22452 CA
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            139668 2 +   3060487 TA
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19252351 2 +  19376315 TA
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           15162 2 +     84689 CA
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3782901 2 +   6799190 CA
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20598694 2 -  62548349 aG
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11095092 2 +  39895028 ta
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             24102 2 +     74745 TA
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12710563 2 +  12821369 TA
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                3136 2 -     26467 TA
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           51007 2 +     63263 TA
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 3117 2 -     26361 TA
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 6307 2 -      7381 TA
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  49536 2 -     79256 TA
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196039634 2 + 196197964 TA
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11449804 2 +  11645122 TA
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   8490 2 -     46448 TA
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                6153 2 -     13212 TA
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 19833 2 -     55006 TA
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43844948 2 +  43892939 TA
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               21117 2 -     24607 TA
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               8487 2 -     27140 TA
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43441523 2 -  43563597 TA
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4454327 2 -   4543643 TA
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            152100 2 +    252755 TA
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             39689 2 +     58827 TA
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36878135 2 +  64221397 ta
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       65492 2 -    234502 CA
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             6255 2 -     87323 TA
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 1159 2 +    115071 TG
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1051430 2 -  26018355 TG
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    2325 2 -     12939 TA
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16514360 2 +  47401472 ta
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  41363 2 -     48017 TA
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               24832 2 -     32043 TG
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22824512 2 -  98408828 TA
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8212890 2 +  10048721 ta
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            37380 2 +     45743 TA
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         6069 2 +     29742 TA
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        16832 2 -    104932 TA
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     5042 2 -     12809 TA
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 150115 2 +    154973 TA
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                163371 2 +    265003 TA
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  6116 2 -     19904 TA
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  150232 2 -    168139 TA
i Mungos_mungo.MunMun_flattened_line_8729               C 0 I 10
s Murina_feae.MurFea_scaffold_2254                          24306 2 -    100666 TA
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70771731 2 +  92629107 TA
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75493785 2 +  98207768 TA
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67560546 2 +  89017189 TA
i Mus_pahari.LT608305.1                                 C 0 I 6
s Mus_spretus.CM004110.1                                 74336511 2 +  97876770 TA
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             14759 2 +     98495 TA
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4428094 2 -  28371801 ta
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myotis_brandtii.KE161952.1                               971176 2 +   8389877 ta
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5022597 2 +   6462685 ta
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3468680 2 -   3747815 ta
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        13921 2 +     66751 TA
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             7539 2 -      8794 TA
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        I 510 C 0
s Nannospalax_galili.KL201303.1                            120265 2 +    362372 TA
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4490230 2 -  14209539 ta
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3954706 2 -   4490290 TA
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  50453 2 +     94413 TA
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 I 5
s Nomascus_annamensis.k141_1817463                            758 2 -      1070 TA
i Nomascus_annamensis.k141_1817463                      C 0 C 0
s Nomascus_concolor.k141_70405                                758 2 +      1153 TA
i Nomascus_concolor.k141_70405                          C 0 I 55
s Nomascus_gabriellae.k141_1400361                            688 2 -      2203 TA
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_1022                             712 2 -     11638 TA
i Nomascus_siki_b.tarseq_1022                       C 0 C 0
s Nomascus_siki_a.k141_421408                                   602 2 +     16235 TA
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                37957 2 +   3668941 ta
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65571725 2 -  95554990 TA
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_771591                            15134 2 +     16181 TA
i Nycticebus_coucang.k141_771591                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65679921 2 +  89412551 TA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Odobenus_rosmarus.KB229369.1                             684933 2 -   3126709 ta
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1083548 2 +   1425656 ta
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         41631 2 +     78940 ta
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  130308 2 +    145789 TA
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  43001 2 +     62360 TA
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7228381 2 -   7562323 TA
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              64162 2 -     66828 TA
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141883776 2 + 163896628 ca
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      315095 2 -    505867 ta
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        5074 2 -     53940 TA
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18013047 2 -  38779656 ta
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134082553 2 - 275406953 TA
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      83788 2 +    140051 TA
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127578425 2 - 205426864 TA
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120155585 2 - 196562556 TA
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  39833 2 +    295523 TA
i Panthera_onca.PanOnc_flattened_line_1615              C 0 I 10
s Panthera_pardus.KV860323.1                              3643648 2 +  18214204 TA
i Panthera_pardus.KV860323.1                            C 0 I 10
s Panthera_tigris.KE721879.1                              5033296 2 -   6340057 ta
i Panthera_tigris.KE721879.1                            C 0 I 10
s Pantholops_hodgsonii.KE114631.1                         1071429 2 -   1292953 ta
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188160312 2 - 188283584 TA
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              3402 2 +     25005 TA
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47517684 2 +  47705337 TA
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 71675 2 -    104429 TA
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   10207 2 +     14967 TA
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 6072 2 -      7628 TA
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    121334 2 -    135482 TA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 I 10
s Perodicticus_ibeanus.k141_117958                          10747 2 -     23713 TA
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           11887 2 +     61070 TA
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       2167 2 +     49596 TA
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4955364 2 -   8017169 ta
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    17219 2 -     36578 AG
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              2847 2 +      8220 TA
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            99467 2 +    112873 TA
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           9318 2 +     21690 TA
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       26007 2 +     44506 TA
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        26220 2 +     67491 TA
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      16459 2 -     98129 TA
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     26060 2 +    147771 TA
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         2695 2 -     43940 TA
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          6778 2 -     55515 TA
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         26132 2 +    152463 TA
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       3940 2 -    119457 TA
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         15855 2 +    134592 TA
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          26442 2 -     75465 TA
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              191055 2 -    373494 TA
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19811702 2 +  19899266 TA
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                3872 2 -      9567 TC
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6852669 2 +  12164890 ta
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coronatus.k141_1353159                         7755 2 +     11805 TA
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           47090 2 +     52369 TA
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         39477 2 -     44753 TA
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            21400 2 +     27322 TA
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       21048 2 -     53241 TA
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         43311 2 -     48185 TA
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           38154 2 +     77221 TA
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            6015 2 -     27784 ta
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        250224 2 -    344369 TA
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Puma_concolor.QAVW01000427.1                          131539944 2 - 161321710 ta
i Puma_concolor.QAVW01000427.1                          C 0 I 10
s Rangifer_tarandus.RanTarSib_scaffold_24239                20412 2 +     68503 TA
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13917567 2 +  90463843 TA
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1792528 2 +   2252614 CA
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                       822 2 -      4338 TA
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15676464 2 -  43202129 ta
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        8377 2 +     34089 TA
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              8317 2 -     60842 TA
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              8411 2 +     67014 TA
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              8388 2 +     60816 TA
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 8325 2 -     76454 TA
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17345112 2 -  30362882 TA
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         24433 2 -     62485 TA
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   39548 2 -    114521 TG
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  104933 2 -    120886 TA
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            23471 2 +    739146 TT
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17769924 2 -  27805282 ta
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2243971 2 +   2842873 ta
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             238741 2 -    276980 TA
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            33149 2 +     62062 TA
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 I 10
s Sus_scrofa.CM000824.4                                 189274921 2 + 218635234 TA
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        18725 2 -  13920577 TA
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                2241 2 +     20549 TA
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               17212 2 +     45698 TA
i Tamandua_tetradactyla.TamTet_scaffold_26877           I 511 C 0
s Tapirus_indicus.TapInd_scaffold_176                      810710 2 +   1148477 TA
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  61352 2 +     99546 TA
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               31295 2 +     42269 TA
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               64604 2 +     65473 TA
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194011845 2 - 194193292 TA
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  138013 2 -    259118 TA
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                   9449 2 +     90398 TA
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16089771 2 +  31416278 TA
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2797675 2 -   3938065 ta
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    9610 2 +     13056 TA
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69317110 2 -  96451834 TA
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                      17 2 +    136657 TA
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 C 0
s Ursus_maritimus.KK498671.1                              6520398 2 +  28682327 TA
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  9312 2 -     20643 TA
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             28847 2 -     33872 TA
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1528147 2 -   2331223 ta
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                144322 2 -    281493 TA
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       131467 2 -    134049 TA
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        219789 2 -    227762 TA
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_256618                      400 2 -      2259 GG
i Zapus_hudsonius.ZapHud_scaffold_256618                C 0 I 1
s Ziphius_cavirostris.ZipCav_flattened_line_60625            1857 2 -     13665 TG
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           4544 0 -      6963 C
e Ochotona_princeps.JH802095.1                            4999348 675 -  23139505 I
e Tolypeutes_matacus.TolMat_scaffold_475685                   382 0 -      3104 C
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Elephantulus_edwardii.JH947210.1                        7830035 1277 +  15467074 I
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Echinops_telfairi.JH980316.1                           22999931 2 -  44670279 I
e Trachypithecus_pileatus.k141_1022309                       5226 0 +     13828 C
e Trachypithecus_phayrei.ctg3                            44662914 0 -  44834318 C
e Trachypithecus_obscurus.k141_1115109                       8130 0 -     28054 C
e Trachypithecus_melamera.k141_699241                        2986 0 -     24393 C
e Trachypithecus_leucocephalus.k141_381681                   3005 0 +     12481 C
e Trachypithecus_laotum.k141_760702                          4719 0 +     14371 C
e Trachypithecus_hatinhensis.k141_504423                     6067 0 -     15592 C
e Trachypithecus_germaini.k141_868450                        3883 0 -     11566 C
e Trachypithecus_geei.k141_670367                           46082 0 -     54611 C
e Trachypithecus_francoisi.k141_768164                       4689 0 -     14244 C
e Trachypithecus_cristatus.k141_1011511                      5261 0 -     12939 C
e Trachypithecus_crepusculus.k141_1588528                   23360 0 -     32910 C
e Trachypithecus_auratus.k141_738098                        29800 0 +     38948 C
e Semnopithecus_vetulus.k141_1143185                        16479 0 +     30600 C
e Semnopithecus_schistaceus.k141_387461                     33457 0 +     42640 C
e Semnopithecus_priam.k141_410937                           40312 0 +     46263 C
e Semnopithecus_johnii.k141_785014                         121532 0 +    130994 C
e Semnopithecus_hypoleucos.k141_761524                      11528 0 +     20762 C
e Semnopithecus_entellus.k141_1572367                        6153 0 +     15331 C
e Rhinopithecus_strykeri.ctg4                            44859307 0 -  45163003 C
e Rhinopithecus_bieti.k119_554384                            2917 0 -     17045 C
e Pygathrix_nigripes_a.k141_101123                             8537 0 +     18040 C
e Pygathrix_nigripes_b.ctg79                                 6809148 0 +   6970761 C
e Pygathrix_cinerea.k141_374971                             32651 0 +     56732 C
e Propithecus_coquerelli.NW_012147863.1                     21633 0 -     30946 C
e Presbytis_mitrata.k141_860013                              8661 0 +     14865 C
e Presbytis_comata.k141_672698                               8546 0 -     15069 C
e Pithecia_vanzolinii.k141_831006                           15424 0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514 0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521 0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292 0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093 0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038 0 +     78826 C
e Pithecia_albicans.k141_991845                             45662 0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000036.1               26743271 0 +  26888534 C
e Piliocolobus_kirkii.k141_929665                            4788 0 +      7694 C
e Piliocolobus_gordonorum.k141_1270531                       5421 0 -     17985 C
e Piliocolobus_badius.k141_1987485                           4802 0 -      5908 C
e Octodon_degus.JH651621.1                                3687420 1881 +  10294119 I
e Nasalis_larvatus.k141_153429                              11264 0 +     48152 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     91920 1922 -    117718 I
e Hystrix_cristata.HysCri_scaffold_50788                     7688 1865 +     22540 I
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 32592 1717 -     67205 I
e Colobus_polykomos.k141_1406057                            19335 0 +     23629 C
e Colobus_guereza.LG08                                  147667351 0 + 156195979 C
e Colobus_angolensis.KN985967.1                          10889423 0 +  10971483 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               17450 56 +    209709 TT-T---TA--T----A-GCT-----TTGAACAAG-T-TGAATTATTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-G---GA--GCCA
s Acinonyx_jubatus.LLWD01000356.1                         2039431 35 +   3721120 ----------------------------------------------------ag----aaCTGC-C-T-G--GAATTCTCTGTTAAAC-T----AGAATCT
i Acinonyx_jubatus.LLWD01000356.1                       I 10 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    117668 57 -    189883 TT-T---TA--T----A-ATA-----CTGAATAAA-C-TGAACTGTTAA-CCAG-----ACTAC-C-TTG-GGG-----------AAT-G---AA--GTCT
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10663106 58 +  23371972 TT-T---TG--T----AAACA-----TTGAGCAAG-C-TGAATTGTGAA-TCAG-A---ACTGA-C-T-G--GT-----------GAC-T----AGAgtcc
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 I 259
s Ailurus_fulgens.LNAC01000003.1                          7099903 58 -  16596857 tt-t---ta--t----aaaca-----ttgagCAAG-C-TGAAGTGTGAA-TCAG-A---GCTGC-C-T-G--GT-----------AAC-T----ACAATGC
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_141108                    662  4 -      7259 TA-T---T---------------------------------------------------------------------------------------------
i Allactaga_bullata.AllBul_scaffold_141108              N 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   5323 56 -     60446 TT-T---TA--T----A-GCT-----TTGAACAAG-T-TGAATTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-G---GA--GCCC
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         6040 56 -     29318 TT-T---TA--T----A-GCT-----TTGAACAAG-T-TGAATTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-G---GA--GCCC
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         4978 56 +     38766 TT-T---TA--T----A-GCT-----TTGAACAAG-C-TGAATTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-G---GA--GCCC
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          5934 56 -     80423 TT-T---TA--T----A-GCT-----TTGAACAAG-C-TGAATTGTTAA-CTAG-----ACTGC-C-CAG--GA-----------AAT-G---GA--GCCC
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                               906 56 +     19852 TT-A---TA--T----A-GTA-----TTGAACAAG-C-TGAATTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-A---GA--GTCC
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                3162 56 -     12443 TT-A---TA--T----A-GTA-----TTGAACAAG-C-TGAATTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-A---GA--GTCC
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                              461 56 +      5070 TT-A---TA--T----A-GTA-----TTAAACAAG-C-TGAATTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-A---GA--GTCC
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                  206 56 -      1641 TT-A---TA--T----A-GTA-----TTGAACAAG-C-TGAATTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-A---GA--GTCC
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          2945 56 -     24210 TT-A---TA--T----A-GTA-----TTGAACAAG-C-TGAATTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-A---GA--GTCC
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           29527 56 -     30219 TT-A---TA--T----A-GTA-----TTGAACAAG-C-TGAATTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-A---GA--GTCC
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_405616                              5363 56 +     16794 TT-A---TA--T----A-GTA-----TTGAACAAG-C-TGAATTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-A---GA--GTCC
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                             495 56 -      1470 TT-A---TA--T----A-GTA-----TTGAACAAG-C-TGAATTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-A---GA--GTCC
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             4640 56 -      9835 TT-A---TA--T----A-GTA-----TTGAACAAG-C-TGAATTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-A---GA--GTCC
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3525422 47 +   4113121 TT-T---TA--T----A-CTA-----TTGAACAAG-A-TGAATTATTAA-CCaa-----attgc-c-t-a-gag-----------a---------------
i Ammotragus_lervia.NIVO01013474.1                      C 0 I 4
s Anoura_caudifer.AnoCau_scaffold_422                      392454 55 -    631301 TT-T---TA--T----A-ATA-----TTGAGCAAG-C-TGAATT-GTTG-TTGG-----ACTGC-C-T-G--AG-----------GAA-T-AG-A--GTCC
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             2853 47 +     55446 TT-T---TA--T----A-ATA-----TTGAGCAAG-A-TGAATTATTAA-CCAA-----ATTGC-C-T-G-GAG-----------A---------------
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 I 4
s Aotus_azarae.k141_3170768                                 66253 56 +     78111 TT-G---TA--T----A-ATA-----TTGAACAAG-C-TAAATTGTTA-ACTAG-----ACTGC-C-CAG--GG-----------AAT-A---GA--GTCC
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            9199 56 +     22701 TT-G---TA--T----A-ATA-----TTGAACAAG-C-TAAATTGTTA-ACTAG-----ACTGC-C-CAG--GG-----------AAT-A---GA--GTCC
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5753157 56 +   9889416 TT-G---TA--T----A-ATA-----TTGAACAAG-C-TAAATTGTTA-ACTAG-----ACTGC-C-CAG--GG-----------AAT-A---GA--GTCC
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             9755 56 -    104377 TT-G---TA--T----A-ATA-----TTGAACAAG-T-TAAATTGTTA-ACTAG-----ACTGC-C-CAG--GG-----------AAT-A---CA--GTCC
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               9762 56 +     23246 TT-G---TA--T----A-ATA-----TTGAACAAG-T-TAAATTGTTA-ACTAG-----ACTGC-C-CAG--GG-----------AAT-A---CA--GTCC
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     2292 53 +     11424 TT-T---TA--T----A-ACA-----TTCAACAAG-T-TGAACTGTTA----AA-----ATGTC-C-TGG--AG-----------ATG-G---GA--GTCT
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        6375 52 +      9265 TT-T---TA--T----A-TAA-----TTGAACAAG-G-TGAATTGTT-----CA-----ACTGC-T-TGG--GG-----------AAG-A---GA--GTCT
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                10879 55 -     29036 TT-T---TA--T----A-ATA-----CTGAGCAAG-C-TGAATT-ATTA-TCGA-----ACTGC-C-T-G--GG-----------TAA-T-AG-A--GTCG
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9543049 56 +  39197703 TT-A---TA--T----A-ATA-----TTGAACAAG-C-TGAATTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-A---GA--GTCC
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             64322 56 +     85812 TT-A---TA--T----A-ATA-----TTGAACAAG-C-TGAATTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-A---GA--GTCC
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                15335 56 +     89302 TT-A---TA--T----A-ATA-----TTGAACAAG-C-TGAATTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-A---GA--GTCC
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             19836 56 -     58268 TT-A---TA--T----A-ATA-----TTGAACAAG-C-TGAATTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-A---GA--GTCC
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             67830 56 +    119057 TT-A---TA--T----A-ATA-----TTGAACAAG-C-TGAATTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-A---GA--GTCC
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               9799 56 -     25888 TT-A---TA--T----A-ATA-----TTGAACAAG-C-TGAATTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-A---GA--GTCC
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                10850 56 -     16375 TT-T---TA--T----A-TAA-----TCAAACAAG-G-GTAATTGTTAA-CCAG-----ACTGC-C-TGG--GG-----------AAT-G---AA--GCCT
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               4466 56 +      6337 TT-T---TA--T----A-TAA-----TCAAACAAG-G-GGAATTGTTAA-CCAG-----ACTGC-C-TGG--GG-----------AAT-G---AA--GCCT
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26383901 56 +  51448160 TT-T---TA--T----A-ACA-----TTGAGCAAG-A-TGAATTATTAA-CCAG-----ATTGC-C-T-G-GAG-----------AAT-A--G-A--GTTC
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        9074 56 -     13118 TT-T---TA--T----A-ACA-----TTGAGCAAG-A-TGAATTATTAA-CCAG-----ATTGC-C-T-G-GAG-----------AAT-A--G-A--GTTC
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   47884 47 -     72089 TT-T---TA--T----A-ATA-----TTGAGCAAG-A-TGAATTATTAA-CCAA-----ATTGC-C-T-A-GAG-----------A---------------
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 I 4
s Bison_bison.KN264915.1                                   302028 47 -   6870073 tt-t---ta--t----a-ata-----ttgagtGAG-A-TGAATTATTAA-ccaa-----attgc-c-t-g-gag-----------a---------------
i Bison_bison.KN264915.1                                C 0 I 4
s Bos_indicus.CM003021.1                                 22956126 47 + 161108492 tt-t---ta--t----a-ata-----ttgagtGAG-A-TGAATTATTAA-ccaa-----attgc-c-t-g-gag-----------a---------------
i Bos_indicus.CM003021.1                                C 0 I 4
s Bos_mutus.JH883513.1                                     418391 47 +    998990 tt-t---ta--t----a-ata-----ttgagtgAG-A-TGAATTATTAA-ccaa-----attgc-c-t-g-gag-----------a---------------
i Bos_mutus.JH883513.1                                  C 0 I 4
s Bos_taurus.CM000177.6                                  22664780 47 + 158972876 tt-t---ta--t----a-ata-----ttgagtGAG-A-TGAATTATTAA-ccaa-----attgc-c-t-g-gag-----------a---------------
i Bos_taurus.CM000177.6                                 C 0 I 4
s Bubalus_bubalis.KI419065.1                               674543 47 +   1914593 tt-t---ta--t----a-ata-----ttgagcAAG-A-TGAATTATTAA-ccaa-----attgc-c-t-g-gag-----------a---------------
i Bubalus_bubalis.KI419065.1                            C 0 I 4
s Cacajao_ayresi.k141_724503                               117702 56 -    171031 TT-A---TG--T----A-ATA-----TTGAACAAG-C-TGAATTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-A---GA--ATCC
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 16722 56 +    125063 TT-A---TG--T----A-ATA-----TTGAACAAG-C-TGAATTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-A---GA--ATCC
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                18769 56 -    216513 TT-A---TG--T----A-ATA-----TTGAACAAG-C-TGAATTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-A---GA--ATCC
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       11312 56 -    134917 TT-A---TG--T----A-ATA-----TTGAACAAG-C-TGAATTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-A---GA--ATCC
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3223039 62 -   8989139 tt-t---ttttttttac-aca-----ttgaGCAAG-C-TAAATTGTTAA-CCAG-----ACTGC-C-T-G--GG-----------GAA-T-AG-A--GTCC
i Camelus_bactrianus.KN276303.1                         C 0 I 13
s Camelus_dromedarius.KN271192.1                           400741 61 -  15254737 tt-t---ttt-ttttac-aca-----ttgaGCAAG-C-TAAATTGTTAA-CCAG-----ACTGC-C-T-G--GG-----------GAA-T-AG-A--GTCC
i Camelus_dromedarius.KN271192.1                        C 0 I 13
s Camelus_ferus.KB016973.1                                2976477 62 +   6889770 tt-t---ttttttttac-aca-----ttgaGCAAG-C-TAAATTGTTAA-CCAG-----ACTGC-C-T-G--GG-----------GAA-T-AG-A--GTCC
i Camelus_ferus.KB016973.1                              C 0 I 13
s CanFam4.chr31                                          11526244 58 +  39901454 TT-T---TA--T----AAACA-----TTGAGCAAG-C-TGAATTGTGAA-CCAG-A---ACTGC-C-T-G--GT-----------GGC-T----AGAGTCC
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   21218 58 +     87036 TT-T---TA--T----AAACA-----TTGAGCAAG-C-TGAATTGTGAA-CCAG-A---ACTGC-C-T-G--GT-----------GGC-T----AGAGTCC
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11272927 58 -  35597290 tt-t---ta--t----aaaca-----ttgagCAAG-C-TGAATTGTGAA-CCAG-A---ACTGC-C-T-G--GT-----------GGC-T----AGAGTCC
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11095638 58 +  39895921 tt-t---ta--t----aaaca-----ttgagCAAG-C-TGAATTGTGAA-CCAG-A---ACTGC-C-T-G--GT-----------GGC-T----AGAGTCC
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16462423 58 -  44759192 tt-t---ta--t----aaaca-----ttgagCAAG-C-TGAATTGTGAA-CCAG-A---ACTGC-C-T-G--GT-----------GGC-T----AGAGTCC
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21330502 47 + 157394656 tt-t---ta--t----a-ata-----ttgaacAAG-A-TGAATTATTAA-CCaa-----attgc-c-t-a-gag-----------a---------------
i Capra_aegagrus.CM003214.1                             C 0 I 4
s Capra_hircus.CM004562.1                               135711719 47 - 157403528 tt-t---ta--t----a-ata-----ttgaacAAG-A-TGAATTATTAA-CCaa-----attgc-c-t-a-gag-----------a---------------
i Capra_hircus.CM004562.1                               C 0 I 4
s Carlito_syrichta.NW_007248099.1                          313440 56 +    345090 TT-T---TG--T----A-ACA-----TCGAACAAG-C-TGAATTGTTAA-GCAG-----ATTAC-C-TGG--GG-----------AAT-G---AA--ATCC
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               61661 47 +     67245 TT-T---CA--T----A-ATA-----TTGAGCAAG-C-TGAATT-GTTA-TCAG-----ACTGC-C-T-G--AG-----------GAA-------------
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 I 6
s Castor_canadensis.CasCan_scaffold_417865                     85 56 -       402 CT-T---TA--T----A-ACA-----TTGAACAAG-C-TGAATTATTAA-CCAG-----ACTAC-A-TGG--GT-----------AAT-G---GA--ATAT
i Castor_canadensis.CasCan_scaffold_417865              C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   162564 55 -    276539 T--T---TA--T----A-ACA-----CTGAGCAAG-G-TAAATCATTAA-CCAG-----ACTGC-C-T-G--GG-----------GAA-T----AAAGCCC
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 I 8
s Cavia_aperea.AVPZ01000278.1                            15789573 39 -  24422027 TT-T---TA--T----A-GTG-----TTGTACAGG-C-TGAACTGTTAA-CCTG-----ACTA--------------------------------------
i Cavia_aperea.AVPZ01000278.1                           C 0 I 17
s Cavia_porcellus.DS562889.1                             15801512 39 -  24440124 TT-T---TA--T----A-GTG-----TTGTACAGG-C-TGAACTGTTAA-CCTG-----ACTA--------------------------------------
i Cavia_porcellus.DS562889.1                            C 0 I 17
s Cavia_tschudii.CavTsc_scaffold_488                       179684 39 +    436027 TT-T---TA--T----A-GTG-----TTGTACAGG-C-TGAACTGTTAA-CCTG-----ACTA--------------------------------------
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 I 17
s Cebus_albifrons.Contig22                               18894536 42 -  29618158 -------TA--T----A-ATA-----TTGAACAAG-C-TAAATTGTTA--CTAG-----ACTGC-C-CAG--GG---------------------------
i Cebus_albifrons.Contig22                              I 3 I 905
s Cebus_olivaceus.k141_93739                                12077 55 -     26817 TT-A---TA--T----A-ATA-----TTGAACAAG-C-TAAATTGTTA--CTAG-----ACTGC-C-CAG--GG-----------AAT-A---GA--GTCC
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                16321 55 +     25043 TT-A---TA--T----A-ATA-----TTGAACAAG-C-TAAATTGTTA--CTAG-----ACTGC-C-CAG--GG-----------AAT-A---GA--GTCC
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                        12455 56 +     21754 TT-T---TG--T----A-ACA-----TTGAACAAG-C-TGAATTGTTAA-GCAG-----ACTAC-C-TGG--GG-----------AAT-G---AA--ATCC
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4367476 56 +   7569818 TT-T---CA--T----A-ACT-----TTGAGCAAG-C-TGAATCTTTAA-CCAG-----ACTGC-C-T-G--GG-----------GAA-T----AGAGTCC
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         7233 56 -      9338 TT-T---CA--T----A-ACT-----TTGAGCAAG-C-TGAATCTTTAA-CCAG-----ACTGC-C-T-G--GG-----------GAA-T----AGAGTCC
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6559264 56 +   6739814 TT-T---TA--T----A-GCT-----TTGAACAAG-T-TGAGTTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-G---CA--GCCC
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      30741 56 +     60454 TT-T---TA--T----A-GCT-----TTGAACAAG-T-TGAGTTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-G---CA--GCCC
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          5945 56 -     21101 TT-T---TA--T----A-GCT-----TTGAACAAG-T-TGAGTTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-G---CA--GCCC
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         63255 56 -    107033 TT-T---TA--T----A-GCT-----TTGAACAAG-T-TGAGTTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-G---CA--GCCC
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        6118 56 -     17608 TT-T---TA--T----A-GCT-----TTGAACAAG-T-TGAATTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-G---GA--GCCC
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          3283 56 +     45019 TT-T---TA--T----A-GCT-----TTGAACAAG-T-TGAATTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-G---GA--GCCC
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           3343 56 +     15177 TT-T---TA--T----A-GCT-----TTGAACAAG-T-TGAATTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-G---GA--GCCC
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          6165 56 +     16677 TT-T---TA--T----A-GCT-----TTGAACAAG-T-TGAATTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-G---GA--GCCC
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           28355 56 +     35983 TT-T---TA--T----A-GCT-----TTGAACAAG-T-TGAATTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-G---GA--GCCC
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11994886 56 +  12117833 TT-T---TA--T----A-GCT-----TTGAACAAG-T-TGAATTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-G---GA--GCCC
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46481647 56 +  46592721 TT-T---TA--T----A-GCT-----TTGAACAAG-T-TGAATTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-G---GA--GCCT
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      45196 56 -     45581 TT-T---TA--T----A-GCT-----TTGAACAAG-T-TGAATTGTTAA-TTAG-----ACTGC-C-CAG--GG-----------AAT-G---GA--GCCC
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       6179 56 +     35577 TT-T---TA--T----A-GCT-----TTGAACAAG-T-TGAATTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-G---GA--GCCC
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        5973 56 -     25661 TT-T---TA--T----A-GCT-----TTGAACAAG-T-TGAATTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-G---GA--GCCC
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        5930 56 -     17744 TT-T---TA--T----A-GCT-----TTGAACAAG-T-TGAATTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-G---GA--GCCT
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        25514 56 +     37128 TT-T---TA--T----A-GCT-----TTGAACAAG-T-TGAATTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-G---GA--GCCC
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           63075 56 -     68416 TT-T---TA--T----A-TAA-----TTGAACAAG-G-GGAATTGTTAA-CCAG-----ACTGC-C-TGG--GG-----------AAT-G---AA--GTCT
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                           12181 56 +     13308 TT-T---TA--T----A-TAA-----TTGAACAAG-G-GGAATTGTTAA-CCAG-----ACTGC-C-TAG--GG-----------AAT-G---AA--GTCT
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             9360 56 -     18223 TT-A---TA--T----A-ATA-----TTGAACAAG-C-TAAATTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-A---GA--GTCC
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              1099 56 +    188999 TT-G---TA--T----A-ATA-----TTGAACAAG-C-TAAATTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-A---GA--GTCC
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           45397 56 +     57117 TT-A---TA--T----A-ATA-----TTGAACAAG-C-TAAATTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-A---GA--GTCC
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          50077 56 +     54541 TT-A---TA--T----A-ATA-----TTGAACAAG-C-TAAATTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-A---GA--GTCC
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15964257 40 +  43084221 TT-T---CA--C----A-ATA-----TTGAACAAGCC-TGAACTGTTAA-CCTG-----ACTG--------------------------------------
i Chinchilla_lanigera.JH721867.1                        C 0 I 17
s Chiropotes_israelita.k141_1189915                         74881 56 +    196370 TT-A---TA--T----A-ATA-----TTGAACAAG-C-TGAATTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-A---GA--ATCC
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          19062 56 +     40510 TT-A---TA--T----A-ATA-----TTGAACAAG-C-TGAATTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-A---GA--ATCC
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15143699 56 -  15256731 TT-T---TA--T----G-GCT-----TTGAACAAG-T-TGAATTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-G---GA--GCCC
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      38163 56 -     53260 TT-T---TA--T----A-GCT-----TTGAACAAG-T-TAAATTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-G---GA--GCCC
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101148722 56 + 101219884 TT-T---TA--T----A-GCT-----TTGAACAAG-T-TGAATTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-G---GA--GCCC
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                18591 51 -     21363 -----------T----A-GCT-----TTGAACAGG-C-TGAATTGTTAA-CCAG-----ACTGC-CTA-A--AG-----------AAT-G---GA--GTGC
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           763895 51 +    964067 -----------T----A-GCT-----TTGAACAGG-C-TGAATTGTTAA-CCAG-----ACTGC-CTA-A--AG-----------AAT-G---GA--GTGC
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_629495              2133 30 -      3120 TT-T---TT--A----A-AAC-----TTGAAGA-A-T-TTAATTGTTGT----------------------------------------------------
i Chrysochloris_asiatica.ChrAsi_scaffold_629495         C 0 I 19
s Condylura_cristata.JH655880.1                          60622097 55 +  78930452 TT-T---TA--T----G-ACA-----ACAAACAAG-T-TGAATTG-CTA-ACAA-----GCTGT-T-T-G--GG-------G--AAGA-G----A--GTCC
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         2120 41 -      5782 AC-T---TA--T----A-ACG-----TGGAGCAAG-C-TGAATTGTTAA-ACAA-----CCTGC-T-----------------------------------
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 282545 56 -    399297 TT-T---TA--T----A-ATA-----CTGAACAAG-C-TGAACCATTAA-CCAG-----ACTGC-C-TGG--AG-----------AAT-G---GA--GTCT
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53034913 56 +  72327488 TT-T---TA--T----A-ATA-----CTGACCAGG-C-TAAGCTGTTAC-CCAG-----ACTGC-C-TGG--AG-----------AAT-G---GA--ATCT
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              1506 53 -     22648 TT-T---TT--T----A-ACATTACGCTAACCATG-T-T-----TGTTA-TTCA-----ACTGT-C---G--AG-----------AGT-A----T--ATCT
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 I 3
s Cryptoprocta_ferox.CryFer_flattened_line_19014            57428 24 -     70449 ----------------------------------------------------AG-A---ACTGT-C-T-G--GT-----------GAT-T----AGAATTC
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 10 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  214267  8 -    956709 TT-T---TA--T----A-A----------------------------------------------------------------------------------
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                20745 39 +     26546 TT-T---TA--C----A-ATA-----TTGTACAAG-C-TGAACTGTTAA-CCTG-----ACTG--------------------------------------
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 I 17
s Dasyprocta_punctata.DasPun_flattened_line_634             61885 39 -    236241 TT-T---TA--T----A-ATA-----TTGTACAAG-C-TGAACTGTTAA-TCTG-----ACTG--------------------------------------
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 I 17
s Dasypus_novemcinctus.JH568778.1                          185568 50 -   6883506 -----------T----A-ACT-----TTGAACAGG-C-CGAATTGTTAA-CCAG-----ACTGC-CTA-A--AG-----------AA--G---GA--ACAT
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16849010 56 +  31942871 TT-T---TA--C----A-TAA-----TTGAACAAG-G-TGAATTGTTAG-CCAG-----ACTGC-C-TGG--GG-----------AAT-G---GA--GTCT
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80040524 56 -  96802777 TT-T---GA--T----A-ACA-----TGGAGCAAG-A-TGAATTGTTAA-CCAG-----ACTGC-C-T-G-GAG-----------AAT-A--G-A--GTTC
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18701088 55 -  18957592 TT-T---TA--T----A-ATA-----CTGAGCAAG-C-TGAATT-GTTA-TCAG-----ACTGC-C-T-G--GG-----------GAA-T-GG-A--GTCT
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 326123 56 +    993696 TT-T---CA--T----A-ACC-----TTGAGCAAG-C-TGAATCTTTAA-CCAG-----ACTGC-C-T-G--GG-----------GAA-T----AGAGTCC
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   6764 56 +    151128 TT-T---CA--T----A-ACT-----TTGAGCAAG-C-TGAATCTTTAA-CCAG-----ACTGC-C-T-G--GG-----------GAA-T----AGAGTCC
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   159520 39 +    228994 TT-T---CA--T----A-GTA-----CTGAACACA-C-TGAACTGTTAA-CCTG-----ACTG--------------------------------------
i Dinomys_branickii.DinBra_scaffold_1996                C 0 I 17
s Dipodomys_ordii.KN672545.1                              3660077 56 +   4240102 TT-T---TA--T----A-ACA-----TTGAACAAG-T-TGAATTATTAA-CCAG-----ATTGC-C-TGA--AG-----------AAT-G---AG--ATAt
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  2425 56 -     11986 TT-T---TA--T----A-ACA-----TTGAACAAG-T-TGAATTATTAA-CCAG-----ATTGC-C-TGA--AG-----------AAT-G---AG--ATAT
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                39849 39 -     73477 TT-T---TA--T----A-GTA-----TTGTACAAG-C-TGAACTGTTAA-CTTG-----ACTA--------------------------------------
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 I 17
s Elaphurus_davidianus.JRFZ01086400.1                     1496100 47 +   1727528 tt-t---ta--t----a-ata-----ttgagcAAG-A-TGAATTATTAA-Ccaa-----attgc-c-t-g-gag-----------a---------------
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 I 4
s Ellobius_lutescens.LOEQ01003611.1                        243710 56 -    369425 tt-t---ta--t----a-ata-----ctgaCCAAG-C-TAAACTGTTAA-CCAG-----AGTGA-G-TAA--GG-----------AAT-A---CA--GTCT
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Enhydra_lutris.KZ291749.1                              85877375 58 +  99434291 tt-t---ta--t----aaaca-----ttgagCGAG-C-TGAATTGTGAA-TCAG-A---ACTGC-C-T-G--GT-----------GAG-T----ACAATAC
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4708844 56 +   6522550 TT-T---CA--T----A-TCA-----TCAAGCAAG-C-TGAATTGTTAA-CCAG-----ACTGC-C-T-G--GG-----------GAA-T-AA-A--GTCC
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5856489 56 -   7175178 TT-T---CA--T----A-ACA-----TGGAGCAAG-C-TGAATTGTTAA-CCAG-----ACTAC-C-T-A--GG-----------AAA-T----AGAATCC
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13354989 56 +  41866177 TT-T---CA--T----A-ACA-----TGGAGCAAG-C-TGAATTGTTAA-CCAG-----ACTGC-C-T-A--GG-----------AAA-T----AGAATCC
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          16479 56 +     92910 TT-T---CA--T----A-ACA-----TGGAGCAAG-C-TGAATTGTTAA-CCAG-----ACTGC-C-T-A--GG-----------AAA-T----AGAATCC
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11541229 56 +  16010500 tt-t---ta--t----a-aca-----TTGAATAAG-C-TGAACTACTAA-CCAG-----AATACCC-A-G--GG-----------AAT-T--G-A--GCAC
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48780732 56 -  48907691 TT-T---TA--T----A-GCT-----TTGAACAAG-T-TGAATTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-G---GA--GCCC
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          318744 56 +    330699 TT-T---TA--T----A-ACA-----TTGAGCAAG-A-TGAATTATTAA-CCAG-----ATTGC-C-T-G-GAG-----------AAT-A--G-A--GTTC
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             65201 56 +     89355 TT-T---TA--T----A-ACA-----TTGAGCAAG-A-TGAATTATTAA-CCAG-----ATTGC-C-T-G-GAG-----------AAT-A--G-A--GTTC
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_59549                                257 56 +      1101 TT-T---TA--T----A-TAA-----TTGAACAAG-G-GGAATTGTTAA-CCAG-----ACTGC-C-TGG--GG-----------AAT-A---AA--GTCT
i Eulemur_albifrons.k141_59549                          n 56 I 47
s Eulemur_collaris.k141_1015201                              2425 56 -      4292 TT-T---TA--T----A-TAA-----TCGAACAAG-G-GGAATTGTTAA-CCAG-----ACTGC-C-TGG--GG-----------AAT-A---AA--GTCT
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            15558 56 +     36558 TT-T---TA--T----A-TAA-----TCGAACAAG-G-GGAATTGTTAA-CCAG-----ACTGC-C-TGG--AG-----------AAT-A---AA--GTCT
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            11883 56 +     60246 TT-T---TA--T----A-TAA-----TCGAACAAG-G-GGAATTGTTAA-CCAG-----ACTGC-C-TGG--GG-----------AAT-A---AA--GTCT
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                15366 56 +    109717 TT-T---TA--T----A-TAA-----TCGAACAAG-G-GGAATTGTTAA-CCAG-----ACTGC-C-TGG--GG-----------AAT-A---AA--GTCT
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 3351 56 -     19505 TT-T---TA--T----A-TAA-----TCGAACAAG-G-GGAATTGTTAA-CCAG-----ACTGC-C-TGG--GG-----------AAT-A---AA--GTCT
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                20023 56 +     27497 TT-T---TA--T----A-TAA-----TCGAACAAG-G-GGAATTGTTAA-CCAG-----ACTGC-C-TGG--GG-----------AAT-A---AA--GTCT
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           22479 56 +     26808 TT-T---TA--T----A-TAA-----TCGAACAAG-G-GGAATTGTTAA-CCAG-----ACTGC-C-TGG--GG-----------AAT-A---AA--GTCT
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                37214 56 +     46535 TT-T---TA--T----A-TAG-----TCGAACAAG-G-GGAATTGTTAA-CCAG-----ACTGC-C-TGG--GG-----------AAT-A---AA--GTCT
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              19953 56 -     29447 TT-T---TA--T----A-TAA-----TCGAACAAG-G-GGAATTGTTAA-CCAG-----ACTGC-C-TGG--GG-----------AAT-A---AA--GTCT
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.AANG03133801.1                                  470 35 -       736 ----------------------------------------------------ag----aactgc-c-t-g--gaattctctgttAAAC-T----AGAATCT
i Felis_catus.AANG03133801.1                            I 10 C 0
s Felis_catus_fca126.CM031420.1                         129285826 35 - 158578461 ----------------------------------------------------ag----aactgc-c-t-g--gaattctctgttAAAC-T----AGAATCT
i Felis_catus_fca126.CM031420.1                         I 10 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 26925 35 +     52776 ----------------------------------------------------AG-A---ACTGC-C-T-G--GAATTCTCTGTTAAAC-T----AGAATCT
i Felis_nigripes.FelNig_flattened_line_8080             I 10 C 0
s Fukomys_damarensis.KN123630.1                          13896035 39 -  19261668 tt-g---ca--t----a-aaa-----tgaaaaaga-c-taaGCAGTTTA-AATG-----GTTG--------------------------------------
i Fukomys_damarensis.KN123630.1                         C 0 I 13
s Galago_moholi.ctg555                                     215216 54 -    847004 TT-T---TA--T----A-TAA-----TTGAGCAAG-G-TGAATTGTTTA-TCAG-----ACTGC-T-TGG--GG-----------AAT-A---CA--GT--
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           17577 54 -     43889 TT-T---TA--T----A-TAA-----TTGAGCAAG-G-TGAATTGTTTA-TCAG-----ACTGC-T-TGG--GG-----------AAT-A---CA--GT--
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          14720 56 +     27357 TT-T---TA--T----A-TAA-----TTGAGCAAG-G-TGAATTGTTTA-TCAG-----ACTGC-T-TGG--GG-----------AAT-A---GA--GTCT
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               159461 56 +    324696 CT-T---TA--T----A-ACA-----TCGAACAAG-C-TGAATTGTTAA-CCAG-----ACTGC-C-TGG--GG-----------AAT-G---GA--GTCC
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    185898 47 -    189561 TT-T---TA--T----A-ATA-----CTGAGTAAG-A-TGAATTATTAA-Ccaa-----attgc-c-t-g-gag-----------a---------------
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 I 4
s Glis_glis.GliGli_scaffold_79770                           16356 56 -     18683 CT-T---TG--T----A-ACA-----CTGAACAAG-T-TGAATTGTTAA-CCAG-----GCTGC-C-TGG--AG-----------AAT-G---AA--GTCT
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               9148 56 -     14630 TT-T---TA--T----A-GCT-----TTGAACAAG-T-TGAATTGTTAA-CTAG-----TCTGC-C-CAG--GG-----------AAT-G---GA--GCCC
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119656248 56 - 195582420 TT-T---TA--T----A-GCT-----TTGAACAAG-T-TGAATTGTTAA-CTAG-----TCTGC-C-CAG--GG-----------AAT-G---GA--GCCC
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   79673 56 +    118900 TT-T---TG--T----A-ACA-----TTGAACAAG-T-TGAATTGTTAA-TCAG-----GCTGC-T-TAG--AG-----------AAT-G---GA--GTCT
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         5945 56 +     10286 TT-T---TA--T----A-TAA-----TCAAACAAG-G-GGAATTGTTAA-CCAG-----ACTGC-C-TGG--GG-----------AAT-T---AA--GTCT
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             4423 56 -     11661 TT-T---TA--T----A-TAA-----TCAAACAAG-G-GGAATTGTTAA-CCAG-----ACTGC-C-TGG--GG-----------AAT-T---AA--GTCT
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             9750 56 +     56096 TT-T---TA--T----A-TAA-----TCAAACAAG-G-GGAATTGTTAA-CCAG-----ACTGC-C-TGG--GG-----------AAT-T---AA--GTCT
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        32999 56 -     42470 TT-T---TA--T----A-TAA-----TCAAACAAG-G-GGAATTGTTAA-CCAG-----ACTGC-C-TGG--GG-----------AAT-T---AA--GTCT
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        49622 56 -     54384 TT-T---TA--T----A-TAA-----TCAAACAAG-G-GGAATTGTTAA-CCAG-----ACTGC-C-TGG--GG-----------AAT-T---AA--GTCT
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              22569 24 +     53719 ----------------------------------------------------AG-A---ACTGC-C-T-A--GT-----------AAT-T----AGTATCC
i Helogale_parvula.HelPar_flattened_line_22962          I 10 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                32769 47 -     91191 TT-T---TA--T----A-ATA-----TTGAACAAG-A-TGAATTATTAA-CCAA-----ATTGC-C-T-A-GAG-----------A---------------
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 I 4
s Heterocephalus_glaber.JH602058.1                        2560534 17 +  31725842 TT-C---TC--T----A-ATG-----CTGAACA--------------------------------------------------------------------
i Heterocephalus_glaber.JH602058.1                      C 0 I 27
s Heterohyrax_brucei.HetBruBak_scaffold_25354               62769 31 +     73687 TT-T---TT--C----A-ATC-----TTTGACAAG-C-TAAGTTCTTAT----------------------------------------------------
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 I 20
s Hippopotamus_amphibius.HipAmp_scaffold_1308              150527 56 +    277961 TT-T---TA--T----A-ATA-----TTGAGCAAG-A-TGAATTATTAA-TCAG-----ACTGC-C-T-G-GAG-----------AAT-A--G-A--GTCC
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      282934 49 -    477199 ----------------T-ATA-----TGGAACAAG-C-TGAATTGTTAA-CCAG-----CCTGC-T---G--GG-----------GAA-T-AG-A--GTCC
i Hipposideros_armiger.JXIK01001085.1                   I 6 I 32
s Hipposideros_galeritus.HipGal_scaffold_52959                704 49 +     26078 ----------------T-ACA-----TGGAACAAG-A-TGAATTGTTAA-CCAG-----CCTGC-T---G--GG-----------GAA-T-AG-A--GTCC
i Hipposideros_galeritus.HipGal_scaffold_52959          I 14 I 32
s Hoolock_leuconedys.ctg903                                    13161 56 -     61166 TT-T---TA--T----A-GCT-----TTGAACAAG-T-TGAATTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-C---GA--GCCA
i Hoolock_leuconedys.ctg903                                I 338 I 2429
s Hyaena_hyaena.HyaHya_flattened_line_20729                 23037 24 -     67322 ----------------------------------------------------AG-A---ACTGC-C-T-G--GT-----------GAC-T----AGAATCC
i Hyaena_hyaena.HyaHya_flattened_line_20729             I 10 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           21137 39 -    119109 TT-T---TA--T----A-ATA-----TTGTACAAG-C-TGAAATGTTAA-CCTG-----ACTA--------------------------------------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 I 17
s Hylobates_abbotti.k141_1816750                             1634 56 +      3202 TG-T---TA--T----A-GCT-----TTGAACAAG-T-TGAATTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-C---GA--GCCA
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1633646                              1604 56 -      2102 TG-T---TA--T----A-GCT-----TTGAACAAG-T-TGAATTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-C---GA--GCCA
i Hylobates_agilis.k141_1633646                         C 0 C 0
s Hylobates_klossii.k141_468230                              3121 56 +      5464 TG-T---TA--T----A-GCT-----TTGAACAAG-T-TGAATTGTCAA-CTAG-----ACTGC-C-CAA--GG-----------AAT-C---GA--GCCA
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14628469 56 -  25970782 TG-T---TA--T----A-GCT-----TTGAACAAG-T-TGAATTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-C---GA--GCCA
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            1020 56 +      4161 TG-T---TA--T----A-GCT-----TTGAACAAG-T-TGAATTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-C---GA--GCCA
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             37330 56 -     60944 TG-T---TA--T----A-GCT-----TTGAACAAG-T-TGAATTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-C---GA--GCCA
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7130268 53 +  13083262 tt-t---ta--t----a-aca-----ttGAACAAG-C-TGAACTGTTA----AG-----GCTTA-C-TGG--AG-----------AAT-G---GA--ATCt
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   1423 55 +      3484 TT-T---TA--T----A-TAA-----TTTAACAAG-G-GGAATTGTTAA-CCAT-----ACTGC-C-TGG--GG-----------A-T-G---AA--GTCT
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              12736 56 +     17520 TT-T---GA--T----A-ACA-----TTGAGCAAG-A-TGAATTGTTAA-CCAG-----ACTGC-C-T-G-GAG-----------AAT-A--G-A--GTTC
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8577669  4 +  11848649 TA-T---T---------------------------------------------------------------------------------------------
i Jaculus_jaculus.JH725517.1                            I 351 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               27357 56 +     37189 TT-T---TA--T----A-ACA-----CTGAGCAAG-A-TGAATTGTTAA-CCAG-----ACTGC-C-T-G-GAG-----------AAC-A--G-A--GTTC
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          53917 56 -    147782 TT-A---TA--T----A-ATA-----TTGAACAAG-T-TGAATTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-A---AA--GTCC
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    5456 56 +     26176 TT-T---CA--T----A-TCA-----TCAAGCAAG-C-TGAATTGTTAA-CCAG-----ACTGC-T-G-G--GG-----------GAA-T-AA-A--ATCC
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258411297 56 - 285822530 TT-T---TA--T----A-TAA-----TTGAACAAG-G-AGAATTGTTAA-CCAG-----ACTGC-C-TGG--GG-----------AAT-G---AA--GTCT
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        28602 55 +     39228 TT-T---CA--T----A-TAA-----CCGAACAAG-G-GGAATTGTTAA-C-AG-----ACTGC-C-TGG--GG-----------AAT-G---AA--GTCT
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            57966 55 +     63517 TT-T---CA--T----A-TAA-----CCGAACAAG-G-GGAATTGTTAA-C-AG-----ACTGC-C-TGG--GG-----------AAT-G---AA--GTCT
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        36346 55 -     38897 TT-T---CA--T----A-TAA-----TCGAACAAG-G-GGAATTGTTAA-C-AG-----ACTGC-C-TGG--GG-----------AAT-G---AA--GTCT
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      2392 55 -     13103 TT-T---CA--T----A-TAA-----CCGAACAAA-G-GGAATTGTTAA-C-AG-----ACTGC-C-TGG--GG-----------AAT-G---AA--GTCT
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3091338 58 -   3498232 tt-t---ta--t----aaaca-----ttgagCAAG-C-TGAATTGTGAA-TCAG-A---ACTGC-T-T-G--GT-----------GAC-T----AGAGTCC
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    20763 56 +     22452 TT-T---TA--T----A-ACA-----TTGAACAAG-C-TGAATTCTTAA-CCAG-----ACTTC-C-TTG--GG-----------AGT-G---GA--GTAC
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            139670 56 +   3060487 TT-T---GA--T----A-ACA-----TTGAGCAAG-A-TGAATTGTTAA-GCAG-----ACTGC-C-T-G-GAG-----------AAT-A--G-A--GTTC
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19252353 56 +  19376315 TT-T---TA--T----A-GCT-----TTGAACAAG-T-TGAGTTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-G---CA--GCCC
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           15164 56 +     84689 TT-T---TA--T----A-TAA-----TTGAGCAAG-G-TGAATTGTCAA-TCAG-----ACTGC-T-TGG--GG-----------AAT-A---GA--GTCT
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3782903 56 +   6799190 TT-T---TA--T----A-TAA-----TTGAGCAAG-G-TGAATTGTCAA-TCAG-----ACTGC-T-TGG--GG-----------AAT-A---GA--GTCT
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20598696 31 -  62548349 TT-T---TT--T----A-ACC-----TTGAACAAG-C-TGAATTCTTGT----------------------------------------------------
i Loxodonta_africana.GL010040.1                         C 0 I 17
s Lycaon_pictus.CM007556.1                               11095094 58 +  39895028 tt-t---ta--t----aaaca-----ttgagCAAG-C-TGAATTGTGAA-CCAG-A---ACTGC-C-T-G--GT-----------GGC-T----AGAGTCC
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             24104 56 +     74745 TT-T---TA--T----A-GCT-----TTGAACAAG-T-TGAGTTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-G---CA--GCCC
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12710565 56 +  12821369 TT-T---TA--T----A-GCT-----TTGAACAAG-T-TGAGTTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-G---CA--GCCC
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                3138 56 -     26467 TT-T---TA--T----A-GCT-----TTGAACAAG-T-TGAGTTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-G---CA--GCCC
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           51009 56 +     63263 TT-T---TA--T----A-GCT-----TTGAACAAG-T-TGAGTTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-G---CA--GCCC
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 3119 56 -     26361 TT-T---TA--T----A-GCT-----TTGAACAAG-T-TGAGTTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-G---CA--GCCC
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 6309 56 -      7381 TT-T---TA--T----A-GCT-----TTGAACAAG-T-TGAGTTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-G---CA--GCCC
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  49538 56 -     79256 TT-T---TA--T----A-GCT-----TTGAACAAG-T-TGAGTTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-G---CA--GCCC
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196039636 56 + 196197964 TT-T---TA--T----A-GCT-----TTGAACAAG-T-TGAGTTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-G---CA--GCCC
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11449806 56 +  11645122 TT-T---TA--T----A-GCT-----TTGAACAAG-T-TGAGTTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-G---CA--GCCC
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   8492 56 -     46448 TT-T---TA--T----A-GCT-----TTGAACAAG-T-TGAGTTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-G---CA--GCCC
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                6155 56 -     13212 TT-T---TA--T----A-GCT-----TTGAACAAG-T-TGAGTTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-G---CA--GCCC
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 19835 56 -     55006 TT-T---TA--T----A-GCT-----TTGAACAAG-T-TGAGTTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-G---CA--GCCC
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43844950 56 +  43892939 TT-T---TA--T----A-GCT-----TTGAACAAG-T-TGAGTTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-G---CA--GCCC
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               21119 56 -     24607 TT-T---TA--T----A-GCT-----TTGAACAAG-T-TGAGTTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-G---CA--GCCC
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               8489 56 -     27140 TT-T---TA--T----A-GCT-----TTGAACAAG-T-TGAGTTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-G---CA--GCCC
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43441525 56 -  43563597 TT-T---TA--T----A-GCT-----TTGAACAAG-T-TGAGTTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-G---CA--GCCC
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4454329 56 -   4543643 TT-T---TA--T----A-GCT-----TTGAACAAG-T-TGAGTTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-G---CA--GCCC
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            152102 56 +    252755 TT-T---TC--T----A-ACG-----CTGAGGAAG-C-TGAACTCTTAA-CCAG-----ACTGC-C-T-G--AG-----------GAA-T----ACAGTCA
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             39691 56 +     58827 TT-T---TC--T----A-ACG-----CTGAGGAAG-C-TGAATTCTTAA-CCAG-----ACTGC-C-T-G--AG-----------GAA-T----ACAGTCA
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36878137 53 +  64221397 tt-t---ta--t----a-aca-----ttGAACAAG-C-TGAACTGTTA----AG-----ACATA-C-TGG--AG-----------AAT-G---GA--ATCT
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       65494 55 -    234502 TT-T---TA--T----A-ACA-----TGGACCACG-A-TAAATAGTTTA-TCAG-----CCTGC-T---G--GG-----------GGA-C-AG-A--GTCC
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             6257 58 -     87323 TT-T---TA--T----AAACA-----TTGAGCGAG-C-TGAATTGTGAA-TCAG-A---ACTGC-C-T-G--GT-----------GAG-T----ACAATAT
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 1161 57 +    115071 TT-T---TA--T----A-ATA-----CTGAACAAG-C-TGAACTGTTAA-GCAG-----ACTGC-C-TGG-GGG-----------AAT-G---AA--GTCT
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1051432 56 -  26018355 TT-T---TA--T----A-ATA-----CTGAACAGG-C-TGAGCTGTTAC-CCAG-----ACTGC-C-TGG--GG-----------AAT-G---GC--ATCT
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    2327 56 -     12939 TT-T---TA--T----A-ACA-----TTGAGCAAG-A-TGAATTGTTAA-CCAG-----ACTGC-A-T-G-GAG-----------AAT-A--G-A--GTTC
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16514362 52 +  47401472 tt-t---ta--c----A-TAA-----TTGAACAAG-G-GGAATTATTAA-CCAG-----A-----C-TGG--AG-----------AAT-G---AA--GTCT
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  41365 28 -     48017 ---T---TT--T----A-AGC-----TTTACAA-G-C-TGAATTGTTGC----------------------------------------------------
i Microgale_talazaci.MicTal_scaffold_34660              C 0 I 19
s Micronycteris_hirsuta.MicHir_scaffold_37978               24834 56 -     32043 TT-T---TA--T----A-ATA-----TTGAGCAAG-TGTGGATT-GTTA-TCAG-----ACTCC-C-T-G--GG-----------GAA-C-AG-A--GTCC
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22824514 56 -  98408828 TT-T---TA--T----A-ATA-----CTGACCAAG-C-TAAACTGTTAA-GCAG-----AGTGA-G-TAA--GG-----------AAT-A---GA--ATCT
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8212892 56 +  10048721 tt-t---ta--t----t-ata-----ttaagcaAG-C-TGAATTGTTAA-CCAG-----ACTGC-C-T-G--GG-----------GAA-C-AG-A--GTCC
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            37382 56 +     45743 TT-T---TA--T----T-ATA-----TTAAGCAAG-C-TGAATTGTTAA-CCAG-----ACTGC-C-T-G--GG-----------GAG-C-AG-A--GTCC
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         6071 56 +     29742 TT-T---TA--T----A-GCT-----TTGAACAAG-T-TGAATTGTTAA-CTAC-----ACTGC-C-CAG--GG-----------AAT-G---GA--GCTC
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        16834 58 -    104932 TT-T---TA--T----AAACA-----TTGAGCAAG-C-TGAATTGTGAA-TCAG-A---ACTGC-T-T-G--GT-----------GAC-T----AGAGTCC
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     5044 52 -     12809 TT-T---TA--C----C-TAA-----TTGAACAAG-G-AGAATTGTTAA-CCAG-----A-----C-TGG--AG-----------AAT-G---AA--GTCT
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 150117 56 +    154973 TT-T---GA--T----A-ACA-----TGGAGCAAG-A-TGAATTGTTAA-CCAG-----ACTGC-C-T-G-GAG-----------AAT-A--G-A--GTTC
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                163373 55 +    265003 CT-T---TA--T----A-ACA-----TTGAGCAAG-C-TGAATT-GTTA-CCAG-----AATGC-C-T-G--GA-----------GCA-T-AG-A--GCCC
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  6118 47 -     19904 TT-T---TA--T----A-ATA-----TTGAGCAAG-A-TGGATTATTAG-CCAA-----CTTGC-C-G-G-GAG-----------A---------------
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 I 4
s Mungos_mungo.MunMun_flattened_line_8729                  150244 24 -    168139 ----------------------------------------------------AG-A---ACTAC-C-T-G--GT-----------AAT-T----AGAATCC
i Mungos_mungo.MunMun_flattened_line_8729               I 10 C 0
s Murina_feae.MurFea_scaffold_2254                          24308 54 -    100666 TT-T---TA--T----A-TCA-----TCGAGCAAG-C-TGAATTGTTAA-CCAG-----ACTGC-C-T-G--GG-----------GAA-T----A--GTCC
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70771733 55 +  92629107 TT-T---TA--T----A-ATA-----CTGAACAAG-C-TGAACTG--AA-CCAG-----AGAGC-A-TAGA-GG-----------AAT-G---AA--GTCT
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75493787 55 +  98207768 TT-T---TA--T----A-ATA-----CTGAAAAAG-C-TGAACTG--AA-CCAG-----AGAGC-A-TAGA-GG-----------AAT-A---AA--GTCT
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67560554 40 +  89017189 -------------------------------CAAG-C-TGGACTG--AA-CCAG-----ACAGC-A-TAGA-GG-----------AAT-G---AA--GTCC
i Mus_pahari.LT608305.1                                 I 6 C 0
s Mus_spretus.CM004110.1                                 74336513 55 +  97876770 TT-T---TA--T----A-ATA-----CTGAAAAGG-C-TGAACTG--AA-CCAG-----AGAGC-A-TAGA-GG-----------AAT-G---AA--GTCT
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             14761 56 +     98495 CT-A---TA--T----A-ACA-----TTGAACAAG-T-TGAATTGTTAA-TGAG-----GCTGC-C-TGG--AA-----------AAT-A---GA--GTCT
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4428096 58 -  28371801 tt-t---ta--t----aaaca-----ttgagCAAG-C-TGAATTGTGAA-TCAG-A---ACTGC-C-T-G--GT-----------GAA-T----ACAATAC
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myotis_brandtii.KE161952.1                               971178 56 +   8389877 tt-t---ta--t----a-taa-----ttgagCAAG-C-TGAATTGTTAA-CCAG-----ACTGC-C-T-G--GG-----------GAA-T-AA-A--GTCC
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5022599 56 +   6462685 tt-t---ta--t----a-taa-----ttgagCACA-C-TGAATTGTTAA-CCAG-----ACTGC-C-T-G--GG-----------GAA-T-AA-A--GTCC
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3468682 56 -   3747815 tt-t---ta--t----a-taa-----ttgagCAAG-C-TGAATTGTTAA-CCAG-----ACTGC-C-T-G--GG-----------GAA-T-AA-A--GTCC
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        13923 56 +     66751 TT-T---TA--T----A-TAA-----TTGAGCAAG-C-TGAATTGTTAA-TCAG-----ACTGC-C-T-G--GG-----------GAA-T-AA-A--GTCC
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             7541 51 -      8794 -----------T----A-ACT-----TTGAACACG-T-GAAGTTGTTAA-CCAA-----ACTGC-CTA-A--AG-----------AAT-G---GA--ACAC
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            120267 56 +    362372 TT-T---TA--T----A-ACA-----TTGAACAAG-C-ACTGTTCTTAA-CCAG-----ACTGC-C-TGG--GG-----------AAT-G---GA--GTCT
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4490232 58 -  14209539 tt-t---ta--t----aaaca-----ttgagCAAG-C-TGAATTGTGAA-TCAG-A---ACTGC-T-T-G--GT-----------GAC-T----AGAGTCC
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3954708 56 -   4490290 TT-T---GA--T----A-ACA-----TGGAGCAAG-A-TGAATTGTTAA-ACAG-----ACTGC-C-T-G-GAG-----------AAT-A--G-A--GTTC
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  50460 32 +     94413 -----------------------------------------GTT-GTTA-CATG-----ACTGC-C-T-A--GG-----------GAA-T-AG-A--GTCC
i Noctilio_leporinus.NocLep_scaffold_12062              I 5 C 0
s Nomascus_annamensis.k141_1817463                            760 56 -      1070 TG-T---TA--T----A-GCT-----TTGAACAAG-T-TCAATTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-G---GA--GCCA
i Nomascus_annamensis.k141_1817463                      C 0 C 0
s Nomascus_concolor.k141_226614                              5032 55 -      5092 TT-T---TA--T----A-GCT-----TTGAACAAG-T-TGAATTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-C---GA--GCC-
i Nomascus_concolor.k141_226614                         I 10 n 55
s Nomascus_gabriellae.k141_1400361                            690 56 -      2203 TG-T---TA--T----A-GCT-----TTGAACAAG-T-TCAATTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-C---GA--GCCA
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_1022                             714 56 -     11638 TT-T---TA--T----A-GCT-----TTGAACAAG-T-TCAATTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-C---GA--GCCA
i Nomascus_siki_b.tarseq_1022                       C 0 C 0
s Nomascus_siki_a.k141_421408                                   604 56 +     16235 TT-T---TA--T----A-GCT-----TTGAACAAG-T-TGAATTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-C---GA--GCCA
i Nomascus_siki_a.k141_421408                             C 0 I 30
s Nyctereutes_procyonoides.CAJHUB010000786.1                37959 58 +   3668941 tt-t---ta--t----aaaca-----ttgagCAAG-C-TGAATTGTGAA-CCAG-A---ACTGC-C-T-G--GT-----------GGC-T----AGAGTCC
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65571727 56 -  95554990 TT-T---TA--C----A-TAA-----TTGAGCAAG-G-TGAATTGTCAA-TCAG-----ACTGC-T-TGG--GG-----------AAT-A---GA--GTCT
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_771591                            15136 56 +     16181 TT-T---TA--C----A-TAA-----TTGAGCAAG-G-TGAATTGTCAA-TCAG-----ACTGC-T-TGG--GG-----------AAT-A---GA--GTCT
i Nycticebus_coucang.k141_771591                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65679923 56 +  89412551 TT-T---TA--C----A-TAA-----TTGAGCAAG-G-TGAATTGTCAA-TCAG-----ACTGC-T-TGG--GG-----------AAT-A---GA--GTCT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Odobenus_rosmarus.KB229369.1                             684935 58 -   3126709 tt-t---ta--t----aaaca-----ttgagCAAG-C-TGAATTGTGAA-TCAG-A---ACTGC-T-T-G--GT-----------GAC-T----AGAGTCC
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1083550 47 +   1425656 tt-t---ta--t----a-ata-----ttgagcAAG-A-TGAATTATTAA-Ccaa-----attgc-c-t-g-gag-----------a---------------
i Odocoileus_virginianus.KZ101650.1                     C 0 I 4
s Okapia_johnstoni.LVCL01S0017931.1                         41633 47 +     78940 tt-t---ta--t----a-ata-----ttgagcAAG-A-TGAATTATTAA-Ccaa-----attgc-c-t-g-gag-----------a---------------
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 I 4
s Ondatra_zibethicus.OndZib_scaffold_6821                  130310 56 +    145789 TT-T---TA--T----A-ATA-----CTGACTAAG-C-TAAACTGTTAA-CCAG-----AGTGA-G-TAG--GG-----------AAT-A---GA--GTCT
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  43003 56 +     62360 TT-T---TA--T----A-ATA-----CTTAACAAG-C-TGAACTCTTAA-ATAG-----ACTGC-C-TGG--GG-----------AAT-G---GA--GTCT
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7228383 56 -   7562323 TT-T---GA--T----A-ACA-----TTGAGCAAG-A-TGAATTGTTAA-CCAG-----ACTCC-C-T-G-GAG-----------AAT-A--G-A--GTTC
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              64164 31 -     66828 TT-T---TT--T----A-ACC-----TTGAACTAA-C-TGGATTGTTTA----------------------------------------------------
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 I 19
s Oryctolagus_cuniculus.CM000803.1                      141883778 56 + 163896628 tt-t---ta--t----a-ata-----ttgaaCAAG-C-TGAATTCTTAA-CCAG-----ACTTC-C-TAG--GG-----------AGT-G---GA--GTAC
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      315097 58 -    505867 tt-t---ta--t----aaaca-----ttgagCAAG-C-TGAATTGTGAA-CCAG-A---ACTGC-C-T-G--GT-----------GGC-T----AGAGTCC
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        5076 56 -     53940 TT-T---TA--T----A-TAA-----TTGAACAAG-G-TGAATTGTTTA-TCAG-----ACTGC-T-TGG--GG-----------AAT-A---CA--GTCT
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18013049 56 -  38779656 tt-t---ta--t----a-taa-----ttgaaCAAG-G-TGAATTGTTTA-TCAG-----ACTGC-T-TGG--GG-----------AAT-A---CA--GTCT
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134082555 47 - 275406953 TT-T---TA--T----A-CTA-----TTGAACAAG-A-TGAATTATTAA-CCaa-----attgc-c-t-a-gag-----------a---------------
i Ovis_aries.CM001582.2                                 C 0 I 4
s Ovis_canadensis.OviCan_scaffold_6251                      83790 47 +    140051 TT-T---TA--T----A-ATA-----TTGAACAAG-A-TGAATTATTAA-CCAA-----ATTGC-C-T-A-GAG-----------A---------------
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 I 4
s Pan_paniscus.CM003386.1                               127578427 56 - 205426864 TT-T---TA--T----A-GCT-----TTGAACAAG-T-TGAATTGTTAA-CTAG-----TCTGC-C-CAG--GG-----------AAT-G---GA--GCCC
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120155587 56 - 196562556 TT-T---TA--T----A-GCT-----TTGAACAAG-T-TGAATTGTTAA-CTAG-----TCTGC-C-CAG--GG-----------AAT-G---GA--GCCC
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  39845 35 +    295523 ----------------------------------------------------AG-A---ACTGC-C-T-G--GAATTCTCTGTTAAAC-T----AGAATCT
i Panthera_onca.PanOnc_flattened_line_1615              I 10 C 0
s Panthera_pardus.KV860323.1                              3643660 35 +  18214204 ----------------------------------------------------AG-A---ACTGC-C-T-G--GAATTCTCTGTTAAAC-T----AGAATCT
i Panthera_pardus.KV860323.1                            I 10 C 0
s Panthera_tigris.KE721879.1                              5033308 35 -   6340057 ----------------------------------------------------ag----aacTGC-C-T-G--GAATTCTCTGTTAAAC-T----AGAATCT
i Panthera_tigris.KE721879.1                            I 10 C 0
s Pantholops_hodgsonii.KE114631.1                         1071431 47 -   1292953 tt-t---ta--t----a-ata-----ttgagcAAG-A-TGAATTATTAA-CCaa-----attgc-c-t-a-gag-----------a---------------
i Pantholops_hodgsonii.KE114631.1                       C 0 I 4
s Papio_anubis.CM001492.2                               188160314 56 - 188283584 TT-T---TA--T----A-GCT-----TTGAACAAG-C-TGAATTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-G---CA--GCCC
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              3404 56 +     25005 TT-T---TA--T----A-GCT-----TTGAACAAG-T-TGAGTTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-G---CA--GCCC
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47517686 56 +  47705337 TT-T---TA--T----A-GCT-----TTGAACAAG-C-TGAATTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-G---CA--GCCC
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 71677 56 -    104429 TT-T---TA--T----A-GCT-----TTGAACAAG-T-TGAGTTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-G---CA--GCCC
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   10209 56 +     14967 TT-T---TA--T----A-GCT-----TTGAACAAG-C-TGAATTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-G---CA--GCCC
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 6074 56 -      7628 TT-T---TA--T----A-GCT-----TTGAACAAG-C-TGAATTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-G---CA--GCCC
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    121346 24 -    135482 ----------------------------------------------------AG-A---ACTGC-C-T-G--GT-----------GAC-T----AGGATCC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 I 10 C 0
s Perodicticus_ibeanus.k141_117958                          10749 52 -     23713 TT-T---TA--T----A-TAA-----TTGAACAAG-G-TGAACTGTT-----AG-----ACTGC-T-TGG--GG-----------AAT-A---GA--GTCT
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           11889 52 +     61070 TT-T---TA--T----A-TAA-----TTGAACAAG-G-TGAATTGTT-----AG-----ACTGC-T-TGG--GG-----------AAT-A---GA--GTCT
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       2169 35 +     49596 TT-T---TA--T----A-ACA-----TTGAACAAC-T-TGCACTATTAA-CCAG-----------------------------------------------
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 I 13
s Peromyscus_maniculatus.KI615518.1                       4955366 57 -   8017169 tt-t---ta--t----a-ata-----cttaACAAG-C-TGAACTCTTAA-TCAG-----ACTGC-C-TGG--GG-----------AATAG---GA--GTCT
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    17221 39 -     36578 TT-T---TA--T----A-ATA-----TTGAATAAG-C-TGAACAGTTAA-AATG-----ACTG--------------------------------------
i Petromus_typicus.PetTyp_scaffold_33007                C 0 I 16
s Phocoena_phocoena.PhoPho_flattened_line_53071              2849 56 +      8220 TT-T---GA--T----A-ACA-----TGGAGCAAG-A-TGAATTGTTAA-ACAG-----ACTGC-C-T-G-GAG-----------AAT-A--G-A--GTTC
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            99469 56 +    112873 TT-T---CA--T----A-TCA-----CTGAGCAAG-C-TGAATTATTAA-CCAG-----ACTGC-T-T-G--GG-----------GAA-T-AA-A--GTCC
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           9320 56 +     21690 TT-T---TA--C----A-ACA-----TTGAGCAAG-A-TGAATTGTTAA-CCAG-----ACTGC-C-T-G-GAG-----------AAT-A--G-A--GTTC
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       26009 56 +     44506 TT-A---AA--T----A-ATA-----TTGAACAAG-C-TAAATTGTTAA-TTAG-----ACTGC-C-CAG--GG-----------AAT-A---GA--GCCC
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        26222 56 +     67491 TT-A---TA--T----A-ATA-----TTGAACAAG-C-TAAATTGTTAA-TTAG-----ACTGC-C-CAG--GG-----------AAT-A---GA--GTCC
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      16461 56 -     98129 TT-A---TA--T----A-ATA-----TTGAACAAG-C-TAAATTGTTAA-TTAG-----ACTGC-C-CAG--GG-----------AAT-A---GA--GTCC
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     26062 56 +    147771 TT-A---TA--T----A-ATA-----TTGAACAAG-C-TAAATTGTTAA-TTAG-----ACTGC-C-CAG--GG-----------AAT-A---GA--GTCC
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         2697 56 -     43940 TT-A---TA--T----A-ATA-----TTGAACAAG-C-TAAATTGTTAA-TTAG-----ACTGC-C-CAG--GG-----------AAT-A---GA--GTCC
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          6780 56 -     55515 TT-A---TA--T----A-ATA-----TTGAACAAG-C-TAAATTGTTAA-TTAG-----ACTGC-C-CAG--GG-----------AAT-A---GA--GTCC
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         26134 56 +    152463 TT-A---TA--T----A-ATA-----TTGAACAAG-C-TAAATTGTTAA-TTAG-----ACTGC-C-CAG--GG-----------AAT-A---GA--GTCC
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       3942 56 -    119457 TT-A---TA--T----A-ATA-----TTGAACAAG-C-TAAATTGTTAA-TTAG-----ACTGC-C-CAG--GG-----------AAT-A---GA--GTCC
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         15857 56 +    134592 TT-A---TA--T----A-ATA-----TTGAACAAG-C-TAAATTGTTAA-TTAG-----ACTGC-C-CAG--GG-----------AAT-A---GA--GTCC
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          26444 56 -     75465 TT-A---TA--T----A-ATA-----TTGAACAAG-C-TAAATTGTTAA-TTAG-----ACTGC-C-CAG--GG-----------AAT-A---GA--GTCC
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              191057 56 -    373494 TT-T---TA--C----A-GCT-----TTGAACAAG-T-TGAATTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-G---GA--GCCA
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19811704 56 +  19899266 TT-T---TA--C----A-GCT-----TTGAACAAG-T-TGAATTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-G---GA--GCCA
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                3874 31 -      9567 TT-T---TT--C----A-ATC-----TTTGACAAG-C-TAAGTTCTTAT----------------------------------------------------
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 I 20
s Prolemur_simus.MPIZ01000048.1                           6852671 56 +  12164890 tt-t---ta--t----a-taa-----tcaaacAAG-G-GGAATTGTTAA-CCAG-----ACTGC-C-TGG--GG-----------AAT-T---AA--GTCT
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coronatus.k141_1353159                         7757 56 +     11805 TT-T---TA--T----A-TAA-----TCAAACAAG-G-GGAATTGTTAA-CCAG-----ACTGC-C-TGG--GG-----------AAT-G---AA--GTCT
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           47092 56 +     52369 TT-T---TA--T----A-TAA-----TCAAACAAG-G-GGAATTGTTAA-CCAG-----ACTGC-C-TGG--GG-----------AAT-G---AA--GTCT
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         39479 56 -     44753 TT-T---TA--T----A-TAA-----TCAAACAAG-G-GGAATTGTTGA-CCAG-----ACTGc-c-tgg--ag-----------aat-g---aa--gtct
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            21402 56 +     27322 TT-T---TA--T----A-TAA-----TCAAACAAG-G-GGAATTGTTAA-CCAG-----ACTGC-C-TGG--GG-----------AAT-G---AA--GTCT
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       21050 56 -     53241 TT-T---TA--T----A-TAA-----TCAAACAAG-G-GGAATTGTTAA-CCAG-----ACTGC-C-TGG--GG-----------AAT-G---AA--GTCT
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         43313 56 -     48185 TT-T---TA--T----A-TAA-----TCAAACAAG-G-GGAATTGTTAA-CCAG-----ACTGC-C-TGG--GG-----------AAT-G---AA--GTTT
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           38156 57 +     77221 AT-T---TA--T----A-ATA-----CTGAACAAG-C-TGAACTGGTAA-GCAG-----ACTGC-C-TGG-GGG-----------AAG-G---AA--GTCT
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            6017 55 -     27784 tt-t---ta--t----a-ata-----ttgagCAAG-C-TGAATT-GTTG-CCAG-----ACTGC-C-T-G--GG-----------GAA-T-AG-A--GCCC
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        250226 57 -    344369 TT-T---TA--T----AAACA-----TTGAGCGAG-C-TGAATTGTGAA-TCAG-----ACTGC-C-T-G--GT-----------GAG-T----ACAATAC
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Puma_concolor.QAVW01000427.1                          131539956 35 - 161321710 ----------------------------------------------------ag----aactgc-c-t-g--gaattctctgttAAAC-T----AGAATCT
i Puma_concolor.QAVW01000427.1                          I 10 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                20414 47 +     68503 TT-T---TA--T----A-ATA-----TTGAGCAAG-A-TGAATTATTAA-CCAA-----ATTGC-C-T-G-GAG-----------A---------------
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 I 4
s Rattus_norvegicus.chr11                                13917569 55 +  90463843 TT-T---TA--T----A-ATA-----CTGAACAAG-A-TGACCCG--AA-CCAG-----ACAGT-C-TGGA-GG-----------AAT-G---AA--GCCT
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1792530 55 +   2252614 TT-T---TA--C----A-ACA-----TTGAACAAG-C-TGAATTGTTAA-CCAG-----CCTGC-T---G--GG-----------GAA-T-AA-A--GTCC
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                       824 47 -      4338 TT-T---TA--T----A-ATA-----TTGAGCAAG-A-TGAATTATTAA-CCAA-----ATTGC-C-T-A-GAG-----------A---------------
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 I 4
s Saimiri_boliviensis.NW_024100938.1                     15676466 55 -  43202129 tt-a---ta--t----a-ata-----ttgaaCAAG-C-TAAATTGTTA--CTAG-----ACTGC-C-CAG--GG-----------AAT-A---GA--GTCC
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        8379 55 +     34089 TT-A---TA--T----A-ATA-----TTGAACAAG-C-TAAATTGTTA--CTAG-----ACTGC-C-CAG--GG-----------AAT-A---GA--GTCC
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              8319 55 -     60842 TT-A---TA--T----A-ATA-----TTGAACAAG-C-TAAATTGTTA--CTAG-----ACTGC-C-CAG--GG-----------AAT-A---GA--GTCC
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              8413 55 +     67014 TT-A---TA--T----A-ATA-----TTGAACAAG-C-TAAATTGTTA--CTAG-----ACTGC-C-CAG--GG-----------AAT-A---GA--GTCC
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              8390 55 +     60816 TT-A---TA--T----A-ATA-----TTGAACAAG-C-TAAATTGTTA--CTAG-----ACTGC-C-CAG--GG-----------AAT-A---GA--GTCC
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 8327 55 -     76454 TT-A---TA--T----A-ATA-----TTGAACAAG-C-TAAATTGTTA--CTAG-----ACTGC-C-CAG--GG-----------AAT-A---GA--GTCC
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17345114 55 -  30362882 TT-A---TA--T----A-ATA-----TTGAACAAG-C-TAAATTGTTA--CTAG-----ACTGC-C-CAG--GG-----------AAT-A---GA--GTCC
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         24435 55 -     62485 TT-A---TA--T----A-ATA-----TTGAACAAG-C-TAAATTGTTA--CTAG-----ACTGC-C-CAG--GG-----------AAT-A---GA--GTCC
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   39550 55 -    114521 TT-T---TA--T----G-ACA-----ATGAACAAG-T-TGAATTG-TAA-CCAA-----ACTGT-C-T-G--GG-------G--AATA-G----A--ATCC
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  104935 58 -    120886 TT-TTTTTT--T----A-ATA-----GTGAA-AGG-C-TGAACTGTTAA-CCAG-----ACTGT-C-TGA--GA-----------AGT-A---GA--GTCT
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            23473 54 +    739146 TC-T---TA--T----A-ACA-----CTGAACAAG-T-TGAACTGCTTA-CCAG-----ACTGC-C-A-G--AG-----------AAT-G----A--ATCT
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17769926 53 -  27805282 tt-t---ta--t----a-CCATTGAAGTAACTGAA-T-T-----ACTTA-TCAA-----AGTGT-C---C--AG-----------agt-a----t--agat
i Sorex_araneus.JH798170.1                              C 0 I 3
s Spermophilus_dauricus.KZ294190.1                        2243973 53 +   2842873 tt-t---ta--t----a-aca-----ttGAACAAG-C-TGAACTGTTA----AG-----ACTTA-C-TGA--AG-----------AAT-G---GA--ATCT
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             238743 58 -    276980 TT-T---TA--T----AAACA-----TTGAGCAAA-C-TGAATTGTGAA-TCAG-A---ACTGC-C-T-G--GT-----------GAA-T----ACAATAT
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            33161 24 +     62062 ----------------------------------------------------AG-A---ACTGC-C-T-G--GT-----------AAT-T----AGAATCC
i Suricata_suricatta.SurSur_flattened_line_20339        I 10 C 0
s Sus_scrofa.CM000824.4                                 189274923 55 + 218635234 T--T---TA--T----A-ACA-----TTGAGCAAA-G-TAAATTATTAA-CCAG-----ATTGC-C-T-G--GG-----------GAA-T----AGAGCCC
i Sus_scrofa.CM000824.4                                 C 0 I 3
s Symphalangus_syndactylus.tarseq_24                        18727 56 -  13920577 TG-T---TA--T----A-GCT-----TTGAACAAG-T-TGAATTGTCAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-C---GA--GCCA
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                2243 56 +     20549 TT-T---TA--C----T-ACA-----TTAAGCAAG-C-TTATTTGTTAA-CCAG-----ACTAC-C-T-G--GG-----------GAA-T-AG-A--GTCC
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               17214 51 +     45698 -----------T----A-ACT-----TTGAACAGG-T-GAAATTTTTAA-CCAA-----ACTGC-CTA-A--AG-----------AAT-G---GA--ACAC
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      810712 53 +   1148477 TT-T---CG--T----A-ACT-------GA-CAAG-C-TGAATTGTTAA-CAAG-----ACTGC-C-T-G--GG-----------GAG-T----AGAGTCC
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  61354 53 +     99546 TT-T---CA--T----A-ACT-------GA-CAAG-C-TGAATTGTTAA-CAAG-----ACTGC-C-T-G--GG-----------GAG-T----AGAGTCC
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               31297 56 +     42269 TT-T---TA--T----A-ATA-----TTGAACAAG-C-TGAATTGTTAA-GCAG-----AATAC-C-TGG--GA-----------AAT-G---AA--ATCC
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               64606 56 +     65473 TT-T---TA--T----A-ATA-----TTGAACAAG-C-TGAATTGTTAA-GCAG-----AATAC-C-TGG--GG-----------AAT-G---AA--ATCC
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194011847 56 - 194193292 TT-T---TA--T----A-GCT-----TTGAACAAG-T-TGAGTTGTTAA-CTAG-----ACTGC-C-CAG--GG-----------AAT-G---CA--GCCC
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  138015 36 -    259118 TT-T---TA--T----A-ATA-----TTGAGCAAG-C-TAAATT-GTTA-TCAG-----AC----------------------------------------
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 I 15
s Tragulus_javanicus.TraJav_scaffold_14717                   9451 37 +     90398 TT-T---TA--T----A-ATA-----TTGAGCAAG-A-TCAACTATTAA-Ccag-----tt----------------------------------------
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 I 743
s Trichechus_manatus.JH594618.1                          16089773 31 +  31416278 TT-T---TT--T----A-ACC-----TTGAACAGG-C-TGAATTCTTGT----------------------------------------------------
i Trichechus_manatus.JH594618.1                         C 0 I 20
s Tupaia_chinensis.KB320831.1                             2797677 56 -   3938065 tt-t---ta--t----a-aca-----ttGAACAAG-C-TGAATTGTTAC-CTAG-----ATTGC-C-TGG--AG-----------AAT-T---AA--GTAC
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    9612 56 +     13056 TT-T---TA--T----A-ATA-----TTGAACAAG-C-TGAATTGTTAC-CTAG-----ATTGC-C-TGG--GG-----------AAT-T---AA--GTAC
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69317112 56 -  96451834 TT-T---GA--T----A-ACA-----TTGAGCAAG-A-TGAATTGTTAA-CCAG-----ACTCC-C-T-G-GAG-----------AAT-A--G-A--GTTc
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                      19 53 +    136657 TT-T---TA--T----G-ACA-----ACAAACAAG-T-TGAATTG-CCA-CCAA-----GCTCT-C-T-A--GG-----------AGA-T----A--GTCT
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 C 0
s Ursus_maritimus.KK498671.1                              6520400 58 +  28682327 TT-T---TG--T----AAACA-----TTGAGCAAG-C-TGAATTGTGCA-TCAG-A---ACTGA-C-T-G--GT-----------GAC-T----AGAgtcc
i Ursus_maritimus.KK498671.1                            C 0 I 238
s Varecia_rubra.k141_432109                                  9314 56 -     20643 TT-T---TA--T----A-TAA-----TCGAGCAAG-G-GGAATTGTTAA-CCAG-----ACTGC-C-TGG--GG-----------AAT-G---AA--GTCT
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             28849 56 -     33872 TT-T---TA--T----A-TAA-----TCGAGCAAG-G-GGAATTGTTAA-CCAG-----ACTGC-C-TGG--GG-----------AAT-G---AA--GTCT
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1528149 60 -   2331223 tt-t---tt--ttttaa-aca-----ttgagcAAG-C-TAAATTGTTAA-CCAG-----ACTGC-C-T-G--GG-----------GAA-T-AG-A--GTCC
i Vicugna_pacos.KN269600.1                              C 0 I 13
s Vulpes_lagopus.VulLag_flattened_line_2045                144324 58 -    281493 TT-T---TA--T----AAACA-----TTGAGCAAG-C-TGAATTGTGAA-CCAG-A---ACTGC-C-T-G--GT-----------GGC-T----AGAGTCT
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       131469 53 -    134049 TT-T---TA--T----A-ACA-----TTGAACAAG-C-TGAACTGTTA----AG-----ACTTc-c-tgg--ag-----------aat-g---aa--gtct
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        219791 58 -    227762 TT-T---TA--T----AAACA-----CTGAGCAAG-C-TGAATTGTGAA-TCAG-A---ACTGC-T-T-G--GT-----------GAC-T----AGAGTCC
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_256618                      403  5 -      2259 TGTT---G---------------------------------------------------------------------------------------------
i Zapus_hudsonius.ZapHud_scaffold_256618                I 1 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            1859 56 -     13665 TT-T---TA--T----A-ACA-----TTGAGTAAT-A-TGAATTGTTAA-CCAG-----ACTGC-C-T-G-GAG-----------AAT-A--G-A--GTTC
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           4544  0 -      6963 C
e Ochotona_princeps.JH802095.1                            4999348 675 -  23139505 I
e Tolypeutes_matacus.TolMat_scaffold_475685                   382  0 -      3104 C
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Elephantulus_edwardii.JH947210.1                        7830035 1277 +  15467074 I
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Echinops_telfairi.JH980316.1                           22999931  2 -  44670279 I
e Trachypithecus_pileatus.k141_1022309                       5226  0 +     13828 C
e Trachypithecus_phayrei.ctg3                            44662914  0 -  44834318 C
e Trachypithecus_obscurus.k141_1115109                       8130  0 -     28054 C
e Trachypithecus_melamera.k141_699241                        2986  0 -     24393 C
e Trachypithecus_leucocephalus.k141_381681                   3005  0 +     12481 C
e Trachypithecus_laotum.k141_760702                          4719  0 +     14371 C
e Trachypithecus_hatinhensis.k141_504423                     6067  0 -     15592 C
e Trachypithecus_germaini.k141_868450                        3883  0 -     11566 C
e Trachypithecus_geei.k141_670367                           46082  0 -     54611 C
e Trachypithecus_francoisi.k141_768164                       4689  0 -     14244 C
e Trachypithecus_cristatus.k141_1011511                      5261  0 -     12939 C
e Trachypithecus_crepusculus.k141_1588528                   23360  0 -     32910 C
e Trachypithecus_auratus.k141_738098                        29800  0 +     38948 C
e Semnopithecus_vetulus.k141_1143185                        16479  0 +     30600 C
e Semnopithecus_schistaceus.k141_387461                     33457  0 +     42640 C
e Semnopithecus_priam.k141_410937                           40312  0 +     46263 C
e Semnopithecus_johnii.k141_785014                         121532  0 +    130994 C
e Semnopithecus_hypoleucos.k141_761524                      11528  0 +     20762 C
e Semnopithecus_entellus.k141_1572367                        6153  0 +     15331 C
e Rhinopithecus_strykeri.ctg4                            44859307  0 -  45163003 C
e Rhinopithecus_bieti.k119_554384                            2917  0 -     17045 C
e Pygathrix_nigripes_a.k141_101123                             8537  0 +     18040 C
e Pygathrix_nigripes_b.ctg79                                 6809148  0 +   6970761 C
e Pygathrix_cinerea.k141_374971                             32651  0 +     56732 C
e Propithecus_coquerelli.NW_012147863.1                     21633  0 -     30946 C
e Presbytis_mitrata.k141_860013                              8661  0 +     14865 C
e Presbytis_comata.k141_672698                               8546  0 -     15069 C
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000036.1               26743271  0 +  26888534 C
e Piliocolobus_kirkii.k141_929665                            4788  0 +      7694 C
e Piliocolobus_gordonorum.k141_1270531                       5421  0 -     17985 C
e Piliocolobus_badius.k141_1987485                           4802  0 -      5908 C
e Octodon_degus.JH651621.1                                3687420 1881 +  10294119 I
e Nasalis_larvatus.k141_153429                              11264  0 +     48152 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     91920 1922 -    117718 I
e Hystrix_cristata.HysCri_scaffold_50788                     7688 1865 +     22540 I
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 32592 1717 -     67205 I
e Colobus_polykomos.k141_1406057                            19335  0 +     23629 C
e Colobus_guereza.LG08                                  147667351  0 + 156195979 C
e Colobus_angolensis.KN985967.1                          10889423  0 +  10971483 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               17506 30 +    209709 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
s Acinonyx_jubatus.LLWD01000356.1                         2039466 34 +   3721120 TCTG-TT-A-------AACATC-----A--TTTTC---ATAC--TA-TT-TAG-------------------A-C-A-------------------A
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    117725 34 -    189883 TGTG-TT--T------AATAGC-----A--TATTC---TTGC--TA-TT-TCT-------------------A-C-A-------------------T
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10663423 34 +  23371972 cct---------gtttaatata-----a--ttttc---ttac--tA-TT-TAG-------------------A-T-G-------------------A
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 259 C 0
s Ailurus_fulgens.LNAC01000003.1                          7099961 24 -  16596857 TCT---------gcttaatata-----a--ttttc---ttac--t----------------------------------------------------
i Ailurus_fulgens.LNAC01000003.1                        C 0 I 6
s Allenopithecus_nigroviridis.k141_2469532                   5379 30 -     60446 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         6096 30 -     29318 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         5034 30 +     38766 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          5990 30 -     80423 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                               962 30 +     19852 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------G
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                3218 30 -     12443 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------G
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                              517 30 +      5070 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------G
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                  262 30 -      1641 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-CAG-------------------A-T-A-------------------G
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          3001 30 -     24210 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------G
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           29583 30 -     30219 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------G
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_405616                              5419 30 +     16794 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                             551 30 -      1470 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-CAG-------------------A-T-A-------------------G
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             4696 30 -      9835 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-CAG-------------------A-T-A-------------------G
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3525473 34 +   4113121 tctG----AT----T-AATGTA-----T--GTTTC---TTAC--TA-TC-TAG-------------------A-C-A-------------------A
i Ammotragus_lervia.NIVO01013474.1                      I 4 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      392509 34 -    631301 TCTG-TT----C----AACATA-----A--TTTTC---TTAC--TA-TT-TAG-------------------C-C-A-------------------A
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             2904 34 +     55446 TCTG----AT----T-AATGGA-----T--GTTCC---TTAC--TA-TC-TGG-------------------A-C-A-------------------A
i Antilocapra_americana.AntAmePen_scaffold_27338        I 4 C 0
s Aotus_azarae.k141_3170768                                 66309 30 +     78111 TCT-------------AATATA-----A--CTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Aotus_azarae.k141_3170768                             C 0 I 4
s Aotus_griseimembra.k141_3275623                            9255 30 +     22701 TCT-------------AATATA-----A--CTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Aotus_griseimembra.k141_3275623                       C 0 I 4
s Aotus_nancymaae.KZ196176.1                              5753213 30 +   9889416 TCT-------------AATATA-----A--CTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Aotus_nancymaae.KZ196176.1                            C 0 I 4
s Aotus_trivirgatus.k141_1740727                             9811 30 -    104377 TCT-------------AATATA-----A--CTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Aotus_trivirgatus.k141_1740727                        C 0 I 4
s Aotus_vociferans.k141_718647                               9818 30 +     23246 TCT-------------AATATA-----A--CTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Aotus_vociferans.k141_718647                          C 0 I 4
s Aplodontia_rufa.AprRuf_scaffold_101456                     2345 34 +     11424 TCTG-TT--T------GATATA-----A--TTTTC---CTAC--TG-TT-TAG-------------------A-C-A-------------------A
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        6427 32 +      9265 TCTG-TT--T------AACAAA-----A--TTTTC---TAAT--TA-TT-TAG-------------------A-T----------------------
i Arctocebus_calabarensis.k141_587554                   C 0 I 1
s Artibeus_jamaicensis.ArtJam_scaffold_41619                10934 34 -     29036 TCTG-TT----C----AACATA-----A--TTTTG---TTAC--TA-TT-TAG-------------------A-C-A-------------------A
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9543105 30 +  39197703 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------G
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             64378 30 +     85812 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------G
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                15391 30 +     89302 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------G
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             19892 30 -     58268 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------G
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             67886 30 +    119057 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------G
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               9855 30 -     25888 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------G
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                10906 34 -     16375 TCTG-TT--T------AATACA-----A--TTTTC---TTAG--TA-TT-TGG-------------------A-T-A-------------------A
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               4522 34 +      6337 TCTG-TT--T------AATACA-----A--TTTTC---TTAG--TA-TT-TGG-------------------A-T-A-------------------A
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26383957 34 +  51448160 tct---------gtttaatata-----t--ttttc---ttat--ta-tt-tag-------------------a-C-A-------------------A
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        9130 34 -     13118 tct---------gtttaatata-----t--ttttc---ttat--ta-tt-tag-------------------a-C-A-------------------A
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   47935 34 -     72089 TCTG----AT----T-AATGTA-----T--GTTTC---TTAC--TA-TC-TAG-------------------A-T-A-------------------A
i Beatragus_hunteri.BeaHun_scaffold_21644               I 4 C 0
s Bison_bison.KN264915.1                                   302079 34 -   6870073 tctgaTT---------AATGTA-----T--GTTTC---TTAC--TA-TC-TAG-------------------A-C-A-------------------A
i Bison_bison.KN264915.1                                I 4 C 0
s Bos_indicus.CM003021.1                                 22956177 34 + 161108492 tctgaTT---------AATGTA-----T--GTTTC---TTAC--TA-TC-TAG-------------------A-C-A-------------------A
i Bos_indicus.CM003021.1                                I 4 C 0
s Bos_mutus.JH883513.1                                     418442 34 +    998990 tctgaTT---------AATGTA-----T--GTTTC---TTAC--TA-TC-TAG-------------------A-C-A-------------------A
i Bos_mutus.JH883513.1                                  I 4 C 0
s Bos_taurus.CM000177.6                                  22664831 34 + 158972876 tctgaTT---------AATGTA-----T--GTTTC---TTAC--TA-TC-TAG-------------------A-C-A-------------------A
i Bos_taurus.CM000177.6                                 I 4 C 0
s Bubalus_bubalis.KI419065.1                               674594 35 +   1914593 tctgaTT---------AATGTA----AT--GTTTC---TTAC--TA-TC-TAG-------------------A-C-A-------------------A
i Bubalus_bubalis.KI419065.1                            I 4 C 0
s Cacajao_ayresi.k141_724503                               117758 30 -    171031 TCT-------------AATATA-----A--TTTCC---TTAC--AA-TT-TAG-------------------A-T-A-------------------G
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 16778 30 +    125063 TCT-------------AATATA-----A--TTTCC---TTAC--AA-TT-TAG-------------------A-T-A-------------------G
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                18825 30 -    216513 TCT-------------AATATA-----A--TTTCC---TTAC--AA-TT-TAG-------------------A-T-A-------------------G
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       11368 30 -    134917 TCT-------------AATATA-----A--TTTCC---TTAC--AA-TT-TAG-------------------A-T-A-------------------G
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3223114 19 -   8989139 -------------------------------TTTC---TTAC--CA-CT-TAG-------------------A-C-A-------------------a
i Camelus_bactrianus.KN276303.1                         I 13 C 0
s Camelus_dromedarius.KN271192.1                           400815 19 -  15254737 -------------------------------TTTC---TTAC--CA-CT-TAG-------------------A-C-a-------------------a
i Camelus_dromedarius.KN271192.1                        I 13 C 0
s Camelus_ferus.KB016973.1                                2976552 19 +   6889770 -------------------------------TTTC---TTAC--CA-CT-TAG-------------------A-C-a-------------------a
i Camelus_ferus.KB016973.1                              I 13 C 0
s CanFam4.chr31                                          11526302 31 +  39901454 TCTG-TT--T------AATAGA-----A--TTTG------AC--TA-TT-TAG-------------------A-C-A-------------------A
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   21276 31 +     87036 TCTG-TT--T------AATAGA-----A--TTTG------AC--TA-TT-TAG-------------------A-C-A-------------------A
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11272985 31 -  35597290 TCTG-TT--T------AATAGA-----A--TTTG------AC--TA-TT-TAG-------------------A-C-A-------------------A
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11095696 31 +  39895921 TCTG-TT--T------AATAGA-----A--TTTG------AC--TA-TT-TAG-------------------A-C-A-------------------A
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16462481 31 -  44759192 TCTG-TT--T------AATAGA-----A--TTTG------AC--TA-TT-TAG-------------------A-C-A-------------------A
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21330553 34 + 157394656 tctG----AT----T-AATGTA-----T--GTTTC---TTAC--TA-TC-TAG-------------------C-C-a-------------------a
i Capra_aegagrus.CM003214.1                             I 4 C 0
s Capra_hircus.CM004562.1                               135711770 34 - 157403528 tctG----AT----T-AATGTA-----T--GTTTC---TTAC--TA-TC-TAG-------------------C-C-A-------------------A
i Capra_hircus.CM004562.1                               I 4 C 0
s Carlito_syrichta.NW_007248099.1                          313496 34 +    345090 TCTG-TT----C----ACCATA-----C--TTTTC---TTAC--TA-TT-tag-------------------a-t-a-------------------a
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               61714 34 +     67245 TCTG-TT----C----AACATA-----A--TTTTC---TTAC--TA-TT-TAG-------------------A-C-A-------------------A
i Carollia_perspicillata.CarPer_scaffold_4436           I 6 C 0
s Castor_canadensis.CasCan_scaffold_417865                    141 34 -       402 TGTG-TT--T------AATATA-----A--TTTTC---TTAC--TA-TT-TAG-------------------A-C-A-------------------A
i Castor_canadensis.CasCan_scaffold_417865              C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   162627 20 -    276539 -------------------------------TTTC---TTAT--TACTT-TAG-------------------A-T-A-------------------A
i Catagonus_wagneri.CatWag_scaffold_1305                I 8 C 0
s Cavia_aperea.AVPZ01000278.1                            15789629 34 -  24422027 TCTGCTT---------AGTaca-----a--ttttc---ttaa--ta-tt-tag-------------------a-c-A-------------------A
i Cavia_aperea.AVPZ01000278.1                           I 17 C 0
s Cavia_porcellus.DS562889.1                             15801568 34 -  24440124 TCTGCTT---------AGTaca-----a--ttttc---ttaa--ta-tt-tag-------------------a-c-A-------------------A
i Cavia_porcellus.DS562889.1                            I 17 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       179740 34 +    436027 TCTGCTT---------AGTACA-----A--TTTTC---TTAA--TA-TT-TAG-------------------A-C-A-------------------A
i Cavia_tschudii.CavTsc_scaffold_488                    I 17 C 0
s Cebus_albifrons.Contig22                               18895483 30 -  29618158 TCT-------------AAAATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Cebus_albifrons.Contig22                              I 905 I 3
s Cebus_olivaceus.k141_93739                                12132 30 -     26817 TCT-------------AAAATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Cebus_olivaceus.k141_93739                            C 0 I 3
s Cebus_unicolor.k141_239009                                16376 30 +     25043 TCT-------------AAAATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Cebus_unicolor.k141_239009                            C 0 I 3
s Cephalopachus_bancanus.k141_702587                        12511 34 +     21754 TCTG-TT----C----ACCATA-----C--TTTTC---TTAC--TA-TT-TAG-------------------a-t-a-------------------a
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4367532 34 +   7569818 tct---------gtttaatata-----a--ttttc---ttac--ta-TT-TAG-------------------A-C-A-------------------A
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         7289 34 -      9338 TCTG-TT--T------AATATA-----A--TTTTC---TTAC--TA-TT-TAG-------------------A-C-A-------------------A
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6559320 30 +   6739814 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      30797 30 +     60454 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          6001 30 -     21101 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         63311 30 -    107033 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        6174 30 -     17608 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          3339 30 +     45019 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           3399 30 +     15177 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          6221 30 +     16677 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           28411 30 +     35983 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11994942 30 +  12117833 TCT-------------AATACA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46481703 30 +  46592721 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      45252 30 -     45581 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Cercopithecus_neglectus.k141_2078027                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       6235 30 +     35577 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        6029 30 -     25661 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        5986 30 -     17744 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        25570 30 +     37128 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           4544 25 -      6963 ------------------CACA-----A--TTTCT---TCAC--TA-TT-TAG-------------------A-C-A-------------------A
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           63131 34 -     68416 TCTG-TT--T------AATACA-----A--TTTTC---TTAC--TA-TT-TGG-------------------A-T-A-------------------A
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                           12237 34 +     13308 TCTG-TT--T------AATACA-----A--TTTTC---TTAC--TA-TT-TGG-------------------A-T-A-------------------A
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             9416 30 -     18223 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              1155 30 +    188999 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           45453 30 +     57117 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          50133 30 +     54541 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15964314 34 +  43084221 TCTG-T-G-T------AATACA-----A--TCTTC---TTAG--TA-TG-TAG-------------------G-C-A-------------------A
i Chinchilla_lanigera.JH721867.1                        I 17 I 3
s Chiropotes_israelita.k141_1189915                         74937 30 +    196370 TCT-------------AATATA-----A--TTTCC---TTAC--AA-TT-TAG-------------------A-T-A-------------------G
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          19118 30 +     40510 TCT-------------AATATA-----A--TTTCC---TTAC--AA-TT-TAG-------------------A-T-A-------------------G
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15143755 30 -  15256731 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      38219 30 -     53260 TCT-------------GATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101148778 30 + 101219884 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                18642 34 -     21363 TCT-----AT----TAAATGTA-----A--TTTTC---TTAC--TA-TT-TAA-------------------A-C-A-------------------A
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           763946 34 +    964067 TCT-----A--C--TAAATGTA-----A--TTTTC---TTAC--TA-TT-TAA-------------------A-C-A-------------------A
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_629495              2182 69 -      3120 TCTG-TT--T------AACATA-----A--TTTTC---TTAC--AA-TT-TACA-TA-AAATCCTTATTAT-T-A-AAAATCTTGATTTTCTTAGAA
i Chrysochloris_asiatica.ChrAsi_scaffold_629495         I 19 C 0
s Condylura_cristata.JH655880.1                          60622152 28 +  78930452 TCTG-TT--T------Catgta-----g--ttttc---ttat--t---t-tag--------------------------------------------
i Condylura_cristata.JH655880.1                         C 0 I 3
s Cricetomys_gambianus.CriGam_scaffold_949                 282601 34 -    399297 TGTG-TT--T------AGTATC-----A--TGTTC---TTGC--TA-TT-TAT-------------------A-C-A-------------------T
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53034969 34 +  72327488 TGTGCTT---------AATGCC-----A--TGTCC---TGGC--TA-TT-TAT-------------------A-C-A-------------------T
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              1562 30 -     22648 TCT-----AT----TTAGTATA-----A--TACCC---TTAC--TA-TT-TAG--------------------------------------------
i Crocidura_indochinensis.CroInd_scaffold_27484         I 3 I 3
s Cryptoprocta_ferox.CryFer_flattened_line_19014            57452 34 -     70449 TCTG-TT--T------AACATC-----A--TTTTC---TTAC--TA-TT-TAG-------------------A-C-A-------------------A
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                20801 34 +     26546 TCTG-TT--T------AGTACA-----G--TTTTC---TTAA--TA-TT-TAG-------------------A-C-C-------------------A
i Cuniculus_paca.CunPac_flattened_line_16637            I 17 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             61941 34 -    236241 TCTG-TT--T------AGTACA-----A--TTTTC---TTAA--TA-TT-TTG-------------------A-C-C-------------------A
i Dasyprocta_punctata.DasPun_flattened_line_634         I 17 C 0
s Dasypus_novemcinctus.JH568778.1                          185618 32 -   6883506 TCT-----AT-C--T-AAT--A-----A--GATTC---TTAC--TA-TT-TAT-------------------A-G-G-------------------A
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16849066 34 +  31942871 TCTG-TT--T------AATATA-----A--TTTTC---TAAT--TA-TT-TAG-------------------A-T-A-------------------A
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80040580 34 -  96802777 TCTG-TT--T------AAtata-----c--ttttc---ttat--ta-tt-tag-------------------a-C-A-------------------A
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18701143 34 -  18957592 GCTG-TT----C----AACATA-----A--TTTTC---TTAC--TA-TT-TAG-------------------A-C-A-------------------A
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 326179 34 +    993696 Tct---------gtttaatata-----a--ttttc---ttac--tA-TT-TAG-------------------A-C-A-------------------A
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   6820 34 +    151128 TCTG-TT--T------AATATA-----A--TTTTC---TTAC--TA-TT-TAG-------------------A-C-A-------------------A
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   159576 34 +    228994 TCC-----AT----TTAATGCA-----A--TCTTC---ATAG--CA-TT-TAG-------------------A-C-C-------------------A
i Dinomys_branickii.DinBra_scaffold_1996                I 17 I 3
s Dipodomys_ordii.KN672545.1                              3660133 34 +   4240102 tct---------gtttaatata-----a--ttttg---ataC--TA-TT-TGG-------------------A-T-A-------------------A
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  2481 34 -     11986 TCTG-TT--T------AATATA-----A--TTTTG---ATAC--TA-TT-TGG-------------------A-T-A-------------------A
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                39905 37 -     73477 TCTGCTT---------AGTACA-----A--TTTTCATTTTAA--TA-TT-TAG-------------------A-C-C-------------------A
i Dolichotis_patagonum.DolPat_scaffold_14102            I 17 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1496151 34 +   1727528 tctgaTT---------CATGTA-----T--GTTTC---TTAC--TA-CC-TAG-------------------A-C-A-------------------A
i Elaphurus_davidianus.JRFZ01086400.1                   I 4 C 0
s Elephantulus_edwardii.JH947210.1                        7831312  3 +  15467074 --------------------------------------------------tat--------------------------------------------
i Elephantulus_edwardii.JH947210.1                      I 1277 I 1663
s Ellobius_lutescens.LOEQ01003611.1                        243766 34 -    369425 TGTG-TT--T------AATACC-----A--TGGTC---TTGC--TA-TT-TAT-------------------C-C-A-------------------A
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Enhydra_lutris.KZ291749.1                              85877433 22 +  99434291 Tct---------gtttaatata-----a--ttttc---tta--------------------------------------------------------
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4708900 34 +   6522550 TCCG-TT----C----AATATA-----A--TTTTC---TTAC--TA-GT-TAG-------------------A-C-A-------------------A
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5856545 34 -   7175178 Tct---------gtttaatata-----a--ttttc---ttac--ta-CT-TAG-------------------A-C-A-------------------A
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13355045 34 +  41866177 Tct---------gtttaatata-----a--ttttc---ttac--ta-CT-TAG-------------------A-C-A-------------------A
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          16535 34 +     92910 Tct---------gtttaatata-----a--ttttc---ttac--ta-CT-TAG-------------------A-C-A-------------------A
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11541285 29 +  16010500 TCT-CTT----C----AATGTC-----A--TTTCC---TGAC--TA-TA-GA---------------------------------------------
i Erinaceus_europaeus.JH835290.1                        C 0 I 3
s Erythrocebus_patas.Contig8                             48780788 30 -  48907691 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          318800 34 +    330699 TCTG-TT--T------AATATA-----T--TTTTC---TTAT--TA-TT-TAG-------------------A-C-A-------------------A
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             65257 34 +     89355 TCTG-TT--T------AATATA-----T--TTTTC---TTAT--TA-TT-TAG-------------------A-C-A-------------------A
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              9218 34 +     13586 TCTG-TT--T------AATACA-----G--TTTCC---TTAT--TA-TC-TGG-------------------A-T-A-------------------A
i Eulemur_albifrons.k141_715837                         I 56 C 0
s Eulemur_collaris.k141_1015201                              2481 34 -      4292 TCTG-TT--T------AATATA-----G--TTTCC---TTAT--TA-TC-TGG-------------------A-T-A-------------------A
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            15614 34 +     36558 TCTG-TT--T------AATACA-----G--TTCCC---TTAT--TA-TC-TGG-------------------A-T-A-------------------A
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            11939 34 +     60246 TCTG-TT--T------AATACA-----G--TTTCC---TTAT--TA-TC-TGG-------------------A-T-A-------------------A
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                15422 34 +    109717 TCTG-TT--T------AATATA-----G--TTTCC---TTAT--TA-TC-TGG-------------------A-T-A-------------------A
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 3407 34 -     19505 TCTG-TT--T------AATACA-----G--TTTCC---TTAT--TA-TC-TGG-------------------A-T-A-------------------A
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                20079 34 +     27497 TCTG-TT--T------AATACA-----G--TTTCC---TTAT--TA-TC-TGG-------------------A-T-A-------------------A
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           22535 34 +     26808 TCTG-TT--T------AATACA-----G--CTTCC---TTAT--TA-TC-TGG-------------------A-T-A-------------------A
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                37270 34 +     46535 TCTG-TT--T------AATACA-----G--TTTCC---TTAT--TA-TC-TGG-------------------A-T-A-------------------A
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              20009 34 -     29447 TCTG-TT--T------AATATA-----G--TTTCC---TTAT--TA-TC-TGG-------------------A-T-A-------------------A
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.AANG03133801.1                                  505 34 -       736 TCTG-TT-A-------AACATC-----A--TTTTC---ATAC--TA-TT-TAG-------------------A-C-A-------------------A
i Felis_catus.AANG03133801.1                            C 0 C 0
s Felis_catus_fca126.CM031420.1                         129285861 34 - 158578461 TCTG-TT-A-------AACATC-----A--TTTTC---ATAC--TA-TT-TAG-------------------A-C-A-------------------A
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 26960 34 +     52776 TCTG-TT-A-------AACATC-----A--TTTTC---ATAC--TA-TT-TAG-------------------A-C-A-------------------A
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13896087 34 -  19261668 TCT-CT--------ttggtata-----a--ttttc---tttc--ta-tt-tag-------------------c-A-C-------------------A
i Fukomys_damarensis.KN123630.1                         I 13 C 0
s Galago_moholi.ctg555                                     215270 34 -    847004 TCTG-TT--T------AACATA-----A--TTTTC---CAAT--TA-TT-TAG-------------------A-T-A-------------------A
i Galago_moholi.ctg555                                  C 0 I 3
s Galago_senegalensis.k141_964197                           17631 34 -     43889 TCTG-TT--T------AACATA-----A--TTTTC---CAAT--TA-TT-TAG-------------------A-T-A-------------------A
i Galago_senegalensis.k141_964197                       C 0 I 3
s Galagoides_demidoff.k141_1769638                          14776 34 +     27357 TCTG-TT--T------AATATA-----A--TTTTC---CAAT--TA-TT-TAG-------------------G-T-A-------------------A
i Galagoides_demidoff.k141_1769638                      C 0 I 3
s Galeopterus_variegatus.GalVar_scaffold_354               159517 34 +    324696 TGTG-TT--T------AACATA-----A--ATTCC---TTAC--TA-TT-TAG-------------------A-C-A-------------------A
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    185949 34 -    189561 tctgaT-G--------AATGTA-----T--GTTTC---TTAC--TA-TC-TAG-------------------A-C-A-------------------A
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 4 C 0
s Glis_glis.GliGli_scaffold_79770                           16412 34 -     18683 TCT-----AT----TTAACATA-----A--TTTTC---TTAC--TA-TT-TAG-------------------A-C-A-------------------A
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               9204 30 -     14630 TCT-------------AATATA-----A--TTTAG---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119656304 30 - 195582420 TCT-------------AATATA-----A--TTTAG---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   79729 34 +    118900 TCTG-TT--T------CAAATA-----A--TTTTC---TTAC--TG-TT-TAG-------------------A-T-A-------------------A
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         6001 34 +     10286 TCTG-TT--T------AATACA-----A--TTTTC---TTAT--TA-TC-TGG-------------------A-T-A-------------------A
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             4479 34 -     11661 TCTG-TT--T------AATACA-----A--TTTTC---TTAT--TA-TC-TGG-------------------A-T-A-------------------A
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             9806 34 +     56096 TCTG-TT--T------AATACA-----A--TTTTC---TTAT--TA-TC-TGG-------------------A-T-A-------------------A
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        33055 34 -     42470 TCTG-TT--T------AATACA-----A--TTTTC---TTAT--TA-TC-TGG-------------------A-T-A-------------------A
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        49678 34 -     54384 TCTG-TT--T------AATACA-----A--TTTTC---TTAT--TA-TC-TGG-------------------A-T-A-------------------A
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              22593 34 +     53719 TCTG-TT--T------AACATC-----A--TTTTC---TTAC--TA-TT-TAG-------------------A-A-A-------------------A
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                32820 34 -     91191 TCTG----AT----T-AATGTA-----T--GTTTC---TTAC--TA-TC-TAG-------------------A-C-A-------------------A
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 4 C 0
s Heterocephalus_glaber.JH602058.1                        2560578 34 +  31725842 TCTG-TT--T------Agtata-----a--ttttc---ttcc--ta-tt-tag-------------------c-C-C-------------------A
i Heterocephalus_glaber.JH602058.1                      I 27 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               62820 33 +     73687 TTTG-TT--T------AATATA-----A--TT-TG---TTGT--GA-TT-TAT-------------------A-T-A-------------------A
i Heterohyrax_brucei.HetBruBak_scaffold_25354           I 20 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              150583 34 +    277961 TCTG-TT--T------AATATA-----T--TTTTC---TTAT--TA-TT-TAG-------------------A-C-A-------------------A
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001052.1                      277074 32 -    479840 TCTG-TT----C----AATATA-----A--T--TC---TTAC--TA-TT-TAG-------------------A-C-A-------------------A
i Hipposideros_armiger.JXIK01001052.1                   I 55 I 120
s Hipposideros_galeritus.HipGal_scaffold_7653                5546 32 +     86108 TCTG-TT----C----AATATA-----A--T--TC---TTAC--TA-TT-TAG-------------------A-C-A-------------------A
i Hipposideros_galeritus.HipGal_scaffold_7653           I 49 I 13
s Hoolock_leuconedys.ctg315                                   350209 30 +    431944 TCT-------------AATATA-----A--TCTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Hoolock_leuconedys.ctg315                                I 56 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 23061 35 -     67322 TCTG-T-----C--T-AACATC-----A--TTTTC---TTAC--TA-TT-CAT-------------------ACC-A-------------------A
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           21193 34 -    119109 TCTG-TT--T------AGTACA-----A--TTTTC---TTAA--TA-TT-TAG-------------------A-C-A-------------------A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       I 17 C 0
s Hylobates_abbotti.k141_1816750                             1690 30 +      3202 TCT-------------AATATA-----A--TCTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1633646                              1660 30 -      2102 TCT-------------AATATA-----A--TCTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Hylobates_agilis.k141_1633646                         C 0 C 0
s Hylobates_klossii.k141_468230                              3177 30 +      5464 TCT-------------AATATA-----A--TCTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14628525 30 -  25970782 TCT-------------AATATA-----A--TCTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            1076 30 +      4161 TCT-------------AATATA-----A--TCTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             37386 30 -     60944 TCT-------------AATATA-----A--TCTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7130321 36 +  13083262 tct---------gtttaatatatatata--t---t---ttac--ta-tt-tag-------------------a-C-A-------------------A
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   1478 34 +      3484 TCTG-TT--T------AATATA-----A--TCTTC---TTAT--TA-TT-TGG-------------------A-T-A-------------------A
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              12792 34 +     17520 TCTG-TT--T------AATATA-----T--TTTTC---TTAT--TA-TT-TAG-------------------A-C-A-------------------A
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               27413 34 +     37189 TCTG-TT--T------AATATA-----C--TTTTC---TTAT--TA-TT-TAG-------------------A-C-A-------------------A
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 I 3
s Lagothrix_lagothricha.k141_12968                          53973 30 -    147782 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------G
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    5512 34 +     26176 TTTG-TT----C----AATATA-----A--TTTTC---TTAC--TA-GT-TAG-------------------A-C-A-------------------A
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258411353 34 - 285822530 TCTG-TT--T------AATACA-----A--TTTTC---TTAT--TA-TC-TGG-------------------A-T-A-------------------A
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        28657 43 +     39228 TCTGCTTGATACAATTAATACA-----A--TTTTC---TTAT--TA-TT-TGG-------------------A-T-A-------------------C
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            58021 43 +     63517 TCTGCTTGATACAATTAATACA-----A--TTTTC---TTAT--TA-TT-TGG-------------------A-T-A-------------------C
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        36401 43 -     38897 TCTGTTTGATACAATTAATACA-----A--TTTTC---TTAT--TA-TT-TGG-------------------A-T-A-------------------C
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      2447 43 -     13103 TCTGCTTGATACAATTAATACA-----A--TTTTC---TTAT--TA-TT-TGG-------------------A-T-A-------------------C
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3091396 34 -   3498232 TCTG-TT--T------AACATA-----A--TTTTC---TTAC--TA-TT-TAG-------------------A-C-A-------------------A
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    20819 34 +     22452 TATG-TT--T------CACATA-----A--TTTCA---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            139726 34 +   3060487 tct---------gtttaatata-----t--ttttc---ttat--ta-tt-tag-------------------a-C-A-------------------A
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19252409 30 +  19376315 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           15220 34 +     84689 TCTG-TT--T------AATAGA-----A--TTTTC---TAAT--TC-TT-TAG-------------------A-T-A-------------------T
i Loris_lydekkerianus.k141_550999                       C 0 I 4
s Loris_tardigradus.ctg97                                 3782959 34 +   6799190 TCTG-TT--T------AATATA-----A--TTTTC---TAAT--TC-TT-TAG-------------------A-T-A-------------------T
i Loris_tardigradus.ctg97                               C 0 I 4
s Loxodonta_africana.GL010040.1                          20598744 36 -  62548349 TCTG-TT--T------ACTATA-----ATATTTTC---TTAC--AA-TA-TAT-------------------A-C-A-------------------A
i Loxodonta_africana.GL010040.1                         I 17 C 0
s Lycaon_pictus.CM007556.1                               11095152 31 +  39895028 TCTG-TT--T------AATAGA-----A--TTTG------AC--TA-TT-TAG-------------------A-C-A-------------------A
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             24160 30 +     74745 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12710621 30 +  12821369 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                3194 30 -     26467 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           51065 30 +     63263 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 3175 30 -     26361 TCT-------------CATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 6365 30 -      7381 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  49594 30 -     79256 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196039692 30 + 196197964 TCT-------------CATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11449862 30 +  11645122 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   8548 30 -     46448 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                6211 30 -     13212 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 19891 30 -     55006 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43845006 30 +  43892939 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               21175 30 -     24607 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               8545 30 -     27140 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43441581 30 -  43563597 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4454385 30 -   4543643 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            152158 34 +    252755 TCTG-T--AT------AATATA-----A--TTTTC---TTAC--TA-TT-TAG-------------------A-C-A-------------------A
i Manis_javanica.JSZB01003966.1                         C 0 I 3
s Manis_pentadactyla.KN017078.1                             39747 35 +     58827 TCt---------gtataatata-----a--ttttc---ttac--ta-ttttag-------------------A-C-A-------------------A
i Manis_pentadactyla.KN017078.1                         C 0 I 3
s Marmota_marmota.CZRN01000005.1                         36878190 39 +  64221397 tct---------gtttaatatatatata--tatat---ttac--ta-tt-tag-------------------a-C-A-------------------A
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       65549 32 -    234502 CTT-CTT----C----AATATA-----A--T--TC---TCAC--CA-TT-TAG-------------------A-C-A-------------------A
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             6315 24 -     87323 TCTG-TT----C----AATATA-----A--TTTTC---TTAC--T----------------------------------------------------
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 I 6
s Meriones_unguiculatus.MerUng_scaffold_9483                 1218 34 +    115071 TGTG-TT--T------AAAAGC-----A--TGTTG---TTGC--TA-TT-TAT-------------------A-C-A-------------------T
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1051488 34 -  26018355 TGTG-TT--T------AATACT-----A--TGATC---TTGC--TA-TC-GAT-------------------A-G-A-------------------T
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    2383 34 -     12939 TCTG-TT--T------CATATA-----T--TTTTC---TTAT--TA-TT-TAG-------------------A-C-A-------------------A
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16514414 34 +  47401472 TCTG-TT--T------AATGca-----g--ttttc---ttgc--tt-tt-tgg-------------------a-T-A-------------------A
i Microcebus_murinus.CM007691.1                         C 0 I 4
s Microgale_talazaci.MicTal_scaffold_34660                  41412 63 -     48017 AGTGCTT---------AATATA-----A--TTTTC---TTATGAAA-TT-TATAAGACAAATA-TTAAAATTT-C-A----C---ATT--CT-ATAA
i Microgale_talazaci.MicTal_scaffold_34660              I 19 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               24890 34 -     32043 TCTGCT-----C----AACATA-----A--TCTTC---TTAC--TG-TT-TAG-------------------A-C-A-------------------G
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22824570 34 -  98408828 TGTG-TT--T------AATACC-----A--TGGTC---TTAC--TA-TT-TAT-------------------A-C-A-------------------T
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8212948 34 +  10048721 TCTGCT-----C----AGTATA-----A--TTGTC---TTAC--TA-TT-TAG-------------------G-C-A-------------------A
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            37438 33 +     45743 TCTGCT-----C-----GTATA-----A--TTGTC---TTAC--TA-TT-TAG-------------------A-C-A-------------------A
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         6127 30 +     29742 TCT-------------AATATA-----A--TTTTC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        16892 34 -    104932 TCTG-TT--T------AACATA-----A--TTTTC---TTAC--TA-TT-TAG-------------------A-C-A-------------------A
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     5096 34 -     12809 TCTG-TT--T------AATACA-----G--TTTTC---TTGC--TG-TT-TGG-------------------A-T-A-------------------A
i Mirza_zaza.k141_593947                                C 0 I 4
s Monodon_monoceros.MonMon_M_scaffold_5598                 150173 34 +    154973 TCTG-TT--T------AATATA-----T--TTTTC---TTAT--TA-TT-TAG-------------------A-C-A-------------------A
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                163428 34 +    265003 TCTG-TT----C----AATATA-----A--TTTTC---TAAC--CA-TT-TAG-------------------A-C-A-------------------A
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  6169 34 -     19904 CCTG----AT----T-AATGTA-----T--GTTTC---TTAC--TA-TT-TAG-------------------A-C-A-------------------A
i Moschus_moschiferus.MosMos_scaffold_78805             I 4 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  150268 34 -    168139 TCTG-TT--T------AACATC-----A--TTTTC---TTAC--TA-CT-TAG-------------------A-C-A-------------------A
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          24362 34 -    100666 TCTG-TT----C----AATATA-----A--TTTTC---TTAG--TG-GT-TAG-------------------A-C-A-------------------A
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70771788 34 +  92629107 TGC-----AT----TTAATATC-----A--TGTTC---TTAC--TA-TT-AAT-------------------A-A-A-------------------T
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75493842 34 +  98207768 TGC-----AT----TTAATATC-----A--TGTTC---TTGC--TA-TT-AAT-------------------A-A-A-------------------T
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67560594 34 +  89017189 TGC-----AT----TTAATATC-----A--TGTTC---TTGC--TA-TT-AAT-------------------A-A-A-------------------T
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74336568 34 +  97876770 TGC-----AT----TTAATTTC-----A--TGTTC---TTGC--TA-TT-AAT-------------------A-A-A-------------------T
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             14817 31 +     98495 TCTG-TT--T------CACATA-----A--TTT------TAC--CA-TT-TAG-------------------A-C-A-------------------A
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4428154 24 -  28371801 TCTG-TT--T------AATATA-----A--TCTTC---TTAC--T----------------------------------------------------
i Mustela_putorius.JH417978.1                           C 0 I 6
s Myotis_brandtii.KE161952.1                               971234 34 +   8389877 TCTG-TT----C----AATATA-----A--TTTTC---TTAC--TA-GT-TAG-------------------A-C-A-------------------A
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5022655 34 +   6462685 TCTG-TT----C----AACATA-----A--TTTCC---TTAC--TA-GT-TAG-------------------A-C-A-------------------A
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3468738 34 -   3747815 TCTG-TT----C----AATATA-----A--TTTTC---TTAC--TA-GT-TAG-------------------A-C-A-------------------A
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        13979 34 +     66751 TCTG-TT----C----AATATA-----A--TTTTC---TTAC--TA-GT-TAG-------------------A-C-A-------------------A
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             7592 34 -      8794 TCTG-TT--T------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-C-A-------------------A
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            120323 31 +    362372 TTT-----A-------ATCATC-----A--TTTTC---TTAC--TA-TT-TAT-------------------A-T-C-------------------A
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4490290 34 -  14209539 TCTG-TT--T------AAcata-----a--ttttc---ttac--ta-tt-tag-------------------a-c-a-------------------a
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3954764 34 -   4490290 tct---------gtttaatata-----t--ttttc---ttat--ta-tt-tag-------------------a-C-A-------------------A
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  50492 29 +     94413 C---C-----------AATATA-----A--TTTTC---TTAC--TA-TT-TAG-------------------A-C-A-------------------A
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1817463                            816 30 -      1070 TCT-------------AATATA-----A--TCTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Nomascus_annamensis.k141_1817463                      C 0 I 32
s Nomascus_concolor.k141_70405                                815 30 +      1153 TCT-------------AATATA-----A--TCTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Nomascus_concolor.k141_70405                          I 55 I 13
s Nomascus_gabriellae.k141_1400361                            746 30 -      2203 TCT-------------AATATA-----A--TCTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_1022                             770 30 -     11638 TCT-------------AATATA-----A--TCTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Nomascus_siki_b.tarseq_1022                       C 0 C 0
s Nomascus_siki_a.k141_1035055                                 3402 30 -      3602 TCT-------------AATATA-----A--TCTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Nomascus_siki_a.k141_1035055                            I 220 n 30
s Nyctereutes_procyonoides.CAJHUB010000786.1                38017 31 +   3668941 TCTG-TT--T------AATAGA-----A--TTTG------AC--TA-TT-TAG-------------------A-C-A-------------------A
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65571783 34 -  95554990 TCTG-TT--T------AATATA-----A--TTTTC---TAAT--TA-TT-TAG-------------------G-T-A-------------------A
i Nycticebus_bengalensis.LG16                           C 0 I 4
s Nycticebus_coucang.k141_771591                            15192 34 +     16181 TCTG-TT--T------AATATA-----A--TTTTC---TAAT--TA-TT-TAG-------------------G-T-A-------------------A
i Nycticebus_coucang.k141_771591                        C 0 I 4
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65679979 34 +  89412551 TCTG-TT--T------aatata-----a--ttttc---taat--ta-tt-tag-------------------g-t-a-------------------a
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 I 4
s Odobenus_rosmarus.KB229369.1                             684993 34 -   3126709 TCTG-TT--T------AACATA-----A--TTTTC---TTAC--TA-TT-TAG-------------------A-C-A-------------------A
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1083601 34 +   1425656 tctgaT-G--------AATGTA-----T--GTTTC---TTAC--TA-TC-TAG-------------------A-C-A-------------------A
i Odocoileus_virginianus.KZ101650.1                     I 4 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         41684 34 +     78940 tctgaTT---------AATGTA-----T--GTTTC---TTAC--TA-TC-TAG-------------------A-C-A-------------------A
i Okapia_johnstoni.LVCL01S0017931.1                     I 4 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  130366 34 +    145789 TGTG-TT--T------AATACC-----A--TGGTC---TTGC--TG-TT-TAT-------------------A-C-A-------------------T
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  43059 34 +     62360 TGTG-TT--T------AGTACC-----A--TGTTC---TTAC--TA-TG-TAT-------------------A-C-A-------------------T
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7228439 34 -   7562323 tct---------gtttaatata-----t--ttttc---ttat--ta-tt-tag-------------------a-c-A-------------------A
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              64214 34 -     66828 TCTG-TT--T------AATATA-----A--TTTTA---TTAT--AA-TT-TAT-------------------T-C-A-------------------A
i Orycteropus_afer.OryAfe_flattened_line_13509          I 19 C 0
s Oryctolagus_cuniculus.CM000803.1                      141883834 34 + 163896628 TGTG-TT--T------CATATA-----A--TTTCA---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      315155 31 -    505867 TCTG-TT--T------AACAGA-----A--TTTG------AC--TA-TT-TAG-------------------A-C-A-------------------A
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        5132 34 -     53940 TCTG-TT--T------AATATA-----A--TTTTC---CAAT--TA-TT-TAG-------------------A-T-A-------------------A
i Otolemur_crassicaudatus.k141_505435                   C 0 I 3
s Otolemur_garnettii.GL873528.1                          18013105 34 -  38779656 Tct---------gtttaatata-----a--ttttc---caat--TA-TT-TAG-------------------A-T-A-------------------A
i Otolemur_garnettii.GL873528.1                         C 0 I 3
s Ovis_aries.CM001582.2                                 134082606 34 - 275406953 tctG----AT----T-AATGTA-----T--GTTTC---TTAC--TA-TC-TAG-------------------A-C-A-------------------A
i Ovis_aries.CM001582.2                                 I 4 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      83841 34 +    140051 TCTG----AT----T-AATGTA-----T--GTTTC---TTAC--TA-TC-TAG-------------------A-C-A-------------------A
i Ovis_canadensis.OviCan_scaffold_6251                  I 4 C 0
s Pan_paniscus.CM003386.1                               127578483 30 - 205426864 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120155643 30 - 196562556 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  39880 34 +    295523 TCTG-TT-A-------AACATC-----A--TTTTC---ATAC--TA-TT-TAT-------------------A-C-A-------------------A
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3643695 34 +  18214204 TCTG-TT-A-------AACATC-----A--TTTTC---ATAC--TA-TT-TAT-------------------A-C-A-------------------A
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5033343 34 -   6340057 TCTG-TT-A-------AACATC-----A--TTTTC---ATAC--TA-TT-TAT-------------------A-C-A-------------------A
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1071482 34 -   1292953 tctG----AT----T-AATGCA-----T--GTTTC---TTAT--TA-TC-TAG-------------------A-C-A-------------------A
i Pantholops_hodgsonii.KE114631.1                       I 4 C 0
s Papio_anubis.CM001492.2                               188160370 30 - 188283584 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              3460 30 +     25005 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47517742 30 +  47705337 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 71733 30 -    104429 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   10265 30 +     14967 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 6130 30 -      7628 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    121370 34 -    135482 TCTG-TT--T------AATATC-----A--TTTTC---TTAC--TA-TT-TAG-------------------A-C-A-------------------A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          10801 32 -     23713 TCTG-TT--T------AATATA-----A--TTTTC---TAAT--TA-TT-TAG-------------------A-T----------------------
i Perodicticus_ibeanus.k141_117958                      C 0 I 1
s Perodicticus_potto.k141_1136815                           11941 32 +     61070 TCTG-TT--T------AATATA-----A--TTTTC---TAAT--TA-TT-TAG-------------------A-T----------------------
i Perodicticus_potto.k141_1136815                       C 0 I 1
s Perognathus_longimembris.PerPac_flattened_line_19359       2217 34 +     49596 TCTGCTT---------AATATA-----A--TTTTG---ATAC--TA-TT-TGG-------------------A-T-A-------------------A
i Perognathus_longimembris.PerPac_flattened_line_19359  I 13 C 0
s Peromyscus_maniculatus.KI615518.1                       4955423 34 -   8017169 TGTG-TT--T------AGTATC-----A--TGTTC---TTAC--TA-TG-TAT-------------------A-C-A-------------------T
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    17276 34 -     36578 TCTG-TT--T------TGTGTC-----A--TCTTC---TCAT--TA-TT-TAG-------------------A-C-T-------------------A
i Petromus_typicus.PetTyp_scaffold_33007                I 16 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              2905 34 +      8220 TCTG-TT--T------AATATA-----T--TTTTC---TTAT--TA-TT-TAG-------------------A-C-A-------------------A
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            99525 34 +    112873 TCTG-TT-A-------AATATA-----A--TTTTC---TTAC--TA-GT-TAG-------------------A-C-A-------------------A
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           9376 34 +     21690 TCTG-TT--T------AATATA-----T--TTTTC---TTAT--TA-TT-TAG-------------------A-C-A-------------------A
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       26065 30 +     44506 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        26278 30 +     67491 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      16517 30 -     98129 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     26118 30 +    147771 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         2753 30 -     43940 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          6836 30 -     55515 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         26190 30 +    152463 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       3998 30 -    119457 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         15913 30 +    134592 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          26500 30 -     75465 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              191113 30 -    373494 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19811760 30 +  19899266 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                3925 33 -      9567 TTTG-TT--T------AATACA-----A--TT-TG---TTGT--AA-TT-TAT-------------------A-C-A-------------------A
i Procavia_capensis.ProCapCap_scaffold_149274           I 20 C 0
s Prolemur_simus.MPIZ01000048.1                           6852727 34 +  12164890 TCTG-TT--T------AATACA-----A--TTTTC---TTAT--TA-TC-TGG-------------------A-T-A-------------------A
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coronatus.k141_1353159                         7813 34 +     11805 TCTG-TT--T------AATACA-----A--TTTTC---TTAT--TA-TT-TGG-------------------A-T-A-------------------A
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           47148 34 +     52369 TCTG-TT--T------AATACA-----A--TTTTC---TTAT--CA-TT-TGG-------------------A-T-A-------------------A
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         39535 34 -     44753 tct---------gtttaATACA-----A--TTTTC---TTAT--TA-TT-TGG-------------------A-T-A-------------------A
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            21458 34 +     27322 TCTG-TT--T------AATACA-----A--TTTTC---TTAT--CA-TT-TGG-------------------A-T-A-------------------A
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       21106 34 -     53241 TCTG-TT--T------AATACA-----A--TTTTC---TTAT--TA-TT-TGG-------------------A-T-A-------------------A
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         43369 34 -     48185 TCTG-TT--T------AATACA-----A--TTTTC---TTAT--TA-TT-TGG-------------------A-T-A-------------------A
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           38213 34 +     77221 TGTG-TT--T------AATAGC-----A--TGTTG---TTGC--TA-TT-TTT-------------------A-C-A-------------------T
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            6072 34 -     27784 ACTG---------ttcaatata-----a--ttttc---ttat--ta-tt-tag-------------------a-C-A-------------------A
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        250283 24 -    344369 TCTG-TT--T------AATATA-----A--TTTTC---TTAC--T----------------------------------------------------
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 I 6
s Puma_concolor.QAVW01000427.1                          131539991 34 - 161321710 TCTG-TT-A-------AACATC-----A--TTTTC---ATAC--TA-TT-TAG-------------------A-C-A-------------------A
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                20465 34 +     68503 TCTG----AT-----GAATGTA-----T--GTTTC---TTAC--TA-TC-TAG-------------------A-C-A-------------------A
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 4 C 0
s Rattus_norvegicus.chr11                                13917624 34 +  90463843 TGC-----AT----TTAATATC-----A--TGAAC---TTGC--TA-TT-TAT-------------------A-A-A-------------------T
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1792585 32 +   2252614 TCTG-TT----C----AATACA-----A--T--AC---TTAC--TA-TT-TAG-------------------a-c-a-------------------a
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                       875 34 -      4338 TCTG----AT----T-AATGTA-----T--GTTTC---TTAC--TA-CC-TAG-------------------A-C-A-------------------A
i Saiga_tatarica.SaiTat_scaffold_371890                 I 4 C 0
s Saimiri_boliviensis.NW_024100938.1                     15676521 30 -  43202129 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        8434 30 +     34089 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              8374 30 -     60842 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              8468 30 +     67014 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              8445 30 +     60816 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 8382 30 -     76454 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17345169 30 -  30362882 TCT-------------AAAATA-----A--GTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         24490 30 -     62485 TCT-------------AAAATA-----A--GTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   39605 28 -    114521 TCTG-TT--T------AATTTA-----G--TTTTC---TTTC--T---T-TAG--------------------------------------------
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 I 3
s Sigmodon_hispidus.SigHis_scaffold_11332                  104993 34 -    120886 TGTG-TT--T------AATATT-----G--TGTTC---TTGT--TA-TT-TAT-------------------A-A-A-------------------T
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            23527 34 +    739146 TCA-----AT----TTAATAGA-----A--TTTTC---CTAC--TA-TT-TAT-------------------T-C-A-------------------A
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17769982 30 -  27805282 ttt---------atttaatatc-----a--ctTCC---TTAC--TA-TA-TAG--------------------------------------------
i Sorex_araneus.JH798170.1                              I 3 I 4
s Spermophilus_dauricus.KZ294190.1                        2244026 35 +   2842873 tct---------gtttaatatat----a--ttttt---ttac--ta-tt-tag-------------------a-C-A-------------------A
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             238801 21 -    276980 TCTG-TT--T------AATATA-----G--TTT------TAC--T----------------------------------------------------
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 I 5
s Suricata_suricatta.SurSur_flattened_line_20339            33185 34 +     62062 TCTG-TT--T------AACATT-----A--TTTTC---TTAC--TA-TT-TAG-------------------A-C-A-------------------A
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189274981 20 + 218635234 ------------------------------TTTTC---TTAC--TA-TT-CAG-------------------A-C-A-------------------A
i Sus_scrofa.CM000824.4                                 I 3 C 0
s Symphalangus_syndactylus.tarseq_24                        18783 30 -  13920577 TCT-------------AATATA-----A--TCTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                2299 34 +     20549 TCTGCT-----C----AATATA-----A--TTTTC---TTAC--TA-TT-TAG-------------------A-C-A-------------------A
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               17265 34 +     45698 TCTG-TT--T------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-C-A-------------------A
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      810765 32 +   1148477 CCTG-TT--T------AA--CA-----A--TTTTC---TTAC--TA-TT-TAC-------------------A-C-A-------------------A
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  61407 32 +     99546 CCTG-TT--T------AA--CA-----A--TTTTC---TTAC--TA-TT-TAC-------------------A-C-A-------------------A
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               31353 34 +     42269 TCTG-TT----C----ACTATA-----C--TTTTC---TTAC--TA-TT-TAG-------------------a-t-a-------------------a
i Tarsius_lariang.k141_609102                           C 0 C 0
s Tarsius_wallacei.k141_48636                               64662 34 +     65473 TCTG-TT----C----ACTATA-----C--TTTTC---TTAC--TA-TT-TAG-------------------a-t-a-------------------a
i Tarsius_wallacei.k141_48636                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194011903 30 - 194193292 TCT-------------AATATA-----A--TTTCC---TTAC--TA-TT-TAG-------------------A-T-A-------------------A
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                   382 25 -      3104 ------------------CACA-----A--TTTTT---TCAC--TA-TT-TAG-------------------A-C-A-------------------A
i Tolypeutes_matacus.TolMat_scaffold_475685             C 0 I 14
s Tonatia_saurophila.TonSau_scaffold_3334                  138066 34 -    259118 TCTG-TT----C----AACATA-----A--TTTTC---TCAC--TA-TT-TAG-------------------A-C-A-------------------A
i Tonatia_saurophila.TonSau_scaffold_3334               I 15 C 0
s Trichechus_manatus.JH594618.1                          16089824 32 +  31416278 T--G-TT--T------AATATA-----A--TTGTC---TTAC--AA-TT-TAT-------------------A-C-A-------------------A
i Trichechus_manatus.JH594618.1                         I 20 C 0
s Tupaia_chinensis.KB320831.1                             2797733 34 -   3938065 TCTG-T-----C---GAATGTA-----A--CTTTC---TTGC--TA-TT-TAA-------------------A-T-A-------------------A
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    9668 34 +     13056 TCTG-TTG--------AATGTA-----A--CTTTC---TTGC--TA-TT-TAA-------------------A-T-A-------------------A
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69317168 34 -  96451834 tct---------gtttaatata-----t--ttttc---ttat--ta-tt-tag-------------------a-C-A-------------------A
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                      72 28 +    136657 TCTG-TT--T------AATATA-----G--TTTTC---TTAC--T---T-CGG--------------------------------------------
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 I 3
s Ursus_maritimus.KK498671.1                              6520696 34 +  28682327 cct---------gtttaatata-----a--ttttc---ttac--tA-TT-TAG-------------------A-T-G-------------------A
i Ursus_maritimus.KK498671.1                            I 238 C 0
s Varecia_rubra.k141_432109                                  9370 34 -     20643 TCTG-TT--T------AATACA-----A--TTTTC---TTAC--TA-TT-TGG-------------------A-T-A-------------------A
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             28905 34 -     33872 TCTG-TT--T------AATACA-----A--TTTTC---TTAC--TA-TT-TGG-------------------A-T-A-------------------A
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1528222 19 -   2331223 -------------------------------tttc---ttaC--CA-CT-TAG-------------------A-C-A-------------------a
i Vicugna_pacos.KN269600.1                              I 13 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                144382 31 -    281493 TCTG-TT--T------AATAGA-----A--TTTG------AT--TA-TT-TAG-------------------A-C-A-------------------A
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       131522 34 -    134049 tct---------gtttaATATA-----A--TTTTT---TTAC--TA-TT-TAG-------------------A-C-A-------------------A
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        219849 34 -    227762 TCTG-TT--T------AACATA-----A--TTTTC---TTAC--TA-TT-TAC-------------------A-C-A-------------------A
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            1915 34 -     13665 TCTG-TT--T------AATATA-----T--TTTTC---TTAT--TA-TT-TAG-------------------A-C-A-------------------A
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Ochotona_princeps.JH802095.1                            4999348 675 -  23139505 I
e Tragulus_javanicus.TraJav_scaffold_14717                   9488 743 +     90398 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Echinops_telfairi.JH980316.1                           22999931  2 -  44670279 I
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         2161  0 -      5782 C
e Zapus_hudsonius.ZapHud_scaffold_256618                      408  0 -      2259 C
e Jaculus_jaculus.JH725517.1                              8577673  0 +  11848649 C
e Allactaga_bullata.AllBul_scaffold_141108                    666  0 -      7259 C
e Trachypithecus_pileatus.k141_1022309                       5226  0 +     13828 C
e Trachypithecus_phayrei.ctg3                            44662914  0 -  44834318 C
e Trachypithecus_obscurus.k141_1115109                       8130  0 -     28054 C
e Trachypithecus_melamera.k141_699241                        2986  0 -     24393 C
e Trachypithecus_leucocephalus.k141_381681                   3005  0 +     12481 C
e Trachypithecus_laotum.k141_760702                          4719  0 +     14371 C
e Trachypithecus_hatinhensis.k141_504423                     6067  0 -     15592 C
e Trachypithecus_germaini.k141_868450                        3883  0 -     11566 C
e Trachypithecus_geei.k141_670367                           46082  0 -     54611 C
e Trachypithecus_francoisi.k141_768164                       4689  0 -     14244 C
e Trachypithecus_cristatus.k141_1011511                      5261  0 -     12939 C
e Trachypithecus_crepusculus.k141_1588528                   23360  0 -     32910 C
e Trachypithecus_auratus.k141_738098                        29800  0 +     38948 C
e Semnopithecus_vetulus.k141_1143185                        16479  0 +     30600 C
e Semnopithecus_schistaceus.k141_387461                     33457  0 +     42640 C
e Semnopithecus_priam.k141_410937                           40312  0 +     46263 C
e Semnopithecus_johnii.k141_785014                         121532  0 +    130994 C
e Semnopithecus_hypoleucos.k141_761524                      11528  0 +     20762 C
e Semnopithecus_entellus.k141_1572367                        6153  0 +     15331 C
e Rhinopithecus_strykeri.ctg4                            44859307  0 -  45163003 C
e Rhinopithecus_bieti.k119_554384                            2917  0 -     17045 C
e Pygathrix_nigripes_a.k141_101123                             8537  0 +     18040 C
e Pygathrix_nigripes_b.ctg79                                 6809148  0 +   6970761 C
e Pygathrix_cinerea.k141_374971                             32651  0 +     56732 C
e Propithecus_coquerelli.NW_012147863.1                     21633  0 -     30946 C
e Presbytis_mitrata.k141_860013                              8661  0 +     14865 C
e Presbytis_comata.k141_672698                               8546  0 -     15069 C
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000036.1               26743271  0 +  26888534 C
e Piliocolobus_kirkii.k141_929665                            4788  0 +      7694 C
e Piliocolobus_gordonorum.k141_1270531                       5421  0 -     17985 C
e Piliocolobus_badius.k141_1987485                           4802  0 -      5908 C
e Octodon_degus.JH651621.1                                3687420 1881 +  10294119 I
e Nasalis_larvatus.k141_153429                              11264  0 +     48152 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     91920 1922 -    117718 I
e Hystrix_cristata.HysCri_scaffold_50788                     7688 1865 +     22540 I
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 32592 1717 -     67205 I
e Ctenodactylus_gundi.CteGun_scaffold_447                  214275  0 -    956709 C
e Colobus_polykomos.k141_1406057                            19335  0 +     23629 C
e Colobus_guereza.LG08                                  147667351  0 + 156195979 C
e Colobus_angolensis.KN985967.1                          10889423  0 +  10971483 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               17536 13 +    209709 AA-T-C---TTT-GTTG-T-T
s Acinonyx_jubatus.LLWD01000356.1                         2039500 13 +   3721120 GA-TCT---T-T-GTTG-T-T
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    117759 13 -    189883 GA-T-G---GTC-CTTG-T-T
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10663457 13 +  23371972 GA-TCT---T-T-GTTG-T-T
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7099991 13 -  16596857 GA-CCT---T-T-GTTG-T-T
i Ailurus_fulgens.LNAC01000003.1                        I 6 C 0
s Allenopithecus_nigroviridis.k141_2469532                   5409 13 -     60446 GA-T-C---TTT-CTTG-T-T
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         6126 13 -     29318 GA-T-C---TTT-CTTG-T-T
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         5064 13 +     38766 GA-T-C---TTT-CTTG-T-T
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          6020 13 -     80423 GA-T-C---TTT-CTTG-T-T
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                               992 13 +     19852 GA-T-C---TTT-GTTG-T-T
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                3248 13 -     12443 GA-T-C---TTT-GTTG-T-T
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                              547 13 +      5070 GA-T-C---TTT-GTTG-T-T
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                  292 13 -      1641 GA-T-C---TTT-GTTG-T-T
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          3031 13 -     24210 GA-T-C---TTT-GTTG-T-T
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           29613 13 -     30219 GA-T-C---TTT-GTTG-T-T
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_405616                              5449 13 +     16794 GA-T-A---TTT-GTTG-T-T
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                             581 13 -      1470 GA-T-C---TTT-GTTG-T-T
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             4726 13 -      9835 GA-T-C---TTT-GTTG-T-T
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3525507 13 +   4113121 GATC-T---T-T-GTTG-T-T
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      392543 13 -    631301 GATC-T---T-T-GCTG-T-T
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             2938 13 +     55446 GATC-T---T-T-GTTG-T-T
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 66343  9 +     78111 ---------TTC-GTTG-T-T
i Aotus_azarae.k141_3170768                             I 4 C 0
s Aotus_griseimembra.k141_3275623                            9289  9 +     22701 ---------TTC-GTTG-T-T
i Aotus_griseimembra.k141_3275623                       I 4 C 0
s Aotus_nancymaae.KZ196176.1                              5753247  9 +   9889416 ---------TTC-GTTG-T-T
i Aotus_nancymaae.KZ196176.1                            I 4 C 0
s Aotus_trivirgatus.k141_1740727                             9845  9 -    104377 ---------TTC-GTTG-T-T
i Aotus_trivirgatus.k141_1740727                        I 4 C 0
s Aotus_vociferans.k141_718647                               9852  9 +     23246 ---------TTC-GTTG-T-T
i Aotus_vociferans.k141_718647                          I 4 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     2379 13 +     11424 GA-T-C---TCC-ATAG-C-T
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        6460  9 +      9265 ---------TTC-GTTG-T-T
i Arctocebus_calabarensis.k141_587554                   I 1 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                10968 13 -     29036 GATC-T---T-T-GCTG-T-T
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9543135 13 +  39197703 GA-T-C---TTT-GTTG-T-T
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             64408 13 +     85812 GA-T-C---TTT-GTTG-T-T
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                15421 13 +     89302 GA-T-C---TTT-GTTG-T-T
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             19922 13 -     58268 GA-T-C---TTT-GTTG-T-T
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             67916 13 +    119057 GA-T-C---TTT-GTTG-T-T
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               9885 13 -     25888 GA-T-C---TTT-GTTG-T-T
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                10940 13 -     16375 GA-T-C---TTT-GTTG-C-A
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               4556 13 +      6337 GA-T-C---TTT-GTTG-C-A
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26383991 13 +  51448160 GATC-T---T-T-GTTG-T-T
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        9164 13 -     13118 GATC-T---T-T-GTTG-T-T
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   47969 13 -     72089 GATC-T---T-T-GTTG-C-T
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   302113 13 -   6870073 GATC-T---T-T-GTTG-T-T
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22956211 13 + 161108492 GATC-T---T-T-GTTG-T-T
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     418476 13 +    998990 GATC-T---T-T-GTTG-T-T
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22664865 13 + 158972876 GATC-T---T-T-GTTG-T-T
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               674629 13 +   1914593 GATC-T---T-T-GTTG-T-T
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               117788 13 -    171031 AA-T-C---TTC-ATTG-T-T
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 16808 13 +    125063 AA-T-C---TTC-ATTG-T-T
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                18855 13 -    216513 AA-T-C---TTC-ATTG-T-T
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       11398 13 -    134917 AA-T-C---TTC-ATTG-T-T
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3223133 13 -   8989139 gatt-t---t-t-attg-t-t
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           400834 13 -  15254737 gatt-t---t-t-attg-t-t
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2976571 13 +   6889770 gatt-t---t-t-attg-t-t
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11526333 14 +  39901454 AAATCT---T-T-GTTG-T-T
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   21307 14 +     87036 AAATCT---T-T-GTTG-T-T
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11273016 14 -  35597290 AAATCT---T-T-GTTG-T-T
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11095727 14 +  39895921 AAATCT---T-T-GTTG-T-T
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16462512 14 -  44759192 AAATCT---T-T-GTTG-T-T
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21330587 13 + 157394656 gatc-t---t-t-gttg-t-t
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135711804 13 - 157403528 GATC-T---T-T-GTTG-T-T
i Capra_hircus.CM004562.1                               C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               61748 13 +     67245 GATC-T---T-T-GCTG-T-T
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 I 213
s Castor_canadensis.CasCan_scaffold_417865                    175 13 -       402 TA-T-C---TTA-CCTG-T-T
i Castor_canadensis.CasCan_scaffold_417865              C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   162647 13 -    276539 GATC-T---T-T-GTTG-T-T
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15789663 13 -  24422027 GA-T-T---TTC-ATAG-C-T
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15801602 13 -  24440124 GA-T-T---TTC-ATAG-C-T
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       179774 13 +    436027 GA-T-T---TTC-ATAG-C-T
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18895516  9 -  29618158 ---------TTC-ATTG-T-T
i Cebus_albifrons.Contig22                              I 3 C 0
s Cebus_olivaceus.k141_93739                                12165  9 -     26817 ---------TTC-ATTG-T-T
i Cebus_olivaceus.k141_93739                            I 3 C 0
s Cebus_unicolor.k141_239009                                16409  9 +     25043 ---------TTC-ATTG-T-T
i Cebus_unicolor.k141_239009                            I 3 C 0
s Ceratotherium_simum.JH767818.1                          4367566 13 +   7569818 GA-A-C--TT-T-GTTG-T-T
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         7323 13 -      9338 GA-A-C--TT-T-GTTG-T-T
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6559350 13 +   6739814 GA-T-C---TTT-CTTG-T-T
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      30827 13 +     60454 GA-T-C---TTT-CTTG-T-T
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          6031 13 -     21101 GA-T-C---TTT-CTTG-T-T
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         63341 13 -    107033 GA-T-C---TTT-CTTG-T-T
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        6204 13 -     17608 GA-T-C---TTT-CTTG-T-T
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          3369 13 +     45019 GA-T-C---TTT-CTTG-T-T
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           3429 13 +     15177 GA-T-C---TTT-CTTG-T-T
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          6251 13 +     16677 GA-T-C---TTT-CTTG-T-T
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           28441 13 +     35983 GA-T-C---TTT-CTTG-T-T
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11994972 13 +  12117833 GA-T-C---TTT-CTTG-T-T
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46481733 13 +  46592721 GA-T-C---TTT-CTTG-T-T
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2078027                      45282 13 -     45581 GA-T-C---TTT-CTTG-T-T
i Cercopithecus_neglectus.k141_2078027                  C 0 N 0
s Cercopithecus_nictitans.k141_1129315                       6265 13 +     35577 GA-T-C---TTT-CTTG-T-T
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        6059 13 -     25661 GA-T-C---TTT-CTTG-T-T
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        6016 13 -     17744 GA-T-C---TTT-TTTG-T-T
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        25600 13 +     37128 GA-T-C---TTT-CTTG-T-T
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           4569 15 -      6963 GA-T-C---TTT-GTATTTTT
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           63165 13 -     68416 GA-T-T---TTT-GTTG-T-A
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                           12271 13 +     13308 GA-T-T---TTT-GTTG-T-A
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             9446 13 -     18223 GA-T-C---TTC-ATTG-C-T
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              1185 13 +    188999 GA-T-C---TTC-ATTG-T-T
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           45483 13 +     57117 GA-T-C---TTC-ATTG-T-T
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          50163 13 +     54541 GA-T-C---TTC-ATTG-T-T
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15964351  9 +  43084221 ---------TTC-ATGg-c-t
i Chinchilla_lanigera.JH721867.1                        I 3 C 0
s Chiropotes_israelita.k141_1189915                         74967 13 +    196370 AA-T-C---TTC-ATTG-T-T
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          19148 13 +     40510 AA-T-C---TTC-ATTG-T-T
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15143785 13 -  15256731 GA-T-C---TTT-CTTG-T-T
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      38249 13 -     53260 GA-T-C---TTT-CTTG-T-T
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101148808 13 + 101219884 GA-T-C---TTT-CTTG-T-T
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                18676 13 -     21363 GA-T-C---ATT-GTAT-T-T
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           763980 13 +    964067 Ga-t-c---att-gtat-t-t
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_629495              2251 13 -      3120 TA-A-T---TCT-ATTT-C-T
i Chrysochloris_asiatica.ChrAsi_scaffold_629495         C 0 I 1
s Condylura_cristata.JH655880.1                          60622183 13 +  78930452 AG-A-T---CTT-AGTG-T-T
i Condylura_cristata.JH655880.1                         I 3 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         2161  9 -      5782 -----T---T-T-GTTG-T-T
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 282635 13 -    399297 GA-T-G---ATC-CCTG-T-T
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53035003 16 +  72327488 GT-T-AAAATCC-CTTG-T-T
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              1595 13 -     22648 GG-T-T---ATT-ATTG-T-T
i Crocidura_indochinensis.CroInd_scaffold_27484         I 3 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            57486 13 -     70449 GA-TCT---T-T-GCTG-T-T
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                20835 13 +     26546 GA-T-A---TTC-ATGG-C-T
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             61975 13 -    236241 GA-T-C---TTC-ATGG-C-T
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          185650 11 -   6883506 Gg-t-c---ttt-gtct----
i Dasypus_novemcinctus.JH568778.1                       C 0 I 1
s Daubentonia_madagascariensis.ctg11                     16849100 13 +  31942871 GA-T-C---TTT-CTTG-T-T
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80040614 13 -  96802777 GATC-T---T-T-GTTG-T-T
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18701177 13 -  18957592 GATC-T---T-T-GCTG-T-T
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 326213 13 +    993696 GA-T-C--TT-T-GTTG-T-T
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   6854 13 +    151128 GA-A-C--TT-T-GTTG-T-T
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   159613  9 +    228994 ---------TTC-ATGG-C-T
i Dinomys_branickii.DinBra_scaffold_1996                I 3 C 0
s Dipodomys_ordii.KN672545.1                              3660167 13 +   4240102 GA-T-C---TTC-CTTA-T-T
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  2515 13 -     11986 GA-T-C---TTC-CTTA-T-T
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                39942 13 -     73477 GA-T-C---TTC-ATAG-C-T
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1496185 13 +   1727528 GATC-T---T-T-GTTG-T-T
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7832978 13 +  15467074 ca-a-c---tCT-ATAT-C-C
i Elephantulus_edwardii.JH947210.1                      I 1663 I 1
s Ellobius_lutescens.LOEQ01003611.1                        243800 12 -    369425 GA-T-G---GT--CTTG-T-T
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Enhydra_lutris.KZ291749.1                              85877455 11 +  99434291 ---tat---t-t-gttg-T-T
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4708934 13 +   6522550 GAAC-T---T-T-GCTG-T-T
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5856579 12 -   7175178 GA-T-C--TT-T-GTTG-T--
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13355079 12 +  41866177 GA-T-C--TT-T-GTTG-T--
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          16569 12 +     92910 GA-T-C--TT-T-GTTG-T--
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11541317 11 +  16010500 AA-C-T---TCT-GTta----
i Erinaceus_europaeus.JH835290.1                        I 3 I 4
s Erythrocebus_patas.Contig8                             48780818 13 -  48907691 GA-T-C---TTT-CTTG-T-T
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          318834 13 +    330699 GATC-T---T-T-GTTG-T-T
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             65291 13 +     89355 GATC-T---T-T-GTTG-T-T
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              9252 13 +     13586 GA-T-C---TTT-GCTG-T-A
i Eulemur_albifrons.k141_715837                         C 0 I 2
s Eulemur_collaris.k141_1015201                              2515 13 -      4292 GA-T-C---TTT-GCTG-T-A
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            15648 13 +     36558 GA-T-C---TTT-GCTG-T-A
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            11973 13 +     60246 GA-T-C---TTT-GCTG-T-A
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                15456 13 +    109717 GA-T-C---TTT-GCTG-T-A
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 3441 13 -     19505 GA-T-C---TTT-GCTG-T-A
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                20113 13 +     27497 GA-T-C---TTT-GCTG-T-A
i Eulemur_mongoz.k141_825972                            C 0 I 1
s Eulemur_rubriventer.k141_411740                           22569 13 +     26808 GA-T-C---TTT-GCTG-T-A
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                37304 13 +     46535 GA-T-C---TTT-GCTG-T-A
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              20043 13 -     29447 GA-T-C---TTT-GCTG-T-A
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.AANG03133801.1                                  539 13 -       736 GA-TCT---T-T-GTTG-T-T
i Felis_catus.AANG03133801.1                            C 0 C 0
s Felis_catus_fca126.CM031420.1                         129285895 13 - 158578461 GA-TCT---T-T-GTTG-T-T
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 26994 13 +     52776 GA-TAT---T-T-GTTG-T-T
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13896121 13 -  19261668 GA-T-C---TTC-ATGG-T-T
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     215307  9 -    847004 ---------TTT-GTTA-T-T
i Galago_moholi.ctg555                                  I 3 C 0
s Galago_senegalensis.k141_964197                           17668  9 -     43889 ---------TTT-GTTA-T-T
i Galago_senegalensis.k141_964197                       I 3 C 0
s Galagoides_demidoff.k141_1769638                          14813  9 +     27357 ---------TTC-GTTA-T-T
i Galagoides_demidoff.k141_1769638                      I 3 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               159551 13 +    324696 GA-T-C---TTA-GTTG-T-T
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    185983 13 -    189561 GATC-T---T-T-GTTG-T-T
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           16446 13 -     18683 CA-T-C---GTT-GTGG-T-T
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               9234 13 -     14630 GA-T-C---TTT-GTTG-T-T
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119656334 13 - 195582420 GA-T-C---TTT-GTTG-T-T
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   79763 13 +    118900 GA-C-C---TTT-GTGG-T-T
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         6035 13 +     10286 GA-T-C---TTT-GTTG-T-A
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             4513 13 -     11661 GA-T-C---TTT-GTTG-T-A
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             9840 13 +     56096 GA-T-C---TTT-GTTG-T-A
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        33089 13 -     42470 GA-T-C---TTT-GTTG-T-A
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        49712 13 -     54384 GA-T-C---TTT-GTTG-T-A
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              22627 13 +     53719 GA-TCT---T-C-GCTA-C-T
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                32854 13 -     91191 GATC-T---T-T-GTTG-T-T
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2560612 13 +  31725842 GA-T-C---TTC-ATgg-t-t
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               62853 13 +     73687 GT-T-C---TTT-ATTG-T-A
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              150617 13 +    277961 GATC-T---T-T-GTGG-T-T
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      283015 13 -    477199 gatt-t---t-t-gttt-t-t
i Hipposideros_armiger.JXIK01001085.1                   I 32 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959                785 13 +     26078 GATT-T---T-T-GTTG-T-T
i Hipposideros_galeritus.HipGal_scaffold_52959          I 32 I 7
s Hoolock_leuconedys.ctg315                                   350239 13 +    431944 GA-T-C---TTT-GTTG-T-T
i Hoolock_leuconedys.ctg315                                C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 23096 13 -     67322 GA-TCT---T-T-GTTG-T-T
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           21227 13 -    119109 GA-T-C---TTC-ATAG-C-T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_1816750                             1720 13 +      3202 GA-T-C---TTT-GTTG-T-T
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1633646                              1690 13 -      2102 GA-T-C---TTT-GTTG-T-T
i Hylobates_agilis.k141_1633646                         C 0 C 0
s Hylobates_klossii.k141_468230                              3207 13 +      5464 GA-T-C---TTT-GTTG-T-T
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14628555 13 -  25970782 GA-T-C---TTT-GTTG-T-T
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            1106 13 +      4161 GA-T-C---TTT-GTTG-T-T
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             37416 13 -     60944 GA-T-C---TTT-GTTG-T-T
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7130357 13 +  13083262 GA-T-A---GTC-ATgg-c-t
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   1512 13 +      3484 GA-T-C---TTT-GTTG-T-A
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              12826 13 +     17520 GATC-T---T-T-GTTG-T-T
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               27450  8 +     37189 ---------T-T-GTTG-C-T
i Kogia_breviceps.KogBre_flattened_line_35920           I 3 C 0
s Lagothrix_lagothricha.k141_12968                          54003 13 -    147782 GA-T-C---TTT-GTTG-T-T
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    5546 13 +     26176 GATC-T---T-T-GCTG-T-T
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258411387 13 - 285822530 GA-T-C---TTT-GTTG-T-A
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        28700 15 +     39228 GA-T-C-CCTTT-ATTG-T-A
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            58064 15 +     63517 GA-T-C-CCTTT-ATTG-T-A
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        36444 15 -     38897 GA-T-C-CCTTT-GTTG-T-A
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      2490 15 -     13103 GA-T-C-CCTTT-ATTG-T-A
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3091430 13 -   3498232 GA-TCT---T-T-GTTG-t-t
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    20853 13 +     22452 GT-T-C---TTT-GTTG-T-T
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            139760 13 +   3060487 GATC-T---T-T-GTTG-T-T
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19252439 13 +  19376315 GA-T-C---TTT-CTTG-T-T
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           15258  9 +     84689 ---------TTT-GTTG-T-T
i Loris_lydekkerianus.k141_550999                       I 4 C 0
s Loris_tardigradus.ctg97                                 3782997  9 +   6799190 ---------TTT-GTTG-T-T
i Loris_tardigradus.ctg97                               I 4 C 0
s Loxodonta_africana.GL010040.1                          20598780 13 -  62548349 GA-T-C---TTT-ATTG-T-C
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11095183 14 +  39895028 AAATCT---T-T-GTTG-T-T
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             24190 13 +     74745 GA-T-C---TTT-CTTG-T-T
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12710651 13 +  12821369 GA-T-C---TTT-CTTG-T-T
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                3224 13 -     26467 GA-T-C---TTT-CTTG-T-T
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           51095 13 +     63263 GA-T-C---TTT-CTTG-T-T
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 3205 13 -     26361 GA-T-C---TTT-CTTG-T-T
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 6395 13 -      7381 GA-T-C---TTT-CTTG-T-T
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  49624 13 -     79256 GA-T-C---TTT-CTTG-T-T
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196039722 13 + 196197964 GA-T-C---TTT-CTTG-T-T
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11449892 13 +  11645122 GA-T-C---TTT-CTTG-T-T
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   8578 13 -     46448 GA-T-C---TTT-CTTG-T-T
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                6241 13 -     13212 GA-T-C---TTT-CTTG-T-T
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 19921 13 -     55006 GA-T-C---TTT-CTTG-T-T
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43845036 13 +  43892939 GA-T-C---TTT-CTTG-T-T
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               21205 13 -     24607 GA-T-C---TTT-CTTG-T-T
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               8575 13 -     27140 GA-T-C---TTT-CTTG-T-T
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43441611 13 -  43563597 GA-T-C---TTT-CTTG-T-T
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4454415 13 -   4543643 GA-T-C---TTT-CTTG-T-T
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            152195  7 +    252755 -----------C-TTTG-T-T
i Manis_javanica.JSZB01003966.1                         I 3 C 0
s Manis_pentadactyla.KN017078.1                             39785  7 +     58827 -----------C-TTTG-T-T
i Manis_pentadactyla.KN017078.1                         I 3 C 0
s Marmota_marmota.CZRN01000005.1                         36878229 13 +  64221397 GA-C-A---GTC-AGgg-c-t
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       65581 13 -    234502 GATT-T---T-T-ATTG-T-T
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             6345 13 -     87323 GA-TCT---T-T-GTTG-T-T
i Mellivora_capensis.MelCap_flattened_line_15433        I 6 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 1252 13 +    115071 GA-T-G---GTC-CTTG-T-T
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1051522 16 -  26018355 GT-T-AAAACCC-CTTG-T-T
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    2417 13 -     12939 GATC-T---T-T-GTTG-T-T
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16514452  6 +  47401472 -------------GTTG-T-A
i Microcebus_murinus.CM007691.1                         I 4 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  41475 13 -     48017 TG-A-T---TCT-ATTT-C-T
i Microgale_talazaci.MicTal_scaffold_34660              C 0 I 1
s Micronycteris_hirsuta.MicHir_scaffold_37978               24924 13 -     32043 AATT-T---T-T-GCTG-T-T
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22824604 12 -  98408828 GA-T-G---GT--CTTG-T-T
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8212982 13 +  10048721 GATC-T---T-T-GCTG-C-T
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            37471 13 +     45743 GATC-T---T-T-GCTG-C-T
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         6157 13 +     29742 GA-T-C---TTT-CTTG-T-T
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        16926 13 -    104932 GA-TCT---T-T-GTTG-T-T
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     5134  6 -     12809 -------------GTTG-T-A
i Mirza_zaza.k141_593947                                I 4 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 150207 13 +    154973 GATC-T---T-T-GTTG-T-T
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                163462 13 +    265003 GATC-T---T-T-GCTG-T-T
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  6203 13 -     19904 GATC-T---T-T-GTTG-T-T
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  150302 13 -    168139 GA-TTT---T-T-GCTG-T-T
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          24396 13 -    100666 GATC-T---C-T-GCTG-T-T
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70771822 13 +  92629107 GG-C-A---GTT-CCtg-t-t
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75493876 13 +  98207768 GG-C-A---ATC-CCTG-T-T
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67560628 13 +  89017189 GG-C-A---GTC-CCta-t-t
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74336602 13 +  97876770 GG-C-A---ATC-CCTG-T-T
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             14848 13 +     98495 GA-T-T---TCT-GTGG-T-T
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4428184 13 -  28371801 GA-TCT---T-T-GCTG-T-T
i Mustela_putorius.JH417978.1                           I 6 C 0
s Myotis_brandtii.KE161952.1                               971268 13 +   8389877 GATC-T---T-T-GCTG-T-T
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5022689 13 +   6462685 GATC-T---T-T-GCTG-T-T
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3468772 13 -   3747815 GATC-T---T-T-GCTG-T-T
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        14013 13 +     66751 GATC-T---T-T-GCTG-T-T
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             7626 12 -      8794 GA-G-C---TTT-GTAT-T--
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            120354 13 +    362372 AA-T-A---ATC-TTTG-T-T
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4490324 13 -  14209539 ga-ttt---t-t-gttg-t-t
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3954798 13 -   4490290 GATC-T---T-T-GTTG-T-T
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  50521 13 +     94413 GGTC-T---T-T-GCTG-T-T
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_762468                             225 13 -      2755 GA-T-C---TTT-GTTG-T-T
i Nomascus_annamensis.k141_762468                       I 155 C 0
s Nomascus_concolor.k141_27752                                887 13 +      1113 GA-T-C---TTT-GTTG-T-T
i Nomascus_concolor.k141_27752                          I 312 n 13
s Nomascus_gabriellae.k141_1400361                            776 13 -      2203 GA-T-C---TTT-GTTG-T-T
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_1022                             800 13 -     11638 GA-T-C---TTT-GTTG-T-T
i Nomascus_siki_b.tarseq_1022                       C 0 C 0
s Nomascus_siki_a.k141_421408                                   690 13 +     16235 GA-T-C---TTT-GTTG-T-T
i Nomascus_siki_a.k141_421408                             I 30 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                38048 14 +   3668941 AAATCT---T-T-GTTG-T-T
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65571821  9 -  95554990 ---------TTT-GTTG-t-t
i Nycticebus_bengalensis.LG16                           I 4 C 0
s Nycticebus_coucang.k141_771591                            15230  9 +     16181 ---------ttt-gttg-t-t
i Nycticebus_coucang.k141_771591                        I 4 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65680017  9 +  89412551 ---------ttt-gttg-t-t
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     I 4 C 0
s Odobenus_rosmarus.KB229369.1                             685027 13 -   3126709 AA-TCT---T-T-GTTG-T-T
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1083635 13 +   1425656 GATC-T---T-T-GTTG-T-T
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         41718 13 +     78940 GATC-T---T-T-GTTG-T-T
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  130400 12 +    145789 GA-T-G---GC--CTTG-T-T
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  43093 13 +     62360 GA-T-G---GTC-CTTG-T-T
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7228473 13 -   7562323 GATC-T---T-T-GTTG-T-T
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              64248 13 -     66828 GA-A-C---TCT-ATTG-C-T
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141883868 13 + 163896628 GT-T-C---TTT-GTTG-T-T
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      315186 14 -    505867 AAATCT---T-T-GTTG-T-T
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        5169  9 -     53940 ---------TTT-GTTA-T-T
i Otolemur_crassicaudatus.k141_505435                   I 3 C 0
s Otolemur_garnettii.GL873528.1                          18013142  9 -  38779656 ---------TTT-GTTA-T-T
i Otolemur_garnettii.GL873528.1                         I 3 C 0
s Ovis_aries.CM001582.2                                 134082640 13 - 275406953 GATC-T---T-T-GTTG-T-T
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      83875 12 +    140051 GATC-T---T-T--TTG-T-T
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127578513 13 - 205426864 GA-T-C---TTT-GTTG-T-T
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120155673 13 - 196562556 GA-T-C---TTT-GTTG-T-T
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  39914 13 +    295523 GA-TCT---T-T-GTTG-T-T
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3643729 13 +  18214204 GA-TCT---T-T-GTTG-T-T
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5033377 13 -   6340057 GA-TCT---T-T-GTTG-T-T
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1071516 13 -   1292953 GATC-T---T-T-GCTG-T-T
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188160400 13 - 188283584 GA-T-C---TTT-CTTG-T-T
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              3490 13 +     25005 GA-T-C---TTT-CTTG-T-T
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47517772 13 +  47705337 GA-T-C---TTT-CTTG-T-T
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 71763 13 -    104429 GA-T-C---TTT-CTTG-T-T
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   10295 13 +     14967 GA-T-C---TTT-CTTG-T-T
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 6160 13 -      7628 GA-T-C---TTT-CTTG-T-T
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    121404 13 -    135482 GA-TCT---T-T-GTTG-T-T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          10834  9 -     23713 ---------TTC-GTCG-T-T
i Perodicticus_ibeanus.k141_117958                      I 1 C 0
s Perodicticus_potto.k141_1136815                           11974  9 +     61070 ---------TTC-GTCA-T-T
i Perodicticus_potto.k141_1136815                       I 1 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       2251 10 +     49596 GG-T-C---T----TTA-T-T
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4955457 13 -   8017169 GA-T-G---TTC-CTTG-T-T
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    17310 13 -     36578 GG-T-C---TTC-ATGG-T-T
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              2939 13 +      8220 GATC-T---T-T-GTTG-T-T
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            99559 13 +    112873 GATC-T---T-T-GCTA-T-T
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           9410 13 +     21690 TATC-T---T-T-GTTG-T-T
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       26095 13 +     44506 GA-T-C---TTC-ATTG-T-T
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        26308 13 +     67491 GA-T-C---TTC-ATTG-T-T
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      16547 13 -     98129 GA-T-C---TTC-ATTG-T-T
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     26148 13 +    147771 GA-T-C---TTC-ATTG-T-T
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         2783 13 -     43940 GA-T-C---TTC-ATTG-T-T
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          6866 13 -     55515 GA-T-C---TTC-ATTG-T-T
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         26220 13 +    152463 GA-T-C---TTC-ATTG-T-T
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       4028 13 -    119457 GA-T-C---TTC-ATTG-T-T
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         15943 13 +    134592 GA-T-C---TTC-ATTG-T-T
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          26530 13 -     75465 GA-T-C---TTC-ATTG-T-T
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              191143 13 -    373494 GA-T-C---TTT-GTTG-T-T
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19811790 13 +  19899266 GA-T-C---TTT-GTTG-T-T
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                3958 13 -      9567 GT-T-C---TTT-ATTG-T-A
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6852761 13 +  12164890 GA-T-C---TTT-GTTG-T-A
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coronatus.k141_1353159                         7847 13 +     11805 GA-T-C---TTT-GTTG-T-A
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           47182 13 +     52369 GA-T-C---TTT-GTTG-T-A
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         39569 13 -     44753 GA-T-C---TTT-GTTG-T-A
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            21492 13 +     27322 GA-T-C---TTT-GTTG-T-A
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       21140 13 -     53241 GA-T-C---TTT-GTTG-T-A
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         43403 13 -     48185 GA-T-C---TTT-GTTG-T-A
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           38247 13 +     77221 GA-T-G---GTC-CTTG-T-T
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            6106 13 -     27784 GATC-T---T-T-GTTG-T-T
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        250313 13 -    344369 GA-TCT---T-T-GTTG-T-T
i Pteronura_brasiliensis.PteBra_flattened_line_1343     I 6 C 0
s Puma_concolor.QAVW01000427.1                          131540025 13 - 161321710 GA-TCT---T-T-GTTG-T-T
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                20499 13 +     68503 GATC-T---C-T-GTTG-T-T
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13917658 13 +  90463843 GG-C-G---GTC-CCtg-t-t
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1792617 13 +   2252614 gatt-t---t-t-gttg-t-t
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                       909 13 -      4338 GATC-T---T-T-GTTG-T-T
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15676551 13 -  43202129 GA-T-C---TTC-ATTG-T-T
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        8464 13 +     34089 GA-T-C---TTC-ATTG-T-T
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              8404 13 -     60842 GA-T-C---TTC-ATTG-T-T
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              8498 13 +     67014 GA-T-C---TTC-ATTG-T-T
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              8475 13 +     60816 GA-T-C---TTC-ATTG-T-T
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 8412 13 -     76454 GA-T-C---TTC-ATTG-T-T
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17345199 13 -  30362882 GA-T-C---TTC-ATTG-T-T
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         24520 13 -     62485 GA-T-C---TTC-ATTG-T-T
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   39636 13 -    114521 AG-A-T---CTT-AGTG-T-T
i Scalopus_aquaticus.ScaAqu_scaffold_9300               I 3 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  105027 13 -    120886 AA-T-C---ATC-CTTG-T-T
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            23561 13 +    739146 GA-T-C---TTT-ATTT-T-T
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17770016 14 -  27805282 GG-T-T---GTTTTTTG-T-t
i Sorex_araneus.JH798170.1                              I 4 C 0
s Spermophilus_dauricus.KZ294190.1                        2244061 13 +   2842873 GA-T-A---GTC-ATgg-c-t
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             238827 13 -    276980 TA-TCT---T-T-GTTG-T-T
i Spilogale_gracilis.SpiGra_flattened_line_905          I 5 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            33219 13 +     62062 GA-TCT---T-T-GCTG-T-T
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189275001 13 + 218635234 GATC-T---T-T-GTTG-T-T
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        18813 13 -  13920577 GA-T-C---TTT-GTTG-T-T
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                2333 13 +     20549 GATC-A---T-A-GCTG-T-T
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               17299 12 +     45698 GA-G-C---TTT-TTAT-T--
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      810797 13 +   1148477 GA-T-C--TT-T-GTTG-T-T
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  61439 13 +     99546 GA-T-C--TT-T-GTTG-T-T
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194011933 13 - 194193292 GA-T-C---TTT-CTTG-T-T
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_1221625                  410 14 -       654 GA-T-C---TTT-GTAT-TTT
i Tolypeutes_matacus.TolMat_scaffold_1221625            n 14 n 14
s Tonatia_saurophila.TonSau_scaffold_3334                  138100 13 -    259118 GATC-T---T-T-GCTG-T-T
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trichechus_manatus.JH594618.1                          16089856 13 +  31416278 GA-T-C---TTT-ATTG-T-T
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2797767 13 -   3938065 GA-T-C---TTT-GTTG-T-T
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    9702 13 +     13056 GA-T-C---TTT-GTGG-T-T
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69317202 13 -  96451834 GATC-T---T-T-GTTG-T-T
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                     103 13 +    136657 AG-T-T---CTT-AGTG-T-T
i Uropsilus_gracilis.UroGra_scaffold_4115               I 3 C 0
s Ursus_maritimus.KK498671.1                              6520730 13 +  28682327 GA-TCT---T-T-GTTG-T-T
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  9404 13 -     20643 GA-T-C---TTT-GTTG-T-A
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             28939 13 -     33872 GA-T-C---TTT-GTTG-T-A
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1528241 13 -   2331223 gatt-t---t-t-attg-t-t
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                144413 14 -    281493 AAATCT---T-T-GTTG-T-T
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       131556 13 -    134049 GA-T-A---TCT-ATAG-C-T
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        219883 13 -    227762 AA-TCT---T-T-GTTG-T-T
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            1949 13 -     13665 GATC-T---T-T-GTTG-T-T
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Ochotona_princeps.JH802095.1                            4999348 675 -  23139505 I
e Tragulus_javanicus.TraJav_scaffold_14717                   9488 743 +     90398 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Echinops_telfairi.JH980316.1                           22999931  2 -  44670279 I
e Zapus_hudsonius.ZapHud_scaffold_256618                      408  0 -      2259 C
e Jaculus_jaculus.JH725517.1                              8577673  0 +  11848649 C
e Allactaga_bullata.AllBul_scaffold_141108                    666  0 -      7259 C
e Trachypithecus_pileatus.k141_1022309                       5226  0 +     13828 C
e Trachypithecus_phayrei.ctg3                            44662914  0 -  44834318 C
e Trachypithecus_obscurus.k141_1115109                       8130  0 -     28054 C
e Trachypithecus_melamera.k141_699241                        2986  0 -     24393 C
e Trachypithecus_leucocephalus.k141_381681                   3005  0 +     12481 C
e Trachypithecus_laotum.k141_760702                          4719  0 +     14371 C
e Trachypithecus_hatinhensis.k141_504423                     6067  0 -     15592 C
e Trachypithecus_germaini.k141_868450                        3883  0 -     11566 C
e Trachypithecus_geei.k141_670367                           46082  0 -     54611 C
e Trachypithecus_francoisi.k141_768164                       4689  0 -     14244 C
e Trachypithecus_cristatus.k141_1011511                      5261  0 -     12939 C
e Trachypithecus_crepusculus.k141_1588528                   23360  0 -     32910 C
e Trachypithecus_auratus.k141_738098                        29800  0 +     38948 C
e Tarsius_wallacei.k141_48636                               64696  0 +     65473 C
e Tarsius_lariang.k141_609102                               31387  0 +     42269 C
e Semnopithecus_vetulus.k141_1143185                        16479  0 +     30600 C
e Semnopithecus_schistaceus.k141_387461                     33457  0 +     42640 C
e Semnopithecus_priam.k141_410937                           40312  0 +     46263 C
e Semnopithecus_johnii.k141_785014                         121532  0 +    130994 C
e Semnopithecus_hypoleucos.k141_761524                      11528  0 +     20762 C
e Semnopithecus_entellus.k141_1572367                        6153  0 +     15331 C
e Rhinopithecus_strykeri.ctg4                            44859307  0 -  45163003 C
e Rhinopithecus_bieti.k119_554384                            2917  0 -     17045 C
e Pygathrix_nigripes_a.k141_101123                             8537  0 +     18040 C
e Pygathrix_nigripes_b.ctg79                                 6809148  0 +   6970761 C
e Pygathrix_cinerea.k141_374971                             32651  0 +     56732 C
e Propithecus_coquerelli.NW_012147863.1                     21633  0 -     30946 C
e Presbytis_mitrata.k141_860013                              8661  0 +     14865 C
e Presbytis_comata.k141_672698                               8546  0 -     15069 C
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000036.1               26743271  0 +  26888534 C
e Piliocolobus_kirkii.k141_929665                            4788  0 +      7694 C
e Piliocolobus_gordonorum.k141_1270531                       5421  0 -     17985 C
e Piliocolobus_badius.k141_1987485                           4802  0 -      5908 C
e Octodon_degus.JH651621.1                                3687420 1881 +  10294119 I
e Nasalis_larvatus.k141_153429                              11264  0 +     48152 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     91920 1922 -    117718 I
e Hystrix_cristata.HysCri_scaffold_50788                     7688 1865 +     22540 I
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 32592 1717 -     67205 I
e Ctenodactylus_gundi.CteGun_scaffold_447                  214275  0 -    956709 C
e Colobus_polykomos.k141_1406057                            19335  0 +     23629 C
e Colobus_guereza.LG08                                  147667351  0 + 156195979 C
e Colobus_angolensis.KN985967.1                          10889423  0 +  10971483 C
e Cephalopachus_bancanus.k141_702587                        12545  0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530  0 +    345090 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               17549 1 +    209709 G
s Acinonyx_jubatus.LLWD01000356.1                         2039513 1 +   3721120 G
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    117772 1 -    189883 A
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10663470 1 +  23371972 G
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7100004 1 -  16596857 A
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   5422 1 -     60446 G
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         6139 1 -     29318 G
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         5077 1 +     38766 G
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          6033 1 -     80423 G
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              1005 1 +     19852 G
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                3261 1 -     12443 G
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                              560 1 +      5070 G
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                  305 1 -      1641 G
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          3044 1 -     24210 G
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           29626 1 -     30219 G
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_405616                              5462 1 +     16794 G
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                             594 1 -      1470 G
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             4739 1 -      9835 G
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3525520 1 +   4113121 G
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      392556 1 -    631301 G
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             2951 1 +     55446 G
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 66352 1 +     78111 G
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            9298 1 +     22701 G
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5753256 1 +   9889416 G
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             9854 1 -    104377 G
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               9861 1 +     23246 G
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     2392 1 +     11424 G
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        6469 1 +      9265 G
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                10981 1 -     29036 G
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9543148 1 +  39197703 G
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             64421 1 +     85812 G
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                15434 1 +     89302 G
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             19935 1 -     58268 G
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             67929 1 +    119057 G
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               9898 1 -     25888 G
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                10953 1 -     16375 G
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               4569 1 +      6337 G
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26384004 1 +  51448160 G
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        9177 1 -     13118 G
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   47982 1 -     72089 G
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   302126 1 -   6870073 G
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22956224 1 + 161108492 G
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     418489 1 +    998990 G
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22664878 1 + 158972876 G
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               674642 1 +   1914593 G
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               117801 1 -    171031 G
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 16821 1 +    125063 G
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                18868 1 -    216513 G
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       11411 1 -    134917 G
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3223146 1 -   8989139 g
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           400847 1 -  15254737 g
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2976584 1 +   6889770 g
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11526347 1 +  39901454 A
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   21321 1 +     87036 A
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11273030 1 -  35597290 A
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11095741 1 +  39895921 A
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16462526 1 -  44759192 A
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21330600 1 + 157394656 g
i Capra_aegagrus.CM003214.1                             C 0 I 2862
s Capra_hircus.CM004562.1                               135711817 1 - 157403528 G
i Capra_hircus.CM004562.1                               C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               61974 1 +     67245 G
i Carollia_perspicillata.CarPer_scaffold_4436           I 213 C 0
s Castor_canadensis.CasCan_scaffold_417865                    188 1 -       402 G
i Castor_canadensis.CasCan_scaffold_417865              C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   162660 1 -    276539 G
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15789676 1 -  24422027 G
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15801615 1 -  24440124 G
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       179787 1 +    436027 G
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18895525 1 -  29618158 G
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                12174 1 -     26817 G
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                16418 1 +     25043 G
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4367579 1 +   7569818 G
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         7336 1 -      9338 G
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6559363 1 +   6739814 G
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      30840 1 +     60454 G
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          6044 1 -     21101 G
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         63354 1 -    107033 G
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        6217 1 -     17608 G
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          3382 1 +     45019 G
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           3442 1 +     15177 G
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          6264 1 +     16677 G
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           28454 1 +     35983 G
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11994985 1 +  12117833 G
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46481746 1 +  46592721 G
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                          0 1 -     27215 G
i Cercopithecus_neglectus.k141_2169300                  N 0 I 78
s Cercopithecus_nictitans.k141_1129315                       6278 1 +     35577 G
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        6072 1 -     25661 G
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        6029 1 -     17744 G
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        25613 1 +     37128 G
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           4584 1 -      6963 A
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           63178 1 -     68416 G
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                           12284 1 +     13308 G
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             9459 1 -     18223 G
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              1198 1 +    188999 G
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           45496 1 +     57117 G
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          50176 1 +     54541 G
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15964360 1 +  43084221 t
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         74980 1 +    196370 G
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          19161 1 +     40510 G
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15143798 1 -  15256731 G
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      38262 1 -     53260 G
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101148821 1 + 101219884 G
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                18689 1 -     21363 T
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           763993 1 +    964067 t
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_629495              2265 1 -      3120 A
i Chrysochloris_asiatica.ChrAsi_scaffold_629495         I 1 C 0
s Condylura_cristata.JH655880.1                          60622196 1 +  78930452 A
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         2170 1 -      5782 A
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 282648 1 -    399297 A
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53035019 1 +  72327488 A
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              1608 1 -     22648 G
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            57499 1 -     70449 G
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                20848 1 +     26546 G
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             61988 1 -    236241 G
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          185662 1 -   6883506 t
i Dasypus_novemcinctus.JH568778.1                       I 1 C 0
s Daubentonia_madagascariensis.ctg11                     16849113 1 +  31942871 G
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80040627 1 -  96802777 G
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18701190 1 -  18957592 G
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 326226 1 +    993696 G
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   6867 1 +    151128 G
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   159622 1 +    228994 T
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3660180 1 +   4240102 G
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  2528 1 -     11986 G
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                39955 1 -     73477 G
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1496198 1 +   1727528 G
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7832992 1 +  15467074 G
i Elephantulus_edwardii.JH947210.1                      I 1 C 0
s Ellobius_lutescens.LOEQ01003611.1                        243812 1 -    369425 A
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Enhydra_lutris.KZ291749.1                              85877466 1 +  99434291 G
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4708947 1 +   6522550 G
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Erythrocebus_patas.Contig8                             48780831 1 -  48907691 G
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          318847 1 +    330699 G
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             65304 1 +     89355 G
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_59549                                360 1 +      1101 G
i Eulemur_albifrons.k141_59549                          I 47 I 33
s Eulemur_collaris.k141_1015201                              2528 1 -      4292 A
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            15661 1 +     36558 G
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            11986 1 +     60246 G
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                15469 1 +    109717 A
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 3454 1 -     19505 G
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                20127 1 +     27497 A
i Eulemur_mongoz.k141_825972                            I 1 C 0
s Eulemur_rubriventer.k141_411740                           22582 1 +     26808 G
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                37317 1 +     46535 G
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              20056 1 -     29447 A
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.AANG03133801.1                                  552 1 -       736 G
i Felis_catus.AANG03133801.1                            C 0 C 0
s Felis_catus_fca126.CM031420.1                         129285908 1 - 158578461 G
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 27007 1 +     52776 G
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13896134 1 -  19261668 G
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     215316 1 -    847004 A
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           17677 1 -     43889 A
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          14822 1 +     27357 G
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               159564 1 +    324696 G
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    185996 1 -    189561 G
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           16459 1 -     18683 G
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               9247 1 -     14630 G
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119656347 1 - 195582420 G
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   79776 1 +    118900 G
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         6048 1 +     10286 G
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             4526 1 -     11661 G
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             9853 1 +     56096 G
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        33102 1 -     42470 G
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        49725 1 -     54384 G
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              22640 1 +     53719 G
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                32867 1 -     91191 G
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2560625 1 +  31725842 g
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               62866 1 +     73687 G
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              150630 1 +    277961 G
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      283028 1 -    477199 g
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_7653                5591 1 +     86108 G
i Hipposideros_galeritus.HipGal_scaffold_7653           I 13 C 0
s Hoolock_leuconedys.ctg315                                   350252 1 +    431944 G
i Hoolock_leuconedys.ctg315                                C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 23109 1 -     67322 G
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           21240 1 -    119109 G
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_1816750                             1733 1 +      3202 G
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1633646                              1703 1 -      2102 G
i Hylobates_agilis.k141_1633646                         C 0 C 0
s Hylobates_klossii.k141_468230                              3220 1 +      5464 G
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14628568 1 -  25970782 G
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            1119 1 +      4161 G
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             37429 1 -     60944 G
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7130370 1 +  13083262 a
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   1525 1 +      3484 G
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              12839 1 +     17520 G
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               27458 1 +     37189 G
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          54016 1 -    147782 G
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    5559 1 +     26176 G
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258411400 1 - 285822530 G
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        28715 1 +     39228 G
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            58079 1 +     63517 G
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        36459 1 -     38897 G
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      2505 1 -     13103 G
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3091443 1 -   3498232 g
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    20866 1 +     22452 G
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            139773 1 +   3060487 G
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19252452 1 +  19376315 G
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           15267 1 +     84689 G
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3783006 1 +   6799190 G
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20598793 1 -  62548349 C
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11095197 1 +  39895028 A
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             24203 1 +     74745 A
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12710664 1 +  12821369 A
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                3237 1 -     26467 G
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           51108 1 +     63263 G
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 3218 1 -     26361 G
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 6408 1 -      7381 G
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  49637 1 -     79256 G
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196039735 1 + 196197964 G
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11449905 1 +  11645122 G
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   8591 1 -     46448 G
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                6254 1 -     13212 A
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 19934 1 -     55006 G
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43845049 1 +  43892939 G
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               21218 1 -     24607 A
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               8588 1 -     27140 G
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43441624 1 -  43563597 G
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4454428 1 -   4543643 G
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            152202 1 +    252755 G
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             39792 1 +     58827 G
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36878242 1 +  64221397 a
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       65594 1 -    234502 G
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             6358 1 -     87323 G
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 1265 1 +    115071 A
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1051538 1 -  26018355 A
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    2430 1 -     12939 G
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16514458 1 +  47401472 G
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  41489 1 -     48017 G
i Microgale_talazaci.MicTal_scaffold_34660              I 1 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               24937 1 -     32043 G
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22824616 1 -  98408828 A
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8212995 1 +  10048721 G
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            37484 1 +     45743 G
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         6170 1 +     29742 G
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        16939 1 -    104932 G
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     5140 1 -     12809 G
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 150220 1 +    154973 G
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                163475 1 +    265003 G
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  6216 1 -     19904 G
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  150315 1 -    168139 G
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          24409 1 -    100666 G
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70771835 1 +  92629107 a
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75493889 1 +  98207768 A
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67560641 1 +  89017189 a
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74336615 1 +  97876770 A
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             14861 1 +     98495 G
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4428197 1 -  28371801 G
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myotis_brandtii.KE161952.1                               971281 1 +   8389877 G
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5022702 1 +   6462685 G
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3468785 1 -   3747815 G
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        14026 1 +     66751 A
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             7638 1 -      8794 T
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            120367 1 +    362372 A
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4490337 1 -  14209539 g
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3954811 1 -   4490290 G
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  50534 1 +     94413 G
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_762468                             238 1 -      2755 G
i Nomascus_annamensis.k141_762468                       C 0 C 0
s Nomascus_concolor.k141_70405                                858 1 +      1153 G
i Nomascus_concolor.k141_70405                          I 13 C 0
s Nomascus_gabriellae.k141_1400361                            789 1 -      2203 G
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_1022                             813 1 -     11638 G
i Nomascus_siki_b.tarseq_1022                       C 0 C 0
s Nomascus_siki_a.k141_421408                                   703 1 +     16235 G
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                38062 1 +   3668941 A
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65571830 1 -  95554990 g
i Nycticebus_bengalensis.LG16                           C 0 I 112
s Nycticebus_coucang.k141_771591                            15239 1 +     16181 g
i Nycticebus_coucang.k141_771591                        C 0 I 113
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65680026 1 +  89412551 g
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 I 104
s Odobenus_rosmarus.KB229369.1                             685040 1 -   3126709 G
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1083648 1 +   1425656 G
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         41731 1 +     78940 G
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  130412 1 +    145789 A
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  43106 1 +     62360 A
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7228486 1 -   7562323 G
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              64261 1 -     66828 G
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141883881 1 + 163896628 G
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      315200 1 -    505867 A
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        5178 1 -     53940 G
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18013151 1 -  38779656 G
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134082653 1 - 275406953 G
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      83887 1 +    140051 G
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127578526 1 - 205426864 G
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120155686 1 - 196562556 G
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  39927 1 +    295523 G
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3643742 1 +  18214204 G
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5033390 1 -   6340057 G
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1071529 1 -   1292953 G
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188160413 1 - 188283584 G
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              3503 1 +     25005 G
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47517785 1 +  47705337 G
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 71776 1 -    104429 G
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   10308 1 +     14967 G
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 6173 1 -      7628 G
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    121417 1 -    135482 G
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          10843 1 -     23713 G
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           11983 1 +     61070 G
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       2261 1 +     49596 G
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4955470 1 -   8017169 A
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    17323 1 -     36578 G
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              2952 1 +      8220 G
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            99572 1 +    112873 G
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           9423 1 +     21690 G
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       26108 1 +     44506 G
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        26321 1 +     67491 G
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      16560 1 -     98129 G
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     26161 1 +    147771 G
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         2796 1 -     43940 G
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          6879 1 -     55515 G
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         26233 1 +    152463 G
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       4041 1 -    119457 G
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         15956 1 +    134592 G
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          26543 1 -     75465 G
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              191156 1 -    373494 G
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19811803 1 +  19899266 G
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                3971 1 -      9567 T
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6852774 1 +  12164890 G
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coronatus.k141_1353159                         7860 1 +     11805 G
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           47195 1 +     52369 G
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         39582 1 -     44753 G
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            21505 1 +     27322 G
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       21153 1 -     53241 G
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         43416 1 -     48185 G
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           38260 1 +     77221 A
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            6119 1 -     27784 G
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        250326 1 -    344369 G
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Puma_concolor.QAVW01000427.1                          131540038 1 - 161321710 G
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                20512 1 +     68503 G
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13917671 1 +  90463843 a
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1792630 1 +   2252614 g
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                       922 1 -      4338 G
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15676564 1 -  43202129 G
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        8477 1 +     34089 G
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              8417 1 -     60842 G
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              8511 1 +     67014 G
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              8488 1 +     60816 G
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 8425 1 -     76454 G
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17345212 1 -  30362882 G
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         24533 1 -     62485 G
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   39649 1 -    114521 A
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  105040 1 -    120886 A
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            23574 1 +    739146 T
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17770030 1 -  27805282 g
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2244074 1 +   2842873 a
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             238840 1 -    276980 G
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            33232 1 +     62062 G
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189275014 1 + 218635234 G
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        18826 1 -  13920577 G
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                2346 1 +     20549 G
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               17311 1 +     45698 T
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      810810 1 +   1148477 G
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  61452 1 +     99546 G
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194011946 1 - 194193292 G
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                   421 1 -      3104 A
i Tolypeutes_matacus.TolMat_scaffold_475685             I 14 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  138113 1 -    259118 G
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trichechus_manatus.JH594618.1                          16089869 1 +  31416278 G
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2797780 1 -   3938065 G
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    9715 1 +     13056 G
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69317215 1 -  96451834 G
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                     116 1 +    136657 A
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 C 0
s Ursus_maritimus.KK498671.1                              6520743 1 +  28682327 G
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  9417 1 -     20643 G
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             28952 1 -     33872 G
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1528254 1 -   2331223 g
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                144427 1 -    281493 A
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       131569 1 -    134049 A
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        219896 1 -    227762 G
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            1962 1 -     13665 G
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Erinaceus_europaeus.JH835290.1                         11541328 4 +  16010500 I
e Ochotona_princeps.JH802095.1                            4999348 675 -  23139505 I
e Tragulus_javanicus.TraJav_scaffold_14717                   9488 743 +     90398 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Equus_przewalskii.ATBW01073585.1                          16581 0 +     92910 C
e Equus_caballus.CM000402.2                              13355091 0 +  41866177 C
e Equus_asinus.JREZ01000062.1                             5856591 0 -   7175178 C
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Echinops_telfairi.JH980316.1                           22999931 2 -  44670279 I
e Zapus_hudsonius.ZapHud_scaffold_256618                      408 0 -      2259 C
e Jaculus_jaculus.JH725517.1                              8577673 0 +  11848649 C
e Allactaga_bullata.AllBul_scaffold_141108                    666 0 -      7259 C
e Trachypithecus_pileatus.k141_1022309                       5226 0 +     13828 C
e Trachypithecus_phayrei.ctg3                            44662914 0 -  44834318 C
e Trachypithecus_obscurus.k141_1115109                       8130 0 -     28054 C
e Trachypithecus_melamera.k141_699241                        2986 0 -     24393 C
e Trachypithecus_leucocephalus.k141_381681                   3005 0 +     12481 C
e Trachypithecus_laotum.k141_760702                          4719 0 +     14371 C
e Trachypithecus_hatinhensis.k141_504423                     6067 0 -     15592 C
e Trachypithecus_germaini.k141_868450                        3883 0 -     11566 C
e Trachypithecus_geei.k141_670367                           46082 0 -     54611 C
e Trachypithecus_francoisi.k141_768164                       4689 0 -     14244 C
e Trachypithecus_cristatus.k141_1011511                      5261 0 -     12939 C
e Trachypithecus_crepusculus.k141_1588528                   23360 0 -     32910 C
e Trachypithecus_auratus.k141_738098                        29800 0 +     38948 C
e Tarsius_wallacei.k141_48636                               64696 0 +     65473 C
e Tarsius_lariang.k141_609102                               31387 0 +     42269 C
e Semnopithecus_vetulus.k141_1143185                        16479 0 +     30600 C
e Semnopithecus_schistaceus.k141_387461                     33457 0 +     42640 C
e Semnopithecus_priam.k141_410937                           40312 0 +     46263 C
e Semnopithecus_johnii.k141_785014                         121532 0 +    130994 C
e Semnopithecus_hypoleucos.k141_761524                      11528 0 +     20762 C
e Semnopithecus_entellus.k141_1572367                        6153 0 +     15331 C
e Rhinopithecus_strykeri.ctg4                            44859307 0 -  45163003 C
e Rhinopithecus_bieti.k119_554384                            2917 0 -     17045 C
e Pygathrix_nigripes_a.k141_101123                             8537 0 +     18040 C
e Pygathrix_nigripes_b.ctg79                                 6809148 0 +   6970761 C
e Pygathrix_cinerea.k141_374971                             32651 0 +     56732 C
e Propithecus_coquerelli.NW_012147863.1                     21633 0 -     30946 C
e Presbytis_mitrata.k141_860013                              8661 0 +     14865 C
e Presbytis_comata.k141_672698                               8546 0 -     15069 C
e Pithecia_vanzolinii.k141_831006                           15424 0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514 0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521 0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292 0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093 0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038 0 +     78826 C
e Pithecia_albicans.k141_991845                             45662 0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000036.1               26743271 0 +  26888534 C
e Piliocolobus_kirkii.k141_929665                            4788 0 +      7694 C
e Piliocolobus_gordonorum.k141_1270531                       5421 0 -     17985 C
e Piliocolobus_badius.k141_1987485                           4802 0 -      5908 C
e Octodon_degus.JH651621.1                                3687420 1881 +  10294119 I
e Nasalis_larvatus.k141_153429                              11264 0 +     48152 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     91920 1922 -    117718 I
e Hystrix_cristata.HysCri_scaffold_50788                     7688 1865 +     22540 I
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 32592 1717 -     67205 I
e Ctenodactylus_gundi.CteGun_scaffold_447                  214275 0 -    956709 C
e Colobus_polykomos.k141_1406057                            19335 0 +     23629 C
e Colobus_guereza.LG08                                  147667351 0 + 156195979 C
e Colobus_angolensis.KN985967.1                          10889423 0 +  10971483 C
e Cephalopachus_bancanus.k141_702587                        12545 0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530 0 +    345090 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               17550  6 +    209709 AA-------------A-ATC
s Acinonyx_jubatus.LLWD01000356.1                         2039514  6 +   3721120 AA-------------A-ATC
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    117773  7 -    189883 AA-------------ATATC
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10663471  6 +  23371972 AA-------------A-ATC
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7100005  7 -  16596857 AA------------AA-ATC
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   5423  6 -     60446 AA-------------A-ATC
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         6140  6 -     29318 AA-------------A-ATC
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         5078  6 +     38766 AA-------------A-ATC
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          6034  6 -     80423 AA-------------A-ATC
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              1006  6 +     19852 AA-------------A-ATC
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                3262  6 -     12443 AA-------------A-ATC
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                              561  6 +      5070 AA-------------A-ATC
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                  306  6 -      1641 AA-------------A-ATC
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          3045  6 -     24210 AA-------------A-ATC
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           29627  6 -     30219 AA-------------A-ATC
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_405616                              5463  6 +     16794 AA-------------A-ATC
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                             595  6 -      1470 AA-------------A-ATC
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             4740  6 -      9835 AA-------------A-ATC
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3525521  6 +   4113121 AA-------------A-ACC
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      392557  6 -    631301 AG-------------A-ATC
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             2952  6 +     55446 AT-------------A-ATC
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 66353  6 +     78111 AA-------------A-ATC
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            9299  6 +     22701 AA-------------A-ATC
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5753257  6 +   9889416 aa-------------a-atc
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             9855  6 -    104377 AA-------------A-ATC
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               9862  6 +     23246 AA-------------A-ATC
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     2393  6 +     11424 AA-------------A-ATA
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        6470  6 +      9265 AA-------------A-ATT
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                10982  6 -     29036 AG-------------A-ATC
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9543149  6 +  39197703 AA-------------A-ATC
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             64422  6 +     85812 AA-------------A-ATC
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                15435  6 +     89302 AA-------------A-ATC
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             19936  6 -     58268 AA-------------A-ATC
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             67930  6 +    119057 AA-------------A-ATC
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               9899  6 -     25888 AA-------------A-ATC
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                10954  6 -     16375 AA-------------A-ATC
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               4570  6 +      6337 AA-------------A-ATC
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26384005  6 +  51448160 AC-------------A-ATC
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        9178  6 -     13118 AC-------------A-ATC
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   47983  6 -     72089 AA-------------A-ACC
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   302127  6 -   6870073 AA-------------A-ATC
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22956225  6 + 161108492 AA-------------A-ATC
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     418490  6 +    998990 AA-------------A-ATC
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22664879  6 + 158972876 AA-------------A-ATC
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               674643  6 +   1914593 AA-------------A-ATC
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               117802  6 -    171031 AA-------------A-ATC
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 16822  6 +    125063 AA-------------A-ATC
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                18869  6 -    216513 AA-------------A-ATC
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       11412  6 -    134917 AA-------------A-ATC
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3223147  6 -   8989139 aa-------------a-att
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           400848  6 -  15254737 aa-------------a-att
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2976585  6 +   6889770 aa-------------a-att
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11526348  6 +  39901454 AA-------------A-ATC
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   21322  6 +     87036 AA-------------A-ATC
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11273031  6 -  35597290 AA-------------A-ATC
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11095742  6 +  39895921 AA-------------A-ATC
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16462527  6 -  44759192 AA-------------A-ATC
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21333463  6 + 157394656 AA-------------A-ACC
i Capra_aegagrus.CM003214.1                             I 2862 C 0
s Capra_hircus.CM004562.1                               135711818  6 - 157403528 AA-------------A-ACC
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_529800                   218  6 -      2320 AG----------TTTC----
i Capromys_pilorides.CapPil_scaffold_529800             N 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               61975  6 +     67245 AG-------------A-ATC
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_417865                    189  6 -       402 AA-------------A-ATG
i Castor_canadensis.CasCan_scaffold_417865              C 0 I 13
s Catagonus_wagneri.CatWag_scaffold_1305                   162661  6 -    276539 AA-------------A-ATC
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15789677  6 -  24422027 AA----------AGTA----
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15801616  6 -  24440124 AA----------AGTA----
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       179788  6 +    436027 AA----------AGTA----
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18895526  6 -  29618158 AA-------------A-ATC
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                12175  6 -     26817 AA-------------A-ATC
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                16419  6 +     25043 AA-------------A-ATC
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4367580  6 +   7569818 AA-------------A-ATC
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         7337  6 -      9338 AA-------------A-ATC
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6559364  6 +   6739814 AA-------------A-ATC
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      30841  6 +     60454 AA-------------A-ATC
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          6045  6 -     21101 AA-------------A-ATC
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         63355  6 -    107033 AA-------------A-ATC
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        6218  6 -     17608 AA-------------A-ATC
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          3383  6 +     45019 AA-------------A-ATC
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           3443  6 +     15177 AA-------------A-ATC
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          6265  6 +     16677 AA-------------A-ATC
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           28455  6 +     35983 AA-------------A-ATC
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11994986  6 +  12117833 AA-------------A-ATC
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46481747  6 +  46592721 AA-------------A-ATC
i Cercopithecus_mona.ctg12                              C 0 I 215
s Cercopithecus_neglectus.k141_2169300                         79  6 -     27215 AA-------------A-ATC
i Cercopithecus_neglectus.k141_2169300                  I 78 C 0
s Cercopithecus_nictitans.k141_1129315                       6279  6 +     35577 AA-------------A-ATC
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        6073  6 -     25661 AA-------------A-ATC
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        6030  6 -     17744 AA-------------A-ATC
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        25614  3 +     37128 AA-------------A----
i Cercopithecus_roloway.k141_2263608                    C 0 I 15
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           4585  6 -      6963 AA-------------A-AAA
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           63179  6 -     68416 AA-------------C-ATC
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                           12285  6 +     13308 AA-------------C-ATC
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             9460  6 -     18223 AA-------------A-ATC
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              1199  6 +    188999 AA-------------A-ATC
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           45497  6 +     57117 AA-------------A-ATC
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          50177  6 +     54541 AA-------------A-ATC
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15964361 16 +  43084221 aaaatattaagatttc----
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         74981  6 +    196370 AA-------------A-ATC
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          19162  6 +     40510 AA-------------A-ATC
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15143799  6 -  15256731 AA-------------A-ATC
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      38263  6 -     53260 AA-------------A-ATC
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101148822  6 + 101219884 AA-------------A-ATC
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                18690  6 -     21363 AA-------------A-AAA
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           763994  6 +    964067 aa-------------a-aaa
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_629495              2266  6 -      3120 GA-------------T-CTG
i Chrysochloris_asiatica.ChrAsi_scaffold_629495         C 0 I 3
s Condylura_cristata.JH655880.1                          60622197  6 +  78930452 AA-------------C-AGC
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         2171  6 -      5782 AA-------------A-ATC
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 I 2
s Cricetomys_gambianus.CriGam_scaffold_949                 282649  6 -    399297 AA-------------A-ATC
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53035020  6 +  72327488 AA-------------C-AGC
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              1609  6 -     22648 CA-------------T-ATG
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            57500  6 -     70449 AA-------------A-ATC
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  214275  4 -    956709 ---------------A-CTC
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 34309  6 -     67205 AG----------TTTC----
i Ctenomys_sociabilis.CteSoc_scaffold_19489             I 1717 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                20849  6 +     26546 AA----------AATA----
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             61989  6 -    236241 AA----------AATA----
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          185663  6 -   6883506 aa-------------a-aaa
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16849114  6 +  31942871 AA-------------A-ATC
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80040628  6 -  96802777 AC-------------A-ATC
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18701191  6 -  18957592 AG-------------A-ATC
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 326227  6 +    993696 AA-------------A-ATC
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   6868  6 +    151128 AA-------------A-ATC
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   159623 16 +    228994 CAAATATTAAGAATTC----
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3660181  6 +   4240102 AA-------------A-ATG
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  2529  6 -     11986 AA-------------A-ATG
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                39956  6 -     73477 AA----------AGTA----
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1496199  6 +   1727528 AA-------------A-ATC
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7832993  6 +  15467074 GA-------------T-CTG
i Elephantulus_edwardii.JH947210.1                      C 0 I 3
s Ellobius_lutescens.LOEQ01003611.1                        243813  6 -    369425 CA-------------A-ATC
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Enhydra_lutris.KZ291749.1                              85877467  7 +  99434291 AA------------AA-ATC
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4708948  6 +   6522550 TA-------------A-ATC
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Erythrocebus_patas.Contig8                             48780832  6 -  48907691 AA-------------A-ATC
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          318848  6 +    330699 AC-------------A-ATC
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             65305  6 +     89355 AC-------------A-ATC
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              9267  6 +     13586 AA-------------A-ATC
i Eulemur_albifrons.k141_715837                         I 2 C 0
s Eulemur_collaris.k141_1015201                              2529  6 -      4292 AA-------------A-ATC
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            15662  6 +     36558 AA-------------A-ATC
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            11987  6 +     60246 AA-------------A-ATC
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                15470  6 +    109717 AA-------------A-ATC
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 3455  6 -     19505 AA-------------A-ATC
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                20128  6 +     27497 AA-------------A-ATC
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           22583  6 +     26808 AA-------------A-ATC
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                37318  6 +     46535 AA-------------A-ATC
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              20057  6 -     29447 AA-------------A-ATC
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.AANG03133801.1                                  553  6 -       736 AA-------------A-ATC
i Felis_catus.AANG03133801.1                            C 0 C 0
s Felis_catus_fca126.CM031420.1                         129285909  6 - 158578461 AA-------------A-ATC
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 27008  6 +     52776 AA-------------A-ATC
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13896135  6 -  19261668 AA----------AATG----
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     215317  6 -    847004 AA-------------A-ATT
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           17678  6 -     43889 AA-------------A-ATT
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          14823  6 +     27357 AA-------------A-ATT
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               159565  6 +    324696 AA-------------A-ATC
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    185997  6 -    189561 AA-------------A-ATC
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           16460  8 -     18683 AA-----------AAA-ACC
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               9248  6 -     14630 AA-------------A-ATC
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119656348  6 - 195582420 AA-------------A-ATC
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   79777  9 +    118900 AA----------AAAA-ACC
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         6049  6 +     10286 AA-------------A-ATC
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             4527  6 -     11661 AA-------------A-ATC
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             9854  6 +     56096 AA-------------A-ATC
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        33103  6 -     42470 AA-------------A-ATC
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        49726  6 -     54384 AA-------------A-ATC
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              22641  6 +     53719 AA-------------A-ATC
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                32868  6 -     91191 AA-------------A-ACC
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2560626  6 +  31725842 aaaat----------a----
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               62867  6 +     73687 AA-------------A-ATC
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 I 3
s Hippopotamus_amphibius.HipAmp_scaffold_1308              150631  6 +    277961 AA-------------A-ATC
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      283029  6 -    477199 aa-------------a-atc
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_7653                5592  6 +     86108 AA-------------A-ATC
i Hipposideros_galeritus.HipGal_scaffold_7653           C 0 I 12
s Hoolock_leuconedys.ctg315                                   350253  6 +    431944 AA-------------A-ATC
i Hoolock_leuconedys.ctg315                                C 0 I 11
s Hyaena_hyaena.HyaHya_flattened_line_20729                 23110  6 -     67322 AA-------------A-ATC
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           21241  6 -    119109 AA----------AGTA----
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_1816750                             1734  6 +      3202 AA-------------A-ATC
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1633646                              1704  6 -      2102 AA-------------A-ATC
i Hylobates_agilis.k141_1633646                         C 0 C 0
s Hylobates_klossii.k141_468230                              3221  6 +      5464 AA-------------A-ATC
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14628569  6 -  25970782 AA-------------A-ATC
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            1120  6 +      4161 AA-------------A-ATC
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             37430  6 -     60944 AA-------------A-ATC
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7130371  6 +  13083262 aa-------------a-att
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   1526  6 +      3484 AA-------------A-ATC
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              12840  6 +     17520 AC-------------A-ATC
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               27459  6 +     37189 AC-------------G-ATC
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          54017  6 -    147782 AA-------------A-ATC
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    5560  6 +     26176 TA-------------A-ATC
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258411401  6 - 285822530 AA-------------A-ATC
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        28716  6 +     39228 AA-------------C-ATC
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            58080  6 +     63517 AA-------------C-ATC
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        36460  6 -     38897 AA-------------C-ATC
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      2506  6 -     13103 AA-------------C-ATC
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3091444  6 -   3498232 aa-------------a-att
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    20867  6 +     22452 AA-------------A-TTC
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            139774  6 +   3060487 AC-------------A-ATC
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19252453  6 +  19376315 AA-------------A-ATC
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           15268  6 +     84689 AA-------------A-ATT
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3783007  6 +   6799190 AA-------------A-ATT
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20598794  6 -  62548349 AC-------------A-ATC
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11095198  6 +  39895028 AA-------------A-ATC
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             24204  6 +     74745 AA-------------A-ATC
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12710665  6 +  12821369 AA-------------A-ATC
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                3238  6 -     26467 AA-------------A-ATC
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           51109  6 +     63263 AA-------------A-ATC
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 3219  6 -     26361 AA-------------A-ATC
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 6409  6 -      7381 AA-------------A-ATC
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  49638  6 -     79256 AA-------------A-ATC
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196039736  6 + 196197964 AA-------------A-ATC
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11449906  6 +  11645122 AA-------------A-ATC
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   8592  6 -     46448 AA-------------A-ATC
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                6255  6 -     13212 AA-------------A-ATC
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 19935  6 -     55006 AA-------------A-ATC
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43845050  6 +  43892939 AA-------------A-ATC
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               21219  6 -     24607 AA-------------A-ATC
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               8589  6 -     27140 AA-------------A-ATC
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43441625  6 -  43563597 AA-------------A-ATC
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4454429  6 -   4543643 AA-------------A-ATC
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            152203  1 +    252755 A-------------------
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             39793  1 +     58827 A-------------------
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36878243  6 +  64221397 aa-------------a-att
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       65595  6 -    234502 AA-------------C-ATC
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             6359  7 -     87323 AA------------AA-ATC
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 1266  6 +    115071 AA-------------A-ATC
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1051539  6 -  26018355 AA-------------T-ATC
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    2431  6 -     12939 AC-------------A-ATC
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16514459  6 +  47401472 AA-------------C-ATC
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  41490  6 -     48017 AG-------------T-GTG
i Microgale_talazaci.MicTal_scaffold_34660              C 0 I 3
s Micronycteris_hirsuta.MicHir_scaffold_37978               24938  6 -     32043 AA-------------A-ATC
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22824617  6 -  98408828 CA-------------A-ATC
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8212996  7 +  10048721 AA------------AA-ATC
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            37485  7 +     45743 AA------------AA-ATC
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         6171  6 +     29742 AA-------------A-ATC
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        16940  6 -    104932 AA-------------A-ATT
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     5141  6 -     12809 AA-------------C-ATC
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 150221  6 +    154973 AC-------------A-ATC
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                163476  6 +    265003 AG-------------A-TTC
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  6217  6 -     19904 AA-------------A-ATC
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  150316  6 -    168139 AA-------------A-ATC
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          24410  6 -    100666 TA-------------A-ATC
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70771836  6 +  92629107 aa-------------a-atc
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75493890  6 +  98207768 AA-------------A-ATC
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67560642  6 +  89017189 aa-------------a-atc
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74336616  6 +  97876770 AA-------------C-ATC
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             14862  9 +     98495 AG----------AAAA-GCC
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4428198  7 -  28371801 AA------------AA-ATC
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     93842  6 -    117718 AG----------TTTC----
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 1922 C 0
s Myotis_brandtii.KE161952.1                               971282  6 +   8389877 TA-------------A-ATC
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5022703  6 +   6462685 TA-------------A-ATC
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3468786  6 -   3747815 TA-------------A-ATC
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        14027  6 +     66751 TA-------------A-ATC
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             7639  6 -      8794 AA-------------A-AAT
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            120368  6 +    362372 AA-------------A-ATC
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4490338  6 -  14209539 aa-------------a-att
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3954812  6 -   4490290 AC-------------A-ATG
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  50535  6 +     94413 AG-------------C-ATC
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_762468                             239  6 -      2755 AA-------------A-ATC
i Nomascus_annamensis.k141_762468                       C 0 C 0
s Nomascus_concolor.k141_70405                                859  6 +      1153 AA-------------A-ATC
i Nomascus_concolor.k141_70405                          C 0 C 0
s Nomascus_gabriellae.k141_1400361                            790  6 -      2203 AA-------------A-ATC
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_1022                             814  6 -     11638 AA-------------A-ATC
i Nomascus_siki_b.tarseq_1022                       C 0 C 0
s Nomascus_siki_a.k141_421408                                   704  6 +     16235 AA-------------A-ATC
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                38063  6 +   3668941 AA-------------A-ATC
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65571943  6 -  95554990 aa-------------a-att
i Nycticebus_bengalensis.LG16                           I 112 C 0
s Nycticebus_coucang.k141_771591                            15353  6 +     16181 aa-------------a-att
i Nycticebus_coucang.k141_771591                        I 113 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65680131  6 +  89412551 aa-------------a-att
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     I 104 C 0
s Octodon_degus.JH651621.1                                3689301  6 +  10294119 ag-ct-t--------c----
i Octodon_degus.JH651621.1                              I 1881 C 0
s Odobenus_rosmarus.KB229369.1                             685041  6 -   3126709 AA-------------A-ATT
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1083649  6 +   1425656 AA-------------A-ATC
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         41732  5 +     78940 A--------------A-ATC
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  130413  6 +    145789 CA-------------A-ATC
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  43107  6 +     62360 GA-------------A-ATC
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7228487  6 -   7562323 AC-------------A-ATC
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              64262  6 -     66828 AA-------------A-ATC
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 I 3
s Oryctolagus_cuniculus.CM000803.1                      141883882  6 + 163896628 AA-------------A-TTC
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      315201  6 -    505867 AA-------------A-ATC
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        5179  6 -     53940 AA-------------A-ATT
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18013152  6 -  38779656 AA-------------A-ATT
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134082654  6 - 275406953 AA-------------A-ACC
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      83888  6 +    140051 AA-------------A-ACC
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127578527  6 - 205426864 AA-------------A-ATC
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120155687  6 - 196562556 AA-------------A-ATC
i Pan_troglodytes.CM009241.2                            C 0 I 10
s Panthera_onca.PanOnc_flattened_line_1615                  39928  6 +    295523 AA-------------A-ATC
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3643743  6 +  18214204 AA-------------A-ATC
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5033391  6 -   6340057 AA-------------A-ATC
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1071530  6 -   1292953 AA-------------A-ACC
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188160414  6 - 188283584 AA-------------A-ATC
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              3504  6 +     25005 AA-------------A-ATC
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47517786  6 +  47705337 AA-------------A-ATC
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 71777  6 -    104429 AA-------------A-ATC
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   10309  6 +     14967 AA-------------A-ATC
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 6174  6 -      7628 AA-------------A-ATC
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    121418  3 -    135482 -----------------ATC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          10844  6 -     23713 AA-------------A-ACT
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           11984  6 +     61070 AA-------------A-ACT
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       2262  6 +     49596 AA-------------A-TTC
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4955471  6 -   8017169 GA-------------A-ATC
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    17324  6 -     36578 AA----------AACA----
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              2953  6 +      8220 AC-------------A-ATG
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            99573  6 +    112873 TA-------------A-ATC
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           9424  6 +     21690 AC-------------A-ATC
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       26109  6 +     44506 AA-------------A-ATC
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        26322  6 +     67491 AA-------------A-ATC
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      16561  6 -     98129 AA-------------A-ATC
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     26162  6 +    147771 AA-------------A-ATC
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         2797  6 -     43940 AA-------------A-ATC
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          6880  6 -     55515 AA-------------A-ATC
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         26234  6 +    152463 AA-------------A-ATC
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       4042  6 -    119457 AA-------------A-ATC
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         15957  6 +    134592 AA-------------A-ATC
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          26544  6 -     75465 AA-------------A-ATC
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              191157  6 -    373494 AA-------------A-ATC
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19811804  6 +  19899266 AA-------------A-ATC
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                3972  6 -      9567 AA-------------A-ATC
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 I 3
s Prolemur_simus.MPIZ01000048.1                           6852775  6 +  12164890 AA-------------A-ATC
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coronatus.k141_1353159                         7861  6 +     11805 AA-------------A-ATC
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           47196  6 +     52369 AA-------------A-ATC
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         39583  6 -     44753 AA-------------A-ATC
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            21506  6 +     27322 AA-------------A-ATC
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       21154  6 -     53241 AA-------------A-ATC
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         43417  6 -     48185 AA-------------A-ATC
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           38261  6 +     77221 AA-------------A-ATC
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            6120  6 -     27784 AG-------------A-ATC
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        250327  7 -    344369 AA------------AA-ATC
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Puma_concolor.QAVW01000427.1                          131540039  6 - 161321710 AA-------------A-ATC
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                20513  6 +     68503 AA-------------A-ATC
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13917672  6 +  90463843 aa-------------a-atc
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1792631  6 +   2252614 aa-------------a-atc
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                       923  6 -      4338 AA-------------A-ATC
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15676565  6 -  43202129 AA-------------A-ATC
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        8478  6 +     34089 AA-------------A-ATC
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              8418  6 -     60842 AA-------------A-ATC
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              8512  6 +     67014 AA-------------A-ATC
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              8489  6 +     60816 AA-------------A-ATC
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 8426  6 -     76454 AA-------------A-ATC
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17345213  6 -  30362882 AA-------------A-ATC
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         24534  6 -     62485 AA-------------A-ATC
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   39650  6 -    114521 AA-------------C-ATC
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  105041  6 -    120886 AA-------------A-ATC
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            23575  6 +    739146 AA-------------T-ATC
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17770031  6 -  27805282 aa-------------t-atg
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2244075  6 +   2842873 aa-------------a-att
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             238841  7 -    276980 AA------------AA-ATC
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            33233  6 +     62062 AA-------------A-GTC
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189275015  6 + 218635234 AA-------------A-ATC
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        18827  6 -  13920577 AA-------------A-ATC
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                2347  6 +     20549 AA-------------A-ATC
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               17312  6 +     45698 AA-------------A-AAT
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      810811  6 +   1148477 AA-------------A-ATC
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  61453  6 +     99546 AA-------------A-ATC
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194011947  6 - 194193292 AA-------------A-ATC
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                   422  6 -      3104 AA-------------A-AAA
i Tolypeutes_matacus.TolMat_scaffold_475685             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  138114  6 -    259118 AG-------------A-ATC
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trichechus_manatus.JH594618.1                          16089870  6 +  31416278 AA-------------A-ATC
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2797781  6 -   3938065 AA-------------A-ATT
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    9716  6 +     13056 AA-------------A-ATT
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69317216  6 -  96451834 AC-------------A-ATC
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                     117  6 +    136657 AA-------------T-GCC
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 C 0
s Ursus_maritimus.KK498671.1                              6520744  6 +  28682327 AA-------------A-ATC
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  9418  6 -     20643 AA-------------A-ATC
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             28953  6 -     33872 AA-------------A-ATC
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1528255  6 -   2331223 aa-------------a-att
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                144428  6 -    281493 AA-------------A-ATC
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       131570  6 -    134049 AA-------------A-ATT
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        219897  6 -    227762 AA-------------A-ATT
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            1963  6 -     13665 AC-------------A-ATC
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Erinaceus_europaeus.JH835290.1                         11541328  4 +  16010500 I
e Ochotona_princeps.JH802095.1                            4999348 675 -  23139505 I
e Tragulus_javanicus.TraJav_scaffold_14717                   9488 743 +     90398 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Equus_przewalskii.ATBW01073585.1                          16581  0 +     92910 C
e Equus_caballus.CM000402.2                              13355091  0 +  41866177 C
e Equus_asinus.JREZ01000062.1                             5856591  0 -   7175178 C
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Echinops_telfairi.JH980316.1                           22999931  2 -  44670279 I
e Zapus_hudsonius.ZapHud_scaffold_256618                      408  0 -      2259 C
e Jaculus_jaculus.JH725517.1                              8577673  0 +  11848649 C
e Allactaga_bullata.AllBul_scaffold_141108                    666  0 -      7259 C
e Trachypithecus_pileatus.k141_1022309                       5226  0 +     13828 C
e Trachypithecus_phayrei.ctg3                            44662914  0 -  44834318 C
e Trachypithecus_obscurus.k141_1115109                       8130  0 -     28054 C
e Trachypithecus_melamera.k141_699241                        2986  0 -     24393 C
e Trachypithecus_leucocephalus.k141_381681                   3005  0 +     12481 C
e Trachypithecus_laotum.k141_760702                          4719  0 +     14371 C
e Trachypithecus_hatinhensis.k141_504423                     6067  0 -     15592 C
e Trachypithecus_germaini.k141_868450                        3883  0 -     11566 C
e Trachypithecus_geei.k141_670367                           46082  0 -     54611 C
e Trachypithecus_francoisi.k141_768164                       4689  0 -     14244 C
e Trachypithecus_cristatus.k141_1011511                      5261  0 -     12939 C
e Trachypithecus_crepusculus.k141_1588528                   23360  0 -     32910 C
e Trachypithecus_auratus.k141_738098                        29800  0 +     38948 C
e Tarsius_wallacei.k141_48636                               64696  0 +     65473 C
e Tarsius_lariang.k141_609102                               31387  0 +     42269 C
e Semnopithecus_vetulus.k141_1143185                        16479  0 +     30600 C
e Semnopithecus_schistaceus.k141_387461                     33457  0 +     42640 C
e Semnopithecus_priam.k141_410937                           40312  0 +     46263 C
e Semnopithecus_johnii.k141_785014                         121532  0 +    130994 C
e Semnopithecus_hypoleucos.k141_761524                      11528  0 +     20762 C
e Semnopithecus_entellus.k141_1572367                        6153  0 +     15331 C
e Rhinopithecus_strykeri.ctg4                            44859307  0 -  45163003 C
e Rhinopithecus_bieti.k119_554384                            2917  0 -     17045 C
e Pygathrix_nigripes_a.k141_101123                             8537  0 +     18040 C
e Pygathrix_nigripes_b.ctg79                                 6809148  0 +   6970761 C
e Pygathrix_cinerea.k141_374971                             32651  0 +     56732 C
e Propithecus_coquerelli.NW_012147863.1                     21633  0 -     30946 C
e Presbytis_mitrata.k141_860013                              8661  0 +     14865 C
e Presbytis_comata.k141_672698                               8546  0 -     15069 C
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000036.1               26743271  0 +  26888534 C
e Piliocolobus_kirkii.k141_929665                            4788  0 +      7694 C
e Piliocolobus_gordonorum.k141_1270531                       5421  0 -     17985 C
e Piliocolobus_badius.k141_1987485                           4802  0 -      5908 C
e Nasalis_larvatus.k141_153429                              11264  0 +     48152 C
e Hystrix_cristata.HysCri_scaffold_50788                     7688 1865 +     22540 I
e Colobus_polykomos.k141_1406057                            19335  0 +     23629 C
e Colobus_guereza.LG08                                  147667351  0 + 156195979 C
e Colobus_angolensis.KN985967.1                          10889423  0 +  10971483 C
e Cephalopachus_bancanus.k141_702587                        12545  0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530  0 +    345090 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               17556 11 +    209709 T-TAA---TC---A----------TT-T-T
s Acinonyx_jubatus.LLWD01000356.1                         2039520 12 +   3721120 T-TAG---TC---T----------TCCT-T
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    117780 12 -    189883 T-TAA---AC---A----------TACT-C
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10663477 12 +  23371972 T-TAG---TC---T----------TCCT-T
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7100012 12 -  16596857 T-TGG---TT---T----------TCCT-T
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   5429 11 -     60446 T-TAA---TC---T----------TT-T-T
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         6146 11 -     29318 T-TAA---TC---T----------TT-T-T
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         5084 11 +     38766 T-TAA---TC---T----------TT-T-T
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          6040 11 -     80423 T-TAA---TC---T----------TT-T-T
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              1012 12 +     19852 T-TAA---TC---TT---------TT-T-T
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                3268 11 -     12443 T-TAA---TC---T----------TT-T-T
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                              567 11 +      5070 T-TAA---TC---T----------TT-T-T
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                  312 11 -      1641 T-TAA---TC---T----------TT-T-T
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          3051 11 -     24210 T-TAA---TC---T----------TT-T-T
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           29633 11 -     30219 T-TAA---TC---T----------TT-T-T
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_405616                              5469 11 +     16794 T-TAA---TC---T----------TT-T-T
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                             601 11 -      1470 T-GAA---TC---T----------TT-T-T
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             4746 11 -      9835 T-TAA---TC---T----------TT-T-T
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3525527  6 +   4113121 T-TAA---TC--------------------
i Ammotragus_lervia.NIVO01013474.1                      C 0 I 2
s Anoura_caudifer.AnoCau_scaffold_422                      392563 12 -    631301 T-TAA---TG---T----------TTCT-T
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             2958  6 +     55446 T-TAA---TC--------------------
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 I 2
s Aotus_azarae.k141_3170768                                 66359 11 +     78111 T-TAA---T---CA----------TT-T-T
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            9305 11 +     22701 T-TAA---T---CA----------TT-T-T
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5753263 11 +   9889416 t-taa---t---ca----------tt-t-t
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             9861 11 -    104377 T-TAA---T---CA----------TT-T-T
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               9868 11 +     23246 T-TAA---T---CA----------TT-T-T
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     2399 12 +     11424 T-TAA---TC---T----------TACT-T
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        6476 11 +      9265 G-TAA---TC---T----------TC-C-T
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                10988 12 -     29036 T-TAA---TG---T----------TCCT-T
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9543155 11 +  39197703 T-TAA---TC---T----------TT-T-T
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             64428 11 +     85812 T-TAA---TC---T----------TT-T-T
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                15441 11 +     89302 T-TAA---TC---T----------TT-T-T
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             19942 11 -     58268 T-TAA---TC---T----------TT-T-T
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             67936 11 +    119057 T-TAA---TC---T----------TT-T-T
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               9905 11 -     25888 T-TAA---TC---T----------TT-T-T
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                10960 11 -     16375 T-TAA---TC---T----------TC-C-T
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               4576 11 +      6337 T-TAA---TC---T----------TC-C-T
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26384011 12 +  51448160 T-TAA---CC---T----------TCCT-T
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        9184 12 -     13118 T-TAA---CC---T----------TCCT-T
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   47989  6 -     72089 T-TAA---TC--------------------
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 I 2
s Bison_bison.KN264915.1                                   302133  6 -   6870073 T-TAA---TC--------------------
i Bison_bison.KN264915.1                                C 0 I 2
s Bos_indicus.CM003021.1                                 22956231  6 + 161108492 T-TAA---TC--------------------
i Bos_indicus.CM003021.1                                C 0 I 2
s Bos_mutus.JH883513.1                                     418496  6 +    998990 T-TAA---TC--------------------
i Bos_mutus.JH883513.1                                  C 0 I 2
s Bos_taurus.CM000177.6                                  22664885  6 + 158972876 T-TAA---TC--------------------
i Bos_taurus.CM000177.6                                 C 0 I 2
s Bubalus_bubalis.KI419065.1                               674649  6 +   1914593 T-TAC---TC--------------------
i Bubalus_bubalis.KI419065.1                            C 0 I 2
s Cacajao_ayresi.k141_724503                               117808 11 -    171031 T-TAA---TC---A----------TT-T-T
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 16828 11 +    125063 T-TAA---TC---A----------TT-T-T
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                18875 11 -    216513 T-TAA---TC---A----------TT-T-T
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       11418 11 -    134917 T-TAA---TC---A----------TT-T-T
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3223153 12 -   8989139 t-taa---tc---t----------tatt-t
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           400854 12 -  15254737 t-taa---tc---t----------tatt-t
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2976591 12 +   6889770 t-taa---tc---t----------tatt-t
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11526354 11 +  39901454 T-TA----TC---T----------TCCT-T
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   21328 11 +     87036 T-TA----TC---T----------TCCT-T
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11273037 11 -  35597290 T-TA----TC---T----------TCCT-T
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11095748 11 +  39895921 T-TA----TC---T----------TCCT-T
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16462533 11 -  44759192 T-TA----TC---T----------TCCT-T
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21333469  6 + 157394656 T-TAA---TC--------------------
i Capra_aegagrus.CM003214.1                             C 0 I 2
s Capra_hircus.CM004562.1                               135711824  6 - 157403528 T-TAA---TC--------------------
i Capra_hircus.CM004562.1                               C 0 I 2
s Capromys_pilorides.CapPil_scaffold_529800                   224  9 -      2320 CTGGA---TA---A----------T-----
i Capromys_pilorides.CapPil_scaffold_529800             C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               61981 12 +     67245 T-TAA---TG---T----------TCCT-T
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_218148                    840 12 -      1057 T-TAA---CC---T----------TCCT-T
i Castor_canadensis.CasCan_scaffold_218148              n 13 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   162667 12 -    276539 T-TAA---TC---T----------TCCT-T
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15789683 18 -  24422027 T-TAA---CA---TTTCTTTGATAT-----
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15801622 18 -  24440124 T-TAA---CA---TTTCTTTGATAT-----
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       179794 18 +    436027 T-TAA---CA---TTTCTTTGATAT-----
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18895532 10 -  29618158 T-TAA---G----G----------TT-T-T
i Cebus_albifrons.Contig22                              C 0 T 895
s Cebus_olivaceus.k141_93739                                12181 10 -     26817 T-TAA---G----G----------TT-T-T
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                16425 10 +     25043 T-TAA---G----G----------TT-T-T
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4367586 12 +   7569818 T-TAA---TC---T----------TCCT-T
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         7343 12 -      9338 T-TAA---TC---T----------TCCT-T
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6559370 11 +   6739814 T-TAA---TC---T----------TT-T-T
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      30847 11 +     60454 T-TAA---TC---T----------TT-T-T
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          6051 11 -     21101 T-TAA---TC---T----------TT-T-T
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         63361 11 -    107033 T-TAA---TC---T----------TT-T-T
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        6224 11 -     17608 T-TAA---TC---T----------TT-T-T
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          3389 11 +     45019 T-TAA---TC---T----------TT-T-T
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           3449 11 +     15177 T-TAA---TC---T----------TT-T-T
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          6271 11 +     16677 T-TAA---TC---T----------TT-T-T
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           28461 11 +     35983 G-TAA---TC---T----------TT-T-T
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11994992 11 +  12117833 T-TAA---TC---T----------TT-T-T
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46481968 11 +  46592721 G-TAA---TC---T----------TT-T-T
i Cercopithecus_mona.ctg12                              I 215 C 0
s Cercopithecus_neglectus.k141_2169300                         85 11 -     27215 T-TAA---TC---T----------TT-T-T
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       6285 11 +     35577 T-TAA---TC---T----------TT-T-T
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        6079 11 -     25661 T-TAA---TC---T----------TT-T-T
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        6036 11 -     17744 T-TAA---TC---T----------TT-T-T
i Cercopithecus_pogonias.k141_3109732                   C 0 I 215
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           4591 12 -      6963 T-CAA---TC---T----------TCCT-T
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           63185 11 -     68416 T-TAA---TC---T----------TC-C-T
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                           12291 11 +     13308 T-TAA---TC---T----------TC-C-T
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             9466 11 -     18223 T-TAA---TC---T----------TT-T-T
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              1205  6 +    188999 T-TAA---TC--------------------
i Cheracebus_lugens.k141_996499                         C 0 I 4
s Cheracebus_regulus.k141_2128895                           45503 11 +     57117 T-TAA---TC---T----------TT-T-T
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          50183 11 +     54541 T-TAA---TC---T----------TT-T-T
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15964377  9 +  43084221 tTTGA---TA---A----------T-----
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         74987 11 +    196370 T-TAA---TC---A----------TT-T-T
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          19168 11 +     40510 T-TAA---TC---A----------TT-T-T
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15143805 11 -  15256731 T-AAA---TC---T----------TT-T-T
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      38269 11 -     53260 T-AAA---TC---T----------TT-T-T
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101148828 11 + 101219884 T-TAA---TC---T----------TT-T-T
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                18696 12 -     21363 A-TAA---TC---T----------CCCT-T
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           764000 12 +    964067 a-taa---tc---t----------cccT-T
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_629495              2275  6 -      3120 -------------C----------TCTT-G
i Chrysochloris_asiatica.ChrAsi_scaffold_629495         I 3 C 0
s Condylura_cristata.JH655880.1                          60622203 12 +  78930452 T-TAA---TC---T----------TCCC-T
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         2179  4 -      5782 -------------------------GCT-C
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    I 2 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 282655 12 -    399297 T-TAA---AC---A----------CATT-C
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53035026 12 +  72327488 T-TAA---AC---C----------TACT-C
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              1615 12 -     22648 T-C--ATC-T---T----------TCCT-T
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            57506 12 -     70449 T-TAG---TC---T----------TCCT-T
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  214279  5 -    956709 T-TAA---T---------------------
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 I 4
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 34315  9 -     67205 TTTGA---TA---A----------A-----
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                20855 18 +     26546 T-TAA---CA---TTTCTTTGATAT-----
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             61995 18 -    236241 T-TGA---CA---TTTCTTTGATAT-----
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          185669 12 -   6883506 t-taa---tc---t----------tcct-T
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16849120 11 +  31942871 T-TAA---TC---T----------TC-C-T
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80040634 12 -  96802777 T-TAA---CC---T----------TCCT-T
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18701197 12 -  18957592 T-TAA---TC---A----------TCCT-T
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 326233 12 +    993696 T-TAA---TC---T----------TCCT-T
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   6874 12 +    151128 T-TAA---TC---T----------TCTT-T
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   159639  9 +    228994 TTGGA---TA---A----------T-----
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3660187 13 +   4240102 T-TAA---TC---T----------TGCTTT
i Dipodomys_ordii.KN672545.1                            C 0 I 159
s Dipodomys_stephensi.DipSte_scaffold_84338                  2535 13 -     11986 C-TAA---TC---T----------TGCTTT
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 I 165
s Dolichotis_patagonum.DolPat_scaffold_14102                39962 18 -     73477 T-TAA---CA---TTTCTTTGATAT-----
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7833002  6 +  15467074 -------------T----------CCAT-G
i Elephantulus_edwardii.JH947210.1                      I 3 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1496205  6 +   1727528 T-TAA---TC--------------------
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 I 2
s Ellobius_lutescens.LOEQ01003611.1                        243819 12 -    369425 T-TAA---AC---A----------TAGT-C
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Enhydra_lutris.KZ291749.1                              85877474 12 +  99434291 T-TAG---TT---T----------TCCT-T
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4708954 12 +   6522550 T-TAA---TC---T----------TCCT-T
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11541332  2 +  16010500 ---------------------------t-c
i Erinaceus_europaeus.JH835290.1                        I 4 C 0
s Erythrocebus_patas.Contig8                             48780838 11 -  48907691 T-TAA---TC---T----------TT-T-T
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          318854 12 +    330699 T-TAA---CC---T----------TCCT-T
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             65311 12 +     89355 T-TAA---CC---T----------TCCT-T
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              9273 11 +     13586 T-TAA---TC---T----------TC-C-T
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_1015201                              2535 11 -      4292 T-TAA---TC---T----------TC-C-T
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            15668 11 +     36558 T-TAA---TC---T----------TC-C-T
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            11993 11 +     60246 T-TAA---TC---T----------TC-C-T
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                15476 11 +    109717 T-TAA---TC---T----------TC-C-T
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 3461 11 -     19505 T-TAA---TC---T----------TC-C-T
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                20134 11 +     27497 T-TAA---TC---T----------TC-C-T
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           22589 11 +     26808 T-TAA---TC---T----------TC-C-T
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                37324 11 +     46535 T-TAA---TC---T----------TC-C-T
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              20063 11 -     29447 T-TAA---TC---T----------TC-C-T
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.AANG03133801.1                                  559 12 -       736 T-TAG---TC---T----------TCCT-T
i Felis_catus.AANG03133801.1                            C 0 C 0
s Felis_catus_fca126.CM031420.1                         129285915 12 - 158578461 T-TAG---TC---T----------TCCT-T
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 27014 12 +     52776 T-TAG---TC---T----------TCCT-T
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13896141  8 -  19261668 T-TAA---GA---A----------T-----
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     215323 11 -    847004 G-TAA---TC---T----------TC-C-T
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           17684 11 -     43889 G-TAA---TC---T----------TC-C-T
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          14829 11 +     27357 G-TAA---TC---T----------TC-T-T
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               159571 12 +    324696 T-TAA---TC---T----------TCCT-T
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    186003  6 -    189561 T-TAA---TC--------------------
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 I 2
s Glis_glis.GliGli_scaffold_79770                           16468 12 -     18683 T-TCA---TC---T----------TGCT-T
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               9254  6 -     14630 T-TAA---TC--------------------
i Gorilla_beringei.k141_111300                          C 0 I 4
s Gorilla_gorilla.LT578340.1                            119656354  6 - 195582420 T-TAA---TC--------------------
i Gorilla_gorilla.LT578340.1                            C 0 I 4
s Graphiurus_murinus.GraMur_scaffold_4493                   79786 11 +    118900 T-TCA---TC---T----------TC-T-T
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         6055 11 +     10286 T-TAA---TC---T----------TC-C-T
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             4533 11 -     11661 T-TAA---TC---T----------TC-C-T
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             9860 11 +     56096 T-TAA---TC---T----------TC-C-T
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        33109 11 -     42470 T-TAA---TC---T----------TC-C-T
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        49732 11 -     54384 T-TAA---TC---T----------TC-C-T
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              22647 12 +     53719 T-TAG---TC---T----------TCCT-T
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                32874  6 -     91191 T-TAA---TC--------------------
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 I 2
s Heterocephalus_glaber.JH602058.1                        2560632  8 +  31725842 t-taa---ta---t----------t-----
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               62876  2 +     73687 -------------T----------T-----
i Heterohyrax_brucei.HetBruBak_scaffold_25354           I 3 I 1
s Hippopotamus_amphibius.HipAmp_scaffold_1308              150637 12 +    277961 T-TAA---TC---T----------TCCT-T
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      283035 12 -    477199 t-taA---TC---T----------TCCa-c
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959                805 12 +     26078 T-TAA---TC---T----------TCCT-C
i Hipposideros_galeritus.HipGal_scaffold_52959          I 7 I 15
s Hoolock_leuconedys.ctg649                                   108911 11 +    115816 T-TAA---TA---T----------TT-T-T
i Hoolock_leuconedys.ctg649                                I 116 I 1
s Hyaena_hyaena.HyaHya_flattened_line_20729                 23116 12 -     67322 T-TAG---TC---T----------TCCT-T
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           21247 18 -    119109 T-TAA---CA---TTTCTTTGATAT-----
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_1816750                             1740 11 +      3202 T-TAA---TA---T----------TT-T-T
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1633646                              1710 11 -      2102 T-TAA---TA---T----------TT-T-T
i Hylobates_agilis.k141_1633646                         C 0 C 0
s Hylobates_klossii.k141_468230                              3227 11 +      5464 T-TAA---TA---T----------TT-T-T
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14628575 10 -  25970782 T-TAA---T----T----------TT-T-T
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            1126 11 +      4161 T-TAA---TA---T----------TT-T-T
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             37436 11 -     60944 T-TAA---TA---T----------TT-T-T
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7130377 12 +  13083262 t-taa---ta---t----------tcct-t
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   1532 11 +      3484 T-TAA---TC---T----------TC-C-T
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              12846 12 +     17520 T-TAA---CC---T----------TCCT-T
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               27465 12 +     37189 T-TAA---CC---T----------TCCT-T
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          54023 11 -    147782 T-TAA---TC---T----------TT-T-T
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    5566 12 +     26176 T-TAA---TC---T----------TCCT-T
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258411407 11 - 285822530 T-TAA---TC---T----------TC-C-T
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        28722 11 +     39228 T-TAA---TC---T----------TC-C-T
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            58086 11 +     63517 T-TAA---TC---T----------TC-C-T
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        36466 11 -     38897 T-TAA---TC---T----------TC-C-T
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      2512 11 -     13103 T-TAA---TC---T----------TC-C-T
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3091450 12 -   3498232 t-tag---tt---t----------tcct-t
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    20873 12 +     22452 T-TAA---TC---T----------TCTT-T
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            139780 12 +   3060487 T-TAA---CC---T----------TCCT-T
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19252459 11 +  19376315 T-TCA---TC---T----------TT-T-T
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           15274 11 +     84689 G-TAA---TC---T----------TC-C-T
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3783013 11 +   6799190 G-TAA---TC---T----------TC-C-T
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20598800  8 -  62548349 T-TTA---TC---T----------T-----
i Loxodonta_africana.GL010040.1                         C 0 I 1
s Lycaon_pictus.CM007556.1                               11095204 11 +  39895028 T-TA----TC---T----------TCCT-T
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             24210 11 +     74745 T-TAA---TC---T----------TT-T-T
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12710671 11 +  12821369 T-TAA---TC---T----------TT-T-T
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                3244 11 -     26467 T-TAA---TC---T----------TT-T-T
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           51115 11 +     63263 T-TAA---TC---T----------TT-T-T
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 3225 11 -     26361 T-TAA---TC---T----------TT-T-T
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 6415 11 -      7381 T-TAA---TC---T----------TT-T-T
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  49644 11 -     79256 T-TAA---TC---T----------TT-T-T
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196039742 11 + 196197964 T-TAA---TC---T----------TT-T-T
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11449912 11 +  11645122 T-TAA---TC---T----------TT-T-T
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   8598 11 -     46448 T-TAA---TC---T----------TT-T-T
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                6261 11 -     13212 T-TAA---TC---T----------TT-T-T
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 19941 11 -     55006 T-TAA---TC---T----------TT-T-T
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43845056 11 +  43892939 T-TAA---TC---T----------TT-T-T
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               21225 11 -     24607 T-TAA---TC---T----------TT-T-T
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               8595 11 -     27140 T-TAA---TC---T----------TT-T-T
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43441631 11 -  43563597 T-TAA---TC---T----------TT-T-T
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4454435 11 -   4543643 T-TAA---TC---T----------TT-T-T
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36878249 12 +  64221397 t-taa---ta---t----------tcct-t
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       65601 12 -    234502 T-TAA---TG---T----------TCCT-C
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             6366 12 -     87323 T-TAG---TT---T----------TCCT-T
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 1272 12 +    115071 T-TGA---AC---A----------TACT-C
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1051545 12 -  26018355 T-TAA---AC---A----------TACT-C
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    2437 12 -     12939 T-TAA---CC---T----------TCCT-T
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16514465 11 +  47401472 T-TAA---TC---T----------TC-C-T
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  41499  6 -     48017 -------------T----------TCCT-C
i Microgale_talazaci.MicTal_scaffold_34660              I 3 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               24944 12 -     32043 T-TAA---TC---T----------TCCT-T
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22824623 12 -  98408828 T-TAA---AC---A----------TAGT-C
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8213003 12 +  10048721 G-TAA---TC---T----------TCCT-T
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            37492 12 +     45743 G-TAA---TC---T----------TCCT-T
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         6177 11 +     29742 T-TAA---TC---T----------TT-T-T
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        16946 12 -    104932 T-TAG---TC---T----------TCCT-T
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     5147 12 -     12809 T-TAA---TC---T----------TC-CTT
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 150227 12 +    154973 T-TAA---CC---T----------TCCT-T
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                163482 12 +    265003 T-TTA---TC---T----------TCCT-T
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  6223  6 -     19904 T-TAA---TC--------------------
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 I 2
s Mungos_mungo.MunMun_flattened_line_8729                  150322 12 -    168139 T-TAG---TC---T----------TCCT-T
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          24416 12 -    100666 T-TAA---TC---T----------TACT-T
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70771842 12 +  92629107 t-taa---at---a----------tacT-C
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75493896 12 +  98207768 T-TAA---AC---A----------TACT-C
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67560648 12 +  89017189 t-taa---ac---a----------tACT-C
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74336622 12 +  97876770 T-TAA---AT---A----------TGCT-C
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             14871 12 +     98495 T-TCA---CC---T----------TCCT-T
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4428205 12 -  28371801 T-TAG---TT---T----------TCCT-T
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     93848  9 -    117718 CTGGA---CA---G----------T-----
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               971288 12 +   8389877 T-TAA---TC---T----------TCCT-T
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5022709 12 +   6462685 T-TAA---TC---T----------TCCT-T
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3468792 12 -   3747815 T-TAA---TC---T----------TCCT-T
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        14033 12 +     66751 T-TAA---TC---T----------TCCT-T
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             7645 12 -      8794 G-TAA---TC---T----------TCCC-T
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            120374 12 +    362372 T-GAA---AC---T----------TTCT-T
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4490344 12 -  14209539 t-TAG---TC---T----------TCCT-T
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3954818 12 -   4490290 T-TAA---CC---T----------TCCT-T
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  50541 12 +     94413 T-TAA---TC---T----------TCCT-T
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_762468                             245 11 -      2755 T-TAA---TA---T----------TT-T-T
i Nomascus_annamensis.k141_762468                       C 0 C 0
s Nomascus_concolor.k141_70405                                865 11 +      1153 T-TAA---TA---T----------TT-T-T
i Nomascus_concolor.k141_70405                          C 0 C 0
s Nomascus_gabriellae.k141_1400361                            796 11 -      2203 T-TAA---TA---T----------TT-T-T
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_1022                             820 11 -     11638 T-TAA---TA---T----------TT-T-T
i Nomascus_siki_b.tarseq_1022                       C 0 C 0
s Nomascus_siki_a.k141_421408                                   710 11 +     16235 T-TAA---TA---T----------TT-T-T
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                38069 11 +   3668941 T-TA----TC---T----------TCCT-T
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65571949 11 -  95554990 g-taa---tc---t----------TC-C-T
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_771591                            15359 11 +     16181 g-taa---tc---t----------tc-c-t
i Nycticebus_coucang.k141_771591                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65680137 11 +  89412551 g-taa---tc---t----------tc-c-t
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Octodon_degus.JH651621.1                                3689307  9 +  10294119 tttga---ca---a----------t-----
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             685047 12 -   3126709 T-TAG---TC---T----------TCTT-T
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1083655  6 +   1425656 T-TAG---TC--------------------
i Odocoileus_virginianus.KZ101650.1                     C 0 I 2
s Okapia_johnstoni.LVCL01S0017931.1                         41737  6 +     78940 T-TAA---TC--------------------
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 I 2
s Ondatra_zibethicus.OndZib_scaffold_6821                  130419 12 +    145789 T-TAA---AC---A----------TAGT-C
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  43113 12 +     62360 T-TAA---TC---A----------TACT-C
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7228493 12 -   7562323 T-TAA---CC---T----------TCCT-T
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              64271  6 -     66828 -------------T----------TCCT-A
i Orycteropus_afer.OryAfe_flattened_line_13509          I 3 C 0
s Oryctolagus_cuniculus.CM000803.1                      141883888 12 + 163896628 T-taa---tc---t----------tctt-t
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      315207 11 -    505867 T-TA----TC---T----------TCCT-T
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        5185 11 -     53940 G-TAA---TC---T----------TC-T-T
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18013158 11 -  38779656 G-TAA---TC---T----------TC-T-T
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134082660  6 - 275406953 T-TAA---TC--------------------
i Ovis_aries.CM001582.2                                 C 0 I 2
s Ovis_canadensis.OviCan_scaffold_6251                      83894  6 +    140051 T-TAA---TC--------------------
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 I 2
s Pan_paniscus.CM003386.1                               127578533  6 - 205426864 T-TAA---TC--------------------
i Pan_paniscus.CM003386.1                               C 0 I 4
s Pan_troglodytes.KZ622857.1                               333322 11 +    772158 t-taa---tc---a----------tt-t-t
i Pan_troglodytes.KZ622857.1                            I 115 I 88
s Panthera_onca.PanOnc_flattened_line_1615                  39934 12 +    295523 T-TAG---TC---T----------TCCT-T
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3643749 12 +  18214204 T-TAG---TC---T----------TCCT-T
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5033397 12 -   6340057 T-TAG---TC---T----------TCCT-T
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1071536  6 -   1292953 T-TAG---TC--------------------
i Pantholops_hodgsonii.KE114631.1                       C 0 I 2
s Papio_anubis.CM001492.2                               188160420 11 - 188283584 T-TAA---TC---T----------TT-T-T
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              3510 11 +     25005 T-TAA---TC---T----------TT-T-T
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47517792 11 +  47705337 T-TAA---TC---T----------TT-T-T
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 71783 11 -    104429 T-TAA---TC---T----------TT-T-T
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   10315 11 +     14967 T-TAA---TC---T----------TT-T-T
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 6180 11 -      7628 T-TAA---TC---T----------TT-T-T
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    121421 12 -    135482 T-TAG---TC---T----------TCCT-T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          10850 11 -     23713 G-TAA---TC---T----------TC-C-T
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           11990 11 +     61070 G-TAA---TC---T----------TC-C-T
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       2268  8 +     49596 A-TCA---TC---T----------T-----
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4955477 12 -   8017169 T-TAA---AC---A----------TACT-C
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    17330  8 -     36578 T-TAA---TA---T----------T-----
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              2959 12 +      8220 T-TAA---CC---T----------TCCT-T
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            99579 12 +    112873 T-TAA---TA---T----------TCCT-T
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           9430 12 +     21690 T-TAA---CC---T----------TCCT-T
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       26115 11 +     44506 T-TAA---TC---T----------TC-T-T
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        26328 11 +     67491 T-TAA---TC---T----------TC-T-T
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      16567 11 -     98129 T-TAA---TC---T----------TC-T-T
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     26168 11 +    147771 T-TAA---TC---T----------TC-T-T
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         2803 11 -     43940 T-TAA---TC---T----------TC-T-T
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          6886 11 -     55515 T-TAA---TC---T----------TC-T-T
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         26240 11 +    152463 T-TAA---TC---T----------TT-T-T
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       4048 11 -    119457 T-TAA---TC---T----------TT-T-T
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         15963 11 +    134592 T-TAA---CC---T----------TT-T-T
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          26550 11 -     75465 T-TAA---TC---T----------TT-T-T
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              191163 11 -    373494 T-TAA---TC---T----------TT-T-T
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19811810 11 +  19899266 T-TAA---TC---T----------TT-T-T
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                3981  2 -      9567 -------------T----------T-----
i Procavia_capensis.ProCapCap_scaffold_149274           I 3 I 1
s Prolemur_simus.MPIZ01000048.1                           6852781 11 +  12164890 T-TAA---TC---T----------TC-C-T
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coronatus.k141_1353159                         7867 11 +     11805 T-TAA---TC---T----------TC-C-T
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           47202 11 +     52369 T-TAA---TC---T----------TC-C-T
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         39589 11 -     44753 T-TAA---TC---T----------TC-T-T
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            21512 11 +     27322 T-TAA---TC---T----------TC-C-T
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       21160 11 -     53241 T-TAA---TC---T----------TC-C-T
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         43423 11 -     48185 T-TAA---TC---T----------TC-C-T
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           38267 12 +     77221 T-TGA---AC---A----------TACT-C
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            6126 12 -     27784 T-TAA---TC---T----------TCCT-T
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        250334 12 -    344369 T-TAG---TT---T----------TCCT-T
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Puma_concolor.QAVW01000427.1                          131540045 12 - 161321710 T-TAG---TC---T----------TCCT-T
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                20519  6 +     68503 T-TAA---TC--------------------
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 I 2
s Rattus_norvegicus.chr11                                13917678 12 +  90463843 t-taa---aa---g----------tact-c
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1792637 12 +   2252614 t-TAA---TA---T----------TCCT-C
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                       929  6 -      4338 T-TAA---TA--------------------
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 I 2
s Saimiri_boliviensis.NW_024100938.1                     15676571 11 -  43202129 T-TAA---TC---T----------TT-T-T
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        8484 11 +     34089 T-TAA---TC---T----------TT-T-T
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              8424 11 -     60842 T-TAA---TC---T----------TT-T-T
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              8518 11 +     67014 T-TAA---TC---T----------TT-T-T
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              8495 11 +     60816 T-TAA---TC---T----------TT-T-T
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 8432 11 -     76454 T-TAA---TC---T----------TT-T-T
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17345219 10 -  30362882 T-TAA---G----G----------TT-T-T
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         24540 10 -     62485 T-TAA---G----G----------TT-T-T
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   39656 12 -    114521 T-TAA---TC---T----------CCCT-T
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  105047 12 -    120886 T-TAA---AC---A----------TACT-C
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            23581 12 +    739146 T-TAA---TC---T----------TCCT-T
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17770037  9 -  27805282 t-c------t---t----------tttt-t
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2244081 12 +   2842873 t-taa---ta---t----------tcct-t
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             238848 12 -    276980 T-TCG---TT---T----------TCCT-T
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            33239 12 +     62062 T-TAG---TC---T----------TCCT-T
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189275021 12 + 218635234 T-TCA---TC---T----------TCCT-T
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        18833 11 -  13920577 T-TAA---TA---T----------TT-T-T
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                2353 12 +     20549 T-TAA---TC---T----------TCCT-T
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               17318 12 +     45698 G-TAA---TC---T----------TCCC-T
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      810817 12 +   1148477 T-TAA---TC---T----------TCCT-T
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  61459 12 +     99546 T-TAA---TC---T----------TCCT-T
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194011953 11 - 194193292 T-TAA---TC---T----------TT-T-T
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                   428 12 -      3104 T-TAA---TC---T----------TCCT-T
i Tolypeutes_matacus.TolMat_scaffold_475685             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  138120 12 -    259118 T-TAA---TG---T----------TCCT-T
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trichechus_manatus.JH594618.1                          16089876 11 +  31416278 T-TCA---TCTTCT----------T-----
i Trichechus_manatus.JH594618.1                         C 0 I 1
s Tupaia_chinensis.KB320831.1                             2797787  9 -   3938065 G-TAA---TC---T----------TA----
i Tupaia_chinensis.KB320831.1                           C 0 I 2
s Tupaia_tana.TupTan_flattened_line_68454                    9722  9 +     13056 G-TAA---TC---T----------TA----
i Tupaia_tana.TupTan_flattened_line_68454               C 0 I 2
s Tursiops_truncatus.MRVK01000923.1                      69317222 12 -  96451834 T-TAA---CC---T----------TCCT-T
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                     123 12 +    136657 T-TAG---CC---T----------TCCT-T
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 C 0
s Ursus_maritimus.KK498671.1                              6520750 12 +  28682327 T-TAG---TC---T----------TCCT-T
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  9424 11 -     20643 T-TAA---TC---T----------GC-C-T
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             28959 11 -     33872 T-TAA---TC---T----------GC-C-T
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1528261 12 -   2331223 t-taa---tc---t----------tatt-t
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                144434 11 -    281493 T-TA----TC---T----------TCCT-T
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       131576 12 -    134049 T-TAA---CC---T----------TCCT-T
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        219903 12 -    227762 T-TAG---TC---T----------TCTT-T
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            1969 12 -     13665 T-TAA---CC---T----------TCCT-T
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Ochotona_princeps.JH802095.1                            4999348 675 -  23139505 I
e Tragulus_javanicus.TraJav_scaffold_14717                   9488 743 +     90398 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Manis_pentadactyla.KN017078.1                             39794  0 +     58827 C
e Manis_javanica.JSZB01003966.1                            152204  0 +    252755 C
e Equus_przewalskii.ATBW01073585.1                          16581  0 +     92910 C
e Equus_caballus.CM000402.2                              13355091  0 +  41866177 C
e Equus_asinus.JREZ01000062.1                             5856591  0 -   7175178 C
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Echinops_telfairi.JH980316.1                           22999931  2 -  44670279 I
e Zapus_hudsonius.ZapHud_scaffold_256618                      408  0 -      2259 C
e Jaculus_jaculus.JH725517.1                              8577673  0 +  11848649 C
e Allactaga_bullata.AllBul_scaffold_141108                    666  0 -      7259 C
e Trachypithecus_pileatus.k141_1022309                       5226  0 +     13828 C
e Trachypithecus_phayrei.ctg3                            44662914  0 -  44834318 C
e Trachypithecus_obscurus.k141_1115109                       8130  0 -     28054 C
e Trachypithecus_melamera.k141_699241                        2986  0 -     24393 C
e Trachypithecus_leucocephalus.k141_381681                   3005  0 +     12481 C
e Trachypithecus_laotum.k141_760702                          4719  0 +     14371 C
e Trachypithecus_hatinhensis.k141_504423                     6067  0 -     15592 C
e Trachypithecus_germaini.k141_868450                        3883  0 -     11566 C
e Trachypithecus_geei.k141_670367                           46082  0 -     54611 C
e Trachypithecus_francoisi.k141_768164                       4689  0 -     14244 C
e Trachypithecus_cristatus.k141_1011511                      5261  0 -     12939 C
e Trachypithecus_crepusculus.k141_1588528                   23360  0 -     32910 C
e Trachypithecus_auratus.k141_738098                        29800  0 +     38948 C
e Tarsius_wallacei.k141_48636                               64696  0 +     65473 C
e Tarsius_lariang.k141_609102                               31387  0 +     42269 C
e Semnopithecus_vetulus.k141_1143185                        16479  0 +     30600 C
e Semnopithecus_schistaceus.k141_387461                     33457  0 +     42640 C
e Semnopithecus_priam.k141_410937                           40312  0 +     46263 C
e Semnopithecus_johnii.k141_785014                         121532  0 +    130994 C
e Semnopithecus_hypoleucos.k141_761524                      11528  0 +     20762 C
e Semnopithecus_entellus.k141_1572367                        6153  0 +     15331 C
e Rhinopithecus_strykeri.ctg4                            44859307  0 -  45163003 C
e Rhinopithecus_bieti.k119_554384                            2917  0 -     17045 C
e Pygathrix_nigripes_a.k141_101123                             8537  0 +     18040 C
e Pygathrix_nigripes_b.ctg79                                 6809148  0 +   6970761 C
e Pygathrix_cinerea.k141_374971                             32651  0 +     56732 C
e Propithecus_coquerelli.NW_012147863.1                     21633  0 -     30946 C
e Presbytis_mitrata.k141_860013                              8661  0 +     14865 C
e Presbytis_comata.k141_672698                               8546  0 -     15069 C
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000036.1               26743271  0 +  26888534 C
e Piliocolobus_kirkii.k141_929665                            4788  0 +      7694 C
e Piliocolobus_gordonorum.k141_1270531                       5421  0 -     17985 C
e Piliocolobus_badius.k141_1987485                           4802  0 -      5908 C
e Nasalis_larvatus.k141_153429                              11264  0 +     48152 C
e Hystrix_cristata.HysCri_scaffold_50788                     7688 1865 +     22540 I
e Colobus_polykomos.k141_1406057                            19335  0 +     23629 C
e Colobus_guereza.LG08                                  147667351  0 + 156195979 C
e Colobus_angolensis.KN985967.1                          10889423  0 +  10971483 C
e Cercopithecus_roloway.k141_2263608                        25617 15 +     37128 I
e Cephalopachus_bancanus.k141_702587                        12545  0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530  0 +    345090 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               17567 1 +    209709 T
s Acinonyx_jubatus.LLWD01000356.1                         2039532 1 +   3721120 T
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    117792 1 -    189883 T
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10663489 1 +  23371972 T
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7100024 1 -  16596857 T
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   5440 1 -     60446 T
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         6157 1 -     29318 T
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         5095 1 +     38766 T
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          6051 1 -     80423 T
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              1024 1 +     19852 T
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                3279 1 -     12443 T
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                              578 1 +      5070 T
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                  323 1 -      1641 T
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          3062 1 -     24210 T
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           29644 1 -     30219 T
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_405616                              5480 1 +     16794 T
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                             612 1 -      1470 T
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             4757 1 -      9835 T
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3525535 1 +   4113121 T
i Ammotragus_lervia.NIVO01013474.1                      I 2 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      392575 1 -    631301 T
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             2966 1 +     55446 T
i Antilocapra_americana.AntAmePen_scaffold_27338        I 2 C 0
s Aotus_azarae.k141_3170768                                 66370 1 +     78111 T
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            9316 1 +     22701 T
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5753274 1 +   9889416 t
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             9872 1 -    104377 T
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               9879 1 +     23246 T
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     2411 1 +     11424 T
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        6487 1 +      9265 T
i Arctocebus_calabarensis.k141_587554                   C 0 I 1
s Artibeus_jamaicensis.ArtJam_scaffold_41619                11000 1 -     29036 T
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9543166 1 +  39197703 T
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             64439 1 +     85812 T
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                15452 1 +     89302 T
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             19953 1 -     58268 T
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             67947 1 +    119057 T
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               9916 1 -     25888 T
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                10971 1 -     16375 T
i Avahi_laniger.k141_2840928                            C 0 I 1
s Avahi_peyrierasi.k141_798820                               4587 1 +      6337 T
i Avahi_peyrierasi.k141_798820                          C 0 I 1
s Balaenoptera_acutorostrata.KI537095.1                  26384023 1 +  51448160 T
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        9196 1 -     13118 T
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   47997 1 -     72089 T
i Beatragus_hunteri.BeaHun_scaffold_21644               I 2 C 0
s Bison_bison.KN264915.1                                   302141 1 -   6870073 T
i Bison_bison.KN264915.1                                I 2 C 0
s Bos_indicus.CM003021.1                                 22956239 1 + 161108492 T
i Bos_indicus.CM003021.1                                I 2 C 0
s Bos_mutus.JH883513.1                                     418504 1 +    998990 T
i Bos_mutus.JH883513.1                                  I 2 C 0
s Bos_taurus.CM000177.6                                  22664893 1 + 158972876 T
i Bos_taurus.CM000177.6                                 I 2 C 0
s Bubalus_bubalis.KI419065.1                               674657 1 +   1914593 T
i Bubalus_bubalis.KI419065.1                            I 2 C 0
s Cacajao_ayresi.k141_724503                               117819 1 -    171031 T
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 16839 1 +    125063 T
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                18886 1 -    216513 T
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       11429 1 -    134917 T
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3223165 1 -   8989139 t
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           400866 1 -  15254737 t
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2976603 1 +   6889770 t
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11526365 1 +  39901454 T
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   21339 1 +     87036 T
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11273048 1 -  35597290 T
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11095759 1 +  39895921 T
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16462544 1 -  44759192 T
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21333477 1 + 157394656 T
i Capra_aegagrus.CM003214.1                             I 2 C 0
s Capra_hircus.CM004562.1                               135711832 1 - 157403528 T
i Capra_hircus.CM004562.1                               I 2 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               61993 1 +     67245 C
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_218148                    852 1 -      1057 T
i Castor_canadensis.CasCan_scaffold_218148              C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   162679 1 -    276539 T
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18894647 1 -  29618158 T
i Cebus_albifrons.Contig22                              T 895 I 894
s Cebus_olivaceus.k141_93739                                12191 1 -     26817 T
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                16435 1 +     25043 T
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4367598 1 +   7569818 T
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         7355 1 -      9338 T
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6559381 1 +   6739814 T
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      30858 1 +     60454 T
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          6062 1 -     21101 T
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         63372 1 -    107033 T
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        6235 1 -     17608 T
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          3400 1 +     45019 T
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           3460 1 +     15177 T
i Cercopithecus_diana.k141_2561715                      C 0 I 216
s Cercopithecus_hamlyni.k141_129805                          6282 1 +     16677 T
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           28472 1 +     35983 T
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11995003 1 +  12117833 T
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46481979 1 +  46592721 T
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                         96 1 -     27215 T
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       6296 1 +     35577 T
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        6090 1 -     25661 T
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        6262 1 -     17744 T
i Cercopithecus_pogonias.k141_3109732                   I 215 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           4603 1 -      6963 T
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           63196 1 -     68416 T
i Cheirogaleus_major.k141_1157592                       C 0 I 1
s Cheirogaleus_medius.k141_133808                           12302 1 +     13308 T
i Cheirogaleus_medius.k141_133808                       C 0 I 1
s Cheracebus_lucifer.k141_619653                             9477 1 -     18223 T
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              1215 1 +    188999 T
i Cheracebus_lugens.k141_996499                         I 4 C 0
s Cheracebus_regulus.k141_2128895                           45514 1 +     57117 T
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          50194 1 +     54541 T
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chiropotes_israelita.k141_1189915                         74998 1 +    196370 T
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          19179 1 +     40510 T
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15143816 1 -  15256731 T
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      38280 1 -     53260 T
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101148839 1 + 101219884 T
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                18708 1 -     21363 T
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           764012 1 +    964067 T
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_629495              2281 1 -      3120 T
i Chrysochloris_asiatica.ChrAsi_scaffold_629495         C 0 C 0
s Condylura_cristata.JH655880.1                          60622215 1 +  78930452 T
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         2183 1 -      5782 T
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 282667 1 -    399297 T
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53035038 1 +  72327488 T
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              1627 1 -     22648 T
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            57518 1 -     70449 T
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  214288 1 -    956709 T
i Ctenodactylus_gundi.CteGun_scaffold_447               I 4 C 0
s Dasypus_novemcinctus.JH568778.1                          185681 1 -   6883506 T
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16849131 1 +  31942871 T
i Daubentonia_madagascariensis.ctg11                    C 0 I 1
s Delphinapterus_leucas.KZ290064.1                       80040646 1 -  96802777 T
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18701209 1 -  18957592 T
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 326245 1 +    993696 T
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   6886 1 +    151128 T
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dipodomys_ordii.KN672545.1                              3660359 1 +   4240102 t
i Dipodomys_ordii.KN672545.1                            I 159 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  2713 1 -     11986 T
i Dipodomys_stephensi.DipSte_scaffold_84338             I 165 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1496213 1 +   1727528 T
i Elaphurus_davidianus.JRFZ01086400.1                   I 2 C 0
s Elephantulus_edwardii.JH947210.1                        7833008 1 +  15467074 T
i Elephantulus_edwardii.JH947210.1                      C 0 I 1
s Ellobius_lutescens.LOEQ01003611.1                        243831 1 -    369425 T
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Enhydra_lutris.KZ291749.1                              85877486 1 +  99434291 T
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4708966 1 +   6522550 T
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11541334 1 +  16010500 t
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48780849 1 -  48907691 T
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          318866 1 +    330699 T
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             65323 1 +     89355 T
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              9284 1 +     13586 T
i Eulemur_albifrons.k141_715837                         C 0 I 1
s Eulemur_collaris.k141_1015201                              2546 1 -      4292 T
i Eulemur_collaris.k141_1015201                         C 0 I 1
s Eulemur_coronatus.k141_3240342                            15679 1 +     36558 T
i Eulemur_coronatus.k141_3240342                        C 0 I 1
s Eulemur_flavifrons.k141_903901                            12004 1 +     60246 T
i Eulemur_flavifrons.k141_903901                        C 0 I 1
s Eulemur_fulvus.k141_653297                                15487 1 +    109717 T
i Eulemur_fulvus.k141_653297                            C 0 I 1
s Eulemur_macaco.k141_747087                                 3472 1 -     19505 T
i Eulemur_macaco.k141_747087                            C 0 I 1
s Eulemur_mongoz.k141_825972                                20145 1 +     27497 T
i Eulemur_mongoz.k141_825972                            C 0 I 1
s Eulemur_rubriventer.k141_411740                           22600 1 +     26808 T
i Eulemur_rubriventer.k141_411740                       C 0 I 1
s Eulemur_rufus.k141_1620292                                37335 1 +     46535 T
i Eulemur_rufus.k141_1620292                            C 0 I 1
s Eulemur_sanfordi.k141_186399                              20074 1 -     29447 T
i Eulemur_sanfordi.k141_186399                          C 0 I 1
s Felis_catus.AANG03133801.1                                  571 1 -       736 T
i Felis_catus.AANG03133801.1                            C 0 C 0
s Felis_catus_fca126.CM031420.1                         129285927 1 - 158578461 T
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 27026 1 +     52776 T
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Galago_moholi.ctg555                                     215334 1 -    847004 T
i Galago_moholi.ctg555                                  C 0 I 1
s Galago_senegalensis.k141_964197                           17695 1 -     43889 T
i Galago_senegalensis.k141_964197                       C 0 I 1
s Galagoides_demidoff.k141_1769638                          14840 1 +     27357 T
i Galagoides_demidoff.k141_1769638                      C 0 I 1
s Galeopterus_variegatus.GalVar_scaffold_354               159583 1 +    324696 T
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    186011 1 -    189561 T
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 2 C 0
s Glis_glis.GliGli_scaffold_79770                           16480 1 -     18683 T
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               9264 1 -     14630 T
i Gorilla_beringei.k141_111300                          I 4 C 0
s Gorilla_gorilla.LT578340.1                            119656364 1 - 195582420 T
i Gorilla_gorilla.LT578340.1                            I 4 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   79797 1 +    118900 T
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         6066 1 +     10286 T
i Hapalemur_alaotrensis.k141_1280836                    C 0 I 1
s Hapalemur_gilberti.k141_279011                             4544 1 -     11661 T
i Hapalemur_gilberti.k141_279011                        C 0 I 1
s Hapalemur_griseus.k141_1387522                             9871 1 +     56096 T
i Hapalemur_griseus.k141_1387522                        C 0 I 1
s Hapalemur_meridionalis.k141_186231                        33120 1 -     42470 T
i Hapalemur_meridionalis.k141_186231                    C 0 I 1
s Hapalemur_occidentalis.k141_797938                        49743 1 -     54384 T
i Hapalemur_occidentalis.k141_797938                    C 0 I 1
s Helogale_parvula.HelPar_flattened_line_22962              22659 1 +     53719 T
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                32882 1 -     91191 T
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 2 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               62879 1 +     73687 T
i Heterohyrax_brucei.HetBruBak_scaffold_25354           I 1 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              150649 1 +    277961 T
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      283047 1 -    477199 t
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_7653                5610 1 +     86108 T
i Hipposideros_galeritus.HipGal_scaffold_7653           I 12 C 0
s Hoolock_leuconedys.ctg315                                   350270 1 +    431944 T
i Hoolock_leuconedys.ctg315                                I 11 I 10
s Hyaena_hyaena.HyaHya_flattened_line_20729                 23128 1 -     67322 T
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hylobates_abbotti.k141_1816750                             1751 1 +      3202 T
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1633646                              1721 1 -      2102 T
i Hylobates_agilis.k141_1633646                         C 0 C 0
s Hylobates_klossii.k141_468230                              3238 1 +      5464 T
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14628585 1 -  25970782 T
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            1137 1 +      4161 T
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             37447 1 -     60944 T
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7130389 1 +  13083262 t
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   1543 1 +      3484 T
i Indri_indri.k141_2197838                              C 0 I 1
s Inia_geoffrensis.IniGeo_flattened_line_66725              12858 1 +     17520 T
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               27477 1 +     37189 T
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          54034 1 -    147782 T
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    5578 1 +     26176 T
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258411418 1 - 285822530 T
i Lemur_catta.scaffold_1                                C 0 I 1
s Lepilemur_ankaranensis.k141_884009                        28733 1 +     39228 T
i Lepilemur_ankaranensis.k141_884009                    C 0 I 1
s Lepilemur_dorsalis.k141_134267                            58097 1 +     63517 T
i Lepilemur_dorsalis.k141_134267                        C 0 I 1
s Lepilemur_ruficaudatus.k141_574529                        36477 1 -     38897 T
i Lepilemur_ruficaudatus.k141_574529                    C 0 I 1
s Lepilemur_septentrionalis.k141_710646                      2523 1 -     13103 T
i Lepilemur_septentrionalis.k141_710646                 C 0 I 1
s Leptonychotes_weddellii.KB714749.1                      3091462 1 -   3498232 t
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    20885 1 +     22452 T
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            139792 1 +   3060487 T
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19252470 1 +  19376315 T
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           15285 1 +     84689 T
i Loris_lydekkerianus.k141_550999                       C 0 I 1
s Loris_tardigradus.ctg97                                 3783024 1 +   6799190 T
i Loris_tardigradus.ctg97                               C 0 I 1
s Loxodonta_africana.GL010040.1                          20598809 1 -  62548349 T
i Loxodonta_africana.GL010040.1                         I 1 C 0
s Lycaon_pictus.CM007556.1                               11095215 1 +  39895028 T
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             24221 1 +     74745 T
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12710682 1 +  12821369 T
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                3255 1 -     26467 T
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           51126 1 +     63263 T
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 3236 1 -     26361 T
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 6426 1 -      7381 T
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  49655 1 -     79256 T
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196039753 1 + 196197964 T
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11449923 1 +  11645122 T
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   8609 1 -     46448 T
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                6272 1 -     13212 T
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 19952 1 -     55006 T
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43845067 1 +  43892939 T
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               21236 1 -     24607 T
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               8606 1 -     27140 T
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43441642 1 -  43563597 T
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4454446 1 -   4543643 T
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36878261 1 +  64221397 t
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       65613 1 -    234502 T
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             6378 1 -     87323 T
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 1284 1 +    115071 T
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1051557 1 -  26018355 T
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    2449 1 -     12939 T
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16514476 1 +  47401472 T
i Microcebus_murinus.CM007691.1                         C 0 I 1
s Microgale_talazaci.MicTal_scaffold_34660                  41505 1 -     48017 T
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               24956 1 -     32043 T
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22824635 1 -  98408828 T
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8213015 1 +  10048721 T
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            37504 1 +     45743 T
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         6188 1 +     29742 T
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        16958 1 -    104932 T
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     5159 1 -     12809 T
i Mirza_zaza.k141_593947                                C 0 I 1
s Monodon_monoceros.MonMon_M_scaffold_5598                 150239 1 +    154973 T
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                163494 1 +    265003 T
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  6231 1 -     19904 T
i Moschus_moschiferus.MosMos_scaffold_78805             I 2 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  150334 1 -    168139 T
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          24428 1 -    100666 T
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70771854 1 +  92629107 C
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75493908 1 +  98207768 T
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67560660 1 +  89017189 T
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74336634 1 +  97876770 T
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             14883 1 +     98495 T
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4428217 1 -  28371801 T
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myotis_brandtii.KE161952.1                               971300 1 +   8389877 T
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5022721 1 +   6462685 T
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3468804 1 -   3747815 T
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        14045 1 +     66751 T
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             7657 1 -      8794 T
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            120386 1 +    362372 T
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4490356 1 -  14209539 T
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3954830 1 -   4490290 T
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  50553 1 +     94413 T
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_762468                             256 1 -      2755 T
i Nomascus_annamensis.k141_762468                       C 0 I 10
s Nomascus_concolor.k141_70405                                876 1 +      1153 T
i Nomascus_concolor.k141_70405                          C 0 C 0
s Nomascus_gabriellae.k141_1400361                            807 1 -      2203 T
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_1022                             831 1 -     11638 T
i Nomascus_siki_b.tarseq_1022                       C 0 I 846
s Nomascus_siki_a.k141_421408                                   721 1 +     16235 T
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                38080 1 +   3668941 T
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65571960 1 -  95554990 T
i Nycticebus_bengalensis.LG16                           C 0 I 1
s Nycticebus_coucang.k141_771591                            15370 1 +     16181 t
i Nycticebus_coucang.k141_771591                        C 0 I 1
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65680148 1 +  89412551 t
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 I 1
s Odobenus_rosmarus.KB229369.1                             685059 1 -   3126709 T
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1083663 1 +   1425656 T
i Odocoileus_virginianus.KZ101650.1                     I 2 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         41745 1 +     78940 T
i Okapia_johnstoni.LVCL01S0017931.1                     I 2 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  130431 1 +    145789 T
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  43125 1 +     62360 T
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7228505 1 -   7562323 T
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              64277 1 -     66828 T
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141883900 1 + 163896628 t
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      315218 1 -    505867 T
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        5196 1 -     53940 T
i Otolemur_crassicaudatus.k141_505435                   C 0 I 1
s Otolemur_garnettii.GL873528.1                          18013169 1 -  38779656 T
i Otolemur_garnettii.GL873528.1                         C 0 I 1
s Ovis_aries.CM001582.2                                 134082668 1 - 275406953 T
i Ovis_aries.CM001582.2                                 I 2 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      83902 1 +    140051 T
i Ovis_canadensis.OviCan_scaffold_6251                  I 2 C 0
s Pan_paniscus.CM003386.1                               127578543 1 - 205426864 T
i Pan_paniscus.CM003386.1                               I 4 C 0
s Pan_troglodytes.CM009241.2                            120155703 1 - 196562556 T
i Pan_troglodytes.CM009241.2                            I 10 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  39946 1 +    295523 T
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3643761 1 +  18214204 T
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5033409 1 -   6340057 T
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1071544 1 -   1292953 T
i Pantholops_hodgsonii.KE114631.1                       I 2 C 0
s Papio_anubis.CM001492.2                               188160431 1 - 188283584 T
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              3521 1 +     25005 T
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47517803 1 +  47705337 T
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 71794 1 -    104429 T
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   10326 1 +     14967 T
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 6191 1 -      7628 T
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    121433 1 -    135482 T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          10861 1 -     23713 T
i Perodicticus_ibeanus.k141_117958                      C 0 I 1
s Perodicticus_potto.k141_1136815                           12001 1 +     61070 T
i Perodicticus_potto.k141_1136815                       C 0 I 1
s Perognathus_longimembris.PerPac_flattened_line_19359       2276 1 +     49596 T
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4955489 1 -   8017169 T
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              2971 1 +      8220 T
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            99591 1 +    112873 T
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           9442 1 +     21690 T
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       26126 1 +     44506 T
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        26339 1 +     67491 T
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      16578 1 -     98129 T
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     26179 1 +    147771 T
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         2814 1 -     43940 T
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          6897 1 -     55515 T
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         26251 1 +    152463 T
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       4059 1 -    119457 T
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         15974 1 +    134592 T
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          26561 1 -     75465 T
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              191174 1 -    373494 T
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19811821 1 +  19899266 T
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                3984 1 -      9567 T
i Procavia_capensis.ProCapCap_scaffold_149274           I 1 C 0
s Prolemur_simus.MPIZ01000048.1                           6852792 1 +  12164890 T
i Prolemur_simus.MPIZ01000048.1                         C 0 I 1
s Propithecus_coronatus.k141_1353159                         7878 1 +     11805 T
i Propithecus_coronatus.k141_1353159                    C 0 I 1
s Propithecus_diadema.k141_577245                           47213 1 +     52369 T
i Propithecus_diadema.k141_577245                       C 0 I 1
s Propithecus_edwardsi.k141_1317105                         39600 1 -     44753 T
i Propithecus_edwardsi.k141_1317105                     C 0 I 1
s Propithecus_perrieri.k141_7554                            21523 1 +     27322 T
i Propithecus_perrieri.k141_7554                        C 0 I 1
s Propithecus_tattersalli.k141_907138                       21171 1 -     53241 T
i Propithecus_tattersalli.k141_907138                   C 0 I 1
s Propithecus_verreauxi.k141_158021                         43434 1 -     48185 T
i Propithecus_verreauxi.k141_158021                     C 0 I 1
s Psammomys_obesus.NESX01026517.1                           38279 1 +     77221 T
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            6138 1 -     27784 T
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        250346 1 -    344369 T
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Puma_concolor.QAVW01000427.1                          131540057 1 - 161321710 T
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                20527 1 +     68503 T
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 2 C 0
s Rattus_norvegicus.chr11                                13917690 1 +  90463843 t
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1792649 1 +   2252614 T
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                       937 1 -      4338 T
i Saiga_tatarica.SaiTat_scaffold_371890                 I 2 C 0
s Saimiri_boliviensis.NW_024100938.1                     15676582 1 -  43202129 T
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        8495 1 +     34089 T
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              8435 1 -     60842 T
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              8529 1 +     67014 T
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              8506 1 +     60816 T
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 8443 1 -     76454 T
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17345229 1 -  30362882 T
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         24550 1 -     62485 T
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   39668 1 -    114521 T
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  105059 1 -    120886 T
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            23593 1 +    739146 T
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17770046 1 -  27805282 t
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2244093 1 +   2842873 t
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             238860 1 -    276980 T
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            33251 1 +     62062 T
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189275033 1 + 218635234 T
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        18844 1 -  13920577 T
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                2365 1 +     20549 T
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               17330 1 +     45698 T
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      810829 1 +   1148477 T
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  61471 1 +     99546 T
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194011964 1 - 194193292 T
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                   440 1 -      3104 T
i Tolypeutes_matacus.TolMat_scaffold_475685             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  138132 1 -    259118 T
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trichechus_manatus.JH594618.1                          16089888 1 +  31416278 T
i Trichechus_manatus.JH594618.1                         I 1 C 0
s Tupaia_chinensis.KB320831.1                             2797798 1 -   3938065 T
i Tupaia_chinensis.KB320831.1                           I 2 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    9733 1 +     13056 T
i Tupaia_tana.TupTan_flattened_line_68454               I 2 C 0
s Tursiops_truncatus.MRVK01000923.1                      69317234 1 -  96451834 T
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                     135 1 +    136657 T
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 C 0
s Ursus_maritimus.KK498671.1                              6520762 1 +  28682327 T
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  9435 1 -     20643 T
i Varecia_rubra.k141_432109                             C 0 I 1
s Varecia_variegata.k141_775891                             28970 1 -     33872 T
i Varecia_variegata.k141_775891                         C 0 I 1
s Vicugna_pacos.KN269600.1                                1528273 1 -   2331223 t
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                144445 1 -    281493 T
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       131588 1 -    134049 T
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        219915 1 -    227762 T
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            1981 1 -     13665 T
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Petromus_typicus.PetTyp_scaffold_33007                    17338 0 -     36578 C
e Dinomys_branickii.DinBra_scaffold_1996                   159648 0 +    228994 C
e Ochotona_princeps.JH802095.1                            4999348 675 -  23139505 I
e Tragulus_javanicus.TraJav_scaffold_14717                   9488 743 +     90398 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Manis_pentadactyla.KN017078.1                             39794 0 +     58827 C
e Manis_javanica.JSZB01003966.1                            152204 0 +    252755 C
e Equus_przewalskii.ATBW01073585.1                          16581 0 +     92910 C
e Equus_caballus.CM000402.2                              13355091 0 +  41866177 C
e Equus_asinus.JREZ01000062.1                             5856591 0 -   7175178 C
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Echinops_telfairi.JH980316.1                           22999931 2 -  44670279 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           21265 0 -    119109 C
e Zapus_hudsonius.ZapHud_scaffold_256618                      408 0 -      2259 C
e Jaculus_jaculus.JH725517.1                              8577673 0 +  11848649 C
e Allactaga_bullata.AllBul_scaffold_141108                    666 0 -      7259 C
e Trachypithecus_pileatus.k141_1022309                       5226 0 +     13828 C
e Trachypithecus_phayrei.ctg3                            44662914 0 -  44834318 C
e Trachypithecus_obscurus.k141_1115109                       8130 0 -     28054 C
e Trachypithecus_melamera.k141_699241                        2986 0 -     24393 C
e Trachypithecus_leucocephalus.k141_381681                   3005 0 +     12481 C
e Trachypithecus_laotum.k141_760702                          4719 0 +     14371 C
e Trachypithecus_hatinhensis.k141_504423                     6067 0 -     15592 C
e Trachypithecus_germaini.k141_868450                        3883 0 -     11566 C
e Trachypithecus_geei.k141_670367                           46082 0 -     54611 C
e Trachypithecus_francoisi.k141_768164                       4689 0 -     14244 C
e Trachypithecus_cristatus.k141_1011511                      5261 0 -     12939 C
e Trachypithecus_crepusculus.k141_1588528                   23360 0 -     32910 C
e Trachypithecus_auratus.k141_738098                        29800 0 +     38948 C
e Tarsius_wallacei.k141_48636                               64696 0 +     65473 C
e Tarsius_lariang.k141_609102                               31387 0 +     42269 C
e Semnopithecus_vetulus.k141_1143185                        16479 0 +     30600 C
e Semnopithecus_schistaceus.k141_387461                     33457 0 +     42640 C
e Semnopithecus_priam.k141_410937                           40312 0 +     46263 C
e Semnopithecus_johnii.k141_785014                         121532 0 +    130994 C
e Semnopithecus_hypoleucos.k141_761524                      11528 0 +     20762 C
e Semnopithecus_entellus.k141_1572367                        6153 0 +     15331 C
e Rhinopithecus_strykeri.ctg4                            44859307 0 -  45163003 C
e Rhinopithecus_bieti.k119_554384                            2917 0 -     17045 C
e Pygathrix_nigripes_a.k141_101123                             8537 0 +     18040 C
e Pygathrix_nigripes_b.ctg79                                 6809148 0 +   6970761 C
e Pygathrix_cinerea.k141_374971                             32651 0 +     56732 C
e Propithecus_coquerelli.NW_012147863.1                     21633 0 -     30946 C
e Presbytis_mitrata.k141_860013                              8661 0 +     14865 C
e Presbytis_comata.k141_672698                               8546 0 -     15069 C
e Pithecia_vanzolinii.k141_831006                           15424 0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514 0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521 0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292 0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093 0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038 0 +     78826 C
e Pithecia_albicans.k141_991845                             45662 0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000036.1               26743271 0 +  26888534 C
e Piliocolobus_kirkii.k141_929665                            4788 0 +      7694 C
e Piliocolobus_gordonorum.k141_1270531                       5421 0 -     17985 C
e Piliocolobus_badius.k141_1987485                           4802 0 -      5908 C
e Octodon_degus.JH651621.1                                3689316 0 +  10294119 C
e Nasalis_larvatus.k141_153429                              11264 0 +     48152 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     93857 0 -    117718 C
e Hystrix_cristata.HysCri_scaffold_50788                     7688 1865 +     22540 I
e Heterocephalus_glaber.JH602058.1                        2560640 0 +  31725842 C
e Fukomys_damarensis.KN123630.1                          13896149 0 -  19261668 C
e Dolichotis_patagonum.DolPat_scaffold_14102                39980 0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             62013 0 -    236241 C
e Cuniculus_paca.CunPac_flattened_line_16637                20873 0 +     26546 C
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 34324 0 -     67205 C
e Colobus_polykomos.k141_1406057                            19335 0 +     23629 C
e Colobus_guereza.LG08                                  147667351 0 + 156195979 C
e Colobus_angolensis.KN985967.1                          10889423 0 +  10971483 C
e Chinchilla_lanigera.JH721867.1                         15964386 0 +  43084221 C
e Cercopithecus_roloway.k141_2263608                        25617 15 +     37128 I
e Cephalopachus_bancanus.k141_702587                        12545 0 +     21754 C
e Cavia_tschudii.CavTsc_scaffold_488                       179812 0 +    436027 C
e Cavia_porcellus.DS562889.1                             15801640 0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15789701 0 -  24422027 C
e Carlito_syrichta.NW_007248099.1                          313530 0 +    345090 C
e Capromys_pilorides.CapPil_scaffold_529800                   233 0 -      2320 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               17568 10 +    209709 AATGAT--CC-----------TG
s Acinonyx_jubatus.LLWD01000356.1                         2039533 10 +   3721120 GATAAT--TC-----------AG
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    117793 10 -    189883 GAAAAT--TG-----------TG
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10663490 10 +  23371972 GATAAT--TC-----------AG
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7100025 10 -  16596857 GCTAAT--TC-----------AG
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   5441 10 -     60446 AATGAT--CC-----------TG
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         6158 10 -     29318 AATGAT--CC-----------TG
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         5096 10 +     38766 AATGAT--CC-----------TG
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          6052 10 -     80423 AATGAT--CC-----------TG
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              1025 10 +     19852 AATGAT--TC-----------TG
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                3280 10 -     12443 AATGAT--TC-----------TG
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                              579 10 +      5070 AATGAT--TC-----------TG
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                  324 10 -      1641 AATGAT--TC-----------TG
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          3063 10 -     24210 AATGAT--TC-----------TG
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           29645 10 -     30219 AATGAT--TC-----------TG
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_405616                              5481 10 +     16794 AATGAT--TC-----------TG
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                             613 10 -      1470 AATGAT--TC-----------TG
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             4758 10 -      9835 AATGAT--TC-----------TG
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3525536 10 +   4113121 GACAAT--TC-----------AG
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      392576 10 -    631301 GATAAT--GC-----------AG
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             2967 10 +     55446 GACAAT--TC-----------CG
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 66371 10 +     78111 AATGAT--TC-----------TG
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            9317 10 +     22701 AATGAT--TC-----------TG
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5753275 10 +   9889416 aatgat--tc-----------tg
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             9873 10 -    104377 AATGAT--TC-----------TG
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               9880 10 +     23246 AATGAT--TC-----------TG
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     2412 10 +     11424 CTTAAT--TC-----------TG
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        6489 10 +      9265 GATAAT--TC-----------TG
i Arctocebus_calabarensis.k141_587554                   I 1 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                11001 10 -     29036 GATAAT--GC-----------AG
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9543167 10 +  39197703 AATGAT--TC-----------TG
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             64440 10 +     85812 AATGAT--TC-----------TG
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                15453 10 +     89302 AATGAT--TC-----------TG
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             19954 10 -     58268 AATGAT--TC-----------TG
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             67948 10 +    119057 AATGAT--TC-----------TG
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               9917 10 -     25888 AATGAT--TC-----------TG
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                10973 10 -     16375 GATAAT--TC-----------TG
i Avahi_laniger.k141_2840928                            I 1 C 0
s Avahi_peyrierasi.k141_798820                               4589 10 +      6337 GATAAT--TC-----------TG
i Avahi_peyrierasi.k141_798820                          I 1 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26384024 10 +  51448160 GATAAT--TC-----------AG
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        9197 10 -     13118 GATAAT--TC-----------AG
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   47998 10 -     72089 GACAAT--TC-----------AG
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   302142 10 -   6870073 GACAAT--TC-----------AG
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22956240 10 + 161108492 GACAAT--TC-----------AG
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     418505 10 +    998990 GACAAT--TC-----------AG
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22664894 10 + 158972876 GACAAT--TC-----------AG
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               674658 10 +   1914593 GACAAT--TC-----------AG
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               117820 10 -    171031 AATGAT--TC-----------TG
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 16840 10 +    125063 AATGAT--TC-----------TG
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                18887 10 -    216513 AATGAT--TC-----------TG
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       11430 10 -    134917 AATGAT--TC-----------TG
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3223166 10 -   8989139 gatAAT--TC-----------TC
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           400867 10 -  15254737 gatAAT--TC-----------TC
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2976604 10 +   6889770 gatAAT--TC-----------TC
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11526366 10 +  39901454 GGTAAT--TC-----------AG
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   21340 10 +     87036 GGTAAT--TC-----------AG
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11273049 10 -  35597290 GGTAAT--TC-----------AG
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11095760 10 +  39895921 GGTAAT--TC-----------AG
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16462545 10 -  44759192 GGTAAT--TC-----------AG
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21333478 10 + 157394656 GACAAT--TC-----------AG
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135711833 10 - 157403528 GACAAT--TC-----------AG
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_529800                   233  4 -      2320 --------TC-----------TT
i Capromys_pilorides.CapPil_scaffold_529800             C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               61994 10 +     67245 GATAAT--GC-----------AG
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_218148                    853 10 -      1057 GATAAT--TC-----------TG
i Castor_canadensis.CasCan_scaffold_218148              C 0 n 0
s Catagonus_wagneri.CatWag_scaffold_1305                   162680 10 -    276539 GATAAT--CC-----------AG
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15789701  4 -  24422027 --------TC-----------TG
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15801640  4 -  24440124 --------TC-----------TG
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       179812  4 +    436027 --------TC-----------TG
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18895542 10 -  29618158 AATGAT--TC-----------TG
i Cebus_albifrons.Contig22                              I 894 C 0
s Cebus_olivaceus.k141_93739                                12192 10 -     26817 AATGAT--TC-----------TG
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                16436 10 +     25043 AATGAT--TC-----------TG
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4367599 10 +   7569818 GATAAT--CC-----------AG
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         7356 10 -      9338 GATAAT--CC-----------AG
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6559382 10 +   6739814 AATGAT--CC-----------TG
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      30859 10 +     60454 AATGAT--CC-----------TG
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          6063 10 -     21101 AATGAT--CC-----------TG
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         63373 10 -    107033 AATGAT--CC-----------TG
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        6236 10 -     17608 AATGAT--CC-----------TG
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          3401 10 +     45019 AATGAT--CC-----------TG
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           3677 10 +     15177 AATGAT--CC-----------TG
i Cercopithecus_diana.k141_2561715                      I 216 C 0
s Cercopithecus_hamlyni.k141_129805                          6283 10 +     16677 AATGAT--CC-----------TG
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           28473 10 +     35983 AATGAT--CC-----------TG
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11995004 10 +  12117833 AATGAT--CC-----------TG
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46481980 10 +  46592721 AATGAT--CC-----------TG
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                         97 10 -     27215 AATGAT--CC-----------TG
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       6297 10 +     35577 AATGAT--CC-----------TG
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        6091 10 -     25661 AATGAT--CC-----------TG
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        6263 10 -     17744 AATGAT--CC-----------TG
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        25632 10 +     37128 AATGAT--CC-----------TG
i Cercopithecus_roloway.k141_2263608                    I 15 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           4604 10 -      6963 GATAAT--TC-----------TG
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           63198 10 -     68416 GATAAT--TC-----------TG
i Cheirogaleus_major.k141_1157592                       I 1 C 0
s Cheirogaleus_medius.k141_133808                           12304 10 +     13308 GATAAT--TC-----------TG
i Cheirogaleus_medius.k141_133808                       I 1 C 0
s Cheracebus_lucifer.k141_619653                             9478 10 -     18223 AATGAT--TC-----------TG
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              1216 10 +    188999 AATGAT--TC-----------TG
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           45515 10 +     57117 AATGAT--TC-----------TG
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          50195 10 +     54541 AATGAT--TC-----------TG
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15964386  4 +  43084221 --------TC-----------TC
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         74999 10 +    196370 AATGAT--TC-----------TG
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          19180 10 +     40510 AATGAT--TC-----------TG
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15143817 10 -  15256731 AATGAT--CC-----------TG
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      38281 10 -     53260 AATGAT--CC-----------TG
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101148840 10 + 101219884 AATGAT--CC-----------TG
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                18709  9 -     21363 GATAAT---C-----------TA
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           764013  9 +    964067 GATAAT---C-----------TA
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_629495              2282  3 -      3120 ----TT--C--------------
i Chrysochloris_asiatica.ChrAsi_scaffold_629495         C 0 I 5
s Condylura_cristata.JH655880.1                          60622216 10 +  78930452 GATAAT--TC-----------AG
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         2184 10 -      5782 GGTAAC--TC-----------AG
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 282668 10 -    399297 GACAGT--TT-----------TG
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53035039  8 +  72327488 GAAAAC--T-------------G
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              1628  9 -     22648 AAT-AT--TC-----------AG
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            57519 10 -     70449 GATAAT--TC-----------AG
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  214289 10 -    956709 AATAAT--TC-----------TG
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 34324  4 -     67205 --------TC-----------TT
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                20873  4 +     26546 --------TC-----------TG
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             62013  4 -    236241 --------TC-----------TG
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          185682 10 -   6883506 CATAAT--TC-----------TG
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16849133 10 +  31942871 GATAAT--CC-----------TG
i Daubentonia_madagascariensis.ctg11                    I 1 C 0
s Delphinapterus_leucas.KZ290064.1                       80040647 10 -  96802777 GATAAT--TC-----------AG
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18701210 10 -  18957592 GATAAT--GC-----------AG
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 326246 10 +    993696 GATAAT--CG-----------AG
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   6887 10 +    151128 GATAAT--CC-----------AG
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   159648  4 +    228994 --------TC-----------TG
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3660360 10 +   4240102 GATTGT--CC-----------TG
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  2714 10 -     11986 GATTGT--CT-----------TG
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                39980  4 -     73477 --------TC-----------TG
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           22999933  7 -  44670279 AAATAT--g--------------
i Echinops_telfairi.JH980316.1                          I 2 I 2
s Elaphurus_davidianus.JRFZ01086400.1                     1496214 10 +   1727528 GACAAT--TC-----------AG
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7833010  7 +  15467074 TCATAT--A--------------
i Elephantulus_edwardii.JH947210.1                      I 1 I 10
s Ellobius_lutescens.LOEQ01003611.1                        243832  8 -    369425 GAAAAG--T-------------G
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Enhydra_lutris.KZ291749.1                              85877487 10 +  99434291 GCTAAT--TC-----------AG
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4708967 10 +   6522550 GATAAT--TC-----------AG
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11541335 10 +  16010500 gaaaaa--ta-----------aa
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48780850 10 -  48907691 AATGAT--CC-----------TG
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          318867 10 +    330699 GATAAT--TC-----------AG
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             65324 10 +     89355 GATAAT--TC-----------AG
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              9286 10 +     13586 GATAAT--TC-----------TG
i Eulemur_albifrons.k141_715837                         I 1 C 0
s Eulemur_collaris.k141_1015201                              2548 10 -      4292 GATAAT--TC-----------TG
i Eulemur_collaris.k141_1015201                         I 1 C 0
s Eulemur_coronatus.k141_3240342                            15681 10 +     36558 GATAAT--TC-----------AG
i Eulemur_coronatus.k141_3240342                        I 1 C 0
s Eulemur_flavifrons.k141_903901                            12006 10 +     60246 GATAAT--TC-----------TG
i Eulemur_flavifrons.k141_903901                        I 1 C 0
s Eulemur_fulvus.k141_653297                                15489 10 +    109717 GATAAT--TC-----------TG
i Eulemur_fulvus.k141_653297                            I 1 C 0
s Eulemur_macaco.k141_747087                                 3474 10 -     19505 GATAAT--TC-----------TG
i Eulemur_macaco.k141_747087                            I 1 C 0
s Eulemur_mongoz.k141_825972                                20147 10 +     27497 GATAAT--TC-----------TG
i Eulemur_mongoz.k141_825972                            I 1 C 0
s Eulemur_rubriventer.k141_411740                           22602 10 +     26808 GATAAT--TC-----------TG
i Eulemur_rubriventer.k141_411740                       I 1 C 0
s Eulemur_rufus.k141_1620292                                37337 10 +     46535 GATAAT--TC-----------TG
i Eulemur_rufus.k141_1620292                            I 1 C 0
s Eulemur_sanfordi.k141_186399                              20076 10 -     29447 GATAAT--TC-----------TG
i Eulemur_sanfordi.k141_186399                          I 1 C 0
s Felis_catus.AANG03133801.1                                  572 10 -       736 GATAAT--TC-----------AG
i Felis_catus.AANG03133801.1                            C 0 C 0
s Felis_catus_fca126.CM031420.1                         129285928 10 - 158578461 GATAAT--TC-----------AG
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 27027 10 +     52776 GATAAT--TC-----------AG
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13896149 15 -  19261668 --------CACTTGATAAATCTG
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     215336 10 -    847004 GATAAT--TC-----------TG
i Galago_moholi.ctg555                                  I 1 C 0
s Galago_senegalensis.k141_964197                           17697 10 -     43889 GATAAT--TC-----------TG
i Galago_senegalensis.k141_964197                       I 1 C 0
s Galagoides_demidoff.k141_1769638                          14842 10 +     27357 GATAAT--TC-----------CG
i Galagoides_demidoff.k141_1769638                      I 1 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               159584 10 +    324696 GATAAT--TC-----------TG
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    186012 10 -    189561 GGCAAT--TC-----------AG
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           16481 10 -     18683 GATAAT--TT-----------GG
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               9265 10 -     14630 AATGAT--CC-----------TG
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119656365 10 - 195582420 AATGAT--CC-----------TG
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   79798 10 +    118900 GGTAAT--TT-----------GG
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         6068 10 +     10286 GATAAT--CC-----------TG
i Hapalemur_alaotrensis.k141_1280836                    I 1 C 0
s Hapalemur_gilberti.k141_279011                             4546 10 -     11661 GATAAT--CC-----------TG
i Hapalemur_gilberti.k141_279011                        I 1 C 0
s Hapalemur_griseus.k141_1387522                             9873 10 +     56096 GATAAT--CC-----------TG
i Hapalemur_griseus.k141_1387522                        I 1 C 0
s Hapalemur_meridionalis.k141_186231                        33122 10 -     42470 GATAAT--CC-----------TG
i Hapalemur_meridionalis.k141_186231                    I 1 C 0
s Hapalemur_occidentalis.k141_797938                        49745 10 -     54384 GATAAT--CC-----------TG
i Hapalemur_occidentalis.k141_797938                    I 1 C 0
s Helogale_parvula.HelPar_flattened_line_22962              22660  9 +     53719 GATAAG--TC-----------A-
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                32883 10 -     91191 GACAAT--TC-----------AG
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2560640 15 +  31725842 --------ccttTGATAATTCTG
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               62880 10 +     73687 GATGAT--TC-----------TG
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              150650 10 +    277961 GATAAT--TC-----------AG
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      283048 10 -    477199 gataat--tt-----------tg
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_7653                5611 10 +     86108 GATAAT--TC-----------AG
i Hipposideros_galeritus.HipGal_scaffold_7653           C 0 C 0
s Hoolock_leuconedys.ctg649                                   108923 10 +    115816 AACAAT--CT-----------TG
i Hoolock_leuconedys.ctg649                                I 1 I 35
s Hyaena_hyaena.HyaHya_flattened_line_20729                 23129 10 -     67322 GATAAT--TC-----------AG
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           21265  4 -    119109 --------TC-----------TG
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_1816750                             1752 10 +      3202 AACAAC--CT-----------TG
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1633646                              1722 10 -      2102 AACAAC--CT-----------TG
i Hylobates_agilis.k141_1633646                         C 0 C 0
s Hylobates_klossii.k141_468230                              3239 10 +      5464 AACAAT--CT-----------TG
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14628586 10 -  25970782 AACAAT--CT-----------TG
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            1138 10 +      4161 AACAAC--CT-----------TG
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             37448 10 -     60944 AACAAT--CT-----------TG
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     9553  9 +     22540 -AGAAT--TC-----------TG
i Hystrix_cristata.HysCri_scaffold_50788                I 1865 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7130390 10 +  13083262 CATAAT--TC-----------TG
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   1545 10 +      3484 GATAAT--TC-----------TT
i Indri_indri.k141_2197838                              I 1 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              12859 10 +     17520 GATAAT--TC-----------AG
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               27478 10 +     37189 GCTAAT--TC-----------AG
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          54035 10 -    147782 AATGAT--TC-----------TG
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    5579 10 +     26176 GATAAT--TC-----------AG
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258411420 10 - 285822530 GATAAT--CC-----------TG
i Lemur_catta.scaffold_1                                I 1 C 0
s Lepilemur_ankaranensis.k141_884009                        28735 10 +     39228 GATATT--TC-----------TG
i Lepilemur_ankaranensis.k141_884009                    I 1 C 0
s Lepilemur_dorsalis.k141_134267                            58099 10 +     63517 GATATT--TC-----------TG
i Lepilemur_dorsalis.k141_134267                        I 1 C 0
s Lepilemur_ruficaudatus.k141_574529                        36479 10 -     38897 GATATT--TC-----------TG
i Lepilemur_ruficaudatus.k141_574529                    I 1 C 0
s Lepilemur_septentrionalis.k141_710646                      2525 10 -     13103 GATATT--TC-----------TG
i Lepilemur_septentrionalis.k141_710646                 I 1 C 0
s Leptonychotes_weddellii.KB714749.1                      3091463 10 -   3498232 aatAAT--TC-----------AG
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    20886 10 +     22452 GAAAAT--TC-----------TG
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            139793 10 +   3060487 GATAAT--TC-----------AG
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19252471 10 +  19376315 AATGAT--CC-----------TG
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           15287 10 +     84689 GATACT--TC-----------TG
i Loris_lydekkerianus.k141_550999                       I 1 C 0
s Loris_tardigradus.ctg97                                 3783026 10 +   6799190 GATACT--TC-----------TG
i Loris_tardigradus.ctg97                               I 1 C 0
s Loxodonta_africana.GL010040.1                          20598810 10 -  62548349 GATAAT--TC-----------TG
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11095216 10 +  39895028 GGTAAT--TC-----------AG
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             24222 10 +     74745 AATGAT--CC-----------TG
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12710683 10 +  12821369 AATGAT--CC-----------TG
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                3256 10 -     26467 AATGAT--CC-----------TG
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           51127 10 +     63263 AATGAT--CC-----------TG
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 3237 10 -     26361 AATGAT--CC-----------TG
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 6427 10 -      7381 AATGAT--CC-----------TG
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  49656 10 -     79256 AATGAT--CC-----------TG
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196039754 10 + 196197964 AATGAT--CC-----------TG
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11449924 10 +  11645122 AATGAT--CC-----------TG
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   8610 10 -     46448 AATGAT--CC-----------TG
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                6273 10 -     13212 AATGAT--CC-----------TG
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 19953 10 -     55006 AATGAT--CC-----------TG
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43845068 10 +  43892939 AATGAT--CC-----------TG
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               21237 10 -     24607 AATGAT--CC-----------TG
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               8607 10 -     27140 AATGAT--CC-----------TG
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43441643 10 -  43563597 AATGAT--CC-----------TG
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4454447 10 -   4543643 AATGAT--CC-----------TG
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36878262 10 +  64221397 cATAAT--TC-----------TG
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       65614 10 -    234502 GATAAT--TC-----------AG
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             6379 10 -     87323 GCTAAT--TC-----------AG
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 1285 10 +    115071 GAAAAT--TG-----------TG
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1051558 10 -  26018355 GAAAACTGT-------------G
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    2450 10 -     12939 GATAAT--TC-----------AG
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16514478 10 +  47401472 GATAAT--TC-----------TG
i Microcebus_murinus.CM007691.1                         I 1 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  41506  5 -     48017 GT--TT--C--------------
i Microgale_talazaci.MicTal_scaffold_34660              C 0 I 5
s Micronycteris_hirsuta.MicHir_scaffold_37978               24957 10 -     32043 GATAAT--GC-----------AG
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22824636  8 -  98408828 GAAAAG--T-------------G
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8213016 10 +  10048721 GATAAT--TC-----------CG
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            37505 10 +     45743 GATAAT--TC-----------CG
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         6189 10 +     29742 AATGAT--CC-----------TG
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        16959 10 -    104932 AATAAT--TC-----------AG
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     5161 10 -     12809 GATAAT--TC-----------TG
i Mirza_zaza.k141_593947                                I 1 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 150240 10 +    154973 GATAAT--TC-----------AG
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                163495 10 +    265003 GATAAT--GC-----------AG
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  6232 10 -     19904 GACAAT--TC-----------AG
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  150335  9 -    168139 GATAAG--TC-----------A-
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          24429 10 -    100666 GATAAT--TC-----------AG
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70771855 10 +  92629107 GAAAAC--TG-----------TG
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75493909 10 +  98207768 GAAAAC--TG-----------TG
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67560661 10 +  89017189 GAAAAC--TG-----------TG
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74336635 10 +  97876770 GAAAAC--TG-----------TG
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             14884 10 +     98495 AATAAT--CT-----------GA
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4428218 10 -  28371801 GCTAAT--TC-----------AG
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     93857  4 -    117718 --------TC-----------TT
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               971301 10 +   8389877 GATAAT--TC-----------AG
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5022722 10 +   6462685 GATAAT--TC-----------AG
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3468805 10 -   3747815 GATAAT--TC-----------AG
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        14046 10 +     66751 GATAAT--TC-----------AG
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             7658  9 -      8794 GACAAT---C-----------TG
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            120387 10 +    362372 GATAAT--TC-----------TG
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4490357 10 -  14209539 AATAAT--TC-----------AG
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3954831 10 -   4490290 GATAAT--TC-----------AC
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  50554 10 +     94413 GATAAT--GC-----------AG
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1817463                            878 10 -      1070 AACAAT--CT-----------TG
i Nomascus_annamensis.k141_1817463                      I 32 n 10
s Nomascus_concolor.k141_70405                                877 10 +      1153 AACGAT--CT-----------TG
i Nomascus_concolor.k141_70405                          C 0 C 0
s Nomascus_gabriellae.k141_1400361                            808 10 -      2203 AACAAC--CT-----------TG
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_2639                            9878  9 -     20157 -ATGCT--TT-----------TG
i Nomascus_siki_b.tarseq_2639                       I 1614 I 1624
s Nomascus_siki_a.k141_421408                                   722 10 +     16235 AACAAC--CT-----------TG
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                38081 10 +   3668941 GGTAAT--TC-----------AG
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65571962 10 -  95554990 GATAAT--TC-----------TG
i Nycticebus_bengalensis.LG16                           I 1 C 0
s Nycticebus_coucang.k141_771591                            15372 10 +     16181 gaTAAT--TC-----------TG
i Nycticebus_coucang.k141_771591                        I 1 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65680150 10 +  89412551 gataat--tc-----------tg
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     I 1 C 0
s Octodon_degus.JH651621.1                                3689316  4 +  10294119 --------tt-----------tt
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             685060 10 -   3126709 GATAAT--TC-----------AG
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1083664 10 +   1425656 GACAAT--TC-----------CG
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         41746 10 +     78940 GACAAT--TC-----------AG
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  130432  8 +    145789 GAAAAG--T-------------G
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  43126 10 +     62360 GAAAAT--TG-----------TG
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7228506 10 -   7562323 GATAAT--TC-----------AG
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              64278  7 -     66828 GAATAT--C--------------
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 I 2
s Oryctolagus_cuniculus.CM000803.1                      141883901 10 + 163896628 gaaaat--tc-----------tg
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      315219 10 -    505867 GGTAAT--TC-----------AG
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        5198 10 -     53940 GATAAT--TC-----------CG
i Otolemur_crassicaudatus.k141_505435                   I 1 C 0
s Otolemur_garnettii.GL873528.1                          18013171 10 -  38779656 GATAAT--TC-----------CG
i Otolemur_garnettii.GL873528.1                         I 1 C 0
s Ovis_aries.CM001582.2                                 134082669 10 - 275406953 GACAAT--TC-----------AG
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      83903 10 +    140051 GACAAT--TC-----------AG
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127578544 10 - 205426864 AATGAT--CC-----------TG
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120155704 10 - 196562556 AATGAT--CC-----------TG
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  39947 10 +    295523 GATAAT--TC-----------AG
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3643762 10 +  18214204 GATAAT--TC-----------AG
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5033410 10 -   6340057 GATAAT--TC-----------AG
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1071545 10 -   1292953 GACAAT--TC-----------AG
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188160432 10 - 188283584 AATGAT--CC-----------TG
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              3522 10 +     25005 AATGAT--CC-----------TG
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47517804 10 +  47705337 AATGAT--CC-----------TG
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 71795 10 -    104429 AATGAT--CC-----------TG
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   10327 10 +     14967 AATGAT--CC-----------TG
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 6192 10 -      7628 AATGAT--CC-----------TG
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    121434 10 -    135482 GATAAT--TC-----------AG
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          10863 10 -     23713 GATAAT--TC-----------TG
i Perodicticus_ibeanus.k141_117958                      I 1 C 0
s Perodicticus_potto.k141_1136815                           12003 10 +     61070 GATAAT--TC-----------TA
i Perodicticus_potto.k141_1136815                       I 1 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       2277 10 +     49596 GATAGT--CC-----------TA
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4955490 10 -   8017169 GAAAAT--TG-----------TG
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    17338  4 -     36578 --------CC-----------TA
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              2972 10 +      8220 GATAAT--TC-----------AC
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            99592 10 +    112873 GATAAT--TC-----------AG
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           9443 10 +     21690 GATAAT--TC-----------AG
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       26127 10 +     44506 AATGAT--TC-----------TG
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        26340 10 +     67491 AATGAT--TC-----------TG
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      16579 10 -     98129 AATGAT--TC-----------TG
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     26180 10 +    147771 AATGAT--TC-----------TG
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         2815 10 -     43940 AATGAT--TC-----------TG
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          6898 10 -     55515 AATGAT--TC-----------TG
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         26252 10 +    152463 AATGAT--TC-----------TG
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       4060 10 -    119457 AATGAT--TC-----------TG
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         15975 10 +    134592 AATGAT--TC-----------TG
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          26562 10 -     75465 AATGAT--TC-----------TG
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              191175 10 -    373494 AATGAT--CC-----------TG
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19811822 10 +  19899266 AATGAT--CC-----------TG
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                3985 10 -      9567 GATGAT--TC-----------TG
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6852794 10 +  12164890 GATAAT--CC-----------TG
i Prolemur_simus.MPIZ01000048.1                         I 1 C 0
s Propithecus_coronatus.k141_1353159                         7880 10 +     11805 GATAAT--TC-----------TG
i Propithecus_coronatus.k141_1353159                    I 1 C 0
s Propithecus_diadema.k141_577245                           47215 10 +     52369 GATAAT--TC-----------TG
i Propithecus_diadema.k141_577245                       I 1 C 0
s Propithecus_edwardsi.k141_1317105                         39602 10 -     44753 GATAAT--TC-----------TG
i Propithecus_edwardsi.k141_1317105                     I 1 C 0
s Propithecus_perrieri.k141_7554                            21525 10 +     27322 GATAAT--TC-----------TG
i Propithecus_perrieri.k141_7554                        I 1 C 0
s Propithecus_tattersalli.k141_907138                       21173 10 -     53241 GATAAT--TC-----------TG
i Propithecus_tattersalli.k141_907138                   I 1 C 0
s Propithecus_verreauxi.k141_158021                         43436 10 -     48185 GATAAT--TC-----------TG
i Propithecus_verreauxi.k141_158021                     I 1 C 0
s Psammomys_obesus.NESX01026517.1                           38280 10 +     77221 GAAAAT--TG-----------TG
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            6139 10 -     27784 GATAAT--GC-----------AG
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        250347 10 -    344369 GCTAAT--TC-----------AG
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Puma_concolor.QAVW01000427.1                          131540058 10 - 161321710 GATAAT--TC-----------AG
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                20528 10 +     68503 GACAAT--TC-----------AG
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13917691 10 +  90463843 gaaaat--tt-----------tg
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1792650 10 +   2252614 GATAAT--TC-----------AG
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                       938 10 -      4338 GACAAT--TC-----------AG
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15676583 10 -  43202129 AATGAT--TC-----------TG
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        8496 10 +     34089 AATGAT--TC-----------TG
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              8436 10 -     60842 AATGAT--TC-----------TG
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              8530 10 +     67014 AATGAT--TC-----------TG
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              8507 10 +     60816 AATGAT--TC-----------TG
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 8444 10 -     76454 AATGAT--TC-----------TG
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17345230 10 -  30362882 AATGAT--TC-----------TG
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         24551 10 -     62485 AATGAT--TC-----------TG
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   39669 10 -    114521 GATAAT--TC-----------AG
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  105060 10 -    120886 AAAAAT--TG-----------TG
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 I 430
s Solenodon_paradoxus.SolPar_flattened_line_1012            23594 10 +    739146 GATAAT--TC-----------AG
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17770047  9 -  27805282 gat-at--tt-----------ca
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2244094 10 +   2842873 CATAAT--TC-----------TG
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             238861 10 -    276980 GCTAAT--TC-----------AG
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            33252  9 +     62062 GATAAG--TC-----------A-
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189275034 10 + 218635234 GATAAT--TC-----------AG
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        18845 10 -  13920577 AACAAT--CT-----------TG
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                2366 10 +     20549 GATAAT--TC-----------AG
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               17331  9 +     45698 GATAAT---C-----------TG
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      810830 10 +   1148477 GATAAT--CC-----------AG
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  61472 10 +     99546 GATAAT--CC-----------AG
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194011965 10 - 194193292 AATGAT--CC-----------TG
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                   441 10 -      3104 GATAAT--TC-----------TG
i Tolypeutes_matacus.TolMat_scaffold_475685             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  138133 10 -    259118 GATAAT--GC-----------TG
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trichechus_manatus.JH594618.1                          16089889 10 +  31416278 GATAAT--TC-----------TG
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2797799 10 -   3938065 GATAAT--TA-----------TG
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    9734 10 +     13056 GACAAT--TA-----------TG
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69317235 10 -  96451834 GATAAT--TC-----------AG
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                     136 10 +    136657 GATTAT--TC-----------AG
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 C 0
s Ursus_maritimus.KK498671.1                              6520763 10 +  28682327 GATAAT--TC-----------AG
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  9437 10 -     20643 GATAAT--TC-----------TG
i Varecia_rubra.k141_432109                             I 1 C 0
s Varecia_variegata.k141_775891                             28972 10 -     33872 GATAAT--TC-----------TG
i Varecia_variegata.k141_775891                         I 1 C 0
s Vicugna_pacos.KN269600.1                                1528274 10 -   2331223 gatAAT--TC-----------AC
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                144446 10 -    281493 GGTAAT--TC-----------AG
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       131589 10 -    134049 CATATT--TC-----------TG
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        219916 10 -    227762 GATAAT--TC-----------AG
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            1982 10 -     13665 GATAAT--TC-----------AG
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Ochotona_princeps.JH802095.1                            4999348 675 -  23139505 I
e Tragulus_javanicus.TraJav_scaffold_14717                   9488 743 +     90398 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Manis_pentadactyla.KN017078.1                             39794  0 +     58827 C
e Manis_javanica.JSZB01003966.1                            152204  0 +    252755 C
e Equus_przewalskii.ATBW01073585.1                          16581  0 +     92910 C
e Equus_caballus.CM000402.2                              13355091  0 +  41866177 C
e Equus_asinus.JREZ01000062.1                             5856591  0 -   7175178 C
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Zapus_hudsonius.ZapHud_scaffold_256618                      408  0 -      2259 C
e Jaculus_jaculus.JH725517.1                              8577673  0 +  11848649 C
e Allactaga_bullata.AllBul_scaffold_141108                    666  0 -      7259 C
e Trachypithecus_pileatus.k141_1022309                       5226  0 +     13828 C
e Trachypithecus_phayrei.ctg3                            44662914  0 -  44834318 C
e Trachypithecus_obscurus.k141_1115109                       8130  0 -     28054 C
e Trachypithecus_melamera.k141_699241                        2986  0 -     24393 C
e Trachypithecus_leucocephalus.k141_381681                   3005  0 +     12481 C
e Trachypithecus_laotum.k141_760702                          4719  0 +     14371 C
e Trachypithecus_hatinhensis.k141_504423                     6067  0 -     15592 C
e Trachypithecus_germaini.k141_868450                        3883  0 -     11566 C
e Trachypithecus_geei.k141_670367                           46082  0 -     54611 C
e Trachypithecus_francoisi.k141_768164                       4689  0 -     14244 C
e Trachypithecus_cristatus.k141_1011511                      5261  0 -     12939 C
e Trachypithecus_crepusculus.k141_1588528                   23360  0 -     32910 C
e Trachypithecus_auratus.k141_738098                        29800  0 +     38948 C
e Tarsius_wallacei.k141_48636                               64696  0 +     65473 C
e Tarsius_lariang.k141_609102                               31387  0 +     42269 C
e Semnopithecus_vetulus.k141_1143185                        16479  0 +     30600 C
e Semnopithecus_schistaceus.k141_387461                     33457  0 +     42640 C
e Semnopithecus_priam.k141_410937                           40312  0 +     46263 C
e Semnopithecus_johnii.k141_785014                         121532  0 +    130994 C
e Semnopithecus_hypoleucos.k141_761524                      11528  0 +     20762 C
e Semnopithecus_entellus.k141_1572367                        6153  0 +     15331 C
e Rhinopithecus_strykeri.ctg4                            44859307  0 -  45163003 C
e Rhinopithecus_bieti.k119_554384                            2917  0 -     17045 C
e Pygathrix_nigripes_a.k141_101123                             8537  0 +     18040 C
e Pygathrix_nigripes_b.ctg79                                 6809148  0 +   6970761 C
e Pygathrix_cinerea.k141_374971                             32651  0 +     56732 C
e Propithecus_coquerelli.NW_012147863.1                     21633  0 -     30946 C
e Presbytis_mitrata.k141_860013                              8661  0 +     14865 C
e Presbytis_comata.k141_672698                               8546  0 -     15069 C
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000036.1               26743271  0 +  26888534 C
e Piliocolobus_kirkii.k141_929665                            4788  0 +      7694 C
e Piliocolobus_gordonorum.k141_1270531                       5421  0 -     17985 C
e Piliocolobus_badius.k141_1987485                           4802  0 -      5908 C
e Nasalis_larvatus.k141_153429                              11264  0 +     48152 C
e Colobus_polykomos.k141_1406057                            19335  0 +     23629 C
e Colobus_guereza.LG08                                  147667351  0 + 156195979 C
e Colobus_angolensis.KN985967.1                          10889423  0 +  10971483 C
e Cephalopachus_bancanus.k141_702587                        12545  0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530  0 +    345090 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               17578 4 +    209709 T--TTT
s Acinonyx_jubatus.LLWD01000356.1                         2039543 4 +   3721120 T--TTT
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    117803 4 -    189883 T--TTT
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10663500 4 +  23371972 T--TTT
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7100035 4 -  16596857 T--TTT
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   5451 4 -     60446 T--TTT
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         6168 4 -     29318 T--TTT
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         5106 4 +     38766 T--TTT
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          6062 4 -     80423 T--TTT
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              1035 4 +     19852 T--TTT
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                3290 4 -     12443 T--TTT
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                              589 4 +      5070 T--TTT
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                  334 4 -      1641 T--TTT
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          3073 4 -     24210 T--TTT
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           29655 4 -     30219 T--TTT
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_405616                              5491 4 +     16794 T--TTT
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                             623 4 -      1470 T--TTT
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             4768 4 -      9835 T--TTT
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3525546 4 +   4113121 C--TTT
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      392586 4 -    631301 T--TTT
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             2977 4 +     55446 C--TTT
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 66381 4 +     78111 T--TTT
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            9327 4 +     22701 T--TTT
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5753285 4 +   9889416 T--TTT
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             9883 4 -    104377 T--TTT
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               9890 4 +     23246 T--TTT
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     2422 3 +     11424 T--TT-
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        6499 4 +      9265 T--TTT
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                11011 4 -     29036 T--TTT
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9543177 4 +  39197703 T--TTT
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             64450 4 +     85812 T--TTT
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                15463 4 +     89302 T--TTT
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             19964 4 -     58268 T--TTT
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             67958 4 +    119057 T--TTT
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               9927 4 -     25888 T--TTT
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                10983 4 -     16375 T--TTT
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               4599 4 +      6337 T--TTT
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26384034 4 +  51448160 T--TTT
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        9207 4 -     13118 T--TTT
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   48008 4 -     72089 C--TTT
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   302152 4 -   6870073 C--TTT
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22956250 4 + 161108492 C--TNT
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     418515 4 +    998990 C--TTT
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22664904 4 + 158972876 C--TCT
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               674668 4 +   1914593 C--TTT
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               117830 4 -    171031 T--TTT
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 16850 4 +    125063 T--TTT
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                18897 4 -    216513 T--TTT
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       11440 4 -    134917 T--TTT
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3223176 4 -   8989139 T--TTT
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           400877 4 -  15254737 T--TTT
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2976614 4 +   6889770 T--TTT
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11526376 4 +  39901454 C--TTC
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   21350 4 +     87036 C--TTC
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11273059 4 -  35597290 C--TTC
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11095770 4 +  39895921 C--TTC
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16462555 4 -  44759192 C--TTC
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21333488 4 + 157394656 C--TTT
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135711843 4 - 157403528 C--TTT
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_529800                   237 4 -      2320 G--TTA
i Capromys_pilorides.CapPil_scaffold_529800             C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               62004 4 +     67245 T--TTT
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_417865                    208 4 -       402 T--TTT
i Castor_canadensis.CasCan_scaffold_417865              I 13 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   162690 4 -    276539 T--TTT
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15789705 4 -  24422027 A--CTT
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15801644 4 -  24440124 A--CTT
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       179816 4 +    436027 A--CTT
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18895552 4 -  29618158 T--TTT
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                12202 4 -     26817 T--TTT
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                16446 4 +     25043 T--TTT
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4367609 2 +   7569818 T----T
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         7366 2 -      9338 T----T
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6559392 4 +   6739814 T--TTT
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      30869 4 +     60454 T--TTT
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          6073 4 -     21101 T--TTT
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         63383 4 -    107033 T--TTT
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        6246 4 -     17608 T--TTT
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          3411 4 +     45019 T--TTT
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           3687 4 +     15177 T--TTT
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          6293 4 +     16677 T--TTT
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           28483 4 +     35983 T--TTT
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11995014 4 +  12117833 T--TTT
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46481990 4 +  46592721 T--TTT
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                        107 4 -     27215 C--TTT
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       6307 4 +     35577 T--TTT
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        6101 4 -     25661 T--TTT
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        6273 4 -     17744 T--TTT
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        25642 4 +     37128 T--TTT
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           4614 2 -      6963 T----A
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           63208 4 -     68416 T--TTT
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                           12314 4 +     13308 T--TTT
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             9488 4 -     18223 T--TTC
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              1226 4 +    188999 T--TTC
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           45525 4 +     57117 T--TTC
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          50205 4 +     54541 T--TTC
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15964390 4 +  43084221 G--TTT
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         75009 4 +    196370 T--TTT
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          19190 4 +     40510 T--TTT
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15143827 4 -  15256731 T--TTT
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      38291 4 -     53260 T--TTT
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101148850 4 + 101219884 T--TTT
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                18718 2 -     21363 T----T
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           764022 2 +    964067 T----T
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Condylura_cristata.JH655880.1                          60622226 4 +  78930452 T--TTC
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         2194 4 -      5782 T--TTT
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 282678 4 -    399297 T--TTA
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53035047 4 +  72327488 C--TTT
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              1637 4 -     22648 T--TTA
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            57529 4 -     70449 T--TCT
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  214299 4 -    956709 C--TTT
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 I 1
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 34328 4 -     67205 G--TTT
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                20877 4 +     26546 G--CTT
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             62017 4 -    236241 G--TTT
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          185692 2 -   6883506 T----T
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16849143 4 +  31942871 T--TTT
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80040657 4 -  96802777 T--TTT
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18701220 4 -  18957592 T--TTT
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 326256 2 +    993696 T----T
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   6897 2 +    151128 T----T
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   159652 4 +    228994 G--TTT
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3660370 4 +   4240102 T--TTT
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  2724 4 -     11986 T--TTT
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                39984 4 -     73477 G--TTT
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1496224 4 +   1727528 C--TTT
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        243840 4 -    369425 C--TTT
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Enhydra_lutris.KZ291749.1                              85877497 4 +  99434291 C--TTT
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4708977 4 +   6522550 C--TTT
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11541345 4 +  16010500 t--ttt
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48780860 4 -  48907691 T--TTT
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          318877 4 +    330699 T--TTT
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             65334 4 +     89355 T--TTT
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              9296 4 +     13586 T--TTT
i Eulemur_albifrons.k141_715837                         C 0 I 113
s Eulemur_collaris.k141_1015201                              2558 4 -      4292 T--TTT
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            15691 4 +     36558 T--TTT
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            12016 4 +     60246 T--TTT
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                15499 4 +    109717 T--TTT
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 3484 4 -     19505 T--TTT
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                20157 4 +     27497 T--TTT
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           22612 4 +     26808 T--TTT
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                37347 4 +     46535 T--TTT
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              20086 4 -     29447 T--TTT
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.AANG03133801.1                                  582 4 -       736 T--TTT
i Felis_catus.AANG03133801.1                            C 0 C 0
s Felis_catus_fca126.CM031420.1                         129285938 4 - 158578461 T--TTT
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 27037 4 +     52776 T--TTT
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13896164 4 -  19261668 G--TTT
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     215346 4 -    847004 T--TTG
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           17707 4 -     43889 T--TTG
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          14852 4 +     27357 T--CTT
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               159594 4 +    324696 T--TTT
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    186022 4 -    189561 C--TTT
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           16491 4 -     18683 T--TTT
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               9275 4 -     14630 T--TTT
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119656375 4 - 195582420 T--TTT
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   79808 4 +    118900 T--TTT
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         6078 4 +     10286 T--TTT
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             4556 4 -     11661 T--TTT
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             9883 4 +     56096 T--TTT
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        33132 4 -     42470 T--TTT
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        49755 4 -     54384 T--TTT
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              22669 2 +     53719 ----TT
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                32893 4 -     91191 C--TTT
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2560655 4 +  31725842 G--TTT
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               62890 4 +     73687 C--TTC
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              150660 4 +    277961 T--TTT
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      283058 4 -    477199 t--ttt
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_7653                5621 4 +     86108 T--TTT
i Hipposideros_galeritus.HipGal_scaffold_7653           C 0 I 73
s Hoolock_leuconedys.ctg315                                   350281 4 +    431944 T--TTT
i Hoolock_leuconedys.ctg315                                I 10 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 23139 4 -     67322 T--TTT
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           21269 4 -    119109 G--TTT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_1816750                             1762 4 +      3202 T--TTT
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1633646                              1732 4 -      2102 T--TTT
i Hylobates_agilis.k141_1633646                         C 0 C 0
s Hylobates_klossii.k141_468230                              3249 4 +      5464 T--TTT
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14628596 4 -  25970782 T--TTT
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            1148 4 +      4161 T--TTT
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             37458 4 -     60944 T--TTT
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     9562 4 +     22540 C--TTT
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7130400 3 +  13083262 T--T-T
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   1555 4 +      3484 T--TTT
i Indri_indri.k141_2197838                              C 0 I 50
s Inia_geoffrensis.IniGeo_flattened_line_66725              12869 4 +     17520 T--TTT
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               27488 4 +     37189 T--TTT
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          54045 4 -    147782 T--TTT
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    5589 4 +     26176 C--TTT
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258411430 4 - 285822530 T--TTT
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        28745 4 +     39228 T--TTT
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            58109 4 +     63517 T--TTT
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        36489 4 -     38897 T--TTT
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      2535 4 -     13103 T--TTT
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3091473 4 -   3498232 T--TTT
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    20896 4 +     22452 T--TTT
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            139803 4 +   3060487 T--TTT
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19252481 4 +  19376315 T--TTT
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           15297 4 +     84689 T--TTT
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3783036 4 +   6799190 T--TTT
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20598820 4 -  62548349 C--TCC
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11095226 4 +  39895028 C--TTC
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             24232 4 +     74745 T--TTT
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12710693 4 +  12821369 T--TTT
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                3266 4 -     26467 T--TTT
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           51137 4 +     63263 T--TTT
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 3247 4 -     26361 C--TTT
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 6437 4 -      7381 T--TTT
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  49666 4 -     79256 T--TTT
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196039764 4 + 196197964 T--TTT
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11449934 4 +  11645122 T--TTT
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   8620 4 -     46448 T--TTT
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                6283 4 -     13212 T--TTT
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 19963 4 -     55006 T--TTT
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43845078 4 +  43892939 T--TTT
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               21247 4 -     24607 T--TTT
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               8617 4 -     27140 T--TTT
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43441653 4 -  43563597 T--TTT
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4454457 4 -   4543643 T--TTT
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36878272 3 +  64221397 T--T-T
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       65624 4 -    234502 C--GTT
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             6389 4 -     87323 C--TTT
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 1295 4 +    115071 T--TTT
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1051568 4 -  26018355 C--TGT
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    2460 4 -     12939 T--TTT
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16514488 4 +  47401472 T--TTT
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               24967 4 -     32043 T--TTT
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22824644 4 -  98408828 C--TTT
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8213026 4 +  10048721 T--TTT
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            37515 4 +     45743 T--TTT
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         6199 4 +     29742 T--TTT
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        16969 4 -    104932 T--TTT
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     5171 4 -     12809 T--TTT
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 150250 4 +    154973 T--TTT
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                163505 4 +    265003 T--TTT
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  6242 4 -     19904 C--TTC
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  150344 2 -    168139 ----TT
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          24439 4 -    100666 C--TTT
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70771865 4 +  92629107 T--TTT
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75493919 4 +  98207768 T--TTT
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67560671 4 +  89017189 T--TTT
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74336645 4 +  97876770 T--TTT
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             14894 4 +     98495 A--TTT
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4428228 4 -  28371801 C--TTT
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     93861 4 -    117718 G--TTT
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               971311 4 +   8389877 C--TTT
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5022732 4 +   6462685 C--TTT
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3468815 4 -   3747815 C--TTT
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        14056 4 +     66751 C--TTT
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             7667 2 -      8794 G----G
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            120397 4 +    362372 T--TTC
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4490367 4 -  14209539 T--TTT
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3954841 4 -   4490290 T--TTT
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  50564 4 +     94413 T--TTT
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_762468                             267 4 -      2755 T--TTT
i Nomascus_annamensis.k141_762468                       I 10 C 0
s Nomascus_concolor.k141_70405                                887 4 +      1153 T--TTT
i Nomascus_concolor.k141_70405                          C 0 C 0
s Nomascus_gabriellae.k141_1400361                            818 4 -      2203 T--TTT
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_2374                            2506 4 +      8673 T--TTT
i Nomascus_siki_b.tarseq_2374                       I 269 I 664
s Nomascus_siki_a.k141_421408                                   732 4 +     16235 T--TTT
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                38091 4 +   3668941 C--TTC
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65571972 4 -  95554990 T--TTT
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_771591                            15382 4 +     16181 T--TTT
i Nycticebus_coucang.k141_771591                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65680160 4 +  89412551 t--ttt
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Octodon_degus.JH651621.1                                3689320 4 +  10294119 g--ttt
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             685070 4 -   3126709 T--TTT
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1083674 4 +   1425656 C--TTT
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         41756 4 +     78940 C--TTT
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  130440 4 +    145789 C--TTT
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  43136 4 +     62360 C--TTT
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7228516 3 -   7562323 T--T-T
i Orcinus_orca.KB316965.1                               C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141883911 4 + 163896628 t--ttt
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      315229 4 -    505867 C--TTC
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        5208 4 -     53940 T--TTG
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18013181 4 -  38779656 T--TTG
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134082679 4 - 275406953 C--TTT
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      83913 4 +    140051 C--TTT
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127578554 4 - 205426864 T--TTT
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120155714 4 - 196562556 T--TTT
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  39957 4 +    295523 T--TTT
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3643772 4 +  18214204 T--TTT
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5033420 4 -   6340057 T--TTT
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1071555 4 -   1292953 C--TTT
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188160442 4 - 188283584 T--TTT
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              3532 4 +     25005 T--TTT
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47517814 4 +  47705337 T--TTT
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 71805 4 -    104429 T--TTT
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   10337 4 +     14967 T--TTT
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 6202 4 -      7628 T--TTT
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    121444 4 -    135482 T--TTT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          10873 4 -     23713 T--TTT
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           12013 4 +     61070 T--TTT
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       2287 4 +     49596 T--TTT
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4955500 4 -   8017169 C--TTT
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    17342 4 -     36578 G--TTT
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              2982 4 +      8220 T--TTT
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            99602 4 +    112873 C--TTT
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           9453 4 +     21690 T--TTT
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       26137 4 +     44506 T--TTC
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        26350 4 +     67491 T--TTC
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      16589 4 -     98129 T--TTC
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     26190 4 +    147771 T--TTC
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         2825 4 -     43940 T--TTC
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          6908 4 -     55515 T--TTC
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         26262 4 +    152463 T--TTC
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       4070 4 -    119457 T--TTC
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         15985 4 +    134592 T--TTC
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          26572 4 -     75465 T--TTC
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              191185 4 -    373494 T--TTT
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19811832 4 +  19899266 T--TTT
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                3995 4 -      9567 C--TTC
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6852804 4 +  12164890 T--TTT
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coronatus.k141_1353159                         7890 4 +     11805 T--TTT
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           47225 4 +     52369 T--TTT
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         39612 4 -     44753 T--TTT
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            21535 4 +     27322 T--TTT
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       21183 4 -     53241 T--TTT
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         43446 4 -     48185 T--TTT
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           38290 4 +     77221 T--TTT
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            6149 4 -     27784 T--TTT
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        250357 4 -    344369 C--TTT
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Puma_concolor.QAVW01000427.1                          131540068 4 - 161321710 T--TTT
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                20538 4 +     68503 C--TTT
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13917701 4 +  90463843 t--ttt
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1792660 4 +   2252614 T--TTT
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                       948 4 -      4338 C--TTT
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15676593 4 -  43202129 T--TTT
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        8506 4 +     34089 T--TTT
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              8446 4 -     60842 T--TTT
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              8540 4 +     67014 T--TTT
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              8517 4 +     60816 T--TTT
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 8454 4 -     76454 T--TTT
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17345240 4 -  30362882 T--TTT
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         24561 4 -     62485 T--TTT
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   39679 4 -    114521 T--CTC
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  105500 4 -    120886 c--ttt
i Sigmodon_hispidus.SigHis_scaffold_11332               I 430 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            23604 4 +    739146 T--TTT
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17770056 4 -  27805282 t--tTA
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2244104 3 +   2842873 T--T-T
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             238871 4 -    276980 T--TTT
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            33261 2 +     62062 ----TT
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189275044 4 + 218635234 T--TTT
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        18855 4 -  13920577 T--TTT
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                2376 4 +     20549 T--TTT
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               17340 2 +     45698 G----G
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      810840 4 +   1148477 TTT--T
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  61482 4 +     99546 TTT--T
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194011975 4 - 194193292 T--TTT
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                   451 2 -      3104 T----A
i Tolypeutes_matacus.TolMat_scaffold_475685             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  138143 4 -    259118 T--TTT
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trichechus_manatus.JH594618.1                          16089899 4 +  31416278 C--TTC
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2797809 4 -   3938065 T--TCT
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    9744 4 +     13056 T--TTT
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69317245 3 -  96451834 T--T-T
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                     146 4 +    136657 A--CTT
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 C 0
s Ursus_maritimus.KK498671.1                              6520773 4 +  28682327 T--TTT
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  9447 4 -     20643 T--TTT
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             28982 4 -     33872 T--TTT
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1528284 4 -   2331223 T--TTT
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                144456 4 -    281493 C--TTC
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       131599 4 -    134049 T--TTT
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        219926 4 -    227762 T--TTT
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            1992 4 -     13665 T--TTT
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Ochotona_princeps.JH802095.1                            4999348 675 -  23139505 I
e Chrysochloris_asiatica.ChrAsi_scaffold_629495              2285 5 -      3120 I
e Tragulus_javanicus.TraJav_scaffold_14717                   9488 743 +     90398 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Orycteropus_afer.OryAfe_flattened_line_13509              64285 2 -     66828 I
e Microgale_talazaci.MicTal_scaffold_34660                  41511 5 -     48017 I
e Manis_pentadactyla.KN017078.1                             39794 0 +     58827 C
e Manis_javanica.JSZB01003966.1                            152204 0 +    252755 C
e Equus_przewalskii.ATBW01073585.1                          16581 0 +     92910 C
e Equus_caballus.CM000402.2                              13355091 0 +  41866177 C
e Equus_asinus.JREZ01000062.1                             5856591 0 -   7175178 C
e Elephantulus_edwardii.JH947210.1                        7833017 10 +  15467074 I
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Echinops_telfairi.JH980316.1                           22999940 2 -  44670279 I
e Zapus_hudsonius.ZapHud_scaffold_256618                      408 0 -      2259 C
e Jaculus_jaculus.JH725517.1                              8577673 0 +  11848649 C
e Allactaga_bullata.AllBul_scaffold_141108                    666 0 -      7259 C
e Trachypithecus_pileatus.k141_1022309                       5226 0 +     13828 C
e Trachypithecus_phayrei.ctg3                            44662914 0 -  44834318 C
e Trachypithecus_obscurus.k141_1115109                       8130 0 -     28054 C
e Trachypithecus_melamera.k141_699241                        2986 0 -     24393 C
e Trachypithecus_leucocephalus.k141_381681                   3005 0 +     12481 C
e Trachypithecus_laotum.k141_760702                          4719 0 +     14371 C
e Trachypithecus_hatinhensis.k141_504423                     6067 0 -     15592 C
e Trachypithecus_germaini.k141_868450                        3883 0 -     11566 C
e Trachypithecus_geei.k141_670367                           46082 0 -     54611 C
e Trachypithecus_francoisi.k141_768164                       4689 0 -     14244 C
e Trachypithecus_cristatus.k141_1011511                      5261 0 -     12939 C
e Trachypithecus_crepusculus.k141_1588528                   23360 0 -     32910 C
e Trachypithecus_auratus.k141_738098                        29800 0 +     38948 C
e Tarsius_wallacei.k141_48636                               64696 0 +     65473 C
e Tarsius_lariang.k141_609102                               31387 0 +     42269 C
e Semnopithecus_vetulus.k141_1143185                        16479 0 +     30600 C
e Semnopithecus_schistaceus.k141_387461                     33457 0 +     42640 C
e Semnopithecus_priam.k141_410937                           40312 0 +     46263 C
e Semnopithecus_johnii.k141_785014                         121532 0 +    130994 C
e Semnopithecus_hypoleucos.k141_761524                      11528 0 +     20762 C
e Semnopithecus_entellus.k141_1572367                        6153 0 +     15331 C
e Rhinopithecus_strykeri.ctg4                            44859307 0 -  45163003 C
e Rhinopithecus_bieti.k119_554384                            2917 0 -     17045 C
e Pygathrix_nigripes_a.k141_101123                             8537 0 +     18040 C
e Pygathrix_nigripes_b.ctg79                                 6809148 0 +   6970761 C
e Pygathrix_cinerea.k141_374971                             32651 0 +     56732 C
e Propithecus_coquerelli.NW_012147863.1                     21633 0 -     30946 C
e Presbytis_mitrata.k141_860013                              8661 0 +     14865 C
e Presbytis_comata.k141_672698                               8546 0 -     15069 C
e Pithecia_vanzolinii.k141_831006                           15424 0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514 0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521 0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292 0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093 0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038 0 +     78826 C
e Pithecia_albicans.k141_991845                             45662 0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000036.1               26743271 0 +  26888534 C
e Piliocolobus_kirkii.k141_929665                            4788 0 +      7694 C
e Piliocolobus_gordonorum.k141_1270531                       5421 0 -     17985 C
e Piliocolobus_badius.k141_1987485                           4802 0 -      5908 C
e Nasalis_larvatus.k141_153429                              11264 0 +     48152 C
e Colobus_polykomos.k141_1406057                            19335 0 +     23629 C
e Colobus_guereza.LG08                                  147667351 0 + 156195979 C
e Colobus_angolensis.KN985967.1                          10889423 0 +  10971483 C
e Cephalopachus_bancanus.k141_702587                        12545 0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530 0 +    345090 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               17582  5 +    209709 C--------AGAG
s Acinonyx_jubatus.LLWD01000356.1                         2039547  5 +   3721120 C--------AGAG
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    117807  5 -    189883 C--------AGAG
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10663504  5 +  23371972 C--------AGAA
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7100039  5 -  16596857 C--------AGAA
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   5455  5 -     60446 C--------AGAG
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         6172  5 -     29318 C--------AGAG
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         5110  5 +     38766 C--------AGAG
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          6066  5 -     80423 C--------AGAG
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              1039  5 +     19852 C--------AGAG
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                3294  5 -     12443 C--------AGAG
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                              593  5 +      5070 C--------AGAG
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                  338  5 -      1641 C--------AGAG
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          3077  5 -     24210 C--------AGAG
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           29659  5 -     30219 C--------AGAG
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_405616                              5495  5 +     16794 C--------AGAG
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                             627  5 -      1470 C--------AGAG
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             4772  5 -      9835 C--------AGAG
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3525550 13 +   4113121 CAGGGCCTGATAG
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      392590  5 -    631301 C--------ATAG
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             2981 13 +     55446 CAGGGCCTGATAG
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 66385  5 +     78111 C--------AGAG
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            9331  5 +     22701 C--------AGAG
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5753289  5 +   9889416 C--------AGAG
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             9887  5 -    104377 C--------AGAG
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               9894  5 +     23246 C--------AGAG
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     2425  3 +     11424 ----------CAG
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        6503  5 +      9265 C--------GGAG
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                11015  5 -     29036 T--------ATAG
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9543181  5 +  39197703 C--------AGAG
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             64454  5 +     85812 C--------AGAG
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                15467  5 +     89302 C--------AGAG
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             19968  5 -     58268 C--------AGAG
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             67962  5 +    119057 C--------AGAG
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               9931  5 -     25888 C--------AGAG
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                10987  5 -     16375 C--------AGAG
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               4603  5 +      6337 C--------AGAG
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26384038  5 +  51448160 C--------AGAG
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        9211  5 -     13118 C--------AGAG
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   48012 13 -     72089 CAGGGCCCAATAG
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   302156 13 -   6870073 CAGGGCCTGACAG
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22956254 13 + 161108492 CAGGGCCTGACAG
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     418519 13 +    998990 CAGGGCCTGACAG
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22664908 13 + 158972876 CAGGGCCTGACAG
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               674672 13 +   1914593 CAGGGCCTGACAG
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               117834  5 -    171031 C--------AGAG
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 16854  5 +    125063 C--------AGAG
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                18901  5 -    216513 C--------AGAG
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       11444  5 -    134917 C--------AGAG
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3223180  5 -   8989139 C--------AGAG
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           400881  5 -  15254737 C--------AGAG
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2976618  5 +   6889770 C--------AGAG
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11526380  5 +  39901454 C--------AGAG
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   21354  5 +     87036 C--------AGAG
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11273063  5 -  35597290 C--------AGAG
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11095774  5 +  39895921 C--------AGAG
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16462559  5 -  44759192 C--------AGAG
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21333492 13 + 157394656 CAGGGCCCGATCG
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135711847 13 - 157403528 CAGGGCCCGATCG
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_529800                   241  5 -      2320 C--------AGAA
i Capromys_pilorides.CapPil_scaffold_529800             C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               62008  5 +     67245 C--------ATAG
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_417865                    212  5 -       402 T--------AGAG
i Castor_canadensis.CasCan_scaffold_417865              C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   162694  5 -    276539 C--------AGAG
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15789709  5 -  24422027 C--------ATAG
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15801648  5 -  24440124 C--------ATAG
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       179820  5 +    436027 C--------ATAG
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18895556  5 -  29618158 C--------AAAG
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                12206  5 -     26817 C--------AAAG
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                16450  5 +     25043 C--------AAAG
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4367611  5 +   7569818 C--------AGAG
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         7368  5 -      9338 C--------AGAG
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6559396  5 +   6739814 C--------AGAG
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      30873  5 +     60454 C--------AGAG
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          6077  5 -     21101 C--------AGAG
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         63387  5 -    107033 C--------AGAG
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        6250  5 -     17608 C--------AGAG
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          3415  5 +     45019 T--------AGAG
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           3691  5 +     15177 C--------AGAG
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          6297  5 +     16677 C--------AGAG
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           28487  5 +     35983 C--------AGAG
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11995018  5 +  12117833 C--------AGAG
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46481994  5 +  46592721 C--------AGAG
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                        111  5 -     27215 C--------AGAG
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       6311  5 +     35577 C--------AGAG
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        6105  5 -     25661 C--------AGAG
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        6277  5 -     17744 C--------AGAG
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        25646  5 +     37128 C--------AGAG
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           4616  5 -      6963 C--------AGAG
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           63212  5 -     68416 C--------AGAG
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                           12318  5 +     13308 C--------AGAG
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             9492  5 -     18223 C--------AGAG
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              1230  5 +    188999 C--------AGAG
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           45529  5 +     57117 C--------AGAG
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          50209  5 +     54541 C--------AGAG
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15964394  5 +  43084221 C--------AGAG
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         75013  5 +    196370 C--------AGAG
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          19194  5 +     40510 C--------AGAG
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15143831  5 -  15256731 C--------AGAG
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      38295  5 -     53260 C--------AGAG
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101148854  5 + 101219884 C--------AGAG
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                18720  5 -     21363 C--------AGTA
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           764024  5 +    964067 C--------AGTA
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Condylura_cristata.JH655880.1                          60622230  5 +  78930452 A--------AGAG
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         2198  5 -      5782 C--------AGAG
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 I 348
s Cricetomys_gambianus.CriGam_scaffold_949                 282682  5 -    399297 C--------AAAG
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53035051  5 +  72327488 C--------AGAG
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              1641  8 -     22648 CAG--C---ACCT
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 I 7
s Cryptoprocta_ferox.CryFer_flattened_line_19014            57533  5 -     70449 G--------AGAG
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  214304  3 -    956709 ----------CAG
i Ctenodactylus_gundi.CteGun_scaffold_447               I 1 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 34332  5 -     67205 C--------AGAG
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                20881  5 +     26546 C--------AGAG
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             62021  5 -    236241 T--------AGAG
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          185694  5 -   6883506 C--------AGAG
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16849147  5 +  31942871 C--------AGAG
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80040661  5 -  96802777 C--------AGAG
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18701224  5 -  18957592 C--------ATAG
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 326258  5 +    993696 C--------AGAG
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   6899  5 +    151128 C--------AGAG
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   159656  5 +    228994 C--------AGAG
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3660374  5 +   4240102 C--------AAAA
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  2728  5 -     11986 C--------AAAA
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                39988  5 -     73477 C--------ACAG
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1496228 13 +   1727528 CAGGGCCTGATAA
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        243844  5 -    369425 C--------AGAG
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Enhydra_lutris.KZ291749.1                              85877501  5 +  99434291 C--------AGAA
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4708981  5 +   6522550 C--------ATAG
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11541349  3 +  16010500 c--------ag--
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48780864  5 -  48907691 C--------AGAG
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          318881  5 +    330699 C--------AGAG
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             65338  5 +     89355 C--------AGAG
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_59549                                394  5 +      1101 C--------AGAG
i Eulemur_albifrons.k141_59549                          I 33 C 0
s Eulemur_collaris.k141_1015201                              2562  5 -      4292 C--------AGAG
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            15695  5 +     36558 C--------AGAG
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            12020  5 +     60246 C--------AGAG
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                15503  5 +    109717 C--------AGAG
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 3488  5 -     19505 C--------AGAG
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                20161  5 +     27497 C--------AGAA
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           22616  5 +     26808 C--------AGAG
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                37351  5 +     46535 C--------AGAG
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              20090  5 -     29447 C--------AGAG
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.AANG03133801.1                                  586  5 -       736 C--------AGAG
i Felis_catus.AANG03133801.1                            C 0 C 0
s Felis_catus_fca126.CM031420.1                         129285942  5 - 158578461 C--------AGAG
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 27041  5 +     52776 C--------AGAG
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13896168  5 -  19261668 C--------AGAG
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     215350  5 -    847004 C--------AGAG
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           17711  5 -     43889 C--------AGAG
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          14856  5 +     27357 C--------AGAG
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               159598  5 +    324696 C--------AGAC
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    186026 13 -    189561 CAGGGCCTGATAG
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           16495  5 -     18683 T--------AGAG
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               9279  5 -     14630 C--------AGAG
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119656379  5 - 195582420 C--------AGAG
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   79812  5 +    118900 T--------AGAG
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 I 7
s Hapalemur_alaotrensis.k141_1280836                         6082  5 +     10286 C--------AGAA
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             4560  5 -     11661 C--------AGAA
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             9887  5 +     56096 C--------AGAA
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        33136  5 -     42470 C--------AGAA
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        49759  5 -     54384 C--------AGAA
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              22671  5 +     53719 G--------AGAG
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                32897 13 -     91191 CAGGGCCTGATAG
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2560659  5 +  31725842 C--------AGAG
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               62894  5 +     73687 C--------AGAG
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              150664  5 +    277961 C--------AGAG
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      283062  5 -    477199 c--------agag
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959                832  5 +     26078 C--------AGAG
i Hipposideros_galeritus.HipGal_scaffold_52959          I 15 C 0
s Hoolock_leuconedys.ctg315                                   350285  5 +    431944 C--------AGAG
i Hoolock_leuconedys.ctg315                                C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 23143  5 -     67322 G--------AGAG
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           21273  5 -    119109 C--------ACAG
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_1816750                             1766  5 +      3202 C--------AGAG
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1633646                              1736  5 -      2102 C--------AGAG
i Hylobates_agilis.k141_1633646                         C 0 C 0
s Hylobates_klossii.k141_468230                              3253  5 +      5464 C--------AGAG
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14628600  5 -  25970782 C--------AGAG
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            1152  5 +      4161 C--------AGAG
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             37462  5 -     60944 C--------AGAG
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     9566  5 +     22540 C--------AGAG
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7130403  5 +  13083262 C--------ACAG
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   1609  5 +      3484 T--------AGGG
i Indri_indri.k141_2197838                              I 50 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              12873  5 +     17520 C--------AGAG
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               27492  5 +     37189 C--------AGAG
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          54049  5 -    147782 C--------AGAG
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    5593  5 +     26176 C--------ATAG
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258411434  5 - 285822530 C--------AGAA
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        28749  5 +     39228 C--------AGAG
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            58113  5 +     63517 C--------AGAG
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        36493  5 -     38897 C--------AGAG
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      2539  5 -     13103 C--------AGAG
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3091477  5 -   3498232 C--------AGAA
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    20900  4 +     22452 C--------A-AG
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            139807  5 +   3060487 C--------AGAG
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19252485  5 +  19376315 C--------AGAG
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           15301  5 +     84689 C--------AGAG
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3783040  5 +   6799190 C--------AGAG
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20598824  5 -  62548349 C--------GGAG
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11095230  5 +  39895028 C--------AGAG
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             24236  5 +     74745 C--------AGAG
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12710697  5 +  12821369 C--------AGAG
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                3270  5 -     26467 C--------AGAG
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           51141  5 +     63263 C--------AGAG
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 3251  5 -     26361 C--------AGAG
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 6441  5 -      7381 C--------AGAG
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  49670  5 -     79256 C--------AGAG
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196039768  5 + 196197964 C--------AGAG
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11449938  5 +  11645122 C--------AGAG
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   8624  5 -     46448 C--------AGAG
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                6287  5 -     13212 C--------AGAG
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 19967  5 -     55006 C--------AGAG
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43845082  5 +  43892939 C--------AGAG
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               21251  5 -     24607 C--------AGAG
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               8621  5 -     27140 C--------AGAG
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43441657  5 -  43563597 C--------AGAG
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4454461  5 -   4543643 C--------AGAG
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            152204  1 +    252755 ------------G
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             39794  1 +     58827 ------------G
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36878275  5 +  64221397 C--------ACAG
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       65628  5 -    234502 C--------AGGG
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             6393  5 -     87323 C--------AGAA
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 1299  5 +    115071 C--------ATCC
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1051572  5 -  26018355 C--------AGAG
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    2464  5 -     12939 C--------AGAG
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16514492  5 +  47401472 C--------AAAG
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               24971  5 -     32043 C--------ATAG
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22824648  5 -  98408828 C--------AGAG
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8213030  5 +  10048721 C--------ACAG
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            37519  5 +     45743 C--------ACAG
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         6203  5 +     29742 C--------AGAG
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        16973  5 -    104932 C--------AGAA
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     5175  5 -     12809 C--------AGAG
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 150254  5 +    154973 C--------AGAG
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                163509  5 +    265003 C--------ATAG
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  6246 13 -     19904 CAGGGCCTGATAG
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  150346  5 -    168139 G--------AGAG
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          24443  5 -    100666 C--------ATAG
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70771869  5 +  92629107 C--------AAAG
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75493923  5 +  98207768 C--------AAAG
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67560675  5 +  89017189 C--------AGAG
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74336649  5 +  97876770 C--------AAAG
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             14898  5 +     98495 T--------AGAG
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4428232  5 -  28371801 C--------AGAA
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     93865  5 -    117718 C--------AGAG
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               971315  5 +   8389877 C--------ATAG
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5022736  5 +   6462685 C--------ATAG
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3468819  5 -   3747815 C--------ATAG
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        14060  5 +     66751 C--------ATAG
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             7669  5 -      8794 C--------AATA
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            120401  5 +    362372 C--------AGAG
i Nannospalax_galili.KL201303.1                         C 0 I 14
s Neomonachus_schauinslandi.NINY01007774.1                4490371  5 -  14209539 C--------AGAA
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3954845  5 -   4490290 C--------AGAG
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  50568  5 +     94413 C--------CTAG
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_762468                             271  5 -      2755 C--------AGAG
i Nomascus_annamensis.k141_762468                       C 0 C 0
s Nomascus_concolor.k141_70405                                891  5 +      1153 C--------AGAG
i Nomascus_concolor.k141_70405                          C 0 C 0
s Nomascus_gabriellae.k141_1400361                            822  5 -      2203 C--------AGAG
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_1022                            1678  5 -     11638 C--------AGAG
i Nomascus_siki_b.tarseq_1022                       I 846 C 0
s Nomascus_siki_a.k141_421408                                   736  5 +     16235 C--------AGAG
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                38095  5 +   3668941 C--------AGAG
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65571976  5 -  95554990 C--------AGAG
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_771591                            15386  5 +     16181 C--------AGAG
i Nycticebus_coucang.k141_771591                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65680164  5 +  89412551 c--------agaG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Octodon_degus.JH651621.1                                3689324  5 +  10294119 c--------agag
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             685074  5 -   3126709 C--------AGAA
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1083678 13 +   1425656 CAGGGCCTGATAG
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         41760 13 +     78940 CAGGACCTGATAG
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  130444  5 +    145789 C--------AGAG
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  43140  5 +     62360 C--------AGAG
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7228519  5 -   7562323 C--------AGAG
i Orcinus_orca.KB316965.1                               C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141883915  4 + 163896628 c--------A-AG
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      315233  5 -    505867 C--------AGAG
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        5212  5 -     53940 C--------AGAG
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18013185  5 -  38779656 C--------AGAA
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134082683 13 - 275406953 CAGGGCCTGATAG
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      83917 13 +    140051 CAGGGCCTGATAG
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127578558  5 - 205426864 C--------AGAG
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120155718  5 - 196562556 C--------AGAG
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  39961  5 +    295523 C--------AGAG
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3643776  5 +  18214204 C--------AGAG
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5033424  5 -   6340057 C--------AGAG
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1071559 13 -   1292953 CAGGGCCCGATAG
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188160446  5 - 188283584 C--------AGAG
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              3536  5 +     25005 C--------AGAG
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47517818  5 +  47705337 C--------AGAG
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 71809  5 -    104429 C--------AGAG
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   10341  5 +     14967 C--------AGAG
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 6206  5 -      7628 C--------AGAG
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    121448  5 -    135482 G--------AGAG
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          10877  5 -     23713 C--------AGAA
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           12017  5 +     61070 C--------AGAA
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       2291  5 +     49596 C--------AGAG
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4955504  5 -   8017169 C--------AGAG
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    17346  5 -     36578 C--------ACAG
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              2986  5 +      8220 C--------AGAG
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            99606  5 +    112873 C--------ATAG
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           9457  5 +     21690 C--------AGAG
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       26141  5 +     44506 C--------AGAG
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        26354  5 +     67491 C--------AGAG
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      16593  5 -     98129 C--------AGAG
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     26194  5 +    147771 C--------AGAG
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         2829  5 -     43940 C--------AGAG
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          6912  5 -     55515 C--------AGAG
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         26266  5 +    152463 C--------AGAG
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       4074  5 -    119457 C--------AGAG
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         15989  5 +    134592 C--------AGAG
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          26576  5 -     75465 C--------AGAG
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              191189  5 -    373494 C--------AGAG
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19811836  5 +  19899266 C--------AGAG
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                3999  5 -      9567 C--------AGAG
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6852808  5 +  12164890 C--------AGAA
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coronatus.k141_1353159                         7894  5 +     11805 C--------AGGG
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           47229  5 +     52369 C--------AGAG
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         39616  5 -     44753 C--------AGAG
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            21539  5 +     27322 C--------AGAG
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       21187  5 -     53241 C--------AGGG
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         43450  5 -     48185 C--------AGGG
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           38294  5 +     77221 C--------ATTG
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            6153  5 -     27784 C--------ACAG
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        250361  5 -    344369 C--------AGAA
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Puma_concolor.QAVW01000427.1                          131540072  5 - 161321710 C--------AGAG
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                20542 13 +     68503 CAGGGCCTGATAG
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13917705  5 +  90463843 c--------agaG
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1792664  5 +   2252614 C--------AGAG
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                       952 13 -      4338 CAGGGCCTGATAG
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15676597  5 -  43202129 C--------AAAG
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        8510  5 +     34089 C--------AAAG
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              8450  5 -     60842 C--------AAAG
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              8544  5 +     67014 C--------AAAG
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              8521  5 +     60816 C--------AAAG
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 8458  5 -     76454 C--------AAAG
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17345244  5 -  30362882 C--------AAAG
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         24565  5 -     62485 C--------AAAG
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   39683  5 -    114521 C--------AGAG
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  105504  5 -    120886 c--------aGAG
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            23608  5 +    739146 C--------ACAG
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 I 6
s Sorex_araneus.JH798170.1                               17770060  8 -  27805282 TAGG-----NNNN
i Sorex_araneus.JH798170.1                              C 0 I 7
s Spermophilus_dauricus.KZ294190.1                        2244107  5 +   2842873 C--------ACAG
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             238875  5 -    276980 A--------AGAA
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            33263  5 +     62062 G--------AGAG
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189275048  5 + 218635234 C--------AGAG
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        18859  5 -  13920577 C--------AGAG
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                2380  5 +     20549 C--------ATAG
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               17342  5 +     45698 C--------AATA
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      810844  5 +   1148477 C--------AGAT
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  61486  5 +     99546 C--------AGAG
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194011979  5 - 194193292 C--------AGAG
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                   453  5 -      3104 C--------AAAG
i Tolypeutes_matacus.TolMat_scaffold_475685             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  138147  5 -    259118 C--------ATAG
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trichechus_manatus.JH594618.1                          16089903  5 +  31416278 C--------AGAG
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2797813  5 -   3938065 C--------AGAG
i Tupaia_chinensis.KB320831.1                           C 0 T 2433
s Tupaia_tana.TupTan_flattened_line_68454                    9748  5 +     13056 C--------AGAG
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69317248  5 -  96451834 C--------AGAG
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                     150  5 +    136657 C--------AGAG
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 C 0
s Ursus_maritimus.KK498671.1                              6520777  5 +  28682327 C--------AGAA
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  9451  5 -     20643 C--------AGAG
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             28986  5 -     33872 C--------AGAG
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1528288  5 -   2331223 C--------AGAG
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                144460  5 -    281493 C--------AGAG
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       131603  5 -    134049 C--------ACAG
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        219930  5 -    227762 C--------AGAA
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            1996  5 -     13665 C--------AGAG
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Ochotona_princeps.JH802095.1                            4999348 675 -  23139505 I
e Chrysochloris_asiatica.ChrAsi_scaffold_629495              2285  5 -      3120 I
e Tragulus_javanicus.TraJav_scaffold_14717                   9488 743 +     90398 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Orycteropus_afer.OryAfe_flattened_line_13509              64285  2 -     66828 I
e Microgale_talazaci.MicTal_scaffold_34660                  41511  5 -     48017 I
e Equus_przewalskii.ATBW01073585.1                          16581  0 +     92910 C
e Equus_caballus.CM000402.2                              13355091  0 +  41866177 C
e Equus_asinus.JREZ01000062.1                             5856591  0 -   7175178 C
e Elephantulus_edwardii.JH947210.1                        7833017 10 +  15467074 I
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Echinops_telfairi.JH980316.1                           22999940  2 -  44670279 I
e Zapus_hudsonius.ZapHud_scaffold_256618                      408  0 -      2259 C
e Jaculus_jaculus.JH725517.1                              8577673  0 +  11848649 C
e Allactaga_bullata.AllBul_scaffold_141108                    666  0 -      7259 C
e Trachypithecus_pileatus.k141_1022309                       5226  0 +     13828 C
e Trachypithecus_phayrei.ctg3                            44662914  0 -  44834318 C
e Trachypithecus_obscurus.k141_1115109                       8130  0 -     28054 C
e Trachypithecus_melamera.k141_699241                        2986  0 -     24393 C
e Trachypithecus_leucocephalus.k141_381681                   3005  0 +     12481 C
e Trachypithecus_laotum.k141_760702                          4719  0 +     14371 C
e Trachypithecus_hatinhensis.k141_504423                     6067  0 -     15592 C
e Trachypithecus_germaini.k141_868450                        3883  0 -     11566 C
e Trachypithecus_geei.k141_670367                           46082  0 -     54611 C
e Trachypithecus_francoisi.k141_768164                       4689  0 -     14244 C
e Trachypithecus_cristatus.k141_1011511                      5261  0 -     12939 C
e Trachypithecus_crepusculus.k141_1588528                   23360  0 -     32910 C
e Trachypithecus_auratus.k141_738098                        29800  0 +     38948 C
e Tarsius_wallacei.k141_48636                               64696  0 +     65473 C
e Tarsius_lariang.k141_609102                               31387  0 +     42269 C
e Semnopithecus_vetulus.k141_1143185                        16479  0 +     30600 C
e Semnopithecus_schistaceus.k141_387461                     33457  0 +     42640 C
e Semnopithecus_priam.k141_410937                           40312  0 +     46263 C
e Semnopithecus_johnii.k141_785014                         121532  0 +    130994 C
e Semnopithecus_hypoleucos.k141_761524                      11528  0 +     20762 C
e Semnopithecus_entellus.k141_1572367                        6153  0 +     15331 C
e Rhinopithecus_strykeri.ctg4                            44859307  0 -  45163003 C
e Rhinopithecus_bieti.k119_554384                            2917  0 -     17045 C
e Pygathrix_nigripes_a.k141_101123                             8537  0 +     18040 C
e Pygathrix_nigripes_b.ctg79                                 6809148  0 +   6970761 C
e Pygathrix_cinerea.k141_374971                             32651  0 +     56732 C
e Propithecus_coquerelli.NW_012147863.1                     21633  0 -     30946 C
e Presbytis_mitrata.k141_860013                              8661  0 +     14865 C
e Presbytis_comata.k141_672698                               8546  0 -     15069 C
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000036.1               26743271  0 +  26888534 C
e Piliocolobus_kirkii.k141_929665                            4788  0 +      7694 C
e Piliocolobus_gordonorum.k141_1270531                       5421  0 -     17985 C
e Piliocolobus_badius.k141_1987485                           4802  0 -      5908 C
e Nasalis_larvatus.k141_153429                              11264  0 +     48152 C
e Colobus_polykomos.k141_1406057                            19335  0 +     23629 C
e Colobus_guereza.LG08                                  147667351  0 + 156195979 C
e Colobus_angolensis.KN985967.1                          10889423  0 +  10971483 C
e Cephalopachus_bancanus.k141_702587                        12545  0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530  0 +    345090 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               17587 68 +    209709 C-CTGATA-T------TA----A-TGAT----TCG-T-GAAA-----CTCATTA--AA---------TGC-AGTTATGCA--TCTGATTTG-AAA-A-TCA-T----------------------------GAGGG---G--------G
s Acinonyx_jubatus.LLWD01000356.1                         2039552 63 +   3721120 G-CTGAAA-T------TG----A----T----TCA-T-GT-AAC-T-CTTATTA--AA---------TGT-AACTGTGCA--CATGATTTG-GGA-A-TCA-T----------------------------GAG---------------
i Acinonyx_jubatus.LLWD01000356.1                       C 0 I 4
s Acomys_cahirinus.AcoCah_scaffold_1625                    117812 70 -    189883 C-CTGACT-T------TG----A-TGGT----TCA-T-CAGA-C-C-ATTATCA--CT---------TGC-AGCTGTACA--TCTGACTTG-AGA-A-TGA-T----------------------------GTG--TG-T--------G
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10663509 63 +  23371972 C-CTGATA-T------TG----A----T----TCA-T-GT-AAC-T-CTTATTA--AA---------TGT-AGCTGTGCA--TATGATTTG-GGA-A-TCA-T----------------------------GAG---------------
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 I 7
s Ailurus_fulgens.LNAC01000003.1                          7100044 61 -  16596857 C-CTGATA-C------TG----A----T----TCA-T-GT-AA----CTCATTA--GA---------TGT-AGCTGTGCA--TATGATTTG-GGA-A-TTA-T----------------------------GAG---------------
i Ailurus_fulgens.LNAC01000003.1                        C 0 I 7
s Allenopithecus_nigroviridis.k141_2469532                   5460 68 -     60446 C-CTGATA-T------TA----A-TGAT----TCA-C-GAAA-----CTCATTA--AA---------TGC-AGTTGTGCA--TGTGATTTG-AAA-A-TCA-G----------------------------GAGGG---A--------G
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         6177 68 -     29318 C-CTGATA-T------TA----A-TGAT----TCA-C-GAAA-----CTCATTA--AA---------TGC-AGTTGTGCA--TGTGATTTG-AAA-A-TCA-G----------------------------GAGGG---A--------G
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         5115 68 +     38766 C-CTGATA-T------TA----A-TGAT----TCA-C-GAAA-----CTCATTA--AA---------TGC-AGTTGTGTA--TGTGATTTG-AAA-A-TCA-G----------------------------GAGGC---A--------G
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          6071 68 -     80423 C-CTGATA-T------TA----A-TGAT----TCA-C-GAAA-----CTCATTA--AA---------TGC-AGTTGTGCA--TGTGATTTG-AAA-A-TCA-G----------------------------GAGGG---A--------G
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              1044 68 +     19852 C-CTGATA-T------TA----A-TGAT----TCA-T-GAAA-----CTCATTA--AA---------TGC-AGTTGTGCA--TCTGATTTG-AAA-A-TCA-T----------------------------GAGGG---A--------G
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                3299 68 -     12443 C-CTGATA-T------TA----A-TGAT----TCA-T-GAAA-----CTCATTA--AA---------TGC-AGTTGTGCA--TCTGATTTG-AAA-A-TCA-T----------------------------GAGGG---A--------G
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                              598 68 +      5070 C-CTGATA-T------TA----A-TGAT----TCA-T-GAAA-----CTCATTA--AA---------TGC-AGTTGTGCA--TCTGATTTG-AAA-A-TCA-T----------------------------GAGGG---A--------G
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                  343 68 -      1641 T-CTGATA-T------TA----A-TGAT----TCA-T-GAAA-----CTCATTA--AA---------TGC-AGTTGTGCA--TCTGATTTG-AAA-A-TCA-T----------------------------GAGGG---A--------G
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          3082 68 -     24210 C-CTGATA-T------TA----A-TGAT----TCA-T-GAAA-----CTCATTA--AA---------TGC-AGTTGTGCA--TCTGATTTG-AAA-A-TCA-T----------------------------GAGGG---A--------G
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           29664 68 -     30219 C-CTGATA-T------TA----A-TGAT----TCA-T-GAAA-----CTCATTA--AA---------TGC-AGTTGTGCA--TCTGATTTG-AAA-A-TCA-T----------------------------GAGGG---A--------G
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_405616                              5500 68 +     16794 C-CTGATA-T------TA----A-TGAT----TCA-T-GAAA-----CTCATTA--AA---------TGC-AGTTGTGCA--TCTGATTTG-AAA-A-TCA-T----------------------------GAGGG---A--------G
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                             632 68 -      1470 T-CTGATA-T------TA----A-TGAT----TCA-T-GAAA-----CTCATTA--AA---------TGC-AGTTGTGCA--TCTGATTTG-AAA-A-TCA-T----------------------------GAGGG---A--------G
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             4777 68 -      9835 T-CTGATA-T------TA----A-TGAT----TCA-T-GAAA-----CTCATGA--AA---------TGC-AGTTGTGCA--TCTGATTTG-AAA-A-TCA-T----------------------------GAGGG---A--------G
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3525563 63 +   4113121 C-CCAATA-T------TA----A-TGAC----TCA-T-GT-AAC-T----ATTA--AA---------TGC-AGCTGTACA--TATGATTTG-GGA-A-TCA-T----------------------------GAG---------------
i Ammotragus_lervia.NIVO01013474.1                      C 0 I 2
s Anoura_caudifer.AnoCau_scaffold_422                      392595 65 -    631301 T-CTGATA-T------CA----A-TGAC----TCA-TTGA-G-C-T-CTTCTGA--AG---------TGC-AGCTGTGCA---ATAATTTG-GGG-A-TCA-T----------------------------GAG---------------
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 I 2
s Antilocapra_americana.AntAmePen_scaffold_27338             2994 63 +     55446 C-CCAATA-T------TA----A-TGAT----TCA-T-GT-AAT-T----ATTA--AA---------TGC-AGCTGTACA--TACAATTGG-GGA-A-TCA-T----------------------------GAG---------------
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 I 2
s Aotus_azarae.k141_3170768                                 66390 68 +     78111 C-CTGATA-T------TA----A-TGAT----TCA-T-GAAA-----CTCATTA--AA---------TGC-AGTTGTGCA--TCTGATTTG--AA-AATCA-T----------------------------GAGGG---A--------G
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            9336 68 +     22701 C-CTGATA-T------TA----A-TGAT----TCA-T-GAAA-----CTCATTA--AA---------TGC-AGTTGTGCA--TCTGATTTG--AA-AATCA-T----------------------------GAGGG---A--------G
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5753294 68 +   9889416 C-CTGATA-T------TA----A-TGAT----TCA-T-GAAA-----CTCATTA--AA---------TGC-AGTTGTGCA--TCTGATTTG--AA-AATCA-T----------------------------GAGGG---A--------G
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             9892 68 -    104377 C-CTGATA-T------TA----A-TCAT----TCA-T-GAAA-----CTCATTA--AA---------TGC-AGTTGTGCA--TCTGATTTG--AA-AATCA-T----------------------------GAGGG---A--------G
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               9899 68 +     23246 C-CTGATA-T------TA----A-TCAT----TCA-T-GAAA-----CTCATTA--AA---------TGC-AGTTGTGCA--TCTGATTTG--AA-AATCA-T----------------------------GAGGG---A--------G
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     2428 66 +     11424 T-CTGGTA-T------TA----A-TGAT----TCA-T-GGCA-T-T-CT---CA--AA---------TGC-AGTTGAGCA--TCTGATTTG-GAA-A-TCA-T----------------------------GAG--AG-T---------
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        6508 68 +      9265 C-TGGATA-T------TC----A-TGGT----CCA-T-GGAA-C-T-CTTATGA--AA---------TAC-CACTGTACA--TCTGAATTG-GGA-A-TCA-T----------------------------GAG-----T--------G
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                11020 65 -     29036 T-CTGATA-T------CA----A-TGAT----TCA-TTGA-G-C-T-CATATGA--AG---------TGC-AGCTGTGCA---ATAATTTG-GGG-A-TCA-T----------------------------GAG---------------
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 I 2
s Ateles_geoffroyi_b.tarseq_2582                             9543186 67 +  39197703 C-CTGATA-T------TA----A-TGAT----TCA-T-GAAA------TCATTA--AA---------TGC-AGTTATGCA--TCTGTTTTG-AGA-A-TCA-T----------------------------GAGGG---A--------T
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             64459 68 +     85812 C-CTGATA-T------TA----A-TGAT----TCA-T-GAAA-----CTCATTA--AA---------TGC-AGTTATGCA--TCTGATTTG-AGA-A-TCA-T----------------------------GAGGG---A--------T
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                15472 68 +     89302 C-CTGATA-T------TA----A-TGAT----TCA-T-GAAA-----CTCATTA--AA---------TGC-AGTTATGCA--TCTGATTTG-AGA-A-TCA-T----------------------------GAGGG---A--------T
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             19973 68 -     58268 C-CTGATA-T------TA----A-TGAT----TCA-T-GAAA-----CTCATTA--AA---------TGC-AGTTATGCA--TCTGTTTTG-AGA-A-TCA-T----------------------------GAGGG---A--------T
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             67967 68 +    119057 C-CTGATA-T------TA----A-TGAT----TCA-T-GAAA-----CTCATTA--AA---------TGC-AGTTATGCA--TCTGATTTG-AGA-A-TCA-T----------------------------GAGGG---A--------T
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                               9936 68 -     25888 C-CTGATA-T------TA----A-TGAT----TCA-T-GAAA-----CTCATTA--AA---------TGC-AGTTATGCA--TCTGATTTG-AGA-A-TCA-T----------------------------GAGGG---A--------T
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                10992 68 -     16375 T-CTGATG-T------TA----A-TGAT----TCA-T-GGAA-C-T-CTCATTA--AA---------TGC-CTTTGTGCA--TCTGATTTG-GGG-A-TCA-T----------------------------GAG-----A--------G
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               4608 68 +      6337 T-CTGATG-T------TA----A-TGAT----TCA-T-GGAA-C-T-CTCATTA--AA---------TGC-CTTTGTGCA--TCTGATTTG-GGG-A-TCG-T----------------------------GAG-----A--------G
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26384043 67 +  51448160 C-CTGATANT------TA----A-TGAT----TCA-T-GT-AAC-T-CTCATTA--AA---------TGC-AGCTGTACA--TACGATTTG-GGA-A-CCA-T----------------------------GAG---------------
i Balaenoptera_acutorostrata.KI537095.1                 C 0 I 2
s Balaenoptera_bonaerensis.DF502048.1                        9216 67 -     13118 C-CTGATANT------TA----A-TGAT----TCA-T-GT-AAC-T-CTCATTA--AA---------TGC-AGCTGTACA--TACGATTTG-GGA-A-CCA-T----------------------------GAG---------------
i Balaenoptera_bonaerensis.DF502048.1                   C 0 I 2
s Beatragus_hunteri.BeaHun_scaffold_21644                   48025 63 -     72089 C-CCAAAA-T------TA----A-TGAC----TCA-T-GT-TAC-T----ATTA--AA---------TGC-AGCTGTACA--TATGATTTG-GGA-A-TCA-T----------------------------GAG---------------
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 I 2
s Bison_bison.KN264915.1                                   302169 63 -   6870073 C-CCAATA-T------TA----A-TGAT----TCA-T-GT-AAC-T----ATTA--AA---------TGC-AGCTGTACA--TATGATTTG-GGA-A-TCA-T----------------------------GAG---------------
i Bison_bison.KN264915.1                                C 0 I 2
s Bos_indicus.CM003021.1                                 22956267 63 + 161108492 C-CCAATA-T------TA----A-TGAT----TCA-T-GT-AAC-T----ATTA--AA---------TGC-AGCTGTACA--TATGATTTG-GGA-A-TCA-T----------------------------GAG---------------
i Bos_indicus.CM003021.1                                C 0 I 2
s Bos_mutus.JH883513.1                                     418532 63 +    998990 C-CCAATA-T------TA----A-TGAT----TCA-T-GT-AAA-T----ATTA--AA---------TGC-AGCTGTACA--TATGATTTG-GGA-A-TCA-T----------------------------GAG---------------
i Bos_mutus.JH883513.1                                  C 0 I 2
s Bos_taurus.CM000177.6                                  22664921 63 + 158972876 C-CCAATA-T------TA----A-TGAT----TCA-T-GT-AAC-T----ATTA--AA---------TGC-AGCTGTACA--TATGATTTG-GGA-A-TCA-T----------------------------GAG---------------
i Bos_taurus.CM000177.6                                 C 0 I 2
s Bubalus_bubalis.KI419065.1                               674685 63 +   1914593 C-CCAATA-T------TA----A-TGAT----TCA-T-GT-AAC-T----ATTA--AA---------TGC-AGCTGTACA--TATGATTTG-GGA-A-TCA-T----------------------------GAG---------------
i Bubalus_bubalis.KI419065.1                            C 0 I 2
s Cacajao_ayresi.k141_724503                               117839 68 -    171031 C-CCAATA-T------TA----A-TGAT----TCC-T-GAAA-----CTCATGA--AA---------TGC-AGTTGTGCA--TCTGATTTG-AAA-A-TCA-T----------------------------GAGGG---A--------G
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 16859 68 +    125063 C-CCAATA-T------TA----A-TGAT----TCC-T-GAAA-----CTCATGA--AA---------TGC-AGTTGTGCA--TCTGATTTG-AAA-A-TCA-T----------------------------GAGGG---A--------G
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                18906 68 -    216513 C-CCAATA-T------TA----A-TGAT----TCC-T-GAAA-----CTCATGA--AA---------TGC-AGTTGTGCA--TCTGATTTG-AAA-A-TCA-T----------------------------GAGGG---A--------G
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       11449 68 -    134917 C-CCAATA-T------TA----A-TGAT----TCC-T-GAAA-----CTCATGA--AA---------TGC-AGTTGTGCA--TCTGATTTG-AAA-A-TCA-T----------------------------GAGGG---A--------G
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3223185 65 -   8989139 C-CTGATA-T------AA----A-TGAT----TCA-T-GT-AAT-T-CTCATTA--AA----------AC-AGCTGTGCA--TATAATTTG-GGA-C-TCA-T----------------------------GAG---------------
i Camelus_bactrianus.KN276303.1                         C 0 I 2
s Camelus_dromedarius.KN271192.1                           400886 65 -  15254737 C-CTGATA-T------AA----A-TGAT----TCA-T-GT-AAT-T-CTCATTA--AA----------AC-AGCTGTGCA--TATAATTTG-GGA-C-TCA-T----------------------------GAG---------------
i Camelus_dromedarius.KN271192.1                        C 0 I 2
s Camelus_ferus.KB016973.1                                2976623 65 +   6889770 C-CTGATA-T------AA----A-TGAT----TCA-T-GT-AAT-T-CTCATTA--AA----------AC-AGCTGTGCA--TATAATTTG-GGA-C-TCA-T----------------------------GAG---------------
i Camelus_ferus.KB016973.1                              C 0 I 2
s CanFam4.chr31                                          11526385 63 +  39901454 C-CTGATA-T------TG----A----T----TCA-T-GT-AAC-T-CTTATTA--AA---------TGT-AGCCGTGCA--TATGATTTG-GGA-A-TCA-T----------------------------GAG---------------
i CanFam4.chr31                                         C 0 I 4
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   21359 63 +     87036 C-CTGATA-C------TG----A----T----TCA-T-GT-AAC-T-CTTATTA--AA---------TGT-AGCCGTGCA--TATGATTTG-GGA-A-TCA-T----------------------------GAG---------------
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 I 4
s Canis_lupus_dingo.QKWQ01001993.1                       11273068 63 -  35597290 C-CTGATA-T------TG----A----T----TCA-T-GT-AAC-T-CTTATTA--AA---------TGT-AGCCGTGCA--TATGATTTG-GGA-A-TCA-T----------------------------GAG---------------
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 I 4
s Canis_lupus_familiaris.chr31                           11095779 63 +  39895921 C-CTGATA-C------TG----A----T----TCA-T-GT-AAC-T-CTTATTA--AA---------TGT-AGCCGTGCA--TATGATTTG-GGA-A-TCA-T----------------------------GAG---------------
i Canis_lupus_familiaris.chr31                          C 0 I 4
s Canis_lupus_orion.HG994411.1                           16462564 63 -  44759192 C-CTGATA-C------TG----A----T----TCA-T-GT-AAC-T-CTTATTA--AA---------TGT-AGCCGTGCA--TATGATTTG-GGA-A-TCA-T----------------------------GAG---------------
i Canis_lupus_orion.HG994411.1                          C 0 I 4
s Capra_aegagrus.CM003214.1                              21333505 63 + 157394656 C-CCAATA-T------TA----A-TGAT----TCA-T-GT-AAC-T----ATTA--AA---------TGC-AACTGTACA--TATGATTCG-GGA-A-TCA-T----------------------------GAG---------------
i Capra_aegagrus.CM003214.1                             C 0 I 2
s Capra_hircus.CM004562.1                               135711860 63 - 157403528 C-CCAATA-T------TA----A-TGAT----TCA-T-GT-AAC-T----ATTA--AA---------TGC-AACTGTACA--TATGATTCA-GGA-A-TCA-T----------------------------GAG---------------
i Capra_hircus.CM004562.1                               C 0 I 2
s Capromys_pilorides.CapPil_scaffold_529800                   246 68 -      2320 G-CTGCTA-T------TA----A-TGAT----TGG-T-GGCC---TGCTCATCA--GA---------GGT-AGCTGTT----GCCATCTCA-AAA-C-ATG-T----------------------------GAA---GGA--------G
i Capromys_pilorides.CapPil_scaffold_529800             C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               62013 65 +     67245 T-CTGATA-T------CA----A-TGAT----TCA-TTGA-G-C-T-TTTATGA--AG---------TGC-AGCTGTGCA---ATAATTTG-GGG-A-TCA-T----------------------------GAG---------------
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 I 2
s Castor_canadensis.CasCan_scaffold_417865                    217 70 -       402 A-CTGATG-T------GA----A-TGAT----TCA-T-GGCA-C-T-ATCATCA--AA---------TGC-CATTATGCA--TCTGATTTG-AGA-A-TTG-T----------------------------GAG---GGA--------G
i Castor_canadensis.CasCan_scaffold_417865              C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   162699 61 -    276539 A-ATGACA-T------TA----A-CGAT----TCA-T-GT-A---G---CATTA--AA---------CAC-AACTGTGCA--TATGATTTG-GGA-C-TTA-A----------------------------G-G---------------
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 I 2
s Cavia_aperea.AVPZ01000278.1                            15789714 68 -  24422027 G-CTAATA-T------TA----A-TGAT----TCA-T-GGCC-C-T-TTCAGAA--AA---------TGT-AGTTGTT----TCTGATTTG-AAA-A-TTG-T----------------------------AAG---GGA--------G
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15801653 68 -  24440124 G-CTAATA-T------TA----A-TGAT----TCA-T-GGCC-C-T-TTCAGAA--AA---------TGT-AGTTGTT----TCTGATTTG-AAA-A-TTG-T----------------------------AAG---GGA--------G
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       179825 68 +    436027 G-CTAATA-T------TA----A-TGAT----TCA-T-GGCC-C-T-TTCAGAA--AA---------TGT-AGTTGTT----TCTGATTTG-AAA-A-TTG-T----------------------------AAG---GGA--------G
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18895561 67 -  29618158 C-CTGATA-T------TA----A-TGAT----TCA-T-GAAA-----CTCATTA--AA---------TGC-AGTTGTGCA--TCTGATTTG--AA-A-TCA-T----------------------------GAGGG---A--------G
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                12211 67 -     26817 C-CTGATA-T------TA----A-TGAT----TCA-T-GAAA-----CTCATTA--AA---------TGC-AGTTGTGCA--TCTGATTTG--AA-A-TCA-T----------------------------GAGGG---A--------G
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                16455 67 +     25043 C-CTGATA-T------TA----A-TGAT----TCA-T-GAAA-----CTCATTA--AA---------TGC-AGTTGTGCA--TCTGATTTG--AA-A-TCA-T----------------------------GAGGG---A--------G
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4367616 64 +   7569818 C-CTGATA-G------TA----A-TGAT----TCA-T-GT-AA----CTCATTA--AA---------TGC-AGCTGTGCA--TATGATTTG-AGA-A-TCA-T----------------------------GAG---------------
i Ceratotherium_simum.JH767818.1                        C 0 I 4
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         7373 64 -      9338 C-CTGATA-T------TA----A-TGAT----TCA-T-GT-AA----CTCATTA--AA---------TGC-AGCTGTGCA--TATGATTTG-AGA-A-TCA-T----------------------------GAG---------------
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 I 4
s Cercocebus_atys.KQ010443.1                              6559401 68 +   6739814 C-CTGATA-T------TA----A-TGAT----TCA-T-GAAA-----CTCGTTA--AA---------TGC-AGTTGTGCA--TGTGATTCG-AAA-A-TCA-G----------------------------GAGGG---A--------G
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      30878 68 +     60454 C-CTGATA-T------TA----A-TGAT----TCA-T-GAAA-----CTCGTTA--AA---------TGC-AGTTGTGCA--TGTGATTCG-AAA-A-TCA-G----------------------------GAGGG---A--------G
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          6082 68 -     21101 C-CTGATA-T------TA----A-TGAT----TCA-T-GAAA-----CTCGTTA--AA---------TGC-AGTTGTGCA--TGTGATTCG-AAA-A-TCA-G----------------------------GAGGG---A--------G
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         63392 68 -    107033 C-CTGATA-T------TA----A-TGAT----TCA-T-GAAA-----CTCGTTA--AA---------TGC-AGTTGTGCA--TGTGATTCG-AAA-A-TCA-G----------------------------GAGGG---A--------G
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        6255 68 -     17608 C-CTGATA-T------TA----A-TGAT----TCA-C-GAAA-----CTCATTA--AA---------TGC-AGTTGTGCA--TGTGATTTG-AAA-A-TCA-G----------------------------GAGGG---A--------G
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          3420 68 +     45019 C-CTGATA-T------TA----A-TGAT----TCA-C-GAAA-----CTCATTA--AA---------TGC-AGTTGTGCA--TGTGATTTG-AAA-A-TCA-G----------------------------GAGGG---A--------G
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           3696 68 +     15177 C-CTGATA-T------TA----A-TGAT----TCA-C-GAAA-----CTCATTA--AA---------TGC-AGTTGTGCA--TGTGATTTG-AAA-A-TCA-G----------------------------GAGGG---A--------G
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          6302 68 +     16677 C-CTGATA-T------TA----A-TGAT----TCA-C-GAAA-----CTCATTA--AA---------TGC-AGTTGTGCA--TGTGATTTG-AAA-A-TCA-G----------------------------GAGGG---A--------G
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           28492 68 +     35983 C-CTGATA-T------TA----A-TGAT----TCA-C-GAAA-----CTCATTA--AA---------TGC-AGTTGTGCA--TGTGATTTG-AAA-A-TCA-G----------------------------GAGGG---A--------G
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11995023 68 +  12117833 C-CTGATA-T------TA----A-TGAT----TCA-C-GAAA-----CTCATTA--AA---------TGC-AGTTGTGCA--TGTGATTTG-AAA-A-TCA-G----------------------------GAGGG---A--------G
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46481999 68 +  46592721 C-CTGATA-T------TA----A-TGAT----TCA-C-GAAA-----CTCATTA--AA---------TGC-AGTTGTGCA--TGTGATTTG-AAA-A-TCA-G----------------------------GAGGG---A--------G
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                        116 68 -     27215 C-CTGATA-T------TA----A-TGAT----TCA-C-GAAA-----CTCATTA--AA---------TGC-AGTTGTGCA--TGTGATTTG-AAA-C-TCA-G----------------------------GAGGG---A--------G
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       6316 68 +     35577 C-CTGATA-T------TA----A-TGAT----TCA-C-GAAA-----CTCATTA--AA---------TGC-AGTTGTGCA--TGTGATTTG-AAA-A-TCA-G----------------------------GAGGG---A--------G
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        6110 68 -     25661 C-CTGATA-T------TA----A-TGAT----TCA-T-GAAA-----CTCATTA--AA---------TGC-AGTTGTGCA--TGTGATTTG-AAA-G-TCA-G----------------------------GAGGG---A--------G
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        6282 68 -     17744 C-CTGATA-T------TA----A-TGAT----TCA-C-GAAA-----CTCATTA--AA---------TGC-AGTTGTGCA--TGTGATTTG-AAA-A-TCA-G----------------------------GAGGG---A--------G
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        25651 68 +     37128 C-CTGATA-T------TA----A-TGAT----TCA-C-GAAA-----CTCATTA--AA---------TGC-AGTTGTGCA--TGTGATTTG-AAA-A-TCA-G----------------------------GAGGG---A--------G
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           4621 67 -      6963 C-CTGATA-T------TT----A-TGAT----TCA-C-ATAA-T-T-CCAATTA--TA---------AGC-AGTTTCGCA--TGTGATTCG-GGA-A-TCA-C----------------------------AA------A--------G
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           63217 68 -     68416 C-CTGATG-T------TA----A-TGAT----TCA-T-GGAA-C-T-CTCATTA--AA---------TGC-CATTGTGCA--TGTAATTTG-GGA-A-TCA-T----------------------------GAG-----A--------G
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                           12323 68 +     13308 C-CTGATG-T------TA----A-TGAT----TCA-T-AGAA-C-T-CTCATTA--AA---------TGC-CATTGTGCA--TCTAATTTG-GGA-A-TCA-T----------------------------GAG-----A--------G
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             9497 68 -     18223 C-CTGATA-T------TA----A-TGAT----TCA-T-GAAA-----CTCATTA--AA---------TGC-AGTTGTGCA--TCTGATTTG-AAA-A-TCA-T----------------------------GAGGG---A--------G
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              1235 68 +    188999 C-CTGATA-T------TA----A-TGAT----TCA-T-GAAA-----CTCATTA--AA---------TGC-AGTTGTGCA--TCTGATTTG-AAA-A-TCA-T----------------------------GAGGG---A--------G
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           45534 68 +     57117 C-CTGATA-T------TA----A-TGAT----TCA-T-GAAA-----CTCATTA--AA---------TGC-AGTTGTGCA--TCTGATTTG-AAA-A-TCA-T----------------------------GAGGG---A--------G
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          50214 68 +     54541 C-CTGATA-T------TA----A-TGAT----TCA-T-GAAA-----CTCATTA--AA---------TGC-AGTTGTGCA--TCTGATTTG-AAA-A-TCA-T----------------------------GAGGG---A--------G
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15964399 68 +  43084221 G-CTAATG-T------TA----A-TGAT----TCA-T-GGCC---TGCTCATCA--AA---------TGt-atttgtt----tctaatttg-aaA-A-TTG-T----------------------------AAA---GGA--------G
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         75018 68 +    196370 C-CCGATA-T------TA----A-TGAT----TCC-T-GAAA-----CTCATTA--AA---------TGC-AGTTGTGCA--TCTGATTTG-AAA-A-TCA-T----------------------------GATGG---A--------G
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          19199 68 +     40510 C-CCGATA-T------TA----A-TGAT----TCC-T-GAAA-----CTCATTA--AA---------TGC-AGTTGTGCA--TCTGATTTG-AAA-A-TCA-T----------------------------GATGG---A--------G
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15143836 68 -  15256731 C-CTGATA-T------TA----A-TGAT----TCA-C-GAAA-----CTCATTA--AA---------TGC-AGTTGTGCA--TGTGATTTG-AAA-A-TCA-G----------------------------GAGGG---A--------G
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      38300 68 -     53260 C-CTGATA-T------TA----A-TGAT----TCA-C-GAAA-----CTCATTA--AA---------TGC-AGTTGTGCA--TGTGATTTG-AAA-A-TCA-G----------------------------GAGGG---A--------G
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101148859 68 + 101219884 C-CTGATA-T------TA----A-TGAT----TCA-C-AAAA-----CTCATTA--AA---------TGC-AGTTGTGCA--TGTGATTTG-AAA-A-TCA-G----------------------------GAGGG---A--------G
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                18725 70 -     21363 C-CTGATA-T------TC----A-TGAT----CCA-C-ATAA-T-T-CCAACGA--TA---------AGC-AGTTTTGCG--TGGGATTTG-GGA-A-TCA-C----------------------------GAG---GGA--------T
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           764029 70 +    964067 C-CTGATA-T------TC----A-TGAT----CCA-C-ATAA-T-T-CCAACGA--TA---------AGC-AGTTTTGCG--TGGGATTTG-GGA-A-TCA-C----------------------------GAG---GGA--------T
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_629495              2290 47 -      3120 -----------------------------------------A-C-T-GTCATAA--TA---------CGT-AGGTATGTA--TACAGTTTA-AAA-A-TCA-T----------------------------G----AGGA--------C
i Chrysochloris_asiatica.ChrAsi_scaffold_629495         I 5 C 0
s Condylura_cristata.JH655880.1                          60622235 27 +  78930452 T-----TG-T------TA----A-TAAT----TCA-C-GT-T-C-T-CTAAGTA-----------------------------------------------------------------------------------------------
i Condylura_cristata.JH655880.1                         C 0 I 30
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         2551 66 -      5782 c-ctgatg-t------ta----a-caat----aca-tata-aA--T-TGTATTA--AA---------TGC-AGCTGTCCA--TATAGTGTG-GGA-A-TCA-T----------------------------GAG---------------
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    I 348 I 2
s Cricetomys_gambianus.CriGam_scaffold_949                 282687 69 -    399297 G-CTGGTA-T------TG----A-TGTC----TCA-T-AGCA-C-C-ATTATCA--AA---------TGC-AGCTGCACA--TCA-CCCTG-GGA-A-TTA-T----------------------------AAG---GGT--------G
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53035056 70 +  72327488 G-CTGTCA-T------TG----A-TGAT----TCA-T-AGCG-C-C-ATTGTTA--AA---------TGC-AAGTGCGTA--TCTGACCAG-GGA-A-Tta-t----------------------------ctt---tgg--------g
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              1656 39 -     22648 ---------------------------ACGAGTCA-T-AT-A-T-T-ATCGtta--aa---------aga-tattgttca--tggg---------------------------------------------------------------
i Crocidura_indochinensis.CroInd_scaffold_27484         I 7 I 302
s Cryptoprocta_ferox.CryFer_flattened_line_19014            57538 63 -     70449 C-CTGAAA-T------TG----A----G----TCA-T-GT-ATC-T-CTTATTA--AA---------TGT-AACTGTGCA--TATGATTTG-GGA-A-TCA-T----------------------------GAG---------------
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 I 4
s Ctenodactylus_gundi.CteGun_scaffold_447                  214307 66 -    956709 T-CTAATG-T------TA----A-GGGC----TCA-C-ATCC-C-T-CTCATCA--AA---------TGC-TGTTGTTCA--CTCGGTTTC-AAA-A-TCT-T----------------------------G-------A--------G
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 34337 97 -     67205 C-CTACAA-T------TA----A-TGAT----TGA-T-GGCC---TGCTCATCA--AA---------GGT-AGCTGTT----TCTGATTAA-AAATG-TTC-CATAATTTGACAAATGACTCACAGAATTCAAA--A-AA--------G
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                20886 68 +     26546 T-CCAATA-T------TA----A-TGAT----TCA-T-GGCC-C-T-CTCATCA--AA---------TGC-AGTTGTT----TCTGATTTG-AAA-A-TTG-T----------------------------AAG---GGC--------G
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             62026 68 -    236241 G-CTAATA-T------TA----A-TAAT----TCA-T-GACC-C-T-TTCATCC--AA---------TGC-AGTTGTT----TCTGATTTG-AAA-A-TTG-T----------------------------AAG---GGA--------T
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          185699 70 -   6883506 C-CTTATA-T------TC----A-TGAT----CCA-C-ATAA-T-T-CCAATTA--TG---------AGC-AGTTTCGCA--TGTGATTTG-GGA-A-TCA-C----------------------------AAG---GGA--------G
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16849152 68 +  31942871 C-CTGATG-T------TA----A-TGAT----TCA-T-GGAA-C-T-CTCATTA--AA---------TGC-CATTGTGCA--TCTGATTTG-GGA-A-TCA-T----------------------------TAG-----A--------G
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80040666 67 -  96802777 C-CTGATANT------TA----A-TGAT----TCA-T-GT-AAC-T-CTTACTA--AA---------TGC-AGCTGTACA--TACGATTTG-GGA-A-CCA-T----------------------------GAG---------------
i Delphinapterus_leucas.KZ290064.1                      C 0 I 2
s Desmodus_rotundus.KZ672188.1                           18701229 65 -  18957592 T-CTGATA-T------TA----A-TGAT----TCA-TTGA-A-C-T-CTAACGA--AG---------TGC-AGCTGTGCA---ATAATTCG-GGG-A-TCA-T----------------------------GAG---------------
i Desmodus_rotundus.KZ672188.1                          C 0 I 2
s Dicerorhinus_sumatrensis.PEKH010003161.1                 326263 64 +    993696 C-CTGATA-T------TA----A-TGAT----TCC-T-GT-AA----CTCATTA--AA---------TGC-AGCTGTGCA--TATGATTTG-AGA-A-TCA-T----------------------------GAG---------------
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 I 4
s Diceros_bicornis.DicBicMic_scaffold_9545                   6904 64 +    151128 C-CTGATA-T------TA----A-TGAT----TCA-T-GT-AA----CTCATTA--AA---------TGC-AGCTGTGCA--CATGACTTG-AGA-C-TCA-T----------------------------GAG---------------
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 I 4
s Dinomys_branickii.DinBra_scaffold_1996                   159661 68 +    228994 G-CTCATT-T------TA----A-TGAT----TCA-T-GACA-G-G-CTCATCA--TA---------TGT-AGTTGTT----TCTAATTTG-AAA-A-TTG-T----------------------------AAG---GGA--------G
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3660379 64 +   4240102 G-TGGGTA-T------AA----A-TCAT-----TA-T-GCCA-C-T-ATCAT-A--AA---------TGC-AA-----CA--TCTGTCCTGAGAA-A-TTA-T----------------------------AAA--A-TA--------G
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  2733 64 -     11986 G-TGGGTA-T------AA----A-TCAT-----TA-T-GCCA-C-T-ATCAT-A--AA---------TGC-AA-----CA--TCTGTCCTGAGAA-A-TTA-T----------------------------AAA--A-TA--------G
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                39993 68 -     73477 G-CTAATA-T------TA----A-TGAT----TCA-T-GGCC-C-C-CTCATCA--AA---------TGA-AGTTGTT----TCTGATTTG-AAA-A-TTG-A----------------------------AAA---GGA--------G
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 I 616
s Echinops_telfairi.JH980316.1                           22999942 61 -  44670279 --------------------------------act-t-ccca-t-a-ttcttca--tcagcactttatac-aaatgtatt--gattcttct-tca-g-tct-t----------------------------c------ct--------t
i Echinops_telfairi.JH980316.1                          I 2 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1496241 63 +   1727528 C-CCAATA-T------TA----A-TGAT----TCA-T-GT-AAC-T----ATTA--AA---------TGC-AGCTGTACA--TACGCTTTG-GGA-A-TCA-T----------------------------GAG---------------
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 I 2
s Elephantulus_edwardii.JH947210.1                        7833027 29 +  15467074 --------------------------------------------------------------------AC-AGGTGTGTA--TATAATAT----A-A-TCA-T----------------------------G----A--A--------A
i Elephantulus_edwardii.JH947210.1                      I 10 C 0
s Ellobius_lutescens.LOEQ01003611.1                        243849 76 -    369425 G-CTGGTG-TTGGCATTG----C-TGAC----TCA-T-CTCAGC---ATTGATA--AT---------TGC-AGCTGCATA--TCTGACCTG-AGA-A-GAA-T----------------------------AAT--TG-T--------G
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Enhydra_lutris.KZ291749.1                              85877506 63 +  99434291 C-CTGGTA-C------TG----A----T----ACA-T-AT-AAC-T-CTTATTA--AA---------TGT-AGCTGTGCA--TATGATTTG-GGA-A-TCA-T----------------------------GAG---------------
i Enhydra_lutris.KZ291749.1                             C 0 I 7
s Eptesicus_fuscus.JH977687.1                             4708986 66 +   6522550 C-CTGATC-T------GA----A-TGAT----TCA-TGGA-A-C-T-CTCATTA--AA---------TGC-AACTGTGCA--TATAATTTA-GGA-A-CTA-T----------------------------GAG---------------
i Eptesicus_fuscus.JH977687.1                           C 0 I 2
s Erinaceus_europaeus.JH835290.1                         11541352 47 +  16010500 ----------------------------------a-t-gT---T-T-TACATTA--AA---------TGA-AGCTATGCA--TATGACATG-GGA-A-TCA-T----------------------------GAG---------------
i Erinaceus_europaeus.JH835290.1                        C 0 I 2
s Erythrocebus_patas.Contig8                             48780869 68 -  48907691 C-CTGATA-T------TA----A-TAAT----TCA-C-GAAA-----CTCATTA--AA---------TGC-AGTTGTGCA--TGTGATTTG-AAA-A-TCA-G----------------------------GACGG---A--------G
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          318886 67 +    330699 C-CTGATANT------TA----A-TGAT----TCA-T-GT-AAC-T-CTCATTA--AA---------TGC-AGCTGTACA--TACGATTTG-GGA-A-CCA-T----------------------------GAG---------------
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 I 2
s Eubalaena_japonica.EubJap_flattened_line_7756             65343 67 +     89355 C-CTGATANT------TA----A-TGAT----TCA-T-GT-AAC-T-CTCATTA--AA---------TGC-AGCTGTACA--TACGATTTG-GGA-A-CCA-T----------------------------GAG---------------
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 I 2
s Eulemur_albifrons.k141_59549                                399 69 +      1101 C-CTGATG-T------TA----AATGAT----TCA-T-GGAA-C-T-CTCATTA--AA---------TGC-CATTGTGCA--TCTGATTTG-GAA-A-TCA-T----------------------------GAG-----A--------G
i Eulemur_albifrons.k141_59549                          C 0 C 0
s Eulemur_collaris.k141_1015201                              2567 69 -      4292 C-CTGATG-T------TA----AATGAT----TCA-T-GGAA-C-T-CTCATTA--AA---------TGC-CATTGTACA--TCTGATTTG-GAA-A-TCA-T----------------------------GAG-----A--------G
i Eulemur_collaris.k141_1015201                         C 0 I 5
s Eulemur_coronatus.k141_3240342                            15700 69 +     36558 C-CTGATG-T------TA----AATGAT----TCA-T-GGAA-C-T-CTCATTA--AA---------TGC-CATTGTGCT--TCTGATTTG-GAA-A-TCA-T----------------------------GAG-----A--------G
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            12025 69 +     60246 C-CTGATG-T------TA----AATGAT----TCA-T-GGAA-C-T-CTCATTA--AA---------TGC-CATTGTGCA--TCTGATTTG-GAA-A-TCA-T----------------------------GAG-----A--------G
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                15508 69 +    109717 C-CTGATG-T------TA----AATGAT----TCA-T-GGAA-C-T-CTCATTA--AA---------TGC-CATTGTACA--TCTGATTTG-GAA-A-TCA-T----------------------------GAG-----A--------G
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 3493 69 -     19505 C-CTGATG-T------TA----AATGAT----TCA-T-GGAA-C-T-CTCATTA--AA---------TGC-CATTGTGCA--TCTGATTTG-GAA-A-TCA-T----------------------------GAG-----A--------G
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                20166 69 +     27497 C-CTGATG-T------TA----AATGAT----TCA-T-GGAA-C-T-CTCATTA--AT---------TGC-CATTGTGCA--TCTGATTTG-GAA-A-TCA-T----------------------------GAG-----A--------G
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           22621 69 +     26808 C-CTGATG-T------TA----AATGAT----TCA-C-GGAA-C-T-CTCATTA--AA---------TGC-CATTGTGCA--TCTGATTTG-GAA-A-TCA-T----------------------------GAG-----A--------G
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                37356 69 +     46535 C-CTGATG-T------TA----AATGAT----TCA-T-GGAA-C-T-CTCATTA--AA---------TGC-CATTGTGCA--TCTGATTTG-GAA-A-TCA-T----------------------------GAG-----A--------G
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              20095 69 -     29447 C-CTGATG-T------TA----AATGAT----TCA-T-GGAA-C-T-CTCATTA--AA---------TGC-CATTGTACA--TCTGATTTG-GAA-A-TCA-T----------------------------GAG-----A--------G
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.AANG03133801.1                                  591 63 -       736 G-CTGAAA-T------TG----A----T----TCA-T-GT-AAC-T-CTTATTA--AA---------TGT-AACTGTGCA--TATGATTTG-GGA-A-TCA-T----------------------------GAG---------------
i Felis_catus.AANG03133801.1                            C 0 I 4
s Felis_catus_fca126.CM031420.1                         129285947 63 - 158578461 G-CTGAAA-T------TG----A----T----TCA-T-GT-AAC-T-CTTATTA--AA---------TGT-AACTGTGCA--TATGATTTG-GGA-A-TCA-T----------------------------GAG---------------
i Felis_catus_fca126.CM031420.1                         C 0 I 4
s Felis_nigripes.FelNig_flattened_line_8080                 27046 63 +     52776 G-CTGAAA-T------TG----A----T----TCA-T-GT-AAC-T-CTTATTA--AA---------TGT-AACTGTGCA--TATGATTTG-GGA-A-TCA-T----------------------------GAG---------------
i Felis_nigripes.FelNig_flattened_line_8080             C 0 I 4
s Fukomys_damarensis.KN123630.1                          13896173 68 -  19261668 G-CTAATA-T------TA----A-TGAT----TCA-T-GATC-C-T-CTCATCA--AA---------tga-gtttttt----tctgatttg-aaa-a-tCA-T----------------------------GAG---GGA--------G
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     215355 68 -    847004 C-TGGATA-T------TT----A-TGGT----CCA-T-GGAA-C-T-CTTATGA--AA---------TGC-CACTGTGCA--TCTGAATTG-GGA-A-TCG-T----------------------------GAG-----C--------G
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           17716 68 -     43889 C-TGGATA-T------TT----A-TGGT----CCA-T-GGAA-C-T-CTTATGA--AA---------TGC-CACTGTGCA--TCTGAATTG-GGA-A-TCG-T----------------------------GAG-----C--------G
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          14861 67 +     27357 C-TGGATA-T------TT----A-TGGT----CCA-T-GGAA-C-T-CTTGTGA--AA---------T-C-CACTGTGCA--TCTGAATTG-GGA-A-TCA-G----------------------------GAG-----C--------G
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               159603 70 +    324696 C-CTGCTA-T------TA----A-TGAT----TCA-T-GTAA-C-T-CTCATTA--AA---------TAC-AGTTGTGCA--TCTAATTTG-GGA-A-TCA-T----------------------------GAG---GGA--------G
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    186039 63 -    189561 C-CCAATA-T------TA----A-TGAT----TCA-T-GT-AAC-T----ATTA--AA---------TGC-AGCTGTACA--TACAATTTG-GGA-A-TCA-T----------------------------GAG---------------
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 I 2
s Glis_glis.GliGli_scaffold_79770                           16500 70 -     18683 C-CTGATA-T------TA----A-TGAT----TCA-T-GGCA-C-T-CTGATCA--AA---------TGC-CGTGGTGCA--TCTGATTTG-AAA-A-TCA-T----------------------------GAG---GGA--------G
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               9284 68 -     14630 C-CTGATA-T------TA----A-TGAT----TCA-T-GAAA-----CTCATTA--AA---------TGT-AGTTGTGCA--TCTGATTTG-AAA-A-TCA-C----------------------------GAGGG---A--------G
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119656384 68 - 195582420 C-CTGATA-T------TA----A-TGAT----TCA-T-GAAA-----CTCATTA--AA---------TGT-AGTTGTGCA--TCTGATTTG-AAA-A-TCA-C----------------------------GAGGG---A--------G
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   79824 59 +    118900 ------------------------TGAT----TCA-T-GGCA-T-T-ATCATCA--AA---------TGC-AGTGGTGTA--TCTGATTTG-AAA-A-TCA-C----------------------------AAG---GGA--------G
i Graphiurus_murinus.GraMur_scaffold_4493               I 7 C 0
s Hapalemur_alaotrensis.k141_1280836                         6087 69 +     10286 C-CTGATG-T------TA----AATGAT----TCA-T-GGAA-C-T-CTCATTA--AA---------TGC-CATTGTGCA--TCTGATTTG-GAA-A-TCA-T----------------------------GAG-----A--------G
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             4565 69 -     11661 C-CTGATG-T------TA----AATGAT----TCA-T-GGAA-C-T-CTCATTA--AA---------TGC-CATTGTGCA--TCTGATTTG-GAA-A-TCA-C----------------------------GAG-----A--------G
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                             9892 69 +     56096 C-CTGATG-T------TA----AATGAT----TCA-T-GGAA-C-T-CTCATTA--AA---------TGC-CATTGTGCA--TCTGATTTG-GAA-A-TCA-T----------------------------GAG-----A--------G
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        33141 69 -     42470 C-CTGATG-T------TA----AATGAT----TCA-T-GGAA-C-T-CTCATTA--AA---------TGC-CATTGTGCA--CCTGATTTG-GAA-A-TCA-T----------------------------GAG-----A--------G
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        49764 69 -     54384 C-CTGATG-T------TA----AATGAT----TCA-T-GGAA-C-T-CTCATTA--AA---------TGC-CACTGTGCA--TCTGATTTG-GAA-A-TCA-T----------------------------GAG-----A--------G
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              22676 63 +     53719 T-CGGAAA-T------TG----A----G----TCC-T-TT-A-CAT-CTTATTA--AA---------TGT-AACTGTGCA--TATGATTTG-GGA-A-TCC-T----------------------------GAG---------------
i Helogale_parvula.HelPar_flattened_line_22962          C 0 I 4
s Hemitragus_hylocrius.HemHyl_scaffold_16669                32910 63 -     91191 C-CCAATA-T------TA----A-TGAT----TCA-T-GT-AAC-T----ATTA--AA---------TGC-AGCTGTACA--TATGATTTG-GGA-A-TCA-T----------------------------GAG---------------
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 I 2
s Heterocephalus_glaber.JH602058.1                        2560664 68 +  31725842 G-CTAATA-T------TA----A-TGAT----TCA-T-GACC-T-T-CTCACCA--AA---------TGC-AGTTGTT----TCTGATTTG-AAA-A-TCA-C----------------------------AAG---GGA--------A
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               62899 69 +     73687 G-CT-ATC-T------TC----A-TGTT----TCA-T-GTTG-C-C-TTCATTA--CT---------TGC-AGGTGGGCA--TGTAACTTG-GGA-A-TCA-C----------------------------AAG---GGA--------T
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              150669 66 +    277961 C-CTTATA-T------TA----A-AGAT----TCA-T-GT-GTC-T-CTCATTA--AA---------TGC-AGCCATACA--TAGGATTTG-GGA-A-TCA-T----------------------------GAG---------------
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 I 2
s Hipposideros_armiger.JXIK01001085.1                      283067 66 -    477199 c-CTGATA-T------TA----A-TGAT----TCC-TAGA-A-C-T-CTCATTA--AA---------TGC-AGCTGTATA--TATCATTTA-GGA-A-TCA-T----------------------------GAG---------------
i Hipposideros_armiger.JXIK01001085.1                   C 0 I 78
s Hipposideros_galeritus.HipGal_scaffold_52959                837 66 +     26078 C-CTGATA-T------TA----A-TGAT----TCA-TAGA-A-C-T-CTCATTA--AA---------TGC-AGCTGTATA--TTTCATTTG-GGA-A-TCA-T----------------------------GAG---------------
i Hipposideros_galeritus.HipGal_scaffold_52959          C 0 I 84
s Hoolock_leuconedys.ctg315                                   350290 68 +    431944 A-CTGATA-T------TA----A-TGAT----TTG-T-GAAA-----CTCATTA--AA---------TGC-AGTTGTGCA--TCTGATTTG-AAA-A-TCA-T----------------------------GAGGG---A--------G
i Hoolock_leuconedys.ctg315                                C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 23148 63 -     67322 C-CTGAAA-T------TG----A----G----TCA-T-GT-ACC-T-CTTATTA--AA---------TAT-AACTGTGCA--TATGATTTG-GGA-A-TCA-T----------------------------GAG---------------
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 I 4
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           21278 68 -    119109 G-CTAATA-C------TA----A-TGAT----TCA-C-GGCCA--T-CTCATCA--AA---------TGA-AGTTGTT----TCTGATTTG-AAA-A-TTG-T----------------------------AAG---GCA--------G
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_1816750                             1771 26 +      3202 A-CTGATA-T------TA----A-TGAT----TTG-T-GAAA-----CTC---------------------------------------------------------------------------------------------------
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1633646                              1741 26 -      2102 A-CTGATA-T------TA----A-TGAT----TTG-T-GAAA-----CTC---------------------------------------------------------------------------------------------------
i Hylobates_agilis.k141_1633646                         C 0 C 0
s Hylobates_klossii.k141_468230                              3258 26 +      5464 A-CTGATA-T------TA----A-TGAT----TTG-T-GAAA-----CTC---------------------------------------------------------------------------------------------------
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14628605 26 -  25970782 A-CTGATA-T------TA----A-TGAT----TTG-T-GAAA-----CTC---------------------------------------------------------------------------------------------------
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            1157 26 +      4161 A-CTGATA-T------TA----A-TGAT----TTG-T-GAAA-----CTC---------------------------------------------------------------------------------------------------
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             37467 26 -     60944 A-CTGATA-T------TA----A-TGAT----TTG-T-GAAA-----CTC---------------------------------------------------------------------------------------------------
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     9571 68 +     22540 C-CTAATA-T------TA----A-TGAT----TCA-T-GGCC-T-T-CTCATCG--AG---------TGC-AGTTGTG----TCCTATTTG-AAA-A-TCA-T----------------------------AAG---GGA--------G
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7130408 70 +  13083262 A-CTGGTA-T------TA----A-TGAT----TCA-T-GGCC-C-T-CTCATCA--AA---------TGC-AGTTGAGCA--TCTGATTTG-GAA-A-TCA-T----------------------------GAG---GGA--------A
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   1614 66 +      3484 C-CTGATG-T------TA----A-TGAT----TCA-T-GGAA-C-T-CTC--TA--AA---------TGC-CATTGTGCA--TCTGATTTG-GGA-A-TCA-T----------------------------GAG-----A--------G
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              12878 67 +     17520 G-CTGATANT------TA----A-TGAT----TCA-T-GT-AAC-T-CTCACTA--AA---------TGC-AGCTATACA--TACGATTTG-GGA-A-CCA-T----------------------------GAG---------------
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 I 2
s Kogia_breviceps.KogBre_flattened_line_35920               27497 67 +     37189 C-CTGATANT------TA----A-TGAT----TCA-T-GT-AAC-T-CTCACTA--AA---------TGC-AGCTGTACA--TACGATTTG-GGA-A-CCA-C----------------------------GAG---------------
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 I 2
s Lagothrix_lagothricha.k141_12968                          54054 68 -    147782 C-CTGATA-T------TA----A-TGAT----TCA-T-GAAA-----CTCATTA--AA---------TGC-AGTTGTGCA--TCTGATTTG-AGA-A-TCA-T----------------------------GAGGG---A--------G
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    5598 66 +     26176 C-CCGATA-T------GG----A-TGAT----TCA-TGGA-A-C-T-TTTGTTA--AA---------TGC-AGCTGTGCA--TATAATTTA-AGA-A-CTA-T----------------------------GAG---------------
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 I 2
s Lemur_catta.scaffold_1                                258411439 69 - 285822530 C-CTGATG-T------TA----AATGAC----TCA-T-GGAA-C-T-CTCATTA--AA---------TGC-CATTGTGCA--TCTGATTTG-GAA-A-TCA-T----------------------------GAG-----A--------G
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        28754 68 +     39228 C-CTGATG-T------TA----G-TAAT----TCA-T-GGAA-C-T-CTCATTA--AA---------CGC-CATTGTACA--TCTGATTTG-GGA-A-TCA-T----------------------------GAG-----A--------G
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            58118 68 +     63517 C-CTGATG-T------TA----G-TGAT----TCA-T-GGAA-C-T-CTCATTA--AA---------TGC-CATTGTACA--TCTGATTTG-GGA-A-TCA-T----------------------------GAG-----A--------G
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        36498 68 -     38897 C-CTGATG-T------TA----G-TGAT----TCA-T-GGAA-C-T-CTCATTA--AA---------TGC-CATTGTACA--TCTGATTTG-GGA-A-TCA-T----------------------------GAG-----A--------G
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      2544 68 -     13103 C-CTGATG-T------TA----G-TGAT----TCA-T-GGAA-C-T-CTCATTA--AA---------CGC-CATTGTGCA--TCTGAGTTG-GGA-A-TCA-T----------------------------GAG-----A--------G
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3091482 63 -   3498232 C-CTGACA-T------TG----A----T----TCA-C-AT-GGC-T-CTTATTA--AA---------TGT-AGCTGTGCA--TATGATTTG-GGA-A-TCA-C----------------------------GAG---------------
i Leptonychotes_weddellii.KB714749.1                    C 0 I 7
s Lepus_americanus.LepAme_scaffold_62849                    20904 70 +     22452 C-TTAATA-T------TA----A-TGAT----TCA-T-GGGT-C-T-CATATTA--AA---------TGC-ATTTCTGTA--TCTGATTTG-AGA-A-TCA-A----------------------------GAG--A-CA--------G
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            139812 67 +   3060487 C-CTGATANT------TA----A-TGAT----TCA-T-GT-AAC-T-CTCACTA--AA---------TGC-AGCTGTACA--TACGATTTG-GGA-A-CCA-T----------------------------GAG---------------
i Lipotes_vexillifer.KE558548.1                         C 0 I 2
s Lophocebus_aterrimus.ctg55                             19252490 68 +  19376315 C-CTGATA-T------TA----A-TGAT----TCA-T-GAAA-----CTCGTTA--AA---------TGC-AGTTGTGCA--TGTGATTCG-AAA-A-TCA-G----------------------------GAGGG---A--------G
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           15306 67 +     84689 C-TGGATA-T------TT----A-CTGT----CCA-T-GGAA-T-T-CTTCTGA--AA---------T-C-CACTGTGCA--TCTGAATGG-AGA-A-TCA-T----------------------------GAG-----C--------A
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3783045 67 +   6799190 C-TGGATA-T------TT----A-CTGT----CCA-T-GGAA-T-T-CTTCTGA--AA---------T-C-CACTGTGCA--TCTGAATGG-AGA-A-TCA-T----------------------------GAG-----C--------A
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20598829 70 -  62548349 T-CTGGTA-T------TC----A-CATT----TCA-T-GTAA-C-T-TTCATTA--TA---------TGC-AGGTGTGCT--TATAATTTG-GGA-A-TCA-T----------------------------GAG---GGA--------T
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11095235 63 +  39895028 C-CTGATA-T------TG----A----T----TCA-T-GT-AAC-T-CTTATTA--AA---------TGT-AGCCGTGCA--TATGATTTG-GGA-A-TCA-T----------------------------GAG---------------
i Lycaon_pictus.CM007556.1                              C 0 I 4
s Macaca_arctoides.k141_2201161                             24241 68 +     74745 C-CTGATA-T------TA----A-TGAT----TCA-T-GAAA-----CTCGTTA--AA---------TGC-AGTTGTGCA--TGTGATTCG-AAA-A-TCA-G----------------------------GAGGG---A--------G
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12710702 68 +  12821369 C-CTGATA-T------TA----A-TGAT----TCA-T-GAAA-----CTCGTTA--AA---------TGC-AGTTGTGCA--TGTGATTCG-AAA-A-TCA-G----------------------------GAGGG---A--------G
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                3275 68 -     26467 C-CTGGTA-T------TA----A-TGAT----TCA-T-GAAA-----CTCGTTA--AA---------TGC-AGTTGTGCA--TGTGATTCG-AAA-A-TCA-G----------------------------GAGGG---A--------G
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           51146 68 +     63263 C-CTGATA-T------TA----A-TGAT----TCA-T-GAAA-----CTCGTTA--AA---------TGC-AGTTGTGCA--TGTGATTCG-AAA-A-TCA-G----------------------------GAGGG---A--------G
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 3256 68 -     26361 C-CTGATA-T------TA----A-TGAT----TCA-T-GAAA-----CTCGTTA--AA---------TGC-AGTTGTGCA--TGTGATTCG-AAA-A-TCA-G----------------------------GAGGG---A--------G
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 6446 68 -      7381 C-CTGATA-T------TA----A-TGAT----TCA-T-GAAA-----CTCGTTA--AA---------TGC-AGTTGTGCA--TGTGATTCG-AAA-A-TCA-G----------------------------GAGGG---A--------G
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  49675 68 -     79256 T-CTGATA-T------TA----A-TGAT----TCA-T-GAAA-----CTCGTTA--AA---------TGC-AGTTGTGCA--TGTGATTCG-AAA-A-TCA-G----------------------------GAGGG---A--------G
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196039773 68 + 196197964 C-CTGGTA-T------TA----A-TGAT----TCA-T-GAAA-----CTCGTTA--AA---------TGC-AGTTGTGCA--TGTGATTCG-AAA-A-TCA-G----------------------------GAGGG---A--------G
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11449943 68 +  11645122 C-CTGATA-T------TA----A-TGAT----TCA-T-GAAA-----CTCGTTA--AA---------TGC-AGTTGTGCA--TGTGATTCG-AAA-A-TCA-G----------------------------GAGGG---A--------G
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   8629 68 -     46448 T-CTGATA-T------TA----A-TGAT----TCA-T-GAAA-----CTCGTTA--AA---------TGC-AGTTGTGCA--TGTGATTCG-AAA-A-TCA-G----------------------------GAGGG---A--------G
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                6292 68 -     13212 C-CTGATA-T------TA----A-TGAT----TCA-T-GAAA-----CTCGTTA--AA---------TGC-AGTTGTGCA--TGTGATTCG-AAA-A-TCA-G----------------------------GAGGG---A--------G
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 19972 68 -     55006 C-CTGATA-T------TA----A-TGAT----TCA-T-GAAA-----CTCGTTA--AA---------TGC-AGTTGTGCA--TGTGATTCG-AAA-A-TCA-G----------------------------GAGGG---A--------G
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43845087 68 +  43892939 C-CTGATA-T------TA----A-TGAT----TCA-T-GAAA-----CTCGTTA--AA---------TGC-AGTTGTGCA--TGTGATTCG-AAA-A-TCA-G----------------------------GAGGG---A--------G
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               21256 68 -     24607 C-CTGATA-T------TA----A-TGAT----TCA-T-GAAA-----CTCGTTA--AA---------TGC-AGTTGTGCA--TGTGATTTG-AAA-A-TCA-G----------------------------GAGGG---A--------G
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               8626 68 -     27140 T-CTGATA-T------TA----A-TGAT----TCA-T-GAAA-----CTCGTTA--AA---------TGC-AGTTGTGCA--TGTGATTCG-AAA-A-TCA-G----------------------------GAGGG---A--------G
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43441662 68 -  43563597 C-CTGATA-T------TA----A-TGAT----TCA-T-GGAA-----CTCGTTA--AA---------TGC-AGTTGTGCA--TGTGATTCG-AAA-A-TCA-G----------------------------GAGGG---A--------G
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4454466 68 -   4543643 C-CTGATA-T------TA----A-TGAT----TCA-T-GGAA-----CTCGTTA--AA---------TGC-AGTTGTGCA--TGTGATTCG-AAA-A-TCA-G----------------------------GAGGG---A--------G
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            152205 64 +    252755 C-TTGATA-T------TA----A-TGAT----TCA-T-GT-AA----CTCATTA--AA---------TGC-AGCTGTGCA--CATGATTTG-GGG-A-TCA-T----------------------------GAG---------------
i Manis_javanica.JSZB01003966.1                         C 0 I 4
s Manis_pentadactyla.KN017078.1                             39795 64 +     58827 C-TTGATA-C------TA----A-TGAT----TCA-T-GT-AA----CTCATTA--AA---------TGC-AGCTGTGCA--TATGATTTG-AGG-A-TCA-T----------------------------GAG---------------
i Manis_pentadactyla.KN017078.1                         C 0 I 4
s Marmota_marmota.CZRN01000005.1                         36878280 70 +  64221397 A-CTGGTA-T------TA----A-AGAT----TCA-T-GGCA-C-T-CTCATCA--AA---------TGC-AGTTGAGCA--TCTGATTTG-GAA-A-TCA-T----------------------------GAG---GGA--------A
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       65633 67 -    234502 CCCTGAGC-C------TA----G-TGAG----TCA-CAGA-CA--T-CTCATTA--AA---------TGC-AGCTGTGTA--CATAGTTTG-GGG-C-TCA-T----------------------------GAG---------------
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 I 2
s Mellivora_capensis.MelCap_flattened_line_15433             6398 63 -     87323 C-CTGGTA-C------TG----A----T----ACA-T-GT-AAA-T-CTTATTA--AA---------TGT-AGCTGTGCA--TATGATTTG-GGA-A-TCA-T----------------------------GAG---------------
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 I 7
s Meriones_unguiculatus.MerUng_scaffold_9483                 1304 70 +    115071 G-CTGGCA-T------TG----A-TGAT----TCA-T-AAGA-C-T-ATTATCA--AA---------CGT-AGCTGCATA--TCTGACTTG-GAA-A-TGA-T----------------------------GAG--TG-T--------G
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1051577 69 -  26018355 G-CTGTCA-T------TG----G-TAAT----TCA-T-AGTG-C-C-ATTGTTA--AA---------TTT-GGCTGCATA--TCTGATCTG-TGT-C-TTA-T----------------------------CTG--TG-G---------
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    2469 67 -     12939 C-CTGATANT------TA----A-TGAT----TCA-T-GT-AAC-T-CTCATTA--AA---------TGC-AGCTGTACA--TACGATTTG-GGA-A-CCA-T----------------------------GAG---------------
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 I 2
s Microcebus_murinus.CM007691.1                          16514497 59 +  47401472 C-CTGATG-T------TA----A-TGAT----TCA-T-GGAA-C-T-CTCATTA--AA---------TGC-CATTGTGCA--TCTGATTTG-GGA-A----------------------------------------------------
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  41516 48 -     48017 -----------------------------------------C-C-T-TTCATTA--TA---------TGC-AACTGCACA--TAAAATTTG-GAA-G-ACA-T-------GA----T--------------G----A--A--------T
i Microgale_talazaci.MicTal_scaffold_34660              I 5 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               24976 65 -     32043 T-CTGATA-T------CA----A-TAAT----TCA-TTGA-A-C-T-CTTATGA--AG---------TGC-AGCTGTGCA---ATAATTTG-GGG-A-TCA-T----------------------------GAG---------------
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 I 2
s Microtus_ochrogaster.CM001673.1                        22824653 70 -  98408828 G-CTGGTG-T------TG----C-TGTC----TCA-T-CTCA-C-C-ACTGCTA--AT---------TGT-AGTTGTATA--TCTGACCTG-AGA-A-GTA-T----------------------------AAT--TG-T--------G
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8213035 66 +  10048721 C-CTGATA-T------TA----A-TGAT----TCA-TGGA-A-C-T-CTCATTA--AG---------TGC-AGCTGTGCA--TATAATTTG-GGA-A-TCA-T----------------------------GAG---------------
i Miniopterus_natalensis.LDJU01000022.1                 C 0 I 2
s Miniopterus_schreibersii.MinSch_scaffold_24116            37524 66 +     45743 C-CTGATA-T------TA----A-TGAT----TCA-TGGA-A-C-T-CTCATTA--AG---------TGC-AGCTGTGCA--TATAATTTG-GGA-A-TCA-T----------------------------GAG---------------
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 I 2
s Miopithecus_ogouensis.k141_2935907                         6208 68 +     29742 C-CTGATA-T------TA----A-TGAT----TCA-C-GAAA-----CTCATTA--AA---------TGC-AGTTGTGCA--TGTGACTTG-AAA-A-TCA-G----------------------------GAGGG---A--------G
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        16978 63 -    104932 C-CTGACA-T------TG----A----T----TCA-C-AT-GGC-T-CTTATTA--AA---------TGT-AGCTGTGCA--TATGATTTG-GGA-A-TCA-C----------------------------GAG---------------
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 I 7
s Mirza_zaza.k141_593947                                     5180 59 -     12809 C-CTGATG-T------TA----A-TGAT----TTA-T-GGAA-C-T-CTTATTA--AA---------TGC-CATTGTGCA--TCTGATTTG-GGA-A----------------------------------------------------
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 150259 67 +    154973 C-CTGATANT------TA----A-TGAT----TCA-T-GT-AAC-T-CTTACTA--AA---------TGC-AGCTGTACA--TACGATTTG-GGA-A-CCA-T----------------------------GAG---------------
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 I 2
s Mormoops_blainvillei.MorMeg_scaffold_2952                163514 65 +    265003 T-CTGACA-T------TA----A-TGAT----TCA-TTGA-A-C-T-CTTATTA--AG---------TGC-AGCTGTGTG---ATAATTTG-GGG-A-CTA-C----------------------------GAG---------------
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 I 2
s Moschus_moschiferus.MosMos_scaffold_78805                  6259 63 -     19904 C-CCAATA-T------GA----A-TGAT----TCA-T-GT-AAC-T----ATTA--AG---------TGC-AGCTGTACA--TATGATTTG-GGA-A-TCA-T----------------------------GAG---------------
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 I 2
s Mungos_mungo.MunMun_flattened_line_8729                  150351 63 -    168139 T-CGGAAA-T------TG----A----G----TCC-T-TT-ACC-T-CTTATTA--AA---------TGT-AACTGTGCA--TATGATTTG-GGA-A-TCA-T----------------------------GAG---------------
i Mungos_mungo.MunMun_flattened_line_8729               C 0 I 4
s Murina_feae.MurFea_scaffold_2254                          24448 66 -    100666 C-CTGCTA-T------GA----A-TGAT----TCA-TGGA-A-C-T-CTGATTA--AA---------TGC-AGCTGTATA--TATAATTTA-GGA-A-CTC-T----------------------------GAG---------------
i Murina_feae.MurFea_scaffold_2254                      C 0 I 2
s Mus_caroli.LT608236.1                                  70771874 70 +  92629107 G-CTGGCA-T------TG----G-TGAT----TCA-T-GGGATC---ATTATCA--AA---------TGC-AGCTGCACA--TCTAACCTG-AAA-A-TGA-T----------------------------GAG--TG-T--------G
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75493928 70 +  98207768 G-CTGGCA-T------TG----A-TGAT----TCA-T-AGGATC---ATTATCA--AA---------TGC-AGCTGCACA--TCTAACCTG-AAA-A-TGA-T----------------------------GAG--TG-T--------G
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67560680 70 +  89017189 G-CTGGCA-T------TG----A-TGAT----TCA-T-AGGATC---ATTATCA--AA---------TAC-AGCTGCACA--TCTAACCTG-AAA-A-TGA-T----------------------------GAG--TG-T--------G
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74336654 70 +  97876770 G-CTGGCA-T------TG----A-TGAT----TCA-C-AGGATC---ATTATCA--AA---------TGC-AGCAGCACA--TCCAACCTG-ACA-A-TGA-T----------------------------GAG--TG-T--------G
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             14903 70 +     98495 C-TTGTTA-T------TA----A-TGAT----TCA-T-GGCA-C-T-CTCATCA--AA---------TGC-AGTGGTGCT--TCTGATTTG-AAA-A-TTA-T----------------------------GAG---GAA--------G
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4428237 63 -  28371801 C-CTGGTA-C------TC----A----T----ACA-T-GT-AAT-T-CTTATTA--AA---------TGT-AGCTGTGCA--TATGATTTG-GGA-A-TCA-T----------------------------GAG---------------
i Mustela_putorius.JH417978.1                           C 0 I 7
s Myocastor_coypus.MyoCoy_scaffold_3653                     93870 68 -    117718 G-CGGCAA-T------GA----A-TGAC----TGG-T-GGCC---TGCTCATCA--GA---------GGT-CGCTGTT----TCTGTCTCC-AAA-C-ATG-T----------------------------AAA---GGA--------G
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               971320 66 +   8389877 C-CTGATA-T------GA----A-TGAT----TCA-TGGA-A-C-T-CTCATTA--AA---------TGC-AGCTGTACA--TATAATTTA-GGA-A-CTA-T----------------------------GAG---------------
i Myotis_brandtii.KE161952.1                            C 0 I 2
s Myotis_davidii.KB114863.1                               5022741 65 +   6462685 C--TGATA-T------GA----A-TGAT----TCA-TGGA-A-C-T-CTCATTA--AA---------TGC-AGCTGTACA--TATAATTTA-GGA-A-CCA-T----------------------------GAG---------------
i Myotis_davidii.KB114863.1                             C 0 I 2
s Myotis_lucifugus.GL429887.1                             3468824 66 -   3747815 C-CTGATA-T------GA----A-TGAT----TCA-TGGA-A-C-T-CTCATTA--AA---------TGC-AGCTGTACA--TATAATTTA-GGA-A-CTA-T----------------------------GAG---------------
i Myotis_lucifugus.GL429887.1                           C 0 I 2
s Myotis_myotis.MyoMyo_scaffold_6123                        14065 66 +     66751 C-CTGATA-T------GA----A-TGAT----TCA-TGGA-A-C-T-CTCATTA--AA---------TGC-AGCTGTACA--TATAATTTA-GGA-A-CTA-T----------------------------GAG---------------
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 I 2
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             7674 69 -      8794 C-TTGATA-T------TC----A-TGAT----CCA-C-ATAA-C-T-CCAATGA--TA---------AGC-AGTT-TGCA--TGTGATTTG-GGA-A-CCA-A----------------------------GAG---GGA--------G
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            120420 57 +    362372 ----------------------------------------CA-C-T-GTCACCA--AA---------TAC-AACTGTGCA--TCAGACCTG-GGA-A-TCA-T----------------------------GAG---GGTAAGGGAGAG
i Nannospalax_galili.KL201303.1                         I 14 I 2
s Neomonachus_schauinslandi.NINY01007774.1                4490376 63 -  14209539 C-CTGACA-T------TG----A----T----TCA-C-AT-GGC-T-CTTATTA--AA---------TGT-AGCTGTGCA--TATGATTTG-GGA-A-TCA-C----------------------------GAG---------------
i Neomonachus_schauinslandi.NINY01007774.1              C 0 I 7
s Neophocaena_asiaeorientalis.KZ688543.1                  3954850 67 -   4490290 C-CTGATANT------TA----A-TGAT----TCA-T-GT-AAC-T-CTCACTA--AA---------TGC-AGCTGTACA--TACGATTTG-GGA-A-CCA-T----------------------------GAG---------------
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 I 2
s Noctilio_leporinus.NocLep_scaffold_12062                  50573 66 +     94413 T-CTGGTA-T------TA----A-TGAT----TCA-TTGT-A-C-T-TTTATTA--AA---------GGC-AGCTATGCA--TATAATTTG-GGG-A-TCA-T----------------------------GAG---------------
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 I 2
s Nomascus_annamensis.k141_762468                             276 68 -      2755 A-CTGATA-T------TA----A-TGAT----TTG-T-GAAA-----CTCATTA--AA---------GGC-AGTTGTGCA--TCTGATTTG-AAA-A-TCA-T----------------------------GAGGG---A--------G
i Nomascus_annamensis.k141_762468                       C 0 C 0
s Nomascus_concolor.k141_70405                                896 68 +      1153 A-CTGATA-T------TA----A-TGAT----TTG-T-GAAA-----CTCATTA--AA---------TGC-AGTTGTGCA--TCTCATTTG-AAA-A-TCA-T----------------------------GAGGG---A--------G
i Nomascus_concolor.k141_70405                          C 0 C 0
s Nomascus_gabriellae.k141_1400361                            827 68 -      2203 A-CTGATA-T------TA----A-TGAT----TTG-T-GAAA-----CTCATTA--AA---------GGC-AGTTGTGCA--TCTGATTTG-AAA-A-TCA-T----------------------------GAGGG---A--------G
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_1022                            1683 68 -     11638 A-CTGATA-T------TA----A-TGAT----TTG-T-GAAA-----CTCATTA--AA---------TGC-AGTTGTGCA--TCTGATTTG-AAA-A-TCA-T----------------------------GAGGG---A--------G
i Nomascus_siki_b.tarseq_1022                       C 0 I 6846
s Nomascus_siki_a.k141_421408                                   741 68 +     16235 A-CTGATA-T------TA----A-TGAT----CTG-T-GAAA-----CTCATTA--AA---------TGC-AGTTGTGCA--TCTGATTTG-AAA-A-TCA-T----------------------------GAGGG---A--------G
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                38100 63 +   3668941 C-CTGATA-T------TG----A----T----TCA-T-GT-AAC-T-CTTATTA--AA---------TGT-AGCCGTGCA--TATGATTTG-GGA-A-TCA-T----------------------------GAG---------------
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 I 4
s Nycticebus_bengalensis.LG16                            65571981 68 -  95554990 C-TGGATA-T------TT----A-TGGT----CCA-T-GGAA-C-T-CTTCTGA--AA---------TGC-CACTGTGCA--TCTGAATGG-GAA-A-TCA-T----------------------------GAG-----C--------G
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_771591                            15391 68 +     16181 C-TGGATA-T------TT----A-TGGT----CCA-T-GGAA-C-T-CTTCTGA--AA---------TGC-CACTGTGCA--TCTGAATGG-GAA-A-TCA-T----------------------------GAG-----C--------G
i Nycticebus_coucang.k141_771591                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65680169 68 +  89412551 C-TGGATA-T------TT----A-TGGT----CCA-T-GGAA-C-T-CTTCTGA--AA---------TGC-CCCTGTGCA--TCTGAATGG-GAA-A-TCA-T----------------------------GAG-----C--------G
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Octodon_degus.JH651621.1                                3689329 96 +  10294119 c-CTGCTA-T------TA----G-TGAT----TGA-T-GGCC---TGCTCATCA--AA---------GGT-AGTTGTT----TCTGACTTA-AAA-G-TTC-TATAATTTGACAAATAACTCACAGAATTCAAA---GGA--------G
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             685079 63 -   3126709 C-CTGACA-T------TG----A----T----TCA-C-GT-GGC-T-TTTATTA--AA---------TGT-AGCTGTGCA--TATGATTTG-GTA-A-TCA-C----------------------------GAG---------------
i Odobenus_rosmarus.KB229369.1                          C 0 I 7
s Odocoileus_virginianus.KZ101650.1                       1083691 62 +   1425656 C-CCAATA-T------TA----A-TGAT----TCA-T-GT-AAT-T----AT-A--AA---------TGC-AGCTGCACA--TATGCTTTG-GGA-A-CCA-T----------------------------GAG---------------
i Odocoileus_virginianus.KZ101650.1                     C 0 I 2
s Okapia_johnstoni.LVCL01S0017931.1                         41773 63 +     78940 C-CCAATA-T------TA----A-CGAT----TCA-T-GT-AAC-T----ATTA--AA---------TGC-AGCTGTACA--TACGATTTG-GGA-A-TCA-T----------------------------GAG---------------
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 I 2
s Ondatra_zibethicus.OndZib_scaffold_6821                  130449 70 +    145789 G-CTGGGG-T------TG----C-TGAC----TCC-T-CTCA-C-C-ATTGCTA--AT---------TGC-AGCTGCATA--TCTGACCTG-AGA-A-TTA-T----------------------------AAT--TG-T--------G
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  43145 69 +     62360 A-CTGTCA-A------TG----A-TGAT----TCA-T-TGCA-C---ATTGTTA--AA---------TAC-AGCTGCATA--TCTGACCTG-GGA-A-TTA-T----------------------------AAC--TG-T--------G
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7228524 67 -   7562323 A-CTGATANT------TA----A-TGAT----TCA-T-GT-AAC-T-CTCACTA--AA---------TGC-AGCTGTACA--TACGATTTG-GGA-A-CCA-T----------------------------GAG---------------
i Orcinus_orca.KB316965.1                               C 0 I 2
s Orycteropus_afer.OryAfe_flattened_line_13509              64287 52 -     66828 --------------------------------ATA-T-GCCA-T-T-TTCATTA--TT---------TGC-ACATGTGCC--TATAATTTG-GGA-A-TCT-T----------------------------G-----G-A--------T
i Orycteropus_afer.OryAfe_flattened_line_13509          I 2 C 0
s Oryctolagus_cuniculus.CM000803.1                      141883919 70 + 163896628 C-TTAATA-T------TA----A-TGAT----TCA-T-GGGA-C-T-CATATTA--AA---------TAC-ATTTCTGTA--TCTGATTTG-AGA-a-tca-a----------------------------gag---aga--------g
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      315238 63 -    505867 C-CTGATA-T------TG----A----T----TCA-C-GT-AAC-T-CTTATTA--AA---------TGT-AGCTGTGCA--TATGATTTG-GGA-A-TAA-T----------------------------GAG---------------
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 I 4
s Otolemur_crassicaudatus.k141_505435                        5217 68 -     53940 C-TGGATA-T------TT----A-TGGT----CCA-T-GGAA-C-T-CTTATGA--AA---------TGC-CACTGTGCA--TCTGAATTG-GGA-A-TCA-T----------------------------GAG-----C--------G
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18013190 68 -  38779656 T-TGGATA-T------TT----A-TGGT----CCA-T-GGAA-C-T-CTTATGA--AA---------TGC-CACTGTGCA--TCTGAATTG-GGA-A-TCA-T----------------------------GAG-----C--------G
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134082696 63 - 275406953 C-CCAATA-T------TA----A-TGAC----TCA-T-GT-AAC-T----ATTA--AA---------TGC-AGCTGTACA--TATGATTTG-GGA-A-TCA-T----------------------------GAG---------------
i Ovis_aries.CM001582.2                                 C 0 I 2
s Ovis_canadensis.OviCan_scaffold_6251                      83930 63 +    140051 C-CCAATA-T------TA----A-TGAT----TCA-T-GT-AAC-T----ATTA--AA---------TGC-AGCTGTACA--TATGATTTG-GGA-A-TCA-T----------------------------GAG---------------
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 I 2
s Pan_paniscus.CM003386.1                               127578563 68 - 205426864 C-CTGATA-T------TA----A-TGAT----TCA-T-GAAA-----CTCATTA--AA---------TGC-AGTTGTGCA--TCTGATTTG-AAA-A-TCA-T----------------------------GAGGG---A--------G
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120155723 68 - 196562556 C-CTGATA-T------TA----A-TGAT----TCA-T-GAAA-----CTCATTA--AA---------TGC-AGTTGTGCA--TCTGATTTG-AAA-A-TCA-T----------------------------GAGGG---A--------G
i Pan_troglodytes.CM009241.2                            C 0 I 32
s Panthera_onca.PanOnc_flattened_line_1615                  39966 63 +    295523 G-CTGAAA-T------TG----A----T----TCA-T-GT-AAC-T-CTTATTA--AA---------TGT-AACTGTGCA--TATGATTTG-GGA-A-TCA-T----------------------------GAA---------------
i Panthera_onca.PanOnc_flattened_line_1615              C 0 I 4
s Panthera_pardus.KV860323.1                              3643781 63 +  18214204 G-CTGAAA-T------TG----A----T----TCA-T-GT-AAC-T-CTTATTA--AA---------TGT-AACTGTGCA--TATGATTTG-GGA-A-TCA-T----------------------------GAA---------------
i Panthera_pardus.KV860323.1                            C 0 I 4
s Panthera_tigris.KE721879.1                              5033429 63 -   6340057 G-CTGAAA-T------TG----A----T----TCA-T-GT-AAC-T-CTTATTA--AA---------TGT-AACTGTGCA--TATGATTTG-GGA-A-TCA-T----------------------------GAA---------------
i Panthera_tigris.KE721879.1                            C 0 I 4
s Pantholops_hodgsonii.KE114631.1                         1071572 63 -   1292953 C-CCAATA-T------TA----A-TGAT----TCA-T-GT-GAC-T----ATTA--AA---------TGC-AGCTGTACA--TATGATTTG-GGA-A-TCA-T----------------------------GAG---------------
i Pantholops_hodgsonii.KE114631.1                       C 0 I 2
s Papio_anubis.CM001492.2                               188160451 68 - 188283584 C-CTGATA-T------TA----A-TGAT----TCA-T-GAAA-----CTCGTTA--AA---------TGC-AGTTGTGCA--TGTGATTCG-AAA-A-TCA-G----------------------------GAGGG---A--------G
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              3541 68 +     25005 C-CTGATA-T------TA----A-TGAT----TCA-T-GAAA-----CTCGTTA--AA---------TGC-AGTTGTGCA--TGTGATTCG-AAA-A-TCA-G----------------------------GAGGG---A--------G
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47517823 68 +  47705337 C-CTGATA-T------TA----A-TGAT----TCA-T-GAAA-----CTCGTTA--AA---------TGC-AGTTGTGCA--TGTGATTCG-AAA-A-TCA-G----------------------------GAGGG---A--------G
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 71814 68 -    104429 C-CTGATA-T------TA----A-TGAT----TCA-T-GAAA-----CTCGTTA--AA---------TGC-AGTTGTGCA--TGTGATTCG-AAA-A-TCA-G----------------------------GAGGG---A--------G
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   10346 68 +     14967 C-CTGATA-T------TA----A-TGAT----TCA-T-GAAA-----CTCGTTA--AA---------TGC-AGTTGTGCA--TGTGATTCG-AAA-A-TCA-G----------------------------GAGGG---A--------G
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 6211 68 -      7628 C-CTGATA-T------TA----A-TGAT----TCA-T-GAAA-----CTCGTTA--AA---------TGC-AGTTGTGCA--TGTGATTCG-AAA-A-TCA-G----------------------------GAGGG---A--------G
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    121453 63 -    135482 C-CTGAAA-G------TG----A----G----TCA-T-GT-AAC-T-CTCATTA--CA---------TGT-AACTATACA--TATGATTTG-GGA-A-TCG-T----------------------------GAG---------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 I 4
s Perodicticus_ibeanus.k141_117958                          10882 67 -     23713 ---GGATA-T------TC----A-TGGT----CCA-T-GGAA-CAT-CTTCTGA--AA---------TAC-CACTGTGCA--TCTGAATTG-GGA-A-TCA-T----------------------------GAG-----C--------A
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           12022 67 +     61070 ---GGATA-T------TC----A-TGGT----CCA-T-GGAA-CAT-CTTCTGA--AA---------TAC-CACTGTGCA--TCTGAATTG-GGA-A-TCA-T----------------------------GAG-----C--------A
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       2296 65 +     49596 A-TGGATA-G------AA----A-TGAC-----CA-T-GCCA-C-T-ATCATCA--AA---------TGC-AGTCATGCA--TCTGA-----GAA-A-TCA-T----------------------------AAG--A-TA--------G
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4955509 70 -   8017169 G-CTGCCA-A------TG----A-TGAT----TCA-T-AGCA-C-C-ATTGTTA--AA---------TAC-AGCTGCATA--TCTGACCTG-GGA-A-TTA-T----------------------------AAC---TCT--------G
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    17351 68 -     36578 G-CTAATA-T------TA----A-CAAT----TAG-T-AGCC-C-T-TTAATTA--AA---------TAC-AGTTGTT----TCTGATTTG-AAA-A-TCA-T----------------------------GAG---GGA--------C
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              2991 67 +      8220 C-CTGATANT------TA----A-TGAT----TCA-T-GT-AAC-T-CTCACTA--AA---------TGC-AGCTGTACA--TACGATTTG-GGA-A-CCA-T----------------------------GAG---------------
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 I 2
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            99611 66 +    112873 C-TTGATA-T------GA----A-TGAT----TCA-TGGA-A-C-T-CTCATTA--AA---------TGC-AGCTGTGCA--TATAATTTA-GGA-A-CTA-T----------------------------GAG---------------
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 I 2
s Platanista_gangetica.PlaMin_flattened_line_72990           9462 67 +     21690 C-CTGATANT------TA----A-TGAT----TCA-T-GT-AAC-T-CTCACTA--AA---------TGC-AGCTGTACA--TATGATTTG-GGA-A-CCA-T----------------------------GAG---------------
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 I 2
s Plecturocebus_bernhardi.k141_959214                       26146 68 +     44506 C-CTGATA-T------TA----A-TGAT----TCA-T-GAAA-----CTCATTA--AA---------TGC-AGTTGTGCA--TCTGATTTG-AAA-A-TCA-T----------------------------GAGGG---A--------G
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        26359 68 +     67491 C-CTGATA-T------TA----A-TGAT----TCA-T-GAAA-----CACATTA--AA---------TGC-AGTTGTGCA--TCTGATTTG-AAA-A-TCA-T----------------------------GAGGG---A--------G
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      16598 68 -     98129 C-CTGATA-T------TA----A-TGAT----TCA-T-GAAA-----CTCATTA--AA---------TGC-AGTTGTGCA--TCTGATTTG-AAA-A-TCA-T----------------------------GAGGG---A--------G
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     26199 68 +    147771 C-CTGATA-T------TA----A-TGAT----TCA-T-GAAA-----CTCATTA--AA---------TGC-AGTTGTGCA--TCTGATTTG-AAA-A-TCA-T----------------------------GAGGG---A--------G
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         2834 68 -     43940 C-CTGATA-T------TA----A-TGAT----TCA-T-GAAA-----CTCATTA--AA---------TGC-AGTTGTGCA--TCTGATTTG-AAA-A-TCA-T----------------------------GAGGG---A--------G
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          6917 68 -     55515 C-CTGATA-T------TA----A-TGAT----TCA-T-GAAA-----CTCATTA--AA---------TGC-AGTTGTGCA--TCTGATTTG-AAA-A-TCA-T----------------------------GAGGG---A--------G
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         26271 68 +    152463 C-CTGATA-T------TA----A-TGAT----TCA-T-GAAA-----CTCATTA--AA---------TGC-AGTTGTGCA--TCTGATTTG-AAA-A-TCA-T----------------------------GAGGG---A--------G
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       4079 68 -    119457 C-CTGATA-T------TA----A-TGAT----TCA-T-GAAA-----CTCATTA--AA---------TGC-AGTTGTGCA--TCTGATTTG-AAA-A-TCA-T----------------------------GAGGG---A--------G
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         15994 68 +    134592 C-CTGATA-T------TA----A-TGAT----TCA-T-GAAA-----CTCATTA--AA---------TGC-AGTTGTGCA--TCTGATTTG-AAA-A-TCA-T----------------------------GAGGG---A--------G
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          26581 68 -     75465 C-CTGATA-T------TA----A-TGAT----TCA-T-GAAA-----CTCATTA--AA---------TGC-AGTTGTGCA--TCTGATTTG-AAA-A-TCA-T----------------------------GAGGG---A--------G
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              191194 68 -    373494 C-CTGATA-T------TA----A-TGAT----TCA-T-GAAA-----CTCATTA--AA---------TGC-AGTTGTGCA--TCTGATTTG-AAA-A-TCA-C----------------------------GAGGG---A--------G
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19811841 68 +  19899266 C-CTGATA-T------TA----A-TGAT----TCA-T-GAAA-----CTCATTA--AA---------TGC-AGTTGTGCA--TCTGATTTG-AAA-A-TCA-C----------------------------GAGGG---A--------G
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                4004 69 -      9567 G-CT-ATC-T------TC----A-TATT----TCA-T-GTTGTC---TTCATTA--CA---------TGC-AGGTGGGCA--TGTAACTTG-GGA-A-TCA-C----------------------------GAG---GGA--------T
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6852813 69 +  12164890 C-CTGATG-T------TA----AATGAT----TCA-T-GGAA-C-T-CTCATTA--AA---------TGC-CATTGTGCA--TCTGATTTG-GAA-A-TCA-T----------------------------GAG-----A--------G
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     21633 58 -     30946 ----------------------N-NNNN----NNN-N-NNNN-N-N-NNNNNNN--NN---------NNN-NNNNNNNNN--NNNNNNNNN-NNN-N-NNN-N----------------------------NNN-----N--------N
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         7899 69 +     11805 T-CTGATG-T------TA----A-TGAT----TCA-T-GGAA-C-T-CTCATTA--AA---------TGC-CATTGTGCA--TCTGATTTG-GGG-A-TCG-T-T--------------------------GAG-----A--------G
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           47234 68 +     52369 T-CTGATG-T------TA----A-TGAT----TCA-T-GGAA-C-T-CTCATTA--AA---------TGC-CATTGTGCA--TCTGATTTG-GGG-A-TCA-T----------------------------GAG-----A--------G
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         39621 68 -     44753 T-CTGATG-T------TA----A-TGAT----TCA-T-GGAA-C-T-CTCGTTA--AA---------TGC-CATTGTGCA--TCTGATTTG-GGG-A-TCG-T----------------------------GAG-----A--------G
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            21544 68 +     27322 T-CTGATG-T------TA----A-TGAT----TCA-T-GGAA-C-T-CTCATTA--AA---------TGC-CATTGTGCA--TCTGATTTG-GGG-A-TCA-T----------------------------GAG-----A--------G
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       21192 69 -     53241 T-CTGATG-T------TA----A-TGAT----TCA-T-GGAA-C-T-CTCATTA--AA---------TGC-CATTGTGCA--TCTGATTTG-GGG-A-TCATT----------------------------GAG-----A--------G
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         43455 69 -     48185 T-CTGATG-T------TA----A-TGAT----TCA-T-GGAA-C-T-CTCATTA--AA---------TGC-CATTGTGCA--TCTGATTTG-GGG-A-TCGTT----------------------------GAG-----A--------G
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           38299 70 +     77221 G-CTGGCA-T------TG----A-CGAT----TCA-T-AGGA-C-T-ATTATCA--AA---------CGC-AGCTACATA--TCTGACTTG-GAA-A-TGA-T----------------------------GAG--TG-T--------G
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            6158 65 -     27784 T-CTGATG-T------TA----A-TGAT----TCA-TTGA-A-C-T-CTTACTA--AG---------TGC-AGCTGTGCA---ATAATTTG-AGG-A-TCA-T----------------------------GTG---------------
i Pteronotus_parnellii.KE867983.1                       C 0 I 2
s Pteronura_brasiliensis.PteBra_flattened_line_1343        250366 63 -    344369 C-CTGGTA-C------TG----A----T----ACA-T-GT-AAC-T-CTTATTA--AA---------TGT-AGCTGTGCA--TATGATTTG-GGA-A-TCA-T----------------------------GAG---------------
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 I 7
s Puma_concolor.QAVW01000427.1                          131540077 64 - 161321710 G-CTGAAA-T------TG----A----T----TCA-T-GT-AAC-T-CTTATTA--AA---------TGTTAACTGTGCA--TATGATTTG-GGA-A-TCA-T----------------------------GAG---------------
i Puma_concolor.QAVW01000427.1                          C 0 I 4
s Rangifer_tarandus.RanTarSib_scaffold_24239                20555 62 +     68503 C-CCAATA-T------TA----A-TGAT----TCA-T-GT-AAC-T----AT-A--AA---------TGC-AGCTGCACA--TATGCTTTG-GGA-A-CCA-T----------------------------GAG---------------
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 I 2
s Rattus_norvegicus.chr11                                13917710 70 +  90463843 G-CTGGCA-C------TG----A-TGAT----TCA-C-AGGATC---GTTATCA--AA---------TGC-AGCTGCACA--TCTGACCTG-GAG-A-TGA-T----------------------------GAG--TG-T--------G
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1792669 65 +   2252614 C-CTGATA-T------TA----A-TGAT----TCA-TAGA-G-C-T-CTCATTA--AA---------TGC-AGCTGT-TA--TATAATTTG-GGA-A-TCA-T----------------------------GAG---------------
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 I 2
s Saiga_tatarica.SaiTat_scaffold_371890                       965 63 -      4338 C-CCAATA-T------TA----A-TGAT----TTG-T-GT-AAC-T----ATTA--AA---------TGC-AGCTGTACA--TATGATGTG-GGA-A-TCA-T----------------------------GAG---------------
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 I 2
s Saimiri_boliviensis.NW_024100938.1                     15676602 68 -  43202129 C-CTGATA-T------TA----A-TGAT----TCA-T-GGAA-----CTCATTA--AA---------TGC-AGTTGTGCA--TCTGCATTG-AAA-A-TAA-T----------------------------GAGGG---A--------G
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        8515 68 +     34089 C-CTGATA-T------TA----A-TGAT----TCA-T-GGAA-----CTCATTA--AA---------TGC-AGTTGTGCA--TCTGCATTG-AAA-A-TAA-T----------------------------GAGGG---A--------G
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              8455 68 -     60842 C-CTGATA-T------TA----A-TGAT----TCA-T-GGAA-----CTCATTA--AA---------TGC-AGTTGTGCA--TCTGCATTG-AAA-A-TAA-T----------------------------GAGGG---A--------G
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              8549 68 +     67014 C-CTGATA-T------TA----A-TGAT----TCA-T-GGAA-----CTCATTA--AA---------TGC-AGTTGTGCA--TCTGCATTG-AAA-A-TAA-T----------------------------GAGGG---A--------G
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              8526 68 +     60816 C-CTGATA-T------TA----A-TGAT----TCA-T-GGAA-----CTCATTA--AA---------TGC-AGTTGTGCA--TCTGCATTG-AAA-A-TAA-T----------------------------GAGGG---A--------G
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 8463 68 -     76454 C-CTGATA-T------TA----A-TGAT----TCA-T-GGAA-----CTCATTA--AA---------TGC-AGTTGTGCA--TCTGCATTG-AAA-A-TAA-T----------------------------GAGGG---A--------G
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17345249 67 -  30362882 C-CTGATA-T------TA----A-TGAT----TCA-T-GAAA-----CTCATTA--AA---------TGC-AGTTGTGCA--TCTGATCTG--AA-A-TCA-T----------------------------GAGGG---A--------G
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         24570 67 -     62485 C-CTGATA-T------TA----A-TGAT----TCA-T-GAAA-----CTCATTA--AA---------TGC-AGTTGTGCA--TCTGATCTG--AA-A-TCA-T----------------------------GAGGG---A--------G
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   39688 63 -    114521 A-CTGATG-T------TA----C-TAAT----TCA-C-AT-A-C-T-CCAGTTA--AG---------TGA-CCCTGTCCA--TATAATTTT-GGA-A-TCT-G------------------------------A---------------
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 I 2
s Sigmodon_hispidus.SigHis_scaffold_11332                  105509 70 -    120886 G-CTAGCA-T------TG----A-TGAT----TTA-T-ATAA-C-C-ATTGTTA--AA---------TGC-AGCTGTATA--TCTGACCTG-GGA-A-TTA-T----------------------------AAC---TCT--------T
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            23619 52 +    739146 --------------------------AA----TCA-T-GT-A-T-T-CTCATTA--AA---------TGC-AGTTGTGCA--TATGATATG-GAA-A-TCA-A----------------------------GAA---------------
i Solenodon_paradoxus.SolPar_flattened_line_1012        I 6 I 2
s Sorex_araneus.JH798170.1                               17770075 39 -  27805282 ---------------------------NNNNNNNN-N-NN-N-N-N-NNNNNNN--NN---------NNN-NNNNNNNNN--NNNN---------------------------------------------------------------
i Sorex_araneus.JH798170.1                              I 7 I 3650
s Spermophilus_dauricus.KZ294190.1                        2244112 70 +   2842873 A-CTGGTA-T------TA----A-TGAT----TCA-T-GGCC-C-T-CTCATCA--AA---------TGC-AGTTGAGCA--TCTGATTTG-GAA-A-TCA-T----------------------------GAG---GGA--------A
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             238880 62 -    276980 C-CTGACA-T------TG----A----T----TCA-T-GT-A-T-T-CTTATTA--AA---------TGT-AACTGTGCA--TACAATTTG-GGA-A-TCA-T----------------------------GAG---------------
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 I 5
s Suricata_suricatta.SurSur_flattened_line_20339            33268 63 +     62062 C-CGGAAA-T------TG----A----G----TCC-T-TT-ACC-T-CTTATTA--AA---------TGT-AACTCTGCA--TATGATTTG-GGA-A-TCA-T----------------------------GAG---------------
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 I 4
s Sus_scrofa.CM000824.4                                 189275053 62 + 218635234 G-CTGATA-T------TA----G-TGAT----TCA-T-GT-AA------CATTA--AA---------CAC-AGCTGTACA--TATGATTTG-GGA-C-TTA-G----------------------------GAG---------------
i Sus_scrofa.CM000824.4                                 C 0 I 2
s Symphalangus_syndactylus.tarseq_24                        18864 68 -  13920577 A-CTGATG-T------TA----A-TGAT----TTG-T-GAAA-----CTCATTA--AA---------TGC-AGTTGTGCA--TCTGATTTG-AAA-A-TCA-C----------------------------GAGGG---A--------G
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                2385 68 +     20549 C-CTGGTA-T------TA----A-TAAT----TCA-TGGA-A-C-T-TTCACTATACA---------TGC-AACTGTGCA--TATAATTTG-GGA-A-TCA-T----------------------------GAG---------------
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 I 2
s Tamandua_tetradactyla.TamTet_scaffold_26877               17347 69 +     45698 C-TTGATA-T------TC----A-TGAT----CCA-C-ATAA-C-T-CCAATGA--TA---------AGC-AGTT-TGCA--TGTGATTTG-GGG-A-CCA-A----------------------------GAG---GGA--------G
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      810849 64 +   1148477 C-CTCATA-T------TA----A-TGAT----TCA-T-GT-AA----CTCATTA--AA---------TGC-AACTGTGCA--TATGATTTG-ACA-A-TCA-C----------------------------GAG---------------
i Tapirus_indicus.TapInd_scaffold_176                   C 0 I 4
s Tapirus_terrestris.TapTer_scaffold_14939                  61491 64 +     99546 C-CTCATA-T------TA----A-TGAT----TCA-T-GT-AA----CTCATTA--AA---------TGC-AACTGTGCA--TATGATTTG-ACA-A-TCA-T----------------------------GAG---------------
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 I 4
s Theropithecus_gelada.CM009951.1                       194011984 68 - 194193292 C-CTGATA-T------TA----A-TGAT----TCA-T-GAAA-----CTCGTTA--AA---------TGC-AGTTGTGCA--TGTGATTCG-AAA-A-TCA-G----------------------------GAGGG---A--------G
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                   458 70 -      3104 C-TTGATA-T------TC----A-TGAT----CCA-C-ATAA-T-T-CCAATTA--TA---------AGC-AGTTTCACA--TGTGATTTG-GGA-A-TCA-C----------------------------AAG---GGA--------T
i Tolypeutes_matacus.TolMat_scaffold_475685             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  138152 65 -    259118 A-CTGATA-C------CA----A-TGAT----CCA-TTGA-G-C-T-GTTATAA--AG---------TGC-AGCTGTGAA---ATAATTTG-GGG-A-TCA-T----------------------------GAG---------------
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 I 2
s Trichechus_manatus.JH594618.1                          16089908 66 +  31416278 T-TT-----T------TC----A-TACT----TCA-T-GCAA-C-T-TTGATTA--TA---------TGC-AGGTGTGCA--TATAATTTG-GGA-A-TCA-T----------------------------GAG--TG-A--------T
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2795385 70 -   3938065 C-CTTGTA-C------TA----G-TGAT----TCA-T-GACA-T-T-TTTGTTA--AA---------AGC-AGTTATGTA--TGTAATTTA-GGA-G-GCA-T----------------------------GAG---GGA--------G
i Tupaia_chinensis.KB320831.1                           T 2433 I 2433
s Tupaia_tana.TupTan_flattened_line_68454                    9753 70 +     13056 C-CTTGTA-T------TA----G-TGAT----TCA-C-GAAA-T-T-TTTGTTA--AA---------AGC-AGTTATGTA--TCTAATTTA-GGA-G-GCA-C----------------------------AAG---GGA--------G
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69317253 67 -  96451834 A-CTGATANT------TA----A-TGAT----TCA-T-GT-AAC-T-CTCACTA--AA---------TGC-AGCTGTACA--TACGATTTG-GGA-A-CCA-T----------------------------GAG---------------
i Tursiops_truncatus.MRVK01000923.1                     C 0 I 2
s Uropsilus_gracilis.UroGra_scaffold_4115                     155 61 +    136657 T-CTGATA-T------TA----A-TTAT----TCA-T-GT-A-C-T-CTCATTA--AA---------TGG-AGGTGTAC----ATGATTTG-GGA-A-TCT-G------------------------------A---------------
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 I 2
s Ursus_maritimus.KK498671.1                              6520782 63 +  28682327 C-CTGATA-T------TG----A----T----TCA-T-GT-AAC-T-CTTATTA--AA---------TGT-AGCTGTGCA--TATGATTTG-GGA-A-TCA-T----------------------------GAG---------------
i Ursus_maritimus.KK498671.1                            C 0 I 7
s Varecia_rubra.k141_432109                                  9456 69 -     20643 C-CTGATG-T------TA----AATGGT----TCA-T-GGAA-C-T-CTCATTA--AA---------TGC-CATTGTGCA--TTTGATTTG-GAA-A-TCA-T----------------------------GAG-----A--------G
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             28991 69 -     33872 C-CTGATG-T------TA----AATGGT----TCA-T-GGAA-C-T-CTCATTA--AA---------TGC-CATTGTGCA--TTTGATTTG-GAA-A-TCA-T----------------------------GAG-----A--------G
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1528293 65 -   2331223 C-CTGATA-T------AA----A-TGAC----TCA-T-GT-AAT-T-CTCATTA--AA----------AC-AGCTGTGCA--TATAATTTG-GCA-C-TCA-T----------------------------GAG---------------
i Vicugna_pacos.KN269600.1                              C 0 I 2
s Vulpes_lagopus.VulLag_flattened_line_2045                144465 63 -    281493 C-CTGATA-T------TG----A----T----TCA-T-GT-AAC-T-CTTATTA--AA---------TGT-AGCCGTGCA--TATGATTTG-GGA-A-TCA-T----------------------------GAG---------------
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 I 4
s Xerus_inauris.XerIna_scaffold_7898                       131608 70 -    134049 C-CTGGTA-T------TA----A-TGAT----TCA-T-GGCA-C-T-CTCATCA--AA---------TGC-AGTTGAGCA--TCTGATTTG-GAA-A-TCA-T----------------------------AAG---GGA--------G
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        219935 63 -    227762 C-CTGACA-T------TG----A----T----TCA-C-GT-GGC-T-CTTATTA--AA---------TGT-AGCTGTGCA--TATGATTTG-GTA-A-TCA-C----------------------------GAG---------------
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 I 7
s Ziphius_cavirostris.ZipCav_flattened_line_60625            2001 67 -     13665 C-CTGATANT------TA----A-TGAT----TCA-T-GT-ACC-T-CTCACTA--AA---------TGC-AGCTGTACA--TATGATTTG-GGA-A-CCA-T----------------------------GAG---------------
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 I 2
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Ochotona_princeps.JH802095.1                            4999348 675 -  23139505 I
e Tragulus_javanicus.TraJav_scaffold_14717                   9488 743 +     90398 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Equus_przewalskii.ATBW01073585.1                          16581  0 +     92910 C
e Equus_caballus.CM000402.2                              13355091  0 +  41866177 C
e Equus_asinus.JREZ01000062.1                             5856591  0 -   7175178 C
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Zapus_hudsonius.ZapHud_scaffold_256618                      408  0 -      2259 C
e Jaculus_jaculus.JH725517.1                              8577673  0 +  11848649 C
e Allactaga_bullata.AllBul_scaffold_141108                    666  0 -      7259 C
e Trachypithecus_pileatus.k141_1022309                       5226  0 +     13828 C
e Trachypithecus_phayrei.ctg3                            44662914  0 -  44834318 C
e Trachypithecus_obscurus.k141_1115109                       8130  0 -     28054 C
e Trachypithecus_melamera.k141_699241                        2986  0 -     24393 C
e Trachypithecus_leucocephalus.k141_381681                   3005  0 +     12481 C
e Trachypithecus_laotum.k141_760702                          4719  0 +     14371 C
e Trachypithecus_hatinhensis.k141_504423                     6067  0 -     15592 C
e Trachypithecus_germaini.k141_868450                        3883  0 -     11566 C
e Trachypithecus_geei.k141_670367                           46082  0 -     54611 C
e Trachypithecus_francoisi.k141_768164                       4689  0 -     14244 C
e Trachypithecus_cristatus.k141_1011511                      5261  0 -     12939 C
e Trachypithecus_crepusculus.k141_1588528                   23360  0 -     32910 C
e Trachypithecus_auratus.k141_738098                        29800  0 +     38948 C
e Tarsius_wallacei.k141_48636                               64696  0 +     65473 C
e Tarsius_lariang.k141_609102                               31387  0 +     42269 C
e Semnopithecus_vetulus.k141_1143185                        16479  0 +     30600 C
e Semnopithecus_schistaceus.k141_387461                     33457  0 +     42640 C
e Semnopithecus_priam.k141_410937                           40312  0 +     46263 C
e Semnopithecus_johnii.k141_785014                         121532  0 +    130994 C
e Semnopithecus_hypoleucos.k141_761524                      11528  0 +     20762 C
e Semnopithecus_entellus.k141_1572367                        6153  0 +     15331 C
e Rhinopithecus_strykeri.ctg4                            44859307  0 -  45163003 C
e Rhinopithecus_bieti.k119_554384                            2917  0 -     17045 C
e Pygathrix_nigripes_a.k141_101123                             8537  0 +     18040 C
e Pygathrix_nigripes_b.ctg79                                 6809148  0 +   6970761 C
e Pygathrix_cinerea.k141_374971                             32651  0 +     56732 C
e Presbytis_mitrata.k141_860013                              8661  0 +     14865 C
e Presbytis_comata.k141_672698                               8546  0 -     15069 C
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000036.1               26743271  0 +  26888534 C
e Piliocolobus_kirkii.k141_929665                            4788  0 +      7694 C
e Piliocolobus_gordonorum.k141_1270531                       5421  0 -     17985 C
e Piliocolobus_badius.k141_1987485                           4802  0 -      5908 C
e Nasalis_larvatus.k141_153429                              11264  0 +     48152 C
e Colobus_polykomos.k141_1406057                            19335  0 +     23629 C
e Colobus_guereza.LG08                                  147667351  0 + 156195979 C
e Colobus_angolensis.KN985967.1                          10889423  0 +  10971483 C
e Cephalopachus_bancanus.k141_702587                        12545  0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530  0 +    345090 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               17655 32 +    209709 A-TTT-T---T-GG-TC----AGAT-ATG--CAT-A------G-----------CA-AATCT--------A---TG
s Acinonyx_jubatus.LLWD01000356.1                         2039619 31 +   3721120 A-TTT-T---T-GG-TC----AGGT-ATT--CCT-A------G-----------CA-GCCTT--------G---T-
i Acinonyx_jubatus.LLWD01000356.1                       I 4 I 9
s Acomys_cahirinus.AcoCah_scaffold_1625                    117882 14 -    189883 G-CTT-T---T-GG-TC----ATAT---------------------------------------------------
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 I 14
s Ailuropoda_melanoleuca.LNAT01000321.1                  10663579 27 +  23371972 -------------G-TTAGTCAGgt--tt--cat-a------g-----------ca-gcttt--------a---t-
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 7 I 6
s Ailurus_fulgens.LNAC01000003.1                          7100112 23 -  16596857 -------------G-TT----AGgt--tt--cat-a------g-----------ca-gcttt--------a---t-
i Ailurus_fulgens.LNAC01000003.1                        I 7 I 6
s Allenopithecus_nigroviridis.k141_2469532                   5528 32 -     60446 A-TTT-T---T-GG-TC----AGAT-ATG--CAT-A------G-----------CA-AACCT--------A---TG
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         6245 32 -     29318 A-TTT-T---T-GG-TC----AGAT-ATG--CAC-A------G-----------CA-AACCT--------A---TG
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         5183 32 +     38766 A-TTT-T---T-GG-TC----AGAT-ATG--CAC-A------G-----------CA-AACCT--------A---TG
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          6139 32 -     80423 A-TTT-T---T-GG-TC----AGAT-ATG--CAT-A------G-----------CA-AACCT--------A---TG
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              1112 42 +     19852 A-TTT-T---T-G--TC----AGAT-ATG--CAC-A------GACATATGTCCCTA-GACAT--------A---TG
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                3367 31 -     12443 A-TTT-T---T-G--TC----AGAT-ATG--CAC-A------G-----------CA-AATCT--------A---TG
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                              666 31 +      5070 A-TTT-T---T-G--TC----AGAT-ATG--CAC-A------G-----------CA-AATCT--------A---TG
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                  411 31 -      1641 A-TTT-T---T-G--TC----AGAT-ATG--CAC-A------G-----------CA-AATCT--------A---TG
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          3150 31 -     24210 A-TTT-T---T-G--TC----AGAT-ATG--CAC-A------G-----------CA-AATCT--------A---TG
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           29732 31 -     30219 A-TTT-T---T-G--TC----AGAT-ATG--CAC-A------G-----------CA-AATCT--------A---TG
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_405616                              5568 31 +     16794 A-TTT-T---T-G--TC----AGAT-ATG--CAC-A------G-----------CT-AATCT--------A---TG
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                             700 31 -      1470 A-TTT-T---T-G--TC----AGAT-ATG--CAC-A------G-----------CA-AATCT--------A---TG
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             4845 31 -      9835 A-TTT-T---T-G--TC----AGAT-ATG--CAC-A------G-----------CA-AATCT--------A---TG
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3525628 33 +   4113121 AGATT-T---T-CA-TC----AGGT-ATT--CAT-A------C-----------CA-ATCTT--------A---TG
i Ammotragus_lervia.NIVO01013474.1                      I 2 I 8
s Anoura_caudifer.AnoCau_scaffold_422                      392662 33 -    631301 AGATT-T---T-GG-TC----AACT-ACT--CAC-A------G-----------CA-ACCTT--------A---TG
i Anoura_caudifer.AnoCau_scaffold_422                   I 2 I 8
s Antilocapra_americana.AntAmePen_scaffold_27338             3059 33 +     55446 AGCTT-T---T-CA-TC----AGTC-ATT--TAT-A------C-----------CA-ACCTT--------A---TG
i Antilocapra_americana.AntAmePen_scaffold_27338        I 2 I 8
s Aotus_azarae.k141_3170768                                 66458 31 +     78111 A-TTT-T---T-GG-TC----AGAT-AT---CAT-A------G-----------CA-AATCT--------G---TG
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            9404 31 +     22701 A-TTT-T---T-GG-TC----AGAT-AT---CAT-A------G-----------CA-AATCT--------G---TG
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5753362 31 +   9889416 A-TTT-T---T-GG-TC----AGAT-AT---CAT-A------G-----------CA-AATCT--------G---TG
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             9960 31 -    104377 A-TTT-T---T-GG-TC----AGAT-AT---CAT-A------G-----------CA-AATCT--------G---TG
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               9967 31 +     23246 A-TTT-T---T-GG-TC----AGAT-AT---CAT-A------G-----------CA-AATCT--------G---TG
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     2494 30 +     11424 T-TTT-T---T-GG-TC----AGAC-ATT--CGT-A------G-----------CA-AC--T--------A---TG
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 I 8
s Arctocebus_calabarensis.k141_587554                        6576 32 +      9265 A-CTT-T---T-GG-TC----TAAA-ATT--TAT-A------G-----------CA-ATTCT--------C---TA
i Arctocebus_calabarensis.k141_587554                   C 0 I 8
s Artibeus_jamaicensis.ArtJam_scaffold_41619                11087 33 -     29036 AGATT-T---C-GG-TC----AACT-ACT--CAC-A------G-----------CA-ACCTT--------C---TG
i Artibeus_jamaicensis.ArtJam_scaffold_41619            I 2 I 8
s Ateles_geoffroyi_b.tarseq_2582                             9543253 31 +  39197703 A-TTT-T---T-G--TC----AGAT-ATA--CAT-A------G-----------CA-AATCT--------A---TG
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             64527 31 +     85812 A-TTT-T---T-G--TC----AGAT-ATA--CAT-A------G-----------CA-AATCT--------A---TG
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                15540 31 +     89302 A-TTT-T---T-G--TC----AGAT-ATA--CAT-A------G-----------CA-AATCT--------A---TG
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             20041 31 -     58268 A-TTT-T---T-G--TC----AGAT-ATA--CAT-A------G-----------CA-AATCT--------A---TG
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             68035 31 +    119057 A-TTT-T---T-G--TC----AGAT-ATA--CAT-A------G-----------CA-AATCT--------A---TG
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              10004 31 -     25888 A-TTT-T---T-G--TC----AGAT-ATA--CAT-A------G-----------CA-AATCT--------A---TG
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                11060 32 -     16375 A-CTT-T---T-GG-TC----AGAT-ATT--CAT-A------G-----------CA-ACTCT--------A---TA
i Avahi_laniger.k141_2840928                            C 0 I 8
s Avahi_peyrierasi.k141_798820                               4676 32 +      6337 A-CTT-T---T-GG-TC----AGAT-ATT--CAT-A------G-----------CA-ACTCT--------A---TA
i Avahi_peyrierasi.k141_798820                          C 0 I 8
s Balaenoptera_acutorostrata.KI537095.1                  26384112 34 +  51448160 AGATT-T---TTGG-CC----AGGT-ATG--CAC-A------G-----------CA-ACCTT--------A---CA
i Balaenoptera_acutorostrata.KI537095.1                 I 2 I 8
s Balaenoptera_bonaerensis.DF502048.1                        9285 34 -     13118 AGATT-T---TTGG-CC----AGGT-ATG--CAC-A------G-----------CA-ACCTT--------A---CA
i Balaenoptera_bonaerensis.DF502048.1                   I 2 I 8
s Beatragus_hunteri.BeaHun_scaffold_21644                   48090 33 -     72089 AGATT-T---T-CA-TC----AGGT-ATT--CAT-A------C-----------TA-ACCTT--------A---TG
i Beatragus_hunteri.BeaHun_scaffold_21644               I 2 I 8
s Bison_bison.KN264915.1                                   302234 33 -   6870073 AGATT-T---T-CA-TC----AGGT-ATT--CGT-A------C-----------CA-ACCTT--------A---TG
i Bison_bison.KN264915.1                                I 2 I 8
s Bos_indicus.CM003021.1                                 22956332 33 + 161108492 AGATT-T---T-CA-TC----AGGT-ATT--CGT-A------C-----------CA-ACCTT--------A---TG
i Bos_indicus.CM003021.1                                I 2 I 8
s Bos_mutus.JH883513.1                                     418597 33 +    998990 AGATT-T---T-CA-TC----AGGT-ATT--CGT-A------C-----------CA-ACCTT--------A---TG
i Bos_mutus.JH883513.1                                  I 2 I 8
s Bos_taurus.CM000177.6                                  22664986 33 + 158972876 AGATT-T---T-CA-TC----AGGT-ATT--CGT-A------C-----------CA-ACCTT--------A---TG
i Bos_taurus.CM000177.6                                 I 2 I 8
s Bubalus_bubalis.KI419065.1                               674750 33 +   1914593 AGATT-T---T-CA-TC----AGGT-ATT--CGT-A------C-----------CA-ACCTT--------A---TG
i Bubalus_bubalis.KI419065.1                            I 2 I 8
s Cacajao_ayresi.k141_724503                               117907 31 -    171031 A-TTT-T---T-G--TC----ATAC-AT--GCAT-A------G-----------CA-AATCT--------A---TG
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 16927 31 +    125063 A-TTT-T---T-G--TC----ACAC-AT--GCAT-A------G-----------CA-AATCT--------A---TG
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                18974 31 -    216513 A-TTT-T---T-G--TC----ATAC-AT--GCAT-A------G-----------CA-AATCT--------A---TG
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       11517 31 -    134917 A-TTT-T---T-G--TC----ATAC-AT--GCAT-A------G-----------CA-AATCT--------A---TG
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3223252 31 -   8989139 AGATT-T-T-T-GG-TC----AAGT-ATT--CAT-A------G-----------CA-ATCTT--------------
i Camelus_bactrianus.KN276303.1                         I 2 I 1
s Camelus_dromedarius.KN271192.1                           400953 31 -  15254737 AGATT-T-T-T-GG-TC----AAGT-ATT--CAT-A------G-----------CA-ATCTT--------------
i Camelus_dromedarius.KN271192.1                        I 2 I 1
s Camelus_ferus.KB016973.1                                2976690 31 +   6889770 AGATT-T-T-T-GG-TC----AAGT-ATT--CAT-A------G-----------CA-ATCTT--------------
i Camelus_ferus.KB016973.1                              I 2 I 1
s CanFam4.chr31                                          11526452 31 +  39901454 A-TTT-T---T-AG-TC----AGGC-GTT--CAT-A------G-----------TA-GCTTT--------G---T-
i CanFam4.chr31                                         I 4 I 6
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   21426 31 +     87036 A-TTT-T---T-AG-TC----AGGC-GTT--CAT-A------G-----------TA-GCTTT--------G---T-
i Canis_lupus_VD.CanFam_VD_scaffold_16982               I 4 I 6
s Canis_lupus_dingo.QKWQ01001993.1                       11273135 31 -  35597290 A-TTT-T---T-AG-TC----AGGC-GTT--CAT-A------G-----------TA-GCTTT--------G---T-
i Canis_lupus_dingo.QKWQ01001993.1                      I 4 I 6
s Canis_lupus_familiaris.chr31                           11095846 31 +  39895921 A-TTT-T---T-AG-TC----AGGC-GTT--CAT-A------G-----------TA-GCTTT--------G---T-
i Canis_lupus_familiaris.chr31                          I 4 I 6
s Canis_lupus_orion.HG994411.1                           16462631 31 -  44759192 A-TTT-T---T-AG-TC----AGGC-GTT--CAT-A------G-----------TA-GCTTT--------G---T-
i Canis_lupus_orion.HG994411.1                          I 4 I 6
s Capra_aegagrus.CM003214.1                              21333570 33 + 157394656 AGATT-T---T-CA-TC----AGGT-ATT--CAT-A------C-----------TA-ACCTT--------A---TG
i Capra_aegagrus.CM003214.1                             I 2 I 8
s Capra_hircus.CM004562.1                               135711925 33 - 157403528 AGATT-T---T-CA-TC----AGGT-ATT--CAT-A------C-----------TA-ACCTT--------A---TG
i Capra_hircus.CM004562.1                               I 2 I 8
s Capromys_pilorides.CapPil_scaffold_529800                   314 32 -      2320 A-CTT-T---T-GG-AT----AAAT-AGG--CAT-A------G-----------CA-CGTCC--------A---TG
i Capromys_pilorides.CapPil_scaffold_529800             C 0 I 8
s Carollia_perspicillata.CarPer_scaffold_4436               62080 33 +     67245 AGATT-T---T-GG-TC----AACT-ACT--CAC-A------G-----------CA-ATCTT--------C---TG
i Carollia_perspicillata.CarPer_scaffold_4436           I 2 I 8
s Castor_canadensis.CasCan_scaffold_417865                    287 32 -       402 A-TTT-T---T-GG-TC----AGAT-ATT--CAT-A------G-----------CA-GCTCT--------A---TG
i Castor_canadensis.CasCan_scaffold_417865              C 0 I 8
s Catagonus_wagneri.CatWag_scaffold_1305                   162762 34 -    276539 ATAAC-T---T-CGATG----AGGT-ATA--CAT-A------G-----------GA-AGCTT--------A---TG
i Catagonus_wagneri.CatWag_scaffold_1305                I 2 I 8
s Cavia_aperea.AVPZ01000278.1                            15789782 32 -  24422027 A-TCT-T---T-GT-TT----AGAT-ATT--CAT-A------G-----------AA-ACTCT--------G---TG
i Cavia_aperea.AVPZ01000278.1                           C 0 I 8
s Cavia_porcellus.DS562889.1                             15801721 32 -  24440124 A-TCT-T---T-GT-TT----AGAT-ATT--CAT-A------G-----------AA-ACTCT--------G---TG
i Cavia_porcellus.DS562889.1                            C 0 I 8
s Cavia_tschudii.CavTsc_scaffold_488                       179893 32 +    436027 A-TCT-T---T-GT-TT----AGAT-ATT--CAT-A------G-----------AA-ACTCT--------G---TG
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 I 8
s Cebus_albifrons.Contig22                               18895628 32 -  29618158 A-TTT-T---T-GG-TC----AGAT-ATG--CAT-A------G-----------CA-AATCT--------A---TG
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                12278 32 -     26817 A-TTT-T---T-GG-TC----AGAT-ATG--CAT-A------G-----------CA-AATCT--------A---TG
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                16522 32 +     25043 A-TTT-T---T-GG-TC----AGAT-ATG--CAT-A------G-----------CA-AATCT--------A---TG
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4367684 32 +   7569818 A-TTT-T---T-GG-TC----AGGT-ATT--TGT-A------G-----------AA-ACCTT--------A---TG
i Ceratotherium_simum.JH767818.1                        I 4 I 8
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         7441 32 -      9338 A-TTT-T---T-GG-TC----AGGT-ATT--TGT-A------G-----------AA-ACCTT--------A---TG
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    I 4 I 8
s Cercocebus_atys.KQ010443.1                              6559469 32 +   6739814 A-TTT-T---T-GG-TC----AGAT-ATG--CAT-A------G-----------CA-AACCT--------A---TG
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      30946 32 +     60454 A-TTT-T---T-GG-TC----AGAT-ATG--CAT-A------G-----------CA-AACCT--------A---TG
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          6150 32 -     21101 A-TTT-T---T-GG-TC----AGAT-ATG--CAT-A------G-----------CA-AACCT--------A---TG
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         63460 32 -    107033 A-TTT-T---T-GG-TC----AGAT-ATG--CAT-A------G-----------CA-AACCT--------A---TG
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        6323 32 -     17608 A-TTT-T---T-GG-TC----AGAT-ATG--CAT-A------G-----------CA-AACCT--------A---TG
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          3488 32 +     45019 A-TTT-T---T-GG-TC----AGAT-ATG--CAT-A------G-----------CA-AACCT--------A---TG
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           3764 32 +     15177 A-TTT-T---T-GG-TC----AGAT-ATG--CAT-A------G-----------CA-AACCT--------A---TG
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          6370 32 +     16677 A-TTT-T---T-GG-TC----AGAT-ATG--CAT-A------G-----------CA-AACCT--------A---TG
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           28560 32 +     35983 A-TTT-T---T-GG-TC----AGAT-ATG--CAT-A------G-----------CA-AACCT--------A---TG
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11995091 32 +  12117833 A-TTT-T---T-GG-TC----AGAT-ATG--CAT-A------G-----------CA-AACCT--------A---TG
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46482067 32 +  46592721 A-TTT-T---T-GG-TC----AGAT-ATG--CAT-A------G-----------CA-AACCT--------A---TG
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                        184 32 -     27215 A-TTT-T---T-GG-TC----AGAT-ATG--CAT-A------G-----------CA-AACCT--------A---TG
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       6384 32 +     35577 A-TTT-T---T-GG-TC----AGAT-ATG--CAT-A------G-----------CA-AACCT--------A---TG
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        6178 32 -     25661 A-TTT-T---T-GG-TC----AGAT-ATG--CAT-A------G-----------CA-AACCT--------A---TG
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        6350 32 -     17744 A-TTT-T---T-GG-TC----AGAT-ATG--CAT-A------G-----------CA-AACCC--------A---TG
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        25719 32 +     37128 A-TTT-T---T-GG-TC----AGAT-ATG--CAT-A------G-----------CA-AACCT--------A---TG
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           4688 25 -      6963 A-TTT-T---T-GA-AT----AGCA-ACC--CTC-T------G-----------TT-G------------------
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 I 5
s Cheirogaleus_major.k141_1157592                           63285 32 -     68416 A-CTT-T---T-GC-TC----AGAT-ATT--CAT-A------A-----------TA-ACTCT--------A---TT
i Cheirogaleus_major.k141_1157592                       C 0 I 8
s Cheirogaleus_medius.k141_133808                           12391 32 +     13308 A-CTT-T---T-GC-TT----AGAT-ATT--CAT-A------A-----------TA-ACTCT--------A---TA
i Cheirogaleus_medius.k141_133808                       C 0 I 8
s Cheracebus_lucifer.k141_619653                             9565 32 -     18223 A-TTT-T---T-GG-TC----AGAT-AT--GCAC-A------G-----------CA-AATCT--------A---TG
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              1303 32 +    188999 A-TTT-T---T-GG-TC----AGAT-AT--GCAC-A------G-----------CA-AATCT--------A---TG
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           45602 32 +     57117 A-TTT-T---T-GG-TC----AGAT-AT--GCAC-A------G-----------CA-AATCT--------A---TG
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          50282 32 +     54541 A-TTT-T---T-GG-TC----AGAT-AT--GCAC-A------G-----------CA-AATCT--------A---TG
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15964467 32 +  43084221 A-CTT-T---T-GG-TT----AGAT-ACT--CAT-A------C-----------CC-ACTCT--------A---CA
i Chinchilla_lanigera.JH721867.1                        C 0 I 8
s Chiropotes_israelita.k141_1189915                         75086 31 +    196370 A-TTT-T---T-G--TC----ATAC-AT--GCAT-A------G-----------CA-AATCT--------A---TG
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          19267 31 +     40510 A-TTT-T---T-G--TC----ATAC-AT--GCAT-A------G-----------CA-AATCT--------A---TG
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15143904 32 -  15256731 A-TTT-T---T-GG-TC----AGAT-ATG--CAT-A------G-----------CA-AACCT--------A---TG
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      38368 32 -     53260 A-TTT-T---T-GG-TC----AGAT-ATG--CAT-A------G-----------CA-AACCT--------A---TG
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101148927 32 + 101219884 A-TTT-T---T-GG-TC----AGAT-ATG--CAT-A------G-----------CA-AACCT--------A---TG
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                18795 25 -     21363 A-ACT-T---T-GG-TC----AGCT-ATT--CAT-A------G-----------CA-A------------------
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 I 7
s Choloepus_hoffmanni.KN194586.1                           764099 25 +    964067 A-ACT-T---T-GG-TC----AGCT-ATT--CAT-A------G-----------CA-A------------------
i Choloepus_hoffmanni.KN194586.1                        C 0 I 7
s Chrysochloris_asiatica.ChrAsi_scaffold_629495              2337 25 -      3120 A-TTT-T---T-GG-TT----ATAT-ATT--CAG-A------G-----------AA-A------------------
i Chrysochloris_asiatica.ChrAsi_scaffold_629495         C 0 I 5
s Condylura_cristata.JH655880.1                          60622292 31 +  78930452 --TTT-T---G-GA-TC----AAGT-ATT--CGT-A------G-----------GA-AATTT--------A---TG
i Condylura_cristata.JH655880.1                         I 30 I 13
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         2619 34 -      5782 AGATTTT---T-GG-TG----AGCC-AAT--CAT-A------G-----------CA-ACCTT--------A---TG
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    I 2 I 8
s Cricetomys_gambianus.CriGam_scaffold_949                 282756 32 -    399297 G-TTT-T---T-GG-CC----AAAT-TTT--CAT-A------G-----------CA-ATTCT--------G---TT
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 I 8
s Cricetulus_griseus.LT883672.1                          53035126 32 +  72327488 t-ttt-t---t-gg-tC----TGAT-TTC--CAC-A------G-----------CA-ATTCT--------G---TT
i Cricetulus_griseus.LT883672.1                         C 0 I 8
s Crocidura_indochinensis.CroInd_scaffold_27484              1997 32 -     22648 ----------------T----ATGT-GTA--CTC-A------G-----------GATACCATACCCTAATA---CA
i Crocidura_indochinensis.CroInd_scaffold_27484         I 302 I 37
s Cryptoprocta_ferox.CryFer_flattened_line_19014            57605 31 -     70449 A-TTT-T---T-GA-TC----AGGT-AAT--CCT-A------G-----------TG-GCTTT--------A---T-
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 4 I 9
s Ctenodactylus_gundi.CteGun_scaffold_447                  214373 27 -    956709 T-TTT-T---G-GG-TT----AAAA-GTT--CAC-A------G-----------AA-ATT----------------
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 I 10
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 34434 32 -     67205 A-CTT-T---T-GG-AT----AAAT-AGT--CAT-A------G-----------CA-AACCC--------A---TG
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 I 8
s Cuniculus_paca.CunPac_flattened_line_16637                20954 32 +     26546 G-TTT-T---T-GG-TT----AGAT-ATT--TAT-A------G-----------CA-ACTCT--------A---TG
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 I 8
s Dasyprocta_punctata.DasPun_flattened_line_634             62094 32 -    236241 A-TTT-T---T-GC-TT----AAAT-ATT--CAT-A------G-----------CA-ACTCT--------A---CG
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 I 8
s Dasypus_novemcinctus.JH568778.1                          185769 25 -   6883506 A-TTT-T---T-GA-AT----AGCA-ATC--CTC-T------A-----------TC-A------------------
i Dasypus_novemcinctus.JH568778.1                       C 0 I 5
s Daubentonia_madagascariensis.ctg11                     16849220 32 +  31942871 A-CTT-T---T-GG-TC----AGAT-ATT--CAT-A------G-----------AA-ACTCT--------A---TA
i Daubentonia_madagascariensis.ctg11                    C 0 I 8
s Delphinapterus_leucas.KZ290064.1                       80040735 34 -  96802777 AGATT-T---CTGG-CC----AGGT-ATT--CAC-A------G-----------CA-ACCTT--------A---CA
i Delphinapterus_leucas.KZ290064.1                      I 2 I 8
s Desmodus_rotundus.KZ672188.1                           18701296 32 -  18957592 AGATC-T---C-GG-TC----AGCT-AC---CAC-A------G-----------CA-ACCTT--------A---TG
i Desmodus_rotundus.KZ672188.1                          I 2 I 8
s Dicerorhinus_sumatrensis.PEKH010003161.1                 326331 32 +    993696 A-TTT-T---T-GG-TC----AGGT-ATT--CGT-A------G-----------AA-ACCAT--------A---TG
i Dicerorhinus_sumatrensis.PEKH010003161.1              I 4 I 10
s Diceros_bicornis.DicBicMic_scaffold_9545                   6972 32 +    151128 A-TTT-T---T-GG-TC----AGGT-ATT--CGT-A------G-----------AA-ACCTT--------A---TG
i Diceros_bicornis.DicBicMic_scaffold_9545              I 4 I 8
s Dinomys_branickii.DinBra_scaffold_1996                   159729 32 +    228994 A-CTT-T---T-GT-TT----AGAT-ACT--CAT-A------C-----------CA-ACTCT--------A---TG
i Dinomys_branickii.DinBra_scaffold_1996                C 0 I 8
s Dipodomys_ordii.KN672545.1                              3660443 33 +   4240102 A-TTTGT---T-TA-TC----AGAT-AGT--GAT-A------G-----------CA-ACTCT--------A---TG
i Dipodomys_ordii.KN672545.1                            C 0 I 8
s Dipodomys_stephensi.DipSte_scaffold_84338                  2797 33 -     11986 A-TTTGT---T-TA-TC----AGAT-AGT--GAT-A------G-----------CA-ACTCT--------A---TG
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 I 8
s Dolichotis_patagonum.DolPat_scaffold_14102                40677 32 -     73477 a-TCT-T---T-GG-TT----AGAT-ATT--CAC-A------G-----------CA-ACTGT--------A---TG
i Dolichotis_patagonum.DolPat_scaffold_14102            I 616 I 8
s Echinops_telfairi.JH980316.1                           23000003 26 -  44670279 a-tta-a---a-tg-tc----caac-gtt--cacgt------g-----------cA-A------------------
i Echinops_telfairi.JH980316.1                          C 0 I 5
s Elaphurus_davidianus.JRFZ01086400.1                     1496306 33 +   1727528 AGATT-T---T-CA-TC----AGGT-ATT--CAC-A------C-----------CA-ACCTT--------A---TG
i Elaphurus_davidianus.JRFZ01086400.1                   I 2 I 8
s Elephantulus_edwardii.JH947210.1                        7833056 25 +  15467074 T-GTT-T---T-AA-TC----AGAT-ATT--CAT-A------A-----------CA-A------------------
i Elephantulus_edwardii.JH947210.1                      C 0 I 5
s Ellobius_lutescens.LOEQ01003611.1                        243925 31 -    369425 G-TT--T---T-GG-TC----AGAT-TTT--CAT-A------G-----------CA-ATTCT--------A---TT
i Ellobius_lutescens.LOEQ01003611.1                     C 0 I 8
s Enhydra_lutris.KZ291749.1                              85877576 23 +  99434291 -------------G-TT----AGgt--tt--cat-a------g-----------ca-gcttt--------a---t-
i Enhydra_lutris.KZ291749.1                             I 7 I 6
s Eptesicus_fuscus.JH977687.1                             4709054 33 +   6522550 AGATT-T---T-GG-TC----AGGT-GTT--CAT-A------G-----------CA-ATCTT--------A---TG
i Eptesicus_fuscus.JH977687.1                           I 2 I 8
s Erinaceus_europaeus.JH835290.1                         11541401 32 +  16010500 A-TTT-T---T-GG-TC----AGGT-ATT--TAC-G------G-----------CA-AATTT--------A---TC
i Erinaceus_europaeus.JH835290.1                        I 2 I 14
s Erythrocebus_patas.Contig8                             48780937 32 -  48907691 A-TTT-T---T-GG-TC----AGAT-ATG--CAT-A------G-----------CA-AACCT--------A---TG
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          318955 34 +    330699 AGATT-T---TTGG-CC----AGGT-ATG--CAC-A------G-----------CA-ACCTT--------A---CA
i Eschrichtius_robustus.EscRob_flattened_line_685       I 2 I 8
s Eubalaena_japonica.EubJap_flattened_line_7756             65412 34 +     89355 AGATT-T---TTGG-CT----AGGT-ATG--CAC-A------G-----------CA-ACCTT--------A---CA
i Eubalaena_japonica.EubJap_flattened_line_7756         I 2 I 8
s Eulemur_albifrons.k141_59549                                468 32 +      1101 A-CTT-T---T-GG-TC----AGAT-ATT--CAT-A------G-----------CA-ACTCT--------A---TA
i Eulemur_albifrons.k141_59549                          C 0 I 173
s Eulemur_collaris.k141_1015201                              2641 26 -      4292 ------------GG-TC----AGAT-ATT--CAT-A------G-----------CA-ACTCT--------A---TA
i Eulemur_collaris.k141_1015201                         I 5 I 8
s Eulemur_coronatus.k141_3240342                            15769 32 +     36558 A-CTT-T---T-GG-TC----AGAT-ATT--CAT-A------G-----------CA-ACTCT--------A---TA
i Eulemur_coronatus.k141_3240342                        C 0 I 8
s Eulemur_flavifrons.k141_903901                            12094 32 +     60246 A-CTT-T---T-GG-TC----AGAT-ATT--CAT-A------G-----------CA-ACTCT--------A---TA
i Eulemur_flavifrons.k141_903901                        C 0 I 8
s Eulemur_fulvus.k141_653297                                15577 31 +    109717 A-C-T-T---T-GG-TC----AGAT-ATT--CAT-A------G-----------CA-ACTCT--------A---TA
i Eulemur_fulvus.k141_653297                            C 0 I 8
s Eulemur_macaco.k141_747087                                 3562 32 -     19505 A-CTT-T---T-GG-TC----AGAT-ATT--CAT-A------G-----------CA-ACTCT--------A---TA
i Eulemur_macaco.k141_747087                            C 0 I 8
s Eulemur_mongoz.k141_825972                                20235 31 +     27497 A-C-T-T---T-GG-TC----AGAT-ATT--CAT-A------G-----------CA-ACTCT--------A---TA
i Eulemur_mongoz.k141_825972                            C 0 I 8
s Eulemur_rubriventer.k141_411740                           22690 32 +     26808 A-CTT-T---T-GG-TC----AGAT-ATT--CAT-A------G-----------CA-ACTCT--------A---TA
i Eulemur_rubriventer.k141_411740                       C 0 I 8
s Eulemur_rufus.k141_1620292                                37425 32 +     46535 A-CTT-T---T-GG-TC----AGAT-ATT--CAT-A------G-----------CA-ACTCT--------A---TA
i Eulemur_rufus.k141_1620292                            C 0 I 8
s Eulemur_sanfordi.k141_186399                              20164 31 -     29447 A-C-T-T---T-GG-TC----AGAT-ATT--CAT-A------G-----------CA-ACTCT--------A---TA
i Eulemur_sanfordi.k141_186399                          C 0 I 8
s Felis_catus.AANG03133801.1                                  658 33 -       736 A-TTT-T---TTGG-TC----AGGTTATT--CCT-A------G-----------CA-GCTTT--------G---T-
i Felis_catus.AANG03133801.1                            I 4 I 9
s Felis_catus_fca126.CM031420.1                         129286014 31 - 158578461 A-TTT-T---T-GG-TC----AGGT-ATT--CCT-A------G-----------CA-GCTTT--------G---T-
i Felis_catus_fca126.CM031420.1                         I 4 I 9
s Felis_nigripes.FelNig_flattened_line_8080                 27113 31 +     52776 A-TTT-T---T-GG-TC----AGGT-ATT--CCT-A------G-----------CA-GCTTT--------G---T-
i Felis_nigripes.FelNig_flattened_line_8080             I 4 I 9
s Fukomys_damarensis.KN123630.1                          13896241 32 -  19261668 A-TTT-T---T-GG-TT----AGAT-ATT--CAT-A------G-----------CA-ATTGT--------A---TG
i Fukomys_damarensis.KN123630.1                         C 0 I 8
s Galago_moholi.ctg555                                     215423 32 -    847004 A-CTT-T---C-GG-TC----TAAT-ATT--TAT-A------G-----------CA-ATTCT--------C---TG
i Galago_moholi.ctg555                                  C 0 I 8
s Galago_senegalensis.k141_964197                           17784 32 -     43889 A-CTT-T---C-GG-TC----TAAT-ATT--TAT-A------G-----------CA-ATTCT--------C---TG
i Galago_senegalensis.k141_964197                       C 0 I 8
s Galagoides_demidoff.k141_1769638                          14928 32 +     27357 A-CTT-T---C-GG-TC----TAAT-ATT--TAT-A------A-----------CA-ATTCT--------C---TA
i Galagoides_demidoff.k141_1769638                      C 0 I 8
s Galeopterus_variegatus.GalVar_scaffold_354               159673 32 +    324696 A-TTT-G---G-GG-TT----AGAT-AAT--CAT-A------G-----------TA-ATCCT--------A---TG
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 I 8
s Giraffa_tippelskirchi.LVKQ01S012154.1                    186104 33 -    189561 AGATT-T---T-CG-TC----AGGT-ATT--CAT-A------C-----------CA-ACCTT--------A---TG
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 2 I 8
s Glis_glis.GliGli_scaffold_79770                           16570 30 -     18683 A-TTT-T---T-GG-TC----AGAT-ATT--CAT-G------G-----------CA-AC--T--------A---TG
i Glis_glis.GliGli_scaffold_79770                       C 0 I 8
s Gorilla_beringei.k141_111300                               9352 32 -     14630 A-TAT-T---C-GG-TC----AGAT-ATG--CAT-A------G-----------CA-AACCT--------A---TG
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119656452 32 - 195582420 A-TAT-T---C-GG-TC----AGAT-ATG--CAT-A------G-----------CA-AACCT--------A---TG
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   79883 31 +    118900 A-TTT-T---T-GG-TC----AGCT-ATT--CAT-G------G-----------AA--CTCT--------A---TG
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 I 8
s Hapalemur_alaotrensis.k141_1280836                         6156 32 +     10286 A-CTT-T---T-GG-TC----AGAT-ATT--CAT-A------G-----------CA-ACTCT--------A---TA
i Hapalemur_alaotrensis.k141_1280836                    C 0 I 8
s Hapalemur_gilberti.k141_279011                             4634 32 -     11661 A-CTT-T---T-GG-TG----AGAT-ATT--CAT-A------G-----------CA-ACTCT--------A---AA
i Hapalemur_gilberti.k141_279011                        C 0 I 8
s Hapalemur_griseus.k141_1387522                             9961 32 +     56096 A-CTT-T---T-GG-TG----AGAT-ATT--CAT-A------G-----------CA-ACTCT--------A---AA
i Hapalemur_griseus.k141_1387522                        C 0 I 8
s Hapalemur_meridionalis.k141_186231                        33210 32 -     42470 A-CTT-T---T-GG-TG----AGAT-ATT--CAT-A------G-----------CA-ACTCT--------A---AA
i Hapalemur_meridionalis.k141_186231                    C 0 I 8
s Hapalemur_occidentalis.k141_797938                        49833 32 -     54384 A-CTT-T---T-GG-TC----AGAT-ATT--CAT-A------G-----------CA-ACTCT--------A---TA
i Hapalemur_occidentalis.k141_797938                    C 0 I 8
s Helogale_parvula.HelPar_flattened_line_22962              22743 31 +     53719 A-TTT-T---T-GG-TC----AGGG-AAT--CCT-A------G-----------TG-GCTTT--------A---T-
i Helogale_parvula.HelPar_flattened_line_22962          I 4 I 9
s Hemitragus_hylocrius.HemHyl_scaffold_16669                32975 33 -     91191 AGATT-T---T-CA-TC----AGGT-ATT--CAT-A------C-----------CA-ACCTT--------A---TG
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 2 I 8
s Heterocephalus_glaber.JH602058.1                        2560732 32 +  31725842 A-TTT-T---T-GG-TT----AGAC-ATT--CAT-A------A-----------CA-ACTCT--------A---TG
i Heterocephalus_glaber.JH602058.1                      C 0 I 8
s Heterohyrax_brucei.HetBruBak_scaffold_25354               62968 25 +     73687 G-CTT-T---G-GG-TT----AGAC-ATT--GAT-G------G-----------CA-T------------------
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 I 5
s Hippopotamus_amphibius.HipAmp_scaffold_1308              150737 34 +    277961 AGATT-A---TTGG-TC----AGGT-ATT--CAC-A------G-----------CA-ACCTT--------A---TA
i Hippopotamus_amphibius.HipAmp_scaffold_1308           I 2 I 8
s Hipposideros_armiger.JXIK01001052.1                      277226 34 -    479840 AGATGTT---T-GG-TC----AGGC-ATT--CAT-A------G-----------CA-ACCTT--------G---TG
i Hipposideros_armiger.JXIK01001052.1                   I 120 I 8
s Hipposideros_galeritus.HipGal_scaffold_7653                5698 34 +     86108 AGATTTT---T-GG-TC----AGGC-ATG--CAT-A------G-----------CA-ACCTT--------G---TG
i Hipposideros_galeritus.HipGal_scaffold_7653           I 73 I 8
s Hoolock_leuconedys.ctg315                                   350358 32 +    431944 A-TTT-T---T-GG-TC----AGAT-ATG--CAT-A------G-----------CA-AATCT--------A---TG
i Hoolock_leuconedys.ctg315                                C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 23215 31 -     67322 A-TTT-C---T-GG-TC----AGGT-AAT--CCT-A------G-----------TG-GCTTT--------A---T-
i Hyaena_hyaena.HyaHya_flattened_line_20729             I 4 I 9
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           21346 32 -    119109 A-TCT-T---T-GG-TT----AGAT-ATT--CAT-A------G-----------CA-ACTCT--------A---TG
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 I 8
s Hystrix_cristata.HysCri_scaffold_50788                     9639 32 +     22540 A-TTT-T---T-GG-TT----AGAT-ATT--CAT-A------G-----------TG-ACTCT--------A---TG
i Hystrix_cristata.HysCri_scaffold_50788                C 0 I 8
s Ictidomys_tridecemlineatus.JH393315.1                   7130478 30 +  13083262 A-TTT-T---T-GG-TC----AGAT-ATT--CAT-A------T-----------CA-AC--T--------A---TG
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 I 8
s Indri_indri.k141_2197838                                   1680 32 +      3484 A-CCT-A---T-GG-TC----AGAT-ATT--CAT-A------G-----------CA-ACTCT--------A---TA
i Indri_indri.k141_2197838                              C 0 I 8
s Inia_geoffrensis.IniGeo_flattened_line_66725              12947 34 +     17520 AGATT-T---CTGG-CC----AGGT-ATT--CAC-A------G-----------CA-ACCTT--------A---CA
i Inia_geoffrensis.IniGeo_flattened_line_66725          I 2 I 8
s Kogia_breviceps.KogBre_flattened_line_35920               27566 34 +     37189 AGATT-T---CTGG-CC----AGGT-ATT--CAC-A------G-----------CA-ACCTT--------A---CA
i Kogia_breviceps.KogBre_flattened_line_35920           I 2 I 8
s Lagothrix_lagothricha.k141_12968                          54122 31 -    147782 A-TTT-T---T-G--TC----AGAT-ATG--CAT-A------G-----------CA-AATCT--------A---TG
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    5666 33 +     26176 AGATT-T---T-GG-TC----AGGT-GTT--CAT-A------G-----------CA-ATCTT--------A---TG
i Lasiurus_borealis.LasBor_scaffold_59542               I 2 I 8
s Lemur_catta.scaffold_1                                258411508 32 - 285822530 A-CTT-T---T-GG-TC----AGAT-ATT--CAT-A------G-----------CA-ACTCT--------A---TA
i Lemur_catta.scaffold_1                                C 0 I 8
s Lepilemur_ankaranensis.k141_884009                        28822 32 +     39228 A-CTT-T---T-GG-TC----AGAT-ATT--CAT-A------G-----------CA-ATTCT--------G---TA
i Lepilemur_ankaranensis.k141_884009                    C 0 I 8
s Lepilemur_dorsalis.k141_134267                            58186 32 +     63517 A-CTT-T---T-GG-TC----AGAT-ATT--CAT-A------G-----------CA-ATTCT--------G---TA
i Lepilemur_dorsalis.k141_134267                        C 0 I 8
s Lepilemur_ruficaudatus.k141_574529                        36566 32 -     38897 A-CTT-T---T-GG-TC----AGAT-ATT--CAT-A------G-----------CA-ATTCT--------G---TA
i Lepilemur_ruficaudatus.k141_574529                    C 0 I 8
s Lepilemur_septentrionalis.k141_710646                      2612 32 -     13103 A-CTT-T---T-GG-TC----AGAT-ATT--CAT-A------G-----------CA-ATTCT--------G---TA
i Lepilemur_septentrionalis.k141_710646                 C 0 I 8
s Leptonychotes_weddellii.KB714749.1                      3091552 23 -   3498232 -------------G-TT----AGgt--tt--cat-a------g-----------ca-gcttt--------a---t-
i Leptonychotes_weddellii.KB714749.1                    I 7 I 6
s Lepus_americanus.LepAme_scaffold_62849                    20974 30 +     22452 A-TTT-T---T-GA-TC----AGAT-ATT--CAT-A------A-----------TA-AT--C--------C---TG
i Lepus_americanus.LepAme_scaffold_62849                C 0 I 8
s Lipotes_vexillifer.KE558548.1                            139881 34 +   3060487 AGATT-T---CTGG-CC----AGGT-ATT--CAC-A------G-----------CA-ACCTT--------A---CA
i Lipotes_vexillifer.KE558548.1                         I 2 I 8
s Lophocebus_aterrimus.ctg55                             19252558 32 +  19376315 A-TTT-T---T-GG-TC----AGAT-ATG--CAT-A------G-----------CA-AACCT--------A---TG
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           15373 32 +     84689 A-CTT-T---G-GG-TC----TAAT-ATT--TAT-A------G-----------CA-ATTCT--------C---TA
i Loris_lydekkerianus.k141_550999                       C 0 I 8
s Loris_tardigradus.ctg97                                 3783112 32 +   6799190 A-CTT-T---G-GG-TC----TAAT-ATT--TAT-A------G-----------CA-ATTCT--------C---TA
i Loris_tardigradus.ctg97                               C 0 I 8
s Loxodonta_africana.GL010040.1                          20598899 25 -  62548349 A-TTT-T---T-AG-TC----AGAT-ATT--CAT-A------G-----------CA-A------------------
i Loxodonta_africana.GL010040.1                         C 0 I 5
s Lycaon_pictus.CM007556.1                               11095302 31 +  39895028 A-TTT-T---T-AG-TC----AGGC-GTT--CAT-A------G-----------TA-GCTTT--------G---T-
i Lycaon_pictus.CM007556.1                              I 4 I 6
s Macaca_arctoides.k141_2201161                             24309 32 +     74745 A-TTT-T---T-GG-TC----AGAT-ATG--CAT-A------G-----------CA-AACCT--------A---TG
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12710770 32 +  12821369 A-TTT-T---T-GG-TC----AGAT-ATG--CAT-A------G-----------CA-AACCT--------A---TG
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                3343 32 -     26467 A-TTT-T---T-GG-TC----AGAT-ATG--CAT-A------G-----------CA-AACCT--------A---TG
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           51214 32 +     63263 A-TTT-T---T-GG-TC----AGAT-ATG--CAT-A------G-----------CA-AACCT--------A---TG
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 3324 32 -     26361 A-TTT-T---T-GG-TC----AGAT-ATG--CAT-A------G-----------CA-AACCT--------A---TG
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 6514 32 -      7381 A-TTT-T---T-GG-TC----AGAT-ATG--CAT-A------G-----------CA-AACCT--------A---TG
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  49743 32 -     79256 A-TTT-T---T-GG-TC----AGAT-ATG--CAT-A------G-----------CA-AACCT--------A---TG
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196039841 32 + 196197964 A-TTT-T---T-GG-TC----AGAT-ATG--CAT-A------G-----------CA-AACCT--------A---TG
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11450011 32 +  11645122 A-TTT-T---T-GG-TC----AGAT-ATG--CAT-A------G-----------CA-AACCT--------A---TG
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   8697 32 -     46448 A-TTT-T---T-GG-TC----AGAT-ATG--CAT-A------G-----------CA-AACCT--------A---TG
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                6360 32 -     13212 A-TTT-T---T-GG-TC----AGAT-ATG--CAT-A------G-----------CA-AACCT--------A---TG
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 20040 32 -     55006 A-TTT-T---T-GG-TC----AGAT-ATG--CAT-A------G-----------CA-AACCT--------A---TG
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43845155 32 +  43892939 A-TTT-T---T-GG-TC----AGAT-ATG--CAT-A------G-----------CA-AACCT--------A---TG
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               21324 32 -     24607 A-TTT-T---T-GG-TC----AGAT-ATG--CAT-A------G-----------CA-AACCT--------A---TG
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               8694 32 -     27140 A-TTT-T---T-GG-TC----AGAT-ATG--CAT-A------G-----------CA-AACCT--------A---TG
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43441730 32 -  43563597 A-TTT-T---T-GG-TC----AGAT-ATG--CAT-A------G-----------CA-AACCT--------A---TG
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4454534 32 -   4543643 A-TTT-T---T-GG-TC----AGAT-ATG--CAT-A------G-----------CA-AACCT--------A---TG
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            152273 32 +    252755 A-TTT-T---T-GG-TC----AGAT-ATT--CAT-A------G-----------CA-ACTAT--------A---TG
i Manis_javanica.JSZB01003966.1                         I 4 I 8
s Manis_pentadactyla.KN017078.1                             39863 32 +     58827 A-TTT-T---T-GG-TC----AGGT-ATT--CAT-A------G-----------CA-ACCAT--------A---TG
i Manis_pentadactyla.KN017078.1                         I 4 I 8
s Marmota_marmota.CZRN01000005.1                         36878350 30 +  64221397 A-TTT-T---T-GG-TC----AGAT-ATT--CAT-A------T-----------CA-AC--T--------A---TG
i Marmota_marmota.CZRN01000005.1                        C 0 I 8
s Megaderma_lyra.MegLyr_scaffold_3562                       65702 20 -    234502 AGATTTT---C-AG-TC----AGAC-CTT--C--------------------------------------------
i Megaderma_lyra.MegLyr_scaffold_3562                   I 2 I 9
s Mellivora_capensis.MelCap_flattened_line_15433             6468 23 -     87323 -------------G-TT----AGGT--TT--CAT-A------G-----------CA-GCTTT--------A---T-
i Mellivora_capensis.MelCap_flattened_line_15433        I 7 I 6
s Meriones_unguiculatus.MerUng_scaffold_9483                 1374 32 +    115071 G-TTT-T---T-GG-TC----AGAT-TTT--CAT-A------G-----------CA-ATTCT--------A---TT
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 I 19
s Mesocricetus_auratus.KB708139.1                         1051646 31 -  26018355 --TTT-T---T-GG-TC----AAAT-TTC--CAG-A------G-----------CC-ATTCT--------G---TT
i Mesocricetus_auratus.KB708139.1                       C 0 I 8
s Mesoplodon_bidens.MesBid_scaffold_96348                    2538 34 -     12939 AGATT-T---CTGT-CC----AGGT-ATT--CAC-A------G-----------CA-ACCTT--------A---TA
i Mesoplodon_bidens.MesBid_scaffold_96348               I 2 I 8
s Microcebus_murinus.CM007691.1                          16514556 16 +  47401472 ----------------------------T--CAT-A------G-----------CA-ACTCT--------A---TA
i Microcebus_murinus.CM007691.1                         C 0 I 8
s Microgale_talazaci.MicTal_scaffold_34660                  41564 25 -     48017 A-GTT-T---T-AG-TC----CTAT-ATT--CAA-A------G-----------CA-A------------------
i Microgale_talazaci.MicTal_scaffold_34660              C 0 I 5
s Micronycteris_hirsuta.MicHir_scaffold_37978               25043 32 -     32043 AGATT-T---T-GG-TC----AGTT-ACT---AC-A------G-----------CA-ATCTC--------A---TG
i Micronycteris_hirsuta.MicHir_scaffold_37978           I 2 I 8
s Microtus_ochrogaster.CM001673.1                        22824723 31 -  98408828 G-TT--T---T-GG-TC----AGAT-TTT--CAT-A------G-----------CA-ATTCT--------A---TT
i Microtus_ochrogaster.CM001673.1                       C 0 I 8
s Miniopterus_natalensis.LDJU01000022.1                   8213103 33 +  10048721 AGATT-T---C-GG-TC----ACGT-ATC--CAC-A------G-----------CA-ATCTT--------A---TG
i Miniopterus_natalensis.LDJU01000022.1                 I 2 I 8
s Miniopterus_schreibersii.MinSch_scaffold_24116            37592 33 +     45743 AGATT-T---C-GG-TC----ACGT-ATC--CAC-A------G-----------CA-ATCTT--------A---TG
i Miniopterus_schreibersii.MinSch_scaffold_24116        I 2 I 8
s Miopithecus_ogouensis.k141_2935907                         6276 32 +     29742 A-TTT-T---T-GG-TC----AGAT-ATG--CAT-A------G-----------CA-AACCT--------A---TG
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        17048 23 -    104932 -------------G-TT----AGGT--TT--CAT-A------G-----------CA-GCTTT--------A---T-
i Mirounga_angustirostris.MirAng_flattened_line_8852    I 7 I 6
s Mirza_zaza.k141_593947                                     5239 16 -     12809 ----------------------------T--CAT-A------G-----------CA-ACTCT--------A---TA
i Mirza_zaza.k141_593947                                C 0 I 8
s Monodon_monoceros.MonMon_M_scaffold_5598                 150328 34 +    154973 AGATT-T---CTGG-CC----AGGT-ATT--CAC-A------G-----------CA-ACCTT--------A---CA
i Monodon_monoceros.MonMon_M_scaffold_5598              I 2 I 8
s Mormoops_blainvillei.MorMeg_scaffold_2952                163581 33 +    265003 AGATT-T---T-GG-TC----AGTT-ATT--CAC-A------G-----------CA-ACCTT--------T---TG
i Mormoops_blainvillei.MorMeg_scaffold_2952             I 2 I 8
s Moschus_moschiferus.MosMos_scaffold_78805                  6324 33 -     19904 AGATT-T---T-CA-TC----AGGT-ATT--CAT-A------C-----------CA-ACCTT--------A---TG
i Moschus_moschiferus.MosMos_scaffold_78805             I 2 I 8
s Mungos_mungo.MunMun_flattened_line_8729                  150418 31 -    168139 A-CTT-T---T-GG-TC----AGGG-AAT--CCT-A------G-----------TG-TCTTT--------A---T-
i Mungos_mungo.MunMun_flattened_line_8729               I 4 I 9
s Murina_feae.MurFea_scaffold_2254                          24516 33 -    100666 AGATT-T---T-GG-TC----AAGT-GTT--CAT-A------G-----------CA-ATCTT--------A---TG
i Murina_feae.MurFea_scaffold_2254                      I 2 I 8
s Mus_caroli.LT608236.1                                  70771944 32 +  92629107 G-GTT-T---T-GG-TC----ATAT-TTT--CAT-A------G-----------CA-ATTTT--------G---TT
i Mus_caroli.LT608236.1                                 C 0 I 8
s Mus_musculus.chr16                                     75493998 32 +  98207768 G-GTT-T---T-GC-TC----ATAT-TTT--CAT-A------G-----------TA-ATTTT--------G---TT
i Mus_musculus.chr16                                    C 0 I 8
s Mus_pahari.LT608305.1                                  67560750 32 +  89017189 G-GTT-T---T-GG-TC----AAAT-TTT--CAT-A------G-----------TA-ATTTT--------G---TT
i Mus_pahari.LT608305.1                                 C 0 I 8
s Mus_spretus.CM004110.1                                 74336724 32 +  97876770 G-GTT-T---T-GC-TC----ATAT-TTT--CAT-A------G-----------TA-ATTTT--------G---TT
i Mus_spretus.CM004110.1                                C 0 I 8
s Muscardinus_avellanarius.MusAve_scaffold_9643             14973 32 +     98495 A-TTT-T---T-GG-TG----AGAT-ATT--CAT-G------G-----------CA-GCTCT--------A---TG
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 I 8
s Mustela_putorius.JH417978.1                             4428307 23 -  28371801 -------------G-TT----AGgt--tt--cat-a------g-----------ca-gcttt--------a---t-
i Mustela_putorius.JH417978.1                           I 7 I 5
s Myocastor_coypus.MyoCoy_scaffold_3653                     93938 32 -    117718 A-CTT-T---T-GG-AT----AAAC-AGG--CAT-A------G-----------CA-AGTCC--------G---TG
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 I 8
s Myotis_brandtii.KE161952.1                               971388 33 +   8389877 AGATT-T---T-GG-TC----AGGT-GTT--CAT-A------G-----------CA-ATCTT--------A---TG
i Myotis_brandtii.KE161952.1                            I 2 I 8
s Myotis_davidii.KB114863.1                               5022808 33 +   6462685 AGATT-T---T-GG-TC----AGGT-GTT--CAT-A------G-----------CA-ATCTT--------A---CG
i Myotis_davidii.KB114863.1                             I 2 I 8
s Myotis_lucifugus.GL429887.1                             3468892 33 -   3747815 AGATT-T---T-GG-TC----AGGT-GTT--CAT-A------G-----------CA-ATCTT--------A---TG
i Myotis_lucifugus.GL429887.1                           I 2 I 8
s Myotis_myotis.MyoMyo_scaffold_6123                        14133 33 +     66751 AGATT-T---T-GG-TC----AGGT-GTG--CAT-A------G-----------CA-ATCTT--------A---TG
i Myotis_myotis.MyoMyo_scaffold_6123                    I 2 I 8
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             7743 25 -      8794 A-TTT-T---T-GG-TC----AGCT-ATT--CAT-A------G-----------CA-A------------------
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 I 7
s Nannospalax_galili.KL201303.1                            120479 24 +    362372 ---------------TC----AGAT-ATC--AAT-A------G-----------CA-ACTTT--------T---TG
i Nannospalax_galili.KL201303.1                         I 2 I 8
s Neomonachus_schauinslandi.NINY01007774.1                4490446 23 -  14209539 -------------G-TT----AGgt--tt--cat-a------g-----------ca-gcttt--------a---t-
i Neomonachus_schauinslandi.NINY01007774.1              I 7 I 6
s Neophocaena_asiaeorientalis.KZ688543.1                  3954919 34 -   4490290 AGATT-T---CTGG-CC----AGGT-ATT--CAC-A------G-----------CA-ACCTT--------A---CA
i Neophocaena_asiaeorientalis.KZ688543.1                I 2 I 8
s Noctilio_leporinus.NocLep_scaffold_12062                  50641 33 +     94413 AGATT-T---T-GG-TC----AGTT-ATC--CAC-A------T-----------CA-ACCTT--------T---TG
i Noctilio_leporinus.NocLep_scaffold_12062              I 2 I 8
s Nomascus_annamensis.k141_762468                             344 32 -      2755 A-TTT-T---T-GG-TC----AGAT-ATG--CAT-A------G-----------CA-AATCT--------A---TG
i Nomascus_annamensis.k141_762468                       C 0 C 0
s Nomascus_concolor.k141_70405                                964 32 +      1153 A-TTT-T---T-GG-TC----AGAT-ATG--CAT-A------G-----------CA-AATCT--------A---TG
i Nomascus_concolor.k141_70405                          C 0 C 0
s Nomascus_gabriellae.k141_1400361                            895 32 -      2203 A-TTT-T---T-GG-TC----AGAT-ATG--CAT-A------G-----------CA-AATCT--------A---TG
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_453                             6207 32 +     12787 A-TTT-T---T-GG-TC----AGAT-ATG--CAT-A------G-----------CA-AATCT--------A---TG
i Nomascus_siki_b.tarseq_453                        n 6846 C 0
s Nomascus_siki_a.k141_421408                                   809 32 +     16235 A-TTT-T---T-GG-TC----AGAT-ATG--CAT-A------G-----------CA-AATCT--------A---TG
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                38167 31 +   3668941 A-TTT-T---T-AG-TC----AGGC-GTT--CAT-A------G-----------TA-GCTTT--------G---T-
i Nyctereutes_procyonoides.CAJHUB010000786.1            I 4 I 6
s Nycticebus_bengalensis.LG16                            65572049 32 -  95554990 A-CTT-T---T-GG-TC----TAAT-ATT--TAT-A------G-----------CA-ATTCT--------C---TA
i Nycticebus_bengalensis.LG16                           C 0 I 8
s Nycticebus_coucang.k141_771591                            15459 32 +     16181 A-CTT-T---T-GG-TC----TAAT-ATT--TAT-A------G-----------CA-ATTCT--------C---TA
i Nycticebus_coucang.k141_771591                        C 0 I 8
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65680237 32 +  89412551 A-CTT-T---T-GG-TC----TAAT-ATT--TAT-A------G-----------CA-ATTCT--------C---TA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 I 8
s Ochotona_princeps.JH802095.1                            5000023 32 -  23139505 A-GTC-A---T-GG-TC----AGAT-ATT--CAT-T------G-----------CA-ACCCT--------A---TG
i Ochotona_princeps.JH802095.1                          I 675 I 6
s Octodon_degus.JH651621.1                                3689425 32 +  10294119 A-CTT-T---T-GG-AT----AAAT-AGT--CAC-A------G-----------CA-AGTCC--------A---TG
i Octodon_degus.JH651621.1                              C 0 I 8
s Odobenus_rosmarus.KB229369.1                             685149 23 -   3126709 -------------T-TT----AGgt--tt--cat-a------g-----------ca-gcttt--------a---t-
i Odobenus_rosmarus.KB229369.1                          I 7 I 6
s Odocoileus_virginianus.KZ101650.1                       1083755 32 +   1425656 AGATT-T---T-CA-TC----AGGT-ATT--CAC-A------C-----------CA-ACC-T--------A---TG
i Odocoileus_virginianus.KZ101650.1                     I 2 I 8
s Okapia_johnstoni.LVCL01S0017931.1                         41838 33 +     78940 AGATT-T---T-CA-TC----AGGT-ATT--CAT-A------C-----------CA-ACCTT--------A---TG
i Okapia_johnstoni.LVCL01S0017931.1                     I 2 I 8
s Ondatra_zibethicus.OndZib_scaffold_6821                  130519 31 +    145789 G-TT--T---T-GG-TC----AGAT-TTC--CAT-A------G-----------CA-ATTCT--------A---TT
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 I 8
s Onychomys_torridus.OnyTor_scaffold_12578                  43214 32 +     62360 C-TTT-T---T-GG-TC----AGAT-TTT--CAT-A------G-----------CG-ATTCT--------G---TT
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 I 8
s Orcinus_orca.KB316965.1                                 7228593 34 -   7562323 AGATT-T---CTGG-CC----AGGT-ATT--CAG-A------G-----------CA-ATCTT--------A---CA
i Orcinus_orca.KB316965.1                               I 2 I 8
s Orycteropus_afer.OryAfe_flattened_line_13509              64339 25 -     66828 A-TTT-T---T-GG-TC----AGAT-ATT--GAT-A------G-----------AA-A------------------
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 I 5
s Oryctolagus_cuniculus.CM000803.1                      141883989 32 + 163896628 a-ttt-t---t-ga-tC----AGAT-ATT--CAT-A------A-----------TA-AT--C-C--T---A---TG
i Oryctolagus_cuniculus.CM000803.1                      C 0 I 8
s Otocyon_megalotis.JAEUCK010005121.1                      315305 31 -    505867 A-TTT-T---T-AG-TC----AGGC-GTT--CAT-A------G-----------TA-GCTTT--------G---T-
i Otocyon_megalotis.JAEUCK010005121.1                   I 4 I 6
s Otolemur_crassicaudatus.k141_505435                        5285 32 -     53940 A-CTT-T---C-GG-TC----TAAT-ATT--TAT-A------G-----------CA-ATTCT--------C---TA
i Otolemur_crassicaudatus.k141_505435                   C 0 I 8
s Otolemur_garnettii.GL873528.1                          18013258 28 -  38779656 A-CTT-T---C-GG-TC----T-----TT--TAT-A------G-----------CA-ATTCT--------C---TA
i Otolemur_garnettii.GL873528.1                         C 0 I 8
s Ovis_aries.CM001582.2                                 134082761 33 - 275406953 AGGTT-T---T-CA-TC----AGGT-ATT--CAT-A------C-----------CA-ACCTT--------A---TG
i Ovis_aries.CM001582.2                                 I 2 I 8
s Ovis_canadensis.OviCan_scaffold_6251                      83995 33 +    140051 AGATT-T---T-CA-TC----AGGT-ATT--CAT-A------C-----------CA-ACCTT--------A---TG
i Ovis_canadensis.OviCan_scaffold_6251                  I 2 I 8
s Pan_paniscus.CM003386.1                               127578631 32 - 205426864 A-TAT-T---T-GG-TC----AGAT-ATG--CAT-A------G-----------CA-AATCT--------A---TG
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.KZ622857.1                               333421 32 +    772158 A-TTT-T---T-GG-TC----AGAT-ATG--CAT-A------G-----------CA-AATCT--------A---TG
i Pan_troglodytes.KZ622857.1                            I 88 I 436
s Panthera_onca.PanOnc_flattened_line_1615                  40033 31 +    295523 A-TTT-T---T-GG-TC----AGGT-ATT--CCT-A------G-----------CA-GCTTT--------G---T-
i Panthera_onca.PanOnc_flattened_line_1615              I 4 I 9
s Panthera_pardus.KV860323.1                              3643848 31 +  18214204 A-TTT-T---T-GG-TC----AGGT-ATT--CCT-A------G-----------CA-GCTTT--------G---T-
i Panthera_pardus.KV860323.1                            I 4 I 9
s Panthera_tigris.KE721879.1                              5033496 31 -   6340057 A-TTT-T---T-GG-TC----AGGT-ATT--CCT-A------G-----------CA-GCTTT--------G---T-
i Panthera_tigris.KE721879.1                            I 4 I 9
s Pantholops_hodgsonii.KE114631.1                         1071637 33 -   1292953 AGATT-T---T-CA-TC----AGGT-ATT--CAT-A------C-----------TA-ACCTT--------A---TG
i Pantholops_hodgsonii.KE114631.1                       I 2 I 15
s Papio_anubis.CM001492.2                               188160519 32 - 188283584 A-TTT-T---T-GG-TC----AGAT-ATG--CAT-A------G-----------CA-AACCT--------A---TG
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              3609 32 +     25005 A-TTT-T---T-GG-TC----AGAT-ATG--CAT-A------G-----------CA-AACCT--------A---TG
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47517891 32 +  47705337 A-TTT-T---T-GG-TC----AGAT-ATG--CAT-A------G-----------CA-AACCT--------A---TG
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 71882 32 -    104429 A-TTT-T---T-GG-TC----AGAT-ATG--CAT-A------G-----------CA-AACCT--------A---TG
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   10414 32 +     14967 A-TTT-T---T-GG-TC----AGAT-ATG--CAT-A------G-----------CA-AACCT--------A---TG
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 6279 32 -      7628 A-TTT-T---T-GG-TC----AGAT-ATG--CAT-A------G-----------CA-AACCT--------A---TG
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    121520 31 -    135482 A-TTT-T---T-GG-TC----AGGT-AAT--CCT-A------G-----------TG-GCTTT--------A---T-
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 I 4 I 9
s Perodicticus_ibeanus.k141_117958                          10949 32 -     23713 A-CTT-T---T-GG-TC----TAAT-ATT--TAC-A------G-----------CA-ATTCA--------C---TA
i Perodicticus_ibeanus.k141_117958                      C 0 I 8
s Perodicticus_potto.k141_1136815                           12089 41 +     61070 A-CTT-T---C-GG-TC----TAAT-ATT--TAC-ATGTTCTA-----------AT-ATTTA--------CATGTA
i Perodicticus_potto.k141_1136815                       C 0 I 10
s Perognathus_longimembris.PerPac_flattened_line_19359       2361 36 +     49596 A-TTTTTATTT-GA-TC----AGAC-AGT--CAT-A------G-----------CA-ACTTT--------A---TG
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 I 8
s Peromyscus_maniculatus.KI615518.1                       4955579 32 -   8017169 G-TTT-T---T-GG-TC----AGAT-TTT--CAT-A------G-----------GG-ATTCT--------G---TT
i Peromyscus_maniculatus.KI615518.1                     C 0 I 8
s Petromus_typicus.PetTyp_scaffold_33007                    17419 32 -     36578 A-TTT-T---T-GG-TT----AGAT-ATT--CAT-A------G-----------CA-ACTCT--------A---GG
i Petromus_typicus.PetTyp_scaffold_33007                C 0 I 8
s Phocoena_phocoena.PhoPho_flattened_line_53071              3060 34 +      8220 AGATT-T---CTGG-CC----AGGT-ATT--CAC-A------G-----------CA-ACCTT--------A---CA
i Phocoena_phocoena.PhoPho_flattened_line_53071         I 2 I 8
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            99679 33 +    112873 AGATT-T---T-GG-TC----AGGT-GTT--CAT-A------G-----------CA-ATCTT--------A---TG
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        I 2 I 8
s Platanista_gangetica.PlaMin_flattened_line_72990           9531 34 +     21690 AGATT-T---CTGG-CC----AGGA-ATT--CAC-A------G-----------CA-AACTT--------A---CA
i Platanista_gangetica.PlaMin_flattened_line_72990      I 2 I 8
s Plecturocebus_bernhardi.k141_959214                       26214 32 +     44506 A-TAT-T---T-GG-TC----AGAT-AT--GCAT-A------G-----------CA-AATCT--------A---TG
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        26427 32 +     67491 A-TAT-T---T-GC-TC----AGAT-AT--GCAT-A------G-----------CA-AATCT--------A---TG
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      16666 32 -     98129 A-TAT-T---T-GG-TC----AGAT-AT--GCAT-A------G-----------CA-AATCT--------A---TG
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     26267 32 +    147771 A-TAT-T---T-GG-TC----AGAT-AT--GCAT-A------G-----------CA-AATCT--------A---TG
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         2902 32 -     43940 A-TAT-T---T-GG-TC----AGAT-AT--GCAT-A------G-----------CA-AATCT--------A---TG
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          6985 32 -     55515 A-TAT-T---T-GG-TC----AGAT-AC--ACAT-A------G-----------CA-AATCT--------A---TG
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         26339 32 +    152463 A-TAT-T---T-GG-TC----AGAT-AT--GCAT-A------G-----------CA-AATCT--------A---TG
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       4147 32 -    119457 A-TAT-T---T-GG-TC----AGAT-AT--GCAT-A------G-----------CA-AATCT--------A---TG
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         16062 32 +    134592 A-TAT-T---T-GG-TC----AGAT-AT--GCAT-A------G-----------CA-AATCT--------A---TG
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          26649 32 -     75465 A-TAT-T---T-GG-TC----AGAT-AT--GCAT-A------G-----------CA-AATCT--------A---TG
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              191262 32 -    373494 A-TTT-T---T-GG-TC----AGAT-ATG--CAT-A------G-----------CA-AATCT--------A---TG
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19811909 32 +  19899266 A-TTT-T---T-GG-TC----AGAT-ATG--CAT-A------G-----------CA-AATCT--------A---TG
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                4073 25 -      9567 G-CTT-T---G-GG-TT----AGAC-ATT--GAT-G------G-----------CA-T------------------
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 I 5
s Prolemur_simus.MPIZ01000048.1                           6852882 32 +  12164890 A-CTT-T---T-GG-TC----AGAT-ATT--CAT-A------G-----------CA-ACTCT--------A---TA
i Prolemur_simus.MPIZ01000048.1                         C 0 I 8
s Propithecus_coquerelli.NW_012147863.1                     21691 32 -     30946 N-NNN-N---N-NN-NN----NNNN-NNN--NNN-N------N-----------NN-NNNNN--------N---NN
i Propithecus_coquerelli.NW_012147863.1                 C 0 I 8
s Propithecus_coronatus.k141_1353159                         7968 32 +     11805 A-CTT-T---T-GG-TC----AGAT-ATT--CAT-A------G-----------CA-ACTCT--------A---TA
i Propithecus_coronatus.k141_1353159                    C 0 I 8
s Propithecus_diadema.k141_577245                           47302 32 +     52369 A-CTT-T---T-GG-TC----AGAT-ATT--CAT-A------G-----------CA-ACTCT--------A---TA
i Propithecus_diadema.k141_577245                       C 0 I 8
s Propithecus_edwardsi.k141_1317105                         39689 32 -     44753 A-CTT-T---T-GG-TC----AGAT-ATT--CAT-A------G-----------CA-ACTCT--------A---TA
i Propithecus_edwardsi.k141_1317105                     C 0 I 8
s Propithecus_perrieri.k141_7554                            21612 32 +     27322 A-CTT-T---T-GG-TC----AGAT-ATT--CAT-A------G-----------CA-ACTCT--------A---TA
i Propithecus_perrieri.k141_7554                        C 0 I 8
s Propithecus_tattersalli.k141_907138                       21261 32 -     53241 A-CTT-T---T-GG-TC----AGAT-ATT--CAT-A------G-----------CA-ACTCT--------A---TA
i Propithecus_tattersalli.k141_907138                   C 0 I 8
s Propithecus_verreauxi.k141_158021                         43524 32 -     48185 A-CTT-T---T-GG-TC----AGAT-ATT--CAT-A------G-----------CA-ACTCT--------A---TA
i Propithecus_verreauxi.k141_158021                     C 0 I 8
s Psammomys_obesus.NESX01026517.1                           38369 32 +     77221 G-TTT-T---T-GG-TC----AGAT-TTT--CAT-A------A-----------CA-ATTCT--------A---TT
i Psammomys_obesus.NESX01026517.1                       C 0 I 19
s Pteronotus_parnellii.KE867983.1                            6225 32 -     27784 AGATT-T---T-GG-TC----AATC-ATT--CAG-A------G-----------CA-ACGTT--------A---T-
i Pteronotus_parnellii.KE867983.1                       I 2 I 8
s Pteronura_brasiliensis.PteBra_flattened_line_1343        250436 23 -    344369 -------------G-TT----AGGT--TT--CAT-A------G-----------CA-GCTTT--------A---T-
i Pteronura_brasiliensis.PteBra_flattened_line_1343     I 7 I 6
s Puma_concolor.QAVW01000427.1                          131540145 31 - 161321710 A-TTT-T---T-GG-TC----AGGT-ATT--CCT-A------G-----------CA-GCCTT--------G---T-
i Puma_concolor.QAVW01000427.1                          I 4 I 9
s Rangifer_tarandus.RanTarSib_scaffold_24239                20619 33 +     68503 AGATT-T---T-CA-TC----AGGT-ATT--CAC-A------C-----------CA-ACCTT--------A---TG
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 2 I 8
s Rattus_norvegicus.chr11                                13917780 32 +  90463843 G-GTT-T---T-GG-TC----AAAT-TTT--CAT-A------G-----------TA-ATTTT--------G---TT
i Rattus_norvegicus.chr11                               C 0 I 8
s Rhinolophus_sinicus.LVEH01000179.1                      1792736 34 +   2252614 AGATTTT---T-GG-TC----AGGC-ATT--CAT-A------G-----------CA-ACCTT--------A---TG
i Rhinolophus_sinicus.LVEH01000179.1                    I 2 I 8
s Saiga_tatarica.SaiTat_scaffold_371890                      1030 33 -      4338 AGATT-T---T-CA-TC----AGGT-ATT--CAT-A------C-----------CA-ACCTT--------A---TG
i Saiga_tatarica.SaiTat_scaffold_371890                 I 2 I 8
s Saimiri_boliviensis.NW_024100938.1                     15676670 32 -  43202129 A-TTT-T---T-GG-TC----AGAT-ATG--CAT-A------G-----------CA-AATCT--------A---TG
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        8583 32 +     34089 A-TTT-T---T-GG-TC----AGAT-ATG--CAT-A------G-----------CA-AATCT--------A---TG
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              8523 32 -     60842 A-TTT-T---T-GG-TC----AGAT-ATG--CAT-A------G-----------CA-AATCT--------A---TG
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              8617 32 +     67014 A-TTT-T---T-GG-TC----AGAT-ATG--CAT-A------G-----------CA-AATCT--------A---TG
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              8594 32 +     60816 A-TTT-T---T-GG-TC----AGAT-ATG--CAT-A------G-----------CA-AATCT--------A---TG
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 8531 32 -     76454 A-TTT-T---T-GG-TC----AGAT-ATG--CAT-A------G-----------CA-AATCT--------A---TG
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17345316 32 -  30362882 A-TTT-T---T-GG-TC----AGAT-ATG--CAT-A------G-----------CA-AATCT--------A---TG
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         24637 32 -     62485 A-TTT-T---T-GG-TC----AGAT-ATG--CAT-A------G-----------CA-AATCT--------A---TG
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   39753 33 -    114521 CAATT-T---G-AG-TC----AGGT-ATT--CAT-A------G-----------GA-AATTT--------A---TA
i Scalopus_aquaticus.ScaAqu_scaffold_9300               I 2 I 13
s Sigmodon_hispidus.SigHis_scaffold_11332                  105579 32 -    120886 A-GTT-T---T-GG-CC----AGAT-TTT--CAT-A------T-----------CA-ATTCT--------G---TT
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 I 9
s Solenodon_paradoxus.SolPar_flattened_line_1012            23673 32 +    739146 A-ATT-T---T-AG-TC----AGGT-ATT--CTT-A------G-----------TA-ACTTT--------A---TG
i Solenodon_paradoxus.SolPar_flattened_line_1012        I 2 I 8
s Sorex_araneus.JH798170.1                               17773764 23 -  27805282 ----------------c----atta-gtg--ttc-a------g-----------gg-accat--------g---ca
i Sorex_araneus.JH798170.1                              I 3650 I 46
s Spermophilus_dauricus.KZ294190.1                        2244182 30 +   2842873 A-TTT-T---T-GG-TC----AGAT-ATT--CAT-G------T-----------CA-AC--T--------A---TG
i Spermophilus_dauricus.KZ294190.1                      C 0 I 8
s Spilogale_gracilis.SpiGra_flattened_line_905             238947 23 -    276980 -------------G-TG----AGGT--TT--CAT-A------G-----------CA-GCGTT--------A---T-
i Spilogale_gracilis.SpiGra_flattened_line_905          I 5 I 6
s Suricata_suricatta.SurSur_flattened_line_20339            33335 31 +     62062 A-TTT-T---T-GG-TC----AGGG-AAT--CCT-A------G-----------TG-GCTTT--------A---T-
i Suricata_suricatta.SurSur_flattened_line_20339        I 4 I 9
s Sus_scrofa.CM000824.4                                 189275117 34 + 218635234 AGATC-T---T-CAATC----AGGT-ATT--CAT-A------G-----------TA-GGCTT--------A---AG
i Sus_scrofa.CM000824.4                                 I 2 I 8
s Symphalangus_syndactylus.tarseq_24                        18932 32 -  13920577 A-TTT-T---T-GG-TC----AGAT-ATG--CAT-A------G-----------CA-AATCT--------A---TG
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                2455 33 +     20549 AGATC-T---G-GG-TC----AGGT-ATT--CAT-A------G-----------CA-ATTTT--------A---TG
i Tadarida_brasiliensis.TadBra_scaffold_61492           I 2 I 8
s Tamandua_tetradactyla.TamTet_scaffold_26877               17416 25 +     45698 A-TTT-T---T-GG-TC----AGCT-ATT--CAT-A------G-----------CA-A------------------
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 I 7
s Tapirus_indicus.TapInd_scaffold_176                      810917 32 +   1148477 A-TTC-T---T-GG-TC----AGAA-ATT--CAT-A------G-----------AC-ACCTT--------A---TG
i Tapirus_indicus.TapInd_scaffold_176                   I 4 I 8
s Tapirus_terrestris.TapTer_scaffold_14939                  61559 32 +     99546 A-TTC-T---T-GG-TC----AGAA-ATT--CAT-A------G-----------AC-ACCTT--------A---TG
i Tapirus_terrestris.TapTer_scaffold_14939              I 4 I 8
s Theropithecus_gelada.CM009951.1                       194012052 32 - 194193292 A-TTT-T---T-GG-TC----AGAT-ATG--CAT-A------G-----------CA-AACCT--------A---TG
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                   528 25 -      3104 A-TTT-T---T-GA-AT----AACA-ACC--CTC-T------G-----------TC-A------------------
i Tolypeutes_matacus.TolMat_scaffold_475685             C 0 I 5
s Tonatia_saurophila.TonSau_scaffold_3334                  138219 33 -    259118 AGATT-T---T-GG-TT----AACT-ACT--CAC-A------G-----------CA-ACCAT--------A---TG
i Tonatia_saurophila.TonSau_scaffold_3334               I 2 I 8
s Trichechus_manatus.JH594618.1                          16089974 25 +  31416278 A-TTT-T---T-GA-TG----AGAT-ATT--CAT-A------G-----------CA-A------------------
i Trichechus_manatus.JH594618.1                         C 0 I 5
s Tupaia_chinensis.KB320831.1                             2797888 32 -   3938065 A-TTT-T---T-GG-TC----AGAT-ATT--CAG-A------G-----------CA-ACCCT--------A---TG
i Tupaia_chinensis.KB320831.1                           I 2433 T 2425
s Tupaia_tana.TupTan_flattened_line_68454                    9823 32 +     13056 A-TTT-T---T-GG-TC----AGAT-ATT--CAG-A------G-----------CA-ATCCT--------A---TG
i Tupaia_tana.TupTan_flattened_line_68454               C 0 I 8
s Tursiops_truncatus.MRVK01000923.1                      69317322 34 -  96451834 AGATT-T---CTGG-CC----AGGT-ATT--CAG-A------G-----------CA-ATCTT--------A---CA
i Tursiops_truncatus.MRVK01000923.1                     I 2 I 8
s Uropsilus_gracilis.UroGra_scaffold_4115                     218 32 +    136657 T-TTT-T---C-AG-TC----AGGT-ATT--CAT-A------A-----------GA-ACTTT--------A---TG
i Uropsilus_gracilis.UroGra_scaffold_4115               I 2 I 5
s Ursus_maritimus.KK498671.1                              6520852 22 +  28682327 -------------G-T-----AGgt--tt--cat-a------g-----------ca-gcttt--------a---t-
i Ursus_maritimus.KK498671.1                            I 7 I 6
s Varecia_rubra.k141_432109                                  9525 32 -     20643 A-CCT-T---T-GA-TC----AGAT-ATT--CAT-A------G-----------CA-ACTCT--------A---TA
i Varecia_rubra.k141_432109                             C 0 I 8
s Varecia_variegata.k141_775891                             29060 32 -     33872 A-CCT-T---T-GA-TC----AGAT-ATT--CAT-A------G-----------CA-ACTCT--------A---TA
i Varecia_variegata.k141_775891                         C 0 I 8
s Vicugna_pacos.KN269600.1                                1528360 31 -   2331223 AGATT-T-T-T-GG-TC----AAGT-ATT--CAT-A------G-----------CA-ATCTT--------------
i Vicugna_pacos.KN269600.1                              I 2 I 1
s Vulpes_lagopus.VulLag_flattened_line_2045                144532 31 -    281493 A-TTT-T---T-AG-TC----AGGC-GTT--CAT-A------G-----------TA-GCTTT--------G---T-
i Vulpes_lagopus.VulLag_flattened_line_2045             I 4 I 6
s Xerus_inauris.XerIna_scaffold_7898                       131678 30 -    134049 A-TTT-T---T-GG-TC----AGAT-ATT--CAT-A------G-----------CA-AC--T--------A---TG
i Xerus_inauris.XerIna_scaffold_7898                    C 0 I 8
s Zalophus_californianus.ZalCal_flattened_line_4097        220005 25 -    227762 -------------G-TT----AGGT--TTCTCAT-A------G-----------CA-GCTTT--------A---T-
i Zalophus_californianus.ZalCal_flattened_line_4097     I 7 I 6
s Ziphius_cavirostris.ZipCav_flattened_line_60625            2070 34 -     13665 AGATT-T---CTGG-CC----AGGT-ATT--CAC-A------G-----------CA-ACCTT--------A---CA
i Ziphius_cavirostris.ZipCav_flattened_line_60625       I 2 I 8
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Tragulus_javanicus.TraJav_scaffold_14717                   9488 743 +     90398 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Equus_przewalskii.ATBW01073585.1                          16581  0 +     92910 C
e Equus_caballus.CM000402.2                              13355091  0 +  41866177 C
e Equus_asinus.JREZ01000062.1                             5856591  0 -   7175178 C
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Zapus_hudsonius.ZapHud_scaffold_256618                      408  0 -      2259 C
e Jaculus_jaculus.JH725517.1                              8577673  0 +  11848649 C
e Hylobates_pileatus_a.tarseq_592                             37493  0 -     60944 C
e Hylobates_pileatus_b.ContigUN                                 14628631  0 -  25970782 C
e Allactaga_bullata.AllBul_scaffold_141108                    666  0 -      7259 C
e Hylobates_muelleri.k141_1139146                            1183  0 +      4161 C
e Hylobates_klossii.k141_468230                              3284  0 +      5464 C
e Hylobates_agilis.k141_1633646                              1767  0 -      2102 C
e Hylobates_abbotti.k141_1816750                             1797  0 +      3202 C
e Trachypithecus_pileatus.k141_1022309                       5226  0 +     13828 C
e Trachypithecus_phayrei.ctg3                            44662914  0 -  44834318 C
e Trachypithecus_obscurus.k141_1115109                       8130  0 -     28054 C
e Trachypithecus_melamera.k141_699241                        2986  0 -     24393 C
e Trachypithecus_leucocephalus.k141_381681                   3005  0 +     12481 C
e Trachypithecus_laotum.k141_760702                          4719  0 +     14371 C
e Trachypithecus_hatinhensis.k141_504423                     6067  0 -     15592 C
e Trachypithecus_germaini.k141_868450                        3883  0 -     11566 C
e Trachypithecus_geei.k141_670367                           46082  0 -     54611 C
e Trachypithecus_francoisi.k141_768164                       4689  0 -     14244 C
e Trachypithecus_cristatus.k141_1011511                      5261  0 -     12939 C
e Trachypithecus_crepusculus.k141_1588528                   23360  0 -     32910 C
e Trachypithecus_auratus.k141_738098                        29800  0 +     38948 C
e Tarsius_wallacei.k141_48636                               64696  0 +     65473 C
e Tarsius_lariang.k141_609102                               31387  0 +     42269 C
e Semnopithecus_vetulus.k141_1143185                        16479  0 +     30600 C
e Semnopithecus_schistaceus.k141_387461                     33457  0 +     42640 C
e Semnopithecus_priam.k141_410937                           40312  0 +     46263 C
e Semnopithecus_johnii.k141_785014                         121532  0 +    130994 C
e Semnopithecus_hypoleucos.k141_761524                      11528  0 +     20762 C
e Semnopithecus_entellus.k141_1572367                        6153  0 +     15331 C
e Rhinopithecus_strykeri.ctg4                            44859307  0 -  45163003 C
e Rhinopithecus_bieti.k119_554384                            2917  0 -     17045 C
e Pygathrix_nigripes_a.k141_101123                             8537  0 +     18040 C
e Pygathrix_nigripes_b.ctg79                                 6809148  0 +   6970761 C
e Pygathrix_cinerea.k141_374971                             32651  0 +     56732 C
e Presbytis_mitrata.k141_860013                              8661  0 +     14865 C
e Presbytis_comata.k141_672698                               8546  0 -     15069 C
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000036.1               26743271  0 +  26888534 C
e Piliocolobus_kirkii.k141_929665                            4788  0 +      7694 C
e Piliocolobus_gordonorum.k141_1270531                       5421  0 -     17985 C
e Piliocolobus_badius.k141_1987485                           4802  0 -      5908 C
e Nasalis_larvatus.k141_153429                              11264  0 +     48152 C
e Colobus_polykomos.k141_1406057                            19335  0 +     23629 C
e Colobus_guereza.LG08                                  147667351  0 + 156195979 C
e Colobus_angolensis.KN985967.1                          10889423  0 +  10971483 C
e Cephalopachus_bancanus.k141_702587                        12545  0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530  0 +    345090 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               17687 26 +    209709 TCACTA-G---ACAT-A---AGTCCC-TT-CTA-----CC----C
s Acinonyx_jubatus.LLWD01000356.1                         2039659 18 +   3721120 ------------CAT-A---TATCCT-AG-CTA-----CT----C
i Acinonyx_jubatus.LLWD01000356.1                       I 9 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    117910 26 -    189883 CTAGTA-G---ACAC-A---AATCCT-TT-ACA-----TC----C
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 14 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10663612 26 +  23371972 TCACTA-G---ACTT-A---TGTCCT-AG-CTA-----CT----C
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 6 C 0
s Ailurus_fulgens.LNAC01000003.1                          7100141 26 -  16596857 TCACTA-G---ACAT-A---TGTCCT-AG-TTA-----CT----C
i Ailurus_fulgens.LNAC01000003.1                        I 6 C 0
s Allenopithecus_nigroviridis.k141_2469532                   5560 26 -     60446 TCACTA-G---ACAT-A---TGTCCC-TG-CGA-----CC----C
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         6277 26 -     29318 TCACTA-G---ACAT-A---TGTCCC-TG-CAA-----CC----C
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         5215 26 +     38766 TCACTA-G---ACAT-A---TGTCCC-TG-AGA-----CC----C
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          6171 26 -     80423 TCACTA-G---ACAT-A---TGTCCC-TG-AGA-----CC----C
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              1154 26 +     19852 TCACTA-G---ACAT-A---TGTCCC-TG-CTA-----CC----C
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                3398 26 -     12443 TCACTA-G---ACAT-A---TGTCCC-TG-CTA-----CC----C
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                              697 26 +      5070 TCACTA-G---ACAT-A---TGTCCC-TG-CTA-----CC----C
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                  442 26 -      1641 TCACTA-G---ACAT-A---TGTCCC-TG-CTA-----CC----C
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          3181 26 -     24210 TCACTA-G---ACAT-A---TGTCCC-TG-CTA-----CC----C
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           29763 26 -     30219 TCACTA-G---ACAT-A---TGTCCC-TG-CTA-----CC----C
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_405616                              5599 26 +     16794 TCACTA-G---ACAT-A---TGTCCC-TG-CTA-----CC----C
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                             731 26 -      1470 TCACTA-G---ACAT-A---TGTTCC-TG-CTA-----CC----C
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             4876 26 -      9835 TCACTA-G---ACAT-A---TGTTCC-TG-CTA-----CC----C
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3525669 25 +   4113121 TCTCTA-G---ACAT-A---TGCC-C-AG-CTA-----GC----T
i Ammotragus_lervia.NIVO01013474.1                      I 8 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      392703 25 -    631301 TCGCTG-G---ACAT-G---TGCCCT-AG-TTC------C----T
i Anoura_caudifer.AnoCau_scaffold_422                   I 8 I 1
s Antilocapra_americana.AntAmePen_scaffold_27338             3100 25 +     55446 TCTCTA-G---ACAT-A---TACC-C-AG-CTA-----CC----T
i Antilocapra_americana.AntAmePen_scaffold_27338        I 8 C 0
s Aotus_azarae.k141_3170768                                 66489 26 +     78111 TCATTA-G---ACAT-A---CGTCCC-TG-CTA-----CC----T
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            9435 26 +     22701 TCACTA-G---ACAT-A---TGTCCC-TG-CTA-----CC----T
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5753393 26 +   9889416 TCACTA-G---ACAT-A---TGTCCC-TG-CTA-----CC----T
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                             9991 26 -    104377 TCATTA-G---ACAT-A---TGTCCC-TG-CTA-----CC----T
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                               9998 26 +     23246 TCATTA-G---ACAT-A---TGTCCC-TG-CTA-----CC----T
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     2532 26 +     11424 TCACTA-G---ACAT-A---TGTCCT-TG-ATA-----TC----C
i Aplodontia_rufa.AprRuf_scaffold_101456                I 8 C 0
s Arctocebus_calabarensis.k141_587554                        6616 26 +      9265 TAACTA-G---ACAT-A---GGTCTT-TG-CTG-----CC----C
i Arctocebus_calabarensis.k141_587554                   I 8 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                11128 25 -     29036 TCTCTG-G---ACAT-G---TACCCT-AG-CTC------C----C
i Artibeus_jamaicensis.ArtJam_scaffold_41619            I 8 I 1
s Ateles_geoffroyi_b.tarseq_2582                             9543284 26 +  39197703 TCACTA-G---ACAT-A---TGTCCC-TG-CTA-----CC----C
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             64558 26 +     85812 TCACTA-G---ACAT-A---TGTCCC-TG-CTA-----CC----C
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                15571 26 +     89302 TCACTA-G---ACAT-A---TGTCCC-TG-CTA-----CC----C
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             20072 26 -     58268 TCACTA-G---ACAT-A---TGTCCC-TG-CTA-----CC----C
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             68066 26 +    119057 TCACTA-G---ACAT-A---TGTCCC-TG-CTA-----CC----C
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              10035 26 -     25888 TCACTA-G---ACAT-A---TGTCCC-TG-CTA-----CC----C
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                11100 26 -     16375 TCACTA-G---ACAT-C---GGTCCT-TG-CTG-----CA----C
i Avahi_laniger.k141_2840928                            I 8 C 0
s Avahi_peyrierasi.k141_798820                               4716 26 +      6337 TCACTA-G---ACAT-C---GGTCCT-TG-CTG-----CA----C
i Avahi_peyrierasi.k141_798820                          I 8 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26384154 26 +  51448160 TCACTA-G---ACAT-A---TGTCCT-AG-ATA-----CT----C
i Balaenoptera_acutorostrata.KI537095.1                 I 8 C 0
s Balaenoptera_bonaerensis.DF502048.1                        9327 26 -     13118 TCACTG-G---ACAT-A---TGTCCT-AG-ATA-----CT----C
i Balaenoptera_bonaerensis.DF502048.1                   I 8 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   48131 25 -     72089 TCTCTA-G---ACAT-A---TGCC-C-AG-CTA-----GC----C
i Beatragus_hunteri.BeaHun_scaffold_21644               I 8 C 0
s Bison_bison.KN264915.1                                   302275 25 -   6870073 TCTCTA-G---ACAT-A---TGCC-C-AG-CTA-----CA----C
i Bison_bison.KN264915.1                                I 8 C 0
s Bos_indicus.CM003021.1                                 22956373 25 + 161108492 TCTCTA-G---ACAT-A---TGCC-C-AG-CTT-----CA----T
i Bos_indicus.CM003021.1                                I 8 C 0
s Bos_mutus.JH883513.1                                     418638 25 +    998990 TCTCTA-G---ACAT-A---TGCC-C-AG-CTA-----CA----C
i Bos_mutus.JH883513.1                                  I 8 C 0
s Bos_taurus.CM000177.6                                  22665027 25 + 158972876 TCTCTA-G---ACAT-A---TGCC-C-AG-CTT-----CA----T
i Bos_taurus.CM000177.6                                 I 8 C 0
s Bubalus_bubalis.KI419065.1                               674791 25 +   1914593 TCTCTA-G---ACAT-A---TGCC-C-AG-CTA-----CC----C
i Bubalus_bubalis.KI419065.1                            I 8 C 0
s Cacajao_ayresi.k141_724503                               117938 26 -    171031 TCACTA-G---ACAT-A---TGTCCC-TG-CTA-----CC----C
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 16958 26 +    125063 TCACTA-G---ACAT-A---TGTCCC-TG-CTA-----CC----C
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                19005 26 -    216513 TCACTA-G---ACAT-A---TGTCCC-TG-CTA-----CC----C
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       11548 26 -    134917 TCACTA-G---ACAT-A---TGTCCC-TG-CTA-----CC----C
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3223284 26 -   8989139 TCACTA-A---ACAT-A---TGTCCT-AG-CTA-----CC----C
i Camelus_bactrianus.KN276303.1                         I 1 C 0
s Camelus_dromedarius.KN271192.1                           400985 26 -  15254737 TCACTA-A---ACAT-A---TGTCCT-AG-CTA-----CC----C
i Camelus_dromedarius.KN271192.1                        I 1 C 0
s Camelus_ferus.KB016973.1                                2976722 26 +   6889770 TCACTA-A---ACAT-A---TGTCCT-AG-CTA-----CC----C
i Camelus_ferus.KB016973.1                              I 1 C 0
s CanFam4.chr31                                          11526489 26 +  39901454 TCACTA-G---ACAT-A---TGTCCT-CA-CTA-----CT----C
i CanFam4.chr31                                         I 6 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   21463 26 +     87036 TCACTA-G---ACAT-A---TGTCCT-CA-CTA-----CT----C
i Canis_lupus_VD.CanFam_VD_scaffold_16982               I 6 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11273172 26 -  35597290 TCACTA-G---ACAT-A---TGTCCT-CA-CTA-----CT----C
i Canis_lupus_dingo.QKWQ01001993.1                      I 6 C 0
s Canis_lupus_familiaris.chr31                           11095883 26 +  39895921 TCACTA-G---ACAT-A---TGTCCT-CA-CTA-----CT----C
i Canis_lupus_familiaris.chr31                          I 6 C 0
s Canis_lupus_orion.HG994411.1                           16462668 26 -  44759192 TCACTA-G---ACAT-A---TGTCCT-CA-CTA-----CT----C
i Canis_lupus_orion.HG994411.1                          I 6 C 0
s Capra_aegagrus.CM003214.1                              21333611 25 + 157394656 TCTCTA-G---ACAT-A---TGCC-C-AG-CTA-----GC----C
i Capra_aegagrus.CM003214.1                             I 8 C 0
s Capra_hircus.CM004562.1                               135711966 25 - 157403528 TCTCTA-G---ACAT-A---TGCC-C-AG-CTA-----GC----C
i Capra_hircus.CM004562.1                               I 8 C 0
s Capromys_pilorides.CapPil_scaffold_529800                   354 26 -      2320 TCACTG-G---ACAT-T---TGACCT-TG-ACA-----CC----C
i Capromys_pilorides.CapPil_scaffold_529800             I 8 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               62121 25 +     67245 TCGCTG-G---ACAT-G---TGCCCT-AG-CTC------C----C
i Carollia_perspicillata.CarPer_scaffold_4436           I 8 I 1
s Castor_canadensis.CasCan_scaffold_417865                    327 25 -       402 TCAGTA-C---ACAT-A---TGTCCT-TG-A-A-----CC----C
i Castor_canadensis.CasCan_scaffold_417865              I 8 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   162804 23 -    276539 ---CCA-G---ACAT-A---TGTCCT-AG-CTG-----CC----C
i Catagonus_wagneri.CatWag_scaffold_1305                I 8 C 0
s Cavia_aperea.AVPZ01000278.1                            15789822 26 -  24422027 TCACTA-G---ACAT-A---CGACCT-TG-ATA-----CC----G
i Cavia_aperea.AVPZ01000278.1                           I 8 C 0
s Cavia_porcellus.DS562889.1                             15801761 26 -  24440124 TCACTA-G---ACAT-A---CGACCT-TG-ATA-----CC----G
i Cavia_porcellus.DS562889.1                            I 8 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       179933 26 +    436027 TCACTA-G---ACAT-A---CGACCT-TG-ATA-----CC----G
i Cavia_tschudii.CavTsc_scaffold_488                    I 8 C 0
s Cebus_albifrons.Contig22                               18895660 26 -  29618158 TCACTA-G---ACAT-A---TGTCCC-TG-CTA-----CC----T
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                12310 26 -     26817 TCACTA-G---ACAT-A---TGTCCC-TG-CTA-----CC----T
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                16554 26 +     25043 TCACTA-G---ACAT-A---TGTCCC-TG-CTA-----CC----T
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4367724 26 +   7569818 TCACTA-G---ACAT-A---TGTCCT-GG-CTA-----CC----C
i Ceratotherium_simum.JH767818.1                        I 8 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         7481 26 -      9338 TCACTA-G---ACAT-A---TGTCCT-GG-CTA-----CC----C
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    I 8 C 0
s Cercocebus_atys.KQ010443.1                              6559501 26 +   6739814 TCACTA-G---ACAT-A---TGTCCC-TG-CGA-----CC----C
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      30978 26 +     60454 TCACTA-G---ACAT-A---TGTCCC-TG-CGA-----CC----C
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          6182 26 -     21101 TCACTA-G---ACAT-A---TGTCCC-TG-CGA-----CC----C
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         63492 26 -    107033 TCACTA-G---ACAT-A---TGTCCC-TG-CGA-----CC----C
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        6355 26 -     17608 TCACTA-G---ACAT-A---TGTCCC-TG-CGA-----CC----C
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          3520 26 +     45019 TCACTA-G---ACAT-A---TGTCCC-TG-CGA-----CC----C
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           3796 26 +     15177 TCACTA-G---ACAT-A---TGTCCC-TG-CGA-----CC----C
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          6402 26 +     16677 TCACTA-G---ACAT-A---TGTCCC-TG-CGA-----CC----C
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           28592 26 +     35983 TCACTA-G---ACAT-A---TGTCCC-TG-CGA-----CC----C
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11995123 26 +  12117833 TCACTA-G---ACAT-A---TGTCCC-TG-CGA-----CC----C
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46482099 26 +  46592721 TCACTA-G---ACAT-A---TGTCCC-TG-CGA-----CC----C
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                        216 26 -     27215 TCACTA-G---ACAT-A---TGTCCC-TG-CGA-----CC----C
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       6416 26 +     35577 TCACTA-G---ACAT-A---TGTCCC-TG-CGA-----CC----C
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        6210 26 -     25661 TCACTA-G---ACAT-A---TGTCCC-TG-CGA-----CC----C
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        6382 26 -     17744 TCACTA-G---ACAT-A---TGTCCC-TG-CGA-----CC----C
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        25751 26 +     37128 TCACTA-G---ACAT-A---TGTCCC-TG-CGA-----CC----C
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           4718 26 -      6963 TCACGA-G---ACAT-C---TATCCT-AT-CTA-----CC----C
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      I 5 C 0
s Cheirogaleus_major.k141_1157592                           63325 26 -     68416 TCACTA-G---ATAT-C---TGTCCT-TG-CTG-----CC----C
i Cheirogaleus_major.k141_1157592                       I 8 C 0
s Cheirogaleus_medius.k141_133808                           12431 26 +     13308 TCACTA-G---ATAT-C---TGTCCT-TG-CTG-----CC----C
i Cheirogaleus_medius.k141_133808                       I 8 C 0
s Cheracebus_lucifer.k141_619653                             9597 26 -     18223 TCACTA-G---ACAT-A---TGTCCC-TG-CTA-----CC----T
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              1335 26 +    188999 TCACTA-G---ACAT-A---TGTCCC-TG-CTA-----CC----T
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           45634 26 +     57117 TCACTA-G---ACAT-A---TGTCCC-TG-CTA-----CC----T
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          50314 26 +     54541 TCACTA-G---ACAT-A---TGTCCC-TG-CTA-----CC----T
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15964507 26 +  43084221 TCACTA-G---ATCT-A---TGACCT-TG-ATA-----CC----C
i Chinchilla_lanigera.JH721867.1                        I 8 C 0
s Chiropotes_israelita.k141_1189915                         75117 26 +    196370 TCACTA-G---ACAT-A---CATCCC-TG-CTA-----CC----C
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          19298 26 +     40510 TCACTA-G---ACAT-A---CATCCC-TG-CTA-----CC----C
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15143936 26 -  15256731 TCACTA-G---ACAT-A---TGTCCC-TG-CGA-----CC----C
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      38400 26 -     53260 TCACTA-G---ACAT-A---TGTCCC-TG-CGA-----CC----C
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101148959 26 + 101219884 TCACTA-G---ACAT-A---TGTCCC-TG-CGA-----CC----C
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                18827 26 -     21363 ACACTC-A---ACAT-C---TATCCT-AA-CTA-----CC----C
i Choloepus_didactylus.ChoDid_scaffold_36182            I 7 I 1
s Choloepus_hoffmanni.KN194586.1                           764131 26 +    964067 ACACTC-A---ACAT-C---TATCCT-AA-CTA-----CC----C
i Choloepus_hoffmanni.KN194586.1                        I 7 I 1
s Chrysochloris_asiatica.ChrAsi_scaffold_629495              2367 27 -      3120 TAACTCTG---ACAC-A---TATTCT-GT-CTA-----CT----G
i Chrysochloris_asiatica.ChrAsi_scaffold_629495         I 5 C 0
s Condylura_cristata.JH655880.1                          60622336  5 +  78930452 -----------A-AT-T---T------------------------
i Condylura_cristata.JH655880.1                         I 13 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         2661 13 -      5782 TCATTC-A---ACAT-A---T------------------------
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    I 8 I 4
s Cricetomys_gambianus.CriGam_scaffold_949                 282796 30 -    399297 CTATGA-G---ATAC-A---AATCCT-TC-ATG-----CTACTTC
i Cricetomys_gambianus.CriGam_scaffold_949              I 8 C 0
s Cricetulus_griseus.LT883672.1                          53035166 26 +  72327488 CTACTA-G---ACAC-A---AATCCT-TC-ATG-----CC----C
i Cricetulus_griseus.LT883672.1                         I 8 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              2066 30 -     22648 CACCTT-A---ACCT-C---TGTCTCTGT-CTCTAT--CT----C
i Crocidura_indochinensis.CroInd_scaffold_27484         I 37 I 153
s Cryptoprocta_ferox.CryFer_flattened_line_19014            57645 18 -     70449 ------------CAT-A---TATCCT-AG-CTA-----CT----C
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 9 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  214410 26 -    956709 CCACCA-G---GCAT-T---TGTCCT-TG-ATA-----GC----C
i Ctenodactylus_gundi.CteGun_scaffold_447               I 10 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 34474 26 -     67205 TCACTA-C---ACAT-T---TGACCT-TG-ATA-----GC----C
i Ctenomys_sociabilis.CteSoc_scaffold_19489             I 8 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                20994 27 +     26546 TCACTA-G---ACATTA---CAACCT-TG-ATA-----CT----C
i Cuniculus_paca.CunPac_flattened_line_16637            I 8 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             62134 26 -    236241 TCACTA-G---ACAT-A---CTACCT-TG-ATA-----CC----C
i Dasyprocta_punctata.DasPun_flattened_line_634         I 8 C 0
s Dasypus_novemcinctus.JH568778.1                          185799 26 -   6883506 TCACTA-G---ACAT-C---TATCCT-AT-CTA-----CT----C
i Dasypus_novemcinctus.JH568778.1                       I 5 C 0
s Daubentonia_madagascariensis.ctg11                     16849260 26 +  31942871 TCACTA-G---ACAT-A---TGGCCT-TG-CTG-----CC----C
i Daubentonia_madagascariensis.ctg11                    I 8 C 0
s Delphinapterus_leucas.KZ290064.1                       80040777 26 -  96802777 TCACTA-G---ACAT-A---TGTCCC-AG-ATA-----CT----C
i Delphinapterus_leucas.KZ290064.1                      I 8 C 0
s Desmodus_rotundus.KZ672188.1                           18701336 25 -  18957592 CCACTG-G---ACGT-G---TGCCCT-AG-CCC------C----C
i Desmodus_rotundus.KZ672188.1                          I 8 I 1
s Dicerorhinus_sumatrensis.PEKH010003161.1                 326373 26 +    993696 TCACTA-G---ACAT-A---TGTCCT-GG-CTA-----CC----C
i Dicerorhinus_sumatrensis.PEKH010003161.1              I 10 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   7012 26 +    151128 TCACTA-G---ACAT-A---TGTCCT-GG-CTA-----CC----C
i Diceros_bicornis.DicBicMic_scaffold_9545              I 8 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   159769 26 +    228994 TCACTA-G---ACAT-A---TGACCT-TG-GTA-----CC----C
i Dinomys_branickii.DinBra_scaffold_1996                I 8 I 2
s Dipodomys_ordii.KN672545.1                              3660484 26 +   4240102 TCATTA-G---ACAC-A---TGGCCT-TG-GTA-----CC----C
i Dipodomys_ordii.KN672545.1                            I 8 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  2838 26 -     11986 TCATTA-G---ACAC-A---TGGCCT-TG-GTA-----CC----C
i Dipodomys_stephensi.DipSte_scaffold_84338             I 8 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                40717 27 -     73477 TCACTA-G---ACAT-A---CAACCT-TGAATA-----CC----C
i Dolichotis_patagonum.DolPat_scaffold_14102            I 8 C 0
s Echinops_telfairi.JH980316.1                           23000034 27 -  44670279 TAACTATG---ACAG-A---TATAGT-AG-CTA-----TC----C
i Echinops_telfairi.JH980316.1                          I 5 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1496347 25 +   1727528 TCTCTA-G---ACAT-A---TGCC-C-AG-CTA-----CC----C
i Elaphurus_davidianus.JRFZ01086400.1                   I 8 C 0
s Elephantulus_edwardii.JH947210.1                        7833086 31 +  15467074 TTACTTTG---GTAT-A---CATTCT-AG-CTATTTA-TT----C
i Elephantulus_edwardii.JH947210.1                      I 5 C 0
s Ellobius_lutescens.LOEQ01003611.1                        243964 26 -    369425 CTACTA-A---ACAT-A---AATCCT-TC-ATA-----TC----C
i Ellobius_lutescens.LOEQ01003611.1                     I 8 C 0
s Enhydra_lutris.KZ291749.1                              85877605 26 +  99434291 TCACTA-G---ACAT-A---TGTCCT-AG-CTA-----CT----C
i Enhydra_lutris.KZ291749.1                             I 6 C 0
s Eptesicus_fuscus.JH977687.1                             4709095 26 +   6522550 TCACTG-G---ACAT-A---TATCTT-AG-GTA-----CC----A
i Eptesicus_fuscus.JH977687.1                           I 8 I 2
s Erinaceus_europaeus.JH835290.1                         11541447 18 +  16010500 ----------------A---TGTACCCTC-ACC--AACCT-----
i Erinaceus_europaeus.JH835290.1                        I 14 C 0
s Erythrocebus_patas.Contig8                             48780969 26 -  48907691 TCACTA-G---ACAT-A---TGTCCC-TG-CGA-----CC----C
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          318997 26 +    330699 TCACTA-G---ACAT-A---TGTCCT-AG-ATA-----CT----C
i Eschrichtius_robustus.EscRob_flattened_line_685       I 8 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             65454 26 +     89355 TCACTA-G---ACAT-A---TGTCCT-AG-ATA-----CT----C
i Eubalaena_japonica.EubJap_flattened_line_7756         I 8 C 0
s Eulemur_albifrons.k141_715837                              9413 26 +     13586 TCACTA-G---ACAT-C---TGTCCT-TG-CTG-----CC----C
i Eulemur_albifrons.k141_715837                         I 113 C 0
s Eulemur_collaris.k141_1015201                              2675 26 -      4292 TCACTA-G---ACAT-C---TGTCCT-TG-CTG-----CC----C
i Eulemur_collaris.k141_1015201                         I 8 C 0
s Eulemur_coronatus.k141_3240342                            15809 26 +     36558 TCACTA-G---ACAT-C---TGTCCT-TG-CTG-----CC----C
i Eulemur_coronatus.k141_3240342                        I 8 C 0
s Eulemur_flavifrons.k141_903901                            12134 26 +     60246 TCACTA-G---ACAT-C---TGTCCT-TG-CTG-----CC----C
i Eulemur_flavifrons.k141_903901                        I 8 C 0
s Eulemur_fulvus.k141_653297                                15616 26 +    109717 TCACTA-T---ACAT-C---TGTCCT-TG-CTG-----CC----C
i Eulemur_fulvus.k141_653297                            I 8 C 0
s Eulemur_macaco.k141_747087                                 3602 26 -     19505 TCACTA-G---ACAT-C---TGTCCT-TG-CTG-----CC----C
i Eulemur_macaco.k141_747087                            I 8 C 0
s Eulemur_mongoz.k141_825972                                20274 26 +     27497 TCACTA-G---ACAT-C---TGTCCT-TG-CTG-----CC----C
i Eulemur_mongoz.k141_825972                            I 8 C 0
s Eulemur_rubriventer.k141_411740                           22730 26 +     26808 TCACTA-G---ACAT-C---TGTCCT-TG-CTG-----CC----C
i Eulemur_rubriventer.k141_411740                       I 8 C 0
s Eulemur_rufus.k141_1620292                                37465 26 +     46535 TCACTA-G---ACAT-C---TGTCCT-TG-CTG-----CC----C
i Eulemur_rufus.k141_1620292                            I 8 C 0
s Eulemur_sanfordi.k141_186399                              20203 26 -     29447 TCACTA-T---ACAT-C---TGTCCT-TG-CTG-----CC----C
i Eulemur_sanfordi.k141_186399                          I 8 C 0
s Felis_catus.AANG03133801.1                                  700 18 -       736 ------------CAT-A---TATTCT-AG-CTA-----CT----C
i Felis_catus.AANG03133801.1                            I 9 C 0
s Felis_catus_fca126.CM031420.1                         129286054 18 - 158578461 ------------CAT-A---TATTCT-AG-CTA-----CT----C
i Felis_catus_fca126.CM031420.1                         I 9 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 27153 18 +     52776 ------------CAT-A---TATTCT-AG-CTA-----CT----C
i Felis_nigripes.FelNig_flattened_line_8080             I 9 C 0
s Fukomys_damarensis.KN123630.1                          13896281 26 -  19261668 TCGTTA-G---ACAT-A---TGACCT-TG-ACA-----CC----C
i Fukomys_damarensis.KN123630.1                         I 8 C 0
s Galago_moholi.ctg555                                     215463 26 -    847004 TAACTA-G---ATAT-A---CGTCTT-TG-CTG-----CC----C
i Galago_moholi.ctg555                                  I 8 C 0
s Galago_senegalensis.k141_964197                           17824 26 -     43889 TAACTA-G---ATAT-A---CGTCTT-TG-CTG-----CC----C
i Galago_senegalensis.k141_964197                       I 8 C 0
s Galagoides_demidoff.k141_1769638                          14968 26 +     27357 TAACTA-G---ATAT-A---TGTCTT-TG-CTG-----CC----C
i Galagoides_demidoff.k141_1769638                      I 8 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               159713 26 +    324696 TCACTA-G---ACAT-A---TGTTCT-AG-CTA-----CC----A
i Galeopterus_variegatus.GalVar_scaffold_354            I 8 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    186145 25 -    189561 TCTCTA-G---ACAT-A---TGCC-C-AG-CTA-----CC----C
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 8 C 0
s Glis_glis.GliGli_scaffold_79770                           16608 26 -     18683 TCACTA-G---ACAT-A---TGTCCT-CA-ATA-----CT----C
i Glis_glis.GliGli_scaffold_79770                       I 8 C 0
s Gorilla_beringei.k141_111300                               9384 26 -     14630 TCACTA-G---ACAT-A---TGTCCC-TG-CTA-----CC----C
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119656484 26 - 195582420 TCACTA-G---ACAT-A---TGTCCC-TG-CTA-----CC----C
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   79922 26 +    118900 TCACTA-G---ACAT-A---TGTCCT-CA-ATA-----CT----C
i Graphiurus_murinus.GraMur_scaffold_4493               I 8 C 0
s Hapalemur_alaotrensis.k141_1280836                         6196 26 +     10286 TCACTA-G---ACAT-C---TGTCCT-TG-CTG-----CC----C
i Hapalemur_alaotrensis.k141_1280836                    I 8 C 0
s Hapalemur_gilberti.k141_279011                             4674 26 -     11661 TCACTA-G---ACAT-C---TGTCCT-TG-TTG-----CC----T
i Hapalemur_gilberti.k141_279011                        I 8 C 0
s Hapalemur_griseus.k141_1387522                            10001 26 +     56096 TCACTA-G---ACAT-C---TGTCCT-TG-TTG-----CC----T
i Hapalemur_griseus.k141_1387522                        I 8 C 0
s Hapalemur_meridionalis.k141_186231                        33250 26 -     42470 TCACTA-G---ACAT-C---TGTCCT-TG-TTG-----CC----T
i Hapalemur_meridionalis.k141_186231                    I 8 C 0
s Hapalemur_occidentalis.k141_797938                        49873 26 -     54384 TCACTA-G---ACAT-C---TGTCCT-TG-CTG-----CC----C
i Hapalemur_occidentalis.k141_797938                    I 8 C 0
s Helogale_parvula.HelPar_flattened_line_22962              22783 18 +     53719 ------------AAT-A---TATCCT-AG-CTA-----CT----C
i Helogale_parvula.HelPar_flattened_line_22962          I 9 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                33016 25 -     91191 TCTCTA-G---ACAT-A---TGCC-C-AG-CTA-----GC----C
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 8 C 0
s Heterocephalus_glaber.JH602058.1                        2560772 26 +  31725842 TCATTA-G---ACAT-A---TGACCT-TG-ATA-----GC----C
i Heterocephalus_glaber.JH602058.1                      I 8 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               62998 27 +     73687 TCACTGTG---CTGT-C---TATCCT-AG-CTA-----CC----C
i Heterohyrax_brucei.HetBruBak_scaffold_25354           I 5 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              150779 26 +    277961 TCACTA-G---ACGT-A---TGTCCT-AG-GTA-----CT----C
i Hippopotamus_amphibius.HipAmp_scaffold_1308           I 8 C 0
s Hipposideros_armiger.JXIK01001052.1                      277268 26 -    479840 TCACTA-G---ACAT-A---TGTCCT-AG-CCA-----CC----T
i Hipposideros_armiger.JXIK01001052.1                   I 8 C 0
s Hipposideros_galeritus.HipGal_scaffold_7653                5740 26 +     86108 TCACTA-G---ACAT-A---TGTCCT-AG-CCA-----CC----T
i Hipposideros_galeritus.HipGal_scaffold_7653           I 8 C 0
s Hoolock_leuconedys.ctg315                                   350390 25 +    431944 TCACTA-G---ACAT-A---TATCCC-TA-CTA-----CC-----
i Hoolock_leuconedys.ctg315                                C 0 I 278
s Hyaena_hyaena.HyaHya_flattened_line_20729                 23255 18 -     67322 ------------CAT-A---TATCTT-AG-CTA-----CT----C
i Hyaena_hyaena.HyaHya_flattened_line_20729             I 9 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           21386 26 -    119109 TCACTA-G---ACAT-A---CGACCT-CG-ATA-----CC----C
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       I 8 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     9679 26 +     22540 TCACTA-A---GCAC-A---TGACCT-TG-ATG-----CT----C
i Hystrix_cristata.HysCri_scaffold_50788                I 8 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7130516 26 +  13083262 CCTCTA-G---ACAT-A---TGTCCT-TG-GTA-----CC----C
i Ictidomys_tridecemlineatus.JH393315.1                 I 8 C 0
s Indri_indri.k141_2197838                                   1720 26 +      3484 TCACTA-G---ACAT-C---TGTCCT-TG-CTG-----CC----C
i Indri_indri.k141_2197838                              I 8 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              12989 26 +     17520 TCACTA-G---ACAT-A---TGTCCT-AG-ATA-----CT----C
i Inia_geoffrensis.IniGeo_flattened_line_66725          I 8 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               27608 26 +     37189 TCACTA-G---ACAT-A---TGTCCT-AG-ATA-----CT----C
i Kogia_breviceps.KogBre_flattened_line_35920           I 8 C 0
s Lagothrix_lagothricha.k141_12968                          54153 26 -    147782 TCACTA-G---ACAT-A---TGCCCC-TG-CTA-----CC----T
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    5707 26 +     26176 TCACTG-G---ATAT-A---TGTCCT-AG-GTA-----TT----A
i Lasiurus_borealis.LasBor_scaffold_59542               I 8 I 2
s Lemur_catta.scaffold_1                                258411548 26 - 285822530 TCACTA-G---ACAT-C---TGTCCT-TG-CTG-----CC----C
i Lemur_catta.scaffold_1                                I 8 C 0
s Lepilemur_ankaranensis.k141_884009                        28862 26 +     39228 TCACTA-G---ACAT-C---TGTCCT-TG-CTG-----CC----C
i Lepilemur_ankaranensis.k141_884009                    I 8 C 0
s Lepilemur_dorsalis.k141_134267                            58226 26 +     63517 TCACTA-G---ACAT-C---TGTCCT-TG-CTG-----CC----C
i Lepilemur_dorsalis.k141_134267                        I 8 C 0
s Lepilemur_ruficaudatus.k141_574529                        36606 26 -     38897 TCACTA-G---ACAT-C---TGTCCT-TG-CTG-----CC----C
i Lepilemur_ruficaudatus.k141_574529                    I 8 C 0
s Lepilemur_septentrionalis.k141_710646                      2652 26 -     13103 TCACTA-G---ACAT-C---TGTCCT-TG-CTG-----CC----C
i Lepilemur_septentrionalis.k141_710646                 I 8 C 0
s Leptonychotes_weddellii.KB714749.1                      3091581 26 -   3498232 TCACTA-G---ACAT-A---GTTCCT-AG-CTA-----CT----C
i Leptonychotes_weddellii.KB714749.1                    I 6 C 0
s Lepus_americanus.LepAme_scaffold_62849                    21012 26 +     22452 CTATTA-G---ACTT-A---ATTCTT-TG-ATA-----CC----C
i Lepus_americanus.LepAme_scaffold_62849                I 8 C 0
s Lipotes_vexillifer.KE558548.1                            139923 26 +   3060487 TCACTA-G---ACAT-A---TGTCCT-AG-ATA-----CT----C
i Lipotes_vexillifer.KE558548.1                         I 8 C 0
s Lophocebus_aterrimus.ctg55                             19252590 26 +  19376315 TCACTA-G---ACAT-A---TGTCCC-TG-CGA-----CC----C
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           15413 26 +     84689 TAACTA-G---ACAT-A---TGTCTT-TG-CTG-----CC----C
i Loris_lydekkerianus.k141_550999                       I 8 C 0
s Loris_tardigradus.ctg97                                 3783152 26 +   6799190 TAACTA-G---ACAT-A---TGTCTT-TG-CTG-----CC----C
i Loris_tardigradus.ctg97                               I 8 C 0
s Loxodonta_africana.GL010040.1                          20598929 27 -  62548349 TCACTGTG---ATAC-A---TCTCCT-AG-CTA-----CC----C
i Loxodonta_africana.GL010040.1                         I 5 C 0
s Lycaon_pictus.CM007556.1                               11095339 26 +  39895028 TCACTA-G---ACAT-A---TGTCCT-CA-CTA-----CT----C
i Lycaon_pictus.CM007556.1                              I 6 C 0
s Macaca_arctoides.k141_2201161                             24341 26 +     74745 TCACTA-G---ACAT-A---TGTCCC-TG-CGA-----CC----C
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12710802 26 +  12821369 TCACTA-G---ACAT-A---TGTCCC-TG-CGA-----CC----C
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                3375 26 -     26467 TCACTA-G---ACAT-A---TGTCCC-TG-CGA-----CC----C
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           51246 26 +     63263 TCACTA-G---ACAT-A---TGTCCC-TG-CGA-----CC----C
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 3356 26 -     26361 TCACTA-G---ACAT-A---TGTCCC-TG-CGA-----CC----C
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 6546 26 -      7381 TCACTA-G---ACAT-A---TGTCCC-TG-CGA-----CC----C
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  49775 26 -     79256 TCACTA-G---ACAT-A---TGTCCC-TG-CGA-----CC----C
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196039873 26 + 196197964 TCACTA-G---ACAT-A---TGTCCC-TG-CGA-----CC----C
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11450043 26 +  11645122 TCACTA-G---ACAT-A---TGTCCC-TG-CGA-----CC----C
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   8729 26 -     46448 TCACTA-G---ACAT-A---TGTCCC-TG-CGA-----CC----C
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                6392 26 -     13212 TCACTA-G---ACAT-A---TGTCCC-TG-CGA-----CC----C
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 20072 26 -     55006 TCACTA-G---ACAT-A---TGTCCC-TG-CGA-----CC----C
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43845187 26 +  43892939 TCACTA-G---ACAT-A---TGTCCC-TG-CGA-----CC----C
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               21356 26 -     24607 TCACTA-G---ACAT-A---TGTCCC-TG-CGA-----CC----C
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               8726 26 -     27140 TCACTA-G---ACAT-A---TGTCCC-TG-CGA-----CC----C
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43441762 26 -  43563597 TCACTA-G---ACAT-A---TGTCCC-TG-CGA-----CC----C
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4454566 26 -   4543643 TCACTA-G---ACAT-A---CGTCCC-TG-CGA-----CC----C
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            152313 26 +    252755 TCACTA-A---GCGT-A---TGTCCT-AG-CTA-----CT----C
i Manis_javanica.JSZB01003966.1                         I 8 C 0
s Manis_pentadactyla.KN017078.1                             39903 26 +     58827 TCACTA-A---GCAT-A---TGTCCT-AG-CTA-----CT----C
i Manis_pentadactyla.KN017078.1                         I 8 C 0
s Marmota_marmota.CZRN01000005.1                         36878388 26 +  64221397 CCACTA-G---ACAT-A---TGTCCT-TG-GTA-----CC----C
i Marmota_marmota.CZRN01000005.1                        I 8 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       65731 29 -    234502 TCCCTA-G---GCAT-ACTGTGTCCT-AG-CTA-----CC----C
i Megaderma_lyra.MegLyr_scaffold_3562                   I 9 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             6497 26 -     87323 TTACTA-G---ACAT-A---TGTCCT-AG-CTA-----CT----C
i Mellivora_capensis.MelCap_flattened_line_15433        I 6 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 1425 13 +    115071 ---------------------ATCCT-TT-ATT-----CC----T
i Meriones_unguiculatus.MerUng_scaffold_9483            I 19 C 0
s Mesocricetus_auratus.KB708139.1                         1051685 26 -  26018355 CTGCTA-G---ACAT-A---AATCCT-TC-ATA-----CA----C
i Mesocricetus_auratus.KB708139.1                       I 8 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    2580 26 -     12939 TCACTA-G---ACAT-A---TGTCCT-AG-ATA-----CT----C
i Mesoplodon_bidens.MesBid_scaffold_96348               I 8 C 0
s Microcebus_murinus.CM007691.1                          16514580 26 +  47401472 TCACTA-G---ATAT-C---TGTCCT-TG-CTG-----CC----C
i Microcebus_murinus.CM007691.1                         I 8 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  41594 27 -     48017 TAATGATT---ACAA-A---TATACT-AG-CTA-----TC----C
i Microgale_talazaci.MicTal_scaffold_34660              I 5 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               25083 25 -     32043 TCACTG-G---ACAT-G---CGCCCT-AG-CTC------C----C
i Micronycteris_hirsuta.MicHir_scaffold_37978           I 8 I 1
s Microtus_ochrogaster.CM001673.1                        22824762 26 -  98408828 CTACTA-A---ACAT-A---AATCCT-TC-ATA-----TC----C
i Microtus_ochrogaster.CM001673.1                       I 8 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8213144 26 +  10048721 TCACTG-G---ACAT-G---CGTCCT-AC-CTA-----Cc----c
i Miniopterus_natalensis.LDJU01000022.1                 I 8 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            37633 26 +     45743 TCACTG-G---ACAT-G---CGTCCT-AC-CTA-----CC----C
i Miniopterus_schreibersii.MinSch_scaffold_24116        I 8 C 0
s Miopithecus_ogouensis.k141_2935907                         6308 26 +     29742 TCACTA-G---ACAT-A---TGTCCC-TG-CGA-----CC----C
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        17077 26 -    104932 TCACTA-G---ACAT-A---GTTCCT-AG-CTA-----CT----C
i Mirounga_angustirostris.MirAng_flattened_line_8852    I 6 C 0
s Mirza_zaza.k141_593947                                     5263 26 -     12809 TCAGTA-G---ACAT-C---TGTCCT-TG-CTG-----AC----C
i Mirza_zaza.k141_593947                                I 8 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 150370 26 +    154973 TCACTA-G---ACAT-A---TGTCCC-AG-ATA-----CT----C
i Monodon_monoceros.MonMon_M_scaffold_5598              I 8 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                163622 26 +    265003 TCACTG-G---ACAT-A---TGTCCT-AG-TTA-----CC----C
i Mormoops_blainvillei.MorMeg_scaffold_2952             I 8 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  6365 25 -     19904 TCTCTA-G---ACAT-A---CGCC-C-AG-CTA-----CC----C
i Moschus_moschiferus.MosMos_scaffold_78805             I 8 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  150458 18 -    168139 ------------CAT-A---TATCCT-AG-CTA-----CT----C
i Mungos_mungo.MunMun_flattened_line_8729               I 9 C 0
s Murina_feae.MurFea_scaffold_2254                          24557 26 -    100666 TCACTA-G---ACAT-A---TATCCT-AG-GTA-----CC----A
i Murina_feae.MurFea_scaffold_2254                      I 8 I 2
s Mus_caroli.LT608236.1                                  70771984 26 +  92629107 CTGCTA-G---ACAT-A---AATCCT-TT-ATG-----TC----C
i Mus_caroli.LT608236.1                                 I 8 C 0
s Mus_musculus.chr16                                     75494038 26 +  98207768 CTGCTA-G---ACAT-A---AATCCT-TT-ATG-----TC----C
i Mus_musculus.chr16                                    I 8 C 0
s Mus_pahari.LT608305.1                                  67560790 26 +  89017189 CTACTA-G---ACAT-A---AATCCT-TT-ATG-----TC----C
i Mus_pahari.LT608305.1                                 I 8 C 0
s Mus_spretus.CM004110.1                                 74336764 26 +  97876770 CTGCTA-G---ACAT-A---AATTCT-TT-ATG-----TC----C
i Mus_spretus.CM004110.1                                I 8 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             15013 26 +     98495 TCATTA-G---ACAT-A---TGTCCT-CA-ATA-----CG----C
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 8 C 0
s Mustela_putorius.JH417978.1                             4428335 13 -  28371801 ---------------------GTCCT-AG-CTA-----CT----C
i Mustela_putorius.JH417978.1                           I 5 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     93978 26 -    117718 TCACTA-G---ACAT-T---TGACCT-TG-ACA-----CC----G
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 8 I 1
s Myotis_brandtii.KE161952.1                               971429 26 +   8389877 TCACTG-A---ACAT-A---TATCCT-AG-GTA-----cc----a
i Myotis_brandtii.KE161952.1                            I 8 I 2
s Myotis_davidii.KB114863.1                               5022849 26 +   6462685 TCACTG-A---ACAT-A---TATCCT-AG-Gta-----cc----a
i Myotis_davidii.KB114863.1                             I 8 I 2
s Myotis_lucifugus.GL429887.1                             3468933 26 -   3747815 TCACTG-A---ACAT-A---TATCCT-AG-GTA-----cc----a
i Myotis_lucifugus.GL429887.1                           I 8 I 2
s Myotis_myotis.MyoMyo_scaffold_6123                        14174 26 +     66751 TCACTG-A---ACAT-A---TATCCT-AG-GTA-----CC----A
i Myotis_myotis.MyoMyo_scaffold_6123                    I 8 I 2
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             7775 26 -      8794 TCACTA-G---ACAT-C---TATCCT-AG-TTA-----CC----C
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        I 7 I 1
s Nannospalax_galili.KL201303.1                            120511 26 +    362372 CCACTA-A---ATGT-A---AATCCT-TG-ATA-----TC----C
i Nannospalax_galili.KL201303.1                         I 8 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4490475 26 -  14209539 TCACTA-G---ACAT-A---GTTCCT-AG-CTA-----CT----C
i Neomonachus_schauinslandi.NINY01007774.1              I 6 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3954961 26 -   4490290 TCACTA-G---ACAT-A---TGTCCT-AG-ATA-----CT----C
i Neophocaena_asiaeorientalis.KZ688543.1                I 8 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  50682 26 +     94413 TGACTG-G---ACAT-A---CATCCT-AG-CTA-----CC----C
i Noctilio_leporinus.NocLep_scaffold_12062              I 8 C 0
s Nomascus_annamensis.k141_762468                             376 26 -      2755 TCACTA-G---ACAT-A---TATCCC-TA-CTA-----CC----C
i Nomascus_annamensis.k141_762468                       C 0 C 0
s Nomascus_concolor.k141_70405                                996 26 +      1153 TCACTA-G---ACAT-A---TATCCC-TA-CTA-----CC----C
i Nomascus_concolor.k141_70405                          C 0 C 0
s Nomascus_gabriellae.k141_1400361                            927 26 -      2203 TCACTA-G---ACAT-A---TATCCC-TA-CTA-----CC----C
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_453                             6239 26 +     12787 TCACTA-G---ACAT-A---TATCCC-TA-CTA-----CC----C
i Nomascus_siki_b.tarseq_453                        C 0 C 0
s Nomascus_siki_a.k141_421408                                   841 26 +     16235 TCACTA-G---ACAT-A---TATCCC-TA-CTA-----CC----C
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                38204 26 +   3668941 TCACTA-G---ACAT-A---TGTCCT-CA-CTA-----CT----C
i Nyctereutes_procyonoides.CAJHUB010000786.1            I 6 C 0
s Nycticebus_bengalensis.LG16                            65572089 26 -  95554990 TAACTA-G---ACAT-A---TGTCTT-TG-CTG-----CC----C
i Nycticebus_bengalensis.LG16                           I 8 C 0
s Nycticebus_coucang.k141_771591                            15499 26 +     16181 TAACTA-G---ACAT-A---TGTCTT-TG-CTG-----CC----C
i Nycticebus_coucang.k141_771591                        I 8 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65680277 26 +  89412551 TAACTA-G---ACAT-A---TGTCTT-TG-CTG-----CC----C
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     I 8 C 0
s Ochotona_princeps.JH802095.1                            5000061 24 -  23139505 TTATTA-G---CCTT-T---ATTGTT-TA-ATG-----C------
i Ochotona_princeps.JH802095.1                          I 6 C 0
s Octodon_degus.JH651621.1                                3689465 26 +  10294119 TCACTA-G---ACAT-T---TGAACT-TG-ACA-----CT----G
i Octodon_degus.JH651621.1                              I 8 C 0
s Odobenus_rosmarus.KB229369.1                             685178 26 -   3126709 TCACTA-G---ACAT-A---TTTCCT-AG-CTA-----CT----C
i Odobenus_rosmarus.KB229369.1                          I 6 C 0
s Odocoileus_virginianus.KZ101650.1                       1083795 25 +   1425656 TCTCTA-G---ACAT-A---TGCC-C-AA-CTA-----CC----C
i Odocoileus_virginianus.KZ101650.1                     I 8 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         41879 25 +     78940 TCTTTA-G---ACAT-A---TGCC-C-AG-CTA-----CC----C
i Okapia_johnstoni.LVCL01S0017931.1                     I 8 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  130558 26 +    145789 CTAATA-A---ACAT-A---AATCCT-TC-ATA-----TC----C
i Ondatra_zibethicus.OndZib_scaffold_6821               I 8 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  43254 25 +     62360 CTACTA-G---ACAT-A---AATC-T-TT-ACA-----CC----C
i Onychomys_torridus.OnyTor_scaffold_12578              I 8 C 0
s Orcinus_orca.KB316965.1                                 7228635 26 -   7562323 TCACTA-G---ACAT-A---TGTCCT-AG-ATA-----CT----C
i Orcinus_orca.KB316965.1                               I 8 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              64369 27 -     66828 TCACTGTG---ACTT-A---TATCCA-AG-TTA-----CC----C
i Orycteropus_afer.OryAfe_flattened_line_13509          I 5 C 0
s Oryctolagus_cuniculus.CM000803.1                      141884029 26 + 163896628 CTATTA-G---ACTT-A---ATTCTT-TG-ATA-----CC----C
i Oryctolagus_cuniculus.CM000803.1                      I 8 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      315342 26 -    505867 TCACTA-G---ACAT-A---TGTCCT-CA-CTA-----CT----C
i Otocyon_megalotis.JAEUCK010005121.1                   I 6 C 0
s Otolemur_crassicaudatus.k141_505435                        5325 26 -     53940 TAACTA-G---ATAT-A---TGTCTT-TG-CTG-----CC----C
i Otolemur_crassicaudatus.k141_505435                   I 8 C 0
s Otolemur_garnettii.GL873528.1                          18013294 26 -  38779656 TAACTA-G---ATAT-A---CGTCTT-TG-CTG-----CC----C
i Otolemur_garnettii.GL873528.1                         I 8 C 0
s Ovis_aries.CM001582.2                                 134082802 25 - 275406953 GCTCTA-T---ACAT-A---TGCC-C-AG-CTA-----CC----C
i Ovis_aries.CM001582.2                                 I 8 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      84036 25 +    140051 TCTCTA-G---ACAT-A---TGCC-C-AG-CTA-----GC----C
i Ovis_canadensis.OviCan_scaffold_6251                  I 8 C 0
s Pan_paniscus.CM003386.1                               127578663 26 - 205426864 TCACTA-G---ATAT-A---TGTCCC-TG-CTA-----CC----C
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120155823 26 - 196562556 TCACTA-G---ATAT-A---TGTCCC-TG-CTA-----CC----C
i Pan_troglodytes.CM009241.2                            I 32 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  40073 18 +    295523 ------------CAT-A---TATCCT-AG-CTA-----CT----C
i Panthera_onca.PanOnc_flattened_line_1615              I 9 C 0
s Panthera_pardus.KV860323.1                              3643888 18 +  18214204 ------------CAT-A---TATCCT-AG-CTA-----CT----C
i Panthera_pardus.KV860323.1                            I 9 C 0
s Panthera_tigris.KE721879.1                              5033536 18 -   6340057 ------------CAT-A---TATCCT-AG-CTA-----CT----C
i Panthera_tigris.KE721879.1                            I 9 C 0
s Pantholops_hodgsonii.KE114631.1                         1071685 12 -   1292953 ---------------------GCC-C-AG-CTA-----GT----C
i Pantholops_hodgsonii.KE114631.1                       I 15 C 0
s Papio_anubis.CM001492.2                               188160551 26 - 188283584 TCACTA-G---ACAT-A---TGTCCC-TG-CGA-----CC----C
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              3641 26 +     25005 TCACTA-G---ACAT-A---TGTCCC-TG-CGA-----CC----C
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47517923 26 +  47705337 TCACTA-G---ACAT-A---TGTCCC-TG-CGA-----CC----C
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 71914 26 -    104429 TCACTA-G---ACAT-A---TGTCCC-TG-TGA-----CC----C
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   10446 26 +     14967 TCACTA-G---ACAT-A---TGTCCC-TG-CGA-----CC----C
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 6311 26 -      7628 TCACTA-G---ACAT-A---TGTCCC-TG-CGA-----CC----C
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    121560 18 -    135482 ------------CAT-A---TATCCT-AG-TTA-----CT----C
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 I 9 C 0
s Perodicticus_ibeanus.k141_117958                          10989 26 -     23713 TAACTA-G---ACAT-A---GGTCTT-TG-CTG-----CC----C
i Perodicticus_ibeanus.k141_117958                      I 8 C 0
s Perodicticus_potto.k141_1136815                           12140 26 +     61070 TAACTA-G---ACAT-A---GGTCTT-TG-CTG-----CC----C
i Perodicticus_potto.k141_1136815                       I 10 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       2405 26 +     49596 TCAGTA-G---ACAC-A---CATATT-TG-ATA-----CC----C
i Perognathus_longimembris.PerPac_flattened_line_19359  I 8 C 0
s Peromyscus_maniculatus.KI615518.1                       4955619 26 -   8017169 CTACTA-G---ATTT-A---AATCCT-TT-ATA-----CC----C
i Peromyscus_maniculatus.KI615518.1                     I 8 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    17459 26 -     36578 TTATTA-G---ATTT-A---TGACGT-TG-ATA-----TG----C
i Petromus_typicus.PetTyp_scaffold_33007                I 8 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              3102 26 +      8220 TCACTA-G---ACAT-A---TGTCCT-AG-ATA-----CT----C
i Phocoena_phocoena.PhoPho_flattened_line_53071         I 8 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            99720 26 +    112873 TCACAG-G---ACAT-A---TATCTT-AC-ATA-----CT----A
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        I 8 I 2
s Platanista_gangetica.PlaMin_flattened_line_72990           9573 26 +     21690 TCACTA-G---ACAT-A---TGTCCT-AG-ATA-----CT----C
i Platanista_gangetica.PlaMin_flattened_line_72990      I 8 C 0
s Plecturocebus_bernhardi.k141_959214                       26246 26 +     44506 TCACTA-G---ACAT-A---TGTCCC-TG-CTA-----CC----T
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        26459 26 +     67491 TCACTA-G---ACAT-A---TGTCCC-TG-CTA-----CC----T
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      16698 26 -     98129 TCACTA-G---ACAT-A---TGTCCC-TG-CTA-----CC----T
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     26299 26 +    147771 TCACTA-G---ACAT-A---TGTCCC-TG-CTA-----CC----T
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         2934 26 -     43940 TCACTA-G---ACAT-A---TGTCCC-TG-CTA-----CC----T
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          7017 26 -     55515 TCACTA-G---ACAT-A---TGTCCC-TG-CTA-----CC----T
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         26371 26 +    152463 TCACTA-G---ACAT-A---TGTCCC-TG-CTA-----CC----T
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       4179 26 -    119457 TCACTA-G---ACAT-A---TGTCCC-TG-CTA-----CC----T
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         16094 26 +    134592 TCACTA-G---ACAT-A---TGTCCC-TG-CTA-----CC----T
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          26681 26 -     75465 TCACTA-G---ACAT-A---TGTCCC-TG-CTA-----CC----T
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              191294 26 -    373494 TCACTA-G---ACAT-A---TGTCCC-TG-CTA-----CC----C
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19811941 26 +  19899266 TCACTA-G---ACAT-A---TGTCCC-TG-CTA-----CC----C
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                4103 27 -      9567 TCACTGTG---CTGT-C---TATCCT-AG-CTA-----CC----C
i Procavia_capensis.ProCapCap_scaffold_149274           I 5 C 0
s Prolemur_simus.MPIZ01000048.1                           6852922 26 +  12164890 TCACTA-G---ACAT-C---TGTCCT-TG-CTG-----CC----C
i Prolemur_simus.MPIZ01000048.1                         I 8 C 0
s Propithecus_coquerelli.NW_012147863.1                     21731 26 -     30946 NNNNNN-N---NNNN-N---NNNNNN-NN-NNN-----NN----N
i Propithecus_coquerelli.NW_012147863.1                 I 8 C 0
s Propithecus_coronatus.k141_1353159                         8008 26 +     11805 TCATTG-G---ACAT-C---TGTCTT-TG-CTG-----CC----C
i Propithecus_coronatus.k141_1353159                    I 8 C 0
s Propithecus_diadema.k141_577245                           47342 26 +     52369 TCACTG-G---ACAT-C---TGTCCT-TG-CTG-----CC----C
i Propithecus_diadema.k141_577245                       I 8 C 0
s Propithecus_edwardsi.k141_1317105                         39729 26 -     44753 TCACTG-G---ACAT-C---TGTCCT-TG-CTG-----CC----C
i Propithecus_edwardsi.k141_1317105                     I 8 C 0
s Propithecus_perrieri.k141_7554                            21652 26 +     27322 TCACTG-G---ACAT-C---TGTCCT-TG-CTG-----CC----C
i Propithecus_perrieri.k141_7554                        I 8 C 0
s Propithecus_tattersalli.k141_907138                       21301 26 -     53241 TCACTG-G---ACAT-C---TGTCCT-TG-CTG-----CC----C
i Propithecus_tattersalli.k141_907138                   I 8 C 0
s Propithecus_verreauxi.k141_158021                         43564 26 -     48185 TCACTG-G---ACAT-C---TGTCCT-TG-CTG-----CC----C
i Propithecus_verreauxi.k141_158021                     I 8 C 0
s Psammomys_obesus.NESX01026517.1                           38420 13 +     77221 ---------------------ATCAT-TT-ATT-----CC----T
i Psammomys_obesus.NESX01026517.1                       I 19 C 0
s Pteronotus_parnellii.KE867983.1                            6265 26 -     27784 TCACTG-G---ATAA-A---TGGCCT-AG-CTA-----CC----C
i Pteronotus_parnellii.KE867983.1                       I 8 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        250465 26 -    344369 TCACTA-G---ACAT-A---TGTCCT-AG-CTA-----CT----C
i Pteronura_brasiliensis.PteBra_flattened_line_1343     I 6 C 0
s Puma_concolor.QAVW01000427.1                          131540185 18 - 161321710 ------------CAT-A---TATCCT-AG-CTA-----CT----C
i Puma_concolor.QAVW01000427.1                          I 9 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                20660 25 +     68503 TCCCTA-G---ACAT-A---TGCC-C-AG-CTA-----CC----C
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 8 C 0
s Rattus_norvegicus.chr11                                13917820 29 +  90463843 CTACTA-CACTACAT-A---AATCCT-TT-ATA-----TC----C
i Rattus_norvegicus.chr11                               I 8 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1792778 26 +   2252614 TCACTA-G---ACAT-A---TGTCCT-AG-CCA-----TC----T
i Rhinolophus_sinicus.LVEH01000179.1                    I 8 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                      1071 25 -      4338 TCTCTA-G---ATAT-A---TGCC-C-AG-CTA-----CC----C
i Saiga_tatarica.SaiTat_scaffold_371890                 I 8 C 0
s Saimiri_boliviensis.NW_024100938.1                     15676702 26 -  43202129 TCACTA-G---ACCT-A---TGTCCC-TG-CTA-----CC----T
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        8615 26 +     34089 TCACTA-G---ACCT-A---TGTCCC-TG-CTA-----CC----T
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              8555 26 -     60842 TCACTA-G---ACCT-A---TGTCCC-TG-CTA-----CC----T
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              8649 26 +     67014 TCACTA-G---ACCT-A---TGTCCC-TG-CTA-----CC----T
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              8626 26 +     60816 TCACTA-G---ACCT-A---TGTCCC-TG-CTA-----CC----T
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 8563 26 -     76454 TCACTA-G---ACCT-A---TGTCCC-TG-CTA-----CC----T
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17345348 26 -  30362882 TCACTA-G---ACAT-A---TGTCCC-TG-CTA-----CC----T
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         24669 26 -     62485 TCACTA-G---ACAT-A---TGTCCC-TG-CTA-----CC----T
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   39799 18 -    114521 -----------A-AT-T---TGTT-CCAG-AT----A-CC----C
i Scalopus_aquaticus.ScaAqu_scaffold_9300               I 13 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  105620 26 -    120886 CTACTA-G---ATGT-A---AATTCT-TC-ATA-----TC----C
i Sigmodon_hispidus.SigHis_scaffold_11332               I 9 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            23713 30 +    739146 TCCCTA-G---ACCT-A---TGTCCCTAG-ACCGAT--CT----C
i Solenodon_paradoxus.SolPar_flattened_line_1012        I 8 C 0
s Sorex_araneus.JH798170.1                               17773833 24 -  27805282 tacctt-A---ATCT-C---TGATTATCT-CTC------------
i Sorex_araneus.JH798170.1                              I 46 I 104
s Spermophilus_dauricus.KZ294190.1                        2244220 26 +   2842873 CCTCTA-G---ACAT-A---TGTCCT-CG-GTA-----CC----G
i Spermophilus_dauricus.KZ294190.1                      I 8 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             238976 26 -    276980 TCACTA-G---ACAT-A---TGTCGT-AG-CTA-----CT----C
i Spilogale_gracilis.SpiGra_flattened_line_905          I 6 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            33375 18 +     62062 ------------CAT-A---TATCCT-AG-CTA-----CT----C
i Suricata_suricatta.SurSur_flattened_line_20339        I 9 C 0
s Sus_scrofa.CM000824.4                                 189275159 26 + 218635234 TCACCA-G---ACAT-A---TGTCCT-AG-CTA-----CC----C
i Sus_scrofa.CM000824.4                                 I 8 C 0
s Symphalangus_syndactylus.tarseq_24                        18964 26 -  13920577 TCACTA-G---ACAT-A---TATCCC-TA-CTA-----CC----C
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                2496 26 +     20549 GCACTG-G---ACAT-A---TGTCCT-AG-CCA-----CC----C
i Tadarida_brasiliensis.TadBra_scaffold_61492           I 8 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               17448 26 +     45698 TCACTA-G---ACAT-C---TATCCT-AG-TTA-----CC----C
i Tamandua_tetradactyla.TamTet_scaffold_26877           I 7 I 1
s Tapirus_indicus.TapInd_scaffold_176                      810957 26 +   1148477 TCACTA-G---CCAT-A---TGTCCT-GG-CTA-----CC----C
i Tapirus_indicus.TapInd_scaffold_176                   I 8 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  61599 26 +     99546 TCACTA-G---CCAT-A---TGTCCT-GG-CTA-----CC----C
i Tapirus_terrestris.TapTer_scaffold_14939              I 8 C 0
s Theropithecus_gelada.CM009951.1                       194012084 26 - 194193292 TCACTA-G---ACAT-A---TGTCCC-TG-CGA-----CC----C
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                   558 26 -      3104 TCACTA-G---ACAT-T---TATCCT-AT-CTA-----CC----C
i Tolypeutes_matacus.TolMat_scaffold_475685             I 5 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  138260 25 -    259118 TCACTG-G---ACAT-G---TGCCCT-AG-CTC------C----C
i Tonatia_saurophila.TonSau_scaffold_3334               I 8 I 1
s Trichechus_manatus.JH594618.1                          16090004 27 +  31416278 TCACTGTG---ATAT-A---TATCCT-AG-CTA-----CC----T
i Trichechus_manatus.JH594618.1                         I 5 C 0
s Tupaia_chinensis.KB320831.1                             2795495 26 -   3938065 CTAGTA-A---GTCT-A---TGCACA-AG-CTA-----CC----T
i Tupaia_chinensis.KB320831.1                           T 2425 I 2433
s Tupaia_tana.TupTan_flattened_line_68454                    9863 26 +     13056 TCAGTA-A---GTCT-A---TGCATA-AG-CTA-----CC----T
i Tupaia_tana.TupTan_flattened_line_68454               I 8 C 0
s Tursiops_truncatus.MRVK01000923.1                      69317364 26 -  96451834 TCACTA-G---ACAT-A---TGTCCT-AG-ATA-----CT----C
i Tursiops_truncatus.MRVK01000923.1                     I 8 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                     255 18 +    136657 ------------CAT-A---TATT-CTAG-AC----A-CC----T
i Uropsilus_gracilis.UroGra_scaffold_4115               I 5 C 0
s Ursus_maritimus.KK498671.1                              6520880 26 +  28682327 TCACTA-G---ACTT-A---TGTCCT-AG-CTA-----CC----C
i Ursus_maritimus.KK498671.1                            I 6 C 0
s Varecia_rubra.k141_432109                                  9565 26 -     20643 TTACTA-G---ACAT-C---TGTCCT-TG-CTG-----CC----C
i Varecia_rubra.k141_432109                             I 8 C 0
s Varecia_variegata.k141_775891                             29100 26 -     33872 TTACTA-G---ACAT-C---TGTCCT-TG-CTG-----CC----C
i Varecia_variegata.k141_775891                         I 8 C 0
s Vicugna_pacos.KN269600.1                                1528392 26 -   2331223 TCACTA-A---ACAT-A---TGTCCT-AG-CTA-----CC----C
i Vicugna_pacos.KN269600.1                              I 1 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                144569 26 -    281493 TCACTA-G---TCAT-A---TGTCCT-CA-CTA-----CT----C
i Vulpes_lagopus.VulLag_flattened_line_2045             I 6 C 0
s Xerus_inauris.XerIna_scaffold_7898                       131716 26 -    134049 CCACTA-G---ACAT-A---TGTCCT-TG-ATA-----CC----C
i Xerus_inauris.XerIna_scaffold_7898                    I 8 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        220036 26 -    227762 TCACTA-G---ACAT-A---TTTCCT-AG-CTA-----CT----C
i Zalophus_californianus.ZalCal_flattened_line_4097     I 6 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            2112 26 -     13665 TCACTA-G---ACAT-A---TGTCCT-AG-ATA-----CT----C
i Ziphius_cavirostris.ZipCav_flattened_line_60625       I 8 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Tragulus_javanicus.TraJav_scaffold_14717                   9488 743 +     90398 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Equus_przewalskii.ATBW01073585.1                          16581  0 +     92910 C
e Equus_caballus.CM000402.2                              13355091  0 +  41866177 C
e Equus_asinus.JREZ01000062.1                             5856591  0 -   7175178 C
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Zapus_hudsonius.ZapHud_scaffold_256618                      408  0 -      2259 C
e Jaculus_jaculus.JH725517.1                              8577673  0 +  11848649 C
e Hylobates_pileatus_a.tarseq_592                             37493  0 -     60944 C
e Hylobates_pileatus_b.ContigUN                                 14628631  0 -  25970782 C
e Allactaga_bullata.AllBul_scaffold_141108                    666  0 -      7259 C
e Hylobates_muelleri.k141_1139146                            1183  0 +      4161 C
e Hylobates_klossii.k141_468230                              3284  0 +      5464 C
e Hylobates_agilis.k141_1633646                              1767  0 -      2102 C
e Hylobates_abbotti.k141_1816750                             1797  0 +      3202 C
e Trachypithecus_pileatus.k141_1022309                       5226  0 +     13828 C
e Trachypithecus_phayrei.ctg3                            44662914  0 -  44834318 C
e Trachypithecus_obscurus.k141_1115109                       8130  0 -     28054 C
e Trachypithecus_melamera.k141_699241                        2986  0 -     24393 C
e Trachypithecus_leucocephalus.k141_381681                   3005  0 +     12481 C
e Trachypithecus_laotum.k141_760702                          4719  0 +     14371 C
e Trachypithecus_hatinhensis.k141_504423                     6067  0 -     15592 C
e Trachypithecus_germaini.k141_868450                        3883  0 -     11566 C
e Trachypithecus_geei.k141_670367                           46082  0 -     54611 C
e Trachypithecus_francoisi.k141_768164                       4689  0 -     14244 C
e Trachypithecus_cristatus.k141_1011511                      5261  0 -     12939 C
e Trachypithecus_crepusculus.k141_1588528                   23360  0 -     32910 C
e Trachypithecus_auratus.k141_738098                        29800  0 +     38948 C
e Tarsius_wallacei.k141_48636                               64696  0 +     65473 C
e Tarsius_lariang.k141_609102                               31387  0 +     42269 C
e Semnopithecus_vetulus.k141_1143185                        16479  0 +     30600 C
e Semnopithecus_schistaceus.k141_387461                     33457  0 +     42640 C
e Semnopithecus_priam.k141_410937                           40312  0 +     46263 C
e Semnopithecus_johnii.k141_785014                         121532  0 +    130994 C
e Semnopithecus_hypoleucos.k141_761524                      11528  0 +     20762 C
e Semnopithecus_entellus.k141_1572367                        6153  0 +     15331 C
e Rhinopithecus_strykeri.ctg4                            44859307  0 -  45163003 C
e Rhinopithecus_bieti.k119_554384                            2917  0 -     17045 C
e Pygathrix_nigripes_a.k141_101123                             8537  0 +     18040 C
e Pygathrix_nigripes_b.ctg79                                 6809148  0 +   6970761 C
e Pygathrix_cinerea.k141_374971                             32651  0 +     56732 C
e Presbytis_mitrata.k141_860013                              8661  0 +     14865 C
e Presbytis_comata.k141_672698                               8546  0 -     15069 C
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000036.1               26743271  0 +  26888534 C
e Piliocolobus_kirkii.k141_929665                            4788  0 +      7694 C
e Piliocolobus_gordonorum.k141_1270531                       5421  0 -     17985 C
e Piliocolobus_badius.k141_1987485                           4802  0 -      5908 C
e Nasalis_larvatus.k141_153429                              11264  0 +     48152 C
e Colobus_polykomos.k141_1406057                            19335  0 +     23629 C
e Colobus_guereza.LG08                                  147667351  0 + 156195979 C
e Colobus_angolensis.KN985967.1                          10889423  0 +  10971483 C
e Cephalopachus_bancanus.k141_702587                        12545  0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530  0 +    345090 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               17713  8 +    209709 A-T-G--CCA---CA
s Acinonyx_jubatus.LLWD01000356.1                         2039677  8 +   3721120 A-T-G--TCA---TT
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    117936  8 -    189883 A-T-G--CTA---TT
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10663638  8 +  23371972 A-T-G--TCA---CT
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7100167  8 -  16596857 A-T-G--TCA---CT
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   5586  8 -     60446 A-G-G--TCA---CG
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         6303  8 -     29318 A-G-G--TCA---CA
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         5241  8 +     38766 A-G-G--TCA---CA
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          6197  8 -     80423 A-G-G--TCA---CA
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              1180  8 +     19852 A-C-G--TCA---GA
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                3424  8 -     12443 A-C-G--TCA---GA
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                              723  8 +      5070 A-C-G--TCA---GA
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                  468  8 -      1641 A-C-A--TCA---GA
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          3207  8 -     24210 A-C-G--TCA---GA
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           29789  8 -     30219 A-C-G--TCA---GA
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_405616                              5625  8 +     16794 A-C-G--TCA---GA
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                             757  8 -      1470 A-C-G--TCA---GA
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             4902  8 -      9835 A-C-G--TCA---GA
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3525694  8 +   4113121 C-T-G--TCA---CT
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      392729  7 -    631301 --T-G--TTA---CT
i Anoura_caudifer.AnoCau_scaffold_422                   I 1 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             3125  8 +     55446 A-T-G--TCA---CT
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 66515  6 +     78111 ----G--TCA---CA
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            9461  8 +     22701 A-T-G--TCA---CA
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5753419  7 +   9889416 A-T-G---CA---CA
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                            10017  8 -    104377 A-T-G--TCA---CA
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                              10024  8 +     23246 A-T-G--TCA---CA
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     2558  8 +     11424 A-T-G--TCA---GT
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        6642  8 +      9265 A-T-G--TCA---CT
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                11154  7 -     29036 --C-A--TTA---CT
i Artibeus_jamaicensis.ArtJam_scaffold_41619            I 1 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9543310  8 +  39197703 A-C-G--TCA---CA
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             64584  8 +     85812 A-C-G--TCA---CA
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                15597  8 +     89302 A-C-G--TCA---CA
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             20098  8 -     58268 A-C-G--TCA---CA
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             68092  8 +    119057 A-C-G--TCA---CA
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              10061  8 -     25888 A-C-G--TCA---CA
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                11126  8 -     16375 A-T-G--TCA---CT
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               4742  8 +      6337 A-T-G--TCA---CT
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26384180  8 +  51448160 A-T-G--TCA---CT
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        9353  8 -     13118 A-T-G--TCA---CT
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   48156  8 -     72089 A-T-G--TCA---CT
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   302300  8 -   6870073 A-T-A--TCA---CT
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22956398  8 + 161108492 A-T-A--TCA---CT
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     418663  8 +    998990 A-T-A--TCA---CT
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22665052  8 + 158972876 A-T-A--TCA---CT
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               674816  1 +   1914593 A--------------
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               117964  8 -    171031 A-TGG---CA---CA
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 16984  8 +    125063 A-TGG---CA---CA
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                19031  8 -    216513 A-TGG---CA---CA
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       11574  8 -    134917 A-TGG---CA---CA
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3223310  8 -   8989139 A-T-G--TCA---CT
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           401011  8 -  15254737 A-T-G--TCA---CT
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2976748  8 +   6889770 A-T-G--TCA---CT
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11526515  8 +  39901454 A-C-G--TCA---TG
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   21489  8 +     87036 A-C-G--TCA---TG
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11273198  8 -  35597290 A-C-A--TCA---TG
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11095909  8 +  39895921 A-C-G--TCA---TG
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16462694  8 -  44759192 A-C-G--TCA---TG
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21333636  8 + 157394656 C-T-G--TCA---CT
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135711991  8 - 157403528 C-T-G--TCA---CT
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_529800                   380  8 -      2320 A-T-G--GCA---CT
i Capromys_pilorides.CapPil_scaffold_529800             C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               62147  7 +     67245 --C-A--TTA---TT
i Carollia_perspicillata.CarPer_scaffold_4436           I 1 C 0
s Castor_canadensis.CasCan_scaffold_417865                    352  8 -       402 A-T-G--TCA---TT
i Castor_canadensis.CasCan_scaffold_417865              C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   162827  7 -    276539 --C-A--TCA---CT
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15789848  8 -  24422027 A-T-G--GCA---TT
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15801787  8 -  24440124 A-T-G--GCA---TT
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       179959  8 +    436027 A-T-G--GCA---TT
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18895686  8 -  29618158 A-T-G--TCA---CA
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                12336  8 -     26817 A-T-G--TCA---CA
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                16580  8 +     25043 A-T-G--TCA---CA
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4367750  8 +   7569818 A-T-T--TCA---CT
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         7507  8 -      9338 A-T-T--TCA---CT
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6559527  8 +   6739814 A-C-G--TCA---CA
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      31004  8 +     60454 A-T-G--TCA---CA
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          6208  8 -     21101 A-C-G--TCA---CA
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         63518  8 -    107033 A-C-G--TCA---CA
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        6381  8 -     17608 A-G-G--TCA---CA
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          3546  8 +     45019 A-G-G--TCA---CA
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           3822  8 +     15177 A-G-G--TCA---CA
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          6428  8 +     16677 A-G-G--TCA---CA
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           28618  8 +     35983 A-G-G--TCA---CA
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11995149  8 +  12117833 A-G-G--TCA---CA
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46482125  8 +  46592721 A-G-G--TCA---CA
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                        242  8 -     27215 A-G-G--TCA---CA
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       6442  8 +     35577 A-G-G--TCA---CA
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        6236  8 -     25661 A-G-G--TCA---CA
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        6408  8 -     17744 A-G-G--TCA---CA
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        25777  8 +     37128 A-G-G--TCA---CA
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           4744  8 -      6963 C-T-A--AAA---CT
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           63351  6 -     68416 A-T-G--T-----CT
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                           12457  6 +     13308 A-T-G--T-----CT
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             9623  8 -     18223 A-T-G-T-CA---CA
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              1361  8 +    188999 A-T-G-T-CA---CA
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           45660  8 +     57117 A-T-G-T-CA---CA
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          50340  8 +     54541 A-T-G-T-CA---CA
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15964533  8 +  43084221 A-C-G--GCA---CT
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         75143  8 +    196370 G-TGG---CA---CA
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          19324  8 +     40510 G-TGG---CA---CA
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15143962  8 -  15256731 A-G-G--TCA---CA
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      38426  8 -     53260 A-G-G--TCA---CA
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101148985  8 + 101219884 A-G-G--TCA---CA
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                18854  6 -     21363 ----A--TCA---CT
i Choloepus_didactylus.ChoDid_scaffold_36182            I 1 C 0
s Choloepus_hoffmanni.KN194586.1                           764158  6 +    964067 ----A--TCA---CT
i Choloepus_hoffmanni.KN194586.1                        I 1 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_629495              2394  8 -      3120 A-T-A--ACA---CC
i Chrysochloris_asiatica.ChrAsi_scaffold_629495         C 0 C 0
s Condylura_cristata.JH655880.1                          60622341  7 +  78930452 --T-G--TCA---CT
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         2678  8 -      5782 A-T-G--TAA---CT
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    I 4 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 282826  3 -    399297 A-T-G----------
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 I 2
s Cricetulus_griseus.LT883672.1                          53035192  8 +  72327488 A-T-G--CTA---CT
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              2249  8 -     22648 A-T-G--TCT---CT
i Crocidura_indochinensis.CroInd_scaffold_27484         I 153 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            57663  8 -     70449 A-A-G--TCA---TT
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  214436  8 -    956709 A-C-A--TTA---CT
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 34500  8 -     67205 A-T-G--GCA---CT
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                21021  8 +     26546 A-T-G--GCA---CT
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             62160  8 -    236241 A-T-G--GCA---CT
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          185825  8 -   6883506 C-T-A--AAA---CT
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16849286  8 +  31942871 A-T-G--TCA---CT
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80040803  8 -  96802777 A-T-G--TCA---CT
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18701362  7 -  18957592 --C-G--TTA---CT
i Desmodus_rotundus.KZ672188.1                          I 1 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 326399  8 +    993696 A-T-T--TCA---CT
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   7038  8 +    151128 A-T-T--TCA---CT
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   159797  5 +    228994 -------GCA---CT
i Dinomys_branickii.DinBra_scaffold_1996                I 2 C 0
s Dipodomys_ordii.KN672545.1                              3660510  8 +   4240102 A-C-A--TCA---TA
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  2864  8 -     11986 A-C-A--TCA---TA
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                40744  8 -     73477 A-C-G--GGA---CT
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           23000061  8 -  44670279 A-T-A--ACA---GT
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1496372  8 +   1727528 A-T-G--TCA---CT
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7833117  8 +  15467074 T-T-A--GCA---CT
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        243990  8 -    369425 A-T-G--ATA---CT
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Enhydra_lutris.KZ291749.1                              85877631  8 +  99434291 A-C-A--TCA---CT
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4709123  5 +   6522550 -------tta---tt
i Eptesicus_fuscus.JH977687.1                           I 2 C 0
s Erinaceus_europaeus.JH835290.1                         11541465  8 +  16010500 A-T-G--ACA---CT
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48780995  8 -  48907691 A-G-G--TCA---CA
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          319023  8 +    330699 A-T-G--TCA---CT
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             65480  8 +     89355 A-T-G--TCA---CT
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              9439  8 +     13586 A-T-G--TCA---CT
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_1015201                              2701  8 -      4292 A-T-G--TCA---CT
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            15835  8 +     36558 A-T-G--TCA---CT
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            12160  8 +     60246 A-T-G--TCA---CT
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                15642  8 +    109717 A-T-G--TCA---CT
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 3628  8 -     19505 A-T-G--TCA---CT
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                20300  8 +     27497 A-T-G--TCA---CT
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           22756  8 +     26808 A-T-G--TCA---CT
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                37491  8 +     46535 A-T-G--TCA---CT
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              20229  8 -     29447 A-T-G--TCA---CT
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.AANG03133801.1                                  718  8 -       736 G-T-G--TCA---TT
i Felis_catus.AANG03133801.1                            C 0 C 0
s Felis_catus_fca126.CM031420.1                         129286072  8 - 158578461 G-T-G--TCA---TT
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 27171  8 +     52776 G-T-G--TCA---TT
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13896307  8 -  19261668 A-T-G--GCA---CT
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     215489  8 -    847004 A-T-G--TCA---CT
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           17850  8 -     43889 A-T-G--TCA---CT
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          14994  8 +     27357 A-T-G--TCA---CT
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               159739  8 +    324696 A-C-G--TCA---CT
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    186170  8 -    189561 A-T-G--TCA---CT
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           16634  8 -     18683 A-T-G--TCA---CT
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               9410  8 -     14630 A-T-G--TCA---CA
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119656510  8 - 195582420 A-T-G--TCA---CA
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   79948  8 +    118900 A-T-G--TCA---CT
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         6222  8 +     10286 A-T-G--TCA---CT
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             4700  8 -     11661 A-T-G--TCA---CT
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                            10027  8 +     56096 A-T-G--TCA---CT
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        33276  8 -     42470 A-T-G--TCA---CT
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        49899  8 -     54384 A-T-G--TCA---CT
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              22801  8 +     53719 A-T-G--TTA---TT
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                33041  8 -     91191 C-T-G--TCA---CT
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2560798  8 +  31725842 A-T-G--ACA---CT
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               63025  7 +     73687 A-T-A---TA---TT
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              150805  8 +    277961 A-T-G--TCA---CT
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001052.1                      277294  8 -    479840 A-T-G--TCA---CT
i Hipposideros_armiger.JXIK01001052.1                   C 0 I 26
s Hipposideros_galeritus.HipGal_scaffold_7653                5766  8 +     86108 A-T-G--TCA---CT
i Hipposideros_galeritus.HipGal_scaffold_7653           C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 23273  8 -     67322 A-C-G--TCA---CT
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           21412  8 -    119109 A-T-A--GTG---CT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     9705  8 +     22540 T-T-G--TTA---GT
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7130542  8 +  13083262 A-T-G--CCA---CC
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   1746  8 +      3484 A-T-G--TCA---CT
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              13015  8 +     17520 A-T-G--TCA---CT
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               27634  8 +     37189 A-T-G--TCA---CT
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          54179  8 -    147782 A-T-G--TCA---CA
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    5735  5 +     26176 -------TTA---TT
i Lasiurus_borealis.LasBor_scaffold_59542               I 2 C 0
s Lemur_catta.scaffold_1                                258411574  8 - 285822530 A-T-G--TCA---CT
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        28888  8 +     39228 A-T-G--TCA---CA
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            58252  8 +     63517 A-T-G--TCA---CA
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        36632  8 -     38897 A-T-G--TCA---CA
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      2678  8 -     13103 A-T-G--TCA---CA
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3091607  8 -   3498232 A-T-G--TTA---CT
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    21038 10 +     22452 A-T-GAATAA---TT
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            139949  8 +   3060487 A-T-G--TCA---CT
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19252616  8 +  19376315 A-T-G--TCA---CA
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           15439  8 +     84689 A-T-G--TCA---CT
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3783178  8 +   6799190 A-T-G--TCA---CT
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20598956  7 -  62548349 A-T-A---CA---CT
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11095365  8 +  39895028 A-C-G--TCA---TG
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             24367  8 +     74745 A-C-G--TCA---CA
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12710828  8 +  12821369 A-C-G--TCA---CA
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                3401  8 -     26467 A-C-G--TCA---CA
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           51272  8 +     63263 A-C-G--TCA---CA
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 3382  8 -     26361 A-C-G--TCA---CA
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 6572  8 -      7381 A-C-G--TCA---CA
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  49801  8 -     79256 A-C-G--TCA---CA
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196039899  8 + 196197964 A-C-G--TCA---CA
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11450069  8 +  11645122 A-C-G--TCA---CA
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   8755  8 -     46448 A-C-G--TCA---CA
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                6418  8 -     13212 A-C-G--TCA---CA
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 20098  8 -     55006 A-C-G--TCA---CA
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43845213  8 +  43892939 A-C-G--TCA---CA
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               21382  8 -     24607 A-C-G--TCA---CA
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               8752  8 -     27140 A-C-G--TCA---CA
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43441788  8 -  43563597 A-T-G--TCA---CA
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4454592  8 -   4543643 A-T-G--TCA---CA
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            152339  6 +    252755 A-T-G--TCA-----
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             39929  6 +     58827 A-T-G--TCA-----
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36878414  8 +  64221397 A-T-G--CCA---CC
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       65760  8 -    234502 G-T-G--TCA---CA
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             6523  8 -     87323 A-C-G--TCA---CT
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 1438  8 +    115071 A-T-G--CTT---CT
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1051711  8 -  26018355 A-T-G--CTA---CT
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    2606  8 -     12939 A-T-G--TTA---CT
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16514606  8 +  47401472 A-T-G--TCA---CT
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  41621  8 -     48017 A-T-C--AAA---GT
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               25109  7 -     32043 --T-G--TTA---CT
i Micronycteris_hirsuta.MicHir_scaffold_37978           I 1 C 0
s Microtus_ochrogaster.CM001673.1                        22824788  8 -  98408828 A-T-G--ATA---CT
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8213170  8 +  10048721 a-t-g--ttg---tt
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            37659  8 +     45743 A-T-G--TTG---TT
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         6334  8 +     29742 A-G-G--TCA---CA
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        17103  8 -    104932 A-T-G--TTA---CT
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     5289  8 -     12809 A-T-G--TCA---CT
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 150396  8 +    154973 A-T-G--TCA---CT
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                163648  8 +    265003 A-T-G--TTA---TT
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  6390  8 -     19904 A-T-G--TCA---CT
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  150476  8 -    168139 A-T-G--TTA---TT
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          24585  5 -    100666 -------TAA---TT
i Murina_feae.MurFea_scaffold_2254                      I 2 C 0
s Mus_caroli.LT608236.1                                  70772010 11 +  92629107 A-T-G--CTAAGACT
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75494064 11 +  98207768 A-T-G--CTAAGACT
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67560816 11 +  89017189 A-T-G--CTACAACT
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74336790 11 +  97876770 A-T-G--CTAAGACT
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             15039  8 +     98495 A-T-G--TCA---CT
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4428348  8 -  28371801 A-T-G--tca---ct
i Mustela_putorius.JH417978.1                           C 0 I 492
s Myocastor_coypus.MyoCoy_scaffold_3653                     94005  6 -    117718 ----G--GAA---CT
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 1 C 0
s Myotis_brandtii.KE161952.1                               971457  5 +   8389877 -------tta---tt
i Myotis_brandtii.KE161952.1                            I 2 C 0
s Myotis_davidii.KB114863.1                               5022877  5 +   6462685 -------tta---tt
i Myotis_davidii.KB114863.1                             I 2 C 0
s Myotis_lucifugus.GL429887.1                             3468961  5 -   3747815 -------tta---tt
i Myotis_lucifugus.GL429887.1                           I 2 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        14202  5 +     66751 -------TTA---TT
i Myotis_myotis.MyoMyo_scaffold_6123                    I 2 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             7802  6 -      8794 ----A--TCA---CT
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        I 1 C 0
s Nannospalax_galili.KL201303.1                            120537  8 +    362372 A-T-G--CTA---TT
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4490501  8 -  14209539 A-T-G--TTA---CT
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3954987  8 -   4490290 A-T-G--TCA---CT
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  50708  9 +     94413 ATT-G--TTA---TT
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_762468                             402  8 -      2755 A-T-G--TCA---CA
i Nomascus_annamensis.k141_762468                       C 0 C 0
s Nomascus_concolor.k141_70405                               1022  8 +      1153 A-T-G--TCA---CA
i Nomascus_concolor.k141_70405                          C 0 C 0
s Nomascus_gabriellae.k141_1400361                            953  8 -      2203 A-T-G--TCA---CA
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_453                             6265  8 +     12787 A-T-G--TCA---CA
i Nomascus_siki_b.tarseq_453                        C 0 C 0
s Nomascus_siki_a.k141_421408                                   867  8 +     16235 A-T-G--TCA---CA
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                38230  8 +   3668941 A-C-G--TCA---Tt
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65572115  8 -  95554990 A-A-G--TCA---CT
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_771591                            15525  8 +     16181 A-A-G--TCA---CT
i Nycticebus_coucang.k141_771591                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65680303  8 +  89412551 A-A-G--TCA---CT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            5000085  4 -  23139505 --------AA---GT
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3689491  8 +  10294119 G-T-G--GCA---CT
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             685204  8 -   3126709 A-T-G--TTA---CT
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1083820  8 +   1425656 A-T-G--TCA---CT
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         41904  8 +     78940 A-T-G--TCA---CT
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  130584  8 +    145789 A-T-G--ATA---CT
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  43279  8 +     62360 A-T-G--CTA---CT
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7228661  8 -   7562323 A-T-G--TCA---CT
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              64396  8 -     66828 A-T-A--AAA---CT
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141884055 10 + 163896628 A-T-GAATAA---TT
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      315368  8 -    505867 A-C-G--TCA---TG
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        5351  8 -     53940 A-T-G--TCA---CT
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18013320  8 -  38779656 A-T-G--TCA---CT
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134082827  8 - 275406953 C-T-G--TCA---CT
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      84061  8 +    140051 C-T-G--TCA---CT
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127578689  8 - 205426864 A-T-G--TCA---CA
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120155849  8 - 196562556 A-T-G--TCA---CA
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  40091  8 +    295523 A-T-G--TCA---TT
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3643906  8 +  18214204 A-T-G--TCA---TT
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5033554  8 -   6340057 A-T-G--TCA---TT
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1071697  8 -   1292953 C-T-G--TCA---CT
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188160577  8 - 188283584 A-T-G--TCA---CA
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              3667  8 +     25005 A-T-G--TCA---CA
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47517949  8 +  47705337 A-T-G--TCA---CA
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 71940  8 -    104429 A-T-G--TCA---CA
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   10472  8 +     14967 A-T-G--TCA---CA
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 6337  8 -      7628 A-T-G--TCA---CA
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    121578  8 -    135482 A-C-A--TCA---TT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          11015  8 -     23713 G-T-G--TCA---CT
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           12166  8 +     61070 G-T-G--TCA---CT
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       2431  8 +     49596 A-C-A--TCA---TT
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4955645  8 -   8017169 A-T-G--CTA---CT
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    17485  7 -     36578 A-T-G--GCA---T-
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              3128  8 +      8220 A-T-G--TCA---CT
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            99748  5 +    112873 -------TTA---TT
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        I 2 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           9599  8 +     21690 A-T-G--TCA---CT
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       26272  8 +     44506 A-T-G-T-CA---CA
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        26485  8 +     67491 A-T-G-T-CA---CA
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      16724  8 -     98129 A-T-G-T-CA---CA
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     26325  8 +    147771 A-T-G-T-CA---CA
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         2960  8 -     43940 A-T-G-T-CA---CA
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          7043  8 -     55515 A-T-G-T-CA---CA
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         26397  8 +    152463 A-T-G-T-CA---CA
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       4205  8 -    119457 A-T-G-T-CA---CA
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         16120  8 +    134592 A-T-G-T-CA---CA
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          26707  8 -     75465 A-T-G-T-CA---CA
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              191320  8 -    373494 A-C-G--TCA---CA
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19811967  8 +  19899266 A-T-G--TCA---CA
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                4130  7 -      9567 A-T-A---TA---TT
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6852948  8 +  12164890 A-T-G--TCA---CT
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     21757  8 -     30946 N-N-N--NNN---NN
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         8034  8 +     11805 A-T-G--TCA---CT
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           47368  8 +     52369 A-T-G--TCA---CT
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         39755  8 -     44753 A-T-G--TCA---CT
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            21678  8 +     27322 A-T-G--TCA---CT
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       21327  8 -     53241 A-T-G--TCA---CT
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         43590  8 -     48185 A-T-G--TCA---CT
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           38433  8 +     77221 A-T-G--CTT---CT
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            6291  8 -     27784 a-t-g--tta---tt
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        250491  8 -    344369 A-T-G--TCA---CT
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Puma_concolor.QAVW01000427.1                          131540203  8 - 161321710 A-T-G--TCA---TT
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                20685  8 +     68503 A-T-G--TCA---CT
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13917849 11 +  90463843 A-T-G--CTGCTGCT
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1792804  7 +   2252614 --A-G--TCA---TT
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                      1096  8 -      4338 A-T-G--TCA---CT
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15676728  8 -  43202129 A-T-G--TCA---TA
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        8641  8 +     34089 A-T-G--TCA---TA
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              8581  8 -     60842 A-T-G--TCA---TA
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              8675  8 +     67014 A-T-G--TCA---TA
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              8652  8 +     60816 A-T-G--TCA---TA
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 8589  8 -     76454 A-T-G--TCA---TA
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17345374  8 -  30362882 A-T-G--TCA---CA
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         24695  8 -     62485 A-T-G--TCA---CA
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   39817  8 -    114521 G-T-G--TCA---CT
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  105646  8 -    120886 A-T-G--CTA---TT
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            23743  8 +    739146 A-T-G--TAA---CT
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17773961  8 -  27805282 A-T-G--TCT---CC
i Sorex_araneus.JH798170.1                              I 104 C 0
s Spermophilus_dauricus.KZ294190.1                        2244246  8 +   2842873 A-T-G--CCA---CC
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             239002  8 -    276980 A-t-t--tca---ct
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            33393  8 +     62062 A-T-A--TTA---TT
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189275185  8 + 218635234 A-T-G--TCA---CT
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        18990  8 -  13920577 A-T-G--TCA---CA
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                2522  8 +     20549 A-T-G--TTA---TT
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               17475  6 +     45698 ----A--TCA---CT
i Tamandua_tetradactyla.TamTet_scaffold_26877           I 1 C 0
s Tapirus_indicus.TapInd_scaffold_176                      810983  8 +   1148477 A-T-G--TCA---CT
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  61625  8 +     99546 A-T-G--TCA---CT
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194012110  8 - 194193292 A-T-G--TCA---CA
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                   584  8 -      3104 C-T-A--ACA---CT
i Tolypeutes_matacus.TolMat_scaffold_475685             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  138286  7 -    259118 --C-A--TTA---CT
i Tonatia_saurophila.TonSau_scaffold_3334               I 1 C 0
s Trichechus_manatus.JH594618.1                          16090031  7 +  31416278 A-T-A---CT---CT
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2797954  8 -   3938065 G-T-G--TCA---CT
i Tupaia_chinensis.KB320831.1                           I 2433 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    9889  8 +     13056 G-T-G--TCA---CT
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69317390  8 -  96451834 A-T-G--TCA---CT
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                     273  8 +    136657 A-T-G--TCA---CT
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 C 0
s Ursus_maritimus.KK498671.1                              6520906  8 +  28682327 A-T-G--TCA---CT
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  9591  8 -     20643 A-T-G--TCA---CT
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             29126  8 -     33872 A-T-G--TCA---CT
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1528418  8 -   2331223 A-T-G--TCA---CT
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                144595  8 -    281493 A-C-G--TCA---TG
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       131742  8 -    134049 A-T-G--TCA---CT
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        220062  8 -    227762 A-T-G--TTA---CT
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            2138  8 -     13665 A-T-G--TCA---CT
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Tragulus_javanicus.TraJav_scaffold_14717                   9488 743 +     90398 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Equus_przewalskii.ATBW01073585.1                          16581  0 +     92910 C
e Equus_caballus.CM000402.2                              13355091  0 +  41866177 C
e Equus_asinus.JREZ01000062.1                             5856591  0 -   7175178 C
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Zapus_hudsonius.ZapHud_scaffold_256618                      408  0 -      2259 C
e Jaculus_jaculus.JH725517.1                              8577673  0 +  11848649 C
e Hylobates_pileatus_a.tarseq_592                             37493  0 -     60944 C
e Hylobates_pileatus_b.ContigUN                                 14628631  0 -  25970782 C
e Allactaga_bullata.AllBul_scaffold_141108                    666  0 -      7259 C
e Hylobates_muelleri.k141_1139146                            1183  0 +      4161 C
e Hylobates_klossii.k141_468230                              3284  0 +      5464 C
e Hylobates_agilis.k141_1633646                              1767  0 -      2102 C
e Hylobates_abbotti.k141_1816750                             1797  0 +      3202 C
e Trachypithecus_pileatus.k141_1022309                       5226  0 +     13828 C
e Trachypithecus_phayrei.ctg3                            44662914  0 -  44834318 C
e Trachypithecus_obscurus.k141_1115109                       8130  0 -     28054 C
e Trachypithecus_melamera.k141_699241                        2986  0 -     24393 C
e Trachypithecus_leucocephalus.k141_381681                   3005  0 +     12481 C
e Trachypithecus_laotum.k141_760702                          4719  0 +     14371 C
e Trachypithecus_hatinhensis.k141_504423                     6067  0 -     15592 C
e Trachypithecus_germaini.k141_868450                        3883  0 -     11566 C
e Trachypithecus_geei.k141_670367                           46082  0 -     54611 C
e Trachypithecus_francoisi.k141_768164                       4689  0 -     14244 C
e Trachypithecus_cristatus.k141_1011511                      5261  0 -     12939 C
e Trachypithecus_crepusculus.k141_1588528                   23360  0 -     32910 C
e Trachypithecus_auratus.k141_738098                        29800  0 +     38948 C
e Tarsius_wallacei.k141_48636                               64696  0 +     65473 C
e Tarsius_lariang.k141_609102                               31387  0 +     42269 C
e Semnopithecus_vetulus.k141_1143185                        16479  0 +     30600 C
e Semnopithecus_schistaceus.k141_387461                     33457  0 +     42640 C
e Semnopithecus_priam.k141_410937                           40312  0 +     46263 C
e Semnopithecus_johnii.k141_785014                         121532  0 +    130994 C
e Semnopithecus_hypoleucos.k141_761524                      11528  0 +     20762 C
e Semnopithecus_entellus.k141_1572367                        6153  0 +     15331 C
e Rhinopithecus_strykeri.ctg4                            44859307  0 -  45163003 C
e Rhinopithecus_bieti.k119_554384                            2917  0 -     17045 C
e Pygathrix_nigripes_a.k141_101123                             8537  0 +     18040 C
e Pygathrix_nigripes_b.ctg79                                 6809148  0 +   6970761 C
e Pygathrix_cinerea.k141_374971                             32651  0 +     56732 C
e Presbytis_mitrata.k141_860013                              8661  0 +     14865 C
e Presbytis_comata.k141_672698                               8546  0 -     15069 C
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000036.1               26743271  0 +  26888534 C
e Piliocolobus_kirkii.k141_929665                            4788  0 +      7694 C
e Piliocolobus_gordonorum.k141_1270531                       5421  0 -     17985 C
e Piliocolobus_badius.k141_1987485                           4802  0 -      5908 C
e Nasalis_larvatus.k141_153429                              11264  0 +     48152 C
e Colobus_polykomos.k141_1406057                            19335  0 +     23629 C
e Colobus_guereza.LG08                                  147667351  0 + 156195979 C
e Colobus_angolensis.KN985967.1                          10889423  0 +  10971483 C
e Cephalopachus_bancanus.k141_702587                        12545  0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530  0 +    345090 C
e Hoolock_leuconedys.ctg315                                   350415 278 +    431944 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               17721 6 +    209709 AC---CTTT
s Acinonyx_jubatus.LLWD01000356.1                         2039685 6 +   3721120 AC---TTTT
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    117944 6 -    189883 AC---TTAA
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10663646 6 +  23371972 AC---TTTG
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7100175 6 -  16596857 AC---TTTT
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   5594 6 -     60446 AC---CTTT
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         6311 6 -     29318 AC---CTTT
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         5249 6 +     38766 AC---CTTT
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          6205 6 -     80423 AC---CTTT
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              1188 6 +     19852 AT---CTTT
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                3432 6 -     12443 AT---CTTT
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                              731 6 +      5070 AT---CTTT
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                  476 6 -      1641 AT---CTTT
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          3215 6 -     24210 AT---CTTT
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           29797 6 -     30219 AT---CTTT
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_405616                              5633 6 +     16794 AT---CTTT
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                             765 6 -      1470 AT---CTTT
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             4910 6 -      9835 AT---CTTT
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3525702 6 +   4113121 AC---TTTG
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      392736 6 -    631301 AC---TTTT
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             3133 6 +     55446 AC---TTTG
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 66521 6 +     78111 AC---CTTT
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            9469 6 +     22701 AC---CTTT
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5753426 6 +   9889416 AC---CTTT
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                            10025 6 -    104377 AC---CTTT
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                              10032 6 +     23246 AC---CTTT
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     2566 6 +     11424 AC---TTAT
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        6650 6 +      9265 AT---TTGA
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                11161 6 -     29036 AC---TTTT
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9543318 6 +  39197703 AT---CTTT
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             64592 6 +     85812 AT---CTTT
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                15605 6 +     89302 AT---CTTT
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             20106 6 -     58268 AT---CTTT
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             68100 6 +    119057 AT---CTTT
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              10069 6 -     25888 AT---CTTT
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                11134 6 -     16375 AC---TTGT
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               4750 6 +      6337 AC---TTGT
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26384188 6 +  51448160 AC---TTTT
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        9361 6 -     13118 AC---TTTT
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   48164 6 -     72089 AC---TTTG
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   302308 6 -   6870073 AC---TTTG
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22956406 6 + 161108492 AC---TTTG
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     418671 6 +    998990 AC---TTTG
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22665060 6 + 158972876 AC---TTTG
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               674817 3 +   1914593 ------TTG
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               117972 6 -    171031 AC---CTTT
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 16992 6 +    125063 AC---CTTT
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                19039 6 -    216513 AC---CTTT
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       11582 6 -    134917 AC---CTTT
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3223318 6 -   8989139 AC---TTTA
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           401019 6 -  15254737 AC---TTTA
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2976756 6 +   6889770 AC---TTTA
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11526523 6 +  39901454 AC---TTTT
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   21497 6 +     87036 AC---TTTT
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11273206 6 -  35597290 AC---TTTT
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11095917 6 +  39895921 AC---TTTT
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16462702 6 -  44759192 AC---TTTT
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21333644 6 + 157394656 AC---TTTG
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135711999 6 - 157403528 AC---TTTG
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_529800                   388 6 -      2320 AT---CTAG
i Capromys_pilorides.CapPil_scaffold_529800             C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               62154 6 +     67245 AC---TTTT
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_417865                    360 6 -       402 CC---TTAC
i Castor_canadensis.CasCan_scaffold_417865              C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   162834 6 -    276539 AC---ATTT
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15789856 6 -  24422027 AC---TCAT
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15801795 6 -  24440124 AC---TCAT
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       179967 6 +    436027 AC---TCAT
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18895694 6 -  29618158 AC---CTTT
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                12344 6 -     26817 AC---CTTT
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                16588 6 +     25043 AC---CTTT
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4367758 6 +   7569818 AC---TTTT
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         7515 6 -      9338 AC---TTTT
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6559535 6 +   6739814 AC---CTTT
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      31012 6 +     60454 AC---CTTT
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          6216 6 -     21101 AC---CTTT
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         63526 6 -    107033 AC---CTTT
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        6389 6 -     17608 AC---CTTT
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          3554 6 +     45019 AC---CTTT
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           3830 6 +     15177 AC---CTTT
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          6436 6 +     16677 AC---CTTC
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           28626 6 +     35983 AC---CTTT
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11995157 6 +  12117833 AC---CTTT
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46482133 6 +  46592721 AC---CTTT
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                        250 6 -     27215 AC---CTTT
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       6450 6 +     35577 AC---CTTT
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        6244 6 -     25661 AC---CTTT
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        6416 6 -     17744 AC---CTTT
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        25785 6 +     37128 AC---CTTT
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           4752 6 -      6963 AC---TTTT
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 I 6
s Cheirogaleus_major.k141_1157592                           63357 4 -     68416 AC---TT--
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                           12463 6 +     13308 AC---TTAT
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             9631 6 -     18223 AC---CTTT
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              1369 6 +    188999 AC---CTTT
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           45668 6 +     57117 AC---CTTT
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          50348 6 +     54541 AC---CTTT
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15964541 6 +  43084221 AC---TCAG
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         75151 6 +    196370 AC---CTTT
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          19332 6 +     40510 AC---CTTT
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15143970 6 -  15256731 AC---CTTT
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      38434 6 -     53260 AC---CTTT
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101148993 6 + 101219884 AC---CTTT
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                18860 6 -     21363 AC---TTTT
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           764164 6 +    964067 AC---TTTT
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_629495              2402 6 -      3120 AC---TAAT
i Chrysochloris_asiatica.ChrAsi_scaffold_629495         C 0 C 0
s Condylura_cristata.JH655880.1                          60622348 6 +  78930452 AC---TTCT
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         2686 6 -      5782 AC---TTCT
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 282831 6 -    399297 AC---TTAA
i Cricetomys_gambianus.CriGam_scaffold_949              I 2 C 0
s Cricetulus_griseus.LT883672.1                          53035200 6 +  72327488 AC---TTAA
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              2257 5 -     22648 AC----ATT
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            57671 6 -     70449 AC---TTTT
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  214444 6 -    956709 AT---TCAT
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 34508 6 -     67205 CT---CCAG
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                21029 6 +     26546 AC---TCAT
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             62168 6 -    236241 AC---TCGT
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          185833 6 -   6883506 AC---TTTT
i Dasypus_novemcinctus.JH568778.1                       C 0 I 6
s Daubentonia_madagascariensis.ctg11                     16849294 6 +  31942871 AC---TTGT
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80040811 6 -  96802777 AC---TTTT
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18701369 6 -  18957592 AC---TTTT
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 326407 6 +    993696 AC---TTTT
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   7046 6 +    151128 AC---TTTT
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   159802 6 +    228994 CC---TCAG
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3660518 6 +   4240102 AC---TTAT
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  2872 6 -     11986 AC---TTAT
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                40752 6 -     73477 AC---TCAT
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           23000069 6 -  44670279 AC---TTAT
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1496380 6 +   1727528 AC---TTGG
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7833125 6 +  15467074 AT---TTGT
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        243998 6 -    369425 AC---TTAA
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Enhydra_lutris.KZ291749.1                              85877639 6 +  99434291 AC---TTTT
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4709128 6 +   6522550 ac---tttt
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11541473 6 +  16010500 GA---CTTT
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48781003 6 -  48907691 AC---CTTT
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          319031 6 +    330699 AC---TTTT
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             65488 6 +     89355 AC---TTTT
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              9447 6 +     13586 AC---TTGT
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_1015201                              2709 6 -      4292 AC---TTGT
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            15843 6 +     36558 AC---TTGT
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            12168 6 +     60246 AC---TTGT
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                15650 6 +    109717 AC---TTGT
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 3636 6 -     19505 AC---TTGT
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                20308 6 +     27497 AC---TTGT
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           22764 6 +     26808 AC---TTGT
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                37499 6 +     46535 AC---TTGT
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              20237 6 -     29447 AC---TTGT
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.AANG03133801.1                                  726 6 -       736 AC---TTTC
i Felis_catus.AANG03133801.1                            C 0 n 0
s Felis_catus_fca126.CM031420.1                         129286080 6 - 158578461 AC---TTTC
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 27179 6 +     52776 AC---TTTC
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13896315 6 -  19261668 ACTCAT---
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     215497 6 -    847004 AT---CAGA
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           17858 6 -     43889 AT---CAGA
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          15002 6 +     27357 AC---CTGA
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               159747 6 +    324696 AC---TTAT
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    186178 6 -    189561 AC---TTTG
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           16642 6 -     18683 AT---TTAT
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               9418 6 -     14630 AC---CTTT
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119656518 6 - 195582420 AC---CTTT
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   79956 6 +    118900 AC---TTAT
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         6230 6 +     10286 AC---TTGT
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             4708 6 -     11661 AC---TTGT
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                            10035 6 +     56096 AC---TTGT
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        33284 6 -     42470 AC---TTGT
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        49907 6 -     54384 AC---TTGT
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              22809 6 +     53719 GC---TTTT
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                33049 6 -     91191 AC---TTTG
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2560806 6 +  31725842 ATTCAT---
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               63032 6 +     73687 AC---TTGG
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              150813 6 +    277961 AC---TTTT
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      283211 6 -    477199 AC---TTTT
i Hipposideros_armiger.JXIK01001085.1                   I 78 C 0
s Hipposideros_galeritus.HipGal_scaffold_7653                5774 6 +     86108 AC---TTTT
i Hipposideros_galeritus.HipGal_scaffold_7653           C 0 I 20
s Hyaena_hyaena.HyaHya_flattened_line_20729                 23281 6 -     67322 AC---TTTT
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           21420 6 -    119109 GC---TCAT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     9713 3 +     22540 AC------T
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7130550 6 +  13083262 AC---TTAG
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   1754 6 +      3484 AC---TTAT
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              13023 6 +     17520 AC---TTTT
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               27642 6 +     37189 AC---TTGT
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          54187 6 -    147782 AT---CTTT
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    5740 6 +     26176 AC---TTTT
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258411582 6 - 285822530 AC---TTGT
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        28896 6 +     39228 AC---TTAT
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            58260 6 +     63517 AC---TTAT
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        36640 6 -     38897 AC---TTAT
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      2686 6 -     13103 AC---TTAT
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3091615 6 -   3498232 AC---TTTT
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    21048 6 +     22452 AC---TTAT
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            139957 6 +   3060487 AC---TTTT
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19252624 6 +  19376315 AC---CTTT
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           15447 6 +     84689 AT---TTGA
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3783186 6 +   6799190 AT---TTGA
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20598963 6 -  62548349 AC---TTGT
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11095373 6 +  39895028 AC---TTTT
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             24375 6 +     74745 AC---CTTT
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12710836 6 +  12821369 AC---CTTT
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                3409 6 -     26467 AC---CTTT
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           51280 6 +     63263 AC---CTTT
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 3390 6 -     26361 AC---CTTT
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 6580 6 -      7381 AC---CTTT
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  49809 6 -     79256 AC---CTTT
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196039907 6 + 196197964 AC---CTTT
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11450077 6 +  11645122 AC---CTTT
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   8763 6 -     46448 AC---CTTT
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                6426 6 -     13212 AC---CTTT
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 20106 6 -     55006 AC---CTTT
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43845221 6 +  43892939 AC---CTTT
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               21390 6 -     24607 AC---CTTT
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               8760 6 -     27140 AC---CTTT
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43441796 6 -  43563597 AC---CTTT
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4454600 6 -   4543643 AC---CTTT
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36878422 6 +  64221397 AC---TTAG
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       65768 6 -    234502 AC---GTTT
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             6531 6 -     87323 AC---TTTT
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 1446 6 +    115071 AC---TTAA
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1051719 6 -  26018355 AC---TTAA
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    2614 6 -     12939 AC---TTCT
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16514614 6 +  47401472 AC---TTAT
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  41629 6 -     48017 GC---TTAC
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               25116 6 -     32043 AC---TTTT
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22824796 6 -  98408828 AC---TTAA
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8213178 6 +  10048721 at---tttt
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            37667 6 +     45743 AT---TTTT
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         6342 6 +     29742 AC---CTTT
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        17111 6 -    104932 AC---TTTT
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     5297 6 -     12809 AC---TTAT
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 150404 6 +    154973 AC---TTTT
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                163656 6 +    265003 AC---TTTT
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  6398 6 -     19904 AC---TTTG
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  150484 6 -    168139 AC---TTTT
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          24590 6 -    100666 AC---TTTT
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70772021 6 +  92629107 AC---TTAA
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75494075 6 +  98207768 AC---TTAA
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67560827 6 +  89017189 AC---TTAA
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74336801 6 +  97876770 AC---TTAA
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             15047 6 +     98495 AC---TTAG
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4428848 6 -  28371801 AC---TTTT
i Mustela_putorius.JH417978.1                           I 492 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     94011 6 -    117718 AT---CCAG
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               971462 6 +   8389877 ac---tttt
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5022882 6 +   6462685 at---tttt
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3468966 6 -   3747815 ac---tttt
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        14207 6 +     66751 AC---TTTT
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             7808 6 -      8794 AC---TTTA
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            120545 6 +    362372 AC---TTAT
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4490509 6 -  14209539 AC---TTTT
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3954995 6 -   4490290 AC---TTTT
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  50717 6 +     94413 AC---TTTG
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_762468                             410 6 -      2755 AC---CTTT
i Nomascus_annamensis.k141_762468                       C 0 C 0
s Nomascus_concolor.k141_70405                               1030 6 +      1153 AC---CTTT
i Nomascus_concolor.k141_70405                          C 0 C 0
s Nomascus_gabriellae.k141_1400361                            961 6 -      2203 AC---CTTT
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_453                             6273 6 +     12787 AC---CTTT
i Nomascus_siki_b.tarseq_453                        C 0 C 0
s Nomascus_siki_a.k141_421408                                   875 6 +     16235 AC---CTTT
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                38238 6 +   3668941 ac---tttt
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65572123 6 -  95554990 AT---TTGA
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_771591                            15533 6 +     16181 AT---TTGA
i Nycticebus_coucang.k141_771591                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65680311 6 +  89412551 AT---TTGA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            5000089 6 -  23139505 AC---TTAT
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3689499 6 +  10294119 AT---CCAG
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             685212 6 -   3126709 AC---TTTT
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1083828 6 +   1425656 AC---TTGG
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         41912 6 +     78940 AC---TTTG
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  130592 6 +    145789 AC---TTAA
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  43287 6 +     62360 AT---TTAC
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7228669 6 -   7562323 AC---TTTT
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              64404 6 -     66828 AC---TTGT
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141884065 6 + 163896628 AC---TTAT
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      315376 6 -    505867 AC---TTTT
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        5359 6 -     53940 AT---CTGA
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18013328 6 -  38779656 AT---CTGA
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134082835 6 - 275406953 AC---TTTG
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      84069 6 +    140051 AC---TTTG
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127578697 6 - 205426864 AC---CTTT
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120155857 6 - 196562556 AC---CTTT
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  40099 6 +    295523 AC---TTTT
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3643914 6 +  18214204 AC---TTTT
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5033562 6 -   6340057 AC---TTTT
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1071705 6 -   1292953 AC---TTTG
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188160585 6 - 188283584 AC---CTTT
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              3675 6 +     25005 AC---CTTT
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47517957 6 +  47705337 AC---CTTT
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 71948 6 -    104429 AC---CTTT
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   10480 6 +     14967 AC---CTTT
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 6345 6 -      7628 AC---CTTT
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    121586 6 -    135482 AC---TTTT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          11023 6 -     23713 AT---TTGA
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           12174 6 +     61070 AT---TTGA
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       2439 6 +     49596 AC---TTCT
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4955653 6 -   8017169 AC---TTAC
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              3136 6 +      8220 AC---TTTT
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            99753 6 +    112873 AC---TTTT
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           9607 6 +     21690 AC---TTTT
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       26280 6 +     44506 AC---CTTT
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        26493 6 +     67491 AC---CTTT
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      16732 6 -     98129 AC---CTTT
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     26333 6 +    147771 AC---CTTT
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         2968 6 -     43940 AC---CTTT
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          7051 6 -     55515 AC---CTTT
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         26405 6 +    152463 AC---CTTT
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       4213 6 -    119457 AC---CTTT
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         16128 6 +    134592 AC---CTTT
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          26715 6 -     75465 AC---CTTT
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              191328 6 -    373494 AC---CTTT
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19811975 6 +  19899266 AC---CTTT
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                4137 6 -      9567 AC---TTGG
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6852956 6 +  12164890 AC---TTGT
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     21765 6 -     30946 NN---NNNN
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         8042 6 +     11805 AC---TTGT
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           47376 6 +     52369 AC---TTGT
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         39763 6 -     44753 AC---TTGT
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            21686 6 +     27322 AC---TTGT
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       21335 6 -     53241 AC---TTGT
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         43598 6 -     48185 AC---TTGT
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           38441 6 +     77221 AC---TTAA
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            6299 6 -     27784 ac---tttt
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        250499 6 -    344369 AC---TTTT
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Puma_concolor.QAVW01000427.1                          131540211 6 - 161321710 AC---TTTT
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                20693 6 +     68503 AC---TTGG
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13917860 6 +  90463843 AC---TTAA
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1792811 6 +   2252614 AC---TTTT
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                      1104 6 -      4338 AC---TTTG
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15676736 6 -  43202129 AC---CTTT
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        8649 6 +     34089 AC---CTTT
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              8589 6 -     60842 AC---CTTT
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              8683 6 +     67014 AC---CTTT
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              8660 6 +     60816 AC---CTTT
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 8597 6 -     76454 AC---CTTT
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17345382 6 -  30362882 AC---CTTT
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         24703 6 -     62485 AC---CTTT
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   39825 6 -    114521 AC---TTCT
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  105654 6 -    120886 AC---TCAT
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            23751 6 +    739146 AC---TATT
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17773969 5 -  27805282 AC----TTT
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2244254 6 +   2842873 AC---TTAG
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             239010 6 -    276980 ac---tttt
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 I 271
s Suricata_suricatta.SurSur_flattened_line_20339            33401 6 +     62062 AC---TTTT
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189275193 6 + 218635234 AC---TTTT
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        18998 6 -  13920577 AC---CTTT
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                2530 6 +     20549 TC---TTTT
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               17481 6 +     45698 GC---TTTA
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      810991 6 +   1148477 AC---TTTT
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  61633 6 +     99546 AC---TTTT
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194012118 6 - 194193292 AC---CTTT
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                   592 6 -      3104 AC---TTTT
i Tolypeutes_matacus.TolMat_scaffold_475685             C 0 I 6
s Tonatia_saurophila.TonSau_scaffold_3334                  138293 6 -    259118 AT---TTTT
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trichechus_manatus.JH594618.1                          16090038 4 +  31416278 AC---TC--
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2797962 6 -   3938065 AC---TTCT
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    9897 6 +     13056 AC---TTAT
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69317398 6 -  96451834 AC---TTTT
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                     281 6 +    136657 AT---TTCT
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 C 0
s Ursus_maritimus.KK498671.1                              6520914 6 +  28682327 AC---TTTG
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  9599 6 -     20643 AC---TTGT
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             29134 6 -     33872 AC---TTGT
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1528426 6 -   2331223 AC---TTTT
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                144603 6 -    281493 AC---TTTT
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       131750 6 -    134049 AC---TTAG
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        220070 6 -    227762 AC---TTTT
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            2146 6 -     13665 AC---TTTT
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Petromus_typicus.PetTyp_scaffold_33007                    17492 0 -     36578 C
e Tragulus_javanicus.TraJav_scaffold_14717                   9488 743 +     90398 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Manis_pentadactyla.KN017078.1                             39935 0 +     58827 C
e Manis_javanica.JSZB01003966.1                            152345 0 +    252755 C
e Equus_przewalskii.ATBW01073585.1                          16581 0 +     92910 C
e Equus_caballus.CM000402.2                              13355091 0 +  41866177 C
e Equus_asinus.JREZ01000062.1                             5856591 0 -   7175178 C
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Zapus_hudsonius.ZapHud_scaffold_256618                      408 0 -      2259 C
e Jaculus_jaculus.JH725517.1                              8577673 0 +  11848649 C
e Hylobates_pileatus_a.tarseq_592                             37493 0 -     60944 C
e Hylobates_pileatus_b.ContigUN                                 14628631 0 -  25970782 C
e Allactaga_bullata.AllBul_scaffold_141108                    666 0 -      7259 C
e Hylobates_muelleri.k141_1139146                            1183 0 +      4161 C
e Hylobates_klossii.k141_468230                              3284 0 +      5464 C
e Hylobates_agilis.k141_1633646                              1767 0 -      2102 C
e Hylobates_abbotti.k141_1816750                             1797 0 +      3202 C
e Trachypithecus_pileatus.k141_1022309                       5226 0 +     13828 C
e Trachypithecus_phayrei.ctg3                            44662914 0 -  44834318 C
e Trachypithecus_obscurus.k141_1115109                       8130 0 -     28054 C
e Trachypithecus_melamera.k141_699241                        2986 0 -     24393 C
e Trachypithecus_leucocephalus.k141_381681                   3005 0 +     12481 C
e Trachypithecus_laotum.k141_760702                          4719 0 +     14371 C
e Trachypithecus_hatinhensis.k141_504423                     6067 0 -     15592 C
e Trachypithecus_germaini.k141_868450                        3883 0 -     11566 C
e Trachypithecus_geei.k141_670367                           46082 0 -     54611 C
e Trachypithecus_francoisi.k141_768164                       4689 0 -     14244 C
e Trachypithecus_cristatus.k141_1011511                      5261 0 -     12939 C
e Trachypithecus_crepusculus.k141_1588528                   23360 0 -     32910 C
e Trachypithecus_auratus.k141_738098                        29800 0 +     38948 C
e Tarsius_wallacei.k141_48636                               64696 0 +     65473 C
e Tarsius_lariang.k141_609102                               31387 0 +     42269 C
e Semnopithecus_vetulus.k141_1143185                        16479 0 +     30600 C
e Semnopithecus_schistaceus.k141_387461                     33457 0 +     42640 C
e Semnopithecus_priam.k141_410937                           40312 0 +     46263 C
e Semnopithecus_johnii.k141_785014                         121532 0 +    130994 C
e Semnopithecus_hypoleucos.k141_761524                      11528 0 +     20762 C
e Semnopithecus_entellus.k141_1572367                        6153 0 +     15331 C
e Rhinopithecus_strykeri.ctg4                            44859307 0 -  45163003 C
e Rhinopithecus_bieti.k119_554384                            2917 0 -     17045 C
e Pygathrix_nigripes_a.k141_101123                             8537 0 +     18040 C
e Pygathrix_nigripes_b.ctg79                                 6809148 0 +   6970761 C
e Pygathrix_cinerea.k141_374971                             32651 0 +     56732 C
e Presbytis_mitrata.k141_860013                              8661 0 +     14865 C
e Presbytis_comata.k141_672698                               8546 0 -     15069 C
e Pithecia_vanzolinii.k141_831006                           15424 0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514 0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521 0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292 0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093 0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038 0 +     78826 C
e Pithecia_albicans.k141_991845                             45662 0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000036.1               26743271 0 +  26888534 C
e Piliocolobus_kirkii.k141_929665                            4788 0 +      7694 C
e Piliocolobus_gordonorum.k141_1270531                       5421 0 -     17985 C
e Piliocolobus_badius.k141_1987485                           4802 0 -      5908 C
e Nasalis_larvatus.k141_153429                              11264 0 +     48152 C
e Colobus_polykomos.k141_1406057                            19335 0 +     23629 C
e Colobus_guereza.LG08                                  147667351 0 + 156195979 C
e Colobus_angolensis.KN985967.1                          10889423 0 +  10971483 C
e Cephalopachus_bancanus.k141_702587                        12545 0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530 0 +    345090 C
e Hoolock_leuconedys.ctg315                                   350415 278 +    431944 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               17727 20 +    209709 ATGT-CT----AC-T---CTT-------GAATTGA-----G
s Acinonyx_jubatus.LLWD01000356.1                         2039691 15 +   3721120 AAAT-CT----A-GT---ATT-------GA----------G
i Acinonyx_jubatus.LLWD01000356.1                       C 0 I 5
s Acomys_cahirinus.AcoCah_scaffold_1625                    117950 14 -    189883 ACTT-TT----GA-T---CTT-------GA-----------
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 I 1
s Ailuropoda_melanoleuca.LNAT01000321.1                  10663652 15 +  23371972 AAAT-CT----A-GT---CCT-------GA----------A
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 I 5
s Ailurus_fulgens.LNAC01000003.1                          7100181 15 -  16596857 AAAG-GC----A-GT---CTT-------GA----------G
i Ailurus_fulgens.LNAC01000003.1                        C 0 I 5
s Allenopithecus_nigroviridis.k141_2469532                   5600 20 -     60446 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         6317 20 -     29318 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         5255 20 +     38766 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          6211 20 -     80423 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              1194 20 +     19852 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                3438 20 -     12443 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                              737 20 +      5070 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                  482 20 -      1641 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          3221 20 -     24210 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           29803 20 -     30219 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_405616                              5639 20 +     16794 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                             771 20 -      1470 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             4916 20 -      9835 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3525708 15 +   4113121 AAAT-CT----A-GT---CAT-------GA----------C
i Ammotragus_lervia.NIVO01013474.1                      C 0 I 7
s Anoura_caudifer.AnoCau_scaffold_422                      392742 18 -    631301 AAATGCC----A--ACTACTT-------GA----------G
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 I 5
s Antilocapra_americana.AntAmePen_scaffold_27338             3139 15 +     55446 AAAT-CT----A-GT---CAT-------GA----------C
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 I 7
s Aotus_azarae.k141_3170768                                 66527 20 +     78111 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            9475 20 +     22701 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5753432 20 +   9889416 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                            10031 20 -    104377 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                              10038 20 +     23246 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     2572 15 +     11424 AACT-CT----TT-C---CTT-------GA----------G
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 I 5
s Arctocebus_calabarensis.k141_587554                        6656 15 +      9265 AAAT-CT----AG-C---CTT-------GA----------G
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                11167 18 -     29036 AAATGTC----A--ACGACTT-------GA----------G
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 I 5
s Ateles_geoffroyi_b.tarseq_2582                             9543324 20 +  39197703 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             64598 20 +     85812 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                15611 20 +     89302 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             20112 20 -     58268 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             68106 20 +    119057 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              10075 20 -     25888 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                11140 15 -     16375 AAGT-CT----AG-T---GTT-------GA----------A
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               4756 15 +      6337 AAGT-CT----AG-T---GTT-------GA----------A
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26384194 15 +  51448160 AAAT-TT----A-GT---CAT-------GA----------G
i Balaenoptera_acutorostrata.KI537095.1                 C 0 I 5
s Balaenoptera_bonaerensis.DF502048.1                        9367 15 -     13118 AAAT-TT----A-GT---CAT-------GA----------G
i Balaenoptera_bonaerensis.DF502048.1                   C 0 I 5
s Beatragus_hunteri.BeaHun_scaffold_21644                   48170 15 -     72089 AAAT-CT----A-GT---CAT-------GA----------C
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 I 7
s Bison_bison.KN264915.1                                   302314 15 -   6870073 CAAT-CT----A-GT---CAT-------GA----------C
i Bison_bison.KN264915.1                                C 0 I 7
s Bos_indicus.CM003021.1                                 22956412 15 + 161108492 CAAT-CT----A-GT---CAT-------GA----------C
i Bos_indicus.CM003021.1                                C 0 I 7
s Bos_mutus.JH883513.1                                     418677 15 +    998990 CAAT-CT----A-GT---CAT-------GA----------C
i Bos_mutus.JH883513.1                                  C 0 I 7
s Bos_taurus.CM000177.6                                  22665066 15 + 158972876 CAAT-CT----A-GT---CAT-------GA----------C
i Bos_taurus.CM000177.6                                 C 0 I 7
s Bubalus_bubalis.KI419065.1                               674820 15 +   1914593 CAAT-CT----A-GT---CAT-------GA----------C
i Bubalus_bubalis.KI419065.1                            C 0 I 7
s Cacajao_ayresi.k141_724503                               117978 20 -    171031 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 16998 20 +    125063 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                19045 20 -    216513 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       11588 20 -    134917 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3223324 10 -   8989139 AAAT-CT----A-GT---C----------------------
i Camelus_bactrianus.KN276303.1                         C 0 I 5
s Camelus_dromedarius.KN271192.1                           401025 10 -  15254737 AAAT-CT----A-GT---C----------------------
i Camelus_dromedarius.KN271192.1                        C 0 I 5
s Camelus_ferus.KB016973.1                                2976762 10 +   6889770 AAAT-CT----A-GT---C----------------------
i Camelus_ferus.KB016973.1                              C 0 I 5
s CanFam4.chr31                                          11526529 15 +  39901454 AAAT-GT----A-AT---CTT-------GA----------A
i CanFam4.chr31                                         C 0 I 5
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   21503 15 +     87036 AAAT-GT----A-AT---CTT-------GA----------A
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 I 5
s Canis_lupus_dingo.QKWQ01001993.1                       11273212 15 -  35597290 AAAT-GT----A-AT---CTT-------GA----------A
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 I 5
s Canis_lupus_familiaris.chr31                           11095923 15 +  39895921 AAAT-GT----A-AT---CTT-------GA----------A
i Canis_lupus_familiaris.chr31                          C 0 I 5
s Canis_lupus_orion.HG994411.1                           16462708 15 -  44759192 AAAT-GT----A-AT---CTT-------GA----------A
i Canis_lupus_orion.HG994411.1                          C 0 I 5
s Capra_aegagrus.CM003214.1                              21333650 15 + 157394656 AAAT-CT----A-GT---CAT-------GA----------C
i Capra_aegagrus.CM003214.1                             C 0 I 7
s Capra_hircus.CM004562.1                               135712005 15 - 157403528 AAAT-CT----A-GT---CAT-------GA----------C
i Capra_hircus.CM004562.1                               C 0 I 7
s Capromys_pilorides.CapPil_scaffold_529800                   394 15 -      2320 AAGT-CT----AA-T---CCT-------TA----------G
i Capromys_pilorides.CapPil_scaffold_529800             C 0 I 4
s Carollia_perspicillata.CarPer_scaffold_4436               62160 18 +     67245 AAATGTC----A--ACTACTT-------GA----------G
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 I 5
s Castor_canadensis.CasCan_scaffold_417865                    366 15 -       402 AAAT-AT----AC-T---CTT-------GA----------G
i Castor_canadensis.CasCan_scaffold_417865              C 0 N 0
s Catagonus_wagneri.CatWag_scaffold_1305                   162840 10 -    276539 AAAT-CT----A-GT---C----------------------
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 I 5
s Cavia_aperea.AVPZ01000278.1                            15789862 15 -  24422027 AATT-CT----AA-T---CTT-------CA----------G
i Cavia_aperea.AVPZ01000278.1                           C 0 I 3
s Cavia_porcellus.DS562889.1                             15801801 15 -  24440124 AATT-CT----AA-T---CTT-------CA----------G
i Cavia_porcellus.DS562889.1                            C 0 I 3
s Cavia_tschudii.CavTsc_scaffold_488                       179973 15 +    436027 AATT-CT----AA-T---CTT-------CA----------G
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 I 3
s Cebus_albifrons.Contig22                               18895700 20 -  29618158 ATGT-CT----AC-T---CTT-------GCATTGA-----G
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                12350 20 -     26817 ATGT-CT----AC-T---CTT-------GCATTGA-----G
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                16594 20 +     25043 ATGT-CT----AC-T---CTT-------GCATTGA-----G
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4367764 15 +   7569818 AAAT-CT----G-GT---CTT-------AA----------G
i Ceratotherium_simum.JH767818.1                        C 0 I 5
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         7521 15 -      9338 AAAT-CT----G-GT---CTT-------AA----------G
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 I 5
s Cercocebus_atys.KQ010443.1                              6559541 20 +   6739814 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      31018 20 +     60454 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          6222 20 -     21101 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         63532 20 -    107033 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        6395 20 -     17608 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          3560 20 +     45019 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           3836 20 +     15177 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          6442 20 +     16677 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           28632 20 +     35983 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11995163 20 +  12117833 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46482139 20 +  46592721 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                        256 20 -     27215 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       6456 20 +     35577 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        6250 20 -     25661 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        6422 20 -     17744 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        25791 20 +     37128 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           4764  7 -      6963 --------------T---CTT-------GA----------G
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      I 6 I 5
s Cheirogaleus_major.k141_1157592                           63361  3 -     68416 ----------------------------GA----------G
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                           12469 15 +     13308 AAGT-CT----AG-T---CTT-------GA----------G
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             9637 20 -     18223 ATGT-CT----AC-T---CTC-------GAACTGA-----G
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              1375 20 +    188999 ATGT-CT----AC-T---CTC-------GAACTGA-----G
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           45674 20 +     57117 ATGT-CT----AC-T---CTC-------GAACTGA-----G
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          50354 20 +     54541 ATGT-CT----AC-T---CTC-------GAACTGA-----G
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15964547 15 +  43084221 AAGT-CT----AA-T---CCC-------CA----------G
i Chinchilla_lanigera.JH721867.1                        C 0 I 4
s Chiropotes_israelita.k141_1189915                         75157 20 +    196370 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          19338 20 +     40510 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15143976 20 -  15256731 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      38440 20 -     53260 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101148999 20 + 101219884 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                18866 15 -     21363 GAGT-GG----AG-T---CTT-------GA----------G
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 I 5
s Choloepus_hoffmanni.KN194586.1                           764170 15 +    964067 GAGT-GG----AG-T---CTT-------GA----------G
i Choloepus_hoffmanni.KN194586.1                        C 0 I 5
s Chrysochloris_asiatica.ChrAsi_scaffold_629495              2408 13 -      3120 AAAT-TT----AG-T---CTT-------G------------
i Chrysochloris_asiatica.ChrAsi_scaffold_629495         C 0 I 7
s Condylura_cristata.JH655880.1                          60622354 14 +  78930452 AAAT-CT----A-GA----CT-------GG----------G
i Condylura_cristata.JH655880.1                         C 0 I 5
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         2692 15 -      5782 ACATCTA----C--T---CCT-------GA----------G
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 I 5
s Cricetomys_gambianus.CriGam_scaffold_949                 282837 14 -    399297 AAGT-CT----GA-T---CTT-------GA-----------
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53035206 14 +  72327488 AAGT-GT----GA-T---CCT-------GA-----------
i Cricetulus_griseus.LT883672.1                         C 0 I 1
s Crocidura_indochinensis.CroInd_scaffold_27484              2262 19 -     22648 AAAA-AA----A--T---ATTTT--AAAAA----------C
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 I 5
s Cryptoprocta_ferox.CryFer_flattened_line_19014            57677 15 -     70449 AAAT-CT----A-GT---CTT-------GA----------G
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 I 5
s Ctenodactylus_gundi.CteGun_scaffold_447                  214450 12 -    956709 AAAT-GT----AG-A---CTT--------------------
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 I 1
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 34514 15 -     67205 AAGT-AC----AC-T---CTT-------TA----------C
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 I 4
s Cuniculus_paca.CunPac_flattened_line_16637                21035 15 +     26546 AATT-CT----AA-T---CTT-------CA----------G
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 I 4
s Dasyprocta_punctata.DasPun_flattened_line_634             62174 15 -    236241 AATT-CT----CA-T---CTT-------CA----------G
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 I 4
s Dasypus_novemcinctus.JH568778.1                          185845  7 -   6883506 --------------T---CTT-------GA----------G
i Dasypus_novemcinctus.JH568778.1                       I 6 I 5
s Daubentonia_madagascariensis.ctg11                     16849300 15 +  31942871 AAGT-CT----AG-T---CTT-------GA----------G
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80040817 15 -  96802777 AAAT-TT----A-GT---CAT-------GA----------G
i Delphinapterus_leucas.KZ290064.1                      C 0 I 5
s Desmodus_rotundus.KZ672188.1                           18701375 18 -  18957592 AAATGCC----A--GCTACTT-------GA----------G
i Desmodus_rotundus.KZ672188.1                          C 0 I 5
s Dicerorhinus_sumatrensis.PEKH010003161.1                 326413 15 +    993696 AAAT-CT----G-GT---CTT-------AA----------G
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 I 5
s Diceros_bicornis.DicBicMic_scaffold_9545                   7052 15 +    151128 AAAT-CT----G-GT---CTT-------AA----------G
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 I 5
s Dinomys_branickii.DinBra_scaffold_1996                   159808 15 +    228994 AAGT-CT----AA-T---CCT-------CG----------G
i Dinomys_branickii.DinBra_scaffold_1996                C 0 I 4
s Dipodomys_ordii.KN672545.1                              3660524 15 +   4240102 AAGT-CT----GA-T---CAT-------GA----------G
i Dipodomys_ordii.KN672545.1                            C 0 I 6
s Dipodomys_stephensi.DipSte_scaffold_84338                  2878 15 -     11986 AAGT-CT----GA-T---CAT-------GA----------G
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 I 6
s Dolichotis_patagonum.DolPat_scaffold_14102                40758 15 -     73477 AATT-CT----AA-T---CTT-------CA----------G
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 I 4
s Echinops_telfairi.JH980316.1                           23000075 13 -  44670279 AAAT-GT----GG-G---CCA-------G------------
i Echinops_telfairi.JH980316.1                          C 0 I 7
s Elaphurus_davidianus.JRFZ01086400.1                     1496386 15 +   1727528 AAAC-CT----A-GC---CAT-------GA----------C
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 I 7
s Elephantulus_edwardii.JH947210.1                        7833131 13 +  15467074 CAGG-GC----AC-T---GCT-------G------------
i Elephantulus_edwardii.JH947210.1                      C 0 I 7
s Ellobius_lutescens.LOEQ01003611.1                        244004 14 -    369425 AAAT-AT----GA-T---CTT-------GA-----------
i Ellobius_lutescens.LOEQ01003611.1                     C 0 I 1
s Enhydra_lutris.KZ291749.1                              85877645 15 +  99434291 AAAT-GT----A-GT---CTT-------GA----------A
i Enhydra_lutris.KZ291749.1                             C 0 I 20
s Eptesicus_fuscus.JH977687.1                             4709134 15 +   6522550 aaatgta----a--t---ttt-------ga----------g
i Eptesicus_fuscus.JH977687.1                           C 0 I 5
s Erinaceus_europaeus.JH835290.1                         11541479 15 +  16010500 AAAT-CT----G-GC---CTA-------GA----------A
i Erinaceus_europaeus.JH835290.1                        C 0 I 5
s Erythrocebus_patas.Contig8                             48781009 20 -  48907691 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          319037 15 +    330699 AAAT-TT----A-GT---CAT-------GA----------G
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 I 5
s Eubalaena_japonica.EubJap_flattened_line_7756             65494 15 +     89355 AAAT-TT----A-GT---CAT-------GA----------G
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 I 5
s Eulemur_albifrons.k141_715837                              9453 15 +     13586 AAGT-CT----AG-T---CTT-------GA----------G
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_1015201                              2715 15 -      4292 AAGT-CT----AG-T---CTT-------GA----------G
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            15849 15 +     36558 AAGT-CT----AG-T---CTT-------GA----------G
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            12174 15 +     60246 AAGT-CT----AG-T---CTT-------GA----------G
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                15656 15 +    109717 AAGT-CT----AG-T---CTT-------GA----------G
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 3642 15 -     19505 AAGT-CT----AG-T---CTT-------GA----------G
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                20314 15 +     27497 AAGT-CT----AG-T---CTT-------GA----------G
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           22770 15 +     26808 AAGT-CT----AG-T---CTT-------GA----------G
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                37505 15 +     46535 AAGT-CT----AG-T---CTT-------GA----------G
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              20243 15 -     29447 AAGT-CT----AG-T---CTT-------GA----------G
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129899111 15 - 159252932 AAAT-CT----A-GT---ATT-------GA----------G
i Felis_catus.CM001386.2                                I 425 I 5
s Felis_catus_fca126.CM031420.1                         129286086 15 - 158578461 AAAT-CT----A-GT---ATT-------GA----------G
i Felis_catus_fca126.CM031420.1                         C 0 I 5
s Felis_nigripes.FelNig_flattened_line_8080                 27185 15 +     52776 AAAT-CT----A-GT---ATT-------GA----------G
i Felis_nigripes.FelNig_flattened_line_8080             C 0 I 5
s Fukomys_damarensis.KN123630.1                          13896321 15 -  19261668 AAGT-CG----GC-T---GTT-------CA----------G
i Fukomys_damarensis.KN123630.1                         C 0 I 2
s Galago_moholi.ctg555                                     215503 15 -    847004 AAAT-CT----GG-T---CTT-------GA----------T
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           17864 15 -     43889 AAAT-CT----TG-T---CTT-------GA----------T
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          15008 15 +     27357 AAAT-CT----GC-T---CTT-------GA----------G
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               159753 15 +    324696 AAGT-CT----AG-T---CCT-------AA----------G
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 I 4
s Giraffa_tippelskirchi.LVKQ01S012154.1                    186184 15 -    189561 AAAT-CT----A-GT---CAT-------GA----------C
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 I 1
s Glis_glis.GliGli_scaffold_79770                           16648 15 -     18683 AAGT-CT----AG-C---CTT-------GA----------G
i Glis_glis.GliGli_scaffold_79770                       C 0 I 5
s Gorilla_beringei.k141_111300                               9424 20 -     14630 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119656524 20 - 195582420 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   79962 15 +    118900 CAGT-CT----AG-T---CCT-------GA----------G
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 I 5
s Hapalemur_alaotrensis.k141_1280836                         6236 15 +     10286 AAGT-CT----AG-T---CTT-------GA----------G
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             4714 15 -     11661 AAGT-CT----AG-T---CTT-------GA----------G
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                            10041 15 +     56096 AAGT-CT----AG-T---CTT-------GA----------G
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        33290 15 -     42470 AAGT-CT----AG-T---CTT-------GA----------G
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        49913 15 -     54384 AAGT-CT----AG-T---CTT-------GA----------G
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              22815 15 +     53719 AAAT-CT----G-GT---CTT-------GA----------G
i Helogale_parvula.HelPar_flattened_line_22962          C 0 I 5
s Hemitragus_hylocrius.HemHyl_scaffold_16669                33055 15 -     91191 AAAT-CT----A-GT---CAT-------GA----------C
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 I 7
s Heterocephalus_glaber.JH602058.1                        2560812 15 +  31725842 AAGT-CT----AG-T---CTT-------CA----------G
i Heterocephalus_glaber.JH602058.1                      C 0 I 5
s Heterohyrax_brucei.HetBruBak_scaffold_25354               63038 18 +     73687 CAGT-GT----AG-T---CTTCAGT-T-G------------
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 I 2
s Hippopotamus_amphibius.HipAmp_scaffold_1308              150819 15 +    277961 AAAT-TT----A-GT---CAT-------GA----------G
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 I 5
s Hipposideros_armiger.JXIK01001085.1                      283217 15 -    477199 AAATCTA----G--T---CTT-------GA----------G
i Hipposideros_armiger.JXIK01001085.1                   C 0 I 47
s Hipposideros_galeritus.HipGal_scaffold_52959                987 15 +     26078 AAATCCA----G--T---CTT-------GA----------G
i Hipposideros_galeritus.HipGal_scaffold_52959          I 84 I 52
s Hyaena_hyaena.HyaHya_flattened_line_20729                 23287 15 -     67322 GAAT-CT----A-GT---CTT-------GA----------G
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 I 5
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           21426 15 -    119109 AATT-CT----AA-T---CTT-------CA----------G
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 I 4
s Hystrix_cristata.HysCri_scaffold_50788                     9716 15 +     22540 AAAT-CT----AG-G---CTT-------CG----------G
i Hystrix_cristata.HysCri_scaffold_50788                C 0 I 3
s Ictidomys_tridecemlineatus.JH393315.1                   7130556 15 +  13083262 AAGC-CT----AT-C---CTT-------GA----------G
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 I 5
s Indri_indri.k141_2197838                                   1760 15 +      3484 AAGT-CT----AG-T---GTT-------GA----------G
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              13029 15 +     17520 AAAT-TT----A-GT---CAT-------GA----------G
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 I 5
s Kogia_breviceps.KogBre_flattened_line_35920               27648 15 +     37189 AAAT-TT----A-GT---CAT-------GA----------G
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 I 5
s Lagothrix_lagothricha.k141_12968                          54193 20 -    147782 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    5746 15 +     26176 AAATGTA----A--T---TTT-------GA----------G
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 I 5
s Lemur_catta.scaffold_1                                258411588 15 - 285822530 AAGT-CT----AG-T---CTT-------GA----------G
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        28902 15 +     39228 AAGT-CT----AG-T---CGT-------GA----------G
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            58266 15 +     63517 AAGT-CT----AG-T---CGT-------GA----------G
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        36646 15 -     38897 AAGT-CT----AG-T---TGT-------GA----------G
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      2692 15 -     13103 AAGT-CT----AG-T---CGT-------GA----------G
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3091621 15 -   3498232 AAAC-GT----A-GT---CTT-------GA----------A
i Leptonychotes_weddellii.KB714749.1                    C 0 I 5
s Lepus_americanus.LepAme_scaffold_62849                    21054 15 +     22452 AAGT-CT----AG-T---CTT-------GA----------G
i Lepus_americanus.LepAme_scaffold_62849                C 0 I 1
s Lipotes_vexillifer.KE558548.1                            139963 15 +   3060487 AAAT-TT----A-GT---CAT-------GA----------G
i Lipotes_vexillifer.KE558548.1                         C 0 I 5
s Lophocebus_aterrimus.ctg55                             19252630 20 +  19376315 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           15453 15 +     84689 AAAT-CT----AG-T---CTT-------GA----------G
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3783192 15 +   6799190 AAAT-CT----AG-T---CTT-------GA----------G
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20598969 13 -  62548349 AAGT-GT----AG-T---CTT-------G------------
i Loxodonta_africana.GL010040.1                         C 0 I 2
s Lycaon_pictus.CM007556.1                               11095379 15 +  39895028 AAAT-GT----A-AT---CTT-------GA----------A
i Lycaon_pictus.CM007556.1                              C 0 I 5
s Macaca_arctoides.k141_2201161                             24381 20 +     74745 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12710842 20 +  12821369 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                3415 20 -     26467 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           51286 20 +     63263 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 3396 20 -     26361 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 6586 20 -      7381 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  49815 20 -     79256 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196039913 20 + 196197964 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11450083 20 +  11645122 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   8769 20 -     46448 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                6432 20 -     13212 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 20112 20 -     55006 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43845227 20 +  43892939 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               21396 20 -     24607 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               8766 20 -     27140 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43441802 20 -  43563597 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4454606 20 -   4543643 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            152345 11 +    252755 -----CT----A-GT---CTT-------GA----------G
i Manis_javanica.JSZB01003966.1                         C 0 I 5
s Manis_pentadactyla.KN017078.1                             39935 11 +     58827 -----CT----A-GT---CTT-------GA----------G
i Manis_pentadactyla.KN017078.1                         C 0 I 5
s Marmota_marmota.CZRN01000005.1                         36878428 15 +  64221397 AAGC-CT----AG-C---CTT-------GA----------G
i Marmota_marmota.CZRN01000005.1                        C 0 I 5
s Megaderma_lyra.MegLyr_scaffold_3562                       65774 15 -    234502 AAATCTG----G--T---CTT-------GA----------G
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 I 5
s Mellivora_capensis.MelCap_flattened_line_15433             6537 15 -     87323 AAAT-AT----A-GT---CTT-------GA----------A
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 I 20
s Meriones_unguiculatus.MerUng_scaffold_9483                 1452 14 +    115071 ATTC-CG----GA-T---CTT-------AA-----------
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 I 1
s Mesocricetus_auratus.KB708139.1                         1051725 14 -  26018355 AAGT-AT----GA-T---CTT-------GA-----------
i Mesocricetus_auratus.KB708139.1                       C 0 I 21
s Mesoplodon_bidens.MesBid_scaffold_96348                    2620 15 -     12939 AAAT-TT----A-GT---CAT-------GA----------G
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 I 5
s Microcebus_murinus.CM007691.1                          16514620 15 +  47401472 AAGT-CT----AG-T---CTT-------GA----------G
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  41635 13 -     48017 AAAT-GT----GG-G---CCA-------G------------
i Microgale_talazaci.MicTal_scaffold_34660              C 0 I 7
s Micronycteris_hirsuta.MicHir_scaffold_37978               25122 18 -     32043 AAATGCC----A--ATTACTT-------GA----------G
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 I 21
s Microtus_ochrogaster.CM001673.1                        22824802 14 -  98408828 AAGA-AT----GA-T---CTT-------Ga-----------
i Microtus_ochrogaster.CM001673.1                       C 0 I 20
s Miniopterus_natalensis.LDJU01000022.1                   8213184 14 +  10048721 aaatgga----c--t---cTT-------AG-----------
i Miniopterus_natalensis.LDJU01000022.1                 C 0 I 2
s Miniopterus_schreibersii.MinSch_scaffold_24116            37673 14 +     45743 AAATGAA----C--T---CTT-------AG-----------
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 I 2
s Miopithecus_ogouensis.k141_2935907                         6348 20 +     29742 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        17117 15 -    104932 AAAC-GT----A-GT---CTT-------GA----------A
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 I 5
s Mirza_zaza.k141_593947                                     5303 15 -     12809 AAGT-CT----AG-T---CTT-------GA----------G
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 150410 15 +    154973 AAAT-TT----A-GT---CAT-------GA----------G
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 I 5
s Mormoops_blainvillei.MorMeg_scaffold_2952                163662 15 +    265003 AAATATC----A--T---CTT-------GA----------G
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 I 5
s Moschus_moschiferus.MosMos_scaffold_78805                  6404 15 -     19904 AAAT-CT----A-GT---CAT-------GA----------C
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 I 7
s Mungos_mungo.MunMun_flattened_line_8729                  150490 15 -    168139 AAAT-CT----A-GT---CTT-------GC----------G
i Mungos_mungo.MunMun_flattened_line_8729               C 0 I 5
s Murina_feae.MurFea_scaffold_2254                          24596 15 -    100666 AAATGCT----A--T---TTT-------GA----------G
i Murina_feae.MurFea_scaffold_2254                      C 0 I 5
s Mus_caroli.LT608236.1                                  70772027 14 +  92629107 ACGT-CT----GA-T---TTT-------GA-----------
i Mus_caroli.LT608236.1                                 C 0 I 1
s Mus_musculus.chr16                                     75494081 14 +  98207768 AAGT-CT----GA-T---CTT-------GA-----------
i Mus_musculus.chr16                                    C 0 I 1
s Mus_pahari.LT608305.1                                  67560833 14 +  89017189 ATGT-CT----GC-T---CTT-------GA-----------
i Mus_pahari.LT608305.1                                 C 0 I 1
s Mus_spretus.CM004110.1                                 74336807 14 +  97876770 AAGT-CT----GA-T---CTT-------GA-----------
i Mus_spretus.CM004110.1                                C 0 I 1
s Muscardinus_avellanarius.MusAve_scaffold_9643             15053 15 +     98495 AAGT-CT----AG-T---CCC-------GA----------G
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 I 5
s Mustela_putorius.JH417978.1                             4428854 15 -  28371801 AAAT-GT----A-GT---CTT-------GA----------T
i Mustela_putorius.JH417978.1                           C 0 I 20
s Myocastor_coypus.MyoCoy_scaffold_3653                     94017 14 -    117718 -AGT-CT----AA-T---CTT-------TA----------G
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 I 4
s Myotis_brandtii.KE161952.1                               971468 15 +   8389877 aaatgta----a--t---ttt-------ga----------g
i Myotis_brandtii.KE161952.1                            C 0 I 5
s Myotis_davidii.KB114863.1                               5022888 15 +   6462685 aaatgta----a--t---ttt-------ga----------g
i Myotis_davidii.KB114863.1                             C 0 I 5
s Myotis_lucifugus.GL429887.1                             3468972 15 -   3747815 aaatgta----a--t---ttt-------ga----------g
i Myotis_lucifugus.GL429887.1                           C 0 I 5
s Myotis_myotis.MyoMyo_scaffold_6123                        14213 15 +     66751 AAATGTA----A--T---TTT-------GA----------G
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 I 5
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             7814 15 -      8794 TAGT-CA----AG-T---TGT-------AT----------G
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 I 5
s Nannospalax_galili.KL201303.1                            120551 15 +    362372 AAGC-CT----AG-T---CTT-------GA----------A
i Nannospalax_galili.KL201303.1                         C 0 I 1041
s Neomonachus_schauinslandi.NINY01007774.1                4490515 15 -  14209539 AAAC-GT----A-GT---CTT-------GA----------A
i Neomonachus_schauinslandi.NINY01007774.1              C 0 I 5
s Neophocaena_asiaeorientalis.KZ688543.1                  3955001 15 -   4490290 AAAT-TT----A-GT---CAT-------GA----------G
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 I 5
s Noctilio_leporinus.NocLep_scaffold_12062                  50723 15 +     94413 AAATGTC----A--T---CTT-------GA----------G
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 I 5
s Nomascus_annamensis.k141_762468                             416 20 -      2755 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Nomascus_annamensis.k141_762468                       C 0 C 0
s Nomascus_concolor.k141_70405                               1036 20 +      1153 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Nomascus_concolor.k141_70405                          C 0 I 42
s Nomascus_gabriellae.k141_1400361                            967 20 -      2203 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_453                             6279 20 +     12787 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Nomascus_siki_b.tarseq_453                        C 0 C 0
s Nomascus_siki_a.k141_421408                                   881 20 +     16235 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                38244 15 +   3668941 aaat-gt----a-at---att-------GA----------A
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 I 5
s Nycticebus_bengalensis.LG16                            65572129 15 -  95554990 AAAT-CT----AA-T---CCT-------GA----------G
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_771591                            15539 15 +     16181 AAAT-CT----AA-T---CCT-------GA----------G
i Nycticebus_coucang.k141_771591                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65680317 15 +  89412551 AAAT-CT----AA-T---CTT-------GA----------G
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            5000095 15 -  23139505 AAGT-TT----AG-T---CTT-------GA----------G
i Ochotona_princeps.JH802095.1                          C 0 I 5
s Octodon_degus.JH651621.1                                3689505 15 +  10294119 AAGT-CT----AA-T---TTT-------TA----------G
i Octodon_degus.JH651621.1                              C 0 I 4
s Odobenus_rosmarus.KB229369.1                             685218 15 -   3126709 AAAT-GT----A-GT---CTT-------GA----------A
i Odobenus_rosmarus.KB229369.1                          C 0 I 5
s Odocoileus_virginianus.KZ101650.1                       1083834 15 +   1425656 AAAC-CT----A-GT---CAT-------GA----------C
i Odocoileus_virginianus.KZ101650.1                     C 0 I 7
s Okapia_johnstoni.LVCL01S0017931.1                         41918 15 +     78940 AAAT-CT----A-GT---CAT-------GA----------C
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 I 1
s Ondatra_zibethicus.OndZib_scaffold_6821                  130598 14 +    145789 AAGT-AT----GA-T---CTT-------GA-----------
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 I 20
s Onychomys_torridus.OnyTor_scaffold_12578                  43293 14 +     62360 AAGC-AT----GA-T---CTT-------GA-----------
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 I 1
s Orcinus_orca.KB316965.1                                 7228675 15 -   7562323 AAAT-TT----A-GT---CAT-------GA----------G
i Orcinus_orca.KB316965.1                               C 0 I 5
s Orycteropus_afer.OryAfe_flattened_line_13509              64410 13 -     66828 AAGT-GT----AG-T---CTA-------T------------
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 I 9
s Oryctolagus_cuniculus.CM000803.1                      141884071 15 + 163896628 AAGT-TT----AG-T---CTT-------GT----------G
i Oryctolagus_cuniculus.CM000803.1                      C 0 I 1
s Otocyon_megalotis.JAEUCK010005121.1                      315382 15 -    505867 AAAT-GT----A-AT---CTT-------GA----------A
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 I 5
s Otolemur_crassicaudatus.k141_505435                        5365 15 -     53940 AAAT-CT----GG-T---CTT-------GA----------G
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18013334 15 -  38779656 AAAT-CT----GG-T---CTT-------GA----------G
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134082841 15 - 275406953 AAAT-CT----A-GT---CAT-------GA----------C
i Ovis_aries.CM001582.2                                 C 0 I 7
s Ovis_canadensis.OviCan_scaffold_6251                      84075 15 +    140051 AAAT-CT----A-GT---CAT-------GA----------C
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 I 7
s Pan_paniscus.CM003386.1                               127578703 20 - 205426864 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120155863 20 - 196562556 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  40105 15 +    295523 AAAT-CT----A-GT---ATT-------GA----------G
i Panthera_onca.PanOnc_flattened_line_1615              C 0 I 5
s Panthera_pardus.KV860323.1                              3643920 15 +  18214204 AAAT-CT----A-GT---ATT-------GA----------G
i Panthera_pardus.KV860323.1                            C 0 I 5
s Panthera_tigris.KE721879.1                              5033568 15 -   6340057 AAAT-CT----A-GT---ATT-------GA----------G
i Panthera_tigris.KE721879.1                            C 0 I 5
s Pantholops_hodgsonii.KE114631.1                         1071711 15 -   1292953 AAAT-CT----A-GT---CAT-------GG----------C
i Pantholops_hodgsonii.KE114631.1                       C 0 I 7
s Papio_anubis.CM001492.2                               188160591 20 - 188283584 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              3681 20 +     25005 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47517963 20 +  47705337 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 71954 20 -    104429 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   10486 20 +     14967 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 6351 20 -      7628 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    121592 15 -    135482 AAAT-CT----A-GT---CTT-------GA----------G
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 I 5
s Perodicticus_ibeanus.k141_117958                          11029 15 -     23713 AAAT-CT----AG-C---CTT-------GA----------G
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           12180 15 +     61070 AAAT-CT----AG-C---CTT-------GA----------G
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       2445 15 +     49596 AAGT-CT----AG-A---CAT-------GA----------G
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 I 6
s Peromyscus_maniculatus.KI615518.1                       4955659 14 -   8017169 AAGC-AT----GA-T---CTT-------GA-----------
i Peromyscus_maniculatus.KI615518.1                     C 0 I 21
s Phocoena_phocoena.PhoPho_flattened_line_53071              3142 15 +      8220 AAAT-TT----A-GT---CAT-------GA----------G
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 I 5
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            99759 11 +    112873 AAATGTA----A--T---TT---------------------
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 I 2
s Platanista_gangetica.PlaMin_flattened_line_72990           9613 15 +     21690 AAAT-TT----A-GT---CAT-------GA----------G
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 I 5
s Plecturocebus_bernhardi.k141_959214                       26286 20 +     44506 ATGT-CT----AC-T---CTC-------GAACTGA-----G
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        26499 20 +     67491 ATGT-CT----AC-T---CTC-------GAACTGA-----G
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      16738 20 -     98129 ATGT-CT----AC-T---CTC-------GAACTGA-----G
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     26339 20 +    147771 ATGT-CT----AC-T---CTC-------GAACTGA-----G
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         2974 20 -     43940 ATGT-CT----AC-T---CTC-------GAACTGA-----G
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          7057 20 -     55515 ATGT-CT----AC-T---CTC-------GAACTGA-----G
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         26411 20 +    152463 ATGT-CT----AC-T---CTC-------GAACTGA-----G
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       4219 20 -    119457 ATGT-CT----AC-T---CTC-------AAACTGA-----G
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         16134 20 +    134592 ATGT-CT----AC-T---CTC-------GAACTGA-----G
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          26721 20 -     75465 ATGT-CT----AC-T---CTC-------GAACTGA-----G
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              191334 20 -    373494 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19811981 20 +  19899266 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                4143 18 -      9567 AAGT-GT----AG-T---CTTCAG-CT-G------------
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 I 2
s Prolemur_simus.MPIZ01000048.1                           6852962 15 +  12164890 AAGT-CT----AG-T---CTT-------GA----------G
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     21771 15 -     30946 NNNN-NN----NN-N---NNN-------NN----------N
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         8048 15 +     11805 AAGT-CT----AG-T---GTT-------GA----------G
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           47382 15 +     52369 AAGT-CT----AG-T---GTT-------GA----------G
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         39769 15 -     44753 AAGT-CT----AG-T---GTT-------GA----------G
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            21692 15 +     27322 AAGT-CT----AG-T---GTT-------GA----------G
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       21341 15 -     53241 AAGT-CT----AG-T---GTT-------GA----------G
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         43604 15 -     48185 AAGT-CT----AG-T---GTT-------GA----------G
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           38447 14 +     77221 ATGT-CA----TA-T---CTT-------AG-----------
i Psammomys_obesus.NESX01026517.1                       C 0 I 1
s Pteronotus_parnellii.KE867983.1                            6305 15 -     27784 aaatgtt----c--t---ctt-------GA----------G
i Pteronotus_parnellii.KE867983.1                       C 0 I 5
s Pteronura_brasiliensis.PteBra_flattened_line_1343        250505 15 -    344369 AAAT-GT----A-GT---CTT-------GA----------A
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 I 20
s Puma_concolor.QAVW01000427.1                          131540217 15 - 161321710 AAAT-CT----A-GT---ATT-------GA----------G
i Puma_concolor.QAVW01000427.1                          C 0 I 5
s Rangifer_tarandus.RanTarSib_scaffold_24239                20699 15 +     68503 AAAC-CT----A-GT---CAT-------AA----------C
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 I 7
s Rattus_norvegicus.chr11                                13917866 14 +  90463843 AAGT-CT----GA-T---CTT-------GA-----------
i Rattus_norvegicus.chr11                               C 0 I 1
s Rhinolophus_sinicus.LVEH01000179.1                      1792817 15 +   2252614 AAATCTA----G--T---CTT-------GA----------G
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 I 5
s Saiga_tatarica.SaiTat_scaffold_371890                      1110 15 -      4338 AAAT-CT----A-GT---CAT-------GA----------C
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 I 7
s Saimiri_boliviensis.NW_024100938.1                     15676742 20 -  43202129 ATGT-CT----AC-T---CTT-------GAACTGA-----G
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        8655 20 +     34089 ATGT-CT----AC-T---CTT-------GAACTGA-----G
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              8595 20 -     60842 ATGT-CT----AC-T---CTT-------GAACTGA-----G
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              8689 20 +     67014 ATGT-CT----AC-T---CTT-------GAACTGA-----G
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              8666 20 +     60816 ATGT-CT----AC-T---CTT-------GAACTGA-----G
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 8603 20 -     76454 ATGT-CT----AC-T---CTT-------GAACTGA-----G
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17345388 20 -  30362882 ATGT-CT----AC-T---CTT-------GCATTGA-----G
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         24709 20 -     62485 ATGT-CT----AC-T---CTT-------GCATTGA-----G
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   39831 15 -    114521 AAAT-CT----A-GA---CCT-------GA----------G
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 I 5
s Sigmodon_hispidus.SigHis_scaffold_11332                  105660 14 -    120886 AAGT-AT----GA-T---CTT-------GA-----------
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 I 21
s Solenodon_paradoxus.SolPar_flattened_line_1012            23757 14 +    739146 AAAG-GT----A--T---ATT-------GA----------G
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 I 5
s Sorex_araneus.JH798170.1                               17773974 30 -  27805282 TCCT-AATCCTC--T---ACTTTGTCTAAA-----CTTAAG
i Sorex_araneus.JH798170.1                              C 0 I 5
s Spermophilus_dauricus.KZ294190.1                        2244260 15 +   2842873 AAGC-CT----AG-C---CTT-------GA----------G
i Spermophilus_dauricus.KZ294190.1                      C 0 I 5
s Spilogale_gracilis.SpiGra_flattened_line_905             239287 15 -    276980 AGAT-GT----A-CT---CTT-------GA----------A
i Spilogale_gracilis.SpiGra_flattened_line_905          I 271 I 5
s Suricata_suricatta.SurSur_flattened_line_20339            33407 15 +     62062 AAAT-CT----A-GT---CTT-------GA----------G
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 I 5
s Sus_scrofa.CM000824.4                                 189275199 10 + 218635234 AAAT-CT----A-GT---C----------------------
i Sus_scrofa.CM000824.4                                 C 0 I 3
s Symphalangus_syndactylus.tarseq_24                        19004 20 -  13920577 ATGT-CT----AC-T---CTT-------GAACTGA-----G
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                2536 15 +     20549 AAATGTA----G--T---CTT-------GA----------G
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 I 5
s Tamandua_tetradactyla.TamTet_scaffold_26877               17487 15 +     45698 TAGT-CA----AG-T---TGT-------AT----------G
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 I 5
s Tapirus_indicus.TapInd_scaffold_176                      810997 15 +   1148477 AAAT-CT----A-GT---CTT-------AA----------G
i Tapirus_indicus.TapInd_scaffold_176                   C 0 I 5
s Tapirus_terrestris.TapTer_scaffold_14939                  61639 15 +     99546 AAAT-CT----A-GT---CTT-------AA----------G
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 I 5
s Theropithecus_gelada.CM009951.1                       194012124 20 - 194193292 ATGT-CT----AC-T---CTT-------GAATTGA-----G
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                   604  7 -      3104 --------------T---CTT-------GA----------G
i Tolypeutes_matacus.TolMat_scaffold_475685             I 6 I 5
s Tonatia_saurophila.TonSau_scaffold_3334                  138299 18 -    259118 AAATGTC----A--ACTACTT-------GA----------G
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 I 5
s Trichechus_manatus.JH594618.1                          16090042  8 +  31416278 ------A----AG-T---Ctt-------g------------
i Trichechus_manatus.JH594618.1                         C 0 I 2
s Tupaia_chinensis.KB320831.1                             2797968 14 -   3938065 AAGT-CT----AA-T----TT-------GA----------G
i Tupaia_chinensis.KB320831.1                           C 0 I 5
s Tupaia_tana.TupTan_flattened_line_68454                    9903 14 +     13056 AAGT-CT----AA-T----TT-------GA----------G
i Tupaia_tana.TupTan_flattened_line_68454               C 0 I 5
s Tursiops_truncatus.MRVK01000923.1                      69317404 15 -  96451834 AAAT-TT----A-GT---CAT-------GA----------G
i Tursiops_truncatus.MRVK01000923.1                     C 0 I 5
s Uropsilus_gracilis.UroGra_scaffold_4115                     287 15 +    136657 AAAT-CT----A-GT---CCT-------GA----------G
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 I 5
s Ursus_maritimus.KK498671.1                              6520920 15 +  28682327 AAAT-CT----A-GT---CCT-------GA----------A
i Ursus_maritimus.KK498671.1                            C 0 I 5
s Varecia_rubra.k141_432109                                  9605 15 -     20643 AAGT-CT----AG-T---CTT-------GA----------G
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             29140 15 -     33872 AAGT-CT----AG-T---CTT-------GA----------G
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1528432 10 -   2331223 AAAT-CT----A-GT---C----------------------
i Vicugna_pacos.KN269600.1                              C 0 I 5
s Vulpes_lagopus.VulLag_flattened_line_2045                144609 15 -    281493 AAAT-GT----A-AT---CTT-------GA----------A
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 I 5
s Xerus_inauris.XerIna_scaffold_7898                       131756 15 -    134049 AAGT-CT----AG-C---CTT-------GA----------G
i Xerus_inauris.XerIna_scaffold_7898                    C 0 I 5
s Zalophus_californianus.ZalCal_flattened_line_4097        220076 15 -    227762 AAAT-GT----A-GT---CTT-------GA----------A
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 I 5
s Ziphius_cavirostris.ZipCav_flattened_line_60625            2152 15 -     13665 AAAT-TT----A-GT---CAT-------GA----------G
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 I 5
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Petromus_typicus.PetTyp_scaffold_33007                    17492  0 -     36578 C
e Tragulus_javanicus.TraJav_scaffold_14717                   9488 743 +     90398 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Equus_przewalskii.ATBW01073585.1                          16581  0 +     92910 C
e Equus_caballus.CM000402.2                              13355091  0 +  41866177 C
e Equus_asinus.JREZ01000062.1                             5856591  0 -   7175178 C
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Zapus_hudsonius.ZapHud_scaffold_256618                      408  0 -      2259 C
e Jaculus_jaculus.JH725517.1                              8577673  0 +  11848649 C
e Hylobates_pileatus_a.tarseq_592                             37493  0 -     60944 C
e Hylobates_pileatus_b.ContigUN                                 14628631  0 -  25970782 C
e Allactaga_bullata.AllBul_scaffold_141108                    666  0 -      7259 C
e Hylobates_muelleri.k141_1139146                            1183  0 +      4161 C
e Hylobates_klossii.k141_468230                              3284  0 +      5464 C
e Hylobates_agilis.k141_1633646                              1767  0 -      2102 C
e Hylobates_abbotti.k141_1816750                             1797  0 +      3202 C
e Trachypithecus_pileatus.k141_1022309                       5226  0 +     13828 C
e Trachypithecus_phayrei.ctg3                            44662914  0 -  44834318 C
e Trachypithecus_obscurus.k141_1115109                       8130  0 -     28054 C
e Trachypithecus_melamera.k141_699241                        2986  0 -     24393 C
e Trachypithecus_leucocephalus.k141_381681                   3005  0 +     12481 C
e Trachypithecus_laotum.k141_760702                          4719  0 +     14371 C
e Trachypithecus_hatinhensis.k141_504423                     6067  0 -     15592 C
e Trachypithecus_germaini.k141_868450                        3883  0 -     11566 C
e Trachypithecus_geei.k141_670367                           46082  0 -     54611 C
e Trachypithecus_francoisi.k141_768164                       4689  0 -     14244 C
e Trachypithecus_cristatus.k141_1011511                      5261  0 -     12939 C
e Trachypithecus_crepusculus.k141_1588528                   23360  0 -     32910 C
e Trachypithecus_auratus.k141_738098                        29800  0 +     38948 C
e Tarsius_wallacei.k141_48636                               64696  0 +     65473 C
e Tarsius_lariang.k141_609102                               31387  0 +     42269 C
e Semnopithecus_vetulus.k141_1143185                        16479  0 +     30600 C
e Semnopithecus_schistaceus.k141_387461                     33457  0 +     42640 C
e Semnopithecus_priam.k141_410937                           40312  0 +     46263 C
e Semnopithecus_johnii.k141_785014                         121532  0 +    130994 C
e Semnopithecus_hypoleucos.k141_761524                      11528  0 +     20762 C
e Semnopithecus_entellus.k141_1572367                        6153  0 +     15331 C
e Rhinopithecus_strykeri.ctg4                            44859307  0 -  45163003 C
e Rhinopithecus_bieti.k119_554384                            2917  0 -     17045 C
e Pygathrix_nigripes_a.k141_101123                             8537  0 +     18040 C
e Pygathrix_nigripes_b.ctg79                                 6809148  0 +   6970761 C
e Pygathrix_cinerea.k141_374971                             32651  0 +     56732 C
e Presbytis_mitrata.k141_860013                              8661  0 +     14865 C
e Presbytis_comata.k141_672698                               8546  0 -     15069 C
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000036.1               26743271  0 +  26888534 C
e Piliocolobus_kirkii.k141_929665                            4788  0 +      7694 C
e Piliocolobus_gordonorum.k141_1270531                       5421  0 -     17985 C
e Piliocolobus_badius.k141_1987485                           4802  0 -      5908 C
e Nasalis_larvatus.k141_153429                              11264  0 +     48152 C
e Colobus_polykomos.k141_1406057                            19335  0 +     23629 C
e Colobus_guereza.LG08                                  147667351  0 + 156195979 C
e Colobus_angolensis.KN985967.1                          10889423  0 +  10971483 C
e Cephalopachus_bancanus.k141_702587                        12545  0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530  0 +    345090 C
e Hoolock_leuconedys.ctg315                                   350415 278 +    431944 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               17747 40 +    209709 G----TTTTGCTAC---------------GT----T---T-T-A-TTT--TTGA-------GGTTT-aa-gaatt----a-t-t-ca
s Acinonyx_jubatus.LLWD01000356.1                         2039711 42 +   3721120 G----TTTTGCTAC-------CT------AT----T---T-T-A-ACT--GCAA-------AGGAT-AA-AGGTA----A-T-T-CA
i Acinonyx_jubatus.LLWD01000356.1                       I 5 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    117965 42 -    189883 A----TTTTACTAT-------CT------AC----T---T-T-A-TCT--TCAA-------AATCC-A-CAGAAA----A-T-T-CA
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 1 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10663672 42 +  23371972 G----TTTTGCTAC-------CT------AT----T---T-T-A-CCT--CCAG-------AGTAT-AA-AGATA----A-T-T-CA
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 5 C 0
s Ailurus_fulgens.LNAC01000003.1                          7100201 42 -  16596857 G----TTTTGCTAC-------CT------AT----T---T-T-a-cct--gaaa-------aatat-aa-agata----a-t-t-cA
i Ailurus_fulgens.LNAC01000003.1                        I 5 C 0
s Allenopithecus_nigroviridis.k141_2469532                   5620 42 -     60446 C----TTTTGCTAC---AT----------GT----T---T-T-A-TTT--TTGA-------GGTTT-AA-GAATT----A-T-T-CA
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         6337 42 -     29318 C----TTTTGCTAC---AT----------GT----T---T-T-A-TTT--TTGA-------GGTTT-AA-GAATT----A-T-T-CA
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         5275 42 +     38766 C----TTTTGCTAC---AT----------GT----T---T-T-A-TTT--TTGA-------GGTTT-AA-GAATT----A-T-T-CA
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          6231 42 -     80423 C----TTTTGCTAC---AT----------GT----T---T-T-A-TTT--TTGA-------TGTTT-AA-GAATT----A-T-T-CA
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              1214 42 +     19852 C----TTTTGCTAC---A---C-------GT----T---T-T-A-TTT--TTGA-------AGTTT-AA-GAATA----A-T-T-CA
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                3458 42 -     12443 C----TTTTGCTAC---A---C-------GT----T---T-T-A-TTT--TTGA-------AGTTT-AA-GAATA----A-T-T-CA
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                              757 42 +      5070 C----TTTTGCTAC---A---C-------GT----T---T-T-A-TTT--TTGA-------AGTTT-AA-GAATA----A-T-T-CA
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                  502 42 -      1641 C----TTTTGCTAC---A---C-------GT----T---T-T-A-TTT--TTGA-------AGTTT-AA-GAATA----A-T-T-CA
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          3241 42 -     24210 C----TTTTGCTAC---A---C-------GT----T---T-T-A-TTT--TTGA-------AGTTT-AA-GAATA----A-T-T-CA
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           29823 42 -     30219 C----TTTTGCTAC---A---C-------GT----T---T-T-A-TTT--TTGA-------AGTTT-AA-GAATA----A-T-T-CA
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_405616                              5659 42 +     16794 C----TTTTGCTAC---A---C-------GT----T---T-T-A-TTT--TTGA-------AGTTT-AA-GAATA----A-T-T-CA
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                             791 42 -      1470 C----TTTTGCTAC---A---C-------GT----T---T-T-A-TTT--TTGA-------AGTTT-AA-GAATA----A-T-T-CA
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             4936 42 -      9835 C----TTTTGCTAC---A---C-------GT----T---T-T-A-TTT--TTGA-------AGTTT-AA-GAATA----A-T-T-CA
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3525730 26 +   4113121 -----------------------------------T---T-T-A-TCT--T--G-------AGTTT-AA-AGAGg----a-t-t-ta
i Ammotragus_lervia.NIVO01013474.1                      I 7 I 26
s Anoura_caudifer.AnoCau_scaffold_422                      392765 41 -    631301 G----TTTTG-TGC-------CT------AT----T---TTT-G-CCT--TCAA-------AGTTT-AA-AGATA----A-T-T-C-
i Anoura_caudifer.AnoCau_scaffold_422                   I 5 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             3161 28 +     55446 -----------------------------------T---T-C-A-TCT--TCAA-------AGTTT-AA-AGAAG----A-T-T-TA
i Antilocapra_americana.AntAmePen_scaffold_27338        I 7 I 26
s Aotus_azarae.k141_3170768                                 66547 40 +     78111 C----TTTTGCTAC------G---------T----T---T-T-A-TTT--TTGA-------AATTT-AA-GAATA----A-T-T-CA
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            9495 40 +     22701 C----TTTTGCTAC------G---------T----T---T-T-A-TTT--TTGA-------AATTT-AA-GAATA----A-T-T-CA
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5753452 40 +   9889416 C----ttttgctac--------------a-t----t---t-t-a-ttt--ttga-------aattt-aa-gaata----a-t-t-cA
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                            10051 40 -    104377 C----TTTTGCTAC---A------------T----T---T-T-A-TTT--TTGA-------AATTT-AA-GAATA----A-T-T-CA
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                              10058 40 +     23246 C----TTTTGCTAC---A------------T----T---T-T-A-TTT--TTGA-------AATTT-AA-GAATA----A-T-T-CA
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     2592 20 +     11424 A----TTTTGCTAT---AT----------CA----T---T-T-T-TG----------------------------------------
i Aplodontia_rufa.AprRuf_scaffold_101456                I 5 I 14
s Arctocebus_calabarensis.k141_587554                        6671 42 +      9265 C----TTTTGCTAC------G-T------AT----T---T-T-A-TCT--TCAA-------GGTTT-AA-AGAAA----A-T-G-TA
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                11190 36 -     29036 G----TTTTGCTGC-------CT------AT----T---TTT-G-CCT--TTGA-------AGTTT-AA-AGA--------------
i Artibeus_jamaicensis.ArtJam_scaffold_41619            I 5 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9543344 42 +  39197703 C----TTTTGCTAC---A---C-------GT----T---T-T-A-TTT--TTGA-------AGTTT-AA-GAATA----A-T-T-CA
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             64618 42 +     85812 C----TTTTGCTAC---A---C-------GT----T---T-T-A-TTT--TTGA-------AGTTT-AA-GAATA----A-T-T-CA
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                15631 42 +     89302 C----TTTTGCTAC---A---C-------GT----T---T-T-A-TTT--TTGA-------AGTTT-AA-GAATA----A-T-T-CA
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             20132 42 -     58268 C----TTTTGCTAC---A---C-------GT----T---T-T-A-TTT--TTGA-------AGTTT-AA-GAATA----A-T-T-CA
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             68126 42 +    119057 C----TTTTGCTAC---A---C-------GT----T---T-T-A-TTT--TTGA-------AGTTT-AA-GAATA----A-T-T-CA
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              10095 42 -     25888 C----TTTTGCTAC---A---C-------GT----T---T-T-A-TTT--TTGA-------AGTTT-AA-GAATA----A-T-T-CA
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                11155 42 -     16375 C----TTTTGCTGT-------CT------AT----T---T-T-A-TCT--TCAA-------AGTTT-AA-AGATA----A-T-G-TG
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               4771 42 +      6337 C----TTTTGCTGT-------CT------AT----T---T-T-A-TCT--TCAA-------AGTTT-AA-AGATA----A-T-G-TG
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26384214 42 +  51448160 a----cttttttat-------------ctat----t---t-t-a-tct--tcaa-------AGCTT-AA-AGATA----A-T-T-CA
i Balaenoptera_acutorostrata.KI537095.1                 I 5 C 0
s Balaenoptera_bonaerensis.DF502048.1                        9387 42 -     13118 A----CTTTGCTAC-------CT------AT----T---T-T-A-TCT--TCAA-------AGTTT-AA-AGATA----A-T-T-CA
i Balaenoptera_bonaerensis.DF502048.1                   I 5 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   48192 28 -     72089 -----------------------------------T---T-T-G-TCT--TGAG-------AGTTT-AA-AGAGG----A-T-T-TA
i Beatragus_hunteri.BeaHun_scaffold_21644               I 7 I 26
s Bison_bison.KN264915.1                                   302336 28 -   6870073 -----------------------------------T---T-T-A-TCT--TCAG-------AGTTT-AA-AGAGg----a-t-t-ta
i Bison_bison.KN264915.1                                I 7 I 26
s Bos_indicus.CM003021.1                                 22956434 28 + 161108492 -----------------------------------T---T-T-A-TCT--TCAG-------AGTTT-AA-AGAGg----a-t-t-ta
i Bos_indicus.CM003021.1                                I 7 I 26
s Bos_mutus.JH883513.1                                     418699 15 +    998990 -----------------------------------T---T-T-A-TCT--TCAG-------AGTT----------------------
i Bos_mutus.JH883513.1                                  I 7 I 15
s Bos_taurus.CM000177.6                                  22665088 28 + 158972876 -----------------------------------T---T-T-A-TCT--TCAG-------AGTTT-AA-AGAGg----a-t-t-ta
i Bos_taurus.CM000177.6                                 I 7 I 26
s Bubalus_bubalis.KI419065.1                               674842 28 +   1914593 -----------------------------------T---T-T-A-TCT--TCAG-------AGTTT-AA-AGAGg----a-t-t-ta
i Bubalus_bubalis.KI419065.1                            I 7 I 26
s Cacajao_ayresi.k141_724503                               117998 42 -    171031 C----TTTGGCTAC---A------------TGC--T---T-T-A-TTT--TTGA-------AGTTT-AA-TAATA----A-T-T-CA
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 17018 42 +    125063 C----TTTGGCTAC---A------------TGC--T---T-T-A-TTT--TTGA-------AGTTT-AA-TAATA----A-T-T-CA
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                19065 42 -    216513 C----TTTGGCTAC---A------------TGC--T---T-T-A-TTT--TTGA-------AGTTT-AA-TAATA----A-T-T-CA
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       11608 42 -    134917 C----TTTGGCTAC---A------------TGC--T---T-T-A-TTT--TTGA-------AGTTT-AA-TAATA----A-T-T-CA
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3223339 21 -   8989139 G----TCTTGCTAT-------CT------AT----T---T-T-A-TCC---------------------------------------
i Camelus_bactrianus.KN276303.1                         I 5 I 14
s Camelus_dromedarius.KN271192.1                           401040 21 -  15254737 G----TCTTGCTAT-------CT------AT----T---T-T-A-TCC---------------------------------------
i Camelus_dromedarius.KN271192.1                        I 5 I 14
s Camelus_ferus.KB016973.1                                2976777 21 +   6889770 G----TCTTGCTAT-------CT------AT----T---T-T-A-TCC---------------------------------------
i Camelus_ferus.KB016973.1                              I 5 I 14
s CanFam4.chr31                                          11526549 43 +  39901454 G----TTTTTCTAC-------CT------AT----T---T-TTA-CCT--ACAA-------AGTAT-AA-AGATA----A-T-T-CA
i CanFam4.chr31                                         I 5 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   21523 43 +     87036 G----TTTTTCTAC-------CT------AT----T---T-TTA-CCT--ACAA-------AGTAT-AA-AGATA----A-T-T-CA
i Canis_lupus_VD.CanFam_VD_scaffold_16982               I 5 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11273232 43 -  35597290 G----TTTTTCTAC-------CT------AT----T---T-TTA-CCT--ACAA-------AGTAT-AA-AGATA----A-T-T-Ca
i Canis_lupus_dingo.QKWQ01001993.1                      I 5 C 0
s Canis_lupus_familiaris.chr31                           11095943 43 +  39895921 G----TTTTTCTAC-------CT------AT----T---T-TTA-CCT--ACAA-------AGTAT-AA-AGATA----A-T-T-Ca
i Canis_lupus_familiaris.chr31                          I 5 C 0
s Canis_lupus_orion.HG994411.1                           16462728 43 -  44759192 G----TTTTTCTAC-------CT------AT----T---T-TTA-CCT--ACAA-------AGTAT-AA-AGATA----A-T-T-CA
i Canis_lupus_orion.HG994411.1                          I 5 C 0
s Capra_aegagrus.CM003214.1                              21333672 28 + 157394656 -----------------------------------T---T-T-A-TCT--CCAG-------AGTTT-AA-AGAGg----a-t-t-ta
i Capra_aegagrus.CM003214.1                             I 7 I 26
s Capra_hircus.CM004562.1                               135712027 28 - 157403528 -----------------------------------T---T-T-A-TCT--CCAG-------AGTTT-AA-AGAGG----a-t-t-ta
i Capra_hircus.CM004562.1                               I 7 I 26
s Capromys_pilorides.CapPil_scaffold_529800                   413 41 -      2320 G----TCTTGCTGC---A---C-------AT----T---T-T-A-TTT--TCAA-------AGTTT-A--AGACA----A-T-T-TG
i Capromys_pilorides.CapPil_scaffold_529800             I 4 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               62183 43 +     67245 G----TTTGGCTGC-------CT------AT----T---TTT-G-CCT--TCAA-------AGTTT-AA-AGATA----A-C-TTT-
i Carollia_perspicillata.CarPer_scaffold_4436           I 5 C 0
s Castor_canadensis.CasCan_scaffold_1326                      178 42 -    202837 G----TTTTGATAT---A---C-------AT----T---T-T-A-ACT--TAAA-------AGCTTGA--AAATA----A-T-T-CA
i Castor_canadensis.CasCan_scaffold_1326                N 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   162855 43 -    276539 A----TTTTGGGACTT-------------AA----T---T-T-A-TCT--TGAA-------AGTTT-AA-AGATA----A-TTT-CA
i Catagonus_wagneri.CatWag_scaffold_1305                I 5 C 0
s Cavia_aperea.AVPZ01000278.1                            15789880 39 -  24422027 G----GC-TGCTAC---A-A---------AT----T---T-A-A-TCt--gcaa-------atttt-a--atata----a-t-t-t-
i Cavia_aperea.AVPZ01000278.1                           I 3 I 1
s Cavia_porcellus.DS562889.1                             15801819 39 -  24440124 G----GC-TGCTAC---A-A---------AT----T---T-A-A-TCt--gcaa-------atttt-a--atata----a-t-t-t-
i Cavia_porcellus.DS562889.1                            I 3 I 1
s Cavia_tschudii.CavTsc_scaffold_488                       179991 39 +    436027 G----GC-TGCTAC---A-A---------AT----T---T-A-A-TCT--GCAA-------ATTTT-A--ATATA----A-T-T-T-
i Cavia_tschudii.CavTsc_scaffold_488                    I 3 I 1
s Cebus_albifrons.Contig22                               18895720 42 -  29618158 C----TTTTGTTAC---AT----------GT----T---T-T-A-TTT--TTGA-------AATTT-AA-GAATA----A-T-T-CA
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                12370 42 -     26817 C----TTTTGTTAC---AT----------GT----T---T-T-A-TTT--TTGA-------AATTT-AA-GAATA----A-T-T-CA
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                16614 42 +     25043 C----TTTTGTTAC---AT----------GT----T---T-T-A-TTT--TTGA-------AATTT-AA-GAATA----A-T-T-CA
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4367784 42 +   7569818 G----TTTTGTAAC-------CT------AT----T---T-T-A-CCT--TTGA-------AGTTT-Aa-agata----a-t-t-ca
i Ceratotherium_simum.JH767818.1                        I 5 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         7541 42 -      9338 A----TTTTGTAAC-------CT------AT----T---T-T-A-CCT--TTGA-------AGTTT-AA-AGATA----A-T-T-CA
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    I 5 C 0
s Cercocebus_atys.KQ010443.1                              6559561 42 +   6739814 C----TTTTgctac-------------atgt----t---t-t-a-ttt--ttga-------ggttt-aA-GAATT----A-T-T-CA
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      31038 42 +     60454 C----TTTTGCTAC---AT----------GT----T---T-T-A-TTT--TTGA-------GGTTT-AA-GAATT----A-T-T-CA
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          6242 42 -     21101 C----TTTTGCTAC---AT----------GT----T---T-T-A-TTT--TTGA-------GGTTT-AA-GAATT----A-T-T-CA
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         63552 42 -    107033 C----TTTTGCTAC---AT----------GT----T---T-T-A-TTT--TTGA-------GGTTT-AA-GAATT----A-T-T-CA
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        6415 42 -     17608 C----TTTTGCTAC---AT----------GT----T---T-T-A-TTT--TTGA-------GGTTT-AA-GAATT----A-T-T-CA
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          3580 42 +     45019 C----TTTTGCTAC---AT----------GT----T---T-T-A-TTT--TTGA-------GGTTT-AA-GAATT----A-T-T-CA
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           3856 42 +     15177 C----TTTTGCTAC---AT----------GT----T---T-T-A-TTT--TTCA-------GGTTT-AA-GAATT----A-T-T-CA
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          6462 42 +     16677 C----TTTTGCTAC---AT----------GT----T---T-T-A-TTT--TTGA-------GGTTT-AA-GAATT----A-T-T-CA
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           28652 42 +     35983 C----TTTTGCTAC---AT----------GT----T---T-T-A-TTT--TTGA-------GGTTT-AA-GAATT----A-T-T-CA
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11995183 42 +  12117833 C----TTTTGCTAC---AT----------GT----T---T-T-A-TTT--TTGA-------GGTTT-AA-GAAGT----A-T-T-CG
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46482159 42 +  46592721 C----TTTTGCTAC---AT----------GT----T---T-T-A-TTT--TTGA-------GGTTT-AA-GAATT----A-T-T-CA
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                        276 42 -     27215 C----TTTTGCTAC---AT----------GT----T---T-T-A-TTT--TTGA-------GGTTT-AA-GAATT----A-T-T-CA
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       6476 42 +     35577 C----TTTTGCTAC---AT----------GT----T---T-T-A-TTT--TTGA-------GGTTT-AA-GAATT----A-T-T-CG
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        6270 42 -     25661 C----TTTTGCTAC---AT----------GT----T---T-T-A-TTT--TTGA-------GGTTT-AA-GAATT----A-T-T-CA
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        6442 42 -     17744 C----TTTTGCTAC---AT----------GT----T---T-T-A-TTT--TTGA-------GGTTT-AA-GAATT----A-T-T-CA
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        25811 42 +     37128 C----TTTTGCTAC---AT----------GT----T---T-T-A-TTT--TTGA-------GGTTT-AA-GAATT----A-T-T-CA
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           4776 40 -      6963 G----TTTTGTTAC---AT-----------T----T---T-T-A-CCT--TCAA-------AGTTT-AA-AGATA----A-T-T-C-
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      I 5 C 0
s Cheirogaleus_major.k141_1157592                           63364 42 -     68416 C----TTTTGCTAC---AT----------AT----T---T-T-A-CCT--TCGA-------AGATT-AA-AGATA----A-T-A-TA
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                           12484 42 +     13308 C----TTTTGCTAC---AT----------AT----T---T-T-A-CCT--TCGA-------AGATT-AA-AGATA----A-T-G-TA
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             9657 42 -     18223 C----TTTGGCTAC---A------------T--GTT---T-T-A-TTT--TTGA-------AGTTT-AA-GAGTA----A-T-T-CA
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              1395 42 +    188999 C----TTTGGCTAC---A------------T--GTT---T-T-A-TTT--TTGA-------AGTTT-AA-GAGTA----A-T-T-CA
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           45694 42 +     57117 C----TTTGGCTAC---A------------T--GTT---T-T-A-TTT--TTGA-------AGTTT-AA-GAGTA----A-T-T-CA
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          50374 42 +     54541 C----TTTGGCTAC---A------------T--GTT---T-T-A-TTT--TTGA-------AGTTT-AA-GAGTA----A-T-T-CA
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15964566 41 +  43084221 G----ATTtactac-------------acat----t---t-t-a-ttt--tcaa-------agttt-a--agata----a-t-t-ta
i Chinchilla_lanigera.JH721867.1                        I 4 C 0
s Chiropotes_israelita.k141_1189915                         75177 42 +    196370 C----TTTGGCTAC---AT-G---------T----T---T-T-A-TTT--TTGA-------AGTTT-AA-TGGTA----A-T-T-CA
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          19358 42 +     40510 C----TTTGGCTAC---AT-G---------T----T---T-T-A-TTT--TTGA-------AGTTT-AA-TGGTA----A-T-T-CA
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15143996 42 -  15256731 C----TTTTGCTAC---AT----------GT----T---T-T-A-TTT--TTGA-------GGTTT-AA-GAATT----A-T-T-CA
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      38460 42 -     53260 C----TTTTGCTAC---AT----------GT----T---T-T-A-TTT--TTGA-------GGTTT-AA-GAATT----A-T-T-CA
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101149019 42 + 101219884 C----TTTTgctac-------------atgt----t---t-t-a-ttt--ttga-------ggttt-aA-GAATT----A-T-T-CA
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                18886 41 -     21363 G----TTTTGCTAC-------CT------AT----T---T-T-A-CCT--TCAA-------AGGTT-AA-AGATA----A-A-T-C-
i Choloepus_didactylus.ChoDid_scaffold_36182            I 5 C 0
s Choloepus_hoffmanni.KN194586.1                           764190 41 +    964067 G----TTTTGCTAC-------CT------AT----T---T-T-A-CCT--TCAA-------AGGTT-AA-AGATA----A-A-T-C-
i Choloepus_hoffmanni.KN194586.1                        I 5 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_629495              2428 32 -      3120 G----CTTTACT-----------------CTA---TAGTT-T-A-TCT--TCAA-------AGTTT-AA------------------
i Chrysochloris_asiatica.ChrAsi_scaffold_629495         I 7 I 7
s Condylura_cristata.JH655880.1                          60622373 33 +  78930452 g----tttttctat-------------atat----t---t-t-c-cct--tcaa-------aattt-aa-a----------------
i Condylura_cristata.JH655880.1                         I 5 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         2712 41 -      5782 G----TTTTGTTAC-------CT------AT----T---T-T-A-CT---TCAA-------AGTTT-AA-AGCTA----A-C-T-CA
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    I 5 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 282851 42 -    399297 A----TTTTATTAT------G-T------AC----T---T-T-A-TCT--TCAA-------AATTC-A-CAGATA----A-T-T-CA
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53035221 20 +  72327488 A----TTTCACTAG------G-T------AC----T---T-T-A-TC----------------------------------------
i Cricetulus_griseus.LT883672.1                         I 1 I 9
s Crocidura_indochinensis.CroInd_scaffold_27484              2286 43 -     22648 A----TCTTGATAC-------CT------AT----T---T-T-A-CCCAGGAAA-------ATG-T-AA-AAATA----A-T-T-TG
i Crocidura_indochinensis.CroInd_scaffold_27484         I 5 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            57697 42 -     70449 G----TTTTGCTAC-------CT------AT----T---T-T-A-ACT--GCAA-------AGTAT-AA-AGATA----A-T-T-CA
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 5 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  214463 41 -    956709 G----GTTTGGTTC---A---C--------T----T---T-T-A-TCT--TCAG-------AGTTC-A-AAGGCA----A-T-T-CA
i Ctenodactylus_gundi.CteGun_scaffold_447               I 1 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 34533 41 -     67205 G----GCATGCTGA---A---C-------AT----T---T-T-A-TTT--TCAA-------AGTTT-A--AGACA----A-T-T-TA
i Ctenomys_sociabilis.CteSoc_scaffold_19489             I 4 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                21054 41 +     26546 T----GTTTGCTAC---A---C-------AT----T---T-A-A-TCT--TCAA-------AGTTT-A--AGGTA----A-T-T-TA
i Cuniculus_paca.CunPac_flattened_line_16637            I 4 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             62193 41 -    236241 C----GTTTACTAC---AT----------AT----T---T-A-G-TCT--TCAA-------AGTTT-A--AGATA----A-T-T-TA
i Dasyprocta_punctata.DasPun_flattened_line_634         I 4 C 0
s Dasypus_novemcinctus.JH568778.1                          185857 39 -   6883506 G----TTTTGGT-C---AT-----------T----T---T-T-A-CCT--CCAA-------AGTTT-AA-AGATA----A-G-T-T-
i Dasypus_novemcinctus.JH568778.1                       I 5 C 0
s Daubentonia_madagascariensis.ctg11                     16849315 42 +  31942871 C----TTTTGCTAC---AT----------AT----T---T-T-A-TCT--TCAA-------AGCTT-AA-AGATA----A-T-G-TA
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80040837 38 -  96802777 A----CTTTGCT-----------------AT----T---T-T-A-TCT--TCAA-------AGTTT-AA-Agata----a-t-t-aa
i Delphinapterus_leucas.KZ290064.1                      I 5 C 0
s Desmodus_rotundus.KZ672188.1                           18701398 42 -  18957592 G----TTTTGCTGCTT-------------AT----T---T-C-a-cct--tcaa-------aattt-aa-aaata----a-t-t-ca
i Desmodus_rotundus.KZ672188.1                          I 5 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 326433 42 +    993696 G----TTTTGTAAC-------CT------AT----T---T-T-A-CCT--TTGA-------AGTTT-Aa-agata----a-t-t-ca
i Dicerorhinus_sumatrensis.PEKH010003161.1              I 5 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   7072 42 +    151128 G----TTTTGTAAC-------CT------AT----T---T-T-A-CCT--TTGA-------AGTTT-AA-AGATA----A-C-T-CA
i Diceros_bicornis.DicBicMic_scaffold_9545              I 5 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   159827 41 +    228994 G----ATTTTCTAC---A---C-------AT----T---T-T-A-TTT--TCAA-------AGTTT-A--AGATA----A-T-T-TA
i Dinomys_branickii.DinBra_scaffold_1996                I 4 C 0
s Dipodomys_ordii.KN672545.1                              3660545 42 +   4240102 T----TTTTGGTAC---A-A---------AT----T---C-T-G-TAT--TTAA-------AGTTC-A-AAGGTG----A-T-T-CA
i Dipodomys_ordii.KN672545.1                            I 6 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  2899 42 -     11986 T----TTTTGGTAC---A-A---------AT----T---C-T-G-TAT--TTAA-------AGTTC-A-AAGGTG----A-T-T-CA
i Dipodomys_stephensi.DipSte_scaffold_84338             I 6 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                40777 39 -     73477 G----GC-TACTCT---A-A---------AT----T---T-A-A-TCT--TCAA-------GTTTT-A--AGATA----A-T-T-T-
i Dolichotis_patagonum.DolPat_scaffold_14102            I 4 I 1
s Echinops_telfairi.JH980316.1                           23000095 30 -  44670279 G----CTTTCCT-----------------ATA---T---T-T-TACCT--TAAG-------GTTTT-AA------------------
i Echinops_telfairi.JH980316.1                          I 7 I 7
s Elaphurus_davidianus.JRFZ01086400.1                     1496408 28 +   1727528 -----------------------------------T---T-T-A-TCT--TCAA-------AGTTT-AA-AGAGG----A-T-T-TA
i Elaphurus_davidianus.JRFZ01086400.1                   I 7 I 26
s Elephantulus_edwardii.JH947210.1                        7833151 32 +  15467074 G----TATTATT-----------------GTACATT---T-T-A-CCT--TTGA-------atgtt-ga------------------
i Elephantulus_edwardii.JH947210.1                      I 7 I 7
s Ellobius_lutescens.LOEQ01003611.1                        244019 20 -    369425 A----TATTACTT-TTT------------AC----T---T-T-A-TC----------------------------------------
i Ellobius_lutescens.LOEQ01003611.1                     I 1 I 18
s Enhydra_lutris.KZ291749.1                              85877680 26 +  99434291 -----------------------------------------T-A-CCT--GCAA-------AGTAT-AA-AGATA----A-T-T-CA
i Enhydra_lutris.KZ291749.1                             I 20 C 0
s Eptesicus_fuscus.JH977687.1                             4709154 42 +   6522550 G----TTTCGCTAC-------C-----C-AT----T---T-C-A-CCT--TCAA-------AGTTT-AA-AGATA----A-T-T-CA
i Eptesicus_fuscus.JH977687.1                           I 5 C 0
s Erinaceus_europaeus.JH835290.1                         11541499 48 +  16010500 G----TTTTCATAC---A---C-------AC----T---T-T-A-CCT--TCAAGgtataaaga-t-aa-atata----t-a-t-ct
i Erinaceus_europaeus.JH835290.1                        I 5 C 0
s Erythrocebus_patas.Contig8                             48781029 42 -  48907691 C----TTTTGCTAC---AT----------GT----T---T-T-A-TTT--TTGA-------GGTTT-AA-GAATT----A-T-T-CA
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          319057 42 +    330699 A----CTTTGCTAC-------CT------AT----T---T-T-A-TCT--TCAA-------AGTTT-AA-AGATA----A-T-T-CA
i Eschrichtius_robustus.EscRob_flattened_line_685       I 5 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             65514 42 +     89355 A----CTTTGCTAC-------CT------AT----T---T-T-A-TCT--TCAA-------AGTTT-AA-AGATA----A-T-T-CA
i Eubalaena_japonica.EubJap_flattened_line_7756         I 5 C 0
s Eulemur_albifrons.k141_715837                              9468 42 +     13586 C----TTTTGCTAC---AT----------AT----T---T-T-A-TCT--TCGA-------AGATT-AA-AGATA----A-T-G-CA
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_1015201                              2730 42 -      4292 C----TTTTGCTAC---AT----------AT----T---T-T-A-TCT--TCGA-------AGATT-AA-AGATA----A-T-G-CA
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            15864 42 +     36558 C----TTTTGCTAC---AT----------AT----T---T-T-A-TCT--TCAA-------AGATT-AA-AGATA----A-T-G-CA
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            12189 42 +     60246 C----TTTTGCTAC---AT----------AT----T---T-T-A-TCT--TCGA-------AGATT-AA-AGATA----A-T-G-CA
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                15671 42 +    109717 C----TTTTGCTAC---AT----------AT----T---T-T-A-TCT--TTGA-------AGATT-AA-AGATA----A-T-G-CA
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 3657 42 -     19505 C----TTTTGCTAC---AT----------AT----T---T-T-A-TCT--TCGA-------AGATT-AA-AGATA----A-T-G-CA
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                20329 42 +     27497 C----TTTTGCTAC---AT----------AT----T---T-T-A-TCT--TCGA-------AGATT-AA-AGATA----A-T-G-CA
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           22785 42 +     26808 C----TTTTGCTAC---AT----------AT----T---T-T-A-TCT--TCGA-------AGATT-AA-AGATA----A-T-G-CA
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                37520 42 +     46535 C----TTTTGCTAC---AT----------AT----T---T-T-A-TCT--TCGA-------AGATT-AA-AGATA----A-T-G-CA
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              20258 42 -     29447 C----TTTTGCTAC---AT----------AT----T---T-T-A-TCT--TCGA-------AGATT-AA-AGATA----A-T-G-CA
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129899131 42 - 159252932 G----TTTTGCTAC-------CT------AT----T---T-T-A-ACT--GCAA-------AGGAT-AA-AGGTA----A-T-T-CA
i Felis_catus.CM001386.2                                I 5 C 0
s Felis_catus_fca126.CM031420.1                         129286106 42 - 158578461 G----TTTTGCTAC-------CT------AT----T---T-T-A-ACT--GCAA-------AGGAT-AA-AGGTA----A-T-T-CA
i Felis_catus_fca126.CM031420.1                         I 5 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 27205 42 +     52776 G----TTTTGCTAC-------CT------AT----T---T-T-A-ACT--GCAA-------AGGAT-AA-AGGTA----A-T-T-CA
i Felis_nigripes.FelNig_flattened_line_8080             I 5 C 0
s Fukomys_damarensis.KN123630.1                          13896338 41 -  19261668 G----TTTTGTTGC---A---C-------AT----T---T-T-A-ACT--TGAA-------AGTTT-A--AGAGA----A-T-G-TA
i Fukomys_damarensis.KN123630.1                         I 2 C 0
s Galago_moholi.ctg555                                     215518 42 -    847004 C----TTTTGCTAT------G-T------AT----T---T-T-A-TCT--TTAA-------GGCTT-AA-AGATA----A-T-G-TA
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           17879 42 -     43889 C----TTTTGCTAT------G-T------AT----T---T-T-A-TCT--TTAA-------GGCTT-AA-AGATA----A-T-G-TA
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          15023 42 +     27357 C----TTTTGCTAT------G-T------AT----T---T-T-A-TCT--TCAA-------GGCTT-AA-AGATA----A-T-G-TA
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               159772 42 +    324696 G----TTTTGCTAC-------CT------AT----T---T-T-A-TGT--TTGA-------AGTTT-AA-AGACA----A-T-T-CA
i Galeopterus_variegatus.GalVar_scaffold_354            I 4 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    186200 26 -    189561 -----------------------------------------T-A-TCT--TCAA-------AGTTT-AA-AGAGG----A-T-T-TA
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 1 I 26
s Glis_glis.GliGli_scaffold_79770                           16668 20 -     18683 C----TTTAGCTAC-------C-----C-AT----T---T-T-A-TC----------------------------------------
i Glis_glis.GliGli_scaffold_79770                       I 5 I 14
s Gorilla_beringei.k141_111300                               9444 42 -     14630 C----TTTTGCTAC------G-T------GT----T---T-T-A-TTT--TTGA-------GGTTT-AA-GAATT----A-T-T-CA
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119656544 42 - 195582420 C----TTTTGCTAc-------------gtgt----t---t-t-a-ttt--ttga-------ggttt-aA-GAATT----A-T-T-CA
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   79982 24 +    118900 CTTTCTTTAACTAC---A---C-------AT----T---T-T-A-TA----------------------------------------
i Graphiurus_murinus.GraMur_scaffold_4493               I 5 I 14
s Hapalemur_alaotrensis.k141_1280836                         6251 42 +     10286 C----TTTTACTAC---A---C-------AT----T---T-T-A-TCT--TTGA-------AGATT-AA-AGATA----A-T-G-CA
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             4729 42 -     11661 C----TTTTACTAC---A---C-------AT----T---T-T-A-TCT--TTGA-------AGATT-AA-AGATA----A-T-G-CA
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                            10056 42 +     56096 C----TTTTACTAC---A---C-------AT----T---T-T-A-TCT--TTGA-------AGATT-AA-AGATA----A-T-G-CA
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        33305 42 -     42470 C----TTTTACTAC---A---C-------AT----T---T-T-A-TCT--TTGA-------AGATT-AA-AGATA----A-T-G-CA
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        49928 42 -     54384 C----TTTTACTAT---A---C-------AT----T---T-T-A-TCT--TTGA-------AGATT-AA-AGATA----A-T-G-CA
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              22835 42 +     53719 G----TTTTCCTGT-------CT------AT----T---T-T-A-ACT--GCGA-------AGTAT-AA-AGATA----A-T-T-CA
i Helogale_parvula.HelPar_flattened_line_22962          I 5 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                33077 28 -     91191 -----------------------------------T---T-T-A-TCT--TCAG-------AGTTT-AA-AGAGG----A-T-T-TA
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 7 I 26
s Heterocephalus_glaber.JH602058.1                        2560832 41 +  31725842 G----TTTTGATAC---A---C-------AT----T---T-T-A-CCT--TTAA-------AGTTC-A--AGATA----A-C-T-TA
i Heterocephalus_glaber.JH602058.1                      I 5 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               63058 42 +     73687 G----TTCTACT-----------------GTATAGT---C-T-A-CCT--TTAA-------ATTTT-AA-AGACA----G-T-T-CA
i Heterohyrax_brucei.HetBruBak_scaffold_25354           I 2 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              150839 42 +    277961 A----TTTTGCTAC-------CT------AT----T---T-T-A-TCT--TCAA-------AGTTT-AA-AGATA----A-T-T-CT
i Hippopotamus_amphibius.HipAmp_scaffold_1308           I 5 C 0
s Hipposideros_armiger.JXIK01001052.1                      277328 42 -    479840 G----TTTTTCTAC-------CT------AT----T---T-T-A-CTT--TCAA-------agttt-aa-agata----a-t-t-at
i Hipposideros_armiger.JXIK01001052.1                   I 26 I 152
s Hipposideros_galeritus.HipGal_scaffold_7653                5800 42 +     86108 G----TTTTTCTAC-------CT------AT----T---T-T-A-CTT--CCAA-------AATTT-AA-AGATA----A-T-T-CA
i Hipposideros_galeritus.HipGal_scaffold_7653           I 20 C 0
s Hoolock_leuconedys.ctg649                                   108968  1 +    115816 --------------------------------------------------------------------------------------A
i Hoolock_leuconedys.ctg649                                I 35 I 175
s Hyaena_hyaena.HyaHya_flattened_line_20729                 23307 42 -     67322 G----TTTTGCTAC-------CT------AT----T---T-T-A-ACT--GCAA-------AGTAA-AA-AGAGA----A-T-T-CA
i Hyaena_hyaena.HyaHya_flattened_line_20729             I 5 C 0
s Hylobates_abbotti.k141_1816750                             1797  1 +      3202 --------------------------------------------------------------------------------------A
i Hylobates_abbotti.k141_1816750                        C 0 I 174
s Hylobates_agilis.k141_1633646                              1767  1 -      2102 --------------------------------------------------------------------------------------A
i Hylobates_agilis.k141_1633646                         C 0 I 174
s Hylobates_klossii.k141_468230                              3284  1 +      5464 --------------------------------------------------------------------------------------A
i Hylobates_klossii.k141_468230                         C 0 I 175
s Hylobates_pileatus_b.ContigUN                                 14628631  1 -  25970782 --------------------------------------------------------------------------------------A
i Hylobates_pileatus_b.ContigUN                                C 0 I 175
s Hylobates_muelleri.k141_1139146                            1183  1 +      4161 --------------------------------------------------------------------------------------A
i Hylobates_muelleri.k141_1139146                       C 0 I 175
s Hylobates_pileatus_a.tarseq_592                             37493  1 -     60944 --------------------------------------------------------------------------------------A
i Hylobates_pileatus_a.tarseq_592                         C 0 I 175
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           21445 40 -    119109 G----CC-TGCTAC---A-A---------AT----T---T-A-A-TCT--TCAA-------ATTTT-A--GCATA----ACT-T-T-
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       I 4 I 1
s Hystrix_cristata.HysCri_scaffold_50788                     9734 41 +     22540 G----CTTTGCCAC---A---C-------AT----T---T-A-A-GCT--TCAA-------AGTTT-A--GGATA----A-T-T-TA
i Hystrix_cristata.HysCri_scaffold_50788                I 3 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7130576 15 +  13083262 C----TTTtgctac-------------atat----t---------------------------------------------------
i Ictidomys_tridecemlineatus.JH393315.1                 I 5 I 18
s Indri_indri.k141_2197838                                   1775 42 +      3484 C----TTTTGCTAC---AT----------AT----T---T-T-A-TCT--TCAA-------AGTTT-AA-AGATA----A-T-G-TA
i Indri_indri.k141_2197838                              C 0 I 2
s Inia_geoffrensis.IniGeo_flattened_line_66725              13049 38 +     17520 A----CTTTGCT-----------------AT----T---T-T-A-TCT--TCAA-------AGTTT-AA-AGATA----A-T-T-AA
i Inia_geoffrensis.IniGeo_flattened_line_66725          I 5 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               27668 38 +     37189 A----CTTTGCT-----------------AT----T---T-T-A-TCC--TCAA-------AGTTT-AA-AGATA----A-T-T-CA
i Kogia_breviceps.KogBre_flattened_line_35920           I 5 C 0
s Lagothrix_lagothricha.k141_12968                          54213 42 -    147782 C----TTTTGCTAC---A---C-------AT----T---T-T-A-TTT--TTGA-------AGTTT-AA-GAATA----A-T-T-CA
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    5766 42 +     26176 G----TTTTGCTAA-------C-----C-AT----T---T-C-A-CCT--TCAA-------AGTTT-AA-AGATA----A-T-T-CA
i Lasiurus_borealis.LasBor_scaffold_59542               I 5 C 0
s Lemur_catta.scaffold_1                                258411603 42 - 285822530 C----TTTTACTAC---A---C-------AT----T---T-T-A-TCT--TTGA-------AGATT-AA-AGACA----A-T-G-CA
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        28917 42 +     39228 C----ATTTGCTAT---AT----------AT----T---T-T-A-TCT--TTGA-------AGTTT-AA-AGATA----A-A-G-TA
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            58281 42 +     63517 C----ATTTGCTAT---AT----------AT----T---T-T-A-TCT--TTGA-------AGTTT-AA-AGATA----A-A-G-TA
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        36661 42 -     38897 C----ATTTGCTAT---AT----------AT----T---T-T-A-TCT--TTGA-------AGTTT-AA-AGATA----A-A-G-TA
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      2707 42 -     13103 C----ATTTGCTAT---AT----------AT----T---T-T-A-TCT--TTGA-------AGTTT-AA-AGATA----A-A-G-TA
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3091641 42 -   3498232 G----TTTTGCTAC-------CT------AT----T---T-T-A-CCT--ACAG-------AATAT-AC-AGATG----A-C-T-CA
i Leptonychotes_weddellii.KB714749.1                    I 5 C 0
s Lepus_americanus.LepAme_scaffold_62849                    21070 41 +     22452 -----TTCAGCTAC---A-A---------AT----T---T-T-A-CCT--TTAA-------AGTTT-AA-GAATA----A-T-T-CA
i Lepus_americanus.LepAme_scaffold_62849                I 1 C 0
s Lipotes_vexillifer.KE558548.1                            139983 38 +   3060487 A----CTTTGCT-----------------AT----T---T-T-A-TCT--TCAA-------AGTTT-AA-AGata----a-t-t-aa
i Lipotes_vexillifer.KE558548.1                         I 5 C 0
s Lophocebus_aterrimus.ctg55                             19252650 42 +  19376315 C----TTTTGCTAC---AT----------GT----T---T-T-A-TTT--TTGA-------GGTTT-AA-GAATT----A-T-T-CA
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           15468 55 +     84689 C----TTTTGCTACTTTATAGCTTTTGCTAT----T---T-T-A-TCT--TCAA-------GGCTT-AA-AGATA----A-T-G-TA
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3783207 55 +   6799190 C----TTTTGCTACTTTATAGCTTTTGCTAT----T---T-T-A-TCT--TCAA-------GGCTT-AA-AGATA----A-T-G-TA
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20598984 38 -  62548349 G----TTTTACT-----------------GT----T---T-T-A-TCT--TCAA-------ATTTT-AA-AGaca----a-t-t-ca
i Loxodonta_africana.GL010040.1                         I 2 C 0
s Lycaon_pictus.CM007556.1                               11095399 43 +  39895028 G----TTTTTCTAC-------CT------AT----T---T-TTA-CCT--ACAA-------AGTAT-AA-AGATA----A-T-T-Ca
i Lycaon_pictus.CM007556.1                              I 5 C 0
s Macaca_arctoides.k141_2201161                             24401 42 +     74745 C----TTTTGCTAC---AT----------GT----T---T-T-A-TTT--TTGA-------GGTTT-AA-GAATT----A-T-T-CA
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12710862 42 +  12821369 C----TTTTGCTAC---AT----------GT----T---T-T-A-TTT--TTGA-------GGTTT-AA-GAATT----A-T-T-CA
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                3435 42 -     26467 C----TTTTGCTAC---AT----------GT----T---T-T-A-TTT--TTGA-------GGTTT-AA-GAATT----A-T-T-CA
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           51306 42 +     63263 C----TTTTGCTAC------G-T------GT----T---T-T-A-TTT--TTGA-------GGTTT-AA-GAATT----A-T-T-CA
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 3416 42 -     26361 C----TTTTGCTAC---AT----------GT----T---T-T-A-TTT--TTGA-------GGTTT-AA-GAATT----A-T-T-CA
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 6606 42 -      7381 C----TTTTGCTAC---AT----------GT----T---T-T-A-TTT--TTGA-------GGTTT-AA-GAATT----A-T-T-CA
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  49835 42 -     79256 C----TTTTGCTAC---AT----------GT----T---T-T-A-TTT--TTGA-------GGTTT-AA-GAATT----A-T-T-CA
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196039933 42 + 196197964 C----TTTTgctac-------------atgt----t---t-t-a-ttt--ttga-------ggttt-aA-GAATT----A-T-T-CA
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11450103 42 +  11645122 C----TTTTgctac-------------atgt----t---t-t-a-ttt--ttga-------ggttt-aa-gaatt----a-t-t-ca
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   8789 42 -     46448 C----TTTTGCTAC---AT----------GT----T---T-T-A-TTT--TTGA-------GGTTT-AA-GAATT----A-T-T-CA
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                6452 42 -     13212 C----TTTTGCTAC---AT----------GT----T---T-T-A-TTT--TTGA-------GGTTT-AA-GAATT----A-T-T-CA
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 20132 42 -     55006 C----TTTTGCTAC---AT----------GT----T---T-T-A-TTT--TTGA-------GGTTT-AA-GAATT----A-T-T-CA
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43845247 42 +  43892939 C----TTTTGCTAC---AT----------GT----T---T-T-A-TTT--TTGA-------GGTTT-AA-GAATT----A-T-T-CA
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               21416 42 -     24607 C----TTTTGCTAC---AT----------GT----T---T-T-A-TTT--TTGA-------GGTTT-AA-GAATT----A-T-T-CA
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               8786 42 -     27140 C----TTTTGCTAC---AT----------GT----T---T-T-A-TTT--TTGA-------GGTTT-AA-GAATT----A-T-T-CA
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43441822 42 -  43563597 C----TTTTGCTAC---AT----------GT----T---T-T-A-TTT--TTGA-------GGTTT-AA-GAATT----A-T-T-CA
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4454626 42 -   4543643 C----TTTTGCTAC---AT----------GT----T---T-T-A-TTT--TTGA-------GGTTT-AA-GAATT----A-T-T-CA
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            152361 42 +    252755 G----TTTTGCTAC-------CT------TT----T---T-T-A-CCT--TTGC-------AGTTT-AA-AGTTA----A-C-A-GA
i Manis_javanica.JSZB01003966.1                         I 5 C 0
s Manis_pentadactyla.KN017078.1                             39951 42 +     58827 G----TTTTGCTAC-------CT------TT----T---T-T-A-CCT--TTGC-------AGTTT-AA-AGTTA----A-T-A-GA
i Manis_pentadactyla.KN017078.1                         I 5 C 0
s Marmota_marmota.CZRN01000005.1                         36878448 15 +  64221397 C----TTTTGCtac-------------acat----t---------------------------------------------------
i Marmota_marmota.CZRN01000005.1                        I 5 I 18
s Megaderma_lyra.MegLyr_scaffold_3562                       65794 42 -    234502 G----TTTGGCTGC-------CT------AG----T---T-T-G-CTT--TCAA-------AGTCT-AA-AGGCA----A-T-T-CA
i Megaderma_lyra.MegLyr_scaffold_3562                   I 5 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             6572 26 -     87323 -----------------------------------------T-A-CCT--GCAA-------AGTAT-AA-AGATA----A-T-T-CA
i Mellivora_capensis.MelCap_flattened_line_15433        I 20 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 1467 42 +    115071 A----TTTTACTAT------G-T------AC----T---T-T-A-TCT--TCAT-------AATTC-A-CAAAAA----A-T-T-CA
i Meriones_unguiculatus.MerUng_scaffold_9483            I 1 C 0
s Mesocricetus_auratus.KB708139.1                         1051760 18 -  26018355 -----------------------------------------------------A-------AATTC-A-CAGATA----A-T-T-CA
i Mesocricetus_auratus.KB708139.1                       I 21 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    2640 38 -     12939 A----CTTTGCT-----------------AC----T---T-T-A-TCT--TCAA-------AGTTT-AA-AGATA----A-T-T-CA
i Mesoplodon_bidens.MesBid_scaffold_96348               I 5 C 0
s Microcebus_murinus.CM007691.1                          16514635 42 +  47401472 C----GTTTGTTAC---AT----------AT----T---T-T-A-Cct--ttga-------agatt-aa-aaata----a-t-g-ta
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  41655 29 -     48017 A----CCTTACT-----------------ATA---T---T-T-T-CCT--ACAA-------GCTTT-AA------------------
i Microgale_talazaci.MicTal_scaffold_34660              I 7 I 7
s Micronycteris_hirsuta.MicHir_scaffold_37978               25161 26 -     32043 -----------------------------------------T-A-CCT--CCAA-------AGTTT-AA-AGATA----A-T-T-CA
i Micronycteris_hirsuta.MicHir_scaffold_37978           I 21 C 0
s Microtus_ochrogaster.CM001673.1                        22824836 18 -  98408828 -----------------------------------------------------a-------GATTC-A-CAGATA----A-T-T-CA
i Microtus_ochrogaster.CM001673.1                       I 20 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8213200 44 +  10048721 T----TTTTGCTAC-------CTT----AAT----T---T-T-A-CCT--TCAA-------AGTTT-AA-AGATA----A-T-T-CA
i Miniopterus_natalensis.LDJU01000022.1                 I 2 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            37689 44 +     45743 T----TTTTGCTAC-------CTT----AAT----T---T-T-A-CCT--TCAA-------AGTTT-AA-AGATA----A-T-T-CA
i Miniopterus_schreibersii.MinSch_scaffold_24116        I 2 C 0
s Miopithecus_ogouensis.k141_2935907                         6368 42 +     29742 C----TTTTGCTAC---AT----------GT----T---T-T-A-TTT--TTGA-------GGTTT-AA-GAATT----A-T-T-CA
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        17137 42 -    104932 G----TTTTGCTAC-------CT------AT----T---T-T-A-CCT--ACAG-------AATAT-AC-AGATA----A-C-T-CA
i Mirounga_angustirostris.MirAng_flattened_line_8852    I 5 C 0
s Mirza_zaza.k141_593947                                     5318 42 -     12809 C----GTTTGCTAC---AT----------AT----T---T-T-A-CCT--TTGA-------AGATT-AA-AAATA----A-T-G-TA
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 150430 38 +    154973 A----CTTTGAT-----------------AT----T---T-T-A-TCT--TCAA-------AGTTT-AA-AGATA----A-T-T-AA
i Monodon_monoceros.MonMon_M_scaffold_5598              I 5 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                163682 42 +    265003 A----TTTTGCTGCTT-------------AT----T---T-T-A-CCT--TCAA-------AGTTT-AA-AGGTA----A-T-T-CA
i Mormoops_blainvillei.MorMeg_scaffold_2952             I 5 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  6426 28 -     19904 -----------------------------------T---T-T-A-TCT--TCAG-------AGTTT-GA-AGAGG----A-T-T-TA
i Moschus_moschiferus.MosMos_scaffold_78805             I 7 I 26
s Mungos_mungo.MunMun_flattened_line_8729                  150510 42 -    168139 G----TTTTGCTAC-------CT------AT----T---T-T-A-ACT--GCAA-------AGTAT-AA-AGATA----A-T-T-CA
i Mungos_mungo.MunMun_flattened_line_8729               I 5 C 0
s Murina_feae.MurFea_scaffold_2254                          24616 42 -    100666 G----TTTTACTGC-------C-----C-AT----T---T-C-A-CCT--TCAA-------AGTTT-AA-AGATA----A-T-T-CA
i Murina_feae.MurFea_scaffold_2254                      I 5 C 0
s Mus_caroli.LT608236.1                                  70772042 42 +  92629107 A----TATTGCTAT------G-T------AA----T---T-T-A-TCC--TTAA-------ATTTC-A-TAGATA----A-C-T-CA
i Mus_caroli.LT608236.1                                 I 1 C 0
s Mus_musculus.chr16                                     75494096 42 +  98207768 A----TATTGCTAC------G-T------AA----T---T-T-A-TCC--TTAA-------ATTGC-A-TAGATA----A-C-T-CA
i Mus_musculus.chr16                                    I 1 C 0
s Mus_pahari.LT608305.1                                  67560848 42 +  89017189 A----TATTGCTAT------G-T------AA----T---T-T-A-TCC--TCAA-------ATTTC-A-TAGATA----A-C-T-CA
i Mus_pahari.LT608305.1                                 I 1 C 0
s Mus_spretus.CM004110.1                                 74336822 42 +  97876770 A----TATTGCTAT------G-T------AA----T---T-T-A-TCC--TTAA-------ATTGC-A-TAGATA----A-C-T-CA
i Mus_spretus.CM004110.1                                I 1 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             15073 20 +     98495 C----ATCAGCTGC---A---C-------AT----T---T-T-A-TA----------------------------------------
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 5 I 14
s Mustela_putorius.JH417978.1                             4428889 26 -  28371801 -----------------------------------------C-A-CCT--GCAA-------AGTAT-AA-AGATA----A-T-T-CA
i Mustela_putorius.JH417978.1                           I 20 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     94035 41 -    117718 G----TCTTGCTGC---A---C-------AT----T---T-T-C-TTT--TCAA-------AGTTT-A--GGACA----A-T-T-TG
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 4 C 0
s Myotis_brandtii.KE161952.1                               971488 42 +   8389877 G----TTTTGCTAC-------C-----C-AT----T---T-C-A-CCT--TCAA-------AGTTT-AA-AGATA----A-T-T-CA
i Myotis_brandtii.KE161952.1                            I 5 I 1
s Myotis_davidii.KB114863.1                               5022908 42 +   6462685 G----TTTTGCTAC-------C-----C-AT----T---T-C-A-CCT--TAAA-------AGTTT-AA-AGATA----A-T-T-CA
i Myotis_davidii.KB114863.1                             I 5 I 1
s Myotis_lucifugus.GL429887.1                             3468992 42 -   3747815 G----TTTTGCTAC-------C-----C-AT----T---T-C-A-CCT--TAAA-------AGTTT-AA-AGATA----A-T-T-CA
i Myotis_lucifugus.GL429887.1                           I 5 I 1
s Myotis_myotis.MyoMyo_scaffold_6123                        14233 42 +     66751 G----TTTTGCTAC-------C-----C-AT----T---T-C-A-CCT--TAAA-------AGTTT-AA-AGATA----A-T-T-CA
i Myotis_myotis.MyoMyo_scaffold_6123                    I 5 I 1
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             7834 41 -      8794 A----ATTTGCTTC-------CT------AT----T---T-T-A-CCT--TCGA-------AGTAT-AA-AGATA----A-A-T-C-
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        I 5 C 0
s Nannospalax_galili.KL201303.1                            240830 23 -    362372 ----------------------------------------------CT--TCAA-------AGCTG-A-TAGATA----A-T-T-CA
i Nannospalax_galili.KL201303.1                         n 1041 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4490535 42 -  14209539 G----TTTTGCTAC-------CT------AT----T---T-T-A-CCT--ACAG-------AATAT-AC-AGATA----A-C-T-CA
i Neomonachus_schauinslandi.NINY01007774.1              I 5 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3955021 38 -   4490290 A----CTTTGCT-----------------AT----T---T-T-A-TCT--TCAA-------AGTTT-AA-Agata----a-t-t-aa
i Neophocaena_asiaeorientalis.KZ688543.1                I 5 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  50743 42 +     94413 G----TTTTGCTGC-------CT------AT----T---T-T-A-TCC--TCAA-------AGTTT-AA-AGATA----A-T-T-TT
i Noctilio_leporinus.NocLep_scaffold_12062              I 5 C 0
s Nomascus_annamensis.k141_762468                             436 42 -      2755 C----TTTTGCTAC---AT----------GT----T---T-T-A-TTT--TTGA-------GGTTT-AA-GAATC----A-T-T-CA
i Nomascus_annamensis.k141_762468                       C 0 C 0
s Nomascus_concolor.k141_256540                              7048 42 -      8966 C----TTTTGCTAC---AT----------GT----T---T-T-A-TTT--TTGA-------GGTTT-AA-GAATC----A-T-T-CA
i Nomascus_concolor.k141_256540                         n 42 I 4
s Nomascus_gabriellae.k141_1400361                            987 42 -      2203 C----TTTTGCTAC---AT----------GT----T---T-T-A-TTT--TTGA-------GGTTT-AA-GAATC----A-T-T-CA
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_453                             6299 42 +     12787 C----TTTTGCTAC---AT----------GT----T---T-T-A-TTT--TTGA-------GGTTT-AA-GAATC----A-T-T-CA
i Nomascus_siki_b.tarseq_453                        C 0 C 0
s Nomascus_siki_a.k141_421408                                   901 42 +     16235 C----TTTTGCTAC---AT----------GT----T---T-T-A-TTT--TTGA-------GGTTT-AA-GAATC----A-T-T-CA
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                38264 43 +   3668941 G----TTTTTCTAC-------CT------AT----T---T-TTA-CCT--ACAA-------AGTAT-AA-AGATA----A-T-T-CA
i Nyctereutes_procyonoides.CAJHUB010000786.1            I 5 C 0
s Nycticebus_bengalensis.LG16                            65572144 42 -  95554990 C----TTTTGCTAC---AT----------AT----T---T-T-A-TCT--TCAA-------GGCTT-AA-AGATA----A-T-G-TA
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_771591                            15554 42 +     16181 C----TTTTGCTAC---AT----------AT----T---T-T-A-TCT--TCAA-------GGCTT-AA-AGATA----A-T-G-TA
i Nycticebus_coucang.k141_771591                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65680332 42 +  89412551 C----TTTTGCTAC---AT----------AT----T---T-T-A-TCT--TCAA-------GGCTT-AA-AGATA----A-T-G-TA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            5000115 42 -  23139505 a----ttttgcaaa-------------atat----t---t-c-a-tcC--TTAC-------AGTTT-AA-GAATC----a-c-t-ca
i Ochotona_princeps.JH802095.1                          I 5 C 0
s Octodon_degus.JH651621.1                                3689524 41 +  10294119 T----GCTTGctgc-------------acat----t---t-t-a-ttt--tcaa-------agttt-g--agaca----a-t-t-ta
i Octodon_degus.JH651621.1                              I 4 C 0
s Odobenus_rosmarus.KB229369.1                             685238 42 -   3126709 G----TTTTGCTAC-------CT------AT----T---T-T-A-CCT--ACAG-------AATAT-AC-AGATA----A-C-T-CA
i Odobenus_rosmarus.KB229369.1                          I 5 C 0
s Odocoileus_virginianus.KZ101650.1                       1083856 28 +   1425656 -----------------------------------T---T-T-A-TCC--TCAA-------AGTTT-AA-AGAGG----A-T-T-TA
i Odocoileus_virginianus.KZ101650.1                     I 7 I 26
s Okapia_johnstoni.LVCL01S0017931.1                         41934 26 +     78940 -----------------------------------------T-A-TCT--TCAA-------AGTTT-AA-AGAGG----A-T-T-TA
i Okapia_johnstoni.LVCL01S0017931.1                     I 1 I 26
s Ondatra_zibethicus.OndZib_scaffold_6821                  130632 18 +    145789 -----------------------------------------------------A-------GATTC-A-CAGATA----A-T-T-CA
i Ondatra_zibethicus.OndZib_scaffold_6821               I 20 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  43308 20 +     62360 A----TTTTACTAT------G-T------AA----T---T-T-A-TC----------------------------------------
i Onychomys_torridus.OnyTor_scaffold_12578              I 1 I 18
s Orcinus_orca.KB316965.1                                 7228695 38 -   7562323 A----CTTTGCT-----------------AT----T---T-T-A-TCT--TCAA-------AGTTT-AA-AGata----a-t-t-aa
i Orcinus_orca.KB316965.1                               I 5 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              64432  7 -     66828 -------------------------------------------------------------------------TA----A-T-T-CA
i Orycteropus_afer.OryAfe_flattened_line_13509          I 9 C 0
s Oryctolagus_cuniculus.CM000803.1                      141884087 41 + 163896628 -----TTCAGCtac-------------aaat----t---t-t-a-tct--ttaa-------agttT-GA-GAATA----A-T-T-CA
i Oryctolagus_cuniculus.CM000803.1                      I 1 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      315402 43 -    505867 g----tttttctac-------------cttt----t---t-tta-cAT--ACAA-------AGTAT-AA-AGATA----A-T-T-CA
i Otocyon_megalotis.JAEUCK010005121.1                   I 5 C 0
s Otolemur_crassicaudatus.k141_505435                        5380 42 -     53940 C----TTTTGCTAT------G-T------AT----T---T-T-A-TCT--TCAA-------GGCTT-AA-AGATA----A-T-A-TA
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18013349 42 -  38779656 C----TTTTGCTAT------G-T------AT----T---T-T-A-TCT--TCAA-------GGctt-aa-agata----a-t-a-ta
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134082863 28 - 275406953 -----------------------------------T---T-T-A-TCT--TCAG-------AGTTT-AA-AGAGg----a-t-t-ta
i Ovis_aries.CM001582.2                                 I 7 I 26
s Ovis_canadensis.OviCan_scaffold_6251                      84097 28 +    140051 -----------------------------------T---T-T-A-TCT--TCAG-------AGTTT-AA-AGAGG----A-T-T-TA
i Ovis_canadensis.OviCan_scaffold_6251                  I 7 I 26
s Pan_paniscus.CM003386.1                               127578723 42 - 205426864 C----TTTTgctac-------------atgt----t---t-t-a-ttt--ttga-------ggttt-AA-GAATT----A-T-T-CA
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120155883 42 - 196562556 C----TTTTgctac-------------atgt----t---t-t-a-ttt--ttga-------ggttt-AA-GAATT----A-T-T-CA
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  40125 42 +    295523 G----TTTTGCTAC-------CT------AT----T---T-T-A-ACT--GCAA-------AGGAT-AA-AGGTA----A-T-T-CA
i Panthera_onca.PanOnc_flattened_line_1615              I 5 C 0
s Panthera_pardus.KV860323.1                              3643940 42 +  18214204 G----TTTTGCTAC-------CT------AT----T---T-T-A-ACT--GCAA-------AGGAT-AA-AGGTA----A-T-T-CA
i Panthera_pardus.KV860323.1                            I 5 C 0
s Panthera_tigris.KE721879.1                              5033588 42 -   6340057 G----TTTCGCTAC-------CT------AT----T---T-T-A-ACT--GCAA-------AGGAT-AA-AGGTA----A-T-T-CA
i Panthera_tigris.KE721879.1                            I 5 C 0
s Pantholops_hodgsonii.KE114631.1                         1071733 28 -   1292953 -----------------------------------T---T-T-A-TCT--TCAG-------AGTTT-AA-AGagg----a-t-t-ta
i Pantholops_hodgsonii.KE114631.1                       I 7 I 27
s Papio_anubis.CM001492.2                               188160611 42 - 188283584 C----TTTTgctac-------------atgt----t---t-t-a-ttt--ttga-------ggttt-AA-GAATT----A-T-T-CA
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              3701 42 +     25005 C----TTTTGCTAC---AT----------GT----T---T-T-A-TTT--TTGA-------GGTTT-AA-GAATT----A-T-T-CA
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47517983 42 +  47705337 C----TTTTGCTAC---AT----------GT----T---T-T-A-TTT--TTGA-------GGTTT-AA-GAATT----A-T-T-CA
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 71974 42 -    104429 C----TTTTGCTAC---AT----------GT----T---T-T-A-TTT--TTGA-------GGTTT-AA-GAATT----A-T-T-CA
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   10506 42 +     14967 C----TTTTGCTAC---AT----------GT----T---T-T-A-TTT--TTGA-------GGTTT-AA-GAATT----A-T-T-CA
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 6371 42 -      7628 C----TTTTGCTAC---AT----------GT----T---T-T-A-TTT--TTGA-------GGTTT-AA-GAATT----A-T-T-CA
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    121612 42 -    135482 A----TTTTGCTAC-------CT------AT----T---T-T-A-ACT--GCAA-------AGCAC-AA-ATATA----A-T-T-CA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 I 5 C 0
s Perodicticus_ibeanus.k141_117958                          11044 42 -     23713 C----TTTTGCTAC------G-T------AT----T---T-T-A-TCT--TCAA-------GGCTT-AA-AGATA----A-T-G-TA
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           12195 42 +     61070 C----TTTTGCTAC------G-T------AT----T---T-T-A-TCT--TCAA-------GGCTT-AA-AGATA----A-T-G-TA
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       2466 41 +     49596 T----TTTTGGTAT---A---C-------AT----T---T-T-G-CAT--TTAA-------AGTTT-A--AAGTA----A-T-T-CA
i Perognathus_longimembris.PerPac_flattened_line_19359  I 6 C 0
s Peromyscus_maniculatus.KI615518.1                       4955694 18 -   8017169 -----------------------------------------------------A-------AATTC-A-CAGATT----A-T-T-CA
i Peromyscus_maniculatus.KI615518.1                     I 21 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              3162 38 +      8220 A----CTTTGCT-----------------AT----T---T-T-A-TCT--TCAA-------AGTTT-AA-AGATA----A-T-T-AA
i Phocoena_phocoena.PhoPho_flattened_line_53071         I 5 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            99772 42 +    112873 G----TTTTGCTAC-------C-----C-AT----T---T-C-A-CCT--TCAA-------AGTTT-AA-AGATA----A-T-T-CA
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        I 2 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           9633 38 +     21690 A----CTTTGCT-----------------AT----T---T-T-A-TCT--TCAA-------AGTTT-AA-AGATA----A-T-T-CA
i Platanista_gangetica.PlaMin_flattened_line_72990      I 5 C 0
s Plecturocebus_bernhardi.k141_959214                       26306 42 +     44506 C----TTTGGCTAC---A------------T--GTT---T-T-A-TTT--TTGA-------AGTTT-AA-GAGTA----A-T-T-CA
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        26519 42 +     67491 C----TTTGGCTGC---A------------T--GTT---T-T-A-TTT--TTGA-------AGTTT-AA-GAGTA----A-T-T-CA
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      16758 42 -     98129 C----TTTGGCTGC---A------------T--GTT---T-T-A-TTT--TTGA-------AGTTT-AA-GAGTA----A-T-T-CA
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     26359 42 +    147771 C----TTTGGCTAC---A------------T--GTT---T-T-A-TTT--TTGA-------AGTTT-AA-GAGTA----A-T-T-CA
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         2994 42 -     43940 C----TTTGGCTGC---A------------T--GTT---T-T-A-TTT--TTGA-------AGTTT-AA-GAGTA----A-T-T-CA
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          7077 42 -     55515 C----TTTGGCTGC---A------------T--GTT---T-T-A-TTT--TTGA-------AGTTT-AA-GAGTA----A-T-T-CA
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         26431 42 +    152463 C----TTTGGCTAC---A------------T--GTT---T-T-A-TTT--TTGA-------AGTTT-AA-GAGTA----A-T-T-CA
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       4239 42 -    119457 C----TTTGGCTAC---A------------T--GTT---T-T-A-TTT--TTGA-------AGTTT-AA-GAGTA----A-T-T-CA
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         16154 42 +    134592 C----TTTGGCTAC---A------------T--GTT---T-T-A-TTT--TTGA-------AGTTT-AA-GAGTA----A-T-T-CA
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          26741 42 -     75465 C----TTTGGCTAC---A------------T--GTT---T-T-A-TTT--TTGA-------AGTTT-AA-GAGTA----A-T-T-CA
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              191354 42 -    373494 C----TTTTgctac-------------atgt----t---t-t-a-ttt--ttga-------ggttt-AA-GAATT----A-T-T-CA
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19812001 42 +  19899266 C----TTTTGCTAC---AT----------GT----T---T-T-A-TTT--TTGA-------GGTTT-AA-GAATT----A-T-T-CA
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                4163 42 -      9567 G----TTCTACT-----------------GTATAGT---C-T-A-CCT--TTAA-------ATTTT-AA-AGACA----G-T-T-CA
i Procavia_capensis.ProCapCap_scaffold_149274           I 2 C 0
s Prolemur_simus.MPIZ01000048.1                           6852977 42 +  12164890 C----TTTTACTAC---A---C-------AT----T---T-T-A-TCT--TTGA-------AGATT-AA-AGATA----A-T-G-CA
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     21786 42 -     30946 N----NNNNNNNNN-------------NNNN----N---N-N-N-NNN--NNNN-------NNNNN-NN-NNNNN----N-N-N-NN
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         8063 42 +     11805 C----TTTTGCTAC---AT----------AT----T---T-T-A-TCT--TCAA-------AGTTT-AA-AGATA----A-T-G-TA
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           47397 42 +     52369 C----TTTTGCTAC---AT----------AT----T---T-T-A-TCT--TCAA-------AGTTT-AA-AGATA----A-T-G-TA
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         39784 42 -     44753 C----TTTTGCTAC---AT----------AT----T---T-T-A-TCT--TCAA-------AGTTT-AA-AGATA----A-T-G-TA
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            21707 42 +     27322 C----TTTTGCTAC---AT----------AT----T---T-T-A-TCT--TCAA-------AGTTT-AA-AGATA----A-T-G-TA
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       21356 42 -     53241 C----TTTTGCTAC---AT----------AT----T---T-T-A-TCT--TCAA-------AGTTT-AA-AGATA----A-T-G-TA
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         43619 42 -     48185 C----TTTTGCTAC---AT----------AT----T---T-T-A-TCT--TCAA-------AGTTT-AA-AGATA----A-T-G-TA
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           38462 42 +     77221 A----TTTTACTAT------G-T------AC----T---T-T-A-TCT--TCAT-------AATTC-A-CAAAAA----A-T-T-CA
i Psammomys_obesus.NESX01026517.1                       I 1 C 0
s Pteronotus_parnellii.KE867983.1                            6325 42 -     27784 G----TTTTGCTGC-------CT------AT----T---T-T-A-CCT--TCAA-------AGTTT-At-agata----a-t-t-ca
i Pteronotus_parnellii.KE867983.1                       I 5 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        250540 26 -    344369 -----------------------------------------T-A-CCC--GCAA-------AGTAT-AA-AGATA----A-T-T-CA
i Pteronura_brasiliensis.PteBra_flattened_line_1343     I 20 C 0
s Puma_concolor.QAVW01000427.1                          131540237 42 - 161321710 G----TTTTGCTAC-------CT------AT----T---T-T-A-ACT--GCAA-------AGGAT-AA-AGGTA----A-T-T-CA
i Puma_concolor.QAVW01000427.1                          I 5 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                20721 28 +     68503 -----------------------------------T---T-T-A-TCT--TCAA-------AGTTT-AA-AGAGG----A-T-T-TA
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 7 I 26
s Rattus_norvegicus.chr11                                13917881 42 +  90463843 A----TATTGCTGT------G-T------AA----T---T-T-A-TCC--TCAA-------ATTTC-A-TAGATA----A-C-T-CA
i Rattus_norvegicus.chr11                               I 1 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1792837 42 +   2252614 G----TTTTGCTAC-------CT------AT----T---T-T-A-CTT--TCAA-------AGTTT-AA-agata----a-t-t-ca
i Rhinolophus_sinicus.LVEH01000179.1                    I 5 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                      1132 28 -      4338 -----------------------------------T---T-T-A-TCT--TCAG-------AGTTT-AA-AGAGG----A-T-T-TA
i Saiga_tatarica.SaiTat_scaffold_371890                 I 7 I 26
s Saimiri_boliviensis.NW_024100938.1                     15676762 42 -  43202129 C----TTTTgctac-------------atgt----t---t-t-a-ttt--ttga-------aattt-aa-gaatA----A-G-T-CA
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        8675 42 +     34089 C----TTTTGCTAC---AT----------GA----T---T-T-A-TTT--TTGA-------AATTT-AA-GAATA----A-G-T-CA
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              8615 42 -     60842 C----TTTTGCTAC---AT----------GT----T---T-T-A-TTT--TTGA-------AATTT-AA-GAATA----A-G-T-CA
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              8709 42 +     67014 C----TTTTGCTAC---AT----------GT----T---T-T-A-TTT--TTGA-------AATTT-AA-GAATA----A-G-T-CA
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              8686 42 +     60816 C----TTTTGCTAC---AT----------GT----T---T-T-A-TTT--TTGA-------AATTT-AA-GAATA----A-G-T-CA
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 8623 42 -     76454 C----TTTTGCTAC---AT----------GT----T---T-T-A-TTT--TTGA-------AATTT-AA-GAATA----A-G-T-CA
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17345408 42 -  30362882 C----TTTTGTTAC---AT----------GA----T---T-T-A-TTT--TTGA-------AATTT-AA-GAATA----A-T-T-CA
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         24729 42 -     62485 C----TTTTGTTAC---AT----------GA----T---T-T-A-TTT--TTGA-------AATTT-AA-GAATA----A-T-T-CA
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   39851 31 -    114521 G----TTTTGCTAT---AT----------AT----T---T-T-A-CCT--TCAA-------AGTTT-A-------------------
i Scalopus_aquaticus.ScaAqu_scaffold_9300               I 5 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  105695 18 -    120886 -----------------------------------------------------A-------AATTC-A-CAGGTA----A-T-A-CA
i Sigmodon_hispidus.SigHis_scaffold_11332               I 21 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            23776 41 +    739146 T----TTTTTCTAT---AT----------AT----T---T-T-A-TCT--GCAA-------AGT-T-AG-AGATA----G-G-T-CA
i Solenodon_paradoxus.SolPar_flattened_line_1012        I 5 C 0
s Sorex_araneus.JH798170.1                               17774009 43 -  27805282 AT---TTTTGATTC-------CT------AT----T---T-T-A-T-Catgaaa-------agt-t-aa-agaaa----a-t-t-ta
i Sorex_araneus.JH798170.1                              I 5 C 0
s Spermophilus_dauricus.KZ294190.1                        2244280 15 +   2842873 C----TTTtgctac-------------atat----t---------------------------------------------------
i Spermophilus_dauricus.KZ294190.1                      I 5 I 18
s Spilogale_gracilis.SpiGra_flattened_line_905             239307 42 -    276980 G----TTTTGTTTC-------CT------AT----T---T-T-A-CCT--GCAA-------AGTAC-AA-ACATA----A-T-T-CA
i Spilogale_gracilis.SpiGra_flattened_line_905          I 5 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            33427 42 +     62062 G----TTTTGCTAT-------CT------AT----T---T-T-A-ACT--GCAA-------AGTAT-AA-AGATA----A-T-T-CA
i Suricata_suricatta.SurSur_flattened_line_20339        I 5 C 0
s Sus_scrofa.CM000824.4                                 189275212 42 + 218635234 A----TTTTGCCACTT-------------AT----T---T-T-A-TCT--ACAA-------AGTTT-AA-AGATA----A-T-T-CA
i Sus_scrofa.CM000824.4                                 I 3 C 0
s Symphalangus_syndactylus.tarseq_24                        19024 42 -  13920577 C----TTTTGCTAC---AT----------GT----T---T-T-A-TTT--TTGA-------GGTTT-AA-GAATC----A-T-T-CA
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                2556 42 +     20549 G----TTTTGCTAC-------CT------AT----T---T-T-A-CCT--TCAA-------AGTTT-AA-AGATA----A-T-T-CA
i Tadarida_brasiliensis.TadBra_scaffold_61492           I 5 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               17507 41 +     45698 A----ATTTGCTTC-------CT------AT----T---T-T-A-CCT--TCGA-------AGTGT-AA-AGATA----A-A-T-C-
i Tamandua_tetradactyla.TamTet_scaffold_26877           I 5 C 0
s Tapirus_indicus.TapInd_scaffold_176                      811017 42 +   1148477 G----TTTTGCCAC-------CT------AT----T---T-T-A-CCT--TTGA-------AGTTT-AA-AGATA----A-T-T-CA
i Tapirus_indicus.TapInd_scaffold_176                   I 5 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  61659 42 +     99546 G----TTTTGCCAC-------CT------AT----T---T-T-A-CCT--TTGA-------AGTTT-AA-AGATA----A-T-T-CA
i Tapirus_terrestris.TapTer_scaffold_14939              I 5 C 0
s Theropithecus_gelada.CM009951.1                       194012144 42 - 194193292 C----TTTTgctac-------------atgt----t---t-t-a-ttt--ttga-------ggttt-aA-GAATT----A-T-T-CA
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                   616 40 -      3104 G----TTTTGTTAC---AT-----------T----T---T-T-A-CCT--TCAA-------AGTTT-AA-AGATA----A-T-T-C-
i Tolypeutes_matacus.TolMat_scaffold_475685             I 5 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  138322 43 -    259118 G----TTTTGCTGC-------CT------AT----T---TTT-G-CTT--TCAA-------AGTTT-AA-AGATA----A-T-T-TA
i Tonatia_saurophila.TonSau_scaffold_3334               I 5 I 2
s Trichechus_manatus.JH594618.1                          16090052 42 +  31416278 g----ttttact-----------------gtatatt---t-t-a-cct--ttaa-------atttt-aa-agata----a-t-t-ca
i Trichechus_manatus.JH594618.1                         I 2 C 0
s Tupaia_chinensis.KB320831.1                             2797987 24 -   3938065 G----T-TTGCTAC---AT---T------AT----T---T-T-G-CCT--GTG----------------------------------
i Tupaia_chinensis.KB320831.1                           I 5 I 12
s Tupaia_tana.TupTan_flattened_line_68454                    9922 20 +     13056 G----T-----TAC---AT---T------AT----T---T-T-G-TCT--GTG----------------------------------
i Tupaia_tana.TupTan_flattened_line_68454               I 5 I 12
s Tursiops_truncatus.MRVK01000923.1                      69317424 38 -  96451834 A----CTTTGCT-----------------AT----T---T-T-A-TCT--TCAA-------AGTTT-Aa-agata----a-t-t-aa
i Tursiops_truncatus.MRVK01000923.1                     I 5 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                     307 33 +    136657 G----TTTTGCTAT------G-T------AT----T---T-T-A-CCT--GCAG-------ACTTT-AA-A----------------
i Uropsilus_gracilis.UroGra_scaffold_4115               I 5 C 0
s Ursus_maritimus.KK498671.1                              6520940 42 +  28682327 G----TTTTGCTAC-------CT------AT----T---T-T-A-CCT--CCAG-------AGTAT-AA-AGATA----A-T-T-CA
i Ursus_maritimus.KK498671.1                            I 5 C 0
s Varecia_rubra.k141_432109                                  9620 42 -     20643 C----TTTTGCTAC---AT----------AT----T---T-T-A-TCT--TTGA-------AGATT-AA-AGATA----A-T-G-CA
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             29155 42 -     33872 C----TTTTGCTAC---AT----------AT----T---T-T-A-TCT--TTGA-------AGATT-AA-AGATA----A-T-G-CA
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1528447 21 -   2331223 G----TCTTGCtat-------------ctat----t---t-t-a-tct---------------------------------------
i Vicugna_pacos.KN269600.1                              I 5 I 14
s Vulpes_lagopus.VulLag_flattened_line_2045                144629 43 -    281493 G----TTTTTCTAC-------CT------AT----T---T-TTA-CCT--ACAA-------AGTAT-AA-AGATA----A-T-T-CA
i Vulpes_lagopus.VulLag_flattened_line_2045             I 5 C 0
s Xerus_inauris.XerIna_scaffold_7898                       131776 20 -    134049 C----TTTTGCAAC---A---C-------AT----T---T-T-A-TT----------------------------------------
i Xerus_inauris.XerIna_scaffold_7898                    I 5 I 14
s Zalophus_californianus.ZalCal_flattened_line_4097        220096 42 -    227762 G----TTTTGCTAC-------CT------AT----T---T-T-A-TCT--ACAG-------AATAT-AC-AGATA----A-C-T-CA
i Zalophus_californianus.ZalCal_flattened_line_4097     I 5 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            2172 38 -     13665 A----CTTTGCT-----------------AC----T---T-T-A-TCT--TCAA-------AGTTT-AA-AGATA----A-T-T-CA
i Ziphius_cavirostris.ZipCav_flattened_line_60625       I 5 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Petromus_typicus.PetTyp_scaffold_33007                    17492  0 -     36578 C
e Tragulus_javanicus.TraJav_scaffold_14717                   9488 743 +     90398 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Equus_przewalskii.ATBW01073585.1                          16581  0 +     92910 C
e Equus_caballus.CM000402.2                              13355091  0 +  41866177 C
e Equus_asinus.JREZ01000062.1                             5856591  0 -   7175178 C
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Zapus_hudsonius.ZapHud_scaffold_256618                      408  0 -      2259 C
e Jaculus_jaculus.JH725517.1                              8577673  0 +  11848649 C
e Allactaga_bullata.AllBul_scaffold_141108                    666  0 -      7259 C
e Trachypithecus_pileatus.k141_1022309                       5226  0 +     13828 C
e Trachypithecus_phayrei.ctg3                            44662914  0 -  44834318 C
e Trachypithecus_obscurus.k141_1115109                       8130  0 -     28054 C
e Trachypithecus_melamera.k141_699241                        2986  0 -     24393 C
e Trachypithecus_leucocephalus.k141_381681                   3005  0 +     12481 C
e Trachypithecus_laotum.k141_760702                          4719  0 +     14371 C
e Trachypithecus_hatinhensis.k141_504423                     6067  0 -     15592 C
e Trachypithecus_germaini.k141_868450                        3883  0 -     11566 C
e Trachypithecus_geei.k141_670367                           46082  0 -     54611 C
e Trachypithecus_francoisi.k141_768164                       4689  0 -     14244 C
e Trachypithecus_cristatus.k141_1011511                      5261  0 -     12939 C
e Trachypithecus_crepusculus.k141_1588528                   23360  0 -     32910 C
e Trachypithecus_auratus.k141_738098                        29800  0 +     38948 C
e Tarsius_wallacei.k141_48636                               64696  0 +     65473 C
e Tarsius_lariang.k141_609102                               31387  0 +     42269 C
e Semnopithecus_vetulus.k141_1143185                        16479  0 +     30600 C
e Semnopithecus_schistaceus.k141_387461                     33457  0 +     42640 C
e Semnopithecus_priam.k141_410937                           40312  0 +     46263 C
e Semnopithecus_johnii.k141_785014                         121532  0 +    130994 C
e Semnopithecus_hypoleucos.k141_761524                      11528  0 +     20762 C
e Semnopithecus_entellus.k141_1572367                        6153  0 +     15331 C
e Rhinopithecus_strykeri.ctg4                            44859307  0 -  45163003 C
e Rhinopithecus_bieti.k119_554384                            2917  0 -     17045 C
e Pygathrix_nigripes_a.k141_101123                             8537  0 +     18040 C
e Pygathrix_nigripes_b.ctg79                                 6809148  0 +   6970761 C
e Pygathrix_cinerea.k141_374971                             32651  0 +     56732 C
e Presbytis_mitrata.k141_860013                              8661  0 +     14865 C
e Presbytis_comata.k141_672698                               8546  0 -     15069 C
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000036.1               26743271  0 +  26888534 C
e Piliocolobus_kirkii.k141_929665                            4788  0 +      7694 C
e Piliocolobus_gordonorum.k141_1270531                       5421  0 -     17985 C
e Piliocolobus_badius.k141_1987485                           4802  0 -      5908 C
e Nasalis_larvatus.k141_153429                              11264  0 +     48152 C
e Colobus_polykomos.k141_1406057                            19335  0 +     23629 C
e Colobus_guereza.LG08                                  147667351  0 + 156195979 C
e Colobus_angolensis.KN985967.1                          10889423  0 +  10971483 C
e Cephalopachus_bancanus.k141_702587                        12545  0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530  0 +    345090 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               17787  4 +    209709 t-t--------t-----------a
s Acinonyx_jubatus.LLWD01000356.1                         2039753  5 +   3721120 T-T-------TC-----------T
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    118007  3 -    189883 A-g--------a------------
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10663714  5 +  23371972 T-T-------GC-----------T
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7100243  5 -  16596857 T-T-------TC-----------T
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   5662  4 -     60446 T-T--------T-----------A
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         6379  4 -     29318 T-T--------T-----------A
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         5317  4 +     38766 T-T--------T-----------A
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          6273  4 -     80423 T-T--------T-----------A
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              1256  4 +     19852 T-T--------T-----------A
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                3500  4 -     12443 T-T--------T-----------A
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                              799  4 +      5070 T-T--------T-----------A
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                  544  4 -      1641 T-T--------T-----------A
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          3283  4 -     24210 T-T--------T-----------A
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           29865  4 -     30219 T-T--------T-----------A
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_405616                              5701  4 +     16794 T-T--------T-----------A
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                             833  4 -      1470 T-T--------T-----------A
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             4978  4 -      9835 T-T--------T-----------A
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3525782  5 +   4113121 t-t-------tt-----------t
i Ammotragus_lervia.NIVO01013474.1                      I 26 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      392806  7 -    631301 T-T-----TTTT-----------T
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             3215  5 +     55446 T-T-------TT-----------T
i Antilocapra_americana.AntAmePen_scaffold_27338        I 26 C 0
s Aotus_azarae.k141_3170768                                 66587  4 +     78111 T-T--------T-----------A
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            9535  4 +     22701 T-T--------T-----------A
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5753492  4 +   9889416 T-T--------T-----------A
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                            10091  4 -    104377 T-T--------T-----------A
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                              10098  4 +     23246 T-T--------T-----------A
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     2626  6 +     11424 T-T------CTT-----------T
i Aplodontia_rufa.AprRuf_scaffold_101456                I 14 C 0
s Arctocebus_calabarensis.k141_587554                        6713  4 +      9265 T-T--------T-----------T
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9543386  4 +  39197703 T-T--------T-----------A
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             64660  4 +     85812 T-T--------T-----------A
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                15673  4 +     89302 T-T--------T-----------A
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             20174  4 -     58268 T-T--------T-----------A
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             68168  4 +    119057 T-T--------T-----------A
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              10137  4 -     25888 T-T--------T-----------A
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                11197  4 -     16375 T-T--------T-----------T
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               4813  4 +      6337 T-T--------T-----------T
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26384256  5 +  51448160 T-T-------TT-----------T
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        9429  5 -     13118 T-T-------TT-----------T
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   48246  5 -     72089 T-T-------TT-----------T
i Beatragus_hunteri.BeaHun_scaffold_21644               I 26 C 0
s Bison_bison.KN264915.1                                   302390  5 -   6870073 T-T-------TT-----------T
i Bison_bison.KN264915.1                                I 26 C 0
s Bos_indicus.CM003021.1                                 22956488  5 + 161108492 T-T-------TT-----------T
i Bos_indicus.CM003021.1                                I 26 C 0
s Bos_mutus.JH883513.1                                     418729  5 +    998990 t-t-------tt-----------t
i Bos_mutus.JH883513.1                                  I 15 C 0
s Bos_taurus.CM000177.6                                  22665142  5 + 158972876 T-T-------TT-----------T
i Bos_taurus.CM000177.6                                 I 26 C 0
s Bubalus_bubalis.KI419065.1                               674896  5 +   1914593 T-T-------TT-----------T
i Bubalus_bubalis.KI419065.1                            I 26 C 0
s Cacajao_ayresi.k141_724503                               118040  4 -    171031 T-T--------T-----------A
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 17060  4 +    125063 T-T--------T-----------A
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                19107  4 -    216513 T-T--------T-----------A
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       11650  4 -    134917 T-T--------T-----------A
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3223374  5 -   8989139 t-t-------tt-----------t
i Camelus_bactrianus.KN276303.1                         I 14 C 0
s Camelus_dromedarius.KN271192.1                           401075  5 -  15254737 t-t-------tt-----------t
i Camelus_dromedarius.KN271192.1                        I 14 C 0
s Camelus_ferus.KB016973.1                                2976812  5 +   6889770 t-t-------tt-----------t
i Camelus_ferus.KB016973.1                              I 14 C 0
s CanFam4.chr31                                          11526592  5 +  39901454 T-T-------TC-----------T
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   21566  5 +     87036 T-T-------TC-----------T
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11273275  5 -  35597290 t-t-------tc-----------t
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11095986  5 +  39895921 t-t-------tc-----------t
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16462771  5 -  44759192 t-t-------tc-----------t
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21333726  5 + 157394656 t-t-------tt-----------t
i Capra_aegagrus.CM003214.1                             I 26 C 0
s Capra_hircus.CM004562.1                               135712081  5 - 157403528 T-T-------TT-----------T
i Capra_hircus.CM004562.1                               I 26 C 0
s Capromys_pilorides.CapPil_scaffold_529800                   454  4 -      2320 C-T--------T-----------T
i Capromys_pilorides.CapPil_scaffold_529800             C 0 I 1
s Carollia_perspicillata.CarPer_scaffold_4436               62226  7 +     67245 T-T-----TTTT-----------T
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_1326                      220  4 -    202837 T-T--------T-----------T
i Castor_canadensis.CasCan_scaffold_1326                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   162898  7 -    276539 T-T-----TTTT-----------T
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18895762  4 -  29618158 T-T--------T-----------A
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                12412  4 -     26817 T-T--------T-----------A
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                16656  4 +     25043 T-T--------T-----------A
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4367826  5 +   7569818 t-t-------tt-----------t
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         7583  5 -      9338 T-T-------TT-----------T
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6559603  4 +   6739814 T-T--------T-----------A
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      31080  4 +     60454 T-T--------T-----------A
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          6284  4 -     21101 T-T--------T-----------A
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         63594  4 -    107033 T-T--------T-----------A
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        6457  4 -     17608 T-T--------T-----------A
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          3622  4 +     45019 T-T--------T-----------A
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           3898  4 +     15177 T-T--------T-----------A
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          6504  4 +     16677 T-T--------T-----------A
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           28694  4 +     35983 T-T--------T-----------A
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11995225  4 +  12117833 T-T--------T-----------A
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46482201  4 +  46592721 T-T--------T-----------A
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                        318  4 -     27215 T-T--------T-----------A
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       6518  4 +     35577 T-T--------T-----------A
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        6312  4 -     25661 T-T--------T-----------A
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        6484  4 -     17744 T-T--------T-----------A
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        25853  4 +     37128 T-T--------T-----------A
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           4816  4 -      6963 T-T--------T-----------T
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           63406  4 -     68416 T-T--------T-----------T
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                           12526  4 +     13308 T-T--------T-----------T
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             9699  4 -     18223 T-T--------T-----------A
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              1437  4 +    188999 T-T--------T-----------A
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           45736  4 +     57117 T-T--------T-----------A
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          50416  4 +     54541 T-T--------T-----------A
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15964607  4 +  43084221 t-t--------t-----------t
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         75219  4 +    196370 T-T--------T-----------A
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          19400  4 +     40510 T-T--------T-----------A
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15144038  4 -  15256731 T-T--------T-----------A
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      38502  4 -     53260 T-T--------T-----------A
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101149061  4 + 101219884 T-T--------T-----------A
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                18927  4 -     21363 T-T--------T-----------T
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           764231  4 +    964067 T-T--------T-----------T
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_629495              2467  5 -      3120 TAG--------T-----------T
i Chrysochloris_asiatica.ChrAsi_scaffold_629495         I 7 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         2753  5 -      5782 T-T-------TT-----------T
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 282893  3 -    399297 C-A--------T------------
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53035250  3 +  72327488 G-G--------T------------
i Cricetulus_griseus.LT883672.1                         I 9 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              2329  4 -     22648 T-T--------T-----------T
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            57739  5 -     70449 T-T-------TC-----------T
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  214504  4 -    956709 T-T--------T-----------T
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 34574  4 -     67205 T-T--------T-----------T
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 I 1
s Cuniculus_paca.CunPac_flattened_line_16637                21095  5 +     26546 T-T--------T----------TT
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 I 1
s Dasyprocta_punctata.DasPun_flattened_line_634             62234  5 -    236241 T-T--------T----------TT
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 I 1
s Dasypus_novemcinctus.JH568778.1                          185896  4 -   6883506 T-T--------T-----------T
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16849357  4 +  31942871 T-T--------T-----------T
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80040875  5 -  96802777 t-t-------tt-----------t
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18701440  6 -  18957592 t-t------ttt-----------t
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 326475  5 +    993696 t-t-------tt-----------t
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   7114  5 +    151128 T-T-------TT-----------T
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   159868  4 +    228994 T-T--------T-----------T
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3660587  4 +   4240102 T-T--------T-----------T
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  2941  4 -     11986 T-T--------T-----------T
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 C 0
s Echinops_telfairi.JH980316.1                           23000132  5 -  44670279 ACT--------T-----------C
i Echinops_telfairi.JH980316.1                          I 7 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1496462  5 +   1727528 t-t-------tt-----------t
i Elaphurus_davidianus.JRFZ01086400.1                   I 26 C 0
s Elephantulus_edwardii.JH947210.1                        7833190  5 +  15467074 ttt--------t-----------t
i Elephantulus_edwardii.JH947210.1                      I 7 C 0
s Ellobius_lutescens.LOEQ01003611.1                        244057  3 -    369425 G-G--------T------------
i Ellobius_lutescens.LOEQ01003611.1                     I 18 C 0
s Enhydra_lutris.KZ291749.1                              85877706  5 +  99434291 T-T-------TC-----------T
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4709196  5 +   6522550 T-T-------TT-----------T
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11541547  5 +  16010500 t-t--------t----------at
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48781071  4 -  48907691 T-T--------T-----------A
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          319099  5 +    330699 T-T-------TT-----------T
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             65556  5 +     89355 T-T-------TT-----------T
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              9510  4 +     13586 C-T--------T-----------T
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_1015201                              2772  4 -      4292 C-T--------T-----------T
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            15906  4 +     36558 C-T--------T-----------T
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            12231  4 +     60246 C-T--------T-----------T
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                15713  4 +    109717 C-T--------T-----------T
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 3699  4 -     19505 C-T--------T-----------T
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                20371  4 +     27497 C-T--------T-----------T
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           22827  4 +     26808 C-T--------T-----------T
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                37562  4 +     46535 C-T--------T-----------T
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              20300  4 -     29447 C-T--------T-----------T
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129899173  5 - 159252932 T-T-------TC-----------T
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129286148  5 - 158578461 T-T-------TC-----------T
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 27247  5 +     52776 T-T-------TC-----------T
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13896379  5 -  19261668 T-T-------TT-----------T
i Fukomys_damarensis.KN123630.1                         C 0 I 1
s Galago_moholi.ctg555                                     215560  4 -    847004 T-T--------T-----------T
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           17921  4 -     43889 T-T--------T-----------T
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          15065  4 +     27357 T-T--------T-----------T
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               159814  4 +    324696 T-T--------T-----------T
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    186252  5 -    189561 T-T-------TT-----------T
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 26 C 0
s Glis_glis.GliGli_scaffold_79770                           16702  4 -     18683 T-T--------T-----------T
i Glis_glis.GliGli_scaffold_79770                       I 14 C 0
s Gorilla_beringei.k141_111300                               9486  4 -     14630 T-T--------T-----------A
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119656586  4 - 195582420 T-T--------T-----------A
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   80020  4 +    118900 T-T--------C-----------T
i Graphiurus_murinus.GraMur_scaffold_4493               I 14 C 0
s Hapalemur_alaotrensis.k141_1280836                         6293  4 +     10286 T-T--------T-----------T
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             4771  4 -     11661 T-T--------T-----------T
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                            10098  4 +     56096 T-T--------T-----------T
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        33347  4 -     42470 T-T--------T-----------T
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        49970  4 -     54384 T-T--------T-----------T
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              22877  5 +     53719 T-T-------TT-----------T
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                33131  5 -     91191 T-T-------TT-----------T
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 26 C 0
s Heterocephalus_glaber.JH602058.1                        2560873  4 +  31725842 T-A--------T-----------T
i Heterocephalus_glaber.JH602058.1                      C 0 I 1
s Heterohyrax_brucei.HetBruBak_scaffold_25354               63100  5 +     73687 TGT--------T-----------T
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              150881  5 +    277961 T-T-------TT-----------T
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      283279  5 -    477199 t-t-------tt-----------t
i Hipposideros_armiger.JXIK01001085.1                   I 47 C 0
s Hipposideros_galeritus.HipGal_scaffold_7653                5842  5 +     86108 T-T-------TT-----------T
i Hipposideros_galeritus.HipGal_scaffold_7653           C 0 I 50
s Hoolock_leuconedys.ctg649                                   109144  4 +    115816 T-T--------T-----------A
i Hoolock_leuconedys.ctg649                                I 175 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 23349  5 -     67322 T-T-------TC-----------T
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hylobates_abbotti.k141_1816750                             1972  4 +      3202 T-T--------T-----------A
i Hylobates_abbotti.k141_1816750                        I 174 C 0
s Hylobates_agilis.k141_1633646                              1942  4 -      2102 T-T--------T-----------A
i Hylobates_agilis.k141_1633646                         I 174 C 0
s Hylobates_klossii.k141_468230                              3460  4 +      5464 T-T--------T-----------A
i Hylobates_klossii.k141_468230                         I 175 C 0
s Hylobates_pileatus_b.ContigUN                                 14628807  4 -  25970782 T-T--------T-----------A
i Hylobates_pileatus_b.ContigUN                                I 175 C 0
s Hylobates_muelleri.k141_1139146                            1359  4 +      4161 T-T--------T-----------A
i Hylobates_muelleri.k141_1139146                       I 175 C 0
s Hylobates_pileatus_a.tarseq_592                             37669  4 -     60944 T-T--------T-----------A
i Hylobates_pileatus_a.tarseq_592                         I 175 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     9775  4 +     22540 T-T--------T-----------T
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7130609 15 +  13083262 t-t--------ttcttcttttttt
i Ictidomys_tridecemlineatus.JH393315.1                 I 18 C 0
s Indri_indri.k141_2197838                                   1819  4 +      3484 T-T--------T-----------T
i Indri_indri.k141_2197838                              I 2 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              13087  5 +     17520 T-T-------TT-----------T
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               27706  5 +     37189 G-T-------TT-----------T
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          54255  4 -    147782 T-T--------T-----------A
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    5808  5 +     26176 T-T-------TT-----------T
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258411645  4 - 285822530 T-T--------T-----------T
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        28959  4 +     39228 T-T--------T-----------T
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            58323  4 +     63517 T-T--------T-----------T
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        36703  4 -     38897 T-T--------T-----------T
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      2749  4 -     13103 T-T--------T-----------T
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3091683  5 -   3498232 T-T-------TC-----------T
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    21111  2 +     22452 T-T---------------------
i Lepus_americanus.LepAme_scaffold_62849                C 0 I 1
s Lipotes_vexillifer.KE558548.1                            140021  5 +   3060487 t-t-------tt-----------t
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19252692  4 +  19376315 T-T--------T-----------A
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           15523  4 +     84689 T-T--------T-----------T
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3783262  4 +   6799190 T-T--------T-----------T
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20599022  5 -  62548349 ttt--------t-----------t
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11095442  5 +  39895028 t-t-------tc-----------t
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             24443  4 +     74745 T-T--------T-----------A
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12710904  4 +  12821369 T-T--------T-----------A
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                3477  4 -     26467 T-T--------T-----------A
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           51348  4 +     63263 T-T--------T-----------A
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 3458  4 -     26361 T-T--------T-----------A
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 6648  4 -      7381 T-T--------T-----------A
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  49877  4 -     79256 T-T--------T-----------A
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196039975  4 + 196197964 T-T--------T-----------A
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11450145  4 +  11645122 t-t--------t-----------a
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   8831  4 -     46448 T-T--------T-----------A
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                6494  4 -     13212 T-T--------T-----------A
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 20174  4 -     55006 T-T--------T-----------A
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43845289  4 +  43892939 T-T--------T-----------A
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               21458  4 -     24607 T-T--------T-----------A
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               8828  4 -     27140 T-T--------T-----------A
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43441864  4 -  43563597 T-T--------T-----------A
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4454668  4 -   4543643 T-T--------T-----------A
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            152403  5 +    252755 T-T-------TT-----------T
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             39993  5 +     58827 T-T-------TT-----------T
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36878481 12 +  64221397 t-t--------ttctt-tttt--t
i Marmota_marmota.CZRN01000005.1                        I 18 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       65836  5 -    234502 T-T-------TT-----------T
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             6598  5 -     87323 T-T-------TC-----------T
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 1509  3 +    115071 T-G--------T------------
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1051778  3 -  26018355 G-G--------T------------
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    2678  5 -     12939 T-T-------TT-----------T
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16514677  4 +  47401472 t-t--------t-----------t
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  41691  5 -     48017 ACT--------T-----------C
i Microgale_talazaci.MicTal_scaffold_34660              I 7 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               25187  7 -     32043 T-T-----TTTT-----------T
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22824854  3 -  98408828 G-G--------T------------
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8213244  5 +  10048721 T-T-------TT-----------t
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            37733  5 +     45743 T-T-------TT-----------T
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         6410  4 +     29742 T-T--------T-----------A
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        17179  5 -    104932 T-T-------TC-----------T
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     5360  4 -     12809 T-T--------T-----------T
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 150468  5 +    154973 T-T-------TT-----------T
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                163724  6 +    265003 T-T------TTT-----------T
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  6480  5 -     19904 T-T-------TT-----------T
i Moschus_moschiferus.MosMos_scaffold_78805             I 26 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  150552  5 -    168139 T-T-------TT-----------T
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          24658  5 -    100666 T-T-------TT-----------T
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70772084  3 +  92629107 T-G--------T------------
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75494138  3 +  98207768 T-G--------T------------
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67560890  3 +  89017189 T-G--------T------------
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74336864  3 +  97876770 T-G--------C------------
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             15107  4 +     98495 T-T--------T-----------T
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 14 C 0
s Mustela_putorius.JH417978.1                             4428915  5 -  28371801 T-T-------TC-----------T
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     94076  4 -    117718 C-T--------T-----------T
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 I 1
s Myotis_brandtii.KE161952.1                               971531  5 +   8389877 T-T-------TT-----------T
i Myotis_brandtii.KE161952.1                            I 1 C 0
s Myotis_davidii.KB114863.1                               5022951  5 +   6462685 T-T-------TT-----------T
i Myotis_davidii.KB114863.1                             I 1 C 0
s Myotis_lucifugus.GL429887.1                             3469035  5 -   3747815 T-T-------TT-----------T
i Myotis_lucifugus.GL429887.1                           I 1 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        14276  5 +     66751 T-T-------TT-----------T
i Myotis_myotis.MyoMyo_scaffold_6123                    I 1 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             7875  4 -      8794 T-T--------T-----------T
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            240853  3 -    362372 C-G--------T------------
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4490577  5 -  14209539 T-T-------TC-----------T
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3955059  5 -   4490290 t-t-------tt-----------t
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  50785  7 +     94413 T-T-----TTTT-----------T
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_762468                             478  4 -      2755 T-T--------T-----------A
i Nomascus_annamensis.k141_762468                       C 0 C 0
s Nomascus_concolor.k141_70405                               1098  4 +      1153 T-T--------T-----------A
i Nomascus_concolor.k141_70405                          I 42 n 4
s Nomascus_gabriellae.k141_1400361                           1029  4 -      2203 T-T--------T-----------A
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_453                             6341  4 +     12787 T-T--------T-----------A
i Nomascus_siki_b.tarseq_453                        C 0 C 0
s Nomascus_siki_a.k141_421408                                   943  4 +     16235 T-T--------T-----------A
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                38307  5 +   3668941 T-T-------TC-----------T
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65572186  4 -  95554990 T-T--------T-----------T
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_771591                            15596  4 +     16181 T-T--------T-----------T
i Nycticebus_coucang.k141_771591                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65680374  4 +  89412551 T-T--------T-----------T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            5000157  2 -  23139505 t-t---------------------
i Ochotona_princeps.JH802095.1                          C 0 I 7
s Octodon_degus.JH651621.1                                3689565  4 +  10294119 t-t--------t-----------t
i Octodon_degus.JH651621.1                              C 0 I 1
s Odobenus_rosmarus.KB229369.1                             685280  5 -   3126709 T-T-------TC-----------T
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1083910  5 +   1425656 t-t-------tt-----------t
i Odocoileus_virginianus.KZ101650.1                     I 26 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         41986  5 +     78940 t-t-------tt-----------t
i Okapia_johnstoni.LVCL01S0017931.1                     I 26 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  130650  3 +    145789 G-G--------T------------
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  43346  3 +     62360 G-G--------T------------
i Onychomys_torridus.OnyTor_scaffold_12578              I 18 C 0
s Orcinus_orca.KB316965.1                                 7228733  5 -   7562323 t-t-------tt-----------t
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              64439  5 -     66828 TTT--------T-----------C
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 I 4
s Oryctolagus_cuniculus.CM000803.1                      141884128  2 + 163896628 T-T---------------------
i Oryctolagus_cuniculus.CM000803.1                      C 0 I 1
s Otocyon_megalotis.JAEUCK010005121.1                      315445  5 -    505867 T-T-------TC-----------T
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        5422  4 -     53940 T-T--------T-----------T
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18013391  4 -  38779656 t-t--------t-----------t
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134082917  5 - 275406953 t-t-------tt-----------t
i Ovis_aries.CM001582.2                                 I 26 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      84151  5 +    140051 T-T-------TT-----------T
i Ovis_canadensis.OviCan_scaffold_6251                  I 26 C 0
s Pan_paniscus.CM003386.1                               127578765  4 - 205426864 T-T--------T-----------A
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120155925  4 - 196562556 T-T--------T-----------A
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  40167  5 +    295523 T-T-------TC-----------T
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3643982  5 +  18214204 T-T-------TC-----------T
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5033630  5 -   6340057 T-T-------TC-----------T
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1071788  5 -   1292953 t-t-------tt-----------t
i Pantholops_hodgsonii.KE114631.1                       I 27 C 0
s Papio_anubis.CM001492.2                               188160653  4 - 188283584 T-T--------T-----------A
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              3743  4 +     25005 T-T--------T-----------A
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47518025  4 +  47705337 T-T--------T-----------A
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 72016  4 -    104429 T-T--------T-----------A
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   10548  4 +     14967 T-T--------T-----------A
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 6413  4 -      7628 T-T--------T-----------A
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    121654  5 -    135482 T-T-------TC-----------T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          11086  4 -     23713 T-T--------T-----------T
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           12237  4 +     61070 T-T--------T-----------T
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       2507  4 +     49596 T-T--------T-----------T
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4955712  3 -   8017169 G-G--------T------------
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              3200  5 +      8220 T-T-------TT-----------T
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            99814  5 +    112873 T-T-------TT-----------T
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           9671  5 +     21690 T-T-------TT-----------T
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       26348  4 +     44506 T-T--------T-----------A
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        26561  4 +     67491 T-T--------T-----------A
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      16800  4 -     98129 T-T--------T-----------A
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     26401  4 +    147771 T-T--------T-----------A
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         3036  4 -     43940 T-T--------T-----------A
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          7119  4 -     55515 T-T--------T-----------A
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         26473  4 +    152463 T-T--------T-----------A
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       4281  4 -    119457 T-T--------T-----------A
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         16196  4 +    134592 T-T--------T-----------A
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          26783  4 -     75465 T-T--------T-----------A
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              191396  4 -    373494 T-T--------T-----------A
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19812043  4 +  19899266 T-T--------T-----------A
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                4205  5 -      9567 TGT--------T-----------T
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6853019  4 +  12164890 T-T--------T-----------T
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     21828  4 -     30946 N-N--------N-----------N
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         8105  4 +     11805 T-G--------T-----------T
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           47439  4 +     52369 T-G--------T-----------T
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         39826  4 -     44753 T-G--------T-----------T
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            21749  4 +     27322 T-G--------T-----------T
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       21398  4 -     53241 T-G--------T-----------T
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         43661  4 -     48185 T-G--------T-----------T
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           38504  3 +     77221 T-G--------T------------
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            6367  6 -     27784 t-t------ttt-----------t
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        250566  5 -    344369 T-T-------TC-----------T
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Puma_concolor.QAVW01000427.1                          131540279  5 - 161321710 T-T-------TC-----------T
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                20775  5 +     68503 T-T-------TT-----------T
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 26 C 0
s Rattus_norvegicus.chr11                                13917923  3 +  90463843 T-G--------T------------
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1792879  5 +   2252614 t-t-------tt-----------t
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                      1186  5 -      4338 T-T-------TT-----------T
i Saiga_tatarica.SaiTat_scaffold_371890                 I 26 C 0
s Saimiri_boliviensis.NW_024100938.1                     15676804  4 -  43202129 T-T--------T-----------A
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        8717  4 +     34089 T-T--------T-----------A
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              8657  4 -     60842 T-T--------T-----------A
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              8751  4 +     67014 T-T--------T-----------A
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              8728  4 +     60816 T-T--------T-----------A
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 8665  4 -     76454 T-T--------T-----------A
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17345450  4 -  30362882 T-T--------T-----------A
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         24771  4 -     62485 T-T--------T-----------A
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  105713  3 -    120886 G-G--------T------------
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            23817  4 +    739146 T-T--------T-----------T
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17774052  4 -  27805282 t-t--------t-----------t
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2244313 13 +   2842873 t-t--------ttcttctttt--t
i Spermophilus_dauricus.KZ294190.1                      I 18 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             239349  5 -    276980 T-T-------TC-----------T
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            33469  5 +     62062 T-T-------TT-----------T
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189275254  6 + 218635234 T-T------TTT-----------T
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        19066  4 -  13920577 T-T--------T-----------A
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                2598  5 +     20549 T-T-------TT-----------G
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               17548  4 +     45698 T-T--------T-----------T
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      811059  5 +   1148477 T-T-------TT-----------T
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  61701  5 +     99546 T-T-------TT-----------T
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194012186  4 - 194193292 T-T--------T-----------A
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                   656  4 -      3104 T-T--------T-----------T
i Tolypeutes_matacus.TolMat_scaffold_475685             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  138367  2 -    259118 -----------G-----------T
i Tonatia_saurophila.TonSau_scaffold_3334               I 2 C 0
s Trichechus_manatus.JH594618.1                          16090094  5 +  31416278 TTT--------T-----------T
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2798023  8 -   3938065 t-a--------tt-tt-t-----t
i Tupaia_chinensis.KB320831.1                           I 12 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    9954  9 +     13056 T-T--------T------TTTTTT
i Tupaia_tana.TupTan_flattened_line_68454               I 12 C 0
s Tursiops_truncatus.MRVK01000923.1                      69317462  5 -  96451834 t-t-------tt-----------t
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Ursus_maritimus.KK498671.1                              6520982  5 +  28682327 T-T-------GC-----------T
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  9662  4 -     20643 T-T--------T-----------T
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             29197  4 -     33872 T-T--------T-----------T
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1528482  5 -   2331223 t-t-------tt-----------t
i Vicugna_pacos.KN269600.1                              I 14 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                144672  5 -    281493 T-T-------TC-----------T
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       131810  4 -    134049 T-T--------T-----------T
i Xerus_inauris.XerIna_scaffold_7898                    I 14 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        220138  5 -    227762 T-T-------TC-----------T
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            2210  5 -     13665 T-T-------TT-----------T
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Petromus_typicus.PetTyp_scaffold_33007                    17492  0 -     36578 C
e Uropsilus_gracilis.UroGra_scaffold_4115                     340  0 +    136657 C
e Tragulus_javanicus.TraJav_scaffold_14717                   9488 743 +     90398 I
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   39882  0 -    114521 C
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Equus_przewalskii.ATBW01073585.1                          16581  0 +     92910 C
e Equus_caballus.CM000402.2                              13355091  0 +  41866177 C
e Equus_asinus.JREZ01000062.1                             5856591  0 -   7175178 C
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Condylura_cristata.JH655880.1                          60622406  0 +  78930452 C
e Artibeus_jamaicensis.ArtJam_scaffold_41619                11226  0 -     29036 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           21485  1 -    119109 I
e Zapus_hudsonius.ZapHud_scaffold_256618                      408  0 -      2259 C
e Jaculus_jaculus.JH725517.1                              8577673  0 +  11848649 C
e Allactaga_bullata.AllBul_scaffold_141108                    666  0 -      7259 C
e Trachypithecus_pileatus.k141_1022309                       5226  0 +     13828 C
e Trachypithecus_phayrei.ctg3                            44662914  0 -  44834318 C
e Trachypithecus_obscurus.k141_1115109                       8130  0 -     28054 C
e Trachypithecus_melamera.k141_699241                        2986  0 -     24393 C
e Trachypithecus_leucocephalus.k141_381681                   3005  0 +     12481 C
e Trachypithecus_laotum.k141_760702                          4719  0 +     14371 C
e Trachypithecus_hatinhensis.k141_504423                     6067  0 -     15592 C
e Trachypithecus_germaini.k141_868450                        3883  0 -     11566 C
e Trachypithecus_geei.k141_670367                           46082  0 -     54611 C
e Trachypithecus_francoisi.k141_768164                       4689  0 -     14244 C
e Trachypithecus_cristatus.k141_1011511                      5261  0 -     12939 C
e Trachypithecus_crepusculus.k141_1588528                   23360  0 -     32910 C
e Trachypithecus_auratus.k141_738098                        29800  0 +     38948 C
e Tarsius_wallacei.k141_48636                               64696  0 +     65473 C
e Tarsius_lariang.k141_609102                               31387  0 +     42269 C
e Semnopithecus_vetulus.k141_1143185                        16479  0 +     30600 C
e Semnopithecus_schistaceus.k141_387461                     33457  0 +     42640 C
e Semnopithecus_priam.k141_410937                           40312  0 +     46263 C
e Semnopithecus_johnii.k141_785014                         121532  0 +    130994 C
e Semnopithecus_hypoleucos.k141_761524                      11528  0 +     20762 C
e Semnopithecus_entellus.k141_1572367                        6153  0 +     15331 C
e Rhinopithecus_strykeri.ctg4                            44859307  0 -  45163003 C
e Rhinopithecus_bieti.k119_554384                            2917  0 -     17045 C
e Pygathrix_nigripes_a.k141_101123                             8537  0 +     18040 C
e Pygathrix_nigripes_b.ctg79                                 6809148  0 +   6970761 C
e Pygathrix_cinerea.k141_374971                             32651  0 +     56732 C
e Presbytis_mitrata.k141_860013                              8661  0 +     14865 C
e Presbytis_comata.k141_672698                               8546  0 -     15069 C
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000036.1               26743271  0 +  26888534 C
e Piliocolobus_kirkii.k141_929665                            4788  0 +      7694 C
e Piliocolobus_gordonorum.k141_1270531                       5421  0 -     17985 C
e Piliocolobus_badius.k141_1987485                           4802  0 -      5908 C
e Nasalis_larvatus.k141_153429                              11264  0 +     48152 C
e Dolichotis_patagonum.DolPat_scaffold_14102                40816  1 -     73477 I
e Colobus_polykomos.k141_1406057                            19335  0 +     23629 C
e Colobus_guereza.LG08                                  147667351  0 + 156195979 C
e Colobus_angolensis.KN985967.1                          10889423  0 +  10971483 C
e Cephalopachus_bancanus.k141_702587                        12545  0 +     21754 C
e Cavia_tschudii.CavTsc_scaffold_488                       180030  1 +    436027 I
e Cavia_porcellus.DS562889.1                             15801858  1 -  24440124 I
e Cavia_aperea.AVPZ01000278.1                            15789919  1 -  24422027 I
e Carlito_syrichta.NW_007248099.1                          313530  0 +    345090 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               17791 44 +    209709 a---ctg-tcGG-AA-AATT-GTGTT--TC-TCTTGTT-----------------AGA---A-TAG-AG--CC-CAAT--T
s Acinonyx_jubatus.LLWD01000356.1                         2039758 43 +   3721120 ----CCG-ATTG-AA-AAAT-TTGGT--TC-CTTGGGA-----------------GCA---G-AAG-CG--Tc-tagt--t
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    118010 23 -    189883 ----tgt-ataa-aa-aact-gagtt--at-atc-----------------------------------------------
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 I 110
s Ailuropoda_melanoleuca.LNAT01000321.1                  10663719 43 +  23371972 ----CTG-ATTG-AA-AAAT-TTGGT--TC-CCTGGGG-----------------GCA---G-AAA-AG--TC-TAGT--T
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7100248 43 -  16596857 ----CTG-ATTG-AG-AAAT-TTGGT--TC-CCTGGGG-----------------GCA---G-AAG-AC--Tc-gaat--t
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_141108                    666 25 -      7259 -----------------------------C-CCAGGTT-----------------GCA---A-TAA-GA--CT-CAGC-TT
i Allactaga_bullata.AllBul_scaffold_141108              C 0 I 1
s Allenopithecus_nigroviridis.k141_2469532                   5666 44 -     60446 T---CTG-ATGG-AA-AATT-ATGTT--TC-TCTTGTT-----------------AGA---A-TAG-AG--CC-CAAT--T
i Allenopithecus_nigroviridis.k141_2469532              C 0 I 17
s Allochrocebus_lhoesti.k141_3566948                         6383 44 -     29318 T---CTG-ATGG-AA-AATT-ATGTT--TC-TCTTGTT-----------------AGA---A-TAG-AG--CC-CAGT--T
i Allochrocebus_lhoesti.k141_3566948                    C 0 I 32
s Allochrocebus_preussi.k141_1108977                         5321 44 +     38766 T---CTG-ATGG-AA-AATT-ATGTT--TC-TCTTGTT-----------------AGA---A-TAG-AG--CC-CAGT--T
i Allochrocebus_preussi.k141_1108977                    C 0 I 17
s Allochrocebus_solatus.k141_371672                          6277 44 -     80423 T---CTG-ATGG-AA-AATT-ATGTT--TC-TCTTGTT-----------------AGA---A-TAG-AG--CC-CAGT--T
i Allochrocebus_solatus.k141_371672                     C 0 I 32
s Alouatta_belzebul.k141_276091                              1260 44 +     19852 T---CTG-ATGG-AC-AATT-GTGTT--TC-CCTTTTT-----------------AAA---A-CAG-AG--CT-CAGT--T
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                3504 44 -     12443 T---CTG-ATGG-AC-AATT-GTGTT--TC-CCTTTTT-----------------AAA---A-TAG-AG--CC-CAGT--T
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                              803 44 +      5070 T---CTG-ATGG-AC-AATT-GTGTT--TC-CCTTTTT-----------------AAA---A-CAG-AG--CT-CAGT--T
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                  548 44 -      1641 T---CTG-ATGG-AC-AATT-GTGTT--TC-CCTCTTT-----------------AAA---A-TAG-AG--CC-CAGT--T
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          3287 44 -     24210 T---CTG-ATGG-AC-AATT-GTGTT--TC-CCTTTTT-----------------AAA---A-TAG-AG--CC-CAGT--T
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           29869 44 -     30219 T---CTG-ATGG-AC-AATT-GTGTT--TC-CCTTTTT-----------------AAA---A-TAG-AG--CC-CAGT--T
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_405616                              5705 44 +     16794 T---CTG-ATGG-AC-AATT-GTGTT--TC-CCTTTTT-----------------AAA---A-TAG-AG--CC-CAGT--T
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                             837 44 -      1470 T---CTG-ATGG-AC-AATT-GTGTT--TC-CCTCTTT-----------------AAA---A-TAG-AG--CC-CAGT--T
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             4982 44 -      9835 T---CTG-ATGG-AC-AATT-GTGTT--TC-CCTCTTT-----------------AAA---A-TAG-AG--CC-CAGT--T
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3525787 43 +   4113121 ----cag-attG-GA-AATT-TTGGT--TC-TCTACTT-----------------GCA---G-GAG-AG--TT-GTTT--C
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      392813 42 -    631301 ----ATG-ATTG-AA-AATT-TGGGG--GT-TTTGATT-----------------ACA---A-AG--AG--TT-TAAT--T
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             3220 43 +     55446 ----CAG-ATTG-TA-GATT-TTGGT--TC-TCTACTT-----------------GCA---G-GAG-AT--GT-GTTT--C
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 66591 44 +     78111 T---CTG-ATGG-AA-AATT-GTGTT--TC-TCTTTTT-----------------AAA---A-TAG-AG--CC-CAGT--T
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            9539 44 +     22701 T---CTG-ATGG-AA-AATT-GTGTT--TC-TCTTTTT-----------------AAA---A-TAG-AG--CC-CAGT--T
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5753496 44 +   9889416 T---CTG-ATGG-AA-AATT-gtgtt--tc-ccttttt-----------------aaa---a-tag-ag--cc-cagt--t
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                            10095 44 -    104377 T---CTG-ATGG-AA-AATT-GTGTT--TC-TCTTTTT-----------------AAA---A-TAG-AG--CC-CAGT--T
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                              10102 44 +     23246 T---CTG-ATGG-AA-AATT-GTGTT--TC-TCTTTTT-----------------AAA---A-TAG-AG--CC-CAGT--T
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     2632 43 +     11424 T---TTG-ATGG-AA-AA-T-ACATT--TC-CTTAGTT-----------------GCT---G-TAG-AG--TC-CAGT--T
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        6717 44 +      9265 C---CTA-ATGG-AA-AATT-GTGTT--TC-CTTGGTT-----------------TCA---A-TAG-AG--TC-TAGT--T
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                11226 34 -     29036 --------------A-AATT-TGGGG--TT-TTGGGTT-----------------ACA---A-AA--AG--TT-TAAT--T
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9543390 44 +  39197703 T---CTG-ATGG-AC-AATT-GTGTT--TC-CCTTTTT-----------------AAA---A-CAG-AG--CC-CAGT--T
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             64664 44 +     85812 T---CTG-ATGG-AC-AATT-GTGTT--TC-CCTTTTT-----------------AAA---A-CAG-AG--CC-CAGT--T
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                15677 44 +     89302 T---CTG-ATGG-AC-AATT-GTGTT--TC-CCTTTTT-----------------AAA---A-CAG-AG--CC-CAGT--T
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             20178 44 -     58268 T---CTG-ATGG-AC-AATT-GTGTT--TC-CCTTTTT-----------------AAA---A-CAG-AG--CC-CAGT--T
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             68172 44 +    119057 T---CTG-ATGG-AC-AATT-GTGTT--TC-CCTTTTT-----------------AAA---A-CAG-AG--CC-CAGT--T
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              10141 44 -     25888 T---CTG-ATGG-AC-AATT-GTGTT--TC-CCTTTTT-----------------AAA---A-CAG-AG--CC-CAGT--T
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                11201 44 -     16375 T---CTG-GTGG-AA-AATT-ATGTT--TC-CTTGATT-----------------GTA---G-TAG-AG--AC-CAGT--T
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               4817 44 +      6337 T---CTG-GTGG-AA-AATT-ATGTT--TC-CTTGATT-----------------GTA---G-TAG-AG--AC-CAGT--T
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26384261 37 +  51448160 ----CTG-ATTG-AA-AATT-TTGGT--TC-TCTGCTT-----------------GCA---C-AAA-AT--T---------
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        9434 37 -     13118 ----CTG-ATTG-AA-AATT-TTGGT--TC-TCTGCTT-----------------GCA---C-AAA-AT--T---------
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   48251 43 -     72089 ----CAG-ATTG-GA-GATT-TTGGT--TC-TCTACTT-----------------GCC---G-GAG-AG--TT-GTTT--C
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   302395 43 -   6870073 ----CAG-ATTG-GA-GATT-TTGGT--TC-TCTACTT-----------------GCA---G-GAG-AG--TT-GTTT--C
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22956493 43 + 161108492 ----CAG-ATTG-GA-GATT-TTGGT--TC-TCTACTT-----------------GCA---G-GAG-AG--TT-GTTT--C
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     418734 43 +    998990 ----cag-attG-GA-AATT-TTGGT--TC-TCTACTT-----------------GCA---G-GAG-AG--TT-GTTT--C
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22665147 43 + 158972876 ----CAG-ATTG-GA-GATT-TTGGT--TC-TCTACTT-----------------GCA---G-GAG-AG--TT-GTTT--C
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               674901 43 +   1914593 ----CAG-ATTG-GA-GATT-TTGGT--TC-TCTACTC-----------------GCA---G-GAG-AG--TT-GTTT--C
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               118044 44 -    171031 T---CTG-ATGG-AA-AATT-GTGTT--TC-CCTTTTT-----------------AAA---A-TAG-AG--CC-CAGT--T
i Cacajao_ayresi.k141_724503                            C 0 I 6
s Cacajao_calvus.k141_96166                                 17064 44 +    125063 T---CTG-ATGG-AA-AATT-GTGTT--TC-CCTTTTT-----------------AAA---A-TAG-AG--CC-CAGT--T
i Cacajao_calvus.k141_96166                             C 0 I 6
s Cacajao_hosomi.k141_303789                                19111 44 -    216513 T---CTG-ATGG-AA-AATT-GTGTT--TC-CCTTTTT-----------------AAA---A-TAG-AG--CC-CAGT--T
i Cacajao_hosomi.k141_303789                            C 0 I 6
s Cacajao_melanocephalus.k141_1160263                       11654 44 -    134917 T---CTG-ATGG-AA-AATT-GTGTT--TC-CCTTTTT-----------------AAA---A-TAG-AG--CC-CAGT--T
i Cacajao_melanocephalus.k141_1160263                   C 0 I 6
s Camelus_bactrianus.KN276303.1                           3223379 45 -   8989139 ----ctg-attt-aa-aaac-ttGGT--TC-TCTGCTT-----------------GCA---G-AAG-AG--TC-tagtctt
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           401080 45 -  15254737 ----ctg-attt-aa-aaac-ttGGT--TC-TCTGCTT-----------------GCA---G-AAG-AG--TC-tagtctt
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2976817 45 +   6889770 ----ctg-attt-aa-aaac-ttGGT--TC-TCTGCTT-----------------GCA---G-AAG-AG--TC-tagtctt
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11526597 43 +  39901454 ----CTG-ATTA-AA-AAAA-TTGGT--TC-CCTGGGG-----------------GCA---G-AAG-AG--TC-TAGT--T
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   21571 43 +     87036 ----CTG-ATTA-AA-AAAA-TTGGT--TC-CCTGGGG-----------------GCA---G-AAG-AG--TC-TAGT--T
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11273280 43 -  35597290 ----ctg-atta-aa-aaaa-ttggT--TC-CCTGGGG-----------------GCA---G-AAG-AG--TC-tagt--t
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11095991 43 +  39895921 ----ctg-atta-aa-aaaa-ttggT--TC-CCTGGGG-----------------GCA---G-AAG-AG--TC-tagt--t
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16462776 43 -  44759192 ----ctg-atta-aa-aaaa-ttggT--TC-CCTGGGG-----------------GCA---G-AAG-AG--TC-tagt--t
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21333731 43 + 157394656 ----cag-attg-GA-GATT-TTGGT--TC-TCTACGT-----------------GCA---G-GAG-AG--TT-GTTT--C
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135712086 43 - 157403528 ----CAG-ATTG-GA-GATT-TTGGT--TC-TCTACGT-----------------GCA---G-GAG-AG--TT-GTTT--C
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_529800                   459 43 -      2320 C----TG-GCAG-AA-ACTT-GTGTT--TC-CCAGGTT-----------------GCT---G-TAG-AG--TT-TAGT--T
i Capromys_pilorides.CapPil_scaffold_529800             I 1 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               62233 43 +     67245 ----CTG-ATTG-AAAAATT-TTGGT--TT-TTTGGTT-----------------ACA---A-AA--CA--TT-TAAT--T
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_1326                      224 45 -    202837 TTT-CTC-ATG--AA-AATT-GTGTT--TT-TCTGATT-----------------GCA---A-TAG-AA--CA-CAGT--T
i Castor_canadensis.CasCan_scaffold_1326                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   162905 43 -    276539 ----CCA-ATTT-AA-AACT-TTGGT--TC-TCTGCTT-----------------GCA---G-AAG-AG--TC-CAGT--T
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15789920 43 -  24422027 t----tg-gcAG-AA-AATT-GTCTT--CC-CCTGGTT-----------------GAT---A-CAG-GG--TT-TAGT--T
i Cavia_aperea.AVPZ01000278.1                           I 1 C 0
s Cavia_porcellus.DS562889.1                             15801859 43 -  24440124 t----tg-gcAG-AA-AATT-GTCTT--CC-CCTGGTT-----------------GAT---A-CAG-GG--TT-TAGT--T
i Cavia_porcellus.DS562889.1                            I 1 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       180031 43 +    436027 T----TG-GCAG-AA-AATT-GTCTT--CC-CCTGGTT-----------------GAT---A-CAG-GG--TT-TAGT--T
i Cavia_tschudii.CavTsc_scaffold_488                    I 1 C 0
s Cebus_albifrons.Contig22                               18895766 44 -  29618158 T---CTG-ATGG-AA-AATT-GTGTT--TC-CCCTTTT-----------------AAA---A-TAA-AG--CC-CAGT--T
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                12416 44 -     26817 T---CTG-ATGG-AA-AATT-GTGTT--TC-CCTTTTT-----------------AAA---A-TAA-AG--CC-CAGT--T
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                16660 44 +     25043 T---CTG-ATGG-AA-AATT-GTGTT--TC-CCTTTTT-----------------AAA---A-TAA-AG--CC-CAGT--T
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4367831 43 +   7569818 ----ata-attg-aa-aatt-ttgGT--TC-CCTGGTT-----------------GCA---G-AAG-AG--TC-CAGT--T
i Ceratotherium_simum.JH767818.1                        C 0 I 3
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         7588 43 -      9338 ----ATA-ATTG-AA-AATT-TTGGT--TC-CCTGGTT-----------------GCA---G-AAG-AG--TC-CAGT--T
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 I 3
s Cercocebus_atys.KQ010443.1                              6559607 44 +   6739814 T---CTG-ATGG-AA-AATT-ATGTT--TC-TCTTGTT-----------------AGA---A-TAG-AG--Cc-caat--t
i Cercocebus_atys.KQ010443.1                            C 0 I 17
s Cercocebus_chrysogaster.k141_2328246                      31084 44 +     60454 T---CTG-ATGG-AA-AATT-ATGTT--TC-TCTTGTT-----------------AGA---A-TAG-AG--CC-CAAT--T
i Cercocebus_chrysogaster.k141_2328246                  C 0 I 32
s Cercocebus_lunulatus.k141_4634644                          6288 44 -     21101 T---CTG-ATGG-AA-AATT-ATGTT--TC-TCTTGTT-----------------AGA---A-TAG-AG--CC-CAAT--T
i Cercocebus_lunulatus.k141_4634644                     C 0 I 17
s Cercocebus_torquatus.k141_3969582                         63598 44 -    107033 T---CTG-ATGG-AA-AATT-ATGTT--TC-TCTTGTT-----------------AGA---A-TAG-AG--CC-CAAT--T
i Cercocebus_torquatus.k141_3969582                     C 0 I 17
s Cercopithecus_ascanius.k141_4123525                        6461 44 -     17608 T---CTG-ATGG-AA-AATT-ATGTT--TC-TCTTGTT-----------------AGA---A-TAG-AG--CC-CAAT--T
i Cercopithecus_ascanius.k141_4123525                   C 0 I 32
s Cercopithecus_cephus.k141_3893260                          3626 44 +     45019 T---CTG-ATGG-AA-AATT-ATGTT--TC-TCTTGTT-----------------AGA---A-TAG-AG--CC-CAAT--T
i Cercopithecus_cephus.k141_3893260                     C 0 I 17
s Cercopithecus_diana.k141_2561715                           3902 44 +     15177 T---CTG-ATGG-AA-AATT-ATGTT--TC-TCTTGTT-----------------AGA---A-TAG-AG--CC-CAAT--T
i Cercopithecus_diana.k141_2561715                      C 0 I 17
s Cercopithecus_hamlyni.k141_129805                          6508 44 +     16677 T---CTG-ATGG-AA-AATT-ATGTT--TC-TCTTGTT-----------------AGA---A-TAG-AG--CC-CAAT--T
i Cercopithecus_hamlyni.k141_129805                     C 0 I 32
s Cercopithecus_lowei.k141_623764                           28698 44 +     35983 T---CTG-ATGG-AA-AATT-ATGTT--TC-TCTTGTT-----------------AGA---A-TAG-AG--CC-CAAT--T
i Cercopithecus_lowei.k141_623764                       C 0 I 32
s Cercopithecus_albogularis.ctg51                              11995229 44 +  12117833 T---CTA-ATGG-AA-AATT-ATGTT--TC-TCTTGTT-----------------AGA---A-TAG-AG--CC-CAAT--T
i Cercopithecus_albogularis.ctg51                             C 0 I 32
s Cercopithecus_mona.ctg12                               46482205 44 +  46592721 T---CTG-ATGG-AA-AATT-ATGTT--TC-TCTTGTT-----------------AGA---A-TAG-AG--CC-CAAT--T
i Cercopithecus_mona.ctg12                              C 0 I 17
s Cercopithecus_neglectus.k141_2169300                        322 44 -     27215 T---CTG-ATGG-AA-AATT-ATGTT--TC-TCTTGTT-----------------AGA---A-TAG-AG--CC-CAAT--T
i Cercopithecus_neglectus.k141_2169300                  C 0 I 17
s Cercopithecus_nictitans.k141_1129315                       6522 44 +     35577 T---CTG-ATGG-AA-AATT-ATGTT--TC-TCTTGTT-----------------AGA---A-TAG-AG--CC-CAAT--T
i Cercopithecus_nictitans.k141_1129315                  C 0 I 17
s Cercopithecus_petaurista.k141_64532                        6316 44 -     25661 T---CTG-ATGG-AA-AATT-ATGTT--TC-TCTTGTT-----------------AGA---A-TAG-AG--CC-CAAT--T
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        6488 44 -     17744 T---CTG-ATGG-AA-AATT-ATGTT--TC-TCTTGTT-----------------AGA---A-TAG-AG--CC-CAAT--T
i Cercopithecus_pogonias.k141_3109732                   C 0 I 32
s Cercopithecus_roloway.k141_2263608                        25857 44 +     37128 T---CTG-ATGG-AA-AATT-ATGTT--TC-TCTTGTT-----------------AGA---A-TAG-AG--CC-CAAT--T
i Cercopithecus_roloway.k141_2263608                    C 0 I 32
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           4820 32 -      6963 ----CTG-ATGG-GA-TATT-TTGTT--TC-CCTGGTT-----------------GAA---G-T-----------------
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 I 8
s Cheirogaleus_major.k141_1157592                           63410 44 -     68416 T---CTG-GTGG-AA-AATT-ATGTT--TC-CTTGGTT-----------------GCA---G-GAG-AG--AC-CAGT--T
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                           12530 44 +     13308 T---CTG-GTGG-AA-AATT-ATGTT--TC-TTTGGTT-----------------GCA---G-GAG-AG--AC-CAGT--T
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             9703 44 -     18223 T---CTG-ATGG-AA-AATT-GTGTT--TC-CGTTTTT-----------------AAA---A-TAG-AG--CC-CAGT--T
i Cheracebus_lucifer.k141_619653                        C 0 I 4
s Cheracebus_lugens.k141_996499                              1441 44 +    188999 T---CTG-ATGG-AA-AATT-GTGTT--TC-CGTTTTT-----------------AAA---A-TAG-AG--CC-CAGT--T
i Cheracebus_lugens.k141_996499                         C 0 I 4
s Cheracebus_regulus.k141_2128895                           45740 44 +     57117 T---CTG-ATGG-AA-AATT-GTGTT--TC-CGTTTTT-----------------AAA---A-TAG-AG--CC-CAGT--T
i Cheracebus_regulus.k141_2128895                       C 0 I 4
s Cheracebus_torquatus.k141_315545                          50420 44 +     54541 T---CTG-ATGG-AA-AATT-GTGTT--TC-CGTTTTT-----------------AAA---A-TAG-AG--CC-CAGT--T
i Cheracebus_torquatus.k141_315545                      C 0 I 4
s Chinchilla_lanigera.JH721867.1                         15964611 43 +  43084221 t----tg-gaaa-aa-aatt-gtgtt--tc-CCTTGTT-----------------CCT---G-TAG-GG--TT-TAGC--T
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         75223 44 +    196370 T---CTG-ATGG-AA-AACT-GTGTT--TC-CCTTTTT-----------------AAA---A-TAG-AG--CC-CAGT--T
i Chiropotes_israelita.k141_1189915                     C 0 I 6
s Chiropotes_sagulatus.k141_773804                          19404 44 +     40510 T---CTG-ATGG-AA-AACT-GTGTT--TC-CCTTTTT-----------------AAA---A-TAG-AG--CC-CAGT--T
i Chiropotes_sagulatus.k141_773804                      C 0 I 6
s Chlorocebus_aethiops.ctg22                             15144042 44 -  15256731 T---CTG-ATGG-AA-AATT-ATGTT--TC-TCTTGTT-----------------AGA---A-TAG-AG--CC-CAAT--T
i Chlorocebus_aethiops.ctg22                            C 0 I 17
s Chlorocebus_pygerythrus.k141_1486215                      38506 44 -     53260 T---CTG-ATGG-AA-AATT-ATGTT--TC-TCTTGTT-----------------AGA---A-TAG-AG--CC-CAAT--T
i Chlorocebus_pygerythrus.k141_1486215                  C 0 I 32
s Chlorocebus_sabaeus.CM001963.2                        101149065 44 + 101219884 T---CTG-ATGG-AA-AATT-ATGTT--TC-TCTTGTT-----------------AGA---A-TAG-AG--Cc-caat--t
i Chlorocebus_sabaeus.CM001963.2                        C 0 N 0
s Choloepus_didactylus.ChoDid_scaffold_36182                18931 32 -     21363 ----CTG-ATGG-GA-AATT-TGGGT--TC-CCCGGTT-----------------GAA---G-A-----------------
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 I 8
s Choloepus_hoffmanni.KN194586.1                           764235 32 +    964067 ----CTG-ATGG-GA-AATT-TGGGT--TC-CCCGGTT-----------------GAA---G-A-----------------
i Choloepus_hoffmanni.KN194586.1                        C 0 I 8
s Chrysochloris_asiatica.ChrAsi_scaffold_629495              2472 44 -      3120 ----TCTTTTGG-AA-ACTT-TTGCT--TC-CTAGGTT-----------------GTA---C-CTA-CA--TC-CAGC--T
i Chrysochloris_asiatica.ChrAsi_scaffold_629495         C 0 C 0
s Colobus_angolensis.KN983490.1                            283767  8 +    886210 --------------------------------------------------------------------G--CC-CAGT--G
i Colobus_angolensis.KN983490.1                         n 0 C 0
s Colobus_guereza.LG08                                   96946656  8 - 156195979 --------------------------------------------------------------------G--CC-CAGT--G
i Colobus_guereza.LG08                                  n 0 C 0
s Colobus_polykomos.k141_688201                               319  8 +      1908 --------------------------------------------------------------------G--CC-CAGT--G
i Colobus_polykomos.k141_688201                         n 0 C 0
s Condylura_cristata.JH655880.1                          60622406 30 +  78930452 -----------------------gtt--tc-cCAGGTT-----------------GCA---A-AAG-ggaaca-tttt--t
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         2758 43 -      5782 ----CTG-ATTG-AA-AATT-TTGGT--TT-CCTGCTG-----------------ACA---A-AA-GAG--TT-CAAT--T
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 I 5
s Cricetomys_gambianus.CriGam_scaffold_949                 282896 23 -    399297 ----CTT-ATGG-AA-AACT-GTGTT--GC-ACC-----------------------------------------------
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 I 6
s Cricetulus_griseus.LT883672.1                          53035253 23 +  72327488 ----CCT-ATGG-TA-AACT-GGGTT--GT-ACC-----------------------------------------------
i Cricetulus_griseus.LT883672.1                         C 0 I 7
s Crocidura_indochinensis.CroInd_scaffold_27484              2333 40 -     22648 ----AAA-AATA-AA-ATTT-TT------C-CCTGGTT-----------------GCA---A-AAA-AG--TCCCAGT--T
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            57744 43 -     70449 ----CTG-ATTG-AA-AAAT-TTGGT--TC-CCTGGGG-----------------GCA---G-AAG-AG--TC-TAGT--T
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 I 2
s Ctenodactylus_gundi.CteGun_scaffold_447                  214508 29 -    956709 C---ATG-ATGG-AA-AATA-GGCAC--TC-CCTCATT-----------------G-------------------------
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 I 10
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 34579 43 -     67205 C----TG-GCAG-AA-CTTT-GTGTT--CT-CCTAGTT-----------------GCT---G-TAG-GG--TT-TAGT--T
i Ctenomys_sociabilis.CteSoc_scaffold_19489             I 1 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                21101 43 +     26546 C----TG-TCAG-AA-AATT-GTGTT--CC-CTTGGTT-----------------TCT---G-TAG-CA--TT-TAGT--C
i Cuniculus_paca.CunPac_flattened_line_16637            I 1 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             62240 43 -    236241 C----TG-GCAG-AA-AATT-GTGTT--CC-TCTCGTT-----------------GCT---G-TAG-CA--TT-TGGT--T
i Dasyprocta_punctata.DasPun_flattened_line_634         I 1 C 0
s Dasypus_novemcinctus.JH568778.1                          185900 35 -   6883506 ----CTG-ATGG-GA-TATT-TTGTT--TT-GCTGGTT-----------------GAAGAAG-A-----------------
i Dasypus_novemcinctus.JH568778.1                       C 0 I 8
s Daubentonia_madagascariensis.ctg11                     16849361 44 +  31942871 T---CTG-ATGG-AA-AATT-GTGCT--TC-TTTGGTT-----------------GCA---G-TAG-AG--TC-CAGT--T
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80040880 37 -  96802777 ----ctg-attG-AA-AATT-TTGGT--TC-TCTGCTT-----------------GCA---C-GAA-AT--T---------
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18701446 42 -  18957592 ----ctg-tttg-aa-aatt-ttGGT--TT-TCTGGTT-----------------ACA---A-AA--AG--TT-TAAT--T
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 326480 43 +    993696 ----ata-attg-aa-AACT-TTGGT--TC-CCTGGTT-----------------GCA---G-ACG-AG--Tc-cagt--t
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 I 2
s Diceros_bicornis.DicBicMic_scaffold_9545                   7119 43 +    151128 ----ATA-ATTG-AA-AATT-TTGGT--TC-CCTGGTT-----------------GCA---G-AAG-AG--TC-CAGT--T
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 I 3
s Dinomys_branickii.DinBra_scaffold_1996                   159872 40 +    228994 T----CA-GCAG-AA-AACT-GT-----TC-CCTGGTT-----------------CCT---G-TAG-GG--TT-TAAT--T
i Dinomys_branickii.DinBra_scaffold_1996                C 0 I 4
s Dipodomys_ordii.KN672545.1                              3660591 14 +   4240102 T--CCTC-ATGG-AA-AAT--------------------------------------------------------------
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  2945 14 -     11986 T--CCTC-ATGG-AA-AAT--------------------------------------------------------------
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                40817 43 -     73477 T----TG-GCAG-AA-AATT-GTGTT--CC-CCTGGTT-----------------GCT---G-TAG-GG--TT-TAGT--T
i Dolichotis_patagonum.DolPat_scaffold_14102            I 1 C 0
s Echinops_telfairi.JH980316.1                           23000137 44 -  44670279 ----CCCTTTGA-AA-AACG-TTGGT--TC-CTTGGTT-----------------GCA---C-ACA-CA--TG-TGTT--T
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1496467 43 +   1727528 ----cag-attg-GA-GATT-TTGGT--TC-TCTACTT-----------------GCA---G-GAG-Ag--tt-gttt--c
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7833195 42 +  15467074 ----ca--ttgg-AA-AATT-TTTCT--TC-CTGGTTT-----------------GCA---G-ATG-CA--TC-CAGT--T
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        244060 23 -    369425 ----TTT-ATGG-AA-AACT-GGGTT--GC-ACC-----------------------------------------------
i Ellobius_lutescens.LOEQ01003611.1                     C 0 I 7
s Enhydra_lutris.KZ291749.1                              85877711 43 +  99434291 ----CTG-ATTG-AA-AAAT-TTTGT--TC-CCTGGGG-----------------ACA---G-AAG-AC--Tc-agat--t
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4709201 41 +   6522550 ----CTg-attg-aa-aatt-ttg----tttttt-gtt-----------------aca---a-AAG-Ag--tt-tagt--t
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5856591 23 -   7175178 ----------TG-AA-AATC-TTAATCTTC-CTTTGA--------------------------------------------
i Equus_asinus.JREZ01000062.1                           C 0 I 7
s Equus_caballus.CM000402.2                              13355091 23 +  41866177 ----------TG-AA-AATC-TTAATCTTC-CTTTGA--------------------------------------------
i Equus_caballus.CM000402.2                             C 0 I 7
s Equus_przewalskii.ATBW01073585.1                          16581 23 +     92910 ----------TG-AA-AATC-TTAATCTTC-CTTTGa--------------------------------------------
i Equus_przewalskii.ATBW01073585.1                      C 0 I 7
s Erinaceus_europaeus.JH835290.1                         11541552 35 +  16010500 ----ctT-ATTG-GA-AATT-GCAGC--CC-Cctattt-----------------gca---g-aaa-a-------------
i Erinaceus_europaeus.JH835290.1                        C 0 I 40
s Erythrocebus_patas.Contig8                             48781075 44 -  48907691 T---CTG-ATGG-AA-AATT-ATGTT--TC-TCTTGTT-----------------AGA---A-TAG-AG--CC-CAAT--T
i Erythrocebus_patas.Contig8                            C 0 I 17
s Eschrichtius_robustus.EscRob_flattened_line_685          319104 37 +    330699 ----CTG-ATTG-AA-AATT-TTGGT--TC-TCTGCTT-----------------GCA---C-AAA-AT--T---------
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             65561 37 +     89355 ----CTG-ATTG-AA-AATT-TTGGT--TC-TCTGCTT-----------------GCA---C-AAA-AT--T---------
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              9514 44 +     13586 T---CTG-GTGG-AA-AATT-ATGTT--TC-CTTGGTT-----------------GGA---G-GAG-GG--AC-CAGT--T
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_1015201                              2776 41 -      4292 T---CTG-GTGG-AA-A----ATGTT--TC-CTTGGTT-----------------GCA---G-GAG-GG--AC-CAGT--T
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            15910 44 +     36558 T---CTG-GTGG-AA-AATT-ATGTT--TC-CTTGGCT-----------------GCA---G-GAG-GG--AC-CAGT--T
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            12235 41 +     60246 T---CTG-GTGG-AA-A----ATGTT--TC-CTTGGTT-----------------GCA---G-GAG-GG--AC-CAGT--T
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                15717 44 +    109717 T---CTG-GTGG-AA-AATT-ATGTT--TC-CTTGGTT-----------------GCA---G-GAG-GG--AC-CAGT--T
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 3703 41 -     19505 T---CTG-GTGG-AA-A----ATGTT--TC-CTTGGTT-----------------GCA---G-GAG-GG--AC-CAGT--T
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                20375 44 +     27497 T---CTG-GTGG-AA-AATT-ATGTT--TC-CTTGGTT-----------------GGA---G-GAG-GG--AC-CAGT--T
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           22831 44 +     26808 T---CTG-GTGG-AA-AACT-ATGTT--TC-TTTGGTT-----------------GCA---G-GAG-GG--AC-CAGT--T
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                37566 41 +     46535 T---CTG-GTGG-AA-A----ATGTT--TC-CTTGGTT-----------------GCA---G-GAG-GG--AC-CAGT--T
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              20304 44 -     29447 T---CTG-GTGG-AA-AATT-ATGTT--TC-CTTGGTT-----------------GCA---G-GAG-GG--AC-CAGT--T
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129899178 43 - 159252932 ----CCG-ATTG-AA-AAAT-TTGGT--TC-CTTGGGA-----------------GCA---G-AAG-CA--Tc-tagt--t
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129286153 43 - 158578461 ----CCG-ATTG-AA-AAAT-TTGGT--TC-CTTGGGA-----------------GCA---G-AAG-CA--Tc-tagt--t
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 27252 43 +     52776 ----CCG-ATTG-AA-AAAT-TTGGT--TC-CTTGGGA-----------------GCA---G-AAG-CA--TC-TAGT--T
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13896385 44 -  19261668 C----TG-GCAGGAA-AATG-TTGTT--CC-CCTGGTT-----------------GTT---G-TAG-GC--TG-cagt--t
i Fukomys_damarensis.KN123630.1                         I 1 C 0
s Galago_moholi.ctg555                                     215564 44 -    847004 C---CTG-ATGG-AA-AATT-GTGTT--TC-CTTGGTT-----------------TCA---G-GAG-AG--TC-CACT--T
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           17925 44 -     43889 C---CTG-ATGG-AA-AATT-GTGTT--TC-CTTGGTT-----------------TCA---G-TAG-AG--TC-CACT--T
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          15069 44 +     27357 C---CTG-AGGG-AA-AATT-GTGTT--TC-CTTGGTT-----------------TCA---G-TAG-AG--TC-CGGT--T
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               159818 42 +    324696 T---ATG-ATGG-AA-AATT-GTGTT--TC-CCTGGGT-----------------GCA---G-TAG-AG--TC---AT--T
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    186257 39 -    189561 ----TAG-ATTG-GA-GATT-TTGGT--TC-TCTACTT-----------------GCA---G-GAG-AG--TT-G------
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           16706 45 -     18683 T---CTG-ATGG-AAAAATT-ATGTT--TC-CCTGGTT-----------------GCT---A-TAG-AG--TC-AAGA--T
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               9490 44 -     14630 T---CTG-ATGG-AA-AATT-GTGTT--TC-TCTTGTT-----------------AGA---A-TAG-AG--CC-CAAT--T
i Gorilla_beringei.k141_111300                          C 0 I 21
s Gorilla_gorilla.LT578340.1                            119656590 44 - 195582420 T---CTG-ATGG-AA-AATT-GTGTT--TC-TCTTGTT-----------------AGA---A-TAG-AG--Cc-caat--t
i Gorilla_gorilla.LT578340.1                            C 0 I 21
s Graphiurus_murinus.GraMur_scaffold_4493                   80024 44 +    118900 T---CTG-ATGT-AAAAA-T-ATGTT--TC-CCTGGTT-----------------GCT---A-TGG-AG--TC-CAGA--T
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         6297 44 +     10286 T---CCA-GTGG-AA-AATT-GTGTT--TC-TTTGGTT-----------------GCA---G-AAG-GG--AC-CAGT--T
i Hapalemur_alaotrensis.k141_1280836                    C 0 I 2
s Hapalemur_gilberti.k141_279011                             4775 44 -     11661 T---CCA-GTGG-AA-AATT-ATGTT--TC-TTTGGTT-----------------GCA---G-AAG-GG--AC-CAGT--T
i Hapalemur_gilberti.k141_279011                        C 0 I 2
s Hapalemur_griseus.k141_1387522                            10102 44 +     56096 T---CCA-GTGG-AA-AATT-ATGTT--TC-TTTGGTT-----------------GCA---G-AAG-GG--AC-CAGT--T
i Hapalemur_griseus.k141_1387522                        C 0 I 2
s Hapalemur_meridionalis.k141_186231                        33351 44 -     42470 T---CCA-GTGG-AA-AATT-GTGTT--TC-TTTGGTT-----------------GCA---G-AAG-GG--AC-CAGT--T
i Hapalemur_meridionalis.k141_186231                    C 0 I 2
s Hapalemur_occidentalis.k141_797938                        49974 44 -     54384 T---CCA-GTGG-AA-AATT-ATGTT--TC-TTTGGTT-----------------GCA---G-AAG-GG--AC-CAGT--T
i Hapalemur_occidentalis.k141_797938                    C 0 I 2
s Helogale_parvula.HelPar_flattened_line_22962              22882 43 +     53719 ----CTG-ATTG-AA-AAAT-TTGGT--TC-CCTGGGG-----------------GCA---G-AAG-AG--TC-TAGT--T
i Helogale_parvula.HelPar_flattened_line_22962          C 0 I 4
s Hemitragus_hylocrius.HemHyl_scaffold_16669                33136 43 -     91191 ----CAG-ATTG-GA-GATT-TTGGT--TC-TCTACTT-----------------GCA---G-GAG-AG--TT-GTTT--C
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2560878 43 +  31725842 C----TG-ACAG-AA-AATT-TTATT--CC-CCTGGTT-----------------ACT---A-TAG-GC--TT-CAGT--T
i Heterocephalus_glaber.JH602058.1                      I 1 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               63105 43 +     73687 ----CTT-GTGG-AA-ATTT-TTGGT--CC-CTGTGTT-----------------TCA---T-ACA-CA--TC-TGGG--T
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              150886 43 +    277961 ----CTG-ATTG-AA-AATT-TTGGT--TC-TCTGCTT-----------------GCA---C-AAG-AG--TC-CAGT--G
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 I 2
s Hipposideros_armiger.JXIK01001085.1                      283284 43 -    477199 ----ctg-aatg-aa-aatt-tTGGT--TT-CTTGGTT-----------------GCA---A-AA-GAg--tt-caat--t
i Hipposideros_armiger.JXIK01001085.1                   C 0 I 5
s Hipposideros_galeritus.HipGal_scaffold_52959               1054 43 +     26078 ----CTG-ATTG-AA-AATT-TTGGC--CT-CTTGGTT-----------------GCA---A-AA-GAG--TT-CAAT--T
i Hipposideros_galeritus.HipGal_scaffold_52959          I 52 I 5
s Hoolock_leuconedys.ctg649                                   109148 44 +    115816 T---CTG-ATGG-AA-AATT-GTGTT--TC-TCTTGTT-----------------AGA---A-TAG-AG--CC-CAAT--T
i Hoolock_leuconedys.ctg649                                C 0 I 21
s Hyaena_hyaena.HyaHya_flattened_line_20729                 23354 42 -     67322 ----CTT-ATTG-AA--AAT-TTGGT--TC-CCTGGGG-----------------GTA---G-AGG-AG--TC-TAGT--T
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 I 4
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           21486 43 -    119109 T----TG-GCAG-AA-AATT-GTGTT--CC-CCTGGTT-----------------GCT---G-TAG-GG--TT-TAGT--T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       I 1 C 0
s Hylobates_abbotti.k141_1816750                             1976 44 +      3202 T---CTG-ATGG-AA-AATT-GTGTT--TC-TCTTGTT-----------------AGA---A-TAG-AG--CC-CAAT--T
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1633646                              1946 44 -      2102 T---CTG-ATGG-AA-AATT-GTGTT--TC-TCTTGTT-----------------AGA---A-TAG-AG--CC-CAAT--T
i Hylobates_agilis.k141_1633646                         C 0 C 0
s Hylobates_klossii.k141_468230                              3464 44 +      5464 T---CTG-ATGG-AA-AATT-GTGTT--TC-TCTTGTT-----------------AGA---A-TAG-AG--CC-CAAT--T
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14628811 44 -  25970782 T---CTG-ATGG-AA-AATT-GTGTT--TC-TCTTGTT-----------------AGA---A-TAG-AG--CC-CAAT--T
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            1363 44 +      4161 T---CTG-ATGG-AA-AATT-GTGTT--TC-TCTTGTT-----------------AGA---A-TAG-AG--CC-CAAT--T
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             37673 44 -     60944 T---CTG-ATGG-AA-AATT-GTGTT--TC-TCTTGTT-----------------AGA---A-TAG-AG--CC-CAAT--T
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     9779 45 +     22540 TT--CTG-GCAG-AA-AATT-ATGTT--CC-CCTGATT-----------------GCT---G-TAG-GG--TT-CATT--T
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7130624 25 +  13083262 t---tta-atgg-aa-aa-t-gaaTT--TC-CCTG--------------------G-------------------------
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 I 16
s Indri_indri.k141_2197838                                   1823 44 +      3484 T---CTG-GTGG-AA-AATT-ATGTT--TC-CTTGGTT-----------------GCA---G-TAG-GG--AC-CAGT--T
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              13092 37 +     17520 ----CTG-ATTG-AA-AATT-TTGGT--TC-TCTGCTT-----------------GCA---C-AAA-AT--T---------
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8577673 25 +  11848649 -----------------------------C-CCAGGTT-----------------ACA---A-CAG-AA--TT-CAGT-AT
i Jaculus_jaculus.JH725517.1                            C 0 I 1
s Kogia_breviceps.KogBre_flattened_line_35920               27711 37 +     37189 ----CTG-ATTG-AA-AATT-TTGGT--TC-TCTGCTT-----------------GCA---C-AAA-AT--T---------
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          54259 44 -    147782 T---ATG-ATGG-AC-AACT-GTGTT--TC-CCTTTTT-----------------AAA---A-CAG-AG--CC-CAGT--T
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    5813 30 +     26176 ----CTG-ATAA-AA-AATT-TTG----TC-TTT-GTT-----------------ACA---A-AA----------------
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 I 9
s Lemur_catta.scaffold_1                                258411649 44 - 285822530 T---CCA-GTGG-AA-AATT-ATGTT--TC-CTTGGTT-----------------GCA---G-GAG-AG--AC-CAGT--T
i Lemur_catta.scaffold_1                                C 0 I 2
s Lepilemur_ankaranensis.k141_884009                        28963 41 +     39228 T---C----TGG-AA-AATT-ATGTT--TC-CTTGGTT-----------------GCA---G-TAG-GG--AC-CAGT--T
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            58327 41 +     63517 T---C----CGG-AA-AATT-ATGTT--TC-CTTGGTT-----------------GCA---G-TAG-GG--AC-CAGT--T
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        36707 41 -     38897 T---C----TGG-AA-AATT-ATGTT--TC-CTTGGTT-----------------GCA---G-TAG-GG--AC-CAGT--T
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      2753 41 -     13103 T---C----TGG-AA-AATT-ATGTT--TC-CTTGGTT-----------------GCA---G-TAG-GG--AC-CAGT--T
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3091688 43 -   3498232 ----CTG-ATTG-AA-AAAT-TTGGT--TC-CCTGGGG-----------------GCA---G-AAG-AG--Tc-tagt--t
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    21114 44 +     22452 T---CTG-GTGG-AA-AACT-GTCTT--TC-CAAGTTT-----------------GCT---G-TTG-AG--TC-CAGT--T
i Lepus_americanus.LepAme_scaffold_62849                I 1 I 6
s Lipotes_vexillifer.KE558548.1                            140026 37 +   3060487 ----ctg-attG-AA-AATT-TTGGT--TC-TCTGCTT-----------------GCA---C-AAA-AT--T---------
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19252696 44 +  19376315 T---CTG-ATGG-AA-AATT-ATGTT--TC-TCTTGTT-----------------AGA---A-TAG-AG--CC-CAAT--T
i Lophocebus_aterrimus.ctg55                            C 0 I 17
s Loris_lydekkerianus.k141_550999                           15527 44 +     84689 C---CTA-ATGG-AA-AATT-GTGTT--TC-CTTGGTT-----------------TCA---A-TAG-AG--TC-CAGT--T
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3783266 44 +   6799190 C---CTA-ATGG-AA-AATT-GTGTT--TC-CTTGGTT-----------------TCA---A-TAG-AG--TC-CAGT--T
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20599027 43 -  62548349 ----tct-ttgg-aa-attt-ttggt--tc-cttggtt-----------------tca---G-ATA-CA--TC-CAGG--T
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11095447 43 +  39895028 ----ctg-atta-aa-aaaa-ttggT--TC-CCTGGGG-----------------GCA---G-AAG-AG--TC-tagt--t
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             24447 44 +     74745 T---CTG-ATGG-AA-AATT-ATGTT--TC-TCTTGTT-----------------AGA---A-TAG-AG--CC-CAAT--T
i Macaca_arctoides.k141_2201161                         C 0 I 32
s Macaca_assamensis.Contig65                             12710908 44 +  12821369 T---CTG-ATGG-AA-AATT-ATGTT--TC-TCTTGTT-----------------AGA---A-TAG-AG--CC-CAAT--T
i Macaca_assamensis.Contig65                            C 0 I 32
s Macaca_cyclopis.k119_883699                                3481 44 -     26467 T---CTG-ATGG-AA-AATT-ATGTT--TC-TCTTGTT-----------------AGA---A-TAG-AG--CC-CAAT--T
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           51352 44 +     63263 T---CTG-ATGG-AA-AATT-ATGTT--TC-TCTTGTT-----------------AGA---A-TAG-AG--CC-CAAT--T
i Macaca_fascicularis.k141_155037                       C 0 I 17
s Macaca_fuscata.k119_938422                                 3462 44 -     26361 T---CTG-ATGG-AA-AATT-ATGTT--TC-TCCTGTT-----------------AGA---A-TAG-AG--CC-CAAT--T
i Macaca_fuscata.k119_938422                            C 0 I 17
s Macaca_leonina.k141_467472                                 6652 44 -      7381 T---CTG-ATGG-AA-AATT-ATGTT--TC-TCTTGTT-----------------AGA---A-TAG-AG--CC-CAAT--T
i Macaca_leonina.k141_467472                            C 0 I 32
s Macaca_maura.k141_251854                                  49881 44 -     79256 T---CTG-ATGG-AA-AATT-ATGTT--TC-TCTTGTT-----------------AGA---A-TAG-AG--CC-CAAT--T
i Macaca_maura.k141_251854                              C 0 I 32
s Macaca_mulatta.NC_041755.1                            196039979 44 + 196197964 T---CTG-ATGG-AA-AATT-ATGTT--TC-TCTTGTT-----------------AGA---A-TAG-AG--Cc-caat--t
i Macaca_mulatta.NC_041755.1                            C 0 N 0
s Macaca_nemestrina.KQ004885.1                           11450149 44 +  11645122 t---ctg-ATGG-AA-AATT-ATGTT--TC-TCTTGTT-----------------AGA---A-TAG-AG--Cc-caat--t
i Macaca_nemestrina.KQ004885.1                          C 0 I 17
s Macaca_nigra.k141_282495                                   8835 44 -     46448 T---CTG-ATGG-AA-AATT-ATGTT--TC-TCTTGTT-----------------AGA---A-TAG-AG--CC-CAAT--T
i Macaca_nigra.k141_282495                              C 0 I 32
s Macaca_radiata.k141_3680256                                6498 44 -     13212 T---CTG-ATGG-AA-AATT-ATGTT--TC-TCTTGTT-----------------AGA---A-TAG-AG--CC-CAAT--T
i Macaca_radiata.k141_3680256                           C 0 I 32
s Macaca_siberu.k141_741907                                 20178 44 -     55006 T---CTG-ATGG-AA-AATT-ATGTT--TC-TCTTGTT-----------------AGA---A-TAG-AG--CC-CAAT--T
i Macaca_siberu.k141_741907                             C 0 I 32
s Macaca_silenus.Contig12                                43845293 44 +  43892939 T---CTG-ATGG-AA-AATT-ATGTT--TC-TCTTGTT-----------------AGA---A-TAG-AG--CC-CAAT--T
i Macaca_silenus.Contig12                               C 0 I 17
s Macaca_thibetana.k99_662710                               21462 44 -     24607 T---CTG-ATGG-AA-AATT-ATGTT--TC-TCTTGTT-----------------AGA---A-TAG-AG--CC-CAAT--T
i Macaca_thibetana.k99_662710                           C 0 I 17
s Macaca_tonkeana.k141_2870633                               8832 44 -     27140 T---CTG-ATGG-AA-AATT-ATGTT--TC-TCTTGTT-----------------AGA---A-TAG-AG--CC-CAAT--T
i Macaca_tonkeana.k141_2870633                          C 0 I 17
s Mandrillus_leucophaeus.scaffold125                     43441868 44 -  43563597 T---CTG-ATGG-AA-AATT-ATGTT--TC-TCTTGTT-----------------AGA---A-TAG-AG--CC-CAAT--T
i Mandrillus_leucophaeus.scaffold125                    C 0 I 32
s Mandrillus_sphinx.Contig144                             4454672 44 -   4543643 T---CTG-ATGG-AA-AATT-ATGTT--TC-TCTTGTT-----------------AGA---A-TAG-AG--CC-CAAT--T
i Mandrillus_sphinx.Contig144                           C 0 I 32
s Manis_javanica.JSZB01003966.1                            152408 43 +    252755 ----CTG-ATTG-AA-TATT-TTCCT--TC-CCTGGTT-----------------GCA---G-AAG-Ag--tc-cttt--t
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             39998 43 +     58827 ----CTG-ATTG-AA-TATT-TTCCT--TC-CCTGGTT-----------------GCA---G-AAG-AG--TC-gagt--t
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36878493 25 +  64221397 t---tta-atgg-aa-aa-t-gcaTT--TC-CCTG--------------------G-------------------------
i Marmota_marmota.CZRN01000005.1                        C 0 I 16
s Megaderma_lyra.MegLyr_scaffold_3562                       65841 43 -    234502 ----CTG-ATTG-AA-AATG-TTGGT--TT-TTTGGTC-----------------GCA---A-AG-CAG--TT-CAGT--T
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 I 5
s Mellivora_capensis.MelCap_flattened_line_15433             6603 43 -     87323 ----CTG-ATTG-AA-AAAT-GTTGT--TC-CCTGGGG-----------------ACA---G-AAG-AC--TC-CAAT--T
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 1512 23 +    115071 ----CTC-ACTG-AA-AACT-GAGTT--AT-ACC-----------------------------------------------
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 I 7
s Mesocricetus_auratus.KB708139.1                         1051781 23 -  26018355 ----TCT-ATGG-AA-AACT-GGGTT--TC-ACC-----------------------------------------------
i Mesocricetus_auratus.KB708139.1                       C 0 I 7
s Mesoplodon_bidens.MesBid_scaffold_96348                    2683 16 -     12939 ----CTG-ATTG-AA-AATT-TTG---------------------------------------------------------
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 I 24
s Microcebus_murinus.CM007691.1                          16514681 43 +  47401472 t----tg-gTGG-AA-AATT-ATGTT--TC-CTTGGTT-----------------GCA---G-GAG-GG--AC-Cagt--t
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  41696 44 -     48017 ----CCTTGTGA-AA-AGCA-TTGAT--TC-CCTGGTT-----------------GCA---C-AAG-CA--TC-AGTG--T
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               25194 42 -     32043 ----CTG-GTTG-AA-AATT-TTGGT--TT-TCTGATT-----------------ACA---A-AA--AG--TT-TAAT--T
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22824857 23 -  98408828 ----CTT-ATGG-AA-AACT-GGGTT--GC-ACC-----------------------------------------------
i Microtus_ochrogaster.CM001673.1                       C 0 I 7
s Miniopterus_natalensis.LDJU01000022.1                   8213249 42 +  10048721 ----ctg-actt-aa-aatt-ttt-a--tt-tttggtt-----------------aca---A-AAG-AG--tt-tagt--t
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            37738 42 +     45743 ----CTG-ACTT-AA-AATT-TTT-A--TT-TTTGGTT-----------------ACA---A-AAG-AG--TT-TAGT--T
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         6414 44 +     29742 T---CTG-ATGG-AA-AATT-ATGTT--TC-TCTTGTT-----------------AGA---A-TAG-AG--CC-CAAT--T
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        17184 43 -    104932 ----CTG-ATTG-AA-AAAT-TTGGT--TC-CCTGGGG-----------------GCA---G-AAG-AG--TC-TAGT--T
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     5364 44 -     12809 T---CTG-GTGG-AA-AATT-ATGTT--TC-CTTGGTT-----------------GCA---G-GGG-GG--AC-CAGT--T
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 150473 37 +    154973 ----CTG-ATTG-AA-AATT-TTGGT--TC-TCTGCTT-----------------GCA---C-GAA-AT--T---------
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                163730 42 +    265003 ----CTG-ATCA-AA-AATT-TTGGG--TT-TTTGGTT-----------------ACA---A-AA--AG--TT-TAAT--T
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 I 4
s Moschus_moschiferus.MosMos_scaffold_78805                  6485 43 -     19904 ----CAG-ATTG-GA-GATT-TTGGT--TC-TCTACTT-----------------GCA---G-GAG-AG--CT-GTTT--C
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  150557 43 -    168139 ----CTG-ATTG-AA-AAAT-TTGGT--TC-CCTGGGG-----------------GCA---G-AAG-AG--TC-TAGT--T
i Mungos_mungo.MunMun_flattened_line_8729               C 0 I 4
s Murina_feae.MurFea_scaffold_2254                          24663 31 -    100666 ----CTG-ATTG-AA-AATT-TTG-A--TT-TTT-GTT-----------------ACA---A-AA----------------
i Murina_feae.MurFea_scaffold_2254                      C 0 I 5
s Mus_caroli.LT608236.1                                  70772087 23 +  92629107 ----ATC-ATGA-AA-AACT-GAGTT--AC-TCC-----------------------------------------------
i Mus_caroli.LT608236.1                                 C 0 I 7
s Mus_musculus.chr16                                     75494141 23 +  98207768 ----ATC-ATGA-AA-AACT-GAGTG--AC-TCC-----------------------------------------------
i Mus_musculus.chr16                                    C 0 I 7
s Mus_pahari.LT608305.1                                  67560893 23 +  89017189 ----ATC-ATGA-AA-AACA-GAGTT--AC-TCC-----------------------------------------------
i Mus_pahari.LT608305.1                                 C 0 I 7
s Mus_spretus.CM004110.1                                 74336867 23 +  97876770 ----ATC-ATGA-AA-AACT-GAGTG--AC-TCC-----------------------------------------------
i Mus_spretus.CM004110.1                                C 0 I 7
s Muscardinus_avellanarius.MusAve_scaffold_9643             15111 45 +     98495 T---CTG-ATGG-AAATGTT-ATGTT--TC-CATGGTT-----------------GCT---A-TAG-AG--TC-CAGA--T
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4428920 43 -  28371801 ----CTG-ATTG-AA-AAAT-TTTGT--TC-CCTGGGG-----------------ACA---G-AAG-AC--tc-agct--t
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     94081 43 -    117718 C----TG-GCAG-AA-ACTT-GTGTT--TC-CCTGGTT-----------------GCT---G-TAG-AG--TT-TAGT--T
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 1 C 0
s Myotis_brandtii.KE161952.1                               971536 41 +   8389877 ----CTg-attg-aa-aatt-ttg-t--tt-ttt-gtt-----------------aca---a-AAG-AG--Tt-tagt--t
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5022956 41 +   6462685 ----CTG-ATTG-AA-AATT-TTG-G--TT-TTT-GTT-----------------ACA---A-AAG-Ag--tt-tagt--t
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3469040 41 -   3747815 ----CTG-attg-aa-aatt-ctg-t--tt-ttt-gtt-----------------aCA---A-AAG-Ag--tt-tagt--t
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        14281 41 +     66751 ----CTG-ATTG-AA-AATT-TTG-G--TT-TTT-GTT-----------------ACA---A-AAG-AG--TT-TAGT--T
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             7879 49 -      8794 ----CTG-ATGG-GA-CATT-CTGGT--TC-ACTAGTTGCTGAACCCAGGATTCTTAA---G-A-----------------
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 I 8
s Nannospalax_galili.KL201303.1                            240856 43 -    362372 ----CTG-ATGG-AA-AATT-GTGTT--GT-CCACATT-----------------GCA---A-AAG-AT--CT-CAGT--T
i Nannospalax_galili.KL201303.1                         C 0 I 1
s Nasalis_larvatus.k141_1382660                              4102  8 +      5784 --------------------------------------------------------------------G--CC-CAGT--G
i Nasalis_larvatus.k141_1382660                         n 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4490582 43 -  14209539 ----CTG-ATTG-AA-AAAT-TTGGT--TC-CCTGGGG-----------------GCA---G-AAG-AG--Tc-tagt--t
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3955064 37 -   4490290 ----ctg-attg-AA-AATT-TTGGT--TC-TCTGCTT-----------------GCA---C-AAA-AT--T---------
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  50792 43 +     94413 ----CTG-ATTG-AA-AATT-TGGGGGGAG-GGTGGTT-----------------ACA---A-AA--AA--TT--AAT--T
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_762468                             482 44 -      2755 T---CTG-ATGG-AA-AATT-GTGTT--TC-TCTTGTT-----------------AGA---A-TAG-AG--CC-CAAT--T
i Nomascus_annamensis.k141_762468                       C 0 I 17
s Nomascus_concolor.k141_256540                              7094 44 -      8966 T---CTG-ATGG-AA-AATT-GTGTT--TC-TCTTGTT-----------------AGA---A-TAG-AG--CC-CAAT--T
i Nomascus_concolor.k141_256540                         I 4 I 21
s Nomascus_gabriellae.k141_1400361                           1033 44 -      2203 T---CTG-ATGG-AA-AATT-GTGTT--TC-TCTTGTT-----------------AGA---A-TAG-AG--CC-CAAT--T
i Nomascus_gabriellae.k141_1400361                      C 0 I 17
s Nomascus_siki_b.tarseq_453                             6345 44 +     12787 T---CTG-ATGG-AA-AATT-GTGTT--TC-TCTTGTT-----------------AGA---A-TAG-AG--CC-CAAT--T
i Nomascus_siki_b.tarseq_453                        C 0 I 21
s Nomascus_siki_a.k141_421408                                   947 30 +     16235 T---CTG-ATGG-AA-AATT-GTGTT--TC-TCTTGTT-----------------AG------------------------
i Nomascus_siki_a.k141_421408                             C 0 I 31
s Nyctereutes_procyonoides.CAJHUB010000786.1                38312 43 +   3668941 ----CTG-ATTA-AA-AAAT-TCGGT--TC-CCTGGGG-----------------GCA---G-AAG-AG--Tc-cagt--t
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65572190 44 -  95554990 C---CTG-ATGG-AA-AATT-GTGTT--TC-CTTGGTT-----------------TCA---G-TAG-AG--TC-CAGT--T
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_771591                            15600 44 +     16181 C---CTG-ATGG-AA-AATT-GTGTT--TC-CTTGGTT-----------------TCA---G-TAG-AG--TC-CAGT--T
i Nycticebus_coucang.k141_771591                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65680378 44 +  89412551 C---CTG-ATGG-AA-AATT-GTGTT--TC-CTTGGTT-----------------TCA---G-TAG-AG--TC-CAGT--T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            5000166 30 -  23139505 ---------------------ttctt--tc-ttagTTT-----------------GAT---C-AGG-AG--TC-CAGT--T
i Ochotona_princeps.JH802095.1                          I 7 I 2
s Octodon_degus.JH651621.1                                3689570 43 +  10294119 c----tg-gcaA-AA-ATTC-ATGTT--CC-TCTGGTT-----------------GCT---G-TAG-GG--tt-tagt--t
i Octodon_degus.JH651621.1                              I 1 C 0
s Odobenus_rosmarus.KB229369.1                             685285 43 -   3126709 ----CTG-ATTG-AA-AAAT-TTGGT--TC-CCTGGGG-----------------GCA---G-AAG-AG--TC-TAGT--T
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1083915 43 +   1425656 ----cag-attg-GA-GGTT-TTGGT--TC-TCTACTT-----------------GCA---G-GAG-Ag--tt-gttt--c
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         41991 43 +     78940 ----cag-attg-GA-GATT-TTGGT--TC-TCTACTT-----------------GCA---G-GAG-Ag--tt-gttt--c
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  130653 23 +    145789 ----TTT-ATGG-AA-AACT-GGGTT--GC-ACC-----------------------------------------------
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 I 7
s Onychomys_torridus.OnyTor_scaffold_12578                  43349 23 +     62360 ----CTT-ATGG-AA-AACT-GGGTT--GT-GCC-----------------------------------------------
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 I 7
s Orcinus_orca.KB316965.1                                 7228738 37 -   7562323 ----ctg-attG-AA-AATT-TTGGT--TC-TCTGCTT-----------------GCA---C-AAA-AT--T---------
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              64448 29 -     66828 ----------------------TAGT--TC-CTGGGTT-----------------GCA---G-ATG-CA--TC-CAGT--T
i Orycteropus_afer.OryAfe_flattened_line_13509          I 4 C 0
s Oryctolagus_cuniculus.CM000803.1                      141884131 44 + 163896628 T---CTG-GTGG-AA-AACT-ATCTT--TC-CCTGTTT-----------------GCT---G-TTG-AG--TC-CAGC--T
i Oryctolagus_cuniculus.CM000803.1                      I 1 I 6
s Otocyon_megalotis.JAEUCK010005121.1                      315450 43 -    505867 ----CTG-ATTA-AA-AAAT-TTGGT--TC-CCTGGGG-----------------GCA---G-AAG-AG--TC-tagt--t
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        5426 44 -     53940 C---CTG-ATGG-AA-AATT-GTGTT--TC-CTTGGTT-----------------TCA---A-TAG-AG--TC-CAGT--T
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18013395 44 -  38779656 c---ctG-ATGG-AA-AATT-GTGTT--TC-CTTGGTT-----------------TCA---A-TAG-AG--TC-CAGT--T
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134082922 43 - 275406953 ----cag-attG-GA-GATT-TTGGT--TC-TCTACTT-----------------GCA---G-GAG-AG--TT-GTTT--C
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      84156 43 +    140051 ----CAG-ATTG-GA-GATT-TTGGT--TC-TCTACTT-----------------GCA---G-GAG-AG--TT-GTTT--C
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127578769 44 - 205426864 T---CTG-ATGG-AA-AATT-GTGTT--TC-TCTTGGT-----------------AGA---A-CAG-AG--Cc-caat--t
i Pan_paniscus.CM003386.1                               C 0 I 21
s Pan_troglodytes.CM009241.2                            120155929 44 - 196562556 T---CTG-ATGG-AA-AATT-GTGTT--TC-TCTTGGT-----------------AGA---A-TAG-AG--Cc-caat--t
i Pan_troglodytes.CM009241.2                            C 0 I 21
s Panthera_onca.PanOnc_flattened_line_1615                  40172 43 +    295523 ----CCG-ATTG-AA-AAAT-TTGGT--TC-CTTGGGA-----------------GCA---G-AAG-CG--TC-TAGT--T
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3643987 43 +  18214204 ----CCG-ATTG-AA-AAAT-TTGGT--TC-CTTGGGA-----------------GCA---G-AAG-CG--tc-taat--t
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5033635 43 -   6340057 ----CCG-ATTG-AA-AAAT-TTGGT--TC-CTTGAGA-----------------GCA---G-AAG-CG--tc-taat--t
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1071793 43 -   1292953 ----cag-attg-GA-GATT-TCGGT--TC-TCTACTT-----------------GCA---G-GAG-AG--TT-GTTT--C
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188160657 44 - 188283584 T---CTG-ATGG-AA-AATT-ATGTT--TC-TCTTGTT-----------------AGA---A-TAG-AG--Cc-caat--t
i Papio_anubis.CM001492.2                               C 0 N 0
s Papio_cynocephalus.k141_45376                              3747 44 +     25005 T---CTG-ATGG-AA-AATT-ATGTT--TC-TCTTGTT-----------------AGA---A-TAG-AG--CC-CAAT--T
i Papio_cynocephalus.k141_45376                         C 0 I 32
s Papio_hamadryas.Contig15                               47518029 44 +  47705337 T---CTG-ATGG-AA-AATT-ATGTT--TC-TCTTGTT-----------------AGA---A-TAG-AG--CC-CAAT--T
i Papio_hamadryas.Contig15                              C 0 I 32
s Papio_kindae.k141_5458022                                 72020 44 -    104429 T---CTG-ATGG-AA-AATT-ATGTT--TC-TCTTGTT-----------------AGA---A-TAG-AG--CC-CAAT--T
i Papio_kindae.k141_5458022                             C 0 I 32
s Papio_papio.k141_979496                                   10552 44 +     14967 T---CTG-ATGG-AA-AATT-ATGTT--TC-TCTTGTT-----------------AGA---A-TAG-AG--CC-CAAT--T
i Papio_papio.k141_979496                               C 0 I 17
s Papio_ursinus.k141_1345919                                 6417 44 -      7628 T---CTG-ATGG-AA-AATT-ATGTT--TC-TCTTGTT-----------------AGA---A-TAG-AG--CC-CAAT--T
i Papio_ursinus.k141_1345919                            C 0 I 17
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    121659 43 -    135482 ----CTG-ACTG-AA-AATT-CTGGT--TC-TTTGGGG-----------------ACA---G-AAG-AG--TC-TAGT--T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 I 4
s Perodicticus_ibeanus.k141_117958                          11090 44 -     23713 C---CTG-ATGG-AA-AATT-GTGTT--TC-CTTGGTT-----------------TCA---A-TGG-AG--TC-TAGT--T
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           12241 44 +     61070 C---CTG-ATGG-AA-AATT-GTGTT--TC-CTTGGTT-----------------TCA---A-TGG-AG--TC-TAGT--T
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       2511 47 +     49596 TTTTCTG-ATGG-AA-AATT-GTGTT--TT-CTTCATT-----------------GAA---G-AAA-TG--CC-CAGT--T
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4955715 22 -   8017169 ----TTT-ATGG-AA-AACT-GGGTT--GC-AC------------------------------------------------
i Peromyscus_maniculatus.KI615518.1                     C 0 I 7
s Phocoena_phocoena.PhoPho_flattened_line_53071              3205 37 +      8220 ----CTG-ATTG-AA-AATT-TTGGT--TC-TCTGCTT-----------------GCA---C-AAA-AT--T---------
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Piliocolobus_badius.k141_512007                           29626  8 +     37672 --------------------------------------------------------------------G--CC-CAGT--G
i Piliocolobus_badius.k141_512007                       n 0 C 0
s Piliocolobus_gordonorum.k141_736355                       29543  8 +     67079 --------------------------------------------------------------------G--CC-CAGT--G
i Piliocolobus_gordonorum.k141_736355                   n 0 C 0
s Piliocolobus_kirkii.k141_451083                            4707  8 -     13367 --------------------------------------------------------------------G--CC-CAGT--G
i Piliocolobus_kirkii.k141_451083                       n 0 C 0
s Piliocolobus_tephrosceles.PDMG02000342.1                3428308  8 -   4356645 --------------------------------------------------------------------G--CC-CAGT--G
i Piliocolobus_tephrosceles.PDMG02000342.1              n 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            99819 40 +    112873 ----CTG-ATTG-AA-AATT-TTG----TT-TTT-GTT-----------------ACA---A-AAG-AG--TT-TAGT--T
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           9676 16 +     21690 ----CTG-ATTG-AA-AATT-TTG---------------------------------------------------------
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       26352 44 +     44506 T---CTG-ATGG-AA-AACT-GTGTT--TC-CCTTTTT-----------------AAA---A-TAG-AG--CC-CAGT--T
i Plecturocebus_bernhardi.k141_959214                   C 0 I 4
s Plecturocebus_brunneus.k141_498086                        26565 44 +     67491 T---CTG-ATGG-AA-AATT-GTGTT--TC-CCTTTTT-----------------AAA---A-TAG-AG--CC-CAGT--T
i Plecturocebus_brunneus.k141_498086                    C 0 I 4
s Plecturocebus_caligatus.k141_2539816                      16804 44 -     98129 T---CTG-ATGG-AA-AATT-GTGTT--TC-CCTTTTT-----------------AAA---A-TAG-AG--CC-CAGT--T
i Plecturocebus_caligatus.k141_2539816                  C 0 I 4
s Plecturocebus_cinerascens.k141_744510                     26405 44 +    147771 T---CTG-ATGG-AA-AACT-GTGTT--TC-CCTTTTT-----------------AAA---A-TAG-AG--CC-CAGT--T
i Plecturocebus_cinerascens.k141_744510                 C 0 I 4
s Plecturocebus_cupreus.k141_1145860                         3040 44 -     43940 T---CTG-ATGG-AA-AACT-GTGTT--TC-CCTTTTT-----------------AAA---A-TAG-AG--CC-CAGT--T
i Plecturocebus_cupreus.k141_1145860                    C 0 I 4
s Plecturocebus_dubius.k141_3565563                          7123 44 -     55515 T---CTG-ATGG-AA-AATT-GTGTT--TC-CCTTTTT-----------------AAA---A-TAG-AG--CC-CAGT--T
i Plecturocebus_dubius.k141_3565563                     C 0 I 4
s Plecturocebus_grovesi.k141_242819                         26477 44 +    152463 T---CTG-ATGG-AA-AACT-GTGTT--TC-CCTTTTT-----------------AAA---A-TAG-AG--CC-CAGT--T
i Plecturocebus_grovesi.k141_242819                     C 0 I 4
s Plecturocebus_hoffmannsi.k141_985533                       4285 44 -    119457 T---CTG-ATGG-AA-AACT-GTGTT--TC-CCTTTTT-----------------AAA---A-TAG-AG--CC-CAGT--T
i Plecturocebus_hoffmannsi.k141_985533                  C 0 I 4
s Plecturocebus_miltoni.k141_841561                         16200 43 +    134592 T---CTG-ATGG-AA-AACT-GTG-T--TC-CCTTTTT-----------------AAA---A-TAG-AG--CC-CAGT--T
i Plecturocebus_miltoni.k141_841561                     C 0 I 4
s Plecturocebus_moloch.k141_890597                          26787 44 -     75465 T---CTG-ATGG-AA-AACT-GTGTT--TC-CCTTTTT-----------------AAA---A-TAG-AG--CC-CAGT--T
i Plecturocebus_moloch.k141_890597                      C 0 I 4
s Pongo_abelii.NDHI03003816.1                              191400 44 -    373494 T---CTG-ATGG-AA-AATT-GTGTT--TC-TCTTGTT-----------------AGA---A-TAG-AG--Cc-caat--t
i Pongo_abelii.NDHI03003816.1                           C 0 I 21
s Pongo_pygmaeus.ctg62                                   19812047 44 +  19899266 T---CTG-ATGG-AA-AATT-GTGTT--TC-TCTTGTT-----------------AGA---A-TAG-AG--CC-CAAT--T
i Pongo_pygmaeus.ctg62                                  C 0 I 21
s Presbytis_comata.k141_678168                              10833  8 +     11126 --------------------------------------------------------------------G--CC-CAGT--G
i Presbytis_comata.k141_678168                          n 0 C 0
s Presbytis_mitrata.k141_1767317                            10822  8 +     15869 --------------------------------------------------------------------G--CC-CAGT--G
i Presbytis_mitrata.k141_1767317                        n 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                4210 44 -      9567 ----CTT-GTGG-AA-ATTT-TCGGT--CC-CTGTGTT-----------------TCA---TTATA-CA--TC-TGGG--T
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6853023 44 +  12164890 T---CCA-GTGG-AA-AATT-ATGTT--TC-TTTGGTT-----------------GCA---G-GAG-GG--AC-cagt--t
i Prolemur_simus.MPIZ01000048.1                         C 0 I 2
s Propithecus_coquerelli.NW_012147863.1                     21832 44 -     30946 N---NNN-NNNN-NN-NNNN-NNNNN--NN-NNNNNNN-----------------NNN---N-NNN-NN--NN-NNNN--N
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         8109 44 +     11805 T---CTG-GTGG-AA-AATT-ATGTT--TC-CTTGGTT-----------------GCA---A-TAG-GG--AC-CAGT--T
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           47443 44 +     52369 T---CTG-GTGG-AA-AATT-ATGTT--TC-CTTGGTT-----------------GCA---A-TAG-GG--AC-CAGT--T
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         39830 44 -     44753 T---CTG-GTGG-AA-AATT-ATGTT--TC-CTTGGTT-----------------GCA---G-TAG-GG--AC-AAGT--T
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            21753 44 +     27322 T---CTG-GTGG-AA-AATT-ATGTT--TC-CTTGGTT-----------------GCA---G-TAG-GG--AC-CAGT--T
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       21402 44 -     53241 T---CTG-GTGG-AA-AATT-ATGTT--TC-CTTGGTT-----------------GCA---G-TAG-GG--AC-CAGT--T
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         43665 44 -     48185 T---CTG-GTGG-AA-AATT-ATGTT--TC-CTTGGTT-----------------GCA---G-TAG-GG--AC-CAGT--T
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           38507 23 +     77221 ----CTC-ACTG-AA-AACT-GAGTT--AT-ACC-----------------------------------------------
i Psammomys_obesus.NESX01026517.1                       C 0 I 7
s Pteronotus_parnellii.KE867983.1                            6373 42 -     27784 ----ctg-attg-aa-aatt-ttggt--tt-tatggtt-----------------aca---a-aa--at--tt-taat--t
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        250571 39 -    344369 ----CT-----G-AA-AAAT-TTTGC--TC-CCTGGGA-----------------ACA---G-AAG-AC--TC-AGAT--T
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Puma_concolor.QAVW01000427.1                          131540284 43 - 161321710 ----CCG-ATTG-AA-AAAT-TTGGT--TC-CTTGGGA-----------------GCA---G-AAG-CA--Tc-tagt--t
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_951151                              2859  8 -      8225 --------------------------------------------------------------------G--CC-CAGT--G
i Pygathrix_cinerea.k141_951151                         n 0 C 0
s Pygathrix_nigripes_b.ctg25                                14340695  8 -  15297009 --------------------------------------------------------------------G--CC-CAGT--G
i Pygathrix_nigripes_b.ctg25                               n 0 C 0
s Pygathrix_nigripes_a.k141_758202                             2876  8 -      8240 --------------------------------------------------------------------G--CC-CAGT--G
i Pygathrix_nigripes_a.k141_758202                        n 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                20780 43 +     68503 ----CAG-ATTG-GA-GGTT-TTGGT--TC-TCTACTT-----------------GCA---G-GAG-AG--TT-GTTT--C
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13917926 23 +  90463843 ----TTC-ATGA-AA-AACT-GAGTT--AT-TCC-----------------------------------------------
i Rattus_norvegicus.chr11                               C 0 I 7
s Rhinolophus_sinicus.LVEH01000179.1                      1792884 42 +   2252614 ----ctg-acaG-AA-AATT-TTGGT--TT-CTTGGTT------------------CA---A-AA-GAA--TT-CAAT--T
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 I 5
s Rhinopithecus_roxellana.NC_044549.1                   152255158  8 - 206558726 --------------------------------------------------------------------G--CC-CAGT--G
i Rhinopithecus_roxellana.NC_044549.1                   N 0 C 0
s Rhinopithecus_strykeri.ctg241                            461966  8 +   1472273 --------------------------------------------------------------------G--CC-CAGT--G
i Rhinopithecus_strykeri.ctg241                         n 0 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                      1191 43 -      4338 ----CAG-ATTG-GA-GATT-TTGCT--TC-TCTACTT-----------------GCA---G-GAG-AG--TT-GATT--C
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15676808 44 -  43202129 T---CTG-ATGG-AA-AATT-GTGtc--tc-ccttttt-----------------aaa---a-tag-ag--cc-cagt--t
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        8721 44 +     34089 T---CTG-ATGG-AA-AATT-GTGTC--TC-CCTTTTT-----------------AAA---A-TAG-AG--CC-CAGT--T
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              8661 44 -     60842 T---CTG-ATGG-AA-AATT-GTGTC--TC-CCTTTTT-----------------AAA---A-TAG-AG--CC-CAGT--T
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              8755 44 +     67014 T---CTG-ATGG-AA-AATT-GTGTC--TC-CCTTTTT-----------------AAA---A-TAG-AG--CC-CAGT--T
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              8732 44 +     60816 T---CTG-ATGG-AA-AATT-GTGTC--TC-CCTTTTT-----------------AAA---A-TAG-AG--CC-CAGT--T
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 8669 44 -     76454 T---CTG-ATGG-AA-AATT-GTGTC--TC-CCTTTTT-----------------AAA---A-TAG-AG--CC-CAGT--T
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17345454 44 -  30362882 T---CTG-ACGG-AA-AATT-GTGTT--TC-CCTTTTT-----------------AAA---A-TAA-AG--CC-CAGT--T
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         24775 44 -     62485 T---CTG-ACGG-AA-AATT-GTGTT--TC-CCTTTTT-----------------AAA---A-TAA-AG--CC-CAGT--T
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   39882 28 -    114521 -----------------------GTT--TC-CCTGGTT-----------------GCA---A-AGG-GG--CA-TATT--T
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1743075                       45404  8 +     45790 --------------------------------------------------------------------G--CC-CAGT--G
i Semnopithecus_entellus.k141_1743075                   n 0 C 0
s Semnopithecus_hypoleucos.k141_2141024                      1177  8 -      8815 --------------------------------------------------------------------G--CC-CAGT--G
i Semnopithecus_hypoleucos.k141_2141024                 n 0 C 0
s Semnopithecus_johnii.k141_1300894                          1194  8 +     13764 --------------------------------------------------------------------G--CC-CAGT--G
i Semnopithecus_johnii.k141_1300894                     n 0 C 0
s Semnopithecus_priam.k141_368201                            9933  8 -     20692 --------------------------------------------------------------------G--CC-CAGT--G
i Semnopithecus_priam.k141_368201                       n 0 C 0
s Semnopithecus_schistaceus.k141_628310                     45478  8 -     53123 --------------------------------------------------------------------G--CC-CAGT--G
i Semnopithecus_schistaceus.k141_628310                 n 0 C 0
s Semnopithecus_vetulus.k141_748269                          4532  8 +     17284 --------------------------------------------------------------------G--CC-CAGT--G
i Semnopithecus_vetulus.k141_748269                     n 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  105716 23 -    120886 ----CTT-ATTG-AA-AACT-GGGTT--AC-ATC-----------------------------------------------
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 I 7
s Solenodon_paradoxus.SolPar_flattened_line_1012            23821 43 +    739146 ----CCA-ATGG-AA-AATT-TTGGT--GA-CCAGGTT-----------------GTA---G-AAT-AG--TT-CAGT--T
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 I 4
s Sorex_araneus.JH798170.1                               17774056 39 -  27805282 ----taa-aaat-ag-tttg-ct------c-TCTGGTT-----------------GCA---A-AGG-AG--TC-tggt--c
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2244326 25 +   2842873 t---tta-atgg-aa-aa-t-gaaTT--TC-CCTG--------------------G-------------------------
i Spermophilus_dauricus.KZ294190.1                      C 0 I 16
s Spilogale_gracilis.SpiGra_flattened_line_905             239354 43 -    276980 ----CTG-ATTA-AG-AAAT-GTGGT--TC-CCTGGGG-----------------GCA---G-AAG-AC--TC-GAAT--T
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            33474 43 +     62062 ----CTG-ATTG-AA-AAGT-TTGGT--TC-CTTGGGG-----------------GCA---G-AAG-AG--TC-TAGT--T
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 I 4
s Sus_scrofa.CM000824.4                                 189275260 44 + 218635234 ----CTG-ACTG-AA-AACTTTTGGT--TC-TCTGCTT-----------------GCA---G-AAG-AG--Tc-cagt--t
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        19070 44 -  13920577 T---CTG-ATGG-AA-AATT-GTGTT--TC-TCTTGTT-----------------AGA---A-TAG-AG--CC-CAAT--T
i Symphalangus_syndactylus.tarseq_24                    C 0 I 21
s Tadarida_brasiliensis.TadBra_scaffold_61492                2603 42 +     20549 ----CTG-ATTG-AA-AATT-TTG-G--TT-TTTGGTT-----------------ACA---A-AAG-AA--TT-TAAT--T
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               17552 49 +     45698 ----CTG-ATGG-GA-CATT-CTGGT--TC-ACTAGTTGCTGAACCCAGGATTCTGAA---G-A-----------------
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 I 8
s Tapirus_indicus.TapInd_scaffold_176                      811064 43 +   1148477 ----CTT-ATTG-AA-AATT-TTGGT--TC-CCTGGTT-----------------ACA---G-AAG-AT--TC-TAGT--T
i Tapirus_indicus.TapInd_scaffold_176                   C 0 I 2
s Tapirus_terrestris.TapTer_scaffold_14939                  61706 43 +     99546 ----CTT-ATTG-AA-AATT-TTGGT--TC-CCTGGTT-----------------ACA---G-AAG-AT--TC-TAGT--T
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 I 2
s Theropithecus_gelada.CM009951.1                       194012190 44 - 194193292 T---CTG-ATGG-AA-AATT-ATGTT--TC-TCTTGTT-----------------AGA---A-TAG-AG--Cc-caat--t
i Theropithecus_gelada.CM009951.1                       C 0 N 0
s Tolypeutes_matacus.TolMat_scaffold_475685                   660 32 -      3104 ----CTG-ATGG-GA-TATT-TTGTT--TC-CCTGGTT-----------------GAA---G-A-----------------
i Tolypeutes_matacus.TolMat_scaffold_475685             C 0 I 8
s Tonatia_saurophila.TonSau_scaffold_3334                  138369 41 -    259118 ----CTG-ATTG-AA-AATT-TGGGT--TT-TTTGGTT-----------------ACA---A-AG--AG--TT-TA-T--T
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 I 5
s Trachypithecus_auratus.k141_672638                         4777  8 +     38635 --------------------------------------------------------------------G--CC-CAGT--G
i Trachypithecus_auratus.k141_672638                    n 0 C 0
s Trachypithecus_crepusculus.k141_863597                     4770  8 -     23436 --------------------------------------------------------------------G--CC-CAGT--G
i Trachypithecus_crepusculus.k141_863597                n 0 C 0
s Trachypithecus_cristatus.k141_968903                      32419  8 +     43409 --------------------------------------------------------------------G--CC-CAGT--G
i Trachypithecus_cristatus.k141_968903                  n 0 C 0
s Trachypithecus_francoisi.k141_1012484                       703  8 +      8809 --------------------------------------------------------------------G--CC-CAGT--G
i Trachypithecus_francoisi.k141_1012484                 n 0 C 0
s Trachypithecus_geei.k141_137495                           29932  8 -     42322 --------------------------------------------------------------------G--CC-CAGT--G
i Trachypithecus_geei.k141_137495                       n 0 C 0
s Trachypithecus_germaini.k141_240878                        4897  8 -     24955 --------------------------------------------------------------------G--CC-CAGT--G
i Trachypithecus_germaini.k141_240878                   n 0 C 0
s Trachypithecus_hatinhensis.k141_641377                     1068  8 +      1365 --------------------------------------------------------------------G--CC-CAGT--G
i Trachypithecus_hatinhensis.k141_641377                n 0 C 0
s Trachypithecus_laotum.k141_897381                         45472  8 -     53586 --------------------------------------------------------------------G--CC-CAGT--G
i Trachypithecus_laotum.k141_897381                     n 0 C 0
s Trachypithecus_leucocephalus.k141_352489                   1043  8 +      9423 --------------------------------------------------------------------G--CC-CAGT--G
i Trachypithecus_leucocephalus.k141_352489              n 0 C 0
s Trachypithecus_melamera.k141_950981                        2058  8 -      3512 --------------------------------------------------------------------G--CC-CAGT--G
i Trachypithecus_melamera.k141_950981                   n 0 C 0
s Trachypithecus_obscurus.k141_588024                        4782  8 +      4963 --------------------------------------------------------------------G--CC-CAGT--G
i Trachypithecus_obscurus.k141_588024                   n 0 C 0
s Trachypithecus_phayrei.ctg364                            232281  8 -   1198723 --------------------------------------------------------------------G--CC-CAGT--G
i Trachypithecus_phayrei.ctg364                         n 0 C 0
s Trachypithecus_pileatus.k141_532233                       29952  8 -     40754 --------------------------------------------------------------------G--CC-CAGT--G
i Trachypithecus_pileatus.k141_532233                   n 0 C 0
s Trichechus_manatus.JH594618.1                          16090099 43 +  31416278 ----CCT-TTGC-AA-ATTT-TTGGT--TC-CTGGGTT-----------------TCA---G-ATG-CA--TC-CAGG--T
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2798031 44 -   3938065 t---cta-atag-aa-aatG-GTGTT--CC-CATGAGT-----------------GCA---G-TAG-GG--TC-Tagg--t
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                    9963 44 +     13056 T---CTA-TTGG-AA-AATG-GTGTT--CC-CATGGGT-----------------GCA---G-TAG-GG--TC-CAGG--T
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69317467 37 -  96451834 ----ctg-attg-AA-AATT-TTGGT--TC-TCTGCTT-----------------GCA---C-AAA-AT--T---------
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                     340 13 +    136657 -----------------------TGT--TC-CCTGGGT-----------------G-------------------------
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 I 13
s Ursus_maritimus.KK498671.1                              6520987 43 +  28682327 ----CTG-ATTG-AA-AAAT-TTGGT--TC-CCTGGGG-----------------GCA---G-AAG-AG--Tc-tagt--t
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  9666 44 -     20643 T---CCG-GTGG-AA-AATT-ATGTT--TT-CTTGGTT-----------------GCA---G-GAG-GG--AC-CAGT--T
i Varecia_rubra.k141_432109                             C 0 I 2
s Varecia_variegata.k141_775891                             29201 44 -     33872 T---CCG-GTGG-AA-AATT-ATGTT--TT-CTTGGTT-----------------GCA---G-GAG-GG--AC-CAGT--T
i Varecia_variegata.k141_775891                         C 0 I 2
s Vicugna_pacos.KN269600.1                                1528487 45 -   2331223 ----ctg-attt-aa-aaac-ttGGT--TC-TCTGCTT-----------------GCA---G-AAG-AG--TC-tagtctt
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                144677 43 -    281493 ----CTG-ATTA-AA-AAAT-TTGGT--TC-CCTGGGG-----------------GCA---G-AAG-AG--TC-TAGT--T
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       131814 38 -    134049 T----TG-ATGG-AA-AA-T-GTGTT--TC-CCTG---------------------TG---G-TAG-AG--TC-CATT--T
i Xerus_inauris.XerIna_scaffold_7898                    C 0 I 4
s Zalophus_californianus.ZalCal_flattened_line_4097        220143 43 -    227762 ----CTG-AGTG-AA-AAAT-TTGGT--TC-CCTGGGG-----------------GCA---G-AAG-AG--TC-TAGT--T
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_256618                      408 25 -      2259 -----------------------------C-CCTGGTT-----------------GCA---A-TAG-AA--CT-CAGC-TT
i Zapus_hudsonius.ZapHud_scaffold_256618                C 0 I 1
s Ziphius_cavirostris.ZipCav_flattened_line_60625            2215 16 -     13665 ----CTG-ATTG-AA-AATT-TTG---------------------------------------------------------
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Petromus_typicus.PetTyp_scaffold_33007                    17492  0 -     36578 C
e Tragulus_javanicus.TraJav_scaffold_14717                   9488 743 +     90398 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Tarsius_wallacei.k141_48636                               64696  0 +     65473 C
e Tarsius_lariang.k141_609102                               31387  0 +     42269 C
e Rhinopithecus_bieti.k119_554384                            2917  0 -     17045 C
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Cephalopachus_bancanus.k141_702587                        12545  0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530  0 +    345090 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               17835 17 +    209709 T------------ATC--C----TT-T--------C---------TATTTTTC
s Acinonyx_jubatus.LLWD01000356.1                         2039801 19 +   3721120 t--------ctct--c--t----tc-t--------c---------tgttcagt
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    118143 13 -    189883 ------------------c----tt-t--------t---------tattgaac
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 110 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10663762 19 +  23371972 TCAC-----T-----C--T----TC-T--------C---------TGTTCAGt
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7100291 19 -  16596857 t--------ctct--c--t----cc-t--------c---------tgttcagT
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_141108                    692 17 -      7259 TC-------T-----T--T----AT-T--------C---------TATttagc
i Allactaga_bullata.AllBul_scaffold_141108              I 1 C 0
s Allenopithecus_nigroviridis.k141_2285818                  36720 17 -     52229 T------------CTC--T----TT-T--------C---------TGTTTATC
i Allenopithecus_nigroviridis.k141_2285818              n 17 I 5
s Allochrocebus_lhoesti.k141_2676980                        46409 17 +     59001 T------------CTC--T----TT-T--------C---------TGTTTATC
i Allochrocebus_lhoesti.k141_2676980                    n 32 C 0
s Allochrocebus_preussi.k141_1848067                         5663 17 +      6015 T------------CTC--T----TT-T--------C---------TGTTTATC
i Allochrocebus_preussi.k141_1848067                    n 17 I 5
s Allochrocebus_solatus.k141_3029467                         1041 17 +      1260 T------------CTC--T----TT-T--------C---------TGTTTATC
i Allochrocebus_solatus.k141_3029467                    n 32 C 0
s Alouatta_belzebul.k141_276091                              1304 17 +     19852 T------------ATC--T----TT-T--------T---------TAGTTTTC
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                3548 17 -     12443 T------------ATC--T----TT-T--------T---------TAGTTTTC
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                              847 17 +      5070 T------------ATC--T----TT-T--------T---------TAGTTTTC
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                  592 17 -      1641 T------------ATC--T----TT-T--------T---------TAGTTTTC
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          3331 17 -     24210 T------------ATC--T----TT-T--------T---------TAGTTTTC
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           29913 17 -     30219 T------------ATC--T----TT-T--------T---------TAGTTTTC
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_405616                              5749 17 +     16794 T------------ATC--T----TT-T--------T---------TAGTTTTC
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                             881 17 -      1470 T------------ATC--T----TT-T--------T---------TAGTTTTC
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             5026 17 -      9835 T------------ATC--T----TT-T--------T---------TAGTTTTC
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3525830 17 +   4113121 TC-------T-----C--T----TC-T--------G---------TGATCAGT
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      392855 19 -    631301 TC-------TC-T--C--T----TT-T--------C---------TGTTCAGC
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             3263 17 +     55446 TC-------T-----C--T----CC-T--------C---------TGATCAGT
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 66635 17 +     78111 T------------ATC--T----TT-T--------T---------TACTTTTC
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            9583 17 +     22701 T------------ATC--T----TT-T--------T---------TACTTTTC
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5753540 17 +   9889416 t------------atc--t----tt-t--------t---------tacttttc
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                            10139 17 -    104377 T------------ATC--T----TT-T--------T---------TACTTTTC
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                              10146 17 +     23246 T------------ATC--T----TT-T--------T---------TACTTTTC
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     2675 17 +     11424 T--------T--T--C--T----TT-T--------C---------AATTCAGC
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        6761 19 +      9265 GC-------T---GTT--A----TT-T--------C---------TATTCAGC
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                11260 19 -     29036 TC-------TC-T--C--T----TC-T--------C---------TGTTTAGT
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9543434 17 +  39197703 T------------ACC--T----TT-T--------T---------TACTTTTC
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             64708 17 +     85812 T------------ACC--T----TT-T--------T---------TACTTTTC
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                15721 17 +     89302 T------------ACC--T----TT-T--------T---------TACTTTTC
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             20222 17 -     58268 T------------ACC--T----TT-T--------T---------TACTTTTC
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             68216 17 +    119057 T------------ACC--T----TT-T--------T---------TACTTTTC
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              10185 17 -     25888 T------------ACC--T----TT-T--------T---------TACTTTTC
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                11245 19 -     16375 TC-------T---GTC--T----TT-T--------C---------TATGTAGC
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               4861 19 +      6337 TC-------T---GTC--T----TT-T--------C---------TATTTAGC
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26384298 17 +  51448160 T--------T--G--G--T----TC-T--------C---------TGTTCAGT
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        9471 17 -     13118 T--------T--G--G--T----TC-T--------C---------TGTTCAGT
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   48294 17 -     72089 TC-------T-----C--T----TC-T--------G---------TGATCAGT
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   302438 17 -   6870073 TC-------T-----C--T----TC-T--------G---------TGATCAGT
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22956536 17 + 161108492 TC-------T-----C--T----TC-T--------G---------TGATCAGT
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     418777 17 +    998990 TC-------T-----C--T----TC-T--------G---------TGATCAGT
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22665190 17 + 158972876 TC-------T-----C--T----TC-T--------G---------TGATCAGT
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               674944 17 +   1914593 TC-------T-----C--T----TC-T--------G---------TGATCAGT
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               118094  7 -    171031 ----------------------------------------------ATTTTTC
i Cacajao_ayresi.k141_724503                            I 6 C 0
s Cacajao_calvus.k141_96166                                 17114  7 +    125063 ----------------------------------------------ATTTTTC
i Cacajao_calvus.k141_96166                             I 6 C 0
s Cacajao_hosomi.k141_303789                                19161  7 -    216513 ----------------------------------------------ATTTTTC
i Cacajao_hosomi.k141_303789                            I 6 C 0
s Cacajao_melanocephalus.k141_1160263                       11704  7 -    134917 ----------------------------------------------ATTTTTC
i Cacajao_melanocephalus.k141_1160263                   I 6 C 0
s Camelus_bactrianus.KN276303.1                           3223424 17 -   8989139 t----------ct--c--t----tc-t--------c---------tgttcagT
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           401125 17 -  15254737 t----------ct--c--t----tc-t--------c---------tgttcagT
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2976862 17 +   6889770 t----------ct--c--t----tc-t--------c---------tgttcagT
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11526640 19 +  39901454 TC-------TC-T--C--T----TC-T--------C---------TGTTCCAT
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   21614 19 +     87036 TC-------TC-T--C--T----TC-T--------C---------TGTTCCAT
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11273323 19 -  35597290 t--------ctct--c--t----tc-t--------c---------tgttccat
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11096034 19 +  39895921 t--------ctct--c--t----tc-t--------c---------tgttccat
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16462819 19 -  44759192 t--------ctct--c--t----tc-t--------c---------tgttccat
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21333774 17 + 157394656 TC-------T-----C--T----TC-T--------G---------TGATCAGT
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135712129 17 - 157403528 TC-------T-----C--T----TC-T--------G---------TGATCAGT
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_529800                   502 19 -      2320 TC-C-----T--T--C--C----TT-T--------G---------TATTCAGC
i Capromys_pilorides.CapPil_scaffold_529800             C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               62276 19 +     67245 TC-------TC-T--C--T----TC-T--------C---------TGTTcagt
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_1326                      269 21 -    202837 T-A---TC-TCC---A--T----TT-T--------T---------GATTCAAC
i Castor_canadensis.CasCan_scaffold_1326                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   162948 19 -    276539 TC-------TC-T--C--T----TC-T--------C---------TGTTCAGT
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15789963 19 -  24422027 ACA------T--T--C--T----TT-T--------C---------CATTCAGC
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15801902 19 -  24440124 ACA------T--T--C--T----TT-T--------C---------CATTCAGC
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       180074 19 +    436027 ACA------T--T--C--T----TT-T--------C---------CATTCAGC
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18895810 17 -  29618158 T------------ATC--T----TT-T--------T---------TACTTTTC
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                12460 17 -     26817 T------------ATC--T----TT-T--------T---------TACTTTTC
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                16704 17 +     25043 T------------ATC--T----TT-T--------T---------TACTTTTC
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4367877  9 +   7569818 -----------------------------------C---------TCTTCAGT
i Ceratotherium_simum.JH767818.1                        I 3 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         7634  9 -      9338 -----------------------------------C---------TCTTCAGT
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    I 3 C 0
s Cercocebus_atys.KQ012885.1                               183952 17 +  41321030 T------------CTC--T----TT-T--------C---------TGTTTATC
i Cercocebus_atys.KQ012885.1                            n 17 I 69
s Cercocebus_chrysogaster.k141_1635769                       1953 17 +     20388 T------------CTC--T----TT-T--------C---------TGTTTATC
i Cercocebus_chrysogaster.k141_1635769                  n 32 C 0
s Cercocebus_lunulatus.k141_4337841                          5649 17 -     20249 T------------CTC--T----TT-T--------C---------TGTTTATC
i Cercocebus_lunulatus.k141_4337841                     n 17 I 69
s Cercocebus_torquatus.k141_1908611                          2421 17 +      7529 T------------CTC--T----TT-T--------C---------TGTTTATC
i Cercocebus_torquatus.k141_1908611                     n 17 I 69
s Cercopithecus_ascanius.k141_1579766                        2832 17 -      4795 T------------CTT--T----TT-T--------C---------TGTTTATC
i Cercopithecus_ascanius.k141_1579766                   n 32 C 0
s Cercopithecus_cephus.k141_787308                          10715 17 -     21850 T------------CTC--T----TT-T--------C---------TGTTTATC
i Cercopithecus_cephus.k141_787308                      n 17 I 5
s Cercopithecus_diana.k141_650374                            2004 17 -      8439 T------------CTC--T----TT-T--------C---------TGTTTATC
i Cercopithecus_diana.k141_650374                       n 17 I 5
s Cercopithecus_hamlyni.k141_955432                          2778 17 -      7769 T------------CTC--T----TT-T--------C---------TGTTTATC
i Cercopithecus_hamlyni.k141_955432                     n 32 C 0
s Cercopithecus_lowei.k141_1996                              5175 17 -     17229 T------------CTC--T----TT-T--------C---------TGTTTATC
i Cercopithecus_lowei.k141_1996                         n 32 C 0
s Cercopithecus_albogularis.ctg86                                350209 17 +  11364408 T------------CTC--T----TT-T--------C---------TGTTTATC
i Cercopithecus_albogularis.ctg86                             n 32 C 0
s Cercopithecus_mona.ctg21                               13250996 17 -  35162767 T------------CTC--T----TT-T--------C---------TGTTTATC
i Cercopithecus_mona.ctg21                              n 17 I 5
s Cercopithecus_neglectus.k141_1258634                        640 17 -      1218 T------------CTC--T----TT-T--------C---------TGTTTATC
i Cercopithecus_neglectus.k141_1258634                  n 17 I 5
s Cercopithecus_nictitans.k141_298052                       10713 17 +     24998 T------------CTC--T----TT-T--------C---------TGTTTATC
i Cercopithecus_nictitans.k141_298052                   n 17 I 5
s Cercopithecus_petaurista.k141_64532                        6360 17 -     25661 T------------ATC--T----TT-T--------C---------TATTTTTC
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_1631406                         583 17 +     11509 T------------CTC--T----TT-T--------C---------TGTTTATC
i Cercopithecus_pogonias.k141_1631406                   n 32 C 0
s Cercopithecus_roloway.k141_550462                         15213 17 +     34041 T------------CTC--T----TT-T--------C---------TGTTTATC
i Cercopithecus_roloway.k141_550462                     n 32 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           4860 19 -      6963 AC-------T-----CTGC----TC-T--------C---------Tggtcaac
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      I 8 C 0
s Cheirogaleus_major.k141_1157592                           63454 19 -     68416 TC-------T---GTC--T----TT-T--------C---------TATTTAGC
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                           12574 19 +     13308 TC-------T---GTC--T----TT-T--------C---------TATTTAGC
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             9751 12 -     18223 -----------------------TT-T--------C---------TATTTTTC
i Cheracebus_lucifer.k141_619653                        I 4 C 0
s Cheracebus_lugens.k141_996499                              1489 12 +    188999 -----------------------TT-T--------C---------TATTTTTC
i Cheracebus_lugens.k141_996499                         I 4 C 0
s Cheracebus_regulus.k141_2128895                           45788 12 +     57117 -----------------------TT-T--------C---------TATTTTTC
i Cheracebus_regulus.k141_2128895                       I 4 C 0
s Cheracebus_torquatus.k141_315545                          50468 12 +     54541 -----------------------TT-T--------C---------TATTTTTC
i Cheracebus_torquatus.k141_315545                      I 4 C 0
s Chinchilla_lanigera.JH721867.1                         15964654 19 +  43084221 TC-C-----T--T--C--A----TT-T--------C---------TATTCGGC
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         75273  7 +    196370 ----------------------------------------------AATTTTC
i Chiropotes_israelita.k141_1189915                     I 6 C 0
s Chiropotes_sagulatus.k141_773804                          19454  7 +     40510 ----------------------------------------------AATTTTC
i Chiropotes_sagulatus.k141_773804                      I 6 C 0
s Chlorocebus_aethiops.ctg55                              5018264 17 -  11124196 T------------CTC--T----TT-T--------C---------TGTTTATC
i Chlorocebus_aethiops.ctg55                            n 17 I 5
s Chlorocebus_pygerythrus.k141_596994                        4107 17 +     16635 T------------CTC--T----TT-T--------C---------TGTTTATC
i Chlorocebus_pygerythrus.k141_596994                   n 32 C 0
s Chlorocebus_sabaeus.CM001963.2                         13528637 17 + 101219884 T------------CTC--T----TT-T--------C---------TGTTTATC
i Chlorocebus_sabaeus.CM001963.2                        N 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                18971 19 -     21363 TC-------T-----CTAT----TC-T--------C---------Tggtcaac
i Choloepus_didactylus.ChoDid_scaffold_36182            I 8 C 0
s Choloepus_hoffmanni.KN194586.1                           764275 19 +    964067 TC-------T-----CTAT----TC-T--------C---------Tggtcaac
i Choloepus_hoffmanni.KN194586.1                        I 8 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_629495              2516 19 -      3120 TCA------------GTAT----TC-T--------T---------TGGTAAGC
i Chrysochloris_asiatica.ChrAsi_scaffold_629495         C 0 C 0
s Colobus_angolensis.KN983490.1                            283775 17 +    886210 T------------CTC--T----TT-T--------C---------TGTTTATC
i Colobus_angolensis.KN983490.1                         C 0 C 0
s Colobus_guereza.LG08                                   96946664 17 - 156195979 T------------CTC--T----TT-T--------C---------TGTTTATC
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_688201                               327 17 +      1908 T------------CTC--T----TT-T--------C---------TGTTTATC
i Colobus_polykomos.k141_688201                         C 0 C 0
s Condylura_cristata.JH655880.1                          60622436 19 +  78930452 t--------ccct--c--t----tc-t--------t---------tgtTCAGT
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         2806 13 -      5782 ------------------T----CC-T--------C---------TGTTCAGT
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    I 5 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 282925 17 -    399297 TC-------T-----A--T----TT-T--------T---------CATTCAAC
i Cricetomys_gambianus.CriGam_scaffold_949              I 6 C 0
s Cricetulus_griseus.LT883672.1                          53035283 17 +  72327488 AC-------T-----C--C----TT-T--------T---------TATTCACC
i Cricetulus_griseus.LT883672.1                         I 7 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            57789 10 -     70449 --------------------------T--------C---------TGTTTAGT
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 2 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              2373  6 -     22648 TC-------T-----C--T----T-----------------------------
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 I 15
s Ctenodactylus_gundi.CteGun_scaffold_447                  214547 13 -    956709 ------------------T----TT-T--------C---------TATTCAGC
i Ctenodactylus_gundi.CteGun_scaffold_447               I 10 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 34622 19 -     67205 TC-C-----T--T--C--T----TT-T--------C---------TATTCAGG
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                21144 19 +     26546 TC-C-----T--T--C--T----TT-T--------C---------TATTCAGC
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             62283 19 -    236241 TC-C-----T--T--C--T----TT-G--------C---------TATTCATC
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          185943 10 -   6883506 T--------T--T--GTAG----TC-T--------------------------
i Dasypus_novemcinctus.JH568778.1                       I 8 C 0
s Daubentonia_madagascariensis.ctg11                     16849405 19 +  31942871 TC-------T---GTC--T----TT-C--------C---------TATTCAGC
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80040917 17 -  96802777 T--------T--G--G--T----TC-T--------C---------TGTTCAGT
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18701488 19 -  18957592 TC-------TC-A--C--T----TC-T--------C---------TGTTCAGT
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 326525 17 +    993696 ------------------tctcttc-t--------c---------tgttcagT
i Dicerorhinus_sumatrensis.PEKH010003161.1              I 2 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   7165  9 +    151128 -----------------------------------C---------TCTTCAGT
i Diceros_bicornis.DicBicMic_scaffold_9545              I 3 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   159916 12 +    228994 -----------------------TT-T--------C---------TGTTCAGC
i Dinomys_branickii.DinBra_scaffold_1996                I 4 C 0
s Dipodomys_ordii.KN672545.1                              3660605  1 +   4240102 ----------------------------------------------------C
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  2959  1 -     11986 ----------------------------------------------------C
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                40860 19 -     73477 TC-C-----T--T--C--T----TT-T--------C---------TATTCAGC
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           23000181 19 -  44670279 TC-C-----------GTGT----TC-T--------C---------Tggccagc
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1496510 17 +   1727528 t----------ct--c--t----tc-t--------c---------tgatcaGT
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7833237 19 +  15467074 T----G---T-----CTGT----TT-T--------A---------TCattaaa
i Elephantulus_edwardii.JH947210.1                      C 0 I 1209
s Ellobius_lutescens.LOEQ01003611.1                        244090 17 -    369425 AC-------T-----C--T----CT-T--------T---------TATTAAAC
i Ellobius_lutescens.LOEQ01003611.1                     I 7 C 0
s Enhydra_lutris.KZ291749.1                              85877754 19 +  99434291 t--------ctct--c--t----cc-t--------c---------tgtttaGT
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4709242 18 +   6522550 t---------ttt--c--t----tc-t--------c---------tgttcaGT
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5856621 14 -   7175178 ---------------C--T----TC-T--------C---------TGTTcagt
i Equus_asinus.JREZ01000062.1                           I 7 C 0
s Equus_caballus.CM000402.2                              13355121 14 +  41866177 ---------------C--T----TC-T--------C---------TGTTcagt
i Equus_caballus.CM000402.2                             I 7 C 0
s Equus_przewalskii.ATBW01073585.1                          16611 14 +     92910 ---------------c--t----tc-t--------c---------tcttcagt
i Equus_przewalskii.ATBW01073585.1                      I 7 C 0
s Erythrocebus_patas.Contig45                            12732078 17 -  18870230 T------------CTC--T----TT-T--------C---------TGTTTATC
i Erythrocebus_patas.Contig45                           n 17 I 5
s Eschrichtius_robustus.EscRob_flattened_line_685          319141 17 +    330699 T--------T--G--G--T----TC-T--------C---------TGTTCAGT
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             65598 17 +     89355 T--------T--G--G--T----TC-T--------C---------TGTTCAGT
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              9558 19 +     13586 TC-------T---GTC--T----TT-T--------C---------TATTTAGC
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_1015201                              2817 19 -      4292 TC-------T---GTC--T----TT-T--------C---------TATCTAGC
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            15954 19 +     36558 TC-------T---GTC--T----TT-T--------C---------TATTTAGC
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            12276 19 +     60246 TC-------T---GTC--T----TT-T--------C---------TATCTAGC
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                15761 19 +    109717 TC-------T---GTC--T----TT-T--------C---------TATTtagc
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 3744 19 -     19505 TC-------T---GTC--T----TT-T--------C---------TATCTAGC
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                20419 19 +     27497 TC-------T---GTC--T----TT-T--------C---------TATTTAGC
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           22875 19 +     26808 TC-------T---GTC--T----TT-T--------C---------TATTTAGC
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                37607 19 +     46535 TC-------T---GTC--T----TT-T--------C---------TATCTAGC
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              20348 19 -     29447 TC-------T---GTC--T----TT-T--------C---------TATTTAGC
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129899221 19 - 159252932 t--------ctct--c--t----tc-t--------c---------tgttcagT
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129286196 19 - 158578461 t--------ctct--c--t----tc-t--------c---------tgttcagT
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 27295 19 +     52776 TC-------TC-T--C--T----TC-T--------C---------TGTTCAGT
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13896429 19 -  19261668 t--------ctgt--c--t----tt-t--------c---------taaTCGGC
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     215608 19 -    847004 GC-------T---GTC--A----TT-T--------C---------TATTCAGT
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           17969 19 -     43889 GC-------T---GTC--A----TT-T--------C---------TATTCAGT
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          15113 19 +     27357 GC-------T---GTC--A----TT-T--------C---------TATTCAGT
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               159860 19 +    324696 T-------TTC-T--C--T----TT-T--------T---------TATTcagc
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    186296  8 -    189561 ---------------------------------------------AGATCAGT
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           16751 17 -     18683 TC-------T-----G--T----TT-T--------C---------TATTTGCC
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_2641970                               519 17 +      9263 T------------CTC--T----TT-T--------C---------TGTTTATC
i Gorilla_beringei.k141_2641970                         n 21 C 0
s Gorilla_gorilla.LT578340.1                             52344612 17 + 195582420 T------------CTC--T----TT-T--------C---------Tgtttatc
i Gorilla_gorilla.LT578340.1                            n 21 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   80068 17 +    118900 TC-------T-----G--T----TT-T--------C---------TATTTGTC
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         6343 19 +     10286 TC-------T---GTC--T----TT-T--------C---------TATTTAGC
i Hapalemur_alaotrensis.k141_1280836                    I 2 C 0
s Hapalemur_gilberti.k141_279011                             4821 19 -     11661 TC-------T---GTC--T----TT-T--------C---------TATTTAGC
i Hapalemur_gilberti.k141_279011                        I 2 C 0
s Hapalemur_griseus.k141_1387522                            10148 19 +     56096 TC-------T---GTC--T----TT-T--------C---------TATTTAGC
i Hapalemur_griseus.k141_1387522                        I 2 C 0
s Hapalemur_meridionalis.k141_186231                        33397 19 -     42470 TC-------T---GTC--T----TT-T--------C---------TATTTAGC
i Hapalemur_meridionalis.k141_186231                    I 2 C 0
s Hapalemur_occidentalis.k141_797938                        50020 19 -     54384 TC-------T---GTC--T----TT-T--------C---------TATTtagc
i Hapalemur_occidentalis.k141_797938                    I 2 C 0
s Helogale_parvula.HelPar_flattened_line_22962              22929 10 +     53719 --------------------------T--------C---------TGTTCAGT
i Helogale_parvula.HelPar_flattened_line_22962          I 4 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                33179 17 -     91191 TC-------T-----C--T----TC-T--------G---------TGATCAGT
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2560921 19 +  31725842 T-ACA----T-----C--T----TT-T--------C---------TATTCCAC
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               63148 19 +     73687 TC-------T-----CTGT----TC-T--------C---------TGGTGGGC
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              150931 17 +    277961 TC-------T-----C--T----TC-T--------C---------TCTTCAGT
i Hippopotamus_amphibius.HipAmp_scaffold_1308           I 2 C 0
s Hipposideros_armiger.JXIK01001085.1                      283332 13 -    477199 ------------------t----tc-t--------c---------tgttcagt
i Hipposideros_armiger.JXIK01001085.1                   I 5 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959               1102 13 +     26078 ------------------T----TC-T--------C---------TGTTCAGT
i Hipposideros_galeritus.HipGal_scaffold_52959          I 5 I 6
s Hoolock_leuconedys.ctg83                                  28459965 17 -  32676794 T------------CTC--T----TT-T--------C---------TGTTCATC
i Hoolock_leuconedys.ctg83                                 n 21 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 23400 10 -     67322 --------------------------T--------C---------TGTTTAGT
i Hyaena_hyaena.HyaHya_flattened_line_20729             I 4 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           21529 19 -    119109 TC-C-----T--T--C--T----TT-T--------C---------TGTTCAGC
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_1816750                             2020 17 +      3202 T------------ATC--T----TT-T--------C---------TATCTTTC
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1633646                              1990 17 -      2102 T------------ATC--T----TT-T--------C---------TATCTTTC
i Hylobates_agilis.k141_1633646                         C 0 C 0
s Hylobates_klossii.k141_468230                              3508 17 +      5464 T------------ATC--T----TT-T--------C---------TATCTTTC
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14628855 17 -  25970782 T------------ATG--T----TT-T--------C---------TATCTTTC
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            1407 17 +      4161 T------------ATC--T----TT-T--------C---------TATCTTTC
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             37717 17 -     60944 T------------ATC--T----TT-T--------C---------TATCTTTC
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     9824 19 +     22540 TC-C-----T--T--C--T----TT-T--------C---------TATTCACC
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7130665 10 +  13083262 --------------------------T--------T---------TGTTcagc
i Ictidomys_tridecemlineatus.JH393315.1                 I 16 C 0
s Indri_indri.k141_2197838                                   1867 19 +      3484 TC-------T---GTC--T----TT-T--------C---------TATTTAGC
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              13129 17 +     17520 T--------T--G--G--T----TC-T--------C---------TGTTCAGT
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8577699 17 +  11848649 TC-------T-----T--T----AT-T--------C---------TATTCAGC
i Jaculus_jaculus.JH725517.1                            I 1 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               27748 17 +     37189 T--------T--G--G--T----TC-T--------C---------TGTTCAGT
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          54303 17 -    147782 T------------ATC--T----TG-T--------T---------TACTTTTC
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    5852 17 +     26176 T--------T-TT--C--T----TC-T--------C---------T-TTCAGT
i Lasiurus_borealis.LasBor_scaffold_59542               I 9 C 0
s Lemur_catta.scaffold_1                                258411695 19 - 285822530 TC-------T---GTC--T----TT-T--------C---------TATTTAGC
i Lemur_catta.scaffold_1                                I 2 C 0
s Lepilemur_ankaranensis.k141_884009                        29004 19 +     39228 TC-------T---GTC--T----TT-T--------C---------TATTTAGC
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            58368 19 +     63517 TC-------T---GTC--T----TT-T--------C---------TATTTAGC
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        36748 19 -     38897 TC-------T---GTC--T----TT-T--------C---------TATTTAGC
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      2794 19 -     13103 TC-------T---GTC--T----TT-T--------C---------TATTTAGC
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3091731 19 -   3498232 t--------ctct--c--t----tc-t--------c---------tgttcagT
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    21164  7 +     22452 ----------------------------------------------TTTCAAC
i Lepus_americanus.LepAme_scaffold_62849                I 6 C 0
s Lipotes_vexillifer.KE558548.1                            140063 17 +   3060487 T--------T--G--G--T----TC-T--------C---------TATTCAGT
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg711                              183193 17 +    570588 T------------CTC--T----TT-T--------C---------TGTTTATC
i Lophocebus_aterrimus.ctg711                           n 17 I 10
s Loris_lydekkerianus.k141_550999                           15571 19 +     84689 GC-------T---GGC--A----TT-T--------C---------TATTCAGC
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3783310 19 +   6799190 GC-------T---GGC--A----TT-T--------C---------TATTCAGC
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20599070 19 -  62548349 TC-------T-----CTAT----TC-T--------C---------TGGTAAAC
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11095490 19 +  39895028 t--------ctct--c--t----tc-t--------c---------tgttccat
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_1195479                              4904 17 -     15622 C------------CTC--T----TT-T--------C---------TGTTTATC
i Macaca_arctoides.k141_1195479                         n 32 C 0
s Macaca_assamensis.Contig48                             12918946 17 +  19716213 T------------CTC--T----TT-T--------C---------TGTTTATC
i Macaca_assamensis.Contig48                            n 32 C 0
s Macaca_cyclopis.k119_883699                                3525 17 -     26467 T------------ATC--T----TT-T--------C---------TATTTTTC
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_671072                            4800 17 -     23403 T------------CTC--T----TT-T--------C---------TGTTTATC
i Macaca_fascicularis.k141_671072                       n 17 I 69
s Macaca_fuscata.k119_287078                                  557 17 -      9169 T------------CTC--T----TT-T--------C---------TGTTTATC
i Macaca_fuscata.k119_287078                            n 17 n 17
s Macaca_leonina.k141_674993                                 4856 17 +     16544 T------------CTC--T----TT-T--------C---------TGTTTATC
i Macaca_leonina.k141_674993                            n 32 C 0
s Macaca_maura.k141_188832                                   5236 17 -     30208 T------------CTC--T----TT-T--------C---------TGTTTATC
i Macaca_maura.k141_188832                              n 32 C 0
s Macaca_mulatta.NC_041755.1                            108306943 17 + 196197964 T------------CTC--T----TT-T--------C---------TGTTTATC
i Macaca_mulatta.NC_041755.1                            N 0 C 0
s Macaca_nemestrina.KQ009282.1                           23102111 17 +  26856881 T------------CTC--T----TT-T--------C---------TGTTTATC
i Macaca_nemestrina.KQ009282.1                          n 17 n 17
s Macaca_nigra.k141_2105412                                  4764 17 -     16799 T------------CTC--T----TT-T--------C---------TGTTTATC
i Macaca_nigra.k141_2105412                             n 32 C 0
s Macaca_radiata.k141_339052                                 4840 17 -     65833 T------------CTC--T----TT-T--------C---------TGTTTATC
i Macaca_radiata.k141_339052                            n 32 C 0
s Macaca_siberu.k141_901100                                  5206 17 +     15974 T------------CTC--T----TT-T--------C---------TGTTTATC
i Macaca_siberu.k141_901100                             n 32 C 0
s Macaca_silenus.Contig28                                 7966840 17 +  28972174 T------------CTC--T----TT-T--------C---------TGTTTATC
i Macaca_silenus.Contig28                               n 17 I 69
s Macaca_thibetana.k99_374025                                  73 17 +      8300 T------------CTC--T----TT-T--------C---------TGTTTATC
i Macaca_thibetana.k99_374025                           n 17 I 69
s Macaca_tonkeana.k141_476106                                3826 17 -     15846 T------------CTC--T----TT-T--------C---------TGTTTATC
i Macaca_tonkeana.k141_476106                           n 17 I 69
s Mandrillus_leucophaeus.scaffold126                      7795730 17 -  48617986 T------------CTC--T----TT-T--------C---------TGTTTATC
i Mandrillus_leucophaeus.scaffold126                    n 32 C 0
s Mandrillus_sphinx.Contig18                              8135856 17 -  29546661 T------------CTC--T----TT-T--------C---------TGTTTATC
i Mandrillus_sphinx.Contig18                            n 32 C 0
s Manis_javanica.JSZB01003966.1                            152451 15 +    252755 t--------------c--t----cc-t--------c---------tgttcAGT
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             40041 19 +     58827 t--------ctct--c--t----tc-t--------c---------tgttcagT
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36878534 10 +  64221397 --------------------------T--------C---------TGTTcagc
i Marmota_marmota.CZRN01000005.1                        I 16 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       65889 13 -    234502 ------------------C----TC-T--------G---------TGTTTGAC
i Megaderma_lyra.MegLyr_scaffold_3562                   I 5 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             6646 19 -     87323 TC-------TC-T--C--T----TC-T--------C---------TGTTTAGT
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 1542 17 +    115071 TC-------T-----C--A----TG-T--------T---------TATTAAAC
i Meriones_unguiculatus.MerUng_scaffold_9483            I 7 C 0
s Mesocricetus_auratus.KB708139.1                         1051811 17 -  26018355 AC-------T-----C--C----TT-T--------C---------TATTCAAC
i Mesocricetus_auratus.KB708139.1                       I 7 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    2723 14 -     12939 ---------------G--T----TC-T--------C---------TGTTCAGT
i Mesoplodon_bidens.MesBid_scaffold_96348               I 24 C 0
s Microcebus_murinus.CM007691.1                          16514724 19 +  47401472 t----------ctgtc--t----tt-t--------c---------tgtttaGC
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  41740 29 -     48017 TCACAGGCATCCC--ATAT----TC-A--------C---------TGGTCAgc
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               25236 19 -     32043 TC-------TC-T--C--T----TC-T--------C---------TGTTCAGT
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22824887 17 -  98408828 AC-------T-----C--T----CT-T--------T---------TATTAGAC
i Microtus_ochrogaster.CM001673.1                       I 7 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8213291 19 +  10048721 t--------ttct--c--t----tc-t--------c---------tgttcaGT
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            37780 19 +     45743 T-------TTC-T--C--T----TC-T--------C---------TGTTcagt
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         6458 17 +     29742 C------------ATC--T----TT-T--------C---------TATTTTTC
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        17227 19 -    104932 TC-------TC-T--C--T----TC-T--------C---------TGTTCAGT
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     5408 19 -     12809 TC-------T---GTC--T----TT-T--------C---------TGTTTAGC
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 150510 17 +    154973 T--------T--G--G--T----TC-T--------C---------TGTTCAGT
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                163776 10 +    265003 --------------------------T--------C---------TGTTcagt
i Mormoops_blainvillei.MorMeg_scaffold_2952             I 4 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  6528 17 -     19904 TC-------T-----G--T----TC-T--------G---------TGATCAGT
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  150604 10 -    168139 --------------------------T--------C---------TGTTCAGT
i Mungos_mungo.MunMun_flattened_line_8729               I 4 C 0
s Murina_feae.MurFea_scaffold_2254                          24699 18 -    100666 T--------T-TT--C--T----TC-T--------C---------TGTTGAGT
i Murina_feae.MurFea_scaffold_2254                      I 5 C 0
s Mus_caroli.LT608236.1                                  70772117 17 +  92629107 TC-------T-----A--C----TT-T--------T---------TGTTTAAC
i Mus_caroli.LT608236.1                                 I 7 C 0
s Mus_musculus.chr16                                     75494171 17 +  98207768 TC-------T-----A--C----TT-T--------T---------TGTTTAAC
i Mus_musculus.chr16                                    I 7 C 0
s Mus_pahari.LT608305.1                                  67560923 17 +  89017189 TC-------T-----A--C----TT-T--------T---------TGTTTAAC
i Mus_pahari.LT608305.1                                 I 7 C 0
s Mus_spretus.CM004110.1                                 74336897 17 +  97876770 TC-------T-----A--C----TT-T--------T---------TGTTTAAC
i Mus_spretus.CM004110.1                                I 7 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             15156 17 +     98495 TC-------T-----G--T----TT-T--------C---------TATTTGTC
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4428963 19 -  28371801 t--------ctct--c--t----cc-t--------c---------tgtttagt
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     94124 19 -    117718 TC-C-----T--T--C--T----TT-T--------G---------TATTCAGC
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               971577 18 +   8389877 t---------ttt--c--t----tc-t--------c---------tgttcagT
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5022997 18 +   6462685 t---------ttt--c--t----tc-t--------c---------tgttcagt
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3469081 18 -   3747815 t---------ttt--c--t----tc-t--------c---------tgttcagT
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        14322 18 +     66751 T--------T-TT--C--T----TC-T--------C---------TGTTCAGT
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             7936 19 -      8794 TC-------T-----TCAT----TT-T--------C---------TGGTCAAC
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        I 8 C 0
s Nannospalax_galili.KL201303.1                            240900 18 -    362372 T----G-C-T-----C--T----TC-T--------C---------TATTTAAA
i Nannospalax_galili.KL201303.1                         I 1 C 0
s Nasalis_larvatus.k141_1382660                              4110 17 +      5784 T------------CTC--T----TT-T--------C---------TGTTTATC
i Nasalis_larvatus.k141_1382660                         C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4490625 19 -  14209539 t--------ctct--c--t----tc-t--------c---------tgttcagt
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3955101 17 -   4490290 T--------T--G--G--T----TC-T--------C---------TGTTCAGT
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  50835 19 +     94413 T----G---TC-T--C--T----TC-T--------C---------Tgtttagt
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1526257                           6672 17 +     11411 T------------CTC--T----TT-T--------C---------TGTTCATC
i Nomascus_annamensis.k141_1526257                      n 17 I 67
s Nomascus_concolor.k141_523891                              1172 17 +      1566 T------------CTC--T----TT-T--------C---------TGTTCATC
i Nomascus_concolor.k141_523891                         n 21 C 0
s Nomascus_gabriellae.k141_989974                            6407 17 -     13151 T------------CTC--T----TT-T--------C---------TGTTCATC
i Nomascus_gabriellae.k141_989974                       n 17 I 67
s Nomascus_siki_b.tarseq_44                          10087448 17 -  26722205 T------------CTC--T----TT-T--------C---------TGTTCATC
i Nomascus_siki_b.tarseq_44                         n 21 C 0
s Nomascus_siki_a.k141_1166812                                  411 17 -      5137 T------------CTC--T----TT-T--------C---------TGTTCATC
i Nomascus_siki_a.k141_1166812                            n 31 I 67
s Nyctereutes_procyonoides.CAJHUB010000786.1                38355 19 +   3668941 t--------ctct--c--t----tc-t--------c---------tgttccat
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65572234 19 -  95554990 GC-------T---GGT--G----TT-T--------C---------TATTCAGC
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_771591                            15644 19 +     16181 GC-------T---GGT--G----TT-T--------C---------TATTCAGC
i Nycticebus_coucang.k141_771591                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65680422 19 +  89412551 GC-------T---GGC--G----TT-T--------C---------TATTCAGC
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            5000198 13 -  23139505 ------------------T----TT-T--------A---------TATTCAGC
i Ochotona_princeps.JH802095.1                          I 2 C 0
s Octodon_degus.JH651621.1                                3689613 19 +  10294119 t--------cctt--c--t----tt-t--------c---------tattctGC
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             685328 20 -   3126709 TCTCAG---------C--T----TC-T--------C---------TGTTCAGT
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1083958 17 +   1425656 t----------ct--c--t----tc-t--------c---------tgatcaGT
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         42034 17 +     78940 t----------ct--c--t----tc-t--------c---------tgatcaGT
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  130683 17 +    145789 AC-------T-----C--T----CT-T--------T---------TATTTGAC
i Ondatra_zibethicus.OndZib_scaffold_6821               I 7 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  43379 27 +     62360 AC-------T-----C--T----TTTT--------TTTTTTTTTTGATTCAAC
i Onychomys_torridus.OnyTor_scaffold_12578              I 7 C 0
s Orcinus_orca.KB316965.1                                 7228775 17 -   7562323 T--------T--G--G--T----TC-T--------C---------TGTTCAGT
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              64477 19 -     66828 TC---G---------CTAA----TC-T--------C---------Tggtcagc
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141884181  7 + 163896628 ----------------------------------------------ATTCAGC
i Oryctolagus_cuniculus.CM000803.1                      I 6 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      315493 19 -    505867 t--------ctct--c--t----tc-t--------c---------tgttccaT
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        5470 19 -     53940 GC-------T---GTC--A----TC-T--------C---------TATTCAGT
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18013439 19 -  38779656 GC-------T---GTC--A----TC-T--------C---------TATTCAGT
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134082965 17 - 275406953 TC-------T-----C--T----TC-T--------g---------tgatcagt
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      84199 17 +    140051 TC-------T-----C--T----TC-T--------G---------TGATCAGT
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                                53339721 17 + 205426864 T------------CTC--T----TT-T--------C---------TGTTTATC
i Pan_paniscus.CM003386.1                               n 21 C 0
s Pan_troglodytes.CM009241.2                             52442642 17 + 196562556 T------------CTC--T----TT-T--------C---------TGTTTATC
i Pan_troglodytes.CM009241.2                            n 21 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  40215 19 +    295523 TC-------TC-T--C--T----TC-T--------C---------TGTTCAGT
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3644030 19 +  18214204 t--------ctct--c--t----tc-t--------c---------tgttcagT
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5033678 19 -   6340057 t--------ctct--c--t----tc-t--------c---------tgttcagT
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1071836 17 -   1292953 TC-------T-----C--T----TC-T--------G---------TGATCAGT
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               104807413 17 - 188283584 T------------CTC--T----TT-T--------C---------TGTTTATC
i Papio_anubis.CM001492.2                               N 0 C 0
s Papio_cynocephalus.k141_4279166                            1524 17 +     14039 T------------CTC--T----TT-T--------C---------TGTTTATC
i Papio_cynocephalus.k141_4279166                       n 32 C 0
s Papio_hamadryas.Contig2                                43125112 17 -  77290729 T------------CTC--T----TT-T--------C---------TGTTTATC
i Papio_hamadryas.Contig2                               n 32 C 0
s Papio_kindae.k141_3207681                                 22578 17 +     50820 T------------CTC--T----TT-T--------C---------TGTTTATC
i Papio_kindae.k141_3207681                             n 32 C 0
s Papio_papio.k141_1769448                                   5229 17 -     34951 T------------CTC--T----TT-T--------C---------TGTTTATC
i Papio_papio.k141_1769448                              n 17 I 10
s Papio_ursinus.k141_4903560                                 1501 17 +     19798 T------------CTC--T----TT-T--------C---------TGTTTATC
i Papio_ursinus.k141_4903560                            n 17 I 10
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    121706 10 -    135482 --------------------------T--------C---------TGTTCAGT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 I 4 C 0
s Perodicticus_ibeanus.k141_117958                          11134 19 -     23713 GC-------T---GTT--A----TT-T--------C---------TATTCAGC
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           12285 19 +     61070 GC-------T---GTT--A----TT-T--------C---------TATTCAGC
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       2558 19 +     49596 TC-------T-----C--T----CT-T--------CTT-------TATTCAGT
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4955744 18 -   8017169 AC-------T-----C--A----TTTT--------T---------TATTCAAC
i Peromyscus_maniculatus.KI615518.1                     I 7 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              3242 17 +      8220 T--------T--G--G--T----TC-T--------C---------TGTTCGGT
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Piliocolobus_badius.k141_512007                           29634 17 +     37672 T------------CTC--T----TT-T--------C---------TGTTTATC
i Piliocolobus_badius.k141_512007                       C 0 C 0
s Piliocolobus_gordonorum.k141_736355                       29551 17 +     67079 T------------CTC--T----TT-T--------C---------TGTTTATC
i Piliocolobus_gordonorum.k141_736355                   C 0 C 0
s Piliocolobus_kirkii.k141_451083                            4715 17 -     13367 T------------CTC--T----TT-T--------C---------TGTTTATC
i Piliocolobus_kirkii.k141_451083                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000342.1                3428316 17 -   4356645 T------------CTC--T----TT-T--------C---------TGTTTATC
i Piliocolobus_tephrosceles.PDMG02000342.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            99859 18 +    112873 T--------T-TT--C--T----TC-T--------C---------TGTTCAGT
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           9692 14 +     21690 ---------------G--T----TC-T--------C---------TGTTCAGT
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       26400 12 +     44506 -----------------------TT-T--------C---------TATTTTTC
i Plecturocebus_bernhardi.k141_959214                   I 4 C 0
s Plecturocebus_brunneus.k141_498086                        26613 12 +     67491 -----------------------TT-T--------C---------TATTTTTC
i Plecturocebus_brunneus.k141_498086                    I 4 C 0
s Plecturocebus_caligatus.k141_2539816                      16852 12 -     98129 -----------------------TT-T--------C---------TATTTTTC
i Plecturocebus_caligatus.k141_2539816                  I 4 C 0
s Plecturocebus_cinerascens.k141_744510                     26453 12 +    147771 -----------------------TT-T--------C---------TATTTTTC
i Plecturocebus_cinerascens.k141_744510                 I 4 C 0
s Plecturocebus_cupreus.k141_1145860                         3088 12 -     43940 -----------------------TT-T--------C---------TATTTTTC
i Plecturocebus_cupreus.k141_1145860                    I 4 C 0
s Plecturocebus_dubius.k141_3565563                          7171 12 -     55515 -----------------------TT-T--------C---------TATTTTTC
i Plecturocebus_dubius.k141_3565563                     I 4 C 0
s Plecturocebus_grovesi.k141_242819                         26525 12 +    152463 -----------------------TT-T--------C---------TATTTTTC
i Plecturocebus_grovesi.k141_242819                     I 4 C 0
s Plecturocebus_hoffmannsi.k141_985533                       4333 12 -    119457 -----------------------TT-T--------C---------TATTTTTC
i Plecturocebus_hoffmannsi.k141_985533                  I 4 C 0
s Plecturocebus_miltoni.k141_841561                         16247 12 +    134592 -----------------------TT-T--------C---------TATTTTTC
i Plecturocebus_miltoni.k141_841561                     I 4 C 0
s Plecturocebus_moloch.k141_890597                          26835 12 -     75465 -----------------------TT-T--------C---------TATTTTTC
i Plecturocebus_moloch.k141_890597                      I 4 C 0
s Pongo_abelii.CM009265.2                               104014409 17 - 193656255 T------------CTC--T----TT-T--------C---------TGTTTATC
i Pongo_abelii.CM009265.2                               n 21 C 0
s Pongo_pygmaeus.ctg127                                   6237371 17 -   6432864 T------------CTC--T----TT-T--------C---------TGTTTATC
i Pongo_pygmaeus.ctg127                                 n 21 C 0
s Presbytis_comata.k141_678168                              10841 17 +     11126 T------------CTC--T----TT-T--------C---------TGTTTATC
i Presbytis_comata.k141_678168                          C 0 C 0
s Presbytis_mitrata.k141_1767317                            10830 17 +     15869 T------------CTC--T----TT-T--------C---------TGTTTATC
i Presbytis_mitrata.k141_1767317                        C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                4254 19 -      9567 TC-------T-----CTGT----TC-T--------C---------TGGTGAGC
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6853069 19 +  12164890 t----------ctgtc--t----tt-t--------c---------tattTAGC
i Prolemur_simus.MPIZ01000048.1                         I 2 C 0
s Propithecus_coquerelli.NW_012147863.1                     21876 19 -     30946 N----------NNNNN--N----NN-N--------N---------NNNNNNNN
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         8153 19 +     11805 TC-------T---GTC--T----TT-T--------C---------TATTTAGC
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           47487 19 +     52369 TC-------T---GTC--T----TT-T--------C---------TATTTAGC
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         39874 19 -     44753 TC-------T---GTC--T----TT-T--------C---------TATTTAGC
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            21797 19 +     27322 TC-------T---GTC--T----TT-T--------C---------TATTTAGC
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       21446 19 -     53241 TC-------T---GTC--T----TT-T--------C---------TATTTAGC
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         43709 19 -     48185 TC-------T---GTC--T----TT-T--------C---------TATTTAGC
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           38537 17 +     77221 TC-------T-----C--A----TG-T--------T---------TATTGAAC
i Psammomys_obesus.NESX01026517.1                       I 7 C 0
s Pteronotus_parnellii.KE867983.1                            6415 19 -     27784 t--------ctct--a--t----tc-t--------C---------TGTTCAGT
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        250610 19 -    344369 TC-------TC-T--C--T----CC-T--------C---------TGTTTAGT
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Puma_concolor.QAVW01000427.1                          131540327 19 - 161321710 t--------ctct--c--t----tc-t--------t---------tgttcagt
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_951151                              2867 17 -      8225 T------------CTC--T----TT-T--------C---------TGTTTATC
i Pygathrix_cinerea.k141_951151                         C 0 C 0
s Pygathrix_nigripes_b.ctg25                                14340703 17 -  15297009 T------------CTC--T----TT-T--------C---------TGTTTATC
i Pygathrix_nigripes_b.ctg25                               C 0 C 0
s Pygathrix_nigripes_a.k141_758202                             2884 17 -      8240 T------------CTC--T----TT-T--------C---------TGTTTATC
i Pygathrix_nigripes_a.k141_758202                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                20823 17 +     68503 TC-------T-----C--T----TC-T--------C---------TGATCAGT
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13917956 25 +  90463843 t----------ct--a--t----at-tttgtttgtt---------tgtttaac
i Rattus_norvegicus.chr11                               I 7 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1792931 12 +   2252614 ------------------T----TG-T--------G---------TGATCA-T
i Rhinolophus_sinicus.LVEH01000179.1                    I 5 C 0
s Rhinopithecus_roxellana.NC_044549.1                   152255166 17 - 206558726 T------------CTC--T----TT-T--------C---------TGTTTATC
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg241                            461974 17 +   1472273 T------------CTC--T----TT-T--------C---------TGTTTATC
i Rhinopithecus_strykeri.ctg241                         C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                      1234 17 -      4338 TC-------T-----C--T----TC-T--------G---------TGATCAGT
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15676852 17 -  43202129 t------------atc--t----tt-t--------t---------tacttttc
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        8765 17 +     34089 T------------ATC--T----TT-T--------T---------TACTTTTC
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              8705 17 -     60842 T------------ATC--T----TT-T--------T---------TACTTTTC
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              8799 17 +     67014 T------------ATC--T----TT-T--------T---------TACTTTTC
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              8776 17 +     60816 T------------ATC--T----TT-T--------T---------TACTTTTC
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 8713 17 -     76454 T------------ATC--T----TT-T--------T---------TACTTTTC
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17345498 17 -  30362882 T------------ATC--T----TT-T--------T---------TACTTTTC
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         24819 17 -     62485 T------------ATC--T----TT-T--------T---------TACTTTTC
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   39910 19 -    114521 T--------TCCT--C--T----TC-T--------T---------TGTTCAGT
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1743075                       45412 17 +     45790 T------------CTC--T----TT-T--------C---------TGTTTACC
i Semnopithecus_entellus.k141_1743075                   C 0 C 0
s Semnopithecus_hypoleucos.k141_2141024                      1185 17 -      8815 T------------CTC--T----TT-T--------C---------TGTTTACC
i Semnopithecus_hypoleucos.k141_2141024                 C 0 C 0
s Semnopithecus_johnii.k141_1300894                          1202 17 +     13764 T------------CTC--T----TT-T--------C---------TGTTTACC
i Semnopithecus_johnii.k141_1300894                     C 0 C 0
s Semnopithecus_priam.k141_368201                            9941 17 -     20692 T------------CTC--T----TT-T--------C---------TGTTTACC
i Semnopithecus_priam.k141_368201                       C 0 C 0
s Semnopithecus_schistaceus.k141_628310                     45486 17 -     53123 T------------CTC--T----TT-T--------C---------TGTTTACC
i Semnopithecus_schistaceus.k141_628310                 C 0 C 0
s Semnopithecus_vetulus.k141_748269                          4540 17 +     17284 T------------CTC--T----TT-T--------C---------TGTTTACC
i Semnopithecus_vetulus.k141_748269                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  105746 17 -    120886 AC-------T-----T--T----TT-T--------A---------AAATCAAT
i Sigmodon_hispidus.SigHis_scaffold_11332               I 7 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            23868 10 +    739146 --------------------------T--------T---------TGTTAAAT
i Solenodon_paradoxus.SolPar_flattened_line_1012        I 4 C 0
s Spermophilus_dauricus.KZ294190.1                        2244367 10 +   2842873 --------------------------T--------T---------TGTTcagc
i Spermophilus_dauricus.KZ294190.1                      I 16 C 0
s Sorex_araneus.JH798170.1                               17774095  6 -  27805282 t----------tt--c--t----t-----------------------------
i Sorex_araneus.JH798170.1                              C 0 I 13
s Spilogale_gracilis.SpiGra_flattened_line_905             239397 19 -    276980 TC-------TC-T--C--T----TC-T--------C---------TGTTCAGT
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            33521 10 +     62062 --------------------------T--------C---------TGTTCAGT
i Suricata_suricatta.SurSur_flattened_line_20339        I 4 C 0
s Sus_scrofa.CM000824.4                                 189275304 17 + 218635234 t----------ct--c--t----tc-t--------c---------tgttcaGT
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_190                     4045841 17 -  10168602 T------------CTC--T----TT-T--------C---------TGTTCATC
i Symphalangus_syndactylus.tarseq_190                   n 21 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                2645 19 +     20549 T-------TTC-T--C--T----TC-C--------C---------TGTTCAGT
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               17609 19 +     45698 TC-------T-----TCAT----TT-T--------C---------TGGTCAAC
i Tamandua_tetradactyla.TamTet_scaffold_26877           I 8 C 0
s Tapirus_indicus.TapInd_scaffold_176                      811109 13 +   1148477 ------------------T----TT-T--------C---------TGTTCAGT
i Tapirus_indicus.TapInd_scaffold_176                   I 2 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  61751 13 +     99546 ------------------T----TC-T--------C---------TGTTCAGT
i Tapirus_terrestris.TapTer_scaffold_14939              I 2 C 0
s Theropithecus_gelada.CM009951.1                       106203215 17 - 194193292 T------------CTC--T----TT-T--------C---------TGTTTATC
i Theropithecus_gelada.CM009951.1                       N 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                   700 19 -      3104 TC-------T-----CTGT----TC-T--------C---------TGGTCAAC
i Tolypeutes_matacus.TolMat_scaffold_475685             I 8 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  138415 13 -    259118 ------------------T----TC-T--------C---------TGTTCAGT
i Tonatia_saurophila.TonSau_scaffold_3334               I 5 C 0
s Trachypithecus_auratus.k141_672638                         4785 17 +     38635 T------------CTC--T----TT-T--------C---------TGTTTATC
i Trachypithecus_auratus.k141_672638                    C 0 C 0
s Trachypithecus_crepusculus.k141_863597                     4778 17 -     23436 T------------CTC--T----TT-T--------C---------TGTTTATC
i Trachypithecus_crepusculus.k141_863597                C 0 C 0
s Trachypithecus_cristatus.k141_968903                      32427 17 +     43409 T------------CTC--T----TT-T--------C---------TGTTTATC
i Trachypithecus_cristatus.k141_968903                  C 0 C 0
s Trachypithecus_francoisi.k141_1012484                       711 17 +      8809 T------------CTC--T----TT-T--------C---------TGTTTATC
i Trachypithecus_francoisi.k141_1012484                 C 0 C 0
s Trachypithecus_geei.k141_137495                           29940 17 -     42322 T------------CTC--T----TT-T--------C---------TGTTTATC
i Trachypithecus_geei.k141_137495                       C 0 C 0
s Trachypithecus_germaini.k141_240878                        4905 17 -     24955 T------------CTC--T----TT-T--------C---------TGTTTATC
i Trachypithecus_germaini.k141_240878                   C 0 C 0
s Trachypithecus_hatinhensis.k141_641377                     1076 17 +      1365 T------------CTC--T----TT-T--------C---------TGTTTATC
i Trachypithecus_hatinhensis.k141_641377                C 0 C 0
s Trachypithecus_laotum.k141_897381                         45480 17 -     53586 T------------CTC--T----TT-T--------C---------TGTTTATC
i Trachypithecus_laotum.k141_897381                     C 0 C 0
s Trachypithecus_leucocephalus.k141_352489                   1051 17 +      9423 T------------CTC--T----TT-T--------C---------TGTTTATC
i Trachypithecus_leucocephalus.k141_352489              C 0 C 0
s Trachypithecus_melamera.k141_950981                        2066 17 -      3512 T------------CTC--T----TT-T--------C---------TGTTTATC
i Trachypithecus_melamera.k141_950981                   C 0 C 0
s Trachypithecus_obscurus.k141_588024                        4790 17 +      4963 T------------CTC--T----TT-T--------C---------TGTTTATC
i Trachypithecus_obscurus.k141_588024                   C 0 C 0
s Trachypithecus_phayrei.ctg364                            232289 17 -   1198723 T------------CTC--T----TT-T--------C---------TGTTTATC
i Trachypithecus_phayrei.ctg364                         C 0 C 0
s Trachypithecus_pileatus.k141_532233                       29960 17 -     40754 T------------CTC--T----TT-T--------C---------TGTTTATC
i Trachypithecus_pileatus.k141_532233                   C 0 C 0
s Trichechus_manatus.JH594618.1                          16090142 19 +  31416278 TC-------T-----CTAT----TA-A--------C---------TGGTAAGC
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2798075 19 -   3938065 t--------ctct--c--t----tt-t--------c---------ttttcaac
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                   10007 19 +     13056 TC-------TC-T--C--T----TT-C--------C---------TATTCAAC
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69317504 17 -  96451834 T--------T--G--G--T----TC-T--------C---------TGTTCAGT
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                     366 19 +    136657 TC-C-----T--T--C--T----TC-T--------T---------TGTTCAGT
i Uropsilus_gracilis.UroGra_scaffold_4115               I 13 C 0
s Ursus_maritimus.KK498671.1                              6521030 19 +  28682327 t--------ctct--c--t----tc-t--------c---------tgttcagT
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  9712 19 -     20643 TC-------T---GTC--T----TT-T--------C---------TGTTTAGG
i Varecia_rubra.k141_432109                             I 2 C 0
s Varecia_variegata.k141_775891                             29247 19 -     33872 TC-------T---GTC--T----TT-T--------C---------TGTTTAGG
i Varecia_variegata.k141_775891                         I 2 C 0
s Vicugna_pacos.KN269600.1                                1528532 17 -   2331223 t----------ct--c--t----tc-t--------c---------tgttcagT
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                144720 19 -    281493 TC-------TC-T--C--T----TC-T--------C---------TGTTCCAT
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       131856 10 -    134049 --------------------------T--------C---------TATTCAGC
i Xerus_inauris.XerIna_scaffold_7898                    I 4 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        220186 19 -    227762 TC-------TC-T--C--T----TC-T--------C---------TGTTCAGT
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_256618                      434 17 -      2259 TC-------T-----T--T----AT-T--------C---------TATTCAGC
i Zapus_hudsonius.ZapHud_scaffold_256618                I 1 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            2231 14 -     13665 ---------------G--T----TC-T--------C---------TGTTCAGT
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Petromus_typicus.PetTyp_scaffold_33007                    17492  0 -     36578 C
e Erinaceus_europaeus.JH835290.1                         11541587 40 +  16010500 I
e Tragulus_javanicus.TraJav_scaffold_14717                   9488 743 +     90398 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Tarsius_wallacei.k141_48636                               64696  0 +     65473 C
e Tarsius_lariang.k141_609102                               31387  0 +     42269 C
e Rhinopithecus_bieti.k119_554384                            2917  0 -     17045 C
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Cephalopachus_bancanus.k141_702587                        12545  0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530  0 +    345090 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               17852 4 +    209709 AT----GG
s Acinonyx_jubatus.LLWD01000356.1                         2039820 4 +   3721120 at----ga
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    118156 4 -    189883 tt----ga
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10663781 4 +  23371972 at----ga
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7100310 4 -  16596857 AT----GA
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_141108                    709 4 -      7259 ac----ag
i Allactaga_bullata.AllBul_scaffold_141108              C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   5727 4 -     60446 AT----GG
i Allenopithecus_nigroviridis.k141_2469532              I 17 C 0
s Allochrocebus_lhoesti.k141_2676980                        46426 4 +     59001 AT----GG
i Allochrocebus_lhoesti.k141_2676980                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         5382 4 +     38766 AT----GG
i Allochrocebus_preussi.k141_1108977                    I 17 C 0
s Allochrocebus_solatus.k141_3029467                         1058 4 +      1260 AT----GG
i Allochrocebus_solatus.k141_3029467                    C 0 C 0
s Alouatta_belzebul.k141_276091                              1321 4 +     19852 AT----GG
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                3565 4 -     12443 AT----GG
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                              864 4 +      5070 AT----GG
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                  609 4 -      1641 AT----GG
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          3348 4 -     24210 AT----GG
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           29930 4 -     30219 AT----GG
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_405616                              5766 4 +     16794 AT----GG
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                             898 4 -      1470 AT----GG
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             5043 4 -      9835 AT----GG
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3525847 2 +   4113121 ------GG
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      392874 4 -    631301 AT----GG
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             3280 2 +     55446 ------GG
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 66652 4 +     78111 AT----GG
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            9600 4 +     22701 AT----GG
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5753557 4 +   9889416 at----gg
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                            10156 4 -    104377 AT----GG
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                              10163 4 +     23246 AT----GG
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     2692 4 +     11424 AT----GG
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        6780 4 +      9265 TG----GG
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                11279 4 -     29036 AT----GG
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9543451 4 +  39197703 AT----GG
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             64725 4 +     85812 AT----GG
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                15738 4 +     89302 AT----GG
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             20239 4 -     58268 AT----GG
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             68233 4 +    119057 AT----GG
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              10202 4 -     25888 AT----GG
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                11264 4 -     16375 CC----GG
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               4880 4 +      6337 CT----GG
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26384315 4 +  51448160 AC----AA
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        9488 4 -     13118 AC----AA
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   48311 2 -     72089 ------GG
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   302455 2 -   6870073 ------GG
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22956553 2 + 161108492 ------GG
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     418794 2 +    998990 ------GG
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22665207 2 + 158972876 ------GG
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               674961 2 +   1914593 ------GG
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               118101 4 -    171031 AT----GG
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 17121 4 +    125063 AT----GG
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                19168 4 -    216513 AT----GG
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       11711 4 -    134917 AT----GG
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3223441 4 -   8989139 AT----GG
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           401142 4 -  15254737 AT----GG
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2976879 4 +   6889770 AT----GG
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11526659 4 +  39901454 AT----GA
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   21633 4 +     87036 AT----GA
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11273342 4 -  35597290 AT----GA
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11096053 4 +  39895921 AT----GA
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16462838 4 -  44759192 AT----GA
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21333791 2 + 157394656 ------GG
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135712146 2 - 157403528 ------GG
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_529800                   521 4 -      2320 AT----TG
i Capromys_pilorides.CapPil_scaffold_529800             C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               62295 4 +     67245 at----gg
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_1326                      290 4 -    202837 AT----GG
i Castor_canadensis.CasCan_scaffold_1326                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   162967 4 -    276539 AT----GG
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15789982 4 -  24422027 AT----GG
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15801921 4 -  24440124 AT----GG
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       180093 4 +    436027 AT----GG
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18895827 4 -  29618158 AC----AG
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                12477 4 -     26817 AC----AG
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                16721 4 +     25043 AC----AG
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4367886 4 +   7569818 AT----GG
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         7643 4 -      9338 AT----GG
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6559668 4 +   6739814 at----gg
i Cercocebus_atys.KQ010443.1                            I 17 C 0
s Cercocebus_chrysogaster.k141_1635769                       1970 4 +     20388 AT----GG
i Cercocebus_chrysogaster.k141_1635769                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          6349 4 -     21101 AT----GG
i Cercocebus_lunulatus.k141_4634644                     I 17 C 0
s Cercocebus_torquatus.k141_3969582                         63659 4 -    107033 AT----GG
i Cercocebus_torquatus.k141_3969582                     I 17 C 0
s Cercopithecus_ascanius.k141_1579766                        2849 4 -      4795 AT----GG
i Cercopithecus_ascanius.k141_1579766                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          3687 4 +     45019 AT----GG
i Cercopithecus_cephus.k141_3893260                     I 17 C 0
s Cercopithecus_diana.k141_2561715                           3963 4 +     15177 AT----GG
i Cercopithecus_diana.k141_2561715                      I 17 C 0
s Cercopithecus_hamlyni.k141_955432                          2795 4 -      7769 AT----GG
i Cercopithecus_hamlyni.k141_955432                     C 0 C 0
s Cercopithecus_lowei.k141_1996                              5192 4 -     17229 AT----GG
i Cercopithecus_lowei.k141_1996                         C 0 C 0
s Cercopithecus_albogularis.ctg86                                350226 4 +  11364408 AT----GG
i Cercopithecus_albogularis.ctg86                             C 0 C 0
s Cercopithecus_mona.ctg12                               46482266 4 +  46592721 AT----GG
i Cercopithecus_mona.ctg12                              I 17 C 0
s Cercopithecus_neglectus.k141_2169300                        383 4 -     27215 AT----GG
i Cercopithecus_neglectus.k141_2169300                  I 17 C 0
s Cercopithecus_nictitans.k141_1129315                       6583 4 +     35577 AT----GG
i Cercopithecus_nictitans.k141_1129315                  I 17 C 0
s Cercopithecus_petaurista.k141_64532                        6377 4 -     25661 AT----GG
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_1631406                         600 4 +     11509 AT----GG
i Cercopithecus_pogonias.k141_1631406                   C 0 C 0
s Cercopithecus_roloway.k141_550462                         15230 4 +     34041 AT----GG
i Cercopithecus_roloway.k141_550462                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           4879 4 -      6963 at----gg
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           63473 4 -     68416 TT----GG
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                           12593 4 +     13308 TT----GG
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             9763 4 -     18223 AT----GG
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              1501 4 +    188999 AT----GG
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           45800 4 +     57117 AT----GG
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          50480 4 +     54541 AT----GG
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15964673 4 +  43084221 AC----TG
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         75280 4 +    196370 AT----GG
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          19461 4 +     40510 AT----GG
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15144103 4 -  15256731 AT----GG
i Chlorocebus_aethiops.ctg22                            I 17 C 0
s Chlorocebus_pygerythrus.k141_596994                        4124 4 +     16635 AT----GG
i Chlorocebus_pygerythrus.k141_596994                   C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                         13528654 4 + 101219884 AT----GG
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                18990 4 -     21363 at----gg
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           764294 4 +    964067 at----gg
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_629495              2535 4 -      3120 AA----AA
i Chrysochloris_asiatica.ChrAsi_scaffold_629495         C 0 C 0
s Colobus_angolensis.KN983490.1                            283792 4 +    886210 AT----GG
i Colobus_angolensis.KN983490.1                         C 0 C 0
s Colobus_guereza.LG08                                   96946681 4 - 156195979 AT----GG
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_688201                               344 4 +      1908 AT----GG
i Colobus_polykomos.k141_688201                         C 0 C 0
s Condylura_cristata.JH655880.1                          60622455 4 +  78930452 AC----GG
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         2819 4 -      5782 AT----GA
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 282942 4 -    399297 AT----GA
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53035300 4 +  72327488 AT----GG
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              2394 4 -     22648 AA----AA
i Crocidura_indochinensis.CroInd_scaffold_27484         I 15 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            57799 4 -     70449 AT----GA
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  214560 4 -    956709 CT----CA
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 34641 4 -     67205 AT----TG
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                21163 4 +     26546 AT----GG
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             62302 4 -    236241 AT----GG
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16849424 4 +  31942871 TT----GG
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80040934 4 -  96802777 AC----AA
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18701507 4 -  18957592 AT----GG
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 326542 4 +    993696 AT----GG
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   7174 4 +    151128 AT----GG
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   159928 4 +    228994 AT----TG
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3660606 4 +   4240102 AT----GG
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  2960 4 -     11986 AT----GG
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                40879 4 -     73477 AT----GG
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           23000200 4 -  44670279 at----ac
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1496527 2 +   1727528 ------GG
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7834465 4 +  15467074 at----aa
i Elephantulus_edwardii.JH947210.1                      I 1209 C 0
s Ellobius_lutescens.LOEQ01003611.1                        244107 4 -    369425 AT----GG
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Enhydra_lutris.KZ291749.1                              85877773 4 +  99434291 AT----GA
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4709260 4 +   6522550 AT----GA
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5856635 4 -   7175178 at----gg
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13355135 4 +  41866177 at----gg
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          16625 4 +     92910 at----gg
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erythrocebus_patas.Contig8                             48781136 4 -  48907691 AT----GG
i Erythrocebus_patas.Contig8                            I 17 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          319158 4 +    330699 AC----AA
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             65615 4 +     89355 AC----AA
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              9577 4 +     13586 GT----GG
i Eulemur_albifrons.k141_715837                         C 0 I 2
s Eulemur_collaris.k141_1015201                              2836 4 -      4292 TT----GG
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            15973 4 +     36558 TT----GG
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            12295 4 +     60246 TT----GG
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                15780 4 +    109717 at----gg
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 3763 4 -     19505 TT----GG
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                20438 4 +     27497 GT----GG
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           22894 4 +     26808 TT----GG
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                37626 4 +     46535 TT----GG
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              20367 4 -     29447 AT----GG
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129899240 4 - 159252932 AT----GA
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129286215 4 - 158578461 AT----GA
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 27314 4 +     52776 AT----GA
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13896448 4 -  19261668 AT----GG
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     215627 4 -    847004 TG----GG
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           17988 4 -     43889 TG----GG
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          15132 4 +     27357 TG----GG
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               159879 4 +    324696 at----gg
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    186304 2 -    189561 ------GG
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           16768 4 -     18683 AT----GG
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_2641970                               536 4 +      9263 AT----GG
i Gorilla_beringei.k141_2641970                         C 0 I 1
s Gorilla_gorilla.LT578340.1                             52344629 4 + 195582420 at----gg
i Gorilla_gorilla.LT578340.1                            C 0 I 1
s Graphiurus_murinus.GraMur_scaffold_4493                   80085 4 +    118900 AT----AG
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         6362 4 +     10286 TT----GT
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             4840 4 -     11661 TT----GT
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                            10167 4 +     56096 TT----GT
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        33416 4 -     42470 TT----GT
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        50039 4 -     54384 tt----gt
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              22939 4 +     53719 AT----GA
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                33196 2 -     91191 ------GG
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2560940 4 +  31725842 AT----GG
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               63167 4 +     73687 CT----AG
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              150948 4 +    277961 AT----GA
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      283345 4 -    477199 at----gg
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_7653                5897 8 +     86108 atggatgg
i Hipposideros_galeritus.HipGal_scaffold_7653           I 50 C 0
s Hoolock_leuconedys.ctg83                                  28459982 4 -  32676794 AT----GG
i Hoolock_leuconedys.ctg83                                 C 0 I 1
s Hyaena_hyaena.HyaHya_flattened_line_20729                 23410 4 -     67322 AT----GA
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           21548 4 -    119109 AT----GG
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_1816750                             2037 4 +      3202 AT----GG
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1633646                              2007 4 -      2102 AT----GG
i Hylobates_agilis.k141_1633646                         C 0 C 0
s Hylobates_klossii.k141_468230                              3525 4 +      5464 AT----GG
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14628872 4 -  25970782 AT----GG
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            1424 4 +      4161 AT----GG
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             37734 4 -     60944 AT----GG
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     9843 4 +     22540 AT----GG
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7130675 4 +  13083262 at----gg
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   1886 4 +      3484 TT----GG
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              13146 4 +     17520 AC----AA
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8577716 4 +  11848649 Ac----ag
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               27765 4 +     37189 AC----AA
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          54320 4 -    147782 AT----GG
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    5869 3 +     26176 AT----G-
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258411714 4 - 285822530 TT----GT
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        29023 4 +     39228 TT----GG
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            58387 4 +     63517 TT----GG
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        36767 4 -     38897 TT----GG
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      2813 4 -     13103 TT----GG
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3091750 4 -   3498232 AT----GA
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    21171 4 +     22452 AG----GG
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            140080 4 +   3060487 AC----AA
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19252757 4 +  19376315 AT----GG
i Lophocebus_aterrimus.ctg55                            I 17 C 0
s Loris_lydekkerianus.k141_550999                           15590 4 +     84689 TG----AG
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3783329 4 +   6799190 TG----AG
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20599089 4 -  62548349 AT----AG
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11095509 4 +  39895028 AT----GA
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_1195479                              4921 4 -     15622 AT----GG
i Macaca_arctoides.k141_1195479                         C 0 C 0
s Macaca_assamensis.Contig48                             12918963 4 +  19716213 AT----GG
i Macaca_assamensis.Contig48                            C 0 C 0
s Macaca_cyclopis.k119_883699                                3542 4 -     26467 AT----GG
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           51413 4 +     63263 AT----GG
i Macaca_fascicularis.k141_155037                       I 17 C 0
s Macaca_fuscata.k119_938422                                 3523 4 -     26361 AT----GG
i Macaca_fuscata.k119_938422                            I 17 C 0
s Macaca_leonina.k141_674993                                 4873 4 +     16544 AT----GG
i Macaca_leonina.k141_674993                            C 0 C 0
s Macaca_maura.k141_188832                                   5253 4 -     30208 AT----GG
i Macaca_maura.k141_188832                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            108306960 4 + 196197964 AT----GG
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11450210 4 +  11645122 at----gg
i Macaca_nemestrina.KQ004885.1                          I 17 C 0
s Macaca_nigra.k141_2105412                                  4781 4 -     16799 AT----GG
i Macaca_nigra.k141_2105412                             C 0 C 0
s Macaca_radiata.k141_339052                                 4857 4 -     65833 AT----GG
i Macaca_radiata.k141_339052                            C 0 C 0
s Macaca_siberu.k141_901100                                  5223 4 +     15974 AT----GG
i Macaca_siberu.k141_901100                             C 0 C 0
s Macaca_silenus.Contig12                                43845354 4 +  43892939 AT----GG
i Macaca_silenus.Contig12                               I 17 C 0
s Macaca_thibetana.k99_662710                               21523 4 -     24607 AT----GG
i Macaca_thibetana.k99_662710                           I 17 C 0
s Macaca_tonkeana.k141_2870633                               8893 4 -     27140 AT----GG
i Macaca_tonkeana.k141_2870633                          I 17 C 0
s Mandrillus_leucophaeus.scaffold126                      7795747 4 -  48617986 AT----GG
i Mandrillus_leucophaeus.scaffold126                    C 0 C 0
s Mandrillus_sphinx.Contig18                              8135873 4 -  29546661 AT----GG
i Mandrillus_sphinx.Contig18                            C 0 C 0
s Manis_javanica.JSZB01003966.1                            152466 4 +    252755 AC----GG
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             40060 4 +     58827 AC----AG
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36878544 4 +  64221397 at----gg
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       65902 4 -    234502 AT----GG
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             6665 4 -     87323 AT----GA
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 1559 4 +    115071 AT----GG
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1051828 4 -  26018355 AC----AG
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    2737 4 -     12939 AC----AA
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16514743 4 +  47401472 TT----GG
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  41769 2 -     48017 a------c
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               25255 4 -     32043 AT----GA
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22824904 4 -  98408828 AT----GG
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8213310 4 +  10048721 gt----ga
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            37799 4 +     45743 gt----ga
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         6475 4 +     29742 AT----GG
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        17246 4 -    104932 AT----GA
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     5427 4 -     12809 TT----GG
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 150527 4 +    154973 AC----AA
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                163786 4 +    265003 at----gg
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  6545 2 -     19904 ------GG
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  150614 4 -    168139 AT----GA
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          24717 4 -    100666 AT----GA
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70772134 4 +  92629107 AT----GG
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75494188 4 +  98207768 AT----GG
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67560940 4 +  89017189 AT----GG
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74336914 4 +  97876770 AT----GG
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             15173 4 +     98495 AT----GG
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4428982 4 -  28371801 at----aa
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     94143 4 -    117718 AC----TG
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               971595 4 +   8389877 AT----GA
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5023015 4 +   6462685 at----ga
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3469099 4 -   3747815 AT----GA
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        14340 4 +     66751 AT----GA
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             7955 4 -      8794 AT----GG
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            240918 4 -    362372 AT----AG
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_1382660                              4127 4 +      5784 AT----GG
i Nasalis_larvatus.k141_1382660                         C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4490644 4 -  14209539 at----ga
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3955118 4 -   4490290 AC----AA
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  50854 4 +     94413 ac----ag
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_762468                             543 4 -      2755 AT----GG
i Nomascus_annamensis.k141_762468                       I 17 C 0
s Nomascus_concolor.k141_523891                              1189 4 +      1566 AT----GG
i Nomascus_concolor.k141_523891                         C 0 I 1
s Nomascus_gabriellae.k141_1400361                           1094 4 -      2203 AT----GG
i Nomascus_gabriellae.k141_1400361                      I 17 C 0
s Nomascus_siki_b.tarseq_44                          10087465 4 -  26722205 AT----GG
i Nomascus_siki_b.tarseq_44                         C 0 I 1
s Nomascus_siki_a.k141_421408                                  1008 4 +     16235 AT----GG
i Nomascus_siki_a.k141_421408                             I 31 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                38374 4 +   3668941 at----ga
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65572253 4 -  95554990 TG----AG
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_771591                            15663 4 +     16181 TG----AG
i Nycticebus_coucang.k141_771591                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65680441 4 +  89412551 TG----AG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            5000211 4 -  23139505 AG----GA
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3689632 4 +  10294119 AT----TG
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             685348 4 -   3126709 AT----GA
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1083975 2 +   1425656 ------GG
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         42051 2 +     78940 ------GG
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  130700 4 +    145789 AT----GG
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  43406 3 +     62360 AT----G-
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7228792 4 -   7562323 AC----AA
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              64496 4 -     66828 at----ag
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141884188 4 + 163896628 AG----GG
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      315512 4 -    505867 AT----GA
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        5489 4 -     53940 TG----GG
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18013458 4 -  38779656 TG----GG
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134082982 2 - 275406953 ------gg
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      84216 2 +    140051 ------GG
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                                53339738 4 + 205426864 AT----GG
i Pan_paniscus.CM003386.1                               C 0 I 6
s Pan_troglodytes.CM009241.2                             52442659 4 + 196562556 AT----GG
i Pan_troglodytes.CM009241.2                            C 0 I 6
s Panthera_onca.PanOnc_flattened_line_1615                  40234 4 +    295523 AT----GA
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3644049 4 +  18214204 AT----GA
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5033697 4 -   6340057 AT----GA
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1071853 2 -   1292953 ------GG
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               104807430 4 - 188283584 AT----GG
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_4279166                            1541 4 +     14039 AT----GG
i Papio_cynocephalus.k141_4279166                       C 0 C 0
s Papio_hamadryas.Contig2                                43125129 4 -  77290729 AT----GG
i Papio_hamadryas.Contig2                               C 0 C 0
s Papio_kindae.k141_3207681                                 22595 4 +     50820 AT----GG
i Papio_kindae.k141_3207681                             C 0 C 0
s Papio_papio.k141_979496                                   10613 4 +     14967 AT----GG
i Papio_papio.k141_979496                               I 17 C 0
s Papio_ursinus.k141_1345919                                 6478 4 -      7628 AT----GG
i Papio_ursinus.k141_1345919                            I 17 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    121716 4 -    135482 AT----GA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          11153 4 -     23713 CA----GG
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           12304 4 +     61070 CA----GG
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       2577 4 +     49596 GT----GG
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4955762 4 -   8017169 AT----GG
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              3259 4 +      8220 AC----AA
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Piliocolobus_badius.k141_512007                           29651 4 +     37672 AT----GG
i Piliocolobus_badius.k141_512007                       C 0 C 0
s Piliocolobus_gordonorum.k141_736355                       29568 4 +     67079 AT----GG
i Piliocolobus_gordonorum.k141_736355                   C 0 C 0
s Piliocolobus_kirkii.k141_451083                            4732 4 -     13367 AT----GG
i Piliocolobus_kirkii.k141_451083                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000342.1                3428333 4 -   4356645 AT----GG
i Piliocolobus_tephrosceles.PDMG02000342.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            99877 4 +    112873 AT----GA
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           9706 4 +     21690 AT----AA
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       26412 4 +     44506 AT----GG
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        26625 4 +     67491 AT----GG
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      16864 4 -     98129 AT----GG
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     26465 4 +    147771 AT----GG
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         3100 4 -     43940 AT----GG
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          7183 4 -     55515 AT----GG
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         26537 4 +    152463 AT----GG
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       4345 4 -    119457 AT----GG
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         16259 4 +    134592 AT----GG
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          26847 4 -     75465 AT----GG
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.CM009265.2                               104014426 4 - 193656255 AT----GG
i Pongo_abelii.CM009265.2                               C 0 I 6
s Pongo_pygmaeus.ctg127                                   6237388 4 -   6432864 AT----GG
i Pongo_pygmaeus.ctg127                                 C 0 I 6
s Presbytis_comata.k141_678168                              10858 4 +     11126 AT----GG
i Presbytis_comata.k141_678168                          C 0 C 0
s Presbytis_mitrata.k141_1767317                            10847 4 +     15869 AT----GG
i Presbytis_mitrata.k141_1767317                        C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                4273 4 -      9567 AC----AG
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6853088 4 +  12164890 TT----GT
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     21895 4 -     30946 NN----NN
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         8172 4 +     11805 TT----GG
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           47506 4 +     52369 TT----GG
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         39893 4 -     44753 TT----GG
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            21816 4 +     27322 TT----GG
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       21465 4 -     53241 TT----GG
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         43728 4 -     48185 TT----GG
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           38554 4 +     77221 AT----GG
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            6434 4 -     27784 AT----GA
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        250629 4 -    344369 AT----GA
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Puma_concolor.QAVW01000427.1                          131540346 4 - 161321710 at----ga
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_951151                              2884 4 -      8225 AT----GG
i Pygathrix_cinerea.k141_951151                         C 0 C 0
s Pygathrix_nigripes_b.ctg25                                14340720 4 -  15297009 AT----GG
i Pygathrix_nigripes_b.ctg25                               C 0 C 0
s Pygathrix_nigripes_a.k141_758202                             2901 4 -      8240 AT----GG
i Pygathrix_nigripes_a.k141_758202                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                20840 2 +     68503 ------GG
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 I 1
s Rattus_norvegicus.chr11                                13917981 4 +  90463843 at----gg
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1792943 4 +   2252614 AT----GG
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   152255183 4 - 206558726 AT----GG
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg241                            461991 4 +   1472273 AT----GG
i Rhinopithecus_strykeri.ctg241                         C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                      1251 2 -      4338 ------AG
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15676869 4 -  43202129 gt----GG
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        8782 4 +     34089 GT----GG
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              8722 4 -     60842 GT----GG
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              8816 4 +     67014 AT----GG
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              8793 4 +     60816 GT----GG
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 8730 4 -     76454 GT----GG
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17345515 4 -  30362882 AC----AG
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         24836 4 -     62485 AC----AG
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   39929 4 -    114521 AT----GG
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1743075                       45429 4 +     45790 AT----GG
i Semnopithecus_entellus.k141_1743075                   C 0 C 0
s Semnopithecus_hypoleucos.k141_2141024                      1202 4 -      8815 AT----GG
i Semnopithecus_hypoleucos.k141_2141024                 C 0 C 0
s Semnopithecus_johnii.k141_1300894                          1219 4 +     13764 AT----GG
i Semnopithecus_johnii.k141_1300894                     C 0 C 0
s Semnopithecus_priam.k141_368201                            9958 4 -     20692 AT----GG
i Semnopithecus_priam.k141_368201                       C 0 C 0
s Semnopithecus_schistaceus.k141_628310                     45503 4 -     53123 AT----GG
i Semnopithecus_schistaceus.k141_628310                 C 0 C 0
s Semnopithecus_vetulus.k141_748269                          4557 4 +     17284 AT----GG
i Semnopithecus_vetulus.k141_748269                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  105763 4 -    120886 AT----GG
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            23878 4 +    739146 TT----GG
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17774114 4 -  27805282 at----AA
i Sorex_araneus.JH798170.1                              I 13 C 0
s Spermophilus_dauricus.KZ294190.1                        2244377 4 +   2842873 at----gg
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             239416 4 -    276980 AT----GA
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            33531 4 +     62062 AT----GA
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189275321 4 + 218635234 AT----AG
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_190                     4045858 4 -  10168602 AT----GG
i Symphalangus_syndactylus.tarseq_190                   C 0 I 63
s Tadarida_brasiliensis.TadBra_scaffold_61492                2664 4 +     20549 AT----GA
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               17628 4 +     45698 AT----GG
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      811122 4 +   1148477 AT----GG
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  61764 4 +     99546 AT----GG
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       106203232 4 - 194193292 AT----GG
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                   719 4 -      3104 AT----GG
i Tolypeutes_matacus.TolMat_scaffold_475685             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  138428 4 -    259118 At----gc
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_672638                         4802 4 +     38635 AT----GG
i Trachypithecus_auratus.k141_672638                    C 0 C 0
s Trachypithecus_crepusculus.k141_863597                     4795 4 -     23436 AT----GG
i Trachypithecus_crepusculus.k141_863597                C 0 C 0
s Trachypithecus_cristatus.k141_968903                      32444 4 +     43409 AT----GG
i Trachypithecus_cristatus.k141_968903                  C 0 C 0
s Trachypithecus_francoisi.k141_1012484                       728 4 +      8809 AT----GG
i Trachypithecus_francoisi.k141_1012484                 C 0 C 0
s Trachypithecus_geei.k141_137495                           29957 4 -     42322 AT----GG
i Trachypithecus_geei.k141_137495                       C 0 C 0
s Trachypithecus_germaini.k141_240878                        4922 4 -     24955 AT----GG
i Trachypithecus_germaini.k141_240878                   C 0 C 0
s Trachypithecus_hatinhensis.k141_641377                     1093 4 +      1365 AT----GG
i Trachypithecus_hatinhensis.k141_641377                C 0 C 0
s Trachypithecus_laotum.k141_897381                         45497 4 -     53586 AT----GG
i Trachypithecus_laotum.k141_897381                     C 0 C 0
s Trachypithecus_leucocephalus.k141_352489                   1068 4 +      9423 AT----GG
i Trachypithecus_leucocephalus.k141_352489              C 0 C 0
s Trachypithecus_melamera.k141_950981                        2083 4 -      3512 AT----GG
i Trachypithecus_melamera.k141_950981                   C 0 C 0
s Trachypithecus_obscurus.k141_588024                        4807 4 +      4963 AT----GG
i Trachypithecus_obscurus.k141_588024                   C 0 C 0
s Trachypithecus_phayrei.ctg364                            232306 4 -   1198723 AT----GG
i Trachypithecus_phayrei.ctg364                         C 0 C 0
s Trachypithecus_pileatus.k141_532233                       29977 4 -     40754 AT----GG
i Trachypithecus_pileatus.k141_532233                   C 0 C 0
s Trichechus_manatus.JH594618.1                          16090161 4 +  31416278 AT----AG
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2798094 4 -   3938065 at----GA
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                   10026 4 +     13056 AT----GA
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69317521 4 -  96451834 AC----AA
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                     385 4 +    136657 AT----GT
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 C 0
s Ursus_maritimus.KK498671.1                              6521049 4 +  28682327 AT----GA
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  9731 4 -     20643 TT----GG
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             29266 4 -     33872 TT----GG
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1528549 4 -   2331223 AT----GG
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                144739 4 -    281493 AT----GA
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       131866 4 -    134049 AT----AA
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        220205 4 -    227762 AT----GA
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_256618                      451 4 -      2259 AT----GG
i Zapus_hudsonius.ZapHud_scaffold_256618                C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            2245 4 -     13665 AC----AA
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Petromus_typicus.PetTyp_scaffold_33007                    17492 0 -     36578 C
e Erinaceus_europaeus.JH835290.1                         11541587 40 +  16010500 I
e Tragulus_javanicus.TraJav_scaffold_14717                   9488 743 +     90398 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Dasypus_novemcinctus.JH568778.1                          185953 0 -   6883506 C
e Tarsius_wallacei.k141_48636                               64696 0 +     65473 C
e Tarsius_lariang.k141_609102                               31387 0 +     42269 C
e Rhinopithecus_bieti.k119_554384                            2917 0 -     17045 C
e Pithecia_vanzolinii.k141_831006                           15424 0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514 0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521 0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292 0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093 0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038 0 +     78826 C
e Pithecia_albicans.k141_991845                             45662 0 -     61926 C
e Cephalopachus_bancanus.k141_702587                        12545 0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530 0 +    345090 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               17856 2 +    209709 AG
s Acinonyx_jubatus.LLWD01000356.1                         2039824 2 +   3721120 aa
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    118160 1 -    189883 a-
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10663785 2 +  23371972 aa
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7100314 2 -  16596857 AA
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_141108                    713 2 -      7259 ag
i Allactaga_bullata.AllBul_scaffold_141108              C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   5731 2 -     60446 AA
i Allenopithecus_nigroviridis.k141_2469532              C 0 I 9
s Allochrocebus_lhoesti.k141_2676980                        46430 1 +     59001 -G
i Allochrocebus_lhoesti.k141_2676980                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         5386 2 +     38766 AA
i Allochrocebus_preussi.k141_1108977                    C 0 I 5
s Allochrocebus_solatus.k141_3029467                         1062 1 +      1260 -G
i Allochrocebus_solatus.k141_3029467                    C 0 C 0
s Alouatta_belzebul.k141_276091                              1325 2 +     19852 AG
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                3569 2 -     12443 AG
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                              868 2 +      5070 AG
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                  613 2 -      1641 AG
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          3352 2 -     24210 AG
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           29934 2 -     30219 AG
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_405616                              5770 2 +     16794 AG
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                             902 2 -      1470 AG
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             5047 2 -      9835 AG
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3525849 2 +   4113121 AG
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      392878 2 -    631301 AG
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             3282 2 +     55446 AG
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 66656 1 +     78111 -A
i Aotus_azarae.k141_3170768                             C 0 I 1
s Aotus_griseimembra.k141_3275623                            9604 1 +     22701 -A
i Aotus_griseimembra.k141_3275623                       C 0 I 1
s Aotus_nancymaae.KZ196176.1                              5753561 1 +   9889416 -A
i Aotus_nancymaae.KZ196176.1                            C 0 I 1
s Aotus_trivirgatus.k141_1740727                            10160 1 -    104377 -A
i Aotus_trivirgatus.k141_1740727                        C 0 I 1
s Aotus_vociferans.k141_718647                              10167 1 +     23246 -A
i Aotus_vociferans.k141_718647                          C 0 I 1
s Aplodontia_rufa.AprRuf_scaffold_101456                     2696 2 +     11424 AG
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        6784 2 +      9265 AG
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                11283 2 -     29036 AG
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9543455 2 +  39197703 AG
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             64729 2 +     85812 AG
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                15742 2 +     89302 AG
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             20243 2 -     58268 AG
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             68237 2 +    119057 AG
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              10206 2 -     25888 AG
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                11268 2 -     16375 AG
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               4884 2 +      6337 AG
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26384319 2 +  51448160 AG
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        9492 2 -     13118 AG
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   48313 2 -     72089 AG
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   302457 2 -   6870073 AG
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22956555 2 + 161108492 AG
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     418796 2 +    998990 AG
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22665209 2 + 158972876 AG
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               674963 2 +   1914593 AG
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               118105 2 -    171031 AG
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 17125 2 +    125063 AG
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                19172 2 -    216513 AG
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       11715 2 -    134917 AG
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3223445 2 -   8989139 AG
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           401146 2 -  15254737 AG
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2976883 2 +   6889770 AG
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11526663 2 +  39901454 AA
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   21637 2 +     87036 AA
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11273346 2 -  35597290 AA
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11096057 2 +  39895921 AA
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16462842 2 -  44759192 AA
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21333793 2 + 157394656 AG
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135712148 2 - 157403528 AG
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_529800                   525 2 -      2320 AG
i Capromys_pilorides.CapPil_scaffold_529800             C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               62299 2 +     67245 ag
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_1326                      294 2 -    202837 AA
i Castor_canadensis.CasCan_scaffold_1326                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   162971 2 -    276539 AG
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15789986 2 -  24422027 AG
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15801925 2 -  24440124 AG
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       180097 2 +    436027 AG
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18895831 1 -  29618158 -A
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                12481 1 -     26817 -A
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                16725 1 +     25043 -A
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4367890 2 +   7569818 AA
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         7647 2 -      9338 AA
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6559672 2 +   6739814 aA
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_1635769                       1974 1 +     20388 -G
i Cercocebus_chrysogaster.k141_1635769                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          6353 2 -     21101 AA
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         63663 2 -    107033 AA
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_1579766                        2853 1 -      4795 -G
i Cercopithecus_ascanius.k141_1579766                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          3691 2 +     45019 AA
i Cercopithecus_cephus.k141_3893260                     C 0 I 5
s Cercopithecus_diana.k141_2561715                           3967 2 +     15177 AA
i Cercopithecus_diana.k141_2561715                      C 0 I 5
s Cercopithecus_hamlyni.k141_955432                          2799 1 -      7769 -G
i Cercopithecus_hamlyni.k141_955432                     C 0 C 0
s Cercopithecus_lowei.k141_1996                              5196 1 -     17229 -G
i Cercopithecus_lowei.k141_1996                         C 0 C 0
s Cercopithecus_albogularis.ctg86                                350230 1 +  11364408 -G
i Cercopithecus_albogularis.ctg86                             C 0 C 0
s Cercopithecus_mona.ctg12                               46482270 2 +  46592721 AA
i Cercopithecus_mona.ctg12                              C 0 I 5
s Cercopithecus_neglectus.k141_2169300                        387 2 -     27215 AA
i Cercopithecus_neglectus.k141_2169300                  C 0 I 5
s Cercopithecus_nictitans.k141_1129315                       6587 2 +     35577 AA
i Cercopithecus_nictitans.k141_1129315                  C 0 I 5
s Cercopithecus_petaurista.k141_64532                        6381 2 -     25661 AA
i Cercopithecus_petaurista.k141_64532                   C 0 I 5
s Cercopithecus_pogonias.k141_1631406                         604 1 +     11509 -G
i Cercopithecus_pogonias.k141_1631406                   C 0 C 0
s Cercopithecus_roloway.k141_550462                         15234 1 +     34041 -G
i Cercopithecus_roloway.k141_550462                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           4883 2 -      6963 ag
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           63477 2 -     68416 AG
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                           12597 2 +     13308 AG
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             9767 2 -     18223 AG
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              1505 2 +    188999 AG
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           45804 2 +     57117 AG
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          50484 2 +     54541 AG
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15964677 2 +  43084221 AG
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         75284 2 +    196370 AG
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          19465 2 +     40510 AG
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15144107 2 -  15256731 AA
i Chlorocebus_aethiops.ctg22                            C 0 I 5
s Chlorocebus_pygerythrus.k141_596994                        4128 1 +     16635 -G
i Chlorocebus_pygerythrus.k141_596994                   C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                         13528658 1 + 101219884 -G
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                18994 2 -     21363 at
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           764298 2 +    964067 at
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_629495              2539 2 -      3120 AT
i Chrysochloris_asiatica.ChrAsi_scaffold_629495         C 0 C 0
s Colobus_angolensis.KN983490.1                            283796 1 +    886210 -G
i Colobus_angolensis.KN983490.1                         C 0 C 0
s Colobus_guereza.LG08                                   96946685 1 - 156195979 -G
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_688201                               348 1 +      1908 -G
i Colobus_polykomos.k141_688201                         C 0 C 0
s Condylura_cristata.JH655880.1                          60622459 2 +  78930452 AG
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         2823 2 -      5782 AG
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 282946 2 -    399297 AG
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53035304 2 +  72327488 AG
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              2398 2 -     22648 TG
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            57803 2 -     70449 AA
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  214564 2 -    956709 AA
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 34645 2 -     67205 AG
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                21167 2 +     26546 AG
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             62306 2 -    236241 AA
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16849428 2 +  31942871 AG
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80040938 2 -  96802777 AG
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18701511 2 -  18957592 AG
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 326546 2 +    993696 AA
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   7178 2 +    151128 AA
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   159932 2 +    228994 AG
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3660610 2 +   4240102 AG
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  2964 2 -     11986 AG
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                40883 2 -     73477 AG
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           23000204 2 -  44670279 ag
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1496529 2 +   1727528 AG
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7834469 2 +  15467074 ag
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        244111 1 -    369425 A-
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Enhydra_lutris.KZ291749.1                              85877777 2 +  99434291 AA
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4709264 2 +   6522550 GG
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5856639 2 -   7175178 ag
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13355139 2 +  41866177 ag
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          16629 2 +     92910 ag
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erythrocebus_patas.Contig8                             48781140 2 -  48907691 AA
i Erythrocebus_patas.Contig8                            C 0 I 5
s Eschrichtius_robustus.EscRob_flattened_line_685          319162 2 +    330699 AG
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             65619 2 +     89355 AG
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_59549                                673 2 +      1101 AG
i Eulemur_albifrons.k141_59549                          I 173 I 9
s Eulemur_collaris.k141_1015201                              2840 2 -      4292 AG
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            15977 2 +     36558 AG
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            12299 2 +     60246 AG
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                15784 2 +    109717 ag
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 3767 2 -     19505 AG
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                20442 2 +     27497 AC
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           22898 2 +     26808 AG
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                37630 2 +     46535 AG
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              20371 2 -     29447 AG
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129899244 2 - 159252932 AA
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129286219 2 - 158578461 AA
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 27318 2 +     52776 AA
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13896452 2 -  19261668 AA
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     215631 2 -    847004 AG
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           17992 2 -     43889 AG
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          15136 2 +     27357 AG
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               159883 2 +    324696 ac
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    186306 2 -    189561 AG
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           16772 2 -     18683 AG
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               9555 2 -     14630 AG
i Gorilla_beringei.k141_111300                          I 21 I 127
s Gorilla_gorilla.LT578340.1                            119656655 2 - 195582420 AG
i Gorilla_gorilla.LT578340.1                            I 21 I 130
s Graphiurus_murinus.GraMur_scaffold_4493                   80089 2 +    118900 AG
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         6366 2 +     10286 AG
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             4844 2 -     11661 AG
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                            10171 2 +     56096 AG
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        33420 2 -     42470 AG
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        50043 2 -     54384 ag
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              22943 2 +     53719 AA
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                33198 2 -     91191 AG
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2560944 2 +  31725842 AG
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               63171 2 +     73687 AA
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              150952 2 +    277961 AG
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      283349 2 -    477199 ag
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_7653                5905 2 +     86108 ag
i Hipposideros_galeritus.HipGal_scaffold_7653           C 0 I 5
s Hoolock_leuconedys.ctg649                                   109213 2 +    115816 AG
i Hoolock_leuconedys.ctg649                                I 21 I 5
s Hyaena_hyaena.HyaHya_flattened_line_20729                 23414 2 -     67322 AA
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           21552 2 -    119109 AG
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_1816750                             2041 2 +      3202 AG
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1633646                              2011 2 -      2102 AG
i Hylobates_agilis.k141_1633646                         C 0 C 0
s Hylobates_klossii.k141_468230                              3529 2 +      5464 AG
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14628876 2 -  25970782 AG
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            1428 2 +      4161 AG
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             37738 2 -     60944 AG
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     9847 2 +     22540 AG
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7130679 2 +  13083262 ag
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   1890 2 +      3484 AG
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              13150 2 +     17520 AG
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8577720 2 +  11848649 ag
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               27769 2 +     37189 AG
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          54324 2 -    147782 AG
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lemur_catta.scaffold_1                                258411718 2 - 285822530 AA
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        29027 2 +     39228 AG
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            58391 2 +     63517 AG
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        36771 2 -     38897 AG
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      2817 2 -     13103 AG
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3091754 2 -   3498232 AA
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    21175 2 +     22452 GC
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            140084 2 +   3060487 AG
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19252761 2 +  19376315 AA
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           15594 2 +     84689 AA
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3783333 2 +   6799190 AA
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20599093 1 -  62548349 A-
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11095513 2 +  39895028 AA
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_1195479                              4925 1 -     15622 -G
i Macaca_arctoides.k141_1195479                         C 0 C 0
s Macaca_assamensis.Contig48                             12918967 1 +  19716213 -G
i Macaca_assamensis.Contig48                            C 0 C 0
s Macaca_cyclopis.k119_883699                                3546 2 -     26467 AA
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           51417 2 +     63263 AA
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 3527 2 -     26361 AA
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_674993                                 4877 1 +     16544 -G
i Macaca_leonina.k141_674993                            C 0 C 0
s Macaca_maura.k141_188832                                   5257 1 -     30208 -G
i Macaca_maura.k141_188832                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            108306964 1 + 196197964 -G
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11450214 2 +  11645122 aA
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_2105412                                  4785 1 -     16799 -G
i Macaca_nigra.k141_2105412                             C 0 C 0
s Macaca_radiata.k141_339052                                 4861 1 -     65833 -G
i Macaca_radiata.k141_339052                            C 0 C 0
s Macaca_siberu.k141_901100                                  5227 1 +     15974 -G
i Macaca_siberu.k141_901100                             C 0 C 0
s Macaca_silenus.Contig12                                43845358 2 +  43892939 AA
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               21527 2 -     24607 AA
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               8897 2 -     27140 AA
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold126                      7795751 1 -  48617986 -G
i Mandrillus_leucophaeus.scaffold126                    C 0 C 0
s Mandrillus_sphinx.Contig18                              8135877 1 -  29546661 -G
i Mandrillus_sphinx.Contig18                            C 0 C 0
s Manis_javanica.JSZB01003966.1                            152470 2 +    252755 AG
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             40064 2 +     58827 AG
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36878548 2 +  64221397 ag
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       65906 2 -    234502 AG
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             6669 2 -     87323 AA
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 I 211
s Meriones_unguiculatus.MerUng_scaffold_9483                 1563 1 +    115071 A-
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1051832 2 -  26018355 AG
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    2741 2 -     12939 AG
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16514747 2 +  47401472 AG
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  41771 2 -     48017 ag
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               25259 2 -     32043 AG
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22824908 1 -  98408828 A-
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8213314 2 +  10048721 ag
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            37803 2 +     45743 gg
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         6479 2 +     29742 AA
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        17250 2 -    104932 AA
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     5431 2 -     12809 AG
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 150531 2 +    154973 AG
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                163790 2 +    265003 ag
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  6547 2 -     19904 AG
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  150618 2 -    168139 AA
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          24721 2 -    100666 GG
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70772138 1 +  92629107 A-
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75494192 1 +  98207768 A-
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67560944 1 +  89017189 A-
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74336918 1 +  97876770 A-
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             15177 2 +     98495 AG
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4428986 2 -  28371801 aa
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     94147 2 -    117718 AG
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               971599 2 +   8389877 GG
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5023019 2 +   6462685 gg
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3469103 2 -   3747815 GG
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        14344 2 +     66751 GG
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             7959 2 -      8794 AA
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            240922 2 -    362372 AG
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_1382660                              4131 1 +      5784 -G
i Nasalis_larvatus.k141_1382660                         C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4490648 2 -  14209539 aa
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3955122 2 -   4490290 AG
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  50858 2 +     94413 ag
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_762468                             547 2 -      2755 AG
i Nomascus_annamensis.k141_762468                       C 0 C 0
s Nomascus_concolor.k141_256540                              7159 2 -      8966 AG
i Nomascus_concolor.k141_256540                         I 21 I 9
s Nomascus_gabriellae.k141_1400361                           1098 2 -      2203 AG
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_453                             6410 2 +     12787 AG
i Nomascus_siki_b.tarseq_453                        I 21 I 9
s Nomascus_siki_a.k141_421408                                  1012 2 +     16235 AG
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                38378 2 +   3668941 aa
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65572257 2 -  95554990 AG
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_771591                            15667 2 +     16181 AG
i Nycticebus_coucang.k141_771591                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65680445 2 +  89412551 AG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            5000215 2 -  23139505 AC
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3689636 2 +  10294119 AA
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             685352 2 -   3126709 AA
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1083977 2 +   1425656 AG
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         42053 2 +     78940 AG
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  130704 1 +    145789 A-
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Orcinus_orca.KB316965.1                                 7228796 2 -   7562323 AG
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              64500 2 -     66828 ag
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141884192 2 + 163896628 GC
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      315516 2 -    505867 AA
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        5493 2 -     53940 AG
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18013462 2 -  38779656 AG
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134082984 2 - 275406953 ag
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      84218 2 +    140051 AG
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127578834 2 - 205426864 aG
i Pan_paniscus.CM003386.1                               I 21 C 0
s Pan_troglodytes.CM009241.2                            120155994 2 - 196562556 aG
i Pan_troglodytes.CM009241.2                            I 21 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  40238 2 +    295523 AA
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3644053 2 +  18214204 AA
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5033701 2 -   6340057 AA
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1071855 2 -   1292953 AG
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               104807434 1 - 188283584 -G
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_4279166                            1545 1 +     14039 -G
i Papio_cynocephalus.k141_4279166                       C 0 C 0
s Papio_hamadryas.Contig2                                43125133 1 -  77290729 -G
i Papio_hamadryas.Contig2                               C 0 C 0
s Papio_kindae.k141_3207681                                 22599 1 +     50820 -G
i Papio_kindae.k141_3207681                             C 0 C 0
s Papio_papio.k141_979496                                   10617 2 +     14967 AA
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 6482 2 -      7628 AA
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    121720 2 -    135482 AA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          11157 2 -     23713 AG
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           12308 2 +     61070 AG
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       2581 2 +     49596 AA
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4955766 2 -   8017169 AG
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              3263 2 +      8220 AG
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Piliocolobus_badius.k141_512007                           29655 1 +     37672 -G
i Piliocolobus_badius.k141_512007                       C 0 C 0
s Piliocolobus_gordonorum.k141_736355                       29572 1 +     67079 -G
i Piliocolobus_gordonorum.k141_736355                   C 0 C 0
s Piliocolobus_kirkii.k141_451083                            4736 1 -     13367 -G
i Piliocolobus_kirkii.k141_451083                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000342.1                3428337 1 -   4356645 -G
i Piliocolobus_tephrosceles.PDMG02000342.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            99881 2 +    112873 GG
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           9710 2 +     21690 AG
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       26416 2 +     44506 AG
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        26629 2 +     67491 AG
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      16868 2 -     98129 AG
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     26469 2 +    147771 AG
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         3104 2 -     43940 AG
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          7187 2 -     55515 AG
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         26541 2 +    152463 AG
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       4349 2 -    119457 AG
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         16263 2 +    134592 AG
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          26851 2 -     75465 AG
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              191465 2 -    373494 AG
i Pongo_abelii.NDHI03003816.1                           I 21 C 0
s Pongo_pygmaeus.ctg62                                   19812112 2 +  19899266 AG
i Pongo_pygmaeus.ctg62                                  I 21 C 0
s Presbytis_comata.k141_678168                              10862 1 +     11126 -G
i Presbytis_comata.k141_678168                          C 0 C 0
s Presbytis_mitrata.k141_1767317                            10851 1 +     15869 -G
i Presbytis_mitrata.k141_1767317                        C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                4277 2 -      9567 AG
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6853092 2 +  12164890 AG
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     21899 2 -     30946 NN
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         8176 2 +     11805 AG
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           47510 2 +     52369 AG
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         39897 2 -     44753 AG
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            21820 2 +     27322 AG
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       21469 2 -     53241 AG
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         43732 2 -     48185 AG
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           38558 1 +     77221 A-
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            6438 2 -     27784 AG
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        250633 2 -    344369 AA
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Puma_concolor.QAVW01000427.1                          131540350 2 - 161321710 aa
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_951151                              2888 1 -      8225 -G
i Pygathrix_cinerea.k141_951151                         C 0 C 0
s Pygathrix_nigripes_b.ctg25                                14340724 1 -  15297009 -G
i Pygathrix_nigripes_b.ctg25                               C 0 C 0
s Pygathrix_nigripes_a.k141_758202                             2905 1 -      8240 -G
i Pygathrix_nigripes_a.k141_758202                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                20843 1 +     68503 -G
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 1 C 0
s Rattus_norvegicus.chr11                                13917985 1 +  90463843 A-
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1792947 2 +   2252614 GG
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   152255187 1 - 206558726 -G
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg241                            461995 1 +   1472273 -G
i Rhinopithecus_strykeri.ctg241                         C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                      1253 2 -      4338 AG
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15676873 1 -  43202129 -A
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        8786 1 +     34089 -A
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              8726 1 -     60842 -A
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              8820 1 +     67014 -A
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              8797 1 +     60816 -A
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 8734 1 -     76454 -A
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17345519 1 -  30362882 -A
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         24840 1 -     62485 -A
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   39933 2 -    114521 AG
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1743075                       45433 1 +     45790 -G
i Semnopithecus_entellus.k141_1743075                   C 0 C 0
s Semnopithecus_hypoleucos.k141_2141024                      1206 1 -      8815 -G
i Semnopithecus_hypoleucos.k141_2141024                 C 0 C 0
s Semnopithecus_johnii.k141_1300894                          1223 1 +     13764 -G
i Semnopithecus_johnii.k141_1300894                     C 0 C 0
s Semnopithecus_priam.k141_368201                            9962 1 -     20692 -G
i Semnopithecus_priam.k141_368201                       C 0 C 0
s Semnopithecus_schistaceus.k141_628310                     45507 1 -     53123 -G
i Semnopithecus_schistaceus.k141_628310                 C 0 C 0
s Semnopithecus_vetulus.k141_748269                          4561 1 +     17284 -G
i Semnopithecus_vetulus.k141_748269                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  105767 1 -    120886 A-
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            23882 2 +    739146 AG
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17774118 2 -  27805282 AG
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2244381 2 +   2842873 ag
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             239420 2 -    276980 AA
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            33535 2 +     62062 AA
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189275325 2 + 218635234 AG
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        19135 2 -  13920577 AG
i Symphalangus_syndactylus.tarseq_24                    I 21 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                2668 2 +     20549 AG
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               17632 2 +     45698 AA
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      811126 2 +   1148477 AG
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  61768 2 +     99546 AG
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       106203236 1 - 194193292 -G
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                   723 2 -      3104 AG
i Tolypeutes_matacus.TolMat_scaffold_475685             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  138432 2 -    259118 ag
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_672638                         4806 1 +     38635 -G
i Trachypithecus_auratus.k141_672638                    C 0 C 0
s Trachypithecus_crepusculus.k141_863597                     4799 1 -     23436 -G
i Trachypithecus_crepusculus.k141_863597                C 0 C 0
s Trachypithecus_cristatus.k141_968903                      32448 1 +     43409 -G
i Trachypithecus_cristatus.k141_968903                  C 0 C 0
s Trachypithecus_francoisi.k141_1012484                       732 1 +      8809 -G
i Trachypithecus_francoisi.k141_1012484                 C 0 C 0
s Trachypithecus_geei.k141_137495                           29961 1 -     42322 -G
i Trachypithecus_geei.k141_137495                       C 0 C 0
s Trachypithecus_germaini.k141_240878                        4926 1 -     24955 -G
i Trachypithecus_germaini.k141_240878                   C 0 C 0
s Trachypithecus_hatinhensis.k141_641377                     1097 1 +      1365 -G
i Trachypithecus_hatinhensis.k141_641377                C 0 C 0
s Trachypithecus_laotum.k141_897381                         45501 1 -     53586 -G
i Trachypithecus_laotum.k141_897381                     C 0 C 0
s Trachypithecus_leucocephalus.k141_352489                   1072 1 +      9423 -G
i Trachypithecus_leucocephalus.k141_352489              C 0 C 0
s Trachypithecus_melamera.k141_950981                        2087 1 -      3512 -G
i Trachypithecus_melamera.k141_950981                   C 0 C 0
s Trachypithecus_obscurus.k141_588024                        4811 1 +      4963 -G
i Trachypithecus_obscurus.k141_588024                   C 0 C 0
s Trachypithecus_phayrei.ctg364                            232310 1 -   1198723 -G
i Trachypithecus_phayrei.ctg364                         C 0 C 0
s Trachypithecus_pileatus.k141_532233                       29981 1 -     40754 -G
i Trachypithecus_pileatus.k141_532233                   C 0 C 0
s Trichechus_manatus.JH594618.1                          16090165 2 +  31416278 AG
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2798098 2 -   3938065 AG
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                   10030 2 +     13056 AG
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69317525 2 -  96451834 AG
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                     389 2 +    136657 TG
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 C 0
s Ursus_maritimus.KK498671.1                              6521053 2 +  28682327 AA
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  9735 2 -     20643 AG
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             29270 2 -     33872 AG
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1528553 2 -   2331223 AG
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                144743 2 -    281493 AA
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       131870 2 -    134049 AG
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        220209 2 -    227762 AA
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_256618                      455 2 -      2259 AG
i Zapus_hudsonius.ZapHud_scaffold_256618                C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            2249 2 -     13665 AG
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Petromus_typicus.PetTyp_scaffold_33007                    17492 0 -     36578 C
e Erinaceus_europaeus.JH835290.1                         11541587 40 +  16010500 I
e Tragulus_javanicus.TraJav_scaffold_14717                   9488 743 +     90398 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Lasiurus_borealis.LasBor_scaffold_59542                    5872 0 +     26176 C
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Dasypus_novemcinctus.JH568778.1                          185953 0 -   6883506 C
e Tarsius_wallacei.k141_48636                               64696 0 +     65473 C
e Tarsius_lariang.k141_609102                               31387 0 +     42269 C
e Rhinopithecus_bieti.k119_554384                            2917 0 -     17045 C
e Pithecia_vanzolinii.k141_831006                           15424 0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514 0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521 0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292 0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093 0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038 0 +     78826 C
e Pithecia_albicans.k141_991845                             45662 0 -     61926 C
e Onychomys_torridus.OnyTor_scaffold_12578                  43409 0 +     62360 C
e Cephalopachus_bancanus.k141_702587                        12545 0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530 0 +    345090 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               17858  5 +    209709 AC------AT--------G
s Acinonyx_jubatus.LLWD01000356.1                         2039826  5 +   3721120 at------ac--------a
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    118161  5 -    189883 AG------TT--------G
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10663787  5 +  23371972 at------ac--------a
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7100316  5 -  16596857 AT------AC--------A
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_141108                    715  5 -      7259 ac------ac--------a
i Allactaga_bullata.AllBul_scaffold_141108              C 0 I 437
s Allenopithecus_nigroviridis.k141_2285818                  36742  5 -     52229 AT------AT--------G
i Allenopithecus_nigroviridis.k141_2285818              I 5 C 0
s Allochrocebus_lhoesti.k141_2676980                        46431  5 +     59001 AT------AT--------G
i Allochrocebus_lhoesti.k141_2676980                    C 0 C 0
s Allochrocebus_preussi.k141_1848067                         5685  5 +      6015 AT------AT--------G
i Allochrocebus_preussi.k141_1848067                    I 5 I 59
s Allochrocebus_solatus.k141_3029467                         1063  5 +      1260 AT------AT--------G
i Allochrocebus_solatus.k141_3029467                    C 0 C 0
s Alouatta_belzebul.k141_276091                              1327  5 +     19852 AC------AT--------g
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                3571  5 -     12443 AC------AT--------g
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                              870  5 +      5070 AC------AT--------g
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                  615  5 -      1641 AC------AT--------g
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          3354  5 -     24210 AC------AT--------g
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           29936  5 -     30219 AC------AT--------g
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_405616                              5772  5 +     16794 AC------AT--------g
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                             904  5 -      1470 AC------AT--------g
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             5049  5 -      9835 AC------AT--------g
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3525851  5 +   4113121 AT------AC--------A
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      392880  5 -    631301 AT------AC--------A
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             3284  5 +     55446 AT------AC--------A
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 66658  5 +     78111 AC------AT--------g
i Aotus_azarae.k141_3170768                             I 1 C 0
s Aotus_griseimembra.k141_3275623                            9606  5 +     22701 AC------AT--------G
i Aotus_griseimembra.k141_3275623                       I 1 C 0
s Aotus_nancymaae.KZ196176.1                              5753563  5 +   9889416 AC------AT--------G
i Aotus_nancymaae.KZ196176.1                            I 1 C 0
s Aotus_trivirgatus.k141_1740727                            10162  5 -    104377 AC------AT--------g
i Aotus_trivirgatus.k141_1740727                        I 1 C 0
s Aotus_vociferans.k141_718647                              10169  5 +     23246 AC------AT--------g
i Aotus_vociferans.k141_718647                          I 1 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     2698  5 +     11424 AC------AC--------A
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        6786  5 +      9265 AT------GT--------G
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                11285  5 -     29036 AT------AC--------A
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9543457  5 +  39197703 AC------AT--------g
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             64731  5 +     85812 AC------AT--------g
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                15744  5 +     89302 AC------AT--------g
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             20245  5 -     58268 AC------AT--------g
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             68239  5 +    119057 AC------AT--------g
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              10208  5 -     25888 AC------AT--------g
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                11270  5 -     16375 CT------At--------g
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               4886  5 +      6337 CT------At--------g
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26384321  5 +  51448160 AT------AT--------G
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        9494  5 -     13118 AT------AT--------G
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   48315  5 -     72089 AC------AC--------A
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   302459  5 -   6870073 AT------ac--------a
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22956557  5 + 161108492 At------ac--------a
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     418798  5 +    998990 At------ac--------a
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22665211  5 + 158972876 At------ac--------a
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               674965  5 +   1914593 AC------AC--------A
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               118107  5 -    171031 AC------AT--------g
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 17127  5 +    125063 AC------AT--------g
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                19174  5 -    216513 AC------AT--------g
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       11717  5 -    134917 AC------AT--------g
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3223447 13 -   8989139 AT------AGGAGTCCAGG
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           401148 13 -  15254737 AT------AGGAGTCCAGG
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2976885 13 +   6889770 AT------AGGAGTCCAGG
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11526665  5 +  39901454 GT------AC--------A
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   21639  5 +     87036 GT------AC--------A
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11273348  5 -  35597290 GT------AC--------A
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11096059  5 +  39895921 GT------AC--------A
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16462844  5 -  44759192 GT------AC--------A
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21333795  5 + 157394656 AT------AC--------A
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135712150  5 - 157403528 AT------AC--------A
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_529800                   527  5 -      2320 AT------AC--------A
i Capromys_pilorides.CapPil_scaffold_529800             C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               62301  5 +     67245 at------ac--------a
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_1326                      296  5 -    202837 AT------AC--------A
i Castor_canadensis.CasCan_scaffold_1326                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   162973  5 -    276539 AT------AT--------G
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15789988  5 -  24422027 AT------AC--------A
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15801927  5 -  24440124 AT------AC--------A
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       180099  5 +    436027 AT------AC--------A
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18895832  5 -  29618158 AC------AT--------g
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                12482  5 -     26817 AC------AT--------g
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                16726  5 +     25043 AC------AT--------g
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4367892  5 +   7569818 AT------AT--------G
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         7649  5 -      9338 AT------AT--------G
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6559674  5 +   6739814 AC------AT--------G
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_1635769                       1975  5 +     20388 AC------AT--------G
i Cercocebus_chrysogaster.k141_1635769                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          6355  5 -     21101 AC------AT--------g
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         63665  5 -    107033 AC------AT--------g
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_1579766                        2854  5 -      4795 AT------AT--------G
i Cercopithecus_ascanius.k141_1579766                   C 0 C 0
s Cercopithecus_cephus.k141_787308                          10737  5 -     21850 AT------AT--------G
i Cercopithecus_cephus.k141_787308                      I 5 I 59
s Cercopithecus_diana.k141_650374                            2026  5 -      8439 AT------AT--------G
i Cercopithecus_diana.k141_650374                       I 5 I 59
s Cercopithecus_hamlyni.k141_955432                          2800  5 -      7769 AT------AT--------G
i Cercopithecus_hamlyni.k141_955432                     C 0 C 0
s Cercopithecus_lowei.k141_1996                              5197  5 -     17229 AT------AT--------G
i Cercopithecus_lowei.k141_1996                         C 0 C 0
s Cercopithecus_albogularis.ctg86                                350231  5 +  11364408 AT------AT--------G
i Cercopithecus_albogularis.ctg86                             C 0 C 0
s Cercopithecus_mona.ctg21                               13251018  5 -  35162767 AT------AT--------G
i Cercopithecus_mona.ctg21                              I 5 I 59
s Cercopithecus_neglectus.k141_1258634                        662  5 -      1218 AT------AT--------G
i Cercopithecus_neglectus.k141_1258634                  I 5 I 59
s Cercopithecus_nictitans.k141_298052                       10735  5 +     24998 AT------AT--------G
i Cercopithecus_nictitans.k141_298052                   I 5 I 59
s Cercopithecus_petaurista.k141_2400098                      8559  5 -      8977 AT------AT--------G
i Cercopithecus_petaurista.k141_2400098                 n 5 I 59
s Cercopithecus_pogonias.k141_1631406                         605  5 +     11509 AT------AT--------G
i Cercopithecus_pogonias.k141_1631406                   C 0 C 0
s Cercopithecus_roloway.k141_550462                         15235  5 +     34041 AT------AT--------G
i Cercopithecus_roloway.k141_550462                     C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           4885  5 -      6963 ac------ag--------g
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           63479  5 -     68416 CT------At--------g
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                           12599  5 +     13308 CT------At--------g
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             9769  5 -     18223 GC------AT--------G
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              1507  5 +    188999 GC------AT--------G
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           45806  5 +     57117 GC------AT--------G
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          50486  5 +     54541 GC------AT--------G
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15964679  5 +  43084221 AT------AC--------A
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         75286  5 +    196370 AC------AT--------g
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          19467  5 +     40510 AC------AT--------g
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg55                              5018286  5 -  11124196 AT------AT--------G
i Chlorocebus_aethiops.ctg55                            I 5 I 59
s Chlorocebus_pygerythrus.k141_596994                        4129  5 +     16635 AT------AT--------G
i Chlorocebus_pygerythrus.k141_596994                   C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                         13528659  5 + 101219884 AT------AT--------G
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                18996  5 -     21363 gt------ag--------t
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           764300  5 +    964067 gt------ag--------t
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_629495              2541  5 -      3120 AT------AA--------G
i Chrysochloris_asiatica.ChrAsi_scaffold_629495         C 0 C 0
s Colobus_angolensis.KN983490.1                            283797  5 +    886210 AC------AT--------G
i Colobus_angolensis.KN983490.1                         C 0 C 0
s Colobus_guereza.LG08                                   96946686  5 - 156195979 AC------AT--------G
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_688201                               349  5 +      1908 AC------AT--------G
i Colobus_polykomos.k141_688201                         C 0 C 0
s Condylura_cristata.JH655880.1                          60622461  5 +  78930452 AT------AC--------A
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         2825  5 -      5782 AT------AC--------a
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 282948  5 -    399297 AG------TT--------G
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53035306  5 +  72327488 AG------CT--------G
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              2400  5 -     22648 AT------AC--------A
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            57805  5 -     70449 AT------AC--------a
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  214566  5 -    956709 AT------AC--------A
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 34647  5 -     67205 AT------AC--------A
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                21169  5 +     26546 AT------AC--------A
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             62308  5 -    236241 AT------AC--------A
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16849430  5 +  31942871 AT------AT--------G
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80040940  5 -  96802777 AT------AT--------G
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18701513  5 -  18957592 AT------AC--------A
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 326548  5 +    993696 AT------AT--------G
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   7180  5 +    151128 AT------AT--------G
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   159934  5 +    228994 AT------AT--------A
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3660612  5 +   4240102 AT------GC--------A
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  2966  5 -     11986 AT------GC--------A
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                40885  5 -     73477 AT------AT--------A
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           23000206  5 -  44670279 ag------gt--------g
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1496531  5 +   1727528 At------ac--------a
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7834471  5 +  15467074 aa------ac--------a
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        244112  4 -    369425 -G------TT--------G
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Enhydra_lutris.KZ291749.1                              85877779  5 +  99434291 AT------AC--------A
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4709266  5 +   6522550 AT------AC--------A
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5856641  5 -   7175178 at------at--------g
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13355141  5 +  41866177 at------at--------g
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          16631  5 +     92910 at------at--------g
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erythrocebus_patas.Contig45                            12732100  5 -  18870230 AT------AT--------G
i Erythrocebus_patas.Contig45                           I 5 I 59
s Eschrichtius_robustus.EscRob_flattened_line_685          319164  5 +    330699 AT------AT--------G
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             65621  5 +     89355 AT------AT--------G
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              9583  5 +     13586 CT------AT--------G
i Eulemur_albifrons.k141_715837                         I 2 C 0
s Eulemur_collaris.k141_1015201                              2842  5 -      4292 CT------AT--------G
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            15979  5 +     36558 CT------AT--------G
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            12301  5 +     60246 CT------At--------g
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                15786  5 +    109717 ct------at--------g
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 3769  5 -     19505 CT------AT--------G
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                20444  5 +     27497 CT------AT--------G
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           22900  5 +     26808 CT------AT--------G
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                37632  5 +     46535 CT------AT--------G
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              20373  5 -     29447 CT------AT--------G
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129899246  5 - 159252932 AT------AC--------a
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129286221  5 - 158578461 AT------AC--------a
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 27320  5 +     52776 AT------AC--------a
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13896454  5 -  19261668 CT------AT--------A
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     215633  5 -    847004 AT------GC--------A
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           17994  5 -     43889 AT------GC--------A
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          15138  5 +     27357 AC------AC--------A
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               159885  5 +    324696 aa------at--------a
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    186308  5 -    189561 AT------AC--------A
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           16774  5 -     18683 AT------AT--------A
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_2641970                               541  5 +      9263 AC------AT--------G
i Gorilla_beringei.k141_2641970                         I 1 C 0
s Gorilla_gorilla.LT578340.1                             52344634  5 + 195582420 ac------at--------g
i Gorilla_gorilla.LT578340.1                            I 1 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   80091  5 +    118900 AT------AT--------a
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         6368  5 +     10286 CT------At--------g
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             4846  5 -     11661 CT------At--------g
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                            10173  5 +     56096 CT------At--------g
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        33422  5 -     42470 CT------At--------g
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        50045  5 -     54384 ct------at--------g
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              22945  5 +     53719 AT------AC--------a
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                33200  5 -     91191 AT------AC--------A
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2560946  5 +  31725842 AT------AC--------A
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               63173  5 +     73687 AC------AT--------G
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              150954  5 +    277961 AT------AT--------G
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      283351 11 -    477199 agagatatat--------g
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959               1121  9 +     26078 AG--AGATAT--------G
i Hipposideros_galeritus.HipGal_scaffold_52959          I 6 I 49
s Hoolock_leuconedys.ctg83                                  28459987  5 -  32676794 AT------AT--------A
i Hoolock_leuconedys.ctg83                                 I 1 I 51
s Hyaena_hyaena.HyaHya_flattened_line_20729                 23416  5 -     67322 AT------AC--------A
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           21554  5 -    119109 AC------AT--------A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_1816750                             2043  5 +      3202 AC------AT--------G
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1633646                              2013  5 -      2102 AC------AT--------G
i Hylobates_agilis.k141_1633646                         C 0 C 0
s Hylobates_klossii.k141_468230                              3531  5 +      5464 AC------AT--------G
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14628878  5 -  25970782 AC------AT--------G
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            1430  5 +      4161 AC------AT--------G
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             37740  5 -     60944 AC------AT--------G
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     9849  5 +     22540 AT------AC--------A
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7130681  5 +  13083262 aa------ac--------a
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   1892  4 +      3484 C-------At--------g
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              13152  5 +     17520 AT------AT--------G
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8577722  5 +  11848649 ac------ac--------a
i Jaculus_jaculus.JH725517.1                            C 0 I 445
s Kogia_breviceps.KogBre_flattened_line_35920               27771  5 +     37189 AT------AT--------G
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          54326  5 -    147782 AC------AT--------G
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lemur_catta.scaffold_1                                258411720  5 - 285822530 CT------At--------g
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        29029  5 +     39228 CT------AT--------G
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            58393  5 +     63517 CT------AT--------G
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        36773  5 -     38897 CT------AT--------G
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      2819  5 -     13103 CT------AT--------G
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3091756  5 -   3498232 AT------AC--------a
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    21177  5 +     22452 AT------AT--------T
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            140086  5 +   3060487 AT------AT--------G
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19252763  5 +  19376315 AC------AT--------G
i Lophocebus_aterrimus.ctg55                            C 0 I 4
s Loris_lydekkerianus.k141_550999                           15596  5 +     84689 AT------GT--------A
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3783335  5 +   6799190 AT------GT--------A
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20599094  4 -  62548349 -C------GT--------g
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11095515  5 +  39895028 GT------AC--------A
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_1195479                              4926  5 -     15622 AC------AT--------G
i Macaca_arctoides.k141_1195479                         C 0 C 0
s Macaca_assamensis.Contig48                             12918968  5 +  19716213 AC------AT--------G
i Macaca_assamensis.Contig48                            C 0 C 0
s Macaca_cyclopis.k119_883699                                3548  5 -     26467 AC------AT--------G
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           51419  5 +     63263 AC------AT--------G
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 3529  5 -     26361 AC------AT--------G
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_674993                                 4878  5 +     16544 AC------AT--------G
i Macaca_leonina.k141_674993                            C 0 C 0
s Macaca_maura.k141_188832                                   5258  5 -     30208 AC------AT--------G
i Macaca_maura.k141_188832                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            108306965  5 + 196197964 AC------AT--------G
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11450216  5 +  11645122 AC------AT--------G
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_2105412                                  4786  5 -     16799 AC------AT--------G
i Macaca_nigra.k141_2105412                             C 0 C 0
s Macaca_radiata.k141_339052                                 4862  5 -     65833 AC------AT--------G
i Macaca_radiata.k141_339052                            C 0 C 0
s Macaca_siberu.k141_901100                                  5228  5 +     15974 AC------AT--------G
i Macaca_siberu.k141_901100                             C 0 C 0
s Macaca_silenus.Contig12                                43845360  5 +  43892939 AC------AT--------G
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               21529  5 -     24607 AC------AT--------G
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               8899  5 -     27140 AC------AT--------G
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold126                      7795752  5 -  48617986 AC------AT--------G
i Mandrillus_leucophaeus.scaffold126                    C 0 C 0
s Mandrillus_sphinx.Contig18                              8135878  5 -  29546661 AC------AT--------G
i Mandrillus_sphinx.Contig18                            C 0 C 0
s Manis_javanica.JSZB01003966.1                            152472  5 +    252755 AT------AC--------T
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             40066  5 +     58827 AT------AC--------T
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36878550  5 +  64221397 ac------ac--------a
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       65908  5 -    234502 AC------AC--------A
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             6882  5 -     87323 AT------AC--------A
i Mellivora_capensis.MelCap_flattened_line_15433        I 211 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 1564  5 +    115071 AG------TG--------G
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1051834  5 -  26018355 AG------CT--------G
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    2743  5 -     12939 AT------AT--------G
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16514749  5 +  47401472 CT------AT--------G
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  41773  5 -     48017 ag------ac--------a
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               25261  5 -     32043 AT------AT--------A
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22824909  4 -  98408828 -G------TT--------G
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8213316  5 +  10048721 at------gc--------a
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            37805  5 +     45743 at------gc--------a
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         6481  5 +     29742 AC------AT--------g
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        17252  5 -    104932 AT------AC--------a
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     5433  5 -     12809 CT------At--------g
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 150533  5 +    154973 AT------AG--------G
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                163792  5 +    265003 ac------ac--------a
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  6549  5 -     19904 AT------AC--------A
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  150620  5 -    168139 AT------AC--------a
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          24723  5 -    100666 AT------AC--------A
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70772139  5 +  92629107 TG------TT--------G
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75494193  5 +  98207768 TG------TT--------G
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67560945  5 +  89017189 TG------TT--------G
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74336919  5 +  97876770 TG------TT--------G
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             15179  5 +     98495 AT------AT--------G
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4428988  5 -  28371801 at------ac--------a
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     94149  5 -    117718 AT------AC--------A
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               971601  5 +   8389877 AT------AC--------a
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5023021  5 +   6462685 ct------gc--------a
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3469105  5 -   3747815 AT------AC--------a
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        14346  5 +     66751 AT------AC--------a
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             7961  5 -      8794 GT------AG--------G
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            240924  5 -    362372 AT------AC--------A
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_1382660                              4132  5 +      5784 AC------AT--------G
i Nasalis_larvatus.k141_1382660                         C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4490650  5 -  14209539 at------ac--------a
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3955124  5 -   4490290 AT------AT--------g
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  50860  5 +     94413 at------gc--------a
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_762468                             549  5 -      2755 AC------AT--------g
i Nomascus_annamensis.k141_762468                       C 0 C 0
s Nomascus_concolor.k141_523891                              1194  5 +      1566 AT------AT--------A
i Nomascus_concolor.k141_523891                         I 1 C 0
s Nomascus_gabriellae.k141_1400361                           1100  5 -      2203 AC------AT--------g
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_44                          10087470  5 -  26722205 AT------AT--------A
i Nomascus_siki_b.tarseq_44                         I 1 C 0
s Nomascus_siki_a.k141_421408                                  1014  5 +     16235 AC------AT--------g
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                38380  5 +   3668941 at------ac--------a
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65572259  5 -  95554990 AT------GT--------A
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_771591                            15669  5 +     16181 AT------GT--------A
i Nycticebus_coucang.k141_771591                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65680447  5 +  89412551 AT------GT--------A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            5000217  5 -  23139505 AC------AA--------T
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3689638  5 +  10294119 AT------AC--------A
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             685354  5 -   3126709 AT------AC--------a
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1083979  5 +   1425656 at------at--------a
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         42055  5 +     78940 AT------AC--------A
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  130705  4 +    145789 -G------TT--------G
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Orcinus_orca.KB316965.1                                 7228798  5 -   7562323 AT------AT--------G
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              64502  5 -     66828 at------aa--------a
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141884194  5 + 163896628 AT------AT--------T
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      315518  5 -    505867 AT------AC--------A
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        5495  5 -     53940 AT------GC--------A
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18013464  5 -  38779656 AT------GC--------A
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134082986  5 - 275406953 at------ac--------a
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      84220  5 +    140051 AT------AC--------A
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127578836  5 - 205426864 AC------AT--------G
i Pan_paniscus.CM003386.1                               C 0 I 4
s Pan_troglodytes.CM009241.2                            120155996  5 - 196562556 AC------AT--------G
i Pan_troglodytes.CM009241.2                            C 0 I 4
s Panthera_onca.PanOnc_flattened_line_1615                  40240  5 +    295523 AT------AC--------a
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3644055  5 +  18214204 AT------AC--------a
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5033703  5 -   6340057 AT------AC--------a
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1071857  5 -   1292953 AT------AC--------A
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               104807435  5 - 188283584 AC------AT--------G
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_4279166                            1546  5 +     14039 AC------AT--------G
i Papio_cynocephalus.k141_4279166                       C 0 C 0
s Papio_hamadryas.Contig2                                43125134  5 -  77290729 AC------AT--------G
i Papio_hamadryas.Contig2                               C 0 C 0
s Papio_kindae.k141_3207681                                 22600  5 +     50820 AC------AT--------G
i Papio_kindae.k141_3207681                             C 0 C 0
s Papio_papio.k141_979496                                   10619  5 +     14967 AC------AT--------G
i Papio_papio.k141_979496                               C 0 I 4
s Papio_ursinus.k141_1345919                                 6484  5 -      7628 AC------AT--------G
i Papio_ursinus.k141_1345919                            C 0 I 4
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    121722  5 -    135482 AT------AC--------A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          11159  5 -     23713 AT------GT--------A
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           12310  5 +     61070 AT------GT--------A
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       2583  5 +     49596 AT------AC--------A
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4955768  5 -   8017169 AG------CT--------G
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              3265  5 +      8220 AT------AT--------G
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Piliocolobus_badius.k141_512007                           29656  5 +     37672 AC------AT--------G
i Piliocolobus_badius.k141_512007                       C 0 C 0
s Piliocolobus_gordonorum.k141_736355                       29573  5 +     67079 AC------AT--------G
i Piliocolobus_gordonorum.k141_736355                   C 0 C 0
s Piliocolobus_kirkii.k141_451083                            4737  5 -     13367 AC------AT--------G
i Piliocolobus_kirkii.k141_451083                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000342.1                3428338  5 -   4356645 AC------AT--------G
i Piliocolobus_tephrosceles.PDMG02000342.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            99883  5 +    112873 AT------AC--------A
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           9712  5 +     21690 AT------AT--------G
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       26418  5 +     44506 GT------AT--------G
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        26631  5 +     67491 GT------AT--------G
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      16870  5 -     98129 GT------AT--------G
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     26471  5 +    147771 GT------AT--------G
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         3106  5 -     43940 GT------AT--------G
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          7189  5 -     55515 GT------AT--------G
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         26543  5 +    152463 GT------AT--------A
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       4351  5 -    119457 GT------AT--------G
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         16265  5 +    134592 GT------AT--------G
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          26853  5 -     75465 GT------AT--------A
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              191467  5 -    373494 AC------AT--------G
i Pongo_abelii.NDHI03003816.1                           C 0 I 4
s Pongo_pygmaeus.ctg62                                   19812114  5 +  19899266 AC------AT--------g
i Pongo_pygmaeus.ctg62                                  C 0 I 4
s Presbytis_comata.k141_678168                              10863  5 +     11126 AC------AT--------G
i Presbytis_comata.k141_678168                          C 0 C 0
s Presbytis_mitrata.k141_1767317                            10852  5 +     15869 AC------AT--------G
i Presbytis_mitrata.k141_1767317                        C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                4279  5 -      9567 AC------AT--------G
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6853094  5 +  12164890 CT------AT--------G
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     21901  5 -     30946 NN------NN--------N
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         8178  5 +     11805 CT------AT--------G
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           47512  5 +     52369 CT------AT--------G
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         39899  5 -     44753 CT------At--------g
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            21822  5 +     27322 CT------AT--------G
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       21471  5 -     53241 CT------AT--------G
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         43734  5 -     48185 CT------AT--------G
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           38559  5 +     77221 AG------TG--------G
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            6440  5 -     27784 AT------AC--------a
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        250635  5 -    344369 AT------AC--------A
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Puma_concolor.QAVW01000427.1                          131540352  5 - 161321710 at------ac--------a
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_951151                              2889  5 -      8225 AC------AT--------G
i Pygathrix_cinerea.k141_951151                         C 0 C 0
s Pygathrix_nigripes_b.ctg25                                14340725  5 -  15297009 AC------AT--------G
i Pygathrix_nigripes_b.ctg25                               C 0 C 0
s Pygathrix_nigripes_a.k141_758202                             2906  5 -      8240 AC------AT--------G
i Pygathrix_nigripes_a.k141_758202                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                20844  5 +     68503 AT------AC--------A
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13917986  5 +  90463843 TG------TT--------G
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1792949  2 +   2252614 AT-----------------
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   152255188  5 - 206558726 AC------AT--------G
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg241                            461996  5 +   1472273 AC------AT--------G
i Rhinopithecus_strykeri.ctg241                         C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                      1255  5 -      4338 AT------AC--------A
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15676874  5 -  43202129 AC------AT--------G
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        8787  5 +     34089 AC------AT--------G
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              8727  5 -     60842 AC------AT--------G
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              8821  5 +     67014 AC------AT--------G
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              8798  5 +     60816 AC------AT--------G
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 8735  5 -     76454 AC------AT--------G
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17345520  5 -  30362882 AC------AT--------g
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         24841  5 -     62485 AC------AT--------g
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   39935  5 -    114521 AT------AC--------A
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1743075                       45434  5 +     45790 AC------AT--------G
i Semnopithecus_entellus.k141_1743075                   C 0 C 0
s Semnopithecus_hypoleucos.k141_2141024                      1207  5 -      8815 AC------AT--------G
i Semnopithecus_hypoleucos.k141_2141024                 C 0 C 0
s Semnopithecus_johnii.k141_1300894                          1224  5 +     13764 AC------AT--------G
i Semnopithecus_johnii.k141_1300894                     C 0 C 0
s Semnopithecus_priam.k141_368201                            9963  5 -     20692 AC------AT--------G
i Semnopithecus_priam.k141_368201                       C 0 C 0
s Semnopithecus_schistaceus.k141_628310                     45508  5 -     53123 AC------AT--------G
i Semnopithecus_schistaceus.k141_628310                 C 0 C 0
s Semnopithecus_vetulus.k141_748269                          4562  5 +     17284 AC------AT--------G
i Semnopithecus_vetulus.k141_748269                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  105768  5 -    120886 AG------CT--------G
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            23884  5 +    739146 AT------AC--------A
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17774120  5 -  27805282 AT------AC--------A
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2244383  5 +   2842873 aa------ac--------a
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             239422  5 -    276980 AT------AC--------A
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            33537  5 +     62062 AT------AC--------a
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189275327  5 + 218635234 AT------AC--------A
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        19137  5 -  13920577 AT------AT--------G
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                2670  5 +     20549 AT------AC--------a
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               17634  5 +     45698 GT------AG--------G
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      811128  5 +   1148477 AT------AC--------A
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  61770  5 +     99546 AT------AC--------A
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       106203237  5 - 194193292 AC------AT--------G
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                   725  5 -      3104 AT------Ag--------g
i Tolypeutes_matacus.TolMat_scaffold_475685             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  138434  5 -    259118 at------ac--------a
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_672638                         4807  5 +     38635 AC------AT--------G
i Trachypithecus_auratus.k141_672638                    C 0 C 0
s Trachypithecus_crepusculus.k141_863597                     4800  5 -     23436 AC------AT--------G
i Trachypithecus_crepusculus.k141_863597                C 0 C 0
s Trachypithecus_cristatus.k141_968903                      32449  5 +     43409 AC------AT--------G
i Trachypithecus_cristatus.k141_968903                  C 0 C 0
s Trachypithecus_francoisi.k141_1012484                       733  5 +      8809 AC------AT--------G
i Trachypithecus_francoisi.k141_1012484                 C 0 C 0
s Trachypithecus_geei.k141_137495                           29962  5 -     42322 AC------AT--------G
i Trachypithecus_geei.k141_137495                       C 0 C 0
s Trachypithecus_germaini.k141_240878                        4927  5 -     24955 AC------AT--------G
i Trachypithecus_germaini.k141_240878                   C 0 C 0
s Trachypithecus_hatinhensis.k141_641377                     1098  5 +      1365 AC------AT--------G
i Trachypithecus_hatinhensis.k141_641377                C 0 C 0
s Trachypithecus_laotum.k141_897381                         45502  5 -     53586 AC------AT--------G
i Trachypithecus_laotum.k141_897381                     C 0 C 0
s Trachypithecus_leucocephalus.k141_352489                   1073  5 +      9423 AC------AT--------G
i Trachypithecus_leucocephalus.k141_352489              C 0 C 0
s Trachypithecus_melamera.k141_950981                        2088  5 -      3512 AC------AT--------G
i Trachypithecus_melamera.k141_950981                   C 0 C 0
s Trachypithecus_obscurus.k141_588024                        4812  5 +      4963 AC------AT--------G
i Trachypithecus_obscurus.k141_588024                   C 0 C 0
s Trachypithecus_phayrei.ctg364                            232311  5 -   1198723 AC------AT--------G
i Trachypithecus_phayrei.ctg364                         C 0 C 0
s Trachypithecus_pileatus.k141_532233                       29982  5 -     40754 AC------AT--------G
i Trachypithecus_pileatus.k141_532233                   C 0 C 0
s Trichechus_manatus.JH594618.1                          16090167  5 +  31416278 AT------AT--------g
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2798100  5 -   3938065 AT------AC--------A
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                   10032  5 +     13056 AT------AC--------G
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69317527  5 -  96451834 AT------AT--------G
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                     391  5 +    136657 AT------AC--------A
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 C 0
s Ursus_maritimus.KK498671.1                              6521055  5 +  28682327 AT------AC--------a
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  9737  5 -     20643 CT------AT--------G
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             29272  5 -     33872 CT------AT--------G
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1528555 13 -   2331223 AT------AGGAGTCCAGG
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                144745  5 -    281493 AT------AC--------A
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       131872  5 -    134049 AG------AG--------G
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        220211  5 -    227762 AT------AC--------a
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_256618                      457  5 -      2259 AC------AC--------A
i Zapus_hudsonius.ZapHud_scaffold_256618                C 0 I 405
s Ziphius_cavirostris.ZipCav_flattened_line_60625            2251  5 -     13665 AT------AT--------G
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Petromus_typicus.PetTyp_scaffold_33007                    17492  0 -     36578 C
e Erinaceus_europaeus.JH835290.1                         11541587 40 +  16010500 I
e Tragulus_javanicus.TraJav_scaffold_14717                   9488 743 +     90398 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Lasiurus_borealis.LasBor_scaffold_59542                    5872  0 +     26176 C
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Dasypus_novemcinctus.JH568778.1                          185953  0 -   6883506 C
e Tarsius_wallacei.k141_48636                               64696  0 +     65473 C
e Tarsius_lariang.k141_609102                               31387  0 +     42269 C
e Rhinopithecus_bieti.k119_554384                            2917  0 -     17045 C
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Onychomys_torridus.OnyTor_scaffold_12578                  43409  0 +     62360 C
e Cephalopachus_bancanus.k141_702587                        12545  0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530  0 +    345090 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               17863 4 +    209709 A---AA-G
s Acinonyx_jubatus.LLWD01000356.1                         2039831 4 +   3721120 a---aa-g
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    118166 4 -    189883 G---AA-G
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10663792 4 +  23371972 a---aa-g
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7100321 4 -  16596857 A---AA-G
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_141108                   1157 4 -      7259 A---AA-G
i Allactaga_bullata.AllBul_scaffold_141108              I 437 C 0
s Allenopithecus_nigroviridis.k141_2285818                  36747 4 -     52229 A---AA-G
i Allenopithecus_nigroviridis.k141_2285818              C 0 I 55
s Allochrocebus_lhoesti.k141_2676980                        46436 4 +     59001 A---AA-G
i Allochrocebus_lhoesti.k141_2676980                    C 0 I 55
s Allochrocebus_preussi.k141_1108977                         5393 4 +     38766 a---aa-g
i Allochrocebus_preussi.k141_1108977                    I 5 C 0
s Allochrocebus_solatus.k141_3029467                         1068 4 +      1260 A---AA-G
i Allochrocebus_solatus.k141_3029467                    C 0 I 55
s Alouatta_belzebul.k141_276091                              1332 4 +     19852 a---aa-g
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                3576 4 -     12443 a---aa-g
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                              875 4 +      5070 a---aa-g
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                  620 4 -      1641 a---aa-g
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          3359 4 -     24210 a---aa-g
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           29941 4 -     30219 a---aa-g
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_405616                              5777 4 +     16794 a---aa-g
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                             909 4 -      1470 a---aa-g
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             5054 4 -      9835 a---aa-g
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3525856 3 +   4113121 A---AA--
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      392885 4 -    631301 A---AA-G
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             3289 3 +     55446 A---AA--
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 66663 4 +     78111 a---aa-g
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            9611 4 +     22701 A---AA-G
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5753568 4 +   9889416 A---AA-G
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                            10167 4 -    104377 a---aa-g
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                              10174 4 +     23246 a---aa-g
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     2703 4 +     11424 A---AA-G
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        6791 4 +      9265 A---AA-G
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                11290 4 -     29036 A---AA-G
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9543462 4 +  39197703 a---aa-g
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             64736 4 +     85812 a---aa-g
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                15749 4 +     89302 a---aa-g
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             20250 4 -     58268 a---aa-g
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             68244 4 +    119057 a---aa-g
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              10213 4 -     25888 a---aa-g
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                11275 4 -     16375 a---aa-g
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               4891 4 +      6337 a---aa-g
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26384326 4 +  51448160 a---aa-g
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        9499 4 -     13118 a---aa-g
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   48320 3 -     72089 A---AA--
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   302464 3 -   6870073 a---aa--
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22956562 3 + 161108492 a---aa--
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     418803 3 +    998990 a---aa--
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22665216 3 + 158972876 a---aa--
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               674970 3 +   1914593 A---AA--
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               118112 4 -    171031 a---aa-g
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 17132 4 +    125063 a---aa-g
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                19179 4 -    216513 a---aa-g
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       11722 4 -    134917 a---aa-g
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3223460 4 -   8989139 A---AA-T
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           401161 4 -  15254737 A---AA-T
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2976898 4 +   6889770 A---AA-T
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11526670 5 +  39901454 A---AAAG
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   21644 5 +     87036 A---AAAG
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11273353 5 -  35597290 A---AAAG
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11096064 5 +  39895921 A---AAAG
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16462849 5 -  44759192 A---AAAG
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21333800 3 + 157394656 A---AA--
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135712155 3 - 157403528 A---AA--
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_529800                   532 4 -      2320 A---CA-G
i Capromys_pilorides.CapPil_scaffold_529800             C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               62306 4 +     67245 a---aa-g
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_1326                      301 4 -    202837 A---CA-A
i Castor_canadensis.CasCan_scaffold_1326                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   162978 4 -    276539 A---AA-G
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 I 12
s Cavia_aperea.AVPZ01000278.1                            15789993 4 -  24422027 A---TG-C
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15801932 4 -  24440124 A---TG-C
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       180104 4 +    436027 A---TG-C
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18895837 4 -  29618158 a---aa-g
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                12487 4 -     26817 a---aa-g
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                16731 4 +     25043 a---aa-g
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4367897 4 +   7569818 a---aa-g
i Ceratotherium_simum.JH767818.1                        C 0 I 11
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         7654 4 -      9338 A---AA-G
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 I 11
s Cercocebus_atys.KQ010443.1                              6559679 4 +   6739814 A---AA-G
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_1635769                       1980 4 +     20388 A---AA-G
i Cercocebus_chrysogaster.k141_1635769                  C 0 I 55
s Cercocebus_lunulatus.k141_4634644                          6360 4 -     21101 a---aa-g
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         63670 4 -    107033 a---aa-g
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_1579766                        2859 4 -      4795 A---AA-G
i Cercopithecus_ascanius.k141_1579766                   C 0 I 55
s Cercopithecus_cephus.k141_3893260                          3698 4 +     45019 a---aa-g
i Cercopithecus_cephus.k141_3893260                     I 5 C 0
s Cercopithecus_diana.k141_2561715                           3974 4 +     15177 a---aa-g
i Cercopithecus_diana.k141_2561715                      I 5 C 0
s Cercopithecus_hamlyni.k141_955432                          2805 4 -      7769 A---AA-G
i Cercopithecus_hamlyni.k141_955432                     C 0 I 55
s Cercopithecus_lowei.k141_1996                              5202 4 -     17229 A---AA-G
i Cercopithecus_lowei.k141_1996                         C 0 I 55
s Cercopithecus_albogularis.ctg86                                350236 4 +  11364408 A---AA-G
i Cercopithecus_albogularis.ctg86                             C 0 I 55
s Cercopithecus_mona.ctg12                               46482277 4 +  46592721 a---aa-g
i Cercopithecus_mona.ctg12                              I 5 C 0
s Cercopithecus_neglectus.k141_2169300                        394 4 -     27215 a---aa-g
i Cercopithecus_neglectus.k141_2169300                  I 5 C 0
s Cercopithecus_nictitans.k141_1129315                       6594 4 +     35577 a---aa-g
i Cercopithecus_nictitans.k141_1129315                  I 5 C 0
s Cercopithecus_petaurista.k141_64532                        6388 4 -     25661 a---aa-g
i Cercopithecus_petaurista.k141_64532                   I 5 C 0
s Cercopithecus_pogonias.k141_1631406                         610 4 +     11509 A---AA-G
i Cercopithecus_pogonias.k141_1631406                   C 0 I 55
s Cercopithecus_roloway.k141_550462                         15240 4 +     34041 A---AA-G
i Cercopithecus_roloway.k141_550462                     C 0 I 55
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           4890 4 -      6963 a---aa-g
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           63484 4 -     68416 a---aa-g
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                           12604 4 +     13308 a---aa-g
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             9774 4 -     18223 A---AA-G
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              1512 4 +    188999 A---AA-G
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           45811 4 +     57117 A---AA-G
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          50491 4 +     54541 A---AA-G
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15964684 4 +  43084221 A---CG-G
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         75291 4 +    196370 a---aa-g
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          19472 4 +     40510 a---aa-g
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15144114 4 -  15256731 a---aa-g
i Chlorocebus_aethiops.ctg22                            I 5 C 0
s Chlorocebus_pygerythrus.k141_596994                        4134 4 +     16635 A---AA-G
i Chlorocebus_pygerythrus.k141_596994                   C 0 I 55
s Chlorocebus_sabaeus.CM001963.2                         13528664 4 + 101219884 A---AA-G
i Chlorocebus_sabaeus.CM001963.2                        C 0 N 0
s Choloepus_didactylus.ChoDid_scaffold_36182                19001 4 -     21363 a---aa-g
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           764305 4 +    964067 a---aa-g
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_629495              2546 4 -      3120 A---AA-A
i Chrysochloris_asiatica.ChrAsi_scaffold_629495         C 0 C 0
s Colobus_angolensis.KN983490.1                            283802 4 +    886210 A---AA-G
i Colobus_angolensis.KN983490.1                         C 0 C 0
s Colobus_guereza.LG08                                   96946691 4 - 156195979 a---aa-g
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_688201                               354 4 +      1908 a---aa-g
i Colobus_polykomos.k141_688201                         C 0 C 0
s Condylura_cristata.JH655880.1                          60622466 4 +  78930452 A---GA-A
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         2830 4 -      5782 a---aa-g
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 282953 4 -    399297 G---AA-G
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53035311 4 +  72327488 G---AA-G
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              2405 4 -     22648 G---AA-G
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            57810 4 -     70449 a---aa-g
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  214571 4 -    956709 A---AA-A
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 34652 4 -     67205 A---GA-A
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                21174 4 +     26546 A---TG-G
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             62313 4 -    236241 A---CT-G
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          185953 2 -   6883506 -----a-g
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16849435 4 +  31942871 a---aa-g
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80040945 4 -  96802777 a---aa-g
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18701518 4 -  18957592 A---AA-G
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 326553 4 +    993696 a---aa-g
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 I 11
s Diceros_bicornis.DicBicMic_scaffold_9545                   7185 4 +    151128 A---AA-G
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 I 11
s Dinomys_branickii.DinBra_scaffold_1996                   159939 4 +    228994 G---CA-G
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3660617 4 +   4240102 T---CA-A
i Dipodomys_ordii.KN672545.1                            C 0 I 16
s Dipodomys_stephensi.DipSte_scaffold_84338                  2971 4 -     11986 T---CA-A
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 I 16
s Dolichotis_patagonum.DolPat_scaffold_14102                40890 4 -     73477 A---GG-C
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           23000211 4 -  44670279 a---aa-g
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1496536 3 +   1727528 a---aa--
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7834476 4 +  15467074 a---aa-c
i Elephantulus_edwardii.JH947210.1                      C 0 I 12
s Ellobius_lutescens.LOEQ01003611.1                        244116 4 -    369425 G---AA-G
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Enhydra_lutris.KZ291749.1                              85877784 4 +  99434291 a---aa-g
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4709271 4 +   6522550 A---AA-G
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5856646 4 -   7175178 a---aa-g
i Equus_asinus.JREZ01000062.1                           C 0 I 33
s Equus_caballus.CM000402.2                              13355146 4 +  41866177 a---aa-g
i Equus_caballus.CM000402.2                             C 0 I 19
s Equus_przewalskii.ATBW01073585.1                          16636 4 +     92910 a---aa-g
i Equus_przewalskii.ATBW01073585.1                      C 0 I 19
s Erythrocebus_patas.Contig8                             48781147 4 -  48907691 a---aa-g
i Erythrocebus_patas.Contig8                            I 5 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          319169 4 +    330699 A---AA-G
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             65626 4 +     89355 A---AA-G
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              9588 4 +     13586 A---AA-G
i Eulemur_albifrons.k141_715837                         C 0 I 43
s Eulemur_collaris.k141_1015201                              2847 4 -      4292 A---AA-G
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            15984 4 +     36558 A---AA-G
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            12306 4 +     60246 a---aa-g
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                15791 4 +    109717 a---aa-g
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 3774 4 -     19505 A---AA-G
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                20449 4 +     27497 A---AA-G
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           22905 4 +     26808 A---AA-G
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                37637 4 +     46535 A---AA-G
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              20378 4 -     29447 A---AA-G
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129899251 4 - 159252932 a---aa-g
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129286226 4 - 158578461 a---aa-g
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 27325 4 +     52776 a---aa-g
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13896459 4 -  19261668 G---CA-A
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     215638 4 -    847004 A---AA-G
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           17999 4 -     43889 A---AA-G
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          15143 4 +     27357 A---AA-G
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               159890 4 +    324696 a---aa-g
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 I 18
s Giraffa_tippelskirchi.LVKQ01S012154.1                    186313 3 -    189561 A---AA--
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           16779 4 -     18683 A---AA-G
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_2641970                               546 4 +      9263 a---aa-g
i Gorilla_beringei.k141_2641970                         C 0 C 0
s Gorilla_gorilla.LT578340.1                             52344639 4 + 195582420 a---aa-g
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   80096 4 +    118900 a---aa-g
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         6373 4 +     10286 a---aa-g
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             4851 4 -     11661 a---aa-g
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                            10178 4 +     56096 a---aa-g
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        33427 4 -     42470 a---aa-g
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        50050 4 -     54384 a---aa-g
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              22950 4 +     53719 a---aa-a
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                33205 3 -     91191 A---AA--
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2560951 4 +  31725842 G---CA-G
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               63178 4 +     73687 A---AG-g
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 I 15
s Hippopotamus_amphibius.HipAmp_scaffold_1308              150959 4 +    277961 A---AA-G
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      283362 4 -    477199 a---aa-g
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_7653                5912 4 +     86108 a---aa-g
i Hipposideros_galeritus.HipGal_scaffold_7653           I 5 C 0
s Hoolock_leuconedys.ctg649                                   109220 4 +    115816 A---AA-G
i Hoolock_leuconedys.ctg649                                I 5 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 23421 4 -     67322 A---AA-G
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           21559 4 -    119109 A---TG-C
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_1816750                             2048 4 +      3202 A---AA-G
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1633646                              2018 4 -      2102 A---AA-G
i Hylobates_agilis.k141_1633646                         C 0 C 0
s Hylobates_klossii.k141_468230                              3536 4 +      5464 A---AA-G
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14628883 4 -  25970782 A---AA-G
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            1435 4 +      4161 A---AA-G
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             37745 4 -     60944 A---AA-G
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     9854 4 +     22540 A---CA-A
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7130686 4 +  13083262 a---aa-g
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   1896 4 +      3484 a---aa-g
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              13157 4 +     17520 A---AA-G
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8578172 4 +  11848649 a---aa-g
i Jaculus_jaculus.JH725517.1                            I 445 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               27776 4 +     37189 A---AA-G
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          54331 4 -    147782 A---AA-G
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lemur_catta.scaffold_1                                258411725 4 - 285822530 a---aa-g
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        29034 4 +     39228 A---AA-G
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            58398 4 +     63517 A---AA-G
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        36778 4 -     38897 A---AA-G
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      2824 4 -     13103 A---AA-G
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3091761 4 -   3498232 a---aa-g
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    21182 4 +     22452 A---AA-G
i Lepus_americanus.LepAme_scaffold_62849                C 0 I 18
s Lipotes_vexillifer.KE558548.1                            140091 4 +   3060487 a---aa-g
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg711                              183220 4 +    570588 A---AA-G
i Lophocebus_aterrimus.ctg711                           I 10 I 55
s Loris_lydekkerianus.k141_550999                           15601 4 +     84689 A---AA-G
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3783340 3 +   6799190 A---A--G
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20599098 4 -  62548349 a---ag-g
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11095520 5 +  39895028 A---AAAG
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_1195479                              4931 4 -     15622 A---AA-G
i Macaca_arctoides.k141_1195479                         C 0 I 55
s Macaca_assamensis.Contig48                             12918973 4 +  19716213 A---AA-G
i Macaca_assamensis.Contig48                            C 0 I 55
s Macaca_cyclopis.k119_883699                                3553 4 -     26467 A---AA-G
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           51424 4 +     63263 A---AA-G
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 3534 4 -     26361 A---AA-G
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_674993                                 4883 4 +     16544 A---AA-G
i Macaca_leonina.k141_674993                            C 0 I 55
s Macaca_maura.k141_188832                                   5263 4 -     30208 A---AA-G
i Macaca_maura.k141_188832                              C 0 I 55
s Macaca_mulatta.NC_041755.1                            108306970 4 + 196197964 A---AA-G
i Macaca_mulatta.NC_041755.1                            C 0 N 0
s Macaca_nemestrina.KQ004885.1                           11450221 4 +  11645122 A---AA-G
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_2105412                                  4791 4 -     16799 A---AA-G
i Macaca_nigra.k141_2105412                             C 0 I 55
s Macaca_radiata.k141_339052                                 4867 4 -     65833 A---AA-G
i Macaca_radiata.k141_339052                            C 0 I 55
s Macaca_siberu.k141_901100                                  5233 4 +     15974 A---AA-G
i Macaca_siberu.k141_901100                             C 0 I 55
s Macaca_silenus.Contig12                                43845365 4 +  43892939 A---AA-G
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               21534 4 -     24607 A---AA-G
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               8904 4 -     27140 A---AA-G
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold126                      7795757 4 -  48617986 A---AA-G
i Mandrillus_leucophaeus.scaffold126                    C 0 I 55
s Mandrillus_sphinx.Contig18                              8135883 4 -  29546661 A---AA-G
i Mandrillus_sphinx.Contig18                            C 0 I 55
s Manis_javanica.JSZB01003966.1                            152477 4 +    252755 A---AA-G
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             40071 4 +     58827 A---AA-G
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36878555 4 +  64221397 a---ag-g
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       65913 4 -    234502 C---Aa-g
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             6887 4 -     87323 A---AA-G
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 1569 4 +    115071 G---AA-G
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1051839 4 -  26018355 G---AA-G
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    2748 4 -     12939 A---AA-G
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16514754 4 +  47401472 A---AA-G
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  41778 4 -     48017 a---aa-g
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               25266 4 -     32043 A---AA-G
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22824913 4 -  98408828 G---AA-G
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8213321 4 +  10048721 a---aa-g
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            37810 4 +     45743 a---aa-g
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         6486 4 +     29742 a---aa-g
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        17257 4 -    104932 a---aa-g
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     5438 4 -     12809 a---aa-g
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 150538 4 +    154973 a---aa-g
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                163797 4 +    265003 a---aa-g
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  6554 3 -     19904 A---AA--
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  150625 4 -    168139 a---aa-g
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          24728 4 -    100666 A---AA-G
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70772144 4 +  92629107 G---AA-G
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75494198 4 +  98207768 G---AA-G
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67560950 4 +  89017189 G---AA-G
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74336924 4 +  97876770 G---AA-G
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             15184 4 +     98495 A---AA-G
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4428993 4 -  28371801 a---aa-g
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     94154 4 -    117718 G---CA-G
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               971606 4 +   8389877 a---ca-g
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5023026 4 +   6462685 a---ca-g
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3469110 4 -   3747815 a---ca-g
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        14351 4 +     66751 a---ca-g
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             7966 4 -      8794 A---AA-A
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            240929 4 -    362372 A---AT-G
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_1382660                              4137 4 +      5784 a---aa-g
i Nasalis_larvatus.k141_1382660                         C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4490655 4 -  14209539 a---aa-g
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3955129 4 -   4490290 a---aa-g
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  50865 4 +     94413 g---aa-g
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_762468                             554 4 -      2755 a---aa-g
i Nomascus_annamensis.k141_762468                       C 0 C 0
s Nomascus_concolor.k141_523891                              1199 4 +      1566 A---AA-G
i Nomascus_concolor.k141_523891                         C 0 I 48
s Nomascus_gabriellae.k141_1400361                           1105 4 -      2203 a---aa-g
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_44                          10087475 4 -  26722205 A---AA-G
i Nomascus_siki_b.tarseq_44                         C 0 I 48
s Nomascus_siki_a.k141_421408                                  1019 4 +     16235 a---aa-g
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                38385 5 +   3668941 a---aaag
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65572264 4 -  95554990 A---AA-G
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_771591                            15674 4 +     16181 A---AA-G
i Nycticebus_coucang.k141_771591                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65680452 4 +  89412551 A---AA-G
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            5000222 4 -  23139505 A---AA-G
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3689643 4 +  10294119 A---TA-G
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             685359 4 -   3126709 a---aa-g
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1083984 3 +   1425656 a---aa--
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         42060 1 +     78940 A-------
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  130709 4 +    145789 G---AA-G
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  43409 4 +     62360 G---AA-G
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7228803 4 -   7562323 a---aa-g
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              64507 4 -     66828 a---aa-g
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141884199 4 + 163896628 A---AA-G
i Oryctolagus_cuniculus.CM000803.1                      C 0 I 18
s Otocyon_megalotis.JAEUCK010005121.1                      315523 5 -    505867 A---GAAG
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        5500 4 -     53940 A---AA-G
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18013469 4 -  38779656 A---AA-G
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134082991 3 - 275406953 c---aa--
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      84225 3 +    140051 A---AA--
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                                53339748 4 + 205426864 A---AA-G
i Pan_paniscus.CM003386.1                               I 6 I 48
s Pan_troglodytes.CM009241.2                             52442669 4 + 196562556 A---AA-G
i Pan_troglodytes.CM009241.2                            I 6 I 48
s Panthera_onca.PanOnc_flattened_line_1615                  40245 4 +    295523 a---aa-g
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3644060 4 +  18214204 a---aa-g
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5033708 4 -   6340057 a---aa-g
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1071862 3 -   1292953 A---AA--
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               104807440 4 - 188283584 A---AA-G
i Papio_anubis.CM001492.2                               C 0 N 0
s Papio_cynocephalus.k141_4279166                            1551 4 +     14039 A---AA-G
i Papio_cynocephalus.k141_4279166                       C 0 I 55
s Papio_hamadryas.Contig2                                43125139 4 -  77290729 A---AA-G
i Papio_hamadryas.Contig2                               C 0 I 55
s Papio_kindae.k141_3207681                                 22605 4 +     50820 A---AA-G
i Papio_kindae.k141_3207681                             C 0 I 55
s Papio_papio.k141_1769448                                   5256 4 -     34951 A---AA-G
i Papio_papio.k141_1769448                              I 10 I 55
s Papio_ursinus.k141_4903560                                 1528 4 +     19798 A---AA-G
i Papio_ursinus.k141_4903560                            I 10 I 55
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    121727 4 -    135482 A---AA-G
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          11164 4 -     23713 A---AA-G
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           12315 4 +     61070 A---AA-G
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       2588 4 +     49596 A---CA-A
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4955773 4 -   8017169 G---AA-G
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              3270 4 +      8220 A---AA-G
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Piliocolobus_badius.k141_512007                           29661 4 +     37672 a---aa-g
i Piliocolobus_badius.k141_512007                       C 0 C 0
s Piliocolobus_gordonorum.k141_736355                       29578 4 +     67079 a---aa-g
i Piliocolobus_gordonorum.k141_736355                   C 0 C 0
s Piliocolobus_kirkii.k141_451083                            4742 4 -     13367 A---AA-G
i Piliocolobus_kirkii.k141_451083                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000342.1                3428343 4 -   4356645 A---AA-G
i Piliocolobus_tephrosceles.PDMG02000342.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            99888 4 +    112873 A---AA-G
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           9717 4 +     21690 A---GA-G
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       26423 4 +     44506 A---AA-G
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        26636 4 +     67491 A---AA-G
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      16875 4 -     98129 A---AA-G
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     26476 4 +    147771 A---AA-G
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         3111 4 -     43940 A---AA-G
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          7194 4 -     55515 A---AA-G
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         26548 4 +    152463 A---AA-G
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       4356 4 -    119457 A---AA-G
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         16270 4 +    134592 A---AA-G
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          26858 4 -     75465 A---AA-G
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.CM009265.2                               104014436 4 - 193656255 A---AA-G
i Pongo_abelii.CM009265.2                               I 6 I 48
s Pongo_pygmaeus.ctg127                                   6237398 4 -   6432864 A---AA-G
i Pongo_pygmaeus.ctg127                                 I 6 I 48
s Presbytis_comata.k141_678168                              10868 4 +     11126 A---AA-G
i Presbytis_comata.k141_678168                          C 0 C 0
s Presbytis_mitrata.k141_1767317                            10857 4 +     15869 A---AA-G
i Presbytis_mitrata.k141_1767317                        C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                4284 4 -      9567 A---AG-G
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 I 15
s Prolemur_simus.MPIZ01000048.1                           6853099 4 +  12164890 A---AA-G
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     21906 4 -     30946 N---NN-N
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         8183 4 +     11805 A---AA-G
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           47517 4 +     52369 A---AA-G
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         39904 4 -     44753 a---aa-g
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            21827 4 +     27322 A---AA-G
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       21476 4 -     53241 A---AA-G
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         43739 4 -     48185 A---AA-G
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           38564 4 +     77221 G---AA-G
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            6445 4 -     27784 a---aa-g
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        250640 4 -    344369 A---AA-G
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Puma_concolor.QAVW01000427.1                          131540357 4 - 161321710 a---aa-g
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_951151                              2894 4 -      8225 a---aa-g
i Pygathrix_cinerea.k141_951151                         C 0 C 0
s Pygathrix_nigripes_b.ctg25                                14340730 4 -  15297009 a---aa-g
i Pygathrix_nigripes_b.ctg25                               C 0 C 0
s Pygathrix_nigripes_a.k141_758202                             2911 4 -      8240 a---aa-g
i Pygathrix_nigripes_a.k141_758202                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                20849 3 +     68503 A---AA--
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13917991 4 +  90463843 G---AA-G
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   152255193 4 - 206558726 A---AA-G
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg241                            462001 4 +   1472273 a---aa-g
i Rhinopithecus_strykeri.ctg241                         C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                      1260 3 -      4338 A---AA--
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15676879 4 -  43202129 A---AA-G
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        8792 4 +     34089 A---AA-G
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              8732 4 -     60842 A---AA-G
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              8826 4 +     67014 A---AA-G
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              8803 4 +     60816 A---AA-G
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 8740 4 -     76454 A---AA-G
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17345525 4 -  30362882 a---aa-g
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         24846 4 -     62485 a---aa-g
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   39940 4 -    114521 A---GA-T
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1743075                       45439 4 +     45790 A---AA-G
i Semnopithecus_entellus.k141_1743075                   C 0 C 0
s Semnopithecus_hypoleucos.k141_2141024                      1212 4 -      8815 A---AA-G
i Semnopithecus_hypoleucos.k141_2141024                 C 0 C 0
s Semnopithecus_johnii.k141_1300894                          1229 4 +     13764 A---AA-G
i Semnopithecus_johnii.k141_1300894                     C 0 C 0
s Semnopithecus_priam.k141_368201                            9968 4 -     20692 A---AA-G
i Semnopithecus_priam.k141_368201                       C 0 C 0
s Semnopithecus_schistaceus.k141_628310                     45513 4 -     53123 A---AA-G
i Semnopithecus_schistaceus.k141_628310                 C 0 C 0
s Semnopithecus_vetulus.k141_748269                          4567 4 +     17284 A---AA-G
i Semnopithecus_vetulus.k141_748269                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  105773 3 -    120886 G---AA--
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            23889 4 +    739146 A---AA-G
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17774125 4 -  27805282 G---AA-G
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2244388 4 +   2842873 a---aa-g
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             239427 7 -    276980 AAAaaa-g
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            33542 4 +     62062 a---aa-g
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189275332 4 + 218635234 A---AA-G
i Sus_scrofa.CM000824.4                                 C 0 I 12
s Symphalangus_syndactylus.tarseq_24                        19142 4 -  13920577 A---AA-G
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                2675 4 +     20549 a---aa-g
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               17639 4 +     45698 A---AA-A
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      811133 4 +   1148477 A---AA-G
i Tapirus_indicus.TapInd_scaffold_176                   C 0 I 9
s Tapirus_terrestris.TapTer_scaffold_14939                  61775 4 +     99546 A---AA-G
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 I 9
s Theropithecus_gelada.CM009951.1                       106203242 4 - 194193292 A---AA-G
i Theropithecus_gelada.CM009951.1                       C 0 N 0
s Tolypeutes_matacus.TolMat_scaffold_475685                   730 4 -      3104 a---aa-g
i Tolypeutes_matacus.TolMat_scaffold_475685             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  138439 4 -    259118 a---aa-g
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_672638                         4812 4 +     38635 A---AA-G
i Trachypithecus_auratus.k141_672638                    C 0 C 0
s Trachypithecus_crepusculus.k141_863597                     4805 4 -     23436 A---AA-G
i Trachypithecus_crepusculus.k141_863597                C 0 C 0
s Trachypithecus_cristatus.k141_968903                      32454 4 +     43409 A---AA-G
i Trachypithecus_cristatus.k141_968903                  C 0 C 0
s Trachypithecus_francoisi.k141_1012484                       738 4 +      8809 A---AA-G
i Trachypithecus_francoisi.k141_1012484                 C 0 C 0
s Trachypithecus_geei.k141_137495                           29967 4 -     42322 a---aa-g
i Trachypithecus_geei.k141_137495                       C 0 C 0
s Trachypithecus_germaini.k141_240878                        4932 4 -     24955 A---AA-G
i Trachypithecus_germaini.k141_240878                   C 0 C 0
s Trachypithecus_hatinhensis.k141_641377                     1103 4 +      1365 A---AA-G
i Trachypithecus_hatinhensis.k141_641377                C 0 C 0
s Trachypithecus_laotum.k141_897381                         45507 4 -     53586 A---AA-G
i Trachypithecus_laotum.k141_897381                     C 0 C 0
s Trachypithecus_leucocephalus.k141_352489                   1078 4 +      9423 A---AA-G
i Trachypithecus_leucocephalus.k141_352489              C 0 C 0
s Trachypithecus_melamera.k141_950981                        2093 4 -      3512 A---AA-G
i Trachypithecus_melamera.k141_950981                   C 0 C 0
s Trachypithecus_obscurus.k141_588024                        4817 4 +      4963 A---AA-G
i Trachypithecus_obscurus.k141_588024                   C 0 C 0
s Trachypithecus_phayrei.ctg364                            232316 4 -   1198723 a---aa-g
i Trachypithecus_phayrei.ctg364                         C 0 C 0
s Trachypithecus_pileatus.k141_532233                       29987 4 -     40754 a---aa-g
i Trachypithecus_pileatus.k141_532233                   C 0 C 0
s Trichechus_manatus.JH594618.1                          16090172 4 +  31416278 a---aa-g
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2798105 4 -   3938065 A---AA-G
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                   10037 4 +     13056 A---AA-G
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69317532 4 -  96451834 a---aa-g
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                     396 4 +    136657 A---TT-G
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 C 0
s Ursus_maritimus.KK498671.1                              6521060 4 +  28682327 a---aa-g
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  9742 3 -     20643 A---aa--
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             29277 3 -     33872 A---aa--
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1528568 4 -   2331223 A---AA-T
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                144750 5 -    281493 A---AAAG
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       131877 4 -    134049 A---AA-G
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        220216 4 -    227762 a---aa-g
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_256618                      867 4 -      2259 a---aa-a
i Zapus_hudsonius.ZapHud_scaffold_256618                I 405 I 349
s Ziphius_cavirostris.ZipCav_flattened_line_60625            2256 4 -     13665 A---AA-G
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Petromus_typicus.PetTyp_scaffold_33007                    17492 0 -     36578 C
e Erinaceus_europaeus.JH835290.1                         11541587 40 +  16010500 I
e Tragulus_javanicus.TraJav_scaffold_14717                   9488 743 +     90398 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Rhinolophus_sinicus.LVEH01000179.1                      1792951 0 +   2252614 C
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Lasiurus_borealis.LasBor_scaffold_59542                    5872 0 +     26176 C
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Tarsius_wallacei.k141_48636                               64696 0 +     65473 C
e Tarsius_lariang.k141_609102                               31387 0 +     42269 C
e Rhinopithecus_bieti.k119_554384                            2917 0 -     17045 C
e Pithecia_vanzolinii.k141_831006                           15424 0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514 0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521 0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292 0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093 0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038 0 +     78826 C
e Pithecia_albicans.k141_991845                             45662 0 -     61926 C
e Cephalopachus_bancanus.k141_702587                        12545 0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530 0 +    345090 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               17867 43 +    209709 GAT----GTG-AAT--TT----G---C----A--ATC-AGA--------------G--AAAC---------CTGAGTT-C---------------C-ACC-A---------------T--GCTT
s Acinonyx_jubatus.LLWD01000356.1                         2039835 32 +   3721120 cat----gtg-aac--tt---tg---g----a--tta-tga--------------c--agcc---------ctgagt-----------------------------------------------
i Acinonyx_jubatus.LLWD01000356.1                       C 0 I 12
s Acomys_cahirinus.AcoCah_scaffold_1625                    118170 52 -    189883 TAC----ATG-AGT--TG----A---G----A--ATC-ACA--------------C--CAATCACACCAATCTGTGTT-T---------------C-ACT-G---------------T--GGTT
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10663796 32 +  23371972 cat----gtg-aca--tt---tg---g----a--gtc-tga--------------c--aagc---------ctgagt-----------------------------------------------
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 I 12
s Ailurus_fulgens.LNAC01000003.1                          7100325 32 -  16596857 GAT----GTG-ACT--TT---TG---G----A--GTC-TAA--------------C--AAGC---------CTGAGA-----------------------------------------------
i Ailurus_fulgens.LNAC01000003.1                        C 0 I 12
s Allactaga_bullata.AllBul_scaffold_141108                   1161 43 -      7259 CAC----TTG-AGT--CT----T---G----A--ATC-AAA--------------T--CAAT---------CTAAGAC-C---------------C-ACT-G---------------T--AGTT
i Allactaga_bullata.AllBul_scaffold_141108              C 0 I 8
s Allenopithecus_nigroviridis.k141_2469532                   5742 42 -     60446 AAT----GTG-AAT--TT----G---G----A--ATC-AGA--------------C--AAAC----------TGAGTT-C---------------C-ACC-A---------------T--GGTT
i Allenopithecus_nigroviridis.k141_2469532              I 9 C 0
s Allochrocebus_lhoesti.k141_3566948                         6459 42 -     29318 aat----gtg-aat--tt----g---g----a--atc-aga--------------c--aaac----------tgagtt-c---------------c-acc-a---------------t--ggtt
i Allochrocebus_lhoesti.k141_3566948                    I 32 C 0
s Allochrocebus_preussi.k141_1108977                         5397 42 +     38766 aat----gtg-aat--tt----g---g----a--atc-aga--------------c--aaac----------tgagtt-c---------------c-acc-a---------------t--ggtt
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          6353 42 -     80423 aat----gtg-aat--tt----g---g----a--acc-aga--------------c--aagc----------tgagtt-c---------------c-acc-a---------------t--ggtt
i Allochrocebus_solatus.k141_371672                     I 32 C 0
s Alouatta_belzebul.k141_276091                              1336 43 +     19852 gat----gtg-aat--tt----g---g----a--atc-aga--------------c--aaac---------ctgagtt-c---------------c-acc-a---------------t--gctt
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                3580 43 -     12443 gat----gtg-aat--ct----g---g----a--atc-aga--------------c--aaac---------ctgagtt-c---------------c-acc-a---------------t--gctt
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                              879 43 +      5070 gat----gtg-aat--tt----g---g----a--atc-aga--------------c--aaac---------ctgagtt-c---------------c-acc-a---------------t--gctt
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                  624 43 -      1641 gat----gtg-aat--tt----g---g----a--atc-aga--------------c--aaac---------ctgagtt-c---------------c-acc-a---------------t--gctt
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          3363 43 -     24210 gat----gtg-aat--tt----g---g----a--atc-aga--------------c--aaac---------ctgagtt-c---------------c-acc-a---------------t--gctt
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           29945 43 -     30219 gat----gtg-aat--tt----g---g----a--atc-aga--------------c--aaac---------ctgagtt-c---------------c-acc-a---------------t--gctt
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_405616                              5781 43 +     16794 gat----gtg-aat--tt----g---g----a--atc-aga--------------c--aaac---------ctgagtt-c---------------c-acc-a---------------t--gctt
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                             913 43 -      1470 gat----gtg-aat--tt----g---g----a--atc-aga--------------c--aaac---------ctgagtt-c---------------c-acc-a---------------t--gctt
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             5058 43 -      9835 gat----gtg-aat--tt----g---g----a--atc-aga--------------c--aaac---------ctgagtt-c---------------c-acc-a---------------t--gctt
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3525859 45 +   4113121 -------GTG-AAT--TT---TA---G----A--GTC-CAACAGCCAGAGTTCCAC--AAAC---------CAGAGTT-C--------------------------------------------
i Ammotragus_lervia.NIVO01013474.1                      C 0 I 9
s Anoura_caudifer.AnoCau_scaffold_422                      392889 43 -    631301 CAT----TTG-CCT--TT--A-G---G----A---TC-TGA--------------C--AAAC---------TTAAGTT-C---------------T-ACT-G---------------T--GGTT
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             3292 45 +     55446 -------GTG-AAT--TT---TA---G----A--GTC-CAACAGCCAGAGTTCCAA--GAAC---------CAGTGTT-C--------------------------------------------
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 I 9
s Aotus_azarae.k141_3170768                                 66667 43 +     78111 gat----gtg-aat--tt----a---g----a--atc-aga--------------c--caac---------ctgagtt-c---------------c-acc-a---------------t--gctt
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            9615 43 +     22701 GAT----GTG-AAT--TT----A---G----A--ATC-AGA--------------C--CAAC---------CTGAGTT-C---------------C-ACC-A---------------T--GCTT
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5753572 43 +   9889416 GAT----GTG-AAT--TT----A---G----A--ATC-AGA--------------C--CAAC---------CTGAGTT-C---------------C-ACC-A---------------T--GCTT
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                            10171 43 -    104377 gat----gtg-aat--tt----a---g----a--atc-aga--------------c--caac---------ctgagtt-c---------------c-acc-a---------------t--gctt
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                              10178 43 +     23246 gat----gtg-aat--tt----a---g----a--atc-aga--------------c--caac---------ctgagtt-c---------------c-acc-a---------------t--gctt
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     2707 43 +     11424 CAT----TTG-CAT--TT----A---A----A--ATC-TGA--------------C--ACTT---------CCTAGTT-G---------------C-ACT-G---------------T--GCTT
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        6795 32 +      9265 CAC----ATG-ATT--TT----G---G----A--ATC-ACA--------------C--AAAT---------CTGagat----------------------------------------------
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                11294 44 -     29036 CAT----TTG-ACT--TT---TG---G----A--GTC-TGA--------------C--AAAC---------TTGAGCT-C---------------T-ACT-G---------------T--GTTT
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9543466 43 +  39197703 gat----gtg-aat--tt----a---g----a--atc-aaa--------------c--aaac---------ctgagtt-c---------------c-acc-a---------------t--gctt
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             64740 43 +     85812 gat----gtg-aat--tt----a---g----a--atc-aaa--------------c--aaac---------ctgagtt-c---------------c-acc-a---------------t--gctt
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                15753 43 +     89302 gat----gtg-aat--tt----a---g----a--atc-aaa--------------c--aaac---------ctgagtt-c---------------c-acc-a---------------t--gctt
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             20254 43 -     58268 gat----gtg-aat--tt----a---g----a--atc-aaa--------------c--aaac---------ctgagtt-c---------------c-acc-a---------------t--gctt
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             68248 43 +    119057 gat----gtg-aat--tt----a---g----a--atc-aaa--------------c--aaac---------ctgagtt-c---------------c-acc-a---------------t--gctt
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              10217 43 -     25888 gat----gtg-aat--tt----a---g----a--atc-aaa--------------c--aaac---------ctgagtt-c---------------c-acc-a---------------t--gctt
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                11279 43 -     16375 caa----gtg-att--tt----g---g----a--atc-aca--------------c--aaac---------ctgagtt-c---------------c-atc-a---------------t--ggtt
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               4895 43 +      6337 caa----gtg-att--tt----g---g----a--atc-aca--------------c--aaac---------ctgagtt-c---------------c-atc-a---------------t--ggtt
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26384330 59 +  51448160 cat----gtg-act--tg---tt---g----a--gcc-tga--------------c--aaac---------ctgagtt-c---------------c-acaaacctgacttccactg-t--ggtt
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        9503 59 -     13118 cat----gtg-act--tg---tt---g----a--gcc-tga--------------c--aaac---------ctgagtt-c---------------c-acaaacctgacttccactg-t--ggtt
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   48323 45 -     72089 -------GTG-AAT--TT---TA---G----A--GTC-CAACAGCCAGAGTCCCAC--AAAC---------CAGAGTT-C--------------------------------------------
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 I 9
s Bison_bison.KN264915.1                                   302467 33 -   6870073 -------gtg-aat--tt---ta---a----a--gtC-CAACATCCAGAGTTCTAC--------------------------------------------------------------------
i Bison_bison.KN264915.1                                C 0 I 16
s Bos_indicus.CM003021.1                                 22956565 33 + 161108492 -------gtg-aat--tt---ta---a----a--gtC-CAACATCCAGAGTTCTAC--------------------------------------------------------------------
i Bos_indicus.CM003021.1                                C 0 I 16
s Bos_mutus.JH883513.1                                     418806 33 +    998990 -------gtg-aat--tt---ta---a----a--gtC-CAACATCCAGAGTTCTAC--------------------------------------------------------------------
i Bos_mutus.JH883513.1                                  C 0 I 16
s Bos_taurus.CM000177.6                                  22665219 33 + 158972876 -------gtg-aat--tt---ta---a----a--gtC-CAACATCCAGAGTTCTAC--------------------------------------------------------------------
i Bos_taurus.CM000177.6                                 C 0 I 16
s Bubalus_bubalis.KI419065.1                               674973 45 +   1914593 -------GTG-AAT--TT---TA---G----A--GTC-CAACAGCCAGAGTTCCAC--AAAC---------TAGAGTT-C--------------------------------------------
i Bubalus_bubalis.KI419065.1                            C 0 I 9
s Cacajao_ayresi.k141_724503                               118116 43 -    171031 gat----gtg-aat--tt----a---g----a--atc-aga--------------c--aaac---------ctgagtt-c---------------c-atc-a---------------t--gctt
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 17136 43 +    125063 gat----gtg-aat--tt----a---g----a--atc-aga--------------c--aaac---------ctgagtt-c---------------c-atc-a---------------t--gctt
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                19183 43 -    216513 gat----gtg-aat--tt----a---g----a--atc-aga--------------c--aaac---------ctgagtt-c---------------c-atc-a---------------t--gctt
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       11726 43 -    134917 gat----gtg-aat--tt----a---g----a--atc-aga--------------c--aaac---------ctgagtt-c---------------c-atc-a---------------t--gctt
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3223464 48 -   8989139 CAT----GTG-ACT--TT---TA---G----A--ATC-CTA--------------G--AAGC---------CTGAGTT-C---------------C-ACA-A----------ACCT-G--AGTT
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           401165 48 -  15254737 CAT----GTG-ACT--TT---TA---G----A--ATC-CTA--------------G--AAGC---------CTGAGTT-C---------------C-ACA-A----------ACCT-G--AGTT
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2976902 48 +   6889770 CAT----GTG-ACT--TT---TA---G----A--ATC-CTA--------------G--AAGC---------CTGAGTT-C---------------C-ACA-A----------ACCT-G--AGTT
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11526675 32 +  39901454 CAT----GAG-ACT--TT---TG---A----A--GTC-TGC--------------C--AAGC---------CTGAGT-----------------------------------------------
i CanFam4.chr31                                         C 0 I 12
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   21649 32 +     87036 CAT----GAG-ACT--TT---TG---A----A--GTC-TGC--------------C--AAGC---------CTGAGT-----------------------------------------------
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 I 12
s Canis_lupus_dingo.QKWQ01001993.1                       11273358 32 -  35597290 CAT----GAG-ACT--TT---TG---A----A--GTC-TGC--------------C--AAGC---------CTGAGT-----------------------------------------------
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 I 12
s Canis_lupus_familiaris.chr31                           11096069 32 +  39895921 CAT----GAG-ACT--TT---TG---A----A--GTC-TGC--------------C--AAGC---------CTGAGT-----------------------------------------------
i Canis_lupus_familiaris.chr31                          C 0 I 12
s Canis_lupus_orion.HG994411.1                           16462854 32 -  44759192 CAT----GAG-ACT--TT---TG---A----A--GTC-TGC--------------C--AAGC---------CTGAGT-----------------------------------------------
i Canis_lupus_orion.HG994411.1                          C 0 I 12
s Capra_aegagrus.CM003214.1                              21333803 45 + 157394656 -------GTG-AAT--TT---TA---G----A--GTC-TAACAGCCAGAGTTCCAC--AAAC---------CAGACTT-C--------------------------------------------
i Capra_aegagrus.CM003214.1                             C 0 I 9
s Capra_hircus.CM004562.1                               135712158 45 - 157403528 -------GTG-AAT--TT---TA---G----A--GTC-TAACAGCCAGAGTTCCAC--AAAC---------CAGACTT-C--------------------------------------------
i Capra_hircus.CM004562.1                               C 0 I 9
s Capromys_pilorides.CapPil_scaffold_529800                   536 42 -      2320 TGT----AGG-AGT--TT----G---G----A--AAT-AA---------------C--AAAT---------CTGAATA-C---------------C-CCT-G---------------T--GATT
i Capromys_pilorides.CapPil_scaffold_529800             C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               62310 44 +     67245 cat----ttg-act--tc---ca---g----a--gtc-tga--------------c--aaac---------ttgagct-c---------------t-act-g---------------t--ggtt
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_1326                      305 43 -    202837 CAC----ATG-AAT--TT----G---G----A--ATA-AGA--------------C--TGAT---------CCATCTT-C---------------C-ACT-G---------------T--GGTT
i Castor_canadensis.CasCan_scaffold_1326                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   162994 23 -    276539 -------------------------------A--GTC-TGA--------------T--AAGT---------CTGAGTT-C---------------C-AC-------------------------
i Catagonus_wagneri.CatWag_scaffold_1305                I 12 I 7
s Cavia_aperea.AVPZ01000278.1                            15789997 42 -  24422027 TGC----ATG-AGC--TT----A---G----A--AAC-AT---------------C--AAAT---------CTGAGTT-C---------------C-CTT-G---------------T--GACT
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15801936 42 -  24440124 TGC----ATG-AGC--TT----A---G----A--AAC-AT---------------C--AAAT---------CTGAGTT-C---------------C-CTT-G---------------T--GACT
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       180108 42 +    436027 TGC----ATG-AGC--TT----A---G----A--AAC-AT---------------C--AAAT---------CTGAGTT-C---------------C-CTT-G---------------T--GACT
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18895841 43 -  29618158 gat----gtg-aat--tt----a---g----a--atc-aga--------------c--aaac---------ctgagtt-c---------------c-acc-a---------------t--gctt
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                12491 43 -     26817 gat----gtg-aat--tt----a---g----a--atc-aga--------------c--aaac---------ctgagtt-c---------------c-acc-a---------------t--gctt
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                16735 43 +     25043 gat----gtg-aat--tt----a---g----a--atc-aga--------------c--aaac---------ctgagtt-c---------------c-acc-a---------------t--gctt
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4367912 46 +   7569818 --------------------------g----a--gtc-caa--------------a--aaac---------ctgagtt-c---------------c-acaaacctgagttc---tgctgttgtt
i Ceratotherium_simum.JH767818.1                        I 11 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         7669 46 -      9338 --------------------------G----A--GTC-CAA--------------A--AAAC---------CTGAGTT-C---------------C-ACAAA--CCTGAGTTCTGC-TGTTGTT
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    I 11 C 0
s Cercocebus_atys.KQ010443.1                              6559683 42 +   6739814 AAT----GTG-AAT--TT----G---G----A--ATC-AGA--------------C--AAAC----------TGAGTT-C---------------C-ACC-A---------------T--GGTT
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      31160 42 +     60454 aat----gtg-aat--tt----g---g----a--atc-aga--------------c--aaac----------tgagtt-c---------------c-acc-a---------------t--gatt
i Cercocebus_chrysogaster.k141_2328246                  I 32 C 0
s Cercocebus_lunulatus.k141_4634644                          6364 42 -     21101 aat----gtg-aat--tt----g---g----a--atc-aga--------------c--aaac----------tgagtt-c---------------c-acc-a---------------t--ggtt
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         63674 42 -    107033 aat----gtg-aat--tt----g---g----a--atc-aga--------------c--aaac----------tgagtt-c---------------c-acc-a---------------t--ggtt
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        6537 42 -     17608 aac----gtg-aat--tt----g---g----a--atc-aga--------------c--aaac----------tgagtt-c---------------c-acc-a---------------t--ggtt
i Cercopithecus_ascanius.k141_4123525                   I 32 C 0
s Cercopithecus_cephus.k141_3893260                          3702 42 +     45019 aac----gtg-aat--tt----g---g----a--atc-aga--------------c--aaac----------tgagtt-c---------------c-acc-a---------------t--ggtt
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           3978 42 +     15177 aat----gtg-aat--tt----g---g----a--atc-aga--------------c--aaac----------tgagtt-c---------------c-atc-a---------------t--ggtt
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          6584 42 +     16677 aat----gtg-aat--tt----g---g----a--atc-aga--------------c--aagc----------tgagtt-c---------------c-acc-a---------------t--ggtt
i Cercopithecus_hamlyni.k141_129805                     I 32 C 0
s Cercopithecus_lowei.k141_623764                           28774 42 +     35983 aat----gtg-aat--tt----g---g----a--atc-aga--------------c--aaac----------tgagtt-c---------------c-acc-a---------------t--ggtt
i Cercopithecus_lowei.k141_623764                       I 32 C 0
s Cercopithecus_albogularis.ctg51                              11995305 42 +  12117833 aat----gtg-aat--tt----g---g----a--atc-aga--------------c--aaac----------tgagtt-c---------------c-acc-a---------------t--ggtt
i Cercopithecus_albogularis.ctg51                             I 32 C 0
s Cercopithecus_mona.ctg12                               46482281 42 +  46592721 aat----gtg-aat--tt----g---g----a--atc-aga--------------c--aaac----------tgagtt-c---------------c-acc-a---------------t--ggtt
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                        398 42 -     27215 aat----gtg-aat--tt----g---g----a--atc-aga--------------c--aaac----------tgagtt-c---------------c-acc-a---------------t--ggtt
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       6598 42 +     35577 aat----gtg-aat--tt----g---g----a--atc-aga--------------c--aaac----------tgagtt-c---------------c-acc-a---------------t--ggtt
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        6392 42 -     25661 aac----gtg-aat--tt----g---g----a--atc-aga--------------c--aaac----------tgagtt-c---------------c-acc-a---------------t--ggtt
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        6564 42 -     17744 aat----gtg-aat--tt----g---g----a--atc-aga--------------c--aaac----------tgagtt-c---------------c-acc-a---------------t--ggtt
i Cercopithecus_pogonias.k141_3109732                   I 32 C 0
s Cercopithecus_roloway.k141_2263608                        25933 42 +     37128 aat----gtg-aat--tt----g---g----a--atc-aga--------------c--aaac----------tgagtt-c---------------c-acc-a---------------t--ggtt
i Cercopithecus_roloway.k141_2263608                    I 32 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           4894 44 -      6963 tac----atg-act--tt---tg---g----a--gtc-aga--------------t--aaac---------ccaagtt-c---------------c-atc-a---------------t--ggtt
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           63488 43 -     68416 cac----gtg-att--tt----g---g----a--atc-aca--------------c--aacc---------ctgagtt-c---------------t-acc-a---------------t--ggtt
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                           12608 43 +     13308 cac----gtg-att--tt----g---g----a--atc-aca--------------c--aacc---------ctgagtt-c---------------t-acc-a---------------t--aatt
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             9778 42 -     18223 GAT----GTG-AAT--TT----A---G----A--ATC-AGA--------------T--AAAC---------CTGA-TT-C---------------C-ACC-A---------------T--GCTT
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              1516 42 +    188999 GAT----GTG-AAT--TT----A---G----A--ATC-AGA--------------T--AAAC---------CTGA-TT-C---------------C-ACC-A---------------T--GCTT
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           45815 42 +     57117 GAT----GTG-AAT--TT----A---G----A--ATC-AGA--------------T--AAAC---------CTGA-TT-C---------------C-ACC-A---------------T--GCTT
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          50495 42 +     54541 GAT----GTG-AAT--TT----A---G----A--ATC-AGA--------------T--AAAC---------CTGA-TT-C---------------C-ACC-A---------------T--GCTT
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15964688 42 +  43084221 TGC----ATG-AAC--TT----G---G----A--AAC-AT---------------C--AAAT---------CTGAATT-C---------------C-cct-g---------------t--ggtt
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         75295 43 +    196370 gat----gtg-aat--tt----a---t----a--atc-aga--------------c--aaac---------ctgagtt-c---------------c-acc-a---------------t--gctt
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          19476 43 +     40510 gat----gtg-aat--tt----a---t----a--atc-aga--------------c--aaac---------ctgagtt-c---------------c-atc-a---------------t--gctt
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15144118 42 -  15256731 aat----gtg-aat--tt----g---g----a--atc-aga--------------c--aaac----------tgagtt-c---------------c-acc-a---------------t--ggtt
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      38582 42 -     53260 aat----gtg-aat--tt----g---g----a--atc-aga--------------c--aaac----------tgagtt-c---------------c-acc-a---------------t--ggtt
i Chlorocebus_pygerythrus.k141_1486215                  I 32 C 0
s Chlorocebus_sabaeus.CM001963.2                        101149141 42 + 101219884 AAT----GTG-AAT--TT----G---G----A--ATC-AGA--------------C--AAAC----------TGAGTT-C---------------C-ACC-A---------------T--GGTT
i Chlorocebus_sabaeus.CM001963.2                        N 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                19005 42 -     21363 --c----atg-act--tt---tg---g----a--gtc-tga--------------c--aaac---------ctgagtt-c---------------c-acc-c---------------t--agtt
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           764309 42 +    964067 --c----atg-act--tt---tg---g----a--gtc-tga--------------c--aaac---------ctgagtt-c---------------c-acc-c---------------t--agtt
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_629495              2550 47 -      3120 CACTTGCATG-AAT--TG---TG---G----A--GTC-AGA--------------C--AAAT---------CTAAATT-C---------------A-AAT-G---------------T---ATT
i Chrysochloris_asiatica.ChrAsi_scaffold_629495         C 0 C 0
s Colobus_angolensis.KN983490.1                            283806 43 +    886210 CAC----GTG-ACT--TT----G---A----A--ATC-AGC--------------C--GAAC---------CTGAGTT-C---------------C-ACC-A---------------C--GCTT
i Colobus_angolensis.KN983490.1                         C 0 I 5
s Colobus_guereza.LG08                                   96946695 43 - 156195979 cac----gtg-act--tt----g---a----a--atc-agc--------------c--gaac---------ctgagtt-c---------------c-acc-a---------------c--gctt
i Colobus_guereza.LG08                                  C 0 I 5
s Colobus_polykomos.k141_688201                               358 43 +      1908 cac----gtg-act--tt----g---a----a--atc-agc--------------c--gaac---------ctgagtt-c---------------c-acc-a---------------c--gctt
i Colobus_polykomos.k141_688201                         C 0 I 5
s Condylura_cristata.JH655880.1                          60622470 42 +  78930452 AAA----GTA-ACT--T-----G---A----A--ATC-CTG--------------C--AGAC---------CTGACTT-c---------------c-act-g---------------t--gttt
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         2834 42 -      5782 cac----gtg-act--tt---tg---g----a--gtc-tga--------------c--agac---------ctg--tt-g---------------t-act-c---------------t--ggtt
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 282957 43 -    399297 CAC----ATG-AAT--TT----G---G----A--ATC-ACA--------------C--CAAC---------TTTAGTT-C---------------C-ATT-G---------------T--GGTT
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53035315 46 +  72327488 CAC-----TG-AGT--ATGGATG---G----A--ATC-AGC--------------C--CAAT---------CCTAGTT-C---------------C-ACT-A---------------A--GGTT
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              2409 55 -     22648 CAA----T---ATT--TT--A-G---G----A--TTC-CTA--------------C--AAAC---------CAGAGTT-C---------------C-ACA-A-AATTGAATTCCAC-C--AGTT
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            57814 32 -     70449 cat----gtg-act--tt---tg---g----a--ttt-aga--------------c--aagc---------ctgagt-----------------------------------------------
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 I 12
s Ctenodactylus_gundi.CteGun_scaffold_447                  214575 41 -    956709 AGT----GTG-GCT--TT----G---T----A--CTC-AGG--------------C--AAAG---------CTGAGCC-C---------------T-ACT-G---------------T--GG--
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 34656 42 -     67205 TGC----AGG-ACT--TT----G---G----A--AAT-AT---------------C--AAAT---------CTGAATT-C---------------C-CCT-G---------------T--GATC
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                21178 42 +     26546 TGC----ATG-AGT--TT----G---G----A--AAC-AT---------------C--AAAT---------ATGAGTT-C---------------C-CCT-G---------------T--GATT
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             62317 42 -    236241 TGC----ATG-AGT--TT----G---G----A--AAC-AT---------------C--AAAT---------CTGAGTT-C---------------C-CCT-G---------------T--GACT
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          185955 44 -   6883506 tac----atg-act--tt---tg---g----a--gtc-aca--------------t--aaac---------ccaagtt-c---------------t-acc-a---------------t--ggct
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16849439 43 +  31942871 cac----atg-att--tt----g---g----a--atc-aca--------------c--aaac---------ctgagtt-c---------------c-acc-a---------------t--ggtt
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80040949 59 -  96802777 cat----gtg-act--tg---tt---g----a--gcc-tga--------------c--aaac---------ctgagtt-c---------------c-acaaacctgacttccactg-t--ggtc
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18701522 44 -  18957592 CAT----TTG-ACT--TT---TG---G----A--ATT-TGA--------------C--AAAC---------TTGggtt-t---------------t-act-g---------------t--gttt
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 326568 46 +    993696 --------------------------g----a--gtc-caa--------------a--aaac---------ctgagtt-c---------------c-acaaacctgagttccgc---tgttgtt
i Dicerorhinus_sumatrensis.PEKH010003161.1              I 11 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   7200 46 +    151128 --------------------------G----A--GTC-CAA--------------A--AAAC---------CTGAGTT-C---------------C-ACAAA--CCTGAGTTCTGC-TGTTGTT
i Diceros_bicornis.DicBicMic_scaffold_9545              I 11 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   159943 42 +    228994 TGC----ATG-AGT--TT----A---G----A--AAC-AT---------------C--AAAT---------CTGAAGT-T---------------C-CCT-G---------------T--GATT
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3660637 18 +   4240102 -----------------------------------------------------------------------CTAAGTG-C---------------C-ATT-G---------------T--GGCT
i Dipodomys_ordii.KN672545.1                            I 16 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  2991 18 -     11986 -----------------------------------------------------------------------CTAAGTG-C---------------C-ATT-G---------------T--GGCT
i Dipodomys_stephensi.DipSte_scaffold_84338             I 16 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                40894 42 -     73477 TGC----ATG-AGT--TT----A---G----A--AAC-AT---------------T--AAAT---------CTGAGTT-C---------------C-CCT-G---------------T--GACT
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           23000215 45 -  44670279 cat----ctg-aca--tt---gg---g----a--atc-aga--------------gtcacac---------caatgtt-c---------------t-act-g---------------t---tct
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1496539 45 +   1727528 -------gtg-aat--tt---ta---a----a--gtc-CAACAGCCAGAGTTCCAT--AAAC---------CAGAGTT-C--------------------------------------------
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 I 9
s Elephantulus_edwardii.JH947210.1                        7834492 31 +  15467074 --------------------------G----A--TTC-ACA--------------T--AAAC---------CTTAAGT-C---------------C-AGA-C---------------T--GGTT
i Elephantulus_edwardii.JH947210.1                      I 12 C 0
s Ellobius_lutescens.LOEQ01003611.1                        244120 43 -    369425 TAC----ATG-AGT--AT----A---G----G--ATC-ATA--------------C--CTAT---------CTTAATG-C---------------C-ACT-G---------------T--GGTT
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Enhydra_lutris.KZ291749.1                              85877788 32 +  99434291 gat----gtg-act--tt---ta---g----a--gtc-tga--------------c--aagc---------ctgaga-----------------------------------------------
i Enhydra_lutris.KZ291749.1                             C 0 I 12
s Eptesicus_fuscus.JH977687.1                             4709275 44 +   6522550 CAT----TTG-ACT--TT---TG---A----A--GTC-TGA--------------C--AAAC---------TTGAATT-T---------------T-ACT-G---------------T--GGTT
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5856683 23 -   7175178 --------------------------------------------------------------------------------------------------caaacctgagttccac---cgtcatt
i Equus_asinus.JREZ01000062.1                           I 33 C 0
s Equus_caballus.CM000402.2                              13355169 23 +  41866177 --------------------------------------------------------------------------------------------------caaacctgagttccac---cgtcatt
i Equus_caballus.CM000402.2                             I 19 C 0
s Equus_przewalskii.ATBW01073585.1                          16659 23 +     92910 --------------------------------------------------------------------------------------------------caaacctgagttccac---cgtcatt
i Equus_przewalskii.ATBW01073585.1                      I 19 C 0
s Erinaceus_europaeus.JH835290.1                         11541627  5 +  16010500 ---------------------------------------------------------------------------------------------------------------------t--gatt
i Erinaceus_europaeus.JH835290.1                        I 40 C 0
s Erythrocebus_patas.Contig8                             48781151 42 -  48907691 aat----gtg-aat--tt----g---g----a--atc-aga--------------c--aaac----------tgagtt-t---------------c-acc-a---------------t--ggtt
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          319173 59 +    330699 CAT----GTG-ACT--TG---TT---G----A--GCC-TGA--------------C--AAAC---------CTGAGTT-C---------------C-ACAAACCTGACTTCCACTG-T--GGTT
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             65630 59 +     89355 CAT----GTG-ACT--TG---TT---G----A--GCC-TGA--------------C--AAAC---------CTGAGTT-C---------------C-ACAAACCTGACTTCCACTG-T--GGTT
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_59549                                684 43 +      1101 CAC----GTG-ATT--TT----G---G----A--ATC-ACA--------------C--AAAC---------CTGAGTT-C---------------T-ACC-A---------------T--GGTT
i Eulemur_albifrons.k141_59549                          I 9 I 5
s Eulemur_collaris.k141_1015201                              2851 43 -      4292 CAC----GTG-ATT--TT----G---G----A--ATC-ACA--------------C--AAAC---------CTGAGTT-C---------------T-ACC-A---------------T--GGTT
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            15988 43 +     36558 CAC----ATG-ATT--TT----G---G----A--ATC-ACA--------------C--AAAC---------CTGAGTT-C---------------T-ACC-A---------------T--GGTT
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            12310 43 +     60246 cac----gtg-att--tt----g---g----a--atc-aca--------------c--aaac---------ctgagtt-c---------------t-acc-a---------------t--ggtt
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                15795 43 +    109717 cac----gtg-att--tg----g---g----a--atc-aca--------------c--aaac---------ctgagtt-c---------------t-acc-a---------------t--ggtt
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 3778 43 -     19505 CAC----GTG-ATT--TT----G---G----A--ATC-ACA--------------C--AAAC---------CTGAGTT-C---------------T-ACC-A---------------T--GGTT
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                20453 43 +     27497 CAC----GTG-ATT--TG----G---G----A--ATC-ACA--------------C--AAAC---------CTGAGTT-C---------------T-ACC-A---------------T--GGTT
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           22909 43 +     26808 CAC----GTG-ATT--TT----G---G----A--ATC-ACA--------------C--AAAC---------CTGAGTT-C---------------T-ACC-A---------------T--GGTT
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                37641 43 +     46535 CAC----GTG-ATT--TT----G---G----A--ATC-ACA--------------C--AAAC---------CTGAGTT-C---------------T-ACC-A---------------T--GGTT
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              20382 43 -     29447 CAC----GTG-ATT--TG----G---G----A--ATC-ACA--------------C--AAAC---------CTGAGTT-C---------------T-ACC-A---------------T--GGTT
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129899255 32 - 159252932 cat----gtg-aac--tt---tg---g----a--tta-tga--------------c--agcc---------ctgagt-----------------------------------------------
i Felis_catus.CM001386.2                                C 0 I 12
s Felis_catus_fca126.CM031420.1                         129286230 32 - 158578461 cat----gtg-aac--tt---tg---g----a--tta-tga--------------c--agcc---------ctgagt-----------------------------------------------
i Felis_catus_fca126.CM031420.1                         C 0 I 12
s Felis_nigripes.FelNig_flattened_line_8080                 27329 32 +     52776 cat----gtg-aac--tt---tg---g----a--tta-tga--------------c--agcc---------ctgagt-----------------------------------------------
i Felis_nigripes.FelNig_flattened_line_8080             C 0 I 12
s Fukomys_damarensis.KN123630.1                          13896463 42 -  19261668 CAC----GTG-AGT--TT----G---G----A--ATC-AT---------------C--AAAT---------CTGATTT-C---------------C-ATT-C---------------T--GATT
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     215642 32 -    847004 CAC----ATG-ATT--TT----G---G----A--ATC-ACA--------------C--AAAT---------CTGaggt----------------------------------------------
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           18003 32 -     43889 CAC----ATG-ATT--TT----G---G----A--ATC-ACA--------------C--AAAT---------CTGaggt----------------------------------------------
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          15147 32 +     27357 CAC----ATG-ATT--TT----G---G----A--ATC-ACA--------------C--AAAT---------CTGaggt----------------------------------------------
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               159912 21 +    324696 -----------------------------------------------------------aac---------ttgagtt-c---------------c-aca-a---------------t--ggtt
i Galeopterus_variegatus.GalVar_scaffold_354            I 18 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    186316 45 -    189561 -------GGG-AAT--TT---TA---G----A--GTC-CAACAGCCAGAGTTCCAC--AAAC---------CAGATTT-C--------------------------------------------
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 I 9
s Glis_glis.GliGli_scaffold_79770                           16783 44 -     18683 CAT----GTA-AAT--TT----G---G----A--ATC-AGA--------------C-TGAAT---------TAGAGTT-C---------------C-ACT-G---------------T--AGGT
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_2641970                               550 43 +      9263 cac----gtg-act--tt----g---a----a--atc-agc--------------c--aaac---------ctgagtt-c---------------c-acc-a---------------t--gctt
i Gorilla_beringei.k141_2641970                         C 0 I 5
s Gorilla_gorilla.LT578340.1                             52344643 43 + 195582420 cac----gtg-act--tt----g---a----a--atc-agc--------------c--aaac---------ctgagtt-c---------------c-acc-a---------------t--gctt
i Gorilla_gorilla.LT578340.1                            C 0 I 5
s Graphiurus_murinus.GraMur_scaffold_4493                   80100 43 +    118900 cat----gtg-tat--tt----g---a----a--atc-a-a--------------ct-aaat---------cagagtt-c---------------c-act-t---------------t--gggt
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         6377 43 +     10286 cat----gtg-att--tt----a---g----a--atc-aca--------------c--aaac---------ctgagtt-c---------------t-acc-a---------------t--ggtt
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             4855 43 -     11661 cat----gtg-att--tt----a---g----a--atc-aca--------------c--aaac---------ctgagtt-c---------------t-acc-a---------------t--ggtt
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                            10182 43 +     56096 cac----gtg-att--tt----a---g----a--atc-aca--------------c--aaac---------ctgagtt-c---------------t-acc-a---------------t--ggtt
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        33431 43 -     42470 cat----gtg-att--tt----a---g----a--atc-aca--------------c--aaac---------ctgagtt-c---------------t-acc-a---------------t--ggtt
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        50054 43 -     54384 cat----gtg-att--tt----a---g----a--atc-aca--------------c--aaac---------ctgagtt-c---------------t-acc-a---------------t--ggtt
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              22954 32 +     53719 cat----gtg-acc--tt---tg---g----a--ttt-aga--------------t--aagc---------ctgagt-----------------------------------------------
i Helogale_parvula.HelPar_flattened_line_22962          C 0 I 12
s Hemitragus_hylocrius.HemHyl_scaffold_16669                33208 45 -     91191 -------GTG-AAT--TT---TA---G----A--GTC-CAACAGCCAGAGTTCCAC--AAAC---------CAGAGTT-C--------------------------------------------
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 I 9
s Heterocephalus_glaber.JH602058.1                        2560955 42 +  31725842 CCC----GTG-AGT--TT----G---G----A--ATC-AT---------------C--AAAT---------CTGAGTT-C---------------C-ACT-G---------------T--GACT
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               63197 25 +     73687 ---------------------------------------ga--------------c--aaac---------cggagct-c---------------c-acc-c---------------a--agtt
i Heterohyrax_brucei.HetBruBak_scaffold_25354           I 15 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              150963 59 +    277961 CGT----GTG-ACT--TG---TT---G----A--GTC-TGA--------------C--AAAC---------TTGAGTT-C---------------C-ACAAACCTGACTCCTGTTG-T--GGTT
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      283366 45 -    477199 cat----gtg-act--tc---tg---a----a--gtcttga--------------c--aacc---------ctgagtt-c---------------t-cct-g---------------t--ggtt
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_7653                5916 45 +     86108 tgt----gtg-act--tt---tg---g----a--gtcttga--------------c--aacc---------ctgaatt-c---------------t-act-c---------------t--ggtt
i Hipposideros_galeritus.HipGal_scaffold_7653           C 0 I 44
s Hoolock_leuconedys.ctg649                                   109224 43 +    115816 GAT----GTG-AAT--TT----G---G----A--ATC-AGA--------------C--AAAC---------CTGAGTT-C---------------C-ACC-A---------------C--GCTT
i Hoolock_leuconedys.ctg649                                C 0 I 282
s Hyaena_hyaena.HyaHya_flattened_line_20729                 23425 32 -     67322 CAT----GTG-ACT--TT---CA---G----A--TTA-TGA--------------C--AAGC---------CTGAAT-----------------------------------------------
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 I 12
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           21563 42 -    119109 TGC----GTG-AGT--TT----A---G----A--AAC-AT---------------C--AAAT---------CTGAGTT-C---------------C-CCT-G---------------T--GAAC
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_1816750                             2052 43 +      3202 GAT----GTG-AAT--TT----G---G----A--ATC-AGA--------------C--AAAC---------CTGAGTT-C---------------C-ACC-A---------------C--GCTT
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1633646                              2022 43 -      2102 GAT----GTG-AAT--TT----G---G----A--ATC-AGA--------------C--AAAC---------CTGAGTT-C---------------C-ACC-A---------------C--GCTT
i Hylobates_agilis.k141_1633646                         C 0 C 0
s Hylobates_klossii.k141_468230                              3540 44 +      5464 GAT----GTG-AAT--TT---TG---G----A--ATC-AGA--------------C--AAAC---------CTGAGTT-C---------------C-ACC-A---------------C--GCTT
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14628887 43 -  25970782 GAT----GTG-AAT--TT----G---G----A--ATC-AGA--------------C--AAAC---------CTGAGTT-C---------------C-ACC-A---------------C--GCTT
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            1439 43 +      4161 GAT----GTG-AAT--TT----G---G----A--ATC-AGA--------------C--AAAC---------CTGAGTT-C---------------C-ACC-A---------------C--GCTT
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             37749 43 -     60944 GAT----GTG-AAT--TT----G---G----A--ATC-AGA--------------C--AAAC---------CTGAGTT-C---------------C-ACC-A---------------T--GCTT
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     9858 42 +     22540 CAC----ATA-AAT--TT----G---G----A--ATC-GT---------------C--AAAC---------CTGAGTT-C---------------C-ACT-G---------------T--GATT
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7130690 44 +  13083262 cat----gtg-cat--tt----g---g----a--atc-aga--------------c--aaat---------atgaatt-c---------------caact-g---------------t--ggtt
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   1900 43 +      3484 cac----ata-att--tt----g---g----a--atc-aca--------------c--aaac---------ctgagtt-c---------------c-atc-a---------------t--ggtt
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              13161 59 +     17520 CAT----GTG-ACT--TG---TT---G----A--GCC-TGA--------------C--AAAC---------CTGAGTT-C---------------C-ACAAACCTGGCTTCCACTG-T--GGTC
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8578176 43 +  11848649 cac----TTG-AGT--TT----T---G----A--ATC-AAA--------------T--CAAT---------CTAAGAC-T---------------T-ACT-G---------------T--AGTT
i Jaculus_jaculus.JH725517.1                            C 0 I 8
s Kogia_breviceps.KogBre_flattened_line_35920               27780 59 +     37189 CAT----GTG-ACT--TG---TT---G----A--GCC-TGA--------------G--AAAC---------CTGAGTT-C---------------C-ACGAACCTGACTTCCACTG-T--GGTC
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          54335 43 -    147782 GAT----GTG-AAT--TT----A---G----A--ATC-AGA--------------C--AAAC---------CTGAGTT-C---------------C-ACC-A---------------T--GCTT
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    5872 33 +     26176 -AT----TTC-ACT--TT---TG---A----A--GTC-TGA--------------T--AAAC---------TTGAGTT-T--------------------------------------------
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 I 9
s Lemur_catta.scaffold_1                                258411729 43 - 285822530 cat----gtg-att--tt----g---g----a--atc-aca--------------c--aaac---------ctgagtt-c---------------t-acc-a---------------t--ggtt
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        29038 43 +     39228 CAC----TTG-ATT--TT----G---G----A--ATC-ACA--------------C--AAAC---------CTGAGTT-C---------------T-ACC-A---------------T--GCTT
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            58402 43 +     63517 CAC----TTG-ATT--TT----G---G----A--ATC-ACA--------------C--AAAC---------CTGAGTT-C---------------T-ACC-A---------------T--GCTT
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        36782 43 -     38897 CAC----TTG-ATT--TT----G---G----A--ATC-ACA--------------C--AAAC---------CTGAGTT-C---------------T-GCC-A---------------T--GCTT
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      2828 43 -     13103 CAC----TTG-ATT--TT----G---G----A--ATC-ACA--------------C--AAAC---------CTGAGTT-C---------------T-ACC-A---------------T--GCTT
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3091765 32 -   3498232 cat----gtg-act--tt---tg---g----a--gtc-taa--------------c--aaac---------ctgagt-----------------------------------------------
i Leptonychotes_weddellii.KB714749.1                    C 0 I 12
s Lepus_americanus.LepAme_scaffold_62849                    21204 20 +     22452 ------------------------------------------------------------AT---------TTAGGTT-C---------------C-AAT-G---------------T--GGTT
i Lepus_americanus.LepAme_scaffold_62849                I 18 C 0
s Lipotes_vexillifer.KE558548.1                            140095 59 +   3060487 cat----gtg-act--tg---tt---g----a--gcc-tga--------------c--aaac---------ctgagtt-c---------------c-acaaacctgacttccactg-t--ggtc
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19252772 42 +  19376315 AAT----GTG-AAt--tt----g---g----a--atc-aga--------------c--aaac----------tgagtt-c---------------c-acc-a---------------t--gatt
i Lophocebus_aterrimus.ctg55                            I 4 C 0
s Loris_lydekkerianus.k141_550999                           15605 32 +     84689 CAC----ATG-ATT--TT----G---G----A--ATC-ACA--------------C--AAAT---------CTGaggt----------------------------------------------
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3783343 32 +   6799190 CAC----ATG-ATT--TT----G---G----A--ATC-ACA--------------C--AAAT---------CTGaggt----------------------------------------------
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20599102 44 -  62548349 cac----ctg-act--tt---ta---g----a--gtc-aga--------------c--aaac---------ctaaatt-c---------------c-acc-a---------------t--ggtt
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11095525 32 +  39895028 CAT----GAG-ACT--TT---TG---A----A--GTC-TGC--------------C--AAGC---------CTGAGT-----------------------------------------------
i Lycaon_pictus.CM007556.1                              C 0 I 12
s Macaca_arctoides.k141_2201161                             24523 42 +     74745 AAT----GTG-AAT--TT----G---G----A--ATC-AGA--------------C--AAAC----------TGAGTT-C---------------C-ACC-A---------------T--GGTT
i Macaca_arctoides.k141_2201161                         I 32 C 0
s Macaca_assamensis.Contig65                             12710984 42 +  12821369 AAT----GTG-AAT--TT----G---G----A--ATC-AGA--------------C--AAAC----------TGAGTT-C---------------C-ACC-A---------------T--GGTT
i Macaca_assamensis.Contig65                            I 32 C 0
s Macaca_cyclopis.k119_883699                                3557 42 -     26467 AAT----GTG-AAT--TT----G---G----A--ATC-AGA--------------C--AAAC----------TGAGTT-C---------------C-ACC-A---------------T--GGTT
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           51428 42 +     63263 AAT----GTG-AAT--TT----G---G----A--ATC-AGA--------------C--AAAC----------TGAGTT-C---------------C-ACC-A---------------T--GGTT
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 3538 42 -     26361 AAT----GTG-AAT--TT----G---G----A--ATC-AGA--------------C--AAAC----------TGAGTT-C---------------C-ACC-A---------------T--GGTT
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 6728 42 -      7381 AAT----GTG-AAT--TT----G---G----A--ATC-AGA--------------C--AAAC----------TGAGTT-C---------------C-ACC-A---------------T--GGTT
i Macaca_leonina.k141_467472                            I 32 C 0
s Macaca_maura.k141_251854                                  49957 42 -     79256 AAT----GTG-AAT--TT----G---G----A--ATC-AGA--------------C--AAAC----------TGAGTT-C---------------C-ACC-A---------------T--GGTT
i Macaca_maura.k141_251854                              I 32 C 0
s Macaca_mulatta.NC_041755.1                            196040055 42 + 196197964 AAT----GTG-AAT--TT----G---G----A--ATC-AGA--------------C--AAAC----------TGAGTT-C---------------C-ACC-A---------------T--GGTT
i Macaca_mulatta.NC_041755.1                            N 0 C 0
s Macaca_nemestrina.KQ004885.1                           11450225 42 +  11645122 AAT----GTG-AAT--TT----G---G----A--ATC-AGA--------------C--AAAC----------TGAGTT-C---------------C-ACC-A---------------T--GGTT
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   8911 42 -     46448 AAT----GTG-AAT--TT----G---G----A--ATC-AGA--------------C--AAAC----------TGAGTT-C---------------C-ACC-A---------------T--GGTT
i Macaca_nigra.k141_282495                              I 32 C 0
s Macaca_radiata.k141_3680256                                6574 42 -     13212 AAT----GTG-AAT--TT----G---G----A--ATC-AGA--------------C--AAAC----------TGAGTT-C---------------C-ACC-A---------------T--GGTT
i Macaca_radiata.k141_3680256                           I 32 C 0
s Macaca_siberu.k141_741907                                 20254 42 -     55006 AAT----GTG-AAT--TT----G---G----A--ATC-AGA--------------C--AAAC----------TGAGTT-C---------------C-ACC-A---------------T--GGTT
i Macaca_siberu.k141_741907                             I 32 C 0
s Macaca_silenus.Contig12                                43845369 42 +  43892939 AAT----GTG-AAT--TT----G---G----A--ATC-AGA--------------C--AAAC----------TGAGTT-C---------------C-ACC-A---------------T--GGTT
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               21538 42 -     24607 AAT----GTG-AAT--TT----G---G----A--ATC-AGA--------------C--AAAC----------TGAGTT-C---------------C-ACC-A---------------T--GGTT
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               8908 42 -     27140 AAT----GTG-AAT--TT----G---G----A--ATC-AGA--------------C--AAAC----------TGAGTT-C---------------C-ACC-A---------------T--GGTT
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43441944 42 -  43563597 aat----gtg-aat--tt----g---g----a--atc-aga--------------c--aaac----------tgagtt-c---------------c-acc-a---------------t--gatt
i Mandrillus_leucophaeus.scaffold125                    I 32 C 0
s Mandrillus_sphinx.Contig144                             4454748 42 -   4543643 aat----gtg-aat--tt----g---g----a--atc-aga--------------c--aaac----------tgagtt-c---------------c-acc-a---------------t--gatt
i Mandrillus_sphinx.Contig144                           I 32 C 0
s Manis_javanica.JSZB01003966.1                            152481 59 +    252755 CAT----GTG-ACT--TT---CA---G----A--GTC-TGA--------------G--ACAC---------CGGAGTTCT---------------A-ACA-A--CTTGAGTTTTAC-TGTGGTT
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             40075 59 +     58827 CAT----GTG-ACT--TT---CA---G----A--GTC-TGA--------------G--AAAC---------CGGAGTTCT---------------A-ACA-A--CTTGAGTTTTAC-TGTGGTT
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36878559 44 +  64221397 cat----gtg-cat--tt----g---g----a--atc-aga--------------c--aaat---------atgaatt-c---------------caact-g---------------t--gatt
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       65917 44 -    234502 cac----gtg-gct--tt---tg---a----a--gcc-tca--------------c--aaac---------ctgagtt-c---------------t-gct-g---------------t--cgtt
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             6891 32 -     87323 GAT----GTG-ACT--TT---TA---G----A--GTC-TGA--------------C--AAGC---------CTGAGA-----------------------------------------------
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 I 12
s Meriones_unguiculatus.MerUng_scaffold_9483                 1573 43 +    115071 CAC----ATG-AGT--TT----G---G----A--ATC-ACA--------------G--CAAT---------ATTTACT-C---------------C-ACT-A---------------T--GGCT
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1051843 42 -  26018355 CAC-----TG-AGT--AT----G---G----A--ATC-AGC--------------C--CAAT---------CTTAGTT-C---------------C-ACT-G---------------T--AGTT
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    2752 59 -     12939 CAT----GTG-ACT--TG---TT---G----A--GCC-TGA--------------C--AAAC---------CTGACTT-C---------------C-ACAAACCTGACTTCCACTG-T--GGTC
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16514758 42 +  47401472 CAT----GTG-ATT--TT----G---G----A--ATC-ACA--------------C--AAAC---------CTGAGTT-C---------------C-ACC-A---------------T--GG-T
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  41782 46 -     48017 cgt----ctg-gca--tt---gggggg----a--gtc-agt--------------a--ccac---------caaagtt-c---------------t-aat-g---------------t---tct
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               25270 44 -     32043 CAT----TTG-ACT--TC---TG---G----A--GTC-TGA--------------C--AAAC---------TTGAGTT-C---------------T-ACT-G---------------T--GGTT
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22824917 43 -  98408828 TAC----ATT-AGT--AT----A---G----G--ATC-ATA--------------C--TGAT---------CTTAATG-C---------------C-ACT-G---------------T--GGTT
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8213325 42 +  10048721 cat----ttg-act--tt---tg---g----a--gtc-tga--------------c--aaac-----------gagtt-a---------------t-act-g---------------t--ggtt
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            37814 44 +     45743 cat----ttg-act--tt---tg---g----a--gtc-tga--------------c--aaac---------ttgagtt-a---------------t-act-g---------------t--ggtt
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         6490 42 +     29742 aat----gtg-aat--tt----g---g----a--atc-aga--------------c--aaac----------tgagtt-c---------------c-acc-a---------------t--ggtt
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        17261 32 -    104932 cat----gtg-act--tt---tg---g----a--gtc-taa--------------c--aaac---------ctgagt-----------------------------------------------
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 I 12
s Mirza_zaza.k141_593947                                     5442 42 -     12809 cat----gtg-att--tt----g---g----a--atc-aca--------------c--aaac---------ctgagtt-c---------------t-acc-a---------------t--gg-t
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 150542 59 +    154973 cat----gtg-act--tg---tt---g----a--gcc-tga--------------c--aaac---------ctgagtt-c---------------c-acaaacctgacttccactg-t--ggtc
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                163801 44 +    265003 cac----ttg-act--tt---tg---g----a--gtc-tta--------------c--aaac---------ttcagtt-c---------------t-act-g---------------t--ggtt
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  6557 45 -     19904 -------GTG-AAT--TT---TA---G----A--GTC-CAACAGCCAGAGTTCCAC--AAAC---------CAGAGTT-C--------------------------------------------
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 I 9
s Mungos_mungo.MunMun_flattened_line_8729                  150629 32 -    168139 cat----gtg-acc--tt---tg---g----a--ttt-aga--------------c--tagc---------ctgagt-----------------------------------------------
i Mungos_mungo.MunMun_flattened_line_8729               C 0 I 12
s Murina_feae.MurFea_scaffold_2254                          24732 43 -    100666 CAT-----TG-AGT--TT---TG---A----A--GTC-TGA--------------C--AAAC---------TTGAGTT-T---------------T-ACT-G---------------T--GGTT
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70772148 43 +  92629107 CCC----AGA-TGT--TT----G---G----A--ATG-ACA--------------C--CAGT---------CTTAATT-C---------------C-ACT-G---------------T--GTTT
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75494202 43 +  98207768 CCC----AGA-AGT--TT----G---G----G--ATG-ACA--------------C--CAGT---------CTTAGTT-C---------------C-ACT-G---------------T--GGTT
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67560954 43 +  89017189 CCC----AGA-AGT--TT----T---G----A--ATG-ACA--------------C--CAGT---------CTTAGTT-C---------------C-ACT-G---------------T--GGTT
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74336928 43 +  97876770 CTC----AGA-AGT--TT----G---G----G--ATG-ACA--------------C--CAGT---------CTTAGTT-C---------------C-ACT-G---------------T--GGTT
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             15188 44 +     98495 TAT----GTA-AAt--tt----g---g----a--att-aga--------------c-caaat---------cagaatt-c---------------t-act-c---------------t--gggt
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4428997 32 -  28371801 gat----gtg-act--tt---ta---g----a--gtc-tga--------------c--aagc---------ctgaga-----------------------------------------------
i Mustela_putorius.JH417978.1                           C 0 I 12
s Myocastor_coypus.MyoCoy_scaffold_3653                     94158 42 -    117718 AGT----AGG-AGT--TT----G---G----A--AAC-AA---------------C--AAAT---------CTGAATA-C---------------C-CCT-G---------------T--GATT
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               971610 44 +   8389877 cat----ttg-act--tt---tg---a----a--gtc-tga--------------c--aaac---------ttgagtt-t---------------t-act-g---------------t--ggtt
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5023030 44 +   6462685 cat----ttg-act--tt---ta---a----a--gtc-tga--------------c--aaac---------ttgagtt-t---------------a-att-g---------------t--ggtt
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3469114 44 -   3747815 cat----ttg-act--tt---tg---a----a--gtc-tga--------------c--aaac---------ttgagtt-t---------------t-act-g---------------t--ggtt
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        14355 44 +     66751 cat----ttg-act--tt---tg---a----a--gtc-tga--------------c--aaac---------ttgagtt-t---------------t-act-g---------------t--ggtt
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             7970 44 -      8794 CCC----TTG-ATT--TT---TG---G----A--CTC-AGA--------------T--AAAC---------CTGAGTT-A---------------C-ACT-T---------------T--TGTC
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            240933 43 -    362372 CAA----ATG-AAT--CT----G---G----A--ACC-AGC--------------C--CAAT---------CTAAGTT-C---------------C-ACT-G---------------T--GGTT
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_1382660                              4141 43 +      5784 cac----gtg-act--tt----g---a----a--atc-agc--------------c--gaac---------ctgagtt-c---------------c-acc-a---------------c--actt
i Nasalis_larvatus.k141_1382660                         C 0 I 5
s Neomonachus_schauinslandi.NINY01007774.1                4490659 32 -  14209539 cat----gtg-act--tt---tg---g----a--gtc-taa--------------c--aaac---------ctgagt-----------------------------------------------
i Neomonachus_schauinslandi.NINY01007774.1              C 0 I 12
s Neophocaena_asiaeorientalis.KZ688543.1                  3955133 59 -   4490290 cat----atg-aat--tg---tt---g----a--gcc-tga--------------c--aaac---------ctgagtt-c---------------c-acaaacctgacttccactg-t--ggtc
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  50869 44 +     94413 cat----ttg-act--tt---tg---g----a--gtc-tga--------------c--aaac---------ttgagct-c---------------t-act-g---------------t--ggtg
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_762468                             558 43 -      2755 gat----gtg-aat--tt----g---g----a--atc-aga--------------c--aaac---------ctgagtt-c---------------c-acc-a---------------c--gctt
i Nomascus_annamensis.k141_762468                       C 0 C 0
s Nomascus_concolor.k141_256540                              7170 43 -      8966 gat----gtg-aat--tt----g---g----a--atc-aga--------------c--aaac---------ctgagtt-c---------------c-acc-a---------------c--gctt
i Nomascus_concolor.k141_256540                         I 9 I 75
s Nomascus_gabriellae.k141_1400361                           1109 43 -      2203 gat----gtg-aat--tt----g---g----a--atc-aga--------------c--aaac---------ctgagtt-c---------------c-acc-a---------------c--gctt
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_453                             6421 43 +     12787 gat----gtg-aat--tt----g---g----a--atc-aga--------------c--aaac---------ctgagtt-c---------------c-acc-a---------------c--gctt
i Nomascus_siki_b.tarseq_453                        I 9 I 75
s Nomascus_siki_a.k141_421408                                  1023 43 +     16235 gat----gtg-aat--tt----g---g----a--atc-aga--------------c--aaac---------ctgagtt-c---------------c-acc-a---------------c--gctt
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                38390 32 +   3668941 cat----GAG-ACT--TT---TG---A----A--GTC-TGC--------------C--AAGC---------CTGAGC-----------------------------------------------
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 I 12
s Nycticebus_bengalensis.LG16                            65572268 32 -  95554990 CAC----ATG-ATT--TT----G---G----A--ATC-ACA--------------C--AAAT---------CTGaggt----------------------------------------------
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_771591                            15678 32 +     16181 CAC----ATG-ATT--TT----G---G----A--ATC-ACA--------------C--AAAT---------CTGAGGT----------------------------------------------
i Nycticebus_coucang.k141_771591                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65680456 32 +  89412551 CAC----ATG-ATT--TT----G---G----A--ATC-ACA--------------C--AAAT---------CTGaggt----------------------------------------------
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            5000226 43 -  23139505 CCT----TTG-AAC--TT----G---G----A--ATT-ACA--------------G--TGCT---------TTGAATG-C---------------C-ACC-G---------------T--AGTT
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3689647 41 +  10294119 T-T----ATA-ACT--TT----G---G----A--AAT-AT---------------C--AAAT---------CTGAAtt-c---------------c-tct-g---------------t--gatt
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             685363 32 -   3126709 cat----gtg-act--tt---tg---g----a--gtc-taa--------------c--aaac---------ctgagt-----------------------------------------------
i Odobenus_rosmarus.KB229369.1                          C 0 I 12
s Odocoileus_virginianus.KZ101650.1                       1083987 45 +   1425656 -------gtg-aat--tt---ta---a----a--gtc-CAACAGCCAGAGTTCCAC--AAAC---------CAGAGTT-C--------------------------------------------
i Odocoileus_virginianus.KZ101650.1                     C 0 I 9
s Okapia_johnstoni.LVCL01S0017931.1                         42061 41 +     78940 ------------AT--TT---TA---G----A--GTC-CAACAGCCAGAGTTCCAC--AAAC---------CAGATTT-C--------------------------------------------
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 I 9
s Ondatra_zibethicus.OndZib_scaffold_6821                  130713 43 +    145789 TGC----ATG-AGT--AT----A---G----A--ATC-ATA--------------C--TGAT---------CTCAATG-C---------------C-ACT-G---------------T--GGTT
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  43413 43 +     62360 CAC----ATG-AGT--GT----G---G----A--ATC-ACA--------------T--CAAC---------ATTCATT-C---------------C-ACT-C---------------T--GGTT
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7228807 59 -   7562323 cat----gtg-act--tg---tt---g----a--gcc-tga--------------c--aaac---------ctgagtt-c---------------c-gcaaacctgacttccactg-t--ggtc
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              64511 44 -     66828 cac----atg-act--tt---tg---g----a--gtc-aga--------------g--aaac---------ctaagat-t---------------t-aat-g---------------t--ggtt
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141884221 20 + 163896628 ------------------------------------------------------------AT---------TTAGGTT-C---------------C-AAT-G---------------T--GGTT
i Oryctolagus_cuniculus.CM000803.1                      I 18 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      315528 32 -    505867 CAT----GAG-ACT--TT---TG---A----A--GTC-TGC--------------C--AAGC---------CTGAGT-----------------------------------------------
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 I 12
s Otolemur_crassicaudatus.k141_505435                        5504 32 -     53940 CAC----ATG-ATT--TT----G---G----A--ATC-ACA--------------C--AAAT---------CTGaggt----------------------------------------------
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18013473 32 -  38779656 CAC----ATG-ATT--TT----G---G----A--ATC-ACA--------------C--AAAT---------CTGAGGT----------------------------------------------
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134082994 45 - 275406953 -------gtg-aat--tt---ta---g----a--gtc-caacagccagagttccac--aaac---------cagagtt-c--------------------------------------------
i Ovis_aries.CM001582.2                                 C 0 I 9
s Ovis_canadensis.OviCan_scaffold_6251                      84228 45 +    140051 -------GTG-AAT--TT---TA---G----A--GTC-CAACAGCCAGAGTTCCAC--AAAC---------CAGAGTT-C--------------------------------------------
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 I 9
s Pan_paniscus.CM003386.1                               127578845 43 - 205426864 CAT----GTG-AAT--TT----G---G----A--ATC-AGA--------------C--AAAC---------CTGAGTT-C---------------C-ACC-A---------------T--GCTT
i Pan_paniscus.CM003386.1                               I 4 I 78
s Pan_troglodytes.CM009241.2                            120156005 43 - 196562556 CAT----GTG-AAT--TT----G---G----A--ATC-AGA--------------C--AAAC---------CTGAGTT-C---------------C-ACC-A---------------T--GCTT
i Pan_troglodytes.CM009241.2                            I 4 I 78
s Panthera_onca.PanOnc_flattened_line_1615                  40249 32 +    295523 cat----gtg-aac--tt---tg---g----a--tta-tga--------------c--agcc---------ctgagt-----------------------------------------------
i Panthera_onca.PanOnc_flattened_line_1615              C 0 I 12
s Panthera_pardus.KV860323.1                              3644064 32 +  18214204 cat----gtg-aac--tt---tg---g----a--tta-tga--------------c--agcc---------ctgagt-----------------------------------------------
i Panthera_pardus.KV860323.1                            C 0 I 12
s Panthera_tigris.KE721879.1                              5033712 32 -   6340057 cat----gtg-aac--tt---tg---g----a--tta-tga--------------c--agcc---------ctgagt-----------------------------------------------
i Panthera_tigris.KE721879.1                            C 0 I 12
s Pantholops_hodgsonii.KE114631.1                         1071865 45 -   1292953 -------GTG-AAT--TT---TT---G----A--GTC-CAACAGCCAAAGTTCCAC--AAAC---------CAGAGTT-A--------------------------------------------
i Pantholops_hodgsonii.KE114631.1                       C 0 I 9
s Papio_anubis.CM001492.2                               188160733 42 - 188283584 AAT----GTG-AAT--TT----G---G----A--ATC-AGA--------------C--AAAC----------TGAGTT-C---------------C-ACC-A---------------T--GATT
i Papio_anubis.CM001492.2                               N 0 C 0
s Papio_cynocephalus.k141_45376                              3823 42 +     25005 AAT----GTG-AAt--tt----g---g----a--atc-aga--------------c--aaac----------tgagtt-c---------------c-acc-a---------------t--gatt
i Papio_cynocephalus.k141_45376                         I 32 C 0
s Papio_hamadryas.Contig15                               47518105 42 +  47705337 AAT----GTG-AAt--tt----g---g----a--atc-aga--------------c--aaac----------tgagtt-c---------------c-acc-a---------------t--gatt
i Papio_hamadryas.Contig15                              I 32 C 0
s Papio_kindae.k141_5458022                                 72096 42 -    104429 AAT----GTG-AAt--tt----g---g----a--atc-aga--------------c--aaac----------tgagtt-c---------------c-acc-a---------------t--gatt
i Papio_kindae.k141_5458022                             I 32 C 0
s Papio_papio.k141_979496                                   10628 42 +     14967 AAT----GTG-AAt--tt----g---g----a--atc-aga--------------c--aaac----------tgagtt-c---------------c-acc-a---------------t--gatt
i Papio_papio.k141_979496                               I 4 C 0
s Papio_ursinus.k141_1345919                                 6493 42 -      7628 AAT----GTG-AAt--tt----g---g----a--atc-aga--------------c--aaac----------tgagtt-c---------------c-acc-a---------------t--gatt
i Papio_ursinus.k141_1345919                            I 4 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    121731 32 -    135482 CAT----GCG-ACT--TT---TG---G----G--TTA-TAA--------------C--AAGC---------CTGAGT-----------------------------------------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 I 12
s Perodicticus_ibeanus.k141_117958                          11168 32 -     23713 CAC----GTG-ATT--TT----G---G----A--ATC-ACA--------------C--AAAT---------CTGagat----------------------------------------------
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           12319 32 +     61070 CAC----GTG-ATT--TT----G---G----A--ATC-ACA--------------C--AAAT---------CTGagat----------------------------------------------
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       2592 43 +     49596 CAT----ATG-AGT--TT----G---G----A--ATC-AGA--------------T--CAAG---------CTAACTG-C---------------C-ACT-G---------------T--GATT
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4955777 43 -   8017169 CAC----ATG-AGA--AT----G---G----A--ATC-ACA--------------T--CAAC---------CTTAATT-C---------------C-ACT-A---------------T--GGTT
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              3274 59 +      8220 CAT----GTG-AAT--TG---TT---G----A--GCC-TGA--------------C--AAAC---------CTGAGTT-C---------------C-ACAAACCTGACTTCCACTG-T--GGTC
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Piliocolobus_badius.k141_512007                           29665 43 +     37672 cac----gtg-act--tt----g---a----a--atc-agc--------------c--gaac---------ctgagtt-c---------------c-acc-a---------------t--gctt
i Piliocolobus_badius.k141_512007                       C 0 I 5
s Piliocolobus_gordonorum.k141_736355                       29582 43 +     67079 cac----gtg-act--tt----g---a----a--atc-agc--------------c--gaac---------ctgagtt-c---------------c-acc-a---------------t--gctt
i Piliocolobus_gordonorum.k141_736355                   C 0 I 5
s Piliocolobus_kirkii.k141_451083                            4746 43 -     13367 CAC----GTG-ACT--TT----G---A----A--ATC-AGC--------------C--GAAC---------CTGAGTT-C---------------C-ACC-A---------------T--GCTT
i Piliocolobus_kirkii.k141_451083                       C 0 I 5
s Piliocolobus_tephrosceles.PDMG02000342.1                3428347 43 -   4356645 CAC----GTG-ACT--TT----G---A----A--ATC-AGC--------------C--GAAC---------CTGAGTT-C---------------C-ACC-a---------------t--gctt
i Piliocolobus_tephrosceles.PDMG02000342.1              C 0 I 5
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            99892 43 +    112873 CAT----TTG--CT--TT---TC---A----A--GTT-TGA--------------T--AAAC---------TTGAGTT-T---------------T-ACT-G---------------T--GGTT
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           9721 74 +     21690 CAT----GTG-ACT--TT---CT---G----A--GCC-TGA--------------C--AAAC---------CTGAGTT-CCACAAACCTGACTTCC-ACAAACCTGACTTCCACTG-T--GGTC
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       26427 42 +     44506 GAT----GTG-AAT--TT----A---G----A--ATC-AGA--------------C--AAAC---------CTGA-TT-C---------------C-ACC-A---------------T--GCTT
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        26640 42 +     67491 GAT----GTG-AAT--TT----A---G----A--ATC-AGA--------------C--AAAC---------CTGA-TT-C---------------C-ACC-A---------------T--GCTT
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      16879 42 -     98129 GAT----GTG-AAT--TT----A---G----A--ATC-AGA--------------C--AAAC---------CTGA-TT-C---------------C-ACC-A---------------T--GCTT
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     26480 42 +    147771 GAT----GTG-AAT--TT----A---G----A--ATC-AGA--------------C--AAAC---------CTGA-TT-C---------------C-ACC-A---------------T--GCTT
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         3115 42 -     43940 GAT----GTG-AAT--TT----A---G----A--ATC-AGA--------------C--AAAC---------CTGA-TT-C---------------C-ACC-A---------------T--GCTT
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          7198 42 -     55515 GAT----GTG-AAT--TT----A---G----A--ATC-AGA--------------C--AAAC---------CTGA-TT-C---------------C-ACC-A---------------T--GCTT
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         26552 42 +    152463 GAT----GTG-AAT--TT----A---G----A--ATC-AGA--------------C--AAAC---------CTGA-TT-C---------------C-ACC-A---------------T--GCTT
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       4360 42 -    119457 GAT----GTG-AAT--TT----A---G----A--ATC-AGA--------------C--AAAC---------CTGA-TT-C---------------C-ACC-A---------------T--GCTT
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         16274 42 +    134592 GAT----GTG-AAT--TT----A---G----A--ATC-AGA--------------C--AAAC---------CTGA-TT-C---------------C-ACC-A---------------T--GCTT
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          26862 42 -     75465 GAT----GTG-AAT--TT----A---G----A--ATC-AGA--------------C--AAAC---------CTGA-TT-C---------------C-ACC-A---------------T--GCTT
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              191476 43 -    373494 GAT----GTG-AAT--TT----G---G----A--ATC-AGA--------------C--AAAC---------CTGAGTT-C---------------C-ACC-A---------------T--GCTT
i Pongo_abelii.NDHI03003816.1                           I 4 I 75
s Pongo_pygmaeus.ctg62                                   19812123 43 +  19899266 gat----gtg-aat--tt----g---g----a--atc-aga--------------c--aaac---------ctgagtt-c---------------c-acc-a---------------t--gctt
i Pongo_pygmaeus.ctg62                                  I 4 I 75
s Presbytis_comata.k141_678168                              10872 43 +     11126 CAC----GTG-ACT--TT----G---A----A--ATC-AGC--------------C--AAAC---------CTGAGTT-C---------------C-ACC-A---------------C--ACTT
i Presbytis_comata.k141_678168                          C 0 I 5
s Presbytis_mitrata.k141_1767317                            10861 43 +     15869 CAC----GTG-ACT--TT----G---A----A--ATC-AGC--------------C--AAAC---------CTGAGTT-C---------------C-ACC-A---------------C--ACTT
i Presbytis_mitrata.k141_1767317                        C 0 I 5
s Procavia_capensis.ProCapCap_scaffold_149274                4303 25 -      9567 ---------------------------------------GA--------------C--AAAC---------CGGAGCT-C---------------C-ACC-C---------------A--AGTT
i Procavia_capensis.ProCapCap_scaffold_149274           I 15 C 0
s Prolemur_simus.MPIZ01000048.1                           6853103 43 +  12164890 CAT----GTG-ATT--TT----G---G----A--ATC-ACA--------------C--AAAC---------CTGAGTT-C---------------T-ACC-A---------------T--GGTT
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     21910 43 -     30946 NNN----NNN-NNN--NN----N---N----N--NNN-NNN--------------N--NNNN---------NNNNNNN-N---------------N-NNN-N---------------N--NNNN
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         8187 43 +     11805 CAT----GTG-ATT--TT----G---G----A--ATC-ACA--------------C--AAAC---------CTGAGTT-C---------------C-ATC-A---------------T--GGTT
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           47521 43 +     52369 CAC----GTG-ATT--TT----G---G----A--ATC-ACA--------------C--AAAC---------TTGAGTT-C---------------C-ATC-A---------------T--GGTT
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         39908 43 -     44753 cac----gtg-att--tt----g---g----a--atc-aca--------------c--aaac---------ctgagtt-c---------------c-atc-a---------------t--ggtt
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            21831 43 +     27322 CAC----GTG-ATT--TT----G---G----A--ATC-ACA--------------C--AAAT---------CTGAGTT-C---------------C-ATC-A---------------T--GGTT
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       21480 43 -     53241 CAT----GTG-ATT--TT----G---G----A--ATC-ACA--------------C--AAAC---------CTGAGTT-C---------------C-ATC-A---------------C--GGTT
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         43743 43 -     48185 CAT----GTG-ATT--TT----G---G----A--ATC-ACA--------------C--AAAC---------CTGAGTT-C---------------C-ATC-A---------------T--GGTT
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           38568 43 +     77221 CAC----ATG-AGT--TT----G---G----A--ATC-ACA--------------C--GAAT---------ATTTACT-C---------------C-ACA-A---------------T--GGCT
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            6449 43 -     27784 cat----ttg-act--t----tg---a----a--gta-tga--------------c--aaac---------ttgagtt-t---------------t-act-g---------------t--gttt
i Pteronotus_parnellii.KE867983.1                       C 0 I 3
s Pteronura_brasiliensis.PteBra_flattened_line_1343        250644 32 -    344369 GAT----GTG-ACT--TT---TA---G----A--GTC-TGA--------------C--AAGC---------CTGAGA-----------------------------------------------
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 I 12
s Puma_concolor.QAVW01000427.1                          131540361 32 - 161321710 cat----gtg-aac--tt---tg---g----a--tta-tga--------------c--agcc---------ctgagt-----------------------------------------------
i Puma_concolor.QAVW01000427.1                          C 0 I 12
s Pygathrix_cinerea.k141_951151                              2898 43 -      8225 cac----gtg-act--tt----g---a----a--atc-agc--------------c--gaac---------ctgagtt-c---------------c-acc-a---------------c--actt
i Pygathrix_cinerea.k141_951151                         C 0 I 5
s Pygathrix_nigripes_b.ctg25                                14340734 43 -  15297009 cac----gtg-act--tt----g---a----a--atc-agc--------------c--gaac---------ctgagtt-c---------------c-acc-a---------------c--actt
i Pygathrix_nigripes_b.ctg25                               C 0 I 5
s Pygathrix_nigripes_a.k141_758202                             2915 43 -      8240 cac----gtg-act--tt----g---a----a--atc-agc--------------c--gaac---------ctgagtt-c---------------c-acc-a---------------c--actt
i Pygathrix_nigripes_a.k141_758202                        C 0 I 5
s Rangifer_tarandus.RanTarSib_scaffold_24239                20852 45 +     68503 -------GTG-AAT--TT---TA---A----A--GTC-CAACAGCCAGAGTTCCAC--AAAC---------CAGAGTT-C--------------------------------------------
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 I 9
s Rattus_norvegicus.chr11                                13917995 44 +  90463843 CCC----AGA-CTT--TT----G---AGATAA--ATA-ACA--------------C--CGAT---------CTTAGTT-C---------------C-ACT-G---------------T--T---
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1792951 39 +   2252614 -----------ACT--tt---tg---g----a--gtcttga--------------c--aacc---------ctgagtt-c---------------t-act-g---------------t--ggtt
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   152255197 43 - 206558726 CAC----GTG-ACT--TT----G---A----A--ATC-AGC--------------C--GAAC---------CTGAGTT-C---------------C-ACC-A---------------C--ACTT
i Rhinopithecus_roxellana.NC_044549.1                   C 0 I 5
s Rhinopithecus_strykeri.ctg241                            462005 43 +   1472273 cac----gtg-act--tt----g---a----a--atc-agc--------------c--gaac---------ctgagtt-c---------------c-acc-a---------------c--actt
i Rhinopithecus_strykeri.ctg241                         C 0 I 5
s Saiga_tatarica.SaiTat_scaffold_371890                      1263 45 -      4338 -------GTG-AAT--TG---TA---G----A--GTC-CAACAGCCAGAGTTCCAC--AAAC---------CAGAGTT-C--------------------------------------------
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 I 9
s Saimiri_boliviensis.NW_024100938.1                     15676883 43 -  43202129 GAT----GTG-AAT--TT----A---G----A--ATC-AGA--------------C--AAAC---------CTGAGCT-C---------------C-ACC-A---------------T--GCTT
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        8796 43 +     34089 GAT----GTG-AAT--TT----A---G----A--ATC-AGA--------------C--AAAC---------CTGAGCT-C---------------C-ACC-A---------------A--GCTT
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              8736 43 -     60842 GAT----GTG-AAT--TT----A---G----A--ATC-AGA--------------C--AAAC---------CTGAGCT-C---------------C-ACC-A---------------T--GCTT
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              8830 43 +     67014 GAT----GTG-AAT--TT----A---G----A--ATC-AGA--------------C--AAAC---------CTGAGCT-C---------------C-ACC-A---------------A--GCTT
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              8807 43 +     60816 GAT----GTG-AAT--TT----A---G----A--ATC-AGA--------------C--AAAC---------CTGAGCT-C---------------C-ACC-A---------------T--GCTT
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 8744 43 -     76454 GAT----GTG-AAT--TT----A---G----A--ATC-AGA--------------C--AAAC---------CTGAGCT-C---------------C-ACC-A---------------T--GCTT
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17345529 43 -  30362882 gat----gtg-aat--tt----a---g----a--atc-aga--------------c--aaac---------ctgagtt-c---------------c-acc-a---------------t--gctt
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         24850 43 -     62485 gat----gtg-aat--tt----a---g----a--atc-aga--------------c--aaac---------ctgagtt-c---------------c-acc-a---------------t--gctt
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   39944 44 -    114521 CAA----GTA-ACTTTT-----G---G----A--ATC-CCA--------------C--AGAC---------ATGAGTT-C---------------C-ACT-A---------------T--GGTG
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1743075                       45443 43 +     45790 CAC----GTG-ACT--TT----G---A----A--ATC-AGC--------------C--GAAC---------CTGAGTT-C---------------C-ACC-A---------------C--ACTT
i Semnopithecus_entellus.k141_1743075                   C 0 I 5
s Semnopithecus_hypoleucos.k141_2141024                      1216 43 -      8815 CAC----GTG-ACT--TT----G---A----A--ATC-AGC--------------C--GAAC---------CTGAGTT-C---------------C-ACC-A---------------C--ACTT
i Semnopithecus_hypoleucos.k141_2141024                 C 0 I 5
s Semnopithecus_johnii.k141_1300894                          1233 43 +     13764 CAC----GTG-ACT--TT----G---A----A--ATC-AGC--------------C--GAAC---------CTGAGTT-C---------------C-ACC-A---------------C--ACTT
i Semnopithecus_johnii.k141_1300894                     C 0 I 5
s Semnopithecus_priam.k141_368201                            9972 43 -     20692 CAC----GTG-ACT--TT----G---A----A--ATC-AGC--------------C--GAAC---------CTGAGTT-C---------------C-ACC-A---------------C--ACTT
i Semnopithecus_priam.k141_368201                       C 0 I 5
s Semnopithecus_schistaceus.k141_628310                     45517 43 -     53123 CAC----GTG-ACT--TT----G---A----A--ATC-AGC--------------C--GAAC---------CTGAGTT-C---------------C-ACC-A---------------C--ACTT
i Semnopithecus_schistaceus.k141_628310                 C 0 I 5
s Semnopithecus_vetulus.k141_748269                          4571 43 +     17284 CAC----GTG-ACT--TT----G---A----A--ATC-AGC--------------C--GAAC---------CTGAGTT-C---------------C-ACC-A---------------C--ACTT
i Semnopithecus_vetulus.k141_748269                     C 0 I 5
s Sigmodon_hispidus.SigHis_scaffold_11332                  105776 42 -    120886 -AC----ATG-AGT--AT----G---G----A--ATC-ATA--------------C--CTAT---------CTTAGAT-C---------------T-ACT-G---------------T--GATT
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            23893 56 +    739146 CAA----GTA-ATT--TT---CA---G----A--GTT-TTA--------------T--ACAC---------CTAAGTT-T---------------C-ACG-A--CCTAAATTTTAT-T--GATT
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17774129 29 -  27805282 CAG----T--GATT--TT--A-G---G----A--ATT-CCA--------------C--AAAC---------CAGA-------------------------------------------------
i Sorex_araneus.JH798170.1                              C 0 I 10
s Spermophilus_dauricus.KZ294190.1                        2244392 44 +   2842873 cat----gtg-cat--tt----g---g----a--atc-aga--------------t--aaat---------atgaatt-c---------------caact-g---------------t--ggtt
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             239434 32 -    276980 gat----gtg-act--tt---tg---g----a--gtc-tga--------------c--aagc---------ctgaga-----------------------------------------------
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 I 12
s Suricata_suricatta.SurSur_flattened_line_20339            33546 32 +     62062 cat----gtg-acc--tt---tg---g----a--ttt-aga--------------c--aagc---------ctgagt-----------------------------------------------
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 I 12
s Sus_scrofa.CM000824.4                                 189275348 25 + 218635234 -------------------------------AGAGTC-TGA--------------T--AAAT---------CTGAGTT-C---------------C-AC-------------------------
i Sus_scrofa.CM000824.4                                 I 12 I 7
s Symphalangus_syndactylus.tarseq_24                        19146 43 -  13920577 GAT----GTG-AAT--TT----G---G----A--ATC-AGA--------------C--AAAC---------CTGAGTT-C---------------C-ACC-A---------------C--GCTT
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                2679 44 +     20549 cat----ttg-act--tt---tg---g----a--gcc-tga--------------c--aaac---------ttgagtt-c---------------t-act-g---------------t--ggtt
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               17643 44 +     45698 CCC----TTG-AAT--TT---TG---G----A--CTC-AGA--------------T--AAAC---------CTGAGTT-A---------------C-ACT-T---------------T--TGTC
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      811146 46 +   1148477 --------------------------G----A--ATC-AGA--------------A--GAAC---------CTGACCT-C---------------C-Acaaacctgagttcca-t--tgtggtt
i Tapirus_indicus.TapInd_scaffold_176                   I 9 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  61788 46 +     99546 --------------------------G----A--GTC-AGA--------------A--GAAC---------CTGACCT-C---------------C-ACAAA--CCTGAGTTCCGT-TGTGGTT
i Tapirus_terrestris.TapTer_scaffold_14939              I 9 C 0
s Theropithecus_gelada.CM009951.1                       194012266 42 - 194193292 AAT----GTG-AAT--TT----G---G----A--ATC-AGA--------------C--AAAC----------TGAGTT-C---------------C-ACC-A---------------T--GATT
i Theropithecus_gelada.CM009951.1                       N 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                   734 44 -      3104 tac----atg-act--tt---tc---a----a--ttc-aga--------------t--aaac---------ccaagtt-c---------------c-acc-a---------------t--ggtt
i Tolypeutes_matacus.TolMat_scaffold_475685             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  138443 44 -    259118 tat----ttg-act--tt---aa---g----a--gtc-tga--------------c--aaac---------ttgagtt-c---------------t-act-g---------------t--gttt
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_672638                         4816 43 +     38635 CAC----GTG-ACT--TT----G---A----A--ATC-AGC--------------C--GAAC---------CTGAGTT-C---------------C-ACC-A---------------C--ACTT
i Trachypithecus_auratus.k141_672638                    C 0 I 5
s Trachypithecus_crepusculus.k141_863597                     4809 43 -     23436 CAC----GTG-ACT--TT----G---A----A--ATC-AGC--------------C--GAAC---------CTGAGTT-C---------------C-ACC-A---------------C--ACTT
i Trachypithecus_crepusculus.k141_863597                C 0 I 5
s Trachypithecus_cristatus.k141_968903                      32458 43 +     43409 CAC----GTG-ACT--TT----G---A----A--ATC-AGC--------------C--GAAC---------CTGAGTT-C---------------C-ACC-A---------------C--ACTT
i Trachypithecus_cristatus.k141_968903                  C 0 I 5
s Trachypithecus_francoisi.k141_1012484                       742 43 +      8809 CAC----GTG-ACT--TT----G---A----A--ATC-AGC--------------C--GAAC---------CTGAGTT-C---------------C-ACC-A---------------C--ACTT
i Trachypithecus_francoisi.k141_1012484                 C 0 I 5
s Trachypithecus_geei.k141_137495                           29971 43 -     42322 cac----gtg-act--tt----g---a----a--atc-agc--------------c--gaac---------ctgagtt-c---------------c-acc-a---------------c--actt
i Trachypithecus_geei.k141_137495                       C 0 I 5
s Trachypithecus_germaini.k141_240878                        4936 43 -     24955 CAC----GTG-ACT--TT----G---A----A--ATC-AGC--------------C--GAAC---------CTGAGTT-C---------------C-ACC-A---------------C--ACTT
i Trachypithecus_germaini.k141_240878                   C 0 I 5
s Trachypithecus_hatinhensis.k141_641377                     1107 43 +      1365 CAC----GTG-ACT--TT----G---A----A--ATC-AGC--------------C--GAAC---------CTGAGTT-C---------------C-ACC-A---------------C--ACTT
i Trachypithecus_hatinhensis.k141_641377                C 0 I 5
s Trachypithecus_laotum.k141_897381                         45511 43 -     53586 CAC----GTG-ACT--TT----G---A----A--ATC-AGC--------------C--GAAC---------CTGAGTT-C---------------C-ACC-A---------------C--ACTT
i Trachypithecus_laotum.k141_897381                     C 0 I 5
s Trachypithecus_leucocephalus.k141_352489                   1082 43 +      9423 CAC----GTG-ACT--TT----G---A----A--ATC-AGC--------------C--GAAC---------CTGAGTT-C---------------C-ACC-A---------------C--ACTT
i Trachypithecus_leucocephalus.k141_352489              C 0 I 5
s Trachypithecus_melamera.k141_950981                        2097 43 -      3512 CAC----GTG-ACT--TT----G---A----A--ATC-AGC--------------C--GAAC---------CTGAGTT-C---------------C-ACC-A---------------C--ACTT
i Trachypithecus_melamera.k141_950981                   C 0 I 5
s Trachypithecus_obscurus.k141_588024                        4821 43 +      4963 CAC----GTG-ACT--TT----G---A----A--ATC-AGC--------------C--GAAC---------CTGAGTT-C---------------C-ACC-A---------------C--ACTT
i Trachypithecus_obscurus.k141_588024                   C 0 I 5
s Trachypithecus_phayrei.ctg364                            232320 43 -   1198723 cac----gtg-act--tt----g---a----a--atc-agc--------------c--gaac---------ctgagtt-c---------------c-acc-a---------------c--actt
i Trachypithecus_phayrei.ctg364                         C 0 I 5
s Trachypithecus_pileatus.k141_532233                       29991 43 -     40754 cac----gtg-act--tt----g---a----a--atc-agc--------------c--gaac---------ctgagtt-c---------------c-acc-a---------------c--actt
i Trachypithecus_pileatus.k141_532233                   C 0 I 5
s Trichechus_manatus.JH594618.1                          16090176 44 +  31416278 cat----ctg-act--tt---tg---g----a--atc-aga--------------c--aaac---------ctaagtt-c---------------c-acc-a---------------a--ggtt
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2798109 43 -   3938065 AAT----GTA-ACT--TT----G---G----G--ATC-AGG--------------C--ACAC---------CTGTGTT-C---------------C-Acc-a---------------t--attt
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                   10041 43 +     13056 AAT----GTA-ACT--TT----G---G----G--ATC-AGG--------------C--ACAC---------CTGTGTT-C---------------C-ACC-A---------------T--ATTT
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69317536 59 -  96451834 cat----gtg-act--tg---tt---g----a--gcc-tga--------------c--aaac---------ctgagtt-c---------------c-gcaaacctgacttccactg-t--ggtc
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                     400 42 +    136657 CAA----GCA-ACT--G-----G---G----A--AGC-CAA--------------C--AAGC---------CTGAGTT-C---------------C-ACT-G---------------T--GTTT
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 C 0
s Ursus_maritimus.KK498671.1                              6521064 32 +  28682327 cat----gtg-act--tt---tg---g----a--gtc-tga--------------c--aagc---------ctgagt-----------------------------------------------
i Ursus_maritimus.KK498671.1                            C 0 I 12
s Varecia_rubra.k141_432109                                  9745 43 -     20643 cat----gtg-att--tt----g---g----a--atc-aca--------------c--aaac---------ctgagtt-c---------------t-acc-a---------------t--ggtt
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             29280 43 -     33872 cat----gtg-att--tt----g---g----a--atc-aca--------------c--aaac---------ctgagtt-c---------------t-acc-a---------------t--ggtt
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1528572 48 -   2331223 CAT----GTG-ACT--TT---TA---G----A--ATC-CTA--------------C--AAGC---------CTGAGTT-C---------------C-ACA-A---ACCt--------g--agtt
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                144755 32 -    281493 CAT----GAG-ACT--TT---TG---A----A--GTC-TGC--------------C--AAGC---------CTGAGT-----------------------------------------------
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 I 12
s Xerus_inauris.XerIna_scaffold_7898                       131881 44 -    134049 TAT----GTG-CAT--AT----G---G----A--ATC-ATA--------------C--AAAT---------ATGAATT-A---------------CAACT-G---------------T--GGTG
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        220220 32 -    227762 cat----gtg-act--tt---tg---g----a--gtc-taa--------------c--aaac---------ctgagt-----------------------------------------------
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 I 12
s Zapus_hudsonius.ZapHud_scaffold_256618                     1220 43 -      2259 tac----ttg-agt--tt----a---a----a--atc-aga--------------t--caat---------CTAAATT-C---------------C-AGT-G---------------t--ggtt
i Zapus_hudsonius.ZapHud_scaffold_256618                I 349 I 8
s Ziphius_cavirostris.ZipCav_flattened_line_60625            2260 59 -     13665 CAT----GTG-ACT--TG---TT---G----A--GCC-TGA--------------C--AAAC---------CTGAGTT-C---------------C-ACAAACCTGACTTCCACTG-T--GGTC
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Petromus_typicus.PetTyp_scaffold_33007                    17492  0 -     36578 C
e Tragulus_javanicus.TraJav_scaffold_14717                   9488 743 +     90398 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Tarsius_wallacei.k141_48636                               64696  0 +     65473 C
e Tarsius_lariang.k141_609102                               31387  0 +     42269 C
e Rhinopithecus_bieti.k119_554384                            2917  0 -     17045 C
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Cephalopachus_bancanus.k141_702587                        12545  0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530  0 +    345090 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               17910 5 +    209709 T---C--TT----C
s Acinonyx_jubatus.LLWD01000356.1                         2039879 5 +   3721120 t---c--tt----c
i Acinonyx_jubatus.LLWD01000356.1                       I 12 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    118222 5 -    189883 T---C--TT----T
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10663840 5 +  23371972 t---t--tt----c
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 12 C 0
s Ailurus_fulgens.LNAC01000003.1                          7100369 3 -  16596857 T---C--T------
i Ailurus_fulgens.LNAC01000003.1                        I 12 C 0
s Allactaga_bullata.AllBul_scaffold_141108                   1212 5 -      7259 T---T--TT----T
i Allactaga_bullata.AllBul_scaffold_141108              I 8 C 0
s Allenopithecus_nigroviridis.k141_2469532                   5784 5 -     60446 T---C--TT----C
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         6501 5 -     29318 t---c--tt----c
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         5439 5 +     38766 t---c--tt----c
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          6395 5 -     80423 t---c--tt----c
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              1379 5 +     19852 t---c--tt----c
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                3623 5 -     12443 t---c--tt----c
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                              922 5 +      5070 t---c--tt----c
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                  667 5 -      1641 t---c--tt----c
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          3406 5 -     24210 t---c--tt----c
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           29988 5 -     30219 t---c--tt----c
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_405616                              5824 5 +     16794 t---c--tt----c
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                             956 5 -      1470 t---c--tt----c
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             5101 5 -      9835 t---c--tt----c
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3525913 5 +   4113121 T---C--TT----C
i Ammotragus_lervia.NIVO01013474.1                      I 9 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      392932 5 -    631301 T---T--TT----C
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             3346 5 +     55446 T---C--TT----C
i Antilocapra_americana.AntAmePen_scaffold_27338        I 9 C 0
s Aotus_azarae.k141_3170768                                 66710 5 +     78111 t---c--tt----c
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            9658 5 +     22701 T---C--TT----C
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5753615 5 +   9889416 T---C--TT----C
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                            10214 5 -    104377 t---c--tt----c
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                              10221 5 +     23246 t---c--tt----c
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     2750 5 +     11424 C---C--TT----C
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                11338 8 -     29036 TTTTT--TT----C
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9543509 5 +  39197703 t---c--tt----c
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             64783 5 +     85812 t---c--tt----c
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                15796 5 +     89302 t---c--tt----c
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             20297 5 -     58268 t---c--tt----c
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             68291 5 +    119057 t---c--tt----c
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              10260 5 -     25888 t---c--tt----c
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                11322 5 -     16375 t---c--tt----c
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               4938 5 +      6337 t---c--tt----c
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26384389 5 +  51448160 t---c--tt----c
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        9562 5 -     13118 t---c--tt----c
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   48377 5 -     72089 T---C--TT----C
i Beatragus_hunteri.BeaHun_scaffold_21644               I 9 C 0
s Bison_bison.KN264915.1                                   302516 5 -   6870073 T---C--TT----C
i Bison_bison.KN264915.1                                I 16 C 0
s Bos_indicus.CM003021.1                                 22956614 5 + 161108492 T---C--TT----C
i Bos_indicus.CM003021.1                                I 16 C 0
s Bos_mutus.JH883513.1                                     418855 5 +    998990 T---C--TT----C
i Bos_mutus.JH883513.1                                  I 16 C 0
s Bos_taurus.CM000177.6                                  22665268 5 + 158972876 T---C--TT----C
i Bos_taurus.CM000177.6                                 I 16 C 0
s Bubalus_bubalis.KI419065.1                               675027 5 +   1914593 T---C--TT----C
i Bubalus_bubalis.KI419065.1                            I 9 C 0
s Cacajao_ayresi.k141_724503                               118159 5 -    171031 t---c--tt----c
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 17179 5 +    125063 t---c--tt----c
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                19226 5 -    216513 t---c--tt----c
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       11769 5 -    134917 t---c--tt----c
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3223512 5 -   8989139 T---C--TT----C
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           401213 5 -  15254737 T---C--TT----C
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2976950 5 +   6889770 T---C--TT----C
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11526719 5 +  39901454 T---C--TT----C
i CanFam4.chr31                                         I 12 I 2
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   21693 5 +     87036 T---C--TT----C
i Canis_lupus_VD.CanFam_VD_scaffold_16982               I 12 I 2
s Canis_lupus_dingo.QKWQ01001993.1                       11273402 5 -  35597290 t---c--tt----c
i Canis_lupus_dingo.QKWQ01001993.1                      I 12 I 2
s Canis_lupus_familiaris.chr31                           11096113 5 +  39895921 t---c--tt----c
i Canis_lupus_familiaris.chr31                          I 12 I 2
s Canis_lupus_orion.HG994411.1                           16462898 5 -  44759192 t---c--tt----c
i Canis_lupus_orion.HG994411.1                          I 12 I 2
s Capra_aegagrus.CM003214.1                              21333857 5 + 157394656 T---C--TT----C
i Capra_aegagrus.CM003214.1                             I 9 C 0
s Capra_hircus.CM004562.1                               135712212 5 - 157403528 T---C--TT----C
i Capra_hircus.CM004562.1                               I 9 C 0
s Capromys_pilorides.CapPil_scaffold_529800                   578 5 -      2320 T---C--TT----T
i Capromys_pilorides.CapPil_scaffold_529800             C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               62354 6 +     67245 t--tt--tt----c
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_1326                      348 3 -    202837 T---C--T------
i Castor_canadensis.CasCan_scaffold_1326                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   163024 5 -    276539 T---C--CT----C
i Catagonus_wagneri.CatWag_scaffold_1305                I 7 C 0
s Cavia_aperea.AVPZ01000278.1                            15790039 5 -  24422027 T---C--TT----T
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15801978 5 -  24440124 T---C--TT----T
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       180150 5 +    436027 T---C--TT----T
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18895884 5 -  29618158 t---c--tt----c
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                12534 5 -     26817 t---c--tt----c
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                16778 5 +     25043 t---c--tt----c
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4367958 5 +   7569818 t---c--at----c
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         7715 5 -      9338 T---C--AT----C
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6559725 5 +   6739814 T---C--TT----C
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      31202 5 +     60454 t---c--tt----c
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          6406 5 -     21101 t---c--tt----t
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         63716 5 -    107033 t---c--tt----c
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        6579 5 -     17608 t---c--tt----c
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          3744 5 +     45019 t---c--tt----c
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           4020 5 +     15177 t---c--tt----c
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          6626 5 +     16677 t---c--tt----c
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           28816 5 +     35983 t---c--tt----c
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11995347 5 +  12117833 t---c--tt----c
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46482323 5 +  46592721 t---c--tt----c
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                        440 5 -     27215 t---c--tt----c
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       6640 5 +     35577 t---c--tt----c
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        6434 5 -     25661 t---c--tt----c
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        6606 5 -     17744 t---c--tt----c
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        25975 5 +     37128 t---c--tt----c
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           4938 5 -      6963 c---c--tt----c
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           63531 5 -     68416 t---c--tt----t
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                           12651 5 +     13308 t---c--tt----t
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             9820 5 -     18223 T---C--TT----C
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              1558 5 +    188999 T---C--TT----C
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           45857 5 +     57117 T---C--TT----C
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          50537 5 +     54541 T---C--TT----C
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15964730 5 +  43084221 t---c--tt----t
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         75338 5 +    196370 t---c--tt----c
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          19519 5 +     40510 t---c--tt----c
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15144160 5 -  15256731 t---c--tt----c
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      38624 5 -     53260 t---c--tt----c
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101149183 5 + 101219884 T---C--TT----C
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                19047 5 -     21363 c---c--tt----c
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           764351 5 +    964067 c---c--tt----c
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_629495              2597 5 -      3120 T---C--TT----C
i Chrysochloris_asiatica.ChrAsi_scaffold_629495         C 0 C 0
s Colobus_angolensis.KN983490.1                            283854 5 +    886210 T---C--TT----C
i Colobus_angolensis.KN983490.1                         I 5 C 0
s Colobus_guereza.LG08                                   96946743 5 - 156195979 t---c--tt----c
i Colobus_guereza.LG08                                  I 5 C 0
s Colobus_polykomos.k141_688201                               406 5 +      1908 t---c--tt----c
i Colobus_polykomos.k141_688201                         I 5 C 0
s Condylura_cristata.JH655880.1                          60622512 5 +  78930452 t---c--tt----c
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         2876 5 -      5782 t---c--tt----c
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 283000 5 -    399297 T---C--TT----T
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53035361 5 +  72327488 T---C--TT----C
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              2464 7 -     22648 T---GTTTT----C
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            57858 5 -     70449 t---c--tt----c
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 12 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  214616 5 -    956709 T---A--TG----T
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 34698 5 -     67205 T---C--TT----T
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                21220 5 +     26546 T---C--TT----T
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             62359 5 -    236241 C---C--TT----T
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          185999 5 -   6883506 c---c--tt----t
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16849482 5 +  31942871 t---c--tt----c
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80041008 1 -  96802777 t-------------
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18701566 6 -  18957592 t--tt--tt----c
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 326614 5 +    993696 t---c--at----c
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   7246 5 +    151128 T---C--AT----C
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   159985 5 +    228994 T---C--TT----T
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3660655 5 +   4240102 T---C--CT----T
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  3009 5 -     11986 T---C--CT----T
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                40936 5 -     73477 T---C--TT----T
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           23000260 5 -  44670279 t---c--tt----c
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1496593 5 +   1727528 T---C--TT----C
i Elaphurus_davidianus.JRFZ01086400.1                   I 9 C 0
s Elephantulus_edwardii.JH947210.1                        7834523 5 +  15467074 T---C--AT----C
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        244163 5 -    369425 T---C--TT----C
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Enhydra_lutris.KZ291749.1                              85877832 3 +  99434291 t---c--t------
i Enhydra_lutris.KZ291749.1                             I 12 C 0
s Eptesicus_fuscus.JH977687.1                             4709319 5 +   6522550 T---C--TT----T
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5856706 5 -   7175178 t---c--tt----c
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13355192 5 +  41866177 t---c--tt----c
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          16682 5 +     92910 t---c--tt----c
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11541632 5 +  16010500 t---t--tt----t
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48781193 5 -  48907691 t---c--tt----c
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          319232 5 +    330699 T---C--TT----C
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             65689 5 +     89355 T---C--TT----C
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              9635 5 +     13586 T---C--TT----C
i Eulemur_albifrons.k141_715837                         I 43 I 28
s Eulemur_collaris.k141_1015201                              2894 5 -      4292 T---C--TT----C
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            16031 5 +     36558 T---C--TT----C
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            12353 5 +     60246 t---c--tt----c
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                15838 5 +    109717 t---c--tt----c
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 3821 5 -     19505 T---C--TT----C
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                20496 5 +     27497 T---C--TT----C
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           22952 5 +     26808 T---C--TT----C
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                37684 5 +     46535 T---C--TT----C
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              20425 5 -     29447 T---C--TT----C
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129899299 5 - 159252932 t---c--tt----c
i Felis_catus.CM001386.2                                I 12 C 0
s Felis_catus_fca126.CM031420.1                         129286274 5 - 158578461 t---c--tt----c
i Felis_catus_fca126.CM031420.1                         I 12 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 27373 5 +     52776 t---c--tt----c
i Felis_nigripes.FelNig_flattened_line_8080             I 12 C 0
s Fukomys_damarensis.KN123630.1                          13896505 5 -  19261668 G---C--TT----C
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               159933 5 +    324696 t---c--tt----c
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    186370 5 -    189561 T---C--TT----C
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 9 C 0
s Glis_glis.GliGli_scaffold_79770                           16827 5 -     18683 T---C--TT----C
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_2641970                               598 5 +      9263 t---c--tt----c
i Gorilla_beringei.k141_2641970                         I 5 C 0
s Gorilla_gorilla.LT578340.1                             52344691 5 + 195582420 t---c--tt----c
i Gorilla_gorilla.LT578340.1                            I 5 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   80143 5 +    118900 t---c--tt----c
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         6420 5 +     10286 t---c--tt----c
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             4898 5 -     11661 t---c--tt----c
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                            10225 5 +     56096 t---c--tt----c
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        33474 5 -     42470 t---c--tt----c
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        50097 5 -     54384 t---c--tt----c
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              22998 5 +     53719 t---c--ct----c
i Helogale_parvula.HelPar_flattened_line_22962          I 12 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                33262 5 -     91191 T---C--TT----C
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 9 C 0
s Heterocephalus_glaber.JH602058.1                        2560997 5 +  31725842 G---C--TT----C
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               63222 5 +     73687 t---c--tt----c
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              151022 5 +    277961 T---C--TT----C
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      283411 5 -    477199 t---c--tt----c
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959               1179 5 +     26078 t---c--tt----c
i Hipposideros_galeritus.HipGal_scaffold_52959          I 49 C 0
s Hoolock_leuconedys.ctg83                                  28460043 5 -  32676794 T---C--TT----C
i Hoolock_leuconedys.ctg83                                 I 51 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 23469 5 -     67322 T---C--TT----T
i Hyaena_hyaena.HyaHya_flattened_line_20729             I 12 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           21605 2 -    119109 T---C---------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_1816750                             2095 5 +      3202 T---C--TT----C
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1633646                              2065 5 -      2102 T---C--TT----C
i Hylobates_agilis.k141_1633646                         C 0 C 0
s Hylobates_klossii.k141_468230                              3584 5 +      5464 T---C--TT----C
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14628930 5 -  25970782 T---C--TT----C
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            1482 5 +      4161 T---C--TT----C
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             37792 5 -     60944 T---C--TT----C
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     9900 5 +     22540 T---C--TT----C
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7130734 2 +  13083262 --------t----t
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   1943 5 +      3484 t---c--tt----c
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              13220 5 +     17520 T---C--TT----C
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8578227 5 +  11848649 T---T--TT----T
i Jaculus_jaculus.JH725517.1                            I 8 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               27839 5 +     37189 T---C--TT----C
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          54378 5 -    147782 T---C--TT----C
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    5914 5 +     26176 T---C--TT----T
i Lasiurus_borealis.LasBor_scaffold_59542               I 9 C 0
s Lemur_catta.scaffold_1                                258411772 5 - 285822530 t---c--tt----c
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        29081 5 +     39228 T---C--TT----C
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            58445 5 +     63517 T---C--CT----C
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        36825 5 -     38897 T---C--TT----C
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      2871 5 -     13103 T---C--TT----C
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3091809 3 -   3498232 t---c--t------
i Leptonychotes_weddellii.KB714749.1                    I 12 C 0
s Lepus_americanus.LepAme_scaffold_62849                    21224 5 +     22452 T---A--TT----T
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            140154 5 +   3060487 t---c--tt----c
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19252814 5 +  19376315 t---c--tt----c
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loxodonta_africana.GL010040.1                          20599146 5 -  62548349 t---c--tt----c
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11095569 5 +  39895028 t---c--tt----c
i Lycaon_pictus.CM007556.1                              I 12 I 2
s Macaca_arctoides.k141_2201161                             24565 5 +     74745 T---C--TT----C
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12711026 5 +  12821369 T---C--TT----C
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                3599 5 -     26467 T---C--TT----C
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           51470 5 +     63263 T---C--TT----C
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 3580 5 -     26361 T---C--TT----C
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 6770 5 -      7381 T---C--TT----C
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  49999 5 -     79256 T---C--TT----C
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196040097 5 + 196197964 T---C--TT----C
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11450267 5 +  11645122 T---C--TT----C
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   8953 5 -     46448 T---C--TT----C
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                6616 5 -     13212 T---C--TT----C
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 20296 5 -     55006 T---C--TT----C
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43845411 5 +  43892939 T---C--TT----C
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               21580 5 -     24607 T---C--TT----C
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               8950 5 -     27140 T---C--TT----C
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43441986 5 -  43563597 t---c--tt----c
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4454790 5 -   4543643 t---c--tt----c
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36878603 2 +  64221397 --------t----c
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Manis_javanica.JSZB01003966.1                            152540 3 +    252755 T---C--T------
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             40134 3 +     58827 T---C--T------
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       65961 5 -    234502 t---c--ct----c
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             6935 3 -     87323 T---C--T------
i Mellivora_capensis.MelCap_flattened_line_15433        I 12 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 1616 5 +    115071 T---C--TT----C
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1051885 5 -  26018355 T---C--TT----C
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    2811 5 -     12939 T---C--TT----C
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16514800 5 +  47401472 T---A--TT----T
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  41828 5 -     48017 t---c--ct----c
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               25314 5 -     32043 T---T--TT----C
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22824960 5 -  98408828 T---C--TT----A
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8213367 5 +  10048721 t---c--ct----c
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            37858 5 +     45743 t---c--ct----c
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         6532 5 +     29742 t---c--ct----c
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        17305 3 -    104932 t---c--t------
i Mirounga_angustirostris.MirAng_flattened_line_8852    I 12 C 0
s Mirza_zaza.k141_593947                                     5484 5 -     12809 t---c--tt----t
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 150601 1 +    154973 t-------------
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                163845 5 +    265003 t---t--tt----c
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  6611 5 -     19904 T---C--TT----C
i Moschus_moschiferus.MosMos_scaffold_78805             I 9 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  150673 5 -    168139 t---c--ct----c
i Mungos_mungo.MunMun_flattened_line_8729               I 12 C 0
s Murina_feae.MurFea_scaffold_2254                          24775 5 -    100666 T---C--TT----T
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70772191 5 +  92629107 C---T--GA----C
i Mus_caroli.LT608236.1                                 C 0 I 32
s Mus_musculus.chr16                                     75494245 5 +  98207768 C---T--GA----C
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67560997 5 +  89017189 C---T--GA----C
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74336971 5 +  97876770 C---T--GA----C
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             15232 5 +     98495 t---c--tt----t
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4429041 3 -  28371801 t---c--t------
i Mustela_putorius.JH417978.1                           I 12 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     94200 5 -    117718 G---C--TT----T
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               971654 5 +   8389877 t---c--tt----t
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5023074 5 +   6462685 t---c--tt----t
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3469158 5 -   3747815 t---c--tt----t
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        14399 5 +     66751 t---c--tt----t
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             8014 5 -      8794 C---C--TT----C
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            240976 5 -    362372 T---C--TT----C
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_1382660                              4189 5 +      5784 t---c--tt----c
i Nasalis_larvatus.k141_1382660                         I 5 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4490703 3 -  14209539 t---c--t------
i Neomonachus_schauinslandi.NINY01007774.1              I 12 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3955192 1 -   4490290 t-------------
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  50913 5 +     94413 t---t--tt----g
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_762468                             601 5 -      2755 t---c--tt----c
i Nomascus_annamensis.k141_762468                       C 0 I 32
s Nomascus_concolor.k141_523891                              1251 5 +      1566 T---C--TT----C
i Nomascus_concolor.k141_523891                         I 48 C 0
s Nomascus_gabriellae.k141_1400361                           1152 5 -      2203 t---c--tt----c
i Nomascus_gabriellae.k141_1400361                      C 0 I 32
s Nomascus_siki_b.tarseq_44                          10087527 5 -  26722205 T---C--TT----C
i Nomascus_siki_b.tarseq_44                         I 48 C 0
s Nomascus_siki_a.k141_421408                                  1066 5 +     16235 t---c--tt----c
i Nomascus_siki_a.k141_421408                             C 0 I 32
s Nyctereutes_procyonoides.CAJHUB010000786.1                38434 5 +   3668941 T---A--TT----C
i Nyctereutes_procyonoides.CAJHUB010000786.1            I 12 I 2
s Ochotona_princeps.JH802095.1                            5000269 5 -  23139505 T---C--TT----C
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3689688 5 +  10294119 t---c--tt----t
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             685407 3 -   3126709 t---c--t------
i Odobenus_rosmarus.KB229369.1                          I 12 C 0
s Odocoileus_virginianus.KZ101650.1                       1084041 5 +   1425656 T---C--TT----C
i Odocoileus_virginianus.KZ101650.1                     I 9 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         42111 5 +     78940 T---C--TT----C
i Okapia_johnstoni.LVCL01S0017931.1                     I 9 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  130756 5 +    145789 T---C--TT----C
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  43456 5 +     62360 T---C--TT----C
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7228866 1 -   7562323 t-------------
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              64555 5 -     66828 t---c--tt----c
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141884241 5 + 163896628 T---C--TT----C
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      315572 5 -    505867 t---c--tt----c
i Otocyon_megalotis.JAEUCK010005121.1                   I 12 I 2
s Ovis_aries.CM001582.2                                 134083048 5 - 275406953 t---c--tt----c
i Ovis_aries.CM001582.2                                 I 9 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      84282 5 +    140051 T---C--TT----C
i Ovis_canadensis.OviCan_scaffold_6251                  I 9 C 0
s Pan_paniscus.CM003386.1                                53339800 5 + 205426864 T---C--TT----C
i Pan_paniscus.CM003386.1                               I 48 C 0
s Pan_troglodytes.CM009241.2                             52442721 5 + 196562556 T---C--TT----C
i Pan_troglodytes.CM009241.2                            I 48 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  40293 5 +    295523 t---c--tt----c
i Panthera_onca.PanOnc_flattened_line_1615              I 12 C 0
s Panthera_pardus.KV860323.1                              3644108 5 +  18214204 t---c--tt----c
i Panthera_pardus.KV860323.1                            I 12 C 0
s Panthera_tigris.KE721879.1                              5033756 5 -   6340057 t---c--tt----c
i Panthera_tigris.KE721879.1                            I 12 C 0
s Pantholops_hodgsonii.KE114631.1                         1071919 5 -   1292953 T---C--TT----C
i Pantholops_hodgsonii.KE114631.1                       I 9 C 0
s Papio_anubis.CM001492.2                               188160775 5 - 188283584 T---C--TT----C
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              3865 5 +     25005 t---c--tt----c
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47518147 5 +  47705337 t---c--tt----c
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 72138 5 -    104429 t---c--tt----c
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   10670 5 +     14967 t---c--tt----c
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 6535 5 -      7628 t---c--tt----c
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    121775 5 -    135482 T---C--TT----C
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 I 12 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       2635 5 +     49596 T---C--TT----C
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4955820 5 -   8017169 T---C--TT----C
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              3333 1 +      8220 T-------------
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Piliocolobus_badius.k141_512007                           29713 5 +     37672 t---c--tt----c
i Piliocolobus_badius.k141_512007                       I 5 C 0
s Piliocolobus_gordonorum.k141_736355                       29630 5 +     67079 t---c--tt----c
i Piliocolobus_gordonorum.k141_736355                   I 5 C 0
s Piliocolobus_kirkii.k141_451083                            4794 5 -     13367 T---C--TT----C
i Piliocolobus_kirkii.k141_451083                       I 5 C 0
s Piliocolobus_tephrosceles.PDMG02000342.1                3428395 5 -   4356645 t---c--tt----c
i Piliocolobus_tephrosceles.PDMG02000342.1              I 5 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            99935 5 +    112873 T---C--TT----T
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           9795 5 +     21690 T---C--TT----C
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       26469 5 +     44506 T---C--TT----C
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        26682 5 +     67491 T---C--TT----C
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      16921 5 -     98129 T---C--TT----C
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     26522 5 +    147771 T---C--TT----C
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         3157 5 -     43940 T---C--TT----C
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          7240 5 -     55515 T---C--TT----C
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         26594 5 +    152463 T---C--TT----C
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       4402 5 -    119457 T---C--TT----C
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         16316 5 +    134592 T---C--TT----C
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          26904 5 -     75465 T---C--TT----C
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.CM009265.2                               104014488 5 - 193656255 T---C--TT----C
i Pongo_abelii.CM009265.2                               I 48 C 0
s Pongo_pygmaeus.ctg127                                   6237450 5 -   6432864 T---C--TT----C
i Pongo_pygmaeus.ctg127                                 I 48 C 0
s Presbytis_comata.k141_678168                              10920 5 +     11126 T---C--TT----C
i Presbytis_comata.k141_678168                          I 5 C 0
s Presbytis_mitrata.k141_1767317                            10909 5 +     15869 T---C--TT----C
i Presbytis_mitrata.k141_1767317                        I 5 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                4328 5 -      9567 T---C--TT----C
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6853146 5 +  12164890 T---C--TT----C
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     21953 5 -     30946 N---N--NN----N
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         8230 5 +     11805 T---T--TT----C
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           47564 5 +     52369 T---T--TT----C
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         39951 5 -     44753 t---t--tt----c
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            21874 5 +     27322 T---T--TT----C
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       21523 5 -     53241 T---T--TT----C
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         43786 5 -     48185 T---T--TA----C
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           38611 5 +     77221 T---C--TT----C
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            6495 5 -     27784 t---t--tt----c
i Pteronotus_parnellii.KE867983.1                       I 3 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        250688 3 -    344369 T---C--T------
i Pteronura_brasiliensis.PteBra_flattened_line_1343     I 12 C 0
s Puma_concolor.QAVW01000427.1                          131540405 5 - 161321710 t---c--tt----c
i Puma_concolor.QAVW01000427.1                          I 12 C 0
s Pygathrix_cinerea.k141_951151                              2946 5 -      8225 t---c--tt----c
i Pygathrix_cinerea.k141_951151                         I 5 C 0
s Pygathrix_nigripes_b.ctg25                                14340782 5 -  15297009 t---c--tt----c
i Pygathrix_nigripes_b.ctg25                               I 5 C 0
s Pygathrix_nigripes_a.k141_758202                             2963 5 -      8240 t---c--tt----c
i Pygathrix_nigripes_a.k141_758202                        I 5 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                20906 5 +     68503 T---C--TT----C
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 9 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1792990 5 +   2252614 t---c--tt----c
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   152255245 5 - 206558726 T---C--TT----C
i Rhinopithecus_roxellana.NC_044549.1                   I 5 C 0
s Rhinopithecus_strykeri.ctg241                            462053 5 +   1472273 t---c--tt----c
i Rhinopithecus_strykeri.ctg241                         I 5 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                      1317 5 -      4338 T---C--TT----C
i Saiga_tatarica.SaiTat_scaffold_371890                 I 9 C 0
s Saimiri_boliviensis.NW_024100938.1                     15676926 5 -  43202129 A---C--TT----C
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        8839 5 +     34089 A---C--TT----C
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              8779 5 -     60842 A---C--TT----C
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              8873 5 +     67014 A---C--TT----C
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              8850 5 +     60816 A---C--TT----C
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 8787 5 -     76454 A---C--TT----C
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17345572 5 -  30362882 t---c--tt----c
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         24893 5 -     62485 t---c--tt----c
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   39988 5 -    114521 T---A--TT----C
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1743075                       45491 5 +     45790 T---C--TT----C
i Semnopithecus_entellus.k141_1743075                   I 5 C 0
s Semnopithecus_hypoleucos.k141_2141024                      1264 5 -      8815 T---C--TT----C
i Semnopithecus_hypoleucos.k141_2141024                 I 5 C 0
s Semnopithecus_johnii.k141_1300894                          1281 5 +     13764 T---C--TT----C
i Semnopithecus_johnii.k141_1300894                     I 5 C 0
s Semnopithecus_priam.k141_368201                           10020 5 -     20692 T---C--TT----C
i Semnopithecus_priam.k141_368201                       I 5 C 0
s Semnopithecus_schistaceus.k141_628310                     45565 5 -     53123 T---C--TT----C
i Semnopithecus_schistaceus.k141_628310                 I 5 C 0
s Semnopithecus_vetulus.k141_748269                          4619 5 +     17284 T---C--TT----C
i Semnopithecus_vetulus.k141_748269                     I 5 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  105818 5 -    120886 T---C--TT----C
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            23949 5 +    739146 T---C--TT----C
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17774168 6 -  27805282 ----GTTTC----C
i Sorex_araneus.JH798170.1                              I 10 C 0
s Spermophilus_dauricus.KZ294190.1                        2244436 2 +   2842873 --------t----t
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             239478 3 -    276980 t---c--t------
i Spilogale_gracilis.SpiGra_flattened_line_905          I 12 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            33590 5 +     62062 t---c--ct----c
i Suricata_suricatta.SurSur_flattened_line_20339        I 12 C 0
s Sus_scrofa.CM000824.4                                 189275380 5 + 218635234 T---C--CT----C
i Sus_scrofa.CM000824.4                                 I 7 C 0
s Symphalangus_syndactylus.tarseq_24                        19189 5 -  13920577 T---C--TT----C
i Symphalangus_syndactylus.tarseq_24                    C 0 I 69
s Tadarida_brasiliensis.TadBra_scaffold_61492                2723 5 +     20549 t---a--tt----c
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               17687 5 +     45698 C---C--TT----C
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      811192 5 +   1148477 t---c--tt----c
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  61834 5 +     99546 T---C--TT----C
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194012308 5 - 194193292 T---C--TT----C
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                   778 5 -      3104 c---t--tt----c
i Tolypeutes_matacus.TolMat_scaffold_475685             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  138487 9 -    259118 t---t--ttttccc
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_672638                         4864 5 +     38635 T---C--TT----C
i Trachypithecus_auratus.k141_672638                    I 5 C 0
s Trachypithecus_crepusculus.k141_863597                     4857 5 -     23436 T---C--TT----C
i Trachypithecus_crepusculus.k141_863597                I 5 C 0
s Trachypithecus_cristatus.k141_968903                      32506 5 +     43409 T---C--TT----C
i Trachypithecus_cristatus.k141_968903                  I 5 C 0
s Trachypithecus_francoisi.k141_1012484                       790 5 +      8809 T---C--TT----C
i Trachypithecus_francoisi.k141_1012484                 I 5 C 0
s Trachypithecus_geei.k141_137495                           30019 5 -     42322 t---c--tt----c
i Trachypithecus_geei.k141_137495                       I 5 C 0
s Trachypithecus_germaini.k141_240878                        4984 5 -     24955 T---C--TT----C
i Trachypithecus_germaini.k141_240878                   I 5 C 0
s Trachypithecus_hatinhensis.k141_641377                     1155 5 +      1365 T---C--TT----C
i Trachypithecus_hatinhensis.k141_641377                I 5 C 0
s Trachypithecus_laotum.k141_897381                         45559 5 -     53586 T---C--TT----C
i Trachypithecus_laotum.k141_897381                     I 5 C 0
s Trachypithecus_leucocephalus.k141_352489                   1130 5 +      9423 T---C--TT----C
i Trachypithecus_leucocephalus.k141_352489              I 5 C 0
s Trachypithecus_melamera.k141_950981                        2145 5 -      3512 T---C--TT----C
i Trachypithecus_melamera.k141_950981                   I 5 C 0
s Trachypithecus_obscurus.k141_588024                        4869 5 +      4963 T---C--TT----C
i Trachypithecus_obscurus.k141_588024                   I 5 C 0
s Trachypithecus_phayrei.ctg364                            232368 5 -   1198723 t---c--tt----c
i Trachypithecus_phayrei.ctg364                         I 5 C 0
s Trachypithecus_pileatus.k141_532233                       30039 5 -     40754 t---c--tt----c
i Trachypithecus_pileatus.k141_532233                   I 5 C 0
s Trichechus_manatus.JH594618.1                          16090220 5 +  31416278 t---c--tt----c
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2798152 4 -   3938065 c---c--tt-----
i Tupaia_chinensis.KB320831.1                           C 0 I 3316
s Tupaia_tana.TupTan_flattened_line_68454                   10084 5 +     13056 C---C--TT----T
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69317595 1 -  96451834 t-------------
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                     442 5 +    136657 T---C--TT----C
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 C 0
s Ursus_maritimus.KK498671.1                              6521108 5 +  28682327 t---c--tt----c
i Ursus_maritimus.KK498671.1                            I 12 C 0
s Varecia_rubra.k141_432109                                  9788 5 -     20643 t---c--tt----c
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             29323 5 -     33872 t---c--tt----c
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1528620 5 -   2331223 t---c--tt----c
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                144799 5 -    281493 T---C--TT----C
i Vulpes_lagopus.VulLag_flattened_line_2045             I 12 I 2
s Xerus_inauris.XerIna_scaffold_7898                       131925 2 -    134049 --------T----C
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        220264 3 -    227762 t---c--t------
i Zalophus_californianus.ZalCal_flattened_line_4097     I 12 C 0
s Zapus_hudsonius.ZapHud_scaffold_256618                     1271 5 -      2259 t---t--tt----g
i Zapus_hudsonius.ZapHud_scaffold_256618                I 8 I 415
s Ziphius_cavirostris.ZipCav_flattened_line_60625            2319 5 -     13665 T---C--TT----C
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Petromus_typicus.PetTyp_scaffold_33007                    17492 0 -     36578 C
e Tragulus_javanicus.TraJav_scaffold_14717                   9488 743 +     90398 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Tarsius_wallacei.k141_48636                               64696 0 +     65473 C
e Tarsius_lariang.k141_609102                               31387 0 +     42269 C
e Rhinopithecus_bieti.k119_554384                            2917 0 -     17045 C
e Rattus_norvegicus.chr11                                13918039 0 +  90463843 C
e Pithecia_vanzolinii.k141_831006                           15424 0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514 0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521 0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292 0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093 0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038 0 +     78826 C
e Pithecia_albicans.k141_991845                             45662 0 -     61926 C
e Perodicticus_potto.k141_1136815                           12351 0 +     61070 C
e Perodicticus_ibeanus.k141_117958                          11200 0 -     23713 C
e Otolemur_garnettii.GL873528.1                          18013505 0 -  38779656 C
e Otolemur_crassicaudatus.k141_505435                        5536 0 -     53940 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65680488 0 +  89412551 C
e Nycticebus_coucang.k141_771591                            15710 0 +     16181 C
e Nycticebus_bengalensis.LG16                            65572300 0 -  95554990 C
e Loris_tardigradus.ctg97                                 3783375 0 +   6799190 C
e Loris_lydekkerianus.k141_550999                           15637 0 +     84689 C
e Galagoides_demidoff.k141_1769638                          15179 0 +     27357 C
e Galago_senegalensis.k141_964197                           18035 0 -     43889 C
e Galago_moholi.ctg555                                     215674 0 -    847004 C
e Cephalopachus_bancanus.k141_702587                        12545 0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530 0 +    345090 C
e Arctocebus_calabarensis.k141_587554                        6827 0 +      9265 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               17915 32 +    209709 CTC--T----T----------GCA---AGCCAT--------GAAA-----------------------------T--CC-ACAGTGG-G-TT-A
s Acinonyx_jubatus.LLWD01000356.1                         2039884 33 +   3721120 ctc--t----c----------ata---agctac--------aaaa-----------------------------t--ct-acagcaa-g-ttat
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    118227 32 -    189883 CAT--T----T----------GAA---AGCTAG--------GAAA-----------------------------T--CT-ATAGCAA-G-CT-T
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10663845 32 +  23371972 ttc--t----c----------ata---aactgt--------gaat-----------------------------tctc----aacaa-g-ttat
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7100372 31 -  16596857 -TC--T----C----------ATA---AGCTAT--------GAAT-----------------------------TGTC----AATAA-G-TTAT
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_141108                   1217 35 -      7259 CTC--TTCA-T----------ACA---AGCCAT--------GATA-----------------------------T--CT-ACTACAA-G-CT-A
i Allactaga_bullata.AllBul_scaffold_141108              C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   5789 32 -     60446 CTC--T----T----------GCA---AGCCAT--------GAAA-----------------------------T--CT-GCAGTGG-G-TT-G
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         6506 32 -     29318 ctc--t----t----------gta---agccat--------gaaa-----------------------------t--ct-acagtgg-g-tt-g
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         5444 32 +     38766 ctc--t----t----------gta---agccat--------gaaa-----------------------------t--ct-acagtgg-g-tt-g
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          6400 32 -     80423 ctc--t----t----------gta---agccat--------gaaa-----------------------------t--ct-acagtgg-g-tt-g
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              1384 32 +     19852 ctt--t----t----------aca---agccaa--------gaaa-----------------------------t--ct-acagtgg-g-tt-a
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                3628 32 -     12443 ctc--t----t----------aca---agccaa--------gaaa-----------------------------t--ct-acagtgg-g-tt-a
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                              927 32 +      5070 ctt--t----t----------aca---agccaa--------gaaa-----------------------------t--ct-acagtgg-g-tt-a
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                  672 32 -      1641 ctc--t----t----------aca---agccaa--------gaaa-----------------------------t--ct-acagtgg-g-tt-a
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          3411 32 -     24210 ctc--t----t----------aca---agccaa--------gaaa-----------------------------t--ct-acagtgt-g-tt-a
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           29993 32 -     30219 ctc--t----t----------aca---agccaa--------gaaa-----------------------------t--ct-acagtgt-g-tt-a
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_405616                              5829 32 +     16794 ctc--t----t----------aca---agccaa--------gaaa-----------------------------t--ct-acagtgg-g-tt-a
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                             961 32 -      1470 ctc--t----t----------aca---agccaa--------gaaa-----------------------------t--ct-acagtgg-g-tt-a
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             5106 32 -      9835 ctc--t----t----------aca---agccaa--------gaaa-----------------------------t--ct-acagtgg-g-tt-a
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3525918 32 +   4113121 CTC--T----T----------GGG---AGCTAT--------GAAG-----------------------------C--CT-ACAACTA-G-CT-A
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      392937 32 -    631301 CTA--T----T----------GTA---AGCTAT--------GAAA-----------------------------T--CT-ACAGCAA-G-TT-A
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             3351 32 +     55446 CTT--T----T----------GTG---AGCTAT--------GAAA-----------------------------T--CT-ACAACTA-G-TT-A
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 66715 32 +     78111 ctc--t----t----------aca---agtcaa--------gaaa-----------------------------t--ct-acagtgg-g-tt-a
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            9663 32 +     22701 CTC--T----T----------ACA---AGCCAA--------GAAA-----------------------------T--CT-ACAGTGG-G-TT-A
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5753620 32 +   9889416 CTC--T----T----------ACA---AGCCAA--------GAAA-----------------------------T--CT-ACAGTGG-G-TT-A
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                            10219 32 -    104377 ctc--t----t----------aca---agccaa--------gaaa-----------------------------t--ct-acagtgg-g-tt-a
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                              10226 32 +     23246 ctc--t----t----------aca---agccaa--------gaaa-----------------------------t--ct-acagtgg-g-tt-a
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     2755 32 +     11424 CTT--C----T----------GCA---CACTAA--------GAAA-----------------------------T--GT-ACAGCAA-A-TT-A
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        6827 20 +      9265 -------------------------------at--------gaaa-----------------------------t--ct-atagcaa-g-tt-a
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                11346 32 -     29036 CTG--T----T----------GCA---AGCTAT--------GAAA-----------------------------T--CT-ACAGGAA-G-TT-A
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9543514 32 +  39197703 ctc--t----t----------aca---ggccaa--------gaaa-----------------------------t--ct-acagtgg-g-tt-a
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             64788 32 +     85812 ctc--t----t----------aca---agccaa--------gaaa-----------------------------t--ct-acagtgg-g-tt-a
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                15801 32 +     89302 ctc--t----t----------aca---agccaa--------gaaa-----------------------------t--ct-acagtgg-g-tt-a
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             20302 32 -     58268 ctc--t----t----------aca---ggccaa--------gaaa-----------------------------t--ct-acagtgg-g-tt-a
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             68296 32 +    119057 ctc--t----t----------aca---agccaa--------gaaa-----------------------------t--ct-acagtgg-g-tt-a
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              10265 32 -     25888 ctc--t----t----------aca---agccaa--------gaaa-----------------------------t--ct-acagtgg-g-tt-a
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                11327 32 -     16375 ctc--t----g----------gtg---aattat--------gaaa-----------------------------t--ct-acagcaa-g-ta-a
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               4943 32 +      6337 ctc--t----g----------gtg---aattat--------gaaa-----------------------------t--ct-acagcaa-g-ta-a
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26384394 32 +  51448160 ctc--t----t----------gtg---agctat--------gaaa-----------------------------c--ct-acagcca-g-tt-a
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        9567 32 -     13118 ctc--t----t----------gtg---atctat--------gaaa-----------------------------c--ct-acagcca-g-tt-a
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   48382 32 -     72089 CTC--T----T----------GTG---AGCTAT--------GAAA-----------------------------C--CT-ACAACTA-G-TT-A
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   302521 32 -   6870073 CTC--T----T----------GTG---AGCTAT--------GAAA-----------------------------C--CT-GCAACTA-G-TT-A
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22956619 32 + 161108492 CTC--T----T----------GTG---AGCTAT--------GAAA-----------------------------C--CT-GCAACTA-G-TT-A
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     418860 32 +    998990 CTC--T----T----------GTG---AGCTAT--------GAAA-----------------------------A--CT-GCAACTA-G-TT-A
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22665273 32 + 158972876 CTC--T----T----------GTG---AGCTAT--------GAAA-----------------------------C--CT-GCAACTA-G-TT-A
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               675032 32 +   1914593 CTC--T----T----------GTG---AGCTAT--------GAAA-----------------------------C--CT-ACGACTA-G-TT-A
i Bubalus_bubalis.KI419065.1                            C 0 I 178
s Cacajao_ayresi.k141_724503                               118164 32 -    171031 ctc--t----c----------aca---agccaa--------gaaa-----------------------------t--ct-acagtag-g-tt-a
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 17184 32 +    125063 ctc--t----c----------aca---agccaa--------gaaa-----------------------------t--ct-acagtag-g-tt-a
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                19231 32 -    216513 ctc--t----c----------aca---agccaa--------gaaa-----------------------------t--ct-acagtag-g-tt-a
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       11774 32 -    134917 ctc--t----c----------aca---agccaa--------gaaa-----------------------------t--ct-acagtag-g-tt-a
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3223517 32 -   8989139 CTC--T----T----------GTG---AGCTAT--------GAAG-----------------------------T--CT-ATTCCTA-G-TT-A
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           401218 32 -  15254737 CTC--T----T----------GTG---AGCTAT--------GAAG-----------------------------T--CT-ATTCCTA-G-TT-A
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2976955 32 +   6889770 CTC--T----T----------GTG---AGCTAT--------GAAG-----------------------------T--CT-ATTCCTA-G-TT-A
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11526726 16 +  39901454 --------------------------------------------T-----------------------------T--CT-ATCACAA-G-TGAT
i CanFam4.chr31                                         I 2 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   21700 16 +     87036 --------------------------------------------T-----------------------------T--CT-ATCACAA-G-TGAT
i Canis_lupus_VD.CanFam_VD_scaffold_16982               I 2 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11273409 16 -  35597290 --------------------------------------------t-----------------------------t--ct-atcACAA-G-TGAT
i Canis_lupus_dingo.QKWQ01001993.1                      I 2 C 0
s Canis_lupus_familiaris.chr31                           11096120 16 +  39895921 --------------------------------------------t-----------------------------t--ct-atcACAA-G-TGAT
i Canis_lupus_familiaris.chr31                          I 2 C 0
s Canis_lupus_orion.HG994411.1                           16462905 16 -  44759192 --------------------------------------------t-----------------------------t--ct-atcACAA-G-TGAT
i Canis_lupus_orion.HG994411.1                          I 2 C 0
s Capra_aegagrus.CM003214.1                              21333862 32 + 157394656 CTC--T----T----------GTG---AGCTAT--------GAAA-----------------------------C--CT-ACAACTA-G-TT-A
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135712217 32 - 157403528 CTC--T----T----------GTG---AGCTAT--------GAAA-----------------------------C--CT-ACAACTA-G-TT-A
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_529800                   583 32 -      2320 CTT--T----T----------GTT---CCCCGT--------GAAA-----------------------------A--AT-AAAGAAA-T-CT-A
i Capromys_pilorides.CapPil_scaffold_529800             C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               62360 32 +     67245 ctg--t----t----------gta---agctat--------gaaa-----------------------------t--ct-acagcaa-g-tt-a
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_1326                      351 24 -    202837 -TC--T----T----------GCA---AGCCAA--------GAAA-----------------------------T--CT-ACAG----------
i Castor_canadensis.CasCan_scaffold_1326                C 0 I 3
s Catagonus_wagneri.CatWag_scaffold_1305                   163029 31 -    276539 CTC--T----T----------GTG---AACTAT--------GAAA-----------------------------T--CC--TAGCCA-G-CT-A
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15790044 30 -  24422027 --T--T----T----------GTA---TCCCAT--------AAAA-----------------------------T--CT-ACTGCAA-T-CT-A
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15801983 30 -  24440124 --T--T----T----------GTA---TCCCAT--------AAAA-----------------------------T--CT-ACTGCAA-T-CT-A
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       180155 30 +    436027 --T--T----T----------GTA---TCCCAT--------AAAA-----------------------------T--CT-ACTGCAA-T-CT-A
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18895889 32 -  29618158 ctc--t----t----------aca---agccaa--------ggaa-----------------------------t--ct-acagtgg-g-tt-a
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                12539 32 -     26817 ctc--t----t----------aca---agccaa--------ggaa-----------------------------t--ct-acagtgg-g-tt-a
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                16783 32 +     25043 ctc--t----t----------aca---agccaa--------ggaa-----------------------------t--ct-acagtgg-g-tt-a
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4367963 32 +   7569818 ctc--c----g----------gta---aactat--------gaaa-----------------------------t--ct-acagcaa-g-tt-a
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         7720 32 -      9338 CTC--C----G----------GTA---AACTAT--------GAAA-----------------------------T--CT-ACAGCAA-G-TT-A
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6559730 32 +   6739814 CTC--T----T----------GCA---AGCCAT--------GAAA-----------------------------T--CT-ACAGTGG-G-TT-G
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      31207 32 +     60454 ctc--t----t----------gta---agccac--------gaaa-----------------------------t--ct-acagtgg-g-tt-g
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          6411 32 -     21101 ctc--t----t----------gca---agccat--------gaaa-----------------------------t--ct-acagtgg-g-tt-g
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         63721 32 -    107033 ctc--t----t----------gca---agccat--------gaaa-----------------------------t--ct-acagtgg-g-tt-g
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        6584 32 -     17608 ctc--t----t----------gca---agccat--------gaaa-----------------------------t--ct-gcagtgg-g-tt-g
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          3749 32 +     45019 ctc--t----t----------gca---agccat--------gaaa-----------------------------t--ct-gcagtgg-g-tt-g
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           4025 32 +     15177 ctc--t----c----------gca---agccat--------gaaa-----------------------------t--ct-gcagtgg-g-tt-g
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          6631 32 +     16677 ctc--t----t----------gca---agcctt--------gaaa-----------------------------t--ct-gcagtgg-g-tt-g
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           28821 32 +     35983 ctc--t----c----------gca---agccat--------gaaa-----------------------------t--ct-gcagtgg-g-tt-g
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11995352 32 +  12117833 ctc--t----t----------gca---agccat--------gaaa-----------------------------t--ct-gcagtgg-g-tt-g
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46482328 32 +  46592721 ctc--t----c----------gca---agccat--------gaaa-----------------------------t--ct-gcagtgg-g-tt-g
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                        445 32 -     27215 ctc--t----c----------gca---agccat--------gaaa-----------------------------t--ct-gcagtgg-g-tt-g
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       6645 32 +     35577 ctc--t----t----------gca---agccat--------gaaa-----------------------------t--ct-gcagtgg-g-tt-g
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        6439 32 -     25661 ctc--t----t----------gca---agccat--------gaaa-----------------------------t--ct-gcagtgg-g-tt-g
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        6611 32 -     17744 ctc--t----c----------aca---agccat--------gaaa-----------------------------t--ct-gcagtgg-g-tt-g
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        25980 32 +     37128 ctc--t----c----------gca---agccat--------gaaa-----------------------------t--ct-gcagtgg-g-tt-g
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           4943 32 -      6963 ttc--t----t----------gta---aactat--------gtaa-----------------------------t--ct-acagcaa-a-tt-a
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           63536 32 -     68416 ctc--t----g----------ggg---agctat--------gaaa-----------------------------t--ct-acagcaa-g-ta-a
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                           12656 32 +     13308 ctc--t----g----------ggg---agctat--------gaaa-----------------------------t--ct-acagcaa-g-ta-a
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             9825 32 -     18223 CTC--T----T----------ACA---AGCCAA--------GAAA-----------------------------T--CT-ACAGTGA-G-TT-A
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              1563 32 +    188999 CTC--T----T----------ACA---AGCCAA--------GAAA-----------------------------T--CT-ACAGTGG-G-TT-A
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           45862 32 +     57117 CTC--T----T----------ACA---AGCCAA--------GAAA-----------------------------T--CT-ACAGTGG-G-TT-A
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          50542 32 +     54541 CTC--T----T----------ACA---AGCCAA--------GAAA-----------------------------T--CT-ACAGTGA-G-TT-A
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15964735 32 +  43084221 ctt--t----t----------gca---caCCAT--------GAAA-----------------------------T--CT-CCAGCAA-T-CT-A
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         75343 32 +    196370 ctc--t----c----------aca---agccaa--------gaaa-----------------------------t--ct-acagtgg-g-tt-a
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          19524 32 +     40510 ctc--t----c----------aca---agccaa--------gaaa-----------------------------t--ct-acagtgg-g-tt-a
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15144165 32 -  15256731 ctc--t----t----------gta---agccat--------gaaa-----------------------------t--ct-acagtgg-g-tt-g
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      38629 32 -     53260 ctc--t----t----------gta---agccat--------gaaa-----------------------------t--ct-acagtgg-g-tt-g
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101149188 32 + 101219884 CTC--T----T----------GTA---AGCCAT--------GAAA-----------------------------T--CT-ACAGTGG-G-TT-G
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                19052 32 -     21363 ctc--t----g----------gta---agccat--------gtaa-----------------------------t--ct-acagcaa-a-tt-a
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           764356 32 +    964067 ctc--t----g----------gta---agccat--------gtaa-----------------------------t--ct-acagcaa-a-tt-a
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_629495              2602 31 -      3120 CTC--T----T----------TTA---ATCCAG--------AAAA-----------------------------T--TT-AT-GTAA-T-TC-A
i Chrysochloris_asiatica.ChrAsi_scaffold_629495         C 0 C 0
s Colobus_angolensis.KN983490.1                            283859 32 +    886210 CTC--T----T----------GTA---AGCCAT--------GAAA-----------------------------T--CT-ACAGCAA-G-TT-A
i Colobus_angolensis.KN983490.1                         C 0 C 0
s Colobus_guereza.LG08                                   96946748 32 - 156195979 ctc--t----t----------gta---agccat--------gaaa-----------------------------t--ct-acagcaa-g-tt-a
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_688201                               411 32 +      1908 ctc--t----t----------gta---agccat--------gaaa-----------------------------t--ct-acagcaa-g-tt-a
i Colobus_polykomos.k141_688201                         C 0 C 0
s Condylura_cristata.JH655880.1                          60622517 33 +  78930452 ctt--t----t----------gta---agCTAT--------GAAA-----------------------------T--CT-ATAGCAA-G-TTTG
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         2881 32 -      5782 aag--t----t----------gta---agctat--------gaaa-----------------------------t--ct-atagcaa-g-gt-t
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 283005 32 -    399297 CTC--T----T----------GAA---AGCTAA--------GAAA-----------------------------T--CT-ACAACAA-G-CT-A
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53035366 32 +  72327488 CTC--T----T----------GGA---AGCTAG--------GAAA-----------------------------T--CT-ATAGCAA-G-CT-A
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              2471 35 -     22648 CCC--A-CATT----------GTA---AACTAT--------GGAA-----------------------------T--TA-AAATCAA-T-TA-T
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            57863 33 -     70449 ctc--t----t----------gta---agctat--------gaaa-----------------------------t--ct-atagcaa-g-ttat
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  214621 32 -    956709 CTC--A----T----------GCA---AACCTG--------AAGA-----------------------------C--TC-ATGGCAA-G-CT-A
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 34703 32 -     67205 CTT--T----T----------GTT---CCCCAC--------AAAA-----------------------------T--GT-ACAGAAA-T-AT-A
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                21225 32 +     26546 CTT--T----T----------GCA---CCCCAT--------GAAA-----------------------------T--CC-ACTGCAA-T-CT-A
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             62364 31 -    236241 CTT--T----A----------GCA---CCACAC--------GA-A-----------------------------T--CT-ATTGCAA-T-CT-A
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          186004 31 -   6883506 ctc--t----t----------gta---aatcat--------gta------------------------------t--tt-acagcaa-a-tt-a
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16849487 33 +  31942871 ctc--t----t----------gca---agctat--------gaaa-----------------------------t--tctacagcaa-g-tt-a
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80041009 20 -  96802777 -------------------------------gt--------gaaa-----------------------------t--ct-acagcca-g-tt-a
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18701572 32 -  18957592 ctg--t----t----------gta---agCTAT--------GAAA-----------------------------T--CT-ACAGTGA-G-TT-A
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 326619 32 +    993696 ctc--t----g----------gta---agctat--------gaaa-----------------------------t--ct-acagcaa-g-tt-a
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   7251 32 +    151128 CTC--T----G----------GTA---AACTAT--------GAAA-----------------------------T--CT-ACAGCAA-G-TT-A
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   159990 31 +    228994 CTT--T----T----------GCA---C-CCAT--------GAAA-----------------------------T--CT-ACACCAG-T-TG-A
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3660660 25 +   4240102 CTC--T----T----------ACA---AGTCTT--------GAAT-----------------------------T--CT-ACAA----------
i Dipodomys_ordii.KN672545.1                            C 0 I 3
s Dipodomys_stephensi.DipSte_scaffold_84338                  3014 25 -     11986 CTC--T----T----------ACA---AGTCTT--------GAAT-----------------------------T--CT-ACAA----------
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 I 3
s Dolichotis_patagonum.DolPat_scaffold_14102                40941 30 -     73477 --T--T----T----------GCA---CCCCAT--------AAAA-----------------------------T--CT-ACTGCAG-T-TT-C
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           23000265 31 -  44670279 ctt--g----t----------ata---atccat--------gaaa-----------------------------c--ct-at-gtaa-t-tt-a
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1496598 32 +   1727528 CTC--T----A----------GTG---AGCTAT--------GAAA-----------------------------T--CT-ACAACTA-G-TT-A
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7834528 30 +  15467074 TGC--T----T----------GAA---ATCCAT---------AAA-----------------------------T--CT-GT-GTGA-A-TT-A
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        244168 32 -    369425 CTC--T----T----------GAA---ATCTAG--------AAAA-----------------------------T--CT-ATAGCAA-G-CT-A
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Enhydra_lutris.KZ291749.1                              85877835 31 +  99434291 -tc--t----c----------ata---agctgt--------gaat-----------------------------tgtc----aacaa-g-ttat
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4709324 32 +   6522550 CTG--T----T----------GTA---AATGAT--------GAAA-----------------------------T--AT-ACAGCAA-G-TT-A
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5856711 32 -   7175178 ctc--t----t----------gta---agctat--------gaaa-----------------------------t--ct-acagcaa-g-tt-g
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13355197 32 +  41866177 ctc--t----t----------gta---agctat--------gaaa-----------------------------t--ct-acagcaa-g-tt-g
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          16687 32 +     92910 ctc--t----t----------gta---agctat--------gaaa-----------------------------t--ct-acagcaa-g-tt-g
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11541637 35 +  16010500 ttt--c-tc-t----------tta---agctAT--------GAAA-----------------------------T--CT-GTATCAGGT-TA-G
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48781198 32 -  48907691 ctc--t----t----------gta---agccat--------gaaa-----------------------------t--ct-acagtgg-g-tt-g
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          319237 32 +    330699 CTC--T----T----------GAG---AGCTAT--------GAAA-----------------------------C--CT-ACAGCCA-G-TT-A
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             65694 32 +     89355 CTC--T----T----------GTG---AGCTAT--------GAAA-----------------------------T--CT-ACAGCCA-G-TT-A
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_59549                                732 26 +      1101 CTC--T----A----------GCG---AACTAT--------GAAA-----------------------------T--CT-ACAGC---------
i Eulemur_albifrons.k141_59549                          I 5 I 9
s Eulemur_collaris.k141_1015201                              2899 26 -      4292 CTC--T----A----------GGG---AGCTAT--------GAAA-----------------------------T--CT-ACAGC---------
i Eulemur_collaris.k141_1015201                         C 0 I 2
s Eulemur_coronatus.k141_3240342                            16036 26 +     36558 CTC--T----A----------GGG---AGCTAT--------GAAA-----------------------------T--CT-ACAGC---------
i Eulemur_coronatus.k141_3240342                        C 0 I 2
s Eulemur_flavifrons.k141_903901                            12358 26 +     60246 ctc--g----a----------gcg---aactat--------gaaa-----------------------------t--ct-acagc---------
i Eulemur_flavifrons.k141_903901                        C 0 I 2
s Eulemur_fulvus.k141_653297                                15843 26 +    109717 ctc--t----a----------ggg---agctat--------gaaa-----------------------------t--ct-acagc---------
i Eulemur_fulvus.k141_653297                            C 0 I 2
s Eulemur_macaco.k141_747087                                 3826 26 -     19505 CTC--T----A----------GCG---AACTAT--------GAAA-----------------------------T--CT-ACAGC---------
i Eulemur_macaco.k141_747087                            C 0 I 2
s Eulemur_mongoz.k141_825972                                20501 26 +     27497 CTT--T----A----------GGG---AGCTAT--------GAAA-----------------------------T--CT-ACAGC---------
i Eulemur_mongoz.k141_825972                            C 0 I 2
s Eulemur_rubriventer.k141_411740                           22957 26 +     26808 CTC--T----A----------GCG---AGCTAT--------GAAA-----------------------------T--CT-ACAGC---------
i Eulemur_rubriventer.k141_411740                       C 0 I 2
s Eulemur_rufus.k141_1620292                                37689 26 +     46535 CTC--T----A----------GCG---AACTAT--------GAAA-----------------------------T--CT-ACAGC---------
i Eulemur_rufus.k141_1620292                            C 0 I 2
s Eulemur_sanfordi.k141_186399                              20430 26 -     29447 CTC--T----A----------GGG---AGCTAT--------GAAA-----------------------------T--CT-ACAGC---------
i Eulemur_sanfordi.k141_186399                          C 0 I 2
s Felis_catus.CM001386.2                                129899304 33 - 159252932 ctc--t----c----------ata---agctac--------gaaa-----------------------------t--ct-acagcaa-g-ttat
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129286279 33 - 158578461 ctc--t----c----------ata---agctac--------gaaa-----------------------------t--ct-acagcaa-g-ttat
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 27378 33 +     52776 ctc--t----c----------ata---agctac--------gaaa-----------------------------t--ct-acagcaa-g-ttat
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13896510 32 -  19261668 CTC--C----T----------GCA---TCCCAT--------GAAA-----------------------------T--CT-ACAGCAA-T-CT-A
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     215674 20 -    847004 -------------------------------at--------gaaa-----------------------------t--ct-atagcaa-g-tt-a
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           18035 20 -     43889 -------------------------------at--------gaaa-----------------------------t--ct-atagcaa-g-tt-a
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          15179 20 +     27357 -------------------------------at--------gaaa-----------------------------t--ct-gtagcaa-g-tt-a
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               159938 29 +    324696 -----t----t----------aaa---agccat--------aaaa-----------------------------t--ct-acagcaa-g-tt-a
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    186375 32 -    189561 CTC--T----T----------GTG---AACTAT--------GAAA-----------------------------T--CT-ACAACTA-G-TT-A
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           16832 32 -     18683 CTT--G----T----------GTA---AGCCAT--------GAGC-----------------------------T--CT-ACAGCAA-G-CT-A
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_2641970                               603 32 +      9263 ctc--t----t----------gca---agccat--------gaaa-----------------------------t--ct-acagcaa-g-tt-a
i Gorilla_beringei.k141_2641970                         C 0 C 0
s Gorilla_gorilla.LT578340.1                             52344696 32 + 195582420 ctc--t----t----------gca---agccat--------gaaa-----------------------------t--ct-acagcaa-g-tt-a
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   80148 32 +    118900 ctc--t----t----------gta---agccat--------gaga-----------------------------c--ct-acagcaa-g-ct-a
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         6425 32 +     10286 ctc--t----a----------gcg---agctat--------gaaa-----------------------------t--ct-acagcaa-g-ta-a
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             4903 32 -     11661 ctc--t----a----------gcg---agctat--------gaaa-----------------------------t--ct-acagcaa-g-ta-a
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                            10230 32 +     56096 ctc--t----a----------gcg---agctat--------gaaa-----------------------------t--ct-acagcaa-g-ta-a
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        33479 32 -     42470 ctc--t----a----------gcg---agctat--------gaaa-----------------------------t--ct-acagcaa-g-ta-a
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        50102 32 -     54384 ctc--t----a----------gcg---agctat--------gaaa-----------------------------t--ct-acagcaa-g-ta-a
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              23003 31 +     53719 a----t----t----------gtg---agctat--------gaaa-----------------------------t--ct-atagcaa-g-ttat
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                33267 32 -     91191 CTC--C----T----------GTG---AGCTAT--------GAAA-----------------------------C--CT-ACAACTA-G-TT-A
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2561002 32 +  31725842 CTC--T----T----------GCA---CCCCAC--------GAAA-----------------------------T--CT-ACAGCAA-T-CT-A
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               63227 31 +     73687 ctc--t----t----------ata---atcttt--------gaag-----------------------------t--ct-gt-gtaa-t-tt-a
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              151027 32 +    277961 CTC--T----T----------GTG---AGCTAT--------GAAA-----------------------------T--CT-ACAGCCA-G-TT-A
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      283416 32 -    477199 ctg--t----t----------gta---agctat--------gaaa-----------------------------t--ct-agagcaa-g-tt-a
i Hipposideros_armiger.JXIK01001085.1                   C 0 I 7
s Hipposideros_galeritus.HipGal_scaffold_52959               1184 32 +     26078 ctg--t----t----------gta---agctat--------gaaa-----------------------------t--ct-agagcaa-g-tt-a
i Hipposideros_galeritus.HipGal_scaffold_52959          C 0 C 0
s Hoolock_leuconedys.ctg83                                  28460048 32 -  32676794 CTT--T----T----------GCA---AGCCAT--------GAAA-----------------------------T--CT-ACAGCAA-G-CT-A
i Hoolock_leuconedys.ctg83                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 23474 33 -     67322 CTC--T----C----------ATA---AGCTAT--------GAAA-----------------------------T--CT-ACAGCAA-G-TTAT
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           21607 25 -    119109 -----------------------A---CTGCAT--------AAAA-----------------------------G--CT-ACTGCAC-T-CT-A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_1816750                             2100 32 +      3202 TTC--T----T----------GCA---AGCCAT--------GAAA-----------------------------T--CC-ACAGTGG-G-TT-A
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1633646                              2070 32 -      2102 TTC--T----T----------GCA---AGCCAT--------GAAA-----------------------------T--CC-ACAGTGG-G-TT-A
i Hylobates_agilis.k141_1633646                         C 0 N 0
s Hylobates_klossii.k141_468230                              3589 32 +      5464 TTC--T----T----------GCA---AGCCAT--------GAAA-----------------------------T--CC-ACAGTGG-G-TT-A
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14628935 32 -  25970782 TTC--T----T----------GCA---AGCCAT--------GAAA-----------------------------T--CC-ACAGTGG-G-TT-A
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            1487 32 +      4161 TTC--T----T----------GCA---AGCCAT--------GAAA-----------------------------T--CC-ACAGTGG-G-TT-A
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             37797 32 -     60944 TTC--T----T----------GCA---AGCCAT--------GAAA-----------------------------T--CC-ACAGTGG-G-TT-A
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     9905 32 +     22540 CAC--T----T----------CCA---CACCAC--------GAAA-----------------------------T--CT-ACAGCAA-C-CT-A
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7130736 32 +  13083262 ctc--c----t----------gca---aactat--------gaaa-----------------------------t--ct-actgcaa-a-at-g
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   1948 30 +      3484 ctc--t----g----------gcg---agttat--------gaaa-----------------------------t--ct-acagcaa-g-t---
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              13225 32 +     17520 CTC--G----T----------GTG---AGCTAT--------GAAA-----------------------------T--CT-ACAGCCA-G-TT-A
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8578232 32 +  11848649 CTC--T----T----------ACA---AGCCAT--------GATA-----------------------------T--CT-AGGACAT-G-CT-A
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               27844 32 +     37189 CTC--T----C----------CTG---AGCTAT--------GAAA-----------------------------T--CT-ACAGCCA-G-TT-A
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          54383 32 -    147782 CTC--T----T----------ACA---AGCCAA--------GAAA-----------------------------T--CT-ACAGTGG-G-TT-A
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    5919 32 +     26176 CTG--T----T----------GTG---AACTAT--------GAAA-----------------------------T--AT-ACAGCAC-T-TT-A
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258411777 32 - 285822530 ctc--t----a----------gcg---agctat--------gaaa-----------------------------t--ct-acagcaa-g-ta-a
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        29086 32 +     39228 CTC--T----G----------GCA---AGCTAT--------GAAA-----------------------------T--CT-ACAGCAA-G-TA-A
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            58450 32 +     63517 CTC--T----G----------GCA---AGCTAT--------GAAA-----------------------------T--CT-ACAGCAA-G-TA-A
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        36830 32 -     38897 CTC--T----G----------GCA---AGCTAT--------GACA-----------------------------T--CT-ACAGCAA-G-TA-A
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      2876 32 -     13103 CTC--T----G----------GCA---AGCTAT--------GAAA-----------------------------T--CT-ACAGCAA-G-TA-A
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3091812 27 -   3498232 -tc--t----c------------a---aactat--------gaat-----------------------------t--c----tacaa-g-ttat
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    21229 32 +     22452 TTC--T----T----------GCA---AGCCAT--------GAAA-----------------------------T--CT-ACAGCAA-A-TT-A
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            140159 32 +   3060487 ctc--t----t----------gtg---agctat--------gaaa-----------------------------t--ct-acagcca-g-tt-a
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19252819 32 +  19376315 ctc--t----t----------gta---agccat--------gaaa-----------------------------t--ct-acagtgg-g-tt-g
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           15637 20 +     84689 -------------------------------at--------gaaa-----------------------------t--ct-atagcaa-g-tt-a
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3783375 20 +   6799190 -------------------------------at--------gaaa-----------------------------t--ct-atagcaa-g-tt-a
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20599151 26 -  62548349 ctc--t----t----------gta---atccat--------gaaa-----------------------------t--ct-at-gta--------
i Loxodonta_africana.GL010040.1                         C 0 I 2
s Lycaon_pictus.CM007556.1                               11095576 16 +  39895028 --------------------------------------------t-----------------------------t--ct-atcACAA-G-TGAT
i Lycaon_pictus.CM007556.1                              I 2 C 0
s Macaca_arctoides.k141_2201161                             24570 32 +     74745 CTC--T----T----------GCA---AGCCAT--------GAAA-----------------------------T--CT-GCAGTGG-G-TT-G
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12711031 32 +  12821369 CTC--T----T----------GCA---AGCCAT--------GAAA-----------------------------T--CT-GCAGTGG-G-TT-G
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                3604 32 -     26467 CTC--T----T----------GCA---AGCCAT--------GAAA-----------------------------T--CT-GCAGTGG-G-TT-G
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           51475 32 +     63263 CTC--T----T----------GCA---AGCCAT--------GAAA-----------------------------T--CT-GCAGTGG-G-TT-G
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 3585 32 -     26361 CTC--T----T----------GCA---AGCCAT--------GAAA-----------------------------T--CT-GCAGTGG-G-TT-G
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 6775 32 -      7381 CTC--T----T----------GCA---AGCCAT--------GAAA-----------------------------T--CT-GCAGTGG-G-TT-G
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  50004 32 -     79256 CTC--T----T----------GCA---AGCCAT--------GAAA-----------------------------T--CT-GCAGTGG-G-TT-G
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196040102 32 + 196197964 CTC--T----T----------GCA---AGCCAT--------GAAA-----------------------------T--CT-GCAGTGG-G-TT-G
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11450272 32 +  11645122 CTC--T----T----------GCA---AGCCAT--------GAAA-----------------------------T--CT-GCAGTGG-G-TT-G
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   8958 32 -     46448 CTC--T----T----------GCA---AGCCAT--------GAAA-----------------------------T--CT-GCAGTGG-G-TT-G
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                6621 32 -     13212 CTC--T----T----------GCA---AGCCAT--------GAAA-----------------------------T--CT-GCAGTGG-G-TT-G
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 20301 32 -     55006 CTC--T----T----------GCA---AGCCAT--------GAAA-----------------------------T--CT-GCAGTGG-G-TT-G
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43845416 32 +  43892939 CTC--T----T----------GCA---AGGCAT--------GAAA-----------------------------T--CT-GCAGTGG-G-TT-G
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               21585 32 -     24607 CTC--T----T----------GCA---AGCCAT--------GAAA-----------------------------T--CT-GCAGTGG-G-TT-G
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               8955 32 -     27140 CTC--T----T----------GCA---AGCCAT--------GAAA-----------------------------T--CT-GCAGTGG-G-TT-G
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43441991 32 -  43563597 ctc--t----t----------gta---agccat--------gaaa-----------------------------t--ct-acagtgg-g-tt-g
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4454795 32 -   4543643 ctc--t----t----------gta---agccac--------gaaa-----------------------------t--ct-acagtgg-g-tt-g
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            152543 34 +    252755 --C--T----T----------GGAAGAAAC---AAATTACTGTTA-----------------------------T--TG-ATTGCCT-------
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             40137 34 +     58827 --C--T----T----------GGAAGAAAC---AAATTACTGTTA-----------------------------T--TG-ATTGCCT-------
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36878605 32 +  64221397 ctc--c----t----------gca---aactat--------gaaa-----------------------------t--ct-actgcaa-a-at-g
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       65966 32 -    234502 ctc--t----t----------gtg---atctac--------gaaa-----------------------------t--ct-accgcaa-g-tt-a
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             6938 31 -     87323 -TC--T----C----------ATA---AGCTGT--------GAAT-----------------------------TGTC----AACAA-G-TTAT
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 1621 32 +    115071 CTC--T----T----------GAA---AGCTAG--------GAAA-----------------------------T--CT-GTATCAA-G-CT-A
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1051890 32 -  26018355 CTC--T----T----------GGA---AACTAG--------GAAA-----------------------------T--CT-ACAGCCA-G-CT-A
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    2816 32 -     12939 CTC--T----T----------GTG---AGCTAT--------GAAA-----------------------------T--CT-ACAGCCA-G-TT-A
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16514805 32 +  47401472 CTC--T----G----------GTA---AGCTAT--------GAAA-----------------------------T--CT-ACAGCAA-G-TA-A
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  41833 31 -     48017 ctc--a----t----------ata---atcgat--------gagg-----------------------------c--ct-at-gtaa-t-tt-a
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               25319 32 -     32043 CTG--T----T----------GCG---AGCTAT--------GAAA-----------------------------T--CT-ACAGAGA-G-TT-A
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22824965 32 -  98408828 CTC--T----T----------GAA---ATCCAG--------AAAA-----------------------------T--CT-ATAGTAA-G-CT-A
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8213372 32 +  10048721 ttg--t----t----------ata---cactgt--------gaca-----------------------------t--ct-acagcaa-g-tt-a
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            37863 32 +     45743 ttg--t----t----------ata---cgctgt--------gaca-----------------------------t--ct-acagcaa-g-tt-a
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         6537 32 +     29742 ctc--t----t----------gca---agccat--------gaaa-----------------------------t--ct-gcagtgg-g-tt-g
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        17308 27 -    104932 -tc--t----c------------a---aactat--------gaat-----------------------------t--c----tgcaa-g-ttat
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     5489 32 -     12809 ctc--t----g----------gta---agctat--------gaaa-----------------------------t--ct-acagcaa-g-ta-a
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 150602 20 +    154973 -------------------------------gt--------gaaa-----------------------------t--ct-acagcca-g-tt-a
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                163850 32 +    265003 ctg--t----t----------ata---agctat--------gaaa-----------------------------t--ct-acagcaa-g-tt-a
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  6616 32 -     19904 CTC--T----T----------GTG---AGCTAT--------GAAA-----------------------------T--CT-ATAACTA-G-TT-A
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  150678 33 -    168139 c--tct----t----------gtg---atctat--------gaaa-----------------------------t--ct-atagcaa-g-ttat
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          24780 32 -    100666 CTG--T----T----------GTA---AACTAT--------GAAA-----------------------------T--AT-ACAGCAG-G-TT-A
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.FMAL02028947.1                                    93 42 -      2058 ata--t----taaaaataaaaaaa---agctag--------GAAA-----------------------------T--CT-AAAGAAA-G-CT-A
i Mus_caroli.FMAL02028947.1                             n 32 I 6
s Mus_musculus.chr16                                     75494250 32 +  98207768 CTC--T----T----------AAA---AGCTAG--------GAAA-----------------------------T--CT-AGAGAAA-G-CT-A
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67561002 32 +  89017189 ATC--T----T----------GAA---AGCTAG--------GAAA-----------------------------T--CT-AGAGAAA-G-CT-A
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74336976 32 +  97876770 ATC--T----T----------AAA---AGCTAG--------GAAA-----------------------------T--CT-AGAGAAA-G-CT-A
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             15237 32 +     98495 ctc--t----t----------gta---agtcat--------gaga-----------------------------t--ct-acagcaa-g-ct-a
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4429044 31 -  28371801 -tc--t----c----------ata---agctgt--------gaat-----------------------------tgtc----aacaa-g-ttat
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     94205 32 -    117718 CTT--T----T----------GTT---CCCCAT--------GAAA-----------------------------A--GC-ACAGAAA-T-CT-A
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               971659 32 +   8389877 ctg--t----t----------gta---aactat--------gaaa-----------------------------t--at-acagcaa-g-tt-a
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5023079 32 +   6462685 ctg--t----t----------ata---aactat--------gaaa-----------------------------t--at-acagcaa-g-tt-a
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3469163 32 -   3747815 ctg--t----t----------gta---aactat--------gaaa-----------------------------t--at-acagcaa-g-tt-a
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        14404 32 +     66751 ctg--t----t----------gta---aactat--------gaaa-----------------------------t--at-acagcaa-g-tt-a
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             8019 32 -      8794 CTC--T----T----------GTA---AGGCAT--------GTAA-----------------------------T--GT-ACAGCCA-T-GT-A
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            240981 32 -    362372 CTC--C----T----------TCA---AGCCAG--------GAAC-----------------------------T--CT-TTAGGAA-G-CT-A
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_1382660                              4194 32 +      5784 ctc--t----t----------gta---agccat--------gaaa-----------------------------t--ct-acagcaa-g-tt-a
i Nasalis_larvatus.k141_1382660                         C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4490706 27 -  14209539 -tc--t----c------------a---aactat--------gaat-----------------------------t--c----tgcaa-g-ttat
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3955193 20 -   4490290 -------------------------------gt--------gaaa-----------------------------t--ct-acagcca-g-tt-a
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  50918 32 +     94413 ctt--t----t----------gca---agctag--------aaag-----------------------------t--ct-accgcaa-g-tt-a
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1526257                           6756 32 +     11411 CTT--T----T----------GCA---AGCCAT--------GAAA-----------------------------T--CT-ACAGCAA-G-CT-A
i Nomascus_annamensis.k141_1526257                      I 67 I 7
s Nomascus_concolor.k141_523891                              1256 32 +      1566 CTT--T----T----------GCA---AGCCAT--------GAAA-----------------------------T--CT-ACAGCAA-G-CT-A
i Nomascus_concolor.k141_523891                         C 0 C 0
s Nomascus_gabriellae.k141_989974                            6491 32 -     13151 CTT--T----T----------GCA---AGCCAT--------GAAA-----------------------------T--CT-ACAGCAA-G-CT-A
i Nomascus_gabriellae.k141_989974                       I 67 I 7
s Nomascus_siki_b.tarseq_44                          10087532 32 -  26722205 CTT--T----T----------GCA---AGCCAT--------GAAA-----------------------------T--CT-ACAGCAA-G-CT-A
i Nomascus_siki_b.tarseq_44                         C 0 C 0
s Nomascus_siki_a.k141_1166812                                  495 32 -      5137 CTT--T----T----------GCA---AGCCAT--------GAAA-----------------------------T--CT-ACAGCAA-G-CT-A
i Nomascus_siki_a.k141_1166812                            I 67 I 7
s Nyctereutes_procyonoides.CAJHUB010000786.1                38441 16 +   3668941 --------------------------------------------T-----------------------------T--CT-ATGACAA-G-TGAT
i Nyctereutes_procyonoides.CAJHUB010000786.1            I 2 C 0
s Nycticebus_bengalensis.LG16                            65572300 20 -  95554990 -------------------------------at--------gaaa-----------------------------t--ct-atagcaa-g-tt-a
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_771591                            15710 20 +     16181 -------------------------------AT--------GAAA-----------------------------T--CT-ATAGCAA-G-TT-A
i Nycticebus_coucang.k141_771591                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65680488 20 +  89412551 -------------------------------at--------gaaa-----------------------------t--ct-atagcaa-g-tt-a
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            5000274 31 -  23139505 TTC--T----T----------GCA---AGTCAC--------AATG-----------------------------T---T-ACAGCAA-A-TT-A
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3689693 32 +  10294119 ctt--t----t----------gtt---ccccAT--------GAAA-----------------------------T--GT-ATAGAAA-T-CT-A
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             685410 27 -   3126709 -tc--t----c------------a---aactat--------gaat-----------------------------t--c----tgcaa-g-ttat
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1084046 32 +   1425656 CTC--T----A----------GTG---AGCTAT--------AAAA-----------------------------T--CT-ACAACTA-G-TT-A
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         42116 32 +     78940 CTC--T----T----------GTG---AACTAT--------GAAA-----------------------------T--CT-ACAACTA-G-TT-A
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  130761 32 +    145789 CTC--T----T----------GAA---ATCTAG--------AAAA-----------------------------T--CT-ACAGCAA-G-CT-A
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  43461 32 +     62360 CTC--T----T----------GCA---AGCTAG--------GAAA-----------------------------T--CT-ACGGCAA-G-AT-A
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7228867 20 -   7562323 -------------------------------gt--------gaaa-----------------------------t--ct-acagcca-g-tt-a
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              64560 31 -     66828 tgc--t----t----------gta---atctat--------gaaa-----------------------------t--ct-at-gtaa-t-tt-a
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141884246 32 + 163896628 TTC--T----T----------GCA---AACCAT--------GAAA-----------------------------T--CT-ACAGCAA-A-TT-A
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      315579 16 -    505867 --------------------------------------------t-----------------------------t--ct-atgACAA-G-TGAT
i Otocyon_megalotis.JAEUCK010005121.1                   I 2 C 0
s Otolemur_crassicaudatus.k141_505435                        5536 20 -     53940 -------------------------------at--------gaaa-----------------------------t--ct-atagcaa-g-tt-a
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18013505 20 -  38779656 -------------------------------AT--------GAAA-----------------------------T--CT-ATAGCAA-G-TT-A
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134083053 32 - 275406953 ctc--t----t----------gtg---agctgt--------gaaa-----------------------------c--ct-acaacta-g-tt-a
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      84287 32 +    140051 CTC--C----T----------GTG---AGCTAT--------GAAA-----------------------------C--CT-ACAACTA-G-TT-A
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                                53339805 32 + 205426864 CTC--T----T----------GCA---ATCCAT--------GAAA-----------------------------T--CT-ACAGCAA-G-TT-A
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                             52442726 32 + 196562556 CTC--T----T----------GCA---ATCCAT--------GAAA-----------------------------T--CT-ACAGCAA-G-TT-A
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  40298 33 +    295523 ctc--t----c----------ata---agctac--------gaaa-----------------------------t--ct-acatcaa-g-ttat
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3644113 33 +  18214204 ctc--t----c----------ata---agctac--------gaaa-----------------------------t--ct-acagcaa-g-ttat
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5033761 33 -   6340057 ctc--t----c----------ata---agctac--------gaaa-----------------------------t--ct-acagcaa-g-ttat
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1071924 32 -   1292953 CTC--T----T----------GTG---AGCTAT--------GAAA-----------------------------C--CT-ACAACTA-G-TT-A
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188160780 32 - 188283584 CTC--T----T----------GTA---AGCCAT--------GAAA-----------------------------T--CT-ACAGTGG-G-TT-G
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              3870 32 +     25005 ctc--t----t----------gta---agccat--------gaaa-----------------------------t--ct-acagtgg-g-tt-g
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47518152 32 +  47705337 ctc--t----t----------gta---agccat--------gaaa-----------------------------t--ct-acagtgg-g-tt-g
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 72143 32 -    104429 ctc--t----t----------gta---agccat--------gaaa-----------------------------t--ct-acagtgg-g-tt-g
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   10675 32 +     14967 ctc--t----t----------gta---agccat--------gaaa-----------------------------t--ct-acagtgg-g-tt-g
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 6540 32 -      7628 ctc--t----t----------gta---agccat--------gaaa-----------------------------t--ct-acagtgg-g-tt-g
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    121780 33 -    135482 CTC--T----C----------ATG---AGCTAC--------AAAA-----------------------------T--CT-ACAGCAA-G-TTAT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          11200 20 -     23713 -------------------------------at--------gaaa-----------------------------t--ct-atagcaa-g-tt-a
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           12351 20 +     61070 -------------------------------at--------gaaa-----------------------------t--ct-atagcaa-g-tt-a
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       2640 24 +     49596 ATC--T----T----------AGA---AGCTTT--------GAA------------------------------T--CT-ACAG----------
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 I 3
s Peromyscus_maniculatus.KI615518.1                       4955825 32 -   8017169 CTC--T----T----------GCG---AGCCAG--------GAAA-----------------------------T--CT-ACAGCAA-G-CT-A
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              3334 20 +      8220 -------------------------------GT--------GAAA-----------------------------T--CT-ACAGCCA-G-TT-A
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Piliocolobus_badius.k141_512007                           29718 32 +     37672 ctc--t----t----------gta---agccat--------gaaa-----------------------------t--ct-acagcaa-g-tt-a
i Piliocolobus_badius.k141_512007                       C 0 C 0
s Piliocolobus_gordonorum.k141_736355                       29635 32 +     67079 ctc--t----t----------gta---agccat--------gaaa-----------------------------t--ct-acagcaa-g-tt-a
i Piliocolobus_gordonorum.k141_736355                   C 0 C 0
s Piliocolobus_kirkii.k141_451083                            4799 32 -     13367 CTC--T----T----------GTA---AGCCAT--------GAAA-----------------------------T--CT-ACAGCAA-G-TT-A
i Piliocolobus_kirkii.k141_451083                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000342.1                3428400 32 -   4356645 ctc--t----t----------gta---AGCCAT--------GAAA-----------------------------T--CT-ACAGCAA-G-TT-A
i Piliocolobus_tephrosceles.PDMG02000342.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            99940 32 +    112873 CTG--T----T----------GTA---AACTAT--------GAAA-----------------------------T--AT-ACAGCAA-G-TT-A
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           9800 32 +     21690 CTC--T----T----------GTG---AGCTAT--------GAAA-----------------------------T--CC-ACAGCCA-G-TT-A
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       26474 32 +     44506 CTC--T----T----------ACA---AGCCAA--------GAAA-----------------------------T--CT-ACAGTGG-G-TT-A
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        26687 32 +     67491 CTC--T----T----------ACA---AGCCAA--------GAAA-----------------------------T--CT-ACAGTGG-G-TT-A
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      16926 32 -     98129 CTC--T----T----------ACA---AGCCAA--------GAAA-----------------------------T--CT-ACAGTGG-G-TT-A
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     26527 32 +    147771 CTC--T----T----------ACA---AGCCAA--------GAAA-----------------------------T--CT-ACAGTGG-G-TT-A
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         3162 32 -     43940 CTC--T----T----------ACA---AGCCAA--------GAAA-----------------------------T--CT-ACAGTGG-G-TT-A
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          7245 32 -     55515 CTC--T----T----------ACA---AGCCAA--------GAAA-----------------------------T--CT-ACAGTGG-G-TT-A
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         26599 32 +    152463 CTC--T----T----------ACA---AGCCAA--------GAAA-----------------------------T--CT-ACAGTGG-G-TT-A
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       4407 32 -    119457 CTC--T----T----------ACA---AGCCAA--------GAAA-----------------------------T--CT-ACAGTGG-G-TT-A
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         16321 32 +    134592 CTC--T----T----------ACA---AGCCAA--------GAAA-----------------------------T--CT-ACAGTGG-G-TT-A
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          26909 32 -     75465 CTC--T----T----------ACA---AGCCAA--------GAAA-----------------------------T--CT-ACAGTGG-G-TT-A
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.CM009265.2                               104014493 32 - 193656255 CTC--T----T----------GCA---AGCCAT--------GAAA-----------------------------T--CT-ATAGGAA-G-TT-A
i Pongo_abelii.CM009265.2                               C 0 C 0
s Pongo_pygmaeus.ctg127                                   6237455 32 -   6432864 CTC--T----T----------GCA---AGCCAT--------GAAA-----------------------------T--CT-ATAGGAA-G-TT-A
i Pongo_pygmaeus.ctg127                                 C 0 C 0
s Presbytis_comata.k141_678168                              10925 32 +     11126 CTC--T----T----------GTA---AGCCAT--------GAAA-----------------------------T--CT-ACAGCAA-G-TT-G
i Presbytis_comata.k141_678168                          C 0 C 0
s Presbytis_mitrata.k141_1767317                            10914 32 +     15869 CTC--T----T----------GTA---AGCCAT--------GAAA-----------------------------T--CT-ACAGCAA-G-TT-G
i Presbytis_mitrata.k141_1767317                        C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                4333 31 -      9567 CTC--T----T----------ATA---ATCTTT--------GAAG-----------------------------T--CT-GT-GTAA-T-TT-A
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6853151 32 +  12164890 CTC--T----A----------GCG---AGCTAT--------GAAA-----------------------------T--CT-ACAGCAA-G-TA-A
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     21958 32 -     30946 NNN--N----N----------NNN---NNNNNN--------NNNN-----------------------------N--NN-NNNNNNN-N-NN-N
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         8235 32 +     11805 CTC--T----G----------GAG---AGTTAT--------GAAA-----------------------------T--CT-ACAGCAA-G-TA-A
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           47569 32 +     52369 CGC--T----G----------GTG---AGTTAT--------GAAA-----------------------------T--CT-ACAGCAA-G-TA-A
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         39956 32 -     44753 ctc--t----g----------gcg---agttat--------gaaa-----------------------------t--ct-acagcaa-g-ta-a
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            21879 32 +     27322 CTC--T----G----------GCG---AGTTAT--------GAAA-----------------------------T--CT-ACAGCAA-G-TA-A
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       21528 32 -     53241 CTC--T----G----------GAG---AGTTAT--------GAAA-----------------------------T--CT-ACAGCAA-G-TA-A
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         43791 32 -     48185 CTC--T----G----------GAG---AGTTAT--------GAAA-----------------------------T--CT-ACAGCAA-G-TA-A
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           38616 32 +     77221 CTC--T----T----------GAA---AGCTAG--------GAAA-----------------------------T--CT-ATATCAA-G-TT-A
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            6500 32 -     27784 ctg--t----t----------gta---agctat--------gaaa-----------------------------t--ct-acagcaa-g-tt-a
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        250691 31 -    344369 -TC--T----C----------ATA---AGCTGT--------GAAT-----------------------------TGTC----AACAA-G-TTAT
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Puma_concolor.QAVW01000427.1                          131540410 33 - 161321710 ctc--t----c----------ata---agctac--------aaaa-----------------------------t--ct-acagcaa-g-ttat
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_951151                              2951 32 -      8225 ctc--t----t----------gta---agccat--------gaaa-----------------------------t--ct-acagcaa-g-tt-a
i Pygathrix_cinerea.k141_951151                         C 0 C 0
s Pygathrix_nigripes_b.ctg25                                14340787 32 -  15297009 ctc--t----t----------gta---agccat--------gaaa-----------------------------t--ct-acagcaa-g-tt-a
i Pygathrix_nigripes_b.ctg25                               C 0 C 0
s Pygathrix_nigripes_a.k141_758202                             2968 32 -      8240 ctc--t----t----------gta---agccat--------gaaa-----------------------------t--ct-acagcaa-g-tt-a
i Pygathrix_nigripes_a.k141_758202                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                20911 32 +     68503 CTC--T----A----------GTG---AGCTAT--------AAAA-----------------------------T--CT-ACAACTA-G-TT-A
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13918039 28 +  90463843 ----------G----------AAA---AGCTAG--------GAAA-----------------------------T--CT-AAAGAAA-G-CT-A
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1792995 32 +   2252614 ctg--t----t----------gta---agctat--------gaaa-----------------------------t--ct-atagcaa-g-tt-a
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   152255250 32 - 206558726 CTC--T----T----------GTA---AGCCAT--------GAAA-----------------------------T--CT-ACAGCAA-G-TT-A
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg241                            462058 32 +   1472273 ctc--t----t----------gta---agccat--------gaaa-----------------------------t--ct-acagcaa-g-tt-a
i Rhinopithecus_strykeri.ctg241                         C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                      1322 32 -      4338 CTC--T----C----------ATG---AGCTAT--------GAAA-----------------------------C--CT-ACAACTA-G-TT-A
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15676931 32 -  43202129 CTC--T----T----------ACA---AGCCAA--------GAAA-----------------------------T--CT-ACAGTGG-G-TT-A
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        8844 32 +     34089 CTC--T----T----------ACA---AGCCAA--------GAAA-----------------------------T--CT-ACAGTGG-G-TT-A
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              8784 32 -     60842 CTC--T----T----------ACA---AGCCAA--------GAAA-----------------------------T--CT-ACAGTGG-G-TT-A
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              8878 32 +     67014 CTC--T----T----------ACA---AGCCAA--------GAAA-----------------------------T--CT-ACAGTGG-G-TT-A
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              8855 32 +     60816 CTC--T----T----------ACA---AGCCAA--------GAAA-----------------------------T--CT-ACAGTGG-G-TT-A
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 8792 32 -     76454 CTC--T----T----------ACA---AGCCAA--------GAAA-----------------------------T--CT-ACAGTGG-G-TT-A
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17345577 32 -  30362882 ctc--t----t----------aca---agccaa--------ggaa-----------------------------t--ct-acagtgg-g-tt-a
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         24898 32 -     62485 ctc--t----t----------aca---agccaa--------ggaa-----------------------------t--ct-acagtgg-g-tt-a
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   39993 30 -    114521 CTC--T----T----------GTA---AACT----------GAAA-----------------------------T--CT-ATAGCAA-A-TT-G
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1743075                       45496 32 +     45790 CTC--T----T----------GTA---AGCCAT--------GAAA-----------------------------T--CT-ACAGCAA-G-TT-A
i Semnopithecus_entellus.k141_1743075                   C 0 C 0
s Semnopithecus_hypoleucos.k141_2141024                      1269 32 -      8815 CTC--T----T----------GTA---AGCCAT--------GAAA-----------------------------T--CT-ACAGCAA-G-TT-A
i Semnopithecus_hypoleucos.k141_2141024                 C 0 C 0
s Semnopithecus_johnii.k141_1300894                          1286 32 +     13764 CTC--T----T----------GTA---AGCCAT--------GAAA-----------------------------T--CT-ACAGCAA-G-TT-A
i Semnopithecus_johnii.k141_1300894                     C 0 C 0
s Semnopithecus_priam.k141_368201                           10025 32 -     20692 CTC--T----T----------GTA---AGCCAT--------GAAA-----------------------------T--CT-ACAGCAA-G-TT-A
i Semnopithecus_priam.k141_368201                       C 0 C 0
s Semnopithecus_schistaceus.k141_628310                     45570 32 -     53123 CTC--T----T----------GTA---AGCCAT--------GAAA-----------------------------T--CT-ACAGCAA-G-TT-A
i Semnopithecus_schistaceus.k141_628310                 C 0 C 0
s Semnopithecus_vetulus.k141_748269                          4624 32 +     17284 CTC--T----T----------GTA---AGCCAT--------GAAA-----------------------------T--CT-ACAGCAA-G-TT-A
i Semnopithecus_vetulus.k141_748269                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  105823 32 -    120886 CTC--T----T----------GAA---AGCTAG--------AAAA-----------------------------T--CT-ACAGCAA-G-CC-A
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            23954 22 +    739146 CTC--A----T----------GTT---AACTAG--------GAAA-----------------------------T--TT-A-------------
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 I 2
s Sorex_araneus.JH798170.1                               17774174 35 -  27805282 CCC--TCCT-T----------GGA---AACTAT--------GAAA-----------------------------T--TA-GCAGCAA-T-TA-T
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2244438 32 +   2842873 ctc--c----t----------gca---aactat--------gaaa-----------------------------t--ct-ACTGCAA-A-AT-G
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             239481 31 -    276980 -cc--t----c----------ata---aactgt--------gaat-----------------------------tatc----aacaa-g-ttat
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            33595 31 +     62062 a----t----t----------ggg---agctat--------gaaa-----------------------------t--ct-atagcaa-g-ttat
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189275385 29 + 218635234 CTC--T----T----------GTG---AACT----------GAAA-----------------------------T--CC--TAGCCA-T-CT-A
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_190                     4045925 32 -  10168602 ctt--t----t----------gca---agccat--------gaaa-----------------------------t--ct-acagcaa-g-ct-a
i Symphalangus_syndactylus.tarseq_190                   I 63 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                2728 32 +     20549 cta--t----t----------ata---agctat--------gaaa-----------------------------t--ct-acagcaa-g-tt-a
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               17692 32 +     45698 CTC--T----T----------GTA---AGGCAT--------GTAA-----------------------------T--GT-ACAGCCA-T-GT-A
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      811197 32 +   1148477 ctc--t----t----------gcg---agctat--------gaaa-----------------------------t--ct-acagcaa-g-tt-a
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  61839 32 +     99546 CTC--T----T----------GCG---AGCTAT--------GAAA-----------------------------T--CT-ACAGCAA-G-TT-A
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194012313 32 - 194193292 CTC--T----T----------GTA---AGCCAT--------GAAA-----------------------------T--CT-ACAGTGG-G-TT-G
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                   783 32 -      3104 ctc--t----t----------gta---aaccat--------gtaa-----------------------------t--ct-acagcaa-a-tt-a
i Tolypeutes_matacus.TolMat_scaffold_475685             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  138496 32 -    259118 ctg--t----t----------gta---agctat--------gaaa-----------------------------t--ct-acagcaa-g-tt-a
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_672638                         4869 32 +     38635 CTC--T----T----------GTA---AGCCAT--------GAAA-----------------------------T--CT-ACAGCAA-G-TT-A
i Trachypithecus_auratus.k141_672638                    C 0 C 0
s Trachypithecus_crepusculus.k141_863597                     4862 32 -     23436 CTC--T----T----------GTA---AGCCAT--------GAAA-----------------------------T--CT-ACAGCAA-G-TT-A
i Trachypithecus_crepusculus.k141_863597                C 0 C 0
s Trachypithecus_cristatus.k141_968903                      32511 32 +     43409 CTC--T----T----------GTA---AGCCAT--------GAAA-----------------------------T--CT-ACAGCAA-G-TT-A
i Trachypithecus_cristatus.k141_968903                  C 0 C 0
s Trachypithecus_francoisi.k141_1012484                       795 32 +      8809 CTC--T----T----------GTA---AGCCAT--------GAAA-----------------------------T--CT-ACAGCAA-G-TT-A
i Trachypithecus_francoisi.k141_1012484                 C 0 C 0
s Trachypithecus_geei.k141_137495                           30024 32 -     42322 ctc--t----t----------gta---agccat--------gaaa-----------------------------t--ct-acagcaa-g-tt-a
i Trachypithecus_geei.k141_137495                       C 0 C 0
s Trachypithecus_germaini.k141_240878                        4989 32 -     24955 CTC--T----T----------GTA---AGCCAT--------GAAA-----------------------------T--CT-ACAGCAA-G-TT-A
i Trachypithecus_germaini.k141_240878                   C 0 C 0
s Trachypithecus_hatinhensis.k141_641377                     1160 32 +      1365 CTC--T----T----------GTA---AGCCAT--------GAAA-----------------------------T--CT-ACAGCAA-G-TT-A
i Trachypithecus_hatinhensis.k141_641377                C 0 C 0
s Trachypithecus_laotum.k141_897381                         45564 32 -     53586 CTC--T----T----------GTA---AGCCAT--------GAAA-----------------------------T--CT-ACAGCAA-G-TT-A
i Trachypithecus_laotum.k141_897381                     C 0 C 0
s Trachypithecus_leucocephalus.k141_352489                   1135 32 +      9423 CTC--T----T----------GTA---AGCCAT--------GAAA-----------------------------T--CT-ACAGCAA-G-TT-A
i Trachypithecus_leucocephalus.k141_352489              C 0 C 0
s Trachypithecus_melamera.k141_950981                        2150 32 -      3512 CTC--T----T----------GTA---AGCCAT--------GAAA-----------------------------T--CT-ACAGCAA-G-TT-A
i Trachypithecus_melamera.k141_950981                   C 0 C 0
s Trachypithecus_obscurus.k141_588024                        4874 32 +      4963 CTC--T----T----------GTA---AGCCAT--------GAAA-----------------------------T--CT-ACAGCAA-G-TT-A
i Trachypithecus_obscurus.k141_588024                   C 0 C 0
s Trachypithecus_phayrei.ctg364                            232373 32 -   1198723 ctc--t----t----------gta---agccat--------gaaa-----------------------------t--ct-acagcaa-g-tt-a
i Trachypithecus_phayrei.ctg364                         C 0 C 0
s Trachypithecus_pileatus.k141_532233                       30044 32 -     40754 ctc--t----t----------gta---agccat--------gaaa-----------------------------t--ct-acagcaa-g-tt-a
i Trachypithecus_pileatus.k141_532233                   C 0 C 0
s Trichechus_manatus.JH594618.1                          16090225 31 +  31416278 ctc--t----t----------gta---atctat--------gaaa-----------------------------t--ct-at-gtaa-t-tt-a
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2801472 61 -   3938065 CTT--T----T----------GCA---GGCCAC--------TAACAGTACCTTAGTAAGTACCTCAACAGTACTT--TA-ACAGTAC-C-TT-A
i Tupaia_chinensis.KB320831.1                           I 3316 C 0
s Tupaia_tana.TupTan_flattened_line_68454                   10089 61 +     13056 CTT--T----T----------GCA---GGCCAC--------TAACAGTACCTTCGTAAGTACCTCAACAGTACTT--TA-GCAGTAC-C-TT-A
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69317596 21 -  96451834 -------------------------------gt--------gaaa-----------------------------t--ct-acagcca-gatt-a
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                     447 32 +    136657 ATC--T----T----------ATA---AACTAT--------GAAA-----------------------------T--AA-CCAGCAA-G-CT-T
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 C 0
s Ursus_maritimus.KK498671.1                              6521113 32 +  28682327 ttc--t----c----------ata---aactgt--------gaat-----------------------------tctc----aacaa-g-ttat
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  9793 32 -     20643 ctc--t----a----------gcg---agctat--------gaaa-----------------------------t--ct-acagcaa-g-ta-a
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             29328 32 -     33872 ctc--t----a----------gcg---agctat--------gaaa-----------------------------t--ct-acagcaa-g-ta-a
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1528625 32 -   2331223 ctc--t----t----------ttg---agctat--------gaag-----------------------------t--ct-attccta-g-tt-a
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                144806 16 -    281493 --------------------------------------------T-----------------------------T--CT-ATGACAA-G-TGAT
i Vulpes_lagopus.VulLag_flattened_line_2045             I 2 C 0
s Xerus_inauris.XerIna_scaffold_7898                       131927 32 -    134049 CTC--C----T----------GCA---AGCTAC--------AAAA-----------------------------T--CT-GTAGCAA-A-TT-G
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        220267 27 -    227762 -tc--t----c------------a---aactat--------gaat-----------------------------t--c----tgcaa-g-ttat
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_256618                     1691 32 -      2259 ctc--t----t----------aaa---tgtcat--------gaaa-----------------------------t--ct-ACCACAA-G-CT-G
i Zapus_hudsonius.ZapHud_scaffold_256618                I 415 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            2324 32 -     13665 CTC--T----T----------GTG---AGCTAT--------GAAA-----------------------------T--CT-ACAGCCA-G-TT-A
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Petromus_typicus.PetTyp_scaffold_33007                    17492  0 -     36578 C
e Tragulus_javanicus.TraJav_scaffold_14717                   9488 743 +     90398 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Tarsius_wallacei.k141_48636                               64696  0 +     65473 C
e Tarsius_lariang.k141_609102                               31387  0 +     42269 C
e Rhinopithecus_bieti.k119_554384                            2917  0 -     17045 C
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Cephalopachus_bancanus.k141_702587                        12545  0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530  0 +    345090 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               17947  7 +    209709 GT-------GGAT--A
s Acinonyx_jubatus.LLWD01000356.1                         2039917  6 +   3721120 ga--------act--c
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    118259  6 -    189883 GT-------G-TT--G
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10663877  6 +  23371972 ga--------acc--c
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7100403  6 -  16596857 GA--------ACC--C
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_141108                   1252  6 -      7259 AT-------G-AT--A
i Allactaga_bullata.AllBul_scaffold_141108              C 0 I 399
s Allenopithecus_nigroviridis.k141_2469532                   5821  7 -     60446 GT-------GAAC--A
i Allenopithecus_nigroviridis.k141_2469532              C 0 I 30
s Allochrocebus_lhoesti.k141_3566948                         6538  7 -     29318 gt-------gaac--a
i Allochrocebus_lhoesti.k141_3566948                    C 0 I 31
s Allochrocebus_preussi.k141_1108977                         5476  7 +     38766 gt-------gaac--a
i Allochrocebus_preussi.k141_1108977                    C 0 I 30
s Allochrocebus_solatus.k141_371672                          6432  7 -     80423 gt-------gaac--a
i Allochrocebus_solatus.k141_371672                     C 0 I 31
s Alouatta_belzebul.k141_276091                              1416  7 +     19852 gt-------gaac--a
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                3660  7 -     12443 gt-------gaac--a
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                              959  7 +      5070 gt-------gaac--a
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                  704  7 -      1641 gt-------gaac--a
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          3443  7 -     24210 gt-------gaac--a
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           30025  7 -     30219 gt-------gaac--a
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_405616                              5861  7 +     16794 gt-------gaac--a
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                             993  7 -      1470 gt-------gaac--a
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             5138  7 -      9835 gt-------gaac--a
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3525950  6 +   4113121 GT--------GAA--C
i Ammotragus_lervia.NIVO01013474.1                      C 0 I 1
s Anoura_caudifer.AnoCau_scaffold_422                      392969  7 -    631301 GT--------GAA-CC
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             3383  6 +     55446 GT--------GAA--C
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 I 1
s Aotus_azarae.k141_3170768                                 66747  7 +     78111 gt-------caac--a
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            9695  7 +     22701 GT-------AAAC--A
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5753652  7 +   9889416 GT-------AAAC--A
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                            10251  7 -    104377 gt-------aaac--a
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                              10258  7 +     23246 gt-------aaac--a
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     2787  7 +     11424 TT-------GAAT--A
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        6847  7 +      9265 gt-------gaac--a
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                11378  7 -     29036 GT--------GAA-CC
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9543546  7 +  39197703 gt-------gaac--a
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             64820  7 +     85812 gt-------gaac--a
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                15833  7 +     89302 gt-------gaac--a
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             20334  7 -     58268 gt-------gaac--a
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             68328  7 +    119057 gt-------gaac--a
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              10297  7 -     25888 gt-------gaac--a
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                11359  7 -     16375 gt-------gaac--a
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               4975  7 +      6337 gt-------gaac--a
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26384426  6 +  51448160 gt--------gaa--c
i Balaenoptera_acutorostrata.KI537095.1                 C 0 I 1
s Balaenoptera_bonaerensis.DF502048.1                        9599  6 -     13118 gt--------gaa--c
i Balaenoptera_bonaerensis.DF502048.1                   C 0 I 1
s Beatragus_hunteri.BeaHun_scaffold_21644                   48414  6 -     72089 GT--------GAA--G
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 I 1
s Bison_bison.KN264915.1                                   302553  6 -   6870073 GT--------GAA--C
i Bison_bison.KN264915.1                                C 0 I 1
s Bos_indicus.CM003021.1                                 22956651  6 + 161108492 GT--------GAA--C
i Bos_indicus.CM003021.1                                C 0 I 1
s Bos_mutus.JH883513.1                                     418892  6 +    998990 GT--------GAA--C
i Bos_mutus.JH883513.1                                  C 0 I 1
s Bos_taurus.CM000177.6                                  22665305  6 + 158972876 GT--------GAA--C
i Bos_taurus.CM000177.6                                 C 0 I 1
s Bubalus_bubalis.KI419065.1                               675242  6 +   1914593 gt--------gaa--C
i Bubalus_bubalis.KI419065.1                            I 178 I 1
s Cacajao_ayresi.k141_724503                               118196  7 -    171031 gt-------gaac--a
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 17216  7 +    125063 gt-------gaac--a
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                19263  7 -    216513 gt-------gaac--a
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       11806  7 -    134917 gt-------gaac--a
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3223549  6 -   8989139 GT--------AAA--C
i Camelus_bactrianus.KN276303.1                         C 0 I 1
s Camelus_dromedarius.KN271192.1                           401250  6 -  15254737 GT--------AAA--C
i Camelus_dromedarius.KN271192.1                        C 0 I 1
s Camelus_ferus.KB016973.1                                2976987  6 +   6889770 GT--------AAA--C
i Camelus_ferus.KB016973.1                              C 0 I 1
s CanFam4.chr31                                          11526742  6 +  39901454 GA--------ATG--C
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   21716  6 +     87036 GA--------ATG--C
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11273425  6 -  35597290 GA--------ATG--C
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11096136  6 +  39895921 GA--------ATG--C
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16462921  6 -  44759192 GA--------ATG--C
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21333894  6 + 157394656 GT--------GAA--C
i Capra_aegagrus.CM003214.1                             C 0 I 1
s Capra_hircus.CM004562.1                               135712249  6 - 157403528 GT--------GAA--C
i Capra_hircus.CM004562.1                               C 0 I 1
s Capromys_pilorides.CapPil_scaffold_529800                   615  7 -      2320 TT-------GAAT--A
i Capromys_pilorides.CapPil_scaffold_529800             C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               62392  7 +     67245 gt--------gaa-cc
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_1326                      378  7 -    202837 GT-------AAAT--A
i Castor_canadensis.CasCan_scaffold_1326                I 3 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   163060  6 -    276539 GT--------GAA--C
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 I 1
s Cavia_aperea.AVPZ01000278.1                            15790074  7 -  24422027 TT-------GACT--A
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15802013  7 -  24440124 TT-------GACT--A
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       180185  7 +    436027 TT-------GACT--A
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18895921  7 -  29618158 gt-------gaat--a
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                12571  7 -     26817 gt-------gaat--a
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                16815  7 +     25043 gt-------gaat--a
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4367995  7 +   7569818 at--------gaa-tc
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         7752  7 -      9338 AT--------GAA-TC
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6559762  7 +   6739814 GT-------GAAC--A
i Cercocebus_atys.KQ010443.1                            C 0 I 30
s Cercocebus_chrysogaster.k141_2328246                      31239  7 +     60454 gt-------gaac--a
i Cercocebus_chrysogaster.k141_2328246                  C 0 I 31
s Cercocebus_lunulatus.k141_4634644                          6443  7 -     21101 gt-------gaac--a
i Cercocebus_lunulatus.k141_4634644                     C 0 I 30
s Cercocebus_torquatus.k141_3969582                         63753  7 -    107033 gt-------gaac--a
i Cercocebus_torquatus.k141_3969582                     C 0 I 30
s Cercopithecus_ascanius.k141_4123525                        6616  7 -     17608 gt-------gaac--a
i Cercopithecus_ascanius.k141_4123525                   C 0 I 31
s Cercopithecus_cephus.k141_3893260                          3781  7 +     45019 gt-------gaac--a
i Cercopithecus_cephus.k141_3893260                     C 0 I 30
s Cercopithecus_diana.k141_2561715                           4057  7 +     15177 gt-------gaac--a
i Cercopithecus_diana.k141_2561715                      C 0 I 30
s Cercopithecus_hamlyni.k141_129805                          6663  7 +     16677 gt-------gaac--a
i Cercopithecus_hamlyni.k141_129805                     C 0 I 31
s Cercopithecus_lowei.k141_623764                           28853  7 +     35983 gt-------gaac--a
i Cercopithecus_lowei.k141_623764                       C 0 I 31
s Cercopithecus_albogularis.ctg51                              11995384  7 +  12117833 gt-------gaac--a
i Cercopithecus_albogularis.ctg51                             C 0 I 31
s Cercopithecus_mona.ctg12                               46482360  7 +  46592721 gt-------gaac--a
i Cercopithecus_mona.ctg12                              C 0 I 30
s Cercopithecus_neglectus.k141_2169300                        477  7 -     27215 gt-------gaac--a
i Cercopithecus_neglectus.k141_2169300                  C 0 I 30
s Cercopithecus_nictitans.k141_1129315                       6677  7 +     35577 gt-------gaac--a
i Cercopithecus_nictitans.k141_1129315                  C 0 I 30
s Cercopithecus_petaurista.k141_64532                        6471  7 -     25661 gt-------gaac--a
i Cercopithecus_petaurista.k141_64532                   C 0 I 30
s Cercopithecus_pogonias.k141_3109732                        6643  7 -     17744 gt-------gaac--a
i Cercopithecus_pogonias.k141_3109732                   C 0 I 42
s Cercopithecus_roloway.k141_2263608                        26012  7 +     37128 gt-------gaac--a
i Cercopithecus_roloway.k141_2263608                    C 0 I 31
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           4975  5 -      6963 tt-------gaa----
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           63568  7 -     68416 gt-------gaac--a
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                           12688  7 +     13308 gt-------gaac--a
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             9857  7 -     18223 GT-------GAAC--A
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              1595  7 +    188999 GT-------GAAC--A
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           45894  7 +     57117 GT-------GAAC--A
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          50574  7 +     54541 GT-------GAAC--A
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15964767  7 +  43084221 CT-------GAAT--A
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         75375  7 +    196370 gt-------gaac--a
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          19556  7 +     40510 gt-------gaac--a
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15144197  7 -  15256731 gt-------gaac--a
i Chlorocebus_aethiops.ctg22                            C 0 I 30
s Chlorocebus_pygerythrus.k141_1486215                      38661  7 -     53260 gt-------gaac--a
i Chlorocebus_pygerythrus.k141_1486215                  C 0 I 42
s Chlorocebus_sabaeus.CM001963.2                        101149220  7 + 101219884 GT-------GAAC--A
i Chlorocebus_sabaeus.CM001963.2                        C 0 N 0
s Choloepus_didactylus.ChoDid_scaffold_36182                19084  7 -     21363 gt-------gaaa--t
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           764388  7 +    964067 gt-------gaaa--t
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_629495              2633  7 -      3120 GT-------AA--ACT
i Chrysochloris_asiatica.ChrAsi_scaffold_629495         C 0 C 0
s Colobus_angolensis.KN983490.1                            283891  7 +    886210 GC-------GAAA--A
i Colobus_angolensis.KN983490.1                         C 0 C 0
s Colobus_guereza.LG08                                   96946780  7 - 156195979 gc-------gaaa--a
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_688201                               443  7 +      1908 gc-------gaaa--a
i Colobus_polykomos.k141_688201                         C 0 C 0
s Condylura_cristata.JH655880.1                          60622550  6 +  78930452 GT-------G-AG--C
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         2913  7 -      5782 at--------gaa-cc
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 283037  6 -    399297 GT-------G-TC--A
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53035398  6 +  72327488 GT-------G-CC--A
i Cricetulus_griseus.LT883672.1                         C 0 I 6
s Crocidura_indochinensis.CroInd_scaffold_27484              2506  6 -     22648 TT-------A-AC--C
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            57896  6 -     70449 ga--------act--c
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  214653  7 -    956709 GT-------GAGT--A
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 34735  7 -     67205 TT-------GAAT--T
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                21257  7 +     26546 TT-------GAGT--G
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             62395  7 -    236241 TT-------GAAC--A
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          186035  5 -   6883506 at-------gaa----
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16849520  7 +  31942871 gt-------gaac--a
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80041029  6 -  96802777 gt--------gaa--t
i Delphinapterus_leucas.KZ290064.1                      C 0 I 1
s Desmodus_rotundus.KZ672188.1                           18701604  7 -  18957592 GC--------GAA-CC
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 326651  7 +    993696 at--------gaa-cc
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   7283  7 +    151128 AT--------GAA-TC
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   160021  7 +    228994 CT-------GAAT--A
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3660688  7 +   4240102 GG-------GAAT--A
i Dipodomys_ordii.KN672545.1                            I 3 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  3042  7 -     11986 GG-------GAAT--A
i Dipodomys_stephensi.DipSte_scaffold_84338             I 3 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                40971  7 -     73477 TT-------GACT--A
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           23000296  7 -  44670279 tt-------ga--gcc
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1496630  6 +   1727528 GA--------GAA--A
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 I 1
s Ellobius_lutescens.LOEQ01003611.1                        244200  6 -    369425 AT-------G-CC--A
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Enhydra_lutris.KZ291749.1                              85877866  6 +  99434291 ga--------acc--c
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4709356  7 +   6522550 GT--------GAA-CC
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5856743  7 -   7175178 gt--------gaa-cc
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13355229  7 +  41866177 gt--------gaa-cc
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          16719  7 +     92910 gt--------gaa-cc
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11541672  6 +  16010500 TG-------A-CT--C
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48781230  7 -  48907691 gt-------gaac--a
i Erythrocebus_patas.Contig8                            C 0 I 30
s Eschrichtius_robustus.EscRob_flattened_line_685          319269  6 +    330699 GT--------GAA--C
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 I 1
s Eubalaena_japonica.EubJap_flattened_line_7756             65726  6 +     89355 GT--------GAA--C
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 I 1
s Eulemur_albifrons.k141_715837                              9668  7 +     13586 GT-------GAAC--A
i Eulemur_albifrons.k141_715837                         I 28 I 30
s Eulemur_collaris.k141_1015201                              2927  7 -      4292 GT-------GAAC--A
i Eulemur_collaris.k141_1015201                         I 2 C 0
s Eulemur_coronatus.k141_3240342                            16064  7 +     36558 GT-------GAAC--A
i Eulemur_coronatus.k141_3240342                        I 2 C 0
s Eulemur_flavifrons.k141_903901                            12386  7 +     60246 gt-------gaac--a
i Eulemur_flavifrons.k141_903901                        I 2 C 0
s Eulemur_fulvus.k141_653297                                15871  7 +    109717 gt-------gaac--a
i Eulemur_fulvus.k141_653297                            I 2 C 0
s Eulemur_macaco.k141_747087                                 3854  7 -     19505 GT-------GAAC--A
i Eulemur_macaco.k141_747087                            I 2 C 0
s Eulemur_mongoz.k141_825972                                20529  7 +     27497 GT-------GAAC--A
i Eulemur_mongoz.k141_825972                            I 2 C 0
s Eulemur_rubriventer.k141_411740                           22985  7 +     26808 GT-------GAAC--A
i Eulemur_rubriventer.k141_411740                       I 2 C 0
s Eulemur_rufus.k141_1620292                                37717  7 +     46535 GT-------GAAC--A
i Eulemur_rufus.k141_1620292                            I 2 C 0
s Eulemur_sanfordi.k141_186399                              20458  7 -     29447 GT-------GAAC--A
i Eulemur_sanfordi.k141_186399                          I 2 C 0
s Felis_catus.CM001386.2                                129899337  6 - 159252932 ga--------act--c
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129286312  6 - 158578461 ga--------act--c
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 27411  6 +     52776 ga--------act--c
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13896542  7 -  19261668 TT-------GAAT--A
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     215694  7 -    847004 gt-------gaac--a
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           18055  7 -     43889 gt-------gaac--a
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          15199  7 +     27357 gt-------gaac--a
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               159967  7 +    324696 gt-------gaac--a
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    186407  6 -    189561 AT--------GAA--C
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 I 1
s Glis_glis.GliGli_scaffold_79770                           16864  7 -     18683 GG-------GAAT--A
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_2641970                               635  7 +      9263 gt-------gaat--a
i Gorilla_beringei.k141_2641970                         C 0 C 0
s Gorilla_gorilla.LT578340.1                             52344728  7 + 195582420 gt-------gaat--a
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   80180  7 +    118900 gg-------aaat--a
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         6457  7 +     10286 gt-------gaac--c
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             4935  7 -     11661 gt-------gaac--c
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                            10262  7 +     56096 gt-------gaag--c
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        33511  7 -     42470 gt-------gaac--c
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        50134  7 -     54384 gt-------gaac--c
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              23034  6 +     53719 ga--------act--c
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                33299  6 -     91191 GT--------GAA--C
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 I 1
s Heterocephalus_glaber.JH602058.1                        2561034  7 +  31725842 AT-------GAAT--A
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               63258  7 +     73687 gt-------gagc--c
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              151059  6 +    277961 GT--------GAA--C
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 I 1
s Hipposideros_armiger.JXIK01001052.1                      277522  7 -    479840 gt--------gaa-cc
i Hipposideros_armiger.JXIK01001052.1                   I 152 I 56
s Hipposideros_galeritus.HipGal_scaffold_52959               1216  7 +     26078 gt--------gaa-cc
i Hipposideros_galeritus.HipGal_scaffold_52959          C 0 I 21
s Hoolock_leuconedys.ctg83                                  28460080  7 -  32676794 GT-------GAAT--A
i Hoolock_leuconedys.ctg83                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 23507  6 -     67322 GA--------AGT--C
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           21632  7 -    119109 TT-------GACT--A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_1816750                             2132  7 +      3202 AT-------GGAC--A
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1136966                               141  7 +      9785 AT-------GGAC--A
i Hylobates_agilis.k141_1136966                         N 0 C 0
s Hylobates_klossii.k141_468230                              3621  7 +      5464 GT-------GGAC--A
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14628967  7 -  25970782 GT-------GGAC--A
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            1519  7 +      4161 AT-------GGAC--A
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             37829  7 -     60944 GT-------GGAC--A
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     9937  7 +     22540 CT-------GAAT--A
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7130768  6 +  13083262 -t-------gaat--a
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   1978  5 +      3484 ---------gaac--a
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              13257  6 +     17520 GT--------GAC--T
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 I 1
s Jaculus_jaculus.JH725517.1                              8578264  6 +  11848649 GT-------G-AT--A
i Jaculus_jaculus.JH725517.1                            C 0 I 1135
s Kogia_breviceps.KogBre_flattened_line_35920               27876  6 +     37189 GT--------GAA--C
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 I 1
s Lagothrix_lagothricha.k141_12968                          54415  7 -    147782 GT-------GAAC--A
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    5951  7 +     26176 GT--------GAA-CT
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258411809  7 - 285822530 gt-------gaac--c
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        29118  7 +     39228 GT-------GAAC--A
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            58482  7 +     63517 GT-------GAAC--A
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        36862  7 -     38897 GT-------GAGC--A
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      2908  7 -     13103 GT-------GAAC--A
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3091839  6 -   3498232 aa--------acc--c
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    21261  7 +     22452 GT-------GAGT--A
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            140191  6 +   3060487 gt--------gaa--t
i Lipotes_vexillifer.KE558548.1                         C 0 I 1
s Lophocebus_aterrimus.ctg55                             19252851  7 +  19376315 gt-------gaac--a
i Lophocebus_aterrimus.ctg55                            C 0 I 30
s Loris_lydekkerianus.k141_550999                           15657  7 +     84689 gt-------aaac--a
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3783395  7 +   6799190 gt-------aaac--a
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20599179  7 -  62548349 gt-------gaac--c
i Loxodonta_africana.GL010040.1                         I 2 C 0
s Lycaon_pictus.CM007556.1                               11095592  6 +  39895028 GA--------ATG--C
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             24602  7 +     74745 GT-------GAAC--A
i Macaca_arctoides.k141_2201161                         C 0 I 31
s Macaca_assamensis.Contig65                             12711063  7 +  12821369 GT-------GAAC--A
i Macaca_assamensis.Contig65                            C 0 I 31
s Macaca_cyclopis.k119_883699                                3636  7 -     26467 GT-------GAAC--A
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           51507  7 +     63263 GT-------GAAC--A
i Macaca_fascicularis.k141_155037                       C 0 I 30
s Macaca_fuscata.k119_938422                                 3617  7 -     26361 GT-------GAAC--A
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 6807  7 -      7381 GT-------GAAC--A
i Macaca_leonina.k141_467472                            C 0 I 31
s Macaca_maura.k141_251854                                  50036  7 -     79256 GT-------GAAC--A
i Macaca_maura.k141_251854                              C 0 I 50
s Macaca_mulatta.NC_041755.1                            196040134  7 + 196197964 GT-------GAAC--A
i Macaca_mulatta.NC_041755.1                            C 0 N 0
s Macaca_nemestrina.KQ004885.1                           11450304  7 +  11645122 GT-------GAAC--A
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   8990  7 -     46448 GT-------GAAC--A
i Macaca_nigra.k141_282495                              C 0 I 50
s Macaca_radiata.k141_3680256                                6653  7 -     13212 GT-------GAAC--A
i Macaca_radiata.k141_3680256                           C 0 I 31
s Macaca_siberu.k141_741907                                 20333  7 -     55006 GT-------GAAC--A
i Macaca_siberu.k141_741907                             C 0 I 31
s Macaca_silenus.Contig12                                43845448  7 +  43892939 GT-------GAAC--A
i Macaca_silenus.Contig12                               C 0 I 30
s Macaca_thibetana.k99_662710                               21617  7 -     24607 GT-------GAAC--A
i Macaca_thibetana.k99_662710                           C 0 I 30
s Macaca_tonkeana.k141_2870633                               8987  7 -     27140 GT-------GAAC--A
i Macaca_tonkeana.k141_2870633                          C 0 I 50
s Mandrillus_leucophaeus.scaffold125                     43442023  7 -  43563597 gt-------gaac--a
i Mandrillus_leucophaeus.scaffold125                    C 0 I 31
s Mandrillus_sphinx.Contig144                             4454827  7 -   4543643 gt-------gaac--a
i Mandrillus_sphinx.Contig144                           C 0 I 31
s Marmota_marmota.CZRN01000005.1                         36878637  6 +  64221397 -t-------gaat--a
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       65998  7 -    234502 tt--------gag-cc
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             6969  6 -     87323 GA--------ACC--C
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 1653  6 +    115071 GT-------A-CC--T
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 I 9
s Mesocricetus_auratus.KB708139.1                         1051922  6 -  26018355 GT-------G-CC--A
i Mesocricetus_auratus.KB708139.1                       C 0 I 14
s Mesoplodon_bidens.MesBid_scaffold_96348                    2848  6 -     12939 GT--------GAG--C
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 I 1
s Microcebus_murinus.CM007691.1                          16514837  7 +  47401472 GT-------GAAC--A
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  41864  7 -     48017 tt-------ga--gcc
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               25351  7 -     32043 GT--------AAG-CC
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22824997  6 -  98408828 AT-------G-CC--A
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8213404  7 +  10048721 gt--------gaa-cc
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            37895  7 +     45743 gt--------gaa-cc
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         6569  7 +     29742 gt-------gaac--a
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        17335  6 -    104932 aa--------acc--c
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     5521  7 -     12809 gt-------gaac--a
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 150622  6 +    154973 gt--------gaa--t
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 I 1
s Mormoops_blainvillei.MorMeg_scaffold_2952                163882  7 +    265003 gt--------gaa-gt
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  6648  6 -     19904 GT--------GAA--C
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 I 1
s Mungos_mungo.MunMun_flattened_line_8729                  150711  6 -    168139 ga--------act--c
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          24812  7 -    100666 GT--------GAA-CC
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70772228  6 +  92629107 AT-------G-TC--T
i Mus_caroli.LT608236.1                                 I 32 I 32
s Mus_musculus.chr16                                     75494282  6 +  98207768 AT-------G-TC--T
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67561034  6 +  89017189 AT-------G-TC--T
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74337008  6 +  97876770 AT-------G-TC--T
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             15269  7 +     98495 gg-------gaat--a
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4429075  6 -  28371801 ga--------acc--c
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     94237  7 -    117718 TT-------GAAT--A
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               971691  7 +   8389877 gt--------gaa-cc
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5023111  7 +   6462685 gt--------gaa-cc
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3469195  7 -   3747815 gt--------gaa-cc
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        14436  7 +     66751 gt--------gaa-cc
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             8051 14 -      8794 ATGTACAGGGAAA--T
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            241013  6 -    362372 GT-------T-CT--A
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_1382660                              4226  7 +      5784 gc-------gaaa--a
i Nasalis_larvatus.k141_1382660                         C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4490733  6 -  14209539 aa--------acc--c
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3955213  6 -   4490290 gt--------gaa--t
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 I 1
s Noctilio_leporinus.NocLep_scaffold_12062                  50950  7 +     94413 gt--------gaa-cc
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_762468                             638  7 -      2755 gt-------ggac--a
i Nomascus_annamensis.k141_762468                       I 32 I 30
s Nomascus_concolor.k141_523891                              1288  7 +      1566 GT-------GAAT--A
i Nomascus_concolor.k141_523891                         C 0 C 0
s Nomascus_gabriellae.k141_1400361                           1189  7 -      2203 gt-------ggac--a
i Nomascus_gabriellae.k141_1400361                      I 32 I 30
s Nomascus_siki_b.tarseq_44                          10087564  7 -  26722205 GT-------GAAT--A
i Nomascus_siki_b.tarseq_44                         C 0 C 0
s Nomascus_siki_a.k141_421408                                  1103  7 +     16235 gt-------ggac--a
i Nomascus_siki_a.k141_421408                             I 32 I 30
s Nyctereutes_procyonoides.CAJHUB010000786.1                38457  6 +   3668941 GA--------ATG--C
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65572320  7 -  95554990 gc-------aaac--a
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_771591                            15730  7 +     16181 GC-------AAAC--A
i Nycticebus_coucang.k141_771591                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65680508  7 +  89412551 gc-------aaac--a
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            5000305  7 -  23139505 GA-------AAAT--G
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3689725  7 +  10294119 TT-------GAAT--A
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             685437  6 -   3126709 aa--------acc--c
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1084078  6 +   1425656 GA--------GAA--C
i Odocoileus_virginianus.KZ101650.1                     C 0 I 1
s Okapia_johnstoni.LVCL01S0017931.1                         42148  6 +     78940 AT--------GAA--C
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 I 1
s Ondatra_zibethicus.OndZib_scaffold_6821                  130793  6 +    145789 GT-------G-CC--A
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  43493  6 +     62360 GT-------G-CC--A
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7228887  6 -   7562323 gt--------gaa--t
i Orcinus_orca.KB316965.1                               C 0 I 1
s Orycteropus_afer.OryAfe_flattened_line_13509              64591  5 -     66828 gt-------aa----c
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141884278  7 + 163896628 GT-------GAGT--A
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      315595  6 -    505867 GA--------ATG--C
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        5556  7 -     53940 gt-------gaac--a
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18013525  7 -  38779656 GT-------GAAC--A
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134083085  6 - 275406953 gt--------gaa--c
i Ovis_aries.CM001582.2                                 C 0 I 1
s Ovis_canadensis.OviCan_scaffold_6251                      84319  6 +    140051 GT--------GAA--C
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 I 1
s Pan_paniscus.CM003386.1                                53339837  7 + 205426864 GT-------GAAT--A
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                             52442758  7 + 196562556 GT-------GAAT--A
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  40331  6 +    295523 ga--------act--c
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3644146  6 +  18214204 ga--------act--c
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5033794  6 -   6340057 ga--------act--c
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1071956  6 -   1292953 GT--------GAA--C
i Pantholops_hodgsonii.KE114631.1                       C 0 I 1
s Papio_anubis.CM001492.2                               188160812  7 - 188283584 GT-------GAAC--A
i Papio_anubis.CM001492.2                               C 0 N 0
s Papio_cynocephalus.k141_45376                              3902  7 +     25005 gt-------gaac--a
i Papio_cynocephalus.k141_45376                         C 0 I 31
s Papio_hamadryas.Contig15                               47518184  7 +  47705337 gt-------gaac--a
i Papio_hamadryas.Contig15                              C 0 I 31
s Papio_kindae.k141_5458022                                 72175  7 -    104429 gt-------gaac--a
i Papio_kindae.k141_5458022                             C 0 I 31
s Papio_papio.k141_979496                                   10707  7 +     14967 gt-------gaac--a
i Papio_papio.k141_979496                               C 0 I 30
s Papio_ursinus.k141_1345919                                 6572  7 -      7628 gt-------gaac--a
i Papio_ursinus.k141_1345919                            C 0 I 30
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    121813  6 -    135482 GA--------ACT--C
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          11220  7 -     23713 gt-------gaac--a
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           12371  7 +     61070 gt-------gaac--a
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       2667  7 +     49596 GG-------GAAT--A
i Perognathus_longimembris.PerPac_flattened_line_19359  I 3 C 0
s Peromyscus_maniculatus.KI615518.1                       4955857  6 -   8017169 GT-------G-CC--A
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              3354  6 +      8220 GT--------GAA--T
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 I 1
s Piliocolobus_badius.k141_512007                           29750  7 +     37672 gc-------gaaa--a
i Piliocolobus_badius.k141_512007                       C 0 C 0
s Piliocolobus_gordonorum.k141_736355                       29667  7 +     67079 gc-------gaaa--a
i Piliocolobus_gordonorum.k141_736355                   C 0 C 0
s Piliocolobus_kirkii.k141_451083                            4831  7 -     13367 GC-------GAAA--A
i Piliocolobus_kirkii.k141_451083                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000342.1                3428432  7 -   4356645 GC-------GAAA--A
i Piliocolobus_tephrosceles.PDMG02000342.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            99972  7 +    112873 GT--------GAA-CC
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           9832  6 +     21690 GT--------GAA--C
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 I 1
s Plecturocebus_bernhardi.k141_959214                       26506  7 +     44506 GT-------GAAC--A
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        26719  7 +     67491 GT-------GAAC--A
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      16958  7 -     98129 GT-------GAAC--A
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     26559  7 +    147771 GT-------GAAC--A
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         3194  7 -     43940 GT-------GAAC--A
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          7277  7 -     55515 GT-------GAAC--A
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         26631  7 +    152463 GT-------GAAC--A
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       4439  7 -    119457 GT-------GAAC--A
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         16353  7 +    134592 GT-------GAAC--A
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          26941  7 -     75465 GT-------GAAC--A
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.CM009265.2                               104014525  7 - 193656255 GT-------GAAT--A
i Pongo_abelii.CM009265.2                               C 0 C 0
s Pongo_pygmaeus.ctg127                                   6237487  7 -   6432864 GT-------GAAT--A
i Pongo_pygmaeus.ctg127                                 C 0 C 0
s Presbytis_comata.k141_678168                              10957  7 +     11126 GC-------GAAA--A
i Presbytis_comata.k141_678168                          C 0 C 0
s Presbytis_mitrata.k141_1767317                            10946  7 +     15869 GC-------GAAA--A
i Presbytis_mitrata.k141_1767317                        C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                4364  7 -      9567 AT-------GAGC--C
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6853183  7 +  12164890 GT-------GAAC--C
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     21990  7 -     30946 NN-------NNNN--N
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         8267  7 +     11805 GT-------GAAC--A
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           47601  7 +     52369 GT-------GACC--A
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         39988  7 -     44753 gt-------gaac--a
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            21911  7 +     27322 GT-------GAAC--A
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       21560  7 -     53241 GT-------GAAC--A
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         43823  7 -     48185 GT-------GAAC--A
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           38648  6 +     77221 GT-------G-CC--T
i Psammomys_obesus.NESX01026517.1                       C 0 I 9
s Pteronotus_parnellii.KE867983.1                            6532  7 -     27784 gc--------aaa-cc
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        250722  6 -    344369 GA--------ACC--C
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Puma_concolor.QAVW01000427.1                          131540443  6 - 161321710 ga--------act--c
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_951151                              2983  7 -      8225 gc-------gaaa--a
i Pygathrix_cinerea.k141_951151                         C 0 C 0
s Pygathrix_nigripes_b.ctg25                                14340819  7 -  15297009 gc-------gaaa--a
i Pygathrix_nigripes_b.ctg25                               C 0 C 0
s Pygathrix_nigripes_a.k141_758202                             3000  7 -      8240 gc-------gaaa--a
i Pygathrix_nigripes_a.k141_758202                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                20943  6 +     68503 GA--------GAA--C
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 I 1
s Rattus_norvegicus.chr11                                13918067  6 +  90463843 TT-------A-TC--T
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1793027  7 +   2252614 gt--------gag-cc
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   152255282  7 - 206558726 GC-------GAAA--A
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg241                            462090  7 +   1472273 gc-------gaaa--a
i Rhinopithecus_strykeri.ctg241                         C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                      1354  6 -      4338 GT--------GAA--C
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 I 1
s Saimiri_boliviensis.NW_024100938.1                     15676963  7 -  43202129 GT-------GAAC--A
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        8876  7 +     34089 GT-------GAAC--A
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              8816  7 -     60842 GT-------GAAC--A
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              8910  7 +     67014 GT-------GAAC--A
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              8887  7 +     60816 GT-------GAAC--A
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 8824  7 -     76454 GT-------GAAC--A
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17345609  7 -  30362882 at-------gaat--a
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         24930  7 -     62485 at-------gaat--a
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   40023  6 -    114521 GC-------A-AA--C
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1743075                       45528  7 +     45790 GC-------GAAA--A
i Semnopithecus_entellus.k141_1743075                   C 0 C 0
s Semnopithecus_hypoleucos.k141_2141024                      1301  7 -      8815 GC-------GAAA--A
i Semnopithecus_hypoleucos.k141_2141024                 C 0 C 0
s Semnopithecus_johnii.k141_1300894                          1318  7 +     13764 GC-------GAAA--A
i Semnopithecus_johnii.k141_1300894                     C 0 C 0
s Semnopithecus_priam.k141_368201                           10057  7 -     20692 GC-------GAAA--A
i Semnopithecus_priam.k141_368201                       C 0 C 0
s Semnopithecus_schistaceus.k141_628310                     45602  7 -     53123 GC-------GAAA--A
i Semnopithecus_schistaceus.k141_628310                 C 0 C 0
s Semnopithecus_vetulus.k141_748269                          4656  7 +     17284 GC-------GAAA--A
i Semnopithecus_vetulus.k141_748269                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  105855  6 -    120886 GT-------G-CC--A
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            23978  7 +    739146 GT-------GAAA--A
i Solenodon_paradoxus.SolPar_flattened_line_1012        I 2 C 0
s Sorex_araneus.JH798170.1                               17774209  3 -  27805282 TT-------A------
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2244470  6 +   2842873 -T-------GAAT--A
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             239512  6 -    276980 ga--------acc--c
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            33626  6 +     62062 aa--------act--c
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189275414  6 + 218635234 GT--------GAA--C
i Sus_scrofa.CM000824.4                                 C 0 I 1
s Symphalangus_syndactylus.tarseq_190                     4045957  7 -  10168602 gt-------gaat--a
i Symphalangus_syndactylus.tarseq_190                   C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                2760  7 +     20549 gt--------gaa-cc
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               17724 14 +     45698 ATGTACAGGGAAA--T
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      811229  7 +   1148477 gt--------gag-cc
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  61871  7 +     99546 GT--------GGA-CC
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194012345  7 - 194193292 GT-------GAAC--A
i Theropithecus_gelada.CM009951.1                       C 0 N 0
s Tolypeutes_matacus.TolMat_scaffold_475685                   815  5 -      3104 gt-------gaa----
i Tolypeutes_matacus.TolMat_scaffold_475685             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  138528  7 -    259118 gt--------gaa-cc
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_672638                         4901  7 +     38635 GC-------AAAA--A
i Trachypithecus_auratus.k141_672638                    C 0 C 0
s Trachypithecus_crepusculus.k141_863597                     4894  7 -     23436 GC-------GAAA--A
i Trachypithecus_crepusculus.k141_863597                C 0 C 0
s Trachypithecus_cristatus.k141_968903                      32543  7 +     43409 GC-------AAAA--A
i Trachypithecus_cristatus.k141_968903                  C 0 C 0
s Trachypithecus_francoisi.k141_1012484                       827  7 +      8809 GC-------GAAA--A
i Trachypithecus_francoisi.k141_1012484                 C 0 C 0
s Trachypithecus_geei.k141_137495                           30056  7 -     42322 gt-------gaaa--a
i Trachypithecus_geei.k141_137495                       C 0 C 0
s Trachypithecus_germaini.k141_240878                        5021  7 -     24955 GC-------AAAA--A
i Trachypithecus_germaini.k141_240878                   C 0 C 0
s Trachypithecus_hatinhensis.k141_641377                     1192  7 +      1365 GC-------GAAA--A
i Trachypithecus_hatinhensis.k141_641377                C 0 C 0
s Trachypithecus_laotum.k141_897381                         45596  7 -     53586 GC-------GAAA--A
i Trachypithecus_laotum.k141_897381                     C 0 C 0
s Trachypithecus_leucocephalus.k141_352489                   1167  7 +      9423 GC-------GAAA--A
i Trachypithecus_leucocephalus.k141_352489              C 0 C 0
s Trachypithecus_melamera.k141_950981                        2182  7 -      3512 GC-------GAAA--A
i Trachypithecus_melamera.k141_950981                   C 0 C 0
s Trachypithecus_obscurus.k141_588024                        4906  7 +      4963 GC-------GAAA--A
i Trachypithecus_obscurus.k141_588024                   C 0 C 0
s Trachypithecus_phayrei.ctg364                            232405  7 -   1198723 gc-------gaaa--a
i Trachypithecus_phayrei.ctg364                         C 0 C 0
s Trachypithecus_pileatus.k141_532233                       30076  7 -     40754 gt-------gaaa--a
i Trachypithecus_pileatus.k141_532233                   C 0 C 0
s Trichechus_manatus.JH594618.1                          16090256  7 +  31416278 gt-------gaaa--t
i Trichechus_manatus.JH594618.1                         C 0 I 5
s Tupaia_chinensis.KB320831.1                             2801533  7 -   3938065 GT-------GAGT--A
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                   10150  7 +     13056 GT-------AAGT--A
i Tupaia_tana.TupTan_flattened_line_68454               C 0 I 204
s Tursiops_truncatus.MRVK01000923.1                      69317617  6 -  96451834 gt--------gaa--t
i Tursiops_truncatus.MRVK01000923.1                     C 0 I 1
s Uropsilus_gracilis.UroGra_scaffold_4115                     479  6 +    136657 GT-------G-AA--T
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 C 0
s Ursus_maritimus.KK498671.1                              6521145  6 +  28682327 ga--------acc--c
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  9825  7 -     20643 at-------gaac--a
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             29360  7 -     33872 at-------gaac--a
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1528657  6 -   2331223 gT--------AAA--C
i Vicugna_pacos.KN269600.1                              C 0 I 1
s Vulpes_lagopus.VulLag_flattened_line_2045                144822  6 -    281493 GA--------ATG--C
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       131959  6 -    134049 -T-------GAAT--A
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        220294  6 -    227762 aa--------acc--c
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_256618                     1723  6 -      2259 GT-------G-GT--A
i Zapus_hudsonius.ZapHud_scaffold_256618                C 0 N 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            2356  6 -     13665 TT--------GAA--C
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 I 1
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Petromus_typicus.PetTyp_scaffold_33007                    17492  0 -     36578 C
e Tragulus_javanicus.TraJav_scaffold_14717                   9488 743 +     90398 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Manis_pentadactyla.KN017078.1                             40171  0 +     58827 C
e Manis_javanica.JSZB01003966.1                            152577  0 +    252755 C
e Elephantulus_edwardii.JH947210.1                        7834558  0 +  15467074 C
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Tarsius_wallacei.k141_48636                               64696  0 +     65473 C
e Tarsius_lariang.k141_609102                               31387  0 +     42269 C
e Rhinopithecus_bieti.k119_554384                            2917  0 -     17045 C
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Cephalopachus_bancanus.k141_702587                        12545  0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530  0 +    345090 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               17954 30 +    209709 T-TA-C--A--aa-A----CCTCTG-G-TCCC-AC--C--TTA-TT-AA--G
s Acinonyx_jubatus.LLWD01000356.1                         2039923  9 +   3721120 t-tt-c--a--ga-g----c--------------------------------
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    118265 34 -    189883 G-GC-CAAA--TA-G----CCTCAT-G-GTCT-TG--TTTTGA-AA-AT--A
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Allactaga_bullata.AllBul_scaffold_141108                   1657 13 -      7259 ---------------------------------AA--A--ACT-AA-AAATA
i Allactaga_bullata.AllBul_scaffold_141108              I 399 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10663883  9 +  23371972 t-tt-c--a--ga-g----c--------------------------------
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7100409  9 -  16596857 T-TT-C--A--GA-G----C--------------------------------
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allenopithecus_nigroviridis.k141_2285818                  36806 30 -     52229 T-TT-C--A--AA-G----CTGCTG-G-TCCC-AT--C--TTT-TT-AA--A
i Allenopithecus_nigroviridis.k141_2285818              I 55 n 30
s Allochrocebus_lhoesti.k141_2676980                        46495 30 +     59001 T-TT-C--A--AA-G----CTGCTG-G-TCCC-AT--C--TTT-TT-AA--A
i Allochrocebus_lhoesti.k141_2676980                    I 55 C 0
s Allochrocebus_preussi.k141_1848067                         5749 30 +      6015 T-TT-C--A--AA-G----CTGCTG-G-TCCC-AT--C--TTT-TT-AA--A
i Allochrocebus_preussi.k141_1848067                    I 59 I 4
s Allochrocebus_solatus.k141_3029467                         1127 30 +      1260 T-TT-C--A--AA-G----CTGCTG-G-TCCC-AT--C--TTT-TT-AA--A
i Allochrocebus_solatus.k141_3029467                    I 55 C 0
s Alouatta_belzebul.k141_276091                              1423 30 +     19852 t-tg-c--a--aa-g----ccgctg-g-cccc-ac--c--ttc-tt-aa--g
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                3667 30 -     12443 t-tg-c--a--aa-g----ccgctg-g-cccc-ac--c--ttc-tt-aa--g
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                              966 30 +      5070 t-tg-c--a--aa-g----ccgctg-g-cccc-ac--c--ttc-tt-aa--g
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                  711 30 -      1641 t-tg-c--a--aa-g----ccgctg-g-cccc-ac--c--ttc-tt-aa--g
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          3450 30 -     24210 t-tg-c--a--aa-g----ccgctg-g-cccc-ac--c--ttc-tt-aa--g
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           30032 30 -     30219 t-tg-c--a--aa-g----ccgctg-g-cccc-ac--c--ttc-tt-aa--g
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_405616                              5868 30 +     16794 t-tg-c--a--aa-g----ccgctg-g-cccc-ac--c--ttc-tt-aa--g
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                            1000 30 -      1470 t-tg-c--a--aa-g----ccgctg-g-cccc-ac--c--ttc-tt-aa--g
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             5145 30 -      9835 t-tg-c--a--aa-g----ccgctg-g-cccc-ac--c--ttc-tt-aa--g
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3525957  9 +   4113121 T-TT-C--A--AA-G----T--------------------------------
i Ammotragus_lervia.NIVO01013474.1                      I 1 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      392976  9 -    631301 T-TT-C--A--AA-G----C--------------------------------
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             3390  9 +     55446 T-TT-C--A--AA-G----C--------------------------------
i Antilocapra_americana.AntAmePen_scaffold_27338        I 1 C 0
s Aotus_azarae.k141_3170768                                 66754 31 +     78111 t-tg-c--a--aa-g----ccgctg-g-cccccac--c--ttc-tt-aa--g
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            9702 31 +     22701 T-TG-C--A--AA-G----CCTCTG-GCCCCC-AC--C--TTC-TT-AA--G
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5753659 30 +   9889416 T-TG-C--A--AG-G----CCGCTG-G-CCCC-AC--C--TTc-tt-aa--g
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                            10258 30 -    104377 t-tg-c--a--ag-g----ccgctg-g-cccc-ac--c--ttc-tt-aa--g
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                              10265 30 +     23246 t-tg-c--a--ag-g----ccgctg-g-cccc-ac--c--ttc-tt-aa--g
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     2794 30 +     11424 T-TC-C--A--AA-G----TCCCCT-T-TTCC-AC--A--TTT-AA-AA--A
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        6854 30 +      9265 t-ct-c--a--aa-g----tctcta-g-ttcc-ac--c--ttt-tc-ca--a
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                11385  9 -     29036 T-TT-C--A--AA-T----C--------------------------------
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9543553 30 +  39197703 t-tg-c--a--aa-g----ccgctg-g-cccc-ac--c--ttc-tt-aa--g
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             64827 30 +     85812 t-tg-c--a--aa-g----ccgctg-g-cccc-ac--c--ttc-tt-aa--g
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                15840 30 +     89302 t-tg-c--a--aa-g----ccgctg-g-cccc-ac--c--ttc-tt-aa--g
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             20341 30 -     58268 t-tg-c--a--aa-g----ccgctg-g-cccc-ac--c--ttc-tt-aa--g
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             68335 30 +    119057 t-tg-c--a--aa-g----ccgctg-g-cccc-ac--c--ttc-tt-aa--g
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              10304 30 -     25888 t-tg-c--a--aa-g----ccgctg-g-cccc-ac--c--ttc-tt-aa--g
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                11366 30 -     16375 t-tt-c--a--aa-g----cctctg-c-cccc-ac--c--ttt-tt-ca--a
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               4982 30 +      6337 t-tt-c--a--aa-g----cctctg-c-cccc-ac--c--ttt-tt-ca--a
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26384433  9 +  51448160 t-tt-c--a--ga-g----a--------------------------------
i Balaenoptera_acutorostrata.KI537095.1                 I 1 C 0
s Balaenoptera_bonaerensis.DF502048.1                        9606  9 -     13118 t-tt-c--a--ga-g----c--------------------------------
i Balaenoptera_bonaerensis.DF502048.1                   I 1 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   48421  9 -     72089 T-TT-C--A--AA-G----C--------------------------------
i Beatragus_hunteri.BeaHun_scaffold_21644               I 1 C 0
s Bison_bison.KN264915.1                                   302560  9 -   6870073 T-TT-C--A--AA-G----C--------------------------------
i Bison_bison.KN264915.1                                I 1 C 0
s Bos_indicus.CM003021.1                                 22956658  9 + 161108492 T-TT-C--A--AA-G----C--------------------------------
i Bos_indicus.CM003021.1                                I 1 C 0
s Bos_mutus.JH883513.1                                     418899  9 +    998990 T-TT-C--A--AA-G----C--------------------------------
i Bos_mutus.JH883513.1                                  I 1 C 0
s Bos_taurus.CM000177.6                                  22665312  9 + 158972876 T-TT-C--A--AA-G----C--------------------------------
i Bos_taurus.CM000177.6                                 I 1 C 0
s Bubalus_bubalis.KI419065.1                               675249  9 +   1914593 T-TT-C--A--AA-G----C--------------------------------
i Bubalus_bubalis.KI419065.1                            I 1 C 0
s Cacajao_ayresi.k141_724503                               118203 30 -    171031 t-tg-g--a--aa-g----ccgctg-g-tccc-ac--t--ttc-tt-aa--g
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 17223 30 +    125063 t-tg-g--a--aa-g----ccgctg-g-tccc-ac--t--ttc-tt-aa--g
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                19270 30 -    216513 t-tg-g--a--aa-g----ccgctg-g-tccc-ac--t--ttc-tt-aa--g
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       11813 30 -    134917 t-tg-g--a--aa-g----ccgctg-g-tccc-ac--t--ttc-tt-aa--g
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3223556  9 -   8989139 T-TT-C--A--AA-G----C--------------------------------
i Camelus_bactrianus.KN276303.1                         I 1 C 0
s Camelus_dromedarius.KN271192.1                           401257  9 -  15254737 T-TT-C--A--AA-G----C--------------------------------
i Camelus_dromedarius.KN271192.1                        I 1 C 0
s Camelus_ferus.KB016973.1                                2976994  9 +   6889770 T-TT-C--A--AA-G----C--------------------------------
i Camelus_ferus.KB016973.1                              I 1 C 0
s CanFam4.chr31                                          11526748  9 +  39901454 T-TT-C--A--GA-G----C--------------------------------
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   21722  9 +     87036 T-TT-C--A--GA-G----C--------------------------------
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11273431  9 -  35597290 T-TT-C--A--GA-G----C--------------------------------
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11096142  9 +  39895921 T-TT-C--A--GA-G----C--------------------------------
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16462927  9 -  44759192 T-TT-C--A--GA-G----C--------------------------------
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21333901  9 + 157394656 T-TT-C--A--AA-G----C--------------------------------
i Capra_aegagrus.CM003214.1                             I 1 C 0
s Capra_hircus.CM004562.1                               135712256  9 - 157403528 T-TT-C--A--AA-G----C--------------------------------
i Capra_hircus.CM004562.1                               I 1 C 0
s Capromys_pilorides.CapPil_scaffold_529800                   622 26 -      2320 T-GA-C--A--AA-T----TTTCTT-G-TCCC-AG--A--GTT-A-------
i Capromys_pilorides.CapPil_scaffold_529800             C 0 I 2
s Carollia_perspicillata.CarPer_scaffold_4436               62399  9 +     67245 t-tt-c--a--aa-g----c--------------------------------
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_1326                      385 31 -    202837 T-TC-C--A--AA-G----CCTCTC-T-GCCA-AC--A--TTTTCC-AA--A
i Castor_canadensis.CasCan_scaffold_1326                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   163067  9 -    276539 T-TT-C--A--AA-A----C--------------------------------
i Catagonus_wagneri.CatWag_scaffold_1305                I 1 C 0
s Cavia_aperea.AVPZ01000278.1                            15790081 26 -  24422027 T-GC-C--A--AA-T----TCTCTT-G-TCCC-AC--A--GTT-A-------
i Cavia_aperea.AVPZ01000278.1                           C 0 I 2
s Cavia_porcellus.DS562889.1                             15802020 26 -  24440124 T-GC-C--A--AA-T----TCTCTT-G-TCCC-AC--A--GTT-A-------
i Cavia_porcellus.DS562889.1                            C 0 I 2
s Cavia_tschudii.CavTsc_scaffold_488                       180192 26 +    436027 T-GC-C--A--AA-T----TCTCTT-G-TCCC-AC--A--GTT-A-------
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 I 2
s Cebus_albifrons.Contig22                               18895928 30 -  29618158 t-tg-c--a--aa-g----ccgctg-g-cccc-ac--c--ttc-tt-aa--g
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                12578 30 -     26817 t-tg-c--a--aa-g----ccgctg-g-cccc-ac--c--ttc-tt-aa--g
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                16822 30 +     25043 t-tg-c--a--aa-g----ccgctg-g-cccc-ac--c--ttc-tt-aa--g
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4368002  9 +   7569818 t-tt-c--a--aa-g----c--------------------------------
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         7759  9 -      9338 T-TT-C--A--AA-G----C--------------------------------
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ012885.1                               184038 30 +  41321030 T-TT-C--A--AA-G----CTGCTG-G-tccc-at--c--ttt-tt-aa--a
i Cercocebus_atys.KQ012885.1                            I 69 n 30
s Cercocebus_chrysogaster.k141_1635769                       2039 30 +     20388 T-TT-C--A--AA-G----CTGCTG-G-TCCC-AT--C--TTT-TT-AA--A
i Cercocebus_chrysogaster.k141_1635769                  I 55 C 0
s Cercocebus_lunulatus.k141_4337841                          5735 30 -     20249 T-TT-C--A--AA-G----CTGCTG-G-TCCC-AT--C--TTT-TT-AA--A
i Cercocebus_lunulatus.k141_4337841                     I 69 n 30
s Cercocebus_torquatus.k141_1908611                          2507 30 +      7529 T-TT-C--A--AA-G----CTGCTG-G-TCCC-AT--C--TTT-TT-AA--A
i Cercocebus_torquatus.k141_1908611                     I 69 n 30
s Cercopithecus_ascanius.k141_1579766                        2918 30 -      4795 T-TT-C--A--CA-G----CTGCTG-G-TCCC-AT--C--TTT-TT-AA--A
i Cercopithecus_ascanius.k141_1579766                   I 55 C 0
s Cercopithecus_cephus.k141_787308                          10801 30 -     21850 T-TT-C--A--CA-G----CTGCTG-G-TCCC-AT--C--TTT-TT-AA--A
i Cercopithecus_cephus.k141_787308                      I 59 n 30
s Cercopithecus_diana.k141_650374                            2090 30 -      8439 T-TT-C--A--AA-G----CTGCTG-G-TCCC-AT--C--TTT-TT-AA--A
i Cercopithecus_diana.k141_650374                       I 59 n 30
s Cercopithecus_hamlyni.k141_955432                          2864 30 -      7769 T-TT-C--A--AA-G----CTGCTG-G-TCCC-AT--C--TAT-TT-AA--A
i Cercopithecus_hamlyni.k141_955432                     I 55 C 0
s Cercopithecus_lowei.k141_1996                              5261 30 -     17229 T-TT-C--A--AA-G----CTGCTG-G-TCCC-AT--C--TTT-TT-AA--A
i Cercopithecus_lowei.k141_1996                         I 55 C 0
s Cercopithecus_albogularis.ctg86                                350295 30 +  11364408 T-TT-C--A--AA-G----CTGCTG-G-TCCC-AT--C--TTT-TT-AA--A
i Cercopithecus_albogularis.ctg86                             I 55 C 0
s Cercopithecus_mona.ctg21                               13251082 30 -  35162767 T-TT-C--A--AA-G----CTGCTG-G-TCCC-AT--C--TTT-TT-AA--A
i Cercopithecus_mona.ctg21                              I 59 n 30
s Cercopithecus_neglectus.k141_1258634                        726 30 -      1218 T-TT-C--A--AA-G----CTGCTG-G-TCCC-AT--C--TTT-TT-AA--A
i Cercopithecus_neglectus.k141_1258634                  I 59 I 4
s Cercopithecus_nictitans.k141_298052                       10799 30 +     24998 T-TT-C--A--AA-G----CTGCTG-G-TCCC-AT--C--TTT-TT-AA--A
i Cercopithecus_nictitans.k141_298052                   I 59 n 30
s Cercopithecus_petaurista.k141_2400098                      8623 30 -      8977 T-TT-C--A--AA-G----CTGCTG-G-TCCC-AT--C--TTT-TT-AA--A
i Cercopithecus_petaurista.k141_2400098                 I 59 n 30
s Cercopithecus_pogonias.k141_1631406                         669 30 +     11509 T-TT-C--A--AA-G----CTGCTG-G-TCCC-AT--C--TTT-TT-AA--A
i Cercopithecus_pogonias.k141_1631406                   I 55 C 0
s Cercopithecus_roloway.k141_550462                         15299 30 +     34041 T-TT-C--A--AA-G----CTGCTG-G-TCCC-AT--C--TTT-TT-AA--A
i Cercopithecus_roloway.k141_550462                     I 55 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           4980 26 -      6963 --------a--aa-g----tcttag-g-tcac-ac--a--ttt-tt-aa--a
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           63575 30 -     68416 t-tt-c--a--aa-g----cctcct-g-cccc-ac--c--ttt-at-cg--a
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                           12695 30 +     13308 t-tt-c--a--aa-g----cctctt-g-ctcc-ac--c--ttt-at-cg--a
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             9864 30 -     18223 T-TG-C--A--AA-G----TCACTG-G-CCCA-AC--C--TTC-TT-AA--G
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              1602 30 +    188999 T-TG-C--A--AA-G----TCACTG-G-CCCA-AC--C--TTC-TT-AA--G
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           45901 30 +     57117 T-TG-C--A--AA-G----TCACTG-G-CCCA-AC--C--TTC-TT-AA--G
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          50581 30 +     54541 T-TG-C--A--AA-G----TTACTG-G-CCCA-AC--C--TTC-TT-AA--G
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15964774 26 +  43084221 T-GC-C--A--AA-T----GTTCTC-G-TCcc-ac--a--gtt-a-------
i Chinchilla_lanigera.JH721867.1                        C 0 I 2
s Chiropotes_israelita.k141_1189915                         75382 30 +    196370 t-tg-g--a--aa-g----ccgctg-g-tccc-ac--t--ttc-tt-aa--g
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          19563 30 +     40510 t-tg-g--a--aa-g----ccgctg-g-tccc-ac--t--ttc-tt-aa--g
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg55                              5018350 30 -  11124196 T-TT-C--A--AA-G----CTGCTG-G-TCCC-AT--C--TTT-TT-AA--A
i Chlorocebus_aethiops.ctg55                            I 59 I 4
s Chlorocebus_pygerythrus.k141_596994                        4193 30 +     16635 T-TT-C--A--AA-G----CTGCTG-G-TCCC-AT--C--TTT-TT-AA--A
i Chlorocebus_pygerythrus.k141_596994                   I 55 C 0
s Chlorocebus_sabaeus.CM001963.2                         13528723 30 + 101219884 T-TT-C--A--AA-G----CTGCTG-G-tccc-at--c--ttt-tt-aa--a
i Chlorocebus_sabaeus.CM001963.2                        N 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                19091 31 -     21363 t-tt-c--a-aaa-g----tcttag-g-tcac-ag--a--ttt-tt-aa--a
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           764395 31 +    964067 t-tt-c--a-aaa-g----tcttag-g-tcac-ag--a--ttt-tt-aa--a
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_629495              2640 30 -      3120 T-TT-C--A--AA-C----TCTCTA-A-TCAC-AC--A--TTT-TA-AG--A
i Chrysochloris_asiatica.ChrAsi_scaffold_629495         C 0 N 0
s Colobus_angolensis.KN983490.1                            283898 30 +    886210 T-TT-C--A--AA-G----CTGCTG-G-Tccc-at--c--ttt-tt-aa--a
i Colobus_angolensis.KN983490.1                         C 0 C 0
s Colobus_guereza.LG08                                   96946787 30 - 156195979 t-tt-c--a--aa-g----ctgctg-g-tccc-at--c--ttt-tt-aa--a
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_688201                               450 30 +      1908 t-tt-c--a--aa-g----ctgctg-g-tccc-at--c--ttt-tt-aa--a
i Colobus_polykomos.k141_688201                         C 0 I 1
s Condylura_cristata.JH655880.1                          60622556  9 +  78930452 T-TC-A--C--AA-A----G--------------------------------
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         2920  9 -      5782 t-tt-c--a--aa-g----c--------------------------------
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 283043 32 -    399297 G-AT-C--A--TA-G----TCTCTC-A-GGCT-TT--TTTTTT-AA-AT--A
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53035410  8 +  72327488 --------------------------G-GTCT-TC--T--------------
i Cricetulus_griseus.LT883672.1                         I 6 I 8
s Crocidura_indochinensis.CroInd_scaffold_27484              2512  9 -     22648 T-TT-C--T--AA-A----T--------------------------------
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            57902  9 -     70449 t-tt-c--g--ga-g----c--------------------------------
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  214660 30 -    956709 T-GC-C--A--AA-T----CCTCTT-G-TTTC-AC--G--TCT-TT-AA--A
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 34742 26 -     67205 T-GC-C--A--AA-T----TCTCTT-G-CCCC-AC--A--GTT-A-------
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 I 2
s Cuniculus_paca.CunPac_flattened_line_16637                21264 26 +     26546 T-AA-A--A--AG-T----TCTCTT-G-TCCC-AC--A--GTT-A-------
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 I 2
s Dasyprocta_punctata.DasPun_flattened_line_634             62402 26 -    236241 T-GC-C--A--AA-T----TCTCTT-G-TCTT-AC--A--GTT-A-------
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 I 2
s Dasypus_novemcinctus.JH568778.1                          186040 26 -   6883506 --------a--aa-g----tcttaa-g-tcac-ac--a--ttt-tt-aa--a
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16849527 30 +  31942871 t-tt-c--a--aa-g----cctctg-g-tccc-ac--c--ttt-tt-ca--a
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80041036  9 -  96802777 t-tt-c--a--aa-g----c--------------------------------
i Delphinapterus_leucas.KZ290064.1                      I 1 C 0
s Desmodus_rotundus.KZ672188.1                           18701611  9 -  18957592 T-TT-C--A--AA-G----C--------------------------------
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 326658  9 +    993696 t-tt-c--A--AA-T----C--------------------------------
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   7290  9 +    151128 T-TT-C--A--AA-G----C--------------------------------
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   160028 26 +    228994 G-GT-C--A--AA-T----TTTCTT-G-TTCC-AC--A--CTT-T-------
i Dinomys_branickii.DinBra_scaffold_1996                C 0 I 2
s Dipodomys_ordii.KN672545.1                              3660695 31 +   4240102 T-TC-T--A--AA-G----CTTCTTAG-CCCA-TG--T--TTT-TG-AC--A
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  3049 31 -     11986 T-TC-T--A--AA-G----CTTCTTAG-CCCA-TG--T--TTT-TG-AC--A
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                40978 26 -     73477 T-GC-C--A--AA-T----TCTCTT-G-TCCC-AC--A--GTT-A-------
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 I 2
s Echinops_telfairi.JH980316.1                           23000303 30 -  44670279 t-ct-c--a--aa-g----tgtcta-a-tcac-ac--a--ttt-ta-aa--a
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1496637  9 +   1727528 T-TT-C--A--AA-G----C--------------------------------
i Elaphurus_davidianus.JRFZ01086400.1                   I 1 C 0
s Elephantulus_edwardii.JH947210.1                        7834558 29 +  15467074 --TT-C--A--AA-G----TTTCCC-A-TCAC-AC--t--ttt-ta-ag--a
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        244206 34 -    369425 G-GC-C--ATATA-G----CCTCTT-G-GTCt-tg--ttt-tagaa-at--a
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01076532.1                            564  7 +      9159 ------------------------------------------agaa-at--a
i Ellobius_talpinus.LOJH01076532.1                      N 0 C 0
s Enhydra_lutris.KZ291749.1                              85877872  9 +  99434291 t-tt-c--a--aa-g----c--------------------------------
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4709363  9 +   6522550 T-TT-C--A--AA-G----C--------------------------------
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5856750  9 -   7175178 t-tt-c--a--aa-g----c--------------------------------
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13355236  9 +  41866177 t-tt-c--a--aa-g----c--------------------------------
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          16726  9 +     92910 t-tt-c--a--aa-g----c--------------------------------
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11541678  9 +  16010500 T-TT-C--A--AA-A----T--------------------------------
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig45                            12732164 30 -  18870230 T-TT-C--A--AA-G----CTGCTG-G-TCCC-AT--C--TTT-TT-AA--A
i Erythrocebus_patas.Contig45                           I 59 n 30
s Eschrichtius_robustus.EscRob_flattened_line_685          319276  9 +    330699 T-TT-C--A--GA-G----C--------------------------------
i Eschrichtius_robustus.EscRob_flattened_line_685       I 1 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             65733  9 +     89355 T-TT-C--A--AA-G----C--------------------------------
i Eubalaena_japonica.EubJap_flattened_line_7756         I 1 C 0
s Eulemur_albifrons.k141_59549                                767 30 +      1101 T-TT-C--A--AA-G----CCTCTG-G-TCCC-AC--C--TTT-TT-CA--A
i Eulemur_albifrons.k141_59549                          I 9 I 116
s Eulemur_collaris.k141_1015201                              2934 30 -      4292 T-TT-C--A--AA-G----CCTCTG-G-CCCC-AC--C--TTT-TT-CA--A
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            16071 30 +     36558 T-TT-C--A--AA-G----CCTCTG-G-CCCC-AC--C--TTT-TT-CA--A
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            12393 30 +     60246 t-tt-c--a--aa-g----cctctg-g-cccc-ac--c--ttt-tt-ca--a
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                15878 30 +    109717 t-tt-c--a--aa-g----cctctg-g-cccc-ac--c--ttt-tt-ca--a
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 3861 30 -     19505 T-TT-C--A--AA-G----CCTCTG-G-CCCC-AC--C--TTT-TT-CA--A
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                20536 30 +     27497 T-TT-C--A--AA-G----CCTCTG-G-CCCC-AC--C--TTT-TT-CA--A
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           22992 30 +     26808 T-TT-C--A--AA-G----CCTCTG-G-CCCC-AC--C--TTT-TT-CA--A
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                37724 30 +     46535 T-TT-C--A--AA-G----CCTCTG-G-TCCC-AC--C--TTT-TT-CA--A
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              20465 30 -     29447 T-TT-C--A--AA-G----CCTCTG-G-CCCC-AC--C--TTT-TT-CA--A
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129899343  9 - 159252932 t-tt-c--a--ga-g----c--------------------------------
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129286318  9 - 158578461 t-tt-c--a--ga-g----c--------------------------------
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 27417  9 +     52776 t-tt-c--a--ga-g----c--------------------------------
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13896549 26 -  19261668 T-GT-C--A--AG-T----TTTCtt-g-tctc-ac--t--ttt-t-------
i Fukomys_damarensis.KN123630.1                         C 0 I 2
s Galago_moholi.ctg555                                     215701 30 -    847004 t-ct-c--a--aa-g----tgtctg-g-ttcc-ac--c--ttt-tc-ca--a
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           18062 30 -     43889 t-ct-c--a--aa-g----tgtctg-g-ttcc-ac--c--ttt-tc-ca--a
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          15206 30 +     27357 t-ct-c--a--aa-g----tctctg-g-ttcc-ac--c--ttt-tc-ca--a
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               159974 30 +    324696 t-tc-c--a--aa-g----cctctg-g-tccc-ac--a--ttt-ta-aa--a
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    186414  9 -    189561 T-TT-C--A--AA-G----C--------------------------------
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 1 C 0
s Glis_glis.GliGli_scaffold_79770                           16871 30 -     18683 T-TC-C--A--AA-G----GCCCTT-G-TCCC-AC--A--TTT-AA-AA--A
i Glis_glis.GliGli_scaffold_79770                       C 0 I 1
s Gorilla_beringei.k141_2641970                               642 30 +      9263 t-tt-c--a--aa-g----tcgctg-g-tccc-at--c--ttt-tt-aa--a
i Gorilla_beringei.k141_2641970                         C 0 C 0
s Gorilla_gorilla.LT578340.1                             52344735 30 + 195582420 t-tt-c--a--aa-g----tcgctg-g-tccc-at--c--ttt-tt-aa--a
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   80187 30 +    118900 t-tc-t--a--aa-g----cttctc-t-cccc-ac--a--ttt-aa-aa--a
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         6464 30 +     10286 t-tt-c--a--aa-g----cctctg-g-cccc-ac--c--ttt-tt-ca--a
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             4942 30 -     11661 t-tt-c--a--aa-g----cctctg-g-cccc-ac--c--ttt-tt-ca--a
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                            10269 30 +     56096 t-tt-c--a--aa-g----cctctg-g-cccc-ac--c--ttt-tt-ca--a
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        33518 30 -     42470 t-tt-c--a--aa-g----cctctg-g-cccc-ac--c--ttt-tt-ca--a
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        50141 30 -     54384 t-tt-c--a--aa-g----cctctg-g-cccc-ac--c--ttt-tt-ca--a
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              23040  9 +     53719 t-tt-c--a--ga-g----c--------------------------------
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                33306  9 -     91191 T-TT-C--A--AA-G----C--------------------------------
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 1 C 0
s Heterocephalus_glaber.JH602058.1                        2561041 26 +  31725842 T-AC-C--A--AA-T----TCTCTt-g-tctc-ac--a--ttt-t-------
i Heterocephalus_glaber.JH602058.1                      C 0 I 2
s Heterohyrax_brucei.HetBruBak_scaffold_25354               63265 30 +     73687 t-gt-c--a--aa-g----tctctg-a-tcac-at--g--ttt-tt-aa--a
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              151066  9 +    277961 T-TT-C--A--AA-G----C--------------------------------
i Hippopotamus_amphibius.HipAmp_scaffold_1308           I 1 C 0
s Hipposideros_armiger.JXIK01001085.1                      283455  9 -    477199 t-tt-c--a--aa-g----c--------------------------------
i Hipposideros_armiger.JXIK01001085.1                   I 7 C 0
s Hipposideros_galeritus.HipGal_scaffold_7653                6005  9 +     86108 t-tt-c--a--aa-g----c--------------------------------
i Hipposideros_galeritus.HipGal_scaffold_7653           I 44 C 0
s Hoolock_leuconedys.ctg83                                  28460087 30 -  32676794 T-TT-C--A--AA-G----CCTCTG-G-TCCC-AT--C--TTT-TT-AA--G
i Hoolock_leuconedys.ctg83                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 23513  9 -     67322 T-TT-C--A--GA-G----A--------------------------------
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           21639 26 -    119109 T-GC-C--A--AA-T----GCTCTT-G-TCTC-AC--A--GTT-A-------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 I 2
s Hylobates_abbotti.k141_1816750                             2139 30 +      3202 T-TA-C--A--AA-G----CCTCTG-G-TCCC-AC--A--TTC-TT-AA--G
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1136966                               148 30 +      9785 T-TA-C--A--AA-G----CCTCTG-G-TCCC-AC--A--TTC-TT-AA--G
i Hylobates_agilis.k141_1136966                         C 0 C 0
s Hylobates_klossii.k141_468230                              3628 30 +      5464 T-TA-C--A--AA-A----CCTCTG-A-TCCC-AC--C--TTC-TT-AA--G
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14628974 30 -  25970782 T-TA-C--A--AA-G----CCTCTG-G-TCCC-AC--C--TTC-TT-AA--G
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            1526 30 +      4161 T-TA-C--A--AA-G----CCTCTG-G-TCCC-AC--A--TTC-TT-AA--G
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             37836 30 -     60944 T-TA-C--A--AA-G----CCTCTG-G-TCCC-AC--C--TTC-TT-AA--T
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     9944 30 +     22540 T-GC-C--A--AA-T----TCTCTT-G-TCCC-AC--A--TTT-AA-AA--A
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7130774 21 +  13083262 t-tc-c--a--aa-g----cctctt-t-ttcc-at-----------------
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 I 8
s Indri_indri.k141_2197838                                   1983 30 +      3484 t-tt-c--a--aa-g----cctctg-c-ctct-ac--c--ttt-tt-ca--a
i Indri_indri.k141_2197838                              C 0 C 0
s Jaculus_jaculus.JH725517.1                              8579405  4 +  11848649 ---------------------------------------------a-aa--a
i Jaculus_jaculus.JH725517.1                            I 1135 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              13264  9 +     17520 T-TT-C--A--AA-G----C--------------------------------
i Inia_geoffrensis.IniGeo_flattened_line_66725          I 1 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               27883  9 +     37189 T-TT-C--A--AA-T----C--------------------------------
i Kogia_breviceps.KogBre_flattened_line_35920           I 1 C 0
s Lagothrix_lagothricha.k141_12968                          54422 30 -    147782 T-TG-C--A--AA-G----CCGCTG-G-CCCC-AC--C--TTC-TT-AA--G
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    5958  9 +     26176 T-TT-C--A--AA-G----C--------------------------------
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258411816 30 - 285822530 t-tt-c--a--aa-g----cctctg-g-tctc-ac--c--ttt-tt-ca--a
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        29125 30 +     39228 T-TT-C--A--AA-G----CCTCTT-G-CCCC-AC--C--TTT-TT-CA--A
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            58489 30 +     63517 T-TT-C--A--AA-G----CCTCTT-G-CCCC-AC--C--TTT-TT-CA--A
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        36869 30 -     38897 C-TT-C--A--AA-G----CCTCTT-G-CCCC-AC--C--TTT-TT-CA--A
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      2915 30 -     13103 T-TT-C--A--AA-C----CCTCTT-G-CCCC-AC--C--TTT-TT-CA--A
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3091845  9 -   3498232 t-tt-c--a--ga-g----c--------------------------------
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    21268 29 +     22452 T-TT-C--A--AA-G----C-TCTG-G-CCCC-AT--A--TTT-TA-AA--A
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            140198  9 +   3060487 t-tt-c--a--aa-g----c--------------------------------
i Lipotes_vexillifer.KE558548.1                         I 1 C 0
s Lophocebus_aterrimus.ctg711                              183279 30 +    570588 T-TT-C--A--AA-G----CTGCTG-G-TCCC-AT--C--TTT-TT-AA--A
i Lophocebus_aterrimus.ctg711                           I 55 n 30
s Loris_lydekkerianus.k141_550999                           15664 26 +     84689 t-ct-c--a--aaag----tctctg-g-ttcc-ac--a--ttt---------
i Loris_lydekkerianus.k141_550999                       C 0 I 4
s Loris_tardigradus.ctg97                                 3783402 26 +   6799190 t-ct-c--a--aaag----tctctg-g-ttcc-ac--a--ttt---------
i Loris_tardigradus.ctg97                               C 0 I 4
s Loxodonta_africana.GL010040.1                          20599186 30 -  62548349 t-tt-c--a--aa-g----tctctg-a-tcac-ac--a--ttt-tt-aa--a
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11095598  9 +  39895028 T-TT-C--A--GA-G----C--------------------------------
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_1195479                              4990 30 -     15622 T-TT-C--A--AA-G----CTGCTG-G-TCCC-AT--C--TTT-TT-AA--A
i Macaca_arctoides.k141_1195479                         I 55 C 0
s Macaca_assamensis.Contig48                             12919032 30 +  19716213 T-TT-C--A--AA-G----CTGCTG-G-TCCC-AT--C--TTT-TT-AA--A
i Macaca_assamensis.Contig48                            I 55 C 0
s Macaca_cyclopis.k119_883699                                3643 30 -     26467 T-TA-C--A--AA-G----CCTCTG-G-TCCC-AC--C--TTC-TT-GA--G
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_671072                            4886 30 -     23403 T-TT-C--A--AA-G----CTGCTG-G-TCCC-AT--C--TTT-TT-AA--A
i Macaca_fascicularis.k141_671072                       I 69 n 30
s Macaca_fuscata.k119_938422                                 3624 30 -     26361 T-TA-C--A--AA-G----CCTCTG-G-TCCC-AC--C--TTC-TT-GA--G
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_674993                                 4942 30 +     16544 T-TT-C--A--AA-G----CTGCTG-G-TCCC-AT--C--TTT-TT-AA--A
i Macaca_leonina.k141_674993                            I 55 C 0
s Macaca_maura.k141_188832                                   5322 30 -     30208 T-TT-C--A--AA-G----CTGCTG-G-TCCC-AT--C--TTT-TT-AA--A
i Macaca_maura.k141_188832                              I 55 C 0
s Macaca_mulatta.NC_041755.1                            108307029 30 + 196197964 T-TT-C--A--AA-G----CTGCTG-G-TCCC-AT--C--TTt-tt-aa--a
i Macaca_mulatta.NC_041755.1                            N 0 C 0
s Macaca_nemestrina.KQ004885.1                           11450311 30 +  11645122 T-TA-C--A--AA-G----CCTCTG-G-TCCC-GC--C--TTC-TT-GA--G
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_2105412                                  4850 30 -     16799 T-TT-C--A--AA-G----CTGCTG-G-TCCC-AT--C--TTT-TT-AA--A
i Macaca_nigra.k141_2105412                             I 55 C 0
s Macaca_radiata.k141_339052                                 4926 30 -     65833 T-TT-C--A--AA-G----CTGCTG-G-TCCC-AT--C--TTT-TT-AA--A
i Macaca_radiata.k141_339052                            I 55 C 0
s Macaca_siberu.k141_901100                                  5292 30 +     15974 T-TT-C--A--AA-G----CTGCTG-G-TCCC-AT--C--TTT-TT-AA--A
i Macaca_siberu.k141_901100                             I 55 C 0
s Macaca_silenus.Contig28                                 7966926 30 +  28972174 T-TT-C--A--AA-G----CTGCTG-G-TCCC-AT--C--TTT-TT-AA--A
i Macaca_silenus.Contig28                               I 69 n 30
s Macaca_thibetana.k99_374025                                 159 30 +      8300 T-TT-C--A--AA-G----CTGCTG-G-TCCC-AT--C--TTT-TT-AA--A
i Macaca_thibetana.k99_374025                           I 69 n 30
s Macaca_tonkeana.k141_476106                                3912 30 -     15846 T-TT-C--A--AA-G----CTGCTG-G-TCCC-AT--C--TTT-TT-AA--A
i Macaca_tonkeana.k141_476106                           I 69 C 0
s Mandrillus_leucophaeus.scaffold126                      7795816 30 -  48617986 T-TT-C--A--AA-G----CTGCTG-G-TCCC-AT--C--TTT-TT-AA--A
i Mandrillus_leucophaeus.scaffold126                    I 55 C 0
s Mandrillus_sphinx.Contig18                              8135942 30 -  29546661 T-TT-C--A--AA-G----CTGCTG-G-TCCC-AT--C--TTT-TT-AA--A
i Mandrillus_sphinx.Contig18                            I 55 C 0
s Manis_javanica.JSZB01003966.1                            152577  2 +    252755 --------------G----C--------------------------------
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             40171  2 +     58827 --------------G----C--------------------------------
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36878643 13 +  64221397 t-tc-c--a--aa-g----catct----------------------------
i Marmota_marmota.CZRN01000005.1                        C 0 I 14
s Megaderma_lyra.MegLyr_scaffold_3562                       66005  9 -    234502 t-tt-c--a--aa-g----c--------------------------------
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             6975  9 -     87323 T-TT-C--A--AA-A----C--------------------------------
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 1668 22 +    115071 ---------------------TCTT-G-ACCT-TG--TTTTGA-AA-AA--A
i Meriones_unguiculatus.MerUng_scaffold_9483            I 9 I 7
s Mesocricetus_auratus.KB708139.1                         1051942  6 -  26018355 ------------------------------------------a-aa-at--a
i Mesocricetus_auratus.KB708139.1                       I 14 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    2855  9 -     12939 T-TT-C--A--AA-G----C--------------------------------
i Mesoplodon_bidens.MesBid_scaffold_96348               I 1 C 0
s Microcebus_murinus.CM007691.1                          16514844 31 +  47401472 T-TT-C--A--AA-G----CTTCTT-T-CCCC-Ac--c--ttt-tttca--a
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  41871 30 -     48017 t-tt-c--a--ca-g----tgtcta-a-tcac-ac--a--ttt-ta-aa--a
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               25358  9 -     32043 A-TT-C--A--AA-G----C--------------------------------
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22825003 34 -  98408828 G-GC-C--ATATA-G----CCTCTT-G-GTCt-tg--ttt-tagaa-at--a
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8213411  9 +  10048721 t-ct-c--a--aa-g----c--------------------------------
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            37902  9 +     45743 t-ct-c--a--aa-g----c--------------------------------
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         6576 30 +     29742 t-ta-c--a--aa-g----cctctg-g-tccc-ac--c--ttc-tt-ga--g
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        17341  9 -    104932 t-tt-c--a--ga-g----c--------------------------------
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     5528 31 -     12809 t-tt-c--a--aa-g----cttctt-g-cccc-ac--c--ttt-tttca--a
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 150629  9 +    154973 t-tt-c--a--aa-g----c--------------------------------
i Monodon_monoceros.MonMon_M_scaffold_5598              I 1 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                163889  9 +    265003 t-tt-c--a--aa-g----c--------------------------------
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  6655  9 -     19904 T-TT-C--A--AA-G----C--------------------------------
i Moschus_moschiferus.MosMos_scaffold_78805             I 1 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  150717  9 -    168139 t-tt-c--a--ga-g----c--------------------------------
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          24819  9 -    100666 T-TC-C--A--AA-G----C--------------------------------
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.FMAL02028947.1                                   141 32 -      2058 G-TC-C--A--TA-G----TCACTC-G-ATCT-TG--TTTTGA-aa-ct--a
i Mus_caroli.FMAL02028947.1                             I 6 I 17
s Mus_musculus.chr16                                     75494288 32 +  98207768 G-GC-C--A--TA-G----CCACTC-G-ATCT-TG--TTCTGA-Aa-ct--a
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67561040 32 +  89017189 G-GC-C--G--TA-G----CCACTC-G-ATCT-TG--Ttttga-aa-ct--a
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74337014 32 +  97876770 G-GC-C--A--TA-G----CCACTC-A-ATCT-TG--TTTTGA-aa-ct--a
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             15276 30 +     98495 t-tt-c--a--aa-g----cctcgt-t-tctc-ac--a--ttt-aa-aa--a
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4429081  9 -  28371801 t-tt-c--a--aa-g----c--------------------------------
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     94244 26 -    117718 T-GA-C--A--AA-T----TCTCTT-G-TCCC-AC--A--GTT-A-------
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 I 2
s Myotis_brandtii.KE161952.1                               971698  9 +   8389877 t-tt-c--a--aa-g----c--------------------------------
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5023118  9 +   6462685 t-tt-c--a--aa-g----c--------------------------------
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3469202  9 -   3747815 t-tt-c--a--aa-g----c--------------------------------
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        14443  9 +     66751 t-tt-c--a--aa-g----c--------------------------------
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             8065 31 -      8794 A-TT-A--A-AAA-G----TCTTAG-G-ATAT-AC--A--TTT-TT-TA--A
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            241019 30 -    362372 T-TC-C--A--TA-G----CCTTGT-G-gccc-at--g--ttt-ta-aa--a
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_1382660                              4233 29 +      5784 t-tt-c--a--aa-g----ctgctg-g-tccc-at--c--ttt-tt--a--a
i Nasalis_larvatus.k141_1382660                         C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4490739  9 -  14209539 t-tt-c--a--ga-g----c--------------------------------
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3955220  9 -   4490290 t-tt-c--a--aa-g----c--------------------------------
i Neophocaena_asiaeorientalis.KZ688543.1                I 1 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  50957  9 +     94413 t-tt-c--a--aa-g----c--------------------------------
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_1526257                           6795 30 +     11411 T-TT-C--A--AA-G----CCTCTG-G-TCCC-AT--C--TTT-TT-AA--G
i Nomascus_annamensis.k141_1526257                      I 7 n 30
s Nomascus_concolor.k141_523891                              1295 30 +      1566 T-TT-C--A--AA-G----CCTCTG-G-TCCC-AT--C--TTT-TT-AA--G
i Nomascus_concolor.k141_523891                         C 0 C 0
s Nomascus_gabriellae.k141_989974                            6530 30 -     13151 T-TT-C--A--AA-G----CCTCTG-G-TCCC-AT--C--TTT-TT-AA--G
i Nomascus_gabriellae.k141_989974                       I 7 n 30
s Nomascus_siki_b.tarseq_44                          10087571 30 -  26722205 T-TT-C--A--AA-G----CCTCTG-G-TCCC-AT--C--TTT-TT-AA--G
i Nomascus_siki_b.tarseq_44                         C 0 C 0
s Nomascus_siki_a.k141_1166812                                  534 30 -      5137 T-TT-C--A--AA-G----CCTCTG-G-TCCC-AT--C--TTT-TT-AA--A
i Nomascus_siki_a.k141_1166812                            I 7 n 30
s Nyctereutes_procyonoides.CAJHUB010000786.1                38463  9 +   3668941 T-TT-C--A--GA-G----C--------------------------------
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65572327 26 -  95554990 t-tt-c--a--aaag----tctctg-g-ttcc-ac--a--ttt---------
i Nycticebus_bengalensis.LG16                           C 0 I 4
s Nycticebus_coucang.k141_771591                            15737 26 +     16181 T-TT-C--A--AAAG----TCTCTG-G-TTCC-AC--A--TTT---------
i Nycticebus_coucang.k141_771591                        C 0 I 4
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65680515 26 +  89412551 t-ct-c--a--aaag----tctctg-g-ttcc-ac--a--ttt---------
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 I 4
s Ochotona_princeps.JH802095.1                            5000312 26 -  23139505 T-TG-C--A--AA-G----CGCCTG-G-gccc-at--a--ttt-t-------
i Ochotona_princeps.JH802095.1                          C 0 I 4
s Octodon_degus.JH651621.1                                3689732 26 +  10294119 T-GC-C--A--AA-T----TCTCTT-G-TCAC-ac--a--gtt-a-------
i Octodon_degus.JH651621.1                              C 0 I 2
s Odobenus_rosmarus.KB229369.1                             685443  9 -   3126709 t-tt-c--a--ga-g----c--------------------------------
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1084085  9 +   1425656 T-TT-C--A--AA-G----C--------------------------------
i Odocoileus_virginianus.KZ101650.1                     I 1 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         42155  9 +     78940 T-TT-C--A--AA-G----C--------------------------------
i Okapia_johnstoni.LVCL01S0017931.1                     I 1 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  130799 38 +    145789 G-GC-T--GTATA-GCCAGCCTCTT-G-GTCT-TG--TTT-TAGAA-AT--A
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  43499 31 +     62360 T-GC-C--A--TA-G----CCTCTT-G-TTCT-TG--TTT-CA-AA-CT--A
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7228894  9 -   7562323 t-tt-c--a--aa-g----c--------------------------------
i Orcinus_orca.KB316965.1                               I 1 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              64596 29 -     66828 t-tt-t--a--ag-g----tctct--a-tcac-ac--a--ttt-ta-aa--a
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141884285 29 + 163896628 T-TT-C--A--AA-G----C-TCTG-g-cccc-at--a--ttt-ta-aa--a
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      315601  9 -    505867 T-TT-C--A--GA-G----C--------------------------------
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        5563 30 -     53940 t-ct-c--a--aa-g----tctctg-g-ttcc-ac--c--ttt-tc-ca--a
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18013532 30 -  38779656 T-CT-C--A--AA-G----TCTCTG-G-TTCC-AC--C--TTT-TC-CA--A
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134083092  9 - 275406953 t-tt-c--a--aa-g----c--------------------------------
i Ovis_aries.CM001582.2                                 I 1 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      84326  9 +    140051 T-TT-C--A--AA-G----C--------------------------------
i Ovis_canadensis.OviCan_scaffold_6251                  I 1 C 0
s Pan_paniscus.CM003386.1                                53339844 30 + 205426864 T-TT-C--A--AA-G----TCGCTG-G-Tccc-at--c--ttt-tt-aa--a
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                             52442765 30 + 196562556 T-TT-C--A--AA-G----TCGCTG-G-Tccc-at--c--ttt-tt-aa--a
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  40337  9 +    295523 t-tt-c--a--ga-g----c--------------------------------
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3644152  9 +  18214204 t-tt-c--a--ga-g----c--------------------------------
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5033800  9 -   6340057 t-tt-c--a--ga-g----c--------------------------------
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1071963  9 -   1292953 T-TT-C--A--AA-G----C--------------------------------
i Pantholops_hodgsonii.KE114631.1                       I 1 C 0
s Papio_anubis.CM001492.2                               104807499 30 - 188283584 T-TT-C--A--AA-G----CTGCTG-G-tccc-at--c--ttt-tt-aa--a
i Papio_anubis.CM001492.2                               N 0 C 0
s Papio_cynocephalus.k141_4279166                            1610 30 +     14039 T-TT-C--A--AA-G----CTGCTG-G-TCCC-AT--C--TTT-TT-AA--A
i Papio_cynocephalus.k141_4279166                       I 55 C 0
s Papio_hamadryas.Contig2                                43125198 30 -  77290729 T-TT-C--A--AA-G----CTGCTG-G-TCCC-AT--C--TTT-TT-AA--A
i Papio_hamadryas.Contig2                               I 55 C 0
s Papio_kindae.k141_3207681                                 22664 30 +     50820 T-TT-C--A--AA-G----CTGCTG-G-TCCC-AT--C--TTT-TT-AA--A
i Papio_kindae.k141_3207681                             I 55 C 0
s Papio_papio.k141_1769448                                   5315 30 -     34951 T-TT-C--A--AA-G----CTGCTG-G-TCCC-AT--C--TTT-TT-AA--A
i Papio_papio.k141_1769448                              I 55 n 30
s Papio_ursinus.k141_4903560                                 1587 30 +     19798 T-TT-C--A--AA-G----CTGCTG-G-TCCC-AT--C--TTT-TT-AA--A
i Papio_ursinus.k141_4903560                            I 55 n 30
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    121819  9 -    135482 T-TT-C--A--GA-G----C--------------------------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          11227 30 -     23713 t-ct-c--a--aa-g----tctctg-g-ttcc-ac--c--ttt-tc-ca--a
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           12378 30 +     61070 t-ct-c--a--aa-g----tctctg-g-ttcc-ac--c--ttt-tc-ca--a
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       2674 30 +     49596 T-TC-A--A--AA-G----CCTCTT-G-CCCA-TC--T--TTT-TG-AC--A
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4955863 31 -   8017169 T-AC-C--A--TA-G----CCTCTT-G-CTCT-Tg--ttt-ca-aa-ac--a
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              3361  9 +      8220 T-TT-C--A--AA-G----C--------------------------------
i Phocoena_phocoena.PhoPho_flattened_line_53071         I 1 C 0
s Piliocolobus_badius.k141_512007                           29757 30 +     37672 t-tt-c--a--aa-g----ctgctg-g-tccc-at--c--ttt-tt-aa--a
i Piliocolobus_badius.k141_512007                       C 0 C 0
s Piliocolobus_gordonorum.k141_736355                       29674 30 +     67079 t-tt-c--a--aa-g----ctgctg-g-tccc-at--c--ttt-tt-aa--a
i Piliocolobus_gordonorum.k141_736355                   C 0 C 0
s Piliocolobus_kirkii.k141_451083                            4838 30 -     13367 T-TT-C--A--AA-G----CTGCTG-G-TCCC-AT--C--TTT-TT-AA--A
i Piliocolobus_kirkii.k141_451083                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000342.1                3428439 30 -   4356645 T-TT-C--A--AA-G----CTGCTG-G-Tccc-at--c--ttt-tt-aa--a
i Piliocolobus_tephrosceles.PDMG02000342.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            99979  9 +    112873 T-TT-C--A--AA-G----C--------------------------------
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           9839  9 +     21690 T-TT-C--A--AA-G----C--------------------------------
i Platanista_gangetica.PlaMin_flattened_line_72990      I 1 C 0
s Plecturocebus_bernhardi.k141_959214                       26513 30 +     44506 T-TG-C--A--AA-G----TCACTG-G-CACC-AC--C--TTC-TT-AA--G
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        26726 30 +     67491 T-TG-C--A--AA-G----TCACTG-G-CACC-AC--C--TTC-TT-AA--G
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      16965 30 -     98129 T-TG-C--A--AA-G----TCACTG-G-CACC-AC--C--TTC-TT-AA--G
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     26566 30 +    147771 T-TG-C--A--AA-G----TCACTG-G-CACC-AC--C--TTC-TT-AA--G
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         3201 30 -     43940 T-TG-C--A--AA-G----TCACTG-G-CACC-AC--C--TTC-TT-AA--G
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          7284 30 -     55515 T-TG-C--A--AA-G----TCACTG-G-CACC-AC--C--TTC-TT-AA--G
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         26638 30 +    152463 T-TG-C--A--AA-G----TCACTG-G-CACC-AC--C--TTC-TT-AA--G
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       4446 30 -    119457 T-TG-C--A--AA-G----TCACTG-G-CACC-AC--C--TTC-TT-AA--G
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         16360 30 +    134592 T-TG-C--A--AA-G----TCACTG-G-CACC-AC--C--TTC-TT-AA--G
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          26948 30 -     75465 T-TG-C--A--AA-G----TCACTG-G-CACC-AC--C--TTC-TT-AA--G
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.CM009265.2                               104014532 30 - 193656255 T-TT-C--A--AA-G----CCACTG-G-Tccc-at--c--ttt-tt-aa--a
i Pongo_abelii.CM009265.2                               C 0 C 0
s Pongo_pygmaeus.ctg127                                   6237494 30 -   6432864 T-TT-C--A--AA-G----CCACTG-G-TCCC-AT--C--TTT-TT-AA--A
i Pongo_pygmaeus.ctg127                                 C 0 C 0
s Presbytis_comata.k141_678168                              10964 30 +     11126 T-TT-C--A--AA-G----CTGCTG-G-TCCC-AT--C--TTT-TT-AA--A
i Presbytis_comata.k141_678168                          C 0 C 0
s Presbytis_mitrata.k141_1767317                            10953 30 +     15869 T-TT-C--A--AA-G----CTGCTG-G-TCCC-AT--C--TTT-TT-AA--A
i Presbytis_mitrata.k141_1767317                        C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                4371 30 -      9567 T-GT-C--A--AA-G----TCTCTG-A-TCAC-AT--G--TTT-TT-AA--A
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6853190 30 +  12164890 T-TT-C--A--AA-G----CCTCTG-G-CCCC-AC--C--TTT-TT-CA--A
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     21997 30 -     30946 N-NN-N--N--NN-N----NNNNNN-N-NNNN-NN--N--NNN-NN-NN--N
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         8274 30 +     11805 T-TT-C--A--AA-G----CCTCTA-C-CCCC-AC--C--TTT-TT-CA--A
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           47608 30 +     52369 T-TT-C--A--AA-G----CCTCTG-C-CCTC-AC--C--TTT-TT-CA--A
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         39995 30 -     44753 t-tt-c--a--aa-g----cctctg-c-cccc-ac--c--ttt-tt-ca--a
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            21918 30 +     27322 T-TT-C--A--AA-G----CCTCTG-C-CCTC-AC--C--TTT-TT-CA--A
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       21567 30 -     53241 T-TT-C--A--AA-G----CCTCTG-C-CCCC-AC--C--TTT-TT-CA--A
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         43830 30 -     48185 T-TT-C--A--AA-G----CCTCTG-C-CCCC-AC--C--TTT-TT-CA--A
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           38663 22 +     77221 ---------------------TCTT-g-atct-tg--ttttga-aa-aa--a
i Psammomys_obesus.NESX01026517.1                       I 9 C 0
s Pteronotus_parnellii.KE867983.1                            6539  9 -     27784 t-tt-c--a--aa-g----c--------------------------------
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        250728  9 -    344369 T-TT-C--A--AA-G----C--------------------------------
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Puma_concolor.QAVW01000427.1                          131540449  9 - 161321710 t-tt-c--a--ga-g----c--------------------------------
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_951151                              2990 30 -      8225 t-tt-c--a--aa-g----ctgctg-g-tccc-at--c--ttt-tt-aa--a
i Pygathrix_cinerea.k141_951151                         C 0 C 0
s Pygathrix_nigripes_b.ctg25                                14340826 30 -  15297009 t-tt-c--a--aa-g----ctgctg-g-tccc-at--c--ttt-tt-aa--a
i Pygathrix_nigripes_b.ctg25                               C 0 C 0
s Pygathrix_nigripes_a.k141_758202                             3007 30 -      8240 t-tt-c--a--aa-g----ctgctg-g-tccc-at--c--ttt-tt-aa--a
i Pygathrix_nigripes_a.k141_758202                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                20950  9 +     68503 T-TT-C--A--AA-G----C--------------------------------
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 1 C 0
s Rattus_norvegicus.chr11                                13918073 32 +  90463843 G-GC-C--A--TT-G----CCTctc-a-atat-tg--ttttaa-aa-at--a
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1793034  9 +   2252614 t-tt-c--a--aa-g----c--------------------------------
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   152255289 30 - 206558726 T-TT-C--A--AA-G----CTGCTG-G-Tccc-at--c--ttt-tt-aa--a
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg241                            462097 30 +   1472273 t-tt-g--a--aa-g----ctgctg-g-tccc-at--c--ttt-tt-aa--a
i Rhinopithecus_strykeri.ctg241                         C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                      1361  9 -      4338 T-TT-C--A--AA-G----C--------------------------------
i Saiga_tatarica.SaiTat_scaffold_371890                 I 1 C 0
s Saimiri_boliviensis.NW_024100938.1                     15676970 30 -  43202129 T-TG-C--A--AA-G----CCACTG-G-CCCC-AC--C--TTC-TT-AA--G
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        8883 30 +     34089 T-TG-C--A--AA-G----CCACTG-G-CCCC-AC--C--TTC-TT-AA--G
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              8823 30 -     60842 T-TG-C--A--AA-G----CCACTG-G-CCCC-AC--C--TTC-TT-AA--G
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              8917 30 +     67014 T-TG-C--A--AA-G----CCACTG-G-CCCC-AC--C--TTC-TT-AA--G
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              8894 30 +     60816 T-TG-C--A--AA-G----CCACTG-G-CCCC-AC--C--TTC-TT-AA--G
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 8831 30 -     76454 T-TG-C--A--AA-G----CCACTG-G-CCCC-AC--C--TTC-TT-AA--G
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17345616 30 -  30362882 t-tg-c--a--aa-g----ccgctg-g-cccc-ac--c--ttc-tt-aa--g
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         24937 30 -     62485 t-tg-c--a--aa-g----ccgctg-g-cccc-ac--c--ttc-tt-aa--g
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   40029  9 -    114521 T-TT-A--C--AA-A----G--------------------------------
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1743075                       45535 30 +     45790 T-TT-C--A--AA-G----CTGCTG-G-TCCC-AT--C--TTT-TT-AA--A
i Semnopithecus_entellus.k141_1743075                   C 0 C 0
s Semnopithecus_hypoleucos.k141_2141024                      1308 30 -      8815 T-TT-C--A--AA-G----CTGCTG-G-TCCC-AT--C--TTT-TT-AA--A
i Semnopithecus_hypoleucos.k141_2141024                 C 0 C 0
s Semnopithecus_johnii.k141_1300894                          1325 30 +     13764 T-TT-C--A--AA-G----CTGCTG-G-TCCC-AT--C--TTT-TT-AA--A
i Semnopithecus_johnii.k141_1300894                     C 0 C 0
s Semnopithecus_priam.k141_368201                           10064 30 -     20692 T-TT-C--A--AA-G----CTGCTG-G-TCCC-AT--C--TTT-TT-AA--A
i Semnopithecus_priam.k141_368201                       C 0 C 0
s Semnopithecus_schistaceus.k141_628310                     45609 30 -     53123 T-TT-C--A--AA-G----CTGCTG-G-TCCC-AT--C--TTT-TT-AA--A
i Semnopithecus_schistaceus.k141_628310                 C 0 C 0
s Semnopithecus_vetulus.k141_748269                          4663 30 +     17284 T-TT-C--A--AA-G----CTGCTG-G-TCCC-AT--C--TTT-TT-AA--A
i Semnopithecus_vetulus.k141_748269                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  105861 31 -    120886 T-GC-C--A--TA-G----CCTCTT-G-GACT-TG--ATT-CC-AA-AT--A
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            23985  9 +    739146 T-TT-G--A--AG-G----C--------------------------------
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17774212  3 -  27805282 ------------A-A----C--------------------------------
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2244476 14 +   2842873 T-TC-G--A--AA-G----CCTCtt---------------------------
i Spermophilus_dauricus.KZ294190.1                      C 0 I 14
s Spilogale_gracilis.SpiGra_flattened_line_905             239518  9 -    276980 t-tt-c--a--ga-g----c--------------------------------
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            33632  9 +     62062 t-tt-c--a--ga-g----c--------------------------------
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189275421  1 + 218635234 A---------------------------------------------------
i Sus_scrofa.CM000824.4                                 I 1 C 0
s Symphalangus_syndactylus.tarseq_190                     4045964 30 -  10168602 t-tt-c--a--aa-g----cctctg-g-tccc-at--c--ttt-tt-aa--g
i Symphalangus_syndactylus.tarseq_190                   C 0 n 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                2767  9 +     20549 t-ct-c--a--aa-g----c--------------------------------
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               17738 31 +     45698 A-TT-A--A-AAA-G----TCTTAG-G-ATAT-AC--A--TTT-GG-TA--A
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      811236  9 +   1148477 g-at-c--a--aa-g----c--------------------------------
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  61878  9 +     99546 G-AT-C--A--AA-G----C--------------------------------
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       106203301 30 - 194193292 T-TT-C--A--AA-G----CTGCTG-G-tccc-at--c--ttt-tt-aa--a
i Theropithecus_gelada.CM009951.1                       N 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                   820 26 -      3104 --------a--aa-g----tcttag-g-tcac-ac--a--ttt-tt-aa--a
i Tolypeutes_matacus.TolMat_scaffold_475685             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  138535  9 -    259118 t-tt-t--a--aa-g----c--------------------------------
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_672638                         4908 30 +     38635 T-TT-C--A--AA-G----CTGCTG-G-TCCC-AT--C--TTT-TT-AA--A
i Trachypithecus_auratus.k141_672638                    C 0 C 0
s Trachypithecus_crepusculus.k141_863597                     4901 30 -     23436 T-TT-C--A--AA-G----CTGCTG-G-TCCC-AT--C--TTT-TT-AA--A
i Trachypithecus_crepusculus.k141_863597                C 0 C 0
s Trachypithecus_cristatus.k141_968903                      32550 30 +     43409 T-TT-C--A--AA-G----CTGCTG-G-TCCC-AT--C--TTT-TT-AA--A
i Trachypithecus_cristatus.k141_968903                  C 0 C 0
s Trachypithecus_francoisi.k141_1012484                       834 30 +      8809 T-TT-C--A--AA-G----CTGCTG-G-TCCC-AT--C--TTT-TT-AA--A
i Trachypithecus_francoisi.k141_1012484                 C 0 C 0
s Trachypithecus_geei.k141_137495                           30063 30 -     42322 t-tt-c--a--aa-g----ctgctg-g-tccc-at--c--ttt-tt-aa--a
i Trachypithecus_geei.k141_137495                       C 0 C 0
s Trachypithecus_germaini.k141_240878                        5028 30 -     24955 T-TT-C--A--AA-G----CTGCTG-G-TCCC-AT--C--TTT-TT-AA--A
i Trachypithecus_germaini.k141_240878                   C 0 C 0
s Trachypithecus_hatinhensis.k141_641377                     1199 30 +      1365 T-TT-C--A--AA-G----CTGCTG-G-TCCC-AT--C--TTT-TT-AA--A
i Trachypithecus_hatinhensis.k141_641377                C 0 C 0
s Trachypithecus_laotum.k141_897381                         45603 30 -     53586 T-TT-C--A--AA-G----CTGCTG-G-TCCC-AT--C--TTT-TT-AA--A
i Trachypithecus_laotum.k141_897381                     C 0 C 0
s Trachypithecus_leucocephalus.k141_352489                   1174 30 +      9423 T-TT-C--A--AA-G----CTGCTG-G-TCCC-AT--C--TTT-TT-AA--A
i Trachypithecus_leucocephalus.k141_352489              C 0 C 0
s Trachypithecus_melamera.k141_950981                        2189 30 -      3512 T-TT-C--A--AA-G----CTGCTG-G-TCCC-AT--C--TTT-TT-AA--A
i Trachypithecus_melamera.k141_950981                   C 0 C 0
s Trachypithecus_obscurus.k141_588024                        4913 30 +      4963 T-TT-C--A--AA-G----CTGCTG-G-TCCC-AT--C--TTT-TT-AA--A
i Trachypithecus_obscurus.k141_588024                   C 0 C 0
s Trachypithecus_phayrei.ctg364                            232412 30 -   1198723 t-tt-c--a--aa-g----ctgctg-g-tccc-at--c--ttt-tt-aa--a
i Trachypithecus_phayrei.ctg364                         C 0 C 0
s Trachypithecus_pileatus.k141_532233                       30083 30 -     40754 t-tt-c--a--aa-g----ctgctg-g-tccc-at--c--ttt-tt-aa--a
i Trachypithecus_pileatus.k141_532233                   C 0 C 0
s Trichechus_manatus.JH594618.1                          16090268 23 +  31416278 --------------g----tctctt-a-tgac-at--a--ttt-tt-aa--a
i Trichechus_manatus.JH594618.1                         I 5 C 0
s Tupaia_chinensis.KB320831.1                             2801540 31 -   3938065 CCTT-C--A--GA-G----CCTCTG-A-TATC-AC--A--TTC-TT-GA--A
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                   10361 33 +     13056 CCTT-C--A--GA-G----CCTCTG-A-TATC-ACACA--CTC-TT-GA--A
i Tupaia_tana.TupTan_flattened_line_68454               I 204 C 0
s Tursiops_truncatus.MRVK01000923.1                      69317624  9 -  96451834 t-tt-c--a--aa-g----c--------------------------------
i Tursiops_truncatus.MRVK01000923.1                     I 1 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                     485  9 +    136657 T-TC-A--C--AA-A----A--------------------------------
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 C 0
s Ursus_maritimus.KK498671.1                              6521151  9 +  28682327 t-tt-c--a--ga-g----c--------------------------------
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  9832 30 -     20643 t-tt-c--a--aa-g----cctctg-g-cccc-at--c--ttt-tt-ca--a
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             29367 30 -     33872 t-tt-c--a--aa-g----cctctg-g-cccc-at--c--ttt-tt-ca--a
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1528664  9 -   2331223 T-TT-C--A--AA-G----C--------------------------------
i Vicugna_pacos.KN269600.1                              I 1 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                144828  9 -    281493 T-TT-C--A--GA-G----C--------------------------------
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       131965 30 -    134049 T-TC-C--A--AA-G----CCTCTT-T-TTCT-AC--A--GTT-Aa-aa--a
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_202118                     1479 11 -      3360 ---------------------------------AA--A--ACA-TA-AA--A
i Zapus_hudsonius.ZapHud_scaffold_202118                N 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        220300  9 -    227762 t-tt-c--a--ga-g----c--------------------------------
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            2363  9 -     13665 T-TT-C--A--AA-G----C--------------------------------
i Ziphius_cavirostris.ZipCav_flattened_line_60625       I 1 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Petromus_typicus.PetTyp_scaffold_33007                    17492  0 -     36578 C
e Tragulus_javanicus.TraJav_scaffold_14717                   9488 743 +     90398 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Tarsius_wallacei.k141_48636                               64696  0 +     65473 C
e Tarsius_lariang.k141_609102                               31387  0 +     42269 C
e Rhinopithecus_bieti.k119_554384                            2917  0 -     17045 C
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Cephalopachus_bancanus.k141_702587                        12545  0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530  0 +    345090 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               17984 1 +    209709 A
s Acinonyx_jubatus.LLWD01000356.1                         2039932 1 +   3721120 a
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    118299 1 -    189883 T
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10663892 1 +  23371972 a
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7100418 1 -  16596857 A
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_141108                   1670 1 -      7259 A
i Allactaga_bullata.AllBul_scaffold_141108              C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   5858 1 -     60446 A
i Allenopithecus_nigroviridis.k141_2469532              I 30 C 0
s Allochrocebus_lhoesti.k141_2676980                        46525 1 +     59001 A
i Allochrocebus_lhoesti.k141_2676980                    C 0 I 3
s Allochrocebus_preussi.k141_1108977                         5513 1 +     38766 a
i Allochrocebus_preussi.k141_1108977                    I 30 C 0
s Allochrocebus_solatus.k141_3029467                         1157 1 +      1260 A
i Allochrocebus_solatus.k141_3029467                    C 0 n 0
s Alouatta_belzebul.k141_276091                              1453 1 +     19852 a
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                3697 1 -     12443 a
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                              996 1 +      5070 a
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                  741 1 -      1641 a
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          3480 1 -     24210 a
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           30062 1 -     30219 a
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_405616                              5898 1 +     16794 a
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                            1030 1 -      1470 a
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             5175 1 -      9835 a
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3525966 1 +   4113121 G
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      392985 1 -    631301 A
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             3399 1 +     55446 A
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 66785 1 +     78111 a
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            9733 1 +     22701 A
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5753689 1 +   9889416 a
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                            10288 1 -    104377 a
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                              10295 1 +     23246 a
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     2824 1 +     11424 A
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        6884 1 +      9265 a
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                11394 1 -     29036 A
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9543583 1 +  39197703 a
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             64857 1 +     85812 a
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                15870 1 +     89302 a
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             20371 1 -     58268 a
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             68365 1 +    119057 a
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              10334 1 -     25888 a
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                11396 1 -     16375 a
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               5012 1 +      6337 a
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26384442 1 +  51448160 a
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        9615 1 -     13118 a
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   48430 1 -     72089 A
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   302569 1 -   6870073 A
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22956667 1 + 161108492 A
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     418908 1 +    998990 A
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22665321 1 + 158972876 A
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               675258 1 +   1914593 A
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               118233 1 -    171031 a
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 17253 1 +    125063 a
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                19300 1 -    216513 a
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       11843 1 -    134917 a
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3223565 1 -   8989139 A
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           401266 1 -  15254737 A
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2977003 1 +   6889770 A
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11526757 1 +  39901454 A
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   21731 1 +     87036 A
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11273440 1 -  35597290 A
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11096151 1 +  39895921 A
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16462936 1 -  44759192 A
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21333910 1 + 157394656 A
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135712265 1 - 157403528 A
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_529800                   650 1 -      2320 A
i Capromys_pilorides.CapPil_scaffold_529800             I 2 N 0
s Carollia_perspicillata.CarPer_scaffold_4436               62408 1 +     67245 A
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_1326                      416 1 -    202837 C
i Castor_canadensis.CasCan_scaffold_1326                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   163076 1 -    276539 A
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cebus_albifrons.Contig22                               18895958 1 -  29618158 a
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                12608 1 -     26817 a
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                16852 1 +     25043 a
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4368011 1 +   7569818 A
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         7768 1 -      9338 A
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6559799 1 +   6739814 a
i Cercocebus_atys.KQ010443.1                            I 30 C 0
s Cercocebus_chrysogaster.k141_1635769                       2069 1 +     20388 A
i Cercocebus_chrysogaster.k141_1635769                  C 0 n 0
s Cercocebus_lunulatus.k141_4634644                          6480 1 -     21101 a
i Cercocebus_lunulatus.k141_4634644                     I 30 C 0
s Cercocebus_torquatus.k141_3969582                         63790 1 -    107033 a
i Cercocebus_torquatus.k141_3969582                     I 30 C 0
s Cercopithecus_ascanius.k141_1579766                        2948 1 -      4795 A
i Cercopithecus_ascanius.k141_1579766                   C 0 I 3
s Cercopithecus_cephus.k141_3893260                          3818 1 +     45019 a
i Cercopithecus_cephus.k141_3893260                     I 30 C 0
s Cercopithecus_diana.k141_2561715                           4094 1 +     15177 a
i Cercopithecus_diana.k141_2561715                      I 30 C 0
s Cercopithecus_hamlyni.k141_955432                          2894 1 -      7769 A
i Cercopithecus_hamlyni.k141_955432                     C 0 n 0
s Cercopithecus_lowei.k141_1996                              5291 1 -     17229 A
i Cercopithecus_lowei.k141_1996                         C 0 I 3
s Cercopithecus_albogularis.ctg86                                350325 1 +  11364408 A
i Cercopithecus_albogularis.ctg86                             C 0 I 3
s Cercopithecus_mona.ctg12                               46482397 1 +  46592721 a
i Cercopithecus_mona.ctg12                              I 30 C 0
s Cercopithecus_neglectus.k141_2169300                        514 1 -     27215 a
i Cercopithecus_neglectus.k141_2169300                  I 30 C 0
s Cercopithecus_nictitans.k141_1129315                       6714 1 +     35577 a
i Cercopithecus_nictitans.k141_1129315                  I 30 C 0
s Cercopithecus_petaurista.k141_64532                        6508 1 -     25661 a
i Cercopithecus_petaurista.k141_64532                   I 30 C 0
s Cercopithecus_pogonias.k141_1631406                         699 1 +     11509 A
i Cercopithecus_pogonias.k141_1631406                   C 0 C 0
s Cercopithecus_roloway.k141_550462                         15329 1 +     34041 A
i Cercopithecus_roloway.k141_550462                     C 0 I 3
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           5006 1 -      6963 c
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           63605 1 -     68416 a
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                           12725 1 +     13308 a
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             9894 1 -     18223 A
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              1632 1 +    188999 A
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           45931 1 +     57117 A
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          50611 1 +     54541 A
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15964802 1 +  43084221 a
i Chinchilla_lanigera.JH721867.1                        I 2 C 0
s Chiropotes_israelita.k141_1189915                         75412 1 +    196370 a
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          19593 1 +     40510 a
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15144234 1 -  15256731 a
i Chlorocebus_aethiops.ctg22                            I 30 C 0
s Chlorocebus_pygerythrus.k141_596994                        4223 1 +     16635 A
i Chlorocebus_pygerythrus.k141_596994                   C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                         13528753 1 + 101219884 a
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_954668              1342 1 -      1738 G
i Chrysochloris_asiatica.ChrAsi_scaffold_954668         N 0 C 0
s Colobus_angolensis.KN983490.1                            283928 1 +    886210 a
i Colobus_angolensis.KN983490.1                         C 0 C 0
s Colobus_guereza.LG08                                   96946817 1 - 156195979 a
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1178012                               72 1 -     11758 A
i Colobus_polykomos.k141_1178012                        n 1 I 3
s Condylura_cristata.JH655880.1                          60622565 1 +  78930452 A
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         2929 1 -      5782 A
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 283075 1 -    399297 A
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53035426 1 +  72327488 T
i Cricetulus_griseus.LT883672.1                         I 8 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              2521 1 -     22648 G
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            57911 1 -     70449 a
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  214690 1 -    956709 A
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 34770 1 -     67205 G
i Ctenomys_sociabilis.CteSoc_scaffold_19489             I 2 I 1581
s Dasyprocta_punctata.DasPun_flattened_line_634             62430 1 -    236241 A
i Dasyprocta_punctata.DasPun_flattened_line_634         I 2 C 0
s Dasypus_novemcinctus.JH568778.1                          186066 1 -   6883506 c
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16849557 1 +  31942871 a
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80041045 1 -  96802777 a
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18701620 1 -  18957592 A
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 326667 1 +    993696 A
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   7299 1 +    151128 A
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   160056 1 +    228994 A
i Dinomys_branickii.DinBra_scaffold_1996                I 2 C 0
s Dipodomys_ordii.KN672545.1                              3660726 1 +   4240102 T
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  3080 1 -     11986 T
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 C 0
s Echinops_telfairi.JH980316.1                           23000333 1 -  44670279 a
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1496646 1 +   1727528 A
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7834587 1 +  15467074 a
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        244240 1 -    369425 a
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01076532.1                            571 1 +      9159 a
i Ellobius_talpinus.LOJH01076532.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85877881 1 +  99434291 a
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4709372 1 +   6522550 A
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5856759 1 -   7175178 a
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13355245 1 +  41866177 a
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          16735 1 +     92910 a
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11541687 1 +  16010500 C
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48781267 1 -  48907691 a
i Erythrocebus_patas.Contig8                            I 30 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          319285 1 +    330699 A
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             65742 1 +     89355 A
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              9705 1 +     13586 A
i Eulemur_albifrons.k141_715837                         I 30 C 0
s Eulemur_collaris.k141_1015201                              2964 1 -      4292 A
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            16101 1 +     36558 A
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            12423 1 +     60246 a
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                15908 1 +    109717 a
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 3891 1 -     19505 A
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                20566 1 +     27497 A
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           23022 1 +     26808 A
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                37754 1 +     46535 A
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              20495 1 -     29447 A
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129899352 1 - 159252932 a
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129286327 1 - 158578461 a
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 27426 1 +     52776 a
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13896577 1 -  19261668 a
i Fukomys_damarensis.KN123630.1                         I 2 C 0
s Galago_moholi.ctg555                                     215731 1 -    847004 a
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           18092 1 -     43889 a
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          15236 1 +     27357 a
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               160004 1 +    324696 a
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    186423 1 -    189561 A
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           16902 1 -     18683 A
i Glis_glis.GliGli_scaffold_79770                       I 1 C 0
s Gorilla_beringei.k141_2641970                               672 1 +      9263 a
i Gorilla_beringei.k141_2641970                         C 0 I 3
s Gorilla_gorilla.LT578340.1                             52344765 1 + 195582420 a
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   80217 1 +    118900 a
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         6494 1 +     10286 a
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             4972 1 -     11661 a
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                            10299 1 +     56096 a
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        33548 1 -     42470 a
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        50171 1 -     54384 a
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              23049 1 +     53719 a
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                33315 1 -     91191 A
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2561069 1 +  31725842 a
i Heterocephalus_glaber.JH602058.1                      I 2 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               63295 1 +     73687 a
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              151075 1 +    277961 A
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      283464 1 -    477199 A
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_7653                6014 1 +     86108 A
i Hipposideros_galeritus.HipGal_scaffold_7653           C 0 C 0
s Hoolock_leuconedys.ctg83                                  28460117 1 -  32676794 A
i Hoolock_leuconedys.ctg83                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 23522 1 -     67322 A
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hylobates_abbotti.k141_1816750                             2169 1 +      3202 A
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1136966                               178 1 +      9785 A
i Hylobates_agilis.k141_1136966                         C 0 C 0
s Hylobates_klossii.k141_468230                              3658 1 +      5464 A
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14629004 1 -  25970782 A
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            1556 1 +      4161 A
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             37866 1 -     60944 A
i Hylobates_pileatus_a.tarseq_592                         C 0 T 754
s Hystrix_cristata.HysCri_scaffold_50788                     9974 1 +     22540 A
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7130803 1 +  13083262 a
i Ictidomys_tridecemlineatus.JH393315.1                 I 8 C 0
s Indri_indri.k141_2197838                                   2013 1 +      3484 a
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              13273 1 +     17520 A
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8579409 1 +  11848649 a
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               27892 1 +     37189 A
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          54452 1 -    147782 A
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    5967 1 +     26176 A
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258411846 1 - 285822530 a
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        29155 1 +     39228 A
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            58519 1 +     63517 A
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        36899 1 -     38897 A
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      2945 1 -     13103 A
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3091854 1 -   3498232 a
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    21297 1 +     22452 A
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            140207 1 +   3060487 a
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19252888 1 +  19376315 a
i Lophocebus_aterrimus.ctg55                            I 30 C 0
s Loris_lydekkerianus.k141_550999                           15694 1 +     84689 a
i Loris_lydekkerianus.k141_550999                       I 4 C 0
s Loris_tardigradus.ctg97                                 3783432 1 +   6799190 a
i Loris_tardigradus.ctg97                               I 4 C 0
s Loxodonta_africana.GL010040.1                          20599216 1 -  62548349 a
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11095607 1 +  39895028 A
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_1195479                              5020 1 -     15622 A
i Macaca_arctoides.k141_1195479                         C 0 n 0
s Macaca_assamensis.Contig48                             12919062 1 +  19716213 A
i Macaca_assamensis.Contig48                            C 0 n 0
s Macaca_cyclopis.k119_883699                                3673 1 -     26467 A
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           51544 1 +     63263 A
i Macaca_fascicularis.k141_155037                       I 30 C 0
s Macaca_fuscata.k119_938422                                 3654 1 -     26361 A
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_674993                                 4972 1 +     16544 A
i Macaca_leonina.k141_674993                            C 0 n 0
s Macaca_maura.k141_188832                                   5352 1 -     30208 A
i Macaca_maura.k141_188832                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            108307059 1 + 196197964 a
i Macaca_mulatta.NC_041755.1                            C 0 N 0
s Macaca_nemestrina.KQ004885.1                           11450341 1 +  11645122 A
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_2105412                                  4880 1 -     16799 A
i Macaca_nigra.k141_2105412                             C 0 C 0
s Macaca_radiata.k141_339052                                 4956 1 -     65833 A
i Macaca_radiata.k141_339052                            C 0 n 0
s Macaca_siberu.k141_901100                                  5322 1 +     15974 A
i Macaca_siberu.k141_901100                             C 0 n 0
s Macaca_silenus.Contig12                                43845485 1 +  43892939 A
i Macaca_silenus.Contig12                               I 30 C 0
s Macaca_thibetana.k99_662710                               21654 1 -     24607 A
i Macaca_thibetana.k99_662710                           I 30 C 0
s Macaca_tonkeana.k141_476106                                3942 1 -     15846 A
i Macaca_tonkeana.k141_476106                           C 0 C 0
s Mandrillus_leucophaeus.scaffold126                      7795846 1 -  48617986 A
i Mandrillus_leucophaeus.scaffold126                    C 0 n 0
s Mandrillus_sphinx.Contig18                              8135972 1 -  29546661 A
i Mandrillus_sphinx.Contig18                            C 0 n 0
s Manis_javanica.JSZB01003966.1                            152579 1 +    252755 T
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             40173 1 +     58827 T
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36878670 1 +  64221397 a
i Marmota_marmota.CZRN01000005.1                        I 14 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       66014 1 -    234502 A
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             6984 1 -     87323 A
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 1697 1 +    115071 A
i Meriones_unguiculatus.MerUng_scaffold_9483            I 7 C 0
s Mesocricetus_auratus.KB708139.1                         1051948 1 -  26018355 t
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    2864 1 -     12939 A
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16514875 1 +  47401472 a
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  41901 1 -     48017 a
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               25367 1 -     32043 A
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22825037 1 -  98408828 a
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8213420 1 +  10048721 A
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            37911 1 +     45743 A
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         6606 1 +     29742 a
i Miopithecus_ogouensis.k141_2935907                    C 0 I 3
s Mirounga_angustirostris.MirAng_flattened_line_8852        17350 1 -    104932 a
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     5559 1 -     12809 a
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 150638 1 +    154973 a
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                163898 1 +    265003 A
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  6664 1 -     19904 A
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  150726 1 -    168139 a
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          24828 1 -    100666 A
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70772266 1 +  92629107 t
i Mus_caroli.LT608236.1                                 I 32 C 0
s Mus_musculus.chr16                                     75494320 1 +  98207768 t
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67561072 1 +  89017189 t
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74337046 1 +  97876770 t
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             15306 1 +     98495 g
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4429090 1 -  28371801 a
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     94272 1 -    117718 A
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 2 I 1795
s Myotis_brandtii.KE161952.1                               971707 1 +   8389877 A
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5023127 1 +   6462685 a
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3469211 1 -   3747815 A
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        14452 1 +     66751 a
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             8096 1 -      8794 C
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            241049 1 -    362372 a
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_1382660                              4262 1 +      5784 a
i Nasalis_larvatus.k141_1382660                         C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4490748 1 -  14209539 a
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3955229 1 -   4490290 a
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  50966 1 +     94413 A
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_762468                             675 1 -      2755 a
i Nomascus_annamensis.k141_762468                       I 30 C 0
s Nomascus_concolor.k141_523891                              1325 1 +      1566 A
i Nomascus_concolor.k141_523891                         C 0 n 0
s Nomascus_gabriellae.k141_1400361                           1226 1 -      2203 a
i Nomascus_gabriellae.k141_1400361                      I 30 C 0
s Nomascus_siki_b.tarseq_44                          10087601 1 -  26722205 A
i Nomascus_siki_b.tarseq_44                         C 0 n 0
s Nomascus_siki_a.k141_421408                                  1140 1 +     16235 a
i Nomascus_siki_a.k141_421408                             I 30 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                38472 1 +   3668941 A
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65572357 1 -  95554990 a
i Nycticebus_bengalensis.LG16                           I 4 C 0
s Nycticebus_coucang.k141_771591                            15767 1 +     16181 A
i Nycticebus_coucang.k141_771591                        I 4 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65680545 1 +  89412551 a
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     I 4 C 0
s Ochotona_princeps.JH802095.1                            5000342 1 -  23139505 a
i Ochotona_princeps.JH802095.1                          I 4 C 0
s Octodon_degus.JH651621.1                                3689760 1 +  10294119 g
i Octodon_degus.JH651621.1                              I 2 I 1647
s Odobenus_rosmarus.KB229369.1                             685452 1 -   3126709 a
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1084094 1 +   1425656 A
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         42164 1 +     78940 A
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  130837 1 +    145789 A
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  43530 1 +     62360 T
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7228903 1 -   7562323 a
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              64625 1 -     66828 a
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141884314 1 + 163896628 a
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      315610 1 -    505867 A
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        5593 1 -     53940 a
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18013562 1 -  38779656 A
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134083101 1 - 275406953 A
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      84335 1 +    140051 A
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                                53339874 1 + 205426864 a
i Pan_paniscus.CM003386.1                               C 0 n 0
s Pan_troglodytes.CM009241.2                             52442795 1 + 196562556 a
i Pan_troglodytes.CM009241.2                            C 0 I 3
s Panthera_onca.PanOnc_flattened_line_1615                  40346 1 +    295523 A
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3644161 1 +  18214204 a
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5033809 1 -   6340057 a
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1071972 1 -   1292953 A
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               104807529 1 - 188283584 a
i Papio_anubis.CM001492.2                               C 0 N 0
s Papio_cynocephalus.k141_4279166                            1640 1 +     14039 A
i Papio_cynocephalus.k141_4279166                       C 0 n 0
s Papio_hamadryas.Contig2                                43125228 1 -  77290729 A
i Papio_hamadryas.Contig2                               C 0 n 0
s Papio_kindae.k141_3207681                                 22694 1 +     50820 A
i Papio_kindae.k141_3207681                             C 0 n 0
s Papio_papio.k141_979496                                   10744 1 +     14967 a
i Papio_papio.k141_979496                               I 30 C 0
s Papio_ursinus.k141_1345919                                 6609 1 -      7628 a
i Papio_ursinus.k141_1345919                            I 30 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    121828 1 -    135482 A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          11257 1 -     23713 a
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           12408 1 +     61070 a
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       2704 1 +     49596 T
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4955894 1 -   8017169 t
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              3370 1 +      8220 A
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Piliocolobus_badius.k141_512007                           29787 1 +     37672 a
i Piliocolobus_badius.k141_512007                       C 0 C 0
s Piliocolobus_gordonorum.k141_736355                       29704 1 +     67079 a
i Piliocolobus_gordonorum.k141_736355                   C 0 C 0
s Piliocolobus_kirkii.k141_451083                            4868 1 -     13367 A
i Piliocolobus_kirkii.k141_451083                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000342.1                3428469 1 -   4356645 a
i Piliocolobus_tephrosceles.PDMG02000342.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            99988 1 +    112873 A
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           9848 1 +     21690 A
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       26543 1 +     44506 A
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        26756 1 +     67491 A
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      16995 1 -     98129 A
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     26596 1 +    147771 A
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         3231 1 -     43940 A
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          7314 1 -     55515 A
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         26668 1 +    152463 A
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       4476 1 -    119457 A
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         16390 1 +    134592 A
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          26978 1 -     75465 A
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.CM009265.2                               104014562 1 - 193656255 a
i Pongo_abelii.CM009265.2                               C 0 n 0
s Pongo_pygmaeus.ctg127                                   6237524 1 -   6432864 A
i Pongo_pygmaeus.ctg127                                 C 0 n 0
s Presbytis_comata.k141_678168                              10994 1 +     11126 A
i Presbytis_comata.k141_678168                          C 0 C 0
s Presbytis_mitrata.k141_1767317                            10983 1 +     15869 A
i Presbytis_mitrata.k141_1767317                        C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                4401 1 -      9567 A
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6853220 1 +  12164890 A
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     22027 1 -     30946 N
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         8304 1 +     11805 A
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           47638 1 +     52369 A
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         40025 1 -     44753 a
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            21948 1 +     27322 A
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       21597 1 -     53241 A
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         43860 1 -     48185 A
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           38685 1 +     77221 a
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            6548 1 -     27784 A
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        250737 1 -    344369 A
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Puma_concolor.QAVW01000427.1                          131540458 1 - 161321710 a
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_951151                              3020 1 -      8225 a
i Pygathrix_cinerea.k141_951151                         C 0 C 0
s Pygathrix_nigripes_b.ctg25                                14340856 1 -  15297009 a
i Pygathrix_nigripes_b.ctg25                               C 0 C 0
s Pygathrix_nigripes_a.k141_758202                             3037 1 -      8240 a
i Pygathrix_nigripes_a.k141_758202                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                20959 1 +     68503 A
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13918105 1 +  90463843 t
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1793043 1 +   2252614 A
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   152255319 1 - 206558726 a
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg241                            462127 1 +   1472273 a
i Rhinopithecus_strykeri.ctg241                         C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                      1370 1 -      4338 A
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15677000 1 -  43202129 A
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        8913 1 +     34089 A
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              8853 1 -     60842 A
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              8947 1 +     67014 A
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              8924 1 +     60816 A
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 8861 1 -     76454 A
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17345646 1 -  30362882 a
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         24967 1 -     62485 a
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   40038 1 -    114521 A
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1743075                       45565 1 +     45790 A
i Semnopithecus_entellus.k141_1743075                   C 0 C 0
s Semnopithecus_hypoleucos.k141_2141024                      1338 1 -      8815 A
i Semnopithecus_hypoleucos.k141_2141024                 C 0 C 0
s Semnopithecus_johnii.k141_1300894                          1355 1 +     13764 A
i Semnopithecus_johnii.k141_1300894                     C 0 C 0
s Semnopithecus_priam.k141_368201                           10094 1 -     20692 A
i Semnopithecus_priam.k141_368201                       C 0 C 0
s Semnopithecus_schistaceus.k141_628310                     45639 1 -     53123 A
i Semnopithecus_schistaceus.k141_628310                 C 0 C 0
s Semnopithecus_vetulus.k141_748269                          4693 1 +     17284 A
i Semnopithecus_vetulus.k141_748269                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  105892 1 -    120886 T
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            23994 1 +    739146 A
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17774215 1 -  27805282 A
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2244504 1 +   2842873 a
i Spermophilus_dauricus.KZ294190.1                      I 14 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             239527 1 -    276980 a
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            33641 1 +     62062 a
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        19263 1 -  13920577 A
i Symphalangus_syndactylus.tarseq_24                    I 69 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                2776 1 +     20549 a
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               17769 1 +     45698 C
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      811245 1 +   1148477 A
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  61887 1 +     99546 A
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       106203331 1 - 194193292 a
i Theropithecus_gelada.CM009951.1                       C 0 N 0
s Tolypeutes_matacus.TolMat_scaffold_475685                   846 1 -      3104 t
i Tolypeutes_matacus.TolMat_scaffold_475685             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  138544 1 -    259118 A
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_672638                         4938 1 +     38635 A
i Trachypithecus_auratus.k141_672638                    C 0 C 0
s Trachypithecus_crepusculus.k141_863597                     4931 1 -     23436 A
i Trachypithecus_crepusculus.k141_863597                C 0 C 0
s Trachypithecus_cristatus.k141_968903                      32580 1 +     43409 A
i Trachypithecus_cristatus.k141_968903                  C 0 C 0
s Trachypithecus_francoisi.k141_1012484                       864 1 +      8809 A
i Trachypithecus_francoisi.k141_1012484                 C 0 C 0
s Trachypithecus_geei.k141_137495                           30093 1 -     42322 a
i Trachypithecus_geei.k141_137495                       C 0 C 0
s Trachypithecus_germaini.k141_240878                        5058 1 -     24955 A
i Trachypithecus_germaini.k141_240878                   C 0 C 0
s Trachypithecus_hatinhensis.k141_641377                     1229 1 +      1365 A
i Trachypithecus_hatinhensis.k141_641377                C 0 C 0
s Trachypithecus_laotum.k141_897381                         45633 1 -     53586 A
i Trachypithecus_laotum.k141_897381                     C 0 C 0
s Trachypithecus_leucocephalus.k141_352489                   1204 1 +      9423 A
i Trachypithecus_leucocephalus.k141_352489              C 0 C 0
s Trachypithecus_melamera.k141_950981                        2219 1 -      3512 A
i Trachypithecus_melamera.k141_950981                   C 0 C 0
s Trachypithecus_obscurus.k141_588024                        4943 1 +      4963 A
i Trachypithecus_obscurus.k141_588024                   C 0 C 0
s Trachypithecus_phayrei.ctg364                            232442 1 -   1198723 a
i Trachypithecus_phayrei.ctg364                         C 0 C 0
s Trachypithecus_pileatus.k141_532233                       30113 1 -     40754 a
i Trachypithecus_pileatus.k141_532233                   C 0 C 0
s Trichechus_manatus.JH594618.1                          16090291 1 +  31416278 a
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2801571 1 -   3938065 A
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                   10394 1 +     13056 A
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69317633 1 -  96451834 a
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                     494 1 +    136657 A
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 C 0
s Ursus_maritimus.KK498671.1                              6521160 1 +  28682327 a
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  9862 1 -     20643 a
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             29397 1 -     33872 a
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1528673 1 -   2331223 A
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                144837 1 -    281493 A
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       131995 1 -    134049 a
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        220309 1 -    227762 a
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_202118                     1490 1 -      3360 A
i Zapus_hudsonius.ZapHud_scaffold_202118                C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            2372 1 -     13665 A
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Petromus_typicus.PetTyp_scaffold_33007                    17492 0 -     36578 C
e Tragulus_javanicus.TraJav_scaffold_14717                   9488 743 +     90398 I
e Sus_scrofa.CM000824.4                                 189275422 0 + 218635234 C
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Choloepus_hoffmanni.KN194586.1                           764426 0 +    964067 C
e Choloepus_didactylus.ChoDid_scaffold_36182                19122 0 -     21363 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           21665 2 -    119109 I
e Tarsius_wallacei.k141_48636                               64696 0 +     65473 C
e Tarsius_lariang.k141_609102                               31387 0 +     42269 C
e Rhinopithecus_bieti.k119_554384                            2917 0 -     17045 C
e Pithecia_vanzolinii.k141_831006                           15424 0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514 0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521 0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292 0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093 0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038 0 +     78826 C
e Pithecia_albicans.k141_991845                             45662 0 -     61926 C
e Dolichotis_patagonum.DolPat_scaffold_14102                41004 2 -     73477 I
e Cuniculus_paca.CunPac_flattened_line_16637                21290 2 +     26546 I
e Cephalopachus_bancanus.k141_702587                        12545 0 +     21754 C
e Cavia_tschudii.CavTsc_scaffold_488                       180218 2 +    436027 I
e Cavia_porcellus.DS562889.1                             15802046 2 -  24440124 I
e Cavia_aperea.AVPZ01000278.1                            15790107 2 -  24422027 I
e Carlito_syrichta.NW_007248099.1                          313530 0 +    345090 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               17985 3 +    209709 TG-----G
s Acinonyx_jubatus.LLWD01000356.1                         2039933 3 +   3721120 tg-----a
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    118300 3 -    189883 GA-----A
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10663893 3 +  23371972 tg-----g
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7100419 3 -  16596857 TG-----G
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_141108                   1671 3 -      7259 TA-----A
i Allactaga_bullata.AllBul_scaffold_141108              C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   5859 3 -     60446 TG-----G
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         6576 3 -     29318 tg-----g
i Allochrocebus_lhoesti.k141_3566948                    I 31 I 8
s Allochrocebus_preussi.k141_1108977                         5514 3 +     38766 tg-----g
i Allochrocebus_preussi.k141_1108977                    C 0 I 8
s Allochrocebus_solatus.k141_371672                          6470 3 -     80423 tg-----g
i Allochrocebus_solatus.k141_371672                     I 31 I 8
s Alouatta_belzebul.k141_276091                              1454 3 +     19852 tg-----g
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                3698 3 -     12443 tg-----g
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                              997 3 +      5070 tg-----g
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                  742 3 -      1641 tt-----g
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          3481 3 -     24210 tg-----g
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           30063 3 -     30219 tg-----g
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_405616                              5899 3 +     16794 tg-----g
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                            1031 3 -      1470 tg-----g
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             5176 3 -      9835 tt-----g
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3525967 3 +   4113121 CA-----G
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      392986 3 -    631301 TA-----G
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             3400 2 +     55446 TA------
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 66786 3 +     78111 tg-----g
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            9734 3 +     22701 TG-----G
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5753690 3 +   9889416 tg-----g
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                            10289 3 -    104377 tg-----g
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                              10296 3 +     23246 tg-----g
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     2825 8 +     11424 TATCGTAA
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        6885 3 +      9265 tg-----g
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                11395 3 -     29036 TA-----G
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9543584 3 +  39197703 tg-----g
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             64858 3 +     85812 tg-----g
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                15871 3 +     89302 tg-----g
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             20372 3 -     58268 tg-----g
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             68366 3 +    119057 tg-----g
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              10335 3 -     25888 tg-----g
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                11397 3 -     16375 tg-----c
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               5013 3 +      6337 tg-----c
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26384443 3 +  51448160 tg-----g
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        9616 3 -     13118 tg-----g
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   48431 3 -     72089 TA-----G
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   302570 3 -   6870073 TA-----G
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22956668 3 + 161108492 TA-----G
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     418909 3 +    998990 TA-----G
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22665322 3 + 158972876 TA-----G
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               675259 3 +   1914593 TA-----G
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               118234 3 -    171031 tg-----g
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 17254 3 +    125063 tg-----g
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                19301 3 -    216513 tg-----g
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       11844 3 -    134917 tg-----g
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3223566 3 -   8989139 TG-----A
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           401267 3 -  15254737 TG-----A
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2977004 3 +   6889770 TG-----A
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11526758 3 +  39901454 TG-----G
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   21732 3 +     87036 TG-----G
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11273441 3 -  35597290 TG-----G
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11096152 3 +  39895921 TG-----G
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16462937 3 -  44759192 TG-----G
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21333911 3 + 157394656 CA-----G
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135712266 3 - 157403528 CA-----G
i Capra_hircus.CM004562.1                               C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               62409 3 +     67245 TA-----G
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_1326                      417 3 -    202837 TA-----G
i Castor_canadensis.CasCan_scaffold_1326                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   163077 3 -    276539 TG-----G
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15790109 2 -  24422027 -G-----A
i Cavia_aperea.AVPZ01000278.1                           I 2 I 2
s Cavia_porcellus.DS562889.1                             15802048 2 -  24440124 -G-----A
i Cavia_porcellus.DS562889.1                            I 2 I 2
s Cavia_tschudii.CavTsc_scaffold_488                       180220 2 +    436027 -G-----A
i Cavia_tschudii.CavTsc_scaffold_488                    I 2 I 2
s Cebus_albifrons.Contig22                               18895959 3 -  29618158 tg-----g
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                12609 3 -     26817 tg-----g
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                16853 3 +     25043 tg-----g
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4368012 3 +   7569818 TT-----G
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         7769 3 -      9338 TT-----G
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6559800 3 +   6739814 tg-----g
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      31277 3 +     60454 tg-----g
i Cercocebus_chrysogaster.k141_2328246                  I 31 C 0
s Cercocebus_lunulatus.k141_4634644                          6481 3 -     21101 tg-----g
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         63791 3 -    107033 tg-----g
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        6654 3 -     17608 tg-----g
i Cercopithecus_ascanius.k141_4123525                   I 31 I 8
s Cercopithecus_cephus.k141_3893260                          3819 3 +     45019 tg-----g
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           4095 3 +     15177 tg-----g
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          6701 3 +     16677 tg-----g
i Cercopithecus_hamlyni.k141_129805                     I 31 C 0
s Cercopithecus_lowei.k141_623764                           28891 3 +     35983 tg-----g
i Cercopithecus_lowei.k141_623764                       I 31 I 8
s Cercopithecus_albogularis.ctg51                              11995422 3 +  12117833 tg-----g
i Cercopithecus_albogularis.ctg51                             I 31 I 8
s Cercopithecus_mona.ctg12                               46482398 3 +  46592721 tg-----g
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                        515 3 -     27215 tg-----g
i Cercopithecus_neglectus.k141_2169300                  C 0 I 8
s Cercopithecus_nictitans.k141_1129315                       6715 3 +     35577 tg-----g
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        6509 3 -     25661 tg-----g
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_1631406                         700 3 +     11509 TG-----G
i Cercopithecus_pogonias.k141_1631406                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        26050 3 +     37128 tg-----g
i Cercopithecus_roloway.k141_2263608                    I 31 I 8
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           5007 3 -      6963 tg-----a
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           63606 3 -     68416 tg-----c
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                           12726 3 +     13308 tg-----c
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             9895 3 -     18223 TG-----G
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              1633 3 +    188999 TG-----G
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           45932 3 +     57117 TG-----G
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          50612 3 +     54541 TG-----G
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15964803 1 +  43084221 -------a
i Chinchilla_lanigera.JH721867.1                        C 0 I 2
s Chiropotes_israelita.k141_1189915                         75413 3 +    196370 tg-----g
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          19594 3 +     40510 tg-----g
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15144235 3 -  15256731 ta-----g
i Chlorocebus_aethiops.ctg22                            C 0 I 8
s Chlorocebus_pygerythrus.k141_596994                        4224 3 +     16635 TG-----A
i Chlorocebus_pygerythrus.k141_596994                   C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                         13528754 3 + 101219884 tg-----a
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                19122 3 -     21363 tg-----g
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           764426 3 +    964067 tg-----g
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_954668              1343 3 -      1738 TA-----G
i Chrysochloris_asiatica.ChrAsi_scaffold_954668         C 0 C 0
s Colobus_angolensis.KN983490.1                            283929 3 +    886210 tg-----a
i Colobus_angolensis.KN983490.1                         C 0 C 0
s Colobus_guereza.LG08                                   96946818 3 - 156195979 tg-----a
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_688201                               481 3 +      1908 tg-----a
i Colobus_polykomos.k141_688201                         I 1 n 3
s Condylura_cristata.JH655880.1                          60622566 3 +  78930452 TG-----G
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         2930 3 -      5782 TA-----G
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 283076 3 -    399297 GA-----A
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53035427 3 +  72327488 GA-----A
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              2522 3 -     22648 TG-----A
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            57912 3 -     70449 ta-----g
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  214691 3 -    956709 TA-----G
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 36352 3 -     67205 AA-----A
i Ctenomys_sociabilis.CteSoc_scaffold_19489             I 1581 I 2
s Cuniculus_paca.CunPac_flattened_line_16637                21292 2 +     26546 -A-----A
i Cuniculus_paca.CunPac_flattened_line_16637            I 2 I 2
s Dasyprocta_punctata.DasPun_flattened_line_634             62431 3 -    236241 AA-----A
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 I 2
s Dasypus_novemcinctus.JH568778.1                          186067 3 -   6883506 tg-----a
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16849558 3 +  31942871 tg-----t
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80041046 3 -  96802777 tg-----g
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18701621 3 -  18957592 TA-----G
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 326668 3 +    993696 TT-----G
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   7300 3 +    151128 TT-----G
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   160057 1 +    228994 -------A
i Dinomys_branickii.DinBra_scaffold_1996                C 0 I 1
s Dipodomys_ordii.KN672545.1                              3660727 3 +   4240102 TA-----G
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  3081 3 -     11986 TA-----G
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                41006 2 -     73477 -G-----A
i Dolichotis_patagonum.DolPat_scaffold_14102            I 2 I 2
s Echinops_telfairi.JH980316.1                           23000334 3 -  44670279 ta-----a
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1496647 3 +   1727528 TA-----G
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7834588 3 +  15467074 ta-----a
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        244241 3 -    369425 ga-----a
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01076532.1                            572 3 +      9159 ga-----a
i Ellobius_talpinus.LOJH01076532.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85877882 3 +  99434291 tg-----g
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4709373 3 +   6522550 TG-----G
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5856760 3 -   7175178 tt-----g
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13355246 3 +  41866177 tt-----g
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          16736 3 +     92910 tt-----g
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11541688 3 +  16010500 TG-----A
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48781268 3 -  48907691 tg-----g
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          319286 3 +    330699 TG-----G
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             65743 3 +     89355 TG-----G
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              9706 3 +     13586 TG-----C
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_1015201                              2965 3 -      4292 TG-----C
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            16102 3 +     36558 TG-----C
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            12424 3 +     60246 tg-----c
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                15909 3 +    109717 tg-----c
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 3892 3 -     19505 TG-----C
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                20567 3 +     27497 TG-----C
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           23023 3 +     26808 TG-----C
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                37755 3 +     46535 TG-----C
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              20496 3 -     29447 TG-----C
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129899353 3 - 159252932 tg-----a
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129286328 3 - 158578461 tg-----a
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 27427 3 +     52776 tg-----a
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13896578 3 -  19261668 aa-----t
i Fukomys_damarensis.KN123630.1                         C 0 I 2
s Galago_moholi.ctg555                                     215732 3 -    847004 tg-----g
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           18093 3 -     43889 tg-----g
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          15237 3 +     27357 tg-----g
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               160005 3 +    324696 ta-----a
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    186424 3 -    189561 TG-----G
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           16903 3 -     18683 GA-----G
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               9684 3 -     14630 TG-----G
i Gorilla_beringei.k141_111300                          I 127 C 0
s Gorilla_gorilla.LT578340.1                             52344766 3 + 195582420 tg-----a
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   80218 3 +    118900 ga-----g
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         6495 3 +     10286 tg-----c
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             4973 3 -     11661 tg-----c
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                            10300 3 +     56096 tg-----t
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        33549 3 -     42470 tg-----c
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        50172 3 -     54384 tg-----c
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              23050 3 +     53719 ta-----g
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                33316 3 -     91191 CA-----G
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2561070 3 +  31725842 aa-----t
i Heterocephalus_glaber.JH602058.1                      C 0 I 2
s Heterohyrax_brucei.HetBruBak_scaffold_25354               63296 3 +     73687 tg-----a
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              151076 3 +    277961 TG-----G
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      283465 3 -    477199 TG-----G
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_7653                6015 3 +     86108 TG-----G
i Hipposideros_galeritus.HipGal_scaffold_7653           C 0 C 0
s Hoolock_leuconedys.ctg83                                  28460118 5 -  32676794 TG--G-AA
i Hoolock_leuconedys.ctg83                                 C 0 n 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 23523 3 -     67322 TG-----G
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           21667 2 -    119109 -A-----A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       I 2 I 2
s Hylobates_abbotti.k141_1816750                             2170 3 +      3202 TG-----G
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1136966                               179 3 +      9785 TG-----G
i Hylobates_agilis.k141_1136966                         C 0 C 0
s Hylobates_klossii.k141_468230                              3659 3 +      5464 TG-----G
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14629005 3 -  25970782 TG-----G
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            1557 3 +      4161 TG-----G
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             37113 3 -     60944 TG-----G
i Hylobates_pileatus_a.tarseq_592                         T 754 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     9975 3 +     22540 TA-----T
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7130804 3 +  13083262 ta-----a
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   2014 3 +      3484 tg-----c
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              13274 3 +     17520 TG-----A
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8579410 3 +  11848649 ta-----a
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               27893 3 +     37189 TG-----G
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          54453 3 -    147782 TG-----G
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    5968 3 +     26176 TG-----G
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258411847 3 - 285822530 tg-----c
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        29156 3 +     39228 TG-----C
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            58520 3 +     63517 TG-----C
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        36900 3 -     38897 TG-----C
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      2946 3 -     13103 TG-----C
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3091855 3 -   3498232 cc-----a
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    21298 3 +     22452 TA-----G
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            140208 3 +   3060487 tg-----g
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19252889 3 +  19376315 tg-----g
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           15695 3 +     84689 tg-----g
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3783433 3 +   6799190 tg-----g
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20599217 3 -  62548349 tg-----a
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11095608 3 +  39895028 TG-----G
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             24640 3 +     74745 TG-----G
i Macaca_arctoides.k141_2201161                         I 31 C 0
s Macaca_assamensis.Contig65                             12711101 3 +  12821369 TG-----G
i Macaca_assamensis.Contig65                            I 31 C 0
s Macaca_cyclopis.k119_883699                                3674 3 -     26467 TG-----G
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           51545 3 +     63263 TG-----G
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 3655 3 -     26361 TG-----G
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 6845 3 -      7381 TG-----G
i Macaca_leonina.k141_467472                            I 31 C 0
s Macaca_maura.k141_188832                                   5353 3 -     30208 CG-----A
i Macaca_maura.k141_188832                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196040172 3 + 196197964 TG-----G
i Macaca_mulatta.NC_041755.1                            N 0 C 0
s Macaca_nemestrina.KQ004885.1                           11450342 3 +  11645122 TG-----G
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_2105412                                  4881 3 -     16799 CG-----A
i Macaca_nigra.k141_2105412                             C 0 C 0
s Macaca_radiata.k141_3680256                                6691 3 -     13212 TG-----G
i Macaca_radiata.k141_3680256                           I 31 C 0
s Macaca_siberu.k141_741907                                 20371 3 -     55006 TG-----G
i Macaca_siberu.k141_741907                             I 31 C 0
s Macaca_silenus.Contig12                                43845486 3 +  43892939 TG-----G
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               21655 3 -     24607 TG-----G
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_476106                                3943 3 -     15846 CG-----A
i Macaca_tonkeana.k141_476106                           C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43442061 3 -  43563597 tg-----g
i Mandrillus_leucophaeus.scaffold125                    I 31 C 0
s Mandrillus_sphinx.Contig144                             4454865 3 -   4543643 tg-----g
i Mandrillus_sphinx.Contig144                           I 31 C 0
s Manis_javanica.JSZB01003966.1                            152580 3 +    252755 TT-----G
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             40174 3 +     58827 TT-----G
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36878671 3 +  64221397 ta-----a
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       66015 3 -    234502 TG-----G
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             6985 3 -     87323 TG-----G
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 1698 3 +    115071 AA-----A
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1051949 3 -  26018355 ga-----a
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    2865 3 -     12939 TG-----G
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16514876 3 +  47401472 tg-----c
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  41902 3 -     48017 ta-----a
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               25368 3 -     32043 AG-----G
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22825038 3 -  98408828 ga-----a
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8213421 3 +  10048721 TG-----G
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            37912 3 +     45743 TG-----G
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_1528120                         2710 5 -     56045 TG--G-AA
i Miopithecus_ogouensis.k141_1528120                    n 3 n 3
s Mirounga_angustirostris.MirAng_flattened_line_8852        17351 3 -    104932 cg-----a
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     5560 3 -     12809 tg-----c
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 150639 3 +    154973 tg-----g
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                163899 3 +    265003 TG-----G
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  6665 3 -     19904 TA-----G
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  150727 3 -    168139 ta-----g
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          24829 3 -    100666 TG-----G
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70772267 3 +  92629107 gg-----a
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75494321 3 +  98207768 gg-----a
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67561073 3 +  89017189 aa-----a
i Mus_pahari.LT608305.1                                 C 0 I 2
s Mus_spretus.CM004110.1                                 74337047 3 +  97876770 gg-----a
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             15307 3 +     98495 ga-----g
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4429091 3 -  28371801 tg-----g
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     96068 3 -    117718 GA-----A
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 1795 I 2
s Myotis_brandtii.KE161952.1                               971708 2 +   8389877 GG------
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5023128 3 +   6462685 tg-----g
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3469212 3 -   3747815 TG-----A
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        14453 3 +     66751 tg-----g
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             8097 3 -      8794 TG-----G
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            241050 3 -    362372 ta-----t
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_1382660                              4263 3 +      5784 tg-----a
i Nasalis_larvatus.k141_1382660                         C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4490749 3 -  14209539 cg-----a
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3955230 3 -   4490290 tg-----g
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  50967 3 +     94413 TG-----A
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_762468                             676 3 -      2755 tg-----g
i Nomascus_annamensis.k141_762468                       C 0 C 0
s Nomascus_concolor.k141_256540                              7288 3 -      8966 tg-----g
i Nomascus_concolor.k141_256540                         I 75 C 0
s Nomascus_gabriellae.k141_1400361                           1227 3 -      2203 tg-----g
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_453                             6539 3 +     12787 tg-----g
i Nomascus_siki_b.tarseq_453                        I 75 C 0
s Nomascus_siki_a.k141_421408                                  1141 3 +     16235 tg-----g
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                38473 3 +   3668941 TG-----G
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65572358 3 -  95554990 tg-----g
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_771591                            15768 3 +     16181 TG-----G
i Nycticebus_coucang.k141_771591                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65680546 3 +  89412551 tg-----g
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            5000343 3 -  23139505 ta-----a
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3691408 3 +  10294119 aa-----a
i Octodon_degus.JH651621.1                              I 1647 I 2
s Odobenus_rosmarus.KB229369.1                             685453 3 -   3126709 ca-----a
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1084095 3 +   1425656 TA-----G
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         42165 3 +     78940 TG-----G
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  130838 3 +    145789 GA-----A
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  43531 3 +     62360 AA-----A
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7228904 3 -   7562323 tg-----g
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              64626 3 -     66828 ta-----g
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141884315 3 + 163896628 ta-----g
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      315611 3 -    505867 TG-----G
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        5594 3 -     53940 tg-----a
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18013563 3 -  38779656 Tg-----g
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134083102 3 - 275406953 CA-----G
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      84336 3 +    140051 CA-----G
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.KQ411703.1                                   19498 3 +     41252 tg-----g
i Pan_paniscus.KQ411703.1                               n 0 I 1
s Pan_troglodytes.KZ622857.1                               333889 3 +    772158 tg-----g
i Pan_troglodytes.KZ622857.1                            I 436 I 53
s Panthera_onca.PanOnc_flattened_line_1615                  40347 3 +    295523 TG-----A
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3644162 3 +  18214204 tg-----a
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5033810 3 -   6340057 tg-----a
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1071973 3 -   1292953 CA-----G
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188160850 3 - 188283584 tg-----g
i Papio_anubis.CM001492.2                               N 0 C 0
s Papio_cynocephalus.k141_45376                              3940 3 +     25005 tg-----g
i Papio_cynocephalus.k141_45376                         I 31 C 0
s Papio_hamadryas.Contig15                               47518222 3 +  47705337 tg-----g
i Papio_hamadryas.Contig15                              I 31 C 0
s Papio_kindae.k141_5458022                                 72213 3 -    104429 tg-----g
i Papio_kindae.k141_5458022                             I 31 C 0
s Papio_papio.k141_979496                                   10745 3 +     14967 tg-----g
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 6610 3 -      7628 tg-----g
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    121829 3 -    135482 TG-----G
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          11258 3 -     23713 tg-----g
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           12409 3 +     61070 tg-----g
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       2705 3 +     49596 TA-----T
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4955895 3 -   8017169 ga-----a
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              3371 3 +      8220 TG-----G
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Piliocolobus_badius.k141_512007                           29788 3 +     37672 tg-----a
i Piliocolobus_badius.k141_512007                       C 0 C 0
s Piliocolobus_gordonorum.k141_736355                       29705 3 +     67079 tg-----a
i Piliocolobus_gordonorum.k141_736355                   C 0 C 0
s Piliocolobus_kirkii.k141_451083                            4869 3 -     13367 TG-----A
i Piliocolobus_kirkii.k141_451083                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000342.1                3428470 3 -   4356645 tg-----a
i Piliocolobus_tephrosceles.PDMG02000342.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            99989 3 +    112873 TG-----G
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           9849 3 +     21690 TG-----G
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       26544 3 +     44506 TG-----G
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        26757 3 +     67491 TG-----G
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      16996 3 -     98129 TG-----G
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     26597 3 +    147771 TG-----G
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         3232 3 -     43940 TG-----G
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          7315 3 -     55515 TG-----G
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         26669 3 +    152463 TG-----G
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       4477 3 -    119457 TG-----G
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         16391 3 +    134592 TG-----G
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          26979 3 -     75465 TG-----G
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              191594 3 -    373494 tg-----g
i Pongo_abelii.NDHI03003816.1                           I 75 C 0
s Pongo_pygmaeus.ctg62                                   19812241 3 +  19899266 tg-----g
i Pongo_pygmaeus.ctg62                                  I 75 C 0
s Presbytis_comata.k141_678168                              10995 3 +     11126 TG-----A
i Presbytis_comata.k141_678168                          C 0 C 0
s Presbytis_mitrata.k141_1767317                            10984 3 +     15869 TG-----A
i Presbytis_mitrata.k141_1767317                        C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                4402 3 -      9567 TG-----A
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6853221 3 +  12164890 TG-----c
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     22028 3 -     30946 NN-----N
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         8305 3 +     11805 TG-----C
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           47639 3 +     52369 TA-----C
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         40026 3 -     44753 tg-----c
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            21949 3 +     27322 TA-----C
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       21598 3 -     53241 TG-----C
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         43861 3 -     48185 TG-----C
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           38686 3 +     77221 aa-----a
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            6549 3 -     27784 CG-----G
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        250738 3 -    344369 TG-----G
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Puma_concolor.QAVW01000427.1                          131540459 3 - 161321710 tg-----a
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_951151                              3021 3 -      8225 tg-----a
i Pygathrix_cinerea.k141_951151                         C 0 C 0
s Pygathrix_nigripes_b.ctg25                                14340857 3 -  15297009 tg-----a
i Pygathrix_nigripes_b.ctg25                               C 0 C 0
s Pygathrix_nigripes_a.k141_758202                             3038 3 -      8240 tg-----a
i Pygathrix_nigripes_a.k141_758202                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                20960 3 +     68503 TA-----G
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13918106 3 +  90463843 ga-----a
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1793044 3 +   2252614 CC-----A
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   152255320 3 - 206558726 tg-----a
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg241                            462128 3 +   1472273 tg-----a
i Rhinopithecus_strykeri.ctg241                         C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                      1371 3 -      4338 TA-----G
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15677001 3 -  43202129 TG-----G
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        8914 3 +     34089 TG-----G
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              8854 3 -     60842 TG-----G
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              8948 3 +     67014 TG-----G
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              8925 3 +     60816 TG-----G
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 8862 3 -     76454 TG-----G
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17345647 3 -  30362882 tg-----g
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         24968 3 -     62485 tg-----g
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   40039 3 -    114521 TG-----G
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1743075                       45566 3 +     45790 TG-----A
i Semnopithecus_entellus.k141_1743075                   C 0 C 0
s Semnopithecus_hypoleucos.k141_2141024                      1339 3 -      8815 TG-----A
i Semnopithecus_hypoleucos.k141_2141024                 C 0 C 0
s Semnopithecus_johnii.k141_1300894                          1356 3 +     13764 TG-----A
i Semnopithecus_johnii.k141_1300894                     C 0 C 0
s Semnopithecus_priam.k141_368201                           10095 3 -     20692 TG-----A
i Semnopithecus_priam.k141_368201                       C 0 C 0
s Semnopithecus_schistaceus.k141_628310                     45640 3 -     53123 TG-----A
i Semnopithecus_schistaceus.k141_628310                 C 0 C 0
s Semnopithecus_vetulus.k141_748269                          4694 3 +     17284 TG-----A
i Semnopithecus_vetulus.k141_748269                     C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  105893 3 -    120886 GA-----A
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            23995 3 +    739146 TG-----G
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17774216 3 -  27805282 TG-----G
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2244505 3 +   2842873 ta-----a
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             239528 3 -    276980 tg-----t
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            33642 3 +     62062 ta-----g
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        19264 3 -  13920577 TG-----G
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                2777 3 +     20549 tg-----g
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               17770 3 +     45698 TG-----G
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      811246 3 +   1148477 TT-----G
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  61888 3 +     99546 TT-----G
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194012383 3 - 194193292 tg-----g
i Theropithecus_gelada.CM009951.1                       N 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                   847 3 -      3104 tg-----a
i Tolypeutes_matacus.TolMat_scaffold_475685             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  138545 3 -    259118 TA-----G
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_672638                         4939 3 +     38635 TG-----A
i Trachypithecus_auratus.k141_672638                    C 0 I 3
s Trachypithecus_crepusculus.k141_863597                     4932 3 -     23436 TG-----A
i Trachypithecus_crepusculus.k141_863597                C 0 C 0
s Trachypithecus_cristatus.k141_968903                      32581 3 +     43409 TG-----A
i Trachypithecus_cristatus.k141_968903                  C 0 I 3
s Trachypithecus_francoisi.k141_1012484                       865 3 +      8809 TG-----A
i Trachypithecus_francoisi.k141_1012484                 C 0 C 0
s Trachypithecus_geei.k141_137495                           30094 3 -     42322 tg-----a
i Trachypithecus_geei.k141_137495                       C 0 C 0
s Trachypithecus_germaini.k141_240878                        5059 3 -     24955 TG-----A
i Trachypithecus_germaini.k141_240878                   C 0 I 3
s Trachypithecus_hatinhensis.k141_641377                     1230 3 +      1365 TG-----A
i Trachypithecus_hatinhensis.k141_641377                C 0 C 0
s Trachypithecus_laotum.k141_897381                         45634 3 -     53586 TG-----A
i Trachypithecus_laotum.k141_897381                     C 0 C 0
s Trachypithecus_leucocephalus.k141_352489                   1205 3 +      9423 TG-----A
i Trachypithecus_leucocephalus.k141_352489              C 0 C 0
s Trachypithecus_melamera.k141_950981                        2220 3 -      3512 TG-----A
i Trachypithecus_melamera.k141_950981                   C 0 C 0
s Trachypithecus_obscurus.k141_588024                        4944 3 +      4963 TG-----A
i Trachypithecus_obscurus.k141_588024                   C 0 n 0
s Trachypithecus_phayrei.ctg364                            232443 3 -   1198723 tg-----a
i Trachypithecus_phayrei.ctg364                         C 0 C 0
s Trachypithecus_pileatus.k141_532233                       30114 3 -     40754 tg-----a
i Trachypithecus_pileatus.k141_532233                   C 0 C 0
s Trichechus_manatus.JH594618.1                          16090292 3 +  31416278 tg-----a
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2801572 3 -   3938065 CT-----G
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                   10395 3 +     13056 CT-----G
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69317634 3 -  96451834 tg-----g
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                     495 3 +    136657 TG-----G
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 C 0
s Ursus_maritimus.KK498671.1                              6521161 3 +  28682327 tg-----g
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  9863 3 -     20643 tg-----c
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             29398 3 -     33872 tg-----t
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1528674 3 -   2331223 TG-----A
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                144838 3 -    281493 TG-----G
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       131996 3 -    134049 ta-----a
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        220310 3 -    227762 ca-----a
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_202118                     1491 3 -      3360 TT-----G
i Zapus_hudsonius.ZapHud_scaffold_202118                C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            2373 3 -     13665 TG-----G
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Petromus_typicus.PetTyp_scaffold_33007                    17492 0 -     36578 C
e Tragulus_javanicus.TraJav_scaffold_14717                   9488 743 +     90398 I
e Sus_scrofa.CM000824.4                                 189275422 0 + 218635234 C
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Tarsius_wallacei.k141_48636                               64696 0 +     65473 C
e Tarsius_lariang.k141_609102                               31387 0 +     42269 C
e Rhinopithecus_bieti.k119_554384                            2917 0 -     17045 C
e Pithecia_vanzolinii.k141_831006                           15424 0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514 0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521 0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292 0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093 0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038 0 +     78826 C
e Pithecia_albicans.k141_991845                             45662 0 -     61926 C
e Cephalopachus_bancanus.k141_702587                        12545 0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530 0 +    345090 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               17988 1 +    209709 A
s Gorilla_beringei.k141_111300                               9687 1 -     14630 A
i Gorilla_beringei.k141_111300                          C 0 I 7
s Gorilla_gorilla.LT578340.1                            119656787 1 - 195582420 a
i Gorilla_gorilla.LT578340.1                            I 130 I 7
s Pan_paniscus.CM003386.1                               127578966 1 - 205426864 a
i Pan_paniscus.CM003386.1                               I 78 I 7
s Pan_troglodytes.CM009241.2                            120156126 1 - 196562556 a
i Pan_troglodytes.CM009241.2                            I 78 I 7
e Eptesicus_fuscus.JH977687.1                             4709376 0 +   6522550 C
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Petromus_typicus.PetTyp_scaffold_33007                    17492 0 -     36578 C
e Sorex_araneus.JH798170.1                               17774219 0 -  27805282 C
e Dinomys_branickii.DinBra_scaffold_1996                   160058 1 +    228994 I
e Erinaceus_europaeus.JH835290.1                         11541691 0 +  16010500 C
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           5010 0 -      6963 C
e Aplodontia_rufa.AprRuf_scaffold_101456                     2833 0 +     11424 C
e Oryctolagus_cuniculus.CM000803.1                      141884318 0 + 163896628 C
e Ochotona_princeps.JH802095.1                            5000346 0 -  23139505 C
e Lepus_americanus.LepAme_scaffold_62849                    21301 0 +     22452 C
e Perognathus_longimembris.PerPac_flattened_line_19359       2708 0 +     49596 C
e Dipodomys_stephensi.DipSte_scaffold_84338                  3084 0 -     11986 C
e Dipodomys_ordii.KN672545.1                              3660730 0 +   4240102 C
e Suricata_suricatta.SurSur_flattened_line_20339            33645 0 +     62062 C
e Nomascus_siki_a.k141_421408                                  1144 0 +     16235 C
e Chrysochloris_asiatica.ChrAsi_scaffold_954668              1346 0 -      1738 C
e Ziphius_cavirostris.ZipCav_flattened_line_60625            2376 0 -     13665 C
e Zalophus_californianus.ZalCal_flattened_line_4097        220313 0 -    227762 C
e Vulpes_lagopus.VulLag_flattened_line_2045                144841 0 -    281493 C
e Vicugna_pacos.KN269600.1                                1528677 0 -   2331223 C
e Ursus_maritimus.KK498671.1                              6521164 0 +  28682327 C
e Uropsilus_gracilis.UroGra_scaffold_4115                     498 0 +    136657 C
e Tursiops_truncatus.MRVK01000923.1                      69317637 0 -  96451834 C
e Trichechus_manatus.JH594618.1                          16090295 0 +  31416278 C
e Tragulus_javanicus.TraJav_scaffold_14717                   9488 743 +     90398 I
e Tonatia_saurophila.TonSau_scaffold_3334                  138548 0 -    259118 C
e Tolypeutes_matacus.TolMat_scaffold_475685                   850 0 -      3104 C
e Tapirus_terrestris.TapTer_scaffold_14939                  61891 0 +     99546 C
e Tapirus_indicus.TapInd_scaffold_176                      811249 0 +   1148477 C
e Tamandua_tetradactyla.TamTet_scaffold_26877               17773 0 +     45698 C
e Tadarida_brasiliensis.TadBra_scaffold_61492                2780 0 +     20549 C
e Sus_scrofa.CM000824.4                                 189275422 0 + 218635234 C
e Spilogale_gracilis.SpiGra_flattened_line_905             239531 0 -    276980 C
e Solenodon_paradoxus.SolPar_flattened_line_1012            23998 0 +    739146 C
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   40042 0 -    114521 C
e Saiga_tatarica.SaiTat_scaffold_371890                      1374 0 -      4338 C
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Rhinolophus_sinicus.LVEH01000179.1                      1793047 0 +   2252614 C
e Rangifer_tarandus.RanTarSib_scaffold_24239                20963 0 +     68503 C
e Puma_concolor.QAVW01000427.1                          131540462 0 - 161321710 C
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Pteronura_brasiliensis.PteBra_flattened_line_1343        250741 0 -    344369 C
e Pteronotus_parnellii.KE867983.1                            6552 0 -     27784 C
e Procavia_capensis.ProCapCap_scaffold_149274                4405 0 -      9567 C
e Platanista_gangetica.PlaMin_flattened_line_72990           9852 0 +     21690 C
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            99992 0 +    112873 C
e Phocoena_phocoena.PhoPho_flattened_line_53071              3374 0 +      8220 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    121832 0 -    135482 C
e Pantholops_hodgsonii.KE114631.1                         1071976 0 -   1292953 C
e Panthera_tigris.KE721879.1                              5033813 0 -   6340057 C
e Panthera_pardus.KV860323.1                              3644165 0 +  18214204 C
e Panthera_onca.PanOnc_flattened_line_1615                  40350 0 +    295523 C
e Ovis_canadensis.OviCan_scaffold_6251                      84339 0 +    140051 C
e Ovis_aries.CM001582.2                                 134083105 0 - 275406953 C
e Otocyon_megalotis.JAEUCK010005121.1                      315614 0 -    505867 C
e Orycteropus_afer.OryAfe_flattened_line_13509              64629 0 -     66828 C
e Orcinus_orca.KB316965.1                                 7228907 0 -   7562323 C
e Okapia_johnstoni.LVCL01S0017931.1                         42168 0 +     78940 C
e Odocoileus_virginianus.KZ101650.1                       1084098 0 +   1425656 C
e Odobenus_rosmarus.KB229369.1                             685456 0 -   3126709 C
e Nyctereutes_procyonoides.CAJHUB010000786.1                38476 0 +   3668941 C
e Noctilio_leporinus.NocLep_scaffold_12062                  50970 0 +     94413 C
e Neophocaena_asiaeorientalis.KZ688543.1                  3955233 0 -   4490290 C
e Neomonachus_schauinslandi.NINY01007774.1                4490752 0 -  14209539 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             8100 0 -      8794 C
e Myotis_myotis.MyoMyo_scaffold_6123                        14456 0 +     66751 C
e Myotis_lucifugus.GL429887.1                             3469215 0 -   3747815 C
e Myotis_davidii.KB114863.1                               5023131 0 +   6462685 C
e Myotis_brandtii.KE161952.1                               971710 0 +   8389877 C
e Mustela_putorius.JH417978.1                             4429094 0 -  28371801 C
e Murina_feae.MurFea_scaffold_2254                          24832 0 -    100666 C
e Mungos_mungo.MunMun_flattened_line_8729                  150730 0 -    168139 C
e Moschus_moschiferus.MosMos_scaffold_78805                  6668 0 -     19904 C
e Mormoops_blainvillei.MorMeg_scaffold_2952                163902 0 +    265003 C
e Monodon_monoceros.MonMon_M_scaffold_5598                 150642 0 +    154973 C
e Mirounga_angustirostris.MirAng_flattened_line_8852        17354 0 -    104932 C
e Miniopterus_schreibersii.MinSch_scaffold_24116            37915 0 +     45743 C
e Miniopterus_natalensis.LDJU01000022.1                   8213424 0 +  10048721 C
e Micronycteris_hirsuta.MicHir_scaffold_37978               25371 0 -     32043 C
e Microgale_talazaci.MicTal_scaffold_34660                  41905 0 -     48017 C
e Mesoplodon_bidens.MesBid_scaffold_96348                    2868 0 -     12939 C
e Mellivora_capensis.MelCap_flattened_line_15433             6988 0 -     87323 C
e Megaderma_lyra.MegLyr_scaffold_3562                       66018 0 -    234502 C
e Manis_pentadactyla.KN017078.1                             40177 0 +     58827 C
e Manis_javanica.JSZB01003966.1                            152583 0 +    252755 C
e Lycaon_pictus.CM007556.1                               11095611 0 +  39895028 C
e Loxodonta_africana.GL010040.1                          20599220 0 -  62548349 C
e Lipotes_vexillifer.KE558548.1                            140211 0 +   3060487 C
e Leptonychotes_weddellii.KB714749.1                      3091858 0 -   3498232 C
e Lasiurus_borealis.LasBor_scaffold_59542                    5971 0 +     26176 C
e Kogia_breviceps.KogBre_flattened_line_35920               27896 0 +     37189 C
e Inia_geoffrensis.IniGeo_flattened_line_66725              13277 0 +     17520 C
e Hyaena_hyaena.HyaHya_flattened_line_20729                 23526 0 -     67322 C
e Hipposideros_galeritus.HipGal_scaffold_7653                6018 0 +     86108 C
e Hipposideros_armiger.JXIK01001085.1                      283468 0 -    477199 C
e Hippopotamus_amphibius.HipAmp_scaffold_1308              151079 0 +    277961 C
e Heterohyrax_brucei.HetBruBak_scaffold_25354               63299 0 +     73687 C
e Hemitragus_hylocrius.HemHyl_scaffold_16669                33319 0 -     91191 C
e Helogale_parvula.HelPar_flattened_line_22962              23053 0 +     53719 C
e Giraffa_tippelskirchi.LVKQ01S012154.1                    186427 0 -    189561 C
e Felis_nigripes.FelNig_flattened_line_8080                 27430 0 +     52776 C
e Felis_catus_fca126.CM031420.1                         129286331 0 - 158578461 C
e Eubalaena_japonica.EubJap_flattened_line_7756             65746 0 +     89355 C
e Eschrichtius_robustus.EscRob_flattened_line_685          319289 0 +    330699 C
e Equus_przewalskii.ATBW01073585.1                          16739 0 +     92910 C
e Equus_caballus.CM000402.2                              13355249 0 +  41866177 C
e Equus_asinus.JREZ01000062.1                             5856763 0 -   7175178 C
e Enhydra_lutris.KZ291749.1                              85877885 0 +  99434291 C
e Elephantulus_edwardii.JH947210.1                        7834591 0 +  15467074 C
e Elaphurus_davidianus.JRFZ01086400.1                     1496650 0 +   1727528 C
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Echinops_telfairi.JH980316.1                           23000337 0 -  44670279 C
e Diceros_bicornis.DicBicMic_scaffold_9545                   7303 0 +    151128 C
e Dicerorhinus_sumatrensis.PEKH010003161.1                 326671 0 +    993696 C
e Desmodus_rotundus.KZ672188.1                           18701624 0 -  18957592 C
e Delphinapterus_leucas.KZ290064.1                       80041049 0 -  96802777 C
e Dasypus_novemcinctus.JH568778.1                          186070 0 -   6883506 C
e Cryptoprocta_ferox.CryFer_flattened_line_19014            57915 0 -     70449 C
e Crocidura_indochinensis.CroInd_scaffold_27484              2525 0 -     22648 C
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         2933 0 -      5782 C
e Condylura_cristata.JH655880.1                          60622569 0 +  78930452 C
e Choloepus_hoffmanni.KN194586.1                           764429 0 +    964067 C
e Choloepus_didactylus.ChoDid_scaffold_36182                19125 0 -     21363 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_160623         7772 0 -      9338 C
e Catagonus_wagneri.CatWag_scaffold_1305                   163080 0 -    276539 C
e Carollia_perspicillata.CarPer_scaffold_4436               62412 0 +     67245 C
e Capra_hircus.CM004562.1                               135712269 0 - 157403528 C
e Capra_aegagrus.CM003214.1                              21333914 0 + 157394656 C
e Canis_lupus_orion.HG994411.1                           16462940 0 -  44759192 C
e Canis_lupus_familiaris.chr31                           11096155 0 +  39895921 C
e Canis_lupus_dingo.QKWQ01001993.1                       11273444 0 -  35597290 C
e Canis_lupus_VD.CanFam_VD_scaffold_16982                   21735 0 +     87036 C
e CanFam4.chr31                                          11526761 0 +  39901454 C
e Camelus_ferus.KB016973.1                                2977007 0 +   6889770 C
e Camelus_dromedarius.KN271192.1                           401270 0 -  15254737 C
e Camelus_bactrianus.KN276303.1                           3223569 0 -   8989139 C
e Bubalus_bubalis.KI419065.1                               675262 0 +   1914593 C
e Bos_taurus.CM000177.6                                  22665325 0 + 158972876 C
e Bos_mutus.JH883513.1                                     418912 0 +    998990 C
e Bos_indicus.CM003021.1                                 22956671 0 + 161108492 C
e Bison_bison.KN264915.1                                   302573 0 -   6870073 C
e Beatragus_hunteri.BeaHun_scaffold_21644                   48434 0 -     72089 C
e Balaenoptera_bonaerensis.DF502048.1                        9619 0 -     13118 C
e Balaenoptera_acutorostrata.KI537095.1                  26384446 0 +  51448160 C
e Artibeus_jamaicensis.ArtJam_scaffold_41619                11398 0 -     29036 C
e Antilocapra_americana.AntAmePen_scaffold_27338             3402 0 +     55446 C
e Anoura_caudifer.AnoCau_scaffold_422                      392989 0 -    631301 C
e Ammotragus_lervia.NIVO01013474.1                        3525970 0 +   4113121 C
e Ailurus_fulgens.LNAC01000003.1                          7100422 0 -  16596857 C
e Ailuropoda_melanoleuca.LNAT01000321.1                  10663896 0 +  23371972 C
e Acinonyx_jubatus.LLWD01000356.1                         2039936 0 +   3721120 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           21669 2 -    119109 I
e Glis_glis.GliGli_scaffold_79770                           16906 0 -     18683 C
e Zapus_hudsonius.ZapHud_scaffold_202118                     1494 0 -      3360 C
e Jaculus_jaculus.JH725517.1                              8579413 0 +  11848649 C
e Hylobates_pileatus_a.tarseq_592                             37116 0 -     60944 C
e Hylobates_pileatus_b.ContigUN                                 14629008 0 -  25970782 C
e Allactaga_bullata.AllBul_scaffold_141108                   1674 0 -      7259 C
e Hylobates_muelleri.k141_1139146                            1560 0 +      4161 C
e Hylobates_klossii.k141_468230                              3662 0 +      5464 C
e Hylobates_agilis.k141_1136966                               182 0 +      9785 C
e Hylobates_abbotti.k141_1816750                             2173 0 +      3202 C
e Galeopterus_variegatus.GalVar_scaffold_354               160008 0 +    324696 C
e Microtus_ochrogaster.CM001673.1                        22825041 0 -  98408828 C
e Xerus_inauris.XerIna_scaffold_7898                       131999 0 -    134049 C
e Varecia_variegata.k141_775891                             29401 0 -     33872 C
e Varecia_rubra.k141_432109                                  9866 0 -     20643 C
e Tupaia_tana.TupTan_flattened_line_68454                   10398 0 +     13056 C
e Tupaia_chinensis.KB320831.1                             2801575 0 -   3938065 C
e Trachypithecus_pileatus.k141_532233                       30117 0 -     40754 C
e Trachypithecus_phayrei.ctg364                            232446 0 -   1198723 C
e Trachypithecus_obscurus.k141_588024                        4947 0 +      4963 I
e Trachypithecus_melamera.k141_950981                        2223 0 -      3512 C
e Trachypithecus_leucocephalus.k141_352489                   1208 0 +      9423 C
e Trachypithecus_laotum.k141_897381                         45637 0 -     53586 C
e Trachypithecus_hatinhensis.k141_641377                     1233 0 +      1365 C
e Trachypithecus_germaini.k141_240878                        5062 3 -     24955 I
e Trachypithecus_geei.k141_137495                           30097 0 -     42322 C
e Trachypithecus_francoisi.k141_1012484                       868 0 +      8809 C
e Trachypithecus_cristatus.k141_968903                      32584 3 +     43409 I
e Trachypithecus_crepusculus.k141_863597                     4935 0 -     23436 C
e Trachypithecus_auratus.k141_672638                         4942 3 +     38635 I
e Theropithecus_gelada.CM009951.1                       194012386 0 - 194193292 C
e Tarsius_wallacei.k141_48636                               64696 0 +     65473 C
e Tarsius_lariang.k141_609102                               31387 0 +     42269 C
e Spermophilus_dauricus.KZ294190.1                        2244508 0 +   2842873 C
e Sigmodon_hispidus.SigHis_scaffold_11332                  105896 0 -    120886 C
e Semnopithecus_vetulus.k141_748269                          4697 0 +     17284 C
e Semnopithecus_schistaceus.k141_628310                     45643 0 -     53123 C
e Semnopithecus_priam.k141_368201                           10098 0 -     20692 C
e Semnopithecus_johnii.k141_1300894                          1359 0 +     13764 C
e Semnopithecus_hypoleucos.k141_2141024                      1342 0 -      8815 C
e Semnopithecus_entellus.k141_1743075                       45569 0 +     45790 C
e Sapajus_macrocephalus.k141_966464                         24971 0 -     62485 C
e Sapajus_apella.ctg10                                   17345650 0 -  30362882 C
e Saimiri_ustus.k141_1282476                                 8865 0 -     76454 C
e Saimiri_sciureus.k141_1947592                              8928 0 +     60816 C
e Saimiri_oerstedii.k141_841116                              8951 0 +     67014 C
e Saimiri_macrodon.k141_2087127                              8857 0 -     60842 C
e Saimiri_cassiquiarensis.k141_808270                        8917 0 +     34089 C
e Saimiri_boliviensis.NW_024100938.1                     15677004 0 -  43202129 C
e Rhinopithecus_strykeri.ctg241                            462131 0 +   1472273 C
e Rhinopithecus_roxellana.NC_044549.1                   152255323 0 - 206558726 C
e Rhinopithecus_bieti.k119_554384                            2917 0 -     17045 C
e Rattus_norvegicus.chr11                                13918109 0 +  90463843 C
e Pygathrix_nigripes_a.k141_758202                             3041 0 -      8240 C
e Pygathrix_nigripes_b.ctg25                                14340860 0 -  15297009 C
e Pygathrix_cinerea.k141_951151                              3024 0 -      8225 C
e Psammomys_obesus.NESX01026517.1                           38689 0 +     77221 C
e Propithecus_verreauxi.k141_158021                         43864 0 -     48185 C
e Propithecus_tattersalli.k141_907138                       21601 0 -     53241 C
e Propithecus_perrieri.k141_7554                            21952 0 +     27322 C
e Propithecus_edwardsi.k141_1317105                         40029 0 -     44753 C
e Propithecus_diadema.k141_577245                           47642 0 +     52369 C
e Propithecus_coronatus.k141_1353159                         8308 0 +     11805 C
e Propithecus_coquerelli.NW_012147863.1                     22031 0 -     30946 C
e Prolemur_simus.MPIZ01000048.1                           6853224 0 +  12164890 C
e Presbytis_mitrata.k141_1767317                            10987 0 +     15869 C
e Presbytis_comata.k141_678168                              10998 0 +     11126 C
e Plecturocebus_moloch.k141_890597                          26982 0 -     75465 C
e Plecturocebus_miltoni.k141_841561                         16394 0 +    134592 C
e Plecturocebus_hoffmannsi.k141_985533                       4480 0 -    119457 C
e Plecturocebus_grovesi.k141_242819                         26672 0 +    152463 C
e Plecturocebus_dubius.k141_3565563                          7318 0 -     55515 C
e Plecturocebus_cupreus.k141_1145860                         3235 0 -     43940 C
e Plecturocebus_cinerascens.k141_744510                     26600 0 +    147771 C
e Plecturocebus_caligatus.k141_2539816                      16999 0 -     98129 C
e Plecturocebus_brunneus.k141_498086                        26760 0 +     67491 C
e Plecturocebus_bernhardi.k141_959214                       26547 0 +     44506 C
e Pithecia_vanzolinii.k141_831006                           15424 0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514 0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521 0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292 0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093 0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038 0 +     78826 C
e Pithecia_albicans.k141_991845                             45662 0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000342.1                3428473 0 -   4356645 C
e Piliocolobus_kirkii.k141_451083                            4872 0 -     13367 C
e Piliocolobus_gordonorum.k141_736355                       29708 0 +     67079 C
e Piliocolobus_badius.k141_512007                           29791 0 +     37672 C
e Peromyscus_maniculatus.KI615518.1                       4955898 0 -   8017169 C
e Perodicticus_potto.k141_1136815                           12412 0 +     61070 C
e Perodicticus_ibeanus.k141_117958                          11261 0 -     23713 C
e Papio_ursinus.k141_1345919                                 6613 0 -      7628 C
e Papio_papio.k141_979496                                   10748 0 +     14967 C
e Papio_kindae.k141_5458022                                 72216 0 -    104429 C
e Papio_hamadryas.Contig15                               47518225 0 +  47705337 C
e Papio_cynocephalus.k141_45376                              3943 0 +     25005 C
e Papio_anubis.CM001492.2                               188160853 0 - 188283584 C
e Otolemur_garnettii.GL873528.1                          18013566 0 -  38779656 C
e Otolemur_crassicaudatus.k141_505435                        5597 0 -     53940 C
e Onychomys_torridus.OnyTor_scaffold_12578                  43534 0 +     62360 C
e Ondatra_zibethicus.OndZib_scaffold_6821                  130841 0 +    145789 C
e Octodon_degus.JH651621.1                                3691411 2 +  10294119 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65680549 0 +  89412551 C
e Nycticebus_coucang.k141_771591                            15771 0 +     16181 C
e Nycticebus_bengalensis.LG16                            65572361 0 -  95554990 C
e Nasalis_larvatus.k141_1382660                              4266 0 +      5784 C
e Nannospalax_galili.KL201303.1                            241053 0 -    362372 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     96071 2 -    117718 I
e Muscardinus_avellanarius.MusAve_scaffold_9643             15310 0 +     98495 C
e Mus_spretus.CM004110.1                                 74337050 0 +  97876770 C
e Mus_pahari.LT608305.1                                  67561076 2 +  89017189 I
e Mus_musculus.chr16                                     75494324 0 +  98207768 C
e Mus_caroli.LT608236.1                                  70772270 0 +  92629107 C
e Mirza_zaza.k141_593947                                     5563 0 -     12809 C
e Miopithecus_ogouensis.k141_1528120                         2715 3 -     56045 I
e Microcebus_murinus.CM007691.1                          16514879 0 +  47401472 C
e Mesocricetus_auratus.KB708139.1                         1051952 0 -  26018355 C
e Meriones_unguiculatus.MerUng_scaffold_9483                 1701 0 +    115071 C
e Marmota_marmota.CZRN01000005.1                         36878674 0 +  64221397 C
e Mandrillus_sphinx.Contig144                             4454868 0 -   4543643 C
e Mandrillus_leucophaeus.scaffold125                     43442064 0 -  43563597 C
e Macaca_tonkeana.k141_476106                                3946 0 -     15846 C
e Macaca_thibetana.k99_662710                               21658 0 -     24607 C
e Macaca_silenus.Contig12                                43845489 0 +  43892939 C
e Macaca_siberu.k141_741907                                 20374 0 -     55006 C
e Macaca_radiata.k141_3680256                                6694 0 -     13212 C
e Macaca_nigra.k141_2105412                                  4884 0 -     16799 C
e Macaca_nemestrina.KQ004885.1                           11450345 0 +  11645122 C
e Macaca_mulatta.NC_041755.1                            196040175 0 + 196197964 C
e Macaca_maura.k141_188832                                   5356 0 -     30208 C
e Macaca_leonina.k141_467472                                 6848 0 -      7381 C
e Macaca_fuscata.k119_938422                                 3658 0 -     26361 C
e Macaca_fascicularis.k141_155037                           51548 0 +     63263 C
e Macaca_cyclopis.k119_883699                                3677 0 -     26467 C
e Macaca_assamensis.Contig65                             12711104 0 +  12821369 C
e Macaca_arctoides.k141_2201161                             24643 0 +     74745 C
e Loris_tardigradus.ctg97                                 3783436 0 +   6799190 C
e Loris_lydekkerianus.k141_550999                           15698 0 +     84689 C
e Lophocebus_aterrimus.ctg55                             19252892 0 +  19376315 C
e Lepilemur_septentrionalis.k141_710646                      2949 0 -     13103 C
e Lepilemur_ruficaudatus.k141_574529                        36903 0 -     38897 C
e Lepilemur_dorsalis.k141_134267                            58523 0 +     63517 C
e Lepilemur_ankaranensis.k141_884009                        29159 0 +     39228 C
e Lemur_catta.scaffold_1                                258411850 0 - 285822530 C
e Lagothrix_lagothricha.k141_12968                          54456 0 -    147782 C
e Indri_indri.k141_2197838                                   2017 0 +      3484 C
e Ictidomys_tridecemlineatus.JH393315.1                   7130807 0 +  13083262 C
e Hystrix_cristata.HysCri_scaffold_50788                     9978 0 +     22540 C
e Heterocephalus_glaber.JH602058.1                        2561073 2 +  31725842 I
e Hapalemur_occidentalis.k141_797938                        50175 0 -     54384 C
e Hapalemur_meridionalis.k141_186231                        33552 0 -     42470 C
e Hapalemur_griseus.k141_1387522                            10303 0 +     56096 C
e Hapalemur_gilberti.k141_279011                             4976 0 -     11661 C
e Hapalemur_alaotrensis.k141_1280836                         6498 0 +     10286 C
e Graphiurus_murinus.GraMur_scaffold_4493                   80221 0 +    118900 C
e Galagoides_demidoff.k141_1769638                          15240 0 +     27357 C
e Galago_senegalensis.k141_964197                           18096 0 -     43889 C
e Galago_moholi.ctg555                                     215735 0 -    847004 C
e Fukomys_damarensis.KN123630.1                          13896581 2 -  19261668 I
e Eulemur_sanfordi.k141_186399                              20499 0 -     29447 C
e Eulemur_rufus.k141_1620292                                37758 0 +     46535 C
e Eulemur_rubriventer.k141_411740                           23026 0 +     26808 C
e Eulemur_mongoz.k141_825972                                20570 0 +     27497 C
e Eulemur_macaco.k141_747087                                 3895 0 -     19505 C
e Eulemur_fulvus.k141_653297                                15912 0 +    109717 C
e Eulemur_flavifrons.k141_903901                            12427 0 +     60246 C
e Eulemur_coronatus.k141_3240342                            16105 0 +     36558 C
e Eulemur_collaris.k141_1015201                              2968 0 -      4292 C
e Eulemur_albifrons.k141_715837                              9709 0 +     13586 C
e Erythrocebus_patas.Contig8                             48781271 0 -  48907691 C
e Ellobius_talpinus.LOJH01076532.1                            575 0 +      9159 C
e Ellobius_lutescens.LOEQ01003611.1                        244244 0 -    369425 C
e Dolichotis_patagonum.DolPat_scaffold_14102                41008 2 -     73477 I
e Daubentonia_madagascariensis.ctg11                     16849561 0 +  31942871 C
e Dasyprocta_punctata.DasPun_flattened_line_634             62434 2 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                21294 2 +     26546 I
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 36355 2 -     67205 I
e Ctenodactylus_gundi.CteGun_scaffold_447                  214694 0 -    956709 C
e Cricetulus_griseus.LT883672.1                          53035430 0 +  72327488 C
e Cricetomys_gambianus.CriGam_scaffold_949                 283079 0 -    399297 C
e Colobus_polykomos.k141_688201                               484 3 +      1908 I
e Colobus_guereza.LG08                                   96946821 0 - 156195979 C
e Colobus_angolensis.KN983490.1                            283932 0 +    886210 C
e Chlorocebus_sabaeus.CM001963.2                         13528757 0 + 101219884 C
e Chlorocebus_pygerythrus.k141_596994                        4227 0 +     16635 C
e Chlorocebus_aethiops.ctg22                             15144238 8 -  15256731 I
e Chiropotes_sagulatus.k141_773804                          19597 0 +     40510 C
e Chiropotes_israelita.k141_1189915                         75416 0 +    196370 C
e Chinchilla_lanigera.JH721867.1                         15964804 2 +  43084221 I
e Cheracebus_torquatus.k141_315545                          50615 0 +     54541 C
e Cheracebus_regulus.k141_2128895                           45935 0 +     57117 C
e Cheracebus_lugens.k141_996499                              1636 0 +    188999 C
e Cheracebus_lucifer.k141_619653                             9898 0 -     18223 C
e Cheirogaleus_medius.k141_133808                           12729 0 +     13308 C
e Cheirogaleus_major.k141_1157592                           63609 0 -     68416 C
e Cercopithecus_roloway.k141_2263608                        26053 8 +     37128 I
e Cercopithecus_pogonias.k141_1631406                         703 0 +     11509 C
e Cercopithecus_petaurista.k141_64532                        6512 0 -     25661 C
e Cercopithecus_nictitans.k141_1129315                       6718 0 +     35577 C
e Cercopithecus_neglectus.k141_2169300                        518 8 -     27215 I
e Cercopithecus_mona.ctg12                               46482401 0 +  46592721 C
e Cercopithecus_albogularis.ctg51                              11995425 8 +  12117833 I
e Cercopithecus_lowei.k141_623764                           28894 8 +     35983 I
e Cercopithecus_hamlyni.k141_129805                          6704 0 +     16677 C
e Cercopithecus_diana.k141_2561715                           4098 0 +     15177 C
e Cercopithecus_cephus.k141_3893260                          3822 0 +     45019 C
e Cercopithecus_ascanius.k141_4123525                        6657 8 -     17608 I
e Cercocebus_torquatus.k141_3969582                         63794 0 -    107033 C
e Cercocebus_lunulatus.k141_4634644                          6484 0 -     21101 C
e Cercocebus_chrysogaster.k141_2328246                      31280 0 +     60454 C
e Cercocebus_atys.KQ010443.1                              6559803 0 +   6739814 C
e Cephalopachus_bancanus.k141_702587                        12545 0 +     21754 C
e Cebus_unicolor.k141_239009                                16856 0 +     25043 C
e Cebus_olivaceus.k141_93739                                12612 0 -     26817 C
e Cebus_albifrons.Contig22                               18895962 0 -  29618158 C
e Cavia_tschudii.CavTsc_scaffold_488                       180222 2 +    436027 I
e Cavia_porcellus.DS562889.1                             15802050 2 -  24440124 I
e Cavia_aperea.AVPZ01000278.1                            15790111 2 -  24422027 I
e Castor_canadensis.CasCan_scaffold_1326                      420 0 -    202837 C
e Carlito_syrichta.NW_007248099.1                          313530 0 +    345090 C
e Cacajao_melanocephalus.k141_1160263                       11847 0 -    134917 C
e Cacajao_hosomi.k141_303789                                19304 0 -    216513 C
e Cacajao_calvus.k141_96166                                 17257 0 +    125063 C
e Cacajao_ayresi.k141_724503                               118237 0 -    171031 C
e Avahi_peyrierasi.k141_798820                               5016 0 +      6337 C
e Avahi_laniger.k141_2840928                                11400 0 -     16375 C
e Ateles_paniscus.k141_1631200                              10338 0 -     25888 C
e Ateles_marginatus.k141_899112                             68369 0 +    119057 C
e Ateles_geoffroyi_a.k141_1300742                             20375 0 -     58268 C
e Ateles_chamek.k141_1072810                                15874 0 +     89302 C
e Ateles_belzebuth.k141_1348307                             64861 0 +     85812 C
e Ateles_geoffroyi_b.tarseq_2582                             9543587 0 +  39197703 C
e Arctocebus_calabarensis.k141_587554                        6888 0 +      9265 C
e Aotus_vociferans.k141_718647                              10299 0 +     23246 C
e Aotus_trivirgatus.k141_1740727                            10292 0 -    104377 C
e Aotus_nancymaae.KZ196176.1                              5753693 0 +   9889416 C
e Aotus_griseimembra.k141_3275623                            9737 0 +     22701 C
e Aotus_azarae.k141_3170768                                 66789 0 +     78111 C
e Alouatta_seniculus.k141_790278                             5179 0 -      9835 C
e Alouatta_puruensis.k141_1602819                            1034 0 -      1470 C
e Alouatta_palliata.k141_405616                              5902 0 +     16794 C
e Alouatta_nigerrima.k141_2187093                           30066 0 -     30219 C
e Alouatta_macconnelli.k141_2318944                          3484 0 -     24210 C
e Alouatta_juara.k141_799181                                  745 0 -      1641 C
e Alouatta_discolor.k141_2023149                             1000 0 +      5070 C
e Alouatta_caraya.k141_664908                                3701 0 -     12443 C
e Alouatta_belzebul.k141_276091                              1457 0 +     19852 C
e Allochrocebus_solatus.k141_371672                          6473 8 -     80423 I
e Allochrocebus_preussi.k141_1108977                         5517 8 +     38766 I
e Allochrocebus_lhoesti.k141_3566948                         6579 8 -     29318 I
e Allenopithecus_nigroviridis.k141_2469532                   5862 0 -     60446 C
e Acomys_cahirinus.AcoCah_scaffold_1625                    118303 0 -    189883 C
e Nomascus_siki_b.tarseq_453                             6542 0 +     12787 C
e Nomascus_annamensis.k141_762468                             679 0 -      2755 C
e Symphalangus_syndactylus.tarseq_24                        19267 0 -  13920577 C
e Pongo_pygmaeus.ctg62                                   19812244 0 +  19899266 C
e Pongo_abelii.NDHI03003816.1                              191597 0 -    373494 C
e Nomascus_gabriellae.k141_1400361                           1230 0 -      2203 C
e Nomascus_concolor.k141_256540                              7291 0 -      8966 C
e Hoolock_leuconedys.ctg83                                  28460123 0 -  32676794 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               17989 2 +    209709 AA
e Eptesicus_fuscus.JH977687.1                             4709376 0 +   6522550 C
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Petromus_typicus.PetTyp_scaffold_33007                    17492 0 -     36578 C
e Sorex_araneus.JH798170.1                               17774219 0 -  27805282 C
e Dinomys_branickii.DinBra_scaffold_1996                   160058 1 +    228994 I
e Erinaceus_europaeus.JH835290.1                         11541691 0 +  16010500 C
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           5010 0 -      6963 C
e Aplodontia_rufa.AprRuf_scaffold_101456                     2833 0 +     11424 C
e Oryctolagus_cuniculus.CM000803.1                      141884318 0 + 163896628 C
e Ochotona_princeps.JH802095.1                            5000346 0 -  23139505 C
e Lepus_americanus.LepAme_scaffold_62849                    21301 0 +     22452 C
e Perognathus_longimembris.PerPac_flattened_line_19359       2708 0 +     49596 C
e Dipodomys_stephensi.DipSte_scaffold_84338                  3084 0 -     11986 C
e Dipodomys_ordii.KN672545.1                              3660730 0 +   4240102 C
e Suricata_suricatta.SurSur_flattened_line_20339            33645 0 +     62062 C
e Nomascus_siki_a.k141_421408                                  1144 0 +     16235 C
e Chrysochloris_asiatica.ChrAsi_scaffold_954668              1346 0 -      1738 C
e Ziphius_cavirostris.ZipCav_flattened_line_60625            2376 0 -     13665 C
e Zalophus_californianus.ZalCal_flattened_line_4097        220313 0 -    227762 C
e Vulpes_lagopus.VulLag_flattened_line_2045                144841 0 -    281493 C
e Vicugna_pacos.KN269600.1                                1528677 0 -   2331223 C
e Ursus_maritimus.KK498671.1                              6521164 0 +  28682327 C
e Uropsilus_gracilis.UroGra_scaffold_4115                     498 0 +    136657 C
e Tursiops_truncatus.MRVK01000923.1                      69317637 0 -  96451834 C
e Trichechus_manatus.JH594618.1                          16090295 0 +  31416278 C
e Tragulus_javanicus.TraJav_scaffold_14717                   9488 743 +     90398 I
e Tonatia_saurophila.TonSau_scaffold_3334                  138548 0 -    259118 C
e Tolypeutes_matacus.TolMat_scaffold_475685                   850 0 -      3104 C
e Tapirus_terrestris.TapTer_scaffold_14939                  61891 0 +     99546 C
e Tapirus_indicus.TapInd_scaffold_176                      811249 0 +   1148477 C
e Tamandua_tetradactyla.TamTet_scaffold_26877               17773 0 +     45698 C
e Tadarida_brasiliensis.TadBra_scaffold_61492                2780 0 +     20549 C
e Sus_scrofa.CM000824.4                                 189275422 0 + 218635234 C
e Spilogale_gracilis.SpiGra_flattened_line_905             239531 0 -    276980 C
e Solenodon_paradoxus.SolPar_flattened_line_1012            23998 0 +    739146 C
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   40042 0 -    114521 C
e Saiga_tatarica.SaiTat_scaffold_371890                      1374 0 -      4338 C
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Rhinolophus_sinicus.LVEH01000179.1                      1793047 0 +   2252614 C
e Rangifer_tarandus.RanTarSib_scaffold_24239                20963 0 +     68503 C
e Puma_concolor.QAVW01000427.1                          131540462 0 - 161321710 C
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Pteronura_brasiliensis.PteBra_flattened_line_1343        250741 0 -    344369 C
e Pteronotus_parnellii.KE867983.1                            6552 0 -     27784 C
e Procavia_capensis.ProCapCap_scaffold_149274                4405 0 -      9567 C
e Platanista_gangetica.PlaMin_flattened_line_72990           9852 0 +     21690 C
e Pipistrellus_pipistrellus.PipPip_scaffold_3306            99992 0 +    112873 C
e Phocoena_phocoena.PhoPho_flattened_line_53071              3374 0 +      8220 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    121832 0 -    135482 C
e Pantholops_hodgsonii.KE114631.1                         1071976 0 -   1292953 C
e Panthera_tigris.KE721879.1                              5033813 0 -   6340057 C
e Panthera_pardus.KV860323.1                              3644165 0 +  18214204 C
e Panthera_onca.PanOnc_flattened_line_1615                  40350 0 +    295523 C
e Ovis_canadensis.OviCan_scaffold_6251                      84339 0 +    140051 C
e Ovis_aries.CM001582.2                                 134083105 0 - 275406953 C
e Otocyon_megalotis.JAEUCK010005121.1                      315614 0 -    505867 C
e Orycteropus_afer.OryAfe_flattened_line_13509              64629 0 -     66828 C
e Orcinus_orca.KB316965.1                                 7228907 0 -   7562323 C
e Okapia_johnstoni.LVCL01S0017931.1                         42168 0 +     78940 C
e Odocoileus_virginianus.KZ101650.1                       1084098 0 +   1425656 C
e Odobenus_rosmarus.KB229369.1                             685456 0 -   3126709 C
e Nyctereutes_procyonoides.CAJHUB010000786.1                38476 0 +   3668941 C
e Noctilio_leporinus.NocLep_scaffold_12062                  50970 0 +     94413 C
e Neophocaena_asiaeorientalis.KZ688543.1                  3955233 0 -   4490290 C
e Neomonachus_schauinslandi.NINY01007774.1                4490752 0 -  14209539 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             8100 0 -      8794 C
e Myotis_myotis.MyoMyo_scaffold_6123                        14456 0 +     66751 C
e Myotis_lucifugus.GL429887.1                             3469215 0 -   3747815 C
e Myotis_davidii.KB114863.1                               5023131 0 +   6462685 C
e Myotis_brandtii.KE161952.1                               971710 0 +   8389877 C
e Mustela_putorius.JH417978.1                             4429094 0 -  28371801 C
e Murina_feae.MurFea_scaffold_2254                          24832 0 -    100666 C
e Mungos_mungo.MunMun_flattened_line_8729                  150730 0 -    168139 C
e Moschus_moschiferus.MosMos_scaffold_78805                  6668 0 -     19904 C
e Mormoops_blainvillei.MorMeg_scaffold_2952                163902 0 +    265003 C
e Monodon_monoceros.MonMon_M_scaffold_5598                 150642 0 +    154973 C
e Mirounga_angustirostris.MirAng_flattened_line_8852        17354 0 -    104932 C
e Miniopterus_schreibersii.MinSch_scaffold_24116            37915 0 +     45743 C
e Miniopterus_natalensis.LDJU01000022.1                   8213424 0 +  10048721 C
e Micronycteris_hirsuta.MicHir_scaffold_37978               25371 0 -     32043 C
e Microgale_talazaci.MicTal_scaffold_34660                  41905 0 -     48017 C
e Mesoplodon_bidens.MesBid_scaffold_96348                    2868 0 -     12939 C
e Mellivora_capensis.MelCap_flattened_line_15433             6988 0 -     87323 C
e Megaderma_lyra.MegLyr_scaffold_3562                       66018 0 -    234502 C
e Manis_pentadactyla.KN017078.1                             40177 0 +     58827 C
e Manis_javanica.JSZB01003966.1                            152583 0 +    252755 C
e Lycaon_pictus.CM007556.1                               11095611 0 +  39895028 C
e Loxodonta_africana.GL010040.1                          20599220 0 -  62548349 C
e Lipotes_vexillifer.KE558548.1                            140211 0 +   3060487 C
e Leptonychotes_weddellii.KB714749.1                      3091858 0 -   3498232 C
e Lasiurus_borealis.LasBor_scaffold_59542                    5971 0 +     26176 C
e Kogia_breviceps.KogBre_flattened_line_35920               27896 0 +     37189 C
e Inia_geoffrensis.IniGeo_flattened_line_66725              13277 0 +     17520 C
e Hyaena_hyaena.HyaHya_flattened_line_20729                 23526 0 -     67322 C
e Hipposideros_galeritus.HipGal_scaffold_7653                6018 0 +     86108 C
e Hipposideros_armiger.JXIK01001085.1                      283468 0 -    477199 C
e Hippopotamus_amphibius.HipAmp_scaffold_1308              151079 0 +    277961 C
e Heterohyrax_brucei.HetBruBak_scaffold_25354               63299 0 +     73687 C
e Hemitragus_hylocrius.HemHyl_scaffold_16669                33319 0 -     91191 C
e Helogale_parvula.HelPar_flattened_line_22962              23053 0 +     53719 C
e Giraffa_tippelskirchi.LVKQ01S012154.1                    186427 0 -    189561 C
e Felis_nigripes.FelNig_flattened_line_8080                 27430 0 +     52776 C
e Felis_catus_fca126.CM031420.1                         129286331 0 - 158578461 C
e Eubalaena_japonica.EubJap_flattened_line_7756             65746 0 +     89355 C
e Eschrichtius_robustus.EscRob_flattened_line_685          319289 0 +    330699 C
e Equus_przewalskii.ATBW01073585.1                          16739 0 +     92910 C
e Equus_caballus.CM000402.2                              13355249 0 +  41866177 C
e Equus_asinus.JREZ01000062.1                             5856763 0 -   7175178 C
e Enhydra_lutris.KZ291749.1                              85877885 0 +  99434291 C
e Elephantulus_edwardii.JH947210.1                        7834591 0 +  15467074 C
e Elaphurus_davidianus.JRFZ01086400.1                     1496650 0 +   1727528 C
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Echinops_telfairi.JH980316.1                           23000337 0 -  44670279 C
e Diceros_bicornis.DicBicMic_scaffold_9545                   7303 0 +    151128 C
e Dicerorhinus_sumatrensis.PEKH010003161.1                 326671 0 +    993696 C
e Desmodus_rotundus.KZ672188.1                           18701624 0 -  18957592 C
e Delphinapterus_leucas.KZ290064.1                       80041049 0 -  96802777 C
e Dasypus_novemcinctus.JH568778.1                          186070 0 -   6883506 C
e Cryptoprocta_ferox.CryFer_flattened_line_19014            57915 0 -     70449 C
e Crocidura_indochinensis.CroInd_scaffold_27484              2525 0 -     22648 C
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         2933 0 -      5782 C
e Condylura_cristata.JH655880.1                          60622569 0 +  78930452 C
e Choloepus_hoffmanni.KN194586.1                           764429 0 +    964067 C
e Choloepus_didactylus.ChoDid_scaffold_36182                19125 0 -     21363 C
e Ceratotherium_simum_cottoni.CerCot_scaffold_160623         7772 0 -      9338 C
e Catagonus_wagneri.CatWag_scaffold_1305                   163080 0 -    276539 C
e Carollia_perspicillata.CarPer_scaffold_4436               62412 0 +     67245 C
e Capra_hircus.CM004562.1                               135712269 0 - 157403528 C
e Capra_aegagrus.CM003214.1                              21333914 0 + 157394656 C
e Canis_lupus_orion.HG994411.1                           16462940 0 -  44759192 C
e Canis_lupus_familiaris.chr31                           11096155 0 +  39895921 C
e Canis_lupus_dingo.QKWQ01001993.1                       11273444 0 -  35597290 C
e Canis_lupus_VD.CanFam_VD_scaffold_16982                   21735 0 +     87036 C
e CanFam4.chr31                                          11526761 0 +  39901454 C
e Camelus_ferus.KB016973.1                                2977007 0 +   6889770 C
e Camelus_dromedarius.KN271192.1                           401270 0 -  15254737 C
e Camelus_bactrianus.KN276303.1                           3223569 0 -   8989139 C
e Bubalus_bubalis.KI419065.1                               675262 0 +   1914593 C
e Bos_taurus.CM000177.6                                  22665325 0 + 158972876 C
e Bos_mutus.JH883513.1                                     418912 0 +    998990 C
e Bos_indicus.CM003021.1                                 22956671 0 + 161108492 C
e Bison_bison.KN264915.1                                   302573 0 -   6870073 C
e Beatragus_hunteri.BeaHun_scaffold_21644                   48434 0 -     72089 C
e Balaenoptera_bonaerensis.DF502048.1                        9619 0 -     13118 C
e Balaenoptera_acutorostrata.KI537095.1                  26384446 0 +  51448160 C
e Artibeus_jamaicensis.ArtJam_scaffold_41619                11398 0 -     29036 C
e Antilocapra_americana.AntAmePen_scaffold_27338             3402 0 +     55446 C
e Anoura_caudifer.AnoCau_scaffold_422                      392989 0 -    631301 C
e Ammotragus_lervia.NIVO01013474.1                        3525970 0 +   4113121 C
e Ailurus_fulgens.LNAC01000003.1                          7100422 0 -  16596857 C
e Ailuropoda_melanoleuca.LNAT01000321.1                  10663896 0 +  23371972 C
e Acinonyx_jubatus.LLWD01000356.1                         2039936 0 +   3721120 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           21669 2 -    119109 I
e Glis_glis.GliGli_scaffold_79770                           16906 0 -     18683 C
e Zapus_hudsonius.ZapHud_scaffold_202118                     1494 0 -      3360 C
e Jaculus_jaculus.JH725517.1                              8579413 0 +  11848649 C
e Hylobates_pileatus_a.tarseq_592                             37116 0 -     60944 C
e Hylobates_pileatus_b.ContigUN                                 14629008 0 -  25970782 C
e Allactaga_bullata.AllBul_scaffold_141108                   1674 0 -      7259 C
e Hylobates_muelleri.k141_1139146                            1560 0 +      4161 C
e Hylobates_klossii.k141_468230                              3662 0 +      5464 C
e Hylobates_agilis.k141_1136966                               182 0 +      9785 C
e Hylobates_abbotti.k141_1816750                             2173 0 +      3202 C
e Galeopterus_variegatus.GalVar_scaffold_354               160008 0 +    324696 C
e Microtus_ochrogaster.CM001673.1                        22825041 0 -  98408828 C
e Xerus_inauris.XerIna_scaffold_7898                       131999 0 -    134049 C
e Varecia_variegata.k141_775891                             29401 0 -     33872 C
e Varecia_rubra.k141_432109                                  9866 0 -     20643 C
e Tupaia_tana.TupTan_flattened_line_68454                   10398 0 +     13056 C
e Tupaia_chinensis.KB320831.1                             2801575 0 -   3938065 C
e Trachypithecus_pileatus.k141_532233                       30117 0 -     40754 C
e Trachypithecus_phayrei.ctg364                            232446 0 -   1198723 C
e Trachypithecus_obscurus.k141_588024                        4947 0 +      4963 I
e Trachypithecus_melamera.k141_950981                        2223 0 -      3512 C
e Trachypithecus_leucocephalus.k141_352489                   1208 0 +      9423 C
e Trachypithecus_laotum.k141_897381                         45637 0 -     53586 C
e Trachypithecus_hatinhensis.k141_641377                     1233 0 +      1365 C
e Trachypithecus_germaini.k141_240878                        5062 3 -     24955 I
e Trachypithecus_geei.k141_137495                           30097 0 -     42322 C
e Trachypithecus_francoisi.k141_1012484                       868 0 +      8809 C
e Trachypithecus_cristatus.k141_968903                      32584 3 +     43409 I
e Trachypithecus_crepusculus.k141_863597                     4935 0 -     23436 C
e Trachypithecus_auratus.k141_672638                         4942 3 +     38635 I
e Theropithecus_gelada.CM009951.1                       194012386 0 - 194193292 C
e Tarsius_wallacei.k141_48636                               64696 0 +     65473 C
e Tarsius_lariang.k141_609102                               31387 0 +     42269 C
e Spermophilus_dauricus.KZ294190.1                        2244508 0 +   2842873 C
e Sigmodon_hispidus.SigHis_scaffold_11332                  105896 0 -    120886 C
e Semnopithecus_vetulus.k141_748269                          4697 0 +     17284 C
e Semnopithecus_schistaceus.k141_628310                     45643 0 -     53123 C
e Semnopithecus_priam.k141_368201                           10098 0 -     20692 C
e Semnopithecus_johnii.k141_1300894                          1359 0 +     13764 C
e Semnopithecus_hypoleucos.k141_2141024                      1342 0 -      8815 C
e Semnopithecus_entellus.k141_1743075                       45569 0 +     45790 C
e Sapajus_macrocephalus.k141_966464                         24971 0 -     62485 C
e Sapajus_apella.ctg10                                   17345650 0 -  30362882 C
e Saimiri_ustus.k141_1282476                                 8865 0 -     76454 C
e Saimiri_sciureus.k141_1947592                              8928 0 +     60816 C
e Saimiri_oerstedii.k141_841116                              8951 0 +     67014 C
e Saimiri_macrodon.k141_2087127                              8857 0 -     60842 C
e Saimiri_cassiquiarensis.k141_808270                        8917 0 +     34089 C
e Saimiri_boliviensis.NW_024100938.1                     15677004 0 -  43202129 C
e Rhinopithecus_strykeri.ctg241                            462131 0 +   1472273 C
e Rhinopithecus_roxellana.NC_044549.1                   152255323 0 - 206558726 C
e Rhinopithecus_bieti.k119_554384                            2917 0 -     17045 C
e Rattus_norvegicus.chr11                                13918109 0 +  90463843 C
e Pygathrix_nigripes_a.k141_758202                             3041 0 -      8240 C
e Pygathrix_nigripes_b.ctg25                                14340860 0 -  15297009 C
e Pygathrix_cinerea.k141_951151                              3024 0 -      8225 C
e Psammomys_obesus.NESX01026517.1                           38689 0 +     77221 C
e Propithecus_verreauxi.k141_158021                         43864 0 -     48185 C
e Propithecus_tattersalli.k141_907138                       21601 0 -     53241 C
e Propithecus_perrieri.k141_7554                            21952 0 +     27322 C
e Propithecus_edwardsi.k141_1317105                         40029 0 -     44753 C
e Propithecus_diadema.k141_577245                           47642 0 +     52369 C
e Propithecus_coronatus.k141_1353159                         8308 0 +     11805 C
e Propithecus_coquerelli.NW_012147863.1                     22031 0 -     30946 C
e Prolemur_simus.MPIZ01000048.1                           6853224 0 +  12164890 C
e Presbytis_mitrata.k141_1767317                            10987 0 +     15869 C
e Presbytis_comata.k141_678168                              10998 0 +     11126 C
e Plecturocebus_moloch.k141_890597                          26982 0 -     75465 C
e Plecturocebus_miltoni.k141_841561                         16394 0 +    134592 C
e Plecturocebus_hoffmannsi.k141_985533                       4480 0 -    119457 C
e Plecturocebus_grovesi.k141_242819                         26672 0 +    152463 C
e Plecturocebus_dubius.k141_3565563                          7318 0 -     55515 C
e Plecturocebus_cupreus.k141_1145860                         3235 0 -     43940 C
e Plecturocebus_cinerascens.k141_744510                     26600 0 +    147771 C
e Plecturocebus_caligatus.k141_2539816                      16999 0 -     98129 C
e Plecturocebus_brunneus.k141_498086                        26760 0 +     67491 C
e Plecturocebus_bernhardi.k141_959214                       26547 0 +     44506 C
e Pithecia_vanzolinii.k141_831006                           15424 0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514 0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521 0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292 0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093 0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038 0 +     78826 C
e Pithecia_albicans.k141_991845                             45662 0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000342.1                3428473 0 -   4356645 C
e Piliocolobus_kirkii.k141_451083                            4872 0 -     13367 C
e Piliocolobus_gordonorum.k141_736355                       29708 0 +     67079 C
e Piliocolobus_badius.k141_512007                           29791 0 +     37672 C
e Peromyscus_maniculatus.KI615518.1                       4955898 0 -   8017169 C
e Perodicticus_potto.k141_1136815                           12412 0 +     61070 C
e Perodicticus_ibeanus.k141_117958                          11261 0 -     23713 C
e Papio_ursinus.k141_1345919                                 6613 0 -      7628 C
e Papio_papio.k141_979496                                   10748 0 +     14967 C
e Papio_kindae.k141_5458022                                 72216 0 -    104429 C
e Papio_hamadryas.Contig15                               47518225 0 +  47705337 C
e Papio_cynocephalus.k141_45376                              3943 0 +     25005 C
e Papio_anubis.CM001492.2                               188160853 0 - 188283584 C
e Otolemur_garnettii.GL873528.1                          18013566 0 -  38779656 C
e Otolemur_crassicaudatus.k141_505435                        5597 0 -     53940 C
e Onychomys_torridus.OnyTor_scaffold_12578                  43534 0 +     62360 C
e Ondatra_zibethicus.OndZib_scaffold_6821                  130841 0 +    145789 C
e Octodon_degus.JH651621.1                                3691411 2 +  10294119 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65680549 0 +  89412551 C
e Nycticebus_coucang.k141_771591                            15771 0 +     16181 C
e Nycticebus_bengalensis.LG16                            65572361 0 -  95554990 C
e Nasalis_larvatus.k141_1382660                              4266 0 +      5784 C
e Nannospalax_galili.KL201303.1                            241053 0 -    362372 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     96071 2 -    117718 I
e Muscardinus_avellanarius.MusAve_scaffold_9643             15310 0 +     98495 C
e Mus_spretus.CM004110.1                                 74337050 0 +  97876770 C
e Mus_pahari.LT608305.1                                  67561076 2 +  89017189 I
e Mus_musculus.chr16                                     75494324 0 +  98207768 C
e Mus_caroli.LT608236.1                                  70772270 0 +  92629107 C
e Mirza_zaza.k141_593947                                     5563 0 -     12809 C
e Miopithecus_ogouensis.k141_1528120                         2715 3 -     56045 I
e Microcebus_murinus.CM007691.1                          16514879 0 +  47401472 C
e Mesocricetus_auratus.KB708139.1                         1051952 0 -  26018355 C
e Meriones_unguiculatus.MerUng_scaffold_9483                 1701 0 +    115071 C
e Marmota_marmota.CZRN01000005.1                         36878674 0 +  64221397 C
e Mandrillus_sphinx.Contig144                             4454868 0 -   4543643 C
e Mandrillus_leucophaeus.scaffold125                     43442064 0 -  43563597 C
e Macaca_tonkeana.k141_476106                                3946 0 -     15846 C
e Macaca_thibetana.k99_662710                               21658 0 -     24607 C
e Macaca_silenus.Contig12                                43845489 0 +  43892939 C
e Macaca_siberu.k141_741907                                 20374 0 -     55006 C
e Macaca_radiata.k141_3680256                                6694 0 -     13212 C
e Macaca_nigra.k141_2105412                                  4884 0 -     16799 C
e Macaca_nemestrina.KQ004885.1                           11450345 0 +  11645122 C
e Macaca_mulatta.NC_041755.1                            196040175 0 + 196197964 C
e Macaca_maura.k141_188832                                   5356 0 -     30208 C
e Macaca_leonina.k141_467472                                 6848 0 -      7381 C
e Macaca_fuscata.k119_938422                                 3658 0 -     26361 C
e Macaca_fascicularis.k141_155037                           51548 0 +     63263 C
e Macaca_cyclopis.k119_883699                                3677 0 -     26467 C
e Macaca_assamensis.Contig65                             12711104 0 +  12821369 C
e Macaca_arctoides.k141_2201161                             24643 0 +     74745 C
e Loris_tardigradus.ctg97                                 3783436 0 +   6799190 C
e Loris_lydekkerianus.k141_550999                           15698 0 +     84689 C
e Lophocebus_aterrimus.ctg55                             19252892 0 +  19376315 C
e Lepilemur_septentrionalis.k141_710646                      2949 0 -     13103 C
e Lepilemur_ruficaudatus.k141_574529                        36903 0 -     38897 C
e Lepilemur_dorsalis.k141_134267                            58523 0 +     63517 C
e Lepilemur_ankaranensis.k141_884009                        29159 0 +     39228 C
e Lemur_catta.scaffold_1                                258411850 0 - 285822530 C
e Lagothrix_lagothricha.k141_12968                          54456 0 -    147782 C
e Indri_indri.k141_2197838                                   2017 0 +      3484 C
e Ictidomys_tridecemlineatus.JH393315.1                   7130807 0 +  13083262 C
e Hystrix_cristata.HysCri_scaffold_50788                     9978 0 +     22540 C
e Heterocephalus_glaber.JH602058.1                        2561073 2 +  31725842 I
e Hapalemur_occidentalis.k141_797938                        50175 0 -     54384 C
e Hapalemur_meridionalis.k141_186231                        33552 0 -     42470 C
e Hapalemur_griseus.k141_1387522                            10303 0 +     56096 C
e Hapalemur_gilberti.k141_279011                             4976 0 -     11661 C
e Hapalemur_alaotrensis.k141_1280836                         6498 0 +     10286 C
e Graphiurus_murinus.GraMur_scaffold_4493                   80221 0 +    118900 C
e Galagoides_demidoff.k141_1769638                          15240 0 +     27357 C
e Galago_senegalensis.k141_964197                           18096 0 -     43889 C
e Galago_moholi.ctg555                                     215735 0 -    847004 C
e Fukomys_damarensis.KN123630.1                          13896581 2 -  19261668 I
e Eulemur_sanfordi.k141_186399                              20499 0 -     29447 C
e Eulemur_rufus.k141_1620292                                37758 0 +     46535 C
e Eulemur_rubriventer.k141_411740                           23026 0 +     26808 C
e Eulemur_mongoz.k141_825972                                20570 0 +     27497 C
e Eulemur_macaco.k141_747087                                 3895 0 -     19505 C
e Eulemur_fulvus.k141_653297                                15912 0 +    109717 C
e Eulemur_flavifrons.k141_903901                            12427 0 +     60246 C
e Eulemur_coronatus.k141_3240342                            16105 0 +     36558 C
e Eulemur_collaris.k141_1015201                              2968 0 -      4292 C
e Eulemur_albifrons.k141_715837                              9709 0 +     13586 C
e Erythrocebus_patas.Contig8                             48781271 0 -  48907691 C
e Ellobius_talpinus.LOJH01076532.1                            575 0 +      9159 C
e Ellobius_lutescens.LOEQ01003611.1                        244244 0 -    369425 C
e Dolichotis_patagonum.DolPat_scaffold_14102                41008 2 -     73477 I
e Daubentonia_madagascariensis.ctg11                     16849561 0 +  31942871 C
e Dasyprocta_punctata.DasPun_flattened_line_634             62434 2 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                21294 2 +     26546 I
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 36355 2 -     67205 I
e Ctenodactylus_gundi.CteGun_scaffold_447                  214694 0 -    956709 C
e Cricetulus_griseus.LT883672.1                          53035430 0 +  72327488 C
e Cricetomys_gambianus.CriGam_scaffold_949                 283079 0 -    399297 C
e Colobus_polykomos.k141_688201                               484 3 +      1908 I
e Colobus_guereza.LG08                                   96946821 0 - 156195979 C
e Colobus_angolensis.KN983490.1                            283932 0 +    886210 C
e Chlorocebus_sabaeus.CM001963.2                         13528757 0 + 101219884 C
e Chlorocebus_pygerythrus.k141_596994                        4227 0 +     16635 C
e Chlorocebus_aethiops.ctg22                             15144238 8 -  15256731 I
e Chiropotes_sagulatus.k141_773804                          19597 0 +     40510 C
e Chiropotes_israelita.k141_1189915                         75416 0 +    196370 C
e Chinchilla_lanigera.JH721867.1                         15964804 2 +  43084221 I
e Cheracebus_torquatus.k141_315545                          50615 0 +     54541 C
e Cheracebus_regulus.k141_2128895                           45935 0 +     57117 C
e Cheracebus_lugens.k141_996499                              1636 0 +    188999 C
e Cheracebus_lucifer.k141_619653                             9898 0 -     18223 C
e Cheirogaleus_medius.k141_133808                           12729 0 +     13308 C
e Cheirogaleus_major.k141_1157592                           63609 0 -     68416 C
e Cercopithecus_roloway.k141_2263608                        26053 8 +     37128 I
e Cercopithecus_pogonias.k141_1631406                         703 0 +     11509 C
e Cercopithecus_petaurista.k141_64532                        6512 0 -     25661 C
e Cercopithecus_nictitans.k141_1129315                       6718 0 +     35577 C
e Cercopithecus_neglectus.k141_2169300                        518 8 -     27215 I
e Cercopithecus_mona.ctg12                               46482401 0 +  46592721 C
e Cercopithecus_albogularis.ctg51                              11995425 8 +  12117833 I
e Cercopithecus_lowei.k141_623764                           28894 8 +     35983 I
e Cercopithecus_hamlyni.k141_129805                          6704 0 +     16677 C
e Cercopithecus_diana.k141_2561715                           4098 0 +     15177 C
e Cercopithecus_cephus.k141_3893260                          3822 0 +     45019 C
e Cercopithecus_ascanius.k141_4123525                        6657 8 -     17608 I
e Cercocebus_torquatus.k141_3969582                         63794 0 -    107033 C
e Cercocebus_lunulatus.k141_4634644                          6484 0 -     21101 C
e Cercocebus_chrysogaster.k141_2328246                      31280 0 +     60454 C
e Cercocebus_atys.KQ010443.1                              6559803 0 +   6739814 C
e Cephalopachus_bancanus.k141_702587                        12545 0 +     21754 C
e Cebus_unicolor.k141_239009                                16856 0 +     25043 C
e Cebus_olivaceus.k141_93739                                12612 0 -     26817 C
e Cebus_albifrons.Contig22                               18895962 0 -  29618158 C
e Cavia_tschudii.CavTsc_scaffold_488                       180222 2 +    436027 I
e Cavia_porcellus.DS562889.1                             15802050 2 -  24440124 I
e Cavia_aperea.AVPZ01000278.1                            15790111 2 -  24422027 I
e Castor_canadensis.CasCan_scaffold_1326                      420 0 -    202837 C
e Carlito_syrichta.NW_007248099.1                          313530 0 +    345090 C
e Cacajao_melanocephalus.k141_1160263                       11847 0 -    134917 C
e Cacajao_hosomi.k141_303789                                19304 0 -    216513 C
e Cacajao_calvus.k141_96166                                 17257 0 +    125063 C
e Cacajao_ayresi.k141_724503                               118237 0 -    171031 C
e Avahi_peyrierasi.k141_798820                               5016 0 +      6337 C
e Avahi_laniger.k141_2840928                                11400 0 -     16375 C
e Ateles_paniscus.k141_1631200                              10338 0 -     25888 C
e Ateles_marginatus.k141_899112                             68369 0 +    119057 C
e Ateles_geoffroyi_a.k141_1300742                             20375 0 -     58268 C
e Ateles_chamek.k141_1072810                                15874 0 +     89302 C
e Ateles_belzebuth.k141_1348307                             64861 0 +     85812 C
e Ateles_geoffroyi_b.tarseq_2582                             9543587 0 +  39197703 C
e Arctocebus_calabarensis.k141_587554                        6888 0 +      9265 C
e Aotus_vociferans.k141_718647                              10299 0 +     23246 C
e Aotus_trivirgatus.k141_1740727                            10292 0 -    104377 C
e Aotus_nancymaae.KZ196176.1                              5753693 0 +   9889416 C
e Aotus_griseimembra.k141_3275623                            9737 0 +     22701 C
e Aotus_azarae.k141_3170768                                 66789 0 +     78111 C
e Alouatta_seniculus.k141_790278                             5179 0 -      9835 C
e Alouatta_puruensis.k141_1602819                            1034 0 -      1470 C
e Alouatta_palliata.k141_405616                              5902 0 +     16794 C
e Alouatta_nigerrima.k141_2187093                           30066 0 -     30219 C
e Alouatta_macconnelli.k141_2318944                          3484 0 -     24210 C
e Alouatta_juara.k141_799181                                  745 0 -      1641 C
e Alouatta_discolor.k141_2023149                             1000 0 +      5070 C
e Alouatta_caraya.k141_664908                                3701 0 -     12443 C
e Alouatta_belzebul.k141_276091                              1457 0 +     19852 C
e Allochrocebus_solatus.k141_371672                          6473 8 -     80423 I
e Allochrocebus_preussi.k141_1108977                         5517 8 +     38766 I
e Allochrocebus_lhoesti.k141_3566948                         6579 8 -     29318 I
e Allenopithecus_nigroviridis.k141_2469532                   5862 0 -     60446 C
e Acomys_cahirinus.AcoCah_scaffold_1625                    118303 0 -    189883 C
e Nomascus_siki_b.tarseq_453                             6542 0 +     12787 C
e Nomascus_annamensis.k141_762468                             679 0 -      2755 C
e Symphalangus_syndactylus.tarseq_24                        19267 0 -  13920577 C
e Pongo_pygmaeus.ctg62                                   19812244 0 +  19899266 C
e Pongo_abelii.NDHI03003816.1                              191597 0 -    373494 C
e Nomascus_gabriellae.k141_1400361                           1230 0 -      2203 C
e Nomascus_concolor.k141_256540                              7291 0 -      8966 C
e Hoolock_leuconedys.ctg83                                  28460123 0 -  32676794 I
e Pan_paniscus.CM003386.1                               127578967 7 - 205426864 I
e Pan_troglodytes.CM009241.2                            120156127 7 - 196562556 I
e Gorilla_gorilla.LT578340.1                            119656788 7 - 195582420 I
e Gorilla_beringei.k141_111300                               9688 7 -     14630 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               17991  6 +    209709 A---A------AA-------T------A
s Acinonyx_jubatus.LLWD01000356.1                         2039936  8 +   3721120 a---a------gcaa-----t------t
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    118303  7 -    189883 A---A------AT-----AAC-------
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10663896  8 +  23371972 a---a------acaa-----t------t
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7100422  8 -  16596857 A---A------AC-----AAT------T
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_141108                   1674  8 -      7259 A---A------AC-----AAG------A
i Allactaga_bullata.AllBul_scaffold_141108              C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   5862  9 -     60446 A-A-A------AA-----AAA------A
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_2676980                        46529 15 +     59001 A---A------AA----AAAAAAAAAAA
i Allochrocebus_lhoesti.k141_2676980                    I 3 n 8
s Allochrocebus_preussi.k141_1848067                         5783 16 +      6015 A---A------AA---AAAAAAAAAAAA
i Allochrocebus_preussi.k141_1848067                    I 4 n 8
s Allochrocebus_solatus.k141_2096133                            6 15 +     12172 A---A------AA----AAAAAAAAAAA
i Allochrocebus_solatus.k141_2096133                    n 8 n 8
s Alouatta_belzebul.k141_276091                              1457  8 +     19852 a---a------aaaa-----t------a
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                3701  8 -     12443 a---a------aaaa-----t------a
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                             1000  8 +      5070 a---a------aaaa-----t------a
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                  745  8 -      1641 a---a------aaaa-----t------a
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          3484  8 -     24210 a---a------aaaa-----t------a
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           30066  8 -     30219 a---a------aaaa-----t------a
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_405616                              5902  8 +     16794 a---a------aaaa-----t------a
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                            1034  8 -      1470 a---a------aaaa-----t------a
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             5179  8 -      9835 a---a------aaaa-----t------a
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3525970  8 +   4113121 A---A------AC-----AGT------T
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      392989  8 -    631301 A---A------AC-----TAT------A
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             3402  8 +     55446 A---A------AC-----AAT------T
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 66789  8 +     78111 a---a------aaaa-----t------a
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            9737  8 +     22701 A---A------AA-----AAT------A
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5753693  8 +   9889416 a---a------aaaa-----t------a
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                            10292  8 -    104377 a---a------aaaa-----t------a
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                              10299  8 +     23246 a---a------aaaa-----t------a
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     2833  8 +     11424 G---A------TC-----AAG------A
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        6888  8 +      9265 g---a------aaaa-----t------a
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                11398  8 -     29036 A---A------AC-----TAT------A
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9543587  8 +  39197703 a---a------aaaa-----t------a
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             64861  8 +     85812 a---a------aaaa-----t------a
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                15874  8 +     89302 a---a------aaaa-----t------a
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             20375  8 -     58268 a---a------aaaa-----t------a
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             68369  8 +    119057 a---a------aaaa-----t------a
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              10338  8 -     25888 a---a------aaaa-----t------a
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                11400  8 -     16375 a---a------aaaa-----t------a
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               5016  8 +      6337 a---a------aaaa-----t------a
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26384446  8 +  51448160 a---a------acaa-----t------a
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        9619  8 -     13118 a---a------acaa-----t------a
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   48434  8 -     72089 A---A------AA-----AAT------T
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   302573  8 -   6870073 A---A------AA-----AAT------T
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22956671  8 + 161108492 A---A------AA-----AAT------T
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     418912  8 +    998990 A---A------AA-----AAT------T
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22665325  8 + 158972876 A---A------AA-----AAT------T
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               675262  8 +   1914593 A---A------AA-----AAT------T
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               118237  8 -    171031 a---a------aaaa-----t------a
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 17257  8 +    125063 a---a------aaaa-----t------a
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                19304  8 -    216513 a---a------aaaa-----t------a
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       11847  8 -    134917 a---a------aaaa-----t------a
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3223569  8 -   8989139 A---A------AC-----AAT------A
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           401270  8 -  15254737 A---A------AC-----AAT------A
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2977007  8 +   6889770 A---A------AC-----AAT------A
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11526761  8 +  39901454 A---A------AC-----AAA------T
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   21735  8 +     87036 A---A------AC-----AAA------T
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11273444  8 -  35597290 A---A------AC-----AAA------T
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11096155  8 +  39895921 A---A------AC-----AAA------T
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16462940  8 -  44759192 A---A------AC-----AAA------T
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21333914  8 + 157394656 A---A------AC-----AAT------C
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135712269  8 - 157403528 A---A------AC-----AAT------C
i Capra_hircus.CM004562.1                               C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               62412  8 +     67245 A---G------AC-----TAT------A
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_1326                      420  8 -    202837 A---A------GT-----TAG------A
i Castor_canadensis.CasCan_scaffold_1326                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   163080  7 -    276539 A---A------AC-----AAT-------
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15790113  8 -  24422027 A---A------GC-----AAG------G
i Cavia_aperea.AVPZ01000278.1                           I 2 C 0
s Cavia_porcellus.DS562889.1                             15802052  8 -  24440124 A---A------GC-----AAG------G
i Cavia_porcellus.DS562889.1                            I 2 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       180224  8 +    436027 A---A------GC-----AAG------G
i Cavia_tschudii.CavTsc_scaffold_488                    I 2 C 0
s Cebus_albifrons.Contig22                               18895962  8 -  29618158 a---a------aaaa-----t------a
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                12612  8 -     26817 a---a------aaaa-----t------a
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                16856  8 +     25043 a---a------aaaa-----t------a
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4368015  8 +   7569818 A---A------AC-----AAT------A
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         7772  8 -      9338 A---A------AC-----AAT------A
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6559803  8 +   6739814 a---a------aaaa-----t------a
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      31280  8 +     60454 a---a------aaaa-----t------a
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          6484  8 -     21101 a---a------aaaa-----t------a
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         63794  8 -    107033 a---a------aaaa-----t------a
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_1579766                        2952  9 -      4795 A---A------AA----AAAA------A
i Cercopithecus_ascanius.k141_1579766                   I 3 n 8
s Cercopithecus_cephus.k141_3893260                          3822  8 +     45019 a---a------aaaa-----t------a
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           4098  8 +     15177 a---a------aaaa-----t------a
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          6704  8 +     16677 a---a------aaaa-----t------a
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_1996                              5295  9 -     17229 A---A------AA----AAAA------A
i Cercopithecus_lowei.k141_1996                         I 3 n 8
s Cercopithecus_albogularis.ctg86                                350329  9 +  11364408 A---A------AA----AAAA------A
i Cercopithecus_albogularis.ctg86                             I 3 n 8
s Cercopithecus_mona.ctg12                               46482401  8 +  46592721 a---a------aaaa-----t------a
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_1258634                        760 12 -      1218 A---A------AA-AAAAAAA------A
i Cercopithecus_neglectus.k141_1258634                  I 4 n 8
s Cercopithecus_nictitans.k141_1129315                       6718  8 +     35577 a---a------aaaa-----t------a
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        6512  8 -     25661 a---a------aaaa-----t------a
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_1631406                         703  9 +     11509 A---A------AA----AAAA------A
i Cercopithecus_pogonias.k141_1631406                   C 0 n 0
s Cercopithecus_roloway.k141_550462                         15333  9 +     34041 A---A------AA----AAAA------A
i Cercopithecus_roloway.k141_550462                     I 3 n 8
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           5010  8 -      6963 c---a------aca-----gt------a
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           63609  8 -     68416 a---a------aaaa-----c------a
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                           12729  8 +     13308 a---a------aaaa-----t------a
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             9898  8 -     18223 A---A------AA-----AAT------A
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              1636  8 +    188999 A---A------AA-----AAT------A
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           45935  8 +     57117 A---A------AA-----AAT------A
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          50615  8 +     54541 A---A------AA-----AAT------A
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15964806  8 +  43084221 a---a------acaa-----g------a
i Chinchilla_lanigera.JH721867.1                        I 2 C 0
s Chiropotes_israelita.k141_1189915                         75416  8 +    196370 a---a------aaaa-----t------a
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          19597  8 +     40510 a---a------aaaa-----t------a
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg55                              5018384 11 -  11124196 A---A------AA----AAAAAA----A
i Chlorocebus_aethiops.ctg55                            I 4 n 8
s Chlorocebus_pygerythrus.k141_596994                        4227 11 +     16635 A---A------AA----AAAAAA----A
i Chlorocebus_pygerythrus.k141_596994                   C 0 n 0
s Chlorocebus_sabaeus.CM001963.2                         13528757 11 + 101219884 a---a------aaaaa----a----aaa
i Chlorocebus_sabaeus.CM001963.2                        C 0 N 0
s Choloepus_didactylus.ChoDid_scaffold_36182                19125  8 -     21363 c---a------acaa-----t------g
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           764429  8 +    964067 c---a------acaa-----t------g
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_954668              1346  8 -      1738 G---A------AA-----AAT------A
i Chrysochloris_asiatica.ChrAsi_scaffold_954668         C 0 C 0
s Colobus_angolensis.KN983490.1                            283932  4 +    886210 a---a------aa---------------
i Colobus_angolensis.KN983490.1                         C 0 n 0
s Colobus_guereza.LG08                                   96946821  9 - 156195979 a---a------aaaaa----a------a
i Colobus_guereza.LG08                                  C 0 n 0
s Colobus_polykomos.k141_1178012                               76 12 -     11758 A---A------AA-AAAAAAA------A
i Colobus_polykomos.k141_1178012                        I 3 n 3
s Condylura_cristata.JH655880.1                          60622569  8 +  78930452 A---A------AT-----AAC------A
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         2933 11 -      5782 AGATA------AT-----AAC------T
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 283079  7 -    399297 A---A------AT-----AAC-------
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53035430  7 +  72327488 C---A------AT-----AAC-------
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              2525  8 -     22648 A---A------AC-----AAT------A
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            57915  8 -     70449 a---c------acaa-----t------t
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  214694  8 -    956709 A---A------AC-----AAG------A
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 36357  8 -     67205 A---A------GC-----AAG------A
i Ctenomys_sociabilis.CteSoc_scaffold_19489             I 2 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                21296  8 +     26546 A---A------AC-----AAG------G
i Cuniculus_paca.CunPac_flattened_line_16637            I 2 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             62436  8 -    236241 A---A------AC-----AAG------G
i Dasyprocta_punctata.DasPun_flattened_line_634         I 2 C 0
s Dasypus_novemcinctus.JH568778.1                          186070  8 -   6883506 c---a------acga-----t------a
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16849561  8 +  31942871 g---a------aaaa-----t------a
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80041049  8 -  96802777 a---a------acaa-----t------a
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18701624  8 -  18957592 A---A------AC-----TAT------A
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 326671  8 +    993696 A---A------AC-----AAT------A
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   7303  8 +    151128 A---A------AC-----AAT------A
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   160059  8 +    228994 A---A------GC-----AAG------A
i Dinomys_branickii.DinBra_scaffold_1996                I 1 C 0
s Dipodomys_ordii.KN672545.1                              3660730  8 +   4240102 A---A------TT-----AAG------A
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  3084  8 -     11986 A---A------TT-----AAG------A
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                41010  8 -     73477 A---A------AC-----AAG------G
i Dolichotis_patagonum.DolPat_scaffold_14102            I 2 C 0
s Echinops_telfairi.JH980316.1                           23000337  8 -  44670279 g---a------aaaa-----t------a
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1496650  8 +   1727528 A---A------GC-----AAT------T
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7834591  8 +  15467074 t---a------aaaa-----t------a
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        244244  7 -    369425 a---a------ata-----gc-------
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01076532.1                            575  7 +      9159 a---a------ataa-----c-------
i Ellobius_talpinus.LOJH01076532.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85877885  8 +  99434291 a---a------acaa-----t------t
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4709376  8 +   6522550 A---A------AC-----AAT------A
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5856763  8 -   7175178 g---a------acaa-----t------a
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13355249  8 +  41866177 a---a------acaa-----t------a
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          16739  8 +     92910 a---a------acaa-----t------a
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11541691  8 +  16010500 G---C------AC-----AGT------A
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48781271  8 -  48907691 a---a------aaaa-----t------a
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          319289  8 +    330699 A---A------AC-----AAT------A
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             65746  8 +     89355 A---A------AC-----AAT------A
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              9709  8 +     13586 T---A------AA-----AAT------A
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_1015201                              2968  8 -      4292 T---A------AA-----AAT------A
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            16105  8 +     36558 G---A------AA-----AAT------A
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            12427  8 +     60246 g---a------aaaa-----t------a
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                15912  8 +    109717 t---a------aaaa-----t------a
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 3895  8 -     19505 G---A------AA-----AAT------A
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                20570  8 +     27497 T---A------AA-----TAT------A
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           23026  8 +     26808 G---A------AA-----AAT------A
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                37758  8 +     46535 G---A------AA-----AAT------A
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              20499  8 -     29447 T---A------AA-----AAT------A
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129899356  8 - 159252932 a---a------gcaa-----t------t
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129286331  8 - 158578461 a---a------gcaa-----t------t
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 27430  8 +     52776 a---a------gcaa-----t------t
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13896583  8 -  19261668 a---a------gcaa-----g------g
i Fukomys_damarensis.KN123630.1                         I 2 C 0
s Galago_moholi.ctg555                                     215735  8 -    847004 g---a------aaaa-----t------a
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           18096  8 -     43889 g---a------aaaa-----t------a
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          15240  8 +     27357 g---a------aaaa-----t------a
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               160008  8 +    324696 a---a------aca-----gt------a
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    186427  8 -    189561 A---A------AC-----AAT------T
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           16906  8 -     18683 G---A------AC-----AAG------A
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_2641970                               676  9 +      9263 a---a------aaaa----ga------a
i Gorilla_beringei.k141_2641970                         I 3 n 7
s Gorilla_gorilla.LT578340.1                             52344769  9 + 195582420 a---a------aaaa----ga------a
i Gorilla_gorilla.LT578340.1                            C 0 n 7
s Graphiurus_murinus.GraMur_scaffold_4493                   80221  8 +    118900 g---a------acaa-----g------a
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         6498  8 +     10286 g---a------aaaa-----t------a
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             4976  8 -     11661 g---a------aaaa-----t------a
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                            10303  8 +     56096 g---a------aaaa-----t------a
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        33552  8 -     42470 g---a------aaaa-----t------a
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        50175  8 -     54384 g---a------aaaa-----t------a
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              23053  8 +     53719 a---a------acaa-----t------t
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                33319  8 -     91191 A---A------AC-----AAT------T
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2561075  8 +  31725842 a---a------acaa-----g------a
i Heterocephalus_glaber.JH602058.1                      I 2 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               63299  8 +     73687 g---a------aaaa-----t------g
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              151079  7 +    277961 A---A------AC-----AAT-------
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      283468  8 -    477199 A---A------AC-----AAC------A
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_7653                6018  8 +     86108 A---A------AC-----AAC------A
i Hipposideros_galeritus.HipGal_scaffold_7653           C 0 I 13
s Hoolock_leuconedys.ctg315                                   350693  8 +    431944 A---A------AA-----GAT------A
i Hoolock_leuconedys.ctg315                                I 278 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 23526  8 -     67322 A---C------AC-----AAT------T
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           21671  8 -    119109 A---A------AC-----CGG------G
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       I 2 C 0
s Hylobates_abbotti.k141_1816750                             2173  8 +      3202 A---A------AA-----GAT------A
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1136966                               182  8 +      9785 A---A------AA-----GAT------A
i Hylobates_agilis.k141_1136966                         C 0 C 0
s Hylobates_klossii.k141_468230                              3662  8 +      5464 A---A------AA-----GAT------A
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14629008  8 -  25970782 A---A------AA-----GAT------A
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            1560  8 +      4161 A---A------AA-----GAT------A
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             37116  8 -     60944 A---A------AA-----GAT------A
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     9978  8 +     22540 A---A------AC-----AGG------A
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7130807  8 +  13083262 g---g------atga-----g------a
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   2017  8 +      3484 a---a------aaaa-----t------a
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              13277  8 +     17520 A---A------AC-----AAT------A
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8579413  8 +  11848649 a---a------acaa-----g------a
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               27896  8 +     37189 A---A------AC-----AGT------A
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          54456  9 -    147782 A---A------AA----AAAT------A
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    5971  8 +     26176 A---A------AC-----AAA------A
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258411850  8 - 285822530 g---a------aaaa-----t------a
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        29159  8 +     39228 A---A------AA-----AAT------A
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            58523  8 +     63517 A---A------AA-----AAT------A
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        36903  8 -     38897 A---A------AA-----CAT------A
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      2949  8 -     13103 A---A------AA-----AAT------A
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3091858  8 -   3498232 a---a------gcaa-----t------t
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    21301  8 +     22452 A---A------AC-----AGT------A
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            140211  8 +   3060487 a---a------acaa-----t------a
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19252892  8 +  19376315 a---a------aaaa-----t------a
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           15698  8 +     84689 g---a------aaaa-----t------a
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3783436  8 +   6799190 g---a------aaaa-----t------a
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20599220  8 -  62548349 g---a------aaaa-----t------g
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11095611  8 +  39895028 A---A------AC-----AAA------T
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             24643  8 +     74745 A---A------AA-----AAT------A
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12711104  8 +  12821369 A---A------AA-----AAT------A
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                3677  8 -     26467 A---A------AA-----AAT------A
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           51548  8 +     63263 A---A------AA-----AAT------A
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 3658  8 -     26361 A---A------AA-----AAT------A
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 6848  8 -      7381 A---A------AA-----AAT------A
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_188832                                   5356  9 -     30208 A---A------CA----AAAC------A
i Macaca_maura.k141_188832                              C 0 n 0
s Macaca_mulatta.NC_041755.1                            196040175  8 + 196197964 A---A------AA-----AAT------A
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11450345  8 +  11645122 A---A------AA-----AAT------A
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_2105412                                  4884  9 -     16799 A---A------CA----AAAC------A
i Macaca_nigra.k141_2105412                             C 0 n 0
s Macaca_radiata.k141_3680256                                6694  8 -     13212 A---A------AA-----AAT------A
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 20374  8 -     55006 A---A------AA-----AAT------A
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43845489  8 +  43892939 A---A------AA-----AAT------A
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               21658  8 -     24607 A---A------AA-----AAT------A
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_476106                                3946  9 -     15846 A---A------CA----AAAC------A
i Macaca_tonkeana.k141_476106                           C 0 n 0
s Mandrillus_leucophaeus.scaffold125                     43442064  8 -  43563597 a---a------aaaa-----t------a
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4454868  8 -   4543643 a---a------aaaa-----t------a
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            152583  8 +    252755 A---A------AG-----ATT------C
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             40177  8 +     58827 A---A------AG-----ATT------C
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36878674  8 +  64221397 g---g------atga-----g------a
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       66018 11 -    234502 A---A------AC--GGTGAC------A
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 I 1
s Mellivora_capensis.MelCap_flattened_line_15433             6988  8 -     87323 A---A------AC-----AAT------T
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 1701  7 +    115071 A---A------AA-----AAC-------
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1051952  7 -  26018355 a---a------ataa-----c-------
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    2868  8 -     12939 A---A------AC-----AAT------A
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16514879  9 +  47401472 a--aa------aaaa-----t------a
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  41905  8 -     48017 g---a------aaaa-----t------a
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               25371  8 -     32043 A---A------AC-----TGT------A
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22825041  7 -  98408828 a---a------ataa-----c-------
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8213424  8 +  10048721 A---A------AC-----ACT------A
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            37915  8 +     45743 A---A------AC-----ACT------A
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         6610  8 +     29742 a---a------aaaa-----t------a
i Miopithecus_ogouensis.k141_2935907                    I 3 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        17354  8 -    104932 a---a------gcaa-----t------t
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     5563  8 -     12809 a---a------aaa-----tt------a
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 150642  8 +    154973 a---a------acaa-----t------a
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                163902  4 +    265003 A---A------AC---------------
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 I 3
s Moschus_moschiferus.MosMos_scaffold_78805                  6668  8 -     19904 A---A------AA-----AAT------T
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  150730  8 -    168139 a---a------acaa-----t------t
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          24832  8 -    100666 A---A------AC-----AAT------A
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70772270 13 +  92629107 a---aataaaaataa-----c-------
i Mus_caroli.LT608236.1                                 C 0 I 11
s Mus_musculus.chr16                                     75494324 13 +  98207768 a---aataaaaata-----cc-------
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67561078 13 +  89017189 a---aataaaaataa-----c-------
i Mus_pahari.LT608305.1                                 I 2 C 0
s Mus_spretus.CM004110.1                                 74337050 13 +  97876770 a---aataaaaataa-----c-------
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             15310  8 +     98495 g---g------acaa-----g------a
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4429094  8 -  28371801 a---a------acaa-----t------t
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     96073  8 -    117718 A---T------AT-----AAG------A
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 2 C 0
s Myotis_brandtii.KE161952.1                               971710  8 +   8389877 A---A------AC-----AAT------A
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5023131  8 +   6462685 a---a------acaa-----t------a
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3469215  8 -   3747815 A---A------AC-----AAT------A
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        14456  8 +     66751 a---a------acaa-----t------a
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             8100  8 -      8794 A---A------AC-----AAT------A
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            241053  2 -    362372 a---a-----------------------
i Nannospalax_galili.KL201303.1                         C 0 I 1
s Nasalis_larvatus.k141_1382660                              4266  9 +      5784 a---a------aaaaa----a------a
i Nasalis_larvatus.k141_1382660                         C 0 n 0
s Neomonachus_schauinslandi.NINY01007774.1                4490752  8 -  14209539 a---a------gcaa-----t------t
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3955233  8 -   4490290 a---a------acaa-----t------a
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  50970  8 +     94413 A---A------AC-----TGT------A
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_762468                             679  8 -      2755 a---a------aaaa-----t------a
i Nomascus_annamensis.k141_762468                       C 0 C 0
s Nomascus_concolor.k141_256540                              7291  8 -      8966 a---a------aaaa-----t------a
i Nomascus_concolor.k141_256540                         C 0 C 0
s Nomascus_gabriellae.k141_1400361                           1230  8 -      2203 a---a------aaaa-----t------a
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_453                             6542  8 +     12787 a---a------aaaa-----t------a
i Nomascus_siki_b.tarseq_453                        C 0 C 0
s Nomascus_siki_a.k141_421408                                  1144  8 +     16235 a---a------aaaa-----t------a
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                38476  8 +   3668941 A---A------AC-----AAA------T
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65572361  8 -  95554990 g---a------aaaa-----t------a
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_771591                            15771  8 +     16181 G---A------AA-----AAT------A
i Nycticebus_coucang.k141_771591                        C 0 I 2
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65680549  8 +  89412551 g---a------aaaa-----t------c
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            5000346  2 -  23139505 a---a-----------------------
i Ochotona_princeps.JH802095.1                          C 0 I 2
s Octodon_degus.JH651621.1                                3691413  8 +  10294119 a---a------gcaa-----g------a
i Octodon_degus.JH651621.1                              I 2 C 0
s Odobenus_rosmarus.KB229369.1                             685456  8 -   3126709 a---a------gcaa-----t------t
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1084098  8 +   1425656 A---A------GC-----AAT------T
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         42168  8 +     78940 A---A------AC-----AAT------T
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  130841  7 +    145789 A---A------AT-----AAC-------
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  43534  7 +     62360 A---A------AT-----AAC-------
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7228907  8 -   7562323 a---a------acaa-----t------a
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              64629  8 -     66828 g---a------aaaa-----t------a
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141884318  8 + 163896628 a---a------gca-----gt------A
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      315614  8 -    505867 A---A------AC-----AAA------T
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        5597  8 -     53940 g---a------aaaa-----t------a
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18013566  8 -  38779656 g---a------aaaa-----t------a
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134083105  8 - 275406953 A---A------AC-----AAT------T
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      84339  8 +    140051 A---A------AC-----AAT------T
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.KQ411703.1                                   19502  8 +     41252 a---a------aaaa-----t------a
i Pan_paniscus.KQ411703.1                               I 1 I 253
s Pan_troglodytes.CM009241.2                             52442799 10 + 196562556 a---a------aaaaga---a------a
i Pan_troglodytes.CM009241.2                            I 3 n 7
s Panthera_onca.PanOnc_flattened_line_1615                  40350  8 +    295523 A---A------GC-----AAT------T
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3644165  8 +  18214204 a---a------gcaa-----t------t
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5033813  8 -   6340057 a---a------gcaa-----t------t
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1071976  8 -   1292953 A---A------AC-----AAT------T
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188160853  8 - 188283584 a---a------aaaa-----t------a
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              3943  8 +     25005 a---a------aaaa-----t------a
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47518225  8 +  47705337 a---a------aaaa-----t------a
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 72216  8 -    104429 a---a------aaaa-----t------a
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   10748  8 +     14967 a---a------aaaa-----t------a
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 6613  8 -      7628 a---a------aaaa-----t------a
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    121832  8 -    135482 A---A------AC-----AAT------T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          11261  8 -     23713 g---a------aaaa-----t------a
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           12412  8 +     61070 g---a------aaaa-----t------a
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       2708  8 +     49596 A---A------AT-----CAG------A
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4955898  7 -   8017169 a---a------ataa-----c-------
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              3374  8 +      8220 A---A------AC-----AAT------A
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Piliocolobus_badius.k141_512007                           29791  7 +     37672 a---a------aaa------a------a
i Piliocolobus_badius.k141_512007                       C 0 n 0
s Piliocolobus_gordonorum.k141_736355                       29708  7 +     67079 a---a------aaa------a------a
i Piliocolobus_gordonorum.k141_736355                   C 0 n 0
s Piliocolobus_kirkii.k141_451083                            4872  7 -     13367 A---A------AA------AA------A
i Piliocolobus_kirkii.k141_451083                       C 0 n 0
s Piliocolobus_tephrosceles.PDMG02000342.1                3428473  7 -   4356645 a---a------aaa------a------a
i Piliocolobus_tephrosceles.PDMG02000342.1              C 0 n 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306            99992  8 +    112873 A---A------AC-----AAT------A
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           9852  8 +     21690 A---A------AC-----AAT------A
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       26547  8 +     44506 A---A------AA-----AAT------A
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        26760  8 +     67491 A---A------AA-----AAT------A
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      16999  8 -     98129 A---A------AA-----AAT------A
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     26600  8 +    147771 A---A------AA-----AAT------A
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         3235  8 -     43940 A---A------AA-----AAT------A
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          7318  8 -     55515 A---A------AA-----AAT------A
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         26672  8 +    152463 A---A------AA-----AAT------A
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       4480  8 -    119457 A---A------AA-----AAT------A
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         16394  8 +    134592 A---A------AA-----AAT------A
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          26982  8 -     75465 A---A------AA-----AAT------A
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              191597  8 -    373494 a---a------aaaa-----t------a
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19812244  8 +  19899266 a---a------aaaa-----t------a
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_678168                              10998  9 +     11126 A---A------AA----AAAA------A
i Presbytis_comata.k141_678168                          C 0 n 0
s Presbytis_mitrata.k141_1767317                            10987  9 +     15869 A---A------AA----AAAA------A
i Presbytis_mitrata.k141_1767317                        C 0 n 0
s Procavia_capensis.ProCapCap_scaffold_149274                4405  8 -      9567 G---A------AA-----AAT------G
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6853224  8 +  12164890 g---a------aaaa-----t------a
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     22031  8 -     30946 N---N------NN-----NNN------N
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         8308  8 +     11805 A---A------AA-----AAT------A
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           47642  8 +     52369 A---A------AA-----AAT------A
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         40029  8 -     44753 a---a------aaaa-----t------a
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            21952  8 +     27322 A---A------AA-----AAT------A
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       21601  8 -     53241 A---A------AA-----AAT------A
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         43864  8 -     48185 A---A------AA-----AAT------A
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           38689  7 +     77221 a---a------aaaa-----c-------
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            6552  8 -     27784 A---A------AC-----TAT------A
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        250741  8 -    344369 A---A------AC-----AAT------T
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Puma_concolor.QAVW01000427.1                          131540462  8 - 161321710 a---a------gcaa-----t------t
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_951151                              3024  9 -      8225 a---a------aaaaa----a------a
i Pygathrix_cinerea.k141_951151                         C 0 n 0
s Pygathrix_nigripes_b.ctg25                                14340860  9 -  15297009 a---a------aaaaa----a------a
i Pygathrix_nigripes_b.ctg25                               C 0 n 0
s Pygathrix_nigripes_a.k141_758202                             3041  9 -      8240 a---a------aaaaa----a------a
i Pygathrix_nigripes_a.k141_758202                        C 0 n 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                20963  8 +     68503 A---A------GC-----AAT------T
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13918109 13 +  90463843 a---cataaaaataa-----t-------
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1793047  8 +   2252614 A---A------AC-----AAC------A
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 I 3
s Rhinopithecus_roxellana.NC_044549.1                   152255323 13 - 206558726 a---a------aaaaaaaaaa------a
i Rhinopithecus_roxellana.NC_044549.1                   C 0 N 0
s Rhinopithecus_strykeri.ctg241                            462131  4 +   1472273 a---a------aa---------------
i Rhinopithecus_strykeri.ctg241                         C 0 n 0
s Saiga_tatarica.SaiTat_scaffold_371890                      1374  8 -      4338 A---A------AA-----AAT------T
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15677004  8 -  43202129 A---A------AA-----AAT------A
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        8917  8 +     34089 A---A------AA-----AAT------A
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              8857  8 -     60842 A---A------AA-----AAT------A
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              8951  8 +     67014 A---A------AA-----AAT------A
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              8928  8 +     60816 A---A------AA-----AAT------A
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 8865  8 -     76454 A---A------AA-----AAT------A
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17345650  8 -  30362882 a---a------aaaa-----t------a
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         24971  8 -     62485 a---a------aaaa-----t------a
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   40042  3 -    114521 A---A------A----------------
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1743075                       45569  9 +     45790 A---A------AA----AAAA------A
i Semnopithecus_entellus.k141_1743075                   C 0 n 0
s Semnopithecus_hypoleucos.k141_2141024                      1342  9 -      8815 A---A------AA----AAAA------A
i Semnopithecus_hypoleucos.k141_2141024                 C 0 n 0
s Semnopithecus_johnii.k141_1300894                          1359  9 +     13764 A---A------AA----AAAA------A
i Semnopithecus_johnii.k141_1300894                     C 0 n 0
s Semnopithecus_priam.k141_368201                           10098  9 -     20692 A---A------AA----AAAA------A
i Semnopithecus_priam.k141_368201                       C 0 n 0
s Semnopithecus_schistaceus.k141_628310                     45643  9 -     53123 A---A------AA----AAAA------A
i Semnopithecus_schistaceus.k141_628310                 C 0 n 0
s Semnopithecus_vetulus.k141_748269                          4697  9 +     17284 A---A------AA----AAAA------A
i Semnopithecus_vetulus.k141_748269                     C 0 n 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  105896  7 -    120886 A---A------TT-----AAC-------
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            23998  8 +    739146 A---A------AT-----AAT------A
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17774219  8 -  27805282 A---A------AC-----AAT------A
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2244508  8 +   2842873 t---g------atga-----g------a
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             239531  8 -    276980 a---a------acaa-----t------t
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            33645  8 +     62062 a---a------acaa-----t------t
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        19267  8 -  13920577 A---A------AA-----GAT------A
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                2780  8 +     20549 g---a------acaa-----t------a
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               17773  8 +     45698 A---A------AT-----AAT------A
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      811249  9 +   1148477 A---A------AC----AATT------A
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  61891  9 +     99546 A---A------AC----AATT------A
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194012386  8 - 194193292 a---a------aaaa-----t------a
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                   850  8 -      3104 c---a------acaa-----t------a
i Tolypeutes_matacus.TolMat_scaffold_475685             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  138548  8 -    259118 A---A------AC-----TGT------A
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_672638                         4945  2 +     38635 --------------------A------A
i Trachypithecus_auratus.k141_672638                    I 3 n 3
s Trachypithecus_crepusculus.k141_863597                     4935  9 -     23436 A---A------AA----AAAA------A
i Trachypithecus_crepusculus.k141_863597                C 0 n 0
s Trachypithecus_cristatus.k141_968903                      32587  2 +     43409 --------------------A------A
i Trachypithecus_cristatus.k141_968903                  I 3 n 3
s Trachypithecus_francoisi.k141_1012484                       868  6 +      8809 A---A------AA-------A------A
i Trachypithecus_francoisi.k141_1012484                 C 0 n 0
s Trachypithecus_geei.k141_137495                           30097  9 -     42322 a---a------aaaaa----a------a
i Trachypithecus_geei.k141_137495                       C 0 n 0
s Trachypithecus_germaini.k141_240878                        5065  2 -     24955 --------------------A------A
i Trachypithecus_germaini.k141_240878                   I 3 n 3
s Trachypithecus_hatinhensis.k141_641377                     1233  7 +      1365 A---A------AA------AA------A
i Trachypithecus_hatinhensis.k141_641377                C 0 n 0
s Trachypithecus_laotum.k141_897381                         45637  9 -     53586 A---A------AA----AAAA------A
i Trachypithecus_laotum.k141_897381                     C 0 n 0
s Trachypithecus_leucocephalus.k141_352489                   1208  6 +      9423 A---A------AA-------A------A
i Trachypithecus_leucocephalus.k141_352489              C 0 n 0
s Trachypithecus_melamera.k141_950981                        2223  9 -      3512 A---A------AA----AAAA------A
i Trachypithecus_melamera.k141_950981                   C 0 n 0
s Trachypithecus_obscurus.k141_411399                         125  6 +     12010 ------------A----AAAA------A
i Trachypithecus_obscurus.k141_411399                   n 0 n 0
s Trachypithecus_phayrei.ctg364                            232446  9 -   1198723 a---a------aaaaa----a------a
i Trachypithecus_phayrei.ctg364                         C 0 n 0
s Trachypithecus_pileatus.k141_532233                       30117  9 -     40754 a---a------aaaaa----a------a
i Trachypithecus_pileatus.k141_532233                   C 0 n 0
s Trichechus_manatus.JH594618.1                          16090295  8 +  31416278 g---a------aaaa-----t------a
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2801575  8 -   3938065 A---A------GC-----AAT------G
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                   10398  8 +     13056 A---A------GC-----AAT------A
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69317637  8 -  96451834 a---a------acaa-----t------a
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                     498  8 +    136657 A---A------AT-----AAC------A
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 C 0
s Ursus_maritimus.KK498671.1                              6521164  8 +  28682327 a---a------acaa-----t------t
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  9866  8 -     20643 g---a------aaaa-----t------a
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             29401  8 -     33872 g---a------aaaa-----t------a
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1528677  8 -   2331223 A---A------AC-----AAT------A
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                144841  8 -    281493 A---A------AC-----AAA------T
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       131999  8 -    134049 g---a------atga-----g------a
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        220313  8 -    227762 a---a------gcaa-----t------t
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_202118                     1494  8 -      3360 A---A------AC-----AAA------A
i Zapus_hudsonius.ZapHud_scaffold_202118                C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            2376  8 -     13665 A---A------AC-----AAT------A
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Petromus_typicus.PetTyp_scaffold_33007                    17492  0 -     36578 C
e Tragulus_javanicus.TraJav_scaffold_14717                   9488 743 +     90398 I
e Sus_scrofa.CM000824.4                                 189275422  0 + 218635234 C
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Tarsius_wallacei.k141_48636                               64696  0 +     65473 C
e Tarsius_lariang.k141_609102                               31387  0 +     42269 C
e Rhinopithecus_bieti.k119_554384                            2917  0 -     17045 C
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Cephalopachus_bancanus.k141_702587                        12545  0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530  0 +    345090 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               17997 2 +    209709 AG
s Acinonyx_jubatus.LLWD01000356.1                         2039944 2 +   3721120 ac
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10663904 2 +  23371972 ac
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7100430 2 -  16596857 AC
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_141108                   1682 2 -      7259 AC
i Allactaga_bullata.AllBul_scaffold_141108              C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   5871 2 -     60446 AT
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         6587 2 -     29318 at
i Allochrocebus_lhoesti.k141_3566948                    I 8 C 0
s Allochrocebus_preussi.k141_1108977                         5525 2 +     38766 at
i Allochrocebus_preussi.k141_1108977                    I 8 C 0
s Allochrocebus_solatus.k141_371672                          6481 2 -     80423 at
i Allochrocebus_solatus.k141_371672                     I 8 C 0
s Alouatta_belzebul.k141_276091                              1465 2 +     19852 at
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                3709 2 -     12443 at
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                             1008 2 +      5070 at
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                  753 2 -      1641 at
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          3492 2 -     24210 at
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           30074 2 -     30219 at
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_405616                              5910 2 +     16794 at
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                            1042 2 -      1470 at
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             5187 2 -      9835 at
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3525978 2 +   4113121 AC
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      392997 2 -    631301 AC
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 I 2
s Antilocapra_americana.AntAmePen_scaffold_27338             3410 2 +     55446 AC
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 66797 2 +     78111 at
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            9745 2 +     22701 AT
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5753701 2 +   9889416 at
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                            10300 2 -    104377 at
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                              10307 2 +     23246 at
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     2841 1 +     11424 T-
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 I 137
s Arctocebus_calabarensis.k141_587554                        6896 2 +      9265 ac
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                11406 2 -     29036 AC
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 I 2
s Ateles_geoffroyi_b.tarseq_2582                             9543595 2 +  39197703 at
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             64869 2 +     85812 at
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                15882 2 +     89302 at
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             20383 2 -     58268 at
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             68377 2 +    119057 at
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              10346 2 -     25888 at
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                11408 2 -     16375 ag
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               5024 2 +      6337 ag
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26384454 2 +  51448160 ac
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        9627 2 -     13118 ac
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   48442 2 -     72089 AC
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   302581 2 -   6870073 AC
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22956679 2 + 161108492 AC
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     418920 2 +    998990 AT
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22665333 2 + 158972876 AC
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               675270 2 +   1914593 AC
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               118245 2 -    171031 at
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 17265 2 +    125063 at
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                19312 2 -    216513 at
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       11855 2 -    134917 at
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3223577 2 -   8989139 AC
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           401278 2 -  15254737 AC
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2977015 2 +   6889770 AC
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11526769 2 +  39901454 AC
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   21743 2 +     87036 AC
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11273452 2 -  35597290 AC
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11096163 2 +  39895921 AC
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16462948 2 -  44759192 AC
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21333922 2 + 157394656 AC
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135712277 2 - 157403528 AC
i Capra_hircus.CM004562.1                               C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               62420 2 +     67245 AC
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 I 2
s Castor_canadensis.CasCan_scaffold_1326                      428 2 -    202837 AA
i Castor_canadensis.CasCan_scaffold_1326                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15790121 2 -  24422027 AC
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15802060 2 -  24440124 AC
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       180232 2 +    436027 AC
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18895970 2 -  29618158 at
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                12620 2 -     26817 at
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                16864 2 +     25043 at
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4368023 2 +   7569818 AC
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         7780 2 -      9338 AC
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6559811 2 +   6739814 at
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      31288 2 +     60454 at
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          6492 2 -     21101 at
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         63802 2 -    107033 at
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        6665 2 -     17608 at
i Cercopithecus_ascanius.k141_4123525                   I 8 C 0
s Cercopithecus_cephus.k141_3893260                          3830 2 +     45019 at
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           4106 2 +     15177 at
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          6712 2 +     16677 at
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           28902 2 +     35983 at
i Cercopithecus_lowei.k141_623764                       I 8 C 0
s Cercopithecus_albogularis.ctg51                              11995433 2 +  12117833 at
i Cercopithecus_albogularis.ctg51                             I 8 C 0
s Cercopithecus_mona.ctg12                               46482409 2 +  46592721 at
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                        526 2 -     27215 at
i Cercopithecus_neglectus.k141_2169300                  I 8 C 0
s Cercopithecus_nictitans.k141_1129315                       6726 2 +     35577 at
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        6520 2 -     25661 at
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        6692 2 -     17744 at
i Cercopithecus_pogonias.k141_3109732                   I 42 C 0
s Cercopithecus_roloway.k141_2263608                        26061 2 +     37128 at
i Cercopithecus_roloway.k141_2263608                    I 8 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           5018 2 -      6963 ac
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           63617 2 -     68416 at
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                           12737 2 +     13308 at
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             9906 2 -     18223 CT
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              1644 2 +    188999 CT
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           45943 2 +     57117 CT
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          50623 2 +     54541 CT
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15964814 2 +  43084221 ac
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         75424 2 +    196370 at
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          19605 2 +     40510 at
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15144246 2 -  15256731 at
i Chlorocebus_aethiops.ctg22                            I 8 C 0
s Chlorocebus_pygerythrus.k141_1486215                      38710 2 -     53260 at
i Chlorocebus_pygerythrus.k141_1486215                  I 42 C 0
s Chlorocebus_sabaeus.CM001963.2                        101149269 2 + 101219884 at
i Chlorocebus_sabaeus.CM001963.2                        N 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                19133 2 -     21363 ac
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           764437 2 +    964067 ac
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_954668              1354 2 -      1738 AC
i Chrysochloris_asiatica.ChrAsi_scaffold_954668         C 0 C 0
s Condylura_cristata.JH655880.1                          60622577 2 +  78930452 CC
i Condylura_cristata.JH655880.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              2533 2 -     22648 AC
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            57923 2 -     70449 gc
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  214702 1 -    956709 -C
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 36365 2 -     67205 AT
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                21304 2 +     26546 AC
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             62444 2 -    236241 AC
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          186078 2 -   6883506 at
i Dasypus_novemcinctus.JH568778.1                       C 0 I 2
s Daubentonia_madagascariensis.ctg11                     16849569 2 +  31942871 ac
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80041057 2 -  96802777 ac
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18701632 2 -  18957592 AC
i Desmodus_rotundus.KZ672188.1                          C 0 I 2
s Dicerorhinus_sumatrensis.PEKH010003161.1                 326679 2 +    993696 AC
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   7311 2 +    151128 AC
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   160067 2 +    228994 AC
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3660738 2 +   4240102 ac
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  3092 2 -     11986 AC
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                41018 2 -     73477 AC
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           23000345 2 -  44670279 ac
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1496658 2 +   1727528 AC
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7834599 2 +  15467074 ac
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85877893 2 +  99434291 ac
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4709384 2 +   6522550 AC
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5856771 2 -   7175178 ac
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13355257 2 +  41866177 ac
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          16747 2 +     92910 ac
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11541699 2 +  16010500 AT
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48781279 2 -  48907691 at
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          319297 2 +    330699 AC
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             65754 2 +     89355 AC
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              9717 2 +     13586 AC
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_1015201                              2976 2 -      4292 AC
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            16113 2 +     36558 AC
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            12435 2 +     60246 ac
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                15920 2 +    109717 ac
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 3903 2 -     19505 AC
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                20578 2 +     27497 AC
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           23034 2 +     26808 AC
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                37766 2 +     46535 AC
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              20507 2 -     29447 AC
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129899364 2 - 159252932 ac
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129286339 2 - 158578461 ac
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 27438 2 +     52776 ac
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13896591 2 -  19261668 aC
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     215743 2 -    847004 ac
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           18104 2 -     43889 ac
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          15248 2 +     27357 ac
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               160016 2 +    324696 ac
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    186435 2 -    189561 AG
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           16914 2 -     18683 AC
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               9695 2 -     14630 AT
i Gorilla_beringei.k141_111300                          I 7 C 0
s Gorilla_gorilla.LT578340.1                            119656795 2 - 195582420 at
i Gorilla_gorilla.LT578340.1                            I 7 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   80229 2 +    118900 ac
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         6506 2 +     10286 ac
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             4984 2 -     11661 ac
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                            10311 2 +     56096 ac
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        33560 2 -     42470 ac
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        50183 2 -     54384 ac
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              23061 2 +     53719 gc
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                33327 2 -     91191 AC
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2561083 2 +  31725842 ac
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               63307 2 +     73687 ac
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              151086 2 +    277961 AC
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hoolock_leuconedys.ctg315                                   350701 2 +    431944 AT
i Hoolock_leuconedys.ctg315                                C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 23534 2 -     67322 AC
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           21679 2 -    119109 GC
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_1816750                             2181 2 +      3202 AT
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1136966                               190 2 +      9785 AT
i Hylobates_agilis.k141_1136966                         C 0 C 0
s Hylobates_klossii.k141_468230                              3670 2 +      5464 AT
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14629016 2 -  25970782 AT
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            1568 2 +      4161 AT
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             37124 2 -     60944 AT
i Hylobates_pileatus_a.tarseq_592                         C 0 I 3
s Hystrix_cristata.HysCri_scaffold_50788                     9986 2 +     22540 TC
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7130815 2 +  13083262 ac
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   2025 2 +      3484 ag
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              13285 2 +     17520 AC
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8579421 2 +  11848649 ac
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               27904 2 +     37189 AC
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          54465 2 -    147782 AT
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    5979 2 +     26176 AC
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258411858 2 - 285822530 at
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        29167 2 +     39228 AT
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            58531 2 +     63517 AT
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        36911 2 -     38897 AT
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      2957 2 -     13103 AT
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3091866 2 -   3498232 gc
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    21309 2 +     22452 AC
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            140219 2 +   3060487 ac
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19252900 2 +  19376315 at
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           15706 2 +     84689 at
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3783444 2 +   6799190 at
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20599228 2 -  62548349 gc
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11095619 2 +  39895028 AC
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             24651 2 +     74745 GT
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12711112 2 +  12821369 GT
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                3685 2 -     26467 GT
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           51556 2 +     63263 GT
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 3666 2 -     26361 GT
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 6856 2 -      7381 GT
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_mulatta.NC_041755.1                            196040183 2 + 196197964 GT
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11450353 2 +  11645122 GT
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_radiata.k141_3680256                                6702 2 -     13212 GT
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 20382 2 -     55006 GT
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43845497 2 +  43892939 GT
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               21666 2 -     24607 GT
i Macaca_thibetana.k99_662710                           C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43442072 2 -  43563597 at
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4454876 2 -   4543643 at
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            152591 2 +    252755 AC
i Manis_javanica.JSZB01003966.1                         C 0 I 1
s Manis_pentadactyla.KN017078.1                             40185 2 +     58827 AC
i Manis_pentadactyla.KN017078.1                         C 0 I 1
s Marmota_marmota.CZRN01000005.1                         36878682 2 +  64221397 ac
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             6996 2 -     87323 CC
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    2876 2 -     12939 AC
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16514888 2 +  47401472 at
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  41913 2 -     48017 aa
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               25379 2 -     32043 AC
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 I 2
s Miniopterus_natalensis.LDJU01000022.1                   8213432 2 +  10048721 AC
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            37923 2 +     45743 AC
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         6618 2 +     29742 at
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        17362 2 -    104932 gc
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     5571 2 -     12809 at
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 150650 2 +    154973 ac
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  6676 2 -     19904 AT
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  150738 2 -    168139 gc
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          24840 2 -    100666 AC
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             15318 2 +     98495 ac
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4429102 2 -  28371801 ac
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     96081 2 -    117718 AC
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               971718 2 +   8389877 AC
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5023139 2 +   6462685 ac
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3469223 2 -   3747815 AC
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        14464 2 +     66751 gc
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             8108 2 -      8794 AC
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4490760 2 -  14209539 gc
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3955241 2 -   4490290 ac
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  50978 2 +     94413 AT
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 I 2
s Nomascus_annamensis.k141_762468                             687 2 -      2755 at
i Nomascus_annamensis.k141_762468                       C 0 C 0
s Nomascus_concolor.k141_256540                              7299 2 -      8966 at
i Nomascus_concolor.k141_256540                         C 0 C 0
s Nomascus_gabriellae.k141_1400361                           1238 2 -      2203 at
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_453                             6550 2 +     12787 at
i Nomascus_siki_b.tarseq_453                        C 0 C 0
s Nomascus_siki_a.k141_421408                                  1152 2 +     16235 at
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                38484 2 +   3668941 AC
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65572369 2 -  95554990 at
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_6040852                               6 2 +      1868 aa
i Nycticebus_coucang.k141_6040852                       n 2 I 84
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65680557 2 +  89412551 at
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            5000350 2 -  23139505 aC
i Ochotona_princeps.JH802095.1                          I 2 C 0
s Octodon_degus.JH651621.1                                3691421 2 +  10294119 aC
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             685464 2 -   3126709 gc
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1084106 2 +   1425656 AC
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         42176 2 +     78940 AG
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Orcinus_orca.KB316965.1                                 7228915 2 -   7562323 ac
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              64637 2 -     66828 ac
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141884326 2 + 163896628 AC
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      315622 2 -    505867 AC
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        5605 2 -     53940 ac
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18013574 2 -  38779656 ac
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134083113 2 - 275406953 AC
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      84347 2 +    140051 AC
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127578974 2 - 205426864 at
i Pan_paniscus.CM003386.1                               I 7 C 0
s Pan_troglodytes.CM009241.2                            120156134 2 - 196562556 at
i Pan_troglodytes.CM009241.2                            I 7 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  40358 2 +    295523 AC
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3644173 2 +  18214204 ac
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5033821 2 -   6340057 ac
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1071984 2 -   1292953 AC
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188160861 2 - 188283584 at
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              3951 2 +     25005 at
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47518233 2 +  47705337 at
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 72224 2 -    104429 at
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   10756 2 +     14967 at
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 6621 2 -      7628 at
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    121840 2 -    135482 AC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          11269 2 -     23713 ac
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           12420 2 +     61070 ac
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       2716 2 +     49596 AA
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              3382 2 +      8220 AC
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306           100000 2 +    112873 AC
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           9860 2 +     21690 AC
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       26555 2 +     44506 CT
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        26768 2 +     67491 CT
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      17007 2 -     98129 CT
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     26608 2 +    147771 CT
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         3243 2 -     43940 CT
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          7326 2 -     55515 CT
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         26680 2 +    152463 CT
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       4488 2 -    119457 CT
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         16402 2 +    134592 CT
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          26990 2 -     75465 CT
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              191605 2 -    373494 at
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19812252 2 +  19899266 at
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                4413 2 -      9567 AC
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6853232 2 +  12164890 ac
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     22039 2 -     30946 NN
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         8316 2 +     11805 AG
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           47650 2 +     52369 AG
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         40037 2 -     44753 ag
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            21960 2 +     27322 AG
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       21609 2 -     53241 AG
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         43872 2 -     48185 AG
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Pteronotus_parnellii.KE867983.1                            6560 2 -     27784 AC
i Pteronotus_parnellii.KE867983.1                       C 0 I 1
s Pteronura_brasiliensis.PteBra_flattened_line_1343        250749 2 -    344369 AC
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Puma_concolor.QAVW01000427.1                          131540470 2 - 161321710 ac
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                20971 2 +     68503 AC
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                      1382 2 -      4338 AT
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15677012 2 -  43202129 CT
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        8925 2 +     34089 CT
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              8865 2 -     60842 CT
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              8959 2 +     67014 CT
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              8936 2 +     60816 CT
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 8873 2 -     76454 CT
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17345658 2 -  30362882 at
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         24979 2 -     62485 at
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            24006 2 +    739146 AG
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17774227 2 -  27805282 Cc
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2244516 2 +   2842873 ac
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             239539 2 -    276980 ac
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            33653 2 +     62062 gc
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        19275 2 -  13920577 AT
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                2788 2 +     20549 ac
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               17781 2 +     45698 AC
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      811258 2 +   1148477 AC
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  61900 2 +     99546 AC
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194012394 2 - 194193292 at
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                   858 2 -      3104 ac
i Tolypeutes_matacus.TolMat_scaffold_475685             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  138556 2 -    259118 AC
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 I 2
s Trichechus_manatus.JH594618.1                          16090303 2 +  31416278 ac
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2801583 2 -   3938065 CC
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                   10406 2 +     13056 CC
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69317645 2 -  96451834 ac
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                     506 2 +    136657 AC
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 C 0
s Ursus_maritimus.KK498671.1                              6521172 2 +  28682327 ac
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  9874 2 -     20643 ac
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             29409 2 -     33872 ac
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1528685 2 -   2331223 AC
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                144849 2 -    281493 AC
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       132007 2 -    134049 ac
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        220321 2 -    227762 gc
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_202118                     1502 2 -      3360 AC
i Zapus_hudsonius.ZapHud_scaffold_202118                C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            2384 2 -     13665 AC
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Petromus_typicus.PetTyp_scaffold_33007                    17492 0 -     36578 C
e Tragulus_javanicus.TraJav_scaffold_14717                   9488 743 +     90398 I
e Sus_scrofa.CM000824.4                                 189275422 0 + 218635234 C
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   40045 0 -    114521 C
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Rhinolophus_sinicus.LVEH01000179.1                      1793055 3 +   2252614 I
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Mormoops_blainvillei.MorMeg_scaffold_2952                163906 3 +    265003 I
e Megaderma_lyra.MegLyr_scaffold_3562                       66029 1 -    234502 I
e Hipposideros_galeritus.HipGal_scaffold_7653                6026 13 +     86108 I
e Hipposideros_armiger.JXIK01001085.1                      283476 0 -    477199 C
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         2944 0 -      5782 C
e Catagonus_wagneri.CatWag_scaffold_1305                   163087 0 -    276539 C
e Microtus_ochrogaster.CM001673.1                        22825048 0 -  98408828 C
e Trachypithecus_pileatus.k141_532233                       30126 0 -     40754 I
e Trachypithecus_phayrei.ctg364                            232455 0 -   1198723 I
e Trachypithecus_obscurus.k141_411399                         131 0 +     12010 I
e Trachypithecus_melamera.k141_950981                        2232 0 -      3512 I
e Trachypithecus_leucocephalus.k141_352489                   1214 0 +      9423 I
e Trachypithecus_laotum.k141_897381                         45646 0 -     53586 I
e Trachypithecus_hatinhensis.k141_641377                     1240 0 +      1365 I
e Trachypithecus_germaini.k141_240878                        5067 3 -     24955 I
e Trachypithecus_geei.k141_137495                           30106 0 -     42322 I
e Trachypithecus_francoisi.k141_1012484                       874 0 +      8809 I
e Trachypithecus_cristatus.k141_968903                      32589 3 +     43409 I
e Trachypithecus_crepusculus.k141_863597                     4944 0 -     23436 I
e Trachypithecus_auratus.k141_672638                         4947 3 +     38635 I
e Tarsius_wallacei.k141_48636                               64696 0 +     65473 C
e Tarsius_lariang.k141_609102                               31387 0 +     42269 C
e Sigmodon_hispidus.SigHis_scaffold_11332                  105903 0 -    120886 C
e Semnopithecus_vetulus.k141_748269                          4706 0 +     17284 I
e Semnopithecus_schistaceus.k141_628310                     45652 0 -     53123 I
e Semnopithecus_priam.k141_368201                           10107 0 -     20692 I
e Semnopithecus_johnii.k141_1300894                          1368 0 +     13764 I
e Semnopithecus_hypoleucos.k141_2141024                      1351 0 -      8815 I
e Semnopithecus_entellus.k141_1743075                       45578 0 +     45790 I
e Rhinopithecus_strykeri.ctg241                            462135 0 +   1472273 I
e Rhinopithecus_bieti.k119_554384                            2917 0 -     17045 C
e Rattus_norvegicus.chr11                                13918122 0 +  90463843 C
e Pygathrix_nigripes_a.k141_758202                             3050 0 -      8240 I
e Pygathrix_nigripes_b.ctg25                                14340869 0 -  15297009 I
e Pygathrix_cinerea.k141_951151                              3033 0 -      8225 I
e Psammomys_obesus.NESX01026517.1                           38696 0 +     77221 C
e Presbytis_mitrata.k141_1767317                            10996 0 +     15869 I
e Presbytis_comata.k141_678168                              11007 0 +     11126 I
e Pithecia_vanzolinii.k141_831006                           15424 0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514 0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521 0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292 0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093 0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038 0 +     78826 C
e Pithecia_albicans.k141_991845                             45662 0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000342.1                3428480 0 -   4356645 I
e Piliocolobus_kirkii.k141_451083                            4879 0 -     13367 I
e Piliocolobus_gordonorum.k141_736355                       29715 0 +     67079 I
e Piliocolobus_badius.k141_512007                           29798 0 +     37672 I
e Peromyscus_maniculatus.KI615518.1                       4955905 0 -   8017169 C
e Onychomys_torridus.OnyTor_scaffold_12578                  43541 0 +     62360 C
e Ondatra_zibethicus.OndZib_scaffold_6821                  130848 0 +    145789 C
e Nasalis_larvatus.k141_1382660                              4275 0 +      5784 I
e Nannospalax_galili.KL201303.1                            241055 1 -    362372 I
e Mus_spretus.CM004110.1                                 74337063 0 +  97876770 C
e Mus_pahari.LT608305.1                                  67561091 0 +  89017189 C
e Mus_musculus.chr16                                     75494337 0 +  98207768 C
e Mus_caroli.LT608236.1                                  70772283 11 +  92629107 I
e Mesocricetus_auratus.KB708139.1                         1051959 0 -  26018355 C
e Meriones_unguiculatus.MerUng_scaffold_9483                 1708 0 +    115071 C
e Macaca_tonkeana.k141_476106                                3955 0 -     15846 I
e Macaca_nigra.k141_2105412                                  4893 0 -     16799 I
e Macaca_maura.k141_188832                                   5365 0 -     30208 I
e Ellobius_talpinus.LOJH01076532.1                            582 0 +      9159 C
e Ellobius_lutescens.LOEQ01003611.1                        244251 0 -    369425 C
e Cricetulus_griseus.LT883672.1                          53035437 0 +  72327488 C
e Cricetomys_gambianus.CriGam_scaffold_949                 283086 0 -    399297 C
e Colobus_polykomos.k141_1178012                               88 3 -     11758 I
e Colobus_guereza.LG08                                   96946830 0 - 156195979 I
e Colobus_angolensis.KN983490.1                            283936 0 +    886210 I
e Cephalopachus_bancanus.k141_702587                        12545 0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530 0 +    345090 C
e Acomys_cahirinus.AcoCah_scaffold_1625                    118310 0 -    189883 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               17999 14 +    209709 ACT--AATT--------GAA-A-G--AA
s Acinonyx_jubatus.LLWD01000356.1                         2039946 14 +   3721120 att--agtt---------ggaa-a--aa
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    118310 11 -    189883 ------ACT-T------GAA-A-A--AA
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 I 1
s Ailuropoda_melanoleuca.LNAT01000321.1                  10663906 14 +  23371972 att--actt---------ggaa-a--ca
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7100432 14 -  16596857 ATT--AGTT---------GGAA-A--CT
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_141108                   1684 14 -      7259 ATT--AATT--------GGA-A-G--AA
i Allactaga_bullata.AllBul_scaffold_141108              C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   5873 14 -     60446 ACT--AATT--------GAA-A-G--AA
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         6589 14 -     29318 act--aatt--------gaa-a-g--aa
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         5527 14 +     38766 act--aatt--------gaa-a-g--aa
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          6483 14 -     80423 act--aatt--------gaa-a-g--aa
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              1467 14 +     19852 act--aatt--------gga-a-g--aa
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                3711 14 -     12443 act--aatt--------gga-a-g--aa
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                             1010 14 +      5070 act--aatt--------gga-a-g--aa
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                  755 14 -      1641 act--aatt--------gga-a-g--aa
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          3494 14 -     24210 act--aatt--------gga-a-g--aa
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           30076 14 -     30219 act--aatt--------gga-a-g--aa
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_405616                              5912 14 +     16794 act--aatt--------gga-a-g--aa
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                            1044 14 -      1470 act--aatt--------gga-a-g--aa
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             5189 14 -      9835 act--aatt--------gga-a-g--aa
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3525980 13 +   4113121 ACT--AATT---------GGAA-A--A-
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      393001 10 -    631301 ------ACG---------GGGG-A--AA
i Anoura_caudifer.AnoCau_scaffold_422                   I 2 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             3412 13 +     55446 CCT--AATT---------GGAA-A--A-
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 66799 14 +     78111 act--aatt--------gga-a-g--aa
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            9747 14 +     22701 TCT--AATT--------GGA-A-G--AA
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5753703 14 +   9889416 act--aatt--------ggA-A-G--AA
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                            10302 14 -    104377 act--aatt--------gga-a-g--aa
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                              10309 14 +     23246 act--aatt--------gga-a-g--aa
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     2979 14 +     11424 AAT--AATT--------GGA-A-G--AA
i Aplodontia_rufa.AprRuf_scaffold_101456                I 137 I 1
s Arctocebus_calabarensis.k141_587554                        6898 12 +      9265 att--aatt--------gga-a-g----
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                11410 10 -     29036 ------AGG---------AGGA-A--AA
i Artibeus_jamaicensis.ArtJam_scaffold_41619            I 2 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9543597 13 +  39197703 act--aatt---------ga-a-g--aa
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             64871 13 +     85812 act--aatt---------ga-a-g--aa
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                15884 13 +     89302 act--aatt---------ga-a-g--aa
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             20385 13 -     58268 act--aatt---------ga-a-g--aa
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             68379 13 +    119057 act--aatt---------ga-a-g--aa
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              10348 13 -     25888 act--aatt---------ga-a-g--aa
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                11410 14 -     16375 att--aatt--------gga-a-g--aa
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               5026 14 +      6337 att--aatt--------gga-a-g--aa
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26384456 14 +  51448160 act--aatt---------ggaa-a--aa
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        9629 14 -     13118 act--aatt---------ggaa-a--aa
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   48444 13 -     72089 ACT--AAGT---------GGAA-A--A-
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   302583 13 -   6870073 GCT--AATT---------GGAA-A--A-
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22956681 13 + 161108492 GCT--AATT---------GGAA-A--A-
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     418922 13 +    998990 GCT--AATT---------GGAA-A--A-
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22665335 13 + 158972876 GCT--AATT---------GGAA-A--A-
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               675272 13 +   1914593 GCT--AATT---------GGAA-A--A-
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               118247 14 -    171031 act--aatt--------gga-a-g--aa
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 17267 14 +    125063 act--aatt--------gga-a-g--aa
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                19314 14 -    216513 act--aatt--------gga-a-g--aa
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       11857 14 -    134917 act--aatt--------gga-a-g--aa
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3223579 13 -   8989139 ACT--AAAT---------GG-A-A--AG
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           401280 13 -  15254737 ACT--AAAT---------GG-A-A--AG
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2977017 13 +   6889770 ACT--AAAT---------GG-A-A--AG
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11526771 14 +  39901454 ATT--AGTT---------AGAA-A--AA
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   21745 14 +     87036 ATT--AGTT---------AGAA-A--AA
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11273454 14 -  35597290 ATT--AGTT---------AGAA-A--AA
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11096165 14 +  39895921 ATT--AGTT---------AGAA-A--AA
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16462950 14 -  44759192 ATT--AGTT---------AGAA-A--AA
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21333924 13 + 157394656 ACT--AATT---------GGAA-A--A-
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135712279 13 - 157403528 ACT--AATT---------GGAA-A--A-
i Capra_hircus.CM004562.1                               C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               62424 10 +     67245 ------ATG---------AGGA-A--AA
i Carollia_perspicillata.CarPer_scaffold_4436           I 2 C 0
s Castor_canadensis.CasCan_scaffold_1326                      430 11 -    202837 ATT--AATT--------GGA-A------
i Castor_canadensis.CasCan_scaffold_1326                C 0 I 2
s Catagonus_wagneri.CatWag_scaffold_1305                   163087 13 -    276539 ACT--AATT---------G-AA-A--AA
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15790123 14 -  24422027 ATT--AACT--------GGA-A-G--AA
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15802062 14 -  24440124 ATT--AACT--------GGA-A-G--AA
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       180234 14 +    436027 ATT--AACT--------GGA-A-G--AA
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18895972 14 -  29618158 act--aatt--------gga-a-g--aa
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                12622 14 -     26817 act--aatt--------gga-a-g--aa
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                16866 14 +     25043 act--aatt--------gga-a-g--aa
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4368025 14 +   7569818 ACT--AATT---------GGAA-A--AA
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         7782 14 -      9338 ACT--AATT---------GGAA-A--AA
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6559813 14 +   6739814 act--aatt--------gaa-a-g--aa
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      31290 14 +     60454 act--aatt--------gaa-a-g--aa
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          6494 14 -     21101 act--aatt--------gaa-a-g--aa
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         63804 14 -    107033 act--aatt--------gaa-a-g--aa
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        6667 14 -     17608 act--aatt--------gaa-a-g--aa
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          3832 14 +     45019 act--aatt--------gaa-a-g--aa
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           4108 14 +     15177 act--aatt--------gaa-a-g--aa
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          6714 14 +     16677 act--aatt--------gaa-a-g--aa
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           28904 14 +     35983 act--aatt--------gaa-a-g--aa
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11995435 14 +  12117833 act--aatt--------gaa-a-g--aa
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46482411 14 +  46592721 act--aatt--------gaa-a-g--aa
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                        528 14 -     27215 act--aatt--------gaa-a-g--aa
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       6728 14 +     35577 act--aatt--------gaa-a-g--aa
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        6522 14 -     25661 act--aatt--------gaa-a-g--aa
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        6694 14 -     17744 act--aatt--------gaa-a-g--aa
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        26063 14 +     37128 act--aatt--------gaa-a-g--aa
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           5020 14 -      6963 act--aatt--------tga-a-g--ga
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           63619 14 -     68416 att--aaat--------gga-a-g--aa
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                           12739 14 +     13308 att--aatt--------gga-a-g--aa
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             9908 14 -     18223 ACT--AATT--------GGA-A-G--AA
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              1646 14 +    188999 ACT--AATT--------GGA-A-G--AA
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           45945 14 +     57117 ACT--AATT--------GGA-A-G--AA
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          50625 14 +     54541 ACT--AATT--------GGA-A-G--AA
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15964816 14 +  43084221 att--AGTT--------GAG-A-G--GA
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         75426 14 +    196370 act--aatt--------gga-a-g--aa
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          19607 14 +     40510 act--aatt--------gga-a-g--aa
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15144248 14 -  15256731 act--aact--------gaa-a-g--aa
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      38712 14 -     53260 act--aact--------gaa-a-g--aa
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101149271 14 + 101219884 act--aatt--------gaa-a-g--aa
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                19135 14 -     21363 aGT--AATT--------TGA-A-A--AT
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           764439 14 +    964067 agt--aatt--------tga-a-a--at
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_954668              1356 14 -      1738 ACT--AATT--------TGA-A-G--GC
i Chrysochloris_asiatica.ChrAsi_scaffold_954668         C 0 C 0
s Condylura_cristata.JH655880.1                          60622579 15 +  78930452 ATT--Aact---------ga-a-agcaa
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         2944 13 -      5782 --CTA-ATT---------GGAA-A--AA
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 283086 11 -    399297 ------ACT-T------GAA-A-A--AT
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53035437  9 +  72327488 ------ACA-------CAAA-C-A----
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              2535 13 -     22648 ACT--AATG---------GA-A-A--TA
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            57925 14 -     70449 att--agtt---------ggaa-a--aa
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  214703 14 -    956709 TTT--AACT--------GAA-A-G--AA
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 36367 14 -     67205 ATT--AACC--------AGA-A-G--GA
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                21306 14 +     26546 ATT--AATT--------GGA-A-G--AA
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             62446 14 -    236241 ATT--AATT--------GGA-A-G--AA
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          186082 11 -   6883506 -----AATT--------TGA-A-G--AA
i Dasypus_novemcinctus.JH568778.1                       I 2 C 0
s Daubentonia_madagascariensis.ctg11                     16849571 14 +  31942871 att--aatt--------gga-a-g--aa
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80041059 14 -  96802777 act--aatt---------ggaa-a--aa
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18701636 10 -  18957592 ------ATG---------GGGG-A--AA
i Desmodus_rotundus.KZ672188.1                          I 2 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 326681 14 +    993696 ACT--AATT---------GGAA-A--AA
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   7313 14 +    151128 ACT--AATT---------GGAA-A--AA
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   160069 14 +    228994 ATT--AATT--------GGG-A-G--AA
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3660740 14 +   4240102 att--aatt--------aga-a-a--aa
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  3094 14 -     11986 ATT--AATT--------AGA-A-A--AA
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                41020 14 -     73477 ATT--AATT--------GGA-A-G--AA
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           23000347 14 -  44670279 act--aatt--------tga-a-g--aa
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1496660 13 +   1727528 GCT--AATT---------GGAA-A--G-
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7834601 14 +  15467074 acg--aATT--------TGA-A-A--AC
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        244251 11 -    369425 ------acA-T------GAA-A-A--AA
i Ellobius_lutescens.LOEQ01003611.1                     C 0 I 6
s Ellobius_talpinus.LOJH01076532.1                            582 11 +      9159 ------act-------tGAA-A-A--AA
i Ellobius_talpinus.LOJH01076532.1                      C 0 I 6
s Enhydra_lutris.KZ291749.1                              85877895 14 +  99434291 att--agct---------ggaa-a--ca
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4709386 21 +   6522550 ACT--AATTGTAAATT--GTAA-A--AA
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5856773 14 -   7175178 act--aatt---------ggaa-a--aa
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13355259 14 +  41866177 act--aatt---------ggaa-a--aa
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          16749 14 +     92910 act--aatt---------ggaa-a--aa
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11541701 14 +  16010500 ACT--AACT---------GGGA-A--AG
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48781281 14 -  48907691 act--aatt--------gaa-a-g--aa
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          319299 14 +    330699 ACT--AATT---------GGAA-A--AA
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             65756 14 +     89355 ACT--AATT---------GGAA-A--AA
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              9719 14 +     13586 ATT--AATT--------GAA-A-G--AA
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_1015201                              2978 14 -      4292 ATT--AATT--------GAA-A-G--AA
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            16115 14 +     36558 ATT--AATT--------GAA-A-G--AA
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            12437 14 +     60246 gtt--aatt--------gaa-a-g--aa
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                15922 14 +    109717 att--aatt--------caa-a-g--aa
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 3905 14 -     19505 GTT--AATT--------GAA-A-G--AA
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                20580 14 +     27497 ATT--AATT--------GAA-A-G--AA
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           23036 14 +     26808 GTT--AATT--------GAA-A-G--AA
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                37768 14 +     46535 GTT--AATT--------GAA-A-G--AA
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              20509 14 -     29447 ATT--AATT--------GAA-A-G--AA
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129899366 14 - 159252932 att--agtt---------ggaa-a--aa
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129286341 14 - 158578461 att--agtt---------ggaa-a--aa
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 27440 14 +     52776 att--agtt---------ggaa-a--aa
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13896593 14 -  19261668 ATT--AACT--------GGA-A-G--AG
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     215745 12 -    847004 att--aact--------gga-a-g----
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           18106 12 -     43889 att--aact--------gga-a-g----
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          15250 12 +     27357 att--aatt--------tga-a-g----
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               160018 14 +    324696 att--aatg--------caa-a-g--aa
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    186437 13 -    189561 GCT--AATT---------GGAA-A--A-
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           16916 14 -     18683 ACT--AATT--------GGA-A-G--AA
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               9697 14 -     14630 ACT--AATT--------GAA-A-G--AA
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119656797 14 - 195582420 act--aatt--------gaa-a-g--aa
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   80231 14 +    118900 aTT--AATT--------GCA-A-G--AC
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         6508 14 +     10286 att--aatt--------gaa-a-g--aa
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             4986 14 -     11661 att--aatt--------gaa-a-g--aa
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                            10313 14 +     56096 att--aatt--------gaa-a-g--aa
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        33562 14 -     42470 att--aatt--------gaa-a-g--aa
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        50185 14 -     54384 att--aatt--------gaa-a-g--aa
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              23063 14 +     53719 att--agtt---------ggaa-a--aa
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                33329 13 -     91191 ACT--AATT---------GGAA-A--A-
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2561085 14 +  31725842 gTT--AAGT--------GAA-A-G--AA
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               63309 14 +     73687 tct--aatt--------taa-a-a--aa
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              151088 14 +    277961 ACT--AATT---------GGAA-A--AA
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      283476 13 -    477199 --CTA-ATC---------GGAA-C--AA
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959               1244 13 +     26078 --CTA-ATT---------GGAA-C--AA
i Hipposideros_galeritus.HipGal_scaffold_52959          I 21 I 28
s Hoolock_leuconedys.ctg315                                   350703 14 +    431944 ACT--AATT--------GAA-A-G--AA
i Hoolock_leuconedys.ctg315                                C 0 I 485
s Hyaena_hyaena.HyaHya_flattened_line_20729                 23536 14 -     67322 ATT--AGTT---------GGAA-A--AA
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           21681 14 -    119109 ATT--AATT--------GGA-A-G--AA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_1816750                             2183 14 +      3202 ACT--AATT--------GAA-A-G--AA
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1136966                               192 14 +      9785 ACT--AATT--------GAA-A-G--AA
i Hylobates_agilis.k141_1136966                         C 0 C 0
s Hylobates_klossii.k141_468230                              3672 14 +      5464 ACT--AATT--------GAA-A-G--AA
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14629018 14 -  25970782 ACT--AATT--------GAA-A-G--AA
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            1570 14 +      4161 ACT--AATT--------GAA-A-G--AA
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             37129 11 -     60944 -----AATT--------GAA-A-G--AA
i Hylobates_pileatus_a.tarseq_592                         I 3 C 0
s Hystrix_cristata.HysCri_scaffold_50788                     9988 14 +     22540 ATT--AATT--------GGA-A-G--AA
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7130817 14 +  13083262 aTt--aatt--------gaa-a-g--aa
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 I 1
s Indri_indri.k141_2197838                                   2027 14 +      3484 att--aatt--------gga-a-g--aa
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              13287 14 +     17520 ACT--AATT---------GGAA-A--AA
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8579423 14 +  11848649 att--aaTT--------GGA-A-G--GA
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               27906 14 +     37189 ACT--AATT---------GGAA-A--AA
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          54467 14 -    147782 ACT--AATT--------GGA-A-G--AA
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    5981 21 +     26176 ACT--AATTGTAAATT--GTAA-A--AA
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258411860 14 - 285822530 att--aatt--------gaa-a-g--aa
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        29169 14 +     39228 ATT--AGTT--------GGA-A-G--AA
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            58533 14 +     63517 ATT--AGTT--------GGA-A-G--AA
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        36913 14 -     38897 ATT--AGTT--------GGA-A-G--AA
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      2959 14 -     13103 ATT--AATT--------GGA-A-G--AA
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3091868 14 -   3498232 att--agtt---------ggaa-a--ca
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    21311 14 +     22452 ATG--AATT--------GAA-A-C--AG
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            140221 14 +   3060487 act--aatt---------ggaa-a--aa
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19252902 14 +  19376315 act--aatt--------gaa-a-g--aa
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           15708 12 +     84689 att--aatt--------gga-a-g----
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3783446 12 +   6799190 att--aatt--------gga-a-g----
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20599230 14 -  62548349 act--aact--------tga-g-g--aa
i Loxodonta_africana.GL010040.1                         C 0 I 4
s Lycaon_pictus.CM007556.1                               11095621 14 +  39895028 ATT--AGTT---------AGAA-A--AA
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             24653 14 +     74745 ACT--AATT--------GAA-C-G--AG
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12711114 14 +  12821369 ACT--AATT--------GAA-C-G--AG
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                3687 14 -     26467 ACT--AATT--------GAA-C-G--AG
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           51558 14 +     63263 ACT--AATT--------GAA-C-G--AG
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 3668 14 -     26361 ACT--AATT--------GAA-C-G--AG
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 6858 14 -      7381 ACT--AATT--------GAA-C-G--AG
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  50093  8 -     79256 --------T--------GAA-C-G--AG
i Macaca_maura.k141_251854                              I 50 C 0
s Macaca_mulatta.NC_041755.1                            196040185 14 + 196197964 ACT--AATT--------GAA-C-G--AG
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11450355 14 +  11645122 ACT--AATT--------GAA-C-G--AG
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   9047  8 -     46448 --------T--------GAA-C-G--AG
i Macaca_nigra.k141_282495                              I 50 C 0
s Macaca_radiata.k141_3680256                                6704 14 -     13212 ACT--AATT--------GAA-C-G--AG
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 20384 14 -     55006 ACT--AATT--------GAA-C-G--AG
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43845499 14 +  43892939 ACT--AATT--------GAA-C-G--AG
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               21668 14 -     24607 ACT--AATT--------GAA-C-G--AG
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               9044  8 -     27140 --------T--------GAA-C-G--AG
i Macaca_tonkeana.k141_2870633                          I 50 C 0
s Mandrillus_leucophaeus.scaffold125                     43442074 14 -  43563597 act--aatt--------gaa-a-g--aa
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4454878 14 -   4543643 act--aatt--------gaa-a-g--aa
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            152594 11 +    252755 -----AGTT---------GGAA-A--AG
i Manis_javanica.JSZB01003966.1                         I 1 C 0
s Manis_pentadactyla.KN017078.1                             40188 11 +     58827 -----AGTT---------GGAA-A--AG
i Manis_pentadactyla.KN017078.1                         I 1 C 0
s Marmota_marmota.CZRN01000005.1                         36878684 14 +  64221397 att--aatt--------gaa-a-g--aa
i Marmota_marmota.CZRN01000005.1                        C 0 I 1
s Megaderma_lyra.MegLyr_scaffold_3562                       66030 13 -    234502 --CCA-TTG---------GGAA-A--AA
i Megaderma_lyra.MegLyr_scaffold_3562                   I 1 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             6998 14 -     87323 ATT--AGCT---------GGAA-A--CA
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 1708 11 +    115071 ------ACT-T------GAA-A-A--AA
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 I 1
s Mesocricetus_auratus.KB708139.1                         1051959 11 -  26018355 ------acA-T------GAA-A-A--AC
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    2878 14 -     12939 ACT--AATT---------GGAA-A--AA
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16514890 14 +  47401472 att--aatt--------aga-a-G--AA
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  41915 14 -     48017 act--aatt--------tga-a-g--ga
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               25383 11 -     32043 ------ATG---------GGGA-A-AAA
i Micronycteris_hirsuta.MicHir_scaffold_37978           I 2 C 0
s Microtus_ochrogaster.CM001673.1                        22825048 12 -  98408828 ------act-------tgaa-aaa--aa
i Microtus_ochrogaster.CM001673.1                       C 0 I 6
s Miniopterus_natalensis.LDJU01000022.1                   8213434 14 +  10048721 AGT--AACT---------GGAA-A--AA
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            37925 14 +     45743 ACT--AACT---------GGAA-A--AA
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         6620 14 +     29742 act--aatt--------gaa-a-g--aa
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        17364 14 -    104932 att--agtt---------ggaa-a--ca
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     5573 14 -     12809 att--aatt--------gga-a-g--aa
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 150652 14 +    154973 act--aatt---------ggaa-a--aa
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                163909 10 +    265003 ------ATG---------GGGA-A--GA
i Mormoops_blainvillei.MorMeg_scaffold_2952             I 3 I 4
s Moschus_moschiferus.MosMos_scaffold_78805                  6678 13 -     19904 GCT--AATT---------GGAA-A--A-
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  150740 14 -    168139 act--agtt---------ggaa-a--aa
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          24842 21 -    100666 ACT--AATTGTAAATT--GTAA-A--AA
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.FMAL02028947.1                                   190 11 -      2058 ------att-------tgga-a-a--aa
i Mus_caroli.FMAL02028947.1                             I 17 n 11
s Mus_musculus.chr16                                     75494337 11 +  98207768 ------acT-T------GGA-A-A--AC
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67561091 11 +  89017189 ------act-------tgGA-A-A--AC
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74337063 11 +  97876770 ------act-------tgGA-A-A--AC
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             15320 14 +     98495 att--aagt--------gta-a-g--aa
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4429104 14 -  28371801 att--agct---------ggaa-a--ca
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     96083 14 -    117718 ATT--CACT--------GAA-A-G--GA
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               971720 21 +   8389877 ACT--AATTGTAAATTG--TAA-A--AA
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5023141 14 +   6462685 act--aatt-------g--taa-a--aa
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3469225 21 -   3747815 ACT--AATTGTAAATTG--TAA-A--AA
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        14466 14 +     66751 act--aatt-------g--taa-a--aa
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             8110 13 -      8794 AGT--TATT--------TGA-A-T--A-
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            241056 10 -    362372 ------acc--------gga-g-a--ga
i Nannospalax_galili.KL201303.1                         I 1 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4490762 14 -  14209539 att--agtt---------ggaa-a--ca
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3955243 14 -   4490290 act--aatt---------ggaa-a--aa
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  50982  9 +     94413 ------ATG---------G-GA-A--AA
i Noctilio_leporinus.NocLep_scaffold_12062              I 2 C 0
s Nomascus_annamensis.k141_762468                             689 14 -      2755 act--aatt--------gaa-a-g--aa
i Nomascus_annamensis.k141_762468                       C 0 C 0
s Nomascus_concolor.k141_256540                              7301 14 -      8966 act--aatt--------gaa-a-g--aa
i Nomascus_concolor.k141_256540                         C 0 C 0
s Nomascus_gabriellae.k141_1400361                           1240 14 -      2203 act--aatt--------gaa-a-g--aa
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_453                             6552 14 +     12787 act--aatt--------gaa-a-g--aa
i Nomascus_siki_b.tarseq_453                        C 0 C 0
s Nomascus_siki_a.k141_421408                                  1154 14 +     16235 act--aatt--------gaa-a-g--aa
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                38486 14 +   3668941 ATT--AGTT---------AGAA-A--AA
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65572371 12 -  95554990 att--attt--------gga-a-g----
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_771591                            15781 12 +     16181 ATT--ATTT--------GGA-A-G----
i Nycticebus_coucang.k141_771591                        I 2 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65680559 12 +  89412551 att--attt--------gga-a-g----
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            5000352 14 -  23139505 ATT--GATT--------GAA-A-C--AT
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3691423 14 +  10294119 ATT--AACT--------GGA-A-G--GA
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             685466 14 -   3126709 att--agtt---------ggaa-a--ca
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1084108 13 +   1425656 GCT--AATT---------GGAA-A--G-
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         42178  9 +     78940 GCT--AATT---------GG--------
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 I 3
s Ondatra_zibethicus.OndZib_scaffold_6821                  130848 11 +    145789 ------ACT-T------GAA-A-A--AA
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 I 6
s Onychomys_torridus.OnyTor_scaffold_12578                  43541 12 +     62360 ------ATT-T------GAA-AAA--AA
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 I 189
s Orcinus_orca.KB316965.1                                 7228917 14 -   7562323 act--aatt---------ggaa-a--aa
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              64639 14 -     66828 act--aatt--------tga-a-a--aa
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141884328 14 + 163896628 ATG--AATT--------GAA-A-C--AG
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      315624 14 -    505867 ATT--AGTT---------AGAA-A--AA
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        5607 12 -     53940 att--aatt--------gga-a-g----
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18013576 12 -  38779656 att--aatt--------gGA-A-G----
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134083115 13 - 275406953 ACT--AATT---------GGAA-A--A-
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      84349 13 +    140051 ACT--AATT---------GGAA-A--A-
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127578976 14 - 205426864 act--aatt--------gaa-a-g--aa
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120156136 14 - 196562556 act--aatt--------gaa-a-g--aa
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  40360 14 +    295523 ATT--AGTT---------GGAA-A--AA
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3644175 14 +  18214204 att--agtt---------ggaa-a--aa
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5033823 14 -   6340057 att--agtt---------ggaa-a--aa
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1071986 13 -   1292953 ACT--AACT---------GGAA-A--A-
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188160863 14 - 188283584 act--aatt--------gaa-a-g--aa
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              3953 14 +     25005 act--aatt--------gaa-a-g--aa
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47518235 14 +  47705337 act--aatt--------gaa-a-g--aa
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 72226 14 -    104429 act--aatt--------gaa-a-g--aa
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   10758 14 +     14967 act--aatt--------gaa-a-g--aa
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 6623 14 -      7628 act--aatt--------gaa-a-g--aa
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    121842 14 -    135482 ATT--AGTT---------GAAA-A--AA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          11271 12 -     23713 att--aatt--------gga-a-g----
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           12422 12 +     61070 att--aatt--------gga-a-g----
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       2718 11 +     49596 ATT--AATT--------AGA-A------
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 I 2
s Peromyscus_maniculatus.KI615518.1                       4955905 12 -   8017169 ------act-------tgaa-aaa--aa
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              3384 14 +      8220 ACT--AATT---------GGAA-A--AA
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306           100002 21 +    112873 ACT--AATTGTAAATT--GTAA-A--AA
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           9862 14 +     21690 ACT--AATT---------GGAA-A--AA
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       26557 14 +     44506 ACT--AATT--------GGA-A-G--AA
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        26770 14 +     67491 ACT--AATT--------GGA-A-G--AA
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      17009 14 -     98129 ACT--AATT--------GGA-A-G--AA
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     26610 14 +    147771 ACT--AATT--------GGA-A-G--AA
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         3245 14 -     43940 ACT--AATT--------GGA-A-G--AA
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          7328 14 -     55515 ACT--AATT--------GGA-A-G--AA
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         26682 14 +    152463 ACT--AATT--------GGA-A-G--AA
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       4490 14 -    119457 ACT--AATT--------GGA-A-G--AA
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         16404 14 +    134592 ACT--AATT--------GGA-A-G--AA
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          26992 14 -     75465 ACT--AATT--------GGA-A-G--AA
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              191607 14 -    373494 act--aatt--------gaa-a-g--aa
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19812254 14 +  19899266 act--aatt--------gaa-a-g--aa
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                4415 14 -      9567 TCT--AATT--------TAA-A-A--AA
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6853234 14 +  12164890 att--aatt--------gaa-A-G--AA
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     22041 14 -     30946 NNN--NNNN--------NNN-N-N--NN
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         8318 14 +     11805 ATT--AATT--------GGA-A-G--AA
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           47652 14 +     52369 ATT--AATT--------GGA-A-G--AA
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         40039 14 -     44753 att--aatt--------gga-a-g--aa
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            21962 14 +     27322 ATT--AATT--------GGA-A-G--AA
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       21611 14 -     53241 ATT--AATT--------GGA-A-G--AA
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         43874 14 -     48185 ATT--AATT--------GGA-A-G--AA
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           38696 11 +     77221 ------act-------tgaa-a-g--aC
i Psammomys_obesus.NESX01026517.1                       C 0 I 1
s Pteronotus_parnellii.KE867983.1                            6563 10 -     27784 ------ATG---------GGAA-A--AA
i Pteronotus_parnellii.KE867983.1                       I 1 I 4
s Pteronura_brasiliensis.PteBra_flattened_line_1343        250751 14 -    344369 ACT--AGCT---------GGAA-A--CC
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Puma_concolor.QAVW01000427.1                          131540472 14 - 161321710 att--agtt---------ggaa-a--aa
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                20973 13 +     68503 ATT--AATT---------GGAA-A--G-
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13918122 11 +  90463843 ------gtt-------tgaa-a-a--ag
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1793058  6 +   2252614 -------------------GAA-A--AA
i Rhinolophus_sinicus.LVEH01000179.1                    I 3 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                      1384 13 -      4338 GCT--AAGT---------GGAA-A--A-
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15677014 14 -  43202129 ACT--AATT--------GGA-A-G--AA
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        8927 14 +     34089 ACT--AATT--------GGA-A-G--AA
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              8867 14 -     60842 ACT--AATT--------GGA-A-G--AA
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              8961 14 +     67014 ACT--AATT--------GGA-A-G--AA
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              8938 14 +     60816 ACT--AATT--------GGA-A-G--AA
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 8875 14 -     76454 ACT--AATT--------GGA-A-G--AA
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17345660 14 -  30362882 act--aatt--------gga-a-g--aa
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         24981 14 -     62485 act--aatt--------gga-a-g--aa
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   40045  8 -    114521 ------ACT---------GA-A-A---A
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  105903 10 -    120886 ------ACT-T------AAA-A-A--A-
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            24008 13 +    739146 AAT--AACT---------AA-A-A--AA
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17774229 13 -  27805282 att--aata---------aa-a-a--ca
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2244518 14 +   2842873 att--aatt--------gaa-a-g--aa
i Spermophilus_dauricus.KZ294190.1                      C 0 I 1
s Spilogale_gracilis.SpiGra_flattened_line_905             239541 14 -    276980 att--agtt---------ggaa-a--ca
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            33655 14 +     62062 att--agtt---------ggaa-a--aa
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189275422  9 + 218635234 -------TT---------AGAA-A--AA
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        19277 14 -  13920577 ACT--AATT--------GAA-A-G--AA
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                2790 14 +     20549 att--aact---------ggga-a--aa
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               17783 13 +     45698 AGT--TATT--------TGA-A-T--A-
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      811260 14 +   1148477 ACT--AATT---------GGAA-A--AG
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  61902 14 +     99546 ACT--AATT---------GGAA-A--AG
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194012396 14 - 194193292 act--aatt--------gaa-a-g--aa
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                   860 14 -      3104 act--aatt--------tga-a-g--ga
i Tolypeutes_matacus.TolMat_scaffold_475685             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  138560  9 -    259118 ------ATG---------TGGA-A--A-
i Tonatia_saurophila.TonSau_scaffold_3334               I 2 C 0
s Trichechus_manatus.JH594618.1                          16090305 14 +  31416278 act--aatt--------tga-a-g--aa
i Trichechus_manatus.JH594618.1                         C 0 I 5
s Tupaia_chinensis.KB320831.1                             2801585 14 -   3938065 ATT--AATT--------TGA-A-G--GA
i Tupaia_chinensis.KB320831.1                           C 0 I 4
s Tupaia_tana.TupTan_flattened_line_68454                   10408 14 +     13056 ATT--AATT--------TGA-A-G--GA
i Tupaia_tana.TupTan_flattened_line_68454               C 0 I 4
s Tursiops_truncatus.MRVK01000923.1                      69317647 14 -  96451834 act--aatt---------ggaa-a--aa
i Tursiops_truncatus.MRVK01000923.1                     C 0 I 6
s Uropsilus_gracilis.UroGra_scaffold_4115                     508 13 +    136657 ACT--AACT---------GA-A-A--AA
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 C 0
s Ursus_maritimus.KK498671.1                              6521174 14 +  28682327 att--actt---------ggaa-a--ca
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  9876 14 -     20643 att--aatt--------gaa-a-g--ac
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             29411 14 -     33872 att--aatt--------gaa-a-g--ac
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1528687 13 -   2331223 ACT--AAAT---------GG-A-A--AG
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                144851 14 -    281493 ATT--AGTT---------AGAA-A--AA
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       132009 14 -    134049 att--aatt--------gga-a-g--aa
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        220323 14 -    227762 att--agtt---------ggaa-a--ca
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_202118                     1504 14 -      3360 ATT--AATT--------GGA-A-G--AA
i Zapus_hudsonius.ZapHud_scaffold_202118                C 0 I 9
s Ziphius_cavirostris.ZipCav_flattened_line_60625            2386 14 -     13665 ACT--AATT---------GTAA-A--AA
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Petromus_typicus.PetTyp_scaffold_33007                    17492  0 -     36578 C
e Tragulus_javanicus.TraJav_scaffold_14717                   9488 743 +     90398 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Trachypithecus_pileatus.k141_532233                       30126  0 -     40754 I
e Trachypithecus_phayrei.ctg364                            232455  0 -   1198723 I
e Trachypithecus_obscurus.k141_411399                         131  0 +     12010 I
e Trachypithecus_melamera.k141_950981                        2232  0 -      3512 I
e Trachypithecus_leucocephalus.k141_352489                   1214  0 +      9423 I
e Trachypithecus_laotum.k141_897381                         45646  0 -     53586 I
e Trachypithecus_hatinhensis.k141_641377                     1240  0 +      1365 I
e Trachypithecus_germaini.k141_240878                        5067  3 -     24955 I
e Trachypithecus_geei.k141_137495                           30106  0 -     42322 I
e Trachypithecus_francoisi.k141_1012484                       874  0 +      8809 I
e Trachypithecus_cristatus.k141_968903                      32589  3 +     43409 I
e Trachypithecus_crepusculus.k141_863597                     4944  0 -     23436 I
e Trachypithecus_auratus.k141_672638                         4947  3 +     38635 I
e Tarsius_wallacei.k141_48636                               64696  0 +     65473 C
e Tarsius_lariang.k141_609102                               31387  0 +     42269 C
e Semnopithecus_vetulus.k141_748269                          4706  0 +     17284 I
e Semnopithecus_schistaceus.k141_628310                     45652  0 -     53123 I
e Semnopithecus_priam.k141_368201                           10107  0 -     20692 I
e Semnopithecus_johnii.k141_1300894                          1368  0 +     13764 I
e Semnopithecus_hypoleucos.k141_2141024                      1351  0 -      8815 I
e Semnopithecus_entellus.k141_1743075                       45578  0 +     45790 I
e Rhinopithecus_strykeri.ctg241                            462135  0 +   1472273 I
e Rhinopithecus_bieti.k119_554384                            2917  0 -     17045 C
e Pygathrix_nigripes_a.k141_758202                             3050  0 -      8240 I
e Pygathrix_nigripes_b.ctg25                                14340869  0 -  15297009 I
e Pygathrix_cinerea.k141_951151                              3033  0 -      8225 I
e Presbytis_mitrata.k141_1767317                            10996  0 +     15869 I
e Presbytis_comata.k141_678168                              11007  0 +     11126 I
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000342.1                3428480  0 -   4356645 I
e Piliocolobus_kirkii.k141_451083                            4879  0 -     13367 I
e Piliocolobus_gordonorum.k141_736355                       29715  0 +     67079 I
e Piliocolobus_badius.k141_512007                           29798  0 +     37672 I
e Nasalis_larvatus.k141_1382660                              4275  0 +      5784 I
e Colobus_polykomos.k141_1178012                               88  3 -     11758 I
e Colobus_guereza.LG08                                   96946830  0 - 156195979 I
e Colobus_angolensis.KN983490.1                            283936  0 +    886210 I
e Cephalopachus_bancanus.k141_702587                        12545  0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530  0 +    345090 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               18013 18 +    209709 CAAAT-GTGATA-A-----------TG--AGA----A
s Acinonyx_jubatus.LLWD01000356.1                         2039960 20 +   3721120 tgagc-gtgata-a-----------at--aga--aga
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    118322 11 -    189883 --------AGTA-G-----------TT--AAG----A
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 1 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10663920 20 +  23371972 tgagt-ctgata-a-----------tT--AGAA--GA
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7100446 20 -  16596857 TGAGT-GTGATA-A-----------TT--AGAAA--A
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_141108                   1698 18 -      7259 TCAGA-ACAAAA-A-----------TT--AAG----A
i Allactaga_bullata.AllBul_scaffold_141108              C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   5887 18 -     60446 TGAAT-GTGATA-A-----------TG--AGA----A
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         6603 18 -     29318 tgaat-gtgata-a-----------tg--aga----a
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         5541 18 +     38766 tgaat-gtgata-a-----------tg--aga----a
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          6497 18 -     80423 tgaat-gtgata-a-----------tg--aga----a
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              1481 18 +     19852 tgatt-gtgata-a-----------tt--gga----a
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                3725 18 -     12443 tgatt-gtgata-a-----------tt--gga----a
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                             1024 18 +      5070 tgatt-gtgata-a-----------tt--gga----a
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                  769 18 -      1641 tgatt-gtgata-a-----------tt--gga----a
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          3508 18 -     24210 tgatt-gtgata-a-----------tt--gga----a
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           30090 18 -     30219 tgatt-gtgata-a-----------tt--gga----a
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_405616                              5926 18 +     16794 tgatt-gtgata-a-----------tt--gga----a
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                            1058 18 -      1470 tgatt-gtgata-a-----------tt--gga----a
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             5203 18 -      9835 tgatt-gtgata-a-----------tt--gga----a
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3525993 19 +   4113121 -GAGT-ttgtta-a-----------tt--aaa--aga
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      393011 20 -    631301 TGAGT-GTGATA-A-----------TT--AAAA--GA
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             3425 19 +     55446 -GAGT-TTGTTA-A-----------TT--AAAA--GA
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 66813 18 +     78111 tgatt-ctgata-a-----------tg--aca----a
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            9761 18 +     22701 TGATT-GTGATA-A-----------TG--ACA----A
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5753717 18 +   9889416 TGATT-CTGATA-A-----------TG--ACA----A
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                            10316 18 -    104377 tgatt-gtgata-a-----------tg--aca----a
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                              10323 18 +     23246 tgatt-gtgata-a-----------tg--aca----a
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     2994  8 +     11424 -----------A-A-----------TT--AAA----A
i Aplodontia_rufa.AprRuf_scaffold_101456                I 1 I 1
s Arctocebus_calabarensis.k141_587554                        6910 14 +      9265 ----t-ctaaga-a-----------tt--aaa----a
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                11420 20 -     29036 TGAGT-GTGATA-A-----------TT--AAAA--GA
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9543610 18 +  39197703 ttatt-gtgata-a-----------tc--gga----a
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             64884 18 +     85812 ttatt-gtgata-a-----------tc--gga----a
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                15897 18 +     89302 ttatt-gtgata-a-----------tc--aga----a
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             20398 18 -     58268 ttatt-gtgata-a-----------tc--gga----a
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             68392 18 +    119057 ttatt-gtgata-a-----------tc--gga----a
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              10361 18 -     25888 ttatt-gtgata-a-----------tc--gga----a
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                11424 18 -     16375 taagt-gtgata-g-----------tt--aaa----a
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               5040 18 +      6337 taagt-gtgata-g-----------tt--aaa----a
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26384470 20 +  51448160 tgagc-atgata-a-----------tt--aaa--aga
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        9643 20 -     13118 tgagc-atgata-a-----------tt--aaa--aga
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   48457 19 -     72089 -GAGT-TTGTTA-A-----------TT--AAAA--GA
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   302596 19 -   6870073 -GAgt-ttatta-a-----------tt--aaa--aga
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22956694 19 + 161108492 -GAgt-ttatta-a-----------tt--aaa--aga
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     418935 19 +    998990 -GAgt-ttatta-a-----------tt--aaa--aga
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22665348 19 + 158972876 -GAgt-ttatta-a-----------tt--aaa--aga
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               675285 19 +   1914593 -GAGT-ttgtta-a-----------tt--aaa--aga
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               118261 18 -    171031 tgatt-gtgata-a-----------tg--aga----a
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 17281 18 +    125063 tgatt-gtgata-a-----------tg--aga----a
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                19328 18 -    216513 tgatt-gtgata-a-----------tg--aga----a
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       11871 18 -    134917 tgatt-gtgata-a-----------tg--aga----a
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3223592 18 -   8989139 TGAGt-gtgata-a-----------tt--aaa----a
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           401293 18 -  15254737 TGAGt-gtgata-a-----------tt--aaa----a
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2977030 18 +   6889770 TGAGt-gtgata-a-----------tt--aaa----a
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11526785 20 +  39901454 TGAGT-GTGATA-A-----------TT--AGAAA--A
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   21759 20 +     87036 TGAGT-GTGATA-A-----------TT--AGAAA--A
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11273468 20 -  35597290 TGAGT-gtgata-a-----------tt--aga--aaa
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11096179 20 +  39895921 TGAGT-gtgata-a-----------tt--aga--aaa
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16462964 20 -  44759192 TGAGT-gtgata-a-----------tt--aga--aaa
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21333937 19 + 157394656 -GAGT-ttgtta-a-----------tt--aaa--aga
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135712292 19 - 157403528 -GAGT-ttgtta-a-----------tt--aaa--aga
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_780116                     0 12 +      1571 -------TATAA-A-----------TT--AGA----A
i Capromys_pilorides.CapPil_scaffold_780116             N 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               62434 20 +     67245 CAAGT-GTAATA-A-----------TT--AAAA--GA
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_1326                      443 18 -    202837 TAGGT-ATAATA-A-----------TT--TTA----A
i Castor_canadensis.CasCan_scaffold_1326                I 2 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   163100 18 -    276539 TGACT-GTGGCA-C-----------TT--TAA----A
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15790137 18 -  24422027 TGAAT-GCAACA-A-----------AT--AAA----A
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15802076 18 -  24440124 TGAAT-GCaaca-a-----------at--aaa----a
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       180248 18 +    436027 TGAAT-GCAACA-A-----------AT--AAA----A
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18895986 18 -  29618158 tgatt-gtgatt-a-----------tg--aga----a
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                12636 18 -     26817 tgatt-gtgatt-a-----------tg--aga----a
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                16880 18 +     25043 tgatt-gtgatt-a-----------tg--aga----a
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4368039 20 +   7569818 TAAGT-gtgata-a-----------tt--aaa--aga
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         7796 20 -      9338 TAAGT-GTGATA-A-----------TT--AAAA--GA
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6559827 18 +   6739814 tgaat-gtgata-a-----------tg--aga----a
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      31304 18 +     60454 tgaat-gtgata-a-----------tg--aga----a
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          6508 18 -     21101 tgaat-gtgata-a-----------tg--aga----a
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         63818 18 -    107033 tgaat-gtgata-a-----------tg--aga----a
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        6681 18 -     17608 tgaat-gtgata-a-----------tg--aga----a
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          3846 18 +     45019 tgaat-gtgata-a-----------gg--aga----a
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           4122 18 +     15177 tgaat-gtgata-a-----------tg--aga----a
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          6728 18 +     16677 tgaat-gtgata-a-----------tg--aga----a
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           28918 18 +     35983 tgaat-gtgata-a-----------tg--aga----a
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11995449 18 +  12117833 tgaat-gtgata-a-----------tg--aga----a
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46482425 18 +  46592721 tgaat-gtgata-a-----------tg--aga----a
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                        542 18 -     27215 tgaat-gtgata-a-----------tg--aga----a
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       6742 18 +     35577 tgaat-gtgata-a-----------tg--aga----a
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        6536 18 -     25661 tgaat-gtgata-a-----------gg--aga----a
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        6708 18 -     17744 tgaat-gtgata-a-----------tg--aga----a
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        26077 18 +     37128 tgaat-gtgata-a-----------tg--aga----a
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           5034 11 -      6963 caagt-gtgagg-------------------------
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 I 7
s Cheirogaleus_major.k141_1157592                           63633 18 -     68416 taggt-gtgata-a-----------tt--aaa----a
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                           12753 18 +     13308 taagt-gtgata-a-----------tt--aaa----a
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             9922 18 -     18223 TGATT-GTGATA-A-----------TG--AGA----A
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              1660 18 +    188999 TGATT-GTGATA-A-----------TG--AGA----A
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           45959 18 +     57117 TGATT-GTGATA-A-----------TG--AGA----A
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          50639 18 +     54541 TGATT-GTGATA-A-----------TG--AGA----A
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15964830 18 +  43084221 TGAAT-GCAATA-A-----------TT--AAA----A
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         75440 18 +    196370 tgatt-gtgata-a-----------tg--aga----a
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          19621 18 +     40510 tgatt-gtgata-a-----------tg--aga----a
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15144262 18 -  15256731 tgaat-gtgata-a-----------tg--aga----a
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      38726 18 -     53260 tgaat-gtgata-a-----------tg--aga----a
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101149285 18 + 101219884 tgaat-gtgaTA-A-----------TG--AGA----A
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                19149 26 -     21363 TGAGT-GTGAGA-AAATTC-T--TCTT--TAA----A
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           764453 26 +    964067 tgagt-gtgaga-a---aattcttctt--taa----a
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_954668              1370 18 -      1738 AGAAA-GTGAGA-A-----------TT--AAA----A
i Chrysochloris_asiatica.ChrAsi_scaffold_954668         C 0 C 0
s Condylura_cristata.JH655880.1                          60622594  4 +  78930452 --aat-a------------------------------
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         2957 20 -      5782 TGAGT-CTGATC-A-----------TT--AAAA--TA
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 283097 19 -    399297 TAAGTCTTAATA-G-----------TT--AAA----A
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53035446 19 +  72327488 TAAGTCTTAATA-A-----------GT--AAA----A
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              2548 17 -     22648 TAAAC-AGGGTA-T-----------TT--GAA-----
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            57939 20 -     70449 tgagt-gtgata-a-----------GT--AGAA--GA
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  214717 18 -    956709 TGAGT-GTAATA-A-----------TT--AAA----A
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 36381 18 -     67205 TGAAT-GTAGTA-A-----------TT--CAA----A
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                21320 18 +     26546 TGAAA-GCAATA-A-----------AT--AAA----A
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             62460 18 -    236241 TGAAT-GTAGTG-A-----------AT--AAA----A
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          186093 18 -   6883506 C-AGT-Gtgagaaa-----------tt--aca----a
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16849585 18 +  31942871 taaat-gtaatc-a-----------tt--aaa----a
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80041073 20 -  96802777 tgagt-atgata-a-----------tt--aaa--aga
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18701646 20 -  18957592 TGAGT-gggata-a-----------tt--aaa--aga
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 326695 20 +    993696 TAAGT-gttata-a-----------tt--aaa--aga
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   7327 20 +    151128 TAAGT-GTGATA-A-----------TT--AAAA--GA
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   160083 18 +    228994 TGAAT-GCAATA-A-----------TT--AAA----A
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3660754 12 +   4240102 taagt-gTATTA-A-----------------------
i Dipodomys_ordii.KN672545.1                            C 0 I 8
s Dipodomys_stephensi.DipSte_scaffold_84338                  3108 28 -     11986 TAAGT-GTATTA-AAAGACATGGTATT--AAA-----
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                41034 18 -     73477 TGAAT-GCAATA-A-----------AT--AAA----A
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           23000361 18 -  44670279 agagt-gtgagg-a-----------tt--aaa----a
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1496673 19 +   1727528 -GAGT-ttgtta-a-----------tt--aaa--aga
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7834615 18 +  15467074 TGAGC-Attaga-a-----------tt--aaa----a
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        244268 10 -    369425 --------AATA-G-----------TT---AA----A
i Ellobius_lutescens.LOEQ01003611.1                     I 6 C 0
s Ellobius_talpinus.LOJH01076532.1                            599 10 +      9159 --------AATA-G-----------TT---AA----A
i Ellobius_talpinus.LOJH01076532.1                      I 6 C 0
s Enhydra_lutris.KZ291749.1                              85877909 20 +  99434291 tgagt-gtgata-a-----------tT--AGAA--GA
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4709407 19 +   6522550 TGAgt-gtgata-a-----------tt---ta--aaa
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5856787 20 -   7175178 taagt-gtgata-a-----------tt--aaa--gga
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13355273 20 +  41866177 taagt-gtgata-a-----------tt--aaa--gga
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          16763 20 +     92910 taagt-gtgata-a-----------tt--aaa--gga
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11541715 19 +  16010500 TGAGC-AAGATA-A-----------TTACGGT-----
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48781295 18 -  48907691 tgaat-gtgatg-a-----------tg--aga----a
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          319313 20 +    330699 TGAGT-ATGATA-A-----------TT--AAAA--GA
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             65770 20 +     89355 TGAGT-ATGATA-A-----------TT--AAAA--GA
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              9733 18 +     13586 TAACT-GTGATA-G-----------TT--AAA----A
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_1015201                              2992 18 -      4292 TAATT-GTGATA-G-----------TT--AAA----A
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            16129 18 +     36558 TAACT-GTGATA-G-----------TT--AAA----A
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            12451 18 +     60246 taact-gtgata-g-----------tt--aaa----a
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                15936 18 +    109717 taatt-gtgata-g-----------tt--aaa----a
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 3919 18 -     19505 TAACT-GTGATA-G-----------TT--AAA----A
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                20594 18 +     27497 TAACT-GTGATA-G-----------TT--AAA----A
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           23050 18 +     26808 TAACT-GTGATA-G-----------TT--AAA----A
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                37782 18 +     46535 TAACT-GTGATA-G-----------TT--AAA----A
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              20523 18 -     29447 TAATT-GTGATA-G-----------TT--AAA----A
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129899380 20 - 159252932 tgagt-gtgata-a-----------AT--AGAA--GA
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129286355 20 - 158578461 tgagt-gtgata-a-----------AT--AGAA--GA
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 27454 20 +     52776 tgagt-gtgata-a-----------AT--AGAA--GA
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13896607 17 -  19261668 TGAGT-GCAATA-A-----------TT--A-A----A
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     215757 14 -    847004 ----t-gtgata-a-----------tt--aaa----a
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           18118 14 -     43889 ----t-gtgata-a-----------tt--aaa----a
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          15262 14 +     27357 ----c-atgata-a-----------tt--aaa----a
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               160032 18 +    324696 tgagt-gcgata-a-----------tt--aaa----a
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    186450 18 -    189561 -GAG--ttgtta-a-----------tt--aaa--aga
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           16930 18 -     18683 TAAGT-GTAATA-A-----------TT--AAA----A
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               9711 18 -     14630 TGAAT-GTGATA-A-----------TG--AGA----A
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119656811 18 - 195582420 tgaat-gtgata-a-----------tg--aga----a
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   80245 18 +    118900 TAACT-GTAATA-A-----------TT--AAA----A
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         6522 18 +     10286 taagt-gtgata-g-----------tt--aaa----a
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             5000 18 -     11661 taagt-gtgata-g-----------tt--aaa----a
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                            10327 18 +     56096 taagt-gtgata-g-----------tt--aaa----a
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        33576 18 -     42470 taagt-gtgata-g-----------tt--aaa----a
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        50199 18 -     54384 taagt-gtgata-g-----------tt--aaa----a
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              23077 20 +     53719 tgagt-gtgata-a-----------GT--AGAA--GA
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                33342 19 -     91191 -GAGT-TTGTTA-A-----------TT--AAAA--GA
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2561099 18 +  31725842 TTAAT-CCAATA-A-----------TT--A-AA---A
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               63323 18 +     73687 taagt-gtgagt-c-----------tt--aaa----g
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              151102 20 +    277961 TGAGT-ATGACA-G-----------TT--AAAA--GA
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      283489 20 -    477199 TAAGT-Gtgata-a-----------tt--aaa--aga
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_7653                6039 20 +     86108 TCAGT-GTGATA-A-----------TT--AAAA--GA
i Hipposideros_galeritus.HipGal_scaffold_7653           I 13 C 0
s Hoolock_leuconedys.ctg79                                      9626 18 -   7690867 tgaat-gtgata-a-----------tg--aga----a
i Hoolock_leuconedys.ctg79                                 I 1651 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 23550 20 -     67322 TGAGT-GTGATA-A-----------GT--AGAA--GA
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           21695 18 -    119109 TAAAC-GCAACA-C-----------AT--AAA----A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_1816750                             2197 18 +      3202 TGAAT-GTGATA-A-----------TG--AGA----A
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1136966                               206 18 +      9785 TGAAT-GTGATA-A-----------TG--AGA----A
i Hylobates_agilis.k141_1136966                         C 0 C 0
s Hylobates_klossii.k141_468230                              3686 18 +      5464 TGAAT-GTGATA-A-----------TG--AGA----A
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14629032 18 -  25970782 TGAAT-GTGATA-A-----------TG--AGA----A
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            1584 18 +      4161 TGAAT-GTGATA-A-----------TG--AGA----A
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             37140 18 -     60944 TGAAT-GTGATA-A-----------TG--AGA----A
i Hylobates_pileatus_a.tarseq_592                         C 0 I 742
s Hystrix_cristata.HysCri_scaffold_50788                    10002 18 +     22540 TGAAT-GTAATT-A-----------TT--AAA----A
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7130832 11 +  13083262 --------aata-a-----------tt--aaa----a
i Ictidomys_tridecemlineatus.JH393315.1                 I 1 I 1
s Indri_indri.k141_2197838                                   2041 18 +      3484 taagt-gcgata-g-----------tt--aaa----a
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              13301 20 +     17520 TGAGT-ATGATA-A-----------TT--AAAA--GA
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8579437 18 +  11848649 TCAGA-ACAAAA-A-----------TT--AAG----A
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               27920 20 +     37189 TGAGT-ATGATA-A-----------TT--AAAA--GA
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          54481 18 -    147782 TTATT-GTGATA-A-----------TT--GGA----A
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    6002 19 +     26176 TGAGT-GTGATA-A-----------TT---TAAA--A
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258411874 18 - 285822530 taagt-gtgata-g-----------tt--aaa----a
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        29183 18 +     39228 TAGGT-GTGATA-A-----------TT--AAA----A
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            58547 18 +     63517 TAGGT-GTGATA-A-----------TT--AAA----A
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        36927 18 -     38897 TAGGT-GTGATA-A-----------TT--AAA----A
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      2973 18 -     13103 TAGGT-GTGATA-A-----------TT--AAA----A
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3091882 20 -   3498232 tgagt-gtgata-a-----------tT--AGAA--GA
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    21325 13 +     22452 TAAGT-GTGATA-A-----------C-----------
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            140235 20 +   3060487 tgagt-atgata-a-----------tT--AAAA--GA
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19252916 18 +  19376315 tgaat-gtgata-a-----------tg--aga----a
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           15720 14 +     84689 ----t-gtgata-a-----------tt--aaa----a
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3783458 14 +   6799190 ----t-gtgata-a-----------tt--aaa----a
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20599248 18 -  62548349 taagt-gtgagg-a-----------tt--aaa----a
i Loxodonta_africana.GL010040.1                         I 4 C 0
s Lycaon_pictus.CM007556.1                               11095635 20 +  39895028 TTAGT-gtgata-a-----------tt--aga--aaa
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             24667 18 +     74745 TGAAT-GTGATA-A-----------TG--AGA----A
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12711128 18 +  12821369 TGAAT-GTGATA-A-----------TG--AGA----A
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                3701 18 -     26467 TGAAT-GTGATA-A-----------TG--AGA----A
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           51572 18 +     63263 TGAAT-GTGATA-A-----------TG--AGA----A
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 3682 18 -     26361 TGAAT-GTGATA-A-----------TG--AGA----A
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 6872 18 -      7381 TGAAT-GTGATA-A-----------TG--AGA----A
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  50101 18 -     79256 TGAAT-GTGATA-A-----------TG--AGA----A
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196040199 18 + 196197964 TGAAT-GTGATA-A-----------TG--AGA----A
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11450369 18 +  11645122 TGAAT-GTGATA-A-----------TG--AGA----A
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   9055 18 -     46448 TGAAT-GTGATA-A-----------TG--AGA----A
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                6718 18 -     13212 TGAAT-GTGATA-A-----------TG--AGA----A
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 20398 18 -     55006 TGAAT-GTGATA-A-----------TG--AGA----A
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43845513 18 +  43892939 TGAAT-GTGATA-A-----------TG--AGA----A
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               21682 18 -     24607 TGAAT-GTGATA-A-----------TG--AGA----A
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               9052 18 -     27140 TGAAT-GTGATA-A-----------TG--AGA----A
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43442088 18 -  43563597 tgaat-gtgata-a-----------tg--aga----a
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4454892 18 -   4543643 tgaat-gtgata-a-----------tg--aga----a
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            152605 20 +    252755 TGAGT-GTGATA-A-----------TT--AAAA--GA
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             40199 20 +     58827 TGAGT-GTGATA-A-----------TT--AAAA--GA
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36878699 11 +  64221397 --------aata-a-----------tt--aaa----a
i Marmota_marmota.CZRN01000005.1                        I 1 I 1
s Megaderma_lyra.MegLyr_scaffold_3562                       66043 20 -    234502 TAAAG-ATGATA-A-----------TG--AAAA--GG
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             7012 20 -     87323 TGAGT-GTGATA-A-----------TT--AGAA--GA
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 1720 11 +    115071 --------ATTA-G-----------TT--AAT----A
i Meriones_unguiculatus.MerUng_scaffold_9483            I 1 C 0
s Mesocricetus_auratus.KB708139.1                         1051970 19 -  26018355 CAAGTCTTCATA-G-----------GT--AAA----A
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    2892 20 -     12939 TGAGT-ATGATA-A-----------TT--AAAA--GA
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16514904 18 +  47401472 TAGGT-gtgata-a-----------tt--aaa----a
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  41929 18 -     48017 agagt-gtgaga-a-----------tt--aaa----a
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               25394 20 -     32043 TGAGT-AGGAAA-A-----------TT--AGAA--GA
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22825066 10 -  98408828 --------aata-g-----------TT---AA----A
i Microtus_ochrogaster.CM001673.1                       I 6 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8213448 20 +  10048721 TGAGT-Gtgata-a-----------tt--aaa--aga
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            37939 20 +     45743 TGAGT-GTGATA-A-----------TT--AAAA--GA
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         6634 18 +     29742 tgaat-gtgata-a-----------tg--aga----a
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        17378 20 -    104932 tgagt-gtgata-a-----------tT--AGAA--GA
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     5587 18 -     12809 taggt-gtgata-a-----------tt--aaa----a
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 150666 20 +    154973 tgagt-atgata-a-----------tT--AAAA--GA
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                163923 14 +    265003 -------TGATA-A-----------TT--AAAA--GA
i Mormoops_blainvillei.MorMeg_scaffold_2952             I 4 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  6691 19 -     19904 -GAGT-TTGTTA-A-----------TT--AAAA--GA
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  150754 20 -    168139 tgagt-gtgata-a-----------GT--AGAA--GA
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          24863 20 -    100666 TGACT-GTGATA-A-----------TT--TTAAA--A
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70772294 19 +  92629107 CAAGTCTTAATA-G-----------TT--AAA----A
i Mus_caroli.LT608236.1                                 I 11 C 0
s Mus_musculus.chr16                                     75494348 19 +  98207768 TAAGTCTTAATA-G-----------TT--AAA----A
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67561102 19 +  89017189 TAAGTCTTAATA-G-----------TT--AAA----A
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74337074 17 +  97876770 T--GTCTTAATA-G-----------TT--AAA----A
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             15334 18 +     98495 tatgt-gtaata-a-----------tt--aaa----a
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4429118 20 -  28371801 tgagt-gtgata-a-----------tT--AGAA--GA
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     96097 18 -    117718 TGAAT-GTAAAA-A-----------TT--AGA----A
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               971741 20 +   8389877 TGAgt-gtgata-a-----------tt--tta--aaa
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5023155 20 +   6462685 tgagt-gtgata-a-----------tt--tta--aaa
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3469246 21 -   3747815 TGAgt-gtgata-a-----------tt--taa-aaaa
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        14480 20 +     66751 tgagt-gtgata-a-----------tT--TAAAA--A
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             8123 18 -      8794 TGAGT-ATGAGA-A-----------TT--AAA----A
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            241066 17 -    362372 tggc--tcagca-g-----------tt--aaa----a
i Nannospalax_galili.KL201303.1                         C 0 I 650
s Neomonachus_schauinslandi.NINY01007774.1                4490776 20 -  14209539 tgagt-gtgata-a-----------tT--AGAA--GA
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3955257 20 -   4490290 tgagt-atgata-a-----------tt--aaa--aga
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  50991 20 +     94413 TGAGT-GAAATA-A-----------AT--AAAA--GA
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_762468                             703 18 -      2755 tgaat-gtgata-a-----------ta--aga----a
i Nomascus_annamensis.k141_762468                       C 0 C 0
s Nomascus_concolor.k141_256540                              7315 18 -      8966 tgaat-gtgata-a-----------tg--aga----a
i Nomascus_concolor.k141_256540                         C 0 C 0
s Nomascus_gabriellae.k141_1400361                           1254 18 -      2203 tgaat-gtgata-a-----------tg--aga----a
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_453                             6566 18 +     12787 tgaat-gtgata-a-----------tg--aga----a
i Nomascus_siki_b.tarseq_453                        C 0 C 0
s Nomascus_siki_a.k141_421408                                  1168 18 +     16235 tgaat-gtgata-a-----------tg--aga----a
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                38500 20 +   3668941 TGAGT-GTGATA-A-----------TT--AGAAA--A
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65572383 14 -  95554990 ----t-gtaata-a-----------tt--aaa----a
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_771591                            15793 14 +     16181 ----T-GTAATA-A-----------TT--AAA----A
i Nycticebus_coucang.k141_771591                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65680571 14 +  89412551 ----t-gtaata-a-----------tt--aaa----a
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            5000366 18 -  23139505 TAAGT-GTGATA-A-----------TT--AAA----A
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3691437 18 +  10294119 TGAAT-GTAATA-A-----------TT--GGA----A
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             685480 20 -   3126709 tgagt-gtgata-a-----------tT--AGAA--GA
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1084121 19 +   1425656 -GAGT-TTGTTA-A-----------TT--CAAA--GA
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         42190 19 +     78940 -GAGT-ttgtta-a-----------tt--aaa--aga
i Okapia_johnstoni.LVCL01S0017931.1                     I 3 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  130865 10 +    145789 --------AATA-G-----------TT---AA----A
i Ondatra_zibethicus.OndZib_scaffold_6821               I 6 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  43742 19 +     62360 TAAGTCTTAATA-G-----------TT--AAA----A
i Onychomys_torridus.OnyTor_scaffold_12578              I 189 C 0
s Orcinus_orca.KB316965.1                                 7228931 20 -   7562323 tgagt-acgata-a-----------tt--aaa--aga
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              64653 18 -     66828 tgagt-gtgaaa-a-----------tt--aaa----a
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141884342 13 + 163896628 TAAGT-GTGATA-A-----------C-----------
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      315638 20 -    505867 TGAGT-gtgata-a-----------tt--aga--aaa
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        5619 14 -     53940 ----t-gtgata-a-----------tt--aaa----a
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18013588 14 -  38779656 ----T-GTGATA-A-----------TT--AAA----A
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134083128 19 - 275406953 -GAGT-ttgtta-a-----------tt--aaa--aga
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      84362 19 +    140051 -GAGT-TTGTTA-A-----------TT--AAAA--GA
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127578990 18 - 205426864 tgaat-gtgaTA-A-----------TG--AGA----A
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120156150 18 - 196562556 tgaat-gtgaTA-A-----------TG--AGA----A
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  40374 20 +    295523 CGAGT-GTGATA-A-----------AT--AGAA--GA
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3644189 20 +  18214204 tgagt-gtgata-a-----------at--aga--aga
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5033837 20 -   6340057 tgagt-gtgata-a-----------at--aga--aga
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1071999 19 -   1292953 -GAGT-ttgtta-a-----------tt--aaa--aga
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188160877 18 - 188283584 tgaat-gtgaTA-A-----------TG--AGA----A
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              3967 18 +     25005 tgaat-gtgata-a-----------tg--aga----a
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47518249 18 +  47705337 tgaat-gtgata-a-----------tg--aga----a
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 72240 18 -    104429 tgaat-gtgata-a-----------tg--aga----a
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   10772 18 +     14967 tgaat-gtgata-a-----------tg--aga----a
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 6637 18 -      7628 tgaat-gtgata-a-----------tg--aga----a
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    121856 20 -    135482 TGAGT-GTGATA-A-----------GT--AAAA--GA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          11283 14 -     23713 ----t-ctgaga-a-----------tt--aaa----a
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           12434 14 +     61070 ----t-ctgaga-a-----------tt--aaa----a
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       2731 33 +     49596 TAAGT-GTATTA-AAAGACATGGTATT--AAAAAAGA
i Perognathus_longimembris.PerPac_flattened_line_19359  I 2 C 0
s Peromyscus_maniculatus.KI615518.1                       4955917 19 -   8017169 taagtcttaata-G-----------TT--AAA----A
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              3398 20 +      8220 TGAGT-ATGATA-A-----------TT--AAAA--GA
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306           100023 19 +    112873 TGAGT-GTGATA-A-----------TT---TTAA--A
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           9876 19 +     21690 TGAGT-A-GATA-A-----------TT--AAAA--GA
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       26571 18 +     44506 TGATT-GTGATA-A-----------TG--AGA----A
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        26784 18 +     67491 TGATT-GTGATA-A-----------TG--AGA----A
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      17023 18 -     98129 TGATT-GTGATA-A-----------TG--AGA----A
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     26624 18 +    147771 TGATT-GTGATA-A-----------TG--AGA----A
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         3259 18 -     43940 TGATT-GTGATA-A-----------TG--AGA----A
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          7342 18 -     55515 TGATT-GTGATA-A-----------TG--AGA----A
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         26696 18 +    152463 TGATT-GTGATA-A-----------TG--AGA----A
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       4504 18 -    119457 TGATT-GTGGTA-A-----------TG--AGA----A
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         16418 18 +    134592 TGATT-GTGATA-A-----------TG--AGA----A
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          27006 18 -     75465 TGATT-GTGATA-A-----------TG--AGA----A
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              191621 18 -    373494 tgaat-gtgaTA-A-----------TG--AGA----A
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19812268 18 +  19899266 tgaat-gtgata-a-----------tg--aga----a
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                4429 18 -      9567 TAAGT-GTGAGT-C-----------TT--AAA----G
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6853248 18 +  12164890 TAAGT-GTGATA-G-----------TT--AAA----A
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     22055 18 -     30946 NNNNN-NNNNNN-N-----------NN--NNN----N
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         8332 18 +     11805 TAAGT-GTGATA-G-----------TT--AAA----A
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           47666 18 +     52369 TAAGT-GTGATA-G-----------TT--AAA----A
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         40053 18 -     44753 taagt-gtgata-g-----------tt--aaa----a
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            21976 18 +     27322 TAAGT-GTGATA-G-----------TT--AAA----A
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       21625 18 -     53241 TAAGT-GTGATA-G-----------TT--AAA----A
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         43888 18 -     48185 TAAGT-GTGATA-G-----------TT--AAA----A
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           38708 11 +     77221 --------ATTA-G-----------TT--AAT----A
i Psammomys_obesus.NESX01026517.1                       I 1 C 0
s Pteronotus_parnellii.KE867983.1                            6577 13 -     27784 -------tgata-a-----------tt--aaa---aa
i Pteronotus_parnellii.KE867983.1                       I 4 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        250765 20 -    344369 TGAGT-ATGATA-A-----------TT--AGAA--GA
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Puma_concolor.QAVW01000427.1                          131540486 20 - 161321710 tgagt-gtgata-a-----------at--aga--aga
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                20986 19 +     68503 -GAGT-TTGTTA-A-----------TT--AAAA--GA
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13918133 19 +  90463843 caagcattaata-t-----------tt--aaa----a
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1793064 20 +   2252614 TGAGT-GTGatc-a-----------tt--aaa--aga
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                      1397 17 -      4338 ---GT-TTGTTA-A-----------TT--AAGA--GA
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15677028 18 -  43202129 TGATT-GTGATT-A-----------TG--AGA----A
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        8941 18 +     34089 TGATT-GTGATT-A-----------TG--AGA----A
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              8881 18 -     60842 TGATT-GTGATT-A-----------TG--AGA----A
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              8975 18 +     67014 TGATT-GTGATT-A-----------TG--AGA----A
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              8952 18 +     60816 TGATT-GTGATT-A-----------TG--AGA----A
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 8889 18 -     76454 TGATT-GTGATT-A-----------TG--AGA----A
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17345674 18 -  30362882 tgatt-gtgatt-a-----------tg--aga----a
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         24995 18 -     62485 tgatt-gtgatt-a-----------tg--aga----a
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   40053  4 -    114521 --AAT-A------------------------------
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  105913 15 -    120886 ----TTTTAATA-G-----------TT--AGA----A
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            24021 11 +    739146 TGAGT-ATGACA-------------------------
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 I 3
s Sorex_araneus.JH798170.1                               17774242 17 -  27805282 tatat-gtaatC-A-----------TT--GAA-----
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2244533 11 +   2842873 --------aata-a-----------tt--aaa----a
i Spermophilus_dauricus.KZ294190.1                      I 1 I 1
s Spilogale_gracilis.SpiGra_flattened_line_905             239555 20 -    276980 tgagt-gtgata-a-----------tT--AGAA--GA
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            33669 20 +     62062 tgagt-gtgata-a-----------GT--AGAA--GA
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189275431 18 + 218635234 TGAgt-gtggca-a-----------tt--aaa----a
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        19291 18 -  13920577 TGAAT-GTGATA-A-----------TG--AGA----A
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                2804 20 +     20549 tgggt-gtgata-a-----------tT--AAAA--GA
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               17796 18 +     45698 TGAGT-ATGAGA-A-----------TT--AAA----A
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      811274 20 +   1148477 TAAGT-GTGATA-A-----------TT--AAAA--GA
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  61916 20 +     99546 TAAGT-GTGATA-A-----------TT--AAAA--GA
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194012410 18 - 194193292 tgaat-gtgaTA-A-----------TG--AGA----A
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                   874 11 -      3104 caagt-gtgagg-------------------------
i Tolypeutes_matacus.TolMat_scaffold_475685             C 0 I 7
s Tonatia_saurophila.TonSau_scaffold_3334                  138569 15 -    259118 ------GTGATA-A-----------TT--AAAA--GA
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trichechus_manatus.JH594618.1                          16090324 13 +  31416278 ------gtgagg-a-----------tt--aaa----a
i Trichechus_manatus.JH594618.1                         I 5 C 0
s Tupaia_chinensis.KB320831.1                             2801603 12 -   3938065 -------tgata-a-----------ta--aaa----a
i Tupaia_chinensis.KB320831.1                           I 4 C 0
s Tupaia_tana.TupTan_flattened_line_68454                   10426 12 +     13056 -------TGATA-A-----------TA--AAA----A
i Tupaia_tana.TupTan_flattened_line_68454               I 4 C 0
s Tursiops_truncatus.MRVK01000923.1                      69317667 14 -  96451834 -------cgata-a-----------tt--aaa--aga
i Tursiops_truncatus.MRVK01000923.1                     I 6 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                     521  4 +    136657 --AAT-G------------------------------
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 C 0
s Ursus_maritimus.KK498671.1                              6521188 20 +  28682327 tgagt-ctgata-a-----------tT--AGAA--GA
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  9890 18 -     20643 taagt-gtgata-g-----------tt--aaa----a
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             29425 18 -     33872 taagt-gtgata-g-----------tt--aaa----a
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1528700 18 -   2331223 TGAGt-gtgata-a-----------tt--aaa----a
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                144865 20 -    281493 TGAGT-GTGATA-A-----------TT--AGAAA--A
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       132023 18 -    134049 taagt-ataata-a-----------tT--AAA----A
i Xerus_inauris.XerIna_scaffold_7898                    C 0 I 1
s Zalophus_californianus.ZalCal_flattened_line_4097        220337 20 -    227762 tgagt-gtgata-a-----------tT--AGAA--TA
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_202118                     1527  6 -      3360 -------------------------AT--AAA----A
i Zapus_hudsonius.ZapHud_scaffold_202118                I 9 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            2400 20 -     13665 TGAGT-ATGATA-A-----------TT--AAAA--GA
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Petromus_typicus.PetTyp_scaffold_33007                    17492  0 -     36578 C
e Tragulus_javanicus.TraJav_scaffold_14717                   9488 743 +     90398 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Trachypithecus_pileatus.k141_532233                       30126  0 -     40754 I
e Trachypithecus_phayrei.ctg364                            232455  0 -   1198723 I
e Trachypithecus_obscurus.k141_411399                         131  0 +     12010 I
e Trachypithecus_melamera.k141_950981                        2232  0 -      3512 I
e Trachypithecus_leucocephalus.k141_352489                   1214  0 +      9423 I
e Trachypithecus_laotum.k141_897381                         45646  0 -     53586 I
e Trachypithecus_hatinhensis.k141_641377                     1240  0 +      1365 I
e Trachypithecus_germaini.k141_240878                        5067  3 -     24955 I
e Trachypithecus_geei.k141_137495                           30106  0 -     42322 I
e Trachypithecus_francoisi.k141_1012484                       874  0 +      8809 I
e Trachypithecus_cristatus.k141_968903                      32589  3 +     43409 I
e Trachypithecus_crepusculus.k141_863597                     4944  0 -     23436 I
e Trachypithecus_auratus.k141_672638                         4947  3 +     38635 I
e Tarsius_wallacei.k141_48636                               64696  0 +     65473 C
e Tarsius_lariang.k141_609102                               31387  0 +     42269 C
e Semnopithecus_vetulus.k141_748269                          4706  0 +     17284 I
e Semnopithecus_schistaceus.k141_628310                     45652  0 -     53123 I
e Semnopithecus_priam.k141_368201                           10107  0 -     20692 I
e Semnopithecus_johnii.k141_1300894                          1368  0 +     13764 I
e Semnopithecus_hypoleucos.k141_2141024                      1351  0 -      8815 I
e Semnopithecus_entellus.k141_1743075                       45578  0 +     45790 I
e Rhinopithecus_strykeri.ctg241                            462135  0 +   1472273 I
e Rhinopithecus_bieti.k119_554384                            2917  0 -     17045 C
e Pygathrix_nigripes_a.k141_758202                             3050  0 -      8240 I
e Pygathrix_nigripes_b.ctg25                                14340869  0 -  15297009 I
e Pygathrix_cinerea.k141_951151                              3033  0 -      8225 I
e Presbytis_mitrata.k141_1767317                            10996  0 +     15869 I
e Presbytis_comata.k141_678168                              11007  0 +     11126 I
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000342.1                3428480  0 -   4356645 I
e Piliocolobus_kirkii.k141_451083                            4879  0 -     13367 I
e Piliocolobus_gordonorum.k141_736355                       29715  0 +     67079 I
e Piliocolobus_badius.k141_512007                           29798  0 +     37672 I
e Nasalis_larvatus.k141_1382660                              4275  0 +      5784 I
e Colobus_polykomos.k141_1178012                               88  3 -     11758 I
e Colobus_guereza.LG08                                   96946830  0 - 156195979 I
e Colobus_angolensis.KN983490.1                            283936  0 +    886210 I
e Cephalopachus_bancanus.k141_702587                        12545  0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530  0 +    345090 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               18031  4 +    209709 G-A--------------------------AA
s Acinonyx_jubatus.LLWD01000356.1                         2039980  2 +   3721120 -----------------------------aa
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    118333  4 -    189883 G-A--------------------------CA
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10663940  2 +  23371972 -----------------------------AA
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7100466  2 -  16596857 -----------------------------AG
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_141108                   1716  4 -      7259 G-G--------------------------CA
i Allactaga_bullata.AllBul_scaffold_141108              C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   5905  4 -     60446 G-A--------------------------AA
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         6621  4 -     29318 g-a--------------------------aa
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         5559  4 +     38766 g-a--------------------------aa
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          6515  4 -     80423 g-a--------------------------aa
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              1499  4 +     19852 g-a--------------------------aa
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                3743  4 -     12443 g-a--------------------------aa
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                             1042  4 +      5070 g-a--------------------------aa
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                  787  4 -      1641 g-a--------------------------aa
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          3526  4 -     24210 g-a--------------------------aa
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           30108  4 -     30219 g-a--------------------------aa
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_405616                              5944  4 +     16794 g-a--------------------------aa
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                            1076  4 -      1470 g-a--------------------------aa
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             5221  4 -      9835 g-a--------------------------aa
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3526012  2 +   4113121 -----------------------------aa
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      393031  2 -    631301 -----------------------------AA
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             3444  2 +     55446 -----------------------------AA
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 66831  4 +     78111 g-a--------------------------aa
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            9779  4 +     22701 G-A--------------------------AA
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5753735  4 +   9889416 G-A--------------------------AA
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                            10334  4 -    104377 g-a--------------------------aa
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                              10341  4 +     23246 g-a--------------------------aa
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     3003  2 +     11424 -----------------------------CA
i Aplodontia_rufa.AprRuf_scaffold_101456                I 1 C 0
s Arctocebus_calabarensis.k141_587554                        6924  4 +      9265 g-a--------------------------aa
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                11440  2 -     29036 -----------------------------AA
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9543628  4 +  39197703 g-a--------------------------aa
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             64902  4 +     85812 g-a--------------------------aa
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                15915  4 +     89302 g-a--------------------------aa
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             20416  4 -     58268 g-a--------------------------aa
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             68410  4 +    119057 g-a--------------------------aa
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              10379  4 -     25888 g-a--------------------------aa
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                11442  4 -     16375 g-a--------------------------aa
i Avahi_laniger.k141_2840928                            C 0 I 4
s Avahi_peyrierasi.k141_798820                               5058  4 +      6337 g-a--------------------------aa
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26384490  2 +  51448160 -----------------------------aa
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        9663  2 -     13118 -----------------------------aa
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   48476  2 -     72089 -----------------------------AA
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   302615  2 -   6870073 -----------------------------aa
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22956713  2 + 161108492 -----------------------------aa
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     418954  2 +    998990 -----------------------------aa
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22665367  2 + 158972876 -----------------------------aa
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               675304  2 +   1914593 -----------------------------aa
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               118279  4 -    171031 g-a--------------------------aa
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 17299  4 +    125063 g-a--------------------------aa
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                19346  4 -    216513 g-a--------------------------aa
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       11889  4 -    134917 g-a--------------------------aa
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3223610  2 -   8989139 -----------------------------ta
i Camelus_bactrianus.KN276303.1                         C 0 I 1
s Camelus_dromedarius.KN271192.1                           401311  2 -  15254737 -----------------------------aa
i Camelus_dromedarius.KN271192.1                        C 0 I 1
s Camelus_ferus.KB016973.1                                2977048  2 +   6889770 -----------------------------ta
i Camelus_ferus.KB016973.1                              C 0 I 1
s CanFam4.chr31                                          11526805  2 +  39901454 -----------------------------AA
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   21779  2 +     87036 -----------------------------AA
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11273488  2 -  35597290 -----------------------------aa
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11096199  2 +  39895921 -----------------------------aa
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16462984  2 -  44759192 -----------------------------aa
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21333956  2 + 157394656 -----------------------------aa
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135712311  2 - 157403528 -----------------------------aa
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_780116                    12  4 +      1571 G-A--------------------------CT
i Capromys_pilorides.CapPil_scaffold_780116             C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               62454  2 +     67245 -----------------------------AA
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_1326                      461  4 -    202837 A-A--------------------------TA
i Castor_canadensis.CasCan_scaffold_1326                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   163118  2 -    276539 -----------------------------AA
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15790155  4 -  24422027 G-A--------------------------CC
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15802094  4 -  24440124 g-a--------------------------cc
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       180266  4 +    436027 G-A--------------------------CC
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18896004  4 -  29618158 g-a--------------------------aa
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                12654  4 -     26817 g-a--------------------------aa
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                16898  4 +     25043 g-a--------------------------aa
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4368059  2 +   7569818 -----------------------------aa
i Ceratotherium_simum.JH767818.1                        C 0 I 254
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         7816  2 -      9338 -----------------------------AA
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 I 254
s Cercocebus_atys.KQ010443.1                              6559845  4 +   6739814 g-a--------------------------ca
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      31322  4 +     60454 g-a--------------------------aa
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          6526  4 -     21101 g-a--------------------------ca
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         63836  4 -    107033 g-a--------------------------ca
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        6699  4 -     17608 g-a--------------------------aa
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          3864  4 +     45019 g-a--------------------------aa
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           4140  4 +     15177 g-a--------------------------aa
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          6746  4 +     16677 g-a--------------------------aa
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           28936  4 +     35983 g-a--------------------------aa
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11995467  4 +  12117833 g-a--------------------------aa
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46482443  4 +  46592721 g-a--------------------------aa
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                        560  4 -     27215 g-a--------------------------aa
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       6760  4 +     35577 g-a--------------------------aa
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        6554  4 -     25661 g-a--------------------------aa
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        6726  4 -     17744 g-a--------------------------aa
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        26095  4 +     37128 g-a--------------------------aa
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           5052  4 -      6963 g-a--------------------------aa
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      I 7 C 0
s Cheirogaleus_major.k141_1157592                           63651  4 -     68416 g-a--------------------------aa
i Cheirogaleus_major.k141_1157592                       C 0 I 4
s Cheirogaleus_medius.k141_133808                           12771  4 +     13308 g-a--------------------------aa
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             9940  4 -     18223 G-A--------------------------AA
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              1678  4 +    188999 G-A--------------------------AA
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           45977  4 +     57117 G-A--------------------------AA
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          50657  4 +     54541 G-A--------------------------AA
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15964848  4 +  43084221 G-A--------------------------CC
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         75458  4 +    196370 g-a--------------------------ca
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          19639  4 +     40510 g-a--------------------------ca
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15144280  4 -  15256731 g-a--------------------------aa
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      38744  4 -     53260 g-a--------------------------aa
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101149303  4 + 101219884 G-A--------------------------AA
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                19175  4 -     21363 G-A--------------------------AA
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           764479  4 +    964067 g-a--------------------------aa
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_954668              1388  4 -      1738 T-A--------------------------AA
i Chrysochloris_asiatica.ChrAsi_scaffold_954668         C 0 C 0
s Condylura_cristata.JH655880.1                          60622598  3 +  78930452 --a--------------------------ta
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         2977  2 -      5782 -----------------------------AA
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 283116  4 -    399297 G-A--------------------------CA
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53035465  4 +  72327488 G-A--------------------------CA
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              2565  3 -     22648 --A--------------------------AA
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            57959  2 -     70449 -----------------------------AA
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  214735  4 -    956709 G-A--------------------------CA
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 36399  4 -     67205 G-A--------------------------CT
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                21338  4 +     26546 G-A--------------------------CC
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             62478  4 -    236241 G-A--------------------------CC
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          186111  4 -   6883506 g-a--------------------------aa
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16849603  4 +  31942871 g-a--------------------------aa
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80041093  2 -  96802777 -----------------------------aa
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18701666  2 -  18957592 -----------------------------aa
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 326715  2 +    993696 -----------------------------aa
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   7347  2 +    151128 -----------------------------AA
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   160101  4 +    228994 G-A--------------------------CC
i Dinomys_branickii.DinBra_scaffold_1996                C 0 I 3
s Dipodomys_stephensi.DipSte_scaffold_84338                  3136 10 -     11986 --A-------------------AAAGAGACA
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                41052  4 -     73477 G-A--------------------------CC
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           23000379  4 -  44670279 g-a--------------------------aa
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1496692  2 +   1727528 -----------------------------aa
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7834633  4 +  15467074 t-a--------------------------aa
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        244278  4 -    369425 G-A--------------------------CA
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01076532.1                            609  4 +      9159 G-A--------------------------CA
i Ellobius_talpinus.LOJH01076532.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85877929  2 +  99434291 -----------------------------TA
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4709426  2 +   6522550 -----------------------------aa
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5856807  2 -   7175178 -----------------------------gg
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13355293  2 +  41866177 -----------------------------gg
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          16783  2 +     92910 -----------------------------gg
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11541734  3 +  16010500 --A--------------------------AG
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48781313  4 -  48907691 g-a--------------------------aa
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          319333  2 +    330699 -----------------------------AA
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             65790  2 +     89355 -----------------------------AA
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              9751  4 +     13586 G-A--------------------------AA
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_1015201                              3010  4 -      4292 G-A--------------------------AA
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            16147  4 +     36558 G-A--------------------------AA
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            12469  4 +     60246 g-a--------------------------aa
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                15954  4 +    109717 g-a--------------------------aa
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 3937  4 -     19505 G-A--------------------------AA
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                20612  4 +     27497 G-A--------------------------AA
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           23068  4 +     26808 G-A--------------------------AA
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                37800  4 +     46535 G-A--------------------------AA
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              20541  4 -     29447 G-A--------------------------AA
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129899400  2 - 159252932 -----------------------------AA
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129286375  2 - 158578461 -----------------------------AA
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 27474  2 +     52776 -----------------------------AA
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13896624  3 -  19261668 T-A--------------------------C-
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     215771  4 -    847004 g-a--------------------------ca
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           18132  4 -     43889 g-a--------------------------ca
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          15276  4 +     27357 g-a--------------------------aa
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               160050  4 +    324696 g-a--------------------------aa
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    186468  2 -    189561 -----------------------------aa
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           16948  4 -     18683 G-A--------------------------CA
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               9729  4 -     14630 G-A--------------------------AA
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119656829  4 - 195582420 g-a--------------------------aa
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   80263  4 +    118900 G-A--------------------------CA
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         6540  4 +     10286 g-a--------------------------aa
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             5018  4 -     11661 g-a--------------------------aa
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                            10345  4 +     56096 g-a--------------------------aa
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        33594  4 -     42470 g-a--------------------------aa
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        50217  4 -     54384 g-a--------------------------aa
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              23097  2 +     53719 -----------------------------AA
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                33361  2 -     91191 -----------------------------AA
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2561117  3 +  31725842 G-A--------------------------T-
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               63341  4 +     73687 g-a--------------------------aa
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              151122  2 +    277961 -----------------------------AA
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      283509  2 -    477199 -----------------------------aa
i Hipposideros_armiger.JXIK01001085.1                   C 0 I 44
s Hipposideros_galeritus.HipGal_scaffold_7653                6059  2 +     86108 -----------------------------AA
i Hipposideros_galeritus.HipGal_scaffold_7653           C 0 C 0
s Hoolock_leuconedys.ctg79                                      9644  4 -   7690867 g-a--------------------------aa
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 23570  2 -     67322 -----------------------------AA
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           21713  4 -    119109 G-A--------------------------CA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_1816750                             2215  4 +      3202 G-A--------------------------AA
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1136966                               224  4 +      9785 G-A--------------------------AA
i Hylobates_agilis.k141_1136966                         C 0 C 0
s Hylobates_klossii.k141_468230                              3704  4 +      5464 G-A--------------------------AA
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14629050  4 -  25970782 G-A--------------------------AA
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            1602  4 +      4161 G-A--------------------------AA
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             37900 30 -     60944 A-Gggaatgattaaaggaggagctcagagaa
i Hylobates_pileatus_a.tarseq_592                         I 742 T 768
s Hystrix_cristata.HysCri_scaffold_50788                    10020  4 +     22540 G-A--------------------------CA
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7130844  2 +  13083262 -----------------------------ca
i Ictidomys_tridecemlineatus.JH393315.1                 I 1 C 0
s Indri_indri.k141_2197838                                   2059  4 +      3484 g-a--------------------------aa
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              13321  2 +     17520 -----------------------------AA
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8579455  4 +  11848649 G-G--------------------------CA
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               27940  2 +     37189 -----------------------------AA
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          54499  4 -    147782 G-A--------------------------AA
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    6021  2 +     26176 -----------------------------AA
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258411892  4 - 285822530 g-a--------------------------aa
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        29201  4 +     39228 G-A--------------------------AA
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            58565  4 +     63517 G-A--------------------------AA
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        36945  4 -     38897 G-A--------------------------AA
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      2991  4 -     13103 G-A--------------------------AA
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3091902  2 -   3498232 -----------------------------AA
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    21338  3 +     22452 --T--------------------------AC
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            140255  2 +   3060487 -----------------------------AA
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19252934  4 +  19376315 g-a--------------------------aa
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           15734  4 +     84689 g-a--------------------------ca
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3783472  4 +   6799190 g-a--------------------------ca
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20599266  4 -  62548349 g-a--------------------------aa
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11095655  2 +  39895028 -----------------------------aa
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             24685  4 +     74745 G-A--------------------------AA
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12711146  4 +  12821369 G-A--------------------------AA
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                3719  4 -     26467 G-A--------------------------AA
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           51590  4 +     63263 G-A--------------------------AA
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 3700  4 -     26361 G-A--------------------------AA
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 6890  4 -      7381 G-A--------------------------AA
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  50119  4 -     79256 G-A--------------------------AA
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196040217  4 + 196197964 G-A--------------------------AA
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11450387  4 +  11645122 G-A--------------------------AA
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   9073  4 -     46448 G-A--------------------------AA
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                6736  4 -     13212 G-A--------------------------AA
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 20416  4 -     55006 G-A--------------------------AA
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43845531  4 +  43892939 G-A--------------------------AA
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               21700  4 -     24607 G-A--------------------------AA
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               9070  4 -     27140 G-A--------------------------AA
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43442106  4 -  43563597 g-a--------------------------aa
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4454910  4 -   4543643 g-a--------------------------aa
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            152625  2 +    252755 -----------------------------AA
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             40219  2 +     58827 -----------------------------AA
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36878711  2 +  64221397 -----------------------------ca
i Marmota_marmota.CZRN01000005.1                        I 1 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       66063  2 -    234502 -----------------------------AA
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             7032  2 -     87323 -----------------------------AA
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 1731  4 +    115071 G-A--------------------------CA
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1051989  4 -  26018355 G-A--------------------------CA
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    2912  2 -     12939 -----------------------------AA
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16514922  4 +  47401472 g-a--------------------------aa
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  41947  4 -     48017 g-a--------------------------aa
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               25414  2 -     32043 -----------------------------AA
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22825076  4 -  98408828 G-A--------------------------CA
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8213468  2 +  10048721 -----------------------------aa
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            37959  2 +     45743 -----------------------------AA
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         6652  4 +     29742 g-a--------------------------aa
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        17398  2 -    104932 -----------------------------AA
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     5605  4 -     12809 g-a--------------------------aa
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 150686  2 +    154973 -----------------------------AA
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                163937  2 +    265003 -----------------------------AA
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  6710  2 -     19904 -----------------------------AA
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  150774  2 -    168139 -----------------------------AA
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          24883  2 -    100666 -----------------------------AA
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70772313  4 +  92629107 G-A--------------------------CA
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75494367  4 +  98207768 G-A--------------------------CA
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67561121  4 +  89017189 G-A--------------------------CA
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74337091  4 +  97876770 G-A--------------------------CA
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             15352  4 +     98495 g-a--------------------------ca
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4429138  2 -  28371801 -----------------------------TA
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     96115  4 -    117718 G-A--------------------------CT
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               971761  2 +   8389877 -----------------------------aa
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5023175  2 +   6462685 -----------------------------aa
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3469267  2 -   3747815 -----------------------------aa
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        14500  2 +     66751 -----------------------------AA
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             8141  4 -      8794 G-A--------------------------AA
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            241733  4 -    362372 g-c--------------------------ca
i Nannospalax_galili.KL201303.1                         I 650 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4490796  2 -  14209539 -----------------------------AA
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3955277  2 -   4490290 -----------------------------aa
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  51011  2 +     94413 -----------------------------AA
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_762468                             721  4 -      2755 g-a--------------------------aa
i Nomascus_annamensis.k141_762468                       C 0 C 0
s Nomascus_concolor.k141_256540                              7333  4 -      8966 g-g--------------------------aa
i Nomascus_concolor.k141_256540                         C 0 C 0
s Nomascus_gabriellae.k141_1400361                           1272  4 -      2203 g-a--------------------------aa
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_453                             6584  4 +     12787 g-a--------------------------aa
i Nomascus_siki_b.tarseq_453                        C 0 C 0
s Nomascus_siki_a.k141_421408                                  1186  4 +     16235 g-a--------------------------aa
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                38520  2 +   3668941 -----------------------------CA
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65572397  4 -  95554990 g-a--------------------------aa
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_771591                            15807  4 +     16181 G-A--------------------------AA
i Nycticebus_coucang.k141_771591                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65680585  4 +  89412551 g-a--------------------------aa
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            5000384  4 -  23139505 T-T--------------------------AA
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3691455  4 +  10294119 G-A--------------------------CT
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             685500  2 -   3126709 -----------------------------AA
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1084140  2 +   1425656 -----------------------------AA
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         42209  2 +     78940 -----------------------------aa
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  130875  4 +    145789 G-A--------------------------CA
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  43761  4 +     62360 G-A--------------------------CA
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7228951  2 -   7562323 -----------------------------aa
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              64671  4 -     66828 g-a--------------------------aa
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141884355  3 + 163896628 --T--------------------------AC
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      315658  2 -    505867 -----------------------------aa
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        5633  4 -     53940 g-a--------------------------ca
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18013602  4 -  38779656 G-A--------------------------CA
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134083147  2 - 275406953 -----------------------------aa
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      84381  2 +    140051 -----------------------------AA
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127579008  4 - 205426864 G-A--------------------------AA
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120156168  4 - 196562556 G-A--------------------------AA
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  40394  2 +    295523 -----------------------------AA
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3644209  2 +  18214204 -----------------------------aa
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5033857  2 -   6340057 -----------------------------aa
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1072018  2 -   1292953 -----------------------------aa
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188160895  4 - 188283584 G-A--------------------------AA
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              3985  4 +     25005 g-a--------------------------aa
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47518267  4 +  47705337 g-a--------------------------aa
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 72258  4 -    104429 g-a--------------------------aa
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   10790  4 +     14967 g-a--------------------------aa
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 6655  4 -      7628 g-a--------------------------aa
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    121876  2 -    135482 -----------------------------AA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          11297  4 -     23713 g-a--------------------------aa
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           12448  4 +     61070 g-a--------------------------aa
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       2764  4 +     49596 G-A--------------------------CA
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4955936  4 -   8017169 G-A--------------------------CA
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              3418  2 +      8220 -----------------------------AA
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306           100042  2 +    112873 -----------------------------AA
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           9895  2 +     21690 -----------------------------AA
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       26589  4 +     44506 G-A--------------------------AA
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        26802  4 +     67491 G-A--------------------------AA
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      17041  4 -     98129 G-A--------------------------AA
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     26642  4 +    147771 G-A--------------------------AA
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         3277  4 -     43940 G-A--------------------------AA
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          7360  4 -     55515 G-A--------------------------AA
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         26714  4 +    152463 G-A--------------------------AA
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       4522  4 -    119457 G-A--------------------------AA
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         16436  4 +    134592 G-A--------------------------AA
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          27024  4 -     75465 G-A--------------------------AA
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              191639  4 -    373494 G-A--------------------------AA
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19812286  4 +  19899266 g-a--------------------------aa
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                4447  4 -      9567 G-A--------------------------AA
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6853266  4 +  12164890 G-A--------------------------AA
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     22073  4 -     30946 N-N--------------------------NN
i Propithecus_coquerelli.NW_012147863.1                 C 0 I 3
s Propithecus_coronatus.k141_1353159                         8350  4 +     11805 G-A--------------------------AA
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           47684  4 +     52369 G-A--------------------------AA
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         40071  4 -     44753 g-a--------------------------aa
i Propithecus_edwardsi.k141_1317105                     C 0 I 4
s Propithecus_perrieri.k141_7554                            21994  4 +     27322 G-A--------------------------AA
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       21643  4 -     53241 C-A--------------------------AA
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         43906  4 -     48185 G-A--------------------------AA
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           38719  4 +     77221 G-A--------------------------CA
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            6590  2 -     27784 -----------------------------aa
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        250785  2 -    344369 -----------------------------TA
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Puma_concolor.QAVW01000427.1                          131540506  2 - 161321710 -----------------------------aa
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                21005  2 +     68503 -----------------------------AA
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13918152  4 +  90463843 g-a--------------------------ca
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1793084  2 +   2252614 -----------------------------aa
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                      1414  2 -      4338 -----------------------------AA
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15677046  4 -  43202129 G-A--------------------------AA
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        8959  4 +     34089 G-A--------------------------AA
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              8899  4 -     60842 G-A--------------------------AA
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              8993  4 +     67014 G-A--------------------------AA
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              8970  4 +     60816 G-A--------------------------AA
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 8907  4 -     76454 G-A--------------------------AA
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17345692  4 -  30362882 g-a--------------------------aa
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         25013  4 -     62485 g-a--------------------------aa
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   40057  2 -    114521 -----------------------------AA
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  105928  4 -    120886 G-A--------------------------TG
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            24035  4 +    739146 G-A--------------------------AA
i Solenodon_paradoxus.SolPar_flattened_line_1012        I 3 C 0
s Sorex_araneus.JH798170.1                               17774259  3 -  27805282 --A--------------------------GA
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2244545  2 +   2842873 -----------------------------ca
i Spermophilus_dauricus.KZ294190.1                      I 1 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             239575  2 -    276980 -----------------------------AA
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            33689  2 +     62062 -----------------------------AA
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189275449  2 + 218635234 -----------------------------aa
i Sus_scrofa.CM000824.4                                 C 0 I 2
s Symphalangus_syndactylus.tarseq_24                        19309  4 -  13920577 G-A--------------------------AA
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                2824  2 +     20549 -----------------------------AA
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               17814  4 +     45698 G-A--------------------------AA
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      811294  2 +   1148477 -----------------------------AA
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  61936  2 +     99546 -----------------------------AA
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194012428  4 - 194193292 G-A--------------------------AA
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                   892  4 -      3104 g-a--------------------------aa
i Tolypeutes_matacus.TolMat_scaffold_475685             I 7 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  138584  2 -    259118 -----------------------------AA
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trichechus_manatus.JH594618.1                          16090337  4 +  31416278 g-a--------------------------aa
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2801615  5 -   3938065 taa--------------------------aa
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                   10438  5 +     13056 GAA--------------------------AA
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69317681  2 -  96451834 -----------------------------aa
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                     525  3 +    136657 --A--------------------------GA
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 C 0
s Ursus_maritimus.KK498671.1                              6521208  2 +  28682327 -----------------------------AA
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  9908  4 -     20643 g-a--------------------------aa
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             29443  4 -     33872 g-a--------------------------aa
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1528718  2 -   2331223 -----------------------------aa
i Vicugna_pacos.KN269600.1                              C 0 I 1
s Vulpes_lagopus.VulLag_flattened_line_2045                144885  2 -    281493 -----------------------------AG
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       132042  2 -    134049 -----------------------------TA
i Xerus_inauris.XerIna_scaffold_7898                    I 1 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        220357  2 -    227762 -----------------------------AA
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_202118                     1533  4 -      3360 G-G--------------------------CA
i Zapus_hudsonius.ZapHud_scaffold_202118                C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            2420  2 -     13665 -----------------------------AA
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Petromus_typicus.PetTyp_scaffold_33007                    17492  0 -     36578 C
e Dipodomys_ordii.KN672545.1                              3660766  8 +   4240102 I
e Tragulus_javanicus.TraJav_scaffold_14717                   9488 743 +     90398 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Trachypithecus_pileatus.k141_532233                       30126  0 -     40754 I
e Trachypithecus_phayrei.ctg364                            232455  0 -   1198723 I
e Trachypithecus_obscurus.k141_411399                         131  0 +     12010 I
e Trachypithecus_melamera.k141_950981                        2232  0 -      3512 I
e Trachypithecus_leucocephalus.k141_352489                   1214  0 +      9423 I
e Trachypithecus_laotum.k141_897381                         45646  0 -     53586 I
e Trachypithecus_hatinhensis.k141_641377                     1240  0 +      1365 I
e Trachypithecus_germaini.k141_240878                        5067  3 -     24955 I
e Trachypithecus_geei.k141_137495                           30106  0 -     42322 I
e Trachypithecus_francoisi.k141_1012484                       874  0 +      8809 I
e Trachypithecus_cristatus.k141_968903                      32589  3 +     43409 I
e Trachypithecus_crepusculus.k141_863597                     4944  0 -     23436 I
e Trachypithecus_auratus.k141_672638                         4947  3 +     38635 I
e Tarsius_wallacei.k141_48636                               64696  0 +     65473 C
e Tarsius_lariang.k141_609102                               31387  0 +     42269 C
e Semnopithecus_vetulus.k141_748269                          4706  0 +     17284 I
e Semnopithecus_schistaceus.k141_628310                     45652  0 -     53123 I
e Semnopithecus_priam.k141_368201                           10107  0 -     20692 I
e Semnopithecus_johnii.k141_1300894                          1368  0 +     13764 I
e Semnopithecus_hypoleucos.k141_2141024                      1351  0 -      8815 I
e Semnopithecus_entellus.k141_1743075                       45578  0 +     45790 I
e Rhinopithecus_strykeri.ctg241                            462135  0 +   1472273 I
e Rhinopithecus_bieti.k119_554384                            2917  0 -     17045 C
e Pygathrix_nigripes_a.k141_758202                             3050  0 -      8240 I
e Pygathrix_nigripes_b.ctg25                                14340869  0 -  15297009 I
e Pygathrix_cinerea.k141_951151                              3033  0 -      8225 I
e Presbytis_mitrata.k141_1767317                            10996  0 +     15869 I
e Presbytis_comata.k141_678168                              11007  0 +     11126 I
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000342.1                3428480  0 -   4356645 I
e Piliocolobus_kirkii.k141_451083                            4879  0 -     13367 I
e Piliocolobus_gordonorum.k141_736355                       29715  0 +     67079 I
e Piliocolobus_badius.k141_512007                           29798  0 +     37672 I
e Nasalis_larvatus.k141_1382660                              4275  0 +      5784 I
e Colobus_polykomos.k141_1178012                               88  3 -     11758 I
e Colobus_guereza.LG08                                   96946830  0 - 156195979 I
e Colobus_angolensis.KN983490.1                            283936  0 +    886210 I
e Cephalopachus_bancanus.k141_702587                        12545  0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530  0 +    345090 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               18035  6 +    209709 TG---G--T--------------AT
s Acinonyx_jubatus.LLWD01000356.1                         2039982  6 +   3721120 ag---g--t--------------AC
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    118337  6 -    189883 TG---T--T--------------GA
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10663942  6 +  23371972 TG---G--T--------------AT
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7100468  6 -  16596857 TG---G--T--------------AT
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_141108                   1720  6 -      7259 CG---G--T--------------AA
i Allactaga_bullata.AllBul_scaffold_141108              C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   5909  6 -     60446 TG---G--A--------------AT
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         6625  6 -     29318 tg---g--a--------------at
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         5563  6 +     38766 tg---g--a--------------at
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          6519  6 -     80423 tg---g--a--------------at
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              1503  6 +     19852 tt---g--t--------------at
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                3747  6 -     12443 tt---g--t--------------at
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                             1046  6 +      5070 tt---g--t--------------at
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                  791  6 -      1641 tt---g--t--------------at
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          3530  6 -     24210 tt---g--t--------------at
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           30112  6 -     30219 tt---g--t--------------at
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_405616                              5948  6 +     16794 tt---g--t--------------at
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                            1080  6 -      1470 tt---g--t--------------at
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             5225  6 -      9835 tt---g--t--------------at
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3526014  6 +   4113121 ta---g--g--------------aT
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      393033  6 -    631301 TG---G--T--------------GT
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             3446  6 +     55446 TA---G--T--------------AT
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 66835  6 +     78111 tt---g--t--------------at
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            9783  6 +     22701 TT---G--T--------------AT
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5753739  6 +   9889416 TT---G--T--------------AT
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                            10338  6 -    104377 tt---g--t--------------at
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                              10345  6 +     23246 tt---g--t--------------at
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     3005  6 +     11424 TG---G--T--------------GT
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        6928  6 +      9265 tg---a--t--------------at
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                11442  6 -     29036 TA---G--T--------------GT
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9543632  6 +  39197703 tt---g--t--------------at
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             64906  6 +     85812 tt---g--t--------------at
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                15919  6 +     89302 tt---g--t--------------at
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             20420  6 -     58268 tt---g--t--------------at
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             68414  6 +    119057 tt---g--t--------------at
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              10383  6 -     25888 tt---g--t--------------at
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                11450  2 -     16375 -----------------------at
i Avahi_laniger.k141_2840928                            I 4 C 0
s Avahi_peyrierasi.k141_798820                               5062  3 +      6337 tg---g-------------------
i Avahi_peyrierasi.k141_798820                          C 0 I 3
s Balaenoptera_acutorostrata.KI537095.1                  26384492  6 +  51448160 ta---g--t--------------aT
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        9665  6 -     13118 ta---g--t--------------aT
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   48478  6 -     72089 TA---G--G--------------AT
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   302617  6 -   6870073 ta---g--t--------------aT
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22956715  6 + 161108492 ta---g--t--------------aT
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     418956  6 +    998990 ta---g--t--------------aT
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22665369  6 + 158972876 ta---g--t--------------aT
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               675306  6 +   1914593 ta---g--t--------------aT
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               118283  6 -    171031 tT---T--T--------------AT
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 17303  6 +    125063 tT---T--T--------------AT
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                19350  6 -    216513 tT---T--T--------------AT
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       11893  6 -    134917 tT---T--T--------------AT
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3223613  8 -   8989139 ta---gttt--------------at
i Camelus_bactrianus.KN276303.1                         I 1 C 0
s Camelus_dromedarius.KN271192.1                           401314  8 -  15254737 ta---gttt--------------at
i Camelus_dromedarius.KN271192.1                        I 1 C 0
s Camelus_ferus.KB016973.1                                2977051  8 +   6889770 ta---gttt--------------at
i Camelus_ferus.KB016973.1                              I 1 C 0
s CanFam4.chr31                                          11526807  6 +  39901454 TA---T--T--------------AT
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   21781  6 +     87036 TA---T--T--------------AT
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11273490  6 -  35597290 ta---t--t--------------at
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11096201  6 +  39895921 ta---t--t--------------at
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16462986  6 -  44759192 ta---t--t--------------at
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21333958  6 + 157394656 ta---g--g--------------aT
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135712313  6 - 157403528 ta---g--g--------------AT
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_780116                    16  9 +      1571 GAAACC--C--------------AT
i Capromys_pilorides.CapPil_scaffold_780116             C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               62456  6 +     67245 TA---G--C--------------AT
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_1326                      465  6 -    202837 TG---G--T--------------AT
i Castor_canadensis.CasCan_scaffold_1326                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   163120  6 -    276539 AA---A--T--------------AG
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15790159  2 -  24422027 AA-----------------------
i Cavia_aperea.AVPZ01000278.1                           C 0 I 3
s Cavia_porcellus.DS562889.1                             15802098  2 -  24440124 aa-----------------------
i Cavia_porcellus.DS562889.1                            C 0 I 3
s Cavia_tschudii.CavTsc_scaffold_488                       180270  2 +    436027 AA-----------------------
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 I 3
s Cebus_albifrons.Contig22                               18896008  6 -  29618158 tt---g--t--------------at
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                12658  6 -     26817 tt---g--t--------------at
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                16902  6 +     25043 tt---g--t--------------at
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4368315  6 +   7569818 ta---g--t--------------at
i Ceratotherium_simum.JH767818.1                        I 254 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         8072  6 -      9338 TA---G--T--------------AT
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    I 254 C 0
s Cercocebus_atys.KQ010443.1                              6559849  6 +   6739814 tg---g--a--------------at
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      31326  6 +     60454 tg---g--a--------------at
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          6530  6 -     21101 tg---g--a--------------at
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         63840  6 -    107033 tg---g--a--------------at
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        6703  6 -     17608 tg---g--a--------------at
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          3868  6 +     45019 tg---g--a--------------at
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           4144  6 +     15177 tg---g--a--------------at
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          6750  6 +     16677 tg---g--a--------------at
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           28940  6 +     35983 tg---g--a--------------at
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11995471  6 +  12117833 tg---g--a--------------at
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46482447  6 +  46592721 tg---g--a--------------at
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                        564  6 -     27215 tg---g--a--------------at
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       6764  6 +     35577 tg---g--a--------------at
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        6558  6 -     25661 tg---g--a--------------at
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        6730  6 -     17744 tg---g--a--------------at
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        26099  6 +     37128 tg---g--a--------------at
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           5056  6 -      6963 tG---G--T--------------AT
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 I 94
s Cheirogaleus_major.k141_1157592                           63659  2 -     68416 -----------------------at
i Cheirogaleus_major.k141_1157592                       I 4 C 0
s Cheirogaleus_medius.k141_133808                           12775  3 +     13308 tg---g-------------------
i Cheirogaleus_medius.k141_133808                       C 0 I 3
s Cheracebus_lucifer.k141_619653                             9944  6 -     18223 TT---G--T--------------AT
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              1682  6 +    188999 TT---G--T--------------AT
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           45981  6 +     57117 TT---G--T--------------AT
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          50661  6 +     54541 TT---G--T--------------AT
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15964852  9 +  43084221 AAATCC--T--------------AC
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         75462  6 +    196370 tt---t--t--------------at
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          19643  6 +     40510 tt---t--t--------------at
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15144284  6 -  15256731 tg---g--a--------------at
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      38748  6 -     53260 tg---g--a--------------at
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101149307  6 + 101219884 TG---G--A--------------AT
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                19179  6 -     21363 TT---G--T--------------AT
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           764483  6 +    964067 tt---g--t--------------AT
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_954668              1392  3 -      1738 --------T--------------AT
i Chrysochloris_asiatica.ChrAsi_scaffold_954668         C 0 C 0
s Condylura_cristata.JH655880.1                          60622601  6 +  78930452 tg---g--C--------------TT
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         2979  6 -      5782 TT---G--T--------------GT
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 283120  6 -    399297 TG---A--T--------------AG
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53035469  6 +  72327488 TG---A--T--------------AA
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              2568  6 -     22648 TT---A--A--------------AT
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            57961  6 -     70449 TG---G--T--------------AA
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  214739  6 -    956709 TA---G--C--------------AC
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 36403  9 -     67205 GAAACC--T--------------AT
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                21342  9 +     26546 AAAACC--T--------------AT
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             62482  9 -    236241 AAAACC--T--------------AT
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          186115  6 -   6883506 ta---g--t--------------at
i Dasypus_novemcinctus.JH568778.1                       C 0 I 105
s Daubentonia_madagascariensis.ctg11                     16849607  6 +  31942871 tg---g--t--------------at
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80041095  6 -  96802777 ta---g--t--------------aT
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18701668  6 -  18957592 ta---g--t--------------at
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 326717  6 +    993696 ta---g--t--------------aT
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   7349  6 +    151128 TA---G--T--------------AT
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   160108  1 +    228994 ------------------------C
i Dinomys_branickii.DinBra_scaffold_1996                I 3 C 0
s Dipodomys_ordii.KN672545.1                              3660774  4 +   4240102 -----G--T--------------AT
i Dipodomys_ordii.KN672545.1                            I 8 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  3146  6 -     11986 TG---G--T--------------AT
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                41056  9 -     73477 AAAACC--T--------------AT
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           23000383  6 -  44670279 at---a--t--------------gt
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1496694  7 +   1727528 ta---gt-t--------------AT
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7834637  6 +  15467074 tt---a--t--------------gt
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        244282  6 -    369425 TA---A--T--------------AG
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01076532.1                            613  6 +      9159 TA---A--T--------------AG
i Ellobius_talpinus.LOJH01076532.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85877931  6 +  99434291 TG---G--T--------------AT
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4709428  6 +   6522550 tt---a--t--------------at
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5856809  6 -   7175178 tg---g--t--------------at
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13355295  6 +  41866177 tg---g--t--------------at
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          16785  6 +     92910 tg---g--t--------------at
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11541737  6 +  16010500 TG---G--C--------------TC
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48781317  6 -  48907691 tg---g--a--------------at
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          319335  6 +    330699 TA---G--T--------------AT
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             65792  6 +     89355 TA---G--T--------------AT
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              9755  6 +     13586 TG---G--T--------------AT
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_1015201                              3014  6 -      4292 TG---G--T--------------AT
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            16151  6 +     36558 TG---G--T--------------AT
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            12473  6 +     60246 tg---g--t--------------at
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                15958  6 +    109717 tg---g--t--------------at
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 3941  6 -     19505 TG---G--T--------------AT
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                20616  6 +     27497 TG---G--T--------------AT
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           23072  6 +     26808 TG---G--T--------------AT
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                37804  6 +     46535 TG---G--T--------------AT
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              20545  6 -     29447 TG---G--T--------------AT
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129899402  6 - 159252932 AG---G--T--------------AC
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129286377  6 - 158578461 AG---G--T--------------AC
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 27476  6 +     52776 AG---G--T--------------AC
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13896627  4 -  19261668 -----A--T--------------AG
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     215775  6 -    847004 ta---a--t--------------at
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           18136  6 -     43889 ta---a--t--------------at
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          15280  6 +     27357 cg---c--t--------------at
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               160054  6 +    324696 tg---a--t--------------at
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    186470  6 -    189561 ta---g--t--------------aT
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           16952  6 -     18683 TG---G--T--------------AT
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               9733  6 -     14630 TG---G--T--------------AT
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119656833  6 - 195582420 tg---g--t--------------at
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   80267  6 +    118900 TG---G--T--------------AT
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         6544  3 +     10286 tg---g-------------------
i Hapalemur_alaotrensis.k141_1280836                    C 0 I 2
s Hapalemur_gilberti.k141_279011                             5022  3 -     11661 tg---g-------------------
i Hapalemur_gilberti.k141_279011                        C 0 I 2
s Hapalemur_griseus.k141_1387522                            10349  3 +     56096 tg---g-------------------
i Hapalemur_griseus.k141_1387522                        C 0 I 2
s Hapalemur_meridionalis.k141_186231                        33598  3 -     42470 tg---g-------------------
i Hapalemur_meridionalis.k141_186231                    C 0 I 2
s Hapalemur_occidentalis.k141_797938                        50221  3 -     54384 tg---g-------------------
i Hapalemur_occidentalis.k141_797938                    C 0 I 2
s Helogale_parvula.HelPar_flattened_line_22962              23099  6 +     53719 TG---G--T--------------AC
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                33363  6 -     91191 TA---G--G--------------AT
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2561120  4 +  31725842 -----A--T--------------AG
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               63345  6 +     73687 tt---a--t--------------gt
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              151124  6 +    277961 TA---G--T--------------AT
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001052.1                      277585 20 -    479840 tt---g--tgtcCATACAATTGTGT
i Hipposideros_armiger.JXIK01001052.1                   I 56 C 0
s Hipposideros_galeritus.HipGal_scaffold_7653                6061 20 +     86108 TT---G--TGTCCATACAATTGTGT
i Hipposideros_galeritus.HipGal_scaffold_7653           C 0 I 38
s Hoolock_leuconedys.ctg79                                      9648  6 -   7690867 tg---g--t--------------at
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 23572  6 -     67322 TT---G--T--------------AC
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           21717  9 -    119109 AAAACC--T--------------AT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_1816750                             2219  6 +      3202 TG---G--T--------------AT
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1136966                               228  6 +      9785 TG---G--T--------------AT
i Hylobates_agilis.k141_1136966                         C 0 C 0
s Hylobates_klossii.k141_468230                              3708  6 +      5464 TG---G--T--------------AT
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14629054  6 -  25970782 TG---G--T--------------AT
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            1606  6 +      4161 TG---G--T--------------AT
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             37162  6 -     60944 TG---G--T--------------AT
i Hylobates_pileatus_a.tarseq_592                         T 768 C 0
s Hystrix_cristata.HysCri_scaffold_50788                    10024  6 +     22540 TA---G--T--------------AA
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7130846  6 +  13083262 tg---A--T--------------AT
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   2063  3 +      3484 tg---g-------------------
i Indri_indri.k141_2197838                              C 0 I 3
s Inia_geoffrensis.IniGeo_flattened_line_66725              13323  6 +     17520 TA---G--T--------------AT
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8579459  6 +  11848649 TG---G--T--------------AA
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               27942  6 +     37189 TA---G--T--------------AT
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          54503  6 -    147782 TT---G--T--------------AT
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    6023  6 +     26176 TT---A--T--------------AT
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258411896  3 - 285822530 tg---g-------------------
i Lemur_catta.scaffold_1                                C 0 I 2
s Lepilemur_ankaranensis.k141_884009                        29205  3 +     39228 TG---G-------------------
i Lepilemur_ankaranensis.k141_884009                    C 0 I 3
s Lepilemur_dorsalis.k141_134267                            58569  3 +     63517 TG---G-------------------
i Lepilemur_dorsalis.k141_134267                        C 0 I 3
s Lepilemur_ruficaudatus.k141_574529                        36949  3 -     38897 TG---G-------------------
i Lepilemur_ruficaudatus.k141_574529                    C 0 I 3
s Lepilemur_septentrionalis.k141_710646                      2995  3 -     13103 TG---G-------------------
i Lepilemur_septentrionalis.k141_710646                 C 0 I 3
s Leptonychotes_weddellii.KB714749.1                      3091904  6 -   3498232 TG---G--T--------------AT
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    21341  6 +     22452 TA---G--T--------------AT
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            140257  6 +   3060487 CA---G--T--------------AT
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19252938  6 +  19376315 tg---g--a--------------at
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           15738  6 +     84689 tg---a--t--------------at
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3783476  6 +   6799190 tg---a--t--------------at
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20599270  6 -  62548349 tt---a--t--------------gt
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11095657  6 +  39895028 ta---t--t--------------at
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             24689  6 +     74745 TG---G--A--------------AT
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12711150  6 +  12821369 TG---G--A--------------AT
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                3723  6 -     26467 TG---G--A--------------AT
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           51594  6 +     63263 TG---G--A--------------AT
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 3704  6 -     26361 TG---G--A--------------AT
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 6894  6 -      7381 TG---G--A--------------AT
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  50123  6 -     79256 TG---G--A--------------AT
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196040221  6 + 196197964 TG---G--A--------------AT
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11450391  6 +  11645122 TG---G--A--------------AT
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   9077  6 -     46448 TG---G--A--------------AT
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                6740  6 -     13212 TG---G--A--------------AT
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 20420  6 -     55006 TG---G--A--------------AT
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43845535  6 +  43892939 TG---G--A--------------AT
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               21704  6 -     24607 TG---G--A--------------AT
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               9074  6 -     27140 TG---G--A--------------AT
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43442110  6 -  43563597 tg---g--a--------------at
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4454914  6 -   4543643 tg---g--a--------------at
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            152627  6 +    252755 CG---G--T--------------AT
i Manis_javanica.JSZB01003966.1                         C 0 I 1
s Manis_pentadactyla.KN017078.1                             40221  6 +     58827 TG---G--T--------------AT
i Manis_pentadactyla.KN017078.1                         C 0 I 1
s Marmota_marmota.CZRN01000005.1                         36878713  6 +  64221397 tG---G--T--------------AT
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       66065  6 -    234502 TT---G--T--------------GC
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             7034  6 -     87323 TG---G--T--------------AT
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 1735  6 +    115071 TG---G--T--------------GG
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1051993  6 -  26018355 TG---A--T--------------AA
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    2914  6 -     12939 TA---G--T--------------AT
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16514926  3 +  47401472 tg---g-------------------
i Microcebus_murinus.CM007691.1                         C 0 I 3
s Microgale_talazaci.MicTal_scaffold_34660                  41951  6 -     48017 ag---a--t--------------gt
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               25416  6 -     32043 TA---G--T--------------GT
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22825080  6 -  98408828 TA---A--T--------------AG
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8213470  6 +  10048721 tt---a--t--------------at
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            37961  6 +     45743 TT---A--T--------------AT
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         6656  6 +     29742 tg---g--a--------------at
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        17400  6 -    104932 TG---G--T--------------AT
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     5609  3 -     12809 tg---g-------------------
i Mirza_zaza.k141_593947                                C 0 I 3
s Monodon_monoceros.MonMon_M_scaffold_5598                 150688  6 +    154973 TA---G--T--------------AT
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                163939  6 +    265003 TA---G--T--------------GT
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  6712  6 -     19904 TA---G--T--------------AT
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  150776  6 -    168139 TG---G--T--------------AC
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          24885  6 -    100666 TT---A--T--------------AT
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70772317  6 +  92629107 TG---A--T--------------AT
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75494371  6 +  98207768 TG---A--T--------------AT
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67561125  6 +  89017189 TG---A--T--------------AT
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74337095  6 +  97876770 TG---A--T--------------AT
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             15356  6 +     98495 tg---g--t--------------at
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4429140  6 -  28371801 TG---G--T--------------AT
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     96119  9 -    117718 GAAACC--T--------------TT
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               971763  6 +   8389877 tt---a--t--------------at
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5023177  6 +   6462685 gt---a--t--------------at
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3469269  6 -   3747815 tt---a--t--------------at
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        14502  6 +     66751 GT---A--T--------------AG
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             8145  6 -      8794 TG---T--T--------------AT
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            241737  6 -    362372 TG---G--C--------------AT
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4490798  6 -  14209539 TG---G--T--------------AT
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3955279  6 -   4490290 ta---g--t--------------aT
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  51013  6 +     94413 TA---G--T--------------GT
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_762468                             725  6 -      2755 tg---g--t--------------at
i Nomascus_annamensis.k141_762468                       C 0 C 0
s Nomascus_concolor.k141_256540                              7337  6 -      8966 tg---g--t--------------at
i Nomascus_concolor.k141_256540                         C 0 C 0
s Nomascus_gabriellae.k141_1400361                           1276  6 -      2203 tg---g--t--------------at
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_453                             6588  6 +     12787 tg---g--t--------------at
i Nomascus_siki_b.tarseq_453                        C 0 C 0
s Nomascus_siki_a.k141_421408                                  1190  6 +     16235 tg---g--t--------------at
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                38522  6 +   3668941 TA---T--T--------------AT
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65572401  6 -  95554990 tg---a--t--------------at
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_771591                            15811  6 +     16181 TG---A--T--------------AT
i Nycticebus_coucang.k141_771591                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65680589  6 +  89412551 tg---a--t--------------at
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            5000388  6 -  23139505 TA---G--T--------------GG
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3691459  9 +  10294119 GAAACC--T--------------AT
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             685502  6 -   3126709 TG---G--T--------------AT
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1084142  6 +   1425656 TA---G--T--------------AT
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         42211  6 +     78940 ta---g--t--------------aT
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  130879  6 +    145789 TA---A--T--------------AG
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  43765  6 +     62360 TG---A--T--------------AG
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7228953  6 -   7562323 ta---g--t--------------at
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              64675  6 -     66828 tg---a--t--------------gt
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141884358  6 + 163896628 TA---G--T--------------AT
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      315660  6 -    505867 ta---t--t--------------at
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        5637  6 -     53940 tg---c--t--------------at
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18013606  6 -  38779656 TG---C--T--------------AT
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134083149  6 - 275406953 ta---g--g--------------aT
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      84383  6 +    140051 TA---G--G--------------AT
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127579012  6 - 205426864 TG---G--T--------------AT
i Pan_paniscus.CM003386.1                               C 0 I 38
s Pan_troglodytes.CM009241.2                            120156172  6 - 196562556 TG---G--T--------------AT
i Pan_troglodytes.CM009241.2                            C 0 I 38
s Panthera_onca.PanOnc_flattened_line_1615                  40396  6 +    295523 AG---G--T--------------AC
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3644211  6 +  18214204 ag---g--t--------------AC
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5033859  6 -   6340057 ag---g--t--------------aC
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1072020  6 -   1292953 ta---g--g--------------aT
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188160899  6 - 188283584 TG---G--A--------------AT
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              3989  6 +     25005 tg---g--a--------------at
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47518271  6 +  47705337 tg---g--a--------------at
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 72262  6 -    104429 tg---g--a--------------at
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   10794  6 +     14967 tg---g--a--------------at
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 6659  6 -      7628 tg---g--a--------------at
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    121878  6 -    135482 TG---G--T--------------AC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          11301  6 -     23713 tg---a--t--------------at
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           12452  6 +     61070 tg---a--t--------------at
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       2768  6 +     49596 TG---G--T--------------AT
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4955940  6 -   8017169 TG---A--T--------------AG
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              3420  6 +      8220 TA---G--T--------------AT
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306           100044  6 +    112873 TT---A--T--------------AT
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           9897  6 +     21690 GA---G--T--------------AT
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       26593  6 +     44506 TT---G--T--------------AT
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        26806  6 +     67491 TT---G--T--------------AT
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      17045  6 -     98129 TT---G--T--------------AT
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     26646  6 +    147771 TT---G--T--------------AT
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         3281  6 -     43940 TT---G--T--------------AT
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          7364  6 -     55515 TT---G--T--------------AT
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         26718  6 +    152463 TT---G--T--------------AT
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       4526  6 -    119457 TT---G--T--------------AT
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         16440  6 +    134592 TT---G--T--------------AT
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          27028  6 -     75465 TT---G--T--------------AT
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              191643  6 -    373494 TG---G--T--------------AT
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19812290  6 +  19899266 tg---g--t--------------at
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                4451  6 -      9567 TT---A--T--------------GT
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     22080  2 -     30946 -----------------------NN
i Propithecus_coquerelli.NW_012147863.1                 I 3 C 0
s Propithecus_edwardsi.k141_1317105                         40079  2 -     44753 -----------------------at
i Propithecus_edwardsi.k141_1317105                     I 4 C 0
s Prolemur_simus.MPIZ01000048.1                           6853270  3 +  12164890 TG---G-------------------
i Prolemur_simus.MPIZ01000048.1                         C 0 I 2
s Propithecus_coronatus.k141_1353159                         8354  3 +     11805 TG---G-------------------
i Propithecus_coronatus.k141_1353159                    C 0 I 3
s Propithecus_diadema.k141_577245                           47688  3 +     52369 TG---G-------------------
i Propithecus_diadema.k141_577245                       C 0 I 3
s Propithecus_perrieri.k141_7554                            21998  3 +     27322 TG---G-------------------
i Propithecus_perrieri.k141_7554                        C 0 I 3
s Propithecus_tattersalli.k141_907138                       21647  3 -     53241 TG---G-------------------
i Propithecus_tattersalli.k141_907138                   C 0 I 3
s Propithecus_verreauxi.k141_158021                         43910  3 -     48185 TG---G-------------------
i Propithecus_verreauxi.k141_158021                     C 0 I 3
s Psammomys_obesus.NESX01026517.1                           38723  6 +     77221 TG---G--T--------------GG
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            6592  6 -     27784 ta---c--t--------------gt
i Pteronotus_parnellii.KE867983.1                       C 0 I 1
s Pteronura_brasiliensis.PteBra_flattened_line_1343        250787  6 -    344369 TG---G--T--------------AT
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Puma_concolor.QAVW01000427.1                          131540508  6 - 161321710 ag---g--t--------------AC
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                21007  6 +     68503 TA---G--T--------------AT
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13918156  6 +  90463843 tG---A--T--------------AT
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1793086  6 +   2252614 tt---g--t--------------gT
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                      1416  6 -      4338 TA---G--T--------------AT
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15677050  6 -  43202129 TT---G--T--------------AT
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        8963  6 +     34089 TT---G--T--------------AT
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              8903  6 -     60842 TT---G--T--------------AT
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              8997  6 +     67014 TT---G--T--------------AT
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              8974  6 +     60816 TT---G--T--------------AT
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 8911  6 -     76454 TT---G--T--------------AT
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17345696  6 -  30362882 tt---g--t--------------at
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         25017  6 -     62485 tt---g--t--------------at
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   40059  6 -    114521 TG---G--T--------------TT
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  105932  6 -    120886 TG---A--T--------------AG
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            24039  6 +    739146 TG---A--T--------------AT
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17774262  6 -  27805282 AT---G--G--------------AT
i Sorex_araneus.JH798170.1                              C 0 I 1
s Spermophilus_dauricus.KZ294190.1                        2244547  6 +   2842873 tg---A--T--------------AT
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             239577  6 -    276980 TG---G--C--------------AT
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            33691  6 +     62062 TG---G--T--------------AC
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189275453  2 + 218635234 -----------------------ag
i Sus_scrofa.CM000824.4                                 I 2 I 1
s Symphalangus_syndactylus.tarseq_24                        19313  6 -  13920577 TG---G--T--------------AT
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                2826  6 +     20549 TT---A--T--------------AT
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               17818  6 +     45698 CG---T--T--------------AT
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      811296  6 +   1148477 TG---G--T--------------AT
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  61938  6 +     99546 TG---G--T--------------AT
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194012432  6 - 194193292 TG---G--A--------------AT
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                   896  6 -      3104 tg---g--t--------------at
i Tolypeutes_matacus.TolMat_scaffold_475685             C 0 I 101
s Tonatia_saurophila.TonSau_scaffold_3334                  138586  6 -    259118 TA---G--T--------------GT
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trichechus_manatus.JH594618.1                          16090341  6 +  31416278 tg---a--t--------------gt
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2801620  6 -   3938065 tg---g--t--------------at
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                   10443  6 +     13056 TG---G--T--------------AT
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69317683  6 -  96451834 ta---g--t--------------at
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                     528  6 +    136657 AG---G--T--------------TT
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 C 0
s Ursus_maritimus.KK498671.1                              6521210  6 +  28682327 TG---G--T--------------AT
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  9912  6 -     20643 tg---g--t--------------at
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             29447  6 -     33872 tg---g--t--------------at
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1528721  8 -   2331223 ta---gttt--------------at
i Vicugna_pacos.KN269600.1                              I 1 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                144887  6 -    281493 TA---T--T--------------AT
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       132044  6 -    134049 TA---G--T--------------AT
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        220359  6 -    227762 TG---G--T--------------AT
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_202118                     1537  6 -      3360 TG---T--T--------------GA
i Zapus_hudsonius.ZapHud_scaffold_202118                C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            2422  6 -     13665 TA---G--T--------------AT
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Petromus_typicus.PetTyp_scaffold_33007                    17492  0 -     36578 C
e Tragulus_javanicus.TraJav_scaffold_14717                   9488 743 +     90398 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Trachypithecus_pileatus.k141_532233                       30126  0 -     40754 I
e Trachypithecus_phayrei.ctg364                            232455  0 -   1198723 I
e Trachypithecus_obscurus.k141_411399                         131  0 +     12010 I
e Trachypithecus_melamera.k141_950981                        2232  0 -      3512 I
e Trachypithecus_leucocephalus.k141_352489                   1214  0 +      9423 I
e Trachypithecus_laotum.k141_897381                         45646  0 -     53586 I
e Trachypithecus_hatinhensis.k141_641377                     1240  0 +      1365 I
e Trachypithecus_germaini.k141_240878                        5067  3 -     24955 I
e Trachypithecus_geei.k141_137495                           30106  0 -     42322 I
e Trachypithecus_francoisi.k141_1012484                       874  0 +      8809 I
e Trachypithecus_cristatus.k141_968903                      32589  3 +     43409 I
e Trachypithecus_crepusculus.k141_863597                     4944  0 -     23436 I
e Trachypithecus_auratus.k141_672638                         4947  3 +     38635 I
e Tarsius_wallacei.k141_48636                               64696  0 +     65473 C
e Tarsius_lariang.k141_609102                               31387  0 +     42269 C
e Semnopithecus_vetulus.k141_748269                          4706  0 +     17284 I
e Semnopithecus_schistaceus.k141_628310                     45652  0 -     53123 I
e Semnopithecus_priam.k141_368201                           10107  0 -     20692 I
e Semnopithecus_johnii.k141_1300894                          1368  0 +     13764 I
e Semnopithecus_hypoleucos.k141_2141024                      1351  0 -      8815 I
e Semnopithecus_entellus.k141_1743075                       45578  0 +     45790 I
e Rhinopithecus_strykeri.ctg241                            462135  0 +   1472273 I
e Rhinopithecus_bieti.k119_554384                            2917  0 -     17045 C
e Pygathrix_nigripes_a.k141_758202                             3050  0 -      8240 I
e Pygathrix_nigripes_b.ctg25                                14340869  0 -  15297009 I
e Pygathrix_cinerea.k141_951151                              3033  0 -      8225 I
e Presbytis_mitrata.k141_1767317                            10996  0 +     15869 I
e Presbytis_comata.k141_678168                              11007  0 +     11126 I
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000342.1                3428480  0 -   4356645 I
e Piliocolobus_kirkii.k141_451083                            4879  0 -     13367 I
e Piliocolobus_gordonorum.k141_736355                       29715  0 +     67079 I
e Piliocolobus_badius.k141_512007                           29798  0 +     37672 I
e Nasalis_larvatus.k141_1382660                              4275  0 +      5784 I
e Colobus_polykomos.k141_1178012                               88  3 -     11758 I
e Colobus_guereza.LG08                                   96946830  0 - 156195979 I
e Colobus_angolensis.KN983490.1                            283936  0 +    886210 I
e Cephalopachus_bancanus.k141_702587                        12545  0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530  0 +    345090 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               18041 38 +    209709 CA-----AT-A---AA-GTTC-----CTGGAACACAGTAAG------T-TCTAA-----C----------------------A-----AA-TG
s Acinonyx_jubatus.LLWD01000356.1                         2039988 42 +   3721120 CA-----GT-A---CA-ATTT-----CTGGAACATAGTCAA------A-TTGTATAAATG----------------------T-----TA-G-
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    118343 32 -    189883 TG-----AC-C---TG-TA-T-----TTCTAATATAGTTAC------A-GCTAT-----C---------------------------------
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 I 10
s Ailuropoda_melanoleuca.LNAT01000321.1                  10663948 42 +  23371972 CA-----AC-A---TA-ATTT-----CTGGGACAtagtcaa------t-ttttataaatg----------------------t-----tg-g-
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7100474 42 -  16596857 CA-----GT-A---TA-ATTT-----CTGGGACATagtcaa------t-ttttataaatg----------------------t-----tg-g-
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_141108                   1726 38 -      7259 CA-----AC-A---GA-TATT-----TTGGAATATAATCAG------A-TCTAA-----C----------------------A-----AA-TG
i Allactaga_bullata.AllBul_scaffold_141108              C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   5915 38 -     60446 CA-----AT-A---AA-GTTT-----CTGGAACACAGTAAG------T-TCTAA-----C----------------------A-----AA-CG
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         6631 38 -     29318 ca-----at-a---aa-gttt-----ctggaacacagtaag------t-tctaa-----c----------------------a-----aa-cg
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         5569 38 +     38766 ca-----at-a---aa-gttt-----ctggaacacagtaag------t-tctaa-----c----------------------a-----aa-cg
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          6525 38 -     80423 ca-----at-a---aa-gttt-----ctggaacacagtaag------t-tctaa-----c----------------------a-----aa-cg
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              1509 38 +     19852 ca-----at-a---aa-gttt-----ctggaacatagaaag------t-tctaa-----c----------------------c-----ta-tg
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                3753 38 -     12443 ca-----at-a---aa-gttt-----ctggaacatagaaag------t-tctaa-----c----------------------c-----ta-tg
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                             1052 38 +      5070 ca-----at-a---aa-gttt-----ctggaacatagaaag------t-tctaa-----c----------------------c-----ta-tg
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                  797 38 -      1641 ca-----at-a---aa-gttt-----ctggaacatagaaag------t-tctaa-----c----------------------c-----ta-tg
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          3536 38 -     24210 ca-----at-a---aa-gttt-----ctggaacatagaaag------t-tctaa-----c----------------------c-----ta-tg
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           30118 38 -     30219 ca-----at-a---aa-gttt-----ctggaacatagaaag------t-tctaa-----c----------------------c-----ta-tg
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_405616                              5954 38 +     16794 ca-----at-a---aa-gttt-----ctggaacatagaaag------t-tctaa-----c----------------------c-----ta-tg
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                            1086 38 -      1470 ca-----at-a---aa-gttt-----ctggaacatagaaag------t-tctaa-----c----------------------c-----ta-tg
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             5231 38 -      9835 ca-----at-a---aa-gttt-----ctggaacatagaaag------t-tctaa-----c----------------------c-----ta-tg
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3526020 38 +   4113121 CA-----AT-A---CA-ATTT-----CTGGAATAT-----ATGCCAGT-CCTTA-----G----------------------A-----AG-C-
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      393039 38 -    631301 CA-----GT-A---TA-GTCT-----CTGGAACATAGGGCT------T-ATAAAT----G----------------------T-----TA-A-
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             3452 38 +     55446 CA-----AT-A---CA-ATTT-----CTGGAATAT-----ATGTCAGT-CATTA-----G----------------------A-----AG-C-
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 66841 38 +     78111 ca-----at-a---aa-gttt-----ctggaacacagaaag------t-tctaa-----c----------------------c-----ta-tg
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            9789 38 +     22701 CA-----AT-A---AA-GTTT-----CTGGAACACAGAAAG------T-TCTAA-----C----------------------C-----TA-TG
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5753745 38 +   9889416 CA-----AT-A---AA-GTTT-----CTGGAACACAGAAAG------T-TCTAA-----C----------------------C-----TA-Tg
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                            10344 38 -    104377 ca-----at-a---aa-gttt-----ctggaacacaggaag------t-tctaa-----c----------------------c-----ta-tg
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                              10351 38 +     23246 ca-----at-a---aa-gttt-----ctggaacacagGAAG------T-TCTAA-----C----------------------C-----TA-TG
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     3011 38 +     11424 CA-----AT-A---AT-AACT-----TTGGAATATAATCAG------T-TCCAA-----C----------------------A-----AA-CG
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        6934 38 +      9265 ca-----gt-a---aa-gttc-----ctggaacacagtcag------c-cctaa-----c----------------------a-----aa-tg
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                11448 37 -     29036 CA-----GT-A---TA-ATCT-----CT-GAACATAAAGCT------T-ATCAAT----G----------------------T-----TA-A-
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9543638 38 +  39197703 ca-----at-a---aa-gttt-----ctggaacatagaaag------t-tctaa-----c----------------------c-----ta-tg
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             64912 38 +     85812 ca-----at-a---aa-gtgt-----ctggaacatagaaag------t-tctaa-----c----------------------c-----ta-tg
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                15925 38 +     89302 ca-----at-a---aa-gtgt-----ctggaacatagaaag------t-tctaa-----c----------------------c-----ta-tg
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             20426 38 -     58268 ca-----at-a---aa-gttt-----ctggaacatagaaag------t-tctaa-----c----------------------c-----ta-tg
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             68420 38 +    119057 ca-----at-a---aa-gtgt-----ctggaacatagaaag------t-tctaa-----c----------------------c-----ta-tg
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              10389 38 -     25888 ca-----at-a---aa-gttt-----ctggaacatagaaag------t-tctaa-----c----------------------c-----ta-tg
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                11452 38 -     16375 ca-----at-a---ca-attc-----ctgcaacatagtcag------t-gttaa-----c----------------------a-----aa-tg
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               5068 38 +      6337 ca-----at-a---ca-attc-----ctgcaacatagtcag------t-gttaa-----c----------------------a-----aa-tg
i Avahi_peyrierasi.k141_798820                          I 3 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26384498 46 +  51448160 CA-----AT-A---CG-ATTT-----TTGGAACATATGTCA-G----T-CCTTA-----TA-AA-GA-AAG-----------C-----AA-G-
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        9671 46 -     13118 CA-----AT-A---CG-ATTT-----TTGGAACATATGTCA-G----T-CCTTA-----TA-AA-GA-AAG-----------C-----AA-G-
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   48484 38 -     72089 CA-----AT-A---CA-ATTT-----CTGGAATAT-----ATGTCAGT-CCTTA-----G----------------------A-----AG-C-
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   302623 38 -   6870073 CA-----AT-A---CA-ATTT-----CTGGAATAT-----ATGTCAGT-CCTTA-----G----------------------A-----AG-C-
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22956721 38 + 161108492 CA-----AT-A---CA-ATTT-----CTGGAATAT-----ATGTCAGT-CCTTA-----G----------------------A-----AG-C-
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     418962 38 +    998990 CA-----AT-A---CA-ATTT-----CTGGAATAT-----ATGTCAGT-CCTTA-----G----------------------A-----AG-C-
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22665375 38 + 158972876 CA-----AT-A---CA-ATTT-----CTGGAATAT-----ATGTCAGT-CCTTA-----G----------------------A-----AG-C-
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               675312 38 +   1914593 CA-----AT-A---CA-ATTT-----ATGTAATAT-----ATGTCAGT-CATTA-----G----------------------A-----AG-C-
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               118289 36 -    171031 CA-----AT-A---AA-GTTT-----CTGGAACAC--AAAG------T-TCTAA-----C----------------------C-----TA-TG
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 17309 36 +    125063 CA-----AT-A---AA-GTTT-----CTGGAACAC--AAAG------T-TCTAA-----C----------------------C-----TA-TG
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                19356 36 -    216513 CA-----AT-A---AA-GTTT-----CTGGAACAC--AAAG------T-TCTAA-----C----------------------C-----TA-TG
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       11899 36 -    134917 CA-----AT-A---AA-GTTT-----CTGGAACAC--AAAG------T-TCTAA-----C----------------------C-----TA-TG
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3223621 43 -   8989139 cA-----AT-A---CA-ATTT-----TTGGAACATATGTCA-G----T-CTTTA-----CA-AA--T--G------------T-----TA-G-
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           401322 43 -  15254737 ca-----aT-A---CA-GTTT-----TTGGAACATATGTCA-G----T-CTTTA-----TA-AA--T--G------------T-----Ta-g-
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2977059 43 +   6889770 ca-----AT-A---CA-ATTT-----TTGGAACATATGTCA-G----T-CTTTA-----CA-AA--T--G------------T-----TA-G-
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11526813 42 +  39901454 CA-----GT-A---TA-ATTT-----CTGGGACATAGTCAA------T-TTTTATAAATG----------------------T-----TA-G-
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   21787 42 +     87036 CA-----GT-A---TA-ATTT-----CTGGGACATAGTCAA------T-TTTTATAAATG----------------------T-----TA-G-
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11273496 42 -  35597290 ca-----GT-A---TA-ATTT-----CTGGGACATagtcaa------t-ttttataaatg----------------------t-----ta-g-
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11096207 42 +  39895921 ca-----GT-A---TA-ATTT-----CTGGGACATagtcaa------t-ttttataaatg----------------------t-----ta-g-
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16462992 42 -  44759192 ca-----GT-A---TA-ATTT-----CTGGGACATagtcaa------t-ttttataaatg----------------------t-----ta-g-
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21333964 38 + 157394656 CA-----AT-A---CA-ATTT-----CTGGAATAT-----ATGCCAGT-CCTTA-----G----------------------A-----AG-C-
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135712319 38 - 157403528 CA-----AT-A---CA-ATTT-----CTGGAATAT-----ATGCCAGT-CCTTA-----G----------------------A-----AG-C-
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_780116                    25 36 +      1571 CA-----AT-A---G---GAA-----GTGGACTATGGCCAG------T-TATAA-----A----------------------A-----TA-TG
i Capromys_pilorides.CapPil_scaffold_780116             C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               62462 37 +     67245 CA-----GT-A---TA-ATCT-----CT-GAACATAGTGCT------T-ATAAAT----G----------------------T-----TA-A-
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_1326                      471 36 -    202837 CA-----AT-A---GA-A--T-----TTGGAATAGAGTCAG------T-TCTAA-----C----------------------A-----GA-TG
i Castor_canadensis.CasCan_scaffold_1326                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   163126 42 -    276539 TA-----A--C---CA-ATAT-----TTAGAATGTACATCT-G----T-CCTTATAAAGG----------------------T-----TA-G-
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15790164 36 -  24422027 CA-----AT-A---A---GCT-----TTGGAATATTGACAC------T-TACAA-----C----------------------A-----AA-TG
i Cavia_aperea.AVPZ01000278.1                           I 3 C 0
s Cavia_porcellus.DS562889.1                             15802103 36 -  24440124 ca-----AT-A---A---GCT-----TTGGAATATTGACAC------T-TACAA-----C----------------------A-----AA-TG
i Cavia_porcellus.DS562889.1                            I 3 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       180275 36 +    436027 CA-----AT-A---A---GCT-----TTGGAATATTGACAC------T-TACAA-----C----------------------A-----AA-TG
i Cavia_tschudii.CavTsc_scaffold_488                    I 3 C 0
s Cebus_albifrons.Contig22                               18896014 38 -  29618158 ta-----at-a---aa-gttt-----ctggaacacagaaag------t-tctaa-----c----------------------c-----ta-tg
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                12664 38 -     26817 ta-----at-a---aa-gttt-----ctggaacacagaaag------t-tctaa-----c----------------------c-----ta-tg
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                16908 38 +     25043 ta-----at-a---aa-gttt-----ctggaacacagaaag------t-tctaa-----c----------------------c-----ta-tg
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4368321 38 +   7569818 ca-----gT-A---CA-ATTT-----CTGGAAGATAGTCCT------T-A--TA-AA-CG----------------------T-----Ta-g-
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         8078 38 -      9338 CA-----GT-A---CA-ATTT-----CTGGAAGATAGTCCT------T-A--TA-AA-CG----------------------T-----TA-G-
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6559855 38 +   6739814 ca-----at-a---aA-GTTT-----CTGGAACACAGTAAG------T-TCTAA-----C----------------------A-----AA-Tg
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      31332 38 +     60454 ca-----at-a---aa-gttt-----ctggaacacagtaag------t-tctaa-----c----------------------a-----aa-ca
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          6536 38 -     21101 ca-----at-a---aa-gttt-----ctggaacacagtaag------t-tctaa-----c----------------------a-----aa-tg
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         63846 38 -    107033 ca-----at-a---aa-gttt-----ctggaacacagtaag------t-tctaa-----c----------------------a-----aa-tg
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        6709 38 -     17608 ca-----at-a---aa-gttt-----ctggaacacagtaag------t-tctaa-----c----------------------a-----aa-cg
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          3874 38 +     45019 ca-----at-a---aa-gttt-----ctggaacacagtaag------t-tctaa-----c----------------------a-----aa-cg
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           4150 38 +     15177 ca-----at-a---aa-gttt-----ctggaacacagtaag------t-tctaa-----c----------------------a-----aa-cg
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          6756 38 +     16677 ca-----at-a---aa-gttt-----ctggaacacaataag------t-tctaa-----c----------------------a-----aa-cg
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           28946 38 +     35983 ca-----at-a---aa-gttt-----ctggaacacagtaag------t-tctaa-----c----------------------a-----aa-cg
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11995477 38 +  12117833 ca-----at-a---aa-gttt-----ctggaacacagtaag------t-tctaa-----c----------------------a-----aa-cg
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46482453 38 +  46592721 ca-----at-a---aa-gttt-----ctggaacacagtaag------t-tctaa-----c----------------------a-----aa-cg
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                        570 38 -     27215 ca-----at-a---aa-gttt-----ctggaacacagtaag------t-tctaa-----c----------------------a-----aa-cg
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       6770 38 +     35577 ca-----at-a---aa-gttt-----ctggaacacagtaag------t-tctaa-----c----------------------a-----aa-cg
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        6564 38 -     25661 ca-----at-a---aa-gttt-----ctggaacacagtaag------t-tctaa-----c----------------------a-----aa-cg
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        6736 38 -     17744 ca-----at-g---aa-gttt-----ctggaacacagtaag------t-tctaa-----c----------------------a-----aa-cg
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        26105 38 +     37128 ca-----at-a---aa-gttt-----ctggaacacagtaag------t-tctaa-----c----------------------a-----aa-cg
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           5156 30 -      6963 TA-----TT-A---CA-ATTT-----CTGGAACCTATTCTG------T-CAT-----------------------------------------
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      I 94 C 0
s Cheirogaleus_major.k141_1157592                           63661 38 -     68416 ca-----at-a---aa-gttc-----ctggaacatagtcgg------t-cctaa-----c----------------------a-----aa-tg
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                           12781 38 +     13308 ca-----at-a---aa-gttc-----ctggaacatagttgg------t-cctaa-----c----------------------a-----aa-tg
i Cheirogaleus_medius.k141_133808                       I 3 C 0
s Cheracebus_lucifer.k141_619653                             9950 38 -     18223 CA-----AT-A---AC-ATTT-----CTGGAACACAGAAAG------T-TCTAA-----C----------------------C-----TA-TG
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              1688 38 +    188999 CA-----AT-A---AC-GTTT-----CTGGAACACAGAAAG------T-TCTAA-----C----------------------C-----TA-TG
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           45987 38 +     57117 CA-----AT-A---AC-GTTT-----CTGGAACACAGAAAG------T-TCTAA-----C----------------------C-----TA-TG
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          50667 38 +     54541 CA-----AT-A---AC-GTTT-----CTGGAACACAGAAAG------T-TCTAA-----C----------------------C-----TA-TG
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15964861 36 +  43084221 TG-----AT-A---G---GTT-----TTGGAATATGGTTGG------T-TATAA-----A----------------------A-----ac-tg
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         75468 38 +    196370 ca-----at-a---aa-gttt-----ctggaacacagaaag------t-tctaa-----c----------------------c-----ta-tg
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          19649 38 +     40510 ca-----at-a---aa-gttt-----ctggaacacagaaag------t-tctaa-----c----------------------c-----ta-tg
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15144290 38 -  15256731 ca-----at-a---aa-gttt-----ctggaacacagtaag------t-tctaa-----c----------------------a-----aa-cg
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      38754 38 -     53260 ca-----at-a---aa-gttt-----ctggaacacagtaag------t-tctaa-----c----------------------a-----aa-cg
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101149313 38 + 101219884 CA-----AT-A---AA-GTTT-----CTGGAACACAGTAAG------T-TCTAA-----C----------------------A-----AA-CG
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                19185 36 -     21363 CC-----TG-A---CA-GTTT------GGGAGCATAATCAG------C-CCTTG-----T----------------------A-----AC-A-
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           764489 36 +    964067 CA-----TG-A---CA-GTTT------GGGAGCATAATCAG------C-CCTTG-----T----------------------A-----AC-A-
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_954668              1395 37 -      1738 CA-----AT-A---CA-GTTT-----CTGGAACATATTCAA------T-TCTTA-----T----------------------A-----CA-T-
i Chrysochloris_asiatica.ChrAsi_scaffold_954668         C 0 C 0
s Condylura_cristata.JH655880.1                          60622607 38 +  78930452 TA-----AT-C---CA-GTAA-----CTGGAGCACAAGCCA------TCTCTTT-----G----------------------T-----TA-A-
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         2985 38 -      5782 CA-----GT-A---CA-ATAT-----CTAGAACATAGTCCT------T-ATAAA----GG----------------------T-----TA-A-
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 283126 37 -    399297 TG-----AT-C---TA-TA-T-----TTGTAACATAGCTGT------A-GCTAA-----C----------------------A-----TT-CA
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53035475 37 +  72327488 CA-----AT-C---TA-TA-A-----TTGTAACAAAGTCAC------A-GCTAG-----C----------------------A-----TG-TA
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              2574 37 -     22648 CA-----AT-C---TG-CTTT-----TTGTCAAATGGTTTA------T-CCTTA-----G----------------------T-----GT-A-
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            57967 42 -     70449 CA-----GT-A---CA-ATAT-----CTGGAACATAGTCAA------A-TTTTATAAATG----------------------T-----TA-G-
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  214745 39 -    956709 CA-----AT-A---GGTATTT-----TTGGAATAGGGGTAG------T-TTTAA-----C----------------------A-----AA-TG
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 36412 35 -     67205 CA-----GT-A---G---AAC-----TTGGACTAGGGGCAG------T-TATAA-----A----------------------A------A-TG
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                21351 35 +     26546 CA------T-A---A---GCT-----TTGGCATATGGTCAG------T-TATAA-----C----------------------A-----AA-TG
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             62491 36 -    236241 CA-----AT-A---G---GCT-----TTAGAATATAGTCAG------T-TATAA-----C----------------------A-----AA-CA
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          186226 33 -   6883506 ta--tCATT-A---TA-ATTT-----ATGGGACCTTTTCAA------T-CAT-----------------------------------------
i Dasypus_novemcinctus.JH568778.1                       I 105 C 0
s Daubentonia_madagascariensis.ctg11                     16849613 38 +  31942871 aa-----at-a---aa-tttc-----ctggaacatagtcag------t-cctaa-----c----------------------a-----aa-tg
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80041101 46 -  96802777 CA-----AT-A---CA-ATTT-----TTGGAACATATGTCA-G----T-CCTTA-----TA-AACGA-AG------------A-----AA-G-
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18701674 38 -  18957592 CA-----GT-G---TA-ATCT-----CTGGAACATAGTTCT------T-ACAAAT----G----------------------T-----TA-G-
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 326723 38 +    993696 CA-----GT-A---CA-ATTT-----CTGGAAGATAGTCCT------T-A--TA-AA-CG----------------------T-----ca-g-
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   7355 38 +    151128 CA-----GT-A---CA-ATTT-----CTGGAAGATAGTCCT------T-A--TA-AA-CG----------------------T-----TA-G-
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   160109 36 +    228994 TG-----AT-A---G---CTT-----TTAAAATATGATCAG------T-TATAG-----A----------------------A-----AC-TA
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3660778 38 +   4240102 TA-----AT-A---GA-GATT-----TTGGAATATAGTCAG------T-TCTAA-----C----------------------A-----AA-TG
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  3152 38 -     11986 TA-----AT-A---GA-GATT-----TTGGAATATAGTCAG------T-TCTAA-----C----------------------A-----AA-TG
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                41065 36 -     73477 CA-----AT-A---A---GCT-----TTGGAATATGGACAC------T-TATAA-----C----------------------A-----AA-TG
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           23000389 37 -  44670279 ca-----at-a---ca-gttt-----ctggaacatatccaa------t-tctta-----t----------------------a-----aa-t-
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1496701 38 +   1727528 CA-----AT-A---CA-ATTT-----CTGGAATAT-----ATGTCAGT-CCTTA-----G----------------------A-----AG-C-
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7834643 37 +  15467074 ca-----AT-A---AA-GCTC-----CTGGAACATATTCAA------T-TCTTA-----T----------------------A-----AA-T-
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        244288 37 -    369425 CA-----AT-C---TA-TA-T-----TTGTAACAAAGTCAG------A-GTTAA-----C----------------------A-----TA-CA
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01076532.1                            619 37 +      9159 CA-----AT-C---TA-TA-T-----TTGTAACAAAGTCAG------A-ATTAA-----C----------------------A-----TG-CA
i Ellobius_talpinus.LOJH01076532.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85877937 42 +  99434291 CA-----AT-A---TA-ATTT-----CTGGGACATagtcaa------t-ttttataaatg----------------------t-----tg-a-
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4709434 38 +   6522550 ca-----at-a---CA-ATCT-----CTGGAATATAGTTCT------T-ATAAAT----G----------------------T-----TA-A-
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5856815 38 -   7175178 ca-----at-a---ca-attt-----ctggaacacagtcct------t-a--ta--aatg----------------------t-----ta-g-
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13355301 38 +  41866177 ca-----at-a---ca-attt-----ctggaacacagtcct------t-a--ta--aatg----------------------t-----ta-g-
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          16791 38 +     92910 ca-----at-a---ca-attt-----ctggaacacagtcct------t-a--ta--aatg----------------------t-----ta-g-
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11541743 38 +  16010500 TC-----AT-C---CA-ATGT-----CTGGAGCTGGGTCCA------T-GCTTA-----G----------------------C-----TTAG-
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48781323 38 -  48907691 ca-----at-a---aa-gttt-----ctggaacacagtaag------t-tctaa-----c----------------------a-----aa-cg
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          319341 46 +    330699 CA-----AT-A---CG-ATTT-----TTGGAATATATGTCA-G----T-CCTTA-----TA-AA-GG-AAG-----------A-----AA-G-
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             65798 46 +     89355 CA-----AT-A---CA-ATTT-----TTGGAACATATGTCA-G----T-CCTTA-----TA-AA-G---G---------AAAA-----AA-G-
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              9761 34 +     13586 CA-----AT-A---AA-GTTC-----CTGGAACAT----AG------T-GTTAA-----C----------------------A-----AA-TG
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_1015201                              3020 34 -      4292 CA-----AT-A---AA-GTTC-----CTGGAACAT----AG------T-GTTAA-----C----------------------A-----AA-TG
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            16157 34 +     36558 CA-----GT-G---AA-GTTC-----CTGGAACAT----AG------T-GTTAA-----C----------------------A-----AA-TG
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            12479 34 +     60246 ca-----at-g---aa-gttc-----ctggaacat----ag------t-gttaa-----c----------------------a-----aa-tg
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                15964 34 +    109717 ca-----at-a---aa-gttc-----ctggaacat----ag------t-gttaa-----c----------------------a-----aa-tg
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 3947 34 -     19505 CA-----AT-G---AA-GTTC-----CTGGAACAT----AG------T-GTTAA-----C----------------------A-----AA-TG
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                20622 34 +     27497 CA-----AT-A---AA-GTTC-----CTGGAACAT----AG------T-GTTAA-----C----------------------A-----AA-TG
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           23078 34 +     26808 CA-----AT-G---AA-GTTC-----CTGGAACAT----AG------T-GTTAA-----C----------------------A-----AA-TG
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                37810 34 +     46535 CA-----AT-G---AA-GTTC-----CTGGAACAT----AG------T-GTTAA-----C----------------------A-----AA-TG
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              20551 34 -     29447 CA-----AT-A---AA-GTTC-----CTGGAACAT----AG------T-GTTAA-----C----------------------A-----AA-TG
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129899408 42 - 159252932 CA-----GT-A---CA-ATTT-----CTGGAACATAGTCAA------A-TTGTATAAATG----------------------T-----TA-G-
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129286383 42 - 158578461 CA-----GT-A---CA-ATTT-----CTGGAACATAGTCAA------A-TTGTATAAATG----------------------T-----TA-G-
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 27482 42 +     52776 CA-----GT-A---CA-ATTT-----CTGCAACATAGTCAA------A-TTGTATAAATG----------------------T-----TA-G-
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13896631 36 -  19261668 TA-----C-CG---A---AGT-----TTGGGATATGGTCAG------T-GATAA-----C----------------------C-----AA-CG
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     215781 38 -    847004 ca-----gt-a---aa-gttc-----ctggaacacagtcag------c-cctaa-----c----------------------a-----aa-tg
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           18142 38 -     43889 ca-----gt-a---aa-gttc-----ctggaacacagtcag------c-cctaa-----c----------------------a-----aa-tg
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          15286 38 +     27357 ca-----gt-a---aa-gttc-----ctggaacacagtcag------c-cctaa-----c----------------------a-----aa-tg
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               160060 38 +    324696 ca-----at-a---ga-gtat-----ctggaacatagtaag------t-cccaa-----c----------------------a-----aa-tg
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 I 3
s Giraffa_tippelskirchi.LVKQ01S012154.1                    186476 38 -    189561 CA-----GT-A---CA-ATTT-----TGGGAATAT-----ATATCAGT-CCTTA-----G----------------------A-----Ag-c-
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           16958 38 -     18683 CA-----AT-A---GA-GTTT-----TTGGAATATAGCCAG------T-TCTAA-----C----------------------A-----AA-TG
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               9739 38 -     14630 CA-----AT-A---AA-GTTT-----CTGGAACCCAGTAAG------T-TCTAA-----C----------------------A-----AA-TG
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119656839 38 - 195582420 ca-----at-a---aa-gttt-----ctggaacccagtaag------t-tctaa-----c----------------------a-----aa-tg
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   80273 38 +    118900 CA-----AT-A---AA-GTAT-----TTGGAATATAGCCAG------T-TCTAA-----C----------------------A-----AA-TG
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         6549 38 +     10286 ca-----gt-a---aa-gttc-----ctggaacatagtcaa------t-gttaa-----c----------------------a-----aa-tg
i Hapalemur_alaotrensis.k141_1280836                    I 2 C 0
s Hapalemur_gilberti.k141_279011                             5027 38 -     11661 ca-----gt-a---aa-gttc-----ctggaacatagtcaa------t-gttaa-----c----------------------a-----aa-tg
i Hapalemur_gilberti.k141_279011                        I 2 C 0
s Hapalemur_griseus.k141_1387522                            10354 38 +     56096 ca-----gt-a---aa-gttc-----ctggaacatagtcaa------t-gttaa-----c----------------------a-----aa-tg
i Hapalemur_griseus.k141_1387522                        I 2 C 0
s Hapalemur_meridionalis.k141_186231                        33603 38 -     42470 ca-----gt-a---aa-gttc-----ctggaacatagtcaa------t-gttaa-----c----------------------a-----aa-tg
i Hapalemur_meridionalis.k141_186231                    I 2 C 0
s Hapalemur_occidentalis.k141_797938                        50226 38 -     54384 ca-----gt-a---aa-gttc-----ctggaacatagtcaa------t-gttaa-----c----------------------a-----aa-tg
i Hapalemur_occidentalis.k141_797938                    I 2 C 0
s Helogale_parvula.HelPar_flattened_line_22962              23105 42 +     53719 CA-----GA-A---CA-ATAT-----CTTGAACATAGTCAA------A-TTTTATAAATG----------------------T-----TA-G-
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                33369 38 -     91191 CA-----AT-A---TA-ATTT-----CTGGAATAT-----ATGCCAGT-CCTTA-----G----------------------A-----AG-C-
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2561124 39 +  31725842 TA-----T-CATTAG---ATT-----TTGGAATATGGTCAG------T-TATAA-----C----------------------A-----AA-TG
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               63351 37 +     73687 ca-----at-a---ca-gttt-----ctggaacttattcaa------t-tcttg-----t----------------------a-----aa-t-
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              151130 46 +    277961 CA-----AT-G---TA-ATTT-----TTGGAACATATGTCA-G----T-CCTTA-----TG-AA-GG-AAG-----------A-----AA-G-
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001052.1                      277605 38 -    479840 CA-----AT-A---TA-ATTT-----CTAGGACATAGTCCT------T-ACAAAT----G----------------------T-----TA-A-
i Hipposideros_armiger.JXIK01001052.1                   C 0 n 0
s Hipposideros_galeritus.HipGal_scaffold_52959               1285 38 +     26078 CA-----AT-A---CA-GTTT-----CTAGAACATAGTCCT------T-ATAAAT----G----------------------T-----CT-A-
i Hipposideros_galeritus.HipGal_scaffold_52959          I 28 I 1471
s Hoolock_leuconedys.ctg79                                      9654 38 -   7690867 ca-----at-a---aa-gttt-----ctggaacacagtaag------t-tctaa-----c----------------------a-----aa-tg
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 23578 42 -     67322 CA-----GT-A---CA-ATAT-----CTGGAACATAGTCAA------A-TTTTATAAATG----------------------T-----TA-C-
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           21726 36 -    119109 CA-----AT-A---A---GCT-----TTGGAATATGGACAC------T-TAAAA-----C----------------------A-----AA-TG
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_1816750                             2225 38 +      3202 CA-----AT-A---AA-GTTT-----CTGGAACACAGTAAG------T-TCTAA-----C----------------------A-----AA-TG
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1136966                               234 38 +      9785 CA-----AT-A---AA-GATT-----CTGGAACACAGTAAG------T-TCTAA-----C----------------------A-----AA-TG
i Hylobates_agilis.k141_1136966                         C 0 C 0
s Hylobates_klossii.k141_468230                              3714 38 +      5464 CA-----AT-A---AA-GTTT-----CTGGAACACAGTAAG------T-TCTAA-----C----------------------A-----AA-TG
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14629060 38 -  25970782 CA-----AT-A---AA-GTTT-----CTGGAACACAGTAAG------T-TCTAA-----C----------------------A-----AA-TG
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            1612 38 +      4161 CA-----AT-A---AA-GTTT-----CTGGAACACAGTAAG------T-TCTAA-----C----------------------A-----AA-TG
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             37168 38 -     60944 CA-----AT-A---AA-GTTT-----CTGGAACACAGTAAG------T-TCTAA-----C----------------------A-----AA-TG
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                    10030 36 +     22540 CA-----AT-A---G---TTT-----TGGGAATATGGTCAT------T-TATAA-----G----------------------A-----AA-TG
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7130852 38 +  13083262 CA-----AT-A---GA-GATT-----TTGGAATACAGTCAG------T-TCCAA-----C----------------------A-----AA-TG
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   2069 38 +      3484 ca-----gt-a---aa-attc-----ctggaacatagtcag------t-gttaa-----c----------------------a-----aa-tg
i Indri_indri.k141_2197838                              I 3 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              13329 46 +     17520 CA-----AT-A---CA-ATTT-----TTGGAACATATGTCA-G----T-CCTTG-----TA-AA-GG-AAG-----------A-----AA-G-
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8579465 38 +  11848649 CA-----AT-A---GG-TATT-----TTGGAATATAGTCAG------A-TCTAA-----A----------------------A-----AA-GA
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               27948 46 +     37189 CA-----AT-A---CA-ATTT-----TTGGAACATATGTCA-G----T-CCTTA-----TA-AA-GG-AAG-----------A-----AA-G-
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          54509 38 -    147782 CA-----AT-A---AA-GTTT-----CTGGAACATAGAAAG------T-TCTAA-----C----------------------C-----TA-TG
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    6029 25 +     26176 CA-----AT-A---CA-AT------------------TTCT------T-ATCAAT----G----------------------T-----TA-A-
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258411901 38 - 285822530 ca-----gt-a---aa-gttc-----ctggaacatagtcaa------t-gttaa-----c----------------------a-----aa-tg
i Lemur_catta.scaffold_1                                I 2 C 0
s Lepilemur_ankaranensis.k141_884009                        29211 24 +     39228 CA-----AT-A---AA-GTTC-----CTGGAACATAGTC------------------------------------------------------
i Lepilemur_ankaranensis.k141_884009                    I 3 I 10
s Lepilemur_dorsalis.k141_134267                            58575 24 +     63517 CA-----AT-A---AA-ATTC-----CTGGAACATAGTC------------------------------------------------------
i Lepilemur_dorsalis.k141_134267                        I 3 I 10
s Lepilemur_ruficaudatus.k141_574529                        36955 24 -     38897 CA-----AT-A---AA-GTTC-----CTGGAACATAGTC------------------------------------------------------
i Lepilemur_ruficaudatus.k141_574529                    I 3 I 10
s Lepilemur_septentrionalis.k141_710646                      3001 24 -     13103 CA-----AT-A---AA-GTTC-----CTGGAACATAGTC------------------------------------------------------
i Lepilemur_septentrionalis.k141_710646                 I 3 I 10
s Leptonychotes_weddellii.KB714749.1                      3091910 42 -   3498232 TA-----AT-A---TA-ATTT-----CTGGGACAtagtcaa------t-ttttataaatg----------------------t-----ta-g-
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    21347 34 +     22452 CA-----AC-A---GA-ATTT-----CTGGAACATA----A------T-ACTAA-----T----------------------A-----AA-GG
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            140263 46 +   3060487 CA-----AT-A---CA-ATTT-----TTGGAACATATGTCA-G----T-CCTTA-----TA-AA-GG-AAG-----------A-----AA-G-
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19252944 38 +  19376315 ca-----at-a---aa-gttt-----ctggaacacagtaag------t-tctaa-----c----------------------a-----aa-cg
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           15744 38 +     84689 ca-----gt-a---aa-gttc-----ctagaatgcagtcag------c-cctaa-----c----------------------g-----aa-tg
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3783482 38 +   6799190 ca-----gt-a---aa-gttc-----ctagaatgcagtcag------c-cctaa-----c----------------------g-----aa-tg
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20599276 37 -  62548349 ca-----at-a---ta-gttt-----ctgggatacattcaa------t-cctta-----t----------------------a-----aa-t-
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11095663 42 +  39895028 ca-----GT-A---TA-ATTT-----CTGGGACATagtcaa------t-ttttataaatg----------------------t-----ta-g-
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             24695 38 +     74745 CA-----AT-A---AA-GTTT-----CTGGAACACAGTAAG------T-TCTAA-----C----------------------A-----AA-CG
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12711156 38 +  12821369 CA-----AT-A---AA-GTTT-----CTGGAACACAGTAAG------T-TCTAA-----C----------------------A-----AA-CG
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                3729 38 -     26467 CA-----AT-A---AA-GTTT-----CTGGAACACAGTAAG------T-TCTAA-----C----------------------A-----AA-CG
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           51600 38 +     63263 CA-----AT-A---AA-GTTT-----CTGGAACACAGTAAG------T-TCTAA-----C----------------------A-----AA-CG
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 3710 38 -     26361 CA-----AT-A---AA-GTTT-----CTGGAACACAGTAAG------T-TCTAA-----C----------------------A-----AA-CG
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 6900 38 -      7381 CA-----AT-A---AA-GTTT-----CTGGAACACAGTAAG------T-TCTAA-----C----------------------A-----AA-CG
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  50129 38 -     79256 CA-----AT-A---AA-GTTT-----CTGGAACACAGTAAG------T-TCTAA-----C----------------------A-----AA-CG
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196040227 38 + 196197964 CA-----AT-A---AA-GTTT-----CTGGAACACAGTAAG------T-TCTAA-----C----------------------A-----AA-CG
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11450397 38 +  11645122 CA-----AT-A---AA-GTTT-----CTGGAACACAGTAAG------T-TCTAA-----C----------------------A-----AA-CG
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   9083 38 -     46448 CA-----AT-A---AA-GTTT-----CTGGAACACAGTAAG------T-TCTAA-----C----------------------A-----AA-CG
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                6746 38 -     13212 CA-----AT-A---AA-GTTT-----CTGGAACACAGTAAG------T-TCTAA-----C----------------------A-----AA-CG
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 20426 38 -     55006 CA-----AT-A---AA-GTTT-----CTGGAACACAGTAAG------T-TCTAA-----C----------------------A-----AA-TG
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43845541 38 +  43892939 CA-----AT-A---AA-GTTT-----CTGGAACACAGTAAG------T-TCTAA-----C----------------------A-----AA-CG
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               21710 38 -     24607 CA-----AT-A---AA-GTTT-----CTGGAACACAGTAAG------T-TCTAA-----C----------------------A-----AA-CG
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               9080 38 -     27140 CA-----AT-A---AA-GTTT-----CTGGAACACAGTAAG------T-TCTAA-----C----------------------A-----AA-CG
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43442116 38 -  43563597 ca-----at-a---aa-gttt-----ctggaacacagtaag------t-tctaa-----c----------------------a-----aa-cg
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4454920 38 -   4543643 ca-----at-a---aa-gttt-----ctggaacacagtaag------t-tctaa-----c----------------------a-----aa-cg
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            152634 21 +    252755 ---------------A-ATTT-----TTGGAACATAGTCCA------G---------------------------------------------
i Manis_javanica.JSZB01003966.1                         I 1 I 8
s Manis_pentadactyla.KN017078.1                             40228 21 +     58827 ---------------A-ATTT-----TTGGAACATAGTCCA------G---------------------------------------------
i Manis_pentadactyla.KN017078.1                         I 1 I 8
s Marmota_marmota.CZRN01000005.1                         36878719 38 +  64221397 CA-----AT-A---GA-GATT-----TTGGAATACAGTCAG------T-TCCAA-----C----------------------A-----AA-TG
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       66071 20 -    234502 CA-----AT-A---CA-ATTT-----CTGGAACGT----------------------------------------------------------
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 I 10
s Mellivora_capensis.MelCap_flattened_line_15433             7040 42 -     87323 CA-----AT-A---TA-ATTT-----CTGGGACATAGTCAA------T-TTTTATAAATG----------------------T-----TG-A-
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 1741 55 +    115071 TG-----AG-T---TA-TA-T-----TTGTAATATAGTCAC------A-GCTAA-----CA-AA-AT-AGGTT-CTacacaca-----tg-gt
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 I 770
s Mesocricetus_auratus.KB708139.1                         1051999 37 -  26018355 CA-----AT-C---TA-TA-A-----TTATAGCAAAGTCAC------A-GCTAG-----C----------------------A-----TA-TA
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    2920 46 -     12939 CA-----AT-A---CA-ATTT-----TTGGAACATATGTCA-G----T-CCTTA-----TA-AA-GG-AAG-----------A-----AA-G-
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16514932 38 +  47401472 CA-----AT-A---AA-GTTC-----CTGGAACATAGTCAG------T-CCTAA-----C----------------------A-----AA-TG
i Microcebus_murinus.CM007691.1                         I 3 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  41957 37 -     48017 ca-----at-a---ta-gttt-----ctggaatacatccaa------t-cttta-----t----------------------a-----aa-t-
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               25422 38 -     32043 CA-----GT-G---TA-ATCT-----CCAGAACATAGTTCT------T-ATAAAT----G----------------------T-----TA-A-
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22825086 37 -  98408828 CA-----AT-C---TA-TA-T-----TTGTAACAAAGTCAG------A-GTTAA-----C----------------------A-----TA-CA
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8213476 38 +  10048721 ca-----gT-A---CA-ATCC-----CTGGAACATACTTCT------T-GTAAAT----G----------------------T-----TA-A-
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            37967 38 +     45743 CA-----GT-A---CA-ATCC-----CTGGAACATACTTCT------T-GTAAAT----G----------------------T-----TA-A-
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         6662 38 +     29742 ca-----at-a---aa-gttt-----ctggaacacagtaag------t-tctaa-----c----------------------a-----aa-tg
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        17406 42 -    104932 TA-----AT-A---TA-ATTT-----CTGGGACATAGTCAA------T-TTTTATAAATG----------------------T-----TA-G-
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     5615 38 -     12809 ca-----at-a---aa-gttc-----ctggaacatagtcag------t-cttaa-----c----------------------a-----aa-tg
i Mirza_zaza.k141_593947                                I 3 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 150694 46 +    154973 CA-----AT-A---CA-ATTT-----TTGGAACATATGTCA-G----T-CCTTA-----TA-AACGA-AG------------A-----AA-G-
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                163945 38 +    265003 CA-----GT-A---TA-GTCT-----CTGGAACATAGTTCT------T-TTAAAT----G----------------------T-----TA-A-
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  6718 38 -     19904 CA-----GT-A---CA-ATTT-----CTGGAATAT-----ATGTCAGT-CCTTA-----G----------------------A-----AG-C-
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  150782 42 -    168139 CA-----GA-A---CA-ATAT-----CTTGAACATAGTCAA------A-TTTTATAAATG----------------------T-----TA-G-
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          24891 38 -    100666 CA-----AT-A---CA-ATCT-----CTTGAATATAGTTCT------T-ACAAAT----G----------------------T-----TA-A-
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70772323 59 +  92629107 ta-----ac-c---tc-ta-ttttt-ttttaacatggacaC------A-GCTAA-----CA-CA-CG-AGG-CCCTCTAAACA-----TA-CA
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75494377 60 +  98207768 TA-----Ac-c---gc-ta-ttttttttttagcatggaCAC------A-GCTAA-----CA-CA-CG-AGGT-CCTCTAAACA-----TA-CA
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67561131 57 +  89017189 TA-----AC-C---TC-TA-T---TTTTTTAGCATGCGCAC------A-GCTAA-----CA-CA--TGACGT-CCTCTAAACA-----TA-CA
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74337101 59 +  97876770 Ta-----ac-c---tc-ta-ttttt-tttaagcatgGACAC------A-GCTAA-----CACAA-G--AGGT-CCTCTAAACA-----TA-CA
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             15362 37 +     98495 ta-----at-a---ga-g-tt-----tgggaatatagccag------t-tctca-----c----------------------a-----aa-tg
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4429146 42 -  28371801 CA-----AT-A---TA-ATTT-----CTGGGacatagttaa------t-ttttataaatg----------------------t-----tg-a-
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     96128 36 -    117718 CA-----AT-A---G---GAC-----TTGGACTATGGCCCA------T-TATAA-----A----------------------A-----TA-TG
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               971769 38 +   8389877 ca-----at-a---CA-ATCT-----CTGGAATATAGTTCT------T-ATAAAT----G----------------------T-----TA-A-
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5023183 38 +   6462685 ca-----aT-A---CA-ATCT-----CTGGAATATAGTTCT------T-ATAAAT----G----------------------T-----TT-A-
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3469275 38 -   3747815 ca-----at-a---cA-ATCT-----CTGGAATATAGTTCT------T-ATAAAT----G----------------------T-----TA-A-
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        14508 38 +     66751 CA-----AT-A---CA-ATCT-----CTGGAATATAGTTCT------T-ATAAAT----G----------------------T-----TA-A-
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             8151 37 -      8794 CA-----TT-A---CA-GTTT-----CTGGAGCATATTTAG------T-CCTTG-----T----------------------A-----AT-G-
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            241743 33 -    362372 CA-----AT-A---G-----T-----TTGTAATACAGTCAG------A-TCTAA-----C----------------------A-----AG-C-
i Nannospalax_galili.KL201303.1                         C 0 n 0
s Neomonachus_schauinslandi.NINY01007774.1                4490804 42 -  14209539 TA-----AT-A---TA-ATTT-----CTAGGACAtagtcaa------t-ttttataaatg----------------------t-----ta-g-
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3955285 46 -   4490290 CA-----AT-A---CA-ATTT-----TTGGAACACATGTCA-G----T-CCTTA-----TA-AACGA-AG------------A-----AA-G-
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  51019 42 +     94413 ACGATC-AT-A---TA-ATCT-----CCGGAACATAGTTCT------T-GTAGAT----G----------------------T-----TC-A-
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_762468                             731 38 -      2755 ca-----at-a---aa-gttt-----ctggaacacagtaag------t-tctaa-----c----------------------a-----aa-tg
i Nomascus_annamensis.k141_762468                       C 0 C 0
s Nomascus_concolor.k141_256540                              7343 38 -      8966 ca-----at-a---aa-gttt-----ctggaacacagtaag------t-tctaa-----c----------------------a-----aa-tg
i Nomascus_concolor.k141_256540                         C 0 C 0
s Nomascus_gabriellae.k141_1400361                           1282 38 -      2203 ca-----at-a---aa-gttt-----ctggaacacagtaag------t-tctaa-----c----------------------a-----aa-tg
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_453                             6594 38 +     12787 ca-----at-a---aa-gttt-----ctggaacacagtaag------t-tctaa-----c----------------------a-----aa-tg
i Nomascus_siki_b.tarseq_453                        C 0 C 0
s Nomascus_siki_a.k141_421408                                  1196 38 +     16235 ca-----at-a---aa-gttt-----ctggaacacagtaag------t-tctaa-----c----------------------a-----aa-tg
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                38528 42 +   3668941 CA-----GT-A---TA-ATTT-----CTGGGACATagtcaa------t-ttttataaatg----------------------t-----ta-g-
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65572407 38 -  95554990 ca-----gc-a---aa-gttc-----ctggaacacagtcag------c-cctaa-----c----------------------g-----aa-tg
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_771591                            15817 38 +     16181 CA-----GC-A---AA-GTTC-----CTGGAACACAGTCAG------C-CCTAA-----C----------------------G-----AA-TG
i Nycticebus_coucang.k141_771591                        C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65680595 38 +  89412551 ca-----gc-a---aa-gttc-----ctggaacacagtcag------c-cctaa-----c----------------------g-----aa-tg
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            5000394 34 -  23139505 CA-----AC-G---AA-ATTT-----CTGAACCATT----C------A-GCTAA-----C----------------------A-----AA-TA
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3691468 36 +  10294119 CA-----AT-A---G---GAC-----TTGGACTATGGTCAG------T-TGTAA-----A----------------------A-----AA-TG
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             685508 42 -   3126709 TA-----AT-A---TA-ATTT-----CTGGGACATAGTCAA------T-TTTTATAAGCA----------------------T-----ta-g-
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1084148 38 +   1425656 CA-----AT-A---CA-ATTT-----CTGGAATAT-----ATGTCAGT-CCTTA-----G----------------------A-----AG-C-
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         42217 38 +     78940 CA-----AT-A---CA-ATTT-----CTGGAATAT-----ATATCAGT-CCTTA-----G----------------------A-----Ag-c-
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  130885 37 +    145789 CA-----AT-C---TA-TA-T-----TTGAAACAAAGTCAG------A-GTTAA-----C----------------------A-----TA-CA
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  43771 34 +     62360 CA-----GT-C---TA-TA-T-----TTGTAACAT---CAC------A-GCAAA-----C----------------------A-----TA-CG
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7228959 46 -   7562323 CA-----AT-A---CA-ATTT-----TTGGAACATATGTCA-G----T-Cctta-----t-----------aaagga-a--ga-----aa-a-
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              64681 37 -     66828 ca-----at-a---ta-gttt-----ctggaacatattcaa------t-cctta-----t----------------------a-----aa-t-
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141884364 34 + 163896628 CA-----AC-A---GA-ATTT-----CTGGAACATA----A------T-ACTAA-----C----------------------A-----AA-GG
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      315666 42 -    505867 ca-----GC-A---TA-ATTT-----CTGGGACATagtcaa------t-ttttataaatg----------------------t-----ta-g-
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        5643 38 -     53940 ca-----gt-a---aa-gttc-----ctggaacacagtcag------c-cccaa-----c----------------------a-----aa-tg
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18013612 38 -  38779656 CA-----GT-A---AA-GTTC-----CTGGAACACAGTCAG------C-CCCAA-----C----------------------A-----AA-TG
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134083155 38 - 275406953 CA-----AT-A---CA-ATTT-----CTGGAATAT-----ATGCCAGT-CCTTA-----G----------------------A-----AG-C-
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      84389 38 +    140051 CA-----AT-A---TA-ATTT-----CTGGAATAT-----ATGCCGGT-CCTTA-----G----------------------A-----AG-C-
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.AJFE02000020.1                                  51 38 -      1352 CA-----AT-A---AA-GTTT-----CTGGAACACAGTAAG------T-TCTAA-----C----------------------A-----AA-TG
i Pan_paniscus.AJFE02000020.1                           n 38 I 81
s Pan_troglodytes.KZ622857.1                               333945 38 +    772158 CA-----AT-A---AA-GTTT-----CTGGAACACAGTAAG------T-TCTAA-----C----------------------A-----AA-TG
i Pan_troglodytes.KZ622857.1                            I 53 I 26
s Panthera_onca.PanOnc_flattened_line_1615                  40402 42 +    295523 CA-----GT-A---CA-ATTT-----CTGGAACATAGTCAA------A-TTGTATAAATG----------------------T-----TA-G-
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3644217 42 +  18214204 CA-----GT-A---CA-ATTT-----CTGGAACATAGTCAA------A-TTGTATAAATG----------------------T-----TA-G-
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5033865 42 -   6340057 CA-----GT-A---CA-ATTT-----CTGGAACATAGTCAA------A-TTGTATAAATG----------------------T-----TA-G-
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1072026 38 -   1292953 CA-----AT-A---CA-ATTT-----CTGGAATAT-----ATGCCAGT-CCTTA-----G----------------------A-----AG-C-
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188160905 38 - 188283584 CA-----AT-A---AA-GTTT-----CTGGAACACAGTAAG------T-TCTAA-----C----------------------A-----AA-CG
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              3995 38 +     25005 ca-----at-a---aa-gttt-----ctggaacacagtaag------t-tctaa-----c----------------------a-----aa-cg
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47518277 38 +  47705337 ca-----at-a---aa-gttt-----ctggaacacagtaag------t-tctaa-----c----------------------a-----aa-cg
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 72268 38 -    104429 ca-----at-a---aa-gttt-----ctggaacacagtaag------t-tctaa-----c----------------------a-----aa-cg
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   10800 38 +     14967 ca-----at-a---aa-gttt-----ctggaacacagtaag------t-tctaa-----c----------------------a-----aa-cg
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 6665 38 -      7628 ca-----at-a---aa-gttt-----ctggaacacagtaag------t-tctaa-----c----------------------a-----aa-cg
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    121884 42 -    135482 CA-----GT-A---CA-ATTT-----CTGGAACACAGTCAA------A-TTTTATAAATG----------------------T-----TA-G-
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          11307 38 -     23713 ca-----gt-a---aa-gttc-----ctggaacacagtcag------c-cctaa-----a----------------------a-----aa-tg
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           12458 38 +     61070 ca-----gt-a---aa-gttc-----ttggaacacagtcag------c-cctaa-----c----------------------a-----aa-tg
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       2774 38 +     49596 TA-----AT-A---GG-GATT-----TTGGAATATAGTCAG------T-TCTAA-----C----------------------A-----AA-TG
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4955946 27 -   8017169 CA-----AT-C---TA-TA-T-----TTGTAACAT---CAT------C-ACTA----------------------------------------
i Peromyscus_maniculatus.KI615518.1                     C 0 I 1
s Petromus_typicus.PetTyp_scaffold_33007                    17492 13 -     36578 ----------------------------------------G------T-TACAA-----C----------------------A-----CA-TG
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              3426 46 +      8220 CA-----AT-A---CA-ATTT-----TTGGAACACATGTCA-G----T-CCTTA-----TA-AACGA-AG------------A-----AA-G-
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306           100050 38 +    112873 CA-----AT-A---CA-ATCT-----CTGATATATAGTTCT------T-ATAAAT----G----------------------T-----TA-A-
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           9903 46 +     21690 CA-----AT-A---CA-ATTT-----TTGGAACATATGTCA-G----T-CCTTA-----TA-----T-AGG--------AAGA-----AA-G-
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       26599 38 +     44506 CA-----AT-A---AA-GTTT-----CTGGAACACAGAAAG------T-TCTAA-----C----------------------C-----TA-TG
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        26812 38 +     67491 CA-----AT-A---AA-GTTT-----CTGGAACACAGAAAG------T-TCTAA-----C----------------------C-----TA-TG
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      17051 38 -     98129 CA-----AT-A---AA-GTTT-----CTGGAACACAGAAAG------T-TCTAA-----C----------------------C-----TA-TG
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     26652 38 +    147771 CA-----AT-A---AA-GTTT-----CTGGAACACAGAAAG------T-TCTAA-----C----------------------C-----TA-TG
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         3287 38 -     43940 CA-----AT-A---AA-GTTT-----CTGGAACACAGAAAG------T-TCTAA-----C----------------------C-----TA-TG
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          7370 38 -     55515 CA-----AT-A---AA-GTTT-----CTGGAACACAGAAAG------T-TCTAA-----C----------------------C-----TA-TG
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         26724 38 +    152463 CA-----AT-A---AA-GTTT-----CTGGAACACAGAAAG------T-TCTAA-----C----------------------C-----TA-TG
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       4532 38 -    119457 CA-----AT-A---AA-GTTT-----CTGGAACACAGAAAG------T-TCTAA-----C----------------------C-----TA-TG
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         16446 38 +    134592 CA-----AT-A---AA-GTTT-----CTGGAACACAGAAAG------T-TCTAA-----C----------------------C-----TA-TG
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          27034 38 -     75465 CA-----AT-A---AA-GTTT-----CTGGAACACAGAAAG------T-TCTAA-----C----------------------C-----TA-TG
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              191649 38 -    373494 CA-----AT-A---AA-GTTT-----CTGGAATACAGTAAG------T-TCTAA-----C----------------------A-----AA-TG
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19812296 38 +  19899266 ca-----at-a---aa-gttt-----ctggaatacagtaag------t-tctaa-----c----------------------a-----aa-tg
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                4457 37 -      9567 CA-----AT-A---CA-GTTT-----CTGGAACTTATTCAG------T-TCTTG-----T----------------------A-----AA-T-
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6853275 38 +  12164890 CA-----GT-A---AA-GTTC-----CTGGAACATAGTCAA------T-GTTAA-----C----------------------A-----AA-TG
i Prolemur_simus.MPIZ01000048.1                         I 2 C 0
s Propithecus_coquerelli.NW_012147863.1                     22082 38 -     30946 NN-----NN-N---NN-NNNN-----NNNNNNNNNNNNNNN------N-NNNNN-----N----------------------N-----NN-NN
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         8360 38 +     11805 CA-----AT-A---AA-ATTC-----CTGCAACATAGTCAG------T-GTTAA-----C----------------------A-----AA-TG
i Propithecus_coronatus.k141_1353159                    I 3 C 0
s Propithecus_diadema.k141_577245                           47694 38 +     52369 CA-----GT-A---AA-ATTC-----CTGCAACATAGTCAG------T-GTTAA-----C----------------------A-----AA-TG
i Propithecus_diadema.k141_577245                       I 3 C 0
s Propithecus_edwardsi.k141_1317105                         40081 38 -     44753 ca-----gt-a---aa-attc-----ctgcaacatagtcag------t-gttaa-----c----------------------a-----aa-tg
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            22004 38 +     27322 CA-----GT-A---AA-ATTC-----CTGCAACATAGTCAG------T-GTTAA-----C----------------------A-----AA-TG
i Propithecus_perrieri.k141_7554                        I 3 C 0
s Propithecus_tattersalli.k141_907138                       21653 38 -     53241 CA-----AT-A---AA-ATTC-----CTGCAACATAGTCAG------T-GTTAA-----C----------------------A-----AA-TG
i Propithecus_tattersalli.k141_907138                   I 3 C 0
s Propithecus_verreauxi.k141_158021                         43916 38 -     48185 CA-----AT-A---AA-ATTC-----CTGCAACATAGTCAG------T-GTTAA-----C----------------------A-----AA-TG
i Propithecus_verreauxi.k141_158021                     I 3 C 0
s Psammomys_obesus.NESX01026517.1                           38729 56 +     77221 TG-----AG-T---TA-TA-T-----TTGTAATATAGTTAC------A-GCTAA-----CA-AA-GT-AGGTTctcacacaca-----ta-tt
i Psammomys_obesus.NESX01026517.1                       C 0 I 758
s Pteronotus_parnellii.KE867983.1                            6599 20 -     27784 ---------------------------------atAGTTCt------t-ataaa----tg----------------------t-----ta-a-
i Pteronotus_parnellii.KE867983.1                       I 1 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        250793 42 -    344369 CA-----AT-A---TA-ATTT-----CTGGGACATAGTCAA------T-TTTTATAAATG----------------------T-----TG-A-
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Puma_concolor.QAVW01000427.1                          131540514 42 - 161321710 CA-----GT-A---CA-ATTT-----CTGGAACATAGTCAA------A-TTGTATAAATG----------------------T-----TA-G-
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                21013 38 +     68503 CA-----AT-A---CA-ATTT-----CTGGAATAT-----ATGTCAGT-CCTTA-----G----------------------A-----AG-C-
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13918162 37 +  90463843 TA-----AG-C---TA-TA-T-----TGTTAACATAGGCTC------A-GCTAA-----T----------------------T-----TA-CA
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1793092 34 +   2252614 CA-----AT-A---CA-ATTT-----CTAGAACACAGCCCT------T-A----T----G----------------------T-----TA-A-
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                      1422 38 -      4338 CA-----AT-A---CA-ATTT-----GTGGAATAT-----ATGTCAGT-CCTTA-----G----------------------A-----TG-C-
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15677056 38 -  43202129 CA-----AT-A---AA-GTTT-----CTGGAACACAGAAAG------T-TCTAA-----C----------------------C-----TA-TG
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        8969 38 +     34089 CA-----AT-A---AA-GTTT-----CTGGAACACAGAAAG------T-TCTAA-----C----------------------C-----TA-TG
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              8909 38 -     60842 CA-----AT-A---AA-GTTT-----CTAGAACACAGAAAG------T-TCTAA-----C----------------------C-----TA-TG
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              9003 38 +     67014 CA-----AT-A---AA-GTTT-----CTGGAACACAGAAAG------T-TCTAA-----C----------------------C-----TA-TG
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              8980 38 +     60816 CA-----AT-A---AA-GTTT-----CTGGAACACAGAAAG------T-TCTAA-----C----------------------C-----TA-TG
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 8917 38 -     76454 CA-----AT-A---AA-GTTT-----CTGGAACACAGAAAG------T-TCTAA-----C----------------------C-----TA-TG
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17345702 38 -  30362882 ca-----at-a---aa-gttt-----ctggaacacagaaag------t-tctaa-----c----------------------c-----ta-tg
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         25023 38 -     62485 ca-----at-a---aa-gttt-----ctggaacacagaaag------t-tctaa-----c----------------------c-----ta-tg
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   40065 36 -    114521 CA-----AC-C---CA-GTAT-----CTGGAGCAGGAGCCA------TCTC--T-----G----------------------T-----TA-G-
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  105938 37 -    120886 CA-----AT-C---TA-TA-T-----TTGTAAGGAAGTCTC------A-GCTAA-----C----------------------A-----TA-CA
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            24045 37 +    739146 TA-----AT-C---CA-TTTT-----CTATAGTATAGTCCA------T-CCTTA-----T----------------------T-----TT-G-
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17774269 37 -  27805282 CA-----AT-T---GA-CTTT-----TTATAAAACAGCTCA------T-TCTTA-----G----------------------C-----AT-C-
i Sorex_araneus.JH798170.1                              I 1 C 0
s Spermophilus_dauricus.KZ294190.1                        2244553 38 +   2842873 CA-----AT-A---GA-GATT-----TTGGAATACAGTCAG------T-TCCAA-----C----------------------A-----AA-TG
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             239583 42 -    276980 CA-----AT-A---TA-ATTT-----CTGGGACATAGTCAA------A-TTTTATAAATG----------------------T-----TG-G-
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            33697 42 +     62062 CA-----GA-A---CA-ATAT-----CTTGAACATAGTAAA------A-TTTTATAAATG----------------------T-----TA-G-
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189275456 37 + 218635234 ---------------a-atat-----ttagaatgtatgtct-----gt-ctttataaAGG----------------------T-----TA-G-
i Sus_scrofa.CM000824.4                                 I 1 C 0
s Symphalangus_syndactylus.tarseq_24                        19319 38 -  13920577 CA-----AT-A---AA-GTTT-----CTGGAACACAGTAAG------T-TCTAA-----C----------------------A-----AA-TG
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                2832 38 +     20549 CA-----AT-A---CA-ATCT-----CTGGAACATAGTTCT------T-ATAAA----CA----------------------T-----TA-A-
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               17824 37 +     45698 CA-----TT-A---CA-GTTT-----CTGGAGCATATTCAG------T-CCTTA-----T----------------------A-----AT-G-
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      811302 38 +   1148477 CA-----GT-A---TA-ATTT-----CTGGAACATAGTCCT------T-A--TA-AA-TG----------------------G-----TA-G-
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  61944 38 +     99546 CA-----GT-A---TA-ATTT-----CTGGAACATAGTCCT------T-A--TA-AA-TG----------------------G-----TA-G-
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194012438 38 - 194193292 CA-----AT-A---AA-GTTT-----CTGGAACACAGTAAG------T-TCTAA-----C----------------------A-----AA-CG
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                  1003 30 -      3104 TA-----TT-A---CA-ATTT-----CTGGAACCTATTCTG------T-CAT-----------------------------------------
i Tolypeutes_matacus.TolMat_scaffold_475685             I 101 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  138592 38 -    259118 CA-----GT-A---GA-GTCT-----CTGGAACATAGTGCT------T-ATAAAT----G----------------------T-----TA-A-
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trichechus_manatus.JH594618.1                          16090347 37 +  31416278 ca-----at-a---ta-gttt-----ctggaacatattcaa------t-cctta-----t----------------------a-----aa-t-
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2801626 24 -   3938065 ta-----aC-A---GA-GCTT-----TTGGTGCATATTC------------------------------------------------------
i Tupaia_chinensis.KB320831.1                           C 0 I 10
s Tupaia_tana.TupTan_flattened_line_68454                   10449 24 +     13056 TA-----AC-A---GA-GCTT-----TTGGTGCATGTTC------------------------------------------------------
i Tupaia_tana.TupTan_flattened_line_68454               C 0 I 10
s Tursiops_truncatus.MRVK01000923.1                      69317689 46 -  96451834 CA-----AT-A---CA-ATTT-----TTGGAACATATGTCA-G----T-cctta-----t-----------aaagga-a--ga-----aa-a-
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                     534 38 +    136657 CA-----GT-C---CC-TTAT-----CTGGCACAAGATTCA------GCTCTTT-----G----------------------T-----TA-G-
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 C 0
s Ursus_maritimus.KK498671.1                              6521216 42 +  28682327 CA-----AC-A---TA-ATTT-----CTGGGACATagtcaa------t-ttttataaatg----------------------t-----tg-g-
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  9918 38 -     20643 ca-----at-a---aa-gttc-----ctggaacatagtcaa------t-gttaa-----c----------------------a-----aa-tg
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             29453 38 -     33872 ca-----at-a---aa-gttc-----ctggaacatagtcaa------t-gttaa-----c----------------------a-----aa-tg
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1528729 43 -   2331223 ca-----aT-A---CA-ATTT-----TTGGAACATATGTCA-G----T-CTTTA-----TA-AA--T--G------------T-----TA-G-
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                144893 42 -    281493 CA-----GT-A---TA-ATTT-----CTGGGACATAGTCAA------A-TTTTATAAATG----------------------T-----TA-G-
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       132050 38 -    134049 CA-----AT-A---TA-AATT-----TGGGAATATAGTAAG------T-TCCAA-----C----------------------A-----AA-TG
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        220365 42 -    227762 TA-----AT-A---TA-ATTT-----CTGGGACATAGTCAA------T-TTTTATAAGTG----------------------T-----TA-G-
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_202118                     1543 38 -      3360 CA-----AT-A---GA-TATT-----TTGGAATATACTCAG------A-CCTAA-----T----------------------A-----AA-TA
i Zapus_hudsonius.ZapHud_scaffold_202118                C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            2428 46 -     13665 CA-----AT-A---CA-ATTT-----TTGGAACATATGTCA-G----T-CCTTA-----TA-AA-GG-AAG-----------A-----AA-G-
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Tragulus_javanicus.TraJav_scaffold_14717                   9488 743 +     90398 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Trachypithecus_pileatus.k141_532233                       30126  0 -     40754 I
e Trachypithecus_phayrei.ctg364                            232455  0 -   1198723 I
e Trachypithecus_obscurus.k141_411399                         131  0 +     12010 I
e Trachypithecus_melamera.k141_950981                        2232  0 -      3512 I
e Trachypithecus_leucocephalus.k141_352489                   1214  0 +      9423 I
e Trachypithecus_laotum.k141_897381                         45646  0 -     53586 I
e Trachypithecus_hatinhensis.k141_641377                     1240  0 +      1365 I
e Trachypithecus_germaini.k141_240878                        5067  3 -     24955 I
e Trachypithecus_geei.k141_137495                           30106  0 -     42322 I
e Trachypithecus_francoisi.k141_1012484                       874  0 +      8809 I
e Trachypithecus_cristatus.k141_968903                      32589  3 +     43409 I
e Trachypithecus_crepusculus.k141_863597                     4944  0 -     23436 I
e Trachypithecus_auratus.k141_672638                         4947  3 +     38635 I
e Tarsius_wallacei.k141_48636                               64696  0 +     65473 C
e Tarsius_lariang.k141_609102                               31387  0 +     42269 C
e Semnopithecus_vetulus.k141_748269                          4706  0 +     17284 I
e Semnopithecus_schistaceus.k141_628310                     45652  0 -     53123 I
e Semnopithecus_priam.k141_368201                           10107  0 -     20692 I
e Semnopithecus_johnii.k141_1300894                          1368  0 +     13764 I
e Semnopithecus_hypoleucos.k141_2141024                      1351  0 -      8815 I
e Semnopithecus_entellus.k141_1743075                       45578  0 +     45790 I
e Rhinopithecus_strykeri.ctg241                            462135  0 +   1472273 I
e Rhinopithecus_bieti.k119_554384                            2917  0 -     17045 C
e Pygathrix_nigripes_a.k141_758202                             3050  0 -      8240 I
e Pygathrix_nigripes_b.ctg25                                14340869  0 -  15297009 I
e Pygathrix_cinerea.k141_951151                              3033  0 -      8225 I
e Presbytis_mitrata.k141_1767317                            10996  0 +     15869 I
e Presbytis_comata.k141_678168                              11007  0 +     11126 I
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000342.1                3428480  0 -   4356645 I
e Piliocolobus_kirkii.k141_451083                            4879  0 -     13367 I
e Piliocolobus_gordonorum.k141_736355                       29715  0 +     67079 I
e Piliocolobus_badius.k141_512007                           29798  0 +     37672 I
e Nasalis_larvatus.k141_1382660                              4275  0 +      5784 I
e Colobus_polykomos.k141_1178012                               88  3 -     11758 I
e Colobus_guereza.LG08                                   96946830  0 - 156195979 I
e Colobus_angolensis.KN983490.1                            283936  0 +    886210 I
e Cephalopachus_bancanus.k141_702587                        12545  0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530  0 +    345090 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               18079 11 +    209709 CTAGTTC-----T---T---TT
s Acinonyx_jubatus.LLWD01000356.1                         2040030  7 +   3721120 ----CTT-----T---C---TT
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    118385  3 -    189883 ------------T---C----T
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 10 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10663990  7 +  23371972 ----ctt-----t---c---tt
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7100516  7 -  16596857 ----ctt-----t---c---tt
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_141108                   1764 10 -      7259 TTAGCAC-----T---C----T
i Allactaga_bullata.AllBul_scaffold_141108              C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   5953 11 -     60446 CTAGTTC-----T---T---TT
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         6669 11 -     29318 ctagttc-----t---t---tt
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         5607 11 +     38766 ctagttc-----t---t---tt
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          6563 11 -     80423 ctagttc-----t---t---tt
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              1547 11 +     19852 ctagttc-----t---t---tt
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                3791 11 -     12443 ctagttc-----t---t---tt
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                             1090 11 +      5070 ctagttc-----t---t---tt
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                  835 11 -      1641 ctagttc-----t---t---tt
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          3574 11 -     24210 ctagttc-----t---t---tt
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           30156 11 -     30219 ctagttc-----t---t---tt
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_405616                              5992 11 +     16794 ctagttc-----t---t---tt
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                            1124 11 -      1470 ctagttc-----t---t---tt
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             5269 11 -      9835 ctagttc-----t---t---tt
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3526058  6 +   4113121 ----CTT-----A---G---C-
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      393077  4 -    631301 ----TGT-----T---------
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 I 1052
s Antilocapra_americana.AntAmePen_scaffold_27338             3490  6 +     55446 ----CTT-----A---G---A-
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 66879 11 +     78111 ctacttc-----t---t---tt
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            9827 11 +     22701 CTACTTC-----T---T---TT
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5753783 11 +   9889416 ctacttc-----t---t---tt
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                            10382 11 -    104377 ctacttc-----t---t---tt
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                              10389 11 +     23246 CTACTTC-----T---T---TT
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     3049 10 +     11424 CTAGTTT-----T---T----T
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        6972  7 +      9265 ttagcta---------------
i Arctocebus_calabarensis.k141_587554                   C 0 I 3
s Artibeus_jamaicensis.ArtJam_scaffold_41619                11485  4 -     29036 ----TGT-----T---------
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 I 929
s Ateles_geoffroyi_b.tarseq_2582                             9543676 11 +  39197703 ctagttc-----t---t---tt
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             64950 11 +     85812 ctagttc-----t---t---tt
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                15963 11 +     89302 ctagttc-----t---t---tt
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             20464 11 -     58268 ctagttc-----t---t---tt
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             68458 11 +    119057 ctagttc-----t---t---tt
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              10427 11 -     25888 ctagttc-----t---t---tt
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                11490 11 -     16375 ttagcta-----t---C---TT
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               5106 11 +      6337 ttagcta-----t---C---TT
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26384544  6 +  51448160 ----CTA-----A---C---A-
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                        9717  6 -     13118 ----CTA-----A---C---A-
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   48522  6 -     72089 ----CTT-----A---G---C-
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   302661  6 -   6870073 ----CTT-----A---g---c-
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22956759  6 + 161108492 ----CTT-----A---g---c-
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     419000  6 +    998990 ----CTT-----a---g---c-
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22665413  6 + 158972876 ----CTT-----A---g---c-
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               675350  6 +   1914593 ----CTT-----A---g---c-
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               118325 11 -    171031 CTAGTTC-----T---T---TT
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 17345 11 +    125063 CTAGTTC-----T---T---TT
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                19392 11 -    216513 CTAGTTC-----T---T---TT
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       11935 11 -    134917 CTAGTTC-----T---T---TT
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3223664  7 -   8989139 ----ATC-----T---C---TT
i Camelus_bactrianus.KN276303.1                         C 0 I 1
s Camelus_dromedarius.KN271192.1                           401365  7 -  15254737 ----atc-----t---t---tt
i Camelus_dromedarius.KN271192.1                        C 0 I 1
s Camelus_ferus.KB016973.1                                2977102  7 +   6889770 ----ATC-----T---C---TT
i Camelus_ferus.KB016973.1                              C 0 I 1
s CanFam4.chr31                                          11526855  7 +  39901454 ----CTT-----T---C---TT
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   21829  7 +     87036 ----CTT-----T---C---TT
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11273538  7 -  35597290 ----ctt-----t---c---tt
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11096249  7 +  39895921 ----ctt-----t---c---tt
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16463034  7 -  44759192 ----ctt-----t---c---tt
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21334002  6 + 157394656 ----CTT-----A---g---c-
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135712357  6 - 157403528 ----CTT-----A---G---C-
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_780116                    61 10 +      1571 TTAGTGT-----T---C----T
i Capromys_pilorides.CapPil_scaffold_780116             C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               62499  4 +     67245 ----TGT-----T---------
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 I 910
s Castor_canadensis.CasCan_scaffold_1326                      507 10 -    202837 TTAGCTT-----T---C----T
i Castor_canadensis.CasCan_scaffold_1326                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   163168  7 -    276539 ----CTT-----T---C---TT
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15790200 10 -  24422027 TTAGCTT-----T---C----T
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15802139 10 -  24440124 TTAGCTT-----T---C----T
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       180311 10 +    436027 TTAGCTT-----T---C----T
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18896052 11 -  29618158 ctagttc-----t---t---tt
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                12702 11 -     26817 ctagttc-----t---t---tt
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                16946 11 +     25043 ctagttc-----t---t---tt
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4368359  7 +   7569818 ----ctt-----t---c---tt
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         8116  7 -      9338 ----CTT-----T---C---TT
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6559893 11 +   6739814 ctagttc-----t---t---tt
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      31370 11 +     60454 ctagttc-----t---t---tt
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          6574 11 -     21101 ctagttc-----t---t---tt
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         63884 11 -    107033 ctagttc-----t---t---tt
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        6747 11 -     17608 ctagttc-----t---t---tt
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          3912 11 +     45019 ctagttc-----t---t---tt
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           4188 11 +     15177 ctagttc-----t---t---tt
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          6794 11 +     16677 ctagttc-----t---t---tt
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           28984 11 +     35983 ctagttc-----t---t---tt
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11995515 11 +  12117833 ctagttc-----t---t---tt
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46482491 11 +  46592721 ctagttc-----t---t---tt
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                        608 11 -     27215 ctagttc-----t---t---tt
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       6808 11 +     35577 ctagttc-----t---t---tt
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        6602 11 -     25661 ctagttc-----t---t---tt
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        6774 11 -     17744 ctagttc-----t---t---tt
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        26143 11 +     37128 ctagttc-----t---t---tt
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           63699 11 -     68416 ttagcta-----t---C---TT
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                           12819 11 +     13308 ttagcta-----t---C---TT
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             9988 11 -     18223 CTAGTTC-----T---T---TT
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              1726 11 +    188999 CTAGTTC-----T---T---TT
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           46025 11 +     57117 CTAGTTC-----T---T---TT
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          50705 11 +     54541 CTAGTTC-----T---T---TT
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15964897 10 +  43084221 ttagttt-----t---c----t
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         75506 11 +    196370 ctagttc-----t---t---tt
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          19687 11 +     40510 ctagttc-----t---t---tt
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15144328 11 -  15256731 ctagttc-----t---t---tt
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      38792 11 -     53260 ctagttc-----t---t---tt
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101149351 11 + 101219884 ctagttc-----t---t---tt
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                19221  4 -     21363 ----GTT-----C---------
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           764525  4 +    964067 ----GTT-----C---------
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_954668              1432 12 -      1738 ----ATTAACTCC---T---GG
i Chrysochloris_asiatica.ChrAsi_scaffold_954668         C 0 I 1
s Condylura_cristata.JH655880.1                          60622645  7 +  78930452 ----CTT-----T---C---TT
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         3023  4 -      5782 ----TTT-----T---------
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 I 905
s Cricetomys_gambianus.CriGam_scaffold_949                 283163  4 -    399297 A-TGC-----------------
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 I 1
s Cricetulus_griseus.LT883672.1                          53035512  9 +  72327488 A-GGCTC-----T---C----T
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              2611 11 -     22648 ----CATGGC-AT---T---TT
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            58009  7 -     70449 ----CTT-----T---C---TT
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  214784  6 -    956709 TTAGCT----------------
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 I 2
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 36447 10 -     67205 TTAATTT-----T---C----T
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                21386 10 +     26546 TTAGCTT-----T---C----T
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             62527  8 -    236241 TTAGCTT-----T---------
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16849651 11 +  31942871 ttagcta-----t---c---tt
i Daubentonia_madagascariensis.ctg11                    C 0 I 1
s Delphinapterus_leucas.KZ290064.1                       80041147  6 -  96802777 ----CTA-----A---C---A-
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18701712  4 -  18957592 ----TAT-----T---------
i Desmodus_rotundus.KZ672188.1                          C 0 I 1050
s Dicerorhinus_sumatrensis.PEKH010003161.1                 326761  7 +    993696 ----ctt-----t---c---tt
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   7393  7 +    151128 ----CTT-----T---C---TT
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   160145 10 +    228994 TTAGCTT-----T---C----T
i Dinomys_branickii.DinBra_scaffold_1996                C 0 I 223
s Dipodomys_ordii.KN672545.1                              3660816 10 +   4240102 TTAGCTT-----T---C----T
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  3190 10 -     11986 TTAGCTT-----T---C----T
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                41101 10 -     73477 TTAGCTT-----T---C----A
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           23000426 12 -  44670279 ----gttaactcC---C---TG
i Echinops_telfairi.JH980316.1                          C 0 I 1
s Elaphurus_davidianus.JRFZ01086400.1                     1496739  6 +   1727528 ----CTT-----A---G---C-
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7834680 12 +  15467074 ----TTTGGGTGT---G---TG
i Elephantulus_edwardii.JH947210.1                      C 0 I 1
s Ellobius_lutescens.LOEQ01003611.1                        244325  9 -    369425 A-AGACC-----T---C----T
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01076532.1                            656  9 +      9159 A-AGATC-----T---C----T
i Ellobius_talpinus.LOJH01076532.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85877979  7 +  99434291 ----ctt-----t---c---tt
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4709472 10 +   6522550 ----CTT-----TCTTC---TT
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5856853  7 -   7175178 ----ttt-----t---c---tt
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13355339  7 +  41866177 ----ttt-----t---c---tt
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          16829  7 +     92910 ----ttt-----t---c---tt
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11541781  7 +  16010500 ----CTT-----A---T---GT
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48781361 11 -  48907691 ctagttc-----t---t---tt
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          319387  6 +    330699 ----CTA-----A---C---A-
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             65844  6 +     89355 ----CTA-----A---C---A-
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              9795 11 +     13586 TTAGCTA-----T---C---TT
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_1015201                              3054 11 -      4292 TTAGCTA-----T---C---TT
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            16191 11 +     36558 TTAGCTA-----T---C---TT
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            12513 11 +     60246 ttagcta-----t---C---TT
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                15998 11 +    109717 ttagcta-----t---C---TT
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 3981 11 -     19505 TTAGCTA-----T---C---TT
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                20656 11 +     27497 TTAGCTA-----T---C---TT
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           23112 11 +     26808 TTAGCTA-----T---C---TT
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                37844 11 +     46535 TTAGCTA-----T---C---TT
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              20585 11 -     29447 TTAGCTA-----T---C---TT
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129899450  7 - 159252932 ----CTT-----T---C---TT
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129286425  7 - 158578461 ----CTT-----T---C---TT
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 27524  7 +     52776 ----CTT-----T---C---TT
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13896667 10 -  19261668 TTAgtgt-----t---c----t
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               160101  3 +    324696 ----------------c---tt
i Galeopterus_variegatus.GalVar_scaffold_354            I 3 C 0
s Galago_moholi.ctg555                                     215819  7 -    847004 ttagctA---------------
i Galago_moholi.ctg555                                  C 0 I 3
s Galago_senegalensis.k141_964197                           18180  7 -     43889 ttagctA---------------
i Galago_senegalensis.k141_964197                       C 0 I 3
s Galagoides_demidoff.k141_1769638                          15324  7 +     27357 ttaactA---------------
i Galagoides_demidoff.k141_1769638                      C 0 I 3
s Giraffa_tippelskirchi.LVKQ01S012154.1                    186514  6 -    189561 ----ctt-----t---g---c-
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           16996 10 -     18683 TTAGCTC-----T---C----T
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               9777 11 -     14630 CTAGTTC-----T---T---TT
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119656877 11 - 195582420 ctagttc-----t---t---tt
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   80311  6 +    118900 TTAGCT----------------
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 I 1
s Hapalemur_alaotrensis.k141_1280836                         6587 11 +     10286 ttagcta-----t---C---TT
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             5065 11 -     11661 ttagcta-----t---C---TT
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                            10392 11 +     56096 ttagcta-----t---C---TT
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        33641 11 -     42470 ttagcta-----t---C---TT
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        50264 11 -     54384 ttagcta-----t---C---TT
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              23147  7 +     53719 ----CTT-----T---C---TT
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                33407  6 -     91191 ----CTT-----A---G---C-
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2561163 10 +  31725842 TTAGctt-----t---c----t
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               63388 12 +     73687 ----gttagcccC---C---TG
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 I 1
s Hippopotamus_amphibius.HipAmp_scaffold_1308              151176  6 +    277961 ----CTA-----A---C---A-
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      283555  4 -    477199 ----CTT-----T---------
i Hipposideros_armiger.JXIK01001085.1                   I 44 I 1549
s Hipposideros_galeritus.HipGal_scaffold_7653                6119  4 +     86108 ----CTT-----T---------
i Hipposideros_galeritus.HipGal_scaffold_7653           I 38 n 1471
s Hoolock_leuconedys.ctg79                                      9692 11 -   7690867 ctagttc-----t---t---tt
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 23620  7 -     67322 ----CTT-----T---C---TT
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           21762 10 -    119109 TCAGCTT-----T---C----T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_1816750                             2263 11 +      3202 CTAGTTC-----T---T---TT
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1136966                               272 11 +      9785 CTAGTTC-----T---T---TT
i Hylobates_agilis.k141_1136966                         C 0 C 0
s Hylobates_klossii.k141_468230                              3752 11 +      5464 CTAGTTC-----T---T---TT
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14629098 11 -  25970782 CTAGTTC-----T---T---TT
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            1650 11 +      4161 CTAGTTC-----T---T---TT
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             37206 11 -     60944 CTAGTTC-----T---T---TT
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                    10066 10 +     22540 TTAACTC-----C---C----T
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7130890 10 +  13083262 CTagcac-----t---c----t
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 I 1
s Indri_indri.k141_2197838                                   2107 11 +      3484 ttagcta-----t---C---TT
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              13375  6 +     17520 ----CTA-----A---C---A-
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8579503 10 +  11848649 TAGgcac-----t---c----t
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               27994  6 +     37189 ----CTA-----A---C---A-
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          54547 11 -    147782 CTAGTTC-----T---T---TT
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    6054  4 +     26176 ----CTT-----T---------
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 I 2
s Lemur_catta.scaffold_1                                258411939 11 - 285822530 ttagcta-----t---C---TT
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        29245 11 +     39228 TTAGCTA-----T---C---TT
i Lepilemur_ankaranensis.k141_884009                    I 10 C 0
s Lepilemur_dorsalis.k141_134267                            58609 11 +     63517 TTAGCTA-----T---C---TT
i Lepilemur_dorsalis.k141_134267                        I 10 C 0
s Lepilemur_ruficaudatus.k141_574529                        36989 11 -     38897 TTAGCTA-----T---C---TT
i Lepilemur_ruficaudatus.k141_574529                    I 10 C 0
s Lepilemur_septentrionalis.k141_710646                      3035 11 -     13103 TTAGCTA-----T---C---TT
i Lepilemur_septentrionalis.k141_710646                 I 10 C 0
s Leptonychotes_weddellii.KB714749.1                      3091952  7 -   3498232 ----ctt-----t---c---tt
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    21381 10 +     22452 TTAATGT-----T---A----T
i Lepus_americanus.LepAme_scaffold_62849                C 0 I 186
s Lipotes_vexillifer.KE558548.1                            140309  6 +   3060487 ----CTA-----A---C---A-
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19252982 11 +  19376315 ctagttc-----t---t---tt
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           15782  7 +     84689 ctagctA---------------
i Loris_lydekkerianus.k141_550999                       C 0 I 3
s Loris_tardigradus.ctg97                                 3783520  7 +   6799190 ctagctA---------------
i Loris_tardigradus.ctg97                               C 0 I 3
s Loxodonta_africana.GL010040.1                          20599313 12 -  62548349 ----gttagctcC---C---TG
i Loxodonta_africana.GL010040.1                         C 0 I 1
s Lycaon_pictus.CM007556.1                               11095705  7 +  39895028 ----ctt-----t---c---tt
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             24733 11 +     74745 CTAGTTC-----T---T---TT
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12711194 11 +  12821369 CTAGTTC-----T---T---TT
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                3767 11 -     26467 CTAGTTC-----T---T---TT
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           51638 11 +     63263 CTAGTTC-----T---T---TT
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 3748 11 -     26361 CTAGTTC-----T---T---TT
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 6938 11 -      7381 CTAGTTC-----T---T---TT
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  50167 11 -     79256 CTAGTTC-----T---T---TT
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196040265 11 + 196197964 ctagttc-----t---t---tt
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11450435 11 +  11645122 ctagttc-----t---t---tt
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   9121 11 -     46448 CTAGTTC-----T---T---TT
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                6784 11 -     13212 CTAGTTC-----T---T---TT
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 20464 11 -     55006 CTAGTTA-----T---T---TT
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43845579 11 +  43892939 CTAGTTC-----T---T---TT
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               21748 11 -     24607 CTAGTTC-----T---T---TT
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               9118 11 -     27140 CTAGTTC-----T---T---TT
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43442154 11 -  43563597 ctagttc-----t---t---tt
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4454958 11 -   4543643 ctagttc-----t---t---tt
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            152663  7 +    252755 ----ttt-----t---c---tt
i Manis_javanica.JSZB01003966.1                         I 8 C 0
s Manis_pentadactyla.KN017078.1                             40257  7 +     58827 ----ttt-----t---c---tt
i Manis_pentadactyla.KN017078.1                         I 8 C 0
s Marmota_marmota.CZRN01000005.1                         36878757 10 +  64221397 ctagcac-----t---c----t
i Marmota_marmota.CZRN01000005.1                        C 0 I 1
s Megaderma_lyra.MegLyr_scaffold_3562                       66101  4 -    234502 ----CAT-----T---------
i Megaderma_lyra.MegLyr_scaffold_3562                   I 10 I 943
s Mellivora_capensis.MelCap_flattened_line_15433             7082  7 -     87323 ----CTT-----T---C---TT
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 2566  9 +    115071 a-ggttc-----t---c----T
i Meriones_unguiculatus.MerUng_scaffold_9483            I 770 C 0
s Mesocricetus_auratus.KB708139.1                         1052036  9 -  26018355 A-GGCTC-----T---C----T
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    2966  6 -     12939 ----CTA-----A---C---A-
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16514970 11 +  47401472 TTAGCTA-----T---C---tt
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  41994 12 -     48017 ----gttaactcC---C---TG
i Microgale_talazaci.MicTal_scaffold_34660              C 0 I 1
s Micronycteris_hirsuta.MicHir_scaffold_37978               25460  4 -     32043 ----TAT-----T---------
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 I 902
s Microtus_ochrogaster.CM001673.1                        22825123  9 -  98408828 A-AGATC-----T---C----T
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8213514 10 +  10048721 ----CTT-----T---CTTCTT
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            38005 10 +     45743 ----CTT-----T---CTTCTT
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         6700 11 +     29742 ctagttG-----T---T---TT
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        17448  7 -    104932 ----CTT-----T---C---TT
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     5653 11 -     12809 ttagcta-----t---C---TT
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 150740  6 +    154973 ----CTA-----A---C---A-
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                163983  4 +    265003 ----TAT-----T---------
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 I 895
s Moschus_moschiferus.MosMos_scaffold_78805                  6756  6 -     19904 ----CTT-----A---G---C-
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  150824  7 -    168139 ----CTT-----T---C---TT
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          24929  7 -    100666 ----CTT-----T---C---TT
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70772382  9 +  92629107 A-GGTTc-----t---c----t
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75494437  9 +  98207768 A-GGTTc-----t---c----t
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67561188 11 +  89017189 a-gattc-----t-ctc----t
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74337160  9 +  97876770 A-GGTTc-----t---c----t
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             15399 10 +     98495 ttaactt-----t---c----t
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4429188  7 -  28371801 ----ctt-----t---c---tt
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     96164 10 -    117718 TTAGTGT-----T---C----T
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               971807  7 +   8389877 ----CTT-----T---C---TT
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5023221  7 +   6462685 ----CTT-----T---C---TT
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3469313  7 -   3747815 ----CTT-----T---C---TT
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        14546  7 +     66751 ----CTT-----T---C---TT
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             8188  4 -      8794 ----GTT-----C---------
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4490846  7 -  14209539 ----ctt-----t---c---tt
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3955331  6 -   4490290 ----CTA-----A---C---A-
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  51061  4 +     94413 ----CAT-----T---------
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 I 1131
s Nomascus_annamensis.k141_762468                             769 11 -      2755 ccaattc-----t---t---tt
i Nomascus_annamensis.k141_762468                       C 0 C 0
s Nomascus_concolor.k141_256540                              7381 11 -      8966 ctagttc-----t---t---tt
i Nomascus_concolor.k141_256540                         C 0 C 0
s Nomascus_gabriellae.k141_1400361                           1320 11 -      2203 ccagttc-----t---t---tt
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_453                             6632 11 +     12787 ccagttc-----t---t---tt
i Nomascus_siki_b.tarseq_453                        C 0 C 0
s Nomascus_siki_a.k141_421408                                  1234 11 +     16235 ctagttc-----t---t---tt
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                38570  7 +   3668941 ----ctt-----t---c---tt
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65572445  7 -  95554990 ttagcta---------------
i Nycticebus_bengalensis.LG16                           C 0 I 3
s Nycticebus_coucang.k141_771591                            15855  7 +     16181 TTAGCTA---------------
i Nycticebus_coucang.k141_771591                        C 0 I 5
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65680633  7 +  89412551 ttagctA---------------
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 I 3
s Ochotona_princeps.JH802095.1                            5000428 10 -  23139505 TTAGTAC-----C---A----T
i Ochotona_princeps.JH802095.1                          C 0 I 193
s Octodon_degus.JH651621.1                                3691504 10 +  10294119 TTAGTGT-----T---C----T
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             685550  7 -   3126709 ----ctt-----t---c---tt
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1084186  6 +   1425656 ----CTT-----A---g---c-
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         42255  6 +     78940 ----ctt-----t---g---c-
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  130922  9 +    145789 A-AGCTC-----T---C----T
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  43805  9 +     62360 A-GGCTC-----T---C----T
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7229005  6 -   7562323 ----cta-----a---c---a-
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              64718  3 -     66828 ----gtt---------------
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 I 3
s Oryctolagus_cuniculus.CM000803.1                      141884398 10 + 163896628 TTAATGT-----T---A----C
i Oryctolagus_cuniculus.CM000803.1                      C 0 I 185
s Otocyon_megalotis.JAEUCK010005121.1                      315708  7 -    505867 ----ctt-----t---c---tt
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        5681  7 -     53940 ttagctA---------------
i Otolemur_crassicaudatus.k141_505435                   C 0 I 3
s Otolemur_garnettii.GL873528.1                          18013650  7 -  38779656 TTAGCTA---------------
i Otolemur_garnettii.GL873528.1                         C 0 I 3
s Ovis_aries.CM001582.2                                 134083193  6 - 275406953 ----CTT-----A---g---c-
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      84427  6 +    140051 ----CTT-----A---G---C-
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127579056 11 - 205426864 ctagttc-----t---t---tt
i Pan_paniscus.CM003386.1                               I 38 C 0
s Pan_troglodytes.CM009241.2                            120156216 11 - 196562556 ctagttc-----t---t---tt
i Pan_troglodytes.CM009241.2                            I 38 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  40444  7 +    295523 ----TTT-----T---C---TT
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3644259  7 +  18214204 ----CTT-----T---C---TT
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5033907  7 -   6340057 ----CTT-----T---C---TT
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1072064  6 -   1292953 ----CTT-----a---g---c-
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188160943 11 - 188283584 ctagttc-----t---t---tt
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              4033 11 +     25005 ctagttc-----t---t---tt
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47518315 11 +  47705337 ctagttc-----t---t---tt
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 72306 11 -    104429 ctagttc-----t---t---tt
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   10838 11 +     14967 ctagttc-----t---t---tt
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 6703 11 -      7628 ctagttc-----t---t---tt
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    121926  7 -    135482 ----CTT-----T---C---TT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          11345  7 -     23713 ttagctA---------------
i Perodicticus_ibeanus.k141_117958                      C 0 I 3
s Perodicticus_potto.k141_1136815                           12496  7 +     61070 ttagctA---------------
i Perodicticus_potto.k141_1136815                       C 0 I 3
s Perognathus_longimembris.PerPac_flattened_line_19359       2812 10 +     49596 CTTGATT-----T---T----T
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4955974  9 -   8017169 A-GGCTC-----T---C----T
i Peromyscus_maniculatus.KI615518.1                     I 1 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    17505 10 -     36578 TTGGCTT-----T---C----T
i Petromus_typicus.PetTyp_scaffold_33007                C 0 I 1
s Phocoena_phocoena.PhoPho_flattened_line_53071              3472  6 +      8220 ----CTA-----A---C---A-
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306           100088 10 +    112873 ----CTT-----TCTTC---TT
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990           9949  6 +     21690 ----CTA-----A---C---A-
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       26637 11 +     44506 CTAGTTC-----T---T---TT
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        26850 11 +     67491 CTAGTTC-----T---T---TT
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      17089 11 -     98129 CTAGTTC-----T---T---TT
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     26690 11 +    147771 CTAGTTC-----T---T---TT
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         3325 11 -     43940 CTAGTTC-----T---T---TT
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          7408 11 -     55515 CTAGTTC-----T---T---TT
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         26762 11 +    152463 CTAGTTC-----T---T---TT
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       4570 11 -    119457 CTAGTTC-----T---T---TT
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         16484 11 +    134592 CTAGTTC-----T---T---TT
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          27072 11 -     75465 CTAGTTC-----T---T---TT
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              191687 11 -    373494 ctagttc-----t---t---tt
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19812334 11 +  19899266 ctagttc-----t---t---tt
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                4494 12 -      9567 ----GTTAGCCCC---C---TG
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 I 1
s Prolemur_simus.MPIZ01000048.1                           6853313 11 +  12164890 TTAgcta-----t---c---tt
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     22120 11 -     30946 NNNNNNN-----N---N---NN
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         8398 11 +     11805 TTAGCTA-----T---C---TT
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           47732 11 +     52369 TTAGCTA-----T---C---TT
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         40119 11 -     44753 ttagcta-----t---C---TT
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            22042 11 +     27322 TTAGCTA-----T---C---TT
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       21691 11 -     53241 TTAGCTA-----T---C---TT
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         43954 11 -     48185 TTAGCTA-----T---C---TT
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           39543  9 +     77221 a-gGTTC-----T---C----T
i Psammomys_obesus.NESX01026517.1                       I 758 C 0
s Pteronotus_parnellii.KE867983.1                            6619  4 -     27784 ----cat-----t---------
i Pteronotus_parnellii.KE867983.1                       C 0 I 911
s Pteronura_brasiliensis.PteBra_flattened_line_1343        250835  7 -    344369 ----CTT-----T---C---TT
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Puma_concolor.QAVW01000427.1                          131540556  7 - 161321710 ----CTT-----T---C---TT
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                21051  6 +     68503 ----CTT-----A---G---C-
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13918199  9 +  90463843 A-Ggttt-----t---c----t
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1793126  4 +   2252614 ----CTT-----T---------
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 I 1032
s Saiga_tatarica.SaiTat_scaffold_371890                      1460  6 -      4338 ----CTT-----A---G---A-
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15677094 11 -  43202129 CTagctc-----t---t---tt
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        9007 11 +     34089 CTAGCTC-----T---T---TT
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              8947 11 -     60842 CTAGCTC-----T---T---TT
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              9041 11 +     67014 CTAGCTC-----T---T---TT
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              9018 11 +     60816 CTAGCTC-----T---T---TT
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 8955 11 -     76454 CTAGCTC-----T---T---TT
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17345740 11 -  30362882 ctagttc-----t---t---tt
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         25061 11 -     62485 ctagttc-----t---t---tt
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   40101  7 -    114521 ----CTT-----T---C---TT
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  105975  9 -    120886 T-GGCTC-----T---C----T
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            24082  7 +    739146 ----CTT-----T---C---TT
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17774306 11 -  27805282 ----CAAGACT-G---T---CT
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2244591 10 +   2842873 CTagcac-----t---c----t
i Spermophilus_dauricus.KZ294190.1                      C 0 I 1
s Spilogale_gracilis.SpiGra_flattened_line_905             239625  7 -    276980 ----CTT-----T---C---TT
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            33739  7 +     62062 ----CTT-----T---C---TT
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189275493  7 + 218635234 ----CTG-----T---C---TT
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        19357 11 -  13920577 CTAGTTC-----T---T---TT
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                2870  7 +     20549 ----CTT-----T---C---TT
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               17861  4 +     45698 ----GTT-----C---------
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      811340  7 +   1148477 ----CTT-----T---C---TC
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  61982  7 +     99546 ----CTT-----T---C---TC
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194012476 11 - 194193292 ctagttc-----t---t---tt
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  138630  4 -    259118 ----TGT-----T---------
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 I 910
s Trichechus_manatus.JH594618.1                          16090384 12 +  31416278 ----gttagctcC---C---TG
i Trichechus_manatus.JH594618.1                         C 0 I 1
s Tupaia_chinensis.KB320831.1                             2801660 11 -   3938065 TTAGCAC-----T---C---TT
i Tupaia_chinensis.KB320831.1                           I 10 C 0
s Tupaia_tana.TupTan_flattened_line_68454                   10483 11 +     13056 TTAGCAC-----T---C---TT
i Tupaia_tana.TupTan_flattened_line_68454               I 10 C 0
s Tursiops_truncatus.MRVK01000923.1                      69317735  6 -  96451834 ----cta-----a---c---a-
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                     572  7 +    136657 ----CTT-----T---T---CT
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 C 0
s Ursus_maritimus.KK498671.1                              6521258  7 +  28682327 ----ctt-----t---c---tt
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  9956 11 -     20643 ttagcta-----t---C---TT
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             29491 11 -     33872 ttagcta-----t---C---TT
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1528772  7 -   2331223 ----ATC-----T---C---TT
i Vicugna_pacos.KN269600.1                              C 0 I 1
s Vulpes_lagopus.VulLag_flattened_line_2045                144935  7 -    281493 ----CTT-----T---C---TT
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       132088 10 -    134049 CTAGCAC-----T---T----T
i Xerus_inauris.XerIna_scaffold_7898                    C 0 I 1
s Zalophus_californianus.ZalCal_flattened_line_4097        220407  7 -    227762 ----CTT-----T---C---TT
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_202118                     1581 10 -      3360 TTAGCAC-----T---C----T
i Zapus_hudsonius.ZapHud_scaffold_202118                C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            2474  6 -     13665 ----CTA-----A---C---A-
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           5186  0 -      6963 C
e Tragulus_javanicus.TraJav_scaffold_14717                   9488 743 +     90398 I
e Tolypeutes_matacus.TolMat_scaffold_475685                  1033  0 -      3104 C
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Dasypus_novemcinctus.JH568778.1                          186259  0 -   6883506 C
e Trachypithecus_pileatus.k141_532233                       30126  0 -     40754 I
e Trachypithecus_phayrei.ctg364                            232455  0 -   1198723 I
e Trachypithecus_obscurus.k141_411399                         131  0 +     12010 I
e Trachypithecus_melamera.k141_950981                        2232  0 -      3512 I
e Trachypithecus_leucocephalus.k141_352489                   1214  0 +      9423 I
e Trachypithecus_laotum.k141_897381                         45646  0 -     53586 I
e Trachypithecus_hatinhensis.k141_641377                     1240  0 +      1365 I
e Trachypithecus_germaini.k141_240878                        5067  3 -     24955 I
e Trachypithecus_geei.k141_137495                           30106  0 -     42322 I
e Trachypithecus_francoisi.k141_1012484                       874  0 +      8809 I
e Trachypithecus_cristatus.k141_968903                      32589  3 +     43409 I
e Trachypithecus_crepusculus.k141_863597                     4944  0 -     23436 I
e Trachypithecus_auratus.k141_672638                         4947  3 +     38635 I
e Tarsius_wallacei.k141_48636                               64696  0 +     65473 C
e Tarsius_lariang.k141_609102                               31387  0 +     42269 C
e Semnopithecus_vetulus.k141_748269                          4706  0 +     17284 I
e Semnopithecus_schistaceus.k141_628310                     45652  0 -     53123 I
e Semnopithecus_priam.k141_368201                           10107  0 -     20692 I
e Semnopithecus_johnii.k141_1300894                          1368  0 +     13764 I
e Semnopithecus_hypoleucos.k141_2141024                      1351  0 -      8815 I
e Semnopithecus_entellus.k141_1743075                       45578  0 +     45790 I
e Rhinopithecus_strykeri.ctg241                            462135  0 +   1472273 I
e Rhinopithecus_bieti.k119_554384                            2917  0 -     17045 C
e Pygathrix_nigripes_a.k141_758202                             3050  0 -      8240 I
e Pygathrix_nigripes_b.ctg25                                14340869  0 -  15297009 I
e Pygathrix_cinerea.k141_951151                              3033  0 -      8225 I
e Presbytis_mitrata.k141_1767317                            10996  0 +     15869 I
e Presbytis_comata.k141_678168                              11007  0 +     11126 I
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000342.1                3428480  0 -   4356645 I
e Piliocolobus_kirkii.k141_451083                            4879  0 -     13367 I
e Piliocolobus_gordonorum.k141_736355                       29715  0 +     67079 I
e Piliocolobus_badius.k141_512007                           29798  0 +     37672 I
e Nasalis_larvatus.k141_1382660                              4275  0 +      5784 I
e Nannospalax_galili.KL201303.1                            241776  0 -    362372 I
e Colobus_polykomos.k141_1178012                               88  3 -     11758 I
e Colobus_guereza.LG08                                   96946830  0 - 156195979 I
e Colobus_angolensis.KN983490.1                            283936  0 +    886210 I
e Cephalopachus_bancanus.k141_702587                        12545  0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530  0 +    345090 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               18090 2 +    209709 C--T
s Acinonyx_jubatus.LLWD01000356.1                         2040037 1 +   3721120 C---
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10663997 1 +  23371972 c---
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7100523 1 -  16596857 c---
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_141108                   1774 1 -      7259 T---
i Allactaga_bullata.AllBul_scaffold_141108              C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   5964 2 -     60446 C--T
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         6680 2 -     29318 c--t
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         5618 2 +     38766 c--t
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          6574 2 -     80423 c--t
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              1558 2 +     19852 c--t
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                3802 2 -     12443 c--t
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                             1101 2 +      5070 c--t
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                  846 2 -      1641 c--t
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          3585 2 -     24210 c--t
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           30167 2 -     30219 c--t
i Alouatta_nigerrima.k141_2187093                       C 0 C 0
s Alouatta_palliata.k141_405616                              6003 2 +     16794 c--t
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                            1135 2 -      1470 c--t
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             5280 2 -      9835 c--t
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Aotus_azarae.k141_3170768                                 66890 2 +     78111 c--t
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            9838 2 +     22701 C--T
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5753794 2 +   9889416 c--t
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                            10393 2 -    104377 c--t
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                              10400 2 +     23246 C--T
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     3059 2 +     11424 T--T
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 I 1
s Arctocebus_calabarensis.k141_587554                        6982 2 +      9265 c--t
i Arctocebus_calabarensis.k141_587554                   I 3 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9543687 2 +  39197703 c--t
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             64961 2 +     85812 c--t
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                15974 2 +     89302 c--t
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             20475 2 -     58268 c--t
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             68469 2 +    119057 c--t
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              10438 2 -     25888 c--t
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                11501 2 -     16375 C--T
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               5117 2 +      6337 C--T
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Cacajao_ayresi.k141_724503                               118336 2 -    171031 C--T
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 17356 2 +    125063 C--T
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                19403 2 -    216513 C--T
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       11946 2 -    134917 C--T
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3223672 1 -   8989139 C---
i Camelus_bactrianus.KN276303.1                         I 1 C 0
s Camelus_dromedarius.KN271192.1                           401373 1 -  15254737 c---
i Camelus_dromedarius.KN271192.1                        I 1 C 0
s Camelus_ferus.KB016973.1                                2977110 1 +   6889770 C---
i Camelus_ferus.KB016973.1                              I 1 C 0
s CanFam4.chr31                                          11526862 1 +  39901454 C---
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   21836 1 +     87036 C---
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11273545 1 -  35597290 c---
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11096256 1 +  39895921 c---
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16463041 1 -  44759192 c---
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capromys_pilorides.CapPil_scaffold_780116                    71 2 +      1571 T--C
i Capromys_pilorides.CapPil_scaffold_780116             C 0 I 3
s Castor_canadensis.CasCan_scaffold_1326                      517 2 -    202837 T--C
i Castor_canadensis.CasCan_scaffold_1326                C 0 I 4
s Cavia_aperea.AVPZ01000278.1                            15790210 1 -  24422027 ---T
i Cavia_aperea.AVPZ01000278.1                           C 0 I 3
s Cavia_porcellus.DS562889.1                             15802149 1 -  24440124 ---T
i Cavia_porcellus.DS562889.1                            C 0 I 3
s Cavia_tschudii.CavTsc_scaffold_488                       180321 1 +    436027 ---T
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 I 3
s Catagonus_wagneri.CatWag_scaffold_1305                   163175 1 -    276539 C---
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 I 1
s Cebus_albifrons.Contig22                               18896063 2 -  29618158 c--t
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                12713 2 -     26817 c--t
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                16957 2 +     25043 c--t
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4368366 1 +   7569818 c---
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         8123 1 -      9338 C---
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6559904 2 +   6739814 c--t
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      31381 2 +     60454 c--t
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          6585 2 -     21101 c--t
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         63895 2 -    107033 c--t
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        6758 2 -     17608 c--t
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          3923 2 +     45019 c--t
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           4199 2 +     15177 c--t
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          6805 2 +     16677 c--t
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           28995 2 +     35983 c--t
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11995526 2 +  12117833 c--t
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46482502 2 +  46592721 c--t
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                        619 2 -     27215 c--t
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       6819 2 +     35577 c--t
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        6613 2 -     25661 c--t
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        6785 2 -     17744 c--t
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        26154 2 +     37128 c--t
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           63710 2 -     68416 C--T
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                           12830 2 +     13308 C--T
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                             9999 2 -     18223 C--T
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              1737 2 +    188999 C--T
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           46036 2 +     57117 C--T
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          50716 2 +     54541 C--T
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15964907 2 +  43084221 t--t
i Chinchilla_lanigera.JH721867.1                        C 0 I 3
s Chiropotes_israelita.k141_1189915                         75517 2 +    196370 c--t
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          19698 2 +     40510 c--t
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15144339 2 -  15256731 c--t
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      38803 2 -     53260 c--t
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101149362 2 + 101219884 c--t
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                19225 1 -     21363 C---
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           764529 1 +    964067 C---
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_954668              1445 1 -      1738 C---
i Chrysochloris_asiatica.ChrAsi_scaffold_954668         I 1 C 0
s Condylura_cristata.JH655880.1                          60622652 1 +  78930452 C---
i Condylura_cristata.JH655880.1                         C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 283168 2 -    399297 A--T
i Cricetomys_gambianus.CriGam_scaffold_949              I 1 I 1
s Cricetulus_griseus.LT883672.1                          53035521 2 +  72327488 A--g
i Cricetulus_griseus.LT883672.1                         C 0 I 1
s Crocidura_indochinensis.CroInd_scaffold_27484              2622 1 -     22648 T---
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            58016 1 -     70449 C---
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  214792 2 -    956709 T--T
i Ctenodactylus_gundi.CteGun_scaffold_447               I 2 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 36457 2 -     67205 T--T
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 I 3
s Cuniculus_paca.CunPac_flattened_line_16637                21396 1 +     26546 ---T
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 I 3
s Dasyprocta_punctata.DasPun_flattened_line_634             62535 1 -    236241 ---T
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 I 3
s Daubentonia_madagascariensis.ctg11                     16849663 1 +  31942871 ---t
i Daubentonia_madagascariensis.ctg11                    I 1 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 326768 1 +    993696 c---
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   7400 1 +    151128 C---
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   160378 2 +    228994 T--T
i Dinomys_branickii.DinBra_scaffold_1996                I 223 I 3
s Dolichotis_patagonum.DolPat_scaffold_14102                41111 1 -     73477 ---T
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 I 3
s Dipodomys_ordii.KN672545.1                              3660826 1 +   4240102 A---
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  3200 1 -     11986 A---
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 C 0
s Echinops_telfairi.JH980316.1                           23000439 1 -  44670279 C---
i Echinops_telfairi.JH980316.1                          I 1 C 0
s Elephantulus_edwardii.JH947210.1                        7834693 1 +  15467074 C---
i Elephantulus_edwardii.JH947210.1                      I 1 C 0
s Ellobius_lutescens.LOEQ01003611.1                        244334 2 -    369425 A--G
i Ellobius_lutescens.LOEQ01003611.1                     C 0 I 1
s Ellobius_talpinus.LOJH01076532.1                            665 2 +      9159 A--G
i Ellobius_talpinus.LOJH01076532.1                      C 0 I 1
s Enhydra_lutris.KZ291749.1                              85877986 1 +  99434291 c---
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4709482 1 +   6522550 A---
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5856860 1 -   7175178 c---
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13355346 1 +  41866177 c---
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          16836 1 +     92910 c---
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11541788 1 +  16010500 C---
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48781372 2 -  48907691 c--t
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eulemur_albifrons.k141_715837                              9806 2 +     13586 C--C
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_1015201                              3065 2 -      4292 C--T
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            16202 2 +     36558 C--T
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            12524 2 +     60246 C--T
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                16009 2 +    109717 C--T
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 3992 2 -     19505 C--T
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                20667 2 +     27497 C--C
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           23123 2 +     26808 C--T
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                37855 2 +     46535 C--T
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              20596 2 -     29447 C--T
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Fukomys_damarensis.KN123630.1                          13896677 1 -  19261668 ---t
i Fukomys_damarensis.KN123630.1                         C 0 I 3
s Felis_catus.CM001386.2                                129899457 1 - 159252932 C---
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129286432 1 - 158578461 C---
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 27531 1 +     52776 C---
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Galago_moholi.ctg555                                     215829 2 -    847004 C--T
i Galago_moholi.ctg555                                  I 3 C 0
s Galago_senegalensis.k141_964197                           18190 2 -     43889 C--T
i Galago_senegalensis.k141_964197                       I 3 C 0
s Galagoides_demidoff.k141_1769638                          15334 2 +     27357 C--T
i Galagoides_demidoff.k141_1769638                      I 3 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               160104 2 +    324696 c--t
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           17006 1 -     18683 T---
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               9788 2 -     14630 C--T
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119656888 2 - 195582420 c--t
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   80318 1 +    118900 T---
i Graphiurus_murinus.GraMur_scaffold_4493               I 1 C 0
s Hapalemur_alaotrensis.k141_1280836                         6598 2 +     10286 A--T
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             5076 2 -     11661 A--T
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                            10403 2 +     56096 A--T
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        33652 2 -     42470 A--T
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        50275 2 -     54384 A--T
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              23154 1 +     53719 C---
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2561173 2 +  31725842 g--t
i Heterocephalus_glaber.JH602058.1                      C 0 I 3
s Heterohyrax_brucei.HetBruBak_scaffold_25354               63401 1 +     73687 C---
i Heterohyrax_brucei.HetBruBak_scaffold_25354           I 1 C 0
s Hoolock_leuconedys.ctg79                                      9703 2 -   7690867 c--t
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           21772 1 -    119109 ---T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 I 3
s Hyaena_hyaena.HyaHya_flattened_line_20729                 23627 1 -     67322 C---
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hylobates_abbotti.k141_1816750                             2274 2 +      3202 C--T
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1136966                               283 2 +      9785 C--T
i Hylobates_agilis.k141_1136966                         C 0 C 0
s Hylobates_klossii.k141_468230                              3763 2 +      5464 C--T
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14629109 2 -  25970782 C--T
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            1661 2 +      4161 C--T
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             37217 2 -     60944 C--T
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                    10076 2 +     22540 T--T
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7130901 4 +  13083262 tatt
i Ictidomys_tridecemlineatus.JH393315.1                 I 1 I 1
s Indri_indri.k141_2197838                                   2118 2 +      3484 C--T
i Indri_indri.k141_2197838                              C 0 C 0
s Jaculus_jaculus.JH725517.1                              8579513 1 +  11848649 t---
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Lagothrix_lagothricha.k141_12968                          54558 2 -    147782 C--T
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    6060 1 +     26176 T---
i Lasiurus_borealis.LasBor_scaffold_59542               I 2 C 0
s Lemur_catta.scaffold_1                                258411950 2 - 285822530 A--T
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        29256 2 +     39228 C--T
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            58620 2 +     63517 C--T
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        37000 2 -     38897 C--T
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      3046 2 -     13103 C--T
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3091959 1 -   3498232 c---
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    21577 2 +     22452 C--T
i Lepus_americanus.LepAme_scaffold_62849                I 186 I 1
s Lophocebus_aterrimus.ctg55                             19252993 2 +  19376315 c--t
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           15792 2 +     84689 C--T
i Loris_lydekkerianus.k141_550999                       I 3 C 0
s Loris_tardigradus.ctg97                                 3783530 2 +   6799190 C--T
i Loris_tardigradus.ctg97                               I 3 C 0
s Loxodonta_africana.GL010040.1                          20599326 1 -  62548349 C---
i Loxodonta_africana.GL010040.1                         I 1 C 0
s Lycaon_pictus.CM007556.1                               11095712 1 +  39895028 c---
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             24744 2 +     74745 C--T
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12711205 2 +  12821369 C--T
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                3778 2 -     26467 C--T
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           51649 2 +     63263 C--T
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 3759 2 -     26361 C--T
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 6949 2 -      7381 C--T
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  50178 2 -     79256 C--T
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196040276 2 + 196197964 c--t
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11450446 2 +  11645122 c--t
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   9132 2 -     46448 C--T
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                6795 2 -     13212 C--T
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 20475 2 -     55006 C--T
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43845590 2 +  43892939 C--T
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               21759 2 -     24607 C--T
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               9129 2 -     27140 C--T
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43442165 2 -  43563597 c--t
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4454969 2 -   4543643 c--t
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            152670 1 +    252755 c---
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             40264 1 +     58827 c---
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36878768 4 +  64221397 tttt
i Marmota_marmota.CZRN01000005.1                        I 1 I 1
s Mellivora_capensis.MelCap_flattened_line_15433             7089 1 -     87323 C---
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1052045 2 -  26018355 A--G
i Mesocricetus_auratus.KB708139.1                       C 0 I 1
s Microcebus_murinus.CM007691.1                          16514981 2 +  47401472 c--t
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  42007 1 -     48017 C---
i Microgale_talazaci.MicTal_scaffold_34660              I 1 C 0
s Microtus_ochrogaster.CM001673.1                        22825132 2 -  98408828 A--G
i Microtus_ochrogaster.CM001673.1                       C 0 I 1
s Miniopterus_natalensis.LDJU01000022.1                   8213524 1 +  10048721 A---
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            38015 1 +     45743 G---
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         6711 2 +     29742 C--T
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        17455 1 -    104932 C---
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     5664 2 -     12809 C--T
i Mirza_zaza.k141_593947                                C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  150831 1 -    168139 C---
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          24936 1 -    100666 A---
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70772391 2 +  92629107 a--t
i Mus_caroli.LT608236.1                                 C 0 I 1
s Mus_musculus.chr16                                     75494446 2 +  98207768 a--t
i Mus_musculus.chr16                                    C 0 I 1
s Mus_pahari.LT608305.1                                  67561199 2 +  89017189 a--t
i Mus_pahari.LT608305.1                                 C 0 I 1
s Mus_spretus.CM004110.1                                 74337169 2 +  97876770 a--t
i Mus_spretus.CM004110.1                                C 0 I 1
s Muscardinus_avellanarius.MusAve_scaffold_9643             15409 2 +     98495 t--t
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4429195 1 -  28371801 t---
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     96174 2 -    117718 T--T
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 I 3
s Myotis_brandtii.KE161952.1                               971814 1 +   8389877 A---
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5023228 1 +   6462685 A---
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3469320 1 -   3747815 A---
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        14553 1 +     66751 A---
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             8192 1 -      8794 C---
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4490853 1 -  14209539 c---
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Nomascus_annamensis.k141_762468                             780 2 -      2755 c--t
i Nomascus_annamensis.k141_762468                       C 0 C 0
s Nomascus_concolor.k141_256540                              7392 2 -      8966 c--t
i Nomascus_concolor.k141_256540                         C 0 C 0
s Nomascus_gabriellae.k141_1400361                           1331 2 -      2203 c--t
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_453                             6643 2 +     12787 c--t
i Nomascus_siki_b.tarseq_453                        C 0 C 0
s Nomascus_siki_a.k141_421408                                  1245 2 +     16235 c--t
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                38577 1 +   3668941 c---
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65572455 2 -  95554990 C--T
i Nycticebus_bengalensis.LG16                           I 3 C 0
s Nycticebus_coucang.k141_6040852                              92 2 +      1868 C--T
i Nycticebus_coucang.k141_6040852                       I 84 I 54
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65680643 2 +  89412551 C--T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     I 3 C 0
s Ochotona_princeps.JH802095.1                            5000631 2 -  23139505 c--t
i Ochotona_princeps.JH802095.1                          I 193 C 0
s Octodon_degus.JH651621.1                                3691514 2 +  10294119 T--T
i Octodon_degus.JH651621.1                              C 0 I 3
s Odobenus_rosmarus.KB229369.1                             685557 1 -   3126709 c---
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  43814 2 +     62360 A--G
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 I 1
s Orycteropus_afer.OryAfe_flattened_line_13509              64724 1 -     66828 c---
i Orycteropus_afer.OryAfe_flattened_line_13509          I 3 C 0
s Oryctolagus_cuniculus.CM000803.1                      141884593 2 + 163896628 c--t
i Oryctolagus_cuniculus.CM000803.1                      I 185 I 1
s Otocyon_megalotis.JAEUCK010005121.1                      315715 1 -    505867 t---
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        5691 2 -     53940 C--T
i Otolemur_crassicaudatus.k141_505435                   I 3 C 0
s Otolemur_garnettii.GL873528.1                          18013660 2 -  38779656 C--T
i Otolemur_garnettii.GL873528.1                         I 3 C 0
s Pan_paniscus.CM003386.1                               127579067 2 - 205426864 c--t
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120156227 2 - 196562556 c--t
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  40451 1 +    295523 C---
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3644266 1 +  18214204 C---
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5033914 1 -   6340057 C---
i Panthera_tigris.KE721879.1                            C 0 C 0
s Papio_anubis.CM001492.2                               188160954 2 - 188283584 c--t
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              4044 2 +     25005 c--t
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47518326 2 +  47705337 c--t
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 72317 2 -    104429 c--t
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   10849 2 +     14967 c--t
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 6714 2 -      7628 c--t
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    121933 1 -    135482 C---
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          11355 2 -     23713 C--T
i Perodicticus_ibeanus.k141_117958                      I 3 C 0
s Perodicticus_potto.k141_1136815                           12506 2 +     61070 C--T
i Perodicticus_potto.k141_1136815                       I 3 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       2822 2 +     49596 T--T
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4955983 2 -   8017169 A--G
i Peromyscus_maniculatus.KI615518.1                     C 0 I 1
s Petromus_typicus.PetTyp_scaffold_33007                    17516 2 -     36578 C--T
i Petromus_typicus.PetTyp_scaffold_33007                I 1 I 3
s Pipistrellus_pipistrellus.PipPip_scaffold_3306           100098 1 +    112873 A---
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       26648 2 +     44506 C--T
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        26861 2 +     67491 C--T
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      17100 2 -     98129 C--T
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     26701 2 +    147771 C--T
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         3336 2 -     43940 C--T
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          7419 2 -     55515 C--T
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         26773 2 +    152463 C--T
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       4581 2 -    119457 C--T
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         16495 2 +    134592 C--T
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          27083 2 -     75465 C--T
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              191698 2 -    373494 c--t
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19812345 2 +  19899266 c--t
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                4507 1 -      9567 C---
i Procavia_capensis.ProCapCap_scaffold_149274           I 1 C 0
s Prolemur_simus.MPIZ01000048.1                           6853324 2 +  12164890 a--t
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     22131 2 -     30946 N--N
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         8409 2 +     11805 C--T
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           47743 2 +     52369 C--T
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         40130 2 -     44753 C--T
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            22053 2 +     27322 C--T
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       21702 2 -     53241 C--T
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         43965 2 -     48185 C--T
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        250842 1 -    344369 C---
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Puma_concolor.QAVW01000427.1                          131540563 1 - 161321710 C---
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Rattus_norvegicus.chr11                                13918208 2 +  90463843 a--t
i Rattus_norvegicus.chr11                               C 0 I 1
s Saimiri_boliviensis.NW_024100938.1                     15677105 2 -  43202129 c--t
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        9018 2 +     34089 C--T
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              8958 2 -     60842 C--T
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              9052 2 +     67014 C--T
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              9029 2 +     60816 C--T
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 8966 2 -     76454 C--T
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17345751 2 -  30362882 c--t
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         25072 2 -     62485 c--t
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   40108 1 -    114521 C---
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  105984 2 -    120886 A--A
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 I 3
s Solenodon_paradoxus.SolPar_flattened_line_1012            24089 1 +    739146 C---
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17774317 1 -  27805282 C---
i Sorex_araneus.JH798170.1                              C 0 I 2
s Spermophilus_dauricus.KZ294190.1                        2244602 4 +   2842873 tatt
i Spermophilus_dauricus.KZ294190.1                      I 1 I 1
s Spilogale_gracilis.SpiGra_flattened_line_905             239632 1 -    276980 C---
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            33746 1 +     62062 C---
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189275500 1 + 218635234 C---
i Sus_scrofa.CM000824.4                                 C 0 I 1
s Symphalangus_syndactylus.tarseq_24                        19368 2 -  13920577 C--T
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                2877 1 +     20549 A---
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               17865 1 +     45698 C---
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      811347 1 +   1148477 C---
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  61989 1 +     99546 C---
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194012487 2 - 194193292 c--t
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Trichechus_manatus.JH594618.1                          16090397 1 +  31416278 C---
i Trichechus_manatus.JH594618.1                         I 1 C 0
s Tupaia_chinensis.KB320831.1                             2801671 1 -   3938065 C---
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                   10494 1 +     13056 C---
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                     579 1 +    136657 C---
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 C 0
s Ursus_maritimus.KK498671.1                              6521265 1 +  28682327 c---
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                  9967 2 -     20643 C--T
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             29502 2 -     33872 C--T
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1528780 1 -   2331223 C---
i Vicugna_pacos.KN269600.1                              I 1 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                144942 1 -    281493 C---
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       132099 2 -    134049 T--T
i Xerus_inauris.XerIna_scaffold_7898                    I 1 I 1
s Zalophus_californianus.ZalCal_flattened_line_4097        220414 1 -    227762 C---
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_202118                     1591 1 -      3360 T---
i Zapus_hudsonius.ZapHud_scaffold_202118                C 0 C 0
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           5186 0 -      6963 C
e Ziphius_cavirostris.ZipCav_flattened_line_60625            2480 0 -     13665 C
e Tursiops_truncatus.MRVK01000923.1                      69317741 0 -  96451834 C
e Tragulus_javanicus.TraJav_scaffold_14717                   9488 743 +     90398 I
e Tonatia_saurophila.TonSau_scaffold_3334                  138634 910 -    259118 I
e Tolypeutes_matacus.TolMat_scaffold_475685                  1033 0 -      3104 C
e Saiga_tatarica.SaiTat_scaffold_371890                      1466 0 -      4338 C
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Rhinolophus_sinicus.LVEH01000179.1                      1793130 1032 +   2252614 I
e Rangifer_tarandus.RanTarSib_scaffold_24239                21057 0 +     68503 C
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Pteronotus_parnellii.KE867983.1                            6623 911 -     27784 I
e Platanista_gangetica.PlaMin_flattened_line_72990           9955 0 +     21690 C
e Phocoena_phocoena.PhoPho_flattened_line_53071              3478 0 +      8220 C
e Pantholops_hodgsonii.KE114631.1                         1072070 0 -   1292953 C
e Ovis_canadensis.OviCan_scaffold_6251                      84433 0 +    140051 C
e Ovis_aries.CM001582.2                                 134083199 0 - 275406953 C
e Orcinus_orca.KB316965.1                                 7229011 0 -   7562323 C
e Okapia_johnstoni.LVCL01S0017931.1                         42261 0 +     78940 C
e Odocoileus_virginianus.KZ101650.1                       1084192 0 +   1425656 C
e Noctilio_leporinus.NocLep_scaffold_12062                  51065 1131 +     94413 I
e Neophocaena_asiaeorientalis.KZ688543.1                  3955337 0 -   4490290 C
e Moschus_moschiferus.MosMos_scaffold_78805                  6762 0 -     19904 C
e Mormoops_blainvillei.MorMeg_scaffold_2952                163987 895 +    265003 I
e Monodon_monoceros.MonMon_M_scaffold_5598                 150746 0 +    154973 C
e Micronycteris_hirsuta.MicHir_scaffold_37978               25464 902 -     32043 I
e Mesoplodon_bidens.MesBid_scaffold_96348                    2972 0 -     12939 C
e Megaderma_lyra.MegLyr_scaffold_3562                       66105 943 -    234502 I
e Lipotes_vexillifer.KE558548.1                            140315 0 +   3060487 C
e Kogia_breviceps.KogBre_flattened_line_35920               28000 0 +     37189 C
e Inia_geoffrensis.IniGeo_flattened_line_66725              13381 0 +     17520 C
e Hipposideros_galeritus.HipGal_scaffold_7653                6123 1471 +     86108 I
e Hipposideros_armiger.JXIK01001085.1                      283559 1549 -    477199 I
e Hippopotamus_amphibius.HipAmp_scaffold_1308              151182 0 +    277961 C
e Hemitragus_hylocrius.HemHyl_scaffold_16669                33413 0 -     91191 C
e Giraffa_tippelskirchi.LVKQ01S012154.1                    186520 0 -    189561 C
e Eubalaena_japonica.EubJap_flattened_line_7756             65850 0 +     89355 C
e Eschrichtius_robustus.EscRob_flattened_line_685          319393 0 +    330699 C
e Elaphurus_davidianus.JRFZ01086400.1                     1496745 0 +   1727528 C
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Desmodus_rotundus.KZ672188.1                           18701716 1050 -  18957592 I
e Delphinapterus_leucas.KZ290064.1                       80041153 0 -  96802777 C
e Dasypus_novemcinctus.JH568778.1                          186259 0 -   6883506 C
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         3027 905 -      5782 I
e Carollia_perspicillata.CarPer_scaffold_4436               62503 910 +     67245 I
e Capra_hircus.CM004562.1                               135712363 0 - 157403528 C
e Capra_aegagrus.CM003214.1                              21334008 0 + 157394656 C
e Bubalus_bubalis.KI419065.1                               675356 0 +   1914593 C
e Bos_taurus.CM000177.6                                  22665419 0 + 158972876 C
e Bos_mutus.JH883513.1                                     419006 0 +    998990 C
e Bos_indicus.CM003021.1                                 22956765 0 + 161108492 C
e Bison_bison.KN264915.1                                   302667 0 -   6870073 C
e Beatragus_hunteri.BeaHun_scaffold_21644                   48528 0 -     72089 C
e Balaenoptera_bonaerensis.DF502048.1                        9723 0 -     13118 C
e Balaenoptera_acutorostrata.KI537095.1                  26384550 0 +  51448160 C
e Artibeus_jamaicensis.ArtJam_scaffold_41619                11489 929 -     29036 I
e Antilocapra_americana.AntAmePen_scaffold_27338             3496 0 +     55446 C
e Anoura_caudifer.AnoCau_scaffold_422                      393081 1052 -    631301 I
e Ammotragus_lervia.NIVO01013474.1                        3526064 0 +   4113121 C
e Trachypithecus_pileatus.k141_532233                       30126 0 -     40754 I
e Trachypithecus_phayrei.ctg364                            232455 0 -   1198723 I
e Trachypithecus_obscurus.k141_411399                         131 0 +     12010 I
e Trachypithecus_melamera.k141_950981                        2232 0 -      3512 I
e Trachypithecus_leucocephalus.k141_352489                   1214 0 +      9423 I
e Trachypithecus_laotum.k141_897381                         45646 0 -     53586 I
e Trachypithecus_hatinhensis.k141_641377                     1240 0 +      1365 I
e Trachypithecus_germaini.k141_240878                        5067 3 -     24955 I
e Trachypithecus_geei.k141_137495                           30106 0 -     42322 I
e Trachypithecus_francoisi.k141_1012484                       874 0 +      8809 I
e Trachypithecus_cristatus.k141_968903                      32589 3 +     43409 I
e Trachypithecus_crepusculus.k141_863597                     4944 0 -     23436 I
e Trachypithecus_auratus.k141_672638                         4947 3 +     38635 I
e Tarsius_wallacei.k141_48636                               64696 0 +     65473 C
e Tarsius_lariang.k141_609102                               31387 0 +     42269 C
e Semnopithecus_vetulus.k141_748269                          4706 0 +     17284 I
e Semnopithecus_schistaceus.k141_628310                     45652 0 -     53123 I
e Semnopithecus_priam.k141_368201                           10107 0 -     20692 I
e Semnopithecus_johnii.k141_1300894                          1368 0 +     13764 I
e Semnopithecus_hypoleucos.k141_2141024                      1351 0 -      8815 I
e Semnopithecus_entellus.k141_1743075                       45578 0 +     45790 I
e Rhinopithecus_strykeri.ctg241                            462135 0 +   1472273 I
e Rhinopithecus_bieti.k119_554384                            2917 0 -     17045 C
e Pygathrix_nigripes_a.k141_758202                             3050 0 -      8240 I
e Pygathrix_nigripes_b.ctg25                                14340869 0 -  15297009 I
e Pygathrix_cinerea.k141_951151                              3033 0 -      8225 I
e Psammomys_obesus.NESX01026517.1                           39552 0 +     77221 C
e Presbytis_mitrata.k141_1767317                            10996 0 +     15869 I
e Presbytis_comata.k141_678168                              11007 0 +     11126 I
e Pithecia_vanzolinii.k141_831006                           15424 0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514 0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521 0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292 0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093 0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038 0 +     78826 C
e Pithecia_albicans.k141_991845                             45662 0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000342.1                3428480 0 -   4356645 I
e Piliocolobus_kirkii.k141_451083                            4879 0 -     13367 I
e Piliocolobus_gordonorum.k141_736355                       29715 0 +     67079 I
e Piliocolobus_badius.k141_512007                           29798 0 +     37672 I
e Ondatra_zibethicus.OndZib_scaffold_6821                  130931 0 +    145789 C
e Nasalis_larvatus.k141_1382660                              4275 0 +      5784 I
e Nannospalax_galili.KL201303.1                            241776 0 -    362372 I
e Meriones_unguiculatus.MerUng_scaffold_9483                 2575 0 +    115071 C
e Colobus_polykomos.k141_1178012                               88 3 -     11758 I
e Colobus_guereza.LG08                                   96946830 0 - 156195979 I
e Colobus_angolensis.KN983490.1                            283936 0 +    886210 I
e Cephalopachus_bancanus.k141_702587                        12545 0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530 0 +    345090 C
e Acomys_cahirinus.AcoCah_scaffold_1625                    118388 0 -    189883 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               18092 13 +    209709 T-T--C--ATA--A--T---T-----C-A-A-A
s Acinonyx_jubatus.LLWD01000356.1                         2040038 14 +   3721120 CTT--T--ACG--A--T---T-----C-A-A-C
i Acinonyx_jubatus.LLWD01000356.1                       C 0 I 855
s Acomys_cahirinus.AcoCah_scaffold_1625                    118388 13 -    189883 --A--T--ACT--A--T---A-----T-A-AAA
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10663998 14 +  23371972 ttt--t--atg--a--t---t-----c-a-A-C
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 I 838
s Ailurus_fulgens.LNAC01000003.1                          7100524 14 -  16596857 ttt--t--atg--a--t---t-----c-A-A-C
i Ailurus_fulgens.LNAC01000003.1                        C 0 I 1266
s Allactaga_bullata.AllBul_scaffold_141108                   1775 15 -      7259 T-T--TCTATA--T--T---A-----C-A-G-A
i Allactaga_bullata.AllBul_scaffold_141108              C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   5966 13 -     60446 T-T--C--ATT--A--T---T-----C-A-A-A
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         6682 13 -     29318 t-T--C--ATT--A--T---T-----C-A-A-A
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         5620 13 +     38766 t-T--C--ATT--A--T---T-----C-A-A-A
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          6576 13 -     80423 t-T--C--ATT--A--T---T-----C-A-A-A
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              1560 13 +     19852 t-C--C--ATT--A--C---T-----C-A-A-A
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                3804 13 -     12443 t-C--C--ACT--A--C---T-----C-A-A-A
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                             1103 13 +      5070 t-C--C--ATT--A--C---T-----C-A-A-A
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                  848 13 -      1641 t-C--C--ATT--A--C---T-----C-A-A-A
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          3587 13 -     24210 t-C--C--ATT--A--C---T-----C-A-A-A
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_2187093                           30169 13 -     30219 t-C--C--ATT--A--C---T-----C-A-A-A
i Alouatta_nigerrima.k141_2187093                       C 0 N 0
s Alouatta_palliata.k141_405616                              6005 13 +     16794 t-C--C--ATT--A--C---T-----C-A-A-A
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                            1137 13 -      1470 t-C--C--ATT--A--C---T-----C-A-A-A
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             5282 13 -      9835 t-C--C--ATT--A--C---T-----C-A-A-A
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3526064  2 +   4113121 -------------T--T----------------
i Ammotragus_lervia.NIVO01013474.1                      C 0 I 1981
s Antilocapra_americana.AntAmePen_scaffold_27338             3496  2 +     55446 -------------T--T----------------
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 I 1710
s Aotus_azarae.k141_3170768                                 66892 13 +     78111 t-T--C--ATT--A--T---T-----C-A-A-A
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            9840 13 +     22701 T-T--C--ATT--A--T---T-----C-A-A-A
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5753796 13 +   9889416 t-t--c--att--a--t---t-----c-a-a-A
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                            10395 13 -    104377 t-T--C--ATT--A--T---T-----C-A-A-A
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                              10402 13 +     23246 T-T--C--ATT--A--T---T-----C-A-A-A
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     3062 13 +     11424 T-T--T--TTA--A--T---A-----G-A-A-A
i Aplodontia_rufa.AprRuf_scaffold_101456                I 1 C 0
s Arctocebus_calabarensis.k141_587554                        6984 13 +      9265 T-T--C--ATA--A--T---T-----C-A-A-A
i Arctocebus_calabarensis.k141_587554                   C 0 I 1
s Ateles_geoffroyi_b.tarseq_2582                             9543689 13 +  39197703 t-T--C--ATT--A--T---T-----C-A-A-A
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             64963 13 +     85812 t-T--C--ATT--A--T---T-----C-A-A-A
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                15976 13 +     89302 t-T--C--ATT--A--T---T-----C-A-A-A
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             20477 13 -     58268 t-T--C--ATT--A--T---T-----C-A-A-A
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             68471 13 +    119057 t-T--C--ATT--A--T---T-----C-A-A-A
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              10440 13 -     25888 t-T--C--ATT--A--T---T-----C-A-A-A
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                11503 13 -     16375 T-C--T--ATA--A--T---T-----C-A-A-A
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               5119 13 +      6337 T-C--T--ATA--A--T---T-----C-A-A-A
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26384550 13 +  51448160 T-T--C--ATG--T--T---T-----C-A-A-C
i Balaenoptera_acutorostrata.KI537095.1                 C 0 I 868
s Balaenoptera_bonaerensis.DF502048.1                        9723 13 -     13118 T-T--C--ATG--T--T---T-----C-A-A-C
i Balaenoptera_bonaerensis.DF502048.1                   C 0 I 868
s Beatragus_hunteri.BeaHun_scaffold_21644                   48528  2 -     72089 -------------T--T----------------
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 I 1486
s Bison_bison.KN264915.1                                   302667  2 -   6870073 -------------t--t----------------
i Bison_bison.KN264915.1                                C 0 I 2297
s Bos_indicus.CM003021.1                                 22956765  2 + 161108492 -------------t--t----------------
i Bos_indicus.CM003021.1                                C 0 I 2304
s Bos_mutus.JH883513.1                                     419006  2 +    998990 -------------t--t----------------
i Bos_mutus.JH883513.1                                  C 0 I 2243
s Bos_taurus.CM000177.6                                  22665419  2 + 158972876 -------------t--t----------------
i Bos_taurus.CM000177.6                                 C 0 I 2302
s Bubalus_bubalis.KI419065.1                               675356  2 +   1914593 -------------t--t----------------
i Bubalus_bubalis.KI419065.1                            C 0 I 1204
s Cacajao_ayresi.k141_724503                               118338 13 -    171031 T-T--C--ATT--A--T---T-----C-A-A-A
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 17358 13 +    125063 T-T--C--ATT--A--T---T-----C-A-A-A
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                19405 13 -    216513 T-T--C--ATT--A--T---T-----C-A-A-A
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       11948 13 -    134917 T-T--C--ATT--A--T---T-----C-A-A-A
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3223673 13 -   8989139 T-T--T--ATA--T--T---T-----C-A-A-C
i Camelus_bactrianus.KN276303.1                         C 0 I 852
s Camelus_dromedarius.KN271192.1                           401374 13 -  15254737 t-t--t--ata--t--t---t-----c-a-a-c
i Camelus_dromedarius.KN271192.1                        C 0 I 851
s Camelus_ferus.KB016973.1                                2977111 13 +   6889770 T-T--T--ATA--T--T---T-----C-A-A-C
i Camelus_ferus.KB016973.1                              C 0 I 852
s CanFam4.chr31                                          11526863 14 +  39901454 TTT--T--ATG--A--T---T-----G-A-A-C
i CanFam4.chr31                                         C 0 I 836
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   21837 14 +     87036 TTT--T--ATG--A--T---T-----G-A-A-C
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 I 836
s Canis_lupus_dingo.QKWQ01001993.1                       11273546 14 -  35597290 ttt--t--atg--a--t---t-----G-A-A-C
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 I 836
s Canis_lupus_familiaris.chr31                           11096257 14 +  39895921 ttt--t--atg--a--t---t-----G-A-A-C
i Canis_lupus_familiaris.chr31                          C 0 I 836
s Canis_lupus_orion.HG994411.1                           16463042 14 -  44759192 ttt--t--atg--a--t---t-----G-A-A-C
i Canis_lupus_orion.HG994411.1                          C 0 I 836
s Capra_aegagrus.CM003214.1                              21334008  2 + 157394656 -------------t--t----------------
i Capra_aegagrus.CM003214.1                             C 0 I 1470
s Capra_hircus.CM004562.1                               135712363  2 - 157403528 -------------T--T----------------
i Capra_hircus.CM004562.1                               C 0 I 1468
s Capromys_pilorides.CapPil_scaffold_780116                    76 10 +      1571 -------------A--TAATA-----A-A-A-C
i Capromys_pilorides.CapPil_scaffold_780116             I 3 C 0
s Castor_canadensis.CasCan_scaffold_1326                      523 11 -    202837 --------ATA--A--T---A-----C-GTA-A
i Castor_canadensis.CasCan_scaffold_1326                I 4 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   163177 13 -    276539 T-T--T--ATG--T--T---T-----C-A-A-C
i Catagonus_wagneri.CatWag_scaffold_1305                I 1 I 1111
s Cavia_aperea.AVPZ01000278.1                            15790214  8 -  24422027 -------------A--T--CA-----C-A-A-A
i Cavia_aperea.AVPZ01000278.1                           I 3 C 0
s Cavia_porcellus.DS562889.1                             15802153  8 -  24440124 -------------A--T--CA-----C-A-A-A
i Cavia_porcellus.DS562889.1                            I 3 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       180325  8 +    436027 -------------A--T--CA-----C-A-A-A
i Cavia_tschudii.CavTsc_scaffold_488                    I 3 C 0
s Cebus_albifrons.Contig22                               18896065 13 -  29618158 t-T--C--ATT--A--T---T-----C-A-A-A
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                12715 13 -     26817 t-T--C--ATT--A--T---T-----C-A-A-A
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                16959 13 +     25043 t-T--C--ATT--A--T---T-----C-A-A-A
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4368367 14 +   7569818 ttt--t--atg--a--t---t-----c-a-A-C
i Ceratotherium_simum.JH767818.1                        C 0 I 1126
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         8124 14 -      9338 TTT--T--ATG--A--T---T-----C-A-A-C
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 I 1126
s Cercocebus_atys.KQ010443.1                              6559906 13 +   6739814 t-t--c--att--a--t---t-----g-a-a-a
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      31383 13 +     60454 t-T--C--ATT--A--T---T-----G-A-A-A
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          6587 13 -     21101 t-T--C--ATT--A--T---T-----G-A-A-A
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         63897 13 -    107033 t-T--C--ATT--A--T---T-----G-A-A-A
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        6760 13 -     17608 t-T--C--ATT--A--T---T-----C-A-A-A
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          3925 13 +     45019 t-T--C--ATT--A--T---T-----C-A-A-A
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           4201 13 +     15177 t-T--C--ATT--A--T---T-----C-A-A-A
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          6807 13 +     16677 t-T--C--ATT--A--T---T-----C-A-A-A
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           28997 13 +     35983 t-T--C--ATT--A--T---T-----C-A-A-A
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11995528 13 +  12117833 t-T--C--ATT--A--T---T-----C-A-A-A
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46482504 13 +  46592721 t-T--C--ATT--A--T---T-----C-A-A-A
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                        621 13 -     27215 t-T--C--ATT--A--T---T-----C-A-A-A
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       6821 13 +     35577 t-T--C--ATT--A--T---T-----C-A-A-A
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        6615 13 -     25661 t-T--C--ATT--A--T---T-----C-A-A-A
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        6787 13 -     17744 t-T--C--ATT--A--T---T-----C-A-A-A
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        26156 13 +     37128 t-T--C--ATT--A--T---T-----C-A-A-A
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           5186 13 -      6963 -----T--ATA--AAAG---T-----T-T-G-C
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           63712 13 -     68416 T-T--T--ATA--A--T---T-----C-A-A-A
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                           12832 13 +     13308 T-T--T--ATA--A--T---T-----C-A-A-A
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                            10001 13 -     18223 T-T--C--ATT--A--T---T-----C-A-A-A
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              1739 13 +    188999 T-T--C--ATT--A--T---T-----C-A-A-A
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           46038 13 +     57117 T-T--C--ATT--A--T---T-----C-A-A-A
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          50718 13 +     54541 T-T--C--ATT--A--T---T-----C-A-A-A
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15964912 10 +  43084221 -------------g--taata-----a-a-a-t
i Chinchilla_lanigera.JH721867.1                        I 3 C 0
s Chiropotes_israelita.k141_1189915                         75519 13 +    196370 t-T--C--ATT--A--T---T-----C-A-A-A
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          19700 13 +     40510 t-T--C--ATT--A--T---T-----C-A-A-A
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15144341 13 -  15256731 t-T--C--ATT--A--T---T-----C-A-A-A
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      38805 13 -     53260 t-T--C--ATT--A--T---T-----C-A-A-A
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101149364 13 + 101219884 t-t--c--att--a--t---t-----c-a-a-A
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                19226 13 -     21363 T-T--T--ATG--A--T---T-----C-C-A-C
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           764530 13 +    964067 T-T--T--ATG--A--T---T-----C-C-A-C
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_954668              1446 14 -      1738 T-AAAT--AGA--A--T---T-----C-C-A--
i Chrysochloris_asiatica.ChrAsi_scaffold_954668         C 0 C 0
s Condylura_cristata.JH655880.1                          60622653 13 +  78930452 T-T--T--ACG--G--T---T-----T-A-A-C
i Condylura_cristata.JH655880.1                         C 0 I 894
s Cricetomys_gambianus.CriGam_scaffold_949                 283171 13 -    399297 T-A--T--ATT--A--T---A-----T-A-A-A
i Cricetomys_gambianus.CriGam_scaffold_949              I 1 C 0
s Cricetulus_griseus.LT883672.1                          53035524 13 +  72327488 t-a--t--aat--a--t---a-----t-a-a-a
i Cricetulus_griseus.LT883672.1                         I 1 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              2623 13 -     22648 T-G--T--ATG--A--T---T-----C-A-A-A
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 I 797
s Cryptoprocta_ferox.CryFer_flattened_line_19014            58017 14 -     70449 ATT--T--TTG--A--T---T-----C-A-A-C
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 I 888
s Ctenodactylus_gundi.CteGun_scaffold_447                  214794 13 -    956709 T-T--T--ATA--G--T---A-----C-A-A-A
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 36462 10 -     67205 -------------A--TAATA-----A-A-A-C
i Ctenomys_sociabilis.CteSoc_scaffold_19489             I 3 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                21400 10 +     26546 -------------A--TAATA-----A-A-A-A
i Cuniculus_paca.CunPac_flattened_line_16637            I 3 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             62539 10 -    236241 -------------A--TAATA-----A-A-A-A
i Dasyprocta_punctata.DasPun_flattened_line_634         I 3 C 0
s Dasypus_novemcinctus.JH568778.1                          186259  3 -   6883506 -----T--AT-----------------------
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16849664 13 +  31942871 t-T--T--ATA--A--T---T-----T-A-A-A
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80041153 13 -  96802777 T-T--T--ATG--T--T---T-----C-A-A-C
i Delphinapterus_leucas.KZ290064.1                      C 0 I 862
s Dicerorhinus_sumatrensis.PEKH010003161.1                 326769 14 +    993696 ttt--t--atg--a--T---T-----C-A-A-C
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 I 1123
s Diceros_bicornis.DicBicMic_scaffold_9545                   7401 14 +    151128 TTT--T--ATG--A--T---T-----C-A-A-C
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 I 1125
s Dinomys_branickii.DinBra_scaffold_1996                   160383 10 +    228994 -------------G--TGATA-----A-A-A-A
i Dinomys_branickii.DinBra_scaffold_1996                I 3 C 0
s Dipodomys_ordii.KN672545.1                              3660827 15 +   4240102 T-T--CAGATA--A--T---A-----C-A-A-A
i Dipodomys_ordii.KN672545.1                            C 0 I 1
s Dipodomys_stephensi.DipSte_scaffold_84338                  3201 15 -     11986 T-T--CAGATA--A--T---A-----C-A-A-A
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 I 1
s Dolichotis_patagonum.DolPat_scaffold_14102                41115 10 -     73477 -------------A--TAATA-----C-A-A-A
i Dolichotis_patagonum.DolPat_scaffold_14102            I 3 I 8
s Echinops_telfairi.JH980316.1                           23000440 12 -  44670279 T-T--T--ATG--A--G---T-----C-T-C--
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1496745  2 +   1727528 -------------T--T----------------
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 I 1214
s Elephantulus_edwardii.JH947210.1                        7834694 12 +  15467074 T-T--T--ATG--A--T---T-----T-C-A--
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        244337 13 -    369425 T-T--T--AAT--A--T---A-----T-A-A-C
i Ellobius_lutescens.LOEQ01003611.1                     I 1 C 0
s Ellobius_talpinus.LOJH01076532.1                            668 13 +      9159 T-A--T--AAT--A--T---A-----T-A-A-C
i Ellobius_talpinus.LOJH01076532.1                      I 1 C 0
s Enhydra_lutris.KZ291749.1                              85877987 14 +  99434291 ttt--t--atg--a--t---t-----c-A-A-C
i Enhydra_lutris.KZ291749.1                             C 0 I 849
s Eptesicus_fuscus.JH977687.1                             4709483 11 +   6522550 -----T--ATG--A--T---T-----C-A-A-C
i Eptesicus_fuscus.JH977687.1                           C 0 I 894
s Equus_asinus.JREZ01000062.1                             5856861 14 -   7175178 ttt--t--atg--a--t---t-----c-A-C-C
i Equus_asinus.JREZ01000062.1                           C 0 I 891
s Equus_caballus.CM000402.2                              13355347 14 +  41866177 ttt--t--atg--a--t---t-----c-A-C-C
i Equus_caballus.CM000402.2                             C 0 I 891
s Equus_przewalskii.ATBW01073585.1                          16837 14 +     92910 ttt--t--atg--a--t---t-----c-A-C-C
i Equus_przewalskii.ATBW01073585.1                      C 0 I 891
s Erinaceus_europaeus.JH835290.1                         11541789 13 +  16010500 T-T--T--GTG--A--T---T-----T-A-A-A
i Erinaceus_europaeus.JH835290.1                        C 0 I 1124
s Erythrocebus_patas.Contig8                             48781374 13 -  48907691 t-T--C--ATT--A--T---T-----C-A-A-A
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          319393 13 +    330699 T-T--C--ATG--T--T---T-----C-A-A-C
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 I 869
s Eubalaena_japonica.EubJap_flattened_line_7756             65850 13 +     89355 T-T--C--ATG--T--T---T-----C-A-A-C
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 I 868
s Eulemur_albifrons.k141_715837                              9808 13 +     13586 T-T--T--ATA--A--T---T-----C-A-A-A
i Eulemur_albifrons.k141_715837                         C 0 I 41
s Eulemur_collaris.k141_1015201                              3067 13 -      4292 T-T--T--ATA--A--T---T-----C-A-A-A
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            16204 13 +     36558 T-T--T--ATA--A--T---T-----C-A-A-A
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            12526 13 +     60246 T-T--T--ATA--A--T---T-----C-A-A-A
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                16011 13 +    109717 T-T--T--ATA--A--T---T-----C-A-A-A
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 3994 13 -     19505 T-T--T--ATA--A--T---T-----C-A-A-A
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                20669 13 +     27497 T-T--T--ATA--A--T---T-----C-A-A-A
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           23125 13 +     26808 T-T--T--ATA--A--T---T-----C-A-A-A
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                37857 13 +     46535 T-T--T--ATA--A--T---T-----C-A-A-A
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              20598 13 -     29447 T-T--T--ATA--A--T---T-----C-A-A-A
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129899458 14 - 159252932 CTT--T--ACG--A--T---T-----C-A-A-C
i Felis_catus.CM001386.2                                C 0 I 990
s Felis_catus_fca126.CM031420.1                         129286433 14 - 158578461 CTT--T--ACG--A--T---T-----C-A-A-C
i Felis_catus_fca126.CM031420.1                         C 0 I 855
s Felis_nigripes.FelNig_flattened_line_8080                 27532 14 +     52776 CTT--T--ACG--A--T---T-----C-A-A-C
i Felis_nigripes.FelNig_flattened_line_8080             C 0 I 859
s Fukomys_damarensis.KN123630.1                          13896681 10 -  19261668 -------------a--taata-----a-a-a-c
i Fukomys_damarensis.KN123630.1                         I 3 C 0
s Galago_moholi.ctg555                                     215831 13 -    847004 T-T--T--ATA--A--T---T-----C-A-A-A
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           18192 13 -     43889 T-T--T--ATA--A--T---T-----C-A-A-A
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          15336 13 +     27357 T-T--T--ATA--A--T---T-----C-A-A-A
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               160106 13 +    324696 t-t--t--atG--A--C---T-----C-A-A-A
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    186520  2 -    189561 -------------t--t----------------
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 I 1219
s Glis_glis.GliGli_scaffold_79770                           17007 13 -     18683 T-T--T--ATA--A--T---A-----T-A-A-A
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               9790 13 -     14630 T-T--C--ATT--A--T---T-----C-A-A-A
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119656890 13 - 195582420 t-t--c--att--a--t---t-----c-a-a-A
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   80319 13 +    118900 T-T--T--ATA--T--T---A-----T-A-A-A
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         6600  7 +     10286 T-T--T--ATA--A-------------------
i Hapalemur_alaotrensis.k141_1280836                    C 0 I 3
s Hapalemur_gilberti.k141_279011                             5078  7 -     11661 T-T--T--ATA--A-------------------
i Hapalemur_gilberti.k141_279011                        C 0 I 3
s Hapalemur_griseus.k141_1387522                            10405  7 +     56096 T-T--T--ATA--A-------------------
i Hapalemur_griseus.k141_1387522                        C 0 I 3
s Hapalemur_meridionalis.k141_186231                        33654  7 -     42470 T-T--T--ATA--A-------------------
i Hapalemur_meridionalis.k141_186231                    C 0 I 3
s Hapalemur_occidentalis.k141_797938                        50277  7 -     54384 T-T--T--ATA--A-------------------
i Hapalemur_occidentalis.k141_797938                    C 0 I 3
s Helogale_parvula.HelPar_flattened_line_22962              23155 14 +     53719 ATT--T--TTG--A--T---T-----C-A-A-C
i Helogale_parvula.HelPar_flattened_line_22962          C 0 I 866
s Hemitragus_hylocrius.HemHyl_scaffold_16669                33413  2 -     91191 -------------T--T----------------
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 I 1456
s Heterocephalus_glaber.JH602058.1                        2561178 10 +  31725842 -------------a--taata-----a-a-a-c
i Heterocephalus_glaber.JH602058.1                      I 3 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               63402 12 +     73687 T-T--T--ATG--A--T---C-----C-C-A--
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              151182 13 +    277961 T-T--T--ATG--T--T---T-----T-A-A-C
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 I 884
s Hoolock_leuconedys.ctg79                                      9705 13 -   7690867 t-T--C--ATT--T--T---T-----C-A-A-A
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 23628 14 -     67322 TTT--T--ATG--A--T---T-----C-A-A-C
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 I 826
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           21776 10 -    119109 -------------A--TAATA-----C-A-A-A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       I 3 C 0
s Hylobates_abbotti.k141_1816750                             2276 13 +      3202 T-T--C--ATT--T--T---T-----C-A-A-A
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1136966                               285 13 +      9785 T-T--C--ATT--T--T---T-----C-A-A-A
i Hylobates_agilis.k141_1136966                         C 0 C 0
s Hylobates_klossii.k141_468230                              3765 13 +      5464 T-T--C--ATT--T--T---T-----C-A-A-A
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14629111 13 -  25970782 T-T--C--ATT--T--T---T-----C-A-A-A
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            1663 13 +      4161 T-T--C--ATT--T--T---T-----C-A-A-A
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             37219 13 -     60944 T-T--C--ATT--T--T---T-----C-A-A-A
i Hylobates_pileatus_a.tarseq_592                         C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                    10078 13 +     22540 T-T--T--ATA--A--T---A-----A-A-A-A
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7130906 13 +  13083262 t-t--t--ata--a--t---a-----c-a-a-a
i Ictidomys_tridecemlineatus.JH393315.1                 I 1 C 0
s Indri_indri.k141_2197838                                   2120 13 +      3484 T-C--T--ATC--A--T---T-----C-A-A-A
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              13381 13 +     17520 T-T--T--ATG--T--T---T-----C-A-A-C
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 I 861
s Jaculus_jaculus.JH725517.1                              8579514 16 +  11848649 t-t--ttatta--t--t---a-----tga-a-a
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               28000 13 +     37189 T-T--T--ACG--T--T---T-----C-A-A-C
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 I 877
s Lagothrix_lagothricha.k141_12968                          54560 13 -    147782 T-T--C--ATT--A--T---T-----C-A-A-A
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    6061 11 +     26176 -----T--ATG--A--T---T-----G-A-A-C
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 I 883
s Lemur_catta.scaffold_1                                258411952 13 - 285822530 T-T--T--ATA--A--T---T-----C-A-A-A
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        29258 13 +     39228 T-C--T--TTA--A--T---T-----C-G-A-A
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            58622 13 +     63517 T-C--T--TTA--A--T---T-----C-G-A-A
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        37002 13 -     38897 T-C--T--TTA--A--T---T-----C-G-A-A
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      3048 13 -     13103 T-C--T--TTA--A--T---T-----C-G-A-A
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3091960 14 -   3498232 ttt--t--atg--a--t---t-----C-A-A-C
i Leptonychotes_weddellii.KB714749.1                    C 0 I 822
s Lepus_americanus.LepAme_scaffold_62849                    21580 11 +     22452 -----T--ATA--A--T---T-----C-A-A-A
i Lepus_americanus.LepAme_scaffold_62849                I 1 C 0
s Lipotes_vexillifer.KE558548.1                            140315 13 +   3060487 T-T--T--ATG--T--T---T-----C-A-A-C
i Lipotes_vexillifer.KE558548.1                         C 0 I 867
s Lophocebus_aterrimus.ctg55                             19252995 13 +  19376315 t-T--C--ATT--A--T---T-----G-A-A-A
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           15794 13 +     84689 T-T--T--ATA--A--T---T-----C-A-A-A
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3783532 13 +   6799190 T-T--T--ATA--A--T---T-----C-A-A-A
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20599327 12 -  62548349 T-T--T--ATG--A--T---T-----C-C-A--
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11095713 14 +  39895028 ttt--t--atg--a--t---t-----G-A-A-C
i Lycaon_pictus.CM007556.1                              C 0 I 836
s Macaca_arctoides.k141_2201161                             24746 13 +     74745 T-T--C--ATT--A--T---T-----C-A-A-A
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12711207 13 +  12821369 T-T--C--ATT--A--T---T-----C-A-A-A
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                3780 13 -     26467 T-T--C--ATT--A--T---T-----C-A-A-A
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           51651 13 +     63263 T-T--C--ATT--A--T---T-----C-A-A-A
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 3761 13 -     26361 T-T--C--ATT--A--T---T-----C-A-A-A
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 6951 13 -      7381 T-T--C--ATT--A--T---T-----C-A-A-A
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  50180 13 -     79256 T-T--C--ATT--A--T---T-----C-A-A-A
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196040278 13 + 196197964 t-t--c--att--a--t---t-----c-a-a-A
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11450448 13 +  11645122 t-t--c--att--a--t---t-----c-a-a-A
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   9134 13 -     46448 T-T--C--ATT--A--T---T-----C-A-A-A
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                6797 13 -     13212 T-T--C--ATT--A--T---T-----C-A-A-A
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 20477 13 -     55006 T-T--C--ATT--A--T---T-----C-A-A-A
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43845592 13 +  43892939 T-T--C--ATT--A--T---T-----C-A-A-A
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               21761 13 -     24607 T-T--C--ATT--A--T---T-----C-A-A-A
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               9131 13 -     27140 T-T--C--ATT--A--T---T-----C-A-A-A
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43442167 13 -  43563597 t-T--C--ATT--A--T---T-----G-A-A-A
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4454971 13 -   4543643 t-T--C--ATT--A--T---T-----G-A-A-A
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            152671  4 +    252755 ttt--t---------------------------
i Manis_javanica.JSZB01003966.1                         C 0 I 874
s Manis_pentadactyla.KN017078.1                             40265  4 +     58827 ttt--c---------------------------
i Manis_pentadactyla.KN017078.1                         C 0 I 884
s Marmota_marmota.CZRN01000005.1                         36878773 13 +  64221397 t-t--t--ata--a--t---a-----c-a-a-a
i Marmota_marmota.CZRN01000005.1                        I 1 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             7090 14 -     87323 TTT--T--ATG--A--T---T-----C-A-A-C
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 I 841
s Meriones_unguiculatus.MerUng_scaffold_9483                 2575 13 +    115071 --A--T--ATT--C--C---A-----T-A-AAA
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1052048 13 -  26018355 T-A--T--AAT--A--T---A-----T-C-A-A
i Mesocricetus_auratus.KB708139.1                       I 1 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    2972 13 -     12939 T-T--T--ATG--T--T---T-----C-A-A-C
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 I 861
s Microcebus_murinus.CM007691.1                          16514983 13 +  47401472 t-t--t--ata--a--t---t-----c-a-a-a
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  42008 12 -     48017 T-T--C--ATG--A--G---T-----C-T-C--
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22825135 13 -  98408828 T-A--T--AAT--A--T---A-----T-A-A-G
i Microtus_ochrogaster.CM001673.1                       I 1 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8213525 11 +  10048721 -----C--ATG--A--T---T-----C-A-A-C
i Miniopterus_natalensis.LDJU01000022.1                 C 0 I 995
s Miniopterus_schreibersii.MinSch_scaffold_24116            38016 11 +     45743 -----C--ATG--A--T---T-----C-A-A-C
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 I 962
s Miopithecus_ogouensis.k141_2935907                         6713 13 +     29742 T-T--C--ATT--A--T---T-----C-A-A-A
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        17456 14 -    104932 TTT--T--ATG--A--T---T-----C-A-A-C
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 I 822
s Mirza_zaza.k141_593947                                     5666 13 -     12809 T-T--T--ATA--A--T---T-----C-A-A-A
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 150746 13 +    154973 T-T--T--ATG--T--T---T-----C-A-A-C
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 I 862
s Moschus_moschiferus.MosMos_scaffold_78805                  6762  2 -     19904 -------------T--T----------------
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 I 1585
s Mungos_mungo.MunMun_flattened_line_8729                  150832 14 -    168139 ATT--T--TTG--A--T---T-----C-A-A-C
i Mungos_mungo.MunMun_flattened_line_8729               C 0 I 928
s Murina_feae.MurFea_scaffold_2254                          24937 11 -    100666 -----T--ATG--A--T---T-----C-A-A-C
i Murina_feae.MurFea_scaffold_2254                      C 0 I 749
s Mus_caroli.LT608236.1                                  70772394 14 +  92629107 t-a--t--att--a--t---a-----t-a-aaa
i Mus_caroli.LT608236.1                                 I 1 C 0
s Mus_musculus.chr16                                     75494449 12 +  98207768 t-a--t--att--a--t---a-----t-a-a--
i Mus_musculus.chr16                                    I 1 I 1
s Mus_pahari.LT608305.1                                  67561202 14 +  89017189 t-a--t--att--a--t---a-----t-a-aaa
i Mus_pahari.LT608305.1                                 I 1 C 0
s Mus_spretus.CM004110.1                                 74337172 12 +  97876770 t-a--t--att--a--t---a-----a-a-a--
i Mus_spretus.CM004110.1                                I 1 I 1
s Muscardinus_avellanarius.MusAve_scaffold_9643             15411 13 +     98495 t-t--T--ATA--A--T---A-----T-A-A-A
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4429196 16 -  28371801 ttt--t--atgaaa--t---t-----c-a-a-c
i Mustela_putorius.JH417978.1                           C 0 I 840
s Myocastor_coypus.MyoCoy_scaffold_3653                     96179 10 -    117718 -------------A--TAATA-----A-A-A-C
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 3 C 0
s Myotis_brandtii.KE161952.1                               971815 11 +   8389877 -----T--ATG--A--T---T-----C-A-A-C
i Myotis_brandtii.KE161952.1                            C 0 I 885
s Myotis_davidii.KB114863.1                               5023229 11 +   6462685 -----T--ATG--A--T---T-----C-A-A-C
i Myotis_davidii.KB114863.1                             C 0 I 562
s Myotis_lucifugus.GL429887.1                             3469321 11 -   3747815 -----T--ATG--A--T---T-----C-A-A-C
i Myotis_lucifugus.GL429887.1                           C 0 I 884
s Myotis_myotis.MyoMyo_scaffold_6123                        14554 11 +     66751 -----T--ATG--A--T---T-----C-A-A-C
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 I 884
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             8193 13 -      8794 T-T--T--ATG--T--T---T-----C-A-G-C
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4490854 14 -  14209539 ttt--t--atg--a--t---t-----c-a-a-c
i Neomonachus_schauinslandi.NINY01007774.1              C 0 I 819
s Neophocaena_asiaeorientalis.KZ688543.1                  3955337 13 -   4490290 T-T--T--ATG--T--T---T-----C-A-A-C
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 I 862
s Nomascus_annamensis.k141_762468                             782 13 -      2755 t-T--C--ATT--T--T---T-----C-A-A-A
i Nomascus_annamensis.k141_762468                       C 0 C 0
s Nomascus_concolor.k141_256540                              7394 13 -      8966 t-T--C--ATT--T--T---T-----C-A-A-A
i Nomascus_concolor.k141_256540                         C 0 C 0
s Nomascus_gabriellae.k141_1400361                           1333 13 -      2203 t-T--C--ATT--T--T---T-----C-A-A-A
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_453                             6645 13 +     12787 t-T--C--ATT--T--T---T-----C-A-A-A
i Nomascus_siki_b.tarseq_453                        C 0 C 0
s Nomascus_siki_a.k141_421408                                  1247 13 +     16235 t-T--C--ATT--T--T---T-----C-A-A-A
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                38578 14 +   3668941 ttt--t--atg--a--t---t-----G-A-A-C
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 I 840
s Nycticebus_bengalensis.LG16                            65572457 13 -  95554990 T-T--T--ATA--A--T---T-----C-A-A-A
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_771591                            15867 13 +     16181 T-T--T--ATA--A--T---T-----C-A-A-A
i Nycticebus_coucang.k141_771591                        I 5 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65680645 13 +  89412551 T-T--T--ATA--A--T---T-----C-A-A-A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            5000633 13 -  23139505 t-t--t--aaa--a--t---t-----c-a-a-a
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3691519  7 +  10294119 -------------G--T---A-----A-A-A-C
i Octodon_degus.JH651621.1                              I 3 C 0
s Odobenus_rosmarus.KB229369.1                             685558 14 -   3126709 ttt--t--atg--a--t---t-----c-a-a-c
i Odobenus_rosmarus.KB229369.1                          C 0 I 816
s Ondatra_zibethicus.OndZib_scaffold_6821                  130931  5 +    145789 --------------------A-----T-A-A-C
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1084192  2 +   1425656 -------------t--t----------------
i Odocoileus_virginianus.KZ101650.1                     C 0 I 1205
s Okapia_johnstoni.LVCL01S0017931.1                         42261  2 +     78940 -------------t--t----------------
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 I 1201
s Onychomys_torridus.OnyTor_scaffold_12578                  43817 13 +     62360 T-A--T--AAT--A--T---A-----T-G-A-A
i Onychomys_torridus.OnyTor_scaffold_12578              I 1 C 0
s Orcinus_orca.KB316965.1                                 7229011 13 -   7562323 t-t--t--atg--t--T---T-----C-A-A-C
i Orcinus_orca.KB316965.1                               C 0 I 869
s Orycteropus_afer.OryAfe_flattened_line_13509              64725 12 -     66828 t-t--t--atG--A--T---T-----C-C-A--
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141884596 11 + 163896628 -----t--ata--a--t---T-----C-A-A-A
i Oryctolagus_cuniculus.CM000803.1                      I 1 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      315716 14 -    505867 ttt--t--atg--a--t---t-----g-a-a-C
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 I 840
s Otolemur_crassicaudatus.k141_505435                        5693 13 -     53940 T-T--T--ATA--A--T---T-----C-G-A-A
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18013662 13 -  38779656 T-T--T--ATA--A--T---T-----C-G-A-A
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134083199  2 - 275406953 -------------t--t----------------
i Ovis_aries.CM001582.2                                 C 0 I 1455
s Ovis_canadensis.OviCan_scaffold_6251                      84433  2 +    140051 -------------T--T----------------
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 I 1459
s Pan_paniscus.CM003386.1                               127579069 13 - 205426864 t-t--c--att--a--t---t-----c-a-a-A
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120156229 13 - 196562556 t-t--c--att--a--t---t-----c-a-a-A
i Pan_troglodytes.CM009241.2                            C 0 I 41
s Panthera_onca.PanOnc_flattened_line_1615                  40452 14 +    295523 CTT--T--ACG--A--T---T-----C-A-A-C
i Panthera_onca.PanOnc_flattened_line_1615              C 0 I 861
s Panthera_pardus.KV860323.1                              3644267 14 +  18214204 CTT--T--ACA--A--T---T-----C-A-A-C
i Panthera_pardus.KV860323.1                            C 0 I 862
s Panthera_tigris.KE721879.1                              5033915 14 -   6340057 CTT--T--ACA--A--T---T-----C-A-A-C
i Panthera_tigris.KE721879.1                            C 0 I 855
s Pantholops_hodgsonii.KE114631.1                         1072070  2 -   1292953 -------------t--t----------------
i Pantholops_hodgsonii.KE114631.1                       C 0 I 1454
s Papio_anubis.CM001492.2                               188160956 13 - 188283584 t-t--c--att--a--t---t-----g-a-a-a
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              4046 13 +     25005 t-T--C--ATT--A--T---T-----G-A-A-A
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47518328 13 +  47705337 t-T--C--ATT--A--T---T-----G-A-A-A
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 72319 13 -    104429 t-T--C--ATT--A--T---T-----G-A-A-A
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   10851 13 +     14967 t-T--C--ATT--A--T---T-----G-A-A-A
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 6716 13 -      7628 t-T--C--ATT--A--T---T-----G-A-A-A
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    121934 14 -    135482 TTT--T--ATG--A--T---T-----C-A-A-C
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 I 849
s Perodicticus_ibeanus.k141_117958                          11357 13 -     23713 T-T--C--ATA--A--T---T-----C-A-A-A
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           12508 13 +     61070 T-T--C--ATA--A--T---T-----C-A-A-A
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       2824 15 +     49596 T-T--CAGATA--A--T---A-----C-A-A-A
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4955986 13 -   8017169 T-A--T--AAT--A--T---A-----T-G-A-A
i Peromyscus_maniculatus.KI615518.1                     I 1 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    17521 10 -     36578 -------------A--TAATA-----A-A-A-C
i Petromus_typicus.PetTyp_scaffold_33007                I 3 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              3478 13 +      8220 T-T--T--ATG--T--T---T-----C-A-A-C
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 I 862
s Pipistrellus_pipistrellus.PipPip_scaffold_3306           100099 11 +    112873 -----T--ATG--A--T---T-----C-A-A-C
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 I 883
s Platanista_gangetica.PlaMin_flattened_line_72990           9955 13 +     21690 T-T--T--ATG--T--T---T-----C-A-A-C
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 I 867
s Plecturocebus_bernhardi.k141_959214                       26650 13 +     44506 T-T--C--ATT--A--T---T-----C-A-A-A
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        26863 13 +     67491 T-T--C--ATT--A--T---T-----C-A-A-A
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      17102 13 -     98129 T-T--C--ATT--A--T---T-----C-A-A-A
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     26703 13 +    147771 T-T--C--ATT--A--T---T-----C-A-A-A
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         3338 13 -     43940 T-T--C--ATT--A--T---T-----C-A-A-A
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          7421 13 -     55515 T-T--C--ATT--A--T---T-----C-A-A-A
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         26775 13 +    152463 T-T--C--ATT--A--T---T-----C-A-A-A
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       4583 13 -    119457 T-T--C--ATT--A--T---T-----C-A-A-A
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         16497 13 +    134592 T-T--C--ATT--A--T---T-----C-A-A-A
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          27085 13 -     75465 T-T--C--ATT--A--T---T-----C-A-A-A
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              191700 13 -    373494 t-t--c--att--a--t---t-----c-a-A-A
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19812347 13 +  19899266 t-T--C--ATT--A--T---T-----C-A-A-A
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                4508 12 -      9567 T-T--T--ATG--A--T---C-----C-C-A--
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6853326  7 +  12164890 t-t--t--ata--a-------------------
i Prolemur_simus.MPIZ01000048.1                         C 0 I 3
s Propithecus_coquerelli.NW_012147863.1                     22133 13 -     30946 N-N--N--NNN--N--N---N-----N-N-N-N
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         8411 13 +     11805 T-C--T--ATA--A--T---T-----C-A-A-A
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           47745 13 +     52369 T-C--T--ATA--A--T---T-----C-A-A-A
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         40132 13 -     44753 T-C--T--ATA--A--T---T-----C-A-A-A
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            22055 13 +     27322 T-C--T--ATA--A--T---T-----C-A-A-A
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       21704 13 -     53241 T-C--T--ATA--A--T---T-----C-A-A-A
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         43967 13 -     48185 T-C--T--ATA--A--T---T-----C-A-A-A
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           39552 13 +     77221 --A--T--ATT--A--C---A-----T-A-AAA
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        250843 14 -    344369 TTT--T--ATG--A--T---T-----C-A-A-C
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 I 838
s Puma_concolor.QAVW01000427.1                          131540564 14 - 161321710 CTT--T--ACT--A--T---t-----c-a-a-c
i Puma_concolor.QAVW01000427.1                          C 0 I 684
s Rangifer_tarandus.RanTarSib_scaffold_24239                21057  2 +     68503 -------------T--T----------------
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 I 1184
s Rattus_norvegicus.chr11                                13918211 14 +  90463843 t-a--t--att--a--t---a-----t-a-aaa
i Rattus_norvegicus.chr11                               I 1 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                      1466  2 -      4338 -------------T--T----------------
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 I 1456
s Saimiri_boliviensis.NW_024100938.1                     15677107 13 -  43202129 t-t--c--att--a--t---t-----c-a-c-A
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        9020 13 +     34089 T-T--C--ATT--A--T---T-----C-A-C-A
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              8960 13 -     60842 T-T--C--ATT--A--T---T-----C-A-C-A
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              9054 13 +     67014 T-T--C--ATT--A--T---T-----C-A-C-A
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              9031 13 +     60816 T-T--C--ATT--A--T---T-----C-A-C-A
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 8968 13 -     76454 T-T--C--ATT--A--T---T-----C-A-C-A
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17345753 13 -  30362882 t-T--C--ATT--A--T---T-----C-A-A-A
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         25074 13 -     62485 t-T--C--ATT--A--T---T-----C-A-A-A
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   40109 13 -    114521 T-T--T--ACG--G--T---T-----C-A-A-C
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 I 872
s Sigmodon_hispidus.SigHis_scaffold_11332                  105989  6 -    120886 ----------------T---A-----T-A-A-A
i Sigmodon_hispidus.SigHis_scaffold_11332               I 3 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            24090 13 +    739146 T-T--T--GTG--A--T---T-----C-A-G-C
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 I 1528
s Sorex_araneus.JH798170.1                               17774320 14 -  27805282 ---------TG--A--T---TTTGTGC-A-T-A
i Sorex_araneus.JH798170.1                              I 2 I 1436
s Spermophilus_dauricus.KZ294190.1                        2244607 13 +   2842873 t-t--t--ata--a--t---a-----c-a-a-a
i Spermophilus_dauricus.KZ294190.1                      I 1 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             239633 14 -    276980 TTT--T--ATG--A--T---T-----T-A-A-C
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 I 822
s Suricata_suricatta.SurSur_flattened_line_20339            33747 14 +     62062 ATT--T--TTG--A--T---T-----C-A-A-C
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 I 903
s Sus_scrofa.CM000824.4                                 189275502 13 + 218635234 T-T--T--ATG--T--T---T-----C-A-A-C
i Sus_scrofa.CM000824.4                                 I 1 I 1162
s Symphalangus_syndactylus.tarseq_24                        19370 13 -  13920577 T-T--T--ATT--T--T---T-----C-A-A-A
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                2878 11 +     20549 -----T--ATG--A--T---T-----C-A-A-C
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 I 893
s Tamandua_tetradactyla.TamTet_scaffold_26877               17866 13 +     45698 T-T--T--ATG--T--T---T-----C-A-G-C
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      811348 14 +   1148477 TTT--T--ATG--A--T---T-----C-A-A-C
i Tapirus_indicus.TapInd_scaffold_176                   C 0 I 886
s Tapirus_terrestris.TapTer_scaffold_14939                  61990 14 +     99546 TTT--T--ATG--A--T---T-----C-A-A-C
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 I 887
s Theropithecus_gelada.CM009951.1                       194012489 13 - 194193292 t-t--c--att--a--t---t-----g-a-a-a
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                  1033 12 -      3104 -----T--ATG--AA-G---T-----T-T-G-C
i Tolypeutes_matacus.TolMat_scaffold_475685             C 0 C 0
s Trichechus_manatus.JH594618.1                          16090398 12 +  31416278 T-A--T--ATG--A--T---T-----C-C-A--
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2801672 11 -   3938065 -----T--ATG--A--T---T-----T-G-A-A
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                   10495 11 +     13056 -----T--ATG--A--T---T-----T-G-A-A
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69317741 13 -  96451834 t-t--t--atg--t--T---T-----C-A-A-C
i Tursiops_truncatus.MRVK01000923.1                     C 0 I 869
s Uropsilus_gracilis.UroGra_scaffold_4115                     580  6 +    136657 T-G--T--ATG----------------------
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 I 796
s Ursus_maritimus.KK498671.1                              6521266 14 +  28682327 ttt--t--atg--a--t---t-----c-a-A-C
i Ursus_maritimus.KK498671.1                            C 0 I 838
s Varecia_rubra.k141_432109                                  9969 13 -     20643 T-T--T--ATA--A--T---T-----C-A-A-A
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             29504 13 -     33872 T-T--T--ATA--A--T---T-----C-A-A-A
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1528781 13 -   2331223 T-T--T--ATA--T--T---T-----C-A-A-C
i Vicugna_pacos.KN269600.1                              C 0 I 852
s Vulpes_lagopus.VulLag_flattened_line_2045                144943 14 -    281493 TTT--T--ATG--A--T---T-----G-A-A-T
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 I 840
s Xerus_inauris.XerIna_scaffold_7898                       132102 13 -    134049 T-G--T--GTG--A--T---G-----C-A-A-A
i Xerus_inauris.XerIna_scaffold_7898                    I 1 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        220415 14 -    227762 TTT--T--ATG--A--T---T-----C-A-A-C
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 I 819
s Zapus_hudsonius.ZapHud_scaffold_202118                     1592  4 -      3360 T-C--T--A------------------------
i Zapus_hudsonius.ZapHud_scaffold_202118                C 0 I 2
s Ziphius_cavirostris.ZipCav_flattened_line_60625            2480 13 -     13665 T-T--T--ATG--T--T---T-----C-A-A-C
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 I 715
e Macroglossus_sobrinus.MacSob_scaffold_879                702508 802 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Tragulus_javanicus.TraJav_scaffold_14717                   9488 743 +     90398 I
e Tonatia_saurophila.TonSau_scaffold_3334                  138634 910 -    259118 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                20853 881 +    109198 I
e Rhinolophus_sinicus.LVEH01000179.1                      1793130 1032 +   2252614 I
e Pteropus_vampyrus.KN525959.1                             605469 863 -   3946241 I
e Pteropus_alecto.KB031157.1                             13247519 869 -  17261082 I
e Pteronotus_parnellii.KE867983.1                            6623 911 -     27784 I
e Noctilio_leporinus.NocLep_scaffold_12062                  51065 1131 +     94413 I
e Mormoops_blainvillei.MorMeg_scaffold_2952                163987 895 +    265003 I
e Micronycteris_hirsuta.MicHir_scaffold_37978               25464 902 -     32043 I
e Megaderma_lyra.MegLyr_scaffold_3562                       66105 943 -    234502 I
e Hipposideros_galeritus.HipGal_scaffold_7653                6123 1471 +     86108 I
e Hipposideros_armiger.JXIK01001085.1                      283559 1549 -    477199 I
e Eidolon_helvum.KE772537.1                                 13798 832 +     24177 I
e Desmodus_rotundus.KZ672188.1                           18701716 1050 -  18957592 I
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         3027 905 -      5782 I
e Carollia_perspicillata.CarPer_scaffold_4436               62503 910 +     67245 I
e Artibeus_jamaicensis.ArtJam_scaffold_41619                11489 929 -     29036 I
e Anoura_caudifer.AnoCau_scaffold_422                      393081 1052 -    631301 I
e Trachypithecus_pileatus.k141_532233                       30126  0 -     40754 I
e Trachypithecus_phayrei.ctg364                            232455  0 -   1198723 I
e Trachypithecus_obscurus.k141_411399                         131  0 +     12010 I
e Trachypithecus_melamera.k141_950981                        2232  0 -      3512 I
e Trachypithecus_leucocephalus.k141_352489                   1214  0 +      9423 I
e Trachypithecus_laotum.k141_897381                         45646  0 -     53586 I
e Trachypithecus_hatinhensis.k141_641377                     1240  0 +      1365 I
e Trachypithecus_germaini.k141_240878                        5067  3 -     24955 I
e Trachypithecus_geei.k141_137495                           30106  0 -     42322 I
e Trachypithecus_francoisi.k141_1012484                       874  0 +      8809 I
e Trachypithecus_cristatus.k141_968903                      32589  3 +     43409 I
e Trachypithecus_crepusculus.k141_863597                     4944  0 -     23436 I
e Trachypithecus_auratus.k141_672638                         4947  3 +     38635 I
e Tarsius_wallacei.k141_48636                               64696  0 +     65473 C
e Tarsius_lariang.k141_609102                               31387  0 +     42269 C
e Semnopithecus_vetulus.k141_748269                          4706  0 +     17284 I
e Semnopithecus_schistaceus.k141_628310                     45652  0 -     53123 I
e Semnopithecus_priam.k141_368201                           10107  0 -     20692 I
e Semnopithecus_johnii.k141_1300894                          1368  0 +     13764 I
e Semnopithecus_hypoleucos.k141_2141024                      1351  0 -      8815 I
e Semnopithecus_entellus.k141_1743075                       45578  0 +     45790 I
e Rhinopithecus_strykeri.ctg241                            462135  0 +   1472273 I
e Rhinopithecus_bieti.k119_554384                            2917  0 -     17045 C
e Pygathrix_nigripes_a.k141_758202                             3050  0 -      8240 I
e Pygathrix_nigripes_b.ctg25                                14340869  0 -  15297009 I
e Pygathrix_cinerea.k141_951151                              3033  0 -      8225 I
e Presbytis_mitrata.k141_1767317                            10996  0 +     15869 I
e Presbytis_comata.k141_678168                              11007  0 +     11126 I
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000342.1                3428480  0 -   4356645 I
e Piliocolobus_kirkii.k141_451083                            4879  0 -     13367 I
e Piliocolobus_gordonorum.k141_736355                       29715  0 +     67079 I
e Piliocolobus_badius.k141_512007                           29798  0 +     37672 I
e Nasalis_larvatus.k141_1382660                              4275  0 +      5784 I
e Nannospalax_galili.KL201303.1                            241776  0 -    362372 I
e Colobus_polykomos.k141_1178012                               88  3 -     11758 I
e Colobus_guereza.LG08                                   96946830  0 - 156195979 I
e Colobus_angolensis.KN983490.1                            283936  0 +    886210 I
e Cephalopachus_bancanus.k141_702587                        12545  0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530  0 +    345090 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               18105 41 +    209709 A-T-GTAAATAG-A-AGCCAGTTGGTAATTC-CA-------AGATAA----TA--------GTAT
s Acinonyx_jubatus.LLWD01000356.1                         2040907 41 +   3721120 A-T-CTAAATAG-A-AGCCAGCTGTCAATTG-CA-------AGACAC----ta--------gtat
i Acinonyx_jubatus.LLWD01000356.1                       I 855 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    118401 41 -    189883 A-T-CTGCATAG-A-TGTAAACTTTCAACTA-TA-------AGACAA----TA--------GTAT
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10664850 41 +  23371972 A-T-TTAAATAG-A-AGCCAGCTGGCAATTG-TA-------AGACAT----TA--------GTAT
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 838 C 0
s Ailurus_fulgens.LNAC01000003.1                          7101804 41 -  16596857 A-T-CTAAATAG-A-AGCCAGTCAGCAATTG-TA-------AGACat----ta--------gtat
i Ailurus_fulgens.LNAC01000003.1                        I 1266 C 0
s Allactaga_bullata.AllBul_scaffold_141108                   1790 41 -      7259 A-T-CTACATAG-A-CACAAGCTGGAAATTC-TA-------AGGTAT----TG--------GCGT
i Allactaga_bullata.AllBul_scaffold_141108              C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   5979 41 -     60446 A-T-CTAAATAG-A-AGGCAGTTGGTAATTC-CA-------AGATAG----TA--------GTAT
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         6695 41 -     29318 A-T-CTAAATAG-A-AGGCAGTGGGTAATTC-CA-------AGATAG----TA--------GTAT
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         5633 41 +     38766 A-T-CTAAATAG-A-AGGCAGTGGGTAATTC-CA-------AGATAG----TA--------GTAT
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          6589 41 -     80423 A-T-CTAAATAG-A-AGGCAGTGGGTAATTC-CA-------AGATAG----TA--------GTAT
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              1573 41 +     19852 A-T-CTAAATAG-A-AGCCAGTTGGTAATTC-CA-------AGACAG----TA--------GTAT
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                3817 41 -     12443 A-T-CTAAATAG-A-AGCCAGTTGGTAATTC-CA-------AGACAG----TA--------GTAT
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                             1116 41 +      5070 A-T-CTAAATAG-A-AGCCAGTTGGTAATTC-CA-------AGACAG----TA--------GTAT
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                  861 41 -      1641 A-T-CTAAATAG-A-AGCCAGTTGGTAATTC-CA-------AGACAG----TA--------GTAT
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          3600 41 -     24210 A-T-CTAAATAG-A-AGCCAGTTGGTAATTC-CA-------AGACAG----TA--------GTAT
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_494922                              104 41 -      8325 A-T-CTAAATAG-A-AGCCAGTTGGTAATTC-CA-------AGACAG----TA--------GTAT
i Alouatta_nigerrima.k141_494922                        N 0 C 0
s Alouatta_palliata.k141_405616                              6018 41 +     16794 A-T-CTAAATAG-A-AGCCAGTTGGTAATTC-CA-------AGACAG----TA--------GTAT
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                            1150 41 -      1470 A-T-CTAAATAG-A-AGCCAGTTGGTAATTC-CA-------AGACAG----TA--------GTAT
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             5295 41 -      9835 A-T-CTAAATAG-A-AGCCAGTTGGTAATTC-CA-------AGACAG----TA--------GTAT
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3528047 41 +   4113121 A-C-CTAAATAG-A-AGCCAGTTGGCAATTT-TA-------AGACAT----TA--------GTAT
i Ammotragus_lervia.NIVO01013474.1                      I 1981 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      394133 45 -    631301 A-T-CTAAATGG-A-ACCCAGGTGGCAATTG-CA-------AGATATTAATTA--------GTAA
i Anoura_caudifer.AnoCau_scaffold_422                   I 1052 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             5208 41 +     55446 A-T-CTAAATAG-A-AGCCAGTTGGTAATTT-TA-------AGACAT----TA--------GTAT
i Antilocapra_americana.AntAmePen_scaffold_27338        I 1710 C 0
s Aotus_azarae.k141_3170768                                 66905 34 +     78111 A-T-CTGAATAG-A-AG-------GTAATTC-CA-------AGACAG----TA--------GCAT
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            9853 34 +     22701 A-T-CTGAATAG-A-A-------GGTAATTC-CA-------AGACAG----TA--------GCAT
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5753809 41 +   9889416 A-T-CTGAATAG-A-AGCCAGTTGGTAATTC-CA-------AGACAG----TA--------GCAT
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                            10408 41 -    104377 A-T-CTGAATAG-A-AGCCAGTTGGTAATTC-CA-------AGACAG----TA--------GCAT
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                              10415 41 +     23246 A-T-CTGAATAG-A-AGCCAGTTGGTAATTC-CA-------AGACAG----TA--------GCAT
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     3075 41 +     11424 A-T-CTAAATAG-A-CCCAAGCTGACAATTC-CA-------AGACAT----GG--------GTAT
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        6998 32 +      9265 -----TAAATAG-G-TGGCAGCTAGCAATTC-CA-------AAATAT------------------
i Arctocebus_calabarensis.k141_587554                   I 1 I 3
s Artibeus_jamaicensis.ArtJam_scaffold_41619                12418 45 -     29036 A-T-CTAAATGG-A-AGCTAGGTGGCAATTG-CA-------AGATATCAATTA--------GTAA
i Artibeus_jamaicensis.ArtJam_scaffold_41619            I 929 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9543702 41 +  39197703 A-T-CTAAATAG-A-AGCCAGTTGGTAATTC-CA-------AGACAG----TA--------GTAT
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             64976 41 +     85812 A-T-CTAAATAG-A-AGCCAGTTGGTAATTC-CA-------AGACAG----TA--------GTAT
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                15989 41 +     89302 A-T-CTAAATAG-A-AGCCAGTTGGTAATTC-CA-------AGACAG----TA--------GTAT
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             20490 41 -     58268 A-T-CTAAATAG-A-AGCCAGTTGGTAATTC-CA-------AGACAG----TA--------GTAT
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             68484 41 +    119057 A-T-CTAAATAG-A-AGCCAGTTGGTAATTC-CA-------AGACAG----TA--------GTAT
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              10453 41 -     25888 A-T-CTAAATAG-A-AGCCAGTTGGTAATTC-CA-------AGACAG----TA--------GTAT
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                11516 40 -     16375 A-T-C-AAATAG-A-TATCAGCTGGTAATTC-CA-------AGATAT----TA--------ATAT
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               5132 40 +      6337 A-T-C-AAATAG-A-TATCAGCTGGTAATTC-CA-------AGATAT----TA--------ATAT
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26385431 38 +  51448160 a-T-CTAAATAG-A-AGCCAGCTGGCAATTG-CA-------AGAC-------A--------GTAT
i Balaenoptera_acutorostrata.KI537095.1                 I 868 C 0
s Balaenoptera_bonaerensis.DF502048.1                       10604 38 -     13118 a-T-CTAAATAG-A-AGCTAGCTGGCAATTG-CA-------AGAC-------A--------GTAT
i Balaenoptera_bonaerensis.DF502048.1                   I 868 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   50016 41 -     72089 A-T-CTAAATAG-A-AGCCAGCTGGCAGTTT-TA-------AGACAT----TA--------GTAT
i Beatragus_hunteri.BeaHun_scaffold_21644               I 1486 C 0
s Bison_bison.KN264915.1                                   304966 41 -   6870073 A-T-CTAAATAG-A-AGCCACTTGGCAATTT-TA-------AGACAT----TA--------GTAT
i Bison_bison.KN264915.1                                I 2297 C 0
s Bos_indicus.CM003021.1                                 22959071 41 + 161108492 A-T-CTAAATAG-A-AGCCACTTGGCAATTT-TA-------AGACAT----TA--------GTAT
i Bos_indicus.CM003021.1                                I 2304 C 0
s Bos_mutus.JH883513.1                                     421251 41 +    998990 A-T-CTAAATAG-A-AGCCAGTTGGCAATTT-TA-------AGACAT----TA--------GTAT
i Bos_mutus.JH883513.1                                  I 2243 C 0
s Bos_taurus.CM000177.6                                  22667723 41 + 158972876 A-T-CTAAATAG-A-AGCCACTTGGCAATTT-TA-------AGACAT----TA--------GTAT
i Bos_taurus.CM000177.6                                 I 2302 C 0
s Bubalus_bubalis.KI419065.1                               676562 41 +   1914593 a-T-CTAACTAG-A-AGCCAGGTGGCAATTT-TA-------AGACAT----TA--------GTAT
i Bubalus_bubalis.KI419065.1                            I 1204 C 0
s Cacajao_ayresi.k141_724503                               118351 41 -    171031 A-T-CTAAATAG-A-AGCCAGTTGGTAATTC-CA-------AGACAG----TA--------GTAT
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 17371 41 +    125063 A-T-CTAAATAG-A-AGCCAGTTGGTAATTC-CA-------AGACAG----TA--------GTAT
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                19418 41 -    216513 A-T-CTAAATAG-A-AGCCAGTTGGTAATTC-CA-------AGACAG----TA--------GTAT
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       11961 41 -    134917 A-T-CTAAATAG-A-AGCCAGTTGGTAATTC-CA-------AGACAG----TA--------GTAT
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3224538 40 -   8989139 A-A-CTAAACAG-A-AGCTGGCTGGCAATTG-CA-------AGACa-----ca--------gtat
i Camelus_bactrianus.KN276303.1                         I 852 C 0
s Camelus_dromedarius.KN271192.1                           402238 40 -  15254737 A-A-CTAAACAG-A-AGCTGGCTGGCAATTG-CA-------AGACa-----ca--------gtat
i Camelus_dromedarius.KN271192.1                        I 851 C 0
s Camelus_ferus.KB016973.1                                2977976 40 +   6889770 a-A-CTAAACAG-A-AGCTGGCTGGCAATTG-CA-------AGACa-----ca--------gtat
i Camelus_ferus.KB016973.1                              I 852 C 0
s CanFam4.chr31                                          11527713 41 +  39901454 a-t-cTGAATAG-A-AACCATTTGGCAACTG-TA-------AAACAT----TA--------GTAT
i CanFam4.chr31                                         I 836 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   22687 41 +     87036 a-t-cTGAATAG-A-AACCATTTGGCAACTG-TA-------AAACAT----TA--------GTAT
i Canis_lupus_VD.CanFam_VD_scaffold_16982               I 836 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11274396 41 -  35597290 a-t-cTGAATAG-A-AACCATTTGGCAACTG-TA-------AAACAT----ta--------gtat
i Canis_lupus_dingo.QKWQ01001993.1                      I 836 I 214
s Canis_lupus_familiaris.chr31                           11097107 41 +  39895921 a-t-cTGAATAG-A-AACCATTTGGCAACTG-TA-------AAACAT----ta--------gtat
i Canis_lupus_familiaris.chr31                          I 836 C 0
s Canis_lupus_orion.HG994411.1                           16463892 41 -  44759192 a-t-cTGAATAG-A-AACCATTTGGCAACTG-TA-------AAACAT----ta--------gtat
i Canis_lupus_orion.HG994411.1                          I 836 C 0
s Capra_aegagrus.CM003214.1                              21335480 41 + 157394656 A-T-CTAAACAG-A-AGCCAGTTGGCAATTT-TA-------AGACAT----TA--------ATAT
i Capra_aegagrus.CM003214.1                             I 1470 C 0
s Capra_hircus.CM004562.1                               135713833 41 - 157403528 A-T-CTAAACAG-A-AGCCAGTTGGCAATTT-TA-------AGACAT----TA--------ATAT
i Capra_hircus.CM004562.1                               I 1468 C 0
s Capromys_pilorides.CapPil_scaffold_780116                    86 41 +      1571 A-T-CAAAATAA-G-CTCAATCTGGCAATTT-AA-------AGACAC----TG--------GCAT
i Capromys_pilorides.CapPil_scaffold_780116             C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               63413 44 +     67245 A-T-CTAAGTGG-A-AGCCA-ATGAAAATTG-CA-------AGATATTAATTA--------GTAA
i Carollia_perspicillata.CarPer_scaffold_4436           I 910 C 0
s Castor_canadensis.CasCan_scaffold_1326                      534 40 -    202837 A-T-CTAAATTG-A-CACA-GCTGTCAATTA-GA-------AGACAT----TG--------GTAT
i Castor_canadensis.CasCan_scaffold_1326                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   164301 19 -    276539 --------------------------AATTA-CA-------AGACAT----TA--------GTAT
i Catagonus_wagneri.CatWag_scaffold_1305                I 1111 C 0
s Cavia_aperea.AVPZ01000278.1                            15790222 41 -  24422027 A-T-CGGAACAG-A-CACAAGATGGTAATTT-AA-------AGACAC----TG--------gcat
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15802161 41 -  24440124 A-T-CGGAACAG-A-CACAAGATGGTAATTT-AA-------AGACAC----Tg--------gcat
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       180333 41 +    436027 A-T-CGGAACAG-A-CACAAGATGGTAATTT-AA-------AGACAC----TG--------GCAT
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18896078 41 -  29618158 A-T-CTAAATAG-G-AGCCAGTTGGTAATTC-CA-------AGACAG----TA--------GTAT
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                12728 41 -     26817 A-T-CTAAATAG-G-AGCCAGTTGGTAATTC-CA-------AGACAG----TA--------GTAT
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                16972 41 +     25043 A-T-CTAAATAG-G-AGCCAGTTGGTAATTC-CA-------AGACAG----TA--------GTAT
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4369507 41 +   7569818 a-t-CTAAATAA-A-AACCAGCTGGCAACTG-CA-------AGACAT----TA--------Gtat
i Ceratotherium_simum.JH767818.1                        I 1126 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         9264 41 -      9338 A-T-CTAAATAA-A-AACCAGCTGGCAACTG-CA-------AGACAT----TA--------GTAT
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    I 1126 C 0
s Cercocebus_atys.KQ010443.1                              6559919 41 +   6739814 a-t-ttaaatag-a-agGCAGTTGGTAATTC-CA-------AGATAG----TA--------GTAT
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      31396 41 +     60454 A-T-TTAAATAG-A-AGGCAGTTGGTAATTC-CA-------AGATAG----TA--------GTAT
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          6600 41 -     21101 A-T-TTAAATAG-A-AGGCAGTTGGTAATTC-CA-------AGATAG----TA--------GTAT
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         63910 41 -    107033 A-T-TTAAATAG-A-AGGCAGTTGGTAATTC-CA-------AGATAG----TA--------GTAT
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        6773 41 -     17608 A-T-CTAAATAG-A-AGGCAGTGGGTAATTC-CA-------AGATAG----TA--------GTAT
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          3938 41 +     45019 A-T-CTAAATAG-A-AGGCAGCGGGTAATTC-CA-------AGATAG----TA--------GTAT
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           4214 41 +     15177 A-T-CTAAATAG-A-AGGCAGTGGGTAATTC-CA-------AGATAG----TA--------GTAT
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          6820 41 +     16677 A-T-CTAAATAG-A-AGGCAGTGGGTAATTC-CA-------AGATAG----TA--------GTAT
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           29010 41 +     35983 A-T-CTAAATAG-A-AGGCAGTGGGTAATTC-CA-------AGATAG----TA--------GTAT
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11995541 41 +  12117833 A-T-CTAAATAG-A-AGGCAGTGGGTAATTC-CA-------AGATAG----TA--------GTAT
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46482517 41 +  46592721 A-T-CTAAATAG-A-AGGCAGTGGGTAATTC-CA-------AGATAG----TA--------GTAT
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                        634 41 -     27215 A-T-CTAAATAG-A-AGGCAGCGGGTAATTC-CA-------AGATAG----TA--------GTAT
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       6834 41 +     35577 A-T-CTAAATAG-A-AGGCAGTGGGTAATTC-CA-------AGATAG----TA--------GTAT
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        6628 41 -     25661 A-T-CTAAATAG-A-AGGCAGTGGGTAATTC-CA-------AGATAG----TA--------GTAT
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        6800 41 -     17744 A-T-CTAAATAG-A-AGGCAGTGGGTAATTC-CA-------AGATAG----TA--------GTAT
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        26169 41 +     37128 A-T-CTAAATAG-A-AGGCAGTGGGTAATTC-CA-------AGATAG----TA--------GTAT
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           5199 48 -      6963 A-T-CTAAATAG-A-AGCCAGCTGGCAA-TC-AA-------AGACAT----CAAGACATCGATGT
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           63725 41 -     68416 A-T-CTAAATAG-A-TATCATCTGGCAATTC-CA-------AGATAT----TA--------GTAT
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                           12845 41 +     13308 A-T-CTAAATAG-A-TATCATCTGGAAATTC-CA-------AGATAT----TA--------GTAT
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                            10014 41 -     18223 A-T-ATAAATAG-A-AGCCAATTGGTAATTC-CA-------AGACAG----TA--------GTAT
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              1752 41 +    188999 A-T-ATAAATAG-A-AGCCAATTGGTAATTC-CA-------AGACAG----TA--------GTAT
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           46051 41 +     57117 A-T-ATAAATAG-A-AGCCAATTGGTAATTC-CA-------AGACAG----TA--------GTAT
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          50731 41 +     54541 A-T-ATAAATAG-A-AGCCAATTGGTAATTC-CA-------AGACAG----TA--------GTAT
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15964922 41 +  43084221 a-c-ctaAGTAG-A-CACAAGTTGGCAATTT-AA-------AGACAT----Tg--------gaat
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         75532 41 +    196370 A-T-CTAAATAG-A-AGCCAGTTGGTAATTC-CA-------AGACAG----TA--------GTAT
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          19713 41 +     40510 A-T-CTAAATAG-A-AGCCAGTTGGTAATTC-CA-------AGACAG----TA--------GTAT
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15144354 41 -  15256731 A-T-CTAAATAG-A-AGGCAGTGGGTAATTC-CA-------AGATAG----TA--------GTAT
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      38818 41 -     53260 A-T-CTAAATAG-A-AGGCAGTGGGTAATTC-CA-------AGATAG----TA--------GTAT
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101149377 41 + 101219884 A-T-CTAAATAG-A-AGGCAGTGGGTAATTC-CA-------AGATAG----TA--------GTAT
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                19239 37 -     21363 A-T-CTAAATAG-A-AGCTAGCTGGCAATTC-CA-------AGACAT----TG------------
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           764543 37 +    964067 A-T-CTAAATAG-A-AGCTAGCTGGCAATTC-CA-------AGACAT----TG------------
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_954668              1460 41 -      1738 A-T-CTAAGGAA-A-TGCCAGCTGGCAACTT-CA-------AGACTT----GG--------TTAT
i Chrysochloris_asiatica.ChrAsi_scaffold_954668         C 0 C 0
s Condylura_cristata.JH655880.1                          60623560 18 +  78930452 A-A-TTTTCCAG-A-CATTACT-------------------------------------------
i Condylura_cristata.JH655880.1                         I 894 I 2
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         3932 41 -      5782 A-T-CTAAATAG-A-AGCCCGCAGGCAATTG-CA-------AGATAT----TA--------GTAA
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    I 905 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 283184 41 -    399297 A-T-CTGTATAG-A-CATAAACTTACAATTA-TA-------AGACAA----TG--------GTAC
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53035537 41 +  72327488 a-t-ctgCATAT-A-CACAAATTTGCAACTA-TA-------TGACAA----TG--------GTAT
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              3433 42 -     22648 G-T-CTAAGTAA-AAAATTACCTAAAAAATT-TA-------AAACAA----TA--------GTTT
i Crocidura_indochinensis.CroInd_scaffold_27484         I 797 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            58919 41 -     70449 A-T-CTAACTAG-A-AACCAGCTGGCAGTTG-CA-------AGACAT----TA--------GTAT
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 888 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  214807 41 -    956709 A-T-GTCAACAG-A-TACAAGCTGGCAATTT-CA-------AGACAT----GG--------GGAT
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 36472 41 -     67205 A-T-CTAAATAG-T-CACAAGCTGGCAATGT-AA-------AGACAT----TG--------GCAT
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                21410 41 +     26546 A-T-CTAAATAG-A-CACAAGTTGGCAATTT-AA-------AGACAC----TG--------GCAT
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             62549 42 -    236241 AGT-CTAAATAG-T-CACAAGATGGCAATTT-AA-------AGACAC----TG--------GCAT
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          186262 31 -   6883506 -----------G-A-AGCTAGGTGGCAA-TC-AA-------AGACAT----CA--------GCAT
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16849677 41 +  31942871 A-T-CTAAATAG-A-GGTCAGCTGGCAATTC-CA-------AGATAC----TA--------GTAT
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80042028 38 -  96802777 a-T-CTAAATAG-A-AGCCAGCTGGCAACTG-CA-------AGAC-------A--------GTAT
i Delphinapterus_leucas.KZ290064.1                      I 862 C 0
s Desmodus_rotundus.PEHR01015603.1                            312 45 +       472 A-T-CTAAATGG-A-AGCCAGCTGGCAATTG-CA-------AGATATTAATTA--------GTAA
i Desmodus_rotundus.PEHR01015603.1                      n 1050 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 327906 41 +    993696 a-t-CTAAATAA-A-AACCAGCTGGCCATTG-CA-------AGACAT----TA--------Gtat
i Dicerorhinus_sumatrensis.PEKH010003161.1              I 1123 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   8540 41 +    151128 A-T-CTAAATAA-A-AACCAGCTGGCAATTG-CA-------AGACAT----TA--------GTAT
i Diceros_bicornis.DicBicMic_scaffold_9545              I 1125 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   160393 42 +    228994 A-AGCTAAACAG-A-CACAGGCTGCCAATTT-AA-------ATACAT----CA--------GCAT
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3660843 41 +   4240102 A-T-CTAAATTG-A-CACAAGGTGCCAATTA-CA-------AGACAT----CA--------GTAG
i Dipodomys_ordii.KN672545.1                            I 1 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  3217 41 -     11986 A-T-CTAAATTG-A-CACAAGGTGCCAATTA-CA-------AGACAT----CA--------GTAG
i Dipodomys_stephensi.DipSte_scaffold_84338             I 1 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                41133 27 -     73477 ------------------AAGTTGGCAATGT-AA-------AGATAC----TA--------TCAT
i Dolichotis_patagonum.DolPat_scaffold_14102            I 8 C 0
s Echinops_telfairi.JH980316.1                           23000452 41 -  44670279 A-T-CTAAATAG-A-AGCCAGCTGGCAAATT-CA-------AGTCAT----TG--------GTAT
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 14630 41 +     24177 t-T-CTAAATCA-A-AGCTAGCTGGCAAATG-CA-------AGATAT----Ta--------gtaa
i Eidolon_helvum.KE772537.1                             I 832 I 6
s Elaphurus_davidianus.JRFZ01086400.1                     1497961 41 +   1727528 a-T-CTAAATAG-A-AGCCAGTTGGCAATTT-TA-------AGACAT----TA--------GTAT
i Elaphurus_davidianus.JRFZ01086400.1                   I 1214 C 0
s Elephantulus_edwardii.JH947210.1                        7834706 41 +  15467074 A-T-CTATGTAG-A-AGCTCACTGGCAACTT-CA-------AGACAT----TT--------TTAT
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        244350 41 -    369425 A-T-CTGTATAT-A-CATAATCTTGCATTTA-TA-------TAATAA----TG--------AAAT
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01076532.1                            681 41 +      9159 A-T-CTGTATAT-A-CATAATCTTTCATTTA-TA-------TGACAA----TG--------AAAT
i Ellobius_talpinus.LOJH01076532.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85878850 42 +  99434291 a-t-cTAAATAG-A-AGCCAGTTGGCAATTGTTA-------AGACat----ta--------gtat
i Enhydra_lutris.KZ291749.1                             I 849 C 0
s Eptesicus_fuscus.JH977687.1                             4710388 45 +   6522550 a-T-CTAAATAC-A-AACCAGCTGGCAATTG-TA-------AGATATTAATTA--------GTAA
i Eptesicus_fuscus.JH977687.1                           I 894 C 0
s Equus_asinus.JREZ01000062.1                             5857766 41 -   7175178 A-T-CTAAATAA-A-AGCAAGCTGGCAGTTG-CA-------AGACAT----TA--------Gtat
i Equus_asinus.JREZ01000062.1                           I 891 C 0
s Equus_caballus.CM000402.2                              13356252 41 +  41866177 A-T-CTAAATAA-A-AGCAAGCTGGCAGTTG-CA-------AGACAT----TA--------Gtat
i Equus_caballus.CM000402.2                             I 891 C 0
s Equus_przewalskii.ATBW01073585.1                          17742 41 +     92910 A-T-CTAAATAA-A-AGCAAGCTGGCAGTTG-CA-------AGACAT----TA--------Gtat
i Equus_przewalskii.ATBW01073585.1                      I 891 C 0
s Erinaceus_europaeus.JH835290.1                         11542926 41 +  16010500 G-T-CTAAATGG-A-AGTCATCTGTAAATTG-CA-------AAATAT----CA--------GTAT
i Erinaceus_europaeus.JH835290.1                        I 1124 C 0
s Erythrocebus_patas.Contig8                             48781387 41 -  48907691 A-T-CTAAATAG-A-AGGCAGTGGGTAATTC-CA-------AGATAG----TA--------GTAT
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          320275 38 +    330699 A-T-CTAAATAG-A-AGCCAGCTGGCAATTG-CA-------AGAC-------A--------GTAT
i Eschrichtius_robustus.EscRob_flattened_line_685       I 869 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             66731 38 +     89355 A-T-CTAAATAG-A-AGCCAGCTGGCAATTG-CA-------AGAC-------A--------GTAT
i Eubalaena_japonica.EubJap_flattened_line_7756         I 868 C 0
s Eulemur_albifrons.k141_59549                                913 41 +      1101 A-T-CTAAATAG-A-TATCAGCTGGTAATTC-CA-------AGATAT----TA--------GTAT
i Eulemur_albifrons.k141_59549                          I 116 n 41
s Eulemur_collaris.k141_1015201                              3080 41 -      4292 A-T-CTAAATAG-A-TATCAGCTGGTAATTC-CA-------AGATAT----TA--------GTAG
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            16217 41 +     36558 A-T-CCAAATAG-A-TATCAGCTGGCAATTC-CA-------AGATAT----TA--------GTAT
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            12539 41 +     60246 A-T-CCAAATAG-A-TATCAGCTGGTAATTC-CA-------AGATAT----TA--------GTAT
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                16024 41 +    109717 A-T-CTAAATAG-A-TATCAGCTGGTAATTC-CA-------AGATAT----TA--------GTAG
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 4007 41 -     19505 A-T-CCAAATAG-A-TATCAGCTGGTAATTC-CA-------AGATAT----TA--------GTAT
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                20682 41 +     27497 A-T-CTAAATAG-A-TATCAGCTGGTAATTC-CA-------AGATAT----TA--------GTAG
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           23138 41 +     26808 A-T-CTAAATAG-A-TATCAGCTGGTAATTC-CA-------AGATAT----TA--------GTAT
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                37870 41 +     46535 A-T-CCAAATAG-A-TATCAGCTGGTAATTC-CA-------AGATAT----TA--------GTAT
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              20611 41 -     29447 A-T-CCAAATAG-A-TATCAGCTGGTAATTC-CA-------AGATAT----TA--------GTAT
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.AANG03202589.1                                  373 41 -       609 A-T-CTAAATAG-A-AGCCAGCTGGCAATTG-CA-------AGACAC----ta--------gtat
i Felis_catus.AANG03202589.1                            n 990 C 0
s Felis_catus_fca126.CM031420.1                         129287302 41 - 158578461 A-T-CTAAATAG-A-AGCCAGCTGGCAATTG-CA-------AGACAC----ta--------gtat
i Felis_catus_fca126.CM031420.1                         I 855 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 28405 41 +     52776 A-T-CTAAATAG-A-AGCCAGCTGGCAATTG-CA-------AGACAC----TA--------GTAT
i Felis_nigripes.FelNig_flattened_line_8080             I 859 C 0
s Fukomys_damarensis.KN123630.1                          13896691 41 -  19261668 a-t-ctAAATAG-A-CACAAGCTGGCAACTT-TA-------AAACAT----CG--------Gtat
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     215844 41 -    847004 A-T-CTAAATAG-A-TGCCAGCTGGCAATTC-CA-------AGATAT----TA--------GTAT
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           18205 41 -     43889 A-T-CTAAATAG-A-TGCCAGCTGGCAATTC-CA-------AGATAT----TA--------GTAT
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          15349 41 +     27357 A-T-CTAAATAG-A-TGCCAGCTGGCAATTC-CA-------AGATAT----TA--------GTAT
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               160119 41 +    324696 A-T-CTAAATAG-A-CACCAGCTGGCAATTC-TA-------CGATAT----TG--------GTAT
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    187741 41 -    189561 A-T-CTAAATAG-A-AGCCAGTTGGCAATTT-TA-------AGGCAT----TA--------GTAT
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 1219 C 0
s Glis_glis.GliGli_scaffold_79770                           17020 41 -     18683 A-T-CTAAACAG-A-CACAAGCTGACAATTC-CA-------AGACAT----TG--------GTAA
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               9803 41 -     14630 A-T-CTAAATAG-A-AGCTAGTTGGTAATTC-CA-------AAATAA----TA--------GTAT
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119656903 41 - 195582420 A-T-CTAAATAG-A-AGCTAGTTGGTAATTC-CA-------AAATAA----TA--------GTAT
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   80332 41 +    118900 A-T-CTAAACAG-A-GACAAGCTGACAATTC-CA-------AGACAT----TG--------GTAA
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         6610 41 +     10286 A-T-CTAAATAG-A-TATCGGCTGTTAATTC-CA-------AGATAC----TA--------GTAT
i Hapalemur_alaotrensis.k141_1280836                    I 3 C 0
s Hapalemur_gilberti.k141_279011                             5088 41 -     11661 A-T-CTAAATAG-A-TATCGGCTGTTAATTC-CA-------AGATAC----TA--------GTAT
i Hapalemur_gilberti.k141_279011                        I 3 C 0
s Hapalemur_griseus.k141_1387522                            10415 41 +     56096 A-T-CTAAATAG-A-TATTGGCTGTTAATTC-CA-------AGATAC----TA--------GTAT
i Hapalemur_griseus.k141_1387522                        I 3 C 0
s Hapalemur_meridionalis.k141_186231                        33664 41 -     42470 A-T-CTAAATAG-A-TATCGGCTGTTAATTC-CA-------AGATAC----TA--------GTAT
i Hapalemur_meridionalis.k141_186231                    I 3 C 0
s Hapalemur_occidentalis.k141_797938                        50287 41 -     54384 A-T-CTAAATAG-A-TATCGGCTGTTAATTC-CA-------AGATAC----TA--------GTAT
i Hapalemur_occidentalis.k141_797938                    I 3 C 0
s Helogale_parvula.HelPar_flattened_line_22962              24035 41 +     53719 A-T-CTCACTAG-A-AGCCTGCTGGCAGTGG-CA-------AGACAT----TA--------GTAT
i Helogale_parvula.HelPar_flattened_line_22962          I 866 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                34871 41 -     91191 A-C-GTAAATAG-A-AGCCAGTTGGCAATTT-TA-------AGACAT----TA--------GTAT
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 1456 C 0
s Heterocephalus_glaber.JH602058.1                        2561188 41 +  31725842 a-t-cTAAATAG-G-CACAAGCTGGCAACTT-CA-------CGACAT----TG--------GGAT
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               63414 41 +     73687 A-T-CTAAATAG-A-AGCCAGCTGGCAACTT-GA-------AGACAT----GG--------GTCT
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              152079 41 +    277961 G-T-CTAAATAG-A-AGCCAGCTGGCAATTG-CA-------AGACAT----TA--------GTTT
i Hippopotamus_amphibius.HipAmp_scaffold_1308           I 884 C 0
s Hipposideros_armiger.JXIK01001085.1                      285108 41 -    477199 T-T-CTAAATAG-A-AGCCAGCTGGCAATTG-CA-------AGATAG----TA--------GCAA
i Hipposideros_armiger.JXIK01001085.1                   I 1549 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959               2794 41 +     26078 T-T-CTAAATAG-A-AGCCAGCTGGCAATTG-CA-------AGATAG----TA--------GCAA
i Hipposideros_galeritus.HipGal_scaffold_52959          I 1471 C 0
s Hoolock_leuconedys.ctg79                                      9718 41 -   7690867 A-T-CTAAATAG-A-AGCCAGTTGGTAATTC-CA-------AGACAG----TA--------GTAT
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 24468 48 -     67322 A-T-CTACATAG-A-AGCCAGCTGGCAATAG-CAAGACGCAAGACAT----TA--------GTAT
i Hyaena_hyaena.HyaHya_flattened_line_20729             I 826 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           21786 41 -    119109 A-T-CTGAACAG-A-CACAAGCTGGCAATGT-AA-------AGACAG----TG--------GCAT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_1816750                             2289 41 +      3202 A-T-CTAAATAG-A-AGCCAGTTGGTAATTC-CA-------AGATAG----TA--------GTAT
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1136966                               298 41 +      9785 A-T-CTAAATAG-C-AGCCAGTTGGTAATTC-CA-------AGATAG----TA--------GTGT
i Hylobates_agilis.k141_1136966                         C 0 C 0
s Hylobates_klossii.k141_468230                              3778 41 +      5464 A-T-CTAAATAG-A-AGCCAGTTGGTAATTC-CA-------AGATAG----TA--------GTGT
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14629124 41 -  25970782 A-T-CTAAATAG-A-AGCCAGTTGGTAATTC-CA-------AGATAG----TA--------GTAT
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            1676 41 +      4161 A-T-CTAAACAG-A-AGCCCGTTGGTAATTC-CA-------GGATAG----TA--------GTAT
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hylobates_pileatus_a.tarseq_592                             37232 35 -     60944 A-T-CTAAATAG-A-AGCCAGTTGGTAATTC-CA-------AGAGGA------------------
i Hylobates_pileatus_a.tarseq_592                         C 0 I 2881
s Hystrix_cristata.HysCri_scaffold_50788                    10091 41 +     22540 A-A-ACAAGTAG-A-CACAAGCTGGCAATTT-CA-------AGACAT----TG--------GTAG
i Hystrix_cristata.HysCri_scaffold_50788                C 0 I 1
s Ictidomys_tridecemlineatus.JH393315.1                   7130919 41 +  13083262 a-t-ctAAATAG-A-TACAAGCTGGCAATCC-CA-------AGACAT----TG--------Atat
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   2133 41 +      3484 A-T-CTAAATAG-A-TATCAGCTGGTAATTC-CA-------AGATAT----TA--------GTAT
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              14255 38 +     17520 A-T-CTAAATAG-A-AGCCAGCTGGCAATTG-CA-------AGAC-------A--------GTAT
i Inia_geoffrensis.IniGeo_flattened_line_66725          I 861 C 0
s Jaculus_jaculus.JH725517.1                              8579530 41 +  11848649 a-t-gtaCATAG-A-CAGAAGCTGCAAATTC-TA-------AGGTAT----TG--------GCAT
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               28890 38 +     37189 A-T-CTAAATAG-A-AGCCAGCTGGCAATTG-CA-------AGAC-------A--------GTAT
i Kogia_breviceps.KogBre_flattened_line_35920           I 877 C 0
s Lagothrix_lagothricha.k141_12968                          54573 41 -    147782 A-T-CTAAATAG-A-AGCCAGTTGGTAATTC-CA-------AGACAG----TT--------GTAT
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    6955 45 +     26176 A-T-GTAAATAA-A-AACCAGGTGGCGATTA-TA-------AGATATTAATTA--------GTAA
i Lasiurus_borealis.LasBor_scaffold_59542               I 883 C 0
s Lemur_catta.scaffold_1                                258411965 41 - 285822530 A-T-CTAAATAG-A-TATCGGCTGTTAATTC-CA-------AGATAT----TA--------GTAT
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        29271 41 +     39228 A-T-CTGAATAG-A-TATCATCTGGCAATTC-CA-------AAATAT----TA--------GTAT
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            58635 41 +     63517 A-T-CTGAATAG-A-TATCATCTGGCAATTC-CA-------AAATAT----TA--------GTAT
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        37015 41 -     38897 A-T-CTGAATAG-A-TATCATCTGGCAATTC-CA-------AAATAT----TA--------GTAT
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      3061 41 -     13103 A-T-CTGAATAG-A-TATCATCTGGCAATTC-CA-------AAATAT----TA--------GTAT
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3092796 41 -   3498232 A-T-CTAAATAG-A-AGCCAGCTGGCAATTG-TA-------AGAcat----ta--------gtat
i Leptonychotes_weddellii.KB714749.1                    I 822 C 0
s Lepus_americanus.LepAme_scaffold_62849                    21591 32 +     22452 G-T-CTAAATAG-A-TGGCAGCTGTGGATTC-TA-------AGA---------------------
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            141195 38 +   3060487 A-T-CTAAATAG-A-AGCCAGCTGGCAATTG-CA-------AGAC-------A--------GTAT
i Lipotes_vexillifer.KE558548.1                         I 867 C 0
s Lophocebus_aterrimus.ctg55                             19253008 41 +  19376315 A-C-TTAAATAG-A-AGGCAGTTGGTAATTC-CA-------AGATAG----TA--------GTAT
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           15807 41 +     84689 A-T-CTAAATAG-A-TGCTAGCTGGCAATTC-CA-------AGGTAT----TA--------GTAT
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3783545 41 +   6799190 A-T-CTAAATAG-A-TGCTAGCTGGCAATTC-CA-------AGGTAT----TA--------GTAT
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20599339 41 -  62548349 A-T-CTAAATAG-A-ATCCAGCTGGCAACTT-CA-------AGACAT----TG--------GCAT
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11096563 41 +  39895028 a-t-cTGAATAG-A-AATCATTTGGCAACTG-TA-------AAACAT----ta--------gtat
i Lycaon_pictus.CM007556.1                              I 836 C 0
s Macaca_arctoides.k141_2201161                             24759 41 +     74745 A-T-CTAAATAG-A-AGGCAGTTGGTAATTC-CA-------AGATAG----TA--------GTAT
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12711220 41 +  12821369 A-T-CTAAATAG-A-AGGCAGTTGGTAATTC-CA-------AGATAG----TA--------GTAT
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                3793 41 -     26467 A-T-CTAAATAG-A-AGGCAGTTGGTAATTC-CA-------AGATAG----TA--------GTAT
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           51664 41 +     63263 A-T-CTAAATAG-A-AGGCAGTTGGTAATTC-CA-------AGATAG----TA--------GTAT
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 3774 41 -     26361 A-T-CTAAATAG-A-AGGCAGTTGGTAATTC-CA-------AGATAG----TA--------GTAT
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 6964 41 -      7381 A-T-CTAAATAG-A-AGGCAGTTGGTAATTC-CA-------AGATAG----TA--------GTAT
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  50193 41 -     79256 A-T-CTAAATAG-A-AGGCAGTTGGTAATTC-CA-------AGATAG----TA--------GTAT
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196040291 41 + 196197964 A-T-CTAAATAG-A-AGGCAGTTGGTAATTC-CA-------AGATAG----TA--------GTAT
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11450461 41 +  11645122 A-T-CTAAATAG-A-AGGCAGTTGGTAATTC-CA-------AGATAG----TA--------GTAT
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   9147 41 -     46448 A-T-CTAAATAG-A-AGGCAGTAGGTAATTC-CA-------AGATAG----TA--------GTAT
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                6810 41 -     13212 A-T-CTAAATAG-A-AGGCAGTTGGTAATTC-CA-------AGATAG----TA--------GTAT
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 20490 41 -     55006 A-T-CTAAATAG-A-AGGCAGTTGGTAATTC-CA-------AGATAG----TA--------GTAT
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43845605 41 +  43892939 A-T-CTAAATAG-A-AGGCAGTTGGTAATTC-CA-------AGATAG----TA--------GTAT
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               21774 41 -     24607 A-T-CTAAATAG-A-AGGCAGTTGGTAATTC-CA-------AGATAG----TA--------GTAT
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               9144 41 -     27140 A-T-CTAAATAG-A-AGGCAGTTGGTAATTC-CA-------AGATAG----TA--------GTAT
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4376               200444 41 +    248908 T-G-CTAAGTAG-A-AGCCAGCTGGCAATCG-CA-------AGGTAT----TA--------GTAA
i Macroglossus_sobrinus.MacSob_scaffold_4376            n 802 I 14
s Mandrillus_leucophaeus.scaffold125                     43442180 41 -  43563597 A-T-TTAAATAG-A-AGGCAGTTGGTAATTC-CA-------AGATAG----TA--------GTAT
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4454984 41 -   4543643 A-T-TTAAATAG-A-AGGCAGTTGGTAATTC-CA-------AGATAG----TA--------GTAT
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            153549 41 +    252755 A-T-CTAAATAG-A-AGAAAGCTGGCAATTG-CA-------AAACTT----CA--------GTat
i Manis_javanica.JSZB01003966.1                         I 874 C 0
s Manis_pentadactyla.KN017078.1                             41153 39 +     58827 ----TTAAGTAG-A-AGAAAGCTGGCAATTG-CA-------AAACTT----CA--------GTAT
i Manis_pentadactyla.KN017078.1                         I 884 C 0
s Marmota_marmota.CZRN01000005.1                         36878786 41 +  64221397 a-t-ctAAATAG-A-TACAAGCTGGCAATTC-CA-------AGACAT----TG--------ATat
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       67048 41 -    234502 A-T-CTAAATAG-A-GGGCAGCTGGCAATTG-CA-------AGCTAT----TA--------GTGA
i Megaderma_lyra.MegLyr_scaffold_3562                   I 943 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             7945 41 -     87323 A-T-CTAACTAG-A-AGCCAGTTGGCAATTG-TA-------AGACAT----TA--------GTAT
i Mellivora_capensis.MelCap_flattened_line_15433        I 841 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 2588 41 +    115071 A-T-CTGCATAG-A-TATAAACTTGCAACTA-TA-------AGTCAA----TG--------ATTT
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1052061 41 -  26018355 A-T-CTGCATAT-A-CATGAACTTGCAATCA-TA-------CGACAA----TG--------GCAT
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    3846 38 -     12939 A-T-CTAAATAG-A-AGCCAGCTGGCAATTT-CA-------AGAC-------A--------GTAT
i Mesoplodon_bidens.MesBid_scaffold_96348               I 861 C 0
s Microcebus_murinus.CM007691.1                          16514996 41 +  47401472 a-t-cTAAATAG-A-TATCATCTGGGAATTC-CA-------AGATAT----TA--------GTAT
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  42020 41 -     48017 A-T-CTAAATAG-A-AGCCAGCTGGCAAATT-TA-------AGTCAT----TG--------GTAT
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               26366 45 -     32043 A-T-CTAAATGG-A-AGCCAGCTGACAATTG-CA-------AGGTATTAATTA--------GTAA
i Micronycteris_hirsuta.MicHir_scaffold_37978           I 902 C 0
s Microtus_ochrogaster.CM001673.1                        22825148 41 -  98408828 A-T-CTATATAT-A-CATAATCTTGCAATTA-AA-------TGACAA----TG--------AAAT
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8214531 45 +  10048721 C-T-CTAAATAG-A-AACCAGCTAGCAAGCT-CA-------AGATATCAATTA--------GCAA
i Miniopterus_natalensis.LDJU01000022.1                 I 995 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            38989 45 +     45743 C-T-CTAAATAG-A-AACCAGCTAGCAAGCT-CA-------AGATATCAATTA--------GCAA
i Miniopterus_schreibersii.MinSch_scaffold_24116        I 962 C 0
s Miopithecus_ogouensis.k141_2935907                         6726 41 +     29742 A-T-CTAAATAG-A-AGGCAGTGGGTAATTC-CA-------AGATAG----TA--------GTAT
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        18292 41 -    104932 A-T-CTAAATAG-A-AGCCAGCTGGCAATTG-TA-------AAATAT----TA--------GTAT
i Mirounga_angustirostris.MirAng_flattened_line_8852    I 822 C 0
s Mirza_zaza.k141_593947                                     5679 41 -     12809 A-T-CTAAATAG-A-TATCACCTGGGAATTC-CA-------AGATAT----TA--------GTAT
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 151621 38 +    154973 A-T-CTAAATAG-A-AGCCAGCTGGCAACTG-CA-------AGAC-------A--------GTAT
i Monodon_monoceros.MonMon_M_scaffold_5598              I 862 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                164882 45 +    265003 a-t-ctaaatgG-A-AGCGAGTTGGCAATTG-CA-------AGATATTAATTA--------GTAA
i Mormoops_blainvillei.MorMeg_scaffold_2952             I 895 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  8349 41 -     19904 A-G-CTAAATAG-A-AGCCAGTTAGCAATTT-TA-------AGACAT----TC--------ATTT
i Moschus_moschiferus.MosMos_scaffold_78805             I 1585 I 71
s Mungos_mungo.MunMun_flattened_line_8729                  151774 41 -    168139 A-T-CTCACCAG-A-AGCCTGCTGGCAGTGG-CA-------AGATAT----TA--------GTAT
i Mungos_mungo.MunMun_flattened_line_8729               I 928 C 0
s Murina_feae.MurFea_scaffold_2254                          25697 45 -    100666 A-T-TTAAATAA-A-AACCAGCTGACAATGG-TA-------AGATATTGATTA--------GTAA
i Murina_feae.MurFea_scaffold_2254                      I 749 C 0
s Mus_caroli.LT608236.1                                  70772408 41 +  92629107 a-t-ctgCATAG-A-TGTAAActtgcaacca-ta-------agaaaa----tg--------ctat
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75494462 41 +  98207768 a-t-ctgCATAG-A-TGTAAACTTGCAACCA-TA-------AGAAAA----TG--------CTat
i Mus_musculus.chr16                                    I 1 C 0
s Mus_pahari.LT608305.1                                  67561216 41 +  89017189 g-t-cTACATAG-A-TGTAAACTTGCAACTG-TA-------AAACAA----TG--------Ctat
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74337185 41 +  97876770 g-t-cTGCATAG-A-TGTAAACTTGCAACCA-TA-------AGAAAA----Tg--------ctat
i Mus_spretus.CM004110.1                                I 1 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             15424 41 +     98495 A-T-CTAAACAG-G-CACAAACTGACAATTC-CA-------AAACAT----TG--------GTAA
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4430052 41 -  28371801 a-t-cTAAATAG-A-AGCCAGTTGGCAATTG-TA-------AGAtat----ta--------gtat
i Mustela_putorius.JH417978.1                           I 840 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     96189 41 -    117718 A-T-TTAAATAG-G-CACAAGTTGGAAATTT-AA-------AGACAC----TG--------GCAT
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               972711 45 +   8389877 a-T-CTAAATAA-A-AACCAGCTTGCAGTTA-TA-------AGATATTAATTA--------GTAA
i Myotis_brandtii.KE161952.1                            I 885 C 0
s Myotis_davidii.KB114863.1                               5023802 30 +   6462685 -------------------AGCTTGCAGTTA-TA-------AGATATTAATTA--------GTAA
i Myotis_davidii.KB114863.1                             I 562 C 0
s Myotis_lucifugus.GL429887.1                             3470216 45 -   3747815 a-T-CTAAATAA-A-AACCAGCTTGCAGTTA-TA-------AGATAGTAATTA--------GTAA
i Myotis_lucifugus.GL429887.1                           I 884 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        15449 45 +     66751 A-T-CTAAATAA-A-AACCAGCTTGCAGTTA-TA-------AGATATTAATTA--------GTAA
i Myotis_myotis.MyoMyo_scaffold_6123                    I 884 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             8206 40 -      8794 A-T-CTAAATAG-A-AACTAGCTGGCAATTC-CA-------AGTCAT----TG--------GTA-
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            121607 30 +    362372 ---------------CATAAATGAACAAATC-TA-------AGACAT----TG--------GTAt
i Nannospalax_galili.KL201303.1                         I 1041 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4491687 41 -  14209539 A-T-CTAAATAG-A-AGCCAGCTGGCAATTG-TA-------AGAcat----ta--------gtat
i Neomonachus_schauinslandi.NINY01007774.1              I 819 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3956212 38 -   4490290 a-T-CTAAATAG-A-AGCCAGCTGGCAACTG-CA-------AGAC-------A--------GTAT
i Neophocaena_asiaeorientalis.KZ688543.1                I 862 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  52196 45 +     94413 A-T-CTAAATAG-A-AGCCAATTGGCAATTG-CA-------AGATGTTACTTA--------GCAA
i Noctilio_leporinus.NocLep_scaffold_12062              I 1131 C 0
s Nomascus_annamensis.k141_762468                             795 41 -      2755 A-T-CTAAATAG-A-AGCCAGTTGGTAATTC-CA-------AGATAG----TA--------GTAT
i Nomascus_annamensis.k141_762468                       C 0 C 0
s Nomascus_concolor.k141_256540                              7407 41 -      8966 A-T-CTAAATGG-A-AGCCAGTTGGTAATTC-CA-------AGATAG----TA--------GTAT
i Nomascus_concolor.k141_256540                         C 0 C 0
s Nomascus_gabriellae.k141_1400361                           1346 41 -      2203 A-T-CTAAATAG-A-AGCCAGTTGGTAATTC-CA-------AGATAG----TA--------GTAT
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_453                             6658 41 +     12787 A-T-CTAAATAG-A-AGCCAGTTGGTAATTC-CA-------AGATAG----TA--------GTAT
i Nomascus_siki_b.tarseq_453                        C 0 C 0
s Nomascus_siki_a.k141_421408                                  1260 41 +     16235 A-T-CTAAATAG-A-AGCCAGTTGGTAATTC-CA-------AGATAG----TA--------GTAT
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                39432 41 +   3668941 A-T-CTGAATAG-A-AGCCATTTGGCAACTG-TA-------AGACAT----ta--------gtat
i Nyctereutes_procyonoides.CAJHUB010000786.1            I 840 C 0
s Nycticebus_bengalensis.LG16                            65572470 41 -  95554990 A-T-TTAAATAG-A-TGCCAGCTGGCAATTG-CA-------AGATAT----TA--------GTAT
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_771591                            15880 41 +     16181 A-T-TTAAATAG-A-TGCCAGCTGGCAATTG-CA-------AGATAT----TA--------GTAT
i Nycticebus_coucang.k141_771591                        C 0 I 10
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65680658 41 +  89412551 A-T-CTAAATAG-A-TGCCAGCTGGCAATTG-CA-------AGATAT----TA--------GTAT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            5000646 32 -  23139505 g-t-ccAAATAG-A-TGGCAGTTGTTGATTC-TA-------AGA---------------------
i Ochotona_princeps.JH802095.1                          C 0 I 3
s Octodon_degus.JH651621.1                                3691526 41 +  10294119 A-T-CTAAATAG-G-CACAAGCTGGCAATTT-AA-------AGACAT----TG--------GCat
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             686388 34 -   3126709 A-T-CTAAATAG-A-AGCCAGCTGGCAATTG-TA-------Agaca-------------------
i Odobenus_rosmarus.KB229369.1                          I 816 I 4
s Odocoileus_virginianus.KZ101650.1                       1085399 41 +   1425656 a-T-CTAAATAG-A-AACCAGTTGGCAATTT-TA-------AGACAT----TA--------GAAT
i Odocoileus_virginianus.KZ101650.1                     I 1205 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         43464 41 +     78940 A-T-CCAAATAG-A-AGCCAGTCGGCAATTT-TA-------AGGCAT----TA--------GTAT
i Okapia_johnstoni.LVCL01S0017931.1                     I 1201 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  130936 41 +    145789 A-T-CTGTATAT-A-CATAAACTTGCCATTA-TA-------TGACAA----TG--------AAAT
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  43830 41 +     62360 A-T-CTGCATAT-A-CATAAACTTGCAATTA-TA-------TGACAA----TA--------GTGT
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7229893 38 -   7562323 a-T-CTAAATAG-A-AGCCAGCTGGCAACTG-CA-------AGAC-------A--------GTAT
i Orcinus_orca.KB316965.1                               I 869 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              64737 41 -     66828 A-T-CTAAATAG-A-AGCCAACTGGCAAATT-TA-------AGACAT----TG--------GTAT
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141884607 32 + 163896628 G-T-CTAAATAG-A-TGCCAGCTGTGGATTC-TA-------AGA---------------------
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      316570 41 -    505867 A-T-CTGAATAG-A-AGCCATTTGGCAACTG-TA-------AGACAT----ta--------gtat
i Otocyon_megalotis.JAEUCK010005121.1                   I 840 C 0
s Otolemur_crassicaudatus.k141_505435                        5706 41 -     53940 A-T-CTTAATAG-A-TGCCAGCTGGCAATTC-CA-------AGATAT----TA--------GAAT
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18013675 41 -  38779656 A-T-CTAAATAG-A-TGCCAGCTGGCAATTC-CA-------AGATAT----TA--------GTAT
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134084656 41 - 275406953 A-C-CTAAATAG-A-AGCCAGTTGGCAATTT-TA-------AGACAT----TA--------GTAT
i Ovis_aries.CM001582.2                                 I 1455 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      85894 41 +    140051 A-T-CTAAACAG-A-AGCCAGTTGGCAATTT-TA-------AGACAT----TA--------GTAT
i Ovis_canadensis.OviCan_scaffold_6251                  I 1459 C 0
s Pan_paniscus.CM003386.1                               127579082 41 - 205426864 A-T-CTAAATAG-A-AGCCAGTTGGTAATTC-CA-------AAATAA----TA--------GTAT
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.KZ622857.1                               334009 41 +    772158 A-T-CTAAATAG-A-AGCCAGTTGGTAATTC-CA-------AGATAA----TA--------gtat
i Pan_troglodytes.KZ622857.1                            I 26 I 50
s Panthera_onca.PanOnc_flattened_line_1615                  41327 41 +    295523 A-T-CTAAATAG-A-AGCCAGCTGGCAATTG-CA-------AGACAC----TA--------GTAT
i Panthera_onca.PanOnc_flattened_line_1615              I 861 C 0
s Panthera_pardus.KV860323.1                              3645143 41 +  18214204 A-T-CTAAATAG-A-AGCCAGCTGGCAATTG-CA-------AGACac----ta--------gtat
i Panthera_pardus.KV860323.1                            I 862 C 0
s Panthera_tigris.KE721879.1                              5034784 41 -   6340057 A-T-CTAAATAG-A-AGCCAGCTGGCAATTG-TA-------AGACAC----ta--------gtat
i Panthera_tigris.KE721879.1                            I 855 C 0
s Pantholops_hodgsonii.KE114631.1                         1073526 41 -   1292953 A-C-CTAAATAG-A-AGCCAGTTGGCAATTT-TA-------AGACAT----TA--------GTAT
i Pantholops_hodgsonii.KE114631.1                       I 1454 C 0
s Papio_anubis.CM001492.2                               188160969 41 - 188283584 a-t-ttaaatag-a-agGCAGTTGGTAATTC-CA-------AGATAG----TA--------GTAT
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              4059 41 +     25005 A-T-TTAAATAG-A-AGGCAGTTGGTAATTC-CA-------AGATAG----TA--------GTAT
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47518341 41 +  47705337 A-T-TTAAATAG-A-AGGCAGTTGGTAATTC-CA-------AGATAG----TA--------GTAT
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 72332 41 -    104429 A-T-TTAAATAG-A-AGGCAGTTGGTAATTC-CA-------AGATAG----TA--------GTAT
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   10864 41 +     14967 A-T-TTAAATAG-A-AGGCAGTTGGTAATTC-CA-------AGATAG----TA--------GTAT
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 6729 41 -      7628 A-T-TTAAATAG-A-AGGCAGTTGGTAATTC-CA-------AGATAG----TA--------GTAT
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    122797 41 -    135482 A-T-CTAAATAG-A-TGCCAGCTGGCGATTG-CA-------AGACAT----TA--------GTAT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 I 849 C 0
s Perodicticus_ibeanus.k141_117958                          11370 41 -     23713 A-T-CTAAATAG-A-TGCCAGTTGGCAATTC-CA-------AGATAT----TA--------GTAT
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           12521 41 +     61070 A-T-CTAAATAG-A-TGACAGCTGGCAATTC-CA-------AGATAT----TA--------GTAT
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       2839 41 +     49596 A-A-CTAAATTG-A-TACAAGCTGTCCATTA-TA-------AGACAT----TA--------GTAG
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4955999 41 -   8017169 A-T-CTGCATAT-A-CATAAACTTCCAATTA-TA-------TGACAA----TG--------GTAT
i Peromyscus_maniculatus.KI615518.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    17531 41 -     36578 A-G-CTAAATCA-A-CACCAACTGGCAATCT-CA-------ATACAT----TA--------ATAT
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              4353 38 +      8220 A-T-CTAAATAG-A-AGCCAGCTGGCAACTG-CA-------AGAC-------A--------GTAA
i Phocoena_phocoena.PhoPho_flattened_line_53071         I 862 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306           100993 17 +    112873 ---------------------------------A-------AGGTATTAATTA--------GTAA
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        I 883 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990          10835 38 +     21690 A-T-CTAAATAG-A-AGCCAGCTGGCAACTG-CA-------AGAC-------A--------GTAT
i Platanista_gangetica.PlaMin_flattened_line_72990      I 867 C 0
s Plecturocebus_bernhardi.k141_959214                       26663 41 +     44506 A-T-ATAAATAG-A-AGCCAATTGGTAATTC-CA-------AGACAG----TA--------GTAT
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        26876 41 +     67491 A-T-ATAAATAG-A-AGCCAATTGGTAATTC-CA-------AGACAG----TA--------GTAT
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      17115 41 -     98129 A-T-ATAAATAG-A-AGCCAATTGGTAATTC-CA-------AGACAG----TA--------GTAT
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     26716 41 +    147771 A-T-ATAAATAG-A-AGCCAATTGGTAATTC-CA-------AGACAG----TA--------GTAT
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         3351 41 -     43940 A-T-ATAAATAG-A-AGCCAATTGGTAATTC-CA-------AGACAG----TA--------GTAT
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          7434 41 -     55515 A-T-ATAAATAG-A-AGCCAATTGGTAATTC-CA-------AGACAG----TA--------GTAT
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         26788 41 +    152463 A-T-ATAAATAG-A-AGCCAATTGGTAATTC-CA-------AGACAG----TA--------GTAT
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       4596 41 -    119457 A-T-ATAAATAG-A-AGCCAATTGGTAATTC-CA-------AGACAG----TA--------GTAT
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         16510 41 +    134592 A-T-ATAAATAG-A-AGCCAATTGGTAATTC-CA-------AGACAG----TA--------GTAT
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          27098 41 -     75465 A-T-ATAAATAG-A-AGCCAATTGGTAATTC-CA-------AGACAG----TA--------GTAT
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              191713 41 -    373494 A-T-CTAAATAG-A-AGCCAGTTGGTAATTC-CA-------AAATAA----TA--------GTAT
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19812360 41 +  19899266 A-T-CTAAATAG-A-AGCCAGTTGGTAATTC-CA-------AAATAA----TA--------GTAT
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                4520 41 -      9567 A-T-CTAAATAG-A-AGCCAGCTGGCAACTT-CA-------AGACAT----GG--------GTCT
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6853336 41 +  12164890 a-t-ctaaatag-a-taTCGGCTGTTAATTC-CA-------AGATAC----TA--------GTAT
i Prolemur_simus.MPIZ01000048.1                         I 3 C 0
s Propithecus_coquerelli.NW_012147863.1                     22146 40 -     30946 N-N-N-NNNNNN-N-NNNNNNNNNNNNNNNN-NN-------NNNNNN----NN--------NNNN
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         8424 40 +     11805 A-T-C-AAACAG-A-TATCAGCTAGTAATTC-CA-------AGAGAT----TA--------ATAT
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           47758 40 +     52369 A-T-C-AAACAG-A-TATCAGCTAGTAATTC-CA-------ATAGAT----TA--------ATAT
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         40145 40 -     44753 A-T-C-AAACAG-A-TATCAGCTAGTAATTC-CA-------AGAGAT----TA--------ATAT
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            22068 40 +     27322 A-T-C-AAACAG-A-TATCAGCTAGTAATTC-CA-------ATAGAT----TA--------ATAT
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       21717 40 -     53241 A-T-C-AAACAG-A-TATCAGCTAGTAATTC-CA-------AGAGAT----TA--------ATAT
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         43980 40 -     48185 A-T-C-AAACAG-A-TATCAGCTAGTAATTC-CA-------AGAGAT----TA--------ATAT
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           39565 41 +     77221 A-T-CTGCACAG-A-TATAAACTTGCAACTA-TA-------AGTCAA----TG--------ATTT
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            7534 45 -     27784 a-T-CTAAATGG-A-AGCCAGCTGGCAATAG-CA-------AGATATTAACTA--------GTAA
i Pteronotus_parnellii.KE867983.1                       I 911 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        251695 41 -    344369 A-T-CTAAATAG-A-AGCCAGTTGGCAATTA-TA-------AGACAT----TA--------GTAT
i Pteronura_brasiliensis.PteBra_flattened_line_1343     I 838 C 0
s Pteropus_alecto.KB030474.1                              8976726 42 -  19980961 T-T-CTAAATAGGA-AGCCAGCTGGCAATTG-CA-------AGGTAT----TA--------GTAA
i Pteropus_alecto.KB030474.1                            n 869 C 0
s Pteropus_vampyrus.KN525782.1                            3455789 42 -   6428604 T-T-CTACATAGGA-AGCCAGCTGGCAATTG-CA-------AGGTAT----TA--------GTAA
i Pteropus_vampyrus.KN525782.1                          n 863 I 46
s Puma_concolor.QAVW01000427.1                          131541262 41 - 161321710 A-T-CTAAATAG-A-AGCCAGCTGGCAATTG-CA-------AGACAC----ta--------gtat
i Puma_concolor.QAVW01000427.1                          I 684 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                22243 41 +     68503 A-T-CTAAATAG-A-AGCCAGTTGGCAATTT-TA-------AGACAT----TA--------GTAT
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 1184 C 0
s Rattus_norvegicus.chr11                                13918225 41 +  90463843 a-t-ctgCATAA-A-TGTAAACTTGGAACCA-AA-------AGACAG----TG--------CTTC
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1794162 41 +   2252614 T-T-GTAAATAC-A-AGCCAGCTGGCAACTG-CA-------AGGTAT----TA--------GTAT
i Rhinolophus_sinicus.LVEH01000179.1                    I 1032 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_21814                2799 41 -     44886 T-T-CTAAATAG-A-AGCCAGCTGGCAATTG-CA-------AGGTAT----TC--------GTAA
i Rousettus_aegyptiacus.RouAeg_scaffold_21814           n 881 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                      2924 40 -      4338 A-T-CTAAATAG-A-AGCCAGA-GGCAATGT-TA-------AGACAT----TA--------GTAT
i Saiga_tatarica.SaiTat_scaffold_371890                 I 1456 C 0
s Saimiri_boliviensis.NW_024100938.1                     15677120 41 -  43202129 A-T-CTAAATAG-A-AGCCAGTTGGTGATTC-CA-------AGACAG----TA--------GTAT
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        9033 41 +     34089 A-T-CTAAATAG-A-AGCCAGTTGGTGATTC-CA-------AGACAG----TA--------GTAT
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              8973 41 -     60842 A-T-CTAAATAG-A-AGCCAGTTGGTGATTC-CA-------AGACAG----TA--------GTAT
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              9067 41 +     67014 A-T-CTAAATAG-A-AGCCAGTTGGTGATTC-CA-------AGACAG----TA--------GTAT
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              9044 41 +     60816 A-T-CTAAATAG-A-AGCCAGTTGGTGATTC-CA-------AGACAG----TA--------GTAT
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 8981 41 -     76454 A-T-CTAAATAG-A-AGCCAGTTGGTGATTC-CA-------AGACAG----TA--------GTAT
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17345766 41 -  30362882 A-T-CTAAATAG-A-AGCCAGTTGGTAATTC-CA-------AGACAG----TA--------GCAT
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         25087 41 -     62485 A-T-CTAAATAG-A-AGCCAGTTGGTAATTC-CA-------AGACAG----TA--------GCAT
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   40994 18 -    114521 A-A-CTTTCTGG-T-CATCAGT-------------------------------------------
i Scalopus_aquaticus.ScaAqu_scaffold_9300               I 872 I 2
s Sigmodon_hispidus.SigHis_scaffold_11332                  105995 41 -    120886 A-T-CTTCATAT-A-CATAAATTTGCAATTA-CA-------TGACAA----TG--------GTAT
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            25631 41 +    739146 A-T-TTACATAG-A-AGCTAGTTTGCCATTG-TA-------AGATTT----CA--------CAAT
i Solenodon_paradoxus.SolPar_flattened_line_1012        I 1528 C 0
s Sorex_araneus.JH798170.1                               17775770 41 -  27805282 A-T-CTAAGTAG-A-AATCATGAAGCAATTT-GA-------AGGCAA----CA--------GTCT
i Sorex_araneus.JH798170.1                              I 1436 C 0
s Spermophilus_dauricus.KZ294190.1                        2244620 41 +   2842873 a-t-ctAAATAG-A-TACAAGCTGGCAATTC-CA-------AGACAT----TG--------ATat
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             240469 41 -    276980 A-T-CTAAATAG-A-AGCCAGTCAGCAATTA-TA-------AGACAT----TA--------GTAT
i Spilogale_gracilis.SpiGra_flattened_line_905          I 822 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            34664 41 +     62062 A-T-CTCACTAG-A-AGCCTGCTGGCAGTGG-CA-------AGACAT----TA--------GTAT
i Suricata_suricatta.SurSur_flattened_line_20339        I 903 C 0
s Sus_scrofa.CM000824.4                                 189276677 35 + 218635234 A-T-CTATATAG-A-AGCCAAGTGGGAATTA-CA-------AGACAT------------------
i Sus_scrofa.CM000824.4                                 I 1162 C 0
s Symphalangus_syndactylus.tarseq_24                        19383 41 -  13920577 A-T-CTAAATAG-A-AGCCAGTTGGTAATTC-CA-------AGATAG----TA--------GTAT
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                3782 45 +     20549 A-T-CTAAATAG-A-ATTCAGTTGGCAATTG-AA-------ATATATTAATTA--------GGTA
i Tadarida_brasiliensis.TadBra_scaffold_61492           I 893 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               17879 41 +     45698 A-T-CTAAATAG-A-AACAAGCTGGCAATTC-CA-------AGTCAT----TG--------GTAA
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      812248 41 +   1148477 a-t-cTAAATAA-A-AGCTAGCTGGCGATTG-CA-------AGACAT----TA--------ACAT
i Tapirus_indicus.TapInd_scaffold_176                   I 886 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  62891 41 +     99546 a-t-cTAAATAA-A-AGCCAGCTAGCGATTG-CA-------AGACGT----TA--------GCAT
i Tapirus_terrestris.TapTer_scaffold_14939              I 887 C 0
s Theropithecus_gelada.CM009951.1                       194012502 41 - 194193292 a-t-ttaaatag-a-agGCAGTTGGTAATTC-CA-------AGATAG----TA--------GTAT
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                  1045 48 -      3104 A-T-CTAAATAG-A-AGTCAGCTGGTAA-TC-AA-------AGACAT----CAAGACATCGATAC
i Tolypeutes_matacus.TolMat_scaffold_475685             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  139544 44 -    259118 A-T-CTA-ACGG-A-AGCCAGGTGGCAATTG-CA-------AGATATTAATTA--------GTAA
i Tonatia_saurophila.TonSau_scaffold_3334               I 910 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                  10231 41 +     90398 a-T-CCAAATAG-A-AGCCACCTGGCAATTA-TA-------AGGCAT----TA--------ATAT
i Tragulus_javanicus.TraJav_scaffold_14717              I 743 C 0
s Trichechus_manatus.JH594618.1                          16090410 41 +  31416278 G-T-CTAAACAG-A-AGCCAGCTGGCAACTT-CA-------AGACAT----TG--------GTAT
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2801683 41 -   3938065 A-G-GCAACTGG-G-AACCAAATGGCAATTC-CA-------AGATAT----TG--------GTAT
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                   10506 41 +     13056 A-G-GTAACTGG-G-AACCAAATGGCAATTC-CA-------AGATAT----TG--------GTAT
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69318623 38 -  96451834 a-T-CTAAATAG-A-AGCCAGCTGGCAACTG-CA-------AGAC-------A--------GTAT
i Tursiops_truncatus.MRVK01000923.1                     I 869 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                    1382 18 +    136657 A-T-TTTCATGA-C-AATTAGT-------------------------------------------
i Uropsilus_gracilis.UroGra_scaffold_4115               I 796 I 2
s Ursus_maritimus.KK498671.1                              6522118 41 +  28682327 A-T-CTAAATAG-A-AGCCAGCTGGCAATTG-TA-------AGACAT----TA--------GTAT
i Ursus_maritimus.KK498671.1                            I 838 C 0
s Varecia_rubra.k141_432109                                  9982 41 -     20643 A-T-CTAAATAG-A-TATCGGCTGGTAATTC-CA-------AGATAT----TA--------GTAT
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             29517 41 -     33872 A-T-CTAAATAG-A-TATCGGCTGGTAATTC-CA-------AGATAT----TA--------GTAT
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1529646 40 -   2331223 A-A-CTAAACAG-A-AGCTGGCTGGCAATTG-CA-------AGACa-----ca--------gtat
i Vicugna_pacos.KN269600.1                              I 852 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                145797 41 -    281493 a-t-cTGAATAG-A-AGCCATTTGGCAACTG-TA-------AGACAT----TA--------GTAT
i Vulpes_lagopus.VulLag_flattened_line_2045             I 840 C 0
s Xerus_inauris.XerIna_scaffold_7898                       132115 41 -    134049 A-T-CTAAATAG-A-TACAAGCTGGCAATTC-CA-------AGACAT----TG--------ATAT
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        221248 34 -    227762 A-T-CTAAATAG-A-AGCCAGCTGGCAATTG-TA-------AGACA-------------------
i Zalophus_californianus.ZalCal_flattened_line_4097     I 819 I 4
s Zapus_hudsonius.ZapHud_scaffold_202118                     1598 41 -      3360 A-T-CTGCATAG-A-CACAAGCTGAAAATTC-TA-------TGATAT----TG--------GTAT
i Zapus_hudsonius.ZapHud_scaffold_202118                I 2 I 10
s Ziphius_cavirostris.ZipCav_flattened_line_60625            3208 38 -     13665 A-T-CTAAATAG-A-AGCCACCTGGCAATTG-CA-------AGAC-------A--------GTAT
i Ziphius_cavirostris.ZipCav_flattened_line_60625       I 715 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Trachypithecus_pileatus.k141_532233                       30126  0 -     40754 I
e Trachypithecus_phayrei.ctg364                            232455  0 -   1198723 I
e Trachypithecus_obscurus.k141_411399                         131  0 +     12010 I
e Trachypithecus_melamera.k141_950981                        2232  0 -      3512 I
e Trachypithecus_leucocephalus.k141_352489                   1214  0 +      9423 I
e Trachypithecus_laotum.k141_897381                         45646  0 -     53586 I
e Trachypithecus_hatinhensis.k141_641377                     1240  0 +      1365 I
e Trachypithecus_germaini.k141_240878                        5067  3 -     24955 I
e Trachypithecus_geei.k141_137495                           30106  0 -     42322 I
e Trachypithecus_francoisi.k141_1012484                       874  0 +      8809 I
e Trachypithecus_cristatus.k141_968903                      32589  3 +     43409 I
e Trachypithecus_crepusculus.k141_863597                     4944  0 -     23436 I
e Trachypithecus_auratus.k141_672638                         4947  3 +     38635 I
e Tarsius_wallacei.k141_48636                               64696  0 +     65473 C
e Tarsius_lariang.k141_609102                               31387  0 +     42269 C
e Semnopithecus_vetulus.k141_748269                          4706  0 +     17284 I
e Semnopithecus_schistaceus.k141_628310                     45652  0 -     53123 I
e Semnopithecus_priam.k141_368201                           10107  0 -     20692 I
e Semnopithecus_johnii.k141_1300894                          1368  0 +     13764 I
e Semnopithecus_hypoleucos.k141_2141024                      1351  0 -      8815 I
e Semnopithecus_entellus.k141_1743075                       45578  0 +     45790 I
e Rhinopithecus_strykeri.ctg241                            462135  0 +   1472273 I
e Rhinopithecus_bieti.k119_554384                            2917  0 -     17045 C
e Pygathrix_nigripes_a.k141_758202                             3050  0 -      8240 I
e Pygathrix_nigripes_b.ctg25                                14340869  0 -  15297009 I
e Pygathrix_cinerea.k141_951151                              3033  0 -      8225 I
e Presbytis_mitrata.k141_1767317                            10996  0 +     15869 I
e Presbytis_comata.k141_678168                              11007  0 +     11126 I
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000342.1                3428480  0 -   4356645 I
e Piliocolobus_kirkii.k141_451083                            4879  0 -     13367 I
e Piliocolobus_gordonorum.k141_736355                       29715  0 +     67079 I
e Piliocolobus_badius.k141_512007                           29798  0 +     37672 I
e Nasalis_larvatus.k141_1382660                              4275  0 +      5784 I
e Colobus_polykomos.k141_1178012                               88  3 -     11758 I
e Colobus_guereza.LG08                                   96946830  0 - 156195979 I
e Colobus_angolensis.KN983490.1                            283936  0 +    886210 I
e Cephalopachus_bancanus.k141_702587                        12545  0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530  0 +    345090 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               18146  6 +    209709 GA------AGA------C
s Acinonyx_jubatus.LLWD01000356.1                         2040948  6 +   3721120 ga------aaa------t
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    118442  6 -    189883 CA------AGa------t
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 I 199
s Ailuropoda_melanoleuca.LNAT01000321.1                  10664891  6 +  23371972 GA------AAA------T
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7101845  6 -  16596857 aa------aaa------t
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_141108                   1831  4 -      7259 --------AGA------T
i Allactaga_bullata.AllBul_scaffold_141108              C 0 I 185
s Allenopithecus_nigroviridis.k141_2469532                   6020  6 -     60446 GA------AGA------C
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         6736  6 -     29318 GA------AGA------C
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         5674  6 +     38766 GA------AGA------C
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          6630  6 -     80423 GA------AGA------C
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              1614  4 +     19852 GA------AG--------
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                3858  4 -     12443 GA------AG--------
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                             1157  4 +      5070 GA------AG--------
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                  902  4 -      1641 GA------AG--------
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          3641  4 -     24210 GA------AG--------
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_494922                              145  4 -      8325 GA------AG--------
i Alouatta_nigerrima.k141_494922                        C 0 C 0
s Alouatta_palliata.k141_405616                              6059  4 +     16794 GA------AG--------
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                            1191  4 -      1470 GA------AG--------
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             5336  4 -      9835 GA------AG--------
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3528088  6 +   4113121 GA------AGC------T
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      394178  3 -    631301 G---------A------T
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             5249  6 +     55446 GA------AGC------T
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 66939  6 +     78111 GA------AGA------C
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            9887  4 +     22701 GA------AG--------
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5753850  6 +   9889416 GA------AGA------C
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                            10449  6 -    104377 GA------AGA------C
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                              10456  6 +     23246 GA------AGA------C
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     3116  6 +     11424 GC------AGA------T
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        7033  6 +      9265 AA------AGA------T
i Arctocebus_calabarensis.k141_587554                   I 3 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                12463  6 -     29036 GA------TGA------T
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9543743  6 +  39197703 GA------AGA------C
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             65017  6 +     85812 GA------AGA------C
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                16030  6 +     89302 GA------AGA------C
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             20531  6 -     58268 GA------AGA------C
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             68525  6 +    119057 GA------AGA------C
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              10494  6 -     25888 GA------AGA------C
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                11556  6 -     16375 GA------AGA------T
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               5172  6 +      6337 GA------AGA------T
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26385469  6 +  51448160 GA------AGA------T
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                       10642  6 -     13118 GA------AGA------T
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   50057  6 -     72089 GA------AGC------T
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   305007  6 -   6870073 GA------AGC------T
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22959112  6 + 161108492 GA------AGC------T
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     421292  6 +    998990 GA------AGC------T
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22667764  6 + 158972876 GA------AGC------T
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               676603  6 +   1914593 GA------AGC------T
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               118392  6 -    171031 GA------AGA------C
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 17412  6 +    125063 GA------AGA------C
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                19459  6 -    216513 GA------AGA------C
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       12002  6 -    134917 GA------AGA------C
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3224578  6 -   8989139 ga------aaa------t
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           402278  6 -  15254737 ga------aaa------t
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2978016  6 +   6889770 ga------aaa------t
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11527754  6 +  39901454 GA------AAA------T
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   22728  6 +     87036 GA------AAA------T
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11274651  6 -  35597290 ga------aaa------t
i Canis_lupus_dingo.QKWQ01001993.1                      I 214 C 0
s Canis_lupus_familiaris.chr31                           11097148  6 +  39895921 ga------aaa------t
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16463933  6 -  44759192 ga------aaa------t
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21335521  6 + 157394656 GA------AGC------T
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135713874  6 - 157403528 GA------AGC------T
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_780116                   127  6 +      1571 AA------AAA------C
i Capromys_pilorides.CapPil_scaffold_780116             C 0 I 6
s Carollia_perspicillata.CarPer_scaffold_4436               63457  6 +     67245 GA------CGA------T
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_1326                      574  6 -    202837 GA------ATG------G
i Castor_canadensis.CasCan_scaffold_1326                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   164320  6 -    276539 GA------GGA------T
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15790263  6 -  24422027 aa------aga------t
i Cavia_aperea.AVPZ01000278.1                           C 0 I 6
s Cavia_porcellus.DS562889.1                             15802202  6 -  24440124 aa------aga------t
i Cavia_porcellus.DS562889.1                            C 0 I 6
s Cavia_tschudii.CavTsc_scaffold_488                       180374  6 +    436027 AA------AGA------T
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 I 6
s Cebus_albifrons.Contig22                               18896119  6 -  29618158 GA------AGA------C
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                12769  6 -     26817 GA------AGA------C
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                17013  6 +     25043 GA------AGA------C
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4369548  6 +   7569818 ga------aga------t
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         9305  6 -      9338 GA------AGA------T
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6559960  6 +   6739814 GA------AGA------C
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      31437  6 +     60454 GA------AGA------C
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          6641  6 -     21101 GA------AGA------C
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         63951  6 -    107033 GA------AGA------C
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        6814  6 -     17608 GA------AGA------C
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          3979  6 +     45019 GA------AGA------C
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           4255  6 +     15177 GA------AGA------C
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          6861  6 +     16677 GA------AGA------C
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           29051  6 +     35983 GA------AGA------C
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11995582  6 +  12117833 GA------AGA------C
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46482558  6 +  46592721 GA------AGA------C
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                        675  6 -     27215 GA------AGA------C
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       6875  6 +     35577 GA------AGA------C
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        6669  6 -     25661 GA------AGA------C
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        6841  6 -     17744 GA------AGA------C
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        26210  6 +     37128 GA------AGA------C
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           5247  6 -      6963 GA------AGG------T
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           63766  6 -     68416 GA------AGA------C
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                           12886  6 +     13308 GA------AGA------C
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                            10055  6 -     18223 GA------AGA------C
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              1793  6 +    188999 GA------AGA------C
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           46092  6 +     57117 GA------AGA------C
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          50772  6 +     54541 GA------AGA------C
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15964963  6 +  43084221 aa------aga------t
i Chinchilla_lanigera.JH721867.1                        C 0 I 2
s Chiropotes_israelita.k141_1189915                         75573  6 +    196370 GA------AGA------C
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          19754  6 +     40510 GA------AGA------C
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15144395  6 -  15256731 GA------AGA------C
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      38859  6 -     53260 GA------AGA------C
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101149418  6 + 101219884 GA------AGA------C
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                19276  2 -     21363 ----------A------T
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           764580  2 +    964067 ----------A------T
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_954668              1501  6 -      1738 AA------ACA------T
i Chrysochloris_asiatica.ChrAsi_scaffold_954668         C 0 C 0
s Condylura_cristata.JH655880.1                          60623580  6 +  78930452 GA------AGA------T
i Condylura_cristata.JH655880.1                         I 2 I 5
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         3973  6 -      5782 GA------TGA------T
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 283225  6 -    399297 CA------TTA------T
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 I 320
s Cricetulus_griseus.LT883672.1                          53035578  6 +  72327488 CA------AGG------T
i Cricetulus_griseus.LT883672.1                         C 0 I 266
s Crocidura_indochinensis.CroInd_scaffold_27484              3475  6 -     22648 GA------GGA------T
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            58960  6 -     70449 GA------AAA------T
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  214848  6 -    956709 GA------AGA------A
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 36513  6 -     67205 AA------AGA------T
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 I 6
s Cuniculus_paca.CunPac_flattened_line_16637                21451  6 +     26546 AA------AGA------T
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 I 6
s Dasyprocta_punctata.DasPun_flattened_line_634             62591  6 -    236241 AC------AGA------T
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 I 6
s Dasypus_novemcinctus.JH568778.1                          186293  6 -   6883506 GA------AGG------T
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16849718  6 +  31942871 GA------AGA------T
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80042066  6 -  96802777 GA------AGA------T
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.PEHR01015603.1                            357  6 +       472 GA------TGA------T
i Desmodus_rotundus.PEHR01015603.1                      C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 327947  6 +    993696 ga------aga------t
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   8581  6 +    151128 GA------AGA------T
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   160435 11 +    228994 AA------AGACAATT-T
i Dinomys_branickii.DinBra_scaffold_1996                C 0 I 2
s Dipodomys_ordii.KN672545.1                              3660884 12 +   4240102 GA------AGATAATTGA
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  3258 12 -     11986 GA------AGATAATTGA
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                41160  6 -     73477 AA------AGG------T
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 I 6
s Echinops_telfairi.JH980316.1                           23000493  6 -  44670279 AA------AGA------T
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.AWHC01235761.1                              3545  6 -      8619 GA------TGA------T
i Eidolon_helvum.AWHC01235761.1                         n 6 I 8
s Elaphurus_davidianus.JRFZ01086400.1                     1498002  6 +   1727528 GA------AGC------T
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7834747  6 +  15467074 GA------TGA------T
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        244391  6 -    369425 CA------AGA------T
i Ellobius_lutescens.LOEQ01003611.1                     C 0 I 198
s Ellobius_talpinus.LOJH01076532.1                            722  6 +      9159 CA------AGA------T
i Ellobius_talpinus.LOJH01076532.1                      C 0 I 211
s Enhydra_lutris.KZ291749.1                              85878892  6 +  99434291 aa------aaa------t
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4710433  6 +   6522550 GA------TGA------T
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5857807  6 -   7175178 ga------aga------t
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13356293  6 +  41866177 ga------aga------t
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          17783  6 +     92910 ga------aga------t
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11542967  6 +  16010500 GA------AGA------T
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48781428  6 -  48907691 GA------AGA------C
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          320313  6 +    330699 GA------AGA------T
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             66769  6 +     89355 GA------AGA------T
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              9862  6 +     13586 GA------AGA------T
i Eulemur_albifrons.k141_715837                         I 41 C 0
s Eulemur_collaris.k141_1015201                              3121  6 -      4292 GA------AGA------T
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            16258  6 +     36558 GA------AGA------T
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            12580  6 +     60246 GA------AGA------T
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                16065  6 +    109717 GA------AGA------T
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 4048  6 -     19505 GA------AGA------T
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                20723  6 +     27497 GA------AGA------T
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           23179  6 +     26808 GA------AGA------T
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                37911  6 +     46535 GA------AGA------T
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              20652  6 -     29447 GA------AGA------T
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.AANG03202589.1                                  414  6 -       609 ga------aaa------t
i Felis_catus.AANG03202589.1                            C 0 C 0
s Felis_catus_fca126.CM031420.1                         129287343  6 - 158578461 ga------aaa------t
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 28446  6 +     52776 GA------AAA------T
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13896732  6 -  19261668 aa------aga------c
i Fukomys_damarensis.KN123630.1                         C 0 I 6
s Galago_moholi.ctg555                                     215885  6 -    847004 AA------AGA------T
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           18246  6 -     43889 AA------AGA------T
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          15390  6 +     27357 AA------AGA------T
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               160160  6 +    324696 GA------AAC------T
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    187782  6 -    189561 GA------AGC------T
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           17061  4 -     18683 GA------AG--------
i Glis_glis.GliGli_scaffold_79770                       C 0 I 5
s Gorilla_beringei.k141_111300                               9844  6 -     14630 GA------AGA------C
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119656944  6 - 195582420 GA------AGA------C
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   80373  6 +    118900 GA------AGA------T
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         6651  6 +     10286 GA------AGA------T
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             5129  6 -     11661 GA------AGA------T
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                            10456  6 +     56096 GA------AGA------T
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        33705  6 -     42470 GA------AGA------T
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        50328  6 -     54384 GA------AGA------T
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              24076  6 +     53719 GA------AAA------T
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                34912  6 -     91191 GA------AAC------T
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2561229  6 +  31725842 AA------AGA------T
i Heterocephalus_glaber.JH602058.1                      C 0 I 6
s Heterohyrax_brucei.HetBruBak_scaffold_25354               63455  6 +     73687 GA------AGA------C
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              152120  6 +    277961 GA------AGA------T
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      285149  6 -    477199 ga------tga------t
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959               2835  6 +     26078 GA------AGA------T
i Hipposideros_galeritus.HipGal_scaffold_52959          C 0 C 0
s Hoolock_leuconedys.ctg79                                      9759  6 -   7690867 GA------AGA------C
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 24516  6 -     67322 GA------AAA------T
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           21827  6 -    119109 AA------AGA------T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 I 6
s Hylobates_abbotti.k141_1816750                             2330  6 +      3202 GA------AGA------C
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1136966                               339  6 +      9785 GA------AGA------C
i Hylobates_agilis.k141_1136966                         C 0 C 0
s Hylobates_klossii.k141_468230                              3819  6 +      5464 GA------AGA------C
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14629165  6 -  25970782 GA------AGA------C
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            1717  6 +      4161 GA------AGA------C
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                    10133  1 +     22540 -----------------A
i Hystrix_cristata.HysCri_scaffold_50788                I 1 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7130960  6 +  13083262 ga------aga------t
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   2174  6 +      3484 GA------AGA------C
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              14293  6 +     17520 TA------AGA------T
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8579571  4 +  11848649 --------AGG------T
i Jaculus_jaculus.JH725517.1                            C 0 I 192
s Kogia_breviceps.KogBre_flattened_line_35920               28928  6 +     37189 GA------AGA------T
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          54614  6 -    147782 GA------AGA------C
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    7000  6 +     26176 GA------TGA------T
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258412006  6 - 285822530 GA------AGA------T
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        29312  6 +     39228 GA------AGA------T
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            58676  6 +     63517 GA------AGA------T
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        37056  6 -     38897 GA------AGA------T
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      3102  6 -     13103 GA------AGA------T
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3092837  6 -   3498232 aa------aaa------t
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lipotes_vexillifer.KE558548.1                            141233  6 +   3060487 GA------AGA------T
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19253049  6 +  19376315 GA------AGA------C
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           15848  6 +     84689 AA------AGA------T
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3783586  6 +   6799190 AA------AGA------T
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20599380  6 -  62548349 GA------AGA------T
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11096604  6 +  39895028 ga------aaa------t
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             24800  6 +     74745 GA------AGA------C
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12711261  6 +  12821369 GA------AGA------C
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                3834  6 -     26467 GA------AGA------C
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           51705  6 +     63263 GA------AGA------C
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 3815  6 -     26361 GA------AGA------C
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 7005  6 -      7381 GA------AGA------C
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  50234  6 -     79256 GA------AGA------C
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196040332  6 + 196197964 GA------AGA------C
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11450502  6 +  11645122 GA------AGA------C
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   9188  6 -     46448 GA------AGA------C
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                6851  6 -     13212 GA------AGA------C
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 20531  6 -     55006 GA------AGA------C
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43845646  6 +  43892939 GA------AGA------C
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               21815  6 -     24607 GA------AGA------C
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               9185  6 -     27140 GA------AGA------C
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                703310  6 +    802869 GA------AGA------A
i Macroglossus_sobrinus.MacSob_scaffold_879             I 802 C 0
s Mandrillus_leucophaeus.scaffold125                     43442221  6 -  43563597 GA------AGA------C
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4455025  6 -   4543643 GA------AGA------C
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            153590  6 +    252755 ga------aac------t
i Manis_javanica.JSZB01003966.1                         C 0 I 5
s Manis_pentadactyla.KN017078.1                             41192  6 +     58827 GA------AAC------T
i Manis_pentadactyla.KN017078.1                         C 0 I 5
s Marmota_marmota.CZRN01000005.1                         36878827  6 +  64221397 ga------aga------t
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       67089  6 -    234502 GA------TGA------T
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             7986  6 -     87323 AA------AAA------T
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 2629  6 +    115071 GA------AGA------T
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 I 192
s Mesocricetus_auratus.KB708139.1                         1052102  6 -  26018355 CA------AGT------T
i Mesocricetus_auratus.KB708139.1                       C 0 I 307
s Mesoplodon_bidens.MesBid_scaffold_96348                    3884  6 -     12939 GA------AGA------T
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16515037  6 +  47401472 AA------AGA------T
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  42061  6 -     48017 AA------AGA------T
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               26411  6 -     32043 GA------TGA------T
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22825189  6 -  98408828 CA------AGA------T
i Microtus_ochrogaster.CM001673.1                       C 0 I 225
s Miniopterus_natalensis.LDJU01000022.1                   8214576  6 +  10048721 GA------TGA------T
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            39034  6 +     45743 GA------TGA------T
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         6767  6 +     29742 GA------AGA------C
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        18333  6 -    104932 AA------AAA------T
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     5720  6 -     12809 AA------AGA------T
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 151659  6 +    154973 GA------AGA------T
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                164927  6 +    265003 GA------TGA------T
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  8461  6 -     19904 gt------CGC------T
i Moschus_moschiferus.MosMos_scaffold_78805             I 71 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  151815  6 -    168139 GA------AAA------T
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          25742  6 -    100666 GA------TGA------T
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70772449  6 +  92629107 ca------aaa------t
i Mus_caroli.LT608236.1                                 C 0 I 204
s Mus_musculus.chr16                                     75494503  6 +  98207768 ca------aaa------t
i Mus_musculus.chr16                                    C 0 I 202
s Mus_pahari.LT608305.1                                  67561257  6 +  89017189 ca------aaa------t
i Mus_pahari.LT608305.1                                 C 0 I 200
s Mus_spretus.CM004110.1                                 74337226  6 +  97876770 ca------aaa------a
i Mus_spretus.CM004110.1                                C 0 I 202
s Muscardinus_avellanarius.MusAve_scaffold_9643             15465  6 +     98495 GA------AGG------T
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4430093  6 -  28371801 aa------aaa------t
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     96230  6 -    117718 AA------AGA------C
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 I 6
s Myotis_brandtii.KE161952.1                               972756  6 +   8389877 GA------TGA------T
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5023832  6 +   6462685 GA------TGA------T
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3470261  6 -   3747815 GA------TGA------T
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        15494  6 +     66751 GA------TGA------T
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             8246  6 -      8794 GG------AGA------T
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            121637  6 +    362372 ca------aga------c
i Nannospalax_galili.KL201303.1                         C 0 I 3515
s Neomonachus_schauinslandi.NINY01007774.1                4491728  6 -  14209539 aa------aaa------t
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3956250  6 -   4490290 GA------AGA------T
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  52241  6 +     94413 GA------CAA------T
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_762468                             836  6 -      2755 GA------AGA------C
i Nomascus_annamensis.k141_762468                       C 0 C 0
s Nomascus_concolor.k141_256540                              7448  6 -      8966 GA------AGA------C
i Nomascus_concolor.k141_256540                         C 0 C 0
s Nomascus_gabriellae.k141_1400361                           1387  6 -      2203 GA------AGA------C
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_453                             6699  6 +     12787 GA------AGA------C
i Nomascus_siki_b.tarseq_453                        C 0 C 0
s Nomascus_siki_a.k141_421408                                  1301  6 +     16235 GA------AGA------C
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                39473  6 +   3668941 ga------aaa------t
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65572511  6 -  95554990 AA------AAA------T
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_6040852                             148  6 +      1868 AA------AAA------T
i Nycticebus_coucang.k141_6040852                       I 54 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65680699  6 +  89412551 AA------aaa------t
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            5000681  6 -  23139505 AA------TGA------T
i Ochotona_princeps.JH802095.1                          I 3 C 0
s Octodon_degus.JH651621.1                                3691567  6 +  10294119 aa------aga------c
i Octodon_degus.JH651621.1                              C 0 I 6
s Odobenus_rosmarus.KB229369.1                             686426  6 -   3126709 aa------aaa------t
i Odobenus_rosmarus.KB229369.1                          I 4 C 0
s Odocoileus_virginianus.KZ101650.1                       1085440  6 +   1425656 GA------AGC------T
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         43505  6 +     78940 GA------AGC------T
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  130977  6 +    145789 CA------AGA------T
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 I 240
s Onychomys_torridus.OnyTor_scaffold_12578                  43871  6 +     62360 CA------AGA------G
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 I 261
s Orcinus_orca.KB316965.1                                 7229931  6 -   7562323 GA------AGA------T
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              64778  6 -     66828 GA------AGA------T
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      316611  6 -    505867 ga------aaa------t
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        5747  6 -     53940 AA------AGA------T
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18013716  6 -  38779656 AA------AGA------T
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134084697  6 - 275406953 GA------AAC------T
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      85935  6 +    140051 GA------AGC------T
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127579123  6 - 205426864 GA------AGA------C
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120156283  6 - 196562556 GA------AGA------C
i Pan_troglodytes.CM009241.2                            I 41 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  41368  6 +    295523 GA------AAA------T
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3645184  6 +  18214204 aa------aaa------t
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5034825  6 -   6340057 ga------aaa------t
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1073567  6 -   1292953 GA------AGC------T
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188161010  6 - 188283584 GA------AGA------C
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              4100  6 +     25005 GA------AGA------C
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47518382  6 +  47705337 GA------AGA------C
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 72373  6 -    104429 GA------AGA------C
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   10905  6 +     14967 GA------AGA------C
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 6770  6 -      7628 GA------AGA------C
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    122838  6 -    135482 GA------AAA------T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          11411  6 -     23713 AA------AGA------T
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           12562  6 +     61070 AA------AGA------T
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       2880 12 +     49596 GA------AGAAAATTGA
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615518.1                       4956040  3 -   8017169 CA------A---------
i Peromyscus_maniculatus.KI615518.1                     C 0 I 3783
s Petromus_typicus.PetTyp_scaffold_33007                    17572  6 -     36578 AA------AGA------T
i Petromus_typicus.PetTyp_scaffold_33007                C 0 I 6
s Phocoena_phocoena.PhoPho_flattened_line_53071              4391  6 +      8220 GA------AGA------T
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306           101010  6 +    112873 GA------TGA------T
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990          10873  6 +     21690 GA------AGA------T
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       26704  6 +     44506 GA------AGA------C
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        26917  6 +     67491 GA------AGA------C
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      17156  6 -     98129 GA------AGA------C
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     26757  6 +    147771 GA------AGA------C
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         3392  6 -     43940 GA------AGA------C
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          7475  6 -     55515 GA------AGA------C
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         26829  6 +    152463 GA------AGA------C
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       4637  6 -    119457 GA------AGA------C
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         16551  6 +    134592 GA------AGA------C
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          27139  6 -     75465 GA------AGA------C
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              191754  6 -    373494 GA------AGA------C
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19812401  6 +  19899266 GA------AGA------C
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                4561  6 -      9567 GA------AGA------C
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6853377  6 +  12164890 GA------AGA------T
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     22186  6 -     30946 NN------NNN------N
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         8464  6 +     11805 GA------AGA------T
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           47798  6 +     52369 GA------AGG------T
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         40185  6 -     44753 GA------AGG------T
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            22108  6 +     27322 GA------AGG------T
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       21757  6 -     53241 GA------AGA------T
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         44020  6 -     48185 GA------AGA------T
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           39606  6 +     77221 GA------AGA------T
i Psammomys_obesus.NESX01026517.1                       C 0 I 192
s Pteronotus_parnellii.KE867983.1                            7579  6 -     27784 AG------AGA------T
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        251736  6 -    344369 AA------AAA------T
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB030474.1                              8976768  6 -  19980961 GG------TGA------T
i Pteropus_alecto.KB030474.1                            C 0 I 8
s Pteropus_vampyrus.KN525959.1                             606332  6 -   3946241 ga------tga------a
i Pteropus_vampyrus.KN525959.1                          I 863 C 0
s Puma_concolor.QAVW01000427.1                          131541303  6 - 161321710 ga------aaa------t
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                22284  6 +     68503 GA------AGC------T
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13918266  6 +  90463843 ca------aga------t
i Rattus_norvegicus.chr11                               C 0 I 138
s Rhinolophus_sinicus.LVEH01000179.1                      1794203  6 +   2252614 Ga------tga------t
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_21814                2840  6 -     44886 GG------TGA------T
i Rousettus_aegyptiacus.RouAeg_scaffold_21814           C 0 I 40
s Saiga_tatarica.SaiTat_scaffold_371890                      2964  6 -      4338 GA------AGC------T
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15677161  6 -  43202129 GA------Aga------c
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        9074  6 +     34089 GA------AGA------C
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              9014  6 -     60842 GA------AGA------C
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              9108  6 +     67014 GA------AGA------C
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              9085  6 +     60816 GA------AGA------C
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 9022  6 -     76454 GA------AGA------C
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17345807  6 -  30362882 GA------AGA------C
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         25128  6 -     62485 GA------AGA------C
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   41014  6 -    114521 GA------AGA------C
i Scalopus_aquaticus.ScaAqu_scaffold_9300               I 2 I 5
s Sigmodon_hispidus.SigHis_scaffold_11332                  106036  6 -    120886 CA------AGA------T
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 I 264
s Solenodon_paradoxus.SolPar_flattened_line_1012            25672  6 +    739146 GA------AGA------T
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17775811  6 -  27805282 GA------ACA------T
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2244661  6 +   2842873 ga------aga------t
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             240510  6 -    276980 AA------AAA------T
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            34705  6 +     62062 GA------AAA------T
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189276712  6 + 218635234 GG------AGG------T
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        19424  6 -  13920577 GA------AGA------C
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                3827  6 +     20549 GA------TGA------T
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               17920  6 +     45698 GG------AGA------T
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      812289  6 +   1148477 AA------AGA------T
i Tapirus_indicus.TapInd_scaffold_176                   C 0 I 1
s Tapirus_terrestris.TapTer_scaffold_14939                  62932  6 +     99546 GA------AGA------T
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 I 1
s Theropithecus_gelada.CM009951.1                       194012543  6 - 194193292 GA------AGA------C
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                  1093  6 -      3104 GA------AGG------T
i Tolypeutes_matacus.TolMat_scaffold_475685             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  139588  6 -    259118 GT------TGG------T
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 I 1
s Tragulus_javanicus.TraJav_scaffold_14717                  10272  6 +     90398 GA------AGA------T
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16090451  6 +  31416278 GA------AGA------G
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2801724  6 -   3938065 GA------ACA------T
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                   10547  6 +     13056 GA------ACA------T
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69318661  6 -  96451834 GA------AGA------T
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                    1402  6 +    136657 GA------AGA------T
i Uropsilus_gracilis.UroGra_scaffold_4115               I 2 I 5
s Ursus_maritimus.KK498671.1                              6522159  6 +  28682327 GA------AAA------T
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                 10023  6 -     20643 GA------AGA------T
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             29558  6 -     33872 GA------AGA------T
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1529686  6 -   2331223 ga------aaa------t
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                145838  6 -    281493 GA------AAA------T
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       132156  6 -    134049 GA------AGA------T
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        221286  6 -    227762 AA------AAA------T
i Zalophus_californianus.ZalCal_flattened_line_4097     I 4 C 0
s Zapus_hudsonius.ZapHud_scaffold_202118                     1649 11 -      3360 -AAGGTATCCA------T
i Zapus_hudsonius.ZapHud_scaffold_202118                I 10 I 189
s Ziphius_cavirostris.ZipCav_flattened_line_60625            3246  6 -     13665 GA------AGA------T
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Oryctolagus_cuniculus.CM000803.1                      141884639  0 + 163896628 C
e Lepus_americanus.LepAme_scaffold_62849                    21623  0 +     22452 C
e Hylobates_pileatus_a.tarseq_592                             37267 2881 -     60944 I
e Trachypithecus_pileatus.k141_532233                       30126  0 -     40754 I
e Trachypithecus_phayrei.ctg364                            232455  0 -   1198723 I
e Trachypithecus_obscurus.k141_411399                         131  0 +     12010 I
e Trachypithecus_melamera.k141_950981                        2232  0 -      3512 I
e Trachypithecus_leucocephalus.k141_352489                   1214  0 +      9423 I
e Trachypithecus_laotum.k141_897381                         45646  0 -     53586 I
e Trachypithecus_hatinhensis.k141_641377                     1240  0 +      1365 I
e Trachypithecus_germaini.k141_240878                        5067  3 -     24955 I
e Trachypithecus_geei.k141_137495                           30106  0 -     42322 I
e Trachypithecus_francoisi.k141_1012484                       874  0 +      8809 I
e Trachypithecus_cristatus.k141_968903                      32589  3 +     43409 I
e Trachypithecus_crepusculus.k141_863597                     4944  0 -     23436 I
e Trachypithecus_auratus.k141_672638                         4947  3 +     38635 I
e Tarsius_wallacei.k141_48636                               64696  0 +     65473 C
e Tarsius_lariang.k141_609102                               31387  0 +     42269 C
e Semnopithecus_vetulus.k141_748269                          4706  0 +     17284 I
e Semnopithecus_schistaceus.k141_628310                     45652  0 -     53123 I
e Semnopithecus_priam.k141_368201                           10107  0 -     20692 I
e Semnopithecus_johnii.k141_1300894                          1368  0 +     13764 I
e Semnopithecus_hypoleucos.k141_2141024                      1351  0 -      8815 I
e Semnopithecus_entellus.k141_1743075                       45578  0 +     45790 I
e Rhinopithecus_strykeri.ctg241                            462135  0 +   1472273 I
e Rhinopithecus_bieti.k119_554384                            2917  0 -     17045 C
e Pygathrix_nigripes_a.k141_758202                             3050  0 -      8240 I
e Pygathrix_nigripes_b.ctg25                                14340869  0 -  15297009 I
e Pygathrix_cinerea.k141_951151                              3033  0 -      8225 I
e Presbytis_mitrata.k141_1767317                            10996  0 +     15869 I
e Presbytis_comata.k141_678168                              11007  0 +     11126 I
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000342.1                3428480  0 -   4356645 I
e Piliocolobus_kirkii.k141_451083                            4879  0 -     13367 I
e Piliocolobus_gordonorum.k141_736355                       29715  0 +     67079 I
e Piliocolobus_badius.k141_512007                           29798  0 +     37672 I
e Nasalis_larvatus.k141_1382660                              4275  0 +      5784 I
e Colobus_polykomos.k141_1178012                               88  3 -     11758 I
e Colobus_guereza.LG08                                   96946830  0 - 156195979 I
e Colobus_angolensis.KN983490.1                            283936  0 +    886210 I
e Cephalopachus_bancanus.k141_702587                        12545  0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530  0 +    345090 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               18152 4 +    209709 A-aaa
s Acinonyx_jubatus.LLWD01000356.1                         2040954 2 +   3721120 a-a--
i Acinonyx_jubatus.LLWD01000356.1                       C 0 I 1
s Acomys_cahirinus.AcoCah_scaffold_1625                    118647 2 -    189883 A-A--
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 199 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10664897 2 +  23371972 G-A--
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 I 1
s Ailurus_fulgens.LNAC01000003.1                          7101851 2 -  16596857 a-a--
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_141108                   2020 2 -      7259 A-A--
i Allactaga_bullata.AllBul_scaffold_141108              I 185 C 0
s Allenopithecus_nigroviridis.k141_2469532                   6026 4 -     60446 A-AAC
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         6742 4 -     29318 A-AAC
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         5680 4 +     38766 A-AAC
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          6636 4 -     80423 A-AAC
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              1618 2 +     19852 ---AC
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                3862 2 -     12443 ---AC
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                             1161 2 +      5070 ---AC
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                  906 2 -      1641 ---AC
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          3645 2 -     24210 ---AC
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_494922                              149 2 -      8325 ---AC
i Alouatta_nigerrima.k141_494922                        C 0 C 0
s Alouatta_palliata.k141_405616                              6063 2 +     16794 ---AC
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                            1195 2 -      1470 ---AC
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             5340 2 -      9835 ---AC
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3528094 2 +   4113121 G-A--
i Ammotragus_lervia.NIVO01013474.1                      C 0 I 1
s Anoura_caudifer.AnoCau_scaffold_422                      394181 2 -    631301 A-A--
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 I 1
s Antilocapra_americana.AntAmePen_scaffold_27338             5255 2 +     55446 A-A--
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 I 1
s Aotus_azarae.k141_3170768                                 66945 4 +     78111 A-AAC
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            9891 2 +     22701 ---AC
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5753856 4 +   9889416 A-AAC
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                            10455 4 -    104377 A-AAC
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                              10462 4 +     23246 A-AAC
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     3122 2 +     11424 A-A--
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 I 5
s Arctocebus_calabarensis.k141_587554                        7039 4 +      9265 A-AAT
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                12469 2 -     29036 A-A--
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 I 1
s Ateles_geoffroyi_b.tarseq_2582                             9543749 4 +  39197703 A-AAC
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             65023 4 +     85812 A-AAC
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                16036 4 +     89302 A-AAC
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             20537 4 -     58268 A-AAC
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             68531 4 +    119057 A-AAC
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              10500 4 -     25888 A-AAC
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                11562 4 -     16375 A-AAT
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               5178 4 +      6337 A-AAT
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26385475 2 +  51448160 A-A--
i Balaenoptera_acutorostrata.KI537095.1                 C 0 I 1
s Balaenoptera_bonaerensis.DF502048.1                       10648 2 -     13118 A-A--
i Balaenoptera_bonaerensis.DF502048.1                   C 0 I 1
s Beatragus_hunteri.BeaHun_scaffold_21644                   50063 2 -     72089 A-A--
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 I 1
s Bison_bison.KN264915.1                                   305013 2 -   6870073 A-A--
i Bison_bison.KN264915.1                                C 0 I 1
s Bos_indicus.CM003021.1                                 22959118 2 + 161108492 A-A--
i Bos_indicus.CM003021.1                                C 0 I 1
s Bos_mutus.JH883513.1                                     421298 2 +    998990 A-A--
i Bos_mutus.JH883513.1                                  C 0 I 1
s Bos_taurus.CM000177.6                                  22667770 2 + 158972876 A-A--
i Bos_taurus.CM000177.6                                 C 0 I 1
s Bubalus_bubalis.KI419065.1                               676609 2 +   1914593 A-A--
i Bubalus_bubalis.KI419065.1                            C 0 I 1
s Cacajao_ayresi.k141_724503                               118398 4 -    171031 A-AAC
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 17418 4 +    125063 A-AAC
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                19465 4 -    216513 A-AAC
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       12008 4 -    134917 A-AAC
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3224584 2 -   8989139 a-a--
i Camelus_bactrianus.KN276303.1                         C 0 I 6
s Camelus_dromedarius.KN271192.1                           402284 2 -  15254737 a-a--
i Camelus_dromedarius.KN271192.1                        C 0 I 6
s Camelus_ferus.KB016973.1                                2978022 2 +   6889770 a-a--
i Camelus_ferus.KB016973.1                              C 0 I 6
s CanFam4.chr31                                          11527760 2 +  39901454 A-A--
i CanFam4.chr31                                         C 0 I 1
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   22734 2 +     87036 A-A--
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 I 1
s Canis_lupus_dingo.QKWQ01001993.1                       11274657 2 -  35597290 a-a--
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 I 1
s Canis_lupus_familiaris.chr31                           11097154 2 +  39895921 a-a--
i Canis_lupus_familiaris.chr31                          C 0 I 1
s Canis_lupus_orion.HG994411.1                           16463939 2 -  44759192 a-a--
i Canis_lupus_orion.HG994411.1                          C 0 I 1
s Capra_aegagrus.CM003214.1                              21335527 2 + 157394656 A-A--
i Capra_aegagrus.CM003214.1                             C 0 I 1
s Capra_hircus.CM004562.1                               135713880 2 - 157403528 A-A--
i Capra_hircus.CM004562.1                               C 0 I 1
s Capromys_pilorides.CapPil_scaffold_780116                   139 2 +      1571 A-A--
i Capromys_pilorides.CapPil_scaffold_780116             I 6 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               63463 2 +     67245 A-A--
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 I 1
s Castor_canadensis.CasCan_scaffold_1326                      580 2 -    202837 A-A--
i Castor_canadensis.CasCan_scaffold_1326                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   164326 1 -    276539 A----
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15790275 2 -  24422027 a-a--
i Cavia_aperea.AVPZ01000278.1                           I 6 C 0
s Cavia_porcellus.DS562889.1                             15802214 2 -  24440124 a-a--
i Cavia_porcellus.DS562889.1                            I 6 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       180386 2 +    436027 A-A--
i Cavia_tschudii.CavTsc_scaffold_488                    I 6 C 0
s Cebus_albifrons.Contig22                               18896125 4 -  29618158 A-AAC
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                12775 4 -     26817 A-AAC
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                17019 4 +     25043 A-AAC
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4369554 2 +   7569818 a-a--
i Ceratotherium_simum.JH767818.1                        C 0 I 6
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         9311 2 -      9338 A-A--
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 I 6
s Cercocebus_atys.KQ010443.1                              6559966 4 +   6739814 A-AAC
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      31443 4 +     60454 A-AAC
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          6647 4 -     21101 A-AAC
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         63957 4 -    107033 A-AAC
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        6820 4 -     17608 A-AAC
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          3985 4 +     45019 A-AAC
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           4261 4 +     15177 A-AAC
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          6867 4 +     16677 A-AAC
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           29057 4 +     35983 A-AAC
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11995588 4 +  12117833 A-AAC
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46482564 4 +  46592721 A-AAC
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                        681 4 -     27215 A-AAC
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       6881 4 +     35577 A-AAC
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        6675 4 -     25661 A-AAC
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        6847 4 -     17744 A-AAC
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        26216 4 +     37128 A-AAC
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           5253 4 -      6963 A-AAT
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 I 10
s Cheirogaleus_major.k141_1157592                           63772 4 -     68416 A-AAT
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                           12892 4 +     13308 A-AAT
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                            10061 4 -     18223 A-AAC
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              1799 4 +    188999 A-AAC
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           46098 4 +     57117 A-AAC
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          50778 4 +     54541 A-AAC
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15964971 1 +  43084221 --a--
i Chinchilla_lanigera.JH721867.1                        I 2 C 0
s Chiropotes_israelita.k141_1189915                         75579 4 +    196370 A-AAC
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          19760 4 +     40510 A-AAC
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15144401 4 -  15256731 A-AAC
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      38865 4 -     53260 A-AAC
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101149424 4 + 101219884 A-AAC
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                19278 4 -     21363 A-AAC
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           764582 4 +    964067 A-AAC
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_954668              1507 4 -      1738 A-AAT
i Chrysochloris_asiatica.ChrAsi_scaffold_954668         C 0 C 0
s Condylura_cristata.JH655880.1                          60623591 2 +  78930452 A-A--
i Condylura_cristata.JH655880.1                         I 5 I 1
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         3979 2 -      5782 A-A--
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 I 6
s Cricetomys_gambianus.CriGam_scaffold_949                 283551 2 -    399297 a-a--
i Cricetomys_gambianus.CriGam_scaffold_949              I 320 C 0
s Cricetulus_griseus.LT883672.1                          53035850 2 +  72327488 a-a--
i Cricetulus_griseus.LT883672.1                         I 266 I 2
s Crocidura_indochinensis.CroInd_scaffold_27484              3481 2 -     22648 A-A--
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 I 1
s Cryptoprocta_ferox.CryFer_flattened_line_19014            58966 2 -     70449 A-A--
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 I 1
s Ctenodactylus_gundi.CteGun_scaffold_447                  214854 2 -    956709 A-A--
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 36525 2 -     67205 A-A--
i Ctenomys_sociabilis.CteSoc_scaffold_19489             I 6 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                21463 2 +     26546 T-A--
i Cuniculus_paca.CunPac_flattened_line_16637            I 6 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             62603 2 -    236241 A-A--
i Dasyprocta_punctata.DasPun_flattened_line_634         I 6 C 0
s Dasypus_novemcinctus.JH568778.1                          186299 4 -   6883506 A-AAC
i Dasypus_novemcinctus.JH568778.1                       C 0 I 10
s Daubentonia_madagascariensis.ctg11                     16849724 4 +  31942871 A-AAT
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80042072 2 -  96802777 A-A--
i Delphinapterus_leucas.KZ290064.1                      C 0 I 1
s Desmodus_rotundus.PEHR01015603.1                            363 2 +       472 A-A--
i Desmodus_rotundus.PEHR01015603.1                      C 0 I 1
s Dicerorhinus_sumatrensis.PEKH010003161.1                 327953 2 +    993696 a-a--
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 I 6
s Diceros_bicornis.DicBicMic_scaffold_9545                   8587 2 +    151128 A-A--
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 I 6
s Dinomys_branickii.DinBra_scaffold_1996                   160448 1 +    228994 --A--
i Dinomys_branickii.DinBra_scaffold_1996                I 2 C 0
s Dipodomys_ordii.KN672545.1                              3660896 3 +   4240102 AAA--
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  3270 3 -     11986 AAA--
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                41172 2 -     73477 A-A--
i Dolichotis_patagonum.DolPat_scaffold_14102            I 6 C 0
s Echinops_telfairi.JH980316.1                           23000499 4 -  44670279 A-AAT
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 14677 2 +     24177 a-a--
i Eidolon_helvum.KE772537.1                             I 6 I 193
s Elaphurus_davidianus.JRFZ01086400.1                     1498008 2 +   1727528 A-A--
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 I 1
s Elephantulus_edwardii.JH947210.1                        7834753 4 +  15467074 A-AAC
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        244595 2 -    369425 A-A--
i Ellobius_lutescens.LOEQ01003611.1                     I 198 C 0
s Ellobius_talpinus.LOJH01076532.1                            939 2 +      9159 A-A--
i Ellobius_talpinus.LOJH01076532.1                      I 211 C 0
s Enhydra_lutris.KZ291749.1                              85878898 2 +  99434291 a-a--
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4710439 2 +   6522550 A-A--
i Eptesicus_fuscus.JH977687.1                           C 0 I 6
s Equus_asinus.JREZ01000062.1                             5857813 2 -   7175178 a-a--
i Equus_asinus.JREZ01000062.1                           C 0 I 6
s Equus_caballus.CM000402.2                              13356299 2 +  41866177 a-a--
i Equus_caballus.CM000402.2                             C 0 I 6
s Equus_przewalskii.ATBW01073585.1                          17789 2 +     92910 a-a--
i Equus_przewalskii.ATBW01073585.1                      C 0 I 6
s Erinaceus_europaeus.JH835290.1                         11542973 2 +  16010500 A-A--
i Erinaceus_europaeus.JH835290.1                        C 0 I 1
s Erythrocebus_patas.Contig8                             48781434 4 -  48907691 A-AAC
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          320319 2 +    330699 A-A--
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 I 1
s Eubalaena_japonica.EubJap_flattened_line_7756             66775 2 +     89355 A-A--
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 I 1
s Eulemur_albifrons.k141_715837                              9868 4 +     13586 A-AAT
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_1015201                              3127 4 -      4292 A-AAT
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            16264 4 +     36558 A-AAT
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            12586 4 +     60246 A-AAT
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                16071 4 +    109717 A-AAT
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 4054 4 -     19505 A-AAT
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                20729 4 +     27497 A-AAT
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           23185 4 +     26808 A-AAT
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                37917 4 +     46535 A-AAT
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              20658 4 -     29447 A-AAT
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.AANG03202589.1                                  420 2 -       609 a-a--
i Felis_catus.AANG03202589.1                            C 0 I 1
s Felis_catus_fca126.CM031420.1                         129287349 2 - 158578461 a-a--
i Felis_catus_fca126.CM031420.1                         C 0 I 1
s Felis_nigripes.FelNig_flattened_line_8080                 28452 2 +     52776 A-A--
i Felis_nigripes.FelNig_flattened_line_8080             C 0 I 1
s Fukomys_damarensis.KN123630.1                          13896744 2 -  19261668 a-a--
i Fukomys_damarensis.KN123630.1                         I 6 C 0
s Galago_moholi.ctg555                                     215891 4 -    847004 A-AAT
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           18252 4 -     43889 A-AAT
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          15396 4 +     27357 A-AAT
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               160166 4 +    324696 A-AGT
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    187788 2 -    189561 A-A--
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 I 1
s Gorilla_beringei.k141_111300                               9850 4 -     14630 A-AAC
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119656950 4 - 195582420 A-AAC
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   80379 2 +    118900 A-A--
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 I 5
s Hapalemur_alaotrensis.k141_1280836                         6657 4 +     10286 A-AAT
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             5135 4 -     11661 A-AAT
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                            10462 4 +     56096 A-AAT
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        33711 4 -     42470 A-AAT
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        50334 4 -     54384 A-AAT
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              24082 2 +     53719 A-A--
i Helogale_parvula.HelPar_flattened_line_22962          C 0 I 1
s Hemitragus_hylocrius.HemHyl_scaffold_16669                34918 2 -     91191 A-A--
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 I 1
s Heterocephalus_glaber.JH602058.1                        2561241 2 +  31725842 A-G--
i Heterocephalus_glaber.JH602058.1                      I 6 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               63461 4 +     73687 A-AAT
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              152126 2 +    277961 A-A--
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 I 1
s Hipposideros_armiger.JXIK01001085.1                      285155 2 -    477199 a-a--
i Hipposideros_armiger.JXIK01001085.1                   C 0 I 6
s Hipposideros_galeritus.HipGal_scaffold_52959               2841 2 +     26078 A-A--
i Hipposideros_galeritus.HipGal_scaffold_52959          C 0 I 6
s Hoolock_leuconedys.ctg79                                      9765 3 -   7690867 A-AA-
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 24522 2 -     67322 T-A--
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 I 1
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           21839 2 -    119109 A-A--
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       I 6 C 0
s Hylobates_abbotti.k141_1816750                             2336 3 +      3202 A-AA-
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1136966                               345 3 +      9785 A-AA-
i Hylobates_agilis.k141_1136966                         C 0 C 0
s Hylobates_klossii.k141_468230                              3825 3 +      5464 A-AA-
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14629171 3 -  25970782 A-AA-
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            1723 3 +      4161 A-AA-
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                    10134 2 +     22540 A-A--
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7130966 2 +  13083262 a-a--
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 I 5
s Indri_indri.k141_2197838                                   2180 4 +      3484 A-AAT
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              14299 2 +     17520 A-A--
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 I 1
s Jaculus_jaculus.JH725517.1                              8579767 2 +  11848649 a-A--
i Jaculus_jaculus.JH725517.1                            I 192 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               28934 2 +     37189 A-A--
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 I 1
s Lagothrix_lagothricha.k141_12968                          54620 4 -    147782 A-AAC
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    7006 2 +     26176 A-A--
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 I 6
s Lemur_catta.scaffold_1                                258412012 4 - 285822530 A-AAT
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        29318 4 +     39228 A-AAT
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            58682 4 +     63517 A-AAT
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        37062 4 -     38897 A-AAT
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      3108 4 -     13103 A-AAT
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3092843 2 -   3498232 a-a--
i Leptonychotes_weddellii.KB714749.1                    C 0 I 1
s Lipotes_vexillifer.KE558548.1                            141239 2 +   3060487 A-A--
i Lipotes_vexillifer.KE558548.1                         C 0 I 1
s Lophocebus_aterrimus.ctg55                             19253055 4 +  19376315 A-AAC
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           15854 4 +     84689 A-AAT
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3783592 4 +   6799190 A-AAT
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20599386 4 -  62548349 G-TAT
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11096610 2 +  39895028 a-a--
i Lycaon_pictus.CM007556.1                              C 0 I 1
s Macaca_arctoides.k141_2201161                             24806 4 +     74745 A-AAC
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12711267 4 +  12821369 A-AAC
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                3840 4 -     26467 A-AAC
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           51711 4 +     63263 A-AAC
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 3821 4 -     26361 A-AAC
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 7011 4 -      7381 A-AAC
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  50240 4 -     79256 A-AAC
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196040338 4 + 196197964 A-AAC
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11450508 4 +  11645122 A-AAC
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   9194 4 -     46448 A-AAC
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                6857 4 -     13212 A-AAC
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 20537 4 -     55006 A-AAC
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43845652 4 +  43892939 A-AAC
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               21821 4 -     24607 A-AAC
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               9191 4 -     27140 A-AAC
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                703316 2 +    802869 A-A--
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 I 7
s Mandrillus_leucophaeus.scaffold125                     43442227 4 -  43563597 A-AAC
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4455031 4 -   4543643 A-AAC
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            153601 2 +    252755 a-a--
i Manis_javanica.JSZB01003966.1                         I 5 I 1
s Manis_pentadactyla.KN017078.1                             41203 2 +     58827 A-A--
i Manis_pentadactyla.KN017078.1                         I 5 I 1
s Marmota_marmota.CZRN01000005.1                         36878833 2 +  64221397 a-a--
i Marmota_marmota.CZRN01000005.1                        C 0 I 5
s Megaderma_lyra.MegLyr_scaffold_3562                       67095 2 -    234502 A-A--
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 I 5
s Mellivora_capensis.MelCap_flattened_line_15433             7992 2 -     87323 A-A--
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 2827 2 +    115071 A-A--
i Meriones_unguiculatus.MerUng_scaffold_9483            I 192 C 0
s Mesocricetus_auratus.KB708139.1                         1052415 2 -  26018355 a-a--
i Mesocricetus_auratus.KB708139.1                       I 307 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    3890 2 -     12939 A-A--
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 I 1
s Microcebus_murinus.CM007691.1                          16515043 4 +  47401472 A-AAT
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  42067 4 -     48017 A-AAT
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               26417 2 -     32043 A-A--
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 I 1
s Microtus_ochrogaster.CM001673.1                        22825420 2 -  98408828 A-A--
i Microtus_ochrogaster.CM001673.1                       I 225 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8214582 2 +  10048721 A-A--
i Miniopterus_natalensis.LDJU01000022.1                 C 0 I 6
s Miniopterus_schreibersii.MinSch_scaffold_24116            39040 2 +     45743 A-A--
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 I 6
s Miopithecus_ogouensis.k141_2935907                         6773 4 +     29742 A-AAC
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        18339 2 -    104932 A-A--
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 I 1
s Mirza_zaza.k141_593947                                     5726 4 -     12809 A-AAT
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 151665 2 +    154973 A-A--
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 I 1
s Mormoops_blainvillei.MorMeg_scaffold_2952                164933 2 +    265003 A-A--
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 I 1
s Moschus_moschiferus.MosMos_scaffold_78805                  8467 2 -     19904 A-A--
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 I 1
s Mungos_mungo.MunMun_flattened_line_8729                  151821 2 -    168139 A-A--
i Mungos_mungo.MunMun_flattened_line_8729               C 0 I 1
s Murina_feae.MurFea_scaffold_2254                          25748 2 -    100666 A-A--
i Murina_feae.MurFea_scaffold_2254                      C 0 I 6
s Mus_caroli.LT608236.1                                  70772659 2 +  92629107 a-a--
i Mus_caroli.LT608236.1                                 I 204 C 0
s Mus_musculus.chr16                                     75494711 2 +  98207768 A-A--
i Mus_musculus.chr16                                    I 202 C 0
s Mus_pahari.LT608305.1                                  67561463 2 +  89017189 a-A--
i Mus_pahari.LT608305.1                                 I 200 C 0
s Mus_spretus.CM004110.1                                 74337434 2 +  97876770 A-A--
i Mus_spretus.CM004110.1                                I 202 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             15471 2 +     98495 G-A--
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 I 5
s Mustela_putorius.JH417978.1                             4430099 2 -  28371801 a-a--
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     96242 2 -    117718 A-A--
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 6 C 0
s Myotis_brandtii.KE161952.1                               972762 2 +   8389877 A-A--
i Myotis_brandtii.KE161952.1                            C 0 I 6
s Myotis_davidii.KB114863.1                               5023838 2 +   6462685 A-A--
i Myotis_davidii.KB114863.1                             C 0 I 6
s Myotis_lucifugus.GL429887.1                             3470267 2 -   3747815 A-A--
i Myotis_lucifugus.GL429887.1                           C 0 I 6
s Myotis_myotis.MyoMyo_scaffold_6123                        15500 2 +     66751 A-A--
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 I 6
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             8252 4 -      8794 A-AAT
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            125158 2 +    362372 a-a--
i Nannospalax_galili.KL201303.1                         I 3515 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4491734 2 -  14209539 a-a--
i Neomonachus_schauinslandi.NINY01007774.1              C 0 I 1
s Neophocaena_asiaeorientalis.KZ688543.1                  3956256 2 -   4490290 A-A--
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 I 1
s Noctilio_leporinus.NocLep_scaffold_12062                  52247 2 +     94413 A-A--
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 I 1
s Nomascus_annamensis.k141_762468                             842 3 -      2755 A-AA-
i Nomascus_annamensis.k141_762468                       C 0 C 0
s Nomascus_concolor.k141_256540                              7454 3 -      8966 A-AA-
i Nomascus_concolor.k141_256540                         C 0 C 0
s Nomascus_gabriellae.k141_1400361                           1393 3 -      2203 A-AA-
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_453                             6705 3 +     12787 A-AA-
i Nomascus_siki_b.tarseq_453                        C 0 C 0
s Nomascus_siki_a.k141_421408                                  1307 3 +     16235 A-AA-
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                39479 2 +   3668941 a-a--
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 I 1
s Nycticebus_bengalensis.LG16                            65572517 4 -  95554990 A-AAT
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_6040852                             154 4 +      1868 A-AAT
i Nycticebus_coucang.k141_6040852                       C 0 I 2
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65680705 4 +  89412551 a-aat
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            5000687 4 -  23139505 A-GAT
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3691579 2 +  10294119 a-a--
i Octodon_degus.JH651621.1                              I 6 C 0
s Odobenus_rosmarus.KB229369.1                             686432 2 -   3126709 a-a--
i Odobenus_rosmarus.KB229369.1                          C 0 I 1
s Odocoileus_virginianus.KZ101650.1                       1085446 2 +   1425656 A-A--
i Odocoileus_virginianus.KZ101650.1                     C 0 I 1
s Okapia_johnstoni.LVCL01S0017931.1                         43511 2 +     78940 A-A--
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 I 1
s Ondatra_zibethicus.OndZib_scaffold_6821                  131223 2 +    145789 a-a--
i Ondatra_zibethicus.OndZib_scaffold_6821               I 240 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  44138 2 +     62360 A-A--
i Onychomys_torridus.OnyTor_scaffold_12578              I 261 C 0
s Orcinus_orca.KB316965.1                                 7229937 2 -   7562323 A-A--
i Orcinus_orca.KB316965.1                               C 0 I 1
s Orycteropus_afer.OryAfe_flattened_line_13509              64784 4 -     66828 A-AAT
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      316617 2 -    505867 a-a--
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 I 1
s Otolemur_crassicaudatus.k141_505435                        5753 4 -     53940 A-AAT
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18013722 4 -  38779656 A-AAT
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134084703 2 - 275406953 A-A--
i Ovis_aries.CM001582.2                                 C 0 I 1
s Ovis_canadensis.OviCan_scaffold_6251                      85941 2 +    140051 A-A--
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 I 1
s Pan_paniscus.CM003386.1                               127579129 4 - 205426864 A-AAC
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120156289 4 - 196562556 A-AAC
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  41374 2 +    295523 A-A--
i Panthera_onca.PanOnc_flattened_line_1615              C 0 I 1
s Panthera_pardus.KV860323.1                              3645190 2 +  18214204 a-a--
i Panthera_pardus.KV860323.1                            C 0 I 1
s Panthera_tigris.KE721879.1                              5034831 2 -   6340057 a-a--
i Panthera_tigris.KE721879.1                            C 0 I 1
s Pantholops_hodgsonii.KE114631.1                         1073573 2 -   1292953 A-A--
i Pantholops_hodgsonii.KE114631.1                       C 0 I 1
s Papio_anubis.CM001492.2                               188161016 4 - 188283584 A-AAC
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              4106 4 +     25005 A-AAC
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47518388 4 +  47705337 A-AAC
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 72379 4 -    104429 A-AAC
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   10911 4 +     14967 A-AAC
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 6776 4 -      7628 A-AAC
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    122844 2 -    135482 A-A--
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 I 1
s Perodicticus_ibeanus.k141_117958                          11417 4 -     23713 A-AAT
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           12568 4 +     61070 A-AAT
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       2892 2 +     49596 A-A--
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615458.1                       2840005 2 -   3366660 A-A--
i Peromyscus_maniculatus.KI615458.1                     n 3783 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    17584 2 -     36578 A-A--
i Petromus_typicus.PetTyp_scaffold_33007                I 6 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              4397 2 +      8220 A-A--
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 I 1
s Pipistrellus_pipistrellus.PipPip_scaffold_3306           101016 2 +    112873 A-A--
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 I 6
s Platanista_gangetica.PlaMin_flattened_line_72990          10879 2 +     21690 A-A--
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 I 1
s Plecturocebus_bernhardi.k141_959214                       26710 4 +     44506 A-AAC
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        26923 4 +     67491 A-AAC
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      17162 4 -     98129 A-AAC
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     26763 4 +    147771 A-AAC
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         3398 4 -     43940 A-AAC
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          7481 4 -     55515 A-AAC
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         26835 4 +    152463 A-AAC
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       4643 4 -    119457 A-AAC
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         16557 4 +    134592 A-AAC
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          27145 4 -     75465 A-AAC
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              191760 4 -    373494 A-AAC
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19812407 4 +  19899266 A-AAC
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                4567 4 -      9567 A-AAT
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6853383 4 +  12164890 A-AAT
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     22192 4 -     30946 N-NNN
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         8470 4 +     11805 A-AAT
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           47804 4 +     52369 A-AAT
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         40191 4 -     44753 A-AAT
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            22114 4 +     27322 A-AAT
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       21763 4 -     53241 A-AAT
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         44026 4 -     48185 A-AAT
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           39804 2 +     77221 a-a--
i Psammomys_obesus.NESX01026517.1                       I 192 C 0
s Pteronotus_parnellii.KE867983.1                            7585 2 -     27784 A-A--
i Pteronotus_parnellii.KE867983.1                       C 0 I 1
s Pteronura_brasiliensis.PteBra_flattened_line_1343        251742 2 -    344369 A-A--
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13248388 2 -  17261082 a-a--
i Pteropus_alecto.KB031157.1                            I 869 I 7
s Pteropus_vampyrus.KN525959.1                             606338 2 -   3946241 a-a--
i Pteropus_vampyrus.KN525959.1                          C 0 I 6
s Puma_concolor.QAVW01000427.1                          131541309 2 - 161321710 a-a--
i Puma_concolor.QAVW01000427.1                          C 0 I 1
s Rangifer_tarandus.RanTarSib_scaffold_24239                22290 2 +     68503 A-A--
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 I 1
s Rattus_norvegicus.chr11                                13918410 2 +  90463843 A-A--
i Rattus_norvegicus.chr11                               I 138 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1794209 2 +   2252614 t-a--
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 I 6
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                21734 2 +    109198 A-A--
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            I 881 I 6
s Saiga_tatarica.SaiTat_scaffold_371890                      2970 2 -      4338 A-A--
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 I 1
s Saimiri_boliviensis.NW_024100938.1                     15677167 4 -  43202129 a-aac
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        9080 4 +     34089 A-AAC
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              9020 4 -     60842 A-AAC
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              9114 4 +     67014 A-AAC
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              9091 4 +     60816 A-AAC
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 9028 4 -     76454 A-AAC
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17345813 4 -  30362882 A-AAC
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         25134 4 -     62485 A-AAC
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   41025 2 -    114521 A-A--
i Scalopus_aquaticus.ScaAqu_scaffold_9300               I 5 I 1
s Sigmodon_hispidus.SigHis_scaffold_11332                  106306 2 -    120886 a-a--
i Sigmodon_hispidus.SigHis_scaffold_11332               I 264 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            25678 2 +    739146 A-A--
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 I 1
s Sorex_araneus.JH798170.1                               17775817 2 -  27805282 A-A--
i Sorex_araneus.JH798170.1                              C 0 I 1
s Spermophilus_dauricus.KZ294190.1                        2244667 2 +   2842873 a-a--
i Spermophilus_dauricus.KZ294190.1                      C 0 I 5
s Spilogale_gracilis.SpiGra_flattened_line_905             240516 2 -    276980 A-A--
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 I 1
s Suricata_suricatta.SurSur_flattened_line_20339            34711 2 +     62062 A-A--
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 I 1
s Sus_scrofa.CM000824.4                                 189276718 1 + 218635234 A----
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        19430 3 -  13920577 A-AA-
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                3833 2 +     20549 A-A--
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 I 6
s Tamandua_tetradactyla.TamTet_scaffold_26877               17926 4 +     45698 A-AAT
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194012549 4 - 194193292 A-AAC
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                  1099 4 -      3104 A-AAT
i Tolypeutes_matacus.TolMat_scaffold_475685             C 0 I 10
s Tragulus_javanicus.TraJav_scaffold_14717                  10278 2 +     90398 A-A--
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 I 1
s Trichechus_manatus.JH594618.1                          16090457 4 +  31416278 A-TAT
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2801730 4 -   3938065 A-AAC
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                   10553 4 +     13056 A-AAC
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69318667 2 -  96451834 A-A--
i Tursiops_truncatus.MRVK01000923.1                     C 0 I 1
s Uropsilus_gracilis.UroGra_scaffold_4115                    1413 2 +    136657 A-A--
i Uropsilus_gracilis.UroGra_scaffold_4115               I 5 I 1
s Ursus_maritimus.KK498671.1                              6522165 2 +  28682327 G-A--
i Ursus_maritimus.KK498671.1                            C 0 I 1
s Varecia_rubra.k141_432109                                 10029 4 -     20643 A-AAT
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             29564 4 -     33872 A-AAT
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1529692 2 -   2331223 a-a--
i Vicugna_pacos.KN269600.1                              C 0 I 6
s Vulpes_lagopus.VulLag_flattened_line_2045                145844 2 -    281493 A-A--
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 I 1
s Xerus_inauris.XerIna_scaffold_7898                       132162 2 -    134049 A-A--
i Xerus_inauris.XerIna_scaffold_7898                    C 0 I 5
s Zalophus_californianus.ZalCal_flattened_line_4097        221292 1 -    227762 A----
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_202118                     1849 2 -      3360 T-T--
i Zapus_hudsonius.ZapHud_scaffold_202118                I 189 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            3252 2 -     13665 A-A--
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 I 1
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Oryctolagus_cuniculus.CM000803.1                      141884639 0 + 163896628 C
e Lepus_americanus.LepAme_scaffold_62849                    21623 0 +     22452 C
e Tonatia_saurophila.TonSau_scaffold_3334                  139594 1 -    259118 I
e Tapirus_terrestris.TapTer_scaffold_14939                  62938 1 +     99546 I
e Tapirus_indicus.TapInd_scaffold_176                      812295 1 +   1148477 I
e Glis_glis.GliGli_scaffold_79770                           17065 5 -     18683 I
e Hylobates_pileatus_a.tarseq_592                             37267 2881 -     60944 I
e Trachypithecus_pileatus.k141_532233                       30126 0 -     40754 I
e Trachypithecus_phayrei.ctg364                            232455 0 -   1198723 I
e Trachypithecus_obscurus.k141_411399                         131 0 +     12010 I
e Trachypithecus_melamera.k141_950981                        2232 0 -      3512 I
e Trachypithecus_leucocephalus.k141_352489                   1214 0 +      9423 I
e Trachypithecus_laotum.k141_897381                         45646 0 -     53586 I
e Trachypithecus_hatinhensis.k141_641377                     1240 0 +      1365 I
e Trachypithecus_germaini.k141_240878                        5067 3 -     24955 I
e Trachypithecus_geei.k141_137495                           30106 0 -     42322 I
e Trachypithecus_francoisi.k141_1012484                       874 0 +      8809 I
e Trachypithecus_cristatus.k141_968903                      32589 3 +     43409 I
e Trachypithecus_crepusculus.k141_863597                     4944 0 -     23436 I
e Trachypithecus_auratus.k141_672638                         4947 3 +     38635 I
e Tarsius_wallacei.k141_48636                               64696 0 +     65473 C
e Tarsius_lariang.k141_609102                               31387 0 +     42269 C
e Semnopithecus_vetulus.k141_748269                          4706 0 +     17284 I
e Semnopithecus_schistaceus.k141_628310                     45652 0 -     53123 I
e Semnopithecus_priam.k141_368201                           10107 0 -     20692 I
e Semnopithecus_johnii.k141_1300894                          1368 0 +     13764 I
e Semnopithecus_hypoleucos.k141_2141024                      1351 0 -      8815 I
e Semnopithecus_entellus.k141_1743075                       45578 0 +     45790 I
e Rhinopithecus_strykeri.ctg241                            462135 0 +   1472273 I
e Rhinopithecus_bieti.k119_554384                            2917 0 -     17045 C
e Pygathrix_nigripes_a.k141_758202                             3050 0 -      8240 I
e Pygathrix_nigripes_b.ctg25                                14340869 0 -  15297009 I
e Pygathrix_cinerea.k141_951151                              3033 0 -      8225 I
e Presbytis_mitrata.k141_1767317                            10996 0 +     15869 I
e Presbytis_comata.k141_678168                              11007 0 +     11126 I
e Pithecia_vanzolinii.k141_831006                           15424 0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514 0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521 0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292 0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093 0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038 0 +     78826 C
e Pithecia_albicans.k141_991845                             45662 0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000342.1                3428480 0 -   4356645 I
e Piliocolobus_kirkii.k141_451083                            4879 0 -     13367 I
e Piliocolobus_gordonorum.k141_736355                       29715 0 +     67079 I
e Piliocolobus_badius.k141_512007                           29798 0 +     37672 I
e Nasalis_larvatus.k141_1382660                              4275 0 +      5784 I
e Colobus_polykomos.k141_1178012                               88 3 -     11758 I
e Colobus_guereza.LG08                                   96946830 0 - 156195979 I
e Colobus_angolensis.KN983490.1                            283936 0 +    886210 I
e Cephalopachus_bancanus.k141_702587                        12545 0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530 0 +    345090 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               18156 2 +    209709 a--a
s Allenopithecus_nigroviridis.k141_2469532                   6030 2 -     60446 A--A
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         6746 2 -     29318 A--A
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         5684 2 +     38766 A--A
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          6640 2 -     80423 A--A
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              1620 2 +     19852 A--A
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                3864 2 -     12443 A--A
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                             1163 2 +      5070 A--A
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                  908 2 -      1641 A--A
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          3647 2 -     24210 A--A
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_494922                              151 2 -      8325 A--A
i Alouatta_nigerrima.k141_494922                        C 0 C 0
s Alouatta_palliata.k141_405616                              6065 2 +     16794 A--A
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                            1197 2 -      1470 A--A
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             5342 2 -      9835 A--A
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Aotus_azarae.k141_3170768                                 66949 2 +     78111 A--A
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            9893 2 +     22701 A--A
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5753860 2 +   9889416 A--A
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                            10459 2 -    104377 A--A
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                              10466 2 +     23246 A--A
i Aotus_vociferans.k141_718647                          C 0 C 0
s Arctocebus_calabarensis.k141_587554                        7043 2 +      9265 G--A
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9543753 2 +  39197703 A--A
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             65027 2 +     85812 A--A
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                16040 2 +     89302 A--A
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             20541 2 -     58268 A--A
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             68535 2 +    119057 A--A
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              10504 2 -     25888 A--A
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                11566 2 -     16375 G--G
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               5182 2 +      6337 G--G
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Cacajao_ayresi.k141_724503                               118402 2 -    171031 A--A
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 17422 2 +    125063 A--A
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                19469 2 -    216513 A--A
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       12012 2 -    134917 A--A
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Cebus_albifrons.Contig22                               18896129 2 -  29618158 A--A
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                12779 2 -     26817 A--A
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                17023 2 +     25043 A--A
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cercocebus_atys.KQ010443.1                              6559970 2 +   6739814 A--A
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      31447 2 +     60454 A--A
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          6651 2 -     21101 A--A
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         63961 2 -    107033 A--A
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        6824 2 -     17608 A--A
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          3989 2 +     45019 A--A
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           4265 2 +     15177 A--A
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          6871 2 +     16677 A--A
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           29061 2 +     35983 A--A
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11995592 2 +  12117833 A--A
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46482568 2 +  46592721 A--A
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                        685 2 -     27215 A--A
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       6885 2 +     35577 A--A
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        6679 2 -     25661 A--A
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        6851 2 -     17744 A--A
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        26220 2 +     37128 A--A
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           5267 4 -      6963 GAAA
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      I 10 I 2
s Cheirogaleus_major.k141_1157592                           63776 2 -     68416 G--G
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                           12896 2 +     13308 G--G
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                            10065 2 -     18223 A--A
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              1803 2 +    188999 A--A
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           46102 2 +     57117 A--A
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          50782 2 +     54541 A--A
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chiropotes_israelita.k141_1189915                         75583 2 +    196370 A--A
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          19764 2 +     40510 A--A
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15144405 2 -  15256731 A--A
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      38869 2 -     53260 A--A
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101149428 2 + 101219884 A--A
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                19282 4 -     21363 AAAA
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 I 2
s Choloepus_hoffmanni.KN194586.1                           764586 4 +    964067 AAAA
i Choloepus_hoffmanni.KN194586.1                        C 0 I 2
s Chrysochloris_asiatica.ChrAsi_scaffold_954668              1511 4 -      1738 CACA
i Chrysochloris_asiatica.ChrAsi_scaffold_954668         C 0 I 2
s Dasypus_novemcinctus.JH568778.1                          186313 4 -   6883506 GAAA
i Dasypus_novemcinctus.JH568778.1                       I 10 I 2
s Daubentonia_madagascariensis.ctg11                     16849728 2 +  31942871 G--G
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Echinops_telfairi.JH980316.1                           23000503 4 -  44670279 CATA
i Echinops_telfairi.JH980316.1                          C 0 I 2
s Elephantulus_edwardii.JH947210.1                        7834757 4 +  15467074 CAAG
i Elephantulus_edwardii.JH947210.1                      C 0 I 2
s Erythrocebus_patas.Contig8                             48781438 2 -  48907691 A--A
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eulemur_albifrons.k141_715837                              9872 2 +     13586 G--G
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_1015201                              3131 2 -      4292 G--G
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            16268 2 +     36558 G--G
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            12590 2 +     60246 G--G
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                16075 2 +    109717 G--G
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 4058 2 -     19505 G--G
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                20733 2 +     27497 G--G
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           23189 2 +     26808 G--G
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                37921 2 +     46535 G--G
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              20662 2 -     29447 G--G
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Galago_moholi.ctg555                                     215895 2 -    847004 G--A
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           18256 2 -     43889 G--A
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          15400 2 +     27357 G--A
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               160170 2 +    324696 G--A
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 I 2
s Gorilla_beringei.k141_111300                               9854 2 -     14630 A--A
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119656954 2 - 195582420 A--A
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         6661 2 +     10286 A--G
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             5139 2 -     11661 A--G
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                            10466 2 +     56096 A--G
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        33715 2 -     42470 A--G
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        50338 2 -     54384 A--G
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               63465 4 +     73687 CACA
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 I 2
s Indri_indri.k141_2197838                                   2184 2 +      3484 G--G
i Indri_indri.k141_2197838                              C 0 C 0
s Lagothrix_lagothricha.k141_12968                          54624 2 -    147782 A--A
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lemur_catta.scaffold_1                                258412016 2 - 285822530 G--G
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        29322 2 +     39228 G--G
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            58686 2 +     63517 G--G
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        37066 2 -     38897 G--G
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      3112 2 -     13103 G--G
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Lophocebus_aterrimus.ctg55                             19253059 2 +  19376315 A--A
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           15858 2 +     84689 G--A
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3783596 2 +   6799190 G--A
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20599390 4 -  62548349 CACG
i Loxodonta_africana.GL010040.1                         C 0 I 2
s Macaca_arctoides.k141_2201161                             24810 2 +     74745 A--A
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12711271 2 +  12821369 A--A
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                3844 2 -     26467 A--A
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           51715 2 +     63263 A--A
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 3825 2 -     26361 A--A
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 7015 2 -      7381 A--A
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  50244 2 -     79256 A--A
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196040342 2 + 196197964 A--A
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11450512 2 +  11645122 A--A
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   9198 2 -     46448 A--A
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                6861 2 -     13212 A--A
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 20541 2 -     55006 A--A
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43845656 2 +  43892939 A--A
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               21825 2 -     24607 A--A
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               9195 2 -     27140 A--A
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43442231 2 -  43563597 A--A
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4455035 2 -   4543643 A--A
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Microcebus_murinus.CM007691.1                          16515047 2 +  47401472 A--G
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  42071 4 -     48017 CACA
i Microgale_talazaci.MicTal_scaffold_34660              C 0 I 2
s Miopithecus_ogouensis.k141_2935907                         6777 2 +     29742 A--A
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirza_zaza.k141_593947                                     5730 2 -     12809 A--G
i Mirza_zaza.k141_593947                                C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             8256 4 -      8794 GGAA
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 I 2
s Nycticebus_bengalensis.LG16                            65572521 2 -  95554990 G--A
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_771591                            15931 2 +     16181 G--A
i Nycticebus_coucang.k141_771591                        I 10 I 1
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65680709 2 +  89412551 g--a
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            5000691 2 -  23139505 G--A
i Ochotona_princeps.JH802095.1                          C 0 I 2
s Orycteropus_afer.OryAfe_flattened_line_13509              64788 4 -     66828 CACA
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 I 2
s Otolemur_crassicaudatus.k141_505435                        5757 2 -     53940 G--A
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18013726 2 -  38779656 G--A
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Pan_paniscus.CM003386.1                               127579133 2 - 205426864 A--A
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120156293 2 - 196562556 A--A
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Papio_anubis.CM001492.2                               188161020 2 - 188283584 A--A
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              4110 2 +     25005 A--A
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47518392 2 +  47705337 A--A
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 72383 2 -    104429 A--A
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   10915 2 +     14967 A--A
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 6780 2 -      7628 A--A
i Papio_ursinus.k141_1345919                            C 0 C 0
s Perodicticus_ibeanus.k141_117958                          11421 2 -     23713 G--A
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           12572 2 +     61070 G--A
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       26714 2 +     44506 A--A
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        26927 2 +     67491 A--A
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      17166 2 -     98129 A--A
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     26767 2 +    147771 A--A
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         3402 2 -     43940 A--A
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          7485 2 -     55515 A--A
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         26839 2 +    152463 A--A
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       4647 2 -    119457 A--A
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         16561 2 +    134592 A--A
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          27149 2 -     75465 A--A
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              191764 2 -    373494 A--A
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19812411 2 +  19899266 A--A
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                4571 4 -      9567 CACA
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 I 2
s Prolemur_simus.MPIZ01000048.1                           6853387 2 +  12164890 G--G
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     22196 2 -     30946 N--N
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         8474 2 +     11805 G--G
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           47808 2 +     52369 G--G
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         40195 2 -     44753 G--G
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            22118 2 +     27322 G--G
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       21767 2 -     53241 G--G
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         44030 2 -     48185 G--G
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15677171 2 -  43202129 a--a
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        9084 2 +     34089 A--A
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              9024 2 -     60842 A--A
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              9118 2 +     67014 A--A
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              9095 2 +     60816 A--A
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 9032 2 -     76454 A--A
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17345817 2 -  30362882 A--A
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         25138 2 -     62485 A--A
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               17930 4 +     45698 GGAA
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 I 2
s Theropithecus_gelada.CM009951.1                       194012553 2 - 194193292 A--A
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                  1113 4 -      3104 GAAA
i Tolypeutes_matacus.TolMat_scaffold_475685             I 10 I 2
s Trichechus_manatus.JH594618.1                          16090461 4 +  31416278 CACA
i Trichechus_manatus.JH594618.1                         C 0 I 2
s Tupaia_chinensis.KB320831.1                             2801734 1 -   3938065 G---
i Tupaia_chinensis.KB320831.1                           C 0 I 1
s Tupaia_tana.TupTan_flattened_line_68454                   10557 1 +     13056 G---
i Tupaia_tana.TupTan_flattened_line_68454               C 0 I 1
s Varecia_rubra.k141_432109                                 10033 2 -     20643 G--G
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             29568 2 -     33872 G--G
i Varecia_variegata.k141_775891                         C 0 C 0
e Eptesicus_fuscus.JH977687.1                             4710441 6 +   6522550 I
e Macroglossus_sobrinus.MacSob_scaffold_879                703318 7 +    802869 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Petromus_typicus.PetTyp_scaffold_33007                    17586 0 -     36578 C
e Sorex_araneus.JH798170.1                               17775819 1 -  27805282 I
e Dinomys_branickii.DinBra_scaffold_1996                   160449 0 +    228994 C
e Erinaceus_europaeus.JH835290.1                         11542975 1 +  16010500 I
e Aplodontia_rufa.AprRuf_scaffold_101456                     3124 5 +     11424 I
e Oryctolagus_cuniculus.CM000803.1                      141884639 0 + 163896628 C
e Lepus_americanus.LepAme_scaffold_62849                    21623 0 +     22452 C
e Perognathus_longimembris.PerPac_flattened_line_19359       2894 0 +     49596 C
e Dipodomys_stephensi.DipSte_scaffold_84338                  3273 0 -     11986 C
e Dipodomys_ordii.KN672545.1                              3660899 0 +   4240102 C
e Suricata_suricatta.SurSur_flattened_line_20339            34713 1 +     62062 I
e Nomascus_siki_a.k141_421408                                  1310 0 +     16235 C
e Ziphius_cavirostris.ZipCav_flattened_line_60625            3254 1 -     13665 I
e Zalophus_californianus.ZalCal_flattened_line_4097        221293 0 -    227762 C
e Vulpes_lagopus.VulLag_flattened_line_2045                145846 1 -    281493 I
e Vicugna_pacos.KN269600.1                                1529694 6 -   2331223 I
e Ursus_maritimus.KK498671.1                              6522167 1 +  28682327 I
e Uropsilus_gracilis.UroGra_scaffold_4115                    1415 1 +    136657 I
e Tursiops_truncatus.MRVK01000923.1                      69318669 1 -  96451834 I
e Tragulus_javanicus.TraJav_scaffold_14717                  10280 1 +     90398 I
e Tonatia_saurophila.TonSau_scaffold_3334                  139594 1 -    259118 I
e Tapirus_terrestris.TapTer_scaffold_14939                  62938 1 +     99546 I
e Tapirus_indicus.TapInd_scaffold_176                      812295 1 +   1148477 I
e Tadarida_brasiliensis.TadBra_scaffold_61492                3835 6 +     20549 I
e Sus_scrofa.CM000824.4                                 189276719 0 + 218635234 C
e Spilogale_gracilis.SpiGra_flattened_line_905             240518 1 -    276980 I
e Solenodon_paradoxus.SolPar_flattened_line_1012            25680 1 +    739146 I
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   41027 1 -    114521 I
e Saiga_tatarica.SaiTat_scaffold_371890                      2972 1 -      4338 I
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                21736 6 +    109198 I
e Rhinolophus_sinicus.LVEH01000179.1                      1794211 6 +   2252614 I
e Rangifer_tarandus.RanTarSib_scaffold_24239                22292 1 +     68503 I
e Puma_concolor.QAVW01000427.1                          131541311 1 - 161321710 I
e Pteropus_vampyrus.KN525959.1                             606340 6 -   3946241 I
e Pteropus_alecto.KB031157.1                             13248390 7 -  17261082 I
e Pteronura_brasiliensis.PteBra_flattened_line_1343        251744 0 -    344369 C
e Pteronotus_parnellii.KE867983.1                            7587 1 -     27784 I
e Platanista_gangetica.PlaMin_flattened_line_72990          10881 1 +     21690 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306           101018 6 +    112873 I
e Phocoena_phocoena.PhoPho_flattened_line_53071              4399 1 +      8220 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    122846 1 -    135482 I
e Pantholops_hodgsonii.KE114631.1                         1073575 1 -   1292953 I
e Panthera_tigris.KE721879.1                              5034833 1 -   6340057 I
e Panthera_pardus.KV860323.1                              3645192 1 +  18214204 I
e Panthera_onca.PanOnc_flattened_line_1615                  41376 1 +    295523 I
e Ovis_canadensis.OviCan_scaffold_6251                      85943 1 +    140051 I
e Ovis_aries.CM001582.2                                 134084705 1 - 275406953 I
e Otocyon_megalotis.JAEUCK010005121.1                      316619 1 -    505867 I
e Orcinus_orca.KB316965.1                                 7229939 1 -   7562323 I
e Okapia_johnstoni.LVCL01S0017931.1                         43513 1 +     78940 I
e Odocoileus_virginianus.KZ101650.1                       1085448 1 +   1425656 I
e Odobenus_rosmarus.KB229369.1                             686434 1 -   3126709 I
e Nyctereutes_procyonoides.CAJHUB010000786.1                39481 1 +   3668941 I
e Noctilio_leporinus.NocLep_scaffold_12062                  52249 1 +     94413 I
e Neophocaena_asiaeorientalis.KZ688543.1                  3956258 1 -   4490290 I
e Neomonachus_schauinslandi.NINY01007774.1                4491736 1 -  14209539 I
e Myotis_myotis.MyoMyo_scaffold_6123                        15502 6 +     66751 I
e Myotis_lucifugus.GL429887.1                             3470269 6 -   3747815 I
e Myotis_davidii.KB114863.1                               5023840 6 +   6462685 I
e Myotis_brandtii.KE161952.1                               972764 6 +   8389877 I
e Mustela_putorius.JH417978.1                             4430101 0 -  28371801 C
e Murina_feae.MurFea_scaffold_2254                          25750 6 -    100666 I
e Mungos_mungo.MunMun_flattened_line_8729                  151823 1 -    168139 I
e Moschus_moschiferus.MosMos_scaffold_78805                  8469 1 -     19904 I
e Mormoops_blainvillei.MorMeg_scaffold_2952                164935 1 +    265003 I
e Monodon_monoceros.MonMon_M_scaffold_5598                 151667 1 +    154973 I
e Mirounga_angustirostris.MirAng_flattened_line_8852        18341 1 -    104932 I
e Miniopterus_schreibersii.MinSch_scaffold_24116            39042 6 +     45743 I
e Miniopterus_natalensis.LDJU01000022.1                   8214584 6 +  10048721 I
e Micronycteris_hirsuta.MicHir_scaffold_37978               26419 1 -     32043 I
e Mesoplodon_bidens.MesBid_scaffold_96348                    3892 1 -     12939 I
e Mellivora_capensis.MelCap_flattened_line_15433             7994 0 -     87323 C
e Megaderma_lyra.MegLyr_scaffold_3562                       67097 5 -    234502 I
e Manis_pentadactyla.KN017078.1                             41205 1 +     58827 I
e Manis_javanica.JSZB01003966.1                            153603 1 +    252755 I
e Lycaon_pictus.CM007556.1                               11096612 1 +  39895028 I
e Lipotes_vexillifer.KE558548.1                            141241 1 +   3060487 I
e Leptonychotes_weddellii.KB714749.1                      3092845 1 -   3498232 I
e Lasiurus_borealis.LasBor_scaffold_59542                    7008 6 +     26176 I
e Kogia_breviceps.KogBre_flattened_line_35920               28936 1 +     37189 I
e Inia_geoffrensis.IniGeo_flattened_line_66725              14301 1 +     17520 I
e Hyaena_hyaena.HyaHya_flattened_line_20729                 24524 1 -     67322 I
e Hipposideros_galeritus.HipGal_scaffold_52959               2843 6 +     26078 I
e Hipposideros_armiger.JXIK01001085.1                      285157 6 -    477199 I
e Hippopotamus_amphibius.HipAmp_scaffold_1308              152128 1 +    277961 I
e Hemitragus_hylocrius.HemHyl_scaffold_16669                34920 1 -     91191 I
e Helogale_parvula.HelPar_flattened_line_22962              24084 1 +     53719 I
e Giraffa_tippelskirchi.LVKQ01S012154.1                    187790 1 -    189561 I
e Felis_nigripes.FelNig_flattened_line_8080                 28454 1 +     52776 I
e Felis_catus_fca126.CM031420.1                         129287351 1 - 158578461 I
e Eubalaena_japonica.EubJap_flattened_line_7756             66777 1 +     89355 I
e Eschrichtius_robustus.EscRob_flattened_line_685          320321 1 +    330699 I
e Equus_przewalskii.ATBW01073585.1                          17791 6 +     92910 I
e Equus_caballus.CM000402.2                              13356301 6 +  41866177 I
e Equus_asinus.JREZ01000062.1                             5857815 6 -   7175178 I
e Enhydra_lutris.KZ291749.1                              85878900 0 +  99434291 C
e Elaphurus_davidianus.JRFZ01086400.1                     1498010 1 +   1727528 I
e Eidolon_helvum.KE772537.1                                 14679 193 +     24177 I
e Diceros_bicornis.DicBicMic_scaffold_9545                   8589 6 +    151128 I
e Dicerorhinus_sumatrensis.PEKH010003161.1                 327955 6 +    993696 I
e Desmodus_rotundus.PEHR01015603.1                            365 1 +       472 I
e Delphinapterus_leucas.KZ290064.1                       80042074 1 -  96802777 I
e Cryptoprocta_ferox.CryFer_flattened_line_19014            58968 1 -     70449 I
e Crocidura_indochinensis.CroInd_scaffold_27484              3483 1 -     22648 I
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         3981 6 -      5782 I
e Condylura_cristata.JH655880.1                          60623593 1 +  78930452 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_160623         9313 6 -      9338 I
e Catagonus_wagneri.CatWag_scaffold_1305                   164327 0 -    276539 C
e Carollia_perspicillata.CarPer_scaffold_4436               63465 1 +     67245 I
e Capra_hircus.CM004562.1                               135713882 1 - 157403528 I
e Capra_aegagrus.CM003214.1                              21335529 1 + 157394656 I
e Canis_lupus_orion.HG994411.1                           16463941 1 -  44759192 I
e Canis_lupus_familiaris.chr31                           11097156 1 +  39895921 I
e Canis_lupus_dingo.QKWQ01001993.1                       11274659 1 -  35597290 I
e Canis_lupus_VD.CanFam_VD_scaffold_16982                   22736 1 +     87036 I
e CanFam4.chr31                                          11527762 1 +  39901454 I
e Camelus_ferus.KB016973.1                                2978024 6 +   6889770 I
e Camelus_dromedarius.KN271192.1                           402286 6 -  15254737 I
e Camelus_bactrianus.KN276303.1                           3224586 6 -   8989139 I
e Bubalus_bubalis.KI419065.1                               676611 1 +   1914593 I
e Bos_taurus.CM000177.6                                  22667772 1 + 158972876 I
e Bos_mutus.JH883513.1                                     421300 1 +    998990 I
e Bos_indicus.CM003021.1                                 22959120 1 + 161108492 I
e Bison_bison.KN264915.1                                   305015 1 -   6870073 I
e Beatragus_hunteri.BeaHun_scaffold_21644                   50065 1 -     72089 I
e Balaenoptera_bonaerensis.DF502048.1                       10650 1 -     13118 I
e Balaenoptera_acutorostrata.KI537095.1                  26385477 1 +  51448160 I
e Artibeus_jamaicensis.ArtJam_scaffold_41619                12471 1 -     29036 I
e Antilocapra_americana.AntAmePen_scaffold_27338             5257 1 +     55446 I
e Anoura_caudifer.AnoCau_scaffold_422                      394183 1 -    631301 I
e Ammotragus_lervia.NIVO01013474.1                        3528096 1 +   4113121 I
e Ailurus_fulgens.LNAC01000003.1                          7101853 0 -  16596857 C
e Ailuropoda_melanoleuca.LNAT01000321.1                  10664899 1 +  23371972 I
e Acinonyx_jubatus.LLWD01000356.1                         2040956 1 +   3721120 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           21841 0 -    119109 C
e Glis_glis.GliGli_scaffold_79770                           17065 5 -     18683 I
e Zapus_hudsonius.ZapHud_scaffold_202118                     1851 0 -      3360 C
e Jaculus_jaculus.JH725517.1                              8579769 0 +  11848649 C
e Hylobates_pileatus_a.tarseq_592                             37267 2881 -     60944 I
e Hylobates_pileatus_b.ContigUN                                 14629174 0 -  25970782 C
e Allactaga_bullata.AllBul_scaffold_141108                   2022 0 -      7259 C
e Hylobates_muelleri.k141_1139146                            1726 0 +      4161 C
e Hylobates_klossii.k141_468230                              3828 0 +      5464 C
e Hylobates_agilis.k141_1136966                               348 0 +      9785 C
e Hylobates_abbotti.k141_1816750                             2339 0 +      3202 C
e Microtus_ochrogaster.CM001673.1                        22825422 0 -  98408828 C
e Xerus_inauris.XerIna_scaffold_7898                       132164 5 -    134049 I
e Trachypithecus_pileatus.k141_532233                       30126 0 -     40754 I
e Trachypithecus_phayrei.ctg364                            232455 0 -   1198723 I
e Trachypithecus_obscurus.k141_411399                         131 0 +     12010 I
e Trachypithecus_melamera.k141_950981                        2232 0 -      3512 I
e Trachypithecus_leucocephalus.k141_352489                   1214 0 +      9423 I
e Trachypithecus_laotum.k141_897381                         45646 0 -     53586 I
e Trachypithecus_hatinhensis.k141_641377                     1240 0 +      1365 I
e Trachypithecus_germaini.k141_240878                        5067 3 -     24955 I
e Trachypithecus_geei.k141_137495                           30106 0 -     42322 I
e Trachypithecus_francoisi.k141_1012484                       874 0 +      8809 I
e Trachypithecus_cristatus.k141_968903                      32589 3 +     43409 I
e Trachypithecus_crepusculus.k141_863597                     4944 0 -     23436 I
e Trachypithecus_auratus.k141_672638                         4947 3 +     38635 I
e Tarsius_wallacei.k141_48636                               64696 0 +     65473 C
e Tarsius_lariang.k141_609102                               31387 0 +     42269 C
e Spermophilus_dauricus.KZ294190.1                        2244669 5 +   2842873 I
e Sigmodon_hispidus.SigHis_scaffold_11332                  106308 0 -    120886 C
e Semnopithecus_vetulus.k141_748269                          4706 0 +     17284 I
e Semnopithecus_schistaceus.k141_628310                     45652 0 -     53123 I
e Semnopithecus_priam.k141_368201                           10107 0 -     20692 I
e Semnopithecus_johnii.k141_1300894                          1368 0 +     13764 I
e Semnopithecus_hypoleucos.k141_2141024                      1351 0 -      8815 I
e Semnopithecus_entellus.k141_1743075                       45578 0 +     45790 I
e Rhinopithecus_strykeri.ctg241                            462135 0 +   1472273 I
e Rhinopithecus_bieti.k119_554384                            2917 0 -     17045 C
e Rattus_norvegicus.chr11                                13918412 0 +  90463843 C
e Pygathrix_nigripes_a.k141_758202                             3050 0 -      8240 I
e Pygathrix_nigripes_b.ctg25                                14340869 0 -  15297009 I
e Pygathrix_cinerea.k141_951151                              3033 0 -      8225 I
e Psammomys_obesus.NESX01026517.1                           39806 0 +     77221 C
e Presbytis_mitrata.k141_1767317                            10996 0 +     15869 I
e Presbytis_comata.k141_678168                              11007 0 +     11126 I
e Pithecia_vanzolinii.k141_831006                           15424 0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514 0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521 0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292 0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093 0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038 0 +     78826 C
e Pithecia_albicans.k141_991845                             45662 0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000342.1                3428480 0 -   4356645 I
e Piliocolobus_kirkii.k141_451083                            4879 0 -     13367 I
e Piliocolobus_gordonorum.k141_736355                       29715 0 +     67079 I
e Piliocolobus_badius.k141_512007                           29798 0 +     37672 I
e Peromyscus_maniculatus.KI615458.1                       2840007 0 -   3366660 C
e Onychomys_torridus.OnyTor_scaffold_12578                  44140 0 +     62360 C
e Ondatra_zibethicus.OndZib_scaffold_6821                  131225 0 +    145789 C
e Octodon_degus.JH651621.1                                3691581 0 +  10294119 C
e Nasalis_larvatus.k141_1382660                              4275 0 +      5784 I
e Nannospalax_galili.KL201303.1                            125160 0 +    362372 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     96244 0 -    117718 C
e Muscardinus_avellanarius.MusAve_scaffold_9643             15473 5 +     98495 I
e Mus_spretus.CM004110.1                                 74337436 0 +  97876770 C
e Mus_pahari.LT608305.1                                  67561465 0 +  89017189 C
e Mus_musculus.chr16                                     75494713 0 +  98207768 C
e Mus_caroli.LT608236.1                                  70772661 0 +  92629107 C
e Mesocricetus_auratus.KB708139.1                         1052417 0 -  26018355 C
e Meriones_unguiculatus.MerUng_scaffold_9483                 2829 0 +    115071 C
e Marmota_marmota.CZRN01000005.1                         36878835 5 +  64221397 I
e Ictidomys_tridecemlineatus.JH393315.1                   7130968 5 +  13083262 I
e Hystrix_cristata.HysCri_scaffold_50788                    10136 0 +     22540 C
e Heterocephalus_glaber.JH602058.1                        2561243 0 +  31725842 C
e Graphiurus_murinus.GraMur_scaffold_4493                   80381 5 +    118900 I
e Fukomys_damarensis.KN123630.1                          13896746 0 -  19261668 C
e Ellobius_talpinus.LOJH01076532.1                            941 0 +      9159 C
e Ellobius_lutescens.LOEQ01003611.1                        244597 0 -    369425 C
e Dolichotis_patagonum.DolPat_scaffold_14102                41174 0 -     73477 C
e Dasyprocta_punctata.DasPun_flattened_line_634             62605 0 -    236241 C
e Cuniculus_paca.CunPac_flattened_line_16637                21465 0 +     26546 C
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 36527 0 -     67205 C
e Ctenodactylus_gundi.CteGun_scaffold_447                  214856 0 -    956709 C
e Cricetulus_griseus.LT883672.1                          53035852 2 +  72327488 I
e Cricetomys_gambianus.CriGam_scaffold_949                 283553 0 -    399297 C
e Colobus_polykomos.k141_1178012                               88 3 -     11758 I
e Colobus_guereza.LG08                                   96946830 0 - 156195979 I
e Colobus_angolensis.KN983490.1                            283936 0 +    886210 I
e Chinchilla_lanigera.JH721867.1                         15964972 0 +  43084221 C
e Cephalopachus_bancanus.k141_702587                        12545 0 +     21754 C
e Cavia_tschudii.CavTsc_scaffold_488                       180388 0 +    436027 C
e Cavia_porcellus.DS562889.1                             15802216 0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15790277 0 -  24422027 C
e Castor_canadensis.CasCan_scaffold_1326                      582 0 -    202837 C
e Carlito_syrichta.NW_007248099.1                          313530 0 +    345090 C
e Capromys_pilorides.CapPil_scaffold_780116                   141 0 +      1571 C
e Acomys_cahirinus.AcoCah_scaffold_1625                    118649 0 -    189883 C
e Nomascus_siki_b.tarseq_453                             6708 0 +     12787 C
e Nomascus_annamensis.k141_762468                             845 0 -      2755 C
e Symphalangus_syndactylus.tarseq_24                        19433 0 -  13920577 C
e Nomascus_gabriellae.k141_1400361                           1396 0 -      2203 C
e Nomascus_concolor.k141_256540                              7457 0 -      8966 C
e Hoolock_leuconedys.ctg79                                      9768 0 -   7690867 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               18158 3 +    209709 aaa
s Acinonyx_jubatus.LLWD01000356.1                         2040957 1 +   3721120 a--
i Acinonyx_jubatus.LLWD01000356.1                       I 1 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    118649 1 -    189883 A--
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10664900 1 +  23371972 A--
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 1 C 0
s Ailurus_fulgens.LNAC01000003.1                          7101853 1 -  16596857 a--
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_141108                   2022 1 -      7259 G--
i Allactaga_bullata.AllBul_scaffold_141108              C 0 I 5
s Allenopithecus_nigroviridis.k141_2469532                   6032 3 -     60446 AAA
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         6748 3 -     29318 AAA
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         5686 3 +     38766 AAA
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          6642 3 -     80423 AAA
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              1622 3 +     19852 AAA
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                3866 3 -     12443 AAA
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                             1165 3 +      5070 AAA
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                  910 3 -      1641 AAA
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          3649 3 -     24210 AAA
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_494922                              153 3 -      8325 AAA
i Alouatta_nigerrima.k141_494922                        C 0 C 0
s Alouatta_palliata.k141_405616                              6067 3 +     16794 AAA
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                            1199 3 -      1470 AAA
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             5344 3 -      9835 AAA
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3528097 1 +   4113121 A--
i Ammotragus_lervia.NIVO01013474.1                      I 1 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      394184 1 -    631301 A--
i Anoura_caudifer.AnoCau_scaffold_422                   I 1 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             5258 1 +     55446 A--
i Antilocapra_americana.AntAmePen_scaffold_27338        I 1 C 0
s Aotus_azarae.k141_3170768                                 66951 3 +     78111 AAA
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            9895 3 +     22701 AAA
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5753862 3 +   9889416 AAA
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                            10461 3 -    104377 AAA
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                              10468 3 +     23246 AAA
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     3129 1 +     11424 A--
i Aplodontia_rufa.AprRuf_scaffold_101456                I 5 C 0
s Arctocebus_calabarensis.k141_587554                        7045 1 +      9265 A--
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                12472 1 -     29036 A--
i Artibeus_jamaicensis.ArtJam_scaffold_41619            I 1 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9543755 3 +  39197703 AAA
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             65029 3 +     85812 AAA
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                16042 3 +     89302 AAA
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             20543 3 -     58268 AAA
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             68537 3 +    119057 AAA
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              10506 3 -     25888 AAA
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                11568 1 -     16375 G--
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               5184 1 +      6337 G--
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26385478 1 +  51448160 A--
i Balaenoptera_acutorostrata.KI537095.1                 I 1 C 0
s Balaenoptera_bonaerensis.DF502048.1                       10651 1 -     13118 A--
i Balaenoptera_bonaerensis.DF502048.1                   I 1 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   50066 1 -     72089 A--
i Beatragus_hunteri.BeaHun_scaffold_21644               I 1 C 0
s Bison_bison.KN264915.1                                   305016 1 -   6870073 A--
i Bison_bison.KN264915.1                                I 1 C 0
s Bos_indicus.CM003021.1                                 22959121 1 + 161108492 A--
i Bos_indicus.CM003021.1                                I 1 C 0
s Bos_mutus.JH883513.1                                     421301 1 +    998990 A--
i Bos_mutus.JH883513.1                                  I 1 C 0
s Bos_taurus.CM000177.6                                  22667773 1 + 158972876 A--
i Bos_taurus.CM000177.6                                 I 1 C 0
s Bubalus_bubalis.KI419065.1                               676612 1 +   1914593 A--
i Bubalus_bubalis.KI419065.1                            I 1 C 0
s Cacajao_ayresi.k141_724503                               118404 3 -    171031 AAA
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 17424 3 +    125063 AAA
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                19471 3 -    216513 AAA
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       12014 3 -    134917 AAA
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3224592 1 -   8989139 a--
i Camelus_bactrianus.KN276303.1                         I 6 C 0
s Camelus_dromedarius.KN271192.1                           402292 1 -  15254737 a--
i Camelus_dromedarius.KN271192.1                        I 6 C 0
s Camelus_ferus.KB016973.1                                2978030 1 +   6889770 a--
i Camelus_ferus.KB016973.1                              I 6 C 0
s CanFam4.chr31                                          11527763 1 +  39901454 A--
i CanFam4.chr31                                         I 1 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   22737 1 +     87036 A--
i Canis_lupus_VD.CanFam_VD_scaffold_16982               I 1 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11274660 1 -  35597290 a--
i Canis_lupus_dingo.QKWQ01001993.1                      I 1 C 0
s Canis_lupus_familiaris.chr31                           11097157 1 +  39895921 a--
i Canis_lupus_familiaris.chr31                          I 1 C 0
s Canis_lupus_orion.HG994411.1                           16463942 1 -  44759192 a--
i Canis_lupus_orion.HG994411.1                          I 1 C 0
s Capra_aegagrus.CM003214.1                              21335530 1 + 157394656 A--
i Capra_aegagrus.CM003214.1                             I 1 C 0
s Capra_hircus.CM004562.1                               135713883 1 - 157403528 A--
i Capra_hircus.CM004562.1                               I 1 C 0
s Capromys_pilorides.CapPil_scaffold_780116                   141 1 +      1571 T--
i Capromys_pilorides.CapPil_scaffold_780116             C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               63466 1 +     67245 A--
i Carollia_perspicillata.CarPer_scaffold_4436           I 1 C 0
s Castor_canadensis.CasCan_scaffold_1326                      582 1 -    202837 A--
i Castor_canadensis.CasCan_scaffold_1326                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   164327 1 -    276539 A--
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15790277 1 -  24422027 t--
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15802216 1 -  24440124 t--
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       180388 1 +    436027 T--
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18896131 3 -  29618158 AAA
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                12781 3 -     26817 AAA
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                17025 3 +     25043 AAA
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4369562 1 +   7569818 a--
i Ceratotherium_simum.JH767818.1                        I 6 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         9319 1 -      9338 A--
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    I 6 C 0
s Cercocebus_atys.KQ010443.1                              6559972 3 +   6739814 AAA
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      31449 3 +     60454 AAA
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          6653 3 -     21101 AAA
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         63963 3 -    107033 AAA
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        6826 3 -     17608 AAA
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          3991 3 +     45019 AAA
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           4267 3 +     15177 AAA
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          6873 3 +     16677 AAA
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           29063 3 +     35983 AAA
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11995594 3 +  12117833 AAA
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46482570 3 +  46592721 AAA
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                        687 3 -     27215 AAA
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       6887 3 +     35577 AAA
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        6681 3 -     25661 AAA
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        6853 3 -     17744 AAA
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        26222 3 +     37128 AAA
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           5273 1 -      6963 A--
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      I 2 C 0
s Cheirogaleus_major.k141_1157592                           63778 1 -     68416 A--
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                           12898 1 +     13308 A--
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                            10067 3 -     18223 AAA
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              1805 3 +    188999 AAA
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           46104 3 +     57117 AAA
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          50784 3 +     54541 AAC
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15964972 1 +  43084221 t--
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         75585 3 +    196370 AAA
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          19766 3 +     40510 AAA
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15144407 3 -  15256731 AAA
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      38871 3 -     53260 AAA
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101149430 3 + 101219884 AAA
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                19288 1 -     21363 A--
i Choloepus_didactylus.ChoDid_scaffold_36182            I 2 I 3
s Choloepus_hoffmanni.KN194586.1                           764592 1 +    964067 A--
i Choloepus_hoffmanni.KN194586.1                        I 2 I 3
s Chrysochloris_asiatica.ChrAsi_scaffold_954668              1517 1 -      1738 A--
i Chrysochloris_asiatica.ChrAsi_scaffold_954668         I 2 I 4
s Condylura_cristata.JH655880.1                          60623594 1 +  78930452 A--
i Condylura_cristata.JH655880.1                         I 1 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         3987 1 -      5782 A--
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    I 6 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 283553 1 -    399297 a--
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53035854 1 +  72327488 a--
i Cricetulus_griseus.LT883672.1                         I 2 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              3484 1 -     22648 A--
i Crocidura_indochinensis.CroInd_scaffold_27484         I 1 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            58969 1 -     70449 A--
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 1 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 36527 1 -     67205 T--
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                21465 1 +     26546 T--
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             62605 1 -    236241 T--
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          186319 1 -   6883506 A--
i Dasypus_novemcinctus.JH568778.1                       I 2 C 0
s Daubentonia_madagascariensis.ctg11                     16849730 1 +  31942871 A--
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80042075 1 -  96802777 A--
i Delphinapterus_leucas.KZ290064.1                      I 1 C 0
s Desmodus_rotundus.PEHR01015603.1                            366 1 +       472 A--
i Desmodus_rotundus.PEHR01015603.1                      I 1 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 327961 1 +    993696 a--
i Dicerorhinus_sumatrensis.PEKH010003161.1              I 6 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   8595 1 +    151128 A--
i Diceros_bicornis.DicBicMic_scaffold_9545              I 6 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   160449 1 +    228994 T--
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3660899 1 +   4240102 A--
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  3273 1 -     11986 A--
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                41174 1 -     73477 T--
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           23000509 1 -  44670279 A--
i Echinops_telfairi.JH980316.1                          I 2 I 4
s Eidolon_helvum.AWHC01235761.1                              3559 1 -      8619 A--
i Eidolon_helvum.AWHC01235761.1                         I 8 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1498011 1 +   1727528 A--
i Elaphurus_davidianus.JRFZ01086400.1                   I 1 C 0
s Elephantulus_edwardii.JH947210.1                        7834763 1 +  15467074 C--
i Elephantulus_edwardii.JH947210.1                      I 2 I 3
s Ellobius_lutescens.LOEQ01003611.1                        244597 1 -    369425 A--
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01076532.1                            941 1 +      9159 A--
i Ellobius_talpinus.LOJH01076532.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85878900 1 +  99434291 a--
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4710447 1 +   6522550 A--
i Eptesicus_fuscus.JH977687.1                           I 6 C 0
s Equus_asinus.JREZ01000062.1                             5857821 1 -   7175178 a--
i Equus_asinus.JREZ01000062.1                           I 6 C 0
s Equus_caballus.CM000402.2                              13356307 1 +  41866177 a--
i Equus_caballus.CM000402.2                             I 6 C 0
s Equus_przewalskii.ATBW01073585.1                          17797 1 +     92910 a--
i Equus_przewalskii.ATBW01073585.1                      I 6 C 0
s Erinaceus_europaeus.JH835290.1                         11542976 1 +  16010500 G--
i Erinaceus_europaeus.JH835290.1                        I 1 C 0
s Erythrocebus_patas.Contig8                             48781440 3 -  48907691 AAA
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          320322 1 +    330699 A--
i Eschrichtius_robustus.EscRob_flattened_line_685       I 1 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             66778 1 +     89355 A--
i Eubalaena_japonica.EubJap_flattened_line_7756         I 1 C 0
s Eulemur_albifrons.k141_715837                              9874 1 +     13586 A--
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_1015201                              3133 1 -      4292 A--
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            16270 1 +     36558 A--
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            12592 1 +     60246 A--
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                16077 1 +    109717 A--
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 4060 1 -     19505 A--
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                20735 1 +     27497 A--
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           23191 1 +     26808 A--
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                37923 1 +     46535 A--
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              20664 1 -     29447 A--
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.AANG03202589.1                                  423 1 -       609 a--
i Felis_catus.AANG03202589.1                            I 1 C 0
s Felis_catus_fca126.CM031420.1                         129287352 1 - 158578461 a--
i Felis_catus_fca126.CM031420.1                         I 1 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 28455 1 +     52776 A--
i Felis_nigripes.FelNig_flattened_line_8080             I 1 C 0
s Fukomys_damarensis.KN123630.1                          13896746 1 -  19261668 t--
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     215897 1 -    847004 G--
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           18258 1 -     43889 G--
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          15402 1 +     27357 A--
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               160174 1 +    324696 A--
i Galeopterus_variegatus.GalVar_scaffold_354            I 2 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    187791 1 -    189561 A--
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 1 C 0
s Glis_glis.GliGli_scaffold_79770                           17070 1 -     18683 A--
i Glis_glis.GliGli_scaffold_79770                       I 5 C 0
s Gorilla_beringei.k141_111300                               9856 3 -     14630 AAA
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119656956 3 - 195582420 AAA
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   80386 1 +    118900 A--
i Graphiurus_murinus.GraMur_scaffold_4493               I 5 C 0
s Hapalemur_alaotrensis.k141_1280836                         6663 1 +     10286 A--
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             5141 1 -     11661 A--
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                            10468 1 +     56096 A--
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        33717 1 -     42470 A--
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        50340 1 -     54384 A--
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              24085 1 +     53719 A--
i Helogale_parvula.HelPar_flattened_line_22962          I 1 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                34921 1 -     91191 A--
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 1 C 0
s Heterocephalus_glaber.JH602058.1                        2561243 1 +  31725842 C--
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               63471 1 +     73687 A--
i Heterohyrax_brucei.HetBruBak_scaffold_25354           I 2 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              152129 1 +    277961 A--
i Hippopotamus_amphibius.HipAmp_scaffold_1308           I 1 C 0
s Hipposideros_armiger.JXIK01001085.1                      285163 1 -    477199 a--
i Hipposideros_armiger.JXIK01001085.1                   I 6 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959               2849 1 +     26078 A--
i Hipposideros_galeritus.HipGal_scaffold_52959          I 6 I 13
s Hoolock_leuconedys.ctg79                                      9768 2 -   7690867 -AA
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 24525 1 -     67322 A--
i Hyaena_hyaena.HyaHya_flattened_line_20729             I 1 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           21841 1 -    119109 T--
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_1816750                             2339 2 +      3202 -AA
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1136966                               348 2 +      9785 -AA
i Hylobates_agilis.k141_1136966                         C 0 C 0
s Hylobates_klossii.k141_468230                              3828 2 +      5464 -AA
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14629174 2 -  25970782 -AA
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            1726 2 +      4161 -AA
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                    10136 1 +     22540 T--
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7130973 1 +  13083262 a--
i Ictidomys_tridecemlineatus.JH393315.1                 I 5 C 0
s Indri_indri.k141_2197838                                   2186 1 +      3484 A--
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              14302 1 +     17520 A--
i Inia_geoffrensis.IniGeo_flattened_line_66725          I 1 C 0
s Jaculus_jaculus.JH725517.1                              8579769 1 +  11848649 G--
i Jaculus_jaculus.JH725517.1                            C 0 I 5
s Kogia_breviceps.KogBre_flattened_line_35920               28937 1 +     37189 A--
i Kogia_breviceps.KogBre_flattened_line_35920           I 1 C 0
s Lagothrix_lagothricha.k141_12968                          54626 3 -    147782 AAA
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    7014 1 +     26176 A--
i Lasiurus_borealis.LasBor_scaffold_59542               I 6 C 0
s Lemur_catta.scaffold_1                                258412018 1 - 285822530 A--
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        29324 1 +     39228 A--
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            58688 1 +     63517 A--
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        37068 1 -     38897 A--
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      3114 1 -     13103 A--
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3092846 1 -   3498232 a--
i Leptonychotes_weddellii.KB714749.1                    I 1 C 0
s Lipotes_vexillifer.KE558548.1                            141242 1 +   3060487 A--
i Lipotes_vexillifer.KE558548.1                         I 1 C 0
s Lophocebus_aterrimus.ctg55                             19253061 3 +  19376315 AAA
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           15860 1 +     84689 A--
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3783598 1 +   6799190 A--
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20599396 1 -  62548349 A--
i Loxodonta_africana.GL010040.1                         I 2 C 0
s Lycaon_pictus.CM007556.1                               11096613 1 +  39895028 a--
i Lycaon_pictus.CM007556.1                              I 1 C 0
s Macaca_arctoides.k141_2201161                             24812 3 +     74745 AAA
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12711273 3 +  12821369 AAA
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                3846 3 -     26467 AAA
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           51717 3 +     63263 AAA
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 3827 3 -     26361 AAA
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 7017 3 -      7381 AAA
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  50246 3 -     79256 AAA
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196040344 3 + 196197964 AAA
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11450514 3 +  11645122 AAA
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   9200 3 -     46448 AAA
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                6863 3 -     13212 AAA
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 20543 3 -     55006 AAA
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43845658 3 +  43892939 AAA
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               21827 3 -     24607 AAA
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               9197 3 -     27140 AAA
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4376               200499 1 +    248908 A--
i Macroglossus_sobrinus.MacSob_scaffold_4376            I 14 I 24
s Mandrillus_leucophaeus.scaffold125                     43442233 3 -  43563597 AAA
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4455037 3 -   4543643 AAA
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            153604 1 +    252755 a--
i Manis_javanica.JSZB01003966.1                         I 1 C 0
s Manis_pentadactyla.KN017078.1                             41206 1 +     58827 A--
i Manis_pentadactyla.KN017078.1                         I 1 I 8
s Marmota_marmota.CZRN01000005.1                         36878840 1 +  64221397 a--
i Marmota_marmota.CZRN01000005.1                        I 5 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       67102 1 -    234502 A--
i Megaderma_lyra.MegLyr_scaffold_3562                   I 5 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             7994 1 -     87323 A--
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 2829 1 +    115071 A--
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 I 1
s Mesocricetus_auratus.KB708139.1                         1052417 1 -  26018355 A--
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    3893 1 -     12939 A--
i Mesoplodon_bidens.MesBid_scaffold_96348               I 1 C 0
s Microcebus_murinus.CM007691.1                          16515049 1 +  47401472 A--
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  42077 1 -     48017 A--
i Microgale_talazaci.MicTal_scaffold_34660              I 2 I 4
s Micronycteris_hirsuta.MicHir_scaffold_37978               26420 1 -     32043 A--
i Micronycteris_hirsuta.MicHir_scaffold_37978           I 1 C 0
s Microtus_ochrogaster.CM001673.1                        22825422 1 -  98408828 A--
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8214590 1 +  10048721 A--
i Miniopterus_natalensis.LDJU01000022.1                 I 6 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            39048 1 +     45743 A--
i Miniopterus_schreibersii.MinSch_scaffold_24116        I 6 C 0
s Miopithecus_ogouensis.k141_2935907                         6779 3 +     29742 AAA
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        18342 1 -    104932 A--
i Mirounga_angustirostris.MirAng_flattened_line_8852    I 1 C 0
s Mirza_zaza.k141_593947                                     5732 1 -     12809 A--
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 151668 1 +    154973 A--
i Monodon_monoceros.MonMon_M_scaffold_5598              I 1 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                164936 1 +    265003 A--
i Mormoops_blainvillei.MorMeg_scaffold_2952             I 1 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  8470 1 -     19904 A--
i Moschus_moschiferus.MosMos_scaffold_78805             I 1 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  151824 1 -    168139 A--
i Mungos_mungo.MunMun_flattened_line_8729               I 1 C 0
s Murina_feae.MurFea_scaffold_2254                          25756 1 -    100666 A--
i Murina_feae.MurFea_scaffold_2254                      I 6 C 0
s Mus_caroli.LT608236.1                                  70772661 1 +  92629107 A--
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75494713 1 +  98207768 A--
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67561465 1 +  89017189 A--
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74337436 1 +  97876770 A--
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             15478 1 +     98495 A--
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 5 C 0
s Mustela_putorius.JH417978.1                             4430101 1 -  28371801 a--
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     96244 1 -    117718 T--
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               972770 1 +   8389877 A--
i Myotis_brandtii.KE161952.1                            I 6 C 0
s Myotis_davidii.KB114863.1                               5023846 1 +   6462685 A--
i Myotis_davidii.KB114863.1                             I 6 C 0
s Myotis_lucifugus.GL429887.1                             3470275 1 -   3747815 A--
i Myotis_lucifugus.GL429887.1                           I 6 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        15508 1 +     66751 A--
i Myotis_myotis.MyoMyo_scaffold_6123                    I 6 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             8262 1 -      8794 A--
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        I 2 I 3
s Nannospalax_galili.KL201303.1                            125160 1 +    362372 a--
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4491737 1 -  14209539 a--
i Neomonachus_schauinslandi.NINY01007774.1              I 1 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3956259 1 -   4490290 A--
i Neophocaena_asiaeorientalis.KZ688543.1                I 1 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  52250 1 +     94413 G--
i Noctilio_leporinus.NocLep_scaffold_12062              I 1 C 0
s Nomascus_annamensis.k141_762468                             845 2 -      2755 -AA
i Nomascus_annamensis.k141_762468                       C 0 C 0
s Nomascus_concolor.k141_256540                              7457 2 -      8966 -AA
i Nomascus_concolor.k141_256540                         C 0 C 0
s Nomascus_gabriellae.k141_1400361                           1396 2 -      2203 -AA
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_453                             6708 2 +     12787 -AA
i Nomascus_siki_b.tarseq_453                        C 0 C 0
s Nomascus_siki_a.k141_421408                                  1310 2 +     16235 -AA
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                39482 1 +   3668941 a--
i Nyctereutes_procyonoides.CAJHUB010000786.1            I 1 C 0
s Nycticebus_bengalensis.LG16                            65572523 1 -  95554990 A--
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_6040852                             160 1 +      1868 A--
i Nycticebus_coucang.k141_6040852                       I 2 I 135
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65680711 1 +  89412551 a--
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Octodon_degus.JH651621.1                                3691581 1 +  10294119 t--
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             686435 1 -   3126709 a--
i Odobenus_rosmarus.KB229369.1                          I 1 C 0
s Odocoileus_virginianus.KZ101650.1                       1085449 1 +   1425656 A--
i Odocoileus_virginianus.KZ101650.1                     I 1 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         43514 1 +     78940 A--
i Okapia_johnstoni.LVCL01S0017931.1                     I 1 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  131225 1 +    145789 a--
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  44140 1 +     62360 A--
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7229940 1 -   7562323 A--
i Orcinus_orca.KB316965.1                               I 1 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              64794 1 -     66828 A--
i Orycteropus_afer.OryAfe_flattened_line_13509          I 2 I 3
s Otocyon_megalotis.JAEUCK010005121.1                      316620 1 -    505867 a--
i Otocyon_megalotis.JAEUCK010005121.1                   I 1 C 0
s Otolemur_crassicaudatus.k141_505435                        5759 1 -     53940 A--
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18013728 1 -  38779656 A--
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134084706 1 - 275406953 A--
i Ovis_aries.CM001582.2                                 I 1 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      85944 1 +    140051 A--
i Ovis_canadensis.OviCan_scaffold_6251                  I 1 C 0
s Pan_paniscus.CM003386.1                               127579135 3 - 205426864 AAA
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120156295 3 - 196562556 AAA
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  41377 1 +    295523 A--
i Panthera_onca.PanOnc_flattened_line_1615              I 1 C 0
s Panthera_pardus.KV860323.1                              3645193 1 +  18214204 a--
i Panthera_pardus.KV860323.1                            I 1 C 0
s Panthera_tigris.KE721879.1                              5034834 1 -   6340057 a--
i Panthera_tigris.KE721879.1                            I 1 C 0
s Pantholops_hodgsonii.KE114631.1                         1073576 1 -   1292953 A--
i Pantholops_hodgsonii.KE114631.1                       I 1 C 0
s Papio_anubis.CM001492.2                               188161022 3 - 188283584 AAA
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              4112 3 +     25005 AAA
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47518394 3 +  47705337 AAA
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 72385 3 -    104429 AAA
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   10917 3 +     14967 AAA
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 6782 3 -      7628 AAA
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    122847 1 -    135482 A--
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 I 1 C 0
s Perodicticus_ibeanus.k141_117958                          11423 1 -     23713 A--
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           12574 1 +     61070 A--
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       2894 1 +     49596 A--
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615458.1                       2840007 1 -   3366660 A--
i Peromyscus_maniculatus.KI615458.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    17586 1 -     36578 C--
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              4400 1 +      8220 A--
i Phocoena_phocoena.PhoPho_flattened_line_53071         I 1 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306           101024 1 +    112873 C--
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        I 6 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990          10882 1 +     21690 A--
i Platanista_gangetica.PlaMin_flattened_line_72990      I 1 C 0
s Plecturocebus_bernhardi.k141_959214                       26716 3 +     44506 AAA
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        26929 3 +     67491 AAA
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      17168 3 -     98129 AAA
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     26769 3 +    147771 AAA
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         3404 3 -     43940 AAA
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          7487 3 -     55515 AAA
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         26841 3 +    152463 AAA
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       4649 3 -    119457 AAA
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         16563 3 +    134592 AAA
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          27151 3 -     75465 AAA
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              191766 3 -    373494 AAA
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19812413 3 +  19899266 AAA
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                4577 1 -      9567 A--
i Procavia_capensis.ProCapCap_scaffold_149274           I 2 C 0
s Prolemur_simus.MPIZ01000048.1                           6853389 1 +  12164890 A--
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     22198 1 -     30946 N--
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         8476 1 +     11805 A--
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           47810 1 +     52369 A--
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         40197 1 -     44753 A--
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            22120 1 +     27322 A--
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       21769 1 -     53241 A--
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         44032 1 -     48185 A--
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           39806 1 +     77221 a--
i Psammomys_obesus.NESX01026517.1                       C 0 I 1
s Pteronotus_parnellii.KE867983.1                            7588 1 -     27784 A--
i Pteronotus_parnellii.KE867983.1                       I 1 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        251744 1 -    344369 A--
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB030474.1                              8976782 1 -  19980961 A--
i Pteropus_alecto.KB030474.1                            I 8 I 29
s Pteropus_vampyrus.KN525959.1                             606346 1 -   3946241 a--
i Pteropus_vampyrus.KN525959.1                          I 6 C 0
s Puma_concolor.QAVW01000427.1                          131541312 1 - 161321710 a--
i Puma_concolor.QAVW01000427.1                          I 1 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                22293 1 +     68503 A--
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 1 C 0
s Rattus_norvegicus.chr11                                13918412 1 +  90463843 A--
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1794217 1 +   2252614 a--
i Rhinolophus_sinicus.LVEH01000179.1                    I 6 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                21742 1 +    109198 A--
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            I 6 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                      2973 1 -      4338 A--
i Saiga_tatarica.SaiTat_scaffold_371890                 I 1 C 0
s Saimiri_boliviensis.NW_024100938.1                     15677173 3 -  43202129 aaa
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        9086 3 +     34089 AAA
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              9026 3 -     60842 AAA
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              9120 3 +     67014 AAA
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              9097 3 +     60816 AAA
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 9034 3 -     76454 AAA
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17345819 3 -  30362882 AAA
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         25140 3 -     62485 AAA
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   41028 1 -    114521 A--
i Scalopus_aquaticus.ScaAqu_scaffold_9300               I 1 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  106308 1 -    120886 a--
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            25681 1 +    739146 A--
i Solenodon_paradoxus.SolPar_flattened_line_1012        I 1 C 0
s Sorex_araneus.JH798170.1                               17775820 1 -  27805282 A--
i Sorex_araneus.JH798170.1                              I 1 C 0
s Spermophilus_dauricus.KZ294190.1                        2244674 1 +   2842873 a--
i Spermophilus_dauricus.KZ294190.1                      I 5 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             240519 1 -    276980 A--
i Spilogale_gracilis.SpiGra_flattened_line_905          I 1 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            34714 1 +     62062 A--
i Suricata_suricatta.SurSur_flattened_line_20339        I 1 C 0
s Sus_scrofa.CM000824.4                                 189276719 1 + 218635234 A--
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        19433 2 -  13920577 -AA
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                3841 1 +     20549 A--
i Tadarida_brasiliensis.TadBra_scaffold_61492           I 6 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               17936 1 +     45698 A--
i Tamandua_tetradactyla.TamTet_scaffold_26877           I 2 I 3
s Tapirus_indicus.TapInd_scaffold_176                      812296 1 +   1148477 A--
i Tapirus_indicus.TapInd_scaffold_176                   I 1 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  62939 1 +     99546 A--
i Tapirus_terrestris.TapTer_scaffold_14939              I 1 C 0
s Theropithecus_gelada.CM009951.1                       194012555 3 - 194193292 AAA
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                  1119 1 -      3104 A--
i Tolypeutes_matacus.TolMat_scaffold_475685             I 2 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  139595 1 -    259118 A--
i Tonatia_saurophila.TonSau_scaffold_3334               I 1 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                  10281 1 +     90398 A--
i Tragulus_javanicus.TraJav_scaffold_14717              I 1 C 0
s Trichechus_manatus.JH594618.1                          16090467 1 +  31416278 A--
i Trichechus_manatus.JH594618.1                         I 2 C 0
s Tupaia_chinensis.KB320831.1                             2801736 1 -   3938065 C--
i Tupaia_chinensis.KB320831.1                           I 1 C 0
s Tupaia_tana.TupTan_flattened_line_68454                   10559 1 +     13056 A--
i Tupaia_tana.TupTan_flattened_line_68454               I 1 C 0
s Tursiops_truncatus.MRVK01000923.1                      69318670 1 -  96451834 A--
i Tursiops_truncatus.MRVK01000923.1                     I 1 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                    1416 1 +    136657 A--
i Uropsilus_gracilis.UroGra_scaffold_4115               I 1 C 0
s Ursus_maritimus.KK498671.1                              6522168 1 +  28682327 A--
i Ursus_maritimus.KK498671.1                            I 1 C 0
s Varecia_rubra.k141_432109                                 10035 1 -     20643 A--
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             29570 1 -     33872 A--
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1529700 1 -   2331223 a--
i Vicugna_pacos.KN269600.1                              I 6 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                145847 1 -    281493 A--
i Vulpes_lagopus.VulLag_flattened_line_2045             I 1 C 0
s Xerus_inauris.XerIna_scaffold_7898                       132169 1 -    134049 A--
i Xerus_inauris.XerIna_scaffold_7898                    I 5 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        221293 1 -    227762 A--
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_202118                     1851 1 -      3360 G--
i Zapus_hudsonius.ZapHud_scaffold_202118                C 0 I 5
s Ziphius_cavirostris.ZipCav_flattened_line_60625            3255 1 -     13665 A--
i Ziphius_cavirostris.ZipCav_flattened_line_60625       I 1 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Oryctolagus_cuniculus.CM000803.1                      141884639 0 + 163896628 C
e Ochotona_princeps.JH802095.1                            5000693 2 -  23139505 I
e Lepus_americanus.LepAme_scaffold_62849                    21623 0 +     22452 C
e Hylobates_pileatus_a.tarseq_592                             37267 2881 -     60944 I
e Trachypithecus_pileatus.k141_532233                       30126 0 -     40754 I
e Trachypithecus_phayrei.ctg364                            232455 0 -   1198723 I
e Trachypithecus_obscurus.k141_411399                         131 0 +     12010 I
e Trachypithecus_melamera.k141_950981                        2232 0 -      3512 I
e Trachypithecus_leucocephalus.k141_352489                   1214 0 +      9423 I
e Trachypithecus_laotum.k141_897381                         45646 0 -     53586 I
e Trachypithecus_hatinhensis.k141_641377                     1240 0 +      1365 I
e Trachypithecus_germaini.k141_240878                        5067 3 -     24955 I
e Trachypithecus_geei.k141_137495                           30106 0 -     42322 I
e Trachypithecus_francoisi.k141_1012484                       874 0 +      8809 I
e Trachypithecus_cristatus.k141_968903                      32589 3 +     43409 I
e Trachypithecus_crepusculus.k141_863597                     4944 0 -     23436 I
e Trachypithecus_auratus.k141_672638                         4947 3 +     38635 I
e Tarsius_wallacei.k141_48636                               64696 0 +     65473 C
e Tarsius_lariang.k141_609102                               31387 0 +     42269 C
e Semnopithecus_vetulus.k141_748269                          4706 0 +     17284 I
e Semnopithecus_schistaceus.k141_628310                     45652 0 -     53123 I
e Semnopithecus_priam.k141_368201                           10107 0 -     20692 I
e Semnopithecus_johnii.k141_1300894                          1368 0 +     13764 I
e Semnopithecus_hypoleucos.k141_2141024                      1351 0 -      8815 I
e Semnopithecus_entellus.k141_1743075                       45578 0 +     45790 I
e Rhinopithecus_strykeri.ctg241                            462135 0 +   1472273 I
e Rhinopithecus_bieti.k119_554384                            2917 0 -     17045 C
e Pygathrix_nigripes_a.k141_758202                             3050 0 -      8240 I
e Pygathrix_nigripes_b.ctg25                                14340869 0 -  15297009 I
e Pygathrix_cinerea.k141_951151                              3033 0 -      8225 I
e Presbytis_mitrata.k141_1767317                            10996 0 +     15869 I
e Presbytis_comata.k141_678168                              11007 0 +     11126 I
e Pithecia_vanzolinii.k141_831006                           15424 0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514 0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521 0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292 0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093 0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038 0 +     78826 C
e Pithecia_albicans.k141_991845                             45662 0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000342.1                3428480 0 -   4356645 I
e Piliocolobus_kirkii.k141_451083                            4879 0 -     13367 I
e Piliocolobus_gordonorum.k141_736355                       29715 0 +     67079 I
e Piliocolobus_badius.k141_512007                           29798 0 +     37672 I
e Nasalis_larvatus.k141_1382660                              4275 0 +      5784 I
e Ctenodactylus_gundi.CteGun_scaffold_447                  214856 0 -    956709 C
e Colobus_polykomos.k141_1178012                               88 3 -     11758 I
e Colobus_guereza.LG08                                   96946830 0 - 156195979 I
e Colobus_angolensis.KN983490.1                            283936 0 +    886210 I
e Cephalopachus_bancanus.k141_702587                        12545 0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530 0 +    345090 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               18161 1 +    209709 T
s Pan_paniscus.AJFE02000020.1                                 170 1 -      1352 t
i Pan_paniscus.AJFE02000020.1                           I 81 I 33
s Pan_troglodytes.NBAG03000771.1                           186096 1 +    210065 t
i Pan_troglodytes.NBAG03000771.1                        I 820 I 88
e Eptesicus_fuscus.JH977687.1                             4710448 0 +   6522550 C
e Macroglossus_sobrinus.MacSob_scaffold_4376               200500 24 +    248908 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Petromus_typicus.PetTyp_scaffold_33007                    17587 0 -     36578 C
e Sorex_araneus.JH798170.1                               17775821 0 -  27805282 C
e Dinomys_branickii.DinBra_scaffold_1996                   160450 0 +    228994 C
e Erinaceus_europaeus.JH835290.1                         11542977 0 +  16010500 C
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           5274 0 -      6963 C
e Aplodontia_rufa.AprRuf_scaffold_101456                     3130 0 +     11424 C
e Oryctolagus_cuniculus.CM000803.1                      141884639 0 + 163896628 C
e Ochotona_princeps.JH802095.1                            5000693 2 -  23139505 I
e Lepus_americanus.LepAme_scaffold_62849                    21623 0 +     22452 C
e Perognathus_longimembris.PerPac_flattened_line_19359       2895 0 +     49596 C
e Dipodomys_stephensi.DipSte_scaffold_84338                  3274 0 -     11986 C
e Dipodomys_ordii.KN672545.1                              3660900 0 +   4240102 C
e Suricata_suricatta.SurSur_flattened_line_20339            34715 0 +     62062 C
e Nomascus_siki_a.k141_421408                                  1312 0 +     16235 C
e Chrysochloris_asiatica.ChrAsi_scaffold_954668              1518 4 -      1738 I
e Ziphius_cavirostris.ZipCav_flattened_line_60625            3256 0 -     13665 C
e Zalophus_californianus.ZalCal_flattened_line_4097        221294 0 -    227762 C
e Vulpes_lagopus.VulLag_flattened_line_2045                145848 0 -    281493 C
e Vicugna_pacos.KN269600.1                                1529701 0 -   2331223 C
e Ursus_maritimus.KK498671.1                              6522169 0 +  28682327 C
e Uropsilus_gracilis.UroGra_scaffold_4115                    1417 0 +    136657 C
e Tursiops_truncatus.MRVK01000923.1                      69318671 0 -  96451834 C
e Trichechus_manatus.JH594618.1                          16090468 0 +  31416278 C
e Tragulus_javanicus.TraJav_scaffold_14717                  10282 0 +     90398 C
e Tonatia_saurophila.TonSau_scaffold_3334                  139596 0 -    259118 C
e Tolypeutes_matacus.TolMat_scaffold_475685                  1120 0 -      3104 C
e Tapirus_terrestris.TapTer_scaffold_14939                  62940 0 +     99546 C
e Tapirus_indicus.TapInd_scaffold_176                      812297 0 +   1148477 C
e Tamandua_tetradactyla.TamTet_scaffold_26877               17937 3 +     45698 I
e Tadarida_brasiliensis.TadBra_scaffold_61492                3842 0 +     20549 C
e Sus_scrofa.CM000824.4                                 189276720 0 + 218635234 C
e Spilogale_gracilis.SpiGra_flattened_line_905             240520 0 -    276980 C
e Solenodon_paradoxus.SolPar_flattened_line_1012            25682 0 +    739146 C
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   41029 0 -    114521 C
e Saiga_tatarica.SaiTat_scaffold_371890                      2974 0 -      4338 C
e Rousettus_aegyptiacus.RouAeg_scaffold_9606                21743 0 +    109198 C
e Rhinolophus_sinicus.LVEH01000179.1                      1794218 0 +   2252614 C
e Rangifer_tarandus.RanTarSib_scaffold_24239                22294 0 +     68503 C
e Puma_concolor.QAVW01000427.1                          131541313 0 - 161321710 C
e Pteropus_vampyrus.KN525959.1                             606347 0 -   3946241 C
e Pteropus_alecto.KB030474.1                              8976783 29 -  19980961 I
e Pteronura_brasiliensis.PteBra_flattened_line_1343        251745 0 -    344369 C
e Pteronotus_parnellii.KE867983.1                            7589 0 -     27784 C
e Procavia_capensis.ProCapCap_scaffold_149274                4578 0 -      9567 C
e Platanista_gangetica.PlaMin_flattened_line_72990          10883 0 +     21690 C
e Pipistrellus_pipistrellus.PipPip_scaffold_3306           101025 0 +    112873 C
e Phocoena_phocoena.PhoPho_flattened_line_53071              4401 0 +      8220 C
e Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    122848 0 -    135482 C
e Pantholops_hodgsonii.KE114631.1                         1073577 0 -   1292953 C
e Panthera_tigris.KE721879.1                              5034835 0 -   6340057 C
e Panthera_pardus.KV860323.1                              3645194 0 +  18214204 C
e Panthera_onca.PanOnc_flattened_line_1615                  41378 0 +    295523 C
e Ovis_canadensis.OviCan_scaffold_6251                      85945 0 +    140051 C
e Ovis_aries.CM001582.2                                 134084707 0 - 275406953 C
e Otocyon_megalotis.JAEUCK010005121.1                      316621 0 -    505867 C
e Orycteropus_afer.OryAfe_flattened_line_13509              64795 3 -     66828 I
e Orcinus_orca.KB316965.1                                 7229941 0 -   7562323 C
e Okapia_johnstoni.LVCL01S0017931.1                         43515 0 +     78940 C
e Odocoileus_virginianus.KZ101650.1                       1085450 0 +   1425656 C
e Odobenus_rosmarus.KB229369.1                             686436 0 -   3126709 C
e Nyctereutes_procyonoides.CAJHUB010000786.1                39483 0 +   3668941 C
e Noctilio_leporinus.NocLep_scaffold_12062                  52251 0 +     94413 C
e Neophocaena_asiaeorientalis.KZ688543.1                  3956260 0 -   4490290 C
e Neomonachus_schauinslandi.NINY01007774.1                4491738 0 -  14209539 C
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             8263 3 -      8794 I
e Myotis_myotis.MyoMyo_scaffold_6123                        15509 0 +     66751 C
e Myotis_lucifugus.GL429887.1                             3470276 0 -   3747815 C
e Myotis_davidii.KB114863.1                               5023847 0 +   6462685 C
e Myotis_brandtii.KE161952.1                               972771 0 +   8389877 C
e Mustela_putorius.JH417978.1                             4430102 0 -  28371801 C
e Murina_feae.MurFea_scaffold_2254                          25757 0 -    100666 C
e Mungos_mungo.MunMun_flattened_line_8729                  151825 0 -    168139 C
e Moschus_moschiferus.MosMos_scaffold_78805                  8471 0 -     19904 C
e Mormoops_blainvillei.MorMeg_scaffold_2952                164937 0 +    265003 C
e Monodon_monoceros.MonMon_M_scaffold_5598                 151669 0 +    154973 C
e Mirounga_angustirostris.MirAng_flattened_line_8852        18343 0 -    104932 C
e Miniopterus_schreibersii.MinSch_scaffold_24116            39049 0 +     45743 C
e Miniopterus_natalensis.LDJU01000022.1                   8214591 0 +  10048721 C
e Micronycteris_hirsuta.MicHir_scaffold_37978               26421 0 -     32043 C
e Microgale_talazaci.MicTal_scaffold_34660                  42078 4 -     48017 I
e Mesoplodon_bidens.MesBid_scaffold_96348                    3894 0 -     12939 C
e Mellivora_capensis.MelCap_flattened_line_15433             7995 0 -     87323 C
e Megaderma_lyra.MegLyr_scaffold_3562                       67103 0 -    234502 C
e Manis_pentadactyla.KN017078.1                             41207 8 +     58827 I
e Manis_javanica.JSZB01003966.1                            153605 0 +    252755 C
e Lycaon_pictus.CM007556.1                               11096614 0 +  39895028 C
e Loxodonta_africana.GL010040.1                          20599397 0 -  62548349 C
e Lipotes_vexillifer.KE558548.1                            141243 0 +   3060487 C
e Leptonychotes_weddellii.KB714749.1                      3092847 0 -   3498232 C
e Lasiurus_borealis.LasBor_scaffold_59542                    7015 0 +     26176 C
e Kogia_breviceps.KogBre_flattened_line_35920               28938 0 +     37189 C
e Inia_geoffrensis.IniGeo_flattened_line_66725              14303 0 +     17520 C
e Hyaena_hyaena.HyaHya_flattened_line_20729                 24526 0 -     67322 C
e Hipposideros_galeritus.HipGal_scaffold_52959               2850 13 +     26078 I
e Hipposideros_armiger.JXIK01001085.1                      285164 0 -    477199 C
e Hippopotamus_amphibius.HipAmp_scaffold_1308              152130 0 +    277961 C
e Heterohyrax_brucei.HetBruBak_scaffold_25354               63472 0 +     73687 C
e Hemitragus_hylocrius.HemHyl_scaffold_16669                34922 0 -     91191 C
e Helogale_parvula.HelPar_flattened_line_22962              24086 0 +     53719 C
e Giraffa_tippelskirchi.LVKQ01S012154.1                    187792 0 -    189561 C
e Felis_nigripes.FelNig_flattened_line_8080                 28456 0 +     52776 C
e Felis_catus_fca126.CM031420.1                         129287353 0 - 158578461 C
e Eubalaena_japonica.EubJap_flattened_line_7756             66779 0 +     89355 C
e Eschrichtius_robustus.EscRob_flattened_line_685          320323 0 +    330699 C
e Equus_przewalskii.ATBW01073585.1                          17798 0 +     92910 C
e Equus_caballus.CM000402.2                              13356308 0 +  41866177 C
e Equus_asinus.JREZ01000062.1                             5857822 0 -   7175178 C
e Enhydra_lutris.KZ291749.1                              85878901 0 +  99434291 C
e Elephantulus_edwardii.JH947210.1                        7834764 3 +  15467074 I
e Elaphurus_davidianus.JRFZ01086400.1                     1498012 0 +   1727528 C
e Eidolon_helvum.AWHC01235761.1                              3560 0 -      8619 C
e Echinops_telfairi.JH980316.1                           23000510 4 -  44670279 I
e Diceros_bicornis.DicBicMic_scaffold_9545                   8596 0 +    151128 C
e Dicerorhinus_sumatrensis.PEKH010003161.1                 327962 0 +    993696 C
e Desmodus_rotundus.PEHR01015603.1                            367 0 +       472 C
e Delphinapterus_leucas.KZ290064.1                       80042076 0 -  96802777 C
e Dasypus_novemcinctus.JH568778.1                          186320 0 -   6883506 C
e Cryptoprocta_ferox.CryFer_flattened_line_19014            58970 0 -     70449 C
e Crocidura_indochinensis.CroInd_scaffold_27484              3485 0 -     22648 C
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         3988 0 -      5782 C
e Condylura_cristata.JH655880.1                          60623595 0 +  78930452 C
e Choloepus_hoffmanni.KN194586.1                           764593 3 +    964067 I
e Choloepus_didactylus.ChoDid_scaffold_36182                19289 3 -     21363 I
e Ceratotherium_simum_cottoni.CerCot_scaffold_160623         9320 0 -      9338 C
e Catagonus_wagneri.CatWag_scaffold_1305                   164328 0 -    276539 C
e Carollia_perspicillata.CarPer_scaffold_4436               63467 0 +     67245 C
e Capra_hircus.CM004562.1                               135713884 0 - 157403528 C
e Capra_aegagrus.CM003214.1                              21335531 0 + 157394656 C
e Canis_lupus_orion.HG994411.1                           16463943 0 -  44759192 C
e Canis_lupus_familiaris.chr31                           11097158 0 +  39895921 C
e Canis_lupus_dingo.QKWQ01001993.1                       11274661 0 -  35597290 C
e Canis_lupus_VD.CanFam_VD_scaffold_16982                   22738 0 +     87036 C
e CanFam4.chr31                                          11527764 0 +  39901454 C
e Camelus_ferus.KB016973.1                                2978031 0 +   6889770 C
e Camelus_dromedarius.KN271192.1                           402293 0 -  15254737 C
e Camelus_bactrianus.KN276303.1                           3224593 0 -   8989139 C
e Bubalus_bubalis.KI419065.1                               676613 0 +   1914593 C
e Bos_taurus.CM000177.6                                  22667774 0 + 158972876 C
e Bos_mutus.JH883513.1                                     421302 0 +    998990 C
e Bos_indicus.CM003021.1                                 22959122 0 + 161108492 C
e Bison_bison.KN264915.1                                   305017 0 -   6870073 C
e Beatragus_hunteri.BeaHun_scaffold_21644                   50067 0 -     72089 C
e Balaenoptera_bonaerensis.DF502048.1                       10652 0 -     13118 C
e Balaenoptera_acutorostrata.KI537095.1                  26385479 0 +  51448160 C
e Artibeus_jamaicensis.ArtJam_scaffold_41619                12473 0 -     29036 C
e Antilocapra_americana.AntAmePen_scaffold_27338             5259 0 +     55446 C
e Anoura_caudifer.AnoCau_scaffold_422                      394185 0 -    631301 C
e Ammotragus_lervia.NIVO01013474.1                        3528098 0 +   4113121 C
e Ailurus_fulgens.LNAC01000003.1                          7101854 0 -  16596857 C
e Ailuropoda_melanoleuca.LNAT01000321.1                  10664901 0 +  23371972 C
e Acinonyx_jubatus.LLWD01000356.1                         2040958 0 +   3721120 C
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           21842 0 -    119109 C
e Glis_glis.GliGli_scaffold_79770                           17071 0 -     18683 C
e Zapus_hudsonius.ZapHud_scaffold_202118                     1852 5 -      3360 I
e Jaculus_jaculus.JH725517.1                              8579770 5 +  11848649 I
e Hylobates_pileatus_a.tarseq_592                             37267 2881 -     60944 I
e Hylobates_pileatus_b.ContigUN                                 14629176 0 -  25970782 C
e Allactaga_bullata.AllBul_scaffold_141108                   2023 5 -      7259 I
e Hylobates_muelleri.k141_1139146                            1728 0 +      4161 C
e Hylobates_klossii.k141_468230                              3830 0 +      5464 C
e Hylobates_agilis.k141_1136966                               350 0 +      9785 C
e Hylobates_abbotti.k141_1816750                             2341 0 +      3202 C
e Galeopterus_variegatus.GalVar_scaffold_354               160175 0 +    324696 C
e Microtus_ochrogaster.CM001673.1                        22825423 0 -  98408828 C
e Xerus_inauris.XerIna_scaffold_7898                       132170 0 -    134049 C
e Varecia_variegata.k141_775891                             29571 0 -     33872 C
e Varecia_rubra.k141_432109                                 10036 0 -     20643 C
e Tupaia_tana.TupTan_flattened_line_68454                   10560 0 +     13056 C
e Tupaia_chinensis.KB320831.1                             2801737 0 -   3938065 C
e Trachypithecus_pileatus.k141_532233                       30126 0 -     40754 I
e Trachypithecus_phayrei.ctg364                            232455 0 -   1198723 I
e Trachypithecus_obscurus.k141_411399                         131 0 +     12010 I
e Trachypithecus_melamera.k141_950981                        2232 0 -      3512 I
e Trachypithecus_leucocephalus.k141_352489                   1214 0 +      9423 I
e Trachypithecus_laotum.k141_897381                         45646 0 -     53586 I
e Trachypithecus_hatinhensis.k141_641377                     1240 0 +      1365 I
e Trachypithecus_germaini.k141_240878                        5067 3 -     24955 I
e Trachypithecus_geei.k141_137495                           30106 0 -     42322 I
e Trachypithecus_francoisi.k141_1012484                       874 0 +      8809 I
e Trachypithecus_cristatus.k141_968903                      32589 3 +     43409 I
e Trachypithecus_crepusculus.k141_863597                     4944 0 -     23436 I
e Trachypithecus_auratus.k141_672638                         4947 3 +     38635 I
e Theropithecus_gelada.CM009951.1                       194012558 0 - 194193292 C
e Tarsius_wallacei.k141_48636                               64696 0 +     65473 C
e Tarsius_lariang.k141_609102                               31387 0 +     42269 C
e Spermophilus_dauricus.KZ294190.1                        2244675 0 +   2842873 C
e Sigmodon_hispidus.SigHis_scaffold_11332                  106309 0 -    120886 C
e Semnopithecus_vetulus.k141_748269                          4706 0 +     17284 I
e Semnopithecus_schistaceus.k141_628310                     45652 0 -     53123 I
e Semnopithecus_priam.k141_368201                           10107 0 -     20692 I
e Semnopithecus_johnii.k141_1300894                          1368 0 +     13764 I
e Semnopithecus_hypoleucos.k141_2141024                      1351 0 -      8815 I
e Semnopithecus_entellus.k141_1743075                       45578 0 +     45790 I
e Sapajus_macrocephalus.k141_966464                         25143 0 -     62485 C
e Sapajus_apella.ctg10                                   17345822 0 -  30362882 C
e Saimiri_ustus.k141_1282476                                 9037 0 -     76454 C
e Saimiri_sciureus.k141_1947592                              9100 0 +     60816 C
e Saimiri_oerstedii.k141_841116                              9123 0 +     67014 C
e Saimiri_macrodon.k141_2087127                              9029 0 -     60842 C
e Saimiri_cassiquiarensis.k141_808270                        9089 0 +     34089 C
e Saimiri_boliviensis.NW_024100938.1                     15677176 0 -  43202129 C
e Rhinopithecus_strykeri.ctg241                            462135 0 +   1472273 I
e Rhinopithecus_bieti.k119_554384                            2917 0 -     17045 C
e Rattus_norvegicus.chr11                                13918413 0 +  90463843 C
e Pygathrix_nigripes_a.k141_758202                             3050 0 -      8240 I
e Pygathrix_nigripes_b.ctg25                                14340869 0 -  15297009 I
e Pygathrix_cinerea.k141_951151                              3033 0 -      8225 I
e Psammomys_obesus.NESX01026517.1                           39807 1 +     77221 I
e Propithecus_verreauxi.k141_158021                         44033 0 -     48185 C
e Propithecus_tattersalli.k141_907138                       21770 0 -     53241 C
e Propithecus_perrieri.k141_7554                            22121 0 +     27322 C
e Propithecus_edwardsi.k141_1317105                         40198 0 -     44753 C
e Propithecus_diadema.k141_577245                           47811 0 +     52369 C
e Propithecus_coronatus.k141_1353159                         8477 0 +     11805 C
e Propithecus_coquerelli.NW_012147863.1                     22199 0 -     30946 C
e Prolemur_simus.MPIZ01000048.1                           6853390 0 +  12164890 C
e Presbytis_mitrata.k141_1767317                            10996 0 +     15869 I
e Presbytis_comata.k141_678168                              11007 0 +     11126 I
e Plecturocebus_moloch.k141_890597                          27154 0 -     75465 C
e Plecturocebus_miltoni.k141_841561                         16566 0 +    134592 C
e Plecturocebus_hoffmannsi.k141_985533                       4652 0 -    119457 C
e Plecturocebus_grovesi.k141_242819                         26844 0 +    152463 C
e Plecturocebus_dubius.k141_3565563                          7490 0 -     55515 C
e Plecturocebus_cupreus.k141_1145860                         3407 0 -     43940 C
e Plecturocebus_cinerascens.k141_744510                     26772 0 +    147771 C
e Plecturocebus_caligatus.k141_2539816                      17171 0 -     98129 C
e Plecturocebus_brunneus.k141_498086                        26932 0 +     67491 C
e Plecturocebus_bernhardi.k141_959214                       26719 0 +     44506 C
e Pithecia_vanzolinii.k141_831006                           15424 0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514 0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521 0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292 0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093 0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038 0 +     78826 C
e Pithecia_albicans.k141_991845                             45662 0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000342.1                3428480 0 -   4356645 I
e Piliocolobus_kirkii.k141_451083                            4879 0 -     13367 I
e Piliocolobus_gordonorum.k141_736355                       29715 0 +     67079 I
e Piliocolobus_badius.k141_512007                           29798 0 +     37672 I
e Peromyscus_maniculatus.KI615458.1                       2840008 0 -   3366660 C
e Perodicticus_potto.k141_1136815                           12575 0 +     61070 C
e Perodicticus_ibeanus.k141_117958                          11424 0 -     23713 C
e Papio_ursinus.k141_1345919                                 6785 0 -      7628 C
e Papio_papio.k141_979496                                   10920 0 +     14967 C
e Papio_kindae.k141_5458022                                 72388 0 -    104429 C
e Papio_hamadryas.Contig15                               47518397 0 +  47705337 C
e Papio_cynocephalus.k141_45376                              4115 0 +     25005 C
e Papio_anubis.CM001492.2                               188161025 0 - 188283584 C
e Otolemur_garnettii.GL873528.1                          18013729 0 -  38779656 C
e Otolemur_crassicaudatus.k141_505435                        5760 0 -     53940 C
e Onychomys_torridus.OnyTor_scaffold_12578                  44141 0 +     62360 C
e Ondatra_zibethicus.OndZib_scaffold_6821                  131226 0 +    145789 C
e Octodon_degus.JH651621.1                                3691582 0 +  10294119 C
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65680712 0 +  89412551 C
e Nycticebus_coucang.k141_6040852                             161 135 +      1868 I
e Nycticebus_bengalensis.LG16                            65572524 0 -  95554990 C
e Nasalis_larvatus.k141_1382660                              4275 0 +      5784 I
e Nannospalax_galili.KL201303.1                            125161 0 +    362372 C
e Myocastor_coypus.MyoCoy_scaffold_3653                     96245 0 -    117718 C
e Muscardinus_avellanarius.MusAve_scaffold_9643             15479 0 +     98495 C
e Mus_spretus.CM004110.1                                 74337437 0 +  97876770 C
e Mus_pahari.LT608305.1                                  67561466 0 +  89017189 C
e Mus_musculus.chr16                                     75494714 0 +  98207768 C
e Mus_caroli.LT608236.1                                  70772662 0 +  92629107 C
e Mirza_zaza.k141_593947                                     5733 0 -     12809 C
e Miopithecus_ogouensis.k141_2935907                         6782 0 +     29742 C
e Microcebus_murinus.CM007691.1                          16515050 0 +  47401472 C
e Mesocricetus_auratus.KB708139.1                         1052418 0 -  26018355 C
e Meriones_unguiculatus.MerUng_scaffold_9483                 2830 1 +    115071 I
e Marmota_marmota.CZRN01000005.1                         36878841 0 +  64221397 C
e Mandrillus_sphinx.Contig144                             4455040 0 -   4543643 C
e Mandrillus_leucophaeus.scaffold125                     43442236 0 -  43563597 C
e Macaca_tonkeana.k141_2870633                               9200 0 -     27140 C
e Macaca_thibetana.k99_662710                               21830 0 -     24607 C
e Macaca_silenus.Contig12                                43845661 0 +  43892939 C
e Macaca_siberu.k141_741907                                 20546 0 -     55006 C
e Macaca_radiata.k141_3680256                                6866 0 -     13212 C
e Macaca_nigra.k141_282495                                   9203 0 -     46448 C
e Macaca_nemestrina.KQ004885.1                           11450517 0 +  11645122 C
e Macaca_mulatta.NC_041755.1                            196040347 0 + 196197964 C
e Macaca_maura.k141_251854                                  50249 0 -     79256 C
e Macaca_leonina.k141_467472                                 7020 0 -      7381 C
e Macaca_fuscata.k119_938422                                 3830 0 -     26361 C
e Macaca_fascicularis.k141_155037                           51720 0 +     63263 C
e Macaca_cyclopis.k119_883699                                3849 0 -     26467 C
e Macaca_assamensis.Contig65                             12711276 0 +  12821369 C
e Macaca_arctoides.k141_2201161                             24815 0 +     74745 C
e Loris_tardigradus.ctg97                                 3783599 0 +   6799190 C
e Loris_lydekkerianus.k141_550999                           15861 0 +     84689 C
e Lophocebus_aterrimus.ctg55                             19253064 0 +  19376315 C
e Lepilemur_septentrionalis.k141_710646                      3115 0 -     13103 C
e Lepilemur_ruficaudatus.k141_574529                        37069 0 -     38897 C
e Lepilemur_dorsalis.k141_134267                            58689 0 +     63517 C
e Lepilemur_ankaranensis.k141_884009                        29325 0 +     39228 C
e Lemur_catta.scaffold_1                                258412019 0 - 285822530 C
e Lagothrix_lagothricha.k141_12968                          54629 0 -    147782 C
e Indri_indri.k141_2197838                                   2187 0 +      3484 C
e Ictidomys_tridecemlineatus.JH393315.1                   7130974 0 +  13083262 C
e Hystrix_cristata.HysCri_scaffold_50788                    10137 0 +     22540 C
e Heterocephalus_glaber.JH602058.1                        2561244 0 +  31725842 C
e Hapalemur_occidentalis.k141_797938                        50341 0 -     54384 C
e Hapalemur_meridionalis.k141_186231                        33718 0 -     42470 C
e Hapalemur_griseus.k141_1387522                            10469 0 +     56096 C
e Hapalemur_gilberti.k141_279011                             5142 0 -     11661 C
e Hapalemur_alaotrensis.k141_1280836                         6664 0 +     10286 C
e Graphiurus_murinus.GraMur_scaffold_4493                   80387 0 +    118900 C
e Galagoides_demidoff.k141_1769638                          15403 0 +     27357 C
e Galago_senegalensis.k141_964197                           18259 0 -     43889 C
e Galago_moholi.ctg555                                     215898 0 -    847004 C
e Fukomys_damarensis.KN123630.1                          13896747 0 -  19261668 C
e Eulemur_sanfordi.k141_186399                              20665 0 -     29447 C
e Eulemur_rufus.k141_1620292                                37924 0 +     46535 C
e Eulemur_rubriventer.k141_411740                           23192 0 +     26808 C
e Eulemur_mongoz.k141_825972                                20736 0 +     27497 C
e Eulemur_macaco.k141_747087                                 4061 0 -     19505 C
e Eulemur_fulvus.k141_653297                                16078 0 +    109717 C
e Eulemur_flavifrons.k141_903901                            12593 0 +     60246 C
e Eulemur_coronatus.k141_3240342                            16271 0 +     36558 C
e Eulemur_collaris.k141_1015201                              3134 0 -      4292 C
e Eulemur_albifrons.k141_715837                              9875 0 +     13586 C
e Erythrocebus_patas.Contig8                             48781443 0 -  48907691 C
e Ellobius_talpinus.LOJH01076532.1                            942 0 +      9159 C
e Ellobius_lutescens.LOEQ01003611.1                        244598 0 -    369425 C
e Dolichotis_patagonum.DolPat_scaffold_14102                41175 0 -     73477 C
e Daubentonia_madagascariensis.ctg11                     16849731 0 +  31942871 C
e Dasyprocta_punctata.DasPun_flattened_line_634             62606 0 -    236241 C
e Cuniculus_paca.CunPac_flattened_line_16637                21466 0 +     26546 C
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 36528 0 -     67205 C
e Ctenodactylus_gundi.CteGun_scaffold_447                  214856 0 -    956709 C
e Cricetulus_griseus.LT883672.1                          53035855 0 +  72327488 C
e Cricetomys_gambianus.CriGam_scaffold_949                 283554 0 -    399297 C
e Colobus_polykomos.k141_1178012                               88 3 -     11758 I
e Colobus_guereza.LG08                                   96946830 0 - 156195979 I
e Colobus_angolensis.KN983490.1                            283936 0 +    886210 I
e Chlorocebus_sabaeus.CM001963.2                        101149433 0 + 101219884 C
e Chlorocebus_pygerythrus.k141_1486215                      38874 0 -     53260 C
e Chlorocebus_aethiops.ctg22                             15144410 0 -  15256731 C
e Chiropotes_sagulatus.k141_773804                          19769 0 +     40510 C
e Chiropotes_israelita.k141_1189915                         75588 0 +    196370 C
e Chinchilla_lanigera.JH721867.1                         15964973 0 +  43084221 C
e Cheracebus_torquatus.k141_315545                          50787 0 +     54541 C
e Cheracebus_regulus.k141_2128895                           46107 0 +     57117 C
e Cheracebus_lugens.k141_996499                              1808 0 +    188999 C
e Cheracebus_lucifer.k141_619653                            10070 0 -     18223 C
e Cheirogaleus_medius.k141_133808                           12899 0 +     13308 C
e Cheirogaleus_major.k141_1157592                           63779 0 -     68416 C
e Cercopithecus_roloway.k141_2263608                        26225 0 +     37128 C
e Cercopithecus_pogonias.k141_3109732                        6856 0 -     17744 C
e Cercopithecus_petaurista.k141_64532                        6684 0 -     25661 C
e Cercopithecus_nictitans.k141_1129315                       6890 0 +     35577 C
e Cercopithecus_neglectus.k141_2169300                        690 0 -     27215 C
e Cercopithecus_mona.ctg12                               46482573 0 +  46592721 C
e Cercopithecus_albogularis.ctg51                              11995597 0 +  12117833 C
e Cercopithecus_lowei.k141_623764                           29066 0 +     35983 C
e Cercopithecus_hamlyni.k141_129805                          6876 0 +     16677 C
e Cercopithecus_diana.k141_2561715                           4270 0 +     15177 C
e Cercopithecus_cephus.k141_3893260                          3994 0 +     45019 C
e Cercopithecus_ascanius.k141_4123525                        6829 0 -     17608 C
e Cercocebus_torquatus.k141_3969582                         63966 0 -    107033 C
e Cercocebus_lunulatus.k141_4634644                          6656 0 -     21101 C
e Cercocebus_chrysogaster.k141_2328246                      31452 0 +     60454 C
e Cercocebus_atys.KQ010443.1                              6559975 0 +   6739814 C
e Cephalopachus_bancanus.k141_702587                        12545 0 +     21754 C
e Cebus_unicolor.k141_239009                                17028 0 +     25043 C
e Cebus_olivaceus.k141_93739                                12784 0 -     26817 C
e Cebus_albifrons.Contig22                               18896134 0 -  29618158 C
e Cavia_tschudii.CavTsc_scaffold_488                       180389 0 +    436027 C
e Cavia_porcellus.DS562889.1                             15802217 0 -  24440124 C
e Cavia_aperea.AVPZ01000278.1                            15790278 0 -  24422027 C
e Castor_canadensis.CasCan_scaffold_1326                      583 0 -    202837 C
e Carlito_syrichta.NW_007248099.1                          313530 0 +    345090 C
e Capromys_pilorides.CapPil_scaffold_780116                   142 0 +      1571 C
e Cacajao_melanocephalus.k141_1160263                       12017 0 -    134917 C
e Cacajao_hosomi.k141_303789                                19474 0 -    216513 C
e Cacajao_calvus.k141_96166                                 17427 0 +    125063 C
e Cacajao_ayresi.k141_724503                               118407 0 -    171031 C
e Avahi_peyrierasi.k141_798820                               5185 0 +      6337 C
e Avahi_laniger.k141_2840928                                11569 0 -     16375 C
e Ateles_paniscus.k141_1631200                              10509 0 -     25888 C
e Ateles_marginatus.k141_899112                             68540 0 +    119057 C
e Ateles_geoffroyi_a.k141_1300742                             20546 0 -     58268 C
e Ateles_chamek.k141_1072810                                16045 0 +     89302 C
e Ateles_belzebuth.k141_1348307                             65032 0 +     85812 C
e Ateles_geoffroyi_b.tarseq_2582                             9543758 0 +  39197703 C
e Arctocebus_calabarensis.k141_587554                        7046 0 +      9265 C
e Aotus_vociferans.k141_718647                              10471 0 +     23246 C
e Aotus_trivirgatus.k141_1740727                            10464 0 -    104377 C
e Aotus_nancymaae.KZ196176.1                              5753865 0 +   9889416 C
e Aotus_griseimembra.k141_3275623                            9898 0 +     22701 C
e Aotus_azarae.k141_3170768                                 66954 0 +     78111 C
e Alouatta_seniculus.k141_790278                             5347 0 -      9835 C
e Alouatta_puruensis.k141_1602819                            1202 0 -      1470 C
e Alouatta_palliata.k141_405616                              6070 0 +     16794 C
e Alouatta_nigerrima.k141_494922                              156 0 -      8325 C
e Alouatta_macconnelli.k141_2318944                          3652 0 -     24210 C
e Alouatta_juara.k141_799181                                  913 0 -      1641 C
e Alouatta_discolor.k141_2023149                             1168 0 +      5070 C
e Alouatta_caraya.k141_664908                                3869 0 -     12443 C
e Alouatta_belzebul.k141_276091                              1625 0 +     19852 C
e Allochrocebus_solatus.k141_371672                          6645 0 -     80423 C
e Allochrocebus_preussi.k141_1108977                         5689 0 +     38766 C
e Allochrocebus_lhoesti.k141_3566948                         6751 0 -     29318 C
e Allenopithecus_nigroviridis.k141_2469532                   6035 0 -     60446 C
e Acomys_cahirinus.AcoCah_scaffold_1625                    118650 0 -    189883 C
e Nomascus_siki_b.tarseq_453                             6710 0 +     12787 C
e Nomascus_annamensis.k141_762468                             847 0 -      2755 C
e Symphalangus_syndactylus.tarseq_24                        19435 0 -  13920577 C
e Pongo_pygmaeus.ctg62                                   19812416 0 +  19899266 C
e Pongo_abelii.NDHI03003816.1                              191769 0 -    373494 C
e Nomascus_gabriellae.k141_1400361                           1398 0 -      2203 C
e Nomascus_concolor.k141_256540                              7459 0 -      8966 C
e Hoolock_leuconedys.ctg79                                      9770 0 -   7690867 C
e Gorilla_gorilla.LT578340.1                            119656959 0 - 195582420 C
e Gorilla_beringei.k141_111300                               9859 0 -     14630 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               18162 26 +    209709 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCATTG
s Acinonyx_jubatus.LLWD01000356.1                         2040958 26 +   3721120 gttt-gctgATG------------A----------------------A----T----------------C-T----------------TCAATTACTG
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    118650 26 -    189883 GTCT-GCTGAAT------------G----------------------A----A----------------C-A----------------TCCATTTTTG
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10664901 26 +  23371972 GTTT-GTTGATG------------G----------------------A----C----------------C-T----------------TCAATTCTTG
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7101854 26 -  16596857 gttt-gttgtTG------------G----------------------A----C----------------C-T----------------TCAATTATTG
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_141108                   2028 13 -      7259 ----------------------------------------------------C----------------C-T----------------TCCATTTCTG
i Allactaga_bullata.AllBul_scaffold_141108              I 5 C 0
s Allenopithecus_nigroviridis.k141_2469532                   6035 26 -     60446 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCGTTG
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         6751 26 -     29318 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCGTTG
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         5689 26 +     38766 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCGTTG
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          6645 26 -     80423 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCGTTG
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              1625 25 +     19852 CTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACC-TTG
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                3869 25 -     12443 CTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACC-TTG
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                             1168 25 +      5070 CTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACC-TTG
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                  913 25 -      1641 CTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACC-TTG
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          3652 25 -     24210 CTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACC-TTG
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_494922                              156 25 -      8325 CTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACC-TTG
i Alouatta_nigerrima.k141_494922                        C 0 C 0
s Alouatta_palliata.k141_405616                              6070 25 +     16794 CTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACC-TTG
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                            1202 25 -      1470 CTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACC-TTG
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             5347 25 -      9835 CTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACC-TTG
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3528098 26 +   4113121 GTTT-GTTGACT------------G----------------------A----T----------------C-T----------------TCAATCACTG
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      394185 26 -    631301 GTTT-GTTGACA------------G----------------------A----C----------------C-T----------------TCAACCATTG
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             5259 26 +     55446 GTTT-GTTGACT------------G----------------------A----T----------------C-T----------------CCAACCATTG
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 66954 26 +     78111 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCATTG
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            9898 26 +     22701 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCATTG
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5753865 26 +   9889416 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCATTG
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                            10464 26 -    104377 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCATTG
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                              10471 26 +     23246 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCATTG
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     3130 26 +     11424 AAAT-TATTGCC------------A----------------------A----C----------------C-T----------------TCAATTATGG
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        7046 26 +      9265 GTTT-GCTAACT------------G----------------------A----C----------------C-T----------------TCAAACATTG
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                12473 26 -     29036 GTTT-GTTGTCA------------G----------------------A----C----------------C-T----------------TCAACCATTG
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9543758 24 +  39197703 CTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCA--CATTG
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             65032 24 +     85812 CTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCA--CATTG
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                16045 24 +     89302 CTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCA--CATTG
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             20546 24 -     58268 CTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCA--CATTG
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             68540 24 +    119057 CTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCA--CATTG
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              10509 24 -     25888 CTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCA--CATTG
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                11569 33 -     16375 GTTT-GTTAACT------------G----------------------A----CCTTCAAACATTGAGATC-T----------------T---------
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               5185 33 +      6337 GTTT-GTTAACT------------G----------------------A----CCTTCAAACATTGAGATC-T----------------T---------
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26385479 26 +  51448160 GTTT-GTTGACT------------G----------------------A----C----------------T-T----------------TCAACCATTG
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                       10652 26 -     13118 GTTT-GTTGACT------------G----------------------A----C----------------T-T----------------TCAACCATTG
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   50067 26 -     72089 GTTT-GTTGACT------------G----------------------A----T----------------C-T----------------TCAACCATTA
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   305017 26 -   6870073 GTTT-TTTTACT------------G----------------------A----T----------------C-T----------------TCAACCATTG
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22959122 27 + 161108492 GTTTTTTTTACT------------G----------------------A----T----------------C-T----------------TCAACCATTG
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     421302 26 +    998990 GTTT-TTTTACT------------G----------------------A----T----------------C-T----------------TCAACCATTG
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22667774 27 + 158972876 GTTTTTTTTACT------------G----------------------A----T----------------C-T----------------TCAACCATTG
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               676613 26 +   1914593 GTTT-GTTTACT------------G----------------------A----T----------------C-T----------------TCAACCATTG
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               118407 26 -    171031 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCATTG
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 17427 26 +    125063 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCATTG
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                19474 26 -    216513 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCATTG
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       12017 26 -    134917 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCATTG
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3224593 26 -   8989139 gttt-gtTGATT------------G----------------------A----C----------------C-T----------------TCAATCGTTG
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           402293 26 -  15254737 gttt-gtTGATT------------G----------------------A----C----------------C-T----------------TCAATCGTTG
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2978031 26 +   6889770 gttt-gtTGATT------------G----------------------A----C----------------C-T----------------TCAATCGTTG
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11527764 26 +  39901454 GTTT-GTTGATG------------G----------------------A----C----------------C-T----------------TCAATTATTG
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   22738 26 +     87036 GTTT-GTTGATG------------G----------------------A----C----------------C-T----------------TCAATTATTG
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11274661 26 -  35597290 gttt-gttgatG------------G----------------------A----C----------------C-T----------------TCAATTATTG
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11097158 26 +  39895921 gttt-gttgatG------------G----------------------A----C----------------C-T----------------TCAATTATTG
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16463943 26 -  44759192 gttt-gttgatG------------G----------------------A----C----------------C-T----------------TCAATTATTG
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21335531 26 + 157394656 GTTT-GTTGACT------------G----------------------A----T----------------C-T----------------TCAACCATTG
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135713884 26 - 157403528 GTTT-GTTGACT------------G----------------------A----T----------------C-T----------------TCAACCATTG
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_780116                   142 26 +      1571 ATTT-ATTGACT------------G----------------------A----T----------------G-T----------------TTGATTACAG
i Capromys_pilorides.CapPil_scaffold_780116             C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               63467 26 +     67245 GTTT-CTTGACA------------G----------------------A----C----------------C-T----------------TCAACCATTG
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_1326                      583 26 -    202837 GTTT-GTTGACT------------G----------------------A----T----------------C-T----------------TAAGTTATTG
i Castor_canadensis.CasCan_scaffold_1326                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   164328 26 -    276539 GTTT-GTTGACT------------G----------------------A----C----------------C-T----------------TCAACCATTG
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15790278 26 -  24422027 aTTT-GTTGACT------------G----------------------A----T----------------A-T----------------TTGATTATAG
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15802217 26 -  24440124 attt-gttgact------------g----------------------a----T----------------A-T----------------TTGATTATAG
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       180389 26 +    436027 ATTT-GTTGACT------------G----------------------A----T----------------A-T----------------TTGATTATAG
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18896134 26 -  29618158 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCATTG
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                12784 26 -     26817 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCATTG
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                17028 26 +     25043 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCATTG
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4369563 26 +   7569818 gttt-gctgatc------------a----------------------G----C----------------C-T----------------TCAACCATTG
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_160623         9320 18 -      9338 GTTT-GCTGATC------------A----------------------A----C----------------C-T----------------TC--------
i Ceratotherium_simum_cottoni.CerCot_scaffold_160623    C 0 N 0
s Cercocebus_atys.KQ010443.1                              6559975 26 +   6739814 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCGTTG
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      31452 26 +     60454 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCGTTG
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          6656 26 -     21101 GTTT-GTTAACT------------G----------------------A----C----------------T-T----------------TCAACCGTTG
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         63966 26 -    107033 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCGTTG
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        6829 26 -     17608 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCGTTG
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          3994 26 +     45019 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCGTTG
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           4270 26 +     15177 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCGTTG
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          6876 26 +     16677 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCGTTG
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           29066 26 +     35983 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCGTTG
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11995597 26 +  12117833 GTTT-GTTAACT------------G----------------------G----C----------------C-T----------------TCAACCGTTG
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46482573 26 +  46592721 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCGTTG
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                        690 26 -     27215 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCGTTG
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       6890 26 +     35577 GTTT-GTTAACT------------G----------------------G----C----------------C-T----------------TCAACCGTTG
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        6684 26 -     25661 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCGTTG
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        6856 26 -     17744 GTTT-GTTAACT------------G----------------------G----C----------------C-T----------------TCAACCGTTG
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        26225 26 +     37128 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCGTTG
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           5274 26 -      6963 GCTT-GTTGACT------------G----------------------G----C----------------C-T----------------TCAACCATTG
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           63779 39 -     68416 GTTT-GTTAGCT------------AACCTTGAGTTAATTACATTGAGA----T----------------C-T----------------T---------
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                           12899 39 +     13308 GTTT-GTTAACT------------GACCTTGAGTTAGTTACATTGAGA----T----------------C-T----------------T---------
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                            10070 26 -     18223 GTCT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCATTG
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              1808 26 +    188999 GTCT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCATTG
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           46107 26 +     57117 GTCT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCATTG
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          50787 26 +     54541 GTCT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCATTG
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15964973 26 +  43084221 attt-gttaact------------g----------------------A----T----------------C-T----------------TTGAATATAG
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         75588 26 +    196370 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCATTG
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          19769 26 +     40510 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCATTG
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15144410 26 -  15256731 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCGTTG
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      38874 26 -     53260 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCGTTG
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101149433 26 + 101219884 GTTT-GTTAAGT------------G----------------------A----C----------------C-T----------------TCAACCGTTG
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                19292 20 -     21363 -------TGACT------------C----------------------A----C----------------C-T----------------TGAACAACTT
i Choloepus_didactylus.ChoDid_scaffold_36182            I 3 C 0
s Choloepus_hoffmanni.KN194586.1                           764596 20 +    964067 -------TGACT------------C----------------------A----C----------------C-T----------------TGAACAACTT
i Choloepus_hoffmanni.KN194586.1                        I 3 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_954668              1522 22 -      1738 -----TTTGACA------------G----------------------A----C----------------C-T----------------TTAACCACTA
i Chrysochloris_asiatica.ChrAsi_scaffold_954668         I 4 C 0
s Condylura_cristata.JH655880.1                          60623595 26 +  78930452 GGTT-ATGGATG------------G----------------------A----C----------------C-T----------------TCAATCATTA
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         3988 25 -      5782 -TGT-GTGGATG------------A----------------------A----C----------------C-C----------------TCAACCACTG
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 283554 25 -    399297 atct-gctgaa-------------a----------------------A----A----------------C-T----------------TCAATTATTG
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53035855 26 +  72327488 atgt-gttaaGT------------C----------------------T----A----------------T-A----------------TAAATTAATG
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              3485 26 -     22648 GTTC-ATCAGTG------------A----------------------G----A----------------C-T----------------TCAATCATGG
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            58970 25 -     70449 G-TT-GTTGATG------------A----------------------A----T----------------C-T----------------TCAATTACTA
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  214856 25 -    956709 -TTT-TTTCACC------------A----------------------A----T----------------C-T----------------TTAGTTCTGA
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 36528 22 -     67205 ATTT-ATT----------------G----------------------A----T----------------A-T----------------TTGATTACAG
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                21466 26 +     26546 ATTT-GTTGACT------------A----------------------A----T----------------C-T----------------TTGATTATAG
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             62606 26 -    236241 ATTT-GTTGACT------------G----------------------A----T----------------C-T----------------TTGATTATAG
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          186320 26 -   6883506 GTTT-GTTGAAT------------G----------------------A----C----------------C-T----------------TCAACCATTG
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16849731 26 +  31942871 TTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAAACATTG
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80042076 26 -  96802777 GTTT-GTTGACT------------G----------------------A----C----------------C-T----------------TCAACCGTTG
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.PEHR01015603.1                            367 26 +       472 GTTC-ATTGACT------------G----------------------A----C----------------C-T----------------TCAACCATTG
i Desmodus_rotundus.PEHR01015603.1                      C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 327962 26 +    993696 gttt-gctgatc------------A----------------------A----C----------------C-T----------------TCAACCATTG
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   8596 26 +    151128 GTTT-GCTGATC------------A----------------------A----C----------------C-T----------------TCAACCATTG
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   160450 26 +    228994 ATGT-GTTGACT------------G----------------------A----T----------------C-T----------------TTGATTATAA
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3660900 26 +   4240102 GTTT-GTTGACT------------G----------------------A----C----------------T-T----------------GTAATTAATG
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  3274 26 -     11986 GTTT-GTTGACT------------G----------------------A----C----------------T-T----------------GTAATTAATG
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                41175 26 -     73477 ATTT-GTTGACT------------G----------------------G----T----------------A-T----------------TTGATTATAG
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           23000514 22 -  44670279 -----TTTAATT------------G----------------------A----C----------------C-T----------------TTAGTCATTG
i Echinops_telfairi.JH980316.1                          I 4 C 0
s Eidolon_helvum.AWHC01235761.1                              3560 26 -      8619 GTTT-GTTTACA------------G----------------------T----C----------------C-T----------------TCAACCATTG
i Eidolon_helvum.AWHC01235761.1                         C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1498012 26 +   1727528 GTTT-GTTGACT------------G----------------------A----T----------------C-T----------------TCAATCATTG
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7834767 22 +  15467074 -----TTTTTCC------------G----------------------A----C----------------c-t----------------ttaactgctg
i Elephantulus_edwardii.JH947210.1                      I 3 C 0
s Ellobius_lutescens.LOEQ01003611.1                        244598 26 -    369425 GTCT-GTTAAGT------------A----------------------A----A----------------T-T----------------TCCATTAATA
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01076532.1                            942 26 +      9159 GTCT-GTTAAGT------------A----------------------A----A----------------T-T----------------TCCATTAATG
i Ellobius_talpinus.LOJH01076532.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85878901 26 +  99434291 gttt-gttgTTG------------G----------------------A----C----------------C-T----------------TCAATTATTG
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4710448 26 +   6522550 GTTG-GCTGGCA------------G----------------------A----C----------------C-T----------------TCAACCATTG
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5857822 26 -   7175178 gttt-gTTGACA------------A----------------------A----C----------------C-T----------------TCAACCACTG
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13356308 26 +  41866177 gttt-GTTGACA------------A----------------------A----C----------------C-T----------------TCAACCACTG
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          17798 26 +     92910 gttt-gttgACA------------A----------------------A----C----------------C-T----------------TCAACCACTG
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11542977 26 +  16010500 ATTT-GTTGACA------------G----------------------G----C----------------C-T----------------TCAATCACTA
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48781443 26 -  48907691 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCGTTG
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          320323 26 +    330699 GTTT-GTTGACT------------G----------------------A----C----------------T-T----------------TCAACCATTG
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             66779 26 +     89355 GTTT-GTTGACT------------G----------------------A----C----------------T-T----------------TCAACCACTG
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              9875 17 +     13586 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------T---------
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_1015201                              3134 17 -      4292 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------T---------
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            16271 17 +     36558 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------T---------
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            12593 17 +     60246 GTTT-GTTAACT------------G----------------------A----C----------------T-T----------------T---------
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                16078 17 +    109717 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------T---------
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 4061 17 -     19505 GTTT-GTTAACT------------G----------------------A----C----------------T-T----------------G---------
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                20736 17 +     27497 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------T---------
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           23192 17 +     26808 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------T---------
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                37924 17 +     46535 GTTT-GTTAACT------------G----------------------A----C----------------T-T----------------T---------
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              20665 17 -     29447 GTTT-GTTAACT------------G----------------------A----C----------------T-T----------------T---------
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.AANG03202589.1                                  424 26 -       609 gttt-gctgATG------------A----------------------A----T----------------C-T----------------TCAATTATTG
i Felis_catus.AANG03202589.1                            C 0 C 0
s Felis_catus_fca126.CM031420.1                         129287353 26 - 158578461 gttt-gctgATG------------A----------------------A----T----------------C-T----------------TCAATTATTG
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 28456 26 +     52776 GTTT-GCTGATG------------A----------------------A----T----------------C-T----------------TCAATTATTG
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13896747 26 -  19261668 atttc-ctgaCT------------G----------------------A----T----------------C-T----------------TTGATTGTAG
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     215898 26 -    847004 GTTT-GCTGACT------------G----------------------A----C----------------C-T----------------TCAAACATTG
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           18259 26 -     43889 GTTT-GCTGACT------------G----------------------A----C----------------C-T----------------TCAAACATTG
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          15403 26 +     27357 GTTT-GCTAACT------------G----------------------A----C----------------C-T----------------TCAAACATTG
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               160175 26 +    324696 GTTT-GTTGACT------------A----------------------A----C----------------C-T----------------TCAACAATTG
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    187792 26 -    189561 GTTT-GTTGACA------------G----------------------A----T----------------C-T----------------ACAACCATTG
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           17071 26 -     18683 AGTT-TCTTACT------------G----------------------A----C----------------C-T----------------TCAATTTTTG
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               9859 26 -     14630 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCATTG
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119656959 26 - 195582420 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCATTG
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   80387 26 +    118900 AGTT-TGTTACC------------A----------------------A----C----------------C-T----------------TCAATTTTTG
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         6664 17 +     10286 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------T---------
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             5142 17 -     11661 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------T---------
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                            10469 17 +     56096 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------T---------
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        33718 17 -     42470 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------T---------
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        50341 17 -     54384 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------T---------
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              24086 26 +     53719 GTTT-GTTGATG------------A----------------------A----T----------------C-T----------------TCAATTACTG
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                34922 26 -     91191 GTTT-GTTGACC------------G----------------------A----T----------------C-T----------------TCAACCATTG
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2561244 26 +  31725842 ATTTG-TTGACT------------G----------------------A----T----------------C-T----------------TTGATTATAG
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               63472 26 +     73687 CTTT-TTTGACT------------G----------------------A----C----------------T-T----------------TAAACCACTG
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              152130 26 +    277961 GTTT-GTTGACT------------G----------------------A----C----------------C-T----------------TCAACCATTA
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959               2863 11 +     26078 -----------------------------------------------------------------------T----------------TCAATCACTG
i Hipposideros_galeritus.HipGal_scaffold_52959          I 13 C 0
s Hipposideros_armiger.JXIK01001085.1                      285164 13 -    477199 -ttt-gttgATG------------G----------------------A----C---------------------------------------------
i Hipposideros_armiger.JXIK01001085.1                   C 0 I 11
s Hoolock_leuconedys.ctg79                                      9770 26 -   7690867 GTTT-GTTAATT------------G----------------------A----C----------------C-T----------------TCAACCACTG
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 24526 26 -     67322 ATTT-GTTGATG------------A----------------------A----T----------------C-T----------------TCAATTATTG
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           21842 26 -    119109 ATTT-GTTGACT------------G----------------------A----T----------------A-T----------------TTGATTATAG
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_1816750                             2341 26 +      3202 GTTT-GTTAATT------------G----------------------A----C----------------C-T----------------TCAACCACTG
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1136966                               350 26 +      9785 GTTT-GTTAATT------------G----------------------G----C----------------C-T----------------TCAACCACTG
i Hylobates_agilis.k141_1136966                         C 0 C 0
s Hylobates_klossii.k141_468230                              3830 26 +      5464 GTTT-GTTAATT------------G----------------------A----C----------------C-T----------------TCAACCACTG
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14629176 26 -  25970782 GTTT-GTTAATT------------G----------------------A----C----------------C-T----------------TCAACCACTG
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            1728 26 +      4161 GTTT-GTTAATT------------G----------------------A----C----------------C-T----------------TCAACCACTG
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                    10137 25 +     22540 AT-T-TTTGATT------------G----------------------A----T----------------C-T----------------TTGATTATAG
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7130974 26 +  13083262 agtt-tgaTGTG------------A----------------------A----A----------------C-T----------------TCAATTATTG
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   2187 17 +      3484 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------T---------
i Indri_indri.k141_2197838                              C 0 I 16
s Inia_geoffrensis.IniGeo_flattened_line_66725              14303 26 +     17520 GTTT-GTTTACT------------G----------------------A----C----------------C-T----------------TCAACCATTG
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8579775 13 +  11848649 ----------------------------------------------------C----------------C-T----------------TCCATTGCTG
i Jaculus_jaculus.JH725517.1                            I 5 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               28938 26 +     37189 GTTT-GTTGACT------------G----------------------A----C----------------C-T----------------TCAACAATTG
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          54629 25 -    147782 CTTT-GTTAACT------------G----------------------A----T----------------C-T----------------TCAACC-TTG
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    7015 26 +     26176 GTTG-ACTAGCA------------G----------------------T----C----------------C-T----------------TCAACCATTG
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258412019 17 - 285822530 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------T---------
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        29325 33 +     39228 GTTT-GTTAACT------------GACCTTCA---AA---CATTGAGA----C----------------C-T----------------T---------
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            58689 33 +     63517 GTTT-GTTAACT------------GACCTTCA---AA---CATTGAGA----C----------------C-T----------------T---------
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        37069 33 -     38897 GTTT-GTTAACT------------GACCTTCA---AA---CATTGAGA----T----------------C-T----------------T---------
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      3115 33 -     13103 GTTT-GTTAACT------------GACCTTCA---AA---CATTGAGA----C----------------C-T----------------T---------
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3092847 26 -   3498232 gttt-gttgatG------------G----------------------A----C----------------C-T----------------TCAATTATTG
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    21623  5 +     22452 ---------------------------------------------------------------------------------------------CACTG
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            141243 26 +   3060487 GTTT-GTTGACT------------G----------------------A----C----------------C-T----------------TCAACCATTG
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19253064 26 +  19376315 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCGTTG
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           15861 26 +     84689 GTTT-GCTAATG------------G----------------------A----C----------------C-T----------------TCAAACATTG
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3783599 26 +   6799190 GTTT-GCTAACG------------G----------------------A----C----------------C-T----------------TCAAACATTG
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20599397 26 -  62548349 GTTT-TTTGACT------------G----------------------A----C----------------C-T----------------TTAACCATTG
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11096614 26 +  39895028 gttt-gttgatG------------G----------------------A----C----------------C-T----------------TCAATTATTG
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             24815 26 +     74745 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCGTTG
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12711276 26 +  12821369 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCGTTG
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                3849 26 -     26467 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCGTTG
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           51720 26 +     63263 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCGTTG
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 3830 26 -     26361 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCGTTG
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 7020 26 -      7381 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCGTTG
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  50249 26 -     79256 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCGTTG
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196040347 26 + 196197964 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCGTTG
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11450517 26 +  11645122 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCGTTG
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   9203 26 -     46448 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCGTTG
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                6866 26 -     13212 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCGTTG
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 20546 26 -     55006 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCGTTG
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43845661 26 +  43892939 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCGTTG
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               21830 26 -     24607 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCGTTG
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               9200 26 -     27140 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCGTTG
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                703325 26 +    802869 GTTT-GTTTATG------------G----------------------A----C----------------C-T----------------TCAACCACTG
i Macroglossus_sobrinus.MacSob_scaffold_879             I 7 I 5
s Mandrillus_leucophaeus.scaffold125                     43442236 26 -  43563597 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCGTTG
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4455040 26 -   4543643 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCGTTG
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            153605 26 +    252755 gttt-GTTGACT------------G----------------------A----C----------------C-T----------------TCAATCTTTG
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             41215 14 +     58827 -----------------------------------------------A----C----------------C-T----------------TCAATCTTTG
i Manis_pentadactyla.KN017078.1                         I 8 C 0
s Marmota_marmota.CZRN01000005.1                         36878841 26 +  64221397 agtt-tgaTGCG------------A----------------------A----A----------------C-T----------------TCAATTATTG
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       67103 25 -    234502 -TTT-CTTGATC------------G----------------------A----C----------------C-T----------------TCAACCACTG
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             7995 26 -     87323 GTTT-GTTGTTG------------G----------------------A----C----------------C-T----------------TCAATTATTG
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 2831 26 +    115071 TTCT-GCTGACT------------A----------------------A----A----------------C-T----------------TCAATTATTG
i Meriones_unguiculatus.MerUng_scaffold_9483            I 1 C 0
s Mesocricetus_auratus.KB708139.1                         1052418 26 -  26018355 GTGT-GTTGAGT------------C----------------------T----A----------------T-T----------------TAAATTAGTG
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    3894 26 -     12939 GTTT-GTTGACT------------G----------------------A----C----------------C-T----------------TCAACCATTG
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16515050 33 +  47401472 GTTT-GTTAGCT------------GTCCTTCA---AA---CATTGAGA----T----------------C-T----------------T---------
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  42082 22 -     48017 -----TTTGATT------------G----------------------A----C----------------C-T----------------TTAATCATTG
i Microgale_talazaci.MicTal_scaffold_34660              I 4 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               26421 26 -     32043 GGTT-GTTGACA------------G----------------------A----C----------------C-T----------------TCAACCATCG
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22825423 26 -  98408828 GTCT-GTTAAGT------------A----------------------A----A----------------T-T----------------TCCATTAATG
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8214591 26 +  10048721 GTTT-GTTGACA------------G----------------------A----T----------------C-A----------------TCAACCATTG
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            39049 26 +     45743 GTTT-GTTGACA------------G----------------------A----T----------------C-A----------------TCAACCATtg
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         6782 26 +     29742 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCGTTG
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        18343 26 -    104932 GTTT-GTTGATG------------G----------------------A----C----------------C-T----------------TCAATTATTG
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     5733 33 -     12809 GTTT-GTTAACT------------GTCCTTCA---AA---CATTGAGA----T----------------C-T----------------T---------
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 151669 26 +    154973 GTTT-GTTGACT------------G----------------------A----C----------------C-T----------------TCAACCGTTG
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                164937 26 +    265003 GTTT-GTTGAGA------------G----------------------A----C----------------C-T----------------TCAACCACTG
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  8471 26 -     19904 GTTT-GTTGACT------------G----------------------A----T----------------C-T----------------TCAACTACTG
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  151825 26 -    168139 GTTT-GTTGATG------------A----------------------A----T----------------C-T----------------TCAATTACTG
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          25757 26 -    100666 GTTT-GTTGGCA------------G----------------------A----C----------------C-T----------------TCAACCATTG
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70772662 26 +  92629107 GTCT-GCTGAAT------------G----------------------A----A----------------T-T----------------TCAACTATTG
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75494714 26 +  98207768 GTCT-GCTGAGT------------G----------------------A----A----------------C-T----------------TCAACTATTG
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67561466 26 +  89017189 GTCT-GCTGAAT------------G----------------------A----A----------------C-T----------------TCAACTATTG
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74337437 26 +  97876770 ATCT-GCTGAGT------------G----------------------A----A----------------C-T----------------TCAACTATTG
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             15479 26 +     98495 AGCT-TATTACT------------A----------------------A----T----------------C-T----------------TTGATTTTTG
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4430102 26 -  28371801 gttt-attgttG------------G----------------------A----C----------------C-T----------------TCAATTTTTG
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     96245 26 -    117718 ATTT-ATTAGCT------------G----------------------A----T----------------G-T----------------TTGATTACAG
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               972771 26 +   8389877 GTTT-GTTGGCA------------G----------------------A----C----------------C-T----------------TCAACCATTG
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5023847 26 +   6462685 GTTT-GTTGGCA------------G----------------------A----C----------------C-T----------------TCAACCATTG
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3470276 26 -   3747815 GTTT-GTTGGCA------------G----------------------A----C----------------C-T----------------TCAACCATTG
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        15509 26 +     66751 GTTT-GTTGGCA------------G----------------------A----C----------------C-T----------------TCAACCATTG
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             8266 20 -      8794 -------TGACT------------C----------------------A----C----------------C-T----------------AGAACCACTG
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        I 3 C 0
s Nannospalax_galili.KL201303.1                            125161 26 +    362372 gtct-atTGACT------------A----------------------A----C----------------G-T----------------TCAATTATTG
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4491738 26 -  14209539 gttt-gttgatG------------G----------------------A----C----------------C-T----------------TCAATTATTG
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3956260 26 -   4490290 GTTT-GTTGACT------------G----------------------A----C----------------C-T----------------TCAACCGTTG
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  52251 26 +     94413 GTTT-GTTGACA------------G----------------------A----C----------------C-T----------------TCAACCATTG
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_762468                             847 26 -      2755 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAGCCACTG
i Nomascus_annamensis.k141_762468                       C 0 C 0
s Nomascus_concolor.k141_256540                              7459 26 -      8966 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAGCCACTG
i Nomascus_concolor.k141_256540                         C 0 C 0
s Nomascus_gabriellae.k141_1400361                           1398 26 -      2203 GTTT-GTTAATT------------G----------------------A----C----------------C-T----------------TCAACCACTG
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_453                             6710 26 +     12787 GTTT-GTTAATT------------G----------------------A----C----------------C-T----------------TCAACCACTG
i Nomascus_siki_b.tarseq_453                        C 0 C 0
s Nomascus_siki_a.k141_421408                                  1312 26 +     16235 GTTT-GTTAATT------------G----------------------A----C----------------C-T----------------TCAACCACTG
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                39483 26 +   3668941 gttt-gttgatG------------G----------------------A----C----------------C-T----------------TCAATTATTG
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65572524 27 -  95554990 GTTT-GCTAATG------------G----------------------A----C----------------CTT----------------TCAaacattg
i Nycticebus_bengalensis.LG16                           C 0 I 108
s Nycticebus_coucang.k141_771591                            15934 27 +     16181 GTTT-GCTAATG------------G----------------------A----C----------------CTt----------------tcaaacattg
i Nycticebus_coucang.k141_771591                        I 1 n 135
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65680712 27 +  89412551 gttt-gctaatg------------g----------------------a----c----------------ctt----------------tcaaacattg
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 I 105
s Ochotona_princeps.JH802095.1                            5000695 27 -  23139505 AGTT-TGTTGAA------------A-----G----------------A----T----------------C-T----------------GTGACCACTG
i Ochotona_princeps.JH802095.1                          I 2 C 0
s Octodon_degus.JH651621.1                                3691582 26 +  10294119 attt-attgact------------g----------------------a----T----------------G-T----------------TTGATTACAG
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             686436 26 -   3126709 gttt-attgatg------------G----------------------A----C----------------C-T----------------TCAATTATTA
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1085450 26 +   1425656 GTTT-GTTGACT------------G----------------------A----T----------------C-T----------------TCAACCATTG
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         43515 26 +     78940 GTTT-GTTGACT------------G----------------------A----T----------------C-T----------------ACAACCATTG
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  131226 25 +    145789 gtct-gt-aagt------------A----------------------A----A----------------T-T----------------TCCATAAATG
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  44141 26 +     62360 ATCT-GTTGAGT------------A----------------------A----A----------------T-T----------------TCAATTAATG
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7229941 26 -   7562323 GTTT-GTTGACT------------G----------------------A----C----------------C-T----------------TCAACCGTTG
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              64798 22 -     66828 -----TTTGATT------------G----------------------A----T----------------C-T----------------TTAACCATTG
i Orycteropus_afer.OryAfe_flattened_line_13509          I 3 C 0
s Oryctolagus_cuniculus.CM000803.1                      141884639  5 + 163896628 ---------------------------------------------------------------------------------------------CACTG
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      316621 26 -    505867 gttt-gttgatG------------G----------------------A----C----------------C-T----------------TCAATTATTG
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        5760 26 -     53940 GTTT-GCTGACT------------G----------------------A----C----------------C-T----------------TCAAACATTG
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18013729 26 -  38779656 GTTT-GCTGACT------------G----------------------A----C----------------C-T----------------TCAAACATTG
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134084707 26 - 275406953 GTTT-GTTGACC------------G----------------------A----T----------------C-T----------------TCAACCATTG
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      85945 26 +    140051 GTTT-GTTGACT------------G----------------------A----T----------------C-T----------------TCAACCATTG
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127579138 26 - 205426864 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCATTG
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120156298 26 - 196562556 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCATTG
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  41378 26 +    295523 GTTT-GCTGATG------------A----------------------A----T----------------C-T----------------TCAATTATTG
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3645194 26 +  18214204 gttt-gctgATG------------A----------------------A----T----------------C-T----------------TCAATTATTG
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5034835 26 -   6340057 gttt-gctGATG------------A----------------------A----T----------------C-T----------------TCAATTATTG
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1073577 26 -   1292953 GTTT-GTTGACT------------G----------------------A----T----------------C-T----------------TCAACCACTG
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188161025 26 - 188283584 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCGTTG
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              4115 26 +     25005 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCGTTG
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47518397 26 +  47705337 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCGTTG
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 72388 26 -    104429 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCGTTG
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   10920 26 +     14967 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCGTTG
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 6785 26 -      7628 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCGTTG
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    122848 26 -    135482 GTTT-CTTGATG------------A----------------------A----T----------------C-T----------------TCAATTATCG
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          11424 26 -     23713 GTTT-GCTAACT------------G----------------------A----C----------------C-T----------------TCAAACATTG
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           12575 26 +     61070 GTTT-GCTAACT------------G----------------------A----C----------------C-T----------------TCAAACATTG
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       2895 26 +     49596 GTTT-GTTGACT------------G----------------------A----C----------------C-T----------------GTAATTGTTG
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615458.1                       2840008 26 -   3366660 GTCT-GTTGAGT------------A----------------------A----A----------------T-T----------------TCAATTAATG
i Peromyscus_maniculatus.KI615458.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    17587 24 -     36578 ATTT--TTGACT------------G----------------------A----T----------------A-T----------------TTGA-TATAT
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              4401 26 +      8220 GTTT-GTTGACT------------G----------------------A----C----------------C-T----------------TCAACCGTTG
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306           101025 30 +    112873 GTTG-GTTGGCA------------A----------------------TAGTCT----------------C-T----------------TCAACCATTG
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990          10883 26 +     21690 GTTT-GTTGACT------------G----------------------A----C----------------C-T----------------TCAACCATTG
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       26719 26 +     44506 GTCT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCATTG
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        26932 26 +     67491 GTCT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCATTG
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      17171 26 -     98129 GTCT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCATTG
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     26772 26 +    147771 GTCT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCATTG
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         3407 26 -     43940 GTCT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCATTG
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          7490 26 -     55515 GTCT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCATTG
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         26844 26 +    152463 GTCT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCATTG
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       4652 26 -    119457 GTCT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCATTG
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         16566 26 +    134592 GTCT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCATTG
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          27154 26 -     75465 GTCT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCATTG
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              191769 26 -    373494 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCATTG
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19812416 26 +  19899266 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCATTG
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                4578 26 -      9567 CTTT-TTTGACT------------G----------------------A----C----------------T-T----------------TAAACCACTG
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6853390 17 +  12164890 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------T---------
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     22199 17 -     30946 NNNN-NNNNNNN------------N----------------------N----N----------------N-N----------------N---------
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         8477 33 +     11805 GTTT-GTTAACT------------G----------------------A----C----------------C-TTCAAACATTGAGATCTT---------
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           47811 17 +     52369 GTTT-GTTAAGT------------G----------------------A----C----------------C-T----------------T---------
i Propithecus_diadema.k141_577245                       C 0 I 16
s Propithecus_edwardsi.k141_1317105                         40198 17 -     44753 GTTT-GTTAAGT------------G----------------------A----C----------------C-T----------------T---------
i Propithecus_edwardsi.k141_1317105                     C 0 I 16
s Propithecus_perrieri.k141_7554                            22121 17 +     27322 GTTT-GTTAAGT------------G----------------------A----C----------------C-T----------------T---------
i Propithecus_perrieri.k141_7554                        C 0 I 16
s Propithecus_tattersalli.k141_907138                       21770 29 -     53241 GTTA-ACTGACCTTCAAACATTGAG----------------------A----T----------------C-T----------------T---------
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         44033 29 -     48185 GTTA-ACTGACCTTCAAACATTGAG----------------------A----T----------------C-T----------------T---------
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           39808 26 +     77221 ttct-GCTGACT------------A----------------------A----A----------------C-T----------------TCAATTATTG
i Psammomys_obesus.NESX01026517.1                       I 1 C 0
s Pteronotus_parnellii.KE867983.1                            7589 26 -     27784 GTTT-GTTGACA------------G----------------------A----C----------------T-T----------------TCAATTATTG
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        251745 26 -    344369 GTTT-GTTGTTG------------G----------------------A----C----------------C-T----------------TCAATTATTG
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13248397 26 -  17261082 gttt-gtttaTG------------G----------------------A----C----------------C-T----------------TCAACCATTG
i Pteropus_alecto.KB031157.1                            I 7 C 0
s Pteropus_vampyrus.KN525959.1                             606347 26 -   3946241 gttt-gtttaTG------------G----------------------A----C----------------C-T----------------TCAACCATTG
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131541313 26 - 161321710 gttt-gctgATG------------A----------------------A----T----------------C-T----------------TCAATTACTG
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                22294 26 +     68503 GTTT-GTTGACT------------G----------------------A----T----------------C-T----------------TCAACCATTG
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13918413 25 +  90463843 -TCT-GCTGAAT------------G----------------------A----A----------------C-T----------------TCAACTATTG
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1794218 25 +   2252614 -ttt-gtTGATG------------G----------------------A----C----------------C-T----------------TCAATCACTG
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                21743 26 +    109198 GTTT-GTTTATG------------G----------------------G----C----------------C-T----------------TCAACCATTG
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                      2974 26 -      4338 GTTT-GTTGACT------------G----------------------A----T----------------C-T----------------TCAACCATTA
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15677176 26 -  43202129 gttt-attaACT------------G----------------------A----C----------------C-T----------------TCAACCATTG
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        9089 26 +     34089 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCATTG
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              9029 26 -     60842 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCATTG
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              9123 26 +     67014 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCATTG
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              9100 26 +     60816 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCATTG
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 9037 26 -     76454 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCATTG
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17345822 26 -  30362882 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCATTG
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         25143 26 -     62485 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACCATTG
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   41029 26 -    114521 GGTT-ATTGATG------------G----------------------A----C----------------C-T----------------TCAATCATTA
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  106309 26 -    120886 gtct-gttgaat------------a----------------------a----a----------------T-T----------------CCAATTAGTA
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            25682 26 +    739146 GTTT-GTCAATG------------G----------------------A----C----------------C-T----------------TAAATCCTTA
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17775821 26 -  27805282 GTTT-GCCCTTG------------G----------------------G----T----------------C-T----------------TCAACCACTG
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2244675 26 +   2842873 agtt-tgaTGCG------------A----------------------A----A----------------C-T----------------TAAATTATTG
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             240520 26 -    276980 ATTT-GTTGATG------------G----------------------A----C----------------C-T----------------TCAATTATTG
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            34715 26 +     62062 GTTT-GTTGATG------------A----------------------A----T----------------C-T----------------TCAATTACTG
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189276720 26 + 218635234 GTTT-GTTGACT------------G----------------------A----C----------------T-T----------------TCAACCATTG
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        19435 26 -  13920577 GTTT-GTTAATT------------G----------------------A----C----------------C-T----------------TCAACCACTG
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                3842 26 +     20549 GTTT-GTTGACA------------G----------------------A----C----------------C-T----------------TCAACCACTG
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               17940 20 +     45698 -------TGACT------------C----------------------A----C----------------C-T----------------AGAACCACTG
i Tamandua_tetradactyla.TamTet_scaffold_26877           I 3 C 0
s Tapirus_indicus.TapInd_scaffold_176                      812297 26 +   1148477 GTTT-GTTGACA------------A----------------------A----A----------------C-T----------------TCAACCACTG
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  62940 26 +     99546 GTTT-GTTGACA------------A----------------------A----A----------------C-T----------------TCAACCACTG
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194012558 26 - 194193292 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAACTGTTG
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                  1120 26 -      3104 GCTT-GTTGACT------------G----------------------A----C----------------C-T----------------TCAACCATTG
i Tolypeutes_matacus.TolMat_scaffold_475685             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  139596 26 -    259118 GTTT-GTTGACA------------G----------------------A----C----------------C-T----------------TCAACCACTG
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                  10282 26 +     90398 GTTT-GTTGACT------------C----------------------A----C----------------C-T----------------TTAATCACTG
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16090468 26 +  31416278 TTTT-TTTGACT------------G----------------------A----C----------------C-T----------------TTAACCATTG
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2801737 26 -   3938065 GTTT-GTTGACT------------G----------------------A----C----------------C-T----------------TCAGTAATTA
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                   10560 26 +     13056 GTTT-GTTGACT------------G----------------------A----C----------------C-T----------------TCAGTAATTA
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69318671 26 -  96451834 GTTT-GTTGACT------------G----------------------A----C----------------C-T----------------TCAACCGTTG
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                    1417 26 +    136657 GTTT-GTTGGTG------------G----------------------A----C----------------C-T----------------TCAATCATTA
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 C 0
s Ursus_maritimus.KK498671.1                              6522169 26 +  28682327 GTTT-GTTGATG------------G----------------------A----C----------------C-T----------------TCAATTCTTG
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                 10036 25 -     20643 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAAA-ATGG
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             29571 25 -     33872 GTTT-GTTAACT------------G----------------------A----C----------------C-T----------------TCAAA-ATGG
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1529701 26 -   2331223 gttt-gtTGATT------------G----------------------A----C----------------C-T----------------TCAATCGTTG
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                145848 26 -    281493 GTTT-GTTGATG------------G----------------------A----C----------------C-T----------------TCAGTTATTG
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       132170 26 -    134049 AGTT-TGATACT------------G----------------------A----A----------------C-T----------------TCAATTATTG
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        221294 26 -    227762 GTTT-GTTGATG------------G----------------------A----C----------------C-T----------------TCAATTATTG
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_202118                     1857 13 -      3360 ----------------------------------------------------C----------------C-T----------------TCCATTACTG
i Zapus_hudsonius.ZapHud_scaffold_202118                I 5 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            3256 26 -     13665 GTTT-GTTGACT------------G----------------------A----C----------------C-T----------------TCAACCATTG
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Hylobates_pileatus_a.tarseq_592                             37267 2881 -     60944 I
e Trachypithecus_pileatus.k141_532233                       30126  0 -     40754 I
e Trachypithecus_phayrei.ctg364                            232455  0 -   1198723 I
e Trachypithecus_obscurus.k141_411399                         131  0 +     12010 I
e Trachypithecus_melamera.k141_950981                        2232  0 -      3512 I
e Trachypithecus_leucocephalus.k141_352489                   1214  0 +      9423 I
e Trachypithecus_laotum.k141_897381                         45646  0 -     53586 I
e Trachypithecus_hatinhensis.k141_641377                     1240  0 +      1365 I
e Trachypithecus_germaini.k141_240878                        5067  3 -     24955 I
e Trachypithecus_geei.k141_137495                           30106  0 -     42322 I
e Trachypithecus_francoisi.k141_1012484                       874  0 +      8809 I
e Trachypithecus_cristatus.k141_968903                      32589  3 +     43409 I
e Trachypithecus_crepusculus.k141_863597                     4944  0 -     23436 I
e Trachypithecus_auratus.k141_672638                         4947  3 +     38635 I
e Tarsius_wallacei.k141_48636                               64696  0 +     65473 C
e Tarsius_lariang.k141_609102                               31387  0 +     42269 C
e Semnopithecus_vetulus.k141_748269                          4706  0 +     17284 I
e Semnopithecus_schistaceus.k141_628310                     45652  0 -     53123 I
e Semnopithecus_priam.k141_368201                           10107  0 -     20692 I
e Semnopithecus_johnii.k141_1300894                          1368  0 +     13764 I
e Semnopithecus_hypoleucos.k141_2141024                      1351  0 -      8815 I
e Semnopithecus_entellus.k141_1743075                       45578  0 +     45790 I
e Rhinopithecus_strykeri.ctg241                            462135  0 +   1472273 I
e Rhinopithecus_bieti.k119_554384                            2917  0 -     17045 C
e Pygathrix_nigripes_a.k141_758202                             3050  0 -      8240 I
e Pygathrix_nigripes_b.ctg25                                14340869  0 -  15297009 I
e Pygathrix_cinerea.k141_951151                              3033  0 -      8225 I
e Presbytis_mitrata.k141_1767317                            10996  0 +     15869 I
e Presbytis_comata.k141_678168                              11007  0 +     11126 I
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000342.1                3428480  0 -   4356645 I
e Piliocolobus_kirkii.k141_451083                            4879  0 -     13367 I
e Piliocolobus_gordonorum.k141_736355                       29715  0 +     67079 I
e Piliocolobus_badius.k141_512007                           29798  0 +     37672 I
e Nasalis_larvatus.k141_1382660                              4275  0 +      5784 I
e Colobus_polykomos.k141_1178012                               88  3 -     11758 I
e Colobus_guereza.LG08                                   96946830  0 - 156195979 I
e Colobus_angolensis.KN983490.1                            283936  0 +    886210 I
e Cephalopachus_bancanus.k141_702587                        12545  0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530  0 +    345090 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               18188  7 +    209709 A-----------GACC-TT
s Acinonyx_jubatus.LLWD01000356.1                         2040984  7 +   3721120 A-----------GACC-AT
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    118676  7 -    189883 A-----------TACC-TT
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10664927  7 +  23371972 A-----------GAGC-TT
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7101880  7 -  16596857 A-----------GAGC-TT
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_141108                   2041  7 -      7259 A-----------CAGC-AT
i Allactaga_bullata.AllBul_scaffold_141108              C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   6061  7 -     60446 A-----------GACC-TT
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         6777  7 -     29318 A-----------GACC-TT
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         5715  7 +     38766 A-----------GACC-TT
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          6671  7 -     80423 A-----------GACC-TT
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              1650  7 +     19852 A-----------GACT-TT
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                3894  7 -     12443 A-----------GACT-TT
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                             1193  7 +      5070 A-----------GACT-TT
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                  938  7 -      1641 A-----------GACT-TT
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          3677  7 -     24210 A-----------GACT-TT
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_494922                              181  7 -      8325 A-----------GACT-TT
i Alouatta_nigerrima.k141_494922                        C 0 C 0
s Alouatta_palliata.k141_405616                              6095  7 +     16794 A-----------GACT-TT
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                            1227  7 -      1470 A-----------GACT-TT
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             5372  7 -      9835 A-----------GACT-TT
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3528124  3 +   4113121 A-----------GA-----
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      394211  4 -    631301 A-----------GAC----
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             5285  3 +     55446 A-----------GA-----
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 66980  7 +     78111 A-----------GACC-TT
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            9924  7 +     22701 A-----------GACC-TT
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5753891  7 +   9889416 A-----------GACC-TT
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                            10490  7 -    104377 A-----------GACC-TT
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                              10497  7 +     23246 A-----------GACC-TT
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     3156  7 +     11424 A-----------GATC-AT
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        7072  7 +      9265 A-----------GACC-TT
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                12499  7 -     29036 A-----------GACT-TT
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9543782  7 +  39197703 A-----------GACC-TT
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             65056  7 +     85812 A-----------GACC-TT
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                16069  7 +     89302 A-----------GACC-TT
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             20570  7 -     58268 A-----------GACC-TT
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             68564  7 +    119057 A-----------GACC-TT
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              10533  7 -     25888 A-----------GACC-TT
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26385505  7 +  51448160 A-----------GACC-TT
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                       10678  7 -     13118 A-----------GACC-TT
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   50093  3 -     72089 A-----------GA-----
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   305043  3 -   6870073 A-----------GA-----
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22959149  3 + 161108492 A-----------GA-----
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     421328  3 +    998990 A-----------GA-----
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22667801  3 + 158972876 A-----------GA-----
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               676639  3 +   1914593 A-----------GA-----
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               118433  7 -    171031 A-----------GACC-TT
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 17453  7 +    125063 A-----------GACC-TT
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                19500  7 -    216513 A-----------GACC-TT
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       12043  7 -    134917 A-----------GACC-TT
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3224619  7 -   8989139 A-----------GACC-TT
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           402319  7 -  15254737 A-----------GACC-TT
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2978057  7 +   6889770 A-----------GACC-TT
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11527790  3 +  39901454 A-----------GA-----
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   22764  3 +     87036 A-----------GA-----
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11274687  3 -  35597290 A-----------GA-----
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11097184  3 +  39895921 A-----------GA-----
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16463969  3 -  44759192 A-----------GA-----
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21335557  3 + 157394656 A-----------GA-----
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135713910  3 - 157403528 A-----------GA-----
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_780116                   168  7 +      1571 A-----------AACC-CT
i Capromys_pilorides.CapPil_scaffold_780116             C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               63493  7 +     67245 A-----------GACC-TT
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_1326                      609  4 -    202837 A--------------T-CA
i Castor_canadensis.CasCan_scaffold_1326                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   164354  7 -    276539 A-----------GACC-TT
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15790304  7 -  24422027 A-----------GACT-TT
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15802243  7 -  24440124 A-----------GACT-TT
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       180415  7 +    436027 A-----------GACT-TT
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18896160  7 -  29618158 A-----------GACC-TT
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                12810  7 -     26817 A-----------GATC-TT
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                17054  7 +     25043 A-----------GACC-TT
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4369589  7 +   7569818 A-----------GACT-TT
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Cercocebus_atys.KQ010443.1                              6560001  7 +   6739814 A-----------GACC-TT
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      31478  7 +     60454 A-----------GACC-TT
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          6682  7 -     21101 A-----------GACC-TT
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         63992  7 -    107033 A-----------GACC-TT
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        6855  7 -     17608 A-----------GACC-TT
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          4020  7 +     45019 A-----------GACC-GT
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           4296  7 +     15177 A-----------GACC-TT
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          6902  7 +     16677 A-----------GACC-TT
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           29092  7 +     35983 A-----------GACC-TT
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11995623  7 +  12117833 A-----------GACC-TT
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46482599  7 +  46592721 A-----------GACC-TT
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                        716  7 -     27215 A-----------GACC-TT
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       6916  7 +     35577 A-----------GACC-TT
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        6710  7 -     25661 A-----------GACC-TT
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        6882  7 -     17744 A-----------GACC-TT
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        26251  7 +     37128 A-----------GACC-TT
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           5300  7 -      6963 A-----------GACC-TC
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheracebus_lucifer.k141_619653                            10096  7 -     18223 A-----------GACC-TT
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              1834  7 +    188999 A-----------GACC-TT
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           46133  7 +     57117 A-----------GACC-TT
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          50813  7 +     54541 A-----------GACC-TT
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15964999  7 +  43084221 A-----------AGCC-CT
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         75614  7 +    196370 A-----------GACC-TT
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          19795  7 +     40510 A-----------GACC-TT
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15144436  7 -  15256731 A-----------GACC-TT
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      38900  7 -     53260 A-----------GACC-TT
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101149459  7 + 101219884 A-----------GACC-TT
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                19312  7 -     21363 A-----------GACC-TC
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           764616  7 +    964067 A-----------GACC-TC
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_954668              1544  7 -      1738 A-----------GACT-TT
i Chrysochloris_asiatica.ChrAsi_scaffold_954668         C 0 C 0
s Condylura_cristata.JH655880.1                          60623621  7 +  78930452 A-----------GATG-TT
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         4013  3 -      5782 A-----------AA-----
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 283579  7 -    399297 G-----------AGCC-TT
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53035881  7 +  72327488 G-----------GACC-TT
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              3511  7 -     22648 A-----------GACT-TT
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            58995  7 -     70449 A-----------GGCC-AT
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  214881  7 -    956709 A-----------GACT-CC
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 36550  7 -     67205 T-----------AGCC-CT
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                21492  7 +     26546 A-----------GATT-CT
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             62632  7 -    236241 A-----------GACC-CT
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          186346  7 -   6883506 A-----------GTCC-TT
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16849757  7 +  31942871 A-----------GACC-TG
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80042102  7 -  96802777 A-----------GACC-TT
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.PEHR01015603.1                            393  7 +       472 A-----------GACC-TT
i Desmodus_rotundus.PEHR01015603.1                      C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 327988  7 +    993696 A-----------GACT-TT
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   8622  7 +    151128 A-----------GACT-TT
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   160476  7 +    228994 A-----------AATC-CT
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3660926  7 +   4240102 A-----------AGCT-GT
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  3300  7 -     11986 A-----------AGCT-GC
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                41201  7 -     73477 A-----------ACCC-CT
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           23000536  7 -  44670279 A-----------GGGT-TT
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.AWHC01235761.1                              3586  3 -      8619 A-----------GA-----
i Eidolon_helvum.AWHC01235761.1                         C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1498038  3 +   1727528 A-----------GA-----
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7834789  7 +  15467074 a-----------tatt-tt
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        244624  7 -    369425 G-----------GACC-TT
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01076532.1                            968  7 +      9159 G-----------AACC-TT
i Ellobius_talpinus.LOJH01076532.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85878927  7 +  99434291 A-----------AAGC-TT
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4710474  7 +   6522550 A-----------GACC-TT
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5857848  7 -   7175178 A-----------GACT-TT
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13356334  7 +  41866177 A-----------GACT-TT
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          17824  7 +     92910 A-----------GACT-TT
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11543003  7 +  16010500 A-----------GATA-CT
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48781469  7 -  48907691 A-----------GACC-TT
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          320349  7 +    330699 A-----------GACC-TT
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             66805  7 +     89355 A-----------GACC-TT
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Felis_catus.AANG03202589.1                                  450  7 -       609 A-----------GACC-AT
i Felis_catus.AANG03202589.1                            C 0 C 0
s Felis_catus_fca126.CM031420.1                         129287379  7 - 158578461 A-----------GACC-AT
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 28482  7 +     52776 A-----------GACC-AT
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13896773  7 -  19261668 A-----------GTCA-CT
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     215924  7 -    847004 A-----------TACT-TT
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           18285  7 -     43889 A-----------GACT-TT
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          15429  7 +     27357 A-----------GACT-TC
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               160201  7 +    324696 A-----------CACC-TC
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    187818  3 -    189561 A-----------GA-----
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           17097  8 -     18683 A-----------GCATGAT
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               9885  7 -     14630 A-----------GACC-TT
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119656985  7 - 195582420 A-----------GACC-TT
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   80413  7 +    118900 A-----------GCCC-TT
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              24112  7 +     53719 A-----------GACC-AT
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                34948  3 -     91191 A-----------GA-----
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2561270  7 +  31725842 A-----------GACC-CT
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               63498  7 +     73687 A-----------GACT-TT
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              152156  7 +    277961 A-----------GACC-TT
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      285188  3 -    477199 A-----------AA-----
i Hipposideros_armiger.JXIK01001085.1                   I 11 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959               2874  3 +     26078 A-----------AA-----
i Hipposideros_galeritus.HipGal_scaffold_52959          C 0 C 0
s Hoolock_leuconedys.ctg79                                      9796  7 -   7690867 A-----------GACC-TT
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 24552  7 -     67322 A-----------GACC-AT
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           21868  7 -    119109 A-----------GACC-CT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_1816750                             2367  7 +      3202 A-----------GACC-TT
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1136966                               376  7 +      9785 A-----------GACT-TT
i Hylobates_agilis.k141_1136966                         C 0 C 0
s Hylobates_klossii.k141_468230                              3856  7 +      5464 A-----------GACC-TT
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14629202  7 -  25970782 A-----------GACC-TT
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            1754  7 +      4161 A-----------GACC-TT
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                    10162  7 +     22540 A-----------GAAC-AT
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7131000  7 +  13083262 A-----------GACC-TT
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              14329  7 +     17520 A-----------GACC-TT
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8579788  7 +  11848649 A-----------GATC-AT
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               28964  7 +     37189 A-----------GACC-TT
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          54654  7 -    147782 A-----------GACC-TT
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    7041  7 +     26176 A-----------GACA-TT
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3092873  7 -   3498232 A-----------GAGC-TT
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    21628  3 +     22452 G-----------TA-----
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            141269  7 +   3060487 A-----------GACC-TT
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19253090  7 +  19376315 A-----------GACC-TT
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           15887  7 +     84689 A-----------GACT-TT
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3783625  7 +   6799190 A-----------GACT-TT
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20599423  7 -  62548349 A-----------GACT-TT
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11096640  3 +  39895028 A-----------GA-----
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             24841  7 +     74745 A-----------GACC-TT
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12711302  7 +  12821369 A-----------GACC-TT
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                3875  7 -     26467 A-----------GACC-TT
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           51746  7 +     63263 A-----------GACC-TT
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 3856  7 -     26361 A-----------GACC-TT
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 7046  7 -      7381 A-----------GACC-TT
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  50275  7 -     79256 A-----------GACC-TT
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196040373  7 + 196197964 A-----------GACC-TT
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11450543  7 +  11645122 A-----------GACC-TT
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   9229  7 -     46448 A-----------GACC-TT
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                6892  7 -     13212 A-----------GACC-TT
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 20572  7 -     55006 A-----------GACC-TT
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43845687  7 +  43892939 A-----------GACC-TT
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               21856  7 -     24607 A-----------GACC-TT
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               9226  7 -     27140 A-----------GACC-TT
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4376               200524  3 +    248908 A-----------GA-----
i Macroglossus_sobrinus.MacSob_scaffold_4376            I 24 C 0
s Mandrillus_leucophaeus.scaffold125                     43442262  7 -  43563597 A-----------GACC-TT
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4455066  7 -   4543643 A-----------GACC-TT
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            153631  7 +    252755 A-----------GAGC-TT
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             41229  7 +     58827 A-----------GAGC-TT
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36878867  7 +  64221397 A-----------GACC-TT
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       67128  3 -    234502 A-----------GA-----
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             8021  7 -     87323 A-----------GAGC-TT
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 2857  7 +    115071 G-----------GACC-TT
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1052444  7 -  26018355 G-----------GACC-TT
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    3920  7 -     12939 G-----------GACC-TC
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  42104  7 -     48017 A-----------GGGT-TT
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               26447  7 -     32043 A-----------GACC-TT
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22825449  7 -  98408828 G-----------GACC-TT
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8214617  7 +  10048721 A-----------GGCC-TT
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            39075  7 +     45743 a-----------ggcc-tt
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         6808  7 +     29742 A-----------GACC-TT
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        18369  7 -    104932 A-----------GAGC-TT
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 151695  7 +    154973 A-----------GACC-TT
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                164963  7 +    265003 A-----------GGCC-TT
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  8497  3 -     19904 A-----------GA-----
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  151851  7 -    168139 A-----------GACC-AT
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          25783  7 -    100666 A-----------GACC-TT
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70772688  7 +  92629107 G-----------GACC-TT
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75494740  7 +  98207768 A-----------GACC-TT
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67561492  7 +  89017189 G-----------GATC-TT
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74337463  7 +  97876770 A-----------GACC-TT
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             15505  7 +     98495 A-----------GCCT-TT
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4430128  7 -  28371801 A-----------GAGC-TT
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     96271  7 -    117718 A-----------AACC-CT
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               972797  7 +   8389877 A-----------GACC-TT
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5023873  7 +   6462685 A-----------GACC-TT
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3470302  7 -   3747815 A-----------GACC-TT
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        15535  7 +     66751 A-----------GACC-TT
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             8286  7 -      8794 A-----------GATT-TT
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            125187  7 +    362372 A-----------TACC-TT
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4491764  7 -  14209539 A-----------GAGC-TT
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3956286  7 -   4490290 A-----------GACC-TT
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  52277  7 +     94413 A-----------GACC-TT
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_762468                             873  7 -      2755 A-----------GACC-TT
i Nomascus_annamensis.k141_762468                       C 0 C 0
s Nomascus_concolor.k141_256540                              7485  7 -      8966 A-----------GACC-TT
i Nomascus_concolor.k141_256540                         C 0 C 0
s Nomascus_gabriellae.k141_1400361                           1424  7 -      2203 A-----------GACC-TT
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_453                             6736  7 +     12787 A-----------GACC-TT
i Nomascus_siki_b.tarseq_453                        C 0 C 0
s Nomascus_siki_a.k141_421408                                  1338  7 +     16235 T-----------GACC-TT
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                39509  3 +   3668941 A-----------GG-----
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65572659  7 -  95554990 a-----------gact-gt
i Nycticebus_bengalensis.LG16                           I 108 C 0
s Nycticebus_coucang.k141_6040852                             296  7 +      1868 a-----------gact-gt
i Nycticebus_coucang.k141_6040852                       I 135 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65680844  7 +  89412551 a-----------gact-tt
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     I 105 C 0
s Ochotona_princeps.JH802095.1                            5000722  3 -  23139505 A-----------GG-----
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3691608  7 +  10294119 A-----------AACC-CT
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             686462  7 -   3126709 A-----------GGGC-TT
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1085476  3 +   1425656 A-----------GA-----
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         43541  3 +     78940 A-----------GA-----
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  131251  7 +    145789 G-----------GACC-TT
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  44167  7 +     62360 C-----------GACC-TT
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7229967  7 -   7562323 A-----------GACC-TT
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              64820  7 -     66828 A-----------GACT-TT
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141884644  3 + 163896628 G-----------GA-----
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      316647  3 -    505867 A-----------GA-----
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        5786  7 -     53940 A-----------GACT-TT
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18013755  7 -  38779656 A-----------GACT-TT
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134084733  3 - 275406953 A-----------GA-----
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      85971  3 +    140051 A-----------GA-----
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127579164  7 - 205426864 A-----------GACC-TT
i Pan_paniscus.CM003386.1                               C 0 I 3
s Pan_troglodytes.CM009241.2                            120156324  7 - 196562556 A-----------GACC-TT
i Pan_troglodytes.CM009241.2                            C 0 I 3
s Panthera_onca.PanOnc_flattened_line_1615                  41404  7 +    295523 A-----------GAAC-AT
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3645220  7 +  18214204 A-----------GAAC-AT
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5034861  7 -   6340057 A-----------GAAC-AT
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1073603  3 -   1292953 A-----------GA-----
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188161051  7 - 188283584 A-----------GACC-TT
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              4141  7 +     25005 A-----------GACC-TT
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47518423  7 +  47705337 A-----------GACC-TT
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 72414  7 -    104429 A-----------GACC-TT
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   10946  7 +     14967 A-----------GACC-TT
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 6811  7 -      7628 A-----------GACC-TT
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    122874  7 -    135482 A-----------GACC-AT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          11450  7 -     23713 A-----------GGCC-TT
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           12601  7 +     61070 A-----------GGCC-TT
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       2921  7 +     49596 A-----------AACT-GT
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615458.1                       2840034  7 -   3366660 G-----------GAcc-tt
i Peromyscus_maniculatus.KI615458.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    17611  7 -     36578 A-----------GACT-CC
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              4427  7 +      8220 A-----------GACC-TT
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306           101055  5 +    112873 A-----------GAC---T
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990          10909  7 +     21690 A-----------GACC-TT
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       26745  7 +     44506 A-----------GACC-TT
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        26958  7 +     67491 A-----------GATC-TT
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      17197  7 -     98129 A-----------GACC-TT
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     26798  7 +    147771 A-----------GACC-TT
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         3433  7 -     43940 A-----------GACC-TT
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          7516  7 -     55515 A-----------GACC-TT
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         26870  7 +    152463 A-----------GACC-TT
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       4678  7 -    119457 A-----------GACC-TT
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         16592  7 +    134592 A-----------GACC-TT
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          27180  7 -     75465 A-----------GACC-TT
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              191795  7 -    373494 A-----------GACC-TT
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19812442  7 +  19899266 A-----------GACC-TT
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                4604  7 -      9567 A-----------GACT-TT
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Psammomys_obesus.NESX01026517.1                           39834  7 +     77221 G-----------GACC-TT
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            7615  7 -     27784 A-----------GACC-TT
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        251771  7 -    344369 A-----------GAGC-TT
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13248423  3 -  17261082 A-----------GA-----
i Pteropus_alecto.KB031157.1                            C 0 I 157
s Pteropus_vampyrus.KN525959.1                             606373  3 -   3946241 A-----------GA-----
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131541339  7 - 161321710 A-----------GACC-AT
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                22320  3 +     68503 A-----------GA-----
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13918438  7 +  90463843 G-----------GACC-TT
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1794243  3 +   2252614 A-----------AA-----
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                21769  3 +    109198 A-----------GA-----
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                      3000  3 -      4338 A-----------GA-----
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15677202  7 -  43202129 A-----------GACC-TT
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        9115  7 +     34089 A-----------GACC-TT
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              9055  7 -     60842 A-----------GACC-TT
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              9149  7 +     67014 A-----------GACC-TT
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              9126  7 +     60816 A-----------GACC-TT
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 9063  7 -     76454 A-----------GACC-TT
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17345848  7 -  30362882 A-----------GACC-TT
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         25169  7 -     62485 A-----------GACC-TT
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   41055  7 -    114521 A-----------GACT-TT
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  106335  7 -    120886 G-----------GACC-TT
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            25708  7 +    739146 A-----------AACC-GT
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17775847  7 -  27805282 A-----------GACC-AT
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2244701  7 +   2842873 A-----------GACC-TT
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             240546  7 -    276980 A-----------GAGC-TT
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            34741  7 +     62062 A-----------GACC-AT
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189276746  7 + 218635234 A-----------GACC-TA
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        19461  7 -  13920577 A-----------GACC-TT
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                3868  7 +     20549 A-----------GACC-TT
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               17960  7 +     45698 A-----------GATT-TT
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      812323  5 +   1148477 A-----------GAC---T
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  62966  5 +     99546 A-----------GAC---T
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194012584  7 - 194193292 A-----------GACC-TT
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                  1146  7 -      3104 A-----------GACC-TT
i Tolypeutes_matacus.TolMat_scaffold_475685             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  139622  7 -    259118 A-----------GACC-TT
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                  10308  7 +     90398 A-----------GACC-TT
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 I 176
s Trichechus_manatus.JH594618.1                          16090494  7 +  31416278 A-----------GACT-TT
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2801763  7 -   3938065 A-----------CACT-TG
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                   10586  7 +     13056 A-----------CACT-TG
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69318697  7 -  96451834 A-----------GACC-TT
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                    1443  7 +    136657 A-----------AATC-TT
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 C 0
s Ursus_maritimus.KK498671.1                              6522195  7 +  28682327 A-----------GAGC-TT
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                 10061 18 -     20643 AGTTTGTTAACTGACC-TT
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             29596 18 -     33872 AGTTTGTTAACTGACC-TT
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1529727  7 -   2331223 A-----------GACC-TT
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                145874  3 -    281493 A-----------GA-----
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       132196  7 -    134049 A-----------GACC-TT
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        221320  7 -    227762 A-----------GGGC-TT
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_202118                     1870  7 -      3360 A-----------GAAC-AT
i Zapus_hudsonius.ZapHud_scaffold_202118                C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            3282  7 -     13665 A-----------GACC-TC
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Hylobates_pileatus_a.tarseq_592                             37267 2881 -     60944 I
e Trachypithecus_pileatus.k141_532233                       30126  0 -     40754 I
e Trachypithecus_phayrei.ctg364                            232455  0 -   1198723 I
e Trachypithecus_obscurus.k141_411399                         131  0 +     12010 I
e Trachypithecus_melamera.k141_950981                        2232  0 -      3512 I
e Trachypithecus_leucocephalus.k141_352489                   1214  0 +      9423 I
e Trachypithecus_laotum.k141_897381                         45646  0 -     53586 I
e Trachypithecus_hatinhensis.k141_641377                     1240  0 +      1365 I
e Trachypithecus_germaini.k141_240878                        5067  3 -     24955 I
e Trachypithecus_geei.k141_137495                           30106  0 -     42322 I
e Trachypithecus_francoisi.k141_1012484                       874  0 +      8809 I
e Trachypithecus_cristatus.k141_968903                      32589  3 +     43409 I
e Trachypithecus_crepusculus.k141_863597                     4944  0 -     23436 I
e Trachypithecus_auratus.k141_672638                         4947  3 +     38635 I
e Tarsius_wallacei.k141_48636                               64696  0 +     65473 C
e Tarsius_lariang.k141_609102                               31387  0 +     42269 C
e Semnopithecus_vetulus.k141_748269                          4706  0 +     17284 I
e Semnopithecus_schistaceus.k141_628310                     45652  0 -     53123 I
e Semnopithecus_priam.k141_368201                           10107  0 -     20692 I
e Semnopithecus_johnii.k141_1300894                          1368  0 +     13764 I
e Semnopithecus_hypoleucos.k141_2141024                      1351  0 -      8815 I
e Semnopithecus_entellus.k141_1743075                       45578  0 +     45790 I
e Rhinopithecus_strykeri.ctg241                            462135  0 +   1472273 I
e Rhinopithecus_bieti.k119_554384                            2917  0 -     17045 C
e Pygathrix_nigripes_a.k141_758202                             3050  0 -      8240 I
e Pygathrix_nigripes_b.ctg25                                14340869  0 -  15297009 I
e Pygathrix_cinerea.k141_951151                              3033  0 -      8225 I
e Propithecus_verreauxi.k141_158021                         44062  0 -     48185 C
e Propithecus_tattersalli.k141_907138                       21799  0 -     53241 C
e Propithecus_perrieri.k141_7554                            22138 16 +     27322 I
e Propithecus_edwardsi.k141_1317105                         40215 16 -     44753 I
e Propithecus_diadema.k141_577245                           47828 16 +     52369 I
e Propithecus_coronatus.k141_1353159                         8510  0 +     11805 C
e Propithecus_coquerelli.NW_012147863.1                     22216  0 -     30946 C
e Prolemur_simus.MPIZ01000048.1                           6853407  0 +  12164890 C
e Presbytis_mitrata.k141_1767317                            10996  0 +     15869 I
e Presbytis_comata.k141_678168                              11007  0 +     11126 I
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000342.1                3428480  0 -   4356645 I
e Piliocolobus_kirkii.k141_451083                            4879  0 -     13367 I
e Piliocolobus_gordonorum.k141_736355                       29715  0 +     67079 I
e Piliocolobus_badius.k141_512007                           29798  0 +     37672 I
e Nasalis_larvatus.k141_1382660                              4275  0 +      5784 I
e Mirza_zaza.k141_593947                                     5766  0 -     12809 C
e Microcebus_murinus.CM007691.1                          16515083  0 +  47401472 C
e Lepilemur_septentrionalis.k141_710646                      3148  0 -     13103 C
e Lepilemur_ruficaudatus.k141_574529                        37102  0 -     38897 C
e Lepilemur_dorsalis.k141_134267                            58722  0 +     63517 C
e Lepilemur_ankaranensis.k141_884009                        29358  0 +     39228 C
e Lemur_catta.scaffold_1                                258412036  0 - 285822530 C
e Indri_indri.k141_2197838                                   2204 16 +      3484 I
e Hapalemur_occidentalis.k141_797938                        50358  0 -     54384 C
e Hapalemur_meridionalis.k141_186231                        33735  0 -     42470 C
e Hapalemur_griseus.k141_1387522                            10486  0 +     56096 C
e Hapalemur_gilberti.k141_279011                             5159  0 -     11661 C
e Hapalemur_alaotrensis.k141_1280836                         6681  0 +     10286 C
e Eulemur_sanfordi.k141_186399                              20682  0 -     29447 C
e Eulemur_rufus.k141_1620292                                37941  0 +     46535 C
e Eulemur_rubriventer.k141_411740                           23209  0 +     26808 C
e Eulemur_mongoz.k141_825972                                20753  0 +     27497 C
e Eulemur_macaco.k141_747087                                 4078  0 -     19505 C
e Eulemur_fulvus.k141_653297                                16095  0 +    109717 C
e Eulemur_flavifrons.k141_903901                            12610  0 +     60246 C
e Eulemur_coronatus.k141_3240342                            16288  0 +     36558 C
e Eulemur_collaris.k141_1015201                              3151  0 -      4292 C
e Eulemur_albifrons.k141_715837                              9892  0 +     13586 C
e Colobus_polykomos.k141_1178012                               88  3 -     11758 I
e Colobus_guereza.LG08                                   96946830  0 - 156195979 I
e Colobus_angolensis.KN983490.1                            283936  0 +    886210 I
e Cheirogaleus_medius.k141_133808                           12938  0 +     13308 C
e Cheirogaleus_major.k141_1157592                           63818  0 -     68416 C
e Cephalopachus_bancanus.k141_702587                        12545  0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530  0 +    345090 C
e Avahi_peyrierasi.k141_798820                               5218  0 +      6337 C
e Avahi_laniger.k141_2840928                                11602  0 -     16375 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               18195 3 +    209709 A--TC
s Acinonyx_jubatus.LLWD01000356.1                         2040991 3 +   3721120 A--CT
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    118683 3 -    189883 A--GA
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 I 21
s Ailuropoda_melanoleuca.LNAT01000321.1                  10664934 3 +  23371972 A--CT
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7101887 3 -  16596857 A--CT
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_141108                   2048 3 -      7259 A--CA
i Allactaga_bullata.AllBul_scaffold_141108              C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   6068 3 -     60446 A--CC
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         6784 3 -     29318 A--CC
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         5722 3 +     38766 A--CC
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          6678 3 -     80423 A--CC
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              1657 3 +     19852 A--CC
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                3901 3 -     12443 A--CC
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                             1200 3 +      5070 A--CC
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                  945 3 -      1641 A--CC
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          3684 3 -     24210 A--CC
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_494922                              188 3 -      8325 A--CC
i Alouatta_nigerrima.k141_494922                        C 0 C 0
s Alouatta_palliata.k141_405616                              6102 3 +     16794 A--CC
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_1602819                            1234 3 -      1470 A--CC
i Alouatta_puruensis.k141_1602819                       C 0 C 0
s Alouatta_seniculus.k141_790278                             5379 3 -      9835 A--CC
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3528127 3 +   4113121 C--CA
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      394215 1 -    631301 ----T
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             5288 3 +     55446 C--CT
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 66987 3 +     78111 A--CC
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                            9931 3 +     22701 A--CC
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5753898 3 +   9889416 A--CC
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                            10497 3 -    104377 A--CC
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                              10504 3 +     23246 A--CC
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     3163 3 +     11424 A--TA
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 I 24
s Arctocebus_calabarensis.k141_587554                        7079 3 +      9265 A--TC
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                12506 3 -     29036 A--CT
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9543789 3 +  39197703 A--CC
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             65063 3 +     85812 A--CC
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                16076 3 +     89302 A--CC
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             20577 3 -     58268 A--CC
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             68571 3 +    119057 A--CC
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              10540 3 -     25888 A--CC
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                11602 3 -     16375 A--CC
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               5218 3 +      6337 A--CC
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26385512 3 +  51448160 A--CT
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                       10685 3 -     13118 A--CT
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   50096 3 -     72089 C--CA
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   305046 3 -   6870073 C--CA
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22959152 3 + 161108492 C--CA
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     421331 3 +    998990 C--CA
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22667804 3 + 158972876 C--CA
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               676642 3 +   1914593 C--CA
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               118440 3 -    171031 A--CC
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 17460 3 +    125063 A--CC
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                19507 3 -    216513 A--CC
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       12050 3 -    134917 A--CC
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3224626 3 -   8989139 A--CC
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           402326 3 -  15254737 A--CC
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2978064 3 +   6889770 A--CC
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11527793 2 +  39901454 ---AT
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   22767 2 +     87036 ---AT
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11274690 2 -  35597290 ---AT
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11097187 2 +  39895921 ---AT
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16463972 2 -  44759192 ---AT
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21335560 3 + 157394656 C--CA
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135713913 3 - 157403528 C--CA
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_780116                   175 3 +      1571 A--CA
i Capromys_pilorides.CapPil_scaffold_780116             C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               63500 3 +     67245 A--CT
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_1326                      613 3 -    202837 C--AA
i Castor_canadensis.CasCan_scaffold_1326                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   164361 3 -    276539 A--CT
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15790311 3 -  24422027 A--TG
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15802250 3 -  24440124 A--TG
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       180422 3 +    436027 A--TG
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18896167 3 -  29618158 A--CC
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                12817 3 -     26817 A--CC
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                17061 3 +     25043 A--CC
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4369596 3 +   7569818 A--CT
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Cercocebus_atys.KQ010443.1                              6560008 3 +   6739814 A--CC
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      31485 3 +     60454 A--CC
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          6689 3 -     21101 A--CC
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         63999 3 -    107033 A--CC
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        6862 3 -     17608 A--CC
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          4027 3 +     45019 A--CC
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           4303 3 +     15177 A--CC
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          6909 3 +     16677 A--CC
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           29099 3 +     35983 A--CC
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11995630 3 +  12117833 A--CC
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46482606 3 +  46592721 A--CC
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                        723 3 -     27215 A--CC
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       6923 3 +     35577 A--CC
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        6717 3 -     25661 A--CC
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        6889 3 -     17744 A--CC
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        26258 3 +     37128 A--CC
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           5307 3 -      6963 A--CC
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           63818 3 -     68416 A--CC
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                           12938 3 +     13308 A--CC
i Cheirogaleus_medius.k141_133808                       C 0 C 0
s Cheracebus_lucifer.k141_619653                            10103 3 -     18223 A--CC
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              1841 3 +    188999 A--CC
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           46140 3 +     57117 A--CC
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          50820 3 +     54541 A--CC
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15965006 3 +  43084221 A--ca
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         75621 3 +    196370 A--CC
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          19802 3 +     40510 A--CC
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15144443 3 -  15256731 A--CC
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      38907 3 -     53260 A--CC
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101149466 3 + 101219884 A--CC
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                19319 3 -     21363 A--CC
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           764623 3 +    964067 A--CC
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_954668              1551 3 -      1738 A--CT
i Chrysochloris_asiatica.ChrAsi_scaffold_954668         C 0 C 0
s Condylura_cristata.JH655880.1                          60623628 3 +  78930452 A--CT
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         4016 2 -      5782 ---TT
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 283586 3 -    399297 A--TA
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53035888 3 +  72327488 A--Ca
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              3518 3 -     22648 A--CT
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            59002 3 -     70449 A--CT
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  214888 3 -    956709 A--CA
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 36557 3 -     67205 G--CA
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                21499 3 +     26546 A--CA
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             62639 3 -    236241 A--TA
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          186353 3 -   6883506 A--CC
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16849764 3 +  31942871 A--CC
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80042109 3 -  96802777 A--CT
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.PEHR01015603.1                            400 3 +       472 A--CT
i Desmodus_rotundus.PEHR01015603.1                      C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 327995 3 +    993696 A--CT
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   8629 3 +    151128 A--CT
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   160483 3 +    228994 A--CA
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3660933 3 +   4240102 A--TA
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  3307 3 -     11986 A--TA
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                41208 3 -     73477 A--AA
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           23000543 3 -  44670279 A--CC
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.AWHC01235761.1                              3589 2 -      8619 ---CT
i Eidolon_helvum.AWHC01235761.1                         C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1498041 3 +   1727528 A--CA
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7834796 3 +  15467074 a--tc
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        244631 3 -    369425 A--CA
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01076532.1                            975 3 +      9159 A--CA
i Ellobius_talpinus.LOJH01076532.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85878934 3 +  99434291 A--TT
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4710481 3 +   6522550 A--TT
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5857855 3 -   7175178 A--CT
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13356341 3 +  41866177 A--CT
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          17831 3 +     92910 A--CT
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11543010 3 +  16010500 A--CT
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48781476 3 -  48907691 A--CC
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          320356 3 +    330699 A--CT
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             66812 3 +     89355 A--CT
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              9892 3 +     13586 A--CT
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_1015201                              3151 3 -      4292 A--CT
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            16288 3 +     36558 A--CT
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            12610 3 +     60246 A--CT
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                16095 3 +    109717 A--CT
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 4078 3 -     19505 A--CT
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                20753 3 +     27497 A--CT
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           23209 3 +     26808 A--CT
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                37941 3 +     46535 A--CT
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              20682 3 -     29447 A--CT
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.AANG03202589.1                                  457 3 -       609 A--CT
i Felis_catus.AANG03202589.1                            C 0 C 0
s Felis_catus_fca126.CM031420.1                         129287386 3 - 158578461 A--CT
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 28489 3 +     52776 A--CT
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13896780 3 -  19261668 A--CA
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     215931 3 -    847004 A--TC
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           18292 3 -     43889 A--TC
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          15436 3 +     27357 A--TC
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               160208 3 +    324696 A--CC
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    187821 3 -    189561 C--CT
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           17105 3 -     18683 A--CA
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                               9892 3 -     14630 A--TC
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119656992 3 - 195582420 A--TC
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   80420 3 +    118900 A--AA
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         6681 3 +     10286 A--CT
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             5159 3 -     11661 A--CT
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                            10486 3 +     56096 A--CT
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        33735 3 -     42470 A--CT
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        50358 3 -     54384 A--CT
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              24119 3 +     53719 A--CT
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                34951 3 -     91191 C--CA
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2561277 3 +  31725842 A--CA
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               63505 3 +     73687 A--TT
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              152163 3 +    277961 A--CT
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      285191 2 -    477199 ---CT
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959               2877 2 +     26078 ---CT
i Hipposideros_galeritus.HipGal_scaffold_52959          C 0 C 0
s Hoolock_leuconedys.ctg79                                      9803 3 -   7690867 A--CC
i Hoolock_leuconedys.ctg79                                 C 0 I 52
s Hyaena_hyaena.HyaHya_flattened_line_20729                 24559 3 -     67322 A--CT
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           21875 3 -    119109 A--CA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_1816750                             2374 3 +      3202 A--GC
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1136966                               383 3 +      9785 A--CC
i Hylobates_agilis.k141_1136966                         C 0 C 0
s Hylobates_klossii.k141_468230                              3863 3 +      5464 A--GC
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14629209 3 -  25970782 A--CC
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            1761 3 +      4161 A--GC
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                    10169 3 +     22540 A--CA
i Hystrix_cristata.HysCri_scaffold_50788                C 0 I 27
s Ictidomys_tridecemlineatus.JH393315.1                   7131007 2 +  13083262 ---CG
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 I 24
s Indri_indri.k141_2197838                                   2220 3 +      3484 A--CC
i Indri_indri.k141_2197838                              I 16 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              14336 3 +     17520 A--CT
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 I 22
s Jaculus_jaculus.JH725517.1                              8579795 3 +  11848649 A--CA
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               28971 1 +     37189 A----
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          54661 3 -    147782 A--CC
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    7048 3 +     26176 A--TT
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258412036 3 - 285822530 A--CT
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        29358 3 +     39228 A--CC
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            58722 3 +     63517 A--CC
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        37102 3 -     38897 A--CC
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      3148 3 -     13103 A--CC
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3092880 3 -   3498232 A--AT
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    21631 2 +     22452 ---CT
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            141276 3 +   3060487 A--CT
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19253097 3 +  19376315 A--CC
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           15894 3 +     84689 A--TC
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3783632 3 +   6799190 A--TC
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20599430 3 -  62548349 A--CC
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11096643 2 +  39895028 ---AT
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             24848 3 +     74745 A--CC
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12711309 3 +  12821369 A--CC
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                3882 3 -     26467 A--TC
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           51753 3 +     63263 A--CC
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 3863 3 -     26361 A--TC
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 7053 3 -      7381 A--CC
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  50282 3 -     79256 A--CC
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196040380 3 + 196197964 A--TC
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11450550 3 +  11645122 A--CC
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   9236 3 -     46448 A--CC
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                6899 3 -     13212 A--CC
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 20579 3 -     55006 A--CC
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43845694 3 +  43892939 A--CC
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               21863 3 -     24607 A--CC
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               9233 3 -     27140 A--CC
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4376               200527 2 +    248908 ---CT
i Macroglossus_sobrinus.MacSob_scaffold_4376            C 0 I 114
s Mandrillus_leucophaeus.scaffold125                     43442269 3 -  43563597 A--CC
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4455073 3 -   4543643 A--CC
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            153638 3 +    252755 A--CT
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             41236 3 +     58827 A--CT
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36878874 2 +  64221397 ---TG
i Marmota_marmota.CZRN01000005.1                        C 0 I 24
s Megaderma_lyra.MegLyr_scaffold_3562                       67131 2 -    234502 ---CT
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             8028 3 -     87323 A--TT
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 2864 3 +    115071 A--TA
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1052451 3 -  26018355 G--Ca
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    3927 3 -     12939 A--CT
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16515083 3 +  47401472 A--CC
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  42111 5 -     48017 AAATC
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               26454 3 -     32043 A--CT
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22825456 3 -  98408828 A--CA
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8214624 3 +  10048721 a--ct
i Miniopterus_natalensis.LDJU01000022.1                 C 0 I 178
s Miniopterus_schreibersii.MinSch_scaffold_24116            39082 3 +     45743 a--ct
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 I 178
s Miopithecus_ogouensis.k141_2935907                         6815 3 +     29742 A--CC
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        18376 3 -    104932 A--AT
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     5766 3 -     12809 A--CC
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 151702 3 +    154973 A--CT
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                164970 3 +    265003 A--CT
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  8500 3 -     19904 C--CA
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  151858 3 -    168139 A--CT
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          25790 3 -    100666 A--CT
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70772695 3 +  92629107 A--GA
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75494747 3 +  98207768 A--GA
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67561499 3 +  89017189 T--TA
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74337470 3 +  97876770 A--GA
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             15512 3 +     98495 A--CA
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4430135 3 -  28371801 A--TT
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     96278 3 -    117718 G--CA
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               972804 3 +   8389877 A--CT
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5023880 3 +   6462685 A--CT
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3470309 3 -   3747815 A--CT
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        15542 3 +     66751 A--CT
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             8293 3 -      8794 A--CC
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            125194 3 +    362372 A--TA
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4491771 3 -  14209539 A--AT
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3956293 3 -   4490290 A--CT
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  52284 3 +     94413 A--CT
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_762468                             880 3 -      2755 A--CC
i Nomascus_annamensis.k141_762468                       C 0 C 0
s Nomascus_concolor.k141_256540                              7492 3 -      8966 A--CC
i Nomascus_concolor.k141_256540                         C 0 C 0
s Nomascus_gabriellae.k141_1400361                           1431 3 -      2203 A--CC
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_453                             6743 3 +     12787 A--CC
i Nomascus_siki_b.tarseq_453                        C 0 C 0
s Nomascus_siki_a.k141_421408                                  1345 3 +     16235 A--CC
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                39512 2 +   3668941 ---AT
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65572666 3 -  95554990 a--tc
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_6040852                             303 3 +      1868 a--tc
i Nycticebus_coucang.k141_6040852                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65680851 3 +  89412551 a--tc
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            5000725 2 -  23139505 ---CA
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3691615 3 +  10294119 G--CA
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             686469 3 -   3126709 A--AT
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1085479 3 +   1425656 C--CA
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         43544 3 +     78940 C--CT
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  131258 3 +    145789 A--CA
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  44174 3 +     62360 A--CA
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7229974 3 -   7562323 A--CT
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              64827 3 -     66828 A--CT
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141884647 2 + 163896628 ---CT
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      316650 2 -    505867 ---AT
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        5793 3 -     53940 A--TC
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18013762 3 -  38779656 A--TC
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134084736 3 - 275406953 C--CA
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      85974 3 +    140051 C--CA
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.AJFE02000020.1                                 204 3 -      1352 A--TC
i Pan_paniscus.AJFE02000020.1                           I 33 I 164
s Pan_troglodytes.KZ622857.1                               334100 3 +    772158 A--TC
i Pan_troglodytes.KZ622857.1                            I 50 I 390
s Panthera_onca.PanOnc_flattened_line_1615                  41411 3 +    295523 A--CT
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3645227 3 +  18214204 A--CT
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5034868 3 -   6340057 A--CT
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1073606 3 -   1292953 C--CA
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188161058 3 - 188283584 A--CC
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              4148 3 +     25005 A--CC
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47518430 3 +  47705337 A--CC
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 72421 3 -    104429 A--CC
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   10953 3 +     14967 A--CC
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 6818 3 -      7628 A--CC
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    122881 3 -    135482 A--CT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          11457 3 -     23713 A--TC
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           12608 3 +     61070 A--TC
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       2928 3 +     49596 A--CA
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615458.1                       2840041 3 -   3366660 a--ca
i Peromyscus_maniculatus.KI615458.1                     C 0 I 24
s Petromus_typicus.PetTyp_scaffold_33007                    17618 3 -     36578 A--CA
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              4434 3 +      8220 A--CT
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306           101060 3 +    112873 A--TT
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990          10916 3 +     21690 A--CT
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       26752 3 +     44506 A--CC
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        26965 3 +     67491 A--CC
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      17204 3 -     98129 A--CC
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     26805 3 +    147771 A--CC
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         3440 3 -     43940 A--CC
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          7523 3 -     55515 A--CC
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         26877 3 +    152463 A--CC
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       4685 3 -    119457 A--CC
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         16599 3 +    134592 A--CC
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          27187 3 -     75465 A--CC
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              191802 3 -    373494 A--TC
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19812449 3 +  19899266 A--TC
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                4611 3 -      9567 A--CT
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6853407 3 +  12164890 A--CT
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     22216 3 -     30946 N--NN
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         8510 3 +     11805 A--CC
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           47844 3 +     52369 A--CC
i Propithecus_diadema.k141_577245                       I 16 C 0
s Propithecus_edwardsi.k141_1317105                         40231 3 -     44753 A--CC
i Propithecus_edwardsi.k141_1317105                     I 16 C 0
s Propithecus_perrieri.k141_7554                            22154 3 +     27322 A--CC
i Propithecus_perrieri.k141_7554                        I 16 C 0
s Propithecus_tattersalli.k141_907138                       21799 3 -     53241 A--CA
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         44062 3 -     48185 A--CA
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           39841 3 +     77221 G--TA
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            7622 3 -     27784 A--CT
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        251778 3 -    344369 A--TT
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB030474.1                              8976812 2 -  19980961 ---CT
i Pteropus_alecto.KB030474.1                            I 29 C 0
s Pteropus_vampyrus.KN525959.1                             606376 2 -   3946241 ---CT
i Pteropus_vampyrus.KN525959.1                          C 0 I 121
s Puma_concolor.QAVW01000427.1                          131541346 3 - 161321710 A--CT
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                22323 3 +     68503 C--CA
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13918445 3 +  90463843 T--AA
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1794246 2 +   2252614 ---CT
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                21772 2 +    109198 ---CT
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 I 49
s Saiga_tatarica.SaiTat_scaffold_371890                      3003 3 -      4338 C--CA
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15677209 3 -  43202129 A--CC
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        9122 3 +     34089 A--CC
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              9062 3 -     60842 A--CC
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              9156 3 +     67014 A--CC
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              9133 3 +     60816 A--CC
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 9070 3 -     76454 A--CC
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17345855 3 -  30362882 A--CC
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         25176 3 -     62485 A--CC
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   41062 3 -    114521 A--CT
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  106342 3 -    120886 A--TA
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            25715 3 +    739146 A--CT
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17775854 3 -  27805282 A--Gt
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2244708 2 +   2842873 ---CG
i Spermophilus_dauricus.KZ294190.1                      C 0 I 24
s Spilogale_gracilis.SpiGra_flattened_line_905             240553 3 -    276980 A--CT
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            34748 3 +     62062 A--CT
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189276753 3 + 218635234 A--AT
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        19468 3 -  13920577 A--CC
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                3875 3 +     20549 A--CT
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               17967 3 +     45698 A--CC
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      812328 3 +   1148477 A--CT
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  62971 3 +     99546 A--CT
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194012591 3 - 194193292 A--CC
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                  1153 3 -      3104 A--CC
i Tolypeutes_matacus.TolMat_scaffold_475685             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  139629 3 -    259118 A--CT
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                  10491 3 +     90398 C--CT
i Tragulus_javanicus.TraJav_scaffold_14717              I 176 C 0
s Trichechus_manatus.JH594618.1                          16090501 3 +  31416278 A--CC
i Trichechus_manatus.JH594618.1                         C 0 I 21
s Tupaia_chinensis.KB320831.1                             2801770 3 -   3938065 A--CT
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                   10593 3 +     13056 A--CT
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69318704 3 -  96451834 A--CT
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                    1450 3 +    136657 A--TT
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 C 0
s Ursus_maritimus.KK498671.1                              6522202 3 +  28682327 A--CT
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                 10079 3 -     20643 A--CT
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             29614 3 -     33872 A--CT
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1529734 3 -   2331223 A--CC
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                145877 2 -    281493 ---AT
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       132203 3 -    134049 A--CA
i Xerus_inauris.XerIna_scaffold_7898                    C 0 I 24
s Zalophus_californianus.ZalCal_flattened_line_4097        221327 3 -    227762 A--AT
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_202118                     1877 3 -      3360 A--CA
i Zapus_hudsonius.ZapHud_scaffold_202118                C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            3289 3 -     13665 A--CT
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Hylobates_pileatus_a.tarseq_592                             37267 2881 -     60944 I
e Trachypithecus_pileatus.k141_532233                       30126 0 -     40754 I
e Trachypithecus_phayrei.ctg364                            232455 0 -   1198723 I
e Trachypithecus_obscurus.k141_411399                         131 0 +     12010 I
e Trachypithecus_melamera.k141_950981                        2232 0 -      3512 I
e Trachypithecus_leucocephalus.k141_352489                   1214 0 +      9423 I
e Trachypithecus_laotum.k141_897381                         45646 0 -     53586 I
e Trachypithecus_hatinhensis.k141_641377                     1240 0 +      1365 I
e Trachypithecus_germaini.k141_240878                        5067 3 -     24955 I
e Trachypithecus_geei.k141_137495                           30106 0 -     42322 I
e Trachypithecus_francoisi.k141_1012484                       874 0 +      8809 I
e Trachypithecus_cristatus.k141_968903                      32589 3 +     43409 I
e Trachypithecus_crepusculus.k141_863597                     4944 0 -     23436 I
e Trachypithecus_auratus.k141_672638                         4947 3 +     38635 I
e Tarsius_wallacei.k141_48636                               64696 0 +     65473 C
e Tarsius_lariang.k141_609102                               31387 0 +     42269 C
e Semnopithecus_vetulus.k141_748269                          4706 0 +     17284 I
e Semnopithecus_schistaceus.k141_628310                     45652 0 -     53123 I
e Semnopithecus_priam.k141_368201                           10107 0 -     20692 I
e Semnopithecus_johnii.k141_1300894                          1368 0 +     13764 I
e Semnopithecus_hypoleucos.k141_2141024                      1351 0 -      8815 I
e Semnopithecus_entellus.k141_1743075                       45578 0 +     45790 I
e Rhinopithecus_strykeri.ctg241                            462135 0 +   1472273 I
e Rhinopithecus_bieti.k119_554384                            2917 0 -     17045 C
e Pygathrix_nigripes_a.k141_758202                             3050 0 -      8240 I
e Pygathrix_nigripes_b.ctg25                                14340869 0 -  15297009 I
e Pygathrix_cinerea.k141_951151                              3033 0 -      8225 I
e Presbytis_mitrata.k141_1767317                            10996 0 +     15869 I
e Presbytis_comata.k141_678168                              11007 0 +     11126 I
e Pithecia_vanzolinii.k141_831006                           15424 0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514 0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521 0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292 0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093 0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038 0 +     78826 C
e Pithecia_albicans.k141_991845                             45662 0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000342.1                3428480 0 -   4356645 I
e Piliocolobus_kirkii.k141_451083                            4879 0 -     13367 I
e Piliocolobus_gordonorum.k141_736355                       29715 0 +     67079 I
e Piliocolobus_badius.k141_512007                           29798 0 +     37672 I
e Nasalis_larvatus.k141_1382660                              4275 0 +      5784 I
e Colobus_polykomos.k141_1178012                               88 3 -     11758 I
e Colobus_guereza.LG08                                   96946830 0 - 156195979 I
e Colobus_angolensis.KN983490.1                            283936 0 +    886210 I
e Cephalopachus_bancanus.k141_702587                        12545 0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530 0 +    345090 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               18198 52 +    209709 T----TATAGGAA--------GC-AAAATTAAC----A------AAT----ATT-T-TCTC-C---C---TTC-TACAAA---TGT------ATA------C-------------C-C
s Acinonyx_jubatus.LLWD01000356.1                         2040994 48 +   3721120 T----TATAGGAA--------GC-AAAATTAGCGAACA------T--------T-T-T----C---T---CCC-CATACT---CAC------ACA------A-------------A--
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    118707 24 -    189883 ---------------------------------------------------------TTCT-C---C---CTC-TACTGT---TGT------ACA------G-------------C-T
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 21 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10664937 44 +  23371972 T----TATGGGaa--------gc-aaaattaac----a------t--------t-t-t----c---t---cct-cacact---cac------aca------c-------------a--
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7101890 25 -  16596857 T----TATAGGaa--------gc-aaaattaac----a------t--------t-t-t------------------------------------------------------------
i Ailurus_fulgens.LNAC01000003.1                        C 0 I 14
s Allactaga_bullata.AllBul_scaffold_141108                   2051 28 -      7259 TTAGTTACACAGA--------GC-AAAATCAA-----A--------C----ATT----------------------------------------------------------------
i Allactaga_bullata.AllBul_scaffold_141108              C 0 I 25
s Allenopithecus_nigroviridis.k141_2469532                   6071 52 -     60446 T----TACAGGAA--------GC-AAAATTAAC----A------AAT----ATT-T-TCTC-C---C---TTC-TACAAC---TGT------ACA------C-------------C-C
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         6787 52 -     29318 T----TAATGGAA--------GC-AAAATTAAC----A------AAT----ATT-T-TCTC-C---C---TTC-TACAAC---TGT------ACA------C-------------C-C
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         5725 52 +     38766 T----TAATGGAA--------GC-AAAATTAAC----A------AAT----ATT-T-TCTC-C---C---TTC-TACAAC---TGT------ACA------C-------------C-C
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          6681 52 -     80423 T----TAATGGAA--------GC-AAAATTAAC----A------AAT----ATT-T-TCTC-C---C---TTC-TACAAC---TGT------ACA------C-------------C-C
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              1660 33 +     19852 T----TATAGGAA--------GC-AAAATTAAC----A------GAT----ATT-T-TATC-C-------------------------------------------------------
i Alouatta_belzebul.k141_276091                         C 0 I 18
s Alouatta_caraya.k141_664908                                3904 33 -     12443 T----TATAGGAA--------GC-AAAATTAAC----A------GAT----ATT-T-TATC-C-------------------------------------------------------
i Alouatta_caraya.k141_664908                           C 0 I 36
s Alouatta_discolor.k141_2023149                             1203 33 +      5070 T----TATAGGAA--------GC-AAAATTAAC----A------GAT----ATT-T-TATC-C-------------------------------------------------------
i Alouatta_discolor.k141_2023149                        C 0 I 18
s Alouatta_juara.k141_799181                                  948 33 -      1641 T----TATAGGAA--------GC-AAAATTAAC----A------GAT----ATT-T-TATC-C-------------------------------------------------------
i Alouatta_juara.k141_799181                            C 0 I 18
s Alouatta_macconnelli.k141_2318944                          3687 33 -     24210 T----TATAGGAA--------GC-AAAATTAAC----A------GAT----ATT-T-TATC-C-------------------------------------------------------
i Alouatta_macconnelli.k141_2318944                     C 0 I 18
s Alouatta_nigerrima.k141_494922                              191 33 -      8325 T----TATAGGAA--------GC-AGAATTAAC----A------GAT----ATT-T-TATC-G-------------------------------------------------------
i Alouatta_nigerrima.k141_494922                        C 0 I 18
s Alouatta_palliata.k141_405616                              6105 33 +     16794 T----TATAGGAA--------GC-AAAGTTAAC----A------GAT----ATT-T-TATC-C-------------------------------------------------------
i Alouatta_palliata.k141_405616                         C 0 I 18
s Alouatta_puruensis.k141_1602819                            1237 33 -      1470 T----TATAGGAA--------GC-AAAATTAAC----A------GAT----ATT-T-TATC-C-------------------------------------------------------
i Alouatta_puruensis.k141_1602819                       C 0 I 18
s Alouatta_seniculus.k141_790278                             5382 33 -      9835 T----TATAGGAA--------GC-AAAATTAAC----A------GAT----ATT-T-TATC-C-------------------------------------------------------
i Alouatta_seniculus.k141_790278                        C 0 I 18
s Ammotragus_lervia.NIVO01013474.1                        3528130 49 +   4113121 T----CATAGGAA--------GC-AAAATTAAC----C-A-ATAT--------T-T-T----C---T---CCT-CATATC---CAC------ACA------A-------------A-C
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      394216 28 -    631301 T----TATAAGAA--------GC-AAAATTAACCAACA------T--------T-G--------------------------------------------------------------
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 I 19
s Antilocapra_americana.AntAmePen_scaffold_27338             5291 30 +     55446 T----CATAGAAA--------GC-AAAATTAAC----T-A-ATAT--------T-T-T----C-------------------------------------------------------
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 I 19
s Aotus_azarae.k141_3170768                                 66990 33 +     78111 T----TACAGGAA--------GC-AAAATTAAC----A------AAT----ATT-T-TATC-T-------------------------------------------------------
i Aotus_azarae.k141_3170768                             C 0 I 36
s Aotus_griseimembra.k141_3275623                            9934 33 +     22701 T----TACAGGAA--------GC-AAAATTAAC----A------AAT----ATT-T-TATC-A-------------------------------------------------------
i Aotus_griseimembra.k141_3275623                       C 0 I 36
s Aotus_nancymaae.KZ196176.1                              5753901 33 +   9889416 T----TACAGGaa--------gc-aaaattaac----a------aat----att-t-tatc-t-------------------------------------------------------
i Aotus_nancymaae.KZ196176.1                            C 0 I 36
s Aotus_trivirgatus.k141_1740727                            10500 33 -    104377 T----TACAGGAA--------GC-AAAATTAAC----A------AAT----ATT-T-TATC-A-------------------------------------------------------
i Aotus_trivirgatus.k141_1740727                        C 0 I 18
s Aotus_vociferans.k141_718647                              10507 33 +     23246 T----TACAGGAA--------GC-AAAATTAAC----A------AAT----ATT-T-TATC-A-------------------------------------------------------
i Aotus_vociferans.k141_718647                          C 0 I 36
s Aplodontia_rufa.AprRuf_scaffold_101456                     3190 24 +     11424 ---------------------------------------------------------TCTC-C---C---CTC-CACACC---CAC------ACA------A-------------T-C
i Aplodontia_rufa.AprRuf_scaffold_101456                I 24 I 15
s Arctocebus_calabarensis.k141_587554                        7082 28 +      9265 T----TATAGGAA--------GCAAAA-TCAAC----A------AAC----ATT-T--------------------------------------------------------------
i Arctocebus_calabarensis.k141_587554                   C 0 I 24
s Artibeus_jamaicensis.ArtJam_scaffold_41619                12509 28 -     29036 T----TATAAGAA--------GC-AAAATTAACCAAAA------T--------T-A--------------------------------------------------------------
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 I 19
s Ateles_geoffroyi_b.tarseq_2582                             9543792 33 +  39197703 T----TATAGGAA--------GC-AAAATTAAC----A------GAT----ATT-T-TATC-C-------------------------------------------------------
i Ateles_geoffroyi_b.tarseq_2582                           C 0 I 18
s Ateles_belzebuth.k141_1348307                             65066 33 +     85812 T----TATAGGAA--------GC-AAAATTAAC----A------GAT----ATT-T-TATC-C-------------------------------------------------------
i Ateles_belzebuth.k141_1348307                         C 0 I 18
s Ateles_chamek.k141_1072810                                16079 33 +     89302 T----TATAGGAA--------GC-AAAATTAAC----A------GAT----ATT-T-TATC-C-------------------------------------------------------
i Ateles_chamek.k141_1072810                            C 0 I 18
s Ateles_geoffroyi_a.k141_1300742                             20580 33 -     58268 T----TATAGGAA--------GC-AAAATTAAC----A------GAT----ATT-T-TATC-C-------------------------------------------------------
i Ateles_geoffroyi_a.k141_1300742                         C 0 I 18
s Ateles_marginatus.k141_899112                             68574 33 +    119057 T----TATAGGAA--------GC-AAAATTAAC----A------GAT----ATT-T-TATC-C-------------------------------------------------------
i Ateles_marginatus.k141_899112                         C 0 I 18
s Ateles_paniscus.k141_1631200                              10543 33 -     25888 T----TATAGGAA--------GC-AAAATTAAC----A------GAT----ATT-T-TATC-C-------------------------------------------------------
i Ateles_paniscus.k141_1631200                          C 0 I 18
s Avahi_laniger.k141_2840928                                11605 52 -     16375 T----TATAGGAA--------GC-AAAATTAAC----A------AAT----ATA-T-TCTT-C---C---TTC-CACACC---CAC------AAA------A-------------A-C
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               5221 52 +      6337 T----TATAGGAA--------GC-AAAATTAAC----A------AAT----ATA-T-TCTT-C---C---TTC-CACACC---CAC------AAA------A-------------A-C
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26385515 49 +  51448160 T----TACAGGAA--------GC-ACAAttaac----a-aaca-t--------t-t-t----c---t---cct-caCAGC---CAC------ACA------A-------------A-C
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                       10688 49 -     13118 T----TACAGGAA--------GC-ACAATTAAC----AAACA--T--------T-T-G----C---T---CCT-CACAGC---CAC------ACA------A-------------A-C
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   50099 49 -     72089 T----CATAGGAA--------GC-AAAATTAAC----C-A-ATAT--------T-T-T----C---T---CCT-CATATC---CAC------ACA------A-------------A-C
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   305049 49 -   6870073 T----CATAGGAA--------GC-AAAATTAAC----C-A-ATAT--------T-T-T----C---T---CCT-CATATC---CAC------ACA------A-------------A-C
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22959155 49 + 161108492 T----CATAGGAA--------GC-AAAATTAAC----C-A-ATAC--------T-T-T----C---T---CCT-CATATC---CAC------ACA------A-------------A-C
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     421334 49 +    998990 T----CATAGGAA--------GC-AAAATTAAC----C-A-ATAT--------T-T-T----C---T---CCT-CATATC---CAC------ACA------A-------------A-C
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22667807 49 + 158972876 T----CATAGGAA--------GC-AAAATTAAC----C-A-ATAC--------T-T-G----C---T---CCT-CATATC---CAC------ACA------A-------------A-C
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               676645 49 +   1914593 T----CATAGGAA--------GC-AAAATTAAT----C-A-ATAT--------T-T-T----C---T---CCT-CATATC---CAC------ACA------A-------------A-C
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               118443 33 -    171031 T----TATAGGAA--------GC-AAAATTAAC----A------AAT----ATT-T-TATC-C-------------------------------------------------------
i Cacajao_ayresi.k141_724503                            C 0 I 18
s Cacajao_calvus.k141_96166                                 17463 33 +    125063 T----TATAGGAA--------GC-AAAATTAAC----A------AAT----ATT-T-TATC-C-------------------------------------------------------
i Cacajao_calvus.k141_96166                             C 0 I 18
s Cacajao_hosomi.k141_303789                                19510 33 -    216513 T----TATAGGAA--------GC-AAAATTAAC----A------AAT----ATT-T-TATC-C-------------------------------------------------------
i Cacajao_hosomi.k141_303789                            C 0 I 18
s Cacajao_melanocephalus.k141_1160263                       12053 33 -    134917 T----TATAGGAA--------GC-AAAATTAAC----A------AAT----ATT-T-TATC-C-------------------------------------------------------
i Cacajao_melanocephalus.k141_1160263                   C 0 I 18
s Camelus_bactrianus.KN276303.1                           3224629 49 -   8989139 T----TATAGGAA--------Gt-aaaattaacaaaca------t--------t-t-t----c---t---cct-catATC---CAC------ACA------A-------------A-C
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           402329 49 -  15254737 T----TATAGGAA--------Gt-aaaattaacaaaca------t--------t-t-t----c---t---cct-caCATC---CAC------ACA------A-------------A-C
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2978067 49 +   6889770 T----TATAGGAA--------gt-aaaattaacaaaca------t--------t-t-t----c---t---cct-catATC---CAC------ACA------A-------------A-C
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11527795 44 +  39901454 T----TATAGGAA--------GC-AAAATTAAC----A------T--------T-T-T----C---T---CCT-CACACT---CAC------ACA------A-------------A--
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   22769 44 +     87036 T----TATAGGAA--------GC-AAAATTAAC----A------T--------T-T-T----C---T---CCT-CACACT---CAC------ACA------A-------------A--
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11274692 44 -  35597290 T----TATAGGAa--------gc-aaaattaac----a------t--------t-t-t----c---t---cct-CACACT---CAC------ACA------A-------------A--
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11097189 44 +  39895921 T----TATAGGAa--------gc-aaaattaac----a------t--------t-t-t----c---t---cct-CACACT---CAC------ACA------A-------------A--
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16463974 44 -  44759192 T----TATAGGAa--------gc-aaaattaac----a------t--------t-t-t----c---t---cct-CACACT---CAC------ACA------A-------------A--
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21335563 49 + 157394656 T----CATAGGAA--------GC-AAAATTAAT----C-A-ATAT--------T-T-T----C---T---CCT-CATATC---CAC------ACA------A-------------A-C
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135713916 49 - 157403528 T----CATAGGAA--------GC-AAAATTAAT----C-A-ATAT--------T-T-T----C---T---CCT-CATATC---CAC------ACA------A-------------A-C
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_780116                   178 25 +      1571 T----TATA-AAA--------GC-AAAATTAAC----A------AAT-----TT----------------------------------------------------------------
i Capromys_pilorides.CapPil_scaffold_780116             C 0 I 19
s Carollia_perspicillata.CarPer_scaffold_4436               63503 28 +     67245 T----TATAAGAA--------GC-AAAATTAACCAAAA------T--------T-A--------------------------------------------------------------
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 I 19
s Castor_canadensis.CasCan_scaffold_1326                      616 25 -    202837 T----GATCAGAA--------GT-GAAATTAA-----A------CAT-----TT----------------------------------------------------------------
i Castor_canadensis.CasCan_scaffold_1326                C 0 I 52
s Catagonus_wagneri.CatWag_scaffold_1305                   164364 45 -    276539 T----TATAGGAA--------GC-AAAATTAAC----A------T--------T-T-T----C---T---CTT-TACATC---CAC------ACA------A-------------A-C
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 I 11
s Cavia_aperea.AVPZ01000278.1                            15790314 27 -  24422027 T----TGTAGNNN--------NN-NNNNNNNNN----N------NNN----NNN----------------------------------------------------------------
i Cavia_aperea.AVPZ01000278.1                           C 0 I 21
s Cavia_porcellus.DS562889.1                             15802253 27 -  24440124 T----Tgtagaaa--------gt-aaaattaat----a------aat----gtt----------------------------------------------------------------
i Cavia_porcellus.DS562889.1                            C 0 I 21
s Cavia_tschudii.CavTsc_scaffold_488                       180425 27 +    436027 T----TGTAGAAA--------GT-AAAATTAAT----A------AAT----GTT----------------------------------------------------------------
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 I 21
s Cebus_albifrons.Contig22                               18896170 33 -  29618158 T----TATAGGAA--------GC-AAAATTAAC----A------AAT----ATT-T-TATC-A-------------------------------------------------------
i Cebus_albifrons.Contig22                              C 0 I 31
s Cebus_olivaceus.k141_93739                                12820 33 -     26817 T----TATAGGAA--------GC-AAAATTAAC----A------AAT----ATT-T-TATC-A-------------------------------------------------------
i Cebus_olivaceus.k141_93739                            C 0 I 31
s Cebus_unicolor.k141_239009                                17064 33 +     25043 T----TATAGGAA--------GC-AAAATTAAC----A------AAT----ATT-T-TATC-A-------------------------------------------------------
i Cebus_unicolor.k141_239009                            C 0 I 31
s Ceratotherium_simum.JH767818.1                          4369599 21 +   7569818 T----TTTAGGAa--------gc-aaaattaac----a--------------------------------------------------------------------------------
i Ceratotherium_simum.JH767818.1                        C 0 I 24
s Cercocebus_atys.KQ010443.1                              6560011 52 +   6739814 T----TATAGGAA--------GC-AAAATTAAc----c------aat----att-t-tctc-c---c---ttc-tacAAC---TGT------ACA------C-------------C-C
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      31488 52 +     60454 T----TATAGGAA--------GC-AAAATTAAC----C------AAT----ATT-T-TCTC-C---C---TTC-TACAAC---TGT------ACA------C-------------C-C
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          6692 52 -     21101 T----TATAGGAA--------GC-AAAATTAAC----C------AAT----ATT-T-TCTC-C---C---TTC-TACAAC---TGT------ACA------C-------------C-C
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         64002 52 -    107033 T----TATAGGAA--------GC-AAAATTAAC----C------AAT----ATT-T-TCTC-C---C---TTC-TACAAC---TGT------ACA------C-------------C-C
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        6865 52 -     17608 T----TATAGGAA--------GC-AAAATTAAC----A------AAT----ATT-T-TCTC-C---C---TTC-TACAAC---TGT------ACA------C-------------C-C
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          4030 52 +     45019 T----TATAGGAA--------GC-AAAATTAAC----A------AAT----ATT-T-TCTC-C---C---TTC-TACAAC---TGT------ACA------C-------------C-C
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           4306 52 +     15177 T----TATAGGAA--------GC-AAAATTAAC----A------AAT----ATT-T-CCTC-C---C---TTC-TACAAC---TGT------ACA------A-------------C-C
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          6912 52 +     16677 T----TATAGGAA--------GC-AAAATTAAC----A------AAT----ATT-T-TCTC-C---C---TTC-TACAAC---TGT------ACA------C-------------C-C
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           29102 52 +     35983 T----TATAGGAA--------GC-AAAATTAAC----A------AAT----ATT-T-TCTC-C---C---TTC-TACAAC---TGT------ACA------C-------------C-C
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11995633 52 +  12117833 T----TATAGGAA--------GC-AAAATTAAC----A------AAT----ATT-T-TCTC-C---C---TTC-TACAAC---TGT------ACA------C-------------C-C
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46482609 52 +  46592721 T----TATAGGAA--------GC-AAAATTAAC----A------AAT----ATT-T-TCTC-C---C---TTC-TACAAC---TGT------ACA------C-------------C-C
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                        726 52 -     27215 T----TATAGGAA--------GC-AAAATTAAC----A------AAT----ATT-T-TCTC-C---C---TTC-TACAAC---TGT------ACA------C-------------C-C
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       6926 52 +     35577 T----TATAGGAA--------GC-AAAATTAAC----A------AAT----ATT-T-TCTC-C---C---TTC-TACAAC---TGT------ACA------C-------------C-C
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        6720 52 -     25661 T----TATAGGAA--------GC-AAAATTAAC----A------AAT----ATT-T-TCTC-C---C---TTC-TACAAC---TGT------ACA------C-------------C-C
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        6892 52 -     17744 T----TATAGGAA--------GC-AAAATTAAC----A------AAT----ATT-T-TCTC-C---C---TTC-TACAAC---TGT------ACA------C-------------C-C
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        26261 52 +     37128 T----TATAGGAA--------GC-AAAATTAAC----A------AAT----ATT-T-CCTC-C---C---TTC-TACAAC---TGT------ACA------A-------------C-C
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           5310 50 -      6963 T----TATAGGAA--------GC-AAAGTT-------A------AAT----ATT-T-TCTC-C---C--TCCT-TACACC---CAC------ATA------G-------------A-C
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           63821 52 -     68416 T----TATAGGAG--------GC-AAAATTAAC----A------AAC----ATT-T-TCTT-C---C---TTC-CACACC---CAC------AAA------A-------------A-C
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_133808                           12941 52 +     13308 T----TATAGGAG--------GC-AAAATTAAC----A------AAC----ATT-T-TCTT-C---C---TTC-CACACC---CAC------AAA------A-------------A-C
i Cheirogaleus_medius.k141_133808                       C 0 N 0
s Cheracebus_lucifer.k141_619653                            10106 33 -     18223 T----TATAGGAA--------GC-AAAATTAAC----A------AAT----ATT-T-TATC-C-------------------------------------------------------
i Cheracebus_lucifer.k141_619653                        C 0 I 18
s Cheracebus_lugens.k141_996499                              1844 33 +    188999 T----TATAGGAA--------GC-AAAATTAAC----A------AAT----ATT-T-TATC-C-------------------------------------------------------
i Cheracebus_lugens.k141_996499                         C 0 I 18
s Cheracebus_regulus.k141_2128895                           46143 33 +     57117 T----TATAGGAA--------GC-AAAATTAAC----A------AAT----ATT-T-TATC-C-------------------------------------------------------
i Cheracebus_regulus.k141_2128895                       C 0 I 18
s Cheracebus_torquatus.k141_315545                          50823 33 +     54541 T----TATAGGAA--------GC-AAAATTAAC----A------AAT----ATT-T-TATC-C-------------------------------------------------------
i Cheracebus_torquatus.k141_315545                      C 0 I 18
s Chinchilla_lanigera.JH721867.1                         15965009 27 +  43084221 t----tgcagaaa--------ga-aaaattagc----a------aaC----ATT----------------------------------------------------------------
i Chinchilla_lanigera.JH721867.1                        C 0 I 21
s Chiropotes_israelita.k141_1189915                         75624 33 +    196370 T----TATAGGAA--------GC-AAAATTAAC----A------AAT----ATT-T-TATC-C-------------------------------------------------------
i Chiropotes_israelita.k141_1189915                     C 0 I 18
s Chiropotes_sagulatus.k141_773804                          19805 33 +     40510 T----TATAGGAA--------GC-AAAATTAAC----A------AAT----ATT-T-TATC-C-------------------------------------------------------
i Chiropotes_sagulatus.k141_773804                      C 0 I 18
s Chlorocebus_aethiops.ctg22                             15144446 52 -  15256731 T----TAATGGAA--------GC-AAAATTAAC----A------AAT----ATT-T-TCTC-C---C---TTC-TACAAC---TGT------ACA------C-------------C-C
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      38910 52 -     53260 T----TAATGGAA--------GC-AAAATTAAC----A------AAT----ATT-T-TCTC-C---C---TTC-TACAAC---TGT------ACA------C-------------C-C
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101149469 52 + 101219884 T----TAATGGaa--------gc-aaaattaac----a------aat----att-t-tctc-c---c---ttc-tacAAC---TGT------ACA------C-------------C-C
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                19322 53 -     21363 T----AACAGGAA--------GC-AAAGTTAAC----A------AGC----ATT-T-TCTC-C---G--TTCC-CACACC---CAC------ACA------G-------------A-C
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           764626 53 +    964067 T----AACAGGAA--------GC-AAAGTTAAC----A------AGC----ATT-T-TCTC-C---G--TTCC-CACACC---CAC------ACA------G-------------A-C
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_954668              1554 57 -      1738 T----CAAAGGAA--------CC-ACAATTAAC----A------AAC----ATT-A-AATT-C---C--TTTC-TTCACC---TCCACAAAGTCT------A----------------
i Chrysochloris_asiatica.ChrAsi_scaffold_954668         C 0 I 7
s Condylura_cristata.JH655880.1                          60623631 45 +  78930452 T----TACAGAAA--------Gc-aaaatacat----a------c--------t-t-t----t---t---ccT-CATATC---TAC------ACC------A-------------A-C
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         4018 49 -      5782 T----CATAAGAA--------GC-AAAAGTCATGAACC------T--------T-T-T----C---T---GCT-CACACC---TAC------ACA------G-------------A-C
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 283589 24 -    399297 T----TATGGATT--------AT-AAAAATAA-----A--------C----ATC----------------------------------------------------------------
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 I 24
s Cricetulus_griseus.LT883672.1                          53035891 27 +  72327488 t----tacagacaaaa-----at-aaaaataa-----t--------t----atc----------------------------------------------------------------
i Cricetulus_griseus.LT883672.1                         C 0 I 24
s Crocidura_indochinensis.CroInd_scaffold_27484              3521 49 -     22648 A----TCTATAAA--------GC-A-AACTAAC----A------A--CTCT--G-T-T----C---T---TTT-CATACC---CAC------ATT------AA------------T-T
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            59005 48 -     70449 T----TATAAGAA--------GC-AAAATTAACAAACA------T--------T-T-T----C---T---CCC-CACACT---CAC------ACA------A-------------A--
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  214891 24 -    956709 T----TATAGAAA--------GT-ATA---AAC----T------CCT----ATT----------------------------------------------------------------
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 I 24
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 36560 25 -     67205 T----TGTA-AAA--------GT-AAAATTAGC----A------ATT-----TT----------------------------------------------------------------
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 I 3
s Cuniculus_paca.CunPac_flattened_line_16637                21502 27 +     26546 T----TGTAGAAA--------GT-AAAATTAAT----A------AAT----GTT----------------------------------------------------------------
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 I 21
s Dasyprocta_punctata.DasPun_flattened_line_634             62642 27 -    236241 T----TGTAGAAA--------GT-AAAATTAAT----A------AAT----GTT----------------------------------------------------------------
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 I 21
s Dasypus_novemcinctus.JH568778.1                          186356 51 -   6883506 T----TATAGGAA--------Ac-aaa-ttaac----a------agt----att-t-tctc-c---c--tttc-tgcac----CAC------ATA------G-------------A-C
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16849767 52 +  31942871 T----TACGGGAA--------GC-AAAATTAAC----A------AAC----ATT-T-TCTT-C---C---TTC-CACACC---TAC------AAA------A-------------A-C
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80042112 49 -  96802777 T----TATAGGAA--------GC-Acaattaac----a-aaca-t--------t-t-t----t---t---cct-CACAGC---CAC------ACA------A-------------A-C
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.PEHR01015603.1                            403 28 +       472 T----CATAAGAA--------GC-AAAATTAACCAACA------T--------T-A--------------------------------------------------------------
i Desmodus_rotundus.PEHR01015603.1                      C 0 n 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 327998 21 +    993696 T----TTTAGGAA--------Gc-aaaattaac----a--------------------------------------------------------------------------------
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 I 24
s Diceros_bicornis.DicBicMic_scaffold_9545                   8632 21 +    151128 T----TTTAGGAA--------GC-AAAATTAAC----A--------------------------------------------------------------------------------
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 I 24
s Dinomys_branickii.DinBra_scaffold_1996                   160486 21 +    228994 T----TGTGGAAA--------GA-AAAATTAAC----A--------------------------------------------------------------------------------
i Dinomys_branickii.DinBra_scaffold_1996                C 0 I 23
s Dipodomys_ordii.KN672545.1                              3660936 19 +   4240102 T----TATAGGAG--------GT-AAAATTAA--------------------------------------------------------------------------------------
i Dipodomys_ordii.KN672545.1                            C 0 I 35
s Dipodomys_stephensi.DipSte_scaffold_84338                  3310 19 -     11986 T----TATAGGAG--------GT-AAAATTAA--------------------------------------------------------------------------------------
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 I 35
s Dolichotis_patagonum.DolPat_scaffold_14102                41211 27 -     73477 C----TGTAGAAA--------GT-AAAATTAAT----A------AAT----GTT----------------------------------------------------------------
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 I 21
s Echinops_telfairi.JH980316.1                           23000546 53 -  44670279 T----CAgaggaa--------ac-aaaattaac----a------aat----atC-A-TCTC-A---CCAGATG-CAAATT---AAC------TCT------A----------------
i Echinops_telfairi.JH980316.1                          C 0 I 2
s Eidolon_helvum.AWHC01235761.1                              3591 49 -      8619 T----TGTAAGAA--------GC-AAAATTAACCAACA------T--------T-T-T----C---T---TCT-CATACC---CAC------ACA------G-------------A-C
i Eidolon_helvum.AWHC01235761.1                         C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1498044 49 +   1727528 T----CACAGGAA--------GT-AAAATTAAC----C-A-ATAT--------T-T-T----C---T---CCT-CATATC---CAC------ACA------A-------------A-C
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7834799 57 +  15467074 t----aagaggaa--------gt-aaaattaac----a------AAC----ATT-T-GCTC-T---C--TTTT-CACACT---TGC------ACAAAGTTTA----------------
i Elephantulus_edwardii.JH947210.1                      C 0 I 2
s Ellobius_lutescens.LOEQ01003611.1                        244634 24 -    369425 A----TGTAGGCA--------AT-AGAAATGA-----A--------C----ATC----------------------------------------------------------------
i Ellobius_lutescens.LOEQ01003611.1                     C 0 I 20
s Ellobius_talpinus.LOJH01076532.1                            978 24 +      9159 A----TGTagaca--------at-aaaaatga-----a--------c----atc----------------------------------------------------------------
i Ellobius_talpinus.LOJH01076532.1                      C 0 I 20
s Enhydra_lutris.KZ291749.1                              85878937 24 +  99434291 T----TATAGGaa--------gc-aaaattaac----a------t--------t-t--------------------------------------------------------------
i Enhydra_lutris.KZ291749.1                             C 0 I 20
s Eptesicus_fuscus.JH977687.1                             4710484 28 +   6522550 t----tataagaa--------gt-aaaatgaaCCAACA------C--------T-G--------------------------------------------------------------
i Eptesicus_fuscus.JH977687.1                           C 0 I 19
s Equus_asinus.JREZ01000062.1                             5857858 48 -   7175178 T----TTTAGGAA--------gc-aaaattaac----a--aac-a--------t-t-t----C---T---CCT-CACACC---TAC------ACA------A-------------A-C
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13356344 48 +  41866177 T----TTTAGGAA--------gc-aaaattaac----a--aac-a--------t-t-t----c---t---ccT-CACACC---TAC------ACA------A-------------A-C
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          17834 48 +     92910 T----TTTAGGAA--------gc-aaaattaac----a--aac-a--------t-t-t----c---t---ccT-CACACC---TAC------ACA------A-------------A-C
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11543013 47 +  16010500 T----TATAGGAA--------GC-AAAAGCAAT----A------G---T-T--T-T-T----T---T---CCT-CATATG---TAC------AGA------A-------------A-C
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48781479 52 -  48907691 T----TAATGGAA--------GC-AAAATTAAC----A------AAT----ATT-T-TCTC-C---C---TTC-TACAAC---TGT------ACA------C-------------C-C
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          320359 49 +    330699 T----TACAGGAA--------GC-ACAATTAAC----AAACA--T--------T-T-T----C---T---CCT-CACAGC---CAC------ACA------A-------------A-C
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             66815 49 +     89355 T----TACAGGAA--------GC-ACAATTAAC----AAACA--T--------T-T-T----C---T---CCT-CACAGC---CAC------ACA------A-------------A-C
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                              9895 52 +     13586 T----TATAGGAA--------GC-AAAATTAAC----A------AAC----ATT-T-TCTT-C---C---TTC-CACACC---CAC------AAA------A-------------A-C
i Eulemur_albifrons.k141_715837                         C 0 I 8
s Eulemur_collaris.k141_1015201                              3154 52 -      4292 T----TATAGGAA--------GC-AAAATTAAC----A------AAC----ATT-T-TCTT-C---C---TTC-CACACC---CAC------AAA------A-------------A-C
i Eulemur_collaris.k141_1015201                         C 0 I 8
s Eulemur_coronatus.k141_3240342                            16291 52 +     36558 T----TATAGGAA--------GC-AAAATTAAC----A------AAC----ATT-T-TCTT-C---C---TTC-CACACC---CAC------AAA------A-------------A-C
i Eulemur_coronatus.k141_3240342                        C 0 I 8
s Eulemur_flavifrons.k141_903901                            12613 52 +     60246 T----TATAGGAA--------GC-AAAATTAAC----A------AAC----ATT-T-TCTT-C---C---TTC-CACACC---CAC------AAA------A-------------A-C
i Eulemur_flavifrons.k141_903901                        C 0 I 8
s Eulemur_fulvus.k141_653297                                16098 52 +    109717 T----TATAGGAA--------GC-AAAATTAAC----A------AAC----ATT-T-TCTT-C---C---TTC-CACACC---CAC------AAA------A-------------A-C
i Eulemur_fulvus.k141_653297                            C 0 I 8
s Eulemur_macaco.k141_747087                                 4081 52 -     19505 T----TATAGGAA--------GC-AAAATTAAC----A------AAC----ATT-T-TCTT-C---C---TTC-CACACC---CAC------AAA------A-------------A-C
i Eulemur_macaco.k141_747087                            C 0 I 8
s Eulemur_mongoz.k141_825972                                20756 52 +     27497 T----TATAGGAA--------GC-AAAATTAAC----A------AAC----ATT-T-TCTT-C---C---TTC-CACACC---CAC------AAA------A-------------A-C
i Eulemur_mongoz.k141_825972                            C 0 I 8
s Eulemur_rubriventer.k141_411740                           23212 52 +     26808 T----TATAGGAA--------GC-AAAATTAAC----A------AAC----ATT-T-TCTT-C---C---TTC-CACACC---CAC------AAA------A-------------A-C
i Eulemur_rubriventer.k141_411740                       C 0 I 8
s Eulemur_rufus.k141_1620292                                37944 52 +     46535 T----TATAGGAA--------GC-AAAATTAAC----A------AAC----ATT-T-TTTT-C---C---TTC-CACACC---CAC------AAA------A-------------A-C
i Eulemur_rufus.k141_1620292                            C 0 I 8
s Eulemur_sanfordi.k141_186399                              20685 52 -     29447 T----TATAGGAA--------GC-AAAATTAAC----A------AAC----ATT-T-TCTT-C---C---TTC-CACACC---CAC------AAA------A-------------A-C
i Eulemur_sanfordi.k141_186399                          C 0 I 8
s Felis_catus.AANG03202589.1                                  460 48 -       609 T----TATAGGAA--------GC-AAAattagcaaaca------t--------t-t-t----c---t---ccc-cacACT---CAC------ACA------A-------------A--
i Felis_catus.AANG03202589.1                            C 0 I 58
s Felis_catus_fca126.CM031420.1                         129287389 48 - 158578461 T----TATAGGAA--------GC-AAAattagcaaaca------t--------t-t-t----c---t---ccc-cacACT---CAC------ACA------A-------------A--
i Felis_catus_fca126.CM031420.1                         C 0 I 15
s Felis_nigripes.FelNig_flattened_line_8080                 28492 48 +     52776 T----TATAGGAA--------GC-AAAATTAGCAAACA------T--------T-T-T----C---T---CCC-CACACT---CAC------ACA------A-------------A--
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13896783 27 -  19261668 C----TGcagaaa--------gt-aaaattatc----a------aac----att----------------------------------------------------------------
i Fukomys_damarensis.KN123630.1                         C 0 I 24
s Galago_moholi.ctg555                                     215934 53 -    847004 T----TATCGGAA--------GCAAAAATCAAC----A------AAC----ATT-T-TCTT-C---T---TGC-CACACC---TAC------AAA------A-------------A-C
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           18295 53 -     43889 T----TATAGGAA--------GCAAAAATCAAC----A------AAC----ATT-T-TCTT-C---T---TGC-CACACC---TAC------AAA------A-------------A-C
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          15439 51 +     27357 T----TATAGGAA--------GC-AAAATCAAC----A------AAC----ATT-T-TCTT-C---T---TTC-CACACC----AA------AAA------A-------------A-C
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               160211 52 +    324696 T----TTTAGGAG--------AC-AAAATTAAT----A------AAC----ATT-T-TGTT-C---C---TTC-CACACC---CAC------ACA------A-------------G-C
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    187824 49 -    189561 T----CATAGGAA--------GC-AAAATTAAC----C-A-ATAT--------T-T-T----C---T---CCT-CATATC---CAC------ACA------A-------------A-C
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           17108 26 -     18683 T----GATAGGCA--------GT-AAAATTAAC----A------CAT-----TT----------------------------------------------------------------
i Glis_glis.GliGli_scaffold_79770                       C 0 I 24
s Gorilla_beringei.k141_111300                               9895 52 -     14630 T----TATAGGAA--------GC-AAAATTAAC----A------AAT----ATT-T-TCTC-C---C---TTC-TACAAC---TGT------ACA------C-------------C-C
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119656995 52 - 195582420 T----TATAGGaa--------gc-aaaattaac----a------aat----att-t-tctc-c---c---ttc-taCAAC---TGT------ACA------C-------------C-C
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   80423 26 +    118900 T----GACAGGCA--------GT-AAAATTAAC----A------CAT-----TT----------------------------------------------------------------
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 I 23
s Hapalemur_alaotrensis.k141_1280836                         6684 52 +     10286 T----TATATGAA--------GC-AAAATTAAC----A------AAC----ATT-T-TCTT-T---C---TTC-CACACC---CAC------AAA------A-------------A-C
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             5162 52 -     11661 T----TATATGAA--------GC-AAAATTAAC----A------AAC----ATT-T-TCTT-T---C---TTC-CACACC---CAC------AAA------A-------------A-C
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                            10489 52 +     56096 T----TATATGAA--------GC-AAAATTAAC----A------AAC----ATT-T-TCTT-T---C---TTC-CACACC---CAC------AAA------A-------------A-C
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        33738 52 -     42470 T----TATATGAA--------GC-AAAATTAAC----A------AAC----ATT-T-TCTT-T---C---TTC-CACACC---CAC------AAA------A-------------A-C
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        50361 52 -     54384 T----TATATGAA--------GC-AAAATTAAC----A------AAC----ATT-T-TCTT-T---C---TTC-CACACC---CAC------AAA------A-------------A-C
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              24122 49 +     53719 T----TATAAGAA--------GC-AAAATTAACAAACA------T--------TTT-T----C---T---CCC-CACATT---CAC------ACA------A-------------A--
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                34954 49 -     91191 T----CATAGGAA--------GC-AAAATTAAC----C-A-ATAT--------T-T-T----C---T---CCT-CATATC---CAC------ACA------A-------------A-C
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2561280 27 +  31725842 T----TGTAGAAA--------GT-AAAATTATC----C------AAC----ACT----------------------------------------------------------------
i Heterocephalus_glaber.JH602058.1                      C 0 I 24
s Heterohyrax_brucei.HetBruBak_scaffold_25354               63508 53 +     73687 T----TAGAGGAA--------GT-GAAATTAAC----A------TAC----GTT-T-TCTG-T---C--TTCC-CACACG---CAC------ACA------A-------------A-C
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              152166 50 +    277961 T----TACAGGAA--------GC-AAAATTAAC----AAACA--T--------TTT-T----C---T---CCT-CACATC---CAC------ACA------A-------------A-C
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      285193 62 -    477199 t----cataagaa--------ac-aaaattaaccaACA------G--------t-t-t----c---t---ccc-cacacc---cac------aca------aACCATAAGGAGAAA-C
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959               2879 62 +     26078 T----CATAAGAA--------AC-AAAATTAACCAACA------T--------T-T-T----C---T---CCC-CACACC---CAC------ACA------AACCATAAGGAGAAA-C
i Hipposideros_galeritus.HipGal_scaffold_52959          C 0 C 0
s Hoolock_leuconedys.ctg649                                   109549 52 +    115816 T----TATAGGAA--------GC-AAAATGAAC----A------AAT----ATT-T-TCTC-C---C---TTC-TACAAC---TGT------ACA------C-------------C-C
i Hoolock_leuconedys.ctg649                                I 282 I 126
s Hyaena_hyaena.HyaHya_flattened_line_20729                 24562 48 -     67322 T----TATAAGAA--------GC-AAAATTAACAAACA------T--------A-T-T----C---T---CCC-CACACT---CAC------ACA------A-------------A--
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           21878 27 -    119109 T----TGTAGAAA--------GT-AAAATTAAT----A------AAT----GTT----------------------------------------------------------------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 I 21
s Hylobates_abbotti.k141_1816750                             2377 52 +      3202 T----TATAGGAA--------GC-AAAATGAAC----A------AAT----ATT-T-TCTC-C---C---TTC-TACAAC---TGT------ACA------C-------------C-C
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1136966                               386 52 +      9785 T----TATAGGAA--------GC-AAAATGAAC----C------AAT----ATT-T-TCTC-C---C---TTC-TACAAC---TGT------ACA------C-------------C-C
i Hylobates_agilis.k141_1136966                         C 0 C 0
s Hylobates_klossii.k141_468230                              3866 52 +      5464 T----TATAGGAA--------GC-AAAATGAAC----A------AAT----ATT-T-TCTC-C---C---TTC-TACAAC---TGT------ACA------C-------------C-C
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14629212 52 -  25970782 T----TATAGGAA--------GC-AAAATGAAC----A------AAT----ATT-T-TCTC-C---C---TTC-TACAAC---TGT------GCA------C-------------C-C
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            1764 52 +      4161 T----TATAGGAA--------GC-AAAATGAAC----A------AAT----ATT-T-TCTC-C---C---TTC-TACAAC---TGT------ACA------C-------------C-C
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                    10199 24 +     22540 ---------------------------------------------------------TCTC-T---C---CTC-TGCACT---TAC------CCA------G-------------T-C
i Hystrix_cristata.HysCri_scaffold_50788                I 27 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7131033 24 +  13083262 ---------------------------------------------------------tctc-c---c---CTC-GACACC---CAC------GCA------A-------------T-C
i Ictidomys_tridecemlineatus.JH393315.1                 I 24 I 15
s Indri_indri.k141_2197838                                   2223 52 +      3484 T----TATAGGAA--------GC-AAAATTAAC----A------AAC----ATT-T-TCTT-C---C---TTC-CACACC---CAC------AAA------A-------------A-C
i Indri_indri.k141_2197838                              C 0 I 14
s Inia_geoffrensis.IniGeo_flattened_line_66725              14361 24 +     17520 --------------------------------------------T--------T-T-T----C---T---CCT-CACAGC---CAC------ACA------A-------------A-C
i Inia_geoffrensis.IniGeo_flattened_line_66725          I 22 C 0
s Jaculus_jaculus.JH725517.1                              8579798 28 +  11848649 TTAGTTACACAGA--------GC-AAAATCAA-----A--------T----ATT----------------------------------------------------------------
i Jaculus_jaculus.JH725517.1                            C 0 I 25
s Kogia_breviceps.KogBre_flattened_line_35920               28972 37 +     37189 -------------------------CAATTAAC----AAACA--T--------T-T-T----C---T---CCT-CACAGC---CAC------ACA------A-------------A-C
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          54664 33 -    147782 T----TATAGGAA--------GC-AAAATTAAC----A------GAT----ATT-T-TATC-C-------------------------------------------------------
i Lagothrix_lagothricha.k141_12968                      C 0 I 18
s Lasiurus_borealis.LasBor_scaffold_59542                    7051 28 +     26176 T----TGTAAGAA--------AT-AAAATGAACCAACA------C--------T-A--------------------------------------------------------------
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 I 19
s Lemur_catta.scaffold_1                                258412039 52 - 285822530 T----TATATGAA--------GC-AAAATTAAC----A------AAC----ATT-T-TCTT-C---C---TTC-CACACC---CAC------AAA------A-------------A-C
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        29361 52 +     39228 T----TATAGGAG--------GC-AAAATTAAC----A------AAC----ATT-T-TCTT-C---C---TTC-CACACC---CAC------AAA------A-------------A-C
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            58725 52 +     63517 T----TATAGGAG--------GC-AAAATTAAC----A------AAC----ATT-T-TCTT-C---C---TTC-CACACC---CAC------AAA------A-------------A-C
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        37105 52 -     38897 T----TATAGGAG--------GC-AAAATTAAC----A------AAC----ATT-T-TCTT-C---C---TTC-CACACC---CAC------AAA------A-------------A-C
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      3151 52 -     13103 T----TATAGGAG--------GC-AAAATTAAC----A------AAC----ATT-T-TCTT-C---C---TTC-CACACC---CAC------AAA------A-------------A-C
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3092883 41 -   3498232 T----TATAAGaa--------gg-aaaattaac----a------t--------ttt-t----c---t---cct-CACA-------C------ACA------A-------------G--
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    21633 52 +     22452 T----TATAGGAA--------GT-AAAATGAGC----A------AAC----ATT-T-TCTC-T---C---TTC-CACAGC---CAT------AAA------G-------------T-C
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            141279 49 +   3060487 T----TACAGGAA--------GC-ACAATtaac----a-aaca-t--------t-t-t----c---t---cct-cACAGC---CAC------ACA------A-------------A-C
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19253100 52 +  19376315 T----TATAGGAA--------GC-AAAATTAAC----A------AAT----ATT-T-TCTC-C---C---TTC-TACAAC---TGT------ACA------C-------------C-C
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           15897 53 +     84689 T----TATAGGAA--------ACAAAAATCAAC----A------AAC----ATT-T-TCTT-C---T---TTC-CACACC---TAC------AAA------A-------------A-C
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3783635 53 +   6799190 T----TATAGGAA--------ACAAAAATCAAC----A------AAC----ATT-T-TCTT-C---T---TTC-CACACC---TAC------AAA------A-------------A-C
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20599433 31 -  62548349 G----TAGAGGAA--------CC-AAAATTAAc----a------aac----att-t-tct----------------------------------------------------------
i Loxodonta_africana.GL010040.1                         C 0 I 20
s Lycaon_pictus.CM007556.1                               11096645 44 +  39895028 T----TATAGGAa--------gc-aaaattaac----a------t--------t-t-t----c---t---cct-CACACT---CAC------ACA------A-------------A--
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             24851 50 +     74745 T----TATAGGAA--------GC-AAAATTAAC----A------AAT----ATT-T-TCTC-C---C-----C-TACAAC---CGT------ACA------C-------------C-C
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12711312 52 +  12821369 T----TATAGGAA--------GC-AAAATTAAC----A------AAT----ATT-T-TCTC-C---C---TTC-TACAAC---TGT------ACA------C-------------C-C
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                3885 52 -     26467 T----TATAGGAA--------GC-AAAATTAAC----A------AAT----ATG-T-TCTC-C---C---TTC-TACAAC---TGT------ACA------C-------------C-C
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           51756 52 +     63263 T----TATAGGAA--------GC-AAAATTAAC----A------AAT----ATG-T-TCTC-C---C---TTC-TACAAC---CGT------ACA------C-------------C-C
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 3866 52 -     26361 T----TATAGGAA--------GC-AAAATTAAC----A------AAT----ATG-T-TCTC-C---C---TTC-TACAAC---TGT------ACA------C-------------C-C
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 7056 52 -      7381 T----TATAGGAA--------GC-AAAATTAAC----A------AAT----ATT-T-TCTC-C---C---TTC-TACAAC---TGT------ACA------C-------------C-C
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  50285 52 -     79256 T----TATAGGAA--------GC-AAAATTAAC----A------AAT----ATT-T-TCTC-C---C---TTC-TACAAC---TGT------ACA------C-------------C-C
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196040383 52 + 196197964 T----TATAGGaa--------gc-aaaattaac----a------aat----atg-t-tCTC-C---C---TTC-TACAAC---TGT------ACA------C-------------C-C
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11450553 52 +  11645122 T----TATAGGaa--------gc-aaaattaac----a------aat----att-t-tctc-c---c---ttc-tacAAC---TGT------ACA------C-------------C-C
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   9239 52 -     46448 T----TATAGGAA--------GC-AAAATTAAC----A------AAT----ATT-T-TCTC-C---C---TTC-TACAAC---TGT------ACA------C-------------C-C
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                6902 50 -     13212 T----TATAGGAA--------GC-AAAATTAAC----A------AAT----ATT-T-TCTC-C---C-----C-TACAAC---CGT------ACA------C-------------C-C
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 20582 52 -     55006 T----TATAGGAA--------GC-AAAATTAAC----A------AAT----ATT-T-TCTC-C---C---TTC-TACAAC---TGT------ACA------C-------------C-C
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43845697 52 +  43892939 T----TATAGGAA--------GC-AAAATTAAC----A------AAT----ATT-T-TCTC-C---C---TTC-TACAAC---TGT------ACA------C-------------C-C
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               21866 52 -     24607 T----TATAGGAA--------GC-AAAATTAAC----A------AAT----ATT-T-TCTC-C---C---TTC-TACAAC---TGT------ACA------C-------------C-C
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               9236 52 -     27140 T----TATAGGAA--------GC-AAAATTAAC----A------AAT----ATT-T-TCTC-C---C---TTC-TACAAC---TGT------ACA------C-------------C-C
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                703356 49 +    802869 T----TATAAGAA--------GC-AAAATTAACCAGCA------T--------T-T-C----C---T---CCT-CACACC---CAT------ACA------A-------------A-C
i Macroglossus_sobrinus.MacSob_scaffold_879             I 5 C 0
s Mandrillus_leucophaeus.scaffold125                     43442272 52 -  43563597 T----TATAGGAA--------GC-AAAATTAAC----A------AAT----ATT-T-TCTC-C---C---TTC-TACGAC---TGT------ACA------C-------------C-C
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4455076 51 -   4543643 T----TATAGGAA--------GC-AAAATTAAC----A------A-T----ATT-T-TCTC-C---C---TTC-TACGAC---TGT------ACA------C-------------C-C
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            153641 50 +    252755 T----TATAGGAA--------GG-AAAATTAAC----AGACAT-T--------T-T-T----C---T---CCT-TATACT---CAC------ACA------A-------------A-C
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             41239 50 +     58827 T----TATAGGAA--------GG-AAAATTAAC----GAACAT-T--------T-T-T----C---T---CCT-TACACT---CAC------ACA------A-------------A-C
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36878900 24 +  64221397 ---------------------------------------------------------tctc-c---C---CTC-GACACC---CAC------ACA------A-------------T-C
i Marmota_marmota.CZRN01000005.1                        I 24 I 15
s Megaderma_lyra.MegLyr_scaffold_3562                       67133 49 -    234502 T----TATAAGAA--------GT-AAAGTTAACCAACA------T--------T-G-T----C---T---CCT-CACACC---CAC------ACA------A-------------G-C
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             8031 43 -     87323 T----TCTAGGAA--------GC-AAAATTAAC----A------T--------T-T-T----C---T---CC--CACACT---CAC------ACA------G-------------A--
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 2867 20 +    115071 T----TGTAGACA--------AT-AAAAATAC-----A--------------------------------------------------------------------------------
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 I 20
s Mesocricetus_auratus.KB708139.1                         1052454 32 -  26018355 t----tacagacaaaaataaaat-aaaaataa-----a--------t----atc----------------------------------------------------------------
i Mesocricetus_auratus.KB708139.1                       C 0 I 23
s Mesoplodon_bidens.MesBid_scaffold_96348                    3930 49 -     12939 T----TATAGGAA--------GC-ACAATTAAC----AAACA--T--------T-T-T----C---T---TCT-CACAGC---CAC------ACA------A-------------A-C
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16515086 52 +  47401472 T----TATAGGAG--------GC-AAAATtaac----a------aac----att-t-tctt-c---c---ttc-cacaCC---CAC------AAA------A-------------A-C
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  42116 53 -     48017 T----CAGAGGAA--------AC-AAAATTAGA----A------AAT----ATC-A-TCTG-T---CCAGATG-CAAATT---AAC------TCT------A----------------
i Microgale_talazaci.MicTal_scaffold_34660              C 0 I 2
s Micronycteris_hirsuta.MicHir_scaffold_37978               26457 28 -     32043 T----CATAAGAT--------GG-AAAATTAACCAACA------T--------T-A--------------------------------------------------------------
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 I 19
s Microtus_ochrogaster.CM001673.1                        22825459 24 -  98408828 A----tgtagaca--------at-aaaaataa-----a--------c----atc----------------------------------------------------------------
i Microtus_ochrogaster.CM001673.1                       C 0 I 20
s Miniopterus_natalensis.LDJU01000022.1                   8214805 28 +  10048721 t----tataAGAA--------GC-AAAATTAACCAACA------T--------T-T--------------------------------------------------------------
i Miniopterus_natalensis.LDJU01000022.1                 I 178 I 19
s Miniopterus_schreibersii.MinSch_scaffold_24116            39263 28 +     45743 T----TATAAGAA--------GC-AAAATTAACCAACA------T--------T-T--------------------------------------------------------------
i Miniopterus_schreibersii.MinSch_scaffold_24116        I 178 I 19
s Miopithecus_ogouensis.k141_2935907                         6818 52 +     29742 T----TATAGGAA--------GC-AAAATTAAC----A------AAC----ATT-T-TCTC-C---C---TTC-TACAAC---TGT------ACA------C-------------C-C
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        18379 41 -    104932 T----TATAAGAA--------GG-AAAATTAAC----A------T--------TTT-T----C---T---CCT-CACA-------C------ACA------A-------------G--
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     5769 53 -     12809 T----TATAGGAA--------GC-AAAATTAAC----A------AAC----ATT-T-TCTT-C---C---TTC-CACACC---CAC------AAA------A-------------ATC
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 151705 49 +    154973 T----TATAGGAA--------GC-ACAATTAAC----AAACA--T--------T-T-T----T---T---CCT-CACAGC---CAC------ACA------A-------------A-C
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                164973 28 +    265003 T----TATAAGAA--------GC-AAAATTAACCAACA------T--------C-A--------------------------------------------------------------
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 I 19
s Moschus_moschiferus.MosMos_scaffold_78805                  8503 49 -     19904 T----CATAGGAA--------GC-AAAATTAAC----C-A-ATAT--------T-G-T----T---T---CCT-CATATC---CAC------ACA------A-------------A-C
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  151861 49 -    168139 T----TATAAGAA--------GC-AAAATTAACAAACA------T--------TTT-T----C---T---CCC-CACATT---CAC------ACA------A-------------A--
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          25793 28 -    100666 T----TATAGGAA--------GT-AAAATGAACCAACA------T--------T-A--------------------------------------------------------------
i Murina_feae.MurFea_scaffold_2254                      C 0 I 19
s Mus_caroli.LT608236.1                                  70772698 20 +  92629107 T----TGTAGACA--------AT-GAAAATAA-----A--------------------------------------------------------------------------------
i Mus_caroli.LT608236.1                                 C 0 I 25
s Mus_musculus.chr16                                     75494750 20 +  98207768 T----Tgtagaca--------at-aaaaataa-----a--------------------------------------------------------------------------------
i Mus_musculus.chr16                                    C 0 I 25
s Mus_pahari.LT608305.1                                  67561502 20 +  89017189 T----Tgtagaca--------at-aaaaataa-----a--------------------------------------------------------------------------------
i Mus_pahari.LT608305.1                                 C 0 I 25
s Mus_spretus.CM004110.1                                 74337473 20 +  97876770 T----Tgtagaca--------at-aaaaataa-----a--------------------------------------------------------------------------------
i Mus_spretus.CM004110.1                                C 0 I 25
s Muscardinus_avellanarius.MusAve_scaffold_9643             15515 26 +     98495 T----GATAGGCA--------GT-AAAATTAAT----A------CAT-----TT----------------------------------------------------------------
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 I 24
s Mustela_putorius.JH417978.1                             4430138 24 -  28371801 T----TATAGGaa--------gc-aaaattaac----a------t--------t-t--------------------------------------------------------------
i Mustela_putorius.JH417978.1                           C 0 I 17
s Myocastor_coypus.MyoCoy_scaffold_3653                     96281 25 -    117718 T----TATA-TAA--------GT-AAAGTTAGC----A------AAG-----TT----------------------------------------------------------------
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 I 19
s Myotis_brandtii.KE161952.1                               972807 28 +   8389877 T----TATAAGAA--------GT-AAAATGAACCAACA------T--------T-A--------------------------------------------------------------
i Myotis_brandtii.KE161952.1                            C 0 I 17
s Myotis_davidii.KB114863.1                               5023883 28 +   6462685 T----TATAAGAA--------GT-AAAATGAACCAACA------T--------T-A--------------------------------------------------------------
i Myotis_davidii.KB114863.1                             C 0 I 19
s Myotis_lucifugus.GL429887.1                             3470312 28 -   3747815 T----TATAAGAA--------GT-AAAATGAACCAACA------T--------T-A--------------------------------------------------------------
i Myotis_lucifugus.GL429887.1                           C 0 I 19
s Myotis_myotis.MyoMyo_scaffold_6123                        15545 24 +     66751 T----TATAAGAA--------GT-AAAATGA---A-CA------T--------T-A--------------------------------------------------------------
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 I 19
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             8296 51 -      8794 T----TTTAGGAA--------GG-AAA----AA----A------GGT----ATT-T-TCTC-C---T--TTC--CACACCCCACAC------ACA------G-------------A-C
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            125197 24 +    362372 G----TTTAGGCA--------GT-AAAAGTAA-----A--------C----ATC----------------------------------------------------------------
i Nannospalax_galili.KL201303.1                         C 0 I 33
s Neomonachus_schauinslandi.NINY01007774.1                4491774 39 -  14209539 T----TATAAGaa--------gg-aaaattaac----a------t--------ttt-t----c---t---ccT-CACA-------C------aca-----------------------
i Neomonachus_schauinslandi.NINY01007774.1              C 0 I 2
s Neophocaena_asiaeorientalis.KZ688543.1                  3956296 49 -   4490290 T----TACAGGAA--------GC-Acaattaac----a-aaca-t--------t-t-t----t---t---cct-CACAGC---CAC------ACA------A-------------A-C
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  52287 28 +     94413 T----TATAGGAA--------GC-AAAATTAAGCACCA------T--------T-A--------------------------------------------------------------
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 I 19
s Nomascus_annamensis.k141_762468                             883 52 -      2755 T----TATAGGAA--------GC-AAAATGAAC----A------AAT----ATT-T-TTTC-C---C---TTC-TACAAC---TGT------ACA------C-------------C-C
i Nomascus_annamensis.k141_762468                       C 0 C 0
s Nomascus_concolor.k141_256540                              7495 52 -      8966 T----TATAAGAA--------GC-AAAATGAAC----A------AAT----ATT-T-TCTC-C---C---TTC-TACAAC---TGT------GCA------C-------------C-C
i Nomascus_concolor.k141_256540                         C 0 C 0
s Nomascus_gabriellae.k141_1400361                           1434 52 -      2203 T----TACAGGAA--------GC-AAAATGAAC----A------AAT----ATT-T-TCTC-C---C---TTC-TACAAC---TGT------ACA------C-------------C-C
i Nomascus_gabriellae.k141_1400361                      C 0 I 35
s Nomascus_siki_b.tarseq_453                             6746 52 +     12787 T----TATAGGAA--------GC-AAAATGAAC----A------AAT----ATT-T-TCTC-C---C---TTC-TACAAC---TGT------ACA------C-------------C-C
i Nomascus_siki_b.tarseq_453                        C 0 I 65
s Nomascus_siki_a.k141_421408                                  1348 52 +     16235 T----TATAGGAA--------GC-AAAATGAAC----A------AAT----ATT-T-TCTA-C---C---TTC-TACAAC---TGT------ACA------C-------------C-C
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                39514 45 +   3668941 T----TATAGGaa--------gc-aaaattaac----a------t--------t-t-t---tc---t---ccT-CATACT---CAC------ACA------A-------------A--
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65572669 52 -  95554990 t----tacaGGAA--------AC-AAAATCAAT----A------AAC----GTT-T-TCTT-C---T---TTC-CACACC---TAC------AAA------A-------------A-C
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_6040852                             306 52 +      1868 t----TACAGGAA--------AC-AAAATCAAT----A------AAC----GTT-T-TCTT-C---T---TTC-CACACC---TAC------AAA------A-------------A-C
i Nycticebus_coucang.k141_6040852                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65680854 52 +  89412551 t----tataggaa--------ac-aaaatcaat----a------aac----att-t-tctt-c---t---ttc-cacacc---tac------aAA------A-------------A-C
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            5000727 34 -  23139505 T----TATAGGAT--------AT-AAAATGTGC----G------AAC----ACT-T-TCTA-A---C---------------------------------------------------
i Ochotona_princeps.JH802095.1                          C 0 I 21
s Octodon_degus.JH651621.1                                3691618 25 +  10294119 T----Cgta-aaa--------gt-aaaattaac----a------aat-----tt----------------------------------------------------------------
i Octodon_degus.JH651621.1                              C 0 I 21
s Odobenus_rosmarus.KB229369.1                             686472 41 -   3126709 T----TATAGgaa--------gg-aaaattaac----a------t--------ttt-t----c---t---cct-CACA-------C------ACA------A-------------G--
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1085482 48 +   1425656 T----CACAGGAA--------GT-AA-ATTAAC----C-A-ATAT--------T-T-T----C---T---CCT-TATATC---CAC------ACA------C-------------A-C
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         43547 49 +     78940 T----CATAGGAA--------GC-AAAATTAAC----C-A-ATAT--------T-T-T----C---T---CCT-CATATC---CAC------ACA------A-------------A-C
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  131261 24 +    145789 A----TGTAGACA--------AT-AAAAATAA-----A--------C----ATC----------------------------------------------------------------
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 I 24
s Onychomys_torridus.OnyTor_scaffold_12578                  44177 24 +     62360 A----TATAGATA--------AT-AAAAATAA-----A--------T----ACC----------------------------------------------------------------
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 I 24
s Orcinus_orca.KB316965.1                                 7229977 49 -   7562323 T----TATAGGAA--------GC-Acaattaac----a-aaca-t--------t-t-t----t---t---ccT-CACAGC---CAC------ATA------A-------------A-C
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              64830 51 -     66828 T----TAGAGGAA--------GC-AAAATTAAC----A------AAC----ATT-T-TCTC-A---C--TTTC-CACACC---CAC------ACA------A----------------
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 I 2
s Oryctolagus_cuniculus.CM000803.1                      141884649 52 + 163896628 T----TATAGGAA--------GT-AAAATGAgc----a------aac----att-t-tctc-t---c---ttc-caCAGC---CAC------AAA------G-------------T-C
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      316652 44 -    505867 T----TATAGGAa--------gc-aaaattaac----a------t--------t-t-t----c---t---cct-CACGCT---CAC------ACA------A-------------A--
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        5796 53 -     53940 T----TATAGGAA--------GCAAAAATCAAC----A------AAC----ATT-T-TCTT-C---T---TTC-CGCATC---TAC------AAA------A-------------A-C
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18013765 53 -  38779656 T----TATAGGAA--------Gcaaaaatcaac----a------aac----att-t-tctt-c---t---ttc-cacatc---TAC------AAA------A-------------A-C
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134084739 49 - 275406953 T----CACAGGAA--------GC-AAAATTAAC----C-A-ATAT--------T-T-T----C---T---CCT-CATATC---CAC------ACA------A-------------A-C
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      85977 49 +    140051 T----CATAGGAA--------GC-AAAATTAAT----C-A-ATAT--------T-T-T----C---T---CCT-CATATC---CAC------ACA------A-------------A-C
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127579174 52 - 205426864 T----TATAAGaa--------gc-aaaattaac----a------aat----att-t-tctc-c---c---ttt-tacaAC---TGT------ACA------C-------------C-C
i Pan_paniscus.CM003386.1                               I 3 I 65
s Pan_troglodytes.CM009241.2                            120156334 52 - 196562556 T----TATAAGaa--------gc-aaaattaac----a------aat----att-t-tctc-c---c---ttt-tacaAC---TGT------ACA------C-------------C-C
i Pan_troglodytes.CM009241.2                            I 3 I 65
s Panthera_onca.PanOnc_flattened_line_1615                  41414 48 +    295523 T----TATAGGAA--------GC-AAAATTAGCAAACA------T--------T-T-T----C---T---CCC-CACACT---CAC------ACA------A-------------A--
i Panthera_onca.PanOnc_flattened_line_1615              C 0 I 10
s Panthera_pardus.KV860323.1                              3645230 48 +  18214204 T----TATAGGAA--------GC-AAAattagcaaaca------t--------t-t-t----c---t---ccc-cacACT---CAC------ACA------A-------------A--
i Panthera_pardus.KV860323.1                            C 0 I 10
s Panthera_tigris.KE721879.1                              5034871 48 -   6340057 T----TATATGAA--------GC-AAAattagcaaaca------t--------t-t-t----c---t---ccc-cacACT---CAC------ACA------A-------------A--
i Panthera_tigris.KE721879.1                            C 0 I 8
s Pantholops_hodgsonii.KE114631.1                         1073609 49 -   1292953 T----CATAGGAA--------GC-AAAATTAAC----C-A-ATAT--------T-T-T----C---T---TCT-CATATC---CAC------ACA------A-------------A-C
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188161061 52 - 188283584 T----TATAGGaa--------gc-aaaattaac----a------aat----att-t-tctc-c---c---ttc-tacAAC---TGT------ACA------C-------------C-C
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              4151 52 +     25005 T----TATAGGAA--------GC-AAAATTAAC----A------AAT----ATT-T-TCTC-C---C---TTG-TACAAC---TGT------ACA------C-------------C-C
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47518433 52 +  47705337 T----TATAGGAA--------GC-AAAATTAAC----A------AAT----ATT-T-TCTC-C---C---TTC-TACAAC---TGT------ACA------C-------------C-C
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 72424 52 -    104429 T----TATAGGAA--------GC-AAAATTAAC----A------AAT----ATT-T-TCTC-C---C---TTC-TACAAC---TGT------ACA------C-------------C-C
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   10956 52 +     14967 T----TATAGGAA--------GC-AAAATTAAC----A------AAT----ATT-T-TCTC-C---C---TTC-TACAAC---TGT------ACA------C-------------C-C
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 6821 52 -      7628 T----TATAGGAA--------GC-AAAATTAAC----A------AAT----ATT-T-TCTC-C---C---TTC-TACAAC---TGT------ACA------C-------------C-C
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    122884 48 -    135482 T----TATAAGAA--------GC-AAAATTAACAAACA------T--------T-T-T----C---T---CCC-CGCACT---CAC------ACA------A-------------A--
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          11460 52 -     23713 T----TATAGGAA--------GCAAAA-TCAAC----A------AAC----ATT-T-TCTT-C---T---TTC-CACACC---TAC------AAA------A-------------A-C
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           12611 52 +     61070 T----TATAGGAA--------GCAAAA-TCAAC----A------AAC----ATT-T-TCTT-C---T---TTC-CACACC---TAC------AAA------A-------------A-C
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Peromyscus_maniculatus.KI615458.1                       2840068 24 -   3366660 ---------------------------------------------------------ttCT-C---T---ATC-CACACC---CAG------ACA------G-------------T-C
i Peromyscus_maniculatus.KI615458.1                     I 24 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       2931 19 +     49596 T----TATAGGAG--------GT-AAAATTAA--------------------------------------------------------------------------------------
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 I 35
s Petromus_typicus.PetTyp_scaffold_33007                    17621 27 -     36578 T----TGTAGAAA--------GT-AAAATTACC----A------ACT----ATT----------------------------------------------------------------
i Petromus_typicus.PetTyp_scaffold_33007                C 0 I 24
s Phocoena_phocoena.PhoPho_flattened_line_53071              4437 28 +      8220 T----TACAGGAA--------GC-ACAATTAAC----AAACA--T--------T-T--------------------------------------------------------------
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 I 21
s Pipistrellus_pipistrellus.PipPip_scaffold_3306           101063 28 +    112873 T----TATAAAAA--------GT-AAAATGAACCAACA------C--------T-G--------------------------------------------------------------
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 I 19
s Platanista_gangetica.PlaMin_flattened_line_72990          10919 30 +     21690 T----TATAGGAA--------GC-ACAATTAAC----AAACA--C--------T-T-T----C-------------------------------------------------------
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 I 19
s Plecturocebus_bernhardi.k141_959214                       26755 33 +     44506 T----TATAGGAA--------GC-AAAATTAAC----A------AAT----ATT-T-TATC-C-------------------------------------------------------
i Plecturocebus_bernhardi.k141_959214                   C 0 I 18
s Plecturocebus_brunneus.k141_498086                        26968 33 +     67491 T----TATAGGAA--------GC-AAAATTAAC----A------AAT----ATT-T-TATC-C-------------------------------------------------------
i Plecturocebus_brunneus.k141_498086                    C 0 I 18
s Plecturocebus_caligatus.k141_2539816                      17207 33 -     98129 T----TATAGGAA--------GC-AAAATTAAC----A------AAT----ATT-T-TATC-C-------------------------------------------------------
i Plecturocebus_caligatus.k141_2539816                  C 0 I 18
s Plecturocebus_cinerascens.k141_744510                     26808 33 +    147771 T----TATAGGAA--------GC-AAAATTAAC----A------AAT----ATT-T-TATC-C-------------------------------------------------------
i Plecturocebus_cinerascens.k141_744510                 C 0 I 18
s Plecturocebus_cupreus.k141_1145860                         3443 33 -     43940 T----TATAGGAA--------GC-AAAATTAAC----A------AAT----ATT-T-TATC-C-------------------------------------------------------
i Plecturocebus_cupreus.k141_1145860                    C 0 I 18
s Plecturocebus_dubius.k141_3565563                          7526 33 -     55515 T----TATAGGAA--------GC-AAAATTAAC----A------AAT----ATT-T-TATC-C-------------------------------------------------------
i Plecturocebus_dubius.k141_3565563                     C 0 I 18
s Plecturocebus_grovesi.k141_242819                         26880 33 +    152463 T----TATAGGAA--------GC-AAAATTAAC----A------AAT----ATT-T-TATC-C-------------------------------------------------------
i Plecturocebus_grovesi.k141_242819                     C 0 I 18
s Plecturocebus_hoffmannsi.k141_985533                       4688 33 -    119457 T----TATAGGAA--------GC-AAAATTAAC----A------AAT----ATT-T-TATC-C-------------------------------------------------------
i Plecturocebus_hoffmannsi.k141_985533                  C 0 I 18
s Plecturocebus_miltoni.k141_841561                         16602 33 +    134592 T----TATAGGAA--------GC-AAAATTAAC----A------AAT----ATT-T-TATC-C-------------------------------------------------------
i Plecturocebus_miltoni.k141_841561                     C 0 I 18
s Plecturocebus_moloch.k141_890597                          27190 33 -     75465 T----TATAGGAA--------GC-AAAATTAAC----A------AAT----ATT-T-TATC-C-------------------------------------------------------
i Plecturocebus_moloch.k141_890597                      C 0 I 18
s Pongo_abelii.NDHI03003816.1                              191805 52 -    373494 T----TATAGGaa--------gc-aaaattaac----a------aat----att-t-tctc-c---c---ttc-taCAAC---TGT------ACA------C-------------C-C
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19812452 52 +  19899266 T----TATAGGAA--------GC-AAAATTAAC----A------AAT----ATT-T-TCTC-C---C---TTC-TACAAC---TGT------ACA------C-------------C-C
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                4614 53 -      9567 T----TAGAGGAA--------GT-GAAATTAAC----A------TAC----GTT-T-TCTG-T---C--TTCC-CACACC---CAC------ACA------A-------------A-C
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6853410 52 +  12164890 T----TATATGAA--------GC-aaaattaac----a------aac----att-t-tttt-c---c---ttc-cacacc---CAC------AAA------A-------------A-C
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     22219 52 -     30946 N----NNNNNNNN--------NN-NNNNNNNNN----N------NNN----NNN-N-NNNN-N---N---NNN-NNNNNN---NNN------NNN------N-------------N-N
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         8513 52 +     11805 T----TATAGGAA--------GC-AAAATTAAC----A------AAC----ATT-T-TCTT-C---C---TTC-CACACC---CAC------AAA------A-------------A-C
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           47847 52 +     52369 T----TATAGGAA--------GC-AAAATTAAC----A------AAC----ATT-T-TCTT-C---C---TTC-CACACC---CAC------AAA------A-------------A-C
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         40234 52 -     44753 T----TATAGGAA--------GC-AAAATTAAC----A------AAC----ATT-T-TCTT-C---C---TTC-CACACC---CAC------AAA------A-------------A-C
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            22157 52 +     27322 T----TATAGGAA--------GC-AAAATTAAC----A------AAC----ACT-T-TCTT-C---C---TTC-CACACC---CAC------AAA------A-------------A-C
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       21802 52 -     53241 T----TATAGGAA--------GC-AAAATTAAC----A------AAC----ATT-T-TCTT-C---C---TTC-CACACC---CAC------AAA------A-------------A-C
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         44065 52 -     48185 T----TATAGGAA--------GC-AAAATTAAC----A------AAC----ATT-T-TCTT-C---C---TTC-CACACC---CAC------AAA------A-------------A-C
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           39844 20 +     77221 T----TGTAGACA--------AT-AAAAATAC-----A--------------------------------------------------------------------------------
i Psammomys_obesus.NESX01026517.1                       C 0 I 20
s Pteronotus_parnellii.KE867983.1                            7625 28 -     27784 T----TATATGAA--------GC-AAAATGAACCAACA------T--------T-A--------------------------------------------------------------
i Pteronotus_parnellii.KE867983.1                       C 0 I 19
s Pteronura_brasiliensis.PteBra_flattened_line_1343        251781 44 -    344369 T----TATAGGAA--------GC-AAAATTAAC----A------T--------T-T-T----C---T---CC-TCACACT---CAC------ACA------G-------------A--
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB030474.1                              8976814 49 -  19980961 T----CGTAAGAA--------GC-AAAATTAACCAACA------T--------T-T-T----C---T---TCT-CATACC---CAC------ACA------A-------------A-C
i Pteropus_alecto.KB030474.1                            C 0 C 0
s Pteropus_vampyrus.KN525782.1                            3455877 49 -   6428604 T----TGTAAGAA--------GC-AAAATTAACCAACA------T--------T-T-T----C---T---TCT-CATACC---CAC------ACA------A-------------A-C
i Pteropus_vampyrus.KN525782.1                          I 46 C 0
s Puma_concolor.QAVW01000427.1                          131541349 48 - 161321710 T----TATAGGAA--------GC-AAAATTAGCGAACA------T--------T-T-T----C---T---CCC-CACACT---CAC------ACA------A-------------A--
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                22326 49 +     68503 T----CACAGGAA--------GT-AAAATTAAC----C-A-ATAT--------T-T-T----C---T---CCT-CATATC---CAC------ACA------C-------------A-C
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13918448 19 +  90463843 T----TGTagaca--------at-aa-aataa-----a--------------------------------------------------------------------------------
i Rattus_norvegicus.chr11                               C 0 I 25
s Rhinolophus_sinicus.LVEH01000179.1                      1794248 49 +   2252614 T----TATAAGAA--------GC-AAAATTCACCAACA------A--------T-T-T----C---T---CTT-CACACC---CAC------ACT------A-------------A-C
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_21814                2886 49 -     44886 T----TGTAAGAA--------GC-AAAATTGACCAACA------T--------T-T-T----C---T---TCT-CATACC---CAC------GCA------G-------------A-C
i Rousettus_aegyptiacus.RouAeg_scaffold_21814           I 40 I 71
s Saiga_tatarica.SaiTat_scaffold_371890                      3006 49 -      4338 T----CATAGGAA--------GC-AAAAATAAC----C-A-ATAT--------T-T-T----C---T---CCT-CATATC---CAC------ACA------A-------------A-C
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15677212 33 -  43202129 T----TATAGGaa--------gc-aaaattaac----a------aat----att-t-tatc-a-------------------------------------------------------
i Saimiri_boliviensis.NW_024100938.1                    C 0 I 18
s Saimiri_cassiquiarensis.k141_808270                        9125 33 +     34089 T----TATAGGAA--------GC-AAAATTAAC----A------AAT----ATT-T-TATC-A-------------------------------------------------------
i Saimiri_cassiquiarensis.k141_808270                   C 0 I 18
s Saimiri_macrodon.k141_2087127                              9065 33 -     60842 T----TATAGGAA--------GC-AAAATTAAC----A------AAT----ATT-T-TATC-A-------------------------------------------------------
i Saimiri_macrodon.k141_2087127                         C 0 I 18
s Saimiri_oerstedii.k141_841116                              9159 33 +     67014 T----TATAGGAA--------GC-AAAATTAAC----A------AAT----ATT-T-TATC-A-------------------------------------------------------
i Saimiri_oerstedii.k141_841116                         C 0 I 18
s Saimiri_sciureus.k141_1947592                              9136 33 +     60816 T----TATAGGAA--------GC-AAAATTAAC----A------AAT----ATT-T-TATC-A-------------------------------------------------------
i Saimiri_sciureus.k141_1947592                         C 0 I 18
s Saimiri_ustus.k141_1282476                                 9073 33 -     76454 T----TATAGGAA--------GC-AAAATTAAC----A------AAT----ATT-T-TATC-A-------------------------------------------------------
i Saimiri_ustus.k141_1282476                            C 0 I 18
s Sapajus_apella.ctg10                                   17345858 33 -  30362882 T----TATAGGAA--------GC-AAAATTAAC----A------AAT----ATT-T-TATC-A-------------------------------------------------------
i Sapajus_apella.ctg10                                  C 0 I 31
s Sapajus_macrocephalus.k141_966464                         25179 33 -     62485 T----TATAGGAA--------GC-AAAATTAAC----A------AAT----ATT-T-TATC-A-------------------------------------------------------
i Sapajus_macrocephalus.k141_966464                     C 0 I 31
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   41065 45 -    114521 T----TATCGGAA--------GC-AAAATAAAC----A------A--------T-T-T----T---T---CCT-CACATG---TAC------ACT------G-------------G-C
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  106345 24 -    120886 T----TGTAGACA--------AT-AAAAATAA-----T--------C----ATG----------------------------------------------------------------
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 I 24
s Solenodon_paradoxus.SolPar_flattened_line_1012            25718 44 +    739146 T----TATAA-AA--------GA-AAAATTAAC----A------A--------T-T-T----C---T---CTT-CACAGC---CAC------GTA------A-------------T-T
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 I 12
s Sorex_araneus.JH798170.1                               17775857 51 -  27805282 a----tagaaaaa----t---gc-aaaattaac----a------A--GTAT--T-T-T----C---T---CCT-CACACT---CAc------att------a------------gt-t
i Sorex_araneus.JH798170.1                              C 0 I 197
s Spermophilus_dauricus.KZ294190.1                        2244734 24 +   2842873 ---------------------------------------------------------tctc-c---C---CTC-GACACC---CAC------GCA------A-------------T-C
i Spermophilus_dauricus.KZ294190.1                      I 24 I 15
s Spilogale_gracilis.SpiGra_flattened_line_905             240556 44 -    276980 T----TATAGGAA--------GC-AAAATTAAC----A------T--------T-T-T----C---T---CCT-CACACT---CAC------ACA------A-------------T--
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            34751 49 +     62062 T----TATAAGAA--------GC-AAAATTAACAAACA------T--------TTT-T----C---T---CCC-CACACT---CAC------ACA------A-------------A--
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189276756 45 + 218635234 T----TACAGGAA--------Gc-aaaattaac----a------t--------t-t-t----c---t---ctt-CACATC---CAC------ACC------A-------------A-T
i Sus_scrofa.CM000824.4                                 C 0 I 12
s Symphalangus_syndactylus.tarseq_24                        19471 52 -  13920577 T----TATAGGAA--------GC-AAAATGAAC----A------AAT----ATT-T-TCTC-C---C---TTC-TAAAAC---TGT------ACA------C-------------C-C
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                3878 28 +     20549 T----TATAAGAA--------AC-AAAATTAACCAACA------T--------T-A--------------------------------------------------------------
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 I 19
s Tamandua_tetradactyla.TamTet_scaffold_26877               17970 51 +     45698 T----TTTAGGAC--------GG-AAA----AA----A------GGT----ATT-T-TCTC-C---T--TTC--CACACCCCACAC------ACA------G-------------A-C
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      812331 49 +   1148477 T----TTTAGGAA--------GC-AAAATTAAC----A-A-AC-A--------T-TTT----C---T---CCT-CACACC---CAC------ACA------A-------------A-C
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  62974 49 +     99546 T----TCTAGGAA--------AC-AAAATTAAC----A-A-AC-A--------T-TTT----C---T---CCT-CACACC---CAC------ACA------A-------------A-C
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194012594 52 - 194193292 T----TATAGGaa--------gc-aaaattaac----a------aat----att-t-tctc-c---c---ttc-tacAAC---TGT------ACA------C-------------C-C
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                  1156 53 -      3104 T----TATAGGAA--------GC-AAAGTTAAC----A------AAT----ATT-T-TCTC-C---C--TTCC-CACACC---CAC------ATA------G-------------A-C
i Tolypeutes_matacus.TolMat_scaffold_475685             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  139632 28 -    259118 T----CATAAGAA--------GC-AAAATTAACCAACA------T--------T-A--------------------------------------------------------------
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 I 19
s Tragulus_javanicus.TraJav_scaffold_14717                  10494 48 +     90398 T----TATAGGCA--------GC-AAAATTAAC----CAACA--T--------T-T-T----C---T---CC--CACATC---CAC------ACA------A-------------A-C
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16090525 28 +  31416278 ----------------------------------------------------tt-t-tctg-t---t--tttc-cacaCC---CAC------ACA------A-------------T-C
i Trichechus_manatus.JH594618.1                         I 21 C 0
s Tupaia_chinensis.KB320831.1                             2801773 52 -   3938065 G----TTTAGGAA--------GA-AGagctaat----a------aat----att-t-tctc-c---t---ttc-cacACC---AAC------ACA------A-------------A-T
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                   10596 52 +     13056 T----TTTAGGAA--------GA-AAAGCTAAT----A------AAT----ATT-T-TCTC-T---T---TTC-CACACC---AAC------ACA------A-------------A-T
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69318707 49 -  96451834 T----TATAGGAA--------GC-Acaattaac----a-aaca-t--------t-t-t----t---t---cct-CACAGT---CAC------ATA------A-------------A-C
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                    1453 45 +    136657 T----TAGAGGAA--------GC-AAAACAAAT----A------T--------T-T-T----C---T---CTT-TGCATC---TAT------ACC------A-------------G-C
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 C 0
s Ursus_maritimus.KK498671.1                              6522205 44 +  28682327 T----TATAGGaa--------gc-aaaattaac----a------t--------t-t-t----t---t---cct-cacact---cac------aca------c-------------a--
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                 10082 52 -     20643 T----TATAGGAA--------GC-AAAATTAAC----A------AAC----ATT-T-TCTT-C---C---TTC-CACACC---CAC------AAA------A-------------A-C
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             29617 52 -     33872 T----TATAGGAA--------GC-AAAATTAAC----A------AAC----ATT-T-TCTT-C---C---TTC-CACACC---CAC------AAA------A-------------A-C
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1529737 49 -   2331223 T----TATACGAA--------Gt-aaaattaacaaaca------t--------t-t-t----c---t---cct-caCATC---CAC------ACA------A-------------A-C
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                145879 44 -    281493 T----TATAGGGA--------GC-AAAATTAAC----A------T--------T-T-T----C---T---CCT-CACACT---CAC------ACA------A-------------A--
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       132230 24 -    134049 ---------------------------------------------------------TCTC-C---C---CTC-AACACC---CAC------ACT------A-------------T-C
i Xerus_inauris.XerIna_scaffold_7898                    I 24 I 15
s Zalophus_californianus.ZalCal_flattened_line_4097        221330 41 -    227762 T----TATAGGAA--------GG-AAAATTAAC----A------T--------TTT-T----C---T---CCT-CACA-------C------ACA------A-------------G--
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_202118                     1880 24 -      3360 T----TACACAGA--------GC-AACATTAA-----G--------C----ATT----------------------------------------------------------------
i Zapus_hudsonius.ZapHud_scaffold_202118                C 0 I 25
s Ziphius_cavirostris.ZipCav_flattened_line_60625            3292 49 -     13665 T----TATAGGAA--------GC-ACAATTAAC----AAACA--T--------T-T-T----C---T---CCT-CACAGC---CAC------ACA------A-------------A-C
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Hylobates_pileatus_a.tarseq_592                             37267 2881 -     60944 I
e Trachypithecus_pileatus.k141_532233                       30126  0 -     40754 I
e Trachypithecus_phayrei.ctg364                            232455  0 -   1198723 I
e Trachypithecus_obscurus.k141_411399                         131  0 +     12010 I
e Trachypithecus_melamera.k141_950981                        2232  0 -      3512 I
e Trachypithecus_leucocephalus.k141_352489                   1214  0 +      9423 I
e Trachypithecus_laotum.k141_897381                         45646  0 -     53586 I
e Trachypithecus_hatinhensis.k141_641377                     1240  0 +      1365 I
e Trachypithecus_germaini.k141_240878                        5067  3 -     24955 I
e Trachypithecus_geei.k141_137495                           30106  0 -     42322 I
e Trachypithecus_francoisi.k141_1012484                       874  0 +      8809 I
e Trachypithecus_cristatus.k141_968903                      32589  3 +     43409 I
e Trachypithecus_crepusculus.k141_863597                     4944  0 -     23436 I
e Trachypithecus_auratus.k141_672638                         4947  3 +     38635 I
e Tarsius_wallacei.k141_48636                               64696  0 +     65473 C
e Tarsius_lariang.k141_609102                               31387  0 +     42269 C
e Semnopithecus_vetulus.k141_748269                          4706  0 +     17284 I
e Semnopithecus_schistaceus.k141_628310                     45652  0 -     53123 I
e Semnopithecus_priam.k141_368201                           10107  0 -     20692 I
e Semnopithecus_johnii.k141_1300894                          1368  0 +     13764 I
e Semnopithecus_hypoleucos.k141_2141024                      1351  0 -      8815 I
e Semnopithecus_entellus.k141_1743075                       45578  0 +     45790 I
e Rhinopithecus_strykeri.ctg241                            462135  0 +   1472273 I
e Rhinopithecus_bieti.k119_554384                            2917  0 -     17045 C
e Pygathrix_nigripes_a.k141_758202                             3050  0 -      8240 I
e Pygathrix_nigripes_b.ctg25                                14340869  0 -  15297009 I
e Pygathrix_cinerea.k141_951151                              3033  0 -      8225 I
e Presbytis_mitrata.k141_1767317                            10996  0 +     15869 I
e Presbytis_comata.k141_678168                              11007  0 +     11126 I
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000342.1                3428480  0 -   4356645 I
e Piliocolobus_kirkii.k141_451083                            4879  0 -     13367 I
e Piliocolobus_gordonorum.k141_736355                       29715  0 +     67079 I
e Piliocolobus_badius.k141_512007                           29798  0 +     37672 I
e Nasalis_larvatus.k141_1382660                              4275  0 +      5784 I
e Colobus_polykomos.k141_1178012                               88  3 -     11758 I
e Colobus_guereza.LG08                                   96946830  0 - 156195979 I
e Colobus_angolensis.KN983490.1                            283936  0 +    886210 I
e Cephalopachus_bancanus.k141_702587                        12545  0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530  0 +    345090 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               18250 65 +    209709 T-----C-----T-----GAGAAA-GA----GAG--ACAG----TGTT----CC-A-AT-CAAGATGATGACAG-TA-----------------------TT---CT-----------GTGCA----CACAT-A-G-------GAAAGG
s Acinonyx_jubatus.LLWD01000356.1                         2041042 62 +   3721120 ------c-----t--ag-gagaca-ga----cag--acag----tgtt----cC-C-AC-CCAGATAGAGATAG-TA-----------------------TT---CT-----------GTGTA----CACTT-A-A-------GA----
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    118731 66 -    189883 A-----CTTGTCTA-TG-GG-ACA-GA----GA------G----TATT-----C-A-AC-AGGGCTGGAGGGAA-TG-----------------------CT---CA-----------GGGCA----CATAC-G-A-------GAA-AG
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10664981 63 +  23371972 ------c-----t-gag-GAGACA-AA----GAG--ACAG----TGTT----CC-T-AC-GGGGATGGAGACAG-TG-----------------------TT---CT-----------GTGTG----CACAC-A-A-------GA----
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7101929 63 -  16596857 ------c-----c-aag-gagaca-ga----gag--acag----tgtt----CC-T-AC-CAGGATGGAGACAG-TA-----------------------TT---CT-----------GTGTA----CGCAC-A-A-------GA----
i Ailurus_fulgens.LNAC01000003.1                        I 14 C 0
s Allactaga_bullata.AllBul_scaffold_141108                   2104 68 -      7259 T-----C-----TA-TG-GTGACA-GA----GAG--GCAG----AATT----CA-G-GC-AGGGCTGGAGACAG-TA-----------------------TA---CA-----------GAGCA----CATAC-A-A-------GAATAA
i Allactaga_bullata.AllBul_scaffold_141108              I 25 C 0
s Allenopithecus_nigroviridis.k141_2469532                   6123 65 -     60446 T-----C-----T-----GAGACA-GA----GAG--ACAG----TGTT----GC-A-AT-CAAGACAATGACAA-TA-----------------------TT---CT-----------GTGCA----CACAT-A-G-------AAAGTG
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         6839 63 -     29318 T-----C-----T-----GAGAC---A----GAG--ACAG----TGTT----GC-A-AT-CCAGACGATGACAA-TA-----------------------TT---CT-----------GTGCA----CACAT-A-G-------GAAGGG
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         5777 63 +     38766 T-----C-----T-----GAGAC---A----GAG--ACAG----TGTT----GC-A-AT-CCAGACGATGACAA-TA-----------------------TT---CT-----------GTGCA----CACAT-A-G-------GAAGGG
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          6733 65 -     80423 T-----C-----T-----GAGACA-GA----GAG--GCAG----TGTT----GC-A-AT-CAAGACGATGACAA-TA-----------------------TT---CT-----------GTGCA----CACAT-A-G-------GAAGGG
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              1711 63 +     19852 T-----C-----T-----GAGAC---A----GAG--ACAG----TATT----CT-G-AT-CAAGACGATGACAG-TA-----------------------TT---CT-----------GTACA----CATAT-T-G-------GGAGGG
i Alouatta_belzebul.k141_276091                         I 18 C 0
s Alouatta_caraya.k141_664908                                3973 24 -     12443 ---------------------------------------------------------------------------TA-----------------------TT---CT-----------GTACA----CATAT-T-G-------GGAGGG
i Alouatta_caraya.k141_664908                           I 36 C 0
s Alouatta_discolor.k141_2023149                             1254 63 +      5070 T-----C-----T-----GAGAC---A----GAG--ACAG----TATT----CT-G-AT-CAAGACGATGACAG-TA-----------------------TT---CT-----------GTACA----CATAT-T-G-------GGAGGG
i Alouatta_discolor.k141_2023149                        I 18 C 0
s Alouatta_juara.k141_799181                                  999 65 -      1641 T-----C-----T-----GAGACA-GA----AAG--ACAG----TATT----CC-G-AT-CAAGACGATGACAG-TA-----------------------TT---CT-----------GTACA----CATAT-T-G-------GGAGGG
i Alouatta_juara.k141_799181                            I 18 C 0
s Alouatta_macconnelli.k141_2318944                          3738 65 -     24210 T-----C-----T-----GAGACA-GA----GAG--ACAG----TATT----CT-G-AT-CAAGATGATGACAG-TA-----------------------TT---CT-----------GTACA----CATAT-A-G-------GGAGGG
i Alouatta_macconnelli.k141_2318944                     I 18 C 0
s Alouatta_nigerrima.k141_494922                              242 65 -      8325 T-----C-----T-----GAGACA-GA----AAG--ACAG----TATT----CC-G-AT-CAAGACGATGACAG-CA-----------------------TT---CT-----------GTACA----CATAT-T-G-------GGAGGG
i Alouatta_nigerrima.k141_494922                        I 18 C 0
s Alouatta_palliata.k141_405616                              6156 65 +     16794 T-----C-----T-----GAGACA-GA----AAG--ACAG----TATT----CC-G-AT-CAAGATGATGACAG-TA-----------------------TT---CT-----------GTACA----CATAT-T-G-------GGAGGG
i Alouatta_palliata.k141_405616                         I 18 C 0
s Alouatta_puruensis.k141_1602819                            1288 40 -      1470 T-----C-----T-----GAGACA-GA----GAG--ACAG----TATT----CT-G-AT-CAAGACGATGACA----------------------------------------------------------------------------
i Alouatta_puruensis.k141_1602819                       I 18 N 0
s Alouatta_seniculus.k141_790278                             5433 65 -      9835 T-----C-----T-----GAGACA-GA----AAG--ACAG----TATT----CC-G-AT-CAAGACGATGACAG-TA-----------------------TT---CT-----------GTACA----CATAT-T-G-------GGAGGG
i Alouatta_seniculus.k141_790278                        I 18 C 0
s Ammotragus_lervia.NIVO01013474.1                        3528179 64 +   4113121 T-----C-----TAA-A-GAGTCA-GA----GAG--GCTG----TGTT----CC-C-AT-CAGATTGGAGACAG-TC-----------------------TT---CT-----------GCATA----CTCAT-T-A-------GG----
i Ammotragus_lervia.NIVO01013474.1                      C 0 I 1
s Anoura_caudifer.AnoCau_scaffold_422                      394263 70 -    631301 T-----CT----TAA-G-GAGACA-GG----AAG--GCAG----TGTT----TC-C-AA-CAGAATGGAGACAG-AG-----------------------CT---CT-----------GTGTA----CTCAT-A-AG-GA-GAGA----
i Anoura_caudifer.AnoCau_scaffold_422                   I 19 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             5340 64 +     55446 T-----C-----TAA-A-GAGACA-GA----GAG--GCAG----TGTT----CC-C-AT-CAGATTGGAGACAG-TA-----------------------TT---CT-----------GTGTA----CTCAA-T-A-------GG----
i Antilocapra_americana.AntAmePen_scaffold_27338        I 19 I 1
s Aotus_azarae.k141_3170768                                 67059 47 +     78111 ---------------------------------------------------------------------------TATTCCGATCAAGACGATGACAGTACT---CT-----------GTGCA----CACAT-A-G-------GGAGGG
i Aotus_azarae.k141_3170768                             I 36 C 0
s Aotus_griseimembra.k141_3275623                           10003 47 +     22701 ---------------------------------------------------------------------------TATTCCGATCAAGACGATGACAGTACT---CT-----------GTGCA----CACAT-A-G-------GGAGGG
i Aotus_griseimembra.k141_3275623                       I 36 C 0
s Aotus_nancymaae.KZ196176.1                              5753970 47 +   9889416 ---------------------------------------------------------------------------TATTCCGATCAAGACGATGATAGTACT---CT-----------GTGCA----CACat-a-g-------ggaggg
i Aotus_nancymaae.KZ196176.1                            I 36 C 0
s Aotus_vociferans.k141_718647                              10576 47 +     23246 ---------------------------------------------------------------------------TATTCCAATCAAGACGATGACAGTACT---CT-----------GTGCA----CACAT-A-G-------GGAGGG
i Aotus_vociferans.k141_718647                          I 36 C 0
s Aotus_trivirgatus.k141_1740727                            10551 18 -    104377 T-----C-----T-----GAGACA-GA----GAG--ACAG-------------------------------------------------------------------------------------------------------------
i Aotus_trivirgatus.k141_1740727                        I 18 I 25
s Aplodontia_rufa.AprRuf_scaffold_101456                     3229 51 +     11424 ------------------------------------ACAG----AGTG----CT-A-AA-AGGGATGGAGACAG-TA-----------------------TT---CT-----------GTGCA----CATAT-A-A-------AGAGTG
i Aplodontia_rufa.AprRuf_scaffold_101456                I 15 C 0
s Arctocebus_calabarensis.k141_587554                        7134 65 +      9265 T-----C-----T-----GAGATG-GA----AAG--ACAG----TGCT----CC-T-AT-TAACATGGGGACAA-TA-----------------------AT---CT-----------GTTAG----CAGAT-A-A-------GGGGAG
i Arctocebus_calabarensis.k141_587554                   I 24 I 1
s Artibeus_jamaicensis.ArtJam_scaffold_41619                12556 70 -     29036 G-----C-----TA-GG-GAGACA-GG----AAG--GAAG----TATT----TA-C-AA-CAGAATGGAGACAG-AG-----------------------TT---CT-----------GTGTA----CTGAT-A-AG-GAAGAGG----
i Artibeus_jamaicensis.ArtJam_scaffold_41619            I 19 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9543843 65 +  39197703 T-----C-----T-----GAGACA-GA----GAG--ACAG----TATT----CC-G-AT-CAAGATGATGACAG-TA-----------------------TT---CT-----------GTACA----CACAT-T-G-------GGAGGG
i Ateles_geoffroyi_b.tarseq_2582                           I 18 C 0
s Ateles_belzebuth.k141_1348307                             65117 65 +     85812 T-----C-----T-----GAGACA-GA----GAG--ACAG----TATT----CC-G-AT-CAAGATGATGACAG-TA-----------------------TT---CT-----------GTACA----CACAT-T-G-------GGAGGG
i Ateles_belzebuth.k141_1348307                         I 18 C 0
s Ateles_chamek.k141_1072810                                16130 65 +     89302 T-----C-----T-----GAGACA-GA----GAG--ACAG----TATT----CC-G-AT-CAAGATGATGACAG-TA-----------------------TT---CT-----------GTACA----CACAT-T-G-------GGAGGG
i Ateles_chamek.k141_1072810                            I 18 C 0
s Ateles_geoffroyi_a.k141_1300742                             20631 65 -     58268 T-----C-----T-----GAGACA-GA----GAG--ACAG----TATT----CC-G-AT-CAAGATGATGACAG-TA-----------------------TT---CT-----------GTACA----CACAT-T-G-------GGAGGG
i Ateles_geoffroyi_a.k141_1300742                         I 18 C 0
s Ateles_marginatus.k141_899112                             68625 65 +    119057 T-----C-----T-----GAGACA-GA----GAG--ACAG----TATT----CC-G-AT-CAAGATGATGACAG-TA-----------------------TT---CT-----------GTACA----CACAT-T-G-------GGAGGG
i Ateles_marginatus.k141_899112                         I 18 C 0
s Ateles_paniscus.k141_1631200                              10594 65 -     25888 T-----C-----T-----GAGACA-GA----GAG--ACAG----TATT----CC-G-AT-CAAGATGATGACAG-TA-----------------------TT---CT-----------GTACA----CACAT-T-G-------GGAGGG
i Ateles_paniscus.k141_1631200                          I 18 C 0
s Avahi_laniger.k141_2840928                                11657 65 -     16375 T-----C-----T-----GAGACA-GA----GAG--AC--A--GTGTT----CC-C-AT-AAAGATGGGGACAG-TA-----------------------TT---CT-----------GTGAG----AACAT-A-A-------GAAGGG
i Avahi_laniger.k141_2840928                            C 0 I 1
s Avahi_peyrierasi.k141_798820                               5273 65 +      6337 T-----C-----T-----GAGACA-GA----GAG--AC--A--GTGTT----CC-C-AT-AAAGATGGGGACAG-TA-----------------------TT---CT-----------GTGAG----AACAT-A-A-------GAAGGG
i Avahi_peyrierasi.k141_798820                          C 0 I 1
s Balaenoptera_acutorostrata.KI537095.1                  26385564 67 +  51448160 T-----C-----t-aag-gagaca-ga----gag--gcag----tGTT----CC-C-AG-CAGAATGGAGACAG-TA-----------------------TTCTTCT-----------GTGTA----CTCAT-A-A-------GG----
i Balaenoptera_acutorostrata.KI537095.1                 C 0 I 1
s Balaenoptera_bonaerensis.DF502048.1                       10737 67 -     13118 T-----C-----t-aag-gagaca-ga----gag--gcag----TGTT----CC-C-AG-CAGAATGGAGACAG-TA-----------------------TTCTTCT-----------GTGTA----CTCAT-A-A-------GG----
i Balaenoptera_bonaerensis.DF502048.1                   C 0 I 1
s Beatragus_hunteri.BeaHun_scaffold_21644                   50148 64 -     72089 T-----C-----TAA-A-GAGTCA-GA----GAG--GCAG----TGTT----CC-C-AT-CAGATTGGAGACAG-TA-----------------------TT---CT-----------GTGTA----CTCAT-T-A-------GG----
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 I 1
s Bison_bison.KN264915.1                                   305098 64 -   6870073 T-----C-----TAA-A-GAGTCA-GA----GAG--GCAG----TGTT----CC-C-AT-CAGATTGGAGACAG-GA-----------------------TT---CT-----------GTGTA----CTCAT-T-A-------GG----
i Bison_bison.KN264915.1                                C 0 I 1
s Bos_indicus.CM003021.1                                 22959204 64 + 161108492 T-----C-----TAA-A-GAGTCA-GA----GAG--GCAG----TGTT----CC-C-AT-CAGATTGGAGACAG-GA-----------------------TT---CT-----------GTGTA----CTCAT-T-A-------GG----
i Bos_indicus.CM003021.1                                C 0 I 1
s Bos_mutus.JH883513.1                                     421383 64 +    998990 T-----C-----TAA-A-GAGTCA-GA----GAG--GCAG----TGTT----CC-C-AT-CAGATTGGAGACAG-GA-----------------------TT---CT-----------GTGTA----CTCAT-T-A-------GG----
i Bos_mutus.JH883513.1                                  C 0 I 1
s Bos_taurus.CM000177.6                                  22667856 64 + 158972876 T-----C-----TAA-A-GAGTCA-GA----GAG--GCAG----TGTT----CC-C-AT-CAGATTGGAGACAG-GA-----------------------TT---CT-----------GTGTA----CTCAT-T-A-------GG----
i Bos_taurus.CM000177.6                                 C 0 I 1
s Bubalus_bubalis.KI419065.1                               676694 64 +   1914593 T-----C-----TAA-A-GAGTCA-GA----GAG--GCAG----TGTT----CC-C-AT-CAGATTGGAGACAG-TA-----------------------TT---CT-----------GTGTA----CTCAT-T-A-------GG----
i Bubalus_bubalis.KI419065.1                            C 0 I 1
s Cacajao_ayresi.k141_724503                               118494 65 -    171031 T-----C-----A-----GACACA-GA----GAG--ACAG----TATT----CC-G-AT-CGAGACAATGACAG-TA-----------------------TT---CT-----------GTGCA----CACAT-A-G-------GGAAGG
i Cacajao_ayresi.k141_724503                            I 18 C 0
s Cacajao_calvus.k141_96166                                 17514 65 +    125063 T-----C-----A-----GACACA-GA----GAG--ACAG----TATT----CT-G-AT-CCAGACAATGACAG-TA-----------------------TT---CT-----------GTGCA----CACAT-A-G-------GGAAGG
i Cacajao_calvus.k141_96166                             I 18 C 0
s Cacajao_hosomi.k141_303789                                19561 65 -    216513 T-----C-----A-----GACACA-GA----GAG--ACAG----TATT----CC-G-AT-CCAGACAATGACAG-TA-----------------------TT---CT-----------GTGCA----CACAT-A-G-------GGAAGG
i Cacajao_hosomi.k141_303789                            I 18 C 0
s Cacajao_melanocephalus.k141_1160263                       12104 65 -    134917 T-----C-----A-----GACACA-GA----GAG--ACAG----TATT----CC-G-AT-CCAGACAATGACAG-TA-----------------------TT---CT-----------GTGCA----CACAT-A-G-------GGAAGG
i Cacajao_melanocephalus.k141_1160263                   I 18 C 0
s Camelus_bactrianus.KN276303.1                           3224678 64 -   8989139 T-----C-----t-aag-gagaca-ga----gag--gcag----cGTT----CT-C-AC-CAGAATGGAGACAG-TA-----------------------TT---CT-----------GTGTA----CTCAT-C-A-------GG----
i Camelus_bactrianus.KN276303.1                         C 0 I 1
s Camelus_dromedarius.KN271192.1                           402378 64 -  15254737 T-----C-----t-aag-gagaca-ga----gag--gcag----cGTT----CT-C-AC-CAGAATGGAGACAG-TA-----------------------TT---CT-----------GTGTA----CTCAT-C-A-------GG----
i Camelus_dromedarius.KN271192.1                        C 0 I 1
s Camelus_ferus.KB016973.1                                2978116 64 +   6889770 T-----c-----t-aag-gagaca-ga----gag--gcag----cGTT----CT-C-AC-CAGAATGGAGACAG-TA-----------------------TT---CT-----------GTGTA----CTCAT-C-A-------GG----
i Camelus_ferus.KB016973.1                              C 0 I 1
s CanFam4.chr31                                          11527839 46 +  39901454 ------C-----TAA-G-GAGACA-GA----GAG--ACAG----TGTT----CC-T-AC-CAGGATGGAGACAG-CA-----------------------T------------------------------------------------
i CanFam4.chr31                                         C 0 I 11
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   22813 46 +     87036 ------C-----TAA-G-GAGACA-GA----GAG--ACAG----TGTT----CC-T-AC-CAGGATGGAGACAG-CA-----------------------T------------------------------------------------
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 I 11
s Canis_lupus_dingo.QKWQ01001993.1                       11274736 46 -  35597290 ------c-----t-aag-gagaca-ga----gag--acag----tgtT----CC-T-AC-CAGGATGGAGACAG-CA-----------------------T------------------------------------------------
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 I 11
s Canis_lupus_familiaris.chr31                           11097233 46 +  39895921 ------c-----t-aag-gagaca-ga----gag--acag----tgtT----CC-T-AC-CAGGATGGAGACAG-CA-----------------------T------------------------------------------------
i Canis_lupus_familiaris.chr31                          C 0 I 11
s Canis_lupus_orion.HG994411.1                           16464018 46 -  44759192 ------c-----t-aag-gagaca-ga----gag--acag----tgtT----CC-T-AC-CAGGATGGAGACAG-CA-----------------------T------------------------------------------------
i Canis_lupus_orion.HG994411.1                          C 0 I 11
s Capra_aegagrus.CM003214.1                              21335612 64 + 157394656 T-----C-----TAA-A-GAGTCA-GA----GAA--GCAG----TGTT----CC-C-AT-CAGATTGGAGACAG-TC-----------------------TT---CT-----------GCGTA----CTCAT-T-A-------GG----
i Capra_aegagrus.CM003214.1                             C 0 I 1
s Capra_hircus.CM004562.1                               135713965 64 - 157403528 T-----C-----TAA-A-GAGTCA-GA----GAA--GCAG----TGTT----CC-C-AT-CAGATTGGAGACAG-TC-----------------------TT---CT-----------GCGTA----CTCAT-T-A-------GG----
i Capra_hircus.CM004562.1                               C 0 I 1
s Capromys_pilorides.CapPil_scaffold_780116                   222 66 +      1571 T-----C-----TAA-A-G-GACA-GG----AAG--TCAA----TGTT----CC-A-AC-GGGGATGGAGACAG-TG-----------------------TT---CT-----------GTGC-----CACGT-A-A-------GGCAGG
i Capromys_pilorides.CapPil_scaffold_780116             I 19 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               63550 70 +     67245 T-----C-----TAA-G-GAGACA-GG----AAG--GACG----TGTT----TC-C-AA-CAGAATGGAGACAG-AG-----------------------TT---CT-----------GTGTA----CTCAT-A-AG-GAAGAGA----
i Carollia_perspicillata.CarPer_scaffold_4436           I 19 C 0
s Castor_canadensis.CasCan_scaffold_1326                      693 38 -    202837 ------------------------------------------------------------AGGGACAGAAACAG-TA-----------------------TT---TC-----------ATGAA----TGCAT-A-A-------GGAGGG
i Castor_canadensis.CasCan_scaffold_1326                I 52 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   164420 47 -    276539 ------------------------------------GCAG----TGTT----TC-T-AC-CAGAATAGAGACAG-TA-----------------------TT---CT-----------GTGTA----CTTAT-A-A-------GA----
i Catagonus_wagneri.CatWag_scaffold_1305                I 11 I 21
s Cavia_aperea.AVPZ01000278.1                            15790362 67 -  24422027 N-----N-----N-NNN-N-NNNN-NN----NNN--NNNN----NNNN----NN-N-NN-NNNNNNNNNNNNNN-NN-----------------------NN---NN-----------NNNNN----NNNNN-N-N-------NNNNNN
i Cavia_aperea.AVPZ01000278.1                           I 21 I 4
s Cavia_porcellus.DS562889.1                             15802301 67 -  24440124 T-----C-----TAA-G-G-GTCA-GA----GAG--ATAA----TATT----CC-A-GC-AGGGATGGAGACAG-TG-----------------------TT---CT-----------GTCCG----Cacat-g-a-------agacag
i Cavia_porcellus.DS562889.1                            I 21 I 4
s Cavia_tschudii.CavTsc_scaffold_488                       180473 67 +    436027 T-----C-----TAA-G-G-GTCA-GA----GAG--ATAA----TATT----CC-A-GC-AGGGATGGAGACAG-TG-----------------------TT---CT-----------GTCCG----CACAT-G-A-------AGACAG
i Cavia_tschudii.CavTsc_scaffold_488                    I 21 I 4
s Cebus_albifrons.Contig22                               18896234 29 -  29618158 ---------------------------------------------------------------------GACAG-TA-----------------------CT---CT-----------GTGCA----CACAT-A-G-------GGAAGG
i Cebus_albifrons.Contig22                              I 31 C 0
s Cebus_olivaceus.k141_93739                                12884 29 -     26817 ---------------------------------------------------------------------GACAG-TA-----------------------CT---CT-----------GTGCA----CACAT-A-G-------GGAAGG
i Cebus_olivaceus.k141_93739                            I 31 C 0
s Cebus_unicolor.k141_239009                                17128 29 +     25043 ---------------------------------------------------------------------GACAG-TA-----------------------CT---CT-----------GTGCA----CACAT-A-G-------GGAAGG
i Cebus_unicolor.k141_239009                            I 31 C 0
s Ceratotherium_simum.JH767818.1                          4369644 62 +   7569818 t-----c-----t-gag-gagaca-g------ag--acag----tgtT----CC-C-AC-CAGAATGTAGACTA-TA-----------------------TT---CT-----------GTGTA----CTTAT-A-A-------TG----
i Ceratotherium_simum.JH767818.1                        I 24 I 7
s Cercocebus_atys.KQ010443.1                              6560063 65 +   6739814 T-----C-----T-----GAGACA-GA----GAG--ACAG----TGTT----GC-A-AT-CAAGACGATTACAA-TA-----------------------TT---CT-----------GTGCA----CACat-a-g-------gaaggg
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      31540 65 +     60454 T-----C-----T-----GAGACA-GA----GAG--ACAG----TGTT----GC-A-AT-CAAGACGATTACAA-TA-----------------------TT---CT-----------GTGCA----CACAT-A-G-------GAAGGG
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          6744 65 -     21101 T-----C-----T-----GAGACA-GA----GAG--ACAG----TGTT----GC-A-AT-CAAGACGATTACAA-TA-----------------------TT---CT-----------GTGCA----CACAT-A-G-------GAAGGG
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         64054 65 -    107033 T-----C-----T-----GAGACA-GA----GAG--ACAG----TGTT----GC-A-AT-CAAGACGATTACAA-TA-----------------------TT---CT-----------GTGCA----CACAT-A-G-------GAAGGG
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        6917 65 -     17608 T-----C-----T-----GAGACA-GA----GAG--ACAG----TGTT----GC-A-AT-CAAGACAATGACAA-TA-----------------------TT---CT-----------GTGCA----CACAT-A-G-------GAAGGG
i Cercopithecus_ascanius.k141_4123525                   C 0 I 5
s Cercopithecus_cephus.k141_3893260                          4082 65 +     45019 T-----C-----T-----GAGACA-GA----GAG--ACAG----TGTT----GC-A-AT-CAAGACGATGACAA-TA-----------------------TT---CT-----------GTGCA----CACAT-A-G-------GAAGGG
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           4358 65 +     15177 T-----C-----T-----GAGACA-GA----GAG--ACAG----TGTT----GC-A-AT-CACGACGATGACAA-TA-----------------------TT---CT-----------GTGCA----CACAT-A-G-------GAAGGG
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          6964 65 +     16677 T-----C-----T-----GAGACA-GA----GAG--ACAG----TGTT----GC-A-AT-CAAGACAATGACAA-TA-----------------------TT---CT-----------GTGCA----CACAT-A-G-------GAAGTG
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           29154 65 +     35983 T-----C-----T-----GAGACA-GA----GAG--ACAG----TGTT----GC-A-AT-CAAGACGATGACAA-TA-----------------------TT---CT-----------GTGCA----CACAC-A-G-------GAAGGG
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11995685 65 +  12117833 T-----C-----T-----GAGACA-GA----GAG--ACAG----TGTT----GC-A-AT-CAAGACAATGACAA-TA-----------------------TT---CT-----------GTGCA----CACAT-A-G-------GAAGGG
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46482661 65 +  46592721 T-----C-----T-----GAGACA-GA----GAG--ACAG----TGTT----GC-A-AT-CAAGACGATGACAA-TA-----------------------TT---CT-----------GTGCA----CACAC-A-G-------GAAGGG
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                        778 65 -     27215 T-----C-----T-----GAGACA-GA----GAG--ACAG----TGTT----GC-A-AT-CACGACGATGACAA-TA-----------------------TT---CT-----------GTGCA----CACAT-A-G-------GAAGGG
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       6978 65 +     35577 T-----C-----T-----GAGACA-GA----GAG--ACAG----TGTT----GC-A-AT-CAAGACGATGACAA-TA-----------------------TT---CT-----------GTGCA----CACAT-A-G-------GAAGGG
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        6772 65 -     25661 T-----C-----T-----GAGACA-GA----GAG--ACAG----TGTT----GC-A-AT-CAAGACGATGACAA-TA-----------------------TT---CT-----------GTGCA----CACAT-A-G-------GAAGGG
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        6944 65 -     17744 T-----C-----T-----GAGACA-GA----GAG--ACAG----TGTT----GC-A-AT-CACGACGATGACAA-TA-----------------------TT---CT-----------GTGCA----CACAT-A-G-------GAAGGG
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        26313 65 +     37128 T-----C-----T-----GAGACA-GA----GAG--ACAG----TGTT----GC-A-AT-CACGACGATGACAA-TA-----------------------TT---CT-----------GTGCA----CACAT-A-G-------GAAGGG
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           5360 65 -      6963 T-----T-----AAA-G-GAGATG-GG----GAG--ACAA----TGTT----CT-G-AC-TGAGATAGAGACAG-TA-----------------------TT---CT-----------GTGCA----TACAT-A-A-------A---AG
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           63873 65 -     68416 T-----C-----T-----GAGATA-GA----AAG--A----CAGTGTT----CC-C-TT-CAAGATGGGAACAG-TA-----------------------TT---CT-----------GTGAG----CACAT-A-A-------GGAGGG
i Cheirogaleus_major.k141_1157592                       C 0 I 1
s Cheirogaleus_medius.k141_854352                             180 60 +     27737 --------------------aaaa-ga----aaG--A----CAGTGTT----CC-C-TT-CAAGATGGGGACAG-TA-----------------------TT---CT-----------GTGAG----CACAT-A-A-------GGAGGG
i Cheirogaleus_medius.k141_854352                       N 0 I 1
s Cheracebus_lucifer.k141_619653                            10157 62 -     18223 T-----C-----T-----GAGACA-GA----GAG--ACAG----TATT----CT-G-AT-CAAGAC---GACAG-CA-----------------------TT---TA-----------GTGCA----CACAT-A-G-------GGAGGG
i Cheracebus_lucifer.k141_619653                        I 18 C 0
s Cheracebus_lugens.k141_996499                              1895 65 +    188999 T-----C-----T-----GAGACA-GA----GAG--ACAG----TATT----CT-G-AT-CAAGACGATGACAG-CA-----------------------TT---TA-----------GTGCA----CACAT-A-G-------GGAGGG
i Cheracebus_lugens.k141_996499                         I 18 C 0
s Cheracebus_regulus.k141_2128895                           46194 65 +     57117 T-----C-----T-----GAGACA-GA----GAG--ACAG----TATT----CT-G-AT-CAAGACGATGACAG-CA-----------------------TT---TA-----------GTGCA----CACAT-A-G-------GGAGGG
i Cheracebus_regulus.k141_2128895                       I 18 C 0
s Cheracebus_torquatus.k141_315545                          50874 65 +     54541 T-----C-----T-----GAGACA-GA----GAG--ACAG----TATT----CT-G-AT-CAAGACGATGACAG-CA-----------------------TT---TA-----------GTGCA----CACAT-A-G-------GGAGGG
i Cheracebus_torquatus.k141_315545                      I 18 C 0
s Chinchilla_lanigera.JH721867.1                         15965057 67 +  43084221 T-----C-----CAA-G-G-GACA-AG----AAG--ATGA----TATT----CC-A-AC-AGCTATGGAGACAG-TG-----------------------TT---CT-----------GTGCa----cccag-g-a-------ggagga
i Chinchilla_lanigera.JH721867.1                        I 21 I 3
s Chiropotes_israelita.k141_1189915                         75675 65 +    196370 T-----C-----A-----GACACA-GA----GAG--ACAG----TATT----CC-G-AT-CAAGACAATGACAG-TA-----------------------TT---CT-----------GTGCA----CACAT-A-G-------GGAAGG
i Chiropotes_israelita.k141_1189915                     I 18 C 0
s Chiropotes_sagulatus.k141_773804                          19856 65 +     40510 T-----C-----A-----GACACA-GA----GAG--ACAG----TATT----CC-G-AT-CAAGACAATGACAG-TA-----------------------TT---CT-----------GTGCA----CACAT-A-G-------GGAAGG
i Chiropotes_sagulatus.k141_773804                      I 18 C 0
s Chlorocebus_aethiops.ctg22                             15144498 65 -  15256731 T-----C-----T-----GAGACA-GA----GAG--ACAG----TGTT----GC-A-AT-CAAGACAATGACAA-TA-----------------------TT---CT-----------GTGCA----CACAT-A-G-------GAAGGG
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      38962 65 -     53260 T-----C-----T-----GAGACA-GA----GAG--ACAG----TGTT----GC-A-AT-CAAGACAATGACAA-TA-----------------------TT---CT-----------GTGCA----CACAT-A-G-------GAAGGG
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101149521 65 + 101219884 T-----C-----T-----GAGACA-GA----GAG--ACAG----TGTT----GC-A-AT-CAAGACAATGACAA-TA-----------------------TT---CT-----------GTGCA----CAcat-a-g-------gaaggg
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                19375 68 -     21363 T-----T-----TAA-A-AAGATG-GG----GAG--GCAA----TGTT----CT-G-AC-TGGTGTAGAGACAA-TC-----------------------TT---CT-----------GTGCA----TATAT-A-A-------AAAGAG
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           764679 68 +    964067 T-----T-----TAA-A-AAGATG-GG----GAG--GCAA----TGTT----CT-G-AC-TGGTGTAGAGACAA-TC-----------------------TT---CT-----------GTGCA----Tatat-a-a-------aaagag
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_954668              1618 53 -      1738 --------------------------------AG--AAAA----TATT----CT-A-GC-CTGGATGGACACAG-GA-----------------------TT---CT-----------TGGCA----TATGT-A-A-------CAAGGG
i Chrysochloris_asiatica.ChrAsi_scaffold_954668         I 7 C 0
s Condylura_cristata.JH655880.1                          60623676 62 +  78930452 T-----C-----TAA-G-GATATT-GG----CAG--ACAC----TGTT----CC-T-AT-CAGGATGGAGACAC-TA-----------------------CA---CT-----------GT--A----ATCAA-G-A-------GA----
i Condylura_cristata.JH655880.1                         C 0 I 1
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         4067 70 -      5782 T-----C-----TAA-G-AAGACA-GG----AAG--GAAG----TATT----CA-T-TT-CGAAATGGAGACAG-CA-----------------------TT---CT-----------GTGCA----CTCAT-A-AG-GAAGGGC----
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 I 1
s Cricetomys_gambianus.CriGam_scaffold_949                 283637 63 -    399297 T-----C-----TA-TG-GGAACA-GT----GA------A----TGTT----CA-A-AC-AGGACTGGAGATAG-TA-----------------------TT---CA-----------GGGAA----CACAC-A-A-------GAA-AC
i Cricetomys_gambianus.CriGam_scaffold_949              I 24 C 0
s Cricetulus_griseus.LT883672.1                          53035942 69 +  72327488 T-----T-----T--CTGGG--AA-CT----GA------G----TGTT----TG-A-AC-AGGGCAGGAGGTGG-TA-----------------------CT---CAGGTGGTGCTCAGGACA----CACAG-A-A-------Ga----
i Cricetulus_griseus.LT883672.1                         I 24 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              3570 61 -     22648 ------------TAA-A-GATACA-GA----AAA--ACAG----AGCT----AC-T-AC-CAGGAAGAAGACAA-TA------------------------T---CT-----------ATGTA----CTGCT-A-A-------GA----
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 I 3
s Cryptoprocta_ferox.CryFer_flattened_line_19014            59053 63 -     70449 ------C-----TAA-G-AAAAGA-GA----GAG--ACAG----TGTT----CC-C-AC-CTGGTTGGAGACAG-TA-----------------------TT---CT-----------GTGTA----CACAT-A-A-------GA----
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  214939 45 -    956709 T-----C-----TGA-G-GAGCCA-GA----GAG--ACAG----TGTT----TG-T-AT-GGGAACAGAGACAG-T-------------------------------------------------------------------------
i Ctenodactylus_gundi.CteGun_scaffold_447               I 24 I 21
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 36588 67 -     67205 T-----C-----CA-CG-G-GACA-GG----GAG--TCGA----TGTT----CC-A-AC-AAGGATGGAGACAG-TG-----------------------TT---CT-----------GTGCC----CACAT-G-A-------GGAGAG
i Ctenomys_sociabilis.CteSoc_scaffold_19489             I 3 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                21550 67 +     26546 T-----C-----TAA-G-G-GTCA-GG----GAG--ATGA----TGTT----CC-A-AC-AGGGATGGAGACAG-TG-----------------------TT---CT-----------GTTCA----CACAT-G-G-------GGATGG
i Cuniculus_paca.CunPac_flattened_line_16637            I 21 I 5
s Dasyprocta_punctata.DasPun_flattened_line_634             62690 67 -    236241 T-----C-----TAA-G-G-GTCA-GG----GAG--ATGA----TCTT----CC-A-AC-AGGGATGGAGGCAG-TA-----------------------GT---CT-----------GTGCA----CATAT-G-A-------AGACAG
i Dasyprocta_punctata.DasPun_flattened_line_634         I 21 I 8
s Dasypus_novemcinctus.JH568778.1                          186407 65 -   6883506 T-----T-----TAA-G-GAAATG-GG----GAG--ACAA----TGTC----CC-G-AC-TCGGATAGAGACAG-CA-----------------------TT---CT-----------GTGCA----TACAT-A-A-------G---AG
i Dasypus_novemcinctus.JH568778.1                       C 0 I 2
s Daubentonia_madagascariensis.ctg11                     16849819 65 +  31942871 T-----C-----T-----GAGACA-CA----AAG--ACAG----TGTT----CC-C-AT-CAAGATGGGGACAG-TA-----------------------TG---CT-----------GTGAG----CATGT-a-a-------ggaggg
i Daubentonia_madagascariensis.ctg11                    C 0 I 1
s Delphinapterus_leucas.KZ290064.1                       80042161 67 -  96802777 T-----C-----TAA-G-GAGACA-GA----GAG--GCAG----TGCT----CC-C-AC-GAGAATGGAGACAG-TA-----------------------TTCTTCC-----------GTGTA----CTCAT-A-A-------GG----
i Delphinapterus_leucas.KZ290064.1                      C 0 I 1
s Desmodus_rotundus.KZ672188.1                           18702766 70 -  18957592 T-----c-----t-aag-gagaca-gg----aag--gaag----tgTT----TC-C-AG-CAGAATGGAGACAG-AG-----------------------TT---CT-----------GTGTA----CTCAT-A-AG-GAAGAGA----
i Desmodus_rotundus.KZ672188.1                          I 1050 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 328043 62 +    993696 t-----c-----t-gag-gagaca-g------ag--acag----tGTT----CC-A-AC-CATGTTGTAGACTA-TA-----------------------TT---CT-----------GTGTA----GTTAT-A-A-------GG----
i Dicerorhinus_sumatrensis.PEKH010003161.1              I 24 I 7
s Diceros_bicornis.DicBicMic_scaffold_9545                   8677 62 +    151128 T-----C-----TGA-G-GAGACA-G------AG--ACAG----TATT----CC-C-AC-CAGGACGTAGACTA-TA-----------------------TT---CT-----------GTGTA----CTTAT-A-A-------GG----
i Diceros_bicornis.DicBicMic_scaffold_9545              I 24 I 7
s Dinomys_branickii.DinBra_scaffold_1996                   160530 67 +    228994 T-----C-----TAA-G-G-GACA-AG----GAG--ATAA----CGTT----CC-A-AC-AGCTATGGAGACAG-TG-----------------------TT---CT-----------GTGCA----CCCAT-G-A-------GGACGA
i Dinomys_branickii.DinBra_scaffold_1996                I 23 I 3
s Dipodomys_ordii.KN672545.1                              3660990 31 +   4240102 ------------------------------------ACAG----TGTT----CC-C-AC-CGAAATGGAAAGTA-TA-----------------------CA-----------------------------------------------
i Dipodomys_ordii.KN672545.1                            I 35 I 8
s Dipodomys_stephensi.DipSte_scaffold_84338                  3364 31 -     11986 ------------------------------------ACAG----CGTT----CC-C-AC-CGAAATGGAAAGTA-TA-----------------------CA-----------------------------------------------
i Dipodomys_stephensi.DipSte_scaffold_84338             I 35 I 8
s Dolichotis_patagonum.DolPat_scaffold_14102                41259 67 -     73477 T-----T-----GAA-A-G-GTCA-GA----AAG--ATAA----TGTT----CA-G-GC-AGGGATGGAGATAG-TG-----------------------TT---CC-----------GTCCA----CACAT-G-A-------GGACAG
i Dolichotis_patagonum.DolPat_scaffold_14102            I 21 I 4
s Echinops_telfairi.JH980316.1                           23000601 62 -  44670279 ------------------AAGACA-AG----GAG--ACAT----TGTT----GT-A-AC-CAAGATGAAGACAG-AA-----------------------TT---CA-----------TGACA----TACTT-A-A-------CACGGG
i Echinops_telfairi.JH980316.1                          I 2 I 2
s Eidolon_helvum.AWHC01235761.1                              3640 70 -      8619 T-----C-----TAA-G-GAGATG-GG----GAG--AAGG----TATT----CC-C-AC-GAGGGTGGAGACAG-CA-----------------------TT---CT-----------GTGTA----CTCAT-A-AG-GAAGAGA----
i Eidolon_helvum.AWHC01235761.1                         C 0 I 1
s Elaphurus_davidianus.JRFZ01086400.1                     1498093 64 +   1727528 T-----C-----TGA-A-CAGACA-GA----GAG--GCAG----TGTT----CC-C-AT-CAAATTGGAGACAG-TA-----------------------TT---CT-----------GCGTA----CTCAT-T-A-------GG----
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 I 1
s Elephantulus_edwardii.JH947210.1                        7834858 59 +  15467074 ------------------AAGATA-GG----AAC--ACA-----TGTT----TT-A-AC-AAGGATGGAGACAG-TA-----------------------TT---CC-----------TTCCA----TATGT-A-A-------TAAT--
i Elephantulus_edwardii.JH947210.1                      I 2 C 0
s Ellobius_lutescens.LOEQ01003611.1                        244678 54 -    369425 T-----C-----T-GGG-GA--CA-CA----GA------G----TATT-----T-A-AC-AGTGCAGAAGGTGG-TA-----------------------TC---CA-----------GGGCA----CATAG-A---------------
i Ellobius_lutescens.LOEQ01003611.1                     I 20 C 0
s Ellobius_talpinus.LOJH01076532.1                           1022 54 +      9159 T-----C-----TGA-G-GA--CA-CA----GA------G----TATT-----T-A-AC-AGGGCAGAAGGTGG-TA-----------------------TC---CA-----------GGGCA----CAtag-a---------------
i Ellobius_talpinus.LOJH01076532.1                      I 20 C 0
s Enhydra_lutris.KZ291749.1                              85878981 61 +  99434291 ------C-----TAA-G-GAGGCA-G------AG--ACAG----TGTT----CC-T-AC-CAGGATGGAGACAG-GA-----------------------TT---CT-----------GTGTA----CGCAC-A-A-------GA----
i Enhydra_lutris.KZ291749.1                             I 20 C 0
s Eptesicus_fuscus.JH977687.1                             4710531 70 +   6522550 T-----C-----TAA-G-GAGACA-GG----GAG--AAAG----CGTT----CC-C-AC-AAGAATGGAGACAG-TG-----------------------TT---CT-----------GTGTA----Ctcat-a-ag-gaagaga----
i Eptesicus_fuscus.JH977687.1                           I 19 I 1
s Equus_asinus.JREZ01000062.1                             5857906 62 -   7175178 T-----C-----TGA-G-GAGACA-G------AA--ACAA----TGGT----CC-C-AC-CAGGACGAAGACAG-TA-----------------------TT---CT-----------GTGTA----CTtac-a-a-------ga----
i Equus_asinus.JREZ01000062.1                           C 0 I 7
s Equus_caballus.CM000402.2                              13356392 62 +  41866177 T-----C-----TGA-G-GAGACA-G------AG--ACAA----TGGT----CC-C-AC-CAGGACGAAGACAG-TA-----------------------TT---CT-----------GTGTA----CTtac-a-a-------ga----
i Equus_caballus.CM000402.2                             C 0 I 7
s Equus_przewalskii.ATBW01073585.1                          17882 62 +     92910 T-----C-----TGA-G-GAGACA-G------AG--ACAA----TGGT----CC-C-AC-CAGGACGAAGACAG-TA-----------------------TT---CT-----------GTGTA----CTtac-a-a-------ga----
i Equus_przewalskii.ATBW01073585.1                      C 0 I 7
s Erinaceus_europaeus.JH835290.1                         11543060 64 +  16010500 T-----C-----TCA-G-AATGCA-GA----GAG--ACAG----TGTCTCACCC-C-AT-CAGCATGGAGACAG-CA-----------------------CT---CT-----------GGGGT----CGCAG-----------------
i Erinaceus_europaeus.JH835290.1                        C 0 I 5
s Erythrocebus_patas.Contig8                             48781531 65 -  48907691 T-----C-----T-----GAGACA-GA----GAG--ACAG----TGTT----GC-A-AT-CAAGACGATGACAA-TA-----------------------TT---CT-----------GTGCA----CACAA-A-G-------GTAGAG
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          320408 67 +    330699 T-----C-----TAA-G-GAGACA-GA----GAG--GCAG----TGTT----CC-C-AG-CAGAATGGAGACAG-TA-----------------------TTCTTCT-----------GTGTA----CTCAT-A-A-------GG----
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 I 1
s Eubalaena_japonica.EubJap_flattened_line_7756             66864 67 +     89355 T-----C-----TAA-G-GAGACA-GA----GAG--GCAG----TGTT----CC-C-AC-CAGAATGGAGACAG-TA-----------------------TTCTTCT-----------GTGTA----CTCAT-A-A-------GG----
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 I 1
s Eulemur_albifrons.k141_715837                              9955 51 +     13586 --------------------------------AG--AC------TGTT----CC-C-AT-CAAGACAGGGACAG-TA-----------------------TC---CT-----------GTGAG----CACAT-T-A-------GGAGGG
i Eulemur_albifrons.k141_715837                         I 8 I 3
s Eulemur_collaris.k141_1015201                              3214 51 -      4292 --------------------------------AG--AC------TGTT----CC-C-AT-CAAGACAGGGACAG-TA-----------------------TC---CT-----------GTGAG----CACAT-T-A-------GGAGGG
i Eulemur_collaris.k141_1015201                         I 8 I 1
s Eulemur_coronatus.k141_3240342                            16351 51 +     36558 --------------------------------AG--AC------TGTT----CC-C-AT-CAAGACAGGGACAG-TA-----------------------TC---CT-----------GTGAG----CACAT-T-A-------GGAGGG
i Eulemur_coronatus.k141_3240342                        I 8 I 1
s Eulemur_flavifrons.k141_903901                            12673 51 +     60246 --------------------------------AG--AC------TGTT----CC-C-AT-CAAGACAGGGACAG-TA-----------------------TC---CT-----------GTGAG----CACAT-T-A-------GGAGGG
i Eulemur_flavifrons.k141_903901                        I 8 I 1
s Eulemur_fulvus.k141_653297                                16158 51 +    109717 --------------------------------AG--AC------TGTT----CC-C-AT-CAAGACAGGGACAG-TA-----------------------TC---CT-----------GTGAG----CACAT-T-A-------GGAGGG
i Eulemur_fulvus.k141_653297                            I 8 I 1
s Eulemur_macaco.k141_747087                                 4141 51 -     19505 --------------------------------AG--AC------TGTT----CC-C-AT-CAAGACAGGGACAG-TA-----------------------TC---CT-----------GTGAG----CACAT-T-A-------GGAGGG
i Eulemur_macaco.k141_747087                            I 8 I 1
s Eulemur_mongoz.k141_825972                                20816 51 +     27497 --------------------------------AG--AC------TGTT----CC-C-AT-CAAGACAGGGACAG-TA-----------------------TC---CT-----------GTGAG----CACAT-T-A-------GGAGGG
i Eulemur_mongoz.k141_825972                            I 8 I 1
s Eulemur_rubriventer.k141_411740                           23272 51 +     26808 --------------------------------AG--AC------TGTT----CC-C-AT-CAAGACAGGGACAG-TA-----------------------TC---CT-----------GTGAG----CACAT-T-A-------GGAGGG
i Eulemur_rubriventer.k141_411740                       I 8 I 1
s Eulemur_rufus.k141_1620292                                38004 51 +     46535 --------------------------------AG--AC------TGTT----CC-C-AT-CAAGACAGGGACAG-TA-----------------------TC---CT-----------GTGAG----CACAT-T-A-------GGAGGG
i Eulemur_rufus.k141_1620292                            I 8 I 1
s Eulemur_sanfordi.k141_186399                              20745 51 -     29447 --------------------------------AG--AC------TGTT----CC-C-AT-CAAGACAGGGACAG-TA-----------------------TC---CT-----------GTGAG----CACAT-T-A-------GGAGGG
i Eulemur_sanfordi.k141_186399                          I 8 I 1
s Felis_catus.CM001386.2                                129900462 58 - 159252932 ------g-----t--ag-gagaca-ga----cag--acag----tgtt----cC-C-GC-CCAGATA----TAG-TA-----------------------TT---CT-----------GTGTA----CACTT-A-A-------GA----
i Felis_catus.CM001386.2                                I 990 I 260
s Felis_catus_fca126.CM031420.1                         129287452 43 - 158578461 --------------------------------------------TGTT----CC-C-GC-CCAGATAGAGATAG-TA-----------------------TT---CT-----------GTGTA----CACTT-A-A-------GA----
i Felis_catus_fca126.CM031420.1                         I 15 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 28540 58 +     52776 ------G-----TA--G-GAGACA-GA----CAG--ACAG----TGTT----CC-C-GC-CCAGAT----ATAG-TA-----------------------TT---CT-----------GTGTA----CACTT-A-A-------GA----
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13896834 67 -  19261668 T-----T-----TAA-G-G-GACC-AG----GCG--ATAG----TATT----CC-A-AC-AGTAATGGAGACAG-TA-----------------------TT---CT-----------GTGCA----CAcat-g-a-------ggaggg
i Fukomys_damarensis.KN123630.1                         I 24 C 0
s Galago_moholi.ctg555                                     215987 65 -    847004 T-----C-----T-----GAGATG-GA----AAG--ACAG----TGTT----CC-T-AG-TAAGGTGGGGACAA-TA-----------------------TT---CT-----------GTGAG----CAGAT-A-C-------AGGGAG
i Galago_moholi.ctg555                                  C 0 I 1
s Galago_senegalensis.k141_964197                           18348 65 -     43889 T-----C-----T-----GAGATG-GA----AAG--ACAG----TGTT----CC-T-AG-TAAGATGGGGACAA-TA-----------------------TT---CT-----------GTGAG----CAGAT-A-C-------AGGGAG
i Galago_senegalensis.k141_964197                       C 0 I 1
s Galagoides_demidoff.k141_1769638                          15490 65 +     27357 T-----C-----T-----GAGATG-GA----AAG--ACAG----TGTT----CC-T-AT-TAAGGTGGGGACAG-TA-----------------------TT---CT-----------GTGAG----CAGCT-A-A-------GGGGAG
i Galagoides_demidoff.k141_1769638                      C 0 I 1
s Galeopterus_variegatus.GalVar_scaffold_354               160263 63 +    324696 T-----C-----T-----GAGACA-GG------G--ACAG----TGTT----CT-G-AC-TGCAATTGAGACAG-CA-----------------------TC---CT-----------ATGCA----AACAC-A-A-------GGAGGG
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    187873 64 -    189561 T-----C-----TGA-A-GAGACA-GA----GAG--GCAG----TGTT----CC-C-AT-CAGATTGGAGACAG-TA-----------------------TT---CT-----------GTGTA----CTCAT-T-A-------GC----
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 I 1
s Glis_glis.GliGli_scaffold_79770                           17158 68 -     18683 T-----C-----TAA-T-GAGACA-GA------GACACAG----TGTG----CC-C-AC-AGGGATAGAGACAG-TA-----------------------TT---CT-----------GTGCC----CACAT-A-A-------GGAGAG
i Glis_glis.GliGli_scaffold_79770                       I 24 C 0
s Gorilla_beringei.k141_111300                               9947 65 -     14630 T-----C-----T-----GAGAAA-GA----CAG--ACAG----TGTT----CC-A-AT-CAAGACAATGACAG-TA-----------------------TT---CT-----------GTGCA----CACAT-A-G-------GAAGGG
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119657047 65 - 195582420 T-----C-----T-----GAGAAA-GA----CAG--ACAG----TGTT----CC-A-AT-CAAGACAATGACAG-TA-----------------------TT---CT-----------GTGCA----CACat-a-g-------gaaggg
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   80472 67 +    118900 T-----C-----T-----GAGACA-GC----TAGACACAG----TGTG----AC-C-AC-AGGGATGGAGACAG-TG-----------------------TT---CT-----------GTGCA----CATAT-A-A-------GGAGAG
i Graphiurus_murinus.GraMur_scaffold_4493               I 23 I 4
s Hapalemur_alaotrensis.k141_1280836                         6736 63 +     10286 T-----C-----T-----GAAACA-GA----AAG--AC------TGTT----CC-C-AT-CAAGACAGGGACAG-TA-----------------------TT---CT-----------GTGAG----CACAT-T-A-------GGAGGA
i Hapalemur_alaotrensis.k141_1280836                    C 0 I 1
s Hapalemur_gilberti.k141_279011                             5214 63 -     11661 T-----C-----T-----GAAACA-GA----AAG--AC------TGTT----CC-C-AT-CAAGACAGGGACAG-TA-----------------------TT---CT-----------GTGAG----CACAT-T-A-------GGAGGA
i Hapalemur_gilberti.k141_279011                        C 0 I 1
s Hapalemur_griseus.k141_1387522                            10541 63 +     56096 T-----C-----T-----GAAACA-GA----AAG--AC------TGTT----CC-C-AT-CAAGACAGGGACAG-TA-----------------------TT---CT-----------GTGAG----CACAT-T-A-------GGAGGA
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        33790 63 -     42470 T-----C-----T-----GAAACA-GA----AAG--AC------TGTT----CC-C-AT-CAAGACAGGGACAG-TA-----------------------TT---CT-----------GTGAG----CACAT-T-A-------GGAGGA
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        50413 63 -     54384 T-----C-----T-----GAAACA-GA----AAG--AC------TGTT----CC-C-AT-CAAGACAGGGACAG-TA-----------------------TT---CT-----------GTGAG----CACAT-T-A-------GGGGGA
i Hapalemur_occidentalis.k141_797938                    C 0 I 1
s Helogale_parvula.HelPar_flattened_line_22962              24171 62 +     53719 ------C-----TAA-G-AAGAC--GA----GAG--ACAG----TGTT----CC-C-AC-TTGGATGGAGACAG-TA-----------------------TT---CT-----------GTGTA----CACAT-A-A-------GA----
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                35003 64 -     91191 T-----C-----TAA-A-GAGCCA-GA----GAG--GCAG----TGTT----CC-C-AT-CAGATTGGAGACAG-TC-----------------------TT---CT-----------GCGTA----CTCAT-T-A-------GG----
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 I 1
s Heterocephalus_glaber.JH602058.1                        2561331 67 +  31725842 T-----T-----TAA-G-G-GACA-GG----GAG--ACAG----TGTT----CC-A-AC-AGCAATGGCAACAG-TA-----------------------TT---CT-----------GTACA----CGcat-g-a-------ggaggg
i Heterocephalus_glaber.JH602058.1                      I 24 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               63561 68 +     73687 T-----C-----TAA-G-AAGGCA-GA----CAG--ACAG----TGTT----CC-A-AT-TCGGATGGAGACAG-TC-----------------------TT---CT-----------TCCCA----TACGT-A-A-------CAAAGG
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              152216 64 +    277961 T-----C-----TAA-G-GAGACA-GA----GAG--GCAG----TGTT----CC-C-AT-CAGAATGGAGACAG-TA-----------------------TT---CT-----------GTGTA----CTCAT-A-A-------GG----
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 I 1
s Hipposideros_armiger.JXIK01001085.1                      285255 70 -    477199 C-----C-----TAA-G-GAGACA-AG----CAG--AAAG----TGTT----CC-C-AT-CAGAATGGAGACAG-TA-----------------------TT---CT-----------CTGTA----Ctcat-a-ag-gaagaga----
i Hipposideros_armiger.JXIK01001085.1                   C 0 I 1
s Hipposideros_galeritus.HipGal_scaffold_52959               2941 70 +     26078 C-----C-----TAA-G-GAGACA-AG----CAG--AAAG----TGTT----CC-C-AT-CAGAATGGAGACAG-TA-----------------------TT---TT-----------CTGTA----CTCAT-A-AG-GAAGAGA----
i Hipposideros_galeritus.HipGal_scaffold_52959          C 0 I 1
s Hoolock_leuconedys.ctg79                                      9858 65 -   7690867 T-----C-----T-----GAGACA-GA----GAG--ACAG----TGTT----CC-A-AT-CAAGACAGTGACAG-TA-----------------------TT---CT-----------GTGCA----CACAT-A-G-------GAAGGG
i Hoolock_leuconedys.ctg79                                 I 52 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 24610 62 -     67322 ------C-----TAA-G-AAGACA-GA----GAG--ACAG----TGTT----CC-C-AC--CGGATGGAGACAC-TA-----------------------TT---GT-----------GTGTA----CACAT-A-A-------GA----
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           21926 39 -    119109 T-----C-----TAA-G-G-GTTA-GA----GAG--ATAA----TGTC----CC-A-GC-AGGGATGGAG-------------------------------------------------------------------------------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       I 21 I 8
s Hylobates_abbotti.k141_1816750                             2429 65 +      3202 T-----C-----T-----GAGACA-GA----GAG--ATAG----TGTT----CC-A-AT-CAAGACAGTGACAG-TA-----------------------TT---CT-----------GTGCA----CACAT-A-G-------GAAGGG
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1136966                               438 65 +      9785 T-----C-----T-----GAGACA-GA----GAG--ACAG----TGTT----CC-A-GT-CAAGACAGTGACAG-TA-----------------------TT---CT-----------GTGCA----CACAT-A-G-------GAAGGG
i Hylobates_agilis.k141_1136966                         C 0 C 0
s Hylobates_klossii.k141_468230                              3918 65 +      5464 T-----C-----T-----GAGACA-GA----GAG--ACAG----TGTT----CC-A-AT-CAAGACAGTGACAG-TA-----------------------TT---CT-----------GTGCA----CACAT-A-G-------GAAGGG
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14629264 65 -  25970782 T-----C-----T-----GAGACA-GA----GAG--ACAG----TGTT----CC-A-AT-CAAGACAGTGACAG-TA-----------------------TT---CT-----------GTGCA----CACAT-A-G-------GAAGGG
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            1816 65 +      4161 T-----C-----T-----GAGACA-GA----GAG--ACAG----TGTT----CC-A-AT-CAAGACAGTGACAG-TA-----------------------TT---CT-----------GTGCA----CACAT-A-G-------GAAGGG
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                    10223 67 +     22540 T-----C-----TAA-G-G-GACA-GA----GAA--ACAA----TGTT----GC-A-GC-AGGAATGGAGACAG-TA-----------------------TT---CT-----------ATGGA----CACTG-G-A-------GGAAGG
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7131072 51 +  13083262 ------------------------------------ACAC----TGTG----CC-A-AG-AGGAATGGAGACAG-TA-----------------------TT---CT-----------GTGAA----CACAT-A-A-------GAAGGG
i Ictidomys_tridecemlineatus.JH393315.1                 I 15 C 0
s Indri_indri.k141_2197838                                   2289 47 +      3484 --------------------------------------------TGTT----CC-C-AT-CAAGATGGGGACAG-TA-----------------------TT---CT-----------GTGAG----AACAT-A-A-------GGACAG
i Indri_indri.k141_2197838                              I 14 I 1
s Inia_geoffrensis.IniGeo_flattened_line_66725              14385 67 +     17520 T-----C-----TAA-G-GAGACA-GA----GAG--GCAG----TGTT----CC-C-AC-CAGAATGGAGACAG-TA-----------------------TACTTCC-----------GTGTA----CTCAT-A-A-------GG----
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 I 1
s Jaculus_jaculus.JH725517.1                              8579851 68 +  11848649 T-----C-----TA-TG-GTGACA-GA----GAG--GCAG----CAtt----ca-g-gc-agggctggagacag-TA-----------------------TT---CA-----------GAGTA----CACac-a-a-------gaataa
i Jaculus_jaculus.JH725517.1                            I 25 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               29009 62 +     37189 T-----C-----TAA-G-GAGACA-G------AG--GCAG----TGTT----CC-C-AC-CAGAACAGAGACAG-TA-----------------------TT---CT-----------GTGTA----CTCAT-A-A-------GG----
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 I 1
s Lagothrix_lagothricha.k141_12968                          54715 65 -    147782 T-----C-----T-----GAGACA-GA----GAG--ACAG----TATT----CC-G-AT-CAAGATGATGACAG-TA-----------------------TT---CT-----------GTACA----CACAT-T-G-------GGAGGG
i Lagothrix_lagothricha.k141_12968                      I 18 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    7098 40 +     26176 ------------TAA-G-GAGACC-AG----GAG--AAAG----TATT----CC-C-AC-AAGAATGAAGAC-----------------------------------------------------------------------------
i Lasiurus_borealis.LasBor_scaffold_59542               I 19 I 24
s Lemur_catta.scaffold_1                                258412091 63 - 285822530 T-----C-----T-----GAAACA-GA----AAG--AC------TGTT----CC-C-AT-CAAGACAGGGACAG-TA-----------------------TT---CT-----------GTGAG----CACAT-T-A-------GGAGGA
i Lemur_catta.scaffold_1                                C 0 I 1
s Lepilemur_ankaranensis.k141_884009                        29413 65 +     39228 T-----C-----T-----GAGCTA-GA----AAG--A----CAGTGTT----CC-C-TT-CAAGATGAGGACAG-TA-----------------------TT---CT-----------GTGAG----CACAT-A-A-------GGAGGG
i Lepilemur_ankaranensis.k141_884009                    C 0 I 1
s Lepilemur_dorsalis.k141_134267                            58777 65 +     63517 T-----C-----T-----GAGCTA-GA----AAG--A----CAGTGTT----CC-C-TT-CAAGATGAGGACAC-TA-----------------------TT---CT-----------GTGAG----CACAT-A-A-------GGAGGG
i Lepilemur_dorsalis.k141_134267                        C 0 I 1
s Lepilemur_ruficaudatus.k141_574529                        37157 67 -     38897 T-----C-----T-----GAGCTA-GA----AAG--AG--ATAGTGTT----CC-C-TT-CAAGATGAGGACAG-TA-----------------------TT---CT-----------GTGAG----CACAT-A-A-------GGAGGG
i Lepilemur_ruficaudatus.k141_574529                    C 0 I 1
s Lepilemur_septentrionalis.k141_710646                      3203 65 -     13103 T-----C-----T-----GAGCTA-GA----AAG--A----CAGTGTT----CC-C-TT-CAAGATGAGGACAG-TA-----------------------TT---CT-----------GTGAG----CACAT-A-A-------GGAGGG
i Lepilemur_septentrionalis.k141_710646                 C 0 I 1
s Leptonychotes_weddellii.KB714749.1                      3092924 63 -   3498232 ------c-----t-aag-gagaca-ga----gag--acag----tgtt----AC-T-AC-CAGGATGGAGACAG-TA-----------------------TT---CT-----------GTATA----CACAC-A-A-------GA----
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    21685 75 +     22452 T-----C-----TA-GG-GAGACG-GAGACAGAGACACAG----CATT----CC-G-ACCAGGAGTAGAGACAA-GG-----------------------CT---CT-----------GTGCA----CACAT-A-A-------GGAGGG
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            141328 66 +   3060487 T-----C-----TAA-G-GAGACA-GA----GAG--GCAG----TGTT----CC-CAAC-CAGAATGGAGACAG-TA-----------------------TTCTTCC-----------ATGTA----CTCAT-A-A-------------
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19253152 65 +  19376315 T-----C-----T-----GAGACA-GA----GAG--ACAG----TGTT----GC-A-AT-CAAGACGATTACAA-TA-----------------------TT---CT-----------GTGCA----CACAT-A-G-------GAAGGG
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           15950 65 +     84689 T-----C-----C-----GAGACA-GA----AAG--ACAG----TGTT----CC-T-AT-TCAGATGGGGACAA-TA-----------------------TT---CT-----------CTGAG----CAGAT-A-A-------GGGGAG
i Loris_lydekkerianus.k141_550999                       C 0 I 1
s Loris_tardigradus.ctg97                                 3783688 64 +   6799190 T-----C-----C-----GAGACA-GA----AAG--ACAG----TGTT----CC-T-AT-TCAGATGGGGACAA-TA-----------------------TT---CT-----------CTTAG----CAGAT-A-A-------GGGGA-
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20599484 65 -  62548349 T-----C-----CAA-G-AAGACA-GG----GAG--AC------TGTT----CT-G-AC-CAGGATGGAGACAG-TA-----------------------TT---CT-----------TTCCA----TA-GT-A-A-------CAACGG
i Loxodonta_africana.GL010040.1                         I 20 C 0
s Lycaon_pictus.CM007556.1                               11096689 46 +  39895028 ------c-----t-aag-gagaca-ga----gag--acag----tgtT----CC-T-AC-CAGGATGGAGACAG-CA-----------------------T------------------------------------------------
i Lycaon_pictus.CM007556.1                              C 0 I 11
s Macaca_arctoides.k141_2201161                             24901 65 +     74745 T-----C-----T-----GAGACA-GA----CAG--ACAG----TGTT----GC-A-GT-CAAGACGATTACAA-TA-----------------------TT---CT-----------GTGCA----CACAT-A-G-------GAAGGG
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12711364 65 +  12821369 T-----C-----T-----GAGACA-GA----GAG--ACGG----TGTT----GC-A-GG-CAAGACGATTACAA-TA-----------------------TT---CT-----------GTGCG----CACAT-A-G-------GAAGGG
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                3937 65 -     26467 T-----C-----T-----GAGACA-GA----GAG--ACGG----TGTT----GC-A-GT-CAAGACGATTACAA-TA-----------------------TT---CT-----------GTGCG----CACAT-A-G-------GAAGGG
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           51808 65 +     63263 T-----C-----T-----GAGACA-GA----GAG--ACGG----TGTT----GC-A-GG-CAAGACGATTACAA-TA-----------------------TT---CT-----------GTGCG----CACAT-A-G-------GAAGGG
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 3918 65 -     26361 T-----C-----T-----GAGACA-GA----GAG--ACGG----TGTT----GC-A-GT-CAAGATGATTACAA-TA-----------------------TT---CT-----------GTGCG----CACAT-A-G-------GAAGGG
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_467472                                 7108 65 -      7381 T-----C-----T-----GAGACA-GA----GAG--ACGG----TGTT----GC-A-GT-CAAGACGATTACAA-CA-----------------------TT---CT-----------GTGCG----CACAT-A-G-------GAAGGG
i Macaca_leonina.k141_467472                            C 0 C 0
s Macaca_maura.k141_251854                                  50337 65 -     79256 T-----C-----T-----GAGGCA-GA----GAG--ACAG----TGTT----GC-A-GT-CAAGACGATTACAA-TA-----------------------TT---CT-----------GTGCG----CACAT-A-G-------GAAGGG
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196040435 65 + 196197964 T-----C-----T-----GAGACA-GA----GAG--ACGG----TGTT----GC-A-GT-CAAGACGATTACAA-TA-----------------------TT---CT-----------GTGCG----CAcat-a-g-------gaaggg
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11450605 65 +  11645122 T-----C-----T-----GAGACA-GA----GAG--ACGG----TGTT----GC-A-GT-CAAGACGATTACAA-TA-----------------------TT---CT-----------GTGCG----CAcat-a-g-------gaaggg
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   9291 65 -     46448 T-----C-----T-----GAGACA-GA----GAG--ACAG----TGTT----GC-A-GT-CAAGACGATTACAA-TA-----------------------TT---CT-----------GTGCG----CACAT-A-G-------GAAGGG
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                6952 65 -     13212 T-----C-----T-----GAGACA-GA----CAG--ACAG----TGTT----GC-A-AT-CAAGATGATTACAA-TA-----------------------TT---CT-----------GTGCG----CACAT-A-G-------GAAGGG
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 20634 65 -     55006 T-----C-----T-----GAGACA-GA----GAG--ACAG----TGTT----GC-A-GT-CAAGACGATTACAA-TA-----------------------TT---CT-----------GTGCG----CACAT-A-G-------GAAGGG
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43845749 65 +  43892939 T-----C-----T-----GAGACA-GA----GAG--ACGG----TGTT----GC-A-GT-CAAGACGATTACAA-CA-----------------------TT---CT-----------GTGCG----CACAT-A-G-------GAAGGG
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               21918 65 -     24607 T-----C-----T-----GAGACA-GA----GAG--ACGG----TGTT----GC-A-GG-CAAGACGATTACAA-TA-----------------------TT---CT-----------GTGCG----CACAT-A-G-------GAAGGG
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               9288 65 -     27140 T-----C-----T-----GAGACA-GA----GAG--ACAG----CGTT----GC-A-GT-CAAGACGATTACAA-TA-----------------------TT---CT-----------GTGCG----CACAG-A-G-------GAAGGG
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                703405 70 +    802869 T-----C-----TAA-G-GAGATG-GA----GAG--AAAG----TGTT----CC-C-AC-CAGAATGGAGACAG-TA-----------------------TG---TT-----------GTGTA----CTCAC-A-AG-GAAGAGA----
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 I 68
s Mandrillus_leucophaeus.scaffold125                     43442324 65 -  43563597 T-----C-----T-----GAGACA-GA----GAG--ACAG----TGTT----GC-A-AT-CAAGACGATTACAA-TA-----------------------TT---CT-----------GTGCA----CACAT-A-G-------GAAGGG
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4455127 65 -   4543643 T-----C-----T-----GAGACA-GA----GAG--ACAG----TGTT----GC-A-AT-CAAGACGATTACAA-TA-----------------------TT---CT-----------GTGCA----CACAT-A-G-------GAAGGG
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            153691 29 +    252755 T-----C-----TTA-A-GAGACA-GA----GAG--A--------GTT----CA-T-AC-CAG--------------------------------------------------------------------------------------
i Manis_javanica.JSZB01003966.1                         C 0 I 20
s Manis_pentadactyla.KN017078.1                             41289 28 +     58827 t-----c-----t--aa-gagaca-ga----gag--a--------gtt----CA-T-AC-CAG--------------------------------------------------------------------------------------
i Manis_pentadactyla.KN017078.1                         C 0 I 20
s Marmota_marmota.CZRN01000005.1                         36878939 51 +  64221397 ------------------------------------ACAC----TGTG----CC-A-AG-AGGAATGGAGACAG-TA-----------------------TT---CT-----------GTGAA----CACAT-A-A-------GGAGGG
i Marmota_marmota.CZRN01000005.1                        I 15 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       67182 69 -    234502 T-----C-----TA-GG-GGGACA-GG----GAG--GCAG----TGT-----CC-C-AC-CAGAATGGAGACAG-TT-----------------------GT---CT-----------GTGCA----TTCAG-A-AGAGA-GAGA----
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 I 1
s Mellivora_capensis.MelCap_flattened_line_15433             8074 65 -     87323 ------G-----TAA-G-GAGGCA-G------AG--ACAG----TGTT----CC-T-AC-CAGGATGGAGACAG-TA-----------------------TT---CT-----------GTGTACATACGCAC-A-A-------GG----
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 2907 68 +    115071 A-----CCAGTCTA-TT-GA-AGAGAA----GA------G----TGCT----AC-A-AC-AAGGCTGGAGGCAG-TG-----------------------TT---CT-----------GGGCA----CACAC-A-A-------GAA-GG
i Meriones_unguiculatus.MerUng_scaffold_9483            I 20 C 0
s Mesocricetus_auratus.KB708139.1                         1052509 58 -  26018355 T-----T-----TCTC--GG--AA-CT----GA------G----TGTT----TG-A-AC-AGGGCAGGAGGTGG-TA-----------------------CT---CA-----------AGGCA----CACAG-A-A-------GA----
i Mesocricetus_auratus.KB708139.1                       I 23 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    3979 67 -     12939 T-----C-----TAA-G-GAGACA-GA----GAG--GCAG----TATT----CG-C-AG-CAGAATGGAGACAG-TA-----------------------TTCTTCT-----------GTGTA----CTCAT-A-A-------GG----
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 I 1
s Microcebus_murinus.CM007691.1                          16515138 64 +  47401472 T-----C-----T-----GAGACA-GA----AAG--A----CAGGGTT----CC-C-TT-CAAGATGGGGATAG-TA-----------------------TT---CT-----------GTGAG----GATTT-A-A-------G-AGGA
i Microcebus_murinus.CM007691.1                         C 0 I 1
s Microgale_talazaci.MicTal_scaffold_34660                  42171 37 -     48017 ------------------AAGACA-AG----GAG--ACAG----TGTT----CT-A-AC-AAAGATGAAGGTA----------------------------------------------------------------------------
i Microgale_talazaci.MicTal_scaffold_34660              I 2 I 24
s Micronycteris_hirsuta.MicHir_scaffold_37978               26504 70 -     32043 T-----C-----TAA-G-GAGACA-GG----AAG--GAAG----TGTT----TC-C-AA-CACAGTGGAGACAG-AG-----------------------TT---CT-----------GTGTA----CTCAT-A-AG-GAAGAGA----
i Micronycteris_hirsuta.MicHir_scaffold_37978           I 19 C 0
s Microtus_ochrogaster.CM001673.1                        22825503 54 -  98408828 T-----C-----T-GGG-GA--CA-CA----GA------G----TATT-----T-A-AC-AGGACAGAAGGTGG-TA-----------------------TC---CA-----------GGGCA----CATAg-a---------------
i Microtus_ochrogaster.CM001673.1                       I 20 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8214852 70 +  10048721 t-----c-----c-aca-gagaca-gg----gag--aaag----tGTT----CC-C-AC-CAGAATGGAGACAG-TG-----------------------TT---CT-----------GCGCA----CTCAT-A-AG-GAAGAGA----
i Miniopterus_natalensis.LDJU01000022.1                 I 19 I 1
s Miniopterus_schreibersii.MinSch_scaffold_24116            39310 70 +     45743 T-----C-----TA-CA-GAGACA-GG----GAG--AAAG----TGTT----CC-C-AC-CAGAATGGAGACAG-TG-----------------------TT---CT-----------GCACA----CTCGT-A-AG-GAAGAGA----
i Miniopterus_schreibersii.MinSch_scaffold_24116        I 19 I 1
s Miopithecus_ogouensis.k141_2935907                         6870 65 +     29742 T-----C-----T-----GAGACA-GA----GAG--ACAG----TGTT----GC-A-AT-CAAGACGATGACAA-TA-----------------------TT---CT-----------GTGCA----CACAT-A-G-------GAAGGG
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        18420 63 -    104932 ------C-----TAA-G-GAGACA-GA----GAG--ACAG----TGTT----AC-T-AC-CAGGATGGAGACAG-TA-----------------------TT---CT-----------GTGTA----CACAC-A-A-------GA----
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     5822 65 -     12809 T-----C-----T-----GAGACA-GA----AAG--A----CAGGGTT----CC-C-TT-CAAGATGGGGATAG-TA-----------------------TT---CT-----------GTGAG----CACTT-A-A-------GGAGGA
i Mirza_zaza.k141_593947                                C 0 I 1
s Monodon_monoceros.MonMon_M_scaffold_5598                 151754 67 +    154973 T-----C-----TAA-G-GAGACA-GA----CAG--GCAG----TGCT----CC-C-AC-GAGAATGGAGACAG-TA-----------------------TTCTTCC-----------GTGTA----CTCAT-A-A-------GG----
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 I 1
s Mormoops_blainvillei.MorMeg_scaffold_2952                165020 70 +    265003 T-----C-----TAA-G-GGGACA-GA----GAG--AAAG----TGTT----TC-C-AC-CAGAAGGGAGACAG-TG-----------------------TT---CT-----------GGGTA----CTCGG-A-AG-GAAGAGA----
i Mormoops_blainvillei.MorMeg_scaffold_2952             I 19 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  8552 64 -     19904 T-----C-----TAA-A-GAGACA-GA----GAG--GCAG----TGTT----TC-C-AT-CAGATTGGAGACAG-TA-----------------------TT---CT-----------GTGTA----CTCAT-T-A-------GG----
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 I 1
s Mungos_mungo.MunMun_flattened_line_8729                  151910 63 -    168139 ------C-----TAA-G-AAGATA-GA----GAG--ACAG----TGTT----CC-C-AC-CTGGATGGAGACAG-TA-----------------------TT---CT-----------GTGTA----CACAT-A-A-------GA----
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          25840 76 -    100666 TCTACAC-----AAACC-TACACA-GG----GAG--AAAG----TGTT----CC-C-AC-AAGAATGGAGACAG-TG-----------------------TT---CT-----------GTGTA----CTCAT-G-AG-TAAAAGA----
i Murina_feae.MurFea_scaffold_2254                      I 19 I 1
s Mus_caroli.LT608236.1                                  70772743 67 +  92629107 T-----CTAGTCTA-TG-GG-ATA-AA----GA------G----TGTT----TG-A-AG-AAAACTAGGGGTAT-GG-----------------------TT---CA-----------GGGTG----cacac-a-a-------gaa-gg
i Mus_caroli.LT608236.1                                 I 25 C 0
s Mus_musculus.chr16                                     75494795 67 +  98207768 T-----CTAGTCTA-TG-GG-ATA-AA----GA------G----TGTT----TG-A-AG-AAAACTAGGGGTAT-GG-----------------------TT---CA-----------GGGTG----Cacac-a-a-------gaa-gg
i Mus_musculus.chr16                                    I 25 C 0
s Mus_pahari.LT608305.1                                  67561547 67 +  89017189 T-----CTAGTCTA-TG-GG-ATA-AA----GA------G----TGTT----TG-A-AG-AGAGCTGGGGATAC-CG-----------------------TT---CA-----------GGGtg----cacac-a-g-------gaa-gg
i Mus_pahari.LT608305.1                                 I 25 C 0
s Mus_spretus.CM004110.1                                 74337518 67 +  97876770 T-----CTAGTCTA-TG-GG-ATA-AA----GA------G----TGTT----TG-A-AG-AAAACTAGGGGTAT-GG-----------------------TT---CA-----------GGGTG----cacac-a-a-------gaa-gg
i Mus_spretus.CM004110.1                                I 25 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             15565 70 +     98495 C-----C-----TAA-T-GAGACA-GA----AAAACACAG----TGTG----CC-C-GC-AGGGATGGAGACAG-TG-----------------------TT---CT-----------GTGCA----CACAT-A-A-------GGAGAG
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 24 C 0
s Mustela_putorius.JH417978.1                             4430179 61 -  28371801 ------C-----TAA-G-GAGGCA-G------AG--ACAG----TGTT----CC-T-AC-CACGATGGAGACAG-GA-----------------------TT---CT-----------GTGTA----TGCAC-A-A-------GA----
i Mustela_putorius.JH417978.1                           I 17 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     96325 66 -    117718 T-----C-----TAA-A-G-GACA-GG----GAG--TCAG----GGTT----CC-A-GT-GGGGATGGAGACAG-CA-----------------------TT---CT-----------ATGC-----CACAT-G-A-------GGCAGG
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 19 C 0
s Myotis_brandtii.KE161952.1                               972852 75 +   8389877 TCGAGTC-----TAA-G-GAGACA-GG----GAG--AAAG----CGTT----CC-C-AC-AAGAATGGAGACAG-TG-----------------------TT---CT-----------GTGTA----CTCat-a-ag-gaagaga----
i Myotis_brandtii.KE161952.1                            I 17 I 1
s Myotis_davidii.KB114863.1                               5023930 75 +   6462685 TCGAGTC-----TAA-G-GAGACA-GG----GAA--GAAG----CGTT----CC-C-AC-AAGAATGGAGACAG-TG-----------------------TT---CT-----------GTGTA----Ctcat-a-ag-gaagaga----
i Myotis_davidii.KB114863.1                             I 19 I 1
s Myotis_lucifugus.GL429887.1                             3470359 75 -   3747815 TCGAGTC-----TAA-G-GAGACA-GG----GAG--AAAG----CGTT----CC-C-AC-AAGAATGGAGACAG-TG-----------------------TT---CT-----------GTGTA----CTCat-a-ag-gaagaga----
i Myotis_lucifugus.GL429887.1                           I 19 I 1
s Myotis_myotis.MyoMyo_scaffold_6123                        15588 75 +     66751 TCGAGTC-----TAA-G-GAGACA-GG----GAG--AAAG----CGTT----CC-C-AC-AAGAATGGAGACAG-TG-----------------------TT---CT-----------GTGTA----CTCAT-A-AG-GAAGAGA----
i Myotis_myotis.MyoMyo_scaffold_6123                    I 19 I 1
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             8347 65 -      8794 T-----T-----TAA-G-GAGAAG--G----GAG--GCAA----TGTT----CT-G-AC-AG--ATCGAGACAA-TA-----------------------GT---CT-----------GTGCA----TACAT-C-A-------GAACAG
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            125254 38 +    362372 ---------------------------------------G----TGTT----CC-A-AC-AGGGTTGGAGAGAG-TA-----------------------TT---CT-----------GGGCA----CAG-------------------
i Nannospalax_galili.KL201303.1                         I 33 I 1
s Neomonachus_schauinslandi.NINY01007774.1                4491815 59 -  14209539 ------------------gagaca-ga----gag--acag----tgtt----AC-T-AC-CAGGATGGAGACAG-TA-----------------------TT---CT-----------GTGTA----CACAC-AAA-------GA----
i Neomonachus_schauinslandi.NINY01007774.1              I 2 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3956345 67 -   4490290 T-----C-----TAA-G-GAGACA-GA----GAG--GCAG----TGCT----CC-C-AC-CAGAATGGAGACAG-TA-----------------------TTCTTCC-----------GTGTA----CTCAT-A-A-------GG----
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 I 1
s Noctilio_leporinus.NocLep_scaffold_12062                  52334 70 +     94413 T-----C-----TAA-G-GAAACA-GG----GAG--GAAG----TGTT----GC-C-AC-CAGAATGGAGACAG-TA-----------------------TT---CT-----------GTGGG----CTCAG-A-AG-GAAGAGA----
i Noctilio_leporinus.NocLep_scaffold_12062              I 19 C 0
s Nomascus_annamensis.k141_762468                             935 65 -      2755 T-----C-----T-----GAGACA-GA----GAG--ACAG----TGTT----CC-A-AT-CAGGACAGTGACAG-TA-----------------------TT---CT-----------GTGCA----CACAT-A-G-------GAAGGG
i Nomascus_annamensis.k141_762468                       C 0 C 0
s Nomascus_concolor.k141_256540                              7547 65 -      8966 T-----C-----T-----GAGACA-GA----GAG--ACAG----TGTT----CC-A-AT-CAAGACAGTGACAG-TA-----------------------TT---CT-----------GTGCA----CACAT-A-G-------GAAGGG
i Nomascus_concolor.k141_256540                         C 0 I 9
s Nomascus_gabriellae.k141_1400361                           1521 30 -      2203 --------------------------------------------------------------------TGACAG-TA-----------------------TT---CT-----------GTGCA----CACAT-A-G-------GAAGTG
i Nomascus_gabriellae.k141_1400361                      I 35 C 0
s Nomascus_siki_b.tarseq_2374                            3174 65 +      8673 t-----c-----t-----gagaca-ga----gag--acag----tgtt----cc-a-at-caagacagtgacag-ta-----------------------tt---ct-----------gtgca----cacat-a-g-------gaaggg
i Nomascus_siki_b.tarseq_2374                       I 664 I 931
s Nomascus_siki_a.k141_421408                                  1400 65 +     16235 T-----C-----T-----GAGACA-GA----GAG--ACAG----TGTT----CC-A-AT-CAGGACAGTGACAG-TA-----------------------TT---CT-----------GTGCA----CACAT-A-G-------GAAGGG
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                39559 46 +   3668941 ------c-----t-aag-gagaca-ga----gag--acag----tgtC----CC-T-AC-CAGGATGGAGATAG-CA-----------------------C------------------------------------------------
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 I 11
s Nycticebus_bengalensis.LG16                            65572721 65 -  95554990 T-----C-----T-----GAGATG-GA----AAG--ACAG----TGTT----CC-T-AT-CCAGATGGGGACAA-TA-----------------------TT---CT-----------GTGAG----CAGAT-A-C-------GGGGAG
i Nycticebus_bengalensis.LG16                           C 0 I 1
s Nycticebus_coucang.k141_6040852                             358 65 +      1868 T-----C-----T-----GAGATG-GA----AAG--ACAG----TGTT----CC-T-AT-CCAGATGGGGACAA-TA-----------------------TT---CT-----------GTGAG----CAGAT-A-C-------GGGGAG
i Nycticebus_coucang.k141_6040852                       C 0 I 1
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65680906 65 +  89412551 T-----C-----T-----GAGATG-GA----AAG--ACAG----TGTT----CC-T-AT-CCAGATGGGGACAA-TA-----------------------TT---CT-----------GTGAG----CAGAT-A-C-------GGGGAG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 I 1
s Ochotona_princeps.JH802095.1                            5000782 49 -  23139505 ---------------------------------------T----CAGT----CC-A-AATAGGAATTGAGACAA-GA-----------------------TT---CT-----------GTGTA----CACAT-A-T-------GGAAAC
i Ochotona_princeps.JH802095.1                          I 21 C 0
s Octodon_degus.JH651621.1                                3691664 67 +  10294119 T-----C-----CA-CA-G-TACA-AG----GAG--TCGA----TGTT----CC-A-AC-AGGGATGGAGACAG-TG-----------------------TT---CT-----------GTGCC----CACAc-g-a-------ggagga
i Octodon_degus.JH651621.1                              I 21 C 0
s Odobenus_rosmarus.KB229369.1                             686513 61 -   3126709 ------c-----t-aag-gagaca-ga----gag--acag----tgtt----AC-T-AG-CAGGATGGAGACAG-TG-----------------------TT---CT-----------GTGTA----CACAC-A-A-------------
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1085530 64 +   1425656 T-----C-----TGA-A-CAGACA-GA----GAG--GCAG----TGTT----CC-C-AT-CAAACTGGAGACAG-TA-----------------------TT---CT-----------GCGTA----CTCAT-T-A-------GG----
i Odocoileus_virginianus.KZ101650.1                     C 0 I 1
s Okapia_johnstoni.LVCL01S0017931.1                         43596 64 +     78940 T-----C-----TGA-A-GAGACA-GA----GAG--GCAG----TGTT----CC-C-AT-CAGATTGGAGACAG-TA-----------------------TT---CT-----------GTGTA----CTCAT-T-A-------GG----
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 I 2
s Ondatra_zibethicus.OndZib_scaffold_6821                  131309 55 +    145789 T-----C-----T-GGG-GA--CA-CA----GA------G----TATT-----TGA-AC-AGGGCAGAAGGTGG-TA-----------------------TC---CA-----------GGGCA----CATAG-A---------------
i Ondatra_zibethicus.OndZib_scaffold_6821               I 24 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  44225 59 +     62360 T-----C-----T--CTTGGTTCA-GA----GA------A----TGTA----TG-A-AC-AGGGTG-AAGGTAG-CA-----------------------TA---GA-----------AGGCA----CACAC-A-A-------GA----
i Onychomys_torridus.OnyTor_scaffold_12578              I 24 C 0
s Orcinus_orca.KB316965.1                                 7230026 67 -   7562323 T-----C-----TAA-G-GAGACA-GA----GAG--GCAG----TGCT----CC-C-AC-CAGAATGGAGACAG-TA-----------------------TTCTTCC-----------ATGTA----CTCAT-A-A-------GG----
i Orcinus_orca.KB316965.1                               C 0 I 1
s Orycteropus_afer.OryAfe_flattened_line_13509              64883 62 -     66828 ------------------AAGATA-GG----GAG--ACAG----TGTT----CT-G-AC-CAAGATGGAGACAG-CT-----------------------TC---TT-----------TTACA----TATGT-A-A-------CAAGAG
i Orycteropus_afer.OryAfe_flattened_line_13509          I 2 C 0
s Oryctolagus_cuniculus.CM000803.1                      141884701 75 + 163896628 T-----C-----T-aag-gagacg-gagacagagacacag----catT----CC-G-ACCAGGAGTAGAGACAA-GG-----------------------TT---CT-----------GTGCA----CACTT-A-A-------GGAGGG
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      316696 46 -    505867 ------C-----TAA-G-GAAACA-GA----GAG--ACAG----TGTT----CC-T-AC-CAGGATGGAGATAG-CA-----------------------T------------------------------------------------
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 I 11
s Otolemur_crassicaudatus.k141_505435                        5849 65 -     53940 T-----C-----T-----GAGATG-GA----AAG--ACAG----TGTT----CC-T-AT-TAAGATGGGGACAA-TA-----------------------TT---CT-----------GTGAG----CAGCT-A-A-------GGGGAG
i Otolemur_crassicaudatus.k141_505435                   C 0 I 1
s Otolemur_garnettii.GL873528.1                          18013818 65 -  38779656 T-----C-----T-----GAGATG-GA----AAG--ACAG----TGTT----CC-T-AT-TAAGATGGGGACAA-TA-----------------------TT---CT-----------GTGAG----CAGct-a-a-------ggggag
i Otolemur_garnettii.GL873528.1                         C 0 I 1
s Ovis_aries.CM001582.2                                 134084788 62 - 275406953 T-----C-----TAA-A-GAGCCA-GA----GAG--GCAG----TGTT----CC-C-AT-CAGATTGGAGACAG-TC-----------------------TT---CT-----------GCGTA----CTCAT-T-A-------------
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      86026 64 +    140051 T-----C-----TAA-A-GAGTCA-GA----GAG--GCAG----TGTT----CC-C-AT-CAGATTGGAGACAG-TC-----------------------TT---CT-----------GCGTA----CTCAT-T-A-------GG----
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 I 1
s Pan_paniscus.KQ411703.1                                   19763 65 +     41252 T-----C-----T-----GAGAAA-GA----GAG--ACAG----TGTT----CC-A-AT-CAAGACGATGACAG-TA-----------------------TT---CT-----------GTGCA----CAcat-a-g-------gaaggg
i Pan_paniscus.KQ411703.1                               I 253 I 101
s Pan_troglodytes.NBAG03000771.1                           186185 65 +    210065 T-----C-----T-----GAGAAA-GA----GAG--ACAG----TGTT----CC-A-AT-CAAGACGATGACAG-TA-----------------------TT---CT-----------GTGCA----CAcat-a-g-------gaaggg
i Pan_troglodytes.NBAG03000771.1                        I 88 I 47
s Panthera_onca.PanOnc_flattened_line_1615                  41472 47 +    295523 ---------------------------------G--ACAG----TGTT----C--C-GC-CCAGATAGAGACAG-TA-----------------------TT---CT-----------GTGTA----CACTT-A-A-------GA----
i Panthera_onca.PanOnc_flattened_line_1615              I 10 C 0
s Panthera_pardus.KV860323.1                              3645288 47 +  18214204 ---------------------------------G--ACAG----TGTT----C--C-GC-CCAGATAGAGACAG-TA-----------------------TT---CT-----------GTGTA----CACTT-A-A-------GA----
i Panthera_pardus.KV860323.1                            I 10 C 0
s Panthera_tigris.KE721879.1                              5034927 45 -   6340057 -------------------------------------CAG----TGTT----C--C-GC-CCAGATAGAGACAG-TA-----------------------TT---CT-----------GTGTA----CACTT-A-A-------GA----
i Panthera_tigris.KE721879.1                            I 8 C 0
s Pantholops_hodgsonii.KE114631.1                         1073658 64 -   1292953 T-----C-----TAA-A-GAGTCA-GA----GAG--ACAG----TGTT----CC-C-AT-CAGATTGGAGACAG-TC-----------------------TT---CT-----------GCGTA----CTCAT-T-A-------GG----
i Pantholops_hodgsonii.KE114631.1                       C 0 I 1
s Papio_anubis.CM001492.2                               188161113 65 - 188283584 T-----C-----T-----GAGACA-GA----GAG--ACAG----TGTT----GC-A-AT-CAAGACGATTACAA-TA-----------------------TT---CT-----------GTGCA----CAcac-a-g-------gaaggg
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              4203 65 +     25005 T-----C-----T-----GAGACA-GA----GAG--ACAG----TGTT----GC-A-AT-CAAGACGATTACAA-TA-----------------------TT---CT-----------GTGCA----CACAT-A-G-------GAAGGG
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47518485 65 +  47705337 T-----C-----T-----GAGACA-GA----GAG--ACAG----TGTT----GC-A-AT-CAAGACGATTACAA-TA-----------------------TT---CT-----------GTGCA----CACAC-A-G-------GAAGGG
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 72476 65 -    104429 T-----C-----T-----GAGACA-GA----GAG--ACAG----TGTT----GC-A-AT-CAAGACGATTACAA-TA-----------------------TT---CT-----------GTGCA----CACAT-A-G-------GAAGGG
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   11008 65 +     14967 T-----C-----T-----GAGACA-GA----GAG--ACAG----TGTT----GC-A-AT-CAAGACGATTACAA-TA-----------------------TT---CT-----------GTGCA----CACAC-A-G-------GAAGGG
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 6873 65 -      7628 T-----C-----T-----GAGACA-GA----GAG--ACAG----TGTT----GC-A-AT-CAAGACGATTACAA-TA-----------------------TT---CT-----------GTGCA----CACAT-A-G-------GAAGGG
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    122932 63 -    135482 ------C-----TAA-G-GACACG-GA----GAC--ACAG----TGTT----CC-C-AC-TCAGATGGAGACAA-TA-----------------------TT---CT-----------GTGTA----CACAT-A-A-------GT----
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          11512 65 -     23713 T-----C-----T-----GAGACG-GA----AAG--ACAG----TGCT----CC-T-AT-TAAGATGGGGACAA-TA-----------------------AT---CT-----------GTTAG----CAGAT-A-A-------GGGGAG
i Perodicticus_ibeanus.k141_117958                      C 0 I 1
s Perodicticus_potto.k141_1136815                           12663 65 +     61070 T-----C-----T-----GAGACG-GA----AAG--ACAG----TGCT----CC-T-AT-TAAGATGGGGACAA-TA-----------------------AT---CT-----------GTTAG----CAGAT-G-A-------GGGGAG
i Perodicticus_potto.k141_1136815                       C 0 I 1
s Perognathus_longimembris.PerPac_flattened_line_19359       2985 48 +     49596 ------------------------------------AGAG----TGTT----CC-C-AA-AGG-ATGGAGAGTA-TG-----------------------TT---TG-----------GTGTG----TCTTT-A-G-------AAAG--
i Perognathus_longimembris.PerPac_flattened_line_19359  I 35 I 1
s Peromyscus_maniculatus.KI615458.1                       2840092 59 -   3366660 T-----C-----T--CTTGGCACA-GA----GA------A----TGTA----TG-A-AC-AGGGCA-GAGGTAG-CA-----------------------TA---GA-----------GGGCA----CACAC-A-A-------GA----
i Peromyscus_maniculatus.KI615458.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    17672 67 -     36578 T-----C-----TAA-G-G-AAC--AG----GAG--ACAG----TGCT----CC-A-AC-AGCAATAGAAACAA-TT-----------------------TT---CT-----------GTGAG----CACACAC-A-------GGAGGG
i Petromus_typicus.PetTyp_scaffold_33007                I 24 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              4486 67 +      8220 T-----C-----TAA-G-GAGACA-GA----GAG--GCAG----TGCT----CC-C-AC-CAGAATGAAGACAG-TA-----------------------TTCTTCC-----------GTGTA----CTCAT-A-A-------GG----
i Phocoena_phocoena.PhoPho_flattened_line_53071         I 21 I 1
s Pipistrellus_pipistrellus.PipPip_scaffold_3306           101110 69 +    112873 T-----C-----TAA-G-GAGACA-GC----GAG--AAAG----CGTT----CC-C-AC-AAGAATGGAGACAG-CA-----------------------TT---CT-----------GTATA----CTTA--A-AG-GAAGAGA----
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        I 19 I 1
s Platanista_gangetica.PlaMin_flattened_line_72990          10968 67 +     21690 T-----C-----TAA-G-GAGACA-GA----GAG--GCAG----TGTT----CC-C-AC-CAGAATGGAGACAG-TA-----------------------TTCTTCT-----------GTGTA----CTCAT-A-A-------GG----
i Platanista_gangetica.PlaMin_flattened_line_72990      I 19 I 1
s Plecturocebus_bernhardi.k141_959214                       26806 65 +     44506 T-----C-----T-----GAGACA-GA----GAG--ACAG----TATT----CC-G-AT-CAAGACAATGACAG-TA-----------------------TT---TT-----------GTGCA----CACAT-A-G-------GGAGGG
i Plecturocebus_bernhardi.k141_959214                   I 18 C 0
s Plecturocebus_brunneus.k141_498086                        27019 65 +     67491 T-----C-----T-----GAGACA-GA----GAG--ACAG----TATT----CC-G-AT-CAAGACAATGACAG-TA-----------------------TT---TT-----------GTGCA----CACAT-A-G-------GGAGGG
i Plecturocebus_brunneus.k141_498086                    I 18 C 0
s Plecturocebus_caligatus.k141_2539816                      17258 65 -     98129 T-----C-----T-----GAGACA-GA----GAG--ACAG----TATT----CC-G-AT-CAAGACAATGACAG-TA-----------------------TT---TT-----------GTGCA----CACAT-A-G-------GGAGGG
i Plecturocebus_caligatus.k141_2539816                  I 18 C 0
s Plecturocebus_cinerascens.k141_744510                     26859 65 +    147771 T-----C-----T-----GAGACA-GA----GAG--ACAG----TATT----CC-G-AT-CAAGACAATGACAG-TA-----------------------TT---TT-----------GTGCA----CACAT-A-G-------GGAGGG
i Plecturocebus_cinerascens.k141_744510                 I 18 C 0
s Plecturocebus_cupreus.k141_1145860                         3494 65 -     43940 T-----C-----T-----GAGACA-GA----GAG--ACAG----TATT----CC-G-AT-CAAGACAATGACAG-TA-----------------------TT---TT-----------GTGCA----CACAT-A-G-------GGAGGG
i Plecturocebus_cupreus.k141_1145860                    I 18 C 0
s Plecturocebus_dubius.k141_3565563                          7577 65 -     55515 T-----C-----T-----GAGACA-GA----GAG--ACAG----TATT----CC-G-AT-CAAGACAATGACAG-TA-----------------------TT---TT-----------GTGCA----CACAT-A-G-------GGAGGG
i Plecturocebus_dubius.k141_3565563                     I 18 C 0
s Plecturocebus_grovesi.k141_242819                         26931 65 +    152463 T-----C-----T-----GAGACA-GA----GAG--ACAG----TATT----CC-G-AT-CAAGACAATGACAG-TA-----------------------TT---TT-----------GTGCA----CACAT-A-G-------GGAGGG
i Plecturocebus_grovesi.k141_242819                     I 18 C 0
s Plecturocebus_hoffmannsi.k141_985533                       4739 65 -    119457 T-----C-----T-----GAGACA-GA----GAG--ACAG----TATT----CC-G-AT-CAAGACAATGACAG-TA-----------------------TT---TT-----------GTGCA----CACAT-A-G-------GGAGGG
i Plecturocebus_hoffmannsi.k141_985533                  I 18 C 0
s Plecturocebus_miltoni.k141_841561                         16653 65 +    134592 T-----C-----T-----GAGACA-GA----GAG--ACAG----TATT----CC-G-AT-CAAGACAATGACAG-TA-----------------------TT---TT-----------GTGCA----CACAT-A-G-------GGAGGG
i Plecturocebus_miltoni.k141_841561                     I 18 C 0
s Plecturocebus_moloch.k141_890597                          27241 65 -     75465 T-----C-----T-----GAGACA-GA----GAG--ACAG----TATT----CC-G-AT-CAAGACAATGACAG-TA-----------------------TT---TT-----------GTGCA----CACAT-A-G-------GGAGGG
i Plecturocebus_moloch.k141_890597                      I 18 C 0
s Pongo_abelii.NDHI03003816.1                              191857 65 -    373494 T-----C-----T-----GAGAAA-GA----GAT--ACAG----TGTT----CC-A-AT-CAAGACGATGACAG-TA-----------------------TT---CT-----------GTGCA----CACAT-A-T-------GAAGGG
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19812504 65 +  19899266 T-----C-----T-----GAGAAA-GA----GAG--ACAG----TGTT----CC-A-AT-CAAGACGATGACAG-TA-----------------------TT---CT-----------GTGCA----CACAT-A-G-------GAAGGG
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                4667 68 -      9567 T-----C-----TAA-G-AAGGCA-GA----CAG--ACAG----TGTT----CC-A-AC-TCGGATGGAGACAG-TC-----------------------TT---CT-----------TTCCA----TACAT-A-A-------CAAAGG
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6853462 63 +  12164890 T-----C-----T-----GAAACA-GA----AAG--AC------TGTT----CC-C-AT-CAAGACAGGGACAG-TA-----------------------TT---CT-----------GTGAG----CACAT-T-A-------GGAGGA
i Prolemur_simus.MPIZ01000048.1                         C 0 I 1
s Propithecus_coquerelli.NW_012147863.1                     22271 63 -     30946 N-----N-----N-----NNNNNN-NN----NNN--NN------NNNN----NN-N-NN-NNNNNNNNNNNNNN-NN-----------------------NN---NN-----------NNNNN----NNNNN-N-N-------NNNNNN
i Propithecus_coquerelli.NW_012147863.1                 C 0 I 1
s Propithecus_coronatus.k141_1353159                         8565 65 +     11805 T-----C-----T-----GAGACA-GA----GAG--AC--A--GTGTT----CC-C-AT-AAAGATGGGGACAG-TA-----------------------TT---CT-----------GTGAG----AACAC-A-A-------GGAGGG
i Propithecus_coronatus.k141_1353159                    C 0 I 1
s Propithecus_diadema.k141_577245                           47899 65 +     52369 T-----C-----T-----GAGACA-GA----GAG--AC--A--GTGTT----CC-C-AT-AAAGATGGGGACAG-TA-----------------------TT---CT-----------GTGAG----AACAT-A-A-------GGAGGG
i Propithecus_diadema.k141_577245                       C 0 I 1
s Propithecus_edwardsi.k141_1317105                         40286 65 -     44753 T-----C-----T-----GAGACA-GA----GAG--AC--A--GTGTT----CC-C-AT-AAAGATGGGGACAG-TA-----------------------TT---CT-----------GTGAG----AACAT-A-A-------GGAGGG
i Propithecus_edwardsi.k141_1317105                     C 0 I 1
s Propithecus_perrieri.k141_7554                            22209 65 +     27322 T-----C-----T-----GAGACA-GA----GAG--AC--A--GTGTT----CC-C-AT-AAAGATGGGGACAG-TA-----------------------TT---CT-----------GTGAG----AACAT-A-A-------GGAGGG
i Propithecus_perrieri.k141_7554                        C 0 I 1
s Propithecus_tattersalli.k141_907138                       21854 65 -     53241 T-----C-----T-----GAGACA-GA----GAG--AC--A--GTGTT----CC-C-AT-AAAGATGGGGACAG-TA-----------------------TT---CT-----------GTGAG----AACAT-A-A-------GGAGGG
i Propithecus_tattersalli.k141_907138                   C 0 I 1
s Propithecus_verreauxi.k141_158021                         44117 65 -     48185 T-----C-----T-----GAGACA-GA----GAG--AC--A--GTGTT----CC-C-AT-AAAGATGGGGACAG-TA-----------------------TT---CT-----------GTGAG----AACAT-A-A-------GGAGGG
i Propithecus_verreauxi.k141_158021                     C 0 I 1
s Psammomys_obesus.NESX01026517.1                           39884 61 +     77221 A-----CCAGTCTA-TT-GA-AGAGAA----GA------C----TGCT----AG-A-AC-AAGGCTGGAGGCGG-GG-----------------------TT---CC-----------GGgca----cacag-----------------
i Psammomys_obesus.NESX01026517.1                       I 20 I 6
s Pteronotus_parnellii.KE867983.1                            7672 70 -     27784 T-----G-----t-aag-gagaca-gg----gag--aaaa----tgTT----TC-C-AC-CAGAATGGAGACAG-CG-----------------------TT---CT-----------GTGTA----CTCAT-C-AG-GAAGAGA----
i Pteronotus_parnellii.KE867983.1                       I 19 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        251825 61 -    344369 ------C-----TAA-G-GAGGCA-G------AG--ACAG----TGTT----CC-T-AC-CAGGATGGAGACAG-GA-----------------------TT---CT-----------GTTTA----CGCAC-A-A-------GA----
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB030474.1                              8976863 70 -  19980961 T-----C-----T-GCG-GAGATG-GG----GAG--AAAG----TATT----CC-C-AC-GACGGTGGAGACAG-CA-----------------------TT---CT-----------GTGTA----CTCAT-A-AG-GAAGAGA----
i Pteropus_alecto.KB030474.1                            C 0 I 1
s Pteropus_vampyrus.KN525782.1                            3455926 70 -   6428604 T-----C-----T-GCG-GAGATG-GG----GAG--AAAG----TATT----CC-C-AC-GACGGTGGAGACAG-CA-----------------------TT---CT-----------GTGTA----CTCAT-A-AG-GAAGAGA----
i Pteropus_vampyrus.KN525782.1                          C 0 I 33
s Puma_concolor.QAVW01000427.1                          131541397 62 - 161321710 ------c-----t--ag-gagaca-ga----cag--acag----tgtt----cC-C-AC-CCAGATAGAGATAG-TA-----------------------TT---CT-----------GTGTA----CACTT-A-A-------GA----
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                22375 64 +     68503 T-----C-----TGA-A-CAGACA-GA----GAG--GCAG----TGTT----CC-C-AT-CAAACTGGAGACAG-TA-----------------------TT---CT-----------GCGTA----CTCAT-T-A-------GG----
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 I 1
s Rattus_norvegicus.chr11                                13918492 64 +  90463843 C-----CCTGTCTA-TG-GG-AT---A----GG------G----TGTT----TG-A-AA-AGGAC-ATAGGTAC-TG-----------------------TT---CA-----------GGGCA----CACAc-a-t-------gaa-gg
i Rattus_norvegicus.chr11                               I 25 I 4
s Rhinolophus_sinicus.LVEH01000179.1                      1794297 70 +   2252614 T-----C-----T-aag-gagaca-gg----aag--aaag----tGTT----CC-C-AT-CAGAATGGAGATGG-TA-----------------------GT---CT-----------GTGTA----CTCTT-A-AG-GAAGAGA----
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 I 3
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                21823 70 +    109198 T-----C-----TAA-G-GAGATG-GG----GAG--AAAG----TGTT----CC-C-AC-CAGAATGGAGACAG-TA-----------------------TG---TT-----------GTGTA----CTCAT-A-AG-GAAGAGA----
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            I 49 I 35
s Saiga_tatarica.SaiTat_scaffold_371890                      3055 64 -      4338 T-----C-----TAA-A-GAGTCA-GA----GAG--GCTG----TGTT----CC-C-AT-CAGATTGGAGACAG-TA-----------------------TT---CT-----------GTGTA----ATCAT-T-A-------GG----
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 I 1
s Saimiri_boliviensis.NW_024100938.1                     15677263 65 -  43202129 t-----c-----t-----gagaca-ga----gag--acag----tATT----CC-G-AT-CAAGAGGATGACAG-TA-----------------------CT---CT-----------GTGCA----CACAT-A-G-------GGAGGG
i Saimiri_boliviensis.NW_024100938.1                    I 18 I 4
s Saimiri_cassiquiarensis.k141_808270                        9176 65 +     34089 T-----C-----T-----GAGACA-GA----GAG--ACAG----TATT----CC-G-AT-CAAGAGGATGACAG-TA-----------------------CT---CT-----------GTGCA----CACAT-A-G-------GGAGGG
i Saimiri_cassiquiarensis.k141_808270                   I 18 I 4
s Saimiri_macrodon.k141_2087127                              9116 65 -     60842 T-----C-----T-----GAGACA-GA----GAG--ACAG----TATT----CC-G-AT-CAAGAGGATGACAG-TA-----------------------CT---CT-----------GTGCA----CACAT-A-G-------GGAGGG
i Saimiri_macrodon.k141_2087127                         I 18 I 4
s Saimiri_oerstedii.k141_841116                              9210 65 +     67014 T-----C-----T-----GAGACA-GA----GAG--ACAG----TATT----CC-G-AT-CAAGAGGATGACAG-TA-----------------------CT---CT-----------GTGCA----CACAT-A-G-------GGAGGG
i Saimiri_oerstedii.k141_841116                         I 18 I 4
s Saimiri_sciureus.k141_1947592                              9187 65 +     60816 T-----C-----T-----GAGACA-GA----GAG--ACAG----TATT----CC-G-AT-CAAGAGGATGACAG-TA-----------------------CT---CT-----------GTGCA----CACAT-A-G-------GGAGGG
i Saimiri_sciureus.k141_1947592                         I 18 I 4
s Saimiri_ustus.k141_1282476                                 9124 65 -     76454 T-----C-----T-----GAGACA-GA----GAG--ACAG----TATT----CC-G-AT-CAAGAGGATGACAG-TA-----------------------CT---CT-----------GTGCA----CACAT-A-G-------GGAGGG
i Saimiri_ustus.k141_1282476                            I 18 I 4
s Sapajus_apella.ctg10                                   17345922 29 -  30362882 ---------------------------------------------------------------------GACAG-TA-----------------------CT---CT-----------GTGCA----CACAT-A-G-------GGAGGG
i Sapajus_apella.ctg10                                  I 31 C 0
s Sapajus_macrocephalus.k141_966464                         25243 29 -     62485 ---------------------------------------------------------------------GACAG-TA-----------------------CT---CT-----------GTGCA----CACAT-A-G-------GGAGGG
i Sapajus_macrocephalus.k141_966464                     I 31 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   41110 64 -    114521 T-----A-----TAA-G-GATACT-GG----CAG--ACAT----TGTT----CC-A-AC-CAGGATGGAGACAC-TA-----------------------AT---CT-----------GTGTA----ATTGT-A-A-------GA----
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 I 1
s Sigmodon_hispidus.SigHis_scaffold_11332                  106393 58 -    120886 T-----C-----TGA-G-GA--CA-GA----AA------A----TGTT----TG-A-AT-AGGGCAGGAGCTTG-CA-----------------------TG---CA-----------GAGCA----CACAC-A-A-------GG----
i Sigmodon_hispidus.SigHis_scaffold_11332               I 24 I 35
s Solenodon_paradoxus.SolPar_flattened_line_1012            25774 50 +    739146 -------------------------------CAG--ACAA----TATT----CC-C-AA-CAAGATAGAGACAT-AA-----------------------TT---CT-----------GTGTA----ACCAT-A-A-------GG----
i Solenodon_paradoxus.SolPar_flattened_line_1012        I 12 I 1
s Sorex_araneus.JH798170.1                               17776105 50 -  27805282 -------------------------------AAG--ACAA----TGTT----AC-T-CC-CAGGATGCAGACAG-TG-----------------------TT---CT-----------GTGTA----GTACT-A-A-------GA----
i Sorex_araneus.JH798170.1                              I 197 I 3
s Spermophilus_dauricus.KZ294190.1                        2244773 51 +   2842873 ------------------------------------ACAC----TGTG----CC-A-AG-AGGAATGGAGACAG-TA-----------------------TT---CT-----------GTGAA----CACAT-A-A-------GGAGGG
i Spermophilus_dauricus.KZ294190.1                      I 15 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             240600 63 -    276980 ------C-----TAA-G-GAGAGA-GA----GAG--ACAG----TGTT----CC-T-AC-CAGGATGGAGACAG-TA-----------------------TT---CT-----------GTGTA----CACAC-A-A-------GA----
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            34800 63 +     62062 ------C-----TAA-G-AAGACA-GA----GAG--ACAG----TGTT----CC-C-AC-CTGGATGGAGACAG-TA-----------------------TT---CT-----------GTGTA----CACAT-A-A-------GA----
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189276813 47 + 218635234 ------------------------------------ACAG----TGTT----CC-T-AC-CAGAATGGAGACAG-TA-----------------------TT---CT-----------GTGTA----CTCAT-A-A-------GA----
i Sus_scrofa.CM000824.4                                 I 12 C 0
s Symphalangus_syndactylus.tarseq_24                        19523 65 -  13920577 T-----C-----T-----GAGACA-GA----GAG--ACAG----TGTT----CC-A-AT-CAAGACAGTGACAG-TA-----------------------TT---CT-----------GTGCA----CACAT-A-G-------GAAGGG
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                3925 70 +     20549 T-----C-----TAA-G-GAGACA-GG----GAG--AAAG----TGTT----TC-C-AC-CAGAATGGAGACAG-TG-----------------------TT---CT-----------GTGTA----CTCAT-A-AG-GAAGAGA----
i Tadarida_brasiliensis.TadBra_scaffold_61492           I 19 I 1
s Tamandua_tetradactyla.TamTet_scaffold_26877               18021 65 +     45698 T-----T-----TAA-G-GAGAAG--G----GAG--GCAA----TGTT----CT-G-AC-AG--CTCGAGATAA-TA-----------------------TT---CT-----------GTGCA----TACAT-C-A-------GAACAG
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      812380 59 +   1148477 ------------TGA-A-GAGACA-G------AG--ACAA----TGAT----CC-C-AC-T-GGAGGAAGACAG-TA-----------------------TT---CT-----------GTCCA----CTTAT-A-A-------AG----
i Tapirus_indicus.TapInd_scaffold_176                   C 0 I 7
s Tapirus_terrestris.TapTer_scaffold_14939                  63023 61 +     99546 T-----C-----TGA-G-GAGACA-G------AG--ACAA----TGCT----CC-C-AC-T-GGAGGAAGACAG-TA-----------------------TT---CT-----------GTCCA----CTTAT-A-A-------AG----
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 I 7
s Theropithecus_gelada.CM009951.1                       194012646 65 - 194193292 T-----C-----T-----GAGACA-GA----GAG--ACAG----TGTT----GC-A-AT-CAAGACGATTACAA-TA-----------------------TT---CT-----------GTGCA----CACat-a-g-------gaaggg
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                  1209 65 -      3104 T-----T-----TAA-G-GAGATG-GG----GAG--ATGA----TGTT----TT-G-TC-TGAGATAGAGACAG-TA-----------------------TT---CT-----------GTGCA----TATAT-A-A-------A---AG
i Tolypeutes_matacus.TolMat_scaffold_475685             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  139679 70 -    259118 T-----C-----TAA-G-GAGACA-GG----AAG--GAAG----TGTT----TC-C-AA-CAGCATGGAGACAG-AG-----------------------TT---CT-----------GTGTA----CTCAT-A-AG-GAAGAGA----
i Tonatia_saurophila.TonSau_scaffold_3334               I 19 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                  10542 62 +     90398 T-----C-----TAA-G-AAGACA-GA----GAA--GTAG----TGTT----CC-C-AT-TAGATTTCAGACAG-TC-----------------------TT---CT-----------GTGTA----CTCAT-A-A-------------
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16090553 68 +  31416278 T-----C-----TAA-G-AAGACA-GG----GAG--GCAG----TGTT----CT-G-AC-CAGGATGGAGACAG-TA-----------------------TT---CT-----------TTCCA----TATGT-A-A-------CAAGTG
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2801825 68 -   3938065 T-----C-----t-aat-aagatg-ga----gaa--acag----tATT----CC-A-GT-GAGAATGCAGACAG-TA-----------------------TT---AT-----------GGGTA----CACAT-A-A-------GAAAGA
i Tupaia_chinensis.KB320831.1                           C 0 T 3315
s Tupaia_tana.TupTan_flattened_line_68454                   10648 68 +     13056 T-----C-----TAA-T-AAGATG-GA----GAA--ACAG----TATT----CC-A-GT-GAGAATGCAGACAG-TA-----------------------TT---AC-----------GGATA----CACAT-A-A-------GAAAGA
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69318756 67 -  96451834 T-----C-----TAA-G-GAGACA-GA----GAG--GCAG----TGCT----CC-C-AC-CAGAATGGAGACAG-TA-----------------------TTCTTCC-----------ATGTA----CTCAT-A-A-------GG----
i Tursiops_truncatus.MRVK01000923.1                     C 0 I 1
s Uropsilus_gracilis.UroGra_scaffold_4115                    1498 64 +    136657 T-----C-----TAA-G-GATCCT-GG----CAG--ACAC----TATT----CC-T-AC-CAGGATGGAGACAG-TA-----------------------AT---CT-----------GTGGA----AACAC-A-A-------GT----
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 I 1
s Ursus_maritimus.KK498671.1                              6522249 63 +  28682327 ------c-----t-gag-gagaca-ga----gag--gcag----tgtT----CC-T-AC-CAGGATGGAGACAG-TA-----------------------TT---CT-----------GTGTG----CACAC-A-A-------GA----
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                 10134 61 -     20643 T-----C-----T-----GAAACA-GA----A----AC------TGTT----CC-C-AT-CAAGAAAGGGACAG-TA-----------------------TT---CT-----------GTGAG----CACAT-T-A-------GGAGGG
i Varecia_rubra.k141_432109                             C 0 I 1
s Varecia_variegata.k141_775891                             29669 61 -     33872 T-----C-----T-----GAAACA-GA----A----AC------TGTT----CC-C-AT-CAAGACAGGGACAG-TA-----------------------TT---CT-----------GTGAG----CACAT-T-A-------GGAGGG
i Varecia_variegata.k141_775891                         C 0 I 1
s Vicugna_pacos.KN269600.1                                1529786 64 -   2331223 T-----C-----t-aag-gagaca-ga----gag--gcag----cGTT----CT-C-AC-CAGAATGGAGACAG-TA-----------------------TT---CT-----------GTGTA----CTCGT-C-A-------GG----
i Vicugna_pacos.KN269600.1                              C 0 I 1
s Vulpes_lagopus.VulLag_flattened_line_2045                145923 46 -    281493 ------C-----TAA-G-GAGACA-GA----GAG--ACAG----TGTT----CC-T-AC-CAGGATGGAGACAG-CA-----------------------T------------------------------------------------
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 I 11
s Xerus_inauris.XerIna_scaffold_7898                       132269 51 -    134049 ------------------------------------ATAG----TGTG----CC-A-AG-AGGAATGGAGACAG-TA-----------------------CT---CT-----------GTGCA----CACAC-C-A-------GGAGGA
i Xerus_inauris.XerIna_scaffold_7898                    I 15 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        221371 63 -    227762 ------C-----TAA-G-GAGACA-GA----GAG--ACAG----TGTT----AC-T-AG-CAGGATGGAGACAG-TG-----------------------TT---CT-----------GTGTA----CACAC-A-A-------GA----
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_202118                     1929 64 -      3360 T-----C-----AA-TG-GAAACC-GA----GAG--GCAG----AGTT----C--G-GC-AGGACTGGAGACAG-TG-----------------------TT---CT-----------GAGCA----CATCC-A-A-------GGA---
i Zapus_hudsonius.ZapHud_scaffold_202118                I 25 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            3341 67 -     13665 T-----C-----TAA-G-GAGACA-GA----GAG--GCAG----TGTT----CC-C-AC-CAGAATGGAGACAG-TA-----------------------TTCTTCT-----------GTGTA----CTCAT-A-A-------GG----
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 I 1
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Hylobates_pileatus_a.tarseq_592                             37267 2881 -     60944 I
e Trachypithecus_pileatus.k141_532233                       30126  0 -     40754 I
e Trachypithecus_phayrei.ctg364                            232455  0 -   1198723 I
e Trachypithecus_obscurus.k141_411399                         131  0 +     12010 I
e Trachypithecus_melamera.k141_950981                        2232  0 -      3512 I
e Trachypithecus_leucocephalus.k141_352489                   1214  0 +      9423 I
e Trachypithecus_laotum.k141_897381                         45646  0 -     53586 I
e Trachypithecus_hatinhensis.k141_641377                     1240  0 +      1365 I
e Trachypithecus_germaini.k141_240878                        5067  3 -     24955 I
e Trachypithecus_geei.k141_137495                           30106  0 -     42322 I
e Trachypithecus_francoisi.k141_1012484                       874  0 +      8809 I
e Trachypithecus_cristatus.k141_968903                      32589  3 +     43409 I
e Trachypithecus_crepusculus.k141_863597                     4944  0 -     23436 I
e Trachypithecus_auratus.k141_672638                         4947  3 +     38635 I
e Tarsius_wallacei.k141_48636                               64696  0 +     65473 C
e Tarsius_lariang.k141_609102                               31387  0 +     42269 C
e Semnopithecus_vetulus.k141_748269                          4706  0 +     17284 I
e Semnopithecus_schistaceus.k141_628310                     45652  0 -     53123 I
e Semnopithecus_priam.k141_368201                           10107  0 -     20692 I
e Semnopithecus_johnii.k141_1300894                          1368  0 +     13764 I
e Semnopithecus_hypoleucos.k141_2141024                      1351  0 -      8815 I
e Semnopithecus_entellus.k141_1743075                       45578  0 +     45790 I
e Rhinopithecus_strykeri.ctg241                            462135  0 +   1472273 I
e Rhinopithecus_bieti.k119_554384                            2917  0 -     17045 C
e Pygathrix_nigripes_a.k141_758202                             3050  0 -      8240 I
e Pygathrix_nigripes_b.ctg25                                14340869  0 -  15297009 I
e Pygathrix_cinerea.k141_951151                              3033  0 -      8225 I
e Presbytis_mitrata.k141_1767317                            10996  0 +     15869 I
e Presbytis_comata.k141_678168                              11007  0 +     11126 I
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000342.1                3428480  0 -   4356645 I
e Piliocolobus_kirkii.k141_451083                            4879  0 -     13367 I
e Piliocolobus_gordonorum.k141_736355                       29715  0 +     67079 I
e Piliocolobus_badius.k141_512007                           29798  0 +     37672 I
e Nasalis_larvatus.k141_1382660                              4275  0 +      5784 I
e Colobus_polykomos.k141_1178012                               88  3 -     11758 I
e Colobus_guereza.LG08                                   96946830  0 - 156195979 I
e Colobus_angolensis.KN983490.1                            283936  0 +    886210 I
e Cephalopachus_bancanus.k141_702587                        12545  0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530  0 +    345090 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               18315 32 +    209709 AA--G--A------A----G------AAT-A---AGA---G--------A------G-------A----ACC------TTTAAAAAGACA
s Acinonyx_jubatus.LLWD01000356.1                         2041104 11 +   3721120 --------------A----G------AAT-G---TGA---G--------A----------------------------------------
i Acinonyx_jubatus.LLWD01000356.1                       C 0 I 16
s Acomys_cahirinus.AcoCah_scaffold_1625                    118797 14 -    189883 AA-AG--G------A----A-------AA-A---GGA---G-------------------------------------------------
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 I 15
s Ailuropoda_melanoleuca.LNAT01000321.1                  10665044 10 +  23371972 --------------A----G-------AT-G---TGA---G--------A----------------------------------------
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 I 16
s Ailurus_fulgens.LNAC01000003.1                          7101992 11 -  16596857 --------------A----G------AAT-G---TGA---G--------A----------------------------------------
i Ailurus_fulgens.LNAC01000003.1                        C 0 I 17
s Allactaga_bullata.AllBul_scaffold_141108                   2172 25 -      7259 GA-AG--G------A----G------AAT-A---TGA---A------AGA---GAAG-------G----A----------T---------
i Allactaga_bullata.AllBul_scaffold_141108              C 0 I 12
s Allenopithecus_nigroviridis.k141_2469532                   6188 20 -     60446 AA--G--A------A----G------AAG-A---AGA---G--------A------G-------A----AAC------------------
i Allenopithecus_nigroviridis.k141_2469532              C 0 I 49
s Allochrocebus_lhoesti.k141_3566948                         6902 20 -     29318 AA--G--A------A----G------AAG-A---AGA---G--------A------G-------A----ACC------------------
i Allochrocebus_lhoesti.k141_3566948                    C 0 I 49
s Allochrocebus_preussi.k141_1108977                         5840 20 +     38766 AA--G--A------A----G------AAG-A---AGA---G--------A------G-------A----ACC------------------
i Allochrocebus_preussi.k141_1108977                    C 0 I 49
s Allochrocebus_solatus.k141_371672                          6798 20 -     80423 AA--G--A------A----G------AAG-A---AGA---G--------A------G-------A----ACC------------------
i Allochrocebus_solatus.k141_371672                     C 0 I 49
s Alouatta_belzebul.k141_276091                              1774 19 +     19852 AA--G--A------A----G------AAT-A---TTA---G--------A------G-------A----A----------T---------
i Alouatta_belzebul.k141_276091                         C 0 I 12
s Alouatta_caraya.k141_664908                                3997 19 -     12443 AA--G--A------A----G------AAT-A---TTA---G--------A------G-------A----A----------T---------
i Alouatta_caraya.k141_664908                           C 0 I 12
s Alouatta_discolor.k141_2023149                             1317 19 +      5070 AA--G--A------A----G------AAT-A---TTA---G--------A------G-------A----A----------T---------
i Alouatta_discolor.k141_2023149                        C 0 I 12
s Alouatta_juara.k141_799181                                 1064 19 -      1641 AA--G--A------A----G------AAT-A---TTA---G--------A------G-------A----A----------C---------
i Alouatta_juara.k141_799181                            C 0 I 12
s Alouatta_macconnelli.k141_2318944                          3803 19 -     24210 AA--G--A------A----G------AAT-A---TTA---G--------A------G-------A----A----------T---------
i Alouatta_macconnelli.k141_2318944                     C 0 I 12
s Alouatta_nigerrima.k141_494922                              307 19 -      8325 AA--G--A------A----G------AAT-A---TTA---G--------A------G-------A----A----------T---------
i Alouatta_nigerrima.k141_494922                        C 0 I 12
s Alouatta_palliata.k141_405616                              6221 19 +     16794 AA--G--A------A----G------AAT-A---TTA---G--------A------G-------A----A----------T---------
i Alouatta_palliata.k141_405616                         C 0 I 12
s Alouatta_puruensis.k141_347198                              250 19 +      9111 AA--G--A------A----G------AAT-A---TTA---G--------A------G-------A----A----------C---------
i Alouatta_puruensis.k141_347198                        N 0 I 12
s Alouatta_seniculus.k141_790278                             5498 19 -      9835 AA--G--A------A----G------AAT-A---TTA---G--------A------G-------A----A----------T---------
i Alouatta_seniculus.k141_790278                        C 0 I 12
s Ammotragus_lervia.NIVO01013474.1                        3528244 20 +   4113121 ----G--A------A----G------ATG-A---TGA---G--------A---GAGG-------A----A----------T---------
i Ammotragus_lervia.NIVO01013474.1                      I 1 I 12
s Anoura_caudifer.AnoCau_scaffold_422                      394333 18 -    631301 --------------A----G------AAT-A---TGA---G--------G---GAAG-------A----A----------T---------
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 I 12
s Antilocapra_americana.AntAmePen_scaffold_27338             5405 20 +     55446 ----G--A------A----G------ATT-A---TGA---G--------A---GAAG-------A----A----------T---------
i Antilocapra_americana.AntAmePen_scaffold_27338        I 1 I 12
s Aotus_azarae.k141_3170768                                 67106 19 +     78111 AA--G--A------A----G------AAT-A---TGA---G--------A------G-------A----A----------T---------
i Aotus_azarae.k141_3170768                             C 0 I 12
s Aotus_griseimembra.k141_3275623                           10050 19 +     22701 AA--G--A------A----G------AAT-A---TGA---G--------A------G-------A----A----------T---------
i Aotus_griseimembra.k141_3275623                       C 0 I 12
s Aotus_nancymaae.KZ196176.1                              5754017 19 +   9889416 aa--g--a------a----g------aat-A---TGA---G--------A------G-------A----A----------T---------
i Aotus_nancymaae.KZ196176.1                            C 0 I 12
s Aotus_trivirgatus.k141_1740727                            10594 19 -    104377 AA--G--A------A----G------AAT-A---TGA---G--------A------G-------A----A----------T---------
i Aotus_trivirgatus.k141_1740727                        I 25 I 12
s Aotus_vociferans.k141_718647                              10623 19 +     23246 AA--G--A------A----G------AAT-A---TGA---G--------A------G-------A----A----------T---------
i Aotus_vociferans.k141_718647                          C 0 I 12
s Aplodontia_rufa.AprRuf_scaffold_101456                     3280 13 +     11424 GC-AA--A------A----T------AAT-A---AG------------------------------------------------------
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 I 15
s Arctocebus_calabarensis.k141_587554                        7200 14 +      9265 AA--G--A------A----G------AAT-A---TGA---G-------------------------------------------------
i Arctocebus_calabarensis.k141_587554                   I 1 I 20
s Artibeus_jamaicensis.ArtJam_scaffold_41619                12626 18 -     29036 --------------A----G------AAT-A---TGA---G--------G---GAAG-------A----A----------T---------
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 I 12
s Ateles_geoffroyi_b.tarseq_2582                             9543908 19 +  39197703 AA--G--A------A----G------AAT-A---TTA---G--------A------G-------A----A----------T---------
i Ateles_geoffroyi_b.tarseq_2582                           C 0 I 12
s Ateles_belzebuth.k141_1348307                             65182 19 +     85812 AA--G--A------A----G------AAT-A---TTA---G--------A------G-------A----A----------T---------
i Ateles_belzebuth.k141_1348307                         C 0 I 12
s Ateles_chamek.k141_1072810                                16195 19 +     89302 AA--G--A------A----G------AAT-A---TTA---G--------A------G-------A----A----------T---------
i Ateles_chamek.k141_1072810                            C 0 I 12
s Ateles_geoffroyi_a.k141_1300742                             20696 19 -     58268 AA--G--A------A----G------AAT-A---TTA---G--------A------G-------A----A----------T---------
i Ateles_geoffroyi_a.k141_1300742                         C 0 I 12
s Ateles_marginatus.k141_899112                             68690 19 +    119057 AA--G--A------A----G------AAT-A---TTA---G--------A------G-------A----A----------T---------
i Ateles_marginatus.k141_899112                         C 0 I 12
s Ateles_paniscus.k141_1631200                              10659 19 -     25888 AA--G--A------A----G------AAT-A---TTA---G--------A------G-------A----A----------T---------
i Ateles_paniscus.k141_1631200                          C 0 I 12
s Avahi_laniger.k141_2840928                                11723 25 -     16375 AA--G--A------A----G------AAT-A---CGA---G--------A------A-------A----A--GAAGAA--T---------
i Avahi_laniger.k141_2840928                            I 1 I 12
s Avahi_peyrierasi.k141_798820                               5339 25 +      6337 AA--G--A------A----G------AAT-A---CGA---G--------A------A-------A----A--GAAGAA--T---------
i Avahi_peyrierasi.k141_798820                          I 1 I 12
s Balaenoptera_acutorostrata.KI537095.1                  26385632 20 +  51448160 ----G--A------A----G------ATT-A---TGA---G--------A---GAAG-------A----A----------T---------
i Balaenoptera_acutorostrata.KI537095.1                 I 1 I 12
s Balaenoptera_bonaerensis.DF502048.1                       10805 20 -     13118 ----G--A------A----G------ATT-A---TGA---G--------A---GAAG-------A----A----------T---------
i Balaenoptera_bonaerensis.DF502048.1                   I 1 I 12
s Beatragus_hunteri.BeaHun_scaffold_21644                   50213 20 -     72089 ----G--A------A----G------ATT-A---TGA---G--------A---GAAG-------A----A----------T---------
i Beatragus_hunteri.BeaHun_scaffold_21644               I 1 I 12
s Bison_bison.KN264915.1                                   305163 20 -   6870073 ----G--A------A----A------ATT-A---TGA---G--------A---GAAG-------A----A----------T---------
i Bison_bison.KN264915.1                                I 1 I 12
s Bos_indicus.CM003021.1                                 22959269 20 + 161108492 ----G--A------A----A------ATT-A---TGA---G--------A---GAAG-------A----A----------T---------
i Bos_indicus.CM003021.1                                I 1 I 12
s Bos_mutus.JH883513.1                                     421448 20 +    998990 ----G--A------A----A------ATT-A---TGA---G--------A---GAAG-------A----A----------T---------
i Bos_mutus.JH883513.1                                  I 1 I 12
s Bos_taurus.CM000177.6                                  22667921 20 + 158972876 ----G--A------A----A------ATT-A---TGA---G--------A---GAAG-------A----A----------T---------
i Bos_taurus.CM000177.6                                 I 1 I 12
s Bubalus_bubalis.KI419065.1                               676759 20 +   1914593 ----G--A------A----G------ATT-A---TGA---G--------A---GAAG-------A----A----------T---------
i Bubalus_bubalis.KI419065.1                            I 1 I 12
s Cacajao_ayresi.k141_724503                               118559 19 -    171031 AA--G--A------A----G------AAT-A---TGA---G--------A------G-------A----A----------T---------
i Cacajao_ayresi.k141_724503                            C 0 I 12
s Cacajao_calvus.k141_96166                                 17579 19 +    125063 AA--G--A------A----G------AAT-A---TGA---G--------A------G-------A----A----------T---------
i Cacajao_calvus.k141_96166                             C 0 I 12
s Cacajao_hosomi.k141_303789                                19626 19 -    216513 AA--G--A------A----G------AAT-A---TGA---G--------A------G-------A----A----------T---------
i Cacajao_hosomi.k141_303789                            C 0 I 12
s Cacajao_melanocephalus.k141_1160263                       12169 19 -    134917 AA--G--A------A----G------AAT-A---TGA---G--------A------G-------A----A----------T---------
i Cacajao_melanocephalus.k141_1160263                   C 0 I 12
s Camelus_bactrianus.KN276303.1                           3224743 20 -   8989139 ----G--A------A----G------ATT-A---TGA---G--------A---GAAG-------A----A----------T---------
i Camelus_bactrianus.KN276303.1                         I 1 I 12
s Camelus_dromedarius.KN271192.1                           402443 20 -  15254737 ----G--A------A----G------ATT-A---TGA---G--------A---GAAG-------A----A----------T---------
i Camelus_dromedarius.KN271192.1                        I 1 I 12
s Camelus_ferus.KB016973.1                                2978181 20 +   6889770 ----G--A------A----G------ATT-A---TGA---G--------A---GAAG-------A----A----------T---------
i Camelus_ferus.KB016973.1                              I 1 I 12
s CanFam4.chr31                                          11527896 11 +  39901454 --------------A----G------AAT-G---TGA---G--------A----------------------------------------
i CanFam4.chr31                                         I 11 I 16
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   22870 11 +     87036 --------------A----G------AAT-G---TGA---G--------A----------------------------------------
i Canis_lupus_VD.CanFam_VD_scaffold_16982               I 11 I 16
s Canis_lupus_dingo.QKWQ01001993.1                       11274793 11 -  35597290 --------------A----G------AAT-G---TGA---G--------A----------------------------------------
i Canis_lupus_dingo.QKWQ01001993.1                      I 11 I 16
s Canis_lupus_familiaris.chr31                           11097290 11 +  39895921 --------------A----G------AAT-G---TGA---G--------A----------------------------------------
i Canis_lupus_familiaris.chr31                          I 11 I 16
s Canis_lupus_orion.HG994411.1                           16464075 11 -  44759192 --------------A----G------AAT-G---TGA---G--------A----------------------------------------
i Canis_lupus_orion.HG994411.1                          I 11 I 16
s Capra_aegagrus.CM003214.1                              21335677 20 + 157394656 ----G--A------A----G------ATG-A---TGA---G--------A---GAAG-------A----A----------T---------
i Capra_aegagrus.CM003214.1                             I 1 I 12
s Capra_hircus.CM004562.1                               135714030 20 - 157403528 ----G--A------A----G------ATG-A---TGA---G--------A---GAAG-------A----A----------T---------
i Capra_hircus.CM004562.1                               I 1 I 12
s Carollia_perspicillata.CarPer_scaffold_4436               63620 18 +     67245 --------------A----G------AAT-A---TGA---G--------G---GAAG-------A----A----------T---------
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 I 12
s Capromys_pilorides.CapPil_scaffold_780116                   288  4 +      1571 GA-AG-------------------------------------------------------------------------------------
i Capromys_pilorides.CapPil_scaffold_780116             C 0 I 6
s Castor_canadensis.CasCan_scaffold_1326                      731 14 -    202837 AA-AG--A------A----G------AAT-A---TGA-----------------------------------------------------
i Castor_canadensis.CasCan_scaffold_1326                C 0 I 24
s Catagonus_wagneri.CatWag_scaffold_1305                   164488 20 -    276539 ----G--A------A----G------ATA-A---TGA---G--------A---GAAG-------A----A----------T---------
i Catagonus_wagneri.CatWag_scaffold_1305                I 21 I 12
s Cavia_aperea.AVPZ01000278.1                            15790433 15 -  24422027 ---------------------------NN-N---NNN---N--------N---NNNN-------N----N----------N---------
i Cavia_aperea.AVPZ01000278.1                           I 4 I 12
s Cavia_porcellus.DS562889.1                             15802372 15 -  24440124 ---------------------------at-a---tga---a--------a---gaag-------a----a----------t---------
i Cavia_porcellus.DS562889.1                            I 4 I 12
s Cavia_tschudii.CavTsc_scaffold_488                       180544 15 +    436027 ---------------------------AT-A---TGA---A--------A---GAAG-------A----A----------T---------
i Cavia_tschudii.CavTsc_scaffold_488                    I 4 I 12
s Cebus_albifrons.Contig22                               18896263 19 -  29618158 AA--G--A------A----G------AAT-A---TGA---G--------A------G-------A----A----------T---------
i Cebus_albifrons.Contig22                              C 0 I 12
s Cebus_olivaceus.k141_93739                                12913 19 -     26817 AA--G--A------A----G------AAT-A---TGA---G--------A------G-------A----A----------T---------
i Cebus_olivaceus.k141_93739                            C 0 I 12
s Cebus_unicolor.k141_239009                                17157 19 +     25043 AA--G--A------A----G------AAT-A---TGA---G--------A------G-------A----A----------T---------
i Cebus_unicolor.k141_239009                            C 0 I 12
s Ceratotherium_simum.JH767818.1                          4369713 20 +   7569818 ----G--A------A----G------AAT-A---TGA---G--------A---GAAG-------A----A----------T---------
i Ceratotherium_simum.JH767818.1                        I 7 I 12
s Cercocebus_atys.KQ010443.1                              6560128 20 +   6739814 aa--g--a------a----g------aag-a---aga---g--------a------g-------a----agc------------------
i Cercocebus_atys.KQ010443.1                            C 0 I 49
s Cercocebus_chrysogaster.k141_2328246                      31605 20 +     60454 AA--G--A------A----G------AAG-A---AGA---G--------A------G-------A----AGC------------------
i Cercocebus_chrysogaster.k141_2328246                  C 0 I 49
s Cercocebus_lunulatus.k141_4634644                          6809 20 -     21101 AA--G--A------A----G------AAG-A---AGA---G--------A------G-------A----AGC------------------
i Cercocebus_lunulatus.k141_4634644                     C 0 I 49
s Cercocebus_torquatus.k141_3969582                         64119 20 -    107033 AA--G--A------A----G------AAG-A---AGA---G--------A------G-------A----AGC------------------
i Cercocebus_torquatus.k141_3969582                     C 0 I 49
s Cercopithecus_ascanius.k141_4123525                        6987 12 -     17608 ----------------------------G-A---AGA---G--------A------G-------A----ACC------------------
i Cercopithecus_ascanius.k141_4123525                   I 5 I 49
s Cercopithecus_cephus.k141_3893260                          4147 20 +     45019 AA--G--A------A----G------AAG-A---AGA---G--------A------G-------A----ACC------------------
i Cercopithecus_cephus.k141_3893260                     C 0 I 49
s Cercopithecus_diana.k141_2561715                           4423 20 +     15177 AA--G--A------A----G------AAG-A---AGA---G--------A------G-------A----ACC------------------
i Cercopithecus_diana.k141_2561715                      C 0 I 49
s Cercopithecus_hamlyni.k141_129805                          7029 20 +     16677 AA--G--A------A----G------AAG-A---AGA---G--------A------G-------A----ACC------------------
i Cercopithecus_hamlyni.k141_129805                     C 0 I 49
s Cercopithecus_lowei.k141_623764                           29219 26 +     35983 AA--G--A------A----GAAGAATAAG-A---AGA---G--------A------G-------A----ACC------------------
i Cercopithecus_lowei.k141_623764                       C 0 I 49
s Cercopithecus_albogularis.ctg51                              11995750 20 +  12117833 AA--G--A------A----G------AAG-A---AGA---G--------A------G-------A----ACC------------------
i Cercopithecus_albogularis.ctg51                             C 0 I 49
s Cercopithecus_mona.ctg12                               46482726 26 +  46592721 AA--G--A------A----GAAGAATAAG-A---AGA---G--------A------G-------A----ACC------------------
i Cercopithecus_mona.ctg12                              C 0 I 49
s Cercopithecus_neglectus.k141_2169300                        843 20 -     27215 AA--G--A------A----G------AAG-A---AGA---G--------A------G-------A----ACC------------------
i Cercopithecus_neglectus.k141_2169300                  C 0 I 49
s Cercopithecus_nictitans.k141_1129315                       7043 20 +     35577 AA--G--A------A----G------AAG-A---AGA---G--------A------G-------A----ACC------------------
i Cercopithecus_nictitans.k141_1129315                  C 0 I 49
s Cercopithecus_petaurista.k141_64532                        6837 20 -     25661 AA--G--A------A----G------AAG-A---AGA---G--------A------G-------A----ACC------------------
i Cercopithecus_petaurista.k141_64532                   C 0 I 49
s Cercopithecus_pogonias.k141_3109732                        7009 20 -     17744 AA--G--A------A----G------AAG-A---AGA---G--------A------G-------A----ACC------------------
i Cercopithecus_pogonias.k141_3109732                   C 0 I 49
s Cercopithecus_roloway.k141_2263608                        26378 20 +     37128 AA--G--A------A----G------AAG-A---AGA---G--------A------G-------A----ACC------------------
i Cercopithecus_roloway.k141_2263608                    C 0 I 49
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           5425 26 -      6963 GA-AG--A------A----G------AAT-T---TGA---G--------A---GAAG-------A-GAAA----------T---------
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 I 12
s Cheirogaleus_major.k141_1157592                           63939 25 -     68416 AA--G--A------A----G------AAT-A---TGA---G--------A------A-------A----A--GAAGAA--T---------
i Cheirogaleus_major.k141_1157592                       I 1 I 12
s Cheirogaleus_medius.k141_854352                             241 25 +     27737 AA--G--A------A----G------AAT-A---TGA---G--------A------A-------A----A--GAAGAA--T---------
i Cheirogaleus_medius.k141_854352                       I 1 I 12
s Cheracebus_lucifer.k141_619653                            10219 19 -     18223 AA--G--A------A----G------AAT-A---TGA---G--------A------G-------A----A----------T---------
i Cheracebus_lucifer.k141_619653                        C 0 I 12
s Cheracebus_lugens.k141_996499                              1960 19 +    188999 AA--G--A------A----G------AAT-A---TGA---G--------A------G-------A----A----------T---------
i Cheracebus_lugens.k141_996499                         C 0 I 12
s Cheracebus_regulus.k141_2128895                           46259 19 +     57117 AA--G--A------A----G------AAT-A---TGA---G--------A------G-------A----A----------T---------
i Cheracebus_regulus.k141_2128895                       C 0 I 12
s Cheracebus_torquatus.k141_315545                          50939 19 +     54541 AA--G--A------A----G------AAT-A---TGA---G--------A------G-------A----A----------T---------
i Cheracebus_torquatus.k141_315545                      C 0 I 12
s Chinchilla_lanigera.JH721867.1                         15965127  4 +  43084221 --------------------------------------------------------g-------a----a----------t---------
i Chinchilla_lanigera.JH721867.1                        I 3 I 12
s Chiropotes_israelita.k141_1189915                         75740 19 +    196370 AA--G--A------A----G------AAT-A---TGA---G--------A------G-------A----A----------T---------
i Chiropotes_israelita.k141_1189915                     C 0 I 12
s Chiropotes_sagulatus.k141_773804                          19921 19 +     40510 AA--G--A------A----G------AAT-A---TGA---G--------A------G-------A----A----------T---------
i Chiropotes_sagulatus.k141_773804                      C 0 I 12
s Chlorocebus_aethiops.ctg22                             15144563 20 -  15256731 AA--G--A------A----G------AAG-A---AGA---G--------A------G-------A----ACC------------------
i Chlorocebus_aethiops.ctg22                            C 0 I 49
s Chlorocebus_pygerythrus.k141_1486215                      39027 20 -     53260 AA--G--A------A----G------AAG-A---AGA---G--------A------G-------A----ACC------------------
i Chlorocebus_pygerythrus.k141_1486215                  C 0 I 49
s Chlorocebus_sabaeus.CM001963.2                        101149586 20 + 101219884 aa--g--a------a----g------aag-a---aga---g--------a------g-------a----acc------------------
i Chlorocebus_sabaeus.CM001963.2                        C 0 I 49
s Choloepus_didactylus.ChoDid_scaffold_36182                19443 26 -     21363 GA-AG--A------A----G------AAT-A---TGA---G--------A---GAAG-------A-GAAA----------T---------
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 I 12
s Choloepus_hoffmanni.KN194586.1                           764747 26 +    964067 ga-ag--a------a----g------aat-a---tGA---G--------A---GAAG-------A-GAAA----------T---------
i Choloepus_hoffmanni.KN194586.1                        C 0 I 12
s Colobus_angolensis.KN985967.1                          10889423  3 +  10971483 ------------------------------------------------------------------------------AGT---------
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147667351  3 + 156195979 ------------------------------------------------------------------------------AGT---------
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            19335  3 +     23629 ------------------------------------------------------------------------------AGT---------
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_954668              1671 21 -      1738 GA-AA--A------A----G------AAT-A---TGA---G--------A---GAAC-------A-------------------------
i Chrysochloris_asiatica.ChrAsi_scaffold_954668         C 0 I 11
s Condylura_cristata.JH655880.1                          60623739 23 +  78930452 ----A--A------AGTA-G------AAT-A---TAA---C--------A---GAAG-------A----A----------T---------
i Condylura_cristata.JH655880.1                         I 1 I 12
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         4138 17 -      5782 ----G--A------A----G------AAT-T---TGA---G--------A------G-------A----A----------T---------
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    I 1 I 12
s Cricetomys_gambianus.CriGam_scaffold_949                 283700 22 -    399297 AA-AA--AAGAAAGA----G------GAA-A---TGA---G--------A----------------------------------------
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 I 15
s Cricetulus_griseus.LT883672.1                          53036011 16 +  72327488 -gtag--a------a----g------aaa-g---gga---g--------a----------------------------------------
i Cricetulus_griseus.LT883672.1                         C 0 I 19
s Crocidura_indochinensis.CroInd_scaffold_27484              3634 23 -     22648 ----G--A------T----G------AAT-AAAATAA---G--------A---GACA-------A----A----------T---------
i Crocidura_indochinensis.CroInd_scaffold_27484         I 3 I 12
s Cryptoprocta_ferox.CryFer_flattened_line_19014            59116 11 -     70449 --------------A----G------AAT-G---TGA---G--------A----------------------------------------
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 I 16
s Ctenodactylus_gundi.CteGun_scaffold_447                  215005 19 -    956709 --------------A----G------ACTCA---GGT---A--------ATA---TG-------G----A----------T---------
i Ctenodactylus_gundi.CteGun_scaffold_447               I 21 I 12
s Cuniculus_paca.CunPac_flattened_line_16637                21622 15 +     26546 ---------------------------AC-A---TGA---G--------A---GAAG-------A----A----------T---------
i Cuniculus_paca.CunPac_flattened_line_16637            I 5 I 12
s Dasyprocta_punctata.DasPun_flattened_line_634             62765 15 -    236241 ---------------------------AT-A---TGA---G--------A---GAAG-------A----A----------T---------
i Dasyprocta_punctata.DasPun_flattened_line_634         I 8 I 12
s Dasypus_novemcinctus.JH568778.1                          186474 21 -   6883506 --------------A----G------AAc-t---taa---g--------a---gaag-------a-gaaa----------t---------
i Dasypus_novemcinctus.JH568778.1                       I 2 I 12
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 36655  4 -     67205 GA-AG-------------------------------------------------------------------------------------
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 I 6
s Daubentonia_madagascariensis.ctg11                     16849885 25 +  31942871 aa--g--a------a----g------aat-a---tga---g--------a------g-------a----a--gaagaa--T---------
i Daubentonia_madagascariensis.ctg11                    I 1 I 12
s Delphinapterus_leucas.KZ290064.1                       80042229 20 -  96802777 ----G--A------A----G------ATT-A---TGA---G--------A---GAAG-------A----A----------T---------
i Delphinapterus_leucas.KZ290064.1                      I 1 I 12
s Desmodus_rotundus.KZ672188.1                           18702836 18 -  18957592 --------------A----G------AAT-A---TGA---G--------G---GAAG-------A----A----------T---------
i Desmodus_rotundus.KZ672188.1                          C 0 I 12
s Dicerorhinus_sumatrensis.PEKH010003161.1                 328112 20 +    993696 ----G--A------A----G------AAT-A---TGA---G--------A---GAAG-------A----A----------T---------
i Dicerorhinus_sumatrensis.PEKH010003161.1              I 7 I 12
s Diceros_bicornis.DicBicMic_scaffold_9545                   8746 20 +    151128 ----G--A------A----G------AAT-A---TGA---G--------A---GAAG-------A----A----------T---------
i Diceros_bicornis.DicBicMic_scaffold_9545              I 7 I 12
s Dinomys_branickii.DinBra_scaffold_1996                   160600  4 +    228994 --------------------------------------------------------G-------A----A----------T---------
i Dinomys_branickii.DinBra_scaffold_1996                I 3 I 12
s Dipodomys_ordii.KN672545.1                              3661029 28 +   4240102 ----G--A------A----G------Aat-a---tga---gaggagagga---gaat-------g----a----------c---------
i Dipodomys_ordii.KN672545.1                            I 8 I 12
s Dipodomys_stephensi.DipSte_scaffold_84338                  3403 28 -     11986 ----G--A------A----G------TAT-A---TGA---GAGCAGAGGA---GAAT-------G----A----------C---------
i Dipodomys_stephensi.DipSte_scaffold_84338             I 8 I 12
s Dolichotis_patagonum.DolPat_scaffold_14102                41330 15 -     73477 ---------------------------AT-A---TGA---A--------A---GAAG-------A----A----------T---------
i Dolichotis_patagonum.DolPat_scaffold_14102            I 4 I 12
s Echinops_telfairi.JH980316.1                           23000665 23 -  44670279 --------------A----G------GAT-A---TGA---G--------A---GAAGATATGAGA-------------------------
i Echinops_telfairi.JH980316.1                          I 2 I 11
s Eidolon_helvum.AWHC01235761.1                              3711 20 -      8619 ----G--C------A----G------GTT-C---TAA---G--------G------G-------AAGA-A----------A---------
i Eidolon_helvum.AWHC01235761.1                         I 1 I 12
s Elaphurus_davidianus.JRFZ01086400.1                     1498158 20 +   1727528 ----G--A------A----G------ATT-A---CGA---G--------A---GAAG-------A----A----------T---------
i Elaphurus_davidianus.JRFZ01086400.1                   I 1 I 12
s Elephantulus_edwardii.JH947210.1                        7834917 17 +  15467074 -------G------A----G------AAT-A---TGA---G--------AAAA---T-------A-------------------------
i Elephantulus_edwardii.JH947210.1                      C 0 I 10
s Ellobius_lutescens.LOEQ01003611.1                        244732 11 -    369425 --------------T----G------AAA-G---TGA---G--------A----------------------------------------
i Ellobius_lutescens.LOEQ01003611.1                     C 0 I 18
s Ellobius_talpinus.LOJH01076532.1                           1076 11 +      9159 --------------t----a------aaa-a---tga---g--------a----------------------------------------
i Ellobius_talpinus.LOJH01076532.1                      C 0 I 18
s Enhydra_lutris.KZ291749.1                              85879042 11 +  99434291 --------------A----G------AAT-G---TGA---G--------A----------------------------------------
i Enhydra_lutris.KZ291749.1                             C 0 I 16
s Eptesicus_fuscus.JH977687.1                             4710602 19 +   6522550 ----g--a------a----g------gat-a---GGA---G--------A---G-TG-------A----A----------T---------
i Eptesicus_fuscus.JH977687.1                           I 1 I 19
s Equus_asinus.JREZ01000062.1                             5857975 20 -   7175178 ----g--a------a----g------aat-a---tGA---G--------A---GAAG-------A----A----------T---------
i Equus_asinus.JREZ01000062.1                           I 7 I 12
s Equus_caballus.CM000402.2                              13356461 20 +  41866177 ----g--a------a----g------aat-a---tGA---G--------A---GAAG-------A----A----------T---------
i Equus_caballus.CM000402.2                             I 7 I 12
s Equus_przewalskii.ATBW01073585.1                          17951 20 +     92910 ----g--a------a----g------aat-a---tGA---G--------A---GAAG-------A----A----------T---------
i Equus_przewalskii.ATBW01073585.1                      I 7 I 12
s Erinaceus_europaeus.JH835290.1                         11543129 19 +  16010500 ----G--G------A----G------ACT-A----GA---G--------A---GAAG-------G----T----------T---------
i Erinaceus_europaeus.JH835290.1                        I 5 I 12
s Erythrocebus_patas.Contig8                             48781596 20 -  48907691 AA--G--A------A----G------AAG-A---AGA---G--------A------T-------A----ACC------------------
i Erythrocebus_patas.Contig8                            C 0 I 49
s Eschrichtius_robustus.EscRob_flattened_line_685          320476 20 +    330699 ----G--A------A----G------ATT-A---TGA---G--------A---GAAG-------A----A----------T---------
i Eschrichtius_robustus.EscRob_flattened_line_685       I 1 I 12
s Eubalaena_japonica.EubJap_flattened_line_7756             66932 20 +     89355 ----G--A------A----G------ATT-A---TGA---G--------A---GAAG-------A----A----------T---------
i Eubalaena_japonica.EubJap_flattened_line_7756         I 1 I 12
s Eulemur_albifrons.k141_715837                             10009 23 +     13586 ----G--A------A----G------AAT-A---TGA---G--------C------A-------A----A--GAAGAA--T---------
i Eulemur_albifrons.k141_715837                         I 3 I 12
s Eulemur_collaris.k141_1015201                              3266 25 -      4292 AA--G--A------A----G------AAT-A---TGA---G--------C------A-------A----A--GAAGAA--T---------
i Eulemur_collaris.k141_1015201                         I 1 I 12
s Eulemur_coronatus.k141_3240342                            16403 25 +     36558 AA--G--A------A----G------AAT-A---TGA---G--------C------A-------A----A--GAAGAA--T---------
i Eulemur_coronatus.k141_3240342                        I 1 I 12
s Eulemur_flavifrons.k141_903901                            12725 25 +     60246 AA--G--A------A----G------AAT-A---TGA---G--------C------A-------A----A--GAAGAA--T---------
i Eulemur_flavifrons.k141_903901                        I 1 I 12
s Eulemur_fulvus.k141_653297                                16210 25 +    109717 AA--G--A------A----G------AAT-A---TGA---G--------C------A-------A----A--GAAGAA--T---------
i Eulemur_fulvus.k141_653297                            I 1 I 12
s Eulemur_macaco.k141_747087                                 4193 25 -     19505 AA--G--A------A----G------AAT-A---TGA---G--------C------A-------A----A--GAAGAA--T---------
i Eulemur_macaco.k141_747087                            I 1 I 12
s Eulemur_mongoz.k141_825972                                20868 25 +     27497 AA--G--A------A----G------AAT-A---TGA---G--------C------A-------A----A--GAAGAA--T---------
i Eulemur_mongoz.k141_825972                            I 1 I 12
s Eulemur_rubriventer.k141_411740                           23324 25 +     26808 AA--G--A------A----G------AAT-A---TGA---G--------C------A-------A----A--GAAGAA--T---------
i Eulemur_rubriventer.k141_411740                       I 1 I 12
s Eulemur_rufus.k141_1620292                                38056 25 +     46535 AA--G--A------A----G------AAT-A---TGA---G--------C------A-------A----A--GAAGAA--T---------
i Eulemur_rufus.k141_1620292                            I 1 I 12
s Eulemur_sanfordi.k141_186399                              20797 25 -     29447 AA--G--A------A----G------AAT-A---TGA---G--------C------A-------A----A--GAAGAA--T---------
i Eulemur_sanfordi.k141_186399                          I 1 I 12
s Felis_catus.AANG03202589.1                                  566 11 -       609 --------------A----G------AAT-G---TGA---G--------a----------------------------------------
i Felis_catus.AANG03202589.1                            I 58 n 260
s Felis_catus_fca126.CM031420.1                         129287495 11 - 158578461 --------------A----G------AAT-G---TGA---g--------a----------------------------------------
i Felis_catus_fca126.CM031420.1                         C 0 I 251
s Felis_nigripes.FelNig_flattened_line_8080                 28598 11 +     52776 --------------A----G------AAT-G---TGA---G--------A----------------------------------------
i Felis_nigripes.FelNig_flattened_line_8080             C 0 I 338
s Fukomys_damarensis.KN123630.1                          13896901 20 -  19261668 ga-ag--a------a----a------aat-a---tga---g--------a------g-------a----a----------t---------
i Fukomys_damarensis.KN123630.1                         C 0 I 12
s Galago_moholi.ctg555                                     216053 21 -    847004 AG--G--A------A----G------AAT-C---TGA---G--------A------G-------G----A--GA------A---------
i Galago_moholi.ctg555                                  I 1 I 13
s Galago_senegalensis.k141_964197                           18414 21 -     43889 AG--G--A------A----G------AAT-C---TGA---G--------A------G-------G----A--GA------A---------
i Galago_senegalensis.k141_964197                       I 1 I 13
s Galagoides_demidoff.k141_1769638                          15556 22 +     27357 AG--G--A------A----G------GAT-A---TGA---G--------A------G-------G----A--G--GA---T---------
i Galagoides_demidoff.k141_1769638                      I 1 I 12
s Galeopterus_variegatus.GalVar_scaffold_354               160326 26 +    324696 AA-AG--C------G----G------AAT-A---TGA---G--------AAAAGAAG-------A----A----------T---------
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 I 12
s Giraffa_tippelskirchi.LVKQ01S012154.1                    187938 20 -    189561 ----G--A------A----G------ATT-G---TGA---G--------A---GAAG-------A----A----------T---------
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 1 I 12
s Glis_glis.GliGli_scaffold_79770                           17226 23 -     18683 GA-AG--A------A----G------AAT-A---TGA---G--------A---GAAG-------A----A----------T---------
i Glis_glis.GliGli_scaffold_79770                       C 0 I 12
s Gorilla_beringei.k141_111300                              10012 32 -     14630 AA--G--A------A----G------AAT-A---AGA---G--------A------G-------A----ACC------TTTAAAAAGACA
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119657112 32 - 195582420 aa--g--a------a----g------aat-a---aGA---G--------A------G-------A----Acc------tttaaaaagaca
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   80543 19 +    118900 --------------------------AAT-A---TGA---G-----GTAA---GAAC-------A----A----------T---------
i Graphiurus_murinus.GraMur_scaffold_4493               I 4 I 21
s Hapalemur_alaotrensis.k141_1280836                         6800 22 +     10286 -------A------A----G------AAT-A---TGA---G--------C------A-------A----A--GAAGAA--T---------
i Hapalemur_alaotrensis.k141_1280836                    I 1 I 12
s Hapalemur_gilberti.k141_279011                             5278 25 -     11661 AA--G--A------A----G------AAT-A---TGA---G--------C------A-------A----A--GAAGAA--T---------
i Hapalemur_gilberti.k141_279011                        I 1 I 12
s Hapalemur_griseus.k141_1387522                            10604 23 +     56096 ----G--A------A----G------AAT-A---TGA---G--------C------A-------A----A--GAAGAA--T---------
i Hapalemur_griseus.k141_1387522                        C 0 I 12
s Hapalemur_meridionalis.k141_186231                        33853 23 -     42470 ----G--A------A----G------AAT-A---TGA---G--------C------A-------A----A--GAAGAA--T---------
i Hapalemur_meridionalis.k141_186231                    C 0 I 12
s Hapalemur_occidentalis.k141_797938                        50477 25 -     54384 AA--G--A------A----G------AAT-A---TGA---G--------C------A-------A----A--GAAGAA--T---------
i Hapalemur_occidentalis.k141_797938                    I 1 I 12
s Helogale_parvula.HelPar_flattened_line_22962              24233 11 +     53719 --------------A----G------AAT-G---TGA---G--------A----------------------------------------
i Helogale_parvula.HelPar_flattened_line_22962          C 0 I 16
s Hemitragus_hylocrius.HemHyl_scaffold_16669                35068 20 -     91191 ----G--A------A----G------ATG-A---TGA---G--------A---GAGG-------A----A----------T---------
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 1 I 12
s Heterocephalus_glaber.JH602058.1                        2561398 23 +  31725842 ga-ag--a------a----a------aat-a---tga---g--------a---caag-------A----A----------T---------
i Heterocephalus_glaber.JH602058.1                      C 0 I 12
s Heterohyrax_brucei.HetBruBak_scaffold_25354               63629 26 +     73687 GA-GG--A------A----A------AAC-A---TGAACAA--------AAAA---A-------A----A----------C---------
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 I 12
s Hippopotamus_amphibius.HipAmp_scaffold_1308              152281 20 +    277961 ----G--A------A----G------ATT-A---TGA---G--------A---GAAG-------A----A----------T---------
i Hippopotamus_amphibius.HipAmp_scaffold_1308           I 1 I 12
s Hipposideros_armiger.JXIK01001085.1                      285326 11 -    477199 ----g--a------a----g------aat-g---TGA-----------------------------------------------------
i Hipposideros_armiger.JXIK01001085.1                   I 1 I 16
s Hipposideros_galeritus.HipGal_scaffold_52959               3012 11 +     26078 ----G--A------A----G------AAT-G---TGA-----------------------------------------------------
i Hipposideros_galeritus.HipGal_scaffold_52959          I 1 I 16
s Hoolock_leuconedys.ctg79                                      9923 32 -   7690867 AA--G--A------A----G------AAT-A---AGA---G--------T------G-------A----ACC------TTTAAAAAGACA
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 24672 11 -     67322 --------------A----G------ATT-A---TGA---G--------A----------------------------------------
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 I 15
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           21973  8 -    119109 ---------------------------AT-A---TGA---A--------A----------------------------------------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       I 8 I 17
s Hylobates_abbotti.k141_1816750                             2494 32 +      3202 AA--G--A------A----G------AAT-A---AGA---G--------T------G-------A----ACC------TTTAAAAAGACA
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1136966                               503 32 +      9785 AA--G--A------A----G------AAT-A---AGA---G--------T------G-------A----ACC------TTTAAAAAGACA
i Hylobates_agilis.k141_1136966                         C 0 C 0
s Hylobates_klossii.k141_468230                              3983 32 +      5464 AA--G--A------A----G------AAT-A---AGA---G--------T------G-------A----ACC------TTTAAAAAGACA
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14629329 32 -  25970782 AA--G--A------A----G------AAT-A---AGA---G--------T------G-------A----ACC------TTTAAAAAGACA
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            1881 32 +      4161 AA--G--A------A----G------AAT-A---AGA---G--------T------G-------A----ACC------TTTAAAAAGACA
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                    10290 23 +     22540 GA-AG--A------A----C------AGT-A---TGG---G--------A---GAAG-------A----A----------T---------
i Hystrix_cristata.HysCri_scaffold_50788                C 0 I 12
s Ictidomys_tridecemlineatus.JH393315.1                   7131123 23 +  13083262 GT-AG--A------A----G------AAT-A---TGA---A--------A---GAAT-------A----A----------T---------
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 I 12
s Indri_indri.k141_2197838                                   2337 25 +      3484 AA--G--A------A----G------AAT-A---TGA---G--------A------A-------A----A--GAAGAA--T---------
i Indri_indri.k141_2197838                              I 1 I 12
s Inia_geoffrensis.IniGeo_flattened_line_66725              14453 20 +     17520 ----G--A------A----G------ATC-A---TGA---G--------A---GAAG-------A----A----------T---------
i Inia_geoffrensis.IniGeo_flattened_line_66725          I 1 I 12
s Jaculus_jaculus.JH725517.1                              8579919 25 +  11848649 ga-aa--g------a----g------aat-a---tga---gag------a---gaag-------a----a----------t---------
i Jaculus_jaculus.JH725517.1                            C 0 I 12
s Kogia_breviceps.KogBre_flattened_line_35920               29072 20 +     37189 ----G--A------A----G------ATT-A---TGA---G--------A---GAAG-------A----A----------T---------
i Kogia_breviceps.KogBre_flattened_line_35920           I 1 I 12
s Lagothrix_lagothricha.k141_12968                          54780 19 -    147782 AA--G--A------A----G------AAT-A---TTA---G--------A------G-------A----A----------T---------
i Lagothrix_lagothricha.k141_12968                      C 0 I 12
s Lasiurus_borealis.LasBor_scaffold_59542                    7162 20 +     26176 ----G--A------A----A------AAT-A---GGA---G--------A---GATG-------A----A----------T---------
i Lasiurus_borealis.LasBor_scaffold_59542               I 24 I 8
s Lemur_catta.scaffold_1                                258412155 25 - 285822530 AA--G--A------A----G------AAT-A---TGA---G--------C------A-------A----A--GAAGAA--T---------
i Lemur_catta.scaffold_1                                I 1 I 12
s Lepilemur_ankaranensis.k141_884009                        29479 25 +     39228 AA--G--A------A----G------AAT-A---TGA---G--------A------A-------A----A--GAAGAA--T---------
i Lepilemur_ankaranensis.k141_884009                    I 1 I 12
s Lepilemur_dorsalis.k141_134267                            58843 25 +     63517 AA--G--A------A----G------AAT-A---TGA---G--------A------A-------A----A--GAAGAA--T---------
i Lepilemur_dorsalis.k141_134267                        I 1 I 12
s Lepilemur_ruficaudatus.k141_574529                        37225 25 -     38897 AA--G--A------A----G------AAT-A---TGA---G--------A------A-------A----A--GAAGAA--T---------
i Lepilemur_ruficaudatus.k141_574529                    I 1 I 12
s Lepilemur_septentrionalis.k141_710646                      3269 25 -     13103 AA--G--A------A----G------AAT-A---TGA---G--------A------A-------A----A--GAAGAA--T---------
i Lepilemur_septentrionalis.k141_710646                 I 1 I 12
s Leptonychotes_weddellii.KB714749.1                      3092987 11 -   3498232 --------------A----T------AAT-G---TGA---G--------A----------------------------------------
i Leptonychotes_weddellii.KB714749.1                    C 0 I 16
s Lepus_americanus.LepAme_scaffold_62849                    21760 24 +     22452 T---T--A------A----G------AAT-A---TTA---G--------AGATGAAG-------A----A----------T---------
i Lepus_americanus.LepAme_scaffold_62849                C 0 I 12
s Lipotes_vexillifer.KE558548.1                            141394 20 +   3060487 ----G--A------A----G------ATT-A---TGA---G--------A---GAAG-------A----A----------T---------
i Lipotes_vexillifer.KE558548.1                         C 0 I 12
s Lophocebus_aterrimus.ctg55                             19253217 20 +  19376315 AA--G--A------A----G------AAG-A---AGA---G--------A------G-------A----AGC------------------
i Lophocebus_aterrimus.ctg55                            C 0 I 49
s Loris_lydekkerianus.k141_550999                           16016 14 +     84689 AA--G--A------A----G------AAT-A---TGA---G-------------------------------------------------
i Loris_lydekkerianus.k141_550999                       I 1 I 20
s Loris_tardigradus.ctg97                                 3783752 13 +   6799190 -A--A--A------A----G------AAT-A---TGA---G-------------------------------------------------
i Loris_tardigradus.ctg97                               C 0 I 20
s Loxodonta_africana.GL010040.1                          20599549 23 -  62548349 GA-AG--A------A----G------AAT-A---TGA---G--------A---GAAG-------A----A----------T---------
i Loxodonta_africana.GL010040.1                         C 0 I 12
s Lycaon_pictus.CM007556.1                               11096746 11 +  39895028 --------------A----G------AAT-G---TGA---G--------A----------------------------------------
i Lycaon_pictus.CM007556.1                              I 11 I 16
s Macaca_arctoides.k141_2201161                             24966 20 +     74745 AA--G--A------A----G------AAG-A---AGA---G--------A------C-------A----ATC------------------
i Macaca_arctoides.k141_2201161                         C 0 I 49
s Macaca_assamensis.Contig65                             12711429 20 +  12821369 AA--G--A------A----G------AAG-A---AGA---G--------A------C-------A----ATC------------------
i Macaca_assamensis.Contig65                            C 0 I 49
s Macaca_cyclopis.k119_883699                                4002 20 -     26467 AA--G--A------A----G------AAG-A---AGA---G--------A------G-------A----ATC------------------
i Macaca_cyclopis.k119_883699                           C 0 I 49
s Macaca_fascicularis.k141_155037                           51873 20 +     63263 AA--G--A------A----G------AAG-A---AGA---G--------A------G-------A----ATC------------------
i Macaca_fascicularis.k141_155037                       C 0 I 49
s Macaca_fuscata.k119_938422                                 3983 20 -     26361 AA--G--A------A----G------AAG-A---AGA---G--------A------G-------A----ATC------------------
i Macaca_fuscata.k119_938422                            C 0 I 49
s Macaca_leonina.k141_467472                                 7173 23 -      7381 AA--G--A------A----G------AAG-A---AGA---G--------A------G-------A----ATC------TTT---------
i Macaca_leonina.k141_467472                            C 0 N 0
s Macaca_maura.k141_251854                                  50402 20 -     79256 AA--G--A------A----G------AAG-A---AGA---G--------A------G-------A----ATC------------------
i Macaca_maura.k141_251854                              C 0 I 49
s Macaca_mulatta.NC_041755.1                            196040500 20 + 196197964 aa--g--a------a----g------aag-a---aga---g--------a------g-------a----atc------------------
i Macaca_mulatta.NC_041755.1                            C 0 I 49
s Macaca_nemestrina.KQ004885.1                           11450670 20 +  11645122 aa--g--a------a----g------aag-a---aga---g--------a------g-------a----atc------------------
i Macaca_nemestrina.KQ004885.1                          C 0 I 49
s Macaca_nigra.k141_282495                                   9356 20 -     46448 AA--G--A------A----G------AAG-A---AGA---G--------A------G-------A----ATC------------------
i Macaca_nigra.k141_282495                              C 0 I 49
s Macaca_radiata.k141_3680256                                7017 20 -     13212 AA--G--A------A----G------AAG-A---AGA---G--------A------C-------A----ATC------------------
i Macaca_radiata.k141_3680256                           C 0 I 49
s Macaca_siberu.k141_741907                                 20699 20 -     55006 AA--G--A------A----G------AAG-A---AGA---G--------A------G-------A----ATC------------------
i Macaca_siberu.k141_741907                             C 0 I 49
s Macaca_silenus.Contig12                                43845814 20 +  43892939 AA--G--A------A----G------AAG-A---AGA---G--------A------G-------A----ATC------------------
i Macaca_silenus.Contig12                               C 0 I 356
s Macaca_thibetana.k99_662710                               21983 20 -     24607 AA--G--A------A----G------AAG-A---AGA---G--------A------C-------A----ATC------------------
i Macaca_thibetana.k99_662710                           C 0 I 49
s Macaca_tonkeana.k141_2870633                               9353 20 -     27140 AA--G--A------A----G------AAG-A---AGA---G--------A------G-------A----ATC------------------
i Macaca_tonkeana.k141_2870633                          C 0 I 49
s Macroglossus_sobrinus.MacSob_scaffold_4376               200643 15 +    248908 ----G--C------A----G------GTT-C---TGA---G--------G------G-------A-------------------------
i Macroglossus_sobrinus.MacSob_scaffold_4376            I 114 I 13
s Mandrillus_leucophaeus.scaffold125                     43442389 20 -  43563597 AA--G--A------A----G------AAG-A---AGA---G--------A------G-------A----AGC------------------
i Mandrillus_leucophaeus.scaffold125                    C 0 I 49
s Mandrillus_sphinx.Contig144                             4455192 20 -   4543643 AA--G--A------A----G------AAG-A---AGA---G--------A------G-------A----AGC------------------
i Mandrillus_sphinx.Contig144                           C 0 I 49
s Manis_javanica.JSZB01003966.1                            153740 20 +    252755 ----g--g------a----g------aac-a---tga---a--------a---gaaa-------a----a----------t---------
i Manis_javanica.JSZB01003966.1                         I 20 I 12
s Manis_pentadactyla.KN017078.1                             41337 20 +     58827 ----G--g------a----g------aac-a---tga---a--------a---gaaa-------a----a----------t---------
i Manis_pentadactyla.KN017078.1                         I 20 I 12
s Marmota_marmota.CZRN01000005.1                         36878990 23 +  64221397 gt-aa--a------a----g------aat-a---tga---a--------a---gaat-------a----a----------T---------
i Marmota_marmota.CZRN01000005.1                        C 0 I 12
s Megaderma_lyra.MegLyr_scaffold_3562                       67252 20 -    234502 ----G--G------A----G------GAT-T---TGA---G--------A---GAAG-------A----A----------T---------
i Megaderma_lyra.MegLyr_scaffold_3562                   I 1 I 12
s Mellivora_capensis.MelCap_flattened_line_15433             8139 11 -     87323 --------------A----G------AAT-G---TGA---G--------A----------------------------------------
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 I 16
s Meriones_unguiculatus.MerUng_scaffold_9483                 2975 15 +    115071 AA-AG--A------A----G------GAA-A---TGA---G-------------------------------------------------
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 I 15
s Mesocricetus_auratus.KB708139.1                         1052567 15 -  26018355 -T-TG--A------A----G------AAA-A---TGA---G--------T----------------------------------------
i Mesocricetus_auratus.KB708139.1                       C 0 I 19
s Mesoplodon_bidens.MesBid_scaffold_96348                    4047 20 -     12939 ----G--A------A----G------ATT-A---TGA---G--------A---GAAG-------A----A----------T---------
i Mesoplodon_bidens.MesBid_scaffold_96348               I 1 I 12
s Microcebus_murinus.CM007691.1                          16515203 25 +  47401472 AA--G--A------a----g------aat-a---tca---g--------a------a-------a----a--gaagaa--t---------
i Microcebus_murinus.CM007691.1                         I 1 I 12
s Microgale_talazaci.MicTal_scaffold_34660                  42232 23 -     48017 --------------A----G------GAT-A---TGA---G--------A---GAAGATATAAGA-------------------------
i Microgale_talazaci.MicTal_scaffold_34660              I 24 I 11
s Micronycteris_hirsuta.MicHir_scaffold_37978               26574 18 -     32043 --------------A----G------AAT-A---TGA---G--------G---GAAG-------A----A----------T---------
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 I 12
s Microtus_ochrogaster.CM001673.1                        22825557 11 -  98408828 --------------t----g------aaa-a---tga---g--------a----------------------------------------
i Microtus_ochrogaster.CM001673.1                       C 0 I 18
s Miniopterus_natalensis.LDJU01000022.1                   8214923 20 +  10048721 ----G--C------A----G------AAT-A---TAA---G--------A---GACA-------A----A----------T---------
i Miniopterus_natalensis.LDJU01000022.1                 I 1 I 12
s Miniopterus_schreibersii.MinSch_scaffold_24116            39381 20 +     45743 ----G--C------A----G------AAT-A---TAA---G--------A---GACA-------A----A----------T---------
i Miniopterus_schreibersii.MinSch_scaffold_24116        I 1 I 12
s Miopithecus_ogouensis.k141_2935907                         6935 20 +     29742 AA--G--A------A----G------AAG-A---AGA---G--------A------G-------A----ACC------------------
i Miopithecus_ogouensis.k141_2935907                    C 0 I 49
s Mirounga_angustirostris.MirAng_flattened_line_8852        18483 11 -    104932 --------------A----T------AAT-G---TGA---G--------A----------------------------------------
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 I 16
s Mirza_zaza.k141_593947                                     5888 25 -     12809 AA--G--A------A----G------AAT-A---TGA---G--------A------A-------A----A--GAAGAA--T---------
i Mirza_zaza.k141_593947                                I 1 I 12
s Monodon_monoceros.MonMon_M_scaffold_5598                 151822 20 +    154973 ----G--A------A----G------ATT-A---TGA---G--------A---GAAG-------A----A----------T---------
i Monodon_monoceros.MonMon_M_scaffold_5598              I 1 I 12
s Mormoops_blainvillei.MorMeg_scaffold_2952                165090 18 +    265003 --------------A----G------ACT-A---TGA---G--------A--GGA-G-------A----A----------T---------
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 I 12
s Moschus_moschiferus.MosMos_scaffold_78805                  8617 20 -     19904 ----G--A------A----G------ATT-A---TGA---G--------A---GAAG-------A----A----------T---------
i Moschus_moschiferus.MosMos_scaffold_78805             I 1 I 12
s Mungos_mungo.MunMun_flattened_line_8729                  151973 11 -    168139 --------------A----G------AAT-G---TGA---G--------A----------------------------------------
i Mungos_mungo.MunMun_flattened_line_8729               C 0 I 16
s Murina_feae.MurFea_scaffold_2254                          25917 17 -    100666 -------------------G------AAT-A---GGA---G--------A---GATG-------A----G----------T---------
i Murina_feae.MurFea_scaffold_2254                      I 1 I 12
s Mus_caroli.LT608236.1                                  70772810 16 +  92629107 aa-ag--a------a----g------aaa-a---tga---g--------a----------------------------------------
i Mus_caroli.LT608236.1                                 C 0 I 18
s Mus_musculus.chr16                                     75494862 16 +  98207768 aa-ag--a------a----g------aaa-a---tga---g--------a----------------------------------------
i Mus_musculus.chr16                                    C 0 I 18
s Mus_pahari.LT608305.1                                  67561614 16 +  89017189 aa-ag--a------a----g------aaa-a---tga---g--------a----------------------------------------
i Mus_pahari.LT608305.1                                 C 0 I 18
s Mus_spretus.CM004110.1                                 74337585 16 +  97876770 aa-ag--a------a----g------aaa-a---tga---g--------a----------------------------------------
i Mus_spretus.CM004110.1                                C 0 I 18
s Muscardinus_avellanarius.MusAve_scaffold_9643             15635 23 +     98495 GA-AG--A------A----G------AAT-A---TGA---G--------A---GAAC-------A----A----------T---------
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 I 12
s Mustela_putorius.JH417978.1                             4430240 11 -  28371801 --------------A----G------AAT-G---TGA---G--------A----------------------------------------
i Mustela_putorius.JH417978.1                           C 0 I 16
s Myocastor_coypus.MyoCoy_scaffold_3653                     96391  4 -    117718 GA-AG-------------------------------------------------------------------------------------
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 I 6
s Myotis_brandtii.KE161952.1                               972928 20 +   8389877 ----g--a------g----g------aat-a---gga---g--------a---gatg-------a----g----------T---------
i Myotis_brandtii.KE161952.1                            I 1 I 12
s Myotis_davidii.KB114863.1                               5024006 20 +   6462685 ----g--a------g----g------aat-a---gaa---g--------a---gatg-------a----g----------T---------
i Myotis_davidii.KB114863.1                             I 1 I 12
s Myotis_lucifugus.GL429887.1                             3470435 20 -   3747815 ----g--a------g----g------aat-a---gga---g--------a---gatg-------a----g----------T---------
i Myotis_lucifugus.GL429887.1                           I 1 I 12
s Myotis_myotis.MyoMyo_scaffold_6123                        15664 20 +     66751 ----G--A------G----G------AAT-A---GGA---G--------A---GATG-------A----G----------T---------
i Myotis_myotis.MyoMyo_scaffold_6123                    I 1 I 12
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             8412 26 -      8794 GA-AG--A------A----G------AAT-A---TGA---G--------AAAA---G-------A-GAAA----------T---------
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 I 12
s Nasalis_larvatus.k141_153429                              11264  3 +     48152 ------------------------------------------------------------------------------agt---------
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Nannospalax_galili.KL201303.1                            125293 14 +    362372 GA-AG--A------A----G------AAC-A---TGA-----------------------------------------------------
i Nannospalax_galili.KL201303.1                         I 1 I 16
s Neomonachus_schauinslandi.NINY01007774.1                4491874 11 -  14209539 --------------A----T------AAT-G---TGA---G--------A----------------------------------------
i Neomonachus_schauinslandi.NINY01007774.1              C 0 I 16
s Neophocaena_asiaeorientalis.KZ688543.1                  3956413 20 -   4490290 ----G--A------A----G------ATT-A---TGA---G--------A---GAAG-------A----T----------T---------
i Neophocaena_asiaeorientalis.KZ688543.1                I 1 I 12
s Noctilio_leporinus.NocLep_scaffold_12062                  52404 18 +     94413 --------------A----G------AAT-A---CGA---G--------A---GAAG-------A----A----------T---------
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 I 12
s Nomascus_annamensis.k141_762468                            1000 32 -      2755 AA--G--A------A----G------AAT-A---AGA---G--------T------G-------A----ACC------CTTAAAAAGACA
i Nomascus_annamensis.k141_762468                       C 0 C 0
s Nomascus_concolor.k141_256540                              7621 21 -      8966 -----------------------------------GA---G--------T------G-------A----ACC------TTTAAAAAGACA
i Nomascus_concolor.k141_256540                         I 9 C 0
s Nomascus_gabriellae.k141_1400361                           1551 32 -      2203 AA--G--A------A----G------AAT-A---AGA---G--------T------G-------A----ACC------TTTAAAAAGACA
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_453                             6863 32 +     12787 AA--G--A------A----G------AAT-A---AGA---G--------T------G-------A----ACC------TTTAAAAAGACA
i Nomascus_siki_b.tarseq_453                        I 65 C 0
s Nomascus_siki_a.k141_421408                                  1465 32 +     16235 AA--G--A------A----G------AAT-A---AGA---G--------T------G-------A----ACC------TTTAAAAAGACA
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                39616 11 +   3668941 --------------A----G------AAT-G---TGA---G--------A----------------------------------------
i Nyctereutes_procyonoides.CAJHUB010000786.1            I 11 I 16
s Nycticebus_bengalensis.LG16                            65572787 14 -  95554990 AA--G--A------A----G------AAT-A---TGA---G-------------------------------------------------
i Nycticebus_bengalensis.LG16                           I 1 I 19
s Nycticebus_coucang.k141_6040852                             424 14 +      1868 AA--G--A------A----G------AAT-A---TGA---G-------------------------------------------------
i Nycticebus_coucang.k141_6040852                       I 1 I 19
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65680972 14 +  89412551 AA--G--A------A----G------AAT-A---TGA---G-------------------------------------------------
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     I 1 I 19
s Ochotona_princeps.JH802095.1                            5000831 26 -  23139505 TA-AG--A------A----G------AAA-A---TTA---G--------AGGTAAAG-------A----A----------G---------
i Ochotona_princeps.JH802095.1                          C 0 I 12
s Odobenus_rosmarus.KB229369.1                             686574 10 -   3126709 -------------------G------AAT-G---TGA---G--------A----------------------------------------
i Odobenus_rosmarus.KB229369.1                          C 0 I 16
s Odocoileus_virginianus.KZ101650.1                       1085595 17 +   1425656 -------------------G------ATT-A---CGA---G--------A---GAAG-------A----A----------T---------
i Odocoileus_virginianus.KZ101650.1                     I 1 I 12
s Okapia_johnstoni.LVCL01S0017931.1                         43662 16 +     78940 --------------------------ATT-A---TGA---G--------A---GAAG-------A----A----------T---------
i Okapia_johnstoni.LVCL01S0017931.1                     I 2 I 12
s Ondatra_zibethicus.OndZib_scaffold_6821                  131364 11 +    145789 --------------T----G------AAA-A---TGA---G--------A----------------------------------------
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 I 19
s Octodon_degus.JH651621.1                                3691731  4 +  10294119 ga-ag-------------------------------------------------------------------------------------
i Octodon_degus.JH651621.1                              C 0 I 5
s Onychomys_torridus.OnyTor_scaffold_12578                  44284 16 +     62360 AA-AG--A------A----G------AAA-G---TGA---G--------A----------------------------------------
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 I 15
s Orcinus_orca.KB316965.1                                 7230094 20 -   7562323 ----G--A------A----G------ATT-A---TGA---G--------A---GAAG-------A----A----------T---------
i Orcinus_orca.KB316965.1                               I 1 I 12
s Orycteropus_afer.OryAfe_flattened_line_13509              64945 23 -     66828 GA-AG--A------A----G------AAT-T---TGA---G--------A---GAAG-------A----A----------T---------
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 I 12
s Oryctolagus_cuniculus.CM000803.1                      141884776 24 + 163896628 T---T--A------A----G------AAT-A---TTA---G--------AGATGAAG-------A----A----------T---------
i Oryctolagus_cuniculus.CM000803.1                      C 0 I 12
s Otocyon_megalotis.JAEUCK010005121.1                      316753 11 -    505867 --------------A----G------AAT-G---TGA---G--------A----------------------------------------
i Otocyon_megalotis.JAEUCK010005121.1                   I 11 I 16
s Otolemur_crassicaudatus.k141_505435                        5915 21 -     53940 AG--G--A------A----G------AAT-A---TGA---G--------A------G-------G----A--GA------A---------
i Otolemur_crassicaudatus.k141_505435                   I 1 I 12
s Otolemur_garnettii.GL873528.1                          18013884 21 -  38779656 ag--a--a------a----g------aat-a---tGA---G--------A------G-------G----A--GA------A---------
i Otolemur_garnettii.GL873528.1                         I 1 I 9
s Ovis_aries.CM001582.2                                 134084850 20 - 275406953 ----G--A------A----G------ATG-A---TGA---G--------A---GAGG-------A----A----------T---------
i Ovis_aries.CM001582.2                                 C 0 I 12
s Ovis_canadensis.OviCan_scaffold_6251                      86091 20 +    140051 ----G--A------A----G------ATG-A---TGA---G--------A---GAAG-------A----A----------T---------
i Ovis_canadensis.OviCan_scaffold_6251                  I 1 I 12
s Pan_paniscus.CM003386.1                               127579291 32 - 205426864 aa--g--a------a----g------aat-a---aGA---G--------A------G-------A----Acc------tttaaaaagaca
i Pan_paniscus.CM003386.1                               I 65 C 0
s Pan_troglodytes.CM009241.2                            120156451 32 - 196562556 aa--g--a------a----g------aat-a---aGA---G--------A------G-------A----Acc------tttaaaaagaca
i Pan_troglodytes.CM009241.2                            I 65 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  41519 11 +    295523 --------------A----G------AAT-G---TGA---G--------A----------------------------------------
i Panthera_onca.PanOnc_flattened_line_1615              C 0 I 16
s Panthera_pardus.KV860323.1                              3645335 11 +  18214204 --------------A----G------AAT-G---TGA---G--------A----------------------------------------
i Panthera_pardus.KV860323.1                            C 0 I 16
s Panthera_tigris.KE721879.1                              5034972 11 -   6340057 --------------A----G------AAT-G---TGA---G--------A----------------------------------------
i Panthera_tigris.KE721879.1                            C 0 I 16
s Pantholops_hodgsonii.KE114631.1                         1073723 20 -   1292953 ----G--A------A----G------ATT-A---TGA---G--------A---GAAG-------A----A----------T---------
i Pantholops_hodgsonii.KE114631.1                       I 1 I 12
s Papio_anubis.CM001492.2                               188161178 20 - 188283584 aa--g--a------a----g------aag-a---aaa---g--------a------g-------a----agc------------------
i Papio_anubis.CM001492.2                               C 0 I 49
s Papio_cynocephalus.k141_45376                              4268 20 +     25005 AA--G--A------A----G------AAG-A---AGA---G--------A------G-------A----AGC------------------
i Papio_cynocephalus.k141_45376                         C 0 I 49
s Papio_hamadryas.Contig15                               47518550 20 +  47705337 AA--G--A------A----G------AAG-A---AAA---G--------A------G-------A----AGC------------------
i Papio_hamadryas.Contig15                              C 0 I 49
s Papio_kindae.k141_5458022                                 72541 20 -    104429 AA--G--A------A----G------AAG-A---AGA---G--------A------G-------A----AGC------------------
i Papio_kindae.k141_5458022                             C 0 I 49
s Papio_papio.k141_979496                                   11073 20 +     14967 AA--G--A------A----G------AAG-A---AAA---G--------A------G-------A----AGC------------------
i Papio_papio.k141_979496                               C 0 I 49
s Papio_ursinus.k141_1345919                                 6938 20 -      7628 AA--G--A------A----G------AAG-A---AGA---G--------A------G-------A----AGC------------------
i Papio_ursinus.k141_1345919                            C 0 I 49
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    122995 11 -    135482 --------------A----G------AAT-G---TGA---G--------G----------------------------------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 I 16
s Perodicticus_ibeanus.k141_117958                          11578 14 -     23713 AA--G--A------A----G------AAT-A---TGA---G-------------------------------------------------
i Perodicticus_ibeanus.k141_117958                      I 1 I 20
s Perodicticus_potto.k141_1136815                           12729 14 +     61070 AA--G--A------A----G------AAT-A---TGA---G-------------------------------------------------
i Perodicticus_potto.k141_1136815                       I 1 I 20
s Perognathus_longimembris.PerPac_flattened_line_19359       3034 25 +     49596 -------------------G------AAT-A---TGA---AGGGAGAGGA--GGA-T-------A----A----------C---------
i Perognathus_longimembris.PerPac_flattened_line_19359  I 1 I 12
s Peromyscus_maniculatus.KI615458.1                       2840151 16 -   3366660 AC-GG--A------A----G------AAA-A---TGA---G--------A----------------------------------------
i Peromyscus_maniculatus.KI615458.1                     C 0 I 15
s Petromus_typicus.PetTyp_scaffold_33007                    17739 23 -     36578 GA-AG--A------A----G------AAT-A---TGA---G--------ATAA---A-------A----A----------T---------
i Petromus_typicus.PetTyp_scaffold_33007                C 0 I 12
s Phocoena_phocoena.PhoPho_flattened_line_53071              4554 20 +      8220 ----G--A------A----G------ATT-A---TGA---G--------A---GAAG-------A----T----------T---------
i Phocoena_phocoena.PhoPho_flattened_line_53071         I 1 I 12
s Piliocolobus_badius.k141_1987485                           4802  3 -      5908 ------------------------------------------------------------------------------agt---------
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       5421  3 -     17985 ------------------------------------------------------------------------------agt---------
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            4788  3 +      7694 ------------------------------------------------------------------------------agt---------
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26743271  3 +  26888534 ------------------------------------------------------------------------------AGT---------
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306           101180 20 +    112873 ----G--A------A----A------AAT-A---GGA---G--------A---GATG-------A----A----------T---------
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        I 1 I 4
s Platanista_gangetica.PlaMin_flattened_line_72990          11036 20 +     21690 ----G--A------A----G------ATT-A---TGA---G--------ACA-G--G-------A----A----------T---------
i Platanista_gangetica.PlaMin_flattened_line_72990      I 1 I 12
s Plecturocebus_bernhardi.k141_959214                       26871 19 +     44506 AA--G--A------A----G------AAT-A---TGA---T--------A------G-------A----A----------T---------
i Plecturocebus_bernhardi.k141_959214                   C 0 I 12
s Plecturocebus_brunneus.k141_498086                        27084 19 +     67491 AA--G--A------A----G------AAT-A---TGA---T--------A------G-------A----A----------T---------
i Plecturocebus_brunneus.k141_498086                    C 0 I 12
s Plecturocebus_caligatus.k141_2539816                      17323 19 -     98129 AA--G--A------A----G------AAT-A---TGA---T--------A------G-------A----A----------T---------
i Plecturocebus_caligatus.k141_2539816                  C 0 I 12
s Plecturocebus_cinerascens.k141_744510                     26924 19 +    147771 AA--G--A------A----G------AAT-A---TGA---T--------A------G-------A----A----------T---------
i Plecturocebus_cinerascens.k141_744510                 C 0 I 12
s Plecturocebus_cupreus.k141_1145860                         3559 19 -     43940 AA--G--A------A----G------AAT-A---TGA---T--------A------G-------A----A----------T---------
i Plecturocebus_cupreus.k141_1145860                    C 0 I 12
s Plecturocebus_dubius.k141_3565563                          7642 19 -     55515 AA--G--A------A----G------AAT-A---TGA---T--------A------G-------A----A----------T---------
i Plecturocebus_dubius.k141_3565563                     C 0 I 12
s Plecturocebus_grovesi.k141_242819                         26996 19 +    152463 AA--G--A------A----G------AAT-A---TGA---T--------A------G-------A----A----------T---------
i Plecturocebus_grovesi.k141_242819                     C 0 I 12
s Plecturocebus_hoffmannsi.k141_985533                       4804 19 -    119457 AA--G--A------A----G------AAT-A---TGA---T--------A------G-------A----A----------T---------
i Plecturocebus_hoffmannsi.k141_985533                  C 0 I 12
s Plecturocebus_miltoni.k141_841561                         16718 19 +    134592 AA--G--A------A----G------AAT-A---TGA---T--------A------G-------A----A----------T---------
i Plecturocebus_miltoni.k141_841561                     C 0 I 12
s Plecturocebus_moloch.k141_890597                          27306 19 -     75465 AA--G--A------A----G------AAT-A---TGA---T--------A------G-------A----A----------T---------
i Plecturocebus_moloch.k141_890597                      C 0 I 12
s Pongo_abelii.NDHI03003816.1                              191922 32 -    373494 AA--G--A------A----G------AAT-A---AGA---G--------A------G-------A----Acc------tttaaaaagaca
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19812569 32 +  19899266 AA--G--A------A----G------AAT-A---AGA---G--------A------G-------A----ACC------TTTAAAAAGACA
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               8546  3 -     15069 ------------------------------------------------------------------------------agt---------
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              8661  3 +     14865 ------------------------------------------------------------------------------agt---------
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                4735 24 -      9567 GA-GG--A------A----A------AGT-A---TGAACAA--------A---GAAA-------A-------------------------
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 I 12
s Prolemur_simus.MPIZ01000048.1                           6853526 25 +  12164890 AA--G--A------A----G------AAT-A---TGA---C--------C------A-------a----a--gaagaa--t---------
i Prolemur_simus.MPIZ01000048.1                         I 1 I 13
s Propithecus_coquerelli.NW_012147863.1                     22335 25 -     30946 NN--N--N------N----N------NNN-N---NNN---N--------N------N-------N----N--NNNNNN--N---------
i Propithecus_coquerelli.NW_012147863.1                 I 1 I 12
s Propithecus_coronatus.k141_1353159                         8631 25 +     11805 AA--G--A------A----G------AAT-A---TGA---G--------A------A-------A----A--GAAGAA--T---------
i Propithecus_coronatus.k141_1353159                    I 1 I 12
s Propithecus_diadema.k141_577245                           47965 25 +     52369 AA--G--A------A----G------AAT-A---TGA---G--------A------A-------A----A--GAAGAA--T---------
i Propithecus_diadema.k141_577245                       I 1 I 12
s Propithecus_edwardsi.k141_1317105                         40352 25 -     44753 AA--G--A------A----G------AAT-A---TGA---G--------A------A-------A----A--GAAGAA--T---------
i Propithecus_edwardsi.k141_1317105                     I 1 I 12
s Propithecus_perrieri.k141_7554                            22275 25 +     27322 AA--G--A------A----G------AAT-A---TGA---G--------A------A-------A----A--GAAGAA--T---------
i Propithecus_perrieri.k141_7554                        I 1 I 12
s Propithecus_tattersalli.k141_907138                       21920 25 -     53241 AA--G--A------A----G------AAT-A---TGA---G--------A------A-------A----A--GAAGAA--T---------
i Propithecus_tattersalli.k141_907138                   I 1 I 12
s Propithecus_verreauxi.k141_158021                         44183 25 -     48185 AA--G--A------A----G------AAT-A---TGA---G--------A------A-------A----A--GAAGAA--T---------
i Propithecus_verreauxi.k141_158021                     I 1 I 12
s Psammomys_obesus.NESX01026517.1                           39951 15 +     77221 aa-ag--a------a----g------gaa-a---tga---g-------------------------------------------------
i Psammomys_obesus.NESX01026517.1                       I 6 I 15
s Pteronotus_parnellii.KE867983.1                            7742 18 -     27784 --------------A----G------AAT-A---GGA---G--------A---GAAG-------A----A----------T---------
i Pteronotus_parnellii.KE867983.1                       C 0 I 12
s Pteronura_brasiliensis.PteBra_flattened_line_1343        251886 11 -    344369 --------------A----G------AAT-G---TGA---G--------A----------------------------------------
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 I 16
s Pteropus_alecto.KB030474.1                              8976934 20 -  19980961 ----G--C------A----G------GTT-C---TTA---G--------G------G-------AAGA-A----------A---------
i Pteropus_alecto.KB030474.1                            I 1 I 12
s Pteropus_vampyrus.KN525959.1                             606499 16 -   3946241 --------------------------ATT-G---TGA---A--------AAAA---G-------A----A----------T---------
i Pteropus_vampyrus.KN525959.1                          I 121 I 18
s Pygathrix_cinerea.k141_374971                             32651  3 +     56732 ------------------------------------------------------------------------------agt---------
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6809148  3 +   6970761 ------------------------------------------------------------------------------AGT---------
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             8537  3 +     18040 ------------------------------------------------------------------------------agt---------
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Puma_concolor.QAVW01000427.1                          131541459 11 - 161321710 --------------A----G------AAT-G---TGA---G--------A----------------------------------------
i Puma_concolor.QAVW01000427.1                          C 0 I 16
s Rangifer_tarandus.RanTarSib_scaffold_24239                22440 17 +     68503 -------------------G------ATT-A---CGA---G--------A---GAAG-------A----A----------T---------
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 1 I 12
s Rattus_norvegicus.chr11                                13918560  9 +  90463843 --------------------------gaa-a---tga---g--------t----------------------------------------
i Rattus_norvegicus.chr11                               I 4 I 18
s Rhinolophus_sinicus.LVEH01000179.1                      1794370 13 +   2252614 ---------------------------AT-A---TGA--GA--------A------G-------A----A----------T---------
i Rhinolophus_sinicus.LVEH01000179.1                    I 3 I 12
s Rhinopithecus_bieti.k119_554384                            2917  3 -     17045 ------------------------------------------------------------------------------agt---------
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206380404  3 - 206558726 ------------------------------------------------------------------------------AGT---------
i Rhinopithecus_roxellana.NC_044549.1                   N 0 C 0
s Rhinopithecus_strykeri.ctg4                            44859307  3 -  45163003 ------------------------------------------------------------------------------AGT---------
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_21814                3006 20 -     44886 ----G--C------A----G------GTT-C---TAA---G--------G------G-------AAGA-A----------A---------
i Rousettus_aegyptiacus.RouAeg_scaffold_21814           I 71 I 12
s Saiga_tatarica.SaiTat_scaffold_371890                      3120 20 -      4338 ----G--A------A----G------ATT-A---TGA---G--------A---GAAG-------A----A----------G---------
i Saiga_tatarica.SaiTat_scaffold_371890                 I 1 I 12
s Saimiri_boliviensis.NW_024100938.1                     15677332 12 -  43202129 ---------------------------AT-A---TGA---G--------A------G-------A----A----------T---------
i Saimiri_boliviensis.NW_024100938.1                    I 4 I 12
s Saimiri_cassiquiarensis.k141_808270                        9245 12 +     34089 ---------------------------AT-A---TGA---G--------A------G-------A----A----------T---------
i Saimiri_cassiquiarensis.k141_808270                   I 4 I 12
s Saimiri_macrodon.k141_2087127                              9185 12 -     60842 ---------------------------AT-A---TGA---G--------A------G-------A----A----------T---------
i Saimiri_macrodon.k141_2087127                         I 4 I 12
s Saimiri_oerstedii.k141_841116                              9279 12 +     67014 ---------------------------AT-A---TGA---G--------A------G-------A----A----------T---------
i Saimiri_oerstedii.k141_841116                         I 4 I 12
s Saimiri_sciureus.k141_1947592                              9256 12 +     60816 ---------------------------AT-A---TGA---G--------A------G-------A----A----------T---------
i Saimiri_sciureus.k141_1947592                         I 4 I 12
s Saimiri_ustus.k141_1282476                                 9193 12 -     76454 ---------------------------AT-A---TGA---G--------A------G-------A----A----------T---------
i Saimiri_ustus.k141_1282476                            I 4 I 12
s Sapajus_apella.ctg10                                   17345951 19 -  30362882 AA--G--A------A----G------AAT-A---TGA---G--------A------G-------A----A----------T---------
i Sapajus_apella.ctg10                                  C 0 I 12
s Sapajus_macrocephalus.k141_966464                         25272 19 -     62485 AA--G--A------A----G------AAT-A---TGA---G--------A------G-------A----A----------T---------
i Sapajus_macrocephalus.k141_966464                     C 0 I 12
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   41175 20 -    114521 ----A--A------A----G------AAT-A---CAA---G--------A---GAAT-------A----A----------T---------
i Scalopus_aquaticus.ScaAqu_scaffold_9300               I 1 I 6
s Semnopithecus_entellus.k141_1572367                        6153  3 +     15331 ------------------------------------------------------------------------------agt---------
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      11528  3 +     20762 ------------------------------------------------------------------------------agt---------
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         121532  3 +    130994 ------------------------------------------------------------------------------AGT---------
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           40312  3 +     46263 ------------------------------------------------------------------------------agt---------
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     33457  3 +     42640 ------------------------------------------------------------------------------agt---------
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        16479  3 +     30600 ------------------------------------------------------------------------------agt---------
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_966                    118324 16 +    343664 TA-AG--A------A----G------AAA-A---TGA---G--------A----------------------------------------
i Sigmodon_hispidus.SigHis_scaffold_966                 n 35 I 124
s Solenodon_paradoxus.SolPar_flattened_line_1012            25825 20 +    739146 ----G--A------A----G------AAT-A---TGA---G--------A---GAAG-------A----A----------T---------
i Solenodon_paradoxus.SolPar_flattened_line_1012        I 1 I 12
s Sorex_araneus.JH798170.1                               17776158 13 -  27805282 ----G--A------A----G------AAt-agaata------------------------------------------------------
i Sorex_araneus.JH798170.1                              I 3 I 14
s Spermophilus_dauricus.KZ294190.1                        2244824 23 +   2842873 GT-AG--A------A----G------AAT-A---TGA---A--------A---GAAT-------A----A----------T---------
i Spermophilus_dauricus.KZ294190.1                      C 0 I 12
s Spilogale_gracilis.SpiGra_flattened_line_905             240663 11 -    276980 --------------A----G------AAT-G---TGA---G--------A----------------------------------------
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 I 16
s Suricata_suricatta.SurSur_flattened_line_20339            34863 11 +     62062 --------------A----G------AAT-G---TGA---G--------A----------------------------------------
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 I 16
s Sus_scrofa.CM000824.4                                 189276860 18 + 218635234 --------------A----G------ATA-A---TGA---G--------A---GAAG-------A----A----------T---------
i Sus_scrofa.CM000824.4                                 C 0 I 12
s Symphalangus_syndactylus.tarseq_24                        19588 32 -  13920577 AA--G--A------A----G------AAT-A---AGA---G--------T------G-------A----ACC------TTTAAAAAGACA
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                3996 23 +     20549 ----G--A------A-TATG------AAT-A---TGA---G--------A---GAAG-------A----A----------T---------
i Tadarida_brasiliensis.TadBra_scaffold_61492           I 1 I 12
s Tamandua_tetradactyla.TamTet_scaffold_26877               18086 26 +     45698 GA-AG--A------A----G------AAT-A---TGA---G--------AAAA---G-------A-GAAA----------T---------
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 I 12
s Tapirus_indicus.TapInd_scaffold_176                      812446 20 +   1148477 ----G--A------A----G------AAT-A---TGC---G--------A---GAAG-------A----A----------T---------
i Tapirus_indicus.TapInd_scaffold_176                   I 7 I 12
s Tapirus_terrestris.TapTer_scaffold_14939                  63091 20 +     99546 ----G--C------A----G------AAT-A---TGC---G--------A---GAAG-------A----A----------T---------
i Tapirus_terrestris.TapTer_scaffold_14939              I 7 I 9
s Theropithecus_gelada.CM009951.1                       194012711 20 - 194193292 aa--g--a------a----g------aag-a---aga---g--------a------g-------a----agc------------------
i Theropithecus_gelada.CM009951.1                       C 0 I 49
s Tolypeutes_matacus.TolMat_scaffold_475685                  1274 26 -      3104 GA-AG--A------A----G------AAT-T---TGA---G--------A---GAAG-------A-GAAA----------T---------
i Tolypeutes_matacus.TolMat_scaffold_475685             C 0 I 12
s Tonatia_saurophila.TonSau_scaffold_3334                  139749 18 -    259118 --------------A----G------AAT-G---TAA---G--------G---GAAG-------A----A----------T---------
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 I 12
s Trachypithecus_auratus.k141_738098                        29800  3 +     38948 ------------------------------------------------------------------------------agt---------
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   23360  3 -     32910 ------------------------------------------------------------------------------agt---------
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      5261  3 -     12939 ------------------------------------------------------------------------------agt---------
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       4689  3 -     14244 ------------------------------------------------------------------------------agt---------
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           46082  3 -     54611 ------------------------------------------------------------------------------agt---------
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        3883  3 -     11566 ------------------------------------------------------------------------------agt---------
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     6067  3 -     15592 ------------------------------------------------------------------------------agt---------
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          4719  3 +     14371 ------------------------------------------------------------------------------agt---------
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   3005  3 +     12481 ------------------------------------------------------------------------------agt---------
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        2986  3 -     24393 ------------------------------------------------------------------------------agt---------
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       8130  3 -     28054 ------------------------------------------------------------------------------agt---------
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44662914  3 -  44834318 ------------------------------------------------------------------------------AGT---------
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       5226  3 +     13828 ------------------------------------------------------------------------------agt---------
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                  10604 20 +     90398 ----G--A------A----G------ATT-A---TGA---G--------A---GAAG-------A----A----------T---------
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 I 13
s Trichechus_manatus.JH594618.1                          16090621 23 +  31416278 GA-AG--A------A----G------AAT-A---TGA---G--------A---GAAG-------A----A----------T---------
i Trichechus_manatus.JH594618.1                         C 0 I 12
s Tupaia_chinensis.KB320831.1                             2798578 11 -   3938065 --------------A----G------ACT-G---TAA---G--------A----------------------------------------
i Tupaia_chinensis.KB320831.1                           T 3315 I 3322
s Tupaia_tana.TupTan_flattened_line_68454                   10716 16 +     13056 AA-AG--A------A----T------ACT-G---TAA---G--------A----------------------------------------
i Tupaia_tana.TupTan_flattened_line_68454               C 0 I 7
s Tursiops_truncatus.MRVK01000923.1                      69318824 20 -  96451834 ----G--A------A----G------ATT-A---TGA---G--------A---GAAG-------A----A----------T---------
i Tursiops_truncatus.MRVK01000923.1                     I 1 I 12
s Uropsilus_gracilis.UroGra_scaffold_4115                    1563 19 +    136657 ----G--A------A----G------AAT-A---TGA---A--------A---GATA-------A----C--------------------
i Uropsilus_gracilis.UroGra_scaffold_4115               I 1 I 11
s Ursus_maritimus.KK498671.1                              6522312 10 +  28682327 --------------A----G-------AT-G---TGA---G--------A----------------------------------------
i Ursus_maritimus.KK498671.1                            C 0 I 16
s Varecia_rubra.k141_432109                                 10196 25 -     20643 AA--G--A------A----A------AAT-A---TGA---G--------C------A-------A----A--GAAGAA--T---------
i Varecia_rubra.k141_432109                             I 1 I 12
s Varecia_variegata.k141_775891                             29731 25 -     33872 AA--G--A------A----A------AAT-A---TGA---G--------C------A-------A----A--GAAGAA--T---------
i Varecia_variegata.k141_775891                         I 1 I 12
s Vicugna_pacos.KN269600.1                                1529851 20 -   2331223 ----G--A------A----G------ATT-A---TGA---G--------A---GAAG-------A----A----------T---------
i Vicugna_pacos.KN269600.1                              I 1 I 12
s Vulpes_lagopus.VulLag_flattened_line_2045                145980 11 -    281493 --------------A----G------AAT-G---TGA---G--------A----------------------------------------
i Vulpes_lagopus.VulLag_flattened_line_2045             I 11 I 16
s Xerus_inauris.XerIna_scaffold_7898                       132320 23 -    134049 GT-AG--A------A----G------AAT-A---TGA---A--------A---GAAG-------A----A----------T---------
i Xerus_inauris.XerIna_scaffold_7898                    C 0 I 12
s Zalophus_californianus.ZalCal_flattened_line_4097        221434 11 -    227762 --------------A----G------AAT-G---TGA---G--------A----------------------------------------
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 I 16
s Zapus_hudsonius.ZapHud_scaffold_202118                     1993 23 -      3360 GA-AA--G------A----G------AAT-C---TGA---G--------G---GAAG-------A----A----------T---------
i Zapus_hudsonius.ZapHud_scaffold_202118                C 0 I 11
s Ziphius_cavirostris.ZipCav_flattened_line_60625            3409 20 -     13665 ----G--A------A----G------ATT-A---TGA---G--------A---GAAG-------A----A----------T---------
i Ziphius_cavirostris.ZipCav_flattened_line_60625       I 1 I 12
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Hylobates_pileatus_a.tarseq_592                             37267 2881 -     60944 I
e Tarsius_wallacei.k141_48636                               64696  0 +     65473 C
e Tarsius_lariang.k141_609102                               31387  0 +     42269 C
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Cephalopachus_bancanus.k141_702587                        12545  0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530  0 +    345090 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               18347 9 +    209709 ATTTTAGAT
s Gorilla_beringei.k141_111300                              10044 9 -     14630 ATTTTAGAT
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119657144 9 - 195582420 attttagat
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Hoolock_leuconedys.ctg79                                      9955 9 -   7690867 ATTTTAGAT
i Hoolock_leuconedys.ctg79                                 C 0 I 14
s Hylobates_abbotti.k141_1816750                             2526 9 +      3202 ATTTTTGAT
i Hylobates_abbotti.k141_1816750                        C 0 I 14
s Hylobates_agilis.k141_1136966                               535 9 +      9785 ATTTTTGAT
i Hylobates_agilis.k141_1136966                         C 0 I 14
s Hylobates_klossii.k141_468230                              4015 9 +      5464 ATTTTAGAT
i Hylobates_klossii.k141_468230                         C 0 I 14
s Hylobates_pileatus_b.ContigUN                                 14629361 9 -  25970782 ATTTTAGGT
i Hylobates_pileatus_b.ContigUN                                C 0 I 14
s Hylobates_muelleri.k141_1139146                            1913 9 +      4161 ATTTTAGAT
i Hylobates_muelleri.k141_1139146                       C 0 I 14
s Nomascus_annamensis.k141_762468                            1032 9 -      2755 ATTTTAGAT
i Nomascus_annamensis.k141_762468                       C 0 I 14
s Nomascus_concolor.k141_256540                              7642 9 -      8966 ATTTTAGGT
i Nomascus_concolor.k141_256540                         C 0 I 14
s Nomascus_gabriellae.k141_1400361                           1583 9 -      2203 ATTTTAGAT
i Nomascus_gabriellae.k141_1400361                      C 0 I 14
s Nomascus_siki_b.tarseq_453                             6895 9 +     12787 ATTTTAGAT
i Nomascus_siki_b.tarseq_453                        C 0 I 14
s Nomascus_siki_a.k141_421408                                  1497 9 +     16235 ATTTTAGAT
i Nomascus_siki_a.k141_421408                             C 0 I 14
s Pan_paniscus.CM003386.1                               127579323 9 - 205426864 attttagat
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120156483 9 - 196562556 attttagat
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Pongo_abelii.NDHI03003816.1                              191954 9 -    373494 attttagat
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19812601 9 +  19899266 ATTTTAGAT
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        19620 9 -  13920577 ATTTTAGAT
i Symphalangus_syndactylus.tarseq_24                    C 0 I 14
e Eptesicus_fuscus.JH977687.1                             4710621 19 +   6522550 I
e Macroglossus_sobrinus.MacSob_scaffold_4376               200658 13 +    248908 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Petromus_typicus.PetTyp_scaffold_33007                    17762 12 -     36578 I
e Sorex_araneus.JH798170.1                               17776171 14 -  27805282 I
e Dinomys_branickii.DinBra_scaffold_1996                   160604 12 +    228994 I
e Erinaceus_europaeus.JH835290.1                         11543148 12 +  16010500 I
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           5451 12 -      6963 I
e Aplodontia_rufa.AprRuf_scaffold_101456                     3293 15 +     11424 I
e Oryctolagus_cuniculus.CM000803.1                      141884800 12 + 163896628 I
e Ochotona_princeps.JH802095.1                            5000857 12 -  23139505 I
e Lepus_americanus.LepAme_scaffold_62849                    21784 12 +     22452 I
e Perognathus_longimembris.PerPac_flattened_line_19359       3059 12 +     49596 I
e Dipodomys_stephensi.DipSte_scaffold_84338                  3431 12 -     11986 I
e Dipodomys_ordii.KN672545.1                              3661057 12 +   4240102 I
e Suricata_suricatta.SurSur_flattened_line_20339            34874 16 +     62062 I
e Chrysochloris_asiatica.ChrAsi_scaffold_954668              1692 11 -      1738 I
e Ziphius_cavirostris.ZipCav_flattened_line_60625            3429 12 -     13665 I
e Zalophus_californianus.ZalCal_flattened_line_4097        221445 16 -    227762 I
e Vulpes_lagopus.VulLag_flattened_line_2045                145991 16 -    281493 I
e Vicugna_pacos.KN269600.1                                1529871 12 -   2331223 I
e Ursus_maritimus.KK498671.1                              6522322 16 +  28682327 I
e Uropsilus_gracilis.UroGra_scaffold_4115                    1582 11 +    136657 I
e Tursiops_truncatus.MRVK01000923.1                      69318844 12 -  96451834 I
e Trichechus_manatus.JH594618.1                          16090644 12 +  31416278 I
e Tragulus_javanicus.TraJav_scaffold_14717                  10624 13 +     90398 I
e Tonatia_saurophila.TonSau_scaffold_3334                  139767 12 -    259118 I
e Tolypeutes_matacus.TolMat_scaffold_475685                  1300 12 -      3104 I
e Tapirus_terrestris.TapTer_scaffold_14939                  63111 9 +     99546 I
e Tapirus_indicus.TapInd_scaffold_176                      812466 12 +   1148477 I
e Tamandua_tetradactyla.TamTet_scaffold_26877               18112 12 +     45698 I
e Tadarida_brasiliensis.TadBra_scaffold_61492                4019 12 +     20549 I
e Sus_scrofa.CM000824.4                                 189276878 12 + 218635234 I
e Spilogale_gracilis.SpiGra_flattened_line_905             240674 16 -    276980 I
e Solenodon_paradoxus.SolPar_flattened_line_1012            25845 12 +    739146 I
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   41195 6 -    114521 I
e Saiga_tatarica.SaiTat_scaffold_371890                      3140 12 -      4338 I
e Rousettus_aegyptiacus.RouAeg_scaffold_21814                3026 12 -     44886 I
e Rhinolophus_sinicus.LVEH01000179.1                      1794383 12 +   2252614 I
e Rangifer_tarandus.RanTarSib_scaffold_24239                22457 12 +     68503 I
e Puma_concolor.QAVW01000427.1                          131541470 16 - 161321710 I
e Pteropus_vampyrus.KN525959.1                             606515 18 -   3946241 I
e Pteropus_alecto.KB030474.1                              8976954 12 -  19980961 I
e Pteronura_brasiliensis.PteBra_flattened_line_1343        251897 16 -    344369 I
e Pteronotus_parnellii.KE867983.1                            7760 12 -     27784 I
e Procavia_capensis.ProCapCap_scaffold_149274                4759 12 -      9567 I
e Platanista_gangetica.PlaMin_flattened_line_72990          11056 12 +     21690 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306           101200 4 +    112873 I
e Phocoena_phocoena.PhoPho_flattened_line_53071              4574 12 +      8220 I
e Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    123006 16 -    135482 I
e Pantholops_hodgsonii.KE114631.1                         1073743 12 -   1292953 I
e Panthera_tigris.KE721879.1                              5034983 16 -   6340057 I
e Panthera_pardus.KV860323.1                              3645346 16 +  18214204 I
e Panthera_onca.PanOnc_flattened_line_1615                  41530 16 +    295523 I
e Ovis_canadensis.OviCan_scaffold_6251                      86111 12 +    140051 I
e Ovis_aries.CM001582.2                                 134084870 12 - 275406953 I
e Otocyon_megalotis.JAEUCK010005121.1                      316764 16 -    505867 I
e Orycteropus_afer.OryAfe_flattened_line_13509              64968 12 -     66828 I
e Orcinus_orca.KB316965.1                                 7230114 12 -   7562323 I
e Okapia_johnstoni.LVCL01S0017931.1                         43678 12 +     78940 I
e Odocoileus_virginianus.KZ101650.1                       1085612 12 +   1425656 I
e Odobenus_rosmarus.KB229369.1                             686584 16 -   3126709 I
e Nyctereutes_procyonoides.CAJHUB010000786.1                39627 16 +   3668941 I
e Noctilio_leporinus.NocLep_scaffold_12062                  52422 12 +     94413 I
e Neophocaena_asiaeorientalis.KZ688543.1                  3956433 12 -   4490290 I
e Neomonachus_schauinslandi.NINY01007774.1                4491885 16 -  14209539 I
e Myrmecophaga_tridactyla.MyrTri_scaffold_137280             8438 12 -      8794 I
e Myotis_myotis.MyoMyo_scaffold_6123                        15684 12 +     66751 I
e Myotis_lucifugus.GL429887.1                             3470455 12 -   3747815 I
e Myotis_davidii.KB114863.1                               5024026 12 +   6462685 I
e Myotis_brandtii.KE161952.1                               972948 12 +   8389877 I
e Mustela_putorius.JH417978.1                             4430251 16 -  28371801 I
e Murina_feae.MurFea_scaffold_2254                          25934 12 -    100666 I
e Mungos_mungo.MunMun_flattened_line_8729                  151984 16 -    168139 I
e Moschus_moschiferus.MosMos_scaffold_78805                  8637 12 -     19904 I
e Mormoops_blainvillei.MorMeg_scaffold_2952                165108 12 +    265003 I
e Monodon_monoceros.MonMon_M_scaffold_5598                 151842 12 +    154973 I
e Mirounga_angustirostris.MirAng_flattened_line_8852        18494 16 -    104932 I
e Miniopterus_schreibersii.MinSch_scaffold_24116            39401 12 +     45743 I
e Miniopterus_natalensis.LDJU01000022.1                   8214943 12 +  10048721 I
e Micronycteris_hirsuta.MicHir_scaffold_37978               26592 12 -     32043 I
e Microgale_talazaci.MicTal_scaffold_34660                  42255 11 -     48017 I
e Mesoplodon_bidens.MesBid_scaffold_96348                    4067 12 -     12939 I
e Mellivora_capensis.MelCap_flattened_line_15433             8150 16 -     87323 I
e Megaderma_lyra.MegLyr_scaffold_3562                       67272 12 -    234502 I
e Manis_pentadactyla.KN017078.1                             41357 12 +     58827 I
e Manis_javanica.JSZB01003966.1                            153760 12 +    252755 I
e Lycaon_pictus.CM007556.1                               11096757 16 +  39895028 I
e Loxodonta_africana.GL010040.1                          20599572 12 -  62548349 I
e Lipotes_vexillifer.KE558548.1                            141414 12 +   3060487 I
e Leptonychotes_weddellii.KB714749.1                      3092998 16 -   3498232 I
e Lasiurus_borealis.LasBor_scaffold_59542                    7182 8 +     26176 I
e Kogia_breviceps.KogBre_flattened_line_35920               29092 12 +     37189 I
e Inia_geoffrensis.IniGeo_flattened_line_66725              14473 12 +     17520 I
e Hyaena_hyaena.HyaHya_flattened_line_20729                 24683 15 -     67322 I
e Hipposideros_galeritus.HipGal_scaffold_52959               3023 16 +     26078 I
e Hipposideros_armiger.JXIK01001085.1                      285337 16 -    477199 I
e Hippopotamus_amphibius.HipAmp_scaffold_1308              152301 12 +    277961 I
e Heterohyrax_brucei.HetBruBak_scaffold_25354               63655 12 +     73687 I
e Hemitragus_hylocrius.HemHyl_scaffold_16669                35088 12 -     91191 I
e Helogale_parvula.HelPar_flattened_line_22962              24244 16 +     53719 I
e Giraffa_tippelskirchi.LVKQ01S012154.1                    187958 12 -    189561 I
e Felis_nigripes.FelNig_flattened_line_8080                 28609 338 +     52776 I
e Felis_catus_fca126.CM031420.1                         129287506 251 - 158578461 I
e Eubalaena_japonica.EubJap_flattened_line_7756             66952 12 +     89355 I
e Eschrichtius_robustus.EscRob_flattened_line_685          320496 12 +    330699 I
e Equus_przewalskii.ATBW01073585.1                          17971 12 +     92910 I
e Equus_caballus.CM000402.2                              13356481 12 +  41866177 I
e Equus_asinus.JREZ01000062.1                             5857995 12 -   7175178 I
e Enhydra_lutris.KZ291749.1                              85879053 16 +  99434291 I
e Elephantulus_edwardii.JH947210.1                        7834934 10 +  15467074 I
e Elaphurus_davidianus.JRFZ01086400.1                     1498178 12 +   1727528 I
e Eidolon_helvum.AWHC01235761.1                              3731 12 -      8619 I
e Echinops_telfairi.JH980316.1                           23000688 11 -  44670279 I
e Diceros_bicornis.DicBicMic_scaffold_9545                   8766 12 +    151128 I
e Dicerorhinus_sumatrensis.PEKH010003161.1                 328132 12 +    993696 I
e Desmodus_rotundus.KZ672188.1                           18702854 12 -  18957592 I
e Delphinapterus_leucas.KZ290064.1                       80042249 12 -  96802777 I
e Dasypus_novemcinctus.JH568778.1                          186495 12 -   6883506 I
e Cryptoprocta_ferox.CryFer_flattened_line_19014            59127 16 -     70449 I
e Crocidura_indochinensis.CroInd_scaffold_27484              3657 12 -     22648 I
e Craseonycteris_thonglongyai.CraTho_scaffold_144252         4155 12 -      5782 I
e Condylura_cristata.JH655880.1                          60623762 12 +  78930452 I
e Choloepus_hoffmanni.KN194586.1                           764773 12 +    964067 I
e Choloepus_didactylus.ChoDid_scaffold_36182                19469 12 -     21363 I
e Ceratotherium_simum.JH767818.1                          4369733 12 +   7569818 I
e Catagonus_wagneri.CatWag_scaffold_1305                   164508 12 -    276539 I
e Carollia_perspicillata.CarPer_scaffold_4436               63638 12 +     67245 I
e Capra_hircus.CM004562.1                               135714050 12 - 157403528 I
e Capra_aegagrus.CM003214.1                              21335697 12 + 157394656 I
e Canis_lupus_orion.HG994411.1                           16464086 16 -  44759192 I
e Canis_lupus_familiaris.chr31                           11097301 16 +  39895921 I
e Canis_lupus_dingo.QKWQ01001993.1                       11274804 16 -  35597290 I
e Canis_lupus_VD.CanFam_VD_scaffold_16982                   22881 16 +     87036 I
e CanFam4.chr31                                          11527907 16 +  39901454 I
e Camelus_ferus.KB016973.1                                2978201 12 +   6889770 I
e Camelus_dromedarius.KN271192.1                           402463 12 -  15254737 I
e Camelus_bactrianus.KN276303.1                           3224763 12 -   8989139 I
e Bubalus_bubalis.KI419065.1                               676779 12 +   1914593 I
e Bos_taurus.CM000177.6                                  22667941 12 + 158972876 I
e Bos_mutus.JH883513.1                                     421468 12 +    998990 I
e Bos_indicus.CM003021.1                                 22959289 12 + 161108492 I
e Bison_bison.KN264915.1                                   305183 12 -   6870073 I
e Beatragus_hunteri.BeaHun_scaffold_21644                   50233 12 -     72089 I
e Balaenoptera_bonaerensis.DF502048.1                       10825 12 -     13118 I
e Balaenoptera_acutorostrata.KI537095.1                  26385652 12 +  51448160 I
e Artibeus_jamaicensis.ArtJam_scaffold_41619                12644 12 -     29036 I
e Antilocapra_americana.AntAmePen_scaffold_27338             5425 12 +     55446 I
e Anoura_caudifer.AnoCau_scaffold_422                      394351 12 -    631301 I
e Ammotragus_lervia.NIVO01013474.1                        3528264 12 +   4113121 I
e Ailurus_fulgens.LNAC01000003.1                          7102003 17 -  16596857 I
e Ailuropoda_melanoleuca.LNAT01000321.1                  10665054 16 +  23371972 I
e Acinonyx_jubatus.LLWD01000356.1                         2041115 16 +   3721120 I
e Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           21981 17 -    119109 I
e Glis_glis.GliGli_scaffold_79770                           17249 12 -     18683 I
e Zapus_hudsonius.ZapHud_scaffold_202118                     2016 11 -      3360 I
e Jaculus_jaculus.JH725517.1                              8579944 12 +  11848649 I
e Hylobates_pileatus_a.tarseq_592                             37267 2881 -     60944 I
e Allactaga_bullata.AllBul_scaffold_141108                   2197 12 -      7259 I
e Galeopterus_variegatus.GalVar_scaffold_354               160352 12 +    324696 I
e Microtus_ochrogaster.CM001673.1                        22825568 18 -  98408828 I
e Xerus_inauris.XerIna_scaffold_7898                       132343 12 -    134049 I
e Varecia_variegata.k141_775891                             29756 12 -     33872 I
e Varecia_rubra.k141_432109                                 10221 12 -     20643 I
e Tupaia_tana.TupTan_flattened_line_68454                   10732 7 +     13056 I
e Tupaia_chinensis.KB320831.1                             2798589 3322 -   3938065 I
e Trachypithecus_pileatus.k141_1022309                       5229 0 +     13828 C
e Trachypithecus_phayrei.ctg3                            44662917 0 -  44834318 C
e Trachypithecus_obscurus.k141_1115109                       8133 0 -     28054 C
e Trachypithecus_melamera.k141_699241                        2989 0 -     24393 C
e Trachypithecus_leucocephalus.k141_381681                   3008 0 +     12481 C
e Trachypithecus_laotum.k141_760702                          4722 0 +     14371 C
e Trachypithecus_hatinhensis.k141_504423                     6070 0 -     15592 C
e Trachypithecus_germaini.k141_868450                        3886 0 -     11566 C
e Trachypithecus_geei.k141_670367                           46085 0 -     54611 C
e Trachypithecus_francoisi.k141_768164                       4692 0 -     14244 C
e Trachypithecus_cristatus.k141_1011511                      5264 0 -     12939 C
e Trachypithecus_crepusculus.k141_1588528                   23363 0 -     32910 C
e Trachypithecus_auratus.k141_738098                        29803 0 +     38948 C
e Theropithecus_gelada.CM009951.1                       194012731 49 - 194193292 I
e Tarsius_wallacei.k141_48636                               64696 0 +     65473 C
e Tarsius_lariang.k141_609102                               31387 0 +     42269 C
e Spermophilus_dauricus.KZ294190.1                        2244847 12 +   2842873 I
e Sigmodon_hispidus.SigHis_scaffold_966                    118340 124 +    343664 I
e Semnopithecus_vetulus.k141_1143185                        16482 0 +     30600 C
e Semnopithecus_schistaceus.k141_387461                     33460 0 +     42640 C
e Semnopithecus_priam.k141_410937                           40315 0 +     46263 C
e Semnopithecus_johnii.k141_785014                         121535 0 +    130994 C
e Semnopithecus_hypoleucos.k141_761524                      11531 0 +     20762 C
e Semnopithecus_entellus.k141_1572367                        6156 0 +     15331 C
e Sapajus_macrocephalus.k141_966464                         25291 12 -     62485 I
e Sapajus_apella.ctg10                                   17345970 12 -  30362882 I
e Saimiri_ustus.k141_1282476                                 9205 12 -     76454 I
e Saimiri_sciureus.k141_1947592                              9268 12 +     60816 I
e Saimiri_oerstedii.k141_841116                              9291 12 +     67014 I
e Saimiri_macrodon.k141_2087127                              9197 12 -     60842 I
e Saimiri_cassiquiarensis.k141_808270                        9257 12 +     34089 I
e Saimiri_boliviensis.NW_024100938.1                     15677344 12 -  43202129 I
e Rhinopithecus_strykeri.ctg4                            44859310 0 -  45163003 C
e Rhinopithecus_roxellana.NC_044549.1                   206380407 0 - 206558726 C
e Rhinopithecus_bieti.k119_554384                            2920 0 -     17045 C
e Rattus_norvegicus.chr11                                13918569 18 +  90463843 I
e Pygathrix_nigripes_a.k141_101123                             8540 0 +     18040 C
e Pygathrix_nigripes_b.ctg79                                 6809151 0 +   6970761 C
e Pygathrix_cinerea.k141_374971                             32654 0 +     56732 C
e Psammomys_obesus.NESX01026517.1                           39966 15 +     77221 I
e Propithecus_verreauxi.k141_158021                         44208 12 -     48185 I
e Propithecus_tattersalli.k141_907138                       21945 12 -     53241 I
e Propithecus_perrieri.k141_7554                            22300 12 +     27322 I
e Propithecus_edwardsi.k141_1317105                         40377 12 -     44753 I
e Propithecus_diadema.k141_577245                           47990 12 +     52369 I
e Propithecus_coronatus.k141_1353159                         8656 12 +     11805 I
e Propithecus_coquerelli.NW_012147863.1                     22360 12 -     30946 I
e Prolemur_simus.MPIZ01000048.1                           6853551 13 +  12164890 I
e Presbytis_mitrata.k141_860013                              8664 0 +     14865 C
e Presbytis_comata.k141_672698                               8549 0 -     15069 C
e Plecturocebus_moloch.k141_890597                          27325 12 -     75465 I
e Plecturocebus_miltoni.k141_841561                         16737 12 +    134592 I
e Plecturocebus_hoffmannsi.k141_985533                       4823 12 -    119457 I
e Plecturocebus_grovesi.k141_242819                         27015 12 +    152463 I
e Plecturocebus_dubius.k141_3565563                          7661 12 -     55515 I
e Plecturocebus_cupreus.k141_1145860                         3578 12 -     43940 I
e Plecturocebus_cinerascens.k141_744510                     26943 12 +    147771 I
e Plecturocebus_caligatus.k141_2539816                      17342 12 -     98129 I
e Plecturocebus_brunneus.k141_498086                        27103 12 +     67491 I
e Plecturocebus_bernhardi.k141_959214                       26890 12 +     44506 I
e Pithecia_vanzolinii.k141_831006                           15424 0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514 0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521 0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292 0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093 0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038 0 +     78826 C
e Pithecia_albicans.k141_991845                             45662 0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000036.1               26743274 0 +  26888534 C
e Piliocolobus_kirkii.k141_929665                            4791 0 +      7694 C
e Piliocolobus_gordonorum.k141_1270531                       5424 0 -     17985 C
e Piliocolobus_badius.k141_1987485                           4805 0 -      5908 C
e Peromyscus_maniculatus.KI615458.1                       2840167 15 -   3366660 I
e Perodicticus_potto.k141_1136815                           12743 20 +     61070 I
e Perodicticus_ibeanus.k141_117958                          11592 20 -     23713 I
e Papio_ursinus.k141_1345919                                 6958 49 -      7628 I
e Papio_papio.k141_979496                                   11093 49 +     14967 I
e Papio_kindae.k141_5458022                                 72561 49 -    104429 I
e Papio_hamadryas.Contig15                               47518570 49 +  47705337 I
e Papio_cynocephalus.k141_45376                              4288 49 +     25005 I
e Papio_anubis.CM001492.2                               188161198 49 - 188283584 I
e Otolemur_garnettii.GL873528.1                          18013905 9 -  38779656 I
e Otolemur_crassicaudatus.k141_505435                        5936 12 -     53940 I
e Onychomys_torridus.OnyTor_scaffold_12578                  44300 15 +     62360 I
e Ondatra_zibethicus.OndZib_scaffold_6821                  131375 19 +    145789 I
e Octodon_degus.JH651621.1                                3691735 5 +  10294119 I
e Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65680986 19 +  89412551 I
e Nycticebus_coucang.k141_6040852                             438 19 +      1868 I
e Nycticebus_bengalensis.LG16                            65572801 19 -  95554990 I
e Nasalis_larvatus.k141_153429                              11267 0 +     48152 C
e Nannospalax_galili.KL201303.1                            125307 16 +    362372 I
e Myocastor_coypus.MyoCoy_scaffold_3653                     96395 6 -    117718 I
e Muscardinus_avellanarius.MusAve_scaffold_9643             15658 12 +     98495 I
e Mus_spretus.CM004110.1                                 74337601 18 +  97876770 I
e Mus_pahari.LT608305.1                                  67561630 18 +  89017189 I
e Mus_musculus.chr16                                     75494878 18 +  98207768 I
e Mus_caroli.LT608236.1                                  70772826 18 +  92629107 I
e Mirza_zaza.k141_593947                                     5913 12 -     12809 I
e Miopithecus_ogouensis.k141_2935907                         6955 49 +     29742 I
e Microcebus_murinus.CM007691.1                          16515228 12 +  47401472 I
e Mesocricetus_auratus.KB708139.1                         1052582 19 -  26018355 I
e Meriones_unguiculatus.MerUng_scaffold_9483                 2990 15 +    115071 I
e Marmota_marmota.CZRN01000005.1                         36879013 12 +  64221397 I
e Mandrillus_sphinx.Contig144                             4455212 49 -   4543643 I
e Mandrillus_leucophaeus.scaffold125                     43442409 49 -  43563597 I
e Macaca_tonkeana.k141_2870633                               9373 49 -     27140 I
e Macaca_thibetana.k99_662710                               22003 49 -     24607 I
e Macaca_silenus.Contig12                                43845834 356 +  43892939 I
e Macaca_siberu.k141_741907                                 20719 49 -     55006 I
e Macaca_radiata.k141_3680256                                7037 49 -     13212 I
e Macaca_nigra.k141_282495                                   9376 49 -     46448 I
e Macaca_nemestrina.KQ004885.1                           11450690 49 +  11645122 I
e Macaca_mulatta.NC_041755.1                            196040520 49 + 196197964 I
e Macaca_maura.k141_251854                                  50422 49 -     79256 I
e Macaca_fuscata.k119_938422                                 4003 49 -     26361 I
e Macaca_fascicularis.k141_155037                           51893 49 +     63263 I
e Macaca_cyclopis.k119_883699                                4022 49 -     26467 I
e Macaca_assamensis.Contig65                             12711449 49 +  12821369 I
e Macaca_arctoides.k141_2201161                             24986 49 +     74745 I
e Loris_tardigradus.ctg97                                 3783765 20 +   6799190 I
e Loris_lydekkerianus.k141_550999                           16030 20 +     84689 I
e Lophocebus_aterrimus.ctg55                             19253237 49 +  19376315 I
e Lepilemur_septentrionalis.k141_710646                      3294 12 -     13103 I
e Lepilemur_ruficaudatus.k141_574529                        37250 12 -     38897 I
e Lepilemur_dorsalis.k141_134267                            58868 12 +     63517 I
e Lepilemur_ankaranensis.k141_884009                        29504 12 +     39228 I
e Lemur_catta.scaffold_1                                258412180 12 - 285822530 I
e Lagothrix_lagothricha.k141_12968                          54799 12 -    147782 I
e Indri_indri.k141_2197838                                   2362 12 +      3484 I
e Ictidomys_tridecemlineatus.JH393315.1                   7131146 12 +  13083262 I
e Hystrix_cristata.HysCri_scaffold_50788                    10313 12 +     22540 I
e Heterocephalus_glaber.JH602058.1                        2561421 12 +  31725842 I
e Hapalemur_occidentalis.k141_797938                        50502 12 -     54384 I
e Hapalemur_meridionalis.k141_186231                        33876 12 -     42470 I
e Hapalemur_griseus.k141_1387522                            10627 12 +     56096 I
e Hapalemur_gilberti.k141_279011                             5303 12 -     11661 I
e Hapalemur_alaotrensis.k141_1280836                         6822 12 +     10286 I
e Graphiurus_murinus.GraMur_scaffold_4493                   80562 21 +    118900 I
e Galagoides_demidoff.k141_1769638                          15578 12 +     27357 I
e Galago_senegalensis.k141_964197                           18435 13 -     43889 I
e Galago_moholi.ctg555                                     216074 13 -    847004 I
e Fukomys_damarensis.KN123630.1                          13896921 12 -  19261668 I
e Eulemur_sanfordi.k141_186399                              20822 12 -     29447 I
e Eulemur_rufus.k141_1620292                                38081 12 +     46535 I
e Eulemur_rubriventer.k141_411740                           23349 12 +     26808 I
e Eulemur_mongoz.k141_825972                                20893 12 +     27497 I
e Eulemur_macaco.k141_747087                                 4218 12 -     19505 I
e Eulemur_fulvus.k141_653297                                16235 12 +    109717 I
e Eulemur_flavifrons.k141_903901                            12750 12 +     60246 I
e Eulemur_coronatus.k141_3240342                            16428 12 +     36558 I
e Eulemur_collaris.k141_1015201                              3291 12 -      4292 I
e Eulemur_albifrons.k141_715837                             10032 12 +     13586 I
e Erythrocebus_patas.Contig8                             48781616 49 -  48907691 I
e Ellobius_talpinus.LOJH01076532.1                           1087 18 +      9159 I
e Ellobius_lutescens.LOEQ01003611.1                        244743 18 -    369425 I
e Dolichotis_patagonum.DolPat_scaffold_14102                41345 12 -     73477 I
e Daubentonia_madagascariensis.ctg11                     16849910 12 +  31942871 I
e Dasyprocta_punctata.DasPun_flattened_line_634             62780 12 -    236241 I
e Cuniculus_paca.CunPac_flattened_line_16637                21637 12 +     26546 I
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 36659 6 -     67205 I
e Ctenodactylus_gundi.CteGun_scaffold_447                  215024 12 -    956709 I
e Cricetulus_griseus.LT883672.1                          53036027 19 +  72327488 I
e Cricetomys_gambianus.CriGam_scaffold_949                 283722 15 -    399297 I
e Colobus_polykomos.k141_1406057                            19338 0 +     23629 C
e Colobus_guereza.LG08                                  147667354 0 + 156195979 C
e Colobus_angolensis.KN985967.1                          10889426 0 +  10971483 C
e Chlorocebus_sabaeus.CM001963.2                        101149606 49 + 101219884 I
e Chlorocebus_pygerythrus.k141_1486215                      39047 49 -     53260 I
e Chlorocebus_aethiops.ctg22                             15144583 49 -  15256731 I
e Chiropotes_sagulatus.k141_773804                          19940 12 +     40510 I
e Chiropotes_israelita.k141_1189915                         75759 12 +    196370 I
e Chinchilla_lanigera.JH721867.1                         15965131 12 +  43084221 I
e Cheracebus_torquatus.k141_315545                          50958 12 +     54541 I
e Cheracebus_regulus.k141_2128895                           46278 12 +     57117 I
e Cheracebus_lugens.k141_996499                              1979 12 +    188999 I
e Cheracebus_lucifer.k141_619653                            10238 12 -     18223 I
e Cheirogaleus_medius.k141_854352                             266 12 +     27737 I
e Cheirogaleus_major.k141_1157592                           63964 12 -     68416 I
e Cercopithecus_roloway.k141_2263608                        26398 49 +     37128 I
e Cercopithecus_pogonias.k141_3109732                        7029 49 -     17744 I
e Cercopithecus_petaurista.k141_64532                        6857 49 -     25661 I
e Cercopithecus_nictitans.k141_1129315                       7063 49 +     35577 I
e Cercopithecus_neglectus.k141_2169300                        863 49 -     27215 I
e Cercopithecus_mona.ctg12                               46482752 49 +  46592721 I
e Cercopithecus_albogularis.ctg51                              11995770 49 +  12117833 I
e Cercopithecus_lowei.k141_623764                           29245 49 +     35983 I
e Cercopithecus_hamlyni.k141_129805                          7049 49 +     16677 I
e Cercopithecus_diana.k141_2561715                           4443 49 +     15177 I
e Cercopithecus_cephus.k141_3893260                          4167 49 +     45019 I
e Cercopithecus_ascanius.k141_4123525                        6999 49 -     17608 I
e Cercocebus_torquatus.k141_3969582                         64139 49 -    107033 I
e Cercocebus_lunulatus.k141_4634644                          6829 49 -     21101 I
e Cercocebus_chrysogaster.k141_2328246                      31625 49 +     60454 I
e Cercocebus_atys.KQ010443.1                              6560148 49 +   6739814 I
e Cephalopachus_bancanus.k141_702587                        12545 0 +     21754 C
e Cebus_unicolor.k141_239009                                17176 12 +     25043 I
e Cebus_olivaceus.k141_93739                                12932 12 -     26817 I
e Cebus_albifrons.Contig22                               18896282 12 -  29618158 I
e Cavia_tschudii.CavTsc_scaffold_488                       180559 12 +    436027 I
e Cavia_porcellus.DS562889.1                             15802387 12 -  24440124 I
e Cavia_aperea.AVPZ01000278.1                            15790448 12 -  24422027 I
e Castor_canadensis.CasCan_scaffold_1326                      745 24 -    202837 I
e Carlito_syrichta.NW_007248099.1                          313530 0 +    345090 C
e Capromys_pilorides.CapPil_scaffold_780116                   292 6 +      1571 I
e Cacajao_melanocephalus.k141_1160263                       12188 12 -    134917 I
e Cacajao_hosomi.k141_303789                                19645 12 -    216513 I
e Cacajao_calvus.k141_96166                                 17598 12 +    125063 I
e Cacajao_ayresi.k141_724503                               118578 12 -    171031 I
e Avahi_peyrierasi.k141_798820                               5364 12 +      6337 I
e Avahi_laniger.k141_2840928                                11748 12 -     16375 I
e Ateles_paniscus.k141_1631200                              10678 12 -     25888 I
e Ateles_marginatus.k141_899112                             68709 12 +    119057 I
e Ateles_geoffroyi_a.k141_1300742                             20715 12 -     58268 I
e Ateles_chamek.k141_1072810                                16214 12 +     89302 I
e Ateles_belzebuth.k141_1348307                             65201 12 +     85812 I
e Ateles_geoffroyi_b.tarseq_2582                             9543927 12 +  39197703 I
e Arctocebus_calabarensis.k141_587554                        7214 20 +      9265 I
e Aotus_vociferans.k141_718647                              10642 12 +     23246 I
e Aotus_trivirgatus.k141_1740727                            10613 12 -    104377 I
e Aotus_nancymaae.KZ196176.1                              5754036 12 +   9889416 I
e Aotus_griseimembra.k141_3275623                           10069 12 +     22701 I
e Aotus_azarae.k141_3170768                                 67125 12 +     78111 I
e Alouatta_seniculus.k141_790278                             5517 12 -      9835 I
e Alouatta_puruensis.k141_347198                              269 12 +      9111 I
e Alouatta_palliata.k141_405616                              6240 12 +     16794 I
e Alouatta_nigerrima.k141_494922                              326 12 -      8325 I
e Alouatta_macconnelli.k141_2318944                          3822 12 -     24210 I
e Alouatta_juara.k141_799181                                 1083 12 -      1641 I
e Alouatta_discolor.k141_2023149                             1336 12 +      5070 I
e Alouatta_caraya.k141_664908                                4016 12 -     12443 I
e Alouatta_belzebul.k141_276091                              1793 12 +     19852 I
e Allochrocebus_solatus.k141_371672                          6818 49 -     80423 I
e Allochrocebus_preussi.k141_1108977                         5860 49 +     38766 I
e Allochrocebus_lhoesti.k141_3566948                         6922 49 -     29318 I
e Allenopithecus_nigroviridis.k141_2469532                   6208 49 -     60446 I
e Acomys_cahirinus.AcoCah_scaffold_1625                    118811 15 -    189883 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               18356  6 +    209709 AGG---------CAT
s Acinonyx_jubatus.LLWD01000356.1                         2041131  6 +   3721120 AGG---------TGC
i Acinonyx_jubatus.LLWD01000356.1                       I 16 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    118826  6 -    189883 AAG---------TAC
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 15 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10665070  6 +  23371972 AGG---------TGC
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 16 C 0
s Ailurus_fulgens.LNAC01000003.1                          7102020  6 -  16596857 AGG---------TGC
i Ailurus_fulgens.LNAC01000003.1                        I 17 C 0
s Allactaga_bullata.AllBul_scaffold_141108                   2209  6 -      7259 AAG---------TGT
i Allactaga_bullata.AllBul_scaffold_141108              I 12 I 6
s Alouatta_belzebul.k141_276091                              1805  6 +     19852 GGG---------CAC
i Alouatta_belzebul.k141_276091                         I 12 C 0
s Alouatta_caraya.k141_664908                                4028  6 -     12443 GGG---------CAC
i Alouatta_caraya.k141_664908                           I 12 C 0
s Alouatta_discolor.k141_2023149                             1348  6 +      5070 GGG---------CAC
i Alouatta_discolor.k141_2023149                        I 12 C 0
s Alouatta_juara.k141_799181                                 1095  6 -      1641 GGG---------CAC
i Alouatta_juara.k141_799181                            I 12 C 0
s Alouatta_macconnelli.k141_2318944                          3834  6 -     24210 GGG---------CAC
i Alouatta_macconnelli.k141_2318944                     I 12 C 0
s Alouatta_nigerrima.k141_494922                              338  6 -      8325 GGG---------CAC
i Alouatta_nigerrima.k141_494922                        I 12 C 0
s Alouatta_palliata.k141_405616                              6252  6 +     16794 GGG---------CAC
i Alouatta_palliata.k141_405616                         I 12 C 0
s Alouatta_puruensis.k141_347198                              281  6 +      9111 GGG---------CAC
i Alouatta_puruensis.k141_347198                        I 12 C 0
s Alouatta_seniculus.k141_790278                             5529  6 -      9835 GGG---------CAC
i Alouatta_seniculus.k141_790278                        I 12 C 0
s Ammotragus_lervia.NIVO01013474.1                        3528276  6 +   4113121 AGG---------TAC
i Ammotragus_lervia.NIVO01013474.1                      I 12 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      394363  6 -    631301 AGG---------TGC
i Anoura_caudifer.AnoCau_scaffold_422                   I 12 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             5437  6 +     55446 AGG---------TAC
i Antilocapra_americana.AntAmePen_scaffold_27338        I 12 C 0
s Aotus_azarae.k141_3170768                                 67137  6 +     78111 AGG---------CAC
i Aotus_azarae.k141_3170768                             I 12 C 0
s Aotus_griseimembra.k141_3275623                           10081  6 +     22701 AGG---------CAC
i Aotus_griseimembra.k141_3275623                       I 12 C 0
s Aotus_nancymaae.KZ196176.1                              5754048  6 +   9889416 AGG---------CAC
i Aotus_nancymaae.KZ196176.1                            I 12 C 0
s Aotus_trivirgatus.k141_1740727                            10625  6 -    104377 AGG---------CAC
i Aotus_trivirgatus.k141_1740727                        I 12 C 0
s Aotus_vociferans.k141_718647                              10654  6 +     23246 AGG---------CAC
i Aotus_vociferans.k141_718647                          I 12 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     3308  6 +     11424 AGG---------TGT
i Aplodontia_rufa.AprRuf_scaffold_101456                I 15 C 0
s Arctocebus_calabarensis.k141_587554                        7234  6 +      9265 AGG---------TGC
i Arctocebus_calabarensis.k141_587554                   I 20 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                12656  6 -     29036 AAG---------TAC
i Artibeus_jamaicensis.ArtJam_scaffold_41619            I 12 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9543939  6 +  39197703 AGG---------CAC
i Ateles_geoffroyi_b.tarseq_2582                           I 12 C 0
s Ateles_belzebuth.k141_1348307                             65213  6 +     85812 GGG---------CAC
i Ateles_belzebuth.k141_1348307                         I 12 C 0
s Ateles_chamek.k141_1072810                                16226  6 +     89302 GGG---------CAC
i Ateles_chamek.k141_1072810                            I 12 C 0
s Ateles_geoffroyi_a.k141_1300742                             20727  6 -     58268 AGG---------CAC
i Ateles_geoffroyi_a.k141_1300742                         I 12 C 0
s Ateles_marginatus.k141_899112                             68721  6 +    119057 GGG---------CAC
i Ateles_marginatus.k141_899112                         I 12 C 0
s Ateles_paniscus.k141_1631200                              10690  6 -     25888 GGG---------CAC
i Ateles_paniscus.k141_1631200                          I 12 C 0
s Avahi_laniger.k141_2840928                                11760  6 -     16375 AGG---------TAC
i Avahi_laniger.k141_2840928                            I 12 C 0
s Avahi_peyrierasi.k141_798820                               5376  6 +      6337 AGG---------TAC
i Avahi_peyrierasi.k141_798820                          I 12 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26385664  6 +  51448160 AGG---------TAC
i Balaenoptera_acutorostrata.KI537095.1                 I 12 C 0
s Balaenoptera_bonaerensis.DF502048.1                       10837  6 -     13118 AGG---------TAC
i Balaenoptera_bonaerensis.DF502048.1                   I 12 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   50245  6 -     72089 AGG---------TAC
i Beatragus_hunteri.BeaHun_scaffold_21644               I 12 C 0
s Bison_bison.KN264915.1                                   305195  6 -   6870073 AGG---------TAC
i Bison_bison.KN264915.1                                I 12 C 0
s Bos_indicus.CM003021.1                                 22959301  6 + 161108492 AGG---------TAC
i Bos_indicus.CM003021.1                                I 12 C 0
s Bos_mutus.JH883513.1                                     421480  6 +    998990 AGG---------TAC
i Bos_mutus.JH883513.1                                  I 12 C 0
s Bos_taurus.CM000177.6                                  22667953  6 + 158972876 AGG---------TAC
i Bos_taurus.CM000177.6                                 I 12 C 0
s Bubalus_bubalis.KI419065.1                               676791  6 +   1914593 AGG---------TAC
i Bubalus_bubalis.KI419065.1                            I 12 C 0
s Cacajao_ayresi.k141_724503                               118590  6 -    171031 AGG---------CAC
i Cacajao_ayresi.k141_724503                            I 12 C 0
s Cacajao_calvus.k141_96166                                 17610  6 +    125063 AGG---------CAC
i Cacajao_calvus.k141_96166                             I 12 C 0
s Cacajao_hosomi.k141_303789                                19657  6 -    216513 AGG---------CAC
i Cacajao_hosomi.k141_303789                            I 12 C 0
s Cacajao_melanocephalus.k141_1160263                       12200  6 -    134917 AGG---------CAC
i Cacajao_melanocephalus.k141_1160263                   I 12 C 0
s Camelus_bactrianus.KN276303.1                           3224775  6 -   8989139 AGG---------TGC
i Camelus_bactrianus.KN276303.1                         I 12 C 0
s Camelus_dromedarius.KN271192.1                           402475  6 -  15254737 AGG---------TGC
i Camelus_dromedarius.KN271192.1                        I 12 C 0
s Camelus_ferus.KB016973.1                                2978213  6 +   6889770 AGG---------TGC
i Camelus_ferus.KB016973.1                              I 12 C 0
s CanFam4.chr31                                          11527923  6 +  39901454 AGG---------TGC
i CanFam4.chr31                                         I 16 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   22897  6 +     87036 AGG---------TGC
i Canis_lupus_VD.CanFam_VD_scaffold_16982               I 16 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11274820  6 -  35597290 AGG---------TGC
i Canis_lupus_dingo.QKWQ01001993.1                      I 16 C 0
s Canis_lupus_familiaris.chr31                           11097317  6 +  39895921 AGG---------TGC
i Canis_lupus_familiaris.chr31                          I 16 C 0
s Canis_lupus_orion.HG994411.1                           16464102  6 -  44759192 AGG---------TGC
i Canis_lupus_orion.HG994411.1                          I 16 C 0
s Capra_aegagrus.CM003214.1                              21335709  6 + 157394656 AGG---------TAC
i Capra_aegagrus.CM003214.1                             I 12 C 0
s Capra_hircus.CM004562.1                               135714062  6 - 157403528 AGG---------TAC
i Capra_hircus.CM004562.1                               I 12 C 0
s Capromys_pilorides.CapPil_scaffold_780116                   298  5 +      1571 -GA---------TTC
i Capromys_pilorides.CapPil_scaffold_780116             I 6 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               63650  6 +     67245 AAG---------TAC
i Carollia_perspicillata.CarPer_scaffold_4436           I 12 C 0
s Castor_canadensis.CasCan_scaffold_1326                      769  6 -    202837 AGG---------TGC
i Castor_canadensis.CasCan_scaffold_1326                I 24 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   164520  6 -    276539 AAG---------TGC
i Catagonus_wagneri.CatWag_scaffold_1305                I 12 C 0
s Cavia_aperea.AVPZ01000278.1                            15790460  1 -  24422027 --N------------
i Cavia_aperea.AVPZ01000278.1                           I 12 C 0
s Cavia_porcellus.DS562889.1                             15802399  1 -  24440124 --G------------
i Cavia_porcellus.DS562889.1                            I 12 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       180571  1 +    436027 --G------------
i Cavia_tschudii.CavTsc_scaffold_488                    I 12 C 0
s Cebus_albifrons.Contig22                               18896294  6 -  29618158 ATG---------CAC
i Cebus_albifrons.Contig22                              I 12 C 0
s Cebus_olivaceus.k141_93739                                12944  6 -     26817 AGG---------CAC
i Cebus_olivaceus.k141_93739                            I 12 C 0
s Cebus_unicolor.k141_239009                                17188  6 +     25043 AGG---------CAC
i Cebus_unicolor.k141_239009                            I 12 C 0
s Ceratotherium_simum.JH767818.1                          4369745  6 +   7569818 AGG---------TGC
i Ceratotherium_simum.JH767818.1                        I 12 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           5463  6 -      6963 AGG---------TGC
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      I 12 I 2
s Cheirogaleus_major.k141_1157592                           63976  6 -     68416 AGG---------TAC
i Cheirogaleus_major.k141_1157592                       I 12 C 0
s Cheirogaleus_medius.k141_854352                             278  6 +     27737 AGG---------TAC
i Cheirogaleus_medius.k141_854352                       I 12 C 0
s Cheracebus_lucifer.k141_619653                            10250  6 -     18223 AGG---------AAC
i Cheracebus_lucifer.k141_619653                        I 12 C 0
s Cheracebus_lugens.k141_996499                              1991  6 +    188999 AGG---------AAC
i Cheracebus_lugens.k141_996499                         I 12 C 0
s Cheracebus_regulus.k141_2128895                           46290  6 +     57117 AGG---------AAC
i Cheracebus_regulus.k141_2128895                       I 12 C 0
s Cheracebus_torquatus.k141_315545                          50970  6 +     54541 AGG---------AAC
i Cheracebus_torquatus.k141_315545                      I 12 C 0
s Chinchilla_lanigera.JH721867.1                         15965143  6 +  43084221 AGG---------TCC
i Chinchilla_lanigera.JH721867.1                        I 12 C 0
s Chiropotes_israelita.k141_1189915                         75771  6 +    196370 AGG---------CAC
i Chiropotes_israelita.k141_1189915                     I 12 C 0
s Chiropotes_sagulatus.k141_773804                          19952  6 +     40510 AGG---------CAC
i Chiropotes_sagulatus.k141_773804                      I 12 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                19481  6 -     21363 AGG---------TGC
i Choloepus_didactylus.ChoDid_scaffold_36182            I 12 C 0
s Choloepus_hoffmanni.KN194586.1                           764785  6 +    964067 AGG---------TGC
i Choloepus_hoffmanni.KN194586.1                        I 12 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_954668              1703  6 -      1738 AAA---------TGC
i Chrysochloris_asiatica.ChrAsi_scaffold_954668         I 11 N 0
s Condylura_cristata.JH655880.1                          60623774  6 +  78930452 AGT---------TGC
i Condylura_cristata.JH655880.1                         I 12 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         4167  6 -      5782 AGG---------TAC
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    I 12 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 283737  6 -    399297 AAG---------TAC
i Cricetomys_gambianus.CriGam_scaffold_949              I 15 C 0
s Cricetulus_griseus.LT883672.1                          53036046  6 +  72327488 AAG---------TAC
i Cricetulus_griseus.LT883672.1                         I 19 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              3669  6 -     22648 AGG---------TGA
i Crocidura_indochinensis.CroInd_scaffold_27484         I 12 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            59143  6 -     70449 AGG---------TGC
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 16 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  215036  6 -    956709 agg---------tga
i Ctenodactylus_gundi.CteGun_scaffold_447               I 12 I 846
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 36665  5 -     67205 -GG---------TTC
i Ctenomys_sociabilis.CteSoc_scaffold_19489             I 6 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                21649  6 +     26546 AGG---------TGT
i Cuniculus_paca.CunPac_flattened_line_16637            I 12 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             62792  6 -    236241 ATG---------TGC
i Dasyprocta_punctata.DasPun_flattened_line_634         I 12 C 0
s Dasypus_novemcinctus.JH568778.1                          186507  6 -   6883506 AGG---------TGC
i Dasypus_novemcinctus.JH568778.1                       I 12 I 2
s Daubentonia_madagascariensis.ctg11                     16849922  6 +  31942871 AGA---------TGC
i Daubentonia_madagascariensis.ctg11                    I 12 C 0
s Delphinapterus_leucas.KZ290064.1                       80042261  6 -  96802777 AGG---------TGC
i Delphinapterus_leucas.KZ290064.1                      I 12 C 0
s Desmodus_rotundus.KZ672188.1                           18702866  6 -  18957592 AGG---------TGC
i Desmodus_rotundus.KZ672188.1                          I 12 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 328144  6 +    993696 AGG---------TGC
i Dicerorhinus_sumatrensis.PEKH010003161.1              I 12 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   8778  6 +    151128 AGG---------TGC
i Diceros_bicornis.DicBicMic_scaffold_9545              I 12 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   160616  6 +    228994 AGG---------TTC
i Dinomys_branickii.DinBra_scaffold_1996                I 12 C 0
s Dipodomys_ordii.KN672545.1                              3661069  6 +   4240102 AGG---------TGA
i Dipodomys_ordii.KN672545.1                            I 12 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  3443  6 -     11986 AGG---------TGA
i Dipodomys_stephensi.DipSte_scaffold_84338             I 12 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                41357  6 -     73477 ACA---------TGC
i Dolichotis_patagonum.DolPat_scaffold_14102            I 12 C 0
s Echinops_telfairi.JH980316.1                           23000699  6 -  44670279 AGA---------TGC
i Echinops_telfairi.JH980316.1                          I 11 C 0
s Eidolon_helvum.AWHC01235761.1                              3743  6 -      8619 AGG---------TGC
i Eidolon_helvum.AWHC01235761.1                         I 12 n 12
s Elaphurus_davidianus.JRFZ01086400.1                     1498190  6 +   1727528 AGG---------TAC
i Elaphurus_davidianus.JRFZ01086400.1                   I 12 C 0
s Elephantulus_edwardii.JH947210.1                        7834944  6 +  15467074 AAA---------TGT
i Elephantulus_edwardii.JH947210.1                      I 10 C 0
s Ellobius_lutescens.LOEQ01003611.1                        244761  6 -    369425 AAG---------TAC
i Ellobius_lutescens.LOEQ01003611.1                     I 18 C 0
s Ellobius_talpinus.LOJH01076532.1                           1105  6 +      9159 AAG---------TAC
i Ellobius_talpinus.LOJH01076532.1                      I 18 C 0
s Enhydra_lutris.KZ291749.1                              85879069  6 +  99434291 AGG---------TGC
i Enhydra_lutris.KZ291749.1                             I 16 C 0
s Equus_asinus.JREZ01000062.1                             5858007  6 -   7175178 AGG---------CAC
i Equus_asinus.JREZ01000062.1                           I 12 C 0
s Equus_caballus.CM000402.2                              13356493  6 +  41866177 AGG---------CAC
i Equus_caballus.CM000402.2                             I 12 C 0
s Equus_przewalskii.ATBW01073585.1                          17983  6 +     92910 AGG---------CAC
i Equus_przewalskii.ATBW01073585.1                      I 12 C 0
s Erinaceus_europaeus.JH835290.1                         11543160  6 +  16010500 AGA---------TAC
i Erinaceus_europaeus.JH835290.1                        I 12 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          320508  6 +    330699 AGG---------TAC
i Eschrichtius_robustus.EscRob_flattened_line_685       I 12 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             66964  6 +     89355 AGG---------TAC
i Eubalaena_japonica.EubJap_flattened_line_7756         I 12 C 0
s Eulemur_albifrons.k141_715837                             10044  6 +     13586 AGG---------TAC
i Eulemur_albifrons.k141_715837                         I 12 C 0
s Eulemur_collaris.k141_1015201                              3303  6 -      4292 AGG---------TAC
i Eulemur_collaris.k141_1015201                         I 12 C 0
s Eulemur_coronatus.k141_3240342                            16440  6 +     36558 AGG---------TAC
i Eulemur_coronatus.k141_3240342                        I 12 C 0
s Eulemur_flavifrons.k141_903901                            12762  6 +     60246 AGG---------TAC
i Eulemur_flavifrons.k141_903901                        I 12 C 0
s Eulemur_fulvus.k141_653297                                16247  6 +    109717 AGG---------TAC
i Eulemur_fulvus.k141_653297                            I 12 C 0
s Eulemur_macaco.k141_747087                                 4230  6 -     19505 AGG---------TAC
i Eulemur_macaco.k141_747087                            I 12 C 0
s Eulemur_mongoz.k141_825972                                20905  6 +     27497 AGG---------TAC
i Eulemur_mongoz.k141_825972                            I 12 C 0
s Eulemur_rubriventer.k141_411740                           23361  6 +     26808 AGG---------TAC
i Eulemur_rubriventer.k141_411740                       I 12 C 0
s Eulemur_rufus.k141_1620292                                38093  6 +     46535 AGG---------TAC
i Eulemur_rufus.k141_1620292                            I 12 C 0
s Eulemur_sanfordi.k141_186399                              20834  6 -     29447 AGG---------TAC
i Eulemur_sanfordi.k141_186399                          I 12 C 0
s Felis_catus.CM001386.2                                129900780  6 - 159252932 AGG---------TGC
i Felis_catus.CM001386.2                                I 260 C 0
s Felis_catus_fca126.CM031420.1                         129287757  6 - 158578461 AGG---------TGC
i Felis_catus_fca126.CM031420.1                         I 251 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 28947  6 +     52776 AAG---------TGC
i Felis_nigripes.FelNig_flattened_line_8080             I 338 C 0
s Fukomys_damarensis.KN123630.1                          13896933  6 -  19261668 AGG---------TGC
i Fukomys_damarensis.KN123630.1                         I 12 C 0
s Galago_moholi.ctg555                                     216087  6 -    847004 AGG---------TGC
i Galago_moholi.ctg555                                  I 13 C 0
s Galago_senegalensis.k141_964197                           18448  6 -     43889 AGG---------TGC
i Galago_senegalensis.k141_964197                       I 13 C 0
s Galagoides_demidoff.k141_1769638                          15590  6 +     27357 AGG---------TGC
i Galagoides_demidoff.k141_1769638                      I 12 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               160364  6 +    324696 AGG---------TGC
i Galeopterus_variegatus.GalVar_scaffold_354            I 12 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    187970  6 -    189561 AGG---------TAC
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 12 C 0
s Glis_glis.GliGli_scaffold_79770                           17261  6 -     18683 AGG---------TGC
i Glis_glis.GliGli_scaffold_79770                       I 12 C 0
s Gorilla_beringei.k141_111300                              10053  6 -     14630 AGG---------CAC
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119657153  6 - 195582420 aGG---------CAC
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   80583  6 +    118900 ACA---------TGC
i Graphiurus_murinus.GraMur_scaffold_4493               I 21 C 0
s Hapalemur_alaotrensis.k141_1280836                         6834  6 +     10286 AGG---------TAC
i Hapalemur_alaotrensis.k141_1280836                    I 12 C 0
s Hapalemur_gilberti.k141_279011                             5315  6 -     11661 AGG---------TAC
i Hapalemur_gilberti.k141_279011                        I 12 C 0
s Hapalemur_griseus.k141_1387522                            10639  6 +     56096 AGG---------TAC
i Hapalemur_griseus.k141_1387522                        I 12 C 0
s Hapalemur_meridionalis.k141_186231                        33888  6 -     42470 AGG---------TAC
i Hapalemur_meridionalis.k141_186231                    I 12 C 0
s Hapalemur_occidentalis.k141_797938                        50514  6 -     54384 AGG---------TAC
i Hapalemur_occidentalis.k141_797938                    I 12 C 0
s Helogale_parvula.HelPar_flattened_line_22962              24260  6 +     53719 AGG---------TGC
i Helogale_parvula.HelPar_flattened_line_22962          I 16 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                35100  6 -     91191 AGG---------TAC
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 12 C 0
s Heterocephalus_glaber.JH602058.1                        2561433  6 +  31725842 AGG---------TCC
i Heterocephalus_glaber.JH602058.1                      I 12 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               63667  6 +     73687 AAG---------AGT
i Heterohyrax_brucei.HetBruBak_scaffold_25354           I 12 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              152313  6 +    277961 AGG---------TGC
i Hippopotamus_amphibius.HipAmp_scaffold_1308           I 12 C 0
s Hipposideros_armiger.JXIK01001085.1                      285353  6 -    477199 AGG---------TGC
i Hipposideros_armiger.JXIK01001085.1                   I 16 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959               3039  6 +     26078 AGG---------TGC
i Hipposideros_galeritus.HipGal_scaffold_52959          I 16 C 0
s Hoolock_leuconedys.ctg79                                      9978  6 -   7690867 AGG---------CAC
i Hoolock_leuconedys.ctg79                                 I 14 I 38
s Hyaena_hyaena.HyaHya_flattened_line_20729                 24698  6 -     67322 AGG---------TGC
i Hyaena_hyaena.HyaHya_flattened_line_20729             I 15 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           21998  6 -    119109 ACA---------TGC
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       I 17 C 0
s Hylobates_abbotti.k141_1816750                             2549  6 +      3202 AGG---------CAC
i Hylobates_abbotti.k141_1816750                        I 14 C 0
s Hylobates_agilis.k141_1136966                               558  6 +      9785 AGG---------CAC
i Hylobates_agilis.k141_1136966                         I 14 C 0
s Hylobates_klossii.k141_468230                              4038  6 +      5464 AGG---------CAC
i Hylobates_klossii.k141_468230                         I 14 C 0
s Hylobates_pileatus_b.ContigUN                                 14629384  6 -  25970782 AGG---------CAC
i Hylobates_pileatus_b.ContigUN                                I 14 C 0
s Hylobates_muelleri.k141_1139146                            1936  6 +      4161 AGG---------CAC
i Hylobates_muelleri.k141_1139146                       I 14 C 0
s Hystrix_cristata.HysCri_scaffold_50788                    10325  6 +     22540 AGG---------TGC
i Hystrix_cristata.HysCri_scaffold_50788                I 12 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7131158  6 +  13083262 AGG---------TGC
i Ictidomys_tridecemlineatus.JH393315.1                 I 12 C 0
s Indri_indri.k141_2197838                                   2374  6 +      3484 AGG---------TAC
i Indri_indri.k141_2197838                              I 12 I 6
s Inia_geoffrensis.IniGeo_flattened_line_66725              14485  6 +     17520 AGG---------AGC
i Inia_geoffrensis.IniGeo_flattened_line_66725          I 12 C 0
s Jaculus_jaculus.JH725517.1                              8579956  6 +  11848649 AAG---------TGT
i Jaculus_jaculus.JH725517.1                            I 12 I 6
s Kogia_breviceps.KogBre_flattened_line_35920               29104  6 +     37189 AGG---------TGC
i Kogia_breviceps.KogBre_flattened_line_35920           I 12 C 0
s Lagothrix_lagothricha.k141_12968                          54811  6 -    147782 GGG---------CAC
i Lagothrix_lagothricha.k141_12968                      I 12 C 0
s Lemur_catta.scaffold_1                                258412192  6 - 285822530 AGG---------TAC
i Lemur_catta.scaffold_1                                I 12 C 0
s Lepilemur_ankaranensis.k141_884009                        29516  6 +     39228 AGG---------TAC
i Lepilemur_ankaranensis.k141_884009                    I 12 C 0
s Lepilemur_dorsalis.k141_134267                            58880  6 +     63517 AGG---------TAC
i Lepilemur_dorsalis.k141_134267                        I 12 C 0
s Lepilemur_ruficaudatus.k141_574529                        37262  6 -     38897 AGG---------TAC
i Lepilemur_ruficaudatus.k141_574529                    I 12 C 0
s Lepilemur_septentrionalis.k141_710646                      3306  6 -     13103 AGG---------TAC
i Lepilemur_septentrionalis.k141_710646                 I 12 C 0
s Leptonychotes_weddellii.KB714749.1                      3093014  6 -   3498232 AGG---------TGC
i Leptonychotes_weddellii.KB714749.1                    I 16 C 0
s Lepus_americanus.LepAme_scaffold_62849                    21796  6 +     22452 AGG---------TGC
i Lepus_americanus.LepAme_scaffold_62849                I 12 C 0
s Lipotes_vexillifer.KE558548.1                            141426  6 +   3060487 AGG---------TGC
i Lipotes_vexillifer.KE558548.1                         I 12 C 0
s Loris_lydekkerianus.k141_550999                           16050  6 +     84689 AGG---------TGC
i Loris_lydekkerianus.k141_550999                       I 20 C 0
s Loris_tardigradus.ctg97                                 3783785  6 +   6799190 AGG---------TGC
i Loris_tardigradus.ctg97                               I 20 C 0
s Loxodonta_africana.GL010040.1                          20599584  6 -  62548349 AGG---------TGT
i Loxodonta_africana.GL010040.1                         I 12 C 0
s Lycaon_pictus.CM007556.1                               11096773  6 +  39895028 AGG---------TGC
i Lycaon_pictus.CM007556.1                              I 16 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4376               200671  6 +    248908 CGG---------TGC
i Macroglossus_sobrinus.MacSob_scaffold_4376            I 13 C 0
s Manis_javanica.JSZB01003966.1                            153772  6 +    252755 AGA---------TGC
i Manis_javanica.JSZB01003966.1                         I 12 C 0
s Manis_pentadactyla.KN017078.1                             41369  6 +     58827 AGA---------TGC
i Manis_pentadactyla.KN017078.1                         I 12 C 0
s Marmota_marmota.CZRN01000005.1                         36879025  6 +  64221397 AGG---------TGC
i Marmota_marmota.CZRN01000005.1                        I 12 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       67284  6 -    234502 CAA---------TGC
i Megaderma_lyra.MegLyr_scaffold_3562                   I 12 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             8166  6 -     87323 AGG---------TGC
i Mellivora_capensis.MelCap_flattened_line_15433        I 16 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 3005  6 +    115071 AAG---------TAC
i Meriones_unguiculatus.MerUng_scaffold_9483            I 15 C 0
s Mesocricetus_auratus.KB708139.1                         1052601  6 -  26018355 AAG---------TAC
i Mesocricetus_auratus.KB708139.1                       I 19 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    4079  6 -     12939 AGG---------TGC
i Mesoplodon_bidens.MesBid_scaffold_96348               I 12 C 0
s Microcebus_murinus.CM007691.1                          16515240  6 +  47401472 AGG---------TAC
i Microcebus_murinus.CM007691.1                         I 12 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  42266  6 -     48017 AGA---------TGC
i Microgale_talazaci.MicTal_scaffold_34660              I 11 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               26604  6 -     32043 AGG---------TGC
i Micronycteris_hirsuta.MicHir_scaffold_37978           I 12 C 0
s Microtus_ochrogaster.CM001673.1                        22825586  6 -  98408828 AAG---------TAC
i Microtus_ochrogaster.CM001673.1                       I 18 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8214955  6 +  10048721 AGG---------TGC
i Miniopterus_natalensis.LDJU01000022.1                 I 12 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            39413  6 +     45743 AGG---------TGC
i Miniopterus_schreibersii.MinSch_scaffold_24116        I 12 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        18510  6 -    104932 AGG---------TGC
i Mirounga_angustirostris.MirAng_flattened_line_8852    I 16 C 0
s Mirza_zaza.k141_593947                                     5925  6 -     12809 AGG---------TAC
i Mirza_zaza.k141_593947                                I 12 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 151854  6 +    154973 AGG---------TGC
i Monodon_monoceros.MonMon_M_scaffold_5598              I 12 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                165120  6 +    265003 AGG---------TGC
i Mormoops_blainvillei.MorMeg_scaffold_2952             I 12 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  8649  6 -     19904 AGG---------TAC
i Moschus_moschiferus.MosMos_scaffold_78805             I 12 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  152000  6 -    168139 AGG---------TGC
i Mungos_mungo.MunMun_flattened_line_8729               I 16 C 0
s Murina_feae.MurFea_scaffold_2254                          25946  6 -    100666 AGG---------TGC
i Murina_feae.MurFea_scaffold_2254                      I 12 I 1
s Mus_caroli.LT608236.1                                  70772844  6 +  92629107 GAT---------TTC
i Mus_caroli.LT608236.1                                 I 18 C 0
s Mus_musculus.chr16                                     75494896  6 +  98207768 GAT---------TTC
i Mus_musculus.chr16                                    I 18 C 0
s Mus_pahari.LT608305.1                                  67561648  6 +  89017189 AAT---------TTC
i Mus_pahari.LT608305.1                                 I 18 C 0
s Mus_spretus.CM004110.1                                 74337619  6 +  97876770 GAT---------TTA
i Mus_spretus.CM004110.1                                I 18 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             15670  6 +     98495 AGG---------TGC
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 12 C 0
s Mustela_putorius.JH417978.1                             4430267  6 -  28371801 AGG---------TGC
i Mustela_putorius.JH417978.1                           I 16 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     96401  5 -    117718 -AA---------TTC
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 6 C 0
s Myotis_brandtii.KE161952.1                               972960  6 +   8389877 AGG---------TGC
i Myotis_brandtii.KE161952.1                            I 12 I 1
s Myotis_davidii.KB114863.1                               5024038  6 +   6462685 AGG---------TGC
i Myotis_davidii.KB114863.1                             I 12 I 1
s Myotis_lucifugus.GL429887.1                             3470467  6 -   3747815 AGG---------TGC
i Myotis_lucifugus.GL429887.1                           I 12 I 1
s Myotis_myotis.MyoMyo_scaffold_6123                        15696  6 +     66751 AGG---------TGC
i Myotis_myotis.MyoMyo_scaffold_6123                    I 12 I 1
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             8450  6 -      8794 AGG---------TGC
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        I 12 C 0
s Nannospalax_galili.KL201303.1                            125323  6 +    362372 TTG---------TGC
i Nannospalax_galili.KL201303.1                         I 16 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4491901  6 -  14209539 AGG---------TGC
i Neomonachus_schauinslandi.NINY01007774.1              I 16 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3956445  6 -   4490290 AGG---------TGC
i Neophocaena_asiaeorientalis.KZ688543.1                I 12 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  52434  6 +     94413 AGG---------TGC
i Noctilio_leporinus.NocLep_scaffold_12062              I 12 C 0
s Nomascus_annamensis.k141_762468                            1055  6 -      2755 AGG---------CAC
i Nomascus_annamensis.k141_762468                       I 14 C 0
s Nomascus_concolor.k141_256540                              7665  6 -      8966 AGG---------AAC
i Nomascus_concolor.k141_256540                         I 14 C 0
s Nomascus_gabriellae.k141_1400361                           1606  6 -      2203 AGG---------CAC
i Nomascus_gabriellae.k141_1400361                      I 14 C 0
s Nomascus_siki_b.tarseq_453                             6918  6 +     12787 AGG---------CAC
i Nomascus_siki_b.tarseq_453                        I 14 C 0
s Nomascus_siki_a.k141_421408                                  1520  6 +     16235 AGG---------CAC
i Nomascus_siki_a.k141_421408                             I 14 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                39643  6 +   3668941 AGG---------TGC
i Nyctereutes_procyonoides.CAJHUB010000786.1            I 16 C 0
s Nycticebus_bengalensis.LG16                            65572820  6 -  95554990 AGG---------TGC
i Nycticebus_bengalensis.LG16                           I 19 C 0
s Nycticebus_coucang.k141_6040852                             457  6 +      1868 AGG---------TGC
i Nycticebus_coucang.k141_6040852                       I 19 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65681005  6 +  89412551 AGG---------TGC
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     I 19 C 0
s Ochotona_princeps.JH802095.1                            5000869  6 -  23139505 TGG---------CAT
i Ochotona_princeps.JH802095.1                          I 12 C 0
s Octodon_degus.JH651621.1                                3691740  5 +  10294119 -ga---------ttC
i Octodon_degus.JH651621.1                              I 5 C 0
s Odobenus_rosmarus.KB229369.1                             686600  6 -   3126709 AGG---------TGC
i Odobenus_rosmarus.KB229369.1                          I 16 C 0
s Odocoileus_virginianus.KZ101650.1                       1085624  6 +   1425656 AGG---------TAC
i Odocoileus_virginianus.KZ101650.1                     I 12 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         43690  6 +     78940 AGG---------TAC
i Okapia_johnstoni.LVCL01S0017931.1                     I 12 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  131394  6 +    145789 AAG---------TAC
i Ondatra_zibethicus.OndZib_scaffold_6821               I 19 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  44315  6 +     62360 AAG---------TAC
i Onychomys_torridus.OnyTor_scaffold_12578              I 15 C 0
s Orcinus_orca.KB316965.1                                 7230126  6 -   7562323 AGG---------TGC
i Orcinus_orca.KB316965.1                               I 12 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              64980  6 -     66828 AGG---------TTC
i Orycteropus_afer.OryAfe_flattened_line_13509          I 12 C 0
s Oryctolagus_cuniculus.CM000803.1                      141884812  6 + 163896628 AGG---------TGC
i Oryctolagus_cuniculus.CM000803.1                      I 12 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      316780  6 -    505867 AGG---------TGC
i Otocyon_megalotis.JAEUCK010005121.1                   I 16 C 0
s Otolemur_crassicaudatus.k141_505435                        5948  6 -     53940 AGG---------TGC
i Otolemur_crassicaudatus.k141_505435                   I 12 C 0
s Otolemur_garnettii.GL873528.1                          18013914  6 -  38779656 AGG---------TGC
i Otolemur_garnettii.GL873528.1                         I 9 C 0
s Ovis_aries.CM001582.2                                 134084882  6 - 275406953 AGG---------TAC
i Ovis_aries.CM001582.2                                 I 12 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      86123  6 +    140051 AGG---------TAC
i Ovis_canadensis.OviCan_scaffold_6251                  I 12 C 0
s Pan_paniscus.CM003386.1                               127579332  6 - 205426864 aGG---------CAC
i Pan_paniscus.CM003386.1                               C 0 I 38
s Pan_troglodytes.CM009241.2                            120156492  6 - 196562556 aGG---------CAC
i Pan_troglodytes.CM009241.2                            C 0 I 38
s Panthera_onca.PanOnc_flattened_line_1615                  41546  6 +    295523 AGG---------TGC
i Panthera_onca.PanOnc_flattened_line_1615              I 16 C 0
s Panthera_pardus.KV860323.1                              3645362  6 +  18214204 AGG---------TGC
i Panthera_pardus.KV860323.1                            I 16 C 0
s Panthera_tigris.KE721879.1                              5034999  6 -   6340057 AGG---------TGC
i Panthera_tigris.KE721879.1                            I 16 C 0
s Pantholops_hodgsonii.KE114631.1                         1073755  6 -   1292953 AGG---------TAC
i Pantholops_hodgsonii.KE114631.1                       I 12 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    123022  6 -    135482 AGG---------TGT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 I 16 C 0
s Perodicticus_ibeanus.k141_117958                          11612  6 -     23713 AGG---------TGC
i Perodicticus_ibeanus.k141_117958                      I 20 C 0
s Perodicticus_potto.k141_1136815                           12763  6 +     61070 AGG---------TGC
i Perodicticus_potto.k141_1136815                       I 20 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       3071  6 +     49596 AGG---------TGA
i Perognathus_longimembris.PerPac_flattened_line_19359  I 12 C 0
s Peromyscus_maniculatus.KI615458.1                       2840182  6 -   3366660 AAG---------TAC
i Peromyscus_maniculatus.KI615458.1                     I 15 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    17774  6 -     36578 AGT---------TGC
i Petromus_typicus.PetTyp_scaffold_33007                I 12 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              4586  6 +      8220 AGG---------TGC
i Phocoena_phocoena.PhoPho_flattened_line_53071         I 12 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990          11068  6 +     21690 AGG---------TGC
i Platanista_gangetica.PlaMin_flattened_line_72990      I 12 C 0
s Plecturocebus_bernhardi.k141_959214                       26902  6 +     44506 AGG---------AAC
i Plecturocebus_bernhardi.k141_959214                   I 12 C 0
s Plecturocebus_brunneus.k141_498086                        27115  6 +     67491 AGG---------AAC
i Plecturocebus_brunneus.k141_498086                    I 12 C 0
s Plecturocebus_caligatus.k141_2539816                      17354  6 -     98129 AGG---------AAC
i Plecturocebus_caligatus.k141_2539816                  I 12 C 0
s Plecturocebus_cinerascens.k141_744510                     26955  6 +    147771 AGG---------AAC
i Plecturocebus_cinerascens.k141_744510                 I 12 C 0
s Plecturocebus_cupreus.k141_1145860                         3590  6 -     43940 AGG---------AAC
i Plecturocebus_cupreus.k141_1145860                    I 12 C 0
s Plecturocebus_dubius.k141_3565563                          7673  6 -     55515 AGG---------AAC
i Plecturocebus_dubius.k141_3565563                     I 12 C 0
s Plecturocebus_grovesi.k141_242819                         27027  6 +    152463 AGG---------AAC
i Plecturocebus_grovesi.k141_242819                     I 12 C 0
s Plecturocebus_hoffmannsi.k141_985533                       4835  6 -    119457 AGG---------AAC
i Plecturocebus_hoffmannsi.k141_985533                  I 12 C 0
s Plecturocebus_miltoni.k141_841561                         16749  6 +    134592 AGG---------AAC
i Plecturocebus_miltoni.k141_841561                     I 12 C 0
s Plecturocebus_moloch.k141_890597                          27337  6 -     75465 AGG---------AAC
i Plecturocebus_moloch.k141_890597                      I 12 C 0
s Pongo_abelii.NDHI03003816.1                              191963  6 -    373494 aGG---------CAC
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19812610  6 +  19899266 AGG---------CAC
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                4771  6 -      9567 AAG---------AGT
i Procavia_capensis.ProCapCap_scaffold_149274           I 12 C 0
s Prolemur_simus.MPIZ01000048.1                           6853564  6 +  12164890 aGG---------TAC
i Prolemur_simus.MPIZ01000048.1                         I 13 C 0
s Propithecus_coquerelli.NW_012147863.1                     22372  6 -     30946 NNN---------NNN
i Propithecus_coquerelli.NW_012147863.1                 I 12 C 0
s Propithecus_coronatus.k141_1353159                         8668  6 +     11805 AGG---------TAC
i Propithecus_coronatus.k141_1353159                    I 12 C 0
s Propithecus_diadema.k141_577245                           48002  6 +     52369 AGG---------TAC
i Propithecus_diadema.k141_577245                       I 12 C 0
s Propithecus_edwardsi.k141_1317105                         40389  6 -     44753 AGG---------TAC
i Propithecus_edwardsi.k141_1317105                     I 12 C 0
s Propithecus_perrieri.k141_7554                            22312  6 +     27322 AGG---------TAC
i Propithecus_perrieri.k141_7554                        I 12 C 0
s Propithecus_tattersalli.k141_907138                       21957  6 -     53241 AGG---------TAC
i Propithecus_tattersalli.k141_907138                   I 12 C 0
s Propithecus_verreauxi.k141_158021                         44220  6 -     48185 AGG---------TAC
i Propithecus_verreauxi.k141_158021                     I 12 C 0
s Psammomys_obesus.NESX01026517.1                           39981  6 +     77221 AAG---------TAC
i Psammomys_obesus.NESX01026517.1                       I 15 C 0
s Pteronotus_parnellii.KE867983.1                            7772  6 -     27784 AGG---------TGC
i Pteronotus_parnellii.KE867983.1                       I 12 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        251913  6 -    344369 AGG---------TGC
i Pteronura_brasiliensis.PteBra_flattened_line_1343     I 16 C 0
s Pteropus_alecto.KB030474.1                              8976966  6 -  19980961 AGG---------TGC
i Pteropus_alecto.KB030474.1                            I 12 n 12
s Pteropus_vampyrus.KN525782.1                            3456029  6 -   6428604 AGG---------TGC
i Pteropus_vampyrus.KN525782.1                          I 33 n 18
s Puma_concolor.QAVW01000427.1                          131541486  6 - 161321710 AGG---------TGC
i Puma_concolor.QAVW01000427.1                          I 16 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                22469  6 +     68503 AGG---------TAC
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 12 C 0
s Rattus_norvegicus.chr11                                13918587  6 +  90463843 AAT---------TGC
i Rattus_norvegicus.chr11                               I 18 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1794395 15 +   2252614 AGGATTATCAGTTGC
i Rhinolophus_sinicus.LVEH01000179.1                    I 12 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_21814                3038  6 -     44886 AGG---------TGC
i Rousettus_aegyptiacus.RouAeg_scaffold_21814           I 12 n 12
s Saiga_tatarica.SaiTat_scaffold_371890                      3152  6 -      4338 AGG---------TAC
i Saiga_tatarica.SaiTat_scaffold_371890                 I 12 C 0
s Saimiri_boliviensis.NW_024100938.1                     15677356  6 -  43202129 AGG---------CAC
i Saimiri_boliviensis.NW_024100938.1                    I 12 C 0
s Saimiri_cassiquiarensis.k141_808270                        9269  6 +     34089 AGG---------CAC
i Saimiri_cassiquiarensis.k141_808270                   I 12 C 0
s Saimiri_macrodon.k141_2087127                              9209  6 -     60842 AGG---------CAC
i Saimiri_macrodon.k141_2087127                         I 12 C 0
s Saimiri_oerstedii.k141_841116                              9303  6 +     67014 AGG---------CAC
i Saimiri_oerstedii.k141_841116                         I 12 C 0
s Saimiri_sciureus.k141_1947592                              9280  6 +     60816 AGG---------CAC
i Saimiri_sciureus.k141_1947592                         I 12 C 0
s Saimiri_ustus.k141_1282476                                 9217  6 -     76454 AGG---------CAC
i Saimiri_ustus.k141_1282476                            I 12 C 0
s Sapajus_apella.ctg10                                   17345982  6 -  30362882 AGG---------CAC
i Sapajus_apella.ctg10                                  I 12 C 0
s Sapajus_macrocephalus.k141_966464                         25303  6 -     62485 AGG---------CAC
i Sapajus_macrocephalus.k141_966464                     I 12 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  106486  6 -    120886 GAG---------TAC
i Sigmodon_hispidus.SigHis_scaffold_11332               I 35 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            25857  6 +    739146 AGG---------TAC
i Solenodon_paradoxus.SolPar_flattened_line_1012        I 12 C 0
s Sorex_araneus.JH798170.1                               17776185  6 -  27805282 tGG---------GTC
i Sorex_araneus.JH798170.1                              I 14 C 0
s Spermophilus_dauricus.KZ294190.1                        2244859  6 +   2842873 AGG---------TGC
i Spermophilus_dauricus.KZ294190.1                      I 12 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             240690  6 -    276980 AGG---------TGC
i Spilogale_gracilis.SpiGra_flattened_line_905          I 16 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            34890  6 +     62062 AGG---------TGC
i Suricata_suricatta.SurSur_flattened_line_20339        I 16 C 0
s Sus_scrofa.CM000824.4                                 189276890  6 + 218635234 AGG---------TGC
i Sus_scrofa.CM000824.4                                 I 12 C 0
s Symphalangus_syndactylus.tarseq_24                        19643  6 -  13920577 AGG---------CAC
i Symphalangus_syndactylus.tarseq_24                    I 14 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                4031  6 +     20549 AGG---------TGC
i Tadarida_brasiliensis.TadBra_scaffold_61492           I 12 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               18124  6 +     45698 AGG---------TGC
i Tamandua_tetradactyla.TamTet_scaffold_26877           I 12 C 0
s Tapirus_indicus.TapInd_scaffold_176                      812478  6 +   1148477 AGG---------TGC
i Tapirus_indicus.TapInd_scaffold_176                   I 12 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  63120  6 +     99546 AGG---------TGC
i Tapirus_terrestris.TapTer_scaffold_14939              I 9 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                  1312  6 -      3104 AGG---------TGC
i Tolypeutes_matacus.TolMat_scaffold_475685             I 12 I 2
s Tonatia_saurophila.TonSau_scaffold_3334                  139779  6 -    259118 AGG---------TGC
i Tonatia_saurophila.TonSau_scaffold_3334               I 12 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                  10637  6 +     90398 AGA---------TAC
i Tragulus_javanicus.TraJav_scaffold_14717              I 13 C 0
s Trichechus_manatus.JH594618.1                          16090656  5 +  31416278 AGG---------T-C
i Trichechus_manatus.JH594618.1                         I 12 C 0
s Tupaia_chinensis.KB320831.1                             2801911  3 -   3938065 ------------TGC
i Tupaia_chinensis.KB320831.1                           I 3322 C 0
s Tupaia_tana.TupTan_flattened_line_68454                   10739  3 +     13056 ------------TGC
i Tupaia_tana.TupTan_flattened_line_68454               I 7 C 0
s Tursiops_truncatus.MRVK01000923.1                      69318856  6 -  96451834 AGG---------TGC
i Tursiops_truncatus.MRVK01000923.1                     I 12 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                    1593  6 +    136657 AGG---------TGC
i Uropsilus_gracilis.UroGra_scaffold_4115               I 11 C 0
s Ursus_maritimus.KK498671.1                              6522338  6 +  28682327 AGG---------TGC
i Ursus_maritimus.KK498671.1                            I 16 C 0
s Varecia_rubra.k141_432109                                 10233  6 -     20643 AGG---------TAC
i Varecia_rubra.k141_432109                             I 12 C 0
s Varecia_variegata.k141_775891                             29768  6 -     33872 AGG---------TAC
i Varecia_variegata.k141_775891                         I 12 C 0
s Vicugna_pacos.KN269600.1                                1529883  6 -   2331223 AGG---------TGC
i Vicugna_pacos.KN269600.1                              I 12 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                146007  6 -    281493 AGG---------TGC
i Vulpes_lagopus.VulLag_flattened_line_2045             I 16 C 0
s Xerus_inauris.XerIna_scaffold_7898                       132355  6 -    134049 AGG---------TGC
i Xerus_inauris.XerIna_scaffold_7898                    I 12 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        221461  6 -    227762 AGG---------TGC
i Zalophus_californianus.ZalCal_flattened_line_4097     I 16 C 0
s Zapus_hudsonius.ZapHud_scaffold_202118                     2027  6 -      3360 AAG---------TCT
i Zapus_hudsonius.ZapHud_scaffold_202118                I 11 I 6
s Ziphius_cavirostris.ZipCav_flattened_line_60625            3441  6 -     13665 AGG---------TGC
i Ziphius_cavirostris.ZipCav_flattened_line_60625       I 12 C 0
e Eptesicus_fuscus.JH977687.1                             4710621 19 +   6522550 I
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Scalopus_aquaticus.ScaAqu_scaffold_9300                   41195  6 -    114521 I
e Pipistrellus_pipistrellus.PipPip_scaffold_3306           101200  4 +    112873 I
e Lasiurus_borealis.LasBor_scaffold_59542                    7182  8 +     26176 I
e Hylobates_pileatus_a.tarseq_592                             37267 2881 -     60944 I
e Trachypithecus_pileatus.k141_1022309                       5229  0 +     13828 C
e Trachypithecus_phayrei.ctg3                            44662917  0 -  44834318 C
e Trachypithecus_obscurus.k141_1115109                       8133  0 -     28054 C
e Trachypithecus_melamera.k141_699241                        2989  0 -     24393 C
e Trachypithecus_leucocephalus.k141_381681                   3008  0 +     12481 C
e Trachypithecus_laotum.k141_760702                          4722  0 +     14371 C
e Trachypithecus_hatinhensis.k141_504423                     6070  0 -     15592 C
e Trachypithecus_germaini.k141_868450                        3886  0 -     11566 C
e Trachypithecus_geei.k141_670367                           46085  0 -     54611 C
e Trachypithecus_francoisi.k141_768164                       4692  0 -     14244 C
e Trachypithecus_cristatus.k141_1011511                      5264  0 -     12939 C
e Trachypithecus_crepusculus.k141_1588528                   23363  0 -     32910 C
e Trachypithecus_auratus.k141_738098                        29803  0 +     38948 C
e Theropithecus_gelada.CM009951.1                       194012731 49 - 194193292 I
e Tarsius_wallacei.k141_48636                               64696  0 +     65473 C
e Tarsius_lariang.k141_609102                               31387  0 +     42269 C
e Semnopithecus_vetulus.k141_1143185                        16482  0 +     30600 C
e Semnopithecus_schistaceus.k141_387461                     33460  0 +     42640 C
e Semnopithecus_priam.k141_410937                           40315  0 +     46263 C
e Semnopithecus_johnii.k141_785014                         121535  0 +    130994 C
e Semnopithecus_hypoleucos.k141_761524                      11531  0 +     20762 C
e Semnopithecus_entellus.k141_1572367                        6156  0 +     15331 C
e Rhinopithecus_strykeri.ctg4                            44859310  0 -  45163003 C
e Rhinopithecus_roxellana.NC_044549.1                   206380407  0 - 206558726 C
e Rhinopithecus_bieti.k119_554384                            2920  0 -     17045 C
e Pygathrix_nigripes_a.k141_101123                             8540  0 +     18040 C
e Pygathrix_nigripes_b.ctg79                                 6809151  0 +   6970761 C
e Pygathrix_cinerea.k141_374971                             32654  0 +     56732 C
e Presbytis_mitrata.k141_860013                              8664  0 +     14865 C
e Presbytis_comata.k141_672698                               8549  0 -     15069 C
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Piliocolobus_tephrosceles.PDMG02000036.1               26743274  0 +  26888534 C
e Piliocolobus_kirkii.k141_929665                            4791  0 +      7694 C
e Piliocolobus_gordonorum.k141_1270531                       5424  0 -     17985 C
e Piliocolobus_badius.k141_1987485                           4805  0 -      5908 C
e Papio_ursinus.k141_1345919                                 6958 49 -      7628 I
e Papio_papio.k141_979496                                   11093 49 +     14967 I
e Papio_kindae.k141_5458022                                 72561 49 -    104429 I
e Papio_hamadryas.Contig15                               47518570 49 +  47705337 I
e Papio_cynocephalus.k141_45376                              4288 49 +     25005 I
e Papio_anubis.CM001492.2                               188161198 49 - 188283584 I
e Nasalis_larvatus.k141_153429                              11267  0 +     48152 C
e Miopithecus_ogouensis.k141_2935907                         6955 49 +     29742 I
e Mandrillus_sphinx.Contig144                             4455212 49 -   4543643 I
e Mandrillus_leucophaeus.scaffold125                     43442409 49 -  43563597 I
e Macaca_tonkeana.k141_2870633                               9373 49 -     27140 I
e Macaca_thibetana.k99_662710                               22003 49 -     24607 I
e Macaca_silenus.Contig12                                43845834 356 +  43892939 I
e Macaca_siberu.k141_741907                                 20719 49 -     55006 I
e Macaca_radiata.k141_3680256                                7037 49 -     13212 I
e Macaca_nigra.k141_282495                                   9376 49 -     46448 I
e Macaca_nemestrina.KQ004885.1                           11450690 49 +  11645122 I
e Macaca_mulatta.NC_041755.1                            196040520 49 + 196197964 I
e Macaca_maura.k141_251854                                  50422 49 -     79256 I
e Macaca_fuscata.k119_938422                                 4003 49 -     26361 I
e Macaca_fascicularis.k141_155037                           51893 49 +     63263 I
e Macaca_cyclopis.k119_883699                                4022 49 -     26467 I
e Macaca_assamensis.Contig65                             12711449 49 +  12821369 I
e Macaca_arctoides.k141_2201161                             24986 49 +     74745 I
e Lophocebus_aterrimus.ctg55                             19253237 49 +  19376315 I
e Erythrocebus_patas.Contig8                             48781616 49 -  48907691 I
e Colobus_polykomos.k141_1406057                            19338  0 +     23629 C
e Colobus_guereza.LG08                                  147667354  0 + 156195979 C
e Colobus_angolensis.KN985967.1                          10889426  0 +  10971483 C
e Chlorocebus_sabaeus.CM001963.2                        101149606 49 + 101219884 I
e Chlorocebus_pygerythrus.k141_1486215                      39047 49 -     53260 I
e Chlorocebus_aethiops.ctg22                             15144583 49 -  15256731 I
e Cercopithecus_roloway.k141_2263608                        26398 49 +     37128 I
e Cercopithecus_pogonias.k141_3109732                        7029 49 -     17744 I
e Cercopithecus_petaurista.k141_64532                        6857 49 -     25661 I
e Cercopithecus_nictitans.k141_1129315                       7063 49 +     35577 I
e Cercopithecus_neglectus.k141_2169300                        863 49 -     27215 I
e Cercopithecus_mona.ctg12                               46482752 49 +  46592721 I
e Cercopithecus_albogularis.ctg51                              11995770 49 +  12117833 I
e Cercopithecus_lowei.k141_623764                           29245 49 +     35983 I
e Cercopithecus_hamlyni.k141_129805                          7049 49 +     16677 I
e Cercopithecus_diana.k141_2561715                           4443 49 +     15177 I
e Cercopithecus_cephus.k141_3893260                          4167 49 +     45019 I
e Cercopithecus_ascanius.k141_4123525                        6999 49 -     17608 I
e Cercocebus_torquatus.k141_3969582                         64139 49 -    107033 I
e Cercocebus_lunulatus.k141_4634644                          6829 49 -     21101 I
e Cercocebus_chrysogaster.k141_2328246                      31625 49 +     60454 I
e Cercocebus_atys.KQ010443.1                              6560148 49 +   6739814 I
e Cephalopachus_bancanus.k141_702587                        12545  0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530  0 +    345090 C
e Allochrocebus_solatus.k141_371672                          6818 49 -     80423 I
e Allochrocebus_preussi.k141_1108977                         5860 49 +     38766 I
e Allochrocebus_lhoesti.k141_3566948                         6922 49 -     29318 I
e Allenopithecus_nigroviridis.k141_2469532                   6208 49 -     60446 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               18362 38 +    209709 CC---TAT--T--TT-TACCGGC-A---ATAACA-T-TTT-TTA--GAACTT--A-C---------------G
s Acinonyx_jubatus.LLWD01000356.1                         2041137 38 +   3721120 TG---TCC--T--TT-TACTGGC-A---ATAACA-T-CAG-A-A--GAACTCA-A-G---------------G
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    118832 41 -    189883 T-C-T-TT--TTTTT-TTCTGATTT---TTAACA-T-TTG-G-G--GAACTTA-T-G---------------G
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10665076 39 +  23371972 TC---TCC-TT--TT-TACTGGC-A---GTAACA-T-CTG-A-A--GAACTTA-A-G---------------G
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7102026 38 -  16596857 GC---TCC--T--TT-TACTGGC-A---GTAACA-T-CTG-A-A--GAACTTA-A-C---------------G
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_141108                   2221 28 -      7259 ------------------CTGGC-A---TTAACA-T-TTG-A-A--GAACGTA-T-G---------------A
i Allactaga_bullata.AllBul_scaffold_141108              I 6 C 0
s Allenopithecus_nigroviridis.k141_2469532                   6257 30 -     60446 ----------------TATCGGC-A---ATAACA-T-TTT-TTA--GAACTT--A-C---------------G
i Allenopithecus_nigroviridis.k141_2469532              I 49 C 0
s Allochrocebus_lhoesti.k141_3566948                         6971 30 -     29318 ----------------TATCGGC-A---ATAACA-T-TTT-TTA--GAACTT--A-C---------------G
i Allochrocebus_lhoesti.k141_3566948                    I 49 C 0
s Allochrocebus_preussi.k141_1108977                         5909 30 +     38766 ----------------TATCGGC-A---ATAACA-T-TTT-TTA--GAACTT--A-C---------------G
i Allochrocebus_preussi.k141_1108977                    I 49 C 0
s Allochrocebus_solatus.k141_371672                          6867 30 -     80423 ----------------TATCGGC-A---ATAACA-T-TTT-TTA--GAACTT--A-C---------------G
i Allochrocebus_solatus.k141_371672                     I 49 C 0
s Alouatta_belzebul.k141_276091                              1811 39 +     19852 TC---TGT--T--TT-TATCAGC-A---ATAACA-T-TTT-TTA--GAACTT-CA-G---------------G
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                4034 39 -     12443 TC---TGT--T--TT-TATCAGC-A---ATAACA-T-TTT-TTA--GAACTT-CA-G---------------G
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                             1354 39 +      5070 TC---TGT--T--TT-TATCAGC-A---ATAACA-T-TTT-TTA--GAACTT-CA-G---------------G
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                 1101 39 -      1641 TC---TGT--T--TT-TATCAGC-A---ATAACA-T-TTT-TTA--GAACTT-CA-G---------------G
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          3840 39 -     24210 TC---TGT--T--TT-TATCAGC-A---ATAACA-T-TTT-TTA--GAACTT-CA-G---------------G
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_494922                              344 39 -      8325 TC---TGT--T--TT-TATCAGC-A---ATAACA-T-TTT-TTA--GAACTT-CA-G---------------G
i Alouatta_nigerrima.k141_494922                        C 0 C 0
s Alouatta_palliata.k141_405616                              6258 39 +     16794 TC---TGT--T--TT-TATCAGC-A---ATAACA-T-TTT-TTA--GAACTT-CA-G---------------G
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_347198                              287 39 +      9111 TC---TGT--T--TT-TATCAGC-A---ATAACA-T-TTT-TTA--GAACTT-CA-G---------------G
i Alouatta_puruensis.k141_347198                        C 0 C 0
s Alouatta_seniculus.k141_790278                             5535 39 -      9835 TC---TGT--T--TT-TATCAGC-A---ATAACA-T-TTT-TTA--GAACTT-CA-G---------------G
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3528282 38 +   4113121 TC---TCC--T--TT-TACTGGC-A---ATAACA-A-CTG-A-A--GAACTTA-A-G---------------G
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      394369 38 -    631301 TC---TCC--T--TT-TACTGGC-A---ATGACA-T-TTG-A-A--GAACTTA-A-A---------------G
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             5443 38 +     55446 TC---TTC--T--TT-TACTGGC-A---ATAACA-A-CTG-A-A--GAACTTA-A-G---------------G
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 67143 40 +     78111 TC---TCT--T--TT-TATCAGC-A---ATAACATT-TTT-TTA--GAACTT-CA-G---------------G
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                           10087 40 +     22701 TC---TCT--T--TT-TATCAGC-A---ATAACATT-TTT-TTA--GAACTT-CA-G---------------G
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5754054 40 +   9889416 TC---TCT--T--TT-TATCAGC-A---ATAACATT-TTT-TTA--GAACTT-CA-G---------------G
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                            10631 40 -    104377 TC---TCT--T--TT-TATCAGC-A---ATAACATT-TTT-TTA--GAACTT-CA-G---------------G
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                              10660 40 +     23246 TC---TCT--T--TT-TATCAGC-A---ATAACATT-TTT-TTA--GAACTT-CA-G---------------G
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     3314 38 +     11424 T-C-T-GT--T--TT-TACTGGC-A---GTAACA-T-TTG-A-A--GAACTTA-A-G---------------G
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        7240 39 +      9265 TT---GCT--T--TT-TACTGGC-A---ATAACG-T-TTG-A-A--GAACTTAAA-G---------------G
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                12662 38 -     29036 TC---TCC--T--TT-TACTGGC-A---ATAACA-T-TAG-A-A--GAACTTA-A-G---------------G
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9543945 39 +  39197703 TC---TCT--T--TT-TATCAGC-A---GTAACA-T-TTT-TTA--GAACTT-CA-G---------------G
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             65219 39 +     85812 TC---TCT--T--TT-TATCAGC-A---GTAACA-T-TTT-TTA--GAACTT-CA-G---------------G
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                16232 39 +     89302 TC---TCT--T--TT-TATCAGC-A---GTAACA-T-TTT-TTA--GAACTT-CA-G---------------G
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             20733 39 -     58268 TC---TCT--T--TT-TATCAGC-A---GTAACA-T-TTT-TTA--GAACTT-CA-G---------------G
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             68727 39 +    119057 TC---TCT--T--TT-TATCAGC-A---GTAACA-T-TTT-TTA--GAACTT-CA-G---------------G
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              10696 39 -     25888 TC---TCT--T--TT-TATCAGC-A---GTAACA-T-TTT-TTA--GAACTT-CA-G---------------G
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                11766 38 -     16375 TC---TCT--T--TT-TACTGGC-A---ACAACA-T-TTG-A-A--GAACTTA-A-G---------------G
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               5382 38 +      6337 TC---TCT--T--TT-TACTGGC-A---ACAACA-T-TTG-A-A--GAACTTA-A-G---------------G
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26385670 39 +  51448160 TCC--TCC--T--TT-TACTGGC-A---ATAACA-A-CTG-A-A--GAACTTA-A-G---------------G
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                       10843 39 -     13118 TCC--TCC--T--TT-TACTGGC-A---ATAACA-A-CTG-A-A--GAACTTA-A-G---------------G
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   50251 40 -     72089 TCTC-TCC--T--TT-TACTGGC-A---ATAACA-A-CTG-A-A--GAACTTA-A-G---------------G
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   305201 38 -   6870073 TC---TCC--T--TT-TACTGGC-A---GTAACA-A-TTG-A-A--GAACTTA-A-A---------------G
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22959307 38 + 161108492 TC---TCC--T--TT-TACTGGC-A---GTAACA-A-TTG-A-A--GAACTTA-A-A---------------G
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     421486 38 +    998990 TC---TCC--T--TT-TACTGGC-A---GTAACA-A-TTG-A-A--GAACTTA-A-A---------------G
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22667959 38 + 158972876 TC---TCC--T--TT-TACTGGC-A---GTAACA-A-TTG-A-A--GAACTTA-A-A---------------G
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               676797 38 +   1914593 TC---TCC--T--TT-TACTGGC-A---GTAACA-A-TTG-A-A--GAACTTA-A-G---------------G
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               118596 34 -    171031 TC---TCT--T--TT-TATCAGC-A---ATAACA-T-TTT-TTA--GAACT----------------------
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 17616 34 +    125063 TC---TCT--T--TT-TATCAGC-A---ATAACA-T-TTT-TTA--GAACT----------------------
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                19663 34 -    216513 TC---TCT--T--TT-TATCAGC-A---ATAACA-T-TTT-TTA--GAACT----------------------
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       12206 34 -    134917 TC---TCT--T--TT-TATCAGC-A---ATAACA-T-TTT-TTA--GAACT----------------------
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3224781 38 -   8989139 TC---TCC--T--TT-TACTGGC-A---GTAACA-A-CCA-A-A--GAACTTA-A-G---------------G
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           402481 38 -  15254737 TC---TCC--T--TT-TACTGGC-A---GTAACA-A-CCA-A-A--GAACTTA-A-G---------------G
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2978219 38 +   6889770 TC---TCC--T--TT-TACTGGC-A---GTAACA-A-CCA-A-A--GAACTTA-A-G---------------G
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11527929 38 +  39901454 TC---TCC--T--TT-TACTGGC-A---GTAACA-T-CTG-A-A--GAACTTA-A-G---------------G
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   22903 38 +     87036 TC---TCC--T--TT-TACTGGC-A---GTAACA-T-CTG-A-A--GAACTTA-A-G---------------G
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11274826 38 -  35597290 TC---TCC--T--TT-TACTGGC-A---GTAACA-T-CTG-A-A--GAACTTA-A-G---------------G
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11097323 38 +  39895921 TC---TCC--T--TT-TACTGGC-A---GTAACA-T-CTG-A-A--GAACTTA-A-G---------------G
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16464108 38 -  44759192 TC---TCC--T--TT-TACTGGC-A---GTAACA-T-CTG-A-A--GAACTTA-A-G---------------G
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21335715 38 + 157394656 TC---TCC--T--TT-TACTGGC-A---ATAACA-A-CTG-A-A--GAACTTA-A-G---------------G
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135714068 38 - 157403528 TC---TCC--T--TT-TACTGGC-A---ATAACA-A-CTG-A-A--GAACTTA-A-G---------------G
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_780116                   303 37 +      1571 T-----CT--T--TTGTCCTGGC-A---ATAATA-T-TTG-A-A--GAACTTA-A-G---------------G
i Capromys_pilorides.CapPil_scaffold_780116             C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               63656 38 +     67245 TC---TCC--T--TT-TACTGGC-A---ATAACA-T-CTG-A-A--GAACTTA-A-G---------------G
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_1326                      775 39 -    202837 T-C-T-AT--T--TTTGACTGGC-A---ATAACA-T-TTC-A-A--GAACTTA-A-G---------------G
i Castor_canadensis.CasCan_scaffold_1326                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   164526 38 -    276539 TC---TTC--T--TT-TACTGGC-A---ATAACA-C-CTG-A-A--GAACTT-TG-G---------------A
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15790461 37 -  24422027 N-----NN--N--NNNNNNNNNN-N---NNNNNN-N-NNN-N-N--NNNNNN-NN-N---------------N
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15802400 37 -  24440124 T-----GT--T--TTGTCCTGGA-A---ATAACA-T-TTA-A-A--GTATGTA-A-T---------------G
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       180572 37 +    436027 T-----GT--T--TTGTCCTGGA-A---ATAACA-T-TTA-A-A--GTATGTA-A-T---------------G
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18896300 39 -  29618158 TC---TCT--T--TT-TATGAGC-A---ATAACA-T-TTT-TTA--GAAATT-CA-G---------------G
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                12950 39 -     26817 TC---TCT--T--TT-TATGAGC-A---ATAACA-T-TTT-TTA--GAAATT-CA-G---------------G
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                17194 39 +     25043 TC---TCT--T--TT-TATGAGC-A---ATAACA-T-TTT-TTA--GAAATT-CA-G---------------G
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4369751 38 +   7569818 TC---TCC--T--TT-TACTGGC-A---ATAACA-T-CTG-A-A--GAACTT-GA-G---------------G
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Cercocebus_atys.KQ010443.1                              6560197 30 +   6739814 ----------------TATCGGC-A---ATAACA-C-TTT-TTA--GAACTT--A-C---------------G
i Cercocebus_atys.KQ010443.1                            I 49 C 0
s Cercocebus_chrysogaster.k141_2328246                      31674 30 +     60454 ----------------TATCGGC-A---ATAACA-C-TTT-TCA--GAACTT--A-C---------------G
i Cercocebus_chrysogaster.k141_2328246                  I 49 C 0
s Cercocebus_lunulatus.k141_4634644                          6878 30 -     21101 ----------------TATCGGC-A---ATAACA-C-TTT-TTA--GAACTT--A-C---------------G
i Cercocebus_lunulatus.k141_4634644                     I 49 C 0
s Cercocebus_torquatus.k141_3969582                         64188 30 -    107033 ----------------TATCGGC-A---ATAACA-C-TTT-TTA--GAACTT--A-C---------------G
i Cercocebus_torquatus.k141_3969582                     I 49 C 0
s Cercopithecus_ascanius.k141_4123525                        7048 30 -     17608 ----------------TATCGGC-A---ATAACA-T-TTT-TTA--GAACTT--A-C---------------G
i Cercopithecus_ascanius.k141_4123525                   I 49 C 0
s Cercopithecus_cephus.k141_3893260                          4216 30 +     45019 ----------------TATCGGC-A---ATAACA-T-TTT-TTA--GAACTT--A-C---------------G
i Cercopithecus_cephus.k141_3893260                     I 49 C 0
s Cercopithecus_diana.k141_2561715                           4492 30 +     15177 ----------------TATCGGC-A---ATAACA-T-TTT-TTA--GAACTT--A-C---------------G
i Cercopithecus_diana.k141_2561715                      I 49 C 0
s Cercopithecus_hamlyni.k141_129805                          7098 30 +     16677 ----------------TATCGGC-A---ATAACA-T-TTT-TTA--GAACTT--A-C---------------G
i Cercopithecus_hamlyni.k141_129805                     I 49 C 0
s Cercopithecus_lowei.k141_623764                           29294 30 +     35983 ----------------TATCGGC-A---ATAACA-T-TTT-TTA--GAACTT--A-C---------------G
i Cercopithecus_lowei.k141_623764                       I 49 C 0
s Cercopithecus_albogularis.ctg51                              11995819 30 +  12117833 ----------------TATCGGC-A---ATAACA-T-TTT-TTA--GAACTT--A-C---------------G
i Cercopithecus_albogularis.ctg51                             I 49 C 0
s Cercopithecus_mona.ctg12                               46482801 30 +  46592721 ----------------TATCGGC-A---ATAACA-T-TTT-TTA--GAACTT--A-C---------------G
i Cercopithecus_mona.ctg12                              I 49 C 0
s Cercopithecus_neglectus.k141_2169300                        912 30 -     27215 ----------------TATCGGC-A---ATAACA-T-TTT-TTA--GAACTT--A-C---------------G
i Cercopithecus_neglectus.k141_2169300                  I 49 C 0
s Cercopithecus_nictitans.k141_1129315                       7112 30 +     35577 ----------------TATCGGC-A---ATAACA-T-TTT-TTA--GAACTT--A-C---------------G
i Cercopithecus_nictitans.k141_1129315                  I 49 C 0
s Cercopithecus_petaurista.k141_64532                        6906 30 -     25661 ----------------TATCGGC-A---ATAACA-T-TTT-TTA--GAACTT--A-T---------------G
i Cercopithecus_petaurista.k141_64532                   I 49 C 0
s Cercopithecus_pogonias.k141_3109732                        7078 30 -     17744 ----------------TATCGGC-A---ATAACA-T-TTT-TTA--GAACTT--A-C---------------G
i Cercopithecus_pogonias.k141_3109732                   I 49 C 0
s Cercopithecus_roloway.k141_2263608                        26447 30 +     37128 ----------------TATCGGC-A---ATAACA-T-TTT-TTA--GAACTT--A-C---------------G
i Cercopithecus_roloway.k141_2263608                    I 49 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           5471 32 -      6963 ----------T--AT-TACTGGC-A---ACAACA-T-TTG-A-A--GAACTTA-A-G----------------
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      I 2 C 0
s Cheirogaleus_major.k141_1157592                           63982 38 -     68416 TC---TCT--T--GT-TACTGGC-A---ATAACA-T-TTG-A-A--GAACTTA-A-G---------------G
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_854352                             284 38 +     27737 TC---TCT--T--GT-TACTGGC-A---ATAACA-T-TTG-A-A--GAACTTA-A-G---------------G
i Cheirogaleus_medius.k141_854352                       C 0 C 0
s Cheracebus_lucifer.k141_619653                            10256 39 -     18223 TC---TCT--T--TT-TAACTTC-A---ATAACA-T-TTT-TTA--GAACTT-CA-G---------------G
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              1997 39 +    188999 TC---TCT--T--TT-TAACTTC-A---ATAACA-T-TTT-TTA--GAACTT-CA-G---------------G
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           46296 39 +     57117 TC---TCT--T--TT-TAACTTC-A---ATAACA-T-TTT-TTA--GAACTT-CA-G---------------G
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          50976 39 +     54541 TC---TCT--T--TT-TAACTTC-A---ATAACA-T-TTT-TTA--GAACTT-CA-G---------------G
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15965149 38 +  43084221 T-----CT--T--TTGTCCTGGC-A---GTAACAGT-TTG-A-A--GAACTTA-A-G---------------G
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         75777 39 +    196370 TC---TCT--T--TT-TATCAGC-A---ATAACA-T-TTT-TTG--GAACTT-CA-G---------------G
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          19958 39 +     40510 TC---TCT--T--TT-TATCAGC-A---ATAACA-T-TTT-TTG--GAACTT-CA-G---------------G
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15144632 30 -  15256731 ----------------TATCGGC-A---ATAACA-T-TTT-TTA--GAACTT--A-C---------------G
i Chlorocebus_aethiops.ctg22                            I 49 C 0
s Chlorocebus_pygerythrus.k141_1486215                      39096 30 -     53260 ----------------TATCGGC-A---ATAACA-T-TTT-TTA--GAACTT--A-C---------------G
i Chlorocebus_pygerythrus.k141_1486215                  I 49 C 0
s Chlorocebus_sabaeus.CM001963.2                        101149655 30 + 101219884 ----------------TATCGGC-A---ATAACA-T-TTT-TTA--GAACTT--A-C---------------G
i Chlorocebus_sabaeus.CM001963.2                        I 49 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                19487 38 -     21363 TC---TCC--T--TT-TACTGGC-A---ATAACA-T-TTG-A-A--GAACTTA-A-G---------------G
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           764791 38 +    964067 TC---TCC--T--TT-TACTGGC-A---ATAACA-T-TTG-A-A--GAACTTA-A-G---------------G
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_304221                76 34 -      7053 TT---C----C--TT-TAGTGAC-A---GTAA-A-G-TTG-A-A--GAA-TTA-A-C---------------A
i Chrysochloris_asiatica.ChrAsi_scaffold_304221         N 0 C 0
s Colobus_angolensis.KN985967.1                          10889426 31 +  10971483 ----------------TATCAGC-A---ATAACA-T-TTT-TTA--GAACTTA-A-C---------------G
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147667354 31 + 156195979 ----------------TATCAGC-A---ATAACA-T-TTT-TTA--GAACTTA-A-C---------------G
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            19338 27 +     23629 ----------------TATCGGC-A---ATACCA-T-TTT-TTA--GAACTT---------------------
i Colobus_polykomos.k141_1406057                        C 0 I 3
s Condylura_cristata.JH655880.1                          60623780 38 +  78930452 TC---ACA--T--TT-TACTGGC-A---ATAACA-T-TTG-A-A--GAACTTA-A-G---------------G
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         4173 22 -      5782 TC---TCC--T--TT-TACTGGC-A---ACAACC---------------------------------------
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 I 5
s Cricetomys_gambianus.CriGam_scaffold_949                 283743 39 -    399297 T-C-T-CT--T--TT-TACTGGT-A---TTAACA-T-TTG-A-A--GAACTTACT-G---------------G
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53036052 51 +  72327488 T-C----T--C--AT-TACTGGT-G---TTCACA-T-TTG-A-A--AAACATA-T-GACAAGTGAAACATATG
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              3675 38 -     22648 TC---TCC--T--TT-TACTGGC-A---ATAATA-T-CTG-A-A--GGACTTA-G-G---------------G
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            59149 38 -     70449 TG---TCC--T--TT-TACTGGC-A---ATAGCA-T-CTG-A-A--GAACTTA-A-G---------------G
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  215888 37 -    956709 T-----GT--T--TT-TCCTGGC-A---ATTACA-T-TTGTA-A--AAACCTA-A-G---------------A
i Ctenodactylus_gundi.CteGun_scaffold_447               I 846 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 36670 37 -     67205 T-----TT--T--TCATCCTGGC-A---ATAATA-T-TTG-A-A--GAACTTA-A-G---------------G
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                21655 37 +     26546 T-----CT--T--TTGTCCTGGA-A---ATGACA-T-TTG-A-A--GAACTTA-A-G---------------G
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             62798 37 -    236241 T-----CT--T--TTGTCCTGGC-A---ATAACA-T-TTG-A-A--GAATTTA-A-G---------------C
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          186515 32 -   6883506 ----------T--AT-TACTGGC-A---ATAACA-T-TTG-A-A--AAACTTA-A-G----------------
i Dasypus_novemcinctus.JH568778.1                       I 2 C 0
s Daubentonia_madagascariensis.ctg11                     16849928 38 +  31942871 TC---TCT--T--TT-TACTGGC-A---ATAACA-T-TTG-A-A--GAACTTA-A-G---------------G
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80042267 38 -  96802777 TC---TCC--T--TT-TACTGGC-A---ATAACA-A-CTG-A-A--GAACTTA-A-G---------------G
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18702872 38 -  18957592 TC---TCC--T--TT-TACTGGC-A---ATAACA-T-TTG-A-A--GAACGTA-A-G---------------G
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 328150 38 +    993696 TC---TCC--T--TT-TACTGGC-A---ATAACA-T-CTG-A-A--GAACTTA-A-G---------------G
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   8784 38 +    151128 TC---TCC--T--TT-TACTGGC-A---ATAACA-T-CTG-A-A--GAACTT-GA-G---------------G
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   160622 37 +    228994 T-----CT--T--TTATCTTGGC-A---ATAACG-T-TTG-A-A--GAACTTA-A-G---------------G
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3661075 38 +   4240102 T-C-T-CT--T--TA-TACTGAC-A---GTAACT-A-TTG-G-G--GAAGTTA-T-G---------------G
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  3449 38 -     11986 T-C-T-CT--T--TA-TACTGAC-A---GTAACT-A-TTG-G-G--GAAGTTA-T-G---------------G
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                41363 37 -     73477 T-----CT--T--TTATCCTGGA-A---ATAACA-T-TTA-A-A--GAACTT-TA-G---------------G
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           23000705 37 -  44670279 TC---ACC--A--TG-TAATGGC-A---AGAA-A-C-TTG-A-A--GAAGTTA-T-G---------------A
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 14872 38 +     24177 TC---TCC--T--TT-TACTGGC-A---ATAACA-T-TTG-A-A--GAAACTA-A-G---------------G
i Eidolon_helvum.KE772537.1                             I 193 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1498196 38 +   1727528 TC---TCC--T--TT-TACTGGC-A---ATAGCA-A-CTG-A-A--GAACTTA-A-G---------------G
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7834950 37 +  15467074 TC---CAC--T--TT-TAGtaac-a---ataa-a-t-ttg-a-a--aaattc-aC-A---------------A
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        244767 38 -    369425 T-C-A-CT--T--AT-TACTGGT-G---TTCACA-T-TTG-A-A--TAACGTA-G-G---------------A
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01076532.1                           1111 38 +      9159 T-C-A-CT--T--AT-TACTGGT-G---TTCACA-T-TTG-A-A--TAACATA-G-G---------------A
i Ellobius_talpinus.LOJH01076532.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85879075 38 +  99434291 TT---TCC--T--TT-TACTGGC-A---GTAACA-T-CTG-A-A--GAACTT-TA-C---------------G
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4710640 37 +   6522550 -C---TGC--T--TT-TACTGGC-A---ATAACA-T-TTA-A-A--GAGCTTA-A-G---------------G
i Eptesicus_fuscus.JH977687.1                           I 19 C 0
s Equus_asinus.JREZ01000062.1                             5858013 38 -   7175178 TC---TCC--T--TT-TACTGGC-A---ATAGCA-T-CTG-A-A--GAACTTA-A-G---------------G
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13356499 38 +  41866177 TC---TCC--T--TT-TACTGGC-A---ATAGCA-T-CTG-A-A--GAACTTA-A-G---------------G
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          17989 38 +     92910 TC---TCC--T--TT-TACTGGC-A---ATAGCA-T-CTG-A-A--GAACTTA-A-G---------------G
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11543166 38 +  16010500 TT---GCC--T--TT-TACTGGC-A---GTAACA-T-TTG-A-A--GAACTT-GA-G---------------G
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48781665 30 -  48907691 ----------------TATCGGC-A---ATAACA-T-TTT-TTA--GAACTT--A-C---------------G
i Erythrocebus_patas.Contig8                            I 49 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          320514 38 +    330699 TC---TCC--T--TT-TACTGGC-A---ATAACA-A-CTG-A-A--GAACTTA-A-G---------------G
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             66970 38 +     89355 TC---TCC--T--TT-TACTGGC-A---ATAACA-A-CTG-A-A--GAACTTA-A-G---------------G
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                             10050 38 +     13586 TC---TCT--T--GT-TACTGGC-A---ATAACA-T-TTG-A-A--GAACTTA-A-G---------------G
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_1015201                              3309 38 -      4292 TC---TCT--T--GT-TACTGGC-A---ATAACA-T-TTG-A-A--GAACTTA-A-G---------------G
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            16446 38 +     36558 TC---TCT--T--GT-TACTGGC-A---ATAACA-T-TTG-A-A--GAACTTA-A-G---------------G
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            12768 38 +     60246 TC---TCT--T--GT-TACTGGC-A---ATAACA-T-TTG-A-A--GAACTTA-A-G---------------G
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                16253 38 +    109717 TC---TCT--T--GT-TACTGGC-A---ATAACA-T-TTG-A-A--GAACTTA-A-G---------------G
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 4236 38 -     19505 TC---TCT--T--GT-TACTGGC-A---ATAACA-T-TTG-A-A--GAACTTA-A-G---------------G
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                20911 38 +     27497 TC---TCT--A--GT-TACTGGC-A---ATAACA-T-TTG-A-A--GAACTTA-A-G---------------G
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           23367 38 +     26808 TC---TCT--T--GT-TACTGAC-A---ATAACA-T-TTG-A-A--GAACTTA-A-G---------------G
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                38099 38 +     46535 TC---TCT--T--GT-TACTGGC-A---ATAACA-T-TTG-A-A--GAACTTA-A-G---------------G
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              20840 38 -     29447 TC---TCT--T--GT-TACTGGC-A---ATAACA-T-TTG-A-A--GAACTTA-A-G---------------G
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129900786 38 - 159252932 TG---TCC--T--TT-TACTGGC-A---ATAACA-T-CTG-A-A--GAACTCA-A-G---------------G
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129287763 38 - 158578461 TG---TCC--T--TT-TATTGGC-A---ATAACA-T-CTG-A-A--GAACTCA-A-G---------------G
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 28953 38 +     52776 TG---TCC--T--TT-TACTGGC-A---ATAACA-T-CTG-A-A--GAACTCA-A-G---------------G
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13896939 35 -  19261668 T-----CT--T--TTTT-CTGGC-A---AGAATA-T--TG-A-A--GAAATTA-A-G---------------G
i Fukomys_damarensis.KN123630.1                         C 0 I 155
s Galago_moholi.ctg555                                     216093 38 -    847004 TT---TCT--T--TT-TACTGGC-A---ATAACA-T-TTG-A-A--GAACTTA-A-G---------------G
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           18454 38 -     43889 TT---TCT--T--TT-TACTGGC-A---ATAACA-T-TTG-A-A--GAACTTA-A-G---------------G
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          15596 38 +     27357 TT---TCT--T--TT-TACTGGC-A---ATAACA-T-TTG-A-A--GAACTTA-A-G---------------G
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               160370 38 +    324696 TC---TCT--T--TT-TACTGGT-A---ATAAGA-G-TTG-A-A--GAACTTA-A-G---------------G
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    187976 38 -    189561 TC---TCC--T--TT-TACTGGC-A---ATAACA-A-CTG-A-A--GAACTTA-A-G---------------G
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           17267 38 -     18683 T-----CTGTT--TT-TACTGGC-A---ATAACA-T-TTG-A-A--GAACTTA-A-G---------------G
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                              10059 38 -     14630 TC---TAT--T--TT-TACCAGC-A---ATAACA-T-TTT-TTA--GAACTT--A-T---------------G
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119657159 38 - 195582420 TC---TAT--T--TT-TACCAGC-A---ATAACA-T-TTT-TTA--GAACTT--A-T---------------G
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   80589 36 +    118900 T-----CT--T--TT-TACTGGC-A---ATAACA-T-TTG-A-A--GAAGAGA-A-A---------------G
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         6840 38 +     10286 TC---TCT--T--GT-TACTGGC-A---ATAACA-T-TTG-A-A--GAACTTA-A-G---------------G
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             5321 38 -     11661 TC---TCT--T--GT-TACTGGC-A---ATAACA-T-TTG-A-A--GAACTTA-A-G---------------G
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                            10645 38 +     56096 TC---TCT--T--GT-TACTGGC-A---ATAACA-T-TTG-A-A--GAACTTA-A-G---------------G
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        33894 38 -     42470 TC---TCT--T--GT-TGCTGGC-A---ATAACA-T-TTG-A-A--GAACTTA-A-G---------------G
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        50520 38 -     54384 TC---TCT--T--GT-TACTGGC-A---ATAACA-T-TTG-A-A--GAACTTA-A-G---------------G
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              24266 38 +     53719 CG---TCC--T--TT-TACTGGC-A---TTAACA-T-CTG-A-A--GAACTTA-A-G---------------G
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                35106 38 -     91191 TC---TCC--T--TT-TACTGGC-A---ATAACA-A-CTG-A-A--GAACTTA-A-G---------------G
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2561439 36 +  31725842 T-----CT--T--CTTTCCTGGC-A---ATAATA-T--TG-A-A--GAACTAA-A-G---------------G
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               63673 20 +     73687 TC---CCC--T--TT-TAGTGAC-C---ATAA-----------------------------------------
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 I 15
s Hippopotamus_amphibius.HipAmp_scaffold_1308              152319 38 +    277961 TC---TCC--T--TT-TACTGGC-A---ATAACA-A-CTG-A-A--GAACTTA-A-G---------------G
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      285359 38 -    477199 TC---TTC--T--TT-TACTGGC-A---ATAACA-C-TTG-A-A--GAACTTA-A-G---------------G
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959               3045 38 +     26078 TC---TTC--T--TT-TACTAGC-A---ATAACA-T-TTG-A-A--GAATTTA-A-G---------------G
i Hipposideros_galeritus.HipGal_scaffold_52959          C 0 C 0
s Hoolock_leuconedys.ctg649                                   109727 38 +    115816 TC---TAT--T--TT-TATTGGC-A---ATAACA-T-TTT-TTA--GAGCTT--A-C---------------G
i Hoolock_leuconedys.ctg649                                I 126 n 38
s Hyaena_hyaena.HyaHya_flattened_line_20729                 24704 38 -     67322 TG---TCC--T--TT-TACTGGC-A---ATAATA-T-CTG-A-A--GAACTTA-A-G---------------G
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           22004 37 -    119109 T-----CT--T--TTGTCCTGGA-A---ATAACA-T-TTA-A-A--GAACTTA-A-C---------------C
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_1816750                             2555 38 +      3202 TC---TAT--T--TT-TATTGGC-A---ATAACA-T-TTT-TTA--GAGCTT--A-C---------------G
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1136966                               564 38 +      9785 TC---TAT--T--TT-TATTGGC-A---ATAACA-T-TTT-TTA--GAGCTT--A-C---------------G
i Hylobates_agilis.k141_1136966                         C 0 C 0
s Hylobates_klossii.k141_468230                              4044 38 +      5464 TC---TAT--T--TT-TATTGGC-A---ATAACA-T-TTT-TTA--GAGCTT--A-C---------------G
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14629390 38 -  25970782 TC---TAT--T--TT-TATTGGC-A---ATAACA-T-TTT-TTA--GAACTT--A-T---------------G
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            1942 38 +      4161 TG---TAT--T--TT-TATTGGC-A---ATAACA-T-TTT-TTA--GAGCTT--A-C---------------G
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                    10331 37 +     22540 T-----CT--T--TTTTCCTGGC-A---ATGACA-T-TTG-A-A--GGATTGA-A-A---------------G
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7131164 38 +  13083262 T-C-T-CT--T--TT-TACTGGC-A---ATAATA-T-TCG-A-A--GAACTTA-A-G---------------G
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   2386 30 +      3484 ----------------TACTGGC-A---ATAACA-T-TTG-A-A--GAACTTA-A-G---------------G
i Indri_indri.k141_2197838                              I 6 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              14491 38 +     17520 TC---TTC--T--TT-TACTGGC-A---ATAACA-A-CTG-A-A--GATCTTA-A-G---------------G
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8579968 28 +  11848649 ------------------TTGGC-A---TTAACA-T-TTG-A-A--GGACAT-GT-G---------------G
i Jaculus_jaculus.JH725517.1                            I 6 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               29110 38 +     37189 TC---TCC--T--CT-TACTGGC-A---ATAACA-A-CTG-A-A--GAACTTA-A-G---------------G
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          54817 39 -    147782 TC---TCT--T--TT-TATCAGC-A---ATAACA-T-TTT-TTA--GAACTT-CA-G---------------G
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    7190 37 +     26176 -C---TCC--T--TT-TACTAGC-A---AGAACA-T-TTA-A-A--GAGCTTA-A-G---------------G
i Lasiurus_borealis.LasBor_scaffold_59542               I 8 C 0
s Lemur_catta.scaffold_1                                258412198 38 - 285822530 TC---TCT--T--GT-TACTGGC-A---ATAACA-T-TTG-A-A--GAACTTA-A-G---------------G
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        29522 38 +     39228 TC---TCT--T--GT-TACTGGC-A---ATAACA-T-TTG-A-A--GAACTTA-A-G---------------G
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            58886 38 +     63517 TC---TCT--T--GT-TACTGGC-A---ATAACA-T-TTG-A-A--GAACTTA-A-G---------------G
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        37268 38 -     38897 TC---TCT--T--GT-TACTGGC-A---ATAACA-T-TTG-A-A--GAACTTA-A-G---------------G
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      3312 38 -     13103 TC---TCT--T--GT-TACTGGC-A---ATAACA-T-TTG-A-A--GAACTTA-A-G---------------G
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3093020 38 -   3498232 TC---TCT--T--TT-TACTGGC-A---GTAACA-T-CTG-A-A--AAACTTA-A-G---------------G
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    21802 38 +     22452 TC---TCC--T--TT-TCCTGGA-A---GTAACA-T-TTG-A-A--GAACTTA-A-G---------------A
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            141432 38 +   3060487 TC---TCC--T--TT-TACTGGC-A---ATAACA-A-CTG-A-A--GAACTTA-A-G---------------G
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19253286 30 +  19376315 ----------------TATCGGC-A---ATAACA-C-TTT-TTA--GAACTT--A-C---------------G
i Lophocebus_aterrimus.ctg55                            I 49 C 0
s Loris_lydekkerianus.k141_550999                           16056 38 +     84689 TT---TCT--T--TT-TACTGGC-A---ATAACA-T-TTG-A-A--GAACTTA-A-G---------------G
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3783791 38 +   6799190 TT---TCT--T--TT-TACTGGC-A---ATAACA-T-TTG-A-A--GAACTTA-A-G---------------G
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20599590 37 -  62548349 TC---CCC--T--TT-TAGTGAC-A---ATAA-A-T-CTG-A-A--GAACTTA-A-G---------------G
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11096779 38 +  39895028 TC---TCC--T--TT-TACTGGC-A---GTAACA-T-CTG-A-A--GAACTTA-A-G---------------G
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             25035 30 +     74745 ----------------TATCGGC-A---ATAACA-T-TTT-TTA--GAACTT--A-C---------------G
i Macaca_arctoides.k141_2201161                         I 49 C 0
s Macaca_assamensis.Contig65                             12711498 30 +  12821369 ----------------TATCGCC-A---ATAACA-T-TTT-TTA--GAACTT--A-C---------------G
i Macaca_assamensis.Contig65                            I 49 C 0
s Macaca_cyclopis.k119_883699                                4071 30 -     26467 ----------------TATCGGC-A---ATAACA-T-TTT-TTA--GAACTT--A-C---------------G
i Macaca_cyclopis.k119_883699                           I 49 C 0
s Macaca_fascicularis.k141_155037                           51942 30 +     63263 ----------------TATCGGC-A---ATAACA-T-TTT-TTA--GAACTT--A-C---------------G
i Macaca_fascicularis.k141_155037                       I 49 C 0
s Macaca_fuscata.k119_938422                                 4052 30 -     26361 ----------------TATCGGC-A---ATAACA-T-TTT-TTA--GAACTT--A-C---------------G
i Macaca_fuscata.k119_938422                            I 49 C 0
s Macaca_leonina.k141_2667654                                 355 30 -      5626 ----------------TATCGGC-A---ATAACA-T-TTT-TTA--GAACTT--A-C---------------G
i Macaca_leonina.k141_2667654                           N 0 C 0
s Macaca_maura.k141_251854                                  50471 30 -     79256 ----------------TATCGGC-A---ATAACA-T-TTT-TTA--GAACTT--A-C---------------G
i Macaca_maura.k141_251854                              I 49 C 0
s Macaca_mulatta.NC_041755.1                            196040569 30 + 196197964 ----------------TATCGGC-A---ATAACA-T-TTT-TTA--GAACTT--A-C---------------G
i Macaca_mulatta.NC_041755.1                            I 49 C 0
s Macaca_nemestrina.KQ004885.1                           11450739 30 +  11645122 ----------------TATCGGC-A---ATAACA-T-TTT-TTA--GAACTT--A-C---------------G
i Macaca_nemestrina.KQ004885.1                          I 49 C 0
s Macaca_nigra.k141_282495                                   9425 30 -     46448 ----------------TATCGGC-A---ATAACA-T-TTT-TTA--GAACTT--A-C---------------G
i Macaca_nigra.k141_282495                              I 49 C 0
s Macaca_radiata.k141_3680256                                7086 30 -     13212 ----------------TATCGGC-A---ATAACA-T-TTT-TTA--GAACTT--A-T---------------G
i Macaca_radiata.k141_3680256                           I 49 C 0
s Macaca_siberu.k141_741907                                 20768 30 -     55006 ----------------TATCGGC-A---ATAACA-T-TTT-TTA--GAACTT--A-C---------------G
i Macaca_siberu.k141_741907                             I 49 C 0
s Macaca_silenus.Contig12                                43846190 30 +  43892939 ----------------TATCGGC-A---ATAACA-T-TTT-TTA--GAACTT--A-C---------------G
i Macaca_silenus.Contig12                               I 356 C 0
s Macaca_thibetana.k99_662710                               22052 30 -     24607 ----------------TATCGCC-A---ATAACA-T-TTT-TTA--GAACTT--A-C---------------G
i Macaca_thibetana.k99_662710                           I 49 C 0
s Macaca_tonkeana.k141_2870633                               9422 30 -     27140 ----------------TATCGGC-A---ATAACA-T-TTT-TTA--GAACTT--A-C---------------G
i Macaca_tonkeana.k141_2870633                          I 49 C 0
s Macroglossus_sobrinus.MacSob_scaffold_4376               200677 37 +    248908 T----TCC--T--TT-CACTGGC-A---ATAACA-T-TTG-A-A--GAATTTA-A-G---------------G
i Macroglossus_sobrinus.MacSob_scaffold_4376            C 0 n 0
s Mandrillus_leucophaeus.scaffold125                     43442458 30 -  43563597 ----------------TATCGGC-A---ATAACA-C-TTT-TCA--GAACTT--A-C---------------G
i Mandrillus_leucophaeus.scaffold125                    I 49 C 0
s Mandrillus_sphinx.Contig144                             4455261 30 -   4543643 ----------------TATCGGC-A---ATAACA-C-TTT-TCA--GAACTT--A-C---------------G
i Mandrillus_sphinx.Contig144                           I 49 C 0
s Manis_javanica.JSZB01003966.1                            153778 37 +    252755 TC---T-C--T--GT-TACTGGC-A---ATAACA-T-CTG-A-G--GAACTTA-A-G---------------G
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             41375 37 +     58827 TC---T-C--T--GT-TACTGGC-A---ATAGCA-T-CTG-A-G--GAACTTA-A-G---------------G
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36879031 38 +  64221397 T-C-T-CT--T--TT-TACTGGC-A---ATAATA-T-TCA-A-A--GAACTTA-A-G---------------G
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       67290 22 -    234502 TC---TTC--T--TT-TACTGGC-A---ACAATA---------------------------------------
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 I 5
s Mellivora_capensis.MelCap_flattened_line_15433             8172 38 -     87323 TT---TCC--T--TT-TACCGGC-A---GTAACA-T-CTG-A-A--GAACTT-TA-T---------------G
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 3011 38 +    115071 T-C-T-TT--T--TT-TACTGGC-A---TTGACG-T-TTG-A-A--GAACTAA-T-A---------------G
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1052607 36 -  26018355 T-C-T-CT--T--AT-TACTGGT-G---TTCACA-T-TTG-A-A--AAACATA-T------------------
i Mesocricetus_auratus.KB708139.1                       C 0 I 1
s Mesoplodon_bidens.MesBid_scaffold_96348                    4085 38 -     12939 TC---TCC--T--TT-TACTGGC-A---ATAACA-G-CTG-A-A--GAACTTA-A-G---------------G
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16515246 38 +  47401472 TC---TCT--T--GT-TACTGGC-A---ATAACA-T-TTG-A-A--GAACCTA-A-G---------------G
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  42272 37 -     48017 TC---ACC--T--TG-TAATGGC-A---AGAA-A-T-GTG-A-A--GAACTTA-A-G---------------A
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               26610 38 -     32043 TC---TCC--T--TT-TACTGGC-A---ATAACA-T-TTG-A-A--GAACTTA-A-G---------------G
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22825592 38 -  98408828 T-C-A-CT--T--AT-TACTGGT-G---TTCACA-T-ATG-A-A--TAACGTA-G-G---------------G
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8214961 37 +  10048721 -C---TCC--T--TT-TACTGGC-A---ATAACA-T-TTG-A-A--GAACTTA-A-G---------------G
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            39419 37 +     45743 -C---TCC--T--TT-TATTGGC-A---ATAACA-T-TTG-A-A--GAACTTA-A-G---------------G
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         7004 30 +     29742 ----------------TATCGGC-A---ATAACA-T-TTT-TTA--GAACTT--A-T---------------G
i Miopithecus_ogouensis.k141_2935907                    I 49 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        18516 38 -    104932 TC---TCT--T--TT-TACTGGC-A---GTAACA-T-CTG-A-A--GAACTTA-A-G---------------G
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     5931 38 -     12809 TC---TCT--T--GT-TACTGGC-A---ATAACA-T-TTG-A-A--GAACCTA-A-G---------------G
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 151860 38 +    154973 TC---TCC--T--TT-TACTGGC-A---ATAACA-A-CTG-A-A--GAACTTA-A-G---------------G
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                165126 37 +    265003 TT---TCC--T---T-TACTGGC-A---ATAACA-T-TTG-A-A--GAACTT-GA-G---------------G
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  8655 38 -     19904 TC---TCC--T--TT-TACTGGC-A---ATAACA-A-CTG-A-A--GAGCTTA-A-G---------------G
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  152006 20 -    168139 TG---TCC--T--TT-TACTGGC-A---TTAA-----------------------------------------
i Mungos_mungo.MunMun_flattened_line_8729               C 0 I 7
s Murina_feae.MurFea_scaffold_2254                          25953 37 -    100666 -C---TCC--T--TT-TACTGGC-A---ATAAGA-T-TTG-A-A--GAACTTA-A-G---------------G
i Murina_feae.MurFea_scaffold_2254                      I 1 C 0
s Mus_caroli.LT608236.1                                  70772850 36 +  92629107 T-C----T--T--TT-AACTGGT-G---TTAACA-C-TTG-A-A--GAAATTA-T-G---------------A
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75494902 36 +  98207768 T-C----T--T--TT-AACTGGT-G---TTAACA-T-TTG-A-A--GAAGTTA-T-G---------------A
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67561654 36 +  89017189 T-C----T--T--TT-TACTGGG-G---TTAATG-T-TTG-A-A--GAAGTGA-T-G---------------A
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74337625 36 +  97876770 T-C----T--T--TT-AACTGGT-G---TTAACA-T-TTG-A-A--GAAGTTA-T-G---------------A
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             15676 36 +     98495 T-----CA--T--TT-TACTGAC-A---ATGACA-T-TTG-A-A--GAACTTA-A-G---------------G
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4430273 38 -  28371801 TT---TCC--T--TT-TACTGGC-A---GTAACA-T-CTG-A-A--GAACTT-TA-C---------------G
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     96406 37 -    117718 T-----CT--T--CCATCCTGGC-A---ATAATA-T-TAG-A-A--GAACTTA-A-G---------------G
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               972967 37 +   8389877 -C---TCC--T--TT-TACTGGC-A---ATAAGA-T-ATG-A-A--GAACTTA-A-G---------------G
i Myotis_brandtii.KE161952.1                            I 1 C 0
s Myotis_davidii.KB114863.1                               5024045 37 +   6462685 -C---TCC--T--TT-TACTGGC-A---ATAAGA-T-ATG-A-A--GAACTCA-A-G---------------G
i Myotis_davidii.KB114863.1                             I 1 C 0
s Myotis_lucifugus.GL429887.1                             3470474 37 -   3747815 -C---TCC--T--TT-TACTGGC-A---ATAAGA-T-ATG-A-A--GAACTTA-A-G---------------G
i Myotis_lucifugus.GL429887.1                           I 1 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        15703 37 +     66751 -C---TCC--T--TT-TACTGGC-A---ATAAGA-T-ATG-A-A--GAACTTA-A-G---------------G
i Myotis_myotis.MyoMyo_scaffold_6123                    I 1 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             8456 38 -      8794 TC---TTA--T--TT-TACTGGC-A---TTGACA-T-TTG-A-A--GAACTTA-A-G---------------G
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            125329 38 +    362372 C-C-T-CT--T--TT-TACTGGC-A---TTAACA-T-TTG-C-A--Gaactt-aa-t---------------a
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                              11267 30 +     48152 ----------------tATCGGC-A---ATAACA-T-TTT-TTA--GAACTT--A-C---------------G
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4491907 38 -  14209539 TC---TCT--T--TT-TATTGGC-A---GTAACA-T-CTG-A-A--GAACTTA-A-G---------------G
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3956451 38 -   4490290 TC---TCC--T--TT-TACTGGT-G---ATAACA-A-CTG-A-A--GAACGTA-A-G---------------G
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  52440 38 +     94413 TT---TCC--T--TT-TACTGCC-A---ATAACA-T-TTG-A-A--GAACTTA-A-G---------------G
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_762468                            1061 38 -      2755 TC---TAT--T--TT-TATTGGC-A---ATAATA-T-AAG-TTA--GAGCTT--A-C---------------G
i Nomascus_annamensis.k141_762468                       C 0 C 0
s Nomascus_concolor.k141_256540                              7671 38 -      8966 TC---TAT--T--TT-TATTGGC-A---ATAACA-T-TGT-TTA--GAGCTT--A-C---------------A
i Nomascus_concolor.k141_256540                         C 0 C 0
s Nomascus_gabriellae.k141_1400361                           1612 38 -      2203 TC---TAT--T--TT-TATTGGC-A---GTAATA-T-TTT-TTA--GAGCTT--A-C---------------G
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_453                             6924 38 +     12787 TC---TAT--T--TT-TATTGGC-A---ATAATA-T-TTT-TTA--GAGCTT--A-T---------------G
i Nomascus_siki_b.tarseq_453                        C 0 I 16
s Nomascus_siki_a.k141_421408                                  1526 38 +     16235 TC---TAT--T--TT-TATTGGC-A---ATAATA-T-TTT-TTA--GAGCTT--A-T---------------G
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                39649 38 +   3668941 TC---TCC--T--TT-TACTGGC-A---GTAACA-T-CTG-A-A--GAACCTA-A-G---------------G
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65572826 38 -  95554990 TT---TCT--T--TT-TACTGGC-A---ATAACA-T-TTG-A-A--GAACTTA-A-G---------------G
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_6040852                             463 38 +      1868 TT---TCT--T--TT-TACTGGC-A---ATAACA-T-TTG-A-A--GAACTTA-A-G---------------G
i Nycticebus_coucang.k141_6040852                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65681011 38 +  89412551 TT---TCT--T--TT-TACTGGC-A---ATAACA-T-TTG-A-A--GAACTTA-A-G---------------G
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            5000875 37 -  23139505 TC---TCT--T--TT-CACTGGA-A---ATAACA-C-TTG-A-A---AATGTA-A-G---------------G
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3691745 37 +  10294119 T-----CT--T--TTGTCCTGGC-A---ATAATA-T-CTG-A-A--GACCTTA-A-G---------------G
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             686606 38 -   3126709 TC---TCT--T--TT-TACTGGC-A---GTCACA-T-CTG-A-A--CAACTTA-A-G---------------G
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1085630 38 +   1425656 TC---TCC--T--TT-TACTGGC-A---ATAACA-A-CTG-A-A--GAACTTA-A-G---------------G
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         43696 38 +     78940 TC---TCC--T--TT-TACTGGC-A---ATAACA-A-CTG-A-A--GAACTTA-A-G---------------G
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  131400 38 +    145789 T-C-A-CT--G--AC-TATTGGT-T---TTCACA-T-TTG-A-A--TAACACA-A-G---------------G
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  44321 38 +     62360 T-C-T-CT--T--AT-TACTAGT-G---TTCACA-T-TTG-A-A--GAACTGA-T-G---------------G
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7230132 38 -   7562323 TC---TCC--T--TT-TACTGGC-A---ATAACA-A-CCG-A-A--GAACTTA-A-G---------------G
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              64986 37 -     66828 TC---CTA--T--TT-TAGTGAC-A---ATAA-A-T-TTA-A-A--GAACTTA-A-G---------------A
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141884818 38 + 163896628 TC---TCC--T--TT-TCCTGGA-A---GTAACA-T-TTG-A-A--GAACTTA-A-G---------------A
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      316786 38 -    505867 TC---TCC--T--TT-TACTGGC-A---GTAACA-T-CTG-A-A--GAACTTA-A-G---------------G
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        5954 38 -     53940 TT---TCT--T--TT-TACTGGC-A---ATAACA-T-TTG-A-A--GACCTTA-A-G---------------G
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18013920 38 -  38779656 TT---TCT--T--TT-TACTGGC-A---ATAACA-T-TTG-A-A--GACCTTA-A-A---------------G
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134084888 38 - 275406953 TC---TCC--T--TT-TACTGGC-A---ATAACA-A-CTG-A-A--GAACTTA-A-G---------------G
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      86129 38 +    140051 TC---TCC--T--TT-TACTGGC-A---ATAACA-A-CTG-A-A--GAACTTA-A-G---------------G
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.AJFE02000020.1                                 371 38 -      1352 CC---TAT--T--TT-TACTGGC-A---ATAACA-T-TTT-TTA--GAACTT--A-C---------------G
i Pan_paniscus.AJFE02000020.1                           I 164 I 110
s Pan_troglodytes.NBAG03000771.1                           186297 38 +    210065 CC---TAT--T--TT-TACTGGC-A---ATAACA-T-TTT-TTA--GAACTT--A-C---------------G
i Pan_troglodytes.NBAG03000771.1                        I 47 I 16
s Panthera_onca.PanOnc_flattened_line_1615                  41552 38 +    295523 TG---TCC--T--TT-TACTGGC-A---ATAACA-T-CTG-A-A--GAACTCA-A-G---------------G
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3645368 38 +  18214204 TG---TCC--T--TT-TACTGGC-A---ATAACG-T-CTG-A-A--GAACTCA-A-G---------------G
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5035005 38 -   6340057 TG---TCC--T--TT-TACTGGC-A---ATAACA-T-CTG-A-A--GAACTCA-A-G---------------G
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1073761 38 -   1292953 TC---TCC--T--TT-TACTGGC-A---ATAACA-A-CTG-A-A--GAACTTA-A-G---------------G
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188161247 30 - 188283584 ----------------TATCGGC-A---ATAACA-C-TTT-TTA--GAACTT--A-C---------------G
i Papio_anubis.CM001492.2                               I 49 C 0
s Papio_cynocephalus.k141_45376                              4337 30 +     25005 ----------------TATCGGC-A---ATAACA-C-TTT-TTA--GAACTT--A-C---------------G
i Papio_cynocephalus.k141_45376                         I 49 C 0
s Papio_hamadryas.Contig15                               47518619 30 +  47705337 ----------------TATCGGC-A---ATAACA-C-TTT-TTA--GAACTT--A-C---------------G
i Papio_hamadryas.Contig15                              I 49 C 0
s Papio_kindae.k141_5458022                                 72610 30 -    104429 ----------------TATCGGC-A---ATAACA-C-TTT-TTA--GAACTT--A-C---------------G
i Papio_kindae.k141_5458022                             I 49 C 0
s Papio_papio.k141_979496                                   11142 30 +     14967 ----------------TATCGGC-A---ATAACA-C-TTT-TTA--GAACTT--A-C---------------G
i Papio_papio.k141_979496                               I 49 C 0
s Papio_ursinus.k141_1345919                                 7007 30 -      7628 ----------------TATCGGC-A---ATAACA-C-TTT-TTA--GAACTT--A-C---------------G
i Papio_ursinus.k141_1345919                            I 49 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    123028 38 -    135482 TG---TCC--T--TT-TACTGGC-A---ATAACA-T-CTG-A-A--GAACTTA-A-G---------------G
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          11618 38 -     23713 TT---TCT--T--TT-TACTGGC-A---ATAACA-T-TTG-A-A--GAACTTA-A-G---------------G
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           12769 38 +     61070 TT---TCT--T--TT-TACTGGC-A---ATAACA-T-TTG-A-A--GAACTTA-A-G---------------G
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       3077 38 +     49596 T--TT-CT--T--TT-TACTGAC-A---GTAACC-T-TTC-A-G--AAAGTTA-T-G---------------G
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615458.1                       2840188 31 -   3366660 T-C-T-CT--T--AT-TACTAGT-G---TTCACA-T-TTG-A-A--GAA------------------------
i Peromyscus_maniculatus.KI615458.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    17780 36 -     36578 C-----CT--T--TTTCCTCTGC-A---ATAATT-T--TG-A-A--GACATTA-A-G---------------G
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              4592 38 +      8220 TC---TCC--T--TT-TACTGGC-G---ATAACA-A-CTG-A-A--GAACGTA-A-G---------------G
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Piliocolobus_badius.k141_1987485                           4805 30 -      5908 ----------------tATCAGC-A---ATAACA-T-TTT-TTA--GAACGT--A-C---------------G
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       5424 30 -     17985 ----------------tATCAGC-A---ATAACA-T-TTT-TTA--GAACTT--A-C---------------G
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            4791 30 +      7694 ----------------tATCAGC-A---ATAACA-T-TTT-TTA--GAACTT--A-C---------------G
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26743274 30 +  26888534 ----------------TATCAGC-A---ATAACA-T-TTT-TTA--GAACTT--A-C---------------G
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306           101204 37 +    112873 -C---TCC--T--TT-TACTGGC-A---ATAACA-T-TTA-A-A--GAGCTTA-A-G---------------G
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        I 4 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990          11074 38 +     21690 TC---TCC--T--TT-TACTGGC-A---ATAACA-A-CTG-A-A--GAACTTA-A-G---------------G
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       26908 39 +     44506 TC---TCT--T--TT-TAACTTC-A---ATAACA-T-TTT-TTA--GAACTT-CA-G---------------G
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        27121 39 +     67491 TC---TCT--T--TT-TAACTTC-A---ATAACA-T-TTT-TTA--GAACTT-CA-G---------------G
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      17360 39 -     98129 TC---TCT--T--TT-TAACTTC-A---ATAACA-T-TTT-TTA--GAACTT-CA-G---------------G
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     26961 39 +    147771 TC---TCT--T--TT-TAACTTC-A---ATAACA-T-TTT-TTA--GAACTT-CA-G---------------G
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         3596 39 -     43940 TC---TCT--T--TT-TAACTTC-A---ATAACA-T-TTT-TTA--GAACTT-CA-G---------------G
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          7679 39 -     55515 TC---TCT--T--TT-TAACTTC-A---ATAACA-T-TTT-TTA--GAACTT-CA-G---------------G
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         27033 39 +    152463 TC---TCT--T--TT-TAACTTC-A---ATAACA-T-TTT-TTA--GAACTT-CA-G---------------G
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       4841 39 -    119457 TC---TCT--T--TT-TAACTTC-A---ATAACA-T-TTT-TTA--GAACTT-CA-G---------------G
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         16755 39 +    134592 TC---TCT--T--TT-TAACTTC-A---ATAACA-T-TTT-TTA--GAACTT-CA-G---------------G
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          27343 39 -     75465 TC---TCT--T--TT-TAACTTC-A---ATAACA-T-TTT-TTA--GAACTT-CA-G---------------G
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              191969 38 -    373494 TC---TAT--T--TT-TATCGGC-A---ATAACA-T-TTT-TTA--GAACTT--A-T---------------G
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19812616 38 +  19899266 TC---TAT--T--TT-TATCGGC-A---ATAACA-T-TTT-TTA--GAACTT--A-T---------------G
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               8549 30 -     15069 ----------------tATCGGC-A---ATAACA-T-TTT-TTA--GAACTT--A-C---------------G
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              8664 30 +     14865 ----------------tATCGGC-A---ATAACA-T-TTT-TTA--GAACTT--A-C---------------G
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                4777 20 -      9567 TC---CCC--T--TT-TAGTGAC-C---ATAA-----------------------------------------
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 I 15
s Prolemur_simus.MPIZ01000048.1                           6853570 38 +  12164890 TT---TCT--T--GT-TACTGGC-A---ATAACA-T-TTG-A-A--GAACTTA-A-G---------------G
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     22378 38 -     30946 NN---NNN--N--NN-NNNNNNN-N---NNNNNN-N-NNN-N-N--NNNNNN-NN-N---------------N
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         8674 38 +     11805 TC---TCT--T--TT-TACTGGC-A---ATAACA-T-TTG-A-A--GAACTTA-A-G---------------G
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           48008 38 +     52369 TC---TCT--T--TT-TACTGGC-A---ATAACA-T-TTG-A-A--GAACTTA-A-G---------------G
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         40395 38 -     44753 TC---TCT--T--TT-TACTGGC-A---ATAACA-T-TTG-A-A--GAACTTA-A-G---------------G
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            22318 38 +     27322 TC---TCT--T--TT-TACTGGC-A---ATAACA-T-TTG-A-A--GAACTTA-A-G---------------G
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       21963 38 -     53241 TC---TCT--T--TT-TACTGGC-A---ATAACA-T-TTG-A-A--GAACTTA-A-G---------------G
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         44226 38 -     48185 TC---TCT--T--TT-TACTGGC-A---ATAACA-T-TTG-A-A--GAACTTA-A-G---------------G
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           39987 38 +     77221 T-C-T-TT--T--TT-TACTGGC-A---TTGACG-T-TTG-A-A--GAACTAA-T-A---------------G
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            7778 38 -     27784 TC---TCC--T--TT-TACTGGC-A---ATAACA-T-TTG-A-A--GAACTTA-A-G---------------G
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        251919 38 -    344369 TT---TCC--T--TT-TACTGGC-A---GTAACA-T-CTG-A-A--GAACTT-TA-C---------------G
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13248583 38 -  17261082 TC---TCC--T--TT-TACTGGC-A---ATAACA-T-TTG-A-A--GAACTTA-A-G---------------G
i Pteropus_alecto.KB031157.1                            I 157 C 0
s Pteropus_vampyrus.KN525959.1                             606533 38 -   3946241 TC---TCC--T--TT-TACTGGC-A---ATAACA-T-TTG-A-A--GAACTTA-A-G---------------G
i Pteropus_vampyrus.KN525959.1                          I 18 C 0
s Puma_concolor.QAVW01000427.1                          131541492 38 - 161321710 TG---TCC--T--TT-TACTGGC-A---ATAACA-T-CTG-A-A--GAACTCA-A-G---------------G
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             32654 31 +     56732 ----------------tATCGGC-A---ATAACA-T-TTT-TTA--GAACTT--AAC---------------G
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6809151 31 +   6970761 ----------------TATCGGC-A---ATAACA-T-TTT-TTA--GAACTT--AAC---------------G
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             8540 31 +     18040 ----------------tATCGGC-A---ATAACA-T-TTT-TTA--GAACTT--AAC---------------G
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                22475 38 +     68503 TC---TCC--T--TT-TACTGGC-A---ATAACA-A-CTG-A-A--GAACTTA-A-G---------------G
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13918593 39 +  90463843 T-C----T--T--CT-TCCTGGT-ATCATTAACC-T-TTG-T-A--GAAGTTA-T-G---------------A
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1794410 38 +   2252614 TC---TTC--T--TT-TACTGGC-A---Ataaca-t-ttg-a-a--gaaatt-aa-g---------------G
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                            2920 30 -     17045 ----------------tATCGGC-A---ATAACA-T-TTT-TTA--GAACTT--A-C---------------G
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206380407 30 - 206558726 ----------------TATCGGC-A---ATAACA-T-TTT-TTA--GAACTT--A-C---------------G
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44859310 30 -  45163003 ----------------TATCGGC-A---ATAACA-T-TTT-TTA--GAACTT--A-C---------------G
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                21928 38 +    109198 TC---TCC--T--TT-TACTGGC-A---ATAACA-T-TTG-A-A--GAACTTA-A-G---------------G
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            I 35 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                      3158 38 -      4338 TC---TCC--T--TT-TACTGTC-A---ATAACA-A-CTG-A-A--GAACTTA-A-G---------------G
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15677362 39 -  43202129 TC---TCT--T--TT-TACCAGC-A---ATAACA-T-TTT-TTA--GAACTT-CA-G---------------G
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        9275 40 +     34089 TC---TCT--T--TT-TACCAGC-A---ATAACA-TTTTT-TTA--GAACTT-CA-G---------------G
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              9215 39 -     60842 TC---TCT--T--TT-TACCAGC-A---ATAACA-T-TTT-TTA--GAACTT-CA-G---------------G
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              9309 39 +     67014 TC---TCT--T--TT-TACCAGC-A---ATAACA-T-TTT-TTA--GAACTT-CA-G---------------G
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              9286 39 +     60816 TC---TCT--T--TT-TAACAGC-A---ATAACA-T-TTT-TTA--GAACTT-CA-G---------------G
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 9223 39 -     76454 TC---TCT--T--TT-TAACAGC-A---ATAACA-T-TTT-TTA--GAACTT-CA-G---------------G
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17345988 39 -  30362882 TC---TCT--T--TT-TATGAGC-A---ATAACA-T-TTT-TTA--GAAATT-CA-G---------------G
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         25309 39 -     62485 TC---TCT--T--TT-TATGAGC-A---ATAACA-T-TTT-TTA--GAAATT-CA-G---------------G
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   41201 34 -    114521 ------CA--T--TT-TACTGTC-A---ATAACA-T-TTG-A-A--GA-CGTA-A-G---------------G
i Scalopus_aquaticus.ScaAqu_scaffold_9300               I 6 C 0
s Semnopithecus_entellus.k141_1572367                        6156 30 +     15331 ----------------tATCGGC-A---ATAACA-T-TTT-TTA--GAACTT--A-C---------------G
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      11531 30 +     20762 ----------------tATCGGC-A---ATAACA-T-TTT-TTA--GAACTT--A-C---------------G
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         121535 30 +    130994 ----------------TATCGGC-A---ATAACA-T-TTT-TTA--GAACTT--A-C---------------G
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           40315 30 +     46263 ----------------tATCGGC-A---ATAACA-T-TTT-TTA--GAACTT--A-C---------------G
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     33460 30 +     42640 ----------------tATCGGC-A---ATAACA-T-TTT-TTA--GAACTT--A-C---------------G
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        16482 30 +     30600 ----------------tATCGGC-A---ATAACA-T-TTT-TTA--GAACTT--A-C---------------G
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  106492 38 -    120886 T-C-T-CT--T--AT-TACCAAT-G---TTCACA-T-TTT-A-A--GAACTT-CT-G---------------G
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            25863 38 +    739146 TC---ATC--T--CT-TACTGGC-A---ATAATA-T-TTG-A-A--GAATTTA-A-A---------------G
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17776191 37 -  27805282 TC---TCC--T--TT-TACTGGC-A---ATAACA-T-CTG-A-A--GGACCT--G-G---------------G
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2244865 38 +   2842873 T-C-T-CT--T--TT-TACTGGC-A---ATAATA-T-TAG-A-A--GAACTTA-A-G---------------G
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             240696 38 -    276980 TC---TTC--T--TT-TACTGGC-A---GTAACA-T-CTG-A-A--GAACTTA-A-C---------------T
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            34896 38 +     62062 TG---TCC--T--TT-TACTGGC-A---TTAACA-T-CTG-A-A--GAATTTA-A-G---------------G
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189276896 38 + 218635234 TC---TTC--T--TT-TACTGGT-A---ATAACA-A-CTG-A-A--GAACTTA-A-G---------------G
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        19649 38 -  13920577 TC---TAT--T--TT-TATTGGC-A---ATAATA-T-TTT-TTA--GAGCTT--A-C---------------G
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                4037 38 +     20549 TC---TCC--T--TT-TACTGGC-A---ATAACA-C-TGG-A-A--GAACTTA-A-G---------------G
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               18130 38 +     45698 TC---TTA--T--TT-TACCGGC-A---TTGACA-T-TTG-A-A--GAACTTA-A-G---------------G
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      812484 38 +   1148477 TC---TCC--T--TT-TACTGGC-A---ATAACA-T-CTG-A-A--GAACTTA-A-C---------------G
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  63126 38 +     99546 TC---TCC--T--TT-TACTGGC-A---ATAACA-T-CTG-A-A--GAACTTA-A-C---------------G
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194012780 30 - 194193292 ----------------TATCGGC-A---ATAACA-C-TTT-TTA--GAACTT--A-C---------------G
i Theropithecus_gelada.CM009951.1                       I 49 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                  1320 32 -      3104 ----------T--AT-TACTGGC-A---ATAACA-T-TTG-A-A--AAACTTA-A-G----------------
i Tolypeutes_matacus.TolMat_scaffold_475685             I 2 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  139785 38 -    259118 TC---TCC--T--TT-TACTGGC-A---ATAACA-T-TTG-A-A--GATCTTA-A-G---------------G
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        29803 30 +     38948 ----------------tATCGGC-A---ATAACA-T-TTT-TTA--GAACTT--A-C---------------G
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   23363 30 -     32910 ----------------tATCGGC-A---ATAACA-T-TTT-TTA--GAACTT--A-C---------------G
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      5264 30 -     12939 ----------------tATCGGC-A---ATAACA-T-TTT-TTA--GAACTT--A-C---------------G
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       4692 30 -     14244 ----------------tATCGGC-A---ATAACA-T-TTT-TTA--GAACTT--A-C---------------G
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           46085 30 -     54611 ----------------tATCGGC-A---ATAACA-T-TTT-TTA--GAACTT--A-C---------------G
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        3886 30 -     11566 ----------------tATCGGC-A---ATAACA-T-TTT-TTA--GAACTT--A-C---------------G
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     6070 30 -     15592 ----------------tATCGGC-A---ATAACA-T-TTT-TTA--GAACTT--A-C---------------G
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          4722 30 +     14371 ----------------tATCGGC-A---ATAACA-T-TTT-TTA--GAACTT--A-C---------------G
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   3008 30 +     12481 ----------------tATCGGC-A---ATAACA-T-TTT-TTA--GAACTT--A-C---------------G
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        2989 30 -     24393 ----------------tATCGGC-A---ATAACA-T-TTT-TTA--GAACTT--A-C---------------G
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       8133 30 -     28054 ----------------tATCGGC-A---ATAACA-T-TTT-TTA--GAACTT--A-C---------------G
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44662917 30 -  44834318 ----------------TATCGGC-A---ATAACA-T-TTT-TTA--GAACTT--A-C---------------G
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       5229 30 +     13828 ----------------tATCGGC-A---ATAACA-T-TTT-TTA--GAACTT--A-C---------------G
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                  10643 38 +     90398 TC---TCT--T--TT-TACTGGC-A---ATAACA-A-CTG-A-A--GAACTTA-A-G---------------G
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16090661 37 +  31416278 TC---CCC--T--TT-TAGTGAC-A---ATAA-A-T-TTG-A-A--GAACTTA-A-G---------------G
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2801914 38 -   3938065 TC---TCT--T--TT-TACTGGC-A---ATAGCA-T-TTA-A-A--GAACTTA-A-G---------------A
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                   10742 38 +     13056 TC---TCT--T--TT-TACTGGC-A---ATAATA-T-TTA-A-A--GAACTTA-A-G---------------A
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69318862 38 -  96451834 TC---TCC--T--TT-TACTGGC-A---ATAACA-A-CCG-A-A--GAACTTA-A-G---------------G
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                    1599 38 +    136657 TC---TCC--T--TT-TACTGGA-A---ATAGTA-C-TTG-A-A--GATCTTA-A-G---------------A
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 C 0
s Ursus_maritimus.KK498671.1                              6522344 38 +  28682327 TC---TCC--T--TT-TACTGGC-A---GTAACA-T-CTG-A-A--GAACTTA-A-G---------------G
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                 10239 38 -     20643 TC---TCT--G--GT-TACTGGC-A---ATAACA-T-TTG-A-A--GAACTTA-A-G---------------G
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             29774 38 -     33872 TC---TCT--G--GT-TACTGGC-A---ATAACA-T-TTG-A-A--GAACTTA-A-G---------------G
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1529889 38 -   2331223 TC---TCC--T--TT-TACTGGC-A---GTAACA-A-CCA-A-A--GAACTTA-A-G---------------G
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                146013 38 -    281493 TC---TCC--T--TT-TACTGGC-A---GTAACA-T-CTG-A-A--GAACTTA-A-G---------------G
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       132361 38 -    134049 T-CCT-TT--T--TT-CACTGGC-A---ATA-TA-T-TTG-A-A--GAACTTA-A-A---------------G
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        221467 38 -    227762 TC---TCT--T--TT-TACTGGC-A---GTCACA-T-CTG-A-A--CAACTTA-A-G---------------G
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_202118                     2039 28 -      3360 ------------------CCTGT-C---ATATCA-T-TTG-G-A--GAACTTA-T-G---------------G
i Zapus_hudsonius.ZapHud_scaffold_202118                I 6 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            3447 38 -     13665 TC---TCC--T--TT-TACTAGC-A---ATAACA-A-CTG-A-A--GAACTTA-A-G---------------G
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Hylobates_pileatus_a.tarseq_592                             37267 2881 -     60944 I
e Tarsius_wallacei.k141_48636                               64696  0 +     65473 C
e Tarsius_lariang.k141_609102                               31387  0 +     42269 C
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Cephalopachus_bancanus.k141_702587                        12545  0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530  0 +    345090 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               18400 16 +    209709 G-C-ATACAA-AATAGACC
s Acinonyx_jubatus.LLWD01000356.1                         2041175 16 +   3721120 G-C-ATATGA-AATAGACC
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    118873 16 -    189883 G-C-TTGTGA-AACAAATT
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10665115 16 +  23371972 G-C-ATATGA-AATAGACC
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7102064 16 -  16596857 G-C-ATATGA-AATAGACC
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_141108                   2249 16 -      7259 A-C-ATGTAA-AATAGACC
i Allactaga_bullata.AllBul_scaffold_141108              C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   6287 16 -     60446 G-C-ATACAA-AATAGACC
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         7001 16 -     29318 G-C-AAAAAA-AATAGACC
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         5939 16 +     38766 G-C-ATAAAA-AATAGACC
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          6897 16 -     80423 G-C-AAAAAA-AATAGACC
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              1850 16 +     19852 G-C-ATACAG-AATAGACC
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                4073 16 -     12443 G-C-ATACAG-AATAGACC
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                             1393 16 +      5070 G-C-ATACAG-AATAGACC
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                 1140 16 -      1641 G-C-ATACAG-AATAGACC
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          3879 16 -     24210 G-C-ATACAG-AATAGACC
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_494922                              383 16 -      8325 G-C-ATACAG-AATAGACC
i Alouatta_nigerrima.k141_494922                        C 0 C 0
s Alouatta_palliata.k141_405616                              6297 16 +     16794 G-C-ATACAG-AACAGACC
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_347198                              326 16 +      9111 G-C-ATACAG-AATAGACC
i Alouatta_puruensis.k141_347198                        C 0 C 0
s Alouatta_seniculus.k141_790278                             5574 16 -      9835 G-C-ATACAG-AATAGACC
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3528320 16 +   4113121 G-C-ATAGGA-AACAGAGC
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      394407 16 -    631301 G-C-ATATGA-AATAGACT
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             5481 16 +     55446 G-C-ATATTA-AATAGACC
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 67183 16 +     78111 G-C-ATACAG-AATAGACC
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                           10127 16 +     22701 G-C-ATACAG-AATAGACC
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5754094 16 +   9889416 G-C-ATACAG-AATAGACC
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                            10671 16 -    104377 G-C-ATACAG-AATAGACC
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                              10700 16 +     23246 G-C-ATACAG-AATAGACC
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     3352 16 +     11424 A-C-ATTTAA-AATAGACC
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        7279 16 +      9265 G-C-TTATGA-AATAGATT
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                12700 16 -     29036 G-C-ATATGA-AATAGACT
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9543984 16 +  39197703 G-C-ATACAG-AATAGACC
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             65258 16 +     85812 G-C-ATACAG-AATAGACC
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                16271 16 +     89302 G-C-ATACAG-AATAGACC
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             20772 16 -     58268 G-C-ATACAG-AATAGACC
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             68766 16 +    119057 G-C-ATACAG-AATAGACC
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              10735 16 -     25888 G-C-ATACAG-AATAGACC
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                11804 16 -     16375 G-C-ATATGA-AATAGATG
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               5420 16 +      6337 G-C-ATATAA-AATAGATG
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26385709 16 +  51448160 G-C-ATATGA-AATAGACC
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                       10882 16 -     13118 G-C-ATATGA-AATAGACC
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   50291 16 -     72089 G-C-ATATGA-AATAGACC
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   305239 16 -   6870073 G-C-ATATGA-AATAGACC
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22959345 16 + 161108492 G-C-ATATGA-AATAGACC
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     421524 16 +    998990 G-C-ATATGA-AGTAGACC
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22667997 16 + 158972876 G-C-ATATGA-AATAGACC
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               676835 16 +   1914593 G-C-ATATGA-AATAGACC
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Camelus_bactrianus.KN276303.1                           3224819 16 -   8989139 G-C-ATATGA-AATAGAAC
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           402519 16 -  15254737 G-C-ATATGA-AATAGAAC
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2978257 16 +   6889770 G-C-ATATGA-AATAGAAC
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11527967 16 +  39901454 G-C-ATGTGA-AATAGACC
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   22941 16 +     87036 G-C-ATGTGA-AATAGACC
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11274864 16 -  35597290 G-C-ATGTGA-AATAGACC
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11097361 16 +  39895921 G-C-ATGTGA-AATAGACC
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16464146 16 -  44759192 G-C-ATGTGA-AATAGACC
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21335753 16 + 157394656 G-C-ATAGGA-AACAGAGC
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135714106 16 - 157403528 G-C-ATAGGA-AACAGAGC
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_780116                   340 16 +      1571 G-C-ATGTAA-AATAGAGC
i Capromys_pilorides.CapPil_scaffold_780116             C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               63694 16 +     67245 G-C-ATATGA-AATAGACT
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_1326                      814 16 -    202837 T-C-ATGTAA-AATAGACC
i Castor_canadensis.CasCan_scaffold_1326                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   164564 16 -    276539 G-C-ATAGGA-AATAGACC
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15790498 16 -  24422027 N-N-NNNNNN-NNNNNNNN
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15802437 16 -  24440124 A-C-ATGTAA-ACTAGACC
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       180609 16 +    436027 A-C-ATGTAA-ACTAGACC
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18896339 16 -  29618158 G-C-ATACAG-AATAGACC
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                12989 16 -     26817 G-C-ATACAG-AATAGACC
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                17233 16 +     25043 G-C-ATACAG-AATAGACC
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4369789 16 +   7569818 G-C-ATATGA-GATAGACC
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Cercocebus_atys.KQ010443.1                              6560227 16 +   6739814 G-C-ATACAA-AATAGACC
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      31704 16 +     60454 G-C-ATACAA-AATAGACC
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          6908 16 -     21101 G-C-ATACAA-AATAGACC
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         64218 16 -    107033 G-C-ATACAA-AATAGACC
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        7078 16 -     17608 G-C-ATACAA-AATAGACC
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          4246 16 +     45019 G-C-ATACAA-AATAGACC
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           4522 16 +     15177 G-C-ATACAA-AATAGACC
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          7128 16 +     16677 G-C-ATACAA-AATAGACC
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           29324 16 +     35983 G-C-ATACAA-AATAGACC
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11995849 16 +  12117833 G-C-ATACAA-AATAGACC
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46482831 16 +  46592721 G-C-AAACAA-AATAGACC
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                        942 16 -     27215 G-C-ATACAA-AATAGACC
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       7142 16 +     35577 G-C-ATACAA-AATAGACC
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        6936 16 -     25661 G-C-ATACAA-AATAGACC
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        7108 16 -     17744 G-C-ATACAA-AATAGACC
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        26477 16 +     37128 G-C-ATACAA-AATAGACC
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           5503 16 -      6963 G-C-ACATAA-AATAGACT
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           64020 16 -     68416 G-C-ATAAGA-AATAAATG
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_854352                             322 16 +     27737 G-C-ATAAGA-AATAAATG
i Cheirogaleus_medius.k141_854352                       C 0 C 0
s Cheracebus_lucifer.k141_619653                            10295 16 -     18223 G-C-ATACAG-AATAGACC
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              2036 16 +    188999 G-C-ATACAG-AATAGACC
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           46335 16 +     57117 G-C-ATACAG-AATAGACC
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          51015 16 +     54541 G-C-ATACAG-AATAGACC
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15965187 16 +  43084221 A-C-ATGTGA-AATAGATC
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         75816 16 +    196370 G-C-ATACAG-AATAGACC
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          19997 16 +     40510 G-C-ATACAG-AATAGACC
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15144662 16 -  15256731 G-C-ATAAAA-AATAGACC
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      39126 16 -     53260 G-C-ATAAAA-AATAGACC
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101149685 16 + 101219884 G-C-ATAAAA-AATAGACC
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                19525 16 -     21363 G-C-ACATAA-AATAGACC
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           764829 16 +    964067 G-C-acataa-aatagacc
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_304221               110 16 -      7053 G-C-ATGTGA-AACATACC
i Chrysochloris_asiatica.ChrAsi_scaffold_304221         C 0 I 10
s Colobus_angolensis.KN985967.1                          10889457 16 +  10971483 G-C-ATACAA-AATAGACC
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147667385 16 + 156195979 G-C-ATACAA-AATAGACC
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            19368 16 +     23629 G-C-ATACAA-AATAGACC
i Colobus_polykomos.k141_1406057                        I 3 C 0
s Condylura_cristata.JH655880.1                          60623818 16 +  78930452 G-C-Agaaga-aataaacc
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         4200 16 -      5782 G-C-AAATGA-CATAGTCC
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    I 5 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 283782 16 -    399297 G-C-ATGTAA-AACAGAAT
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53036103 16 +  72327488 A-C-AAGTGA-AACGAATC
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              3713 16 -     22648 G-C-ACATGA-AATAGACA
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            59187 16 -     70449 G-C-ATATGA-AATAGACC
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  215925 16 -    956709 G-C-ACGTAA-AATAAGCC
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 36707 16 -     67205 G-C-ATGTAA-AATGGAGC
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                21692 16 +     26546 C-C-ATGTAA-AATAGACC
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             62835 16 -    236241 A-C-ATGTAA-AATAGACC
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          186547 16 -   6883506 G-c-acataa-aatagact
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16849966 16 +  31942871 G-C-ATATGA-AATAGATG
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80042305 16 -  96802777 G-C-ATATGA-AATAGACC
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18702910 16 -  18957592 G-C-ATatga-aatagact
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 328188 16 +    993696 G-C-ATATGA-GATAGACC
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   8822 16 +    151128 G-C-ATATGA-GATAGACC
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   160659 14 +    228994 A-C-ATTT---AACAGATC
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3661113 15 +   4240102 G-C-ATATAA-AAG-TTTC
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  3487 15 -     11986 G-C-ATATAA-AAG-TTTC
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                41400 16 -     73477 G-C-ATGTAA-ACTAGACC
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           23000742 16 -  44670279 G-C-ATGAGT-AACAGAAC
i Echinops_telfairi.JH980316.1                          C 0 I 10
s Eidolon_helvum.KE772537.1                                 14910 16 +     24177 G-C-atatga-aatagact
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1498234 16 +   1727528 G-C-ATATGA-AATAGACC
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7834987 16 +  15467074 G-T-ATGCTA-AATAGAGC
i Elephantulus_edwardii.JH947210.1                      C 0 I 119
s Ellobius_lutescens.LOEQ01003611.1                        244805 16 -    369425 G-C-ATGTGA-AATGAATC
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01076532.1                           1149 16 +      9159 G-C-ATGTGA-AATGAATC
i Ellobius_talpinus.LOJH01076532.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85879113 16 +  99434291 G-C-ATATGA-AATAGACC
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4710677 16 +   6522550 G-C-ATATGA-AATAGACT
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5858051 16 -   7175178 G-C-ATATGA-AATAGACC
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13356537 16 +  41866177 G-C-ATATGA-AATAGACC
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          18027 16 +     92910 G-C-ATATGA-AATAGACC
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11543204 16 +  16010500 G-C-ATATGA-AATAGACC
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48781695 16 -  48907691 G-C-ATAAAA-AATAGACC
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          320552 16 +    330699 G-C-ATATGA-AATAGACC
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             67008 16 +     89355 G-C-ATATGA-AATAGACC
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                             10088 16 +     13586 G-C-ATATGA-AACAGATG
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_1015201                              3347 16 -      4292 G-C-ATATGA-AACAGATG
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            16484 16 +     36558 G-C-ATATGA-AACAGATG
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            12806 16 +     60246 G-C-ATATGA-AACAGATG
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                16291 16 +    109717 G-C-ATATGA-AACAGATG
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 4274 16 -     19505 G-C-ATATGA-AACAGATG
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                20949 16 +     27497 G-C-ATATGA-AATAGATG
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           23405 16 +     26808 G-C-ATATGA-AACAGATG
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                38137 16 +     46535 G-C-ATATGA-AACAGATG
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              20878 16 -     29447 G-C-ATATGA-AACAGATG
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129900824 16 - 159252932 G-C-ATATGC-AATAGACC
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129287801 16 - 158578461 G-C-ATATGC-AATAGACC
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 28991 16 +     52776 G-C-ATATGC-AATAGACC
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13897129 16 -  19261668 g-c-aTAAAA-AATAGATC
i Fukomys_damarensis.KN123630.1                         I 155 C 0
s Galago_moholi.ctg555                                     216131 16 -    847004 G-C-TTGTGA-AATAGATC
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           18492 16 -     43889 G-C-TTGTGA-AATAGATC
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          15634 16 +     27357 G-C-TTGTGA-AATAGATC
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               160408 16 +    324696 G-C-ATATAA-AACAAATA
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    188014 16 -    189561 G-C-ATATGA-AATAGACC
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           17305 15 -     18683 G-C-ATG-AA-AATAGACC
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                              10097 16 -     14630 G-C-ATACAA-AATAGACC
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119657197 16 - 195582420 G-C-ATACAA-AATAGACC
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   80625 15 +    118900 G-C-ATG-AA-CATAGACC
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         6878 16 +     10286 G-C-ATATGA-AATAGATG
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             5359 16 -     11661 G-C-ATATGA-AATAGATG
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                            10683 16 +     56096 G-C-ATATGA-AATAGACG
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        33932 16 -     42470 G-C-ATATGA-AATAGATG
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        50558 16 -     54384 G-C-ATATGA-AATAGATG
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              24304 16 +     53719 G-C-ATATAA-AATAGACT
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                35144 16 -     91191 G-C-ATAGGA-AACAGAGC
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2561475 16 +  31725842 G-C-ATATAA-AATAAACC
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               63708 16 +     73687 G-C-AAGTGA-AACAAATC
i Heterohyrax_brucei.HetBruBak_scaffold_25354           I 15 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              152357 16 +    277961 G-C-ATATGA-AATAGACC
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      285397 15 -    477199 G-C-AGACGA-TGCA-ACT
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959               3083 15 +     26078 G-C-ATACGA-TGTA-ACT
i Hipposideros_galeritus.HipGal_scaffold_52959          C 0 C 0
s Hoolock_leuconedys.ctg79                                     10022 16 -   7690867 G-C-ATACAA-AATAGACC
i Hoolock_leuconedys.ctg79                                 I 38 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 24742 16 -     67322 G-C-ATATGA-AATAGGCC
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           22041 16 -    119109 G-T-ATGTAA-ACTACACC
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_1816750                             2593 16 +      3202 G-C-ATACAA-AATAGACC
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1136966                               602 16 +      9785 G-C-ATACAA-AATAGACC
i Hylobates_agilis.k141_1136966                         C 0 C 0
s Hylobates_klossii.k141_468230                              4082 16 +      5464 G-C-ATACAA-AATAGACC
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14629428 16 -  25970782 G-C-ATACAA-AATAGACC
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            1980 16 +      4161 G-C-ATACAA-AATAGACC
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                    10368 16 +     22540 G-A-ATATAA-AATAGATC
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7131202 16 +  13083262 G-C-ATCTTA-AATAGACC
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   2416 16 +      3484 G-C-ATATGA-AATAGATG
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              14529 16 +     17520 G-C-ATATGA-AATAGACC
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8579996 16 +  11848649 A-C-ATGTAA-ATTAGACC
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               29148 16 +     37189 G-C-ATATGA-AATAGACC
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          54856 16 -    147782 G-C-ATACAG-AATAGACC
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    7227 16 +     26176 G-C-ATATGA-AATAGAGT
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258412236 16 - 285822530 G-C-ATATGA-AATAGATG
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        29560 16 +     39228 G-C-ATGTGA-AATAAAAG
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            58924 16 +     63517 G-C-ATGTGA-AATAAAAG
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        37306 16 -     38897 G-C-ATATGA-AATAAAAG
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      3350 16 -     13103 G-C-ATGTGA-AATAAAAG
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3093058 16 -   3498232 G-C-TTATGA-AATAGACC
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    21840 16 +     22452 G-C-ATATAA-AATAGGCC
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            141470 16 +   3060487 G-C-ATATGA-AATAGACC
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19253316 16 +  19376315 G-C-ATACAA-AATAGACC
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           16094 16 +     84689 G-C-TTACAA-AATAGATC
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3783829 16 +   6799190 G-C-TTACAA-AATAGATC
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20599627 16 -  62548349 G-C-ATGTGA-AATAGATC
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11096817 16 +  39895028 G-C-ATGTGA-AATAGACC
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             25065 16 +     74745 G-C-ATACAA-AATAGACC
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12711528 16 +  12821369 G-C-ATACAA-AATAGACC
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                4101 16 -     26467 G-C-ATACAA-AATAGACC
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           51972 16 +     63263 G-C-ATACAA-AATAGACC
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 4082 16 -     26361 G-C-ATACAA-AATAGACC
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_2667654                                 385 16 -      5626 G-C-ATACAA-AATAGACC
i Macaca_leonina.k141_2667654                           C 0 C 0
s Macaca_maura.k141_251854                                  50501 16 -     79256 G-C-ATACAA-AATAGACC
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196040599 16 + 196197964 G-C-ATACAA-AATAGACC
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11450769 16 +  11645122 G-C-ATACAA-AATAGACC
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   9455 16 -     46448 G-C-ATACAA-AATAGACC
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                7116 16 -     13212 G-C-ATACAA-AATAGACC
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 20798 16 -     55006 G-C-ATACAA-AATAGACC
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43846220 16 +  43892939 G-C-ATACAA-AATAGACC
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               22082 16 -     24607 G-C-ATACAA-AATAGACC
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               9452 16 -     27140 G-C-ATACAA-AATAGACC
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                703543 16 +    802869 G-C-ATATGA-AATAGACT
i Macroglossus_sobrinus.MacSob_scaffold_879             I 68 C 0
s Mandrillus_leucophaeus.scaffold125                     43442488 16 -  43563597 G-C-ATACAA-AATAGACC
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4455291 16 -   4543643 G-C-ATACAA-AATAGACC
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            153815 16 +    252755 G-C-ATATGA-AATAGACC
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             41412 16 +     58827 G-C-ATATGA-AATAGACC
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36879069 16 +  64221397 G-C-ATCTTA-AATAGACC
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       67317 16 -    234502 G-C-ATATGA-CACAGACT
i Megaderma_lyra.MegLyr_scaffold_3562                   I 5 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             8210 16 -     87323 G-C-ATATGA-AATAGACC
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 3049 16 +    115071 G-C-ATGGAA-AACAGATC
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1052644 16 -  26018355 G-C-ATGTGA-AATGAATC
i Mesocricetus_auratus.KB708139.1                       I 1 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    4123 16 -     12939 G-C-ATATGA-AATAGACC
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16515284 16 +  47401472 G-C-ATAAGA-AATAGATG
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  42309 16 -     48017 G-C-ATGAGT-AATGGAAC
i Microgale_talazaci.MicTal_scaffold_34660              C 0 I 10
s Micronycteris_hirsuta.MicHir_scaffold_37978               26648 16 -     32043 G-C-ATGTGA-AATAGACT
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22825630 16 -  98408828 G-C-ATGTAA-AATGAATC
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8214998 16 +  10048721 G-C-ATATGA-AATAGACT
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            39456 16 +     45743 G-C-ATATGA-AATAGACT
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         7034 16 +     29742 G-C-ATACAA-AATAGACC
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        18554 16 -    104932 G-C-TTATGA-AATAGACC
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     5969 16 -     12809 G-C-ACAATA-AATAGATG
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 151898 16 +    154973 G-C-ATATGA-AATAGACC
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                165163 16 +    265003 G-C-ATATGA-AATAGACT
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  8693 16 -     19904 G-C-ATATGA-AATAGACC
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  152033 16 -    168139 G-C-ATACAA-AATAGACC
i Mungos_mungo.MunMun_flattened_line_8729               I 7 C 0
s Murina_feae.MurFea_scaffold_2254                          25990 16 -    100666 G-C-ATATGA-AATAGACT
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70772886 16 +  92629107 G-C-ATGTAA-AACAGGTC
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75494938 16 +  98207768 G-C-ATGTAA-AACAGATC
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67561690 16 +  89017189 A-C-ATGTAA-AACAGACC
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74337661 16 +  97876770 G-C-ATGTAA-AACAGATC
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             15712 15 +     98495 A-T-GTG-AA-AACAAACA
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4430311 16 -  28371801 G-C-ATATGA-AATAGACC
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     96443 16 -    117718 G-C-AAGTAA-AATAGAGC
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               973004 16 +   8389877 G-C-ATATGA-AATAGACT
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5024082 16 +   6462685 G-C-ATATGA-AATAGACT
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3470511 16 -   3747815 G-C-ATATGA-AATAGACT
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        15740 16 +     66751 G-C-ATATGA-AATAGACT
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             8494 16 -      8794 G-C-AGATAA-AATAGACC
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            125367 17 +    362372 gat-gcagaa-agtaggcc
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                              11297 16 +     48152 G-C-ATACAA-AATAGACC
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4491945 16 -  14209539 G-C-TTATGA-AATAGACC
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3956489 16 -   4490290 G-C-ATATGA-AATAGACC
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  52478 16 +     94413 G-C-ATATGA-AATAGACT
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_762468                            1099 16 -      2755 G-C-TTACAA-AATAGACC
i Nomascus_annamensis.k141_762468                       C 0 C 0
s Nomascus_concolor.k141_256540                              7709 16 -      8966 G-C-ATACAA-AATAGACC
i Nomascus_concolor.k141_256540                         C 0 C 0
s Nomascus_gabriellae.k141_1400361                           1650 16 -      2203 G-C-ATACAA-AATAGACC
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_2374                            4170 16 +      8673 G-C-ATACAA-AATAGAcc
i Nomascus_siki_b.tarseq_2374                       I 931 I 370
s Nomascus_siki_a.k141_421408                                  1564 16 +     16235 G-C-ACACAA-AATAGACC
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                39687 16 +   3668941 G-C-ATGTGA-AATAGACC
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65572864 16 -  95554990 G-C-TTATGA-AATAGATC
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_6040852                             501 16 +      1868 G-C-TTATGA-AATAGATC
i Nycticebus_coucang.k141_6040852                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65681049 16 +  89412551 G-C-TTATGA-AATAGATC
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            5000912 16 -  23139505 G-C-ATATAA-AATAGACC
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3691782 16 +  10294119 G-C-ATGTAA-AATAGGGC
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             686644 16 -   3126709 G-C-ATATGA-AATAGACC
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1085668 16 +   1425656 G-C-ATATGA-AATAGACC
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         43734 16 +     78940 G-C-ATATGA-AACAGACC
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  131438 16 +    145789 G-C-ATGTGA-AACGAATC
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  44359 12 +     62360 G-C-ATGTGA-C----ATC
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7230170 16 -   7562323 G-C-ATATGA-AATAGACC
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              65023 15 -     66828 --C-ATGTAA-AATGGACC
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 I 10
s Oryctolagus_cuniculus.CM000803.1                      141884856 16 + 163896628 G-C-ATATAA-AATAGGCC
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      316824 16 -    505867 G-C-ATGTGA-AATAGACC
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        5992 16 -     53940 A-C-TTGTGA-AATAGATC
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18013958 16 -  38779656 G-C-TTGTGA-AATAGATC
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134084926 16 - 275406953 G-C-ATAGGA-AACAGAGC
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      86167 16 +    140051 G-C-ATAGGA-AACAGAGC
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127579376 16 - 205426864 G-C-ATACAA-AATAGACC
i Pan_paniscus.CM003386.1                               I 38 I 45
s Pan_troglodytes.CM009241.2                            120156536 16 - 196562556 G-C-ATACAA-AATAGACC
i Pan_troglodytes.CM009241.2                            I 38 I 45
s Panthera_onca.PanOnc_flattened_line_1615                  41590 16 +    295523 G-C-ATATGA-AATAGACC
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3645406 16 +  18214204 G-C-GTATGA-AATAGACC
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5035043 16 -   6340057 G-C-GTATGA-AATAGACC
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1073799 16 -   1292953 G-C-ATATGA-AACAGAGC
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188161277 16 - 188283584 G-C-ATACAA-AATAGACC
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              4367 16 +     25005 G-C-ATACAA-AATAGACC
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47518649 16 +  47705337 G-C-ATACAA-AATAGACC
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 72640 16 -    104429 G-C-ATACAA-AATAGACC
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   11172 16 +     14967 G-C-ATACAA-AATAGACC
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 7037 16 -      7628 G-C-ATACAA-AATAGACC
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    123066 16 -    135482 G-C-ATATGA-AAGAGACC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          11656 16 -     23713 G-C-TTATGA-AATAGATC
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           12807 16 +     61070 G-C-TTATGA-AATAGATC
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       3115 16 +     49596 C-C-ATTTAA-AATAGTCC
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    17816 16 -     36578 G-C-ATGTAA-ACTAGAAC
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              4630 16 +      8220 G-C-ATATGA-AATAGACC
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Piliocolobus_badius.k141_1987485                           4835 16 -      5908 G-C-ATACAA-AATAGACC
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       5454 16 -     17985 G-C-ATACAA-AATAGACC
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            4821 16 +      7694 G-C-ATACAA-AATAGACC
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26743304 16 +  26888534 G-C-ATACAA-AATAGACC
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306           101241 16 +    112873 G-C-ATATGA-AATAGACT
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990          11112 16 +     21690 G-C-ATATGA-AATAGACC
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       26947 16 +     44506 G-C-ATACAG-AATAGACC
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        27160 16 +     67491 G-C-ATACAG-AATAGACC
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      17399 16 -     98129 G-C-ATACAG-AATAGACC
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     27000 16 +    147771 G-C-ATACAG-AATAGACC
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         3635 16 -     43940 G-C-ATACAG-AATAGACC
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          7718 16 -     55515 G-C-ATATAG-AATAGACC
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         27072 16 +    152463 G-C-ATACAG-AATAGACC
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       4880 16 -    119457 G-C-ATACAG-AATAGACC
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         16794 16 +    134592 G-C-ATACAG-AATAGACC
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          27382 16 -     75465 G-C-ATACAG-AATAGACC
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              192007 16 -    373494 G-C-ATACAA-AATAGACC
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19812654 16 +  19899266 G-C-ATACAA-AATAGACC
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               8579 16 -     15069 G-C-ATACAA-AATAGACC
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              8694 16 +     14865 G-C-ATACAA-AATAGACC
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                4812 16 -      9567 A-C-AAGTGA-AACAAACC
i Procavia_capensis.ProCapCap_scaffold_149274           I 15 C 0
s Prolemur_simus.MPIZ01000048.1                           6853608 16 +  12164890 G-C-ATATGA-AATAGATG
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     22416 16 -     30946 N-N-NNNNNN-NNNNNNNN
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         8712 16 +     11805 G-C-ACATGA-AATAGATG
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           48046 16 +     52369 G-C-ACATGA-AATAGATG
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         40433 16 -     44753 G-C-ATATGA-AATAGATG
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            22356 16 +     27322 G-C-ATATGA-AATAGATG
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       22001 16 -     53241 G-C-ATATGA-AATAGATG
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         44264 16 -     48185 G-C-ATATGA-AATAGATG
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           40025 16 +     77221 G-C-ATGGAA-AACAGACC
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            7816 16 -     27784 G-C-Atatga-aatagact
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        251957 16 -    344369 G-C-ATATGA-AATAGACC
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13248621 16 -  17261082 G-C-atatga-aatagact
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             606571 16 -   3946241 G-C-atatga-aatagact
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131541530 16 - 161321710 G-C-ATATGA-AATAGACC
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             32685 16 +     56732 G-C-ATACAA-AAGAGACC
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6809182 16 +   6970761 G-C-ATACAA-AAGAGACC
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             8571 16 +     18040 G-C-ATACAA-AAGAGACC
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                22513 16 +     68503 G-C-ATATGA-AATAGACC
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13918632 16 +  90463843 G-C-ATGTAA-AACAGATC
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1794448 16 +   2252614 G-C-ATATGA-CACAGACT
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                            2950 16 -     17045 G-C-ATACAA-AATGGACC
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206380437 16 - 206558726 G-C-ATACAA-AATGGACC
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44859340 16 -  45163003 G-C-ATACAA-AATGGACC
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                21966 16 +    109198 G-C-ATATGA-AATAGACT
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                      3196 16 -      4338 G-C-ATATGA-AATAGACC
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15677401 16 -  43202129 G-C-ATACCG-AATAGACC
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        9315 16 +     34089 G-C-ATACCG-AATAGACC
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              9254 16 -     60842 G-C-ATACCG-AATAGACC
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              9348 16 +     67014 G-C-ATACCG-AATAGACC
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              9325 16 +     60816 G-C-ATACCG-AATAGACC
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 9262 16 -     76454 G-C-ATACCG-AATAGACC
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17346027 16 -  30362882 G-C-ATACAG-AATAGACC
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         25348 16 -     62485 G-C-ATACAG-AATAGACC
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   41235 16 -    114521 G-T-ATAAGA-AATAAAAC
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        6186 16 +     15331 G-C-ATACAA-AATAGACC
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      11561 16 +     20762 G-C-ATACAA-AATAGACC
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         121565 16 +    130994 G-C-ATACAA-AATAGACC
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           40345 16 +     46263 G-C-ATACAA-AATAGACC
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     33490 16 +     42640 G-C-ATACAA-AATAGACC
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        16512 16 +     30600 G-C-ATACAA-AATAGACC
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  106530 16 -    120886 G-C-ATTTGA-AACAAATC
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            25901 17 +    739146 G-C-CTTTGAAAATAGACC
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17776228 16 -  27805282 G-C-ACATGA-AATAGACA
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2244903 16 +   2842873 G-C-ATCTTA-AATAGACC
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             240734 16 -    276980 G-C-ATATGA-AATAGACC
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            34934 16 +     62062 G-C-ATATAA-AATAGACC
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189276934 16 + 218635234 G-C-ATATGA-AATAGACC
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        19687 16 -  13920577 G-C-ATACAA-AATAGACC
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                4075 16 +     20549 G-C-ATATGA-AATAGACT
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               18168 16 +     45698 G-C-AGATAA-AATAGACC
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      812522 16 +   1148477 G-C-ATAAGA-AATAGACC
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  63164 16 +     99546 G-C-ATAAGA-AATAGACC
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194012810 16 - 194193292 G-C-ATACAA-AATAGACC
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                  1352 16 -      3104 G-C-ACATAA-AATAGACT
i Tolypeutes_matacus.TolMat_scaffold_475685             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  139823 16 -    259118 G-C-ATAAGA-AATAGACT
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        29833 16 +     38948 G-C-ATACAA-AATAGACC
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   23393 16 -     32910 G-C-ATACAA-AATAGACC
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      5294 16 -     12939 G-C-ATACAA-AATAGACC
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       4722 16 -     14244 G-C-ATACAA-AATAGACC
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           46115 16 -     54611 G-C-ATACAA-AATAGACC
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        3916 16 -     11566 G-C-ATACAA-AATAGACC
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     6100 16 -     15592 G-C-ATACAA-AATAGACC
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          4752 16 +     14371 G-C-ATACAA-AATAGACC
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   3038 16 +     12481 G-C-ATACAA-AATAGACC
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        3019 16 -     24393 G-C-ATACAA-AATAGACC
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       8163 16 -     28054 G-C-ATACAA-AATAGACC
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44662947 16 -  44834318 G-C-ATACAA-AATAGACC
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       5259 16 +     13828 G-C-ATACAA-AATAGACC
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                  10681 16 +     90398 A-C-ATATCA-TATAGACC
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16090698 16 +  31416278 G-C-ATGTCA-AACAGACC
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2801952 17 -   3938065 G-CCTTACGA-AATAGACT
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                   10780 17 +     13056 G-CCTTTTGA-AATAGACT
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69318900 16 -  96451834 G-C-ATATGA-AATAGACC
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                    1637 16 +    136657 G-C-ATAAGA-AATAAACT
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 C 0
s Ursus_maritimus.KK498671.1                              6522382 16 +  28682327 G-C-ATATGA-AATAGACC
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                 10277 16 -     20643 G-C-ATATGA-AATAGATG
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             29812 16 -     33872 G-C-ATATGA-AATAGATG
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1529927 16 -   2331223 G-C-ATATGA-AATAGAAC
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                146051 16 -    281493 G-C-ATGTGA-AATAGACC
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       132399 16 -    134049 G-C-ATCTTA-AATAGACC
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        221505 16 -    227762 G-C-ATATGA-AATAGACC
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_202118                     2067 16 -      3360 G-C-ATGTAA-AATAGACC
i Zapus_hudsonius.ZapHud_scaffold_202118                C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            3485 16 -     13665 G-C-ATATGA-AATAGATC
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Hylobates_pileatus_a.tarseq_592                             37267 2881 -     60944 I
e Tarsius_wallacei.k141_48636                               64696  0 +     65473 C
e Tarsius_lariang.k141_609102                               31387  0 +     42269 C
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Peromyscus_maniculatus.KI615458.1                       2840219  0 -   3366660 C
e Cephalopachus_bancanus.k141_702587                        12545  0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530  0 +    345090 C
e Cacajao_melanocephalus.k141_1160263                       12240  0 -    134917 C
e Cacajao_hosomi.k141_303789                                19697  0 -    216513 C
e Cacajao_calvus.k141_96166                                 17650  0 +    125063 C
e Cacajao_ayresi.k141_724503                               118630  0 -    171031 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               18416 45 +    209709 TTA-AATGGACTC--AGTG-TTG-------AGAAATTT-TTATAAGGCTG--C--TTTAT-T
s Acinonyx_jubatus.LLWD01000356.1                         2041191 46 +   3721120 TTA-AATGGACTTA-AGGA-CTG-------GGAAATTT-TCATAAGTGTG--t--tttat-g
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    118889 45 -    189883 TTA-AATGGGTTT--TGTT-CTG-------GGCAGTTC-TCCTAATATCA--T--TTTAT-T
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10665131 46 +  23371972 TTA-AATGGACTTA-AGTG-CTG-------GGAAATTT-TCATGAGcgtg--t--tttat-t
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7102080 45 -  16596857 -TA-AATGGACTTA-AGTG-CCG-------GGAAATTT-TCATAAGcgtg--t--tttat-t
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_141108                   2265 45 -      7259 TTA-AATCGCCAT--GTTA-CTG-------TCAAGTTT-ACATAGGGGTG--T--TTTAT-T
i Allactaga_bullata.AllBul_scaffold_141108              C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   6303 45 -     60446 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-GTATAAGGGTG--C--TTTGT-T
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         7017 45 -     29318 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-GTATAAGGGTG--C--TTTGT-T
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         5955 45 +     38766 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-GTATAAGGGTG--C--TTTGT-T
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          6913 45 -     80423 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-GTATAAGGGTG--C--TTTGT-T
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              1866 45 +     19852 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-TTATAAGGGTG--C--TTTAT-T
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                4089 45 -     12443 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-TTATAAGGGGG--C--TTCAT-T
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                             1409 45 +      5070 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-TTATAAGGGTG--C--TTTAT-T
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                 1156 45 -      1641 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-TTATAAGGGTG--C--TTTAT-T
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          3895 45 -     24210 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-TTATAAGGGTG--C--TTCAT-T
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_494922                              399 45 -      8325 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-TTATAAGGCTG--C--TTTAT-T
i Alouatta_nigerrima.k141_494922                        C 0 C 0
s Alouatta_palliata.k141_405616                              6313 45 +     16794 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-TTATAAGGGTG--A--TTTAT-T
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_347198                              342 45 +      9111 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-TTATAAGGGTG--C--TTTAT-T
i Alouatta_puruensis.k141_347198                        C 0 C 0
s Alouatta_seniculus.k141_790278                             5590 45 -      9835 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-TTATAAGGGTG--C--TTTAT-T
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3528336 46 +   4113121 TTA-AATGGACTTA-AGTG-CTG-------GGAAATTT-TAATAAGGGTG--T--TTGAT-T
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      394423 46 -    631301 TTA-AATGGACTTA-AGTG-CTG-------GGAAATTT-TCATAAGGGTG--T--TTTAT-T
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             5497 47 +     55446 TTA-AATGGACATA-AGTG-CTG-------GGAAGTTTCTAATGAGGATG--T--TTTAT-T
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 67199 45 +     78111 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-TTATAAGGGTG--C--TTTAT-T
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                           10143 45 +     22701 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-TTATAAGGGTG--C--TTTAT-T
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5754110 45 +   9889416 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-TTATAAGGGTG--C--TTTAT-T
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                            10687 45 -    104377 TTA-TATGGACTC--AGTG-CTG-------AGAAATTT-TTATAAGGGTG--C--TTTAT-T
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                              10716 45 +     23246 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-TTATAAGGGTG--C--TTTAT-T
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     3368 45 +     11424 TTA-AATGGGCTT--AGTG-CTC-------AGAAGTTT-TCTCAAGCATG--T--TTTAT-T
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        7295 36 +      9265 TTA-AATGGACTT--AATG-CTA-------GGAAATTT-TCATAAGGG--------------
i Arctocebus_calabarensis.k141_587554                   C 0 I 4
s Artibeus_jamaicensis.ArtJam_scaffold_41619                12716 45 -     29036 TTA-AATGGGCTTA-TGTG-CTG-------GGA-ATTT-TCATAAGGGTG--T--TTCAT-T
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9544000 45 +  39197703 TTA-AAGTGACTC--AGTG-CTG-------AGAAATTT-TTATAAGGGTG--C--TTTAT-T
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             65274 45 +     85812 TTA-AAGTGACTC--AGTG-CTG-------AGAAATTT-TTATAAGGGTG--C--TTTAT-T
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                16287 45 +     89302 TTA-AAGTGACTC--AGTG-CTG-------AGAAATTT-TTATAAGGGTG--C--TTTAT-T
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             20788 45 -     58268 TTA-AAGTGACTC--AGTG-CTG-------AGAAATTT-TTATAAGGGTG--C--TTTAT-T
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             68782 45 +    119057 TTA-AAGTGACTC--AGTG-CTG-------AGAAATTT-TTATAAGGGTG--C--TTTAT-T
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              10751 45 -     25888 TTA-AAGTGACTC--AGTG-CTG-------AGAAATTT-TTATAAGGGTG--C--TTTAT-T
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                11820 45 -     16375 TTA-AATGGACTT--AGTG-CTG-------GGAAATTT-TCATAAGGGTA--T--TTTAT-T
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               5436 45 +      6337 TTA-AATGGACTT--AGTG-CTG-------GGAAATTT-TCATAAGGGTA--T--TTTAT-T
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26385725 46 +  51448160 TTA-AATGGACTTA-AGTG-TTG-------GGAAATTT-TCATAAAggtg--t--tttat-t
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                       10898 46 -     13118 TTA-AATGGACTTA-AGTG-TTG-------GGAAATTT-TCATAAGggtg--t--tttat-t
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   50307 47 -     72089 TTA-AATGGACTTA-AGTG-CCG-------GGAAATTT-TAATAAGGGTG--T--TTTATGT
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   305255 46 -   6870073 TTA-AATGGACTTA-AGTG-CTG-------GGAAATTT-TAATAAGggtg--t--tttat-t
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22959361 46 + 161108492 TTA-AATGGACTTA-AGTG-CTG-------GGAAATTT-TAATAAGggtg--t--tttat-t
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     421540 46 +    998990 TTA-AATGGACTTA-AGTG-CTG-------GGAAATTT-TAATAAGggtg--t--tttat-t
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22668013 46 + 158972876 TTA-AATGGACTTA-AGTG-CTG-------GGAAATTT-TAATAAGggtg--t--tttat-t
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               676851 46 +   1914593 TTA-AATGGACTTA-AGTG-CTG-------GGAAATTT-TAATAAGggtg--t--tttat-t
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               118630 35 -    171031 -----------TC--AGTG-CTG-------AGAAATTT-TTATAAGGGTG--C--TTTAT-T
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 17650 35 +    125063 -----------TC--AGTG-CTG-------AGAAATTT-TTATAAGGGTG--C--TTTAT-T
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                19697 35 -    216513 -----------TC--AGTG-CTG-------AGAAATTT-TTATAAGGGTG--C--TTTAT-T
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       12240 35 -    134917 -----------TC--AGTG-CTG-------AGAAATTT-TTATAAGGGTG--C--TTTAT-T
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3224835 46 -   8989139 TTA-AATGGATTTA-AGTG-CTG-------GGAAATTT-TAATAAgggag--t--tttat-t
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           402535 46 -  15254737 TTA-AATGGATTTA-AGTG-CTG-------GGAAATTT-TAATAAgggag--t--tttat-t
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2978273 46 +   6889770 TTA-AATGGATTTA-AGTG-CTG-------GGAAATTT-TAATAagggag--t--tttat-t
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11527983 45 +  39901454 TTA-AATGGACTTA--GTG-CTG-------GGAAATTT-TCATAAGCATA--T--TTTAT-T
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   22957 45 +     87036 TTA-AATGGACTTA--GTG-CTG-------GGAAATTT-TCATAAGCATA--T--TTTAT-T
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11274880 45 -  35597290 TTA-AATGGACTTA--GTG-CTG-------GGAAATTT-TCataagcata--t--tttat-t
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11097377 45 +  39895921 TTA-AATGGACTTA--GTG-CTG-------GGAAATTT-TCataagcata--t--tttat-t
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16464162 45 -  44759192 TTA-AATGGACTTA--GTG-CTG-------GGAAATTT-TCataagcata--t--tttat-t
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21335769 46 + 157394656 TTA-AATGGACTTA-AGTG-CTG-------GGAAATTT-TAATAAGGGTG--T--TTGAT-T
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135714122 46 - 157403528 TTA-AATGGACTTA-AGTG-CTG-------GGAAATTT-TAATAAGGGTG--T--TTGAT-T
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_780116                   356 44 +      1571 TTA-AGTGGACTT--GGTG-CTG-------GGAAGTTT-GCACA-GAGTG--T--TTTAT-T
i Capromys_pilorides.CapPil_scaffold_780116             C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               63710 45 +     67245 TTA-AATGGACTTA-AGTG-CTG-------GGA-ATTT-TCATAAGGGTG--T--TTTAT-T
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_1326                      830 45 -    202837 TTA-AATGGACTT--AGTG-CTG-------GGAAGTTT-TCATAAGGATG--T--TTTAT-T
i Castor_canadensis.CasCan_scaffold_1326                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   164580 44 -    276539 TTA-AATGGACATA-AGTG-CTG-------GGAAGTTT-TAATGA--GCG--C--TTTAT-T
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15790514 45 -  24422027 NNN-NNNNNNNNN--NNNN-NNN-------NNNNNNNN-NNNNNNNNNNN--N--NNNNN-N
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15802453 45 -  24440124 TTA-AATGGACTT--AGTG-CTT-------TAAAGTTT-TCAGaagagta--t--tttat-t
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       180625 45 +    436027 TTA-AATGGACTT--AGTG-CTT-------TAAAGTTT-TCAGAAGAGTA--T--TTTAT-T
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18896355 45 -  29618158 TTA-AATTGACTC--AGTG-CTG-------AGAAATTT-TTATAAGGGTG--C--TTTAT-T
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                13005 45 -     26817 TTA-AATTGACTC--AGTG-CTG-------AGAAATTT-TTATAAGGGTG--C--TTTAT-T
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                17249 45 +     25043 TTA-AATTGACTC--AGTG-CTG-------AGAAATTT-TTATAAGGGTG--C--TTTAT-T
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4369805 46 +   7569818 TTA-AATAGACTTA-AGTG-CTG-------GGAAGTTT-TCCtaagtgtg--t--tttat-t
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_171732            0  8 +      8380 -------------------------------------------------G--T--TTTAT-T
i Ceratotherium_simum_cottoni.CerCot_scaffold_171732    N 0 C 0
s Cercocebus_atys.KQ010443.1                              6560243 45 +   6739814 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-GTATAAGgatg--c--tttgt-t
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      31720 45 +     60454 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-GTATAAGGATG--C--TTTGT-T
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          6924 45 -     21101 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-GTATAAGGATG--C--TTTGT-T
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         64234 45 -    107033 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-GTATAAGGATG--C--TTTGT-T
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        7094 45 -     17608 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-GTATAAGGGTG--C--TTTGT-T
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          4262 45 +     45019 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-GTATAAGGGTG--C--TTTGT-T
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           4538 45 +     15177 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-GTATAAGGGTG--C--TTTGT-T
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          7144 45 +     16677 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-GTATAAGGGTG--C--TTTGT-T
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           29340 45 +     35983 TTA-AATGGACTC--AATG-CTG-------AGAAATTT-GTATAAGGGTG--C--TTTGT-T
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11995865 45 +  12117833 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-GTATAAGGGTG--C--TTTGT-T
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46482847 45 +  46592721 TTA-AATGGACTC--AATG-CTG-------AGAAATTT-GTATAAGGGTG--C--TTTGT-T
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                        958 45 -     27215 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-GTATAAGGGTG--C--TTTGT-T
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       7158 45 +     35577 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-GTATAAGGGTG--C--TTTGT-T
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        6952 45 -     25661 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-GTATAAGGGTG--C--TTTGT-T
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        7124 45 -     17744 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-GTATAAGGGTG--C--TTTGT-T
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        26493 45 +     37128 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-GTATAAGGGTG--C--TTTGT-T
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           5519 46 -      6963 TTA-AATGGACTC-CAGTG-CTG-------GGAAATTT-TCATAAGGGCT--T--TTTAA-T
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           64036 45 -     68416 TTA-AATGGACTT--AATG-CTG-------GGAAATTT-TCATAAGGGCG--T--CTTAT-T
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_854352                             338 45 +     27737 TTA-AATGGACTT--AATG-CTG-------GGAAATTT-TCATAAGGGTG--T--CTTAT-T
i Cheirogaleus_medius.k141_854352                       C 0 C 0
s Cheracebus_lucifer.k141_619653                            10311 45 -     18223 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-TTCTAAGCGTG--C--TTTAT-T
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              2052 45 +    188999 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-TTCTAAGCGTG--C--TTTAT-T
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           46351 45 +     57117 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-TTCTAAGCGTG--C--TTTAT-T
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          51031 45 +     54541 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-TTCTAAGCGTG--C--TTTAT-T
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15965203 45 +  43084221 TTA-AATGGACTT--AGTG-CTA-------GGAAGTTT-TCACAAGagta--t--tttat-t
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         75832 45 +    196370 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-TTATAAGGGTG--C--TTTAT-T
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          20013 45 +     40510 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-TTATAAGGGTG--C--TTTAT-T
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15144678 45 -  15256731 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-GTATAAGGGTG--C--TTTGT-T
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      39142 45 -     53260 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-GTATAAGGGTG--C--TTTGT-T
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101149701 45 + 101219884 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-GTATAAGggtg--c--tttgt-t
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                19541 46 -     21363 TTA-AATGGACTCA-AGTG-CTG-------GGAAATTT-TCATAAGGGCT--T--TTTAA-T
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           764845 46 +    964067 tta-aatggaCTCA-AGtg-ctg-------ggaaattt-tcataagGGCT--T--TTTAA-T
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_304221               136 33 -      7053 ---------------------TGAAATGCTGGTAAATT-TTATAGGAGTT--T--A--TA-C
i Chrysochloris_asiatica.ChrAsi_scaffold_304221         I 10 I 7
s Colobus_angolensis.KN985967.1                          10889473 45 +  10971483 TTA-AATGGACTC--AGTG-CGG-------AGAAATTT-GCATAAGggtg--c--tttgt-t
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147667401 45 + 156195979 TTA-AATGGACTC--AGTG-CGG-------AGAAATTT-GCATAAGGGTG--C--TTTGT-T
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            19384 45 +     23629 TTA-AGTGGACTC--AGTG-CGG-------AGAAATTT-GTATAAGGGTG--C--TTTGT-T
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60623834 46 +  78930452 tta-aatgGACTTA-AGTG-CTG-------GGAAATTT-TCATAagagta--t--tttat-t
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         4216 46 -      5782 TGA-AATGGACTTA-AGTG-CTG-------GGAAATTT-TGATAAGGGTG--T--TTTAT-T
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 283798 45 -    399297 TCA-AATGGACTT--GGTT-CTG-------GGAAGTTT-TCATAATGATG--T--TTTAT-T
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53036119 38 +  72327488 TCA-AATGGACTT--GGTG-CTG-------GGAAGTTC-TCATAATGATG------------
i Cricetulus_griseus.LT883672.1                         C 0 I 7
s Crocidura_indochinensis.CroInd_scaffold_27484              3729 44 -     22648 TTA-AATGCTCTTA-AGTG-CTG-------GGAAATTT-TTATAAG--TG--T--CTAAT-T
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            59203 47 -     70449 TTA-AATGGACTTA-AGTGGCTG-------GGAAATTT-TCATAACCATG--T--TTTAT-T
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  215941 45 -    956709 TTA-AATGTACTC--AGTG-CTG-------GGAAATTT-TCATGAGGTTG--T--TTTAT-T
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 36723 44 -     67205 TTA-AGTGGACCT--AGTG-CTG-------GGAAGTTT-GCACA-CAGTG--T--TTTAT-T
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                21708 45 +     26546 TTA-AATGGACTT--AATT-CTG-------GAAACTTT-TCAGAAGAGTG--T--TTCAT-T
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             62851 45 -    236241 TTA-AATAGACAT--AGCA-CTG-------GAAACTTT-TCAGAAGAGTG--T--TTTAT-T
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          186563 46 -   6883506 tta-aatggacTTA-AGTG-CTG-------GGAAATTT-TCATAAGGGCT--T--TTTAA-T
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16849982 45 +  31942871 TTA-AATGGACTT--AGTG-CTG-------GGAAATTT-TCATAAGAGTG--T--TTTAT-T
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80042321 46 -  96802777 TTA-AATGGACTTA-AGTG-CTG-------GGAAATTT-TCATAAGGGTG--C--TTTAT-T
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18702926 47 -  18957592 ttaaaatggaCTTA-AGTG-CTG-------GAAAATTT-TCGTAagggtg--t--tttat-t
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 328204 46 +    993696 TTA-AATAGACTTA-AGTG-CTG-------GGAAATTT-TCCTaagtgtg--t--tttat-t
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   8838 46 +    151128 TTA-AATAGACTTA-AGTG-CTG-------GGAAGTTT-TCCTAAGTGTG--T--TTTAT-T
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   160673 43 +    228994 TTA-AATGGAC----AGTG-CTG-------GGAAGCTT-TCGCAAGAGTG--T--TTTAT-T
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3661128 44 +   4240102 TGA-AGAGGACTT--AGTT-CTG-------TGAAGATT-TCACAag-ctg--t--tattt-t
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  3502 44 -     11986 TGA-AGAGGACTT--AGTT-CTG-------TGAAGATT-TCACAAG-CTG--T--TATTT-T
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                41416 45 -     73477 TTA-AATGGACTT--AGTG-CTT-------TAAACTTT-TCAGAAGAGTG--T--TTTAC-T
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           23000768 33 -  44670279 ---------------------TTCATTCCTGATTAGTG-TTACAAGCATT--T--A--AA-T
i Echinops_telfairi.JH980316.1                          I 10 I 1581
s Eidolon_helvum.KE772537.1                                 14926 46 +     24177 tta-aatggACTTA-AGTG-CTG-------GGAAGTTT-TCATAAgggtg--t--tttat-t
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1498250 46 +   1727528 TTA-AGTGGACTTA-AGTG-CTG-------GGAAATTT-TAATAAGGgtg--c--tttat-t
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7835122  9 +  15467074 TTA-AATAGA----------------------------------------------------
i Elephantulus_edwardii.JH947210.1                      I 119 C 0
s Ellobius_lutescens.LOEQ01003611.1                        244821 38 -    369425 TTA-AACGAACTT--GGTC-CTA-------GGAAGTTc-tcataatgata------------
i Ellobius_lutescens.LOEQ01003611.1                     C 0 I 7
s Ellobius_talpinus.LOJH01076532.1                           1165 38 +      9159 ATA-AATGAACTT--GGTA-CTG-------GGAAGTTc-tcataatgata------------
i Ellobius_talpinus.LOJH01076532.1                      C 0 I 7
s Enhydra_lutris.KZ291749.1                              85879129 46 +  99434291 TTA-AATGGACTTA-AGTG-CTG-------GGAAATTT-TCATAAGCGTA--T--TTTAT-T
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4710693 44 +   6522550 TCA-AATGGACTTA-AGTG-CTG-------GGAAATTT-Ttgtc--tgtg--t--tttat-t
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5858067 46 -   7175178 TTA-AATAGACTTA-AGTG-CTG-------GGAAATTT-TCATAAgggtg--t--tttat-t
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13356553 46 +  41866177 TTA-AATAGACTTA-AGTG-CTG-------GGAAATTT-TCATAAgggtg--t--tttat-t
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          18043 46 +     92910 TTA-AATAGACTTA-AGTG-CTG-------GGAAATTT-TCATAAgggtg--t--tttat-t
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11543220 45 +  16010500 TTA-AATGGACTT--AGTG-CTG-------GGAAATCT-TCATAAGcatg--t--tttat-t
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48781711 45 -  48907691 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-GTATAAGAGTG--C--TTTGT-T
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          320568 46 +    330699 TTA-AATGGACTTA-AGTG-TTG-------GGAAATTT-TCATAAGGGTG--C--TTTAT-T
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             67024 46 +     89355 TTA-AATGGACTTA-AGTG-TTG-------GGAAATTG-TCATAAGGGTG--T--TTTAT-T
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                             10104 45 +     13586 TTA-AATGGACTT--AGTG-CTG-------GGAAATTT-TCATAAGGGTG--T--TTTAT-T
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_1015201                              3363 45 -      4292 TTA-AATGGACTT--AGTG-CTG-------GGAAATTT-TCATAAGGGTG--T--TTTAT-T
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            16500 45 +     36558 TTA-AATGGACTT--AGTG-CTG-------GGAAATTT-TCATAAGGGTG--T--TTTAT-T
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            12822 45 +     60246 TTA-AATGGACTT--AGTG-CTG-------GGAAATTT-TCATAAGGGTG--T--TTTAT-T
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                16307 45 +    109717 TTA-AATGGACTT--AGTG-CTG-------GGAAATTT-TCATAAGGGTG--T--TTTAT-T
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 4290 45 -     19505 TTA-AATGGACTT--AGTG-CTG-------GGAAATTT-TCATAAGGGTG--T--TTTAT-T
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                20965 45 +     27497 TTA-AATGGACTT--AGTG-CTG-------GGAAATTT-TCATAAGGGTG--T--TTTAT-T
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           23421 45 +     26808 TTA-AATGGACTT--AGTG-CTG-------GGAAATTT-TCATAAGGGTG--T--TTTAT-T
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                38153 45 +     46535 TTA-AATGGACTT--AGTG-CTG-------GGAAATTT-TCATAAGGGTG--T--TTTAT-T
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              20894 45 -     29447 TTA-AATGGACTT--AGTG-CTG-------GGAAATTT-TCATAAGGGTG--T--TTTAT-T
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129900840 46 - 159252932 TTA-AATGGACTTA-AGGA-CTG-------GGAAATTT-TCATAAGTGTG--t--tttat-g
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129287817 46 - 158578461 TTA-AATGGACTTA-AGGA-CTG-------GGAAATTT-TCATAAGTGTG--t--tttat-g
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 29007 46 +     52776 TTA-AATGGACTTA-AGGA-CTG-------GGAAATTT-TCATAAGTGTG--T--TTTAT-G
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13897145 37 -  19261668 TTA-AATGGACCT--AGTG-CTG-------GGAAGTTT-TCAAAGgagt-------------
i Fukomys_damarensis.KN123630.1                         C 0 I 8
s Galago_moholi.ctg555                                     216147 45 -    847004 TTA-AATGGACTT--AGTG-CTG-------GGAAATTT-TCGGAAGGGTG--T--TTTAT-T
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           18508 45 -     43889 CCA-AATGGACTT--AGTG-CTG-------GGAAATTT-TCGGAAGGGTG--T--TTTAT-T
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          15650 45 +     27357 TTA-AATGGACTT--AGTG-CTG-------GGAAATTT-TCGTAAGGGTG--T--TTTAT-T
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               160424 45 +    324696 TTA-AATGGACTT--AGTG-CTG-------AGAAATTT-TTATAAGGGTA--T--TTTAT-T
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    188030 46 -    189561 TTA-AATGGTCTTA-AGTG-CTG-------GGAAATTT-TAGTAAgggta--t--tttat-t
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           17320 45 -     18683 CTA-AATGCAC--AAAGTG-CTG-------GGAAGTTT-CCATAAGGGTA--T--TTTAT-T
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                              10113 45 -     14630 TTA-AATGGACTC--AGCG-CTG-------AGAAATTT-TTATAAGGGTG--C--GTTAT-T
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119657213 45 - 195582420 TTA-AATGGACTC--AGCG-CTG-------AGAAATTT-TTATAAGGGTG--C--GTTAT-T
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   80640 45 +    118900 CTG-TAGACTT----AATG-TGA-------GGAAGTTT-TCATAAGTTTT--TTTTTAAT-T
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         6894 45 +     10286 TTA-AATGGACTT--AGTG-CTG-------GGAAATTT-TCATAAGGGTG--T--TTTAT-T
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             5375 45 -     11661 TTA-AATGGACTT--AGTG-CTG-------GGAAATTT-TCATAAGGGTG--T--TTTAT-T
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                            10699 45 +     56096 TTA-AATGGACTT--AGTG-CTG-------GGAAATTT-TCATAAGGGTG--T--TTTAT-T
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        33948 45 -     42470 TTA-AATGGACTT--AGTG-CTG-------GGAAATTT-TCATAAGGGTG--T--TTTAT-T
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        50574 45 -     54384 TTA-AATGGACTT--AGTG-CTG-------GGAAATTT-TCATAAGGGTG--T--TTTAT-T
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              24320 47 +     53719 TTA-AATGGACTTA-AGTGGCTG-------GGAAATTC-TCATAAGCATG--T--TTTAT-T
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                35160 46 -     91191 TTA-AATGGACTTA-AGTG-CTG-------GGAAATTT-TAATAAGGGTG--T--TTGAT-T
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2561491 19 +  31725842 TTA-AATGGACTT--ggta-ctg---------------------------------------
i Heterocephalus_glaber.JH602058.1                      C 0 I 7
s Heterohyrax_brucei.HetBruBak_scaffold_25354               63724 43 +     73687 TTA-AGTCAATTCA--GCA-CTG-------AGAAATTT-TCCTAACGGTT--T--G--CA-T
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              152373 46 +    277961 TTA-AATGGACTTA-AGTG-CTG-------GGAAATTT-TAATACGGGTG--T--TTTAT-T
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      285412 46 -    477199 TGA-AATGGATTTA-AGTG-TTG-------GGACATTT-TCATAAGGGTG--T--TTTAT-T
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959               3098 46 +     26078 TGA-AATGGATTTA-AGTG-CTG-------GGACATTT-TCATAAGGGTG--T--TTTAT-T
i Hipposideros_galeritus.HipGal_scaffold_52959          C 0 C 0
s Hoolock_leuconedys.ctg79                                     10038 45 -   7690867 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-TTATAAGGGTG--T--TTCAT-T
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 24758 45 -     67322 TTA-AATGGACTTA-AGTG-CTG-------GGAGAT-T-TCATAAGCATG--T--TTTAT-T
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           22057 44 -    119109 TTA-AATGGACTT--AGCG--TT-------TAAACTTT-TCAGAAGAGTG--T--TTTAT-C
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_1816750                             2609 45 +      3202 TTA-AATGGACTC--AGTG-CTG-------AGAACTTT-TTATAAGGGTG--C--TTCAT-T
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1136966                               618 45 +      9785 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-TTATAAGCGTG--C--TTCAT-T
i Hylobates_agilis.k141_1136966                         C 0 C 0
s Hylobates_klossii.k141_468230                              4098 45 +      5464 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-TTATAAGGGTG--C--TTCAT-T
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14629444 45 -  25970782 TTA-AACGAACTC--AGTG-CTG-------AGAAATTT-TTATAAGGGTG--C--TTCAT-T
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            1996 45 +      4161 TTA-AATGGACTC--AGTG-CTG-------AGAACTTT-TTATAAGGGTG--C--TTCAT-T
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                    10384 45 +     22540 TTA-AATGGACTT--TGTT-CTG-------GGAAGTTT-TCACAGGAGTA--T--TTTAT-T
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7131218 45 +  13083262 TTA-AATGTACTT--AGTG-CCC-------GGAAATTT-TTAGAAGCATG--T--TTTGT-T
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   2432 45 +      3484 TTA-AATGGACGT--AGTG-CTG-------GGAAATTT-TCATAAGGATG--T--TTTAT-T
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              14545 46 +     17520 TTA-AATGGACTTA-AGTG-CTG-------GGAAATTT-TCATAAGGGTG--T--TTTAC-T
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8580012 45 +  11848649 TTA-AATCACCAT--GTTA-CTG-------TCAAGTTT-GCATAGGggtg--t--tttat-t
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               29164 46 +     37189 TTA-AATAGACTTA-AGTG-CTG-------GGAAATTT-TCATAAGGGTG--T--TTTAT-T
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          54872 45 -    147782 TTT-AATGGACTC--AGTG-CTG-------AGAAATTT-TTATAAGGGTG--C--TTTAT-T
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    7243 46 +     26176 TCC-AATGGACTTA-AGTG-CTA-------GGAAATTT-TTGTCAGTGTG--T--TTTAT-T
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258412252 45 - 285822530 TTA-AATGGACTT--AGTG-CTG-------GGAAATTT-TCATAAGGGTG--T--TTTAT-T
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        29576 45 +     39228 TTA-AATGGACTT--AGTG-CTG-------GGAAATTT-TCATAAGGGTG--T--CTTAT-T
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            58940 45 +     63517 TTA-AATGGACTT--AGTG-CTG-------GGAAATTT-TCATAAGGGTG--T--CTTAT-T
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        37322 45 -     38897 TCA-AATGGACTT--AGTG-CTG-------GGAAATTT-TCATAAGCGTG--T--CTTAT-T
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      3366 45 -     13103 TTA-AATGGACTT--AGTG-CTG-------GGAAATTT-TCATAAGGGTG--T--CTTAT-T
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3093074 46 -   3498232 TTA-AATGGACTTA-AGTG-CTG-------GGAAATTT-TCATAAGcgtg--t--tttat-t
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    21856 37 +     22452 ATC-AATAGACTT--AATG-CTG-------GGAAATTT-TCATAAGGGC-------------
i Lepus_americanus.LepAme_scaffold_62849                C 0 I 7
s Lipotes_vexillifer.KE558548.1                            141486 46 +   3060487 TTA-AATGGACTTA-AGTG-CTG-------GGAAATTT-TCATAAGggtg--t--tttat-t
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19253332 45 +  19376315 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-GTATAAGGATG--C--TTTGT-T
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           16110 45 +     84689 TTA-AATGGACTG--AGTG-CCG-------GGAAATTT-TCATAAGGGTG--T--TTTAT-T
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3783845 45 +   6799190 TTA-AATGGACTG--AGTG-CCG-------GGAAATTT-TCATAAGGGTG--T--TTTAT-T
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20599643 44 -  62548349 TTA-AGTAGACTCA-AGTT-CTG-------GGAAATTT-TCATGAGGGTT--T--A--CA-T
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11096833 45 +  39895028 TTA-AATGGACTTA--GTG-CTG-------GGAAATTT-TCataagcata--t--tttat-t
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             25081 45 +     74745 TTA-AATGGACTC--AGGG-CTG-------AGAAATTT-GTATAAGGGTG--C--TTTGT-T
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12711544 45 +  12821369 TTA-AATGGACTC--AGGG-CTG-------AGAAATTT-GTATAAGGGTG--C--TTTGT-T
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                4117 45 -     26467 TTA-AATGGACTC--AGGG-CTG-------AGAAATTT-GTATAAGGGTG--C--TTTGT-T
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           51988 45 +     63263 TTA-AATGGACTC--AGGG-CTG-------AGAAATTT-GTAGAAGGGTG--C--TTTGT-T
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 4098 45 -     26361 TTA-AATGGACTC--AGGG-CTG-------AGAAATTT-GTATAAGGGTG--C--TTTGT-T
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_2667654                                 401 45 -      5626 TTA-AATGGACTC--AGGG-CTG-------AGAAATTT-GTATAAGGGTG--C--TTTGT-T
i Macaca_leonina.k141_2667654                           C 0 C 0
s Macaca_maura.k141_251854                                  50517 45 -     79256 TTA-AATGGACTC--AGGG-CTG-------AGAAATTT-GTATAAGGGTG--C--TTTGT-T
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196040615 45 + 196197964 TTA-AATGGACTC--AGGG-CTG-------AGAAATTT-GTATAAGggtg--c--tttgt-t
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11450785 45 +  11645122 TTA-AATGGACTC--AGGG-CTG-------AGAAATTT-GTATAAGggtg--c--tttgt-t
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   9471 45 -     46448 TTA-AATGGACTC--AGGG-CTG-------AGAAATTT-GTATAAGGGTG--C--TTTGT-T
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                7132 45 -     13212 TTA-AATGGACTC--AGGG-CTG-------AGAAATTT-GTATAAGGGTG--C--TTTGT-T
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 20814 45 -     55006 TTA-AATGGACTC--AGGG-CTG-------AGAAATTT-GTATAAGGGTG--C--TTTGT-T
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43846236 45 +  43892939 TTA-AATGGACTC--AGGG-CTG-------AGAAATTT-GTATAAGGGTG--C--TTTGT-T
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               22098 45 -     24607 TTA-AATGGACTC--AGGG-CTG-------AGAAATTT-GTATAAGGGTG--C--TTTGT-T
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               9468 45 -     27140 TTA-AATGGACTC--AGGG-CTG-------AGAAATTT-GTATAAGGGTG--C--TTTGT-T
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                703559 46 +    802869 TTA-AATGGACTTA-AGTG-CTG-------GGAAATTT-TCATAAGGGTG--T--TTTAT-T
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43442504 45 -  43563597 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-GTATAAGGATG--C--TTTGT-T
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4455307 45 -   4543643 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-GTATAAGGATG--C--TTTGT-T
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            153831 45 +    252755 TTA-AATGGAATTA-AGTG-CTT-------GC-AATTT-TCGTAAGggtg--t--tttat-t
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             41428 45 +     58827 TTA-AATGGAATTA-AGTG-CTT-------GC-AATTT-TCGTAAGggtg--t--tttat-t
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36879085 45 +  64221397 TTA-AATGTACTT--AGTG-CCC-------GGAAATTT-TTAGAAGCATG--T--TTTGT-T
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       67333 46 -    234502 TTA-AATGGACTT-CAGTG-CTG-------GGAAATTT-TTATAAGGGTG--T--TTTAT-T
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             8226 46 -     87323 TTA-AATGGACTTA-AGTG-CTG-------GGAAATTT-TCATAAGCGTG--T--TTTAT-T
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 3065 45 +    115071 TTC-AATGAACTT--GGTG-CTG-------GGAAGTTT-TCATAATGTCA--T--TTTAT-T
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1052660 38 -  26018355 TCA-AATGGACTT--AGTT-CTG-------GAAAGTTC-ACATAATGATA------------
i Mesocricetus_auratus.KB708139.1                       C 0 I 7
s Mesoplodon_bidens.MesBid_scaffold_96348                    4139 46 -     12939 TTA-AATGGACTTA-AGTG-CTG-------GGAAATTT-TCATAAGGGTG--T--TTTAT-T
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16515300 45 +  47401472 TTA-AATGGACTT--AATG-CTG-------GGAAATTT-TCATAAGGgtg--t--cttat-t
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  42335 33 -     48017 ---------------------TTAATTCCTGATAAATG-TTATAAGCATT--T--A--AA-T
i Microgale_talazaci.MicTal_scaffold_34660              I 10 I 1636
s Micronycteris_hirsuta.MicHir_scaffold_37978               26664 46 -     32043 TTA-AATGGACTTA-AGTG-CTG-------GGAAATTT-TCATAAGGGTG--C--TTTAT-T
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22825646 38 -  98408828 TTA-AATGAACTT--GGTA-CTG-------GGAAGTTC-tcataatgata------------
i Microtus_ochrogaster.CM001673.1                       C 0 I 7
s Miniopterus_natalensis.LDJU01000022.1                   8215014 46 +  10048721 TCA-AATGGACTTA-AGTG-CTG-------GGAAATTT-TTATGGGggtg--t--ttgat-t
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            39472 46 +     45743 TCA-AATGGACTTA-AGTG-CTG-------GGAAATTT-TTATGGGGGTG--T--TTGAT-T
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         7050 45 +     29742 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-GTATAAGGGTG--C--TTTGT-T
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        18570 46 -    104932 TTA-AATGGACTTA-AGTG-CTG-------GGAAATTT-TCATAAGCGTG--T--TTTAT-T
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     5985 45 -     12809 TTA-AATGGACTT--AATG-CTG-------GGAAATTT-TCATAAGGGTG--T--CTTAT-T
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 151914 46 +    154973 TTA-AATGGACTTA-AGTG-CTG-------GGAAATTT-TCATAAGGGTG--C--TTTAT-T
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                165179 46 +    265003 TTA-AATGGACTTA-AGTG-CTG-------GGAAATTT-TCATAAGGGTT--T--TTTAT-T
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  8709 46 -     19904 TTA-AATGGACTTA-AGTG-CTG-------GGAAATTT-TAATAAGGGTG--T--TTTAT-T
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  152049 47 -    168139 TTA-AATGGACTTA-AGTGGCTG-------AGAAATTT-TCATAAGCATG--T--TTTAT-T
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          26006 46 -    100666 TCA-AATGGACTTA-AATG-CTG-------GGAAATTT-TTGTCAGTGTG--T--TTTAT-T
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70772902 45 +  92629107 TTA-AATGAACTT--GCTG-CTG-------GGAAGTTC-TCATAATGGAG--T--CTTAT-T
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75494954 45 +  98207768 TTA-AATGAACTT--GATG-CTA-------GGAAGTTC-TCATAATGGAG--T--TTTAT-T
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67561706 45 +  89017189 TTA-AATAAATTA--GGTG-CTG-------GGAAGTTC-TCATAATGGAG--T--CTTAT-T
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74337677 45 +  97876770 TTA-AATGAACTT--GATG-CTG-------GGAAGTTC-TCATAATGGAG--T--CTTAT-T
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             15727 43 +     98495 GTA-AATAGAC----AGTA-TTG-------GGAAATTT-CTATAAGGGTA--T--TTGAT-T
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4430327 46 -  28371801 TTA-AATGGACTTA-AGTG-CTT-------GGAAATTT-TCATAAGCGTG--T--TTTAT-T
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     96459 44 -    117718 TTA-AGTGGACTT--AGTG-CTG-------GGAAGTTT-GCACA-GAGTG--T--TTTAT-T
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               973020 46 +   8389877 TCA-AATGGACTTA-AGTG-CTG-------AGAAATTT-TTGTcagtgta--t--tttat-t
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5024098 46 +   6462685 TCA-AATGGACTTA-AGTG-CTG-------AGACATTT-TTGTcagtgtg--t--tttat-t
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3470527 46 -   3747815 TCA-AATGGACTTA-AGTG-CTG-------AGAAATTT-TTGTcagtgtg--t--tttat-t
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        15756 44 +     66751 TCA-AATGGACTTA-AGTG-CTG-------AGAAATTT-TTGTCAGT--G--T--TTTAT-T
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             8510 46 -      8794 TTA-AATGGACTT-GAGTG-CCA-------GGAAATCT-TCATAAGGGCT--T--TTTAA-T
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            125384 45 +    362372 tta-aatggactc--agtg-ctg-------GGAAGTTC-TCATAATGATG--C--TTTAT-T
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                              11313 45 +     48152 TTA-AATGGACTC--AGTG-CGG-------AGAAATTT-GTATAAGGGTG--C--TTTGT-T
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4491961 46 -  14209539 TTA-AATGGACTTA-AGTG-CTG-------GGAAATTT-TCATAAGcgtg--t--tttat-t
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3956505 46 -   4490290 TTA-AATGGACTTA-AGTG-CTG-------GGAAATTT-TCATAAGggtg--t--tttat-t
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  52494 46 +     94413 TTA-AGTGGACTTA-AGTG-CTG-------GGAAATTT-TCATAAGGGTG--T--CTTAT-T
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_762468                            1115 45 -      2755 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-TTATAAGGGTG--C--TTCAG-T
i Nomascus_annamensis.k141_762468                       C 0 C 0
s Nomascus_concolor.k141_256540                              7725 45 -      8966 TTA-AACAGACTG--AGTG-CTG-------AGAAATTT-TTATAAGGGTG--C--TTCGT-T
i Nomascus_concolor.k141_256540                         C 0 C 0
s Nomascus_gabriellae.k141_1400361                           1666 45 -      2203 TTA-AAGGGACTC--AGTG-CTG-------AGAAATTT-TTATAAGGGTG--C--TTCAT-T
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_453                             6978 45 +     12787 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-TTATAAGGGTG--C--TTCAT-T
i Nomascus_siki_b.tarseq_453                        I 16 C 0
s Nomascus_siki_a.k141_421408                                  1580 45 +     16235 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-TTATAAGGGTG--C--TTCAT-T
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                39703 45 +   3668941 TTA-AATGGACTTA--GTG-CTG-------GGAAATTT-TCATaagcatg--t--tttat-t
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65572880 45 -  95554990 TTA-AATGGACTG--AGTG-CTG-------GGAAATTT-TCATAAGGGTG--T--TTTAT-T
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_6040852                             517 45 +      1868 TTA-AATGGACTG--AGTG-CTG-------GGAAATTT-TCATAAGGGTG--T--TTTAT-T
i Nycticebus_coucang.k141_6040852                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65681065 45 +  89412551 TTA-AATGGACTG--AGTG-CTG-------GGAAATTT-TCATAAGGGTG--T--TTTAT-T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            5000928 44 -  23139505 AA--AATTTACTT--AATT-CTG-------GGAAATTT-TCATTAgggtg--t--tttat-t
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3691798 44 +  10294119 TTA-AGTGGACTT--AGTG-CTG-------GGAATTTT-GCACA-GAGTG--T--TTTAT-T
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             686660 46 -   3126709 TTA-AATGGACTTA-AGTG-CTG-------GGAAATTT-TCATAAGcgtg--t--tttat-t
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1085684 46 +   1425656 TTA-AGTGGACTTA-AGTG-CTG-------GGAAGTTT-TAATAAGGgtg--c--tttat-t
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         43750 46 +     78940 TTA-AATGGTCTTA-AGTG-CTG-------GGAAATTT-TAGTAAcggta--t--tttat-t
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  131454 38 +    145789 TTA-AATGAACTT--GCTG-CTG-------GGAAATTC-TCATAATGATG------------
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 I 7
s Onychomys_torridus.OnyTor_scaffold_12578                  44371 44 +     62360 TTA-AATGGACTT--GGTA-CTG-------GGAAGTTC-TCATC-TAATG--T--TTTAT-T
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7230186 46 -   7562323 TTA-AATGGACTTA-AGTG-CTG-------GGAAATTT-TCATAAGggtg--t--tttat-t
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              65048 26 -     66828 ---------------------TG-------GGAAATTT-TTACAAGGGTT--T--G--TA-T
i Orycteropus_afer.OryAfe_flattened_line_13509          I 10 C 0
s Oryctolagus_cuniculus.CM000803.1                      141884872 37 + 163896628 ATC-AATAGACTT--AATG-CTG-------GGAAATTT-TCATAagggt-------------
i Oryctolagus_cuniculus.CM000803.1                      C 0 I 7
s Otocyon_megalotis.JAEUCK010005121.1                      316840 45 -    505867 TTA-AATGGACTTA--GTG-CTG-------GGAAATTT-TCATaagcatg--t--tttat-t
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        6008 45 -     53940 TTA-AATGGACTT--AGTG-CTG-------GGAAATTT-TCGTAAGGGTG--T--TTTAT-T
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18013974 45 -  38779656 TTA-AATGGACTT--AGTG-CTG-------GGAAATTT-TCGTAAgggtg--t--tttat-t
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134084942 46 - 275406953 TTA-AATGGACTTA-AGTG-CTG-------GGAAATTT-TAATAAGGGTG--T--TTGAT-T
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      86183 46 +    140051 TTA-AATGGACTTA-AGTG-CTG-------GGAAATTT-TAATAAGGGTG--T--TTTAT-T
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.KQ411703.1                                   19929 45 +     41252 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-TTATAAGggtg--c--tttat-t
i Pan_paniscus.KQ411703.1                               I 101 I 127
s Pan_troglodytes.NBAG03000771.1                           186351 45 +    210065 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-TTATAAggctg--c--tttat-t
i Pan_troglodytes.NBAG03000771.1                        I 16 I 762
s Panthera_onca.PanOnc_flattened_line_1615                  41606 45 +    295523 TTA-AATGGACTTA-AGGA-CTG-------GGAAATTT-TCGTAAGTGTG--T---TTAT-G
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3645422 45 +  18214204 TTA-AATGGACTTA-AGGA-CTG-------GGAAATTT-TCATAAGTGTG--t---ttat-g
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5035059 45 -   6340057 TTA-AATGGACTTA-AGGA-CTG-------GGAAATTT-TCATAAGTGTG--t---ttat-g
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1073815 46 -   1292953 TTA-AATGGACTTA-AGTG-CTG-------GGAAATTT-TAATAAGGGTG--T--TTTAT-T
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188161293 45 - 188283584 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-GTATAAGgatg--c--tttgt-t
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              4383 45 +     25005 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-GTATAAGGATG--C--TTTGT-T
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47518665 45 +  47705337 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-GTATAAGGATG--C--TTTGT-T
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 72656 45 -    104429 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-GTATAAGGATG--C--TTTGT-T
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   11188 45 +     14967 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-GTATAAGGATG--C--TTTGT-T
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 7053 45 -      7628 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-GTATAAGGATG--C--TTTGT-T
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    123082 46 -    135482 TTA-AATGGACTTA-AGTG-CTG-------GGAAATTT-TCATAAGCATG--T--TTTAT-T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          11672 45 -     23713 TTA-AATGGACTT--AGTT-CTG-------GGAAATTT-TCATAAGGGTG--T--TTTAT-T
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           12823 45 +     61070 TTA-AATGGACTT--AGTT-CTG-------GGAAATTT-TCATAAGGGTG--T--TTTAT-T
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       3131 44 +     49596 TTA-TGAGAACTC--AGTT-CTG-------GGAAGCTT-CCATAAG-CTG--T--TACGT-T
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615458.1                       2840219 34 -   3366660 ------------T--GGTG-CTG-------GGAAGTTC-TCAGCATAATG--T--TTTAT-C
i Peromyscus_maniculatus.KI615458.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    17832 19 -     36578 ATA-AATGGACTT--AGTG-TTG---------------------------------------
i Petromus_typicus.PetTyp_scaffold_33007                C 0 I 23
s Phocoena_phocoena.PhoPho_flattened_line_53071              4646 46 +      8220 TTA-AATGGACTTA-AGTG-CTG-------GGAAATTT-TCATAAGGGTG--T--TTTAT-T
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Piliocolobus_badius.k141_1987485                           4851 45 -      5908 TTA-AATAGACTC--AGTG-CGG-------AGAAATTT-GTATAAGGGTG--C--TTTGT-T
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       5470 45 -     17985 TTA-AATAGACTC--AGTG-CGG-------AGAAATTT-GTATAAGGGTG--C--TTTGT-T
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            4837 45 +      7694 TTA-AATAGACTC--AGTG-CGG-------AGAAATTT-GTATAAGGGTG--C--TTTGT-T
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26743320 45 +  26888534 TTA-AATAGACTC--AGTG-CGG-------AGAAATTT-GTATAAGggtg--c--tttgt-t
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306           101257 46 +    112873 TCA-AATGGACTTA-AGTG-CTG-------GGAAGTTT-TTGTCAGTGTG--T--TTTAT-T
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990          11128 46 +     21690 TTA-AATGGACTTA-AGTG-TTG-------GGAAATTT-TCATAAGGGTG--T--TTTAT-T
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       26963 45 +     44506 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-TTATAAGCGTG--C--TTTAT-T
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        27176 45 +     67491 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-TTATAAGCGTG--C--TTTAT-T
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      17415 45 -     98129 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-TTATAAGCGTG--C--TTTAT-T
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     27016 45 +    147771 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-TTATAAGCGTG--C--TTTAT-T
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         3651 45 -     43940 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-TTATAAGCGTG--C--TTTAT-T
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          7734 45 -     55515 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-TTATAAGCGTG--C--TTTAT-T
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         27088 45 +    152463 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-TTATAAGCATG--C--TTTAT-T
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       4896 45 -    119457 GTA-AATGGACTC--AGTG-CTG-------AGAAATTT-TTATAAGCATG--C--TTTAT-T
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         16810 45 +    134592 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-TTATAAGCGTG--C--TTTAT-T
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          27398 45 -     75465 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-TTATAAGCATG--C--TTTAT-T
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              192023 45 -    373494 TTA-AATGGACTC--AGTG-TTG-------AGAAATTT-TTATAAGggtg--c--tttat-t
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19812670 45 +  19899266 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-TTATAAGGGTG--C--TTTAT-T
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               8595 45 -     15069 TTA-AATGGACTC--AGTG-CGG-------AGAAATTT-GTATAAGGGTG--C--TTTGT-T
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              8710 45 +     14865 TTA-AATGGACTC--AGTG-TGG-------AGAAATTT-GTATAAGGGTG--C--TTTGT-T
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                4828 43 -      9567 TTA-AGTCAGTTCA--GCA-CTG-------AGAAATTT-TCCTAACGGTT--T--G--CA-T
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6853624 45 +  12164890 TTA-AATGGACTT--AGTG-CTG-------GGAAATTT-TCATAAGggtg--t--tttat-t
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     22432 45 -     30946 NNN-NNNNNNNNN--NNNN-NNN-------NNNNNNNN-NNNNNNNNNNN--N--NNNNN-N
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         8728 45 +     11805 TTA-AATGGACTT--AGTG-CTG-------GGAAATTT-TCATAAGGGTG--T--TTTAT-T
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           48062 45 +     52369 TTA-AATGGACTT--AGTG-CTG-------GGAAATTT-TCATAAGAGTG--T--TTTAT-T
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         40449 45 -     44753 TTA-AATGGACTT--AGTG-CTG-------GGAAATTT-TCATAAGGGTG--T--TTTAT-T
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            22372 45 +     27322 TTA-AATGGACTT--AGTG-CTG-------GGAAATTT-TCATAAGGGTG--T--TTTAT-T
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       22017 45 -     53241 TTA-AATGGACTT--AGTG-CTG-------GGAAATTT-TCATAAGGGTG--T--TTTAT-T
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         44280 45 -     48185 TTA-AATGGACTT--AGTG-CTG-------GGAAATTT-TCATAAGGGTG--T--TTTAT-T
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           40041 45 +     77221 TTC-AATGAACTT--GGTG-CTG-------GGAAGTTT-TCataatgtca--t--tttat-t
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            7832 46 -     27784 tta-aatGGACCTA-AGTG-CTG-------GGAAATTt-tcataaacatg--t--tttat-t
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        251973 46 -    344369 TTA-AATGGACTTA-AGTG-CTG-------GGAAATTT-TCATAAGCGTG--T--TTTAT-T
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13248637 46 -  17261082 tta-aatggACTTA-AGTG-CTG-------GGAAGTTT-TCATAAgggtg--t--tttat-t
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             606587 46 -   3946241 tta-aatggACTTA-AGTG-CTG-------GGAAGTTT-TCATAAgggtg--t--tttat-t
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131541546 46 - 161321710 TTA-AAAGGACTTA-AGGA-CTG-------GGAAATTT-TCATAAGTGTG--t--tttat-g
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             32701 45 +     56732 TTA-AATGGACTC--AGTG-CGG-------AGAAATTT-GTATAAGGGTG--C--TTTGT-T
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6809198 45 +   6970761 TTA-AATGGACTC--AGTG-CGG-------AGAAATTT-GTATAAGGGTG--C--TTTGT-T
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             8587 45 +     18040 TTA-AATGGACTC--AGTG-CGG-------AGAAATTT-GTATAAGGGTG--C--TTTGT-T
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                22529 46 +     68503 TTA-AGTGGACTTA-AGTG-CTG-------GGAAGTTT-TAATAAGGGTG--C--TTTAT-T
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13918648 45 +  90463843 CTA-AATGAACTT--GGTG-CTG-------GGAAGTTC-TCATAACGAAG--T--CGTAT-T
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1794464 46 +   2252614 TGA-AATGGACTTA-AGTG-CTG-------GGAAATTT-TCATAAGggtg--t--tttat-t
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                            2966 45 -     17045 TTA-AATGGACTC--AGTG-CGG-------AGAAATTT-GTATAAGGGTG--C--TTTGT-T
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206380453 45 - 206558726 TTA-AATGGACTC--AGTG-CGG-------AGAAATTT-GTATAAGggtg--c--tttgt-t
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44859356 45 -  45163003 TTA-AATGGACTC--AGTG-CGG-------AGAAATTT-GTATAAGGGTG--C--TTTGT-T
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                21982 46 +    109198 TTA-AATGGACTTA-AGTG-CTG-------GGAAGTTT-TCATAAGGGTG--T--TTTAT-T
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                      3212 47 -      4338 TTA-AATGGATTTA-AGTG-CTG-------GGAAATTT-TAATAAGGGTG--T--TTTATGT
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15677417 45 -  43202129 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-TTATAAGGTTG--C--TTTAT-T
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        9331 45 +     34089 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-TTATAAGGTTG--C--TTTAT-T
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              9270 45 -     60842 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-TTATAAGGTTG--C--TTTAT-T
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              9364 45 +     67014 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-TTATAAGGTTG--C--TTTAT-T
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              9341 45 +     60816 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-TTATAAGGTTG--C--TTTAT-T
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 9278 45 -     76454 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-TTATAAGGTTG--C--TTTAT-T
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17346043 45 -  30362882 TTA-AATTGACTT--AGTG-CTG-------AGAAATTT-TTATAAGGGTG--C--TTTAT-T
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         25364 45 -     62485 TTA-AATTGACTT--AGTG-CTG-------AGAAATTT-TTATAAGGGTG--C--TTTAT-T
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   41251 46 -    114521 TTG-AATGAACTTA-AGTG-CTA-------GGAAATTT-TCATAAGGGTG--T--TTTAT-T
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        6202 45 +     15331 TTA-AATGGACTC--AGTG-CGG-------AGAAATTT-GTATAAGGGTG--C--TTTGT-T
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      11577 45 +     20762 TTA-AATGGACTC--AGTG-CGG-------AGAAATTT-GTATAAGGGTG--C--TTTGT-T
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         121581 45 +    130994 TTA-AATGGACTC--AGTG-CGG-------AGAAATTT-GTATAAGGGTG--C--TTTGT-T
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           40361 45 +     46263 TTA-AATGGACTC--AGTG-CGG-------AGAAATTT-GTATAAGGGTG--C--TTTGT-T
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     33506 45 +     42640 TTA-AATGGACTC--AGTG-CGG-------AGAAATTT-GTATAAGGGTG--C--TTTGT-T
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        16528 45 +     30600 TTA-AATGGACTC--AGTG-CGG-------AGAAATTT-GTATAAGGGTG--C--TTTGT-T
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  106546 47 -    120886 TTA-AATGGACTT--AGTG-CTG-------GGAAGGTC-TGATAATGATGTGT--TGTAT-T
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 I 27
s Solenodon_paradoxus.SolPar_flattened_line_1012            25918 46 +    739146 TTA-AATGGACTTA-AGTG-CTG-------GGAAATTT-TCACAAGGGTG--T--TTTAT-T
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17776244 46 -  27805282 TTA-GATGGACATA-AGTG-CTG-------GGAAATTT-TTATAAGggtg--t--tttat-t
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2244919 45 +   2842873 TTA-AATGTACTT--AGTG-CCC-------GGAAATTT-TTAGAAGcatg--t--tttgt-t
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             240750 46 -    276980 TTA-AATGGACTTA-AGTG-CTG-------GGAAATTT-TCATAAGTGTG--T--TTTAT-T
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            34950 47 +     62062 TTA-AATGGACTTA-AGTGACTG-------GGAAATTT-TCATAAGCATG--T--TTTAT-T
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189276950 44 + 218635234 TTA-AATGGACTTA-AGTG-CTG-------GGAAATTT-TAATGA--GTG--C--TTTAT-T
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        19703 45 -  13920577 TTA-AATTTTCTC--ACTG-CTG-------AGAAATTT-TTATAAGGGTG--C--TTCAT-T
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                4091 46 +     20549 TTA-AATGGACTTA-AGTG-CTG-------GGAAAGTT-TTATAACAGTG--A--TTTAT-T
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               18184 46 +     45698 TTA-AATGGACTC-GAGTG-CCA-------GGAAATCT-TCATAAGGGCT--T--TTTAA-T
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      812538 46 +   1148477 TTA-AATAGACTTA-AGTG-CTG-------GGAAATTT-TCATAAGTGTG--T--TTTAT-T
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  63180 46 +     99546 TTA-AATAGACTTA-AGTG-CTG-------GGAAATTT-TCATAAGTGTG--T--TTTAT-T
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194012826 45 - 194193292 TTA-AATGGACTC--AGTG-CTG-------AGAAATTT-GTATAAGgatg--c--tttgt-t
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                  1368 46 -      3104 TTA-AATGGACTC-CAGTG-CTG-------GGAAATTT-TCATAAGGGCT--T--TTTAA-T
i Tolypeutes_matacus.TolMat_scaffold_475685             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  139839 45 -    259118 TTA--ATGGACTTA-AGTG-CTA-------GGGAATTT-TCATAAGGGTG--T--TTTAT-T
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        29849 45 +     38948 TTA-AATGGACTC--AGTG-TGG-------AGAAATTT-GTATAAGGGTG--C--TTTGT-T
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   23409 45 -     32910 TTA-AATGGACTC--AGTG-CGG-------AGAAATTT-GTATAAGGGTG--C--TTTGT-T
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      5310 45 -     12939 TTA-AATGGACTC--AGTG-TGG-------AGAAATTT-GTATAAGGGTG--C--TTTGT-T
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       4738 45 -     14244 TTA-AATGGACTC--AGTG-CGG-------AGAAATTT-GTATAAGGGTG--C--TTTGT-T
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           46131 45 -     54611 TTA-AATGGACTC--AGTG-CAG-------AGAAATTT-GTATAAAAGTG--C--TTTGT-T
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        3932 45 -     11566 TTA-AATGGACTC--AGTG-CGG-------AGAAATTT-GTATAAGGGTG--C--TTTGT-T
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     6116 45 -     15592 TTA-AATGGACTC--AGTG-CGG-------AGAAATTT-GTATAAGGGTG--C--TTTGT-T
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          4768 45 +     14371 TTA-AATGGACTC--AGTG-CGG-------AGAAATTT-GTATAAGGGTG--C--TTTGT-T
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   3054 45 +     12481 TTA-AATGGACTC--AGTG-CGG-------AGAAATTT-GTATAAGGGTG--C--TTTGT-T
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        3035 45 -     24393 TTA-AATGGACTC--AGTG-CGG-------AGAAATTT-GTATAAGGGTG--C--TTTGT-T
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       8179 45 -     28054 TTA-AATGGACTC--AGTG-TGG-------AGAAATTT-GTATAAGGGTG--C--TTTGT-T
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44662963 45 -  44834318 TTA-AATGGACTC--AGTG-CGG-------AGAAATTT-GTATAAGGGTG--C--TTTGT-T
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       5275 45 +     13828 TTA-AATGGACTC--AGTG-CAG-------AGAAATTT-GTATAAAAGTG--C--TTTGT-T
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                  10697 46 +     90398 TTA-AAAGGATTT-CAGTG-CTG-------CGAAATTT-TAATAAGGGTG--T--TTTAT-T
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16090714 44 +  31416278 TTA-AGTAGACTCA-AGTG-CTG-------GGAAACTT-TCATAAGGATT--T--G--CA-T
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2801969 44 -   3938065 TCA-AATGAACTC--AGTG-CTG-------GGAAATTT-TTATAAG-gtg--t--tttgt-t
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                   10797 44 +     13056 TTA-AATGAACTC--AGTG-CTG-------GGAAATTT-TTATAAG-GTG--T--TTTGT-T
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69318916 46 -  96451834 TTA-AATGCACTTA-AGTG-CTG-------GGAAATTT-TCATAAGggtg--t--tttat-t
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                    1653 46 +    136657 TTA-AATGGACTTA-AGTG-CTG-------GGAAATTT-TCATAAGGGTG--T--TTTAT-T
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 C 0
s Ursus_maritimus.KK498671.1                              6522398 46 +  28682327 TTA-AATGGACTTA-AGTG-CTG-------GGAAATTT-TCATGagagtg--t--tttat-t
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                 10293 45 -     20643 TTA-AATGGACTT--AGTG-CTG-------GGAAATTT-TCATAAGGGTG--T--TTTAT-T
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             29828 45 -     33872 TTA-AATGGACTT--AGTG-CTG-------GGAAATTT-TCATAAGGGTG--T--TTTAT-T
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1529943 46 -   2331223 TTA-AATGGATGTA-AGTG-CTG-------GGAAATTT-TAATAAgggag--t--tttat-t
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                146067 45 -    281493 TTA-AATGGACTTA--GTG-CTG-------GGAAATTT-TCATAAGCATG--T--TTTAT-T
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       132415 45 -    134049 TTA-AATGGACTT--ATAG-CTT-------GGAAGTTT-TTAGAAGTGTG--T--TTTAT-T
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        221521 46 -    227762 TTA-AATGGACTTA-AGTG-CTG-------GGAAATTT-TCATAAGCGTG--T--TTTAT-T
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_202118                     2083 45 -      3360 TTA-AATCAACTT--GCTG-CTG-------ACAAGTTT-GCACAGGGGTG--C--TTTAT-T
i Zapus_hudsonius.ZapHud_scaffold_202118                C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            3501 46 -     13665 TTA-AATGGACTTA-AGTG-CTG-------GGAAATTT-TCATAAGGGTG--T--TTTAT-T
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Hylobates_pileatus_a.tarseq_592                             37267 2881 -     60944 I
e Tarsius_wallacei.k141_48636                               64696  0 +     65473 C
e Tarsius_lariang.k141_609102                               31387  0 +     42269 C
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Cephalopachus_bancanus.k141_702587                        12545  0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530  0 +    345090 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               18461 28 +    209709 TTCTT-CTATGGTAAATCTAGG----------AACCAAT
s Acinonyx_jubatus.LLWD01000356.1                         2041237 26 +   3721120 t-ctt-ctctgg-aaatcTGGG----------AACCAAT
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    118934 27 -    189883 T-ATT-CTATGGTAAATCTGAG----------AACCAAT
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10665177 26 +  23371972 t-ctt-ctctgg-aaaTCTGGG----------AACCAAT
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7102125 26 -  16596857 t-ctt-ctctgg-aaaTCTGGG----------AACCAAT
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_141108                   2310 22 -      7259 T-CTT-CAATG-TGA----GGA----------AACCAAT
i Allactaga_bullata.AllBul_scaffold_141108              C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   6348 28 -     60446 TTCTT-CTATGGCAAATCTGGG----------AACCAAT
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         7062 28 -     29318 TTCTT-CTATGGTAAATCTGGG----------AACCAAT
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         6000 28 +     38766 TTCTT-CTATGGTAAATCTGGG----------AACCAAT
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          6958 28 -     80423 TTCTT-CTATGGTAAATCTGGG----------AACCAAT
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              1911 27 +     19852 T-CTT-CTATAGTAAATCCAGG----------AACCAAT
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                4134 27 -     12443 T-CTT-CTATAGTAAATCCAGG----------AACCAAT
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                             1454 27 +      5070 T-CTT-CTATAGTAAATCCAGG----------AACCAAT
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                 1201 27 -      1641 T-CTT-CTATAGTAAATCCAGG----------AACCAAT
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          3940 27 -     24210 T-CTT-CTATAGTAAATCCAGG----------AACCAAT
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_494922                              444 27 -      8325 T-CTT-CTATAGTAAATCCAGG----------AACCAAT
i Alouatta_nigerrima.k141_494922                        C 0 C 0
s Alouatta_palliata.k141_405616                              6358 27 +     16794 T-CTT-CTATAGTAAATCCAGG----------AACCAAT
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_347198                              387 27 +      9111 T-CTT-CTATAGTAAATCCAGG----------AACCAAT
i Alouatta_puruensis.k141_347198                        C 0 C 0
s Alouatta_seniculus.k141_790278                             5635 27 -      9835 T-CTT-CTATAGTAAATCCAGG----------AACCAAT
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3528382 26 +   4113121 --CTT-CTATGGTAAATCTAAG----------AACCAAT
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      394469 27 -    631301 T-CTT-CTGTGGGAAATCTGGG----------AACCAAC
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             5544 27 +     55446 T-CTT-CTATGGTAAATCTAAG----------AACCAAT
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 67244 27 +     78111 T-CTT-CTATAGTAAATCCAGG----------AACCAAT
i Aotus_azarae.k141_3170768                             C 0 I 6
s Aotus_griseimembra.k141_3275623                           10188 27 +     22701 T-CTT-CTATAGTAAATCCAGG----------AACCAAT
i Aotus_griseimembra.k141_3275623                       C 0 I 6
s Aotus_nancymaae.KZ196176.1                              5754155 27 +   9889416 T-CTT-CTATAGTAAATCCAGg----------aaccaat
i Aotus_nancymaae.KZ196176.1                            C 0 I 6
s Aotus_trivirgatus.k141_1740727                            10732 27 -    104377 T-CTT-CTATAGTAAATCCAGG----------AACCAAT
i Aotus_trivirgatus.k141_1740727                        C 0 I 6
s Aotus_vociferans.k141_718647                              10761 27 +     23246 T-CTT-CTATAGTAAATCCAGG----------AACCAAT
i Aotus_vociferans.k141_718647                          C 0 I 6
s Aplodontia_rufa.AprRuf_scaffold_101456                     3413 27 +     11424 T-CTT-CTATACTGAATCTGAG----------AACCCAA
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        7335 27 +      9265 T-CTT-CTATACTAAAGCTGGG----------AACCAAT
i Arctocebus_calabarensis.k141_587554                   I 4 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                12761 27 -     29036 T-CTT-CTGTGGGAAATCTGGG----------AACCAAC
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9544045 27 +  39197703 T-CTT-CTATAGTAAATCCAGG----------AACCAAT
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             65319 27 +     85812 T-CTT-CTATAGTAAATCCAGG----------AACCAAT
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                16332 27 +     89302 T-CTT-CTATAGTAAATCCAGG----------AACCAAT
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             20833 27 -     58268 T-CTT-CTATAGTAAATCCAGG----------AACCAAT
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             68827 27 +    119057 T-CTT-CTATAGTAAATCCAGG----------AACCAAT
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              10796 27 -     25888 T-CTT-CTATAGTAAATCCAGG----------AACCAAT
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                11865 27 -     16375 T-CTT-CTATGGTAAATCTGGG----------AACCAAT
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               5481 27 +      6337 T-CTT-CTATGGTAAATCTGGG----------AACCAAT
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26385771 27 +  51448160 t-ctt-ctgtggtAAATCTGAG----------AACCAAT
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                       10944 27 -     13118 t-ctt-ctgtggTAAATCTGAG----------AACCAAT
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   50354 26 -     72089 --CTT-CTATGGTAAGTCTAAG----------AACCAAT
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   305301 27 -   6870073 t-ctt-ctatggtAAATCTAAG----------AACCAAT
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22959407 27 + 161108492 t-ctt-ctatggtAAATCTAAG----------AACCAAT
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     421586 27 +    998990 t-ctt-ctatggtAAATCTAAG----------AACCAAT
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22668059 27 + 158972876 t-ctt-ctatggtAAATCTAAG----------AACCAAT
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               676897 27 +   1914593 t-ctt-ctatggtAAATCTAAG----------AACCAAT
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               118665 27 -    171031 T-CTT-CTATAGTAAATCTAGG----------AACCAAT
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 17685 27 +    125063 T-CTT-CTATAGTAAATCTAGG----------AACCAAT
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                19732 27 -    216513 T-CTT-CTATAGTAAATCTAGG----------AACCAAT
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       12275 27 -    134917 T-CTT-CTATAGTAAATCTAGG----------AACCAAT
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3224881 27 -   8989139 t-ctt-ctatggTAAATCTGAG----------AACAAAT
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           402581 27 -  15254737 t-ctt-ctatggTAAATCTGAG----------AACAAAT
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2978319 27 +   6889770 t-ctt-ctatggTAAATCTGAG----------AACAAAT
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11528028 26 +  39901454 T-CTT-CTCTGA-AAATCTGGG----------AACCAAT
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   23002 26 +     87036 T-CTT-CTCTGA-AAATCTGGG----------AACCAAT
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11274925 26 -  35597290 t-ctt-ctctga-aaatCTGGG----------AACCAAT
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11097422 26 +  39895921 t-ctt-ctctga-aaatCTGGG----------AACCAAT
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16464207 26 -  44759192 t-ctt-ctctga-aaatCTGGG----------AACCAAT
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21335815 26 + 157394656 --CTT-CTATGGTAAATCTAAG----------AACCAAT
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135714168 26 - 157403528 --CTT-CTATGGTAAATCTAAG----------AACCAAT
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_780116                   400 27 +      1571 T-CTT-CTATGGTAAATCTGGG----------AACCAAT
i Capromys_pilorides.CapPil_scaffold_780116             C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               63755 27 +     67245 T-CTT-CTGTGGGAAATCTGGG----------AACCAAC
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_1326                      875 27 -    202837 T-CTT-ATATGGTATATCTGGG----------AACCAAT
i Castor_canadensis.CasCan_scaffold_1326                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   164624 27 -    276539 T-CTT-CTATGGTAAATCTGAG----------AACCAAT
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15790559 27 -  24422027 N-NNN-NNNNNNNNNNNNNNNN----------NNNNNNN
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15802498 27 -  24440124 t-ctt-ctgtgataaatctggg----------aacaaat
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       180670 27 +    436027 T-CTT-CTGTGATAAATCTGGG----------AACAAAT
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18896400 27 -  29618158 T-CTT-CTATAGTAAATCCAGG----------AACCAAT
i Cebus_albifrons.Contig22                              C 0 I 5
s Cebus_olivaceus.k141_93739                                13050 27 -     26817 T-CTT-CTATAGTAAATCCAGG----------AACCAAT
i Cebus_olivaceus.k141_93739                            C 0 I 5
s Cebus_unicolor.k141_239009                                17294 27 +     25043 T-CTT-CTATAGTAAATCGAGG----------AACCAAT
i Cebus_unicolor.k141_239009                            C 0 I 5
s Ceratotherium_simum.JH767818.1                          4369851 27 +   7569818 t-ctt-ctatggTAAATTGGGG----------AACCAAT
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_171732            8 27 +      8380 T-CTT-CTATGGTAAATTGGGG----------AACCAAT
i Ceratotherium_simum_cottoni.CerCot_scaffold_171732    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6560288 28 +   6739814 ttctt-ctatggtAAATCTGGG----------AACCAAT
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      31765 28 +     60454 TTCTT-CTATGGTAAATCTGGG----------AACCAAT
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          6969 28 -     21101 TTCTT-CTATGGTAAATCTGGG----------AACCAAT
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         64279 28 -    107033 TTCTT-CTATGGTAAATCTGGG----------AACCAAT
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        7139 28 -     17608 TTCTT-CTATGGCAAATCTGGG----------AACCAAT
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          4307 28 +     45019 TTCTT-CTATGGCAAATCTGGG----------AACCAAT
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           4583 28 +     15177 TTCTT-CTATGGTAAATCTGGG----------AACCAAT
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          7189 28 +     16677 TTCTT-CTATGGCAAATCTGGG----------AACCAAT
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           29385 28 +     35983 TTCTT-CTATGGCAAATCTGGG----------AACCAAT
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11995910 28 +  12117833 TTCTT-CTATGGCAAATCTGGG----------AACCAAT
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46482892 28 +  46592721 TTCTT-CTATGGCAAATCTGGG----------AACCAAT
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                       1003 28 -     27215 TTCTT-CTATGGTAAATCTGGG----------AACCAAT
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       7203 28 +     35577 TTCTT-CTATGGCAAATCTGGG----------AACCAAT
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        6997 28 -     25661 TTCTT-CTATGGCAAATCTGGG----------AACCAAT
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        7169 28 -     17744 TTCTT-CTATGGTAAATCTGGG----------AACCAAT
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        26538 28 +     37128 TTCTT-CTATGGCAAATCTGGG----------AACCAAT
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           5565 27 -      6963 T-CTT-CTAGGGTAAATCTGGG----------AAACAAT
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           64081 27 -     68416 T-CTT-CTATGGTAAATCTGGG----------AACCAAT
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_854352                             383 27 +     27737 T-CTT-CTATGGTAAATCTGGG----------AACCAAT
i Cheirogaleus_medius.k141_854352                       C 0 C 0
s Cheracebus_lucifer.k141_619653                            10356 27 -     18223 T-CTT-CTACAGTAAATCTAGG----------AACAAAT
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              2097 27 +    188999 T-CTT-CTACAGTAAATCTAGG----------AACAAAT
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           46396 27 +     57117 T-CTT-CTATAGTAAATCTAGG----------AACCAAT
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          51076 27 +     54541 T-CTT-CTACAGTAAATCTAGG----------AACAAAT
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15965248 27 +  43084221 t-cct-ctatcGTAAATCTGGG----------AACCAAT
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         75877 27 +    196370 T-TTT-CTATAGTAAATCTAGG----------AACCAAT
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          20058 27 +     40510 T-TTT-CTATAGTAAATCTAGG----------AACCAAT
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15144723 28 -  15256731 TTCTT-CTATGGTAAATCTGGG----------AACCAAT
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      39187 28 -     53260 TTCTT-CTATGGTAAATCTGGG----------AACCAAT
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101149746 28 + 101219884 ttctt-ctatggtaAATCTGGG----------AACCAAT
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                19587 27 -     21363 T-CTT-CTCTGGTAAATCAGGG----------AAACAAT
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           764891 27 +    964067 T-CTT-CTCTGGTAAATCAGGG----------AAACAAT
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_304221               176 25 -      7053 ---TT-CTATTATAGATCTAGA----------AATCAAT
i Chrysochloris_asiatica.ChrAsi_scaffold_304221         I 7 C 0
s Colobus_angolensis.KN985967.1                          10889518 28 +  10971483 ttctt-ctatggtAAATCTGGG----------AACCAAT
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147667446 28 + 156195979 TTCTT-CTATGGTAAATCTGGG----------AACCAAT
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            19429 28 +     23629 TTCTT-CTATGGTAAATCTGGG----------AACCAAT
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60623880 27 +  78930452 t-ctt-gtatggTAAATCTGGG----------AACCAAT
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         4262 27 -      5782 T-CTT-CTGCGGTAAATCTGGG----------AACCAAT
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 283843 27 -    399297 T-ATT-CTATCATAAATCTAGG----------AACCAAT
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53036164 27 +  72327488 T-CTT-CTATGGTAAATCTGGG----------AACCAAT
i Cricetulus_griseus.LT883672.1                         I 7 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              3773 27 -     22648 T-CTT-TTATGGTAAATCTGGG----------AACCAAT
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            59250 26 -     70449 T-CTT-CTCTGG-AAATCTGGG----------AACCAAT
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  215986 27 -    956709 T-TTT-CTATGGTAAATCTGGG----------AAACAAT
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 36767 27 -     67205 T-CTT-CTATGGTAAATCTAGG----------AACCAAT
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                21753 27 +     26546 T-CTT-CTATGGTAAATCTGGG----------AACAAAT
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             62896 27 -    236241 T-TTT-GCATGGTAAATCTGGG----------AACAAAT
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          186609 27 -   6883506 T-CTT-CTATGGTAAATCTGGg----------aaacaat
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16850027 27 +  31942871 T-CTT-CTATGGTAAATCTGGG----------AACCAAT
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80042367 27 -  96802777 T-CTT-CTATGGTAAATCTGAG----------AACCAAT
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18702973 27 -  18957592 t-ctt-ctgtgggAAATCTGGG----------AACCAAT
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 328250 27 +    993696 t-ctt-ctatggTAAATTGGGG----------AACCAAT
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   8884 27 +    151128 T-CTT-CTATGGTAAATTGGGG----------AACCAAT
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   160716 27 +    228994 C-CCT-TTATGGTAAATCTGGG----------AACCAAT
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3661172 27 +   4240102 t-ctt-ctatggtATATCTGGG----------AACTAAT
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  3546 27 -     11986 T-CTT-CTATGGTATATCTGGG----------AACTAAT
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                41461 27 -     73477 T-ATT-CTATGATAAATCTGAG----------AACAAAC
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           23002382 28 -  44670279 T-CTTGCTGTGGTAAATCCGGG----------AAACAAT
i Echinops_telfairi.JH980316.1                          I 1581 C 0
s Eidolon_helvum.KE772537.1                                 14972 27 +     24177 t-ctt-cagtggTAAATCTGGG----------Aaccaat
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1498296 27 +   1727528 t-ctt-ctatggTAAATCTAAG----------AACCAAC
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7835131 12 +  15467074 ----------------TTTGAA----------TGCTAA-
i Elephantulus_edwardii.JH947210.1                      C 0 I 34
s Ellobius_lutescens.LOEQ01003611.1                        244866 24 -    369425 t-ct----gtggcaAATCTGAG----------AACCAAT
i Ellobius_lutescens.LOEQ01003611.1                     I 7 C 0
s Ellobius_talpinus.LOJH01076532.1                           1210 24 +      9159 t-ct----gcGGCAAATCTGAG----------AACCAAT
i Ellobius_talpinus.LOJH01076532.1                      I 7 C 0
s Enhydra_lutris.KZ291749.1                              85879175 26 +  99434291 T-CGT-CTCTGG-AAATCTGGG----------ATCCAAT
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4710737 27 +   6522550 t-ctt-ctatggTAAATCTGGG----------AATGAAT
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5858113 27 -   7175178 t-ctt-ctttggtaaatTGGGG----------AACCAAT
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13356599 27 +  41866177 t-ctt-ctttggtaaatTGGGG----------AACCAAT
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          18089 27 +     92910 t-ctt-ctttggtaaatTGGGG----------AACCAAT
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11543265 27 +  16010500 t-ctt-ctatGGTAAATCTGAG----------AACAAAT
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48781756 28 -  48907691 TTCTT-CTATGGTAAATCTGGG----------AACCAAT
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          320614 27 +    330699 T-CTT-CTGTGGTAAATCTGAG----------AACCAAT
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             67070 27 +     89355 T-CTT-CTGTGGTAAATCTGAG----------AACCAAT
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                             10149 27 +     13586 T-CTT-CTATGGTAAATCTGGG----------AACCAAT
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_1015201                              3408 27 -      4292 T-CTT-CTATGGTAAATCTGGG----------AACCAAT
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            16545 27 +     36558 T-CTT-CTATGGTAAATCTGGG----------AACCAAT
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            12867 27 +     60246 T-CTT-CTATGGTAAATCTGGG----------AACCAAT
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                16352 27 +    109717 T-CTT-CTATGGTAAATCTGGG----------AACCAAT
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 4335 27 -     19505 T-CTT-CTATGGTAAATCTGGG----------AACCAAT
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                21010 27 +     27497 T-CTT-CTATGGTAAATCTGGG----------AACCAAT
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           23466 27 +     26808 T-CTT-CTATGGTAAATCTGGG----------AACCAAT
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                38198 27 +     46535 T-CTT-CTATGGTAAATCTGGG----------AACTAAT
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              20939 27 -     29447 T-CTT-CTATGGTAAATCTGGG----------AACCAAT
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129900886 26 - 159252932 t-ctt-ctctgg-aaatctGGG----------AACCAAT
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129287863 26 - 158578461 t-ctt-ctctgg-aaatcTGGG----------AACCAAT
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 29053 26 +     52776 T-CTT-CTCTGG-AAATCTGGG----------AACCAAT
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13897190 27 -  19261668 t-ctt-ctatagtAAATCTAGG----------AACTGAT
i Fukomys_damarensis.KN123630.1                         I 8 C 0
s Galago_moholi.ctg555                                     216192 27 -    847004 T-CTT-CTGTACTAAATCTGGG----------AACCAAT
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           18553 27 -     43889 T-CTT-CTGTACTAAATCTGGG----------AACCAAT
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          15695 27 +     27357 T-CTT-CTGTGCTAAATCTGGG----------AACCAAT
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               160469 27 +    324696 T-CTT-CTACAGTAAATCTAGG----------AACCAAT
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    188076 27 -    189561 t-ctt-ctatggtAAATCTAAG----------AACCAAT
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           17365 27 -     18683 T-CTT-CTATGGTAAATATGGG----------AACCAAT
i Glis_glis.GliGli_scaffold_79770                       C 0 I 5
s Gorilla_beringei.k141_111300                              10158 28 -     14630 TTCTT-CTATGGTAAATCTAGG----------AACCAAT
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119657258 28 - 195582420 TTCTT-CTATGGTAAATCTAGG----------AACCAAT
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   80685 21 +    118900 T-CTT-CTT------ATATAGG----------AACCAAT
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 I 8
s Hapalemur_alaotrensis.k141_1280836                         6939 27 +     10286 T-CTT-CTATGGTAAATCTGGG----------AACCAAT
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             5420 27 -     11661 T-CTT-CTATGGTAAATCTGGG----------AACCAAT
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                            10744 27 +     56096 T-CTT-CTATGGTAAATCTGGG----------AACCAAT
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        33993 27 -     42470 T-CTT-CTATGGTAAATCTGGG----------AACCAAT
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        50619 27 -     54384 T-CTT-CTATGGTAAATCTGGG----------AACCAAT
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              24367 26 +     53719 T-CTT-CTCTGG-AAATCTGGG----------AACCAAT
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                35206 26 -     91191 --CTT-CTATGGTAAATCTAAG----------AACCAGT
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2561517 27 +  31725842 t-ctt-ctatggtAAATCTAGG----------AAACAAT
i Heterocephalus_glaber.JH602058.1                      I 7 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               63767 27 +     73687 T-CGT-CTGTGGTAAATCTGGG----------AACTAAT
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              152419 27 +    277961 T-CTT-CTATGGTAAATCCGAG----------AACCAAT
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      285458 27 -    477199 T-CTC-CTGTGGTAAAACTGGG----------AACCAAT
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959               3144 27 +     26078 T-CTC-CTGTGGTAAATCTGGG----------AACCAAT
i Hipposideros_galeritus.HipGal_scaffold_52959          C 0 C 0
s Hoolock_leuconedys.ctg79                                     10083 28 -   7690867 TTCTT-CTATGGTAAATCTAGG----------GACCAAT
i Hoolock_leuconedys.ctg79                                 C 0 I 21
s Hyaena_hyaena.HyaHya_flattened_line_20729                 24803 26 -     67322 T-CTT-CTTTGG-AAATCTGGG----------AACCAAT
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           22101 27 -    119109 T-CTT-CTATGATAAATCTGAG----------AACAAAC
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_1816750                             2654 28 +      3202 TTCTT-CTATGGTAAATCTAGG----------GACCAAT
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1136966                               663 28 +      9785 TTCTT-CTATGGTAAATCTAGG----------GACCAAT
i Hylobates_agilis.k141_1136966                         C 0 C 0
s Hylobates_klossii.k141_468230                              4143 28 +      5464 TTCTT-CTATGGTAAATCTAGG----------AACCAAT
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14629489 28 -  25970782 TTCTT-CTATGGTAAATCTAGG----------GACCAAT
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            2041 28 +      4161 TTCTT-CTATGGTCAATCTAAG----------GACCAAT
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                    10429 27 +     22540 T-CTT-CTATGGTAAATCTGGG----------AACCGAT
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7131263 27 +  13083262 T-CTT-CTAGAGTAAATCTGGG----------AACCTAT
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   2477 27 +      3484 T-CTT-CTATGGTAAATCTGGG----------AACCAAT
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              14591 27 +     17520 T-CTT-CTATGGTAAATGTGAG----------AACCAAT
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8580057 23 +  11848649 t-ctt-caatggtAA----GGA----------AACCAAT
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               29210 27 +     37189 T-CTT-CTCTGGTAAATCTGAG----------AACCAAT
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          54917 27 -    147782 T-CTT-CTATAGTAAATCCAGG----------AACCAAC
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    7289 26 +     26176 T-TGT-CTATGGTAAATCTGGG----------GATGAA-
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258412297 27 - 285822530 T-CTT-CTATGGTAAATCTGGG----------AACCAAT
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        29621 27 +     39228 T-CTT-CCATGGTAAATCTGGG----------AACCAAT
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            58985 27 +     63517 T-CTT-CTATGGTAAATCTGGG----------AACCAAT
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        37367 27 -     38897 T-TTT-CTATGGTAAATCTGGG----------AACCAAT
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      3411 27 -     13103 T-CTT-CCATGGTAAATCTGGG----------AACCAAT
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3093120 26 -   3498232 t-ctt-ctctgg-aaaTCTGGA----------AACCAAT
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    21900 27 +     22452 T-CTT-CTATGGTAGATCTGGG----------GACCAAT
i Lepus_americanus.LepAme_scaffold_62849                I 7 C 0
s Lipotes_vexillifer.KE558548.1                            141532 27 +   3060487 t-ctt-ctatggTAAATCTGAG----------AACCAAT
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19253377 28 +  19376315 TTCTT-CTATGGTAAATCTGGG----------AACCAAT
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           16155 27 +     84689 T-CTT-CTGTACTAAATCTGGG----------AACCAAT
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3783890 27 +   6799190 T-CTT-CTGTACTAAATCTGGG----------AACCAAT
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20599687 26 -  62548349 T-CTT-CTGTG-TAAATCTAGG----------AACCAAT
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11096878 26 +  39895028 t-ctt-ctctga-aaatcTGGG----------AACCAAT
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             25126 28 +     74745 TTCTT-CTATGGTAAATCTGGG----------AACCAAT
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12711589 28 +  12821369 TTCTT-CTATGGTAAATCTGGG----------AACCAAT
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                4162 28 -     26467 TTCTT-CTATGGTAAATCTGGG----------AACCAAT
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           52033 28 +     63263 TTCTT-CTATGGTAAATCTGGG----------AACCAAT
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 4143 28 -     26361 TTCTT-CTATGGTAAATCTGGG----------AACCAAT
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_2667654                                 446 28 -      5626 TTCTT-CTATGGTAAATCTGGG----------AACCAAT
i Macaca_leonina.k141_2667654                           C 0 C 0
s Macaca_maura.k141_251854                                  50562 28 -     79256 TTCTT-CTATGGTAAATCTGGG----------AACCAAT
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196040660 28 + 196197964 ttctt-ctatggtAAATCTGGG----------AACCAAT
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11450830 28 +  11645122 ttctt-ctatggtAAATCTGGG----------AACCAAT
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   9516 28 -     46448 TTCTT-CTATGGTAAATCTGGG----------AACCAAT
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                7177 28 -     13212 TTCTT-CTATGGTAAATCTGGG----------AACCAAT
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 20859 28 -     55006 TTCTT-CTATGGTAAATCTGGG----------AACCAAT
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43846281 28 +  43892939 TTCTT-CTATGGTAAATCTGGG----------AACCAAT
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               22143 28 -     24607 TTCTT-CTATGGTAAATCTGGG----------AACCAAT
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               9513 28 -     27140 TTCTT-CTATGGTAAATCTGGG----------AACCAAT
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                703605 27 +    802869 T-CTT-CTATGGTAAATCTGGG----------AACCAAT
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43442549 28 -  43563597 TTCTT-CTATGGTAAATCTGGG----------AACCAAT
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4455352 28 -   4543643 TTCTT-CTATGGTAAATCTGGG----------AACCAAT
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            153876 27 +    252755 t-ctt-ctatggtAAATCTGGG----------AACCAAT
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             41473 27 +     58827 t-ctt-ctatggTAAATCTGGG----------AACCAAT
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36879130 27 +  64221397 T-CTT-CTAGAGTAAATCTGGG----------AACCTAT
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       67379 27 -    234502 T-CTT-CTGTGGTCAATCTGGG----------AACCAAT
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             8272 26 -     87323 T-CGT-CTCTGG-AAATCTGGG----------AACCAAT
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 3110 27 +    115071 T-CTT-CTATAGCAAATCTGGG----------AACCAAT
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1052705 27 -  26018355 T-CTT-CGATGGTAAATCTGGG----------AACCAAT
i Mesocricetus_auratus.KB708139.1                       I 7 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    4185 27 -     12939 T-CTT-CTATGGTAAATTTGAG----------AACCAAT
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16515345 27 +  47401472 t-ctt-ctatggTAAATCTAGG----------AACCAAT
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  44004 28 -     48017 t-CCAGTCACAGTACATTTGGG----------AAACAAC
i Microgale_talazaci.MicTal_scaffold_34660              I 1636 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               26710 27 -     32043 T-CTT-CTGTGGGAAATCTGGG----------AACCAAT
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22825691 27 -  98408828 t-ctg-ctaTGGCAAATCTGAG----------AACCAAT
i Microtus_ochrogaster.CM001673.1                       I 7 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8215060 27 +  10048721 t-ctt-ctgtgGCAAATCTGGG----------AACCAAT
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            39518 27 +     45743 T-CTT-CTGTGGCAAATCTGGG----------AACCAAT
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         7095 28 +     29742 TTCTT-CTATGGCAAATCTGGG----------AACCAAT
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        18616 26 -    104932 T-CTT-CTCTGG-AAATCTGAG----------AACCAAT
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     6030 27 -     12809 T-CTT-CTATGGTAAATCTGGG----------AACCAAT
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 151960 27 +    154973 T-CTT-CTATGGTAAATCTGAG----------AACCAAT
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                165225 27 +    265003 T-CTT-CTGTGGGAAATCTGGG----------AACCAAT
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  8755 27 -     19904 T-TTT-CTATGGTAAATCTAAG----------AACCAAT
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  152096 26 -    168139 T-CTT-CTCTGG-AAATCTGGG----------AGCCAAT
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          26052 27 -    100666 T-CTT-CTATGGTAAATCTGGG----------AAAGAAT
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70772947 27 +  92629107 T-CTT-CTATGGTAAATCCAAA----------ACCCAAT
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75494999 27 +  98207768 T-CTT-CTATGGTAAATCCAAA----------ACCCAAT
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67561751 27 +  89017189 T-CAT-CTATGGTAAATCCAAG----------AACCAAT
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74337722 27 +  97876770 T-CTT-CTATGGTAAATCCAAA----------ACCCAAT
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             15770 27 +     98495 T-CTT-CTATGGTAAATATGGA----------AACCAAT
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 I 5
s Mustela_putorius.JH417978.1                             4430373 26 -  28371801 T-CGT-CTCTGG-AAATCTGGG----------AACCAAT
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     96503 27 -    117718 T-CTT-CTATGGTAAATCTGGA----------AACCAAT
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               973066 27 +   8389877 t-ctt-ctatggtAAATCTGGG----------AATGACT
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5024144 27 +   6462685 t-ctt-ctatggAAGATCTGGG----------AATGACT
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3470573 27 -   3747815 t-ctt-ctatggTAAATCTGGG----------AATGACT
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        15800 27 +     66751 T-CTT-CTATGGTAGATCTGGG----------AATGACT
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             8556 27 -      8794 T-CTT-CTATGGTAAATCTGGG----------AAACAAT
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 C 0
s Nannospalax_galili.KL201303.1                            125429 27 +    362372 T-CTT-CTATGGTAAATCTAGG----------AACCAAT
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                              11358 28 +     48152 TTCTT-CTATGGTAAATCTGGG----------AACCAAT
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4492007 26 -  14209539 t-ctt-ctctgg-aaaTCTGGG----------AACCAAT
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3956551 27 -   4490290 t-ctt-ctatggTAAATCTGAG----------AACCAAT
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  52540 27 +     94413 T-CTT-CTACGGGAAATCTGGG----------AACCAAT
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_762468                            1160 28 -      2755 TTCTT-CTATGGTAAATCTAGG----------GACCAAT
i Nomascus_annamensis.k141_762468                       C 0 C 0
s Nomascus_concolor.k141_256540                              7770 28 -      8966 TTCTT-CTATGGTAAATCTAGG----------GACCAAT
i Nomascus_concolor.k141_256540                         C 0 C 0
s Nomascus_gabriellae.k141_1400361                           1711 28 -      2203 TTCTT-CTATGGTAAATCTAGG----------GACCAAT
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_453                             7023 28 +     12787 TTCTT-CTATGGTAAATCTAGG----------GACCAAT
i Nomascus_siki_b.tarseq_453                        C 0 I 21
s Nomascus_siki_a.k141_421408                                  1625 28 +     16235 TTCTT-CTATGGTAAATCTAGG----------GACCAAT
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                39748 26 +   3668941 t-ctt-cactga-aaATCTGGG----------AACCAAT
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65572925 27 -  95554990 T-CTT-CTGTACTAAATCTGGG----------AACCAAT
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_6040852                             562 27 +      1868 T-CTT-CTGTACTAAATCTGGG----------AACCAAT
i Nycticebus_coucang.k141_6040852                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65681110 27 +  89412551 T-CTT-CTGTACTAAATCTGGG----------AACCAAT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            5000972 27 -  23139505 t-ctt-caatggCAAATCTGAG----------GCCCAGT
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3691842 27 +  10294119 T-CTA-CTATGGTAAATCTGGG----------AACCAAT
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             686706 26 -   3126709 t-ctt-ctctgg-aaaTCTGGG----------AACcaat
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1085730 27 +   1425656 t-ctt-ctatggTAAATCTAAG----------AACCAAT
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         43796 27 +     78940 t-ctt-ctatggtAAATCTAAG----------AACCAAT
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  131499 27 +    145789 T-CTG-CTTTGGCAAATCTGAG----------AACCAAT
i Ondatra_zibethicus.OndZib_scaffold_6821               I 7 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  44415 27 +     62360 T-CTT-CTATGGTAAATCCAGG----------AATCAAT
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7230232 27 -   7562323 t-ctt-ctatggTAAATCTGAG----------AACCAAT
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              65074 27 -     66828 T-CTT-CTGTGGTGAATATGGA----------AACCAAT
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141884916 27 + 163896628 t-ctt-ctatggtAGATCTGGG----------GACCAAT
i Oryctolagus_cuniculus.CM000803.1                      I 7 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      316885 26 -    505867 t-ctt-ctctga-aaatCTGGG----------AACCAAT
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        6053 27 -     53940 T-CTT-CTGTACTAAATCTGGG----------AACCAAT
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18014019 27 -  38779656 t-ctt-ctgtactAAATCTGGG----------AACCAAT
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134084988 26 - 275406953 --CTT-CTATGGTAAATCTAAG----------AACCAAT
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      86229 26 +    140051 --CTT-CTATGGTAAATCTAAG----------AACCAAT
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127579437 28 - 205426864 TTCTT-CTATGGTAAATCTAGG----------AACCAAT
i Pan_paniscus.CM003386.1                               I 45 C 0
s Pan_troglodytes.CM009241.2                            120156597 28 - 196562556 TTCTT-CTATGGTAAATCTAGG----------AACCAAT
i Pan_troglodytes.CM009241.2                            I 45 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  41651 26 +    295523 T-CTT-CTCTGG-AAATCTGGG----------AACCAAT
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3645467 26 +  18214204 t-ctt-ctctgg-aaatctGGG----------AACCAAT
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5035104 26 -   6340057 t-ctt-ctctgg-aaatcTGGG----------AACCAAT
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1073861 26 -   1292953 --CTT-CTATAGTAAATCTAAG----------AACCAAT
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188161338 28 - 188283584 ttctt-ctatggtAAATCTGGG----------AACCAAT
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              4428 28 +     25005 TTCTT-CTATGGTAAATCTGGG----------AACCAAT
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47518710 28 +  47705337 TTCTT-CTATGGTAAATCTGGG----------AACCAAT
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 72701 28 -    104429 TTCTT-CTATGGTAAATCTGGG----------AACCAAT
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   11233 28 +     14967 TTCTT-CTATGGTAAATCTGGG----------AACCAAT
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 7098 28 -      7628 TTCTT-CTATGGTAAATCTGGG----------AACCAAT
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    123128 26 -    135482 T-CTT-CTCTGG-AAATCTGGG----------AACCAAT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          11717 27 -     23713 T-CTT-CTGTACTAAAGCTGGG----------AAACAAT
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           12868 27 +     61070 T-CTT-CTGTACTAAAGCTGGG----------AAACAAT
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       3175 27 +     49596 T-CTT-CTATGGTTTATCAGGG----------AAATAAT
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615458.1                       2840253 27 -   3366660 T-CTT-CTATGGTAAATCTGGG----------AATCAAT
i Peromyscus_maniculatus.KI615458.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    17874 27 -     36578 T-CTT-TTATGGTAAATCTAGG----------AACCTGT
i Petromus_typicus.PetTyp_scaffold_33007                I 23 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              4692 27 +      8220 T-CTT-CTATGGTAAACCTGAG----------AACCAAT
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Piliocolobus_badius.k141_1987485                           4896 28 -      5908 TTCTT-CTATGGTAAATCTGGG----------AACCAAT
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       5515 28 -     17985 TTCTT-CTATGGTAAATCTGGG----------AACCAAT
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            4882 28 +      7694 TTCTT-CTATGGTAAATCTGGG----------AACCAAT
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26743365 28 +  26888534 ttctt-ctatggtAAATCTGGG----------AACCAAT
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306           101303 27 +    112873 T-CTT-CTATGGTAAATCTGGG----------AATGAAT
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990          11174 27 +     21690 T-CTT-CTATGGTAAATCTGAG----------AACCAAT
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       27008 27 +     44506 T-CTT-CTATAGTAAATCTAGG----------AACCAAT
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        27221 27 +     67491 T-CTT-CTATAGTAAATCTAGG----------AACCAAT
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      17460 27 -     98129 T-CTT-CTATAGTAAATCTAGG----------AACCAAT
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     27061 27 +    147771 T-CTT-CTATAGTAAATCTAGG----------AACCAAT
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         3696 27 -     43940 T-CTT-CTATAGTAAATCTAGG----------AACCAAT
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          7779 27 -     55515 T-CTT-CTATAGTAAATCTAGG----------AACCAAT
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         27133 27 +    152463 T-CTT-CTATAGTAAATCTAGG----------AACCAAT
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       4941 27 -    119457 T-CTT-CTATAGTAAATCTAGG----------AACCAAT
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         16855 27 +    134592 T-CTT-CTATAGTAAATCTAGG----------AACCAAT
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          27443 27 -     75465 T-CTT-CTATAGTAAATCTAGG----------AACCAAT
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              192068 28 -    373494 ttctt-ctatggtAAATCTAGG----------AACCAAT
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19812715 28 +  19899266 TTCTT-CTATGGTAAATCTAGG----------AACCAAT
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               8640 28 -     15069 TTCTT-CTATGGTAAATCTGGG----------AACCAAT
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              8755 28 +     14865 TTCTT-CTATGGTAAATCTGGG----------AACCAAT
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                4871 27 -      9567 T-CGT-CTGTGGTAAATCTGAA----------AACTAAT
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6853669 27 +  12164890 t-ctt-ctatggTAAATCTGGG----------AACCAAT
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     22477 27 -     30946 N-NNN-NNNNNNNNNNNNNNNN----------NNNNNNN
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         8773 27 +     11805 T-CTT-CTATGGTAAATCTGGG----------AACCAAT
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           48107 27 +     52369 T-CTT-CTATGGTAAATCTGGG----------AACCAAT
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         40494 27 -     44753 T-CTT-CTATGGTAAATCTGGG----------AACCAAT
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            22417 27 +     27322 T-CTT-CTATGGTAAATCTGGG----------AACCAAT
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       22062 27 -     53241 T-CTT-CTATGGTAAATCTGGG----------AACCAAT
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         44325 27 -     48185 T-CTT-CTATGGTAAATCTGGG----------AACCAAT
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           40086 27 +     77221 t-ctt-ctatagCAAATCTGGG----------AACCAAT
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            7878 27 -     27784 t-ctt-ctgtgggAAATCTGGG----------AACCAAT
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        252019 26 -    344369 T-CGT-CTCTGG-AAATCTGGG----------AACCAAT
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13248683 27 -  17261082 t-ctt-ctatggtAAATCTGGG----------AACCAAT
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             606633 27 -   3946241 t-ctt-ctatggtAAATCTGGG----------AACCAAT
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131541592 26 - 161321710 t-ctt-ctctgg-aaatctGGG----------AACCAAT
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             32746 28 +     56732 TTCTT-CTATGGTAAATCTGGG----------AACCAAT
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6809243 28 +   6970761 TTCTT-CTATGGTAAATCTGGG----------AACCAAT
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             8632 28 +     18040 TTCTT-CTATGGTAAATCTGGG----------AACCAAT
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                22575 27 +     68503 T-CTT-CTATGGTAAATCTAAG----------AACCAAT
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13918693 27 +  90463843 T-CTT-CTATGATAAGTCCAAG----------AAGCAGT
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1794510 27 +   2252614 t-ctt-ctacGGTAAATCTGGG----------AACCAAT
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                            3011 28 -     17045 TTCTT-CTATGGTAAATCTGGG----------AACCAAT
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206380498 28 - 206558726 ttctt-ctatggtAAATCTGGG----------AACCAAT
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44859401 28 -  45163003 TTCTT-CTATGGTAAATCTGGG----------AACCAAT
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                22028 27 +    109198 T-CTT-CTATGGTAAATCTGGG----------AACCAAT
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                      3259 26 -      4338 --CTT-ATATGGTAAATCTAAG----------AACCAAT
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15677462 27 -  43202129 T-CTT-CTATAGTAAATCCAAG----------AACCAAT
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        9376 27 +     34089 T-CTT-CTATAGTAAATCCAAG----------AACCAAT
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              9315 27 -     60842 T-CTT-CTATAGTAAATCCAAG----------AACCAAT
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              9409 27 +     67014 T-CTT-CTATAGTAAATCCAAG----------AACCAAT
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              9386 27 +     60816 T-CTT-CTATAGTAAATCCAAG----------AACCAAT
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 9323 27 -     76454 T-CTT-CTATAGTAAATCCAAG----------AACCAAT
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17346088 27 -  30362882 T-CTT-CTATAGTAAATCCAGG----------AACCAAT
i Sapajus_apella.ctg10                                  C 0 I 5
s Sapajus_macrocephalus.k141_966464                         25409 27 -     62485 T-CTT-CTATAGTAAATCCAGG----------AACCAAT
i Sapajus_macrocephalus.k141_966464                     C 0 I 5
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   41297 37 -    114521 T-CTT-ATGTGGTAAATACAAGAAACCAATAAAACCAAT
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        6247 28 +     15331 TTCTT-CTATGGTAAATCTGGG----------AACCAAT
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      11622 28 +     20762 TTCTT-CTATGGTAAATCTGGG----------AACCAAT
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         121626 28 +    130994 TTCTT-CTATGGTAAATCTGGG----------AACCAAT
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           40406 28 +     46263 TTCTT-CTATGGTAAATCTGGG----------AACCAAT
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     33551 28 +     42640 TTCTT-CTATGGTAAATCTGGG----------AACCAAT
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        16573 28 +     30600 TTCTT-CTATGGTAAATCTGGG----------AACCAAT
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_966                    118464 27 +    343664 T-CTT-CTGCCATAAATCTGGT----------AACCAAT
i Sigmodon_hispidus.SigHis_scaffold_966                 I 124 n 27
s Solenodon_paradoxus.SolPar_flattened_line_1012            25964 27 +    739146 T-CTT-CTATGATAAATCTGGA----------AACCAAT
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17776290 27 -  27805282 t-ctt-ctatggTAAATCTGGG----------AACCAAT
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2244964 27 +   2842873 t-ctt-ctagAGTAAATCTGGG----------AACCTAT
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             240796 26 -    276980 T-CTT-CTCTGG-AAATCTGGG----------AACCAAT
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            34997 26 +     62062 T-CTT-CTCTGG-AAATCTGGG----------AACCAAT
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189276994 27 + 218635234 T-CTT-CTATGGTAAATCTGAG----------AACCAAT
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        19748 28 -  13920577 TTCTT-CTATGGCAAATCTAGG----------GACCAAT
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                4137 27 +     20549 T-CTT-CTATGGTAAACCAGGG----------AACCAAT
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               18230 27 +     45698 T-CAT-CTATGGTAAATCTGGG----------AAACAAT
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      812584 27 +   1148477 T-CTT-CTATGGTAAATTGGGG----------AACCAAT
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  63226 27 +     99546 T-CTT-CTATGGTAAATTGGGG----------AACCAAT
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194012871 28 - 194193292 ttctt-ctatggtAAATCTGGG----------AACCAAT
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                  1414 27 -      3104 T-CTT-CTAGGGTAAATCTGGG----------AAATAAT
i Tolypeutes_matacus.TolMat_scaffold_475685             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  139884 27 -    259118 T-CTT-CTGTGGGAAATCTGGG----------AACCAAC
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        29894 28 +     38948 TTCTT-CTATGGTAAATCTGGG----------AACCAAT
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   23454 28 -     32910 TTCTT-CTATGGTAAATCTGGG----------AACCAAT
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      5355 28 -     12939 TTCTT-CTATGGTAAATCTGGG----------AACCAAT
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       4783 28 -     14244 TTCTT-CTATGGTAAATCTGGG----------AACCAAT
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           46176 28 -     54611 TTCTT-CTATGGTAAATCTGGG----------AACCAAT
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        3977 28 -     11566 TTCTT-CTATGGTAAATCTGGG----------AACCAAT
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     6161 28 -     15592 TTCTT-CTATGGTAAGTCTGGG----------AACCAAT
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          4813 28 +     14371 TTCTT-CTATGGTAAATCTGGG----------AACCAAT
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   3099 28 +     12481 TTCTT-CTATGGTAAATCTGGG----------AACCAAT
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        3080 28 -     24393 TTCTT-CTATGGTAAATCTGGG----------AACCAAT
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       8224 28 -     28054 TTCTT-CTATGGTAAATCTGGG----------AACCAAT
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44663008 28 -  44834318 TTCTT-CTATGGTAAATCTGGG----------AACCAAT
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       5320 28 +     13828 TTCTT-CTATGGTAAATCTGGG----------AACCAAT
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                  10743 27 +     90398 T-CTC-CTATGGTAAATCTGAG----------AACCAAT
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16090758 27 +  31416278 T-CTT-CGGTGGTAAATCTGGG----------AACCAAT
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2802013 27 -   3938065 t-ctt-ctatggTAAATCTGGG----------AACCAAT
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                   10841 27 +     13056 T-CTT-CTATGGTAAATCTGGG----------AACCAAT
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69318962 27 -  96451834 t-ctt-ctatggTAAATCTGAG----------AACCAAT
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                    1699 27 +    136657 T-CTT-GTATGGTAAATCTGGA----------AACCAGT
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 C 0
s Ursus_maritimus.KK498671.1                              6522444 26 +  28682327 t-ctt-ctctgg-aaaTCTGGG----------AACCAAT
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                 10338 27 -     20643 T-CTT-CTATGGTAAATCTGGG----------AACCAAT
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             29873 27 -     33872 T-CTT-CTATGGTAAATCTGGG----------AACCAAT
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1529989 27 -   2331223 t-ctt-ctatggtAAATCTGAG----------AACAAAT
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                146112 26 -    281493 T-CTT-CTCTGA-AAATCTGGG----------AACCAAT
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       132460 27 -    134049 T-CTT-CTGTAGTAAATCTGGG----------AACCTAT
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        221567 26 -    227762 T-CTT-CTCTGG-AAATCTGGG----------AACCAAT
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_202118                     2128 23 -      3360 T-CCT-CAGTGGTGA----GGA----------AACCAAT
i Zapus_hudsonius.ZapHud_scaffold_202118                C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            3547 27 -     13665 T-CTT-CTATGGTAAATCTGAG----------AACCAAT
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Hylobates_pileatus_a.tarseq_592                             37267 2881 -     60944 I
e Tarsius_wallacei.k141_48636                               64696  0 +     65473 C
e Tarsius_lariang.k141_609102                               31387  0 +     42269 C
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Cephalopachus_bancanus.k141_702587                        12545  0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530  0 +    345090 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               18489 21 +    209709 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
s Acinonyx_jubatus.LLWD01000356.1                         2041263 21 +   3721120 AAAA---T-C---ACTTTG-AT-CA----T----T----CAT
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    118961 21 -    189883 AAAG---T-C---ACTGTG-AT-AG----C----T----TAC
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10665203 21 +  23371972 AAAA---T-C---GCTTTG-CT-AA----T----T----TAT
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 I 4
s Ailurus_fulgens.LNAC01000003.1                          7102151 21 -  16596857 AAAA---T-C---GCTTCA-AT-AA----T----T----CGT
i Ailurus_fulgens.LNAC01000003.1                        C 0 I 4
s Allactaga_bullata.AllBul_scaffold_141108                   2332 21 -      7259 AAAA---T-T---ACTTAA-AT-AA----T----T----CAT
i Allactaga_bullata.AllBul_scaffold_141108              C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   6376 21 -     60446 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         7090 21 -     29318 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         6028 21 +     38766 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          6986 21 -     80423 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              1938 21 +     19852 AAAA---T-A---CTTTTG-AT-AA----T----T----CAC
i Alouatta_belzebul.k141_276091                         C 0 I 17
s Alouatta_caraya.k141_664908                                4161 21 -     12443 AAAA---T-A---CTTTTG-AT-AA----T----T----CAC
i Alouatta_caraya.k141_664908                           C 0 I 17
s Alouatta_discolor.k141_2023149                             1481 21 +      5070 AAAA---T-A---CTTTTG-AT-AA----T----T----CAC
i Alouatta_discolor.k141_2023149                        C 0 I 17
s Alouatta_juara.k141_799181                                 1228 21 -      1641 AAAA---T-A---CTTTTG-AT-AA----T----T----CAC
i Alouatta_juara.k141_799181                            C 0 I 17
s Alouatta_macconnelli.k141_2318944                          3967 21 -     24210 AAAA---T-A---CTTTTG-AT-AA----T----T----CAC
i Alouatta_macconnelli.k141_2318944                     C 0 I 17
s Alouatta_nigerrima.k141_494922                              471 21 -      8325 AAAA---T-A---CTTTTG-AT-AA----T----T----CAC
i Alouatta_nigerrima.k141_494922                        C 0 I 17
s Alouatta_palliata.k141_405616                              6385 21 +     16794 AAAA---T-A---CTTTTG-AT-AA----T----T----CAC
i Alouatta_palliata.k141_405616                         C 0 I 17
s Alouatta_puruensis.k141_347198                              414 21 +      9111 AAAA---T-A---CTTTTG-AT-AA----T----T----CAC
i Alouatta_puruensis.k141_347198                        C 0 I 17
s Alouatta_seniculus.k141_790278                             5662 21 -      9835 AAAA---T-A---CTTTTG-AT-AA----T----T----CAC
i Alouatta_seniculus.k141_790278                        C 0 I 17
s Ammotragus_lervia.NIVO01013474.1                        3528408 21 +   4113121 AAAA---T-T---GCTCGG-AT-AA----T----T----CAT
i Ammotragus_lervia.NIVO01013474.1                      C 0 I 4
s Anoura_caudifer.AnoCau_scaffold_422                      394496 21 -    631301 AAAA---T-T---GCTTTG-GT-AA----T----T----CAT
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             5571 21 +     55446 AAAA---C-T---GCTCTG-AT-AA----T----T----CAT
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 I 4
s Aotus_azarae.k141_3170768                                 67277 15 +     78111 -------------TTTTTG-AT-AA----T----T----CAC
i Aotus_azarae.k141_3170768                             I 6 I 17
s Aotus_griseimembra.k141_3275623                           10221 15 +     22701 -------------TTTTTG-AT-AA----T----T----CAC
i Aotus_griseimembra.k141_3275623                       I 6 I 17
s Aotus_nancymaae.KZ196176.1                              5754188 15 +   9889416 -------------tttttg-at-aa----t----t----caC
i Aotus_nancymaae.KZ196176.1                            I 6 I 17
s Aotus_trivirgatus.k141_1740727                            10765 15 -    104377 -------------TTTTTG-AT-AA----T----T----CAC
i Aotus_trivirgatus.k141_1740727                        I 6 I 17
s Aotus_vociferans.k141_718647                              10794 15 +     23246 -------------TTTTTG-AT-AA----T----T----CAC
i Aotus_vociferans.k141_718647                          I 6 I 17
s Aplodontia_rufa.AprRuf_scaffold_101456                     3440 18 +     11424 AAAG---C-C---ACTTTG-AT-AA----T----T-------
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 I 20
s Arctocebus_calabarensis.k141_587554                        7362 21 +      9265 AAAA---T-T---GTTTTC-AT-AA----C----T----CAT
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                12788 21 -     29036 AAAA---T-T---GCTTTG-GT-AA----T----T----CAT
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9544072 21 +  39197703 AAAA---T-A---CTTTTG-AT-AA----T----T----CAC
i Ateles_geoffroyi_b.tarseq_2582                           C 0 I 17
s Ateles_belzebuth.k141_1348307                             65346 21 +     85812 AAAA---T-A---CTTTTG-AT-AA----T----T----CAC
i Ateles_belzebuth.k141_1348307                         C 0 I 17
s Ateles_chamek.k141_1072810                                16359 21 +     89302 AAAA---T-A---CTTTTG-AT-AA----T----T----CAC
i Ateles_chamek.k141_1072810                            C 0 I 17
s Ateles_geoffroyi_a.k141_1300742                             20860 21 -     58268 AAAA---T-A---CTTTTG-AT-AA----T----T----CAC
i Ateles_geoffroyi_a.k141_1300742                         C 0 I 17
s Ateles_marginatus.k141_899112                             68854 21 +    119057 AAAA---T-A---CTTTTG-AT-AA----T----T----CAC
i Ateles_marginatus.k141_899112                         C 0 I 17
s Ateles_paniscus.k141_1631200                              10823 21 -     25888 AAAA---T-A---CTTTTG-AT-AA----T----T----CAC
i Ateles_paniscus.k141_1631200                          C 0 I 17
s Avahi_laniger.k141_2840928                                11892 21 -     16375 AAAA---T-T---GCTTTA-AT-AA----C----T----CAT
i Avahi_laniger.k141_2840928                            C 0 I 32
s Avahi_peyrierasi.k141_798820                               5508 21 +      6337 AAAA---T-T---GCTTTA-AT-AA----C----T----CAT
i Avahi_peyrierasi.k141_798820                          C 0 I 32
s Balaenoptera_acutorostrata.KI537095.1                  26385798 21 +  51448160 AAAA---T-T---GCTTTG-AT-AA----T----T----CAT
i Balaenoptera_acutorostrata.KI537095.1                 C 0 I 4
s Balaenoptera_bonaerensis.DF502048.1                       10971 21 -     13118 AAAA---T-T---GCTTTG-AT-AA----T----T----CAT
i Balaenoptera_bonaerensis.DF502048.1                   C 0 I 4
s Beatragus_hunteri.BeaHun_scaffold_21644                   50380 21 -     72089 AAAA---T-T---GCTCTG-AT-GA----C----T----CAT
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 I 4
s Bison_bison.KN264915.1                                   305328 21 -   6870073 AAAA---T-T---GCTCTG-AT-AA----T----T----CAT
i Bison_bison.KN264915.1                                C 0 I 4
s Bos_indicus.CM003021.1                                 22959434 21 + 161108492 AAAA---T-T---GCTCTG-AT-AA----T----T----CAT
i Bos_indicus.CM003021.1                                C 0 I 4
s Bos_mutus.JH883513.1                                     421613 21 +    998990 AAAA---T-T---GCTCTG-AT-AA----T----T----CAT
i Bos_mutus.JH883513.1                                  C 0 I 4
s Bos_taurus.CM000177.6                                  22668086 21 + 158972876 AAAA---T-T---GCTCTG-AT-AA----T----T----CAT
i Bos_taurus.CM000177.6                                 C 0 I 4
s Bubalus_bubalis.KI419065.1                               676924 21 +   1914593 AAAA---T-T---GCTCTG-AT-AA----T----T----CAT
i Bubalus_bubalis.KI419065.1                            C 0 I 4
s Cacajao_ayresi.k141_724503                               118692 21 -    171031 AAAA---T-A---CCTTTG-AT-AA----T----T----CAC
i Cacajao_ayresi.k141_724503                            C 0 I 17
s Cacajao_calvus.k141_96166                                 17712 21 +    125063 AAAA---T-A---CCTTTG-AT-AA----T----T----CAC
i Cacajao_calvus.k141_96166                             C 0 I 17
s Cacajao_hosomi.k141_303789                                19759 21 -    216513 AAAA---T-A---CCTTTG-AT-AA----T----T----CAC
i Cacajao_hosomi.k141_303789                            C 0 I 17
s Cacajao_melanocephalus.k141_1160263                       12302 21 -    134917 AAAA---T-A---CCTTTG-AT-AA----T----T----CAC
i Cacajao_melanocephalus.k141_1160263                   C 0 I 17
s Camelus_bactrianus.KN276303.1                           3224908 21 -   8989139 AAAA---T-T---GCTTTG-AT-AA----T----T----CAT
i Camelus_bactrianus.KN276303.1                         C 0 I 4
s Camelus_dromedarius.KN271192.1                           402608 21 -  15254737 AAAA---T-T---GCCTTG-AT-AA----T----T----CAT
i Camelus_dromedarius.KN271192.1                        C 0 I 4
s Camelus_ferus.KB016973.1                                2978346 21 +   6889770 AAAA---T-T---GCTTTG-AT-AA----T----T----CAT
i Camelus_ferus.KB016973.1                              C 0 I 4
s CanFam4.chr31                                          11528054 21 +  39901454 AAAA---T-T---GCTTTG-AT-AA----T----T----CAT
i CanFam4.chr31                                         C 0 I 4
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   23028 21 +     87036 AAAA---T-T---GCTTTG-AT-AA----T----T----CAT
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 I 4
s Canis_lupus_dingo.QKWQ01001993.1                       11274951 21 -  35597290 AAAA---T-T---GCTTTG-AT-AA----T----T----CAT
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 I 4
s Canis_lupus_familiaris.chr31                           11097448 21 +  39895921 AAAA---T-T---GCTTTG-AT-AA----T----T----CAT
i Canis_lupus_familiaris.chr31                          C 0 I 4
s Canis_lupus_orion.HG994411.1                           16464233 21 -  44759192 AAAA---T-T---GCTTTG-AT-AA----T----T----CAT
i Canis_lupus_orion.HG994411.1                          C 0 I 4
s Capra_aegagrus.CM003214.1                              21335841 21 + 157394656 AAAA---T-T---GCTCGG-AT-AA----T----T----CAT
i Capra_aegagrus.CM003214.1                             C 0 I 4
s Capra_hircus.CM004562.1                               135714194 21 - 157403528 AAAA---T-T---GCTCGG-AT-AA----T----T----CAT
i Capra_hircus.CM004562.1                               C 0 I 4
s Capromys_pilorides.CapPil_scaffold_780116                   427 14 +      1571 AAAA---T-T---GCTTTG-AT--------------------
i Capromys_pilorides.CapPil_scaffold_780116             C 0 I 3
s Carollia_perspicillata.CarPer_scaffold_4436               63782 21 +     67245 AAAA---T-T---GCTTTG-GT-AA----T----T----CAT
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_1326                      902 21 -    202837 AAAA---T-T---GATTTG-AT-AA----T----T----CAT
i Castor_canadensis.CasCan_scaffold_1326                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   164651 21 -    276539 AAAA---T-T---GCTTTG-AT-AA----T----T----CAT
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 I 1
s Cavia_aperea.AVPZ01000278.1                            15790586 21 -  24422027 NNAA---T-T---GTTTAG-GT-A--A--T----A----AAG
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15802525 21 -  24440124 aaaa---t-t---gtttaG-GT-A--A--T----A----AAG
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       180697 21 +    436027 AAAA---T-T---GTTTAG-GT-A--A--T----A----AAG
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18896432 15 -  29618158 -------------CCTTTG-AT-AA----T----T----CAC
i Cebus_albifrons.Contig22                              I 5 I 17
s Cebus_olivaceus.k141_93739                                13082 15 -     26817 -------------CCTTTG-AT-AA----T----T----CAC
i Cebus_olivaceus.k141_93739                            I 5 I 17
s Cebus_unicolor.k141_239009                                17326 15 +     25043 -------------CCTTTG-AT-AA----T----T----CAC
i Cebus_unicolor.k141_239009                            I 5 I 17
s Ceratotherium_simum.JH767818.1                          4369878 21 +   7569818 AAAA---T-T---GCTTTG-AT-AA----T----T----CAT
i Ceratotherium_simum.JH767818.1                        C 0 I 4
s Ceratotherium_simum_cottoni.CerCot_scaffold_171732           35 21 +      8380 AAAA---T-T---GCTTTG-AT-AA----T----T----CAT
i Ceratotherium_simum_cottoni.CerCot_scaffold_171732    C 0 I 4
s Cercocebus_atys.KQ010443.1                              6560316 21 +   6739814 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      31793 21 +     60454 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          6997 21 -     21101 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         64307 21 -    107033 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        7167 21 -     17608 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          4335 21 +     45019 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           4611 21 +     15177 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          7217 21 +     16677 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           29413 21 +     35983 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11995938 21 +  12117833 AAAA---T-A---GCTTTG-AT-AA----T----T----CAT
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46482920 21 +  46592721 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                       1031 21 -     27215 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       7231 21 +     35577 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        7025 21 -     25661 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        7197 21 -     17744 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        26566 21 +     37128 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           5592 21 -      6963 AAAA---T-T---GCTCTG-AT-AA----T----T----CAT
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 I 4
s Cheirogaleus_major.k141_1157592                           64108 21 -     68416 AAAA---T-T---GCTGTG-AT-AA----C----T----CAT
i Cheirogaleus_major.k141_1157592                       C 0 I 32
s Cheirogaleus_medius.k141_854352                             410 21 +     27737 AAAA---T-T---GCTTTG-AT-AA----C----T----CAT
i Cheirogaleus_medius.k141_854352                       C 0 I 32
s Cheracebus_lucifer.k141_619653                            10383 21 -     18223 AAAA---T-A---CCTTTG-AT-AA----T----T----CAC
i Cheracebus_lucifer.k141_619653                        C 0 I 17
s Cheracebus_lugens.k141_996499                              2124 21 +    188999 AAAA---T-A---CCTTTG-AT-AA----T----T----CAC
i Cheracebus_lugens.k141_996499                         C 0 I 17
s Cheracebus_regulus.k141_2128895                           46423 21 +     57117 AAAA---T-A---CCTTTG-AT-AA----T----T----CAC
i Cheracebus_regulus.k141_2128895                       C 0 I 17
s Cheracebus_torquatus.k141_315545                          51103 21 +     54541 AAAA---T-A---CCTTTG-AT-AA----T----T----CAC
i Cheracebus_torquatus.k141_315545                      C 0 I 17
s Chinchilla_lanigera.JH721867.1                         15965275 20 +  43084221 AAAA---T-T---GCTTTA-AT-A-----A----T----AAA
i Chinchilla_lanigera.JH721867.1                        C 0 I 20
s Chiropotes_israelita.k141_1189915                         75904 21 +    196370 AAAA---T-A---CCTTTG-AT-AA----T----T----CAC
i Chiropotes_israelita.k141_1189915                     C 0 I 17
s Chiropotes_sagulatus.k141_773804                          20085 21 +     40510 AAAA---T-A---CCTTTG-AT-AA----T----T----CAC
i Chiropotes_sagulatus.k141_773804                      C 0 I 17
s Chlorocebus_aethiops.ctg22                             15144751 21 -  15256731 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      39215 21 -     53260 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101149774 21 + 101219884 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                19614 21 -     21363 AAAA---T-T---GCTTTG-AT-AA----T----T----TGT
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 I 4
s Choloepus_hoffmanni.KN194586.1                           764918 21 +    964067 AAAA---T-T---GCTTTG-AT-AA----T----T----TGT
i Choloepus_hoffmanni.KN194586.1                        C 0 I 4
s Chrysochloris_asiatica.ChrAsi_scaffold_304221               201 21 -      7053 AAAA---C-C---ACTTT-GAT-AA----T----T----TAG
i Chrysochloris_asiatica.ChrAsi_scaffold_304221         C 0 I 16
s Colobus_angolensis.KN985967.1                          10889546 21 +  10971483 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147667474 21 + 156195979 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            19457 21 +     23629 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60623907 21 +  78930452 AAAA---T-T---GCTCTG-GT-AA----T----T----CAT
i Condylura_cristata.JH655880.1                         C 0 I 38
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         4289 25 -      5782 AAAA---T-T---GTTTTC-AT-AA----TTCACT----CAT
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 283870 21 -    399297 AAAA---T-C---ACTGTG-AT-AG----C----T----CAT
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53036191 21 +  72327488 AAAA---T-C---ACCATG-AT-AG----T----T----CAT
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              3800 21 -     22648 AAAA---T-G---GCACTG-AT-AA----T----T----CAT
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 I 26
s Cryptoprocta_ferox.CryFer_flattened_line_19014            59276 21 -     70449 AAAA---T-C---ACTTTG-AT-AA----T----T----CAT
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  216013 21 -    956709 AAAA---T-T---GCTATG-AC-TA----T----A----AAT
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 36794 14 -     67205 AAAA---T-T---GCTTTG-AT--------------------
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 I 4
s Cuniculus_paca.CunPac_flattened_line_16637                21780 21 +     26546 AAAA---T-T---GCTTTG-AT-A--A--T----A----AAT
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 I 26
s Dasyprocta_punctata.DasPun_flattened_line_634             62923 21 -    236241 AAAT---T-T---GCTTTG-AC-A--A--T----A----AAT
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          186636 21 -   6883506 aaaa---t-t---gttttg-at-tA----T----T----CAT
i Dasypus_novemcinctus.JH568778.1                       C 0 I 4
s Daubentonia_madagascariensis.ctg11                     16850054 21 +  31942871 AAAA---T-T---GCTTTA-AC-AA----C----T----CAT
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80042394 21 -  96802777 AAAA---T-T---GCTCTG-AT-AA----T----T----CAT
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18703000 21 -  18957592 AAAA---T-T---GCTTTG-AT-AA----T----T----CAT
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 328277 21 +    993696 AAAA---T-T---GCTTTG-AT-AA----T----T----CAT
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 I 4
s Diceros_bicornis.DicBicMic_scaffold_9545                   8911 21 +    151128 AAAA---T-T---GCTTTG-AT-AA----T----T----CAT
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 I 4
s Dinomys_branickii.DinBra_scaffold_1996                   160743 20 +    228994 AAAA---T-T---GCCTTA-AT-A-----G----T----AAA
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3661199 21 +   4240102 ATAA---T-T---GCTTTC-CG-AA----T----T----CAT
i Dipodomys_ordii.KN672545.1                            C 0 I 25
s Dipodomys_stephensi.DipSte_scaffold_84338                  3573 21 -     11986 ATAA---T-T---GCTTTC-CT-AA----T----T----CAT
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 I 25
s Dolichotis_patagonum.DolPat_scaffold_14102                41488 21 -     73477 AAAA---T-T---GCTTTG-AA-A--A--C----A----AAG
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 I 21
s Echinops_telfairi.JH980316.1                           23002410 21 -  44670279 AAAA---G-C---ACTTT-GAT-AA----T----T----CAA
i Echinops_telfairi.JH980316.1                          C 0 I 20
s Eidolon_helvum.KE772537.1                                 14999 25 +     24177 aaaa---t-t---gttttg-at-aa----CTCATT----CAT
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1498323 21 +   1727528 AAAA---T-T---GCTCGG-AT-AA----T----T----CAT
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 I 4
s Elephantulus_edwardii.JH947210.1                        7835177 16 +  15467074 AGAA---T-C---A------AT-AA----C----T----TAG
i Elephantulus_edwardii.JH947210.1                      I 34 I 45
s Ellobius_lutescens.LOEQ01003611.1                        244890 11 -    369425 GAAA---T-C---ACTGT------------------------
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01076532.1                           1234 11 +      9159 GAAA---T-C---ACTGT------------------------
i Ellobius_talpinus.LOJH01076532.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85879201 21 +  99434291 AAAA---T-T---GTTTTG-CT-AA----T----T----CAT
i Enhydra_lutris.KZ291749.1                             C 0 I 4
s Eptesicus_fuscus.JH977687.1                             4710764 21 +   6522550 AAAA---T-T---ACTTTG-AT-AA----T----T----CAT
i Eptesicus_fuscus.JH977687.1                           C 0 I 22
s Equus_asinus.JREZ01000062.1                             5858140 21 -   7175178 AAAA---T-T---GCTTTG-AT-AA----T----T----CAT
i Equus_asinus.JREZ01000062.1                           C 0 I 4
s Equus_caballus.CM000402.2                              13356626 21 +  41866177 AAAA---T-T---GCTTTG-AT-AA----T----T----CAT
i Equus_caballus.CM000402.2                             C 0 I 4
s Equus_przewalskii.ATBW01073585.1                          18116 21 +     92910 AAAA---T-T---GCTTTG-AT-AA----T----T----CAT
i Equus_przewalskii.ATBW01073585.1                      C 0 I 4
s Erinaceus_europaeus.JH835290.1                         11543292 20 +  16010500 AAAA---G-T----TTCTA-AT-GA----T----T----CAC
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48781784 21 -  48907691 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          320641 21 +    330699 AAAA---T-T---GCTTTG-AT-AA----T----T----CAT
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 I 4
s Eubalaena_japonica.EubJap_flattened_line_7756             67097 21 +     89355 AAAA---T-T---GCTTGG-AT-AA----T----T----CAT
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 I 4
s Eulemur_albifrons.k141_715837                             10176 21 +     13586 AACA---T-T---GCTTTA-AT-AA----C----T----CAT
i Eulemur_albifrons.k141_715837                         C 0 I 25
s Eulemur_collaris.k141_1015201                              3435 21 -      4292 AACA---T-T---GCTTTA-AT-AA----C----T----CAT
i Eulemur_collaris.k141_1015201                         C 0 I 25
s Eulemur_coronatus.k141_3240342                            16572 21 +     36558 AACA---T-T---GCTTTA-AT-AA----C----T----CAT
i Eulemur_coronatus.k141_3240342                        C 0 I 25
s Eulemur_flavifrons.k141_903901                            12894 21 +     60246 AACA---T-T---GCTTTA-AT-AA----C----T----CAT
i Eulemur_flavifrons.k141_903901                        C 0 I 25
s Eulemur_fulvus.k141_653297                                16379 21 +    109717 AACA---T-T---GCTTTA-AT-AA----C----T----CAT
i Eulemur_fulvus.k141_653297                            C 0 I 25
s Eulemur_macaco.k141_747087                                 4362 21 -     19505 AACA---T-T---GCTTTA-AT-AA----C----T----CAT
i Eulemur_macaco.k141_747087                            C 0 I 25
s Eulemur_mongoz.k141_825972                                21037 21 +     27497 AACA---T-T---GCTTTA-AT-AA----C----T----CAT
i Eulemur_mongoz.k141_825972                            C 0 I 25
s Eulemur_rubriventer.k141_411740                           23493 21 +     26808 AACA---T-T---GCTTTA-AT-AA----C----T----CAT
i Eulemur_rubriventer.k141_411740                       C 0 I 25
s Eulemur_rufus.k141_1620292                                38225 21 +     46535 AACA---T-T---GCTTTA-AT-AA----C----T----CAT
i Eulemur_rufus.k141_1620292                            C 0 I 25
s Eulemur_sanfordi.k141_186399                              20966 21 -     29447 AACA---T-T---GCTTTA-AT-AA----C----T----CAT
i Eulemur_sanfordi.k141_186399                          C 0 I 25
s Felis_catus.CM001386.2                                129900912 21 - 159252932 AAAA---T-C---ACTTTG-AT-AA----T----T----CAT
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129287889 21 - 158578461 AAAA---T-C---ACTTTG-AT-AA----T----T----CAT
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 29079 21 +     52776 AAAA---T-C---ACTTTG-AT-AA----T----T----CAT
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13897217 21 -  19261668 AAAA---T-T---GTTTTG-AT-A--A--T----A----AAT
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     216219 19 -    847004 AAAA---T-T---G--TTA-AT-AA----C----T----CAT
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           18580 19 -     43889 AAAA---T-T---G--TTA-AT-AA----C----T----CAT
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          15722 19 +     27357 AAAA---T-T---G--TTA-AT-AA----C----T----CAT
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               160496 21 +    324696 TAAA---T-T---GCTTTG-AT-AA----T----T----CAT
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    188103 21 -    189561 AAAA---T-T---GCTCTG-AT-AA----T----T----CAT
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 I 28
s Glis_glis.GliGli_scaffold_79770                           17397 13 -     18683 ---------------TTTG-TT-AA----T----T----CAT
i Glis_glis.GliGli_scaffold_79770                       I 5 C 0
s Gorilla_beringei.k141_111300                              10186 21 -     14630 AAAA---T-A---GCTTTG-AT-AT----T----T----CAC
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119657286 21 - 195582420 AAAA---T-A---GCTTTG-AT-AT----T----T----CAC
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   80714 13 +    118900 ---------------TTTG-TT-AA----T----T----CAT
i Graphiurus_murinus.GraMur_scaffold_4493               I 8 C 0
s Hapalemur_alaotrensis.k141_1280836                         6966 21 +     10286 AACA---T-T---GCTTTA-AT-AA----C----T----CAT
i Hapalemur_alaotrensis.k141_1280836                    C 0 I 25
s Hapalemur_gilberti.k141_279011                             5447 21 -     11661 AACA---T-T---GCTTTA-AT-AA----C----T----CAT
i Hapalemur_gilberti.k141_279011                        C 0 I 25
s Hapalemur_griseus.k141_1387522                            10771 21 +     56096 AACA---T-T---GCTTTA-AT-AA----C----T----CAT
i Hapalemur_griseus.k141_1387522                        C 0 I 25
s Hapalemur_meridionalis.k141_186231                        34020 21 -     42470 AACA---T-T---GCTTTA-AT-AA----C----T----CAT
i Hapalemur_meridionalis.k141_186231                    C 0 I 25
s Hapalemur_occidentalis.k141_797938                        50646 21 -     54384 AACA---T-T---GCCTTA-AT-AA----C----T----CAT
i Hapalemur_occidentalis.k141_797938                    C 0 I 25
s Helogale_parvula.HelPar_flattened_line_22962              24393 21 +     53719 AAAA---T-C---ACTCTA-AT-AA----T----T----CAT
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                35232 21 -     91191 AAAA---T-T---GCTCGG-AT-AA----T----T----CAT
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 I 4
s Heterocephalus_glaber.JH602058.1                        2561544 20 +  31725842 AAAA---T-T---GCTTTC-AT-A-----T----A----AAT
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               63794 25 +     73687 AAAA---T-C---GCTTCG-AT-AATATAT----T----CAG
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 I 35
s Hippopotamus_amphibius.HipAmp_scaffold_1308              152446 21 +    277961 AAAA---T-T---CCTTTG-AT-AA----T----T----CAT
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 I 4
s Hipposideros_armiger.JXIK01001085.1                      285485 25 -    477199 AAAA---T-T---GCTTTG-AT-AA----TCCATT----CAC
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959               3171 25 +     26078 AAAA---T-T---GCTTTG-AT-AA----TCCACT----CAC
i Hipposideros_galeritus.HipGal_scaffold_52959          C 0 C 0
s Hoolock_leuconedys.ctg315                                   351202 21 +    431944 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Hoolock_leuconedys.ctg315                                I 485 I 113
s Hyaena_hyaena.HyaHya_flattened_line_20729                 24829 21 -     67322 AAAA---T-C---ACTTTG-AT-AA----T----T----CAT
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           22128 21 -    119109 AAAA---T-T---GCTTTG-AT-A--A--T----A----AAG
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_1816750                             2682 21 +      3202 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1136966                               691 21 +      9785 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Hylobates_agilis.k141_1136966                         C 0 C 0
s Hylobates_klossii.k141_468230                              4171 21 +      5464 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14629517 21 -  25970782 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            2069 21 +      4161 AAAA---T-A---GCTTTG-AT-AA----T----T----CCT
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                    10456 14 +     22540 AAAA---T-T---GCTTTG-AT--------------------
i Hystrix_cristata.HysCri_scaffold_50788                C 0 I 3
s Ictidomys_tridecemlineatus.JH393315.1                   7131290 21 +  13083262 AAAA---T-C---ACTTTG-AT-AA----C----T----CAT
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   2504 21 +      3484 AAAA---T-T---GCTTTA-AT-AA----C----T----CAT
i Indri_indri.k141_2197838                              C 0 I 32
s Inia_geoffrensis.IniGeo_flattened_line_66725              14618 21 +     17520 AAAA---T-T---GCTCTG-AT-CA----T----T----CAT
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 I 4
s Jaculus_jaculus.JH725517.1                              8580080 21 +  11848649 AAAA---T-T---GCTTAG-AT-AA----T----T----CAT
i Jaculus_jaculus.JH725517.1                            C 0 I 40
s Kogia_breviceps.KogBre_flattened_line_35920               29237 21 +     37189 AAAA---T-T---GCTTTG-AT-AA----T----T----CAT
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 I 4
s Lagothrix_lagothricha.k141_12968                          54944 21 -    147782 AAAA---T-A---CTTTTG-AT-AA----T----T----CAC
i Lagothrix_lagothricha.k141_12968                      C 0 I 17
s Lasiurus_borealis.LasBor_scaffold_59542                    7315 21 +     26176 AAAA---T-T---GCTTTG-AT-AA----T----T----CAT
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 I 22
s Lemur_catta.scaffold_1                                258412324 21 - 285822530 AACA---T-T---GCTTTA-AT-AA----C----T----CAT
i Lemur_catta.scaffold_1                                C 0 I 25
s Lepilemur_ankaranensis.k141_884009                        29648 21 +     39228 AAAA---T-T---GCTTTA-AT-AA----C----T----CAT
i Lepilemur_ankaranensis.k141_884009                    C 0 I 32
s Lepilemur_dorsalis.k141_134267                            59012 21 +     63517 AAAA---T-T---GCTTTA-AT-AA----C----T----CAT
i Lepilemur_dorsalis.k141_134267                        C 0 I 32
s Lepilemur_ruficaudatus.k141_574529                        37394 21 -     38897 AAAA---T-T---GCTTTA-AT-AA----C----T----CAT
i Lepilemur_ruficaudatus.k141_574529                    C 0 I 32
s Lepilemur_septentrionalis.k141_710646                      3438 21 -     13103 AAAA---T-T---GCTTTA-AT-AA----C----T----CAT
i Lepilemur_septentrionalis.k141_710646                 C 0 I 32
s Leptonychotes_weddellii.KB714749.1                      3093146 21 -   3498232 AAAA---T-C---ACTTTG-AT-AA----T----T----CAT
i Leptonychotes_weddellii.KB714749.1                    C 0 I 4
s Lepus_americanus.LepAme_scaffold_62849                    21927 21 +     22452 CAAA---T-T---GTTTTG-AT-AA----T----C----CAT
i Lepus_americanus.LepAme_scaffold_62849                C 0 I 25
s Lipotes_vexillifer.KE558548.1                            141559  6 +   3060487 AAAA---T-T--------------------------------
i Lipotes_vexillifer.KE558548.1                         C 0 I 7
s Lophocebus_aterrimus.ctg55                             19253405 21 +  19376315 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           16182 21 +     84689 AAAA---T-T---GTTTTA-AT-AA----C----T----CAT
i Loris_lydekkerianus.k141_550999                       C 0 I 19
s Loris_tardigradus.ctg97                                 3783917 21 +   6799190 AAAA---T-T---GTTTTA-AT-AA----C----T----CAT
i Loris_tardigradus.ctg97                               C 0 I 19
s Loxodonta_africana.GL010040.1                          20599713 25 -  62548349 AAAA---T-T---ACTTTG-AT-AATATAT----T----CAG
i Loxodonta_africana.GL010040.1                         C 0 I 16
s Lycaon_pictus.CM007556.1                               11096904 21 +  39895028 AAAA---T-T---GCTTTG-AT-AA----T----T----CAT
i Lycaon_pictus.CM007556.1                              C 0 I 4
s Macaca_arctoides.k141_2201161                             25154 21 +     74745 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12711617 21 +  12821369 AAAA---T-A---GCTTTG-AT-AG----T----T----CAC
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                4190 21 -     26467 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           52061 21 +     63263 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 4171 21 -     26361 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_2667654                                 474 21 -      5626 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Macaca_leonina.k141_2667654                           C 0 C 0
s Macaca_maura.k141_251854                                  50590 21 -     79256 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196040688 21 + 196197964 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11450858 21 +  11645122 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   9544 21 -     46448 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                7205 21 -     13212 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 20887 21 -     55006 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43846309 21 +  43892939 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               22171 21 -     24607 AAAA---T-A---GCTTTG-AT-AG----T----T----CAC
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               9541 21 -     27140 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                703632 25 +    802869 AAAA---T-T---GCTTTG-AT-AA----TTCATT----CAT
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43442577 21 -  43563597 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4455380 21 -   4543643 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Mandrillus_sphinx.Contig144                           C 0 I 27
s Manis_javanica.JSZB01003966.1                            153903 21 +    252755 AAAA---T-T---GCTTTG-AT-AA----T----T----CAC
i Manis_javanica.JSZB01003966.1                         C 0 I 4
s Manis_pentadactyla.KN017078.1                             41500 21 +     58827 AAAA---T-T---GCTTTG-AT-AA----T----T----CAT
i Manis_pentadactyla.KN017078.1                         C 0 I 4
s Marmota_marmota.CZRN01000005.1                         36879157 21 +  64221397 AAAA---C-C---ACTTTG-AT-AA----C----T----CAT
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       67406 25 -    234502 AAAA---T-G---GCTTTG-AT-AA----TTCATT----CAT
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             8298 21 -     87323 AAAA---T-C---GCTTTG-CT-AA----T----T----CAT
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 I 4
s Meriones_unguiculatus.MerUng_scaffold_9483                 3137 20 +    115071 AAAA---T-C---A-TGTG-AG-AG----A----T----CAC
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1052732 21 -  26018355 AAAA---T-C---ACCATG-AT-AG----C----T----CAC
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    4212 17 -     12939 AAAA---T-T---GCTTTG-AT-AA----T------------
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 I 4
s Microcebus_murinus.CM007691.1                          16515372 21 +  47401472 AAAA---T-T---GCTTTG-AT-AA----C----T----CAT
i Microcebus_murinus.CM007691.1                         C 0 I 32
s Microgale_talazaci.MicTal_scaffold_34660                  44032 21 -     48017 AAAG---G-C---ACTTT-GAT-AA----T----T----TAA
i Microgale_talazaci.MicTal_scaffold_34660              C 0 I 22
s Micronycteris_hirsuta.MicHir_scaffold_37978               26737 21 -     32043 AAAC---T-T---GCTTTG-AT-AA----T----T----CAT
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22825718 11 -  98408828 GAAA---T-C---ACTGT------------------------
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8215087 25 +  10048721 AAAA---T-T---GCTTTG-AT-AA----T----TCATTCAT
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            39545 25 +     45743 AAAA---T-T---GCTTTG-AT-AA----T----TCATTCAT
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         7123 21 +     29742 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        18642 21 -    104932 AAAA---T-C---ACTTTG-AT-AA----T----T----CAT
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 I 4
s Mirza_zaza.k141_593947                                     6057 21 -     12809 AAAA---T-T---GCTTTG-AT-AA----C----T----CAT
i Mirza_zaza.k141_593947                                C 0 I 32
s Monodon_monoceros.MonMon_M_scaffold_5598                 151987 21 +    154973 AAAA---T-T---GCTCTG-AT-AA----T----T----CAT
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                165252 21 +    265003 AAAG---T-T---GCTTTG-AT-AA----T----T----CAT
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  8782 21 -     19904 AAAA---T-T---GCTTTG-AT-AA----T----T----CAT
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 I 4
s Mungos_mungo.MunMun_flattened_line_8729                  152122 21 -    168139 AAAA---T-C---ACTCTG-AC-AA----T----T----CGT
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          26079 21 -    100666 AAAA---T-T---GCTTTG-AT-AA----T----T----CAT
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70772974 21 +  92629107 AAAA---T-C---ACCACA-AT-TC----T----T----TAC
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75495026 21 +  98207768 AAAA---T-C---ACCAca-at-tc----t----t----tac
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67561778 20 +  89017189 AAAA---T-C---ACCATA-AT-AG----C----T----CA-
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74337749 21 +  97876770 AAAA---T-C---ACCaca-at-tc----t----t----tac
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             15802 13 +     98495 ---------------TTTG-TT-AA----T----T----CAT
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 5 I 2
s Mustela_putorius.JH417978.1                             4430399 21 -  28371801 AAAA---T-C---GCATTG-CT-AA----T----T----CAT
i Mustela_putorius.JH417978.1                           C 0 I 4
s Myocastor_coypus.MyoCoy_scaffold_3653                     96530 14 -    117718 AAAA---T-T---GCTTTG-AT--------------------
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 I 3
s Myotis_brandtii.KE161952.1                               973093 21 +   8389877 AAAA---T-T---GCTTTG-AT-AA----T----T----CAT
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5024171 21 +   6462685 AAAA---T-T---GCTTTG-AT-GA----T----T----CAT
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3470600 21 -   3747815 AAAA---T-T---GCTTTG-AT-AA----T----T----CAT
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        15827 21 +     66751 AAAA---T-T---GCTTTG-AT-AA----T----T----CAT
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_137280             8583 21 -      8794 AAAA---T-T---GTTTTG-AT-AA----T----T----TGT
i Myrmecophaga_tridactyla.MyrTri_scaffold_137280        C 0 N 0
s Nannospalax_galili.KL201303.1                            125456 21 +    362372 AAAA---T-T---GCTTTC-AT-AG----C----T----CAT
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                              11386 21 +     48152 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4492033 21 -  14209539 AAAA---T-C---ACTTTG-AT-AA----T----T----TAT
i Neomonachus_schauinslandi.NINY01007774.1              C 0 I 4
s Neophocaena_asiaeorientalis.KZ688543.1                  3956578 21 -   4490290 AAAA---T-T---GCTCTG-AT-AA----T----T----CAT
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  52567 21 +     94413 AACA---T-T---GCTTTG-AT-AA----T----T----CAT
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_762468                            1188 21 -      2755 AAAA---C-A---GCTTTG-AT-AA----T----T----CAC
i Nomascus_annamensis.k141_762468                       C 0 C 0
s Nomascus_concolor.k141_256540                              7798 21 -      8966 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Nomascus_concolor.k141_256540                         C 0 C 0
s Nomascus_gabriellae.k141_1400361                           1739 21 -      2203 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_718                            12486 21 +     17550 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Nomascus_siki_b.tarseq_718                        n 21 I 528
s Nomascus_siki_a.k141_421408                                  1653 21 +     16235 ACAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                39774 21 +   3668941 AAAA---T-T---GCTTTG-AT-AA----T----T----CAT
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 I 4
s Nycticebus_bengalensis.LG16                            65572952 21 -  95554990 AAAA---T-T---GTTTTA-GT-AA----C----T----CAT
i Nycticebus_bengalensis.LG16                           C 0 I 19
s Nycticebus_coucang.k141_6040852                             589 21 +      1868 AAAA---T-T---GTTTTA-GT-AA----C----T----CAT
i Nycticebus_coucang.k141_6040852                       C 0 I 19
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65681137 21 +  89412551 AAAA---T-T---GTTTTA-GT-AA----C----T----CAT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 I 19
s Ochotona_princeps.JH802095.1                            5000999 21 -  23139505 AAAA---T-T---GATTTA-At-aa----t----t----cat
i Ochotona_princeps.JH802095.1                          C 0 I 33
s Octodon_degus.JH651621.1                                3691869 14 +  10294119 AAAA---T-T---GCTTTG-AT--------------------
i Octodon_degus.JH651621.1                              C 0 I 7
s Odobenus_rosmarus.KB229369.1                             686732 21 -   3126709 aaaa---t-c---attttg-at-aA----T----T----CAT
i Odobenus_rosmarus.KB229369.1                          C 0 I 4
s Odocoileus_virginianus.KZ101650.1                       1085757 21 +   1425656 AAAA---T-T---GCTTGG-AT-AA----T----T----CAT
i Odocoileus_virginianus.KZ101650.1                     C 0 I 4
s Okapia_johnstoni.LVCL01S0017931.1                         43823 21 +     78940 AAAA---A-T---GCTCTG-AT-AA----T----T----CAT
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 I 28
s Ondatra_zibethicus.OndZib_scaffold_6821                  131526 11 +    145789 GAAA---T-C---ACTGT------------------------
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  44442 21 +     62360 AAAA---T-T---ACTGTG-AT-AG----C----T----CAC
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7230259 21 -   7562323 AAAA---T-T---GCTCTG-AT-AA----T----T----CAT
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              65101 11 -     66828 AAAA---T-C---ACTTT------------------------
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 I 22
s Oryctolagus_cuniculus.CM000803.1                      141884943 13 + 163896628 CAAA---t-t---gctttg-a---------------------
i Oryctolagus_cuniculus.CM000803.1                      C 0 I 32
s Otocyon_megalotis.JAEUCK010005121.1                      316911 21 -    505867 AAAA---T-T---GCTTTG-AT-AA----T----T----CAT
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 I 4
s Otolemur_crassicaudatus.k141_505435                        6080 19 -     53940 AAAA---T-T---G--TTA-AT-AA----C----T----CAT
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18014046 19 -  38779656 AAAA---T-T---G--TTA-AT-AA----C----T----CAT
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134085014 21 - 275406953 AAAA---T-T---GCTCGG-AT-AA----T----T----CAT
i Ovis_aries.CM001582.2                                 C 0 I 4
s Ovis_canadensis.OviCan_scaffold_6251                      86255 21 +    140051 AAAA---T-T---GCTCGG-AT-AA----T----T----CAT
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 I 4
s Pan_paniscus.CM003386.1                               127579465 21 - 205426864 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Pan_paniscus.CM003386.1                               C 0 I 108
s Pan_troglodytes.CM009241.2                            120156625 21 - 196562556 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Pan_troglodytes.CM009241.2                            C 0 I 108
s Panthera_onca.PanOnc_flattened_line_1615                  41677 21 +    295523 AAAA---T-C---ACTTTG-AT-AA----T----T----CAT
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3645493 21 +  18214204 AAAA---T-C---ACTTTG-AT-AA----T----T----CAT
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5035130 21 -   6340057 AAAA---T-C---ACTTTG-AT-AA----T----T----CAT
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1073887 21 -   1292953 AAAA---T-T---GCTCTG-AT-AA----T----T----CAT
i Pantholops_hodgsonii.KE114631.1                       C 0 I 4
s Papio_anubis.CM001492.2                               188161366 21 - 188283584 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              4456 21 +     25005 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47518738 21 +  47705337 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 72729 21 -    104429 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   11261 21 +     14967 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 7126 21 -      7628 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    123154 21 -    135482 AAAA---T-C---ACTTTG-AT-AA----T----T----CAT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          11744 21 -     23713 AAAA---T-T---GTTTTC-AT-AA----C----T----CAT
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           12895 21 +     61070 AAAA---T-T---GTTTTC-AT-AA----C----T----CAT
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       3202 21 +     49596 ATAA---T-T---GCTTTC-CT-AA----T----T----CAT
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 I 23
s Peromyscus_maniculatus.KI615458.1                       2840280 21 -   3366660 AAAA---T-C---ACTGTG-AT-AG----C----T----CAC
i Peromyscus_maniculatus.KI615458.1                     C 0 I 8
s Petromus_typicus.PetTyp_scaffold_33007                    17901 22 -     36578 ACAA---TTT---ACTTGG-ATAA-----T----A----AAT
i Petromus_typicus.PetTyp_scaffold_33007                C 0 I 13
s Phocoena_phocoena.PhoPho_flattened_line_53071              4719 21 +      8220 AAAA---T-T---GCTCTG-AT-AA----T----T----CAT
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Piliocolobus_badius.k141_1987485                           4924 21 -      5908 AAAA---T-A---GCTTTG-GT-AA----T----T----CAC
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       5543 21 -     17985 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            4910 21 +      7694 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26743393 21 +  26888534 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306           101330 21 +    112873 AAAA---T-T---GCTTTG-AT-AA----T----T----CAT
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 I 23
s Platanista_gangetica.PlaMin_flattened_line_72990          11201 17 +     21690 GAAA---T-T---GCTTTG-AT-AA----T------------
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 I 4
s Plecturocebus_bernhardi.k141_959214                       27035 21 +     44506 AAAA---T-A---CCTTTG-AT-AA----T----T----CAC
i Plecturocebus_bernhardi.k141_959214                   C 0 I 17
s Plecturocebus_brunneus.k141_498086                        27248 21 +     67491 AAAA---T-A---CCTTTG-AT-AA----T----T----CAC
i Plecturocebus_brunneus.k141_498086                    C 0 I 17
s Plecturocebus_caligatus.k141_2539816                      17487 21 -     98129 AAAA---T-A---CCTTTG-AT-AA----T----T----CAC
i Plecturocebus_caligatus.k141_2539816                  C 0 I 17
s Plecturocebus_cinerascens.k141_744510                     27088 21 +    147771 AAAA---T-A---CCTTTG-AT-AA----T----T----CAC
i Plecturocebus_cinerascens.k141_744510                 C 0 I 17
s Plecturocebus_cupreus.k141_1145860                         3723 21 -     43940 AAAA---T-A---CCTTTG-AT-AA----T----T----CAC
i Plecturocebus_cupreus.k141_1145860                    C 0 I 17
s Plecturocebus_dubius.k141_3565563                          7806 21 -     55515 AAAA---T-A---CCTTTG-AT-AA----T----T----CAC
i Plecturocebus_dubius.k141_3565563                     C 0 I 17
s Plecturocebus_grovesi.k141_242819                         27160 21 +    152463 AAAA---T-A---CCTTTG-AT-AA----T----T----CAC
i Plecturocebus_grovesi.k141_242819                     C 0 I 17
s Plecturocebus_hoffmannsi.k141_985533                       4968 21 -    119457 AAAA---T-A---CCTTTG-AT-AA----T----T----CAC
i Plecturocebus_hoffmannsi.k141_985533                  C 0 I 17
s Plecturocebus_miltoni.k141_841561                         16882 21 +    134592 AAAA---T-A---CCTTTG-AT-AA----T----T----CAC
i Plecturocebus_miltoni.k141_841561                     C 0 I 17
s Plecturocebus_moloch.k141_890597                          27470 21 -     75465 AAAA---T-A---CCTTTG-AT-AA----T----T----CAC
i Plecturocebus_moloch.k141_890597                      C 0 I 17
s Pongo_abelii.NDHI03003816.1                              192096 21 -    373494 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19812743 21 +  19899266 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               8668 21 -     15069 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              8783 21 +     14865 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                4898 25 -      9567 AAAA---T-C---GCTTCG-AT-AATATAT----T----CAG
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 I 35
s Prolemur_simus.MPIZ01000048.1                           6853696 21 +  12164890 AACA---T-T---GCTTTA-AT-AA----C----T----CAT
i Prolemur_simus.MPIZ01000048.1                         C 0 I 25
s Propithecus_coquerelli.NW_012147863.1                     22504 21 -     30946 NNNN---N-N---NNNNNN-NN-NN----N----N----NNN
i Propithecus_coquerelli.NW_012147863.1                 C 0 I 28
s Propithecus_coronatus.k141_1353159                         8800 21 +     11805 AAAA---T-T---GCTTTA-AT-AA----C----T----CAT
i Propithecus_coronatus.k141_1353159                    C 0 I 32
s Propithecus_diadema.k141_577245                           48134 21 +     52369 AAAA---T-T---GCTTTA-AT-AA----C----T----CAT
i Propithecus_diadema.k141_577245                       C 0 I 32
s Propithecus_edwardsi.k141_1317105                         40521 21 -     44753 AAAA---T-T---GCTTTA-AT-AA----C----T----CAT
i Propithecus_edwardsi.k141_1317105                     C 0 I 32
s Propithecus_perrieri.k141_7554                            22444 21 +     27322 AAAA---T-T---GCTTTA-AT-AA----C----T----CAT
i Propithecus_perrieri.k141_7554                        C 0 I 32
s Propithecus_tattersalli.k141_907138                       22089 21 -     53241 AAAA---T-T---GCTTTA-AT-AA----C----T----CAT
i Propithecus_tattersalli.k141_907138                   C 0 I 32
s Propithecus_verreauxi.k141_158021                         44352 21 -     48185 AAAA---T-T---GCTTTA-AT-AA----C----T----CAT
i Propithecus_verreauxi.k141_158021                     C 0 I 32
s Psammomys_obesus.NESX01026517.1                           40113 20 +     77221 AAAA---T-C---A-TGTG-AG-AG----A----T----CAC
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            7905 21 -     27784 AAAA---T-T---GCTTTG-AT-AA----T----T----CAT
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        252045 21 -    344369 AAAA---T-T---GTTTTG-CT-AA----T----T----CAT
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 I 4
s Pteropus_alecto.KB031157.1                             13248710 25 -  17261082 AAAA---T-T---GCTTTG-AT-AA----TTCATT----CAT
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             606660 25 -   3946241 AAAA---T-T---GCTTTG-AT-AA----TTCATT----CAT
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131541618 21 - 161321710 AAAA---T-C---ACTTTG-AT-CA----T----T----CAT
i Puma_concolor.QAVW01000427.1                          C 0 I 19
s Pygathrix_cinerea.k141_374971                             32774 21 +     56732 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6809271 21 +   6970761 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             8660 21 +     18040 ACAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                22602 21 +     68503 AAAA---T-T---GCTTGG-AT-AA----T----T----CAA
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 I 4
s Rattus_norvegicus.chr11                                13918720 21 +  90463843 AAAA---T-C---ACCATG-AT-CG----C----T----CAC
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1794537 25 +   2252614 AAAA---T-T---GCTTTG-AT-AA----TCCATT----CAT
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                            3039 21 -     17045 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206380526 21 - 206558726 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44859429 21 -  45163003 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                22055 25 +    109198 ATAA---T-T---GCTTTG-AT-AA----TTCATT----CAT
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                      3285 21 -      4338 AAAA---T-T---GCCCTG-AT-AA----T----T----CAT
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 I 4
s Saimiri_boliviensis.NW_024100938.1                     15677489 21 -  43202129 AAAA---T-A---CTTCTG-AT-AA----T----T----CAC
i Saimiri_boliviensis.NW_024100938.1                    C 0 I 20
s Saimiri_cassiquiarensis.k141_808270                        9403 21 +     34089 AAAA---T-A---CTTCTG-AT-AA----T----T----CAC
i Saimiri_cassiquiarensis.k141_808270                   C 0 I 20
s Saimiri_macrodon.k141_2087127                              9342 21 -     60842 AAAA---T-A---CTTCTG-AT-AA----T----T----CAC
i Saimiri_macrodon.k141_2087127                         C 0 I 20
s Saimiri_oerstedii.k141_841116                              9436 21 +     67014 AAAA---T-A---CTTCTG-AT-AA----T----T----CAC
i Saimiri_oerstedii.k141_841116                         C 0 I 20
s Saimiri_sciureus.k141_1947592                              9413 21 +     60816 AAAA---T-A---CTTCTG-AT-AA----T----T----CAC
i Saimiri_sciureus.k141_1947592                         C 0 I 20
s Saimiri_ustus.k141_1282476                                 9350 21 -     76454 AAAA---T-A---CTTCTG-AT-AA----T----T----CAC
i Saimiri_ustus.k141_1282476                            C 0 I 20
s Sapajus_apella.ctg10                                   17346120 15 -  30362882 -------------CCTTTG-AT-AA----T----T----CAC
i Sapajus_apella.ctg10                                  I 5 I 17
s Sapajus_macrocephalus.k141_966464                         25441 15 -     62485 -------------CCTTTG-AT-AA----T----T----CAC
i Sapajus_macrocephalus.k141_966464                     I 5 I 17
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   41334 21 -    114521 AAAA---T-C---CCTCTG-AT-AA----T----T----CAT
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 I 38
s Semnopithecus_entellus.k141_1572367                        6275 21 +     15331 AAAA---T-A---GCTTTG-AT-AA----T----C----CAC
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      11650 21 +     20762 AAAA---T-A---GCTTTG-AT-AA----T----C----CAC
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         121654 21 +    130994 AAAA---T-A---GCTTTG-AT-AA----T----C----CAC
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           40434 21 +     46263 AAAA---T-A---GCTTTG-AT-AA----T----C----CAC
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     33579 21 +     42640 AAAA---T-A---GCTTTG-AT-AA----T----C----CAC
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        16601 21 +     30600 AAAA---T-A---GCTTTG-AT-AA----T----C----CAC
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  106620 24 -    120886 AAAA---T-CATCAATGTG-AT-TG----T----T----CAC
i Sigmodon_hispidus.SigHis_scaffold_11332               I 27 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            25991 21 +    739146 AAAA---T-T---GCTCTG-AT-AA----T----T----CAT
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17776317 12 -  27805282 AAAA---A-T---GCACTA-----------------------
i Sorex_araneus.JH798170.1                              C 0 I 6
s Spermophilus_dauricus.KZ294190.1                        2244991 21 +   2842873 AAAA---T-C---ACTTTG-AT-AA----C----T----CAT
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             240822 21 -    276980 AAAA---T-C---ACTTTG-AT-AA----T----T----CAT
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 I 4
s Suricata_suricatta.SurSur_flattened_line_20339            35023 21 +     62062 AAAA---T-C---ACTCTG-AT-AA----T----T----CAT
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189277021 21 + 218635234 AAAA---T-T---GCTTTG-AT-AA----T----T----CAT
i Sus_scrofa.CM000824.4                                 C 0 I 4
s Symphalangus_syndactylus.tarseq_24                        19776 21 -  13920577 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                4164 25 +     20549 AAAA---G-T---GCTTTG-AT-AA----T----TCATTCAT
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               18257 21 +     45698 AAAA---T-T---GTTTTG-AT-AA----T----T----TGT
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 I 4
s Tapirus_indicus.TapInd_scaffold_176                      812611 21 +   1148477 AAAA---T-T---GCTTTG-AT-AA----T----T----CAT
i Tapirus_indicus.TapInd_scaffold_176                   C 0 I 4
s Tapirus_terrestris.TapTer_scaffold_14939                  63253 21 +     99546 AAAA---T-T---GCTTTG-AT-AA----T----T----CAT
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 I 4
s Theropithecus_gelada.CM009951.1                       194012899 21 - 194193292 AAAA---T-A---GCTTTG-AT-AA----T----T----CAC
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                  1441 21 -      3104 AAAA---T-T---GCTTTG-AT-AA----T----T----CAT
i Tolypeutes_matacus.TolMat_scaffold_475685             C 0 I 4
s Tonatia_saurophila.TonSau_scaffold_3334                  139911 21 -    259118 AAAA---T-T---GCTTTG-GT-AA----T----T----CAT
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        29922 21 +     38948 AAAA---T-A---GCTTTG-AT-AA----T----C----CAC
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   23482 21 -     32910 AAAA---T-A---GCTTTG-AT-AA----T----C----CAC
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      5383 21 -     12939 AAAA---T-A---GCTTTG-AT-AA----T----C----CAC
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       4811 21 -     14244 AAAA---T-A---GCTTTG-AT-AA----T----C----CAC
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           46204 21 -     54611 AAAA---T-A---GCTTTG-AT-AA----T----C----CAC
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        4005 21 -     11566 AAAA---T-A---GCTTTG-AT-AA----T----C----CAC
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     6189 21 -     15592 AAAA---T-A---GCTTTG-AT-AA----T----C----CAC
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          4841 21 +     14371 AAAA---T-A---GCTTTG-AT-AA----T----C----CAC
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   3127 21 +     12481 AAAA---T-A---GCTTTG-AT-AA----T----C----CAC
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        3108 21 -     24393 AAAA---T-A---GCTTTG-AT-AA----T----C----CAC
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       8252 21 -     28054 AAAA---T-A---GCTTTG-AT-AA----T----C----CAC
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44663036 21 -  44834318 AAAA---T-A---GCTTTG-AT-AA----T----C----CAC
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       5348 21 +     13828 AAAA---T-A---GCTTTG-AT-AA----T----C----CAC
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                  10770 21 +     90398 AAAA---T-T---GCTTTG-AT-AA----T----T----CAT
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 I 4
s Trichechus_manatus.JH594618.1                          16090785 25 +  31416278 AAAA---T-C---ACTTTG-AT-AACATAT----T----CAG
i Trichechus_manatus.JH594618.1                         C 0 I 20
s Tupaia_chinensis.KB320831.1                             2802040 21 -   3938065 AAAA---A-T---GCTTTG-AT-AA----T----T----CAT
i Tupaia_chinensis.KB320831.1                           C 0 I 18
s Tupaia_tana.TupTan_flattened_line_68454                   10868 21 +     13056 AAAA---T-T---GCTTTG-AT-AA----T----T----CAT
i Tupaia_tana.TupTan_flattened_line_68454               C 0 I 18
s Tursiops_truncatus.MRVK01000923.1                      69318989 21 -  96451834 AAAA---T-T---GCTCTG-AT-AA----T----T----CAT
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                    1726 21 +    136657 ACAA---T-T---GCTCTG-AT-AA----T----T----CAT
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 C 0
s Ursus_maritimus.KK498671.1                              6522470 21 +  28682327 AAAA---T-C---GCTTTG-CT-AA----T----T----CAT
i Ursus_maritimus.KK498671.1                            C 0 I 4
s Varecia_rubra.k141_432109                                 10365 21 -     20643 AACA---T-T---GCTTTA-AT-AA----C----T----CAT
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             29900 21 -     33872 AACA---T-T---GCTTTA-AT-AA----C----T----CAT
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1530016 21 -   2331223 AAAA---T-T---GCTTTG-AT-AA----T----T----CAT
i Vicugna_pacos.KN269600.1                              C 0 I 4
s Vulpes_lagopus.VulLag_flattened_line_2045                146138 21 -    281493 AAAA---T-T---GCTTTG-AT-AA----T----T----CAT
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 I 4
s Xerus_inauris.XerIna_scaffold_7898                       132487 21 -    134049 AAAA---T-C---GCTTTG-AT-AA----T----T----CAT
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        221593 21 -    227762 AAAA---T-C---ATTTTG-AT-AA----T----T----CAT
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 I 4
s Zapus_hudsonius.ZapHud_scaffold_202118                     2151 22 -      3360 AAAA---T-T---ACTTTG-ACCAA----T----T----CAT
i Zapus_hudsonius.ZapHud_scaffold_202118                C 0 I 11
s Ziphius_cavirostris.ZipCav_flattened_line_60625            3574 17 -     13665 AAAA---T-T---GCTTTG-AT-AG----T------------
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 I 8
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Hylobates_pileatus_a.tarseq_592                             37267 2881 -     60944 I
e Tarsius_wallacei.k141_48636                               64696  0 +     65473 C
e Tarsius_lariang.k141_609102                               31387  0 +     42269 C
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Cephalopachus_bancanus.k141_702587                        12545  0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530  0 +    345090 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               18510 78 +    209709 TCA-TTA----CATTC-TT--TCC-TAA----C-TAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTTGATA----TGCTGTG-CTT-TTGCATTAATAATT-CT-C
s Acinonyx_jubatus.LLWD01000356.1                         2041284 51 +   3721120 -----TA----TGTTC-TT--CCC-AAG----T-GAaac----t-at--------tta--tg--ttttaa-a-at-t----------t-atagata----TGCA---------------------------
i Acinonyx_jubatus.LLWD01000356.1                       C 0 I 12
s Acomys_cahirinus.AcoCah_scaffold_1625                    118982 78 -    189883 TGA-GTA----TATTC-TT--CCC-AAA----C-TAGAC----A-GT--------TTA--TG--TCTTCA-A-CA-T----------T-ATG----CATGTTCTATG-TTT-TACTGCCAATAATT-AC-A
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10665228 51 +  23371972 -----TT----TGTTC-TT--TCC-AAG----T-GAAGC----T-AT--------TTA--TA--TTCTAA-a-ct-t----------t-atagata----tata---------------------------
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 4 I 12
s Ailurus_fulgens.LNAC01000003.1                          7102176 51 -  16596857 -----TA----TGTTC-TT--TCC-AAG----T-GAAGC----t-at--------tta--ta--ttctaa-a-ct-t----------t-atagata----taca---------------------------
i Ailurus_fulgens.LNAC01000003.1                        I 4 I 12
s Allactaga_bullata.AllBul_scaffold_141108                   2353 39 -      7259 TCA-GCA----CATTC-TT--TCC-AAA----C-TAGAT----A-AT--------TTA--TA--TCT-GA-C-----------------------------------------------------------
i Allactaga_bullata.AllBul_scaffold_141108              C 0 I 37
s Allenopithecus_nigroviridis.k141_2469532                   6397 77 -     60446 TCA-TTA----CATTC-TT--TCC-AAA----T-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCGATA----TGTTATG-CTT-TT-CATTAATAATT-CT-C
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         7111 77 -     29318 TCA-TTA----CATTC-TT--TCC-AAA----T-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GCCGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-C
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         6049 77 +     38766 TCA-TTA----CATTC-TT--TCC-AAA----T-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-C
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          7007 77 -     80423 TCA-TTA----CATTC-TT--TCC-AAA----T-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GCCGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-C
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              1976 56 +     19852 ------------------------------------AAC----T-AT--------TTA--TA--TAATAA-G-CT-T----------T-GTCAAGA----TGCTAAG-CTT-TTACATTAATAATT-CT-C
i Alouatta_belzebul.k141_276091                         I 17 C 0
s Alouatta_caraya.k141_664908                                4199 53 -     12443 ------------------------------------AAC----T-AT--------TTA--TA--TAA----G-CT-T----------T-GTCAAGA----TGCTATG-CTT-TTACATTAATAATT-CT-C
i Alouatta_caraya.k141_664908                           I 17 C 0
s Alouatta_discolor.k141_2023149                             1519 56 +      5070 ------------------------------------AAC----T-AT--------TTA--TA--TAATAA-G-CT-T----------T-GTCAAGA----TGCTAAG-CTT-TTACATTAATAATT-CT-C
i Alouatta_discolor.k141_2023149                        I 17 C 0
s Alouatta_juara.k141_799181                                 1266 56 -      1641 ------------------------------------AAC----T-AT--------TTA--TA--TAATAA-G-CT-T----------T-GTCAAGA----TGCTATG-CTT-TTACATTAATAATT-CT-C
i Alouatta_juara.k141_799181                            I 17 C 0
s Alouatta_macconnelli.k141_2318944                          4005 56 -     24210 ------------------------------------AAC----T-AT--------TTA--TA--TAATAA-G-CT-T----------T-GTCAAGA----TGCTATG-CTT-TTACATTAATAATT-CT-C
i Alouatta_macconnelli.k141_2318944                     I 17 C 0
s Alouatta_nigerrima.k141_494922                              509 56 -      8325 ------------------------------------AAC----T-AT--------TTA--TA--TAATAA-G-CT-T----------T-GTCAAGA----TGCTATG-CTT-TTACATTAATAATT-CT-C
i Alouatta_nigerrima.k141_494922                        I 17 C 0
s Alouatta_palliata.k141_405616                              6423 56 +     16794 ------------------------------------AAC----T-AT--------TTA--TA--TAATAA-G-CT-T----------T-GTCAAGA----TGCTATG-CTT-TTACATTAATAATT-CT-C
i Alouatta_palliata.k141_405616                         I 17 C 0
s Alouatta_puruensis.k141_347198                              452 56 +      9111 ------------------------------------AAC----T-AT--------TTA--TA--TAATAA-G-CT-T----------T-GTCAAGA----TGCTATG-CTT-TTACATTAATAATT-CT-C
i Alouatta_puruensis.k141_347198                        I 17 C 0
s Alouatta_seniculus.k141_790278                             5700 56 -      9835 ------------------------------------AAC----T-AT--------TTA--TA--TAATAA-G-CT-T----------T-GTCAAGA----TGCTATG-CTT-TTACATTAATAATT-CT-C
i Alouatta_seniculus.k141_790278                        I 17 C 0
s Ammotragus_lervia.NIVO01013474.1                        3528433 70 +   4113121 -----TA----TGTTC-TCTGTCC-AAG----T-GAAAC----T-AT--------TTA--TA--CTCTAA-A-CT-T----------T-A----------TGCGATG-CTT-TTATGTTAATAATT-AC-A
i Ammotragus_lervia.NIVO01013474.1                      I 4 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      394517 70 -    631301 -----TA----TGTTC-TT--TCA-AAG----T-GAAAC----T-AT--------ATA--TA--TTTTAC-A-TT-T----------T-ATAGCTA----TGCTATG-CTT-TGGCATTAATAAT------
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             5596 70 +     55446 -----TA----TGTTC-TTTGTCC-AAG----T-GAAAC----T-AT--------TTA--TA--CTCTAA-A-CT-T----------T-A----------TGCTATG-CTT-TTACATTAATAATT-AC-A
i Antilocapra_americana.AntAmePen_scaffold_27338        I 4 C 0
s Aotus_azarae.k141_3170768                                 67309 56 +     78111 ------------------------------------AAC----T-AT--------TTA--TA--TTATAA-A-CT-T----------T-GTCAAGA----TGCTATG-CTT-TTGCATTAATAATT-CT-C
i Aotus_azarae.k141_3170768                             I 17 C 0
s Aotus_griseimembra.k141_3275623                           10253 56 +     22701 ------------------------------------AAC----T-AT--------TTA--TA--TTATAA-A-CT-T----------T-GTCAAGA----TGCTATG-CTT-TTGCATTAATAATT-CT-C
i Aotus_griseimembra.k141_3275623                       I 17 C 0
s Aotus_nancymaae.KZ196176.1                              5754220 56 +   9889416 ------------------------------------AAC----T-AT--------TTA--TA--TTATAA-A-CT-T----------T-GTCAAGA----TGCTATG-CTT-TTGCATTAATAATT-CT-C
i Aotus_nancymaae.KZ196176.1                            I 17 C 0
s Aotus_trivirgatus.k141_1740727                            10797 56 -    104377 ------------------------------------AAC----T-AT--------TTA--TA--TTATAA-A-CT-T----------T-GTCAAGA----TGCTATA-CTT-TTGCATTAATAATT-CT-C
i Aotus_trivirgatus.k141_1740727                        I 17 C 0
s Aotus_vociferans.k141_718647                              10826 56 +     23246 ------------------------------------AAC----T-AT--------TTA--TA--TTATAA-A-CT-T----------T-GTCAAGA----TGCTATA-CTT-TTGCATTAATAATT-CT-C
i Aotus_vociferans.k141_718647                          I 17 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     3478 40 +     11424 ----------------------------------------------T--------TTA--TA--TTTTAA-A-CT-T----------T-ATAGATA----T--GCTA-CCT----------TAATT-AT-G
i Aplodontia_rufa.AprRuf_scaffold_101456                I 20 C 0
s Arctocebus_calabarensis.k141_587554                        7383 72 +      9265 TCA-GCA----CATTC-TT--TCC-ATA----C-TAAAC----T-AT--------TTG--TA--TTATAA-A-CT-T----------T-ATTGATA----TGCTAAG-CTT-TTGAATTAATA--------
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                12809 68 -     29036 ------A----TATTC-TT--TCA-AAG----T-GAAAA----T-AT--------ATA--TA--T-TTAC-A-TT-T----------T-ATAGCTA----TGCTATG-CTT-TAGTGTTAATAAT------
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9544110 56 +  39197703 ------------------------------------AAC----T-AT--------TTA--TA--TAATAA-G-CT-T----------T-GTCAAGA----TGCTATG-CTT-TTGCATTAATAATT-CT-C
i Ateles_geoffroyi_b.tarseq_2582                           I 17 C 0
s Ateles_belzebuth.k141_1348307                             65384 56 +     85812 ------------------------------------AAC----T-AT--------TTA--TA--TAATAA-G-CT-T----------T-GTCAAGA----TGCTATG-CTT-TTGCATTAATAATT-CT-C
i Ateles_belzebuth.k141_1348307                         I 17 C 0
s Ateles_chamek.k141_1072810                                16397 53 +     89302 ------------------------------------AAC----T-AT--------TTA--TA--TAATAA-G-CT-T----------T-GTCAAGA----TGCTATG-CTT-TTGCATTAAT---T-CT-C
i Ateles_chamek.k141_1072810                            I 17 C 0
s Ateles_geoffroyi_a.k141_1300742                             20898 56 -     58268 ------------------------------------AAC----T-AT--------TTA--TA--TAATAA-G-CT-T----------T-GTCAAGA----TGCTATG-CTT-TTGCATTAATAATT-CT-C
i Ateles_geoffroyi_a.k141_1300742                         I 17 C 0
s Ateles_marginatus.k141_899112                             68892 56 +    119057 ------------------------------------AAC----T-AT--------TTA--TA--TAATAA-G-CT-T----------T-GTCAAGA----TGCTATG-CTT-TTGCATTAATAATT-CT-C
i Ateles_marginatus.k141_899112                         I 17 C 0
s Ateles_paniscus.k141_1631200                              10861 56 -     25888 ------------------------------------AAC----T-AT--------TTA--TA--TAATAA-G-CT-T----------T-GTCAAGA----TGCTATG-CTT-TTGCATTAATAATT-CT-C
i Ateles_paniscus.k141_1631200                          I 17 C 0
s Avahi_laniger.k141_2840928                                11945 46 -     16375 -------------------------------------------------------------A--TTATAA-A-CT-T----------T-ATTGATA----TGCTATG-CTT-TTGAATTAATAATT-AT-A
i Avahi_laniger.k141_2840928                            I 32 C 0
s Avahi_peyrierasi.k141_798820                               5561 46 +      6337 -------------------------------------------------------------A--TTATAA-A-CT-T----------T-ATTGATA----TGCTATG-CTT-TTGAATTAATAATT-AT-A
i Avahi_peyrierasi.k141_798820                          I 32 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26385823 70 +  51448160 -----TA----TGTTC-TTCGTCC-AAG----T-GAAAc----t-at--------tta--ta--ttctaa-a-tt-t----------t-a----------tgctatg-ttt-ttacattaataatt-at-a
i Balaenoptera_acutorostrata.KI537095.1                 I 4 C 0
s Balaenoptera_bonaerensis.DF502048.1                       10996 70 -     13118 -----TA----TGCTC-TTCGTCC-AAG----T-GAAAc----t-at--------tta--ta--ttctaa-a-tt-t----------t-a----------tgctatg-ttt-ttacattaataatt-at-a
i Balaenoptera_bonaerensis.DF502048.1                   I 4 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   50405 58 -     72089 -----TA----TGTTC-TTTGTCC-AAG----T-GAAAC----T-AT--------TCA--TA--CTCTAA-A-CT-T----------T-A----------TGCTATG-CTT-TTATG--------------
i Beatragus_hunteri.BeaHun_scaffold_21644               I 4 C 0
s Bison_bison.KN264915.1                                   305353 70 -   6870073 -----TA----TGTTC-TTTGTCC-AAC----T-GAAAC----T-AT--------TTG--TA--CTCTAA-A-CT-T----------T-A----------TACTATG-CTT-TTATGTTAATAATT-AC-A
i Bison_bison.KN264915.1                                I 4 C 0
s Bos_indicus.CM003021.1                                 22959459 70 + 161108492 -----TA----TGTTC-TTTGTCC-AAC----T-GAAAC----T-AT--------TTG--TA--CTCTAA-A-CT-T----------T-A----------TANTATG-CTT-TTATGTTAATAATT-AC-A
i Bos_indicus.CM003021.1                                I 4 C 0
s Bos_mutus.JH883513.1                                     421638 70 +    998990 -----TA----TGTTC-TTTGTCC-AAC----T-GAAAC----T-AT--------TTG--TA--CTCTAA-A-CT-T----------T-A----------TACTATG-CTT-TTATGTTAATAATT-AC-A
i Bos_mutus.JH883513.1                                  I 4 C 0
s Bos_taurus.CM000177.6                                  22668111 70 + 158972876 -----TA----TGTTC-TTTGTCC-AAC----T-GAAAC----T-AT--------TTG--TA--CTCTAA-A-CT-T----------T-A----------TATTATG-CTT-TTATGTTAATAATT-AC-A
i Bos_taurus.CM000177.6                                 I 4 C 0
s Bubalus_bubalis.KI419065.1                               676949 70 +   1914593 -----TA----TGTTC-TTTGTCC-AAC----T-GAAAT----T-AT--------TTG--TA--CTCTAA-A-CT-T----------T-A----------TACTATG-CTT-TTATGTTAATAATT-AC-A
i Bubalus_bubalis.KI419065.1                            I 4 C 0
s Cacajao_ayresi.k141_724503                               118730 56 -    171031 ------------------------------------AAC----T-AT--------TTA--TA--TTATAA-A-CT-T----------T-GTCAAGA----CGCTATG-CTT-TTGCATTAATAATT-CT-C
i Cacajao_ayresi.k141_724503                            I 17 C 0
s Cacajao_calvus.k141_96166                                 17750 56 +    125063 ------------------------------------AAC----T-AT--------TTA--TA--TTATAA-A-CT-T----------T-GTCAAGA----CGCTATG-CTT-TTGCATTAATAATT-CT-C
i Cacajao_calvus.k141_96166                             I 17 C 0
s Cacajao_hosomi.k141_303789                                19797 56 -    216513 ------------------------------------AAC----T-AT--------TTA--TA--TTATAA-A-CT-T----------T-GTCAAGA----CGCTATG-CTT-TTGCATTAATAATT-CT-C
i Cacajao_hosomi.k141_303789                            I 17 C 0
s Cacajao_melanocephalus.k141_1160263                       12340 56 -    134917 ------------------------------------AAC----T-AT--------TTA--TA--TTATAA-A-CT-T----------T-GTCAAGA----CGCTATG-CTT-TTGCATTAATAATT-CT-C
i Cacajao_melanocephalus.k141_1160263                   I 17 C 0
s Camelus_bactrianus.KN276303.1                           3224933 68 -   8989139 -----TA----TGTTC-TT--TCC-AAG----T-GAAAC----T-AT--------TTA--TA--TTCTCA-A-CT-T----------T-A----------TGCTATG-CTT-TTGCATTAATAATT-AT-A
i Camelus_bactrianus.KN276303.1                         I 4 C 0
s Camelus_dromedarius.KN271192.1                           402633 68 -  15254737 -----TA----TGTTC-TT--TCC-AAG----T-GAAAC----T-AT--------TTA--TA--TTCTCA-A-CT-T----------T-A----------TGCTATG-CTT-TTGCattaataatt-at-a
i Camelus_dromedarius.KN271192.1                        I 4 C 0
s Camelus_ferus.KB016973.1                                2978371 68 +   6889770 -----TA----TGTTC-TT--TCC-AAG----T-GAAAC----T-AT--------TTA--TA--TTCTCA-A-CT-T----------T-A----------TGCTGTG-CTT-TTGCattaataatt-at-a
i Camelus_ferus.KB016973.1                              I 4 C 0
s CanFam4.chr31                                          11528079 51 +  39901454 -----TA----TCTTC-TT--TCC-AAG----T-GAAGC----T-AT--------TTA--TA--TTCTTA-A-TT-T----------T-ATAGACA----TACA---------------------------
i CanFam4.chr31                                         I 4 I 12
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   23053 51 +     87036 -----TA----TCTTC-TT--TCC-AAG----T-GAAGC----T-AT--------TTA--TA--TTCTTA-A-TT-T----------T-ATAGACA----TACA---------------------------
i Canis_lupus_VD.CanFam_VD_scaffold_16982               I 4 I 12
s Canis_lupus_dingo.QKWQ01001993.1                       11274976 51 -  35597290 -----TA----TCTTC-TT--TCC-AAG----T-GAAgc----t-at--------tta--ta--ttctta-a-tt-t----------t-atagaca----taca---------------------------
i Canis_lupus_dingo.QKWQ01001993.1                      I 4 I 12
s Canis_lupus_familiaris.chr31                           11097473 51 +  39895921 -----TA----TCTTC-TT--TCC-AAG----T-GAAgc----t-at--------tta--ta--ttctta-a-tt-t----------t-atagaca----taca---------------------------
i Canis_lupus_familiaris.chr31                          I 4 I 12
s Canis_lupus_orion.HG994411.1                           16464258 51 -  44759192 -----TA----TCTTC-TT--TCC-AAG----T-GAAGc----t-at--------tta--ta--ttctta-a-tt-t----------t-atagaca----taca---------------------------
i Canis_lupus_orion.HG994411.1                          I 4 I 12
s Capra_aegagrus.CM003214.1                              21335866 70 + 157394656 -----TA----TGTTC-TCTGTCC-AAG----T-GAAAC----T-AT--------TTA--TA--CTCTAA-A-CT-T----------T-A----------TGCGATG-CTT-TTATGTTAATAATT-AC-A
i Capra_aegagrus.CM003214.1                             I 4 C 0
s Capra_hircus.CM004562.1                               135714219 70 - 157403528 -----TA----TGTTC-TCTGTCC-AAG----T-GAAAC----T-AT--------TTA--TA--CTCTAA-A-CT-T----------T-A----------TGCGATG-CTT-TTATGTTAATAATT-AC-A
i Capra_hircus.CM004562.1                               I 4 C 0
s Capromys_pilorides.CapPil_scaffold_780116                   444 78 +      1571 TCA-ACA----CATTA-CT--TTC-AAA----C-TAAAC----T-AT--------TTA--TA--GCTTAA-G-TT-T----------T-ACAGATA----TGCTATG-TCT-TTGCATTAATAATT-GT-A
i Capromys_pilorides.CapPil_scaffold_780116             I 3 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               63803 70 +     67245 -----TA----TGTTC-TT--TCA-AAG----T-GAAAC----T-AT--------ATA--TA--TTTTAC-A-TT-T----------T-ATAGCTA----TGCTATG-CTT-TGGCATTAATAAT------
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_1326                      923 78 -    202837 TCA-GCA----CAGTC-TT--TCC-AAA----G-TAAAC----T-AT--------TTA--TG--TTCTAA-A-CT-T----------T-ATAGATG----TATTGTA-TTT-TTGCTTTAATAGTG-AT-A
i Castor_canadensis.CasCan_scaffold_1326                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   164673 67 -    276539 ------G----TGTTC-AT--TCC-AAG----T-GAAAC----T-AT--------TTT--TG--TTCTAG-A-CT-T----------T-A----------TGCTATG-CTT-TTACATAAATAATT-AT-A
i Catagonus_wagneri.CatWag_scaffold_1305                I 1 C 0
s Cavia_aperea.AVPZ01000278.1                            15790607 74 -  24422027 TAA-GCA----TATta-ct--ttc-aaa----t-taaat----t-at--------tta--ta--gtcTAA-A-TT-T----------T-ATAGATA----TAGTATG-TTT-TTGCATTAATAAT------
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15802546 78 -  24440124 TAA-GCA----TATTA-ct--ttc-aaa----t-taaat----t-at--------tta--ta--gtcTAA-A-TT-T----------T-ATAGATA----TAGTATG-TTT-Ttgcattaataatt-at-a
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       180718 78 +    436027 TAA-GCA----TATTA-CT--TTC-AAA----T-TAAAT----T-AT--------TTA--TA--GTCTAA-A-TT-T----------T-ATAGATA----TAGTATG-TTT-TTGCATTAATAATT-AT-A
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18896464 56 -  29618158 ------------------------------------AAC----T-AT--------TTA--TA--TTATAA-A-CT-T----------T-GTCAAGA----TGCTATG-CTT-TTGCATTAATAATT-CT-C
i Cebus_albifrons.Contig22                              I 17 C 0
s Cebus_olivaceus.k141_93739                                13114 56 -     26817 ------------------------------------AAC----T-AT--------TTA--TA--TTATAA-A-CT-T----------T-GTCAAGA----TGCTATG-CTT-TTGCATTAATAATT-CT-C
i Cebus_olivaceus.k141_93739                            I 17 C 0
s Cebus_unicolor.k141_239009                                17358 56 +     25043 ------------------------------------AAC----T-AT--------TTA--TA--TTATAA-A-CT-T----------T-GTCAAGA----TGCTATG-CTT-TTGCATTAATAATT-CT-C
i Cebus_unicolor.k141_239009                            I 17 C 0
s Ceratotherium_simum.JH767818.1                          4369903 71 +   7569818 -----TA----TGTTC-TT--TCC-aag----c-aaaat----t-at--------tta--ta--ttctaa-a-CT-T----------T-ATAGATA----TGCTTTC-CTT-CTgcatta---att-at-a
i Ceratotherium_simum.JH767818.1                        I 4 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_171732           60 71 +      8380 -----TA----TGTTC-TT--TCC-AAG----C-AAAAT----T-AT--------TTA--TA--TTCTAA-A-CT-T----------T-ATAGATA----TGCTTTC-CTT-CTGCATTA---ATT-AT-A
i Ceratotherium_simum_cottoni.CerCot_scaffold_171732    I 4 C 0
s Cercocebus_atys.KQ010443.1                              6560337 77 +   6739814 TCA-TTA----CATTC-TT--TCC-AAA----C-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-C
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      31814 77 +     60454 TCA-TTA----CATTC-TT--TCC-AAA----C-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-C
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          7018 77 -     21101 TCA-TTA----CATTC-TT--TCC-AAA----C-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-C
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         64328 77 -    107033 TCA-TTA----CATTC-TT--TCC-AAA----C-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCGATA----TGCTATG-CTT-TT-CATTAACAATT-CT-C
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        7188 77 -     17608 TCA-TTA----CATTC-TT--TCC-AAA----T-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-C
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          4356 77 +     45019 TCA-TTA----CATTC-TT--TCC-AAA----T-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-C
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           4632 77 +     15177 TCA-TTA----CATTC-TT--TCC-AAA----T-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-C
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          7238 77 +     16677 TCA-TTA----CATTC-TT--TCC-AAA----T-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-C
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           29434 77 +     35983 TCA-TTA----CATTC-TT--TCC-AAA----T-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-C
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11995959 77 +  12117833 TCA-TTA----CATTC-TT--TCC-AAA----T-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-C
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46482941 77 +  46592721 TCA-TTA----CATTC-TT--TCC-AAA----T-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-C
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                       1052 77 -     27215 TCA-TTA----CATTC-TT--TCC-AAA----T-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-C
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       7252 77 +     35577 TCA-TTA----CATTC-TT--TCC-AAA----T-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-C
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        7046 77 -     25661 TCA-TTA----CATTC-TT--TCC-AAA----T-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCAATA----TGCTATG-CTT-TT-CATTAATAATT-CT-C
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        7218 77 -     17744 TCA-TTA----CATTC-TT--TCC-AAA----T-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-C
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        26587 77 +     37128 TCA-TTA----CATTC-TT--TCC-AAA----T-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-C
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           5617 72 -      6963 -----CA----CATTC-TT--CCC--AA----C-TAAAC----T-AT--------TTA--TA--TTATAA-A-CT-T----------T-ATAGATA----TTCTATT-CTT-TTGCATTAATAATG--T-A
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      I 4 C 0
s Cheirogaleus_major.k141_1157592                           64161 46 -     68416 -------------------------------------------------------------A--TTATAA-A-CG-T----------T-ATTGATA----TACTATG-CTT-TTGAATTAATAATT-AG-A
i Cheirogaleus_major.k141_1157592                       I 32 C 0
s Cheirogaleus_medius.k141_854352                             463 46 +     27737 -------------------------------------------------------------A--TTATAA-A-CT-T----------T-ATTGATA----TACTATG-CTT-TTGAATTAATAATT-AG-A
i Cheirogaleus_medius.k141_854352                       I 32 C 0
s Cheracebus_lucifer.k141_619653                            10421 56 -     18223 ------------------------------------AAC----T-AT--------TTA--TA--TTATAA-A-CT-T----------T-ATCAAGA----CGCTATG-CTT-TTGCATTTATAATT-CT-C
i Cheracebus_lucifer.k141_619653                        I 17 C 0
s Cheracebus_lugens.k141_996499                              2162 56 +    188999 ------------------------------------AAC----T-AT--------TTA--TA--TTATAA-A-CT-T----------T-ATCAAGA----CGCTACG-CTT-TTGCATTCATAATT-CT-C
i Cheracebus_lugens.k141_996499                         I 17 C 0
s Cheracebus_regulus.k141_2128895                           46461 56 +     57117 ------------------------------------AAC----T-AT--------TTA--TA--TTATAA-A-CT-T----------T-ATCAAGA----CGCTATG-CTT-TTGCATTCATAATT-CT-C
i Cheracebus_regulus.k141_2128895                       I 17 C 0
s Cheracebus_torquatus.k141_315545                          51141 56 +     54541 ------------------------------------AAC----T-AT--------TTA--TA--TTATAA-A-CT-T----------T-ATCAAGA----CGCTATG-CTT-TTGCATTCATAATT-CT-C
i Cheracebus_torquatus.k141_315545                      I 17 C 0
s Chinchilla_lanigera.JH721867.1                         15965315 54 +  43084221 --------------------------------------C----G-AT--------TTA--TA--GTCTAA-A-TT-T----------T-ATAGATA----TGCTATG-TTT-TTGcatttataatt-at-a
i Chinchilla_lanigera.JH721867.1                        I 20 C 0
s Chiropotes_israelita.k141_1189915                         75942 56 +    196370 ------------------------------------AAC----C-AT--------TTA--TA--TTATAA-A-TT-T----------T-GTCAAGA----CGCTATG-CTT-TTGCATTAATAATT-CT-C
i Chiropotes_israelita.k141_1189915                     I 17 C 0
s Chiropotes_sagulatus.k141_773804                          20123 56 +     40510 ------------------------------------AAC----C-AT--------TTA--TA--TTATAA-A-TT-T----------T-GTCAAGA----CGCTATG-CTT-TTGCATTAATAATT-CT-C
i Chiropotes_sagulatus.k141_773804                      I 17 C 0
s Chlorocebus_aethiops.ctg22                             15144772 77 -  15256731 TCA-TTA----CATTC-TT--TCC-AAA----T-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCAATA----TGCTATG-CTT-TT-CATTAATAATT-CT-C
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      39236 77 -     53260 TCA-TTA----CATTC-TT--TCC-AAA----T-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCAATA----TGCTATG-CTT-TT-CATTAATAATT-CT-C
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101149795 77 + 101219884 TCA-TTA----CATTC-TT--TCC-AAA----T-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCAATA----TGCTATG-CTT-TT-CATTAATAATT-CT-C
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                19639 73 -     21363 -----CA----CACTC-TT--TCC-AAA----C-TAAAC----T-AT--------TTA--TA--TTATAA-A-CT-T----------T-ATAGATA----TTCTATC-CTT-TTGCATTAATAATT--T-A
i Choloepus_didactylus.ChoDid_scaffold_36182            I 4 C 0
s Choloepus_hoffmanni.KN194586.1                           764943 73 +    964067 -----CA----CACTC-TT--TCC-AAA----C-TAAAC----T-AT--------TTA--TA--TTATAA-A-CT-T----------T-ATAGATA----TTCTATC-CTT-TTGCATTAATAATT--T-A
i Choloepus_hoffmanni.KN194586.1                        I 4 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_304221               238 54 -      7053 --------------------------------------C----T-AG--------TTA--CA--TTTTCA-A-CT-T----------T-ATTGATA----TACTATG-C-CTTTGCATTAATAATT-AT-A
i Chrysochloris_asiatica.ChrAsi_scaffold_304221         I 16 C 0
s Colobus_angolensis.KN985967.1                          10889567 77 +  10971483 TCA-TTA----CATTC-TT--TCC-AAA----T-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-C
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147667495 77 + 156195979 TCA-TTA----CATTC-TT--TCC-AAA----T-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-C
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            19478 77 +     23629 TCA-TTA----CATTC-TT--TCC-AAA----T-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-C
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60623966 34 +  78930452 ---------------------------------------------------------------------------------------T-GTAGAAA----TGCTATG-CCT-TTGCATTAATA-TT-AT-A
i Condylura_cristata.JH655880.1                         I 38 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         4314 74 -      5782 -----TA----TGGTC-TT--TCC-AAA----T-GAAAC----T-AT--------TTA--TA--TTCTAA-A-TT-T----------T-ATAGAGA----TGCTTGG-CTT-TTGCATTAATAATT-AT-A
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 283891 74 -    399297 TGA-GCA----CATTC-TT--TCC-AAA----G-TAAAC----A-AT--------TTA--TA--TTTTAA-A-CA-C----------T-ATA--------GTCTATG-TTT-TGTTGTTAAGAATC-AT-A
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53036212 71 +  72327488 TGA-GCA----CATCC-CT--TCA-AAA----C-TAGac----a-at--------gta--ta--ttttaa-a-ca-t----------t-ata--------ttCTGTG-TT----TTGTCAATACTT-AC-A
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              3847 28 -     22648 -----------------------------------------------------------------------------------------------A----TGCTCTG-CTT-TTGCATTAATAATT-AT-A
i Crocidura_indochinensis.CroInd_scaffold_27484         I 26 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            59297 51 -     70449 -----TA----TGTTC-TT--TCC-AAG----T-GAAAC----T-AT--------TTA--TA--TTATAA-A-CT-T----------T-ATAGATA----TACA---------------------------
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 I 12
s Ctenodactylus_gundi.CteGun_scaffold_447                  216034 78 -    956709 TCA-GCA----CATTC-TT--TCC-AAA----C-TAAAC----T-AT--------TTA--TG--CTCTGA-A-GTTT----------T-ATAGATA----TGCTATA-TT--TTGCATTAATAATC-AT-A
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 I 11
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 36812 78 -     67205 TCA-ACA----CATTA-CT--TTC-AAA----C-TAAAC----T-AC--------TTA--TA--GCTTAA-G-TT-T----------T-GCAGATA----CGCTATG-TTT-CTGCATTAATAATT-GT-A
i Ctenomys_sociabilis.CteSoc_scaffold_19489             I 4 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                21827 47 +     26546 ---------------------------------------------------------A--TA--GTTTAA-A-TT-G----------T-ATAGATA----TGCTATG-TT--TTGCATTAATAATT-GT-A
i Cuniculus_paca.CunPac_flattened_line_16637            I 26 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             62944 78 -    236241 CCA-GCA----CATTA-CT--TTC-AAA----C-TAAAC----T-AT--------TTG--TA--GTCTAA-A-TT-T----------T-ATAGATA----TGCTATA-TTT-TTGCATTAATAATT-GT-A
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          186661 72 -   6883506 -----CA----CATTC-TT--CCC--AA----C-TAAAC----T-AT--------TTA--TA--TTATAA-A-CT-T----------T-ATAGATA----TTCTATT-CTT-TTGCATTAATAATT--T-A
i Dasypus_novemcinctus.JH568778.1                       I 4 C 0
s Daubentonia_madagascariensis.ctg11                     16850075 78 +  31942871 TCA-GCA----CATTC-TT--TCC-AAA----C-TAAAC----T-AT--------TTA--TA--TTATAA-A-CT-T----------T-ATTGATA----TGCTGTG-CTT-TTGAATTAATAATT-AT-A
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80042415 70 -  96802777 -----TA----TGTTC-TTTGTTG-AAG----T-GAAGC----T-AT--------TTA--TA--TTCTAA-G-CT-T----------T-A----------TGCTATG-TTT-TTAcattaataatt-at-a
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18703021 70 -  18957592 -----TA----TGTTC-TT--TCG-Aag----t-aaaac----t-at--------ata--ta--ttttac-a-tt-t----------t-atagata----agcTGTG-CTT-TGGCATTAATAAT------
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 328302 71 +    993696 -----TA----TGTTC-TT--TCC-Aag----c-aaaat----t-at--------tta--ta--ttctaa-A-CT-T----------T-ATAGATA----TGCTTTG-CTT-CTgcatta---att-at-a
i Dicerorhinus_sumatrensis.PEKH010003161.1              I 4 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   8936 71 +    151128 -----TA----TGTTC-TT--TCC-AAG----C-AAAAT----T-AT--------TTA--TA--TTCTAA-A-CT-T----------T-ATAGATA----TGCTTTC-CTT-CTGCATTA---ATT-AT-A
i Diceros_bicornis.DicBicMic_scaffold_9545              I 4 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   160763 77 +    228994 -CA-GCA----TATTA-CT--TTC-AAG----C-TTAAC----T-AT--------TTA--TA--GTCTAA-A-CT-T----------T-ATAGGTA----TGCTACG-TAT-TTGCGTTCATAATT-AT-A
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3661245 45 +   4240102 ---------------------------------------------------------a--ta--ttttaa-a-ct-t----------t-ataaaCT----CA---CA-TTT-TTGTATTGatagtt-at-a
i Dipodomys_ordii.KN672545.1                            I 25 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  3619 45 -     11986 ---------------------------------------------------------A--TA--TTTTAA-A-CT-T----------T-ATAAACT----CA---CA-TTT-TTGTATTGATAGTT-AT-A
i Dipodomys_stephensi.DipSte_scaffold_84338             I 25 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                41530 53 -     73477 -------------------------------------------T-AC--------TTA--TA--GTCTAA-A-TT-T----------T-ATAGATA----TGCTATG-TTT-TTGCATTAATAATT-GT-G
i Dolichotis_patagonum.DolPat_scaffold_14102            I 21 C 0
s Echinops_telfairi.JH980316.1                           23002451 31 -  44670279 --------------------------------------C----T-AT--------TTA--CA--TTCTAA-A-CT-T----------T-ACTGATA----TATT---------------------------
i Echinops_telfairi.JH980316.1                          I 20 I 19
s Eidolon_helvum.KE772537.1                                 15024 74 +     24177 -----TA----TGTTC-TT--TCC-AAG----T-GAAAC----T-ac--------tta--ta--ttctaa-a-tt-t----------t-aaagata----tgctATG-CTT-ttgcattaataatt-at-a
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1498348 70 +   1727528 -----TA----TGTTC-TTTGTCC-AAG----T-GAAAC----T-AT--------TTA--TA--GCCTAA-A-CT-T----------T-A----------TGCTATG-CTT-TTATGTTAATAATT-AC-A
i Elaphurus_davidianus.JRFZ01086400.1                   I 4 C 0
s Elephantulus_edwardii.JH947210.1                        7835238 15 +  15467074 -------------------------------------------------------------------------------------------------------------------AATTGATAATTAAT-A
i Elephantulus_edwardii.JH947210.1                      I 45 C 0
s Ellobius_lutescens.LOEQ01003611.1                        244901 34 -    369425 -GA-GCA----CACTC-TT--CCC-AAA----C-TCAac----a-at--------tta--ta--tt-----------------------------------------------------------------
i Ellobius_lutescens.LOEQ01003611.1                     C 0 I 28
s Ellobius_talpinus.LOJH01076532.1                           1245 70 +      9159 -GA-GCA----CACTC-TT--CCC-AAA----C-TCAAC----A-AC--------TTA--TA--TT-TAA-G-CA-T----------T-CTA--------TTTT--G-TTT-GGTTGTCAATAATT-GC-A
i Ellobius_talpinus.LOJH01076532.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85879226 51 +  99434291 -----TA----TGTTC-TT--TCC-AAG----T-GAAGC----T-AT--------TTA--TA--TTCTAA-A-CT-T----------T-ATAGATA----TACA---------------------------
i Enhydra_lutris.KZ291749.1                             I 4 I 9
s Eptesicus_fuscus.JH977687.1                             4710807 44 +   6522550 ---------------------------------------------------------a--ta--ttctaa-a-tt-t----------t-atagaTA----AGCTGTG-CTT-TTGCATTAATAAT------
i Eptesicus_fuscus.JH977687.1                           I 22 C 0
s Equus_asinus.JREZ01000062.1                             5858165 71 -   7175178 -----TA----TGTTC-TT--TCC-aag----c-aaaat----t-at--------tta--ta--ttctaa-a-CT-T----------T-ATAGATG----TGCTATG-CTT-TTGcatta---att-at-a
i Equus_asinus.JREZ01000062.1                           I 4 C 0
s Equus_caballus.CM000402.2                              13356651 71 +  41866177 -----TA----TGTTC-TT--TCC-aag----c-aaaat----t-at--------tta--ta--ttctaa-a-CT-T----------T-ATAGATG----TGCTATG-CTT-TTGcatta---att-at-a
i Equus_caballus.CM000402.2                             I 4 C 0
s Equus_przewalskii.ATBW01073585.1                          18141 71 +     92910 -----TA----TGTTC-GT--TCC-aag----c-aaaat----t-at--------tta--ta--ttctaa-a-CT-T----------T-ATAGATG----TGCTATG-CTT-TTGcatta---att-at-a
i Equus_przewalskii.ATBW01073585.1                      I 4 C 0
s Erinaceus_europaeus.JH835290.1                         11543312 79 +  16010500 -----TGAGTCTGTTA-TT--TCC-AAG----C-AAAAC----T-AT--------CTT--TA--TTCTCAAG-GT-T----------T-ATAGACA----TGTTACA-CTT-TTGCATTAATAATT-AT-A
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48781805 77 -  48907691 TCA-TTA----CATTC-TT--TCC-AAA----T-GAAAC----T-AT--------TTA--TA--TTATAA-A-CT-T----------T-GTCGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-C
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          320666 70 +    330699 -----TA----TGTTC-TTCGTCC-AAG----T-GAAAC----T-AT--------TTA--TA--TTCTAA-A-TT-T----------T-A----------TGCTATG-TTT-TTACATTAATAATT-AT-A
i Eschrichtius_robustus.EscRob_flattened_line_685       I 4 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             67122 70 +     89355 -----TA----TGTTC-TTCGTCC-AAG----T-GAAAC----T-AT--------TTA--TA--TTCTAA-A-TT-T----------T-A----------TGCTATG-TTT-TTACATTAATAATT-AT-A
i Eubalaena_japonica.EubJap_flattened_line_7756         I 4 C 0
s Eulemur_albifrons.k141_715837                             10222 49 +     13586 --------------------------------------------------------TA--TA--TTATAA-A-CT-T----------T-ATTGATA----TGCTATG-CTT-TTGAATTAATGATT-AT-A
i Eulemur_albifrons.k141_715837                         I 25 C 0
s Eulemur_collaris.k141_1015201                              3481 49 -      4292 --------------------------------------------------------TA--TA--TTATAA-A-CT-T----------T-ATTGATA----TGCTATG-CTT-TTGAATTAATGATT-AT-A
i Eulemur_collaris.k141_1015201                         I 25 C 0
s Eulemur_coronatus.k141_3240342                            16618 49 +     36558 --------------------------------------------------------TA--TA--TTATAA-A-CT-T----------T-ATTGATA----TGCTATG-CTT-TTGAATTAATGATT-AT-A
i Eulemur_coronatus.k141_3240342                        I 25 C 0
s Eulemur_flavifrons.k141_903901                            12940 49 +     60246 --------------------------------------------------------TA--TA--TTATAA-A-CT-T----------T-ATTGATA----TGCTATG-CTT-TTGAATTAATGATT-AT-A
i Eulemur_flavifrons.k141_903901                        I 25 C 0
s Eulemur_fulvus.k141_653297                                16425 49 +    109717 --------------------------------------------------------TA--TA--TTATAA-A-CT-T----------T-ATTGATA----TGCTATG-CTT-TTGAATTAATGATT-AT-A
i Eulemur_fulvus.k141_653297                            I 25 C 0
s Eulemur_macaco.k141_747087                                 4408 49 -     19505 --------------------------------------------------------TA--TA--TTATAA-A-CT-T----------T-ATTGATA----TGCTATG-CTT-TTGAATTAATGATT-AT-A
i Eulemur_macaco.k141_747087                            I 25 C 0
s Eulemur_mongoz.k141_825972                                21083 49 +     27497 --------------------------------------------------------TA--TA--TTATAA-A-CT-T----------T-ATTGATA----TGCTATG-CTT-TTGAATTAATGATT-AT-A
i Eulemur_mongoz.k141_825972                            I 25 C 0
s Eulemur_rubriventer.k141_411740                           23539 49 +     26808 --------------------------------------------------------TA--TA--TTATAA-A-CT-T----------T-ATTGATA----TGCTATG-CTT-CTGAATTAATGATT-AT-A
i Eulemur_rubriventer.k141_411740                       I 25 C 0
s Eulemur_rufus.k141_1620292                                38271 49 +     46535 --------------------------------------------------------TA--TA--TTATAA-A-CT-T----------T-ATTGATA----TGCTATG-CTT-TTGAATTAATGATT-AT-A
i Eulemur_rufus.k141_1620292                            I 25 C 0
s Eulemur_sanfordi.k141_186399                              21012 49 -     29447 --------------------------------------------------------TA--TA--TTATAA-A-CT-T----------T-ATTGATA----TGCTATG-CTT-TTGAATTAATGATT-AT-A
i Eulemur_sanfordi.k141_186399                          I 25 C 0
s Felis_catus.CM001386.2                                129900933 51 - 159252932 -----TA----TGTTC-TT--TCC-AAC----T-GAaac----t-at--------tta--tg--ttttaa-a-at-t----------t-atagata----TGCA---------------------------
i Felis_catus.CM001386.2                                C 0 I 12
s Felis_catus_fca126.CM031420.1                         129287910 51 - 158578461 -----TA----TGTTC-TT--TCC-AAC----T-GAaac----t-at--------tta--tg--ttttaa-a-at-t----------t-ataggta----TGCA---------------------------
i Felis_catus_fca126.CM031420.1                         C 0 I 12
s Felis_nigripes.FelNig_flattened_line_8080                 29100 51 +     52776 -----TA----TGTTC-TT--TCC-AAC----T-GAAAC----T-AT--------TTA--TG--TTTTAA-A-AT-T----------T-ATAGATA----TGCG---------------------------
i Felis_nigripes.FelNig_flattened_line_8080             C 0 I 12
s Fukomys_damarensis.KN123630.1                          13897238 76 -  19261668 TCA-GCA----TATTA-CT--TTC-AAA----C-TAAGC----T-AT--------TTA--TA--GTATAA-A-T--T----------T-ATACATC----TGCTATA-TT--TTGCATTAATAATT-GT-A
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     216238 72 -    847004 TCA-GTA----CATTC-TT--TCC-AAA----C-TAAAC----T-AT--------TTA--TA--TTATGC-A-CT-T----------T-ATTGATA----TGCTAAG-CTT-TTGGATTAATC--------
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           18599 73 -     43889 TCA-GTA----CATTC-TT--TCC-AAA----CCTAAAC----T-AT--------TTA--TA--TTATGC-A-CT-T----------T-ATTGATA----TGCTAAG-CTT-TTGGATTAATC--------
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          15741 72 +     27357 TCA-GCA----CATTC-TT--TCC-AAA----C-TAAAC----T-AT--------TTG--TA--TTATGC-A-CT-T----------T-ATTGATA----TGCTAAG-CTT-TTGGATTAATC--------
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               160517 78 +    324696 TCA-GCA----CAATT-TT--TCC-AAA----C-TAAAC----T-AT--------TTA--TA--TTCTCA-A-CT-T----------T-GTAGATA----AGCTATG-CTT-TTGCATTAATAACT-AT-A
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    188152 42 -    189561 ---------------------------------------------------------A--TA--CTCTAA-A-CT-T----------T-T----------TGCTATG-CTT-TTACACTAATAATT-AC-A
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 28 C 0
s Glis_glis.GliGli_scaffold_79770                           17410 75 -     18683 TCA-TCA----CATTC-TC--TCC-CTA----C-TAAAT----G-GT--------TTA--TA--TTCTGA-A-CT-T----------C-AGA--TA----TACTATA-TTT-TT-CATTTATAATT-TT-A
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                              10207 78 -     14630 TCA-TTA----CATTC-TT--TCC-TAA----C-TAAAT----T-AT--------TTA--CA--TTATAC-A-CT-T----------T-GTTGATA----TGCTATG-CTT-TTGCATTAATAACT-CT-C
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119657307 78 - 195582420 TCA-TTA----CATTC-TT--TCC-TAa----c-taaat----t-at--------tta--ca--ttatac-A-CT-T----------T-GTTGATA----TGCTATG-CTT-TTGCATTAATAACT-CT-C
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   80727 76 +    118900 TCA-TCA----CAATG-TC--TCT-CTA----C-TAAAT----G-GC--------TTA--TA--TTCTGA-A-CT-C----------T-GTT--GA----TACTATG-CTT-TTGCATTTATAATT-TT-A
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         7012 49 +     10286 --------------------------------------------------------TA--TA--TTATAA-A-CT-T----------T-ATAGATA----TGCTATG-GTT-TTGAATTAATGATT-AT-A
i Hapalemur_alaotrensis.k141_1280836                    I 25 C 0
s Hapalemur_gilberti.k141_279011                             5493 49 -     11661 --------------------------------------------------------TA--TA--TTATAA-A-CT-T----------T-ATAGATA----TGCTATG-GTT-TTGAATTAATGATT-AT-A
i Hapalemur_gilberti.k141_279011                        I 25 C 0
s Hapalemur_griseus.k141_1387522                            10817 49 +     56096 --------------------------------------------------------TA--TA--TTATAA-A-CT-T----------T-ATAGATA----TGCTATG-GTT-TTGAATTAATGATT-AT-A
i Hapalemur_griseus.k141_1387522                        I 25 C 0
s Hapalemur_meridionalis.k141_186231                        34066 49 -     42470 --------------------------------------------------------TA--TA--TTATAA-A-CT-T----------T-ATAGATG----TGCTATG-GTT-TTGAATTAATGATT-AT-A
i Hapalemur_meridionalis.k141_186231                    I 25 C 0
s Hapalemur_occidentalis.k141_797938                        50692 49 -     54384 --------------------------------------------------------TA--TA--TTATAA-A-CT-T----------T-ATAGATA----TGCTATG-GTT-TTGAATTAATGATT-AT-A
i Hapalemur_occidentalis.k141_797938                    I 25 C 0
s Helogale_parvula.HelPar_flattened_line_22962              24414 51 +     53719 -----TA----TGTTC-TT--TCC-AAG----T-GAAAC----T-AT--------TTA--TA--TTATAA-A-CT-T----------T-ATAGATA----TATA---------------------------
i Helogale_parvula.HelPar_flattened_line_22962          C 0 I 12
s Hemitragus_hylocrius.HemHyl_scaffold_16669                35257 70 -     91191 -----TA----TGTTC-TCTGTCC-AAG----T-GAAAC----T-AT--------TTA--TA--CTCTAA-A-CT-T----------T-A----------TGTGATG-CTT-TTATGTTAATAATT-AC-A
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 4 C 0
s Heterocephalus_glaber.JH602058.1                        2561564 77 +  31725842 TCA-GCA----CATTG-CT--TTC-AGG----C-TAAGC----T-AT--------TTa--ta--gtataa-a-t--t----------t-atatata----tgctata-ttt-ttgtgttattaaTT-GT-A
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               63854 35 +     73687 ---------------------------------------------------------------------------------------T-ACTGATA----TGACATA-GTT-TTTCATTAGTAATT-AT-A
i Heterohyrax_brucei.HetBruBak_scaffold_25354           I 35 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              152471 70 +    277961 -----TA----TGTTC-TTTGTTC-AAG----T-GAAAT----T-AT--------TTA--TA--TTCTAA-A-CT-T----------T-A----------TGCTATG-CTT-TTATATTAATAACT-AT-A
i Hippopotamus_amphibius.HipAmp_scaffold_1308           I 4 C 0
s Hipposideros_armiger.JXIK01001085.1                      285510 74 -    477199 -----TA----TGTTC-TT--TCC-AAG----T-GAAAC----T-Ac--------tta--ta--ttctaa-a-tt-t----------t-atagATA----TGCTCTG-CTT-ttgcattcataatt-tt-a
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959               3196 73 +     26078 -----TA----TGTTC-TT--T-C-AAG----T-AAAAC----T-AT--------TTA--TA--TTCTAA-A-TT-G----------T-ATAGATA----TGCTCTG-CTT-TTGCATTCATAATT-AT-A
i Hipposideros_galeritus.HipGal_scaffold_52959          C 0 C 0
s Hoolock_leuconedys.ctg79                                     10132 78 -   7690867 TTA-TTA----CATTC-TT--TCC-TAA----C-TAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCAATA----TGCTATG-CTT-TTGCATTAATAATT-CT-C
i Hoolock_leuconedys.ctg79                                 I 21 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 24850 51 -     67322 -----TA----TGTTC-TT--TCC-AAG----T-GAAAC----T-AT--------TTA--TA--TTATAA-A-CT-T----------T-ATAGATA----TACA---------------------------
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 I 12
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           22149 78 -    119109 TGA-GCA----CATTA-CT--TTC-AAA----C-TAAAC----T-AT--------TTA--TA--GGCTAA-A-TT-T----------T-ATAGATA----TGCTATG-TTT-TTGCATTCATAATT-GG-A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_1816750                             2703 78 +      3202 TTA-TTA----TATTC-TT--TCC-TAA----C-TAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCAATA----TGCTATG-CTT-TTGCATTAATAATT-CT-C
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1136966                               712 78 +      9785 TTA-TTA----TATTC-TT--TCC-TAA----C-TAAAC----T-AT--------TTA--CG--TTATAA-A-CT-T----------T-GTCAATA----TGCTATG-CTT-TTGCATTAATAATT-CT-C
i Hylobates_agilis.k141_1136966                         C 0 C 0
s Hylobates_klossii.k141_468230                              4192 78 +      5464 TTA-TTA----TATTC-TT--TCC-TAA----C-TAAAC----T-AT--------TTA--CG--TTATAA-A-CT-T----------T-GTCAATA----TGCTATG-CTT-TTGCATTAATAATT-CT-C
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14629538 78 -  25970782 TTA-TTA----CATTC-TT--TCC-TAA----C-TAAAC----T-AT--------TTA--CG--TTATAA-A-CT-T----------T-GTCAATA----TGCTATG-CTT-TTGCATTAATAATT-CT-C
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            2090 78 +      4161 TTA-TTA----CATTC-TT--TCC-TAA----C-TAAAC----T-AT--------TTA--CG--TTATAA-A-CT-T----------T-GTCAATA----TGCTATG-CTT-TTGCATTAATAATT-CT-C
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                    10473 78 +     22540 TCA-GCA----CATTA-CT--TTC-AAA----C-TAATC----T-AT--------TTA--TA--TTATAA-A-TT-T----------T-ATACTTA----CGCTATG-TTT-TTGCATTAATAATT-GT-A
i Hystrix_cristata.HysCri_scaffold_50788                I 3 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7131311 76 +  13083262 TCA-TCA----CATTC-TT--TCC-CAA----C-TAAAC----t-at--------gtg--ta--ttttaa-a-ct-t----------t-atagatA----T--GCTG-TTT-TTGCATAAATAATT-AT-G
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   2557 46 +      3484 -------------------------------------------------------------A--TTATAA-A-CT-T----------T-ATTGATA----TGCTATG-CTT-TTGAATTAATAATT-AT-A
i Indri_indri.k141_2197838                              I 32 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              14643 72 +     17520 -----TA----TGTTC-TTTGTCG-AAG----T-GAAGC----T-AT--------TTATATA--TTCTAA-A-CT-T----------T-A----------TGCTATG-CTT-TTACATTAATAATT-AT-A
i Inia_geoffrensis.IniGeo_flattened_line_66725          I 4 C 0
s Jaculus_jaculus.JH725517.1                              8580141 36 +  11848649 ----------------------------------------------------------------------------T----------T-TTAGATG----TGCTATG-TTT-TAGTGTTAATAGTC-AT-C
i Jaculus_jaculus.JH725517.1                            I 40 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               29262 70 +     37189 -----TA----TGTTC-TTTGTCC-AAG----T-GAAAC----T-AT--------TTA--TA--TTCTAA-A-CT-T----------T-A----------TGCTATG-TTT-TTACATTAATAATT-AT-A
i Kogia_breviceps.KogBre_flattened_line_35920           I 4 C 0
s Lagothrix_lagothricha.k141_12968                          54982 56 -    147782 ------------------------------------AAC----T-AT--------TTA--TA--TAATAA-G-CT-T----------T-GTCAAGA----TGCTATG-CTT-TTGCATTAATAATT-CT-C
i Lagothrix_lagothricha.k141_12968                      I 17 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    7358 44 +     26176 ---------------------------------------------------------A--TA--TTCTAA-A-TT-T----------T-ATAGATA----ACCTATA-CTT-TTGCATTAATAGT------
i Lasiurus_borealis.LasBor_scaffold_59542               I 22 C 0
s Lemur_catta.scaffold_1                                258412370 49 - 285822530 --------------------------------------------------------TA--TA--TTATAA-A-CT-T----------T-ATTGATA----TGCTATG-GTT-TTAAATTAATGATT-AT-A
i Lemur_catta.scaffold_1                                I 25 C 0
s Lepilemur_ankaranensis.k141_884009                        29701 46 +     39228 -------------------------------------------------------------A--TTATAA-A-TT-T----------T-ATTGATA----TGCTATG-CTT-TTGAATTAATAATT-AT-A
i Lepilemur_ankaranensis.k141_884009                    I 32 C 0
s Lepilemur_dorsalis.k141_134267                            59065 46 +     63517 -------------------------------------------------------------A--TTATAA-A-TT-T----------T-ATTGATA----TGCTATG-CTT-TTGAATTAATAATT-AT-A
i Lepilemur_dorsalis.k141_134267                        I 32 C 0
s Lepilemur_ruficaudatus.k141_574529                        37447 46 -     38897 -------------------------------------------------------------A--TTATAA-A-CT-T----------T-ATTGATA----TGCTATG-CTT-TTGAATTAATAATT-AT-A
i Lepilemur_ruficaudatus.k141_574529                    I 32 C 0
s Lepilemur_septentrionalis.k141_710646                      3491 46 -     13103 -------------------------------------------------------------A--TTATAA-A-TT-T----------T-ATTGATA----TGCTATG-CTT-TTGAATTAATAATT-AT-A
i Lepilemur_septentrionalis.k141_710646                 I 32 C 0
s Leptonychotes_weddellii.KB714749.1                      3093171 51 -   3498232 -----TA----TGTTC-TT--TCC-AAG----T-GAAGC----t-at--------tta--ta--ttctaa-a-ct-t----------t-atagata----tacg---------------------------
i Leptonychotes_weddellii.KB714749.1                    I 4 I 12
s Lepus_americanus.LepAme_scaffold_62849                    21973 50 +     22452 ----------------------------------------------A--------TTA--TA--TTCTAA-A-CT-TT-----A---C---AGA-A----TGTTGCA-CTT-CTACATTAATAATT-AG-A
i Lepus_americanus.LepAme_scaffold_62849                I 25 C 0
s Lipotes_vexillifer.KE558548.1                            141572 70 +   3060487 -----CA----TGTTC-TTTGTTG-AAG----T-GAAGC----T-AT--------TTA--TA--TTCTAA-A-CT-T----------T-A----------TGCTATG-TTT-CTAcattaataatt-at-a
i Lipotes_vexillifer.KE558548.1                         I 7 C 0
s Lophocebus_aterrimus.ctg55                             19253426 77 +  19376315 TCA-TTA----CATTC-TT--TCC-AAA----C-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-C
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           16222 52 +     84689 ----------------------------------TAAAC----T-AT--------TTG--TA--TTATAA-A-CT-T----------T-ATTGATA----TGCTAAG-CTT-CTGAATTTATA--------
i Loris_lydekkerianus.k141_550999                       I 19 C 0
s Loris_tardigradus.ctg97                                 3783957 52 +   6799190 ----------------------------------TAAAC----T-AT--------TTG--TA--TTATAA-A-CT-T----------T-ATTGATA----TGCTAAG-CTT-CTGAATTTATA--------
i Loris_tardigradus.ctg97                               I 19 C 0
s Loxodonta_africana.GL010040.1                          20599754 56 -  62548349 --------------------------------------C----T-AT--------TTA--CAATTTGTAA-A-CT-T----------A-ACTAATA----TGATGTG-CTT-TTGCATTAATAATG-AT-A
i Loxodonta_africana.GL010040.1                         I 16 C 0
s Lycaon_pictus.CM007556.1                               11096929 51 +  39895028 -----TA----TCTTC-TT--TCC-AAG----T-GAAgc----t-at--------tta--ta--ttctta-a-tt-t----------t-atagaca----taca---------------------------
i Lycaon_pictus.CM007556.1                              I 4 I 12
s Macaca_arctoides.k141_2201161                             25175 77 +     74745 TCA-TTA----CATTC-TT--TCC-AAA----C-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-C
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12711638 77 +  12821369 TCA-TTA----CATTC-TT--TCC-AAA----C-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-C
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                4211 77 -     26467 TCA-TTA----CATTC-TT--TCC-AAA----C-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-C
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           52082 77 +     63263 TCA-TTA----CATTC-CT--TCC-AAA----C-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-C
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 4192 77 -     26361 TCA-TTA----CATTC-TT--TCC-AAA----C-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-C
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_2667654                                 495 77 -      5626 TCA-TTA----CATTC-TT--TCC-AAA----C-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-C
i Macaca_leonina.k141_2667654                           C 0 C 0
s Macaca_maura.k141_251854                                  50611 77 -     79256 TCA-TTA----CATTC-TT--TCC-AAA----C-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-C
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196040709 77 + 196197964 TCA-TTA----CATTC-TT--TCC-AAA----C-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-C
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11450879 77 +  11645122 TCA-TTA----CATTC-TT--TCC-AAA----C-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-C
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   9565 77 -     46448 TCA-TTA----CATTC-TT--TCC-AAA----C-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-C
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                7226 77 -     13212 TCA-TTA----CATTC-TT--TCC-AAA----C-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-C
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 20908 77 -     55006 TCA-TTA----CATTC-TT--TCC-AAA----C-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-C
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43846330 77 +  43892939 TCA-TTA----CATTC-TT--TCC-AAA----C-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-C
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               22192 77 -     24607 TCA-TTA----CATTC-TT--TCC-AAA----C-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-C
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               9562 77 -     27140 TCA-TTA----CATTC-TT--TCC-AAA----C-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-C
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                703657 74 +    802869 -----TA----TGTTC-TT--TCC-AAG----T-GAAAC----T-AC--------TTA--TA--TTCTAA-A-TT-T----------T-AAAGATA----TGCTATG-CTT-TTGCATTAATAATT-AT-A
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43442598 77 -  43563597 TCA-TTC----CATTC-TT--TCC-AAA----T-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-T
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4455428 46 -   4543643 ------------------------------------------------------------CA--TTATAA-A-CT-T----------T-GTCGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-C
i Mandrillus_sphinx.Contig144                           I 27 C 0
s Manis_javanica.JSZB01003966.1                            153928 71 +    252755 -----TA----TGTTC-CT--TCC-AAG----A-GACAC----T-AT--------TTA--TC--TCCTAA-A-CT-T----------T-ATAGATA----TACTATG-CTT-TTACATTA---ATT-AT-A
i Manis_javanica.JSZB01003966.1                         I 4 C 0
s Manis_pentadactyla.KN017078.1                             41525 71 +     58827 -----TA----TGTTC-CT--TCC-AAG----A-GACAC----T-AT--------TTA--TA--TCCTAA-A-CT-T----------T-ATAGATA----TACTATG-CTT-TTACATTA---ATT-AT-A
i Manis_pentadactyla.KN017078.1                         I 4 C 0
s Marmota_marmota.CZRN01000005.1                         36879178 75 +  64221397 TCA-TCA----CATTC-TT--TCC-CAA----C-TAAGC----t-at--------gtg--ta--ttttaa-a-ct-t----------t-atagaTA----T--GCTG-TT--TTGCATAAATAATT-AT-G
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       67431 74 -    234502 -----TA----TGGTC-TT--TGC-AAA----T-GAAAC----T-AT--------TTA--TA--TTCGAA-A-TT-T----------T-ATAGATA----GACTCTG-CTT-TTGCATTAATAATT-AG-A
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             8323 51 -     87323 -----TA----TGTTC-TT--TCC-AAG----T-GAAGC----T-AT--------TTA--TA--TTCTAA-A-CT-T----------T-AAAGATA----TACA---------------------------
i Mellivora_capensis.MelCap_flattened_line_15433        I 4 I 9
s Meriones_unguiculatus.MerUng_scaffold_9483                 3157 84 +    115071 TGA-GTA----TATTC-TT--CCC-AAA----C-TGGAC----A-GT-ATTTTTTTAA--TA--TTTTAA-A-CA-T----------T-GTA----AATATTCTATA-TTT-CAATGTCAATAATT-AC--
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1052753 71 -  26018355 TGA-GCA----CATTC-CT--CCA-AAA----G-TAGAC----A-AT--------TTA--TA--TTTTCA-A-CA-T----------T-GTA--------TTCTGTG-TT----TTGTCAATAATT-AC-A
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    4233 70 -     12939 -----TA----TGTTC-TTTGTCC-AAG----T-GAAGC----T-AT--------TTA--TA--TTCTAA-A-CT-T----------T-A----------CGCTATG-TTT-TTACATTAATAATT-AT-A
i Mesoplodon_bidens.MesBid_scaffold_96348               I 4 C 0
s Microcebus_murinus.CM007691.1                          16515425 46 +  47401472 -------------------------------------------------------------A--TTATAA-A-CT-T----------T-ATTGATA----TACTATG-CTT-TTGAATTAATAATT-AG-A
i Microcebus_murinus.CM007691.1                         I 32 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  44075 48 -     48017 ---------------------------------------------------------A--CA--TTCTAA-A-CT-T----------T-ATTGACA----TATTGTG-T-TTTTACATGAATAATT-AC-A
i Microgale_talazaci.MicTal_scaffold_34660              I 22 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               26758 70 -     32043 -----TA----TGTTC-TT--TCG-AAG----T-GAAAC----T-AT--------ATA--TA--TTTTAC-A-TT-T----------T-ATAGATA----TGCTATG-CTT-TGGCATTAATAAT------
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22825729 48 -  98408828 -GA-GCA----CACTC-TT--CCC-AAA----C-TCAAC----A-AT--------TTA--TA--TT-TAA-G-CA-T----------T-ATA--------TTG----------------------------
i Microtus_ochrogaster.CM001673.1                       C 0 I 20
s Miniopterus_natalensis.LDJU01000022.1                   8215112 69 +  10048721 -----TA----TGTTC-TT--TCC-AAG----T-GAagc----t-at--------tta--ta--ttataa-a-tt-t----------t-ata-aca----tgCTATG-CTT-TTGCATCGACAGT------
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            39570 70 +     45743 -----TA----TGTTC-TT--TCC-AAG----T-GAAGC----T-AT--------TTA--TA--TTATAA-A-TT-T----------T-ATAGACA----TGCTATG-CTT-TTGCATCGACAGT------
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         7144 77 +     29742 TCA-TTA----CATTC-TT--TCC-AAA----T-GAAAC----T-AT--------TTA--TA--TTATAA-A-CT-T----------A-GTCGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-C
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        18667 51 -    104932 -----TA----TGTTC-TT--TCC-AAG----T-GAAGC----T-AT--------TTA--TA--TTCTAA-A-CT-T----------T-ATAGATA----TACG---------------------------
i Mirounga_angustirostris.MirAng_flattened_line_8852    I 4 I 12
s Mirza_zaza.k141_593947                                     6110 56 -     12809 -------------------------------------------------------------A--TTATAA-A-TT-TTGTTGTATTGT-ATTGATA----TACCATG-CTT-TTGAATTAATAATT-AG-A
i Mirza_zaza.k141_593947                                I 32 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 152008 70 +    154973 -----TA----TGTTC-TTTGTTG-AAG----T-GAAGC----T-AT--------TTA--TA--TTCTAA-G-CT-T----------T-A----------TGCTATG-TTT-TTACATTAATAATT-AT-A
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                165273 70 +    265003 -----TA----TGTTC-TT--TCC-AAG----T-GAAAC----T-AT--------ATA--TA--TTTTAC-C-TT-T----------T-ATATATA----TGCTATA-CTT-TGGCATTAATAAT------
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  8807 70 -     19904 -----TA----CGTTC-TTTATCC-AAG----T-GAAAC----T-AT--------TTA--TA--CTCTAA-A-CT-T----------T-A----------TGCTATG-CTT-TTATGTTAATAATT-AC-A
i Moschus_moschiferus.MosMos_scaffold_78805             I 4 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  152143 51 -    168139 -----TA----TGTTC-TT--TCC-AAG----T-GAAAT----T-AT--------TTA--TA--TTATAA-A-CT-T----------T-TAAGATA----TACA---------------------------
i Mungos_mungo.MunMun_flattened_line_8729               C 0 I 12
s Murina_feae.MurFea_scaffold_2254                          26100 70 -    100666 -----TA----TGTTC-TT--ACT-AAG----T-GAAAC----T-AT--------TTA--TA--TTCTAA-A-TT-T----------T-ATAGATA----AGCTATG-CTT-TTGCATTAATAAT------
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70772995 35 +  92629107 ------A----TATTA-TT--TAC-AAA----C-TAGac----a-ta--------tta--ta--ttatac-a-----------------------------------------------------------
i Mus_caroli.LT608236.1                                 C 0 I 31
s Mus_musculus.chr16                                     75495047 35 +  98207768 ------a----tattc-tt--tAC-AAA----C-TAgac----a-ta--------tta--ta--ttatac-a-----------------------------------------------------------
i Mus_musculus.chr16                                    C 0 I 46
s Mus_pahari.LT608305.1                                  67561798 32 +  89017189 -----------TATTC-TT--TAC-AAA----C-TAAAC----A-TA--------TTA--TG--TTATA--------------------------------------------------------------
i Mus_pahari.LT608305.1                                 C 0 I 31
s Mus_spretus.CM004110.1                                 74337770 35 +  97876770 ------a----tattc-tt--tac-aaa----c-tagac----a-ta--------cta--ta--ttataA-A-----------------------------------------------------------
i Mus_spretus.CM004110.1                                C 0 I 31
s Muscardinus_avellanarius.MusAve_scaffold_9643             15817 67 +     98495 -------------TAG-TC--T-C-CAA----T-TAAAT----A-TC--------TTA--TC--TTCTGA-A-CT-T----------C-AGA--TA----TACTATG-TTT-CTGCATTTATAATT-TT-A
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 2 C 0
s Mustela_putorius.JH417978.1                             4430424 51 -  28371801 -----TA----TGTTC-TT--TCC-AAG----T-GAAGC----T-AT--------TTA--TA--TTCTAA-A-CT-T----------T-ATAGATA----TACA---------------------------
i Mustela_putorius.JH417978.1                           I 4 I 9
s Myocastor_coypus.MyoCoy_scaffold_3653                     96547 78 -    117718 TCA-ACA----CATTA-CT--TCC-AAA----C-TAAAC----T-AT--------TTA--TA--GTTTAA-G-TT-T----------T-ATAGACA----TGCTATG-TCT-TTGCATTAATAATT-GT-A
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 3 C 0
s Myotis_brandtii.KE161952.1                               973114 70 +   8389877 -----TA----TGTTC-TT--ACT-AAG----T-GAAAC----T-AT--------TTA--TA--TCCTAA-A-TT-T----------T-ATAGATA----AGCTATG-CTT-TTGCATTAATAAT------
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5024192 70 +   6462685 -----TA----TGTTC-TT--ACT-AAG----T-GAAAC----t-at--------tta--ta--ttctaa-a-tt-t----------t-atagaTA----AGCTATG-CTT-TTGCATTAATAAT------
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3470621 70 -   3747815 -----TA----TGTTC-TT--ACT-AAG----T-GAAAC----T-AT--------TTA--TA--TCCTAA-A-TT-T----------T-ATAGATA----AGCTATG-CTT-TTGCATTAATAAT------
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        15848 70 +     66751 -----TA----TGTTC-TT--ACT-AAG----T-GAAAC----T-AT--------TTA--TA--TTCTAA-A-TT-T----------T-ATAGATA----AGCTATG-CTT-TTGCATTAATAAT------
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_12795                13 69 -     87886 -----CA----CATTC-CT--TCC-AAA----C-TAAAC----T-AT--------TTA--TA--TTATAA-A-TT-T----------T-A----TA----TTCAATC-CTT-TTGCATTAATAATT--T-A
i Myrmecophaga_tridactyla.MyrTri_scaffold_12795         N 0 C 0
s Nannospalax_galili.KL201303.1                            125477 53 +    362372 TCA-GCA----CATTC-TT--GGG-AAA----C-TAGAC----a-at--------tta--ta--ttctaa-a-ta-t----------t-atagata----ta-----------------------------
i Nannospalax_galili.KL201303.1                         C 0 I 19
s Nasalis_larvatus.k141_153429                              11407 77 +     48152 TCA-TTA----CATTC-TT--TCC-AAA----C-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-C
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4492058 51 -  14209539 -----TA----TGTTA-TT--TCC-AAG----T-GAAGC----t-at--------tta--ta--ttctaa-a-ct-t----------t-atagata----tacg---------------------------
i Neomonachus_schauinslandi.NINY01007774.1              I 4 I 12
s Neophocaena_asiaeorientalis.KZ688543.1                  3956599 70 -   4490290 -----TA----TGTTC-TTTGTTG-AAG----T-GAAGC----T-AT--------TTA--TA--TTCTAA-A-CT-T----------T-A----------TGCTATG-TTT-TTAcattaataatt-at-a
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  52588 38 +     94413 -----GA----TGTTC-TT--TTC-AAG----T-GAAAC----T-AT--------GTA--TT--TTTTAC-A-TT--------------------------------------------------------
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 I 31
s Nomascus_annamensis.k141_762468                            1209 78 -      2755 TTA-TTA----CATTC-TT--TCC-TGA----C-TAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCAATA----TGCTATG-CTT-TTGCATTAATAATT-CT-C
i Nomascus_annamensis.k141_762468                       C 0 C 0
s Nomascus_concolor.k141_256540                              7819 78 -      8966 TTA-TTA----CATTC-TG--TCC-TAA----C-TAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCAATA----TGCTATG-CTT-TTGCATTAATAATT-CT-C
i Nomascus_concolor.k141_256540                         C 0 C 0
s Nomascus_gabriellae.k141_1400361                           1760 78 -      2203 TTA-TTA----CATTC-TT--TCC-TAA----C-TAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCAATA----TGCTATG-CTT-TTGCATTAATAATT-CT-T
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_453                             7072 78 +     12787 TTA-TTA----CATTC-TT--TCC-TAA----C-TAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCAATA----TGCTATG-CTT-TTGCATTAATAATT-CT-T
i Nomascus_siki_b.tarseq_453                        I 21 C 0
s Nomascus_siki_a.k141_421408                                  1674 78 +     16235 TTA-TTA----CATTC-TT--TCC-TAA----C-TAAAC----T-AT--------TTA--AA--TTATAA-A-CT-T----------T-GTCAATA----TGCTATG-CTT-TTGCATTAATAATT-CT-T
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                39799 51 +   3668941 -----TA----TCTTC-TT--TCC-AAG----T-GAAgc----t-at--------tta--ta--ttctta-a-tt-t----------t-atagaca----taca---------------------------
i Nyctereutes_procyonoides.CAJHUB010000786.1            I 4 I 12
s Nycticebus_bengalensis.LG16                            65572992 52 -  95554990 ----------------------------------TAAAC----T-AT--------TTG--TA--TTATAA-A-CT-T----------T-ATTGCTA----TGCTAAG-CTT-CTGAATTTATA--------
i Nycticebus_bengalensis.LG16                           I 19 C 0
s Nycticebus_coucang.k141_6040852                             629 52 +      1868 ----------------------------------TAAAC----T-AT--------TTG--TA--TTATAA-A-CT-T----------T-ATTGCTA----TGCTAAG-CTT-CTGAATTTATA--------
i Nycticebus_coucang.k141_6040852                       I 19 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65681177 52 +  89412551 ----------------------------------TAAAC----T-AT--------TTG--TA--TTATAA-A-CT-T----------T-ATTGCTA----TGGTAAG-CTT-CTGAATTTATA--------
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     I 19 C 0
s Ochotona_princeps.JH802095.1                            5001053 33 -  23139505 ---------------------------------------------------------------------------------------C---AGATA----TGACATA-GAT-CTGTGTTAATAATT-AG-A
i Ochotona_princeps.JH802095.1                          I 33 C 0
s Octodon_degus.JH651621.1                                3691890 78 +  10294119 TCA-ACA----CATTA-CT--TTC-AAA----C-TAAAC----T-AT--------TTA--TA--GCTTAA-G-TT-T----------T-AAAGATA----TTCTATG-TTT-TTGCATTAATAATT-GT-A
i Octodon_degus.JH651621.1                              I 7 C 0
s Odobenus_rosmarus.KB229369.1                             686757 36 -   3126709 -----TA----TGTTC-TT--TCC-AAG----T-GAAGC----T-AT--------TTA--TA--TTCTAA-A-----------------------------------------------------------
i Odobenus_rosmarus.KB229369.1                          I 4 C 0
s Odocoileus_virginianus.KZ101650.1                       1085782 36 +   1425656 -----TA----TGTTC-TTTGTCC-AAG----T-GAAAC----T-AT--------TTA--TA--CCCTA--------------------------------------------------------------
i Odocoileus_virginianus.KZ101650.1                     I 4 I 31
s Okapia_johnstoni.LVCL01S0017931.1                         43872 42 +     78940 ---------------------------------------------------------A--TA--CTCTAA-A-CT-T----------T-A----------TGCTATG-CTT-TTACATTAATAATT-AC-A
i Okapia_johnstoni.LVCL01S0017931.1                     I 28 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  131537 71 +    145789 -GA-GCA----CATTC-TT--CCC-AAA----C-TCAAC----A-AT--------TTA--TA--TT-TAA-A-CA-T----------T-ATA--------TTCT--GTTTT-TGTTGTCAATATTT-GC-A
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  44463 74 +     62360 TGA-GAA----CATTC-TT--CCC-AAA----C-TAGAC----A-AT--------TTA--CA--TTTTAA-A-CA-T----------C-ATA--------TGCTATG-CTT-TGTTGTTAATAATT-AC-A
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7230280 70 -   7562323 -----TA----TGTTC-TTTGTCG-AAG----T-GAAGC----T-AT--------TTA--TA--TTCTAA-A-CG-T----------T-A----------TGCTATG-TTT-TTacattaataatt-at-a
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              65134 53 -     66828 --------------------------------------C----T-AT--------TTA--CT--TTCTAA-A-CT-A----------T-AACCATA----CAAAATG-T-T-TTGCATTAATAATT-AT-A
i Orycteropus_afer.OryAfe_flattened_line_13509          I 22 C 0
s Oryctolagus_cuniculus.CM000803.1                      141884988 51 + 163896628 ----------------------------------------------a--------tta--ta--ttctaA-A-CT-TT-----A---C---AGATA----TGCTGCT-CTT-CTACATTAATAATT-AG-A
i Oryctolagus_cuniculus.CM000803.1                      I 32 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      316936 51 -    505867 -----TA----TGTTC-TT--TCC-AAG----T-GAAgc----t-at--------tta--ta--ttctta-a-tt-t----------t-atagaca----taca---------------------------
i Otocyon_megalotis.JAEUCK010005121.1                   I 4 I 12
s Otolemur_crassicaudatus.k141_505435                        6099 72 -     53940 TCA-GTA----CATTC-TT--TCC-AAA----C-TAAAC----T-AT--------TTG--TA--TTATGC-A-CT-T----------T-ATTGATA----TGCTAAG-CTT-TTGGGTTAATC--------
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18014065 72 -  38779656 TCA-GTA----CATTC-TT--TCC-AAA----C-TAAAC----T-AT--------TTG--TA--TTATGC-A-CT-T----------T-ATTGATA----TGCTAAG-CTT-TTGGATTAATC--------
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134085039 70 - 275406953 -----TA----TGTTC-TCTGTCC-AAG----T-GAAAC----T-AT--------TTA--TA--CTCTAA-A-CT-T----------T-A----------TGCGATG-CTT-TTATGTTAATAATT-AC-A
i Ovis_aries.CM001582.2                                 I 4 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      86280 70 +    140051 -----TA----TGTTC-TCTGTCC-AAG----T-GAAAC----T-AT--------TTA--TA--CTCTAA-A-CT-T----------T-A----------TGCGATG-CTT-TTATGTTAATAATT-AC-A
i Ovis_canadensis.OviCan_scaffold_6251                  I 4 C 0
s Pan_paniscus.AJFE02000020.1                                 519 78 -      1352 TCA-TTA----CATTC-TT--TCC-TAA----C-TAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTTGATA----TGCTATG-CTT-TTGCATTAATAATT-CT-C
i Pan_paniscus.AJFE02000020.1                           I 110 I 35
s Pan_troglodytes.NBAG03004582.1                             4518 78 +      4638 TCA-TTA----CATTC-TT--TCC-TAA----C-TAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTTGATA----TGCTATG-CTT-TTGCATTAATAATT-CT-C
i Pan_troglodytes.NBAG03004582.1                        I 4213 n 108
s Panthera_onca.PanOnc_flattened_line_1615                  41698 51 +    295523 -----TA----TGTTC-TT--TCC-AAG----T-GAAAC----T-AT--------TTA--TG--TTTTAA-A-AT-T----------T-ATAGATA----TGCA---------------------------
i Panthera_onca.PanOnc_flattened_line_1615              C 0 I 12
s Panthera_pardus.KV860323.1                              3645514 51 +  18214204 -----TA----TGTTC-TT--TCC-AAG----T-GAaac----t-at--------tta--tg--ttttaa-a-at-t----------t-atagata----tgca---------------------------
i Panthera_pardus.KV860323.1                            C 0 I 12
s Panthera_tigris.KE721879.1                              5035151 51 -   6340057 -----TA----TGTTC-TT--TCC-AAG----T-GAaac----t-at--------tta--tg--ttttaa-a-at-t----------t-atagata----tgca---------------------------
i Panthera_tigris.KE721879.1                            C 0 I 12
s Pantholops_hodgsonii.KE114631.1                         1073912 70 -   1292953 -----TA----TGTTC-TTTGTCC-AAG----T-GAAAC----T-AT--------TTA--TA--CTCTAA-A-CT-T----------T-A----------TGTGATG-CTT-TTATGTTAATAATT-AC-A
i Pantholops_hodgsonii.KE114631.1                       I 4 C 0
s Papio_anubis.CM001492.2                               188161387 77 - 188283584 TCA-TTA----GATTC-TT--TCC-AAA----C-GAAAC----T-AT--------TTA--CA--TGATAA-A-CT-T----------T-GTCGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-C
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              4477 77 +     25005 TCA-TTA----CATTC-TT--TCC-AAA----C-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTTGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-C
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47518759 77 +  47705337 TCA-TTA----GATTC-TT--TCC-AAA----C-GAAAC----T-AT--------TTA--CA--TGATAA-A-CT-T----------T-GTCGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-C
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 72750 77 -    104429 TCA-TTA----GATTC-TT--TCC-AAA----C-GAAAC----T-AT--------TTA--CA--TGATAA-A-CT-T----------T-GTCGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-C
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   11282 77 +     14967 TCA-TTA----GATTC-TT--TCC-AAA----C-GAAAC----T-AT--------TTA--CA--TGATAA-A-CT-T----------T-GTCGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-C
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 7147 77 -      7628 TCA-TTA----GATTC-TT--TCC-AAA----C-GAAAC----T-AT--------TTA--CA--TGATAA-A-CT-T----------T-GTTGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-C
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    123175 51 -    135482 -----TA----TGTTC-TT--TCC-AAG----T-GAAAC----T-AT--------TTA--TA--TTATAA-A-CT-T----------T-ATACATA----TACA---------------------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 I 12
s Perodicticus_ibeanus.k141_117958                          11765 72 -     23713 TCA-GCA----CATTC-TT--TCC-AAA----C-TAAAC----T-AT--------TTG--TA--TTATAA-A-CT-T----------T-ATTGATA----TGCTAAG-CTT-TTGAATTAATA--------
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           12916 72 +     61070 TCA-GCA----CATTC-TT--TCC-AAA----C-TAAAC----T-AT--------TTG--TA--TTATAA-A-CT-T----------T-ATTGATA----TGCTAAG-CTT-TTGAATTAATA--------
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       3246 24 +     49596 ---------------------------------------------------------A--TA--TTCTAA-A-CT-G----------T-ATAAATC----CA---C-------------------------
i Perognathus_longimembris.PerPac_flattened_line_19359  I 23 I 16
s Peromyscus_maniculatus.KI615458.1                       2840309 41 -   3366660 ----------------------------------------------------------------TTTTAA-A-CA-T----------C-ATA--------TTCTATG-TTT-TGTTGTcaataatt-ac-a
i Peromyscus_maniculatus.KI615458.1                     I 8 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    17936 58 -     36578 --------------------------------C-TAACC----T-AA--------GTG--TA--GTATGA-A-T--T----------TTATACA-A----TGACATA-TTT-TTGCATTAATAATT-GT-A
i Petromus_typicus.PetTyp_scaffold_33007                I 13 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              4740 70 +      8220 -----TA----TGTTC-TTTGTTG-AAG----T-GAAGC----T-AT--------TTA--TA--TTCTAA-A-CT-T----------T-A----------TGCTATG-TTT-TTACATTAATAATT-AT-A
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Piliocolobus_badius.k141_1987485                           4945 77 -      5908 TCA-TTA----CATTC-TT--TCC-GAA----T-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-C
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       5564 77 -     17985 TCA-TTA----CATTC-TT--TCC-GAA----T-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-C
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            4931 77 +      7694 TCA-TTA----CATTC-TT--TCT-GAA----T-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-C
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26743414 77 +  26888534 TCA-TTA----CATTC-TT--TCC-GAA----T-GAAAC----T-AT--------TTA--CA--TTATAA-A-CG-T----------T-GTCGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-C
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306           101374 41 +    112873 ----------------------------------------------------------------TTCTAA-A-TT-T----------T-ATAGATA----AGCTATG-CTT-TTGCATTAATAAT------
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        I 23 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990          11222 70 +     21690 -----TA----TGTTC-TTTGTCC-AAG----T-GAAAC----T-AT--------TTA--TA--TTCTAA-A-CT-T----------T-A----------TACTATG-TTT-TTACATTAATAATT-AT-A
i Platanista_gangetica.PlaMin_flattened_line_72990      I 4 C 0
s Plecturocebus_bernhardi.k141_959214                       27073 56 +     44506 ------------------------------------AAC----T-AT--------TTA--TA--TTATAA-A-CT-T----------T-GCAAGGA----CACTATG-CTT-TTGCATTCATAATT-CT-C
i Plecturocebus_bernhardi.k141_959214                   I 17 C 0
s Plecturocebus_brunneus.k141_498086                        27286 56 +     67491 ------------------------------------AAC----T-AT--------TTA--TA--TTATAA-A-CT-T----------T-GCAAGGA----CACTATG-CTT-TTGCATTCATAATT-CT-C
i Plecturocebus_brunneus.k141_498086                    I 17 C 0
s Plecturocebus_caligatus.k141_2539816                      17525 56 -     98129 ------------------------------------AAC----T-AT--------TTA--TA--TTATAA-A-CT-T----------T-GCAAGGA----CACTATG-CTT-TTGCATTCATAATT-CT-C
i Plecturocebus_caligatus.k141_2539816                  I 17 C 0
s Plecturocebus_cinerascens.k141_744510                     27126 56 +    147771 ------------------------------------AAC----T-AT--------TTA--TA--TTATAA-A-CT-T----------T-GCAAGGA----CACTATG-CTT-TTGCATTCATAATT-CT-C
i Plecturocebus_cinerascens.k141_744510                 I 17 C 0
s Plecturocebus_cupreus.k141_1145860                         3761 56 -     43940 ------------------------------------AAC----T-AT--------TTA--TA--TTATAA-A-CT-T----------T-GCAAGGA----CACTATG-CTT-TTGCATTCATAATT-CT-C
i Plecturocebus_cupreus.k141_1145860                    I 17 C 0
s Plecturocebus_dubius.k141_3565563                          7844 56 -     55515 ------------------------------------AAC----T-AT--------TTA--TA--TTATAA-A-CT-T----------T-GCAAGGA----CACTATG-CTT-TTGCATTCATAATT-CT-C
i Plecturocebus_dubius.k141_3565563                     I 17 C 0
s Plecturocebus_grovesi.k141_242819                         27198 56 +    152463 ------------------------------------AAC----T-AT--------TTA--TA--TTATAA-A-CT-T----------T-GCAAGGA----CACTATG-CTT-TTGCATTCATAATT-CT-C
i Plecturocebus_grovesi.k141_242819                     I 17 C 0
s Plecturocebus_hoffmannsi.k141_985533                       5006 55 -    119457 ------------------------------------AAC----T-AT--------TTA--TA--TTATAA-A-CT-T----------T-GCAAGGA----CACTATG-CTT-T-GCATTCATAATT-CT-C
i Plecturocebus_hoffmannsi.k141_985533                  I 17 C 0
s Plecturocebus_miltoni.k141_841561                         16920 56 +    134592 ------------------------------------AAC----T-AT--------TTA--TA--TTATAA-A-CT-T----------T-GCAAGGA----CACTATG-CTT-TTGCATTCATAATT-CT-C
i Plecturocebus_miltoni.k141_841561                     I 17 C 0
s Plecturocebus_moloch.k141_890597                          27508 56 -     75465 ------------------------------------AAC----T-AT--------TTA--TA--TTATAA-A-CT-T----------T-GCAAGGA----CACTATG-CTT-TTGCATTCATAATT-CT-C
i Plecturocebus_moloch.k141_890597                      I 17 C 0
s Pongo_abelii.NDHI03003816.1                              192117 78 -    373494 TCA-TTA----CATTC-TT--TCC-TAA----C-TAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTTGATA----TGCTATG-CTT-TTGCATTAATAATT-CT-C
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19812764 79 +  19899266 TCA-TTA----CATTC-TT--TCC-TAA----C-TAAAC----T-AT--------TTA--CA--TTATAA-ATCT-T----------T-GTTGATA----TGCTATG-CTT-TTGCATTAATAATT-CT-C
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               8689 77 -     15069 TCA-TTA----CATTC-TT--TCC-AAA----T-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-C
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              8804 77 +     14865 TCA-TTA----CATTC-TT--TCC-AAA----T-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-C
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                4958 35 -      9567 ---------------------------------------------------------------------------------------T-ACTGGTA----TGACATG-GTT-TTTCATTAGTAATT-AT-A
i Procavia_capensis.ProCapCap_scaffold_149274           I 35 C 0
s Prolemur_simus.MPIZ01000048.1                           6853742 49 +  12164890 --------------------------------------------------------TA--TA--TTATAA-A-CT-T----------T-ATTGATA----AGCTATG-gtt-ttgaataaatgatt-at-a
i Prolemur_simus.MPIZ01000048.1                         I 25 C 0
s Propithecus_coquerelli.NW_012147863.1                     22553 46 -     30946 -------------------------------------------------------------N--NNNNNN-N-NN-N----------N-NNNNNNN----NNNNNNN-NNN-NNNNNNNNNNNNNN-NN-N
i Propithecus_coquerelli.NW_012147863.1                 I 28 C 0
s Propithecus_coronatus.k141_1353159                         8853 46 +     11805 -------------------------------------------------------------A--TTGTAA-A-CT-T----------T-ATTGATA----TGCTATG-CTT-TTGAATTAATAATT-AT-A
i Propithecus_coronatus.k141_1353159                    I 32 C 0
s Propithecus_diadema.k141_577245                           48187 46 +     52369 -------------------------------------------------------------A--TTATAA-A-CT-G----------T-ATTGATA----TATTATG-CTT-TTGAATTAATAATT-AT-A
i Propithecus_diadema.k141_577245                       I 32 C 0
s Propithecus_edwardsi.k141_1317105                         40574 46 -     44753 -------------------------------------------------------------A--TTATAA-A-CT-T----------T-ATTGATA----TACTATG-CTT-TTGAATTAATAATT-AT-A
i Propithecus_edwardsi.k141_1317105                     I 32 C 0
s Propithecus_perrieri.k141_7554                            22497 46 +     27322 -------------------------------------------------------------A--TTATAA-A-CT-G----------T-ATTGATA----TACTATG-CTT-TTGAATTAATAATT-AT-A
i Propithecus_perrieri.k141_7554                        I 32 C 0
s Propithecus_tattersalli.k141_907138                       22142 46 -     53241 -------------------------------------------------------------A--TTATAA-A-CT-T----------T-ATTGATA----TGCTATG-CTT-CTGAATAAATAATT-AT-A
i Propithecus_tattersalli.k141_907138                   I 32 C 0
s Propithecus_verreauxi.k141_158021                         44405 46 -     48185 -------------------------------------------------------------A--TTATAA-A-CT-T----------T-ATTGATA----TGCTATG-CTT-CTGAATAAATAATT-AT-A
i Propithecus_verreauxi.k141_158021                     I 32 C 0
s Psammomys_obesus.NESX01026517.1                           40133 85 +     77221 TGA-GTA----TATTC-TT--CCC-AAA----C-tggac----a-gtattttttttaa--ta--ttttaa-a-ca-t----------t-gta----CATATTCTATG-TTT-CAATGTCAATAATT-AC--
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            7926 69 -     27784 -----TA----TGTTC-TT--tcc-aag----t-gaaaa----a-at--------ata--ta--ttttac-a-ta-t----------t-atagaTA----TGCTAT--CTT-TGGCATTAATAAT------
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        252070 51 -    344369 -----TA----TGTTC-TT--TCC-AAG----T-GAAGG----T-AT--------TTA--TA--TTCTAA-A-CT-T----------T-ATAGATA----TACA---------------------------
i Pteronura_brasiliensis.PteBra_flattened_line_1343     I 4 I 9
s Pteropus_alecto.KB031157.1                             13248735 74 -  17261082 -----TA----TGTTC-TT--TCC-AAG----T-GAAAC----T-ac--------tta--ta--ttctaa-a-tt-t----------t-aaagata----tgctATG-CTT-Ttgcattaataatt-at-a
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             606685 74 -   3946241 -----TA----TGTTC-TT--TCC-AAG----T-GAAAC----T-ac--------tta--ta--ttctaa-a-tt-t----------t-aaagata----tgctATG-CTT-Ttgcattaataatt-at-a
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131541658 32 - 161321710 -------------------------------------ac----t-at--------tta--tg--ttttaa-a-at-t----------t-atagata----TGCA---------------------------
i Puma_concolor.QAVW01000427.1                          I 19 I 25
s Pygathrix_cinerea.k141_374971                             32795 77 +     56732 TCA-TTA----CATTC-TT--TCC-AAA----T-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCGCTT----TGCTATG-CTT-TT-CATTAATAATT-CT-C
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6809292 77 +   6970761 TCA-TTA----CATTC-TT--TCC-AAA----T-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCGCTT----TGCTATG-CTT-TT-CATTAATAATT-CT-C
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             8681 77 +     18040 TCA-TTA----CATTC-TT--TCC-AAA----T-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCGCTT----TGCTATG-CTT-TT-CATTAATAATT-CT-C
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                22627 70 +     68503 -----TA----TGTTC-TTTGTCC-AAG----T-GAAAC----T-AT--------TTA--TA--CCCTAA-A-CT-T----------T-A----------TGCTATG-CTT-TTATGTTAATAATT-AC-A
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 4 C 0
s Rattus_norvegicus.chr11                                13918741 78 +  90463843 TGA-ATA----TATCC-TT--TAC-AAA----G-TGGAG----A-TA--------TTA--TA--TGCTAC-A-CA-C----------T-ATC----CACGTTCTATG-TTT-TCTTGTTAATAATT-Gc-a
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1794562 74 +   2252614 -----TA----TGTTC-TT--CCC-AAG----T-GAAAC----T-AT--------TTA--TA--TCCTAA-G-TT-T----------T-ACAGTTA----TGTGGTA-CTT-TTGCATTTATAATT-AT-A
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                            3060 77 -     17045 TCA-TTA----CATTC-TT--TCC-AAA----T-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-C
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206380547 77 - 206558726 TCA-TTA----CATTC-TT--TCC-AAA----T-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCAATA----TGCTATG-CTT-TT-CATTAATAATT-CT-C
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44859450 77 -  45163003 TCA-TTA----CATTC-TT--TCC-AAA----T-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-C
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                22080 74 +    109198 -----TA----TGTTC-TT--TCC-AAG----T-GAAAC----T-AC--------TTA--TA--TTCTAA-A-TT-T----------T-AAAGATA----TGCTATG-CTT-TTGCATTAGTAATT-AT-A
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                      3310 57 -      4338 -----TA----TGTTC-TTTGTCC-AAG----T-GAAAC----T-AT--------TTA--TA--CTCTAA-A-CT-T----------T-A----------TGCTATG-CTT-TTGT---------------
i Saiga_tatarica.SaiTat_scaffold_371890                 I 4 C 0
s Saimiri_boliviensis.NW_024100938.1                     15677530 47 -  43202129 ------------------------------------------------------------TA--TTATAA-A-CT-T----------T-GTCAAGA----TGCTATG-CTT-TTGCCTTAATAATT-CT-C
i Saimiri_boliviensis.NW_024100938.1                    I 20 C 0
s Saimiri_cassiquiarensis.k141_808270                        9444 47 +     34089 ------------------------------------------------------------TA--TTATAA-A-CT-T----------T-GTCAAGA----TGCTATG-CTT-TTGCCTTAATAATT-CT-C
i Saimiri_cassiquiarensis.k141_808270                   I 20 C 0
s Saimiri_macrodon.k141_2087127                              9383 47 -     60842 ------------------------------------------------------------TA--TTATAA-A-CT-T----------T-GTCAAGA----TGCTATG-CTT-TTGCCTTAATAATT-CT-C
i Saimiri_macrodon.k141_2087127                         I 20 C 0
s Saimiri_oerstedii.k141_841116                              9477 47 +     67014 ------------------------------------------------------------TA--TTATAA-A-CT-T----------T-GTCAAGA----TGCTATG-CTT-TTGCCTTAATAATT-CT-C
i Saimiri_oerstedii.k141_841116                         I 20 C 0
s Saimiri_sciureus.k141_1947592                              9454 47 +     60816 ------------------------------------------------------------TA--TTATAA-A-CT-T----------T-GTCAAGA----TGCTATG-CTT-TTGCCTTAATAATT-CT-C
i Saimiri_sciureus.k141_1947592                         I 20 C 0
s Saimiri_ustus.k141_1282476                                 9391 47 -     76454 ------------------------------------------------------------TA--TTATAA-A-CT-T----------T-GTCAAGA----TGCTATG-CTT-TTGCCTTAATAATT-CT-C
i Saimiri_ustus.k141_1282476                            I 20 C 0
s Sapajus_apella.ctg10                                   17346152 56 -  30362882 ------------------------------------AAC----T-AT--------TTA--TA--TTACAA-A-CT-T----------T-GTCAAGA----TGCTATG-CTT-TTGCATTAATAATT-CT-C
i Sapajus_apella.ctg10                                  I 17 C 0
s Sapajus_macrocephalus.k141_966464                         25473 56 -     62485 ------------------------------------AAC----T-AT--------TTA--TA--TTATAA-A-CT-T----------T-GTCAAGA----TGCTATG-CTT-TTGCATTAATAATT-CT-C
i Sapajus_macrocephalus.k141_966464                     I 17 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   41393 35 -    114521 ---------------------------------------------------------------------------------------T-ACAGATA----TGCTATG-CTT-TTGCATTAATAATT-AT-A
i Scalopus_aquaticus.ScaAqu_scaffold_9300               I 38 C 0
s Semnopithecus_entellus.k141_1572367                        6296 77 +     15331 TCA-TTA----CATTC-TT--TCC-AAA----T-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-T
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      11671 77 +     20762 TCA-TTA----CATTC-TT--TCC-AAA----T-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-T
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         121675 77 +    130994 TCA-TTA----CATTC-TT--TCC-AAA----T-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-T
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           40455 77 +     46263 TCA-TTA----CATTC-TT--TCC-AAA----T-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-T
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     33600 77 +     42640 TCA-TTA----CATTC-TT--TCC-AAA----T-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-T
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        16622 77 +     30600 TCA-TTA----CATTC-TT--TCC-AAA----T-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-T
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  106644 74 -    120886 CGA-GCA----CATTC-TT--CCC-AAA----C-TACAA----C-AT--------TGA--TA--TTTTAA-A-CA-T----------T-ATA--------GTCTATC-TTT-TGTTGTCAATAATT-GC-A
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            26012 74 +    739146 -----TA----TGTTC-CT--TCC-AAG----C-AAAAC----T-AT--------TTA--TA--TACTAA-A-CT-T----------T-ATAGATA----TGCTATG-CTC-CTATATTAATAATT-AT-A
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17776335 78 -  27805282 -----TCAATGTGTTC-TT--TCC-AAG----c-aaaac----ttat--------tta--ta--ttttaa-g-ca-t----------t-GTAGATA----TACTATG-CT--TTGCATTAATAATT-AT-A
i Sorex_araneus.JH798170.1                              I 6 C 0
s Spermophilus_dauricus.KZ294190.1                        2245012 76 +   2842873 TCA-TCA----CATTC-TT--TCC-CAA----C-TAAAC----t-at--------gtg--ta--ttttaa-a-ct-t----------t-atagaTA----T--GCTC-TTT-TTGCATAAATAATT-AT-G
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             240847 51 -    276980 -----TA----TGTTC-TT--TCC-AAA----T-GAAGC----T-AT--------TTA--TA--TTCTAA-A-TT-T----------T-ATAGACA----TACA---------------------------
i Spilogale_gracilis.SpiGra_flattened_line_905          I 4 I 12
s Suricata_suricatta.SurSur_flattened_line_20339            35044 51 +     62062 -----TA----TGTTC-TT--TCC-AAG----T-GAAAC----T-AT--------TTA--TA--TTATAA-A-CT-T----------T-ATAGATA----TACA---------------------------
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 I 12
s Sus_scrofa.CM000824.4                                 189277046 68 + 218635234 -----TG----TGTTC-TT--TCC-AAG----T-GAAAC----T-AC--------TTC--TG--TTCTAA-A-CT-T----------T-A----------TGCTATG-CTT-TTGCGTCAATAATT-AT-A
i Sus_scrofa.CM000824.4                                 I 4 C 0
s Symphalangus_syndactylus.tarseq_24                        19797 78 -  13920577 TTA-TTA----CATTC-TT--TCC-TAA----C-TAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCAATA----TGCTATG-CTT-TTGCATTAATAATT-CT-C
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                4189 70 +     20549 -----TA----TGTTC-TT--CCT-AAG----T-GAAAA----T-AT--------TTA--TA--TTCTGA-A-TT-T----------T-ATAGATA----TGTAATC-CTT-CTGCACTAATGAT------
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               18282 69 +     45698 -----CA----CATTC-TT--TCC-AAA----T-GAAAC----T-AT--------TTA--TA--TTATAA-A-TT-T----------T-A----TA----TTCAATC-CTT-TTGCATTAATAATT--T-A
i Tamandua_tetradactyla.TamTet_scaffold_26877           I 4 C 0
s Tapirus_indicus.TapInd_scaffold_176                      812636 71 +   1148477 -----TG----TGTTC-TT--TCC-AAG----C-AAAAC----T-AT--------TTA--TA--TTCTAA-A-CT-T----------T-ATAGATA----TGCTAGG-CTT-CTGCATTA---ATT-AT-A
i Tapirus_indicus.TapInd_scaffold_176                   I 4 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  63278 71 +     99546 -----TA----TGTTC-TT--TCC-AAG----C-AAAAC----T-AT--------TTA--TA--TTCTAA-A-CT-T----------T-ATAGATA----TGCTAGG-CTT-CTGCATTA---ATT-AT-A
i Tapirus_terrestris.TapTer_scaffold_14939              I 4 C 0
s Theropithecus_gelada.CM009951.1                       194012920 77 - 194193292 TCA-TTA----CATTC-TT--TCC-AAA----C-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-C
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                  1466 68 -      3104 -----CA----CATTC-TT--CCC--AA----C-TAAAG----T-AT--------TTA--TA--GTATAA-A-CT-T----------T-A----TA----TTCTATT-CCT-TTTCATTAATAATT--T-A
i Tolypeutes_matacus.TolMat_scaffold_475685             I 4 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  139932 70 -    259118 -----TA----TGTTC-TT--TCA-AAG----T-GAAAC----T-AT--------ATA--TA--TTTTAC-A-TT-T----------T-ATAGCTA----TGCTATG-CTT-TGGCATTAACAAT------
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        29943 77 +     38948 TCA-TTA----CATTC-TT--TCC-AAA----T-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTTGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-T
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   23503 77 -     32910 TCA-TTA----CATTC-TT--TCC-AAA----T-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-T
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      5404 77 -     12939 TCA-TTA----CATTC-TT--TCC-AAA----T-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTTGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-T
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       4832 77 -     14244 TCA-TTA----CATTC-TT--TCC-AAA----T-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-T
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           46225 77 -     54611 TCA-TTA----CATTC-TT--TCC-AAA----T-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-T
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        4026 77 -     11566 TCA-TTA----CATTC-TT--TCC-AAA----T-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTTGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-T
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     6210 77 -     15592 TCA-TTA----CATTC-TT--TCC-AAA----T-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-T
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          4862 77 +     14371 TCA-TTA----CATTC-TT--TCC-AAA----T-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-T
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   3148 77 +     12481 TCA-TTA----CATTC-TT--TCC-AAA----T-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-T
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        3129 77 -     24393 TCA-TTA----CATTC-TT--TCC-AAA----T-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-T
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       8273 77 -     28054 TCA-TTA----CATTC-TT--TCC-AAA----T-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-T
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44663057 77 -  44834318 TCA-TTA----CATTC-TT--TCC-AAA----T-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-T
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       5369 77 +     13828 TCA-TTA----CATTC-TT--TCC-AAA----T-GAAAC----T-AT--------TTA--CA--TTATAA-A-CT-T----------T-GTCGATA----TGCTATG-CTT-TT-CATTAATAATT-CT-T
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                  10795 70 +     90398 -----TA----TGTTC-TTTGTCC-AAG----T-GAAGC----T-AT--------TTA--TA--TTCTAA-A-CT-T----------T-A----------TGTAATG-CTT-TTACATTAATAATT-AT-A
i Tragulus_javanicus.TraJav_scaffold_14717              I 4 C 0
s Trichechus_manatus.JH594618.1                          16090830 54 +  31416278 --------------------------------------C----T-GT--------TTA--CT--TTCTAA-A-CT-T----------T-ACTGATA----CGATGTG-CTT-TTGCATTAATAACT-AT-A
i Trichechus_manatus.JH594618.1                         I 20 C 0
s Tupaia_chinensis.KB320831.1                             2802079 56 -   3938065 ----------------------------------TCAAT----T-A---------TTA--TG--TTC-AA-G-CT-T----------T-ATAGATA----TGCTAta-ctt-ttacatttataatt-at-a
i Tupaia_chinensis.KB320831.1                           I 18 T 3315
s Tupaia_tana.TupTan_flattened_line_68454                   10907 56 +     13056 ----------------------------------CCAAT----T-A---------TTA--TA--TTC-AA-G-CT-T----------T-ATAGATA----TGCTATA-CTT-TTACATTTATAATT-AT-A
i Tupaia_tana.TupTan_flattened_line_68454               I 18 C 0
s Tursiops_truncatus.MRVK01000923.1                      69319010 70 -  96451834 -----TA----TGTTC-TCTGTCG-AAG----T-GAACC----T-AT--------TTA--TA--TTCTAA-A-CG-T----------T-A----------TGCTATG-TTT-Ttacattaataatt-at-a
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                    1747 38 +    136657 -----TA----TCTTC-TT--TTC-AAG----A-AAAAC----T-AT--------TTA--TA--ATCTAA-A-CT--------------------------------------------------------
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 I 35
s Ursus_maritimus.KK498671.1                              6522495 51 +  28682327 -----TT----TGTTC-TT--TCC-AAG----T-GAAGC----T-AT--------TTA--TA--TTCTAA-A-CT-T----------T-ATAGata----tata---------------------------
i Ursus_maritimus.KK498671.1                            I 4 I 12
s Varecia_rubra.k141_432109                                 10386 78 -     20643 TCA-GCA----CATTC-TT--TCC-AAA----G-TAAAC----T-AT--------TTA--TA--TTATAA-A-CT-T----------T-ATTGATA----TGCTATG-CTT-TTGAATTAATGATT-AT-A
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             29921 78 -     33872 TCA-GCA----CATTC-TT--TCC-AAA----G-TAAAC----T-AT--------TTA--TA--TTATAA-A-CT-T----------T-ATTGATA----TGCTATG-CTT-TTGAATTAATGATT-AT-A
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1530041 68 -   2331223 -----TA----TGTTC-TT--TCC-AAG----T-GAAAC----T-AT--------TTA--TA--TTCTCA-A-CT-T----------T-A----------TGCTATG-CTT-TTGCATTAATAATT-AT-A
i Vicugna_pacos.KN269600.1                              I 4 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                146163 51 -    281493 -----TA----TGTTC-TT--TCC-AAG----T-GAAGC----T-AT--------TTA--TA--TTCTTA-A-TT-T----------T-ATAGACA----TACA---------------------------
i Vulpes_lagopus.VulLag_flattened_line_2045             I 4 I 12
s Xerus_inauris.XerIna_scaffold_7898                       132508 76 -    134049 TCA-TCA----CATTC-TT--TCC-CAA----C-TAAAC----T-AT--------GTG--TA--TTTTAA-A-CT-T----------T-ATCAATA----T--GCTG-TTT-TTGCATTAATAATT-AT-G
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_202118                     2184 15 -      3360 -------------------------------------------------------------------------------------------------------TATG-TTT-C---------AGTT-AT-C
i Zapus_hudsonius.ZapHud_scaffold_202118                I 11 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        221618 36 -    227762 -----TA----TGTTC-TT--TCC-AAG----T-GAAGC----T-AT--------TTA--TA--TTCTAA-A-----------------------------------------------------------
i Zalophus_californianus.ZalCal_flattened_line_4097     I 4 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            3599 70 -     13665 -----TA----TGTTC-TTTGTCC-AAG----T-GAAGC----T-AT--------TTA--TA--TTCTAA-A-CT-T----------T-A----------TGCTATG-TTT-TTACATTAATAATT-AT-A
i Ziphius_cavirostris.ZipCav_flattened_line_60625       I 8 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Hylobates_pileatus_a.tarseq_592                             37267 2881 -     60944 I
e Tarsius_wallacei.k141_48636                               64696  0 +     65473 C
e Tarsius_lariang.k141_609102                               31387  0 +     42269 C
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Cephalopachus_bancanus.k141_702587                        12545  0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530  0 +    345090 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               18588 30 +    209709 A-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
s Acinonyx_jubatus.LLWD01000356.1                         2041347 40 +   3721120 A-TGCAAAAGCATA----GCA---------------TA--C-TTCT-TG----TGAATC---CATGAA--AAC--
i Acinonyx_jubatus.LLWD01000356.1                       I 12 I 4
s Acomys_cahirinus.AcoCah_scaffold_1625                    119060 47 -    189883 A-A---------------TTT-ATAATAATTTTTG-TT--T-CATT-TTACAATATATG---CATGAA--AAC-T
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10665291 40 +  23371972 a-tgcaAAAGCATA----GCA---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC--
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 12 I 4
s Ailurus_fulgens.LNAC01000003.1                          7102239 40 -  16596857 G-TGCAAAAGCATA----GCA---------------TC--T-CATT-TG----TGACTA---CATGAA--AGC--
i Ailurus_fulgens.LNAC01000003.1                        I 12 I 4
s Allactaga_bullata.AllBul_scaffold_141108                   2429 30 -      7259 A-A---------------GTA---------------TC--T-CATT-TG----GAAATG---TATGGA--AAG-G
i Allactaga_bullata.AllBul_scaffold_141108              I 37 C 0
s Allenopithecus_nigroviridis.k141_2469532                   6474 30 -     60446 A-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         7188 30 -     29318 A-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CCTGAA--AAC-T
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         6126 30 +     38766 A-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CCTGAA--AAC-T
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          7084 30 -     80423 A-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CCTGAA--AAC-T
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              2032 30 +     19852 A-T---------------GTA---------------TC--T-CATT-TG----TGAATA---CATGAA--AAA-T
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                4252 30 -     12443 A-T---------------GTA---------------TC--T-CATT-TG----TGAATA---CATGAA--AAA-C
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                             1575 30 +      5070 A-T---------------GTA---------------TC--T-CATT-TG----TGAATA---CATGAA--AAA-T
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                 1322 30 -      1641 A-T---------------GTA---------------TC--T-CATT-TG----TGAATA---CATGAA--AAA-T
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          4061 30 -     24210 A-T---------------GTA---------------TC--T-CATT-TG----TGAATA---CATGAA--AAA-C
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_494922                              565 30 -      8325 A-T---------------GTA---------------TC--T-CATT-TG----TGAATA---CATGAA--AAA-T
i Alouatta_nigerrima.k141_494922                        C 0 C 0
s Alouatta_palliata.k141_405616                              6479 30 +     16794 A-T---------------GTA---------------TC--T-CATT-TG----TGAATA---CATGAA--AAA-C
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_347198                              508 30 +      9111 A-T---------------GTA---------------TC--T-CATT-TG----TGAATA---CATGAA--AAA-T
i Alouatta_puruensis.k141_347198                        C 0 C 0
s Alouatta_seniculus.k141_790278                             5756 30 -      9835 A-T---------------GTA---------------TC--T-CATT-TG----TGAATA---CATGAA--AAA-T
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3528503 29 +   4113121 A-T---------------GTT---------------CC--T-TATT-TG----TAAATA---CATGAA--AAC--
i Ammotragus_lervia.NIVO01013474.1                      C 0 I 4
s Antilocapra_americana.AntAmePen_scaffold_27338             5666 29 +     55446 A-T---------------GTT---------------TC--T-CATT-TG----TAAATA---CATGAA--AAC--
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 I 4
s Aotus_azarae.k141_3170768                                 67365 30 +     78111 A-C---------------GTA---------------TC--T-CATT-TG----TGAATA---CATGAA--AAA-T
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                           10309 30 +     22701 A-T---------------GTA---------------TC--T-CATT-TG----TGAATA---CATGAA--AAA-T
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5754276 30 +   9889416 A-C---------------ATA---------------TC--T-CATT-TG----TGAATA---CATGAA--AAA-T
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                            10853 30 -    104377 A-C---------------GTA---------------TC--T-CATT-TG----TGAATA---CATGAA--AAA-T
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                              10882 30 +     23246 A-C---------------GTA---------------TC--T-CATT-TG----TGAATA---CATGAA--AAA-T
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     3518 30 +     11424 A-T---------------GTG---------------TT--T-CACT-TG----TGAATA---CATGAA--AAC-T
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        7455 30 +      9265 A-T---------------GTG---------------TC--T-CATT-CA----CAAGAA---CATGAA--AAC-T
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9544166 30 +  39197703 A-T---------------GTA---------------TC--T-CATT-TG----TGAATA---CATGAA--AAA-T
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             65440 30 +     85812 A-T---------------GTA---------------TC--T-CATT-TG----TGAATA---CATGAA--AAA-T
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                16450 30 +     89302 A-T---------------GTA---------------TC--T-CATT-TG----TGAATA---CATGAA--AAA-T
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             20954 30 -     58268 A-T---------------GTA---------------TC--T-CATT-TG----TGAATA---CATGAA--AAA-T
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             68948 30 +    119057 A-T---------------GTA---------------TC--T-CATT-TG----TGAATA---CATGAA--AAA-T
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              10917 30 -     25888 A-T---------------GTA---------------TC--T-CATT-TG----TGAATA---CATGAA--AAA-T
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                11991 30 -     16375 A-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               5607 30 +      6337 A-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26385893 29 +  51448160 a-t---------------gta---------------cC--T-CATT-CG----TGAATA---CATGAA--AAC--
i Balaenoptera_acutorostrata.KI537095.1                 C 0 I 4
s Balaenoptera_bonaerensis.DF502048.1                       11066 29 -     13118 a-t---------------gta---------------cC--T-CATT-CG----TGAATA---CATGAA--AAC--
i Balaenoptera_bonaerensis.DF502048.1                   C 0 I 4
s Beatragus_hunteri.BeaHun_scaffold_21644                   50463 26 -     72089 -------------------GT---------------CC--T-CATT-TG----TAAGTA---CATGAA--AAC--
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 I 4
s Bison_bison.KN264915.1                                   305423 29 -   6870073 G-T---------------gtt---------------cc--t-catt-tg----taaata---cATGAA--AAC--
i Bison_bison.KN264915.1                                C 0 I 4
s Bos_indicus.CM003021.1                                 22959529 29 + 161108492 G-t---------------gtt---------------cc--t-catt-tg----taaata---cATGAA--AAC--
i Bos_indicus.CM003021.1                                C 0 I 4
s Bos_mutus.JH883513.1                                     421708 29 +    998990 G-t---------------gtt---------------cc--t-catt-tg----taaata---cATGAA--AAC--
i Bos_mutus.JH883513.1                                  C 0 I 4
s Bos_taurus.CM000177.6                                  22668181 29 + 158972876 G-t---------------gtt---------------cc--t-catt-tg----taaata---caTGAA--AAC--
i Bos_taurus.CM000177.6                                 C 0 I 4
s Bubalus_bubalis.KI419065.1                               677019 29 +   1914593 a-t---------------gtt---------------cc--t-catt-tg----taaata---caTGAA--AAC--
i Bubalus_bubalis.KI419065.1                            C 0 I 4
s Cacajao_ayresi.k141_724503                               118786 30 -    171031 A-T---------------GTA---------------TC--T-CATT-TG----TGAATA---CATGAA--AAA-T
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 17806 30 +    125063 A-T---------------GTA---------------TC--T-CATT-TG----TGAATA---CATGAA--AAA-T
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                19853 30 -    216513 A-T---------------GTA---------------TC--T-CATT-TG----TGAATA---CATGAA--AAA-T
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       12396 30 -    134917 A-T---------------GTA---------------TC--T-CATT-TG----TGAATA---CATGAA--AAA-T
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3225001 29 -   8989139 A-T---------------GTA---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC--
i Camelus_bactrianus.KN276303.1                         C 0 I 4
s Camelus_dromedarius.KN271192.1                           402701 29 -  15254737 a-t---------------gta---------------tC--T-CATT-TG----TGAATA---CATGAA--AAC--
i Camelus_dromedarius.KN271192.1                        C 0 I 4
s Camelus_ferus.KB016973.1                                2978439 29 +   6889770 a-t---------------gta---------------tC--T-CATT-TG----TGAATA---CATGAA--AAC--
i Camelus_ferus.KB016973.1                              C 0 I 4
s CanFam4.chr31                                          11528142 40 +  39901454 A-TGCAAAAGCATA----GCG---------------TC--T-TAAT-TG----TGAATA---CATGAA--AAC--
i CanFam4.chr31                                         I 12 I 4
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   23116 40 +     87036 A-TGCAAAAGCATA----GCG---------------TC--T-TAAT-TG----TGAATA---CATGAA--AAC--
i Canis_lupus_VD.CanFam_VD_scaffold_16982               I 12 I 4
s Canis_lupus_dingo.QKWQ01001993.1                       11275039 40 -  35597290 a-tgCAAAAGCATA----GCG---------------TC--T-TAAT-TG----TGAATA---CATGAA--AAC--
i Canis_lupus_dingo.QKWQ01001993.1                      I 12 I 4
s Canis_lupus_familiaris.chr31                           11097536 40 +  39895921 a-tgCAAAAGCATA----GCG---------------TC--T-TAAT-TG----TGAATA---CATGAA--AAC--
i Canis_lupus_familiaris.chr31                          I 12 I 4
s Canis_lupus_orion.HG994411.1                           16464321 40 -  44759192 a-tgCAAAAGCATA----GCG---------------TC--T-TAAT-TG----TGAATA---CATGAA--AAC--
i Canis_lupus_orion.HG994411.1                          I 12 I 4
s Capra_aegagrus.CM003214.1                              21335936 29 + 157394656 A-T---------------GTT---------------CC--T-TATT-TG----TAAATA---CATGAA--AAC--
i Capra_aegagrus.CM003214.1                             C 0 I 4
s Capra_hircus.CM004562.1                               135714289 29 - 157403528 A-T---------------GTT---------------CC--T-TATT-TG----TAAATA---CATGAA--AAC--
i Capra_hircus.CM004562.1                               C 0 I 4
s Capromys_pilorides.CapPil_scaffold_780116                   522 31 +      1571 A-T---------------GCA---------------TGN-T-TCTT-TG----AGGATA---CCTGAA--CAC-T
i Capromys_pilorides.CapPil_scaffold_780116             C 0 C 0
s Castor_canadensis.CasCan_scaffold_1326                     1001 30 -    202837 A-C---------------GTG---------------TT--T-CATT-TG----GGAATG---CATGAA--AAC-T
i Castor_canadensis.CasCan_scaffold_1326                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   164740 29 -    276539 A-T---------------GTA---------------TT--T-CATT-TG----TGAATA---CATGAA--AAC--
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 I 4
s Cavia_aperea.AVPZ01000278.1                            15790681 29 -  24422027 ------------------ACT---------------TAN-A-TCTG-TT----CAAATA---CCTGAA--AAC-G
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15802624 31 -  24440124 a-a---------------act---------------taN-A-TCTG-TT----CAAATA---CCTGAA--AAC-A
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       180796 31 +    436027 A-A---------------ACT---------------TAN-A-TCTG-TT----CAAATA---CCTGAA--AAC-A
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18896520 30 -  29618158 A-T---------------GTA---------------TC--T-CATT-TG----TGAATA---CATGAA--AAA-T
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                13170 30 -     26817 A-T---------------GTA---------------TC--T-CATT-TG----TGAATA---CATGAA--AAA-T
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                17414 30 +     25043 A-T---------------GTA---------------TC--T-CATT-TG----TGAATA---CATGAA--AAA-T
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4369974 29 +   7569818 a-t---------------gta---------------tc--t-catT-TG----TGAATA---CGTGAA--AAC--
i Ceratotherium_simum.JH767818.1                        C 0 I 4
s Ceratotherium_simum_cottoni.CerCot_scaffold_171732          131 29 +      8380 A-T---------------GTA---------------TC--T-CATT-TG----TGAATA---CGTGAA--AAC--
i Ceratotherium_simum_cottoni.CerCot_scaffold_171732    C 0 I 4
s Cercocebus_atys.KQ010443.1                              6560414 30 +   6739814 G-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      31891 30 +     60454 G-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          7095 30 -     21101 G-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         64405 30 -    107033 G-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        7265 30 -     17608 A-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          4433 30 +     45019 A-C---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           4709 30 +     15177 A-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          7315 30 +     16677 A-T---------------ATG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           29511 30 +     35983 G-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11996036 30 +  12117833 A-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46483018 30 +  46592721 A-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                       1129 30 -     27215 A-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       7329 30 +     35577 A-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        7123 30 -     25661 A-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        7295 30 -     17744 A-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        26664 30 +     37128 A-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           5689 30 -      6963 A-T---------------GAG---------------AC--T-CCTT-TG----TGAATA---CATGAA--AAC-T
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           64207 30 -     68416 A-C---------------GTG---------------TC--T-CATT-TG----TGACTG---CATGAA--AAC-T
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_854352                             509 30 +     27737 A-T---------------GTG---------------TC--T-CATT-TG----TGACTG---CATGAA--AAC-T
i Cheirogaleus_medius.k141_854352                       C 0 C 0
s Cheracebus_lucifer.k141_619653                            10477 30 -     18223 A-T---------------GTA---------------TC--T-CATT-TG----TGAATA---CATGAA--AAA-T
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              2218 30 +    188999 A-T---------------GTA---------------TC--T-CATT-TG----TGAATA---CATGAA--AAA-T
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           46517 30 +     57117 A-T---------------GTA---------------TC--T-CATT-TG----TGAATA---CATGAA--AAA-T
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          51197 30 +     54541 A-T---------------GTA---------------TC--T-CATT-TG----TGAATA---CATGAA--AAA-T
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15965369 31 +  43084221 a-t---------------gca---------------CAN-T-CCTT-TG----AGAATA---CCTGAA--AAC-T
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         75998 30 +    196370 A-T---------------GTA---------------TC--T-CATT-TG----TGAATA---CATGAA--AAA-T
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          20179 30 +     40510 A-T---------------GTA---------------TC--T-CATT-TG----TGAATA---CATGAA--AAA-T
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15144849 30 -  15256731 A-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CCTGAA--AAC-T
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      39313 30 -     53260 A-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CCTGAA--AAC-T
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101149872 30 + 101219884 A-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CCTGAA--AAC-T
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                19712 30 -     21363 A-T---------------GTG---------------AC--T-CCTT-TA----GGAATA---CATGAA--AAC-T
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           765016 30 +    964067 A-T---------------GTG---------------AC--T-CCTT-TA----GGAATA---CATGAA--AAC-T
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_304221               292 30 -      7053 A-A---------------CAG---------------TC--A-CCAT-TA----TGACTA---CATGAA--AAC-T
i Chrysochloris_asiatica.ChrAsi_scaffold_304221         C 0 C 0
s Colobus_angolensis.KN985967.1                          10889644 30 +  10971483 G-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147667572 30 + 156195979 G-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            19555 30 +     23629 G-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60624000 29 +  78930452 A-T---------------GCC---------------TC--T-CATT-TG----TGAATA---GATGAA--AAC--
i Condylura_cristata.JH655880.1                         C 0 I 4
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         4388 29 -      5782 A-T---------------GCA---------------AC--T-CATT-TG----TGGATA---CATGAA--AGA--
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 I 4
s Cricetomys_gambianus.CriGam_scaffold_949                 283965 47 -    399297 A-A---------------GTG-ATAATACTTTTTG-TT--T-CATT-TTACAATAAATG---CATGAA--AAC-T
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53036283 39 +  72327488 A-A---------------CTTATaa-------g---tt--t-tatt-ttacaataaatg---TATGAA--AAC-T
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              3875 31 -     22648 A-T---------------GCA---------------TT--C-TATT-TG----TGAATA---CATAAAAAAAC--
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 I 4
s Cryptoprocta_ferox.CryFer_flattened_line_19014            59360 39 -     70449 A-TGTAAAAGCATA----GCA---------------TC--G-TACT-TG----TGAAA----AATGAA--AAC--
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 12 I 4
s Ctenodactylus_gundi.CteGun_scaffold_447                  216123 16 -    956709 ------------------------------------------------------TAATA---TATAAA--AAACA
i Ctenodactylus_gundi.CteGun_scaffold_447               I 11 I 7
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 36890 31 -     67205 A-T---------------GTA---------------TGN-T-CCTT-TG----AGGAGA---CTTGAA--CAT-T
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                21874 31 +     26546 A-T---------------ACA---------------TAN-T-CCTT-TG----TAAATA---CCTGAA--AAC-T
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             63022 30 -    236241 A-T---------------ACA---------------TAN-T-CCT--TG----CAAATA---CCTGAA--AAT-T
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          186733 30 -   6883506 A-T---------------ATG---------------AC--T-CCTT-TG----TGAATA---CATGAA--AAC-T
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16850153 30 +  31942871 A-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80042485 29 -  96802777 a-t---------------gta---------------cC--T-CATT-CG----TGAATG---CATGAA--AAC--
i Delphinapterus_leucas.KZ290064.1                      C 0 I 4
s Dicerorhinus_sumatrensis.PEKH010003161.1                 328373 29 +    993696 a-t---------------gta---------------tc--t-caTT-TG----TGAATA---CATGAA--AAC--
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 I 4
s Diceros_bicornis.DicBicMic_scaffold_9545                   9007 29 +    151128 A-T---------------GTA---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC--
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 I 4
s Dinomys_branickii.DinBra_scaffold_1996                   160840 31 +    228994 A-T---------------GCA---------------CAN-T-CCTT-TG----AGAATA---CTTGAA--AAC-T
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3661290 30 +   4240102 a-a---------------ata---------------tt--t-cact-tt----ggAAGG---CATGAA--AAC-T
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  3664 30 -     11986 A-A---------------ATA---------------TT--T-CACT-TT----GGAAGG---CATGAA--AAC-T
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                41583 31 -     73477 A-A---------------ACA---------------TAN-T-TCTT-TT----CAACTA---CCTGAA--AAC-A
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           23002501 30 -  44670279 A-T---------------GTG---------------TC--T-TCTT-TA----TGACCA---CATGAA--AAT-G
i Echinops_telfairi.JH980316.1                          I 19 C 0
s Eidolon_helvum.KE772537.1                                 15098 29 +     24177 a-t---------------gta---------------tc--t-cATT-TG----TGGATA---CATGAA--AAC--
i Eidolon_helvum.KE772537.1                             C 0 I 4
s Elaphurus_davidianus.JRFZ01086400.1                     1498418 29 +   1727528 A-T---------------GTT---------------CC--T-CATT-TG----TAAATA---CATGAA--AAC--
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 I 4
s Elephantulus_edwardii.JH947210.1                        7835253 30 +  15467074 A-T---------------Gtg---------------tt--t-cctt-tg----tgaaaa---taCTAA--AAG-T
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        244963 45 -    369425 A-A---------------ATtacaaaaattt-g---tt--t-tatt-ttacattatatg---aataaa--aat-t
i Ellobius_lutescens.LOEQ01003611.1                     I 28 C 0
s Ellobius_talpinus.LOJH01076532.1                           1315 45 +      9159 A-A---------------ATtacaaaaattt-g---tt--t-tatt-ttgcattctaTG---AATGAA--AAT-T
i Ellobius_talpinus.LOJH01076532.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85879286 40 +  99434291 A-TGCAAAAGCATA----GCA---------------TC--T-CATT-TG----TGACTA---CATGAA--AAC--
i Enhydra_lutris.KZ291749.1                             I 9 I 4
s Equus_asinus.JREZ01000062.1                             5858236 29 -   7175178 a-t---------------gta---------------tc--t-catT-TG----TGAATA---CATGAA--GAC--
i Equus_asinus.JREZ01000062.1                           C 0 I 4
s Equus_caballus.CM000402.2                              13356722 29 +  41866177 a-t---------------gta---------------tc--t-catT-TG----TGAATA---CATGAA--GAC--
i Equus_caballus.CM000402.2                             C 0 I 4
s Equus_przewalskii.ATBW01073585.1                          18212 29 +     92910 a-t---------------gta---------------tc--t-caTT-TG----TGAATA---CATGAA--GAC--
i Equus_przewalskii.ATBW01073585.1                      C 0 I 4
s Erinaceus_europaeus.JH835290.1                         11543391 29 +  16010500 A-T---------------GTG---------------TC--C-TCTT-GG----TGAAGA---CATGAA--AAG--
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48781882 30 -  48907691 A-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CCTGAA--AAC-T
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          320736 29 +    330699 A-T---------------GTA---------------CC--T-CATT-TG----TGAATA---CATGAA--AAC--
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 I 4
s Eubalaena_japonica.EubJap_flattened_line_7756             67192 29 +     89355 A-T---------------GTA---------------CC--T-CATT-CG----TGAATA---CATGAA--AAC--
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 I 4
s Eulemur_albifrons.k141_715837                             10271 30 +     13586 A-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_1015201                              3530 30 -      4292 A-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            16667 30 +     36558 A-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            12989 30 +     60246 A-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                16474 30 +    109717 A-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 4457 30 -     19505 A-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                21132 30 +     27497 A-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           23588 30 +     26808 A-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                38320 30 +     46535 A-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              21061 30 -     29447 A-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129900996 40 - 159252932 A-TGCAAAAGCATA----GCA---------------TA--T-TTCT-TG----TGAATC---CATGAA--AAC--
i Felis_catus.CM001386.2                                I 12 I 4
s Felis_catus_fca126.CM031420.1                         129287973 40 - 158578461 A-TGCAAAAGCATA----GCA---------------TA--T-TTCT-TG----TGAATC---CATGAA--AAC--
i Felis_catus_fca126.CM031420.1                         I 12 I 4
s Felis_nigripes.FelNig_flattened_line_8080                 29163 40 +     52776 A-TGCAAAAGCATA----GCA---------------TA--T-TTCT-TG----TGAATC---CATGAA--AAC--
i Felis_nigripes.FelNig_flattened_line_8080             I 12 I 4
s Fukomys_damarensis.KN123630.1                          13897314 31 -  19261668 A-T---------------GCA---------------TAN-T-CCTT-TG----AGAATA---TATGAA--AAC-T
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     216310 30 -    847004 A-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--TAC-T
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           18672 30 -     43889 A-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--TAC-T
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          15813 30 +     27357 A-C---------------GTG---------------TC--T-CATT-TG----TGAATG---TATGAA--TAC-T
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               160595 30 +    324696 A-T---------------TTG---------------TC--T-CACT-TG----TAAATA---CATGAA--AAC-T
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    188194 19 -    189561 A-T---------------GTT---------------CC--T-CATT-TG----TGAAT-----------------
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 I 6
s Glis_glis.GliGli_scaffold_79770                           17485 30 -     18683 A-T---------------GTG---------------TT--T-CATT-CG----TGAATA---TGTGAA--AAC-T
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                              10285 30 -     14630 A-C---------------GTG---------------TC--T-CATT-TG----TGAATA---CGTGAA--AAC-T
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119657385 30 - 195582420 A-C---------------GTG---------------TC--T-CATT-TG----TGAATA---CGTGAA--AAC-T
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   80803 30 +    118900 G-T---------------GTG---------------TC--T-GATT-TG----AGAATA---TGTGAA--AAC-T
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         7061 30 +     10286 A-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             5542 30 -     11661 A-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                            10866 30 +     56096 A-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        34115 30 -     42470 A-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        50741 30 -     54384 A-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              24477 40 +     53719 A-TGTAAAAGCATA----GTA---------------TC--A-TACT-TG----TGAGTC---CATGAA--AAC--
i Helogale_parvula.HelPar_flattened_line_22962          I 12 I 4
s Hemitragus_hylocrius.HemHyl_scaffold_16669                35327 29 -     91191 A-T---------------GTT---------------CC--T-TATT-TG----TAAATA---CATGAA--AAC--
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 I 4
s Heterocephalus_glaber.JH602058.1                        2561641 31 +  31725842 A-T---------------GCA---------------TAN-T-CCTT-TG----CAAATA---TATGCA--AAC-T
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               63889 30 +     73687 A-T---------------GTA---------------TC--T-CCTT-CC----TGACTA---CAAGAA--AAC-A
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              152541 29 +    277961 A-T---------------GTA---------------TC--T-TATT-CG----TGAATA---CATGAA--AAC--
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 I 4
s Hipposideros_armiger.JXIK01001085.1                      285584 29 -    477199 a-t---------------gta---------------tc--T-CATT-TG----TGGATA---CATGAA--AAC--
i Hipposideros_armiger.JXIK01001085.1                   C 0 I 4
s Hipposideros_galeritus.HipGal_scaffold_52959               3269 29 +     26078 A-A---------------GTA---------------TC--T-CACT-TG----TGGATA---CATGAA--AAC--
i Hipposideros_galeritus.HipGal_scaffold_52959          C 0 I 4
s Hoolock_leuconedys.ctg79                                     10210 30 -   7690867 A-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 24913 40 -     67322 A-TGTA-AA--AT-CATAGTA---------------TC--A-TACT-TG----TGAATC---CATGAA--AAC--
i Hyaena_hyaena.HyaHya_flattened_line_20729             I 12 I 4
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           22227 31 -    119109 A-T---------------ACA---------------TAN-T-TCTT-TG----CAAATA---CCTGAA--AAC-A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_1816750                             2781 30 +      3202 A-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1136966                               790 30 +      9785 A-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Hylobates_agilis.k141_1136966                         C 0 C 0
s Hylobates_klossii.k141_468230                              4270 30 +      5464 A-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14629616 30 -  25970782 A-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            2168 30 +      4161 A-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CAGGAA--AAC-T
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                    10551 32 +     22540 A-T---------------GCA---------------TGNNT-CCTT-TG----GGAATA---CATGAA--AAC-T
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7131387 30 +  13083262 A-T---------------GTg---------------tt--t-caca-ta----aaaata---catgaa--aac-t
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   2603 30 +      3484 A-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              14715 29 +     17520 A-T---------------GTA---------------CC--T-CATT-CG----TGAATA---CATGAA--AAC--
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 I 4
s Jaculus_jaculus.JH725517.1                              8580177 30 +  11848649 A-A---------------GTA---------------TC--T-CATT-TG----GAAATG---CATGAA--AAG-G
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               29332 29 +     37189 A-T---------------GTA---------------CC--T-CACT-CG----TGAATA---CATGAA--AAC--
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 I 4
s Lagothrix_lagothricha.k141_12968                          55038 30 -    147782 A-T---------------GTA---------------TC--T-CATT-TG----TGAATA---CATGAA--AAA-T
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lemur_catta.scaffold_1                                258412419 30 - 285822530 A-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        29747 30 +     39228 A-T---------------GTA---------------TC--T-CATC-TG----TGAATG---CCTGAA--AAC-T
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            59111 30 +     63517 A-T---------------GTA---------------TC--T-CATT-TG----TGAATA---CCTGAA--AAC-T
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        37493 30 -     38897 A-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      3537 30 -     13103 A-T---------------GTA---------------TC--T-CATT-TG----TGAATA---CCTGAA--AAC-T
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3093234 40 -   3498232 A-TGCAAAAGCATA----GCA---------------TC--T-CATT-TG----TGA---ATACATGAA--AAC--
i Leptonychotes_weddellii.KB714749.1                    I 12 I 4
s Lepus_americanus.LepAme_scaffold_62849                    22023 30 +     22452 A-T---------------GTA---------------TC--T-CAGT-TG----TAAATA---CATAAA--AAC-T
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            141642 29 +   3060487 a-t---------------gta---------------CT--T-CATT-CG----TGAATA---CATGAA--AAC--
i Lipotes_vexillifer.KE558548.1                         C 0 I 4
s Lophocebus_aterrimus.ctg55                             19253503 30 +  19376315 G-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           16274 30 +     84689 A-T---------------GTG---------------TC--T-CATC-TG----TGAATA---CATGAA--AAC-T
i Loris_lydekkerianus.k141_550999                       C 0 I 2
s Loris_tardigradus.ctg97                                 3784009 30 +   6799190 A-T---------------GTG---------------TC--T-CATC-TG----TGAATA---CATGAA--AAC-T
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20599810 30 -  62548349 A-T---------------ATG---------------TC--T-CCTT-TG----TGACTA---CATGAA--AAC-T
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11096992 40 +  39895028 a-tgCAAAAGCATA----GCG---------------TC--T-TAAT-TG----TGAATA---CATGAA--AAC--
i Lycaon_pictus.CM007556.1                              I 12 I 4
s Macaca_arctoides.k141_2201161                             25252 30 +     74745 G-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12711715 30 +  12821369 G-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                4288 30 -     26467 G-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           52159 30 +     63263 G-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 4269 30 -     26361 G-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_2667654                                 572 30 -      5626 G-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Macaca_leonina.k141_2667654                           C 0 C 0
s Macaca_maura.k141_251854                                  50688 30 -     79256 G-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196040786 30 + 196197964 G-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11450956 30 +  11645122 G-T---------------GTG---------------TC--T-CACT-TG----TGAATA---CATGAA--AAC-T
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   9642 30 -     46448 G-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                7303 30 -     13212 G-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 20985 30 -     55006 G-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43846407 30 +  43892939 G-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               22269 30 -     24607 G-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               9639 30 -     27140 G-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                703731 26 +    802869 A-T---------------GTA---------------TC--T-CATT-TG----TGGATA---CATGAA-------
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43442675 30 -  43563597 G-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4455474 30 -   4543643 G-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            153999 29 +    252755 A-T---------------GCA---------------tc--t-catt-tg----tgaata---tatgaa--aAC--
i Manis_javanica.JSZB01003966.1                         C 0 I 4
s Manis_pentadactyla.KN017078.1                             41596 29 +     58827 A-T---------------GCA---------------Tc--t-catt-tg----tgaata---tatgaa--AAC--
i Manis_pentadactyla.KN017078.1                         C 0 I 4
s Marmota_marmota.CZRN01000005.1                         36879253 30 +  64221397 A-T---------------GTG---------------TT--T-CACA-TA----AAAATA---CGTGAA--AAC-T
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       67505 29 -    234502 A-T---------------GTA---------------TC--T-CATT-TG----TGGATA---GATGAA--AAC--
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 I 4
s Mellivora_capensis.MelCap_flattened_line_15433             8383 44 -     87323 A-TGCAGAAGCATAGATAGCA---------------TC--T-CATT-TG----TGACTG---CATGAA--AAC--
i Mellivora_capensis.MelCap_flattened_line_15433        I 9 I 4
s Mesocricetus_auratus.KB708139.1                         1052824 48 -  26018355 A-A---------------CTT-ACAATAAGTTTcg-tt--t-tatttttacaataaatg---aatgaa--aac-t
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    4303 29 -     12939 A-T---------------GTA---------------CC--T-CATT-TG----TGAATA---CATGAA--AAC--
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 I 4
s Microcebus_murinus.CM007691.1                          16515471 30 +  47401472 C-T---------------GTA---------------TC--T-CATT-TG----TGAATG---CATGAA--AAC-T
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  44123 30 -     48017 A-T---------------GTG---------------TC--C-TCTT-TA----TGACCA---CATGAA--AAT-G
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22825797 47 -  98408828 A-A---------------ATTACAAAacgttt-tg-tt--t-tatt-ttacattacatA---AATGAA--AAC-T
i Microtus_ochrogaster.CM001673.1                       I 20 C 0
s Miopithecus_ogouensis.k141_2935907                         7221 30 +     29742 A-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        18730 40 -    104932 A-TGCAAAAGCATA----GCA---------------TC--T-CATT-TG----TGA---ATACATGAA--AAC--
i Mirounga_angustirostris.MirAng_flattened_line_8852    I 12 I 4
s Mirza_zaza.k141_593947                                     6166 30 -     12809 G-T---------------GTA---------------TC--T-CATT-TG----TGAATG---CATGAA--AAC-T
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 152078 29 +    154973 A-T---------------GTA---------------CC--T-CATT-CG----TGAATG---CATGAA--AAC--
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 I 4
s Moschus_moschiferus.MosMos_scaffold_78805                  8877 29 -     19904 A-T---------------GTT---------------CC--T-CATT-TG----TAAATA---CATGAA--AAC--
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 I 4
s Mungos_mungo.MunMun_flattened_line_8729                  152206 40 -    168139 A-TGTAAAAGCATA----GTA---------------TC--A-TACT-TG----TGAGTC---CATGAA--AAC--
i Mungos_mungo.MunMun_flattened_line_8729               I 12 I 4
s Mus_caroli.LT608236.1                                  70773061 46 +  92629107 A-A---------------TTTAtaatactttt--a-tt--t-catt-ttacaataCTTG---AGTGAA--AAC-T
i Mus_caroli.LT608236.1                                 I 31 C 0
s Mus_musculus.chr16                                     75495128 46 +  98207768 A-A---------------TTTATaatactttt--a-tt--t-catt-ttacaatacTTG---AGTGAA--AAC-T
i Mus_musculus.chr16                                    I 46 C 0
s Mus_pahari.LT608305.1                                  67561861 44 +  89017189 a-a---------------t-tataata-tttt--a-tt--t-catt-ttacaataCTTG---AGTGAA--AAC-T
i Mus_pahari.LT608305.1                                 I 31 C 0
s Mus_spretus.CM004110.1                                 74337836 46 +  97876770 A-A---------------TTTataatactttt--a-tt--t-catt-ttacaataCTTG---AGTGAA--AAC-T
i Mus_spretus.CM004110.1                                I 31 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             15884 28 +     98495 A-T---------------GTG---------------TT--T-CATT-TG----TAAAT-----GTGAA--CAC-T
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4430484 40 -  28371801 A-TGCAAAAGCATA----GCA---------------TC--T-CATT-TG----TGACTA---CATGAA--AAC--
i Mustela_putorius.JH417978.1                           I 9 I 4
s Myocastor_coypus.MyoCoy_scaffold_3653                     96625 31 -    117718 A-T---------------GCA---------------TGN-T-CCTT-TG----AGGATA---CTTGAA--CAC-T
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_12795                82 30 -     87886 A-T---------------GTG---------------AT--T-GCTT-TG----TGAATA---CATGAA--AAC-T
i Myrmecophaga_tridactyla.MyrTri_scaffold_12795         C 0 C 0
s Nannospalax_galili.KL201303.1                            125549 44 +    362372 aaa---------------aagaaaacaattttgtg-tt--t-catt-tg-----ggACA---CACAAA--AAC-T
i Nannospalax_galili.KL201303.1                         I 19 C 0
s Nasalis_larvatus.k141_153429                              11484 28 +     48152 ------------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4492121 40 -  14209539 A-TGCAAAAGCATA----GCA---------------TC--T-CATT-TG----TGA---ATACAAGAA--AAC--
i Neomonachus_schauinslandi.NINY01007774.1              I 12 I 4
s Neophocaena_asiaeorientalis.KZ688543.1                  3956669 29 -   4490290 a-t---------------gta---------------cC--T-CATT-CA----TGAATG---CATGAA--AAC--
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 I 4
s Nomascus_annamensis.k141_762468                            1287 30 -      2755 A-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Nomascus_annamensis.k141_762468                       C 0 C 0
s Nomascus_concolor.k141_256540                              7897 30 -      8966 A-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Nomascus_concolor.k141_256540                         C 0 C 0
s Nomascus_gabriellae.k141_1400361                           1838 30 -      2203 A-C---------------GTG---------------TC--T-CATT-TG----TGAATA---CAGGAA--AAC-T
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_453                             7150 30 +     12787 A-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Nomascus_siki_b.tarseq_453                        C 0 C 0
s Nomascus_siki_a.k141_421408                                  1752 30 +     16235 A-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                39862 40 +   3668941 a-tgCAAAAGCATA----GCA---------------TC--C-TAAT-TG----TGAATA---CATGAA--AAC--
i Nyctereutes_procyonoides.CAJHUB010000786.1            I 12 I 4
s Nycticebus_bengalensis.LG16                            65573044 30 -  95554990 A-T---------------GTG---------------TC--T-CATC-TG----TGAATA---CATGAA--AAC-T
i Nycticebus_bengalensis.LG16                           C 0 I 2
s Nycticebus_coucang.k141_6040852                             681 30 +      1868 A-T---------------GTG---------------TC--T-CATC-TG----TGAATA---CATGAA--AAC-T
i Nycticebus_coucang.k141_6040852                       C 0 I 2
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65681229 29 +  89412551 A-T---------------GTG---------------TC--T-CATC-TG----TGAATA---CATGAA--AAC--
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            5001086 30 -  23139505 A-T---------------GTG---------------TT--T-TATT-TG----CTAATA---CATAGA--AAC-T
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3691968 31 +  10294119 C-T---------------GCA---------------CAN-T-CCTT-TG----AGGATA---TCTAAA--CAC-T
i Octodon_degus.JH651621.1                              C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1085849 29 +   1425656 A-t---------------gtt---------------cc--t-catt-tg----taaata---cATGAA--AAC--
i Odocoileus_virginianus.KZ101650.1                     I 31 I 4
s Okapia_johnstoni.LVCL01S0017931.1                         43914 19 +     78940 A-T---------------GTT---------------CC--T-CATT-TG----TGAAT-----------------
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 I 6
s Ondatra_zibethicus.OndZib_scaffold_6821                  131608 42 +    145789 A-A---------------ATT-GCAAAAAGTTTTG-TT--T-TATT-TTA-----CATG---AATGAA--AAC-T
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  44537 47 +     62360 A-A---------------ATT-ATAGTAAATTTTG-TT--T-GATT-TTACAATACATG---CATGAA--AAC-T
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7230350 29 -   7562323 a-t---------------gta---------------cC--T-CATT-CG----TGAATG---CATGAA--AAC--
i Orcinus_orca.KB316965.1                               C 0 I 4
s Orycteropus_afer.OryAfe_flattened_line_13509              65187 30 -     66828 A-T---------------GAG---------------TC--T-CCTT-TG----TAACTA---CATGAA--AAC-T
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141885039 30 + 163896628 A-T---------------GTA---------------TC--T-CAGt-tg----taaata---cataaa--aac-t
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      316999 40 -    505867 a-tgCAAAAGCA-A-A--ACG---------------TC--T-TGAT-TG----TGAATA---CATGAA--AAC--
i Otocyon_megalotis.JAEUCK010005121.1                   I 12 I 4
s Otolemur_crassicaudatus.k141_505435                        6171 30 -     53940 A-T---------------GTA---------------TC--T-CATT-TG----TGAATG---CATGAA--TAC-T
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18014137 30 -  38779656 A-T---------------GTG---------------TC--T-CATT-TG----TGAATG---CATGAA--TAC-T
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134085109 29 - 275406953 A-T---------------GTT---------------CC--T-TATT-TG----TAAATA---CATGAA--AAC--
i Ovis_aries.CM001582.2                                 C 0 I 4
s Ovis_canadensis.OviCan_scaffold_6251                      86350 29 +    140051 A-T---------------GTT---------------CC--T-TATT-TG----TAAATA---CATGAA--AAC--
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 I 4
s Pan_paniscus.KQ411703.1                                   20101 30 +     41252 A-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Pan_paniscus.KQ411703.1                               I 127 I 65
s Pan_troglodytes.KZ622857.1                               334493 30 +    772158 A-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Pan_troglodytes.KZ622857.1                            I 390 I 5
s Panthera_onca.PanOnc_flattened_line_1615                  41761 40 +    295523 A-TGAAAAAGCATA----GCA---------------TA--T-TTCT-TG----TGAATC---CATGAA--AAC--
i Panthera_onca.PanOnc_flattened_line_1615              I 12 I 4
s Panthera_pardus.KV860323.1                              3645577 40 +  18214204 a-tgaaaaagCATA----GCA---------------TA--T-TTCT-TG----TGAATC---CATGAA--AAC--
i Panthera_pardus.KV860323.1                            I 12 I 4
s Panthera_tigris.KE721879.1                              5035214 40 -   6340057 a-tgaaaaagCATA----GCA---------------TA--T-TTCT-TG----TGAATC---CATGAA--AAC--
i Panthera_tigris.KE721879.1                            I 12 I 4
s Pantholops_hodgsonii.KE114631.1                         1073982 29 -   1292953 A-T---------------GTT---------------CC--T-TATT-TG----TAAATA---CATGAA--AAC--
i Pantholops_hodgsonii.KE114631.1                       C 0 I 4
s Papio_anubis.CM001492.2                               188161464 30 - 188283584 G-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              4554 30 +     25005 G-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47518836 30 +  47705337 G-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 72827 30 -    104429 G-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   11359 30 +     14967 G-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 7224 30 -      7628 G-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    123238 40 -    135482 A-TGTAAAAGCAT-G---GCA---------------TC--T-TACT-TG----TGAATC---CATGAA--AAC--
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 I 12 I 4
s Perodicticus_ibeanus.k141_117958                          11837 30 -     23713 A-T---------------GTG---------------TC--T-CATT-CA----CAAGTA---CATGAA--AAC-T
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           12988 30 +     61070 A-T---------------GTG---------------TC--T-CATT-CA----CAAGTA---CATGAA--AAC-T
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       3286 30 +     49596 A-A---------------ATG---------------TT--T-CAGT-TT----GGAAGG---CATGAA--AAC-T
i Perognathus_longimembris.PerPac_flattened_line_19359  I 16 C 0
s Peromyscus_maniculatus.KI615458.1                       2840350 47 -   3366660 a-a---------------attatagtaagttt-tg-tt--t-gatt-ttacaaTACATG---CATGAA--AAC-T
i Peromyscus_maniculatus.KI615458.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    17994 31 -     36578 A-T---------------GCA---------------TGN-T-CTTT-TG----CAAATT---CATGAA--AAC-T
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              4810 29 +      8220 A-T---------------GTA---------------CC--T-CATT-CG----TGAATG---CATGAA--AAC--
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 I 4
s Piliocolobus_badius.k141_1987485                           5022 30 -      5908 G-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       5641 30 -     17985 G-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            5008 30 +      7694 G-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26743491 30 +  26888534 G-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990          11292 29 +     21690 A-T---------------GTA---------------CC--T-CATT-CG----TGAATA---CATGAA--AAC--
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 I 4
s Plecturocebus_bernhardi.k141_959214                       27129 30 +     44506 A-T---------------GTA---------------TC--T-CATT-TG----TGAATA---CATGAA--AAA-T
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        27342 30 +     67491 A-T---------------GTA---------------TC--T-CATT-TG----TGAATA---CATGAA--AAA-T
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      17581 30 -     98129 A-T---------------GTA---------------TC--T-CATT-TG----TGAATA---CATGAA--AAA-C
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     27182 30 +    147771 A-T---------------GTA---------------TC--T-CATT-TG----TGAATA---CATGAA--AAA-T
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         3817 30 -     43940 A-T---------------GTA---------------TC--T-CATT-TG----TGAATA---CATGAA--AAA-T
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          7900 30 -     55515 A-T---------------GTA---------------TC--T-CATT-TG----TGAATA---CATGAA--AAA-T
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         27254 30 +    152463 A-C---------------GTA---------------TC--T-CATT-TG----TGAATA---CATGAA--AAA-T
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       5061 30 -    119457 A-T---------------GTA---------------TC--T-CATT-TG----TGAATA---CATGAA--AAA-T
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         16976 30 +    134592 A-T---------------GTA---------------TC--T-CATT-TG----TGAATA---CATGAA--AAA-T
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          27564 30 -     75465 A-C---------------GTA---------------TC--T-CATT-TG----TGAATA---CATGAA--AAA-T
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              192195 30 -    373494 A-T---------------GTG---------------TC--T-CATT-TG----TGAATC---CATGAA--AAC-T
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19812843 30 +  19899266 A-T---------------GTG---------------TC--T-CATT-TG----TGAATC---CATGAA--AAC-T
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               8766 28 -     15069 ------------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              8881 28 +     14865 ------------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                4993 30 -      9567 A-T---------------GTA---------------TC--T-CCTT-CC----TGACTA---CAAGAA--AAC-A
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6853791 30 +  12164890 a-t---------------gtg---------------tc--t-catT-TG----TGAATA---CATGAA--AAC-T
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     22599 30 -     30946 N-N---------------NNN---------------NN--N-NNNN-NN----NNNNNN---NNNNNN--NNN-N
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         8899 30 +     11805 A-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           48233 30 +     52369 A-T---------------GTG---------------CC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         40620 30 -     44753 A-T---------------GTG---------------CT--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            22543 30 +     27322 A-T---------------GTG---------------CC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       22188 30 -     53241 A-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         44451 30 -     48185 A-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        252130 40 -    344369 A-TGGAAAAGCATA----ACA---------------TC--C-CATT-TG----TGACTA---CATGAA--AAC--
i Pteronura_brasiliensis.PteBra_flattened_line_1343     I 9 I 4
s Pteropus_alecto.KB031157.1                             13248809 29 -  17261082 a-t---------------gta---------------tc--t-cATT-TG----TGGATA---CATGAA--AAC--
i Pteropus_alecto.KB031157.1                            C 0 I 4
s Pteropus_vampyrus.KN525959.1                             606759 29 -   3946241 a-t---------------gta---------------tc--t-caTT-TG----TGGATA---CATGAA--AAC--
i Pteropus_vampyrus.KN525959.1                          C 0 I 4
s Puma_concolor.QAVW01000427.1                          131541715 27 - 161321710 ------------------GCA---------------TA--T-TTCT-TG----TGAATC---CATGAA--AAC--
i Puma_concolor.QAVW01000427.1                          I 25 I 185
s Pygathrix_cinerea.k141_374971                             32872 28 +     56732 ------------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6809369 28 +   6970761 ------------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             8758 28 +     18040 ------------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                22697 29 +     68503 A-T---------------GTT---------------CC--T-CATT-TG----TAAATA---CATGAA--AAC--
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 I 4
s Rattus_norvegicus.chr11                                13918819 48 +  90463843 a-a---------------tttataaaaacatt-tcatt--t-catt-ttacaatACTTG---GGTGAA--AAC-T
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1794636 29 +   2252614 C-T---------------GTA---------------TC--T-CATT-TG----TGGGTA---CATGAA--AAC--
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 I 4
s Rhinopithecus_bieti.k119_554384                            3137 28 -     17045 ------------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206380624 28 - 206558726 ------------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44859527 28 -  45163003 ------------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                22154 29 +    109198 A-T---------------GTA---------------TC--T-CATT-TG----TGGATA---CATGAA--AAC--
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 I 4
s Saiga_tatarica.SaiTat_scaffold_371890                      3367 27 -      4338 ------------------GTT---------------CC--T-CGTT-TG----TAAATA---CATGAA--AAC--
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 I 4
s Saimiri_boliviensis.NW_024100938.1                     15677577 30 -  43202129 A-T---------------GTA---------------TC--T-CATT-TG----TGAATA---CATGAA--AAA-T
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        9491 30 +     34089 A-T---------------GTA---------------TC--T-CATT-TG----TGAATA---CATGAA--AAA-T
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              9430 30 -     60842 A-T---------------GTA---------------TC--T-CATT-TG----TGAATA---CATGAA--AAA-T
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              9524 30 +     67014 A-T---------------GTA---------------TC--T-CATT-TG----TGAATA---CATGAA--AAA-T
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              9501 30 +     60816 A-T---------------GTA---------------TC--T-CATT-TG----TGAATA---CATGAA--AAA-T
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 9438 30 -     76454 A-T---------------GTA---------------TC--T-CATT-TG----TGAATA---CATGAA--AAA-T
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17346208 30 -  30362882 A-T---------------GTA---------------TC--T-CATT-TG----TGAATC---CATGAA--AAA-T
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         25529 30 -     62485 A-T---------------GTA---------------TC--T-CATT-TG----TGAATC---CATGAA--AAA-T
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   41428 29 -    114521 A-T---------------CCC---------------TC--T-CACT-TG----TGAATA---CATGAA--AAC--
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 I 4
s Semnopithecus_entellus.k141_1572367                        6373 28 +     15331 ------------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      11748 28 +     20762 ------------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         121752 28 +    130994 ------------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           40532 28 +     46263 ------------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     33677 28 +     42640 ------------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        16699 28 +     30600 ------------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  106718 43 -    120886 A-A---------------AAT----GTAAGTTTTG-TT--C-TACT-TTATAATA-ATA---TATGAA--AAC-T
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            26086 29 +    739146 A-T---------------GTA---------------TA--T-CATT-TG----TGAATA---CATGAA--ATC--
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17776413 29 -  27805282 A-T---------------GCA---------------TT--A-TATT-TG----TGAATA---CATAAA--AAG--
i Sorex_araneus.JH798170.1                              C 0 I 4
s Spermophilus_dauricus.KZ294190.1                        2245088 30 +   2842873 A-T---------------gtg---------------tt--t-caca-ta----aaaata---tatgaa--aac-t
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             240910 37 -    276980 A-TGCAAAAGCATA----GCA---------------TC--T-CATT-TG----TGA------CATGAA--AAC--
i Spilogale_gracilis.SpiGra_flattened_line_905          I 12 I 4
s Suricata_suricatta.SurSur_flattened_line_20339            35107 40 +     62062 A-TGTAAAAGCATA----GTA---------------TC--A-TACT-TG----TGAGCC---CATGAA--AAC--
i Suricata_suricatta.SurSur_flattened_line_20339        I 12 I 4
s Sus_scrofa.CM000824.4                                 189277114 29 + 218635234 A-T---------------GTA---------------TT--T-CATT-TG----TGAATA---CATGAA--AAC--
i Sus_scrofa.CM000824.4                                 C 0 I 4
s Symphalangus_syndactylus.tarseq_24                        19875 30 -  13920577 A-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               18351 30 +     45698 A-T---------------GTG---------------AT--T-GCTT-TG----TGAATA---CATGAA--AAC-T
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      812707 29 +   1148477 A-T---------------GTA---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC--
i Tapirus_indicus.TapInd_scaffold_176                   C 0 I 4
s Tapirus_terrestris.TapTer_scaffold_14939                  63349 29 +     99546 A-T---------------GTA---------------TC--T-CATT-TG----CGAATA---CATGAA--AAC--
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 I 4
s Theropithecus_gelada.CM009951.1                       194012997 30 - 194193292 G-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                  1534 30 -      3104 A-T---------------GTT---------------AC--T-CCTT-TG----TGAATA---CATGAA--AAC-T
i Tolypeutes_matacus.TolMat_scaffold_475685             C 0 C 0
s Trachypithecus_auratus.k141_738098                        30020 28 +     38948 ------------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   23580 28 -     32910 ------------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      5481 28 -     12939 ------------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       4909 28 -     14244 ------------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           46302 28 -     54611 ------------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        4103 28 -     11566 ------------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     6287 28 -     15592 ------------------GTG---------------TC--T-CATT-TG----TGAATA---CAGGAA--AAC-T
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          4939 28 +     14371 ------------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   3225 28 +     12481 ------------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        3206 28 -     24393 ------------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       8350 28 -     28054 ------------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44663134 28 -  44834318 ------------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       5446 28 +     13828 ------------------GTG---------------TT--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                  10865 29 +     90398 A-T---------------GTA---------------TC--T-CATT-TG----TGAATA---CATTAA--AAC--
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 I 4
s Trichechus_manatus.JH594618.1                          16090884 30 +  31416278 A-T---------------GTG---------------TC--T-CCTT-TG----TGACTA---CACGAA--AAC-T
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2798820 28 -   3938065 a-t---------------gtg---------------TC--T-CATT-TG----TGAAT-----ATGAA--AAC-A
i Tupaia_chinensis.KB320831.1                           T 3315 I 3315
s Tupaia_tana.TupTan_flattened_line_68454                   10963 28 +     13056 A-T---------------GTG---------------TC--T-CATT-TG----TGAAT-----ATGAA--AAC-A
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69319080 29 -  96451834 a-t---------------gta---------------cC--T-CATT-CG----TGAATG---CATGAA--AAC--
i Tursiops_truncatus.MRVK01000923.1                     C 0 I 4
s Uropsilus_gracilis.UroGra_scaffold_4115                    1820 29 +    136657 A-T---------------GTA---------------TC--T-CACT-TG----TGAATA---CATGAA--AAC--
i Uropsilus_gracilis.UroGra_scaffold_4115               I 35 I 4
s Ursus_maritimus.KK498671.1                              6522558 40 +  28682327 a-tGCAAAAGCATA----GCA---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC--
i Ursus_maritimus.KK498671.1                            I 12 I 4
s Varecia_rubra.k141_432109                                 10464 30 -     20643 A-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             29999 30 -     33872 A-T---------------GTG---------------TC--T-CATT-TG----TGAATA---CATGAA--AAC-T
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1530109 29 -   2331223 C-T---------------GTA---------------TC--T-CATT-TG----TGAACA---CATGAA--AAC--
i Vicugna_pacos.KN269600.1                              C 0 I 4
s Vulpes_lagopus.VulLag_flattened_line_2045                146226 40 -    281493 A-TGCAAAAGCATA----GCG---------------TC--T-TAAT-TG----TGAATA---CATGAA--AAC--
i Vulpes_lagopus.VulLag_flattened_line_2045             I 12 I 4
s Xerus_inauris.XerIna_scaffold_7898                       132584 30 -    134049 A-T---------------GTA---------------TT--T-CACT-TG----AAAATA---CGTGAA--AAC-T
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_202118                     2199 30 -      3360 A-T---------------GTG---------------TC--T-CATG-TG----GGAATG---TGTGGA--AAG-G
i Zapus_hudsonius.ZapHud_scaffold_202118                C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            3669 29 -     13665 A-T---------------GTA---------------CC--T-CATT-CG----TGAATA---CATGAA--AAC--
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 I 4
e Eptesicus_fuscus.JH977687.1                             4710851  0 +   6522550 C
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Zalophus_californianus.ZalCal_flattened_line_4097        221654  0 -    227762 C
e Tonatia_saurophila.TonSau_scaffold_3334                  140002  0 -    259118 C
e Tadarida_brasiliensis.TadBra_scaffold_61492                4259  0 +     20549 C
e Pteronotus_parnellii.KE867983.1                            7995  0 -     27784 C
e Pipistrellus_pipistrellus.PipPip_scaffold_3306           101415  0 +    112873 C
e Odobenus_rosmarus.KB229369.1                             686793  0 -   3126709 C
e Noctilio_leporinus.NocLep_scaffold_12062                  52626 31 +     94413 I
e Myotis_myotis.MyoMyo_scaffold_6123                        15918  0 +     66751 C
e Myotis_lucifugus.GL429887.1                             3470691  0 -   3747815 C
e Myotis_davidii.KB114863.1                               5024262  0 +   6462685 C
e Myotis_brandtii.KE161952.1                               973184  0 +   8389877 C
e Murina_feae.MurFea_scaffold_2254                          26170  0 -    100666 C
e Mormoops_blainvillei.MorMeg_scaffold_2952                165343  0 +    265003 C
e Miniopterus_schreibersii.MinSch_scaffold_24116            39640  0 +     45743 C
e Miniopterus_natalensis.LDJU01000022.1                   8215181  0 +  10048721 C
e Micronycteris_hirsuta.MicHir_scaffold_37978               26828  0 -     32043 C
e Lasiurus_borealis.LasBor_scaffold_59542                    7402  0 +     26176 C
e Desmodus_rotundus.KZ672188.1                           18703091  0 -  18957592 C
e Carollia_perspicillata.CarPer_scaffold_4436               63873  0 +     67245 C
e Artibeus_jamaicensis.ArtJam_scaffold_41619                12877  0 -     29036 C
e Anoura_caudifer.AnoCau_scaffold_422                      394587  0 -    631301 C
e Hylobates_pileatus_a.tarseq_592                             37267 2881 -     60944 I
e Tarsius_wallacei.k141_48636                               64696  0 +     65473 C
e Tarsius_lariang.k141_609102                               31387  0 +     42269 C
e Psammomys_obesus.NESX01026517.1                           40218  0 +     77221 C
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Meriones_unguiculatus.MerUng_scaffold_9483                 3241  0 +    115071 C
e Cephalopachus_bancanus.k141_702587                        12545  0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530  0 +    345090 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               18618 5 +    209709 AGTTG
s Acinonyx_jubatus.LLWD01000356.1                         2041391 2 +   3721120 ---TA
i Acinonyx_jubatus.LLWD01000356.1                       I 4 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    119107 4 -    189883 -GCTG
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10665335 2 +  23371972 ---TG
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 4 C 0
s Ailurus_fulgens.LNAC01000003.1                          7102283 2 -  16596857 ---TG
i Ailurus_fulgens.LNAC01000003.1                        I 4 C 0
s Allactaga_bullata.AllBul_scaffold_141108                   2459 5 -      7259 AGCTA
i Allactaga_bullata.AllBul_scaffold_141108              C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   6504 5 -     60446 AGTTG
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         7218 5 -     29318 AGTTG
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         6156 5 +     38766 AGTTG
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          7114 5 -     80423 AGTTG
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              2062 5 +     19852 AGTTG
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                4282 5 -     12443 AGTTG
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                             1605 5 +      5070 AGTTG
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                 1352 5 -      1641 AGTTG
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          4091 5 -     24210 AGTTG
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_494922                              595 5 -      8325 AGTTG
i Alouatta_nigerrima.k141_494922                        C 0 C 0
s Alouatta_palliata.k141_405616                              6509 5 +     16794 AGTTG
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_347198                              538 5 +      9111 AGTTG
i Alouatta_puruensis.k141_347198                        C 0 C 0
s Alouatta_seniculus.k141_790278                             5786 5 -      9835 AGTTG
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3528536 2 +   4113121 ---TA
i Ammotragus_lervia.NIVO01013474.1                      I 4 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             5699 2 +     55446 ---TA
i Antilocapra_americana.AntAmePen_scaffold_27338        I 4 C 0
s Aotus_azarae.k141_3170768                                 67395 5 +     78111 AGTTG
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                           10339 5 +     22701 AGTTG
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5754306 5 +   9889416 AGTTG
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                            10883 5 -    104377 AGTTG
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                              10912 5 +     23246 AGTTG
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     3548 5 +     11424 AGCCA
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        7485 5 +      9265 AGTTA
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9544196 5 +  39197703 AGTTG
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             65470 5 +     85812 AGTTG
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                16480 5 +     89302 AGTTG
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             20984 5 -     58268 AGTTG
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             68978 5 +    119057 AGTTG
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              10947 5 -     25888 AGTTG
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                12021 5 -     16375 AGCTC
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               5637 5 +      6337 AGCTC
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26385926 2 +  51448160 ---TA
i Balaenoptera_acutorostrata.KI537095.1                 I 4 C 0
s Balaenoptera_bonaerensis.DF502048.1                       11099 2 -     13118 ---TA
i Balaenoptera_bonaerensis.DF502048.1                   I 4 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   50493 2 -     72089 ---TG
i Beatragus_hunteri.BeaHun_scaffold_21644               I 4 C 0
s Bison_bison.KN264915.1                                   305456 2 -   6870073 ---TA
i Bison_bison.KN264915.1                                I 4 C 0
s Bos_indicus.CM003021.1                                 22959562 2 + 161108492 ---TA
i Bos_indicus.CM003021.1                                I 4 C 0
s Bos_mutus.JH883513.1                                     421741 2 +    998990 ---TA
i Bos_mutus.JH883513.1                                  I 4 C 0
s Bos_taurus.CM000177.6                                  22668214 2 + 158972876 ---TA
i Bos_taurus.CM000177.6                                 I 4 C 0
s Bubalus_bubalis.KI419065.1                               677052 2 +   1914593 ---TA
i Bubalus_bubalis.KI419065.1                            I 4 C 0
s Cacajao_ayresi.k141_724503                               118816 5 -    171031 AGTTG
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 17836 5 +    125063 AGTTG
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                19883 5 -    216513 AGTTG
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       12426 5 -    134917 AGTTG
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3225034 2 -   8989139 ---TA
i Camelus_bactrianus.KN276303.1                         I 4 C 0
s Camelus_dromedarius.KN271192.1                           402734 2 -  15254737 ---TA
i Camelus_dromedarius.KN271192.1                        I 4 C 0
s Camelus_ferus.KB016973.1                                2978472 2 +   6889770 ---TA
i Camelus_ferus.KB016973.1                              I 4 C 0
s CanFam4.chr31                                          11528186 2 +  39901454 ---TG
i CanFam4.chr31                                         I 4 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   23160 2 +     87036 ---TG
i Canis_lupus_VD.CanFam_VD_scaffold_16982               I 4 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11275083 2 -  35597290 ---TG
i Canis_lupus_dingo.QKWQ01001993.1                      I 4 C 0
s Canis_lupus_familiaris.chr31                           11097580 2 +  39895921 ---TG
i Canis_lupus_familiaris.chr31                          I 4 C 0
s Canis_lupus_orion.HG994411.1                           16464365 2 -  44759192 ---TG
i Canis_lupus_orion.HG994411.1                          I 4 C 0
s Capra_aegagrus.CM003214.1                              21335969 2 + 157394656 ---TA
i Capra_aegagrus.CM003214.1                             I 4 C 0
s Capra_hircus.CM004562.1                               135714322 2 - 157403528 ---TA
i Capra_hircus.CM004562.1                               I 4 C 0
s Capromys_pilorides.CapPil_scaffold_780116                   553 5 +      1571 AGCTA
i Capromys_pilorides.CapPil_scaffold_780116             C 0 C 0
s Castor_canadensis.CasCan_scaffold_1326                     1031 4 -    202837 AG-TG
i Castor_canadensis.CasCan_scaffold_1326                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   164773 2 -    276539 ---CA
i Catagonus_wagneri.CatWag_scaffold_1305                I 4 C 0
s Cavia_aperea.AVPZ01000278.1                            15790710 5 -  24422027 AGCTA
i Cavia_aperea.AVPZ01000278.1                           C 0 I 20
s Cavia_porcellus.DS562889.1                             15802655 5 -  24440124 AGCTA
i Cavia_porcellus.DS562889.1                            C 0 I 20
s Cavia_tschudii.CavTsc_scaffold_488                       180827 5 +    436027 AGCTA
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 I 20
s Cebus_albifrons.Contig22                               18896550 5 -  29618158 AGTTG
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                13200 5 -     26817 AGTTG
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                17444 5 +     25043 AGTTG
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4370007 2 +   7569818 ---TG
i Ceratotherium_simum.JH767818.1                        I 4 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_171732          164 2 +      8380 ---TG
i Ceratotherium_simum_cottoni.CerCot_scaffold_171732    I 4 C 0
s Cercocebus_atys.KQ010443.1                              6560444 5 +   6739814 AGTTG
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      31921 5 +     60454 AGTTG
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          7125 5 -     21101 AGTTG
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         64435 5 -    107033 AGTTG
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        7295 5 -     17608 AGTTG
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          4463 5 +     45019 AGTTG
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           4739 5 +     15177 AGTTG
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          7345 5 +     16677 AGTTG
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           29541 5 +     35983 AGTTG
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11996066 5 +  12117833 AGTTG
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46483048 5 +  46592721 AGTTG
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                       1159 5 -     27215 AGTTG
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       7359 5 +     35577 AGTTG
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        7153 5 -     25661 AGTTG
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        7325 5 -     17744 AGTTG
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        26694 5 +     37128 AGTTG
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           5719 5 -      6963 AGCTG
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           64237 5 -     68416 AGCTA
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_854352                             539 5 +     27737 AGCTA
i Cheirogaleus_medius.k141_854352                       C 0 C 0
s Cheracebus_lucifer.k141_619653                            10507 5 -     18223 AGTTG
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              2248 5 +    188999 AGTTG
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           46547 5 +     57117 AGTTG
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          51227 5 +     54541 AGTTG
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15965400 3 +  43084221 AAC--
i Chinchilla_lanigera.JH721867.1                        C 0 I 17
s Chiropotes_israelita.k141_1189915                         76028 5 +    196370 AGTTG
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          20209 5 +     40510 AGTTG
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15144879 5 -  15256731 AGTTG
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      39343 5 -     53260 AGTTG
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101149902 5 + 101219884 AGTTG
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                19742 5 -     21363 AGCTG
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           765046 5 +    964067 AGCTG
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_304221               322 5 -      7053 AGATG
i Chrysochloris_asiatica.ChrAsi_scaffold_304221         C 0 C 0
s Colobus_angolensis.KN985967.1                          10889674 5 +  10971483 ATCTG
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147667602 5 + 156195979 ATCTG
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            19585 5 +     23629 ATCTG
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60624033 2 +  78930452 ---TG
i Condylura_cristata.JH655880.1                         I 4 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         4421 2 -      5782 ---TG
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    I 4 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 284012 4 -    399297 -GCTG
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53036322 4 +  72327488 -GCTA
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              3910 2 -     22648 ---TG
i Crocidura_indochinensis.CroInd_scaffold_27484         I 4 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            59403 2 -     70449 ---TG
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 4 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  216146 5 -    956709 AGCTG
i Ctenodactylus_gundi.CteGun_scaffold_447               I 7 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 36921 5 -     67205 AGCTA
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 I 19
s Cuniculus_paca.CunPac_flattened_line_16637                21905 5 +     26546 AGCTA
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 I 19
s Dasyprocta_punctata.DasPun_flattened_line_634             63052 5 -    236241 AGCTA
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 I 19
s Dasypus_novemcinctus.JH568778.1                          186763 5 -   6883506 AGCTG
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16850183 5 +  31942871 AGCTA
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80042518 2 -  96802777 ---TA
i Delphinapterus_leucas.KZ290064.1                      I 4 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 328406 2 +    993696 ---TG
i Dicerorhinus_sumatrensis.PEKH010003161.1              I 4 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   9040 2 +    151128 ---TG
i Diceros_bicornis.DicBicMic_scaffold_9545              I 4 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   160871 5 +    228994 AGCTA
i Dinomys_branickii.DinBra_scaffold_1996                C 0 I 19
s Dipodomys_ordii.KN672545.1                              3661320 5 +   4240102 ATCTG
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  3694 5 -     11986 AGCTG
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                41614 5 -     73477 AGGCA
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 I 19
s Echinops_telfairi.JH980316.1                           23002531 5 -  44670279 AACTT
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 15131 2 +     24177 ---TG
i Eidolon_helvum.KE772537.1                             I 4 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1498451 2 +   1727528 ---TA
i Elaphurus_davidianus.JRFZ01086400.1                   I 4 C 0
s Elephantulus_edwardii.JH947210.1                        7835283 5 +  15467074 AGGta
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        245008 4 -    369425 -gcTG
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01076532.1                           1360 4 +      9159 -GCTG
i Ellobius_talpinus.LOJH01076532.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85879330 2 +  99434291 ---CG
i Enhydra_lutris.KZ291749.1                             I 4 C 0
s Equus_asinus.JREZ01000062.1                             5858269 2 -   7175178 ---TG
i Equus_asinus.JREZ01000062.1                           I 4 C 0
s Equus_caballus.CM000402.2                              13356755 2 +  41866177 ---TG
i Equus_caballus.CM000402.2                             I 4 C 0
s Equus_przewalskii.ATBW01073585.1                          18245 2 +     92910 ---TG
i Equus_przewalskii.ATBW01073585.1                      I 4 C 0
s Erinaceus_europaeus.JH835290.1                         11543420 2 +  16010500 ---TA
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48781912 5 -  48907691 AGTTG
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          320769 2 +    330699 ---TA
i Eschrichtius_robustus.EscRob_flattened_line_685       I 4 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             67225 2 +     89355 ---TA
i Eubalaena_japonica.EubJap_flattened_line_7756         I 4 C 0
s Eulemur_albifrons.k141_715837                             10301 5 +     13586 AGCTA
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_1015201                              3560 5 -      4292 AGCTA
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            16697 5 +     36558 AGCTA
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            13019 5 +     60246 AGCTA
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                16504 5 +    109717 AGCTA
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 4487 5 -     19505 AGCTA
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                21162 5 +     27497 AGCTA
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           23618 5 +     26808 AGCTA
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                38350 5 +     46535 AGCTA
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              21091 5 -     29447 AGCTA
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129901040 2 - 159252932 ---TA
i Felis_catus.CM001386.2                                I 4 C 0
s Felis_catus_fca126.CM031420.1                         129288017 2 - 158578461 ---TA
i Felis_catus_fca126.CM031420.1                         I 4 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 29207 2 +     52776 ---TA
i Felis_nigripes.FelNig_flattened_line_8080             I 4 C 0
s Fukomys_damarensis.KN123630.1                          13897345 5 -  19261668 AGCTA
i Fukomys_damarensis.KN123630.1                         C 0 I 19
s Galago_moholi.ctg555                                     216340 5 -    847004 AGCTA
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           18702 5 -     43889 AGCTA
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          15843 5 +     27357 AGCTA
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               160625 5 +    324696 ACCTG
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    188219 2 -    189561 ---TA
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 6 C 0
s Glis_glis.GliGli_scaffold_79770                           17515 5 -     18683 AGCTT
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                              10315 5 -     14630 AGTTG
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119657415 5 - 195582420 AGTTG
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   80833 5 +    118900 AGTCT
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         7091 5 +     10286 AGCTA
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             5572 5 -     11661 AGCTA
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                            10896 5 +     56096 AGCTA
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        34145 5 -     42470 AGCTA
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        50771 5 -     54384 AGCTA
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              24521 2 +     53719 ---TG
i Helogale_parvula.HelPar_flattened_line_22962          I 4 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                35360 2 -     91191 ---TA
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 4 C 0
s Heterocephalus_glaber.JH602058.1                        2561672 5 +  31725842 AGCTA
i Heterocephalus_glaber.JH602058.1                      C 0 I 19
s Heterohyrax_brucei.HetBruBak_scaffold_25354               63919 5 +     73687 ATCTG
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 I 184
s Hippopotamus_amphibius.HipAmp_scaffold_1308              152574 2 +    277961 ---TA
i Hippopotamus_amphibius.HipAmp_scaffold_1308           I 4 C 0
s Hipposideros_armiger.JXIK01001085.1                      285617 2 -    477199 ---GA
i Hipposideros_armiger.JXIK01001085.1                   I 4 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959               3302 2 +     26078 ---GA
i Hipposideros_galeritus.HipGal_scaffold_52959          I 4 C 0
s Hoolock_leuconedys.ctg79                                     10240 5 -   7690867 AGTTG
i Hoolock_leuconedys.ctg79                                 C 0 I 36
s Hyaena_hyaena.HyaHya_flattened_line_20729                 24957 2 -     67322 ---TG
i Hyaena_hyaena.HyaHya_flattened_line_20729             I 4 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           22258 5 -    119109 AGCTA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 I 19
s Hylobates_abbotti.k141_1816750                             2811 5 +      3202 AGTTG
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1136966                               820 5 +      9785 AGTTG
i Hylobates_agilis.k141_1136966                         C 0 C 0
s Hylobates_klossii.k141_468230                              4300 5 +      5464 AGTTG
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14629646 5 -  25970782 AGTTG
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            2198 5 +      4161 AGTTG
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                    10583 5 +     22540 AGCTA
i Hystrix_cristata.HysCri_scaffold_50788                C 0 I 19
s Ictidomys_tridecemlineatus.JH393315.1                   7131417 5 +  13083262 aGCCA
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   2633 5 +      3484 AGCTC
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              14748 2 +     17520 ---TA
i Inia_geoffrensis.IniGeo_flattened_line_66725          I 4 C 0
s Jaculus_jaculus.JH725517.1                              8580207 5 +  11848649 AGCTG
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               29365 2 +     37189 ---TA
i Kogia_breviceps.KogBre_flattened_line_35920           I 4 C 0
s Lagothrix_lagothricha.k141_12968                          55068 5 -    147782 AGTTG
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lemur_catta.scaffold_1                                258412449 5 - 285822530 AGCTA
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        29777 5 +     39228 AGCTA
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            59141 5 +     63517 AGCTA
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        37523 5 -     38897 AGCTA
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      3567 5 -     13103 AGCTA
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3093278 2 -   3498232 ---TG
i Leptonychotes_weddellii.KB714749.1                    I 4 C 0
s Lepus_americanus.LepAme_scaffold_62849                    22053 5 +     22452 AGCTG
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            141675 2 +   3060487 ---TA
i Lipotes_vexillifer.KE558548.1                         I 4 C 0
s Lophocebus_aterrimus.ctg55                             19253533 5 +  19376315 AGTTG
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           16306 3 +     84689 --CTA
i Loris_lydekkerianus.k141_550999                       I 2 C 0
s Loris_tardigradus.ctg97                                 3784039 3 +   6799190 --TTA
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20599840 5 -  62548349 AGCTG
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11097036 2 +  39895028 ---TG
i Lycaon_pictus.CM007556.1                              I 4 C 0
s Macaca_arctoides.k141_2201161                             25282 5 +     74745 AGTTG
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12711745 5 +  12821369 AGTTG
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                4318 5 -     26467 AGTTG
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           52189 5 +     63263 AGTTG
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 4299 5 -     26361 AGTTG
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_2667654                                 602 5 -      5626 AGTTG
i Macaca_leonina.k141_2667654                           C 0 C 0
s Macaca_maura.k141_251854                                  50718 5 -     79256 AGTTG
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196040816 5 + 196197964 AGTTG
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11450986 5 +  11645122 AGTTG
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   9672 5 -     46448 AGTTG
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                7333 5 -     13212 AGTTG
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 21015 5 -     55006 AGTTG
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43846437 5 +  43892939 AGTTG
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               22299 5 -     24607 AGTTG
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               9669 5 -     27140 AGTTG
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43442705 5 -  43563597 AGTTG
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4455504 5 -   4543643 AGTTG
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            154032 2 +    252755 ---TG
i Manis_javanica.JSZB01003966.1                         I 4 C 0
s Manis_pentadactyla.KN017078.1                             41629 2 +     58827 ---TG
i Manis_pentadactyla.KN017078.1                         I 4 C 0
s Marmota_marmota.CZRN01000005.1                         36879283 5 +  64221397 AGGCA
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       67538 2 -    234502 ---TA
i Megaderma_lyra.MegLyr_scaffold_3562                   I 4 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             8431 2 -     87323 ---TG
i Mellivora_capensis.MelCap_flattened_line_15433        I 4 C 0
s Mesocricetus_auratus.KB708139.1                         1052872 4 -  26018355 -gcTA
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    4336 2 -     12939 ---TA
i Mesoplodon_bidens.MesBid_scaffold_96348               I 4 C 0
s Microcebus_murinus.CM007691.1                          16515501 5 +  47401472 AGCTA
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  44153 5 -     48017 AACTT
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22825844 4 -  98408828 -ACTG
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         7251 5 +     29742 AGTTG
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        18774 2 -    104932 ---TG
i Mirounga_angustirostris.MirAng_flattened_line_8852    I 4 C 0
s Mirza_zaza.k141_593947                                     6196 5 -     12809 AGCTA
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 152111 2 +    154973 ---TA
i Monodon_monoceros.MonMon_M_scaffold_5598              I 4 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  8910 2 -     19904 ---TA
i Moschus_moschiferus.MosMos_scaffold_78805             I 4 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  152250 2 -    168139 ---TG
i Mungos_mungo.MunMun_flattened_line_8729               I 4 C 0
s Mus_caroli.LT608236.1                                  70773107 4 +  92629107 -GCTG
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75495174 4 +  98207768 -GCTG
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67561905 4 +  89017189 -GCTG
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74337882 4 +  97876770 -GCTG
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             15912 5 +     98495 GGCTT
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4430528 2 -  28371801 ---TG
i Mustela_putorius.JH417978.1                           I 4 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     96656 5 -    117718 AGCTA
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_12795               112 5 -     87886 AGCTG
i Myrmecophaga_tridactyla.MyrTri_scaffold_12795         C 0 C 0
s Nannospalax_galili.KL201303.1                            125593 5 +    362372 AGCTG
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                              11512 5 +     48152 ATCTG
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4492165 2 -  14209539 ---TG
i Neomonachus_schauinslandi.NINY01007774.1              I 4 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3956702 2 -   4490290 ---TA
i Neophocaena_asiaeorientalis.KZ688543.1                I 4 C 0
s Nomascus_annamensis.k141_762468                            1317 5 -      2755 AGTTG
i Nomascus_annamensis.k141_762468                       C 0 C 0
s Nomascus_concolor.k141_256540                              7927 5 -      8966 AGTTG
i Nomascus_concolor.k141_256540                         C 0 C 0
s Nomascus_gabriellae.k141_1400361                           1868 5 -      2203 AGTTG
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_453                             7180 5 +     12787 AGTTG
i Nomascus_siki_b.tarseq_453                        C 0 C 0
s Nomascus_siki_a.k141_421408                                  1782 5 +     16235 AGTTG
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                39906 2 +   3668941 ---TG
i Nyctereutes_procyonoides.CAJHUB010000786.1            I 4 C 0
s Nycticebus_bengalensis.LG16                            65573076 3 -  95554990 --CTA
i Nycticebus_bengalensis.LG16                           I 2 C 0
s Nycticebus_coucang.k141_6040852                             713 3 +      1868 --CTA
i Nycticebus_coucang.k141_6040852                       I 2 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65681258 2 +  89412551 ---TA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            5001116 5 -  23139505 AGTTA
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3691999 5 +  10294119 AGCTA
i Octodon_degus.JH651621.1                              C 0 I 19
s Odocoileus_virginianus.KZ101650.1                       1085882 2 +   1425656 ---TA
i Odocoileus_virginianus.KZ101650.1                     I 4 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         43939 2 +     78940 ---TA
i Okapia_johnstoni.LVCL01S0017931.1                     I 6 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  131650 4 +    145789 -GCTG
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  44584 4 +     62360 -GTGG
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7230383 2 -   7562323 ---TA
i Orcinus_orca.KB316965.1                               I 4 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              65217 5 -     66828 AGCTA
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141885069 5 + 163896628 agCTG
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      317043 2 -    505867 ---TG
i Otocyon_megalotis.JAEUCK010005121.1                   I 4 C 0
s Otolemur_crassicaudatus.k141_505435                        6201 5 -     53940 AGCTA
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18014167 5 -  38779656 AGCTA
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134085142 2 - 275406953 ---TA
i Ovis_aries.CM001582.2                                 I 4 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      86383 2 +    140051 ---TA
i Ovis_canadensis.OviCan_scaffold_6251                  I 4 C 0
s Pan_paniscus.CM003386.1                               127579594 5 - 205426864 AGTTG
i Pan_paniscus.CM003386.1                               I 108 I 36
s Pan_troglodytes.CM009241.2                            120156754 5 - 196562556 AGTTG
i Pan_troglodytes.CM009241.2                            I 108 I 36
s Panthera_onca.PanOnc_flattened_line_1615                  41805 2 +    295523 ---TA
i Panthera_onca.PanOnc_flattened_line_1615              I 4 C 0
s Panthera_pardus.KV860323.1                              3645621 2 +  18214204 ---TA
i Panthera_pardus.KV860323.1                            I 4 C 0
s Panthera_tigris.KE721879.1                              5035258 2 -   6340057 ---TA
i Panthera_tigris.KE721879.1                            I 4 C 0
s Pantholops_hodgsonii.KE114631.1                         1074015 2 -   1292953 ---TA
i Pantholops_hodgsonii.KE114631.1                       I 4 C 0
s Papio_anubis.CM001492.2                               188161494 5 - 188283584 AGTTG
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              4584 5 +     25005 AGTTG
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47518866 5 +  47705337 AGTTG
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 72857 5 -    104429 AGTTG
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   11389 5 +     14967 AGTTG
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 7254 5 -      7628 AGTTG
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    123282 2 -    135482 ---TG
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 I 4 C 0
s Perodicticus_ibeanus.k141_117958                          11867 5 -     23713 AGCTA
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           13018 5 +     61070 AGCTA
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       3316 5 +     49596 AGGTG
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615458.1                       2840397 4 -   3366660 -GTGG
i Peromyscus_maniculatus.KI615458.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    18025 5 -     36578 AGCGA
i Petromus_typicus.PetTyp_scaffold_33007                C 0 I 19
s Phocoena_phocoena.PhoPho_flattened_line_53071              4843 2 +      8220 ---TA
i Phocoena_phocoena.PhoPho_flattened_line_53071         I 4 C 0
s Piliocolobus_badius.k141_1987485                           5052 5 -      5908 ATCTG
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       5671 5 -     17985 ATCTG
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            5038 5 +      7694 ATCTG
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26743521 5 +  26888534 ATCTG
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990          11325 2 +     21690 ---TA
i Platanista_gangetica.PlaMin_flattened_line_72990      I 4 C 0
s Plecturocebus_bernhardi.k141_959214                       27159 5 +     44506 AGTTG
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        27372 5 +     67491 AGTTG
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      17611 5 -     98129 AGTTG
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     27212 5 +    147771 AGTTG
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         3847 5 -     43940 AGTTG
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          7930 5 -     55515 AGTTG
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         27284 5 +    152463 AGTTG
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       5091 5 -    119457 AGTTG
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         17006 5 +    134592 AGTTG
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          27594 5 -     75465 AGTTG
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              192225 5 -    373494 AGTTG
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19812873 5 +  19899266 AGTTG
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               8794 5 -     15069 ATCTG
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              8909 5 +     14865 ATCTG
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                5023 5 -      9567 ATCTG
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 I 184
s Prolemur_simus.MPIZ01000048.1                           6853821 5 +  12164890 AGCTA
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     22629 5 -     30946 NNNNN
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         8929 5 +     11805 AGCTC
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           48263 5 +     52369 AGCTC
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         40650 5 -     44753 AGCTC
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            22573 5 +     27322 AGCTC
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       22218 5 -     53241 AGCTC
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         44481 5 -     48185 AGCTC
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        252174 2 -    344369 ---CG
i Pteronura_brasiliensis.PteBra_flattened_line_1343     I 4 C 0
s Pteropus_alecto.KB031157.1                             13248842 2 -  17261082 ---TG
i Pteropus_alecto.KB031157.1                            I 4 C 0
s Pteropus_vampyrus.KN525959.1                             606792 2 -   3946241 ---TG
i Pteropus_vampyrus.KN525959.1                          I 4 C 0
s Puma_concolor.QAVW01000427.1                          131541927 2 - 161321710 ---ta
i Puma_concolor.QAVW01000427.1                          I 185 C 0
s Pygathrix_cinerea.k141_374971                             32900 5 +     56732 ATCTG
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6809397 5 +   6970761 ATCTG
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             8786 5 +     18040 ATCTG
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                22730 2 +     68503 ---TA
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 4 C 0
s Rattus_norvegicus.chr11                                13918867 4 +  90463843 -GCTG
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1794669 2 +   2252614 ---AA
i Rhinolophus_sinicus.LVEH01000179.1                    I 4 C 0
s Rhinopithecus_bieti.k119_554384                            3165 5 -     17045 ATCTG
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206380652 5 - 206558726 ATCTG
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44859555 5 -  45163003 ATCTG
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                22187 2 +    109198 ---TG
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            I 4 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                      3398 2 -      4338 ---TA
i Saiga_tatarica.SaiTat_scaffold_371890                 I 4 C 0
s Saimiri_boliviensis.NW_024100938.1                     15677607 5 -  43202129 AGTTG
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        9521 5 +     34089 AGTTG
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              9460 5 -     60842 AGTTG
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              9554 5 +     67014 AGTTG
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              9531 5 +     60816 AGTTG
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 9468 5 -     76454 AGTTG
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17346238 5 -  30362882 AGTTG
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         25559 5 -     62485 AGTTG
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   41461 2 -    114521 ---TA
i Scalopus_aquaticus.ScaAqu_scaffold_9300               I 4 C 0
s Semnopithecus_entellus.k141_1572367                        6401 5 +     15331 ATCTG
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      11776 5 +     20762 ATCTG
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         121780 5 +    130994 ATCTG
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           40560 5 +     46263 ATCTG
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     33705 5 +     42640 ATCTG
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        16727 5 +     30600 ATCTG
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  106761 4 -    120886 -GATG
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            26115 2 +    739146 ---TG
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17776446 2 -  27805282 ---TG
i Sorex_araneus.JH798170.1                              I 4 C 0
s Spermophilus_dauricus.KZ294190.1                        2245118 5 +   2842873 agCCA
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             240951 2 -    276980 ---TG
i Spilogale_gracilis.SpiGra_flattened_line_905          I 4 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            35151 2 +     62062 ---TG
i Suricata_suricatta.SurSur_flattened_line_20339        I 4 C 0
s Sus_scrofa.CM000824.4                                 189277147 2 + 218635234 ---TA
i Sus_scrofa.CM000824.4                                 I 4 C 0
s Symphalangus_syndactylus.tarseq_24                        19905 5 -  13920577 AGTTG
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               18381 5 +     45698 AGCTG
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      812740 2 +   1148477 ---TG
i Tapirus_indicus.TapInd_scaffold_176                   I 4 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  63382 2 +     99546 ---TG
i Tapirus_terrestris.TapTer_scaffold_14939              I 4 C 0
s Theropithecus_gelada.CM009951.1                       194013027 5 - 194193292 AGTTG
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                  1564 5 -      3104 AGCTG
i Tolypeutes_matacus.TolMat_scaffold_475685             C 0 C 0
s Trachypithecus_auratus.k141_738098                        30048 5 +     38948 ATCTG
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   23608 5 -     32910 ATCTG
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      5509 5 -     12939 ATCTG
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       4937 5 -     14244 ATCTG
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           46330 5 -     54611 ATCTG
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        4131 5 -     11566 ATCTG
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     6315 5 -     15592 ATCTG
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          4967 5 +     14371 ATCTG
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   3253 5 +     12481 ATCTG
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        3234 5 -     24393 ATCTG
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       8378 5 -     28054 ATCTG
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44663162 5 -  44834318 ATCTG
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       5474 5 +     13828 ATCTG
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                  10898 2 +     90398 ---TA
i Tragulus_javanicus.TraJav_scaffold_14717              I 4 C 0
s Trichechus_manatus.JH594618.1                          16090914 5 +  31416278 AGCTG
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2802163 5 -   3938065 AGCTG
i Tupaia_chinensis.KB320831.1                           I 3315 C 0
s Tupaia_tana.TupTan_flattened_line_68454                   10991 5 +     13056 AGCTG
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69319113 2 -  96451834 ---TA
i Tursiops_truncatus.MRVK01000923.1                     I 4 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                    1853 2 +    136657 ---TA
i Uropsilus_gracilis.UroGra_scaffold_4115               I 4 C 0
s Ursus_maritimus.KK498671.1                              6522602 2 +  28682327 ---TG
i Ursus_maritimus.KK498671.1                            I 4 C 0
s Varecia_rubra.k141_432109                                 10494 5 -     20643 AGCTA
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             30029 5 -     33872 AGCTA
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1530142 2 -   2331223 ---TA
i Vicugna_pacos.KN269600.1                              I 4 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                146270 2 -    281493 ---TG
i Vulpes_lagopus.VulLag_flattened_line_2045             I 4 C 0
s Xerus_inauris.XerIna_scaffold_7898                       132614 5 -    134049 ACTCA
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_202118                     2229 5 -      3360 AGCCG
i Zapus_hudsonius.ZapHud_scaffold_202118                C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            3702 2 -     13665 ---TA
i Ziphius_cavirostris.ZipCav_flattened_line_60625       I 4 C 0
e Eptesicus_fuscus.JH977687.1                             4710851 0 +   6522550 C
e Macroglossus_sobrinus.MacSob_scaffold_879                703757 0 +    802869 C
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Zalophus_californianus.ZalCal_flattened_line_4097        221654 0 -    227762 C
e Tonatia_saurophila.TonSau_scaffold_3334                  140002 0 -    259118 C
e Tadarida_brasiliensis.TadBra_scaffold_61492                4259 0 +     20549 C
e Pteronotus_parnellii.KE867983.1                            7995 0 -     27784 C
e Pipistrellus_pipistrellus.PipPip_scaffold_3306           101415 0 +    112873 C
e Odobenus_rosmarus.KB229369.1                             686793 0 -   3126709 C
e Noctilio_leporinus.NocLep_scaffold_12062                  52626 31 +     94413 I
e Myotis_myotis.MyoMyo_scaffold_6123                        15918 0 +     66751 C
e Myotis_lucifugus.GL429887.1                             3470691 0 -   3747815 C
e Myotis_davidii.KB114863.1                               5024262 0 +   6462685 C
e Myotis_brandtii.KE161952.1                               973184 0 +   8389877 C
e Murina_feae.MurFea_scaffold_2254                          26170 0 -    100666 C
e Mormoops_blainvillei.MorMeg_scaffold_2952                165343 0 +    265003 C
e Miniopterus_schreibersii.MinSch_scaffold_24116            39640 0 +     45743 C
e Miniopterus_natalensis.LDJU01000022.1                   8215181 0 +  10048721 C
e Micronycteris_hirsuta.MicHir_scaffold_37978               26828 0 -     32043 C
e Lasiurus_borealis.LasBor_scaffold_59542                    7402 0 +     26176 C
e Desmodus_rotundus.KZ672188.1                           18703091 0 -  18957592 C
e Carollia_perspicillata.CarPer_scaffold_4436               63873 0 +     67245 C
e Artibeus_jamaicensis.ArtJam_scaffold_41619                12877 0 -     29036 C
e Anoura_caudifer.AnoCau_scaffold_422                      394587 0 -    631301 C
e Hylobates_pileatus_a.tarseq_592                             37267 2881 -     60944 I
e Tarsius_wallacei.k141_48636                               64696 0 +     65473 C
e Tarsius_lariang.k141_609102                               31387 0 +     42269 C
e Psammomys_obesus.NESX01026517.1                           40218 0 +     77221 C
e Pithecia_vanzolinii.k141_831006                           15424 0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514 0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521 0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292 0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093 0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038 0 +     78826 C
e Pithecia_albicans.k141_991845                             45662 0 -     61926 C
e Meriones_unguiculatus.MerUng_scaffold_9483                 3241 0 +    115071 C
e Cephalopachus_bancanus.k141_702587                        12545 0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530 0 +    345090 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               18623 36 +    209709 TA------------AAATAAG-G-AA-A----AT--------------------GTAAT-TTTG--------AAA---C--A-TCTTC-A-A
s Acinonyx_jubatus.LLWD01000356.1                         2041393 36 +   3721120 TA------------TAACAA--G-GGAA----AT--------------------GGAAT-TTTG--------AGC---T--A-TCTTA-A-A
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    119111 36 -    189883 TG------------TAACAAG-G-GA-C----AT--------------------GTAGT-ATGA--------AGA---C--A-TCTAC-A-A
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10665337 35 +  23371972 TA------------TAACAA--G-AGAA----AT--------------------GTGAT-TT-G--------AGG---C--A-TCTTA-A-A
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7102285 36 -  16596857 CA------------TAACAA--G-GGAA----AT--------------------GCGAT-TTTG--------AGA---C--A-TCTTA-A-A
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_141108                   2464 36 -      7259 AA------------TAAGAAG-G-GA-A----AT--------------------GCAAT-TTAG--------ACA---C--A-TCATC-A-T
i Allactaga_bullata.AllBul_scaffold_141108              C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   6509 36 -     60446 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCTTC-A-A
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         7223 36 -     29318 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCTTC-A-A
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         6161 36 +     38766 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCTTC-A-A
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          7119 36 -     80423 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCTTC-A-A
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              2067 36 +     19852 TA------------TAATAAG-G-TA-A----AT--------------------GTAAT-GTTG--------AAA---C--A-TCTTA-A-A
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                4287 36 -     12443 TA------------TAATAAG-G-TA-A----AT--------------------GTAAT-TTTG--------AAA---C--A-TCTTA-A-A
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                             1610 36 +      5070 TA------------TAATAAG-G-TA-A----AT--------------------GTAAT-GTTG--------AAA---C--A-TCTTA-A-A
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                 1357 36 -      1641 AA------------TAATAAG-G-TA-A----AG--------------------GTAAT-TTTG--------AAA---C--A-TCTTA-A-A
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          4096 36 -     24210 TA------------TAATAAG-G-TA-A----AT--------------------GTAAT-TTTG--------AAA---C--A-TCTTA-A-A
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_494922                              600 36 -      8325 AA------------TAATAAG-G-TA-A----AG--------------------GTAAT-TTTG--------AAA---C--A-TCTTA-A-A
i Alouatta_nigerrima.k141_494922                        C 0 C 0
s Alouatta_palliata.k141_405616                              6514 36 +     16794 TA------------TAATAAG-G-TA-A----AT--------------------GTAAT-TTTG--------AAA---C--A-TCTTA-A-A
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_347198                              543 36 +      9111 TA------------TAATAAG-G-TA-A----AT--------------------GTAAT-TTTG--------AAA---C--A-TCTTA-A-A
i Alouatta_puruensis.k141_347198                        C 0 C 0
s Alouatta_seniculus.k141_790278                             5791 36 -      9835 AA------------TGATAAG-G-TA-A----AG--------------------GTAAT-TTTG--------AAA---C--A-TCTTA-A-A
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3528538 37 +   4113121 TG------------TAATAA--G-GAAA----AT--------------------GTAATTTTAG--------AGA---C--A-TCTTC-A-G
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             5701 37 +     55446 TA------------TAACAA--G-GAAA----AT--------------------GTAATTTTAG--------AGA---C--A-TTTTC-A-G
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 67400 37 +     78111 TA------------TAATAAG-G-TA-A----AT--------------------GTAAT-TTTG--------AAA---C--A-TCTTAAA-A
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                           10344 37 +     22701 TA------------TAATAAG-G-TA-A----AT--------------------GTAAT-TTCG--------AAA---C--A-TCTTAAA-A
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5754311 37 +   9889416 TA------------TAATAAG-G-TA-A----AT--------------------GTAAT-TTCg--------aaa---c--a-tcttaaa-a
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                            10888 37 -    104377 TA------------TAATAAG-G-TA-A----AT--------------------GTAAT-TTTG--------AAA---C--A-TCTTAAA-A
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                              10917 37 +     23246 TA------------TAATAAG-G-TA-A----AT--------------------GTAAT-TTTG--------AAA---C--A-TCTTAAA-A
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     3553 26 +     11424 TA------------TAACAGG-G-GA-A----AT--------------------GTAAT-TTAG--------AA------------------
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 I 8
s Arctocebus_calabarensis.k141_587554                        7490 36 +      9265 TG------------TAACAAG-A-GA-A----AA--------------------GTACT-TTAG--------AGA---C--A-TCTTC-A-T
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9544201 36 +  39197703 TA------------TAATAAG-G-TA-A----AT--------------------GTAAT-TTTG--------AAA---C--A-TCTTA-A-A
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             65475 36 +     85812 TA------------TAATAAG-G-TA-A----AT--------------------GTAAT-TTTG--------AAA---C--A-TCTTA-A-A
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                16485 36 +     89302 TA------------TAATAAG-G-TA-A----AT--------------------GTAAT-TTTG--------AAA---C--A-TCTTA-A-A
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             20989 36 -     58268 TA------------TAATAAG-G-TA-A----AT--------------------GTAAT-TTTG--------AAA---C--A-TCTTA-A-A
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             68983 36 +    119057 TA------------TAATAAG-G-TA-A----AT--------------------GTAAT-TTTG--------AAA---C--A-TCTTA-A-A
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              10952 36 -     25888 TA------------TAATAAG-G-TA-A----AT--------------------GTAAT-TTTG--------AAA---C--A-TCTTA-A-A
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                12026 36 -     16375 TA------------TAACCAG-G-GA-A----AT--------------------GTAAT-TTAG--------AAA---C--A-TCTCC-A-A
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               5642 36 +      6337 TA------------TAACCAG-G-GA-A----AT--------------------GTAAT-TTAG--------AAA---C--A-TCTCC-A-A
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26385928 36 +  51448160 TG------------TAACAA--G-GGAA----AT--------------------GTAAT-TTAG--------AGA---C--A-TCTTC-A-A
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                       11101 36 -     13118 TG------------TAACAA--G-GGAA----AT--------------------GTAAT-TTAG--------AGA---T--A-TCTTC-A-A
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   50495 37 -     72089 TG------------TAATAA--G-GAAA----AT--------------------GTAATGTTAG--------AGA---C--A-TCTTC-A-G
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   305458 37 -   6870073 TG------------TAATAA--G-GAAA----AT--------------------GTAATTTTAG--------AGA---C--A-TCTTC-A-G
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22959564 37 + 161108492 TG------------TAATAA--G-GAAA----AT--------------------GTAATTTTAG--------AGA---C--A-TCTTC-A-G
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     421743 37 +    998990 TG------------TAATAA--G-GAAA----AT--------------------GTAATTTTAG--------AGA---C--A-TCTTC-A-G
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22668216 37 + 158972876 TG------------TAATAA--G-GAAA----AT--------------------GTAATTTTAG--------AGA---C--A-TCTTC-A-G
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               677054 37 +   1914593 TG------------TAATAA--G-GAAA----AT--------------------GTAATTTTAG--------AGA---C--A-TCTTC-A-G
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               118821 36 -    171031 TA------------TAATAAG-G-TA-A----AC--------------------GTAAT-TTCG--------AAA---C--A-TCTTA-A-A
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 17841 36 +    125063 TA------------TAATAAG-G-TA-A----AC--------------------GTAAT-TTCG--------AAA---C--A-TCTTA-A-A
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                19888 36 -    216513 TA------------TAATAAG-G-TA-A----AC--------------------GTAAT-TTCG--------AAA---C--A-TCTTA-A-A
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       12431 36 -    134917 TA------------TAATAAG-G-TA-A----AC--------------------GTAAT-TTCG--------AAA---C--A-TCTTA-A-A
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3225036 36 -   8989139 TA------------TAACAA--G-GGAA----AT--------------------GTAAT-TTAG--------AGA---C--A-TCTTC-A-A
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           402736 36 -  15254737 TA------------TAACAA--G-GGAA----AT--------------------GTAAT-TTAG--------AGA---C--A-TCTTC-A-A
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2978474 36 +   6889770 TA------------TAACAA--G-GGAA----AT--------------------GTAAT-TTAG--------AGA---C--A-TCTTC-A-A
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11528188 36 +  39901454 TA------------TAACAA--G-GGAA----AT--------------------GTGAT-TTGG--------AGA---C--A-TCATA-A-A
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   23162 36 +     87036 TA------------TAACAA--G-GGAA----AT--------------------GTGAT-TTGG--------AGA---C--A-TCATA-A-A
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11275085 36 -  35597290 TA------------TAACAA--G-GGAA----AT--------------------GTGAT-TTGG--------AGA---C--A-TCATA-A-A
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11097582 36 +  39895921 TA------------TAACAA--G-GGAA----AT--------------------GTGAT-TTGG--------AGA---C--A-TCATA-A-A
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16464367 36 -  44759192 TA------------TAACAA--G-GGAA----AT--------------------GTGAT-TTGG--------AGA---C--A-TCATA-A-A
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21335971 37 + 157394656 TG------------TAATAA--G-GAAA----AT--------------------GTAATTTTAG--------AGA---C--A-TCTTC-A-G
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135714324 37 - 157403528 TG------------TAATAA--G-GAAA----AT--------------------GTAATTTTAG--------AGA---C--A-TCTTC-A-G
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_780116                   558 14 +      1571 TATCACTAGCTA--TA----------------------------------------------------------------------------
i Capromys_pilorides.CapPil_scaffold_780116             C 0 I 51
s Castor_canadensis.CasCan_scaffold_1326                     1035 36 -    202837 TA------------TAATGAG-G-AA-A----AT--------------------GTAAT-TTAG--------AGA---C--A-TCTGA-G-A
i Castor_canadensis.CasCan_scaffold_1326                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   164775 36 -    276539 TA------------TAACCA--G-GGAA----AT--------------------GTAAT-TTAG--------AGA---C--A-TCTTC-A-A
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15790735 17 -  24422027 ------------------------------------------------------G------TAG--------AGA---T--A-AGAGC-AAA
i Cavia_aperea.AVPZ01000278.1                           I 20 C 0
s Cavia_porcellus.DS562889.1                             15802680 17 -  24440124 ------------------------------------------------------G------TAG--------AGA---T--A-AGAGC-AAA
i Cavia_porcellus.DS562889.1                            I 20 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       180852 17 +    436027 ------------------------------------------------------G------TAG--------AGA---T--A-AGAGC-AAA
i Cavia_tschudii.CavTsc_scaffold_488                    I 20 C 0
s Cebus_albifrons.Contig22                               18896555 37 -  29618158 TA------------TAATAAG-G-TA-A----AT--------------------GTAAT-TTTG--------AAA---C--A-TCTTAAA-A
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                13205 37 -     26817 TA------------TAATAAG-G-TA-A----AT--------------------GTAAT-TTTG--------AAA---C--A-TCTTAAA-A
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                17449 37 +     25043 TA------------TAATAAG-G-TA-A----AT--------------------GTAAT-TTTG--------AAA---C--A-TCTTAAA-A
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4370009 36 +   7569818 TA------------AAACAA--G-GGGA----AT--------------------GTAAT-TTAG--------AGA---C--A-TCTTC-A-A
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_171732          166 36 +      8380 TA------------AAACAA--G-GGGA----AT--------------------GTAAT-TTAG--------AGA---C--A-TCTTC-A-A
i Ceratotherium_simum_cottoni.CerCot_scaffold_171732    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6560449 36 +   6739814 TA------------CAATAag-g-aa-a----at--------------------gtaat-ttca--------aaA---C--A-TCTTC-A-A
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      31926 36 +     60454 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCTTC-A-A
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          7130 36 -     21101 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCTTC-A-A
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         64440 36 -    107033 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCTTC-A-A
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        7300 36 -     17608 TA------------CGATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCTTC-A-A
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          4468 36 +     45019 TA------------CGATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCTTC-A-A
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           4744 36 +     15177 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCTTC-A-A
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          7350 36 +     16677 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCTTC-A-A
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           29546 36 +     35983 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCTTC-A-A
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11996071 36 +  12117833 TA------------TGATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCTTC-A-A
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46483053 36 +  46592721 TA------------CGATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCTTC-A-A
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                       1164 36 -     27215 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCTTC-A-A
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       7364 36 +     35577 TA------------TGATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCTTC-A-A
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        7158 36 -     25661 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCTTC-A-A
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        7330 36 -     17744 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCTTC-A-A
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        26699 36 +     37128 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCTTC-A-A
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           5724 38 -      6963 TG------------TAACAAG-G-GA-A----AT--------------------GTAAT-TTAG--------GGA---CAAA-TCTTC-A-A
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           64242 36 -     68416 TA------------TAAAAAG-G-AA-A----AT--------------------ATAAT-TTAG--------AAA---C--A-TCTCC-A-A
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_854352                             544 36 +     27737 TA------------TAAAAAG-G-AA-A----AT--------------------GTAAT-TTAG--------AAA---C--A-TCTCC-A-A
i Cheirogaleus_medius.k141_854352                       C 0 C 0
s Cheracebus_lucifer.k141_619653                            10512 36 -     18223 AA------------TAATAAG-G-TA-A----AC--------------------GTAAT-TTCA--------AAA---C--A-TCTTA-A-A
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              2253 36 +    188999 AA------------TAATAAG-G-TA-A----AC--------------------GTAAT-TTCA--------AAA---C--A-TCTTA-A-A
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           46552 36 +     57117 AA------------TAATAAG-G-TA-A----AC--------------------GTAAT-TTCA--------AAA---C--A-TCTTA-A-A
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          51232 36 +     54541 AA------------TAATAAG-G-TA-A----AC--------------------GTAAT-TTCA--------AAA---C--A-TCTTA-A-A
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15965420 16 +  43084221 ------------------------------------------------------G------TAG--------AGA---T--A-TCACT-A-A
i Chinchilla_lanigera.JH721867.1                        I 17 C 0
s Chiropotes_israelita.k141_1189915                         76033 36 +    196370 TA------------TAATAAG-G-TA-A----AC--------------------GTAAT-TTTG--------GAA---C--A-TCTTA-A-A
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          20214 36 +     40510 TA------------TAATAAG-G-TA-A----AC--------------------GTAAT-TTCG--------GAA---C--A-TCTTA-A-A
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15144884 36 -  15256731 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCTTC-A-A
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      39348 36 -     53260 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCTTC-A-A
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101149907 36 + 101219884 TA------------Caataag-g-aa-a----at--------------------gtaat-ttca--------aaA---C--A-TCTTC-A-A
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                19747 38 -     21363 TA------------TAATAAG-G-GA-A----CT--------------------GTAAT-TTAG--------AGA---CAAA-TCTTC-A-A
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           765051 38 +    964067 TA------------TAATAAG-G-GA-A----CT--------------------GTAAT-TTAG--------AGA---CAAA-TCTTC-A-A
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_304221               327 38 -      7053 TA------------TTAAAAA-A-AA-G----AT--------------------GGGAT-TTAG--------ACA---TAGA-TTTTC-A-A
i Chrysochloris_asiatica.ChrAsi_scaffold_304221         C 0 C 0
s Colobus_angolensis.KN985967.1                          10889679 36 +  10971483 TA------------CAATaag-g-aa-a----at--------------------gtaat-ttca--------aAA---C--A-TCCTC-A-A
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147667607 36 + 156195979 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCCTC-A-A
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            19590 36 +     23629 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCCTC-A-A
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60624035 30 +  78930452 TA------------TAACAA--G-GA-A----AT--------------------GT------AG--------TGG---T--A-TCTTC-A-A
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         4423 36 -      5782 TA------------TAATGA--G-GAAA----CT--------------------GCAAT-TCAG--------AGA---T--A-TCTTC-A-A
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 284016 36 -    399297 TG------------TAACAAA-G-GA-T----AT--------------------ATCCT-ATGA--------AGA---C--A-TCTAT-G-A
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53036326 36 +  72327488 TG------------TACCAAG-A-GA-C----AT--------------------GTTGT-ACAA--------AAA---C--A-TCTAC-A-A
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              3912 34 -     22648 CA------------TAGCAA--G-GA-A----AT--------------------GTAAA-TAAG--------A-T---C--A-TCTTT-G-A
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            59405 36 -     70449 TA------------TAACAA--G-GGAA----AT--------------------GGAAT-TTTG--------AGA---C--A-TCTTA-A-A
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  216151 35 -    956709 TA------------TAGCAGA-G-AA-A----TA--A-T--A-A----------G------TTG--------AGG---C--C-CCAAC-A-A
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 36945 16 -     67205 ------------------------------------------------------G------TAG--------CAA---T--A-GCAAC-A-A
i Ctenomys_sociabilis.CteSoc_scaffold_19489             I 19 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                21929 17 +     26546 ------------------------------------------------------G------TAG--------AGA---T--A-TCAGC-GAA
i Cuniculus_paca.CunPac_flattened_line_16637            I 19 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             63076  7 -    236241 ------------------------------------------------------G------TAG--------AGA-----------------
i Dasyprocta_punctata.DasPun_flattened_line_634         I 19 I 7
s Dasypus_novemcinctus.JH568778.1                          186768 38 -   6883506 TA------------TAACAAG-G-GA-A----GT--------------------GTAAC-TTAG--------AGA---CAAA-TCTTC-A-A
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16850188 36 +  31942871 TA------------TAATAAG-G-GA-A----AT--------------------GTAAT-TTAG--------AGA---C--A-TCTCC-A-A
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80042520 36 -  96802777 TA------------TAACAA--G-GGAA----AT--------------------GTAAT-TTAG--------AGA---C--G-TCTTC-A-A
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 328408 36 +    993696 TA------------AAACAA--G-GGAA----AT--------------------GTAAT-TTAG--------AGA---C--A-TCTTC-A-A
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   9042 36 +    151128 TA------------AAACAA--G-GGAA----AT--------------------GTAAT-TTAG--------AGA---C--A-TCTTC-A-A
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   160895 16 +    228994 ------------------------------------------------------G------TAG--------AGA---T--A-CCAGC-A-A
i Dinomys_branickii.DinBra_scaffold_1996                I 19 C 0
s Dipodomys_ordii.KN672545.1                              3661325 35 +   4240102 TA------------TAATGAG-G-AA-A----AT--------------------GTAAT--TTG--------ATA---C--A-TCTGA-G-A
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  3699 35 -     11986 TA------------TAATGAG-G-AA-A----AT--------------------GTAAT--TTG--------ATA---C--A-TCTGA-G-A
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                41638 17 -     73477 ------------------------------------------------------A------TAA--------AGA---T--C-ACAAC-AAA
i Dolichotis_patagonum.DolPat_scaffold_14102            I 19 C 0
s Echinops_telfairi.JH980316.1                           23002536 34 -  44670279 TA------------TAAAA-T-A-TC-A----AT--------------------GGAAT-CAA----------G----CAGA-TCTGT-A-A
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 15133 36 +     24177 TA------------TAATAA--G-GGAA----AT--------------------GTAAT-TTAG--------AGA---C--A-TCTTA-A-A
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1498453 37 +   1727528 TG------------TAATAA--G-GAAA----AT--------------------GTAATTTTAG--------AGA---C--A-TCTTC-A-G
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7835288 37 +  15467074 ta------------taaaatg-t-a--a----at--------------------agaaT-TGAA--------AGG---CATA-TTATA-A-A
i Elephantulus_edwardii.JH947210.1                      C 0 I 201
s Ellobius_lutescens.LOEQ01003611.1                        245012 36 -    369425 TG------------TAAAAAG-G-AA-C----AT--------------------GTAAT-ATAA--------AGA---C--A-TCTAC-A-A
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01076532.1                           1364 36 +      9159 TG------------TTAAAAG-G-AA-C----AT--------------------GTAAT-ATAA--------AGA---C--A-TCTAC-A-A
i Ellobius_talpinus.LOJH01076532.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85879332 36 +  99434291 TA------------TAACAA--G-GGAA----AT--------------------GTGAT-TTTG--------AAA---C--A-TCTTA-A-G
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Equus_asinus.JREZ01000062.1                             5858271 36 -   7175178 TA------------AAACAA--G-GGAA----AT--------------------GTAAT-TTAG--------AGA---C--A-TCTTC-A-A
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13356757 36 +  41866177 TA------------AAACAA--G-GGAA----AT--------------------GTAAT-TTAG--------AGA---C--A-TCTTC-A-A
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          18247 36 +     92910 TA------------AAACAA--G-GGAA----AT--------------------GTAAT-TTAG--------AGA---C--A-TCTTC-A-A
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11543422 33 +  16010500 TG------------TAGCAG--A-GA-A----AT--------------------GTCAT-TTGA--------AGA---T--A-TCTTA----
i Erinaceus_europaeus.JH835290.1                        C 0 I 1
s Erythrocebus_patas.Contig8                             48781917 36 -  48907691 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCTTC-A-A
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          320771 36 +    330699 TG------------TAACAA--G-GGAA----AT--------------------GTAAT-TTAG--------AGA---C--A-TCTTC-A-A
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             67227 36 +     89355 TA------------TAACAA--G-GGAA----AT--------------------GTAAT-TTAG--------AGA---C--A-TCTTC-A-A
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                             10306 36 +     13586 TA------------TAACAAG-A-GA-A----AT--------------------GTAAT-TTAG--------AAA---C--A-TCTCC-A-A
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_1015201                              3565 36 -      4292 TA------------TAACAAG-A-GA-A----AT--------------------GTAAT-TTAG--------AAA---C--A-TCTCC-A-A
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            16702 36 +     36558 TA------------TAACAAG-A-GA-A----AT--------------------GTAAT-TTAG--------AAA---C--A-TCTCC-A-A
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            13024 36 +     60246 TA------------TAAGAAG-A-GA-A----AT--------------------GTAAT-TTAG--------AAA---C--A-CCTCC-A-A
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                16509 36 +    109717 TA------------TAACAAG-A-GA-A----AT--------------------GTAAT-TTAG--------AAA---C--A-TCTCC-A-A
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 4492 36 -     19505 TA------------TAAGAAG-A-GA-A----AT--------------------GTAAT-TTAG--------AAA---C--A-TCTCC-A-A
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                21167 36 +     27497 TA------------TAACAAG-A-GA-A----AT--------------------GTAAT-TTAG--------AAA---C--A-TCTCC-A-A
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           23623 36 +     26808 TA------------TAACAAG-A-GA-A----AT--------------------GTAAT-TTAG--------AAA---C--A-TCTCC-A-A
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                38355 36 +     46535 TA------------TAACAAG-A-GA-A----AT--------------------GTAAT-TTAG--------AAA---C--A-TCTCC-A-A
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              21096 36 -     29447 TA------------TAACAAG-A-GA-A----AT--------------------GTAAT-TTAG--------AAA---C--A-TCTCC-A-A
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129901042 36 - 159252932 TA------------TAACAA--G-GGAA----AT--------------------GGAAT-TTTG--------AGC---T--A-TCTTA-A-A
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129288019 36 - 158578461 TA------------TAACAA--G-GGAA----AT--------------------GGAAT-TTTG--------AGC---T--A-TCTTA-A-A
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 29209 36 +     52776 TA------------TAACAA--G-GAAA----AT--------------------GGAAT-TTTG--------AGC---T--A-TTTTA-A-A
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13897369 13 -  19261668 ------------------------------------------------------G------TAG--------TGC---T--A-TC----A-A
i Fukomys_damarensis.KN123630.1                         I 19 C 0
s Galago_moholi.ctg555                                     216345 36 -    847004 TA------------TAACGAG-A-GA-A----AA--------------------GTACT-TTAG--------AGA---T--A-TCTTC-A-A
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           18707 36 -     43889 TA------------TAACGAG-A-GA-A----AA--------------------GTACT-TTAG--------AGA---T--A-TCTTC-A-A
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          15848 36 +     27357 TG------------TAACAAG-A-GA-A----AA--------------------GTACT-TTAG--------AAA---C--A-TCTTC-A-A
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               160630 36 +    324696 TA------------TAACAAA-G-GA-A----AT--------------------ATAAC-TTAG--------AGA---C--A-TTTTC-A-A
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    188221 37 -    189561 TG------------TAACAA--G-GAAA----AT--------------------GTAATTTTAG--------AGA---C--A-TCTTC-A-G
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           17520 56 -     18683 TA------------TAACAAA-G-GA-A----ATGTAATTTAGAGATTTACAATGTAAT-TTAG--------AAA---C--A-TCTGT-A-T
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                              10320 36 -     14630 TA------------CGATAAG-G-AA-A----AT--------------------TTAAT-TTTG--------AAA---C--A-TCTTC-A-A
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119657420 36 - 195582420 TA------------CGATaag-g-aa-a----at--------------------ttaat-tttg--------aaa---c--a-tcTTC-A-A
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   80838 56 +    118900 TA------------TAACAAA-T-GG-A----ATGTAATTTATTGGTTTACAATGTAAT-TTAA--------AGA---A--A-TCTGT-A-T
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         7096 36 +     10286 GA------------TAACAAG-A-GA-A----AT--------------------GTAAT-TTAG--------AAA---C--A-TCTCC-A-A
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             5577 36 -     11661 GA------------TAACAAG-A-GA-A----AT--------------------GTAAT-TTAG--------AAA---C--A-TCTCC-A-A
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                            10901 36 +     56096 GA------------TAACAAG-A-GA-A----AT--------------------GTAAT-TTAG--------AAA---C--A-TCTCC-T-A
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        34150 36 -     42470 GA------------TAACAAG-A-GA-A----AT--------------------GTAAT-TTAG--------AAA---C--A-TCTCC-A-A
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        50776 36 -     54384 GA------------TAACAAG-A-GA-A----AT--------------------GTAAT-TTAG--------AAA---C--A-TCTCC-A-A
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              24523 36 +     53719 TA------------TAATAA--G-GGAA----AT--------------------GGAAT-TTTG--------AGA---C--A-TCTTA-A-A
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                35362 37 -     91191 TG------------TAATAA--G-GAAA----AT--------------------GTAATTTTAG--------AGA---C--A-TCTTC-A-G
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2561696 16 +  31725842 ------------------------------------------------------A------TAG--------AGC---T--A-TCAGC-A-A
i Heterocephalus_glaber.JH602058.1                      I 19 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               64108 28 +     73687 TA------------TAAAAAG-G-GG-A----GC--------------------AGAGT-TTAG--------AGA---C-------------
i Heterohyrax_brucei.HetBruBak_scaffold_25354           I 184 I 8
s Hippopotamus_amphibius.HipAmp_scaffold_1308              152576 31 +    277961 TT------------TAACAA--G-GGAA----AT--------------------GT------AG--------AGA---T--G-TCTTC-A-A
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      285619 36 -    477199 TA------------TAACAA--G-GGAA----CT--------------------GTCAT-TTAG--------AGA---T--A-TCTTC-A-A
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959               3304 36 +     26078 TA------------TAACAA--G-GGAA----CT--------------------GTCAT-TTAG--------AGT---C--A-TCTTC-A-A
i Hipposideros_galeritus.HipGal_scaffold_52959          C 0 C 0
s Hoolock_leuconedys.ctg315                                   351336 36 +    431944 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTTG--------AAA---C--A-TCTTC-A-A
i Hoolock_leuconedys.ctg315                                I 113 I 128
s Hyaena_hyaena.HyaHya_flattened_line_20729                 24959 36 -     67322 TA------------TAGCAA--G-GGAA----AT--------------------GGAAT-TTTG--------AGA---C--A-TCTTA-A-A
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           22282 17 -    119109 ------------------------------------------------------G------CAG--------AGA---T--A-ACAGC-AAA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       I 19 C 0
s Hylobates_abbotti.k141_1816750                             2816 36 +      3202 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTTG--------AAA---C--A-TCTTC-A-A
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1136966                               825 36 +      9785 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTTG--------AAA---C--A-TCTTC-A-A
i Hylobates_agilis.k141_1136966                         C 0 C 0
s Hylobates_klossii.k141_468230                              4305 36 +      5464 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTTG--------AAA---C--A-TCTTC-A-A
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14629651 36 -  25970782 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTTG--------AAA---C--A-TCTTC-A-A
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            2203 36 +      4161 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTTG--------AAA---C--A-TCTTC-A-A
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                    10607 16 +     22540 ------------------------------------------------------G------CAG--------AGA---T--A-TCAGC-A-A
i Hystrix_cristata.HysCri_scaffold_50788                I 19 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7131422 36 +  13083262 GA------------CAGCAAG-G-GA-A----AT--------------------GTAAT-TTAG--------AGC---T--A-Tctgg-a-a
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   2638 36 +      3484 TG------------TAACAAG-G-GA-A----AT--------------------GTAAT-TTAG--------AAA---C--A-TCTCC-A-A
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              14750 36 +     17520 TA------------TAACAA--G-GGAA----AT--------------------GTAAT-TTAG--------AGA---C--G-TCTTC-A-A
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8580212 36 +  11848649 AA------------TAAGAAG-G-GA-A----AA--------------------GCCAT-TTAG--------ACA---T--A-TCAAC-A-T
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               29367 36 +     37189 TA------------TAACAA--G-GGAA----AT--------------------GTAAT-TTAG--------AGA---C--G-TCTTC-A-A
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          55073 36 -    147782 TA------------TAATAAG-G-TA-A----AT--------------------GTAAT-TTTG--------AAA---C--A-TCTTA-A-A
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lemur_catta.scaffold_1                                258412454 36 - 285822530 TA------------TAACAAG-A-GA-A----AT--------------------GTAAT-TTAG--------AAA---C--A-TCTCC-A-A
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        29782 36 +     39228 TA------------TAACAAG-G-GA-A----AT--------------------GTAAT-TTAG--------AAA---C--A-TCTCC-A-T
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            59146 36 +     63517 TA------------TAACAAG-G-GA-A----AT--------------------GTAAT-TTAG--------AAA---C--A-TCTCC-A-T
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        37528 36 -     38897 TA------------TAATAAG-G-GA-A----AT--------------------GTAAT-TTAG--------AAA---C--A-TCTCC-A-A
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      3572 36 -     13103 TA------------TAACAAG-G-GA-A----AT--------------------GTAAT-TTAG--------AAA---C--A-TCTCC-A-T
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3093280 36 -   3498232 TA------------TAACAA--G-GGAA----AT--------------------GTAAT-TTTG--------AGA---C--A-TCTTA-A-A
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    22058 36 +     22452 TA------------TAAACAAGA-GA-A----GT--------------------GTAAT-TTAA--------AGA---C--A-TCTT--A-A
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            141677 36 +   3060487 TA------------TAACAA--G-GGAA----AT--------------------GTAAT-TTAG--------AGA---C--G-TCTTC-A-A
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19253538 36 +  19376315 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCTTC-A-A
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           16309 36 +     84689 TG------------TAACAAG-A-GA-A----AA--------------------GTAAT-TGAG--------AGA---C--G-TCTTC-A-A
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3784042 36 +   6799190 TG------------TAACAAG-A-GA-A----AA--------------------GTAAT-TGAG--------AGA---C--A-TCTTC-A-A
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20599845 38 -  62548349 TA------------TATAAAG-T-GG-A----AT--------------------GGGAT-TTAG--------AGA---CAGA-TCTTC-A-A
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11097038 36 +  39895028 TA------------TAACAA--G-GGAA----AT--------------------GTGAT-TTGG--------AGA---C--A-TCATA-A-A
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             25287 36 +     74745 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCTTC-A-A
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12711750 36 +  12821369 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCTTC-A-A
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                4323 36 -     26467 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCTTC-A-A
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           52194 36 +     63263 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCTTC-A-A
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 4304 36 -     26361 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCTTC-A-A
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_2667654                                 607 36 -      5626 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCTTC-A-A
i Macaca_leonina.k141_2667654                           C 0 C 0
s Macaca_maura.k141_251854                                  50723 36 -     79256 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCTTC-A-A
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196040821 36 + 196197964 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCTTC-A-A
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11450991 36 +  11645122 TA------------Caataag-g-aa-a----at--------------------gtaat-ttCA--------AAA---C--A-TCTTC-A-A
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   9677 36 -     46448 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCTTC-A-A
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                7338 36 -     13212 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCTTC-A-A
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 21020 36 -     55006 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCTTC-A-A
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43846442 36 +  43892939 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCTTC-A-A
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               22304 36 -     24607 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCTTC-A-A
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               9674 36 -     27140 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCTTC-A-A
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                703757 23 +    802869 --------------------------------AT--------------------GCAAT-TTAG--------AGA---C--A-TCTTA-A-A
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43442710 36 -  43563597 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCTTC-A-A
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4455509 36 -   4543643 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCTTC-A-A
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            154034 36 +    252755 TA------------TAACAA--A-GGAA----AT--------------------gtcat-ttag--------aaa---c--a-ttttc-a-a
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             41631 36 +     58827 TA------------TAACAA--A-GGAA----AT--------------------gtcat-ttag--------aaa---c--a-ttttc-a-a
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36879288 36 +  64221397 GA------------TAGCAAG-G-GA-A----AT--------------------GTAAT-TTAG--------AGC---T--A-TCTGG-A-A
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       67540 36 -    234502 GG------------TAACAA--G-GGAA----TG--------------------GCAAT-TTCA--------AGG---C--A-TCTTC-C-A
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             8433 35 -     87323 TA------------TAACAA--G-GGAA----AT--------------------GTGAT--TTG--------AGA---C--A-TTTTA-A-A
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 3241 30 +    115071 ------------------AAG-G-GG-C----GT--------------------GTCAT-AGGA--------TGA---C--A-TCTAC-A-A
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1052876 36 -  26018355 TG------------TGACAAG-G-GG-C----AT--------------------GCTGT-ATCA--------AGA---C--T-TCTAC-A-A
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    4338 36 -     12939 TA------------TAACAA--G-GGAA----AT--------------------GTAAT-TTAG--------AGA---C--A-TCTCC-A-A
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16515506 36 +  47401472 TA------------TAACaag-g-aa-a----at--------------------gtaat-ttag--------aaa---C--A-TCTCC-A-A
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  44158 38 -     48017 TA------------TAAAA-T-A-TC-A----GT--------------------GGAAT-CAA----------GACAGAATA-TCTGC-A-A
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22825848 36 -  98408828 TG------------TAACAAG-G-AA-C----AT--------------------GTAAT-AGAA--------AGA---C--A-TCTAC-A-A
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         7256 36 +     29742 TA------------CGATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCTTC-A-A
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        18776 36 -    104932 TA------------TAACAA--G-GGAA----AT--------------------GTAAT-TTTG--------AGA---C--A-TCTTA-A-A
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     6201 36 -     12809 TA------------TAACAAG-A-AA-A----AT--------------------GTAAT-TTAG--------AAA---C--A-TCTCC-A-A
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 152113 36 +    154973 TA------------TAACAA--G-GGAA----AT--------------------GTAAT-TTAG--------AGA---C--G-TCTTC-A-A
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  8912 37 -     19904 TG------------TAATAA--G-GAAT----AC--------------------ATAATTTTAG--------AGA---C--A-TCTTC-A-G
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  152252 36 -    168139 TA------------TAACAA--G-GGAA----AT--------------------GGAAT-TTTG--------AGA---C--A-TCTTA-A-A
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Mus_caroli.LT608236.1                                  70773111 40 +  92629107 TG------------TAATGAG-A-GA-CATCCAT--------------------GTAGT-ATGA--------AGA---C--A-CCTTC-A-A
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75495178 40 +  98207768 TG------------TAATGAG-G-GA-CATCCAC--------------------GTACT-ATGA--------AGA---C--A-ACTTC-A-A
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67561909 40 +  89017189 TG------------TAATTTG-G-GA-CATACAT--------------------GTAGT-ATGA--------AGA---C--A-CTTTC-A-A
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74337886 40 +  97876770 TG------------TAATGAG-G-GA-CATCCAC--------------------GTAGT-ATGA--------AGA---C--A-CCTTC-A-A
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             15917 51 +     98495 AA------------TAACAAA-A-TA-A----AC--A-T--ACAGATTTGCAATGTATT-TTAG--------AGG---C--A-TCTGC-G-T
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4430530 36 -  28371801 TA------------TAACAA--G-GGAA----AT--------------------GTGAT-TTTG--------AGA---C--A-TCTTC-A-A
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     96661 16 -    117718 TATCAGTAGCCACATA----------------------------------------------------------------------------
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 I 31
s Myrmecophaga_tridactyla.MyrTri_scaffold_12795               117 38 -     87886 TA------------TGACAAG-G-GA-A----TG--------------------GTAAT-TTAG--------AGA---TGAA-TCTTC-A-A
i Myrmecophaga_tridactyla.MyrTri_scaffold_12795         C 0 C 0
s Nannospalax_galili.KL201303.1                            125598 31 +    362372 TA------------TAACAAG-G-GA-A----AT--------------------GTA------A--------AGA---C--A-TTTGT-G-A
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                              11517 36 +     48152 TA------------CAATAAG-G-AA-A----AT--------------------GTATT-TTCA--------AAA---C--A-TCCTC-A-A
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4492167 36 -  14209539 TA------------TAACAA--G-GGAA----AT--------------------GTAAT-TTTG--------AGA---C--A-TCTTA-A-A
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3956704 36 -   4490290 TA------------TAACAA--G-GGAA----AT--------------------GTAAT-TTAG--------AGA---C--G-TCTTC-A-A
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Nomascus_annamensis.k141_762468                            1322 36 -      2755 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTTG--------AAA---C--A-TCTTC-A-A
i Nomascus_annamensis.k141_762468                       C 0 C 0
s Nomascus_concolor.k141_256540                              7932 36 -      8966 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTTG--------AAA---C--A-TCTTC-A-A
i Nomascus_concolor.k141_256540                         C 0 C 0
s Nomascus_gabriellae.k141_1400361                           1873 36 -      2203 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTTG--------AAA---C--A-TCTTC-A-A
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_453                             7185 36 +     12787 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTTG--------AAA---C--A-TCTTC-A-A
i Nomascus_siki_b.tarseq_453                        C 0 C 0
s Nomascus_siki_a.k141_421408                                  1787 36 +     16235 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTTG--------AAA---C--A-TCTTC-A-A
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                39908 36 +   3668941 TA------------TAACAA--G-GGAA----AT--------------------GTGAC-TTGG--------AGA---C--A-TCATA-A-A
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65573079 34 -  95554990 TG------------TAAT--G-A-GA-A----AA--------------------GTACT-ATAG--------AGA---C--A-TCTTC-A-A
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_6040852                             716 34 +      1868 TG------------TAAT--G-A-GA-A----AA--------------------GTACT-ATAG--------AGA---C--A-TCTTC-A-A
i Nycticebus_coucang.k141_6040852                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65681260 34 +  89412551 TG------------TAAC--T-A-GA-A----AA--------------------GTACT-ATAG--------AAA---C--A-TCTTC-A-A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            5001121 31 -  23139505 TA------------TA------A-GA-A----TT--------------------TTAAT-TTAA--------GGA---C--ACTCTT--T-G
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3692023 16 +  10294119 ------------------------------------------------------G------Tag--------tga---t--a-ataac-a-a
i Octodon_degus.JH651621.1                              I 19 C 0
s Odocoileus_virginianus.KZ101650.1                       1085884 37 +   1425656 TG------------TAATAA--G-GAAA----AT--------------------GTAATTTTAG--------AGA---C--A-TCTTC-A-G
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         43941 37 +     78940 TG------------TAACAA--G-GAAA----AT--------------------GTAATTTTAG--------AGA---C--A-TCTTC-A-G
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  131654 36 +    145789 TG------------CAACAAG-G-AA-C----AT--------------------GTAAT-ATAA--------GGA---C--A-TCTAC-A-A
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  44588 36 +     62360 TG------------TAACAAG-G-AC-C----TT--------------------GTAGT-ATGA--------GGA---C--A-TCTAC-A-A
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7230385 36 -   7562323 TA------------TAACAA--G-GGAA----AT--------------------GTAAT-TTAG--------AGA---C--A-TCTTC-A-A
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              65222 38 -     66828 TG------------TAAAAAG-G-AG-A----AA--------------------GGAAT-TTAG--------AGA---CAGA-TCATC-A-A
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141885074 36 + 163896628 TA------------TAAACAAGA-GA-A----GT--------------------GTAAT-TTAA--------AGA---C--A-TCTT--A-A
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      317045 36 -    505867 TA------------TAACAA--G-GGAA----AT--------------------GTGAT-TTGG--------AGA---C--A-TCATA-A-A
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        6206 36 -     53940 TG------------TAACAAG-A-GA-A----AA--------------------GTACT-TTAG--------AGA---T--A-TCTTC-A-A
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18014172 36 -  38779656 TG------------TAACAAG-A-GA-A----AA--------------------GTACT-TTAG--------AGA---T--A-TCTTC-A-A
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134085144 37 - 275406953 TG------------TAATAA--G-GAAA----AT--------------------GTAATTTTAG--------AGA---C--A-TCTTC-A-G
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      86385 37 +    140051 TG------------TAATAA--G-GAAA----AT--------------------GTAATTTTAG--------AGA---C--A-TCTTC-A-G
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.AJFE02000020.1                                 632 36 -      1352 ta------------aaataag-g-aa-a----at--------------------gtaat-tttg--------aaa---c--a-TCTTC-A-A
i Pan_paniscus.AJFE02000020.1                           I 35 I 573
s Pan_troglodytes.KZ622857.1                               334528 36 +    772158 ta------------aaataag-g-aa-a----at--------------------gtaat-tttg--------aaa---c--a-TCTTC-A-A
i Pan_troglodytes.KZ622857.1                            I 5 I 375
s Panthera_onca.PanOnc_flattened_line_1615                  41807 36 +    295523 TA------------TAACAA--G-GGAA----AT--------------------GGAAT-TTTG--------AGC---T--A-TCTTA-A-A
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3645623 36 +  18214204 TA------------TAACAA--G-GGAA----AT--------------------GGAAT-TTTG--------AGC---T--A-TCTTA-A-A
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5035260 36 -   6340057 TA------------TAACAA--G-GGAA----AT--------------------GGAAT-TTTG--------AGC---T--A-TCTTA-A-a
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1074017 37 -   1292953 TG------------TAATAA--G-GAAA----AT--------------------GTAATTTTAG--------AGA---C--A-TCTTC-A-G
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188161499 36 - 188283584 TA------------CAATAAg-t-aa-a----at--------------------gtaat-ttca--------aaa---c--A-TCTTC-A-A
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              4589 36 +     25005 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCTTC-A-A
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47518871 36 +  47705337 TA------------CAATAAG-T-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCTTC-A-A
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 72862 36 -    104429 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCTTC-A-A
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   11394 36 +     14967 TA------------CAATAAG-T-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCTTC-A-A
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 7259 36 -      7628 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCTTC-A-A
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    123284 36 -    135482 TA------------TAACAA--G-GGAA----AT--------------------GGAAT-TTTG--------AGA---C--A-TCTTA-A-A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          11872 36 -     23713 TG------------TAACAAG-A-GA-A----AA--------------------GTACT-TTAG--------AGA---C--A-TCTTC-A-G
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           13023 36 +     61070 TG------------TAACAAG-A-GA-A----AA--------------------GTACT-TTAG--------AGA---C--A-TCTTC-A-G
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       3321 32 +     49596 TA------------TC---AG-G-AA-A----AT--------------------GTACT--TAG--------AGA---T--A-TCTGA-G-A
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615458.1                       2840401 36 -   3366660 TG------------TAACAAG-G-AC-T----TC--------------------GTAGT-ATGA--------GGA---C--A-TCTAC-A-A
i Peromyscus_maniculatus.KI615458.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    18049 16 -     36578 ------------------------------------------------------A------TTG--------AGA---T--A-TCATC-A-A
i Petromus_typicus.PetTyp_scaffold_33007                I 19 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              4845 36 +      8220 TA------------TAACAA--G-GGAA----AT--------------------GTAAT-TTAG--------AGA---C--G-TCTTC-A-A
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Piliocolobus_badius.k141_1987485                           5057 36 -      5908 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCTTC-A-A
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       5676 36 -     17985 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCTTC-A-A
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            5043 36 +      7694 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCTTC-A-A
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26743526 36 +  26888534 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCTTC-A-A
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990          11327 36 +     21690 TA------------TAACAA--G-GGAA----AT--------------------GTAAT-TTAG--------AGA---C--G-TCTTC-A-A
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       27164 36 +     44506 AA------------TAATAAG-G-TA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-ACTTA-A-A
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        27377 36 +     67491 AA------------TAATAAG-G-CA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCTTA-A-A
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      17616 36 -     98129 AA------------TAATAAG-G-TA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCTTA-A-A
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     27217 36 +    147771 AA------------TAATAAG-G-TA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCTTA-A-A
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         3852 36 -     43940 AA------------TAATAAG-G-TA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-ACTTA-A-A
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          7935 36 -     55515 AA------------TAATAAG-G-TA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCTTA-A-A
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         27289 36 +    152463 AA------------TAATAAG-G-TA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCTTA-A-A
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       5096 36 -    119457 AA------------TAATAAG-G-TA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCTTA-A-A
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         17011 36 +    134592 AA------------TAATAAG-G-TA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCTTA-A-A
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          27599 36 -     75465 AA------------TAATAAG-G-TA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCTTA-A-A
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              192230 36 -    373494 TA------------CGATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCTTC-A-A
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19812878 36 +  19899266 TA------------CGATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCTTC-A-A
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               8799 36 -     15069 TA------------TAATAAG-G-AA-A----AT--------------------GTAAT-TTCG--------AAA---C--A-TCCTC-A-A
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              8914 36 +     14865 TA------------TAATAAG-G-AA-A----AT--------------------GTAAT-TTCG--------AAA---C--A-TCCTC-A-A
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                5212 28 -      9567 TA------------TAAAAAG-G-GG-A----GC--------------------AGAGT-TTAG--------AGA---C-------------
i Procavia_capensis.ProCapCap_scaffold_149274           I 184 I 8
s Prolemur_simus.MPIZ01000048.1                           6853826 36 +  12164890 GA------------TAACAAG-A-GA-A----AT--------------------GTAAT-TTAG--------AAA---C--A-TCTCC-A-A
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     22634 36 -     30946 NN------------NNNNNNN-N-NN-N----NN--------------------NNNNT-TTAG--------AAA---C--A-TCTCC-A-A
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         8934 36 +     11805 TA------------TAAGAAG-G-GA-A----AT--------------------GTAAT-TTAG--------AAA---C--A-TCTCC-A-T
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           48268 36 +     52369 TA------------TAAGAAG-G-GA-A----AC--------------------ATAAT-TTAG--------AAA---C--A-TCTCC-A-G
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         40655 36 -     44753 TA------------TAAGAAG-G-GA-A----AT--------------------GTAAT-TTAG--------AAA---C--A-TCTCC-A-G
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            22578 36 +     27322 TA------------TAAGAAG-G-GA-A----AC--------------------GTAAT-TTAG--------AAA---C--A-TCTCC-A-G
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       22223 36 -     53241 TA------------TAAGAAG-G-GA-A----AT--------------------GTAAT-TTAG--------AAA---C--A-TCTCC-A-A
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         44486 36 -     48185 TA------------TAAGAAG-G-GA-A----AT--------------------GTAAT-TTAG--------AAA---C--A-TCTCC-A-A
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           40218 30 +     77221 ------------------AAG-G-GG-C----GT--------------------GTCAT-AGGA--------AGA---C--A-TCTAC-A-A
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        252176 36 -    344369 TA------------TAACAA--G-GGAA----AT--------------------GTGAT-TTTG--------AGA---C--A-TCTTA-A-A
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13248844 36 -  17261082 TA------------TAATAA--G-GGAA----AT--------------------GTAAT-TTAG--------AGA---C--A-TCTTA-A-A
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             606794 36 -   3946241 TA------------TAATAA--G-GGAA----AT--------------------GTAAT-TTAG--------AGA---C--A-TCTTA-A-A
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131541929 44 - 161321710 ta------------tattat--a-atat----at--------------------ataat-tatattacatataat---t--a-tatat-a-t
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             32905 36 +     56732 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCCTC-A-A
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6809402 36 +   6970761 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCCTC-A-A
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             8791 36 +     18040 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCCTC-A-A
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                22732 37 +     68503 TG------------TAATAA--G-GAAA----AT--------------------GTAATTTTAG--------AGA---C--A-TCTTC-A-G
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13918871 40 +  90463843 TG------------TAATGAG-G-GA-CATACAC--------------------AGAGT-GTGA--------AGA---C--A-CCTTC-T-A
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1794671 36 +   2252614 TA------------TAACGA--G-GGAA----CT--------------------GTCAT-TTAG--------AGA---C--A-TCTTC-A-A
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                            3170 36 -     17045 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCCTC-A-A
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206380657 36 - 206558726 TA------------Caataag-g-aa-a----at--------------------gtaat-ttCA--------AAA---C--A-TCCTC-A-A
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44859560 36 -  45163003 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCCTC-A-A
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                22189 36 +    109198 TA------------TAATAA--G-GGAA----AT--------------------GTAAT-TTAG--------AGA---C--A-TCTTA-A-A
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                      3400 37 -      4338 TG------------TAATAA--G-GAAA----AT--------------------GTAATTTTAG--------AGA---C--A-TCTTC-A-G
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15677612 37 -  43202129 TA------------TAATAAG-G-TA-A----AT--------------------GTAAT-TTTG--------AAA---C--A-TCTTAAA-G
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        9526 37 +     34089 TA------------TAATAAG-G-TA-A----AT--------------------GTAAT-TTTG--------AAA---C--A-TCTTAAA-G
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              9465 37 -     60842 TA------------TAATAAG-G-TA-A----AT--------------------GTAAT-TTTG--------AAA---C--A-TCTTAAA-G
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              9559 37 +     67014 TA------------TAATAAG-G-TA-A----AT--------------------GTAAT-TTTG--------AAA---C--A-TCTTAAA-G
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              9536 37 +     60816 TA------------TAATAAG-G-TA-G----AT--------------------GTAAT-TTTG--------AAA---C--A-TCTTAAA-G
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 9473 37 -     76454 TA------------TAATAAG-G-TA-G----AT--------------------GTAAT-TTTG--------AAA---C--A-TCTTAAA-G
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17346243 37 -  30362882 TA------------TAATAAG-G-TA-A----AT--------------------GTAAT-TTTG--------AAA---C--A-TCTTAAA-A
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         25564 37 -     62485 TA------------TAATAAG-G-TA-A----AT--------------------GTAAT-TTTG--------AAA---C--A-TCTTAAA-A
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   41463 30 -    114521 TG------------TAACAA--G-GA-A----AT--------------------GT------AG--------AGG---T--A-TCTTC-A-A
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        6406 36 +     15331 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCCTC-A-A
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      11781 36 +     20762 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCCTC-A-A
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         121785 36 +    130994 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCCTC-A-A
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           40565 36 +     46263 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCCTC-A-A
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     33710 36 +     42640 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCCTC-A-A
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        16732 36 +     30600 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-CCCTC-A-A
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  106765 36 -    120886 TG------------TAACAAG-G-AA-C----AT--------------------GAAGT-ATAA--------AAA---C--A-TCTAC-A-A
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            26117 36 +    739146 TG------------TAACAA--GGGA-A----AT--------------------ATAAT-TTAG--------AGA---T--A-TCTTC-A-G
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17776448 35 -  27805282 ta------------taacaa--g-ga-a----at--------------------aaaaa-tgag--------aaa---t--a-tcttC-A-A
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2245123 36 +   2842873 GA------------TAGCAAG-G-GA-A----AT--------------------GTAAT-TTAG--------AGC---T--A-TCTGG-A-A
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             240953 36 -    276980 TA------------TAACAA--G-GGAA----AT--------------------GTGAT-TTTG--------AGA---C--A-TCTTA-A-A
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            35153 36 +     62062 TA------------TAACAA--G-GGAA----AT--------------------GGAAT-TTTG--------AGA---C--A-TCTTA-A-A
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189277149 36 + 218635234 TA------------TAACAA--G-GGAA----AT--------------------GTAAT-TTAG--------AGA---C--A-TCTTT-A-A
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        19910 36 -  13920577 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTTG--------AAA---C--A-TCTTC-A-A
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               18386 38 +     45698 TA------------TGACAAG-G-AA-A----TG--------------------GTAAT-TTAG--------AGA---TGAA-TCCTC-A-A
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      812742 36 +   1148477 TA------------AAACAA--G-GGAA----AT--------------------ATAAT-TTGG--------AGA---C--A-TCTTC-A-A
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  63384 36 +     99546 TA------------AAACAA--G-GGAA----AT--------------------ATAAT-TTAG--------AGA---C--A-TCTTC-A-A
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194013032 36 - 194193292 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCTTC-A-A
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                  1569 38 -      3104 TA------------TAACAAG-G-GA-A----AT--------------------GTAAT-TTAG--------AGA---CAAA-TCTTC-A-A
i Tolypeutes_matacus.TolMat_scaffold_475685             C 0 C 0
s Trachypithecus_auratus.k141_738098                        30053 36 +     38948 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCCTC-A-A
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   23613 36 -     32910 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCCTC-A-A
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      5514 36 -     12939 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCCTC-A-A
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       4942 36 -     14244 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCCTC-A-A
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           46335 36 -     54611 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCCTC-A-A
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        4136 36 -     11566 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCCTC-A-A
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     6320 36 -     15592 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCCTC-A-A
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          4972 36 +     14371 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCCTC-A-A
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   3258 36 +     12481 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCCTC-A-A
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        3239 36 -     24393 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCCTC-A-A
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       8383 36 -     28054 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCCTC-A-A
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44663167 36 -  44834318 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCCTC-A-A
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       5479 36 +     13828 TA------------CAATAAG-G-AA-A----AT--------------------GTAAT-TTCA--------AAA---C--A-TCCTC-A-A
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                  10900 36 +     90398 TA------------TAACAA--G-AAAA----AT--------------------GCAAT-TTAG--------AGA---C--A-TCTTC-A-G
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16090919 38 +  31416278 TA------------TAAAAAG-G-GG-A----AT--------------------GGAAT-TTAG--------AGA---CATA-GCTTC-A-A
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2802168 35 -   3938065 TG------------TAACA-G-G-GA-A----AT--------------------GTAAT-TTAG--------AGA---C--A-TCTTC-A-A
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                   10996 35 +     13056 TG------------TAACA-G-G-GA-A----AT--------------------GTAAT-TTAG--------AGA---C--A-TCTTC-A-A
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69319115 36 -  96451834 TA------------TAACAA--G-GGAA----AT--------------------GTAAT-TTAG--------AGA---C--G-TCTTC-A-A
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                    1855 29 +    136657 TG------------TAACAA--A--A-A----AT--------------------AT------AG--------GAA---T--A-TCTTC-A-A
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 C 0
s Ursus_maritimus.KK498671.1                              6522604 35 +  28682327 TA------------TAACAA--G-GGAA----AT--------------------GTGAT-TT-G--------AGA---C--A-GCTTA-A-A
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                 10499 36 -     20643 TA------------TAACAAG-A-GA-A----AT--------------------GTAAT-TTAG--------AAA---C--A-TCTCC-A-A
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             30034 36 -     33872 TA------------TAACAAG-A-GA-A----AT--------------------GTAAT-TTAG--------AAA---C--A-TCTCC-A-A
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1530144 36 -   2331223 TA------------TAACAA--G-GGAA----AT--------------------GTAAT-TTAG--------AGA---C--A-TCTTC-A-A
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                146272 36 -    281493 TA------------TAACAA--G-GGAA----AT--------------------GTGAT-TTGG--------AGA---C--A-TCATA-A-A
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       132619 36 -    134049 GA------------TAGCAAG-G-GA-A----AT--------------------GTAAT-TTAG--------AGC---T--A-TCTGG-A-A
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_202118                     2234 36 -      3360 AA------------TAAGAAG-G-GA-A----AT--------------------GCAAT-TTAG--------ACA---C--A-TCATC-A-G
i Zapus_hudsonius.ZapHud_scaffold_202118                C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            3704 36 -     13665 TA------------TAACAA--G-GGAA----AT--------------------GTAAT-TTAG--------AGA---C--G-TCTTC-A-A
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Eptesicus_fuscus.JH977687.1                             4710851  0 +   6522550 C
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Zalophus_californianus.ZalCal_flattened_line_4097        221654  0 -    227762 C
e Tonatia_saurophila.TonSau_scaffold_3334                  140002  0 -    259118 C
e Tadarida_brasiliensis.TadBra_scaffold_61492                4259  0 +     20549 C
e Pteronotus_parnellii.KE867983.1                            7995  0 -     27784 C
e Pipistrellus_pipistrellus.PipPip_scaffold_3306           101415  0 +    112873 C
e Odobenus_rosmarus.KB229369.1                             686793  0 -   3126709 C
e Noctilio_leporinus.NocLep_scaffold_12062                  52626 31 +     94413 I
e Myotis_myotis.MyoMyo_scaffold_6123                        15918  0 +     66751 C
e Myotis_lucifugus.GL429887.1                             3470691  0 -   3747815 C
e Myotis_davidii.KB114863.1                               5024262  0 +   6462685 C
e Myotis_brandtii.KE161952.1                               973184  0 +   8389877 C
e Murina_feae.MurFea_scaffold_2254                          26170  0 -    100666 C
e Mormoops_blainvillei.MorMeg_scaffold_2952                165343  0 +    265003 C
e Miniopterus_schreibersii.MinSch_scaffold_24116            39640  0 +     45743 C
e Miniopterus_natalensis.LDJU01000022.1                   8215181  0 +  10048721 C
e Micronycteris_hirsuta.MicHir_scaffold_37978               26828  0 -     32043 C
e Lasiurus_borealis.LasBor_scaffold_59542                    7402  0 +     26176 C
e Desmodus_rotundus.KZ672188.1                           18703091  0 -  18957592 C
e Carollia_perspicillata.CarPer_scaffold_4436               63873  0 +     67245 C
e Artibeus_jamaicensis.ArtJam_scaffold_41619                12877  0 -     29036 C
e Anoura_caudifer.AnoCau_scaffold_422                      394587  0 -    631301 C
e Hylobates_pileatus_a.tarseq_592                             37267 2881 -     60944 I
e Tarsius_wallacei.k141_48636                               64696  0 +     65473 C
e Tarsius_lariang.k141_609102                               31387  0 +     42269 C
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Cephalopachus_bancanus.k141_702587                        12545  0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530  0 +    345090 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               18659 4 +    209709 AA-AC
s Acinonyx_jubatus.LLWD01000356.1                         2041429 4 +   3721120 GG-TA
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    119147 4 -    189883 GG-AG
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10665372 4 +  23371972 GG-AG
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7102321 4 -  16596857 GG-AG
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_141108                   2500 4 -      7259 GT-AG
i Allactaga_bullata.AllBul_scaffold_141108              C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   6545 4 -     60446 AA-AC
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         7259 4 -     29318 AA-AC
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         6197 4 +     38766 AA-AC
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          7155 4 -     80423 AA-AC
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              2103 4 +     19852 AA-AC
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                4323 4 -     12443 AA-AC
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                             1646 4 +      5070 AA-AC
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                 1393 4 -      1641 AA-AC
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          4132 4 -     24210 AA-AC
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_494922                              636 4 -      8325 AA-AC
i Alouatta_nigerrima.k141_494922                        C 0 C 0
s Alouatta_palliata.k141_405616                              6550 4 +     16794 AA-AC
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_347198                              579 4 +      9111 AA-AC
i Alouatta_puruensis.k141_347198                        C 0 C 0
s Alouatta_seniculus.k141_790278                             5827 4 -      9835 AA-AC
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3528575 4 +   4113121 GA-AG
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             5738 4 +     55446 GA-AG
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 67437 4 +     78111 AA-AC
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                           10381 4 +     22701 AA-AC
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5754348 3 +   9889416 aa-a-
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                            10925 4 -    104377 AA-AC
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                              10954 4 +     23246 AA-AC
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     3587 4 +     11424 GG-AG
i Aplodontia_rufa.AprRuf_scaffold_101456                I 8 C 0
s Arctocebus_calabarensis.k141_587554                        7526 4 +      9265 GG-AG
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9544237 4 +  39197703 AA-AC
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             65511 4 +     85812 AA-AC
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                16521 4 +     89302 AA-AC
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             21025 4 -     58268 AA-AC
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             69019 4 +    119057 AA-AC
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              10988 4 -     25888 AA-AC
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                12062 4 -     16375 GG-AG
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               5678 4 +      6337 GG-AG
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26385964 4 +  51448160 GG-AG
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                       11137 4 -     13118 GG-AG
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   50532 4 -     72089 GA-AG
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   305495 4 -   6870073 GA-AG
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22959601 4 + 161108492 GA-AG
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     421780 4 +    998990 GA-AG
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22668253 4 + 158972876 GA-AG
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               677091 4 +   1914593 GA-AG
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               118857 4 -    171031 AA-AC
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 17877 4 +    125063 AA-AC
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                19924 4 -    216513 AA-AC
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       12467 4 -    134917 AA-AC
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3225072 4 -   8989139 AG-AG
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           402772 4 -  15254737 AG-AG
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2978510 4 +   6889770 AG-AG
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11528224 4 +  39901454 GG-AG
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   23198 4 +     87036 GG-AG
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11275121 4 -  35597290 GG-AG
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11097618 4 +  39895921 GG-AG
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16464403 4 -  44759192 GG-AG
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21336008 4 + 157394656 GA-AG
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135714361 4 - 157403528 GA-AG
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_1011243                   20 4 +      1208 GG-AA
i Capromys_pilorides.CapPil_scaffold_1011243            n 51 C 0
s Castor_canadensis.CasCan_scaffold_1326                     1071 4 -    202837 GG-AA
i Castor_canadensis.CasCan_scaffold_1326                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   164811 4 -    276539 GG-AG
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15790752 4 -  24422027 GG-AA
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15802697 4 -  24440124 GG-AA
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       180869 4 +    436027 GG-AA
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18896592 4 -  29618158 AA-AC
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                13242 4 -     26817 AA-AC
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                17486 4 +     25043 AA-AC
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4370045 4 +   7569818 GG-AT
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_171732          202 4 +      8380 GG-AT
i Ceratotherium_simum_cottoni.CerCot_scaffold_171732    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6560485 4 +   6739814 AA-AC
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      31962 4 +     60454 AA-AC
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          7166 4 -     21101 AA-AC
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         64476 4 -    107033 AA-AC
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        7336 4 -     17608 AA-AC
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          4504 4 +     45019 AA-AC
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           4780 4 +     15177 AA-AC
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          7386 4 +     16677 AA-AC
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           29582 4 +     35983 AA-AC
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11996107 4 +  12117833 AA-AC
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46483089 4 +  46592721 AA-AC
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                       1200 4 -     27215 AA-AC
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       7400 4 +     35577 AA-AC
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        7194 4 -     25661 AA-AC
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        7366 4 -     17744 AA-AC
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        26735 4 +     37128 AA-AC
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           5762 4 -      6963 GG-AG
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           64278 4 -     68416 GG-AG
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_854352                             580 4 +     27737 GG-AG
i Cheirogaleus_medius.k141_854352                       C 0 C 0
s Cheracebus_lucifer.k141_619653                            10548 4 -     18223 AA-AC
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              2289 4 +    188999 AA-AC
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           46588 4 +     57117 AA-AC
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          51268 4 +     54541 AA-AC
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15965436 4 +  43084221 GG-AA
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         76069 4 +    196370 AA-AC
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          20250 4 +     40510 AA-AC
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15144920 4 -  15256731 AA-AC
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      39384 4 -     53260 AA-AC
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101149943 4 + 101219884 AA-AC
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                19785 4 -     21363 GG-AG
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           765089 4 +    964067 GG-AG
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_304221               365 5 -      7053 GAAGG
i Chrysochloris_asiatica.ChrAsi_scaffold_304221         C 0 C 0
s Colobus_angolensis.KN985967.1                          10889715 4 +  10971483 AA-AC
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147667643 4 + 156195979 AA-AC
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            19626 4 +     23629 AA-AC
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60624065 4 +  78930452 TG-AA
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         4459 4 -      5782 AA-AG
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 284052 4 -    399297 GG-AG
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53036362 4 +  72327488 GG-AA
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              3946 4 -     22648 GG-AG
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            59441 4 -     70449 GG-AG
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  216186 4 -    956709 GG-AG
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 36961 4 -     67205 GA-AA
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                21946 4 +     26546 GG-AA
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             63090 4 -    236241 GG-AA
i Dasyprocta_punctata.DasPun_flattened_line_634         I 7 C 0
s Dasypus_novemcinctus.JH568778.1                          186806 4 -   6883506 GG-AG
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16850224 4 +  31942871 GG-AC
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80042556 4 -  96802777 GG-AG
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 328444 4 +    993696 TG-AT
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   9078 4 +    151128 GG-AT
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   160911 4 +    228994 GG-AA
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3661360 4 +   4240102 GA-AA
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  3734 4 -     11986 GA-AA
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                41655 4 -     73477 GG-AA
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           23002570 5 -  44670279 GAAAG
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 15169 4 +     24177 GG-AG
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1498490 4 +   1727528 GA-AG
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7835526 4 +  15467074 TA-AG
i Elephantulus_edwardii.JH947210.1                      I 201 C 0
s Ellobius_lutescens.LOEQ01003611.1                        245048 4 -    369425 GG-AG
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01076532.1                           1400 4 +      9159 GG-AG
i Ellobius_talpinus.LOJH01076532.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85879368 4 +  99434291 GG-AG
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Equus_asinus.JREZ01000062.1                             5858307 4 -   7175178 GG-AT
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13356793 4 +  41866177 GG-AT
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          18283 4 +     92910 GG-AT
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11543456 4 +  16010500 GG-AG
i Erinaceus_europaeus.JH835290.1                        I 1 C 0
s Erythrocebus_patas.Contig8                             48781953 4 -  48907691 AA-AC
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          320807 4 +    330699 GG-AG
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             67263 4 +     89355 GG-AG
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                             10342 4 +     13586 GG-AG
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_1015201                              3601 4 -      4292 GG-AG
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            16738 4 +     36558 GG-AG
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            13060 4 +     60246 GG-AG
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                16545 4 +    109717 GG-AG
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 4528 4 -     19505 GG-AG
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                21203 4 +     27497 GG-AG
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           23659 4 +     26808 GG-AG
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                38391 4 +     46535 GG-AG
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              21132 4 -     29447 GG-AG
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129901078 4 - 159252932 GG-AA
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129288055 4 - 158578461 GG-AA
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 29245 4 +     52776 GG-AA
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13897382 4 -  19261668 GG-AA
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     216381 4 -    847004 GG-AG
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           18743 4 -     43889 GG-AG
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          15884 4 +     27357 GG-AG
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               160666 4 +    324696 GG-AG
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    188258 4 -    189561 GA-AG
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           17576 4 -     18683 GG-AG
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                              10356 4 -     14630 AA-AC
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119657456 4 - 195582420 AA-AC
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   80894 4 +    118900 GT-AA
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         7132 4 +     10286 GG-AG
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             5613 4 -     11661 GG-AG
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                            10937 4 +     56096 GG-AG
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        34186 4 -     42470 GG-AG
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        50812 4 -     54384 GG-AG
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              24559 4 +     53719 GG-AG
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                35399 4 -     91191 GA-AG
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2561712 4 +  31725842 GG-AA
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               64144 4 +     73687 GG-AG
i Heterohyrax_brucei.HetBruBak_scaffold_25354           I 8 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              152607 4 +    277961 GG-AG
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      285655 4 -    477199 GG-AG
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959               3340 4 +     26078 GG-AG
i Hipposideros_galeritus.HipGal_scaffold_52959          C 0 C 0
s Hoolock_leuconedys.ctg79                                     10281 4 -   7690867 AA-AC
i Hoolock_leuconedys.ctg79                                 I 36 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 24995 4 -     67322 GG-AG
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           22299 4 -    119109 GG-AA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_1816750                             2852 4 +      3202 AA-AC
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1136966                               861 4 +      9785 AA-AC
i Hylobates_agilis.k141_1136966                         C 0 C 0
s Hylobates_klossii.k141_468230                              4341 4 +      5464 AA-AC
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14629687 4 -  25970782 AA-AC
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            2239 4 +      4161 AA-AC
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                    10623 4 +     22540 GG-AG
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7131458 4 +  13083262 gg-ag
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   2674 4 +      3484 GG-AG
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              14786 4 +     17520 GG-AG
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8580248 4 +  11848649 GT-AT
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               29403 4 +     37189 GG-AG
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          55109 4 -    147782 AA-AC
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lemur_catta.scaffold_1                                258412490 4 - 285822530 GG-AG
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        29818 4 +     39228 GG-AG
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            59182 4 +     63517 GG-AG
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        37564 4 -     38897 GG-AG
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      3608 4 -     13103 GG-AG
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3093316 4 -   3498232 GA-AG
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    22094 4 +     22452 GG-AT
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            141713 4 +   3060487 GG-AG
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19253574 4 +  19376315 AA-AC
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           16345 4 +     84689 GG-AG
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3784078 4 +   6799190 GG-AG
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20599883 4 -  62548349 GG-AG
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11097074 4 +  39895028 GG-AG
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             25323 4 +     74745 AA-AC
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12711786 4 +  12821369 AA-AC
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                4359 4 -     26467 AA-AC
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           52230 4 +     63263 AA-AC
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 4340 4 -     26361 AA-AC
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_2667654                                 643 4 -      5626 AA-AC
i Macaca_leonina.k141_2667654                           C 0 C 0
s Macaca_maura.k141_251854                                  50759 4 -     79256 AA-AC
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196040857 4 + 196197964 AA-AC
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11451027 4 +  11645122 AA-AC
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   9713 4 -     46448 AA-AC
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                7374 4 -     13212 AA-AC
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 21056 4 -     55006 AA-AC
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43846478 4 +  43892939 AA-AC
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               22340 4 -     24607 AA-AC
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               9710 4 -     27140 AA-AC
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                703780 4 +    802869 GG-AG
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43442746 4 -  43563597 AA-AC
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4455545 4 -   4543643 AA-AC
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            154070 4 +    252755 gG-AG
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             41667 4 +     58827 gG-AG
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36879324 4 +  64221397 GG-AG
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       67576 4 -    234502 GG-AG
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 I 1
s Mellivora_capensis.MelCap_flattened_line_15433             8468 4 -     87323 GG-AG
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 I 8
s Meriones_unguiculatus.MerUng_scaffold_9483                 3271 4 +    115071 GG-AG
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1052912 4 -  26018355 GG-AA
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    4374 4 -     12939 GG-AG
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16515542 4 +  47401472 GG-AG
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  44196 5 -     48017 GAAAG
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22825884 4 -  98408828 GG-AG
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         7292 4 +     29742 AA-AC
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        18812 4 -    104932 GA-AG
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     6237 4 -     12809 GG-AG
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 152149 4 +    154973 GG-AG
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  8949 4 -     19904 GA-AG
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  152288 4 -    168139 GG-AG
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Mus_caroli.LT608236.1                                  70773151 4 +  92629107 AG-AG
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75495218 4 +  98207768 AG-AG
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67561949 4 +  89017189 AC-AG
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74337926 4 +  97876770 AA-AG
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             15968 4 +     98495 AG-CA
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4430566 4 -  28371801 GG-AG
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     96708 4 -    117718 GG-AA
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 31 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_12795               155 4 -     87886 GG-AG
i Myrmecophaga_tridactyla.MyrTri_scaffold_12795         C 0 C 0
s Nannospalax_galili.KL201303.1                            125629 4 +    362372 AG-AG
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                              11553 4 +     48152 AA-AC
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4492203 4 -  14209539 GA-AG
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3956740 4 -   4490290 GG-AG
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Nomascus_annamensis.k141_762468                            1358 4 -      2755 AA-AC
i Nomascus_annamensis.k141_762468                       C 0 I 20
s Nomascus_concolor.k141_256540                              7968 4 -      8966 AA-AC
i Nomascus_concolor.k141_256540                         C 0 C 0
s Nomascus_gabriellae.k141_1400361                           1909 4 -      2203 AA-AC
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_453                             7221 4 +     12787 AA-AC
i Nomascus_siki_b.tarseq_453                        C 0 C 0
s Nomascus_siki_a.k141_421408                                  1823 4 +     16235 AA-AC
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                39944 4 +   3668941 GG-AG
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65573113 4 -  95554990 GG-AG
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_6040852                             750 4 +      1868 GG-AG
i Nycticebus_coucang.k141_6040852                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65681294 4 +  89412551 GG-TG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            5001152 4 -  23139505 GG-AT
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3692039 4 +  10294119 ta-aa
i Octodon_degus.JH651621.1                              C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1085921 4 +   1425656 CA-AG
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         43978 4 +     78940 GA-AG
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  131690 4 +    145789 GG-AG
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  44624 4 +     62360 GG-AG
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7230421 1 -   7562323 G----
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              65260 4 -     66828 GA-GG
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141885110 4 + 163896628 GG-AT
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      317081 4 -    505867 GG-AG
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        6242 4 -     53940 GG-AG
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18014208 4 -  38779656 GG-AG
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134085181 4 - 275406953 GA-AG
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      86422 4 +    140051 GA-AG
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127579635 4 - 205426864 AA-AC
i Pan_paniscus.CM003386.1                               I 36 C 0
s Pan_troglodytes.CM009241.2                            120156795 4 - 196562556 AA-AC
i Pan_troglodytes.CM009241.2                            I 36 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  41843 4 +    295523 GG-AA
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3645659 4 +  18214204 GG-AA
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5035296 4 -   6340057 gg-aa
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1074054 4 -   1292953 GA-AG
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188161535 4 - 188283584 AA-AC
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              4625 4 +     25005 AA-AC
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47518907 4 +  47705337 AA-AC
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 72898 4 -    104429 AA-AC
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   11430 4 +     14967 AA-AC
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 7295 4 -      7628 AA-AC
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    123320 4 -    135482 GA-AG
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          11908 4 -     23713 GG-AC
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           13059 4 +     61070 GG-AC
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       3353 4 +     49596 GA-AA
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615458.1                       2840437 4 -   3366660 GG-AG
i Peromyscus_maniculatus.KI615458.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    18065 4 -     36578 GG-AA
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              4881 4 +      8220 GG-AG
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Piliocolobus_badius.k141_1987485                           5093 4 -      5908 AA-AC
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       5712 4 -     17985 AA-GC
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            5079 4 +      7694 AA-GC
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26743562 4 +  26888534 AA-AC
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990          11363 4 +     21690 GG-AG
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       27200 4 +     44506 AA-AC
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        27413 4 +     67491 AA-AC
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      17652 4 -     98129 AA-AC
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     27253 4 +    147771 AA-AC
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         3888 4 -     43940 AA-AC
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          7971 4 -     55515 AA-AC
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         27325 4 +    152463 AA-AC
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       5132 4 -    119457 AA-TC
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         17047 4 +    134592 AA-AC
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          27635 4 -     75465 AA-AC
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              192266 4 -    373494 AA-AC
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19812914 4 +  19899266 AA-AC
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               8835 4 -     15069 AA-AC
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              8950 4 +     14865 AA-AC
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                5248 4 -      9567 GG-AG
i Procavia_capensis.ProCapCap_scaffold_149274           I 8 C 0
s Prolemur_simus.MPIZ01000048.1                           6853862 4 +  12164890 GG-AG
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     22670 4 -     30946 GG-AG
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         8970 4 +     11805 GG-AG
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           48304 4 +     52369 GG-AG
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         40691 4 -     44753 GG-AG
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            22614 4 +     27322 GG-AG
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       22259 4 -     53241 GG-AG
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         44522 4 -     48185 GG-AG
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           40248 4 +     77221 GG-AG
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        252212 4 -    344369 GG-AG
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13248880 4 -  17261082 GG-AG
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             606830 4 -   3946241 GG-AG
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131541973 4 - 161321710 aa-ta
i Puma_concolor.QAVW01000427.1                          C 0 T 189
s Pygathrix_cinerea.k141_374971                             32941 4 +     56732 AA-AC
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6809438 4 +   6970761 AA-AC
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             8827 4 +     18040 AA-AC
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                22769 4 +     68503 GA-AG
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13918911 4 +  90463843 AG-AG
i Rattus_norvegicus.chr11                               C 0 I 1729
s Rhinolophus_sinicus.LVEH01000179.1                      1794707 4 +   2252614 GG-AG
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                            3206 4 -     17045 AA-AC
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206380693 4 - 206558726 AA-AC
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44859596 4 -  45163003 AA-AC
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                22225 4 +    109198 GG-AG
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                      3437 4 -      4338 GA-AG
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15677649 4 -  43202129 AA-AC
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        9563 4 +     34089 AA-AC
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              9502 4 -     60842 AA-AC
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              9596 4 +     67014 AA-AC
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              9573 4 +     60816 AA-AC
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 9510 4 -     76454 AA-AC
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17346280 4 -  30362882 AA-AC
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         25601 4 -     62485 AA-AC
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   41493 4 -    114521 CG-AG
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        6442 4 +     15331 AA-AC
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      11817 4 +     20762 AA-AC
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         121821 4 +    130994 AA-AC
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           40601 4 +     46263 AA-AC
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     33746 4 +     42640 AA-AC
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        16768 4 +     30600 AA-AC
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  106801 4 -    120886 GG-AA
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            26153 4 +    739146 GA-AG
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17776483 4 -  27805282 GG-AG
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2245159 4 +   2842873 GG-AG
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             240989 4 -    276980 GG-AG
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            35189 4 +     62062 GG-AG
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189277185 4 + 218635234 GG-AA
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        19946 4 -  13920577 AA-AC
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               18424 4 +     45698 GG-AG
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      812778 4 +   1148477 GG-AT
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  63420 4 +     99546 GG-AT
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194013068 4 - 194193292 AA-AC
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                  1607 4 -      3104 GG-AG
i Tolypeutes_matacus.TolMat_scaffold_475685             C 0 C 0
s Trachypithecus_auratus.k141_738098                        30089 4 +     38948 AA-AC
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   23649 4 -     32910 AA-AC
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      5550 4 -     12939 AA-AC
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       4978 4 -     14244 AA-AC
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           46371 4 -     54611 AA-AC
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        4172 4 -     11566 AA-AC
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     6356 4 -     15592 AA-AC
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          5008 4 +     14371 AA-AC
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   3294 4 +     12481 AA-AC
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        3275 4 -     24393 AA-AC
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       8419 4 -     28054 AA-AC
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44663203 4 -  44834318 AA-AC
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       5515 4 +     13828 AA-AC
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                  10936 4 +     90398 GA-AG
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16090957 4 +  31416278 GG-AA
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2802203 4 -   3938065 GG-AA
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                   11031 4 +     13056 GG-AA
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69319151 1 -  96451834 G----
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                    1884 4 +    136657 GA-AA
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 C 0
s Ursus_maritimus.KK498671.1                              6522639 4 +  28682327 GG-AG
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                 10535 4 -     20643 GG-AG
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             30070 4 -     33872 GG-AG
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1530180 4 -   2331223 AG-AG
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                146308 4 -    281493 AG-AG
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       132655 4 -    134049 TG-AA
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_202118                     2270 4 -      3360 GT-AG
i Zapus_hudsonius.ZapHud_scaffold_202118                C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            3740 4 -     13665 GG-AG
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Eptesicus_fuscus.JH977687.1                             4710851 0 +   6522550 C
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Zalophus_californianus.ZalCal_flattened_line_4097        221654 0 -    227762 C
e Tonatia_saurophila.TonSau_scaffold_3334                  140002 0 -    259118 C
e Tadarida_brasiliensis.TadBra_scaffold_61492                4259 0 +     20549 C
e Pteronotus_parnellii.KE867983.1                            7995 0 -     27784 C
e Pipistrellus_pipistrellus.PipPip_scaffold_3306           101415 0 +    112873 C
e Odobenus_rosmarus.KB229369.1                             686793 0 -   3126709 C
e Noctilio_leporinus.NocLep_scaffold_12062                  52626 31 +     94413 I
e Myotis_myotis.MyoMyo_scaffold_6123                        15918 0 +     66751 C
e Myotis_lucifugus.GL429887.1                             3470691 0 -   3747815 C
e Myotis_davidii.KB114863.1                               5024262 0 +   6462685 C
e Myotis_brandtii.KE161952.1                               973184 0 +   8389877 C
e Murina_feae.MurFea_scaffold_2254                          26170 0 -    100666 C
e Mormoops_blainvillei.MorMeg_scaffold_2952                165343 0 +    265003 C
e Miniopterus_schreibersii.MinSch_scaffold_24116            39640 0 +     45743 C
e Miniopterus_natalensis.LDJU01000022.1                   8215181 0 +  10048721 C
e Micronycteris_hirsuta.MicHir_scaffold_37978               26828 0 -     32043 C
e Lasiurus_borealis.LasBor_scaffold_59542                    7402 0 +     26176 C
e Desmodus_rotundus.KZ672188.1                           18703091 0 -  18957592 C
e Carollia_perspicillata.CarPer_scaffold_4436               63873 0 +     67245 C
e Artibeus_jamaicensis.ArtJam_scaffold_41619                12877 0 -     29036 C
e Anoura_caudifer.AnoCau_scaffold_422                      394587 0 -    631301 C
e Hylobates_pileatus_a.tarseq_592                             37267 2881 -     60944 I
e Tarsius_wallacei.k141_48636                               64696 0 +     65473 C
e Tarsius_lariang.k141_609102                               31387 0 +     42269 C
e Pithecia_vanzolinii.k141_831006                           15424 0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514 0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521 0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292 0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093 0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038 0 +     78826 C
e Pithecia_albicans.k141_991845                             45662 0 -     61926 C
e Cephalopachus_bancanus.k141_702587                        12545 0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530 0 +    345090 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               18663 20 +    209709 AGTT--GCATAATT----TA--ACTA-A-T
s Acinonyx_jubatus.LLWD01000356.1                         2041433 20 +   3721120 GGTT--ACATAATT----TG--AC-AAA-A
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    119151 20 -    189883 GGCA--GCACAATT----TA--ATA--AGT
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10665376 20 +  23371972 GATT--gcataatt----ta--ac-aaa-t
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7102325 20 -  16596857 GGTT--GCATAact----ta--ac-aaa-t
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_141108                   2504 20 -      7259 GTCA--GCATGATT----TA--ACA--AAT
i Allactaga_bullata.AllBul_scaffold_141108              C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   6549 20 -     60446 AGTT--GCATAATT----TA--ACAA-A-T
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         7263 20 -     29318 AGTT--GCATAATT----TA--ACAA-A-T
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         6201 20 +     38766 AGTT--GCATAATT----TA--ACAA-A-T
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          7159 20 -     80423 AGTT--GCATAATT----TA--ACAA-A-T
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              2107 20 +     19852 AGTT--GCATAATT----TA--ACAA-A-T
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                4327 20 -     12443 AGTT--GCATAATT----TA--ACAA-A-T
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                             1650 20 +      5070 AGTT--GCATAATT----TA--ACAA-A-T
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                 1397 20 -      1641 AGTT--GCATAATT----TA--ACAA-A-T
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          4136 20 -     24210 AGTT--GCATAATT----TA--ACAA-A-T
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_494922                              640 20 -      8325 AGTT--GCATAATT----TA--ACAA-A-T
i Alouatta_nigerrima.k141_494922                        C 0 C 0
s Alouatta_palliata.k141_405616                              6554 20 +     16794 AGTT--GCATAATT----TA--ACAA-A-T
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_347198                              583 20 +      9111 AGTT--GCATAATT----TA--ACAA-A-T
i Alouatta_puruensis.k141_347198                        C 0 C 0
s Alouatta_seniculus.k141_790278                             5831 20 -      9835 AGTT--GCATAATT----TA--ACAA-A-T
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3528579 21 +   4113121 GGCT--GTGTAATG----TA--AT-TAATG
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             5742 21 +     55446 GGCT--GTGTAATG----TA--AT-TAATA
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 67441 20 +     78111 AGTT--GCATAATT----TA--ACAA-A-T
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                           10385 20 +     22701 AATT--GCATAATT----TA--ACAA-A-T
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5754351 20 +   9889416 agtt--gcataatt----ta--acaa-a-t
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                            10929 20 -    104377 AGTT--GCATAATT----TA--ACAA-A-T
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                              10958 20 +     23246 AGTT--GCATAATT----TA--ACAA-A-T
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     3591 14 +     11424 GGCA--GCAAAAGT----TA----------
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 I 3
s Arctocebus_calabarensis.k141_587554                        7530 20 +      9265 GGCT--GCATAATT----TA--ACAA-T-T
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9544241 20 +  39197703 AGTT--GCATAATT----TA--ACAA-A-T
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             65515 20 +     85812 AGTT--GCATAATT----TA--ACAA-A-T
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                16525 20 +     89302 AGTT--GCATAATT----TA--ACAA-A-T
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             21029 20 -     58268 AGTT--GCATAATT----TA--ACAA-A-T
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             69023 20 +    119057 AGTT--GCATAATT----TA--ACAA-A-T
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              10992 20 -     25888 AGTT--GCATAATT----TA--ACAA-A-T
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                12066 20 -     16375 GATT--GCATAATT----TA--ACAA-T-T
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               5682 20 +      6337 GATT--GCATAATT----TA--ACAA-T-T
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26385968 21 +  51448160 GACT--GCATAATG----TA--AC-AAATA
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                       11141 21 -     13118 GACT--GCATAATG----TA--AC-AAATA
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   50536 21 -     72089 GGCT--GTGTAATG----TA--AT-TAATG
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   305499 21 -   6870073 GGCT--GTGTAATG----TA--AT-TAATG
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22959605 21 + 161108492 GGCT--GTGTAATG----TA--AT-TAATG
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     421784 21 +    998990 GGCT--GTGTAATG----TA--AT-TAATG
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22668257 21 + 158972876 GGCT--GTGTAATG----TA--AT-TAATG
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               677095 21 +   1914593 GGCT--GTGTAATG----TA--AT-TAATG
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               118861 20 -    171031 AGTT--GCATAATT----TA--ACAA-A-T
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 17881 20 +    125063 AGTT--GCATAATT----TA--ACAA-A-T
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                19928 20 -    216513 AGTT--GCATAATT----TA--ACAA-A-T
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       12471 20 -    134917 AGTT--GCATAATT----TA--ACAA-A-T
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3225076 21 -   8989139 GGCT--GCATTATT----TA--AC-AAAGG
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           402776 21 -  15254737 GGCT--GCATTATT----TA--AC-AAAGG
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2978514 21 +   6889770 GGCT--GCATTATT----TA--AC-AAAGG
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11528228 20 +  39901454 GGTT--ACATAATT----TA--AC-AAA-T
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   23202 20 +     87036 GGTT--ACATAATT----TA--AC-AAA-T
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11275125 20 -  35597290 GGTT--ACataatt----ta--ac-aaa-t
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11097622 20 +  39895921 GGTT--ACataatt----ta--ac-aaa-t
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16464407 20 -  44759192 GGTT--ACataatt----ta--ac-aaa-t
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21336012 21 + 157394656 GGCT--GTGTAATG----TA--AT-TAATG
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135714365 21 - 157403528 GGCT--GTGTAATG----TA--AT-TAATG
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_1011243                   24 13 +      1208 TTATTATACCAAG-----------------
i Capromys_pilorides.CapPil_scaffold_1011243            C 0 I 27
s Castor_canadensis.CasCan_scaffold_1326                     1075 20 -    202837 GGCA--GCATAATT----TA--ACA-AA-C
i Castor_canadensis.CasCan_scaffold_1326                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   164815 21 -    276539 GGAT--GCATAATT----TA--AT-AAATG
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15790756 19 -  24422027 GTTT--GTCTGGTT----TA--ACA--G-T
i Cavia_aperea.AVPZ01000278.1                           C 0 I 59
s Cavia_porcellus.DS562889.1                             15802701 19 -  24440124 GTTT--GTCTGGTT----TA--ACA--G-T
i Cavia_porcellus.DS562889.1                            C 0 I 59
s Cavia_tschudii.CavTsc_scaffold_488                       180873 19 +    436027 GTTT--GTCTGGTT----TA--ACA--G-T
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 I 59
s Cebus_albifrons.Contig22                               18896596 20 -  29618158 AGCT--GCATAATT----TA--ACAA-A-T
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                13246 20 -     26817 AGCT--GCATAATT----TA--ACAA-A-T
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                17490 20 +     25043 AGCT--GCATAATT----TA--ACAA-A-T
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4370049 20 +   7569818 GGCT--GCATAATT----TA--AC-AAG-T
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_171732          206 20 +      8380 GGCT--GCATAATT----TA--AC-AAG-T
i Ceratotherium_simum_cottoni.CerCot_scaffold_171732    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6560489 20 +   6739814 AGTT--GCataatt----ta--acaa-a-t
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      31966 20 +     60454 AGTT--GCATAATT----TA--ACAA-A-T
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          7170 20 -     21101 AGTT--GCATAATT----TA--ACAA-A-T
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         64480 20 -    107033 AGTT--GCATAATT----TA--ACAA-A-T
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        7340 20 -     17608 AGTT--GCATAATT----TA--ACAA-A-T
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          4508 20 +     45019 AGTT--GCATAATT----TA--ACAA-A-T
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           4784 20 +     15177 AGTT--GCATAATT----TA--ACAA-A-T
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          7390 20 +     16677 AGTT--GCATAATT----TA--ACAA-A-T
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           29586 20 +     35983 AGTT--GCATAATT----TA--ACAA-A-T
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11996111 20 +  12117833 AGTT--GCATAATT----TA--ACAA-A-T
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46483093 20 +  46592721 AGTT--GCATAATT----TA--ACAA-A-T
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                       1204 20 -     27215 AGTT--GCATAATT----TA--ACAA-A-T
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       7404 20 +     35577 AGTT--GCATAATT----TA--ACAA-A-T
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        7198 20 -     25661 AGTT--GCATAATT----TA--ACAA-A-T
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        7370 20 -     17744 AGTT--GCATAATT----TA--ACAA-A-T
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        26739 20 +     37128 AGTT--GCATAATT----TA--ACAA-A-T
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           5766 20 -      6963 GGCT--GCATAATT----TA--ACAA-G-T
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           64282 20 -     68416 GGCT--GCATAATT----TA--ACAA-G-T
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_854352                             584 20 +     27737 GGCT--GCATAATT----TA--ACAA-G-T
i Cheirogaleus_medius.k141_854352                       C 0 C 0
s Cheracebus_lucifer.k141_619653                            10552 20 -     18223 AGTT--GCATAATT----TA--ACAA-A-T
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              2293 20 +    188999 AGTT--GCATAATT----TA--ACAA-A-T
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           46592 20 +     57117 AGTT--GCATAATT----TA--ACAA-A-T
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          51272 20 +     54541 AGTT--GCATAATT----TA--ACAA-A-T
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15965440 19 +  43084221 GTTT--GCCTAGTT----TC--ACA--A-T
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         76073 20 +    196370 AGTT--GCATAATT----TA--ACAA-A-T
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          20254 20 +     40510 AGTT--GCATAATT----TA--ACAA-A-T
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15144924 20 -  15256731 AGTT--GCATAATT----TA--ACAA-A-T
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      39388 20 -     53260 AGTT--GCATAATT----TA--ACAA-A-T
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101149947 20 + 101219884 AGTT--Gcataatt----ta--acaa-a-t
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                19789 20 -     21363 GGCT--GCATAATT----TA--ACAA-G-C
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           765093 20 +    964067 GGCT--GCAtaatt----ta--acaa-g-c
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_304221               370 18 -      7053 G-AT---CATAATT----TA--TATA-A-T
i Chrysochloris_asiatica.ChrAsi_scaffold_304221         C 0 C 0
s Colobus_angolensis.KN985967.1                          10889719 20 +  10971483 AGTT--Gcataatt----ta--acaa-a-t
i Colobus_angolensis.KN985967.1                         C 0 I 4
s Colobus_guereza.LG08                                  147667647 20 + 156195979 AGTT--GCATAATT----TA--ACAA-A-T
i Colobus_guereza.LG08                                  C 0 I 4
s Colobus_polykomos.k141_1406057                            19630 20 +     23629 AGTT--GCATAATT----TA--ACAA-A-T
i Colobus_polykomos.k141_1406057                        C 0 I 4
s Condylura_cristata.JH655880.1                          60624069 19 +  78930452 GACT--GCATAATT----TA--TC-A-A-A
i Condylura_cristata.JH655880.1                         C 0 I 10
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         4463 19 -      5782 CATT--GCATATTT----TA--AC-A-A-T
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 284056 20 -    399297 GGCA--GCATAATT----TA--ATA--AGT
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53036366  2 +  72327488 GC----------------------------
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              3950 18 -     22648 -ACT--GCATAATT----TA--AC-A-A-A
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 I 11
s Cryptoprocta_ferox.CryFer_flattened_line_19014            59445 20 -     70449 GGTT--ACATAATT----TG--AC-AAA-T
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  216190 19 -    956709 GTGT--GCATTATT----TA--ACA--G-T
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 36965 13 -     67205 TTTTTAAACTAGG-----------------
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 I 3
s Cuniculus_paca.CunPac_flattened_line_16637                21950 19 +     26546 GTTT--GCCTAGTT----TA--ACA--A-T
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 I 59
s Dasyprocta_punctata.DasPun_flattened_line_634             63094 19 -    236241 GTTT--GCCTAGTT----TA--ACA--G-T
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 I 59
s Dasypus_novemcinctus.JH568778.1                          186810 20 -   6883506 GGCT--GTATAATT----TA--ACAA-G-A
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16850228 20 +  31942871 GGCT--GCATAATT----TA--ACAA-T-T
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80042560 21 -  96802777 GACT--GCATAATG----TA--AC-AAATA
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 328448 20 +    993696 GGCT--GCATAATT----TA--AC-AAG-T
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   9082 20 +    151128 GGCT--GCATAATT----TA--AC-AAG-T
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   160915 19 +    228994 GTTT--GCCTACTT----TC--ACA--A-T
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3661364 19 +   4240102 AGTA--GAATAATT----TA--CCA--A-A
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  3738 19 -     11986 AGTA--GAATAATT----TA--CCA--T-A
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                41659 19 -     73477 GTTT--GCCTAGTT----TA--ACA--A-T
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 I 59
s Echinops_telfairi.JH980316.1                           23002575 12 -  44670279 A-CT---CATAATT----TA----------
i Echinops_telfairi.JH980316.1                          C 0 I 2
s Eidolon_helvum.KE772537.1                                 15173 19 +     24177 GATT--GCATAATT----TA--AC-A-A-c
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1498494 21 +   1727528 GGCT--GTGGAATG----TA--AT-TAATG
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7835530 17 +  15467074 A-GT---GATAATT----TA--AC-A-A-T
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        245052 20 -    369425 ACCA--GCATAATT----TA--ATA--ACT
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01076532.1                           1404 20 +      9159 ACCA--GCATAATT----TA--ATA--ACC
i Ellobius_talpinus.LOJH01076532.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85879372 20 +  99434291 GGTC--GCataact----ta--ac-aaa-t
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Equus_asinus.JREZ01000062.1                             5858311 20 -   7175178 GGCT--GCATAATT----TA--AC-AAG-T
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13356797 20 +  41866177 GGCT--GCATAATT----TA--AC-AAG-T
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          18287 20 +     92910 GGCT--GCATAATT----TA--AC-AAG-T
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11543460 20 +  16010500 GATT--GAAGAACT----TA--GT-A-AAT
i Erinaceus_europaeus.JH835290.1                        C 0 I 10
s Erythrocebus_patas.Contig8                             48781957 20 -  48907691 AGTT--GCATAATT----TA--ACAA-A-T
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          320811 21 +    330699 GACT--GCATAATG----TA--AC-AAATA
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             67267 21 +     89355 GACT--GCATAATG----TA--AC-AAATA
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                             10346 20 +     13586 GGCT--GAATAATT----TA--ACAA-T-T
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_1015201                              3605 20 -      4292 GGCT--GCATAATT----TA--ACAA-T-T
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            16742 20 +     36558 GGCT--GCATAATT----TA--ACAA-T-T
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            13064 20 +     60246 GGCT--GCATAATT----TA--ACAA-T-T
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                16549 20 +    109717 GGCT--GCATAATT----TA--ACAA-T-T
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 4532 20 -     19505 GGCT--GCATAATT----TA--ACAA-T-T
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                21207 20 +     27497 GGCT--GAATAATT----TA--ACAA-T-T
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           23663 20 +     26808 GGCT--GCATAATT----TA--ACAA-T-T
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                38395 20 +     46535 GGCT--GCATAATT----TA--ACAA-T-T
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              21136 20 -     29447 GGCT--GCATAATT----TA--ACAA-T-T
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129901082 20 - 159252932 GGTT--ACATAATT----TG--AC-AAA-A
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129288059 20 - 158578461 GGTT--ACATAATT----TG--AC-AAA-A
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 29249 20 +     52776 GGTT--ACATAATT----TG--AC-AAA-A
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13897386 19 -  19261668 GTTT--GCCTAGTT----TA--TCA--A-T
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     216385 24 -    847004 GGCT--GCATAATTAATTTA--ACAA-T-T
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           18747 24 -     43889 GGCT--GCATAATTAATTTA--ACAA-T-T
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          15888 24 +     27357 GGCT--GCATAATTAATTTA--ACAA-T-T
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               160670 19 +    324696 GACT--GCATAATT-----A--ACAA-A-T
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    188262 21 -    189561 GGCT--ATGTAATG----TA--AT-TAATG
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           17580 20 -     18683 AGCA--GCATAATT----TA--ACA-AA-T
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                              10360 20 -     14630 AGTT--GCATAATT----TA--ATAA-A-T
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119657460 20 - 195582420 AGTT--Gcataatt----ta--acaa-a-t
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   80898 20 +    118900 GGCA--GCATAATT----TA--ACA-AG-T
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         7136 20 +     10286 GGCT--GCATAATT----TA--ACAA-T-T
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             5617 20 -     11661 GGCT--GCATAATT----TA--ACAA-T-T
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                            10941 20 +     56096 GGCT--GCATAATT----TA--ACAA-T-T
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        34190 20 -     42470 GGCT--GCATAATT----TA--ACAA-T-T
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        50816 20 -     54384 GGCT--GCATAATT----TA--ACAA-T-T
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              24563 20 +     53719 GGTT--ATATAATT----TG--AC-AAA-T
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                35403 21 -     91191 GGCT--GTGTAATG----TA--AT-TAATG
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2561716 19 +  31725842 GTTT--TCCTAGTT----TA--ACA--A-T
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               64148 18 +     73687 GGCT---CATA-TT----TT--ACCA-A-T
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              152611 21 +    277961 GACT--GCATAATG----TA--AC-AAATA
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      285659 19 -    477199 GGCT--GCATAATT----ta--ac-a-a-t
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959               3344 19 +     26078 GGCT--GCATAATT----TA--AC-A-A-T
i Hipposideros_galeritus.HipGal_scaffold_52959          C 0 C 0
s Hoolock_leuconedys.ctg79                                     10285 20 -   7690867 AGTT--GCATAATT----TA--ACAA-A-T
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 24999 20 -     67322 GGTT--ACATAATT----TG--AC-AAA-T
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           22303 19 -    119109 GTTT--GCATATTT----TA--ACA--A-T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 I 59
s Hylobates_abbotti.k141_1816750                             2856 20 +      3202 AGTT--GCATAATT----TA--ACAG-A-T
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1136966                               865 20 +      9785 AGTT--GCATAATT----TA--ACAG-A-T
i Hylobates_agilis.k141_1136966                         C 0 C 0
s Hylobates_klossii.k141_468230                              4345 20 +      5464 AGTT--GCATAATT----TA--ACAG-A-T
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14629691 20 -  25970782 AGTT--GCATAATT----TA--ACAA-A-T
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            2243 20 +      4161 AGTT--GCATAATT----TA--ACAA-A-T
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                    10627 19 +     22540 TTCT--GCCCAATT----TA--ACA--A-T
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7131462 20 +  13083262 ggga--gaaaaatT----TA--ACA-GA-T
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   2678 20 +      3484 GACT--GCATAATT----TA--ACAA-T-T
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              14790 21 +     17520 GACT--GCATAATG----TA--AC-AAATA
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8580252 20 +  11848649 GTCA--GAATGATT----TA--ACA--AAT
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               29407 21 +     37189 GACT--GCATAATG----TA--AC-AAATA
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          55113 20 -    147782 AGTT--GCATAATT----TA--ACAA-A-T
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lemur_catta.scaffold_1                                258412494 20 - 285822530 GGCT--GCATAATT----TA--ACAA-T-T
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        29822 20 +     39228 GGCT--GCATAATT----TA--ACAA-T-T
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            59186 20 +     63517 GGCT--GCATAATT----TA--ACAA-T-T
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        37568 20 -     38897 GGCT--GCATAATT----TA--ACAA-T-T
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      3612 20 -     13103 GGCT--GCATAATT----TA--ACAA-T-T
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3093320 20 -   3498232 GATT--GCataact----ta--ac-aaa-t
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    22098 20 +     22452 AGCT--GCATAATT----TA--ACAA-A-T
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            141717 21 +   3060487 GACT--GCATAATG----TA--AC-AAATA
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19253578 20 +  19376315 AGTT--GCATAATT----TA--ACAA-A-T
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           16349 20 +     84689 GGCT--GCATAATT----TA--ACAA-T-T
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3784082 20 +   6799190 GGCT--GCATAATT----TA--ACAA-T-T
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20599887 19 -  62548349 GGTT---TATAATT----TG--GCCA-G-C
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11097078 20 +  39895028 GGTT--ACataatt----ta--ac-aaa-t
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             25327 20 +     74745 AGTC--GCATAATT----TA--ACAA-A-T
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12711790 20 +  12821369 AGTC--GCATAATT----TA--ACAA-A-T
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                4363 20 -     26467 AGTT--GCATAATT----TA--ACAA-A-T
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           52234 20 +     63263 AGTT--GCATAATT----TA--ACAA-A-T
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 4344 20 -     26361 AGTT--GCATAATT----TA--ACAA-A-T
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_2667654                                 647 20 -      5626 AGTT--GCATAATT----TA--ACAA-A-T
i Macaca_leonina.k141_2667654                           C 0 C 0
s Macaca_maura.k141_251854                                  50763 20 -     79256 AGTT--GCATAATT----TA--ACAA-A-T
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196040861 20 + 196197964 AGTT--GCataatt----ta--acaa-a-t
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11451031 20 +  11645122 AGTT--Gcataatt----ta--acaa-a-t
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   9717 20 -     46448 AGTT--GCATAATT----TA--ACAA-A-T
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                7378 20 -     13212 AGTT--GCATAATT----TA--ACAA-A-T
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 21060 20 -     55006 AGTT--GCATAATT----TA--ACAA-A-T
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43846482 20 +  43892939 AGTT--GCATAATT----TA--ACAA-A-T
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               22344 20 -     24607 AGTC--GCATAATT----TA--ACAA-A-T
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               9714 20 -     27140 AGTT--GCATAATT----TA--ACAA-A-T
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                703784 19 +    802869 GGTT--GCATAATG----TA--AC-A-A-T
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43442750 20 -  43563597 AGTT--GCATAATT----TA--ACAA-A-T
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4455549 20 -   4543643 AGTT--GCATAATT----TA--ACAA-A-T
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            154074 15 +    252755 GACT--GCA---TT----TC--AC-A-A--
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             41671 16 +     58827 GACT--GCa---tt----ta--ac-aaa--
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36879328 20 +  64221397 GGGA--GCAAAATT----TA--ACA-GA-T
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       67581 19 -    234502 GGCT--GCATCATT----TA--AC-C-A-T
i Megaderma_lyra.MegLyr_scaffold_3562                   I 1 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             8480  7 -     87323 -------------------A--AC-AAA-T
i Mellivora_capensis.MelCap_flattened_line_15433        I 8 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 3275 20 +    115071 GGCA--GCAGAATT----TA--ATA--AGC
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1052916 20 -  26018355 GCCA--ACATGATT----TA--ATA--GCT
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    4378 21 -     12939 GACT--GCATAATG----TA--AC-AAATG
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16515546 20 +  47401472 GGCT--ACATAATT----TA--ACAA-T-T
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  44201 12 -     48017 T-TT---CATAATT----TA----------
i Microgale_talazaci.MicTal_scaffold_34660              C 0 I 2
s Microtus_ochrogaster.CM001673.1                        22825888 20 -  98408828 ACCA--TCATAATT----TA--ATA--ACT
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         7296 20 +     29742 AGTT--GCATAATT----TA--ACAA-A-T
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        18816 20 -    104932 GATT--GCATAACT----TA--AC-AAA-T
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     6241 20 -     12809 GGCT--ACATAATT----TA--ACAA-T-T
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 152153 21 +    154973 GACT--GCATAATG----TA--AC-AAATA
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  8953 21 -     19904 GCCA--GTGTAATG----TA--AT-TAATG
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  152292 20 -    168139 GGTT--ATATAACT----TG--AC-AAG-T
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Mus_caroli.LT608236.1                                  70773155 20 +  92629107 GGCA--GCATGGTT----TG--ATA--AGT
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75495222 20 +  98207768 GGCA--GCATGGTT----TG--ATA--AGT
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67561953 20 +  89017189 GGCA--GCATGGTT----TA--ATA--AGT
i Mus_pahari.LT608305.1                                 C 0 I 5
s Mus_spretus.CM004110.1                                 74337930 20 +  97876770 GGCA--GCATGGTT----TG--ATA--AGT
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             15972  8 +     98495 GGGA--TCAT--------------------
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 I 4
s Mustela_putorius.JH417978.1                             4430570 20 -  28371801 GGTC--GCataact----ta--ac-aaa-t
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     96712 13 -    117718 TTATTAAACTACG-----------------
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 I 2
s Myrmecophaga_tridactyla.MyrTri_scaffold_12795               159 20 -     87886 GGCT--GCATAATT----TG--ACAA-G-T
i Myrmecophaga_tridactyla.MyrTri_scaffold_12795         C 0 C 0
s Nannospalax_galili.KL201303.1                            125633 20 +    362372 ACCA--GCATAATT----TA--ACA--AAT
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                              11557 20 +     48152 AGTT--GCATAATT----TA--ACAA-A-T
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4492207 20 -  14209539 GATT--GCataact----ta--ac-aaa-t
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3956744 21 -   4490290 GACT--GCGTAATG----TA--AC-AAATA
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Nomascus_annamensis.k141_851766                             137 20 -      2378 AGTT--GCATAATT----TA--ACAA-A-T
i Nomascus_annamensis.k141_851766                       n 20 n 20
s Nomascus_concolor.k141_256540                              7972 20 -      8966 AGTT--GCATAATT----TA--ACAA-A-T
i Nomascus_concolor.k141_256540                         C 0 C 0
s Nomascus_gabriellae.k141_1400361                           1913 20 -      2203 AGTT--GCATAATT----TA--ACAA-A-T
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_453                             7225 20 +     12787 AGTT--GCATAATT----TA--ACAA-A-T
i Nomascus_siki_b.tarseq_453                        C 0 C 0
s Nomascus_siki_a.k141_421408                                  1827 20 +     16235 AGTT--GCATAATT----TA--ACAA-A-T
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                39948 20 +   3668941 GGTT--Acataatt----ta--ac-aaa-t
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65573117 20 -  95554990 GGCT--GCATAATT----TA--ACAA-T-T
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_6040852                             754 20 +      1868 GGCT--GCATAATT----TA--ACAA-T-T
i Nycticebus_coucang.k141_6040852                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65681298 20 +  89412551 GGCT--GCATAATT----TA--ACAA-T-T
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            5001156 19 -  23139505 AGCT--G-GCAATT----TA--ATGA-A-T
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3692043 13 +  10294119 ttgtTAAACTAGG-----------------
i Octodon_degus.JH651621.1                              C 0 I 3
s Odocoileus_virginianus.KZ101650.1                       1085925 21 +   1425656 GGCT--GTGGAATG----TA--AT-TAATG
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         43982 21 +     78940 GGCT--GTGTAATG----TA--AT-TAATG
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  131694 20 +    145789 ACCA--GAGTAATT----TA--ATA--ACC
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  44628 20 +     62360 GCCA--GTATAATT----TA--ATA--ACT
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7230422 21 -   7562323 GACT--GCATAATG----TA--AC-AAATA
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              65264 18 -     66828 G-CT---CATAATT----TA--ACCA-A-T
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141885114 20 + 163896628 AGCT--gcataatt----ta--acaa-a-t
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      317085 20 -    505867 GGTT--Acataatt----ta--ac-aaa-t
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        6246 24 -     53940 GGCT--GCATAATTAATTTA--ACAA-T-T
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18014212 24 -  38779656 GGCT--GCATAATTAATTTA--ACAA-T-T
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134085185 21 - 275406953 GGCT--GTGTCATG----TA--AT-TAATG
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      86426 21 +    140051 GGCT--GTGTAATG----TA--AT-TAATG
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127579639 20 - 205426864 AGTT--Gcataatt----ta--acaa-a-t
i Pan_paniscus.CM003386.1                               C 0 I 24
s Pan_troglodytes.CM009241.2                            120156799 20 - 196562556 AGTT--Gcataatt----ta--acaa-a-t
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  41847 20 +    295523 GGTT--ACATAATT----TG--AC-AAA-A
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3645663 20 +  18214204 GGTT--ACATAATT----TG--AC-AAA-A
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5035300 20 -   6340057 ggtt--aaataatt----tg--ac-aAA-A
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1074058 23 -   1292953 GGCT--Gtgtaata----tatact-ttata
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188161539 20 - 188283584 AGTT--Gcataatt----ta--acaa-a-t
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              4629 20 +     25005 AGTT--GCATAATT----TA--ACAA-A-T
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47518911 20 +  47705337 AGTT--GCATAATT----TA--ACAA-A-T
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 72902 20 -    104429 AGTT--GCATAATT----TA--ACAA-A-T
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   11434 20 +     14967 AGTT--GCATAATT----TA--ACAA-A-T
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 7299 20 -      7628 AGTT--GCATAATT----TA--ACAA-A-T
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    123324 20 -    135482 AGTT--ACATAATT----TG--AT-GAA-T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          11912 20 -     23713 GGCT--GCATAATT----TA--ACAA-T-T
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           13063 20 +     61070 GGCT--GCATAATT----TA--ACAA-T-T
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       3357 19 +     49596 AGTA--GTATAATT----TA--CCA--A-A
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 I 1
s Peromyscus_maniculatus.KI615458.1                       2840441 20 -   3366660 GCCA--GCATAATT----TA--ATA--ACT
i Peromyscus_maniculatus.KI615458.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    18069 19 -     36578 GGTT--GCCTTGTC----CA--ACA--A-T
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              4885 21 +      8220 GACT--GCATAATG----TA--AC-AAATA
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Piliocolobus_badius.k141_1987485                           5097 20 -      5908 AGTT--GCATAATT----TA--ACAA-A-T
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       5716 20 -     17985 AGTT--GCATAATT----TA--ACAA-A-T
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            5083 20 +      7694 AGTT--GCATAATT----TA--ACAA-A-T
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26743566 20 +  26888534 AGTT--Gcataatt----ta--acaa-a-t
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990          11367 21 +     21690 GACT--GCATAATG----TA--AC-AAATA
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       27204 20 +     44506 AGTT--GCATAATT----TA--ACAA-A-T
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        27417 20 +     67491 AGTT--GCATAATT----TA--ACAA-A-T
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      17656 20 -     98129 AGTT--GCATAATT----TA--ACAA-A-T
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     27257 20 +    147771 AGTT--GCATAATT----TA--ACAA-A-T
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         3892 20 -     43940 AGTT--GCATAATT----TA--ACAA-A-T
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          7975 20 -     55515 AGTT--GCATAATT----TA--ACAA-A-T
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         27329 20 +    152463 AGTT--GCATAATT----TA--ACAA-A-T
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       5136 20 -    119457 AGTT--GCATAATT----TA--ACAA-A-T
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         17051 20 +    134592 AGTT--GCATAATT----TA--ACAA-A-T
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          27639 20 -     75465 AGTT--GCATAATT----TA--ACAA-A-T
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              192270 20 -    373494 AGTT--Gtataatt----ta--acaa-a-t
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19812918 20 +  19899266 AGTT--GCATAATT----TA--ACAA-A-T
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               8839 20 -     15069 AGTT--GCATAATT----TA--ACAA-A-T
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              8954 20 +     14865 AGTT--GCATAATT----TA--ACAA-A-T
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                5252 18 -      9567 GGCT---CATA-TT----TT--ACCA-A-T
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6853866 20 +  12164890 GGCT--GCATAATT----TA--ACAA-T-T
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     22674 20 -     30946 GACT--GCATAATT----TA--ACAA-T-T
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         8974 20 +     11805 GACT--GCATAATT----TA--ACAA-T-T
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           48308 20 +     52369 GACT--GCATAATT----TA--ACAA-T-T
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         40695 20 -     44753 GACT--GCATAATT----TA--ACAA-T-T
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            22618 20 +     27322 GACT--GCATAATT----TA--GCAA-T-T
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       22263 20 -     53241 GACT--GCATAATT----TA--ACAA-T-T
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         44526 20 -     48185 GACT--GCATAATT----TA--ACAA-T-T
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           40252 20 +     77221 GGCA--GCAGAATT----TA--ATA--AGC
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        252216 20 -    344369 GGTC--ACATAACT----TA--AC-AAA-T
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13248884 19 -  17261082 GGTT--Gcataatt----ta--ac-a-a-t
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             606834 19 -   3946241 GGTT--Gcataatt----ta--ac-a-a-t
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131541788 20 - 161321710 GGTT--ACATAATT----TG--AC-AAA-A
i Puma_concolor.QAVW01000427.1                          T 189 C 0
s Pygathrix_cinerea.k141_374971                             32945 20 +     56732 AGTT--GCATAATT----TA--ACAA-A-T
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6809442 20 +   6970761 AGTT--GCGTAATT----TG--ACAA-A-T
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             8831 20 +     18040 AGTT--GCGTAATT----TA--ACAA-A-T
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                22773 21 +     68503 GGCT--GTGTAATG----TA--AT-TAATG
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13920644 20 +  90463843 GGCA--GCATGTCT----TA--ATA--AGT
i Rattus_norvegicus.chr11                               I 1729 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1794711 19 +   2252614 GGTT--GCATAatt----ta--ac-a-a-t
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                            3210 20 -     17045 AGTT--GCATAATT----TA--ACAA-A-T
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206380697 20 - 206558726 AGTT--GCataatt----ta--acaa-a-t
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44859600 20 -  45163003 AGTT--GCATAATT----TA--ACAA-A-T
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                22229 19 +    109198 GGTT--GCATAATT----TA--AC-A-A-T
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                      3441 21 -      4338 GGCT--GTGTAATG----TA--AT-TAATG
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15677653 20 -  43202129 AGCT--Gcataatt----ta--acaa-a-t
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        9567 20 +     34089 AGCT--GCATAATT----TA--ACAA-A-T
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              9506 20 -     60842 AGCT--GCATAATT----TA--ACAA-A-T
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              9600 20 +     67014 AGCT--GCATAATT----TA--ACAA-A-T
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              9577 20 +     60816 AGCT--GCATAATT----TA--ACAA-A-T
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 9514 20 -     76454 AGCT--GCATAATT----TA--ACAA-A-T
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17346284 20 -  30362882 AGTT--GCATAATT----TA--ACAA-A-T
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         25605 20 -     62485 AGTT--GCATAATT----TA--ACAA-A-T
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   41497 19 -    114521 GTCT--GCATAATT----TA--TC-A-A-A
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 I 11
s Semnopithecus_entellus.k141_1572367                        6446 20 +     15331 AGTT--GCATAATT----TA--ACAA-A-T
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      11821 20 +     20762 AGTT--GCATAATT----TA--ACAA-A-T
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         121825 20 +    130994 AGTT--GCATAATT----TA--ACAA-A-T
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           40605 20 +     46263 AGTT--GCATAATT----TA--ACAA-A-T
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     33750 20 +     42640 AGTT--GCATAATT----TA--ACAA-A-T
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        16772 20 +     30600 AGTT--GCATAATT----TA--ACAA-A-T
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  106805 20 -    120886 GGCA--GCATAATT----TG--ATA--ACT
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            26157 19 +    739146 GGCT--GCATAATT----TA--AC-A-A-T
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 I 5
s Sorex_araneus.JH798170.1                               17776487 19 -  27805282 GGCT--Gcataatt----ta--ac-a-a-t
i Sorex_araneus.JH798170.1                              C 0 I 9
s Spermophilus_dauricus.KZ294190.1                        2245163 20 +   2842873 GGGA--GCAAAATT----TA--ACA-GA-T
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             240993 20 -    276980 GGCT--GGAAAACT----TA--AC-AAA-T
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            35193 20 +     62062 GGTT--ATATAATT----TG--AC-AAA-T
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189277189 21 + 218635234 GGCT--GCATAATT----TA--AC-AAATG
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        19950 20 -  13920577 AGTT--GCATAATT----TA--ACAA-A-T
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               18428 20 +     45698 GGCT--GCATAATT----TG--ACAA-G-T
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      812782 20 +   1148477 GACT--GCATAATT----TA--AC-AAG-T
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  63424 20 +     99546 GACT--GCATAATT----TA--AC-AAA-T
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194013072 20 - 194193292 AGTT--Gcataatt----ta--acaa-a-t
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                  1611 20 -      3104 GGCT--GCATAATT----TA--ACAA-G-T
i Tolypeutes_matacus.TolMat_scaffold_475685             C 0 C 0
s Trachypithecus_auratus.k141_738098                        30093 20 +     38948 AGTT--GCATAATT----TA--ACAA-A-T
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   23653 20 -     32910 AGTT--GCATAATT----TA--ACAA-A-T
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      5554 20 -     12939 AGTT--GCATAATT----TA--ACAA-A-T
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       4982 20 -     14244 AGTT--GCATAATT----TA--ACAA-A-T
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           46375 20 -     54611 AGTT--GCATAATT----TA--ACAA-A-T
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        4176 20 -     11566 AGTT--GCATAATT----TA--ACAA-A-T
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     6360 20 -     15592 AGTT--GCATAATT----TA--ACAA-A-T
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          5012 20 +     14371 AGTT--GCATAATT----TA--ACAA-A-T
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   3298 20 +     12481 AGTT--GCATAATT----TA--ACAA-A-T
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        3279 20 -     24393 AGTT--GCATAATT----TA--ACAA-A-T
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       8423 20 -     28054 AGTT--GCATAATT----TA--ACAA-A-T
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44663207 20 -  44834318 AGTT--GCATAATT----TA--ACAA-A-T
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       5519 20 +     13828 AGTT--GCATAATT----TA--ACAA-A-T
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                  10940 21 +     90398 CCCT--GCATAATG----TA--AT-AAATG
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16090961 19 +  31416278 GGCT---CATAATT----TG--ACCA-A-T
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2802207 20 -   3938065 GGCT--GCATAATT----TA--GCAA-A-T
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                   11035 20 +     13056 GGCT--GCATAATT----TA--GCAA-A-T
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69319152 21 -  96451834 GACT--GCATAATG----TA--AC-AGATA
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                    1888 18 +    136657 GACT--GTATAATT-----C--TC-A-A-A
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 I 11
s Ursus_maritimus.KK498671.1                              6522643 20 +  28682327 GGTT--GCataatt----ta--ac-aaa-t
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                 10539 20 -     20643 GGCT--GCATAATT----TA--ACAA-T-T
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             30074 20 -     33872 GGCT--GCATAATT----TA--ACAA-T-T
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1530184 21 -   2331223 GGCT--GCATAATT----TA--AC-AAAGG
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                146312 20 -    281493 GGTT--ACATAATT----TA--AC-AAA-T
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       132659 20 -    134049 GGCA--TCAAAATT----TA--ACA-AA-T
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_202118                     2274 20 -      3360 GCAA--CCATGATT----TA--ACC--AAT
i Zapus_hudsonius.ZapHud_scaffold_202118                C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            3744 21 -     13665 AAAT--GCATAATG----TA--AC-AAATA
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Eptesicus_fuscus.JH977687.1                             4710851  0 +   6522550 C
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Zalophus_californianus.ZalCal_flattened_line_4097        221654  0 -    227762 C
e Tonatia_saurophila.TonSau_scaffold_3334                  140002  0 -    259118 C
e Tadarida_brasiliensis.TadBra_scaffold_61492                4259  0 +     20549 C
e Pteronotus_parnellii.KE867983.1                            7995  0 -     27784 C
e Pipistrellus_pipistrellus.PipPip_scaffold_3306           101415  0 +    112873 C
e Odobenus_rosmarus.KB229369.1                             686793  0 -   3126709 C
e Noctilio_leporinus.NocLep_scaffold_12062                  52626 31 +     94413 I
e Myotis_myotis.MyoMyo_scaffold_6123                        15918  0 +     66751 C
e Myotis_lucifugus.GL429887.1                             3470691  0 -   3747815 C
e Myotis_davidii.KB114863.1                               5024262  0 +   6462685 C
e Myotis_brandtii.KE161952.1                               973184  0 +   8389877 C
e Murina_feae.MurFea_scaffold_2254                          26170  0 -    100666 C
e Mormoops_blainvillei.MorMeg_scaffold_2952                165343  0 +    265003 C
e Miniopterus_schreibersii.MinSch_scaffold_24116            39640  0 +     45743 C
e Miniopterus_natalensis.LDJU01000022.1                   8215181  0 +  10048721 C
e Micronycteris_hirsuta.MicHir_scaffold_37978               26828  0 -     32043 C
e Lasiurus_borealis.LasBor_scaffold_59542                    7402  0 +     26176 C
e Desmodus_rotundus.KZ672188.1                           18703091  0 -  18957592 C
e Carollia_perspicillata.CarPer_scaffold_4436               63873  0 +     67245 C
e Artibeus_jamaicensis.ArtJam_scaffold_41619                12877  0 -     29036 C
e Anoura_caudifer.AnoCau_scaffold_422                      394587  0 -    631301 C
e Hylobates_pileatus_a.tarseq_592                             37267 2881 -     60944 I
e Tarsius_wallacei.k141_48636                               64696  0 +     65473 C
e Tarsius_lariang.k141_609102                               31387  0 +     42269 C
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Cephalopachus_bancanus.k141_702587                        12545  0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530  0 +    345090 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               18683 24 +    209709 G--T-TT-A---TA-AAT-T--T--TCGTCCTT---------------------A---------------CTC
s Acinonyx_jubatus.LLWD01000356.1                         2041453 24 +   3721120 G--TTT--A---TG-AAT-T--C--CTTtccat---------------------a---------------cta
i Acinonyx_jubatus.LLWD01000356.1                       C 0 I 76
s Acomys_cahirinus.AcoCah_scaffold_1625                    119171 24 -    189883 G--A-GT-G---TG-AAT-T--T--CTGTCCCT---------------------A---------------CTT
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10665396 24 +  23371972 a--ttt--a---tg-aat-t--c--ttGTCCCT---------------------A---------------CCA
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7102345 24 -  16596857 g--ttt--a---tg-aAT-T--C--CTGTCCCT---------------------A---------------CTA
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_141108                   2524 24 -      7259 T--T-TT-A---TG-AAT-T--T--CTGTCCCT---------------------A---------------CTT
i Allactaga_bullata.AllBul_scaffold_141108              C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   6569 24 -     60446 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------CTC
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         7283 24 -     29318 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------CTC
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         6221 24 +     38766 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------CTC
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          7179 24 -     80423 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------CTC
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              2127 24 +     19852 G--T-TT-A---TA-ACT-T--T--TCATCCTT---------------------A---------------GTG
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                4347 24 -     12443 G--T-TT-A---TA-ACT-T--T--TCATCCTT---------------------A---------------GTG
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                             1670 24 +      5070 G--T-TT-A---TA-ACT-T--T--TCATCCTT---------------------A---------------GTG
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                 1417 24 -      1641 G--T-TT-A---TA-ACT-T--T--TCATCCTT---------------------A---------------GTG
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          4156 24 -     24210 G--T-TT-A---TA-ACT-T--T--TCATCCTT---------------------A---------------GTG
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_494922                              660 24 -      8325 G--T-TT-A---TA-ACT-T--T--TCATCCTT---------------------A---------------GTG
i Alouatta_nigerrima.k141_494922                        C 0 C 0
s Alouatta_palliata.k141_405616                              6574 24 +     16794 G--T-TT-A---TA-ACT-T--T--TCATCCTT---------------------A---------------GTG
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_347198                              603 24 +      9111 G--T-TT-A---TA-ACT-T--T--TCATCCTT---------------------A---------------GTG
i Alouatta_puruensis.k141_347198                        C 0 C 0
s Alouatta_seniculus.k141_790278                             5851 24 -      9835 G--T-TT-A---TA-ACT-T--T--TCATCCTT---------------------A---------------GTG
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3528600 19 +   4113121 G--C-T--A---TG-AAT-T--C--CTGTCACT----------------------------------------
i Ammotragus_lervia.NIVO01013474.1                      C 0 I 1
s Antilocapra_americana.AntAmePen_scaffold_27338             5763 23 +     55446 G--C-T--A---TG-AAT-T--c--ctgtcact---------------------a---------------ctg
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 67461 24 +     78111 G--T-TT-A---TA-ACT-T--T--TCATCCTT---------------------A---------------GTG
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                           10405 24 +     22701 G--T-TT-A---TA-ACT-T--T--TCATCCTT---------------------A---------------GTG
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5754371 24 +   9889416 g--t-tt-a---ta-acT-T--T--TCATCCTT---------------------A---------------GTG
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                            10949 24 -    104377 G--T-TT-A---TA-ACT-T--T--TCATCCTT---------------------A---------------GTG
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                              10978 24 +     23246 G--T-TT-A---TA-ACT-T--T--TCATCCTT---------------------A---------------GTG
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     3608 24 +     11424 T--T-TT-A---TG-AAT-T--C--CTGCCCTG---------------------A---------------CTA
i Aplodontia_rufa.AprRuf_scaffold_101456                I 3 C 0
s Arctocebus_calabarensis.k141_587554                        7550 24 +      9265 G--T-TC-A---TG-AAT-T--T--CTGTCCTT---------------------A---------------CTG
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9544261 24 +  39197703 G--T-TT-A---TA-ACT-T--T--TCATCCTT---------------------A---------------GTG
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             65535 24 +     85812 G--T-TT-A---TA-ACT-T--T--TCATCCTT---------------------A---------------GTG
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                16545 24 +     89302 G--T-TT-A---TA-ACT-T--T--TCATCCTT---------------------A---------------GTG
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             21049 24 -     58268 G--T-TT-A---TA-ACT-T--T--TCATCCTT---------------------A---------------GTG
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             69043 24 +    119057 G--T-TT-A---TA-ACT-T--T--TCATCCTT---------------------A---------------GTG
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              11012 24 -     25888 G--T-TT-A---TA-ACT-T--T--TCATCCTT---------------------A---------------GTG
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                12086 24 -     16375 G--T-TT-A---TG-AAT-T--T--CTGTCCTT---------------------A---------------CTG
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               5702 24 +      6337 G--T-TT-A---TG-AAT-T--T--CTGTCCTT---------------------A---------------CTG
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26385989 23 +  51448160 G--T-T--A---TG-AAT-T--C--CTGTCGCT---------------------A---------------CTG
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                       11162 23 -     13118 G--T-T--A---TG-AAT-T--C--CTGTCGCT---------------------A---------------CTG
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   50557 44 -     72089 G--C-T--A---TG-AAT-T--C--CTGTCACTACTGTTAAAGTGTGTGTGTGTG---------------TAT
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   305520 23 -   6870073 G--C-T--C---TG-AAT-T--C--CTGTCACT---------------------A---------------CTG
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22959626 23 + 161108492 G--C-T--A---TG-AAT-T--C--CTGTCACT---------------------A---------------CTG
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     421805 23 +    998990 G--C-T--A---TG-AAT-T--C--CTGTCACT---------------------A---------------CTG
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22668278 23 + 158972876 G--C-T--A---TG-AAT-T--C--CTGTCACT---------------------A---------------CTG
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               677116 23 +   1914593 G--C-T--A---TG-AAT-T--C--CTGTCACT---------------------A---------------CTG
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               118881 24 -    171031 G--T-TT-A---TA-ACT-T--T--TCATCCTT---------------------A---------------GTA
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 17901 24 +    125063 G--T-TT-A---TA-ACT-T--T--TCATCCTT---------------------A---------------GTA
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                19948 24 -    216513 G--T-TT-A---TA-ACT-T--T--TCATCCTT---------------------A---------------GTA
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       12491 24 -    134917 G--T-TT-A---TA-ACT-T--T--TCATCCTT---------------------A---------------GTA
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3225097 23 -   8989139 G--T-T--A---TG-AAT-T--C--CTGTCCCT---------------------A---------------CTA
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           402797 23 -  15254737 G--T-T--A---TG-AAT-T--C--CTGTCCCT---------------------A---------------CTA
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2978535 23 +   6889770 G--T-T--A---TG-AAT-T--C--CTGTCCCT---------------------A---------------CTA
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11528248 24 +  39901454 G--TTT--A---TG-AAT-T--A--CTGTCCCT---------------------A---------------CTG
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   23222 24 +     87036 G--TTT--A---TG-AAT-T--A--CTGTCCCT---------------------A---------------CTG
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11275145 24 -  35597290 g--ttt--a---tg-aaT-T--A--CTGTCCCT---------------------A---------------CGG
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11097642 24 +  39895921 g--ttt--a---tg-aaT-T--A--CTGTCCCT---------------------A---------------CTG
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16464427 24 -  44759192 g--ttt--a---tg-aaT-T--A--CTGTCCCT---------------------A---------------CTG
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21336033 19 + 157394656 G--C-T--A---TG-AAT-T--C--CTGTCACT----------------------------------------
i Capra_aegagrus.CM003214.1                             C 0 I 1
s Capra_hircus.CM004562.1                               135714386 19 - 157403528 G--C-T--A---TG-AAT-T--C--CTGTCACT----------------------------------------
i Capra_hircus.CM004562.1                               C 0 I 1
s Capromys_pilorides.CapPil_scaffold_780116                   623 24 +      1571 A--G-TT-G---TG-AAT-T--T--CTGTCCTT---------------------A---------------Cta
i Capromys_pilorides.CapPil_scaffold_780116             I 51 n 27
s Castor_canadensis.CasCan_scaffold_1326                     1095 24 -    202837 A--C-TT-A---TG-AAT-T--T--CTGTCCTT---------------------A---------------CTG
i Castor_canadensis.CasCan_scaffold_1326                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   164836 23 -    276539 G--T-T--A---TG-AAT-T--C--CTGTCCCT---------------------A---------------CTG
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15790834 24 -  24422027 G--T-TT-G---TG-AAT-T--T--TTATCTTA---------------------A---------------CTA
i Cavia_aperea.AVPZ01000278.1                           I 59 C 0
s Cavia_porcellus.DS562889.1                             15802779 24 -  24440124 G--T-TT-G---TG-AAT-T--T--TTATCTTA---------------------A---------------CTA
i Cavia_porcellus.DS562889.1                            I 59 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       180951 24 +    436027 G--T-TT-G---TG-AAT-T--T--TTATCTTA---------------------A---------------CTA
i Cavia_tschudii.CavTsc_scaffold_488                    I 59 C 0
s Cebus_albifrons.Contig22                               18896616 24 -  29618158 G--T-TG-A---TA-GCT-T--T--TCATCCTT---------------------A---------------GTG
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                13266 24 -     26817 G--T-TG-A---TA-GCT-T--T--TCATCCTT---------------------A---------------GTG
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                17510 24 +     25043 G--T-TG-A---TA-GCT-T--T--TCATCCTT---------------------A---------------GTG
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4370069 24 +   7569818 G--TTT--A---TG-AAT-T--C--CTGTCCCT---------------------A---------------CTG
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_171732          226 24 +      8380 G--TTT--A---TG-AAT-T--C--CTGTCCCT---------------------A---------------CTG
i Ceratotherium_simum_cottoni.CerCot_scaffold_171732    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6560509 24 +   6739814 g--t-tt-a---ta-aat-t--t--tcaTCCTT---------------------A---------------CTC
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      31986 24 +     60454 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------CTC
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          7190 24 -     21101 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------CTC
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         64500 24 -    107033 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------CTC
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        7360 24 -     17608 G--T-TT-A---TA-AAT-T--T--TCCTCCTT---------------------A---------------CTC
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          4528 24 +     45019 G--T-TT-A---TA-AAT-T--T--TCCTCCTT---------------------A---------------CTC
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           4804 24 +     15177 G--T-TT-A---TA-AAT-T--T--TCCTCCTT---------------------A---------------CTC
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          7410 24 +     16677 G--T-TT-A---CA-AAT-T--T--TCCTCCTT---------------------A---------------CTC
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           29606 24 +     35983 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------CTC
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11996131 24 +  12117833 G--T-TT-A---TA-AAT-T--T--TCCTCCTT---------------------A---------------CTC
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46483113 24 +  46592721 G--T-TT-A---TA-AAT-T--T--TCCTCCTT---------------------A---------------CTC
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                       1224 24 -     27215 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------CTC
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       7424 24 +     35577 G--T-TT-A---TA-AAT-T--T--TCCTCCTT---------------------A---------------CTC
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        7218 24 -     25661 G--T-TT-A---TA-AAT-T--T--TCCTCCTT---------------------A---------------CTC
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        7390 24 -     17744 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------CTC
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        26759 24 +     37128 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------CTC
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           5786 22 -      6963 G--T-TT-A---TG-AAT-T--T--CTCTTCAT---------------------A---------------T--
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           64302 24 -     68416 G--T-TT-G---TG-AAT-T--T--CTGTCCTT---------------------A---------------CTG
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_854352                             604 24 +     27737 G--T-TT-A---TG-AAT-T--T--CTGTCCTT---------------------A---------------CTG
i Cheirogaleus_medius.k141_854352                       C 0 C 0
s Cheracebus_lucifer.k141_619653                            10572 24 -     18223 G--T-TT-A---TA-ACT-T--T--TCATCCTT---------------------A---------------GTA
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              2313 24 +    188999 G--T-TT-A---TA-ACT-T--T--TCATCCTT---------------------A---------------GTA
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           46612 24 +     57117 G--T-TT-A---TA-ACT-T--T--TCATCCTT---------------------A---------------GTA
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          51292 24 +     54541 G--T-TT-A---TA-ACT-T--T--TCATCCTT---------------------A---------------GTA
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15965459 24 +  43084221 G--T-TT-G---TG-AAT-T--T--CTGTCCTT---------------------a---------------cta
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         76093 24 +    196370 G--T-TT-A---TA-ACT-T--T--TCATCCTT---------------------A---------------GTA
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          20274 24 +     40510 G--T-TT-A---TA-ACT-T--T--TCATCCTT---------------------A---------------GTA
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15144944 24 -  15256731 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------CTC
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      39408 24 -     53260 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------CTC
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101149967 24 + 101219884 g--t-tt-a---ta-aat-t--t--tcatCCTT---------------------A---------------CTC
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                19809 24 -     21363 A--T-TT-A---TG-AAT-T--T--CTGTTCCT---------------------A---------------CTG
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           765113 24 +    964067 a--t-tt-a---tg-AAT-T--T--CTTTTCCT---------------------A---------------CTG
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_304221               388 23 -      7053 A--T-AT-A---TG-A-T-A--T--CTCTTTCT---------------------G---------------CTT
i Chrysochloris_asiatica.ChrAsi_scaffold_304221         C 0 C 0
s Colobus_angolensis.KN985967.1                          10889743 19 +  10971483 ------------ta-aat-t--t--tcatcctt---------------------A---------------CTC
i Colobus_angolensis.KN985967.1                         I 4 C 0
s Colobus_guereza.LG08                                  147667671 19 + 156195979 ------------TA-AAT-T--T--TCATCCTT---------------------A---------------CTC
i Colobus_guereza.LG08                                  I 4 C 0
s Colobus_polykomos.k141_1406057                            19654 19 +     23629 ------------TA-AAT-T--T--TCATCCTT---------------------A---------------CTC
i Colobus_polykomos.k141_1406057                        I 4 C 0
s Condylura_cristata.JH655880.1                          60624098 12 +  78930452 -------------------------CTGTTCCC---------------------A---------------CTG
i Condylura_cristata.JH655880.1                         I 10 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         4482 24 -      5782 T--T-A--T---TAAAAT-T--C--CTGTCCCT---------------------A---------------CTG
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 284076 24 -    399297 G--A-TT-C---TA-AAT-T--T--CTGTCCAT---------------------A---------------CTT
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53036368 18 +  72327488 -------------A-AAT-T--T--CTGTCCCT---------------------A---------------CTT
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              3979 14 -     22648 -------------------T--C--CCATCCCT---------------------G---------------CTG
i Crocidura_indochinensis.CroInd_scaffold_27484         I 11 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            59465 24 -     70449 G--TTT--A---TG-AAT-T--C--TTGTCCCT---------------------A---------------CTA
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  216209 24 -    956709 A--T-TT-A---TG-GAT-T--T--CCATAATT---------------------A---------------CTG
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 36981 21 -     67205 A--A-CT-G---TG-AAt-t--t--ctgtcctt---------------------a------------------
i Ctenomys_sociabilis.CteSoc_scaffold_19489             I 3 I 206
s Cuniculus_paca.CunPac_flattened_line_16637                22028 24 +     26546 G--T-TG-G---TG-AAT-T--T--CTGTCCTT---------------------A---------------CTA
i Cuniculus_paca.CunPac_flattened_line_16637            I 59 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             63172 24 -    236241 G--T-TT-G---TG-AAT-T--T--CTGTCCTT---------------------A---------------CTA
i Dasyprocta_punctata.DasPun_flattened_line_634         I 59 C 0
s Dasypus_novemcinctus.JH568778.1                          186830 24 -   6883506 G--C-TT-A---TG-AAT-T--T--CTCTCCCT---------------------A---------------CTG
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16850248 24 +  31942871 T--T-TT-A---TA-TAT-T--T--CTGTCCTT---------------------A---------------CTG
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80042581 23 -  96802777 G--T-T--A---TG-AAT-T--C--CTGTTGCT---------------------A---------------ctg
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 328468 24 +    993696 G--TTT--A---TG-AAT-T--C--CTGTCCCT---------------------A---------------CTG
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   9102 24 +    151128 G--TTT--A---TG-AAT-T--C--CTGTCCCT---------------------A---------------CTG
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   160934 24 +    228994 G--T-CT-G---TG-ATT-T--T--CTGTCCTT---------------------A---------------CTA
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3661383 24 +   4240102 A--T-GT-A---TG-GATTT--T--CTATCCCT---------------------A---------------T-G
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  3757 24 -     11986 A--T-GT-A---TG-GATTT--T--CTATCCCT---------------------A---------------T-G
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                41737 24 -     73477 G--T-TT-G---TG-AAT-T--T--CTGTCCCT---------------------A---------------CTA
i Dolichotis_patagonum.DolPat_scaffold_14102            I 59 C 0
s Echinops_telfairi.JH980316.1                           23002589 24 -  44670279 G--T-CA-A---TG-ACT-A--T--CTGCCTTA---------------------A---------------CTA
i Echinops_telfairi.JH980316.1                          I 2 C 0
s Eidolon_helvum.KE772537.1                                 15192 24 +     24177 t--t-a--t---taaaat-t--c--cttttccT---------------------A---------------CTG
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1498515 23 +   1727528 G--C-T--A---TG-AAT-T--C--CTGTCACC---------------------A---------------CTG
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7835547 24 +  15467074 T--T-TA-A---TG-TAT-A--T--TTATCTTT---------------------C---------------CTA
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        245072 24 -    369425 G--A-TT-G---AG-AAT-T--T--ATGTCCCT---------------------A---------------CTT
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01076532.1                           1424 24 +      9159 G--A-TT-G---AG-AAT-T--T--CTGTCCCT---------------------A---------------CCT
i Ellobius_talpinus.LOJH01076532.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85879392 24 +  99434291 a--ttt--a---tg-aat-t--c--cTGTCCCA---------------------A---------------CTG
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Equus_asinus.JREZ01000062.1                             5858331 24 -   7175178 G--TTT--A---TG-AAT-T--C--CTGTCCCC---------------------A---------------CTG
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13356817 24 +  41866177 G--TTT--A---TG-AAT-T--C--CTGTCCCC---------------------A---------------CTG
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          18307 24 +     92910 G--TTT--A---TG-AAT-T--C--CTGTCCCC---------------------A---------------CTG
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11543490 14 +  16010500 -------------------T--A--CTGGCCCT---------------------G---------------GAg
i Erinaceus_europaeus.JH835290.1                        I 10 C 0
s Erythrocebus_patas.Contig8                             48781977 24 -  48907691 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------CTC
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          320832 23 +    330699 G--T-T--A---TG-AAT-T--C--CTGTCGCT---------------------A---------------CTG
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             67288 23 +     89355 G--T-T--A---TG-AAT-T--C--CTGTCGCT---------------------A---------------CTG
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                             10366 24 +     13586 G--T-TT-A---TG-AAT-T--T--CTGTCCTT---------------------A---------------CTG
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_1015201                              3625 24 -      4292 G--T-TT-A---TG-AAT-T--T--CTGTCCTT---------------------A---------------CTG
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            16762 24 +     36558 G--T-TT-A---TG-AAT-T--T--CTGTCCTT---------------------A---------------CTG
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            13084 24 +     60246 G--T-TT-A---TG-AAT-T--T--CTGTCCTT---------------------A---------------CTG
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                16569 24 +    109717 G--T-TT-A---TG-AAT-T--T--CTGTCCTT---------------------A---------------CTG
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 4552 24 -     19505 G--T-TT-A---TG-AAT-T--T--CTGTCCTT---------------------A---------------CTG
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                21227 24 +     27497 G--T-TT-A---TG-AAT-T--T--CTGTCCTT---------------------A---------------CTG
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           23683 24 +     26808 G--T-TT-A---TG-AAT-T--T--CTGTCCTT---------------------A---------------CTG
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                38415 24 +     46535 G--T-TT-A---TG-AAT-T--T--CTGTCCTT---------------------A---------------CTG
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              21156 24 -     29447 G--T-TT-A---TG-AAT-T--T--CTGTCCTT---------------------A---------------CTG
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129901102 22 - 159252932 G--TTT--A---TG-AAT-T--C--CTTTCCCT---------------------a---------------c--
i Felis_catus.CM001386.2                                C 0 I 2
s Felis_catus_fca126.CM031420.1                         129288079 22 - 158578461 G--TTT--A---TG-AAT-T--C--CTTTCCCT---------------------a---------------c--
i Felis_catus_fca126.CM031420.1                         C 0 I 2
s Felis_nigripes.FelNig_flattened_line_8080                 29269 22 +     52776 G--TTT--A---TG-AAT-T--C--CTTTCCCT---------------------A---------------C--
i Felis_nigripes.FelNig_flattened_line_8080             C 0 I 2
s Fukomys_damarensis.KN123630.1                          13897405 24 -  19261668 G--T-TT-G---TG-AAT-C--T--CTCTCCTT---------------------A---------------CCA
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     216409 24 -    847004 G--T-TT-A---TG-AAT-T--C--CTGTCCTT---------------------A---------------CTC
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           18771 24 -     43889 G--T-TC-A---TG-AAT-T--C--CTGTCCTT---------------------A---------------CTC
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          15912 24 +     27357 G--T-TG-A---TG-AAT-T--T--CTGTCCTT---------------------A---------------CTC
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               160689 24 +    324696 G--T-TT-A---TG-AAT-T--T--CTCTCCTT---------------------T---------------CTG
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    188283 23 -    189561 G--C-T--A---TG-AAT-T--C--CTGTCACT---------------------A---------------CTG
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           17600 24 -     18683 G--C-TT-A---TG-AAT-T--T--CTGTCCTC---------------------A---------------CTA
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                              10380 24 -     14630 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------CTC
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119657480 24 - 195582420 g--t-tt-a---ta-aat-t--t--tcatCCTT---------------------A---------------CTC
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   80918 24 +    118900 G--C-TT-A---TG-AAT-T--T--CCATCCTC---------------------A---------------CTA
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         7156 24 +     10286 G--T-TT-A---TG-AAT-T--T--CTGTCCTT---------------------A---------------CTG
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             5637 24 -     11661 G--T-TT-A---TG-AAT-T--T--CTGTCCTT---------------------A---------------CTG
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                            10961 24 +     56096 G--T-TT-A---TG-AAT-T--T--CTGTCCTT---------------------A---------------CTG
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        34210 24 -     42470 G--T-TT-A---TG-AAT-T--T--CTGTCCTT---------------------A---------------CTG
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        50836 24 -     54384 G--T-TT-A---TG-AAT-T--T--CTGTCCTT---------------------A---------------CTG
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              24583 24 +     53719 G--TTT--A---TG-AAT-T--C--CTGTCCTT---------------------A---------------CTA
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                35424 10 -     91191 G--C-T--A---TG-AAT-T-----------------------------------------------------
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 I 5
s Heterocephalus_glaber.JH602058.1                        2561735 24 +  31725842 G--T-TT-G---TG-AAT-T--T--ATAGCCTT---------------------A---------------CCA
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               64166 24 +     73687 G--G-TT-G---TG-AAT-A--T--CTTCCCCT---------------------G---------------ATA
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              152632 23 +    277961 G--T-T--A---TG-AAT-T--C--CTGTTGCT---------------------A---------------CTG
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      285678 24 -    477199 t--t-a--t---taaaat-t--c--ctGTCCCT---------------------A---------------Ctg
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959               3363 24 +     26078 T--T-A--T---TAAAAT-T--C--CTGTCCCT---------------------A---------------Ctg
i Hipposideros_galeritus.HipGal_scaffold_52959          C 0 C 0
s Hoolock_leuconedys.ctg79                                     10305 24 -   7690867 G--T-TT-A---TA-AAT-T--T--TTATCCTC---------------------A---------------CCC
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 25019 24 -     67322 G--TTT--A---TG-AAT-T--C--CTGTCCCT---------------------A---------------CTA
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           22381 24 -    119109 G--T-TT-G---TG-GAT-T--T--CTGTCCTT---------------------A---------------CTA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       I 59 C 0
s Hylobates_abbotti.k141_1816750                             2876 24 +      3202 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------CCC
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1136966                               885 24 +      9785 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------CCC
i Hylobates_agilis.k141_1136966                         C 0 C 0
s Hylobates_klossii.k141_468230                              4365 24 +      5464 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------CCC
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14629711 24 -  25970782 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------CCC
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            2263 24 +      4161 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------CCC
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                    10646 24 +     22540 G--G-TT-G---AG-AAA-G--T--CGGTCCTT---------------------A---------------ATA
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7131482 24 +  13083262 G--T-TT-A---TG-ACT-T--T--CTGTCCTC---------------------A---------------CCG
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   2698 24 +      3484 G--T-TT-A---TG-AAT-T--T--CTGTCCTT---------------------A---------------CTG
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              14811 23 +     17520 G--T-T--A---TG-AAT-T--C--CTGTTGCT---------------------A---------------CTG
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8580272 24 +  11848649 T--T-TT-G---TG-AAT-T--T--CTGTCCCT---------------------A---------------CTT
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               29428 23 +     37189 G--T-T--A---TG-AAT-T--C--CTATCACT---------------------C---------------CTG
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          55133 24 -    147782 G--T-TT-A---TA-ACT-T--T--TCATCCTT---------------------A---------------GTG
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lemur_catta.scaffold_1                                258412514 24 - 285822530 G--T-TT-A---TG-AAT-T--T--CTGTCCTT---------------------A---------------CTG
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        29842 24 +     39228 G--T-TT-A---TG-AAT-T--T--CTGTCCTT---------------------A---------------CTG
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            59206 24 +     63517 G--T-TT-A---TG-AAT-T--T--CTGTCCTT---------------------A---------------CTG
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        37588 24 -     38897 A--T-TT-A---TG-AAT-T--T--CTGTCCTT---------------------A---------------CTG
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      3632 24 -     13103 G--T-TT-A---TG-AAT-T--T--CTGTCCTT---------------------A---------------CTG
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3093340 24 -   3498232 a--ttt--a---tg-aat-t--c--cTGTCCCT---------------------A---------------CTG
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    22118 24 +     22452 A--T-TC-A---TG-AAT-T--C--AAGTCCTT---------------------A---------------CTA
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            141738 23 +   3060487 G--T-T--A---TG-AAT-T--C--CTGTTGCT---------------------A---------------CTG
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19253598 24 +  19376315 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------CTC
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           16369 26 +     84689 G--T-TT-A---CA-AAT-T--TGTCCTTCCTT---------------------A---------------CTA
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3784102 26 +   6799190 G--T-TT-A---CA-AAT-T--TGTCCTTCCTT---------------------A---------------CTA
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20599906 24 -  62548349 G--T-TT-A---TG-AAT-A--T--CTGCCCCT---------------------A---------------TTA
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11097098 24 +  39895028 g--ttt--a---tg-aaT-T--A--CTGTCCCT---------------------A---------------CTG
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             25347 24 +     74745 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------CTC
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12711810 24 +  12821369 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------CTC
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                4383 24 -     26467 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------CTC
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           52254 24 +     63263 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------CTC
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 4364 24 -     26361 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------CTC
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_2667654                                 667 24 -      5626 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------CTC
i Macaca_leonina.k141_2667654                           C 0 C 0
s Macaca_maura.k141_251854                                  50783 24 -     79256 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------CTC
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196040881 24 + 196197964 g--t-tt-a---ta-aat-t--t--tcaTCCTT---------------------A---------------CTC
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11451051 24 +  11645122 g--t-tt-a---ta-aat-t--t--tcatCCTT---------------------A---------------CTC
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   9737 24 -     46448 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------CTC
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                7398 24 -     13212 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------CTC
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 21080 24 -     55006 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------CTC
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43846502 24 +  43892939 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------CTC
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               22364 24 -     24607 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------CTC
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               9734 24 -     27140 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------CTC
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                703803 24 +    802869 T--T-A--T---TAAAAT-T--C--CTTTTCCT---------------------A---------------CTG
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43442770 21 -  43563597 G--T-TT-A---CA-AAT-T--T-----TCCTT---------------------A---------------CTC
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4455569 21 -   4543643 G--T-TT-A---TA-AAT-T--T-----TCCTT---------------------A---------------CTC
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            154089 23 +    252755 T--A-C--A---TG-AAT-T--C--TTGTCCCT---------------------A---------------CTG
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             41687 23 +     58827 t--a-c--a---tg-aat-T--C--CTGTCCCT---------------------A---------------CTG
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36879348 24 +  64221397 G--T-TT-A---TG-ACT-T--T--CTGTCCTC---------------------A---------------CTG
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       67600 24 -    234502 T--T-A--T---TAAAAT-T--C--TGATCCCT---------------------G---------------CTG
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             8487 24 -     87323 A--TTT--A---TG-AAT-T--C--CTGCCCCA---------------------A---------------CTA
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 3295 26 +    115071 A--A-TT-G---TG-AAT-TTTT--TTGCTCCT---------------------G---------------CTT
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1052936 24 -  26018355 G--A-TT-A---CA-AAT-T--T--CTGTCCCT---------------------T---------------CTT
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    4399 23 -     12939 G--T-T--A---TG-AAT-T--C--CTGTTGCT---------------------A---------------CTG
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16515566 24 +  47401472 G--T-TT-A---TG-AAT-T--T--CTGTCCTT---------------------A---------------CTG
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  44215 24 -     48017 A--T-TT-A---TG-AAT-A--C--CTGCCTTC---------------------T---------------CTA
i Microgale_talazaci.MicTal_scaffold_34660              I 2 C 0
s Microtus_ochrogaster.CM001673.1                        22825908 24 -  98408828 G--A-TT-G---AG-AAT-T--T--CTGTCCCT---------------------A---------------CTT
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         7316 24 +     29742 G--T-TT-A---TA-AAT-T--T--TCATTCTC---------------------A---------------CTC
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        18836 24 -    104932 A--TTT--A---TG-AAT-T--C--CTGTCCCT---------------------A---------------CTG
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     6261 24 -     12809 G--T-TT-A---TG-AAT-T--T--CTGTCCTT---------------------A---------------CTG
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 152174 23 +    154973 G--T-T--A---TG-AAT-T--C--CTGTTGCT---------------------A---------------CTG
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  8974 23 -     19904 G--C-T--A---TG-AAT-T--C--CTATCACT---------------------A---------------TTG
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  152312 24 -    168139 G--TTT--A---TG-AAT-T--C--CTGCCCTT---------------------T---------------CTA
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Mus_caroli.LT608236.1                                  70773175 27 +  92629107 G--A-TT-GTGGTG-AGT-T--T--CTGTCCCT---------------------A---------------CTC
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75495242 24 +  98207768 G--A-TT-G---TG-AGT-T--T--CTGTCCCT---------------------A---------------CTT
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67561978 15 +  89017189 -----------------T-T--T--CTGTCCCT---------------------A---------------CTT
i Mus_pahari.LT608305.1                                 I 5 C 0
s Mus_spretus.CM004110.1                                 74337950 24 +  97876770 G--A-TT-G---TG-AGT-T--T--CTGTCCCT---------------------A---------------CTT
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             15984 25 +     98495 G--C-TT-A---TG-GATCT--T--TTTTCCTC---------------------C---------------CTA
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 4 C 0
s Mustela_putorius.JH417978.1                             4430590 24 -  28371801 a--ttt--a---tg-aat-t--c--cTGTCCCA---------------------A---------------CTG
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     96727 24 -    117718 A--A-CT-G---TG-AAC-T--T--CTATCCGT---------------------C---------------CTA
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 2 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_12795               179 24 -     87886 A--T-TT-A---CG-AAC-t--t--ctgttcct---------------------a---------------cgg
i Myrmecophaga_tridactyla.MyrTri_scaffold_12795         C 0 C 0
s Nannospalax_galili.KL201303.1                            125653 24 +    362372 G--A-TT-A---TG-TAT-T--T--CTGTCCCT---------------------A---------------CTT
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                              11577 24 +     48152 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------CTC
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4492227 24 -  14209539 a--ttt--a---tg-aat-t--c--cTGTCCCT---------------------A---------------CTG
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3956765 23 -   4490290 G--T-T--A---TG-AAT-T--C--CTGTTGCT---------------------A---------------ctg
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Nomascus_annamensis.k141_762468                            1382 24 -      2755 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------CCC
i Nomascus_annamensis.k141_762468                       I 20 C 0
s Nomascus_concolor.k141_256540                              7992 24 -      8966 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------CCC
i Nomascus_concolor.k141_256540                         C 0 C 0
s Nomascus_gabriellae.k141_1400361                           1933 24 -      2203 G--T-TT-A---TA-AAT-T--T--TCATCCTC---------------------A---------------CCC
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_453                             7245 24 +     12787 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------TTC
i Nomascus_siki_b.tarseq_453                        C 0 C 0
s Nomascus_siki_a.k141_421408                                  1847 24 +     16235 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------TTC
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                39968 24 +   3668941 g--ttt--a---tg-aat-T--T--CTGTCCCT---------------------A---------------CTG
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65573137 28 -  95554990 G--T-TT-A---TG-AAT-TTCTGTCCTTCCTT---------------------A---------------CTA
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_6040852                             774 28 +      1868 G--T-TT-A---TG-AAT-TTCTGTCCTTCCTT---------------------A---------------CTA
i Nycticebus_coucang.k141_6040852                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65681318 28 +  89412551 G--T-TT-A---TG-AAT-TTCTGTCCTTCCTT---------------------A---------------CTA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            5001175 24 -  23139505 G--T-TC-A---TG-AAA-T--T--CAGTCCTT---------------------A---------------CTC
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3692059 21 +  10294119 A--A-CT-G---TG-AAT-T--T--CTGTTCTC---------------------A------------------
i Octodon_degus.JH651621.1                              I 3 I 202
s Odocoileus_virginianus.KZ101650.1                       1085946 23 +   1425656 G--C-T--A---TG-AAT-T--C--CTGTCACT---------------------A---------------CTG
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         44003 23 +     78940 G--C-T--A---TG-AAT-T--C--CTGTCACT---------------------A---------------CTG
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  131714 24 +    145789 G--A-TT-G---TG-AAT-T--T--CTGTCCCT---------------------A---------------CTT
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  44648 24 +     62360 G--G-TT-G---TG-AAT-T--T--CTGTTCCA---------------------A---------------CTT
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7230443 23 -   7562323 G--T-T--A---TG-AAT-T--C--CTGTTGCT---------------------A---------------ctg
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              65282 24 -     66828 A--T-TT-A---TG-AAC-A--T--CTTCCCCT---------------------A---------------CAG
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141885134 24 + 163896628 a--t-tc-a---tg-AAT-T--C--AAGTCTTT---------------------A---------------CTG
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      317105 24 -    505867 g--ttt--a---tg-aaT-T--A--CTGTCCCT---------------------A---------------CTG
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        6270 24 -     53940 G--T-TT-A---TA-AAT-T--T--CTGTCCTT---------------------A---------------CTC
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18014236 24 -  38779656 G--T-TT-A---TA-AAT-T--T--CTGTCCTT---------------------A---------------CTC
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134085206 10 - 275406953 G--C-T--A---TG-AAT-T-----------------------------------------------------
i Ovis_aries.CM001582.2                                 C 0 I 5
s Ovis_canadensis.OviCan_scaffold_6251                      86447 19 +    140051 G--C-T--A---TG-AAT-T--C--CTGTCACT----------------------------------------
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 I 1
s Pan_paniscus.KQ411703.1                                   20196 24 +     41252 g--t-tt-a---ta-aat-t--t--ttgtcCTT---------------------A---------------CTC
i Pan_paniscus.KQ411703.1                               I 65 I 322
s Pan_troglodytes.CM009241.2                            120156819 24 - 196562556 g--t-tt-a---ta-aat-t--t--tcatCCTT---------------------A---------------CTC
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  41867 24 +    295523 G--TTT--A---TG-AAT-T--C--CTTTCCCT---------------------A---------------CTA
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3645683 24 +  18214204 G--TTT--A---TG-AAT-T--C--CTTTCCCT---------------------a---------------cta
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5035320 24 -   6340057 G--TTT--A---TG-AAT-T--C--CTTTCCct---------------------a---------------tta
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1074081  3 -   1292953 ----------------------------------------------------------------------tat
i Pantholops_hodgsonii.KE114631.1                       C 0 I 6
s Papio_anubis.CM001492.2                               188161559 24 - 188283584 g--t-tt-a---ta-aat-t--t--tcaTCCTT---------------------A---------------CTC
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              4649 24 +     25005 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------CTC
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47518931 24 +  47705337 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------CTC
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 72922 24 -    104429 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------CTC
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   11454 24 +     14967 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------CTC
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 7319 24 -      7628 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------CTC
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    123344 24 -    135482 G--TTT--A---TG-AAT-T--C--GTGTCCCT---------------------A---------------CTA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          11932 24 -     23713 G--T-TC-A---TG-AAT-T--T--CTGCCCTT---------------------A---------------CTA
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           13083 24 +     61070 G--T-TC-A---TG-AAT-T--T--CTGCCCTT---------------------A---------------CTA
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       3377 24 +     49596 G--T-AT-A---TG-GATTT--T--CTGTACTT---------------------A---------------G-G
i Perognathus_longimembris.PerPac_flattened_line_19359  I 1 C 0
s Peromyscus_maniculatus.KI615458.1                       2840461 24 -   3366660 G--A-TT-G---TG-AAT-T--T--CTGTCCCT---------------------A---------------CTT
i Peromyscus_maniculatus.KI615458.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    18088 24 -     36578 A--T-CA-G---TG-AAT-C--T--CTATCTTT---------------------A---------------TCA
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              4906 23 +      8220 G--T-T--A---TG-AAT-T--C--CTGTTGCT---------------------A---------------CTG
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Piliocolobus_badius.k141_1987485                           5117 24 -      5908 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------CTC
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       5736 24 -     17985 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------CTC
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            5103 24 +      7694 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------CTC
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26743586 24 +  26888534 g--t-tt-a---ta-aat-t--t--tcaTCCTT---------------------A---------------CTC
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990          11388 23 +     21690 G--T-T--A---TG-AAT-T--C--CTGTCGCT---------------------A---------------CTA
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       27224 24 +     44506 G--T-TT-A---TA-ACT-T--T--TCATCCTT---------------------A---------------ATA
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        27437 24 +     67491 G--T-TT-A---TA-ACT-T--T--TCATCCTT---------------------A---------------GTA
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      17676 24 -     98129 G--T-TT-A---TA-ACT-T--T--TCATCCTT---------------------A---------------GTA
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     27277 24 +    147771 G--T-TT-A---TA-ACT-T--T--TCATCCTT---------------------A---------------GTA
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         3912 24 -     43940 G--T-TT-A---TA-ACT-T--T--TCATCCTT---------------------A---------------ATA
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          7995 24 -     55515 G--T-TT-A---TA-ACT-T--T--TCATCCTT---------------------A---------------GTA
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         27349 24 +    152463 G--T-TT-A---TA-ACT-T--T--TCATCCTT---------------------A---------------GTA
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       5156 24 -    119457 G--T-TT-A---TA-ACT-T--T--TCATCCTT---------------------A---------------GTA
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         17071 24 +    134592 G--T-TT-A---TA-ACT-T--T--TCATCCTT---------------------A---------------GTA
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          27659 24 -     75465 G--T-TT-A---TA-ACT-T--T--TCATCCTT---------------------A---------------GTA
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              192290 24 -    373494 g--t-tt-a---ta-aat-t--t--tcaTCCTT---------------------A---------------CTC
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19812938 24 +  19899266 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------CTC
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               8859 24 -     15069 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------CTC
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              8974 24 +     14865 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------CTC
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                5270 24 -      9567 G--G-TT-G---TG-AAT-A--T--CTTCCCCT---------------------G---------------GTA
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6853886 24 +  12164890 G--T-TT-A---TG-AAT-T--T--CTGTCCTT---------------------A---------------CTG
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     22694 24 -     30946 G--T-TT-A---TG-AAT-T--T--CTGTCCTT---------------------A---------------CTG
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         8994 24 +     11805 G--T-TT-A---TG-AAT-T--T--CTGTCCTT---------------------A---------------CTG
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           48328 24 +     52369 G--T-TT-A---TG-AAT-T--T--CTGTCCTT---------------------A---------------CTG
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         40715 24 -     44753 G--T-TT-A---TG-AAT-T--T--CTGTCCTT---------------------A---------------CTG
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            22638 24 +     27322 G--T-TT-A---TG-AAT-T--T--CTGTCCTT---------------------A---------------CTG
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       22283 24 -     53241 G--T-TT-A---TG-AAT-T--T--CTGTCCTT---------------------A---------------CTG
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         44546 24 -     48185 G--T-TT-A---TG-AAT-T--T--CTGTCCTT---------------------A---------------CTG
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           40272 25 +     77221 A--A-TT-G---TG-AAT-TT-T--TTGCTCCT---------------------G---------------CTT
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        252236 24 -    344369 A--TTT--A---CG-AAT-T--C--CTGTCCCA---------------------A---------------CTG
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13248903 24 -  17261082 t--t-a--t---taAGAT-T--C--CTGTTCCT---------------------A---------------CCG
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             606853 24 -   3946241 t--t-a--t---taaGAT-T--C--CTGTTCCT---------------------A---------------CTG
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131541808 24 - 161321710 G--TTT--A---TG-AAT-T--C--CTTtccat---------------------a---------------cta
i Puma_concolor.QAVW01000427.1                          C 0 I 206
s Pygathrix_cinerea.k141_374971                             32965 24 +     56732 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------CTC
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6809462 24 +   6970761 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------CTC
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             8851 24 +     18040 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------CTC
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                22794 23 +     68503 G--C-T--A---TG-AAT-T--C--CTGTCACT---------------------A---------------CTG
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13920664 24 +  90463843 G--A-TT-G---GG-AGG-T--T--TTCTCCCT---------------------A---------------CTC
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1794730 24 +   2252614 t--t-a--t---taaaat-t--c--cTGTCCCT---------------------A---------------CTG
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                            3230 24 -     17045 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------CTC
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206380717 24 - 206558726 g--t-tt-a---ta-aat-t--t--tcATCCTT---------------------A---------------CTC
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44859620 24 -  45163003 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------CTC
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                22248 24 +    109198 T--T-A--T---TAAAAT-T--C--CTGTTCCT---------------------A---------------CTG
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                      3462 38 -      4338 G--C-T--A---TG-AAT-T--C--CTGTCACt---------------------actgttaaagtatatatat
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 I 7
s Saimiri_boliviensis.NW_024100938.1                     15677673 24 -  43202129 g--t-tt-a---ta-acT-T--T--TCATCCTT---------------------A---------------GTG
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        9587 24 +     34089 G--T-GT-A---TA-ACT-T--T--TCATCCTT---------------------A---------------GTG
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              9526 24 -     60842 G--T-TT-A---TA-ACT-T--T--TCATCCTT---------------------A---------------GTG
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              9620 24 +     67014 G--T-GT-A---TA-ACT-T--T--TCATCCTT---------------------A---------------GTG
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              9597 24 +     60816 G--T-TT-A---TA-ACT-T--T--TCATCCTT---------------------A---------------GTG
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 9534 24 -     76454 G--T-TT-A---TA-ACT-T--T--TCATCCTT---------------------A---------------GTG
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17346304 24 -  30362882 G--T-TT-G---TA-GCT-T--T--TCATCCTT---------------------A---------------GTG
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         25625 24 -     62485 G--T-TT-G---TA-GCT-T--T--TCATCCTT---------------------A---------------GTG
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   41527 12 -    114521 -------------------------CTGTCTCC---------------------A---------------CTA
i Scalopus_aquaticus.ScaAqu_scaffold_9300               I 11 C 0
s Semnopithecus_entellus.k141_1572367                        6466 24 +     15331 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------CTC
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      11841 24 +     20762 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------CTC
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         121845 24 +    130994 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------CTC
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           40625 24 +     46263 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------CTC
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     33770 24 +     42640 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------CTC
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        16792 24 +     30600 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------CTC
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  106825 24 -    120886 G--A-TC-A---TG-AAT-T--T--CTTTCTCA---------------------A---------------CTT
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            26181 14 +    739146 -------------------T--A--CTGTCCTT---------------------A---------------CTA
i Solenodon_paradoxus.SolPar_flattened_line_1012        I 5 C 0
s Sorex_araneus.JH798170.1                               17776515 14 -  27805282 -------------------T--C--CTGACCTT---------------------G---------------ATG
i Sorex_araneus.JH798170.1                              I 9 C 0
s Spermophilus_dauricus.KZ294190.1                        2245183 24 +   2842873 G--T-TT-A---TG-ACT-T--T--CTATCCTC---------------------A---------------CTG
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             241013 24 -    276980 G--TTT--A---TG-AAT-T--C--CTGTCCCT---------------------A---------------CTG
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            35213 24 +     62062 G--TTT--A---TG-AAT-T--C--CTGTCCTT---------------------A---------------CTA
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189277210 24 + 218635234 C--T-T-AA---TG-AAT-T--C--CTGTCCCC---------------------A---------------CTG
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        19970 24 -  13920577 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------CCC
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               18448 24 +     45698 A--T-TT-A---CG-AAC-T--T--CTGTTCCT---------------------A---------------CTG
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      812802 24 +   1148477 G--TTT--A---TG-AAT-T--C--CTGTCCCT---------------------A---------------CTG
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  63444 24 +     99546 G--TTT--A---TG-AAT-T--T--CTGTCCCT---------------------A---------------CTG
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194013092 24 - 194193292 g--t-tt-a---ta-aat-t--t--tcATCCTT---------------------A---------------CTC
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                  1631 24 -      3104 G--T-TT-A---TG-AAT-T--T--CTCTTCCT---------------------A---------------CTG
i Tolypeutes_matacus.TolMat_scaffold_475685             C 0 C 0
s Trachypithecus_auratus.k141_738098                        30113 24 +     38948 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------CTC
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   23673 24 -     32910 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------CTC
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      5574 24 -     12939 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------CTC
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       5002 24 -     14244 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------CTC
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           46395 24 -     54611 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------CTC
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        4196 24 -     11566 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------CTC
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     6380 24 -     15592 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------CTC
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          5032 24 +     14371 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------CTC
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   3318 24 +     12481 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------CTC
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        3299 24 -     24393 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------CTC
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       8443 24 -     28054 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------CTC
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44663227 24 -  44834318 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------CTC
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       5539 24 +     13828 G--T-TT-A---TA-AAT-T--T--TCATCCTT---------------------A---------------CTC
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                  10961 11 +     90398 G--C-T--A---TG-AAT-T--A--------------------------------------------------
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16090980 24 +  31416278 G--T-TT-A---TG-AAT-A--T--CTGCCCCC---------------------A---------------CTA
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2802227 24 -   3938065 G--T-TT-A---TG-AAT-T--T--CCATCCTT---------------------A---------------CTG
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                   11055 24 +     13056 G--T-TT-A---TG-AAT-T--T--CCGTCCTT---------------------A---------------CTG
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69319173 23 -  96451834 G--T-T--A---TG-AAT-T--C--CTGTTGct---------------------a---------------ctg
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                    1917 12 +    136657 -------------------------CTGTCTCC---------------------A---------------TTA
i Uropsilus_gracilis.UroGra_scaffold_4115               I 11 C 0
s Ursus_maritimus.KK498671.1                              6522663 24 +  28682327 g--ttt--a---tg-aaT-T--C--TTGTCCCT---------------------A---------------CTA
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                 10559 24 -     20643 G--T-TT-A---TG-CAT-T--T--CTGTCCTC---------------------A---------------CTG
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             30094 24 -     33872 G--T-TT-A---TG-CAT-T--T--CTGTCCTC---------------------A---------------CTG
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1530205 23 -   2331223 G--T-T--A---TG-AAT-T--C--CTGTCCCT---------------------A---------------CTA
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                146332 24 -    281493 G--TTT--A---TG-AAT-T--A--CTGTCCCT---------------------A---------------CTG
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       132679 23 -    134049 A--T-TT-A---TG-ACT-T--T---TGTTCTC---------------------A---------------CTG
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_202118                     2294 24 -      3360 T--T-TT-A---TA-AAT-C--C--CTGCCCCT---------------------A---------------CTT
i Zapus_hudsonius.ZapHud_scaffold_202118                C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            3765 23 -     13665 G--T-T--A---TG-AAT-T--C--CTGTCGCT---------------------A---------------CTG
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Eptesicus_fuscus.JH977687.1                             4710851  0 +   6522550 C
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Zalophus_californianus.ZalCal_flattened_line_4097        221654  0 -    227762 C
e Tonatia_saurophila.TonSau_scaffold_3334                  140002  0 -    259118 C
e Tadarida_brasiliensis.TadBra_scaffold_61492                4259  0 +     20549 C
e Pteronotus_parnellii.KE867983.1                            7995  0 -     27784 C
e Pipistrellus_pipistrellus.PipPip_scaffold_3306           101415  0 +    112873 C
e Odobenus_rosmarus.KB229369.1                             686793  0 -   3126709 C
e Noctilio_leporinus.NocLep_scaffold_12062                  52626 31 +     94413 I
e Myotis_myotis.MyoMyo_scaffold_6123                        15918  0 +     66751 C
e Myotis_lucifugus.GL429887.1                             3470691  0 -   3747815 C
e Myotis_davidii.KB114863.1                               5024262  0 +   6462685 C
e Myotis_brandtii.KE161952.1                               973184  0 +   8389877 C
e Murina_feae.MurFea_scaffold_2254                          26170  0 -    100666 C
e Mormoops_blainvillei.MorMeg_scaffold_2952                165343  0 +    265003 C
e Miniopterus_schreibersii.MinSch_scaffold_24116            39640  0 +     45743 C
e Miniopterus_natalensis.LDJU01000022.1                   8215181  0 +  10048721 C
e Micronycteris_hirsuta.MicHir_scaffold_37978               26828  0 -     32043 C
e Lasiurus_borealis.LasBor_scaffold_59542                    7402  0 +     26176 C
e Desmodus_rotundus.KZ672188.1                           18703091  0 -  18957592 C
e Carollia_perspicillata.CarPer_scaffold_4436               63873  0 +     67245 C
e Artibeus_jamaicensis.ArtJam_scaffold_41619                12877  0 -     29036 C
e Anoura_caudifer.AnoCau_scaffold_422                      394587  0 -    631301 C
e Hylobates_pileatus_a.tarseq_592                             37267 2881 -     60944 I
e Tarsius_wallacei.k141_48636                               64696  0 +     65473 C
e Tarsius_lariang.k141_609102                               31387  0 +     42269 C
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Cephalopachus_bancanus.k141_702587                        12545  0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530  0 +    345090 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               18707 3 +    209709 T---A--A
s Acinonyx_jubatus.LLWD01000356.1                         2041553 3 +   3721120 N---N--N
i Acinonyx_jubatus.LLWD01000356.1                       I 76 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    119195 3 -    189883 T---A--A
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10665420 3 +  23371972 T---A--A
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7102369 3 -  16596857 T---A--G
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_141108                   2548 3 -      7259 T---G--A
i Allactaga_bullata.AllBul_scaffold_141108              C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   6593 3 -     60446 T---A--A
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         7307 3 -     29318 T---A--A
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         6245 3 +     38766 T---A--A
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          7203 3 -     80423 T---A--A
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              2151 3 +     19852 T---A--A
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                4371 3 -     12443 T---A--A
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                             1694 3 +      5070 T---A--A
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                 1441 3 -      1641 T---A--A
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          4180 3 -     24210 T---A--A
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_494922                              684 3 -      8325 T---A--A
i Alouatta_nigerrima.k141_494922                        C 0 C 0
s Alouatta_palliata.k141_405616                              6598 3 +     16794 T---A--A
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_347198                              627 3 +      9111 T---A--A
i Alouatta_puruensis.k141_347198                        C 0 C 0
s Alouatta_seniculus.k141_790278                             5875 3 -      9835 T---A--A
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             5786 3 +     55446 t---t--a
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 67485 3 +     78111 T---A--A
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                           10429 3 +     22701 T---A--A
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5754395 3 +   9889416 T---A--A
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                            10973 3 -    104377 T---A--A
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                              11002 3 +     23246 T---A--A
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     3632 3 +     11424 T---A--A
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        7574 4 +      9265 T---AA-A
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9544285 3 +  39197703 T---A--A
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             65559 3 +     85812 T---A--A
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                16569 3 +     89302 T---A--A
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             21073 3 -     58268 T---A--A
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             69067 3 +    119057 T---A--A
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              11036 3 -     25888 T---A--A
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                12110 3 -     16375 T---A--A
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               5726 3 +      6337 T---A--A
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26386012 3 +  51448160 T---A--A
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                       11185 3 -     13118 T---A--A
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Bison_bison.KN264915.1                                   305543 6 -   6870073 TCTAT--A
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22959649 6 + 161108492 TCTAT--A
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     421828 6 +    998990 TCTAT--A
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22668301 6 + 158972876 TCTAT--A
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               677139 6 +   1914593 TCtat--a
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               118905 3 -    171031 T---A--A
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 17925 3 +    125063 T---A--A
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                19972 3 -    216513 T---A--A
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       12515 3 -    134917 T---A--A
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3225120 3 -   8989139 T---A--G
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           402820 3 -  15254737 T---A--G
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2978558 3 +   6889770 T---A--G
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11528272 3 +  39901454 T---A--A
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   23246 3 +     87036 T---A--A
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11275169 3 -  35597290 T---A--A
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11097666 3 +  39895921 T---A--A
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16464451 3 -  44759192 T---A--A
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capromys_pilorides.CapPil_scaffold_1011243                   64 3 +      1208 t---a--a
i Capromys_pilorides.CapPil_scaffold_1011243            I 27 I 267
s Castor_canadensis.CasCan_scaffold_1326                     1119 3 -    202837 T---G--A
i Castor_canadensis.CasCan_scaffold_1326                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   164859 3 -    276539 T---G--A
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15790858 3 -  24422027 T---A--G
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15802803 3 -  24440124 T---A--G
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       180975 3 +    436027 T---A--G
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18896640 3 -  29618158 T---A--A
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                13290 3 -     26817 T---A--A
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                17534 3 +     25043 T---A--A
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4370093 3 +   7569818 T---A--A
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_171732          250 3 +      8380 T---A--A
i Ceratotherium_simum_cottoni.CerCot_scaffold_171732    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6560533 3 +   6739814 T---A--A
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      32010 3 +     60454 T---A--A
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          7214 3 -     21101 T---A--A
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         64524 3 -    107033 T---A--A
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        7384 3 -     17608 T---A--A
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          4552 3 +     45019 T---A--A
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           4828 3 +     15177 T---A--A
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          7434 3 +     16677 T---A--A
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           29630 3 +     35983 T---A--A
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11996155 3 +  12117833 T---A--A
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46483137 3 +  46592721 T---A--A
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                       1248 3 -     27215 T---A--A
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       7448 3 +     35577 T---A--A
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        7242 3 -     25661 T---A--A
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        7414 3 -     17744 T---A--A
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        26783 3 +     37128 T---A--A
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Cheirogaleus_major.k141_1157592                           64326 3 -     68416 T---A--A
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_854352                             628 3 +     27737 T---A--A
i Cheirogaleus_medius.k141_854352                       C 0 C 0
s Cheracebus_lucifer.k141_619653                            10596 3 -     18223 T---A--A
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              2337 3 +    188999 T---A--A
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           46636 3 +     57117 T---A--A
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          51316 3 +     54541 T---A--A
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15965483 3 +  43084221 t---a--a
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         76117 3 +    196370 T---A--A
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          20298 3 +     40510 T---A--A
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15144968 3 -  15256731 T---A--A
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      39432 3 -     53260 T---A--A
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101149991 3 + 101219884 T---A--A
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                19833 3 -     21363 C---A--A
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           765137 3 +    964067 C---A--A
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_304221               411 3 -      7053 T---A--A
i Chrysochloris_asiatica.ChrAsi_scaffold_304221         C 0 C 0
s Colobus_angolensis.KN985967.1                          10889762 3 +  10971483 T---A--A
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147667690 3 + 156195979 T---A--A
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            19673 3 +     23629 T---A--A
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60624110 3 +  78930452 T---A--A
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         4506 3 -      5782 G---T--A
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 284100 3 -    399297 T---G--A
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53036386 3 +  72327488 T---G--A
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              3993 3 -     22648 G---A--A
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            59489 3 -     70449 T---A--A
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  216233 3 -    956709 T---A--A
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                22052 3 +     26546 T---A--A
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             63196 3 -    236241 C---A--A
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          186854 3 -   6883506 T---A--A
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16850272 3 +  31942871 T---A--A
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80042604 3 -  96802777 t---a--a
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 328492 3 +    993696 T---A--A
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   9126 3 +    151128 T---A--A
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   160958 3 +    228994 T---A--A
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3661407 3 +   4240102 T---G--A
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  3781 3 -     11986 T---G--A
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                41761 3 -     73477 T---A--A
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           23002613 3 -  44670279 T---A--A
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 15216 3 +     24177 T---A--A
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1498538 3 +   1727528 T---T--a
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7835571 3 +  15467074 T---A--A
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        245096 3 -    369425 T---G--A
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01076532.1                           1448 3 +      9159 T---G--A
i Ellobius_talpinus.LOJH01076532.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85879416 3 +  99434291 T---A--A
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Equus_asinus.JREZ01000062.1                             5858355 3 -   7175178 T---A--A
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13356841 3 +  41866177 T---A--A
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          18331 3 +     92910 T---A--A
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11543504 3 +  16010500 a---g--a
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48782001 3 -  48907691 T---A--A
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          320855 3 +    330699 T---A--A
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             67311 3 +     89355 T---A--A
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                             10390 3 +     13586 T---A--A
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_1015201                              3649 3 -      4292 T---A--A
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            16786 3 +     36558 T---A--A
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            13108 3 +     60246 T---A--A
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                16593 3 +    109717 T---A--A
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 4576 3 -     19505 T---A--A
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                21251 3 +     27497 T---A--A
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           23707 3 +     26808 T---A--A
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                38439 3 +     46535 T---A--A
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              21180 3 -     29447 T---A--A
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129901126 3 - 159252932 t---a--a
i Felis_catus.CM001386.2                                I 2 C 0
s Felis_catus_fca126.CM031420.1                         129288103 3 - 158578461 t---a--a
i Felis_catus_fca126.CM031420.1                         I 2 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 29293 3 +     52776 T---A--A
i Felis_nigripes.FelNig_flattened_line_8080             I 2 C 0
s Fukomys_damarensis.KN123630.1                          13897429 3 -  19261668 T---A--A
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     216433 3 -    847004 T---A--A
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           18795 3 -     43889 T---A--A
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          15936 3 +     27357 T---A--A
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               160713 3 +    324696 T---A--A
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    188306 3 -    189561 t---t--a
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           17624 3 -     18683 T---A--A
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                              10404 3 -     14630 T---A--A
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119657504 3 - 195582420 T---A--A
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   80942 3 +    118900 T---A--A
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         7180 3 +     10286 T---A--A
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             5661 3 -     11661 T---A--A
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                            10985 3 +     56096 T---A--A
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        34234 3 -     42470 T---A--A
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        50860 3 -     54384 T---A--A
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              24607 3 +     53719 T---A--A
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2561759 3 +  31725842 T---A--c
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               64190 3 +     73687 T---A--A
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              152655 3 +    277961 T---G--A
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      285702 3 -    477199 t---a--a
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959               3387 3 +     26078 t---a--a
i Hipposideros_galeritus.HipGal_scaffold_52959          C 0 C 0
s Hoolock_leuconedys.ctg79                                     10329 3 -   7690867 T---A--A
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 25043 3 -     67322 T---A--A
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           22405 3 -    119109 T---C--A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_1816750                             2900 3 +      3202 T---A--A
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1136966                               909 3 +      9785 T---A--A
i Hylobates_agilis.k141_1136966                         C 0 C 0
s Hylobates_klossii.k141_468230                              4389 3 +      5464 T---A--A
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14629735 3 -  25970782 T---A--A
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            2287 3 +      4161 T---A--A
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                    10670 3 +     22540 T---A--A
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7131506 3 +  13083262 T---A--C
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   2722 3 +      3484 T---A--A
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              14834 3 +     17520 T---A--A
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8580296 3 +  11848649 T---G--A
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               29451 3 +     37189 T---A--A
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          55157 3 -    147782 T---A--A
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lemur_catta.scaffold_1                                258412538 3 - 285822530 T---A--A
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        29866 3 +     39228 T---A--A
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            59230 3 +     63517 T---A--A
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        37612 3 -     38897 T---A--A
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      3656 3 -     13103 T---A--A
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3093364 3 -   3498232 T---A--A
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    22142 3 +     22452 T---A--A
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            141761 3 +   3060487 T---A--A
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19253622 3 +  19376315 T---A--A
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           16395 4 +     84689 T---AA-A
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3784128 4 +   6799190 T---AA-A
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20599930 3 -  62548349 T---A--A
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11097122 3 +  39895028 T---A--A
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             25371 3 +     74745 T---A--A
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12711834 3 +  12821369 T---A--A
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                4407 3 -     26467 T---A--A
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           52278 3 +     63263 T---A--A
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 4388 3 -     26361 T---A--A
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_2667654                                 691 3 -      5626 T---A--A
i Macaca_leonina.k141_2667654                           C 0 C 0
s Macaca_maura.k141_251854                                  50807 3 -     79256 T---A--A
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196040905 3 + 196197964 T---A--A
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11451075 3 +  11645122 T---A--A
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   9761 3 -     46448 T---A--A
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                7422 3 -     13212 T---A--A
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 21104 3 -     55006 T---A--A
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43846526 3 +  43892939 T---A--A
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               22388 3 -     24607 T---A--A
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               9758 3 -     27140 T---A--A
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                703827 3 +    802869 T---A--A
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43442791 3 -  43563597 T---A--A
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4455590 3 -   4543643 T---A--A
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            154112 3 +    252755 T---A--A
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             41710 3 +     58827 T---A--A
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36879372 3 +  64221397 T---A--C
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       67624 3 -    234502 G---A--A
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             8511 3 -     87323 T---G--A
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 3321 3 +    115071 T---G--A
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1052960 3 -  26018355 T---G--A
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    4422 3 -     12939 T---A--A
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16515590 3 +  47401472 T---A--A
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  44239 3 -     48017 T---A--A
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22825932 3 -  98408828 T---G--A
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         7340 3 +     29742 T---A--A
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        18860 3 -    104932 T---A--A
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     6285 3 -     12809 T---A--A
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 152197 3 +    154973 T---A--A
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  8997 3 -     19904 T---T--A
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  152336 3 -    168139 T---A--A
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Mus_caroli.LT608236.1                                  70773202 3 +  92629107 T---G--A
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75495266 3 +  98207768 T---G--A
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67561993 3 +  89017189 T---G--A
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74337974 3 +  97876770 T---G--A
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             16009 3 +     98495 T---A--A
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4430614 3 -  28371801 T---A--A
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     96751 3 -    117718 T---G--A
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 I 213
s Myrmecophaga_tridactyla.MyrTri_scaffold_12795               203 3 -     87886 t---a--a
i Myrmecophaga_tridactyla.MyrTri_scaffold_12795         C 0 I 3
s Nannospalax_galili.KL201303.1                            125677 3 +    362372 T---G--A
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                              11601 3 +     48152 T---A--A
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4492251 3 -  14209539 T---A--A
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3956788 3 -   4490290 t---a--a
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Nomascus_annamensis.k141_762468                            1406 3 -      2755 T---A--A
i Nomascus_annamensis.k141_762468                       C 0 C 0
s Nomascus_concolor.k141_256540                              8016 3 -      8966 T---A--A
i Nomascus_concolor.k141_256540                         C 0 C 0
s Nomascus_gabriellae.k141_1400361                           1957 3 -      2203 T---A--A
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_453                             7269 3 +     12787 T---A--A
i Nomascus_siki_b.tarseq_453                        C 0 C 0
s Nomascus_siki_a.k141_421408                                  1871 3 +     16235 T---A--A
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                39992 3 +   3668941 T---A--A
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65573165 5 -  95554990 T---AAAA
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_6040852                             802 5 +      1868 T---AAAA
i Nycticebus_coucang.k141_6040852                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65681346 4 +  89412551 T---AA-A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            5001199 3 -  23139505 T---G--A
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1085969 3 +   1425656 T---T--A
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         44026 3 +     78940 T---T--a
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  131738 3 +    145789 T---G--A
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  44672 3 +     62360 T---G--A
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7230466 3 -   7562323 t---a--a
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              65306 1 -     66828 T-------
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141885158 3 + 163896628 T---A--A
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      317129 3 -    505867 T---A--A
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        6294 3 -     53940 T---A--C
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18014260 3 -  38779656 T---A--A
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Pan_paniscus.CM003386.1                               127579683 3 - 205426864 T---A--A
i Pan_paniscus.CM003386.1                               I 24 C 0
s Pan_troglodytes.CM009241.2                            120156843 3 - 196562556 T---A--A
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  41891 3 +    295523 T---A--A
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3645707 3 +  18214204 t---a--a
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5035344 3 -   6340057 t---a--a
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1074090 1 -   1292953 t-------
i Pantholops_hodgsonii.KE114631.1                       I 6 I 3
s Papio_anubis.CM001492.2                               188161583 3 - 188283584 T---A--A
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              4673 3 +     25005 T---A--A
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47518955 3 +  47705337 T---A--A
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 72946 3 -    104429 T---A--A
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   11478 3 +     14967 T---A--A
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 7343 3 -      7628 T---A--A
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    123368 3 -    135482 T---A--A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          11956 3 -     23713 T---A--A
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           13107 3 +     61070 T---A--A
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       3401 3 +     49596 T---G--A
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615458.1                       2840485 3 -   3366660 T---G--A
i Peromyscus_maniculatus.KI615458.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    18112 3 -     36578 T---A--A
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              4929 3 +      8220 T---A--A
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Piliocolobus_badius.k141_1987485                           5141 3 -      5908 T---A--A
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       5760 3 -     17985 T---A--A
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            5127 3 +      7694 T---A--A
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26743610 3 +  26888534 T---A--A
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990          11411 3 +     21690 T---A--A
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       27248 3 +     44506 T---A--A
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        27461 3 +     67491 T---A--A
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      17700 3 -     98129 T---A--A
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     27301 3 +    147771 T---A--A
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         3936 3 -     43940 T---A--A
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          8019 3 -     55515 T---A--A
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         27373 3 +    152463 T---A--A
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       5180 3 -    119457 T---A--A
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         17095 3 +    134592 T---A--A
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          27683 3 -     75465 T---A--A
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              192314 3 -    373494 T---A--A
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19812962 3 +  19899266 T---A--A
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               8883 3 -     15069 T---A--A
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              8998 3 +     14865 T---A--A
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                5294 3 -      9567 T---A--A
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6853910 3 +  12164890 T---A--A
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     22718 3 -     30946 T---A--A
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         9018 3 +     11805 T---A--A
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           48352 3 +     52369 T---A--A
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         40739 3 -     44753 T---A--A
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            22662 3 +     27322 T---A--A
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       22307 3 -     53241 T---A--A
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         44570 3 -     48185 T---A--A
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           40297 3 +     77221 T---G--A
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        252260 3 -    344369 T---A--A
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13248927 3 -  17261082 T---A--A
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             606877 3 -   3946241 T---A--A
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131542038 3 - 161321710 t---a--a
i Puma_concolor.QAVW01000427.1                          I 206 C 0
s Pygathrix_cinerea.k141_374971                             32989 3 +     56732 T---A--A
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6809486 3 +   6970761 T---A--A
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             8875 3 +     18040 T---A--A
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                22817 3 +     68503 T---T--A
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13920688 3 +  90463843 T---G--A
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1794754 3 +   2252614 T---A--A
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                            3254 3 -     17045 T---A--A
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206380741 3 - 206558726 T---A--A
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44859644 3 -  45163003 T---A--A
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                22272 3 +    109198 T---A--A
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                      3507 1 -      4338 t-------
i Saiga_tatarica.SaiTat_scaffold_371890                 I 7 I 3
s Saimiri_boliviensis.NW_024100938.1                     15677697 3 -  43202129 T---A--A
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        9611 3 +     34089 T---A--A
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              9550 3 -     60842 T---A--A
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              9644 3 +     67014 T---A--A
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              9621 3 +     60816 T---A--A
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 9558 3 -     76454 T---A--A
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17346328 3 -  30362882 T---A--A
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         25649 3 -     62485 T---A--A
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   41539 3 -    114521 T---G--A
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        6490 3 +     15331 T---A--A
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      11865 3 +     20762 T---A--A
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         121869 3 +    130994 T---A--A
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           40649 3 +     46263 T---A--A
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     33794 3 +     42640 T---A--A
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        16816 3 +     30600 T---A--A
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  106849 3 -    120886 T---G--A
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            26195 3 +    739146 T---A--A
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17776529 3 -  27805282 A---A--A
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2245207 3 +   2842873 T---A--C
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             241037 3 -    276980 T---A--A
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            35237 3 +     62062 T---A--A
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189277234 3 + 218635234 T---G--A
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        19994 3 -  13920577 T---A--A
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               18472 3 +     45698 T---A--A
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      812826 3 +   1148477 T---A--A
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  63468 3 +     99546 T---A--A
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194013116 3 - 194193292 T---A--A
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                  1655 3 -      3104 C---T--A
i Tolypeutes_matacus.TolMat_scaffold_475685             C 0 C 0
s Trachypithecus_auratus.k141_738098                        30137 3 +     38948 T---A--A
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   23697 3 -     32910 T---A--A
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      5598 3 -     12939 T---A--A
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       5026 3 -     14244 T---A--A
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           46419 3 -     54611 T---A--A
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        4220 3 -     11566 T---A--A
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     6404 3 -     15592 T---A--A
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          5056 3 +     14371 T---A--A
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   3342 3 +     12481 T---A--A
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        3323 3 -     24393 T---A--A
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       8467 3 -     28054 T---A--A
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44663251 3 -  44834318 T---A--A
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       5563 3 +     13828 T---A--A
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                  10972 1 +     90398 -------A
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16091004 3 +  31416278 T---A--A
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2802251 3 -   3938065 T---A--A
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                   11079 3 +     13056 T---A--A
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69319196 3 -  96451834 t---a--a
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                    1929 3 +    136657 G---A--A
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 C 0
s Ursus_maritimus.KK498671.1                              6522687 3 +  28682327 T---A--A
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                 10583 3 -     20643 T---A--A
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             30118 3 -     33872 T---A--A
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1530228 3 -   2331223 T---A--G
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                146356 3 -    281493 T---A--A
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       132702 3 -    134049 A---A--A
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_202118                     2318 3 -      3360 C---A--A
i Zapus_hudsonius.ZapHud_scaffold_202118                C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            3788 3 -     13665 T---A--A
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Eptesicus_fuscus.JH977687.1                             4710851 0 +   6522550 C
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Chaetophractus_vellerosus.ChaVel_scaffold_197251           5808 0 -      6963 C
e Zalophus_californianus.ZalCal_flattened_line_4097        221654 0 -    227762 C
e Tonatia_saurophila.TonSau_scaffold_3334                  140002 0 -    259118 C
e Tadarida_brasiliensis.TadBra_scaffold_61492                4259 0 +     20549 C
e Pteronotus_parnellii.KE867983.1                            7995 0 -     27784 C
e Pipistrellus_pipistrellus.PipPip_scaffold_3306           101415 0 +    112873 C
e Ovis_canadensis.OviCan_scaffold_6251                      86466 1 +    140051 I
e Ovis_aries.CM001582.2                                 134085216 5 - 275406953 I
e Odobenus_rosmarus.KB229369.1                             686793 0 -   3126709 C
e Noctilio_leporinus.NocLep_scaffold_12062                  52626 31 +     94413 I
e Myotis_myotis.MyoMyo_scaffold_6123                        15918 0 +     66751 C
e Myotis_lucifugus.GL429887.1                             3470691 0 -   3747815 C
e Myotis_davidii.KB114863.1                               5024262 0 +   6462685 C
e Myotis_brandtii.KE161952.1                               973184 0 +   8389877 C
e Murina_feae.MurFea_scaffold_2254                          26170 0 -    100666 C
e Mormoops_blainvillei.MorMeg_scaffold_2952                165343 0 +    265003 C
e Miniopterus_schreibersii.MinSch_scaffold_24116            39640 0 +     45743 C
e Miniopterus_natalensis.LDJU01000022.1                   8215181 0 +  10048721 C
e Micronycteris_hirsuta.MicHir_scaffold_37978               26828 0 -     32043 C
e Lasiurus_borealis.LasBor_scaffold_59542                    7402 0 +     26176 C
e Hemitragus_hylocrius.HemHyl_scaffold_16669                35434 5 -     91191 I
e Desmodus_rotundus.KZ672188.1                           18703091 0 -  18957592 C
e Carollia_perspicillata.CarPer_scaffold_4436               63873 0 +     67245 C
e Capra_hircus.CM004562.1                               135714405 1 - 157403528 I
e Capra_aegagrus.CM003214.1                              21336052 1 + 157394656 I
e Beatragus_hunteri.BeaHun_scaffold_21644                   50601 0 -     72089 C
e Artibeus_jamaicensis.ArtJam_scaffold_41619                12877 0 -     29036 C
e Anoura_caudifer.AnoCau_scaffold_422                      394587 0 -    631301 C
e Ammotragus_lervia.NIVO01013474.1                        3528619 1 +   4113121 I
e Hylobates_pileatus_a.tarseq_592                             37267 2881 -     60944 I
e Tarsius_wallacei.k141_48636                               64696 0 +     65473 C
e Tarsius_lariang.k141_609102                               31387 0 +     42269 C
e Pithecia_vanzolinii.k141_831006                           15424 0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514 0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521 0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292 0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093 0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038 0 +     78826 C
e Pithecia_albicans.k141_991845                             45662 0 -     61926 C
e Octodon_degus.JH651621.1                                3692080 202 +  10294119 I
e Ctenomys_sociabilis.CteSoc_scaffold_19489                 37002 206 -     67205 I
e Cephalopachus_bancanus.k141_702587                        12545 0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530 0 +    345090 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               18710 3 +    209709 A-AC
s Acinonyx_jubatus.LLWD01000356.1                         2041556 3 +   3721120 N-NN
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    119198 3 -    189883 A-AG
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10665423 3 +  23371972 A-AG
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7102372 3 -  16596857 A-AG
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_141108                   2551 3 -      7259 A-AG
i Allactaga_bullata.AllBul_scaffold_141108              C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   6596 3 -     60446 A-AG
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         7310 3 -     29318 A-AG
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         6248 3 +     38766 A-AG
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          7206 3 -     80423 A-AG
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              2154 3 +     19852 A-AG
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                4374 3 -     12443 A-AG
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                             1697 3 +      5070 A-AG
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                 1444 3 -      1641 A-AG
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          4183 3 -     24210 A-AG
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_494922                              687 3 -      8325 A-AG
i Alouatta_nigerrima.k141_494922                        C 0 C 0
s Alouatta_palliata.k141_405616                              6601 3 +     16794 A-AG
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_347198                              630 3 +      9111 A-AG
i Alouatta_puruensis.k141_347198                        C 0 C 0
s Alouatta_seniculus.k141_790278                             5878 3 -      9835 A-AG
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             5789 3 +     55446 a-aa
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 67488 3 +     78111 A-AG
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                           10432 3 +     22701 A-AG
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5754398 3 +   9889416 A-AG
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                            10976 3 -    104377 A-AG
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                              11005 3 +     23246 A-AG
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     3635 3 +     11424 A-AG
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        7578 3 +      9265 A-AA
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9544288 3 +  39197703 A-AG
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             65562 3 +     85812 A-AG
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                16572 3 +     89302 A-AG
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             21076 3 -     58268 A-AG
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             69070 3 +    119057 A-AG
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              11039 3 -     25888 A-AG
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                12113 3 -     16375 A-AG
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               5729 3 +      6337 A-AG
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26386015 3 +  51448160 A-AG
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                       11188 3 -     13118 A-AG
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Bison_bison.KN264915.1                                   305549 3 -   6870073 A-AG
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22959655 3 + 161108492 A-AG
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     421834 3 +    998990 A-AG
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22668307 3 + 158972876 A-AG
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               677145 3 +   1914593 a-ag
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               118908 3 -    171031 A-AG
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 17928 3 +    125063 A-AG
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                19975 3 -    216513 A-AG
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       12518 3 -    134917 A-AG
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3225123 3 -   8989139 A-AG
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           402823 3 -  15254737 A-AG
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2978561 3 +   6889770 A-AG
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11528275 3 +  39901454 A-AG
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   23249 3 +     87036 A-AG
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11275172 3 -  35597290 A-AG
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11097669 3 +  39895921 A-AG
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16464454 3 -  44759192 A-AG
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capromys_pilorides.CapPil_scaffold_1011243                  334 3 +      1208 a-ag
i Capromys_pilorides.CapPil_scaffold_1011243            I 267 C 0
s Castor_canadensis.CasCan_scaffold_1326                     1122 3 -    202837 A-AA
i Castor_canadensis.CasCan_scaffold_1326                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   164862 3 -    276539 A-AG
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15790861 3 -  24422027 A-TG
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15802806 3 -  24440124 A-TG
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       180978 3 +    436027 A-TG
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18896643 3 -  29618158 A-AG
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                13293 3 -     26817 A-AG
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                17537 3 +     25043 A-AG
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4370096 3 +   7569818 G-AG
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_171732          253 3 +      8380 G-AG
i Ceratotherium_simum_cottoni.CerCot_scaffold_171732    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6560536 3 +   6739814 A-AG
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      32013 3 +     60454 A-AG
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          7217 3 -     21101 A-AG
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         64527 3 -    107033 A-AG
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        7387 3 -     17608 A-AG
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          4555 3 +     45019 A-AG
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           4831 3 +     15177 A-AG
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          7437 3 +     16677 A-AG
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           29633 3 +     35983 A-AG
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11996158 3 +  12117833 A-AG
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46483140 3 +  46592721 A-AG
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                       1251 3 -     27215 A-AG
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       7451 3 +     35577 A-AG
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        7245 3 -     25661 A-AG
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        7417 3 -     17744 A-AG
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        26786 3 +     37128 A-AG
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           5808 3 -      6963 A-TA
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           64329 3 -     68416 A-AG
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_854352                             631 3 +     27737 A-AG
i Cheirogaleus_medius.k141_854352                       C 0 C 0
s Cheracebus_lucifer.k141_619653                            10599 3 -     18223 A-AG
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              2340 3 +    188999 A-AG
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           46639 3 +     57117 A-AG
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          51319 3 +     54541 A-AG
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15965486 3 +  43084221 a-aa
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         76120 3 +    196370 A-AG
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          20301 3 +     40510 A-AG
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15144971 3 -  15256731 A-AG
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      39435 3 -     53260 A-AG
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101149994 3 + 101219884 A-AG
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                19836 3 -     21363 A-AG
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           765140 3 +    964067 A-AG
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_304221               414 2 -      7053 A-A-
i Chrysochloris_asiatica.ChrAsi_scaffold_304221         C 0 I 2344
s Colobus_angolensis.KN985967.1                          10889765 3 +  10971483 A-AG
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147667693 3 + 156195979 A-AG
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            19676 3 +     23629 A-AG
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60624113 3 +  78930452 A-GT
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         4509 3 -      5782 A-AG
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 284103 3 -    399297 A-AG
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53036389 3 +  72327488 A-AG
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              3996 3 -     22648 A-AG
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            59492 3 -     70449 A-AG
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  216236 3 -    956709 A-GG
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 37208 3 -     67205 a-ag
i Ctenomys_sociabilis.CteSoc_scaffold_19489             I 206 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                22055 3 +     26546 A-TG
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             63199 3 -    236241 A-TG
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          186857 3 -   6883506 A-AG
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16850275 3 +  31942871 A-AG
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80042607 3 -  96802777 a-ag
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 328495 3 +    993696 G-AG
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   9129 3 +    151128 G-AG
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   160961 3 +    228994 A-GT
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3661410 3 +   4240102 A-GA
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  3784 3 -     11986 A-GA
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                41764 3 -     73477 A-TG
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           23002616 3 -  44670279 T-AT
i Echinops_telfairi.JH980316.1                          C 0 I 2412
s Eidolon_helvum.KE772537.1                                 15219 3 +     24177 A-AG
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1498541 3 +   1727528 a-ag
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7835574 3 +  15467074 g-ag
i Elephantulus_edwardii.JH947210.1                      C 0 I 973
s Ellobius_lutescens.LOEQ01003611.1                        245099 3 -    369425 A-AG
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01076532.1                           1451 3 +      9159 A-AG
i Ellobius_talpinus.LOJH01076532.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85879419 3 +  99434291 A-AG
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Equus_asinus.JREZ01000062.1                             5858358 3 -   7175178 G-AG
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13356844 3 +  41866177 G-AG
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          18334 3 +     92910 G-AG
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11543507 3 +  16010500 a-ag
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48782004 3 -  48907691 A-AG
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          320858 3 +    330699 A-AG
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             67314 3 +     89355 A-AG
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                             10393 3 +     13586 A-AG
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_1015201                              3652 3 -      4292 A-AG
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            16789 3 +     36558 A-AG
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            13111 3 +     60246 A-AG
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                16596 3 +    109717 A-AG
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 4579 3 -     19505 A-AG
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                21254 3 +     27497 A-AG
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           23710 3 +     26808 A-AG
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                38442 3 +     46535 A-AG
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              21183 3 -     29447 A-AG
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129901129 3 - 159252932 a-ag
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129288106 3 - 158578461 a-ag
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 29296 3 +     52776 A-AG
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13897432 3 -  19261668 A-AG
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     216436 3 -    847004 A-TA
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           18798 3 -     43889 A-TA
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          15939 3 +     27357 A-TA
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               160716 3 +    324696 A-AG
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    188309 3 -    189561 a-ag
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           17627 3 -     18683 G-AG
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                              10407 3 -     14630 A-AG
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119657507 3 - 195582420 A-AG
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   80945 3 +    118900 A-AG
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         7183 3 +     10286 A-AG
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             5664 3 -     11661 A-AG
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                            10988 3 +     56096 A-AG
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        34237 3 -     42470 A-AG
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        50863 3 -     54384 A-AG
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              24610 3 +     53719 A-AG
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2561762 3 +  31725842 a-ag
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               64193 3 +     73687 A-AG
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              152658 3 +    277961 A-AG
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      285705 3 -    477199 a-ag
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959               3390 3 +     26078 a-ag
i Hipposideros_galeritus.HipGal_scaffold_52959          C 0 C 0
s Hoolock_leuconedys.ctg79                                     10332 3 -   7690867 A-AG
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 25046 3 -     67322 A-AG
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           22408 3 -    119109 A-TG
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_1816750                             2903 3 +      3202 A-AG
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1136966                               912 3 +      9785 A-AG
i Hylobates_agilis.k141_1136966                         C 0 C 0
s Hylobates_klossii.k141_468230                              4392 3 +      5464 A-AG
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14629738 3 -  25970782 A-AG
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            2290 3 +      4161 A-AG
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                    10673 3 +     22540 A-AG
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7131509 3 +  13083262 A-Ag
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   2725 3 +      3484 A-AG
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              14837 3 +     17520 A-AG
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8580299 3 +  11848649 A-AG
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               29454 3 +     37189 A-AG
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          55160 3 -    147782 A-AG
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lemur_catta.scaffold_1                                258412541 3 - 285822530 A-AG
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        29869 3 +     39228 A-AG
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            59233 3 +     63517 A-AG
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        37615 3 -     38897 A-AG
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      3659 3 -     13103 A-AG
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3093367 3 -   3498232 A-AT
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    22145 3 +     22452 A-AG
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            141764 3 +   3060487 A-AG
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19253625 3 +  19376315 A-AG
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           16399 3 +     84689 A-AA
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3784132 3 +   6799190 A-AA
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20599933 3 -  62548349 A-AG
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11097125 3 +  39895028 A-AG
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             25374 3 +     74745 A-AG
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12711837 3 +  12821369 A-AG
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                4410 3 -     26467 A-AG
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           52281 3 +     63263 A-AG
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 4391 3 -     26361 A-AG
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_2667654                                 694 3 -      5626 A-AG
i Macaca_leonina.k141_2667654                           C 0 C 0
s Macaca_maura.k141_251854                                  50810 3 -     79256 A-AG
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196040908 3 + 196197964 A-AG
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11451078 3 +  11645122 A-AG
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   9764 3 -     46448 A-AG
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                7425 3 -     13212 A-AG
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 21107 3 -     55006 A-AG
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43846529 3 +  43892939 A-AG
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               22391 3 -     24607 A-AG
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               9761 3 -     27140 A-AG
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                703830 3 +    802869 A-AG
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43442794 3 -  43563597 A-AG
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4455593 3 -   4543643 A-AG
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            154115 3 +    252755 A-AG
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             41713 3 +     58827 A-AG
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36879375 3 +  64221397 A-Ag
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       67627 3 -    234502 A-AG
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             8514 3 -     87323 A-AG
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 3324 3 +    115071 A-AG
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1052963 3 -  26018355 A-AG
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    4425 3 -     12939 A-AG
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16515593 3 +  47401472 A-AG
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  44242 3 -     48017 T-AT
i Microgale_talazaci.MicTal_scaffold_34660              C 0 I 2401
s Microtus_ochrogaster.CM001673.1                        22825935 3 -  98408828 A-AG
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         7343 3 +     29742 A-AG
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        18863 3 -    104932 A-AT
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     6288 3 -     12809 A-AG
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 152200 3 +    154973 A-AG
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  9000 3 -     19904 A-AG
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  152339 3 -    168139 A-AG
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Mus_caroli.LT608236.1                                  70773205 3 +  92629107 A-AG
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75495269 3 +  98207768 A-AG
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67561996 3 +  89017189 A-AG
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74337977 3 +  97876770 A-AG
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             16012 3 +     98495 A-CG
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4430617 3 -  28371801 A-AG
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     96967 3 -    117718 a-ag
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 213 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_239326              206 3 +      2245 A-AG
i Myrmecophaga_tridactyla.MyrTri_scaffold_239326        n 3 I 5
s Nannospalax_galili.KL201303.1                            125680 3 +    362372 A-GG
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                              11604 3 +     48152 A-AG
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4492254 3 -  14209539 A-AT
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3956791 3 -   4490290 a-ag
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Nomascus_annamensis.k141_762468                            1409 3 -      2755 A-AG
i Nomascus_annamensis.k141_762468                       C 0 C 0
s Nomascus_concolor.k141_256540                              8019 3 -      8966 A-AG
i Nomascus_concolor.k141_256540                         C 0 C 0
s Nomascus_gabriellae.k141_1400361                           1960 3 -      2203 A-AG
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_453                             7272 3 +     12787 A-AG
i Nomascus_siki_b.tarseq_453                        C 0 C 0
s Nomascus_siki_a.k141_421408                                  1874 3 +     16235 A-AA
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                39995 3 +   3668941 A-AG
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65573170 4 -  95554990 AAAA
i Nycticebus_bengalensis.LG16                           C 0 I 3
s Nycticebus_coucang.k141_6040852                             807 3 +      1868 A-AA
i Nycticebus_coucang.k141_6040852                       C 0 I 3
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65681350 3 +  89412551 A-AA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 I 3
s Ochotona_princeps.JH802095.1                            5001202 3 -  23139505 C-AG
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3692282 3 +  10294119 A-ag
i Octodon_degus.JH651621.1                              I 202 C 0
s Odocoileus_virginianus.KZ101650.1                       1085972 3 +   1425656 a-ag
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         44029 3 +     78940 a-ag
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  131741 3 +    145789 A-AG
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  44675 3 +     62360 A-AG
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7230469 3 -   7562323 a-ag
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_13509              65307 2 -     66828 --AA
i Orycteropus_afer.OryAfe_flattened_line_13509          C 0 N 0
s Oryctolagus_cuniculus.CM000803.1                      141885161 3 + 163896628 A-AG
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      317132 3 -    505867 A-AG
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        6297 3 -     53940 A-TA
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18014263 3 -  38779656 A-TA
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Pan_paniscus.CM003386.1                               127579686 3 - 205426864 A-AG
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120156846 3 - 196562556 A-AG
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  41894 3 +    295523 A-AG
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3645710 3 +  18214204 a-ag
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5035347 3 -   6340057 a-ag
i Panthera_tigris.KE721879.1                            C 0 C 0
s Papio_anubis.CM001492.2                               188161586 3 - 188283584 A-AG
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              4676 3 +     25005 A-AG
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47518958 3 +  47705337 A-AG
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 72949 3 -    104429 A-AG
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   11481 3 +     14967 A-AG
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 7346 3 -      7628 A-AG
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    123371 1 -    135482 A---
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          11959 3 -     23713 A-AA
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           13110 3 +     61070 A-AA
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       3404 3 +     49596 A-GA
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615458.1                       2840488 3 -   3366660 A-Ag
i Peromyscus_maniculatus.KI615458.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    18115 3 -     36578 A-AA
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              4932 3 +      8220 A-AG
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Piliocolobus_badius.k141_1987485                           5144 3 -      5908 A-AG
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       5763 3 -     17985 A-AG
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            5130 3 +      7694 A-AG
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26743613 3 +  26888534 A-AG
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990          11414 3 +     21690 A-AG
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       27251 3 +     44506 A-AG
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        27464 3 +     67491 A-AG
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      17703 3 -     98129 A-AG
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     27304 3 +    147771 A-AG
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         3939 3 -     43940 A-AG
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          8022 3 -     55515 A-AG
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         27376 3 +    152463 A-AG
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       5183 3 -    119457 A-AG
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         17098 3 +    134592 A-AG
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          27686 3 -     75465 A-AG
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              192317 3 -    373494 A-AG
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19812965 3 +  19899266 A-AA
i Pongo_pygmaeus.ctg62                                  C 0 I 1
s Presbytis_comata.k141_672698                               8886 3 -     15069 A-AG
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              9001 3 +     14865 A-AG
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                5297 3 -      9567 A-AG
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6853913 3 +  12164890 A-AG
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     22721 3 -     30946 A-AG
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         9021 3 +     11805 A-AG
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           48355 3 +     52369 A-AG
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         40742 3 -     44753 A-AG
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            22665 3 +     27322 A-AG
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       22310 3 -     53241 A-AG
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         44573 3 -     48185 A-AG
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           40300 3 +     77221 A-AG
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        252263 3 -    344369 A-AG
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13248930 3 -  17261082 A-AG
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             606880 3 -   3946241 A-AG
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131542041 3 - 161321710 a-ag
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             32992 3 +     56732 A-AG
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6809489 3 +   6970761 A-AG
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             8878 3 +     18040 A-AG
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                22820 3 +     68503 A-AG
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13920691 3 +  90463843 A-AG
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1794757 3 +   2252614 A-AG
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                            3257 3 -     17045 A-AG
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206380744 3 - 206558726 A-AG
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44859647 3 -  45163003 A-AG
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                22275 3 +    109198 A-AG
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15677700 3 -  43202129 A-AG
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        9614 3 +     34089 A-AG
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              9553 3 -     60842 A-AG
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              9647 3 +     67014 A-AG
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              9624 3 +     60816 A-AG
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 9561 3 -     76454 A-AG
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17346331 3 -  30362882 A-AG
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         25652 3 -     62485 A-AG
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   41542 3 -    114521 A-GT
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        6493 3 +     15331 A-AG
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      11868 3 +     20762 A-AG
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         121872 3 +    130994 A-AG
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           40652 3 +     46263 A-AG
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     33797 3 +     42640 A-AG
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        16819 3 +     30600 A-AG
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  106852 3 -    120886 A-GG
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            26198 3 +    739146 A-AA
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17776532 3 -  27805282 A-AA
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2245210 3 +   2842873 A-Ag
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             241040 3 -    276980 A-AG
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            35240 3 +     62062 A-AG
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189277237 3 + 218635234 A-AG
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        19997 3 -  13920577 A-AG
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               18475 3 +     45698 A-AG
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      812829 3 +   1148477 G-AG
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  63471 3 +     99546 G-AG
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194013119 3 - 194193292 A-AG
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                  1658 3 -      3104 A-AG
i Tolypeutes_matacus.TolMat_scaffold_475685             C 0 C 0
s Trachypithecus_auratus.k141_738098                        30140 3 +     38948 A-AG
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   23700 3 -     32910 A-AG
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      5601 3 -     12939 A-AG
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       5029 3 -     14244 A-AG
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           46422 3 -     54611 A-AG
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        4223 3 -     11566 A-AG
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     6407 3 -     15592 A-AG
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          5059 3 +     14371 A-AG
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   3345 3 +     12481 A-AG
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        3326 3 -     24393 A-AG
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       8470 3 -     28054 A-AG
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44663254 3 -  44834318 A-AG
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       5566 3 +     13828 A-AG
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                  10973 3 +     90398 A-GG
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16091007 3 +  31416278 G-AA
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2802254 3 -   3938065 A-AG
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                   11082 3 +     13056 A-AG
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69319199 3 -  96451834 a-aa
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                    1932 3 +    136657 A-GA
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 C 0
s Ursus_maritimus.KK498671.1                              6522690 3 +  28682327 A-AG
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                 10586 3 -     20643 A-AG
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             30121 3 -     33872 A-AC
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1530231 3 -   2331223 A-AG
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                146359 3 -    281493 A-AG
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       132705 3 -    134049 G-AG
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_202118                     2321 3 -      3360 A-AG
i Zapus_hudsonius.ZapHud_scaffold_202118                C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            3791 2 -     13665 --AG
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Eptesicus_fuscus.JH977687.1                             4710851 0 +   6522550 C
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Zalophus_californianus.ZalCal_flattened_line_4097        221654 0 -    227762 C
e Tonatia_saurophila.TonSau_scaffold_3334                  140002 0 -    259118 C
e Tadarida_brasiliensis.TadBra_scaffold_61492                4259 0 +     20549 C
e Saiga_tatarica.SaiTat_scaffold_371890                      3508 3 -      4338 I
e Pteronotus_parnellii.KE867983.1                            7995 0 -     27784 C
e Pipistrellus_pipistrellus.PipPip_scaffold_3306           101415 0 +    112873 C
e Pantholops_hodgsonii.KE114631.1                         1074091 3 -   1292953 I
e Ovis_canadensis.OviCan_scaffold_6251                      86466 1 +    140051 I
e Ovis_aries.CM001582.2                                 134085216 5 - 275406953 I
e Odobenus_rosmarus.KB229369.1                             686793 0 -   3126709 C
e Noctilio_leporinus.NocLep_scaffold_12062                  52626 31 +     94413 I
e Myotis_myotis.MyoMyo_scaffold_6123                        15918 0 +     66751 C
e Myotis_lucifugus.GL429887.1                             3470691 0 -   3747815 C
e Myotis_davidii.KB114863.1                               5024262 0 +   6462685 C
e Myotis_brandtii.KE161952.1                               973184 0 +   8389877 C
e Murina_feae.MurFea_scaffold_2254                          26170 0 -    100666 C
e Mormoops_blainvillei.MorMeg_scaffold_2952                165343 0 +    265003 C
e Miniopterus_schreibersii.MinSch_scaffold_24116            39640 0 +     45743 C
e Miniopterus_natalensis.LDJU01000022.1                   8215181 0 +  10048721 C
e Micronycteris_hirsuta.MicHir_scaffold_37978               26828 0 -     32043 C
e Lasiurus_borealis.LasBor_scaffold_59542                    7402 0 +     26176 C
e Hemitragus_hylocrius.HemHyl_scaffold_16669                35434 5 -     91191 I
e Desmodus_rotundus.KZ672188.1                           18703091 0 -  18957592 C
e Carollia_perspicillata.CarPer_scaffold_4436               63873 0 +     67245 C
e Capra_hircus.CM004562.1                               135714405 1 - 157403528 I
e Capra_aegagrus.CM003214.1                              21336052 1 + 157394656 I
e Beatragus_hunteri.BeaHun_scaffold_21644                   50601 0 -     72089 C
e Artibeus_jamaicensis.ArtJam_scaffold_41619                12877 0 -     29036 C
e Anoura_caudifer.AnoCau_scaffold_422                      394587 0 -    631301 C
e Ammotragus_lervia.NIVO01013474.1                        3528619 1 +   4113121 I
e Hylobates_pileatus_a.tarseq_592                             37267 2881 -     60944 I
e Tarsius_wallacei.k141_48636                               64696 0 +     65473 C
e Tarsius_lariang.k141_609102                               31387 0 +     42269 C
e Pithecia_vanzolinii.k141_831006                           15424 0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514 0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521 0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292 0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093 0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038 0 +     78826 C
e Pithecia_albicans.k141_991845                             45662 0 -     61926 C
e Cephalopachus_bancanus.k141_702587                        12545 0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530 0 +    345090 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               18713  2 +    209709 C-----------------------A
s Acinonyx_jubatus.LLWD01000356.1                         2041559  2 +   3721120 N-----------------------N
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    119201  2 -    189883 C-----------------------A
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10665426  2 +  23371972 C-----------------------A
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7102375  2 -  16596857 C-----------------------A
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_141108                   2554  2 -      7259 C-----------------------A
i Allactaga_bullata.AllBul_scaffold_141108              C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   6599  2 -     60446 C-----------------------A
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         7313  2 -     29318 C-----------------------A
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         6251  2 +     38766 C-----------------------A
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          7209  2 -     80423 C-----------------------A
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              2157  2 +     19852 C-----------------------A
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                4377  2 -     12443 C-----------------------A
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                             1700  2 +      5070 C-----------------------A
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                 1447  2 -      1641 C-----------------------A
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          4186  2 -     24210 C-----------------------A
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_494922                              690  2 -      8325 C-----------------------A
i Alouatta_nigerrima.k141_494922                        C 0 C 0
s Alouatta_palliata.k141_405616                              6604  2 +     16794 C-----------------------A
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_347198                              633  2 +      9111 C-----------------------A
i Alouatta_puruensis.k141_347198                        C 0 C 0
s Alouatta_seniculus.k141_790278                             5881  2 -      9835 C-----------------------A
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             5792  2 +     55446 t-----------------------a
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 I 54
s Aotus_azarae.k141_3170768                                 67491  2 +     78111 C-----------------------A
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                           10435  2 +     22701 C-----------------------A
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5754401  2 +   9889416 C-----------------------A
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                            10979  2 -    104377 C-----------------------A
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                              11008  2 +     23246 C-----------------------A
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     3638  2 +     11424 C-----------------------A
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        7581  2 +      9265 A-----------------------C
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9544291  2 +  39197703 C-----------------------A
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             65565  2 +     85812 C-----------------------A
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                16575  2 +     89302 C-----------------------A
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             21079  2 -     58268 C-----------------------A
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             69073  2 +    119057 C-----------------------A
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              11042  2 -     25888 C-----------------------A
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                12116  2 -     16375 A-----------------------C
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               5732  2 +      6337 A-----------------------C
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26386018  2 +  51448160 T-----------------------A
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                       11191  2 -     13118 T-----------------------A
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   50601  1 -     72089 ------------------------A
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 I 10
s Bison_bison.KN264915.1                                   305552  1 -   6870073 T------------------------
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22959658  1 + 161108492 T------------------------
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     421837  1 +    998990 T------------------------
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22668310  1 + 158972876 T------------------------
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               677148  2 +   1914593 t-----------------------a
i Bubalus_bubalis.KI419065.1                            C 0 I 10
s Cacajao_ayresi.k141_724503                               118911  2 -    171031 C-----------------------A
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 17931  2 +    125063 G-----------------------A
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                19978  2 -    216513 C-----------------------A
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       12521  2 -    134917 C-----------------------A
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3225126  2 -   8989139 T-----------------------A
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           402826  2 -  15254737 T-----------------------A
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2978564  2 +   6889770 T-----------------------A
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11528278  2 +  39901454 C-----------------------A
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   23252  2 +     87036 C-----------------------A
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11275175  2 -  35597290 C-----------------------A
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11097672  2 +  39895921 T-----------------------A
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16464457  2 -  44759192 C-----------------------A
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capromys_pilorides.CapPil_scaffold_1011243                  337  2 +      1208 c-----------------------a
i Capromys_pilorides.CapPil_scaffold_1011243            C 0 C 0
s Castor_canadensis.CasCan_scaffold_1326                     1125  2 -    202837 C-----------------------A
i Castor_canadensis.CasCan_scaffold_1326                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   164865  2 -    276539 T-----------------------G
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15790864  2 -  24422027 C-----------------------A
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15802809  2 -  24440124 C-----------------------A
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       180981  2 +    436027 C-----------------------A
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18896646  2 -  29618158 C-----------------------G
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                13296  2 -     26817 C-----------------------G
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                17540  2 +     25043 C-----------------------G
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4370099  2 +   7569818 C-----------------------A
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_171732          256  2 +      8380 C-----------------------A
i Ceratotherium_simum_cottoni.CerCot_scaffold_171732    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6560539  2 +   6739814 C-----------------------A
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      32016  2 +     60454 C-----------------------A
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          7220  2 -     21101 C-----------------------A
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         64530  2 -    107033 C-----------------------A
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        7390  2 -     17608 C-----------------------A
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          4558  2 +     45019 C-----------------------A
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           4834  2 +     15177 C-----------------------A
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          7440  2 +     16677 C-----------------------A
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           29636  2 +     35983 C-----------------------A
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11996161  2 +  12117833 C-----------------------A
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46483143  2 +  46592721 C-----------------------A
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                       1254  2 -     27215 C-----------------------A
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       7454  2 +     35577 C-----------------------A
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        7248  2 -     25661 C-----------------------A
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        7420  2 -     17744 C-----------------------A
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        26789  2 +     37128 C-----------------------A
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           5811  2 -      6963 T-----------------------A
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           64332  2 -     68416 A-----------------------C
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_854352                             634  2 +     27737 A-----------------------C
i Cheirogaleus_medius.k141_854352                       C 0 C 0
s Cheracebus_lucifer.k141_619653                            10602  2 -     18223 C-----------------------A
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              2343  2 +    188999 C-----------------------A
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           46642  2 +     57117 C-----------------------A
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          51322  2 +     54541 C-----------------------A
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15965489  2 +  43084221 c-----------------------a
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         76123  2 +    196370 C-----------------------A
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          20304  2 +     40510 C-----------------------A
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15144974  2 -  15256731 C-----------------------A
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      39438  2 -     53260 C-----------------------A
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101149997  2 + 101219884 C-----------------------A
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                19839  2 -     21363 C-----------------------A
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           765143  2 +    964067 C-----------------------A
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_304221              2760  2 -      7053 c-----------------------a
i Chrysochloris_asiatica.ChrAsi_scaffold_304221         I 2344 C 0
s Colobus_angolensis.KN985967.1                          10889768  2 +  10971483 C-----------------------A
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147667696  2 + 156195979 C-----------------------A
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            19679  2 +     23629 C-----------------------A
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60624116  1 +  78930452 ------------------------A
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         4512  2 -      5782 C-----------------------A
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 284106  2 -    399297 C-----------------------A
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53036392  2 +  72327488 C-----------------------A
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              3999  2 -     22648 C-----------------------A
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            59495  2 -     70449 C-----------------------A
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  216239  2 -    956709 C-----------------------A
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 37211  2 -     67205 c-----------------------a
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                22058  2 +     26546 C-----------------------A
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             63202  2 -    236241 C-----------------------A
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          186860  2 -   6883506 C-----------------------A
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16850278  2 +  31942871 A-----------------------C
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80042610  2 -  96802777 t-----------------------a
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 328498  2 +    993696 C-----------------------A
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   9132  2 +    151128 C-----------------------A
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   160964  2 +    228994 C-----------------------A
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3661413  2 +   4240102 T-----------------------A
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  3787  2 -     11986 T-----------------------A
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                41767  2 -     73477 C-----------------------A
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           23005031  2 -  44670279 A-----------------------A
i Echinops_telfairi.JH980316.1                          I 2412 C 0
s Eidolon_helvum.KE772537.1                                 15222  2 +     24177 C-----------------------A
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1498544  2 +   1727528 t-----------------------a
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 I 22
s Elephantulus_edwardii.JH947210.1                        7836550  2 +  15467074 C-----------------------A
i Elephantulus_edwardii.JH947210.1                      I 973 C 0
s Ellobius_lutescens.LOEQ01003611.1                        245102  2 -    369425 C-----------------------A
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01076532.1                           1454  2 +      9159 C-----------------------A
i Ellobius_talpinus.LOJH01076532.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85879422  2 +  99434291 C-----------------------A
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Equus_asinus.JREZ01000062.1                             5858361  2 -   7175178 C-----------------------A
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13356847  2 +  41866177 C-----------------------A
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          18337  2 +     92910 C-----------------------A
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11543510  2 +  16010500 c-----------------------a
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48782007  2 -  48907691 C-----------------------A
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          320861  2 +    330699 T-----------------------A
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             67317  2 +     89355 T-----------------------A
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                             10396  2 +     13586 A-----------------------C
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_1015201                              3655  2 -      4292 A-----------------------C
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            16792  2 +     36558 A-----------------------C
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            13114  2 +     60246 A-----------------------C
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                16599  2 +    109717 A-----------------------C
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 4582  2 -     19505 A-----------------------C
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                21257  2 +     27497 A-----------------------C
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           23713  2 +     26808 A-----------------------C
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                38445  2 +     46535 A-----------------------C
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              21186  2 -     29447 A-----------------------C
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129901132  2 - 159252932 t-----------------------a
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129288109  2 - 158578461 t-----------------------a
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 29299  2 +     52776 T-----------------------A
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13897435  2 -  19261668 C-----------------------A
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     216439  2 -    847004 T-----------------------C
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           18801  2 -     43889 T-----------------------C
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          15942  2 +     27357 A-----------------------C
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               160719  2 +    324696 C-----------------------A
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    188312  2 -    189561 t-----------------------a
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 I 28
s Glis_glis.GliGli_scaffold_79770                           17630  2 -     18683 C-----------------------A
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                              10410  2 -     14630 C-----------------------A
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119657510  2 - 195582420 C-----------------------A
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   80948  2 +    118900 C-----------------------A
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         7186  2 +     10286 A-----------------------C
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             5667  2 -     11661 A-----------------------C
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                            10991  2 +     56096 A-----------------------C
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        34240  2 -     42470 A-----------------------C
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        50866  2 -     54384 A-----------------------C
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              24613  2 +     53719 C-----------------------A
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2561765  2 +  31725842 c-----------------------a
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               64196  2 +     73687 C-----------------------A
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              152661 25 +    277961 TGTATATATACATATAATATATATA
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      285708  2 -    477199 c-----------------------a
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959               3393  2 +     26078 t-----------------------a
i Hipposideros_galeritus.HipGal_scaffold_52959          C 0 C 0
s Hoolock_leuconedys.ctg79                                     10335  2 -   7690867 C-----------------------A
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 25049  2 -     67322 C-----------------------A
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           22411  2 -    119109 C-----------------------A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_1816750                             2906  2 +      3202 C-----------------------A
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1136966                               915  2 +      9785 C-----------------------A
i Hylobates_agilis.k141_1136966                         C 0 C 0
s Hylobates_klossii.k141_468230                              4395  2 +      5464 C-----------------------A
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14629741  2 -  25970782 C-----------------------A
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            2293  2 +      4161 C-----------------------A
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                    10676  2 +     22540 C-----------------------A
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7131512  2 +  13083262 c-----------------------a
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   2728  2 +      3484 A-----------------------C
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              14840  2 +     17520 T-----------------------A
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8580302  2 +  11848649 C-----------------------A
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               29457  2 +     37189 T-----------------------A
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          55163  2 -    147782 C-----------------------A
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lemur_catta.scaffold_1                                258412544  2 - 285822530 A-----------------------C
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        29872  2 +     39228 A-----------------------C
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            59236  2 +     63517 A-----------------------C
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        37618  2 -     38897 A-----------------------C
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      3662  2 -     13103 A-----------------------C
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3093370  2 -   3498232 C-----------------------A
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    22148  2 +     22452 C-----------------------A
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            141767  2 +   3060487 T-----------------------A
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19253628  2 +  19376315 T-----------------------A
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           16402  2 +     84689 A-----------------------C
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3784135  2 +   6799190 A-----------------------C
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20599936  2 -  62548349 C-----------------------A
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11097128  2 +  39895028 C-----------------------A
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             25377  2 +     74745 C-----------------------A
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12711840  2 +  12821369 C-----------------------A
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                4413  2 -     26467 C-----------------------A
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           52284  2 +     63263 C-----------------------A
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 4394  2 -     26361 C-----------------------A
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_2667654                                 697  2 -      5626 C-----------------------A
i Macaca_leonina.k141_2667654                           C 0 C 0
s Macaca_maura.k141_251854                                  50813  2 -     79256 C-----------------------A
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196040911  2 + 196197964 C-----------------------A
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11451081  2 +  11645122 C-----------------------A
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   9767  2 -     46448 C-----------------------A
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                7428  2 -     13212 C-----------------------A
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 21110  2 -     55006 C-----------------------A
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43846532  2 +  43892939 C-----------------------A
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               22394  2 -     24607 C-----------------------A
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               9764  2 -     27140 C-----------------------A
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                703833  2 +    802869 C-----------------------A
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43442797  2 -  43563597 C-----------------------A
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4455596  2 -   4543643 C-----------------------A
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            154118  2 +    252755 C-----------------------A
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             41716  2 +     58827 C-----------------------A
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36879378  2 +  64221397 c-----------------------a
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       67630  2 -    234502 C-----------------------A
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             8517  2 -     87323 C-----------------------A
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 3327  2 +    115071 C-----------------------A
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1052966  2 -  26018355 C-----------------------A
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    4428  2 -     12939 T-----------------------A
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16515596  1 +  47401472 A------------------------
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  46646  2 -     48017 A-----------------------A
i Microgale_talazaci.MicTal_scaffold_34660              I 2401 C 0
s Microtus_ochrogaster.CM001673.1                        22825938  2 -  98408828 C-----------------------A
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         7346  2 +     29742 C-----------------------A
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        18866  2 -    104932 C-----------------------A
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     6291  1 -     12809 A------------------------
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 152203  2 +    154973 T-----------------------A
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  9003  2 -     19904 T-----------------------A
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 I 10
s Mungos_mungo.MunMun_flattened_line_8729                  152342  2 -    168139 C-----------------------A
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Mus_caroli.LT608236.1                                  70773208  2 +  92629107 C-----------------------A
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75495272  2 +  98207768 C-----------------------A
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67561999  2 +  89017189 C-----------------------C
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74337980  2 +  97876770 C-----------------------A
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             16015  2 +     98495 C-----------------------A
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4430620  2 -  28371801 C-----------------------A
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     96970  2 -    117718 c-----------------------a
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_12795               209  2 -     87886 t-----------------------a
i Myrmecophaga_tridactyla.MyrTri_scaffold_12795         I 3 C 0
s Nannospalax_galili.KL201303.1                            125683  2 +    362372 C-----------------------T
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                              11607  2 +     48152 C-----------------------A
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4492257  2 -  14209539 C-----------------------A
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3956794  2 -   4490290 t-----------------------a
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Nomascus_annamensis.k141_762468                            1412  2 -      2755 C-----------------------A
i Nomascus_annamensis.k141_762468                       C 0 C 0
s Nomascus_concolor.k141_256540                              8022  2 -      8966 C-----------------------A
i Nomascus_concolor.k141_256540                         C 0 C 0
s Nomascus_gabriellae.k141_1400361                           1963  2 -      2203 C-----------------------A
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_453                             7275  2 +     12787 C-----------------------A
i Nomascus_siki_b.tarseq_453                        C 0 C 0
s Nomascus_siki_a.k141_421408                                  1877  2 +     16235 G-----------------------A
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                39998  2 +   3668941 C-----------------------A
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65573177  2 -  95554990 A-----------------------C
i Nycticebus_bengalensis.LG16                           I 3 C 0
s Nycticebus_coucang.k141_6040852                             813  2 +      1868 A-----------------------C
i Nycticebus_coucang.k141_6040852                       I 3 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65681356  2 +  89412551 A-----------------------C
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     I 3 C 0
s Ochotona_princeps.JH802095.1                            5001205  2 -  23139505 C-----------------------A
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3692285  2 +  10294119 c-----------------------a
i Octodon_degus.JH651621.1                              C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1085975  2 +   1425656 t-----------------------a
i Odocoileus_virginianus.KZ101650.1                     C 0 I 22
s Okapia_johnstoni.LVCL01S0017931.1                         44032 12 +     78940 t-------------gtatacacaca
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 I 28
s Ondatra_zibethicus.OndZib_scaffold_6821                  131744  2 +    145789 C-----------------------A
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  44678  2 +     62360 T-----------------------C
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7230472  2 -   7562323 t-----------------------a
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_371885              1672  2 +      3658 C-----------------------A
i Orycteropus_afer.OryAfe_flattened_line_371885         N 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141885164  2 + 163896628 C-----------------------A
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      317135  2 -    505867 C-----------------------A
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        6300  2 -     53940 A-----------------------C
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18014266  2 -  38779656 A-----------------------C
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Pan_paniscus.CM003386.1                               127579689  2 - 205426864 C-----------------------A
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120156849  2 - 196562556 C-----------------------A
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  41897  2 +    295523 T-----------------------A
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3645713  2 +  18214204 t-----------------------a
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5035350  2 -   6340057 t-----------------------a
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1074094  2 -   1292953 t-----------------------a
i Pantholops_hodgsonii.KE114631.1                       I 3 I 10
s Papio_anubis.CM001492.2                               188161589  2 - 188283584 C-----------------------A
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              4679  2 +     25005 C-----------------------A
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47518961  2 +  47705337 C-----------------------A
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 72952  2 -    104429 C-----------------------A
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   11484  2 +     14967 C-----------------------A
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 7349  2 -      7628 C-----------------------A
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    123372  2 -    135482 C-----------------------A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          11962  2 -     23713 G-----------------------C
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           13113  2 +     61070 G-----------------------C
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       3407  2 +     49596 C-----------------------A
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615458.1                       2840491  2 -   3366660 t-----------------------c
i Peromyscus_maniculatus.KI615458.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    18118  2 -     36578 C-----------------------A
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              4935  2 +      8220 T-----------------------A
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Piliocolobus_badius.k141_1987485                           5147  2 -      5908 C-----------------------A
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       5766  2 -     17985 C-----------------------A
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            5133  2 +      7694 C-----------------------A
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26743616  2 +  26888534 C-----------------------A
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990          11417  2 +     21690 T-----------------------A
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       27254  2 +     44506 C-----------------------A
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        27467  2 +     67491 C-----------------------A
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      17706  2 -     98129 C-----------------------A
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     27307  2 +    147771 C-----------------------A
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         3942  2 -     43940 C-----------------------A
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          8025  2 -     55515 C-----------------------A
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         27379  2 +    152463 C-----------------------A
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       5186  2 -    119457 C-----------------------A
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         17101  2 +    134592 C-----------------------A
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          27689  2 -     75465 C-----------------------A
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              192320  2 -    373494 C-----------------------A
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19812969  2 +  19899266 C-----------------------A
i Pongo_pygmaeus.ctg62                                  I 1 C 0
s Presbytis_comata.k141_672698                               8889  2 -     15069 C-----------------------A
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              9004  2 +     14865 C-----------------------A
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                5300  2 -      9567 C-----------------------A
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6853916  2 +  12164890 A-----------------------C
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     22724  2 -     30946 A-----------------------C
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         9024  2 +     11805 A-----------------------C
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           48358  2 +     52369 A-----------------------C
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         40745  2 -     44753 A-----------------------C
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            22668  2 +     27322 A-----------------------C
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       22313  2 -     53241 A-----------------------C
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         44576  2 -     48185 A-----------------------C
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           40303  2 +     77221 C-----------------------A
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        252266  2 -    344369 C-----------------------A
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13248933  2 -  17261082 C-----------------------A
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             606883  2 -   3946241 C-----------------------A
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131542044  2 - 161321710 t-----------------------a
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             32995  2 +     56732 C-----------------------A
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6809492  2 +   6970761 C-----------------------A
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             8881  2 +     18040 C-----------------------A
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                22823  2 +     68503 T-----------------------A
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 I 22
s Rattus_norvegicus.chr11                                13920694  2 +  90463843 T-----------------------C
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1794760  2 +   2252614 C-----------------------A
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                            3260  2 -     17045 C-----------------------A
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206380747  2 - 206558726 C-----------------------A
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44859650  2 -  45163003 C-----------------------A
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                22278  2 +    109198 C-----------------------A
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                      3511  2 -      4338 t-----------------------a
i Saiga_tatarica.SaiTat_scaffold_371890                 I 3 I 10
s Saimiri_boliviensis.NW_024100938.1                     15677703  2 -  43202129 T-----------------------A
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        9617  2 +     34089 T-----------------------A
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              9556  2 -     60842 T-----------------------A
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              9650  2 +     67014 T-----------------------A
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              9627  2 +     60816 T-----------------------A
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 9564  2 -     76454 T-----------------------A
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17346334  2 -  30362882 C-----------------------A
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         25655  2 -     62485 C-----------------------A
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   41545  1 -    114521 ------------------------A
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        6496  2 +     15331 C-----------------------A
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      11871  2 +     20762 C-----------------------A
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         121875  2 +    130994 C-----------------------A
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           40655  2 +     46263 C-----------------------A
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     33800  2 +     42640 C-----------------------A
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        16822  2 +     30600 C-----------------------A
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  106855  2 -    120886 T-----------------------A
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            26201  2 +    739146 C-----------------------A
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17776535  2 -  27805282 C-----------------------A
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2245213  2 +   2842873 c-----------------------a
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             241043  2 -    276980 C-----------------------A
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            35243  2 +     62062 C-----------------------A
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189277240  2 + 218635234 T-----------------------G
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        20000  2 -  13920577 C-----------------------A
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               18478  2 +     45698 T-----------------------A
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      812832  2 +   1148477 C-----------------------A
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  63474  2 +     99546 C-----------------------A
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194013122  2 - 194193292 C-----------------------A
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                  1661  2 -      3104 T-----------------------A
i Tolypeutes_matacus.TolMat_scaffold_475685             C 0 C 0
s Trachypithecus_auratus.k141_738098                        30143  2 +     38948 C-----------------------A
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   23703  2 -     32910 C-----------------------A
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      5604  2 -     12939 C-----------------------A
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       5032  2 -     14244 C-----------------------A
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           46425  2 -     54611 C-----------------------A
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        4226  2 -     11566 C-----------------------A
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     6410  2 -     15592 C-----------------------A
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          5062  2 +     14371 C-----------------------A
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   3348  2 +     12481 C-----------------------A
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        3329  2 -     24393 C-----------------------A
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       8473  2 -     28054 C-----------------------A
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44663257  2 -  44834318 C-----------------------A
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       5569  2 +     13828 C-----------------------A
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                  10976  2 +     90398 T-----------------------G
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 I 42
s Trichechus_manatus.JH594618.1                          16091010  2 +  31416278 C-----------------------A
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2802257  2 -   3938065 C-----------------------A
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                   11085  2 +     13056 C-----------------------A
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69319202  2 -  96451834 t-----------------------a
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                    1935  1 +    136657 ------------------------C
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 C 0
s Ursus_maritimus.KK498671.1                              6522693  2 +  28682327 C-----------------------A
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                 10589  2 -     20643 A-----------------------C
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             30124  2 -     33872 A-----------------------C
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1530234  2 -   2331223 T-----------------------A
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                146362  2 -    281493 C-----------------------A
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       132708  2 -    134049 C-----------------------A
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_202118                     2324  2 -      3360 C-----------------------A
i Zapus_hudsonius.ZapHud_scaffold_202118                C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            3793  2 -     13665 T-----------------------A
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Eptesicus_fuscus.JH977687.1                             4710851  0 +   6522550 C
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Zalophus_californianus.ZalCal_flattened_line_4097        221654  0 -    227762 C
e Tonatia_saurophila.TonSau_scaffold_3334                  140002  0 -    259118 C
e Tadarida_brasiliensis.TadBra_scaffold_61492                4259  0 +     20549 C
e Pteronotus_parnellii.KE867983.1                            7995  0 -     27784 C
e Pipistrellus_pipistrellus.PipPip_scaffold_3306           101415  0 +    112873 C
e Ovis_canadensis.OviCan_scaffold_6251                      86466  1 +    140051 I
e Ovis_aries.CM001582.2                                 134085216  5 - 275406953 I
e Odobenus_rosmarus.KB229369.1                             686793  0 -   3126709 C
e Noctilio_leporinus.NocLep_scaffold_12062                  52626 31 +     94413 I
e Myotis_myotis.MyoMyo_scaffold_6123                        15918  0 +     66751 C
e Myotis_lucifugus.GL429887.1                             3470691  0 -   3747815 C
e Myotis_davidii.KB114863.1                               5024262  0 +   6462685 C
e Myotis_brandtii.KE161952.1                               973184  0 +   8389877 C
e Murina_feae.MurFea_scaffold_2254                          26170  0 -    100666 C
e Mormoops_blainvillei.MorMeg_scaffold_2952                165343  0 +    265003 C
e Miniopterus_schreibersii.MinSch_scaffold_24116            39640  0 +     45743 C
e Miniopterus_natalensis.LDJU01000022.1                   8215181  0 +  10048721 C
e Micronycteris_hirsuta.MicHir_scaffold_37978               26828  0 -     32043 C
e Lasiurus_borealis.LasBor_scaffold_59542                    7402  0 +     26176 C
e Hemitragus_hylocrius.HemHyl_scaffold_16669                35434  5 -     91191 I
e Desmodus_rotundus.KZ672188.1                           18703091  0 -  18957592 C
e Carollia_perspicillata.CarPer_scaffold_4436               63873  0 +     67245 C
e Capra_hircus.CM004562.1                               135714405  1 - 157403528 I
e Capra_aegagrus.CM003214.1                              21336052  1 + 157394656 I
e Artibeus_jamaicensis.ArtJam_scaffold_41619                12877  0 -     29036 C
e Anoura_caudifer.AnoCau_scaffold_422                      394587  0 -    631301 C
e Ammotragus_lervia.NIVO01013474.1                        3528619  1 +   4113121 I
e Hylobates_pileatus_a.tarseq_592                             37267 2881 -     60944 I
e Tarsius_wallacei.k141_48636                               64696  0 +     65473 C
e Tarsius_lariang.k141_609102                               31387  0 +     42269 C
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Cephalopachus_bancanus.k141_702587                        12545  0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530  0 +    345090 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               18715  3 +    209709 TA-----------------------G
s Acinonyx_jubatus.LLWD01000356.1                         2041561  3 +   3721120 NN-----------------------N
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    119203  3 -    189883 CA-----------------------A
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10665428  3 +  23371972 TA-----------------------T
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7102377  3 -  16596857 TA-----------------------T
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_141108                   2556  3 -      7259 CA-----------------------A
i Allactaga_bullata.AllBul_scaffold_141108              C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   6601  3 -     60446 TA-----------------------G
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         7315  3 -     29318 TA-----------------------G
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         6253  3 +     38766 TA-----------------------G
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          7211  3 -     80423 TA-----------------------G
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              2159  3 +     19852 TA-----------------------A
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                4379  3 -     12443 TA-----------------------A
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                             1702  3 +      5070 TA-----------------------A
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                 1449  3 -      1641 TA-----------------------A
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          4188  3 -     24210 TA-----------------------A
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_494922                              692  3 -      8325 TA-----------------------A
i Alouatta_nigerrima.k141_494922                        C 0 C 0
s Alouatta_palliata.k141_405616                              6606  3 +     16794 TA-----------------------A
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_347198                              635  3 +      9111 TA-----------------------A
i Alouatta_puruensis.k141_347198                        C 0 C 0
s Alouatta_seniculus.k141_790278                             5883  3 -      9835 TA-----------------------A
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3528620  3 +   4113121 TA-----------------------T
i Ammotragus_lervia.NIVO01013474.1                      I 1 I 2
s Antilocapra_americana.AntAmePen_scaffold_27338             5848  3 +     55446 ta-----------------------t
i Antilocapra_americana.AntAmePen_scaffold_27338        I 54 I 2
s Aotus_azarae.k141_3170768                                 67493  3 +     78111 TC-----------------------A
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                           10437  3 +     22701 TA-----------------------A
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5754403  3 +   9889416 TA-----------------------A
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                            10981  3 -    104377 TC-----------------------A
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                              11010  3 +     23246 TC-----------------------A
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     3640  3 +     11424 TA-----------------------A
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        7583  3 +      9265 TA-----------------------G
i Arctocebus_calabarensis.k141_587554                   C 0 I 9
s Ateles_geoffroyi_b.tarseq_2582                             9544293  3 +  39197703 TA-----------------------A
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             65567  3 +     85812 TA-----------------------A
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                16577  3 +     89302 TA-----------------------A
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             21081  3 -     58268 TA-----------------------A
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             69075  3 +    119057 TA-----------------------A
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              11044  3 -     25888 TA-----------------------A
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                12118  3 -     16375 TA-----------------------G
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               5734  3 +      6337 TA-----------------------G
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26386020  3 +  51448160 TA-----------------------T
i Balaenoptera_acutorostrata.KI537095.1                 C 0 I 2
s Balaenoptera_bonaerensis.DF502048.1                       11193  3 -     13118 TA-----------------------T
i Balaenoptera_bonaerensis.DF502048.1                   C 0 I 2
s Beatragus_hunteri.BeaHun_scaffold_21644                   50612  3 -     72089 TA-----------------------T
i Beatragus_hunteri.BeaHun_scaffold_21644               I 10 I 2
s Bubalus_bubalis.KI419065.1                               677160  3 +   1914593 ta-----------------------t
i Bubalus_bubalis.KI419065.1                            I 10 I 2
s Cacajao_ayresi.k141_724503                               118913  3 -    171031 TA-----------------------A
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 17933  3 +    125063 TA-----------------------A
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                19980  3 -    216513 TA-----------------------A
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       12523  3 -    134917 TA-----------------------A
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3225128  3 -   8989139 TA-----------------------T
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           402828  3 -  15254737 TA-----------------------T
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2978566  3 +   6889770 TA-----------------------T
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11528280  3 +  39901454 TA-----------------------T
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   23254  3 +     87036 TA-----------------------T
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11275177  3 -  35597290 TA-----------------------T
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11097674  3 +  39895921 TA-----------------------T
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16464459  3 -  44759192 TA-----------------------T
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21336053  3 + 157394656 TA-----------------------T
i Capra_aegagrus.CM003214.1                             I 1 I 2
s Capra_hircus.CM004562.1                               135714406  3 - 157403528 TA-----------------------T
i Capra_hircus.CM004562.1                               I 1 I 2
s Capromys_pilorides.CapPil_scaffold_1011243                  339  3 +      1208 ta-----------------------a
i Capromys_pilorides.CapPil_scaffold_1011243            C 0 C 0
s Castor_canadensis.CasCan_scaffold_1326                     1127  3 -    202837 CA-----------------------A
i Castor_canadensis.CasCan_scaffold_1326                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   164867  3 -    276539 TA-----------------------G
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15790866  3 -  24422027 ta-----------------------g
i Cavia_aperea.AVPZ01000278.1                           C 0 I 11
s Cavia_porcellus.DS562889.1                             15802811  3 -  24440124 Ta-----------------------g
i Cavia_porcellus.DS562889.1                            C 0 I 11
s Cavia_tschudii.CavTsc_scaffold_488                       180983  3 +    436027 TA-----------------------G
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 I 11
s Cebus_albifrons.Contig22                               18896648  3 -  29618158 TA-----------------------A
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                13298  3 -     26817 TA-----------------------A
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                17542  3 +     25043 TA-----------------------A
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4370101  3 +   7569818 TG-----------------------T
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_171732          258  3 +      8380 TG-----------------------T
i Ceratotherium_simum_cottoni.CerCot_scaffold_171732    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6560541  3 +   6739814 TA-----------------------G
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      32018  3 +     60454 TA-----------------------G
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          7222  3 -     21101 TA-----------------------G
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         64532  3 -    107033 TA-----------------------G
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        7392  3 -     17608 TA-----------------------G
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          4560  3 +     45019 TA-----------------------G
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           4836  3 +     15177 TA-----------------------G
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          7442  3 +     16677 TA-----------------------G
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           29638  3 +     35983 TA-----------------------G
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11996163  3 +  12117833 TA-----------------------G
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46483145  3 +  46592721 TA-----------------------G
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                       1256  3 -     27215 TA-----------------------G
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       7456  3 +     35577 TA-----------------------G
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        7250  3 -     25661 TA-----------------------G
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        7422  3 -     17744 TA-----------------------G
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        26791  3 +     37128 TA-----------------------G
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           5813  3 -      6963 TA-----------------------T
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           64334  3 -     68416 TA-----------------------G
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_854352                             636  3 +     27737 TA-----------------------G
i Cheirogaleus_medius.k141_854352                       C 0 C 0
s Cheracebus_lucifer.k141_619653                            10604  3 -     18223 TC-----------------------A
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              2345  3 +    188999 TA-----------------------A
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           46644  3 +     57117 TC-----------------------A
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          51324  3 +     54541 TA-----------------------A
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15965491  3 +  43084221 ta-----------------------a
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         76125  3 +    196370 TA-----------------------A
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          20306  3 +     40510 TA-----------------------A
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15144976  3 -  15256731 TA-----------------------G
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      39440  3 -     53260 TA-----------------------G
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101149999  3 + 101219884 TA-----------------------G
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                19841  3 -     21363 TA-----------------------T
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           765145  3 +    964067 TA-----------------------T
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_304221              2762  3 -      7053 CA-----------------------T
i Chrysochloris_asiatica.ChrAsi_scaffold_304221         C 0 I 6
s Colobus_angolensis.KN985967.1                          10889770  3 +  10971483 TA-----------------------G
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147667698  3 + 156195979 TA-----------------------G
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            19681  3 +     23629 TA-----------------------G
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60624117  3 +  78930452 TA-----------------------T
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         4514  3 -      5782 TG-----------------------T
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 284108  3 -    399297 CA-----------------------A
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53036394  3 +  72327488 TA-----------------------A
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              4001  3 -     22648 TA-----------------------T
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            59497  3 -     70449 TA-----------------------T
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  216241  3 -    956709 TA-----------------------A
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 37213  3 -     67205 CA-----------------------A
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                22060  3 +     26546 TA-----------------------A
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             63204  3 -    236241 TA-----------------------A
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          186862  3 -   6883506 GA-----------------------T
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16850280  3 +  31942871 TG-----------------------G
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80042612  3 -  96802777 ta-----------------------t
i Delphinapterus_leucas.KZ290064.1                      C 0 I 6
s Dicerorhinus_sumatrensis.PEKH010003161.1                 328500  3 +    993696 TG-----------------------T
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   9134  3 +    151128 TG-----------------------T
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   160966  3 +    228994 TA-----------------------A
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3661415  3 +   4240102 CA-----------------------A
i Dipodomys_ordii.KN672545.1                            C 0 I 7
s Dipodomys_stephensi.DipSte_scaffold_84338                  3789  3 -     11986 CA-----------------------A
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 I 7
s Dolichotis_patagonum.DolPat_scaffold_14102                41769  3 -     73477 TA-----------------------A
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 I 11
s Echinops_telfairi.JH980316.1                           23005033  3 -  44670279 TA-----------------------T
i Echinops_telfairi.JH980316.1                          C 0 I 4
s Eidolon_helvum.KE772537.1                                 15224  3 +     24177 CA-----------------------T
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1498568  3 +   1727528 ta-----------------------t
i Elaphurus_davidianus.JRFZ01086400.1                   I 22 I 2
s Elephantulus_edwardii.JH947210.1                        7836552  3 +  15467074 TA-----------------------G
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        245104  3 -    369425 CA-----------------------A
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01076532.1                           1456  3 +      9159 CA-----------------------A
i Ellobius_talpinus.LOJH01076532.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85879424  3 +  99434291 TG-----------------------T
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Equus_asinus.JREZ01000062.1                             5858363  3 -   7175178 TA-----------------------T
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13356849  3 +  41866177 TA-----------------------T
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          18339  3 +     92910 TA-----------------------T
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11543512  3 +  16010500 ca-----------------------t
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48782009  3 -  48907691 TA-----------------------G
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          320863  3 +    330699 TA-----------------------T
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 I 2
s Eubalaena_japonica.EubJap_flattened_line_7756             67319  3 +     89355 TA-----------------------T
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 I 2
s Eulemur_albifrons.k141_715837                             10398  3 +     13586 TA-----------------------G
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_1015201                              3657  3 -      4292 TA-----------------------G
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            16794  3 +     36558 TA-----------------------G
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            13116  3 +     60246 TA-----------------------G
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                16601  3 +    109717 TA-----------------------G
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 4584  3 -     19505 TA-----------------------G
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                21259  3 +     27497 TA-----------------------G
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           23715  3 +     26808 TA-----------------------G
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                38447  3 +     46535 TA-----------------------G
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              21188  3 -     29447 TA-----------------------G
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129901134  3 - 159252932 ta-----------------------t
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129288111  3 - 158578461 ta-----------------------t
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 29301  3 +     52776 TA-----------------------T
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13897437  3 -  19261668 TA-----------------------A
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     216441  3 -    847004 TA-----------------------G
i Galago_moholi.ctg555                                  C 0 I 9
s Galago_senegalensis.k141_964197                           18803  3 -     43889 TA-----------------------G
i Galago_senegalensis.k141_964197                       C 0 I 9
s Galagoides_demidoff.k141_1769638                          15944  3 +     27357 TA-----------------------G
i Galagoides_demidoff.k141_1769638                      C 0 I 9
s Galeopterus_variegatus.GalVar_scaffold_354               160721  3 +    324696 TA-----------------------G
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    188342  3 -    189561 ta-----------------------t
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 28 I 2
s Glis_glis.GliGli_scaffold_79770                           17632  3 -     18683 TA-----------------------A
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                              10412  3 -     14630 TA-----------------------G
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119657512  3 - 195582420 TA-----------------------G
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   80950  3 +    118900 TA-----------------------A
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         7188  3 +     10286 TA-----------------------G
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             5669  3 -     11661 TA-----------------------G
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                            10993  3 +     56096 TA-----------------------G
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        34242  3 -     42470 TA-----------------------G
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        50868  3 -     54384 TA-----------------------G
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              24615  3 +     53719 TA-----------------------T
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                35439  3 -     91191 TA-----------------------T
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 5 I 2
s Heterocephalus_glaber.JH602058.1                        2561767  3 +  31725842 ta-----------------------a
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               64198  3 +     73687 TG-----------------------T
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              152686  3 +    277961 TA-----------------------T
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 I 2
s Hipposideros_armiger.JXIK01001085.1                      285710  3 -    477199 ta-----------------------t
i Hipposideros_armiger.JXIK01001085.1                   C 0 I 446
s Hipposideros_galeritus.HipGal_scaffold_52959               3395  3 +     26078 ta-----------------------t
i Hipposideros_galeritus.HipGal_scaffold_52959          C 0 I 34
s Hoolock_leuconedys.ctg79                                     10337  3 -   7690867 TA-----------------------G
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 25051  3 -     67322 TA-----------------------T
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           22413  3 -    119109 TA-----------------------A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 I 9
s Hylobates_abbotti.k141_1816750                             2908  3 +      3202 TA-----------------------G
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1136966                               917  3 +      9785 TA-----------------------G
i Hylobates_agilis.k141_1136966                         C 0 C 0
s Hylobates_klossii.k141_468230                              4397  3 +      5464 TA-----------------------G
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14629743  3 -  25970782 TA-----------------------G
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            2295  3 +      4161 TA-----------------------G
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                    10678  2 +     22540 TA------------------------
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7131514  3 +  13083262 ta-----------------------a
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   2730  3 +      3484 TA-----------------------G
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              14842  3 +     17520 TA-----------------------T
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 I 2
s Jaculus_jaculus.JH725517.1                              8580304  3 +  11848649 CA-----------------------G
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               29459  3 +     37189 TA-----------------------T
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 I 2
s Lagothrix_lagothricha.k141_12968                          55165  3 -    147782 TA-----------------------A
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lemur_catta.scaffold_1                                258412546  3 - 285822530 TA-----------------------G
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        29874  3 +     39228 TA-----------------------G
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            59238  3 +     63517 TA-----------------------C
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        37620  3 -     38897 TA-----------------------G
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      3664  3 -     13103 TA-----------------------G
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3093372  3 -   3498232 TA-----------------------T
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    22150  3 +     22452 TA-----------------------G
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            141769  2 +   3060487 TA------------------------
i Lipotes_vexillifer.KE558548.1                         C 0 I 1
s Lophocebus_aterrimus.ctg55                             19253630  3 +  19376315 TG-----------------------G
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           16404  3 +     84689 TA-----------------------G
i Loris_lydekkerianus.k141_550999                       C 0 I 9
s Loris_tardigradus.ctg97                                 3784137  3 +   6799190 TA-----------------------G
i Loris_tardigradus.ctg97                               C 0 I 9
s Loxodonta_africana.GL010040.1                          20599938  3 -  62548349 TA-----------------------T
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11097130  3 +  39895028 TA-----------------------T
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             25379  3 +     74745 TA-----------------------G
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12711842  3 +  12821369 TA-----------------------G
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                4415  3 -     26467 TA-----------------------G
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           52286  3 +     63263 TA-----------------------G
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 4396  3 -     26361 TA-----------------------G
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_2667654                                 699  3 -      5626 TA-----------------------G
i Macaca_leonina.k141_2667654                           C 0 C 0
s Macaca_maura.k141_251854                                  50815  3 -     79256 TA-----------------------G
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196040913  3 + 196197964 TA-----------------------G
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11451083  3 +  11645122 TA-----------------------G
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   9769  3 -     46448 TA-----------------------G
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                7430  3 -     13212 TA-----------------------G
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 21112  3 -     55006 TA-----------------------G
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43846534  3 +  43892939 TA-----------------------G
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               22396  3 -     24607 TA-----------------------G
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               9766  3 -     27140 TA-----------------------G
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                703835  3 +    802869 CA-----------------------T
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43442799  3 -  43563597 TA-----------------------G
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4455598  3 -   4543643 TA-----------------------G
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            154120  3 +    252755 CA-----------------------T
i Manis_javanica.JSZB01003966.1                         C 0 I 1
s Manis_pentadactyla.KN017078.1                             41718  3 +     58827 CA-----------------------T
i Manis_pentadactyla.KN017078.1                         C 0 I 1
s Marmota_marmota.CZRN01000005.1                         36879380  3 +  64221397 ta-----------------------a
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       67632  3 -    234502 TG-----------------------T
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 I 5
s Mellivora_capensis.MelCap_flattened_line_15433             8519  3 -     87323 TA-----------------------T
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 3329  3 +    115071 CA-----------------------A
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1052968  3 -  26018355 CG-----------------------A
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    4430  3 -     12939 TA-----------------------T
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 I 2
s Microgale_talazaci.MicTal_scaffold_34660                  46648  3 -     48017 TA-----------------------T
i Microgale_talazaci.MicTal_scaffold_34660              C 0 I 4
s Microtus_ochrogaster.CM001673.1                        22825940  3 -  98408828 CA-----------------------A
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         7348  3 +     29742 TA-----------------------G
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        18868  3 -    104932 TA-----------------------T
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 152205  3 +    154973 TA-----------------------T
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 I 6
s Moschus_moschiferus.MosMos_scaffold_78805                  9015  3 -     19904 TA-----------------------T
i Moschus_moschiferus.MosMos_scaffold_78805             I 10 I 2
s Mungos_mungo.MunMun_flattened_line_8729                  152344  3 -    168139 TA-----------------------T
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Mus_caroli.LT608236.1                                  70773210  3 +  92629107 CA-----------------------A
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75495274  3 +  98207768 CA-----------------------A
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67562001  3 +  89017189 CA-----------------------A
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74337982  3 +  97876770 CA-----------------------A
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             16017  3 +     98495 TA-----------------------A
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4430622  3 -  28371801 TG-----------------------T
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     96972  3 -    117718 ta-----------------------a
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_12795               211  3 -     87886 ta-----------------------t
i Myrmecophaga_tridactyla.MyrTri_scaffold_12795         C 0 I 80
s Nannospalax_galili.KL201303.1                            125685  3 +    362372 CA-----------------------A
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                              11609  3 +     48152 TA-----------------------G
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4492259  3 -  14209539 TA-----------------------T
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3956796  3 -   4490290 ta-----------------------t
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 I 6
s Nomascus_annamensis.k141_762468                            1414  3 -      2755 TA-----------------------G
i Nomascus_annamensis.k141_762468                       C 0 C 0
s Nomascus_concolor.k141_256540                              8024  3 -      8966 TA-----------------------G
i Nomascus_concolor.k141_256540                         C 0 C 0
s Nomascus_gabriellae.k141_1400361                           1965  3 -      2203 TA-----------------------G
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_453                             7277  3 +     12787 TA-----------------------G
i Nomascus_siki_b.tarseq_453                        C 0 C 0
s Nomascus_siki_a.k141_421408                                  1879  3 +     16235 TA-----------------------G
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                40000  3 +   3668941 TA-----------------------T
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65573179  3 -  95554990 TA-----------------------G
i Nycticebus_bengalensis.LG16                           C 0 I 9
s Nycticebus_coucang.k141_6040852                             815  3 +      1868 TA-----------------------G
i Nycticebus_coucang.k141_6040852                       C 0 I 9
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65681358  3 +  89412551 TA-----------------------G
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 I 9
s Ochotona_princeps.JH802095.1                            5001207  3 -  23139505 CA-----------------------G
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3692287  3 +  10294119 ta-----------------------a
i Octodon_degus.JH651621.1                              C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1085999  3 +   1425656 ta-----------------------t
i Odocoileus_virginianus.KZ101650.1                     I 22 I 2
s Okapia_johnstoni.LVCL01S0017931.1                         44072  3 +     78940 ta-----------------------t
i Okapia_johnstoni.LVCL01S0017931.1                     I 28 I 2
s Ondatra_zibethicus.OndZib_scaffold_6821                  131746  3 +    145789 CA-----------------------A
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  44680  3 +     62360 CA-----------------------A
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7230474  3 -   7562323 ta-----------------------t
i Orcinus_orca.KB316965.1                               C 0 I 2
s Orycteropus_afer.OryAfe_flattened_line_371885              1674  3 +      3658 TA-----------------------T
i Orycteropus_afer.OryAfe_flattened_line_371885         C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141885166  3 + 163896628 TA-----------------------G
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      317137  3 -    505867 TA-----------------------T
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        6302  3 -     53940 TA-----------------------G
i Otolemur_crassicaudatus.k141_505435                   C 0 I 9
s Otolemur_garnettii.GL873528.1                          18014268  3 -  38779656 TA-----------------------G
i Otolemur_garnettii.GL873528.1                         C 0 I 9
s Ovis_aries.CM001582.2                                 134085221  3 - 275406953 TA-----------------------T
i Ovis_aries.CM001582.2                                 I 5 I 2
s Ovis_canadensis.OviCan_scaffold_6251                      86467  3 +    140051 TA-----------------------T
i Ovis_canadensis.OviCan_scaffold_6251                  I 1 I 2
s Pan_paniscus.CM003386.1                               127579691  3 - 205426864 TA-----------------------G
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120156851  3 - 196562556 TA-----------------------G
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  41899  5 +    295523 TAT-A--------------------T
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3645715  3 +  18214204 ta-----------------------t
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5035352  3 -   6340057 ta-----------------------t
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1074106  3 -   1292953 ta-----------------------t
i Pantholops_hodgsonii.KE114631.1                       I 10 I 2
s Papio_anubis.CM001492.2                               188161591  3 - 188283584 TA-----------------------G
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              4681  3 +     25005 TA-----------------------G
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47518963  3 +  47705337 TA-----------------------G
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 72954  3 -    104429 TA-----------------------G
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   11486  3 +     14967 TA-----------------------G
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 7351  3 -      7628 TA-----------------------G
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    123374  3 -    135482 TG-----------------------T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          11964  3 -     23713 TA-----------------------G
i Perodicticus_ibeanus.k141_117958                      C 0 I 9
s Perodicticus_potto.k141_1136815                           13115  3 +     61070 TA-----------------------G
i Perodicticus_potto.k141_1136815                       C 0 I 9
s Perognathus_longimembris.PerPac_flattened_line_19359       3409  3 +     49596 GA-----------------------A
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615458.1                       2840493  3 -   3366660 ca-----------------------a
i Peromyscus_maniculatus.KI615458.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    18120  3 -     36578 TA-----------------------A
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              4937  3 +      8220 TA-----------------------T
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 I 4
s Piliocolobus_badius.k141_1987485                           5149  3 -      5908 TA-----------------------G
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       5768  3 -     17985 TA-----------------------G
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            5135  3 +      7694 TA-----------------------G
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26743618  3 +  26888534 TA-----------------------G
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990          11419  3 +     21690 TA-----------------------T
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 I 12
s Plecturocebus_bernhardi.k141_959214                       27256  3 +     44506 TA-----------------------A
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        27469  3 +     67491 TA-----------------------A
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      17708  3 -     98129 TA-----------------------A
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     27309  3 +    147771 TA-----------------------A
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         3944  3 -     43940 TA-----------------------A
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          8027  3 -     55515 TA-----------------------A
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         27381  3 +    152463 TA-----------------------A
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       5188  3 -    119457 TA-----------------------A
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         17103  3 +    134592 TA-----------------------A
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          27691  3 -     75465 TA-----------------------A
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              192322  3 -    373494 TA-----------------------G
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19812971  3 +  19899266 TA-----------------------G
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               8891  3 -     15069 TA-----------------------G
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              9006  3 +     14865 TA-----------------------G
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                5302  3 -      9567 TG-----------------------T
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6853918  3 +  12164890 TA-----------------------G
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     22726  3 -     30946 TA-----------------------G
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         9026  3 +     11805 TA-----------------------G
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           48360  3 +     52369 TA-----------------------G
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         40747  3 -     44753 TA-----------------------G
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            22670  3 +     27322 TA-----------------------G
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       22315  3 -     53241 TA-----------------------G
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         44578  3 -     48185 TA-----------------------G
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           40305  3 +     77221 CA-----------------------A
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        252268  3 -    344369 TG-----------------------T
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13248935  3 -  17261082 CA-----------------------T
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             606885  3 -   3946241 CA-----------------------T
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131542046  3 - 161321710 ta-----------------------t
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             32997  3 +     56732 TA-----------------------G
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6809494  3 +   6970761 TA-----------------------G
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             8883  3 +     18040 TA-----------------------G
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                22847  3 +     68503 TA-----------------------T
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 22 I 2
s Rattus_norvegicus.chr11                                13920696  3 +  90463843 CA-----------------------C
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1794762  3 +   2252614 TA-----------------------T
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                            3262  3 -     17045 TA-----------------------G
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206380749  3 - 206558726 TA-----------------------G
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44859652  3 -  45163003 TA-----------------------G
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                22280  3 +    109198 CA-----------------------T
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                      3523  3 -      4338 ta-----------------------g
i Saiga_tatarica.SaiTat_scaffold_371890                 I 10 I 2
s Saimiri_boliviensis.NW_024100938.1                     15677705  3 -  43202129 TA-----------------------A
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        9619  3 +     34089 TA-----------------------A
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              9558  3 -     60842 TA-----------------------A
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              9652  3 +     67014 TA-----------------------A
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              9629  3 +     60816 TA-----------------------A
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 9566  3 -     76454 TA-----------------------A
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17346336  3 -  30362882 TA-----------------------A
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         25657  3 -     62485 TA-----------------------A
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   41546 26 -    114521 TATTATATATATATATCAGGATATAT
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        6498  3 +     15331 TA-----------------------G
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      11873  3 +     20762 TA-----------------------G
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         121877  3 +    130994 TA-----------------------G
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           40657  3 +     46263 TA-----------------------G
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     33802  3 +     42640 TA-----------------------G
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        16824  3 +     30600 TA-----------------------G
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  106857  3 -    120886 CA-----------------------A
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            26203  3 +    739146 TA-----------------------T
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17776537  3 -  27805282 TA-----------------------T
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2245215  3 +   2842873 ta-----------------------a
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             241045  3 -    276980 TA-----------------------T
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            35245  3 +     62062 TA-----------------------T
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189277242  3 + 218635234 AA-----------------------T
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        20002  3 -  13920577 TA-----------------------G
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               18480  3 +     45698 TA-----------------------T
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      812834  3 +   1148477 AA-----------------------T
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  63476  3 +     99546 TA-----------------------T
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194013124  3 - 194193292 TA-----------------------G
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                  1663  3 -      3104 TA-----------------------T
i Tolypeutes_matacus.TolMat_scaffold_475685             C 0 C 0
s Trachypithecus_auratus.k141_738098                        30145  3 +     38948 TA-----------------------G
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   23705  3 -     32910 TA-----------------------G
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      5606  3 -     12939 TA-----------------------G
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       5034  3 -     14244 TA-----------------------G
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           46427  3 -     54611 TA-----------------------G
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        4228  3 -     11566 TA-----------------------G
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     6412  3 -     15592 TA-----------------------G
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          5064  3 +     14371 TA-----------------------G
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   3350  3 +     12481 TG-----------------------G
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        3331  3 -     24393 TA-----------------------G
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       8475  3 -     28054 TA-----------------------G
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44663259  3 -  44834318 TA-----------------------G
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       5571  3 +     13828 TA-----------------------G
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                  11020  3 +     90398 ta-----------------------t
i Tragulus_javanicus.TraJav_scaffold_14717              I 42 I 12
s Trichechus_manatus.JH594618.1                          16091012  3 +  31416278 TA-----------------------T
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2802259  3 -   3938065 TA-----------------------G
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                   11087  3 +     13056 TA-----------------------G
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69319204  3 -  96451834 ta-----------------------t
i Tursiops_truncatus.MRVK01000923.1                     C 0 I 2
s Uropsilus_gracilis.UroGra_scaffold_4115                    1936  3 +    136657 TA-----------------------T
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 C 0
s Ursus_maritimus.KK498671.1                              6522695  3 +  28682327 TA-----------------------T
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                 10591  3 -     20643 TA-----------------------G
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             30126  3 -     33872 TA-----------------------G
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1530236  3 -   2331223 TA-----------------------T
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                146364  3 -    281493 TA-----------------------T
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       132710  3 -    134049 TA-----------------------A
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_202118                     2326  3 -      3360 CA-----------------------A
i Zapus_hudsonius.ZapHud_scaffold_202118                C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            3795  3 -     13665 TA-----------------------T
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 I 2
e Eptesicus_fuscus.JH977687.1                             4710851  0 +   6522550 C
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Zalophus_californianus.ZalCal_flattened_line_4097        221654  0 -    227762 C
e Tonatia_saurophila.TonSau_scaffold_3334                  140002  0 -    259118 C
e Tadarida_brasiliensis.TadBra_scaffold_61492                4259  0 +     20549 C
e Pteronotus_parnellii.KE867983.1                            7995  0 -     27784 C
e Pipistrellus_pipistrellus.PipPip_scaffold_3306           101415  0 +    112873 C
e Odobenus_rosmarus.KB229369.1                             686793  0 -   3126709 C
e Noctilio_leporinus.NocLep_scaffold_12062                  52626 31 +     94413 I
e Myotis_myotis.MyoMyo_scaffold_6123                        15918  0 +     66751 C
e Myotis_lucifugus.GL429887.1                             3470691  0 -   3747815 C
e Myotis_davidii.KB114863.1                               5024262  0 +   6462685 C
e Myotis_brandtii.KE161952.1                               973184  0 +   8389877 C
e Murina_feae.MurFea_scaffold_2254                          26170  0 -    100666 C
e Mormoops_blainvillei.MorMeg_scaffold_2952                165343  0 +    265003 C
e Miniopterus_schreibersii.MinSch_scaffold_24116            39640  0 +     45743 C
e Miniopterus_natalensis.LDJU01000022.1                   8215181  0 +  10048721 C
e Micronycteris_hirsuta.MicHir_scaffold_37978               26828  0 -     32043 C
e Lasiurus_borealis.LasBor_scaffold_59542                    7402  0 +     26176 C
e Desmodus_rotundus.KZ672188.1                           18703091  0 -  18957592 C
e Carollia_perspicillata.CarPer_scaffold_4436               63873  0 +     67245 C
e Bos_taurus.CM000177.6                                  22668311  0 + 158972876 C
e Bos_mutus.JH883513.1                                     421838  0 +    998990 C
e Bos_indicus.CM003021.1                                 22959659  0 + 161108492 C
e Bison_bison.KN264915.1                                   305553  0 -   6870073 C
e Artibeus_jamaicensis.ArtJam_scaffold_41619                12877  0 -     29036 C
e Anoura_caudifer.AnoCau_scaffold_422                      394587  0 -    631301 C
e Hylobates_pileatus_a.tarseq_592                             37267 2881 -     60944 I
e Tarsius_wallacei.k141_48636                               64696  0 +     65473 C
e Tarsius_lariang.k141_609102                               31387  0 +     42269 C
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Mirza_zaza.k141_593947                                     6292  0 -     12809 C
e Microcebus_murinus.CM007691.1                          16515597  0 +  47401472 C
e Cephalopachus_bancanus.k141_702587                        12545  0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530  0 +    345090 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               18718 30 +    209709 A--------------TA------TCCT----AAAA--G--TGATTGA--AG-GTA-AAATGA
s Acinonyx_jubatus.LLWD01000356.1                         2041564 31 +   3721120 N--------------NN------NNNN----NNNNNNN--NNACTGA--AA-GTA--AGTGA
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    119206 30 -    189883 A--------------TT------TCGT----GAAT--A--TGATTGA--AA-TTA-TAATGA
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10665431 31 +  23371972 A--------------TA------TCCT----GAACAGA--AGACTGA--AG-GTA--AGTGA
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7102380 31 -  16596857 A--------------TA------TCTT----GAACAGA--TGACTGA--AG-GTA--AATGA
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_141108                   2559 30 -      7259 A--------------TG------TCCT----GAAT--A--TGACCGA--AG-GTG-TCATGA
i Allactaga_bullata.AllBul_scaffold_141108              C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   6604 30 -     60446 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         7318 30 -     29318 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         6256 30 +     38766 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          7214 30 -     80423 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              2162 30 +     19852 A--------------TA------TCCT----GAAT--A--TGATTGA--AG-GTC-AAATGA
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                4382 30 -     12443 A--------------TA------TCCT----GAAT--A--TGATTGA--AG-GTC-AAATGA
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                             1705 30 +      5070 A--------------TA------TCCT----GAAT--A--TGATTGA--AG-GTC-AAATGA
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                 1452 30 -      1641 A--------------TA------TCCT----GAAT--A--TGATTGA--AG-GTC-AAATGA
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          4191 30 -     24210 A--------------TA------TCCT----GAAT--A--TGATTGA--AG-GTC-AAATGA
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_494922                              695 30 -      8325 A--------------TA------TCCT----GAAT--A--TGATTGA--AG-GTC-AAATGA
i Alouatta_nigerrima.k141_494922                        C 0 C 0
s Alouatta_palliata.k141_405616                              6609 30 +     16794 A--------------TA------TCCT----GAAT--A--TGATTGA--AG-GTC-AAATGA
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_347198                              638 30 +      9111 A--------------TA------TCCT----GAAT--A--TGATTGA--AG-GTC-AAATGA
i Alouatta_puruensis.k141_347198                        C 0 C 0
s Alouatta_seniculus.k141_790278                             5886 30 -      9835 A--------------TA------TCCT----GAAT--A--TGATTGA--AG-GTC-AAATGA
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3528625 28 +   4113121 A--------------TC------TCCT----GAAT--A--TGACTGA--A--GTA--AATGA
i Ammotragus_lervia.NIVO01013474.1                      I 2 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      394587 19 -    631301 ----------------------------------T--A--TGACTGA--AG-GTA--AATCA
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             5853 28 +     55446 a--------------ta------tctt----gaat--a--taactga--a--GTA--AATGA
i Antilocapra_americana.AntAmePen_scaffold_27338        I 2 C 0
s Aotus_azarae.k141_3170768                                 67496 30 +     78111 A--------------TA------TCCT----GAAT--A--TGATTGA--AG-GTC-AAATGA
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                           10440 27 +     22701 A--------------TA------TCCT----GAAT--A--TGATTGA--AG-GTC----TGA
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5754406 30 +   9889416 A--------------TA------TCCT----GAAT--A--TGATTGA--AG-GTC-AAATGA
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                            10984 30 -    104377 A--------------TA------TCCT----GAAT--A--TGATTGA--AG-GTC-AAATGA
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                              11013 30 +     23246 A--------------TA------TCCT----GAAT--A--TGATTGA--AG-GTC-AAATGA
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     3643 30 +     11424 A--------------TA------TCCT----GAAT--A--TGACTGA--AG-GTA-TAATGA
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        7595 30 +      9265 A--------------TA------TTCT----GAAT--G--TGACTGA--AG-GCA-AAATTA
i Arctocebus_calabarensis.k141_587554                   I 9 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                12877 19 -     29036 ----------------------------------T--A--TGGCTGA--AG-GTA--AATGA
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9544296 30 +  39197703 A--------------TA------TCCT----GAAT--A--TGATTGA--AG-GTC-AAATGA
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             65570 30 +     85812 A--------------TA------TCCT----GAAT--A--TGATTGA--AG-GTC-AAATGA
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                16580 30 +     89302 A--------------TA------TCCT----GAAT--A--TGATTGA--AG-GTC-AAATGA
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             21084 30 -     58268 A--------------TA------TCCT----GAAT--A--TGATTGA--AG-GTC-AAATGA
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             69078 30 +    119057 A--------------TA------TCCT----GAAT--A--TGATTGA--AG-GTC-AAATGA
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              11047 30 -     25888 A--------------TA------TCCT----GAAT--A--TGATTGA--AG-GTC-AAATGA
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                12121 30 -     16375 A--------------TA------TCCT----GAAT--G--TGGCTGA--AG-GTA-AAATTA
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               5737 30 +      6337 A--------------TA------TCCT----GAAT--G--TGGCTGA--AG-GTA-AAATTA
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26386025 28 +  51448160 A--------------TA------TCCT----GAAT--A--TGACTGA--A--GTA--AATGA
i Balaenoptera_acutorostrata.KI537095.1                 I 2 C 0
s Balaenoptera_bonaerensis.DF502048.1                       11198 28 -     13118 A--------------TA------TCCT----GAAT--A--TGACTGA--A--GTA--AATGA
i Balaenoptera_bonaerensis.DF502048.1                   I 2 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   50617 28 -     72089 A--------------TA------TCCT----GAAC--A--TGACTGA--A--GTA--AATGA
i Beatragus_hunteri.BeaHun_scaffold_21644               I 2 C 0
s Bison_bison.KN264915.1                                   305553 24 -   6870073 ------------------------ACT----GAAT--A--TGACTGA--A--GTA--AATTA
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22959659 24 + 161108492 ------------------------ACT----GAAT--A--TGACTGA--A--GTA--AATTA
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     421838 24 +    998990 ------------------------ACT----GAAT--A--TGACTGA--A--GTA--AATTA
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22668311 24 + 158972876 ------------------------ACT----GAAT--A--TGACTGA--A--GTA--AATTA
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               677165 34 +   1914593 a--------------tatacacatact----gaaT--A--TGACTGA--A--GTA--AATTA
i Bubalus_bubalis.KI419065.1                            I 2 C 0
s Cacajao_ayresi.k141_724503                               118916 30 -    171031 A--------------TA------TCCT----GAAT--A--TGACTGA--AG-GTC-AAATGA
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 17936 30 +    125063 A--------------TA------TCCT----GAAT--A--TGACTGA--AG-GTC-AAATGA
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                19983 30 -    216513 A--------------TA------TCCT----GAAT--A--TGACTGA--AG-GTC-AAATGA
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       12526 30 -    134917 A--------------TA------TCCT----GAAT--A--TGACTGA--AG-GTC-AAATGA
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3225131 30 -   8989139 A--------------TA-----ACCCT----GAAT--A--TGACTGA--AA-GTA--AGTCA
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           402831 30 -  15254737 A--------------TA-----ACCCT----GAAT--A--TGACTGA--AA-GTA--AGTCA
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2978569 30 +   6889770 A--------------TA-----ACCCT----GAAT--A--TGACTGA--AA-GTA--AGTCA
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11528283 31 +  39901454 A--------------TA------TCCT----AAACAGA--TGACTGA--AG-GTA--AGTGA
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   23257 31 +     87036 A--------------TA------TCCT----AAACAGA--TGACTGA--AG-GTA--AGTGA
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11275180 31 -  35597290 A--------------TA------TCCT----AAACAGA--TGACTGA--AG-GTA--AGTGA
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11097677 31 +  39895921 A--------------TA------TCCT----AAACAGA--TGACTGA--AG-GTA--AGTGA
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16464462 31 -  44759192 A--------------TA------TCCT----AAACAGA--TGACTGA--AG-GTA--AGTGA
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21336058 28 + 157394656 A--------------TC------TCCT----GAAT--A--TGACTGA--A--GTA--AATGA
i Capra_aegagrus.CM003214.1                             I 2 C 0
s Capra_hircus.CM004562.1                               135714411 28 - 157403528 A--------------TC------TCCT----GAAT--A--TGACTGA--A--GTA--AATGA
i Capra_hircus.CM004562.1                               I 2 C 0
s Capromys_pilorides.CapPil_scaffold_1011243                  342 30 +      1208 t--------------ta------tttt----gaat--A--TGAATGA--AG-GTT-ATGTGG
i Capromys_pilorides.CapPil_scaffold_1011243            C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               63873 19 +     67245 ----------------------------------T--A--TGACTGG--AG-GTA--AATGA
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_1326                     1130 30 -    202837 A--------------CA------CTGT----GAAT--A--TAACTGA--AG-GTA-TAATGA
i Castor_canadensis.CasCan_scaffold_1326                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   164870 28 -    276539 A--------------TA-------CCT----GAAT--A--TGACTGA--AG-GTA--AATGA
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15790880 17 -  24422027 -----------------------------------------aaataa--ag-gTT-AAAAGA
i Cavia_aperea.AVPZ01000278.1                           I 11 C 0
s Cavia_porcellus.DS562889.1                             15802825 17 -  24440124 -----------------------------------------aaataa--ag-gTT-AAAAGA
i Cavia_porcellus.DS562889.1                            I 11 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       180997 17 +    436027 -----------------------------------------AAATAA--AG-GTT-AAAAGA
i Cavia_tschudii.CavTsc_scaffold_488                    I 11 C 0
s Cebus_albifrons.Contig22                               18896651 30 -  29618158 A--------------TA------TCCT----GAAT--A--TGATTGA--AG-GTG-AAATGA
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                13301 30 -     26817 A--------------TA------TCCT----GAAT--A--TGATTGA--AG-GTG-AAATGA
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                17545 30 +     25043 A--------------TA------TCCT----GAAT--A--TGATTGA--AG-GTG-AAATGA
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4370104 29 +   7569818 G--------------TA------TCCT----GAAT--A--TGATTGA--AG-GTA--AATGA
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_171732          261 29 +      8380 G--------------TA------TCCT----GAAT--A--TGATTGA--AG-GTA--AATGA
i Ceratotherium_simum_cottoni.CerCot_scaffold_171732    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6560544 30 +   6739814 A--------------TG------TCCT----AAAT--G--TGATTGA--Ag-gta-aaatga
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      32021 30 +     60454 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          7225 30 -     21101 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         64535 30 -    107033 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        7395 30 -     17608 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          4563 30 +     45019 A--------------TG------TCCT----CAAT--G--TGATTGA--AG-GTA-AAATGA
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           4839 30 +     15177 A--------------TG------TCCT----CAAT--G--TGATTGA--AG-GTA-AAATGA
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          7445 30 +     16677 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           29641 30 +     35983 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11996166 30 +  12117833 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46483148 30 +  46592721 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                       1259 30 -     27215 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       7459 30 +     35577 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        7253 30 -     25661 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        7425 30 -     17744 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        26794 30 +     37128 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           5816 30 -      6963 A--------------TA------TCTT----AAAT--A--TGAATGA--AG-GAA-AAAAAC
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           64337 30 -     68416 A--------------TA------TCCT----GAAT--G--TGGCTGA--AG-GTA-AAATTA
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_854352                             639 30 +     27737 A--------------TA------TCCT----GAAT--G--TGGCTGA--AG-GTA-AAATTA
i Cheirogaleus_medius.k141_854352                       C 0 C 0
s Cheracebus_lucifer.k141_619653                            10607 30 -     18223 A--------------TA------TCCT----GAAT--A--TGATTGA--AG-GTC-AAATGA
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              2348 30 +    188999 A--------------TA------TCCT----GAAT--A--TGATTGA--AG-GTC-AAATGA
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           46647 30 +     57117 A--------------TA------TCCT----GAAT--A--TGATTGA--AG-GTC-AAATGA
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          51327 30 +     54541 A--------------TA------TCCT----GAAT--A--TGATTGA--AG-GTC-AAATGA
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15965494 30 +  43084221 t--------------ta------tttt----gaat--a--taaatga--aG-GTA-AAATGG
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         76128 30 +    196370 A--------------TA------TCCT----GAAT--A--TGACTGA--AG-GTC-AAATGA
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          20309 30 +     40510 A--------------TA------TCCT----GAAT--A--TGACTGA--AG-GTC-AAATGA
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15144979 30 -  15256731 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      39443 30 -     53260 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101150002 30 + 101219884 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-gta-aaatga
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                19844 30 -     21363 G--------------TA------TCCT----GAAT--A--TAACAGA--AG-GGG-AAAAGA
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           765148 30 +    964067 G--------------TA------TCCT----GAAT--A--TGACAGA--AG-GGG-AAAAGA
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_304221              2771 31 -      7053 G--------------TA------TCCT----GAGT--A--TGACTGA--GG-GTATTAATAA
i Chrysochloris_asiatica.ChrAsi_scaffold_304221         I 6 C 0
s Colobus_angolensis.KN985967.1                          10889773 30 +  10971483 A--------------TG------TCCT----AAGT--G--TGATTGA--AG-gta-aaatga
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147667701 30 + 156195979 A--------------TG------TCCT----AAGT--G--TGATTGA--AG-GTA-AAATGA
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            19684 30 +     23629 A--------------TG------TCCT----AAGT--G--TGATTGA--AG-GTA-AAATGA
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60624120 28 +  78930452 T--------------TA------TCCT----GAAA--A--TGAGTGA--AG--CA--AATGA
i Condylura_cristata.JH655880.1                         C 0 I 4
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         4517 29 -      5782 A--------------TA------TCCT----AAAT--A--TGACTGA--AG-GTA--AATGA
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 284111 30 -    399297 A--------------CA------TCTT----GAAT--A--TGATTGA--AG-ATA-TAATGA
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53036397 30 +  72327488 A--------------TA------TCTT----AAAT--A--CAATTGA--AG-TTA-TAATAA
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              4004 27 -     22648 ----------------T------TACT----AGCT--A--TGATTTA--AG-GTA--TTTCA
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            59500 31 -     70449 A--------------TA------TCCT----GAATAAA--TGACTGA--AA-GTA--AGTGA
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  216244 30 -    956709 A--------------TA------TCCG----AAAT--A--TGACTGA--AG-GTA-AAATGA
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 37216 30 -     67205 T--------------TA------TTTT----GATT--A--TAAATGA--AG-GTT-ATGTGG
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                22063 30 +     26546 T--------------TA------TTTT----GAAT--A--TGAATGA--AG-GTA-AAATGG
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             63207 30 -    236241 T--------------TA------TTTT----TAAT--A--CGAATGA--AG-GTA-CAATGG
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          186865 30 -   6883506 A--------------AA------TCTT----GAAT--A--TGACTGA--AG-GGA-AAGAGC
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16850283 30 +  31942871 A--------------TA------TCCT----GAAT--G--TGACTGA--AG-GTA-AAATTA
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80042621 28 -  96802777 a--------------ta------tcct----gaat--A--TGACTGA--A--GTA--AATGA
i Delphinapterus_leucas.KZ290064.1                      I 6 C 0
s Desmodus_rotundus.KZ672188.1                           18703091 19 -  18957592 ----------------------------------T--A--TGACTGA--AG-GTA--AATGA
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 328503 29 +    993696 G--------------TA------TCCT----GAAT--A--TGATTGA--AG-GTA--AATGA
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   9137 29 +    151128 A--------------TA------TTCT----GAAT--A--TGATTGA--AG-GTA--AATGA
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   160969 29 +    228994 T--------------TA------TTTT----GAAT--A--TAAAAG---AG-GTA-AAATGG
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3661425  6 +   4240102 --------------------------------------------------------TAGTGA
i Dipodomys_ordii.KN672545.1                            I 7 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  3799  6 -     11986 --------------------------------------------------------TAGTGA
i Dipodomys_stephensi.DipSte_scaffold_84338             I 7 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                41783 17 -     73477 -----------------------------------------GAATAA--AG-GTT-AAATTA
i Dolichotis_patagonum.DolPat_scaffold_14102            I 11 C 0
s Echinops_telfairi.JH980316.1                           23005040 30 -  44670279 A--------------CA------TCCA----GAAC--A--TAATGGA--AG-GCT-AAGTAA
i Echinops_telfairi.JH980316.1                          I 4 C 0
s Eidolon_helvum.KE772537.1                                 15227 29 +     24177 A--------------TA------TTCT----GAAC--A--TGACTGA--AG-GTA--AATGA
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1498573 28 +   1727528 a--------------tc------tccT----GAAT--A--CGACTGA--A--GTA--AATGA
i Elaphurus_davidianus.JRFZ01086400.1                   I 2 C 0
s Elephantulus_edwardii.JH947210.1                        7836555 30 +  15467074 A--------------CA------TTCT----GACT--A--TGGCAGA--AG-GTA-AAGTGA
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        245107 30 -    369425 A--------------TA------TCTT----AAGA--A--TGACTGT--AG-TTA-TAATAA
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01076532.1                           1459 30 +      9159 A--------------TA------TCTT----AAAT--A--TGACTGT--AG-TTA-TAATAA
i Ellobius_talpinus.LOJH01076532.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85879427 31 +  99434291 A--------------TA------TCTT----GAACAGA--TGACTGA--AG-GTA--AGTGA
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4710851 19 +   6522550 ----------------------------------T--A--TGACTGA--AG-GGA--AATGA
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5858366 29 -   7175178 G--------------TA------TCCT----GAAT--A--TGACTGA--AG-GTA--AATGA
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13356852 29 +  41866177 G--------------TA------TCCT----GAAT--A--TGACTGA--AG-GTA--AATGA
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          18342 29 +     92910 G--------------TA------TCCT----GAAT--A--TGACTGA--AG-GTA--AATGA
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11543515 29 +  16010500 g--------------tt------acca----gaaT--A--TCACTAA--AG-GTA--AGTCC
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48782012 30 -  48907691 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          320868 28 +    330699 A--------------TA------TCCT----GAAT--A--TGACTGA--A--GTA--AATGA
i Eschrichtius_robustus.EscRob_flattened_line_685       I 2 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             67324 28 +     89355 A--------------TA------TCCT----GAAT--A--TGACTGA--A--GTA--AATGA
i Eubalaena_japonica.EubJap_flattened_line_7756         I 2 C 0
s Eulemur_albifrons.k141_715837                             10401 30 +     13586 A--------------TA------TCCT----GAAT--G--TGACTGA--AG-GTA-AAATTA
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_1015201                              3660 30 -      4292 A--------------TA------TCCT----GAAT--G--TGGCTGA--AG-GTA-ATATTA
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            16797 30 +     36558 A--------------TA------TCCT----GAAT--G--TGGCTGA--AG-GTA-AAATTA
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            13119 30 +     60246 A--------------TA------TCCT----GAAT--G--TGCCTGA--AG-GTA-AAATTA
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                16604 30 +    109717 A--------------TA------TCCT----GAAT--G--TGGCTGA--AG-GTA-AAATTA
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 4587 30 -     19505 A--------------AA------TCCT----GAAT--G--TGGCTGA--AG-GTA-AAATTA
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                21262 30 +     27497 A--------------TA------TCCT----GAAT--G--TGACTGA--AG-GTA-AAATTA
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           23718 30 +     26808 A--------------TA------TCCT----GAAT--G--TGGCTGA--AG-GTA-AAATTA
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                38450 30 +     46535 A--------------TA------TCCT----GAAT--G--TGGCTGA--AG-GTA-AAATTA
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              21191 30 -     29447 A--------------TA------TCCT----GAAT--G--TGGCTGA--AG-GTA-AAATTA
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129901137 31 - 159252932 a--------------ta------cCCC----AAATAAA--TGACTGA--AA-GTA--AGTGA
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129288114 31 - 158578461 a--------------ta------ccCC----AAATAAA--TGACTGA--AA-GTA--AGTGA
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 29304 31 +     52776 A--------------TA------CCCC----AAATAAA--TGACTGA--AA-GTA--AGTGA
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13897440 30 -  19261668 T--------------TG------TTTT----GAAT--c--tgaatga--ag-ata-aaatgt
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     216453 30 -    847004 A--------------TA------TTCT----GAAT--G--TGACTGA--AG-GTA-AAATTA
i Galago_moholi.ctg555                                  I 9 C 0
s Galago_senegalensis.k141_964197                           18815 30 -     43889 A--------------TA------TTCT----GAAT--G--TGACTGA--AG-GTA-AAATTA
i Galago_senegalensis.k141_964197                       I 9 C 0
s Galagoides_demidoff.k141_1769638                          15956 30 +     27357 A--------------TA------TTCT----GAAT--G--TGACTGA--AG-GTA-AAATTA
i Galagoides_demidoff.k141_1769638                      I 9 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               160724 30 +    324696 A--------------TA------TCCT----AAAT--A--TGACTGA--AG-GTA-AAATGA
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    188347 28 -    189561 a--------------tc------tcct----gaAT--A--TGACTGA--A--GTA--AATGA
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 2 C 0
s Glis_glis.GliGli_scaffold_79770                           17635 26 -     18683 ------------------------TCT----CAAT--A--TGGCTGA--AA-GTA-AAATGA
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                              10415 30 -     14630 A--------------TA------TCCT----AAAA--G--TGATTGA--AG-GTA-AAATGA
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119657515 30 - 195582420 A--------------TA------TCCT----AAAA--G--TGATTGA--Ag-gta-aaatga
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   80953 30 +    118900 A--------------CA------TTTT----CAAT--A--TGATTGA--AT-GTA-GAATGA
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         7191 32 +     10286 A--------------TA------TCCT----GAAT--G--TGGCTGAGGAG-GTA-AAATTA
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             5672 32 -     11661 A--------------TA------TCCT----GAAT--G--TGGCTGAGGAG-GTA-AAATTA
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                            10996 32 +     56096 A--------------TA------TCCT----GAAT--G--TGGCTGAGAAG-GTA-AAATTA
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        34245 32 -     42470 A--------------TA------TCCT----GAAT--G--TGGCTGAGGAG-GTA-AAATTA
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        50871 32 -     54384 A--------------TA------TCCT----GAAT--G--TGGCTGAGGAG-GTA-AAATTA
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              24618 31 +     53719 A--------------TA------TCCT----GAATAGA--TGAATGA--AG-GTA--AGGGA
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                35444 28 -     91191 A--------------TC------TCCT----GAAT--A--TGACTGA--A--GTA--AATGA
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 2 C 0
s Heterocephalus_glaber.JH602058.1                        2561770 30 +  31725842 t--------------ta------tttt----gaat--a--tgaatGA--AG-ACA-AAATGA
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               64201 30 +     73687 A--------------GA------TCCT----GAAG--A--TGACTCA--AG-GTA-AAGTGG
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              152691 28 +    277961 A--------------TA------TCCT----GAAT--A--TGACTGA--A--GTA--AATGA
i Hippopotamus_amphibius.HipAmp_scaffold_1308           I 2 C 0
s Hipposideros_armiger.JXIK01001085.1                      286159 29 -    477199 a--------------ta------tccc----gtCT--A--TAACTGA--AG-GTA--AATGA
i Hipposideros_armiger.JXIK01001085.1                   I 446 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959               3432 29 +     26078 a--------------ta------tCCT----GAAC--A--TAACTGA--AG-GTA--AATGA
i Hipposideros_galeritus.HipGal_scaffold_52959          I 34 C 0
s Hoolock_leuconedys.ctg79                                     10340 30 -   7690867 A--------------TA------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 25054 31 -     67322 A--------------TA------CCCT----GAATAAA--TTACTGA--AG-GTA--AGTGA
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           22425 17 -    119109 -----------------------------------------GAATAA--AG-GTT-AAATAA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       I 9 C 0
s Hylobates_abbotti.k141_1816750                             2911 30 +      3202 A--------------TA------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1136966                               920 30 +      9785 A--------------TA------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Hylobates_agilis.k141_1136966                         C 0 C 0
s Hylobates_klossii.k141_468230                              4400 30 +      5464 A--------------TA------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14629746 30 -  25970782 A--------------TA------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            2298 30 +      4161 A--------------TA------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                    10680 30 +     22540 T--------------TA------TTTT----GGAT--A--GGAGCGA--AG-GTA-AAATGA
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7131517 30 +  13083262 a--------------ta------tctt----aaat--a--tgacTGA--AG-GTA-TAATGA
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   2733 30 +      3484 A--------------TA------TCCT----GAAT--G--TGACTGA--AG-GTA-AAATTA
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              14847 28 +     17520 A--------------TA------TCCT----GAAT--A--TGACTGA--G--GTA--AATGA
i Inia_geoffrensis.IniGeo_flattened_line_66725          I 2 C 0
s Jaculus_jaculus.JH725517.1                              8580307 30 +  11848649 A--------------TG------TCCT----GACT--A--TGATGGA--AG-GTA-TCACGA
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               29464 28 +     37189 A--------------TA------TCCT----GAAT--A--TGACTGA--A--GTA--AATGA
i Kogia_breviceps.KogBre_flattened_line_35920           I 2 C 0
s Lagothrix_lagothricha.k141_12968                          55168 30 -    147782 A--------------TA------TCCT----GAAT--A--TGATTGA--AG-GTC-AAATGA
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    7402 19 +     26176 ----------------------------------T--A--TGATTGA--AG-ACA--CATGA
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258412549 32 - 285822530 A--------------TA------TCCT----GAAT--G--TGGCTGAGGAG-GTA-AAATTA
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        29877 30 +     39228 A--------------TA------CCCT----GAAT--G--TGGCTGA--AG-GTA-AAATTA
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            59241 30 +     63517 A--------------TA------CCCT----GAAT--G--TGGCTGA--AG-GTA-AAATTA
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        37623 30 -     38897 A--------------TA------TCCT----GAAT--G--TGGCTGA--AG-GTA-AAATTA
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      3667 30 -     13103 A--------------TA------CCCT----GAAT--G--TGGCTGA--AG-GTA-AAATTA
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3093375 33 -   3498232 A--------------CA------TCCT----GAACAGATATGACTGA--AG-GTA--Agtga
i Leptonychotes_weddellii.KB714749.1                    C 0 I 311
s Lepus_americanus.LepAme_scaffold_62849                    22153 30 +     22452 A--------------TA------CCCT----GAAT--A--AGACCAG--AG-GTA-AAATGA
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            141772 28 +   3060487 A--------------TA------TCCT----GAAT--A--TGACTGA--A--GTA--AATGA
i Lipotes_vexillifer.KE558548.1                         I 1 C 0
s Lophocebus_aterrimus.ctg55                             19253633 30 +  19376315 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           16416 30 +     84689 A--------------TA------TTCT----GAAT--G--TGACTGA--AG-GTA-AAATTA
i Loris_lydekkerianus.k141_550999                       I 9 C 0
s Loris_tardigradus.ctg97                                 3784149 30 +   6799190 A--------------TA------TTCT----GAAT--G--TAACTGA--AG-GTA-AAATTA
i Loris_tardigradus.ctg97                               I 9 C 0
s Loxodonta_africana.GL010040.1                          20599941 30 -  62548349 A--------------TA------TCCT----GAAT--A--TGACTGA--AG-GTA-AAATGG
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11097133 31 +  39895028 A--------------TA------TCCT----AAACAGA--TGACTGA--AG-GTA--AGAGA
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             25382 30 +     74745 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12711845 30 +  12821369 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                4418 30 -     26467 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           52289 30 +     63263 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 4399 30 -     26361 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_2667654                                 702 30 -      5626 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Macaca_leonina.k141_2667654                           C 0 C 0
s Macaca_maura.k141_251854                                  50818 30 -     79256 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196040916 30 + 196197964 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-gta-aaatga
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11451086 30 +  11645122 A--------------TG------TACT----AAAT--G--TGATTGA--Ag-gta-aaatga
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   9772 30 -     46448 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                7433 30 -     13212 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 21115 30 -     55006 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43846537 30 +  43892939 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               22399 30 -     24607 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               9769 30 -     27140 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                703838 29 +    802869 A--------------TA------TTCT----GAAC--A--TGTCTGA--AG-GTA--AATGA
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43442802 30 -  43563597 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4455601 30 -   4543643 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            154124 26 +    252755 -----------------------TCTT----GAAA--A--TGACTAA--AG-GTA--AATGA
i Manis_javanica.JSZB01003966.1                         I 1 C 0
s Manis_pentadactyla.KN017078.1                             41722 26 +     58827 -----------------------TCTT----GAAA--A--TGACTGA--AG-GTA--AATGA
i Manis_pentadactyla.KN017078.1                         I 1 C 0
s Marmota_marmota.CZRN01000005.1                         36879383 30 +  64221397 a--------------ta------tctt----aaat--a--tgacTGA--AG-GTA-TAATGA
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       67640 29 -    234502 A--------------TA------TCCT----GAAT--A--TGACTAA--AG-GCA--AATGA
i Megaderma_lyra.MegLyr_scaffold_3562                   I 5 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             8522 31 -     87323 A--------------TA------TTTC----GAACAGA--TGACTGA--AG-GTA--AGTGA
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 3332 30 +    115071 A--------------TT------TTTC----GAAT--A--CAATTGA--AG-TTA-AAGTGG
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1052971 30 -  26018355 A--------------TA------CCTT----AAAT--A--TGAGTGA--AG-TTA-TAATAA
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    4435 28 -     12939 A--------------TA------TCCT----GAAT--A--TGACTGA--A--GTA--AATGA
i Mesoplodon_bidens.MesBid_scaffold_96348               I 2 C 0
s Microcebus_murinus.CM007691.1                          16515597 25 +  47401472 -------------------------CA----GTAT--A--TGGCTGA--AG-GTA-AAATTA
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  46655 30 -     48017 A--------------TA------TCCA----GAGC--A--TAATGGA--AA-GTT-AAATAA
i Microgale_talazaci.MicTal_scaffold_34660              I 4 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               26828 19 -     32043 ----------------------------------T--A--TGACTGA--AG-GTA--AATGA
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22825943 30 -  98408828 A--------------TA------TTTT----GAGT--A--TGATTGT--AG-TTA-TAATAA
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8215181 19 +  10048721 ----------------------------------T--A--TGACTGA--AG-ATA--AATGA
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            39640 19 +     45743 ----------------------------------T--A--TGACTGA--AG-ATA--AATGA
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         7351 30 +     29742 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        18871 33 -    104932 A--------------CA------TCCT----GAACAGATATGACTGA--AG-GTA--AGTGA
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 I 214
s Mirza_zaza.k141_593947                                     6292 25 -     12809 -------------------------CA----GTAT--G--TGGCTGA--AG-GTA-AAATTA
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 152214 28 +    154973 A--------------TA------TCCT----GAAT--A--TGACTGA--A--GTA--AATGA
i Monodon_monoceros.MonMon_M_scaffold_5598              I 6 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                165343 19 +    265003 ----------------------------------T--A--TGACTGA--AG-GTA--AATGA
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  9020 28 -     19904 A--------------TC------TCCT----GAAA--A--TGACTGA--A--GTA--AATGA
i Moschus_moschiferus.MosMos_scaffold_78805             I 2 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  152347 31 -    168139 A--------------TA------TCCT----GAATAGA--TGAGTGA--AG-GTA--AGTGA
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          26170 19 -    100666 ----------------------------------T--A--TGGCTGA--AG-TTA--AATGA
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70773213 30 +  92629107 A--------------TT------TATT----GAAT--A--TGATTGA--AG-TTA-TAATGA
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75495277 30 +  98207768 A--------------TT------TATT----GAAT--A--TGATTGA--AG-TTA-TAATGT
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67562004 30 +  89017189 A--------------TT------TATT----GAAT--A--TTATTGA--AG-TTA-TAATGA
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74337985 30 +  97876770 A--------------TT------TATT----GAAT--A--TGATTGA--AG-TTA-TAATGA
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             16020 30 +     98495 A--------------TA------TTCT----CAAT--A--TGACTGA--AT-GTT-GAATGA
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 I 1
s Mustela_putorius.JH417978.1                             4430625 31 -  28371801 G--------------TA------TCTT----GAACAGA--TGACTGA--AG-TTA--AGTGA
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     96975 30 -    117718 t--------------ta------tttt----gaat--a--tgaATGA--AG-GTT-ATGTGG
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               973184 19 +   8389877 ----------------------------------T--A--TGACTGA--AG-GTA--AATGA
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5024262 19 +   6462685 ----------------------------------T--A--TGACTGA--AG-GTA--AATGA
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3470691 19 -   3747815 ----------------------------------T--A--TGACTGA--AG-GTA--AATGA
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        15918 19 +     66751 ----------------------------------T--A--TGACTGA--AG-GTA--AATGA
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_239326              214 36 +      2245 ATATATA--------TA------TTCT----GAAT--A--TGACAAA--AG-GGA-AAAAGA
i Myrmecophaga_tridactyla.MyrTri_scaffold_239326        I 5 I 221
s Nannospalax_galili.KL201303.1                            125688 30 +    362372 A--------------TA------TCTT----GAAC--A--TGACTGA--AG-GCA-TAATGA
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                              11612 30 +     48152 A--------------TG------TCCT----CAAT--G--TGATTGA--AG-GTA-AAATGA
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4492262 33 -  14209539 A--------------CA------TCCT----GAACAGATATGACTGA--AG-GTA--Agtga
i Neomonachus_schauinslandi.NINY01007774.1              C 0 I 218
s Neophocaena_asiaeorientalis.KZ688543.1                  3956805 28 -   4490290 a--------------ta------tcct----gaat--A--TGACTGA--A--GTA--AATGA
i Neophocaena_asiaeorientalis.KZ688543.1                I 6 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  52657 19 +     94413 ----------------------------------T--A--TGACTGA--AG-GTA--AATGA
i Noctilio_leporinus.NocLep_scaffold_12062              I 31 C 0
s Nomascus_annamensis.k141_762468                            1417 30 -      2755 A--------------TA------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Nomascus_annamensis.k141_762468                       C 0 C 0
s Nomascus_concolor.k141_256540                              8027 30 -      8966 A--------------TA------TCCT----AAAT--G--AGATTGA--AG-GTA-AAATGA
i Nomascus_concolor.k141_256540                         C 0 C 0
s Nomascus_gabriellae.k141_1400361                           1968 30 -      2203 A--------------TA------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_453                             7280 30 +     12787 A--------------TA------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Nomascus_siki_b.tarseq_453                        C 0 C 0
s Nomascus_siki_a.k141_421408                                  1882 30 +     16235 A--------------TA------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                40003 31 +   3668941 A--------------TG------TCCT----GAACAGA--TGACTGA--AG-GTA--AGTGA
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65573191 30 -  95554990 A--------------TA------TTCT----GAAT--G--TGATTGA--AG-GTA-AAATTA
i Nycticebus_bengalensis.LG16                           I 9 C 0
s Nycticebus_coucang.k141_6040852                             827 30 +      1868 A--------------TA------TTCT----GAAT--G--TGATTGA--AG-GTA-AAATTA
i Nycticebus_coucang.k141_6040852                       I 9 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65681370 30 +  89412551 A--------------TA------TTCT----GAAT--G--TGACTGA--AG-GTA-AAATTA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     I 9 C 0
s Ochotona_princeps.JH802095.1                            5001210 31 -  23139505 A--------------TA------TCTT----GAGT--A--TGATGAG--CAGCAA-AAATGA
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3692290 30 +  10294119 t--------------ta------tttt----gaat--a--tggaTGA--AG-ATT-ACATGG
i Octodon_degus.JH651621.1                              C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1086004 28 +   1425656 a--------------tc------tccT----GAAT--A--TGACTGA--A--GAA--AATGA
i Odocoileus_virginianus.KZ101650.1                     I 2 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         44077 28 +     78940 a--------------tc------tcct----gaAT--A--TGACTGA--A--GTA--AATGA
i Okapia_johnstoni.LVCL01S0017931.1                     I 2 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  131749 30 +    145789 A--------------TA------TCTT----AAGA--A--TGACTGT--AG-TTA-TAATAA
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  44683 30 +     62360 A--------------TA------CATT----AAAT--C--TGATTGA--AG-CCA-TAATAA
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7230479 28 -   7562323 a--------------ta------tcct----aaat--a--TGACTGA--A--GTA--AATGA
i Orcinus_orca.KB316965.1                               I 2 C 0
s Orycteropus_afer.OryAfe_flattened_line_371885              1677 30 +      3658 A--------------TA------TCCC----AAAT--A--TGACTGA--AG-ATA-AAATGA
i Orycteropus_afer.OryAfe_flattened_line_371885         C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141885169 30 + 163896628 A--------------TA------CTCT----GAAT--A--TGACCAG--AG-GTA-AAATGA
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      317140 31 -    505867 A--------------TA------TCCT----GAACAGA--TGACTGA--AG-GTA--AGTGA
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        6314 30 -     53940 A--------------TA------TTCT----GAAT--G--TGACTGA--AG-GTA-AAATTA
i Otolemur_crassicaudatus.k141_505435                   I 9 C 0
s Otolemur_garnettii.GL873528.1                          18014280 30 -  38779656 A--------------TA------TTCT----GAAT--G--TGACTGA--AG-GTA-AAATTA
i Otolemur_garnettii.GL873528.1                         I 9 C 0
s Ovis_aries.CM001582.2                                 134085226 28 - 275406953 A--------------TC------TCCT----GAAT--A--TGACTGA--A--GTA--AATGA
i Ovis_aries.CM001582.2                                 I 2 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      86472 28 +    140051 A--------------TC------TCCT----GAAT--A--TGACTGA--A--GTA--AATGA
i Ovis_canadensis.OviCan_scaffold_6251                  I 2 C 0
s Pan_paniscus.CM003386.1                               127579694 30 - 205426864 A--------------TA------TCCT----AAAA--G--TGATTGA--Ag-gta-aaatga
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120156854 30 - 196562556 A--------------TA------TCCT----AAAA--G--TGATTGA--AG-gta-aaatga
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  41904 31 +    295523 A--------------TA------TCCC----AAATAAA--TGATTGA--AA-GTA--AGTGA
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3645718 31 +  18214204 a--------------ta------tccC----AAATAAA--TGATTGA--AA-GTA--AGTGA
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5035355 31 -   6340057 a--------------ta------tcca----aaataaa--tgattga--aa-gtA--AGTGA
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1074111 28 -   1292953 a--------------tc------tcct----gaAT--A--TGACTGA--A--GTA--AATGA
i Pantholops_hodgsonii.KE114631.1                       I 2 C 0
s Papio_anubis.CM001492.2                               188161594 30 - 188283584 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-gta-aaatga
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              4684 30 +     25005 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47518966 30 +  47705337 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 72957 30 -    104429 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   11489 30 +     14967 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 7354 30 -      7628 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    123377 29 -    135482 A--------------TG------TGCT----GAATAAA----ACTGA--AG-GTA--AGGGA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          11976 30 -     23713 A--------------TA------TTCT----GAAT--G--TGATTGA--AG-GTA-AAATTA
i Perodicticus_ibeanus.k141_117958                      I 9 C 0
s Perodicticus_potto.k141_1136815                           13127 30 +     61070 A--------------TA------TTCT----GAAT--G--TGATTGA--AG-GTA-AAATTA
i Perodicticus_potto.k141_1136815                       I 9 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       3412  7 +     49596 A--------------TA------TCCT-----------------------------------
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 I 8
s Peromyscus_maniculatus.KI615458.1                       2840496 30 -   3366660 a--------------ta------cata----aaat--c--tgATTGA--AG-TCA-TAATAA
i Peromyscus_maniculatus.KI615458.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    18123 31 -     36578 T--------------TA------TTTT----GAAT--A--CCAATGA--AG-AAAAAAATGA
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              4944 28 +      8220 A--------------TA------TCCT----GAAT--A--TGACTGA--A--GTA--AATGA
i Phocoena_phocoena.PhoPho_flattened_line_53071         I 4 C 0
s Piliocolobus_badius.k141_1987485                           5152 30 -      5908 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       5771 30 -     17985 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            5138 30 +      7694 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26743621 30 +  26888534 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-gta-aaatga
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306           101415 19 +    112873 ----------------------------------T--A--TGACTGA--AG-GTA--AATGA
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990          11434 28 +     21690 A--------------TA------TCCT----GAAT--A--TGACTGA--A--GTA--AATGA
i Platanista_gangetica.PlaMin_flattened_line_72990      I 12 C 0
s Plecturocebus_bernhardi.k141_959214                       27259 30 +     44506 A--------------TA------TCCT----GAAT--A--TGATTGA--AG-GTC-AAATGA
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        27472 30 +     67491 A--------------TA------TCCT----GAAT--A--TGATTGA--AG-GTC-AAATGA
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      17711 30 -     98129 A--------------TA------TCCT----GAAT--A--TGATTGA--AG-GTC-AAATGA
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     27312 30 +    147771 A--------------TA------TCCT----GAAT--A--TGATTGA--AG-GTC-AAATGA
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         3947 30 -     43940 A--------------TA------TCCT----GAAT--A--TGATTGA--AG-GTC-AAATGA
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          8030 30 -     55515 A--------------TA------TCCT----GAAT--A--TGATTGA--AG-GTC-AAATGA
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         27384 30 +    152463 A--------------TA------TCCT----GAAT--A--TGATTGA--AG-GTC-AAATGA
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       5191 30 -    119457 A--------------TA------TCCT----GAAT--A--TGATTGA--AG-GTC-AAATGA
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         17106 30 +    134592 A--------------TA------TCCT----GAAT--A--TGATTGA--AG-GTC-AAATGA
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          27694 30 -     75465 A--------------TA------TCCT----GAAT--A--TGATTGA--AG-GTC-AAATGA
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              192325 30 -    373494 A--------------TA------TCCT----AAAA--G--TGATTGA--AG-gta-aaatga
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19812974 30 +  19899266 A--------------TA------TCCT----AAAA--G--TGATTGA--AG-GTA-AAATGA
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               8894 30 -     15069 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              9009 30 +     14865 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                5305 30 -      9567 G--------------GA------TCCT----GAAG--A--TGACTCA--AG-GTA-AAGTGG
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6853921 36 +  12164890 A--------------TA------TCCTTCCTGAAT--G--TGGCTGAGGAG-GTA-AAATTA
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     22729 29 -     30946 A--------------TA------TCCT----GAAT--G--TGGCTG---AG-GTA-AAATTA
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         9029 30 +     11805 A--------------TA------TCCT----GAAT--G--TGGCTGA--AG-GTA-AAATTA
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           48363 30 +     52369 A--------------TA------TCCT----GAAT--G--TGGCTGA--AG-GTA-AAATTA
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         40750 30 -     44753 A--------------TA------TCCT----GAAT--G--TGGCTGA--AG-GTA-AAATTA
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            22673 30 +     27322 A--------------TA------TCCT----GAAT--G--TGGCTGA--AG-GTA-AAATTA
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       22318 30 -     53241 A--------------TA------TCCT----GAAT--G--TGGCTGA--AG-GTA-AAATTA
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         44581 30 -     48185 A--------------TA------TCCT----GAAT--G--TGGCTGA--AG-GTA-AAATTA
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           40308 30 +     77221 A--------------TT------TTTT----GAAT--A--CGATTGA--AG-TTA-AAGTGG
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            7995 18 -     27784 ----------------------------------T--A--TGACTGA--A--GTA--AATGA
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        252271 31 -    344369 A--------------TA------TCTT----GAACAGA--TGACTGA--AG-GTA--AGTGA
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13248938 29 -  17261082 A--------------TA------TTCT----GAAC--A--TGACTGA--AG-GTA--AATGA
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             606888 29 -   3946241 A--------------TA------TTCT----GAAC--A--TGACTGA--AG-GTA--AATGA
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131542049 31 - 161321710 a--------------ta------tccC----AAATAAA--TGACTGA--AA-GTA--AGTGA
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             33000 30 +     56732 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6809497 30 +   6970761 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             8886 30 +     18040 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                22852 28 +     68503 A--------------TC------TCCT----GAAT--A--TGACTGA--A--GTA--AATGA
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 2 C 0
s Rattus_norvegicus.chr11                                13920699 30 +  90463843 A--------------TT------TATT----GAAT--A--TGATTGA--AG-TTA-TAGCGA
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1794765 29 +   2252614 G--------------TA------TCCT----GAAG--A--TGACTGA--AG-GCA--AATGA
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                            3265 30 -     17045 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206380752 30 - 206558726 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44859655 30 -  45163003 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                22283 29 +    109198 A--------------TA------TTCT----GAAC--A--TGACTGA--AG-GTA--AATGA
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                      3528 28 -      4338 a--------------ta------tTCT----GAAC--A--TGACTGA--A--GTA--AATGA
i Saiga_tatarica.SaiTat_scaffold_371890                 I 2 C 0
s Saimiri_boliviensis.NW_024100938.1                     15677708 30 -  43202129 A--------------TA------TCCT----GAAT--A--TGACTGA--AG-GTC-AAATGA
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        9622 30 +     34089 A--------------TA------TCCT----GAAT--A--TGACTGA--AG-GTC-AAATGA
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              9561 30 -     60842 A--------------TA------TCCT----GAAT--A--TGACTGA--AG-GTC-AAATGA
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              9655 30 +     67014 A--------------TA------TCCT----GAAT--A--TGACTGA--AG-GTC-AAATGA
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              9632 30 +     60816 A--------------TA------TCCT----GAAT--A--TGACTGA--AG-GTC-AAATGA
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 9569 30 -     76454 A--------------TA------TCCT----GAAT--A--TGACTGA--AG-GTC-AAATGA
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17346339 30 -  30362882 A--------------TA------TCCT----GAAT--A--TGATTGA--AG-GTG-AAATGA
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         25660 30 -     62485 A--------------TA------TCCT----GAAT--A--TGATTGA--AG-GTG-AAATGA
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   41572 29 -    114521 A--------------TA------TCCT----GAAT--A--TGACTGA--AG-GTA--AATGA
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 I 5
s Semnopithecus_entellus.k141_1572367                        6501 30 +     15331 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      11876 30 +     20762 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         121880 30 +    130994 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           40660 30 +     46263 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     33805 30 +     42640 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        16827 30 +     30600 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  106860 30 -    120886 A--------------TA------TCTT----AGAT--A--TGATTGA--AG-TCA-TAATAA
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            26206 29 +    739146 A--------------GT------TCCT----GAAT--A--TGATTGA--AG-GGA--TATGA
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17776540 27 -  27805282 ----------------A------TACT----GAAT--A--TTAGTGA--AG-ATA--ATTGA
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2245218 30 +   2842873 a--------------ta------tctt----aaat--a--tgacTGA--AG-GTA-TAATGA
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             241048 31 -    276980 A--------------TA------TCTT----AAACAGA--TGACTAA--AA-GTA--AGTGA
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            35248 31 +     62062 A--------------TA------TCCT----GAATAGA--TGAATGA--AG-GTA--ACTGA
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189277245 29 + 218635234 A--------------CA------TCCT----GAGT--A--TGACTGA--AG-GTA--AATGA
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        20005 30 -  13920577 A--------------TA------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                4259 19 +     20549 ----------------------------------T--A--TGACTGA--AG-ATA--AATGA
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               18483 44 +     45698 ATATATATATATATATA------TTCT----GAAT--A--TGACAGA--AG-GGA-AAAAGA
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      812837 29 +   1148477 G--------------TA------TTCT----GAAT--A--TGACTGA--AG-GTA--AATGA
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  63479 29 +     99546 G--------------TA------TTCT----GAAT--A--CGACTGA--AG-GTA--AATGA
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194013127 30 - 194193292 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-gta-aaatga
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                  1666 30 -      3104 A--------------TA------TCTT----GAAT--A--TGACTGA--AG-GGG-AAAAGC
i Tolypeutes_matacus.TolMat_scaffold_475685             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  140002 19 -    259118 ----------------------------------T--A--TGACTGA--AA-GTA--AATGA
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        30148 30 +     38948 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   23708 30 -     32910 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      5609 30 -     12939 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       5037 30 -     14244 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           46430 30 -     54611 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        4231 30 -     11566 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     6415 30 -     15592 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          5067 30 +     14371 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   3353 30 +     12481 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        3334 30 -     24393 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       8478 30 -     28054 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44663262 30 -  44834318 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       5574 30 +     13828 A--------------TG------TCCT----AAAT--G--TGATTGA--AG-GTA-AAATGA
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                  11035 10 +     90398 ----------------------------------------tgattga--a--gT--------
i Tragulus_javanicus.TraJav_scaffold_14717              I 12 C 0
s Trichechus_manatus.JH594618.1                          16091015 30 +  31416278 A--------------TA------TCCT----GAAT--A--TGACTGA--AG-GTA-AAATAG
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2802262 30 -   3938065 A--------------TA------TCCT----AGAT--G--TGactaa--aa-gta-aaatga
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                   11090 30 +     13056 A--------------TA------CCCT----AGAT--G--TGACTAA--AA-GTA-AAATGA
i Tupaia_tana.TupTan_flattened_line_68454               C 0 I 10
s Tursiops_truncatus.MRVK01000923.1                      69319209 28 -  96451834 a--------------ta------tcct----aaat--A--TGACTGA--A--GTA--AATGA
i Tursiops_truncatus.MRVK01000923.1                     I 2 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                    1939 29 +    136657 A--------------CA------TCCC----AAAT--A--TGACTGA--AG-GTA--AATGA
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 I 5
s Ursus_maritimus.KK498671.1                              6522698 31 +  28682327 A--------------TA------TCCT----GAACAGA--ACACTGA--AG-GTA--AGTGA
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                 10594 30 -     20643 A--------------TA------TCCT----GAAT--G--TGGCTGA--AG-GTA-AAATTA
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             30129 30 -     33872 A--------------TA------TCCT----GAAT--G--TGGCTGA--AG-GTA-AAATTA
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1530239 30 -   2331223 A--------------TA-----ACCCT----GAAT--A--TGACTGA--AA-GTA--AGTCA
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                146367 31 -    281493 A--------------TA------TCCT----GAACAGA--TGACTGA--AG-GTA--AGTGA
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       132713 30 -    134049 A--------------TA------TCTT----GAAT--A--TGACAGA--AG-GTA-TAATGT
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_202118                     2329 25 -      3360 A--------------TA------TCC--------T--A--TCACTGA--AG-GTA-TCTTG-
i Zapus_hudsonius.ZapHud_scaffold_202118                C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            3800 28 -     13665 A--------------TA------TCCT----GAAT--A--TGACTGA--A--GTA--AATGA
i Ziphius_cavirostris.ZipCav_flattened_line_60625       I 2 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Zalophus_californianus.ZalCal_flattened_line_4097        221654  0 -    227762 C
e Odobenus_rosmarus.KB229369.1                             686793  0 -   3126709 C
e Hylobates_pileatus_a.tarseq_592                             37267 2881 -     60944 I
e Tarsius_wallacei.k141_48636                               64696  0 +     65473 C
e Tarsius_lariang.k141_609102                               31387  0 +     42269 C
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Cephalopachus_bancanus.k141_702587                        12545  0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530  0 +    345090 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               18748 28 +    209709 ttt---tt-aa-ag-aa-----CTG------GATTTCTCACC--ATG
s Acinonyx_jubatus.LLWD01000356.1                         2041595 23 +   3721120 TCT--CCTTAA-AG-AA-----CT-------TG------ACT--GTG
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    119236 28 -    189883 TAT--CCTTGA-GG-TA-----C--------ACTTTCTCTAT--GTG
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10665462 23 +  23371972 TCT--CCTTAA-AG-AA-----CT-------TG------ACT--ATG
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7102411 23 -  16596857 TCT--CCTTAA-AG-AA-----CT-------TG------ACT--GTG
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_141108                   2589 28 -      7259 TCT--CAATGA-AG-AA-----C--------AGTCTGTCATT--GTG
i Allactaga_bullata.AllBul_scaffold_141108              C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   6634 30 -     60446 TTT--CTTTAA-AG-AA-----CTG------GATTTCTCACC--ATG
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         7348 30 -     29318 TTT--CTTTAA-AG-AA-----CTG------GATTTCTCACC--ATG
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         6286 30 +     38766 TTT--CTTTAA-AG-AA-----CTG------GATTTCTCACC--ATG
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          7244 30 -     80423 TTT--CTTTAA-AG-AA-----CTG------GATTTCTCACC--ATG
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              2192 30 +     19852 TCT--CTTTAC-GG-AA-----ACG------GATTTCTCACC--ATG
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                4412 30 -     12443 TCT--CTTTAC-GG-AA-----ACA------GATTTCTCACC--ATG
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                             1735 30 +      5070 TCT--CTTTAC-GG-AA-----ACG------GATTTCTCACC--ATG
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                 1482 30 -      1641 TCT--CTTTAT-GG-AA-----ACG------GATTTCTTACC--ATG
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          4221 30 -     24210 TCT--CTTTAC-GG-AA-----ACA------GATTTCTCACC--ATG
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_494922                              725 30 -      8325 TCT--CTTTAT-GG-AA-----ACG------GATTTCTTACC--ATG
i Alouatta_nigerrima.k141_494922                        C 0 C 0
s Alouatta_palliata.k141_405616                              6639 30 +     16794 TCT--CTTTAC-GG-AA-----ACG------GATTTCTCACC--ATG
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_347198                              668 30 +      9111 TCT--CTTTAC-GG-AA-----ACG------GATTTCTCACC--ATG
i Alouatta_puruensis.k141_347198                        C 0 C 0
s Alouatta_seniculus.k141_790278                             5916 30 -      9835 TCT--CTTTAT-GG-AA-----ACG------GATTTCTTACC--ATG
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3528653 18 +   4113121 CCC--CCTCAA-GG-AA-----C------------------C--ATG
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      394606 20 -    631301 TC-----TTAA-GG-AA-----GT-------TG------GGT--ATG
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             5881 18 +     55446 CCT--CCTTAA-GG-AA-----C------------------C--ATG
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 67526 30 +     78111 TCT--CTTTAT-AG-AA-----CTG------GATTTCTCACC--GTG
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                           10467 30 +     22701 TCT--CTTTAT-AG-AA-----CTG------GATTTCTCACC--GTG
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5754436 30 +   9889416 TCT--CTTTAT-AG-AA-----CTG------GATTTCTCACC--GTG
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                            11014 30 -    104377 TCT--CTTTAT-AG-AA-----CTC------GATTTCTCACC--GTG
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                              11043 30 +     23246 TCT--CTTTAT-AG-AA-----CTC------GATTTCTCACC--GTG
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     3673 20 +     11424 TCT--CCTTGA-GG-AA-----C--------TGTTT--------G--
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        7625 30 +      9265 CCT--CTTTAA-GG-AA-----GTA------CATTTCTCACC--ATG
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                12896 23 -     29036 TCT--CCTTAA-GG-AA-----CT-------TG------GGT--ATG
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9544326 30 +  39197703 TCT--CTTTAC-GG-AA-----CCG------GATTTCTCACC--GTG
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             65600 30 +     85812 TCT--CTTTAC-GG-AA-----CCG------GATTTCTCATC--GTG
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                16610 30 +     89302 TCT--CTTTAC-GG-AA-----CCG------GATTTCTCACC--GTG
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             21114 30 -     58268 TCT--CTTTAC-GG-AA-----CCG------GATTTCTCACC--GTG
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             69108 30 +    119057 TCT--CTTTAC-GG-AA-----CCG------GATTTCTCACC--GTG
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              11077 30 -     25888 TCT--CTTTAC-GG-AA-----CCG------GATTTCTCACC--ATG
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                12151 29 -     16375 TCT--CTTTAA-GG-AA------TC------TGTTTCTCACA--ATG
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               5767 29 +      6337 TCT--CTTTAA-GG-AA------TC------TGTTTCTCACA--ATG
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26386053 23 +  51448160 TCC--CCTTAA-GG-AA-----CC-------TG------ACt--gtg
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                       11226 23 -     13118 TCC--CCTTAA-GG-AA-----CC-------TG------ACt--gtg
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   50645 18 -     72089 CCC--CCTTAA-GG-AA-----C------------------C--ATG
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   305577 18 -   6870073 CTC--CCTTAA-GG-AA-----C------------------C--ATG
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22959683 18 + 161108492 CTC--CCTTAA-GG-AA-----C------------------C--ATG
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     421862 18 +    998990 CTC--CCTTAA-GG-AA-----C------------------C--ATG
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22668335 18 + 158972876 CTC--CCTTAA-GG-AA-----C------------------C--ATG
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               677199 18 +   1914593 CCC--CCTTAA-GG-AA-----C------------------C--ATG
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               118946 30 -    171031 TCT--CTTTAT-GG-AA-----CCG------GATTTCTCACC--GTG
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 17966 30 +    125063 TCT--CTTTAC-GG-AA-----CCG------GATTTCTCACC--GTG
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                20013 30 -    216513 TCT--CTTTAT-GG-AA-----CCG------GATTTCTCACC--GTG
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       12556 30 -    134917 TCT--CTTTAT-GG-AA-----CCG------GATTTCTCACC--GTG
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3225161 22 -   8989139 TCC--CCTTAA-GG-AA-----CT-------TG------ACC--GT-
i Camelus_bactrianus.KN276303.1                         C 0 I 1
s Camelus_dromedarius.KN271192.1                           402861 22 -  15254737 TCC--CCTTAA-GG-AA-----CT-------TG------ACC--GT-
i Camelus_dromedarius.KN271192.1                        C 0 I 1
s Camelus_ferus.KB016973.1                                2978599 22 +   6889770 TCC--CCTTAA-GG-AA-----CT-------TG------ACC--GT-
i Camelus_ferus.KB016973.1                              C 0 I 1
s CanFam4.chr31                                          11528314 25 +  39901454 TCT--CCTTAA-AG-AA-----CT-------TG------ACTTTGTG
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   23288 25 +     87036 TCT--CCTTAA-AG-AA-----CT-------TG------ACTTTGTG
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11275211 25 -  35597290 TCT--CCTTAA-AG-AA-----CT-------TG------ACTTTGTG
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11097708 25 +  39895921 TCT--CCTTAA-AG-AA-----CT-------TG------ACTTTGTG
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16464493 25 -  44759192 TCT--CCTTAA-AG-AA-----CT-------TG------ACTTTGTG
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21336086 18 + 157394656 CCC--CCTCAA-GG-AA-----C------------------C--ATG
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135714439 18 - 157403528 CCC--CCTCAA-GG-AA-----C------------------C--ATG
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_1011243                  372 28 +      1208 TCT--CCTTGA-AG-AA-----C--------CTTTTCTTGGT--ATG
i Capromys_pilorides.CapPil_scaffold_1011243            C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               63892 23 +     67245 TCT--CCTTAA-GG-AA-----CT-------TG------GGT--GTG
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_1326                     1160 28 -    202837 TCT--CCATGA-GG-AG-----C--------TATTTATCAAT--GTG
i Castor_canadensis.CasCan_scaffold_1326                C 0 I 6
s Catagonus_wagneri.CatWag_scaffold_1305                   164898 23 -    276539 TCC--CCTTAA-GG-AA-----CT-------TG------ACC--ATA
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 I 3
s Cavia_aperea.AVPZ01000278.1                            15790897 28 -  24422027 NNN--NNNNNN-NN-NN-----N--------NNNNNNNNNNN--NNN
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15802842 28 -  24440124 CCT--GTTTCA-GG-AA-----C--------TATTTCTTGGT--ATG
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       181014 28 +    436027 CCT--GTTTCA-GG-AA-----C--------TATTTCTTGGT--ATG
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18896681 30 -  29618158 TCT--CTTTAT-GG-AA-----CCG------GATTTCTCACC--ATG
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                13331 30 -     26817 TCT--CTTTAT-GG-AA-----CCG------GATTTCTCACC--ATG
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                17575 30 +     25043 TCT--CTTTAT-GG-AA-----CCG------GATTTCTCACC--ATG
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4370133 23 +   7569818 TCT--CCTTGA-GG-AA-----CT-------TG------Acc--atg
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_171732          290 23 +      8380 TCT--CCTTGA-GG-AA-----CT-------TG------ACC--ATG
i Ceratotherium_simum_cottoni.CerCot_scaffold_171732    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6560574 30 +   6739814 ttt--ctttaa-ag-AA-----CTG------GATTTCTCACC--ATG
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      32051 30 +     60454 TTT--CTTTAA-AG-AA-----CTG------GATTTCTCACC--ATG
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          7255 30 -     21101 TTT--CTTTAA-AG-AA-----CTG------GATTTCTCACC--ATG
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         64565 30 -    107033 TTT--CTTTAA-AG-AA-----CTG------GATTTCTCACC--ATG
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        7425 30 -     17608 TTT--CTTTAA-AG-AA-----CTG------GATTTCTCGCC--ATG
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          4593 30 +     45019 TTT--CTTTAA-AG-AA-----CTG------GATTTCTCACC--ATG
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           4869 30 +     15177 TTT--CTTTAA-AG-AA-----CTG------GATTTCTCACC--ATG
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          7475 30 +     16677 TTT--CTTTAA-AG-AA-----CTG------GATTTCTCACC--ATG
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           29671 30 +     35983 TTT--CTTTAA-AG-AA-----CTG------GATTTCTCGCC--ATG
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11996196 30 +  12117833 TTT--CTTTAA-AG-AA-----CTG------GATTTCTCACC--ATG
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46483178 30 +  46592721 TTT--CTTTAA-AG-AA-----CTG------GATTTCTCGCC--ATG
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                       1289 30 -     27215 TTT--CTTTAA-AG-AA-----CTG------GATTTCTCACC--ATG
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       7489 30 +     35577 TTT--CTTTAA-AG-AA-----CTG------GGTTTCTCACC--ATG
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        7283 30 -     25661 TTT--CTTTAA-AG-AA-----CTG------GATTTCTCGCC--ATG
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        7455 30 -     17744 TTT--CTTTAA-AG-AA-----CTG------GCTTTCTCACC--ATG
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        26824 30 +     37128 TTT--CTTTAA-AG-AA-----CTG------GATTTCTCACC--ATG
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           5846 25 -      6963 TCA--CCTTAA-GG-AG-----CT-----TTTG------ACC--ATG
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 I 6
s Cheirogaleus_major.k141_1157592                           64367 29 -     68416 CCT--CTTTAA-GG-AA------TC------TGTTTCTCACC--ATG
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_854352                             669 29 +     27737 CCT--CTTTAA-GG-AA------TC------TGTTTCTCACC--ATG
i Cheirogaleus_medius.k141_854352                       C 0 C 0
s Cheracebus_lucifer.k141_619653                            10637 30 -     18223 TCT--CTTTAA-GG-AA-----TCG------TATTTCTCACT--GTG
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              2378 30 +    188999 TCT--CTTTAA-GG-AA-----TCG------TATTTCTCACT--GTG
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           46677 30 +     57117 TCT--CTTTAA-GG-AA-----TCG------TATTTCTCACT--GTG
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          51357 30 +     54541 TCT--CTTTAA-GG-AA-----TCG------TATTTCTCACT--GTG
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15965524 28 +  43084221 TCT--CCTTGA-GG-AA-----C--------TGTTTCTTGGT--ATG
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         76158 30 +    196370 TCT--CTTTAC-GG-AA-----CCG------GATTTCTCACC--GTG
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          20339 30 +     40510 TCT--CTTTAC-GG-AA-----CCG------GATTTCTCACC--GTG
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15145009 30 -  15256731 TTT--CTTTAA-AG-AA-----CTG------GATTTCTCACC--ATG
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      39473 30 -     53260 TTT--CTTTAA-AG-AA-----CTG------GATTTCTCACC--ATG
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101150032 30 + 101219884 ttt--ctttaa-ag-AA-----CTG------GATTTCTCACC--ATG
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                19874 23 -     21363 TTG--CTTTAA-GG-AA-----CT-------TG------ACC--ATG
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           765178 23 +    964067 TTG--CTTTAA-GG-AA-----CT-------TG------ACC--ATG
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_304221              2802 23 -      7053 TTTT--CTTAA-G-AGA-----CT-------TG------GCC--ATG
i Chrysochloris_asiatica.ChrAsi_scaffold_304221         C 0 C 0
s Colobus_angolensis.KN985967.1                          10889803 30 +  10971483 ttt--ctttaa-ag-AA-----CTG------GATTTCTCACC--ATG
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147667731 30 + 156195979 TTT--CTTTAA-AG-AA-----CTG------GATTTCTCACC--ATG
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            19714 30 +     23629 TTT--CTTTAA-AG-AA-----CTG------GATTTCTCACC--ATG
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60624152 16 +  78930452 ---------AA-GG-AA-----CT-------TG------ACT--Gtg
i Condylura_cristata.JH655880.1                         I 4 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         4546 23 -      5782 TCT--CCTTCA-GG-AA-----CT-------TG------GGC--ATG
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 284141 28 -    399297 TCT--CCTTAA-GG-TA-----C--------ACGGTCTCTAT--GTG
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53036427 28 +  72327488 TAT--CCTTGA-GG-TA-----C--------ACTTTCTCTAT--GTG
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              4031 23 -     22648 TCTT--TTTAT-GA-AA-----CT-------TG------ACT--GTG
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            59531 23 -     70449 TCT--CCTTAA-AG-AA-----CC-------TG------ACC--ATG
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  216274 28 -    956709 TCTT--GTTGA-AG-AA-----C--------TATTTCTCTAA--ATG
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 37246 33 -     67205 TCT--CCTTGA-AG-AACTGAAC--------TGCTTCTGGGT--ATG
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                22093 28 +     26546 TCT--CTTTGA-GG-AA-----C--------TGTTTTTTGGT--ATG
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             63237 28 -    236241 TGT--CTTTGG-GA-AA-----C--------TGTTTCTTGGT--GTg
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          186895 25 -   6883506 TCA--CCATAA-GG-AA-----CT-----TTTG------ATC--ATG
i Dasypus_novemcinctus.JH568778.1                       C 0 I 6
s Daubentonia_madagascariensis.ctg11                     16850313 30 +  31942871 CCT--CTTTAA-AG-AA-----CTA------TGTTTCTCACC--ATG
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80042649 19 -  96802777 TCC--CCTTAA-GG-AA-----CC-----------------t--gtg
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18703110 23 -  18957592 TCT--CCTTAA-GG-AA-----CT-------TG------GGT--GTG
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 328532 23 +    993696 TCT--CCTTGA-GG-AA-----CT-------TG------ACC--Acg
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   9166 23 +    151128 TCT--CCTTGA-GG-AA-----CT-------TG------ACC--ATG
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   160998 28 +    228994 TCT--CCTTGA-GG-AA-----A--------TGTTTCTTGGT--ATG
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3661431 28 +   4240102 TCT--CCCTAA-GA-AA-----A--------TGTTTTTCACT--GGT
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  3805 28 -     11986 TCT--CCCTAA-GA-AA-----A--------TGTTTTTCACT--GGT
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                41800 28 -     73477 TCA--CTTTGA-TG-AA-----C--------TGTTTCTTGGT--ATG
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           23005070 25 -  44670279 TTTTTTCTTAA--GAAA-----CT-------TT------ATT--GTA
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 15256 23 +     24177 TCT--CCTTAA-TG-AA-----TT-------Tg------agc--ata
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1498601 18 +   1727528 CCC--CATTAA-GG-AA-----C------------------C--ATG
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7836585 24 +  15467074 TCT--CATTAA-GGAAT-----TT-------GC------TCC--AGG
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        245137 28 -    369425 TCT--CTTTGA-GG-TA-----C--------ACTTTCTCTAT--GTG
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01076532.1                           1489 28 +      9159 TCT--CCTTGA-GG-TA-----C--------ACTTTTTCTAt--gtg
i Ellobius_talpinus.LOJH01076532.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85879458 23 +  99434291 TCT--CCTTAA-AG-AA-----CT-------TG------ACT--GTG
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4710870 23 +   6522550 TCT--CCTTAA-GT-AA-----CT-------TG------AGT--GTG
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5858395 23 -   7175178 TCT--CCTTAA-GG-AA-----CT-------TG------ACc--atg
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13356881 23 +  41866177 TCT--CCTTAA-GG-AA-----CT-------TG------ACc--atg
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          18371 23 +     92910 TCT--CCTTAA-GG-AA-----CT-------TG------ACc--atg
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11543544 19 +  16010500 TCTT--CTTTAGGA-AA-----CT-------GG-------------G
i Erinaceus_europaeus.JH835290.1                        C 0 I 335
s Erythrocebus_patas.Contig8                             48782042 30 -  48907691 TTT--CTTTAA-AG-AA-----CTG------GATTTCTCACC--ATG
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          320896 23 +    330699 TCC--CCTTAA-GG-AA-----CC-------TG------ACT--GTG
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             67352 19 +     89355 TCC--CCTTAA-GG-AA-----CC-----------------T--GTG
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                             10431 29 +     13586 CCT--CTTTAA-GG-AA------TC------TGTTTCTCACC--ATG
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_1015201                              3690 29 -      4292 CCT--CTTTAA-GG-AA------TC------TTTTTCTCACC--ATG
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            16827 29 +     36558 CCT--CTTTAA-GG-AA------TC------TGTTTCTCACC--ATG
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            13149 29 +     60246 CCT--CTTTAA-GG-AA------TC------TTTTTCTCACC--ATG
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                16634 29 +    109717 CCT--CTTTAA-GG-AA------TC------TGTTTCTCACC--GTG
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 4617 29 -     19505 CCT--CTTTAA-GG-AA------TC------TTTTTCTCACC--ATG
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                21292 29 +     27497 CCT--CTTTAA-GG-AA------TC------TGTTTCTCACC--ATG
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           23748 29 +     26808 CCT--CTTTAA-GG-AA------TC------TGTTTCTCACC--ATG
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                38480 29 +     46535 CCT--CTTTAA-GG-AA------TC------TTTTTCTCACC--ATG
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              21221 29 -     29447 CCT--CTTTAA-GG-AA------TC------TTTTTCTCACC--ATG
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129901168 23 - 159252932 TCT--CCTTAA-AG-AA-----CT-------TG------ACT--GTG
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129288145 23 - 158578461 TCT--CCTTAA-AG-AA-----CT-------TG------ACT--GTG
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 29335 23 +     52776 TCT--CCTTAA-AG-AA-----CT-------TG------ACT--GTG
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13897470 22 -  19261668 tCT--CCCTGA-AG-AA-----C--------------TTACT--ATG
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     216483 28 -    847004 TCT--CTTTAA-GG-AA-------G------TGTTTCTCACC--ATG
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           18845 28 -     43889 TCT--CTTTAA-GG-AA-------G------TGTTTCTCACC--ATG
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          15986 28 +     27357 TTT--CTTTAA-GG-AA-------G------TGTTTCGCACC--ATG
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               160754 30 +    324696 TCT--CCTGAA-GG-AA-----CT-A-----TGTTTCTCATC--ATG
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    188375 18 -    189561 CCCT--CTTAA-GG-AA-----C------------------C--ATG
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           17661 28 -     18683 CCT--CCTTGA-AG-AA-----C--------TGTTTCTCATT--GTG
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                              10445 30 -     14630 TTT--CTTTAA-AG-AA-----CTG------GATTTCTCACC--ATG
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119657545 30 - 195582420 ttt--ctttaa-ag-AA-----CTG------GATTTCTCACC--ATG
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   80983 28 +    118900 TCT--CCTTGA-AG-AA-----T--------TGTTTCTCACT--GTG
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         7223 29 +     10286 CCT--CTTTAA-GG-AA------TC------TGTTTCTCACC--ATG
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             5704 29 -     11661 CCT--CTTTAA-GG-AA------TC------TGTTTCTCACC--ATG
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                            11028 29 +     56096 CCT--CTTTAA-GG-CA------TC------TGTTTCTCACC--ATG
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        34277 29 -     42470 CCT--CTTTAA-GG-AA------TC------TGTTTCTCACC--ATG
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        50903 29 -     54384 CCT--CTTTAA-GG-AA------TC------TGTTTCTCACC--ATG
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              24649 23 +     53719 TCT--CCTTAA-AG-AA-----CT-------TA------ACA--GTG
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                35472 18 -     91191 CAC--CCTTAA-GG-AA-----C------------------C--ATG
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2561800 22 +  31725842 TCT--CCTTGA-GG-AA-----C--------------TTACT--GTG
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               64231 23 +     73687 TTT--CCTTAG-AG-AA-----CT-------TG------ACC--ATG
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              152719 23 +    277961 TCC--CCTTAA-GG-AA-----CT-------TG------ACT--ATG
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      286188 23 -    477199 TTT--CCTTTA-GG-AA-----CT-------TG------AAT--gtg
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959               3461 23 +     26078 TTT--CCTTTA-GG-AA-----CT-------TG------AAT--GTG
i Hipposideros_galeritus.HipGal_scaffold_52959          C 0 C 0
s Hoolock_leuconedys.ctg79                                     10370 30 -   7690867 TTT--CTTTCA-AG-AA-----CTG------GATTTCTCACC--ATG
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 25085 23 -     67322 TCT--CCTTAA-AG-AA-----CT-------TG------ACC--ATG
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           22442 28 -    119109 TCT--CTTTGA-GT-AA-----C--------AGTTTCTTCTT--ATG
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_1816750                             2941 30 +      3202 TTT--CTTTCA-AG-AT-----CTG------GATTTCTCACC--ATG
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1136966                               950 30 +      9785 TTT--CTTTCA-AG-AA-----CTG------GATTTCTCACC--ATG
i Hylobates_agilis.k141_1136966                         C 0 C 0
s Hylobates_klossii.k141_468230                              4430 30 +      5464 TTT--CTTTCA-AG-AA-----CTG------GATTTCCCACC--ATG
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14629776 30 -  25970782 TTT--CTTTCA-AG-AA-----CTG------GATTTCTCACC--ATG
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            2328 30 +      4161 TTT--CTTTCA-AG-AT-----CTG------GATTTCTCACC--ATG
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                    10710 27 +     22540 TC---CCTTGA-GG-AA-----C--------TGTTTCTTGCT--ATG
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7131547 28 +  13083262 TAT--CCTTGA-GG-AA-----T--------tgtttctcatt--gat
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   2763 28 +      3484 CCT--CTTTAA-GG-AA------TG------TGTT-CTCACC--ATG
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              14875 23 +     17520 TCC--CCTTAA-GG-AA-----CC-------TG------ACT--GTG
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8580337 28 +  11848649 TCT--CAATGA-GG-AA-----C--------AGTCTCTCATT--GTG
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               29492 23 +     37189 TCC--CCTTAA-AG-AA-----CC-------TG------ACT--GTG
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          55198 30 -    147782 TCT--CTTTAC-GG-AA-----CTG------GATTTCTCACC--ATG
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    7421 23 +     26176 TCT--CCTTAA-GT-AA-----CT-------TG------AGT--GTG
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258412581 29 - 285822530 CCT--CTTTAA-TG-AA------TT------TGTTTCTCACC--ATG
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        29907 29 +     39228 CCT--CTTTAA-GG-AA------TC------TGTTTGTCATC--ATG
i Lepilemur_ankaranensis.k141_884009                    C 0 I 8
s Lepilemur_dorsalis.k141_134267                            59271 29 +     63517 CCT--CTTTAA-GG-AA------TC------TGTTTGTCATC--ATG
i Lepilemur_dorsalis.k141_134267                        C 0 I 8
s Lepilemur_ruficaudatus.k141_574529                        37653 29 -     38897 CCT--CTTTAA-GG-AA------TC------TGTTTGTCATC--ATG
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      3697 29 -     13103 CCT--CTTTAA-GG-AA------TC------TGTTTGTCATC--ATG
i Lepilemur_septentrionalis.k141_710646                 C 0 I 8
s Leptonychotes_weddellii.KB714749.1                      3093719 19 -   3498232 TCT--CCTTAA-AG-AA-----AT-------T------------GTG
i Leptonychotes_weddellii.KB714749.1                    I 311 C 0
s Lepus_americanus.LepAme_scaffold_62849                    22183 30 +     22452 TCT--CCTTAA-GA-AA-----CT---C---TGTTTCTCCCT--GTG
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            141800 23 +   3060487 TCC--CCTTAA-GG-AA-----CC-------TG------ACt--gtg
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19253663 30 +  19376315 TTT--CTTTAA-AG-AA-----CTG------GATTTCTCACC--ATG
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           16446 30 +     84689 CCT--CTTTAA-AG-AA-----CTA------TGTTTCTCACC--ATG
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3784179 30 +   6799190 CCT--CTTTAA-AG-AA-----CTA------TGTTTCTCACC--ATG
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20599971 23 -  62548349 TTT--CCTTAA-AG-AA-----CA-------TG------ACC--gtg
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11097164 25 +  39895028 TCT--CCTTAA-AG-AA-----CT-------TG------ACTTTGTG
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             25412 30 +     74745 TTT--CTTTAA-AG-AA-----CTG------GATTTCTCACC--ATG
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12711875 30 +  12821369 TTT--CTTTAA-AG-AA-----CTG------GATTTCTCACC--ATG
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                4448 30 -     26467 TTT--CTTTAA-AG-AA-----CTG------GATTTCTCACC--ATG
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           52319 30 +     63263 TTT--CTTTAA-AG-AA-----CTG------GATTTCTCACC--ATG
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 4429 30 -     26361 TTT--CTTTAA-AG-AA-----CTG------GATTTCTCACC--ATG
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_2667654                                 732 30 -      5626 TTT--CTTTAA-AG-AA-----CTG------GATTTCTCACC--ATG
i Macaca_leonina.k141_2667654                           C 0 C 0
s Macaca_maura.k141_251854                                  50848 30 -     79256 TTT--CTTTAA-AG-AA-----CTG------GATTTCTCACC--ATG
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196040946 30 + 196197964 ttt--ctttaa-ag-AA-----CTG------GATTTCTCACC--ATG
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11451116 30 +  11645122 ttt--ctttaa-ag-AA-----CTG------GATTTCTCACC--ATG
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   9802 30 -     46448 TTT--CTTTAA-AG-AA-----CTG------GATTTCTCACC--ATG
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                7463 30 -     13212 TTT--CTTTAA-AG-AA-----CTG------GATTTCTCACC--ATG
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 21145 30 -     55006 TTT--CTTTAA-AG-AA-----CTG------GATTTCTCACC--ATG
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43846567 30 +  43892939 TTT--CTTTAA-AG-AA-----CTG------GATTTCTCACC--ATG
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               22429 30 -     24607 TTT--CTTTAA-AG-AA-----CTG------GATTTCTCACC--ATG
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               9799 30 -     27140 TTT--CTTTAA-AG-AA-----CTG------GATTTCTCACC--ATG
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                703867 23 +    802869 TCT--CCTTAA-GG-AA-----CT-------TG------AGC--ATA
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43442832 30 -  43563597 TTT--CTTTAA-AG-AA-----CTG------GATTTCTCACC--ATG
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4455631 30 -   4543643 TTT--CTTTAA-AG-AA-----CTG------GATTTCTCACC--ATG
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            154150 23 +    252755 TCT--GTTTAA-GG-AA-----CT-------TG------ACa--gtg
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             41748 23 +     58827 TCT--CTTTAA-GG-AA-----CT-------TG------Aca--gtg
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36879413 28 +  64221397 TAT--CCTTGA-GG-AA-----T--------tgtttctcatt--gat
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       67669 23 -    234502 CCT--CCTTGG-GG-AA-----CC-------TG------AGC--GTG
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             8553 23 -     87323 TCT--CCTTAA-AG-AA-----CT-------TG------ACT--GTG
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 3362 28 +    115071 TAT--CATTGG-GG-TA-----C--------ACTTTCTCTAT--GTT
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1053001 28 -  26018355 TCT--CCTTGA-GG-TA-----C--------ACTTTCTCTAT--GTG
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    4463 23 -     12939 TCC--CCTTAA-GG-AA-----CC-------TG------ACT--GTG
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16515622 29 +  47401472 CCT--CTTTCA-GG-AA------TC------TGTTTATCATC--ATG
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  46685 24 -     48017 TATT--TTGGG-GGAAA-----TG-------TT------TTT--GTA
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               26847 23 -     32043 TCT--CCTTAA-GG-AA-----CT-------TG------GGT--GTG
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22825973 28 -  98408828 TCT--CTTTGA-GG-TA-----C--------ACTTTCTTTAT--GCG
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8215200 23 +  10048721 TCT--CCTCAA-GG-AA-----CT-------TG------ACT--GTG
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            39659 23 +     45743 TCT--CCTCAA-GG-AA-----CT-------TG------ACT--GTG
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         7381 30 +     29742 TTT--CTTTAA-AG-AA-----CTG------GATTTCTCACC--ATG
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        19118 19 -    104932 TCT--CCTTAA-AG-AA-----AT-------T------------GTG
i Mirounga_angustirostris.MirAng_flattened_line_8852    I 214 C 0
s Mirza_zaza.k141_593947                                     6317 29 -     12809 CCT--CTTTCA-GG-AA------TC------TGTTTATCATC--ATG
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 152242 19 +    154973 TCC--CCTTAA-GG-AA-----CC-----------------T--GTG
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                165362  8 +    265003 TCT--CCTTA-------------------------------------
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 I 10
s Moschus_moschiferus.MosMos_scaffold_78805                  9048 18 -     19904 CCC--CCTTAA-GG-AA-----C------------------C--ATG
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  152378 23 -    168139 TCT--CCTTAA-AG-AA-----CT-------TA------ACA--GTG
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          26189 23 -    100666 TCT--CCTTAA-GT-AA-----CA-------TG------AGT--GTG
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70773243 28 +  92629107 TGT--CCTTGA-GG-AA-----A--------ACTTTCCCTAT--GTG
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75495307 28 +  98207768 TCT--CCATGA-GG-TA-----C--------ACTTTCCCTAT--GTG
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67562034 28 +  89017189 TCT--CCTTGA-GG-TA-----C--------ACTTTCTCTAT--GTG
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74338015 28 +  97876770 TCT--CCTTGA-GG-TA-----C--------ACTTTTCCTAT--GTG
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             16051 24 +     98495 ------CTTAA-AG-AA-----C--------GGTTTCAAAAT--TAT
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 1 C 0
s Mustela_putorius.JH417978.1                             4430656 23 -  28371801 TCT--CCTTGA-AG-AA-----CT-------TG------ACT--GTG
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     97005 28 -    117718 TCTT--CTGGA-AG-AA-----C--------TTTTTCTTGGT--ATG
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               973203 23 +   8389877 TCT--CCTTAA-GT-AA-----CT-------TG------AG-TG-TG
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5024281 21 +   6462685 TCT--CCTTAA-GT-AA-----CT-------TG------AC----TG
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3470710 19 -   3747815 TCT--CCTTAA-GT-AA-----CT-------TG------AG------
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        15937 23 +     66751 TCT--CCTTAA-GT-AA-----CT-------TG------AG-TG-TG
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_12795               294 23 -     87886 TCA--CTTTAA-AG-AA-----CT-------TG------ACT--GTG
i Myrmecophaga_tridactyla.MyrTri_scaffold_12795         I 80 C 0
s Nannospalax_galili.KL201303.1                            125718 28 +    362372 TTT--CCTTAA-GT-TA-----C--------TACTTCTCACT--GTg
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                              11642 30 +     48152 TTT--CTTTCA-AG-AA-----CTG------GATTTCTCACC--ATG
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4492513 19 -  14209539 TCT--CCTTAA-AG-AA-----AT-------T------------GTG
i Neomonachus_schauinslandi.NINY01007774.1              I 218 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3956833 19 -   4490290 TCC--CCTTAA-GG-AA-----CC-----------------t--gtg
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  52676 23 +     94413 TCT--CCTTAA-GG-AA-----CT-------TG------AGT--GTG
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_762468                            1447 30 -      2755 TTT--CTTTCA-AG-AA-----CTG------GATTTCTCACC--ATG
i Nomascus_annamensis.k141_762468                       C 0 C 0
s Nomascus_concolor.k141_256540                              8057 30 -      8966 TTT--CTTTCA-AG-AA-----CTG------GATTTCTCACC--ATG
i Nomascus_concolor.k141_256540                         C 0 C 0
s Nomascus_gabriellae.k141_1400361                           1998 30 -      2203 TTT--CTTTCA-AG-AA-----CTG------GATTTCTCACC--ATG
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_453                             7310 30 +     12787 TTT--CTTTCA-AG-AA-----CTG------GATTTCTCACC--ATG
i Nomascus_siki_b.tarseq_453                        C 0 C 0
s Nomascus_siki_a.k141_421408                                  1912 30 +     16235 TTT--CTTTCA-AG-AA-----CTG------GATTTCTCACC--ATG
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                40034 25 +   3668941 TCT--CCTTAA-AG-AA-----CT-------TG------ACTTTGTG
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65573221 30 -  95554990 CCT--CTTTAA-GG-AA-----CTA------CGTTTCTCACC--ATG
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_6040852                             857 30 +      1868 CCT--CTTTAA-GG-AA-----CTA------CGTTTCTCACC--ATG
i Nycticebus_coucang.k141_6040852                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65681400 30 +  89412551 CCT--CTTTAA-GG-AA-----CTA------CGTTTCTCACC--ATG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            5001241 30 -  23139505 TCT--CTTTAT-TG-Aa-----ac------ctgtttttaatt--ttg
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3692320 28 +  10294119 TCT--CCTTGA-AG-AA-----C--------TGTTTCTTGGT--GTG
i Octodon_degus.JH651621.1                              C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1086032 18 +   1425656 CCC--CATTAA-GG-AA-----C------------------C--ATG
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         44105 18 +     78940 CCCT--CTTAA-GG-AA-----C------------------C--ATG
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  131779 28 +    145789 TCT--CCTTGA-GG-TA-----C--------ACTTTCTTTAT--GTG
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  44713 28 +     62360 TCT--CCTTGA-TG-TA-----C--------ACTTTCTCTCT--GTG
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7230507 19 -   7562323 TCC--CCTTAA-GG-AA-----CC-----------------t--gtg
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_371885              1707 24 +      3658 TTT--CCTTAA-GAAAA-----CT-------TT------ATC--ATG
i Orycteropus_afer.OryAfe_flattened_line_371885         C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141885199 30 + 163896628 TCT--CCTTAA-Ga-aa-----ct------ctgtttctccct--gtg
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      317171 25 -    505867 TCT--CCTTAA-AG-AA-----CT-------TG------ACTTTGTG
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        6344 28 -     53940 TCT--CTTTAA-GG-AA-------G------TGTTTCTCACC--ATG
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18014310 28 -  38779656 TCT--CTTTAA-GG-AA-------G------TGTTTCTCACC--ATG
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134085254 18 - 275406953 CAC--CCTTAA-GG-AA-----C------------------C--ATG
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      86500 18 +    140051 CCC--CCTCAA-GG-AA-----C------------------C--ATG
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127579724 30 - 205426864 ttt--ctttaa-ag-AA-----CTG------GATTTCTCACC--ATG
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120156884 30 - 196562556 ttt--ctttaa-ag-AA-----CTG------GATTTCTCACC--ATG
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  41935 23 +    295523 TCT--CCTTAA-AG-AA-----CC-------TG------ACT--GTG
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3645749 23 +  18214204 TCT--CCTTAA-AG-AA-----CT-------TG------ACT--GTG
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5035386 23 -   6340057 TCT--CCTTAA-AG-AA-----CT-------TG------ACT--GTG
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1074139 18 -   1292953 CCC--CCTTAA-GG-AA-----C------------------C--ATG
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188161624 30 - 188283584 ttt--ctttaa-ag-AA-----CTG------GATTTCTCACC--ATG
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              4714 30 +     25005 TTT--CTTTAA-AG-AA-----CTG------GATTTCTCACC--ATG
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47518996 30 +  47705337 TTT--CTTTAA-AG-AA-----CTG------GATTTCTCACC--ATG
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 72987 30 -    104429 TTT--CTTTAA-AG-AA-----CTG------GATTTCTCACC--ATG
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   11519 30 +     14967 TTT--CTTTAA-AG-AA-----CTG------GGTTTCTCACC--ATG
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 7384 30 -      7628 TTT--CTTTAA-AG-AA-----CTG------GATTTCTCACC--ATG
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    123406 23 -    135482 TGTT--CTTAA-AG-AA-----CT-------TG------ACT--GTG
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          12006 30 -     23713 CCT--CTTTAA-GG-AA-----CTG------CATTTCTCACC--ATG
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           13157 30 +     61070 CCT--CTTGAA-GG-AA-----CTA------CATTTCTCACC--ATG
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       3427 28 +     49596 TCT--CCCTAA-GG-AA-----G--------TTTTTCTCACT--GCT
i Perognathus_longimembris.PerPac_flattened_line_19359  I 8 C 0
s Peromyscus_maniculatus.KI615458.1                       2840526 28 -   3366660 TCT--CCTTGA-GG-TA-----C--------ACTTTCTCTCT--GTG
i Peromyscus_maniculatus.KI615458.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    18154 28 -     36578 CCT--CCTTGA-GA-AA-----C--AACCTA------TTCCT--ATG
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              4972 19 +      8220 TCC--CCTTAA-GG-AA-----CC-----------------T--GTG
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Piliocolobus_badius.k141_1987485                           5182 30 -      5908 TTT--CTTTAA-AG-AA-----CTG------GATTTCTCACC--ATG
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       5801 30 -     17985 TTT--CTTTAA-AG-AA-----CTG------GATTTCTCACC--ATG
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            5168 30 +      7694 TTT--CTTTAA-AG-AA-----CTG------GATTTCTCACC--ATG
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26743651 30 +  26888534 ttt--ctttaa-ag-AA-----CTG------GATTTCTCACC--ATG
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306           101434 22 +    112873 TCT--CC-TAA-GT-AA-----CT-------TG------AGT--ATG
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990          11462 23 +     21690 TCC--CCTTAA-GG-AA-----CC-------TG------ACT--GTG
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       27289 30 +     44506 TCT--CTTTAA-GG-AA-----TCG------GATTTCTCACT--GTG
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        27502 30 +     67491 TCT--CTTTAA-GG-AA-----TCG------GATTTCTCACT--GTG
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      17741 30 -     98129 TCT--CTTTAA-GG-AA-----TCG------GATTTCTCACT--GTG
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     27342 30 +    147771 TCT--CTTTAA-GG-AA-----TCG------GATTTCTCACT--GTG
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         3977 30 -     43940 TCT--CTTTAA-GG-AA-----TCG------GATTTCTCACT--GTG
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          8060 30 -     55515 TCT--CTTTAA-GG-AA-----TCG------GATTTCTCACT--GTG
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         27414 30 +    152463 TCT--CTTTAA-GG-AA-----TCG------GATTTCTCACT--GTG
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       5221 30 -    119457 TCT--CTTTAA-GG-AA-----TCA------GATTTCTCACT--GTG
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         17136 30 +    134592 TCT--CTTTAA-GG-AA-----TCG------GATTTCTCACT--GTG
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          27724 30 -     75465 TCT--CTTTAA-GG-AA-----TCG------GATTTCTCACT--GTG
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              192355 30 -    373494 ttt--ctttaa-ag-AA-----CTG------GATTTCTCACC--ATG
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19813004 30 +  19899266 TTT--CTTTAA-AG-AA-----CTG------GATTTCTCACC--ATG
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               8924 30 -     15069 TTT--CTTTCA-AG-AA-----CTG------GATTTCTCACC--ATG
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              9039 30 +     14865 TTT--CTTTCA-AG-AA-----CTG------GATTTCTCACC--ATG
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                5335 23 -      9567 TTT--CCTTAA-AG-AA-----CT-------TG------ACC--ATG
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6853957 29 +  12164890 CCT--CTTTAA-GG-AA------TC------TGTTTCTCACC--ATG
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     22758 29 -     30946 CCT--CTTTAA-GG-AA------TC------TGTTTCTCACC--ATG
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         9059 29 +     11805 CCT--CTTTAA-GG-AA------TC------TGTTTCTCACC--ATG
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           48393 29 +     52369 CCT--CTTTAA-GG-AA------TC------TGTTTCTCACC--ATG
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         40780 29 -     44753 CCT--CTTTAA-GG-AA------TC------TGTTTCTCACC--ATG
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            22703 29 +     27322 CCT--CTTTAA-GG-AA------TC------TGTTTCTTACC--ATG
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       22348 29 -     53241 CCT--CTTTAA-GG-AA------TC------TGTTTCTCACC--ATG
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         44611 29 -     48185 CCT--CTTTAA-GG-AA------TC------TGTTTCTCACC--ATG
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           40338 28 +     77221 TAT--CATTGG-GG-TA-----C--------ACTTTCTCTAT--GTG
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            8013 23 -     27784 TCT--CCTTAA-AG-AA-----CT-------TG------GCT--GTG
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        252302 23 -    344369 TCT--CCTTAA-AG-AA-----CT-------TG------ACT--GTG
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13248967 23 -  17261082 TCT--CCTTAA-GG-AA-----CT-------TG------Agc--ata
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             606917 23 -   3946241 TCT--CCTTAA-GG-AA-----CT-------TG------AGC--atc
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131542080 23 - 161321710 TCT--CCTTAA-AG-AA-----CT-------TG------ACT--GTG
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             33030 30 +     56732 TTT--CTTTCA-AG-AA-----CTG------GATTTCTCACC--ATG
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6809527 30 +   6970761 TTT--CTTTCA-AG-AA-----CTG------GATTTCTCACC--ATG
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             8916 30 +     18040 TTT--CTTTCA-AG-AA-----CTG------GATTTCTCACC--ATG
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                22880 18 +     68503 CCC--CATTAA-GG-AA-----C------------------C--ATG
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13920729 28 +  90463843 TCT--CCTTGA-GG-TA-----C--------TCTTTTCCTAT--GTG
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1794794 23 +   2252614 TCT--CCTTTA-GG-AA-----CT-------TG------ACt--gtg
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                            3295 30 -     17045 TTT--CTTTCA-AG-AA-----CTG------GATTTCTCACC--ATG
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206380782 30 - 206558726 TTT--CTTTCA-AG-AA-----CTG------GATTTCTCACC--ATG
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44859685 30 -  45163003 TTT--CTTTCA-AG-AA-----CTG------GATTTCTCACC--ATG
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                22312 23 +    109198 TCT--CCTTAA-GG-AA-----CT-------TG------AGC--ATA
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                      3556 18 -      4338 CCC--CCTTAA-GG-AA-----C------------------C--ATG
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15677738 30 -  43202129 TCT--CCTTAT-AG-AA-----CCG------GATTTCTCACC--ATG
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        9652 30 +     34089 TCT--CCTTAT-AG-AA-----CCG------GATTTCTCACC--ATG
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              9591 30 -     60842 TCT--CCTTAT-AG-AA-----CCG------GATTTCTCACC--ATG
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              9685 30 +     67014 TCT--CCTTAT-AG-AA-----CCG------GATTTCTCACC--ATG
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              9662 30 +     60816 TCT--CCTTAT-AG-AA-----CCG------GATTTCTCACC--ATG
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 9599 30 -     76454 TCT--CCTTAT-AG-AA-----CCG------GATTTCTCACC--ATG
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17346369 30 -  30362882 TCT--CTTTAT-GG-AG-----CTG------GATTTCTCACC--ATG
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         25690 30 -     62485 TCT--CTTTAT-GG-AG-----CTG------GATTTCTCACC--ATG
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   41606 16 -    114521 ---------AA-GG-AA-----TT-------TG------ACT--GTG
i Scalopus_aquaticus.ScaAqu_scaffold_9300               I 5 C 0
s Semnopithecus_entellus.k141_1572367                        6531 30 +     15331 TTT--CTTTCA-AG-AA-----CTG------GATTTCTCACC--ATG
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      11906 30 +     20762 TTT--CTTTCA-AG-AA-----CTG------GATTTCTCACC--ATG
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         121910 30 +    130994 TTT--CTTTCA-AG-AA-----CTG------GATTTCTCACC--ATG
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           40690 30 +     46263 TTT--CTTTCA-AG-AA-----CTG------GATTTCTCACC--ATG
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     33835 30 +     42640 TTT--CTTTCA-AG-AA-----CTG------GATTTCTCACC--ATG
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        16857 30 +     30600 TTT--CTTTCA-AG-AA-----CTG------GATTTCTCACC--ATG
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  106890 28 -    120886 TCT--CCTTGA-GG-TA-----C--------AATTTATCTAC--GTG
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            26235 23 +    739146 TCT--CCTTAA-GA-AA-----CT-------TG------ATT--GTG
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17776567 23 -  27805282 TCT--CCTTAG-GA-AC-----AT-------TG------ACT--GTG
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2245248 28 +   2842873 TATT--CTTGA-GG-AA-----T--------tgtttctcatt--gat
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             241079 23 -    276980 TCT--CCTTAT-AG-AA-----CT-------TG------ACT--GTA
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            35279 23 +     62062 TCT--CCTTAA-AG-AA-----CT-------TA------ACA--GTG
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189277274 23 + 218635234 TCC--CCTTAA-GG-AA-----CT-------TG------acc--ata
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        20035 30 -  13920577 TTT--CTTTCA-AG-AA-----CTG------GATTTCTCACC--ATG
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                4278 23 +     20549 TCT--CCTTAA-GG-TA-----CT-------TG------AGT--GTG
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               18527 23 +     45698 TCA--CTTTAA-AG-AA-----CT-------TG------ACC--ATG
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      812866 23 +   1148477 TCT--CCTTAA-AG-AA-----CT-------TG------ACC--ATG
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  63508 23 +     99546 TCT--CCTTAA-AG-AA-----CT-------TG------ACC--ATG
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194013157 30 - 194193292 ttt--ctttaa-ag-AA-----CTG------GATTTCTCACC--ATG
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                  1696 25 -      3104 TCG--CCTTAA-GG-AA-----CT-----TTTG------ACC--ATG
i Tolypeutes_matacus.TolMat_scaffold_475685             C 0 I 6
s Tonatia_saurophila.TonSau_scaffold_3334                  140021 23 -    259118 TCT--CCTTAA-GG-AA-----CT-------TG------GGT--GAG
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        30178 30 +     38948 TTT--CTTTCA-AG-AA-----CTG------GATTTCTCACC--ATG
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   23738 30 -     32910 TTT--CTTTCA-AG-AA-----CTG------GATTTCTCACC--ATG
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      5639 30 -     12939 TTT--CTTTCA-AG-AA-----CTG------GATTTCTCACC--ATG
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       5067 30 -     14244 TTT--CTTTCA-AG-AA-----CTG------GATTTCTCACC--ATG
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           46460 30 -     54611 TTT--CTTTCA-AG-AA-----CTG------GATTTCTCACC--ATG
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        4261 30 -     11566 TTT--CTTTCA-AG-AA-----CTG------GATTTCTCACC--ATA
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     6445 30 -     15592 TTT--CTTTCA-AG-AA-----CTG------GATTTCTCACC--ATG
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          5097 30 +     14371 TTT--CTTTCA-AG-AA-----CTG------GATTTCTCACC--ATG
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   3383 30 +     12481 TTT--CTTTCA-AG-AA-----CTG------GATTTCTCACC--ATG
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        3364 30 -     24393 TTT--CTTTCA-AG-AA-----CTG------GATTTCTCACC--ATG
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       8508 30 -     28054 TTT--CTTTCA-AG-AA-----CTG------GATTTCTCACC--ATG
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44663292 30 -  44834318 TTT--CTTTCA-AG-AA-----CTG------GATTTCTCACC--ATG
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       5604 30 +     13828 TTT--CTTTCA-AG-AA-----CTG------GATTTCTCACC--ATG
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                  11045 18 +     90398 TTC--CCTTAA-GG-AA-----C------------------C--ATG
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16091045 23 +  31416278 TTT--CCTTAA-AG-AA-----CT-------AG------ACC--atg
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                   11130 14 +     13056 -------------------------------TGTTTCTCAAT--ATG
i Tupaia_tana.TupTan_flattened_line_68454               I 10 C 0
s Tupaia_chinensis.KB320831.1                             2802292 13 -   3938065 tctT--CTTAA-TG-AA------------------------------
i Tupaia_chinensis.KB320831.1                           C 0 I 14
s Tursiops_truncatus.MRVK01000923.1                      69319237 19 -  96451834 TCC--CCTTAA-GG-AA-----CG-----------------t--gtg
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                    1973 16 +    136657 ---------AA-GA-AA-----CT-------GG------ACT--GTG
i Uropsilus_gracilis.UroGra_scaffold_4115               I 5 C 0
s Ursus_maritimus.KK498671.1                              6522729 23 +  28682327 TCT--CCTTAA-AG-AA-----CT-------TG------ACT--GTG
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                 10624 29 -     20643 CCT--CTTTAA-GG-AA------TC------TGTTTCTCACC--ATG
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             30159 29 -     33872 CCTT--TTTAA-GG-AA------TC------TGTTTCTCACC--ATG
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1530269 22 -   2331223 TCC--CCTTAA-GG-AA-----CT-------TG------ACT--GT-
i Vicugna_pacos.KN269600.1                              C 0 I 1
s Vulpes_lagopus.VulLag_flattened_line_2045                146398 25 -    281493 TCT--CCTTAA-AG-AA-----CT-------TG------ACTTTGTG
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       132743 28 -    134049 TAT--CCTTGA-GG-AG-----C--------TATTTCTCACT--GAT
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_202118                     2354 21 -      3360 ---------GT-GG-AG-----C--------AGTGTGTCACT--GTG
i Zapus_hudsonius.ZapHud_scaffold_202118                C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            3828 23 -     13665 TCC--CCTTAA-GG-AA-----CC-------TG------ACT--GTG
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 I 3
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Zalophus_californianus.ZalCal_flattened_line_4097        221654  0 -    227762 C
e Odobenus_rosmarus.KB229369.1                             686793  0 -   3126709 C
e Hylobates_pileatus_a.tarseq_592                             37267 2881 -     60944 I
e Tarsius_wallacei.k141_48636                               64696  0 +     65473 C
e Tarsius_lariang.k141_609102                               31387  0 +     42269 C
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Cephalopachus_bancanus.k141_702587                        12545  0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530  0 +    345090 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               18776  9 +    209709 AGT----TA--------------------T---------TT------T
s Acinonyx_jubatus.LLWD01000356.1                         2041618 11 +   3721120 AAA----TA--------------------GG--T-----T-T-----T
i Acinonyx_jubatus.LLWD01000356.1                       C 0 I 1
s Acomys_cahirinus.AcoCah_scaffold_1625                    119264 12 -    189883 AGA----TA--------------------TG------G-TTT-----T
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 I 1
s Ailuropoda_melanoleuca.LNAT01000321.1                  10665485 12 +  23371972 AAA----TA--------------------GG--T-----T-TT----T
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 I 1
s Ailurus_fulgens.LNAC01000003.1                          7102434 11 -  16596857 AAA----TA--------------------GG--T-----T-T-----T
i Ailurus_fulgens.LNAC01000003.1                        C 0 I 1
s Allactaga_bullata.AllBul_scaffold_141108                   2617  6 -      7259 ATG----TA--------------------T------------------
i Allactaga_bullata.AllBul_scaffold_141108              C 0 I 3
s Allenopithecus_nigroviridis.k141_2469532                   6664  9 -     60446 AGT----TA--------------------T---------TT------T
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         7378  9 -     29318 AGT----TA--------------------T---------TT------T
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         6316  9 +     38766 AGT----TA--------------------T---------TT------T
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          7274  9 -     80423 AGT----TA--------------------T---------TT------T
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              2222  9 +     19852 AGT----TA--------------------T---------TC------T
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                4442  9 -     12443 AGT----TA--------------------T---------TC------T
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                             1765  9 +      5070 AGT----TA--------------------T---------TC------T
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                 1512  9 -      1641 AGT----TA--------------------T---------TC------T
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          4251  9 -     24210 AGT----TA--------------------T---------TC------T
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_494922                              755  9 -      8325 AGT----TA--------------------T---------TC------T
i Alouatta_nigerrima.k141_494922                        C 0 C 0
s Alouatta_palliata.k141_405616                              6669  9 +     16794 AGT----TA--------------------T---------TC------T
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_347198                              698  9 +      9111 AGT----TA--------------------T---------TC------T
i Alouatta_puruensis.k141_347198                        C 0 C 0
s Alouatta_seniculus.k141_790278                             5946  9 -      9835 AGT----TA--------------------T---------TC------T
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3528671  4 +   4113121 AAA----A----------------------------------------
i Ammotragus_lervia.NIVO01013474.1                      C 0 I 3
s Anoura_caudifer.AnoCau_scaffold_422                      394626  6 -    631301 AAA----TG--------------------T------------------
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             5899  4 +     55446 AAA----A----------------------------------------
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 I 3
s Aotus_azarae.k141_3170768                                 67556  9 +     78111 AGT----TA--------------------T---------TC------T
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                           10497  9 +     22701 AGT----TA--------------------T---------TC------T
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5754466  9 +   9889416 AGT----TA--------------------T---------TC------T
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                            11044  9 -    104377 AGT----TA--------------------T---------TC------C
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                              11073  9 +     23246 AGT----TA--------------------T---------TC------C
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     3693  6 +     11424 ATA----TT--------------------T------------------
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 I 2
s Arctocebus_calabarensis.k141_587554                        7655 13 +      9265 AGA----TA--------------------TG-CT-T---TT------A
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                12919 10 -     29036 AAATAAATG--------------------T------------------
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9544356  9 +  39197703 AGT----TA--------------------T---------TC------T
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             65630  9 +     85812 AGT----TA--------------------T---------TC------T
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                16640  9 +     89302 AGT----TA--------------------T---------TC------T
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             21144  9 -     58268 AGT----TA--------------------T---------TC------T
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             69138  9 +    119057 AGT----TA--------------------T---------TC------T
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              11107  9 -     25888 AGT----TA--------------------T---------TC------T
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                12180 13 -     16375 AGC----TA--------------------TG--T-TT--TT------T
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               5796 13 +      6337 AGC----TA--------------------TG--T-TT--TT------T
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26386076 11 +  51448160 aaa----ta--------------------t------gt-t------tt
i Balaenoptera_acutorostrata.KI537095.1                 C 0 I 1
s Balaenoptera_bonaerensis.DF502048.1                       11249 11 -     13118 aaa----ta--------------------t------gt-t------tt
i Balaenoptera_bonaerensis.DF502048.1                   C 0 I 1
s Beatragus_hunteri.BeaHun_scaffold_21644                   50663  4 -     72089 AAA----A----------------------------------------
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 I 3
s Bison_bison.KN264915.1                                   305595  4 -   6870073 AAA----A----------------------------------------
i Bison_bison.KN264915.1                                C 0 I 3
s Bos_indicus.CM003021.1                                 22959701  4 + 161108492 AAA----A----------------------------------------
i Bos_indicus.CM003021.1                                C 0 I 3
s Bos_mutus.JH883513.1                                     421880  4 +    998990 AAA----A----------------------------------------
i Bos_mutus.JH883513.1                                  C 0 I 3
s Bos_taurus.CM000177.6                                  22668353  4 + 158972876 AAA----A----------------------------------------
i Bos_taurus.CM000177.6                                 C 0 I 3
s Bubalus_bubalis.KI419065.1                               677217  4 +   1914593 AAA----A----------------------------------------
i Bubalus_bubalis.KI419065.1                            C 0 I 3
s Cacajao_ayresi.k141_724503                               118976  9 -    171031 AGT----TA--------------------T---------TC------T
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 17996  9 +    125063 AGT----TA--------------------T---------TC------T
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                20043  9 -    216513 AGT----TA--------------------T---------TC------T
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       12586  9 -    134917 AGT----TA--------------------T---------TC------T
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3225184  2 -   8989139 ---------------------------------------T-------C
i Camelus_bactrianus.KN276303.1                         I 1 I 1
s Camelus_dromedarius.KN271192.1                           402884  2 -  15254737 ---------------------------------------T-------C
i Camelus_dromedarius.KN271192.1                        I 1 I 1
s Camelus_ferus.KB016973.1                                2978622  2 +   6889770 ---------------------------------------T-------C
i Camelus_ferus.KB016973.1                              I 1 I 1
s CanFam4.chr31                                          11528339 11 +  39901454 AAA----TA--------------------GG--T-----T-T-----T
i CanFam4.chr31                                         C 0 I 1
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   23313 11 +     87036 AAA----TA--------------------GG--T-----T-T-----T
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 I 1
s Canis_lupus_dingo.QKWQ01001993.1                       11275236 11 -  35597290 AAA----Ta--------------------g------gt-t------tt
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 I 1
s Canis_lupus_familiaris.chr31                           11097733 11 +  39895921 AAA----Ta--------------------g------gt-t------tt
i Canis_lupus_familiaris.chr31                          C 0 I 1
s Canis_lupus_orion.HG994411.1                           16464518 11 -  44759192 AAA----TA--------------------g------gt-t------tt
i Canis_lupus_orion.HG994411.1                          C 0 I 1
s Capra_aegagrus.CM003214.1                              21336104  4 + 157394656 AAA----a----------------------------------------
i Capra_aegagrus.CM003214.1                             C 0 I 3
s Capra_hircus.CM004562.1                               135714457  4 - 157403528 AAA----A----------------------------------------
i Capra_hircus.CM004562.1                               C 0 I 3
s Capromys_pilorides.CapPil_scaffold_1011243                  400 13 +      1208 ATA----TA--------------------T-AA---GG-TG------T
i Capromys_pilorides.CapPil_scaffold_1011243            C 0 I 653
s Castor_canadensis.CasCan_scaffold_1326                     1194  3 -    202837 ---------------------------------------GT------T
i Castor_canadensis.CasCan_scaffold_1326                I 6 I 1
s Carollia_perspicillata.CarPer_scaffold_4436               63915  6 +     67245 AAA----TA--------------------T------------------
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   164924  6 -    276539 -----------------------------TG--T-----C-T-----T
i Catagonus_wagneri.CatWag_scaffold_1305                I 3 I 1
s Cavia_aperea.AVPZ01000278.1                            15790925 13 -  24422027 NNN----ta--------------------t----gagg-tg------t
i Cavia_aperea.AVPZ01000278.1                           C 0 I 514
s Cavia_porcellus.DS562889.1                             15802870 13 -  24440124 ATA----Ta--------------------t----gagg-tg------t
i Cavia_porcellus.DS562889.1                            C 0 I 514
s Cavia_tschudii.CavTsc_scaffold_488                       181042 13 +    436027 ATa----ta--------------------t----gagg-tg------t
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 I 514
s Cebus_albifrons.Contig22                               18896711  9 -  29618158 AGT----TA--------------------T---------TC------T
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                13361  9 -     26817 AGT----TA--------------------T---------TC------T
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                17605  9 +     25043 AGT----TA--------------------T---------TC------T
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4370156 12 +   7569818 aaa----ta--------------------t------gt-t-----ttt
i Ceratotherium_simum.JH767818.1                        C 0 I 1
s Ceratotherium_simum_cottoni.CerCot_scaffold_171732          313 12 +      8380 AAA----TA--------------------TG--T-----T-TT----T
i Ceratotherium_simum_cottoni.CerCot_scaffold_171732    C 0 I 1
s Cercocebus_atys.KQ010443.1                              6560604  9 +   6739814 AGT----TA--------------------T---------TT------T
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      32081  9 +     60454 AGT----TA--------------------T---------TT------T
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          7285  9 -     21101 AGT----TA--------------------T---------TT------T
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         64595  9 -    107033 AGT----TA--------------------T---------TT------T
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        7455  9 -     17608 AGT----TA--------------------T---------TT------T
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          4623  9 +     45019 AGT----TA--------------------T---------TT------T
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           4899  9 +     15177 AGT----TA--------------------T---------TT------T
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          7505  9 +     16677 AGT----TA--------------------T---------TT------T
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           29701  9 +     35983 AGT----TA--------------------T---------TT------T
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11996226  9 +  12117833 AGT----TA--------------------T---------TT------T
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46483208  9 +  46592721 AGT----TA--------------------T---------TT------T
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                       1319  9 -     27215 AGT----TA--------------------T---------TT------T
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       7519  9 +     35577 AGT----TA--------------------T---------TT------T
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        7313  9 -     25661 AGT----TA--------------------T---------TT------T
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        7485  9 -     17744 AGT----TA--------------------T---------TT------T
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        26854  9 +     37128 AGT----TA--------------------T---------TT------T
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           5877  3 -      6963 ---------------------------------------TT------T
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      I 6 I 1
s Cheirogaleus_major.k141_1157592                           64396 13 -     68416 AGC----TA--------------------TG--T-TT--TT------T
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_854352                             698 13 +     27737 ATC----TA--------------------TG--T-TT--TT------T
i Cheirogaleus_medius.k141_854352                       C 0 C 0
s Cheracebus_lucifer.k141_619653                            10667  9 -     18223 AGT----TA--------------------T---------TC------T
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              2408  9 +    188999 AGT----TA--------------------T---------TC------T
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           46707  9 +     57117 AGT----TA--------------------T---------TC------T
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          51387  9 +     54541 AGT----TA--------------------T---------TC------T
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15965552 13 +  43084221 ACA----TA--------------------T-AA---GG-CA------G
i Chinchilla_lanigera.JH721867.1                        C 0 I 561
s Chiropotes_israelita.k141_1189915                         76188  9 +    196370 AGT----TA--------------------T---------TC------T
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          20369  9 +     40510 AGT----TA--------------------T---------TC------T
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15145039  9 -  15256731 AGT----TA--------------------T---------TT------T
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      39503  9 -     53260 AGT----TA--------------------T---------TT------T
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101150062  9 + 101219884 AGT----TA--------------------T---------TT------T
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                19897 11 -     21363 AAC----TA--------------------T-A-T-----TT------T
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 I 1
s Choloepus_hoffmanni.KN194586.1                           765201 11 +    964067 aac----ta--------------------t------at-tt------a
i Choloepus_hoffmanni.KN194586.1                        C 0 I 1
s Chrysochloris_asiatica.ChrAsi_scaffold_304221              2825  9 -      7053 AA------A--------------------TG--T-----TA------T
i Chrysochloris_asiatica.ChrAsi_scaffold_304221         C 0 I 1
s Colobus_angolensis.KN985967.1                          10889833  9 +  10971483 AGT----TA--------------------T---------TT------T
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147667761  9 + 156195979 AGT----TA--------------------T---------TT------T
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            19744  9 +     23629 AGT----TA--------------------T---------TT------T
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60624168  5 +  78930452 aaa----tg---------------------------------------
i Condylura_cristata.JH655880.1                         C 0 I 5
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         4569 13 -      5782 AAA----TA--------------------TG--T-----T-TTT---T
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 I 1
s Cricetomys_gambianus.CriGam_scaffold_949                 284169 11 -    399297 TGA----CA--------------------TG------G-TT------T
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 I 1
s Cricetulus_griseus.LT883672.1                          53036455 11 +  72327488 AGA----CA--------------------TG------G-TT------T
i Cricetulus_griseus.LT883672.1                         C 0 I 1
s Crocidura_indochinensis.CroInd_scaffold_27484              4054 10 -     22648 ATA----TG--------------------TG--T-----T-------T
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 I 1
s Cryptoprocta_ferox.CryFer_flattened_line_19014            59554 11 -     70449 AAA----TA--------------------GG--T-----T-T-----T
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 I 1
s Ctenodactylus_gundi.CteGun_scaffold_447                  216302 17 -    956709 ATA----CA--------------------TGAATATTG-TG------T
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 I 1
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 37279 13 -     67205 ATA----TA--------------------T---TA--GATG------T
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 I 553
s Cuniculus_paca.CunPac_flattened_line_16637                22121 13 +     26546 Ata----ta--------------------t----gtgg-tg------t
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 I 540
s Dasyprocta_punctata.DasPun_flattened_line_634             63265 13 -    236241 ata----ta--------------------t----gtgg-tg------t
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 I 536
s Dasypus_novemcinctus.JH568778.1                          186926  3 -   6883506 ---------------------------------------TT------T
i Dasypus_novemcinctus.JH568778.1                       I 6 I 1
s Daubentonia_madagascariensis.ctg11                     16850343 13 +  31942871 AGA----AA--------------------T-A-TAT---TT------T
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80042668 11 -  96802777 aaa----ta--------------------t------gt-t------tt
i Delphinapterus_leucas.KZ290064.1                      C 0 I 1
s Desmodus_rotundus.KZ672188.1                           18703133  6 -  18957592 AAA----TG--------------------T------------------
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 328555 12 +    993696 aaa----ta--------------------t------gt-t-----ttt
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 I 1
s Diceros_bicornis.DicBicMic_scaffold_9545                   9189 12 +    151128 AAA----TA--------------------TG--T-----T-TT----T
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 I 1
s Dinomys_branickii.DinBra_scaffold_1996                   161026 13 +    228994 Ata----ta--------------------t----aagg-tg------g
i Dinomys_branickii.DinBra_scaffold_1996                C 0 I 566
s Dipodomys_ordii.KN672545.1                              3661459  5 +   4240102 GTA----TA---------------------------------------
i Dipodomys_ordii.KN672545.1                            C 0 I 5
s Dipodomys_stephensi.DipSte_scaffold_84338                  3833  5 -     11986 GTA----TA---------------------------------------
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 I 5
s Dolichotis_patagonum.DolPat_scaffold_14102                41828 13 -     73477 ATa----ta--------------------t----gtgg-tg------t
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 I 545
s Echinops_telfairi.JH980316.1                           23005095 11 -  44670279 AAA----TA--------------------TG--T-----TT------C
i Echinops_telfairi.JH980316.1                          C 0 I 1
s Eidolon_helvum.KE772537.1                                 15279 11 +     24177 aaa----tg--------------------t------tt-t------tt
i Eidolon_helvum.KE772537.1                             C 0 I 1
s Elaphurus_davidianus.JRFZ01086400.1                     1498619  4 +   1727528 AAA----a----------------------------------------
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 I 3
s Elephantulus_edwardii.JH947210.1                        7836609 11 +  15467074 AAA----TA--------------------TG--T-----TT------T
i Elephantulus_edwardii.JH947210.1                      C 0 I 1
s Ellobius_lutescens.LOEQ01003611.1                        245165 11 -    369425 AGA----GA--------------------TG------G-TT------T
i Ellobius_lutescens.LOEQ01003611.1                     C 0 I 1
s Ellobius_talpinus.LOJH01076532.1                           1517 11 +      9159 aga----ca--------------------t------gg-tt------t
i Ellobius_talpinus.LOJH01076532.1                      C 0 I 1
s Enhydra_lutris.KZ291749.1                              85879481 11 +  99434291 AAA----TA--------------------GG--T-----T-T-----T
i Enhydra_lutris.KZ291749.1                             C 0 I 1
s Eptesicus_fuscus.JH977687.1                             4710893  6 +   6522550 AAA----TG--------------------T------------------
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5858418 10 -   7175178 aaa----ta--------------------t------gt-t-------t
i Equus_asinus.JREZ01000062.1                           C 0 I 1
s Equus_caballus.CM000402.2                              13356904 10 +  41866177 aaa----ta--------------------t------gt-t-------t
i Equus_caballus.CM000402.2                             C 0 I 1
s Equus_przewalskii.ATBW01073585.1                          18394 10 +     92910 aaa----ta--------------------t------gt-t-------t
i Equus_przewalskii.ATBW01073585.1                      C 0 I 1
s Erinaceus_europaeus.JH835290.1                         11543898 11 +  16010500 aaa----ta--------------------t--aT---C-T-------C
i Erinaceus_europaeus.JH835290.1                        I 335 I 1
s Erythrocebus_patas.Contig8                             48782072  9 -  48907691 AGT----TA--------------------T---------TT------T
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          320919 11 +    330699 AAA----TA--------------------TG--T-----T-T-----T
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 I 1
s Eubalaena_japonica.EubJap_flattened_line_7756             67371 11 +     89355 AAA----TA--------------------TG--T-----T-T-----T
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 I 1
s Eulemur_albifrons.k141_715837                             10460 13 +     13586 AGC----TA--------------------TG--TCT---TT------T
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_1015201                              3719 13 -      4292 AGC----TA--------------------TG--TCT---TT------T
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            16856 13 +     36558 AGC----TA--------------------TG--TCT---TC------T
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            13178 13 +     60246 AGC----TA--------------------TG--TCT---TT------T
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                16663 13 +    109717 AGC----TA--------------------TG--TCT---TC------T
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 4646 13 -     19505 AGC----TA--------------------TG--TCT---TT------T
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                21321 13 +     27497 AGC----TA--------------------TG--TCT---TT------T
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           23777 13 +     26808 AAC----TA--------------------TG--TCT---TT------T
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                38509 13 +     46535 AGC----TA--------------------TG--TCT---TT------T
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              21250 13 -     29447 AGC----TA--------------------TG--TCT---TT------T
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129901191 11 - 159252932 AAA----TA--------------------GG--T-----T-T-----T
i Felis_catus.CM001386.2                                C 0 I 1
s Felis_catus_fca126.CM031420.1                         129288168 11 - 158578461 AAA----TA--------------------GG--T-----T-T-----T
i Felis_catus_fca126.CM031420.1                         C 0 I 1
s Felis_nigripes.FelNig_flattened_line_8080                 29358 11 +     52776 AAA----TA--------------------GG--T-----T-T-----T
i Felis_nigripes.FelNig_flattened_line_8080             C 0 I 1
s Fukomys_damarensis.KN123630.1                          13897492 15 -  19261668 ATATA--TA--------------------T-AA---GG-TG------t
i Fukomys_damarensis.KN123630.1                         C 0 I 594
s Galago_moholi.ctg555                                     216511 13 -    847004 AGA----TA--------------------TG-CT-T---TT------A
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           18873 13 -     43889 AGA----TA--------------------TG-CT-T---TT------A
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          16014 13 +     27357 AGA----TA--------------------TG-CT-T---TT------A
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               160784 11 +    324696 AGA----TA--------------------TG--T-----TT------T
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 I 1
s Giraffa_tippelskirchi.LVKQ01S012154.1                    188393  4 -    189561 AAA----a----------------------------------------
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 I 3
s Glis_glis.GliGli_scaffold_79770                           17689 26 -     18683 ATA----TATATATATATATATATATATAT------------------
i Glis_glis.GliGli_scaffold_79770                       C 0 I 2
s Gorilla_beringei.k141_111300                              10475  9 -     14630 AGT----TA--------------------T---------TT------T
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119657575  9 - 195582420 AGT----TA--------------------T---------TT------T
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   81011  6 +    118900 ATA----TA--------------------T------------------
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 I 2
s Hapalemur_alaotrensis.k141_1280836                         7252 13 +     10286 AGC----TA--------------------TG--T-TT--TT------T
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             5733 13 -     11661 AGC----TA--------------------TG--T-TT--TT------T
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                            11057 13 +     56096 AAC----TA--------------------TG--T-TT--TT------T
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        34306 13 -     42470 AGC----TA--------------------TG--T-TT--TT------T
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        50932 13 -     54384 AGC----TA--------------------TG--T-TT--TT------T
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              24672 11 +     53719 AAA----TA--------------------GG------C-T-T-----T
i Helogale_parvula.HelPar_flattened_line_22962          C 0 I 1
s Hemitragus_hylocrius.HemHyl_scaffold_16669                35490  4 -     91191 AAA----A----------------------------------------
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 I 3
s Heterocephalus_glaber.JH602058.1                        2561822 13 +  31725842 ata----ta--------------------t----aagg-tg------t
i Heterocephalus_glaber.JH602058.1                      C 0 I 551
s Heterohyrax_brucei.HetBruBak_scaffold_25354               64254 11 +     73687 AAA----TA--------------------TCA-------TC------T
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 I 1
s Hippopotamus_amphibius.HipAmp_scaffold_1308              152742 11 +    277961 AAA----TA--------------------TG--T-----T-T-----T
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 I 1
s Hipposideros_armiger.JXIK01001085.1                      286211 11 -    477199 aaa----tg--------------------t------gt-t------tt
i Hipposideros_armiger.JXIK01001085.1                   C 0 I 1
s Hipposideros_galeritus.HipGal_scaffold_52959               3484 11 +     26078 AAA----TG--------------------CG--T-----T-T-----T
i Hipposideros_galeritus.HipGal_scaffold_52959          C 0 I 1
s Hoolock_leuconedys.ctg79                                     10400  9 -   7690867 AGT----TA--------------------T---------TT------T
i Hoolock_leuconedys.ctg79                                 C 0 I 23
s Hyaena_hyaena.HyaHya_flattened_line_20729                 25108 10 -     67322 AAA----TA--------------------GG--T-----T-------T
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 I 1
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           22470 13 -    119109 ATa----ta--------------------t----gtgg-tg------t
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 I 546
s Hylobates_abbotti.k141_1816750                             2971  9 +      3202 AGT----TA--------------------T---------TT------T
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1136966                               980  9 +      9785 AGT----TA--------------------T---------TT------T
i Hylobates_agilis.k141_1136966                         C 0 C 0
s Hylobates_klossii.k141_468230                              4460  9 +      5464 AGT----TA--------------------T---------TT------T
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14629806  9 -  25970782 AGT----TA--------------------T---------TT------T
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            2358  9 +      4161 AGT----TA--------------------T---------TT------T
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                    10737 13 +     22540 AGA----TG--------------------T-AA---GG-AA------T
i Hystrix_cristata.HysCri_scaffold_50788                C 0 I 560
s Ictidomys_tridecemlineatus.JH393315.1                   7131575  5 +  13083262 tt-----tt--------------------t------------------
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 I 2
s Indri_indri.k141_2197838                                   2791 13 +      3484 AGC----TA--------------------TG--T-TT--AT------T
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              14898  6 +     17520 AAA----TA--------------------T------------------
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 I 3
s Jaculus_jaculus.JH725517.1                              8580365  6 +  11848649 ATG----TA--------------------T------------------
i Jaculus_jaculus.JH725517.1                            C 0 I 3
s Kogia_breviceps.KogBre_flattened_line_35920               29515 11 +     37189 AAA----TA--------------------TG--T-----T-T-----T
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 I 1
s Lagothrix_lagothricha.k141_12968                          55228  9 -    147782 AGT----TA--------------------T---------TC------T
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    7444  6 +     26176 AAA----TG--------------------T------------------
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258412610 13 - 285822530 AGC----TA--------------------TG--T-TT--TT------T
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        29944  3 +     39228 ---------------------------------------TT------T
i Lepilemur_ankaranensis.k141_884009                    I 8 C 0
s Lepilemur_dorsalis.k141_134267                            59308  3 +     63517 ---------------------------------------TT------T
i Lepilemur_dorsalis.k141_134267                        I 8 C 0
s Lepilemur_ruficaudatus.k141_574529                        37682 13 -     38897 AGC----TA--------------------TG--T-TT--TT------T
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      3734  3 -     13103 ---------------------------------------TT------T
i Lepilemur_septentrionalis.k141_710646                 I 8 C 0
s Leptonychotes_weddellii.KB714749.1                      3093738 11 -   3498232 CAA----TA--------------------GG--T-----T-T-----T
i Leptonychotes_weddellii.KB714749.1                    C 0 I 1
s Lepus_americanus.LepAme_scaffold_62849                    22213  9 +     22452 A------TA--------------------TG--T-----TT------T
i Lepus_americanus.LepAme_scaffold_62849                C 0 I 1
s Lipotes_vexillifer.KE558548.1                            141823 11 +   3060487 aaa----ta--------------------t------gt-t------tt
i Lipotes_vexillifer.KE558548.1                         C 0 I 1
s Lophocebus_aterrimus.ctg55                             19253693  9 +  19376315 AGT----TA--------------------T---------TT------T
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           16476 13 +     84689 AGA----TA--------------------TG-CT-T---TT------A
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3784209 13 +   6799190 AGA----TA--------------------TG-CT-T---TT------A
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20599994 11 -  62548349 aaa----ta--------------------t------gt-tt------t
i Loxodonta_africana.GL010040.1                         C 0 I 1
s Lycaon_pictus.CM007556.1                               11097189 11 +  39895028 AAA----Ta--------------------g------gt-t------tt
i Lycaon_pictus.CM007556.1                              C 0 I 1
s Macaca_arctoides.k141_2201161                             25442  9 +     74745 AGT----TA--------------------T---------TT------T
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12711905  9 +  12821369 AGT----TA--------------------T---------TT------T
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                4478  9 -     26467 AGT----TA--------------------T---------TT------T
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           52349  9 +     63263 AGT----TA--------------------T---------TT------T
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 4459  9 -     26361 AGT----TA--------------------T---------TT------T
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_2667654                                 762  9 -      5626 AGT----TA--------------------T---------TT------T
i Macaca_leonina.k141_2667654                           C 0 C 0
s Macaca_maura.k141_251854                                  50878  9 -     79256 AGT----TA--------------------T---------TT------T
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196040976  9 + 196197964 AGT----TA--------------------T---------TT------T
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11451146  9 +  11645122 AGT----TA--------------------T---------TT------T
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   9832  9 -     46448 AGT----TA--------------------T---------TT------T
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                7493  9 -     13212 AGT----TA--------------------T---------TT------T
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 21175  9 -     55006 AGT----TA--------------------T---------TT------T
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43846597  9 +  43892939 AGT----TA--------------------T---------TT------T
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               22459  9 -     24607 AGT----TA--------------------T---------TT------T
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               9829  9 -     27140 AGT----TA--------------------T---------TT------G
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                703890 16 +    802869 AAA----TG--------------------TG--T-----T-TTTTTTT
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 I 1
s Mandrillus_leucophaeus.scaffold125                     43442862  9 -  43563597 AGT----TA--------------------T---------TT------T
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4455661  9 -   4543643 AGT----TA--------------------T---------TT------T
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            154173 11 +    252755 aaa----ta--------------------c------at-t------tt
i Manis_javanica.JSZB01003966.1                         C 0 I 1
s Manis_pentadactyla.KN017078.1                             41771 11 +     58827 aaa----ta--------------------c------at-t------tt
i Manis_pentadactyla.KN017078.1                         C 0 I 1
s Marmota_marmota.CZRN01000005.1                         36879441  5 +  64221397 tt-----tt--------------------t------------------
i Marmota_marmota.CZRN01000005.1                        C 0 I 2
s Megaderma_lyra.MegLyr_scaffold_3562                       67692  6 -    234502 AGA----TG--------------------C------------------
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 I 6
s Mellivora_capensis.MelCap_flattened_line_15433             8576 11 -     87323 AAA----TA--------------------GG--T-----T-T-----T
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 I 1
s Meriones_unguiculatus.MerUng_scaffold_9483                 3390 11 +    115071 AGA----TA--------------------TG------G-TT------T
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 I 1
s Mesocricetus_auratus.KB708139.1                         1053029 11 -  26018355 AGG----CA--------------------T-A-----G-TT------T
i Mesocricetus_auratus.KB708139.1                       C 0 I 1
s Mesoplodon_bidens.MesBid_scaffold_96348                    4486 11 -     12939 AAA----TA--------------------TG--T-----A-T-----T
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 I 1
s Microcebus_murinus.CM007691.1                          16515651 13 +  47401472 agc----ta--------------------t----gttt-tt------t
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  46709 11 -     48017 ATG----TG--------------------TG--T-----TT------A
i Microgale_talazaci.MicTal_scaffold_34660              C 0 I 1
s Micronycteris_hirsuta.MicHir_scaffold_37978               26870  6 -     32043 AAA----TG--------------------T------------------
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22826001 11 -  98408828 AGA----CA--------------------TG------G-TT------T
i Microtus_ochrogaster.CM001673.1                       C 0 I 1
s Miniopterus_natalensis.LDJU01000022.1                   8215223  5 +  10048721 AAA----TG---------------------------------------
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            39682  5 +     45743 AAA----TG---------------------------------------
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         7411  9 +     29742 AGT----TA--------------------T---------TT------T
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        19137 11 -    104932 CAA----TA--------------------GG--T-----T-T-----T
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 I 1
s Mirza_zaza.k141_593947                                     6346 13 -     12809 AGG----TA--------------------TG--T-TT--TT------T
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 152261 11 +    154973 AAA----TA--------------------TG--T-----T-T-----T
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 I 1
s Mormoops_blainvillei.MorMeg_scaffold_2952                165380  6 +    265003 AAC----TG--------------------T------------------
i Mormoops_blainvillei.MorMeg_scaffold_2952             I 10 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  9066  4 -     19904 AAA----A----------------------------------------
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 I 3
s Mungos_mungo.MunMun_flattened_line_8729                  152401 11 -    168139 AAA----TA--------------------GG--T-----T-T-----T
i Mungos_mungo.MunMun_flattened_line_8729               C 0 I 1
s Murina_feae.MurFea_scaffold_2254                          26212  6 -    100666 AAA----TG--------------------T------------------
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70773271 11 +  92629107 AGA----CA--------------------CG------G-TT------T
i Mus_caroli.LT608236.1                                 C 0 I 1
s Mus_musculus.chr16                                     75495335 11 +  98207768 AGA----CA--------------------TG------G-TT------T
i Mus_musculus.chr16                                    C 0 I 1
s Mus_pahari.LT608305.1                                  67562062 11 +  89017189 AGA----CA--------------------TG------G-Ct------t
i Mus_pahari.LT608305.1                                 C 0 I 1
s Mus_spretus.CM004110.1                                 74338043 11 +  97876770 AGA----CA--------------------TG------G-TT------T
i Mus_spretus.CM004110.1                                C 0 I 1
s Muscardinus_avellanarius.MusAve_scaffold_9643             16075  6 +     98495 ATA----TA--------------------T------------------
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 I 2
s Mustela_putorius.JH417978.1                             4430679 11 -  28371801 AAA----TA--------------------GG--T-----T-T-----T
i Mustela_putorius.JH417978.1                           C 0 I 1
s Myocastor_coypus.MyoCoy_scaffold_3653                     97033 13 -    117718 ATA----TA--------------------T-AA---GG-TA------T
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 I 724
s Myotis_brandtii.KE161952.1                               973226  6 +   8389877 AAA----TG--------------------T------------------
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5024302  6 +   6462685 AAA----TG--------------------T------------------
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        15960  6 +     66751 AAA----TG--------------------T------------------
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_12795               317 11 -     87886 AAC----TA--------------------C-A-T-----TT------T
i Myrmecophaga_tridactyla.MyrTri_scaffold_12795         C 0 I 1
s Nannospalax_galili.KL201303.1                            125746 11 +    362372 atg----ta--------------------t------aa-tt------t
i Nannospalax_galili.KL201303.1                         C 0 I 1
s Nasalis_larvatus.k141_153429                              11672  9 +     48152 AGT----TA--------------------C---------TT------T
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4492532 11 -  14209539 CAA----TA--------------------GG--T-----T-T-----T
i Neomonachus_schauinslandi.NINY01007774.1              C 0 I 1
s Neophocaena_asiaeorientalis.KZ688543.1                  3956852 11 -   4490290 aaa----ta--------------------t------gt-t------tt
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 I 1
s Noctilio_leporinus.NocLep_scaffold_12062                  52699  5 +     94413 ACA----TG---------------------------------------
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_762468                            1477  9 -      2755 AGT----TA--------------------T---------TT------T
i Nomascus_annamensis.k141_762468                       C 0 C 0
s Nomascus_concolor.k141_256540                              8087  9 -      8966 AGT----TA--------------------T---------TT------T
i Nomascus_concolor.k141_256540                         C 0 C 0
s Nomascus_gabriellae.k141_1400361                           2028  9 -      2203 AGT----TA--------------------T---------TT------T
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_453                             7340  9 +     12787 AGT----TA--------------------T---------TT------T
i Nomascus_siki_b.tarseq_453                        C 0 I 29
s Nomascus_siki_a.k141_421408                                  1942  9 +     16235 AGT----TA--------------------T---------TT------T
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                40059 11 +   3668941 AAA----Ta--------------------g------gt-t------tt
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 I 1
s Nycticebus_bengalensis.LG16                            65573251 13 -  95554990 AGA----TA--------------------TG-CT-T---TT------A
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_6040852                             887 13 +      1868 AGA----TA--------------------TG-CT-T---TT------A
i Nycticebus_coucang.k141_6040852                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65681430 13 +  89412551 AGA----TA--------------------TG-CT-T---TT------A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            5001271  9 -  23139505 a------tt--------------------c------ct-tt------t
i Ochotona_princeps.JH802095.1                          C 0 I 1
s Octodon_degus.JH651621.1                                3692348 13 +  10294119 Ata----ta--------------------t----aagg-tg------t
i Octodon_degus.JH651621.1                              C 0 I 553
s Odocoileus_virginianus.KZ101650.1                       1086050  4 +   1425656 AAA----A----------------------------------------
i Odocoileus_virginianus.KZ101650.1                     C 0 I 3
s Okapia_johnstoni.LVCL01S0017931.1                         44123  4 +     78940 AAA----a----------------------------------------
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 I 3
s Ondatra_zibethicus.OndZib_scaffold_6821                  131807 11 +    145789 AGA----CA--------------------TG------G-TT------T
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 I 1
s Onychomys_torridus.OnyTor_scaffold_12578                  44741 11 +     62360 AGA----CA--------------------TGA-------TT------T
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 I 1
s Orcinus_orca.KB316965.1                                 7230526 11 -   7562323 aaa----ta--------------------t------gt-t------tt
i Orcinus_orca.KB316965.1                               C 0 I 1
s Orycteropus_afer.OryAfe_flattened_line_371885              1731 11 +      3658 AAG----TA--------------------TG--T-----TT------T
i Orycteropus_afer.OryAfe_flattened_line_371885         C 0 I 1
s Oryctolagus_cuniculus.CM000803.1                      141885229  9 + 163896628 a------ta--------------------t------gt-tt------t
i Oryctolagus_cuniculus.CM000803.1                      C 0 I 1
s Otocyon_megalotis.JAEUCK010005121.1                      317196 11 -    505867 AAA----Ta--------------------g------gt-t------tt
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 I 1
s Otolemur_crassicaudatus.k141_505435                        6372 13 -     53940 AGA----TA--------------------TG-CT-T---TT------A
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18014338 13 -  38779656 AGA----TA--------------------t----gctt-tt------a
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134085272  4 - 275406953 AAA----A----------------------------------------
i Ovis_aries.CM001582.2                                 C 0 I 3
s Ovis_canadensis.OviCan_scaffold_6251                      86518  4 +    140051 AAA----A----------------------------------------
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 I 3
s Pan_paniscus.CM003386.1                               127579754  9 - 205426864 AGT----TA--------------------T---------TT------T
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120156914  9 - 196562556 AGT----TA--------------------T---------TT------T
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  41958 11 +    295523 AAA----TA--------------------GG--T-----T-T-----T
i Panthera_onca.PanOnc_flattened_line_1615              C 0 I 1
s Panthera_pardus.KV860323.1                              3645772 11 +  18214204 AAA----TA--------------------GG--T-----T-T-----T
i Panthera_pardus.KV860323.1                            C 0 I 1
s Panthera_tigris.KE721879.1                              5035409 11 -   6340057 AAA----TA--------------------GG--T-----T-T-----T
i Panthera_tigris.KE721879.1                            C 0 I 1
s Pantholops_hodgsonii.KE114631.1                         1074157  4 -   1292953 AAA----a----------------------------------------
i Pantholops_hodgsonii.KE114631.1                       C 0 I 3
s Papio_anubis.CM001492.2                               188161654  9 - 188283584 AGT----TA--------------------T---------TT------T
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              4744  9 +     25005 AGT----TA--------------------T---------TT------T
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47519026  9 +  47705337 AGT----TA--------------------T---------TT------T
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 73017  9 -    104429 AGT----TA--------------------T---------TT------T
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   11549  9 +     14967 AGT----TA--------------------T---------TT------T
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 7414  9 -      7628 AGT----TA--------------------T---------TT------T
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    123429 11 -    135482 AAA----TA--------------------GG--T-----T-T-----T
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 I 1
s Perodicticus_ibeanus.k141_117958                          12036 13 -     23713 AGA----TA--------------------TG-CT-T---TT------A
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           13187 13 +     61070 AGA----TA--------------------TG-CT-T---TT------A
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       3455  5 +     49596 AAA----TG---------------------------------------
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 I 5
s Peromyscus_maniculatus.KI615458.1                       2840554 11 -   3366660 AGA----CA--------------------TGA-------TT------T
i Peromyscus_maniculatus.KI615458.1                     C 0 I 1
s Petromus_typicus.PetTyp_scaffold_33007                    18182 11 -     36578 CTA----TA--------------------TG------G-TG------T
i Petromus_typicus.PetTyp_scaffold_33007                C 0 I 986
s Phocoena_phocoena.PhoPho_flattened_line_53071              4991  5 +      8220 AAA----TA---------------------------------------
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 I 5
s Piliocolobus_badius.k141_1987485                           5212  9 -      5908 AGT----TA--------------------T---------CT------T
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       5831  9 -     17985 AGT----TA--------------------T---------CT------T
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            5198  9 +      7694 AGT----TA--------------------T---------CT------T
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26743681  9 +  26888534 AGT----TA--------------------T---------CT------T
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306           101456  6 +    112873 AAA----TG--------------------T------------------
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990          11485 11 +     21690 AAA----CA--------------------TG--T-----T-T-----T
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 I 1
s Plecturocebus_bernhardi.k141_959214                       27319  9 +     44506 AGT----TA--------------------T---------TC------T
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        27532  9 +     67491 AGT----TA--------------------T---------TC------T
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      17771  9 -     98129 AGT----TA--------------------T---------TC------T
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     27372  9 +    147771 AGT----TA--------------------T---------TC------T
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         4007  9 -     43940 AGT----TA--------------------T---------TC------T
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          8090  9 -     55515 AGT----TA--------------------T---------TC------T
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         27444  9 +    152463 AGT----TA--------------------T---------TC------T
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       5251  9 -    119457 AGT----TA--------------------T---------TC------T
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         17166  9 +    134592 AGT----TA--------------------T---------TC------T
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          27754  9 -     75465 AGT----TA--------------------T---------TC------T
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              192385  9 -    373494 AGT----TA--------------------T---------TT------T
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19813034  9 +  19899266 AGT----TA--------------------T---------TT------T
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               8954  9 -     15069 AGT----TA--------------------C---------TT------T
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              9069  9 +     14865 AGT----TA--------------------C---------TT------T
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                5358 11 -      9567 AAA----TA--------------------TCA-------TT------T
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 I 1
s Prolemur_simus.MPIZ01000048.1                           6853986 13 +  12164890 agc----ta--------------------t----gttt-tt------t
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     22787 13 -     30946 agc----ta--------------------t----gttt-tt------t
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         9088 13 +     11805 AGC----TA--------------------TG--T-TT--TT------T
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           48422 13 +     52369 AGC----TA--------------------TG--T-TT--TT------T
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         40809 13 -     44753 AGC----TA--------------------TG--T-TT--TT------T
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            22732 13 +     27322 AGC----TA--------------------TG--T-TT--TT------T
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       22377 14 -     53241 AGC----TA--------------------TG--T-TTT-TT------T
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         44640 14 -     48185 AGC----TA--------------------TGA-T-TT--TT------T
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           40366 11 +     77221 AGA----TA--------------------TGA-------TT------T
i Psammomys_obesus.NESX01026517.1                       C 0 I 1
s Pteronotus_parnellii.KE867983.1                            8036  6 -     27784 AAA----TA--------------------T------------------
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        252325 11 -    344369 AAA----TA--------------------GG--T-----T-T-----T
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 I 1
s Pteropus_alecto.KB031157.1                             13248990 11 -  17261082 aaa----tg--------------------t------gt-t------tt
i Pteropus_alecto.KB031157.1                            C 0 I 1
s Pteropus_vampyrus.KN525959.1                             606940 11 -   3946241 aaa----tg--------------------t------gt-t------tt
i Pteropus_vampyrus.KN525959.1                          C 0 I 1
s Puma_concolor.QAVW01000427.1                          131542103 11 - 161321710 AAA----TA--------------------GG--T-----T-T-----T
i Puma_concolor.QAVW01000427.1                          C 0 I 1
s Pygathrix_cinerea.k141_374971                             33060  9 +     56732 AGT----TA--------------------C---------TT------T
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6809557  9 +   6970761 AGT----TA--------------------C---------TT------T
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             8946  9 +     18040 AGT----TA--------------------C---------TT------T
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                22898  4 +     68503 AAA----A----------------------------------------
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 I 3
s Rattus_norvegicus.chr11                                13920757 11 +  90463843 CGA----CA--------------------TG------G-TT------T
i Rattus_norvegicus.chr11                               C 0 I 1
s Rhinolophus_sinicus.LVEH01000179.1                      1794817 11 +   2252614 aaa----tg--------------------t------gt-t------tt
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 I 1
s Rhinopithecus_bieti.k119_554384                            3325  9 -     17045 AGT----TA--------------------C---------TT------T
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206380812  9 - 206558726 AGT----TA--------------------C---------TT------T
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44859715  9 -  45163003 AGT----TA--------------------C---------TT------T
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                22335  9 +    109198 AAA----TG--------------------C---------T-T-----T
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 I 1
s Saiga_tatarica.SaiTat_scaffold_371890                      3574  4 -      4338 AAA----A----------------------------------------
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 I 3
s Saimiri_boliviensis.NW_024100938.1                     15677768  9 -  43202129 AGT----TA--------------------T---------TC------T
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        9682  9 +     34089 AGT----TA--------------------T---------TC------T
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              9621  9 -     60842 AGT----TA--------------------T---------TC------T
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              9715  9 +     67014 AGT----TA--------------------T---------TC------T
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              9692  9 +     60816 AGT----TA--------------------T---------TC------T
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 9629  9 -     76454 AGT----TA--------------------T---------TC------T
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17346399  9 -  30362882 AGT----TA--------------------T---------TC------T
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         25720  9 -     62485 AGT----TA--------------------T---------TC------T
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   41622  5 -    114521 AAA----TG---------------------------------------
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 I 5
s Semnopithecus_entellus.k141_1572367                        6561  9 +     15331 AGT----TA--------------------C---------TT------T
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      11936  9 +     20762 AGT----TA--------------------C---------TT------T
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         121940  9 +    130994 AGT----TA--------------------C---------TT------T
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           40720  9 +     46263 AGT----TA--------------------C---------TT------T
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     33865  9 +     42640 AGT----TA--------------------C---------TT------T
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        16887  9 +     30600 AGT----TA--------------------C---------TT------T
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  106918 11 -    120886 AGA----CA--------------------TGA-------TT------T
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 I 1
s Solenodon_paradoxus.SolPar_flattened_line_1012            26258 10 +    739146 AAA----CA--------------------T-A-T-----T-------T
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 I 1
s Sorex_araneus.JH798170.1                               17776590 11 -  27805282 ATA----CA--------------------TG-CT-----T-------T
i Sorex_araneus.JH798170.1                              C 0 I 1
s Spermophilus_dauricus.KZ294190.1                        2245276  5 +   2842873 tt-----tt--------------------t------------------
i Spermophilus_dauricus.KZ294190.1                      C 0 I 2
s Spilogale_gracilis.SpiGra_flattened_line_905             241102 11 -    276980 AAA----TA--------------------AG--T-----T-T-----T
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 I 1
s Suricata_suricatta.SurSur_flattened_line_20339            35302 11 +     62062 AAA----TA--------------------GG--T-----T-T-----T
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 I 1
s Sus_scrofa.CM000824.4                                 189277297 11 + 218635234 aaa----ta--------------------t------gt-t------tt
i Sus_scrofa.CM000824.4                                 C 0 I 1
s Symphalangus_syndactylus.tarseq_24                        20065  9 -  13920577 AGT----TA--------------------T---------TT------T
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                4301  6 +     20549 ACA----TG--------------------T------------------
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               18550 11 +     45698 AAC----TA--------------------C-A-T-----TT------T
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 I 1
s Tapirus_indicus.TapInd_scaffold_176                      812889 11 +   1148477 AAA----TA--------------------TG--T-----T-T-----T
i Tapirus_indicus.TapInd_scaffold_176                   C 0 I 1
s Tapirus_terrestris.TapTer_scaffold_14939                  63531 11 +     99546 AAA----TA--------------------TG--T-----T-T-----T
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 I 1
s Theropithecus_gelada.CM009951.1                       194013187  9 - 194193292 AGT----TA--------------------T---------TT------T
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                  1727  3 -      3104 ---------------------------------------TT------T
i Tolypeutes_matacus.TolMat_scaffold_475685             I 6 I 1
s Tonatia_saurophila.TonSau_scaffold_3334                  140044  6 -    259118 AAA----TG--------------------T------------------
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        30208  9 +     38948 AGT----TA--------------------C---------TT------T
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   23768  9 -     32910 AGT----TA--------------------C---------TT------T
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      5669  9 -     12939 AGT----TA--------------------C---------TT------T
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       5097  9 -     14244 AGT----TA--------------------C---------TT------T
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           46490  9 -     54611 AGT----TA--------------------C---------TT------T
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        4291  9 -     11566 AGT----TA--------------------C---------TT------T
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     6475  9 -     15592 AGT----TA--------------------C---------TT------T
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          5127  9 +     14371 AGT----TA--------------------C---------TT------T
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   3413  9 +     12481 AGT----TA--------------------C---------TT------T
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        3394  9 -     24393 AGT----TA--------------------C---------TT------T
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       8538  9 -     28054 AGT----TA--------------------C---------TT------T
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44663322  9 -  44834318 AGT----TA--------------------C---------TT------T
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       5634  9 +     13828 AGT----TA--------------------C---------TT------T
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                  11063 10 +     90398 AAA----TA--------------------TG--T-----T-------T
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 I 2
s Trichechus_manatus.JH594618.1                          16091068 11 +  31416278 aaa----ta--------------------t------gt-tt------t
i Trichechus_manatus.JH594618.1                         C 0 I 1
s Tupaia_chinensis.KB320831.1                             2802319 11 -   3938065 Agg----ta--------------------t------gt-tt------t
i Tupaia_chinensis.KB320831.1                           I 14 I 1
s Tupaia_tana.TupTan_flattened_line_68454                   11144 11 +     13056 AGA----TA--------------------TG--T-----TT------T
i Tupaia_tana.TupTan_flattened_line_68454               C 0 I 1
s Tursiops_truncatus.MRVK01000923.1                      69319256 11 -  96451834 aaa----ta--------------------t------gt-t------tt
i Tursiops_truncatus.MRVK01000923.1                     C 0 I 1
s Uropsilus_gracilis.UroGra_scaffold_4115                    1989  5 +    136657 AAA----TG---------------------------------------
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 I 5
s Ursus_maritimus.KK498671.1                              6522752 11 +  28682327 AAA----TA--------------------GG--T-----T-T-----T
i Ursus_maritimus.KK498671.1                            C 0 I 1
s Varecia_rubra.k141_432109                                 10653 13 -     20643 AGC----TA--------------------TG--T-TT--TT------T
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             30188 13 -     33872 AGC----TA--------------------TG--T-TT--TT------T
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1530292  2 -   2331223 ---------------------------------------T-------C
i Vicugna_pacos.KN269600.1                              I 1 I 1
s Vulpes_lagopus.VulLag_flattened_line_2045                146423  6 -    281493 AAA----TA--------------------G------------------
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 I 6
s Xerus_inauris.XerIna_scaffold_7898                       132771  6 -    134049 ATA----TT--------------------T------------------
i Xerus_inauris.XerIna_scaffold_7898                    C 0 I 2
s Zapus_hudsonius.ZapHud_scaffold_202118                     2375  6 -      3360 ATG----TA--------------------C------------------
i Zapus_hudsonius.ZapHud_scaffold_202118                C 0 I 1
s Ziphius_cavirostris.ZipCav_flattened_line_60625            3854  6 -     13665 -----------------------------TG--T-----T-T-----T
i Ziphius_cavirostris.ZipCav_flattened_line_60625       I 3 I 1
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Zalophus_californianus.ZalCal_flattened_line_4097        221654  0 -    227762 C
e Odobenus_rosmarus.KB229369.1                             686793  0 -   3126709 C
e Myotis_lucifugus.GL429887.1                             3470729  0 -   3747815 C
e Hylobates_pileatus_a.tarseq_592                             37267 2881 -     60944 I
e Tarsius_wallacei.k141_48636                               64696  0 +     65473 C
e Tarsius_lariang.k141_609102                               31387  0 +     42269 C
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Cephalopachus_bancanus.k141_702587                        12545  0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530  0 +    345090 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               18785 23 +    209709 A----T-C-TC-----CATA--------------CA--A-----ACTGTGGTAGT
s Acinonyx_jubatus.LLWD01000356.1                         2041630 23 +   3721120 A----T-T-TC-----CATA--------------CA--A-----ACTGTAGTACT
i Acinonyx_jubatus.LLWD01000356.1                       I 1 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    119277 23 -    189883 A----T-T-TC-----TATA--------------CA--A-----AATGCAGTAGC
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 1 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10665498 23 +  23371972 A----T-T-TC-----CATA--------------CA--A-----ACTGTAGTACT
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 1 C 0
s Ailurus_fulgens.LNAC01000003.1                          7102446 23 -  16596857 A----T-T-TC-----CATA--------------CA--A-----ACTGTAGTATG
i Ailurus_fulgens.LNAC01000003.1                        I 1 C 0
s Allactaga_bullata.AllBul_scaffold_141108                   2626 20 -      7259 ---------TC-----CACA--------------CA--G-----AATGTGGGAGC
i Allactaga_bullata.AllBul_scaffold_141108              I 3 C 0
s Allenopithecus_nigroviridis.k141_2469532                   6673 23 -     60446 A----T-C-CC-----CATA--------------CA--A-----ACTGTAGTAGT
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         7387 23 -     29318 A----T-C-CC-----CACA--------------CA--A-----ACTGTAGTAGT
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         6325 23 +     38766 A----T-C-CC-----CACA--------------CA--A-----ACTGTAGTAGT
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          7283 23 -     80423 A----T-C-CC-----CACA--------------CA--A-----ACTGTAGTAGT
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              2231 23 +     19852 A----T-C-TC-----CACA--------------CA--A-----ACTGTAGTAGT
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                4451 23 -     12443 A----C-C-TC-----CACA--------------CA--A-----ACTGTAGTAGT
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                             1774 23 +      5070 A----T-C-TC-----CACA--------------CA--A-----ACTGTAGTAGT
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                 1521 23 -      1641 A----T-C-TC-----CACA--------------CA--A-----ACTGTAGTAGT
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          4260 23 -     24210 A----C-C-TC-----CACA--------------CA--A-----ACTGTAGTAGT
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_494922                              764 23 -      8325 A----T-C-TC-----CACA--------------CA--A-----ACTGTAGTAGT
i Alouatta_nigerrima.k141_494922                        C 0 C 0
s Alouatta_palliata.k141_405616                              6678 23 +     16794 A----T-C-TC-----CACA--------------CA--A-----ACTGTAGTAGT
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_347198                              707 23 +      9111 A----T-C-TC-----CACA--------------CA--A-----ACTGTAGTAGT
i Alouatta_puruensis.k141_347198                        C 0 C 0
s Alouatta_seniculus.k141_790278                             5955 23 -      9835 A----T-C-TC-----CACA--------------CA--A-----ACTGTAGTAGT
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3528678 23 +   4113121 g----t-t-tc-----cata--------------ca--a-----actgtagTGAC
i Ammotragus_lervia.NIVO01013474.1                      I 3 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      394632  9 -    631301 ----------------------------------------------TGGGGTAGT
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             5906 23 +     55446 G----T-T-TC-----CAAA--------------CA--A-----ATGGTAGTGAC
i Antilocapra_americana.AntAmePen_scaffold_27338        I 3 C 0
s Aotus_azarae.k141_3170768                                 67565 22 +     78111 A----T-C-TC-----CACA--------------CA--A-----ACTGAAGTAG-
i Aotus_azarae.k141_3170768                             C 0 I 1
s Aotus_griseimembra.k141_3275623                           10506 22 +     22701 A----T-C-TC-----CACA--------------CA--A-----ACTGTAGTAG-
i Aotus_griseimembra.k141_3275623                       C 0 I 1
s Aotus_nancymaae.KZ196176.1                              5754475 22 +   9889416 A----T-C-TC-----CACA--------------CA--A-----ACTGTAGTAG-
i Aotus_nancymaae.KZ196176.1                            C 0 I 1
s Aotus_trivirgatus.k141_1740727                            11053 23 -    104377 A----TCC-TC-----CACA--------------CA--A-----ACTGTAGTAG-
i Aotus_trivirgatus.k141_1740727                        C 0 I 1
s Aotus_vociferans.k141_718647                              11082 23 +     23246 A----TCC-TC-----CACA--------------CA--A-----ACTGTAGTAG-
i Aotus_vociferans.k141_718647                          C 0 I 1
s Aplodontia_rufa.AprRuf_scaffold_101456                     3701 23 +     11424 A----T-T-TC-----CACA--------------CA--A-----ACTACAGTGTT
i Aplodontia_rufa.AprRuf_scaffold_101456                I 2 C 0
s Arctocebus_calabarensis.k141_587554                        7668 23 +      9265 A----A-T-TT-----CACA--------------CA--A-----ACTATAGTGTT
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                12929  9 -     29036 ----------------------------------------------TGGGGTAGT
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9544365 23 +  39197703 A----T-C-TC-----CACA--------------CA--A-----ACTGTAGTAGT
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             65639 23 +     85812 A----T-C-TC-----CACA--------------CA--A-----ACTGTAGTAGT
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                16649 23 +     89302 A----T-C-TC-----CACA--------------CA--A-----ACTGTAGTAGT
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             21153 23 -     58268 A----T-C-TC-----CACA--------------CA--A-----ACTGTAGTAGT
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             69147 23 +    119057 A----T-C-TC-----CACA--------------CA--A-----ACTGTAGTAGT
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              11116 23 -     25888 A----T-C-TC-----CACA--------------CA--A-----ACTGTAGTAGC
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                12193 23 -     16375 A----T-T-TC-----CACA--------------CA--A-----ACTATAGTGGT
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               5809 23 +      6337 A----T-T-TC-----CACA--------------CA--A-----ACTATAGTGGT
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26386088 23 +  51448160 a----t-t-tc-----cata--------------ca--a-----actgtagtTGT
i Balaenoptera_acutorostrata.KI537095.1                 I 1 C 0
s Balaenoptera_bonaerensis.DF502048.1                       11261 23 -     13118 a----t-t-tc-----cata--------------ca--a-----actgtagtTGC
i Balaenoptera_bonaerensis.DF502048.1                   I 1 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   50670 23 -     72089 G----T-T-TC-----CATA--------------TA--A-----ACTATAGTGAT
i Beatragus_hunteri.BeaHun_scaffold_21644               I 3 C 0
s Bison_bison.KN264915.1                                   305602 23 -   6870073 G----T-T-TC-----CATA--------------CA--A-----ATGGTAGTGAC
i Bison_bison.KN264915.1                                I 3 C 0
s Bos_indicus.CM003021.1                                 22959708 23 + 161108492 G----T-T-TC-----CATA--------------CA--A-----ATGGTAGTGAT
i Bos_indicus.CM003021.1                                I 3 C 0
s Bos_mutus.JH883513.1                                     421887 23 +    998990 G----T-T-TC-----CATA--------------CA--A-----ATGGTAGTGAC
i Bos_mutus.JH883513.1                                  I 3 C 0
s Bos_taurus.CM000177.6                                  22668360 23 + 158972876 G----T-T-TC-----CATA--------------CA--A-----ATGGTAGTGAT
i Bos_taurus.CM000177.6                                 I 3 C 0
s Bubalus_bubalis.KI419065.1                               677224 23 +   1914593 G----T-T-TC-----CATA--------------CA--A-----ATGGTAGTGAC
i Bubalus_bubalis.KI419065.1                            I 3 C 0
s Cacajao_ayresi.k141_724503                               118985 23 -    171031 A----C-C-TC-----CACA--------------CA--A-----ACTGTAGTAGT
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 18005 23 +    125063 A----C-C-TC-----CACA--------------CA--A-----ACTGTAGTAGT
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                20052 23 -    216513 A----C-C-TC-----CACA--------------CA--A-----ACTGTAGTAGT
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       12595 23 -    134917 A----C-C-TC-----CACA--------------CA--A-----ACTGTAGTAGT
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3225187 23 -   8989139 A----T-T-TG-----CATA--------------CA--A-----ACTGCAGTCGT
i Camelus_bactrianus.KN276303.1                         I 1 C 0
s Camelus_dromedarius.KN271192.1                           402887 23 -  15254737 A----T-T-TG-----CATA--------------CA--A-----ACTGCAGTCGT
i Camelus_dromedarius.KN271192.1                        I 1 C 0
s Camelus_ferus.KB016973.1                                2978625 23 +   6889770 A----T-T-TG-----CATA--------------CA--A-----ACTGCAGTCGT
i Camelus_ferus.KB016973.1                              I 1 C 0
s CanFam4.chr31                                          11528351 23 +  39901454 A----T-T-TC-----CATT--------------CA--A-----ACTGTTGTACT
i CanFam4.chr31                                         I 1 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   23325 23 +     87036 A----T-T-TC-----CATT--------------CA--A-----ACTGTTGTACT
i Canis_lupus_VD.CanFam_VD_scaffold_16982               I 1 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11275248 23 -  35597290 a----t-t-tc-----catt--------------ca--a-----aCTGTTGTACT
i Canis_lupus_dingo.QKWQ01001993.1                      I 1 C 0
s Canis_lupus_familiaris.chr31                           11097745 23 +  39895921 a----t-t-tc-----catt--------------ca--a-----aCTGTTGTACT
i Canis_lupus_familiaris.chr31                          I 1 C 0
s Canis_lupus_orion.HG994411.1                           16464530 23 -  44759192 a----t-t-tc-----catt--------------ca--a-----aCTGTTGTACT
i Canis_lupus_orion.HG994411.1                          I 1 C 0
s Capra_aegagrus.CM003214.1                              21336111 23 + 157394656 g----t-t-tc-----cata--------------ca--a-----actgtagTGAT
i Capra_aegagrus.CM003214.1                             I 3 C 0
s Capra_hircus.CM004562.1                               135714464 23 - 157403528 g----t-t-tc-----cata--------------ca--a-----actgtagTGAT
i Capra_hircus.CM004562.1                               I 3 C 0
s Capromys_pilorides.CapPil_scaffold_1011243                 1066 27 +      1208 A----T-T-TT-----CACA--------------CA--T-ACACACCATAGTAGT
i Capromys_pilorides.CapPil_scaffold_1011243            I 653 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               63921  9 +     67245 ----------------------------------------------TGGGGTAGT
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_1326                     1198 25 -    202837 T----C-T-TC---CTCACA--------------CA--A-----AGTGTAGTATT
i Castor_canadensis.CasCan_scaffold_1326                I 1 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   164931 17 -    276539 A----T-T-TC-----CAT---------------CA--A-----ACCGAA-----
i Catagonus_wagneri.CatWag_scaffold_1305                I 1 C 0
s Cavia_aperea.AVPZ01000278.1                            15791452 10 -  24422027 --------------------------------------t-----actGAAGT--T
i Cavia_aperea.AVPZ01000278.1                           I 514 C 0
s Cavia_porcellus.DS562889.1                             15803397 10 -  24440124 --------------------------------------t-----actGCAGT--T
i Cavia_porcellus.DS562889.1                            I 514 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       181569 10 +    436027 --------------------------------------T-----ACTGCAGT--T
i Cavia_tschudii.CavTsc_scaffold_488                    I 514 C 0
s Cebus_albifrons.Contig22                               18896720 22 -  29618158 A----T-C-TT-----CACA--------------AA--A-----AGTGTAGTAG-
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                13370 22 -     26817 A----T-C-TT-----CACA--------------AA--A-----AGTGTAGTAG-
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                17614 22 +     25043 A----T-C-TT-----CACA--------------AA--A-----AGTGTAGTAG-
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4370169 23 +   7569818 a----t-t-tc-----cata--------------ca--A-----ACGATAAAACT
i Ceratotherium_simum.JH767818.1                        I 1 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_171732          326 23 +      8380 A----T-T-TC-----CATA--------------CA--A-----ACGATAAAACT
i Ceratotherium_simum_cottoni.CerCot_scaffold_171732    I 1 C 0
s Cercocebus_atys.KQ010443.1                              6560613 23 +   6739814 A----T-C-CC-----CATA--------------CA--A-----ACTGTAGTAGT
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      32090 23 +     60454 A----T-C-CC-----CATA--------------CA--A-----ACTGTAGTAGT
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          7294 23 -     21101 A----T-C-CC-----CATA--------------CA--A-----ACTGTAGTAGT
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         64604 23 -    107033 A----T-C-CC-----CATA--------------CA--A-----ACTGTAGTAGT
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        7464 23 -     17608 A----T-C-CC-----CATA--------------CA--A-----ACTGTAGTAGT
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          4632 23 +     45019 A----T-C-CC-----CATA--------------CA--A-----ACTGTAGTAGT
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           4908 23 +     15177 A----T-C-CC-----CATA--------------CA--A-----ACTGTAGTAGT
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          7514 23 +     16677 A----T-C-CC-----CATA--------------CA--A-----ACTGTAGTAGT
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           29710 23 +     35983 A----T-C-CC-----CATA--------------CA--A-----ACTGTAGTAGT
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11996235 23 +  12117833 A----T-C-CC-----CATA--------------CA--A-----ACTGTAGTAGT
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46483217 23 +  46592721 A----T-C-CC-----CATA--------------CA--A-----ACTGTAGTAGT
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                       1328 23 -     27215 A----T-C-CC-----CATA--------------CA--A-----ACTGTAGTAGT
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       7528 23 +     35577 A----T-C-CC-----CATA--------------CA--A-----ACTGTAGTAGT
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        7322 23 -     25661 A----T-C-CC-----CATA--------------CA--A-----ACTGTAGTAGT
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        7494 23 -     17744 A----T-C-CC-----CATA--------------CA--A-----ACTGTAGTAGT
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        26863 23 +     37128 A----T-C-CC-----CATA--------------CA--A-----ACTGTAGTAGT
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           5881 23 -      6963 A----T-T-TC-----AACA--------------CA--G-----ACTGTAGTAGT
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      I 1 C 0
s Cheirogaleus_major.k141_1157592                           64409 23 -     68416 A----T-T-TC-----CACA--------------CA--A-----ACTATAGTGGT
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_854352                             711 23 +     27737 A----T-T-TC-----CACA--------------CA--A-----ACTATAGTGGT
i Cheirogaleus_medius.k141_854352                       C 0 C 0
s Cheracebus_lucifer.k141_619653                            10676 23 -     18223 A----T-C-TC-----CACA--------------CA--A-----ACTCTAGTAGT
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              2417 23 +    188999 A----T-C-TC-----CACA--------------CA--A-----ACTGTAGTAGT
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           46716 23 +     57117 A----T-C-TC-----CACA--------------CA--A-----ACTCTAGTAGT
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          51396 23 +     54541 A----T-C-TC-----CACA--------------CA--A-----ACTCTAGTAGT
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15966126 23 +  43084221 t----t-t-tc-----caca--------------ca--C-----ACTGTAGTAGT
i Chinchilla_lanigera.JH721867.1                        I 561 C 0
s Chiropotes_israelita.k141_1189915                         76197 23 +    196370 A----C-C-TC-----CACA--------------CA--A-----ACTGTAGTAGT
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          20378 23 +     40510 A----C-C-TC-----CACA--------------CA--A-----ACTGTAGTAGT
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15145048 23 -  15256731 A----T-C-TC-----CACA--------------CA--A-----ACTGTAGTAGT
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      39512 23 -     53260 A----T-C-TC-----CACA--------------CA--A-----ACTGTAGTAGT
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101150071 23 + 101219884 A----T-C-TC-----CACA--------------CA--A-----ACTGTAGTAGT
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                19909 23 -     21363 A----T-T-TC-----AACA--------------CA--A-----ACTATAGTAGT
i Choloepus_didactylus.ChoDid_scaffold_36182            I 1 C 0
s Choloepus_hoffmanni.KN194586.1                           765213 23 +    964067 a----t-t-tc-----aacA--------------CA--A-----ACTATAGTAGT
i Choloepus_hoffmanni.KN194586.1                        I 1 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_304221              2835 23 -      7053 A----T-T-TC-----AACA--------------CA--A-----ACTATCATAGT
i Chrysochloris_asiatica.ChrAsi_scaffold_304221         I 1 C 0
s Colobus_angolensis.KN985967.1                          10889842 23 +  10971483 A----T-C-TC-----CATA--------------CA--A-----ACTGTAGTAGT
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147667770 23 + 156195979 A----T-C-TC-----CATA--------------CA--A-----ACTGTAGTAGT
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            19753 23 +     23629 A----T-C-TC-----CATA--------------CA--A-----ACTGTAGTAGT
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60624178 19 +  78930452 a----c-t-tt-----tagaC--------------A--A-----ACTCTA----T
i Condylura_cristata.JH655880.1                         I 5 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         4583 23 -      5782 A----T-T-TT-----TATG--------------CA--A-----ACTATATTAAT
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    I 1 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 284181 23 -    399297 A----T-T-TC-----CTCT--------------CA--A-----AATGTAGTAGA
i Cricetomys_gambianus.CriGam_scaffold_949              I 1 C 0
s Cricetulus_griseus.LT883672.1                          53036467 23 +  72327488 A----C-C-CC-----CACA--------------CA--A-----AGTGTAGTAGC
i Cricetulus_griseus.LT883672.1                         I 1 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              4065 11 -     22648 C----T-T-TT-----TATAC--------------A-------------------
i Crocidura_indochinensis.CroInd_scaffold_27484         I 1 I 2
s Cryptoprocta_ferox.CryFer_flattened_line_19014            59566 23 -     70449 A----T-T-TC-----CATA--------------CA--A-----ACTGTAGTACT
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 1 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  216320 23 -    956709 A----T-T-TC-----CACA--------------CA--A-----GCTATAGTAAT
i Ctenodactylus_gundi.CteGun_scaffold_447               I 1 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 37845 21 -     67205 A----T-T-TT-----CAC----------------T--C-----ACTATAGTAGT
i Ctenomys_sociabilis.CteSoc_scaffold_19489             I 553 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                22674 21 +     26546 A----T-T-TA-----C--A--------------CA--C-----ACTGAAGTTGT
i Cuniculus_paca.CunPac_flattened_line_16637            I 540 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             63814 23 -    236241 A----T-T-TA-----CACA--------------CA--C-----ACTAAAGTTGT
i Dasyprocta_punctata.DasPun_flattened_line_634         I 536 C 0
s Dasypus_novemcinctus.JH568778.1                          186930 23 -   6883506 A----T-T-TC-----AACA--------------CA--A-----ACTGTAGTAGT
i Dasypus_novemcinctus.JH568778.1                       I 1 C 0
s Daubentonia_madagascariensis.ctg11                     16850356 23 +  31942871 A----T-T-TC-----CACA--------------CA--A-----ACTGTAGTGGT
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80042680 23 -  96802777 a----t-t-tc-----cata--------------ca--a-----actgtagcTGT
i Delphinapterus_leucas.KZ290064.1                      I 1 C 0
s Desmodus_rotundus.KZ672188.1                           18703139  9 -  18957592 ----------------------------------------------TGTGGTACT
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 328568 23 +    993696 a----t-t-tc-----cata--------------ca--a-----actataaaact
i Dicerorhinus_sumatrensis.PEKH010003161.1              I 1 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   9202 23 +    151128 A----T-T-TC-----CATA--------------CA--A-----ACGATAAAACT
i Diceros_bicornis.DicBicMic_scaffold_9545              I 1 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   161605 23 +    228994 A----T-T-TC-----CACA--------------CA--C-----ATGGAAGTAGA
i Dinomys_branickii.DinBra_scaffold_1996                I 566 C 0
s Dipodomys_ordii.KN672545.1                              3661469 23 +   4240102 A----T-T-TC-----CATA--------------CA--A-----ACTCTAGCATT
i Dipodomys_ordii.KN672545.1                            I 5 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  3843 23 -     11986 A----T-T-TC-----CATA--------------CA--A-----ACTCTAGCATT
i Dipodomys_stephensi.DipSte_scaffold_84338             I 5 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                42386 23 -     73477 A----T-T-TA-----CACA--------------TGCAT-----ACTGCAGT--T
i Dolichotis_patagonum.DolPat_scaffold_14102            I 545 C 0
s Echinops_telfairi.JH980316.1                           23005107 23 -  44670279 A----T-T-TC-----AACA--------------CA--A-----AATGTAATAAT
i Echinops_telfairi.JH980316.1                          I 1 C 0
s Eidolon_helvum.KE772537.1                                 15291 21 +     24177 a----t-t-tt-----cata--------------ca--a-----acTGTAGTA--
i Eidolon_helvum.KE772537.1                             I 1 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1498626 23 +   1727528 g----t-t-tc-----cata--------------ca--a-----actgtagTGAC
i Elaphurus_davidianus.JRFZ01086400.1                   I 3 I 49
s Elephantulus_edwardii.JH947210.1                        7836621 23 +  15467074 G----T-T-TC-----AATA--------------TA--A-----AGTGTTATATA
i Elephantulus_edwardii.JH947210.1                      I 1 C 0
s Ellobius_lutescens.LOEQ01003611.1                        245177 23 -    369425 A----C-T-TC-----CACA--------------CA--A-----AGTGTAGTAGC
i Ellobius_lutescens.LOEQ01003611.1                     I 1 C 0
s Ellobius_talpinus.LOJH01076532.1                           1529 23 +      9159 a----c-t-tC-----CACA--------------CA--A-----AGTGTAGTAGC
i Ellobius_talpinus.LOJH01076532.1                      I 1 C 0
s Enhydra_lutris.KZ291749.1                              85879493 23 +  99434291 A----T-T-TC-----CATG--------------CA--A-----ACTGTAGTACT
i Enhydra_lutris.KZ291749.1                             I 1 C 0
s Eptesicus_fuscus.JH977687.1                             4710899  9 +   6522550 ----------------------------------------------TGTAGTAGT
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5858429 23 -   7175178 c----t-t-tc-----cata--------------CA--A-----ACTGTAGTAAT
i Equus_asinus.JREZ01000062.1                           I 1 C 0
s Equus_caballus.CM000402.2                              13356915 23 +  41866177 c----t-t-tc-----cata--------------CA--A-----ACTGTAGTACC
i Equus_caballus.CM000402.2                             I 1 C 0
s Equus_przewalskii.ATBW01073585.1                          18405 23 +     92910 c----t-t-tc-----cata--------------CA--A-----ACTGTAGTACC
i Equus_przewalskii.ATBW01073585.1                      I 1 C 0
s Erinaceus_europaeus.JH835290.1                         11543910 23 +  16010500 A----T-T-Cc-----cata-------------c-a--a-----actattgttat
i Erinaceus_europaeus.JH835290.1                        I 1 C 0
s Erythrocebus_patas.Contig8                             48782081 23 -  48907691 A----T-C-CC-----CACA--------------CA--A-----ACTGTAGTAGT
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          320931 23 +    330699 A----T-T-TC-----CATA--------------CA--A-----ACTGTAGTTGT
i Eschrichtius_robustus.EscRob_flattened_line_685       I 1 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             67383 23 +     89355 A----T-T-TC-----CATA--------------CA--A-----ACTGTAGTTGT
i Eubalaena_japonica.EubJap_flattened_line_7756         I 1 C 0
s Eulemur_albifrons.k141_715837                             10473 23 +     13586 A----T-T-TC-----CACA--------------CA--A-----ACTATAGTGGT
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_1015201                              3732 23 -      4292 A----T-T-TC-----CACA--------------CA--A-----ACTATAGTGAT
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            16869 23 +     36558 A----T-T-TC-----TACA--------------CA--A-----ACTATAGTGGT
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            13191 23 +     60246 A----T-T-TC-----CACA--------------CA--A-----ACTATAGTGAT
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                16676 23 +    109717 A----T-T-TC-----CACA--------------CA--A-----ACTATAGTGGT
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 4659 23 -     19505 A----T-T-TC-----CACA--------------CA--A-----ACTATAGTGAT
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                21334 23 +     27497 A----T-T-TC-----CACA--------------CA--A-----ACTATAGTGGT
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           23790 23 +     26808 A----T-T-TC-----CACA--------------CC--A-----ACTATAGTGGT
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                38522 23 +     46535 A----T-T-TC-----CACA--------------CA--A-----ACTATAGTGAT
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              21263 23 -     29447 A----T-T-TC-----CACA--------------CA--A-----ACTATAGTGAT
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129901203 23 - 159252932 A----T-T-TC-----CATA--------------CA--A-----ACTGTAATACT
i Felis_catus.CM001386.2                                I 1 C 0
s Felis_catus_fca126.CM031420.1                         129288180 23 - 158578461 A----T-T-TC-----CATA--------------CA--A-----ACTGTAATACT
i Felis_catus_fca126.CM031420.1                         I 1 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 29370 23 +     52776 A----T-T-TC-----CATA--------------CA--A-----ACTGTAATACT
i Felis_nigripes.FelNig_flattened_line_8080             I 1 C 0
s Fukomys_damarensis.KN123630.1                          13898101 23 -  19261668 A----T-T-TC-----TACA--------------TA--T-----ACTGTAGTAAT
i Fukomys_damarensis.KN123630.1                         I 594 C 0
s Galago_moholi.ctg555                                     216524 23 -    847004 A----A-T-TT-----CACA--------------CA--A-----ACCGTAGTGGT
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           18886 23 -     43889 A----A-T-TT-----CACA--------------CA--A-----ACCGTAGTGGT
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          16027 23 +     27357 A----A-T-TT-----CACA--------------CA--A-----ACCGTAGTGAT
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               160796 23 +    324696 A----T-T-TC-----TATA--------------CA--A-----ATTGTAGTATT
i Galeopterus_variegatus.GalVar_scaffold_354            I 1 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    188400 23 -    189561 g----t-t-tc-----cata--------------ca--a-----attgtagtAAT
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 3 C 0
s Glis_glis.GliGli_scaffold_79770                           17717 23 -     18683 A----T-T-TC-----CACA--------------CA--A-----ACTGTAGTCGC
i Glis_glis.GliGli_scaffold_79770                       I 2 C 0
s Gorilla_beringei.k141_111300                              10484 23 -     14630 A----T-C-TC-----CATA--------------CA--A-----ACTGTAGTAGT
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119657584 23 - 195582420 A----T-C-TC-----CATA--------------CA--A-----ACTGTAGTAGT
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   81019 23 +    118900 A----T-T-TC-----CACA--------------CA--A-----ACTGCAGTAGT
i Graphiurus_murinus.GraMur_scaffold_4493               I 2 C 0
s Hapalemur_alaotrensis.k141_1280836                         7265 23 +     10286 A----T-T-TC-----CACA--------------CA--A-----ACTATAGTGGT
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             5746 23 -     11661 A----T-T-TC-----CACA--------------CA--G-----ACTATAGTGGT
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                            11070 23 +     56096 A----T-T-TC-----CACA--------------CA--A-----ACTATAGTGGT
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        34319 23 -     42470 A----T-T-TC-----CACA--------------CA--A-----ACTATAGTGGT
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        50945 23 -     54384 A----T-T-TC-----CACA--------------CA--A-----ACTATAGTGGT
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              24684 23 +     53719 A----T-T-TT-----CATA--------------CG--A-----ACTATAGTACT
i Helogale_parvula.HelPar_flattened_line_22962          I 1 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                35497 23 -     91191 G----T-T-TC-----CATA--------------CA--A-----ACTGTAGTGAC
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 3 C 0
s Heterocephalus_glaber.JH602058.1                        2562386 23 +  31725842 A----T-T-TC-----TATA--------------CA--C-----ACTGTAGTAGT
i Heterocephalus_glaber.JH602058.1                      I 551 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               64266 23 +     73687 A----T-T-CC-----AATG--------------CA--A-----ATTTTAGTAGG
i Heterohyrax_brucei.HetBruBak_scaffold_25354           I 1 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              152754 23 +    277961 A----T-T-TC-----CACA--------------CA--A-----ACTGTAGTTAT
i Hippopotamus_amphibius.HipAmp_scaffold_1308           I 1 C 0
s Hipposideros_armiger.JXIK01001085.1                      286223 23 -    477199 a----t-t-tc-----cata--------------cA--A-----ATTGTAGTAGT
i Hipposideros_armiger.JXIK01001085.1                   I 1 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959               3496 23 +     26078 A----T-T-TC-----CATA--------------CA--A-----ATTGTAGTAGT
i Hipposideros_galeritus.HipGal_scaffold_52959          I 1 C 0
s Hoolock_leuconedys.ctg315                                   351500 23 +    431944 A----T-C-TC-----CAAA--------------CA--A-----ACTGTAGTAGT
i Hoolock_leuconedys.ctg315                                I 128 I 6
s Hyaena_hyaena.HyaHya_flattened_line_20729                 25119 23 -     67322 A----T-T-TC-----CATA--------------CA--A-----ACCATAGTACT
i Hyaena_hyaena.HyaHya_flattened_line_20729             I 1 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           23029 37 -    119109 A----T-T-TA-----CACACACACGCACACACACACAC-----ACTGCAGT--T
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       I 546 C 0
s Hylobates_abbotti.k141_1816750                             2980 22 +      3202 A----T-C-TC-----CAAA--------------CA--A-----ACTGTAGCA-T
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1136966                               989 23 +      9785 A----T-C-TC-----CAAA--------------CA--A-----ACTGTAGTAGT
i Hylobates_agilis.k141_1136966                         C 0 C 0
s Hylobates_klossii.k141_468230                              4469 23 +      5464 A----T-C-TC-----CAAA--------------CA--A-----ACTGTAGTAGT
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14629815 23 -  25970782 A----T-C-TC-----CAAA--------------CA--A-----ACTGTAGTAGT
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            2367 22 +      4161 A----T-C-TC-----CAAA--------------CA--A-----ACTGTAGCA-T
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                    11310 25 +     22540 A----T-T-TC-----CACACA------------CA--C-----ACTGTAGTAGT
i Hystrix_cristata.HysCri_scaffold_50788                I 560 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7131582 23 +  13083262 a----t-t-tc-----caca--------------ta--a-----aCTGCAGTATC
i Ictidomys_tridecemlineatus.JH393315.1                 I 2 C 0
s Indri_indri.k141_2197838                                   2804 23 +      3484 A----T-T-TC-----CACA--------------CA--C-----ACTATAGCGGT
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              14907 23 +     17520 A----T-T-TC-----CATA--------------CA--A-----ACTGTAGTTGT
i Inia_geoffrensis.IniGeo_flattened_line_66725          I 3 C 0
s Jaculus_jaculus.JH725517.1                              8580374 20 +  11848649 ---------TC-----CACA--------------CA--A-----AATGCGGTAGC
i Jaculus_jaculus.JH725517.1                            I 3 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               29527 23 +     37189 A----T-T-TC-----CATA--------------CA--A-----ACTGTAGTTGT
i Kogia_breviceps.KogBre_flattened_line_35920           I 1 C 0
s Lagothrix_lagothricha.k141_12968                          55237 23 -    147782 A----T-C-TC-----CACA--------------CA--A-----ACTGTAGTAGT
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    7450  9 +     26176 ----------------------------------------------TGTAGTAGT
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258412623 23 - 285822530 A----T-T-TC-----CACA--------------CA--A-----ACTATAGTGGT
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        29947 23 +     39228 A----T-T-TC-----CACA--------------CA--A-----ACTATAGTGGT
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            59311 23 +     63517 A----T-T-TC-----CACA--------------CA--A-----ACTATAGTGGT
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        37695 23 -     38897 A----T-T-TC-----CACA--------------CA--A-----ACTATAGTGGT
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      3737 23 -     13103 A----T-T-TC-----CACA--------------CA--A-----ACTATAGTGGT
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3093750 23 -   3498232 A----T-T-TC-----TATG--------------CA--A-----ACTGTAGTACT
i Leptonychotes_weddellii.KB714749.1                    I 1 C 0
s Lepus_americanus.LepAme_scaffold_62849                    22223 23 +     22452 A----T-T-TC-----CATG--------------CA--A-----ACTGTGGTAGT
i Lepus_americanus.LepAme_scaffold_62849                I 1 C 0
s Lipotes_vexillifer.KE558548.1                            141835 23 +   3060487 a----t-t-tc-----cata--------------ca--a-----actgtagtTGT
i Lipotes_vexillifer.KE558548.1                         I 1 C 0
s Lophocebus_aterrimus.ctg55                             19253702 23 +  19376315 A----T-C-CC-----CATA--------------CA--A-----ACTGTAGTAGT
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           16489 23 +     84689 A----A-T-TT-----TGCA--------------CA--A-----ACTGTAGTGGT
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3784222 23 +   6799190 A----A-T-TT-----TGCA--------------CA--A-----ACTGTAGTGGT
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20600006 23 -  62548349 a----t-t-tc-----aacA--------------CA--A-----ACTGTAGTTGT
i Loxodonta_africana.GL010040.1                         I 1 C 0
s Lycaon_pictus.CM007556.1                               11097201 23 +  39895028 a----t-t-tc-----catt--------------ca--a-----aCTGTTGTACT
i Lycaon_pictus.CM007556.1                              I 1 C 0
s Macaca_arctoides.k141_2201161                             25451 23 +     74745 A----T-C-CC-----CATA--------------CA--A-----ACTGTAGTAGT
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12711914 23 +  12821369 A----T-C-CC-----CATA--------------CA--A-----ACTGTAGTAGT
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                4487 23 -     26467 A----T-C-CC-----CATA--------------CA--A-----ACTGTAGTAGT
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           52358 23 +     63263 A----T-C-CC-----CATA--------------CA--A-----ACTGTAGTAGT
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 4468 23 -     26361 A----T-C-CC-----CATA--------------CA--A-----ACTGTAGTAGT
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_2667654                                 771 23 -      5626 A----T-C-CC-----CATA--------------CA--A-----ACTGTAGTAGT
i Macaca_leonina.k141_2667654                           C 0 C 0
s Macaca_maura.k141_251854                                  50887 23 -     79256 A----T-C-CC-----CATA--------------CA--A-----ACTGTAGTAGT
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196040985 23 + 196197964 A----T-C-CC-----CATA--------------CA--A-----ACTGTAGTAGT
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11451155 23 +  11645122 A----T-C-CC-----CATA--------------CA--A-----ACTGTAGTAGT
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   9841 23 -     46448 A----T-C-CC-----CATA--------------CA--A-----ACTGTAGTAGT
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                7502 23 -     13212 A----T-C-CC-----CATA--------------CA--A-----ACTGTAGTAGT
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 21184 23 -     55006 A----T-C-CC-----CATA--------------CA--A-----ACTGTAGTAGT
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43846606 23 +  43892939 A----T-C-CC-----CATA--------------CA--A-----ACTGTAGTAGT
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               22468 23 -     24607 A----T-C-CC-----CATA--------------CA--A-----ACTGTAGTAGT
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               9838 23 -     27140 A----T-C-CC-----CATA--------------CA--A-----ACTGTAGTAGT
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                703907 21 +    802869 A----T-T-TT-----CATA--------------CA--A-----ACTGTAGTA--
i Macroglossus_sobrinus.MacSob_scaffold_879             I 1 C 0
s Mandrillus_leucophaeus.scaffold125                     43442871 23 -  43563597 A----T-C-CC-----CATA--------------CA--A-----ACTGTAGTAGT
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4455670 23 -   4543643 A----T-C-CC-----CATA--------------CA--A-----ACTGTAGTAGT
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            154185 23 +    252755 a----c-t-tc-----CATG--------------CA--G-----ACTGTAATACT
i Manis_javanica.JSZB01003966.1                         I 1 C 0
s Manis_pentadactyla.KN017078.1                             41783 23 +     58827 a----c-t-tc-----CATG--------------CA--G-----ACTGTAATACT
i Manis_pentadactyla.KN017078.1                         I 1 C 0
s Marmota_marmota.CZRN01000005.1                         36879448 23 +  64221397 a----t-t-tc-----caca--------------ta--a-----aCTGCAGTATC
i Marmota_marmota.CZRN01000005.1                        I 2 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       67704 23 -    234502 A----T-T-TC-----CATG--------------CA--A-----ACTGTAGGAAT
i Megaderma_lyra.MegLyr_scaffold_3562                   I 6 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             8588 23 -     87323 A----T-T-TC-----CATG--------------CA--A-----ACTCTAGTACT
i Mellivora_capensis.MelCap_flattened_line_15433        I 1 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 3402 23 +    115071 A----T-T-CC-----TACC--------------CA--A-----AGTGTAGTAGA
i Meriones_unguiculatus.MerUng_scaffold_9483            I 1 C 0
s Mesocricetus_auratus.KB708139.1                         1053041 23 -  26018355 A----T-T-CT-----CACA--------------CA--A-----AGTGGAGTGGC
i Mesocricetus_auratus.KB708139.1                       I 1 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    4498 23 -     12939 A----T-T-TC-----CATA--------------CA--A-----ACTGTAGTTGT
i Mesoplodon_bidens.MesBid_scaffold_96348               I 1 C 0
s Microcebus_murinus.CM007691.1                          16515664 23 +  47401472 a----t-t-tc-----caca--------------cA--A-----ACTATAGTGGT
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  46721 23 -     48017 A----T-T-TT-----AACA--------------AC--A-----AGTGGTATAAT
i Microgale_talazaci.MicTal_scaffold_34660              I 1 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               26876  9 -     32043 ----------------------------------------------TGGGGTAGT
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22826013 23 -  98408828 A----C-T-TC-----CACA--------------TA--G-----AGTGTAGTAGC
i Microtus_ochrogaster.CM001673.1                       I 1 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8215228  7 +  10048721 ------------------------------------------------TAGTAGT
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            39687  7 +     45743 ------------------------------------------------TAGTAGT
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         7420 23 +     29742 A----T-C-CC-----CATA--------------CA--A-----ACTGTAGTAGT
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        19149 23 -    104932 A----T-T-TC-----TATG--------------CA--A-----ACTGTAGTACT
i Mirounga_angustirostris.MirAng_flattened_line_8852    I 1 C 0
s Mirza_zaza.k141_593947                                     6359 23 -     12809 A----T-T-TC-----CATG--------------CA--A-----ACTATAGTGGT
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 152273 23 +    154973 A----T-T-TC-----CATA--------------CA--A-----ACTGTAGCTGT
i Monodon_monoceros.MonMon_M_scaffold_5598              I 1 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                165386  9 +    265003 ----------------------------------------------TGTATTAGT
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  9073 23 -     19904 G----T-T-TC-----CATG--------------CA--A-----ACTGTAGTGAT
i Moschus_moschiferus.MosMos_scaffold_78805             I 3 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  152413 23 -    168139 A----T-T-TT-----CATA--------------CG--A-----ACTATAGTACT
i Mungos_mungo.MunMun_flattened_line_8729               I 1 C 0
s Murina_feae.MurFea_scaffold_2254                          26218  9 -    100666 ----------------------------------------------TGTATTAGT
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70773283 23 +  92629107 A----T-T-TC-----CAAA--------------CA--A-----AATGTAGTAGC
i Mus_caroli.LT608236.1                                 I 1 C 0
s Mus_musculus.chr16                                     75495347 23 +  98207768 A----T-T-TC-----CAAA--------------CA--A-----AATGTAGTAGT
i Mus_musculus.chr16                                    I 1 C 0
s Mus_pahari.LT608305.1                                  67562074 23 +  89017189 a----t-t-tc-----caaa--------------ga--a-----aatgttGTATC
i Mus_pahari.LT608305.1                                 I 1 C 0
s Mus_spretus.CM004110.1                                 74338055 23 +  97876770 A----T-T-TC-----CAAG--------------CA--A-----AATGTAGTAGC
i Mus_spretus.CM004110.1                                I 1 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             16083 24 +     98495 A----T-TTTC-----TACA--------------CC--A-----ACTTCAGTAGT
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 2 C 0
s Mustela_putorius.JH417978.1                             4430691 23 -  28371801 A----T-T-TC-----CATG--------------CA--A-----ACTGTAGTACT
i Mustela_putorius.JH417978.1                           I 1 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     97770 25 -    117718 A----T-T-TT-----CACA--------------CA--T---AAACTATAGTAGT
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 724 C 0
s Myotis_brandtii.KE161952.1                               973232  9 +   8389877 ----------------------------------------------TGTAGTAGT
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5024308  9 +   6462685 ----------------------------------------------TGTAGTAGT
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3470729  9 -   3747815 ----------------------------------------------TGTAGTAGT
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        15966  9 +     66751 ----------------------------------------------TGTAGTAGT
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_12795               329 23 -     87886 A----T-T-TC-----AACA--------------CA--A-----ACTATAATAAC
i Myrmecophaga_tridactyla.MyrTri_scaffold_12795         I 1 C 0
s Nannospalax_galili.KL201303.1                            125758 23 +    362372 a----t-t-tc-----caCA--------------CA--A-----AATATAGTAGC
i Nannospalax_galili.KL201303.1                         I 1 C 0
s Nasalis_larvatus.k141_153429                              11681 23 +     48152 A----T-C-TC-----CATA--------------CA--A-----ACTGTAGTAGT
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4492544 23 -  14209539 A----T-T-TC-----TATG--------------CA--A-----ACTGTAGTACT
i Neomonachus_schauinslandi.NINY01007774.1              I 1 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3956864 23 -   4490290 a----t-t-tc-----cata--------------ca--a-----actgtagcTGT
i Neophocaena_asiaeorientalis.KZ688543.1                I 1 C 0
s Nomascus_annamensis.k141_762468                            1486 23 -      2755 A----T-C-TC-----TAAA--------------CA--A-----ACTGTAGTAGT
i Nomascus_annamensis.k141_762468                       C 0 C 0
s Nomascus_concolor.k141_256540                              8096 23 -      8966 A----T-C-TC-----TAAA--------------CA--A-----ACTGTAGTAGT
i Nomascus_concolor.k141_256540                         C 0 C 0
s Nomascus_gabriellae.k141_1400361                           2037 23 -      2203 A----T-C-TC-----CAAA--------------CA--A-----ACTGTAGTAGT
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_2374                            4556 23 +      8673 A----T-C-tc-----caaa--------------ca--a-----actgtagtagt
i Nomascus_siki_b.tarseq_2374                       I 370 C 0
s Nomascus_siki_a.k141_421408                                  1951 23 +     16235 A----T-C-TC-----TAAA--------------CA--A-----ACTGTAGTAGT
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                40071 28 +   3668941 a----t-t-tc-----catt--------------ca--attCAAACTCTTGTACT
i Nyctereutes_procyonoides.CAJHUB010000786.1            I 1 C 0
s Nycticebus_bengalensis.LG16                            65573264 23 -  95554990 A----A-T-TT-----CATA--------------CA--A-----ACTGTAGTGGT
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_6040852                             900 23 +      1868 A----A-T-TT-----CATA--------------CA--A-----ACTGTAGTGGT
i Nycticebus_coucang.k141_6040852                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65681443 23 +  89412551 A----A-T-TT-----CATA--------------CA--A-----ACTGTAGTGGT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            5001281 23 -  23139505 a----t-t-tc-----ctca--------------tA--A-----ACTAGGGTAGG
i Ochotona_princeps.JH802095.1                          I 1 C 0
s Octodon_degus.JH651621.1                                3692914 23 +  10294119 A----T-T-TT-----CACA--------------CA--C-----ACTATAGAAGT
i Octodon_degus.JH651621.1                              I 553 C 0
s Odobenus_rosmarus.KB229369.1                             686793 10 -   3126709 ---------------------------------------------CTGTAGTACT
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1086057 23 +   1425656 g----t-t-tc-----cata--------------ca--a-----actgtagTGAC
i Odocoileus_virginianus.KZ101650.1                     I 3 I 4
s Okapia_johnstoni.LVCL01S0017931.1                         44130 23 +     78940 g----t-t-tc-----cata--------------ca--a-----attgtagtGAC
i Okapia_johnstoni.LVCL01S0017931.1                     I 3 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  131819 23 +    145789 A----C-T-TC-----CACA--------------CA--A-----AGTGTAGTAGC
i Ondatra_zibethicus.OndZib_scaffold_6821               I 1 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  44753 23 +     62360 A----C-T-TC-----CACA--------------CA--A-----AGGATAGTAGC
i Onychomys_torridus.OnyTor_scaffold_12578              I 1 C 0
s Orcinus_orca.KB316965.1                                 7230538 23 -   7562323 a----t-t-tc-----caca--------------ca--A-----ACTGTAGCTGT
i Orcinus_orca.KB316965.1                               I 1 C 0
s Orycteropus_afer.OryAfe_flattened_line_371885              1743 27 +      3658 AATTTT-T-TT-----AAGA--------------AA--A-----GCTATAGCAGT
i Orycteropus_afer.OryAfe_flattened_line_371885         I 1 C 0
s Oryctolagus_cuniculus.CM000803.1                      141885239 23 + 163896628 a----t-t-tc-----catg--------------CA--A-----ACTGTGGTAGT
i Oryctolagus_cuniculus.CM000803.1                      I 1 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      317208 23 -    505867 a----t-t-tc-----catt--------------ca--a-----aCTGTTGTACT
i Otocyon_megalotis.JAEUCK010005121.1                   I 1 C 0
s Otolemur_crassicaudatus.k141_505435                        6385 23 -     53940 A----A-T-TT-----CACA--------------CA--A-----ACCGTAGTGGT
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18014351 23 -  38779656 a----a-t-tt-----caca--------------ca--a-----acCATAGTGGT
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134085279 23 - 275406953 g----t-t-tc-----cata--------------ca--a-----actgtagTGAC
i Ovis_aries.CM001582.2                                 I 3 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      86525 23 +    140051 G----T-T-TC-----CATA--------------CA--A-----ACTGTAGTGAC
i Ovis_canadensis.OviCan_scaffold_6251                  I 3 C 0
s Pan_paniscus.CM003386.1                               127579763 23 - 205426864 A----T-C-TT-----CATA--------------CA--A-----ACTGTAGTAGT
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120156923 23 - 196562556 A----T-C-TT-----CATA--------------CA--A-----ACTGTAGTAGT
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  41970 23 +    295523 A----T-T-TC-----CATA--------------CA--A-----ACTGTAGTACT
i Panthera_onca.PanOnc_flattened_line_1615              I 1 C 0
s Panthera_pardus.KV860323.1                              3645784 23 +  18214204 A----T-T-TC-----CATA--------------CA--A-----ACTGTAGTACT
i Panthera_pardus.KV860323.1                            I 1 C 0
s Panthera_tigris.KE721879.1                              5035421 23 -   6340057 A----T-T-TC-----CATA--------------CA--A-----ACTGTAGTACT
i Panthera_tigris.KE721879.1                            I 1 C 0
s Pantholops_hodgsonii.KE114631.1                         1074164 23 -   1292953 g----t-t-tc-----cata--------------ca--a-----actgtagTGAC
i Pantholops_hodgsonii.KE114631.1                       I 3 C 0
s Papio_anubis.CM001492.2                               188161663 23 - 188283584 A----T-C-CC-----CATA--------------CA--A-----ACTGTAGTAGT
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              4753 23 +     25005 A----T-C-CC-----CATA--------------CA--A-----ACTGTAGTAGT
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47519035 23 +  47705337 A----T-C-CC-----CATA--------------CA--A-----ACTGTAGTAGT
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 73026 23 -    104429 A----T-C-CC-----CATA--------------CA--A-----ACTGTAGTAGT
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   11558 23 +     14967 A----T-C-CC-----CATA--------------CA--A-----ACTGTAGTAGT
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 7423 23 -      7628 A----T-C-CC-----CATA--------------CA--A-----ACTGTAGTAGT
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    123441 19 -    135482 A----T-T-TC-----C------------------A--A-----ACTGTAATCCT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 I 1 C 0
s Perodicticus_ibeanus.k141_117958                          12049 23 -     23713 A----A-T-TT-----CACA--------------CA--A-----ACTGTAGTGGT
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           13200 23 +     61070 A----A-T-TT-----CACA--------------CA--A-----ACTGTAGTGGT
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       3465 23 +     49596 A----T-T-TC-----CATA--------------CA--A-----ACTCTAGTAGT
i Perognathus_longimembris.PerPac_flattened_line_19359  I 5 C 0
s Peromyscus_maniculatus.KI615458.1                       2840566 23 -   3366660 A----C-T-TC-----CACA--------------CA--A-----AGGGTAGTAGC
i Peromyscus_maniculatus.KI615458.1                     I 1 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    19179 23 -     36578 A----T-T-TC-----CAGA--------------CG--T-----GTGATAGTAGT
i Petromus_typicus.PetTyp_scaffold_33007                I 986 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              5001 23 +      8220 A----T-T-TC-----CATA--------------CA--A-----ACTGTAGCTGT
i Phocoena_phocoena.PhoPho_flattened_line_53071         I 5 C 0
s Piliocolobus_badius.k141_1987485                           5221 23 -      5908 A----T-C-TC-----CATA--------------CA--A-----ACTGTAGTAGT
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       5840 23 -     17985 A----T-C-TC-----CATA--------------CA--A-----ACTGTAGTAGT
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            5207 23 +      7694 A----T-C-TC-----CATA--------------CA--A-----ACTGTAGTAGT
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26743690 23 +  26888534 A----T-C-TC-----CATA--------------CA--A-----ACTGTAGTAGT
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306           101462  9 +    112873 ----------------------------------------------TGTTGTAGT
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990          11497 23 +     21690 A----T-T-TC-----CATA--------------CA--A-----ACTGTAGTTGT
i Platanista_gangetica.PlaMin_flattened_line_72990      I 1 C 0
s Plecturocebus_bernhardi.k141_959214                       27328 23 +     44506 A----T-C-TC-----CACA--------------CA--A-----ACTGTAGTAGT
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        27541 23 +     67491 A----T-C-TC-----CACA--------------CA--A-----ACTGTAGTAGT
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      17780 23 -     98129 A----T-C-TC-----CACA--------------CA--A-----ACTGTAGTAGT
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     27381 23 +    147771 A----T-C-TC-----CACA--------------CA--A-----ACTGTAGTAGT
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         4016 23 -     43940 A----T-C-TC-----CACA--------------CA--A-----ACTGTAGTAGT
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          8099 23 -     55515 A----T-C-TC-----CACA--------------CA--A-----ACTGTAGTAGT
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         27453 23 +    152463 A----T-C-TC-----CACA--------------CA--A-----ACTGTAGTAGT
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       5260 23 -    119457 A----T-C-TC-----CACA--------------CA--A-----ACTGTAGTAGT
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         17175 23 +    134592 A----T-C-TC-----CACA--------------CA--A-----ACTGTAGTAGT
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          27763 23 -     75465 A----T-C-TC-----CACA--------------CA--A-----ACTGTAGTAGT
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              192394 23 -    373494 A----T-C-TC-----CATA--------------CA--A-----ACTGTAGTAGT
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19813043 23 +  19899266 A----T-C-TC-----CATA--------------CA--A-----ACTGTAGTAGT
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               8963 23 -     15069 A----T-C-TC-----CATA--------------CA--A-----CCTGTAGTAGT
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              9078 23 +     14865 A----T-C-TC-----CATA--------------CA--A-----CCTGTAGTAGT
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                5370 23 -      9567 A----T-T-CC-----AATG--------------CA--A-----ATTTTAGTAGA
i Procavia_capensis.ProCapCap_scaffold_149274           I 1 C 0
s Prolemur_simus.MPIZ01000048.1                           6853999 23 +  12164890 a----t-t-tc-----caca--------------cA--A-----ACTATAGTGGT
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     22800 23 -     30946 a----t-t-tc-----caca--------------cA--A-----ACTATAGTGGT
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         9101 23 +     11805 A----T-T-TC-----CACA--------------CA--A-----ACTATAGTGGT
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           48435 23 +     52369 A----T-T-TC-----CACA--------------CA--A-----ACTATAGTGGT
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         40822 23 -     44753 A----T-T-TC-----CACA--------------CA--A-----ACTATAGTGGT
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            22745 23 +     27322 A----T-T-TC-----CACA--------------CA--A-----ACTATAGTGGT
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       22391 23 -     53241 A----T-T-TC-----CACA--------------CA--A-----ACTATAGTGGT
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         44654 23 -     48185 A----T-T-TC-----CACA--------------CA--A-----ACTATAGTGCT
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           40378 23 +     77221 C----T-T-CC-----TACC--------------CA--A-----AGGGTAGTATA
i Psammomys_obesus.NESX01026517.1                       I 1 C 0
s Pteronotus_parnellii.KE867983.1                            8042  9 -     27784 ----------------------------------------------TGTAGTAGT
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        252337 23 -    344369 A----T-T-TC-----CATG--------------CA--A-----ACTGTAGTACT
i Pteronura_brasiliensis.PteBra_flattened_line_1343     I 1 C 0
s Pteropus_alecto.KB031157.1                             13249002 21 -  17261082 a----t-t-tt-----cata--------------ca--a-----aCTGTAGTA--
i Pteropus_alecto.KB031157.1                            I 1 C 0
s Pteropus_vampyrus.KN525959.1                             606952 21 -   3946241 a----t-t-tt-----cata--------------ca--a-----aCTGTAGTA--
i Pteropus_vampyrus.KN525959.1                          I 1 C 0
s Puma_concolor.QAVW01000427.1                          131542115 23 - 161321710 A----T-T-TC-----CATA--------------CA--A-----ACTGTAGTACT
i Puma_concolor.QAVW01000427.1                          I 1 C 0
s Pygathrix_cinerea.k141_374971                             33069 23 +     56732 A----T-C-TC-----CATA--------------CA--A-----ACTGTAGTAGT
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6809566 23 +   6970761 A----T-C-TC-----CATA--------------CA--A-----ACTGTAGTAGT
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             8955 23 +     18040 A----T-C-TC-----CATA--------------CA--A-----ACTGTAGTAGT
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                22905 23 +     68503 G----T-T-TC-----CATA--------------CA--A-----ACTGTAGTGAC
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 3 I 4
s Rattus_norvegicus.chr11                                13920769 23 +  90463843 A----T-T-TC-----CAAA--------------CA--A-----AACGTAGTATC
i Rattus_norvegicus.chr11                               I 1 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1794829 23 +   2252614 a----t-t-tc-----cata--------------cC--A-----ACTGTAGTGGT
i Rhinolophus_sinicus.LVEH01000179.1                    I 1 C 0
s Rhinopithecus_bieti.k119_554384                            3334 23 -     17045 A----T-C-TC-----CATA--------------CA--A-----ACTGTAGTAGT
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206380821 23 - 206558726 A----T-C-TC-----CATA--------------CA--A-----ACTGTAGTAGT
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44859724 23 -  45163003 A----T-C-TC-----CATA--------------CA--A-----ACTGTAGTAGT
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                22345 21 +    109198 A----T-T-TT-----CATA--------------CA--A-----ACTGTAGTA--
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            I 1 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                      3581 23 -      4338 G----T-T-TC-----CATA--------------CA--A-----ACTGTAGTGAC
i Saiga_tatarica.SaiTat_scaffold_371890                 I 3 C 0
s Saimiri_boliviensis.NW_024100938.1                     15677777 20 -  43202129 A----T-C-TC-----CACA--------------CA--A-----ACT---GTAGT
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        9691 20 +     34089 A----T-C-TC-----CACA--------------CA--A-----ACT---GTAGT
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              9630 20 -     60842 A----T-C-TC-----CACA--------------CA--A-----ACT---GTAGT
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              9724 20 +     67014 A----T-C-TC-----CACA--------------CA--A-----ACT---GTAGT
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              9701 20 +     60816 A----T-C-TC-----CACA--------------CA--A-----ACT---GTAGT
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 9638 20 -     76454 A----T-C-TC-----CACA--------------CA--A-----ACT---GTAGT
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17346408 22 -  30362882 A----T-C-TC-----CACA--------------AA--A-----ACTGTAATAG-
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         25729 22 -     62485 A----T-C-TC-----CACA--------------AA--A-----ACTGTAATAG-
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   41632 19 -    114521 A----T-T-TT-----TAGAC--------------A--A-----ACTATA----T
i Scalopus_aquaticus.ScaAqu_scaffold_9300               I 5 C 0
s Semnopithecus_entellus.k141_1572367                        6570 23 +     15331 A----T-C-TC-----CATA--------------CA--A-----ACTGTAGTAGT
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      11945 23 +     20762 A----T-C-TC-----CATA--------------CA--A-----ACTGTAGTAGT
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         121949 23 +    130994 A----T-C-TC-----CATA--------------CA--A-----ACTGTAGTAGT
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           40729 23 +     46263 A----T-C-TC-----CATA--------------CA--A-----ACTGTAGTAGT
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     33874 23 +     42640 A----T-C-TC-----CATA--------------CA--A-----ACTGTAGTAGT
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        16896 23 +     30600 A----T-C-TC-----CATA--------------CA--A-----ACTGTAGTAGT
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  106930 23 -    120886 T----C-T-TA-----CATA--------------CA--C-----AGTGTAGTAGC
i Sigmodon_hispidus.SigHis_scaffold_11332               I 1 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            26269 22 +    739146 A----T-T-TC-----CATA---------------A--A-----ACTATAGTAAT
i Solenodon_paradoxus.SolPar_flattened_line_1012        I 1 C 0
s Sorex_araneus.JH798170.1                               17776602 20 -  27805282 A----T-T-TC-----TATAC--------------A--A--------ATCATAAT
i Sorex_araneus.JH798170.1                              I 1 C 0
s Spermophilus_dauricus.KZ294190.1                        2245283 23 +   2842873 a----t-t-tc-----caca--------------ta--a-----aCTGCAGtatc
i Spermophilus_dauricus.KZ294190.1                      I 2 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             241114 23 -    276980 A----T-T-TC-----CATA--------------CA--A-----ACTATAGTACT
i Spilogale_gracilis.SpiGra_flattened_line_905          I 1 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            35314 23 +     62062 A----T-T-TT-----CATA--------------CG--A-----ACTATAGTACT
i Suricata_suricatta.SurSur_flattened_line_20339        I 1 C 0
s Sus_scrofa.CM000824.4                                 189277309 17 + 218635234 a----t-t-tc-----cat---------------ca--a-----ACTGAA-----
i Sus_scrofa.CM000824.4                                 I 1 C 0
s Symphalangus_syndactylus.tarseq_24                        20074 23 -  13920577 A----T-C-TC-----CAAA--------------CA--A-----ACTGTAGTAGT
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                4307  9 +     20549 ----------------------------------------------TGTAGTAGT
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               18562 23 +     45698 A----T-T-TC-----AACA--------------CA--A-----ACTATAATAAA
i Tamandua_tetradactyla.TamTet_scaffold_26877           I 1 C 0
s Tapirus_indicus.TapInd_scaffold_176                      812901 23 +   1148477 A----T-T-TC-----CATA--------------CA--A-----ACTGTAGTACT
i Tapirus_indicus.TapInd_scaffold_176                   I 1 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  63543 23 +     99546 A----T-T-TC-----CATA--------------CA--A-----ACTGTAGTACT
i Tapirus_terrestris.TapTer_scaffold_14939              I 1 C 0
s Theropithecus_gelada.CM009951.1                       194013196 23 - 194193292 A----T-C-CC-----CATA--------------CA--A-----ACTGTAGTAGT
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                  1731 23 -      3104 C----T-T-TC-----AACA--------------CA--G-----ACTATAGTAGT
i Tolypeutes_matacus.TolMat_scaffold_475685             I 1 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  140050  9 -    259118 ----------------------------------------------TGGGGTAGT
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        30217 23 +     38948 A----T-C-TC-----CATA--------------CA--A-----ACTGTAGTAGT
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   23777 23 -     32910 A----T-C-TC-----CATA--------------CA--A-----ACTGTAGTAGT
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      5678 23 -     12939 A----T-C-TC-----CATA--------------CA--A-----ACTGTAGTAGT
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       5106 23 -     14244 A----T-C-TC-----CATA--------------CA--A-----ACTGTAGTAGT
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           46499 23 -     54611 A----T-C-TC-----CATA--------------CA--A-----ACTGTAGTAGT
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        4300 23 -     11566 A----T-C-TC-----CATA--------------CA--A-----ACTGTAGTAGT
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     6484 23 -     15592 A----T-C-TC-----CATA--------------CA--A-----ACTGTAGTAGT
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          5136 23 +     14371 A----T-C-TC-----CATA--------------CA--A-----ACTGTAGTAGT
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   3422 23 +     12481 A----T-C-TC-----CATA--------------CA--A-----ACTGTAGTAGT
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        3403 23 -     24393 A----T-C-TC-----CATA--------------CA--A-----ACTGTAGTAGT
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       8547 23 -     28054 A----T-C-TC-----CATA--------------CA--A-----ACTGTAGTAGT
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44663331 23 -  44834318 A----T-C-TC-----CATA--------------CA--A-----ACTGTAGTAGT
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       5643 23 +     13828 A----T-C-TC-----CATA--------------CA--A-----ACTGTAGTAGT
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                  11075 23 +     90398 A----T-T-TC-----TATA--------------TA--A-----ACTGTAATCAT
i Tragulus_javanicus.TraJav_scaffold_14717              I 2 C 0
s Trichechus_manatus.JH594618.1                          16091080 23 +  31416278 a----t-t-tc-----aacA--------------TA--A-----ACTGTAGTAGG
i Trichechus_manatus.JH594618.1                         I 1 C 0
s Tupaia_chinensis.KB320831.1                             2802331 28 -   3938065 t----t-t-tcacacacaca--------------aa--a-----aaagtagtaGT
i Tupaia_chinensis.KB320831.1                           I 1 C 0
s Tupaia_tana.TupTan_flattened_line_68454                   11156 16 +     13056 T----T-T-TCACACACACA--------------AA-------------------
i Tupaia_tana.TupTan_flattened_line_68454               I 1 I 11
s Tursiops_truncatus.MRVK01000923.1                      69319268 23 -  96451834 a----t-t-tc-----caaa--------------ca--a-----ACTGTAGCTGT
i Tursiops_truncatus.MRVK01000923.1                     I 1 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                    1999 23 +    136657 A----T-T-TC-----TAGAC--------------A--A-----GCTATATTCAT
i Uropsilus_gracilis.UroGra_scaffold_4115               I 5 C 0
s Ursus_maritimus.KK498671.1                              6522764 23 +  28682327 A----T-T-TC-----CATA--------------CG--A-----ACTGTAGAACT
i Ursus_maritimus.KK498671.1                            I 1 C 0
s Varecia_rubra.k141_432109                                 10666 23 -     20643 A----T-T-TC-----CACA--------------CA--A-----ACCATAGTGGT
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             30201 23 -     33872 A----T-T-TC-----CACA--------------CA--A-----ACCATAGTGGT
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1530295 23 -   2331223 A----T-T-TG-----CATA--------------CA--A-----ACTGCAGTCCT
i Vicugna_pacos.KN269600.1                              I 1 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                146435 23 -    281493 A----T-T-TC-----CATT--------------CA--A-----ACTGTTGTACT
i Vulpes_lagopus.VulLag_flattened_line_2045             I 6 C 0
s Xerus_inauris.XerIna_scaffold_7898                       132779 23 -    134049 A----T-T-TC-----CACG--------------CA--A-----ACTGCAGTAGC
i Xerus_inauris.XerIna_scaffold_7898                    I 2 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        221654 10 -    227762 ---------------------------------------------CTGTAGTACT
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_202118                     2382 23 -      3360 A----C-T-TT-----TACA--------------CA--G-----AATACGGTAGC
i Zapus_hudsonius.ZapHud_scaffold_202118                I 1 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            3861 23 -     13665 A----T-T-TC-----CATA--------------CA--A-----ACTGTAGTTGT
i Ziphius_cavirostris.ZipCav_flattened_line_60625       I 1 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Noctilio_leporinus.NocLep_scaffold_12062                  52704  0 +     94413 C
e Hylobates_pileatus_a.tarseq_592                             37267 2881 -     60944 I
e Tarsius_wallacei.k141_48636                               64696  0 +     65473 C
e Tarsius_lariang.k141_609102                               31387  0 +     42269 C
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Cephalopachus_bancanus.k141_702587                        12545  0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530  0 +    345090 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               18808  6 +    209709 GTTA--------------------TA
s Acinonyx_jubatus.LLWD01000356.1                         2041653  6 +   3721120 GTTG--------------------TT
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    119300  6 -    189883 ACTA--------------------TA
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10665521  6 +  23371972 GTTG--------------------tt
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7102469  6 -  16596857 GTTG--------------------tt
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_141108                   2646  6 -      7259 ACTG--------------------AG
i Allactaga_bullata.AllBul_scaffold_141108              C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   6696  6 -     60446 GTTA--------------------TA
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         7410  6 -     29318 GTTA--------------------TA
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         6348  6 +     38766 GTTA--------------------TA
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          7306  6 -     80423 GTTA--------------------TA
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              2254  6 +     19852 GTTA--------------------TA
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                4474  6 -     12443 GTTA--------------------TG
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                             1797  6 +      5070 GTTA--------------------TA
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                 1544  6 -      1641 GTTA--------------------TG
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          4283  6 -     24210 GTTA--------------------TG
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_494922                              787  6 -      8325 ATTA--------------------TG
i Alouatta_nigerrima.k141_494922                        C 0 C 0
s Alouatta_palliata.k141_405616                              6701  6 +     16794 GTTA--------------------TG
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_347198                              730  6 +      9111 GTTA--------------------TA
i Alouatta_puruensis.k141_347198                        C 0 C 0
s Alouatta_seniculus.k141_790278                             5978  6 -      9835 GTTA--------------------TA
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3528701  6 +   4113121 ATTG--------------------TA
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      394641  6 -    631301 GTTG--------------------TA
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             5929  6 +     55446 GTTG--------------------TA
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 67588  6 +     78111 GTTA--------------------TA
i Aotus_azarae.k141_3170768                             I 1 C 0
s Aotus_griseimembra.k141_3275623                           10529  6 +     22701 GTTA--------------------TA
i Aotus_griseimembra.k141_3275623                       I 1 C 0
s Aotus_nancymaae.KZ196176.1                              5754498  6 +   9889416 GTTA--------------------TA
i Aotus_nancymaae.KZ196176.1                            I 1 C 0
s Aotus_trivirgatus.k141_1740727                            11077  6 -    104377 GTTA--------------------TA
i Aotus_trivirgatus.k141_1740727                        I 1 C 0
s Aotus_vociferans.k141_718647                              11106  6 +     23246 GTTA--------------------TA
i Aotus_vociferans.k141_718647                          I 1 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     3724  6 +     11424 ACTG--------------------TA
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        7691  6 +      9265 GCTG--------------------TA
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                12938  6 -     29036 GTTG--------------------TA
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9544388  6 +  39197703 GTTA--------------------TA
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             65662  6 +     85812 GTTA--------------------TA
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                16672  6 +     89302 GTTA--------------------TA
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             21176  6 -     58268 GTTA--------------------TA
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             69170  6 +    119057 GTTA--------------------TA
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              11139  6 -     25888 GTTA--------------------TA
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                12216  6 -     16375 GTCA--------------------TA
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               5832  6 +      6337 GTCA--------------------TA
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26386111  6 +  51448160 GTTG--------------------TA
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                       11284  6 -     13118 GTTG--------------------TA
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   50693  6 -     72089 GTTG--------------------TA
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   305625  6 -   6870073 GTTG--------------------TA
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22959731  6 + 161108492 GCTG--------------------TA
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     421910  6 +    998990 GTTG--------------------TA
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22668383  6 + 158972876 GCTG--------------------TA
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               677247  6 +   1914593 GTTG--------------------TA
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               119008  6 -    171031 GTTA--------------------TA
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 18028  6 +    125063 GTTA--------------------TA
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                20075  6 -    216513 GTTA--------------------TA
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       12618  6 -    134917 GTTA--------------------TA
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3225210  6 -   8989139 GTTG--------------------TA
i Camelus_bactrianus.KN276303.1                         C 0 I 2
s Camelus_dromedarius.KN271192.1                           402910  6 -  15254737 GTTG--------------------TA
i Camelus_dromedarius.KN271192.1                        C 0 I 2
s Camelus_ferus.KB016973.1                                2978648  6 +   6889770 GTTG--------------------TA
i Camelus_ferus.KB016973.1                              C 0 I 2
s CanFam4.chr31                                          11528374  6 +  39901454 ATTG--------------------TT
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   23348  6 +     87036 ATTG--------------------TT
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11275271  6 -  35597290 ATTG--------------------TT
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11097768  6 +  39895921 ATTG--------------------TT
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16464553  6 -  44759192 ATTG--------------------TT
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21336134  6 + 157394656 ATTG--------------------TA
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135714487  6 - 157403528 ATTG--------------------TA
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_1011243                 1093  6 +      1208 GTCC--------------------CA
i Capromys_pilorides.CapPil_scaffold_1011243            C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               63930  6 +     67245 GTTG--------------------TA
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_1326                     1223  3 -    202837 G-----------------------TA
i Castor_canadensis.CasCan_scaffold_1326                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   164948  6 -    276539 GTTG--------------------CA
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15791462  6 -  24422027 TTCC--------------------AA
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15803407  6 -  24440124 TTCC--------------------AA
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       181579  6 +    436027 TTCC--------------------AA
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18896742  6 -  29618158 GTTA--------------------TA
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                13392  6 -     26817 GTTA--------------------TA
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                17636  6 +     25043 GTTA--------------------TA
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4370192  6 +   7569818 GTTA--------------------TG
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_171732          349  6 +      8380 GTTA--------------------TG
i Ceratotherium_simum_cottoni.CerCot_scaffold_171732    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6560636  6 +   6739814 GTTA--------------------TA
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      32113  6 +     60454 GTTA--------------------TA
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          7317  6 -     21101 GTTA--------------------TA
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         64627  6 -    107033 GTTA--------------------TA
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        7487  6 -     17608 GTTA--------------------TA
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          4655  6 +     45019 GTTA--------------------TA
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           4931  6 +     15177 GTTA--------------------TA
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          7537  6 +     16677 GTTA--------------------TA
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           29733  6 +     35983 GTTA--------------------TA
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11996258  6 +  12117833 GTTA--------------------TA
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46483240  6 +  46592721 GTTA--------------------TA
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                       1351  6 -     27215 GTTA--------------------TA
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       7551  6 +     35577 GTTA--------------------TA
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        7345  6 -     25661 GTTA--------------------TA
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        7517  6 -     17744 GTTA--------------------TA
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        26886  6 +     37128 GTTA--------------------TA
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           5904  6 -      6963 GCTG--------------------TA
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           64432  6 -     68416 GTTG--------------------TA
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_854352                             734  6 +     27737 GGTG--------------------TA
i Cheirogaleus_medius.k141_854352                       C 0 C 0
s Cheracebus_lucifer.k141_619653                            10699  6 -     18223 GTTA--------------------TA
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              2440  6 +    188999 GTTA--------------------TA
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           46739  6 +     57117 GTTA--------------------TA
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          51419  6 +     54541 GTTA--------------------TA
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15966149  6 +  43084221 GTCC--------------------aa
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         76220  6 +    196370 GTTA--------------------TA
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          20401  6 +     40510 GTTA--------------------TA
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15145071  6 -  15256731 GTTA--------------------TA
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      39535  6 -     53260 GTTA--------------------TA
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101150094  6 + 101219884 GTTA--------------------TA
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                19932  6 -     21363 GCTG--------------------TA
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           765236  6 +    964067 GCTG--------------------TA
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_304221              2858  6 -      7053 GTTC--------------------TA
i Chrysochloris_asiatica.ChrAsi_scaffold_304221         C 0 C 0
s Colobus_angolensis.KN985967.1                          10889865  6 +  10971483 GTTA--------------------TA
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147667793  6 + 156195979 GTTA--------------------TA
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            19776  6 +     23629 GTTA--------------------TA
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60624197  6 +  78930452 GTTG--------------------TA
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         4606  6 -      5782 GTTG--------------------TA
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 284204  6 -    399297 ACTG--------------------TA
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53036490  6 +  72327488 ACTG--------------------TA
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              4078  6 -     22648 ATTG--------------------TA
i Crocidura_indochinensis.CroInd_scaffold_27484         I 2 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            59589  6 -     70449 GTTG--------------------TT
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  216343  3 -    956709 GT-----------------------A
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 37866  6 -     67205 GATG--------------------CA
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                22695  6 +     26546 GTCC--------------------AA
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             63837  6 -    236241 GTCC--------------------AA
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          186953  6 -   6883506 GCTG--------------------TA
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16850379  6 +  31942871 GTTG--------------------TA
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80042703  6 -  96802777 GTTG--------------------TA
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18703148  6 -  18957592 GTTG--------------------TA
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 328591  6 +    993696 gtta--------------------tg
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   9225  6 +    151128 GTTA--------------------TG
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   161628 24 +    228994 GG--AAGCGCTTATGGAAAAAAGGAA
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3661492  5 +   4240102 -ACA--------------------TA
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  3866  5 -     11986 -ACA--------------------TA
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                42409  6 -     73477 GCCC--------------------AA
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           23005130  6 -  44670279 CCTA--------------------TA
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 15312  3 +     24177 ---G--------------------Tg
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1498698  6 +   1727528 ATTG--------------------TA
i Elaphurus_davidianus.JRFZ01086400.1                   I 49 C 0
s Elephantulus_edwardii.JH947210.1                        7836644  6 +  15467074 ATTT--------------------AA
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        245200  6 -    369425 ACTA--------------------TG
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01076532.1                           1552  6 +      9159 ACTA--------------------TA
i Ellobius_talpinus.LOJH01076532.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85879516  6 +  99434291 Gttg--------------------tt
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4710908  6 +   6522550 GTTG--------------------TA
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5858452  6 -   7175178 GTTG--------------------TG
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13356938  6 +  41866177 GTTG--------------------TG
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          18428  6 +     92910 GTTG--------------------TG
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11543933  6 +  16010500 gATG--------------------TA
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48782104  6 -  48907691 GTTA--------------------TA
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          320954  6 +    330699 GTTG--------------------TA
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             67406  6 +     89355 GTTG--------------------TA
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                             10496  6 +     13586 GTCG--------------------TA
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_1015201                              3755  6 -      4292 GTCG--------------------TA
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            16892  6 +     36558 GTCG--------------------TA
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            13214  6 +     60246 GTCG--------------------TA
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                16699  6 +    109717 GTCC--------------------TA
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 4682  6 -     19505 GTCG--------------------TA
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                21357  6 +     27497 GTCG--------------------TA
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           23813  6 +     26808 GTCG--------------------TA
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                38545  6 +     46535 GTCG--------------------TA
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              21286  6 -     29447 GTCG--------------------TA
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129901226  6 - 159252932 GTTG--------------------tt
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129288203  6 - 158578461 GTTG--------------------TT
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 29393  6 +     52776 GTTG--------------------TT
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13898124  6 -  19261668 GTCc--------------------aa
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     216547  6 -    847004 GTTG--------------------TA
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           18909  6 -     43889 GTTG--------------------TA
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          16050  6 +     27357 GTTG--------------------TA
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               160819  6 +    324696 GTTG--------------------TA
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    188423  6 -    189561 GTTG--------------------TA
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           17740  6 -     18683 GCTA--------------------TA
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                              10507  6 -     14630 ATTA--------------------TA
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119657607  6 - 195582420 ATTA--------------------TA
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   81042  6 +    118900 GCTA--------------------TA
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         7288  6 +     10286 GTCG--------------------TA
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             5769  6 -     11661 GTTG--------------------TA
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                            11093  6 +     56096 GTCG--------------------TA
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        34342  6 -     42470 GTCG--------------------TA
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        50968  6 -     54384 GTCG--------------------TA
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              24707  5 +     53719 GTT---------------------TT
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                35520  6 -     91191 ATTG--------------------TA
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2562409  6 +  31725842 GTCC--------------------Aa
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               64289  6 +     73687 GTCA--------------------TA
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 I 712
s Hippopotamus_amphibius.HipAmp_scaffold_1308              152777  6 +    277961 GTTG--------------------TA
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      286246  6 -    477199 GTTG--------------------TA
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959               3519  6 +     26078 GCTG--------------------TA
i Hipposideros_galeritus.HipGal_scaffold_52959          C 0 C 0
s Hoolock_leuconedys.ctg79                                     10432  6 -   7690867 GTTA--------------------TA
i Hoolock_leuconedys.ctg79                                 I 23 I 11
s Hyaena_hyaena.HyaHya_flattened_line_20729                 25142  6 -     67322 GTTG--------------------TT
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           23066  6 -    119109 GTCC--------------------AA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_1816750                             3002  6 +      3202 GTTA--------------------TA
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1136966                              1012  6 +      9785 GTTA--------------------TA
i Hylobates_agilis.k141_1136966                         C 0 C 0
s Hylobates_klossii.k141_468230                              4492  6 +      5464 GTTA--------------------TA
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14629838  6 -  25970782 GTTA--------------------TA
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            2389  6 +      4161 GTTA--------------------TA
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                    11335  6 +     22540 GTCT--------------------AA
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7131605  6 +  13083262 ATTg--------------------tt
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   2827  6 +      3484 GTCA--------------------TA
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              14930  6 +     17520 GTTG--------------------TA
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8580394  6 +  11848649 ATTG--------------------AG
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               29550  6 +     37189 GTTG--------------------TA
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          55260  6 -    147782 GTTA--------------------TA
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    7459  6 +     26176 GTTG--------------------TA
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258412646  6 - 285822530 GTCG--------------------TA
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        29970  6 +     39228 GTTG--------------------TA
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            59334  6 +     63517 GTTG--------------------TA
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        37718  6 -     38897 GTTG--------------------TA
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      3760  6 -     13103 GTTG--------------------TA
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3093773  6 -   3498232 ATTG--------------------TT
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    22246  6 +     22452 GTCA--------------------TA
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            141858  6 +   3060487 GTTG--------------------TA
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19253725  6 +  19376315 GTTA--------------------TA
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           16512  6 +     84689 GTTG--------------------TA
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3784245  6 +   6799190 GTTG--------------------TA
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20600029  6 -  62548349 GTTA--------------------ta
i Loxodonta_africana.GL010040.1                         C 0 I 526
s Lycaon_pictus.CM007556.1                               11097224  6 +  39895028 ATTG--------------------TT
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             25474  6 +     74745 GTTA--------------------TA
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12711937  6 +  12821369 GTTA--------------------TA
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                4510  6 -     26467 GTTA--------------------TA
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           52381  6 +     63263 GTTA--------------------TA
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 4491  6 -     26361 GTTA--------------------TA
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_2667654                                 794  6 -      5626 GTTA--------------------TA
i Macaca_leonina.k141_2667654                           C 0 C 0
s Macaca_maura.k141_251854                                  50910  6 -     79256 GTTA--------------------TA
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196041008  6 + 196197964 GTTA--------------------ta
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11451178  6 +  11645122 GTTA--------------------TA
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   9864  6 -     46448 GTTA--------------------TA
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                7525  6 -     13212 GTTA--------------------TA
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 21207  6 -     55006 GTTA--------------------TA
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43846629  6 +  43892939 GTTA--------------------TA
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               22491  6 -     24607 GTTA--------------------TA
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               9861  6 -     27140 GTTA--------------------TA
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                703928  3 +    802869 ---G--------------------TA
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43442894  6 -  43563597 GTTA--------------------TA
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4455693  6 -   4543643 GTTA--------------------TA
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            154208  6 +    252755 GCTA--------------------TA
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             41806  6 +     58827 GCTA--------------------TA
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36879471  6 +  64221397 ATTg--------------------tt
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       67727  6 -    234502 GTTG--------------------CA
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             8611  6 -     87323 GTTG--------------------TT
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 3425  6 +    115071 ACTA--------------------TA
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1053064  6 -  26018355 ACTG--------------------TA
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    4521  6 -     12939 GTTG--------------------TA
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16515687  6 +  47401472 GTTG--------------------TA
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  46744  6 -     48017 TCTA--------------------TA
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               26885  6 -     32043 GTTG--------------------TA
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22826036  6 -  98408828 ACTA--------------------TA
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8215235  6 +  10048721 GTTg--------------------ta
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            39694  6 +     45743 CTTG--------------------TA
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         7443  6 +     29742 GTTA--------------------TA
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        19172  6 -    104932 ATTG--------------------TT
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     6382  6 -     12809 ATTG--------------------TA
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 152296  6 +    154973 GTTG--------------------TA
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                165395  6 +    265003 GTTG--------------------TA
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  9096  6 -     19904 GTTG--------------------TA
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  152436  5 -    168139 GTT---------------------TT
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          26227  6 -    100666 ATTG--------------------TA
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70773306  6 +  92629107 GCTA--------------------TA
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75495370  6 +  98207768 GCTA--------------------TA
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67562097  6 +  89017189 ACTA--------------------TA
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74338078  6 +  97876770 GCTA--------------------TA
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             16107  6 +     98495 GTTG--------------------TA
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4430714  6 -  28371801 GTTG--------------------TT
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     97795  6 -    117718 GTCC--------------------CA
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               973241  6 +   8389877 GTTG--------------------TA
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5024317  6 +   6462685 GTTG--------------------TA
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3470738  6 -   3747815 GTTG--------------------TA
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        15975  6 +     66751 GTTG--------------------TA
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_12795               352  6 -     87886 GCCG--------------------TA
i Myrmecophaga_tridactyla.MyrTri_scaffold_12795         C 0 C 0
s Nannospalax_galili.KL201303.1                            125781  6 +    362372 ATTG--------------------TA
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                              11704  6 +     48152 GTTA--------------------TA
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4492567  6 -  14209539 ATTG--------------------TT
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3956887  6 -   4490290 GTTG--------------------TA
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  52704  5 +     94413 -TTG--------------------TA
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_762468                            1509  6 -      2755 GCTA--------------------TA
i Nomascus_annamensis.k141_762468                       C 0 C 0
s Nomascus_concolor.k141_256540                              8119  6 -      8966 GCTA--------------------TA
i Nomascus_concolor.k141_256540                         C 0 C 0
s Nomascus_gabriellae.k141_1400361                           2060  6 -      2203 GCTA--------------------TA
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_2374                            4579  6 +      8673 gtta--------------------ta
i Nomascus_siki_b.tarseq_2374                       C 0 I 614
s Nomascus_siki_a.k141_421408                                  1974  6 +     16235 GCTG--------------------TA
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                40099  6 +   3668941 ATTG--------------------TT
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65573287  6 -  95554990 GTTG--------------------TA
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_6040852                             923  6 +      1868 GTTG--------------------TA
i Nycticebus_coucang.k141_6040852                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65681466  6 +  89412551 GGTG--------------------TA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            5001304  6 -  23139505 GTTg--------------------ta
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3692937  6 +  10294119 GGCC--------------------CA
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             686803  6 -   3126709 ATTG--------------------TT
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1086084  6 +   1425656 ATTG--------------------TA
i Odocoileus_virginianus.KZ101650.1                     I 4 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         44153  6 +     78940 GTTG--------------------TA
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  131842  6 +    145789 ACTA--------------------CA
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  44776  6 +     62360 ACTA--------------------TA
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7230561  6 -   7562323 GTTG--------------------TA
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_371885              1770  6 +      3658 TTTA--------------------TA
i Orycteropus_afer.OryAfe_flattened_line_371885         C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141885262  6 + 163896628 GTTG--------------------TA
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      317231  6 -    505867 ATTG--------------------TT
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        6408  6 -     53940 GTTG--------------------TA
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18014374  6 -  38779656 GTTG--------------------TA
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134085302  6 - 275406953 ATTG--------------------TA
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      86548  6 +    140051 ATTG--------------------TA
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127579786  6 - 205426864 GTTA--------------------TA
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120156946  6 - 196562556 GTTA--------------------TA
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  41993  6 +    295523 GTTG--------------------TT
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3645807  6 +  18214204 GTTG--------------------tt
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5035444  6 -   6340057 GTTG--------------------tt
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1074187  6 -   1292953 ATTG--------------------TA
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188161686  6 - 188283584 GTTA--------------------CA
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              4776  6 +     25005 GTTA--------------------CA
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47519058  6 +  47705337 GTTA--------------------CA
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 73049  6 -    104429 GTTA--------------------CA
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   11581  6 +     14967 GTTA--------------------CA
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 7446  6 -      7628 GTTA--------------------CA
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    123460  6 -    135482 GTTG--------------------TT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          12072  6 -     23713 GTTG--------------------TA
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           13223  6 +     61070 GTTG--------------------TA
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       3488  6 +     49596 GACA--------------------TA
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615458.1                       2840589  6 -   3366660 ACTA--------------------TA
i Peromyscus_maniculatus.KI615458.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    19202  6 -     36578 GTCC--------------------AA
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              5024  6 +      8220 GTTG--------------------TA
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Piliocolobus_badius.k141_1987485                           5244  6 -      5908 GTTA--------------------TA
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       5863  6 -     17985 GTTA--------------------TA
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            5230  6 +      7694 GTTA--------------------TA
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26743713  6 +  26888534 GTTA--------------------TA
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306           101471  6 +    112873 GTTG--------------------TG
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990          11520  6 +     21690 ATTG--------------------TA
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       27351  6 +     44506 GTTA--------------------TA
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        27564  6 +     67491 GTTA--------------------TA
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      17803  6 -     98129 GTTA--------------------TA
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     27404  6 +    147771 GTTA--------------------TA
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         4039  6 -     43940 GTTA--------------------TA
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          8122  6 -     55515 GTTA--------------------TA
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         27476  6 +    152463 GTTA--------------------TA
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       5283  6 -    119457 GTTA--------------------TA
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         17198  6 +    134592 GTTA--------------------TA
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          27786  6 -     75465 GTTA--------------------TA
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              192417  6 -    373494 GTTA--------------------TA
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19813066  6 +  19899266 GTTA--------------------TA
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               8986  6 -     15069 GTTA--------------------TA
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              9101  6 +     14865 GTTT--------------------TA
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                5393  6 -      9567 GTCA--------------------TA
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 I 715
s Prolemur_simus.MPIZ01000048.1                           6854022  6 +  12164890 GTCG--------------------TA
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     22823  6 -     30946 GTCA--------------------TA
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         9124  6 +     11805 GTCA--------------------TA
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           48458  6 +     52369 GTCA--------------------TA
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         40845  6 -     44753 GTCA--------------------TA
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            22768  6 +     27322 GTCA--------------------TA
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       22414  6 -     53241 GTCA--------------------TA
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         44677  6 -     48185 GTCA--------------------TA
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           40401  6 +     77221 ACTa--------------------ta
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            8051  6 -     27784 GTTG--------------------Cc
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        252360  6 -    344369 GTTG--------------------TT
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13249023  3 -  17261082 ---G--------------------Ta
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             606973  3 -   3946241 ---G--------------------TA
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131542138  6 - 161321710 GTTG--------------------tt
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             33092  6 +     56732 GTTA--------------------TA
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6809589  6 +   6970761 GTTA--------------------TA
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             8978  6 +     18040 GTTA--------------------TA
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                22932  6 +     68503 ATTG--------------------TA
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 4 C 0
s Rattus_norvegicus.chr11                                13920792  6 +  90463843 ACCG--------------------TA
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1794852  6 +   2252614 GTTG--------------------TA
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                            3357  6 -     17045 GTTA--------------------TA
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206380844  6 - 206558726 GTTA--------------------TA
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44859747  6 -  45163003 GTTA--------------------TA
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                22366  3 +    109198 ---G--------------------TA
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                      3604  6 -      4338 ATTG--------------------TA
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15677797  6 -  43202129 GTTA--------------------TA
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        9711  6 +     34089 GTTA--------------------TA
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              9650  6 -     60842 GTTA--------------------TA
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              9744  6 +     67014 GTTA--------------------TA
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              9721  6 +     60816 GTTA--------------------TA
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 9658  6 -     76454 GTTA--------------------TA
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17346430  6 -  30362882 GTTA--------------------TA
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         25751  6 -     62485 GTTA--------------------TA
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   41651  6 -    114521 GTTG--------------------TA
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        6593  6 +     15331 GTTA--------------------TA
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      11968  6 +     20762 GTTA--------------------TA
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         121972  6 +    130994 GTTA--------------------TA
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           40752  6 +     46263 GTTA--------------------TA
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     33897  6 +     42640 GTTA--------------------TA
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        16919  6 +     30600 GTTA--------------------TA
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  106953  6 -    120886 AGTA--------------------CA
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            26291  6 +    739146 GTTG--------------------TG
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17776622  6 -  27805282 AATG--------------------tg
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2245306  6 +   2842873 attg--------------------tt
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             241137  6 -    276980 GTTG--------------------TT
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            35337  5 +     62062 GTT---------------------TT
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189277326  6 + 218635234 GTTG--------------------CA
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        20097  6 -  13920577 GTTA--------------------TA
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                4316  6 +     20549 GTTG--------------------TA
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               18585  6 +     45698 GCCG--------------------TA
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      812924  6 +   1148477 GTTA--------------------TG
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  63566  6 +     99546 GTTA--------------------TG
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194013219  6 - 194193292 GTTA--------------------TA
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                  1754  6 -      3104 GCTG--------------------TA
i Tolypeutes_matacus.TolMat_scaffold_475685             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  140059  6 -    259118 GTTG--------------------TG
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        30240  6 +     38948 GTTA--------------------TA
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   23800  6 -     32910 GTTA--------------------TA
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      5701  6 -     12939 GTTA--------------------TA
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       5129  6 -     14244 GTTA--------------------TA
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           46522  6 -     54611 GTTA--------------------TA
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        4323  6 -     11566 GTTA--------------------TA
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     6507  6 -     15592 GTTA--------------------TA
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          5159  6 +     14371 GTTA--------------------TA
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   3445  6 +     12481 GTTA--------------------TA
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        3426  6 -     24393 GTTA--------------------TA
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       8570  6 -     28054 GTTA--------------------TA
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44663354  6 -  44834318 GTTA--------------------TA
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       5666  6 +     13828 GTTA--------------------TA
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                  11098  6 +     90398 GTTG--------------------TA
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16091103  6 +  31416278 ATTa--------------------ta
i Trichechus_manatus.JH594618.1                         C 0 I 528
s Tupaia_chinensis.KB320831.1                             2802359  6 -   3938065 ATTG--------------------CA
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                   11183  6 +     13056 ACTG--------------------CA
i Tupaia_tana.TupTan_flattened_line_68454               I 11 C 0
s Tursiops_truncatus.MRVK01000923.1                      69319291  6 -  96451834 GTTG--------------------TA
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                    2022  6 +    136657 ATTA--------------------CA
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 C 0
s Ursus_maritimus.KK498671.1                              6522787  6 +  28682327 GTTG--------------------tt
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                 10689  6 -     20643 GTCG--------------------TA
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             30224  6 -     33872 GTCG--------------------TA
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1530318  6 -   2331223 GTTG--------------------TA
i Vicugna_pacos.KN269600.1                              C 0 I 2
s Vulpes_lagopus.VulLag_flattened_line_2045                146458  6 -    281493 ATTG--------------------TT
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       132802  6 -    134049 ATTG--------------------TA
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        221664  6 -    227762 ATTG--------------------TT
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_202118                     2405  6 -      3360 ATTG--------------------TG
i Zapus_hudsonius.ZapHud_scaffold_202118                C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            3884  6 -     13665 GTTG--------------------CA
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Hylobates_pileatus_a.tarseq_592                             37267 2881 -     60944 I
e Tarsius_wallacei.k141_48636                               64696  0 +     65473 C
e Tarsius_lariang.k141_609102                               31387  0 +     42269 C
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Cephalopachus_bancanus.k141_702587                        12545  0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530  0 +    345090 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               18814 11 +    209709 CAA--------T---G-GT---T-A-AG
s Acinonyx_jubatus.LLWD01000356.1                         2041659 11 +   3721120 ctg--------t---a-at---t-a-aa
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    119306 11 -    189883 CTA--------A---A-AT---T-A-AA
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10665527 11 +  23371972 caa--------t---g-at---t-a-aa
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7102475 11 -  16596857 ttg--------t---g-at---t-a-aa
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_141108                   2652 11 -      7259 GTA--------C---A-AT---T-G-AA
i Allactaga_bullata.AllBul_scaffold_141108              C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   6702 11 -     60446 CAA--------T---G-GT---T-A-AA
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         7416 11 -     29318 CAA--------T---G-GT---T-A-AA
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         6354 11 +     38766 CAA--------T---G-GT---T-A-AA
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          7312 11 -     80423 CAA--------T---G-GT---T-A-AA
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              2260 11 +     19852 CAA--------T---G-GT---T-A-AA
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                4480 11 -     12443 CAA--------T---G-GT---T-A-AA
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                             1803 11 +      5070 CAA--------T---G-GT---T-A-AA
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                 1550 11 -      1641 CAA--------T---G-GT---T-A-AA
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          4289 11 -     24210 CAA--------T---G-GT---T-A-AA
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_494922                              793 11 -      8325 CAA--------T---G-GT---T-A-AA
i Alouatta_nigerrima.k141_494922                        C 0 C 0
s Alouatta_palliata.k141_405616                              6707 11 +     16794 CAA--------T---G-GT---T-A-AA
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_347198                              736 11 +      9111 CAA--------T---G-GT---T-A-AA
i Alouatta_puruensis.k141_347198                        C 0 C 0
s Alouatta_seniculus.k141_790278                             5984 11 -      9835 CAA--------T---G-GT---T-A-AA
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3528707 11 +   4113121 CTA--------T---G-AT---T-A-AA
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      394647 11 -    631301 CTA--------T---G-AT---T-A-AA
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             5935 11 +     55446 CTA--------T---G-AT---T-A-AA
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 67594 11 +     78111 CAA--------T---G-GT---T-A-AA
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                           10535 11 +     22701 CAA--------T---G-GT---T-A-AA
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5754504 11 +   9889416 CAA--------T---g-gt---t-a-aa
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                            11083 11 -    104377 CAA--------T---G-GT---T-A-AA
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                              11112 11 +     23246 CAA--------T---G-GT---T-A-AA
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     3730 11 +     11424 CTA--------T---G-AT---T-A-AA
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 I 1
s Arctocebus_calabarensis.k141_587554                        7697 11 +      9265 CTA--------T---G-AT---T-A-AA
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                12944 11 -     29036 CTA--------T---G-AT---T-A-AA
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9544394 11 +  39197703 CAA--------T---G-GT---T-A-AA
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             65668 11 +     85812 CAA--------T---G-GT---T-A-AA
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                16678 11 +     89302 CAA--------T---G-GT---T-A-AA
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             21182 11 -     58268 CAA--------C---G-GT---T-A-AA
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             69176 11 +    119057 CAA--------T---G-GT---T-A-AA
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              11145 11 -     25888 CAA--------T---G-GT---T-A-AA
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                12222 11 -     16375 CTA--------T---G-AT---T-A-AA
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               5838 11 +      6337 CTA--------T---G-AT---T-A-AA
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26386117 11 +  51448160 CTA--------T---G-AT---T-A-AA
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                       11290 11 -     13118 CTA--------T---G-AT---T-A-AA
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   50699 11 -     72089 CTA--------T---G-AT---T-A-AG
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 I 211
s Bison_bison.KN264915.1                                   305631 11 -   6870073 CTa--------t---g-at---t-a-aa
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22959737 11 + 161108492 CTa--------t---g-at---t-a-aa
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     421916 11 +    998990 Cta--------t---g-at---t-a-aa
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22668389 11 + 158972876 CTa--------t---g-at---t-a-aa
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               677253 11 +   1914593 Cta--------t---g-at---t-a-aa
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               119014 11 -    171031 CAA--------C---G-GT---T-A-AA
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 18034 11 +    125063 CAA--------T---G-GT---T-A-AA
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                20081 11 -    216513 CAA--------C---G-GT---T-A-AA
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       12624 11 -    134917 CAA--------C---G-GT---T-A-AA
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3225218  7 -   8989139 ---------------G-AT---T-G-AA
i Camelus_bactrianus.KN276303.1                         I 2 C 0
s Camelus_dromedarius.KN271192.1                           402918  7 -  15254737 ---------------G-AT---T-G-AA
i Camelus_dromedarius.KN271192.1                        I 2 C 0
s Camelus_ferus.KB016973.1                                2978656  7 +   6889770 ---------------G-AT---T-G-AA
i Camelus_ferus.KB016973.1                              I 2 C 0
s CanFam4.chr31                                          11528380 11 +  39901454 CTA--------T---G-AT---T-A-AA
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   23354 11 +     87036 CTA--------T---G-AT---T-A-AA
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11275277 11 -  35597290 Cta--------t---g-at---t-a-aa
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11097774 11 +  39895921 Cta--------t---g-at---t-a-aa
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16464559 11 -  44759192 Cta--------t---g-at---t-a-aa
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21336140 11 + 157394656 CTA--------T---G-AT---T-A-AA
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135714493 11 - 157403528 CTA--------T---G-AT---T-A-AA
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_1011243                 1099 11 +      1208 CTA--------C---A-GT---T-A-AA
i Capromys_pilorides.CapPil_scaffold_1011243            C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               63936 11 +     67245 CTA--------T---G-AT---T-A-AA
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_1326                     1226 11 -    202837 TCA--------C---A-AT---G-G-AT
i Castor_canadensis.CasCan_scaffold_1326                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   164954 11 -    276539 CTA--------T---G-AT---T-A-AA
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15791468 11 -  24422027 CTA--------C---A-AT---T-T-AA
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15803413 11 -  24440124 CTA--------C---A-AT---T-T-AA
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       181585 11 +    436027 CTA--------C---A-AT---T-T-AA
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18896748 11 -  29618158 CAA--------T---G-GT---T-A-AA
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                13398 11 -     26817 CAA--------T---G-GT---T-A-AA
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                17642 10 +     25043 CAA--------T---G-GT---T-A--A
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4370198 11 +   7569818 ctg--------t---g-at---t-a-aa
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_171732          355 11 +      8380 CTG--------T---G-AT---T-A-AA
i Ceratotherium_simum_cottoni.CerCot_scaffold_171732    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6560642 11 +   6739814 CAA--------T---G-gt---t-a-aa
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      32119 11 +     60454 CAA--------T---G-AT---T-A-AA
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          7323 11 -     21101 CAA--------T---G-GT---T-A-AA
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         64633 11 -    107033 CAA--------T---G-GT---T-A-AA
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        7493 11 -     17608 CAA--------T---G-GT---T-A-AA
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          4661 11 +     45019 CAA--------T---G-GT---T-A-AA
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           4937 11 +     15177 CAA--------T---G-GT---T-A-AA
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          7543 11 +     16677 CAA--------T---G-GT---T-A-AA
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           29739 11 +     35983 CAA--------T---G-GT---T-A-AA
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11996264 11 +  12117833 CAA--------T---G-GT---T-A-AA
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46483246 11 +  46592721 CAA--------T---G-GT---T-A-AA
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                       1357 11 -     27215 CAA--------T---G-GT---T-A-AA
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       7557 11 +     35577 CAA--------T---G-GT---T-A-AA
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        7351 11 -     25661 CAA--------T---G-GT---T-A-AA
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        7523 11 -     17744 CAA--------T---G-GT---T-A-AA
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        26892 11 +     37128 CAA--------T---G-GT---T-A-AA
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           5910 11 -      6963 CTA--------T---G-AT---T-A-AA
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           64438 11 -     68416 CTA--------T---G-AT---T-A-AA
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_854352                             740 11 +     27737 CTA--------T---G-AT---T-A-AA
i Cheirogaleus_medius.k141_854352                       C 0 C 0
s Cheracebus_lucifer.k141_619653                            10705 11 -     18223 CAA--------T---G-GT---T-A-AA
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              2446 11 +    188999 CAA--------T---G-GT---T-A-AA
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           46745 11 +     57117 CAA--------T---G-GT---T-A-AA
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          51425 11 +     54541 CAA--------T---G-GT---T-A-AA
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15966155 12 +  43084221 cta--------c---a-at--tt-a-aa
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         76226 11 +    196370 CAA--------T---G-GT---T-A-AA
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          20407 11 +     40510 CAA--------T---G-GT---T-A-AA
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15145077 11 -  15256731 CAA--------T---G-GT---T-A-AA
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      39541 11 -     53260 CAA--------T---G-GT---T-A-AA
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101150100 11 + 101219884 CAA--------C---G-GT---T-A-AA
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                19938 11 -     21363 CTA--------T---G-AT---T-T-AA
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           765242 11 +    964067 CTA--------T---G-AT---T-T-AA
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_304221              2864 11 -      7053 CTA--------C---A-AT---T-A-AA
i Chrysochloris_asiatica.ChrAsi_scaffold_304221         C 0 C 0
s Colobus_angolensis.KN985967.1                          10889871 11 +  10971483 CAA--------T---G-gt---t-a-aa
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147667799 11 + 156195979 CAA--------T---G-GT---T-A-AA
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            19782 11 +     23629 CAA--------T---G-GT---T-A-AA
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60624203 11 +  78930452 CTA--------C---A-AT---T-A-GA
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         4612 11 -      5782 CTA--------T---G-AT---T-A-AA
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 284210 11 -    399297 CTA--------C---A-AT---T-A-AA
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53036496 11 +  72327488 gta--------c---a-at---g-a-aa
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              4084 11 -     22648 CTA--------T---A--T---T-TAAG
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            59595 11 -     70449 CTA--------T---G-AC---T-A-AA
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  216346 11 -    956709 ATA--------C---A-AT---T-A-AA
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 37872 11 -     67205 CAA--------C---A-AT---T-A-AA
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                22701 11 +     26546 CTA--------C---A-GT---T-A-AA
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             63843 11 -    236241 CTA--------C---A-AT---T-A-AA
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          186959 11 -   6883506 CTA--------C---G-AT---T-A-AA
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16850385 11 +  31942871 CTA--------T---G-AT---T-A-AA
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80042709 11 -  96802777 CTA--------T---G-AT---T-A-AA
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18703154 11 -  18957592 Cta--------t---g-at---t-a-aa
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 328597 11 +    993696 ctg--------t---g-at---t-a-aa
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   9231 11 +    151128 CTG--------T---G-AT---T-A-AA
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   161652 14 +    228994 GCA--------C---A-TGTGGA-A-AA
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3661497 11 +   4240102 CTA--------T---A-TT---C-A-AA
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  3871 11 -     11986 CTA--------T---A-TT---C-A-AA
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                42415 11 -     73477 CTA--------C---A-AT---T-A-AA
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           23005136 11 -  44670279 CTA--------T---T-CT---T-G-AA
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 15315 11 +     24177 tta--------t---g-at---t-a-aa
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1498704 11 +   1727528 CTA--------T---G-AT---T-A-AA
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7836650 11 +  15467074 CTA--------T---T-AT---T-A-AA
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        245206  7 -    369425 CTA--------C---T-AT---------
i Ellobius_lutescens.LOEQ01003611.1                     C 0 I 3
s Ellobius_talpinus.LOJH01076532.1                           1558  7 +      9159 CTA--------C---T-AT---------
i Ellobius_talpinus.LOJH01076532.1                      C 0 I 3
s Enhydra_lutris.KZ291749.1                              85879522 19 +  99434291 ctaaaaaagaaa---g-at---t-a-aa
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4710914 11 +   6522550 CCA--------T---G-AT---T-A-CA
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5858458 11 -   7175178 cca--------t---g-at---t-a-aa
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13356944 11 +  41866177 Cca--------t---g-at---t-a-aa
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          18434 11 +     92910 Cca--------t---g-at---t-a-aa
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11543939  9 +  16010500 CAA--------T---G-AT---T-A---
i Erinaceus_europaeus.JH835290.1                        C 0 I 2
s Erythrocebus_patas.Contig8                             48782110 11 -  48907691 CAA--------T---G-GT---T-A-AA
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          320960 11 +    330699 CTA--------T---G-AT---T-A-AA
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             67412 11 +     89355 CTA--------T---G-AT---T-A-AA
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                             10502 11 +     13586 CTA--------T---G-AT---T-A-AA
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_1015201                              3761 11 -      4292 CTA--------T---G-AT---T-A-AA
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            16898 11 +     36558 CTA--------T---G-AT---T-A-AA
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            13220 11 +     60246 CTA--------T---G-AT---T-A-AA
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                16705 11 +    109717 CTA--------T---G-AT---T-A-AA
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 4688 11 -     19505 CTA--------T---G-AT---T-A-AA
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                21363 11 +     27497 CTA--------T---G-AT---T-A-AA
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           23819 11 +     26808 CTA--------T---G-AT---T-A-AA
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                38551 11 +     46535 CTA--------T---G-AT---T-A-AA
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              21292 11 -     29447 CTA--------T---G-AT---T-A-AA
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129901232 11 - 159252932 ctg--------t---a-at---t-a-aa
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129288209 11 - 158578461 ctg--------t---a-at---t-a-aa
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 29399 11 +     52776 CTG--------T---A-AT---T-A-AA
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13898130 11 -  19261668 cta--------t---a-aa---t-a-aa
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     216553 11 -    847004 CTA--------T---G-AT---T-A-AA
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           18915 11 -     43889 CTA--------T---G-AT---T-A-AA
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          16056 11 +     27357 CTA--------T---G-AT---T-A-AA
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               160825 11 +    324696 CTA--------C---A-AT---T-A-AA
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    188429 11 -    189561 CTA--------T---G-AT---T-A-AA
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           17746 11 -     18683 CTA--------C---A-AT---T-A-AC
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                              10513 11 -     14630 CAG--------T---G-GT---T-A-AG
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119657613 11 - 195582420 CAA--------t---g-gt---t-a-ag
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   81048 11 +    118900 CTA--------C---A-AT---G-A-AA
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         7294 11 +     10286 CTA--------T---G-AT---T-A-AA
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             5775 11 -     11661 CTA--------T---G-AT---T-A-AA
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                            11099 11 +     56096 CTA--------T---G-AT---T-A-AA
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        34348 11 -     42470 CTA--------T---G-AT---T-A-AA
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        50974 11 -     54384 CTA--------T---G-AT---T-A-AA
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              24712 11 +     53719 CTA--------T---G-AC---T-A-AA
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                35526 11 -     91191 CTA--------T---G-AT---T-A-AA
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2562415 11 +  31725842 cta--------c---a-aa---t-a-aa
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               65007 11 +     73687 CTA--------T---G-AT---T-T-TA
i Heterohyrax_brucei.HetBruBak_scaffold_25354           I 712 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              152783 11 +    277961 TTA--------T---G-AT---T-A-AA
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      286252 11 -    477199 cta--------t---g-at---t-a-aa
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959               3525 11 +     26078 CTA--------T---G-AT---T-A-AA
i Hipposideros_galeritus.HipGal_scaffold_52959          C 0 C 0
s Hoolock_leuconedys.ctg315                                   351529 12 +    431944 CAG--------T---G-GT---T-AAAA
i Hoolock_leuconedys.ctg315                                I 6 I 394
s Hyaena_hyaena.HyaHya_flattened_line_20729                 25148 11 -     67322 CTC--------T---G-GC---T-A-TA
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           23072 11 -    119109 CTA--------C---A-AT---T-A-AA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_1816750                             3008 11 +      3202 CAG--------T---G-GT---T-A-AA
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1136966                              1018 11 +      9785 CAG--------T---G-GT---T-A-AA
i Hylobates_agilis.k141_1136966                         C 0 C 0
s Hylobates_klossii.k141_468230                              4498 11 +      5464 CAG--------T---G-GT---T-A-AA
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14629844 11 -  25970782 CAG--------T---G-GT---T-A-AA
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            2395 11 +      4161 CAG--------T---G-GT---T-A-AA
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                    11341 11 +     22540 CTA--------C---A-AT---T-A-AA
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7131611 11 +  13083262 cta--------c---a-at---t-a-aa
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   2833 11 +      3484 CTA--------T---G-AT---T-A-AA
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              14936 11 +     17520 CTA--------T---G-AT---T-A-AA
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8580400 14 +  11848649 GTA--------CAACA-AT---T-A-AC
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               29556 11 +     37189 CTA--------T---G-AT---T-A-AA
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          55266 11 -    147782 CAA--------T---G-GT---T-A-AA
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    7465 11 +     26176 CCA--------T---G-AT---T-A-CA
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258412652 11 - 285822530 CTA--------T---G-AT---T-A-AA
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        29976 11 +     39228 CTA--------T---G-AT---T-T-AA
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            59340 11 +     63517 CTA--------T---G-AT---T-T-AA
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        37724 11 -     38897 CTA--------T---G-AT---T-T-AA
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      3766 11 -     13103 CTA--------T---G-AT---T-T-AA
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3093779 11 -   3498232 CTA--------T---G-AT---T-A-AG
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    22252 11 +     22452 TCC--------T---A-AT---T-A-AA
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            141864 11 +   3060487 CTA--------T---G-AT---T-A-AA
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19253731 11 +  19376315 CAA--------T---G-GT---T-A-AA
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           16518 11 +     84689 CTA--------T---G-AT---T-A-AA
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3784251 11 +   6799190 CTA--------T---G-AT---T-A-AA
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20600561 11 -  62548349 cta--------t---g-at---t-a-aa
i Loxodonta_africana.GL010040.1                         I 526 C 0
s Lycaon_pictus.CM007556.1                               11097230 11 +  39895028 Cta--------t---g-at---t-a-aa
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             25480 11 +     74745 CAA--------T---G-GT---T-A-AA
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12711943 11 +  12821369 CAA--------T---G-GT---T-A-AA
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                4516 11 -     26467 CAA--------T---G-AT---T-A-AA
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           52387 11 +     63263 CAA--------T---G-GT---T-A-AA
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 4497 11 -     26361 CAA--------T---G-AT---T-A-AA
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_2667654                                 800 11 -      5626 CAA--------T---G-GT---T-A-AA
i Macaca_leonina.k141_2667654                           C 0 C 0
s Macaca_maura.k141_251854                                  50916 11 -     79256 CAA--------T---G-GT---T-A-AA
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196041014 11 + 196197964 caa--------t---g-at---t-a-aa
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11451184 11 +  11645122 CAA--------T---G-gt---t-a-aa
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   9870 11 -     46448 CAA--------T---G-GT---T-A-AA
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                7531 11 -     13212 CAA--------T---G-GT---T-A-AA
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 21213 11 -     55006 CAA--------T---G-GT---T-A-AA
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43846635 11 +  43892939 CAA--------T---G-GT---T-A-AA
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               22497 11 -     24607 CAA--------T---G-GT---T-A-AA
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               9867 11 -     27140 CAA--------T---G-GT---T-A-AA
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                703931 11 +    802869 CTA--------T---G-AT---T-A-AA
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43442900 11 -  43563597 CAA--------T---G-GT---T-A-AA
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4455699 11 -   4543643 CAA--------T---G-GT---T-A-AA
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            154214 11 +    252755 CTA--------T---G-AT---T-A-AA
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             41812 11 +     58827 CTA--------T---G-AT---T-A-AA
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36879477 11 +  64221397 cta--------c---a-at---t-a-aa
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       67733 11 -    234502 CTA--------T---G-CT---T-A-AA
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             8617 19 -     87323 CTAAAAAAGAAA---G-AT---T-A-AA
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 3431 12 +    115071 CTA--------A---ATAT---T-A-AA
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1053070 11 -  26018355 CTA--------C---A-AT---G-G-AA
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    4527 11 -     12939 CTA--------T---G-AT---T-A-AA
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16515693 11 +  47401472 Cta--------t---g-at---t-a-aa
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  46750 11 -     48017 TTA--------T---A-AT---T-G-GA
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               26891 11 -     32043 CTA--------T---G-AT---T-A-AA
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22826042  7 -  98408828 CTA--------C---T-AT---------
i Microtus_ochrogaster.CM001673.1                       C 0 I 3
s Miniopterus_natalensis.LDJU01000022.1                   8215241 12 +  10048721 tca--------t---g-at--tt-t-ta
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            39700 12 +     45743 TCA--------T---G-ATT--T-A-AA
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         7449 11 +     29742 CAA--------T---G-GT---T-A-AA
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        19178 11 -    104932 CTA--------T---G-AT---T-A-AG
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     6388 11 -     12809 CTA--------T---G-AT---T-A-AA
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 152302 11 +    154973 CTA--------T---G-AT---T-A-AA
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                165401 10 +    265003 CAA--------T---G-AT---T-A-A-
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  9102 11 -     19904 CTA--------T---G-AT---T-A-AA
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  152441 11 -    168139 CTA--------T---G-AC---T-A-AA
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          26233 11 -    100666 CCA--------T---G-AT---T-A-CA
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70773312 11 +  92629107 CTA--------A---A-CT---T-A-AA
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75495376 11 +  98207768 TTA--------A---A-CT---T-A-AA
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67562103 11 +  89017189 CTA--------A---A-CT---T-A-AA
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74338084 11 +  97876770 CTA--------A---A-CT---T-A-AA
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             16113 11 +     98495 CTA--------C---A-AT---T-A-AA
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4430720 19 -  28371801 Ctacaaaagaaa---g-at---t-a-aa
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     97801 11 -    117718 ATA--------T---A-AT---T-A-AA
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               973247 11 +   8389877 CCA--------T---G-AT---T-A-CA
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5024323 11 +   6462685 CCA--------T---G-AT---T-A-CA
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3470744 11 -   3747815 CCA--------T---G-AT---T-A-CA
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        15981 11 +     66751 CCA--------T---C-AT---T-A-CA
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_12795               358 11 -     87886 CTA--------T---G-AT---T-A-GA
i Myrmecophaga_tridactyla.MyrTri_scaffold_12795         C 0 C 0
s Nannospalax_galili.KL201303.1                            125787 11 +    362372 CTA--------C---A-AT---T-A-AA
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                              11710 11 +     48152 CAA--------T---G-GT---T-A-AA
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4492573 11 -  14209539 CTA--------T---G-AT---T-A-AG
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3956893 11 -   4490290 CTA--------T---G-AT---T-A-AA
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  52709 11 +     94413 CTA--------T---G-AT---T-A-AA
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_762468                            1515 11 -      2755 CAG--------T---G-GT---T-A-AA
i Nomascus_annamensis.k141_762468                       C 0 C 0
s Nomascus_concolor.k141_256540                              8125 11 -      8966 CAG--------T---G-GT---T-A-AA
i Nomascus_concolor.k141_256540                         C 0 C 0
s Nomascus_gabriellae.k141_1400361                           2066 11 -      2203 CAG--------T---G-GT---T-A-AA
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_453                             7378 11 +     12787 cag--------t---g-gt---t-a-aa
i Nomascus_siki_b.tarseq_453                        I 29 C 0
s Nomascus_siki_a.k141_421408                                  1980 11 +     16235 CAG--------T---G-GT---T-A-AA
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                40105 11 +   3668941 Cta--------t---g-at---t-a-aa
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65573293 11 -  95554990 CTA--------T---G-AT---T-A-AA
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_6040852                             929 11 +      1868 CTA--------T---G-AT---T-A-AA
i Nycticebus_coucang.k141_6040852                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65681472 11 +  89412551 CTA--------T---G-AT---T-A-AA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            5001310 11 -  23139505 ttc--------t---a-at---t-a-aa
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3692943 11 +  10294119 Cta--------c---a-at---t-t-aa
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             686809 11 -   3126709 CTA--------T---G-AT---T-A-AG
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1086090 11 +   1425656 CTA--------T---G-AT---T-A-Aa
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         44159 11 +     78940 CTA--------T---G-AT---T-A-AA
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  131848  7 +    145789 CTA--------C---T-AT---------
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 I 3
s Onychomys_torridus.OnyTor_scaffold_12578                  44782 11 +     62360 CTT--------C---A-AT---T-A-AA
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7230567 11 -   7562323 CTA--------T---G-AT---T-A-AA
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_371885              1776 11 +      3658 CTA--------T---G-AT---T-A-AA
i Orycteropus_afer.OryAfe_flattened_line_371885         C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141885268 11 + 163896628 tcc--------t---a-at---t-a-aa
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      317237 11 -    505867 Cta--------t---g-at---t-a-aa
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        6414 11 -     53940 CTA--------T---G-AT---T-A-AA
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18014380  7 -  38779656 cta--------t---g-at---------
i Otolemur_garnettii.GL873528.1                         C 0 I 3
s Ovis_aries.CM001582.2                                 134085308 11 - 275406953 CTA--------T---G-AT---T-A-AA
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      86554 11 +    140051 CTA--------T---G-AT---T-A-AA
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127579792 11 - 205426864 CAA--------t---g-gt---t-a-ag
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120156952 11 - 196562556 CAA--------t---g-gt---t-a-ag
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  41999 11 +    295523 CTG--------T---A-AT---T-A-AA
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3645813 11 +  18214204 ctg--------t---a-at---t-a-aa
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5035450 11 -   6340057 ctg--------t---a-at---t-a-aa
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1074193 11 -   1292953 CTA--------T---G-AT---T-A-AA
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188161692 11 - 188283584 CAA--------T---G-GT---T-A-AA
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              4782 11 +     25005 CAA--------T---G-GT---T-A-AA
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47519064 11 +  47705337 CAA--------T---G-GT---T-A-AA
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 73055 11 -    104429 CAA--------T---G-GT---T-A-AA
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   11587 11 +     14967 CAA--------T---G-GT---T-A-AA
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 7452 11 -      7628 CAA--------T---G-GT---T-A-AA
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    123466 11 -    135482 CTA--------G---G-AT---T-A-AA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          12078 11 -     23713 CTA--------T---G-AT---T-A-AA
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           13229 11 +     61070 CTA--------T---G-AT---T-A-AA
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       3494 11 +     49596 CTA--------T---T-TT---C-A-AA
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615458.1                       2840595 11 -   3366660 CTA--------C---A-AT---T-A-AA
i Peromyscus_maniculatus.KI615458.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    19208 11 -     36578 CTA--------C---A-AA---T-A-AA
i Petromus_typicus.PetTyp_scaffold_33007                C 0 I 1
s Phocoena_phocoena.PhoPho_flattened_line_53071              5030 11 +      8220 CTA--------T---G-AT---T-A-AA
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Piliocolobus_badius.k141_1987485                           5250 11 -      5908 CAA--------T---G-GT---T-A-AA
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       5869 11 -     17985 CAA--------T---G-GT---T-A-AA
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            5236 11 +      7694 CAA--------T---G-GT---T-A-AA
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26743719 11 +  26888534 CAA--------T---G-GT---T-A-AA
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306           101477 11 +    112873 CCA--------T---G-AT---T-A-CA
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990          11526 11 +     21690 CTA--------T---G-AT---T-A-AA
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 I 1
s Plecturocebus_bernhardi.k141_959214                       27357 11 +     44506 CAA--------T---G-GT---T-A-AA
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        27570 11 +     67491 CAA--------T---G-GT---T-A-AA
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      17809 11 -     98129 CAA--------T---G-GT---T-A-AA
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     27410 11 +    147771 CAA--------T---G-GT---T-A-AA
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         4045 11 -     43940 CAA--------T---G-GT---T-A-AA
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          8128 11 -     55515 CAA--------T---G-GT---T-A-AA
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         27482 11 +    152463 CAA--------T---G-GT---T-A-AA
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       5289 10 -    119457 CAA--------T---G-GT---T-A-A-
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         17204 11 +    134592 CAA--------T---G-GT---T-A-AA
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          27792 11 -     75465 CAA--------T---G-GT---T-A-AA
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              192423 11 -    373494 CAA--------t---g-gt---t-a-ag
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19813072 11 +  19899266 CAA--------T---G-GT---T-A-AG
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               8992 11 -     15069 CAA--------T---G-GT---T-A-AA
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              9107 11 +     14865 CAA--------T---G-GT---T-A-AA
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                6114 11 -      9567 CTA--------T---G-AT---T-T-TA
i Procavia_capensis.ProCapCap_scaffold_149274           I 715 C 0
s Prolemur_simus.MPIZ01000048.1                           6854028 11 +  12164890 cta--------t---g-at---t-a-aa
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     22829 11 -     30946 Cta--------t---g-at---t-a-aa
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         9130 11 +     11805 CTA--------T---G-AT---T-A-AA
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           48464 11 +     52369 CTA--------T---G-AT---T-A-AA
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         40851 11 -     44753 CTA--------T---G-AT---T-A-AA
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            22774 11 +     27322 CTA--------T---G-AT---T-A-AA
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       22420 11 -     53241 CTA--------T---G-AT---T-A-AA
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         44683 11 -     48185 CTA--------T---G-AT---T-A-AA
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           40407 12 +     77221 cta--------a---atat---t-a-aa
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            8057 11 -     27784 cta--------t---g-at---t-a-aa
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        252366 19 -    344369 CTAAAAAAGAAA---G-AT---T-A-AA
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13249026 11 -  17261082 cta--------t---g-at---t-a-aa
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             606976 11 -   3946241 cta--------t---g-at---t-a-aa
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131542144 11 - 161321710 ctg--------t---a-at---t-a-aa
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             33098 11 +     56732 CAA--------T---G-GT---T-A-AA
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6809595 11 +   6970761 CAA--------T---G-GT---T-A-AA
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             8984 11 +     18040 CAA--------T---G-GT---T-A-AA
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                22938 11 +     68503 CTA--------T---G-AT---T-A-AA
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13920798 12 +  90463843 CTA--------C---A-CT---TCA-AA
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1794858 11 +   2252614 cta--------t---g-at---t-a-aa
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                            3363 11 -     17045 CAA--------T---G-GT---T-A-AA
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206380850 11 - 206558726 CAA--------T---g-gt---t-a-aa
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44859753 11 -  45163003 CAA--------T---G-GT---T-A-AA
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                22369 11 +    109198 CTA--------C---A-AT---T-A-AA
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                      3610 11 -      4338 CTA--------T---G-AT---T-A-AG
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15677803 11 -  43202129 CGa--------t---g-gt---t-a-aa
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        9717 11 +     34089 CAA--------T---G-GT---T-A-AA
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              9656 11 -     60842 CAA--------T---G-GT---T-A-AA
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              9750 11 +     67014 CAA--------T---G-GT---T-A-AA
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              9727 11 +     60816 CAA--------T---G-GT---T-A-AA
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 9664 11 -     76454 CAA--------T---G-GT---T-A-AA
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17346436 11 -  30362882 CAA--------T---G-GT---T-A-AA
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         25757 11 -     62485 CAA--------T---G-GT---T-A-AA
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   41657 11 -    114521 CTA--------T---G-AT---T-A-GA
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        6599 11 +     15331 CAA--------T---G-GT---T-A-AA
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      11974 11 +     20762 CAA--------T---G-GT---T-A-AA
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         121978 11 +    130994 CAA--------T---G-GT---T-A-AA
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           40758 11 +     46263 CAA--------T---G-GT---T-A-AA
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     33903 11 +     42640 CAA--------T---G-GT---T-A-AA
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        16925 11 +     30600 CAA--------T---G-GT---T-A-AA
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  106959 11 -    120886 CTA--------C---A-GT---T-A-AA
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            26297 12 +    739146 CTA--------T---G-AT---T-TTTT
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17776628 12 -  27805282 cca--------t---g-ac---a-tttt
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2245312 11 +   2842873 tta--------t---a-at---t-a-aa
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             241143 11 -    276980 GTA--------T---G-AT---T-A-AA
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            35342 11 +     62062 CTA--------T---G-AC---T-A-AA
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189277332 10 + 218635234 CTA--------C---A-AT---T-A-A-
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        20103 11 -  13920577 CAG--------T---G-GT---T-A-AA
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                4322 11 +     20549 CCA--------T---T-AT---T-A-AA
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               18591 11 +     45698 CTA--------T---G-AT---T-A-AA
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      812930 11 +   1148477 CTA--------T---G-AT---T-A-AA
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  63572 11 +     99546 CTA--------T---G-AT---T-A-AA
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194013225 11 - 194193292 CAA--------T---G-gt---t-a-aa
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                  1760 11 -      3104 CTA--------T---G-AT---T-A-AA
i Tolypeutes_matacus.TolMat_scaffold_475685             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  140065 11 -    259118 CTA--------T---G-AT---T-A-AA
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        30246 11 +     38948 CAA--------T---G-GT---T-A-AA
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   23806 11 -     32910 CAA--------T---G-GT---T-A-AA
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      5707 11 -     12939 CAA--------T---G-GT---T-A-AA
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       5135 11 -     14244 CAA--------T---G-GT---T-A-AA
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           46528 11 -     54611 CAA--------T---G-GT---T-A-AA
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        4329 11 -     11566 CAA--------T---G-GT---T-A-AA
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     6513 11 -     15592 CAA--------T---G-GT---T-A-AA
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          5165 11 +     14371 CAA--------T---G-GT---T-A-AA
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   3451 11 +     12481 CAA--------T---G-GT---T-A-AA
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        3432 11 -     24393 CAA--------T---G-GT---T-A-AA
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       8576 11 -     28054 CAA--------T---G-GT---T-A-AA
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44663360 11 -  44834318 CAA--------T---G-GT---T-A-AA
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       5672 11 +     13828 CAA--------T---G-GT---T-A-AA
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                  11104 11 +     90398 CTA--------T---G-AT---T-T-AA
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16091637 11 +  31416278 cta--------t---g-at---t-a-aa
i Trichechus_manatus.JH594618.1                         I 528 C 0
s Tupaia_chinensis.KB320831.1                             2802365 11 -   3938065 TTA--------T---g-at---t-a-aa
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                   11189 11 +     13056 TTA--------T---G-GT---T-A-AA
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69319297 11 -  96451834 CTA--------T---G-AT---T-A-AA
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                    2028  6 +    136657 CTA--------T---A-A----------
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 C 0
s Ursus_maritimus.KK498671.1                              6522793 11 +  28682327 caa--------t---g-at---t-a-aa
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                 10695 11 -     20643 CTA--------T---G-AT---T-A-AA
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             30230 11 -     33872 CTA--------T---G-AT---T-A-AA
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1530326  7 -   2331223 ---------------G-AT---T-G-AA
i Vicugna_pacos.KN269600.1                              I 2 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                146464 11 -    281493 CTA--------T---G-AT---T-A-AA
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       132808 11 -    134049 CTA--------T---A-AT---T-A-AA
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        221670 11 -    227762 CTA--------T---G-AT---T-A-AG
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_202118                     2411  3 -      3360 GTA-------------------------
i Zapus_hudsonius.ZapHud_scaffold_202118                C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            3890 11 -     13665 CTA--------T---G-AT---T-A-AA
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Hylobates_pileatus_a.tarseq_592                             37267 2881 -     60944 I
e Tarsius_wallacei.k141_48636                               64696  0 +     65473 C
e Tarsius_lariang.k141_609102                               31387  0 +     42269 C
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Cephalopachus_bancanus.k141_702587                        12545  0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530  0 +    345090 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               18825 1 +    209709 A
s Acinonyx_jubatus.LLWD01000356.1                         2041670 1 +   3721120 a
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    119317 1 -    189883 A
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10665538 1 +  23371972 a
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7102486 1 -  16596857 a
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_141108                   2663 1 -      7259 A
i Allactaga_bullata.AllBul_scaffold_141108              C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   6713 1 -     60446 A
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         7427 1 -     29318 A
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         6365 1 +     38766 A
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          7323 1 -     80423 A
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              2271 1 +     19852 A
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                4491 1 -     12443 A
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                             1814 1 +      5070 A
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                 1561 1 -      1641 A
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          4300 1 -     24210 A
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_494922                              804 1 -      8325 A
i Alouatta_nigerrima.k141_494922                        C 0 C 0
s Alouatta_palliata.k141_405616                              6718 1 +     16794 A
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_347198                              747 1 +      9111 A
i Alouatta_puruensis.k141_347198                        C 0 C 0
s Alouatta_seniculus.k141_790278                             5995 1 -      9835 A
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3528718 1 +   4113121 A
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      394658 1 -    631301 A
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             5946 1 +     55446 A
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 67605 1 +     78111 A
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                           10546 1 +     22701 A
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5754515 1 +   9889416 a
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                            11094 1 -    104377 A
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                              11123 1 +     23246 A
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_47262                        32 1 +     32137 A
i Aplodontia_rufa.AprRuf_scaffold_47262                 n 1 I 6
s Arctocebus_calabarensis.k141_587554                        7708 1 +      9265 A
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                12955 1 -     29036 A
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9544405 1 +  39197703 A
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             65679 1 +     85812 A
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                16689 1 +     89302 A
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             21193 1 -     58268 A
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             69187 1 +    119057 A
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              11156 1 -     25888 A
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                12233 1 -     16375 A
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               5849 1 +      6337 A
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26386128 1 +  51448160 A
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                       11301 1 -     13118 A
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   50921 1 -     72089 a
i Beatragus_hunteri.BeaHun_scaffold_21644               I 211 C 0
s Bison_bison.KN264915.1                                   305642 1 -   6870073 a
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22959748 1 + 161108492 a
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     421927 1 +    998990 a
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22668400 1 + 158972876 a
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               677264 1 +   1914593 a
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               119025 1 -    171031 A
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 18045 1 +    125063 A
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                20092 1 -    216513 A
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       12635 1 -    134917 A
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3225225 1 -   8989139 A
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           402925 1 -  15254737 A
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2978663 1 +   6889770 A
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11528391 1 +  39901454 A
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   23365 1 +     87036 A
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11275288 1 -  35597290 a
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11097785 1 +  39895921 a
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16464570 1 -  44759192 a
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21336151 1 + 157394656 A
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135714504 1 - 157403528 A
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_1011243                 1110 1 +      1208 A
i Capromys_pilorides.CapPil_scaffold_1011243            C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               63947 1 +     67245 A
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_1326                     1237 1 -    202837 A
i Castor_canadensis.CasCan_scaffold_1326                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   164965 1 -    276539 A
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15791479 1 -  24422027 A
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15803424 1 -  24440124 A
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       181596 1 +    436027 A
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18896759 1 -  29618158 A
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                13409 1 -     26817 A
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                17652 1 +     25043 A
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4370209 1 +   7569818 a
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_171732          366 1 +      8380 A
i Ceratotherium_simum_cottoni.CerCot_scaffold_171732    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6560653 1 +   6739814 a
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      32130 1 +     60454 A
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          7334 1 -     21101 A
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         64644 1 -    107033 A
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        7504 1 -     17608 A
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          4672 1 +     45019 A
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           4948 1 +     15177 A
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          7554 1 +     16677 A
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           29750 1 +     35983 A
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11996275 1 +  12117833 A
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46483257 1 +  46592721 A
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                       1368 1 -     27215 A
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       7568 1 +     35577 A
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        7362 1 -     25661 A
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        7534 1 -     17744 A
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        26903 1 +     37128 A
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           5921 1 -      6963 A
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           64449 1 -     68416 A
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_854352                             751 1 +     27737 A
i Cheirogaleus_medius.k141_854352                       C 0 C 0
s Cheracebus_lucifer.k141_619653                            10716 1 -     18223 A
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              2457 1 +    188999 A
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           46756 1 +     57117 A
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          51436 1 +     54541 A
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15966167 1 +  43084221 a
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         76237 1 +    196370 A
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          20418 1 +     40510 A
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15145088 1 -  15256731 A
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      39552 1 -     53260 A
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101150111 1 + 101219884 A
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                19949 1 -     21363 A
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           765253 1 +    964067 A
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_304221              2875 1 -      7053 A
i Chrysochloris_asiatica.ChrAsi_scaffold_304221         C 0 C 0
s Colobus_angolensis.KN985967.1                          10889882 1 +  10971483 a
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147667810 1 + 156195979 A
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            19793 1 +     23629 A
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60624214 1 +  78930452 A
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         4623 1 -      5782 A
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 284221 1 -    399297 A
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53036507 1 +  72327488 a
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              4095 1 -     22648 C
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            59606 1 -     70449 A
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  216357 1 -    956709 A
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 37883 1 -     67205 A
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                22712 1 +     26546 A
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             63854 1 -    236241 A
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          186970 1 -   6883506 A
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16850396 1 +  31942871 A
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80042720 1 -  96802777 A
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18703165 1 -  18957592 a
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 328608 1 +    993696 a
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   9242 1 +    151128 A
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   161666 1 +    228994 A
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3661508 1 +   4240102 A
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  3882 1 -     11986 A
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                42426 1 -     73477 A
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           23005147 1 -  44670279 A
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 15326 1 +     24177 a
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1498715 1 +   1727528 A
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7836661 1 +  15467074 A
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        245216 1 -    369425 A
i Ellobius_lutescens.LOEQ01003611.1                     I 3 C 0
s Ellobius_talpinus.LOJH01076532.1                           1568 1 +      9159 A
i Ellobius_talpinus.LOJH01076532.1                      I 3 C 0
s Enhydra_lutris.KZ291749.1                              85879541 1 +  99434291 a
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4710925 1 +   6522550 A
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5858469 1 -   7175178 a
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13356955 1 +  41866177 a
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          18445 1 +     92910 a
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11543950 1 +  16010500 A
i Erinaceus_europaeus.JH835290.1                        I 2 C 0
s Erythrocebus_patas.Contig8                             48782121 1 -  48907691 A
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          320971 1 +    330699 A
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             67423 1 +     89355 A
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                             10513 1 +     13586 A
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_1015201                              3772 1 -      4292 A
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            16909 1 +     36558 A
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            13231 1 +     60246 A
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                16716 1 +    109717 A
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 4699 1 -     19505 A
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                21374 1 +     27497 A
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           23830 1 +     26808 A
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                38562 1 +     46535 A
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              21303 1 -     29447 A
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129901243 1 - 159252932 a
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129288220 1 - 158578461 a
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 29410 1 +     52776 A
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13898141 1 -  19261668 a
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     216564 1 -    847004 A
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           18926 1 -     43889 A
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          16067 1 +     27357 A
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               160836 1 +    324696 A
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    188440 1 -    189561 A
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           17757 1 -     18683 A
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                              10524 1 -     14630 A
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119657624 1 - 195582420 a
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   81059 1 +    118900 A
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         7305 1 +     10286 A
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             5786 1 -     11661 A
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                            11110 1 +     56096 A
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        34359 1 -     42470 A
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        50985 1 -     54384 A
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              24723 1 +     53719 A
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                35537 1 -     91191 A
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2562426 1 +  31725842 a
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               65018 1 +     73687 A
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              152794 1 +    277961 A
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      286263 1 -    477199 a
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959               3536 1 +     26078 A
i Hipposideros_galeritus.HipGal_scaffold_52959          C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 25159 1 -     67322 A
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           23083 1 -    119109 A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                    11352 1 +     22540 A
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7131622 1 +  13083262 a
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   2844 1 +      3484 A
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              14947 1 +     17520 A
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8580414 1 +  11848649 A
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               29567 1 +     37189 A
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          55277 1 -    147782 A
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    7476 1 +     26176 A
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258412663 1 - 285822530 A
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        29987 1 +     39228 A
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            59351 1 +     63517 A
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        37735 1 -     38897 A
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      3777 1 -     13103 A
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3093790 1 -   3498232 A
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    22263 1 +     22452 A
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            141875 1 +   3060487 A
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19253742 1 +  19376315 A
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           16529 1 +     84689 A
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3784262 1 +   6799190 A
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20600572 1 -  62548349 a
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11097241 1 +  39895028 a
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             25491 1 +     74745 A
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12711954 1 +  12821369 A
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                4527 1 -     26467 A
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           52398 1 +     63263 A
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 4508 1 -     26361 A
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_2667654                                 811 1 -      5626 A
i Macaca_leonina.k141_2667654                           C 0 C 0
s Macaca_maura.k141_251854                                  50927 1 -     79256 A
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196041025 1 + 196197964 a
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11451195 1 +  11645122 a
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   9881 1 -     46448 A
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                7542 1 -     13212 A
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 21224 1 -     55006 A
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43846646 1 +  43892939 A
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               22508 1 -     24607 A
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               9878 1 -     27140 A
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                703942 1 +    802869 A
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43442911 1 -  43563597 A
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4455710 1 -   4543643 A
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            154225 1 +    252755 G
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             41823 1 +     58827 G
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36879488 1 +  64221397 a
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       67744 1 -    234502 A
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             8636 1 -     87323 A
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 3443 1 +    115071 A
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1053081 1 -  26018355 A
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    4538 1 -     12939 A
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16515704 1 +  47401472 a
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  46761 1 -     48017 A
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               26902 1 -     32043 A
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22826052 1 -  98408828 A
i Microtus_ochrogaster.CM001673.1                       I 3 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8215253 1 +  10048721 a
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            39712 1 +     45743 A
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         7460 1 +     29742 A
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        19189 1 -    104932 A
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     6399 1 -     12809 A
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 152313 1 +    154973 A
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                165411 1 +    265003 A
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  9113 1 -     19904 G
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  152452 1 -    168139 A
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          26244 1 -    100666 C
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70773323 1 +  92629107 A
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75495387 1 +  98207768 A
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67562114 1 +  89017189 A
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74338095 1 +  97876770 A
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             16124 1 +     98495 A
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4430739 1 -  28371801 a
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     97812 1 -    117718 A
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               973258 1 +   8389877 A
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5024334 1 +   6462685 A
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3470755 1 -   3747815 A
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        15992 1 +     66751 A
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_12795               369 1 -     87886 A
i Myrmecophaga_tridactyla.MyrTri_scaffold_12795         C 0 C 0
s Nannospalax_galili.KL201303.1                            125798 1 +    362372 A
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                              11721 1 +     48152 A
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4492584 1 -  14209539 A
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3956904 1 -   4490290 A
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  52720 1 +     94413 A
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                40116 1 +   3668941 a
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65573304 1 -  95554990 A
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_6040852                             940 1 +      1868 A
i Nycticebus_coucang.k141_6040852                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65681483 1 +  89412551 A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            5001321 1 -  23139505 a
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3692954 1 +  10294119 a
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             686820 1 -   3126709 A
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1086101 1 +   1425656 a
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         44170 1 +     78940 A
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  131858 1 +    145789 A
i Ondatra_zibethicus.OndZib_scaffold_6821               I 3 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  44793 1 +     62360 A
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7230578 1 -   7562323 A
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_371885              1787 1 +      3658 A
i Orycteropus_afer.OryAfe_flattened_line_371885         C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141885279 1 + 163896628 a
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      317248 1 -    505867 a
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        6425 1 -     53940 A
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18014390 1 -  38779656 a
i Otolemur_garnettii.GL873528.1                         I 3 C 0
s Ovis_aries.CM001582.2                                 134085319 1 - 275406953 A
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      86565 1 +    140051 A
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127579803 1 - 205426864 a
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120156963 1 - 196562556 a
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  42010 1 +    295523 A
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3645824 1 +  18214204 a
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5035461 1 -   6340057 a
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1074204 1 -   1292953 A
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188161703 1 - 188283584 A
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              4793 1 +     25005 A
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47519075 1 +  47705337 A
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 73066 1 -    104429 A
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   11598 1 +     14967 A
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 7463 1 -      7628 A
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    123477 1 -    135482 A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          12089 1 -     23713 A
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           13240 1 +     61070 A
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       3505 1 +     49596 A
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615458.1                       2840606 1 -   3366660 A
i Peromyscus_maniculatus.KI615458.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    19220 1 -     36578 A
i Petromus_typicus.PetTyp_scaffold_33007                I 1 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              5041 1 +      8220 A
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Piliocolobus_badius.k141_1987485                           5261 1 -      5908 A
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       5880 1 -     17985 A
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            5247 1 +      7694 A
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26743730 1 +  26888534 A
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306           101488 1 +    112873 A
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990          11538 1 +     21690 A
i Platanista_gangetica.PlaMin_flattened_line_72990      I 1 C 0
s Plecturocebus_bernhardi.k141_959214                       27368 1 +     44506 A
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        27581 1 +     67491 A
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      17820 1 -     98129 A
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     27421 1 +    147771 A
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         4056 1 -     43940 A
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          8139 1 -     55515 A
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         27493 1 +    152463 A
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_miltoni.k141_841561                         17215 1 +    134592 A
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          27803 1 -     75465 A
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              192434 1 -    373494 a
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19813083 1 +  19899266 A
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               9003 1 -     15069 A
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              9118 1 +     14865 A
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                6125 1 -      9567 A
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6854039 1 +  12164890 a
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     22840 1 -     30946 a
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         9141 1 +     11805 A
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           48475 1 +     52369 A
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         40862 1 -     44753 A
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            22785 1 +     27322 A
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       22431 1 -     53241 A
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         44694 1 -     48185 A
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           40419 1 +     77221 a
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            8068 1 -     27784 a
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        252385 1 -    344369 A
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13249037 1 -  17261082 a
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             606987 1 -   3946241 a
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131542155 1 - 161321710 a
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             33109 1 +     56732 A
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6809606 1 +   6970761 A
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             8995 1 +     18040 A
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                22949 1 +     68503 A
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13920810 1 +  90463843 A
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1794869 1 +   2252614 a
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                            3374 1 -     17045 A
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206380861 1 - 206558726 a
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44859764 1 -  45163003 A
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                22380 1 +    109198 A
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 I 1
s Saiga_tatarica.SaiTat_scaffold_371890                      3621 1 -      4338 G
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 I 211
s Saimiri_boliviensis.NW_024100938.1                     15677814 1 -  43202129 a
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        9728 1 +     34089 A
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              9667 1 -     60842 A
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              9761 1 +     67014 A
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              9738 1 +     60816 A
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 9675 1 -     76454 A
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17346447 1 -  30362882 A
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         25768 1 -     62485 A
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   41668 1 -    114521 A
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        6610 1 +     15331 A
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      11985 1 +     20762 A
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         121989 1 +    130994 A
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           40769 1 +     46263 A
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     33914 1 +     42640 A
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        16936 1 +     30600 A
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  106970 1 -    120886 A
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            26309 1 +    739146 A
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17776640 1 -  27805282 a
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2245323 1 +   2842873 a
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             241154 1 -    276980 A
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            35353 1 +     62062 A
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189277342 1 + 218635234 A
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                4333 1 +     20549 A
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               18602 1 +     45698 A
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      812941 1 +   1148477 A
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  63583 1 +     99546 A
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194013236 1 - 194193292 a
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                  1771 1 -      3104 A
i Tolypeutes_matacus.TolMat_scaffold_475685             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  140076 1 -    259118 A
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        30257 1 +     38948 A
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   23817 1 -     32910 A
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      5718 1 -     12939 A
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       5146 1 -     14244 A
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           46539 1 -     54611 A
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        4340 1 -     11566 A
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     6524 1 -     15592 A
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          5176 1 +     14371 A
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   3462 1 +     12481 A
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        3443 1 -     24393 A
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       8587 1 -     28054 A
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44663371 1 -  44834318 A
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       5683 1 +     13828 A
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                  11115 1 +     90398 A
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16091648 1 +  31416278 a
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2802376 1 -   3938065 a
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                   11200 1 +     13056 A
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69319308 1 -  96451834 A
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                    2034 1 +    136657 C
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 C 0
s Ursus_maritimus.KK498671.1                              6522804 1 +  28682327 a
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                 10706 1 -     20643 A
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             30241 1 -     33872 A
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1530333 1 -   2331223 A
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                146475 1 -    281493 A
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       132819 1 -    134049 A
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        221681 1 -    227762 A
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            3901 1 -     13665 A
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Nomascus_siki_a.k141_421408                                  1991 0 +     16235 C
e Zapus_hudsonius.ZapHud_scaffold_202118                     2414 0 -      3360 C
e Hylobates_pileatus_a.tarseq_592                             37267 2881 -     60944 I
e Hylobates_pileatus_b.ContigUN                                 14629855 0 -  25970782 C
e Hylobates_muelleri.k141_1139146                            2406 0 +      4161 C
e Hylobates_klossii.k141_468230                              4509 0 +      5464 C
e Hylobates_agilis.k141_1136966                              1029 0 +      9785 C
e Hylobates_abbotti.k141_1816750                             3019 0 +      3202 C
e Tarsius_wallacei.k141_48636                               64696 0 +     65473 C
e Tarsius_lariang.k141_609102                               31387 0 +     42269 C
e Plecturocebus_hoffmannsi.k141_985533                       5299 0 -    119457 C
e Pithecia_vanzolinii.k141_831006                           15424 0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514 0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521 0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292 0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093 0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038 0 +     78826 C
e Pithecia_albicans.k141_991845                             45662 0 -     61926 C
e Cephalopachus_bancanus.k141_702587                        12545 0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530 0 +    345090 C
e Nomascus_siki_b.tarseq_453                             7389 0 +     12787 C
e Nomascus_annamensis.k141_762468                            1526 0 -      2755 C
e Symphalangus_syndactylus.tarseq_24                        20114 0 -  13920577 C
e Nomascus_gabriellae.k141_1400361                           2077 0 -      2203 C
e Nomascus_concolor.k141_256540                              8136 0 -      8966 C
e Hoolock_leuconedys.ctg315                                   351541 394 +    431944 I

a score=0.000000
s hg38.chr4_GL000008v2_random                               18826 4 +    209709 AG-AA
s Acinonyx_jubatus.LLWD01000356.1                         2041671 4 +   3721120 ag-aa
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    119318 4 -    189883 TG-AA
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10665539 4 +  23371972 ag-aa
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7102487 4 -  16596857 ag-aa
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_141108                   2664 4 -      7259 GG-AA
i Allactaga_bullata.AllBul_scaffold_141108              C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   6714 4 -     60446 AG-AA
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         7428 4 -     29318 AG-AA
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         6366 4 +     38766 AG-AA
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          7324 4 -     80423 AG-AA
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              2272 4 +     19852 AG-AA
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                4492 4 -     12443 AG-AA
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                             1815 4 +      5070 AG-AA
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                 1562 4 -      1641 AG-AA
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          4301 4 -     24210 AG-AA
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_494922                              805 4 -      8325 AG-AA
i Alouatta_nigerrima.k141_494922                        C 0 C 0
s Alouatta_palliata.k141_405616                              6719 4 +     16794 AG-AA
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_347198                              748 4 +      9111 AG-AA
i Alouatta_puruensis.k141_347198                        C 0 C 0
s Alouatta_seniculus.k141_790278                             5996 4 -      9835 AG-AA
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3528719 4 +   4113121 AG-AA
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      394659 4 -    631301 AG-AA
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             5947 4 +     55446 AG-AA
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 67606 4 +     78111 A-GAA
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                           10547 4 +     22701 A-GAA
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5754516 4 +   9889416 a-gaa
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                            11095 4 -    104377 A-GAA
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                              11124 4 +     23246 A-GAA
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     3742 4 +     11424 AG-AA
i Aplodontia_rufa.AprRuf_scaffold_101456                I 1 C 0
s Arctocebus_calabarensis.k141_587554                        7709 4 +      9265 AG-AA
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                12956 4 -     29036 CT-AA
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9544406 4 +  39197703 AG-AA
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             65680 4 +     85812 AG-AA
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                16690 4 +     89302 AG-AA
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             21194 4 -     58268 AG-AA
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             69188 4 +    119057 AG-AA
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              11157 4 -     25888 AG-AA
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                12234 4 -     16375 CG-AA
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               5850 4 +      6337 CG-AA
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26386129 4 +  51448160 AG-AA
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                       11302 4 -     13118 AG-AA
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   50922 4 -     72089 gg-aa
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   305643 4 -   6870073 at-aa
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22959749 4 + 161108492 at-aa
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     421928 4 +    998990 at-aa
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22668401 4 + 158972876 at-aa
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               677265 4 +   1914593 at-aa
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               119026 4 -    171031 AG-AA
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 18046 4 +    125063 AG-AA
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                20093 4 -    216513 AG-AA
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       12636 4 -    134917 AG-AA
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3225226 4 -   8989139 AG-AA
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           402926 4 -  15254737 AG-AA
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2978664 4 +   6889770 AG-AA
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11528392 4 +  39901454 AG-AA
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   23366 4 +     87036 AG-AA
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11275289 4 -  35597290 ag-aa
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11097786 4 +  39895921 ag-aa
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16464571 4 -  44759192 ag-aa
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21336152 4 + 157394656 AG-AA
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135714505 4 - 157403528 AG-AA
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_1011243                 1111 4 +      1208 AG-GA
i Capromys_pilorides.CapPil_scaffold_1011243            C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               63948 4 +     67245 AG-AA
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_1326                     1238 4 -    202837 GG-AA
i Castor_canadensis.CasCan_scaffold_1326                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   164966 4 -    276539 AG-CA
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15791480 4 -  24422027 AG-GA
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15803425 4 -  24440124 AG-GA
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       181597 4 +    436027 AG-GA
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18896760 3 -  29618158 A--AA
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                13410 3 -     26817 A--AA
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                17653 3 +     25043 A--AA
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4370210 4 +   7569818 ag-aa
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_171732          367 4 +      8380 AG-AA
i Ceratotherium_simum_cottoni.CerCot_scaffold_171732    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6560654 4 +   6739814 ag-aa
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      32131 4 +     60454 AG-AA
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          7335 4 -     21101 AG-AA
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         64645 4 -    107033 AG-AA
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        7505 4 -     17608 AG-AA
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          4673 4 +     45019 AG-AA
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           4949 4 +     15177 AG-AA
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          7555 4 +     16677 AG-AA
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           29751 4 +     35983 AG-AA
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11996276 4 +  12117833 AG-AA
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46483258 4 +  46592721 AG-AA
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                       1369 4 -     27215 AG-AA
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       7569 4 +     35577 AG-AA
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        7363 4 -     25661 AG-AA
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        7535 4 -     17744 AG-AA
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        26904 4 +     37128 AG-AA
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           5922 4 -      6963 AG-AA
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           64450 4 -     68416 AG-AA
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_854352                             752 4 +     27737 AG-AA
i Cheirogaleus_medius.k141_854352                       C 0 C 0
s Cheracebus_lucifer.k141_619653                            10717 4 -     18223 AG-AA
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              2458 4 +    188999 AG-AA
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           46757 4 +     57117 AG-AA
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          51437 4 +     54541 AG-AA
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15966168 4 +  43084221 ag-ga
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         76238 4 +    196370 AG-AA
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          20419 4 +     40510 AG-AA
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15145089 4 -  15256731 AG-AA
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      39553 4 -     53260 AG-AA
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101150112 4 + 101219884 AG-AA
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                19950 4 -     21363 GG-AA
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           765254 4 +    964067 GG-AA
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_304221              2876 4 -      7053 AT-AA
i Chrysochloris_asiatica.ChrAsi_scaffold_304221         C 0 C 0
s Colobus_angolensis.KN985967.1                          10889883 4 +  10971483 ag-aa
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147667811 4 + 156195979 AG-AA
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            19794 4 +     23629 AG-AA
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60624215 1 +  78930452 A----
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         4624 4 -      5782 AG-AA
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 284222 4 -    399297 GG-AA
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53036508 4 +  72327488 gg-aa
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              4096 4 -     22648 AT-AA
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            59607 4 -     70449 AG-AA
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  216358 3 -    956709 -T-CA
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 37884 4 -     67205 AG-GA
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                22713 4 +     26546 AG-GA
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             63855 4 -    236241 AG-GA
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          186971 4 -   6883506 AG-AA
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16850397 4 +  31942871 AG-AA
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80042721 4 -  96802777 AG-AA
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18703166 4 -  18957592 ag-aa
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 328609 4 +    993696 ag-aa
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   9243 4 +    151128 AG-AA
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   161667 4 +    228994 AG-AA
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3661509 4 +   4240102 GA-GA
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  3883 4 -     11986 GA-GA
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                42427 4 -     73477 AG-GA
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           23005148 4 -  44670279 AT-AA
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 15327 4 +     24177 ag-aa
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1498716 4 +   1727528 AG-AA
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7836662 4 +  15467074 AG-AA
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        245217 4 -    369425 GT-AG
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01076532.1                           1569 4 +      9159 GG-AA
i Ellobius_talpinus.LOJH01076532.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85879542 4 +  99434291 ag-aa
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4710926 4 +   6522550 AG-AA
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5858470 4 -   7175178 ag-aa
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13356956 4 +  41866177 ag-aa
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          18446 4 +     92910 ag-aa
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11543951 4 +  16010500 AT-AA
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48782122 4 -  48907691 AG-AA
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          320972 4 +    330699 AG-AA
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             67424 4 +     89355 AG-AA
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                             10514 4 +     13586 AG-AA
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_1015201                              3773 4 -      4292 AG-AA
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            16910 4 +     36558 AG-AA
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            13232 4 +     60246 AG-AA
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                16717 4 +    109717 AG-AA
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 4700 4 -     19505 AG-AA
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                21375 4 +     27497 AG-AA
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           23831 4 +     26808 AG-AA
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                38563 4 +     46535 AG-AA
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              21304 4 -     29447 AG-AA
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129901244 4 - 159252932 ag-aa
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129288221 4 - 158578461 ag-aa
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 29411 4 +     52776 AG-AA
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13898142 4 -  19261668 ag-ga
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     216565 4 -    847004 AG-AA
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           18927 4 -     43889 AG-AA
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          16068 4 +     27357 AG-AA
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               160837 4 +    324696 AG-AA
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    188441 4 -    189561 AC-AA
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           17758 4 -     18683 AG-CA
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                              10525 4 -     14630 AG-AA
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119657625 4 - 195582420 ag-aa
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   81060 4 +    118900 AG-CA
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         7306 4 +     10286 AG-AA
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             5787 4 -     11661 AG-AA
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                            11111 4 +     56096 AG-AA
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        34360 4 -     42470 AG-AA
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        50986 4 -     54384 AG-AA
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              24724 4 +     53719 AG-AA
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                35538 4 -     91191 AG-AA
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2562427 4 +  31725842 ag-ga
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               65019 3 +     73687 A--AA
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              152795 4 +    277961 AG-AA
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      286264 4 -    477199 ag-aa
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959               3537 4 +     26078 AG-AA
i Hipposideros_galeritus.HipGal_scaffold_52959          C 0 C 0
s Hoolock_leuconedys.ctg79                                     10449 2 -   7690867 ---AA
i Hoolock_leuconedys.ctg79                                 I 11 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 25160 4 -     67322 AG-AA
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           23084 4 -    119109 AG-GA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_1816750                             3019 2 +      3202 ---AA
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1136966                              1029 2 +      9785 ---AA
i Hylobates_agilis.k141_1136966                         C 0 C 0
s Hylobates_klossii.k141_468230                              4509 2 +      5464 ---AA
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14629855 2 -  25970782 ---AA
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            2406 2 +      4161 ---AA
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                    11353 4 +     22540 CG-GA
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7131623 4 +  13083262 ag-aa
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   2845 4 +      3484 AG-AA
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              14948 4 +     17520 AG-AA
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8580415 4 +  11848649 GG-AA
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               29568 4 +     37189 AG-AA
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          55278 4 -    147782 AG-AA
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    7477 4 +     26176 AG-CA
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258412664 4 - 285822530 AG-AA
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        29988 4 +     39228 AG-AA
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            59352 4 +     63517 AG-AA
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        37736 4 -     38897 AG-AA
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      3778 4 -     13103 AG-AA
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3093791 4 -   3498232 AG-AA
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    22264 4 +     22452 AC-AA
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            141876 4 +   3060487 AG-AA
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19253743 4 +  19376315 AG-AA
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           16530 4 +     84689 AG-AA
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3784263 4 +   6799190 AG-AA
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20600573 4 -  62548349 at-aa
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11097242 4 +  39895028 ag-aa
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             25492 4 +     74745 AG-AA
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12711955 4 +  12821369 AG-AA
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                4528 4 -     26467 AG-AA
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           52399 4 +     63263 AG-AA
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 4509 4 -     26361 AG-AA
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_2667654                                 812 4 -      5626 AG-AA
i Macaca_leonina.k141_2667654                           C 0 C 0
s Macaca_maura.k141_251854                                  50928 4 -     79256 AG-AA
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196041026 4 + 196197964 ag-aa
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11451196 4 +  11645122 ag-aa
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   9882 4 -     46448 AG-AA
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                7543 4 -     13212 AG-AA
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 21225 4 -     55006 AG-AA
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43846647 4 +  43892939 AG-AA
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               22509 4 -     24607 AG-AA
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               9879 4 -     27140 AG-AA
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                703943 4 +    802869 AG-AT
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43442912 4 -  43563597 AG-AA
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4455711 4 -   4543643 AG-AA
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            154226 4 +    252755 AG-AA
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             41824 4 +     58827 AG-AA
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36879489 4 +  64221397 ag-aa
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       67745 4 -    234502 AG-AA
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             8637 4 -     87323 AG-AA
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 3444 4 +    115071 TG-AA
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1053082 4 -  26018355 GG-AA
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    4539 4 -     12939 AG-AA
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16515705 4 +  47401472 ag-aa
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  46762 4 -     48017 AT-AA
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               26903 4 -     32043 AG-AA
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22826053 4 -  98408828 GG-AA
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8215254 4 +  10048721 aa-aa
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            39713 4 +     45743 AA-AA
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         7461 4 +     29742 AG-AA
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        19190 4 -    104932 AG-AA
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     6400 4 -     12809 AT-AA
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 152314 4 +    154973 AG-AA
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                165412 4 +    265003 AG-AA
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  9114 4 -     19904 AG-AA
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  152453 4 -    168139 AG-AA
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          26245 4 -    100666 AG-AA
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70773324 4 +  92629107 CA-GA
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75495388 4 +  98207768 CA-GA
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67562115 4 +  89017189 CA-GA
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74338096 4 +  97876770 CA-GA
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             16125 4 +     98495 AT-CA
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 I 206
s Mustela_putorius.JH417978.1                             4430740 4 -  28371801 ag-aa
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     97813 4 -    117718 AG-GA
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               973259 4 +   8389877 AG-AA
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5024335 4 +   6462685 AG-AA
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3470756 4 -   3747815 AG-AA
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        15993 4 +     66751 AG-AA
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_12795               370 4 -     87886 AG-AA
i Myrmecophaga_tridactyla.MyrTri_scaffold_12795         C 0 C 0
s Nasalis_larvatus.k141_153429                              11722 4 +     48152 AG-AA
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4492585 4 -  14209539 AG-AA
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3956905 4 -   4490290 AG-AA
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  52721 4 +     94413 AG-AA
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_762468                            1526 2 -      2755 ---AA
i Nomascus_annamensis.k141_762468                       C 0 C 0
s Nomascus_concolor.k141_256540                              8136 2 -      8966 ---AA
i Nomascus_concolor.k141_256540                         C 0 C 0
s Nomascus_gabriellae.k141_1400361                           2077 2 -      2203 ---AA
i Nomascus_gabriellae.k141_1400361                      C 0 C 0
s Nomascus_siki_b.tarseq_453                             7389 2 +     12787 ---aa
i Nomascus_siki_b.tarseq_453                        C 0 C 0
s Nomascus_siki_a.k141_421408                                  1991 2 +     16235 ---AA
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                40117 4 +   3668941 ag-aa
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65573305 4 -  95554990 AG-AA
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_6040852                             941 4 +      1868 AG-AA
i Nycticebus_coucang.k141_6040852                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65681484 4 +  89412551 AG-AA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            5001322 4 -  23139505 at-aa
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3692955 4 +  10294119 ag-ga
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             686821 4 -   3126709 AG-AA
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1086102 4 +   1425656 ag-aa
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         44171 4 +     78940 AG-AA
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  131859 4 +    145789 GG-AA
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  44794 4 +     62360 GG-AA
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7230579 4 -   7562323 AG-AA
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_371885              1788 4 +      3658 AG-AT
i Orycteropus_afer.OryAfe_flattened_line_371885         C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141885280 4 + 163896628 ac-aa
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      317249 4 -    505867 ag-aa
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        6426 4 -     53940 AG-AA
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18014391 4 -  38779656 ag-aa
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134085320 4 - 275406953 AG-AA
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      86566 4 +    140051 AG-AA
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127579804 4 - 205426864 ag-aa
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120156964 4 - 196562556 ag-aa
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  42011 4 +    295523 AG-AA
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3645825 4 +  18214204 ag-aa
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5035462 4 -   6340057 ag-aa
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1074205 4 -   1292953 AG-aa
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188161704 4 - 188283584 AG-AA
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              4794 4 +     25005 AG-AA
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47519076 4 +  47705337 AG-AA
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 73067 4 -    104429 AG-AA
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   11599 4 +     14967 AG-AA
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 7464 4 -      7628 AG-AA
i Papio_ursinus.k141_1345919                            C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    123478 4 -    135482 AG-AA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          12090 4 -     23713 AG-AA
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           13241 4 +     61070 AG-AA
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       3506 4 +     49596 GA-GA
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615458.1                       2840607 4 -   3366660 GG-AA
i Peromyscus_maniculatus.KI615458.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    19221 4 -     36578 AG-GT
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              5042 4 +      8220 AG-AA
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Piliocolobus_badius.k141_1987485                           5262 4 -      5908 AG-AA
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       5881 4 -     17985 AG-AA
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            5248 4 +      7694 AG-AA
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26743731 4 +  26888534 AG-AA
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306           101489 4 +    112873 AG-AA
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990          11539 4 +     21690 AG-AA
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       27369 4 +     44506 AG-AA
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        27582 4 +     67491 AG-AA
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      17821 4 -     98129 AG-AA
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     27422 4 +    147771 AG-AA
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         4057 4 -     43940 AG-AA
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          8140 4 -     55515 AG-AA
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         27494 4 +    152463 AG-AA
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       5299 3 -    119457 -G-AA
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         17216 4 +    134592 AG-AA
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          27804 4 -     75465 AG-AA
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              192435 4 -    373494 ag-aa
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19813084 4 +  19899266 AG-AA
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               9004 4 -     15069 AG-AA
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              9119 4 +     14865 AG-AA
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                6126 3 -      9567 A--AA
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6854040 4 +  12164890 ag-aa
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     22841 4 -     30946 ca-aa
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         9142 4 +     11805 CG-AA
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           48476 4 +     52369 CG-AA
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         40863 4 -     44753 CG-AA
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            22786 4 +     27322 CG-AA
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       22432 4 -     53241 CG-AA
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         44695 4 -     48185 CA-AA
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           40420 4 +     77221 tg-aa
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            8069 4 -     27784 ag-aa
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        252386 4 -    344369 AG-AA
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13249038 4 -  17261082 ag-aa
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             606988 4 -   3946241 ag-aa
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131542156 4 - 161321710 ag-aa
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             33110 4 +     56732 AG-AA
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6809607 4 +   6970761 AG-AA
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             8996 4 +     18040 AG-AA
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                22950 4 +     68503 AG-AA
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13920811 4 +  90463843 CG-GA
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1794870 4 +   2252614 ag-aa
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                            3375 4 -     17045 AG-AA
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206380862 4 - 206558726 ag-aa
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44859765 4 -  45163003 AG-AA
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                22382 4 +    109198 AA-AA
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            I 1 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                      3833 4 -      4338 gg-aa
i Saiga_tatarica.SaiTat_scaffold_371890                 I 211 C 0
s Saimiri_boliviensis.NW_024100938.1                     15677815 4 -  43202129 at-aa
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        9729 4 +     34089 AT-AA
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              9668 4 -     60842 AT-AA
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              9762 4 +     67014 AT-AA
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              9739 4 +     60816 AT-AA
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 9676 4 -     76454 AT-AA
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17346448 3 -  30362882 A--AA
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         25769 3 -     62485 A--AA
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   41669 4 -    114521 AG-AA
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        6611 4 +     15331 AG-AA
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      11986 4 +     20762 AG-AA
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         121990 4 +    130994 AG-AA
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           40770 4 +     46263 AG-AA
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     33915 4 +     42640 AG-AA
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        16937 4 +     30600 AG-AA
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  106971 4 -    120886 GG-GA
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            26310 4 +    739146 AA-AA
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17776641 3 -  27805282 a--aa
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2245324 4 +   2842873 ag-aa
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             241155 4 -    276980 AG-AA
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            35354 4 +     62062 AG-AA
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189277343 4 + 218635234 AG-AA
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        20114 2 -  13920577 ---AA
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                4334 4 +     20549 AA-AA
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               18603 4 +     45698 AG-AA
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      812942 4 +   1148477 AG-AA
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  63584 4 +     99546 AG-AA
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194013237 4 - 194193292 ag-aa
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                  1772 4 -      3104 AG-GA
i Tolypeutes_matacus.TolMat_scaffold_475685             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  140077 4 -    259118 AG-AA
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        30258 4 +     38948 AG-AA
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   23818 4 -     32910 AG-AA
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      5719 4 -     12939 AG-AA
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       5147 4 -     14244 AG-AA
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           46540 4 -     54611 AG-AA
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        4341 4 -     11566 AG-AA
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     6525 4 -     15592 AG-AA
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          5177 4 +     14371 AG-AA
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   3463 4 +     12481 AG-AA
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        3444 4 -     24393 AG-AA
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       8588 4 -     28054 AG-AA
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44663372 4 -  44834318 AG-AA
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       5684 4 +     13828 AG-AA
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                  11116 4 +     90398 AG-AA
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16091649 4 +  31416278 ag-aa
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2802377 4 -   3938065 ag-aa
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                   11201 4 +     13056 AG-AA
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69319309 4 -  96451834 AG-AA
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                    2035 4 +    136657 AG-AA
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 C 0
s Ursus_maritimus.KK498671.1                              6522805 4 +  28682327 ag-aa
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                 10707 4 -     20643 AG-AA
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             30242 4 -     33872 AG-AA
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1530334 4 -   2331223 AG-AA
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                146476 4 -    281493 AG-AA
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       132820 4 -    134049 AG-AA
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        221682 4 -    227762 AG-AA
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_202118                     2414 1 -      3360 ----A
i Zapus_hudsonius.ZapHud_scaffold_202118                C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            3902 4 -     13665 AG-AA
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Hylobates_pileatus_a.tarseq_592                             37267 2881 -     60944 I
e Tarsius_wallacei.k141_48636                               64696 0 +     65473 C
e Tarsius_lariang.k141_609102                               31387 0 +     42269 C
e Pithecia_vanzolinii.k141_831006                           15424 0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514 0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521 0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292 0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093 0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038 0 +     78826 C
e Pithecia_albicans.k141_991845                             45662 0 -     61926 C
e Nannospalax_galili.KL201303.1                            125799 0 +    362372 C
e Cephalopachus_bancanus.k141_702587                        12545 0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530 0 +    345090 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               18830 2 +    209709 AT
s Acinonyx_jubatus.LLWD01000356.1                         2041675 2 +   3721120 ag
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    119322 2 -    189883 AG
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10665543 2 +  23371972 ag
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7102491 2 -  16596857 ag
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_141108                   2668 2 -      7259 AG
i Allactaga_bullata.AllBul_scaffold_141108              C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   6718 2 -     60446 AT
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         7432 2 -     29318 AT
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         6370 2 +     38766 GT
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          7328 2 -     80423 AT
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              2276 2 +     19852 AT
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                4496 2 -     12443 AT
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                             1819 2 +      5070 AT
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                 1566 2 -      1641 AT
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          4305 2 -     24210 AT
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_494922                              809 2 -      8325 AC
i Alouatta_nigerrima.k141_494922                        C 0 C 0
s Alouatta_palliata.k141_405616                              6723 2 +     16794 AT
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_347198                              752 2 +      9111 AT
i Alouatta_puruensis.k141_347198                        C 0 C 0
s Alouatta_seniculus.k141_790278                             6000 2 -      9835 AT
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3528723 2 +   4113121 gt
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      394663 2 -    631301 AT
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             5951 2 +     55446 GT
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 67610 2 +     78111 AT
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                           10551 2 +     22701 AT
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5754520 2 +   9889416 at
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                            11099 2 -    104377 AT
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                              11128 2 +     23246 AT
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     3746 2 +     11424 AG
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        7713 2 +      9265 AT
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                12960 2 -     29036 AT
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9544410 2 +  39197703 AT
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             65684 2 +     85812 AT
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                16694 2 +     89302 AT
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             21198 2 -     58268 AT
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             69192 2 +    119057 AT
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              11161 2 -     25888 AT
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                12238 2 -     16375 AT
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               5854 2 +      6337 AT
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26386133 2 +  51448160 GT
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                       11306 2 -     13118 GT
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   50926 2 -     72089 gc
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   305647 2 -   6870073 gt
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22959753 2 + 161108492 gt
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     421932 2 +    998990 gt
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22668405 2 + 158972876 gt
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               677269 2 +   1914593 gt
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               119030 2 -    171031 AT
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 18050 2 +    125063 AT
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                20097 2 -    216513 AT
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       12640 2 -    134917 AT
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3225230 2 -   8989139 CT
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           402930 2 -  15254737 CT
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2978668 2 +   6889770 CT
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11528396 2 +  39901454 AG
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   23370 2 +     87036 AG
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11275293 2 -  35597290 ag
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11097790 2 +  39895921 ag
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16464575 2 -  44759192 ag
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21336156 2 + 157394656 gt
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135714509 2 - 157403528 GT
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_1011243                 1115 2 +      1208 AG
i Capromys_pilorides.CapPil_scaffold_1011243            C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               63952 2 +     67245 AT
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_1326                     1242 2 -    202837 AG
i Castor_canadensis.CasCan_scaffold_1326                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   164970 2 -    276539 GT
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15791484 2 -  24422027 AG
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15803429 2 -  24440124 AG
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       181601 2 +    436027 AG
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18896763 2 -  29618158 AT
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                13413 2 -     26817 AT
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                17656 2 +     25043 AT
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4370214 2 +   7569818 at
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_171732          371 2 +      8380 AT
i Ceratotherium_simum_cottoni.CerCot_scaffold_171732    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6560658 2 +   6739814 at
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      32135 2 +     60454 AT
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          7339 2 -     21101 AT
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         64649 2 -    107033 AT
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        7509 2 -     17608 AT
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          4677 2 +     45019 AT
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           4953 2 +     15177 AT
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          7559 2 +     16677 AT
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           29755 2 +     35983 AT
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11996280 2 +  12117833 AT
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46483262 2 +  46592721 AT
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                       1373 2 -     27215 AT
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       7573 2 +     35577 AT
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        7367 2 -     25661 AT
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        7539 2 -     17744 AT
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        26908 2 +     37128 AT
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           5926 2 -      6963 AT
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           64454 2 -     68416 AT
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_854352                             756 2 +     27737 AT
i Cheirogaleus_medius.k141_854352                       C 0 C 0
s Cheracebus_lucifer.k141_619653                            10721 2 -     18223 AC
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              2462 2 +    188999 AC
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           46761 2 +     57117 AC
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          51441 2 +     54541 AC
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15966172 2 +  43084221 ag
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         76242 2 +    196370 AT
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          20423 2 +     40510 AT
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15145093 2 -  15256731 GT
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      39557 2 -     53260 GT
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101150116 2 + 101219884 GT
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                19954 2 -     21363 AT
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           765258 2 +    964067 AT
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_304221              2880 2 -      7053 AT
i Chrysochloris_asiatica.ChrAsi_scaffold_304221         C 0 C 0
s Colobus_angolensis.KN985967.1                          10889887 2 +  10971483 at
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147667815 2 + 156195979 AT
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            19798 2 +     23629 AT
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         4628 2 -      5782 AT
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 284226 2 -    399297 GG
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53036512 2 +  72327488 ag
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              4100 2 -     22648 AT
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            59611 2 -     70449 AG
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  216361 1 -    956709 T-
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 37888 2 -     67205 AG
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                22717 2 +     26546 AG
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             63859 2 -    236241 AG
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          186975 2 -   6883506 AT
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16850401 2 +  31942871 AT
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80042725 2 -  96802777 GT
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18703170 2 -  18957592 at
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 328613 2 +    993696 at
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   9247 2 +    151128 AT
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   161671 2 +    228994 AG
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3661513 2 +   4240102 AG
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  3887 2 -     11986 AG
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                42431 2 -     73477 AG
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           23005152 2 -  44670279 AT
i Echinops_telfairi.JH980316.1                          C 0 I 1723
s Eidolon_helvum.KE772537.1                                 15331 2 +     24177 at
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1498720 2 +   1727528 gt
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7836666 2 +  15467074 GT
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        245221 2 -    369425 AA
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01076532.1                           1573 2 +      9159 AG
i Ellobius_talpinus.LOJH01076532.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85879546 2 +  99434291 ag
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4710930 2 +   6522550 AC
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5858474 2 -   7175178 at
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13356960 2 +  41866177 at
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          18450 2 +     92910 at
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11543955 2 +  16010500 Gt
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48782126 2 -  48907691 GT
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          320976 2 +    330699 GT
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             67428 2 +     89355 GT
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                             10518 2 +     13586 AT
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_1015201                              3777 2 -      4292 AT
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            16914 2 +     36558 AT
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            13236 2 +     60246 AT
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                16721 2 +    109717 AT
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 4704 2 -     19505 AT
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                21379 2 +     27497 AT
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           23835 2 +     26808 AT
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                38567 2 +     46535 AT
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              21308 2 -     29447 AT
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129901248 2 - 159252932 ag
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129288225 2 - 158578461 ag
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 29415 2 +     52776 AG
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13898146 2 -  19261668 aa
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     216569 2 -    847004 AT
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           18931 2 -     43889 AT
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          16072 2 +     27357 AT
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               160841 2 +    324696 AT
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    188445 2 -    189561 GT
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           17762 2 -     18683 AC
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                              10529 2 -     14630 AT
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119657629 2 - 195582420 at
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   81064 2 +    118900 AG
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         7310 2 +     10286 AT
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             5791 2 -     11661 AT
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                            11115 2 +     56096 AT
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        34364 2 -     42470 AT
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        50990 2 -     54384 AT
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              24728 2 +     53719 AG
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                35542 2 -     91191 GT
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2562431 2 +  31725842 aa
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               65022 2 +     73687 AT
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              152799 2 +    277961 GT
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      286268 2 -    477199 at
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959               3541 2 +     26078 AT
i Hipposideros_galeritus.HipGal_scaffold_52959          C 0 C 0
s Hoolock_leuconedys.ctg79                                     10451 2 -   7690867 AT
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 25164 2 -     67322 AG
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           23088 2 -    119109 AG
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_1816750                             3021 2 +      3202 AT
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1136966                              1031 2 +      9785 AT
i Hylobates_agilis.k141_1136966                         C 0 C 0
s Hylobates_klossii.k141_468230                              4511 2 +      5464 AT
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14629857 2 -  25970782 AT
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            2408 2 +      4161 AT
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                    11357 2 +     22540 AG
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7131627 2 +  13083262 ag
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   2849 2 +      3484 AT
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              14952 2 +     17520 GT
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8580419 2 +  11848649 AG
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               29572 2 +     37189 GT
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          55282 2 -    147782 AT
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    7481 2 +     26176 AT
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258412668 2 - 285822530 AT
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        29992 2 +     39228 AT
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            59356 2 +     63517 AT
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        37740 2 -     38897 AT
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      3782 2 -     13103 AT
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3093795 2 -   3498232 AG
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    22268 2 +     22452 AT
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            141880 2 +   3060487 GT
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19253747 2 +  19376315 AT
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           16534 2 +     84689 AT
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3784267 2 +   6799190 AT
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20600577 2 -  62548349 at
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11097246 2 +  39895028 ag
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             25496 2 +     74745 AT
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12711959 2 +  12821369 AT
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                4532 2 -     26467 AT
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           52403 2 +     63263 AT
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 4513 2 -     26361 AT
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_2667654                                 816 2 -      5626 AT
i Macaca_leonina.k141_2667654                           C 0 C 0
s Macaca_maura.k141_251854                                  50932 2 -     79256 AT
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196041030 2 + 196197964 at
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11451200 2 +  11645122 at
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   9886 2 -     46448 AT
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                7547 2 -     13212 AT
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 21229 2 -     55006 AT
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43846651 2 +  43892939 AT
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               22513 2 -     24607 AT
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               9883 2 -     27140 AT
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                703947 2 +    802869 AT
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43442916 2 -  43563597 AT
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4455715 2 -   4543643 AT
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            154230 2 +    252755 AT
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             41828 2 +     58827 AT
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36879493 2 +  64221397 ag
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       67749 2 -    234502 AT
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             8641 2 -     87323 AG
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 3448 2 +    115071 AG
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1053086 2 -  26018355 ag
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    4543 2 -     12939 GT
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16515709 2 +  47401472 at
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  46766 2 -     48017 AT
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               26907 2 -     32043 AT
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22826057 2 -  98408828 AG
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8215258 2 +  10048721 at
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            39717 2 +     45743 AT
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         7465 2 +     29742 AT
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        19194 2 -    104932 AG
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     6404 2 -     12809 AT
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 152318 2 +    154973 GT
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                165416 2 +    265003 AT
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  9118 2 -     19904 GT
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  152457 2 -    168139 AG
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          26249 2 -    100666 AT
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70773328 2 +  92629107 Ag
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75495392 2 +  98207768 AG
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67562119 2 +  89017189 Ag
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74338100 2 +  97876770 Ag
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             16335 2 +     98495 ag
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 206 C 0
s Mustela_putorius.JH417978.1                             4430744 2 -  28371801 ag
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     97817 2 -    117718 AG
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               973263 2 +   8389877 AT
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5024339 2 +   6462685 AT
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3470760 2 -   3747815 AT
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        15997 2 +     66751 AT
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_12795               374 2 -     87886 AT
i Myrmecophaga_tridactyla.MyrTri_scaffold_12795         C 0 C 0
s Nannospalax_galili.KL201303.1                            125799 2 +    362372 AG
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                              11726 2 +     48152 AT
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4492589 2 -  14209539 AG
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3956909 2 -   4490290 GT
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  52725 2 +     94413 AT
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_762468                            1528 2 -      2755 AT
i Nomascus_annamensis.k141_762468                       C 0 C 0
s Nomascus_concolor.k141_256540                              8138 2 -      8966 AT
i Nomascus_concolor.k141_256540                         C 0 C 0
s Nomascus_gabriellae.k141_1400361                           2079 2 -      2203 AT
i Nomascus_gabriellae.k141_1400361                      C 0 I 8
s Nomascus_siki_b.tarseq_453                             7391 2 +     12787 at
i Nomascus_siki_b.tarseq_453                        C 0 C 0
s Nomascus_siki_a.k141_421408                                  1993 2 +     16235 AT
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                40121 2 +   3668941 ag
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65573309 2 -  95554990 AT
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_6040852                             945 2 +      1868 AT
i Nycticebus_coucang.k141_6040852                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65681488 2 +  89412551 AT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            5001326 2 -  23139505 at
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3692959 2 +  10294119 ag
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             686825 2 -   3126709 AG
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1086106 2 +   1425656 gt
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         44175 2 +     78940 GT
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  131863 2 +    145789 AG
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  44798 2 +     62360 AG
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7230583 2 -   7562323 GT
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_371885              1792 2 +      3658 GT
i Orycteropus_afer.OryAfe_flattened_line_371885         C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141885284 2 + 163896628 at
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      317253 2 -    505867 ag
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        6430 2 -     53940 AT
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18014395 2 -  38779656 at
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134085324 2 - 275406953 gt
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      86570 2 +    140051 GT
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127579808 2 - 205426864 at
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120156968 2 - 196562556 at
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  42015 2 +    295523 AG
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3645829 2 +  18214204 ag
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5035466 2 -   6340057 ag
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1074209 2 -   1292953 gt
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188161708 2 - 188283584 at
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              4798 2 +     25005 AT
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47519080 2 +  47705337 AT
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 73071 2 -    104429 AT
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   11603 2 +     14967 AT
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_1345919                                 7468 2 -      7628 AT
i Papio_ursinus.k141_1345919                            C 0 N 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    123482 2 -    135482 AG
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          12094 2 -     23713 AT
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           13245 2 +     61070 AT
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       3510 1 +     49596 A-
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615458.1                       2840611 2 -   3366660 AG
i Peromyscus_maniculatus.KI615458.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    19225 2 -     36578 AG
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              5046 2 +      8220 GT
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Piliocolobus_badius.k141_1987485                           5266 2 -      5908 AT
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       5885 2 -     17985 AT
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            5252 2 +      7694 AT
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26743735 2 +  26888534 AT
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306           101493 2 +    112873 AT
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990          11543 2 +     21690 GT
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       27373 2 +     44506 AC
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        27586 2 +     67491 AC
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      17825 2 -     98129 AC
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     27426 2 +    147771 AC
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         4061 2 -     43940 AC
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          8144 2 -     55515 AC
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         27498 2 +    152463 AC
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       5302 2 -    119457 AC
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         17220 2 +    134592 AC
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          27808 2 -     75465 AC
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              192439 2 -    373494 at
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19813088 2 +  19899266 AT
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               9008 2 -     15069 AT
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              9123 2 +     14865 AT
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                6129 2 -      9567 AT
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6854044 2 +  12164890 at
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     22845 2 -     30946 at
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         9146 2 +     11805 AT
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           48480 2 +     52369 AT
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         40867 2 -     44753 AT
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            22790 2 +     27322 AT
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       22436 2 -     53241 AT
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         44699 2 -     48185 AT
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           40424 2 +     77221 ag
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            8073 2 -     27784 at
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        252390 2 -    344369 AG
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13249042 2 -  17261082 at
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             606992 2 -   3946241 at
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131542160 2 - 161321710 ag
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             33114 2 +     56732 AT
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6809611 2 +   6970761 AT
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             9000 2 +     18040 AT
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                22954 2 +     68503 GT
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13920815 2 +  90463843 AG
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1794874 2 +   2252614 at
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                            3379 2 -     17045 AT
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206380866 2 - 206558726 at
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44859769 2 -  45163003 AT
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                22386 2 +    109198 AT
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                      3837 2 -      4338 gc
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15677819 2 -  43202129 at
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        9733 2 +     34089 AT
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              9672 2 -     60842 AT
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              9766 2 +     67014 AT
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              9743 2 +     60816 AT
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 9680 2 -     76454 AT
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17346451 2 -  30362882 AT
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         25772 2 -     62485 AT
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   41673 2 -    114521 AT
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        6615 2 +     15331 AT
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      11990 2 +     20762 AT
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         121994 2 +    130994 AT
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           40774 2 +     46263 AT
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     33919 2 +     42640 AT
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        16941 2 +     30600 AT
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  106975 2 -    120886 AG
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            26314 2 +    739146 AT
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17776644 2 -  27805282 at
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2245328 2 +   2842873 ag
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             241159 2 -    276980 AG
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            35358 2 +     62062 AG
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189277347 2 + 218635234 Gt
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        20116 2 -  13920577 AT
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                4338 2 +     20549 AT
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               18607 2 +     45698 AT
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      812946 2 +   1148477 AT
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  63588 2 +     99546 AT
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194013241 2 - 194193292 at
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                  1776 2 -      3104 AT
i Tolypeutes_matacus.TolMat_scaffold_475685             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  140081 2 -    259118 AT
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        30262 2 +     38948 AT
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   23822 2 -     32910 AT
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      5723 2 -     12939 AT
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       5151 2 -     14244 AT
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           46544 2 -     54611 AT
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        4345 2 -     11566 AT
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     6529 2 -     15592 AT
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          5181 2 +     14371 AT
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   3467 2 +     12481 AT
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        3448 2 -     24393 AT
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       8592 2 -     28054 AT
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44663376 2 -  44834318 AT
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       5688 2 +     13828 AT
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                  11120 2 +     90398 GT
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16091653 2 +  31416278 at
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2802381 2 -   3938065 gt
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                   11205 2 +     13056 GT
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69319313 2 -  96451834 GT
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                    2039 2 +    136657 CT
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 C 0
s Ursus_maritimus.KK498671.1                              6522809 2 +  28682327 ag
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                 10711 2 -     20643 AT
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             30246 2 -     33872 AT
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1530338 2 -   2331223 CT
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                146480 2 -    281493 AG
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       132824 2 -    134049 AG
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        221686 2 -    227762 AG
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_202118                     2415 2 -      3360 CG
i Zapus_hudsonius.ZapHud_scaffold_202118                C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            3906 2 -     13665 GT
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Condylura_cristata.JH655880.1                          60624216 0 +  78930452 C
e Hylobates_pileatus_a.tarseq_592                             37267 2881 -     60944 I
e Tarsius_wallacei.k141_48636                               64696 0 +     65473 C
e Tarsius_lariang.k141_609102                               31387 0 +     42269 C
e Pithecia_vanzolinii.k141_831006                           15424 0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514 0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521 0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292 0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093 0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038 0 +     78826 C
e Pithecia_albicans.k141_991845                             45662 0 -     61926 C
e Cephalopachus_bancanus.k141_702587                        12545 0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530 0 +    345090 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               18832 9 +    209709 TACTTA----AAA
s Acinonyx_jubatus.LLWD01000356.1                         2041677 9 +   3721120 cacttA----AAA
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    119324 9 -    189883 GACTTA----AAA
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10665545 9 +  23371972 tactTA----AAA
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7102493 9 -  16596857 cacTTA----AAA
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_141108                   2670 9 -      7259 CGCCTG----AAA
i Allactaga_bullata.AllBul_scaffold_141108              C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   6720 9 -     60446 CACTTA----AAA
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         7434 9 -     29318 CACTTA----AAA
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         6372 9 +     38766 CACTTA----AAA
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          7330 9 -     80423 CACTTA----AAA
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              2278 9 +     19852 CACTTT----AAA
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                4498 9 -     12443 CACTTT----AAA
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                             1821 9 +      5070 CACTTT----AAA
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                 1568 9 -      1641 CACTTT----AAA
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          4307 9 -     24210 CACTTT----AAA
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_494922                              811 9 -      8325 CACTTT----AAA
i Alouatta_nigerrima.k141_494922                        C 0 C 0
s Alouatta_palliata.k141_405616                              6725 9 +     16794 CACTTT----AAA
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_347198                              754 9 +      9111 CACTTT----AAA
i Alouatta_puruensis.k141_347198                        C 0 C 0
s Alouatta_seniculus.k141_790278                             6002 9 -      9835 CACTTT----AAA
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3528725 9 +   4113121 taatta----aaa
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      394665 9 -    631301 CATTTA----AAA
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             5953 9 +     55446 TAATTA----AAA
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 67612 9 +     78111 CACTTT----AAA
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                           10553 9 +     22701 CACTTT----AAA
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5754522 9 +   9889416 cacttt----aAA
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                            11101 9 -    104377 CACTTT----AAA
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                              11130 9 +     23246 CACTTT----AAA
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     3748 9 +     11424 CATTTA----AAA
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 I 4
s Arctocebus_calabarensis.k141_587554                        7715 9 +      9265 CACTTA----AAA
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                12962 9 -     29036 CATTTA----AAA
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9544412 9 +  39197703 CGCTTT----AAA
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             65686 9 +     85812 CGCTTT----AAA
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                16696 9 +     89302 CGCTTT----AAA
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             21200 9 -     58268 CGCTTT----AAA
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             69194 9 +    119057 CGCTTT----AAA
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              11163 9 -     25888 CGCTTT----AAA
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                12240 9 -     16375 CACTTA----AAA
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               5856 9 +      6337 CACTTA----AAA
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26386135 9 +  51448160 CACTTA----AAA
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                       11308 9 -     13118 CACTTA----AAA
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   50928 9 -     72089 cAATTA----AAA
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   305649 9 -   6870073 taatta----aaa
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22959755 9 + 161108492 taatta----aaa
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     421934 9 +    998990 taatta----aaa
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22668407 9 + 158972876 taatta----aaa
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               677271 9 +   1914593 taatta----aaa
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               119032 9 -    171031 CGCTTT----AAA
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 18052 9 +    125063 CGCTTT----AAA
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                20099 9 -    216513 CGCTTT----AAA
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       12642 9 -    134917 CGCTTT----AAA
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3225232 9 -   8989139 CACTTA----AAA
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           402932 9 -  15254737 CACTTA----AAA
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2978670 9 +   6889770 CACTTA----AAA
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11528398 9 +  39901454 CATTTT----AAA
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   23372 9 +     87036 CATTTT----AAA
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11275295 9 -  35597290 catttt----aaa
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11097792 9 +  39895921 catttt----aaa
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16464577 9 -  44759192 catttt----aaa
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21336158 9 + 157394656 taatta----aaa
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135714511 9 - 157403528 TAATTA----AAA
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_1011243                 1117 8 +      1208 CACTTA----A-A
i Capromys_pilorides.CapPil_scaffold_1011243            C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               63954 9 +     67245 TATTTA----AAA
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_1326                     1244 9 -    202837 TACTTG----AAA
i Castor_canadensis.CasCan_scaffold_1326                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   164972 9 -    276539 AACTTA----AAA
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15791486 9 -  24422027 Cactta----aaa
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15803431 9 -  24440124 Cactta----aaa
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       181603 9 +    436027 CACTTA----AAA
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18896765 9 -  29618158 CACTTT----AAA
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                13415 9 -     26817 CACTTT----AAA
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                17658 9 +     25043 CACTTT----AAA
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4370216 9 +   7569818 cactta----AAA
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_171732          373 9 +      8380 CACTTA----AAA
i Ceratotherium_simum_cottoni.CerCot_scaffold_171732    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6560660 9 +   6739814 cactta----aaa
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      32137 9 +     60454 CACTTA----AAA
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          7341 9 -     21101 CACTTA----AAA
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         64651 9 -    107033 CACTTA----AAA
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        7511 9 -     17608 CACTTA----AAA
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          4679 9 +     45019 CACTTA----AAA
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           4955 9 +     15177 CACTCA----AAA
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          7561 9 +     16677 CACTTA----AAA
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           29757 9 +     35983 CACTTA----AAA
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11996282 9 +  12117833 CACTTA----AAA
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46483264 9 +  46592721 CACTTA----AAA
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                       1375 9 -     27215 CACTTA----AAA
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       7575 9 +     35577 CACTTA----AAA
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        7369 9 -     25661 CACTTA----AAA
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        7541 9 -     17744 CACTTA----AAA
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        26910 9 +     37128 CACTCA----AAA
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           5928 9 -      6963 CACTTA----AAA
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           64456 9 -     68416 CACTTA----AAA
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_854352                             758 9 +     27737 CACTTA----AAA
i Cheirogaleus_medius.k141_854352                       C 0 C 0
s Cheracebus_lucifer.k141_619653                            10723 9 -     18223 TACTTT----AAA
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              2464 9 +    188999 TGCTTT----AAA
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           46763 9 +     57117 TGCTTT----AAA
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          51443 9 +     54541 TGCTTT----AAA
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15966174 9 +  43084221 cactta----aaa
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         76244 9 +    196370 CGCTTT----AAA
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          20425 9 +     40510 CGCTTT----AAA
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15145095 9 -  15256731 CACTTG----AAA
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      39559 9 -     53260 CACTTG----AAA
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101150118 9 + 101219884 CACTTA----AAA
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                19956 9 -     21363 CACTTA----CAA
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           765260 9 +    964067 CACTTA----CAA
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_304221              2882 9 -      7053 CACTTG----GAT
i Chrysochloris_asiatica.ChrAsi_scaffold_304221         C 0 C 0
s Colobus_angolensis.KN985967.1                          10889889 9 +  10971483 cactta----AAA
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147667817 9 + 156195979 CACTTA----AAA
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            19800 9 +     23629 CACTTA----AAA
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         4630 9 -      5782 CACTTA----AAA
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 284228 9 -    399297 GAATTA----AAA
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53036514 9 +  72327488 gactta----aaa
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              4102 7 -     22648 CACT------AAT
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            59613 9 -     70449 CACTTA----AAA
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  216362 3 -    956709 ----------ACA
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 37890 8 -     67205 CACTTA----A-A
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                22719 9 +     26546 CACTTA----AAA
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             63861 9 -    236241 CACTTA----AAA
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          186977 9 -   6883506 GACTCA----AAA
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16850403 9 +  31942871 CACTTA----AAA
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80042727 9 -  96802777 CACTTA----AAA
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18703172 9 -  18957592 cattta----aaa
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 328615 9 +    993696 cactta----AAA
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   9249 9 +    151128 CACTTA----AAA
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   161673 9 +    228994 CACTTA----AAA
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3661515 9 +   4240102 AACTTA----AAA
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  3889 9 -     11986 AACTTA----AAA
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                42433 9 -     73477 CACTTA----AAA
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           23006877 9 -  44670279 cactta----AAT
i Echinops_telfairi.JH980316.1                          I 1723 C 0
s Eidolon_helvum.KE772537.1                                 15333 9 +     24177 gactca----AAA
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1498722 9 +   1727528 taatta----aaa
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7836668 9 +  15467074 CACTTA----AAA
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        245223 7 -    369425 GACTTA----A--
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01076532.1                           1575 7 +      9159 Gactta----a--
i Ellobius_talpinus.LOJH01076532.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85879548 9 +  99434291 tactta----aaa
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4710932 9 +   6522550 cactta----aaa
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5858476 9 -   7175178 cactta----aaA
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13356962 9 +  41866177 cactta----aAA
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          18452 9 +     92910 cactta----aAA
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11543957 9 +  16010500 ccttta----aaa
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48782128 9 -  48907691 CACTTA----AAA
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          320978 9 +    330699 CACTTA----AAA
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             67430 9 +     89355 CACTTA----AAA
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                             10520 9 +     13586 CACTTA----AAA
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_1015201                              3779 9 -      4292 CACTTA----AAA
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            16916 9 +     36558 CACTTA----AAA
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            13238 9 +     60246 CACTTA----AAA
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                16723 9 +    109717 CACTTA----AAA
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 4706 9 -     19505 CACTTA----AAA
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                21381 9 +     27497 CACTTA----AAA
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           23837 9 +     26808 CACTTA----AAA
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                38569 9 +     46535 CACTTA----AAA
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              21310 9 -     29447 CACTTA----AAA
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129901250 9 - 159252932 cactTA----AAA
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129288227 9 - 158578461 cacttA----AAA
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 29417 9 +     52776 CACTTA----AAA
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13898148 9 -  19261668 cactta----aaa
i Fukomys_damarensis.KN123630.1                         C 0 I 1150
s Galago_moholi.ctg555                                     216571 9 -    847004 CACTTA----AAA
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           18933 9 -     43889 CACTTA----AAA
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          16074 9 +     27357 CACTTA----AAA
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               160843 9 +    324696 AACTTA----AAA
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    188447 9 -    189561 TAATTA----AAA
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           17764 9 -     18683 CACTTA----AAA
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                              10531 9 -     14630 TACTTT----AAA
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119657631 9 - 195582420 tacttt----aaA
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   81066 9 +    118900 CACTTA----AAA
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         7312 9 +     10286 CACTTA----AAA
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             5793 9 -     11661 CACTTA----AAA
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                            11117 9 +     56096 CACTTA----AAA
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        34366 9 -     42470 CACTTA----AAA
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        50992 9 -     54384 CACTTA----AAA
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              24730 9 +     53719 CACTTA----AAA
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                35544 9 -     91191 TAATTA----AAA
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2562433 9 +  31725842 cacttA----AAA
i Heterocephalus_glaber.JH602058.1                      C 0 I 1001
s Heterohyrax_brucei.HetBruBak_scaffold_25354               65024 8 +     73687 CACTTA----A-A
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              152801 9 +    277961 TACTTG----AAA
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      286270 9 -    477199 cactta----aaa
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959               3543 9 +     26078 CACTTA----AAA
i Hipposideros_galeritus.HipGal_scaffold_52959          C 0 C 0
s Hoolock_leuconedys.ctg79                                     10453 8 -   7690867 CACTT-----AAA
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 25166 9 -     67322 CACTTA----ACA
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           23090 9 -    119109 CACTTA----AAA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_1816750                             3023 8 +      3202 CACTT-----AAA
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1136966                              1033 8 +      9785 CACTT-----AAA
i Hylobates_agilis.k141_1136966                         C 0 C 0
s Hylobates_klossii.k141_468230                              4513 8 +      5464 CACTT-----AAA
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14629859 8 -  25970782 CACTT-----AAA
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            2410 8 +      4161 CACTT-----AAA
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                    11359 9 +     22540 CACTTC----AAA
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7131629 9 +  13083262 cattta----aaa
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   2851 9 +      3484 CACTTA----AAA
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              14954 9 +     17520 CACTTT----AAA
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8580421 9 +  11848649 CCCTTA----AAA
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               29574 9 +     37189 CACTTA----AAA
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          55284 9 -    147782 CACTTT----AAA
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    7483 9 +     26176 CACTTA----AAA
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258412670 9 - 285822530 CACTTA----AAA
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        29994 9 +     39228 CATTTA----AAA
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            59358 9 +     63517 CACTTA----AAA
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        37742 9 -     38897 CACTTA----AAA
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      3784 9 -     13103 CATTTA----AAA
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3093797 9 -   3498232 CACTTA----AAA
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_62849                    22270 9 +     22452 CACTTA----AAA
i Lepus_americanus.LepAme_scaffold_62849                C 0 C 0
s Lipotes_vexillifer.KE558548.1                            141882 9 +   3060487 CACTTA----AAA
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19253749 9 +  19376315 CACTTA----AAA
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           16536 9 +     84689 CACTTA----AAA
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3784269 9 +   6799190 CACTTA----AAA
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20600579 9 -  62548349 cactta----aaa
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11097248 9 +  39895028 catttt----aaa
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             25498 9 +     74745 CACTTA----AAA
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12711961 9 +  12821369 CACTTA----AAA
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                4534 9 -     26467 CACTTA----AAA
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           52405 9 +     63263 CACTTA----AAA
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 4515 9 -     26361 CACTTA----AAA
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_2667654                                 818 9 -      5626 CACTTA----AAA
i Macaca_leonina.k141_2667654                           C 0 C 0
s Macaca_maura.k141_251854                                  50934 9 -     79256 CACTTA----AAA
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196041032 9 + 196197964 cactta----aaa
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11451202 9 +  11645122 cactta----aaa
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   9888 9 -     46448 CACTTA----AAA
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                7549 9 -     13212 CACTTA----AAA
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 21231 9 -     55006 CACTTA----AAA
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43846653 9 +  43892939 CACTTA----AAA
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               22515 9 -     24607 CACTTA----AAA
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               9885 9 -     27140 CACTTA----AAA
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                703949 9 +    802869 GACTCA----AAA
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43442918 9 -  43563597 CACTTA----AAA
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4455717 9 -   4543643 CACTTA----AAA
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            154232 9 +    252755 CACTTA----AAA
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             41830 9 +     58827 cactta----aaa
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36879495 9 +  64221397 ccttta----aaa
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       67751 9 -    234502 CACTTA----AAA
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             8643 9 -     87323 TACTTA----AAA
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 3450 9 +    115071 GACATA----AAA
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1053088 9 -  26018355 cactta----aaa
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    4545 9 -     12939 CACTTA----AAA
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16515711 9 +  47401472 cacttg----aAA
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  46768 9 -     48017 CACTTA----AAT
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               26909 9 -     32043 CATTTA----AAA
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22826059 7 -  98408828 gactta----a--
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8215260 9 +  10048721 cactta----aaa
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            39719 9 +     45743 CACTTA----AAA
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         7467 9 +     29742 CACTTA----AAA
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        19196 9 -    104932 CACTTA----AAA
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     6406 9 -     12809 CACTTA----AAA
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 152320 9 +    154973 CACTTA----AAA
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                165418 9 +    265003 CATTTT----AAA
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  9120 9 -     19904 TAATTA----AAA
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  152459 9 -    168139 CACTTA----AAA
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          26251 9 -    100666 CACTTA----AAA
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70773330 9 +  92629107 gattta----aaa
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75495394 9 +  98207768 gattta----aaa
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67562121 9 +  89017189 gattta----aaa
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74338102 9 +  97876770 gattta----aaa
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             16337 9 +     98495 cactta----aca
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4430746 9 -  28371801 tacTTA----AAA
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     97819 8 -    117718 CACTTA----A-A
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               973265 9 +   8389877 cactta----aaa
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5024341 9 +   6462685 cactta----aaa
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3470762 9 -   3747815 cactta----aaa
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        15999 9 +     66751 CACTTA----AAA
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_12795               376 9 -     87886 CACTTA----AAA
i Myrmecophaga_tridactyla.MyrTri_scaffold_12795         C 0 C 0
s Nannospalax_galili.KL201303.1                            125801 9 +    362372 CACTTA----AAA
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                              11728 9 +     48152 CACTTA----AAA
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4492591 9 -  14209539 CACTTA----AAA
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3956911 9 -   4490290 CACTGA----AAA
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  52727 9 +     94413 CACTTA----AAA
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_762468                            1530 9 -      2755 CACTT---A-AAA
i Nomascus_annamensis.k141_762468                       C 0 C 0
s Nomascus_concolor.k141_256540                              8140 9 -      8966 CACTT---A-AAA
i Nomascus_concolor.k141_256540                         C 0 C 0
s Nomascus_gabriellae.k141_655641                              15 9 -      1082 CACTT---A-AAA
i Nomascus_gabriellae.k141_655641                       n 8 I 4
s Nomascus_siki_b.tarseq_453                             7393 9 +     12787 cactt----aaaa
i Nomascus_siki_b.tarseq_453                        C 0 C 0
s Nomascus_siki_a.k141_421408                                  1995 9 +     16235 CACTT---A-AAA
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                40123 9 +   3668941 catttt----aaa
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65573311 9 -  95554990 CACTTA----AAA
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_6040852                             947 9 +      1868 CACTTA----AAA
i Nycticebus_coucang.k141_6040852                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65681490 9 +  89412551 CACTTA----AAA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            5001328 9 -  23139505 cactta----aaa
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3692961 8 +  10294119 cactta----a-a
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             686827 9 -   3126709 CACTTA----AAA
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1086108 9 +   1425656 taatta----aaa
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         44177 9 +     78940 TAATTA----AAA
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  131865 7 +    145789 GACTTA----A--
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  44800 9 +     62360 GACTTA----AAA
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7230585 9 -   7562323 CACTTA----AAA
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_371885              1794 9 +      3658 CACTTA----AAA
i Orycteropus_afer.OryAfe_flattened_line_371885         C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141885286 9 + 163896628 cacttA----AAA
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      317255 9 -    505867 catttt----aaa
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        6432 9 -     53940 CACTTA----AAA
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18014397 9 -  38779656 cactta----aaa
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134085326 9 - 275406953 taatta----aaa
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      86572 9 +    140051 TAATTA----AAA
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127579810 9 - 205426864 tactta----aaa
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120156970 9 - 196562556 tactta----aaa
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  42017 9 +    295523 CACTTA----AAA
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3645831 9 +  18214204 cactta----AAA
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5035468 9 -   6340057 cacttA----AAA
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1074211 9 -   1292953 taatta----aaa
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188161710 9 - 188283584 cactta----aaa
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              4800 9 +     25005 CACTTA----AAA
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47519082 9 +  47705337 CACTTA----AAA
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 73073 9 -    104429 CACTTA----AAA
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   11605 9 +     14967 CACTTA----AAA
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_899489                                   275 9 -     13896 CACTTA----AAA
i Papio_ursinus.k141_899489                             N 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    123484 9 -    135482 CACTTA----AAA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          12096 9 -     23713 CACTTA----AAA
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           13247 9 +     61070 CACTTA----AAA
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       3511 9 +     49596 AACTTA----AAA
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615458.1                       2840613 9 -   3366660 Gactta----aaa
i Peromyscus_maniculatus.KI615458.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    19227 9 -     36578 CATTTa----aaa
i Petromus_typicus.PetTyp_scaffold_33007                C 0 I 153
s Phocoena_phocoena.PhoPho_flattened_line_53071              5048 9 +      8220 CACTGA----AAA
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Piliocolobus_badius.k141_1987485                           5268 9 -      5908 CACTTA----AAA
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       5887 9 -     17985 CACTTA----AAA
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            5254 9 +      7694 CACTTA----AAA
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26743737 9 +  26888534 CACTTA----AAA
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306           101495 9 +    112873 CACTTA----AAA
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990          11545 9 +     21690 CACTTA----AAT
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       27375 9 +     44506 TGCTTT----AAA
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        27588 9 +     67491 TGCTTT----AAA
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      17827 9 -     98129 TGCTTT----AAA
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     27428 9 +    147771 TGCTTT----AAA
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         4063 9 -     43940 TGCTTT----AAA
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          8146 9 -     55515 TGCTTT----AAA
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         27500 9 +    152463 TGCTTT----AAA
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       5304 9 -    119457 TGCTTT----AAA
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         17222 9 +    134592 TGTTTT----AAA
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          27810 9 -     75465 TGCTTT----AAA
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              192441 9 -    373494 tactta----aaa
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19813090 9 +  19899266 TACTTA----AAA
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               9010 9 -     15069 CACTTA----AAA
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              9125 9 +     14865 CACTTA----AAA
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                6131 8 -      9567 CACTTA----A-A
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6854046 9 +  12164890 cactta----aAA
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     22847 9 -     30946 cactta----AAA
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         9148 9 +     11805 CACTTA----AAA
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           48482 9 +     52369 CACTTA----AAA
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         40869 9 -     44753 CACTTA----AAA
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            22792 9 +     27322 CACTTA----AAA
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       22438 9 -     53241 CACTTA----AAA
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         44701 9 -     48185 CACTTA----AAA
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           40426 9 +     77221 gacata----aaa
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            8075 9 -     27784 cattta----aaa
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        252392 9 -    344369 TACTTA----AAA
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13249044 9 -  17261082 gactca----AAA
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             606994 9 -   3946241 gactca----AAA
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131542162 9 - 161321710 cactta----AAA
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             33116 9 +     56732 CACTTA----AAA
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6809613 9 +   6970761 CACTTA----AAA
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             9002 9 +     18040 CACTTA----AAA
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                22956 9 +     68503 TAATTA----AAA
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13920817 9 +  90463843 GActta----aaa
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1794876 9 +   2252614 cactta----aAA
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                            3381 9 -     17045 CACTTA----AAA
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206380868 9 - 206558726 cattta----aaa
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44859771 9 -  45163003 CACTTA----AAA
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                22388 9 +    109198 GACTCA----AAA
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                      3839 9 -      4338 cAATTA----AAA
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15677821 9 -  43202129 cacttt----aaa
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        9735 9 +     34089 CACTTT----AAA
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              9674 9 -     60842 CACTTT----AAA
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              9768 9 +     67014 CACTTT----AAA
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              9745 9 +     60816 CACTTT----AAA
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 9682 9 -     76454 CACTTT----AAA
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17346453 9 -  30362882 CACTTT----AAA
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         25774 9 -     62485 CACTTT----AAA
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   41675 8 -    114521 CAC---TTAA--A
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        6617 9 +     15331 CACTTA----AAA
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      11992 9 +     20762 CACTTA----AAA
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         121996 9 +    130994 CACTTA----AAA
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           40776 9 +     46263 CACTTA----AAA
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     33921 9 +     42640 CACTTA----AAA
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        16943 9 +     30600 CACTTA----AAA
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  106977 9 -    120886 GACTTA----AAA
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            26316 9 +    739146 TACTTA----AAA
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17776646 9 -  27805282 cactta----aaa
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2245330 9 +   2842873 cattta----aaa
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             241161 9 -    276980 TGCTTA----AAA
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            35360 9 +     62062 CACTTA----AAA
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189277349 9 + 218635234 aacttt----aaa
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        20118 8 -  13920577 CACTT-----AAA
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                4340 9 +     20549 CACTTA----AAA
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               18609 9 +     45698 CACTTA----AAA
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      812948 9 +   1148477 CACTTA----AAA
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  63590 9 +     99546 CACTTA----AAA
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194013243 9 - 194193292 cactta----aaa
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                  1778 9 -      3104 CACTTA----AAA
i Tolypeutes_matacus.TolMat_scaffold_475685             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  140083 9 -    259118 CATTTA----AAA
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        30264 9 +     38948 CACTTA----AAA
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   23824 9 -     32910 CACTTA----AAA
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      5725 9 -     12939 CACTTA----AAA
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       5153 9 -     14244 CACTTA----AAA
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           46546 9 -     54611 CACTTA----AAA
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        4347 9 -     11566 CACTTA----AAA
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     6531 9 -     15592 CACTTA----AAA
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          5183 9 +     14371 CACTTA----AAA
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   3469 9 +     12481 CACTTA----AAA
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        3450 9 -     24393 CACTTA----AAA
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       8594 9 -     28054 CACTTA----AAA
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44663378 9 -  44834318 CACTTA----AAA
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       5690 9 +     13828 CACTTA----AAA
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                  11122 9 +     90398 CACCCA----AAA
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16091655 9 +  31416278 cacTTA----AAA
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2802383 4 -   3938065 c---------aaa
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                   11207 4 +     13056 C---------AAA
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69319315 9 -  96451834 CACTTA----AAA
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                    2041 4 +    136657 CAT---------A
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 C 0
s Ursus_maritimus.KK498671.1                              6522811 9 +  28682327 tacGTA----AAA
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                 10713 9 -     20643 CACTTA----AAA
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             30248 9 -     33872 CACTTA----AAA
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1530340 9 -   2331223 CACTTA----AAA
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                146482 9 -    281493 CATTTT----AAA
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       132826 9 -    134049 CATTTA----AAA
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        221688 9 -    227762 CACTTA----AAA
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_202118                     2417 9 -      3360 CACTTA----AAA
i Zapus_hudsonius.ZapHud_scaffold_202118                C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            3908 9 -     13665 CACTTA----AAA
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Condylura_cristata.JH655880.1                          60624216 0 +  78930452 C
e Hylobates_pileatus_a.tarseq_592                             37267 2881 -     60944 I
e Tarsius_wallacei.k141_48636                               64696 0 +     65473 C
e Tarsius_lariang.k141_609102                               31387 0 +     42269 C
e Pithecia_vanzolinii.k141_831006                           15424 0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514 0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521 0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292 0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093 0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038 0 +     78826 C
e Pithecia_albicans.k141_991845                             45662 0 -     61926 C
e Cephalopachus_bancanus.k141_702587                        12545 0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530 0 +    345090 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               18841 4 +    209709 AT---GA
s Acinonyx_jubatus.LLWD01000356.1                         2041686 4 +   3721120 GT---GA
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    119333 4 -    189883 GT---GA
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10665554 4 +  23371972 GT---GA
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 I 25
s Ailurus_fulgens.LNAC01000003.1                          7102502 4 -  16596857 GT---GA
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_141108                   2679 4 -      7259 GT---AC
i Allactaga_bullata.AllBul_scaffold_141108              C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   6729 4 -     60446 GT---GA
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         7443 4 -     29318 GT---GA
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         6381 4 +     38766 GT---GA
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          7339 4 -     80423 GT---GA
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              2287 4 +     19852 GT---AA
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                4507 4 -     12443 GT---AA
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                             1830 4 +      5070 GT---AA
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                 1577 4 -      1641 GT---AA
i Alouatta_juara.k141_799181                            C 0 C 0
s Alouatta_macconnelli.k141_2318944                          4316 4 -     24210 GT---AA
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_494922                              820 4 -      8325 GT---AA
i Alouatta_nigerrima.k141_494922                        C 0 C 0
s Alouatta_palliata.k141_405616                              6734 4 +     16794 GT---AA
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_347198                              763 4 +      9111 GT---AA
i Alouatta_puruensis.k141_347198                        C 0 C 0
s Alouatta_seniculus.k141_790278                             6011 4 -      9835 GT---AA
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3528734 4 +   4113121 at---ga
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      394674 4 -    631301 GT---GA
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             5962 4 +     55446 GT---GA
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 67621 4 +     78111 GT---AA
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                           10562 4 +     22701 GT---AA
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5754531 4 +   9889416 GT---AA
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                            11110 4 -    104377 GT---AA
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                              11139 4 +     23246 GT---AA
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_47262                        39 4 +     32137 GT---GA
i Aplodontia_rufa.AprRuf_scaffold_47262                 I 6 n 4
s Arctocebus_calabarensis.k141_587554                        7724 4 +      9265 GT---GA
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                12971 4 -     29036 GT---GA
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9544421 4 +  39197703 GT---AA
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             65695 4 +     85812 GT---AA
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                16705 4 +     89302 GT---AA
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             21209 4 -     58268 GT---AA
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             69203 4 +    119057 GT---AA
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              11172 4 -     25888 GT---AA
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                12249 4 -     16375 GT---GA
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               5865 4 +      6337 GT---GA
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26386144 4 +  51448160 GT---GA
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                       11317 4 -     13118 GT---GA
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   50937 4 -     72089 AT---GA
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   305658 4 -   6870073 at---ga
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22959764 4 + 161108492 at---ga
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     421943 4 +    998990 at---ga
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22668416 4 + 158972876 at---ga
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               677280 4 +   1914593 at---ga
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               119041 4 -    171031 GT---AA
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 18061 4 +    125063 GT---AA
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                20108 4 -    216513 GT---AA
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       12651 4 -    134917 GT---AA
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3225241 4 -   8989139 GT---GA
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           402941 4 -  15254737 GT---GA
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2978679 4 +   6889770 GT---GA
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11528407 4 +  39901454 AT---GG
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   23381 4 +     87036 AT---GG
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11275304 4 -  35597290 at---gg
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11097801 4 +  39895921 at---gg
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16464586 4 -  44759192 at---gg
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21336167 4 + 157394656 at---ga
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135714520 4 - 157403528 CT---GA
i Capra_hircus.CM004562.1                               C 0 C 0
s Capromys_pilorides.CapPil_scaffold_1011243                 1125 4 +      1208 GT---GA
i Capromys_pilorides.CapPil_scaffold_1011243            C 0 C 0
s Castor_canadensis.CasCan_scaffold_1326                     1253 4 -    202837 GC---AA
i Castor_canadensis.CasCan_scaffold_1326                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15791495 4 -  24422027 gt---ga
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15803440 4 -  24440124 gt---ga
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       181612 4 +    436027 GT---GA
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18896774 4 -  29618158 GT---AA
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                13424 4 -     26817 GT---AA
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                17667 4 +     25043 GT---AA
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4370225 4 +   7569818 GT---GA
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_171732          382 4 +      8380 GT---GA
i Ceratotherium_simum_cottoni.CerCot_scaffold_171732    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6560669 4 +   6739814 gt---ga
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      32146 4 +     60454 GT---GA
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          7350 4 -     21101 GT---GA
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         64660 4 -    107033 GT---GA
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        7520 4 -     17608 GT---GA
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          4688 4 +     45019 GT---GA
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           4964 4 +     15177 GT---GA
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          7570 4 +     16677 GT---GA
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           29766 4 +     35983 GT---GA
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11996291 4 +  12117833 GT---GA
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46483273 4 +  46592721 GT---GA
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                       1384 4 -     27215 GT---GA
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       7584 4 +     35577 GT---GA
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        7378 4 -     25661 GT---GA
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        7550 4 -     17744 GT---GA
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        26919 4 +     37128 GT---GA
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           5937 4 -      6963 GT---GA
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 I 22
s Cheirogaleus_major.k141_1157592                           64465 4 -     68416 GT---GA
i Cheirogaleus_major.k141_1157592                       C 0 I 74
s Cheirogaleus_medius.k141_854352                             767 4 +     27737 GT---GA
i Cheirogaleus_medius.k141_854352                       C 0 I 74
s Cheracebus_lucifer.k141_619653                            10732 4 -     18223 GT---AA
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              2473 4 +    188999 GT---AA
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           46772 4 +     57117 GT---AA
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          51452 4 +     54541 GT---AA
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15966183 4 +  43084221 ca---ga
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         76253 4 +    196370 GT---AA
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          20434 4 +     40510 GT---AA
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15145104 4 -  15256731 GT---GA
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      39568 4 -     53260 GT---GA
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101150127 4 + 101219884 GT---GA
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                19965 2 -     21363 GT-----
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           765269 2 +    964067 GT-----
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_304221              2891 4 -      7053 GT---GA
i Chrysochloris_asiatica.ChrAsi_scaffold_304221         C 0 C 0
s Colobus_angolensis.KN985967.1                          10889898 4 +  10971483 GT---GG
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147667826 4 + 156195979 GT---GG
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            19809 4 +     23629 GT---GG
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         4639 2 -      5782 GT-----
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 284237 4 -    399297 GT---GA
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53036523 4 +  72327488 ga---gg
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              4109 4 -     22648 GT---GA
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            59622 4 -     70449 GT---GA
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 I 62
s Ctenodactylus_gundi.CteGun_scaffold_447                  216365 4 -    956709 AT---GA
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 37898 4 -     67205 GT---AA
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                22728 4 +     26546 GT---GA
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             63870 4 -    236241 GT---GA
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          186986 4 -   6883506 AT---GA
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16850412 4 +  31942871 CT---GA
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80042736 4 -  96802777 GT---GA
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18703181 4 -  18957592 gt---gA
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 328624 4 +    993696 GT---GA
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   9258 4 +    151128 GT---GA
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   161682 4 +    228994 GA---GA
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                42442 4 -     73477 GT---GA
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           23006886 4 -  44670279 GT---GA
i Echinops_telfairi.JH980316.1                          C 0 I 11
s Eidolon_helvum.KE772537.1                                 15342 4 +     24177 GT---GA
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1498731 4 +   1727528 at---ga
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7836677 4 +  15467074 GT---GA
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85879557 4 +  99434291 gt---ga
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4710941 4 +   6522550 gt---ga
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5858485 4 -   7175178 GT---GA
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13356971 4 +  41866177 GT---GA
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          18461 4 +     92910 GT---GA
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11543966 4 +  16010500 gt---ga
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48782137 4 -  48907691 GT---GA
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          320987 4 +    330699 GT---GA
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             67439 4 +     89355 GT---GA
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                             10529 4 +     13586 GT---GA
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_1015201                              3788 4 -      4292 GT---GA
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            16925 4 +     36558 GT---GA
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            13247 4 +     60246 GT---GA
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                16732 4 +    109717 GT---GA
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 4715 4 -     19505 GT---GA
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                21390 4 +     27497 GT---GA
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           23846 4 +     26808 GT---GA
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                38578 4 +     46535 GT---GA
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              21319 4 -     29447 GT---GA
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129901259 4 - 159252932 GT---GA
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129288236 4 - 158578461 GT---GA
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 29426 4 +     52776 GT---GA
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13899307 4 -  19261668 tt---ga
i Fukomys_damarensis.KN123630.1                         I 1150 I 43
s Galago_moholi.ctg555                                     216580 4 -    847004 GT---GA
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           18942 4 -     43889 GT---GA
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          16083 4 +     27357 GT---GA
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               160852 4 +    324696 GG---GA
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    188456 4 -    189561 GT---GA
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           17773 2 -     18683 G-----A
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                              10540 4 -     14630 GT---GA
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119657640 4 - 195582420 GT---GA
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   81075 4 +    118900 GT---GA
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         7321 4 +     10286 GT---GA
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             5802 4 -     11661 GT---GA
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                            11126 4 +     56096 GT---GA
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        34375 4 -     42470 GT---GA
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        51001 4 -     54384 GT---GA
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              24739 4 +     53719 GT---GA
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                35553 4 -     91191 AT---GA
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2563443 4 +  31725842 gt---ga
i Heterocephalus_glaber.JH602058.1                      I 1001 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               65032 4 +     73687 GT---GA
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              152810 4 +    277961 GT---GA
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      286279 4 -    477199 gg---ga
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959               3552 4 +     26078 GG---CA
i Hipposideros_galeritus.HipGal_scaffold_52959          C 0 C 0
s Hoolock_leuconedys.ctg79                                     10461 4 -   7690867 GT---GA
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 25175 4 -     67322 GT---GA
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 I 63
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           23099 4 -    119109 GT---GA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_1816750                             3031 4 +      3202 GT---GA
i Hylobates_abbotti.k141_1816750                        C 0 C 0
s Hylobates_agilis.k141_1136966                              1041 4 +      9785 GT---GA
i Hylobates_agilis.k141_1136966                         C 0 C 0
s Hylobates_klossii.k141_468230                              4521 4 +      5464 GT---GA
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14629867 4 -  25970782 GT---GA
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            2418 4 +      4161 GT---GA
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                    11368 4 +     22540 GT---GA
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7131638 4 +  13083262 gt---ga
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   2860 4 +      3484 GT---GA
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              14963 4 +     17520 GT---GA
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8580430 4 +  11848649 GT---GC
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               29583 4 +     37189 GT---GA
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          55293 4 -    147782 GT---AA
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    7492 4 +     26176 GT---GA
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258412679 4 - 285822530 GT---GA
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        30003 4 +     39228 GT---AA
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            59367 4 +     63517 GT---AA
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        37751 4 -     38897 GT---AA
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      3793 4 -     13103 GT---AA
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3093806 4 -   3498232 GT---GA
i Leptonychotes_weddellii.KB714749.1                    C 0 I 202
s Lepus_americanus.LepAme_scaffold_62849                    22279 4 +     22452 GT---GA
i Lepus_americanus.LepAme_scaffold_62849                C 0 I 62
s Lipotes_vexillifer.KE558548.1                            141891 4 +   3060487 GT---GA
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19253758 4 +  19376315 GT---GA
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           16545 4 +     84689 GT---GA
i Loris_lydekkerianus.k141_550999                       C 0 I 9
s Loris_tardigradus.ctg97                                 3784278 4 +   6799190 GT---GA
i Loris_tardigradus.ctg97                               C 0 I 9
s Loxodonta_africana.GL010040.1                          20600588 4 -  62548349 ga---ga
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11097257 4 +  39895028 at---gg
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             25507 4 +     74745 GT---GA
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12711970 4 +  12821369 GT---GA
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                4543 4 -     26467 GT---GA
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           52414 4 +     63263 GT---GA
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 4524 4 -     26361 GT---GA
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_2667654                                 827 4 -      5626 GT---GA
i Macaca_leonina.k141_2667654                           C 0 C 0
s Macaca_maura.k141_251854                                  50943 4 -     79256 GT---GA
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196041041 4 + 196197964 gt---ga
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11451211 4 +  11645122 gt---ga
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   9897 4 -     46448 GT---GA
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                7558 4 -     13212 GT---GA
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 21240 4 -     55006 GT---GA
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43846662 4 +  43892939 GT---GA
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               22524 4 -     24607 GT---GA
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               9894 4 -     27140 GT---GA
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                703958 4 +    802869 GT---GC
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43442927 4 -  43563597 GT---GA
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4455726 4 -   4543643 GT---GA
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            154241 4 +    252755 GT---GA
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             41839 4 +     58827 gt---ga
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36879504 4 +  64221397 at---ga
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       67760 4 -    234502 GT---GA
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             8652 4 -     87323 GT---GA
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 3459 4 +    115071 GT---GA
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1053097 4 -  26018355 ga---ga
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    4554 4 -     12939 GT---GA
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16515720 4 +  47401472 GT---GA
i Microcebus_murinus.CM007691.1                         C 0 I 74
s Microgale_talazaci.MicTal_scaffold_34660                  46777 4 -     48017 GT---AA
i Microgale_talazaci.MicTal_scaffold_34660              C 0 I 12
s Micronycteris_hirsuta.MicHir_scaffold_37978               26918 4 -     32043 GT---GA
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8215269 4 +  10048721 gt---ga
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            39728 4 +     45743 GT---GA
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         7476 4 +     29742 GT---GA
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        19205 4 -    104932 GT---GA
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 I 204
s Mirza_zaza.k141_593947                                     6415 4 -     12809 GT---GA
i Mirza_zaza.k141_593947                                C 0 I 74
s Monodon_monoceros.MonMon_M_scaffold_5598                 152329 4 +    154973 GT---GA
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                165427 4 +    265003 AT---GA
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  9129 4 -     19904 GT---GA
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  152468 4 -    168139 GT---GA
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          26260 4 -    100666 GT---GA
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70773339 4 +  92629107 gt---ga
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75495403 4 +  98207768 gt---ga
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67562130 4 +  89017189 gt---ga
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74338111 4 +  97876770 gt---ga
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             16346 4 +     98495 gt---ga
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 I 53
s Mustela_putorius.JH417978.1                             4430755 4 -  28371801 GT---GA
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     97827 4 -    117718 GT---GA
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 I 61
s Myotis_brandtii.KE161952.1                               973274 4 +   8389877 gg---ga
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5024350 4 +   6462685 gg---ga
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3470771 4 -   3747815 gg---ga
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        16008 4 +     66751 GG---GA
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_12795               385 2 -     87886 GT-----
i Myrmecophaga_tridactyla.MyrTri_scaffold_12795         C 0 C 0
s Nannospalax_galili.KL201303.1                            125810 4 +    362372 GT---GA
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                              11737 4 +     48152 GT---GG
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4492600 4 -  14209539 GT---GA
i Neomonachus_schauinslandi.NINY01007774.1              C 0 I 200
s Neophocaena_asiaeorientalis.KZ688543.1                  3956920 4 -   4490290 GT---GA
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  52736 4 +     94413 GT---GA
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_762468                            1539 4 -      2755 GT---GA
i Nomascus_annamensis.k141_762468                       C 0 C 0
s Nomascus_concolor.k141_256540                              8149 4 -      8966 GT---GA
i Nomascus_concolor.k141_256540                         C 0 C 0
s Nomascus_gabriellae.k141_1400361                           2089 4 -      2203 GT---GA
i Nomascus_gabriellae.k141_1400361                      I 8 n 4
s Nomascus_siki_b.tarseq_453                             7402 4 +     12787 gt---ga
i Nomascus_siki_b.tarseq_453                        C 0 I 134
s Nomascus_siki_a.k141_421408                                  2004 4 +     16235 GT---GA
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                40132 4 +   3668941 at---gg
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65573320 4 -  95554990 GT---GA
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_6040852                             956 4 +      1868 GT---GA
i Nycticebus_coucang.k141_6040852                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65681499 4 +  89412551 GT---GA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            5001337 4 -  23139505 gt---GA
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3692969 4 +  10294119 gt---ga
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             686836 4 -   3126709 GT---GA
i Odobenus_rosmarus.KB229369.1                          C 0 I 215
s Odocoileus_virginianus.KZ101650.1                       1086117 4 +   1425656 at---ga
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         44186 4 +     78940 GT---GA
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  44809 4 +     62360 GT---GA
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7230594 4 -   7562323 GT---GA
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_371885              1803 4 +      3658 GC---GA
i Orycteropus_afer.OryAfe_flattened_line_371885         C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141885295 4 + 163896628 GT---GA
i Oryctolagus_cuniculus.CM000803.1                      C 0 I 63
s Otocyon_megalotis.JAEUCK010005121.1                      317264 4 -    505867 at---gg
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        6441 4 -     53940 GT---GA
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18014406 4 -  38779656 GT---GA
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134085335 4 - 275406953 at---ga
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      86581 4 +    140051 AT---GA
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127579819 4 - 205426864 GT---GA
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120156979 4 - 196562556 GT---GA
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  42026 4 +    295523 GT---GA
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3645840 4 +  18214204 GT---GA
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5035477 4 -   6340057 GT---GA
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1074220 4 -   1292953 at---ga
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188161719 4 - 188283584 gt---ga
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              4809 4 +     25005 GT---GA
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47519091 4 +  47705337 GT---GA
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 73082 4 -    104429 GT---GA
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   11614 4 +     14967 GT---GA
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_899489                                   284 4 -     13896 GT---GA
i Papio_ursinus.k141_899489                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    123493 4 -    135482 GT---GA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 I 62
s Perodicticus_ibeanus.k141_117958                          12105 4 -     23713 GT---GA
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           13256 4 +     61070 GT---GA
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       3520 4 +     49596 GA---TA
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615458.1                       2840622 4 -   3366660 gt---ga
i Peromyscus_maniculatus.KI615458.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    19389 7 -     36578 gtggggt
i Petromus_typicus.PetTyp_scaffold_33007                I 153 I 47
s Phocoena_phocoena.PhoPho_flattened_line_53071              5057 4 +      8220 GT---GA
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Piliocolobus_badius.k141_1987485                           5277 4 -      5908 GT---GG
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       5896 4 -     17985 GT---GG
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            5263 4 +      7694 GT---GG
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26743746 4 +  26888534 GT---GG
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306           101504 4 +    112873 GT---GA
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990          11554 4 +     21690 GT---GA
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       27384 4 +     44506 GT---AA
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        27597 4 +     67491 GT---AA
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      17836 4 -     98129 GT---AA
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     27437 4 +    147771 GT---AA
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         4072 4 -     43940 GT---AA
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          8155 4 -     55515 GT---AA
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         27509 4 +    152463 GT---AA
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       5313 4 -    119457 GT---AA
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         17231 4 +    134592 GT---AA
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          27819 4 -     75465 GT---AA
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              192450 4 -    373494 GT---GA
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19813099 4 +  19899266 GT---GA
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               9019 4 -     15069 GT---GG
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              9134 4 +     14865 GT---GG
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                6139 4 -      9567 GT---GA
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6854055 4 +  12164890 GT---GA
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     22856 4 -     30946 GT---GA
i Propithecus_coquerelli.NW_012147863.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         9157 4 +     11805 GT---GA
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           48491 4 +     52369 GT---GA
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         40878 4 -     44753 GT---GA
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            22801 4 +     27322 GT---GA
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       22447 4 -     53241 GT---GA
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         44710 4 -     48185 GT---GA
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           40435 4 +     77221 gt---ga
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            8084 4 -     27784 gt---gA
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        252401 4 -    344369 GT---GA
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13249053 4 -  17261082 GT---GA
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             607003 4 -   3946241 GT---GA
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131542171 4 - 161321710 GT---GA
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             33125 4 +     56732 GT---GG
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6809622 4 +   6970761 GT---GG
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             9011 4 +     18040 GT---GG
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                22965 4 +     68503 AT---GA
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13920826 4 +  90463843 gt---ga
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1794885 4 +   2252614 GT---GA
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                            3390 4 -     17045 GT---GG
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206380877 4 - 206558726 gT---GG
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44859780 4 -  45163003 GT---GG
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                22397 4 +    109198 GT---GA
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                      3848 4 -      4338 AT---GA
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15677830 4 -  43202129 gt---aa
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        9744 4 +     34089 GT---AA
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              9683 4 -     60842 GT---AA
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              9777 4 +     67014 GT---AA
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              9754 4 +     60816 GT---AA
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 9691 4 -     76454 GT---AA
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17346462 4 -  30362882 GT---AA
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         25783 4 -     62485 GT---AA
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   41683 2 -    114521 AA-----
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        6626 4 +     15331 GT---GG
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      12001 4 +     20762 GT---GG
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         122005 4 +    130994 GT---GG
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           40785 4 +     46263 GT---GG
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     33930 4 +     42640 GT---GG
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        16952 4 +     30600 GT---GG
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  106986 4 -    120886 GT---AA
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            26325 4 +    739146 GT---GA
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17776655 4 -  27805282 gt---AA
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2245339 4 +   2842873 gt---ga
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             241170 4 -    276980 GT---GA
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            35369 4 +     62062 GT---GA
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189277358 4 + 218635234 at---ga
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Symphalangus_syndactylus.tarseq_24                        20126 4 -  13920577 GT---GA
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                4349 4 +     20549 AT---TA
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               18618 2 +     45698 GT-----
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      812957 4 +   1148477 GG---AA
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  63599 4 +     99546 GG---AA
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194013252 4 - 194193292 gt---ga
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                  1787 4 -      3104 GT---GA
i Tolypeutes_matacus.TolMat_scaffold_475685             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  140092 4 -    259118 GT---TA
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        30273 4 +     38948 GT---GG
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   23833 4 -     32910 GT---GG
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      5734 4 -     12939 GT---GG
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       5162 4 -     14244 GT---GG
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           46555 4 -     54611 GT---GG
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        4356 4 -     11566 GT---GG
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     6540 4 -     15592 GT---GG
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          5192 4 +     14371 GT---GG
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   3478 4 +     12481 GT---GG
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        3459 4 -     24393 GT---GG
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       8603 4 -     28054 GT---GG
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44663387 4 -  44834318 GT---GG
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       5699 4 +     13828 GT---GG
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                  11131 4 +     90398 GT---GA
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16091664 4 +  31416278 GT---GA
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2802387 4 -   3938065 gt---GA
i Tupaia_chinensis.KB320831.1                           C 0 I 13
s Tupaia_tana.TupTan_flattened_line_68454                   11211 4 +     13056 GT---GA
i Tupaia_tana.TupTan_flattened_line_68454               C 0 I 13
s Tursiops_truncatus.MRVK01000923.1                      69319324 4 -  96451834 GT---GA
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                    2045 2 +    136657 GT-----
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 I 53
s Ursus_maritimus.KK498671.1                              6522820 4 +  28682327 GT---GA
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                 10722 4 -     20643 GT---AA
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             30257 4 -     33872 GT---AA
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1530349 4 -   2331223 GT---GA
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                146491 4 -    281493 AT---GG
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       132835 4 -    134049 GT---GA
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        221697 4 -    227762 GT---GA
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 I 214
s Zapus_hudsonius.ZapHud_scaffold_202118                     2426 4 -      3360 GT---GC
i Zapus_hudsonius.ZapHud_scaffold_202118                C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            3917 4 -     13665 GT---GA
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Dipodomys_stephensi.DipSte_scaffold_84338                  3898 0 -     11986 C
e Dipodomys_ordii.KN672545.1                              3661524 0 +   4240102 C
e Condylura_cristata.JH655880.1                          60624216 0 +  78930452 C
e Catagonus_wagneri.CatWag_scaffold_1305                   164981 0 -    276539 C
e Carollia_perspicillata.CarPer_scaffold_4436               63963 0 +     67245 C
e Hylobates_pileatus_a.tarseq_592                             37267 2881 -     60944 I
e Microtus_ochrogaster.CM001673.1                        22826066 0 -  98408828 C
e Tarsius_wallacei.k141_48636                               64696 0 +     65473 C
e Tarsius_lariang.k141_609102                               31387 0 +     42269 C
e Pithecia_vanzolinii.k141_831006                           15424 0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514 0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521 0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292 0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093 0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038 0 +     78826 C
e Pithecia_albicans.k141_991845                             45662 0 -     61926 C
e Ondatra_zibethicus.OndZib_scaffold_6821                  131872 0 +    145789 C
e Ellobius_talpinus.LOJH01076532.1                           1582 0 +      9159 C
e Ellobius_lutescens.LOEQ01003611.1                        245230 0 -    369425 C
e Cephalopachus_bancanus.k141_702587                        12545 0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530 0 +    345090 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               18845 130 +    209709 GAAT---AAA-GATACAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAACTTTT-C----TTC--TAGAGACAAGTTG-------TAGT-TGTGT-A-TATAGAGTGtgaatag----------TGTCCA-T-ATTT-T-ACTG----TCAT----TAT---TT
s Acinonyx_jubatus.LLWD01000356.1                         2041690  61 +   3721120 GAAT---AAA-GATGTAGCT-TAT-TAGCA-----C-------------CTTA-TTT-T----GTGGATCAGACCTGCAAAA-T-T-AAATCTC---------------------------------------------------------------------------------------------------------------
i Acinonyx_jubatus.LLWD01000356.1                       C 0 I 69
s Acomys_cahirinus.AcoCah_scaffold_1625                    119337 138 -    189883 AAAT---AAA-CATGCAGCT-TAT-TAACA-----C-------------CTCA-TTT-T----GTACATGAGACCTGAAAAT-T-T-AAACCTTC-A----TTA--TAAGGACAAAGTGG-AA-T-TAGT-TGGTT-T-TGTAGAGTGTGAATTA---AT--A-GAGTCCA-T-ATTT-T-ACTC----TAAT----GAC---TT
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10665583 102 +  23371972 --------------------------------------------------TTA-TTT-T----GTGAATTGGACCTGCAAAA-T-T-AAACCTTT-C----T----TAGGGATAAACTGA-CG-T-TAGT-TATGT-A-TATGGAGTGTAAATTG---AT--A-GTGTCCA-T-ATTT-T-CCTC----T---------------
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 25 I 4
s Ailurus_fulgens.LNAC01000003.1                          7102506 128 -  16596857 GAAT---AAA-GATGTAGCT-TAT-TAGCA-----C-------------CTTA-TTT-T----GTGAATTGGACCTGCACAA-T-T-AAACCTTT-C----T----TAGGAACAAATTGA-AG-T-TAGT-TGTGT-A-TATGGAGTGTAAATTG-ACA-G----TGTCCA-T-ATTT-T-CCTC----T---------------
i Ailurus_fulgens.LNAC01000003.1                        C 0 I 4
s Allactaga_bullata.AllBul_scaffold_141108                   2683 138 -      7259 AAAG---TAA-GTGATAGCT-AAT-TAGCA-----C-------------TTCA-TAT-T----GTGGATGAGACCTGAAAAA-G-T-AAGCCTTT-C----ATG--TAGGGACAAATTGG-AG-T-GAAA-TGTGT-A-TGTGGAGTGTAAATTG---AT--A-GTGTTCA-T-AATT-T-ACTC----TAAT----GAT---TT
i Allactaga_bullata.AllBul_scaffold_141108              C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   6733 138 -     60446 GAAT---AAA-GATACAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAATCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--A-GTATCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         7447 138 -     29318 GAAT---AAA-GATACAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAATCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGCGAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         6385 138 +     38766 GAAT---AAA-GATACAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAATCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGCGAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          7343 138 -     80423 GAAT---AAA-GATACAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAATCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGCGAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              2291 135 +     19852 GAAT---AAA-GATATAGCT-TAT-TAACA-----C-------------ATCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAATCTGT-C----TTC--TAGAGACAAGTTG--GGAT-TAAT-TGTGT-A-TATAGAGTATTAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TTTT----TA------
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                4511 131 -     12443 GAAT---AAA-GATATAGCT-TAT-TAACA-----C-------------ATCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAATCTGT-C----TTC--TAGAGACAAGTTG--GGAT-TAGT-TGTGT-A-TATAGAGTATTAATAG----------TGTCCA-T-ATTT-T-ACTC----TTAT----TA------
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                             1834 135 +      5070 GAAT---AAA-GATATAGCT-TAT-TAACA-----C-------------ATCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAATCTGT-C----TTC--TAGAGACAAGTTG--GGAT-TAAT-TGTGT-A-TATAGAGTATTAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TTTT----TA------
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_799181                                 1581  60 -      1641 GAAT---AAA-GATATAGCT-TAT-TAACA-----C-------------ATCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAATCT----------------------------------------------------------------------------------------------------------------
i Alouatta_juara.k141_799181                            C 0 N 0
s Alouatta_macconnelli.k141_2318944                          4320 131 -     24210 GAAT---AAA-GATATAGCT-TAT-TAACA-----C-------------ATCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAATCTGT-C----TTC--TAGAGACAAGTTG--GGAT-TAGT-TGTGT-A-TATAGAGTATTAAT-----A-G----TGTCCA-T-ATTT-T-ACTC----TTAT----TA------
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_494922                              824 131 -      8325 GAAT---AAA-GATATAGCT-TAT-TAACA-----C-------------ATCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAATCTGT-C----TTC--TAGAGACAAGTTG--GGAT-TAGT-TGTGT-A-TATAGAGTATTAAT-----A-G----TGTCCA-T-ATTT-T-ACTC----TTAT----TA------
i Alouatta_nigerrima.k141_494922                        C 0 C 0
s Alouatta_palliata.k141_405616                              6738  79 +     16794 GAAT---AAA-GATATAGAT-TAT-TAACA-----C-------------ATCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAATCTGT-C----TTC--TAGAGACAAGTTG--------------------------------------------------------------------------------------
i Alouatta_palliata.k141_405616                         C 0 I 48
s Alouatta_puruensis.k141_347198                              767 135 +      9111 GAAT---AAA-GATATAGCT-TAT-TAACA-----C-------------ATCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAATCTGT-C----TTC--TAGAGACAACTTG--GGAT-TAAT-TGTGT-A-TATAGAGTATTAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TTAT----TA------
i Alouatta_puruensis.k141_347198                        C 0 C 0
s Alouatta_seniculus.k141_790278                             6015 135 -      9835 GAAT---AAA-GATATAGCT-TAT-TAACA-----C-------------ATCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAATCTAT-C----TTC--TAGAGACAACTTG--GGAT-TAAT-TGTGT-A-TAGAGAGTATTAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TTAT----TA------
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3528738  90 +   4113121 gaat---aaa-tatgaAGCT-AGT-TAACA-----C-------------TTTG-TTT-T----GTGGACTGGACCTGCAAAA-T-T-AAAGCTTT-C----TTC--TAGAGACAGATTTA-AG-T-TAGT-TGT-----------------------------------------------------------------------
i Ammotragus_lervia.NIVO01013474.1                      C 0 I 37
s Anoura_caudifer.AnoCau_scaffold_422                      394678 138 -    631301 GAAT---AAG-GATGTAGTT-TAT-TACCA-----C-------------CTCA-CTT-T----GTGGATTGTACCTGCAAAA-C-T-AAACCTTT-C----TTT--TAGGGACAAATTGA-AG-T-TAGT-TGTAT-A-TTTGGAGGGTAAATTG-----GTA-GTGTCTG-T-ATTT-T-ACTC----TAAT----TAT---TT
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             5966  91 +     55446 GAAT---AAA-TATGTAGCT-AGTTTAACA-----C-------------CTTG-TTT-T----GTGGACTGGACCTGCAAAG-T-T-AAAGCTTT-C----TTC--TAGAGACAGATTTA-AG-T-TAGT-TGT-----------------------------------------------------------------------
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 I 37
s Aotus_azarae.k141_3170768                                 67625 131 +     78111 GAAT---AAA-GATATAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGCTGAGACCTGAAAAA-T-T-AAATCTTT-C----TTC--TAGAGACAAGTTG--GGAT-TAGT-TGTGT-A-TATAGAGTATGAATAG----------TGTCCA-T-ATTT-T-ACTC----TTAT----TA------
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                           10566 131 +     22701 GAAT---AAA-GATATACCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAATCTTT-C----TTC--TAGAGACAAGTTG--GGAT-TAGT-TGTGT-A-TATAGAGTATGAATAG----------TGTCCA-T-ATTT-T-ACTC----TTAT----TA------
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5754535 131 +   9889416 GAAT---AAA-GATATAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGAcctgaaaaa-t-t-aaatcttt-c----ttC--TAGAGACAAGTTG--GGAT-TAGT-TGTGT-A-TATAGAGTATGAATAG----------TGTCCA-T-ATTT-T-ACTC----TTAT----TA------
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                            11114 131 -    104377 GAAT---AAA-GATATAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAATCTTT-C----TTC--TAGAGACAAGTTG--GGAT-TAGT-TGTGT-A-TATAGAGTATGAATAG----------TGTCCA-T-ATTT-T-ACTC----TTAT----TA------
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                              11143 131 +     23246 GAAT---AAA-GATATAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAATCTTT-C----TTC--TAGAGACAAGTTG--GGAT-TAGT-TGTGT-A-TATAGAGTATGAATAG----------TGTCCA-T-ATTT-T-ACTC----TTAT----TA------
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     3761 120 +     11424 GAAT---AAT-TATGCAGCT-TAA-TGACA-----C-------------TTCC-T-T-T----GTGGATGAGACCTGCAAAA-T-T-AAAAT-TC-T----TTT--TGGGGACAAATTGT-AT-T-TAG----TGT-A-TATGGAGTGTG--------AT-T--GTGTCCA-T-ATTT-T-ACTC----T---------------
i Aplodontia_rufa.AprRuf_scaffold_101456                I 4 I 4
s Arctocebus_calabarensis.k141_587554                        7728 112 +      9265 GGGT---AAA-AAT-------TAT-TAACA-----C-------------CTCA-TTG-T----GTTTATAATACCTGCAAAA-T-T-AAACTTTA-C----TTC--TAGGGACAAAATGG-AG-T-TAGC-TGTGT-A-TCTGGAGTGCGA-------AT--A-GTGTCTA-T-AC-----------------------------
i Arctocebus_calabarensis.k141_587554                   C 0 I 3
s Artibeus_jamaicensis.ArtJam_scaffold_41619                12975 138 -     29036 GAAT---AAG-GATATAGTT-TAT-TAACA-----C-------------CTCA-TTT-T----GTGGATTGTACCTGCAAAA-T-T-AAACCTTT-C----TTT--TAGAGACAAATTGA-AG-T-TGGT-TGTAT-A-TTTGGAGGGTAAATTG-----GTA-GTGCCTG-T-ATTT-T-ACTC----TAAT----TAT---TT
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9544425 135 +  39197703 GAAT---AAA-GATATAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAATCTGT-C----TTC--TAGAGACAAGTTG--GGAT-TAGT-TGTGT-A-TATAGAGTATTAATAG---A-G-A-GTGTCCA-T-ATTT-T-ACTC----TTAT----TA------
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             65699 135 +     85812 GAAT---AAA-GATATAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAATCTGT-C----TTC--TAGATACAAGTTG--GGAT-TAGT-TGTGT-A-TATAGAGTATTAATAG---A-G-A-GTGTCCA-T-ATTT-T-ACTC----TTAT----TA------
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                16709 135 +     89302 GAAT---AAA-GATATAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAATCTGT-C----TTC--TAGATACAAGTTG--GGAT-TAGT-TGTGT-A-TATAGAGTATTAATAG---A-G-A-GTGTCCA-T-ATTT-T-ACTC----TTAT----TA------
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             21213 135 -     58268 GAAT---AAA-GATATAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAATCTGT-C----TTC--TAGAGACAAGTTG--GGAT-TAGT-TGTGT-A-TATAGAGTATTAATAG---A-G-A-GTGTCCA-T-ATTT-T-ACTC----TTAT----TA------
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             69207 135 +    119057 GAAT---AAA-GATATAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAATCTGT-C----TTC--TAGATACAAGTTG--GGAT-TAGT-TGTGT-A-TATAGAGTATTAATAG---A-G-A-GTGTCCA-T-ATTT-T-ACTC----TTAT----TA------
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              11176 135 -     25888 GAAT---AAA-GATATAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-C-T-AAATCTGT-C----TTC--TAGAGACAAGTTG--GGAT-TAGT-TGTGT-A-TATAGAGTATTAATAG---A-G-A-GTGTCCA-T-ATTT-T-ACTC----TTAT----TA------
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                12253 138 -     16375 GAAT---AAA-GTTGTAGCT-CAT-TAACA-----C-------------CTCA-TTT-T----GTGGATGAAACTTGCAAAA-T-T-AAACCTTT-C----TTC--TAGGGACAAAGTGG-AG-T-TAGC-TGTGT-A-TACGGAGTGCGAATAG---AT--A-GTGCCCA-T-ATTT-T-ACTC----TAAA----TAT---TT
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               5869 138 +      6337 GAAT---AAA-GTTGTAGCT-CAT-TAACA-----C-------------CTCA-TTT-T----GTGGATGAAACTTGCAAAA-T-T-AAACCTTT-C----TTC--TAGGGACAAAGTGG-AG-T-TAGC-TGTGT-A-TACGGAGTGCGAATAG---AT--A-GTGCCCA-T-ATTT-T-ACTC----TAAA----TAT---TT
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26386148 125 +  51448160 TAAT---AAA-GATGTAGCT-TAT-TAACA-----C-------------CTTG-TTT-T----GTGGATTGGACGTGCAAAA-T-T-AAAGCTTT-C----TTC--CAGGGACAAATTGA-AG-T-TGGT-TGTGT-A-TATGGGGTGTAAATGA---AT--A-GTGTCCA-T-CTAA-C-------------------------
i Balaenoptera_acutorostrata.KI537095.1                 C 0 I 9
s Balaenoptera_bonaerensis.DF502048.1                       11321 125 -     13118 GAAT---AAA-GATGTAGCT-TAT-TAACA-----C-------------CTTG-TTT-T----GTGGATTGGACGTGCAAAA-T-T-AAAGCTTT-C----TTC--CAGGGACAAATTGA-AG-T-TGGT-TGTGT-A-TATGGGGTGTAAATGA---AT--A-GTGTCCa-t-ctaa-t-------------------------
i Balaenoptera_bonaerensis.DF502048.1                   C 0 I 9
s Beatragus_hunteri.BeaHun_scaffold_21644                   50941  90 -     72089 GAAT---AAA-TATGAAGCT-AGT-TAACA-----C-------------TTTG-TTT-T----GTGGACTGGACCTGCAAAA-T-T-AAAGCTTT-C----TTC--TAGAGACAGATTTA-AG-T-TAGT-TGT-----------------------------------------------------------------------
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 I 33
s Bison_bison.KN264915.1                                   305662  90 -   6870073 gaat---aaa-catGAAGCT-AGT-TAACA-----C-------------TTTG-TTT-T----GTGGACTGGACCTGCAAAA-T-T-AAAGCTTT-C----TTC--TAGAGACAGATTTA-AG-T-TAGT-TGC-----------------------------------------------------------------------
i Bison_bison.KN264915.1                                C 0 I 37
s Bos_indicus.CM003021.1                                 22959768  90 + 161108492 gaat---aaa-tatgAAGCT-AGT-TAACA-----C-------------TTTG-TTT-T----GTGGACTAGACCTGCAAAA-T-T-AAAGCTTT-C----TTC--TAGAGACAGATTTA-AG-T-TAGT-TGC-----------------------------------------------------------------------
i Bos_indicus.CM003021.1                                C 0 I 37
s Bos_mutus.JH883513.1                                     421947  90 +    998990 gaat---aaa-tatgAAGCT-AGT-TAACA-----C-------------TTTG-TTT-T----GTGGACTAGACCTGCAAAA-T-T-AAAGCTTT-C----TTC--TAGAGACAGATTTA-AG-T-TAGT-TGC-----------------------------------------------------------------------
i Bos_mutus.JH883513.1                                  C 0 I 37
s Bos_taurus.CM000177.6                                  22668420  90 + 158972876 gaat---aaa-tatgAAGCT-AGT-TAACA-----C-------------TTTG-TTT-T----GTGGACTAGACCTGCAAAA-T-T-AAAGCTTT-C----TTC--TAGAGACAGATTTA-AG-T-TAGT-TGC-----------------------------------------------------------------------
i Bos_taurus.CM000177.6                                 C 0 I 37
s Bubalus_bubalis.KI419065.1                               677284  90 +   1914593 gaat---aaa-tacgAAGCT-AGT-TAACA-----C-------------TTTG-TTT-T----GTGGACTGGACCTACAAAA-T-T-AAATCTTT-C----TTC--TAGAGACAGATTTA-AG-T-TAGT-TGC-----------------------------------------------------------------------
i Bubalus_bubalis.KI419065.1                            C 0 I 37
s Cacajao_ayresi.k141_724503                               119045 130 -    171031 GACT---AAA-GATATAGCT--AT-TAACA-----C-------------TTCA-TTT-T----GCAGATGAAACCTCAAAAA-T-T-AAACCTTC-C----TTC--TAGAGACAAATTGG-AG-T-TAGT-TGTGT-A-TATAGAGTATGA-------AT--A-GTGTCCA-T-ATTT-T-ACTC----TTAT----TA------
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 18065 130 +    125063 GACT---AAA-GATATAGCT--AT-TAACA-----C-------------TTCA-TTT-T----GCGGATGAAACCTCAAAAA-T-T-AAACCTTC-C----TTC--TAGAGACAAATTGG-AG-T-TAGT-TGTGT-A-TATAGAGTATGA-------AT--A-GTGTCCA-T-ATTT-T-ACTC----TTAT----TA------
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                20112 130 -    216513 GACT---AAA-GATATAGCT--AT-TAACA-----C-------------TTCA-TTT-T----GCAGATGAAACCTCAAAAA-T-T-AAACCTTC-C----TTC--TAGAGACAAATTGG-AG-T-TAGT-TGTGT-A-TATAGAGTATGA-------AT--A-GTGTCCA-T-ATTT-T-ACTC----TTAT----TA------
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       12655 130 -    134917 GACT---AAA-GATATAGCT--AT-TAACA-----C-------------TTCA-TTT-T----GCAGATGAAACCTCAAAAA-T-T-AAACCTTC-C----TTC--TAGAGACAAATTGG-AG-T-TAGT-TGTGT-A-TATAGAGTATGA-------AT--A-GTGTCCA-T-ATTT-T-ACTC----TTAT----TA------
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3225245 137 -   8989139 GAAT---AAA-GATGTAGT--TAT-TAACA-----C-------------CTTG-TTT-T----GTGGACTGCGCCTGCAAAA-T-T-AAAGCTTT-C----TTC--TAGGGACAAATTGA-AG-T-TAGT-TGTGT-G-TATGGAGTGTAAATTGTACA------TGTCTA-T-ATTT-T-ACTC----taat----tat---tt
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           402945 137 -  15254737 GAAT---AAA-GATGTAGC--TAT-TAACA-----C-------------CTTG-TTT-T----GTGGACTGCACCTGCAAAA-T-T-AAAGCTTT-C----TTC--TAGGGACAAATTGA-AG-T-TAGT-TGTGT-G-TATGGAGTGTAAATTGTACA------TGTCTA-T-ATTT-T-ACTC----taat----tat---tt
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2978683 137 +   6889770 GAAT---AAA-GATGTAGT--TAT-TAACA-----C-------------CTTG-TTT-T----GTGGACTGCGCCTGCAAAA-T-T-AAAGCTTT-C----TTC--TAGGGACAAATTGA-AG-T-TAGT-TGTGT-G-TATGGAGTGTAAATTGTACA------TGTCTA-T-ATTT-T-ACTC----taat----tat---tt
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11528411 128 +  39901454 GAAT---AGA-GATGTAGC--TAT-TAGCA-----G-------------TTTA-TTT-T----GTGAATTGGACCTGCAAAA-T-TTAAACCTTT-C----T----TAGGAACAAGATGA-AG-T-TAGT-TGTGT-A-TATGGAGTGTAAATTG-ACA-G----TGTCCA-T-ATTT-T-CCTC----T---------------
i CanFam4.chr31                                         C 0 I 4
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   23385 128 +     87036 GAAT---AGA-GATGTAGC--TAT-TAGCA-----G-------------TTTA-TTT-T----GTGAATTGGACCTGCAAAA-T-TTAAACCTTT-C----T----TAGGAACAAGATGA-AG-T-TAGT-TGTGT-A-TATGGAGTGTAAATTG-ACA-G----TGTCCA-T-ATTT-T-CCTC----T---------------
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 I 4
s Canis_lupus_dingo.QKWQ01001993.1                       11275308 128 -  35597290 gaat---aga-gATGTAGC--TAT-TAGCA-----G-------------TTTA-TTT-T----GTGAATTGGACCTGCAAAA-T-TTAAACCTTT-C----T----TAGGAACAAGATGA-AG-T-TAGT-TGTGT-A-TATGGAGTGTAAATTG-ACA-G----TGTCCA-T-ATTT-T-CCTC----T---------------
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 I 4
s Canis_lupus_familiaris.chr31                           11097805 129 +  39895921 gaat---aaa-gatGTAGC-TTAT-TAGCA-----G-------------TTTA-TTT-T----GTGAATTGGACCTGCAAAA-T-TTAAACCTTT-C----T----TAGGAACAAGATGA-AG-T-TAGT-TGTGT-A-TATGGAGTGTAAATTG-ACA-G----TGTCCA-T-ATTT-T-CCTC----T---------------
i Canis_lupus_familiaris.chr31                          C 0 I 4
s Canis_lupus_orion.HG994411.1                           16464590 128 -  44759192 gaat---aga-gATGTAGC--TAT-TAGCA-----G-------------TTTA-TTT-T----GTGAATTGGACCTGCAAAA-T-TTAAACCTTT-C----T----TAGGAACAAGATGA-AG-T-TAGT-TGTGT-A-TATGGAGTGTAAATTG-ACA-G----TGTCCA-T-ATTT-T-CCTC----T---------------
i Canis_lupus_orion.HG994411.1                          C 0 I 4
s Capra_aegagrus.CM003214.1                              21336171  90 + 157394656 gaat---aaa-tatgaAGCT-AGT-TAACA-----C-------------TTTG-TTT-T----GTGGACTGGACCTGCAAAA-T-T-AAAGCTTT-C----TTC--TAGAGACAGATTTA-AG-T-TAGT-TAT-----------------------------------------------------------------------
i Capra_aegagrus.CM003214.1                             C 0 I 37
s Capra_hircus.CM004562.1                               135714524  90 - 157403528 GAAT---AAA-TATGAAGCT-AGT-TAACA-----C-------------TTTG-TTT-T----GTGGACTGGACCTGCAAAA-T-T-AAAGCTTT-C----TTC--TAGAGACAGATTTA-AG-T-TAGT-TAT-----------------------------------------------------------------------
i Capra_hircus.CM004562.1                               C 0 I 37
s Capromys_pilorides.CapPil_scaffold_1011243                 1129  61 +      1208 AAAT---AAA-AATGTAACT-TAT-TAAGA-----A-------------CACA-T-T-T----GTGTGTGAGACTCTTGAAA-T-C-AAATGTTT--------------------------------------------------------------------------------------------------------------
i Capromys_pilorides.CapPil_scaffold_1011243            C 0 N 0
s Carollia_perspicillata.CarPer_scaffold_4436               63963 130 +     67245 GAAT---AAG-GATGTAGTT-TAT-TAATA-----C-------------CTCA-TTT-T----GTAGATTGTACCTGCAAAA-T-T-AAACCTTT-C----TTT--TAGGGACAAATTGA-AG-T-TGAT-TGTAT-A-TTTGGAGGGTAAATTG-----GTA-GTGTTTG-T-ATTT-T-ACTC----T---------------
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 I 4
s Castor_canadensis.CasCan_scaffold_1326                     1257 130 -    202837 GAAT---AAA-GATATAACT-TAT-TAAGA-----C-------------CTGA-TTA-T----ATAGGTGAGACCAACAAAA-T-T-AAGCCTTG-T----TTA--TAGGGACAAATTTC-AG-T-TAGT-TGTAT-G-TATGGAGTGTGAATTG---AT--A-GCATCCA-T-TATT-T-ACTC----T---------------
i Castor_canadensis.CasCan_scaffold_1326                C 0 I 4
s Catagonus_wagneri.CatWag_scaffold_1305                   164981 123 -    276539 -TAT---TAA-GATGTAGCT-TAT-TAGCA-----C-------------CTTG-TTT-T----GTGAACCGGACCTGCCAA--T-T-CAAATTTT-C----TTC--CAGGGACAAAT--A-AG-T-TAGC-TCT---A-CACAGAGAATAAAGTG---AT--A-GTGTCCA-T-GTTT-T-ACCC--------------------
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 I 5
s Cavia_aperea.AVPZ01000278.1                            15791499 134 -  24422027 aaat---aaa-gatgTAACT-TAT-TAGAA-----A-------------CTCA-TTT-T----ATGAATGAGACCTCCAAAA-T-C-AAAT-----C----TTT--TAGGGACAAAGTGG-AG-T-TAGT-TGTAT-A-CTTGGAGCATAAGTTG---AT-TA--TGTCCa-t-attt-t-attc----taat----tat---tt
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15803444 134 -  24440124 aaat---aaa-gatgTAACT-TAT-TAGAA-----A-------------CTCA-TTT-T----ATGAATGAGACCTCCAAAA-T-C-AAAT-----C----TTT--TAGGGACAAAGTGG-AG-T-TAGT-TGTAT-A-CTTGGAGCATAAGTTG---AT-TA--TGTCCa-t-attt-t-attc----taat----tat---tt
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       181616 134 +    436027 AAAT---AAA-GATGTAACT-TAT-TAGAA-----A-------------CTCA-TTT-T----ATGAATGAGACCTCCAAAA-T-C-AAAT-----C----TTT--TAGGGACAAAGTGG-AG-T-TAGT-TGTAT-A-CTTGGAGCATAAGTTG---AT-TA--TGTCCA-T-ATTT-T-ATTC----TAAT----TAT---TT
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18896778 131 -  29618158 GAAT---AAA-GATATAGCT-TAT-TAACA-----C-------------CTCA-TTT-T----GTGGATGAGACCTGAAAAA-A-T-AAATCTTT-C----TTC--TAGAGACAAGTTG--GGAT-TAGT-TGTGC-A-TATAGAGTATGAATAG----------TGTCCA-T-ATTT-T-ACTC----TTAC----TA------
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                13428 131 -     26817 GAAT---AAA-GATATAGCT-TAT-TAACA-----C-------------CTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAATCTTT-C----TTC--TAGAGACAAGTTG--GGAT-TAGT-TGTGC-A-TATAGAGTATGAATAG----------TGTCCA-T-ATTT-T-ACTC----TTAC----TA------
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                17671 131 +     25043 GAAT---AAA-GATATAGCT-TAT-TAACA-----C-------------CTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAATCTTT-C----TTC--TAGAGACAAGTTG--GGAT-TAGT-TGTGC-A-TATAGAGTATGAATAG----------TGTCCA-T-ATTT-T-ACTC----TTAC----TA------
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4370229 138 +   7569818 GACT---AAA-GATGTAGCT-CAT-TAACA-----C-------------CTCA-TTT-T----GTGGATTGGACCTGCAAAA-C-T-AAACCCTT-T----TTC--TAGCGATGAATTGA-AG-T-TAGC-TGTGT-A-TATGGAGTGTAAATTG---AT--A-GTGTCCA-T-ATTT-T-ACTc----taat----tgt---tt
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_171732          386 138 +      8380 GACT---AAA-GATGTAGCT-CAT-TAACA-----C-------------CTCA-TTT-T----GTGGATTGGACCTGCAAAA-C-T-AAACCCTT-T----TTC--TAGCGATGAATTGA-AG-T-TAGC-TGTGT-A-TATGGAGTGTAAATTG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TAAT----TGT---TT
i Ceratotherium_simum_cottoni.CerCot_scaffold_171732    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6560673 138 +   6739814 gaat---aaa-GATGCAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATAAGACCTgaaaaa-t-t-aaaccttt-c----ttc--taGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      32150 138 +     60454 GAAT---AAA-GATGCAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATAAGACCTGAAAAA-T-T-AAACCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          7354 138 -     21101 GAAT---AAA-GATGCAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATAAGACCTGAAAAA-T-T-AAACCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         64664 138 -    107033 GAAT---AAA-GATGCAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATAAGACCTGAAAAA-T-T-AAACCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        7524 138 -     17608 GAAT---AAA-GATACAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAATCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--A-GTGTCAA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          4692 138 +     45019 GAAT---AAA-GATACAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAATCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           4968 138 +     15177 GAAT---AAA-GATACAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGTATGAGACCTGAAAAA-T-T-AAATCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TACAGAGTGTGAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          7574 138 +     16677 GAAT---AAA-GATACAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGTATGAGACCTGAAAAA-T-T-AAATCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TACAGAGTGTGAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           29770 138 +     35983 GAAT---AAA-GATACAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAATCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TACAGAGTGTGAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTT----TCAT----TAT---TT
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11996295 138 +  12117833 GAAT---AAA-GATACAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAATCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46483277 138 +  46592721 GAAT---AAA-GATACAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAATCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG-ACA-G----TGTCAA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                       1388 138 -     27215 GAAT---AAA-GATACAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGTATGAGACCTGAAAAA-T-T-AAATCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TACAGAGTGTGAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       7588 138 +     35577 GAAT---AAA-GATACAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAATCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        7382 138 -     25661 GAAT---AAA-GATACAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAATCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        7554 138 -     17744 GAAT---AAA-GATACAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGTATGAGACCTGAAAAA-T-T-AAATCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TACAGAGTGTGAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        26923 138 +     37128 GAAT---AAA-GATACAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGTATGAGACCTGAAAAA-T-T-AAATCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TACAGAGTGTGAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           5963 108 -      6963 --------------------------------------------------TCA-TTT-T----GTGGATGAGATCTGCAAAA-T-T-AAGCCTTT-C----TTC--TTGGGACA-ACTGG-AG-T-CAGT-TATGT-T-TATGGAGTGTGAACTG---AT--A-GTGTACA-T-AGTT-T-ACTC----TGA-------T---TT
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      I 22 C 0
s Cheirogaleus_major.k141_1157592                           64543  64 -     68416 ------------------------------------------------------------------------------------------------------------------AAGTGG-TG-T-TAGC-TGTGT-A-TATAGAGTATGAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TAAA----TAT---TT
i Cheirogaleus_major.k141_1157592                       I 74 C 0
s Cheirogaleus_medius.k141_854352                             845  64 +     27737 ------------------------------------------------------------------------------------------------------------------AAGTGA-TG-T-TAGC-TATGT-A-TATAGAGTGCAAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TAAA----TAT---TT
i Cheirogaleus_medius.k141_854352                       I 74 C 0
s Cheracebus_lucifer.k141_619653                            10736 131 -     18223 GAAT---AAA-GATATAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTCAAAAA-T-T-AAACCATT-T----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTTT-A-TATAGAGTATGA-------AT--A-GTGTCCA-T-ATTT-T-ACTC----TTAT----TA------
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              2477 131 +    188999 GAAT---AAA-GATATAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTCAAAAA-T-T-AAACCATT-T----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTTT-A-TATAGAGTATGA-------AT--A-GTGTCCA-T-ATTT-T-GCTC----TTAT----TA------
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           46776 131 +     57117 GAAT---AAA-GATATAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTCAAAAA-T-T-AAACCATT-T----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTTT-A-TATAGAGTATGA-------AT--A-GTGTCCA-T-ATTT-T-ACTC----TTAT----TA------
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          51456 131 +     54541 GAAT---AAA-GATATAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTCAAAAA-T-T-AAACCATT-T----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTTT-A-TATAGAGTATGA-------AT--A-GTGTCCA-T-ATTT-T-ACTC----TTAT----TA------
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15966187 137 +  43084221 aaat---gat-gatAGAACT-TAT-TAAGA-----A-------------CTCA-TTT-T----GAGAATGAGGCTTC-GAAA-T-C-AAATCTTT-C----TTC--TAGGGACAAACTGG-AA-T-TAGT-TGTAT-G-TATGGAGTGTGAATTG------attatgttca-t-attt-t-attc----taat----tat---tt
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         76257 130 +    196370 GACT---AAA-GATATAGCT--AT-TAACA-----C-------------TTCA-TTT-T----GCGGATGAGACCTCAAAAA-T-T-AAACCTTC-C----TTC--TAGAGACAAGTTGG-AG-T-TAGG-TGTGT-A-TATAGAGTATGA-------AT--A-GTGTCCA-T-ATTT-T-ACTC----TTAT----TA------
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          20438 130 +     40510 GACT---AAA-GATATAGCT--AT-TAACA-----C-------------TTCA-TTT-T----GCGGATGAGACCTCAAAAA-T-T-AAACCTTC-C----TTC--TAGAGACAAGTTGG-AG-T-TAGG-TGTGT-A-TATAGAGTATGA-------AT--A-GTGTCCA-T-ATTT-T-ACTC----TTAT----TA------
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15145108 138 -  15256731 GAAT---AAA-GATACAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAATCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      39572 138 -     53260 GAAT---AAA-GATACAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAATCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101150131 138 + 101219884 GACT---AAA-GATACAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAATCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                19967 124 -     21363 --------------GTAGCT-TAT-TAACA-----C-------------CTCT-TTT-T----GTGGATGAGATCTGCAAAA-T-T-AAACCTTT-C----TTC--TTGGGACAAATTGG-AG-T-CAGT-TTTGT-A-CATGGAGTGTGAATTG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TGA-------T----T
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           765271 124 +    964067 --------------GTAGCT-TAT-TAACA-----C-------------CTCT-TTT-T----GTGGATGAGATCTGCAAAA-T-T-AAACCTTT-C----TTC--TTGGGACAAATTGG-AG-T-CAGT-TTTGT-A-CATGGAGTGTGAATTG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TGA-------T----T
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_304221              2895 136 -      7053 GAAT---AAA-AATCTTGCT-CAT-TAACA-----C-------------ATCA-TTT-T----GTGGATAAGACCTGCAAAG-T-T-AAACTTTT-C----TTT--TTGGGA-AAATTGG-CA-T-TAGT-TGTGT-A-C--AGAGTGTGAATTG---AT--AA-TGTCCA-T-ATTTTT-CTTC----TAAT----TAT---TT
i Chrysochloris_asiatica.ChrAsi_scaffold_304221         C 0 C 0
s Colobus_angolensis.KN985967.1                          10889902 138 +  10971483 GAAT---AAA-GATACAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTgaaaaa-t-t-aaatcttt-c----ttc--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147667830 138 + 156195979 GAAT---AAA-GATACAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAATCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            19813 138 +     23629 GAAT---AAA-GACACAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAACCTTT-C----TTC--TAGAGACAAGCTGG-AG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TCAT----TGT---TT
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60624216  98 +  78930452 ---C---AAA-CATGTTGCT-TAT-TACCA-----TTATTccaattattatca-ttt-t----gtggATTGGACCAGCATAA-T-T-AAAGTTTC-CCCCCCTT--TAGGGACAAATTGA--G-G-CA-----------------------------------------------------------------------------
i Condylura_cristata.JH655880.1                         C 0 I 37
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         4641 125 -      5782 ----------------AGCT-TGT-TAACA-----C-------------CTCA-TTC-T----GTGGACTGTGTCTGCACAA-T-T-AAACCTTT-C----TTC--TACAGACAAATTGA-TG-T-TGGT-TGTCT-G-CATGGAGTGTAAATTG-GCA-G----TGTCCA-T-ATTT-T-ACTG----TAAA----T-T---TG
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 284241 139 -    399297 AAAT---AAA-TATGCAGCT-TAT-TAACA-----C-------------CTCA-TTT-T----GTACATGAGACCTGGAAAA-T-T-AAGCCTTC-A----TTA--AAAGGACAAAGTAG-AG-T-TTGT-TGTTTTC-TGTGGAGTGTGAATTG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TAAT----GAC---TT
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53036527 138 +  72327488 aaat---aaa-tatgcAGCT-TAT-TAACA-----C-------------CTCA-TTT-T----GTACAGGAGACCTGAAAAA-C-T-AAGCCTTC-A----TTA--CAGGGACAAAGTGG-AA-T-TAGT-TGGTT-T-TGTGGAGTGTGAATTG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TAAT----GAC---TT
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              4113  75 -     22648 GA------AA-AATATTGCT-TAG-TAACA-----C-------------TTTG-TTT-T----ATAGATTGAACCTGTGCAA-T-T-AAATCTTT-G----TTT--TAGGGACAAAAT---------------------------------------------------------------------------------------
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 I 47
s Cryptoprocta_ferox.CryFer_flattened_line_19014            59688  64 -     70449 -----------------------------------------------------------------------------------------------------T----TAGGGATA-ATTGA-AG-T-TAGT-TGTGT-A-TATGGAGTGTAAATCG---A-G-A-GTGTCCA-T-AATT-C-CCTC----T---------------
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 62 I 4
s Ctenodactylus_gundi.CteGun_scaffold_447                  216369 143 -    956709 GAAT---GAA-AATGTAACT-CAT-TAACACCACAC-------------CTCA-TTT-T----ATAGATGAGACTCCCCAAA-T-T-AA-TTTTT-C----TTC--TAGGGACAAATTGG-AC-T-CAGT-TGTAT-A-TGTGAAGAGTGGATTG---AT-T--GATTCAATT-ATTT-T-ACTC----TGAT----AAT---TT
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 37902 138 -     67205 AAAT---AAA-GATGGAACT-TAT-TAAGA-----A-------------CACA-TTT-T----GTGCATGTGACTTCTGAAA-T-C-AAATGTTT-C----TTC--TAGGCACAAGTTGG-GG-T-TAGT-TGTAT-A-TATGGAGTGTGAACTG---AT-TA--TGTCTA-T-GTTT-T-ATTC----TAAT----TCT---GT
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                22732 136 +     26546 AAAT---AAA-GATGTAACT-TAT-TA--------A-------------CTCA-CTT-T----CTGAATGAGACCTCTGAAA-T-C-AAATCTTT-C----TTC--TAGGGACAAATTGG-AA-T-TAGT-TGCAT-A-TATGGAGCGTGAGTTG---AT-TA--TGTCCA-T-ATTT-TAATTC----TAAT----TAT---TT
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             63874 138 -    236241 AAAT---AAA-GATGTAATT-TAT-TAAGA-----A-------------CGCA-TTT-T----GTGAATGAGACCTCCGAAA-T-C-ACATCCTT-C----TTC--TAGGGACAAATTTG-AG-T-TAGT-TGTAT-A-TAAGGAGCATGAGTTG---AT-TA--TGTCCA-T-ATTT-T-AATC----TAAT----TAT---TT
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          186990 138 -   6883506 GAAT---AAA-GATGCAGCT-CAT-TTACA-----C-------------TTCA-TTT-T----GTGGATGAGATTTGCAAAA-G-T-AAGCCTTT-C----TTC--TTGGGACAAACTGG-AG-T-CTGT-TGTGT-T-TGTGGAGTGTGAATTG---AT--A-GTGTGCA-T-ATTT-T-ACTt----tga-------ttattt
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16850416 138 +  31942871 GAAT---AAA-GATGTAGCT-TAT-TAACA-----C-------------CTCA-TTT-T----GTGGATGAGACCTGCAAAA-T-T-AAACCTTT-C----TTC--TAGGGACAAAGTGG-AG-T-TAGC-TGTGT-A-TATGGAGTGCAAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TAAG----TAT---TT
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80042740 125 -  96802777 GAAT---AAA-GATGTAGCT-TAT-TAACA-----C-------------CTTG-TTT-T----GTGAATTGGACGTGCAAAA-T-T-AAAGCTTT-C----TTC--CAGGGACAAACTGA-AG-T-TGGT-TGTGT-A-TATGGGGTGTAAATGA---AT--A-GTGTCCA-T-CTAA-T-------------------------
i Delphinapterus_leucas.KZ290064.1                      C 0 I 1
s Desmodus_rotundus.KZ672188.1                           18703185 138 -  18957592 GAAT---AAG-GATGTAGTT-TAT-TAACA-----C-------------CCCA-TTT-T----GTGGCTTGTACCTGCAAAA-T-T-AAACCTTT-C----TTT--TAGGGACAAATTGA-AG-T-TGGT-TGTAT-A-TTTGGAGTGTAAATTG-----GTA-GTGtctg-t-attt-t-attc----taat----tat---tt
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 328628 138 +    993696 GAAT---AAA-GATGTAGCT-CAT-TAACA-----C-------------CTCA-TTT-T----GTGGATTGGACCTGCAAAA-C-T-AAACCTTT-T----TTC--TAGCAATGAATTGA-AG-T-TAGC-TGTGT-A-CATGGAGTGTAAATTG---AT--A-GTGTCCA-T-ATTT-T-ACTC----taat----tgt---tt
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   9262 138 +    151128 GACG---AAA-GATGTAGCT-CAT-TAACA-----C-------------CTCA-TTT-T----GTGGATTGGACCTGCAAAA-C-T-AAACCCTT-T----TTC--TAGCGATGAATTGA-AT-T-TAGC-TGTGT-A-TATGGAGTGTAAATTG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TAAT----TGT---TT
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   161686 137 +    228994 AAAT---AAA-GGTAGAACT-TAG-TAAGA-----A-------------CTCA-TTT-T----GTGAATGAAGCTTT-GAAA-T-C-ATATCTTT-C----TTC--TAGGGGCAAATTGG-AG-T-TAGT-TGCAT-A-TATGGAGTGTGAACTG---AT-TA--TGTGTA-T-ATTT-T-ATTC----TAAT----TAT---TT
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3661524 128 +   4240102 GAAT---AAAGGACACAGCT-TAT-TAACA-----C-------------CTCA-CTA-C----ACGAATGAGATCTACAAAA-T-G-CATCTTTC-C----TTG--TAGGATTGAATTGG-AG-T-TAAT-TGTGT-A-TTTGAAGTGTGAATTG---AT--A-GTGTCCA-T-ACCT-T-AA----------------------
i Dipodomys_ordii.KN672545.1                            C 0 I 5
s Dipodomys_stephensi.DipSte_scaffold_84338                  3898 128 -     11986 GAAT---AAAGGACACAGCT-TAT-TAACA-----C-------------CTCA-CTA-C----ACGAATGAGATCTACAAAA-T-G-AATCTTTC-C----TTG--TAGGATTGAATTGG-AG-T-TAAT-TGTGT-A-TTTGAAGTGTGAATTG---AT--A-GTGTCCA-T-ACCT-T-AA----------------------
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 I 5
s Dolichotis_patagonum.DolPat_scaffold_14102                42446 115 -     73477 AAAT---AAT-GATGTAACT-TAT-TAAGA-----A-------------CTCA-TTT-T----GTGAATGAGACCTCCAAAA-T-C-GAAC-----C----TTC--TAGGGACAAATTGA-AG-T-TGGT-TGTAT-A-CAGGGATCATGAGTTG---AT-TA--TATCCA----------------------------------
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 I 18
s Echinops_telfairi.JH980316.1                           23006901 115 -  44670279 ----------------------------TA-----C-------------ATCA-TAT-T----ATAGCTATGGCCTGCAAAA-T-T-AAAGCTTT-C----TTT--TTGTGAAAAATTGG-TG-T-TAGTTTG--T-A-TAAAGAGTGTGAAATA---AT--AA-TGccta-t-attt-t-attc----taat----tat---tt
i Echinops_telfairi.JH980316.1                          I 11 C 0
s Eidolon_helvum.KE772537.1                                 15346 138 +     24177 GAAT---AAG-GATGTATCT-TAT-TAACA-----T-------------CTCA-TTT-T----GGGGATTGTATCTGCAAAA-T-C-AAACCTTT-C----TTC--TAGGGATAAATTGA-AG-T-TGGT-TGTGT-A-TATGGAGCTTAAGTTG-----GTA-GAGTcca-g-attt-t-attc----taat----tat---tt
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1498735  90 +   1727528 gaat---aaa-tatgAAGCT-AGT-TAACA-----C-------------CTTG-TTT-T----GTGGACTGGACCTGCAAAA-T-T-AAAGCTTT-C----TTC--TAAAGACAGATTTA-AG-T-TAGT-TGT-----------------------------------------------------------------------
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 I 37
s Elephantulus_edwardii.JH947210.1                        7836681 115 +  15467074 TACT---AAA-AATGAGGTT-AAT-TAGTA-----C-------------CTCA-CTT-T----CTGGCTG-GACCTGCAAAA-T-T-ACA---TT-T----TTG--GAGGAATATATTGGCAG---TAGT-TTCAA-G-TATGGAATATGAAATG---AT--AA-TGTTTA----------------------------------
i Elephantulus_edwardii.JH947210.1                      C 0 I 17
s Ellobius_lutescens.LOEQ01003611.1                        245230 137 -    369425 -AAT---AAA-TACGCAGCT-TAT-TAACA-----C-------------CTCA-TTT-T----GTACAAGGGACCTGAAAAA-C-T-AAGCCTTC-A----TTA--TAGGGACAAAGTGG-AG-T-TAGT-TGTTG-T-TGTGGAGTGTGAATTG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TAAT----GAC---TT
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01076532.1                           1582 137 +      9159 -aat---aaa-tatgcagaT-TAT-TAACA-----C-------------CTCA-TTT-T----GTACAGGGGACCTGAAAAA-C-T-AAGCCTTC-A----TGA--TAGGGACAAACTGG-AG-T-TAGT-TGTTG-T-TGTGAAGTGTGAATTG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TAAT----GAC---TT
i Ellobius_talpinus.LOJH01076532.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85879561 128 +  99434291 aaat---aaa-aatgtagct-tAT-TAGCA-----C-------------ATTA-TTT-T----GTGAATTGGACCTGCAGAA-T-G-AAACCTTT-C----T----TAGGAACAAACTGA-AG-T-TAGT-TGTGT-A-TATGGAGTGTAAATTG---AT--A-GTGTCCA-T-ATTT-T-CCTC----T---------------
i Enhydra_lutris.KZ291749.1                             C 0 I 4
s Eptesicus_fuscus.JH977687.1                             4710945 138 +   6522550 aaat---aag-gGTATAGGT-TAT-TAACA-----C-------------CTCA-TTT-T----TTGGATTGTACTTGCAAAA-T-T-AAGCCTTT-C----TTT--TAAGGACAAATTAA-AG-T-TGGT-TGTAT-A-TATGGAGTATAAATTG-----GTAA-TATCCA-T-ATTC-t-acta----taat----tat---tt
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5858489 137 -   7175178 GAAT---AAA-GATGTAGCT-TAT-TAACA-----C-------------CTCA-TTT-T----GTGGATTAGACCTGCAAAA-T-T-AAACCTTT-C----TTC--TAGGGACACGTTGA-AG-T-TCAT-TGTGA-A-TATGGAGTGTAAATTG---AT--A-GCGTCCA-T-ATTT-T-ACTc----tgat----tat----t
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13356975 137 +  41866177 GAAT---AAA-GATGTAGCT-TAT-TAACA-----C-------------CTCA-TTT-T----GTGGATTAGACCTGCAAAA-T-T-AAACCTTT-C----TTC--TAGGGACACGTTGA-AG-T-TCAT-TGTGA-A-TATGGAGTGTAAATTG---AT--A-GCGTCCA-T-ATTT-T-ACTc----tgat----tat----t
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          18465 137 +     92910 GAAT---AAA-GATGTAGCT-TAT-TAACA-----C-------------CTCA-TTT-T----GTGGATTAGACCTGCAAAA-T-T-AAACCTTT-C----TTC--TAGGGACACGTTGA-AG-T-TCAT-TGTGA-A-TATGGAGTGTAAATTG---AT--A-GCGTCCA-T-ATTT-T-ACTc----tgat----tat----t
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11543970 135 +  16010500 aaa----aaa-gatg----t-tat-taacA-----C-------------CTAA-CAT-T----GGGGTTTGGACCtgcaaaa-t-t-aaacattt-t----ttttctaaagataaacTAA-AG-G-TAGT-TGTGT-C-TATGGAGTGTAAATTA-ACA-G----TGCCCA-C-ATTA-T-ACTC----TAAT----TAT---TT
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48782141 138 -  48907691 GAAT---AAA-GATACAGCT-TAT-TAACA-----C-------------TGCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAATCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          320991 125 +    330699 GAAT---AAA-GATGTAGCT-TAT-TAACA-----C-------------CTTG-TTT-T----GTGGATTGGACGTGCAAAA-T-T-AAAGCTTT-C----TTC--CAGGGACAAATTGA-AG-T-TGGT-TGTGT-A-TATGGGGTGTAAATGA---AT--A-GTGTCCA-T-CTAA-C-------------------------
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 I 9
s Eubalaena_japonica.EubJap_flattened_line_7756             67443 125 +     89355 GAAT---AAA-GATGTAGCT-TAT-TAACA-----C-------------CTTG-TTT-T----GTGGATTGGACGTGCAAAA-T-T-AAAGCTTT-C----TTC--CAGGGACAAATTGA-AG-T-TGGT-TGTGT-A-TATGGGGTGTAAATGA---AT--A-GTGTCCA-T-CTAA-T-------------------------
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 I 9
s Eulemur_albifrons.k141_715837                             10533 138 +     13586 GAAT---AAA-GATGTAGCT-TAT-TAACA-----C-------------CTCA-TTT-T----GTGGATGAAACCTGCAAAA-T-T-AAACCTTT-C----TTC--TAGGGACAAAGTGG-AG-T-TAGC-TGTGT-A-TACGGAGTGCGAATAG---AT--A-GTGTCCC-T-ATTT-T-ACTC----TAAA----TAT---TT
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_1015201                              3792 138 -      4292 GAAT---AAA-GATGTAGCT-TAT-TAACA-----C-------------CCCA-TTT-T----GTGGATGAAACCTGCAAAA-T-T-AAACCTTT-C----TTC--TAGGGACAAAGTGG-AG-T-TAGC-TGTGT-A-TACGGAGTGTGAATAG---ATG---GTGTCCA-T-ATTT-T-ACTC----TAAA----TAT---TT
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            16929 138 +     36558 GAAT---AAA-GATGTAGCT-TAT-TAACA-----C-------------CTCA-TTT-T----GTGGATGAAACCTGCAAAA-T-T-AAACCTTT-C----TTC--TAGGGACAAAGTGG-AG-T-TAGC-TGTGT-A-TACGGAGTGCGAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TAAA----TAT---TT
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            13251 138 +     60246 GAAT---AAA-GATGTAGCT-TAT-TAACA-----C-------------CTCA-TTT-T----GTGGATGAAACCTGCAAAA-T-T-AAACCTTT-C----TTC--TAGGGACAAAATGG-AG-T-TAGC-TGTGT-A-TACGGAGTGCGAATAG---AT--A-GTGTCCC-T-ATTT-T-ACTC----TAAA----TAT---TT
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                16736 138 +    109717 GAAT---AAA-GATGTAGCT-TAT-TAACA-----C-------------CCCA-TTT-T----GTGGATGAAACCTGCAAAA-T-T-AAACCTTT-C----TTC--TAGGGACAAAGTGG-AG-T-TAGC-TGTGT-A-TACGGAGTGTGAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TAAA----TAT---TT
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 4719 138 -     19505 GAAT---AAA-GATGTAGCT-TAT-TAACA-----C-------------CTCA-TTT-T----GTGGATGAAACCTGCAAAA-T-T-AAACCTTT-C----TTC--TAGGGACAAAATGG-AG-T-TAGC-TGTGT-A-TACGGAGTGCGAATAG---AT--A-GTGTCCC-T-ATTT-T-ACTC----TAAA----TAT---TT
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                21394 138 +     27497 GAAT---AAA-GATGTAGCT-TAT-TATCA-----C-------------CTCA-TTT-T----GTGGATGAAACCTGCAAAA-T-T-AAACCTTT-C----TTC--TAGGGACAAAGTGG-AG-T-TAGC-TGTGT-A-TACGGAGTGCGAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TAAA----TAT---TT
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           23850 138 +     26808 GAAT---AAA-GATGCAGCT-TAT-TAACA-----C-------------CTCA-TTT-T----GTGGATGAAACCTGCAAAA-T-T-AAACCTTT-C----TTC--TAGGGACAAAGTGG-AG-T-TAGT-TGTGT-A-TACGGAGTGCGAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TAAA----TAT---TT
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                38582 138 +     46535 GAAT---AAA-GATGTAGCT-TAT-TAACA-----C-------------CTCA-TTT-T----GTGGATGAAACCTGCAAAA-T-T-AAACCTTT-C----TTC--TAGGGACAAAATGG-AG-T-TAGC-TGTGT-A-TACGGAGTGCGAATAG---AT--A-GTGTCCC-T-ATTT-T-ACTC----TAAA----TAT---TT
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              21323 138 -     29447 GAAT---AAA-GATGTAGCT-TAT-TAACA-----C-------------CTCA-TTT-T----GTGGATGAAACCTGCAAAA-T-T-AAACCTTT-C----TTC--TAGGGACAAAATGG-AG-T-TAGC-TGTGT-A-TACGGAGTGCAAATAG---AT--A-GTGTCCC-T-ATTT-T-ACTC----TAAA----TAT---TT
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129901263 128 - 159252932 GAAT---AAA-GATGTAGCT-TAT-TAGCA-----C-------------CTTA-ATT-T----GTGGATCAGACCTGCAAAA-T-T-AAATCTTT-C----T----TAGGGACAGATTGA-AG-T-TAGT-TGTGT-A-TATGGAGCGTAAATTG---AT--A-GTGTACA-T-ATTT-T-CATC----T---------------
i Felis_catus.CM001386.2                                C 0 I 4
s Felis_catus_fca126.CM031420.1                         129288240 128 - 158578461 GAAT---AAA-GATGTAGCT-TAT-TAGCA-----C-------------CTTA-ATT-T----GTGGATCAGACCTGCAAAA-T-T-AAATCTTT-C----T----TAGGGACAGATTGA-AG-T-TAGT-TGTGT-A-TATGGAGCGTAAATTG---AT--A-GTGTACA-T-ATTT-T-CCTC----T---------------
i Felis_catus_fca126.CM031420.1                         C 0 I 4
s Felis_nigripes.FelNig_flattened_line_8080                 29430 128 +     52776 GAAT---AAA-GATGTAGCT-TAT-TAGCA-----C-------------CTTA-ATT-T----GTGGATCAGACCTGCAAAA-T-T-AAATCTTT-C----T----TAGGGACAGATTGA-AG-T-TAGT-TGTGT-A-TATGGAGCATAAATTG---AT--A-GTGTACA-T-ATTT-T-CCTC----T---------------
i Felis_nigripes.FelNig_flattened_line_8080             C 0 I 4
s Fukomys_damarensis.KN123630.1                          13899354  67 -  19261668 ----------------------------------------------------------------------------------------AGCCTTT-A----TTC--TAGGGACAAATTGG-AG-T-TAGT-TGTAT-A-TATGGAGGATGAATTGATCA------TTTCCA-T-AT-----------------------------
i Fukomys_damarensis.KN123630.1                         I 43 I 11
s Galago_moholi.ctg555                                     216584 125 -    847004 GAAT---AAA-AATGTAAC--TAT-TAACA-----C-------------CTCA-TTG-T----GTTTATAATACCTGCAAAA-T-T-AAACCTTA-C----TTC--TCGGGACAAAGTAG-AG-T-TAGC-TGTGT-A-TCTGGAGTGCGAATAGATC--G----TGTCTA-T-ACTT-T-A-----------------------
i Galago_moholi.ctg555                                  C 0 I 7
s Galago_senegalensis.k141_964197                           18946 125 -     43889 GAAT---AAA-AATGTAAC--TAT-TAACA-----C-------------CTCA-TTG-T----GTTTATAATACCTGCAAAA-T-T-AAACCTTA-C----TTC--TCGGGACAAAGTAG-AG-T-TAGC-TGTGT-A-TCTGGAGTGCGAATAGATC--G----TGTCTA-T-ACTT-T-A-----------------------
i Galago_senegalensis.k141_964197                       C 0 I 7
s Galagoides_demidoff.k141_1769638                          16087 125 +     27357 GAAT---AAA-AATGTAAC--TAT-TAACA-----C-------------CTCA-TTG-T----GTTTGTAATACCTGCAAAT-T-T-AACCTTTA-C----TTC--TGGGGACAAAGTAG-AG-C-TAGC-TGTGT-A-TCTGGAGTGCGAATAG---AT--A-GTGTCTA-T-ACTT-T-A-----------------------
i Galagoides_demidoff.k141_1769638                      C 0 I 7
s Galeopterus_variegatus.GalVar_scaffold_354               160856 131 +    324696 AAAT---AAA-GATATAGCC-TAT-TATCA-----C-------------CTCA-TTT-T----GTGGATGAGACCTGCAAAA-T-T--------T-G----TTC--TAGGGACAAATTGG-AG-T-TAGT-CGTAT-A-TATACAGCATGAACTG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TAGT----TAT---TT
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    188460  90 -    189561 GAAT---AAA-TATGTAGCT-AGC-TAACA-----C-------------CCTG-TTT-T----GTGGACTGGACCTGCAAAA-T-T-AAAGCTTT-C----TTC--TAGAGACAGATTTA-AG-T-TAGT-TGT-----------------------------------------------------------------------
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 I 37
s Glis_glis.GliGli_scaffold_79770                           17775 134 -     18683 GAAT---AAA-TATGTAGCT-TAT-TAACA-----C-------------CTCC-TTT-T----GTGGATGAGACCTGCAAAA-T-T-AAGCCTTT-C----TGC--TAGGAACAAAATTG-AT-T-TGGT-TATGT-A-TATGGAGTGTGAATTG---ATG---GTGTCCA-T-ATTT-T-ATCCTAATT---------------
i Glis_glis.GliGli_scaffold_79770                       C 0 I 4
s Gorilla_beringei.k141_111300                              10544 138 -     14630 GAAT---AAA-GATACAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGACGAGACCTGAAAAA-T-T-AAACCTTT-C----TTC--TAGAGACAAGTTGG-AG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTG----TCAT----TAT---TT
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119657644 138 - 195582420 GAAT---AAA-GATACAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGACGAGACCTGAaaaa-t-t-aaaccttt-c----ttc--tAGAGACAAGTTGG-AG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTG----TCAT----TAT---TT
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   81079 134 +    118900 GACT---AAC-TATGTAGCT-TAT-TAACA-----C-------------CTCC-TTT-G----GTGAATGAGACCTGTAAAA-T-T-AAGCCTTT-C----TAC--TAGGAACAAATTGG-AT-T-TAGC-TATGT-A-TACAGAGTGTGAATTG---ATG-A--TGTCCA-T-ATTT-T-ATCATAATT---------------
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 I 4
s Hapalemur_alaotrensis.k141_1280836                         7325 138 +     10286 GAAT---AAA-GATGTAGCT-TAT-TAACA-----C-------------CTCA-TTT-T----GTGGATGAAACCTGCAAAA-T-T-AAACCTTT-C----TTC--TAGGGACAAAGTGG-AG-T-TAGC-TGTGT-A-CACAGAGTGCGAATAC-ACA-G----TGTCCA-T-ATTT-T-ACTC----TAAA----TAT---TT
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             5806 138 -     11661 GAAT---AAA-GATGTAGCT-TAT-TAACA-----C-------------CTCA-TTT-T----GTGGATGAAACCTGCAAAA-T-T-AAACCTTT-C----TTC--TAGGGACAAAGTGG-AG-T-TAGC-TGTGT-A-CACGGAGTGCGAATAC---AT--A-GTGTCCA-T-ATTT-T-ACTC----TAAA----TAT---TT
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                            11130 138 +     56096 GAAT---AAA-GATGTAGCT-TAT-TAACA-----C-------------CTCA-TTT-T----GTGGATGAAACCTGCAAAA-T-T-AAACCTTT-C----TTC--TAGGGACAAAGTGG-AG-T-TAGC-TGTGT-A-CACGGAGTGCGAATAC---AT--A-GTGTCCA-T-ATTT-T-ACTC----TAAA----TAT---TT
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        34379 138 -     42470 GAAT---AAA-GATGTAGCT-TAT-TAACA-----C-------------CTCA-TTT-T----GTGGATGAAACCTGCAAAA-T-T-AAACCTTT-C----TTC--TAGGGACAAAGTGG-AG-T-TAGC-TGTGT-A-CACGGAGTGCGAATAC---AT--A-GTGTCCA-T-ATTT-T-ACTC----TAAA----TAT---TT
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        51005 138 -     54384 GAAT---AAA-GATGTAGCT-TAT-TAACA-----C-------------CTCA-TTT-T----GTGGATGAAACCTGCAAAA-T-T-AAACCTTT-C----TTC--TAGGGACAAAGTGG-AG-T-TAGC-TGTGT-A-CACGGAGTGCGAATAC---AT--A-GTGTCCA-T-ATTT-T-ACTC----TAAA----TAT---TT
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              24743  62 +     53719 GAAT---AAA-GATGTAGCT-TAT-TAGCA-----C-------------CTTA-TTT-T----GTGAATCAGACCTGCAAAA-T-T-AAATCTTT--------------------------------------------------------------------------------------------------------------
i Helogale_parvula.HelPar_flattened_line_22962          C 0 I 69
s Hemitragus_hylocrius.HemHyl_scaffold_16669                35557  90 -     91191 GAAT---AAA-TATGAAGCT-AGT-TAACA-----C-------------TTTG-TTT-T----GTGGACTGGACCTGCAAAA-T-T-AAAGCTTT-C----TTC--TAGAAACAGATTTA-AG-T-TAGT-TGT-----------------------------------------------------------------------
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 I 37
s Heterocephalus_glaber.JH602058.1                        2563447 138 +  31725842 gaat---aaA-GATGTAACT-TAT-TAACA-----A-------------TTCA-TTT-T----GTGGATGAGACCTccaaaa-t-c-aaacattt-t----ttc--tAGGGAAAAATTGG-AA-T-TAGT-TGTAT-A-TATGGAGCGTGAATtg------attatttcca-t-attt-t-attc----taat----tat---gt
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               65036 138 +     73687 GAAC---AAA-GATGTAACT-CAT-TAGTG-----C-------------TTCA-TTT-T----GTGGCTGAGGCCAGAAAAA-T-T-AAATCTTT-C----TTT--CTAGAACAAATTGG-CA-T-TCGT-TGTGT-A-GATAGAGTGTGAATTGTT-A-G----TGTCCA-T-ATTT-T-ACTC----TAAT----TAT---TC
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              152814 138 +    277961 GAAT---AAA-GATGTAGCT-TAT-GAATA-----C-------------CTTG-TTT-T----GTGGATTAGACCTGCAAAA-T-T-AAAGCTTT-C----TTC--TCGGGGCAAATTGA-AG-T-TAGT-TGTGT-A-TATGGGGTGTAAATGA---AT--A-GTGTCCA-T-ATTT-T-ACTC----TAAT----TGT---TT
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      286283 138 -    477199 aaat---aaa-gacgTTGCT-TAT-TAACA-----C-------------CTCA-TTT-T----GTGGATTGTACCTGCAAAA-T-G-AAACCTTT-C----TTC--TAGAGACAAATTGA-AG-T-TGGT-TGTAT-A-Tatggagtgtaaattg------gtactgtcca-t-attt-t-actt----taat----tat---tt
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959               3556 138 +     26078 AAAT---AAA-GACATAGCT-TAT-TAACA-----C-------------CTCA-TTT-T----CTGGATTGTACCTGCAAAA-T-G-AAACCTTT-C----TTC--TAGAGACAAATTGA-AG-T-TGGT-TGTAT-A-TATGGAGTGTAAATTG-----GTA-CTGTCCA-T-ATTT-G-ACTT----TAAT----TAT---TT
i Hipposideros_galeritus.HipGal_scaffold_52959          C 0 C 0
s Hoolock_leuconedys.ctg79                                     10465 134 -   7690867 GAAT---AAA-GATACAGCT-TAC-TAACT-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAACCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGA-------AT--A-GTGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 25242  64 -     67322 -----------------------------------------------------------------------------------------------------T----TAGGGATA-ATTGA-AG-T-TAGT-TGTGT-A-TATAGAGTATAAATCG---AT--A-GTGTCCA-T-AATT-T-TCTC----T---------------
i Hyaena_hyaena.HyaHya_flattened_line_20729             I 63 I 4
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           23103 130 -    119109 AAAT---AAA-GATGTAACT-T----AAAA-----A-------------CTCA-TTC-T----GTGAATGAAACCTC-AAAA-T-A-AAAT-----C----TTC--TAGAGACAAATTGG-AG-T-TAGT-TGTAT-A-CATGGACCATGAGTTG---AT-TA--TGTCCA-T-ATTT-T-ATTC----TAAT----TAT---TT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_1816750                             3035 134 +      3202 GAAT---AAA-GACACAGCT-TAT-TAACT-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AGACCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGA-------AT--A-GTGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Hylobates_abbotti.k141_1816750                        C 0 N 0
s Hylobates_agilis.k141_1136966                              1045 134 +      9785 GAAT---AAA-GATACAGCT-TAT-TAACT-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AGACCTTT-C----TTC--TACAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGA-------AT--A-GTGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Hylobates_agilis.k141_1136966                         C 0 C 0
s Hylobates_klossii.k141_468230                              4525 134 +      5464 GAAT---AAA-GATACAGCT-TAT-TAACT-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AGACCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGA-------AT--A-GTGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14629871 134 -  25970782 GAAT---AAA-GATACAGCT-TAT-TAACT-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AGACCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGA-------AT--A-GTGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            2422 134 +      4161 GAAT---AAA-GATACAGCT-TAT-TAACT-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AGACCTTT-C----TTC--TACAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGA-------AT--A-GTGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                    11372 137 +     22540 GAAT---AAA-GATACAACT-TAT-TAACA-----A-------------CTCA-TTT-T----GTGGATAAGACCTCCAAAA-T-C-AAACCTTT-A----TTC--TAGGGACAAATTGG-AG-T-TGGT-TGTAT-A-TATGGAGTGTGAATTG---AT--A--TGTTCA-T-ATTT-T-GTTC----TAAT----TAT---TT
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7131642 125 +  13083262 aaat---aaa-tttgtagCT-TAT-TAACA-----C-------------CTCC-TTT-T----GTGGATGAGACCTGCAAAA-G-T-CAACCTTT-C----TTT--TAGAGACAAATTGG-AT-T-TAAT-TGGAT-A-TATGTAGTGTG--------AT--A-GTGTCCA-T-ATTT-T-ACTC----T---------------
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 I 4
s Indri_indri.k141_2197838                                   2864 138 +      3484 GAAT---AAA-GATGTAGCT-TAT-TAACA-----C-------------CTCA-TTT-T----GTGGATGAAACCTGCAAAA-T-T-AAACCTTT-C----TTC--TAGGGACAAAGTGG-AG-T-TAGC-TGTGT-A-TACAGAGTGTGAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TAAA----TAT---TT
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              14967 125 +     17520 GAAT---AAA-GATGTAGCT-TAT-TAACA-----C-------------CTTG-TTT-T----GTGGATTGGATGTGCAAAA-T-T-AGAGCTTT-C----TTC--TAGGGACAAATTGA-AG-T-TGGT-TGTGT-A-TATGGGGTGTAAATGA---AT--A-GTGTCCA-T-CTAA-T-------------------------
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 I 1
s Jaculus_jaculus.JH725517.1                              8580434 138 +  11848649 AAAG---TAA-GATATAGCT-TAT-TAGCA-----C-------------TTCA-TTT-T----GTGGGTGAGACCTAAAAAA-C-T-AAGCCTTT-C----ATG--TGGGGACAAATTGG-AG-T-GAAT-TGTGT-A-CATGGAGTATAAATTG---A-G-A-GTGTTCA-T-AATT-T-ACTG----CAAT----Gat---tt
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               29587 125 +     37189 GAAT---AAA-GATGTAGCT-TAT-TAACA-----C-------------CTTG-TTT-T----TTGGATTGGACGTGCAAAA-T-T-AAAGCTTT-C----TTC--CACGGACAAATTGA-AG-C-TGGT-TGTGT-A-TGTGGGGTGTAAATGA---AT--A-GTGTCCA-T-CTAA-T-------------------------
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 I 9
s Lagothrix_lagothricha.k141_12968                          55297 135 -    147782 GAAT---AAA-GATATAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGGTGAGACCTGAAAAA-T-T-AAATCTGT-C----TTC--TAGAGACAAGTTGA--GAT-TAGT-TGTGT-A-TATAGAGTATTAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TTAT----TA------
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    7496 138 +     26176 AAAT---AAG-AGTATAGGT-TAT-TAACA-----C-------------CTCA-TTT-T----TTGTATTGTGCCTGCAAAA-T-T-AAGCCTAT-C----TTT--TAAGGACAAATTAA-AG-T-TGGT-TGTAT-A-TATGGAGTATAAATTG-----GTA-GTATCTA-T-ATCC-T-ATTA----TAAT----TAT---TT
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258412683 138 - 285822530 GAAT---AAA-GATGTAGCT-TAT-TAACA-----C-------------CTCA-TTT-T----GTGGATGAAACCTGCAAAA-T-T-AAACCTTT-C----TTC--TAAGGACAAAGTGG-AG-T-TAGC-TGTGT-A-CAAGGAGTGCGAATAC---AT--A-GTGTCCA-T-ATTT-T-ACTC----TAAA----TAT---TT
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        30007 134 +     39228 GAAT---ACA-GATGCAGCT-TAT-TAACA-----C-------------CTCA-TTT-T----GTGGATGAGACCTGCAAAA-T-T-AAACCTTT-C----TTC--TAGAGTCAAAGTGG-TG-T-TAGC-TGTGT-A-TATGGAGTGCAA-------AT--A-GTGTCCA-T-ATTT-T-ACTC----TAAA----TAT---TT
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            59371 134 +     63517 GAAT---ACA-GATGCAGCT-TAT-TAACA-----C-------------CTCA-TTT-T----GTGGATGAGACCTGCAAAA-T-T-AAACCTTT-C----TTC--TAGAGTCAAAGTGG-TG-T-TAGC-TGTGT-A-TATGGAGTGCAA-------AT--A-GTGTCCA-T-ATTT-T-ACTC----TAAA----TAT---TT
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        37755 134 -     38897 GAAT---AAA-GATGTAGCT-TAT-TAACA-----C-------------CTCA-TTT-T----GTGGATGAGACCTGCAAAA-T-T-AAACCTTT-C----TTC--TAGAGTCAAAGTGG-TG-T-TAAC-TGTGT-A-TATGGAGTGCAA-------AT--A-GTGTCCA-T-ATTT-T-ACTC----TAAA----TAT---TT
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      3797 134 -     13103 GAAT---ACA-GATGCAGCT-TAT-TAACA-----C-------------CTCA-TTT-T----GTGGATGAGACCTGCAAAA-T-T-AAACCTTT-C----TTC--TAGAGTCAAAGTGG-TG-T-TAGC-TGTGT-A-TATGGAGTGCAA-------AT--A-GTGTCCA-T-ATTT-T-ACTC----TAAA----TAT---TT
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3094012 127 -   3498232 gaat---aaa-GATGTAGCT-TAT-TAGCA-----C-------------CTTA-TTT-T----GTGAGTTGGACCTG-AAAA-T-T-AAACCTTT-C----T----TAGGAACAAATTGA-AG-T-TAGT-TGTGT-A-TATGGAGTATAAATTG-----GTA-GAGTCCA-T-ATTT-T-CCTC----T---------------
i Leptonychotes_weddellii.KB714749.1                    I 202 I 4
s Lepus_americanus.LepAme_scaffold_62849                    22345  75 +     22452 -----------------------------------------------------------------------------------------------------TGC--TGTGAACAAATTGG-AG-T-TGGT-TGTGT-A-AATGGAGTGTGAATTG-----GTA-GTGTATA-T-ATTT-C-ACTC----TAAT----TAG---TT
i Lepus_americanus.LepAme_scaffold_62849                I 62 C 0
s Lipotes_vexillifer.KE558548.1                            141895 125 +   3060487 GAAT---AAA-GATGTAGCT-TAT-TAACA-----C-------------CTTG-TTT-T----GTGGATTGGACATGCAAAA-T-T-AAAGCTTT-C----TTC--CAGGGACAAACTGA-AG-T-TGGT-TGTGT-A-TATGGGGTGTAAATGA---AT--A-GTGCCCA-T-CTAA-T-------------------------
i Lipotes_vexillifer.KE558548.1                         C 0 I 1
s Lophocebus_aterrimus.ctg55                             19253762 138 +  19376315 GAAT---AAA-GATGCAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATAAGACCTGAAAAA-T-T-AAACCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           16558  94 +     84689 ----------------------------------------------------G-TGA-G----GTTTTTAATACCTGCAAAA-T-T-AAACTTTA-C----TTC--TAGGGACAAAGTGG-AG-G-TAGC-TGAGT-A-TCTGGAGTGTGA-------AT--A-GTGTCTA-T-ACTT-T-A-----------------------
i Loris_lydekkerianus.k141_550999                       I 9 I 7
s Loris_tardigradus.ctg97                                 3784291  94 +   6799190 ----------------------------------------------------G-TGA-G----GTTTTTAATACCTGCAAAA-T-T-AAACTTTA-C----TTC--TAGGGACAAAGTGG-AG-G-TAGC-TGAGT-A-TCTGGAGTGTGA-------AT--A-GTGTCTA-T-ACTT-T-A-----------------------
i Loris_tardigradus.ctg97                               I 9 I 7
s Loxodonta_africana.GL010040.1                          20600592 129 -  62548349 gaat---aaa-gatGTAGCT-CAT-TCGCA-----C-------------CTCA-TTT-T----GTGGATGAGACCCGCAAAA-T-T-AAACCT-T-C----Ttt--ttgggacaaattga-tg-t-tgGT-TGTAT-A-TATAGCGTGTGAATTG---AT--A-GTGTCTA-T-ATTT-T-ACTC----T---------------
i Loxodonta_africana.GL010040.1                         C 0 I 8
s Lycaon_pictus.CM007556.1                               11097261 129 +  39895028 gaat---aaa-gatgTAGCT-TAT-TAGCA-----G-------------TTTA-TTT-T----GTGAATTGGACCTGCAAAA-T-TTAAACCTTT-C----T----TAGGAACAAGATGA-AG-T-TAGT-TGTGT-A-TATGGAGTGTAAATTG-ACA-G----TGTCCA-T-ATTT-T-CCTC----T---------------
i Lycaon_pictus.CM007556.1                              C 0 I 4
s Macaca_arctoides.k141_2201161                             25511 138 +     74745 GAAT---AAA-GATGCAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAATCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12711974 138 +  12821369 GAAT---AAA-GATGCAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAATCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                4547 138 -     26467 GAAT---AAA-GATGCAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAATCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           52418 138 +     63263 GAAT---AAA-GATGCAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAATCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 4528 138 -     26361 GAAT---AAA-GATGCAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAATCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_2667654                                 831 138 -      5626 GAAT---AAA-GATGCAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAATCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Macaca_leonina.k141_2667654                           C 0 C 0
s Macaca_maura.k141_251854                                  50947 138 -     79256 GAAT---AAA-GATGCAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAATCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196041045 138 + 196197964 gaat---aaa-GATGCAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAATCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11451215 138 +  11645122 gaat---aaa-GATGCAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAATCTTT-C----TCC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                   9901 138 -     46448 GAAT---AAA-GATGCAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAATCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                7562 139 -     13212 GAAT---AAA-GATGCAGCT-TAT-TAACA-----C-------------TTCA-TTT-T-T--GTGGATGAGACCTGAAAAA-T-T-AAATCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 21244 138 -     55006 GAAT---AAA-GATGCAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAATCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43846666 138 +  43892939 GAAT---AAA-GATGCAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAATCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               22528 139 -     24607 GAAT---AAA-GATGCAGCT-TAT-TAACA-----C-------------TTCATTTT-T----GTGGATGAGACCTGAAAAA-T-T-AAATCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                               9898 138 -     27140 GAAT---AAA-GATGCAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAATCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                703962 138 +    802869 AAAT---AAG-AATGTATCT-TAT-TAACA-----T-------------CTCA-TTT-T----GGGGATTGTATCTGCAAAA-T-C-AAACCTTT-C----TTC--TAGGGATAAATTAA-AG-T-TGGT-TGTGT-A-TATGGAGTATAAGTTG-----GTA-GAGTCTA-G-ATTT-C-ACTC----TAAT----TAT---TT
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43442931 138 -  43563597 GAAT---AAA-GATGCAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATAAGACCTGAAAAA-T-T-AAACCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4455730 138 -   4543643 GAAT---AAA-GATGCAGCT-TAT-TAACA-----C-------------TTCG-TTT-T----GTGGATAAGACCTGAAAAA-T-T-AAACCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            154245 138 +    252755 GAAT---AAA-GGTGCAGCT-TGT-TAACA-----C-------------CTCA-TAT-T----GTGGATTGGACCTGCAAAA-T-G-AAACCTTT-C----TTC--TAGGAATAAATTGA-AT-T-TAGT-TCTGT-A-TATTGAGTGTAAATTG---AT--A-GTGTCCA-T-ATCT-T-ACCC----TAAT----TAT---TT
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             41843 138 +     58827 aaat---aaa-ggtGCAGCT-TGA-TAACA-----C-------------CTCA-TAT-T----GTGGATTGGACCTGCAAAA-T-G-AAACCTTT-C----TTC--TAGGAATAAATTGA-AT-T-TAGT-TCTGT-A-TATTGAGTGAAAATTG---AT--A-GTGTCCA-T-ATCT-T-ACCC----TAAT----TAT---TT
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36879508 125 +  64221397 aaat---aaa-tttgtagcT-TAT-TAACA-----C-------------CTCC-TTT-T----GTGGATGAGACCTGCAAAA-G-T-CAACCTTT-A----TTT--TAGAGACAAATTGG-AT-T-TAAT-TGGAT-A-TATGGAGTGTG--------AT--A-GTGTCCA-T-ATTT-T-ACTC----T---------------
i Marmota_marmota.CZRN01000005.1                        C 0 I 4
s Megaderma_lyra.MegLyr_scaffold_3562                       67764  90 -    234502 GCAT---AAG-GAGCTTGCT-TAT-TAACA-----C-------------CTCA-TTT-T----GTGGACTGTTCCTGCAAAG-T-C-AAACCTTT-C----TTC--TATAGAAAAATTGG-AG-G-TGAT-TGT-----------------------------------------------------------------------
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 I 45
s Mellivora_capensis.MelCap_flattened_line_15433             8656 128 -     87323 GAAT---AAA-GATGTAGCT-TAT-TAGCA-----C-------------CTTA-TTT-T----GTGAATTGGACCTGCAGAA-T-G-AAACCTTT-C----C----TAGGAACAAATTGA-AG-T-TAGT-GGTGT-A-TATGGAGTGTAAATTG---AT--A-GTGTCCA-T-ATTT-T-CCTC----T---------------
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 I 4
s Meriones_unguiculatus.MerUng_scaffold_9483                 3463 138 +    115071 AAAT---AAA-TACGCAGCT-TAT-TAACA-----C-------------CTCG-TTT-T----GTACATGAGACCTGAAAAA-T-T-AAGCCTTC-A----TTA--TAGTGACAAAATGG-AG-T-TAGT-TGGTT-T-CGTGGAGTGTGAATTA---AT--A-GAGTCCA-T-ATTT-T-ATTC----AAAT----GAC---TT
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1053101 137 -  26018355 aaat---aaa-tatgcagCC-TAT-TAACA-----C-------------CTCA-TTT-T----GTACACGAGCCGTGAAAAA-C-C-AAGCCTTC-A----TTA--CAGGGACAAA-TGG-AG-T-TAGC-TGGTT-T-TGTGGAGTGTGAATTG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TAAT----GAC---TT
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    4558 125 -     12939 GAAT---AAA-GATGTAGCT-TAT-TAACA-----C-------------CTTG-TTT-T----GTGGATTGGACATGCAAAA-T-T-AAAGCTTT-C----TTC--CAGGGACAAATTGA-AG-T-TGGT-TGTGT-A-TATGGGGTGTAAATGA-ACA-G----TGTCCA-T-CTAA-T-------------------------
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 I 1
s Microcebus_murinus.CM007691.1                          16515798  65 +  47401472 ------------------------------------------------------------------------------------------------------------------AAGTGG-TG-T-TAGC-TGTGT-ATTATAGAGTGCGAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TAAA----TAT---TT
i Microcebus_murinus.CM007691.1                         I 74 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  46793 117 -     48017 ----------------------------GG-----C-------------ATCA-TAT-T----GTAGCTATGACCTGCAAAA-T-T-AAAGCTTT-C----TTT--TTGGGACAAAATGG-TA-T-TACTTTGTGT-A-TAGAGCGTGTGAATTA---AT--AA-TGACTA-T-ACTT-T-ATTC----TAAT----TAT---TT
i Microgale_talazaci.MicTal_scaffold_34660              I 12 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               26922 122 -     32043 GAAT---AAG-GATGTAGTT-TAC-TAACA-----C-------------CTCA-TTT-T----GTGGATTGTACCTGCAAAA-T-T-AAACCTTT-C----TTT--TAGGGACAAATTGA-AG-T-TGGT-TGTAT-A-TT-----------------A-G----TATCTG-T-ATTT-T-ACTG----TAAT----TAT---TT
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22826066 137 -  98408828 -aat---aaa-tatgtagct-TAT-TAACA-----C-------------CTCA-TTT-T----GTACAGGAGACCTGAAAAA-C-T-AAGCCTTC-A----TTA--TAGGGACAAAGTGG-AG-T-TAGT-TGTTG-T-TGTGGAGTGTGAATTG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TAAT----GAC---TT
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8215273 138 +  10048721 aaat---aag-gaCATTGCT-TAT-TGACA-----T-------------CTCA-TTT-T----GAGGATTGTAACTGCAAAG-T-T-AAACCTTT-C----TTT--TAAGGACAATTTGA-AG-T-TGTT-TGTAG-A-TATGGAGTGTAAATTG-----GTA-GTGTCCT-T-ATTT-T-ACTC----TAAT----TAT---TT
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            39732 138 +     45743 AAAT---AAG-GACATTGCT-TAT-TGACA-----T-------------CTCA-TTT-T----GAGGATTGTAACTGCAAAG-T-T-AAACCTTT-C----TTT--TAAGGACAATTTGA-AG-T-TGTT-TGTAG-A-TATGGAGTGTAAATTG-----GTA-GTGTCCT-T-ATTT-T-ACTC----TAAT----TAT---TT
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         7480 138 +     29742 GAAT---AAA-GATACAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAATCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-G-TACAGAGTGTGAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        19413 128 -    104932 GAAT---AAA-GATGTAGCT-TAT-TAGAA-----C-------------CTTA-TTT-T----GTGAGTTGGACCTGCAAAA-T-T-AAACCTTT-C----T----TAGGAACAAATTGA-AG-T-TAGT-TGTGT-A-TATGGAGTATAAATTG-----GTA-GTGTCCA-T-ATTT-T-CCTC----T---------------
i Mirounga_angustirostris.MirAng_flattened_line_8852    I 204 I 4
s Mirza_zaza.k141_593947                                     6493  64 -     12809 ------------------------------------------------------------------------------------------------------------------AAGTGG-TG-T-TAGT-TGTGT-A-TATAGAGTGCGAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TAAA----TAT---TT
i Mirza_zaza.k141_593947                                I 74 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 152333 125 +    154973 GAAT---AAA-GATGTAGCT-TAT-TAACA-----C-------------CTTG-TTT-T----GTGAATTGGACGTGCAAAA-T-T-AAAGCTTT-C----TTC--CAGGGACAAATTGA-AG-T-TGGT-TGTGT-A-TATGGGGTGTAAATGA---AT--A-GTGTCCA-T-CTAA-T-------------------------
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 I 1
s Mormoops_blainvillei.MorMeg_scaffold_2952                165431 138 +    265003 GAAT---AAG-GATGTAGTA-TAT-TGACA-----C-------------CTCA-TTT-T----GTGGATTGCACCTGCAAAA-T-T-AAACCTTT-C----TTT--TAGGAACAAATTGA-AG-T-TGGT-TGTAT-A-TTTGGAGTGTAAATTG---AT--A-GTGCCCA-T-ATTT-T-ACTC----TAAT----TAT---TT
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  9133  50 -     19904 GAAT---AAA-TATGAAGCT-AGG-TAACA-----T-------------CTTG-TTT-T----GTGAACTGGACCTGAAA-----------------------------------------------------------------------------------------------------------------------------
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 I 72
s Mungos_mungo.MunMun_flattened_line_8729                  152472  62 -    168139 GAAT---AAA-GATGTAGCT-TAT-TAGCA-----C-------------CTTA-TTT-T----GGGGATCAGACCTGCAAAA-T-T-AAATCTTT--------------------------------------------------------------------------------------------------------------
i Mungos_mungo.MunMun_flattened_line_8729               C 0 I 69
s Murina_feae.MurFea_scaffold_2254                          26264 131 -    100666 AAAT---AA--------GGT-TAT-TTACA-----C-------------CTCA-TTT-T----TTGGATGATACCTGCAAAA-T-T-AAGCCTTT-C----TTT--TAAGGATAAATTAA-AG-T-TGGT-TGTAT-A-TATGGAGTATAAATTG-----GTA-GTATCCA-T-ATTC-T-ACTA----TAAT----TAT---TT
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70773343 137 +  92629107 aaat---aaa-tctgCCGCT-TAC-TAACA-----C-------------CTCA-TTT-T----CCACATGAGACCTGAAACA-T-T-AGGCCTT--A----TTA--TAGGGACAAAGTGG-AG-T-TAGT-TGTTT-T-TGAGGAGTGTGAATTG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TAAT----GAC---TT
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75495407 137 +  98207768 aaat---aaa-tctgCAACT-TAC-TAACA-----C-------------CTCA-TTT-T----CCACATGAGACCTGAAACA-T-T-AAGCCTT--A----TTA--TAGGGCCAAAGTGG-AG-T-TAGT-TGTTT-T-TGAGGAGTGTGAATTG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TAAT----GAC---TT
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67562134 138 +  89017189 aaat---aaa-tctgCAGTT-TAC-CAATG-----C-------------CTCA-TTT-T----CCACATGAGACCTGAAACA-T-T-GAGCCTTT-A----TTA--TAGGGACAAAGTGG-AG-T-TAGT-TGTTT-T-TGAGGAGTGTGAATTG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TAAT----GAC---TT
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74338115 137 +  97876770 aaat---aaa-tctgCAGCT-TAC-TAACA-----C-------------CTCA-TTT-T----CCACATGAGACCTGAAACA-T-T-AAGCCTT--A----TTA--TAGGGCCAAAGTGA-AG-T-TAGT-TGTTT-T-TGAGGAGTGTGAATTG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TAAT----GAC---TT
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             16403  66 +     98495 ------------------------------------------------------------------------------------------------------AT--TAGGAAAAAATTG--TG-TTTAGC-TATGT-G-TAGGCAGTGTAAATTGTT---G---GTATCCA-T-ATTT-C-ATCT----T---------------
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 53 I 4
s Mustela_putorius.JH417978.1                             4430759 128 -  28371801 GAAT---AAA-GATGTAGCT-TAT-TAGCA-----C-------------CTTA-TTT-T----GTGAATTGGACCTGCAGAA-T-G-AAACCTTT-C----T----TAGGAACAAATTGA-AG-T-TAGT-TGTGT-A-TAGAGAGTGTAAATTG---AT--A-GTGTCCA-T-ATTT-T-CCTC----T---------------
i Mustela_putorius.JH417978.1                           C 0 I 4
s Myocastor_coypus.MyoCoy_scaffold_3653                     97892  75 -    117718 -----------------------------------------------------------------------------------------------------TTC--TATGTGCAAGTCGG-GG-T-TAGT-CACAT-A-GATGTAGTGTGAACTC---AT-TA--TGTCCA-C-ATTT-T-TTTC----TAAT----TCT---TT
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 61 C 0
s Myotis_brandtii.KE161952.1                               973278 138 +   8389877 aaat---aag-tgTGAAGGT-TAT-TTACA-----C-------------CTCA-TTT-T----TTGGATTGTACCTGCAAAA-T-T-AAGCCTTT-C----TTT--TAAGGACAAATTAA-AG-T-TGGT-TGTAT-A-TAtggagtataaattg------gtagtatCTA-T-ATTC-t-acta----taat----tat---tt
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5024354 138 +   6462685 aaat---aag-tgTGTAGGT-TAT-TTACA-----C-------------CTCA-TTT-T----TTGGATTGTACCTGCAAAA-T-T-AAGCCTTT-C----TTT--TAAGGACAAATTAA-AG-T-TGGT-TGTAT-A-Tatggagtataaattg------gtagtatCTA-T-ATTC-t-acta----taat----tat---tt
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3470775 138 -   3747815 aaat---aag-tgTGTACGT-TAT-TTGCA-----C-------------CTCA-TTT-T----TTGGATTGTACCTGCAAAA-T-T-AAGCCTTT-C----TTT--TAAGGACAAATTAA-AG-T-TGGT-TGTAT-A-TAtggagtataaattg------gtagtatCTA-T-ATTC-t-acta----taat----tat---tt
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        16012 138 +     66751 AAAT---AAG-TGTGTAGGT-TAT-TTACA-----C-------------CTCA-TTT-T----TTGGATTGTACCTGCAAAA-T-T-AAGCCTTT-C----TTT--TAAGGACAAATTAA-AG-T-TGGT-TGTAT-A-TATGGAGTATAAGTTG-----GTA-GTATCTA-T-ATTC-T-ACTA----TAAT----TAT---TT
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_12795               387 128 -     87886 --------------GTTATT-CAT-TGACA-----C-------------CTCA-TTT-T----GTAGGTGAGATCTGCAAAA-T-T-AAGCCTTT-C----TTC--TTGGGACAAATTGG-AG-C-CAGT-TTTGT-A-TATGGAGTGTGAATTG---AT--AA-TGTCCA-T-ATTT-T-ATTC----TGA-------TTATTC
i Myrmecophaga_tridactyla.MyrTri_scaffold_12795         C 0 I 6
s Nannospalax_galili.KL201303.1                            125814 138 +    362372 AAAT---AGA-CATATAGCT-TAT-TAACA-----C-------------CTAA-TTT-T----ATGGTTGAGACCTACAAAA-T-T-AAGTCTTT-A----TTG--TAGGGACAAAGTGG-GG-T-TCAT-TGTGT-A-CATGGAGTGTGAATTG---AT--A-GTGTCTA-T-ATTT-T-ACTC----TGAt----gac---tt
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                              11741 138 +     48152 GAAT---AAA-GATACAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAACCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--A-GTGTCCG-T-ATTT-T-ACTC----TCAT----TAT---TT
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4492804 128 -  14209539 gaat---aaa-GATGTAGCT-TAT-TAGCA-----C-------------CTTA-TTT-T----GTGAGTTGGACCTGCAAAA-T-T-AAACCTTT-C----T----TAGGAACAAATTGA-AG-T-TAGT-TGTGT-A-TATGGAGTATAAATTG-----GTAA-TGTCCA-T-ATTT-T-CCTC----T---------------
i Neomonachus_schauinslandi.NINY01007774.1              I 200 I 4
s Neophocaena_asiaeorientalis.KZ688543.1                  3956924 125 -   4490290 GAAT---AAA-GATGTAGCT-TAT-TAACA-----C-------------CTTG-TTT-T----GTGAATTGGACGTGCAAAA-T-T-AAAGCTTT-C----TTC--CAGGGACAAATTGA-AG-T-TGGT-TGTGT-A-TATGGGGTGTAAATGA---AT--A-GTGTCCA-T-CTAA-T-------------------------
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 I 1
s Noctilio_leporinus.NocLep_scaffold_12062                  52740 138 +     94413 GAAT---AAG-GATGTAGTT-TAT-TAACA-----C-------------CTTA-TTT-T----GTAGATTATACCTACAAAA-G-T-AAACCTTT-C----TTT--TAGGGACAAATTGA-AG-T-TGGT-TGTAT-A-TTTGGAGTGTAAATTG-----GTA-GTGTCCA-T-ATTT-T-ACTC----TAAT----TAT---TT
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_762468                            1543 134 -      2755 GAAT---AAA-GATACAGCT-TAT-TAACT-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AGACCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGA-------AT--A-GTGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Nomascus_annamensis.k141_762468                       C 0 C 0
s Nomascus_concolor.k141_256540                              8153 134 -      8966 GAAT---AAA-GATACAGCT-TAT-TAACT-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AGACCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGA-------AT--A-GTGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Nomascus_concolor.k141_256540                         C 0 C 0
s Nomascus_gabriellae.k141_655641                              28 134 -      1082 GAAT---AAA-GATACAGCT-TAT-TAACT-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AGACCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGA-------AT--A-GTGTTCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Nomascus_gabriellae.k141_655641                       I 4 I 352
s Nomascus_siki_b.tarseq_2639                           11511 134 -     20157 GAAT---AAA-GATACAGCT-TAT-TAACT-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AGACCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGA-------AT--A-GTGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Nomascus_siki_b.tarseq_2639                       I 1624 I 6338
s Nomascus_siki_a.k141_421408                                  2008 134 +     16235 GAAT---AAA-GATACAGCT-TAT-TAACT-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AGACCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGA-------AT--A-GTGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                40136 129 +   3668941 gaat---aaa-gatGTAGCT-TAT-TAGCA-----G-------------TTTA-TTT-T----GTGAATTGGACCTGCAAAA-T-TTAAACCTTT-C----T----TAGGAACAAGATGA-AG-T-TAGT-TGTGT-A-CATGGAGTGTAAATTG-ACA-G----TGTCCT-T-ATTT-T-CCTC----T---------------
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 I 4
s Nycticebus_bengalensis.LG16                            65573324 122 -  95554990 GAAT---AAA-AATGCAAC--TAT-TAACA-----C-------------CTCA-TTG-T----GTTTACAATACCTGCAAAA-T-T-AAACTTTA-C----TTC--TAGGGACTAAGTGG-AG-G-TGGC-TGAGT-A-TCTGGAGTGTGAATAG---AT--A-GTGTCTA-T-ACT----------------------------
i Nycticebus_bengalensis.LG16                           C 0 I 6
s Nycticebus_coucang.k141_6040852                             960 122 +      1868 GAAT---AAA-AATGCAAC--TAT-TAACA-----C-------------CTCA-TTG-T----GTTTACAATACCTGCAAAA-T-T-AAACTTTA-C----TTC--TAGGGACTAAGTGG-AG-G-TGGC-TGAGT-A-TCTGGAGTGTGAATAG---AT--A-GTGTCTA-T-ACT----------------------------
i Nycticebus_coucang.k141_6040852                       C 0 I 6
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65681503 122 +  89412551 GAAT---AAA-AATGCAAC--TAT-TAACA-----C-------------CTCA-TTG-T----GTTTATAATACCTGCAAAA-T-T-AAACTTTA-C----TTC--TAGGGACTAAGTGG-AG-G-TGGC-TGAGT-A-TCTGGAGTGTGAATAG---AT--A-GTGTCTA-T-ACT----------------------------
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 I 6
s Ochotona_princeps.JH802095.1                            5001341 136 -  23139505 GAAT---AAA-AATACAGCT-TGT-TAACA-----C-------------CCCA-ATT-T----GTACATGGGATCTGCAAAT-T-T-AAACCTTT-T----TGC--TAGGAACATATTGG-AG-C-TAAT-TGTGT-A-AAATCAGTGTGAATTG---A-G----TGCTCA-T-ATTT-T-TCTG----TAAT----CAT---TT
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3692973 138 +  10294119 aaat---aaa-gatggAACT-TAT-TAAGA-----A-------------CACA-TTT-T----GTGCAAGAGACTTCTGAAA-T-C-AAATGTTT-C----TCC--TAGGTACAAGCCGG-CG-T-TAGT-TGTAT-A-TATGGAGTGTGAACTG---AT-T--GCATCCA-T-ATTT-T-ATTC----TAGT----TCT---TT
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             687055 127 -   3126709 gaat---aaa-GATGTAGCT-TAT-TAGCC-----C-------------CTTA-TTT-T----GTGAATTGGGCCTGCAAAA-T-T-AAACCTTT-C----T----TA-GGAAAAATTGA-AG-T-TAGT-TGTGT-A-TATGGAGTGTAAATTG-----GTA-GTGTCCG-T-ATTT-T-CCTC----T---------------
i Odobenus_rosmarus.KB229369.1                          I 215 I 4
s Odocoileus_virginianus.KZ101650.1                       1086121  90 +   1425656 gaat---aaa-tatgAAGCT-AGT-TAACA-----C-------------CTTG-TTT-T----GTGGACTGGGCCTGCAAAA-T-T-AAAGCTTT-C----TTC--TAGAGACAGATTTA-AG-T-TAGT-TGT-----------------------------------------------------------------------
i Odocoileus_virginianus.KZ101650.1                     C 0 I 37
s Okapia_johnstoni.LVCL01S0017931.1                         44190  90 +     78940 GAAT---AAA-TATGTAGCT-AGT-TAACA-----C-------------CTTG-TTT-T----GTGGACTAGACCTGCAAAA-T-T-AAAGCTTT-C----TTC--TAGAGACAGATTTA-AG-T-TAGT-TGT-----------------------------------------------------------------------
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 I 37
s Ondatra_zibethicus.OndZib_scaffold_6821                  131872 137 +    145789 -AAT---AAA-TATGCAGCT-TAT-TAACA-----C-------------CTCA-TCT-T----GTACATGAGACCTAAAAAA-C-T-AAGCCTTC-A----TTC--TAGGGACAAAGTAG-AC-T-TAGT-TGTTG-T-TGTGGAGTGTGAATTG---ATG---GTGTCCA-T-ATTT-T-ACTC----TAAT----GAC---TT
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  44813 138 +     62360 AAAT---AAA-TATGCAGCT-TAT-TAACA-----C-------------CTCA-TTT-T----GTACAGGAGACCTGAAAAA-C-T-AAGCCTTC-A----TTA--CAGAGACAAAGTGG-AG-T-TAGT-TGTTT-T-TGTGGAGTGAGAATTG---AT--A-TTGTCCA-T-ATTT-T-ACTC----TAAT----GAC---TT
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7230598 125 -   7562323 GAAT---AAA-GATGTAACT-TAT-TAACA-----C-------------CTTG-TTT-T----GTGAATTGGACGTGCAAAA-T-T-AAAGCTTT-C----TTC--CAGGGACAAATTGA-AG-T-TGGT-TGTGT-A-TATGGGGTGTAAATGA---AT--A-GTGTCCA-T-CTAA-T-------------------------
i Orcinus_orca.KB316965.1                               C 0 I 1
s Orycteropus_afer.OryAfe_flattened_line_371885              1807 138 +      3658 GAAT---AAA-GATATAGCT-CAT-TAGCA-----C-------------CTCA-TAT-T----ATGGATGAGACCTGCAAAA-T-T-AAACCTTT-C----TTT--CTGGTACAAATTGG-TG-T-TAGT-TGTGT-A-TATAGTGTGTGAATTG---AT-T---TGCACA-T-ATTT-T-ATCC----TAAT-A--TAT---TC
i Orycteropus_afer.OryAfe_flattened_line_371885         C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141885362  75 + 163896628 -----------------------------------------------------------------------------------------------------TGC--TATGAACAAATTGG-AG-T-TGGT-TGTGT-A-AATGGAGTGTGAATTG-----GTA-GTGTACA-T-ATTT-C-ACTC----TAAT----TAG---TT
i Oryctolagus_cuniculus.CM000803.1                      I 63 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      317268 129 -    505867 gaat---aaa-gatGTAGCT-TAT-TAGCA-----G-------------TTTA-TTT-T----GTGAATTGGACCTGCAAAA-T-TTAAACCTTT-C----T----TAGGAACAAGATGA-AG-T-TAGT-TGTGT-A-TATGGAGTGTAAATTG-ACA-G----TGTCCA-T-ATTT-T-CCTC----T---------------
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 I 4
s Otolemur_crassicaudatus.k141_505435                        6445 125 -     53940 GAAT---GAA-AATGTAAC--TAT-TAACA-----C-------------CTCA-TTG-T----GTTTATAATACCTGCAAAA-T-T-AAACTTTA-C----TTC--TAGGGACAAAGTAG-AG-T-TAGC-TGTGT-A-TCTGGAGTGCGAACAG---AT--A-GTGTCTA-T-ACTT-T-A-----------------------
i Otolemur_crassicaudatus.k141_505435                   C 0 I 7
s Otolemur_garnettii.GL873528.1                          18014410 125 -  38779656 GAAT---GAA-AATGTAAC--TAT-TAACA-----C-------------CTCA-TTG-T----GTTTATAATACCTGCAAAA-T-T-AAACTTTA-C----TTC--TAGGGACAAAGTAG-AG-T-TAGC-TGTGT-A-TCTGGAGTGCGAACAG---AT--A-GTGTCTA-T-ACTt-t-a-----------------------
i Otolemur_garnettii.GL873528.1                         C 0 I 7
s Ovis_aries.CM001582.2                                 134085339  90 - 275406953 gaat---aaa-tatgaAGCT-AGT-TAACA-----C-------------TTTG-TTT-T----GTGGACTGGACCTGCAAAA-T-T-AAAGCTTT-C----TTC--TAGAAACAGATTTA-AG-T-TAGT-TGT-----------------------------------------------------------------------
i Ovis_aries.CM001582.2                                 C 0 I 37
s Ovis_canadensis.OviCan_scaffold_6251                      86585  90 +    140051 GAAT---AAA-TATGAAGCT-AGT-TAACA-----C-------------TTTG-TTT-T----GTGGACTGGACCTGCAAAA-T-T-AAAGCTTT-C----TTC--TAGAGACAGATTTA-AG-T-TAGT-TGT-----------------------------------------------------------------------
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 I 37
s Pan_paniscus.CM003386.1                               127579823 137 - 205426864 GAAT---AAA-GATACAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGACGAGACCTGAaaaa-t-t-aaaccttt-c----ttc--tAGAGACAAGTTGG-AG-T-TAGT-TGTGT-A-TATAGAGTGTG-ATAG---AT--A-GTGTCCA-T-ATTT-T-AGTG----TCAT----TAT---TT
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120156983 138 - 196562556 GAAT---AAA-GATACAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGACGAGACCTGaaaaa-t-t-aaaccttt-c----ttc--taGAGACAAGTTGG-AG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--A-GTGTCCA-T-ATTT-T-AGTG----TCAT----TAT---TT
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  42030 128 +    295523 GAAT---AAA-GATGTAGCT-TAT-TAGCA-----C-------------CTTA-TTT-T----GTGGATCAGACCTGCAAAA-T-T-AAATCTTT-C----T----TAGGGACAGATTGA-AG-T-CAGT-TGTGT-A-TATGGAGCGTAAATTG---AT--A-GTGTACA-T-ATTT-T-CCTC----T---------------
i Panthera_onca.PanOnc_flattened_line_1615              C 0 I 4
s Panthera_pardus.KV860323.1                              3645844 128 +  18214204 GAAT---AAA-GATGTAGCT-TAT-TAGCA-----C-------------CTTA-TTT-T----GTGGATCAGACCTGCAAAA-T-T-AAATCTTT-C----T----TAGGGACAGATTGA-AG-T-TAGT-TGTGT-A-TATGGAGCGTAAATTG---AT--A-GTGTACA-T-ATTT-T-CCTC----T---------------
i Panthera_pardus.KV860323.1                            C 0 I 4
s Panthera_tigris.KE721879.1                              5035481 128 -   6340057 GAAT---AAA-GATGTAGCT-TAT-TAGCA-----C-------------CTTA-TTT-T----GTGGATCAGACCTGCAAAA-T-T-AAATCTTT-C----T----TAGGGACAGATTGA-AG-T-TAGT-TGTGT-A-TATGGAGCGTAAATTG---AT--A-GTGTACA-T-ATTT-T-CCTC----T---------------
i Panthera_tigris.KE721879.1                            C 0 I 4
s Pantholops_hodgsonii.KE114631.1                         1074224  90 -   1292953 gaat---aaa-tatgaAGCT-AGT-TAACA-----C-------------TCTG-TTT-T----GTGGACTGGACCTGCAAAA-T-T-AAAACGTT-C----TTC--TAGAGACAGATTTA-AG-T-TAAT-TGT-----------------------------------------------------------------------
i Pantholops_hodgsonii.KE114631.1                       C 0 I 37
s Papio_anubis.CM001492.2                               188161723 138 - 188283584 gaat---aaa-GATGCAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATAAGACCTGaaaaa-t-t-aaaccttt-c----ttc--taGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              4813 138 +     25005 GAAT---AAA-GATGCAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATAAGACCTGAAAAA-T-C-AAACCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47519095 138 +  47705337 GAAT---AAA-GATGCAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATTAGACCTGAAAAA-T-T-AAACCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 73086 138 -    104429 GAAT---AAA-GATGCAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATAAGACCTGAAAAA-T-T-AAACCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   11618 138 +     14967 GAAT---AAA-GATGCAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATTAGACCTGAAAAA-T-T-AAACCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_899489                                   288 138 -     13896 GAAT---AAA-GATGCAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATAAGACCTGAAAAA-T-T-AAACCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Papio_ursinus.k141_899489                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    123559  65 -    135482 -----------------------------------------------------------------------------------------------------T----TAGGGATAAATTGA-AG-T-TAGT-TGTGT-A-TATGGAGTGTAAATTG---AT--A-GTGTCCA-T-ATTT-T-CCTC----T---------------
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 I 62 I 4
s Perodicticus_ibeanus.k141_117958                          12109 120 -     23713 GAGT---AAA-AAT-------TAT-TAACA-----C-------------CTCA-TTG-T----GTTTATAATACCTGCAAAA-T-T-AAACTTTA-C----TTC--TAGGGACAAAATGG-AG-T-TAGC-TGTGT-A-TCTGGAGTGTGAATAG---AT--A-GTGTCTA-T-ACTT-T-A-----------------------
i Perodicticus_ibeanus.k141_117958                      C 0 I 3
s Perodicticus_potto.k141_1136815                           13260 120 +     61070 GATT---AAA-AAT-------TAT-TAACA-----C-------------CTCA-TTG-T----GTTTATAATACCTGCAAAA-T-T-AAACTTTA-C----TTC--TAGGGACAAAATGG-AG-T-TAGC-TGTGT-A-TCTGGAGTGTGAATAG---AT--A-GTGTCTA-T-ACTT-T-A-----------------------
i Perodicticus_potto.k141_1136815                       C 0 I 3
s Perognathus_longimembris.PerPac_flattened_line_19359       3524 132 +     49596 GAAT---AAACAATACAGCT-TAT-TAACA-----C-------------CTCA-TTA-TGTACATGACTGAGATATACAAAA-T-T-AATCCCTC-C----TTG--TACAGTTCAATTGG-AG-T-AAAT-TGTGT-A-TTTGGAGTGTGAATTG---AT--A-GTGTCCA-T-GCCT-T-AA----------------------
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 I 6
s Peromyscus_maniculatus.KI615458.1                       2840626 138 -   3366660 aaat---aaa-tatgcaGCT-TAT-TAACA-----C-------------CTCA-TTT-T----GTACATGGGACCTGAAAAA-C-T-AAGCCTTC-A----TTA--TAGAGACAAAGTGG-AG-T-TAGT-TGTTT-T-TGTGGAGTGCAAATTG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TAAT----GAT---TT
i Peromyscus_maniculatus.KI615458.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    19443  75 -     36578 -----------------------------------------------------------------------------------------------------TTC--TAGGGATAAATTGG-AG-T-TAGT-TGTAT-G-CATGGAGTGTGAATTG---AT-TA--TGTCCA-T-ATTT-T-ATTC----TTAT----TAT---TT
i Petromus_typicus.PetTyp_scaffold_33007                I 47 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              5061 125 +      8220 GAAT---AAA-GATGTAGCT-TAT-TAACA-----C-------------CTTG-TTT-T----GTGAATTGGACGTGCAAAA-T-T-AAAGCTTT-C----TTC--CAGGGACAAATTGA-AG-T-TGGT-TGTGT-A-TATGGGGTGTAAATGA---AT--A-GTGTCCA-T-CTAA-T-------------------------
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 I 1
s Piliocolobus_badius.k141_1987485                           5281 138 -      5908 GAAT---AAA-GACACAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAACCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       5900 138 -     17985 GAAT---AAA-GATACAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAACCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            5267 138 +      7694 GAAT---AAA-GATACAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAACCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26743750 138 +  26888534 GAAT---AAA-GATACAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGaaaaa-t-t-aaaccttt-c----ttc--taGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306           101508 138 +    112873 AAAT---AAG-GGTATAGGT-TAT-TAACA-----C-------------CTCA-TAT-T----TTGGATTGTACCTGCAAAA-T-T-AAGCCTTT-C----TTT--TAAGGACAAATTAA-AG-T-TGGT-TGTAT-A-TATGGAGTATAAATTG-----GTA-GTATCCA-T-ATTC-T-ACTA----TAAT----TAT---TT
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990          11558 125 +     21690 GAAT---AAA-GATGTAGCT-TAT-TAACA-----C-------------CTTG-TTT-T----GTGGATTGGACGTGCAAAA-T-T-AAAGCTTT-C----TTC--CAGGGACAAATTGA-AG-T-TGGT-TGTGT-A-TATGGGGTGTAAATGA---AT--A-GTGTCCA-T-CTAA-T-------------------------
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 I 9
s Plecturocebus_bernhardi.k141_959214                       27388 131 +     44506 GAAT---AAA-GATATAGCT-TAT-TAACA-----C-------------TTAA-TTC-T----GTGGATGAGACCTCAAAAA-T-T-AAACCATT-T----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTTT-A-TATAGAGTATGA-------AT--A-GTGTCCA-T-ATTT-T-ACTC----TTAT----TA------
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        27601 131 +     67491 GAAT---AAA-GATATAGCT-TAT-TAACA-----C-------------TTCA-TTC-T----GTGGATGAGACCTCAAAAA-T-T-AAACCATT-T----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTTT-A-TATAGAGTATGA-------AT--A-GTGTCCA-T-ATTT-T-ACTC----TTAT----TA------
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      17840 131 -     98129 GAAT---AAA-GATATAGCT-TAT-TAACA-----C-------------TTCA-TTC-T----GTGGATGAGACCTCAAAAA-T-T-AAACCATT-T----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTTT-A-TATAGAGTATGA-------AT--A-GTGTCCA-T-ATTT-T-ACTC----TTAT----TA------
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     27441 131 +    147771 GAAT---AAA-GATATAGCT-TAT-TAACA-----C-------------TTCA-TTC-T----GTGGATGAGACCTCAAAAA-T-T-AAACCATT-T----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTTT-A-TATAGAGTATGA-------AT--A-GTGTCCA-T-ATTT-T-ACTC----TTAT----TA------
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         4076 131 -     43940 GAAT---AAA-GATATAGCT-TAT-TAACA-----C-------------TTCA-TTC-T----GTGGATGAGACCTCAAAAA-T-T-AAACCATT-T----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTTT-A-TATAGAGTATGA-------AT--A-GTGTCCA-T-ATTT-T-ACTC----TTAT----TA------
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          8159 131 -     55515 GAAT---AAA-GATATAGCT-TAT-TAACA-----C-------------TTCA-TTC-T----GTGGATGAGACCTCAAAAA-T-T-AAACCATT-T----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTTT-A-TATAGAGTATGA-------AT--A-GTGTCCA-T-ATTT-T-ACTC----TTAT----TA------
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         27513 131 +    152463 GAAT---AAA-GATATAGCT-TAT-TAACA-----C-------------TTCA-TTC-T----GTGGATGAGACCTCAAAAA-T-T-AAACCATT-T----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTTT-A-TATAGAGTATGA-------AT--A-GTGTCCA-T-ATTT-T-ACTC----TTAT----TA------
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       5317 131 -    119457 GAAT---AAA-GATATAGCT-AAT-TAACA-----C-------------TTCA-TTC-T----GTGGATGAGACCTCAAAAA-T-T-AAACCATT-T----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTTT-A-TATAGAGTATGA-------AT--A-GTGTCCA-T-ATTT-T-ACTC----TTAT----TA------
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         17235 131 +    134592 GAAT---AAA-GATATAGCT-TAT-TAACA-----C-------------TTCA-TTC-T----GTGGATGAGACCTCAAAAA-T-T-AAACCATT-T----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTTT-A-TATAGAGTATGA-------AT--A-GTGTCCA-T-ATTT-T-ACTC----TTAT----TA------
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          27823 131 -     75465 GAAT---AAA-GATATAGCT-TAT-TAACA-----C-------------TTCA-TTC-T----GTGGATGAGACCTCAAAAA-T-T-AAACCATT-T----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTTT-A-TATAGAGTATGA-------AT--A-GTGTCCA-T-ATTT-T-ACTC----TTAT----TA------
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              192454 138 -    373494 GAAT---AAA-GATACAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAaaaa-t-t-aaaccttt-c----ttc--tAGAGATAAGTTGG-AG-T-TAGT-AGTGT-A-TATAGAGTGTGAATAG-ACA-G----TGTCCA-T-ATTT-T-ACTG----TCAT----TAT---TT
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19813103 138 +  19899266 GAAT---AAA-GATACAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAACCTTT-G----TTC--TAGAGATAAGTTGG-AG-T-TAGT-AGTGT-A-TATAGAGTGTGAATAG-ACA-G----TGTCCA-T-ATTT-T-ACTG----TCAT----TAT---TT
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               9023 138 -     15069 GAAT---AAA-GATACAGCC-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCGGAAAAA-T-T-AAACCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TGTAGAGTGTGAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              9138 138 +     14865 GAAT---AAA-GATACAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCGGAAAAA-T-T-AAACCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--A-GTGTCCG-T-ATTT-T-ACTC----TCAT----TAT---TT
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                6143 138 -      9567 GAAC---AAA-GATGTAACT-CAT-TAGTG-----C-------------TTCA-TTT-T----GTGGCTGAGGCCAGAAAAA-A-T-AAATCTTT-C----TTT--TTAGAACAAATTGG-CA-T-TTGT-TGTGT-A-TATAGAGTGTGAATTGTT-A-G----TGTCCA-T-ATTT-T-ACTC----TAAT----TAT---TC
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6854059 138 +  12164890 GAAT---AAA-GATGTAGCT-TAT-TAACA-----C-------------CTCA-TTT-T----GTGGATGAAACCTGCAAAA-T-T-AAACCTTT-C----TTC--TAGGGACAAAGTGG-AG-T-CAGC-TGTAT-A-CACGGAGTGTGAATAC---AT--A-GTGTCCA-T-ATTT-T-ACTC----TAAA----TAT---TT
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147863.1                     22860  92 -     30946 GAAT---AAA-GATGTAGTT-CAT-TAACA-----C-------------CTCA-TTT-T----GTGGATGAAACCTGCAAAA-T-T-AAACCTTT-C----TTC--TAGGGACAAAGTGG-AG-T-TAGC-TGTGT---------------------------------------------------------------------
i Propithecus_coquerelli.NW_012147863.1                 C 0 n 0
s Propithecus_coronatus.k141_1353159                         9161 137 +     11805 GAAT---AAA-GATGTAGCT-CAT-TAACA-----C-------------CTCA-TTT-T----GTGGATGAAACCTGCAAAA-T-T-AAACCTTT-C----TTC--TG-GGACAAAGTGG-AG-T-TAGC-TGTGT-A-TATGGAGTGCGAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TAAA----TAT---TT
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           48495 138 +     52369 GAAT---AAA-GATGTAGCT-CAT-TAACA-----C-------------CTCA-CTT-T----GTGGTTGAAACCTGCAAAA-T-T-AAACCTTT-C----TTC--TAGGGACAAAGTGG-AG-T-TAGC-TGTGT-A-TACGGAGTGCGAATAG---AT--A-GTGGCCA-T-ATTT-T-ACTC----TAAA----TAT---TT
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         40882 138 -     44753 GAAT---AAA-GATGTAGCT-CAT-TAACA-----C-------------CTCA-TTT-T----GTGATTGAAACCTGCAAAA-T-T-AAACCTTT-C----TTC--TAGGGACAAAGTGG-AG-T-TAGC-TGTGT-A-TACAGAGTGAGAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TAAA----TAT---TT
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            22805 138 +     27322 GAAT---AAA-GATGTAGCT-CAT-TAACA-----C-------------CTCA-TTT-T----GTGGTTGAAACCTGCAAAA-T-T-AAACCTTT-C----TTC--TAGGGACAAAGGGG-AG-T-TAGC-TGTGT-A-TACGGAGTGCGAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TAAA----TAT---TT
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       22451 138 -     53241 GAAT---AAA-GATGTAGCT-CAT-TAACA-----C-------------CTCA-TTT-T----GTGGATGAAACCTGCAAAA-T-T-AAACCTTT-C----TTC--TAGGGACAAAGTGG-AG-T-TAGC-TGTGT-A-TAGGGAGTGCGAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TAAA----TAT---TT
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         44714 138 -     48185 GAAT---AAA-GATGTAGCT-CAT-TAACA-----C-------------CTCA-TTT-T----GTGGATGAAACCTGCAAAA-T-T-AAACCTTT-C----TTC--TAGGGACAAAGTGG-AG-T-TAGC-TGTGT-A-TACGGAGTGCGAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TAAA----CAT---TT
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           40439 138 +     77221 aaat---aaa-tacgCAGCT-TAT-TAACA-----C-------------CTCG-TTT-T----GTACATGAGACCTGAAAAA-T-T-AAGCCTTC-A----TTA--TAGTGACAAAATGG-AG-T-TAGT-TGGTT-T-CGCGGAGTGTGAATTA---AT--A-GTGTCCA-T-ATTT-T-ATTC----AAAT----GAC---TT
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            8088 138 -     27784 GAAT---AAG-GATGTAGTT-TAT-TAACA-----C-------------CTTA-TTT-T----GTGGATTGTACCAGCAAAA-T-T-AAACCTTT-C----TTT--TAGGGACAAATTTG-AG-T-TGGT-TGTAT-A-Tttggagtataaattg------gtagtgtcca-t-attt-t-actc----taaa----tat---tt
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        252405 128 -    344369 AAAT---AAA-GATGTAGCT-TAT-TAGCA-----C-------------CTTA-TTT-T----GTGAATTGGACCTGCAGAA-T-G-AAACCTTT-C----T----TAGGAACAAATTGA-AG-T-TAGT-TGTGT-A-TATGGAGTGTAAATTG---AT--A-GTGTCCA-T-GTTT-T-CCTC----T---------------
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 I 4
s Pteropus_alecto.KB031157.1                             13249057 138 -  17261082 GAAT---AAG-GATGTATCT-TAT-TAACA-----T-------------CTCA-TTT-C----TGGGATTGTATCtgcaaaa-t-a-aaaccttt-c----ttc--tAGGGATAAATTGA-AG-T-TGGT-TGTAT-A-TATGGAGTATAAGTTG-----GTA-GAGTCCA-G-ATTT-T-ACTc----taat----tat---tt
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             607007 138 -   3946241 GAAT---AAG-GATGTATCT-TAT-TAACA-----T-------------CTCA-TTT-C----TGGGATTGTATCTgcaaaa-t-a-aaaccttt-c----ttc--TAGGGATAAATTGA-AG-T-TGGT-TGTAT-A-TATGGAGTATAAGTTG-----GTA-GAGTCCA-G-ATTT-T-ACTC----Taac----tat---tt
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131542175 128 - 161321710 GAAT---AAA-GATGTAGCT-TAT-TAGCA-----C-------------CTTA-TTT-T----GTGGATCAGACCTGCAAAA-T-T-AAATCTCT-C----T----TAGGGACAGATTTA-AG-T-TAGT-TGTGT-A-TATGGAGCATAAATTG---AT--A-GTGTACA-T-ATTT-T-CCTC----T---------------
i Puma_concolor.QAVW01000427.1                          C 0 I 4
s Pygathrix_cinerea.k141_374971                             33129 138 +     56732 GAAT---AAA-GATACAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTAAAAAA-T-T-AAACCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--A-GTGTCCG-T-ATTT-T-ACTC----TCAT----TAT---TT
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6809626 138 +   6970761 GAAT---AAA-GATACAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAACCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--A-GTGTCCG-T-ATTT-T-ACTC----GCAT----TAT---TT
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             9015 138 +     18040 GAAT---AAA-GATACAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAACCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--A-GTGTCCG-T-ATTT-T-ACTC----GCAT----TAT---TT
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                22969  90 +     68503 GAAT---AAA-TATGAAGCT-AGT-TAACA-----C-------------CTTG-TTT-T----GTGGACTGGGCCTGCAAAA-T-T-AAAACTTT-C----TTC--CAGAGACAGATTTA-AG-T-TAGT-TGT-----------------------------------------------------------------------
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 I 37
s Rattus_norvegicus.chr11                                13920830 138 +  90463843 aaag---aaa-tacACAGCT-TAT-CAACA-----C-------------CTTG-TTT-T----CTACACGGGACCTGAAATA-T-T-AAGCCTTC-A----TTA--TAGGGACAGAGTGG-AG-T-CAGT-TGTTT-T-TGAGGAGTGTGAATTG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TAAT----GAC---TT
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1794889 138 +   2252614 GAAT---AAA-GATGTAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGACGGCACCTGCAAAA-T-G-AAACCTTT-C----TTG--TAGAGACAAATTGA-AG-T-TGGT-TGTGT-G-TATGGAGTGTAAATTG-----GTA-GTGTCCA-T-ATTT-T-ACTC----taat----tat---tt
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                            3394 138 -     17045 GAAT---AAA-GATACAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAACCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--A-GTGTCCG-T-ATTT-T-ACTC----TCAT----TAT---TT
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206380881 138 - 206558726 GAAT---AAA-GATACAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTgaaaaa-t-t-aaaccttt-c----ttc--taGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--A-GTGTCCG-T-ATTT-T-ACTC----TCAT----TAT---TT
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44859784 138 -  45163003 GAAT---AAA-GATACAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAACCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--A-GTGTCCG-T-ATTT-T-ACTC----TCAT----TAT---TT
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                22401 138 +    109198 GAAT---AAG-GATGTATCT-TAT-TAACA-----T-------------CTCA-TTT-T----TGGGATTGTATCTGCAAGA-T-C-AAACCTTT-C----TTC--TAGGGATAAATTGA-AG-T-TGGT-TGTGT-A-TATGAAGCATAAGTTT-----GTA-GAGTCCA-G-ATTT-T-ACTT----TAAT----TAT---TT
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                      3852  90 -      4338 GAAT---AAA-TATGAAGCT-AGT-TAACA-----T-------------TTTG-TTT-T----GTGGACTGGACCTGAAAAA-T-T-AAAGCTTT-C----CTC--TAGAGACAGTTTTA-AG-T-TAGT-TAT-----------------------------------------------------------------------
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 I 37
s Saimiri_boliviensis.NW_024100938.1                     15677834 132 -  43202129 aaat---aaa-gatatagcg-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGAcctgaaaaaat-t-aaatcttt-c----ttC--TAGAGACAAGTTG--GGAT-TAGT-TGTGC-A-TATAGACTATGAATAG----------TGTCCA-T-ATTT-G-ACTC----TTAT----TA------
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        9748 132 +     34089 AAAT---AAA-GATATAGCG-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAAAT-T-AAATCTTT-C----TTC--TAGAGACAAGTTG--GGAT-TAGT-TGTGC-A-TATAGACTATGAATAG----------TGTCCA-T-ATTT-G-ACTC----TTAT----TA------
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              9687 132 -     60842 AAAT---AAA-GATATAGCG-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAAAT-T-AAATCTTT-C----TTC--TAGAGACAAGTTG--GGAT-TAGT-TGTGC-A-TATAGACTATGAATAG----------TGTCCA-T-ATTT-G-ACTC----TTAT----TA------
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              9781 132 +     67014 AAAT---AAA-GATATAGCG-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAAAT-T-AAATCTTT-C----TTC--TAGAGACAAGTTG--GGAT-TAGT-TGTGC-A-TATAGACTATGAATAG----------TGTCCA-T-ATTT-G-ACTC----TTAT----TA------
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              9758 132 +     60816 AAAT---AAA-GATATAGCG-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAAAT-T-AAATCTTT-C----TTC--TAGAGATAAGTTG--GGAT-TAGT-TGTGC-A-TATAGACTATGAATAG----------TGTCCA-T-ATTT-G-ACTC----TTAT----TA------
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 9695 132 -     76454 AAAT---AAA-GATATAGTG-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAAAT-T-AAATCTTT-C----TTC--TAGAGACAAGTTG--GGAT-TAGT-TGTGC-A-TATAGACTATGAATAG----------TGTCCA-T-ATTT-G-ACTC----TTAT----TA------
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17346466 131 -  30362882 GAAT---AAA-GATATAGCT-TAT-TAACA-----C-------------CTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAATCTTT-C----TTC--TAGTGACAAGTTG--GGAT-TAGT-TGTGC-A-TATAGAGTATGAATAG----------TGTCCA-T-ATTT-T-ACTC----TTAC----TA------
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         25787 131 -     62485 GAAT---AAA-GATATAGCT-TAT-TAACA-----C-------------CTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAATCTTT-C----TTC--TAGTGACAAGTTG--GGAT-TAGT-TGTGC-A-TATAGAGTATGAATAG----------TGTCCA-T-ATTT-T-ACTC----TTAC----TA------
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   41685 134 -    114521 --AT---AAA-CATGTTGCT-TAT-TACAA-----C-------------CTCA-TTT-T----GTGGATTGGACCTGCAAAA-T-T-AAAGCTTT-T----TTC--TAGGTACAAATTGA-AG-G-CAGT-TGTAT-A-TACTGAGTGTGAATTC---AT--A-TGTCCCA-T-GTTT-G-AC------TAAT----TAT---TT
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        6630 138 +     15331 GAAT---AAA-GATACAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAACCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--AA-TGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      12005 138 +     20762 GAAT---AAA-GATACAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAACCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--AA-TGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         122009 138 +    130994 GAAT---AAA-GATACAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAACCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--AA-TGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           40789 138 +     46263 GAAT---AAA-GATACAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAACCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--AA-TGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     33934 138 +     42640 GAAT---AAA-GATACAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAACCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--AA-TGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        16956 138 +     30600 GAAT---TAA-GATACAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAACCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--AA-TGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  106990 138 -    120886 AAAG---AAA-TATGCAGCT-TAT-TAACA-----C-------------CTCA-TTT-T----GTACAGGAGACCTGAAAAA-C-T-AAGCCTTC-A----TTA--TAGGGACAAAGTAC-AG-T-TGGT-TGTTT-T-TGTGGAGTGTAAATTG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TAAT----GAC---CT
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            26329 138 +    739146 AAAT---AAA-TACGTAGCT-TAT-TAACA-----C-------------CTAA-TTC-T----GTGAATGGTAC-TTCAAAA-T-T-AAACCTTT-C----TTT--TAAGGACATATTAA-AG-T-TAGT-TGTAT-A-TGTAGAGTGTGAATTG---AT--A-GTGTCCA-T-ATTT-T-ACTG----TAAT--T-TAT---TT
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17776659 136 -  27805282 GAAG---AAA-GATGTTGCT-TAT-TAACA-----C-------------CTCA-TTT-T----GTTAATTGAACCTGTAAAA-T-T-AAACCTTT-C----TTG--CAGGGACAAATTCA-AG-T-TAGT-AATAA-A-TATGGAGTGTAAATTGTTCATGTAAGTGTTCA-T-GTTT-T-ACTC----T---------------
i Sorex_araneus.JH798170.1                              C 0 I 6
s Spermophilus_dauricus.KZ294190.1                        2245343 125 +   2842873 aaat---aaa-tttgtagcT-TAT-TAACA-----C-------------CTCC-TTT-T----GTGGATGAGACCTGCAAAA-G-T-CAACCTTT-C----TTT--TAGAGACAAATTGG-AT-T-TAAT-TGGAT-A-TATGGAGTGTG--------AT--A-GTGTCCA-T-ATTT-T-ACTC----T---------------
i Spermophilus_dauricus.KZ294190.1                      C 0 I 4
s Spilogale_gracilis.SpiGra_flattened_line_905             241174 129 -    276980 GAAT---AAA-GATGTAGCT-TAT-TAGCA-----C-------------CTTA-TTT-T----GTGAATTGGACCTGAAAAA-T-T-AAACCTTT-C----T----TAGGAACAAATTGA-AG-T-TAGT-CATGT-A-TATGTAGTGTAAATTG---AT--A-GTGTCCA-TTATCT-T-CCTC----T---------------
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 I 4
s Suricata_suricatta.SurSur_flattened_line_20339            35373  62 +     62062 GAAT---AAA-GATGTAGCT-TAT-TAGCA-----C-------------CTTA-TTT-T----GTGGATCAGACCTGCAAAA-T-T-AAATCTTT--------------------------------------------------------------------------------------------------------------
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 I 69
s Sus_scrofa.CM000824.4                                 189277362 129 + 218635234 gaat---aaa-gatgTAGCT-TAT-TAGCA-----C-------------CTTG-TGT-T----GTGATTTGGAccagcaaaa-t-t-aaaatttt-c----ctc--cAGGGACAAATTGA-AG-T-TAGC-TGTAT-A-CATAGAGTGTAAATTG-ACA-G----TGTCCA-T-GTTT-T-ACCc--------------------
i Sus_scrofa.CM000824.4                                 C 0 I 5
s Symphalangus_syndactylus.tarseq_24                        20130  75 -  13920577 GAAT---AAA-GATACAGCT-TTT-TAACT-----C-------------TTCA-TTT-T----GTGGATGAGACCGGAAAAA-T-T-AGACCTTT-C----TTC--TAGAGACAG------------------------------------------------------------------------------------------
i Symphalangus_syndactylus.tarseq_24                    C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                4353 138 +     20549 GGAT---AGG-GATGTAGCT-TAT-TAACA-----C-------------CTCA-TTG-T----GTGGATTGTACCTGCAAAA-T-T-AAACCTTT-C----TTT--TAGGGACAAATTGC-AG-T-TGAT-TGTAC-A-TATGGAGTGTAAACTA-----GTA-GTGTCCA-T-ATTT-T-ACTT----TAAT----TAT---TT
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               18620 128 +     45698 --------------GTTATT-CAT-TGACA-----C-------------CTCA-TTT-T----GTAGGTGAGATCTGCAAAA-T-T-AAGCCTTT-C----TTC--TTGGGACAAACTGG-AG-C-CAGT-TTTGT-A-TATGGAGTGTGAATTG---AT--AA-TGTCCA-T-ATTT-T-ATTC----TGA-------TTATTC
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      812961 139 +   1148477 CAAT---CAA-GATGTAGCT-TAT-TAACA-----C-------------CTCG-TCT-T----GTGGATTGCACCTGGAAAA-T-T-AAACCTTTTT----TTC--TAGGGACAAATTGA-AG-A-TAGC-TGTGT-A-TATGGAGTGTAAATTG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TAAT----TAT---TT
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  63603 139 +     99546 CAAT---CAA-GCTGTAGCT-TAT-TAACA-----C-------------CTCG-TCT-T----GTGGATTGCACCTGGAAAA-T-T-AAACCTTTTT----TTC--TAGGGACAAATTGA-AG-A-TAGC-TGTGT-T-TATGGAGTGTAAATTG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TAAT----TAT---TT
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194013256 138 - 194193292 gaat---aaa-GATGCAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATAAGACCTGaaaaa-t-t-aaaccttt-c----ttc--taGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--A-GTGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                  1791 133 -      3104 GAAT---AAA-GATGTAGCT-CAT-TTACA-----C-------------CCCA-TTT-T----GTGGATGAGATCTGCAAAA-T-T-AAGCCTTT-C----TTC--CTGGGACAAATTGG-AG-T-CAGT-TATGT-T-TATAGAG--TGAATTG---AT--A-GTGTACC-T-ATTT-T-ACTC----TGA-------T---TT
i Tolypeutes_matacus.TolMat_scaffold_475685             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  140096 138 -    259118 GAAT---AAG-GATGCAGTT-TAT-TGACA-----C-------------CTCA-TTT-T----GTGGATTGTACCTGCAAAA-T-T-AAACCTTT-C----TTT--TAGGGACAAATTGA-AG-T-TGGT-TGTAT-A-TTTGGAGGGTAAATTG-----GTAA-TATCTG-T-ATTT-T-ACTC----TAAT----TAT---TT
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        30277 138 +     38948 GAAT---AAA-GATACAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAACA-T-T-AAACCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--AA-TGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   23837 138 -     32910 GAAT---AAA-GATACAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAACCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--AA-TGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      5738 138 -     12939 GAAT---AAA-GATACAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAACA-T-T-AAACCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--AA-TGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       5166 138 -     14244 GAAT---AAA-GATACAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAACCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--AA-TGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           46559 138 -     54611 GAAT---AAA-GATACAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAACCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--AA-TGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        4360 138 -     11566 GAAT---AAA-GATACAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAACA-T-T-AAACCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--AA-TGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     6544 138 -     15592 GAAT---AAA-GATACAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAACCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--AA-TGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          5196 138 +     14371 GAAT---AAA-GATACAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAACCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--AA-TGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   3482 138 +     12481 GAAT---AAA-GATACAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAACCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--AA-TGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        3463 138 -     24393 GAAT---AAA-GATACAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAACCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--AA-TGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       8607 138 -     28054 GAAT---AAA-GATACAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAACCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--AA-TGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44663391 138 -  44834318 GAAT---AAA-GATACAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAACCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--AA-TGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       5703 138 +     13828 GAAT---AAA-GATACAGCT-TAT-TAACA-----C-------------TTCA-TTT-T----GTGGATGAGACCTGAAAAA-T-T-AAACCTTT-C----TTC--TAGAGACAAGTTGG-GG-T-TAGT-TGTGT-A-TATAGAGTGTGAATAG---AT--AA-TGTCCA-T-ATTT-T-ACTC----TCAT----TAT---TT
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                  11135  94 +     90398 GAATGAAAAA-GATGTAGCC-TGT-TAACA-----C-------------CTGG-TTT-T----GTGGACTGGACCTACAAGA-TTT-AAGGCTTT-C----TTC--CAGAGACAAATTGA-AG-T-TAGT-TGT-----------------------------------------------------------------------
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 I 33
s Trichechus_manatus.JH594618.1                          16091668 138 +  31416278 GAAT---AAA-GATGTAACT-CAT-TAACA-----C-------------CTCA-TTT-T----GTGGATGAGACCTGCAAAA-T-T-AAACCTTT-C----TTT--TTGGGACAAATTGG-GG-T-TAGT-TGTGT-A-TATGGAGTGTGAAGTA---AT--A-GTGTCCA-T-ATTT-T-ACTC----TAAT----TAT---TT
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2802404 113 -   3938065 -----------------------------------t-------------ccca-ttt-t----gtagatgaggccTACAAAA-T-T-AAACCTTT-C----TTC--TAAGGACAAATTGG-AG-T-TAGT-TGTGT-A-TATTGAGATGGAGTTA---AT--A-GTGTCCA-T--TTT-C-ACTT----TCAT----TAT---TT
i Tupaia_chinensis.KB320831.1                           I 13 C 0
s Tupaia_tana.TupTan_flattened_line_68454                   11228 113 +     13056 -----------------------------------C-------------CCCA-TTT-T----GTAGATGAGGCCTACAAAA-T-T-AAACCTTT-C----TTC--TACAGACAAATTGG-AG-T-TAGT-TGTGT-A-TATTGACATGGAGTTA---AT--A-GTGTCCA-T--TTT-C-ACTT----TCAT----TAT---TT
i Tupaia_tana.TupTan_flattened_line_68454               I 13 C 0
s Tursiops_truncatus.MRVK01000923.1                      69319328 125 -  96451834 GAAT---AAA-GATGTAGCT-TAT-TAACA-----C-------------CTTG-TTT-T----GTGAATTGGACGTGCAAAA-T-T-AAAGCTTT-C----TTC--CAGGGACAAATTGA-AG-T-TGGT-TGTGT-A-TATGGGGTGTAAATGA---AT--A-GTGTCCA-T-CTAA-T-------------------------
i Tursiops_truncatus.MRVK01000923.1                     C 0 I 1
s Uropsilus_gracilis.UroGra_scaffold_4115                    2100  66 +    136657 ------------------------------------------------------------------------------------------------------------GAGATGAATTG-------TAGT-TGTAT-A-TCTGGAGTGCAAATTG---AT--A-CCGCCCA-T-GTTT-T-ACTG----TAAT----TAT---TT
i Uropsilus_gracilis.UroGra_scaffold_4115               I 53 C 0
s Ursus_maritimus.KK498671.1                              6522824 128 +  28682327 GAAT---AAA-GATGTAGCT-TAT-TAGCA-----C-------------CTTA-TTT-T----GTGAATTGGACCTGCAAAA-T-T-AAACCTTT-C----T----TAGGGATAAACTGA-AG-T-TAGT-TATGT-A-TATGGAGTGTAAATTG---AT--A-GTGTCCA-T-ATTT-T-CCTC----T---------------
i Ursus_maritimus.KK498671.1                            C 0 I 4
s Varecia_rubra.k141_432109                                 10726 138 -     20643 GAAT---AAA-GATATAGCT-TAT-TAACA-----C-------------CTCA-TTT-T----GTGGATGAAACCTGCAAAA-T-T-AAACCTTT-C----TTC--TAGGGACAAAGTGG-AG-T-TAGC-TGTGT-A-TACAGAGTGCGAATAG---AT--A-GTGTTCG-T-ATTT-T-ACTC----TAAA----TAT---TT
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             30261 138 -     33872 GAAT---AAA-GATATAGCT-TAT-TAACA-----C-------------CTCA-TTT-T----GTGGATGAAACCTGCAAAA-T-T-AAACCTTT-C----TTC--TAGGGACAAAGTGG-AG-T-TAGC-TGTGT-A-TACAGAGTGTGAATAG---AT--A-GTGTTCG-T-ATTT-T-ACTC----TAAA----TAT---TT
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1530353 137 -   2331223 GAAT---AAA-GATGTAGC--TAT-TAACA-----C-------------CTTG-TTT-T----GTGGACTGCACCTGCAAAA-T-T-AAACCTTT-C----TTC--TAGGGACAAATTGA-AG-T-TAGC-TGTGT-G-TATGGAGTGTAAATTGTACA------TGTCTA-T-ATTT-T-ACTC----taat----tat---tt
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                146495 129 -    281493 GAAT---AAA-GATGTAGCT-TAT-TAGCA-----G-------------TTTA-TTT-T----GTGAATTGGATCTACAAAA-T-TTAAACCTTT-C----T----TAGGAACAAGATGA-AG-T-TAGT-TGTGT-A-TATGGAGTGTAAATTG-ACA-G----TGTCCA-T-ATTT-T-CCTC----T---------------
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 I 4
s Xerus_inauris.XerIna_scaffold_7898                       132839 125 -    134049 AAAT---AAA-TGTGTAGCT-TAT-TAACA-----C-------------CTCC-TTT-T----GTGGATGAGACTCTCAAAA-T-T-CAACCTTT-C----TTT--TAGAGACAAATTTG-AT-T-TGCT-TGGGT-A-TATAGAGGGTG--------AT--A-GTGTTCA-T-ATTT-T-ACCC----T---------------
i Xerus_inauris.XerIna_scaffold_7898                    C 0 I 4
s Zalophus_californianus.ZalCal_flattened_line_4097        221915 128 -    227762 GAAT---AAA-GATGTAGCT-TAT-TAACC-----C-------------CTTA-TTT-T----GTGAATTGGACCGGCAAAA-T-T-AAACCTTT-C----T----TAAGGAAAAGTTGA-AG-T-TAGT-TGTGT-A-TATGGAGTGTAAATTG-----GTA-GTGTCCG-T-ATTT-T-CTTC----T---------------
i Zalophus_californianus.ZalCal_flattened_line_4097     I 214 I 4
s Zapus_hudsonius.ZapHud_scaffold_202118                     2430  92 -      3360 AAAG---AAA-GAGAGAGCT-TAT-TAGCA-----C-------------CTCT-TGG-T----GTGGCTGAGACCTAAGAAA-T-T-AAGGCTCT-C----ATG--TAGTGACAATCTGG-AG-T-GAGT-TGTGT---------------------------------------------------------------------
i Zapus_hudsonius.ZapHud_scaffold_202118                C 0 I 45
s Ziphius_cavirostris.ZipCav_flattened_line_60625            3921 125 -     13665 GAAT---AAA-GATGTAGCT-TAT-TAACA-----C-------------CTTG-TTT-T----GTGGATTGGACATGCAAAA-T-T-AAAGCTTT-C----TTC--CAGGGACAAATTGA-AG-T-TGGT-TGTGT-A-TATGGGGTGTAAATGA-ACA-G----TGTCCA-T-CTAA-T-------------------------
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 I 1
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590  76 -     47444 I
e Hylobates_pileatus_a.tarseq_592                             37267 2881 -     60944 I
e Tarsius_wallacei.k141_48636                               64696   0 +     65473 C
e Tarsius_lariang.k141_609102                               31387   0 +     42269 C
e Pithecia_vanzolinii.k141_831006                           15424   0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514   0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521   0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292   0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093   0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038   0 +     78826 C
e Pithecia_albicans.k141_991845                             45662   0 -     61926 C
e Cephalopachus_bancanus.k141_702587                        12545   0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530   0 +    345090 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               18975 6 +    209709 AAACAG
s Acinonyx_jubatus.LLWD01000356.1                         2041820 6 +   3721120 AAATAG
i Acinonyx_jubatus.LLWD01000356.1                       I 69 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    119475 6 -    189883 AAACAG
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10665689 6 +  23371972 AAAGAG
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 4 C 0
s Ailurus_fulgens.LNAC01000003.1                          7102638 6 -  16596857 AAAGAG
i Ailurus_fulgens.LNAC01000003.1                        I 4 C 0
s Allactaga_bullata.AllBul_scaffold_141108                   2821 6 -      7259 AAACAG
i Allactaga_bullata.AllBul_scaffold_141108              C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   6871 6 -     60446 AAACAG
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         7585 6 -     29318 AAACAG
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         6523 6 +     38766 AAACAG
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          7481 6 -     80423 AAACAG
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              2426 5 +     19852 -AACAG
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                4642 5 -     12443 -AACAG
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                             1969 5 +      5070 -AACAG
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_macconnelli.k141_2318944                          4451 5 -     24210 -AACAG
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_494922                              955 5 -      8325 -AACAG
i Alouatta_nigerrima.k141_494922                        C 0 C 0
s Alouatta_palliata.k141_405616                              6865 5 +     16794 -AACAG
i Alouatta_palliata.k141_405616                         I 48 C 0
s Alouatta_puruensis.k141_347198                              902 5 +      9111 -AACAG
i Alouatta_puruensis.k141_347198                        C 0 C 0
s Alouatta_seniculus.k141_790278                             6150 5 -      9835 -AACAG
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3528865 5 +   4113121 A-AGAG
i Ammotragus_lervia.NIVO01013474.1                      I 37 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      394816 5 -    631301 AAAGA-
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 I 1
s Antilocapra_americana.AntAmePen_scaffold_27338             6094 6 +     55446 AAAGAG
i Antilocapra_americana.AntAmePen_scaffold_27338        I 37 C 0
s Aotus_azarae.k141_3170768                                 67756 5 +     78111 -AACAG
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                           10697 5 +     22701 -AACAG
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5754666 5 +   9889416 -AACAG
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                            11245 5 -    104377 -AACAG
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                              11274 5 +     23246 -AACAG
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     3885 6 +     11424 AAACAG
i Aplodontia_rufa.AprRuf_scaffold_101456                I 4 C 0
s Arctocebus_calabarensis.k141_587554                        7843 6 +      9265 AAGTAA
i Arctocebus_calabarensis.k141_587554                   I 3 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                13113 5 -     29036 AAAGA-
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 I 1
s Ateles_geoffroyi_b.tarseq_2582                             9544560 5 +  39197703 -AACAG
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             65834 5 +     85812 -AACAG
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                16844 5 +     89302 -AAAAG
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             21348 5 -     58268 -AACAG
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             69342 5 +    119057 -AACAG
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              11311 5 -     25888 -AACAG
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                12391 6 -     16375 AAGCAG
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               6007 6 +      6337 AAGCAG
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26386282 6 +  51448160 aaagag
i Balaenoptera_acutorostrata.KI537095.1                 I 9 C 0
s Balaenoptera_bonaerensis.DF502048.1                       11455 6 -     13118 aaagag
i Balaenoptera_bonaerensis.DF502048.1                   I 9 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   51064 6 -     72089 AAAGAG
i Beatragus_hunteri.BeaHun_scaffold_21644               I 33 C 0
s Bison_bison.KN264915.1                                   305789 6 -   6870073 aaagag
i Bison_bison.KN264915.1                                I 37 C 0
s Bos_indicus.CM003021.1                                 22959895 6 + 161108492 aaagag
i Bos_indicus.CM003021.1                                I 37 C 0
s Bos_mutus.JH883513.1                                     422074 6 +    998990 aaagag
i Bos_mutus.JH883513.1                                  I 37 C 0
s Bos_taurus.CM000177.6                                  22668547 6 + 158972876 aaagag
i Bos_taurus.CM000177.6                                 I 37 C 0
s Bubalus_bubalis.KI419065.1                               677411 6 +   1914593 aaagag
i Bubalus_bubalis.KI419065.1                            I 37 C 0
s Cacajao_ayresi.k141_724503                               119175 5 -    171031 -AACAG
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 18195 5 +    125063 -AACAG
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                20242 5 -    216513 -AACAG
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       12785 5 -    134917 -AACAG
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3225382 6 -   8989139 aaagag
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           403082 6 -  15254737 aaagag
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2978820 6 +   6889770 aaagag
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11528543 6 +  39901454 AAAGAG
i CanFam4.chr31                                         I 4 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   23517 6 +     87036 AAAGAG
i Canis_lupus_VD.CanFam_VD_scaffold_16982               I 4 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11275440 6 -  35597290 AAAGAG
i Canis_lupus_dingo.QKWQ01001993.1                      I 4 C 0
s Canis_lupus_familiaris.chr31                           11097938 6 +  39895921 AAAGAG
i Canis_lupus_familiaris.chr31                          I 4 C 0
s Canis_lupus_orion.HG994411.1                           16464722 6 -  44759192 AAAGAG
i Canis_lupus_orion.HG994411.1                          I 4 C 0
s Capra_aegagrus.CM003214.1                              21336298 6 + 157394656 aaagag
i Capra_aegagrus.CM003214.1                             I 37 C 0
s Capra_hircus.CM004562.1                               135714651 6 - 157403528 AAAGAG
i Capra_hircus.CM004562.1                               I 37 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               64097 5 +     67245 AAAGA-
i Carollia_perspicillata.CarPer_scaffold_4436           I 4 I 1
s Castor_canadensis.CasCan_scaffold_1326                     1391 6 -    202837 AAACAG
i Castor_canadensis.CasCan_scaffold_1326                I 4 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   165109 6 -    276539 AAAGGG
i Catagonus_wagneri.CatWag_scaffold_1305                I 5 C 0
s Cavia_aperea.AVPZ01000278.1                            15791633 6 -  24422027 AAGCAG
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15803578 6 -  24440124 AAGCAG
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       181750 6 +    436027 AAGCAG
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18896909 5 -  29618158 -AACAG
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                13559 5 -     26817 -AACAG
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                17802 5 +     25043 -AACAG
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4370367 6 +   7569818 aaagaa
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_171732          524 6 +      8380 AAAGAA
i Ceratotherium_simum_cottoni.CerCot_scaffold_171732    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6560811 6 +   6739814 AAACAG
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      32288 6 +     60454 AAACAG
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          7492 6 -     21101 AAACAG
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         64802 6 -    107033 AAACAG
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        7662 6 -     17608 AAACAG
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          4830 6 +     45019 AAACAG
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           5106 6 +     15177 AAACAG
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          7712 6 +     16677 AAACAG
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           29908 6 +     35983 AAACAG
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11996433 6 +  12117833 AAACAG
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46483415 6 +  46592721 AAACAG
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                       1526 6 -     27215 AAACAG
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       7726 6 +     35577 AAACAG
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        7520 6 -     25661 AAACAG
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        7692 6 -     17744 AAACAG
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        27061 6 +     37128 AAACAG
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           6071 6 -      6963 AAACAA
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           64607 6 -     68416 AAGCAG
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_854352                             909 6 +     27737 AAGCAG
i Cheirogaleus_medius.k141_854352                       C 0 C 0
s Cheracebus_lucifer.k141_619653                            10867 5 -     18223 -AACAG
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              2608 5 +    188999 -AACAG
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           46907 5 +     57117 -AACAG
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          51587 5 +     54541 -AACAG
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15966324 6 +  43084221 aaacag
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         76387 5 +    196370 -AATAG
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          20568 5 +     40510 -AATAG
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15145246 6 -  15256731 AAACAG
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      39710 6 -     53260 AAACAG
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101150269 6 + 101219884 AAACAG
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                20091 6 -     21363 AAACAG
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           765395 6 +    964067 AAACAG
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_304221              3031 6 -      7053 AAACAG
i Chrysochloris_asiatica.ChrAsi_scaffold_304221         C 0 C 0
s Colobus_angolensis.KN985967.1                          10890040 6 +  10971483 AAACAG
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147667968 6 + 156195979 AAACAG
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            19951 6 +     23629 AAACAG
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60624351 6 +  78930452 aaagag
i Condylura_cristata.JH655880.1                         I 37 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         4766 6 -      5782 AAAGAG
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 284380 6 -    399297 ATGCAG
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53036665 6 +  72327488 AAACAG
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              4235 3 -     22648 GAG---
i Crocidura_indochinensis.CroInd_scaffold_27484         I 47 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            59756 6 -     70449 AAAGAG
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 4 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  216512 6 -    956709 AAGCAC
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 38040 6 -     67205 AAGCTA
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                22868 6 +     26546 AAGCAG
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             64012 6 -    236241 AAGCAG
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          187128 6 -   6883506 aaatta
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16850554 6 +  31942871 AAGCAG
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80042866 6 -  96802777 AAAGAG
i Delphinapterus_leucas.KZ290064.1                      I 1 C 0
s Desmodus_rotundus.KZ672188.1                           18703323 5 -  18957592 aaagA-
i Desmodus_rotundus.KZ672188.1                          C 0 I 1
s Dicerorhinus_sumatrensis.PEKH010003161.1                 328766 6 +    993696 aaagaa
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   9400 6 +    151128 AAAGAA
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   161823 4 +    228994 CAAC--
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3661657 6 +   4240102 AAAAAG
i Dipodomys_ordii.KN672545.1                            I 5 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  4031 6 -     11986 AAAAAG
i Dipodomys_stephensi.DipSte_scaffold_84338             I 5 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                42579 6 -     73477 AAGCAG
i Dolichotis_patagonum.DolPat_scaffold_14102            I 18 C 0
s Echinops_telfairi.JH980316.1                           23007016 6 -  44670279 aaataa
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 15484 6 +     24177 atagaa
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1498862 6 +   1727528 aaagag
i Elaphurus_davidianus.JRFZ01086400.1                   I 37 C 0
s Elephantulus_edwardii.JH947210.1                        7836813 6 +  15467074 AAATAG
i Elephantulus_edwardii.JH947210.1                      I 17 C 0
s Ellobius_lutescens.LOEQ01003611.1                        245367 6 -    369425 AAACAG
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01076532.1                           1719 6 +      9159 AAACAG
i Ellobius_talpinus.LOJH01076532.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85879693 6 +  99434291 AAAGAG
i Enhydra_lutris.KZ291749.1                             I 4 C 0
s Eptesicus_fuscus.JH977687.1                             4711083 6 +   6522550 aaagaa
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5858626 6 -   7175178 aaagaa
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13357112 6 +  41866177 aaagaa
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          18602 6 +     92910 aaagaa
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11544105 6 +  16010500 AAAGAG
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48782279 6 -  48907691 AAACAG
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          321125 6 +    330699 AAAGAG
i Eschrichtius_robustus.EscRob_flattened_line_685       I 9 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             67577 6 +     89355 AAAGAG
i Eubalaena_japonica.EubJap_flattened_line_7756         I 9 C 0
s Eulemur_albifrons.k141_715837                             10671 6 +     13586 AAGCAG
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_1015201                              3930 6 -      4292 AAGCAG
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            17067 6 +     36558 AAGCAG
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            13389 6 +     60246 AAGCAG
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                16874 6 +    109717 AAGCAG
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 4857 6 -     19505 AAGCAG
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                21532 6 +     27497 AAGCAG
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           23988 6 +     26808 AAGCAG
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                38720 6 +     46535 AAGCAG
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              21461 6 -     29447 AAGCAG
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129901395 6 - 159252932 AAATAG
i Felis_catus.CM001386.2                                I 4 C 0
s Felis_catus_fca126.CM031420.1                         129288372 6 - 158578461 AAATAG
i Felis_catus_fca126.CM031420.1                         I 4 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 29562 6 +     52776 AAATAG
i Felis_nigripes.FelNig_flattened_line_8080             I 4 C 0
s Fukomys_damarensis.KN123630.1                          13899432 6 -  19261668 AAGCAG
i Fukomys_damarensis.KN123630.1                         I 11 C 0
s Galago_moholi.ctg555                                     216716 6 -    847004 AAGTAA
i Galago_moholi.ctg555                                  I 7 C 0
s Galago_senegalensis.k141_964197                           19078 6 -     43889 AAGTAA
i Galago_senegalensis.k141_964197                       I 7 C 0
s Galagoides_demidoff.k141_1769638                          16219 6 +     27357 AAGTAA
i Galagoides_demidoff.k141_1769638                      I 7 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               160987 6 +    324696 AAACAG
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    188587 6 -    189561 aaagag
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 37 C 0
s Glis_glis.GliGli_scaffold_79770                           17913 6 -     18683 AAACAA
i Glis_glis.GliGli_scaffold_79770                       I 4 C 0
s Gorilla_beringei.k141_111300                              10682 6 -     14630 AAACAG
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119657782 6 - 195582420 AAACAG
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   81217 6 +    118900 AAACAA
i Graphiurus_murinus.GraMur_scaffold_4493               I 4 C 0
s Hapalemur_alaotrensis.k141_1280836                         7463 6 +     10286 AAGCAG
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             5944 6 -     11661 AAGCAG
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                            11268 6 +     56096 AAGCAG
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        34517 6 -     42470 AAGCAG
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        51143 6 -     54384 AAGCAG
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              24874 6 +     53719 AAAGAG
i Helogale_parvula.HelPar_flattened_line_22962          I 69 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                35684 6 -     91191 AAAGAG
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 37 C 0
s Heterocephalus_glaber.JH602058.1                        2563585 6 +  31725842 aagcag
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               65174 6 +     73687 CAACAG
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              152952 6 +    277961 AAAGAA
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      286421 6 -    477199 aaagag
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959               3694 6 +     26078 AAAGAG
i Hipposideros_galeritus.HipGal_scaffold_52959          C 0 C 0
s Hoolock_leuconedys.ctg79                                     10599 6 -   7690867 AAACAG
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 25310 6 -     67322 AAAGAG
i Hyaena_hyaena.HyaHya_flattened_line_20729             I 4 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           23233 6 -    119109 AAGAAG
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_1620906                              108 6 -     33653 AAACAG
i Hylobates_abbotti.k141_1620906                        N 0 C 0
s Hylobates_agilis.k141_1136966                              1179 6 +      9785 AAACAG
i Hylobates_agilis.k141_1136966                         C 0 C 0
s Hylobates_klossii.k141_468230                              4659 6 +      5464 AAACAG
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14630005 6 -  25970782 AAACAG
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            2556 6 +      4161 AAACAG
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                    11509 6 +     22540 AAGGAG
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7131771 6 +  13083262 ATATGG
i Ictidomys_tridecemlineatus.JH393315.1                 I 4 C 0
s Indri_indri.k141_2197838                                   3002 6 +      3484 AAGCAG
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              15093 6 +     17520 AAAGAG
i Inia_geoffrensis.IniGeo_flattened_line_66725          I 1 C 0
s Jaculus_jaculus.JH725517.1                              8580572 6 +  11848649 aaacag
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               29721 6 +     37189 AAAGAG
i Kogia_breviceps.KogBre_flattened_line_35920           I 9 C 0
s Lagothrix_lagothricha.k141_12968                          55432 5 -    147782 -AACAG
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    7634 6 +     26176 AAAGAa
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 I 1149
s Lemur_catta.scaffold_1                                258412821 6 - 285822530 AAGCAG
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        30141 6 +     39228 AAGCAG
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            59505 6 +     63517 AAGCAG
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        37889 6 -     38897 AAGCAG
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      3931 6 -     13103 AAGCAG
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3094143 6 -   3498232 AAAGAG
i Leptonychotes_weddellii.KB714749.1                    I 4 C 0
s Lepus_americanus.LepAme_scaffold_62849                    22420 6 +     22452 AAAGAA
i Lepus_americanus.LepAme_scaffold_62849                C 0 N 0
s Lipotes_vexillifer.KE558548.1                            142021 6 +   3060487 AAAGAg
i Lipotes_vexillifer.KE558548.1                         I 1 C 0
s Lophocebus_aterrimus.ctg55                             19253900 6 +  19376315 AAACAG
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           16659 6 +     84689 AAATAA
i Loris_lydekkerianus.k141_550999                       I 7 C 0
s Loris_tardigradus.ctg97                                 3784392 6 +   6799190 AAATAA
i Loris_tardigradus.ctg97                               I 7 C 0
s Loxodonta_africana.GL010040.1                          20600729 6 -  62548349 AAACAG
i Loxodonta_africana.GL010040.1                         I 8 C 0
s Lycaon_pictus.CM007556.1                               11097394 6 +  39895028 AAAGAG
i Lycaon_pictus.CM007556.1                              I 4 C 0
s Macaca_arctoides.k141_2201161                             25649 6 +     74745 AAACAG
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12712112 6 +  12821369 AAACAG
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                4685 6 -     26467 AAACAG
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           52556 6 +     63263 AAACAG
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 4666 6 -     26361 AAACAG
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_2667654                                 969 6 -      5626 AAACAG
i Macaca_leonina.k141_2667654                           C 0 C 0
s Macaca_maura.k141_251854                                  51085 6 -     79256 AAACAG
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196041183 6 + 196197964 AAACAG
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11451353 6 +  11645122 AAACAG
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                  10039 6 -     46448 AAACAG
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                7701 6 -     13212 AAACAG
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 21382 6 -     55006 AAACAG
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43846804 6 +  43892939 AAACAG
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               22667 6 -     24607 AAACAG
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                              10036 6 -     27140 AAACAG
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                704100 6 +    802869 AAAGAG
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43443069 6 -  43563597 AAACAG
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4455868 6 -   4543643 AAACAG
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            154383 6 +    252755 AAAGAG
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             41981 6 +     58827 AAAGAG
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36879637 6 +  64221397 ACATGG
i Marmota_marmota.CZRN01000005.1                        I 4 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       67899 6 -    234502 AAAGGG
i Megaderma_lyra.MegLyr_scaffold_3562                   I 45 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             8788 6 -     87323 AAAGAG
i Mellivora_capensis.MelCap_flattened_line_15433        I 4 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 3601 6 +    115071 TAACAG
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1053238 6 -  26018355 AAACAG
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    4684 6 -     12939 AAAGAG
i Mesoplodon_bidens.MesBid_scaffold_96348               I 1 C 0
s Microcebus_murinus.CM007691.1                          16515863 6 +  47401472 AAGCAG
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  46910 6 -     48017 AAATAA
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               27044 5 -     32043 AAAGA-
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 I 1
s Microtus_ochrogaster.CM001673.1                        22826203 6 -  98408828 AAACAG
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8215411 6 +  10048721 AAAGAG
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            39870 6 +     45743 AAAGAG
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         7618 6 +     29742 AAACAG
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        19545 6 -    104932 AAAGAG
i Mirounga_angustirostris.MirAng_flattened_line_8852    I 4 C 0
s Mirza_zaza.k141_593947                                     6557 6 -     12809 AAGCAG
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 152459 6 +    154973 AAAGAG
i Monodon_monoceros.MonMon_M_scaffold_5598              I 1 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                165569 5 +    265003 AAAAT-
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 I 1
s Moschus_moschiferus.MosMos_scaffold_78805                  9255 6 -     19904 AAAGAG
i Moschus_moschiferus.MosMos_scaffold_78805             I 72 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  152603 6 -    168139 AAAGAG
i Mungos_mungo.MunMun_flattened_line_8729               I 69 C 0
s Murina_feae.MurFea_scaffold_2254                          26395 6 -    100666 AAAGAA
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70773480 6 +  92629107 AAACAG
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75495544 6 +  98207768 AAACAG
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67562272 6 +  89017189 AAACAG
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74338252 6 +  97876770 AAACAG
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             16473 6 +     98495 AAACAA
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 4 C 0
s Mustela_putorius.JH417978.1                             4430891 6 -  28371801 AAAGAG
i Mustela_putorius.JH417978.1                           I 4 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     97967 6 -    117718 AAGCTA
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               973416 6 +   8389877 aaagaa
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5024492 6 +   6462685 aaagaa
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3470913 6 -   3747815 aaagaa
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        16150 6 +     66751 AAAGAA
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_239326              471 6 +      2245 AAACAG
i Myrmecophaga_tridactyla.MyrTri_scaffold_239326        I 221 I 58
s Nannospalax_galili.KL201303.1                            125952 6 +    362372 aaaaag
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                              11879 6 +     48152 AAACAG
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4492936 6 -  14209539 AAAGAG
i Neomonachus_schauinslandi.NINY01007774.1              I 4 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3957050 6 -   4490290 AAAGAG
i Neophocaena_asiaeorientalis.KZ688543.1                I 1 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  52878 4 +     94413 AGAG--
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_762468                            1677 6 -      2755 AAACAG
i Nomascus_annamensis.k141_762468                       C 0 C 0
s Nomascus_concolor.k141_256540                              8287 6 -      8966 AAACAG
i Nomascus_concolor.k141_256540                         C 0 C 0
s Nomascus_gabriellae.k141_202556                              49 6 -      1580 AAACAG
i Nomascus_gabriellae.k141_202556                       n 352 C 0
s Nomascus_siki_b.tarseq_453                             7540 6 +     12787 aaacag
i Nomascus_siki_b.tarseq_453                        I 134 C 0
s Nomascus_siki_a.k141_421408                                  2142 6 +     16235 AAACAG
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                40269 6 +   3668941 AAAGAG
i Nyctereutes_procyonoides.CAJHUB010000786.1            I 4 C 0
s Nycticebus_bengalensis.LG16                            65573452 6 -  95554990 AAGTAA
i Nycticebus_bengalensis.LG16                           I 6 C 0
s Nycticebus_coucang.k141_6040852                            1088 6 +      1868 AAGTAA
i Nycticebus_coucang.k141_6040852                       I 6 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65681631 6 +  89412551 AAGTAA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     I 6 C 0
s Ochotona_princeps.JH802095.1                            5001477 6 -  23139505 AAGCCA
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3693111 6 +  10294119 AAGCTC
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             687186 6 -   3126709 AAAGAG
i Odobenus_rosmarus.KB229369.1                          I 4 C 0
s Odocoileus_virginianus.KZ101650.1                       1086248 6 +   1425656 aaagag
i Odocoileus_virginianus.KZ101650.1                     I 37 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         44317 6 +     78940 aaagag
i Okapia_johnstoni.LVCL01S0017931.1                     I 37 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  132009 6 +    145789 AAGCAG
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  44951 6 +     62360 AAGCAG
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7230724 6 -   7562323 AAAGAG
i Orcinus_orca.KB316965.1                               I 1 C 0
s Orycteropus_afer.OryAfe_flattened_line_371885              1945 6 +      3658 AAATAG
i Orycteropus_afer.OryAfe_flattened_line_371885         C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141885437 6 + 163896628 AAAGAA
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      317401 6 -    505867 AAAGAG
i Otocyon_megalotis.JAEUCK010005121.1                   I 4 C 0
s Otolemur_crassicaudatus.k141_505435                        6577 6 -     53940 AAGTAA
i Otolemur_crassicaudatus.k141_505435                   I 7 C 0
s Otolemur_garnettii.GL873528.1                          18014542 6 -  38779656 aagtaa
i Otolemur_garnettii.GL873528.1                         I 7 C 0
s Ovis_aries.CM001582.2                                 134085466 6 - 275406953 aaagag
i Ovis_aries.CM001582.2                                 I 37 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      86712 6 +    140051 AAAGAG
i Ovis_canadensis.OviCan_scaffold_6251                  I 37 C 0
s Pan_paniscus.CM003386.1                               127579960 6 - 205426864 AAACAG
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120157121 6 - 196562556 AAACAG
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  42162 6 +    295523 AAATAG
i Panthera_onca.PanOnc_flattened_line_1615              I 4 C 0
s Panthera_pardus.KV860323.1                              3645976 6 +  18214204 AAATAG
i Panthera_pardus.KV860323.1                            I 4 C 0
s Panthera_tigris.KE721879.1                              5035613 6 -   6340057 AAATAG
i Panthera_tigris.KE721879.1                            I 4 C 0
s Pantholops_hodgsonii.KE114631.1                         1074351 6 -   1292953 aaagag
i Pantholops_hodgsonii.KE114631.1                       I 37 C 0
s Papio_anubis.CM001492.2                               188161861 6 - 188283584 AAACAG
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              4951 6 +     25005 AAACAG
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47519233 6 +  47705337 AAACAG
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 73224 6 -    104429 AAACAG
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   11756 6 +     14967 AAACAG
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_899489                                   426 6 -     13896 AAACAG
i Papio_ursinus.k141_899489                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    123628 6 -    135482 AAAGAG
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 I 4 C 0
s Perodicticus_ibeanus.k141_117958                          12232 6 -     23713 AAGTAA
i Perodicticus_ibeanus.k141_117958                      I 3 C 0
s Perodicticus_potto.k141_1136815                           13383 6 +     61070 AAGTAA
i Perodicticus_potto.k141_1136815                       I 3 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       3662 6 +     49596 ACAAAG
i Perognathus_longimembris.PerPac_flattened_line_19359  I 6 C 0
s Peromyscus_maniculatus.KI615458.1                       2840764 6 -   3366660 AAACAG
i Peromyscus_maniculatus.KI615458.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    19518 6 -     36578 AAGAAG
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              5187 6 +      8220 AAAGAG
i Phocoena_phocoena.PhoPho_flattened_line_53071         I 1 C 0
s Piliocolobus_badius.k141_1987485                           5419 6 -      5908 AAACAG
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       6038 6 -     17985 AAACAG
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            5405 6 +      7694 AAACAG
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26743888 6 +  26888534 AAACAG
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306           101646 6 +    112873 AAAGAA
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990          11692 6 +     21690 AAAGAG
i Platanista_gangetica.PlaMin_flattened_line_72990      I 9 C 0
s Plecturocebus_bernhardi.k141_959214                       27519 5 +     44506 -AACAG
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        27732 5 +     67491 -AACAG
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      17971 5 -     98129 -AACAG
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     27572 5 +    147771 -AACAG
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         4207 5 -     43940 -AACAG
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          8290 5 -     55515 -AACAG
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         27644 5 +    152463 -AACAG
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       5448 5 -    119457 -AACAG
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         17366 5 +    134592 -AACAG
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          27954 5 -     75465 -AACAG
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              192592 6 -    373494 AAACAG
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19813241 6 +  19899266 AAACAG
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               9161 6 -     15069 AAACAG
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              9276 6 +     14865 AAACAG
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                6281 6 -      9567 CAACAG
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6854197 6 +  12164890 AAGCAG
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    673773 6 -   2312742 GAGCAG
i Propithecus_coquerelli.NW_012147997.1                 I 6500 C 0
s Propithecus_coronatus.k141_1353159                         9298 6 +     11805 AAGCAG
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           48633 6 +     52369 AAGCAG
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         41020 6 -     44753 AAGCAG
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            22943 6 +     27322 AAGCAG
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       22589 6 -     53241 AAGCAG
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         44852 6 -     48185 AAGTAG
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           40577 6 +     77221 TAACAG
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            8226 5 -     27784 aaaga-
i Pteronotus_parnellii.KE867983.1                       C 0 I 1
s Pteronura_brasiliensis.PteBra_flattened_line_1343        252537 6 -    344369 AAAGAG
i Pteronura_brasiliensis.PteBra_flattened_line_1343     I 4 C 0
s Pteropus_alecto.KB031157.1                             13249195 6 -  17261082 aaagag
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             607145 6 -   3946241 aaagag
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131542307 6 - 161321710 AAATAG
i Puma_concolor.QAVW01000427.1                          I 4 C 0
s Pygathrix_cinerea.k141_374971                             33267 6 +     56732 AAACAG
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6809764 6 +   6970761 AAACAG
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             9153 6 +     18040 AAACAG
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                23096 6 +     68503 AAAGAG
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 37 C 0
s Rattus_norvegicus.chr11                                13920968 6 +  90463843 AAACAG
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1795027 6 +   2252614 aaagag
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                            3532 6 -     17045 AAACAG
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206381019 6 - 206558726 AAACAG
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44859922 6 -  45163003 AAACAG
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                22539 6 +    109198 AAAGAG
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                      3979 6 -      4338 AAAAAG
i Saiga_tatarica.SaiTat_scaffold_371890                 I 37 C 0
s Saimiri_boliviensis.NW_024100938.1                     15677966 5 -  43202129 -AACAG
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        9880 5 +     34089 -AACAG
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              9819 5 -     60842 -AACAG
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              9913 5 +     67014 -AACAG
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              9890 5 +     60816 -AACAG
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 9827 5 -     76454 -AACAG
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17346597 5 -  30362882 -AACAG
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         25918 5 -     62485 -AACAG
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   41819 6 -    114521 AAAGAG
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        6768 6 +     15331 AAACAG
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      12143 6 +     20762 AAACAG
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         122147 6 +    130994 AAACAG
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           40927 6 +     46263 AAACAG
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     34072 6 +     42640 AAACAG
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        17094 6 +     30600 AAACAG
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  107128 6 -    120886 AAACAG
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            26467 6 +    739146 AAAGAT
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17776801 3 -  27805282 aaa---
i Sorex_araneus.JH798170.1                              I 6 C 0
s Spermophilus_dauricus.KZ294190.1                        2245472 6 +   2842873 ATATGG
i Spermophilus_dauricus.KZ294190.1                      I 4 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             241307 6 -    276980 AAAGAG
i Spilogale_gracilis.SpiGra_flattened_line_905          I 4 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            35504 6 +     62062 AAAGAG
i Suricata_suricatta.SurSur_flattened_line_20339        I 69 C 0
s Sus_scrofa.CM000824.4                                 189277496 6 + 218635234 aaagag
i Sus_scrofa.CM000824.4                                 I 5 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                4491 6 +     20549 AAAGAG
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               18748 6 +     45698 AAACAG
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      813100 6 +   1148477 AAAGAA
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  63742 6 +     99546 AAAGAA
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Theropithecus_gelada.CM009951.1                       194013394 6 - 194193292 AAACAG
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                  1924 6 -      3104 AAACAA
i Tolypeutes_matacus.TolMat_scaffold_475685             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  140234 5 -    259118 AAAGA-
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 I 1
s Trachypithecus_auratus.k141_738098                        30415 6 +     38948 AAACAG
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   23975 6 -     32910 AAACAG
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      5876 6 -     12939 AAACAG
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       5304 6 -     14244 AAACAG
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           46697 6 -     54611 AAACAG
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        4498 6 -     11566 AAACAG
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     6682 6 -     15592 AAACAG
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          5334 6 +     14371 AAACAG
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   3620 6 +     12481 AAACAG
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        3601 6 -     24393 AAACAG
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       8745 6 -     28054 AAACAG
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44663529 6 -  44834318 AAACAG
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       5841 6 +     13828 AAACAG
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                  11262 6 +     90398 AAAGAG
i Tragulus_javanicus.TraJav_scaffold_14717              I 33 C 0
s Trichechus_manatus.JH594618.1                          16091806 6 +  31416278 AAACAG
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2802517 5 -   3938065 AAACA-
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                   11341 5 +     13056 AAACA-
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69319454 6 -  96451834 AAAGAG
i Tursiops_truncatus.MRVK01000923.1                     I 1 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                    2166 6 +    136657 AAGAAG
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 C 0
s Ursus_maritimus.KK498671.1                              6522956 6 +  28682327 AAAGAG
i Ursus_maritimus.KK498671.1                            I 4 C 0
s Varecia_rubra.k141_432109                                 10864 6 -     20643 AAGCAG
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             30399 6 -     33872 AAGCAG
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1530490 6 -   2331223 aaagag
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                146628 6 -    281493 AAAAAG
i Vulpes_lagopus.VulLag_flattened_line_2045             I 4 C 0
s Xerus_inauris.XerIna_scaffold_7898                       132968 6 -    134049 AAATAG
i Xerus_inauris.XerIna_scaffold_7898                    I 4 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        222047 6 -    227762 AAAGAG
i Zalophus_californianus.ZalCal_flattened_line_4097     I 4 C 0
s Zapus_hudsonius.ZapHud_scaffold_202118                     2567 6 -      3360 AAACAG
i Zapus_hudsonius.ZapHud_scaffold_202118                I 45 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            4047 6 -     13665 AAAGAG
i Ziphius_cavirostris.ZipCav_flattened_line_60625       I 1 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Hylobates_pileatus_a.tarseq_592                             37267 2881 -     60944 I
e Tarsius_wallacei.k141_48636                               64696 0 +     65473 C
e Tarsius_lariang.k141_609102                               31387 0 +     42269 C
e Pithecia_vanzolinii.k141_831006                           15424 0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514 0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521 0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292 0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093 0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038 0 +     78826 C
e Pithecia_albicans.k141_991845                             45662 0 -     61926 C
e Cephalopachus_bancanus.k141_702587                        12545 0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530 0 +    345090 C
e Symphalangus_syndactylus.tarseq_24                        20205 0 -  13920577 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               18981 33 +    209709 A-A-ACATGT-AATTT-GCA-----C-TT--C-AA-AAACC-T---A-CT---AC
s Acinonyx_jubatus.LLWD01000356.1                         2041826 33 +   3721120 A-A-ATGTGT-AATTT-GCA-----CCT---C-AA-AACCC-T---A-TT---AT
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    119481 32 -    189883 A-G-GTATGT-AATTT-GCA-----C-CT--C-AA--ATCT-T---A-TT---AA
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10665695 33 +  23371972 A-A-ATATGT-AATTT-GCA-----CTT---C-AA-AATCC-T---A-TT---AC
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7102644 33 -  16596857 A-A-ATATGT-AATTT-GCA-----CTT---C-AA-AACCC-T---A-CC---GC
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_141108                   2827 33 -      7259 A-A-AAATGT-AATTT-ACA-----C-TT--C-AA-AATCC-T---A-TT---AA
i Allactaga_bullata.AllBul_scaffold_141108              C 0 C 0
s Allenopithecus_nigroviridis.k141_2469532                   6877 33 -     60446 A-A-ACATGT-AATTT-GCA-----C-TT--C-AA-AAATC-T---A-TT---AC
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         7591 33 -     29318 A-A-ACATGT-AATTT-GCA-----C-TT--C-AA-AAATC-T---A-TT---AC
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         6529 33 +     38766 A-A-ACATGT-AATTT-GCA-----C-TT--C-AA-AAATC-T---A-TT---AC
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          7487 33 -     80423 A-A-ACATGT-AATTT-GCA-----C-TT--C-AA-AAATC-T---A-TT---AC
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              2431 33 +     19852 A-A-ACATGT-AATTT-GCC-----C-TT--C-AA-AAACC-T---A-TT---AT
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                4647 33 -     12443 A-A-ACATGT-AATTT-GCC-----C-TT--C-GA-AAACC-T---A-TT---AT
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                             1974 33 +      5070 A-A-ACATGT-AATTT-GCC-----C-TT--C-AA-AAACC-T---A-TT---AT
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_macconnelli.k141_2318944                          4456 33 -     24210 A-A-ACATGT-AATTT-GCC-----C-TT--C-GA-AAACC-T---A-TT---AT
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_494922                              960 33 -      8325 A-A-ACATGT-AATTT-GCC-----C-TT--C-GA-AAACC-T---A-TT---AT
i Alouatta_nigerrima.k141_494922                        C 0 C 0
s Alouatta_palliata.k141_405616                              6870 19 +     16794 A-A-ACATGT-AATTT-GCC-----C-TT--------------------------
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_347198                              907 33 +      9111 A-A-ACATGT-AATTC-GCC-----C-TT--C-AA-AAACC-T---A-TT---AT
i Alouatta_puruensis.k141_347198                        C 0 C 0
s Alouatta_seniculus.k141_790278                             6155 33 -      9835 A-A-ACATGT-AATTT-GCC-----C-TT--C-AA-AAACC-T---A-TT---AT
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3528870 33 +   4113121 A-A-ATATAC-AATCT-TCA-----TTT---C-AA-AATCC-T---A-TT---CC
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      394822 32 -    631301 T-A-ATAT-A-AATTT-GCA-----C-T-T-C-AA-AATCC-T---G-TA---AC
i Anoura_caudifer.AnoCau_scaffold_422                   I 1 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             6100 33 +     55446 A-A-ATACAC-AATTT-TAA-----TTT---C-AA-AATCC-T---A-TT---CC
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 67761 33 +     78111 A-A-ACATGT-AATTT-GCA-----C-TT--C-AA-AAACC-T---A-TT---AT
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                           10702 33 +     22701 A-A-ACACGT-AATTT-GCA-----C-TT--C-AA-AAACC-T---A-TT---AT
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5754671 33 +   9889416 A-A-ACATGT-AATTT-ACA-----C-TT--C-AA-AAACC-T---A-TT---AT
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                            11250 33 -    104377 A-A-ACATGT-AATTT-GCA-----C-TT--C-AA-AAACC-T---A-TT---AT
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                              11279 33 +     23246 A-A-ACATGT-AATTT-GCA-----C-TT--C-AA-AAACC-T---A-TT---AT
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     3891 33 +     11424 A-A-ATGTGT-AATTT-GCA-----G-TT--C-AT-AATCC-T---A-TT---AC
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        7849 33 +      9265 A-A-ATATGT-AATTT-ACA-----C-TT--C-AA-AATCC-T---A-TT---AC
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                13119 32 -     29036 T-A-ATAT-A-AATTT-GCA-----C-T-T-C-AA-AATCC-T---C-TA---AC
i Artibeus_jamaicensis.ArtJam_scaffold_41619            I 1 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9544565 33 +  39197703 A-A-ACATGT-AATTT-GCC-----C-TT--C-AA-AAACC-T---A-TT---AT
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             65839 33 +     85812 A-A-ACATGT-AATTT-GCC-----C-TT--C-AA-AAACC-T---A-TT---AT
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                16849 33 +     89302 A-A-ACATGT-AATTT-GCC-----C-TT--C-AA-AAACC-T---A-TT---AT
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             21353 33 -     58268 A-A-ACATGT-AATTT-GCC-----C-TT--C-AA-AAACC-T---A-TT---AT
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             69347 33 +    119057 A-A-ACATGT-AATTT-GCC-----C-TT--C-AA-AAACC-T---A-TT---AT
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              11316 33 -     25888 A-A-ACATGT-AATTT-GCC-----C-TT--C-AA-AAACC-T---A-TT---AT
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                12397 33 -     16375 A-A-CAATGT-AATTT-GTA-----C-TT--C-AA-AATCC-T---A-TT---AC
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               6013 33 +      6337 A-A-CAATGT-AATTT-GTA-----C-TT--C-AA-AATCC-T---A-TT---AC
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26386288 33 +  51448160 a-a-atatgt-aattt-tct-----ttt---c-aa-aatcc-c---A-TT---CC
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                       11461 33 -     13118 a-a-atatgt-aattt-tct-----ttt---c-aa-aatcc-c---A-TT---CC
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   51070 33 -     72089 A-A-CTATAC-AATTT-TCA-----TTT---C-AA-AATCC-T---A-TT---CC
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   305795 33 -   6870073 a-a-atacac-aattt-tca-----ttt---c-aa-aatcc-t---A-TT---CC
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22959901 33 + 161108492 a-a-atacac-aattt-tca-----ttt---c-aa-aatcc-t---A-TT---CC
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     422080 33 +    998990 a-a-atacac-aattt-tca-----ttt---c-aa-aatcc-t---A-TT---CC
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22668553 33 + 158972876 a-a-atacac-aattt-tca-----ttt---c-aa-aatcc-t---A-TT---CC
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               677417 33 +   1914593 a-a-atacac-aattt-tca-----ttt---c-aa-aatcc-t---A-TT---CC
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               119180 31 -    171031 A-A-AC--GT-AATTT-ACA-----C-TT--C-AA-AAACC-T---A-TT---AT
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 18200 31 +    125063 A-A-AC--GT-AATTT-ACA-----C-TT--C-AA-AAACC-T---A-TT---AT
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                20247 31 -    216513 A-A-AC--GT-AATTT-ACA-----C-TT--C-AA-AAACC-T---A-TT---AT
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       12790 31 -    134917 A-A-AC--GT-AATTT-ACA-----C-TT--C-AA-AAACC-T---A-TT---AT
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3225388 33 -   8989139 a-a-atgtgT-AATTT-GCA-----CTT---C-AA-AATCC-T---A-CT---AC
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           403088 33 -  15254737 a-a-atgtgT-AATTT-GCA-----CTT---C-AA-AATCC-T---A-CT---AC
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2978826 33 +   6889770 a-a-atgtgT-AATTT-GCA-----CTT---C-AA-AATCC-T---A-CT---AC
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11528549 33 +  39901454 A-A-ATGTGT-AATTT-GCA-----CTT---C-AA-AGCCA-T---A-TT---AC
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   23523 33 +     87036 A-A-ATGTGT-AATTT-GCA-----CTT---C-AA-AGCCA-T---A-TT---AC
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11275446 33 -  35597290 A-A-ATGTGT-AATTT-GCA-----CTT---C-AA-AGCCA-T---A-TT---AC
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11097944 33 +  39895921 A-A-ATGTGT-AATTT-GCA-----CTT---C-AA-AGCCA-T---A-TT---AC
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16464728 33 -  44759192 A-A-ATGTGT-AATTT-GCA-----CTT---C-AA-AGCCA-T---A-TT---AC
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21336304 33 + 157394656 a-a-atatac-aattt-tca-----ttt---c-aa-aatcc-t---A-TT---CC
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135714657 33 - 157403528 A-G-ATatac-aattt-tca-----ttt---c-aa-aatcc-t---A-TT---CC
i Capra_hircus.CM004562.1                               C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               64103 32 +     67245 T-A-ATAT-A-AATTT-GCA-----C-T-T-C-AA-AATCC-T---G-TA---AC
i Carollia_perspicillata.CarPer_scaffold_4436           I 1 C 0
s Castor_canadensis.CasCan_scaffold_1326                     1397 19 -    202837 A-A-ATATGT-AATTT-GCA-----C-TT--------------------------
i Castor_canadensis.CasCan_scaffold_1326                C 0 I 12
s Catagonus_wagneri.CatWag_scaffold_1305                   165115 18 -    276539 A-A-ATATAT-AATTT-GCA-----C-T---------------------------
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 I 8
s Cavia_aperea.AVPZ01000278.1                            15791639 29 -  24422027 A-A-ATGTGAAAATTT-GTA-----G-TT--C-AA-ATTCC-T------------
i Cavia_aperea.AVPZ01000278.1                           C 0 I 4
s Cavia_porcellus.DS562889.1                             15803584 29 -  24440124 A-A-ATGTGAAAATTT-GTA-----G-TT--C-AA-ATTCC-T------------
i Cavia_porcellus.DS562889.1                            C 0 I 4
s Cavia_tschudii.CavTsc_scaffold_488                       181756 29 +    436027 A-A-ATGTGAAAATTT-GTA-----G-TT--C-AA-ATTCC-T------------
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 I 4
s Cebus_albifrons.Contig22                               18896914 33 -  29618158 A-A-ACATGT-AATTT-CCA-----C-TT--C-AA-AACCC-T---A-TT---AT
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                13564 33 -     26817 A-A-ACATGT-AATTT-CCA-----C-TT--C-AA-AACCC-T---A-TT---AT
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                17807 33 +     25043 A-A-ACATGT-AACTT-CCA-----C-TT--C-AA-AACCC-T---A-TT---AT
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4370373 33 +   7569818 a-a-atatgt-aattt-gcA-----CTT---C-AA-GATCC-T---T-TT---AT
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_171732          530 33 +      8380 A-A-ATATGT-AATTT-GCA-----CTT---C-AA-GATCC-T---T-TT---AT
i Ceratotherium_simum_cottoni.CerCot_scaffold_171732    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6560817 33 +   6739814 A-A-ACATGT-AATTT-GCA-----C-TT--C-AA-AAATC-T---G-TT---AC
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      32294 33 +     60454 A-A-ACATGT-AATTT-GCA-----C-TT--C-AA-AAATC-T---G-TT---AC
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          7498 33 -     21101 A-A-ACATGT-AATTT-GCA-----C-TT--C-AA-AAATC-T---G-TT---AC
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         64808 33 -    107033 A-A-ACATGT-AATTT-GCA-----C-TT--C-AA-AAATC-T---G-TT---AC
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        7668 33 -     17608 A-A-ACATGT-AATTT-GCA-----C-TT--C-AA-AAATC-T---A-TT---AC
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          4836 33 +     45019 A-A-ACATGT-AATTT-GCA-----C-TT--C-AA-AAATC-T---A-TT---AC
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           5112 33 +     15177 A-A-ACATGT-AATTT-GCA-----C-TT--C-AA-AAATC-T---A-TT---AC
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          7718 33 +     16677 A-A-ACATGT-AATTT-GCA-----C-TT--C-AA-AAATC-T---A-TT---AC
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           29914 33 +     35983 A-A-ACATGT-AATTT-GCA-----C-TT--C-AA-AAATC-T---A-TT---AC
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11996439 33 +  12117833 A-A-ACATGT-AATTT-GCA-----C-TT--C-AA-AAATC-T---A-TT---AC
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46483421 33 +  46592721 A-A-ACATGT-AATTT-GCA-----C-TT--C-AA-AAATC-T---A-TT---AC
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                       1532 33 -     27215 A-A-ACATGT-AATTT-GCA-----C-TT--C-AA-AAATC-T---A-TT---AC
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       7732 33 +     35577 A-A-ACATGT-AATTT-GCA-----C-TT--C-AA-AAATC-T---A-TT---AC
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        7526 33 -     25661 A-A-ACATGT-AATTT-GCA-----C-TT--C-AA-AAATC-T---A-TT---AC
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        7698 33 -     17744 A-A-ACATGT-AATTT-GCA-----C-TT--C-AA-AAATC-T---A-TT---AC
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        27067 33 +     37128 A-A-ACATGT-AATTT-GCA-----C-TT--C-AA-AAATC-T---A-TT---AC
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           6077 23 -      6963 A-A-ATAT-T-AATTT-GCA-----C-TT--T-AA-TA-----------------
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           64613 33 -     68416 A-A-CTATGT-AATTT-GCA-----C-TT--C-AA-AATCC-T---A-TT---AC
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_854352                             915 33 +     27737 A-A-CTATGT-AATTG-GCA-----C-TT--C-AA-AATCC-T---A-TT---AC
i Cheirogaleus_medius.k141_854352                       C 0 C 0
s Cheracebus_lucifer.k141_619653                            10872 33 -     18223 A-A-ACATGT-AATTT-ACA-----C-TT--C-AA-AAACC-T---A-TT---AT
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              2613 33 +    188999 A-A-ACATGT-AATTT-ACA-----C-TT--C-AA-AAACC-T---A-TT---AT
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           46912 33 +     57117 A-A-ACATGT-AATTT-ACA-----C-TT--C-AA-AAACC-T---A-TT---AT
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          51592 33 +     54541 A-A-ACATGT-AATTT-ACA-----C-TT--C-AA-AAACC-T---A-TT---AT
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15966330 26 +  43084221 a-a-atttattaattt-gca-----g-TT--C-AA-ACT----------------
i Chinchilla_lanigera.JH721867.1                        C 0 I 6
s Chiropotes_israelita.k141_1189915                         76392 33 +    196370 A-A-AAATGT-AATTT-ACA-----C-TT--T-AA-AAACC-T---A-TT---AT
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          20573 33 +     40510 A-A-ACATGT-AATTT-ACA-----C-TT--T-AA-AAACC-T---A-TT---AT
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15145252 33 -  15256731 A-A-ACATGT-AATTT-GCA-----C-TT--C-AA-AAATC-T---A-TT---AC
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      39716 33 -     53260 A-A-ACATGT-AATTT-GCA-----C-TT--C-AA-AAATC-T---A-TT---AC
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101150275 33 + 101219884 A-A-ACATGT-AATTT-GCA-----C-TT--C-AA-AAATC-T---A-TT---AC
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                20097 31 -     21363 A-A-ATGA-T-AATTT-GCA-----C-TT--T-AA-TATCC-C---A-TT----T
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           765401 31 +    964067 A-A-ATGA-T-AATTT-GCA-----C-TT--T-AA-TATcc-c---a-tt----t
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_304221              3037 33 -      7053 A-A-ACATGT-AATTTG-TA-----C-TT--C-AA-AATCT-T---A-CT---GC
i Chrysochloris_asiatica.ChrAsi_scaffold_304221         C 0 C 0
s Colobus_angolensis.KN985967.1                          10890046 33 +  10971483 A-A-CTATGT-AATTT-gca-----c-tt--c-aa-aaata-t---a-tt---ac
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147667974 33 + 156195979 A-A-CTATGT-AATTT-GCA-----C-TT--C-AA-AAATA-T---A-TT---AC
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            19957 33 +     23629 A-A-ATATGT-AATTT-GCA-----C-TT--C-AA-AAATA-T---A-TT---AC
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60624357 28 +  78930452 a-a-atatgt-aTGTT-ACA-----C-T---T-CA-AAATA-C---A--------
i Condylura_cristata.JH655880.1                         C 0 I 1
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         4772 33 -      5782 A-A-ATATGT-AATTT-GCA-----C-T-T-C-AA-AATTC-T---A-TG---AC
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 284386 32 -    399297 A-G-GTATGT-AATTT-GCA-----C-CT--C-AA--ATCT-T---A-TT---AA
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53036671 32 +  72327488 A-G-ATATGT-AATTT-GCA-----C-CT--C-AA--ATCT-T---A-TT---AA
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              4238 32 -     22648 A-A-ATACAC-AATTT-TCA-----T-T---A-AA-AACTA-T---A-TT---TC
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            59762 33 -     70449 A-A-ATGTAT-AATTT-GCA-----CTT---C-AA-AACCC-T---A-TT---AT
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  216518 34 -    956709 A-A-ACATGTTAATTT-GTA-----T-TT--C-AA-GGTCC-T---C-TT---AC
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 I 1
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 38046 29 -     67205 A-A-CTATGTTCACAT-GCA-----C-TT--C-AA-TCTCC-T------------
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 I 5
s Cuniculus_paca.CunPac_flattened_line_16637                22874 29 +     26546 A-A-ATATGTTAATTT-GCA-----T-TT--C-AA-ACTCC-T------------
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 I 5
s Dasyprocta_punctata.DasPun_flattened_line_634             64018 29 -    236241 A-A-ATATGTTAATTT-GCA-----T-TT--C-AA-ACTCT-T------------
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 I 5
s Dasypus_novemcinctus.JH568778.1                          187134 22 -   6883506 --a-aaaa-t-aattt-gca-----c-tt--c-aa-ta-----------------
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16850560 33 +  31942871 A-A-ATATGT-AATTT-GCA-----C-TT--C-AA-AATCC-T---A-TT---AC
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80042872 33 -  96802777 a-a-atatgt-aattt-tct-----ttt---c-aa-aatcc-c---A-TT---CC
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18703329 32 -  18957592 T-A-ATAT-A-AATTT-GCA-----C-T-T-C-AA-AATCC-T---G-TA---AC
i Desmodus_rotundus.KZ672188.1                          I 1 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 328772 33 +    993696 a-a-atatgt-aattt-gcA-----CTT---C-AA-GATCC-T---A-TT---AC
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   9406 33 +    151128 A-A-ATATGT-AATTT-GCA-----CTT---C-AA-GATCC-T---A-TT---AC
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   161827 29 +    228994 A-A-ATATGTTAATTT-GTA-----G-TT--C-AA-ACTCT-T------------
i Dinomys_branickii.DinBra_scaffold_1996                C 0 I 5
s Dipodomys_ordii.KN672545.1                              3661663 33 +   4240102 A-A-GTATGC-CATTT-TCA-----C-TT--C-AA-AATTA-T---C-AT---AC
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  4037 33 -     11986 A-A-GTATGC-CATTT-TCA-----C-TT--C-AA-AATTA-T---C-AT---AC
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                42585 29 -     73477 A-A-ATGTGATAATTT-GCA-----G-TT--C-AA-ATTGC-T------------
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 I 5
s Echinops_telfairi.JH980316.1                           23007022 33 -  44670279 a-a-acatgt-aatttg-ca-----t-tt--c-aa-aatcC-T---A-CT---AC
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 15490 33 +     24177 a-a-atatgt-aatgt-ata-----C-T-T-C-AA-AATCC-T---A-TT---AC
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1498868 33 +   1727528 a-a-atacac-aattt-tca-----ttt---c-aa-aatcc-t---A-TT---CC
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7836819 32 +  15467074 C-A-ATTGGC-AATTT--CA-----C-TT--C-AA-AATAT-T---A-TT---GT
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        245373 32 -    369425 A-G-GTATGT-AATTT-GCA-----C-CT--C-AA--ATCT-T---A-TT---AA
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01076532.1                           1725 32 +      9159 A-G-GTATGT-AATTT-GCA-----C-CT--C-AA--ATCT-T---A-TT---AA
i Ellobius_talpinus.LOJH01076532.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85879699 33 +  99434291 A-A-ATATGT-AATTT-GCA-----CTT---C-AA-AACCC-C---A-CT---AC
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4711089 33 +   6522550 t-a-atatgt-aATTC-ACA-----C-T-T-C-AA-ATTCC-T---G-TT---AC
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5858632 33 -   7175178 a-a-atatgt-gattt-tCA-----CTT---T-AA-GAGCC-T---A-TT---AC
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13357118 33 +  41866177 a-a-atatgt-gattt-tCA-----CTT---T-AA-GAGCC-T---A-TT---AC
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          18608 33 +     92910 a-a-atatgt-gattt-tCA-----CTT---T-AA-GAGCC-T---A-TT---AC
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11544111 33 +  16010500 A-A-ATATGT-AATTT-GCA-----C-T-T-C-AA-AATCC-C---T-TT---GA
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48782285 33 -  48907691 A-A-ACATGT-AATTT-GCA-----C-TT--C-AA-AAATC-T---A-TT---AC
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          321131 33 +    330699 A-A-ATATGT-AATTT-TCT-----TTT---C-AA-AATCC-C---A-TT---CC
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             67583 33 +     89355 A-A-ATATGT-AATTT-TCT-----TTT---C-AA-AATCC-C---A-TT---CC
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                             10677 33 +     13586 A-A-CTATGT-AATTT-GTA-----C-TT--C-AA-AATCC-T---A-TT---AC
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_1015201                              3936 33 -      4292 A-A-CTATGT-AATTT-GTA-----C-TT--C-AA-AATCC-T---A-TT---AC
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            17073 33 +     36558 A-A-CTATGT-AATTT-GTA-----C-TT--C-AA-AATCC-T---A-TT---AC
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            13395 33 +     60246 A-A-CTATGT-AATTT-GTA-----C-TT--C-AA-AATCC-T---A-TT---AC
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                16880 33 +    109717 A-A-CTATGT-AATTT-GTA-----C-TT--C-AA-AATCC-T---A-TT---AC
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 4863 33 -     19505 A-A-CTATGT-AATTT-GTA-----C-TT--C-AA-AATCC-T---A-TT---AC
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                21538 33 +     27497 A-A-CTATGT-AATTT-GTA-----C-TT--C-AA-AATCC-T---A-TT---AC
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           23994 33 +     26808 A-A-CTATGT-AATTT-GTA-----C-TT--C-AA-AATCC-T---A-TT---AC
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                38726 33 +     46535 A-A-CTATGT-AATTT-GTA-----C-TT--C-AA-AATCC-T---A-TT---AC
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              21467 33 -     29447 A-A-CTATGT-AATTT-GTA-----C-TT--C-AA-AATCC-T---A-TT---AC
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129901401 33 - 159252932 A-A-ATGTGT-AATTT-GCA-----CTT---C-AA-AACCC-T---A-TT---AT
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129288378 33 - 158578461 A-A-ATGTGT-AATTT-GCA-----CTT---C-AA-AACCC-T---A-TT---AT
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 29568 33 +     52776 A-A-ATGTGT-AATTT-GCA-----CTT---C-AA-AACCC-T---A-TT---AT
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13899438 29 -  19261668 A-A-ATATGTTCATTT-GCA-----G-TT--C-AA-ACTCC-T------------
i Fukomys_damarensis.KN123630.1                         C 0 I 5
s Galago_moholi.ctg555                                     216722 33 -    847004 A-A-ATATGT-AATTT-GCA-----C-TT--C-AA-AATCC-G---A-TT---AC
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           19084 33 -     43889 A-A-ATATGT-AATTT-GCA-----C-TT--C-AA-AATCC-G---A-TT---AC
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          16225 33 +     27357 A-A-ATATGT-AATTT-GCA-----C-TT--C-AA-AATCC-T---A-TT---AC
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               160993 33 +    324696 A-A-ATATGT-AATTT-GCA-----T-TT--C-AA-AATCT-T---A-TT---AC
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    188593 33 -    189561 a-a-atacac-aattt-tca-----ttt---c-aa-aatcc-t---G-TT---CC
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           17919 33 -     18683 A-A-ATATGT-AATTT-GCA-----C-TT--C-AA-AATCC-T---A-TT---GC
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                              10688 33 -     14630 A-A-ACATGT-AATTT-GCA-----C-TT--C-AA-AAACC-T---A-TT---AC
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119657788 33 - 195582420 A-A-ACATGT-AATTT-GCA-----C-TT--C-AA-AAACC-T---A-TT---AC
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   81223 33 +    118900 A-A-ATATGT-AATTT-GCA-----C-TT--C-AA-AATCC-T---A-TT---GC
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         7469 33 +     10286 A-A-GTATGT-AATTT-GTA-----C-TT--C-AA-AATCC-T---A-TT---AC
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             5950 33 -     11661 A-A-GTATGT-AATTT-GTA-----C-TT--C-AA-AATCC-T---A-TT---AC
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                            11274 33 +     56096 A-A-GTATGT-AATTT-GTA-----C-TT--C-AA-AATCC-T---A-TT---AC
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        34523 33 -     42470 A-A-GTATGT-AATTT-GTA-----C-TT--C-AA-AATCC-T---A-TT---AC
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        51149 33 -     54384 A-A-GTATGT-AATTT-GTA-----C-TT--C-AA-AATCC-T---A-TT---AC
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              24880 33 +     53719 A-A-ATGTGT-AACTT-GCA-----CTT---C-AA-AGCCC-T---A-AT---AT
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                35690 33 -     91191 A-A-ATATAC-AATTT-TCA-----TTT---C-AA-AATCC-T---A-TT---CC
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2563591 29 +  31725842 a-a-atatattaattt-gca-----G-TT--C-AA-ACTAC-T------------
i Heterocephalus_glaber.JH602058.1                      C 0 I 5
s Heterohyrax_brucei.HetBruBak_scaffold_25354               65180 29 +     73687 A-A-ACATGT-AATTT-GTA-----C-TT--C-AA-AATCT-T---A--------
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              152958 33 +    277961 A-A-ATATGT-AATTT-TCT-----TTT---C-AA-AATCC-C---A-TT---CT
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      286427 33 -    477199 a-a-atgtAG-AATTT-GCA-----C-T-T-C-AA-AATCC-T---A-TT---AC
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959               3700 33 +     26078 A-A-ATGTAG-AAGTT-GCA-----C-T-T-C-AA-AATCC-T---A-TT---AC
i Hipposideros_galeritus.HipGal_scaffold_52959          C 0 C 0
s Hoolock_leuconedys.ctg79                                     10605 33 -   7690867 A-A-ACATGC-AATTT-GCA-----C-TT--C-AA-AAACC-T---A-TT---AC
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 25316 33 -     67322 A-A-ATGTGT-AATTT-GCA-----CTT---C-AA-AACCC-T---A-TT---AT
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           23239 29 -    119109 A-A-ATATGAAAATTT-GCA-----T-TG--C-AA-ACTCC-T------------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 I 5
s Hylobates_abbotti.k141_1620906                              114 33 -     33653 A-A-ACATGC-AATTT-GCA-----C-TT--C-AA-AAACC-T---A-TT---AC
i Hylobates_abbotti.k141_1620906                        C 0 C 0
s Hylobates_agilis.k141_1136966                              1185 33 +      9785 A-A-ACATGC-AATTT-GCA-----C-TT--C-AA-AAACC-T---A-TT---AC
i Hylobates_agilis.k141_1136966                         C 0 C 0
s Hylobates_klossii.k141_468230                              4665 33 +      5464 A-A-ACATGC-AATTT-GCA-----C-TT--C-AA-AAACC-T---A-TT---AC
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14630011 33 -  25970782 A-A-ACATGC-AATTT-GCA-----C-TT--C-AA-AAACC-T---A-TT---AC
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            2562 33 +      4161 A-A-ACATGC-AATTT-GCA-----C-TT--C-AA-AAACC-T---A-TT---AC
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                    11515 34 +     22540 A-A-ATATGTTAATTT-TCA-----G-TT--C-AA-ACTTC-T---A-TT---AC
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7131777 33 +  13083262 A-A-ATATGC-AATTT-GCA-----C-TT--C-AA-TATCC-T---A-TT---AC
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   3008 33 +      3484 A-A-CTATGT-AATTT-GCA-----C-TT--C-AA-AATCC-T---A-TT---AC
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              15099 33 +     17520 A-C-ATATGT-AATTT-TCT-----TTT---C-AA-AATCC-C---A-TT---CC
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8580578 33 +  11848649 a-a-aaatgt-aATTT-ACA-----C-TT--C-AA-AATCC-T---A-TT---AA
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               29727 33 +     37189 A-A-ATATGT-AATTT-TCT-----TTT---C-AA-AATCC-C---A-TT---CC
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          55437 33 -    147782 A-A-ACATGT-AAGTT-GCC-----C-TT--C-AA-AAACC-T---A-TT---AT
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    8789 33 +     26176 t-A-ATATTT-AATTC-ACA-----C-T-T-C-AA-ATTCC-T---G-TT---AC
i Lasiurus_borealis.LasBor_scaffold_59542               I 1149 C 0
s Lemur_catta.scaffold_1                                258412827 33 - 285822530 A-A-CTATGT-AATTT-GTA-----C-TT--C-AA-AATCC-T---A-TT---AC
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        30147 33 +     39228 A-A-TTATGT-AATTT-GCA-----T-TT--C-AA-AATCC-T---A-CT---AC
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            59511 33 +     63517 A-A-TTATGT-AATTT-GCA-----T-TT--C-AA-AATCC-T---A-CT---AC
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        37895 33 -     38897 A-A-TTAGGT-AATTT-GCA-----C-TT--C-AA-AATCC-T---A-TT---AC
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      3937 33 -     13103 A-A-TTATGT-AATTT-GCA-----T-TT--C-AA-AATCC-T---A-CT---AC
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3094149 33 -   3498232 A-A-ATATGT-GATTT-TCA-----CTT---C-AA-AACTC-T---A-TT---GC
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_1475380                    173 33 -       358 A-A-ACAGGT-AATTT-GCA-----C-TT--C-AA-AATCC-C---A-TT---AC
i Lepus_americanus.LepAme_scaffold_1475380              N 0 I 10
s Lipotes_vexillifer.KE558548.1                            142027 33 +   3060487 a-a-atatgt-aattt-tct-----ttt---c-aa-aatcc-c---A-TT---CC
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19253906 33 +  19376315 A-A-ACATGT-AATTT-GCA-----C-TT--C-AA-AAATC-T---A-TT---AC
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           16665 33 +     84689 A-A-ATATGT-AATTT-GCG-----C-TT--C-AA-AATCC-T---A-TT---AC
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3784398 33 +   6799190 A-A-ATATGT-AATTT-GCG-----C-TT--C-AA-AATCC-T---A-TT---AC
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20600735 33 -  62548349 A-A-ACATGT-AATTT-GCA-----C-TT--C-AA-AATCC-T---A-CT---AC
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11097400 33 +  39895028 A-A-ATGTGT-AATTT-GCA-----CTT---C-AA-AGCCA-T---A-TT---AC
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             25655 33 +     74745 A-A-ACATGT-AATTT-GCA-----C-TT--C-AA-AAATC-T---A-TT---AC
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12712118 33 +  12821369 A-A-ACATGT-AATTT-GCA-----C-TT--C-AA-AAATC-T---A-TT---AC
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                4691 33 -     26467 A-A-ACATGT-AATTT-GCA-----C-TT--C-AA-AAATC-T---A-TT---AC
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           52562 33 +     63263 A-A-ACATGT-AATTT-GCA-----C-TT--C-AA-AAATC-T---A-TT---AC
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 4672 33 -     26361 A-A-ACATGT-AATTT-GCA-----C-TT--C-AA-AAATC-T---A-TT---AC
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_2667654                                 975 33 -      5626 A-A-ACATGT-AATTT-GCA-----C-TT--C-AA-AAATC-T---A-TT---AC
i Macaca_leonina.k141_2667654                           C 0 C 0
s Macaca_maura.k141_251854                                  51091 33 -     79256 A-A-ACATGT-AATTT-GCA-----C-TT--C-AA-AAATC-T---A-TT---AC
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196041189 33 + 196197964 A-A-ACATGT-AATTT-GCA-----C-TT--C-AA-AAATC-T---A-TT---AC
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11451359 33 +  11645122 A-A-ACATGT-AATTT-GCA-----C-TT--C-AA-AAATC-T---A-TT---AC
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                  10045 33 -     46448 A-A-ACATGT-AATTT-GCA-----C-TT--C-AA-AAATC-T---A-TT---AC
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                7707 33 -     13212 A-A-ACATGT-AATTT-GCA-----C-TT--C-AA-AAATC-T---A-TT---AC
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 21388 33 -     55006 A-A-ACATGT-AATTT-GCA-----C-TT--C-AA-AAATC-T---A-TT---AC
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43846810 33 +  43892939 A-A-ACATGT-AATTT-GCA-----C-TT--C-AA-AAATC-T---A-TT---AC
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               22673 33 -     24607 A-A-ACATGT-AATTT-GCA-----C-TT--C-AA-AAATC-T---A-TT---AC
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                              10042 33 -     27140 A-A-ACATGT-AATTT-GCA-----C-TT--C-AA-AAATC-T---A-TT---AC
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                704106 33 +    802869 A-A-ATATGT-CATTT-ATA-----C-T-T-C-AA-AATTC-T---A-TT---AC
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43443075 33 -  43563597 A-A-ACATGT-AATTT-GCA-----C-TT--C-AA-AAATC-T---G-TT---AC
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4455874 33 -   4543643 A-A-ACATGT-AATTT-GCA-----C-TT--C-AA-AAATC-T---G-TT---AC
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            154389 33 +    252755 A-A-CTATGT-AATTT-GCA-----CCT---C-AA-AATCC-T---A-CT---AG
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             41987 33 +     58827 A-A-CTATGT-AATTT-GCA-----CCT---C-AA-AATCC-T---A-CT---AG
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36879643 33 +  64221397 A-A-ATATGC-AATTT-GCA-----C-TT--C-AA-TATTC-T---A-TT---AC
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       67905 33 -    234502 A-A-ATATGT-CATTT-GCA-----C-T-T-C-AA-AATGC-T---A-TT---AC
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             8794 33 -     87323 A-A-ATATGT-AATTT-GCA-----CTT---C-AA-AACCC-T---A-CT---AC
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 3607 32 +    115071 A-G-GTATGT-AATTT-GCA-----C-CT--C-AA--ATCT-T---A-TT---AA
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1053244 32 -  26018355 A-A-GTATGT-AATTT-GCA-----C-CT--C-AA--ATCT-T---A-TT---AA
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    4690 33 -     12939 A-A-ATATGT-AATTT-TCT-----TTT---C-AA-AATCC-C---A-TT---CC
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16515869 33 +  47401472 A-A-TTACAC-AATTT-GCA-----C-TT--C-AA-AATCC-T---A-TT---AC
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  46916 33 -     48017 A-A-ATATAT-AATTTG-CA-----T-TT--C-AA-AACCC-T---A-CT---AC
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               27050 32 -     32043 T-A-ATAT-A-AATTT-GCT-----C-T-T-C-AA-AATCC-T---G-TA---AC
i Micronycteris_hirsuta.MicHir_scaffold_37978           I 1 C 0
s Microtus_ochrogaster.CM001673.1                        22826209 32 -  98408828 A-G-GTATGT-AATTT-GCA-----C-CT--C-AA--ATCT-T---A-TT---AA
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8215417 33 +  10048721 T-A-ATATAT-AATTT-GCA-----C-T-T-C-AA-AACCC-T---G-TT---AC
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            39876 33 +     45743 T-A-ATATAT-AATTT-GCA-----C-T-T-C-AA-AACCC-T---G-TT---AC
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         7624 33 +     29742 A-A-ACATGT-AATTT-GCA-----C-TT--C-AA-AAATC-T---A-TT---AC
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        19551 33 -    104932 A-A-ATATGT-AATTT-TCA-----CTT---C-AA-AACTC-T---A-TT---GC
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     6563 33 -     12809 A-A-CTACGC-AATTT-GCA-----C-TT--C-AA-AATCC-T---A-TT---AC
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 152465 33 +    154973 A-A-ATATGT-AATTT-TCT-----TTT---C-AA-AATCC-C---A-TT---CC
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                165575 32 +    265003 T-A-ATAT-C-AGTTT-GCT-----C-T-T-C-AA-AATCC-T---G-TA---AA
i Mormoops_blainvillei.MorMeg_scaffold_2952             I 1 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  9261 33 -     19904 A-A-ATACAT-AATTT-TCA-----TTT---C-AA-AATCC-T---A-TT---CC
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  152609 33 -    168139 A-A-ATGTGT-AACTT-GCA-----CTT---T-AA-AGCCC-T---A-AT---AT
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          26401 33 -    100666 T-A-ATATGT-AATTC-ACA-----C-T-T-C-AA-ATTCC-T---G-TT---AT
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70773486 35 +  92629107 A-G-GTATGT-AATTT-GCA-----C-ct--c-aa--atct-t---a-tttttta
i Mus_caroli.LT608236.1                                 C 0 I 1
s Mus_musculus.chr16                                     75495550 32 +  98207768 A-G-GTATGT-AATTT-GCA-----C-CT--C-AA--ATCT-T---A-TT---AA
i Mus_musculus.chr16                                    C 0 I 1
s Mus_pahari.LT608305.1                                  67562278 32 +  89017189 A-G-GTATGT-AATTT-GCA-----C-CT--C-AA--ATCT-T---A-TT---AA
i Mus_pahari.LT608305.1                                 C 0 I 1
s Mus_spretus.CM004110.1                                 74338258 32 +  97876770 A-G-GTATGT-AATTT-GCA-----C-CT--C-AA--ATCT-T---A-TT---AA
i Mus_spretus.CM004110.1                                C 0 I 1
s Muscardinus_avellanarius.MusAve_scaffold_9643             16479 33 +     98495 A-G-TTATGT-AATTT-GCA-----C-TT--C-AA-AATCC-T---A-TT---GC
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4430897 33 -  28371801 A-A-ATATGT-AATTT-GCA-----CTT---C-AA-AACCC-C---A-CT---AC
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     97973 29 -    117718 A-G-CTATGCTCATAT-GCA-----A-TT--C-AA-ACTCC-T------------
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 I 5
s Myotis_brandtii.KE161952.1                               973422 33 +   8389877 t-a-atatgt-aATTC-ACA-----C-T-T-C-AA-ATTCC-T---G-TT---AT
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5024498 33 +   6462685 t-a-atatgt-aATTC-ACA-----C-T-T-C-AA-ATTCC-T---C-TT---AT
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3470919 33 -   3747815 t-a-atatgt-aATTC-ACA-----C-T-T-C-AA-ATTCC-T---G-TT---AT
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        16156 33 +     66751 T-A-ATATGT-AATTC-ACA-----C-T-T-C-AA-ATTCC-T---G-TT---AT
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_12795               521 32 -     87886 A-A-ATGT-T-AATTT-GCA-----C-TT--C-AA-TATTC-C---A-TT--A-T
i Myrmecophaga_tridactyla.MyrTri_scaffold_12795         I 6 C 0
s Nannospalax_galili.KL201303.1                            125958 33 +    362372 a-a-atatgc-aatTT-ACA-----C-CT--C-AA-AATCC-T---A-TT---AA
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                              11885 33 +     48152 A-A-ATATGT-AATTT-GCA-----C-TT--C-AA-AAATA-T---A-TT---AC
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4492942 33 -  14209539 A-A-ATATGT-AATTT-TCA-----CTT---C-AA-AACTC-T---A-TT---GC
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3957056 33 -   4490290 a-a-atatgt-aattt-tct-----ttt---c-aa-aatcc-c---A-TT---CC
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  52882 34 +     94413 T-G-ATAT-C-AATTTCACT-----C-T-TTC-AA-AATCC-T---G-TA---AC
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_762468                            1683 33 -      2755 A-A-ACATGT-AATTT-GCA-----C-TT--C-AA-AAACC-T---A-TT---AC
i Nomascus_annamensis.k141_762468                       C 0 I 268
s Nomascus_concolor.k141_256540                              8293 33 -      8966 A-A-ACATGT-AATTT-GCA-----C-TT--C-AA-AAACC-T---A-TT---AC
i Nomascus_concolor.k141_256540                         C 0 C 0
s Nomascus_gabriellae.k141_202556                              55 33 -      1580 A-A-ACATGT-AATTT-GCA-----C-TT--C-AA-AAACC-T---A-TT---AC
i Nomascus_gabriellae.k141_202556                       C 0 C 0
s Nomascus_siki_b.tarseq_453                             7546 33 +     12787 a-a-acatgt-aattt-GCA-----C-TT--C-AA-AAACC-T---A-TT---AC
i Nomascus_siki_b.tarseq_453                        C 0 C 0
s Nomascus_siki_a.k141_421408                                  2148 33 +     16235 A-A-ACATGT-AATTT-GCA-----C-TT--C-AA-AAACC-T---A-TT---AC
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                40275 33 +   3668941 A-A-ATGTGT-AATTT-GCA-----CTT---C-AA-AGCCA-T---A-TT---AC
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65573458 33 -  95554990 A-A-ATATGT-AATTT-GCA-----C-TT--C-AA-AATCC-T---A-TT---AC
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_6040852                            1094 33 +      1868 A-A-ATATGT-AATTT-GCA-----C-TT--C-AA-AATCC-T---A-TT---AC
i Nycticebus_coucang.k141_6040852                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65681637 33 +  89412551 A-A-ATATGT-AATTT-GCA-----C-TT--C-AA-AATCC-T---A-TT---AC
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            5001483 33 -  23139505 A-A-ACATGC-AATTT-GCA-----C-TT--T-AA-AATAC-T---G-TA---AC
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3693117 29 +  10294119 A-A-CTATGTTCATAT-GCA-----G-TT--C-AA-ACTCC-T------------
i Octodon_degus.JH651621.1                              C 0 I 5
s Odobenus_rosmarus.KB229369.1                             687192 33 -   3126709 A-A-GTatat-aattt-tca-----ctt---g-aa-aactC-T---A-CT---AC
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1086254 33 +   1425656 a-a-atacac-aattt-tca-----ttt---c-aa-aatca-t---A-TT---CC
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         44323 33 +     78940 a-a-atacac-aattt-tca-----ttt---c-aa-aatcc-t---A-TT---CC
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  132015 32 +    145789 A-G-GTATGT-AATTT-GCA-----C-CT--C-AA--ATCT-T---A-TT---AA
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  44957 32 +     62360 A-G-GTATGC-AATTT-GCA-----C-CT--C-AA--ATCT-T---A-TT---AA
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7230730 33 -   7562323 a-a-atatgt-aattt-tct-----ttt---c-aa-aatcc-c---A-TT---CC
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_371885              1951 31 +      3658 A-A-ACATAC-AATTT--C------C-TT--C-AA-AATCT-T---G-CT---AC
i Orycteropus_afer.OryAfe_flattened_line_371885         C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141885443 33 + 163896628 A-A-ACAGGT-AATTT-GCA-----C-TT--C-AA-AATCC-C---A-TT---AC
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      317407 33 -    505867 A-A-ATGTGT-AATTT-GCA-----CTT---C-AA-AGCCA-T---A-TT---AC
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        6583 33 -     53940 A-A-ATATGT-AATTT-GCA-----C-TT--C-AA-AATCC-T---A-TT---AC
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18014548 33 -  38779656 a-a-atatgt-aattt-gca-----C-TT--C-AA-AATCC-T---A-TT---AC
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134085472 33 - 275406953 a-a-atatac-aattt-tca-----ttt---c-aa-aatcc-t---A-TT---CC
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      86718 33 +    140051 A-A-ATATAC-AATTT-TCA-----TTT---C-AA-AATCC-T---A-TT---CC
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127579966 33 - 205426864 A-A-ACATGT-AATTT-GCA-----C-TT--C-AA-AAACC-T---A-TT---AC
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120157127 33 - 196562556 A-A-ACATGT-AATTT-GCA-----C-TT--C-AA-AAACC-T---A-TT---AC
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  42168 33 +    295523 A-A-ATGTGT-AATTT-GCA-----CTT---C-AA-AACCC-T---A-TT---AT
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3645982 33 +  18214204 A-A-ATGTGT-AATTT-GCA-----CTT---C-AA-AACCC-T---A-TT---AT
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5035619 33 -   6340057 A-A-ATGTGT-AATTT-GCA-----CTT---C-AA-AACCC-T---A-TT---AT
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1074357 33 -   1292953 a-a-atatac-aattt-tca-----ttt---c-aa-aatcc-t---A-TT---GC
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188161867 33 - 188283584 A-A-ACATGT-AATTT-GCA-----C-TT--C-AA-AAATC-G---A-TT---AC
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              4957 33 +     25005 A-A-ACATAT-AATTT-GCA-----C-TT--C-AA-AAATC-T---A-TT---AC
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47519239 33 +  47705337 A-A-ACATGT-AATTT-GCA-----C-TT--C-AA-AAATC-G---A-TT---AC
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 73230 33 -    104429 A-A-ACATGT-AATTT-GCA-----C-TT--C-AA-AAATC-G---A-TT---AC
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   11762 33 +     14967 A-A-ACATGT-AATTT-GCA-----C-TT--C-AA-AAATC-G---A-TT---AC
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_899489                                   432 33 -     13896 A-A-ACATGT-AATTT-GCA-----C-TT--C-AA-AAATC-G---A-TT---AC
i Papio_ursinus.k141_899489                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    123634 33 -    135482 A-A-ATGTGT-AGTTT-GCA-----CTT---C-AA-AACCT-T---A-AT---AT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          12238 33 -     23713 A-A-ATATGT-AATTT-ACA-----C-TT--C-AA-AATTC-T---A-TT---AC
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           13389 33 +     61070 A-A-ATATGT-AATTT-ACA-----C-TT--C-AA-AATTC-T---A-TT---AC
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       3668 33 +     49596 A-C-ATATAT-CATTT-TCA-----C-TT--C-AA-AATTA-T---A-AT---AC
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615458.1                       2840770 32 -   3366660 A-G-GTATGC-AATTT-GCA-----C-CT--C-AA--ATCT-T---A-TT---AA
i Peromyscus_maniculatus.KI615458.1                     C 0 I 1
s Petromus_typicus.PetTyp_scaffold_33007                    19524 29 -     36578 A-A-ATAGGTCAATTT-GCT-----G-TT--T-AT-ACTCC-C------------
i Petromus_typicus.PetTyp_scaffold_33007                C 0 I 5
s Phocoena_phocoena.PhoPho_flattened_line_53071              5193 33 +      8220 A-A-AAATGT-AATTT-TCT-----TTT---C-AA-AATCC-C---A-TT---CC
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Piliocolobus_badius.k141_1987485                           5425 33 -      5908 A-A-ATATGT-AATTT-GCA-----C-TT--C-AA-AAATA-T---A-TT---AC
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       6044 33 -     17985 A-A-ATATGT-AATTT-GCA-----C-TT--C-AA-AAATA-T---A-TT---AC
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            5411 33 +      7694 A-A-ATATGT-AATTT-GCA-----C-TT--C-AA-AAATA-T---A-TT---AC
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26743894 33 +  26888534 A-A-ATATGT-AATTT-Gca-----c-tt--c-aa-aaata-t---a-tt---ac
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306           101652 33 +    112873 T-A-ATATGT-AATTC-ACA-----C-T-T-G-AA-ATTCC-T---G-TT---AC
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990          11698 33 +     21690 A-A-ATATGT-AATTT-TCT-----TTT---C-AA-AATCC-C---A-TT---CC
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       27524 33 +     44506 A-A-ACATGT-AATTT-ACA-----C-TT--C-AA-AAACC-T---A-TT---AT
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        27737 33 +     67491 A-A-ACATGT-AATTT-ACA-----C-TT--C-AA-AAACC-T---A-TT---AT
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      17976 33 -     98129 A-A-ACATGT-AATTT-ACA-----C-TT--C-AA-AAACC-T---A-TT---AT
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     27577 33 +    147771 A-A-ACATGT-AATTT-ACA-----C-TT--C-AA-AAACC-T---A-TT---AT
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         4212 33 -     43940 A-A-ACATGT-AATTT-ACA-----C-TT--C-AA-AAACC-T---A-TT---AT
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          8295 33 -     55515 A-A-ACATGT-AATTT-ACA-----C-TT--C-AA-AAACC-T---A-TT---AT
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         27649 33 +    152463 A-A-ACATGT-AATTT-ACA-----C-TT--C-AA-AAACC-T---A-TT---AT
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       5453 33 -    119457 A-A-ACATGT-AATTT-ACA-----C-TT--C-AA-AAACC-T---A-TT---AT
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         17371 33 +    134592 A-A-ACATGT-AATTT-ACA-----C-TT--C-AA-AAACC-T---A-TT---AT
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          27959 33 -     75465 A-A-ACATGT-AATTT-ACA-----C-TT--C-AA-AAACC-T---A-TT---AT
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              192598 33 -    373494 A-A-ACATGC-AATTT-ACA-----C-TT--C-AA-AAACC-T---A-TT---AC
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19813247 33 +  19899266 A-A-ACATGC-AATTT-ACA-----C-TT--C-AA-AAACC-T---A-TT---AC
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               9167 33 -     15069 A-A-ATATGT-AATTT-GCA-----C-TT--C-AA-AAATA-C---A-TT---AC
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              9282 33 +     14865 A-A-ATATGT-AATTT-GCA-----C-TT--C-AA-AAATA-C---A-TT---AC
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                6287 29 -      9567 A-A-ACATGT-AATTT-GTA-----C-TT--C-AA-AATCT-T---A--------
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6854203 33 +  12164890 A-A-GTATGT-AATTT-GTA-----C-TT--C-AA-AATCC-T---A-TT---AC
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    673779 33 -   2312742 A-A-CTATGT-AATTT-GTA-----C-TT--C-AA-AATCC-T---A-TT---AC
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         9304 33 +     11805 A-A-CTATGT-AATTT-GTA-----C-TT--C-AA-AATCC-T---A-TT---AC
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           48639 33 +     52369 A-A-CTATGT-AATTT-GTA-----C-TT--C-AA-AATCC-T---A-TT---AC
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         41026 33 -     44753 A-A-CTATGT-AATTT-GTA-----C-TT--C-AA-AATCC-T---A-TT---AC
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            22949 33 +     27322 A-A-CTATGT-AATTT-GTA-----C-TT--C-AA-AATCC-T---A-TT---AC
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       22595 33 -     53241 A-A-TTATGT-AATTT-GTA-----C-TT--C-AA-AATCC-T---A-TT---AC
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         44858 33 -     48185 A-A-CTATGT-AATTT-GTA-----C-TT--C-AA-AATCC-T---A-TT---AC
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           40583 32 +     77221 A-G-GTATGT-AATTT-GCA-----C-CT--C-AA--ATCT-T---A-TT---AA
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            8232 33 -     27784 t-aaaaat-c-aattt-aca-----c-T-T-C-AA-AATCC-T---G-TA---AC
i Pteronotus_parnellii.KE867983.1                       I 1 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        252543 33 -    344369 A-A-ATATGT-AATTT-GCA-----CTT---C-AA-AACCC-A---A-CT---AC
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13249201 33 -  17261082 a-a-atatgt-aattt-ata-----c-t--tC-AA-AATCC-T---A-TT---AC
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             607151 34 -   3946241 a-a-atatgt-aattt-ata-----c-t--tC-AAAAATCC-T---A-TT---AC
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131542313 33 - 161321710 A-A-ATGTGT-AATTT-GCA-----CCT---C-AA-AACCC-T---A-TT---AT
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             33273 33 +     56732 A-A-ATATGT-AATTT-GCA-----C-TT--C-AA-AAATA-T---A-TT---AC
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6809770 33 +   6970761 A-A-ATATGT-AATTT-GCA-----C-TT--C-AA-AAATA-T---A-TT---AC
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             9159 33 +     18040 A-A-ATATGT-AATTT-GCA-----C-TT--C-AA-AAATA-T---A-TT---AC
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                23102 33 +     68503 A-A-ATACAC-AATTT-TCA-----TTT---C-AA-AATCA-T---A-TT---CC
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13920974 32 +  90463843 A-G-GTGTGT-AATTT-GCA-----C-CT--C-AA--ATCT-T---A-TT---AA
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1795033 33 +   2252614 a-a-atgtat-AATTT-GCA-----C-T-T-C-AA-AATCC-T---A-TT---TC
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                            3538 33 -     17045 A-A-ATATGT-AATTT-GCA-----C-TT--C-AA-AAATA-T---A-TT---AC
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206381025 33 - 206558726 A-A-ATATGT-AATTT-Gca-----c-tt--c-aa-aaata-t---a-tt---ac
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44859928 33 -  45163003 A-A-ATATGT-AATTT-GCA-----C-TT--C-AA-AAATA-T---A-TT---AC
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                22545 33 +    109198 A-A-ATATGT-AATTT-ATA-----C-T-T-C-AA-AATCC-T---A-TT---AC
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                      3985 33 -      4338 A-A-ATATAC-AATTT-TCA-----TTT---C-AA-AATGC-T---A-TT---CC
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15677971 32 -  43202129 A-A-ACATGT-AATTT-GCA-----C-TT--C--A-AAACC-T---A-TT---AT
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        9885 32 +     34089 A-A-ACATGT-AATTT-GCA-----C-TT--C--A-AAACC-T---A-TT---AT
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              9824 32 -     60842 A-A-ACATGT-AATTT-GCA-----C-TT--C--A-AAACC-T---A-TT---AT
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              9918 32 +     67014 A-A-ACATGT-AATTT-GCA-----C-TT--C--A-AAACC-T---A-TT---AT
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              9895 32 +     60816 A-A-ACATGT-AATTT-GCA-----C-TT--C--A-AAACC-T---A-TT---AT
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 9832 32 -     76454 A-A-ACATGT-AATTT-GCA-----C-TT--C--A-AAACC-T---A-TT---AT
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17346602 33 -  30362882 A-A-ACATGT-AATTT-CCA-----C-TT--C-AA-AACCC-T---A-TT---AT
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         25923 33 -     62485 A-A-ACATGT-AATTT-CCA-----C-TT--C-AA-AACCC-T---A-TT---AT
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   41825 28 -    114521 A-A-ATATGC-AATTT-GCA-----C-T---T-CA-AAATC-C---A--------
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 I 1
s Semnopithecus_entellus.k141_1572367                        6774 33 +     15331 A-A-ATATGT-AATTT-GCA-----C-TT--C-AA-AAATA-T---A-TT---AC
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      12149 33 +     20762 A-A-ATATGT-AATTT-GCA-----C-TT--C-AA-AAATA-T---A-TT---AC
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         122153 33 +    130994 A-A-ATATGT-AATTT-GCA-----C-TT--C-AA-AAATA-T---A-TT---AC
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           40933 33 +     46263 A-A-ATATGT-AATTT-GCA-----C-TT--C-AA-AAATA-T---A-TT---AC
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     34078 33 +     42640 A-A-ATATGT-AATTT-GCA-----C-TT--C-AA-AAATA-T---A-TT---AC
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        17100 33 +     30600 A-A-ATATGT-AATTT-GCA-----C-TT--C-AA-AAATA-T---A-TT---AC
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  107134 31 -    120886 G-G-GTATGT-AATTT-GCA-----C-CT--C-AA--ATCT-T---A-TG----A
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            26473 32 +    739146 G-A-ATATGT-AATTT-ACA-----C-T---C-AA-AATTA-T---A-TT---AC
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17776804 33 -  27805282 a-a-atatgc-aattt-tca-----c-t---ttaa-atttg-t---A-CT---AC
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2245478 33 +   2842873 A-A-ATATGC-AATTT-GCA-----C-TT--C-AA-TATCC-T---A-TT---AC
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             241313 33 -    276980 A-A-ATATGT-AATTT-GCA-----CTT---C-AG-AACCC-T---A-CT---AC
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            35510 33 +     62062 A-A-ATGTGT-AACTT-CCA-----CTT---C-AA-AGCCC-T---A-AT---AT
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189277502 18 + 218635234 a-a-atatat-aattt-GCA-----C-T---------------------------
i Sus_scrofa.CM000824.4                                 C 0 I 8
s Tadarida_brasiliensis.TadBra_scaffold_61492                4497 33 +     20549 T-A-ATATGT-AATTT-GCA-----C-T-T-C-AA-AATCT-T---G-TT---AC
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               18754 33 +     45698 AGA-ATGT-T-AATTT-GCA-----C-TT--C-AA-TATCC-C---A-TT--A-T
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      813106 32 +   1148477 --A-ATATGT-AATTT-GCA-----CTT---C-AA-GATCC-T---C-TT---AC
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  63748 16 +     99546 A-A-ATATGT-AATTT-GCA-----------------------------------
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 I 14
s Theropithecus_gelada.CM009951.1                       194013400 33 - 194193292 A-A-ACATGT-AATTT-GCA-----C-TT--C-AA-AAATC-T---A-TT---AC
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                  1930 23 -      3104 A-A-ATAT-T-AATTT-GCA-----C-TT--C-AA-TA-----------------
i Tolypeutes_matacus.TolMat_scaffold_475685             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  140240 32 -    259118 T-A-ATAT-A-AATTT-GCA-----C-T-T-C-AA-AATCC-T---G-TA---AC
i Tonatia_saurophila.TonSau_scaffold_3334               I 1 C 0
s Trachypithecus_auratus.k141_738098                        30421 33 +     38948 A-A-ATATGT-AGTTT-GCA-----C-TT--C-AA-AAATA-T---A-TT---AC
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   23981 33 -     32910 A-A-ATATGT-AATTT-GCA-----C-TT--C-AA-AAATA-T---A-TT---AC
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      5882 33 -     12939 A-A-ATATGT-AGTTT-GCA-----C-TT--C-AA-AAATA-T---A-TT---AC
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       5310 33 -     14244 A-A-ATATGT-AGTTT-GCA-----C-TT--C-AA-AAATA-T---A-TT---AC
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           46703 33 -     54611 A-A-ATATGT-AATTT-GCA-----C-TT--C-AA-AAATA-T---A-TT---AG
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        4504 33 -     11566 A-A-ATATGT-AGTTT-GCA-----C-TT--C-AA-AAATA-T---A-TT---AC
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     6688 33 -     15592 A-A-ATATGT-AGTTT-GCA-----C-TT--C-AA-AAATA-T---A-TT---AC
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          5340 33 +     14371 A-A-ATATGT-AGTTT-GCA-----C-TT--C-AA-AAATA-T---A-TT---AC
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   3626 33 +     12481 A-A-ATATGT-AGTTT-GCA-----C-TT--C-AA-AAATA-T---A-TT---AC
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        3607 33 -     24393 A-A-ATATGT-AATTT-GCA-----C-TT--C-AA-AAATA-T---A-TT---AC
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       8751 33 -     28054 A-A-ATATGT-AATTT-GCA-----C-TT--C-AA-AAATA-T---A-TT---AC
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44663535 33 -  44834318 A-A-ATATGT-AATTT-GCA-----C-TT--C-AA-AAATA-T---A-TT---AC
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       5847 33 +     13828 A-A-ATATGT-AATTT-GCA-----C-TT--C-AA-AAATA-T---A-TT---AC
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                  11268 36 +     90398 A-A-ATACAT-AATTT-TCA-----TTT---C-AA-AATCC-TGGGA-TT---CC
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 I 309
s Trichechus_manatus.JH594618.1                          16091812 33 +  31416278 A-A-ACATGC-AATTT-GCA-----C-TT--C-AA-AATCC-T---G-CT---AT
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2802522 32 -   3938065 --A-ATGTGT-AATTT-CCA-----C-TT--C-AA-AATGC-T---A-TT---AC
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                   11346 32 +     13056 --A-ATGTGT-AATTT-CCA-----C-TT--C-AA-AATGC-T---A-TT---AC
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69319460 33 -  96451834 a-a-atatgt-aattt-tct-----ttt---c-aa-aatcc-c---A-TT---CC
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                    2172 33 +    136657 A-A-ATATGT-AATTT-GCA-----T-T---A-CA-AGACC-T---ATTT---GC
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 C 0
s Ursus_maritimus.KK498671.1                              6522962 33 +  28682327 A-A-ATATGT-AATTT-GCA-----CTT---C-AA-AACCC-T---A-TT---AC
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                 10870 33 -     20643 A-A-CTATGT-AATTT-GTA-----C-TT--C-AA-AATCC-T---A-TT---AC
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             30405 33 -     33872 A-A-CTATGT-AATTT-GTA-----C-TT--C-AA-AATCC-T---A-TT---AC
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1530496 33 -   2331223 a-a-atgtgT-AATTT-GCA-----CTT---C-AA-AATCC-T---A-TC---AC
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                146634 33 -    281493 A-A-ATGTGT-AATTT-GCA-----CTT---C-AA-AGCCA-T---A-TT---AC
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       132974 33 -    134049 A-A-ATATGC-AATTT-GCA-----C-TT--C-AA-TATCC-T---A-TT---AC
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        222053 33 -    227762 A-A-GCATGT-AATTT-TCA-----CTT---C-AA-AACTC-T---A-CT---AC
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_202118                     2573 33 -      3360 A-A-AAATGT-AATTT-GCA-----C-TT--C-AA-AATCC-T---A-TT---AA
i Zapus_hudsonius.ZapHud_scaffold_202118                C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            4053 33 -     13665 A-A-ATATGT-AATTT-TCT-----TTT---C-AA-AATCC-C---A-TT---CC
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Hylobates_pileatus_a.tarseq_592                             37267 2881 -     60944 I
e Tarsius_wallacei.k141_48636                               64696  0 +     65473 C
e Tarsius_lariang.k141_609102                               31387  0 +     42269 C
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Cephalopachus_bancanus.k141_702587                        12545  0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530  0 +    345090 C
e Symphalangus_syndactylus.tarseq_24                        20205  0 -  13920577 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               19014 10 +    209709 A--AAT---TAACTG
s Acinonyx_jubatus.LLWD01000356.1                         2041859 10 +   3721120 A--AAT---TAGCTG
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    119513  9 -    189883 ---AAT---CAGCTA
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10665728 10 +  23371972 A--AAT---TAGCTG
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7102677 13 -  16596857 A--AATTATTAGCCA
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_141108                   2860 10 -      7259 A--ACT---TAGCTA
i Allactaga_bullata.AllBul_scaffold_141108              C 0 I 15
s Allenopithecus_nigroviridis.k141_2469532                   6910 10 -     60446 A--AAT---TAGCTG
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         7624 10 -     29318 A--AAT---TAGCTG
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         6562 10 +     38766 A--AAT---TAGCTG
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          7520 10 -     80423 A--AAT---TAGCTG
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              2464  9 +     19852 A--AAT---TAG-TG
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                4680  9 -     12443 A--AAT---TAG-TG
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                             2007  9 +      5070 A--AAT---TAG-TG
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_macconnelli.k141_2318944                          4489  9 -     24210 A--AAT---TAG-TG
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_494922                              993  9 -      8325 A--AAT---TAG-TG
i Alouatta_nigerrima.k141_494922                        C 0 C 0
s Alouatta_palliata.k141_405616                              6889  8 +     16794 ---AAT---TAG-TG
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_347198                              940  9 +      9111 A--AAT---TAG-TG
i Alouatta_puruensis.k141_347198                        C 0 C 0
s Alouatta_seniculus.k141_790278                             6188  9 -      9835 A--AAT---TAG-TG
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3528903 10 +   4113121 A--AAT---TAGCTG
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      394854 10 -    631301 C--AAT---TAGCTA
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             6133 10 +     55446 A--AAT---TAGCTG
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 67794 10 +     78111 A--AAT---TAGCTG
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                           10735 10 +     22701 A--AAT---TAGCTG
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5754704 10 +   9889416 A--AAT---TAGCTG
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                            11283 10 -    104377 A--AAT---TAGCTG
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                              11312 10 +     23246 A--AAT---TAGCTG
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     3924  9 +     11424 A--TAT---A-GGTT
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        7882 10 +      9265 A--AAT---TAGCTG
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                13151 10 -     29036 A--AAT---TAGCTA
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9544598  9 +  39197703 A--AAT---TAG-TG
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             65872  9 +     85812 A--AAT---TAG-TG
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                16882  9 +     89302 A--AAT---TAG-TG
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             21386  9 -     58268 A--AAT---TAG-TG
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             69380  9 +    119057 A--AAT---TAG-TG
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              11349  9 -     25888 A--AAT---TAG-TG
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                12430 10 -     16375 A--AAT---TAGCTG
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               6046 10 +      6337 A--AAT---TAGCTG
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26386321 10 +  51448160 A--AAT---TAGCTG
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                       11494 10 -     13118 A--AAT---TAGCTG
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   51103 10 -     72089 A--AAT---TAGCTG
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   305828 10 -   6870073 A--AAT---TAGCTG
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22959934 10 + 161108492 A--AAT---TAGCTG
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     422113 10 +    998990 A--AAT---TAGCTG
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22668586 10 + 158972876 A--AAT---TAGCTG
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               677450 10 +   1914593 G--AAC---TAGCTG
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               119211 10 -    171031 A--AAT---TAGCTA
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 18231 10 +    125063 A--AAT---TAGCTA
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                20278 10 -    216513 A--AAT---TAGCTA
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       12821 10 -    134917 A--AAT---TAGCTA
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3225421 10 -   8989139 A--AAT---TAGCTG
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           403121 10 -  15254737 A--AAT---TAGCTG
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2978859 10 +   6889770 A--AAT---TAGCTG
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11528582 10 +  39901454 A--AAT---TAGCTA
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   23556 10 +     87036 A--AAT---TAGCTA
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11275479 10 -  35597290 A--AAT---TAGCTA
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11097977 10 +  39895921 A--AAT---TAGCTA
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16464761 10 -  44759192 A--AAT---TAGCTA
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21336337 10 + 157394656 A--AAT---TAGCTG
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135714690 10 - 157403528 A--AAT---TAGCTG
i Capra_hircus.CM004562.1                               C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               64135 10 +     67245 A--AAT---TAGCTA
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_1326                     1428 10 -    202837 A--AAT---TAGCTG
i Castor_canadensis.CasCan_scaffold_1326                I 12 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   165141 10 -    276539 A--AAT---TAGCTG
i Catagonus_wagneri.CatWag_scaffold_1305                I 8 C 0
s Cavia_aperea.AVPZ01000278.1                            15791672 10 -  24422027 A--AAT---GTGCTG
i Cavia_aperea.AVPZ01000278.1                           I 4 C 0
s Cavia_porcellus.DS562889.1                             15803617 10 -  24440124 A--AAT---GTGCTG
i Cavia_porcellus.DS562889.1                            I 4 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       181789 10 +    436027 A--AAT---GTGCTG
i Cavia_tschudii.CavTsc_scaffold_488                    I 4 C 0
s Cebus_albifrons.Contig22                               18896947 10 -  29618158 A--AAT---TAGCTG
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                13597 10 -     26817 A--AAT---TAGCTG
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                17840 10 +     25043 A--AAT---TAGCTG
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4370406 10 +   7569818 A--AAT---TAGCTG
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_171732          563 10 +      8380 A--AAT---TAGCTG
i Ceratotherium_simum_cottoni.CerCot_scaffold_171732    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6560850 10 +   6739814 A--AAT---TAGCTG
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      32327 10 +     60454 A--AAT---TAGCTG
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          7531 10 -     21101 A--AAT---TAGCTG
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         64841 10 -    107033 A--AAT---TAGCTG
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        7701 10 -     17608 A--AAT---TAGCTG
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          4869 10 +     45019 A--AAT---TAGCTG
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           5145 10 +     15177 A--AAT---TAGCTG
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          7751 10 +     16677 A--AAT---TAGCTG
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           29947 10 +     35983 A--AAT---TAGCTG
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11996472 10 +  12117833 A--AAT---TAGCTG
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46483454 10 +  46592721 A--AAT---TAGCTG
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                       1565 10 -     27215 A--AAT---TAGCTG
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       7765 10 +     35577 A--AAT---TAGCTG
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        7559 10 -     25661 A--AAT---TAGCTG
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        7731 10 -     17744 A--AAT---TAGCTG
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        27100 10 +     37128 A--AAT---TAGCTG
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           6100  4 -      6963 -----T---TTT---
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           64646 10 -     68416 A--AAT---TAGCAG
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_854352                             948 10 +     27737 A--AAT---TAGCAG
i Cheirogaleus_medius.k141_854352                       C 0 C 0
s Cheracebus_lucifer.k141_619653                            10905 10 -     18223 A--AAG---TAGCTG
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              2646 10 +    188999 A--AAG---TAGCTG
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           46945 10 +     57117 A--AAT---TAGCTG
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          51625 10 +     54541 A--AAG---TAGCTG
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15966362 10 +  43084221 A--AAT---GTGCTG
i Chinchilla_lanigera.JH721867.1                        I 6 C 0
s Chiropotes_israelita.k141_1189915                         76425 10 +    196370 A--AAT---TAGCTA
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          20606 10 +     40510 A--AAT---TAGCTA
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15145285 10 -  15256731 A--AAT---TAGCTG
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      39749 10 -     53260 A--AAT---TAGCTG
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101150308 10 + 101219884 A--AAT---TAGCTG
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                20128 10 -     21363 A--AAT---TATTTA
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           765432 10 +    964067 a--aat---tattta
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_304221              3070 10 -      7053 T--AAC---TAATTT
i Chrysochloris_asiatica.ChrAsi_scaffold_304221         C 0 C 0
s Colobus_angolensis.KN985967.1                          10890079 10 +  10971483 a--aat---tagCTG
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147668007 10 + 156195979 A--AAT---TAGCTG
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            19990 10 +     23629 A--AAT---TAGCTG
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60624386  6 +  78930452 ---------TAGTTG
i Condylura_cristata.JH655880.1                         I 1 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         4805 10 -      5782 A--AAT---TAGCTG
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 284418 10 -    399297 A--AAT---CAGCTG
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53036703 10 +  72327488 A--AAT---CAGCTG
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              4270 10 -     22648 A--AAT---TAGGTA
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            59795 10 -     70449 A--AAT---TAGCTG
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  216553 10 -    956709 A--AAC---TAGCTG
i Ctenodactylus_gundi.CteGun_scaffold_447               I 1 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 38080 10 -     67205 A--AGT---GTGCTG
i Ctenomys_sociabilis.CteSoc_scaffold_19489             I 5 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                22908 10 +     26546 A--AAG---GTGCTG
i Cuniculus_paca.CunPac_flattened_line_16637            I 5 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             64052 10 -    236241 A--AAT---GTGCTG
i Dasyprocta_punctata.DasPun_flattened_line_634         I 5 C 0
s Dasypus_novemcinctus.JH568778.1                          187156  7 -   6883506 -----t---tattta
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16850593 10 +  31942871 A--AAT---TAGCTG
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80042905 10 -  96802777 A--AAT---TAGCTG
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18703361 10 -  18957592 A--AAT---TAGCTA
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 328805 10 +    993696 A--AAT---TAGCTG
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   9439 10 +    151128 A--AAT---TAGCTG
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   161861 10 +    228994 A--ATT---GTGCTA
i Dinomys_branickii.DinBra_scaffold_1996                I 5 C 0
s Dipodomys_ordii.KN672545.1                              3661696 10 +   4240102 A--AAT---TAGCTG
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  4070 10 -     11986 A--AAT---TAGCTG
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                42619 10 -     73477 A--AAT---ATACTG
i Dolichotis_patagonum.DolPat_scaffold_14102            I 5 C 0
s Echinops_telfairi.JH980316.1                           23007055 10 -  44670279 T--AAT---TAGCAG
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 15523 10 +     24177 A--AAT---TAGCTA
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1498901 10 +   1727528 A--AAT---TAGCTG
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7836851 10 +  15467074 A--AAT---TAAACA
i Elephantulus_edwardii.JH947210.1                      C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        245405 10 -    369425 A--AAT---CAGCTG
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01076532.1                           1757 10 +      9159 A--AAT---CAGCTG
i Ellobius_talpinus.LOJH01076532.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85879732 13 +  99434291 A--AATTATTAGCTA
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4711122 10 +   6522550 A--AAT---TAGCTG
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5858665 10 -   7175178 A--AAT---TAGCTG
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13357151 10 +  41866177 A--AAT---TAGCTG
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          18641 10 +     92910 A--AAT---TAGCTG
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11544144 10 +  16010500 A--AAT---TAGCCA
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48782318 10 -  48907691 A--AAT---TAGCTG
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          321164 10 +    330699 A--AAT---TAGCTG
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             67616 10 +     89355 A--AAT---TAGCTG
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                             10710 10 +     13586 A--AAT---TAGCTA
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_1015201                              3969 10 -      4292 A--AAT---TAGCTA
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            17106 10 +     36558 A--AAT---TAGCTA
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            13428 10 +     60246 A--AAT---TAGCTA
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                16913 10 +    109717 A--AAT---TAGCTA
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 4896 10 -     19505 A--AAT---TAGCTA
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                21571 10 +     27497 A--AAT---TAGCTA
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           24027 10 +     26808 A--AAT---TAGCTA
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                38759 10 +     46535 A--AAT---TAGCTA
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              21500 10 -     29447 A--AAT---TAGCTA
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129901434 10 - 159252932 A--AAT---TAGCTG
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129288411 10 - 158578461 A--AAT---TAGTTG
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 29601 10 +     52776 A--AAT---TAGCTG
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13899472 10 -  19261668 A--AAT---GTGCTA
i Fukomys_damarensis.KN123630.1                         I 5 C 0
s Galago_moholi.ctg555                                     216755 10 -    847004 A--AAT---TAGCTG
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           19117 10 -     43889 A--AAT---TAGCTG
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          16258 10 +     27357 A--AAT---TAGCAG
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               161026 10 +    324696 A--AAT---TAGCTG
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    188626 10 -    189561 A--AAT---TAGCTG
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           17952 10 -     18683 A--AAT---TGGTTG
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                              10721 10 -     14630 A--AAT---TAGCTG
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119657821 10 - 195582420 A--AAT---TAGCTG
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   81256 10 +    118900 A--AAT---TGGCTA
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         7502 10 +     10286 A--AAT---TAGCTA
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             5983 10 -     11661 A--AGT---TAGCTA
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                            11307 10 +     56096 A--AAT---TAGCTA
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        34556 10 -     42470 A--AAT---TAGCTA
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        51182 10 -     54384 A--AAT---TAGCTA
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              24913 10 +     53719 A--AAC---TAGCTG
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                35723 10 -     91191 A--AAT---TAGCTG
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2563625 10 +  31725842 A--AAT---GTGCTG
i Heterocephalus_glaber.JH602058.1                      I 5 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               65209  3 +     73687 ------------CTG
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              152991 10 +    277961 G--AAT---TAGCTG
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      286460 10 -    477199 A--AAT---TAGCTG
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959               3733 10 +     26078 A--AAT---TAGCTG
i Hipposideros_galeritus.HipGal_scaffold_52959          C 0 C 0
s Hoolock_leuconedys.ctg79                                     10638 10 -   7690867 A--AAT---TAGCTG
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 25349  9 -     67322 A--AA----TAGCTG
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           23273 10 -    119109 A--AAT---GTGTTG
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       I 5 C 0
s Hylobates_abbotti.k141_1620906                              147 10 -     33653 A--AAT---TAGCTG
i Hylobates_abbotti.k141_1620906                        C 0 C 0
s Hylobates_agilis.k141_1136966                              1218 10 +      9785 A--AAT---TAGCTG
i Hylobates_agilis.k141_1136966                         C 0 C 0
s Hylobates_klossii.k141_468230                              4698 10 +      5464 A--AAT---TAGCTG
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14630044 10 -  25970782 A--AAT---TAGCTG
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            2595 10 +      4161 A--AAT---TAGCTG
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                    11549 10 +     22540 A--AAT---ATGCTT
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7131810 10 +  13083262 A--AAT---TAGTTG
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   3041 10 +      3484 A--AAT---TAGCTG
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              15132 10 +     17520 A--AAT---TAGCTG
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8580611 10 +  11848649 A--ACT---TAGCTG
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               29760 10 +     37189 A--AAT---TAGCTG
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          55470  9 -    147782 A--AAT---TAG-TG
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    8822 10 +     26176 A--AAT---TAGCCG
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258412860 10 - 285822530 A--AAT---TAGCTA
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        30180 10 +     39228 A--AAT---TAGCTG
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            59544 10 +     63517 A--AAT---TAGCTG
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        37928 10 -     38897 A--AAT---TAGCTG
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      3970 10 -     13103 A--AAT---TAGCTG
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3094182 10 -   3498232 A--AAT---TAGCTG
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_470947                     206 10 -      1692 A--AAT---TAATTG
i Lepus_americanus.LepAme_scaffold_470947               n 10 I 150
s Lipotes_vexillifer.KE558548.1                            142060 10 +   3060487 A--AAT---TAGCTG
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19253939 10 +  19376315 A--AAT---TAGCTG
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           16698 10 +     84689 A--AAT---TAGCTG
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3784431 10 +   6799190 A--AAT---TAGCTG
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20600768 10 -  62548349 A--AAT---TAACTG
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11097433 10 +  39895028 A--AAT---TAGCTA
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             25688 10 +     74745 A--AAT---TAGCTG
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12712151 10 +  12821369 A--AAT---TAGCTG
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                4724 10 -     26467 A--AAT---TAGCTG
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           52595 10 +     63263 A--AAT---TAGCTG
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 4705 10 -     26361 A--AAT---TAGCTG
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_2667654                                1008 10 -      5626 A--AAT---TAGCTG
i Macaca_leonina.k141_2667654                           C 0 C 0
s Macaca_maura.k141_251854                                  51124 10 -     79256 A--AAT---TAGCTG
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196041222 10 + 196197964 A--AAT---TAGCTG
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11451392 10 +  11645122 A--AAT---TAGCTG
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                  10078 10 -     46448 A--AAT---TAGCTG
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                7740 10 -     13212 A--AAT---TAGCTG
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 21421 10 -     55006 A--AAT---TAGCTG
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43846843 10 +  43892939 A--AAT---TAGCTG
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               22706 10 -     24607 A--AAT---TAGCTG
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                              10075 10 -     27140 A--AAT---TAGCTG
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                704139 10 +    802869 A--AAT---TAGTTG
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43443108 10 -  43563597 A--AAT---TAGCTG
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4455907 10 -   4543643 A--AAT---TAGCTG
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            154422 10 +    252755 A--AAT---AAGCTA
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             42020 10 +     58827 A--AAT---AAGCTA
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36879676 10 +  64221397 A--AAT---TAGTTG
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       67938 10 -    234502 C--AAT---TAGCTG
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             8827 13 -     87323 A--AATTATTAGCTC
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 3639 10 +    115071 A--AAT---CAGCTG
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1053276 10 -  26018355 A--AAT---CAGCTG
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    4723 10 -     12939 A--AAT---TAGCTG
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16515902 10 +  47401472 A--AAT---TAGCTG
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  46949 10 -     48017 T--AAT---TAGCAA
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               27082 10 -     32043 A--AAT---TAGCTA
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22826241 10 -  98408828 A--AAT---CAGCTG
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8215450 10 +  10048721 A--AAT---TAGCTG
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            39909 10 +     45743 A--AAT---TAGCTG
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         7657 10 +     29742 A--AAT---TAGCTG
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        19584 10 -    104932 A--AAT---TAGCTG
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     6596 10 -     12809 A--AAT---TAGCTG
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 152498 10 +    154973 A--AAT---TAGCTG
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                165607 10 +    265003 A--AAT---TAGCTA
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  9294 10 -     19904 A--AAT---TAGCTG
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  152642 10 -    168139 A--AAC---TAGCTG
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          26434 10 -    100666 A--CAT---TAGCTA
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70773522 12 +  92629107 aaaaat---catctg
i Mus_caroli.LT608236.1                                 I 1 C 0
s Mus_musculus.chr16                                     75495583 12 +  98207768 AAGAAT---CATCTG
i Mus_musculus.chr16                                    I 1 C 0
s Mus_pahari.LT608305.1                                  67562311 10 +  89017189 A--AAT---CATCTT
i Mus_pahari.LT608305.1                                 I 1 C 0
s Mus_spretus.CM004110.1                                 74338291 12 +  97876770 AAGAAT---CATCTG
i Mus_spretus.CM004110.1                                I 1 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             16512 10 +     98495 A--AGC---CAggca
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 I 194
s Mustela_putorius.JH417978.1                             4430930 13 -  28371801 A--AATTATTAGCTA
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     98007 10 -    117718 A--AGT---GTGTTG
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 5 C 0
s Myotis_brandtii.KE161952.1                               973455 10 +   8389877 A--AAT---TAGCTG
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5024531 10 +   6462685 A--AAT---TAGCTG
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3470952 10 -   3747815 A--AAT---TAGCTG
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        16189 10 +     66751 A--AAT---TAGCTG
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_12795               553 10 -     87886 A--AAT---TATTTA
i Myrmecophaga_tridactyla.MyrTri_scaffold_12795         C 0 C 0
s Nannospalax_galili.KL201303.1                            125991 10 +    362372 A--AAT---CAGCTG
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                              11918 10 +     48152 A--AAT---TAGCTG
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4492975 10 -  14209539 A--AAT---TAGCTG
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3957089 10 -   4490290 A--AAT---TAGCTG
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  52916 10 +     94413 A--AAT---TAGCTG
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_881190                              25 10 -      2113 A--AAT---TAGCTG
i Nomascus_annamensis.k141_881190                       n 268 C 0
s Nomascus_concolor.k141_256540                              8326 10 -      8966 A--AAT---TAGCTG
i Nomascus_concolor.k141_256540                         C 0 C 0
s Nomascus_gabriellae.k141_202556                              88 10 -      1580 A--AAT---TAGCTG
i Nomascus_gabriellae.k141_202556                       C 0 C 0
s Nomascus_siki_b.tarseq_453                             7579 10 +     12787 A--AAT---TAGCTG
i Nomascus_siki_b.tarseq_453                        C 0 C 0
s Nomascus_siki_a.k141_421408                                  2181 10 +     16235 A--AAT---TAGCTG
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                40308 10 +   3668941 A--AAT---TAGCTG
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65573491 10 -  95554990 A--AAT---TGGCTG
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_6040852                            1127 10 +      1868 A--AAT---TGGCTG
i Nycticebus_coucang.k141_6040852                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65681670 10 +  89412551 A--AAT---TGGCTG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            5001516  9 -  23139505 A--AAT---TAG-TG
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3693151 10 +  10294119 A--AAT---GTGTTG
i Octodon_degus.JH651621.1                              I 5 C 0
s Odobenus_rosmarus.KB229369.1                             687225 10 -   3126709 A--AAT---TAGCTG
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1086287 10 +   1425656 A--AAT---TAGCTG
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         44356 10 +     78940 A--AAT---TAGCTG
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  132047 10 +    145789 A--AAT---CAGCTG
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  44989 10 +     62360 A--AAT---CAGCTG
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7230763 10 -   7562323 A--AAT---TAGCTG
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_371885              1982 10 +      3658 A--AAT---TAACTG
i Orycteropus_afer.OryAfe_flattened_line_371885         C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141885476 10 + 163896628 A--AAT---TAATTG
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      317440 10 -    505867 A--AAT---TAGCTG
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        6616 10 -     53940 A--AAT---TAGCTG
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18014581 10 -  38779656 A--AAT---TAGCTG
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134085505 10 - 275406953 A--AAT---TAGCTG
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      86751 10 +    140051 A--AAT---TAGCTG
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127579999 10 - 205426864 A--AAT---TAGCTG
i Pan_paniscus.CM003386.1                               C 0 I 5
s Pan_troglodytes.CM009241.2                            120157160 10 - 196562556 A--AAT---TAGCTG
i Pan_troglodytes.CM009241.2                            C 0 I 5
s Panthera_onca.PanOnc_flattened_line_1615                  42201 10 +    295523 A--AAT---TAGCTG
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3646015 10 +  18214204 A--AAT---TAGCTG
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5035652 10 -   6340057 A--AAT---TAGCTG
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1074390 10 -   1292953 A--AAT---TAGCTG
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188161900 10 - 188283584 A--AAT---TAGCTG
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              4990 10 +     25005 A--AAT---TAGCTG
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47519272 10 +  47705337 A--AAT---TAGCTG
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 73263 10 -    104429 A--AAT---TAGCTG
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   11795 10 +     14967 A--AAT---TAGCTG
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_899489                                   465 10 -     13896 A--AAT---TAGCTG
i Papio_ursinus.k141_899489                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    123667 10 -    135482 A--AAT---TAGCTG
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          12271 10 -     23713 A--AAT---TAACTG
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           13422 10 +     61070 A--AAT---TAGCCG
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       3701 10 +     49596 A--AAT---TAGATG
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615458.1                       2840803 10 -   3366660 A--AAT---CAGCTG
i Peromyscus_maniculatus.KI615458.1                     I 1 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    19558 10 -     36578 A--AAG---GTGCCG
i Petromus_typicus.PetTyp_scaffold_33007                I 5 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              5226 10 +      8220 A--AAT---TAGCTG
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Piliocolobus_badius.k141_1987485                           5458 10 -      5908 A--AAT---TAGCTG
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       6077 10 -     17985 A--AAT---TAGCTG
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            5444 10 +      7694 A--AAT---TAGCTG
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26743927 10 +  26888534 a--aat---tagCTG
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306           101685 10 +    112873 A--AAC---TAGCTG
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990          11731 10 +     21690 A--AAT---TAGCTG
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       27557 10 +     44506 A--AAT---TAGCTG
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        27770 10 +     67491 A--AAT---TAGCTG
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      18009 10 -     98129 A--AAT---TAGCTG
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     27610 10 +    147771 A--AAT---TAGCTG
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         4245 10 -     43940 A--AAT---TAGCTG
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          8328 10 -     55515 A--AAT---TAGCTG
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         27682 10 +    152463 A--AAT---TAGCTG
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       5486 10 -    119457 A--AAT---TAGCTG
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         17404 10 +    134592 A--AAT---TAGCTG
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          27992 10 -     75465 A--AAT---TAGCTG
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              192631 10 -    373494 A--AAT---TAGCTG
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19813280 10 +  19899266 A--AAT---TAGCTG
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               9200 10 -     15069 A--AAT---TAGCTG
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              9315 10 +     14865 A--AAT---TAGCTG
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                6316  3 -      9567 ------------CTG
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6854236 10 +  12164890 A--AAT---TAGCTA
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    673812 10 -   2312742 A--AAT---TAGCTG
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         9337 10 +     11805 A--AAT---TAGCTG
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           48672 10 +     52369 A--AAT---TAGCTG
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         41059 10 -     44753 A--AAT---TAGCTG
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            22982 10 +     27322 A--AAT---TAGCTG
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       22628 10 -     53241 A--AAT---TAGCTG
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         44891 10 -     48185 A--AAT---TAGCTG
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           40615 10 +     77221 A--AAT---CAGCTG
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            8265 10 -     27784 A--AAT---TAGCTA
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        252576 13 -    344369 A--AATTATTAGCTA
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13249234 10 -  17261082 A--AAT---TAGCTG
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             607185 10 -   3946241 A--AAT---TAGCTG
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131542346 10 - 161321710 A--AAT---TAGCTG
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             33306 10 +     56732 A--AAT---TAGCTG
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6809803 10 +   6970761 A--AAT---TAGCTG
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             9192 10 +     18040 A--AAT---TAGCTG
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                23135 10 +     68503 A--AAT---TAGCTG
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13921006 10 +  90463843 A--AAT---CAGGGG
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1795066 10 +   2252614 A--AAT---TAGCTG
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                            3571 10 -     17045 A--AAT---TAGCTG
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206381058 10 - 206558726 a--aat---tagCTG
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44859961 10 -  45163003 A--AAT---TAGCTG
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                22578 10 +    109198 A--AAT---TAGCTG
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                      4018 10 -      4338 A--AAT---TAGCTG
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15678003 10 -  43202129 A--AAT---TAGCTG
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        9917 10 +     34089 A--AAT---TAGCTG
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              9856 10 -     60842 A--AAT---TAGCTG
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              9950 10 +     67014 A--AAT---TAGCTG
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              9927 10 +     60816 A--AAT---TAGCTG
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 9864 10 -     76454 A--AAT---TAGCTG
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17346635 10 -  30362882 A--AAT---TAGCTG
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         25956 10 -     62485 A--AAT---TAGCTG
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   41854  6 -    114521 ---------TAGCTG
i Scalopus_aquaticus.ScaAqu_scaffold_9300               I 1 C 0
s Semnopithecus_entellus.k141_1572367                        6807 10 +     15331 A--AAT---TAGCTA
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      12182 10 +     20762 A--AAT---TAGCTA
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         122186 10 +    130994 A--AAT---TAGCTA
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           40966 10 +     46263 A--AAT---TAGCTA
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     34111 10 +     42640 A--AAT---TAGCTA
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        17133 10 +     30600 A--AAT---TAGCTA
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  107165 10 -    120886 A--AAT---CAGCTG
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            26505 10 +    739146 A--AAT---TAGCTT
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17776837 10 -  27805282 A--AAT---TAGCTA
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2245511 10 +   2842873 A--AAT---TAGTTG
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             241346 13 -    276980 A--AATTATTAGCTA
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            35543 10 +     62062 A--AAC---TAGCTG
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189277528 10 + 218635234 A--AAT---TGGCTG
i Sus_scrofa.CM000824.4                                 I 8 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                4530 10 +     20549 C--AAA---TAGCTG
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               18787 10 +     45698 A--AAT---TATTTA
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      813138 10 +   1148477 A--AAT---TAGCTG
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  63778 10 +     99546 A--GAT---TAGCTG
i Tapirus_terrestris.TapTer_scaffold_14939              I 14 C 0
s Theropithecus_gelada.CM009951.1                       194013433 10 - 194193292 A--AAT---TAGCTG
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                  1953  4 -      3104 -----T---TTT---
i Tolypeutes_matacus.TolMat_scaffold_475685             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  140272 10 -    259118 A--AAT---TAGCTA
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        30454 10 +     38948 A--AAT---TAGCTA
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   24014 10 -     32910 A--AAT---TAGCTA
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      5915 10 -     12939 A--AAT---TAGCTA
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       5343 10 -     14244 A--AAT---TAGCTA
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           46736 10 -     54611 A--AAT---TAGCTA
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        4537 10 -     11566 A--AAT---TAGCTA
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     6721 10 -     15592 A--AAT---TAGCTA
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          5373 10 +     14371 A--AAT---TAGCTA
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   3659 10 +     12481 A--AAT---TAGCTA
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        3640 10 -     24393 A--AAT---TAGCTA
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       8784 10 -     28054 A--AAT---TAGCTA
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44663568 10 -  44834318 A--AAT---TAGCTA
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       5880 10 +     13828 A--AAT---TAGCTA
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                  11613 10 +     90398 a--aat---tGGCTG
i Tragulus_javanicus.TraJav_scaffold_14717              I 309 C 0
s Trichechus_manatus.JH594618.1                          16091845 10 +  31416278 A--AAT---TAACAG
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2802554 10 -   3938065 G--AAT---CAGTTG
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                   11378 10 +     13056 G--AAT---CAGTTG
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69319493 10 -  96451834 A--AAT---TAGCTG
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                    2205 10 +    136657 A--AAT---TAACTG
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 C 0
s Ursus_maritimus.KK498671.1                              6522995 10 +  28682327 A--AAT---TAGCTG
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                 10903 10 -     20643 A--AAT---TAGCTA
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             30438 10 -     33872 A--AAT---TAGCTA
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1530529 10 -   2331223 A--AAT---TAGCTG
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                146667 10 -    281493 A--AAT---TAGCTG
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       133007 10 -    134049 A--AAT---TAGTTG
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        222086 10 -    227762 A--AAT---TAGCTG
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_202118                     2606 10 -      3360 A--AAT---TAGCTG
i Zapus_hudsonius.ZapHud_scaffold_202118                C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            4086 10 -     13665 A--AAT---TAGCTG
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Thryonomys_swinderianus.ThrSwi_scaffold_17512             40590 76 -     47444 I
e Hylobates_pileatus_a.tarseq_592                             37267 2881 -     60944 I
e Tarsius_wallacei.k141_48636                               64696  0 +     65473 C
e Tarsius_lariang.k141_609102                               31387  0 +     42269 C
e Pithecia_vanzolinii.k141_831006                           15424  0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514  0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521  0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292  0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093  0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038  0 +     78826 C
e Pithecia_albicans.k141_991845                             45662  0 -     61926 C
e Cephalopachus_bancanus.k141_702587                        12545  0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530  0 +    345090 C
e Symphalangus_syndactylus.tarseq_24                        20205  0 -  13920577 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               19024 5 +    209709 TGTCA
s Acinonyx_jubatus.LLWD01000356.1                         2041869 5 +   3721120 TGTCC
i Acinonyx_jubatus.LLWD01000356.1                       C 0 I 10
s Acomys_cahirinus.AcoCah_scaffold_1625                    119522 5 -    189883 TGTCA
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 I 10
s Ailuropoda_melanoleuca.LNAT01000321.1                  10665738 5 +  23371972 TGTCC
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 I 10
s Ailurus_fulgens.LNAC01000003.1                          7102690 5 -  16596857 TGTCC
i Ailurus_fulgens.LNAC01000003.1                        C 0 I 10
s Allactaga_bullata.AllBul_scaffold_67806                    6707 5 +     22864 TGTCA
i Allactaga_bullata.AllBul_scaffold_67806               n 15 I 16
s Allenopithecus_nigroviridis.k141_2469532                   6920 5 -     60446 TGTCA
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         7634 5 -     29318 TGTCA
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         6572 5 +     38766 TGTCA
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          7530 5 -     80423 TGTCA
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              2473 5 +     19852 TGTCA
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                4689 5 -     12443 TGTCA
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                             2016 5 +      5070 TGTCA
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_macconnelli.k141_2318944                          4498 5 -     24210 TGTCA
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_494922                             1002 5 -      8325 TGTCA
i Alouatta_nigerrima.k141_494922                        C 0 C 0
s Alouatta_palliata.k141_405616                              6897 5 +     16794 TGTCA
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_347198                              949 5 +      9111 TGTCA
i Alouatta_puruensis.k141_347198                        C 0 C 0
s Alouatta_seniculus.k141_790278                             6197 5 -      9835 TGTCA
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3528913 5 +   4113121 TGTCC
i Ammotragus_lervia.NIVO01013474.1                      C 0 I 10
s Anoura_caudifer.AnoCau_scaffold_422                      394864 5 -    631301 TGTCC
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 I 10
s Antilocapra_americana.AntAmePen_scaffold_27338             6143 5 +     55446 TGTCT
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 I 10
s Aotus_azarae.k141_3170768                                 67804 5 +     78111 TGCCA
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                           10745 5 +     22701 TGCCA
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5754714 5 +   9889416 TGCCA
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                            11293 5 -    104377 TGCCA
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                              11322 5 +     23246 TGCCA
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     3933 5 +     11424 TGTCA
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 I 10
s Arctocebus_calabarensis.k141_587554                        7892 5 +      9265 TGTCA
i Arctocebus_calabarensis.k141_587554                   C 0 I 10
s Artibeus_jamaicensis.ArtJam_scaffold_41619                13161 5 -     29036 TGTCC
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 I 10
s Ateles_geoffroyi_b.tarseq_2582                             9544607 5 +  39197703 TGTCA
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             65881 5 +     85812 TGTCA
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                16891 5 +     89302 TGTCA
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             21395 5 -     58268 TGTCA
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             69389 5 +    119057 TGTCA
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              11358 5 -     25888 TGTCA
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                12440 5 -     16375 TGTCA
i Avahi_laniger.k141_2840928                            C 0 I 10
s Avahi_peyrierasi.k141_798820                               6056 5 +      6337 TGTCA
i Avahi_peyrierasi.k141_798820                          C 0 I 10
s Balaenoptera_acutorostrata.KI537095.1                  26386331 5 +  51448160 TGTCC
i Balaenoptera_acutorostrata.KI537095.1                 C 0 I 10
s Balaenoptera_bonaerensis.DF502048.1                       11504 5 -     13118 TGTCC
i Balaenoptera_bonaerensis.DF502048.1                   C 0 I 10
s Beatragus_hunteri.BeaHun_scaffold_21644                   51113 5 -     72089 TGTCC
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 I 10
s Bison_bison.KN264915.1                                   305838 5 -   6870073 TGTCC
i Bison_bison.KN264915.1                                C 0 I 10
s Bos_indicus.CM003021.1                                 22959944 5 + 161108492 TGTCC
i Bos_indicus.CM003021.1                                C 0 I 10
s Bos_mutus.JH883513.1                                     422123 5 +    998990 TGTCC
i Bos_mutus.JH883513.1                                  C 0 I 10
s Bos_taurus.CM000177.6                                  22668596 5 + 158972876 TGTCC
i Bos_taurus.CM000177.6                                 C 0 I 10
s Bubalus_bubalis.KI419065.1                               677460 5 +   1914593 TGTCC
i Bubalus_bubalis.KI419065.1                            C 0 I 4
s Cacajao_ayresi.k141_724503                               119221 5 -    171031 TGTCA
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 18241 5 +    125063 TGTCA
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                20288 5 -    216513 TGTCA
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       12831 5 -    134917 TGTCA
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3225431 5 -   8989139 TGTCC
i Camelus_bactrianus.KN276303.1                         C 0 I 10
s Camelus_dromedarius.KN271192.1                           403131 5 -  15254737 TGTCC
i Camelus_dromedarius.KN271192.1                        C 0 I 10
s Camelus_ferus.KB016973.1                                2978869 5 +   6889770 TGTCC
i Camelus_ferus.KB016973.1                              C 0 I 10
s CanFam4.chr31                                          11528592 5 +  39901454 TGTCC
i CanFam4.chr31                                         C 0 I 10
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   23566 5 +     87036 TGTCC
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 I 10
s Canis_lupus_dingo.QKWQ01001993.1                       11275489 5 -  35597290 TGTCC
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 I 10
s Canis_lupus_familiaris.chr31                           11097987 5 +  39895921 TGTCC
i Canis_lupus_familiaris.chr31                          C 0 I 10
s Canis_lupus_orion.HG994411.1                           16464771 5 -  44759192 TGTCC
i Canis_lupus_orion.HG994411.1                          C 0 I 10
s Capra_aegagrus.CM003214.1                              21336347 5 + 157394656 TGTCC
i Capra_aegagrus.CM003214.1                             C 0 I 10
s Capra_hircus.CM004562.1                               135714700 5 - 157403528 TGTCC
i Capra_hircus.CM004562.1                               C 0 I 10
s Carollia_perspicillata.CarPer_scaffold_4436               64145 5 +     67245 TATCC
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 I 10
s Castor_canadensis.CasCan_scaffold_1326                     1438 5 -    202837 TGTCA
i Castor_canadensis.CasCan_scaffold_1326                C 0 I 10
s Catagonus_wagneri.CatWag_scaffold_1305                   165151 5 -    276539 TATCC
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 I 10
s Cavia_aperea.AVPZ01000278.1                            15791682 5 -  24422027 TTCTA
i Cavia_aperea.AVPZ01000278.1                           C 0 I 10
s Cavia_porcellus.DS562889.1                             15803627 5 -  24440124 TTCTA
i Cavia_porcellus.DS562889.1                            C 0 I 10
s Cavia_tschudii.CavTsc_scaffold_488                       181799 5 +    436027 TTCTA
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 I 10
s Cebus_albifrons.Contig22                               18896957 5 -  29618158 TGTCA
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                13607 5 -     26817 TGTCA
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                17850 5 +     25043 TGTCA
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4370416 5 +   7569818 TGTCC
i Ceratotherium_simum.JH767818.1                        C 0 I 10
s Ceratotherium_simum_cottoni.CerCot_scaffold_171732          573 5 +      8380 TGTCC
i Ceratotherium_simum_cottoni.CerCot_scaffold_171732    C 0 I 10
s Cercocebus_atys.KQ010443.1                              6560860 4 +   6739814 -GTCA
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      32337 4 +     60454 -GTCA
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          7541 4 -     21101 -GTCA
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         64851 4 -    107033 -GTCA
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        7711 5 -     17608 TGTCA
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          4879 5 +     45019 TGTCA
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           5155 5 +     15177 TGTCA
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          7761 5 +     16677 TGTCA
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           29957 5 +     35983 TGTCA
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11996482 5 +  12117833 TGTCA
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46483464 5 +  46592721 TGTCA
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                       1575 5 -     27215 TGTCA
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       7775 5 +     35577 TGTCA
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        7569 5 -     25661 TGTCA
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        7741 5 -     17744 TGTCA
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        27110 5 +     37128 TGTCA
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           6104 1 -      6963 T----
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 I 9
s Cheirogaleus_major.k141_1157592                           64656 5 -     68416 TGTCA
i Cheirogaleus_major.k141_1157592                       C 0 I 10
s Cheirogaleus_medius.k141_854352                             958 5 +     27737 TGTCA
i Cheirogaleus_medius.k141_854352                       C 0 I 10
s Cheracebus_lucifer.k141_619653                            10915 5 -     18223 TGTCA
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              2656 5 +    188999 TGTCA
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           46955 5 +     57117 TGTCA
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          51635 5 +     54541 TGTCA
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15966372 5 +  43084221 TGCTA
i Chinchilla_lanigera.JH721867.1                        C 0 I 10
s Chiropotes_israelita.k141_1189915                         76435 5 +    196370 TGTCG
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          20616 5 +     40510 TGTCG
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15145295 5 -  15256731 TGTCA
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      39759 5 -     53260 TGTCA
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101150318 5 + 101219884 TGTCA
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                20138 1 -     21363 T----
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 I 9
s Choloepus_hoffmanni.KN194586.1                           765442 1 +    964067 t----
i Choloepus_hoffmanni.KN194586.1                        C 0 I 9
s Chrysochloris_asiatica.ChrAsi_scaffold_304221              3080 5 -      7053 TGCCC
i Chrysochloris_asiatica.ChrAsi_scaffold_304221         C 0 I 10
s Colobus_angolensis.KN985967.1                          10890089 5 +  10971483 TGTCA
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147668017 5 + 156195979 TGTCA
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            20000 5 +     23629 TGTCA
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60624392 5 +  78930452 TGTCC
i Condylura_cristata.JH655880.1                         C 0 I 10
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         4815 5 -      5782 TGTAC
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 I 10
s Cricetomys_gambianus.CriGam_scaffold_949                 284428 5 -    399297 TGTCA
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 I 10
s Cricetulus_griseus.LT883672.1                          53036713 5 +  72327488 TGTCA
i Cricetulus_griseus.LT883672.1                         C 0 I 10
s Crocidura_indochinensis.CroInd_scaffold_27484              4280 5 -     22648 TGTTC
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 I 10
s Cryptoprocta_ferox.CryFer_flattened_line_19014            59805 5 -     70449 TGTCC
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 I 10
s Ctenodactylus_gundi.CteGun_scaffold_447                  216563 5 -    956709 TATCA
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 I 10
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 38090 5 -     67205 TGCTA
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 I 10
s Cuniculus_paca.CunPac_flattened_line_16637                22918 5 +     26546 TGCTA
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 I 10
s Dasyprocta_punctata.DasPun_flattened_line_634             64062 5 -    236241 TGCTA
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 I 10
s Dasypus_novemcinctus.JH568778.1                          187163 1 -   6883506 t----
i Dasypus_novemcinctus.JH568778.1                       C 0 I 9
s Daubentonia_madagascariensis.ctg11                     16850603 5 +  31942871 TGTCA
i Daubentonia_madagascariensis.ctg11                    C 0 I 10
s Delphinapterus_leucas.KZ290064.1                       80042915 5 -  96802777 TGTCC
i Delphinapterus_leucas.KZ290064.1                      C 0 I 10
s Desmodus_rotundus.KZ672188.1                           18703371 5 -  18957592 TGTCC
i Desmodus_rotundus.KZ672188.1                          C 0 I 10
s Dicerorhinus_sumatrensis.PEKH010003161.1                 328815 5 +    993696 TGTCC
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 I 10
s Diceros_bicornis.DicBicMic_scaffold_9545                   9449 5 +    151128 TGTCC
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 I 10
s Dinomys_branickii.DinBra_scaffold_1996                   161871 5 +    228994 TGCTA
i Dinomys_branickii.DinBra_scaffold_1996                C 0 I 123
s Dipodomys_ordii.KN672545.1                              3661706 5 +   4240102 TGTGA
i Dipodomys_ordii.KN672545.1                            C 0 I 10
s Dipodomys_stephensi.DipSte_scaffold_84338                  4080 5 -     11986 TGTGA
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 I 10
s Dolichotis_patagonum.DolPat_scaffold_14102                42629 5 -     73477 TGCTA
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 I 10
s Echinops_telfairi.JH980316.1                           23007065 5 -  44670279 TATCC
i Echinops_telfairi.JH980316.1                          C 0 I 10
s Eidolon_helvum.KE772537.1                                 15533 5 +     24177 TGTCC
i Eidolon_helvum.KE772537.1                             C 0 I 10
s Elaphurus_davidianus.JRFZ01086400.1                     1498911 5 +   1727528 TGTCC
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 I 10
s Elephantulus_edwardii.JH947210.1                        7836861 5 +  15467074 TATTC
i Elephantulus_edwardii.JH947210.1                      C 0 I 10
s Ellobius_lutescens.LOEQ01003611.1                        245415 5 -    369425 TGTCA
i Ellobius_lutescens.LOEQ01003611.1                     C 0 I 10
s Ellobius_talpinus.LOJH01076532.1                           1767 5 +      9159 TGTCA
i Ellobius_talpinus.LOJH01076532.1                      C 0 I 10
s Enhydra_lutris.KZ291749.1                              85879745 5 +  99434291 TGTCC
i Enhydra_lutris.KZ291749.1                             C 0 I 10
s Eptesicus_fuscus.JH977687.1                             4711132 5 +   6522550 TATAC
i Eptesicus_fuscus.JH977687.1                           C 0 I 10
s Equus_asinus.JREZ01000062.1                             5858675 5 -   7175178 CATCC
i Equus_asinus.JREZ01000062.1                           C 0 I 10
s Equus_caballus.CM000402.2                              13357161 5 +  41866177 CATCC
i Equus_caballus.CM000402.2                             C 0 I 10
s Equus_przewalskii.ATBW01073585.1                          18651 5 +     92910 CATCC
i Equus_przewalskii.ATBW01073585.1                      C 0 I 10
s Erinaceus_europaeus.JH835290.1                         11544154 5 +  16010500 TGTCC
i Erinaceus_europaeus.JH835290.1                        C 0 I 10
s Erythrocebus_patas.Contig8                             48782328 5 -  48907691 TGTCA
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          321174 5 +    330699 TGTCC
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 I 10
s Eubalaena_japonica.EubJap_flattened_line_7756             67626 5 +     89355 TGTCC
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 I 10
s Eulemur_albifrons.k141_715837                             10720 5 +     13586 TGTCA
i Eulemur_albifrons.k141_715837                         C 0 I 10
s Eulemur_collaris.k141_1015201                              3979 5 -      4292 TGTCA
i Eulemur_collaris.k141_1015201                         C 0 I 10
s Eulemur_coronatus.k141_3240342                            17116 5 +     36558 TGTCA
i Eulemur_coronatus.k141_3240342                        C 0 I 10
s Eulemur_flavifrons.k141_903901                            13438 5 +     60246 TGTCA
i Eulemur_flavifrons.k141_903901                        C 0 I 10
s Eulemur_fulvus.k141_653297                                16923 5 +    109717 TGTCA
i Eulemur_fulvus.k141_653297                            C 0 I 10
s Eulemur_macaco.k141_747087                                 4906 5 -     19505 TGTCA
i Eulemur_macaco.k141_747087                            C 0 I 10
s Eulemur_mongoz.k141_825972                                21581 5 +     27497 TGTCA
i Eulemur_mongoz.k141_825972                            C 0 I 10
s Eulemur_rubriventer.k141_411740                           24037 5 +     26808 TGTCA
i Eulemur_rubriventer.k141_411740                       C 0 I 10
s Eulemur_rufus.k141_1620292                                38769 5 +     46535 TGTCA
i Eulemur_rufus.k141_1620292                            C 0 I 10
s Eulemur_sanfordi.k141_186399                              21510 5 -     29447 TGTCA
i Eulemur_sanfordi.k141_186399                          C 0 I 10
s Felis_catus.CM001386.2                                129901444 5 - 159252932 TGTAC
i Felis_catus.CM001386.2                                C 0 I 10
s Felis_catus_fca126.CM031420.1                         129288421 5 - 158578461 TGTAC
i Felis_catus_fca126.CM031420.1                         C 0 I 10
s Felis_nigripes.FelNig_flattened_line_8080                 29611 5 +     52776 TGTAC
i Felis_nigripes.FelNig_flattened_line_8080             C 0 I 10
s Fukomys_damarensis.KN123630.1                          13899482 5 -  19261668 TGCTA
i Fukomys_damarensis.KN123630.1                         C 0 I 10
s Galago_moholi.ctg555                                     216765 5 -    847004 TGTCA
i Galago_moholi.ctg555                                  C 0 I 10
s Galago_senegalensis.k141_964197                           19127 5 -     43889 TGTCA
i Galago_senegalensis.k141_964197                       C 0 I 10
s Galagoides_demidoff.k141_1769638                          16268 5 +     27357 TGTCA
i Galagoides_demidoff.k141_1769638                      C 0 I 10
s Galeopterus_variegatus.GalVar_scaffold_354               161036 5 +    324696 TGTCA
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 I 10
s Giraffa_tippelskirchi.LVKQ01S012154.1                    188636 5 -    189561 TGTCC
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 I 10
s Glis_glis.GliGli_scaffold_79770                           17962 5 -     18683 TGCCA
i Glis_glis.GliGli_scaffold_79770                       C 0 I 10
s Gorilla_beringei.k141_111300                              10731 5 -     14630 TGTCA
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119657831 5 - 195582420 TGTCA
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   81266 5 +    118900 TGTCA
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 I 10
s Hapalemur_alaotrensis.k141_1280836                         7512 5 +     10286 TGTCA
i Hapalemur_alaotrensis.k141_1280836                    C 0 I 10
s Hapalemur_gilberti.k141_279011                             5993 5 -     11661 TGTCA
i Hapalemur_gilberti.k141_279011                        C 0 I 10
s Hapalemur_griseus.k141_1387522                            11317 5 +     56096 TGTCA
i Hapalemur_griseus.k141_1387522                        C 0 I 10
s Hapalemur_meridionalis.k141_186231                        34566 5 -     42470 TGTCA
i Hapalemur_meridionalis.k141_186231                    C 0 I 10
s Hapalemur_occidentalis.k141_797938                        51192 5 -     54384 TGTCA
i Hapalemur_occidentalis.k141_797938                    C 0 I 10
s Helogale_parvula.HelPar_flattened_line_22962              24923 5 +     53719 TATTC
i Helogale_parvula.HelPar_flattened_line_22962          C 0 I 10
s Hemitragus_hylocrius.HemHyl_scaffold_16669                35733 5 -     91191 TGTCC
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 I 10
s Heterocephalus_glaber.JH602058.1                        2563635 5 +  31725842 TGCTA
i Heterocephalus_glaber.JH602058.1                      C 0 I 10
s Heterohyrax_brucei.HetBruBak_scaffold_25354               65212 5 +     73687 TGTCC
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 I 10
s Hippopotamus_amphibius.HipAmp_scaffold_1308              153001 5 +    277961 TGCCC
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 I 10
s Hipposideros_armiger.JXIK01001085.1                      286470 5 -    477199 TGTCC
i Hipposideros_armiger.JXIK01001085.1                   C 0 I 10
s Hipposideros_galeritus.HipGal_scaffold_52959               3743 5 +     26078 TGTCC
i Hipposideros_galeritus.HipGal_scaffold_52959          C 0 I 10
s Hoolock_leuconedys.ctg79                                     10648 5 -   7690867 TGTCA
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 25358 5 -     67322 TGTCC
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 I 10
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           23283 5 -    119109 TGCTA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 I 10
s Hylobates_abbotti.k141_1620906                              157 5 -     33653 TCTCA
i Hylobates_abbotti.k141_1620906                        C 0 C 0
s Hylobates_agilis.k141_1136966                              1228 5 +      9785 TGTCA
i Hylobates_agilis.k141_1136966                         C 0 C 0
s Hylobates_klossii.k141_468230                              4708 5 +      5464 TGTCA
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14630054 5 -  25970782 TGTCA
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            2605 5 +      4161 TCTCA
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                    11559 5 +     22540 TGCTA
i Hystrix_cristata.HysCri_scaffold_50788                C 0 I 10
s Ictidomys_tridecemlineatus.JH393315.1                   7131820 5 +  13083262 TCTCA
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 I 10
s Indri_indri.k141_2197838                                   3051 5 +      3484 TGTCA
i Indri_indri.k141_2197838                              C 0 I 10
s Inia_geoffrensis.IniGeo_flattened_line_66725              15142 5 +     17520 TGTCC
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 I 10
s Jaculus_jaculus.JH725517.1                              8580621 5 +  11848649 TATCA
i Jaculus_jaculus.JH725517.1                            C 0 I 10
s Kogia_breviceps.KogBre_flattened_line_35920               29770 5 +     37189 TGTCC
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 I 11
s Lagothrix_lagothricha.k141_12968                          55479 5 -    147782 TGTCA
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    8832 5 +     26176 TATAC
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 I 10
s Lemur_catta.scaffold_1                                258412870 5 - 285822530 TGTCA
i Lemur_catta.scaffold_1                                C 0 I 10
s Lepilemur_ankaranensis.k141_884009                        30190 5 +     39228 TATCA
i Lepilemur_ankaranensis.k141_884009                    C 0 I 10
s Lepilemur_dorsalis.k141_134267                            59554 5 +     63517 TATCA
i Lepilemur_dorsalis.k141_134267                        C 0 I 10
s Lepilemur_ruficaudatus.k141_574529                        37938 5 -     38897 TATCA
i Lepilemur_ruficaudatus.k141_574529                    C 0 I 10
s Lepilemur_septentrionalis.k141_710646                      3980 5 -     13103 TATCA
i Lepilemur_septentrionalis.k141_710646                 C 0 I 10
s Leptonychotes_weddellii.KB714749.1                      3094192 5 -   3498232 TGTCC
i Leptonychotes_weddellii.KB714749.1                    C 0 I 10
s Lepus_americanus.LepAme_scaffold_1475380                    216 5 -       358 TGTCA
i Lepus_americanus.LepAme_scaffold_1475380              I 10 I 10
s Lipotes_vexillifer.KE558548.1                            142070 5 +   3060487 TGTCC
i Lipotes_vexillifer.KE558548.1                         C 0 I 10
s Lophocebus_aterrimus.ctg55                             19253949 4 +  19376315 -GTCA
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           16708 5 +     84689 TGTCA
i Loris_lydekkerianus.k141_550999                       C 0 I 10
s Loris_tardigradus.ctg97                                 3784441 5 +   6799190 TGTCA
i Loris_tardigradus.ctg97                               C 0 I 10
s Loxodonta_africana.GL010040.1                          20600778 5 -  62548349 TGTCC
i Loxodonta_africana.GL010040.1                         C 0 I 10
s Lycaon_pictus.CM007556.1                               11097443 5 +  39895028 TGTCc
i Lycaon_pictus.CM007556.1                              C 0 I 10
s Macaca_arctoides.k141_2201161                             25698 4 +     74745 -GTCA
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12712161 4 +  12821369 -GTCA
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                4734 4 -     26467 -GTCA
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           52605 4 +     63263 -GTCA
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 4715 4 -     26361 -GTCA
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_2667654                                1018 4 -      5626 -GTCA
i Macaca_leonina.k141_2667654                           C 0 C 0
s Macaca_maura.k141_251854                                  51134 4 -     79256 -GTCA
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196041232 4 + 196197964 -GTCA
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11451402 4 +  11645122 -GTCA
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                  10088 4 -     46448 -GTCA
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                7750 4 -     13212 -GTCA
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 21431 4 -     55006 -GTCA
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43846853 4 +  43892939 -GTCA
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               22716 4 -     24607 -GTCA
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                              10085 4 -     27140 -GTCA
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                704149 5 +    802869 TGTCC
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 I 10
s Mandrillus_leucophaeus.scaffold125                     43443118 4 -  43563597 -GTCA
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4455917 4 -   4543643 -GTCA
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            154432 5 +    252755 TGTCC
i Manis_javanica.JSZB01003966.1                         C 0 I 10
s Manis_pentadactyla.KN017078.1                             42030 5 +     58827 TGTCC
i Manis_pentadactyla.KN017078.1                         C 0 I 10
s Marmota_marmota.CZRN01000005.1                         36879686 5 +  64221397 TCTCA
i Marmota_marmota.CZRN01000005.1                        C 0 I 10
s Megaderma_lyra.MegLyr_scaffold_3562                       67948 5 -    234502 TGTCC
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 I 10
s Mellivora_capensis.MelCap_flattened_line_15433             8840 5 -     87323 TGTCC
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 I 10
s Meriones_unguiculatus.MerUng_scaffold_9483                 3649 5 +    115071 TGTCA
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 I 10
s Mesocricetus_auratus.KB708139.1                         1053286 5 -  26018355 TGTCA
i Mesocricetus_auratus.KB708139.1                       C 0 I 10
s Mesoplodon_bidens.MesBid_scaffold_96348                    4733 5 -     12939 TGTCC
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 I 10
s Microcebus_murinus.CM007691.1                          16515912 5 +  47401472 TGTCA
i Microcebus_murinus.CM007691.1                         C 0 I 10
s Microgale_talazaci.MicTal_scaffold_34660                  46959 5 -     48017 TGCCC
i Microgale_talazaci.MicTal_scaffold_34660              C 0 I 10
s Micronycteris_hirsuta.MicHir_scaffold_37978               27092 5 -     32043 TGTCC
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 I 10
s Microtus_ochrogaster.CM001673.1                        22826251 5 -  98408828 TGTCA
i Microtus_ochrogaster.CM001673.1                       C 0 I 10
s Miniopterus_natalensis.LDJU01000022.1                   8215460 5 +  10048721 TGTCC
i Miniopterus_natalensis.LDJU01000022.1                 C 0 I 10
s Miniopterus_schreibersii.MinSch_scaffold_24116            39919 5 +     45743 TGTCC
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 I 10
s Miopithecus_ogouensis.k141_2935907                         7667 5 +     29742 TGTCA
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        19594 5 -    104932 TGTCC
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 I 10
s Mirza_zaza.k141_593947                                     6606 5 -     12809 TGTCA
i Mirza_zaza.k141_593947                                C 0 I 10
s Monodon_monoceros.MonMon_M_scaffold_5598                 152508 5 +    154973 TGTCC
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 I 10
s Mormoops_blainvillei.MorMeg_scaffold_2952                165617 5 +    265003 TGTCC
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 I 10
s Moschus_moschiferus.MosMos_scaffold_78805                  9304 5 -     19904 TGTCC
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 I 10
s Mungos_mungo.MunMun_flattened_line_8729                  152652 5 -    168139 TATTC
i Mungos_mungo.MunMun_flattened_line_8729               C 0 I 10
s Murina_feae.MurFea_scaffold_2254                          26444 5 -    100666 TATAC
i Murina_feae.MurFea_scaffold_2254                      C 0 I 10
s Mus_caroli.LT608236.1                                  70773534 5 +  92629107 tgTCG
i Mus_caroli.LT608236.1                                 C 0 I 10
s Mus_musculus.chr16                                     75495595 5 +  98207768 TGTCG
i Mus_musculus.chr16                                    C 0 I 10
s Mus_pahari.LT608305.1                                  67562321 5 +  89017189 TGTCT
i Mus_pahari.LT608305.1                                 C 0 I 10
s Mus_spretus.CM004110.1                                 74338303 5 +  97876770 TGTCG
i Mus_spretus.CM004110.1                                C 0 I 10
s Muscardinus_avellanarius.MusAve_scaffold_9643             16716 5 +     98495 TGTCA
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 194 I 10
s Mustela_putorius.JH417978.1                             4430943 5 -  28371801 TGTCC
i Mustela_putorius.JH417978.1                           C 0 I 10
s Myocastor_coypus.MyoCoy_scaffold_3653                     98017 5 -    117718 TGATA
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 I 11
s Myotis_brandtii.KE161952.1                               973465 5 +   8389877 TATAC
i Myotis_brandtii.KE161952.1                            C 0 I 10
s Myotis_davidii.KB114863.1                               5024541 5 +   6462685 TATGC
i Myotis_davidii.KB114863.1                             C 0 I 10
s Myotis_lucifugus.GL429887.1                             3470962 5 -   3747815 TATAC
i Myotis_lucifugus.GL429887.1                           C 0 I 10
s Myotis_myotis.MyoMyo_scaffold_6123                        16199 5 +     66751 TATGC
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 I 10
s Myrmecophaga_tridactyla.MyrTri_scaffold_12795               563 1 -     87886 T----
i Myrmecophaga_tridactyla.MyrTri_scaffold_12795         C 0 I 9
s Nannospalax_galili.KL201303.1                            126001 5 +    362372 TGTCA
i Nannospalax_galili.KL201303.1                         C 0 I 10
s Nasalis_larvatus.k141_153429                              11928 5 +     48152 TGTCA
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4492985 5 -  14209539 TGTCC
i Neomonachus_schauinslandi.NINY01007774.1              C 0 I 10
s Neophocaena_asiaeorientalis.KZ688543.1                  3957099 5 -   4490290 TGTCC
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 I 10
s Noctilio_leporinus.NocLep_scaffold_12062                  52926 5 +     94413 TGTCC
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 I 10
s Nomascus_annamensis.k141_881190                              35 5 -      2113 TGTCA
i Nomascus_annamensis.k141_881190                       C 0 C 0
s Nomascus_concolor.k141_256540                              8336 5 -      8966 TGTCA
i Nomascus_concolor.k141_256540                         C 0 C 0
s Nomascus_gabriellae.k141_202556                              98 5 -      1580 TGTCA
i Nomascus_gabriellae.k141_202556                       C 0 C 0
s Nomascus_siki_b.tarseq_453                             7589 5 +     12787 TGTCA
i Nomascus_siki_b.tarseq_453                        C 0 C 0
s Nomascus_siki_a.k141_421408                                  2191 5 +     16235 TGTCA
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                40318 5 +   3668941 TGTCC
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 I 10
s Nycticebus_bengalensis.LG16                            65573501 5 -  95554990 TGTCA
i Nycticebus_bengalensis.LG16                           C 0 I 7
s Nycticebus_coucang.k141_6040852                            1137 5 +      1868 TGTCA
i Nycticebus_coucang.k141_6040852                       C 0 I 7
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65681680 5 +  89412551 TGTCA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 I 10
s Ochotona_princeps.JH802095.1                            5001525 5 -  23139505 TGACA
i Ochotona_princeps.JH802095.1                          C 0 I 11
s Octodon_degus.JH651621.1                                3693161 5 +  10294119 TGCTA
i Octodon_degus.JH651621.1                              C 0 I 10
s Odobenus_rosmarus.KB229369.1                             687235 5 -   3126709 TGTCC
i Odobenus_rosmarus.KB229369.1                          C 0 I 10
s Odocoileus_virginianus.KZ101650.1                       1086297 5 +   1425656 TGTCC
i Odocoileus_virginianus.KZ101650.1                     C 0 I 10
s Okapia_johnstoni.LVCL01S0017931.1                         44366 5 +     78940 TGTCC
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 I 10
s Ondatra_zibethicus.OndZib_scaffold_6821                  132057 5 +    145789 TGTCA
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 I 10
s Onychomys_torridus.OnyTor_scaffold_12578                  44999 5 +     62360 TGTCA
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 I 10
s Orcinus_orca.KB316965.1                                 7230773 5 -   7562323 TGTCC
i Orcinus_orca.KB316965.1                               C 0 I 10
s Orycteropus_afer.OryAfe_flattened_line_371885              1992 4 +      3658 TGTC-
i Orycteropus_afer.OryAfe_flattened_line_371885         C 0 I 10
s Oryctolagus_cuniculus.CM000803.1                      141885486 5 + 163896628 TGTCA
i Oryctolagus_cuniculus.CM000803.1                      C 0 I 10
s Otocyon_megalotis.JAEUCK010005121.1                      317450 5 -    505867 TGTCC
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 I 10
s Otolemur_crassicaudatus.k141_505435                        6626 5 -     53940 TGTCA
i Otolemur_crassicaudatus.k141_505435                   C 0 I 10
s Otolemur_garnettii.GL873528.1                          18014591 5 -  38779656 TGTCA
i Otolemur_garnettii.GL873528.1                         C 0 I 10
s Ovis_aries.CM001582.2                                 134085515 5 - 275406953 TGTCC
i Ovis_aries.CM001582.2                                 C 0 I 10
s Ovis_canadensis.OviCan_scaffold_6251                      86761 5 +    140051 TGTCC
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 I 10
s Pan_paniscus.KQ411703.1                                   20542 5 +     41252 TGTCA
i Pan_paniscus.KQ411703.1                               I 322 I 281
s Pan_troglodytes.KZ622857.1                               334939 5 +    772158 TGTCA
i Pan_troglodytes.KZ622857.1                            I 375 I 325
s Panthera_onca.PanOnc_flattened_line_1615                  42211 5 +    295523 TGTCC
i Panthera_onca.PanOnc_flattened_line_1615              C 0 I 10
s Panthera_pardus.KV860323.1                              3646025 5 +  18214204 TGTCC
i Panthera_pardus.KV860323.1                            C 0 I 10
s Panthera_tigris.KE721879.1                              5035662 5 -   6340057 TGTCC
i Panthera_tigris.KE721879.1                            C 0 I 10
s Pantholops_hodgsonii.KE114631.1                         1074400 5 -   1292953 TGTCC
i Pantholops_hodgsonii.KE114631.1                       C 0 I 10
s Papio_anubis.CM001492.2                               188161910 4 - 188283584 -GTCA
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              5000 4 +     25005 -GTCA
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47519282 4 +  47705337 -GTCA
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 73273 4 -    104429 -GTCA
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   11805 4 +     14967 -GTCA
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_899489                                   475 4 -     13896 -GTCA
i Papio_ursinus.k141_899489                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    123677 5 -    135482 TGTCC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 I 10
s Perodicticus_ibeanus.k141_117958                          12281 5 -     23713 TGTCA
i Perodicticus_ibeanus.k141_117958                      C 0 I 10
s Perodicticus_potto.k141_1136815                           13432 5 +     61070 TGTCA
i Perodicticus_potto.k141_1136815                       C 0 I 10
s Perognathus_longimembris.PerPac_flattened_line_19359       3711 5 +     49596 TGTGA
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 I 10
s Peromyscus_maniculatus.KI615458.1                       2840813 5 -   3366660 TGTCA
i Peromyscus_maniculatus.KI615458.1                     C 0 I 10
s Petromus_typicus.PetTyp_scaffold_33007                    19568 5 -     36578 TGCTA
i Petromus_typicus.PetTyp_scaffold_33007                C 0 I 10
s Phocoena_phocoena.PhoPho_flattened_line_53071              5236 5 +      8220 TGTCC
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 I 10
s Piliocolobus_badius.k141_1987485                           5468 5 -      5908 TGTCA
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       6087 5 -     17985 TGTCA
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            5454 5 +      7694 TGTCA
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26743937 5 +  26888534 TGTCA
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306           101695 5 +    112873 TATAC
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 I 10
s Platanista_gangetica.PlaMin_flattened_line_72990          11741 5 +     21690 TGTCC
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 I 10
s Plecturocebus_bernhardi.k141_959214                       27567 5 +     44506 TGTCA
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        27780 5 +     67491 TGTCA
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      18019 5 -     98129 TGTCA
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     27620 5 +    147771 TGTCA
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         4255 5 -     43940 TGTCA
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          8338 5 -     55515 TGTCA
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         27692 5 +    152463 TGTCA
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       5496 5 -    119457 TGTCA
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         17414 5 +    134592 TGTCA
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          28002 5 -     75465 TGTCA
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              192641 5 -    373494 TGTCA
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19813290 5 +  19899266 TGTCA
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               9210 5 -     15069 TGTCA
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              9325 5 +     14865 TGTCA
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                6319 5 -      9567 TGTCC
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 I 10
s Prolemur_simus.MPIZ01000048.1                           6854246 5 +  12164890 TGTCA
i Prolemur_simus.MPIZ01000048.1                         C 0 I 10
s Propithecus_coquerelli.NW_012147997.1                    673822 5 -   2312742 TGTCA
i Propithecus_coquerelli.NW_012147997.1                 C 0 I 10
s Propithecus_coronatus.k141_1353159                         9347 5 +     11805 TGTCA
i Propithecus_coronatus.k141_1353159                    C 0 I 10
s Propithecus_diadema.k141_577245                           48682 5 +     52369 TGTCA
i Propithecus_diadema.k141_577245                       C 0 I 10
s Propithecus_edwardsi.k141_1317105                         41069 5 -     44753 TGTCA
i Propithecus_edwardsi.k141_1317105                     C 0 I 10
s Propithecus_perrieri.k141_7554                            22992 5 +     27322 TGTCA
i Propithecus_perrieri.k141_7554                        C 0 I 10
s Propithecus_tattersalli.k141_907138                       22638 5 -     53241 TGTCA
i Propithecus_tattersalli.k141_907138                   C 0 I 10
s Propithecus_verreauxi.k141_158021                         44901 5 -     48185 TGTCA
i Propithecus_verreauxi.k141_158021                     C 0 I 10
s Psammomys_obesus.NESX01026517.1                           40625 5 +     77221 TGTCA
i Psammomys_obesus.NESX01026517.1                       C 0 I 10
s Pteronotus_parnellii.KE867983.1                            8275 5 -     27784 TGTCC
i Pteronotus_parnellii.KE867983.1                       C 0 I 10
s Pteronura_brasiliensis.PteBra_flattened_line_1343        252589 5 -    344369 TGTCC
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 I 10
s Pteropus_alecto.KB031157.1                             13249244 5 -  17261082 TGTCC
i Pteropus_alecto.KB031157.1                            C 0 I 10
s Pteropus_vampyrus.KN525959.1                             607195 5 -   3946241 TGTCC
i Pteropus_vampyrus.KN525959.1                          C 0 I 10
s Puma_concolor.QAVW01000427.1                          131542356 5 - 161321710 TGTCC
i Puma_concolor.QAVW01000427.1                          C 0 I 10
s Pygathrix_cinerea.k141_374971                             33316 5 +     56732 TGTCA
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6809813 5 +   6970761 TGTCA
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             9202 5 +     18040 TGTCA
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                23145 5 +     68503 TGTCC
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 I 10
s Rattus_norvegicus.chr11                                13921016 5 +  90463843 TGTCA
i Rattus_norvegicus.chr11                               C 0 I 10
s Rhinolophus_sinicus.LVEH01000179.1                      1795076 5 +   2252614 TGTGC
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 I 10
s Rhinopithecus_bieti.k119_554384                            3581 5 -     17045 TGTCA
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206381068 5 - 206558726 TGTCA
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44859971 5 -  45163003 TGTCA
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                22588 5 +    109198 CGTCC
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 I 10
s Saiga_tatarica.SaiTat_scaffold_371890                      4028 5 -      4338 TGTCC
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 I 10
s Saimiri_boliviensis.NW_024100938.1                     15678013 5 -  43202129 TGTCA
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        9927 5 +     34089 TGTCA
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              9866 5 -     60842 TGTCA
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              9960 5 +     67014 TGTCA
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              9937 5 +     60816 TGTCA
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 9874 5 -     76454 TGTCA
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17346645 5 -  30362882 TGTCA
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         25966 5 -     62485 TGTCA
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   41860 5 -    114521 TGTCT
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 I 10
s Semnopithecus_entellus.k141_1572367                        6817 5 +     15331 TGTCA
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      12192 5 +     20762 TGTCA
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         122196 5 +    130994 TGTCA
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           40976 5 +     46263 TGTCA
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     34121 5 +     42640 TGTCA
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        17143 5 +     30600 TGTCA
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  107175 5 -    120886 TGTCA
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 I 10
s Solenodon_paradoxus.SolPar_flattened_line_1012            26515 5 +    739146 CATCC
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 I 10
s Sorex_araneus.JH798170.1                               17776847 4 -  27805282 TGTT-
i Sorex_araneus.JH798170.1                              C 0 I 10
s Spermophilus_dauricus.KZ294190.1                        2245521 5 +   2842873 TCTCA
i Spermophilus_dauricus.KZ294190.1                      C 0 I 10
s Spilogale_gracilis.SpiGra_flattened_line_905             241359 5 -    276980 TGTCC
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 I 10
s Suricata_suricatta.SurSur_flattened_line_20339            35553 5 +     62062 TATTC
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 I 10
s Sus_scrofa.CM000824.4                                 189277538 5 + 218635234 TGTCC
i Sus_scrofa.CM000824.4                                 C 0 I 10
s Tadarida_brasiliensis.TadBra_scaffold_61492                4540 5 +     20549 TTCCC
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 I 10
s Tamandua_tetradactyla.TamTet_scaffold_26877               18797 1 +     45698 T----
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 I 9
s Tapirus_indicus.TapInd_scaffold_176                      813148 5 +   1148477 TGTCC
i Tapirus_indicus.TapInd_scaffold_176                   C 0 I 10
s Tapirus_terrestris.TapTer_scaffold_14939                  63788 5 +     99546 TGTCC
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 I 10
s Theropithecus_gelada.CM009951.1                       194013443 4 - 194193292 -GTCA
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             40666 4 -     47444 -GTTG
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         I 76 I 10
s Tolypeutes_matacus.TolMat_scaffold_475685                  1957 1 -      3104 T----
i Tolypeutes_matacus.TolMat_scaffold_475685             C 0 I 9
s Tonatia_saurophila.TonSau_scaffold_3334                  140282 5 -    259118 TGTCC
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 I 10
s Trachypithecus_auratus.k141_738098                        30464 5 +     38948 TGTCA
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   24024 5 -     32910 TGTCA
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      5925 5 -     12939 TGTCA
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       5353 5 -     14244 TGTCA
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           46746 5 -     54611 TGTCA
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        4547 5 -     11566 TGTCA
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     6731 5 -     15592 TGTCA
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          5383 5 +     14371 TGTCA
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   3669 5 +     12481 TGTCA
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        3650 5 -     24393 TGTCA
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       8794 5 -     28054 TGTCA
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44663578 5 -  44834318 TGTCA
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       5890 5 +     13828 TGTCA
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                  11623 5 +     90398 TGTCC
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 I 10
s Trichechus_manatus.JH594618.1                          16091855 5 +  31416278 TGTCC
i Trichechus_manatus.JH594618.1                         C 0 I 10
s Tupaia_chinensis.KB320831.1                             2802564 5 -   3938065 TGACA
i Tupaia_chinensis.KB320831.1                           C 0 I 10
s Tupaia_tana.TupTan_flattened_line_68454                   11388 5 +     13056 TGACA
i Tupaia_tana.TupTan_flattened_line_68454               C 0 I 10
s Tursiops_truncatus.MRVK01000923.1                      69319503 5 -  96451834 TGTCC
i Tursiops_truncatus.MRVK01000923.1                     C 0 I 10
s Uropsilus_gracilis.UroGra_scaffold_4115                    2215 5 +    136657 TATCA
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 I 10
s Ursus_maritimus.KK498671.1                              6523005 5 +  28682327 TGTCC
i Ursus_maritimus.KK498671.1                            C 0 I 10
s Varecia_rubra.k141_432109                                 10913 5 -     20643 TGCCA
i Varecia_rubra.k141_432109                             C 0 I 10
s Varecia_variegata.k141_775891                             30448 5 -     33872 TGCCA
i Varecia_variegata.k141_775891                         C 0 I 10
s Vicugna_pacos.KN269600.1                                1530539 5 -   2331223 TGTCC
i Vicugna_pacos.KN269600.1                              C 0 I 10
s Vulpes_lagopus.VulLag_flattened_line_2045                146677 5 -    281493 TGTCC
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 I 10
s Xerus_inauris.XerIna_scaffold_7898                       133017 5 -    134049 TGTCA
i Xerus_inauris.XerIna_scaffold_7898                    C 0 I 10
s Zalophus_californianus.ZalCal_flattened_line_4097        222096 5 -    227762 TGTCT
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 I 10
s Zapus_hudsonius.ZapHud_scaffold_202118                     2616 5 -      3360 TGTCA
i Zapus_hudsonius.ZapHud_scaffold_202118                C 0 I 10
s Ziphius_cavirostris.ZipCav_flattened_line_60625            4096 5 -     13665 TGTCC
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 I 10
e Hylobates_pileatus_a.tarseq_592                             37267 2881 -     60944 I
e Tarsius_wallacei.k141_48636                               64696 0 +     65473 C
e Tarsius_lariang.k141_609102                               31387 0 +     42269 C
e Pithecia_vanzolinii.k141_831006                           15424 0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514 0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521 0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292 0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093 0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038 0 +     78826 C
e Pithecia_albicans.k141_991845                             45662 0 -     61926 C
e Cephalopachus_bancanus.k141_702587                        12545 0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530 0 +    345090 C
e Symphalangus_syndactylus.tarseq_24                        20205 0 -  13920577 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               19029 5 +    209709 tttg--a
s Acinonyx_jubatus.LLWD01000356.1                         2041884 6 +   3721120 TTCGT-A
i Acinonyx_jubatus.LLWD01000356.1                       I 10 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    119537 6 -    189883 TTTG-GA
i Acomys_cahirinus.AcoCah_scaffold_1625                 I 10 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10665753 6 +  23371972 TTTGT-A
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 10 I 16
s Ailurus_fulgens.LNAC01000003.1                          7102705 3 -  16596857 TTT----
i Ailurus_fulgens.LNAC01000003.1                        I 10 C 0
s Allactaga_bullata.AllBul_scaffold_141108                   2885 6 -      7259 TTTG-GA
i Allactaga_bullata.AllBul_scaffold_141108              I 15 I 134
s Allenopithecus_nigroviridis.k141_2469532                   6925 6 -     60446 TTTG-GA
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         7639 6 -     29318 TTTG-GA
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         6577 6 +     38766 TTTG-GA
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          7535 6 -     80423 TTTG-GA
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              2478 6 +     19852 TTTG-GA
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                4694 6 -     12443 TTTG-GA
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                             2021 6 +      5070 TTTG-GA
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_macconnelli.k141_2318944                          4503 6 -     24210 TTTG-GA
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_494922                             1007 6 -      8325 TTTG-GA
i Alouatta_nigerrima.k141_494922                        C 0 C 0
s Alouatta_palliata.k141_405616                              6902 6 +     16794 TTTG-GA
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_347198                              954 6 +      9111 TTTG-GA
i Alouatta_puruensis.k141_347198                        C 0 C 0
s Alouatta_seniculus.k141_790278                             6202 6 -      9835 TTTG-GA
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3528928 6 +   4113121 TTCA-GA
i Ammotragus_lervia.NIVO01013474.1                      I 10 I 2
s Anoura_caudifer.AnoCau_scaffold_422                      394879 6 -    631301 CTCA-GA
i Anoura_caudifer.AnoCau_scaffold_422                   I 10 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             6158 6 +     55446 TTCA-GA
i Antilocapra_americana.AntAmePen_scaffold_27338        I 10 I 2
s Aotus_azarae.k141_3170768                                 67809 6 +     78111 TTTG-GA
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                           10750 6 +     22701 TTTG-GA
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5754719 6 +   9889416 TTTG-GA
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                            11298 6 -    104377 TTTG-GA
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                              11327 6 +     23246 TTTG-GA
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     3948 6 +     11424 TTTG-AA
i Aplodontia_rufa.AprRuf_scaffold_101456                I 10 C 0
s Arctocebus_calabarensis.k141_587554                        7907 6 +      9265 TCTG-GA
i Arctocebus_calabarensis.k141_587554                   I 10 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                13176 4 -     29036 CTCA---
i Artibeus_jamaicensis.ArtJam_scaffold_41619            I 10 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9544612 6 +  39197703 TTTG-GA
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             65886 6 +     85812 TTTG-GA
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                16896 6 +     89302 TTTG-GA
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             21400 6 -     58268 TTTG-GA
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             69394 6 +    119057 TTTG-GA
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              11363 6 -     25888 TTTG-GA
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                12455 6 -     16375 CTTG-GA
i Avahi_laniger.k141_2840928                            I 10 C 0
s Avahi_peyrierasi.k141_798820                               6071 6 +      6337 CTTG-GA
i Avahi_peyrierasi.k141_798820                          I 10 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26386346 6 +  51448160 TTCA-GA
i Balaenoptera_acutorostrata.KI537095.1                 I 10 I 16
s Balaenoptera_bonaerensis.DF502048.1                       11519 6 -     13118 TTCA-GA
i Balaenoptera_bonaerensis.DF502048.1                   I 10 I 16
s Beatragus_hunteri.BeaHun_scaffold_21644                   51128 6 -     72089 TTCA-GA
i Beatragus_hunteri.BeaHun_scaffold_21644               I 10 I 2
s Bison_bison.KN264915.1                                   305853 6 -   6870073 TTCA-GA
i Bison_bison.KN264915.1                                I 10 I 2
s Bos_indicus.CM003021.1                                 22959959 6 + 161108492 TTCA-GA
i Bos_indicus.CM003021.1                                I 10 I 2
s Bos_mutus.JH883513.1                                     422138 6 +    998990 TTCA-GA
i Bos_mutus.JH883513.1                                  I 10 I 2
s Bos_taurus.CM000177.6                                  22668611 6 + 158972876 TTCA-GA
i Bos_taurus.CM000177.6                                 I 10 I 2
s Cacajao_ayresi.k141_724503                               119226 6 -    171031 TTTG-GA
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 18246 6 +    125063 TTTG-GA
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                20293 6 -    216513 TTTG-GA
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       12836 6 -    134917 TTTG-GA
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3225446 6 -   8989139 ttta-aa
i Camelus_bactrianus.KN276303.1                         I 10 C 0
s Camelus_dromedarius.KN271192.1                           403146 6 -  15254737 ttta-aa
i Camelus_dromedarius.KN271192.1                        I 10 C 0
s Camelus_ferus.KB016973.1                                2978884 6 +   6889770 ttta-aa
i Camelus_ferus.KB016973.1                              I 10 C 0
s CanFam4.chr31                                          11528607 6 +  39901454 TTTTT-A
i CanFam4.chr31                                         I 10 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   23581 6 +     87036 TTTTT-A
i Canis_lupus_VD.CanFam_VD_scaffold_16982               I 10 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11275504 6 -  35597290 tttt-ta
i Canis_lupus_dingo.QKWQ01001993.1                      I 10 C 0
s Canis_lupus_familiaris.chr31                           11098002 6 +  39895921 tttt-ta
i Canis_lupus_familiaris.chr31                          I 10 C 0
s Canis_lupus_orion.HG994411.1                           16464786 6 -  44759192 tttt-ta
i Canis_lupus_orion.HG994411.1                          I 10 C 0
s Capra_aegagrus.CM003214.1                              21336362 6 + 157394656 TTCA-GA
i Capra_aegagrus.CM003214.1                             I 10 I 2
s Capra_hircus.CM004562.1                               135714715 6 - 157403528 TTCA-GA
i Capra_hircus.CM004562.1                               I 10 I 2
s Carollia_perspicillata.CarPer_scaffold_4436               64160 6 +     67245 CTCA-GA
i Carollia_perspicillata.CarPer_scaffold_4436           I 10 C 0
s Castor_canadensis.CasCan_scaffold_1326                     1453 6 -    202837 TTTG-GA
i Castor_canadensis.CasCan_scaffold_1326                I 10 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   165166 6 -    276539 TTCA-GA
i Catagonus_wagneri.CatWag_scaffold_1305                I 10 I 15
s Cavia_aperea.AVPZ01000278.1                            15791697 6 -  24422027 TTTG-GA
i Cavia_aperea.AVPZ01000278.1                           I 10 C 0
s Cavia_porcellus.DS562889.1                             15803642 6 -  24440124 TTTG-GA
i Cavia_porcellus.DS562889.1                            I 10 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       181814 6 +    436027 TTTG-GA
i Cavia_tschudii.CavTsc_scaffold_488                    I 10 C 0
s Cebus_albifrons.Contig22                               18896962 6 -  29618158 TTTG-GA
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                13612 6 -     26817 TTTG-GA
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                17855 6 +     25043 TTTG-GA
i Cebus_unicolor.k141_239009                            C 0 C 0
s Ceratotherium_simum.JH767818.1                          4370431 6 +   7569818 TTAGT-A
i Ceratotherium_simum.JH767818.1                        I 10 I 17
s Ceratotherium_simum_cottoni.CerCot_scaffold_171732          588 6 +      8380 TTAGT-A
i Ceratotherium_simum_cottoni.CerCot_scaffold_171732    I 10 I 17
s Cercocebus_atys.KQ010443.1                              6560864 6 +   6739814 TTTG-GA
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      32341 6 +     60454 TTTG-GA
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          7545 6 -     21101 TTTG-GA
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         64855 6 -    107033 TTTG-GA
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        7716 6 -     17608 TTTG-GA
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          4884 6 +     45019 TTTG-GA
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           5160 6 +     15177 TTTG-GA
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          7766 6 +     16677 TTTG-GA
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           29962 6 +     35983 TTTG-GA
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11996487 6 +  12117833 TTTG-CA
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46483469 6 +  46592721 TTTG-GA
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                       1580 6 -     27215 TTTG-GA
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       7780 6 +     35577 TTTG-GA
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        7574 6 -     25661 TTTG-GA
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        7746 6 -     17744 TTTG-GA
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        27115 6 +     37128 TTTG-GA
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           6114 6 -      6963 TTTG-AG
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      I 9 I 17
s Cheirogaleus_major.k141_1157592                           64671 6 -     68416 TTTG-GA
i Cheirogaleus_major.k141_1157592                       I 10 C 0
s Cheirogaleus_medius.k141_854352                             973 6 +     27737 TTTG-GA
i Cheirogaleus_medius.k141_854352                       I 10 C 0
s Cheracebus_lucifer.k141_619653                            10920 6 -     18223 TTTG-GA
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              2661 6 +    188999 TTTG-GA
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           46960 6 +     57117 TTTG-GA
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          51640 6 +     54541 TTTG-GA
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15966387 6 +  43084221 TTTG-GA
i Chinchilla_lanigera.JH721867.1                        I 10 C 0
s Chiropotes_israelita.k141_1189915                         76440 6 +    196370 TTTG-GA
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          20621 6 +     40510 TTTG-GA
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15145300 6 -  15256731 TTTG-GA
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      39764 6 -     53260 TTTG-GA
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101150323 6 + 101219884 TTTG-GA
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                20148 6 -     21363 TTCA-GA
i Choloepus_didactylus.ChoDid_scaffold_36182            I 9 C 0
s Choloepus_hoffmanni.KN194586.1                           765452 6 +    964067 ttca-ga
i Choloepus_hoffmanni.KN194586.1                        I 9 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_304221              3095 4 -      7053 TTTG---
i Chrysochloris_asiatica.ChrAsi_scaffold_304221         I 10 I 1
s Colobus_angolensis.KN985967.1                          10890094 6 +  10971483 TTTG-GA
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147668022 6 + 156195979 TTTG-GA
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            20005 6 +     23629 TTTG-GA
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60624407 6 +  78930452 TCCCT-G
i Condylura_cristata.JH655880.1                         I 10 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         4830 6 -      5782 TTCA-GA
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    I 10 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 284443 6 -    399297 TTTG-GA
i Cricetomys_gambianus.CriGam_scaffold_949              I 10 C 0
s Cricetulus_griseus.LT883672.1                          53036728 6 +  72327488 TTTG-AA
i Cricetulus_griseus.LT883672.1                         I 10 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              4295 6 -     22648 TTCAT-A
i Crocidura_indochinensis.CroInd_scaffold_27484         I 10 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            59820 4 -     70449 TTCA---
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 10 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  216578 6 -    956709 TTTG-GA
i Ctenodactylus_gundi.CteGun_scaffold_447               I 10 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 38105 6 -     67205 CTTG-GA
i Ctenomys_sociabilis.CteSoc_scaffold_19489             I 10 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                22933 6 +     26546 TTTG-GA
i Cuniculus_paca.CunPac_flattened_line_16637            I 10 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             64077 6 -    236241 TTTG-GA
i Dasyprocta_punctata.DasPun_flattened_line_634         I 10 C 0
s Dasypus_novemcinctus.JH568778.1                          187173 6 -   6883506 TTAG-GA
i Dasypus_novemcinctus.JH568778.1                       I 9 I 17
s Daubentonia_madagascariensis.ctg11                     16850618 6 +  31942871 TTTG-GG
i Daubentonia_madagascariensis.ctg11                    I 10 C 0
s Delphinapterus_leucas.KZ290064.1                       80042930 6 -  96802777 TTCA-GA
i Delphinapterus_leucas.KZ290064.1                      I 10 I 16
s Desmodus_rotundus.KZ672188.1                           18703386 6 -  18957592 CTCA-GA
i Desmodus_rotundus.KZ672188.1                          I 10 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 328830 6 +    993696 TTAGT-A
i Dicerorhinus_sumatrensis.PEKH010003161.1              I 10 I 17
s Diceros_bicornis.DicBicMic_scaffold_9545                   9464 6 +    151128 TTAGT-A
i Diceros_bicornis.DicBicMic_scaffold_9545              I 10 I 17
s Dinomys_branickii.DinBra_scaffold_1996                   161999 6 +    228994 TTTG-GA
i Dinomys_branickii.DinBra_scaffold_1996                I 123 C 0
s Dipodomys_ordii.KN672545.1                              3661721 6 +   4240102 TTTG-GA
i Dipodomys_ordii.KN672545.1                            I 10 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  4095 6 -     11986 TTTG-GA
i Dipodomys_stephensi.DipSte_scaffold_84338             I 10 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                42644 4 -     73477 T--G-AA
i Dolichotis_patagonum.DolPat_scaffold_14102            I 10 C 0
s Echinops_telfairi.JH980316.1                           23007080 4 -  44670279 TCTG---
i Echinops_telfairi.JH980316.1                          I 10 I 1
s Eidolon_helvum.KE772537.1                                 15548 6 +     24177 TTCA-GA
i Eidolon_helvum.KE772537.1                             I 10 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1498926 6 +   1727528 TTCA-GA
i Elaphurus_davidianus.JRFZ01086400.1                   I 10 I 2
s Elephantulus_edwardii.JH947210.1                        7836876 4 +  15467074 TTTA---
i Elephantulus_edwardii.JH947210.1                      I 10 I 1
s Ellobius_lutescens.LOEQ01003611.1                        245430 6 -    369425 TTTG-GA
i Ellobius_lutescens.LOEQ01003611.1                     I 10 C 0
s Ellobius_talpinus.LOJH01076532.1                           1782 6 +      9159 TTTG-GA
i Ellobius_talpinus.LOJH01076532.1                      I 10 C 0
s Enhydra_lutris.KZ291749.1                              85879760 3 +  99434291 TTC----
i Enhydra_lutris.KZ291749.1                             I 10 C 0
s Eptesicus_fuscus.JH977687.1                             4711147 6 +   6522550 TTCA-GA
i Eptesicus_fuscus.JH977687.1                           I 10 C 0
s Equus_asinus.JREZ01000062.1                             5858690 6 -   7175178 CTAGT-A
i Equus_asinus.JREZ01000062.1                           I 10 I 17
s Equus_caballus.CM000402.2                              13357176 6 +  41866177 CTCG-CA
i Equus_caballus.CM000402.2                             I 10 I 17
s Equus_przewalskii.ATBW01073585.1                          18666 6 +     92910 CTCG-CA
i Equus_przewalskii.ATBW01073585.1                      I 10 I 17
s Erinaceus_europaeus.JH835290.1                         11544169 6 +  16010500 TCTG-GA
i Erinaceus_europaeus.JH835290.1                        I 10 C 0
s Erythrocebus_patas.Contig8                             48782333 6 -  48907691 TTTG-GA
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          321189 6 +    330699 TTCA-GA
i Eschrichtius_robustus.EscRob_flattened_line_685       I 10 I 16
s Eubalaena_japonica.EubJap_flattened_line_7756             67641 6 +     89355 TTCA-GA
i Eubalaena_japonica.EubJap_flattened_line_7756         I 10 I 16
s Eulemur_albifrons.k141_715837                             10735 6 +     13586 CTTG-GA
i Eulemur_albifrons.k141_715837                         I 10 C 0
s Eulemur_collaris.k141_1015201                              3994 6 -      4292 CTTG-GA
i Eulemur_collaris.k141_1015201                         I 10 C 0
s Eulemur_coronatus.k141_3240342                            17131 6 +     36558 CTTG-GA
i Eulemur_coronatus.k141_3240342                        I 10 C 0
s Eulemur_flavifrons.k141_903901                            13453 6 +     60246 CTTG-GA
i Eulemur_flavifrons.k141_903901                        I 10 C 0
s Eulemur_fulvus.k141_653297                                16938 6 +    109717 CTTG-GA
i Eulemur_fulvus.k141_653297                            I 10 C 0
s Eulemur_macaco.k141_747087                                 4921 6 -     19505 CTTG-GA
i Eulemur_macaco.k141_747087                            I 10 C 0
s Eulemur_mongoz.k141_825972                                21596 6 +     27497 CTTG-GA
i Eulemur_mongoz.k141_825972                            I 10 C 0
s Eulemur_rubriventer.k141_411740                           24052 6 +     26808 CTTG-GA
i Eulemur_rubriventer.k141_411740                       I 10 C 0
s Eulemur_rufus.k141_1620292                                38784 6 +     46535 CTTG-GA
i Eulemur_rufus.k141_1620292                            I 10 C 0
s Eulemur_sanfordi.k141_186399                              21525 6 -     29447 CTTG-GA
i Eulemur_sanfordi.k141_186399                          I 10 C 0
s Felis_catus.CM001386.2                                129901459 6 - 159252932 TTCAT-A
i Felis_catus.CM001386.2                                I 10 C 0
s Felis_catus_fca126.CM031420.1                         129288436 6 - 158578461 TTCGT-A
i Felis_catus_fca126.CM031420.1                         I 10 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 29626 6 +     52776 TTCGT-A
i Felis_nigripes.FelNig_flattened_line_8080             I 10 C 0
s Fukomys_damarensis.KN123630.1                          13899497 6 -  19261668 TTTG-GA
i Fukomys_damarensis.KN123630.1                         I 10 C 0
s Galago_moholi.ctg555                                     216780 6 -    847004 TCTG-GA
i Galago_moholi.ctg555                                  I 10 C 0
s Galago_senegalensis.k141_964197                           19142 6 -     43889 TCTG-GA
i Galago_senegalensis.k141_964197                       I 10 C 0
s Galagoides_demidoff.k141_1769638                          16283 6 +     27357 TCTG-GA
i Galagoides_demidoff.k141_1769638                      I 10 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               161051 6 +    324696 TTTG-GA
i Galeopterus_variegatus.GalVar_scaffold_354            I 10 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    188651 6 -    189561 TTCA-GA
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 10 I 2
s Glis_glis.GliGli_scaffold_79770                           17977 6 -     18683 TTTA-GA
i Glis_glis.GliGli_scaffold_79770                       I 10 C 0
s Gorilla_beringei.k141_111300                              10736 6 -     14630 TTTG-GA
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119657836 6 - 195582420 TTTG-GA
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   81281 6 +    118900 TTTA-GA
i Graphiurus_murinus.GraMur_scaffold_4493               I 10 C 0
s Hapalemur_alaotrensis.k141_1280836                         7527 6 +     10286 CTTG-GA
i Hapalemur_alaotrensis.k141_1280836                    I 10 C 0
s Hapalemur_gilberti.k141_279011                             6008 6 -     11661 CTTG-GA
i Hapalemur_gilberti.k141_279011                        I 10 C 0
s Hapalemur_griseus.k141_1387522                            11332 6 +     56096 CTTG-GA
i Hapalemur_griseus.k141_1387522                        I 10 C 0
s Hapalemur_meridionalis.k141_186231                        34581 6 -     42470 CTTG-GA
i Hapalemur_meridionalis.k141_186231                    I 10 C 0
s Hapalemur_occidentalis.k141_797938                        51207 6 -     54384 CTTG-GA
i Hapalemur_occidentalis.k141_797938                    I 10 C 0
s Helogale_parvula.HelPar_flattened_line_22962              24938 4 +     53719 TTTG---
i Helogale_parvula.HelPar_flattened_line_22962          I 10 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                35748 6 -     91191 TTCA-GA
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 10 I 7
s Heterocephalus_glaber.JH602058.1                        2563650 6 +  31725842 TCTG-GA
i Heterocephalus_glaber.JH602058.1                      I 10 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               65227 4 +     73687 TTTG---
i Heterohyrax_brucei.HetBruBak_scaffold_25354           I 10 I 1
s Hippopotamus_amphibius.HipAmp_scaffold_1308              153016 6 +    277961 TTCA-GA
i Hippopotamus_amphibius.HipAmp_scaffold_1308           I 10 I 16
s Hipposideros_armiger.JXIK01001085.1                      286485 6 -    477199 TTCA-GA
i Hipposideros_armiger.JXIK01001085.1                   I 10 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959               3758 6 +     26078 TTCA-GA
i Hipposideros_galeritus.HipGal_scaffold_52959          I 10 C 0
s Hoolock_leuconedys.ctg79                                     10653 6 -   7690867 TTTGT-A
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 25373 6 -     67322 TTCAT-A
i Hyaena_hyaena.HyaHya_flattened_line_20729             I 10 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           23298 6 -    119109 TTTG-GA
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       I 10 C 0
s Hylobates_abbotti.k141_1620906                              162 6 -     33653 TTTGT-A
i Hylobates_abbotti.k141_1620906                        C 0 C 0
s Hylobates_agilis.k141_1136966                              1233 6 +      9785 TTTGT-A
i Hylobates_agilis.k141_1136966                         C 0 C 0
s Hylobates_klossii.k141_468230                              4713 6 +      5464 TTTGT-A
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14630059 6 -  25970782 TTTGT-A
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            2610 6 +      4161 TTTGT-A
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                    11574 6 +     22540 TTTG-GA
i Hystrix_cristata.HysCri_scaffold_50788                I 10 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7131835 6 +  13083262 TTTG-GA
i Ictidomys_tridecemlineatus.JH393315.1                 I 10 C 0
s Indri_indri.k141_2197838                                   3066 6 +      3484 CTCG-GA
i Indri_indri.k141_2197838                              I 10 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              15157 6 +     17520 TTCA-GA
i Inia_geoffrensis.IniGeo_flattened_line_66725          I 10 I 16
s Jaculus_jaculus.JH725517.1                              8580636 6 +  11848649 TTTG-GA
i Jaculus_jaculus.JH725517.1                            I 10 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               29786 6 +     37189 TTCA-GA
i Kogia_breviceps.KogBre_flattened_line_35920           I 11 I 16
s Lagothrix_lagothricha.k141_12968                          55484 6 -    147782 TTTG-GA
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    8847 6 +     26176 TTCA-GA
i Lasiurus_borealis.LasBor_scaffold_59542               I 10 C 0
s Lemur_catta.scaffold_1                                258412885 6 - 285822530 CTTG-GA
i Lemur_catta.scaffold_1                                I 10 C 0
s Lepilemur_ankaranensis.k141_884009                        30205 6 +     39228 TTTT-GA
i Lepilemur_ankaranensis.k141_884009                    I 10 C 0
s Lepilemur_dorsalis.k141_134267                            59569 6 +     63517 TTTC-GA
i Lepilemur_dorsalis.k141_134267                        I 10 C 0
s Lepilemur_ruficaudatus.k141_574529                        37953 6 -     38897 TTTGT-A
i Lepilemur_ruficaudatus.k141_574529                    I 10 C 0
s Lepilemur_septentrionalis.k141_710646                      3995 6 -     13103 TTTC-GA
i Lepilemur_septentrionalis.k141_710646                 I 10 C 0
s Leptonychotes_weddellii.KB714749.1                      3094207 6 -   3498232 TTCGT-A
i Leptonychotes_weddellii.KB714749.1                    I 10 C 0
s Lepus_americanus.LepAme_scaffold_1475380                    231 6 -       358 TTTG-GA
i Lepus_americanus.LepAme_scaffold_1475380              I 10 I 8
s Lipotes_vexillifer.KE558548.1                            142085 6 +   3060487 TTCA-GA
i Lipotes_vexillifer.KE558548.1                         I 10 I 10
s Lophocebus_aterrimus.ctg55                             19253953 6 +  19376315 TTTG-GA
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           16723 6 +     84689 TCTG-GA
i Loris_lydekkerianus.k141_550999                       I 10 C 0
s Loris_tardigradus.ctg97                                 3784456 6 +   6799190 TCTG-GA
i Loris_tardigradus.ctg97                               I 10 C 0
s Loxodonta_africana.GL010040.1                          20600793 4 -  62548349 CTTG---
i Loxodonta_africana.GL010040.1                         I 10 I 1
s Lycaon_pictus.CM007556.1                               11097458 6 +  39895028 tttt-ta
i Lycaon_pictus.CM007556.1                              I 10 C 0
s Macaca_arctoides.k141_2201161                             25702 6 +     74745 TTTG-GA
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12712165 6 +  12821369 TTTG-GA
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                4738 6 -     26467 TTTG-GA
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           52609 6 +     63263 TTTG-GA
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 4719 6 -     26361 TTTG-GA
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_2667654                                1022 6 -      5626 TTTG-GA
i Macaca_leonina.k141_2667654                           C 0 C 0
s Macaca_maura.k141_251854                                  51138 6 -     79256 TTTG-GA
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196041236 6 + 196197964 TTTG-GA
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11451406 6 +  11645122 TTTG-GA
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                  10092 6 -     46448 TTTG-GA
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                7754 6 -     13212 TTTG-GA
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 21435 6 -     55006 TTTG-GA
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43846857 6 +  43892939 TTTG-GA
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               22720 6 -     24607 TTTG-GA
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                              10089 6 -     27140 TTTG-GA
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                704164 6 +    802869 TTCA-GA
i Macroglossus_sobrinus.MacSob_scaffold_879             I 10 C 0
s Mandrillus_leucophaeus.scaffold125                     43443122 6 -  43563597 TTTG-GA
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4455921 6 -   4543643 TTTG-GA
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            154447 7 +    252755 TTCATTA
i Manis_javanica.JSZB01003966.1                         I 10 I 13
s Manis_pentadactyla.KN017078.1                             42045 7 +     58827 TTCATTA
i Manis_pentadactyla.KN017078.1                         I 10 I 14
s Marmota_marmota.CZRN01000005.1                         36879701 6 +  64221397 TTTG-GA
i Marmota_marmota.CZRN01000005.1                        I 10 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       67963 6 -    234502 TTCA-GA
i Megaderma_lyra.MegLyr_scaffold_3562                   I 10 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             8855 3 -     87323 TTC----
i Mellivora_capensis.MelCap_flattened_line_15433        I 10 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 3664 6 +    115071 TTTA-GA
i Meriones_unguiculatus.MerUng_scaffold_9483            I 10 C 0
s Mesocricetus_auratus.KB708139.1                         1053301 6 -  26018355 TTTG-AA
i Mesocricetus_auratus.KB708139.1                       I 10 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    4748 6 -     12939 TTCA-GA
i Mesoplodon_bidens.MesBid_scaffold_96348               I 10 I 16
s Microcebus_murinus.CM007691.1                          16515927 6 +  47401472 TTTG-GA
i Microcebus_murinus.CM007691.1                         I 10 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  46974 4 -     48017 TTTG---
i Microgale_talazaci.MicTal_scaffold_34660              I 10 I 1
s Micronycteris_hirsuta.MicHir_scaffold_37978               27107 6 -     32043 CTCA-GA
i Micronycteris_hirsuta.MicHir_scaffold_37978           I 10 C 0
s Microtus_ochrogaster.CM001673.1                        22826266 6 -  98408828 TTTG-GA
i Microtus_ochrogaster.CM001673.1                       I 10 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8215475 6 +  10048721 TTCA-GA
i Miniopterus_natalensis.LDJU01000022.1                 I 10 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            39934 6 +     45743 TTCA-GA
i Miniopterus_schreibersii.MinSch_scaffold_24116        I 10 C 0
s Miopithecus_ogouensis.k141_2935907                         7672 6 +     29742 TTTG-GA
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        19609 6 -    104932 TTCGT-A
i Mirounga_angustirostris.MirAng_flattened_line_8852    I 10 C 0
s Mirza_zaza.k141_593947                                     6621 6 -     12809 TATG-GA
i Mirza_zaza.k141_593947                                I 10 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 152523 6 +    154973 TTCA-GA
i Monodon_monoceros.MonMon_M_scaffold_5598              I 10 I 16
s Mormoops_blainvillei.MorMeg_scaffold_2952                165632 4 +    265003 CTCA---
i Mormoops_blainvillei.MorMeg_scaffold_2952             I 10 I 75
s Moschus_moschiferus.MosMos_scaffold_78805                  9319 6 -     19904 TTCA-GA
i Moschus_moschiferus.MosMos_scaffold_78805             I 10 I 2
s Mungos_mungo.MunMun_flattened_line_8729                  152667 4 -    168139 TTCG---
i Mungos_mungo.MunMun_flattened_line_8729               I 10 C 0
s Murina_feae.MurFea_scaffold_2254                          26459 6 -    100666 TTCA-GA
i Murina_feae.MurFea_scaffold_2254                      I 10 C 0
s Mus_caroli.LT608236.1                                  70773549 6 +  92629107 TTTA-GA
i Mus_caroli.LT608236.1                                 I 10 C 0
s Mus_musculus.chr16                                     75495610 6 +  98207768 TTTA-GA
i Mus_musculus.chr16                                    I 10 C 0
s Mus_pahari.LT608305.1                                  67562336 6 +  89017189 TTTA-GA
i Mus_pahari.LT608305.1                                 I 10 C 0
s Mus_spretus.CM004110.1                                 74338318 6 +  97876770 TTTA-GA
i Mus_spretus.CM004110.1                                I 10 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             16731 6 +     98495 TTTA-GA
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 10 I 226
s Mustela_putorius.JH417978.1                             4430958 3 -  28371801 TTC----
i Mustela_putorius.JH417978.1                           I 10 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     98033 6 -    117718 TTTG-CA
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 11 C 0
s Myotis_brandtii.KE161952.1                               973480 6 +   8389877 TTCA-GA
i Myotis_brandtii.KE161952.1                            I 10 C 0
s Myotis_davidii.KB114863.1                               5024556 6 +   6462685 TTCA-GA
i Myotis_davidii.KB114863.1                             I 10 C 0
s Myotis_lucifugus.GL429887.1                             3470977 6 -   3747815 TTCA-GA
i Myotis_lucifugus.GL429887.1                           I 10 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        16214 6 +     66751 TTCA-GA
i Myotis_myotis.MyoMyo_scaffold_6123                    I 10 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_12795               573 6 -     87886 TTTG-GA
i Myrmecophaga_tridactyla.MyrTri_scaffold_12795         I 9 I 139
s Nannospalax_galili.KL201303.1                            126016 6 +    362372 TTTC-AA
i Nannospalax_galili.KL201303.1                         I 10 C 0
s Nasalis_larvatus.k141_153429                              11933 6 +     48152 TTTG-GA
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4493000 6 -  14209539 TTCGT-A
i Neomonachus_schauinslandi.NINY01007774.1              I 10 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3957114 6 -   4490290 TTCA-GA
i Neophocaena_asiaeorientalis.KZ688543.1                I 10 I 16
s Noctilio_leporinus.NocLep_scaffold_12062                  52941 6 +     94413 CTCA-GA
i Noctilio_leporinus.NocLep_scaffold_12062              I 10 C 0
s Nomascus_annamensis.k141_881190                              40 6 -      2113 TTTG-GA
i Nomascus_annamensis.k141_881190                       C 0 C 0
s Nomascus_concolor.k141_256540                              8341 6 -      8966 TTTG-GA
i Nomascus_concolor.k141_256540                         C 0 C 0
s Nomascus_gabriellae.k141_202556                             103 6 -      1580 TTTG-GA
i Nomascus_gabriellae.k141_202556                       C 0 C 0
s Nomascus_siki_b.tarseq_453                             7594 6 +     12787 TTTG-GA
i Nomascus_siki_b.tarseq_453                        C 0 I 131
s Nomascus_siki_a.k141_421408                                  2196 6 +     16235 TTTG-GA
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                40333 6 +   3668941 tttt-ta
i Nyctereutes_procyonoides.CAJHUB010000786.1            I 10 C 0
s Nycticebus_bengalensis.LG16                            65573513 6 -  95554990 TCTG-GA
i Nycticebus_bengalensis.LG16                           I 7 C 0
s Nycticebus_coucang.k141_6040852                            1149 6 +      1868 TCTG-GA
i Nycticebus_coucang.k141_6040852                       I 7 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65681695 6 +  89412551 TCTG-GA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     I 10 C 0
s Ochotona_princeps.JH802095.1                            5001541 6 -  23139505 TCTG-GG
i Ochotona_princeps.JH802095.1                          I 11 C 0
s Octodon_degus.JH651621.1                                3693176 6 +  10294119 TTTG-GA
i Octodon_degus.JH651621.1                              I 10 C 0
s Odobenus_rosmarus.KB229369.1                             687250 6 -   3126709 TTCGT-A
i Odobenus_rosmarus.KB229369.1                          I 10 C 0
s Odocoileus_virginianus.KZ101650.1                       1086312 6 +   1425656 TTCA-GA
i Odocoileus_virginianus.KZ101650.1                     I 10 I 2
s Okapia_johnstoni.LVCL01S0017931.1                         44381 6 +     78940 TTCA-GA
i Okapia_johnstoni.LVCL01S0017931.1                     I 10 I 2
s Ondatra_zibethicus.OndZib_scaffold_6821                  132072 6 +    145789 TTTG-GA
i Ondatra_zibethicus.OndZib_scaffold_6821               I 10 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  45014 6 +     62360 TTTG-GA
i Onychomys_torridus.OnyTor_scaffold_12578              I 10 C 0
s Orcinus_orca.KB316965.1                                 7230788 6 -   7562323 TTCA-GA
i Orcinus_orca.KB316965.1                               I 10 I 16
s Orycteropus_afer.OryAfe_flattened_line_371885              2006 4 +      3658 TCTG---
i Orycteropus_afer.OryAfe_flattened_line_371885         I 10 I 1
s Oryctolagus_cuniculus.CM000803.1                      141885501 6 + 163896628 TCTG-GA
i Oryctolagus_cuniculus.CM000803.1                      I 10 I 8
s Otocyon_megalotis.JAEUCK010005121.1                      317465 6 -    505867 tttt-ta
i Otocyon_megalotis.JAEUCK010005121.1                   I 10 C 0
s Otolemur_crassicaudatus.k141_505435                        6641 6 -     53940 TCTG-GA
i Otolemur_crassicaudatus.k141_505435                   I 10 C 0
s Otolemur_garnettii.GL873528.1                          18014606 6 -  38779656 TCTG-GA
i Otolemur_garnettii.GL873528.1                         I 10 C 0
s Ovis_aries.CM001582.2                                 134085530 6 - 275406953 TTCA-GA
i Ovis_aries.CM001582.2                                 I 10 I 7
s Ovis_canadensis.OviCan_scaffold_6251                      86776 6 +    140051 TTCA-GA
i Ovis_canadensis.OviCan_scaffold_6251                  I 10 I 2
s Pan_paniscus.CM003386.1                               127580014 6 - 205426864 TTTG-GA
i Pan_paniscus.CM003386.1                               I 5 C 0
s Pan_troglodytes.CM009241.2                            120157175 6 - 196562556 TTTG-GA
i Pan_troglodytes.CM009241.2                            I 5 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  42226 6 +    295523 TTGGT-A
i Panthera_onca.PanOnc_flattened_line_1615              I 10 C 0
s Panthera_pardus.KV860323.1                              3646040 6 +  18214204 TTGGT-A
i Panthera_pardus.KV860323.1                            I 10 C 0
s Panthera_tigris.KE721879.1                              5035677 6 -   6340057 TTGGT-A
i Panthera_tigris.KE721879.1                            I 10 C 0
s Pantholops_hodgsonii.KE114631.1                         1074415 6 -   1292953 TTCA-GA
i Pantholops_hodgsonii.KE114631.1                       I 10 I 2
s Papio_anubis.CM001492.2                               188161914 6 - 188283584 TTTG-GA
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              5004 6 +     25005 TTTG-GA
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47519286 6 +  47705337 TTTG-GA
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 73277 6 -    104429 TTTG-GA
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   11809 6 +     14967 TTTG-GA
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_899489                                   479 6 -     13896 TTTG-GA
i Papio_ursinus.k141_899489                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    123692 6 -    135482 TTCGT-A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 I 10 C 0
s Perodicticus_ibeanus.k141_117958                          12296 6 -     23713 TCTG-GA
i Perodicticus_ibeanus.k141_117958                      I 10 C 0
s Perodicticus_potto.k141_1136815                           13447 6 +     61070 TCTG-GA
i Perodicticus_potto.k141_1136815                       I 10 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       3726 3 +     49596 TTC----
i Perognathus_longimembris.PerPac_flattened_line_19359  I 10 C 0
s Peromyscus_maniculatus.KI615458.1                       2840828 6 -   3366660 TTTG-GA
i Peromyscus_maniculatus.KI615458.1                     I 10 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    19583 6 -     36578 TTTG-GA
i Petromus_typicus.PetTyp_scaffold_33007                I 10 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              5251 6 +      8220 TTCA-GA
i Phocoena_phocoena.PhoPho_flattened_line_53071         I 10 I 16
s Piliocolobus_badius.k141_1987485                           5473 6 -      5908 TTTG-GA
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       6092 6 -     17985 TTTG-GA
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            5459 6 +      7694 TTTG-GA
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26743942 6 +  26888534 TTTG-GA
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306           101710 6 +    112873 TTCA-GA
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        I 10 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990          11756 6 +     21690 TTCA-GA
i Platanista_gangetica.PlaMin_flattened_line_72990      I 10 I 16
s Plecturocebus_bernhardi.k141_959214                       27572 6 +     44506 TTTG-GA
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        27785 6 +     67491 TTTG-GA
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      18024 6 -     98129 TTTG-GA
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     27625 6 +    147771 TTTG-GA
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         4260 6 -     43940 TTTG-GA
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          8343 6 -     55515 TTTG-GA
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         27697 6 +    152463 TTTG-GA
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       5501 6 -    119457 TTTG-GA
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         17419 6 +    134592 TTTG-GA
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          28007 6 -     75465 TTTG-GA
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              192646 6 -    373494 TTTG-GA
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19813295 6 +  19899266 TTTG-GA
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               9215 6 -     15069 TTTG-GA
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              9330 6 +     14865 TTTG-GA
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                6334 4 -      9567 TTTG---
i Procavia_capensis.ProCapCap_scaffold_149274           I 10 I 1
s Prolemur_simus.MPIZ01000048.1                           6854261 6 +  12164890 CTTG-GA
i Prolemur_simus.MPIZ01000048.1                         I 10 C 0
s Propithecus_coquerelli.NW_012147997.1                    673837 6 -   2312742 CTTG-GA
i Propithecus_coquerelli.NW_012147997.1                 I 10 C 0
s Propithecus_coronatus.k141_1353159                         9362 6 +     11805 CTTG-GA
i Propithecus_coronatus.k141_1353159                    I 10 C 0
s Propithecus_diadema.k141_577245                           48697 6 +     52369 CTTG-GA
i Propithecus_diadema.k141_577245                       I 10 C 0
s Propithecus_edwardsi.k141_1317105                         41084 6 -     44753 CTTG-GA
i Propithecus_edwardsi.k141_1317105                     I 10 C 0
s Propithecus_perrieri.k141_7554                            23007 6 +     27322 CTTG-GA
i Propithecus_perrieri.k141_7554                        I 10 C 0
s Propithecus_tattersalli.k141_907138                       22653 6 -     53241 CTTG-GA
i Propithecus_tattersalli.k141_907138                   I 10 C 0
s Propithecus_verreauxi.k141_158021                         44916 6 -     48185 CTTG-GA
i Propithecus_verreauxi.k141_158021                     I 10 C 0
s Psammomys_obesus.NESX01026517.1                           40640 6 +     77221 TTTA-GA
i Psammomys_obesus.NESX01026517.1                       I 10 C 0
s Pteronotus_parnellii.KE867983.1                            8290 6 -     27784 CTCA-GC
i Pteronotus_parnellii.KE867983.1                       I 10 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        252604 3 -    344369 TTC----
i Pteronura_brasiliensis.PteBra_flattened_line_1343     I 10 I 15
s Pteropus_alecto.KB031157.1                             13249259 6 -  17261082 TTCA-GA
i Pteropus_alecto.KB031157.1                            I 10 C 0
s Pteropus_vampyrus.KN525959.1                             607210 6 -   3946241 TTCA-GA
i Pteropus_vampyrus.KN525959.1                          I 10 C 0
s Puma_concolor.QAVW01000427.1                          131542371 4 - 161321710 TTCG---
i Puma_concolor.QAVW01000427.1                          I 10 I 1
s Pygathrix_cinerea.k141_374971                             33321 6 +     56732 TTTG-GA
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6809818 6 +   6970761 TTTG-GA
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             9207 6 +     18040 TTTG-GA
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                23160 6 +     68503 TTCA-GA
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 10 I 2
s Rattus_norvegicus.chr11                                13921031 6 +  90463843 TTTA-GA
i Rattus_norvegicus.chr11                               I 10 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1795091 6 +   2252614 TTCT-GA
i Rhinolophus_sinicus.LVEH01000179.1                    I 10 C 0
s Rhinopithecus_bieti.k119_554384                            3586 6 -     17045 TTTG-GA
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206381073 6 - 206558726 TTTG-GA
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44859976 6 -  45163003 TTTG-GA
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                22603 6 +    109198 TTCA-GA
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            I 10 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                      4043 6 -      4338 TTCA-GA
i Saiga_tatarica.SaiTat_scaffold_371890                 I 10 I 2
s Saimiri_boliviensis.NW_024100938.1                     15678018 5 -  43202129 -TTG-GA
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        9932 5 +     34089 -TTG-GA
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              9871 5 -     60842 -TTG-GA
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              9965 5 +     67014 -TTG-GA
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              9942 5 +     60816 -TTG-GA
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 9879 5 -     76454 -TTG-GA
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17346650 6 -  30362882 TTTG-GA
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         25971 6 -     62485 TTTG-GA
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   41875 6 -    114521 TTCCT-T
i Scalopus_aquaticus.ScaAqu_scaffold_9300               I 10 C 0
s Semnopithecus_entellus.k141_1572367                        6822 6 +     15331 TTTG-GA
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      12197 6 +     20762 TTTG-GA
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         122201 6 +    130994 TTTG-GA
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           40981 6 +     46263 TTTG-GA
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     34126 6 +     42640 TTTG-GA
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        17148 6 +     30600 TTTG-GA
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  107190 6 -    120886 TTTCT-A
i Sigmodon_hispidus.SigHis_scaffold_11332               I 10 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            26530 6 +    739146 TTCA-GA
i Solenodon_paradoxus.SolPar_flattened_line_1012        I 10 C 0
s Sorex_araneus.JH798170.1                               17776861 6 -  27805282 TTCA-GA
i Sorex_araneus.JH798170.1                              I 10 C 0
s Spermophilus_dauricus.KZ294190.1                        2245536 6 +   2842873 TTTG-GA
i Spermophilus_dauricus.KZ294190.1                      I 10 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             241374 3 -    276980 TTT----
i Spilogale_gracilis.SpiGra_flattened_line_905          I 10 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            35568 4 +     62062 TTCA---
i Suricata_suricatta.SurSur_flattened_line_20339        I 10 C 0
s Sus_scrofa.CM000824.4                                 189277553 6 + 218635234 TTCA-GA
i Sus_scrofa.CM000824.4                                 I 10 I 17
s Tadarida_brasiliensis.TadBra_scaffold_61492                4555 6 +     20549 TTCA-GA
i Tadarida_brasiliensis.TadBra_scaffold_61492           I 10 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               18807 6 +     45698 TTTG-GA
i Tamandua_tetradactyla.TamTet_scaffold_26877           I 9 C 0
s Tapirus_indicus.TapInd_scaffold_176                      813163 6 +   1148477 TTAG-AA
i Tapirus_indicus.TapInd_scaffold_176                   I 10 I 17
s Tapirus_terrestris.TapTer_scaffold_14939                  63803 6 +     99546 TTAG-AA
i Tapirus_terrestris.TapTer_scaffold_14939              I 10 I 17
s Theropithecus_gelada.CM009951.1                       194013447 6 - 194193292 TTTG-GA
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             40680 6 -     47444 TTTT-AA
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         I 10 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                  1967 6 -      3104 TTTG-AA
i Tolypeutes_matacus.TolMat_scaffold_475685             I 9 I 17
s Tonatia_saurophila.TonSau_scaffold_3334                  140297 6 -    259118 CTCA-GA
i Tonatia_saurophila.TonSau_scaffold_3334               I 10 C 0
s Trachypithecus_auratus.k141_738098                        30469 6 +     38948 TTTG-GA
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   24029 6 -     32910 TTTG-GA
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      5930 6 -     12939 TTTG-GA
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       5358 6 -     14244 TTTG-GA
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           46751 6 -     54611 TTTG-GA
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        4552 6 -     11566 TTTG-GA
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     6736 6 -     15592 TTTG-GA
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          5388 6 +     14371 TTTG-GA
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   3674 6 +     12481 TTTG-GA
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        3655 6 -     24393 TTTG-GA
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       8799 6 -     28054 TTTG-GA
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44663583 6 -  44834318 TTTG-GA
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       5895 6 +     13828 TTTG-GA
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                  11638 6 +     90398 TTCA-GA
i Tragulus_javanicus.TraJav_scaffold_14717              I 10 C 0
s Trichechus_manatus.JH594618.1                          16091870 4 +  31416278 TTCG---
i Trichechus_manatus.JH594618.1                         I 10 I 1
s Tupaia_chinensis.KB320831.1                             2802579 6 -   3938065 AGTG-GA
i Tupaia_chinensis.KB320831.1                           I 10 I 18
s Tupaia_tana.TupTan_flattened_line_68454                   11403 6 +     13056 CGTG-GA
i Tupaia_tana.TupTan_flattened_line_68454               I 10 I 18
s Tursiops_truncatus.MRVK01000923.1                      69319518 6 -  96451834 TTCA-GA
i Tursiops_truncatus.MRVK01000923.1                     I 10 I 16
s Uropsilus_gracilis.UroGra_scaffold_4115                    2230 6 +    136657 TTCCT-A
i Uropsilus_gracilis.UroGra_scaffold_4115               I 10 C 0
s Ursus_maritimus.KK498671.1                              6523020 6 +  28682327 TTTGT-A
i Ursus_maritimus.KK498671.1                            I 10 I 16
s Varecia_rubra.k141_432109                                 10928 6 -     20643 CTTG-GA
i Varecia_rubra.k141_432109                             I 10 C 0
s Varecia_variegata.k141_775891                             30463 6 -     33872 CTTG-GA
i Varecia_variegata.k141_775891                         I 10 C 0
s Vicugna_pacos.KN269600.1                                1530554 6 -   2331223 ttta-aa
i Vicugna_pacos.KN269600.1                              I 10 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                146692 6 -    281493 TTTTT-A
i Vulpes_lagopus.VulLag_flattened_line_2045             I 10 C 0
s Xerus_inauris.XerIna_scaffold_7898                       133032 6 -    134049 TTTG-GA
i Xerus_inauris.XerIna_scaffold_7898                    I 10 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        222111 6 -    227762 TTCGT-A
i Zalophus_californianus.ZalCal_flattened_line_4097     I 10 C 0
s Zapus_hudsonius.ZapHud_scaffold_202118                     2631 6 -      3360 TTTG-GA
i Zapus_hudsonius.ZapHud_scaffold_202118                I 10 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            4111 6 -     13665 TTCA-GA
i Ziphius_cavirostris.ZipCav_flattened_line_60625       I 10 I 16
e Bubalus_bubalis.KI419065.1                               677465 4 +   1914593 I
e Hylobates_pileatus_a.tarseq_592                             37267 2881 -     60944 I
e Tarsius_wallacei.k141_48636                               64696 0 +     65473 C
e Tarsius_lariang.k141_609102                               31387 0 +     42269 C
e Pithecia_vanzolinii.k141_831006                           15424 0 -     31692 C
e Pithecia_pithecia.tarseq_313                           13476514 0 -  19735023 C
e Pithecia_pissinattii.k141_1102319                          7521 0 +      9673 C
e Pithecia_mittermeieri.k141_2119203                        14292 0 -     16101 C
e Pithecia_hirsuta.k141_1152968                             11093 0 -     15800 C
e Pithecia_chrysocephala.k141_159118                        27038 0 +     78826 C
e Pithecia_albicans.k141_991845                             45662 0 -     61926 C
e Cephalopachus_bancanus.k141_702587                        12545 0 +     21754 C
e Carlito_syrichta.NW_007248099.1                          313530 0 +    345090 C
e Symphalangus_syndactylus.tarseq_24                        20205 0 -  13920577 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               19034 135 +    209709 aGTGTCA---A-A---ATTAT-C---T--------CA-TT--AATGAT--CAGAT-AGGCTTT-TGGCTCATT---GTA---ATGAGATGTTCCTATAAACCTAATTTG-AAA-----------G---A----CAA--AGAC----AGA----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GT---a-a----aa--TCA------------GTAGCTCTA----TTT-A
s Acinonyx_jubatus.LLWD01000356.1                         2041890 133 +   3721120 AGTGTTA---A-A---TTTATTC---T--------CA-TT--AATTAT--CAAAT-AGGCCCT-TGGCTTATT---ATA---ATGAGATGTTCCTATGATCCAAAGTTG-AAC-----------A---A----TAT--AGAC----AGA----T-T--T-AA---GAAT-------CT-TCA-----------ATTCTT------T-GG---A-A----AA--T---------------CAGGCATA----ATA-A
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    119543 135 -    189883 AGTGTGA---A-T---GTGAC-C---T--------CA-TT--AATGAT--CAAAT-AGGCCTT-TGACTCTTT---ATA---ATGGGATGTTTCTGTGAACGAAAATTG-AAA-----------G---A----GAA--AGAC----AGA----T-T--T-AG---GGAC-------CT-TCA-----------GTACTT------A-GA---A-A----AA--TAA------------GCAATTCTA----ATT-A
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10665775 112 +  23371972 ---------------------------------------t--aattat--CAAAT-AGGCCTT-TGGTTCATT---ATA---ATGAGATGTTCCTATGATCCAAAGTTG-AAT-----------G---A----TAT--AGAC----AGA----C-T--T-GG---GAAT-------CT-T-A-----------ATCCTT------T-GG---A-A----AA--T---------------CAATTCTG----ATA-A
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 16 C 0
s Ailurus_fulgens.LNAC01000003.1                          7102708 131 -  16596857 -GTGTTA---A-A---ATTATTC---T--------CA-CT--AATTAT--CAAAT-AGGCCCT-TGGTTCATT---ACA---ATGAGATGTTCCTATGATCCAAAGTTG-AAT-----------G---A----TAT--AGAC----GGA----C-T--T-GG---GAAT-------CT-T-A-----------ATCTTT------T-GG---A-A----AA--T---------------CAGTTCTA----ATA-A
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_67806                    6728 137 +     22864 AGCGTTA---A-A---ATGAC-C---A--------CA-TT--AACGAT--CAAAT-GGGCCTT-TGAGTCATT---GTA---AGGAGATATTTCTATGAACCAAAATTG-AAA-----------G---A----TAA--AAAC----AGA----TGT--T-AG---GGAT-------CT-TCA-----------ATACTT------GGGG---G-A----AA--ACA------------GCAGACCTA----ATT-A
i Allactaga_bullata.AllBul_scaffold_67806               I 16 I 73
s Allenopithecus_nigroviridis.k141_2469532                   6931 135 -     60446 AGTATCA---A-A---ATTAC-C---T--------CA-TT--AATGAT--CAAAT-AAGCTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-GAA-----------G---A----TAA--AGAC----AGA----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         7645 135 -     29318 AGTGTCA---A-A---ATTAC-C---T--------CA-TT--AATGAT--CAAAT-AAGCTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-GAA-----------G---A----CAA--AGAC----AGA----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         6583 135 +     38766 AGTGTCA---A-A---ATTAC-C---T--------CA-TT--AATGAT--CAAAT-AAGCTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-GAA-----------G---A----CAA--AGAC----AGA----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          7541 135 -     80423 AGTGTCA---A-A---ATTAC-C---T--------CA-TT--AATGAT--CAAAT-AAGCTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-GAA-----------G---A----CAA--AGAC----AGA----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              2484 135 +     19852 AGTGCTA---A-A---ATTAC-C---T--------CA-TT--AATGAT--CAAAT-AGGATTT-TGGCTCTTT---GTA---ATGACATGTTCCTATAAACCAAATCTG-AAA-----------G---A----TGA--AGAC----AGA----T-T--T-TG---GGAT-------CT-TTA-----------ATTCTT------G-GA---C-A----AA--TCA------------GTAATTCTA----TTT-A
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                4700 135 -     12443 AGTGCTA---A-A---ATTAC-C---T--------CA-TT--AATGAT--CAAAT-AGGATTT-TGGCTCTTT---GTA---ATGACATGTTCCTATAAACCAAATCTG-AAA-----------G---A----TGA--AGAC----AGA----T-T--T-TG---GGAT-------CT-TTA-----------ATTCTT------G-GA---C-A----AA--TCA------------GTAATTCTA----TTT-A
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                             2027 135 +      5070 AGTGCTA---A-A---ATTAC-C---T--------CA-TT--AATGAT--CAAAT-AGGATTT-TGGCTCTTT---GTA---ATGACATGTTCCTATAAACCAAATCTG-AAA-----------G---A----TGA--AGAC----AGA----T-T--T-TG---GGAT-------CT-TTA-----------ATTCTT------G-GA---C-A----AA--TCA------------GTAATTCTA----TTT-A
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_macconnelli.k141_2318944                          4509 135 -     24210 AGTGCTA---A-A---ATTAC-C---T--------CA-TT--AATGAT--CAAAT-AGGATTT-TGGCTCTTT---GTA---ATGACATGTTCCTATAAACCAAATCTG-AAA-----------G---A----TGA--AGAC----AGA----T-T--T-TG---GGAT-------CT-TTA-----------ATTCTT------G-GA---C-A----AA--TCA------------GTAATTCTA----TTT-A
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_494922                             1013 135 -      8325 AGTGCTA---A-A---ATTAC-C---T--------CA-TT--AATGAT--CAAAT-AGGATTT-TGGCTCTTT---GTA---ATGACATGTTCCTATAAACCAAATCTG-AAA-----------G---A----TGA--AGAC----AGA----T-T--T-TG---GGAT-------CT-TTA-----------ATTCTT------G-GA---C-A----AA--TCA------------GTAATTCTA----TTT-A
i Alouatta_nigerrima.k141_494922                        C 0 C 0
s Alouatta_palliata.k141_405616                              6908 135 +     16794 AGTGCTA---A-A---ATTAC-C---T--------CA-TT--AATGAT--CAAAT-AGGATTT-TGGCTCTTT---GTA---ATGACATGTTCCTATAAACCAAATCTG-AAA-----------G---A----TGA--AGAC----AGA----T-T--T-TG---GGAT-------CT-TTA-----------ATTCTT------G-GA---C-A----AA--TCA------------GTAATTCTA----TTT-A
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_347198                              960 135 +      9111 AGTGCTA---A-A---ATTAC-C---T--------CA-TT--AATGAT--CAAAT-AGGATTT-TGGCTCTTT---GTA---ATGAGATATTCCTATAAACCAAATCTG-AAA-----------G---A----TGA--AGAC----AGA----T-T--T-GG---GGAT-------CT-TTA-----------ATTCTT------G-GA---C-A----AA--TCA------------GTAATTCTA----TTT-A
i Alouatta_puruensis.k141_347198                        C 0 C 0
s Alouatta_seniculus.k141_790278                             6208 135 -      9835 AGTGCTA---A-A---ATTAC-C---T--------CA-TT--AATGAT--CAAAT-AGGATTT-TGGCTCTTT---GTA---ATGAGATGTTCCTATAAACCAAATCTG-AAA-----------G---A----TGA--AGAC----AGA----T-T--T-TG---GGAT-------CT-TTA-----------ATTCTT------G-GA---C-A----AA--TCA------------GTAATTCTA----TTT-A
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3528936 120 +   4113121 ------------C---ATTAGTATTAT--------CA-T------TAT--CCAGC-AGGCCCT-TAGCTCATT---ATA---AT-----GTTCCTATAAtccaaaattg-aaa-----------g---a----aaa--caac----aga----c-c--T-AG----GAT-------CT-CCA-----------ATCCTT------G-G----A-A----AA--TCA------------GCAGTTTTA----ATT-A
i Ammotragus_lervia.NIVO01013474.1                      I 2 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      394885  70 -    631301 AGTGTTA---A-A-------TTA---T--------TA-TT--AATTAG--AAAAT-AGGCCT--TGGCTCATT---A------TAA--CATGAGTATGATCCAATGTTG-AA------------------------------------------------------------------------------------------------------------------------------------------------
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 I 73
s Antilocapra_americana.AntAmePen_scaffold_27338             6166 120 +     55446 ------------C---ATTAATATTAT--------CA-T------TAT--CCAGC-AGGCCCT-TAGCTCATT---ATA---AT-----GTTCCTATAATCCAAAATTG-AAA-----------G---A----AAA--CAAC----AGA----C-C--T-AA----GAT-------CT-CCA-----------ATCCTT------G-G----A-A----AA--TCA------------GCAGTTCTA----ATT-A
i Antilocapra_americana.AntAmePen_scaffold_27338        I 2 C 0
s Aotus_azarae.k141_3170768                                 67815 136 +     78111 AGTGCTA---A-A---ATTAC-C---T--------CA-TT--AATGAT--CAAAT-AGGATTT-TGGCTCTTT---GTA---ATGAGATGTTCCTACAAACCAAAGTTG-AAA-----------G---A----TGA--AGAC----AGA----T-T--T-TG-A-GGAT-------CT-TTA-----------GTTCTT------A-GA---A-A----AA--TCA------------GTAGTTCTA----TTT-A
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                           10756 136 +     22701 AGTGCTA---A-A---ATTAC-C---T--------CA-TT--AATGAT--CAAAT-AGGATTT-TGGCTCTTT---GTA---ATGAGATGTTCCTACAAACCAAAGTTG-AAA-----------G---A----TGA--AGAC----AGA----T-T--T-TG-A-GGAT-------CT-TTA-----------GTTCTT------A-GA---A-A----AA--TCA------------GTAGTTCTA----TTT-A
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5754725 136 +   9889416 AGTGCTA---A-A---ATTAC-C---T--------CA-TT--AATGAT--CAAAT-AGGATTT-TGGCTCTTT---GTA---ATGAGATGTTCCTACAAACCAAAGTTG-AAA-----------G---A----TGA--AGAC----AGA----T-T--T-TG-A-GAAT-------CT-TTA-----------GTTCTT------A-GA---A-A----AA--TCA------------GTAGTTCTA----TTT-A
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                            11304 136 -    104377 AGTGCTA---A-A---ATTAC-C---T--------CA-TT--AATGAT--CAAAT-AGGATTT-TGGCTCTTT---GTA---ATGAGATGTTCCTACAAACCAAAGTTG-AAA-----------G---A----TGA--AGAC----AGA----T-T--T-TG-A-GGAT-------CT-TTA-----------GTTCTT------A-GA---A-A----AA--TCA------------GTAGTTCTA----TTT-A
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                              11333 136 +     23246 AGTGCTA---A-A---ATTAC-C---T--------CA-TT--AATGAT--CAAAT-AGGATTT-TGGCTCTTT---GTA---ATGAGATGTTCCTACAAACCAAAGTTG-AAA-----------G---A----TGA--AGAC----AGA----T-T--T-TG-A-GGAT-------CT-TTA-----------GTTCTT------A-GA---A-A----AA--TCA------------GTAGTTCTA----TTT-A
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     3954 135 +     11424 ATTGTTA---A-A---ATGAC-C---C--------CA-TT--AATGAT--CAAAC-AGGCCTT-TGACTCATC---ATA---ATGAGATGTTCCTATGAATGAAATTTG-AAA-----------G---A----TAA--AGAC----AGA----T-T--T-AG---GGAT-------CT-TCA-----------ATTTTT------G-TT---A-A----AA--TCA------------GCAGTTCTA----ATT-A
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        7913 135 +      9265 AGTGTTA---A-T---ATTAG-C---T--------CA-TT--AATGAT--CAAAT-ACGCCTT-TGGCTCATT---ATA---ATGAGATGTTTCTACATACCAAAATTG-AAA-----------G---A----TAA--AGAT----AGA----T-T--T-AG---GGAT-------CT-TCA-----------ATCCTT------G-GA---A-A----AA--TCA------------GTGGTCCTA----ATT-A
i Arctocebus_calabarensis.k141_587554                   C 0 I 12
s Artibeus_jamaicensis.ArtJam_scaffold_41619                13180  76 -     29036 -GTGTTA---A-A---ACTGTTA---T--------CA-TT--GATTAG--AAAGT-AGGCCTT-TGGTTCATT---A------TACAACATTCCTATGATCCAATGTTG-AA------------------------------------------------------------------------------------------------------------------------------------------------
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 I 51
s Ateles_geoffroyi_b.tarseq_2582                             9544618 135 +  39197703 AGTGCTA---A-A---ATTAC-C---T--------CA-TT--AATGAT--CAAAT-AGGATTT-TGGCTCTTT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-AAA-----------G---A----TGA--GGAC----AGA----T-T--T-TG---GGAT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAATTCTA----TTT-A
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             65892 135 +     85812 AGTGCTA---A-A---ATTAC-C---T--------CA-TT--AATGAT--CAAAT-AGGATTT-TGGCTCTTT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-AAA-----------G---A----TGA--GGAC----AGA----T-T--T-TG---GGAT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAATTCTA----TTT-A
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                16902 135 +     89302 AGTGCTA---A-A---ATTAC-C---T--------CA-TT--AATGAT--CAAAT-AGGATTT-TGGCTCTTT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-AAA-----------G---A----TGA--GGAC----AGA----T-T--T-TG---GGAT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAATTCTA----TTT-A
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             21406 135 -     58268 AGTGCTA---A-A---ATTAC-C---T--------CA-TT--AATGAT--CAAAT-AGGATTT-TGGCTCTTT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-AAA-----------G---A----TGA--GGAC----AGA----T-T--T-TG---GGAT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAATTCTA----TTT-A
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             69400 135 +    119057 AGTGCTA---A-A---ATTAC-C---T--------CA-TT--AATGAT--CAAAT-AGGATTT-TGGCTCTTT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-AAA-----------G---A----TGA--GGAC----AGA----T-T--T-TG---GGAT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAATTCTA----TTT-A
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              11369 135 -     25888 AGTGCTA---A-A---ATTAC-C---T--------CA-TT--AATGAT--CAAAT-AGGATTT-TGGCTCTTT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-AAA-----------G---A----TGA--GGAC----AGA----T-T--T-TG---GGAT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAATTCTA----TTT-A
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                12461 136 -     16375 AGTGTTA---A-A---ATTAG-C---T--------CG-TT--AATGAT--CAAAT-AGACCTT-TGGCTCATT---ATA---ATGAGATGTTCCTATAAACCAAAGTTG-AAA-----------G---A----TAA--AGAT----AGA----T-T--T-AG---GAAT-------CT-TTG-----------ATCTTT------G-GA---A-A----AA-CATA------------GCAGTCCTA----ATT-A
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               6077 136 +      6337 AGTGTTA---A-A---ATTAG-C---T--------CG-TT--AATGAT--CAAAT-AGACCTT-TGGCTCATT---ATA---ATGAGATGTTCCTATAAACCAAAGTTG-AAA-----------G---A----TAA--AGAT----AGA----T-T--T-AG---GAAT-------CT-TTG-----------ATCTTT------G-GA---A-A----AA-CATA------------GCAGTCCTA----ATT-A
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26386368  63 +  51448160 --------------------------------------TT--AATTAT--CAAAT-AGGCCCT-TGGCTCATT---ATA---ATGAGATGTTCCTATGATCCAAAGTTG-AAA-----------C-----------------------------------------------------------------------------------------------------------------------------------
i Balaenoptera_acutorostrata.KI537095.1                 I 16 I 54
s Balaenoptera_bonaerensis.DF502048.1                       11541  94 -     13118 --------------------------------------TT--AATTAT--CAAAT-AGGCCCT-TGGCTCATT---ATA---ATGAGATGTTCCTATAATCCAAAGTTG-AAA-----------C---A----TAA--AGAC----AGA----T-C--T-AG----GAT-------CT-TCA-----------ATCTTT------G--------------------------------------------------
i Balaenoptera_bonaerensis.DF502048.1                   I 16 I 24
s Beatragus_hunteri.BeaHun_scaffold_21644                   51136 120 -     72089 ------------C---ATTAATATTAT--------CA-T------TAT--CCAGC-AGGCCCT-TAGCTCATT---ATA---AT-----GTTCCTATAATCCAAAATTG-AAA-----------G---A----AAA--CAAC----AGA----C-C--T-AG----GAT-------CT-CCA-----------ATCCTT------G-G----A-A----AA--TCA------------GCAGTTTTA----ATT-A
i Beatragus_hunteri.BeaHun_scaffold_21644               I 2 C 0
s Bison_bison.KN264915.1                                   305861 120 -   6870073 ------------c---attaatattat--------ca-t------tat--cCAGC-AGGCCCT-TAGCTCATT---ATA---AT-----GTTCCTATAAtccaaaattg-aaa-----------g---a----aaa--caac----aga----c-C--T-AG----GAT-------CT-CCA-----------ATCCTT------G-G----A-A----AA--TCA------------GCAGTTCTA----ATT-A
i Bison_bison.KN264915.1                                I 2 C 0
s Bos_indicus.CM003021.1                                 22959967 120 + 161108492 ------------C---ATTAATATTAT--------CA-T------TAT--CCAGC-AGGCCCT-TAGCTCATT---ATA---AT-----GTTCCTATAAtccaaaattg-aaa-----------g---a----aaa--caac----aga----c-C--T-AG----GAT-------CT-CCA-----------ATCCTT------G-G----A-A----AA--TCA------------GCAGTTCTA----ATT-A
i Bos_indicus.CM003021.1                                I 2 C 0
s Bos_mutus.JH883513.1                                     422146 120 +    998990 ------------c---attaatattat--------ca-t------tat--ccAGC-AGGCCCT-TAGCTCATT---ATA---AT-----GTTCCTATAAtccaaaattg-aaa-----------g---a----aaa--caac----aga----c-c--T-AG----GAT-------CT-CCA-----------ATCCTT------G-G----A-A----AA--TCA------------GCAGTTCTA----ATT-A
i Bos_mutus.JH883513.1                                  I 2 C 0
s Bos_taurus.CM000177.6                                  22668619 120 + 158972876 ------------c---attaatattat--------ca-t------tat--ccAGC-AGGCCCT-TAGCTCATT---ATA---AT-----GTTCCTATAAtccaaaattg-aaa-----------g---a----aaa--caac----aga----c-C--T-AG----GAT-------CT-CCA-----------ATCCTT------G-G----A-A----AA--TCA------------GCAGTTCTA----ATT-A
i Bos_taurus.CM000177.6                                 I 2 C 0
s Bubalus_bubalis.KI419065.1                               677469 120 +   1914593 ------------C---ATTAATATTAT--------CA-T------TAT--CCAGC-AGGCCCT-TAGCTCATT---ATA---AT-----GTTCCTATAATccaaaattg-aaa-----------g---a----aaa--caac----aga----c-C--T-AG----GAT-------CT-CCA-----------ATCCTT------G-G----A-A----AA--TCA------------GCAGTTCTA----ATT-A
i Bubalus_bubalis.KI419065.1                            I 4 C 0
s Cacajao_ayresi.k141_724503                               119232 135 -    171031 AGTGCTA---A-A---ATTAC-C---T--------CA-TT--AATGAT--CAAAT-AGGATTT-TGGCTCTTT---GCA---ATGAGATGTTCCTATAAACCAAAGTTG-AAA-----------G---A----TGA--AGAC----AGA----T-T--T-GG---GGAT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 18252 135 +    125063 AGTGCTA---A-A---ATTAC-C---T--------CA-TT--AATGAT--CAAAT-AGGATTT-TGGCTCTTT---GCA---ATGAGATGTTCCTATAAACCAAAGTTG-AAA-----------G---A----TGA--AGAC----AGA----T-T--T-GG---GGAT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                20299 135 -    216513 AGTGCTA---A-A---ATTAC-C---T--------CA-TT--AATGAT--CAAAT-AGGATTT-TGGCTCTTT---GCA---ATGAGATGTTCCTATAAACCAAAGTTG-AAA-----------G---A----TGA--AGAC----AGA----T-T--T-GG---GGAT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       12842 135 -    134917 AGTGCTA---A-A---ATTAC-C---T--------CA-TT--AATGAT--CAAAT-AGGATTT-TGGCTCTTT---GCA---ATGAGATGTTCCTATAAACCAAAGTTG-AAA-----------G---A----TGA--AGAC----AGA----T-T--T-GG---GGAT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3225452 116 -   8989139 agcatga---a-a---atgaTTA---T--------CA-TT--AATTAT--CAAAT-AGGCCCT-TGGCTCATT---ATA---ATGGGATGTTCCTATGATCCAAAGTTG-AAA-----------G---A----TAA--AGAC----AGA----T-C--T-AG----GAT-------CT-TCA-----------ATCCCT------G-GA---A-------------------------------------------
i Camelus_bactrianus.KN276303.1                         C 0 I 18
s Camelus_dromedarius.KN271192.1                           403152 116 -  15254737 agcatga---a-a---atgaTTA---T--------CA-TT--AATTAT--CAAAT-AGGTCCT-TGGCTCATT---ATA---ATGGGATGTTCCTATGATCCAAAGTTG-AAA-----------G---A----TAA--AGAC----AGA----T-C--T-AG----GAT-------CT-TCA-----------ATCCCT------G-GA---A-------------------------------------------
i Camelus_dromedarius.KN271192.1                        C 0 I 18
s Camelus_ferus.KB016973.1                                2978890 116 +   6889770 agcatga---a-a---atgaTTA---T--------CA-TT--AATTAT--CAAAT-AGGCCCT-TGGCTCATT---ATA---ATGGGATGTTCCTATGATCCAAAGTTG-AAA-----------G---A----TAA--AGAC----AGA----T-C--T-AG----GAT-------CT-TCA-----------ATCCCT------G-GA---A-------------------------------------------
i Camelus_ferus.KB016973.1                              C 0 I 18
s CanFam4.chr31                                          11528613  92 +  39901454 AGTGTTA---A-A---ATTATTC---T--------TA-TT--AATTAT--CAAAT-AGGCCCT-TGGCTCATT---TTA---ACGAAATGTTCCTATGATCCAAAGCTG-AAT-----------G---A----TAC--AGAC----AG------------------------------------------------------------------------------------------------------------
i CanFam4.chr31                                         C 0 I 38
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   23587  92 +     87036 AGTGTTA---A-A---ATTATTC---T--------TA-TT--AATTAT--CAAAT-AGGCCCT-TGGCTCATT---TTA---ACGAAATGTTCCTATGATCCAAAGCTG-AAT-----------G---A----TAC--AGAC----AG------------------------------------------------------------------------------------------------------------
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 I 38
s Canis_lupus_dingo.QKWQ01001993.1                       11275510  92 -  35597290 agtgtta---a-a---attattc---t--------ta-tt--aattaT--CAAAT-AGGCCCT-TGGCTCATT---TTA---ACGAAATGTTCCTATGATCCAAAGCTG-AAT-----------G---A----TAC--AGAC----AG------------------------------------------------------------------------------------------------------------
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 I 38
s Canis_lupus_familiaris.chr31                           11098008  92 +  39895921 agtgtta---a-a---attattc---t--------ta-tt--aattaT--CAAAT-AGGCCCT-TGGCTCATT---TTA---ACGAAATGTTCCTATGATCCAAAGCTG-AAT-----------G---A----TAC--AGAC----AG------------------------------------------------------------------------------------------------------------
i Canis_lupus_familiaris.chr31                          C 0 I 38
s Canis_lupus_orion.HG994411.1                           16464792  92 -  44759192 agtgtta---a-a---attattc---t--------ta-tt--aattAT--CAAAT-AGGCCCT-TGGCTCATT---TTA---ACGAAATGTTCCTATGATCCAAAGCTG-AAT-----------G---A----TAC--AGAC----AG------------------------------------------------------------------------------------------------------------
i Canis_lupus_orion.HG994411.1                          C 0 I 38
s Capra_aegagrus.CM003214.1                              21336370 120 + 157394656 ------------C---ATTAATATTAT--------CA-T------TAT--CCAGC-AGGCCCT-TAGCTCATT---ATA---AT-----GTTCCTATAATccaaaattg-aaa-----------g---a----aaa--caac----aga----c-c--T-AG----GAT-------CT-CCA-----------ATCCTT------G-G----A-A----AA--TCA------------GTAGTTTTA----ATT-A
i Capra_aegagrus.CM003214.1                             I 2 C 0
s Capra_hircus.CM004562.1                               135714723 120 - 157403528 ------------C---ATTAATATTAT--------CA-T------TAT--CCAGC-AGGCCCT-TAGCTCATT---ATA---AT-----GTTCCTATAATccaaaattg-aaa-----------g---a----aaa--caac----aga----c-c--T-AG----GAT-------CT-CCA-----------ATCCTT------G-G----A-A----AA--TCA------------GTAGTTTTA----ATT-A
i Capra_hircus.CM004562.1                               I 2 C 0
s Carlito_syrichta.NW_007248099.1                          313530  82 +    345090 -------------------------------------------------------------------------------------------------------aagtta-aaaaggacactgaag---a----aaa--ctac----aaa----t-g--gata---aaag-------tt-tca-----------atccattagcaag-aa---a-t----at--cca------------tcattaATA----TAT-A
i Carlito_syrichta.NW_007248099.1                       C 0 I 1324
s Carollia_perspicillata.CarPer_scaffold_4436               64166  77 +     67245 AGTGTTA---A-A---ATTGTTA---T--------CA-TT--AATTAG--AAAAT-AGGCCTT-TGGCTCATT---A------TAAGATATTCCTATGATCCAATGTTG-AA------------------------------------------------------------------------------------------------------------------------------------------------
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 I 50
s Castor_canadensis.CasCan_scaffold_1326                     1459 133 -    202837 AGTGTTA---A-A---ATGAC-C---T--------TC-T-----TGAT--CAAAT-AAGCCTT-TGACTCATT---ATA---ATGAGATCTTTCTATGAACCAAAGTAA-AGA-----------G---A----TAA--AGAC----AGA----T-T--T-AG---GAAT-------CT-TCA-----------GTCTTT------G-AA---AAA----CA--TCA------------GCAGTTCTA----ATT-A
i Castor_canadensis.CasCan_scaffold_1326                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   165187 115 -    276539 ------------------------------------------AATTAT--CAAAC-AGCCTCT-TGACTCATT---ATA---CTGAGATGCCCTTATGATTCAGGGTTG-AAA-----------G---A----TAA--AGAT----GGA----T-C--A-AG---GTAT-------CT-TCA-----------ATCTTT------G-GA---A-A----AA--TCA------------GTAGTTTTA----ATT-A
i Catagonus_wagneri.CatWag_scaffold_1305                I 15 C 0
s Cavia_aperea.AVPZ01000278.1                            15791703 127 -  24422027 AGTTTTA---A-A---ATGAC-C---T--------CA-TT--AATGAT--CAaac-aagtctt-tgattcatt---aaa---atgagatgtttctatgaaatgaatttg-aaa-----------a---c----taa--agat----aga----t-t--t-gT---GAAT-------AT-TTG-----------ATTCTG------G-GA---A-A----AA--TTG------------ACAGT-------------
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15803648 127 -  24440124 AGTTTTA---A-A---ATGAC-C---T--------CA-TT--AATGAT--CAaac-aagtctt-tgattcatt---aaa---atgagatgtttctatgaaatgaatttg-aaa-----------a---c----taa--agat----aga----t-t--t-gT---GAAT-------AT-TTG-----------ATTCTG------G-GA---A-A----AA--TTG------------ACAGT-------------
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       181820 127 +    436027 AGTTTTA---A-A---ATGAC-C---T--------CA-TT--AATGAT--CAAAC-AAGTCTT-TGATTCATT---AAA---ATGAGATGTTTCTATGAAATGAATTTG-AAA-----------A---C----TAA--AGAT----AGA----T-T--T-GT---GAAT-------AT-TTG-----------ATTCTG------G-GA---A-A----AA--TTG------------ACAGT-------------
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18896968 135 -  29618158 AGTGCTA---A-A---ATTAA-C---T--------CA-TT--AATGAT--CAAAT-AGGATTT-TGGCTCTTT---GTA---ATGAGATGTCCCTTTAAACCAAAGTTG-AAA-----------G---A----TGA--AGAC----AGA----T-T--T-TG---GGAT-------CT-TTA-----------ATTCTT------A-AA---A-A----AA--TCA------------GTAGTTCTA----TTT-A
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                13618 135 -     26817 AGTGCTA---A-A---ATTAA-C---T--------CA-TT--AATGAT--CAAAT-AGGATTT-TGGCTCTTT---GTA---ATGAGATGTTCCTTTAAACCAAAGTTG-AAA-----------G---A----TGA--AGAC----AGA----T-T--T-TG---GGAT-------CT-TTA-----------ATTCTT------A-AA---A-A----AA--TCA------------GTAGTTCTA----TTT-A
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                17861 135 +     25043 AGTGCTA---A-A---ATTAA-C---T--------CA-TT--AATGAT--CAAAT-AGGATTT-TGGCTCTTT---GTA---ATGAGATGTTCCTTTAAACCAAAGTTG-AAA-----------G---A----TGA--AGAC----AGA----T-T--T-TG---GGAT-------CT-TTA-----------ATTCTT------A-AA---A-A----AA--TCA------------GTAGTTCTA----TTT-A
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                        12545  82 +     21754 -------------------------------------------------------------------------------------------------------aagtta-aaaaggacactgaag---a----aaa--ctac----aaa----t-t--gata---aaag-------tt-tca-----------atccattagcaag-aa---a-t----at--cca------------tcattaata----tat-a
i Cephalopachus_bancanus.k141_702587                    C 0 I 1346
s Ceratotherium_simum.JH767818.1                          4370454 115 +   7569818 ------------------------------------------aattat--caaat-AGGCCCT-AGGCTCATT---ATA---ATGAGCTATTCCTGTGATCCAAAGTTG-AAA-----------G---A----TAT--AGAC----AGA----T-G--T-AG---AGAT-------TT-TCA-----------ATCCTT------T-GG---A-A----AA--TCA------------GCAGTTCTA----ATT-A
i Ceratotherium_simum.JH767818.1                        I 17 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_171732          611 115 +      8380 ------------------------------------------AATTAT--CAAAT-AGGCCCT-AGGCTCATT---ATA---ATGAGCTATTCCTGTGATCCAAAGTTG-AAA-----------G---A----TAT--AGAC----AGA----T-G--T-AG---AGAT-------TT-TCA-----------ATCCTT------T-GG---A-A----AA--TCA------------GCAGTTCTA----ATT-A
i Ceratotherium_simum_cottoni.CerCot_scaffold_171732    I 17 C 0
s Cercocebus_atys.KQ010443.1                              6560870 135 +   6739814 AGTGTCA---A-A---ATTAC-C---T--------CA-TT--ACTGAT--CAAAT-AAGCTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-GAA-----------G---A----CAA--AGAC----AGA----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      32347 135 +     60454 AGTGTCA---A-A---ATTAC-C---T--------CA-TT--ACTGAT--CAAAT-AAGCTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-GAA-----------G---A----CAA--AGAC----AGA----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          7551 135 -     21101 AGTGTCA---A-A---ATTAC-C---T--------CA-TT--ACTGAT--CAAAT-AAGCTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-GAA-----------G---A----CAA--AGAC----AGA----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         64861 135 -    107033 AGTGTCA---A-A---ATTAC-C---T--------CA-TT--ACTGAT--CAAAT-AAGGTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-GAA-----------G---A----CAA--AGAC----AGA----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        7722 135 -     17608 AGTGTCA---A-A---ATTAC-C---T--------TA-TT--AATGAT--CAAAT-AAGCTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-GAA-----------G---A----CAA--AGAC----AGA----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          4890 135 +     45019 AGTGTCA---A-A---ATTAC-C---T--------CA-TT--AATGAT--CAAAT-AAGCTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-GAA-----------G---A----CAA--AGAC----AGA----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           5166 122 +     15177 AGTGTCA---A-A---ATTAC-C---T--------CA-TT--AATGAT--CAAAT-AAGCTTT-TGGTTCACT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-GAA-----------G---A----CAA--AGAC----AGA----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------------------------
i Cercopithecus_diana.k141_2561715                      C 0 I 5
s Cercopithecus_hamlyni.k141_129805                          7772 135 +     16677 AGTGTCA---A-A---ATTAC-C---T--------CA-TT--AATGAT--CAAAT-AAACTTT-TGGTTCACT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-GAA-----------G---A----CAA--AGAC----AGA----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           29968 122 +     35983 AGTGTCA---A-A---ATTAC-C---T--------CA-TT--AATGAT--CAAAT-AAGCTTT-TGGTTCACT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-GAA-----------G---A----CAA--AGAC----AGA----G-T--T-TG---GAAT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------------------------
i Cercopithecus_lowei.k141_623764                       C 0 I 5
s Cercopithecus_albogularis.ctg51                              11996493 135 +  12117833 AGTGTCA---A-A---ATTAC-C---T--------CA-TT--AATGAT--CAAAT-AAGCTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-GAA-----------G---A----CAA--AGAC----AGA----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46483475 135 +  46592721 AGTGTCA---A-A---ATTAC-C---T--------CA-TT--AATGAT--CAAAT-AAGCTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-GAA-----------G---A----CAA--AGAC----AGA----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                       1586 122 -     27215 AGTGTCA---A-A---ATTAC-C---T--------CA-TT--AATGAT--CAAAT-AAGCTTT-TGGTTCACT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-GAA-----------G---A----CAA--AGAC----AGA----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------------------------
i Cercopithecus_neglectus.k141_2169300                  C 0 I 5
s Cercopithecus_nictitans.k141_1129315                       7786 135 +     35577 AGTGTCA---A-A---ATTAC-C---T--------CA-TT--AATGAT--CAAAT-AAGCTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-GAA-----------G---A----CAA--AGAC----AGA----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        7580 135 -     25661 AGTGTCA---A-A---ATTAC-C---T--------CA-TT--AATGAT--CAAAT-AAGCTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-GAA-----------G---A----CAA--AGAC----AGA----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        7752 122 -     17744 AGTGTCA---A-A---ATTAC-C---T--------CA-TT--AATGAT--CAAAT-AAGCTTT-TGGTTCACT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-GAA-----------G---A----CAA--AGAC----AGA----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------------------------
i Cercopithecus_pogonias.k141_3109732                   C 0 I 5
s Cercopithecus_roloway.k141_2263608                        27121 122 +     37128 AGTGTCA---A-A---ATTAC-C---T--------CA-TT--AATGAT--CAAAT-AAGCTTT-TGGTTCACT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-GAA-----------G---A----CAA--AGAC----AGA----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------------------------
i Cercopithecus_roloway.k141_2263608                    C 0 I 5
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           6137 110 -      6963 ------------------------------------------AATGAT--CAAAA-AGACTC---AACTCATT---ACA---ATGAGATGC---TCTGAACCTAAGTTG-AAT-----------G---A----CAG--AAAC----AGA----T-T--T-AG---GGGC-------TT-TAA-----------ATCCTT------A-GA---T-A----TG--TTA------------GCAGTTCTA----TTT-A
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      I 17 C 0
s Cheirogaleus_major.k141_1157592                           64677 136 -     68416 AGTGTTC---A-A---ATTAG-C---T--------CA-TT--AATGAT--CAAAT-AGGCCTT-TGGCTCATT---ATA---ATGAGATGTTCTTATACATCAAAGTTG-AAA-----------G---A----TAA--AGAT----AGA----T-T--T-AG---GAAT-------CT-TCA-----------ATCCAT------G-GA---A-A----AAA-TTA------------GCAATCCTA----ATT-A
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_854352                             979 135 +     27737 AGTGTTA---A-A---ATTAG-C---T--------CA-TT--AATGAT--CAAAT-AGGCCTT-TGGCTCATT---ATA---ATGAGATGTTCTTATACATCAAAGTTG-AAA-----------G---A----TTA--AGAT----AGA----T-T--T-AG---GAAT-------CT-TCA-----------ATCCTT------G-G----A-A----AAA-TTA------------GCAGTCCTA----ATT-A
i Cheirogaleus_medius.k141_854352                       C 0 C 0
s Cheracebus_lucifer.k141_619653                            10926 135 -     18223 AGTGCTA---A-A---ACTAC-C---T--------CA-TT--AATGAT--CAAAT-AGGATTT-TGGCTCTTT---GCA---ATGAGATGTTCCTATAAATCAAAGTTG-AAA-----------G---A----TCA--AGAC----AGA----T-T--T-GG---GGAT-------CT-TTA-----------ATTCTT------C-GA---A-A----AA--TCA------------GTAGTTCTA----TTT-A
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              2667 135 +    188999 AGTGCTA---A-A---ACTAC-C---T--------CA-TT--AATGAT--CAAAT-AGGATTT-TGGCTCTTT---GCA---ATGAGATGTTCCTATAAATCAAAGTTG-AAA-----------G---A----TGA--AGAC----AGA----T-T--T-GG---GGAT-------CT-TTA-----------ATTCTT------C-GA---A-A----AA--TCA------------GTAGTTCTA----TTT-A
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           46966 135 +     57117 AGTGCTA---A-A---ACTAC-C---T--------CA-TT--AATGAT--CAAAT-AGGATTT-TGGCTCTTT---GCA---ATGAGATGTTCCTATAAATCAAAGTTG-AAA-----------G---A----TGA--AGAC----AGA----T-T--T-GG---GGAT-------CT-TTA-----------ATTCTT------C-GA---A-A----AA--TCA------------GTAGTTCTA----TTT-A
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          51646 135 +     54541 AGTGCTA---A-A---ACTAC-C---T--------CA-TT--AATGAT--CAAAT-AGGATTT-TGGCTCTTT---GCA---ATGAGATGTTCCTATAAATCAAAGTTG-AAA-----------G---A----TGA--AGAC----AGA----T-T--T-GG---GGAT-------CT-TTA-----------ATTCTT------C-GA---A-A----AA--TCA------------GTAGTTCTA----TTT-A
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15966393 135 +  43084221 AGTGTTA---A-A---ATTAC-C---T--------CA-TT--AATGAT--CAAAT-AGACCTT-TGACTCATT---ATA---ATGAGATGTTTCTATGAACtggatttg-aaa-----------a---a----taa--agac----aga----t-t--t-gG---GAAT-------AT-TTG-----------ATCCTG------G-GG---A-A----AA--TCA------------ACAGTTCTA----ATT-A
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         76446 135 +    196370 AGTGCTA---A-A---ATTAC-G---T--------CA-TT--AATGAT--CAAAT-AGGATTT-TGGCTCTTT---ACA---ATGAGATGTTCCTATAAACCAAAGTTG-AGA-----------G---A----TGA--AGAC----AGA----T-T--T-GG---GGAT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          20627 135 +     40510 AGTGCTA---A-A---ATTAC-G---T--------CA-TT--AATGAT--CAAAT-AGGATTT-TGGCTCTTT---ACA---ATGAGATGTTCCTATAAACCAAAGTTG-AGA-----------G---A----TGA--AGAC----AGA----T-T--T-GG---GGAT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15145306 135 -  15256731 AGTGTCA---A-A---ATTAC-C---T--------CA-TT--AATGAT--CAAAT-AAGCTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-GAA-----------G---A----CAA--AGAC----AGA----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      39770 135 -     53260 AGTGTCA---A-A---ATTAC-C---T--------CA-TT--AATGAT--CAAAT-AAGCTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-GAA-----------G---A----CAA--AGAC----AGA----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101150329 135 + 101219884 AGTGTCA---A-A---ATTAC-C---T--------CA-TT--AATGAT--CAAAT-AAGCTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-GAA-----------G---A----CAA--AGAC----AGA----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                20154 138 -     21363 AGTGTTG---A-A---ATTGC-C---T--------CA-TT--AATGAT--GAAAA-AGACTCT-TGGCTCATT---ACA---ATGAGATGCTCCTGTGAATCTAAGTTG-AAT-----------G---A----CAA--AGAC----AGG----T-T--T-AG---G-GC-------CC-TCA-----------ATCCTT------G-CT---G-ATATTTA--TCA------------GTAGGTCTA----TTT-A
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           765458 138 +    964067 AGTGTTG---A-A---ATTGC-C---T--------CA-TT--AATGAT--GAAAA-AGACTCT-TGGCTCATT---ACA---ATGAGATGCTCCTGTGAATCTAAGTTG-AAT-----------G---A----CAA--AGAC----AGG----T-T--T-AG---G-GC-------CC-TCA-----------ATCCTT------G-CT---G-ATATTTA--TCA------------GTAGGTCTA----TTT-A
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_304221              3100 136 -      7053 AGTGGTA---A-A---ATTAT-C---T--------TT-TT--AATGAT--CAAAA-AAGTACT-TCTCTCCTT---TTA---ATGAGATGCTCCTATGAACCTAAGTTG-AAA-----------G---A----CAA--ATAG----AGA----T-T-TT-AA---AGAT-------TT-AAA-----------ATCCTT------T-GA---A-A----AA--TTG------------ACAGACTTA----ATT-G
i Chrysochloris_asiatica.ChrAsi_scaffold_304221         I 1 I 12
s Colobus_angolensis.KN985967.1                          10890100 134 +  10971483 AGTGTCA---A-A---ATTAC-C---T--------CA-TT--AGTGAT--CAAAT-AAGTTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTCG-AAA-----------G---A----CAA--AGAC----AGA----G-C--T-TG---GAGT-------CT-TTC-----------ATTCTT------G-G----A-A----AA--TCA------------GTAGCTCTG----TTT-A
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147668028 134 + 156195979 AGTGTCA---A-A---ATTAC-C---T--------CA-TT--AGTGAT--CAAAT-AAGTTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTCG-AAA-----------G---A----CAA--AGAC----AGA----G-C--T-TG---GAGT-------CT-TTC-----------ATTCTT------G-G----A-A----AA--TCA------------GTAGCTCTG----TTT-A
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            20011 134 +     23629 AGTGTCA---A-A---ATTAC-C---T--------CA-TT--AGTGAT--CAAAT-AAGTTTT-TGGTTCGTT---GTA---ATGAGATGTTCCTGTAAACCAAAGTCG-AAA-----------G---A----CAA--AGAC----AGA----G-T--T-TG---GAGT-------CT-TTC-----------ATTCTT------G-G----A-A----AA--TCA------------GTAGCTCTG----TTC-A
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60624413 142 +  78930452 TATGTTA---A-A---ATTATTA---G--------CAATT--AATTAT--CAAAATAGACTCT-TGTCTCATT---ATATTGATGAGAGCTTCCTATAAtccaaagtta-aaa-----------a---a----taa--agtc----ata----t-t--t-gg---ctat-------tt-taaa----------attttt------g-ga---t-a----AA--CTA------------GCAGTTTAA----ACT-G
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         4836 102 -      5782 AGTGTTA---A-A---ATT---A---TTATAATGTCA-TT--AATTAT--CAAAA-AGGCTCT-TGGCTCATT---ATA---ATGAGATGTTTCTATGATCCAAAGTTG-AAA-----------G---A----GAC--A--------GA----T-T--T-AG---GAA----------------------------------------------------------------------------------------
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 I 28
s Cricetomys_gambianus.CriGam_scaffold_949                 284449 135 -    399297 AGTGTGA---A-A---GTGAC-C---T--------CA-TT--AATGAT--CAAAT-AGGCCTT-TGACTCTTT---CTA---ATGAGATGTTTCTGTGAACCAAAATTG-AAA-----------G---A----GAA--AGAC----AGA----T-T--T-AG---GGAC-------CT-TCA-----------ATACTT------A-GA---A-A----AA--TCA------------GCAATTCTA----ATT-A
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53036734 136 +  72327488 AGTGTGA---A-A---GTGAC-C---T--------CA-TT--AATGAT--CAAAT-AGGCCTT-TGACTCTTT---ATA---ATGAGATGTTTCTGTGAAGCAAAATtg-aaa-----------g---a----gaa--aggc----aga----t-t--t-AG---GGAC-------CT-TCA-----------ATACTT------A-GA---AAA----AA--TCA------------TCAATTCTA----ATT-g
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              4301 127 -     22648 AGTGCTA---A-A---TTTATTA---C--------CA-AT--AATTAT--CAGTACTGACCCT-TTACTTATA---AT-----------GTTACTATAATCCAGAGTTA-AAA-----------G---A----TTT--AGGC-A--AGT----T-T--T-AG---GCAT-------TT-TCA-----------ACCTTT------G-GA---A-A----AT--T---------------CAGTTTTA----ATT-G
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            59824 131 -     70449 --TGTTA---A-A---ATTATTC---T--------CA-TT--AATTAT--CAAAT-AGGCTCT-TCGCTTATT---ATA---ATGAGATGTTCCTATGATCCAAAGTTG-AAC-----------A---A----TAC--AGAC----AGA----T-T--T-AA---GAAT-------CT-TCA-----------ATCCTT------T-GG---A-A----AA--T---------------CAGTGCTA----ATA-A
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  216584 135 -    956709 AGTGTTA---A-A---ATGAC-C---T--------CA-TT--GATGAT--AAAAT-TGGCCTT-TGACACATT---ATA---ATGAGTTACTGTTATGGACTAAATTTG-AAC-----------A---A----CAA--AGAA----AGA----T-T--T-GG---AGAT-------AT-TCA-----------ATCCTT------G-AA---T-A----GG--TAA------------ATAGTTTTA----ATT-A
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 38111 134 -     67205 AATGTTA---A-A---ATGAC-C---T--------CA-TT--AGTGAT--CTAAT-ACACCTT-TGACTTATT---ATA---ATGAGATGATTCTTTAAACCAAATTTA-AAA-----------A---G----TAT--AGAG----AGA----T-T--T-GG---GGAC-------AT-TCA-----------AGCCTT------G--G---A-A----AG--TCA------------ACAGTTCTA----AAT-A
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                22939  90 +     26546 AGTGTAA---A-A---ATGAC-C---T--------CA-TT--AATGAT--CG-AT-AGGCCTT-TGACTCATT---ATA---ATGAGATGTTTCTATGAACTGAATTTG-AAA-----------A---A----TAA--AGAC----AG------------------------------------------------------------------------------------------------------------
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 I 32
s Dasyprocta_punctata.DasPun_flattened_line_634             64083 125 -    236241 AGTGTTA---A-A---ATGAC-C---T--------CA-TT--AATGAT--CAAAT-AGGCCTT-TGACTCA------TA---ATGAGATGTTTCTATGAACTGAATTTG-AAC-----------A---A----TAA--AGAC----CGA----T-T--T-GG---GGAC-------AT-TGG-----------ATCCTG------G-GA---A-A----AA--TAG------------ACAAT---------T---
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          187196 110 -   6883506 ------------------------------------------AGTGAT--CAAAA-AGACTC---AGCTTATT---AAA---ATGAGATAC---TGTGAATCAAAGTTG-aat-----------g---a----caa--aaac----aaa----t-t--t-aG---GGGC-------TT-TAA-----------ATCCTT------A-GA---T-A----TA--TTA------------GGAATTCTC----TTC-A
i Dasypus_novemcinctus.JH568778.1                       I 17 C 0
s Daubentonia_madagascariensis.ctg11                     16850624 135 +  31942871 AGTGTTA---A-A---ATTAG-C---T--------CA-TT--AATGAT--CAAAT-AGGCCTT-TGGCTTATT---ATA---ATGAGATATTCCTATAAACCAAAGTTG-AAA-----------G---A----TAA--AGAC----AGA----T-T--T-AG---GGAT-------CT-TCA-----------ATCCTT------G-GA---A-A----AA--TCA------------GCAGTTCTA----ATT-A
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80042952 119 -  96802777 --------------------------------------TT--AATTAT--CAAAT-AGGCCCT-TGGCTCATT---ATA---ATGAGATGTTCCTATGATCCAAAGTTG-CAA-----------G---A----TAA--AGAC----AGA----T-C--T-AG----GAC-------CT-TCA-----------ATCTGT------G-G----A-A----AA--TCA------------GCAGTCCTGAATAATT-A
i Delphinapterus_leucas.KZ290064.1                      I 16 C 0
s Desmodus_rotundus.KZ672188.1                           18703392  77 -  18957592 AGtgtta---a-a---attatta---t--------ca-tt--aattaG--AAAAT-AGGCCTT-TGGCTCATT---A------TAAGATGTTCCTATGATCCAATGTTG-AA------------------------------------------------------------------------------------------------------------------------------------------------
i Desmodus_rotundus.KZ672188.1                          C 0 I 69
s Dicerorhinus_sumatrensis.PEKH010003161.1                 328853 115 +    993696 ------------------------------------------aattat--caaaT-AGGCCCT-AGGCTCATT---ATA---ATGAGCTATTCCTGTGATCCAAAGTTG-AAA-----------G---A----TAT--AGAC----AGA----T-G--C-AG---AGAT-------TT-TCA-----------ATCCTT------T-GG---A-A----AA--TCA------------GCAGTTCTA----ATT-A
i Dicerorhinus_sumatrensis.PEKH010003161.1              I 17 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   9487 115 +    151128 ------------------------------------------AATTAT--CAAAT-AGGCCCT-AGGCTCATT---ATA---ATGAGCTATTCCTGTGATCCAAAGTTG-AAA-----------G---A----TAT--AGAC----AGA----T-G--T-AG---AGAT-------TT-TCA-----------ATCCTT------T-GG---A-A----AA--TCA------------GCAGTTCTA----ATT-A
i Diceros_bicornis.DicBicMic_scaffold_9545              I 17 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   162005 135 +    228994 AGTGTTA---A-A---ATTAC-C---T--------CA-TT--AATGAT--CAACT-AGAACTT-TAACTCATT---ACA---ATGAGATGTTTCTATGAACTGAATTTG-AAA-----------A---G----TAA--AGAC----AGA----T-T--T-GG---GAAT-------AT-TTG-----------ATCCTG------G-GG---A-A----AA--TCA------------ACAGTTCTA----ATT-C
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3661727 137 +   4240102 AGTGTTA---G-T---CTGAC-C---T--------CG-TA--AATGAT--CAAAG-AGGCTTT-GAACTTATT---ATA---TTGAAATCTTCCTATAATCCAAAATTG-ATA-----------A---A----TAA--AGAG----AGA----T-T--T-AG---AGAT-------C--TCA-----------GTCTTC------G-GTGGGGAG----AA--TC-------------ATAGTTATA----GTT-A
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  4101 133 -     11986 AGTGTTA---G-T---CTGAC-C---T--------CA-TA--AATGAT--CAAAG-AGGCTTT-GAACTTATT---ATA---TTGAAATCTTCCTATAATACAAAATTG-ATA-----------A---A----TAA--AGAG----AGA----T-T--T-AG---AGAT-------CT-TCA-----------GTCTTT------G-GTGGGGAG----AA--TC-------------ATAGTTAT----------
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 I 1
s Dolichotis_patagonum.DolPat_scaffold_14102                42648 110 -     73477 TGATTAT---T-A---ATGAG-G---T--------CA-TTTTAACTCTTCCAAAT-AGGTCTT-TGATTCATT---ATA---ATGAGATGTTTCTATGAACTGAATTTG-AAA-----------A---A----TAA--AGAC----CCA----T-T--T-GT---GAAT-------AT-TTG--------------------------------------------------------------------------
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 I 13
s Echinops_telfairi.JH980316.1                           23007085 130 -  44670279 AGTGTTA---A-A---ATTAT-C---T--------TA-TT--AATGAT--CAAAA-AGGCCTT-TTTCTCATT---GTA---ATGAGATGGTCCTATGAACCTAAGTTG-AAA-----------G---A----TAA--A--------GG----T-G--T-AA---AGAT-------CT-TCA-----------ATCCTT------G-G----G-A----AG--CTG------------GCAGACATA----ATT-A
i Echinops_telfairi.JH980316.1                          I 1 C 0
s Eidolon_helvum.KE772537.1                                 15554 132 +     24177 agtgtta---a-a---attatta---t--------ca-tt--aattat--caAAT-AGGCCCT-TGGCTCATT---ATA---ATGAGATGTTCCTATGATCTAAAGTTG-AAA-----------G---A----TAA--A--------GA----T-T--T-AG---AAAT-------CT-TCA-----------ATCCTT------T-GA---A-A----AA--TCA------------GGAGTTCTA----GTA-A
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1498934 117 +   1727528 ------------C---ATTAATA---T--------CA-T------TAT--CTGGC-AGGCACT-TAGCTTATT---ATT---AT-----GTTCCTATAatccaaaatta-aaa-----------g---a----aaa--caac----aga----c-c--T-AG----GAT-------CT-CCA-----------ATCCTT------G-G----A-A----AA--TCA------------GCAGTTCTA----ATT-A
i Elaphurus_davidianus.JRFZ01086400.1                   I 2 C 0
s Elephantulus_edwardii.JH947210.1                        7836881 125 +  15467074 AGTGCAC---A-A---ATTAT-C---T--------CA-TT--AATGGT--GAAAA-AAAT--------GCAAT---GTA---ATGAGATATCACTGTGAAcacatattg-gaa-----------a---a----aaa--a-------aag----t-t--t-aa---aggt-------cc-tca-----------atcctt------g-ga---a-a----aa--ttg------------GCACTTCTA----AAG-A
i Elephantulus_edwardii.JH947210.1                      I 1 C 0
s Ellobius_lutescens.LOEQ01003611.1                        245436 136 -    369425 AGTGTGA---A-A---GTGAC-C---T--------CA-Tt--aatgat--caaat-aggcttc-tgACTCTTT---ATA---ATGAGATCTTTCTATGAACCAAAATTG-AAA-----------G---A----GAA--GGAC----AGA----T-T--T-AG---GGAC-------CTTTCA-----------GTACTT------A-GA---A-A----AA--TTA------------CCAATTcta----att-a
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01076532.1                           1788 135 +      9159 AGTGTGA---A-A---GTGAC-C---T--------CA-TT--AATGAT--CAAAT-AGGCCTT-TGACTCTTT---ATA---ATGAGATCTTTCTGTGAAGCAAAATTG-AAA-----------G---A----GAA--GGAC----AGA----T-T--T-AG---GGAC-------CT-TCA-----------GTACTT------A-GA---A-A----AA--TCA------------CCAATTCta----att-a
i Ellobius_talpinus.LOJH01076532.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85879763 141 +  99434291 -ATGTTA---A-A---ATTATTC---T--------CA-CT--AATTAT--CAAAT-AGGACC--TGGTTCATT---ATA---ATGAGATGTTCCTATGATCCAAAGTTG-AAT-----------G---A----TAT--AGAG----AGA----C-T--T-Gg---gaat-------tt-t-aatcttttgttaaTCTTT------T-GG---A-A----AA--T---------------CAGTTCTA----AAA-A
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4711153 136 +   6522550 AGTGtca---a-a---attatta---t--------ca-tt--aattat--cAAAT-AGGACTT-TGGATCATT---AGA---ATAAGATGATCCTATGATCCAAAGTTG-ACA-----------G---A----TAA--AGAC----ATA----T-T--T-TG---GGCA-------CT-TGA-----------ATCCTT------T-GA---A-A----AT--TCA------------GCAGTTCTA----ATA-A
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5858713 115 -   7175178 ------------------------------------------aattat--caaat-AGGCCCT-AGGATCATT---ATA---ATGAGATATTCCTATGATCCAAAGTTG-AAA-----------G---T----TAT--AGAC----AGA----T-T--T-AG---AGAT-------CT-TCA-----------ATCCGT------C-GG---A-A----AA--TGA------------GCACTTGTA----ATT-A
i Equus_asinus.JREZ01000062.1                           I 17 C 0
s Equus_caballus.CM000402.2                              13357199 115 +  41866177 ------------------------------------------aattat--caaat-AGACCCT-AGGATCATT---ATA---ATGAGATATTCCTATGATCCAAAGTTG-AAA-----------G---T----TAT--AGAC----AGA----T-T--T-AG---AGAT-------CT-TCA-----------ATCCGT------C-GG---A-A----AA--TGA------------GCACTTGTA----ATT-A
i Equus_caballus.CM000402.2                             I 17 C 0
s Equus_przewalskii.ATBW01073585.1                          18689 115 +     92910 ------------------------------------------aattat--caaat-AGACCCT-AGGATCATT---ATA---ATGAGATATTCCTATGATCCAAAGTTG-AAA-----------G---T----TAT--AGAC----AGA----T-T--T-AG---AGAT-------CT-TCA-----------ATCCGT------C-GG---A-A----AA--TGA------------GCACTTGTA----ATT-A
i Equus_przewalskii.ATBW01073585.1                      I 17 C 0
s Erinaceus_europaeus.JH835290.1                         11544175 135 +  16010500 AGTGTTA---A-A---ATTATCA---T--------AA-TT--AATTAT--CAAAT-AGGCTCT-TGACTCATT---ATA---ATGAGATGTACCTATGAttcaaaatta-aaa-----------g---a----caa--agat----aga----T-T--T-AG---GGAT-------AT-TTA-----------GCCCTT------G-AA---A-A----A---TCA------------GCAGTTCTC----ATT-A
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48782339 135 -  48907691 AGTGTCA---A-A---ATTAC-C---T--------CA-TT--AATGAT--CAAAT-AAGCTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-GAA-----------G---A----CAA--AGAC----AGA----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          321211 119 +    330699 --------------------------------------TT--AATTAT--CAACT-AGGCCCT-TGGCTCATT---ATA---ATGAGATGTTCCTATGATCCAAAGTTG-AAA-----------C---A----TAA--AGAC----AGA----T-C--T-AG----GAT-------CT-TCA-----------ATCTTT------G-G----A-A----AA--TCA------------GCAGTCCTAAATAATT-A
i Eschrichtius_robustus.EscRob_flattened_line_685       I 16 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             67663 119 +     89355 --------------------------------------TT--AATTAT--CAAAT-AGGCCCT-TGGCTCATT---ATA---ATGAGATGTTCCTATGATCCAAAGTTG-AAA-----------C---A----TAA--AGAC----AGA----T-C--T-AG----GAT-------CT-TCA-----------ATCTTT------G-G----A-A----AA--TCA------------GCAGTCCTAAATAATT-A
i Eubalaena_japonica.EubJap_flattened_line_7756         I 16 C 0
s Eulemur_albifrons.k141_715837                             10741 138 +     13586 AGTGTTA---A-A---ATTAG-C---T--------AA-TT--AATGAT--CAAAT-AGACCTT-TTGCTCATT---ATA---ATGAGATGTTCCTATAAACCAAAGTTG-AAA-----------G---A----TAAAGAGAT----AGA----T-T--T-AG---GAAT-------CT-TCA-----------ATCCTT------G-GA---A-A----AAA-TTA------------GCAGTCCTA----ATT-A
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_1015201                              4000 138 -      4292 AGTGTTA---A-A---ATTAG-C---T--------AA-TT--AATGAT--CAAAT-AGACCTT-TTGCTCATT---ATA---ATGAGATGTTCCTATAAACCAAAGTTG-AAA-----------G---A----TAAAGAGAT----AGA----T-T--T-AG---GAAT-------CT-TCA-----------ATCCTT------G-GA---A-A----AAA-TTA------------GCAGTCCTA----ATT-A
i Eulemur_collaris.k141_1015201                         C 0 C 0
s Eulemur_coronatus.k141_3240342                            17137 138 +     36558 AGTGTTA---A-A---ATTAG-C---T--------CA-TT--AATGAT--CAAAT-AGATCTT-TTGCCCATT---ATA---ATGAGATGTTCCTATAAACCAAAGTTG-AAA-----------G---A----TAAAGAGAT----AGA----T-T--T-AG---GAAT-------CT-TCA-----------ATTCTT------G-GA---A-A----AAA-TTA------------GCAGTCCTA----ATT-A
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            13459 138 +     60246 AGTGTTA---A-A---ATTAG-C---T--------AA-TT--AATGAT--CAAAT-AGACCTT-TTGCTCATT---ATA---ATGAGATGTTCCTATAAACCAAAGTTG-AAA-----------G---A----TAAAGAGAT----AGA----T-T--T-AG---GAAT-------CT-TCA-----------ATCCTT------G-GA---A-A----AAA-TTA------------GCAGTCCTA----ATT-A
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                16944 138 +    109717 AGTGTTA---A-A---ATTAG-C---T--------CA-TT--AATGAT--CAAAT-AGACCTT-TTGTTCATT---ATA---ATGAGATGTTCCTGTAAACCAAAGTTG-AAA-----------G---A----TAAAGAGAT----AGA----T-T--T-AG---GAAT-------CT-TCA-----------ATCCTT------G-GA---A-A----AAA-TTA------------GCAGTCCTA----ATT-A
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 4927 138 -     19505 AGTGTTA---A-A---ATTAG-C---T--------AA-TT--AATGAT--CAAAT-AGACCTT-TTGCTCATT---ATA---ATGAGATGTTCCTATAAACCAAAGTTG-AAA-----------G---A----TAAAGAGAT----AGA----T-T--T-AG---GAAT-------CT-TCA-----------ATCCTT------G-GA---A-A----AAA-TTA------------GCAGTCCTA----ATT-A
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                21602 138 +     27497 AGTGTTA---A-A---ATTAT-C---T--------CA-GT--AATGAT--CAAAT-AGACCTT-TTGCTCATT---ATA---ATGAGATGTTTCTATAAACCAAAGTTG-AAA-----------G---A----TAAAGAGAT----AGA----T-T--T-AG---GAAT-------CT-TCA-----------ATCCTT------G-GA---A-A----AAA-TTA------------GCAGTCCTA----ATT-A
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           24058 138 +     26808 AGTGTTA---A-A---ATTAG-C---T--------AA-TT--AATGAT--CAAAT-AGACCTT-TTGCTCATT---ATA---ATGAGATGTTCCTATAAACCAAAGTTG-AAA-----------G---A----TAAAGAGAT----AGA----T-T--T-AG---GAAT-------CT-TCA-----------ATCCTT------G-GA---A-A----AAA-TTA------------GCGGTCCTA----ATT-C
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                38790 138 +     46535 AGTGTTA---A-A---ATTAG-C---T--------AA-TT--AATGAT--CAAAT-AGACCTT-TTGCTCATT---ATA---ATGAGATGTTCCTATAAACCAAAGTTG-AAA-----------G---A----TAAAGAGAT----AGA----T-T--T-AG---GAAT-------CT-TCA-----------ATCCTT------G-GA---A-A----AAA-TTA------------GCAGTCCTA----ATT-A
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              21531 138 -     29447 AGTGTTA---A-A---ATTAG-C---T--------AA-CT--AATGAT--GAAAT-AGACCTT-TTGCTCATT---ATA---ATGAGATGTTCCTATAAACCAAAGTTG-AAA-----------G---A----TAAAGAGAT----AGA----T-T--T-AG---GAAT-------CT-TCA-----------ATCCTT------G-GA---A-A----AAA-TTA------------GCAGTCCTA----ATT-A
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129901465 133 - 159252932 AGTGTTA---A-A---TTTATTC---T--------CA-TT--AATTAT--CAGAT-AGGCCCT-TGGCTTATT---ATA---ATGAGATGTTCCTATGATCCAAAGTTG-AAC-----------A---A----TAT--AGAC----AGA----T-T--T-AA---GAAT-------CT-TCA-----------ATTCTT------T-GG---A-A----AA--T---------------CAGGGATA----ATA-A
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129288442 133 - 158578461 AGTGTTA---A-A---TTTATTC---T--------CA-TT--AATTAT--CAGAT-AGGCCCT-TGGCTTATT---ATA---ATGAGATGTTCCTATGATCCAAAGTTG-AAC-----------A---A----TAT--AGAC----AGA----T-T--T-AA---GAAT-------CT-TCA-----------ATTCTT------T-GG---A-A----AA--T---------------CAGGGATA----ATA-A
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 29632 133 +     52776 AGTGTTA---A-A---TTTATTC---T--------CA-TT--AATTAT--CAGAT-AGGCCCT-TGGCTTATT---ATA---ATGAGATGTTCCTATGATCCAAAGTTG-AAC-----------A---A----TAT--AGAC----AGA----T-T--T-AA---GAAT-------CT-TCA-----------ATTCTT------T-GG---A-A----AA--T---------------CAGGGATA----ATA-A
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13899503  85 -  19261668 AGCATTA---A-A---ATGCT-C---T--------CA-TC--AATGAT--CAAAT-AGGCCTT-TGACTCATT---ATA---ATGAGATGTCTCTT---ACCAAAGTAG-AAA-----------A---G----TAG--AG--------A-----------------------------------------------------------------------------------------------------------
i Fukomys_damarensis.KN123630.1                         C 0 I 33
s Galago_moholi.ctg555                                     216786 135 -    847004 AGTGTTA---A-T---ATTAG-C---T--------CA-TT--AATGAT--CAAAT-AGGCCTT-CAGCTCATT---ATA---ATGAGATGTTTCTATATACCAAAATTG-AAA-----------G---A----TAA--AGAT----AGA----T-T--T-AG---GGAT-------CT-TCA-----------ATCCTT------G-GA---A-A----AA--TCA------------GCAGTCCTA----ATT-A
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           19148 135 -     43889 AGTGTTA---A-T---ATTAG-C---T--------CA-TT--AATGAT--CAAAT-AGGCATT-CAGCTCATT---ATA---ATGAGATGTTTCTATATACCAAAATTG-AAA-----------G---A----TAA--AGAT----AGA----T-T--T-AG---GGAT-------CT-TCA-----------ATCCTT------G-GA---A-A----AA--TCA------------GCAGTCCTA----ATT-A
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          16289 135 +     27357 AGTGTTA---A-T---ATTAG-C---T--------CA-TT--AATGAT--CAAAT-AGGCCTT-CAGCTCATT---CTA---ATGAGATGTTTCTATATACCAAAATTG-AAA-----------G---A----TAA--AGAT----AGA----T-T--T-AG---GGAT-------CT-TCA-----------ATCCTT------G-GA---A-A----AA--TCA------------GCAGTCCTA----ATT-A
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               161057 135 +    324696 AATATTA---A-A---ATTAC-C---T--------CA-TT--AATGAT--CAAAT-AAGCCTT-TGGCTCATT---ATA---ATGAGATGTTCCTAGAAACCAAAGTTG-AAA-----------G---A----TGA--AGAC----AGA----T-T--T-AG---GGAT-------CT-TCA-----------ATCCTT------A-GA---A-A----AA--TCA------------GCAGTTCTA----ATT-A
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    188659 120 -    189561 ------------C---ATTAACATTAT--------CA-T------TAT--CCAGC-AGGTCCT-TAGCTCATT---ATA---AT-----GTTCCTATAATccaaaattg-aaa-----------g---a----aaa--caac----aga----c-C--T-AG----GAT-------CT-CCA-----------ATCCTT------G-G----A-A----AA--TCA------------GCAGTTCTA----ATT-A
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 2 C 0
s Glis_glis.GliGli_scaffold_79770                           17983 121 -     18683 AGTGTTA---A-G---ATGAC-C---C--------CA-TT--AATGAT--CAAAC-AGGCTTT-TGACTCATT---ATA---ATGAGATGCTCCTATGAACCAAAGTTA-AAA-----------G---A----TAG--AGAC----AGA----G-T--T-AG---GATTTAGGATGCT-TCA-----------ATCCTC------A-G------------------------------------------------
i Glis_glis.GliGli_scaffold_79770                       C 0 I 30
s Gorilla_beringei.k141_111300                              10742 133 -     14630 AGTGTCA---A-A---TTTAC-C---T--------CA-TT--AATTAT--CAGAT-AGGTTTT-TGGCTCATT---GTA---ATTAGATGTTCCTATAAACCAAAGTTG-AAA-----------G---A----CAA--AGAC----AGG----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GT---A-A----AA--TCA------------GTAGCT--A----TTT-A
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119657842 133 - 195582420 AGTGTCA---A-A---TTTAC-C---T--------CA-TT--AATTAT--CAGAT-AGGTTTT-TGGCTCATT---GTA---ATTAGATGTTCCTATAAACCAAAGTTG-AAA-----------G---A----CAA--AGAC----AGG----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GT---A-A----AA--TCA------------GTAGCT--A----TTT-A
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   81287 135 +    118900 AGTGTTA---A-G---ATGAC-C---C--------CA-TT--AATGAT--CAAAG-AGTCTTT-TGACTCATT---ATA---ATGAGATGCTCCTATGAATTGAAGTTG-AAA-----------G---A----TAA--AGAC----AGA----G-T--T-AG---GATT-------CT-TCA-----------ATTCTT------G-GT---C-A----AG--TCA------------GCAGTTCCA----GTT-A
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         7533 138 +     10286 AGTGTTA---A-A---ATTAG-C---T--------CA-TT--AATGAT--CAAAT-AGACCTT-TGGCTCATT---ATA---ATGAGATGTTCCTATAAACCAAAGTTG-AAA-----------G---A----CAAAGAGAT----AGA----T-T--T-AG---GAAT-------CT-TCA-----------ATCCTT------G-GA---A-A----AAA-TTA------------GCAGTCCTA----ATT-A
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             6014 138 -     11661 AGTGTTA---A-A---ATTAG-C---T--------CA-TT--AATGAT--CAAAT-AGACCTT-TGGCTCATT---ATA---ATGAGATGTTCCTATAAACCAAAGTTG-AAA-----------G---A----CAAAGAGAT----AGA----T-T--T-AG---GAAT-------CT-TCA-----------ATCCTT------G-GA---A-A----AAA-TTA------------GCAGTCCTA----ATT-A
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                            11338 138 +     56096 AGTGTTA---A-G---ATTAG-C---T--------CA-TT--AATGAT--CAAAT-AGACCTT-TGGCTCATT---ATA---ATGAGATGTTCCTATAAACCAAAGTTG-AAA-----------G---A----CAAAGAGAT----AGA----T-T--T-AG---GAAT-------CT-TCA-----------ATCCTT------G-GA---A-A----AAA-TTA------------GCAGTCCTA----ATT-A
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        34587 138 -     42470 AGTGTTA---A-A---ATTAG-C---T--------CA-TT--AATGAT--CAAAT-AGACCTT-TGGCTCATT---ATA---ATGAGATGTTCCTATAAACCAAAGTTG-AAA-----------G---A----CAAAGAGAT----AGA----T-T--T-AG---GAAT-------CT-TCA-----------ATCCTT------G-GA---A-A----AAA-TTA------------GCAGTCCTA----ATT-A
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        51213 138 -     54384 AGTGTTA---A-A---ATTAG-C---T--------CA-TT--AATGAT--CAAAT-AGACCTT-TGGCTCATT---ATA---ATGAGATGTTCCTATAAACCAAAGTTG-AAA-----------G---A----CAAAGAGAT----AGA----T-T--T-AG---GAAT-------CT-TCA-----------ATCCTT------G-GA---A-A----AAA-TTA------------GCAGTCCTA----ATT-A
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              24942 131 +     53719 --TGTTA---A-A---ATAATTC---T--------CA-TT--AATTAT--CGAAT-AGGCCCT-TTGCTTATT---ATA---ATGAGATATTCCTATGATCCAAAGTTG-AAC-----------A---A----TAT--AGAC----AGA----T-A--T-AA---GAAT-------CT-TCA-----------ATCCTT------T-GG---A-A----AA--T---------------GAGTACTA----ATT-A
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                35761 109 -     91191 --------------------------T--------CA-T------TAT--CCAGC-AGGCCCT-TAGCTCATT---ATA---AT-----GTTCCTATAATCCAAAATTG-AAA-----------G---A----AAA--AAAC----AGA----C-C--T-AG----GAT-------CT-CCA-----------ATCCTT------G-G----A-A----AA--TCA------------GCAGTTTTA----ATT-A
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 7 C 0
s Heterocephalus_glaber.JH602058.1                        2563656 130 +  31725842 AGTGTTA---A-A---ATGAC-C---T--------CA-GT--AATGAT--CACAC-AGGCTTT-TGACTTATT---ATA---ATGAGATGGCTCTA---accaaagttg-aaa-----------a---a----taa--ag------aga----t-t--t-gg---GGAT-------AT-TCG-----------ACCATT------C-AA---A-A----AA--TCA------------ACAGTTCTA----GTT-A
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               65232 135 +     73687 AGTGTTA---A-A---ATGAC-C---T--------TA-TA--AGTGAT--CAAAA-AGATCCT-TATCTCACT---GTA---ATGAGATGCATCTATGAACCTCAGTTG-AAA-----------G---A----TAA--ATAC----AGA----T-C--T-AG---AGAT-------CT-TCA-----------ATCCTT------G-GA---A-A----AC--ACA------------CCAGTTCTA----ATT-A
i Heterohyrax_brucei.HetBruBak_scaffold_25354           I 1 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              153038 116 +    277961 --------------------------------------TT--AATTAT--CAAAC-AGGCCCT-TGTCTCATT---ATA---AT---ATGTTCCTATGATCCAAAGTTG-AAA-----------G---A----TAA--AGAC----AGA----T-C--T-AG----GGT-------CT-TCA-----------ACCTTT------G-G----C-A----AA--TGA------------GCAGTTCTAAATAATT-A
i Hippopotamus_amphibius.HipAmp_scaffold_1308           I 16 C 0
s Hipposideros_armiger.JXIK01001085.1                      286491 136 -    477199 AGTGTTA---A-ACTTATT---A---T--------CA-TT--AATTAT--CAAAT-AGGCCCT-TGGCTCATC---ATA---ATGAGATATTCCTATGATCCAAAGTTG-AAA-----------G---A----TAA--A---GACA-GA----T-T--T-AG---GAAG-------CT-TCA-----------ATCCTT------T-GG---A-A----AA--TCA------------GCAGTTCTA----ATA-A
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959               3764 136 +     26078 AGTGTTA---A-ACTTATT---A---T--------CA-TT--AATTAT--CAAAT-AGGCCCT-TGGCTCATC---ATA---ATGAGGTATTCTTATGATCCAAAGTTG-AAA-----------G---A----TAA--A---GACA-GA----T-T--T-AG---GAAG-------CT-TCA-----------ATCCTT------T-GG---A-A----AA--TCA------------GCAGTTATA----ATA-A
i Hipposideros_galeritus.HipGal_scaffold_52959          C 0 C 0
s Hoolock_leuconedys.ctg79                                     10659  85 -   7690867 AGTGTCA---A-A---ATTAC-C---T--------CA-TT--AATGAT--CACAT-AGGCTTT-TGGCTCATT---GTA---ATGAGATGTTCCTATCAACCAAAGTTG-AAA-----------G---A----CAA------------------------------------------------------------------------------------------------------------------------
i Hoolock_leuconedys.ctg79                                 C 0 I 50
s Hyaena_hyaena.HyaHya_flattened_line_20729                 25379 130 -     67322 AGTGTTA---A-A---ATTATTC---T--------CA-TT--AATTAT--CAAAT-AGGCCCT-TCGCTTATT---ACA---ATCAGATGTTCCTATGATCCAAAGTTG-AAT-----------A---A----TA------C----AGA----T-T--T-GA---GAAT-------CT-TCA-----------ATCCTT------T-GG---A-A-A--AA--T---------------TAGTGCAA----ATA-A
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           23304 127 -    119109 AGTTTTA---A-A---ATGAC-C---T--------CA-TT--AATGAT--TGAAT-AGGTCTT-TGATTCATT---ATA---ATGAGATGTTTCTATGAACTGAATTTG-AAA-----------A---C----TAA--AGTT----AGA----T-T--T-GT---GAAT-------AT-TCG-----------ATCCTG------A-GA---A-A----AA--TTG------------ACAGT-------------
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_1620906                              168  85 -     33653 AGTGTCA---A-A---ATTAC-C---T--------CA-AT--AATGAT--CACAT-AGGCTTT-GGGCTCATT---GTA---ATGAGATGTTCCTATCAACCAAAGTTG-AAA-----------G---A----CAA------------------------------------------------------------------------------------------------------------------------
i Hylobates_abbotti.k141_1620906                        C 0 I 45
s Hylobates_agilis.k141_1136966                              1239  85 +      9785 AGTGTCA---A-A---ATTAC-C---T--------CA-TT--AATGAC--CACAT-AGGCTTT-TGGCTCATT---GTA---ATGAGATGTTCCTATCAACCAAAGTTG-AAA-----------G---A----CAA------------------------------------------------------------------------------------------------------------------------
i Hylobates_agilis.k141_1136966                         C 0 I 46
s Hylobates_klossii.k141_468230                              4719  85 +      5464 AGTGTCA---A-A---ATTAC-C---T--------CA-TT--AATGAT--CACAT-AGGCTTT-TGGCTCATT---GTA---ATGAGATGTTCCTATCAACCAAAGTTG-AAA-----------G---A----CAA------------------------------------------------------------------------------------------------------------------------
i Hylobates_klossii.k141_468230                         C 0 I 46
s Hylobates_pileatus_b.ContigUN                                 14630065  85 -  25970782 AGTGTCA---A-A---ATTAC-C---T--------CA-TT--AATGAT--CACAT-AGGCTTT-TGGCTCATT---GTA---ATGAGATGTTCCTATCAACCAAAGTTG-AAA-----------G---A----CAA------------------------------------------------------------------------------------------------------------------------
i Hylobates_pileatus_b.ContigUN                                C 0 I 46
s Hylobates_muelleri.k141_1139146                            2616  85 +      4161 AGTGTCA---A-A---ATTAC-C---T--------CA-AT--AATGAT--CACAT-AGGCTTT-TGGCTCATT---GTA---ATGAGATGTTCCTATCAACCAAAGTTG-AAA-----------G---A----CAA------------------------------------------------------------------------------------------------------------------------
i Hylobates_muelleri.k141_1139146                       C 0 I 46
s Hystrix_cristata.HysCri_scaffold_50788                    11580 135 +     22540 AGTGTTA---A-A---AAGAC-C---T--------CA-TT--AATGAT--CAAAT-AGGCCTT-TCACTCATT---ACA---ATGAGATGTTGCCATGATCCAGAGTTG-AAA-----------A---A----TAG--AGGC----AGA----A-T--T-AG---GGAT-------AT-TTG-----------ATCCTT------G-GA---A-A----AA--TCA------------AGAGCTCTA----ATT-A
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7131841 135 +  13083262 AGTGTTA---A-A---ATGAC-C---T--------CA-TT--AATGAT--CAAAC-AGGACTT-TGACTCATT---GTA---ATGAGATGTTCCTAAGAaccaaatttt-taa-----------t---a----taa--agac----agA----T-T--T-AG---GGAT-------CT-TCA-----------ATTCTT------G-GG---A-A----AA--TCA------------GCAGTTCTA----ATC-A
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   3072 137 +      3484 AGTGTTA---A-A---ATTAG-C---T--------CA-TT--AATGAT--CAAAT-AGACCTT-TGACTCATT---ATA---ATGAGATATTCCTATAAACCAAAGTTG-AAA-----------G---A----TAA--AGAT----AGA----T-T--T-AG---GAAT-------CC-TTG-----------ATCCTT------G-GA---A-A----AAAAATA------------GCAGTCCTA----ATT-A
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              15179 119 +     17520 --------------------------------------TT--AATTAT--CAAAT-AGGCCCT-TGGCTCATT---ATA---ATGAGATGTTCCTATGATCCAAAGTTG-CAA-----------G---A----TAA--AGAC----AGA----T-C--T-AG----GAT-------CT-TCA-----------ACCTGT------G-G----G-A----AA--TCA------------GCTGTCCTGAATAATT-A
i Inia_geoffrensis.IniGeo_flattened_line_66725          I 16 C 0
s Jaculus_jaculus.JH725517.1                              8580642 136 +  11848649 AGTGTTA---A-A---ATGAC-T---A--------CA-TT--AATGAT--CAAAT-AGGCCTT-TGATTCATT---ATA---ATGAGATGTTTCTATGAACCAAAattg-aaa-----------g---a----caa--aaac----aga----t-T--T-AG---GGAT-------CT-Tca-----------atactt-a----g-aa---a-a----aa--ata------------gcaaacctA----ATT-A
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               29808 119 +     37189 --------------------------------------TT--AATTAT--CAAAT-TAGCCCT-TGGCTCATT---ATA---ATGAGATGTTCCTATGATCCAAAGTTG-AAA-----------G---A----TAC--AGAC----AGA----C-C--T-AG----GAT-------CT-TCA-----------ATCTGT------G-G----A-A----AA--TCA------------GCAGTCCTAAATAATT-A
i Kogia_breviceps.KogBre_flattened_line_35920           I 16 C 0
s Lagothrix_lagothricha.k141_12968                          55490 135 -    147782 AGTGCTA---A-A---ATTAC-C---T--------CA-AT--AATGAT--CAAAT-AGGATTT-TGGCTCTTT---GTA---ATGAGATGTTCCTATAAACCAATGTTG-AAA-----------G---A----TGA--AGAC----AGA----T-T--T-TG---GGAT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAATTCTA----TTT-A
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    8853 136 +     26176 AGTGTCA---A-A---ATTATTA---T--------CT-TT--AATTAT--TAAAT-AGGCCTT-TGGATCATT---AGA---ATAAAATGATCCTATCATCCAAACTTG-ATA-----------A---T----TAA--AAAC----ATA----T-T--T-TG---GTCA-------CT-TTA-----------ATCCTT------T-GA---T-A----AT--TCA------------GCAGTTATA----ATA-A
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258412891 138 - 285822530 AGTGTTA---A-A---ATTAG-C---T--------CA-TT--AATGAT--CAAAT-AGACCTT-TGGCTCATT---ATA---ATGAGATGTTCCTATAAACCAAAGTTG-AAA-----------G---A----CAAAGAGAT----AGA----T-T--T-AG---GAAT-------CT-TCA-----------ATCCTT------G-GA---A-A----AAA-TTA------------GCAGTCCTA----ATT-A
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        30211 139 +     39228 AGTATTATTAA-A---ATTAG-C---T--------CA-TT--AATGAT--CAAAT-AGGCCTT-TGGGTCATT---ATA---ATGAGATGTTCTTATAAACCAAAGTTG-AAA-----------G---A----TAA--AGAT----AGA----T-T--T-AG---GAAT-------TT-TCA-----------ATCCTT------G-GA---A-A----AAA-TTA------------GCAGTCCTA----TTT-C
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            59575 139 +     63517 AGTATTATTAA-A---ATTAG-C---T--------CA-TT--AATGAT--CAAAT-AGGCCTT-TGGCTCATT---ATA---ATGAGATGTTCTTATAAACCAAAGTTG-AAA-----------G---A----TAA--AGAT----AGA----T-T--T-AG---GAAT-------TT-TCA-----------ATCCTT------G-GA---A-A----AAA-TTA------------GCAGTCCTA----TTT-T
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        37959 136 -     38897 AGTATTA---A-A---ATTAG-C---T--------CA-TT--AATGAT--CAAAT-AGGCCTT-TGGCTCATT---ATA---ATGAGATGTTCTTATAAACCAAAGTTG-AAA-----------G---A----TAA--AGAT----AGA----T-T--T-AG---GAAT-------TT-TCA-----------ATCCTT------G-GA---A-A----AAA-TTA------------GCAGTTCTA----TTT-A
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      4001 139 -     13103 AGTATTATTAA-A---ATTAG-C---T--------CA-TT--AATGAT--CAAAT-AGGCCTT-TGGCTCATT---ATA---ATGAGATGTTCTTATAAACCAAAGTTG-AAA-----------G---A----TAA--AGAT----AGA----T-T--T-AG---GAAT-------TT-TCA-----------ATCCTT------G-GA---A-A----AAA-TTA------------GCAGTCCTA----TTT-C
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3094213 132 -   3498232 AGTGTTA---A-A---GTTATTC---T--------TA-CT--AATTAT--CAAAT-AGGCCCT-TGGTTCATT---ATA---ATGAGATGTTCCTATGATCCAAAGTTG-AAT-----------G---A----TAT--AGAC----AAA----C-T--T-GG---GAAT-------CT-T-A-----------ATCCTT------T-GG---A-A----AA--T---------------CAGTTCTA----ATA-A
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_1475380                    245 113 -       358 ----------------ATTAT-A---T--------CA-TT--AATAAT--CAAAT-AGGTCTT-TGACTCATTCTAATA---ATAAAGTGTTCCTATGAAACAAAA-TG-AAA-----------A---A----TAA--ACAG----AGA----T-T--T-AG---GGAA-------CT-TCA-----------ATCCTT------G-GG---A-A----AA--T--------------------------------
i Lepus_americanus.LepAme_scaffold_1475380              I 8 n 8
s Lipotes_vexillifer.KE558548.1                            142101 119 +   3060487 --------------------------------------TT--AATTAT--CAAAG-AGGCCCT-TGGCTCATT---ATA---ATGAGAAGTTCCTATGATCCAAAGTTG-CAA-----------G---A----TAA--AGAC----AGA----T-C--T-AG----GAT-------CT-TCA-----------ATCTGT------G-G----A-A----AA--TCA------------GCAGTCCTGAATAATT-A
i Lipotes_vexillifer.KE558548.1                         I 10 C 0
s Lophocebus_aterrimus.ctg55                             19253959 135 +  19376315 AGTGTCA---A-A---ATTAC-C---T--------CA-TT--ACTGAT--CAAAT-AAGCTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-GAA-----------G---A----CAA--AGAC----AGA----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAACTCTA----TTT-A
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           16729 135 +     84689 AGTGTTA---A-T---ATTAG-C---T--------CA-TT--AATGAT--CAAAT-AGGCCTT-TGGCTCGTT---ATA---ATGAGATGTCTCTATATACCAAAATTG-AAA-----------G---A----TAA--AGAT----AGA----T-T--T-AG---GGAT-------CT-TCA-----------ATCCTT------G-GA---A-A----AA--TCA------------GCAGTCCTA----ATT-A
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3784462 135 +   6799190 AGTGTTA---A-T---ATTAG-C---T--------CA-TT--AATGAT--CAAAT-AGGCCTT-TGGCTCGTT---ATG---ATGAGATGTCTCTATATACCAAAATTG-AAA-----------G---A----TAT--AGAT----AGA----T-T--T-AG---GGAT-------CT-TCA-----------ATCCTT------G-GA---A-A----AA--TCA------------GCAGTCCTA----ATT-A
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20600798 117 -  62548349 ACTGTTA---A-A---ATGAC-C---T--------CA-TT--AATGAT--CAAAA-AGGCCCT-TCTCTCATT---ATA---ATGAGATCCTCCTATGAACATAAGTTG-AAA-----------G---A----TAA--ACAT----AGG----T-T--T-AG---AGAT-------CT-TCA-----------ATCCTT------G-GA---A-A-----------------------------------------
i Loxodonta_africana.GL010040.1                         I 1 I 16
s Lycaon_pictus.CM007556.1                               11097464  92 +  39895028 agtgtta---a-a---attattc---t--------ta-tt--aattAT--CAAAT-AGGCCCT-TGGCTCATT---TTA---ACGAAATGTTCCTATGATCCAAAGCTG-AAT-----------G---A----TAC--AGAC----AG------------------------------------------------------------------------------------------------------------
i Lycaon_pictus.CM007556.1                              C 0 I 38
s Macaca_arctoides.k141_2201161                             25708 135 +     74745 AGTGTCA---A-A---ATTAC-C---T--------CA-TT--ACTGAT--CAAAT-AAGCTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTTA-GAA-----------G---A----CAA--AGAC----AGA----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12712171 135 +  12821369 AGTGTCA---A-A---ATTAC-C---T--------CA-TT--ACTGAT--CAAAT-AAGCTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTTA-GAA-----------G---A----CAA--AGAC----AGA----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                4744 135 -     26467 AGTGTCA---A-A---ATTAC-C---T--------CA-TT--ACTGAT--CAAAT-AAGCTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTTA-GAA-----------G---A----CAA--AGAC----AGA----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           52615 135 +     63263 AGTGTCA---A-A---ATTAC-C---T--------CA-TT--ACTGAT--CAAAT-AAGCTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTTA-GAA-----------G---A----CAA--AGAC----AGA----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 4725 135 -     26361 AGTGTCA---A-A---ATTAC-C---T--------CA-TT--ACTGAT--CAAAT-AAGCTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTTA-GAA-----------G---A----CAA--AGAC----AGA----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_2667654                                1028 135 -      5626 AGTGTCA---A-A---ATTAC-C---T--------CA-TT--ACTGAT--CAAAT-AAGCTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTTA-GAA-----------G---A----CAA--AGAC----AGA----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Macaca_leonina.k141_2667654                           C 0 C 0
s Macaca_maura.k141_251854                                  51144 135 -     79256 AGTGTCA---A-A---ATTAC-C---T--------CA-TT--ACTGAT--CAAAT-AAGCTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTTA-GAA-----------G---A----CAA--AGAC----AGA----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196041242 135 + 196197964 AGTGTCA---A-A---ATTAC-C---T--------CA-TT--ACTGAT--CAAAT-AAGCTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTTA-GAA-----------G---A----CAA--AGAC----AGA----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11451412 135 +  11645122 AGTGTCA---A-A---ATTAC-C---T--------CA-TT--ACTGAT--CAAAT-AAGCTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTTA-GAA-----------G---A----CAA--AGAC----AGA----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                  10098 135 -     46448 AGTGTCA---A-A---ATTAC-C---T--------CA-TT--ACTGAT--CAAAT-AAGCTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTTA-GAA-----------G---A----CAA--AGAC----AGA----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                7760 135 -     13212 AGTGTCA---A-A---ATTAC-C---T--------CA-TT--ACTGAC--CAAAT-AAGCTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTTA-GAA-----------G---A----CAA--AGAC----AGA----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 21441 135 -     55006 AGTGTCA---A-A---ATTAC-C---T--------CA-TT--ACTGAT--CAAAT-AAGCTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTTA-GAA-----------G---A----CAA--AGAC----AGA----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43846863 135 +  43892939 AGTGTCA---A-A---ATTAC-C---T--------CA-TT--ACTGAT--CAAAT-AAGCTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTTA-GAA-----------G---A----CAA--AGAC----AGA----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               22726 135 -     24607 AGTGTCA---A-A---ATTAC-C---T--------CA-TT--ACTGAT--CAAAT-AAGCTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTTA-GAA-----------G---A----CAA--AGAC----AGA----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                              10095 135 -     27140 AGTGTCA---A-A---ATTAC-C---T--------CA-TT--ACTGAT--CAAAT-AAGCTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTTA-GAA-----------G---A----CAA--AGAC----AGA----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                704170 129 +    802869 AGTGTTA---A-A---A---TTA---T--------CA-TT--AATTAT--CAAAT-AGACCCT-TGGCTCATT---AAA---ATGAGATGTTCCTGTGATCTAAAGTAG-AAA-----------G---A----TAA--A--------GA----T-T--T-AG---AAAT-------CT-TCA-----------ATCCTT------T-GG---A-A----AA--TCA------------GAAGTTCTA----GTG-A
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 I 7
s Mandrillus_leucophaeus.scaffold125                     43443128 135 -  43563597 AGTGTCA---A-A---ATTAC-C---T--------CA-TT--ACTGAT--CAAAT-AAGCTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-GAA-----------G---A----CAA--AGAC----AGA----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4455927 135 -   4543643 AGTGTCA---A-A---ATTAC-C---T--------CA-TT--ACTGAT--CAAAT-AAGCTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-GAA-----------G---A----CAA--AGAC----AGA----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            154467 120 +    252755 --------------------------T--------CA-AT--AATTAT--CGAAT-AGGCGCT-TGGCTTATT---ATA---ATGAGATATTCCTATGATCCAAAGTTG-ACA-----------G---A----TAT--AGAC----AGA----C-T--T-AG---GAAT-------CT-TCA-----------ATCCCT------T-GG---A-A----AA--TCA------------GCAGTTCTA----TTC-A
i Manis_javanica.JSZB01003966.1                         I 13 I 23
s Manis_pentadactyla.KN017078.1                             42066 120 +     58827 --------------------------T--------CA-AT--AATTAT--CGAAT-AGGCGCT-TGGCTTATT---ATA---ATGAGATATTCCTATGATCCAAAGTTG-ACA-----------G---A----TGT--AGAC----AGA----C-T--T-AG---GAAT-------CT-TCA-----------ATCCCT------T-GG---A-A----AA--TTA------------GCAGTTCTA----ATC-A
i Manis_pentadactyla.KN017078.1                         I 14 I 23
s Marmota_marmota.CZRN01000005.1                         36879707 135 +  64221397 AGTGTTA---A-A---ATGAC-C---T--------CA-TT--AATGAT--CAAAC-AGGACTT-TGATTCATT---GTA---ATGAGATGTTCCTAAGaaccaaatttt-aaa-----------t---a----taa--agac----aga----t-T--T-AG---GGAT-------CT-TCA-----------ATTCTT------G-GG---A-A----AA--TCA------------GCAGTTCTA----ATC-A
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       67969 136 -    234502 CATGTTA---A-A---ATT---A---TCAT-----CA-TC--AATTAT--CAAAA-AGGCCCT-TGGCTCATT---AGA---ATGAGATGTTCCTATGATCCAAAGTTG-AAA-----------G---ACAGAGAC--A--------GA----T-T--T-AG---GAAG-------TT-GCC-----------ATCTTT------T-GG---A-A----AA--TCA------------GCAGTTTGC----ATA-G
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             8858 141 -     87323 -ATGTTA---A-A---ATTATTC---T--------CA-CT--AATTAT--CAAAT-AGGCCC--TGGTTCATT---ATA---ATGAGATGTTCCTATGATCCAAAGTTG-AAT-----------G---A----TAT--AGAG----AGA----C-T--T-GG---GAAT-------TT-T-AATCTTTTGTTAATCTTT------T-GG---A-A----AA--T---------------AAGTTCTA----ATA-A
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 3670 135 +    115071 AGTGTGA---A-A---GTGAC-C---T--------CA-TT--AATGAT--GAAAT-AGGCCTT-TGACTCTTT---ATA---ATGAGATGTTTCTGTGAACCAAAATTG-AAA-----------G---A----GAA--AGAC----AGA----T-T--T-AG---GGAC-------CT-TCA-----------ATACTA------A-GA---A-A----AA--TCA------------GCAATTCTA----ATT-A
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1053307 136 -  26018355 AGTGTGA---A-A---GTGAC-C---T--------CA-TT--AATGAT--CAAAT-AGGCCTT-TGACTTTTC---ATA---ATGAGATAATTCTGTGAAGCAAAAttg-aaa-----------g---a----gaa--aggc----aga----t-t--t-aG---GGAC-------CT-TCA-----------ATACTT------A-GA---A-A----AA--TCA------------CCAAttcta----attag
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    4770 119 -     12939 --------------------------------------TT--AATTAT--CAAAT-AGGCCCT-TGGCTCATT---ATA---ATGAGAGGTTCCTATGATCCAAAGTTG-AAA-----------G---A----TAA--AGAC----AGA----T-C--T-AG----GCT-------CT-TCA-----------ATGTGT------G-G----A-A----AA--TCA------------GCAGTCCTAAATAATT-A
i Mesoplodon_bidens.MesBid_scaffold_96348               I 16 C 0
s Microcebus_murinus.CM007691.1                          16515933 136 +  47401472 AGTGTTA---A-A---ATTAG-C---T--------CA-TT--AATGAT--CAAAT-CGGCCTT-TGCCTCATT---ATA---ATGAGATGTTCTTATAAACCAAAGTTG-AAA-----------G---A----TAA--AGAT----AGA----T-T--T-AG---GAAT-------CT-TCA-----------ATCCTT------G-GA---A-A----AAA-TCA------------GCAGTCCTA----ATT-A
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  46979  74 -     48017 AGTGTTA---A-A---ATTAT-C---T--------TG-GT--AATGAT--CAAAA-AGGCCTT-TTTCTCCTA---ATA---ATGAGGTGATCCTGTGAACCTAAA------------------------------------------------------------------------------------------------------------------------------------------------------
i Microgale_talazaci.MicTal_scaffold_34660              I 1 I 70
s Micronycteris_hirsuta.MicHir_scaffold_37978               27113  77 -     32043 AGTGTTA---A-A---ATTATTA---T--------CA-TT--AATTAG--AAAAT-AGGCCTT-TGGCTCATT---A------TAAGATATCCCTATGATCCAATGTTG-AA------------------------------------------------------------------------------------------------------------------------------------------------
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 I 50
s Microtus_ochrogaster.CM001673.1                        22826272 135 -  98408828 AGTGTGA---A-A---GTGAC-C---T--------CA-TT--AATGAT--CAAAT-AGGCCTT-TAACTCGTT---ATA---ATGAGATCTTTCTGTGAAGcaaaattg-aaa-----------g---a----gaa--agac----aga----t-t--t-AG---GGAC-------CT-TCA-----------GTACTT------A-GA---A-A----AA--TCA------------CCAATTCTA----ATT-T
i Microtus_ochrogaster.CM001673.1                       C 0 I 13
s Miniopterus_natalensis.LDJU01000022.1                   8215481 136 +  10048721 AGTGTGA---A-A---ATTATTA---T--------CG-TT--AATTAT--CAAAT-AGGCCTT-TGGCTCATT---AGG---ATAAGATGTTCCTATGATCCAAAGTTG-AAA-----------G---A----TAA--AGGC----AGA----G-T--T-AG---GGAT-------CT-TTA-----------ATCCTT------T-GG---A-A----AA--TCA------------GCAGTTCTA----CTA-A
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            39940 136 +     45743 AGTGTGA---A-A---ATTATTA---T--------CG-TT--AATTAT--CAAAT-AGGCCTT-TGGCTCATT---AGG---ATAAGATGTTCCTATGATCCAAAGTTG-AAA-----------G---A----TAA--AGGC----AGA----G-T--T-AG---GGAT-------CT-TTA-----------ATCCTT------T-GG---A-A----AA--TCA------------GTAGTTCTA----CTA-A
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         7678 135 +     29742 AGTGTCA---A-A---ATTAC-C---T--------CA-TT--AATGAT--CAAAT-AAGCTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-GAA-----------G---A----CAA--AGAC----AGA----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        19615 132 -    104932 AGTGTTA---A-A---GTTATTC---T--------TA-CT--AATTAT--CAAAT-AGGCCCT-TGGTTCATT---ATA---ATGAGATGTTCCTATGATCCAAAGTTG-AAT-----------G---A----TAT--AGAC----AAA----C-T--T-GG---GAAT-------CT-T-A-----------ATCCTT------T-GG---A-A----AA--T---------------CAGTTCTA----ATA-A
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     6627 136 -     12809 AGTGTTA---A-A---ATTAG-C---T--------CA-TT--AATGAT--CAAAT-AGGCCTT-TGGCTCATT---ATA---ATGAGATGTTTTTATAAACCAAAGTTG-AAA-----------G---A----TAA--AGAT----AGA----T-T--T-AG---GAAT-------CT-TCA-----------ATCCTT------G-GA---A-A----AAA-TCA------------GTAGTCCTA----ATT-A
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 152545 119 +    154973 --------------------------------------TT--AATTAT--CAAAT-AGGCCCT-TGGCTCATT---ATA---ATGAGATGTTCCTATGATCCAAAGTTG-CAA-----------G---A----TAA--AGAC----AGA----T-C--T-AG----GAC-------CT-TCA-----------ATCTGT------G-G----A-A----AA--TCA------------GCAGTCCTGAATAATT-A
i Monodon_monoceros.MonMon_M_scaffold_5598              I 16 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                165711  50 +    265003 ------------------------------------------------------------------------------------------------------------------------------------------AGAC----AGA----T-T--G-AG---GGAC-------CT-TTA-----------ATCCTT------T-GG---A-A----AA--TCA------------GCAATTCTA----ATA-A
i Mormoops_blainvillei.MorMeg_scaffold_2952             I 75 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  9327 120 -     19904 ------------C---ATTAATATTAT--------CA-T------TAT--CCAGC-AGGCCCT-TAGCTCATT---ATA---AT-----GTTCCTATAATCCAAAATTG-AAA-----------G---A----AAA--CAAC----AGA----A-C--T-AG----GAT-------CT-CCA-----------ATCCTT------G-G----A-A----AA--TCA------------GTAATTCTA----ATT-A
i Moschus_moschiferus.MosMos_scaffold_78805             I 2 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  152671 128 -    168139 --TGTTA---A-A---ATAATTC---T--------CA-TT--AATTAT--CGAAT-AGGCCCT-TTGCTTATT---A------TGAGATATTCCTATGATCCAAAGTTG-AAC-----------A---A----TAT--AGAC----AGA----T-T--T-AA---GAAT-------CT-TCA-----------ATCCTT------T-GG---A-A----AA--T---------------GAGTACTA----ATT-A
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          26465 136 -    100666 AGTTTCA---A-A---ATTATTA---T--------CA-TT--AATTGT--CAAAT-AGGCCTT-TGGCTCATT---AGA---ATAGGATGCGCCTATGATCCAAAGTTG-ACA-----------G---T----TAA--AGAC----AGA----T-T--T-GG---GGCA-------CT-TTA-----------ATCCTT------T-GA---A-A----AA--TCA------------GCAGTTCTA----ATA-A
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70773555 132 +  92629107 AGTGTGA---A-A---GTGAC-C---T--------CA-TT--AATGAT--CAAAT-AG-CCTT-TGACTCTTT---ATG---ATAAGATGTTCCTGTGAACCAAAATTG-AAA-----------G---G----GAA--AGAC------A----A-A--C-GG---GGAC-------CT-TCA-----------ATTCTT------G-GA---A-A----AA--TCA------------GCAATTCta----att-a
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75495616 132 +  98207768 AGTGTGA---A-A---GTGAC-C---T--------CA-TT--AATGAT--CAAAT-AG-CCTT-TGACTCTTT---ATG---ATAAGATGTTTCTGTGAACCAAAATTG-AAA-----------G---G----GAA--AGAC------A----A-A--C-GG---GGAC-------CT-TCA-----------ATTCTT------A-GA---A-A----AA--TCA------------GCAATTCTa----att-a
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67562342 134 +  89017189 AGTGTGA---A-A---GTGAC-C---T--------CA-TT--AATGAA--CAAAT-AG-TCTT-TGACTCTTT---ATG---ATAAGATGTTCCTGTGAACCAAAATtg-aaa-----------g---g----gaa--agac----aga----a-a--c-ag---gaac-------CT-TCA-----------ATTCTT------A-GA---A-A----AA--TCA------------GCAATTcta----att-a
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74338324 133 +  97876770 AGTGTGA---A-A---GTGAC-C---T--------CA-TT--AATGAT--CAAAT-AG-CCTT-TGACTCTTT---ATG---ATAAGATGTTCCTGTGAACCAAAATTG-AAA-----------G---G----GAA--AGAC------A----A-A--C-GG---AGAC-------CT-TCA-----------ATTCTT------A-GA---AAA----AA--TCA------------GCAATtcta----att-a
i Mus_spretus.CM004110.1                                C 0 I 12
s Muscardinus_avellanarius.MusAve_scaffold_9643             16963 134 +     98495 aGTTTTC---A-G---ATGAC-C---C--------CA-TT--AATAAT--TAAAC-GGGCTTC-TGATGCATT---ATA---ATGAGATGTTCCTATAAACCAAAGTTG-AAA-----------G---A----TAT--AGAA----AGA----G-T--G-AT---GATA-------TT-TAA-----------ATCCTT------A-GA---A-A----AA--TCA------------GCA-TTCAA----ATT-A
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 226 C 0
s Mustela_putorius.JH417978.1                             4430961 128 -  28371801 -ATGTTA---A-A---ATTATTC---T--------CA-CT--AATTAT--CAAAT-AGGCCC--TGGTTCATC-----A---ATGAGATGTTCCTATGATCCAAAGTTG-AAT-----------G---A----TAT--AGAG----AGG----C-T--T-GG---GAAT-------TT-T-A-----------ATCTTT------T-GG---A-A----AA--T---------------CAGTTCTA----AAA-A
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     98039 135 -    117718 AATGCTA---A-A---ATGAT-C---T--------CA-TT--GGTGAT--CTAAT-ACACCT-TTGAATTATT---AGA---ATGAGATGATTATCTGAACCAAATTTT-TAA-----------A---A----TAT--AGAC----AGA----T-T--T-GT---AGAC-------AT-CCA-----------ATCCTT------A--G---AAA----AA--TCA------------ACAGTTCTA----ATT-A
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               973486 136 +   8389877 AGTGTCA---A-A---ATTATTG---T--------CA-TT--AATTAT--CAAAT-AGGCCTT-TGGCTCATT---AGA---ATAAGATGTGCCTATGATCCAAAGTTG-ACA-----------G---T----TAA--AGAC----AGA----T-T--T-GG---GGCA-------CT-TTA-----------ATCCTT------T-GA---A-A----AA--TCA------------GCAGTTCTA----ATA-A
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5024562 136 +   6462685 AGTGTCA---A-A---ATTATTG---T--------CA-TT--AATTAG--CAAAT-AGGCCTT-TGGCTCATT---AGA---ATAAGATGTGTCTATGATCCAGAGTTG-GCA-----------G---T----TAA--AGAC----AGA----T-T--T-GG---GGCA-------CT-CTA-----------ATCCTT------T-GA---A-A----AA--TCA------------GCAGTTCTA----ATA-A
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3470983 136 -   3747815 AGTGTCA---A-A---ATTATTG---T--------CA-TT--AATTAT--CAAAT-AGGCCTT-TGGCTCATT---AGA---ATAAGATGTGCCTATGATCCAAAGTTG-ACA-----------G---T----TAA--AGAC----AAA----T-T--T-TG---GGCA-------CT-TTA-----------ATCCTT------T-GA---A-A----AA--TCA------------GCAGTTCTA----ATA-A
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        16220 136 +     66751 ACTGTCA---A-A---ATTATTG---T--------CA-TT--AATTAT--CAAAT-AGGCCTT-TGGCTCATT---AGA---ATAAGATGTGCCTATGATCCAAAGTTG-ACA-----------G---T----TAA--AGAC----AGA----T-T--T-GG---GGCA-------CT-TTA-----------ATCCTT------T-GA---A-A----AA--TCA------------GCAGTTCTA----ATA-A
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_239326              535 139 +      2245 AGTGTTA---A-A---ATTGC-C---T--------CA-TT--AATGAT--CAAAA-AGATTCT-TGGCTCATT---ACA---GTAAGATGTTCCTATGAATCTAAGTTG-AAT-----------G---A----CAA--AGAC----AGG----T-T--T-AG---GGGC-------CT-TCA-----------ACCCTT------G-CT---G-ATATTTA--TCA------------GCCTTTCTA----TTT-A
i Myrmecophaga_tridactyla.MyrTri_scaffold_239326        I 58 I 160
s Nannospalax_galili.KL201303.1                            126022 135 +    362372 AGTGTTA---A-A---ATGAC-T---T--------CA-Tt--aatgat--caaat-aggcttt-tgACTCTTT---ATA---ATGAGATGTTTCTGTGAACCAAAATTG-AAC-----------G---A----TAA--GGAC----AGA----A-T--T-AG---GGAC-------CT-TCA-----------ATAATT------A-GA---A-A----AA--TCA------------GCAGTTCTA----ATT-G
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                              11939 135 +     48152 AGTGTCA---A-A---ATTAC-C---T--------CA-TT--AGTGAT--CAAAT-AAGTTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-AAA-----------G---A----CAA--AGAC----AGA----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4493006 132 -  14209539 AGTGTTA---A-A---GTTATTC---T--------TA-CT--AATTAT--CAAAT-AGGCCCT-TGCTTCATT---ATA---ATGAGATGTTCCTATGATCCAAAGTTG-AAT-----------G---A----TAT--AGAC----AAA----C-T--T-GG---GAAT-------CT-T-A-----------ATCCTT------T-GG---A-A----AA--T---------------CAGTTCTA----ATA-A
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3957136 119 -   4490290 --------------------------------------TT--AATTAT--CAAAT-AGGCCCT-TGGCTCATT---ATA---ATGAGATGTTCCTATGATCCAAAGTTG-CAA-----------G---A----TAA--AGAC----AGA----T-C--T-AG----GAC-------CT-TCA-----------ATCTGT------G-G----A-A----AA--TCA------------GCAGTCCTGAATAATT-A
i Neophocaena_asiaeorientalis.KZ688543.1                I 16 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  52947  77 +     94413 AGTGTTA---A-A---GTTATTA---T--------CA-TT--AATTAG--CAAAT-AGGCCTT-TCATTCATT---A------TAAGATGTTCCTATGATCCAATGTTG-AA------------------------------------------------------------------------------------------------------------------------------------------------
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 I 50
s Nomascus_annamensis.k141_881190                              46  85 -      2113 AGTGTCA---A-A---ATTAC-C---T--------CA-TT--AATGAT--CAGAT-AGGCTTT-TGGCTCATT---GTA---ATGAGATGTTCCTATCAACCAAAGTTG-AAA-----------G---A----CAA------------------------------------------------------------------------------------------------------------------------
i Nomascus_annamensis.k141_881190                       C 0 I 50
s Nomascus_concolor.k141_256540                              8347  85 -      8966 AGTGTCA---A-A---ATTAC-C---T--------CA-TT--AATGGT--CACAT-AGGCTTT-TGGCTCATT---GTA---ATGAGATGTTCCTATCAACCAAAGTTG-AAA-----------G---A----CAA------------------------------------------------------------------------------------------------------------------------
i Nomascus_concolor.k141_256540                         C 0 I 46
s Nomascus_gabriellae.k141_202556                             109  85 -      1580 AGTGTCA---A-A---ATTAC-C---T--------CA-TT--AATGGT--CACAT-AGGCTTT-TGGCTCATT---GTA---ATGAGATGTTCCTATCAACCAAAGTTG-AAA-----------G---A----CAA------------------------------------------------------------------------------------------------------------------------
i Nomascus_gabriellae.k141_202556                       C 0 I 46
s Nomascus_siki_b.tarseq_718                            13035  85 +     17550 AGTGTCA---A-A---ATTAC-C---T--------CA-TT--AATGAT--CACAT-AGGCTTT-TGGCTCATT---GTA---ATGAGATGTTCCTATCAACCAAAGTTG-AAA-----------G---A----CAA------------------------------------------------------------------------------------------------------------------------
i Nomascus_siki_b.tarseq_718                        I 528 I 3505
s Nomascus_siki_a.k141_421408                                  2202  85 +     16235 AGTGTCA---A-A---ATTAC-C---T--------CA-TT--AATGAT--CACAT-AGGCTTT-TGGCTCATT---GTA---ATGAGATGTTCCTATCAACCAAAGTTG-AAA-----------G---A----CAA------------------------------------------------------------------------------------------------------------------------
i Nomascus_siki_a.k141_421408                             C 0 I 46
s Nyctereutes_procyonoides.CAJHUB010000786.1                40339 132 +   3668941 agtgtta---a-a---attattc---t--------ta-tt--aattAT--CAAAT-AGGCCCT-TGGCTCATT---TTA---ACGAAATGTTCCTATGATCCAAAGCTG-AAT-----------G---A----TAC--AGAC----AGA----G-T--T-GG---GAAT-------CT-G-A-----------ATCCTT------T-GG---A-A----AA--T---------------CAATTCTA----ATA-A
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65573519 134 -  95554990 AGTGTTA---A-T---ATTAG-T---T--------CA-TT--AATGAT--CAAAT-AGGCCTT-TGGCTCATT---AT----ATGAGATGTTTCTATATACCAAAATTG-AAA-----------G---A----TAA--AGAT----AGA----T-T--T-AG---GGAT-------CT-TCA-----------ATCCTT------G-GA---A-A----AA--TCA------------GCAGTCCTA----ATT-A
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_6040852                            1155 134 +      1868 AGTGTTA---A-T---ATTAG-T---T--------CA-TT--AATGAT--CAAAT-AGGCCTT-TGGCTCATT---AT----ATGAGATGTTTCTATATACCAAAATTG-AAA-----------G---A----TAA--AGAT----AGA----T-T--T-AG---GGAT-------CT-TCA-----------ATCCTT------G-GA---A-A----AA--TCA------------GCAGTCCTA----ATT-A
i Nycticebus_coucang.k141_6040852                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65681701 134 +  89412551 AGTGTTA---A-T---ATTAG-T---T--------CA-TT--AATGAT--CAAGT-AGGCCTT-TGGCTCATT---AT----ATGAGATGTTTCTATATACCAAAATTG-AAA-----------G---A----TAA--AGAT----AGA----T-T--T-AG---GGAT-------CT-TCA-----------ATCCTT------G-GA---A-A----AA--TCA------------GCAGTCCTA----ATT-A
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            5001547 135 -  23139505 AGTGGTA---A-A---ATTAC-A---T--------CA-TT--AATGAT--CAAAT-AGGTCTT-TGGATCTTT---ATA---ATACGATATTCTTATCAGCCTGTGTTG-AAA-----------A---C----TAA--AGAC----AGA----T-T--T-AG---GGTT-------CT-TCA-----------GTCCTT------G-GA---A-A----AA--TCA------------GCAGTTCTA----TAT-G
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3693182 133 +  10294119 AATGTTA---A-A---ATGAC-C---T--------CA-CT--AGTGAT--CTAAT-ACACCT--TGACTTATT---ATA---ATGAGATAGTTCTttgaatcaaattta-aaa-----------a---a----tat--agac----aga----T-T--T-GG---GGAC-------AT-TCA-----------ATCCTT------G--G---A-A----AA--TCA------------ACAGTTCTA----AGT-A
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             687256 132 -   3126709 AGTGTTA---A-A---ATTATTC---T--------CA-CT--AATTAT--CAAAT-AGGCCCT-TGGTTCATT---ATA---ATGAGATGTTCCTATGATTCAAAGTCG-AAT-----------G---A----TAT--AGAC----AAA----C-T--T-GA---GAAT-------CT-T-A-----------ATCCTT------T-GG---A-A----AA--T---------------CAGTTCTA----ATA-A
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1086320 117 +   1425656 ------------C---ATTAATA---T--------CA-T------TAT--CTTGC-AGGCACT-TAGCTCATT---ATT---AT-----GTTCCTATAatccaaaatta-aaa-----------g---a----aaa--caac----aga----c-c--T-AG----GAT-------CT-CCA-----------ATCCTT------G-G----A-A----AA--TCA------------GCAGTTCTA----ATT-A
i Odocoileus_virginianus.KZ101650.1                     I 2 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         44389 120 +     78940 ------------C---ATTAACATTAT--------CA-T------TAT--CCAGC-AGGCCCT-TAGCTCATT---ATA---AT-----GTTCCTATAATccaaaattg-aaa-----------g---a----aaa--caac----aga----c-c--T-AG----GAT-------CT-CCA-----------ATCCTT------G-G----A-A----AA--TCA------------GCAGTTCTA----ATT-A
i Okapia_johnstoni.LVCL01S0017931.1                     I 2 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  132078 135 +    145789 AGTGTGA---A-A---GTGAC-C---T--------CA-TT--AATGAT--CAAAT-AGGCCTT-TGACTCTTT---ATA---ATGAGATCTTTCTGTGAAGCAAAATTG-AAA-----------G---A----GAA--AGAC----AGA----T-T--T-AG---GGGC-------CT-TCA-----------GTACTT------A-GA---A-A----AA--TCA------------CCAGTTCTA----ATT-A
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  45020 135 +     62360 AATGTGA---A-A---GTGAC-C---T--------CA-TT--AATGAT--CAAAT-AGGCCTT-TGACTCTTT---ATA---ATGAGATGTTTCTGTGAAGCAAAATTG-AAA-----------G---A----GAA--AGAC----ACA----T-T--T-AG---GGAC-------CT-TCA-----------ATATTT------A-GA---A-A----AA--TCA------------TCAATTCTA----ATT-A
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7230810 119 -   7562323 --------------------------------------CT--AATTAT--CATAT-AGGCCCT-TGGCTCATT---ATA---ATGGGATGTTCCTATGATCCAAAGTTG-CAA-----------G---A----TAA--AGAC----AGA----T-C--T-AG----GAT-------CT-TCA-----------ATCTGT------G-G----A-A----AA--TCA------------GCAGTCCTGAATAATT-A
i Orcinus_orca.KB316965.1                               I 16 C 0
s Orycteropus_afer.OryAfe_flattened_line_371885              2011 136 +      3658 AGTCCTA---A-G---ATTAC-C---T--------CA-TT--AATGAT--CAAAA-AGTCCCT-TCTCTCATT---ATA---ATGAGTTGCTTCTATGAACCTAAACTG-AAA-----------G---A----TAA--ATGC----AGA----T-T--T-AA---AGAT-------CT-TCA-----------ATCCTT------G-GAG--A-A----AA--CTG------------GTAGCTATT----AAT-A
i Orycteropus_afer.OryAfe_flattened_line_371885         I 1 C 0
s Oryctolagus_cuniculus.CM000803.1                      141885515 114 + 163896628 ----------------ATTAT-A---T--------CA-TT--AATAAT--CAAAT-AGGTCTT-TGActcattataata---ataaaatgttcctATGAagctaaa-tggaaa-----------a---a----taa--acag----aga----t-t--T-AG---GGAA-------CT-TCA-----------ATCCTT------G-GG---A-A----AA--T--------------------------------
i Oryctolagus_cuniculus.CM000803.1                      I 8 I 8
s Otocyon_megalotis.JAEUCK010005121.1                      317471 132 -    505867 agtgtta---a-a---attattc---t--------ta-tt--aattaT--CAAAT-AGGCCCT-TGGCTCATT---TTA---ACGAAATGTTCCTATGATCCAAAGCTG-AAT-----------G---A----TAC--AGAC----AGA----G-T--T-GG---GAAT-------CT-G-A-----------ATCCTT------T-GG---A-A----AA--T---------------CAATTCTA----ATA-A
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        6647 135 -     53940 AGTGTTA---A-T---ATTAG-C---T--------CA-TT--AATGAT--CAAAT-AGGCCTT-CAGCTCATT---ATA---ATGTGATGTTTCTATATACCAAAGTTG-AAA-----------G---A----TAA--AGAT----AGA----T-T--T-AG---GGAT-------CT-TCA-----------ATCCTT------G-GA---A-A----AA--TCA------------GCAGTCCTA----ATT-A
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18014612 135 -  38779656 AGTGTTA---A-T---ATTAG-C---T--------CA-TT--AATGAT--CAAAT-AGGCCTT-CAGCTCATT---ATA---ATGAGATGTTTCTATATACCAAAGTTG-AAA-----------G---A----TAA--AGAT----AGA----T-T--T-AG---GGAT-------CT-TCA-----------ATCCTT------G-GA---A-A----AA--TCA------------GCAGTCCTA----ATT-A
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134085543 109 - 275406953 --------------------------T--------CA-T------TAT--CCAGC-AGGCCCT-TAGCTCATT---ATA---AT-----GTTCCTATAATccaaaattg-aaa-----------g---a----aaa--caac----aga----c-c--T-AG----GAT-------CT-CCA-----------ATCCTT------G-G----A-A----AA--TCA------------GCAGTTTTA----ATT-A
i Ovis_aries.CM001582.2                                 I 7 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      86784 120 +    140051 ------------C---ATTAATATTAT--------TA-T------TAT--CCAGC-AGGCCCT-TAGCTCATT---ATA---AT-----GTTCCTATAATCCAAAATTG-AAA-----------G---A----AAA--CAAC----AGA----C-C--T-AG----GAT-------CT-CCA-----------ATCCTT------G-G----G-A----AA--TCA------------GCAGTTTTA----ATT-A
i Ovis_canadensis.OviCan_scaffold_6251                  I 2 C 0
s Pan_paniscus.CM003386.1                               127580020 135 - 205426864 AGTGTCA---A-A---TTTAC-C---T--------CA-TT--AATGAT--CAGAT-AGGCTTT-TGGCTCATT---GTA---ATTAGATGTTCCTATAAACCAAAgttg-aaa-----------g---a----caa--agac----agg----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GT---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120157181 135 - 196562556 AGTGTCA---A-A---TTTAC-C---T--------CA-TT--AATGAT--CAGAT-AGgcttt-tggctcact---gta---attaGATGTTCCTATAAACCAAAGTTG-AAA-----------G---A----CAA--AGAC----AGG----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GT---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  42232 133 +    295523 AGTGTTA---A-A---TTTATTC---T--------CA-TT--AATTAT--CAAAT-AGGCCCT-TGGCTTATT---ATA---ATGAGATGTTCCTATGATCCAAAGTTG-AAC-----------A---A----TAT--AGAC----AGA----T-T--T-AA---GAAT-------CT-TCA-----------ATTCTT------T-GG---A-A----AA--T---------------CAGGGATA----ATA-A
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3646046 133 +  18214204 AGTGTTA---A-A---TTTATTC---T--------CA-TT--AATTAT--CAAAT-AGGCCCT-TGGCTTATT---ATA---ATGAGATGTTCCTATGATCCAAAGTTG-AAC-----------A---A----TAT--AGAC----AGA----T-T--T-AA---GAAT-------CT-TCA-----------ATTCTT------T-GG---A-A----AA--T---------------CAGGGATA----ATA-A
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5035683 133 -   6340057 AGTGTTA---A-A---TTTATTC---T--------CA-TT--AATTAT--CAAAT-AGGCCCT-TGGCTTATT---ATA---ATGAGATGTTCCTATGATCCAAAGTTG-AAC-----------A---A----TAT--AGAC----AGA----T-T--T-AA---GAAT-------CT-TCA-----------ATTCTT------T-GG---A-A----AA--T---------------CAGGGATA----ATA-A
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1074423 120 -   1292953 ------------C---ATTAATATTAT--------CA-T------TAT--CCAGC-AGGCCCT-TAGCTCATT---ATA---AT-----GTTCCTATAATccaaaattg-aaa-----------g---a----aaa--caac----aga----c-c--T-AG----GAT-------CT-CCA-----------ATCCTT------G-G----A-A----AA--TCA------------GCAGTTTTA----ATT-A
i Pantholops_hodgsonii.KE114631.1                       I 2 C 0
s Papio_anubis.CM001492.2                               188161920 135 - 188283584 AGTGTCA---A-A---ATTAC-C---T--------CA-TT--GCTGAT--CAAAT-AAGCTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-GAA-----------G---A----CAA--AGAC----AGA----G-G--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              5010 135 +     25005 AGTGTCA---A-A---ATTAC-C---T--------CA-TT--ACTGAT--CAAAT-AAGCTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-GAA-----------G---A----CAA--AGAC----AGA----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47519292 135 +  47705337 AGTGTCA---A-A---ATTAC-C---T--------CA-TT--GCTGAT--CAAAT-AAGCTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-GAA-----------G---A----CAA--AGAC----AGA----G-G--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 73283 137 -    104429 AGTGTCA---A-A---ATTAC-C---T--------CA-TT--ACTGAT--CAAAT-AAGCTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-GAA-----------G---A----CAA--AGAC----AGA----G-TCCT-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   11815 135 +     14967 AGTGTCA---A-A---ATTAC-C---T--------CA-TT--GCTGAT--CAAAT-AAGCTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-GAA-----------G---A----CAA--AGAC----AGA----G-G--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_899489                                   485 135 -     13896 AGTGTCA---A-A---ATTAC-C---T--------CA-TT--ACTGAT--CAAAT-AAGCTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-GAA-----------G---A----CAA--AGAC----AGA----G-G--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Papio_ursinus.k141_899489                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    123698 133 -    135482 ATTGCTA---A-A---ATTATTC---T--------CA-TT--TATTAT--CAAAC-AGGCCTT-TGGCTTATT---ATA---ATGAGATATTCCTATGATCCAAGGTTG-AAC-----------G---A----TAT--AGAC----AGG----T-T--T-AA---AAAT-------CT-TCA-----------ATCCTT------C-GG---A-A----AA--T---------------CAGTTATA----ATA-A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          12302 135 -     23713 AGTGTTA---A-T---ATTAG-T---T--------CA-TT--AATGAT--CAAAT-ACGCCTT-TGGCTCATT---ATA---ATGAGATGTTTCTATATACCAAAATTG-AAA-----------G---A----TAA--AGAT----AGA----T-T--T-AG---GGAT-------CT-TCA-----------ATCCTT------G-GA---A-A----AA--CCA------------GCAGTCCTA----ATT-A
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           13453 135 +     61070 AGTGTTA---A-T---ATTAG-C---T--------CA-TT--AATGAT--CAAAT-ACGCCTT-TGGCTCATT---ATA---ATGAGATGTTTCCATATACCAAAATTG-AAA-----------G---A----TAA--AGAT----AGA----T-T--T-AG---GGAT-------CT-TCA-----------ATCCTT------G-GA---A-A----AA--TCA------------GCAGTCCTA----ATT-A
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       3729 138 +     49596 -GTGTTA---G-T---CTGAA-C---T--------CG-TT--AATGAT--CAAAG-AGGCTTT-GGACTTAAA---ATA---TTGAACTCTTCCTATAATCCAAAACTG-ATA-----------A--AA----AAA--AGAT----AGA----T-T--T-AA---AGAT-------CT-TCA-----------ATTTTT------A-GCAGGGAG----CA--TC-------------ATAGTTCTA----TTT-A
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 I 21
s Peromyscus_maniculatus.KI615458.1                       2840834 135 -   3366660 AATGTGA---A-A---GTGAC-C---T--------CA-TT--AATGAT--CAAAT-AGGCCTT-TGACTCTTT---ATA---ATGAGATGTTTCTGTGAAGcaaaattg-aaa-----------g---a----gaa--agac----aga----t-t--t-AG---GGAC-------CT-TCA-----------ATACTT------A-GA---A-A----AA--TCA------------TCAATTCTA----ATT-A
i Peromyscus_maniculatus.KI615458.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    19589 135 -     36578 TATGTTA---A-A---ATGAC-C---T--------CA-TT--AATCAT--AAAAT-AGTCCTT-TGACTCATT---ATA---ATGAGATGCCTCTATGAACCTAAGTTG-AAA-----------A---A----TAA--AGAC----AGA----T-T--T-GG---GAAT-------AT-TAA-----------AATCAT------A-AA---A-T----AA--ACA------------ATAACTCTA----ATT-T
i Petromus_typicus.PetTyp_scaffold_33007                C 0 I 22
s Phocoena_phocoena.PhoPho_flattened_line_53071              5273 116 +      8220 --------------------------------------TT--AATTAT--CAAAT-AGGCCCT-TGGCTCATT---A------TGAGATGTTCCTATGATCCAAAGTTG-CAA-----------G---A----TAA--AGAC----AGA----T-C--T-AG----GAC-------CT-TCA-----------ATCTGT------G-G----A-A----AA--TCA------------GCAGTCCTGAATAATT-A
i Phocoena_phocoena.PhoPho_flattened_line_53071         I 16 C 0
s Piliocolobus_badius.k141_1987485                           5479  82 -      5908 AGTGTCA---A-A---ATTAC-C---T--------CA-TT--AGTGAT--CAAAT-AAGTTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-AAA-----------G---A-------------------------------------------------------------------------------------------------------------------------------
i Piliocolobus_badius.k141_1987485                      C 0 I 47
s Piliocolobus_gordonorum.k141_1270531                       6098  82 -     17985 AGTGTCA---A-A---ATTAC-C---T--------CA-TT--AGTGAT--CAAAT-AAGTTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-AAA-----------G---A-------------------------------------------------------------------------------------------------------------------------------
i Piliocolobus_gordonorum.k141_1270531                  C 0 I 47
s Piliocolobus_kirkii.k141_929665                            5465  82 +      7694 AGTGTCA---A-A---ATTAC-C---T--------CA-TT--AGTGAT--CAAAT-AAGTTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-AAA-----------G---A-------------------------------------------------------------------------------------------------------------------------------
i Piliocolobus_kirkii.k141_929665                       C 0 I 47
s Piliocolobus_tephrosceles.PDMG02000036.1               26743948  82 +  26888534 AGTGTCA---A-A---ATTAC-C---T--------CA-TT--AGTGAT--CAAAT-AAGTTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGttg-aaa-----------g---a-------------------------------------------------------------------------------------------------------------------------------
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 I 47
s Pipistrellus_pipistrellus.PipPip_scaffold_3306           101716 136 +    112873 AGTGTCA---A-A---ATTATTA---T--------TA-TT--AATTAT--CAAAT-AGATCTT-TGGATCATT---AGA---ATACGATGATCCTATGATCCAAAGTTG-ACA-----------G---T----TAA--AGAC----TTA----T-T--T-TG---AGGA-------CT-TTA-----------ATACTT------T-GA---A-A----AT--TCA------------GTAGTTCTA----ATA-A
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             45662 113 -     61926 --------------------------------------------tgat--caaat-aggattC-TGGCTCTTT---GCA---ATGAGATGTTCCTATAAACCAAAGTTG-AAA-----------G---A----TGA--AGAC----AGA----T-T--T-GG---GGAT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TGT-A
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        27038 113 +     78826 --------------------------------------------tgat--caaat-aggattC-TGGCTCTTT---GCA---ATGAGATATTCCTATAAACCAAAGTTG-AAA-----------G---A----TGA--AGAC----AGA----T-T--T-GG---GGAT-------CT-TTA-----------CTTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TGT-A
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                             11093 113 -     15800 --------------------------------------------tgAT--CAAAT-AGGATTC-TGGCTCTTT---GCA---ATGAGATGTTCCTATAAACCAAAGTTG-AAA-----------G---A----TGA--AGAC----AGA----T-T--T-GG---GGAT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TGT-A
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        14292 113 -     16101 --------------------------------------------tgAT--CAAAT-AGGATTC-TGGCTCTTT---GCA---ATGAGATGTTCCTATAAACCAAAGTTG-AAA-----------G---A----TGA--AGAC----AGA----T-T--T-GG---GGAT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TGT-A
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          7521 113 +      9673 --------------------------------------------tgAT--CAAAT-AGGATTC-TGGCTCTTT---GCA---ATGAGATGTTCCTATAAACCAAAGTTG-AAA-----------G---A----TGA--AGAC----AGA----T-T--T-GG---GGAT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TAA------------GTAGCTCTA----TGT-A
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13476514 113 -  19735023 --------------------------------------------tgat--caaat-aggattC-TGGCTCTTT---GCA---ATGAGATATTCCTATAAACCAAAGTTG-AAA-----------G---A----TGA--AGAC----AGA----T-T--T-GG---GGAT-------CT-TTA-----------CTTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TGT-A
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           15424 113 -     31692 --------------------------------------------tgAT--CAAAT-AGGATTC-TGGCTCTTT---GCA---ATGAGATGTTCCTATAAACCAAAGTTG-AAA-----------G---A----TGA--AGAC----AGA----T-T--T-GG---GGAT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TGT-A
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990          11778 119 +     21690 --------------------------------------TT--AATTAT--CAAAT-AGGCCCT-TGGCTCATT---ATA---ATGTGATGTTCCTATGATCCAAAGTTG-AAA-----------G---A----CAA--AGAC----AGA----T-C--T-AG----GAT-------CT-TCA-----------ATCTGT------G-G----A-A----AA--TCA------------GCAGTCCTAAATAATT-A
i Platanista_gangetica.PlaMin_flattened_line_72990      I 16 C 0
s Plecturocebus_bernhardi.k141_959214                       27578 135 +     44506 AGTGCTA---A-A---ACTAC-C---T--------CA-TT--AATGAT--CAAAT-AGGATTT-TGGCTCTTT---GCA---ATGAGATGTTCCTACAAACCAAAGTTG-AAA-----------G---A----TGA--AGAC----AGA----T-T--T-GG---GGAT-------CT-TTA-----------ATTCTT------T-GA---A-A----AA--TCA------------GTAGTTCTA----TTT-A
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        27791 135 +     67491 AGTGCTA---A-A---ACTAC-C---T--------CA-TT--AATGAT--CAAAT-AGGATTT-TGGCTCTTT---GCA---ATGAGATGTTCCTACAAACCAAAGTTG-AAA-----------G---A----TGA--AGAC----AGA----T-T--T-GG---GGAT-------CT-TTA-----------ATTCTT------T-GA---A-A----AA--TCA------------GTAGTTCTA----TTT-A
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      18030 135 -     98129 AGTGCTA---A-A---ACTAC-C---T--------CA-TT--AATGAT--CAAAT-AGGATTT-TGGCTCTTT---GCA---ATGAGATGTTCCTACAAACCAAAGTTG-AAA-----------G---A----TGA--AGAC----AGA----T-T--T-GG---GGAT-------CT-TTA-----------ATTCTT------T-GA---A-A----AA--TCA------------GTAGTTCTA----TTT-A
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     27631 135 +    147771 AGTGCTA---A-A---ACTAC-C---T--------CA-TT--AATGAT--CAAAT-AGGATTT-TGGCTCTTT---GCA---ATGAGATGTTCCTACAAACCAAAGTTG-AAA-----------G---A----TGA--AGAC----AGA----T-T--T-GG---GGAT-------CT-TTA-----------ATTCTT------T-GA---A-A----AA--TCA------------GTAGTTCTA----TTT-A
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         4266 135 -     43940 AGTGCTA---A-A---ACTAC-C---T--------CA-TT--AATGAT--CAAAT-AGGATTT-TGGCTCTTT---GCA---ATGAGATGTTCCTACAAACCAAAGTTG-AAA-----------G---A----TGA--AGAC----AGA----T-T--T-GG---GGAT-------CT-TTA-----------ATTCTT------T-GA---A-A----AA--TCA------------GTAGTTCTA----TTT-A
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          8349 135 -     55515 AGTGCTA---A-A---ACTAC-C---T--------CA-TT--AATGAT--CAAAT-AGGATTT-TGGCTCTTT---GCA---ATGAGATGTTCCTACAAACCAAAGTTG-AAA-----------G---A----TGA--AGAC----AGA----T-T--T-GG---GGAT-------CT-TTA-----------ATTCTT------T-GA---A-A----AA--TCA------------GTAGTTCTA----TTT-A
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         27703 135 +    152463 AGTGCTA---A-A---ACTAC-C---T--------CA-TT--AATGAT--CAAAT-AGGATTT-TGGCTCTTT---GCA---ATGAGATGTTCCTACAAACCAAAGTTG-AAA-----------G---A----TGA--AGAC----AGA----T-T--T-GG---GGAT-------CT-TTA-----------ATTCTT------T-GA---A-A----AA--TCA------------GTAGTTCTA----TTT-A
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       5507 135 -    119457 AGTGCTA---A-A---ACTAC-C---T--------CA-TT--AATGAT--CAAAT-AGGATTT-TGGCTCTTT---GCA---ATGAGATGTTCCTACAAACCAAAGTTG-AAA-----------G---A----TGA--AGAC----AGA----T-T--T-GG---GGAT-------CT-TTA-----------ATTCTT------T-GA---A-A----AA--TCA------------GTAGTTCTA----TTT-A
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         17425 135 +    134592 AGTGCTA---A-A---ACTAC-C---T--------CA-TT--AATGAT--CAAAT-AGGATTT-TGGCTCTTT---GCA---ATGAGATGTTCCTACAAACCAAAGTTG-AAA-----------G---A----TGA--AGAC----AGA----T-T--T-GG---GGAT-------CT-TTA-----------ATTCTT------T-GA---A-A----AA--TCA------------GTAGTTCTA----TTT-A
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          28013 135 -     75465 AGTGCTA---A-A---ACTAC-C---T--------CA-TT--AATGAT--CAAAT-AGGATTT-TGGCTCTTT---GCA---ATGAGATGTTCCTACAAACCAAAGTTG-AAA-----------G---A----TGA--AGAC----AGA----T-T--T-GG---GGAT-------CT-TTA-----------ATTCTT------T-GA---A-A----AA--TCA------------GTAGTTCTA----TTT-A
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              192652  85 -    373494 AGTGTCA---A-A---ATTAC-C---T--------CA-TT--AATGAT--CAGAT-AGGCTTT-TGGCTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-AAA-----------G---A----CAA------------------------------------------------------------------------------------------------------------------------
i Pongo_abelii.NDHI03003816.1                           C 0 I 46
s Pongo_pygmaeus.ctg62                                   19813301 135 +  19899266 AGTGTCA---A-A---ATTAC-C---T--------CA-TT--AATGAT--CAGAT-AGGCTTT-TGGCTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-AAA-----------G---A----CAA--AGAC----AGA----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GT---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               9221 135 -     15069 CGTGTCA---A-A---ATTAC-C---T--------CA-TT--AGTGAT--CAAAT-AAGTTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-AAA-----------G---A----CAA--AGAC----AGA----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              9336 135 +     14865 CGTGTCA---A-A---ATTAC-C---T--------CA-TT--AGTGAT--TAAAT-AAGTTTT-TGGTTCATT---GTA---ATGAGATGTTCTTATAAACCAAAGTTG-AAA-----------G---A----CAA--AGAC----AGA----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                6339 135 -      9567 AGTGTTA---A-A---ATGAC-C---T--------TA-TA--AATGAT--CAAAA-AGATCCT-TATCTCACT---ATA---ATGAGATGCATCTATGAACCTCGGTTG-AAA-----------G---A----TAA--ATGC----AGA----T-C--T-AG---AGAT-------CT-TCA-----------ATCCTT------G-GA---A-A----AC--ATG------------ACAGTTCTA----ATT-A
i Procavia_capensis.ProCapCap_scaffold_149274           I 1 C 0
s Prolemur_simus.MPIZ01000048.1                           6854267 138 +  12164890 AGTGTTA---A-A---ATTAG-C---T--------CA-TT--AATGAT--CAAAT-AGACCTT-TGGCTCATT---ATA---ATGAGATGTTCCTATAAACCAAAgttg-aaa-----------g---a----caaagagat----agA----T-T--T-AG---GAAT-------CT-TCA-----------ATcctt------a-ga---a-a----aa-atta------------gcagtcCTA----ATT-A
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    673843 136 -   2312742 AGTGTTA---A-A---ATTAG-C---T--------CG-TT--AATGAT--TAAAT-AGACCTT-TGGCTCATT---ATA---ATGAGATGTTCCTATAAACCAAAGTTG-AAA-----------G---A----TAA--AGAT----AGA----T-T--T-AG---GAAT-------CT-TTG-----------ATCCTT------G-GA---A-A----AAA-ATA------------GTAGTCCTA----ATT-A
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         9368 135 +     11805 AGTGTTA---A-A---ATTAG-C---T--------CG-TT--AATGAT--CAAAT-AGACCTT-TGGCTCATT---ATA---ATGAGATGTTCCTATAAACCAAAGTTG-AAA-----------G---A----TAA--AGAT----AGA----T-T--T-AG---GAAT-------CT-TTG-----------ATCTTT------G-GA---A-A----AAA-ATA-------------CAGTCCTA----ATT-A
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           48703 136 +     52369 AGTGTTA---A-A---ATTAG-C---T--------CG-TT--AATGAT--CAAAT-AGACCTT-TGGCTCATT---ATA---ATGAGATGTTCCTATAAACCAAAGTTG-AAA-----------G---A----TAA--AGAT----AGA----T-T--T-AG---GAAT-------CT-TTG-----------ATCCTT------G-GA---A-A----AAA-ATA------------GCAGTCCTA----ATT-A
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         41090 136 -     44753 AGTGTTA---A-A---ATTAG-C---T--------CG-TT--AATGAT--CAAAT-AGACCTT-TGGCTCATT---ATA---ATGAGATGTTCCTATAAACCAAAGTTG-AAA-----------G---A----TAA--AGAT----AGA----T-T--T-AG---GAAT-------CT-TTG-----------ATCCTT------G-GA---A-A----AAA-ATA------------GCAGTCCTA----ATT-A
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            23013 136 +     27322 AGTGTTA---A-A---ATTAG-C---T--------CG-TT--AATGAT--CAAAT-AGACCTT-TGGCTCATT---ATA---ATGAGATGTTCCTATAAACCAAAGTTG-AAA-----------G---A----TAA--AGAT----AGA----T-T--T-AG---GAAT-------CT-TTG-----------ATCCTT------G-GA---A-A----AAA-ATA------------GCAGTCCTA----ATT-A
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       22659 136 -     53241 AGTGTTA---A-A---ATTAG-C---T--------CG-TT--AATGAT--TAAAT-AGACCTT-TGGCTCATT---ATA---ATGAGATGTTCCTATAAACCAAAGTTG-AAA-----------G---A----TAA--AGAT----AGA----T-T--T-AG---GAAT-------CT-TTG-----------ATCCTT------G-GA---A-A----AAA-ATA------------GTAGTCCTA----ATT-A
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         44922 136 -     48185 AGTGTTA---A-A---ATTAG-C---T--------CG-TT--AATGAT--CAAAT-AGACCTT-TGGCTCATT---ATA---ATGAGATGTTCTTATAAACCAAAGTTG-AAA-----------G---A----TAA--AGAT----AGA----T-T--T-AG---AAAT-------CT-TTG-----------ATCCTT------G-GA---A-A----AAA-ATA------------GCAGTCCTA----ATT-A
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           40646 135 +     77221 AGTGTGA---A-A---GTGAC-C---T--------CA-TT--AATGAT--CAAAT-AGGCCTT-TGACTCTTT---ATA---ATGAGATGTTTCTGTGAACcaaaattg-aaa-----------g---a----gaa--agac----aga----t-t--t-AG---GGAC-------CT-TCA-----------ATACTA------A-GA---A-A----AA--TCA------------GCAACTcta----att-a
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            8296  77 -     27784 AGtgtta---a-a---attatta---t--------ca-tt--aactAG--AAAAT-AGGGCTT-TGGCTCATT---A------TGAGATCATCCTATGATCCAAAGTTG-AC------------------------------------------------------------------------------------------------------------------------------------------------
i Pteronotus_parnellii.KE867983.1                       C 0 I 50
s Pteronura_brasiliensis.PteBra_flattened_line_1343        252622 122 -    344369 ---------------------------------------T--AATTAT--CAAAT-AGTCCC--TGGTTCATT---ATA---ATGAGATGTTCCTATGATCCAAAGTTG-AAT-----------G---A----TAT--AGAG----AGA----C-T--T-GG---GAAT-------TT-T-AATCTTTTGTTAATCTTT------T-GG---A-A----AA--T---------------CAGTTCTA----AAA-A
i Pteronura_brasiliensis.PteBra_flattened_line_1343     I 15 C 0
s Pteropus_alecto.KB031157.1                             13249265 132 -  17261082 Agtgtta---a-a---attatta---t--------ca-tt--aattat--caAAT-AGGCCCT-TGGCTCATT---ATA---ATGAGATGTTCCTATGAtctaattttg-aaa-----------g---a----taa--a--------ga----t-t--t-aG---AAAT-------CT-TCA-----------ATCCTT------T-GG---A-A----AA--TCA------------GAAGTTCTA----GTA-A
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             607216 132 -   3946241 Agtgtta---a-a---attatta---t--------ca-tt--aattat--caAAT-AGGCCCT-TGGCTCATT---ATA---ATGAGATGTTCCTATGAtctaattttg-aaa-----------g---a----taa--a--------ga----t-t--T-AG---AAAT-------CT-TCA-----------ATCCTT------T-GG---A-A----AA--TCA------------GAAGTTCTA----GTA-A
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131542376 130 - 161321710 ---GTTA---A-A---TTTATTC---T--------CA-TT--AATTAT--CAAAT-AGGCCCT-TGGCTTATT---ATA---ATGAGATGTTCCTATGATCCAAAGTTG-AAC-----------A---A----TAT--AGAC----AGA----T-T--T-AA---GAAT-------CT-TCA-----------ATTCTT------T-GG---A-A----AA--T---------------CAGGGATA----ATA-A
i Puma_concolor.QAVW01000427.1                          I 1 C 0
s Pygathrix_cinerea.k141_374971                             33327 135 +     56732 AGTGTCA---A-A---ATTAC-C---T--------CA-TT--AGTGAT--CAAAT-AAGTTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-AAA-----------G---A----CAA--AGAC----AGA----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6809824 135 +   6970761 AGTGTCA---A-A---ATTAC-C---T--------CA-TT--AGTGAT--CAAAT-AAGTTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-AAA-----------G---A----CAA--AGAC----AGA----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             9213 135 +     18040 AGTGTCA---A-A---ATTAC-C---T--------CA-TT--AGTGAT--CAAAT-AAGTTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-AAA-----------G---A----CAA--AGAC----AGA----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                23168 117 +     68503 ------------C---ATTAATA---T--------CA-T------TAT--CTGGC-AGGCACT-TAGCTCATT---ATT---AT-----GTTCCTATAATCCAAAATTA-AAA-----------G---A----AAA--CAAC----AGA----C-C--T-AG----GAT-------CT-CCA-----------ATCCTT------G-G----A-A----AA--TCA------------GCAGTTCTA----ATT-A
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 2 C 0
s Rattus_norvegicus.chr11                                13921037 133 +  90463843 AGTGTGA---A-A---GTGAC-C---T--------CA-TT--AATGAT--CAAAT-AG-CCTT-TGACTCTTT---ATG---GTAAGATGTT-CTGGGAACCAAAATTG-AAA-----------G---A----GAA--TGAT----GGA----T-A--C-AG---GGAC-------CT-TCT-----------ATTCTT------A-GA---A-A----AA--TCA------------GCAATTCTA----ATC-A
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1795097 132 +   2252614 AGTGTTA---A-AC--ATT---A---T--------CA-TT--AATTAT--CAAAT-AGGCCCT-TGGCTCATT---ATA---ATGAGATATTCCCATGATCCAAAGTTG-AAA-----------G---A----TAA--A---GA---GA----T-T--T-AG---GAAG-------CT-TCA-----------ATCCTT------T-AG---A-A----AA--TCA------------GCAGTTCTA----ATA-A
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                            3592 135 -     17045 AGTGTCA---A-A---ATTAC-C---T--------CA-TT--AGTGAT--CAAAT-AAGTTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-AAA-----------G---A----CAA--AGAC----AGA----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206381079 135 - 206558726 AGTGTCA---A-A---ATTAC-C---T--------CA-TT--AGTGAT--CAAAT-AAGTTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAgttg-aaa-----------g---a----caa--agac----aga----g-t--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44859982 135 -  45163003 AGTGTCA---A-A---ATTAC-C---T--------CA-TT--AGTGAT--CAAAT-AAGTTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-AAA-----------G---A----CAA--AGAC----AGA----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                22609 132 +    109198 AGTGTTA---A-A---ATTATTA---T--------CA-TT--AATTAT--CAAAT-AGGCCCT-TGTCTCATT---ATA---ATGAGATGTTCCTATGATCTGAAGTTG-AAA-----------G---A----TAA--A--------GA----T-T--T-AG---AAAT-------CT-TCA-----------GTCCTT------T-GG---A-A----AA--TCA------------GAAGTTCTA----GTA-A
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                      4051 120 -      4338 ------------C---ATTAATATTAT--------CA-T------TAT--CCAGC-AGGCCCT-TAGCTCATT---ATA---AT-----GTTCCTATAATCCAAAACTG-AAA-----------G---A----AAA--CAAC----AGA----C-C--T-AA----GAT-------CT-CCA-----------ATCCTT------G-G----A-A----AA--TCA------------GCAGTTTTA----ATT-A
i Saiga_tatarica.SaiTat_scaffold_371890                 I 2 C 0
s Saimiri_boliviensis.NW_024100938.1                     15678023 135 -  43202129 AGTGCTA---A-A---ATTAC-C---T--------CA-TT--AATGAT--CAAAT-AGGATTT-TGGCCCTTT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-AAG-----------G---A----TGA--AGAC----ATA----T-T--T-TG---GGAT-------CT-TTA-----------ATTCTT------A-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                        9937 135 +     34089 AGTGCTA---A-A---ATTAC-C---T--------CA-TT--AATGAT--CAAAT-AGGATTT-TGGCCCTTT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-AAG-----------G---A----TGA--AGAC----ATA----T-T--T-TG---GGAT-------CT-TTA-----------ATTCTT------A-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                              9876 135 -     60842 AGTGCTA---A-A---ATTAC-C---T--------CA-TT--AATGAT--CAAAT-AGGATTT-TGGCCCTTT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-AAG-----------G---A----TGA--AGAC----ATA----T-T--T-TG---GGAT-------CT-TTA-----------ATTCTT------A-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                              9970 135 +     67014 AGTGCTA---A-A---ATTAC-C---T--------CA-TT--AATGAT--CAAAT-AGGATTT-TGGCCCTTT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-AAG-----------G---A----TGA--AGAC----ATA----T-T--T-TG---GGAT-------CT-TTA-----------ATTCTT------A-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                              9947 135 +     60816 AGTGCTA---A-A---ATTAC-C---T--------CA-TT--AATGAT--CAAAT-AGGATTT-TGGCCCTTT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-AAG-----------G---A----TGA--AGAC----ATA----T-T--T-TG---GGAT-------CT-TTA-----------ATTCTT------A-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                 9884 135 -     76454 AGTGCTA---A-A---ATTAC-C---T--------CA-TT--AATGAT--CAAAT-AGGATTT-TGGCCCTTT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-AAG-----------G---A----TGA--AGAC----ATA----T-T--T-TG---GGAT-------CT-TTA-----------ATTCTT------A-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17346656 135 -  30362882 AGTGCTA---A-A---ATTAA-C---T--------CA-TT--AATGAT--CAAAT-AGGATTT-TGGCTCTTT---GTA---AGGAGATGTTCCTTTAAACCAAAGTTG-AAA-----------G---A----TGA--AGAC----AGA----T-T--T-TG---GGAT-------CT-TTA-----------ATTCTT------A-GA---A-A----AA--TCA------------GTAGTTCTA----TTT-A
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         25977 135 -     62485 AGTGCTA---A-A---ATTAA-C---T--------CA-TT--AATGAT--CAAAT-AGGATTT-TGGCTCTTT---GTA---AGGAGATGTTCCTTTAAACCAAAGTTG-AAA-----------G---A----TGA--AGAC----AGA----T-T--T-TG---GGAT-------CT-TTA-----------ATTCTT------A-GA---A-A----AA--TCA------------GTAGTTCTA----TTT-A
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   41881 142 -    114521 AGCGTGA---A-A---ATTATTA---G--------CAATT--AATTAT--CAAAATAGACCCT-TGACTCATT---ATAATTATGAAATGTTCCTAGGATCCAAAGTTG-AAA-----------G---A----CAA--AGAC----AGA----T-T--T-GG---GGAT-------CT-TAA----------AATTCTT------G-GA---C-A----AA--ACA------------GCAGTTCCA----ACT-A
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        6828 135 +     15331 AGTGTCA---A-A---ATTAC-C---T--------CA-CT--AGTGAT--CAAAT-AAGTTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-AAA-----------G---A----CAA--AGAC----AGA----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      12203 135 +     20762 AGTGTCA---A-A---ATTAC-C---T--------CA-CT--AGTGAT--CAAAT-AAGTTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-AAA-----------G---A----CAA--AGAC----AGA----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         122207 135 +    130994 AGTGTCA---A-A---ATTAC-C---T--------CA-CT--AGTGAT--CAAAT-AAGTTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-AAA-----------G---A----CAA--AGAC----AGA----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           40987 135 +     46263 AGTGTCA---A-A---ATTAC-C---T--------CA-CT--AGTGAT--CAAAT-AAGTTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-AAA-----------G---A----CAA--AGAC----AGA----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     34132 135 +     42640 AGTGTCA---A-A---ATTAC-C---T--------CA-CT--AGTGAT--CAAAT-AAGTTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-AAA-----------G---A----CAA--AGAC----AGA----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        17154 135 +     30600 AGTGTCA---A-A---ATTAC-C---T--------CA-CT--AGTGAT--CAAAT-AAGTTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-AAA-----------G---A----CAA--AGAC----AGA----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTC----TTT-A
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  107196 135 -    120886 AGTGTGA---A-A---GTGAC-C---T--------CA-TT--AATGAT--CAAAT-GGGCCTT-TGACTCTTT---ATA---ATGAGATGTTTCTCTGAAGCAGAACTG-AAA-----------G---A----GAA--GGAC----AGA----T-T--T-AG---AGAC-------CT-TCA-----------ATATTT------A-GA---A-A----AA--TCA------------TTAATTCTA----ATT-C
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            26536 136 +    739146 AGTGTTA---A-A---ATTATTA---T--------CA-TT--TATTAT--CAAAA-AGGTCCT-TGACTCATT---ATA---ATGAGATATTCCTAAAATCCAAACTTC-AAA-----------G---A----TAA--AGAC----AGA----T-T--T-AC---AAAG-------AC-TCA-----------ATCTTT------G-AA---A-A----AA--TAA------------GCAGTCATA----ATT-A
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17776867 136 -  27805282 AGTgcta---a-a---attatta---t--------ca-tt--aattat--CAAAT-GAGCCCT-TGACTTATT---ATA---ATAAGATACTCCTATGATCCAGAGTTC-AAA-----------G---A----AAT--AA-C-A--GGG----T-T--T-AG---GCAT-------CT-TGA-----------AACTTT------G-CA---A-A----AT--TCA------------ACAGTTCTA----ATT-A
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2245542 135 +   2842873 AGTGTTA---A-A---ATGAC-C---T--------CA-TT--AATGAT--CAAAC-AGGACTT-TGACTCATT---GTA---ATGAGATGTCCCTAAGaaccaaatttt-aaa-----------t---a----taa--agac----aga----t-T--T-AG---GGAT-------CT-TCA-----------ATTCTT------G-GG---A-A----AA--TCA------------GCAGTTCTA----ATC-A
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             241377 131 -    276980 -GTGTTA---A-A---ATTATTC---T--------CA-CT--AATTAT--CAACT-AGGCCCT-TGATTCATT---ATA---ATGAGATGTTCCTATGATCCAAAGTTG-AGT-----------G---A----TAC--AGGC----AGA----C-T--T-GG---GAAT-------CT-T-A-----------ATCTTT------T-GG---A-A----AA--T---------------CAGTTCTA----ATA-A
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            35572 131 +     62062 --TGTTA---A-A---ACAATTC---T--------CA-TT--GATTAT--CGAAT-AGGCCCT-TTGCTTATT---ATA---ATGAGATATTCCTATGATCCAAAGTTG-AAC-----------A---A----TAT--AGAC----AGA----T-T--T-AA---GAAT-------AT-TCA-----------ATCCTT------T-GG---A-A----AA--T---------------GAGTACTA----ATT-A
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189277576 115 + 218635234 ------------------------------------------AATTAT--CAAAT-AGTCTCT-TGGCTCATT---ATA---ATGAGACGACTTTGTGATTCAAGGATG-AAA-----------G---A----TAA--AGAC----AGA----C-C--T-AG---GGAC-------TT-TCA-----------ATCCTT------G-GG---A-A----AA--TCA------------GCAGTTTTA----ATT-A
i Sus_scrofa.CM000824.4                                 I 17 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                4561 136 +     20549 AGTGTCA---G-A---ATTATTA---T--------CA-TT--AATTAT--CAAAT-AGGTCTT-TGACTCATT---AGG---ATAAGATGTTCCTATGATCCAAAGCTG-AAA-----------G---A----TAA--AGAC----AGA----T-T--T-AC---GGAT-------CT-GTA-----------ATCCTT------T-GG---A-A----AA--TCA------------GCAGTTCTA----ATA-A
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               18813 139 +     45698 AGTGTTA---A-A---ATTGC-C---T--------CA-TT--AATGAT--CAAAA-AGATTCT-TGGTTCATT---ACA---GTAAGATGCTCCTATGAATCTAAGTTG-AAT-----------G---A----CAA--AGAC----AGA----T-T--T-AG---GGGC-------CT-TTA-----------ACCCTT------G-CT---G-ATATTTA--TCA------------GCCATTCTA----TTT-A
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      813186 115 +   1148477 ------------------------------------------AATTAT--CAAAT-AGGCCCT-AGGATCATT---ATA---ATGAGTTACTCCTATGATCCAAAGTTG-AAA-----------G---A----TAC--AGAC----AGA----T-T--T-AG---AGAT-------CT-TCA-----------ATCCTT------T-GG---A-A----AA--TCA------------GCAGTTCTA----ATT-A
i Tapirus_indicus.TapInd_scaffold_176                   I 17 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  63826 111 +     99546 ------------------------------------------AATTAT--CAAAT-AGGCCCT-AGGATCATT---ATA---ATGAGTTATTCCTATGATCCAACGTTG-AAA-----------G---A----TA------C----AGA----T-T--T-GG---AGAT-------CT-TCG-----------ATCCTT------T-GG---A-A----AA--TCA------------GCAGTTCTA----ATT-A
i Tapirus_terrestris.TapTer_scaffold_14939              I 17 C 0
s Tarsius_lariang.k141_609102                               31387  82 +     42269 -------------------------------------------------------------------------------------------------------aagtta-aaaaggacactgaag---a----aaa--ctac----aaa----t-t--gata---aaag-------tt-tca-----------atccatcagcaag-aa---a-t----at--cca------------tcattaata----tat-a
i Tarsius_lariang.k141_609102                           C 0 I 1327
s Tarsius_wallacei.k141_48636                               64696  82 +     65473 -------------------------------------------------------------------------------------------------------aagtta-aaaaggacactgaag---a----aaa--ctac----aaa----t-t--gata---aaag-------tt-tca-----------atccatcagcaag-aa---a-t----at--cca------------tcattaata----tat-a
i Tarsius_wallacei.k141_48636                           C 0 N 0
s Theropithecus_gelada.CM009951.1                       194013453 135 - 194193292 AGTGTCA---A-A---ATTAC-C---T--------CA-TT--ACTGAT--CAAAT-AAGCTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-GAA-----------G---A----CAA--AGAC----AGA----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             40686 135 -     47444 AGTGTTA---A-A---ATTAC-C---T--------TA-TT--AATGAT--AAAAT-AGGCCTT-TGACTCATT---ATA---ATGAGATGTCTTTATGCAGCAAACTGG-AAA-----------A---A----TAA--AGAC----AGA----T-T--T-GG---GAAT-------TT-TCA-----------AATCTT------C-AA---A-A----AA--TTA------------ACAACTCCA----ATT-T
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 I 22
s Tolypeutes_matacus.TolMat_scaffold_475685                  1990 107 -      3104 ------------------------------------------AATGAT--CAAAA-AGACTC---AACTCATT---ACA---ATGAGATGC---TCTGAATCTAAGTTG-AAT-----------G---A----CAA--AAAC----AGG----T-T--T-AA---GGGC-------TT-TAA-----------ATGCAT------A-GA---T-A----TA--TTA------------G---TTCTA----TTT-A
i Tolypeutes_matacus.TolMat_scaffold_475685             I 17 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  140303  77 -    259118 AGTGTTA---A-A---ATTGTTA---T--------CG-TT--AATTAG--AAAAT-AGGCCTT-TGGCTCATT---T------TAAGATATTCTTATGATCCAATGTTG-AA------------------------------------------------------------------------------------------------------------------------------------------------
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 I 50
s Trachypithecus_auratus.k141_738098                        30475 135 +     38948 AGTGTCA---A-A---ATTAC-C---T--------CA-CT--AGTGAT--CAAAT-AAGTTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-AAA-----------G---A----CAA--AGAC----AGA----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   24035 135 -     32910 AGTGTCA---A-A---ATTAC-C---T--------CA-CT--AGTGAT--CAAAT-AAGTTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-AAA-----------G---A----CAA--AGAC----AGA----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-AA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      5936 135 -     12939 AGTGTCA---A-A---ATTAC-C---T--------CA-CT--AGTGAT--CAAAT-AAGTTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-AAA-----------G---A----CAA--AGAC----AGA----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       5364 135 -     14244 AGTGTCA---A-A---ATTAC-C---T--------CA-CT--AGTGAT--CAAAT-AAGTTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-AAA-----------G---A----CAA--AGAC----AGA----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           46757 135 -     54611 AGTGTCA---A-A---ATTAC-C---T--------CA-CT--AGTGAT--CAAAT-AAGTTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-AAA-----------G---A----CAA--AGAC----AGA----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        4558 135 -     11566 AGTGTCA---A-A---ATTAC-C---T--------CA-CT--AGTGAT--CAAAT-AAGTTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-AAA-----------G---A----CAA--AGAC----AGA----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     6742 135 -     15592 AGTGTCA---A-A---ATTAC-C---T--------CA-CT--AGTGAT--CAAAT-AAGTTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-AAA-----------G---A----CAA--AGAC----AGA----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          5394 135 +     14371 AGTGTCA---A-A---ATTAC-C---T--------CA-CT--AGTGAT--CAAAT-AAGTTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-AAA-----------G---A----CAA--AGAC----AGA----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   3680 135 +     12481 AGTGTCA---A-A---ATTAC-C---T--------CA-CT--AGTGAT--CAAAT-AAGTTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-AAA-----------G---A----CAA--AGAC----AGA----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        3661 135 -     24393 AGTGTCA---A-A---ATTAC-C---T--------CA-CT--AGTGAT--CAAAT-AAGTTTT-TGGTTCATT---GTA---ACGAGATGTTCCTATAAACCAAAGTTG-AAA-----------G---A----CAA--AGAC----AGA----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       8805 135 -     28054 AGTGTCA---A-A---ATTAC-C---T--------CA-CT--AGTGAT--CAAAT-AAGTTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-AAA-----------G---A----CAA--AGAC----AGA----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44663589 135 -  44834318 AGTGTCA---A-A---ATTAC-C---T--------CA-CT--AGTGAT--CAAAT-AAGTTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-AAA-----------G---A----CAA--AGAC----AGA----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       5901 135 +     13828 AGTGTCA---A-A---ATTAC-C---T--------CA-CT--AGTGAT--CAAAT-AAGTTTT-TGGTTCATT---GTA---ATGAGATGTTCCTATAAACCAAAGTTG-AAA-----------G---A----CAA--AGAC----AGA----G-T--T-TG---GAGT-------CT-TTA-----------ATTCTT------G-GA---A-A----AA--TCA------------GTAGCTCTA----TTT-A
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                  11644 126 +     90398 AG-ATTA---A-C---ATTATTA---T--------CA-T------CAT--CAAAT-AGCCCCT-TGGCTCATT---ATA---ATGAGATGTTCCTCCAATCCAAAGTTG-GAA-----------G---A----TAA--AGAC----ACA----T-C--T-AG----GAT-------CT-CCA-----------ATCCTT------G-G----G-A----AA--TC---------------AGTTCTA----ATT-A
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16091875 135 +  31416278 AGTGTTA---A-A---ATTAC-C---T--------CA-TT--AAAGAT--CAAAA-AGGCCCT-TCTCTCATT---ATA---ATGAGATGCTCCTATGAACCTCAGTTG-AAA-----------G---A----TAA--ATGC----AGG----T-T--T-AG---AGAT-------CT-TCA-----------ATTCTT------G-GA---A-A----AA--TTG------------GCAGTTCTA----ATT-A
i Trichechus_manatus.JH594618.1                         I 1 C 0
s Tupaia_chinensis.KB320831.1                             2802603 114 -   3938065 -------------------------------------------ATAAT--CAAAT-AGGTCTC-TGGCTCATT---TTG---ATGAAATGTGCCTATGAGCCAAAGTTG-AAA-----------G---C----TAA--AAGT----AGA----T-T--T-AG---GACT-------CT-TCT-----------AGTCTT------G-GA---A-A----AA--TCA------------GCAGTTCTC----ATT-G
i Tupaia_chinensis.KB320831.1                           I 18 C 0
s Tupaia_tana.TupTan_flattened_line_68454                   11427 114 +     13056 -------------------------------------------ATAAT--CAAAT-AGGTCTC-TGGCTCATT---ATG---ATGAAATGTGCCTATGAACCAAAGTTG-AAA-----------G---C----TAG--AAGT----AGA----T-G--T-AG---GGCT-------CT-TCC-----------AGCCTT------G-GA---A-A----AC--TCA------------GCAGTTCTC----ACT-G
i Tupaia_tana.TupTan_flattened_line_68454               I 18 C 0
s Tursiops_truncatus.MRVK01000923.1                      69319540 119 -  96451834 --------------------------------------TT--AACTAT--CATAT-AGGCCCT-TGGCTCATT---ATA---ATGATATGTTCCTATGATCCAAAGTTG-CAA-----------G---A----TAA--AGAC----AGA----T-C--T-AG----GAT-------CT-TCA-----------ACCTGT------G-G----A-A----AA--TCA------------GCAGTCCTGAATAATT-A
i Tursiops_truncatus.MRVK01000923.1                     I 16 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                    2236  84 +    136657 AGTGTTA---A-T---ATTGTTA---G--------CA-TT--AATTAT--CAAAATAGACACT-TGACTCATT---GTA---ATGAAATGTTCCTATGATCTAAAGTTG-AAT-----------G---A-------------------------------------------------------------------------------------------------------------------------------
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 I 43
s Ursus_maritimus.KK498671.1                              6523042 112 +  28682327 ---------------------------------------t--aattat--cAAAT-AGGCCTT-CAGTTCATT---ATA---ATGAGATGTTCCCATGATCCAGAGTTG-AAT-----------A---A----TAT--AGAC----AGA----C-T--T-GG---GAAT-------CT-T-A-----------ATCCTT------T-GG---A-A----GA--T---------------CAACTGTG----ATA-A
i Ursus_maritimus.KK498671.1                            I 16 C 0
s Varecia_rubra.k141_432109                                 10934 136 -     20643 AGTGTTA---A-A---ATTAG-C---T--------CA-TT--AATGAT--CAAAT-AGACCTT-TGGCTCATT---ATA---ATGAGATGTTCCTATAAACCAAAGTTG-AAA-----------G---A----TAA--AGAT----ATA----T-T--T-AG---GAAT-------CT-TCA-----------ATGCTT------A-GA---A-A----AAA-TTA------------ACAGCCCTA----ATT-A
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             30469 136 -     33872 AGTGTTA---A-A---ATTAG-C---T--------CA-TT--AATGAT--CAAAT-AGACCTT-TGGCTCATT---ATA---ATGAGATGTTCCTATAAACCAAAGTTG-AAA-----------G---A----TAA--AGAT----ATA----T-T--T-AG---GAAT-------CT-TCA-----------ATGCTT------A-GA---A-A----AAA-TTA------------ACAGCCCTA----ATT-A
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1530560 116 -   2331223 agcatga---a-a---atgATTA---T--------CA-TT--AATTAT--CAAAT-AGGCCCT-TGGCTCATT---ATA---ATGGGATGTTCCTATGATCCAAAGTTG-AAA-----------G---A----TAA--AGAC----AGA----T-C--T-AG----GAT-------CT-TCA-----------ATCCCT------G-GA---A-------------------------------------------
i Vicugna_pacos.KN269600.1                              C 0 I 18
s Vulpes_lagopus.VulLag_flattened_line_2045                146698 131 -    281493 AGTGTTA---A-A---ATTATTC---T--------TA-TT--AATTAT--CAAAT-AGGCCCT-TGGCTCATT---TTA---AC-AAATGTTCCTATGATCCAAAGCTG-AAT-----------G---A----TAC--AGAC----AGA----G-T--T-GG---GAAT-------CT-G-A-----------ATCCTT------T-GG---A-A----AA--T---------------CAATTCTA----ATA-A
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       133038 135 -    134049 AGTGTTA---G-A---ATGAC-C---T--------CA-TT--AATGAT--CAAAC-AAGCCTT-TGACTCATT---ATA---ATGAGATGTTCCTAAGAACCAAATTTG-AAA-----------G---A----TAA--AGAC----AGA----T-G--T-AG---GGAT-------CT-TCA-----------ATTCTT------G-GG---A-A----AA--TTA------------GCAGTTCTA----ATT-A
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        222117 132 -    227762 AGTGTTA---A-A---ATTATTC---T--------CA-CT--AATTAT--CAAAT-AGGCCCT-TGGTTCATT---ATA---ATGAGATGTTCCTATGATTCAAAGTCT-AAT-----------G---A----TAT--AGAC----AAA----C-T--T-GA---GAAT-------CT-T-A-----------ATCCTT------T-GG---A-A----AA--T---------------CAGTTATA----ATA-A
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_202118                     2637 135 -      3360 AGTGTCA---A-G---ATGAC-C---T--------CA-TT--AATGAT--CAAAT-AGGCCTT-TGACTCGTT---ATA---ATGAGATGTTTCTATGAACCAAAATTG-AAA-----------G---A----TAA--AGAC----ACA----T-T--T-AG---GGAT-------CT-CCA-----------ATACTT------G-GG---A-A----AA--CCA------------ACAAACCTA----ATT-A
i Zapus_hudsonius.ZapHud_scaffold_202118                C 0 I 25
s Ziphius_cavirostris.ZipCav_flattened_line_60625            4133 119 -     13665 --------------------------------------TT--AATTAT--CAAAT-AGGCCCT-TGGCTCATT---ATA---ATGAGATGTTCCTATGATCCAAAGTTG-AAA-----------G---A----TAA--AGAC----AGA----T-C--T-AG----GAT-------CT-TCA-----------ATGTGT------G-G----A-A----AA--TCA------------GCAGTCCTAAATAATT-A
i Ziphius_cavirostris.ZipCav_flattened_line_60625       I 16 C 0
e Hylobates_pileatus_a.tarseq_592                             37267 2881 -     60944 I
e Symphalangus_syndactylus.tarseq_24                        20205   0 -  13920577 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               19169 53 +    209709 GGGC-----TATATT--TG-CA-----AAA----TACTA--T---T----------------------T-CAACTC---AA-----GCATA-T---TTT--------------------TAT-TTACAAG--G
s Acinonyx_jubatus.LLWD01000356.1                         2042023 53 +   3721120 ggga-----aatatt--ta-ca-----gaa----tactA--T---T----------------------T-CTACTC---AA-----ACATA-T---TTT--------------------GCC-TTACAAC--A
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    119678 56 -    189883 GGAA-----AATATTTTTTTCA-----AAA----AAGCA--T---T----------------------A-CTGCTG---AA-----ATTTA-T---TTT--------------------CAT-TAACAAT--G
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10665887 52 +  23371972 GGGA-----AA-ATC--TG-TA-----GAA----TACTA--T---T----------------------T-CTACTC---AA-----ACGTG-T---TTC--------------------CAT-TTACAGC--A
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7102839 53 -  16596857 GGGA-----AATACC--TG-TA-----GAA----TACTA--T---T----------------------T-CTACTC---AA-----ACGTG-T---TTC--------------------CAT-TTTCAAC--A
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_141108                   3025 76 -      7259 GGAA-----AATATT--TG-TA-----CAA----AAGCC--T---TTGT-GCTTAAGTATATTTTTTCT-CTGCAT---AA-----GTATA-T---TTT--------------------CAC-CTACAGTGCA
i Allactaga_bullata.AllBul_scaffold_141108              I 134 C 0
s Allenopithecus_nigroviridis.k141_2469532                   7066 53 -     60446 GGGC-----TATGTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTC---AA-----GCATG-T---TTT--------------------TAT-TTACAAA--G
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         7780 53 -     29318 GGGC-----TATGTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTC---AA-----GCATG-T---TTT--------------------TAT-TTATAAA--G
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         6718 53 +     38766 GGGC-----TATGTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTC---AA-----GCATG-T---TTT--------------------TAT-TTATAAA--G
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          7676 53 -     80423 GGGC-----TATGTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTC---AA-----GCATG-T---TTT--------------------TAT-TTATAAA--G
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              2619 52 +     19852 GGGC-----CATATT--TG-CA-----AAA----TACTA--T---T----------------------T-CTACCC---AA-----GC-TA-T---TTT--------------------TAT-TTACAAG--A
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                4835 52 -     12443 GGGC-----CATATT--TG-CA-----AAA----TACTA--T---T----------------------T-CTACCC---AA-----GC-TA-T---TTT--------------------TAT-TTACAAG--A
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                             2162 52 +      5070 GGGC-----CATATT--TG-CA-----AAA----TACTA--T---T----------------------T-CTACCC---AA-----GC-TA-T---TTT--------------------TAT-TTACAAG--A
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_macconnelli.k141_2318944                          4644 52 -     24210 GGGC-----CATATT--TG-CA-----AAA----TACTA--T---T----------------------T-CTACCC---AA-----GC-TA-T---TTT--------------------TAT-TTACAAG--A
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_494922                             1148 52 -      8325 GGGC-----CATATT--TG-CA-----AAA----TACTA--T---T----------------------T-CTACCC---AA-----GC-TA-T---TTT--------------------TAT-TTACAAG--A
i Alouatta_nigerrima.k141_494922                        C 0 C 0
s Alouatta_palliata.k141_405616                              7043 52 +     16794 GGGC-----CATATT--TG-CA-----AAA----TACTA--T---T----------------------T-CTACCC---AA-----GC-TA-T---TTT--------------------TAT-CTACAAG--A
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_347198                             1095 52 +      9111 GGGC-----CATATT--TG-CA-----AAA----TACTA--T---T----------------------T-CTACCC---AA-----GC-TA-T---TTT--------------------TAT-TTACAAG--A
i Alouatta_puruensis.k141_347198                        C 0 C 0
s Alouatta_seniculus.k141_790278                             6343 52 -      9835 GGGC-----CATATT--TG-CA-----AAA----TACTA--T---T----------------------T-CTACCC---AA-----GC-TA-T---TTT--------------------TAT-TTACAAG--A
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3529056 53 +   4113121 GGGC-----AATATT--TG-CA-----GAA----TACTG--T---T----------------------T-ctactt---aa-----atata-t---ttt--------------------cat-ttacaat--G
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      395028 29 -    631301 --------------------------------------------------------------------T-CTAATA---GA-----GCACA-T---TTT--------------------CAT-TCATAAT--G
i Anoura_caudifer.AnoCau_scaffold_422                   I 73 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             6286 53 +     55446 GGGC-----AATATT--TT-CA-----GAA----TACTG--T---T----------------------T-CTACTG---AA-----GTATa-t---ttc--------------------cat-ttataat--g
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 I 183
s Aotus_azarae.k141_3170768                                 67951 52 +     78111 GGGC-----CATATT--TG-CA-----AAA----AACTA--C---T----------------------T-CTACTC---AA-----GC-TA-T---TTT--------------------TAT-TTACAAG--A
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                           10892 52 +     22701 GGGC-----CATATT--TG-CA-----AAA----AACTA--C---T----------------------T-CTACTC---AA-----GC-TA-T---TTT--------------------TAT-TTACAAG--A
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5754861 52 +   9889416 GGGC-----CATATT--TG-CA-----AAA----AACTA--C---T----------------------T-CTACTC---aa-----gc-ta-t---ttt--------------------tat-ttacaag--A
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                            11440 52 -    104377 GGGC-----CATATT--TG-CA-----AAA----AACTA--C---T----------------------T-CTACTC---AA-----GC-TA-T---TTT--------------------TAT-TTACAAG--A
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                              11469 52 +     23246 GGGC-----CATATT--TG-CA-----AAA----AACTA--C---T----------------------T-CTACTC---AA-----GC-TA-T---TTT--------------------TAT-TTACAAG--A
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     4089 53 +     11424 GAGC-----AATATT--TG-CA-----GAT----TGCTC--T---T----------------------T-CTGCTG---AA-----GCATG-T---TTT--------------------GAT-TTACAAT--G
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        8060 40 +      9265 ---------------------A-----GAA----TACTA--T---T----------------------T-CTACTC---AA-----GCTTG-T---TTT--------------------TAT-TTACAAT--G
i Arctocebus_calabarensis.k141_587554                   I 12 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                13307 56 -     29036 GGGC-----ACCATT--TG-CA-----GAA----TACTA--T---T----------------------T-CTACTT---GA-----GCACA-TTAGTTT--------------------CAT-TTATTAT--G
i Artibeus_jamaicensis.ArtJam_scaffold_41619            I 51 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9544753 52 +  39197703 GGGC-----CATATC--TG-CA-----AAA----TACTA--T---T----------------------T-CTACTC---AA-----GC-TA-T---TTT--------------------TAT-TTACAAG--A
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             66027 52 +     85812 GGGC-----CATATC--TG-CA-----AAA----TACTA--T---T----------------------T-CTACTC---AA-----GC-TA-T---TTT--------------------TAT-TTACAAG--A
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                17037 52 +     89302 GGGC-----CATATC--TG-CA-----AAA----TACTA--T---T----------------------T-CTACTC---AA-----GC-TA-T---TTT--------------------TAT-TTACAAG--A
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             21541 52 -     58268 GGGC-----CATATC--TG-CA-----AAA----TACTA--T---T----------------------T-CTACTC---AA-----GC-TA-T---TTT--------------------TAT-TTACAAG--A
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             69535 52 +    119057 GGGC-----CATATC--TG-CA-----AAA----TACTA--T---T----------------------T-CTACTC---AA-----GC-TA-T---TTT--------------------TAT-TTACAAG--A
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              11504 52 -     25888 GGGC-----CATATC--TG-CA-----AAA----TACTA--T---T----------------------T-CTACTC---AA-----GA-TA-T---TTT--------------------TAT-TTACAAG--A
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                12597 53 -     16375 GGAT-----AATATT--TG-CA-----GAA----TAGTA--C---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------CAT-TTACAGT--G
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               6213 53 +      6337 GGAT-----AATATT--TG-CA-----GAA----TAGTA--C---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------CAT-TTACAGT--G
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26386485 53 +  51448160 GAGC-----AATACT--TG-AA-----GAA----TACTA--T---T----------------------T-CTACTC---aa-----gcata-t---ttt--------------------cat-ttacaaT--G
i Balaenoptera_acutorostrata.KI537095.1                 I 54 C 0
s Balaenoptera_bonaerensis.DF502048.1                       11659 53 -     13118 GAGC-----AATACT--TG-AA-----GAA----TACTA--T---T----------------------T-CTACTC---aa-----gcata-t---ttt--------------------cat-ttacaaT--G
i Balaenoptera_bonaerensis.DF502048.1                   I 24 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   51256 53 -     72089 GGGC-----AATATT--TG-TA-----GAA----TACTG--T---T----------------------T-CTACTT---AA-----ATATA-T---TTT--------------------CAT-TTACAAT--G
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   305981 53 -   6870073 GGGC-----AATATT--TG-CA-----GAA----TACTG--T---T----------------------T-CTACTT---AA-----GTATA-T---TTC--------------------CAT-TTACAGT--A
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22960087 53 + 161108492 GGGC-----AATATT--TG-CA-----GAA----TACTG--T---T----------------------T-CTACTT---AA-----GTATA-T---TTC--------------------CAT-TTACAAT--G
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     422266 53 +    998990 GGGC-----AATATT--TG-CA-----GAA----TACTG--T---T----------------------T-CTACTT---AA-----GTATA-T---TTC--------------------CAT-TTACAAT--G
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22668739 53 + 158972876 GGGC-----AATATT--TG-CA-----GAA----TACTG--T---T----------------------T-CTACTT---AA-----GTATA-T---TTC--------------------CAT-TTACAAT--G
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               677589 53 +   1914593 GGGC-----AATATT--TG-CA-----GAA----TACTG--T---T----------------------T-CTACTT---AG-----GTATA-T---TTC--------------------CAT-TTACAAT--G
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               119367 52 -    171031 GGGT-----CATATT--TG-CA-----AAA----TACTA--T---T----------------------T-CTACTC---AA-----GC-TA-T---TTT--------------------TAT-TTACAAG--A
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 18387 52 +    125063 GGGT-----CATATT--TG-CA-----AAA----TACTA--T---T----------------------T-CTACTC---AA-----GC-TA-T---TTT--------------------TAT-TTACAAG--A
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                20434 52 -    216513 GGGT-----CATATT--TC-CA-----AAA----TACTA--T---T----------------------T-CTACTC---AA-----GC-TA-T---TTT--------------------TAT-TTACAAG--A
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       12977 52 -    134917 GGGT-----CATATT--TG-CA-----AAA----TACTA--T---T----------------------T-CTACTC---AA-----GC-TA-T---TTT--------------------TAT-TTACAAG--A
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3225586 31 -   8989139 GGGC-----AATATT--CA-CA-----GAA----TACTG--T---T----------------------T-CTACTC---------------------------------------------------------
i Camelus_bactrianus.KN276303.1                         I 18 I 20
s Camelus_dromedarius.KN271192.1                           403286 31 -  15254737 GGGC-----AATATT--CA-CA-----GAA----TACTG--T---T----------------------T-CTACTC---------------------------------------------------------
i Camelus_dromedarius.KN271192.1                        I 18 I 20
s Camelus_ferus.KB016973.1                                2979024 31 +   6889770 GGGC-----AATATT--CA-CA-----GAA----TACTG--T---T----------------------T-CTACTC---------------------------------------------------------
i Camelus_ferus.KB016973.1                              I 18 I 20
s CanFam4.chr31                                          11528743 53 +  39901454 GGGC-----AATTTC--TG-TA-----GAA----TACTA--T---T----------------------T-CTACTC---AA-----ACATG-T---TTT--------------------TAT-TTGCAAA--A
i CanFam4.chr31                                         I 38 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   23717 53 +     87036 GGGC-----AATTTC--TG-TA-----GAA----TACTA--T---T----------------------T-CTACTC---AA-----ACATG-T---TTT--------------------TAT-TTGCAAC--A
i Canis_lupus_VD.CanFam_VD_scaffold_16982               I 38 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11275640 53 -  35597290 GGGC-----AATTTC--TG-TA-----GAA----TACTA--T---T----------------------T-CTActc---aa-----acatg-t---ttt--------------------tat-ttgcaAA--A
i Canis_lupus_dingo.QKWQ01001993.1                      I 38 C 0
s Canis_lupus_familiaris.chr31                           11098138 53 +  39895921 GGGA-----AATTTC--TG-TA-----GAA----TACTA--T---T----------------------T-CTActc---aa-----acatg-t---ttt--------------------tat-ttgcaAA--A
i Canis_lupus_familiaris.chr31                          I 38 C 0
s Canis_lupus_orion.HG994411.1                           16464922 53 -  44759192 GGGC-----AATTTC--TG-TA-----GAA----TACTA--T---T----------------------T-CTActc---aa-----acatg-t---ttt--------------------tat-ttgcaAC--A
i Canis_lupus_orion.HG994411.1                          I 38 C 0
s Capra_aegagrus.CM003214.1                              21336490 53 + 157394656 GGGC-----AATATT--TG-CA-----GAA----TACTG--T---T----------------------T-CTactt---aa-----acata-t---ttt--------------------cat-ttacaaT--G
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135714843 53 - 157403528 GGGC-----AATATT--TG-CA-----GAA----TACTG--T---T----------------------T-CTActt---aa-----acata-t---ttt--------------------cat-ttacaAT--G
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          314936 58 +    345090 gagc-----ttcatt--tc-ca-----gaa----tgcaa--g---g----------------------C-Tgactc---aacatatgcaaa-t---caa--------------------taa-atgtaat--c
i Carlito_syrichta.NW_007248099.1                       I 1324 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               64293 53 +     67245 GGGC-----ACTATT--TC-CT-----GAA----TACTA--T---T----------------------T-CTACTT---GA-----GCACA-T---TTT--------------------CAT-TCATAAT--G
i Carollia_perspicillata.CarPer_scaffold_4436           I 50 C 0
s Castor_canadensis.CasCan_scaffold_1326                     1592 53 -    202837 GGGC-----AATATT--TG-CA-----CAA----TGCTA--T---T----------------------T-TTCCTC---AA-----GCATA-T---TTT--------------------CAT-TTACAAC--A
i Castor_canadensis.CasCan_scaffold_1326                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   165302 53 -    276539 GGAC-----AATATT--TG-CA-----CAA----TACTA--T---T----------------------T-CTACTC---AA-----GCGTA-T---TTT--------------------CAT-TTACAAT--G
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15791830 47 -  24422027 ---T-----AATATT--TG-TA-----GGG----T---C--C---T----------------------T-CCACTT---TA-----TTGTA-C---TTT--------------------TGT-TTACACT--G
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15803775 47 -  24440124 ---T-----AATATT--TG-TA-----GGG----T---C--C---T----------------------T-Ccactt---ta-----ttgta-t---ttt--------------------tgt-ttacact--G
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       181947 47 +    436027 ---T-----AATATT--TG-TA-----GGG----T---C--C---T----------------------T-CCACTT---TA-----TTGTA-T---TTT--------------------TGT-TTACACT--G
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18897103 52 -  29618158 GGGC-----CATATT--TG-CA-----AAA----TACTA--C---T----------------------T-CTACTC---AA-----GC-TA-T---TTT--------------------TAT-TGACAGG--A
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                13753 52 -     26817 GGGC-----CATATT--TG-CA-----AAA----TACTA--C---T----------------------T-CTACTC---AA-----GC-TA-T---TTT--------------------TAT-TGACAGG--A
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                17996 52 +     25043 GGGC-----CATATT--TG-CA-----AAA----TACTA--C---T----------------------T-CTACTC---AA-----GC-TA-T---TTT--------------------TAT-TGACAGG--A
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                        13973 58 +     21754 gagc-----ttcatt--tc-ca-----gaa----tgcaa--g---g----------------------c-tgactc---aacatatgcaaa-t---cag--------------------taa-atgcaat--c
i Cephalopachus_bancanus.k141_702587                    I 1346 C 0
s Ceratotherium_simum.JH767818.1                          4370569 53 +   7569818 GGGC-----AATATT--TG-CA-----GAA----TACTA--T---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------CAT-TCGCAAT--T
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_171732          726 53 +      8380 GGGC-----AATATT--TG-CA-----GAA----TACTA--T---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------CAT-TCGCAAT--T
i Ceratotherium_simum_cottoni.CerCot_scaffold_171732    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6561005 53 +   6739814 GGGC-----TCTCTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTactc---aa-----acata-t---ttt--------------------tat-ttacaaa--g
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      32482 53 +     60454 GGGC-----TCTCTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTC---AA-----ACATA-T---TTT--------------------TAT-TTACAAA--G
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          7686 53 -     21101 GGGC-----TCTCTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTC---AA-----ACATA-T---TTT--------------------TAT-TTACAAA--G
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         64996 53 -    107033 GGGC-----TCTCTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTC---AA-----ACATA-T---TTT--------------------TAT-TTACAAA--G
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        7857 53 -     17608 GGGC-----TATGTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTC---AA-----GCATG-T---TTT--------------------TAT-TTACAAA--G
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          5025 53 +     45019 GGGC-----TATGTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTC---AA-----GCATG-T---TTT--------------------TAT-TTACAAA--G
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           5293 53 +     15177 GGGC-----TATGTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTC---AA-----GCACG-T---TTT--------------------TAT-TTACAAA--G
i Cercopithecus_diana.k141_2561715                      I 5 C 0
s Cercopithecus_hamlyni.k141_129805                          7907 53 +     16677 GGGC-----TATGTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTC---AA-----GCATG-T---TTT--------------------TAT-TTACAAA--G
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           30095 53 +     35983 GGGC-----TATGTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTC---AA-----GCACG-T---TTT--------------------TAT-TTACAAA--G
i Cercopithecus_lowei.k141_623764                       I 5 C 0
s Cercopithecus_albogularis.ctg51                              11996628 53 +  12117833 GGGC-----TATGTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTC---AA-----GCACG-T---TTT--------------------TAT-TTACAAA--G
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46483610 53 +  46592721 AGGC-----TATGTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTC---AA-----GCATG-T---TTT--------------------TAT-TTACAAA--G
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                       1713 53 -     27215 GGGC-----TATGTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTC---AA-----GCACG-T---TTT--------------------TAT-TTACAAA--G
i Cercopithecus_neglectus.k141_2169300                  I 5 C 0
s Cercopithecus_nictitans.k141_1129315                       7921 53 +     35577 GGGC-----TATGTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTC---AA-----GCATG-T---TTT--------------------TAT-TTACAAA--G
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        7715 53 -     25661 GGGC-----TATGTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTC---AA-----GCATG-T---TTT--------------------TAT-TTACAAA--G
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        7879 53 -     17744 GGGC-----TATGTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTC---AA-----GCACG-T---TTT--------------------TAT-TTACAAA--G
i Cercopithecus_pogonias.k141_3109732                   I 5 C 0
s Cercopithecus_roloway.k141_2263608                        27248 53 +     37128 GGGC-----TATGTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTC---AA-----GCACG-T---TTT--------------------TAT-TTACAAA--G
i Cercopithecus_roloway.k141_2263608                    I 5 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           6247 25 -      6963 GGGT-----AATGTT--TG-CA-----AAA----CACCA--A---T----------------------T----------------------------------------------------------------
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 I 16
s Cheirogaleus_major.k141_1157592                           64813 53 -     68416 GGGT-----AATATT--TG-CA-----GAA----TACTA--T---T----------------------T-CTACTT---AA-----GCATA-T---TTT--------------------CAT-TTACAAT--G
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_854352                            1114 53 +     27737 GGGT-----AATATT--TG-CA-----GAA----TACTA--T---T----------------------T-CTACTT---AA-----ACATA-T---TTT--------------------CAT-TTACAAT--G
i Cheirogaleus_medius.k141_854352                       C 0 C 0
s Cheracebus_lucifer.k141_619653                            11061 52 -     18223 GGGC-----AATATT--TA-CA-----AAA----TACTA--T---T----------------------T-CTACTC---AA-----GC-TA-T---TTT--------------------TAT-TTACAAG--A
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              2802 52 +    188999 GGGC-----AATATT--TA-CA-----AAA----TACTA--T---T----------------------T-CTACTC---AA-----GC-TA-T---TTT--------------------TAT-TTACAAG--A
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           47101 52 +     57117 GGGC-----AATATT--TA-CA-----AAA----TACTA--T---T----------------------T-CTACTC---AA-----GC-TA-T---TTT--------------------TAT-TTACAAG--A
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          51781 52 +     54541 GGGC-----AATATT--TA-CA-----AAA----TACTA--T---T----------------------T-CTACTC---AA-----GC-TA-T---TTT--------------------TAT-TTACAAG--A
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15966528 50 +  43084221 GGAT-----AATATT--TG-TA-----GGA----T---C--C---T----------------------T-ctgctt---ta-----ttgta-t---ttt--------------------tgc-ttACACt--g
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         76581 53 +    196370 GGGT-----CATATT--TG-CA-----AAA----TACTA--T---T----------------------T-CTACTC---AA-----GC-TATT---TTT--------------------TAT-TTACAAG--A
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          20762 53 +     40510 GGGT-----CATATT--TG-CA-----AAA----TACTA--T---T----------------------T-CTACTC---AA-----GC-TATT---TTT--------------------TAT-TTACAAG--A
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15145441 53 -  15256731 GGGC-----TATGTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTC---AA-----GCATG-T---TTT--------------------TAT-TTATAAA--G
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      39905 53 -     53260 GGGC-----TATGTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTC---AA-----GCATG-T---TTT--------------------TAT-TTATAAA--G
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101150464 53 + 101219884 GGGC-----TATGTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTC---aa-----gcatg-t---ttt--------------------tat-ttataaa--g
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                20292 53 -     21363 GGGC-----AATATT--TG-CA-----GAG----CATTA--T---T----------------------T-CCTCTC---AA-----GCATG-T---TTT--------------------CAT-TTACAAT--G
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           765596 53 +    964067 GGGC-----AATATT--TG-CA-----GAG----CATTA--T---T----------------------T-CCTCTC---AA-----GCATG-T---TTT--------------------CAT-TTACAAT--G
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_304221              3248 40 -      7053 ---------------------A-----GAA----TAGCA--C---T----------------------T-CTATTG---AA-----GCATA-C---TTT--------------------CAT-TTATAAT--G
i Chrysochloris_asiatica.ChrAsi_scaffold_304221         I 12 C 0
s Colobus_angolensis.KN985967.1                          10890234 53 +  10971483 GGGT-----TACGTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTc---aa-----gcata-t---ttt--------------------tat-ttacaaa--g
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147668162 53 + 156195979 GGGT-----TACGTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------TAT-TTACAAA--G
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            20145 53 +     23629 GGGC-----TATGTT--TG-CA-----AAA----CACTG--T---T----------------------T-CTACTC---AA-----GCGTA-T---TTT--------------------TAT-TTACAAA--G
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60624555 53 +  78930452 GGGC-----AGTATT--TG-CA-----AAA----TACTA--T---T----------------------T-CCCCTC---TA-----GCTTA-T---TTT--------------------CAC-TTACAAT--G
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         4966 52 -      5782 GGGC-----AATATT--TG-CA-----GAA----TGCTT--T---C----------------------T-CTACTC---AA-----GCATT-T---TTC---------------------AT-TTATAAT--G
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    I 28 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 284584 54 -    399297 GGAA-----AATATTT-TG-CA-----AAA----AGCTA--T---T----------------------A-CTGCTG---AA-----GTTTA-T---TTT--------------------CAT-TTTCAGT--G
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53036870 54 +  72327488 caaa-----aatatt-ttg-ca-----aaa----agCCA--T---T----------------------A-CTGCTG---AA-----GTCTA-T---TTT--------------------CAT-TTACATT--G
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              4428 52 -     22648 AGG------ACAAAA--TT-TA-----GAA----TATTA--T---T----------------------T-ATACTC---AA-----TTATA-T---TTT--------------------CAC-ACAAAAT--T
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            59955 53 -     70449 GGGC-----AATATT--TA-CA-----GAA----TACTA--T---T----------------------T-CTACCC---AA-----ACATA-T---TTT--------------------GAT-TTACAAC--A
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  216719 54 -    956709 GGAC-----AACATT--TG-CC-----C-C----TGCTC--T---T----------------------C-CACCTCTA-TA-----GAGTA-T---TTT--------------------CAT-TTACAGT--T
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 38245 50 -     67205 GGGT-----AACATT--GG-TA-----CTA----T---C--A---T----------------------T-CCTCTT---TA-----TTGTA-T---TTT--------------------TTC-CTATACT--G
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                23061 50 +     26546 GGTT-----AATATT--TG-TA-----GGA----T---C--C---T----------------------T-CTACTT---TA-----TTGCA-T---TTT--------------------CAT-TTACACT--G
i Cuniculus_paca.CunPac_flattened_line_16637            I 32 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             64208 47 -    236241 ---T-----AATATT--TG-TA-----GGG----T---C--C---T----------------------T-CTACTT---TA-----TTGTA-T---TTT--------------------CAT-TTATAAT--G
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          187306 25 -   6883506 GGGt-----catatt--tg-ca-----aaa----tataa--a---t----------------------t----------------------------------------------------------------
i Dasypus_novemcinctus.JH568778.1                       C 0 I 15
s Daubentonia_madagascariensis.ctg11                     16850759 53 +  31942871 GGGT-----AATATT--TG-CA-----GAA----TACTA--T---T----------------------T-CCACTC---AA-----GCATA-G---TTT--------------------CAT-TTACAAT--G
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80043071 53 -  96802777 GAGC-----AATACT--TC-CA-----GAA----TACTA--T---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------CAT-TTACAAT--G
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18703538 30 -  18957592 ---------------------------------------------T----------------------G-CTACTC---Ag-----gcaca-t---ttt--------------------cat-ttataat--g
i Desmodus_rotundus.KZ672188.1                          I 69 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 328968 53 +    993696 GGGC-----AATATT--TG-CA-----GAA----TACTA--T---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------CAT-TCGCAAT--T
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   9602 53 +    151128 GGGC-----AATATT--TG-CA-----GAA----TACTA--T---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------CAT-TCGCAAT--T
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   162140 50 +    228994 GGGT-----AATATT--TA-TA-----GGA----T---C--C---T----------------------T-CTGATT---TG-----TTGTA-T---TTT--------------------TGC-TTACACT--G
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3661864 53 +   4240102 GAGG-----AATATT--AG-Ta-----tga----tactt--t---t----------------------t-attttc---aa-----gcatt-t---ttc--------------------ctt-ttcaagC--A
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  4235 32 -     11986 GAGG-----AATATT--AG-TA-----TGA----TACTT--T---T----------------------T-ATTTTC---A-----------------------------------------------------
i Dipodomys_stephensi.DipSte_scaffold_84338             I 1 I 4
s Dolichotis_patagonum.DolPat_scaffold_14102                42771 51 -     73477 ---TAAATTAATATT--AG-TA-----GGA----T---C--T---T----------------------T-CCACTT---TA-----TTGTA-T---T-T--------------------CAC-TTACACT--G
i Dolichotis_patagonum.DolPat_scaffold_14102            I 13 C 0
s Echinops_telfairi.JH980316.1                           23007215 53 -  44670279 GGGG-----AATATT--TG-AA-----GAG----CGGTA--C---T----------------------T-CTGTGC---AA-----GCATA-G---TTT--------------------TAT-TTGCATT--G
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 15686 58 +     24177 GGGC-----AATGTT--TG-CA-----GAA----TACTA--T---T----------------------T-Ctactc---at-----gtatt-t---ttt---------------tttaatat-ctataat--g
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1499051 53 +   1727528 GGGC-----AATATT--TG-CA-----GAA----TACTG--T---T----------------------T-CTACTG---AA-----GTATA-T---TTC--------------------CAT-TTACAAT--G
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Elephantulus_edwardii.JH947210.1                        7837006  4 +  15467074 GGAG---------------------------------------------------------------------------------------------------------------------------------
i Elephantulus_edwardii.JH947210.1                      C 0 I 301
s Ellobius_lutescens.LOEQ01003611.1                        245572 54 -    369425 gaaa-----attatt-tca-cC-----AAA----AGCCA--A---T----------------------A-CTGTTG---AA-----GCTTA-C---TTT--------------------CAT-TTACAAT--G
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01076532.1                           1923 54 +      9159 gaaa-----attatt-tca-cC-----AAA----AGCCA--A---T----------------------A-CTGTTG---AA-----GCTTA-T---TTT--------------------CAT-TTACAAT--G
i Ellobius_talpinus.LOJH01076532.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85879904 53 +  99434291 GGGA-----AATACC--TG-TA-----GAA----TACTA--T---T----------------------T-CTACTC---AA-----Gcatg-t---ttc--------------------cat-tttcaac--a
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4711289 53 +   6522550 GAGC-----AATATT--TG-CA-----GAA----TACTA--T---T----------------------G-CTACtg---aa-----gcaca-t---ttt--------------------tat-ttatcat--t
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5858828 53 -   7175178 GGAC-----AATATT--TA-CA-----GAG----AACTC--T---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------CAT-TCATAAT--G
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13357314 53 +  41866177 GGAC-----AATATT--TA-CA-----GAG----AACTC--T---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------CAT-TCataat--g
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          18804 53 +     92910 GGAC-----AATATT--TA-CA-----GAG----AACTC--T---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------CAT-TCataat--g
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11544310 53 +  16010500 GGGA-----AATATT--TG-CA-----GAG----TATTG--T---T----------------------T-CTACTC---AA-----GCATG-T---TTT--------------------CAT-TTACAAC--A
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48782474 53 -  48907691 GGGC-----TATGTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTC---AA-----GCATG-T---TTT--------------------TAT-TTATAAA--G
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          321330 53 +    330699 GAGC-----AATACT--TG-AA-----GAA----TACTA--T---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------CAT-TTACAAT--G
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             67782 53 +     89355 GAGC-----AATATT--TG-CA-----GAA----TACTA--T---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------CAT-TTACAAT--G
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                             10879 53 +     13586 GGGT-----AATATT--TG-CA-----GAA----TACTA--C---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------CAT-TTACAAT--G
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_1015201                              4138 53 -      4292 GGGT-----AATATT--TG-CA-----GAA----TACTA--C---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------CAT-TTACAAT--G
i Eulemur_collaris.k141_1015201                         C 0 N 0
s Eulemur_coronatus.k141_3240342                            17275 53 +     36558 GGGT-----AATATT--TG-CA-----GAA----TACTG--C---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------CAT-TTACAAT--G
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            13597 53 +     60246 GGGT-----AATATT--TG-CA-----GAA----TACTA--C---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------CAT-TTACAAT--G
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                17082 53 +    109717 GGGT-----AATATT--TG-CA-----GAA----TACTA--C---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------CAT-TTACAAT--G
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 5065 53 -     19505 GGGT-----AATATT--TG-CA-----GAA----TACTA--C---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------CAT-TTACAAT--G
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                21740 53 +     27497 GGGT-----AATATT--TG-CA-----GAA----TACTA--C---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------CAT-TTACAAT--G
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           24196 53 +     26808 GGGT-----AATATT--TG-CA-----GAA----TACTA--C---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------CAT-TTACAAT--G
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                38928 53 +     46535 GGGT-----AATATT--TG-CA-----GAA----TACTA--C---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------CAT-TTACAAT--G
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              21669 53 -     29447 GGGT-----AATATT--TG-CA-----GAA----TACTA--C---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------CAT-TTACAAT--G
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129901598 53 - 159252932 GGGC-----AATATT--TA-CA-----GAA----TACTA--T---T----------------------T-CTACTC---AA-----ACATA-T---TTT--------------------GAC-TTACAAC--A
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129288575 53 - 158578461 GGGC-----AATATT--TA-CA-----GAA----TACTA--T---T----------------------T-CTACTC---AA-----ACATA-T---TTT--------------------GAC-TTACAAC--A
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 29765 53 +     52776 GGGC-----AATATT--TA-CA-----GAA----TACTA--T---T----------------------T-CTACTC---AA-----ACATA-T---TTT--------------------GAC-TTACAAC--A
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13899621 50 -  19261668 AGGT-----AATATC--TG-CA-----AGT----T---C--CTTTt----------------------t-tgattt---ta-----ttgta-t---tt-----------------------t-ttacaaT--G
i Fukomys_damarensis.KN123630.1                         I 33 C 0
s Galago_moholi.ctg555                                     216921 53 -    847004 GTGT-----AATATT--TG-CA-----GAA----TACTA--T---T----------------------T-CTACTC---AA-----GCATG-G---TTT--------------------CAT-TTACAAT--G
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           19283 53 -     43889 GTGT-----AATATT--TG-CA-----GAA----TACTA--T---T----------------------T-CTATTC---AA-----GCATG-G---TTT--------------------CAT-TTACAAT--G
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          16424 53 +     27357 GTGT-----AATATT--TG-CA-----GAA----TACTA--T---T----------------------T-CTACTC---AA-----GCATG-T---TTT--------------------CAT-TTACAAT--G
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               161192 53 +    324696 GGGC-----AATATT--TT-CA-----GAA----TACTA--T---T----------------------T-CTACTC---AA-----GTATA-T---TTT--------------------CAT-TTACAAT--A
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    188779 53 -    189561 GGGC-----AATATT--TT-CA-----GAA----TACTG--T---T----------------------T-CTACTG---AA-----GTATA-T---TTC--------------------CAT-TTACAAT--G
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           18134 40 -     18683 ---------------------A-----GAA----TGCTC--T---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------CAT-TTATAAT--A
i Glis_glis.GliGli_scaffold_79770                       I 30 C 0
s Gorilla_beringei.k141_111300                              10875 53 -     14630 GGGC-----TATATT--TG-CA-----AAA----TACTA--T---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------TAT-TTACAAA--G
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119657975 53 - 195582420 GGGC-----TATATT--TG-CA-----AAA----TACTA--T---T----------------------T-CTACTc---aa-----gcata-t---ttt--------------------tat-ttacaaa--g
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   81422 53 +    118900 GGAC-----AATATT--TG-CA-----GAA----TGCTC--T---T----------------------T-CTACTC---AT-----GCATA-T---TTT--------------------CAT-TTACAAT--A
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         7671 53 +     10286 GGGT-----AATATT--TG-CA-----GAA----TACTA--C---T----------------------T-CTACTG---AA-----GCATA-T---TTT--------------------CAT-TTACAAT--G
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             6152 53 -     11661 GGGT-----AATATT--TG-CA-----GAA----TACTA--C---T----------------------T-CTACTG---AA-----GCATA-T---TTT--------------------CAT-TTACAAT--G
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                            11476 53 +     56096 GGGT-----AATATT--TG-CA-----GAA----TACTA--C---T----------------------T-CTACTG---AA-----GCATA-T---TTT--------------------CAT-TTACAAT--G
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        34725 53 -     42470 GGGT-----AATATT--TG-CA-----GAA----TACTA--C---T----------------------T-CTACTG---AA-----GAATA-T---TTT--------------------CAT-TTACAAT--G
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        51351 53 -     54384 GGGT-----AATATT--TG-CA-----GAA----TACTA--C---T----------------------T-CTACTG---AA-----GCATA-T---TTT--------------------CAT-TTACAAT--G
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              25073 53 +     53719 GGGC-----AATATT--TA-CA-----GAA----TACTA--T---T----------------------T-CAACCC---AA-----ACATA-T---TTT--------------------GAT-TTACAAC--A
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                35870 53 -     91191 GGGC-----AATATT--TG-CA-----GAA----TACTG--T---T----------------------T-ATACTT---AA-----ATATA-T---TTT--------------------CAT-TTACAAT--G
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2563786 52 +  31725842 AGGT-----AATATT--TT-CA-----GGA----T---C--CTTTT----------------------T-caactt-cata-----ttatt-t---tt-----------------------t-ttgcaaT--G
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               65367 52 +     73687 GAGC-----AGTTTT--TG-AA-----GGA----TGGTA--C---T----------------------T-CTACTC---AA-----GCTAA-T---TTT--------------------CAA--TATACT--T
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              153154 50 +    277961 GA--------ATATT--TG-CA-----GAA----TACTA--T---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------CAT-TTTCAAT--G
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      286627 53 -    477199 GGGC-----AATATT--TG-CA-----GAA----TACTG--T---C----------------------T-CTACTC---AA-----GTGTT-T---TTT-------------------C-AT-GTATAGT--G
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959               3900 53 +     26078 CGGC-----AACATT--TG-CA-----GAA----TACTG--T---T----------------------T-CTACTC---AA-----GTGTT-T---TTT-------------------C-AT-GTATAAT--G
i Hipposideros_galeritus.HipGal_scaffold_52959          C 0 C 0
s Hoolock_leuconedys.ctg79                                     10794 53 -   7690867 GGGC-----TATATT--TG-CA-----AAA----TACTA--T---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------TAT-TTACAAG--G
i Hoolock_leuconedys.ctg79                                 I 50 I 6
s Hyaena_hyaena.HyaHya_flattened_line_20729                 25509 53 -     67322 GGGC-----AATATT--TA-CA-----GAA----TACTA--T---T----------------------T-CTACTC---AA-----ACATA-T---TTT--------------------GAT-TTACAAC--A
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           23431 47 -    119109 ---T-----AACATT--TG-TA-----GGC----T---A--C---T----------------------T-CCACTT---GA-----TTATG-T---TTT--------------------CAT-TTACACT--G
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_1620906                              298 53 -     33653 GGGC-----TATATT--TG-CA-----AAA----TACTA--T---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------TAT-TTACAAG--G
i Hylobates_abbotti.k141_1620906                        I 45 N 0
s Hylobates_agilis.k141_1136966                              1370 53 +      9785 GGGC-----TATATT--TG-CA-----AAA----TACTA--T---T----------------------C-CTACTC---AA-----GCATA-T---TTT--------------------TAT-TTACAAG--G
i Hylobates_agilis.k141_1136966                         I 46 C 0
s Hylobates_klossii.k141_468230                              4850 53 +      5464 GGGC-----TATATT--TG-CA-----AAA----TACTA--T---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------TAT-TTACAAG--G
i Hylobates_klossii.k141_468230                         I 46 C 0
s Hylobates_pileatus_b.ContigUN                                 14630196 53 -  25970782 GGGC-----TATATT--TG-CA-----AAA----TACTA--T---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------TAT-TTACAAG--G
i Hylobates_pileatus_b.ContigUN                                I 46 C 0
s Hylobates_muelleri.k141_1139146                            2747 53 +      4161 GGGC-----TATATT--TG-CA-----AAA----TACTA--T---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------TAT-TTACAAG--G
i Hylobates_muelleri.k141_1139146                       I 46 C 0
s Hystrix_cristata.HysCri_scaffold_50788                    11715 53 +     22540 GGCC-----AATATT--TG-AA-----GGA----TCATC--T---T----------------------T-CTACTT---TA-----TTGTA-G---TTC--------------------TGT-TTACAAT--G
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7131976 53 +  13083262 GATT-----AATATT--TG-CA-----GAA----TGCTC--T---C----------------------T-CTACTC---AA-----GCATG-T---TTT--------------------CAT-TTACAAT--G
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   3209 53 +      3484 GGGT-----AATATT--TG-CA-----GAA----TACTA--C---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------CAT-TTACAGT--G
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              15298 53 +     17520 GAGC-----AATACT--TG-CA-----GAA----TACTA--T---T----------------------T-CTGCTC---AA-----GCATA-T---TTT--------------------CAT-TTACAAG--G
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8580778 76 +  11848649 GGAA-----AATATT--TG-TA-----CAA----AGGTC--T---TTGT-GCTTAAGTATATTTTTGCT-CTGCTT---AA-----GTCTA-T---TTT--------------------CAC-CTACAGTGCA
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               29927 53 +     37189 GAGC-----AATACT--TG-CA-----GAA----TCCTA--T---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------CAT-TTACAAT--G
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          55625 52 -    147782 GGGT-----CATATC--TG-CA-----AAA----CACTA--T---T----------------------T-CTACTC---AA-----GC-TA-T---TTT--------------------TAT-TTACAAG--A
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    8989 54 +     26176 GAGC-----AATATA--TG-CA-----GAC----TACTA--T---T----------------------G-CTACCC---AA-----GCACA-T---TTT--------------------TTTTCTATCAC--G
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258413029 53 - 285822530 GGGT-----AATATT--TG-CA-----GAA----TACTA--C---T----------------------T-CTACTG---AA-----GCATA-T---TTT--------------------CAT-TTACAAT--G
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        30350 53 +     39228 GGGT-----AATATT--TG-CA-----GAA----TACTG--T---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------CAT-TTACAAT--G
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            59714 53 +     63517 GGGT-----AATATT--TG-CA-----GAA----TACTG--T---T----------------------T-CTACTC---AA-----GCATA-C---TTT--------------------CAT-TTACAAT--G
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        38095 53 -     38897 GGGT-----AATATT--TG-CA-----GAA----TACTA--T---T----------------------T-CTACTT---AA-----GCATA-T---TTT--------------------CAT-TTACAAC--G
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      4140 53 -     13103 GGGT-----AATATT--TG-CA-----GAA----TACTG--T---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------CAT-TTACAAT--G
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3094345 53 -   3498232 GGGA-----AATATC--TG-TA-----GAA----TACTA--T---T----------------------T-CTACTC---AA-----ACATG-T---TTC--------------------CAT-TTACAAC--A
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_470947                     366 52 -      1692 G-AC-----AATATT--TG-AA-----GAA----TACTA--T---T----------------------T-CTATTC---AA-----GCCTA-C---TTG--------------------TAT-TTACTAT--G
i Lepus_americanus.LepAme_scaffold_470947               I 150 C 0
s Lipotes_vexillifer.KE558548.1                            142220 53 +   3060487 GAGC-----AATACT--TG-CA-----GAA----TACTA--T---T----------------------T-CTACTC---AA-----CCATA-T---TTT--------------------CAT-TTACAAT--G
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19254094 53 +  19376315 GGGC-----TCTCTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTC---AA-----ACATA-T---TTT--------------------TAT-TTACAAA--G
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           16864 53 +     84689 GGGT-----AATACT--TG-CA-----GAA----TACTA--T---T----------------------T-CTACTC---AA-----GCATG-T---TTT--------------------CAT-TTACAAT--G
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3784597 53 +   6799190 GGGT-----AATACT--TG-CA-----GAA----TACTA--T---T----------------------T-CTACTC---AA-----GCATG-T---TTT--------------------CAT-TTACAAT--G
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20600931 53 -  62548349 GAGC-----AATATT--TG-AA-----TTA----TAGTA--C---T----------------------T-TTACTC---AA-----ACATA-T---TTT--------------------CAT-TTACATT--G
i Loxodonta_africana.GL010040.1                         I 16 C 0
s Lycaon_pictus.CM007556.1                               11097594 53 +  39895028 GGGC-----AATTTC--TG-TA-----GAA----TACTA--T---T----------------------T-CTActc---aa-----acatg-t---ttt--------------------tat-ttgcaaa--a
i Lycaon_pictus.CM007556.1                              I 38 C 0
s Macaca_arctoides.k141_2201161                             25843 53 +     74745 GGGC-----TCTGTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTC---AA-----GCATG-T---TTT--------------------TAT-TTACAAA--G
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12712306 53 +  12821369 GGGC-----TCTGTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTC---AA-----GCATG-T---TTT--------------------TAT-TTACAAA--G
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                4879 53 -     26467 GGGC-----TCTGTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTC---AA-----GCATG-T---TTT--------------------TAT-TTACAAA--G
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           52750 53 +     63263 GGGC-----TCTGTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTC---AA-----GCATG-T---TTT--------------------TAT-TTACAAA--G
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 4860 53 -     26361 GGGC-----TCTGTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTC---AA-----GCATG-T---TTT--------------------TAT-TTACAAA--G
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_2667654                                1163 53 -      5626 GGGC-----TCTGTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTC---AA-----GCATG-T---TTT--------------------TAT-TTACAAA--G
i Macaca_leonina.k141_2667654                           C 0 C 0
s Macaca_maura.k141_251854                                  51279 53 -     79256 GGGC-----TCTGTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTC---AA-----GCATG-T---TTT--------------------TAT-TTACAAA--G
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196041377 53 + 196197964 GGGC-----TCTGTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTC---AA-----GCATG-T---TTT--------------------TAT-TTACAAA--G
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11451547 53 +  11645122 GGGC-----TCTGTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTC---AA-----GCATG-T---TTT--------------------TAT-TTACAAA--G
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                  10233 53 -     46448 GGGC-----TCTGTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTC---AA-----GCATG-T---TTT--------------------TAT-TTACAAA--G
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                7895 53 -     13212 GGGC-----TCTGTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTC---AA-----GCATG-T---TTT--------------------TAT-TTACAAA--G
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 21576 53 -     55006 GGGC-----TCTGTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTC---AA-----GCATG-T---TTT--------------------TAT-TTACAAA--G
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43846998 53 +  43892939 GGGC-----TCTGTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTC---AA-----GCATG-T---TTT--------------------TAT-TTACAAA--G
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               22861 53 -     24607 GGGC-----TCTGTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTC---AA-----GCATG-T---TTT--------------------TAT-TTACAAA--G
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                              10230 53 -     27140 GGGC-----TCTGTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTC---AA-----GCATG-T---TTT--------------------TAT-TTACAAA--G
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                704306 37 +    802869 -------------------------------------TA--T---T----------------------T-CTACTC---AT-----GCATT-T---TTT----------------AAAATAT-TTATAAT--G
i Macroglossus_sobrinus.MacSob_scaffold_879             I 7 C 0
s Mandrillus_leucophaeus.scaffold125                     43443263 53 -  43563597 GGGC-----TCTCTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTC---AA-----ACATA-T---TTT--------------------TAT-TTACAAA--G
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4456062 53 -   4543643 GGGC-----TCTCTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTC---AA-----ACATA-T---TTT--------------------TAT-TTACAAA--G
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            154610 26 +    252755 ------------------------------------------------------------------------Actc---aa-----acatc-t---ttt--------------------cat-ttacaaT--C
i Manis_javanica.JSZB01003966.1                         I 23 C 0
s Manis_pentadactyla.KN017078.1                             42209 26 +     58827 ------------------------------------------------------------------------Actc---aa-----acatc-t---ttt--------------------cat-ttacaaT--C
i Manis_pentadactyla.KN017078.1                         I 23 C 0
s Marmota_marmota.CZRN01000005.1                         36879842 53 +  64221397 GAGT-----AATATT--TG-CA-----GAA----TGCTC--T---C----------------------T-CTACTC---AA-----GCATG-T---TTT--------------------CAT-TTACAAT--G
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       68105 57 -    234502 GGGC-----AAAATT--TG-CA-----GGA----TACGA--T---T----------------------T-CTACTC---AA-----GCCTT-T---CTATTTT----------------CAT-TTATAAT--A
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             8999 53 -     87323 GGGA-----AATACC--TG-TA-----GAA----TACTA--T---T----------------------T-CTACTC---AA-----GCATG-T---TTC--------------------CAT-TTTCAAA--G
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 3805 55 +    115071 GGAA-----AATATTTTTG-CA-----CAA----AGCCA--T---T----------------------A-CTGCTG---AA-----GTTTA-T---TTT--------------------CGT-TTACAAT--G
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1053443 54 -  26018355 aaaa-----aatatt-ttg-ca-----aaa----acCCA--T---T----------------------A-CTGCTG---AA-----GTTTA-C---TTT--------------------CAT-TTACATT--G
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    4889 53 -     12939 GAGC-----AATACT--TG-CA-----GAA----TACTA--T---T----------------------T-CTATTC---AA-----GCATA-T---TTT--------------------CAT-TTACAAT--G
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16516069 53 +  47401472 GCGT-----AATATT--TA-CA-----GAA----TACCA--T---T----------------------T-CTActt---aa-----gcata-t---ttt--------------------cat-ttacaaT--G
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  47123 28 -     48017 ----------------------------------------------------------------------CTGTGC---AA-----GCATA-T---TTT--------------------GAC-TTGCATT--G
i Microgale_talazaci.MicTal_scaffold_34660              I 70 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               27240 53 -     32043 GGTC-----ACTATT--TG-CA-----GCA----TACTA--T---T----------------------T-CTACTT---GA-----GCACA-T---TTT--------------------CAT-TTATAAT--G
i Micronycteris_hirsuta.MicHir_scaffold_37978           I 50 C 0
s Microtus_ochrogaster.CM001673.1                        22826420 40 -  98408828 ---------------------A-----AAA----AGCCA--A---T----------------------A-CTGTTG---AA-----GCTTA-T---TTT--------------------CAT-TTACAAT--T
i Microtus_ochrogaster.CM001673.1                       I 13 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8215617 53 +  10048721 GGGC-----AATATT--TG-CA-----GAA----TACTA--T---T----------------------T-CTACTG---GA-----GCACA-T---TTT--------------------CAT-TTAGAAT--G
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            40076 53 +     45743 GGGC-----AATATT--TG-CA-----GAA----TACTA--T---T----------------------T-CTACTG---GA-----GCACA-T---TTT--------------------CAT-TTAGAAT--G
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         7813 53 +     29742 GGGC-----TATGTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTC---AA-----GCATG-T---TTT--------------------TAT-TTACAAA--G
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        19747 53 -    104932 AGGA-----AATATC--TG-TA-----GAA----TACTA--T---T----------------------T-CTACTC---AA-----ACATG-T---TTC--------------------CAT-TTACAGC--A
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     6763 53 -     12809 GGGT-----AATATT--TA-CA-----GAA----TACTA--T---T----------------------T-CTACTT---AA-----GCATA-T---TTT--------------------CTT-TTACAAT--G
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 152664 53 +    154973 GAGC-----AATACT--TC-CA-----GAA----TACTA--T---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------CAT-TTACAAT--G
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                165761 53 +    265003 GGGT-----ACTATT--TG-CA-----GAA----CACTA--T---T----------------------T-CTACTT---GA-----GCACA-T---TTT--------------------CGC-TTATAAT--G
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  9447 53 -     19904 GGGC-----AATACT--TG-CA-----GAA----TACTG--T---T----------------------T-CTACTG---AA-----GTATA-T---TTC--------------------CAT-TTACAAT--G
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  152799 53 -    168139 AGGC-----AATATT--TA-CA-----GAA----TACTA--T---T----------------------T-CAACCC---AA-----ACATA-T---TTT--------------------GAT-TTACAAC--A
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          26601 53 -    100666 GAGC-----AATATT--TG-CA-----GAA----TACTA--T---T----------------------G-CTACTT---GA-----GCACA-T---TTT--------------------TAT-TTATCAT--G
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70773687 55 +  92629107 ggaa-----aatatttttt-taa-----aa----agcca--t---t----------------------a-ctgctg---aa-----gttta-t---ttt--------------------cat-ttacagt--g
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75495748 55 +  98207768 ggaa-----aatatttttt-tta-----aa----agcca--t---t----------------------a-ctgctg---aa-----gttta-t---ttt--------------------cat-ttacaat--G
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67562476 60 +  89017189 ggaa-----aatattttac-aaaaaaaaaa----aaaca--t---t----------------------a-ctgctg---aa-----gttta-t---ttt--------------------cat-ttacagt--g
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74338469 38 +  97876770 ----------------------------aa----agcca--t---t----------------------a-CTGctg---aa-----gttta-t---ttt--------------------cat-ttacagt--g
i Mus_spretus.CM004110.1                                I 12 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             17097 53 +     98495 GGAA-----AATATT--TG-CA-----TTA----TGGTC--T---T----------------------T-CTACTC---AA-----ACACA-T---TTA--------------------AAT-TTATGAT--A
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4431089 56 -  28371801 GGGA-----AATACC--TG-TA-----GAA----TACTA--T---T----------------------T-CAACTCAACAA-----GCATG-T---TTC--------------------CAT-TTTCAAC--A
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     98174 50 -    117718 GGAC-----AAAGTG--GG-CG-----GGG----T---C--C---T----------------------T-CCACTT---TA-----ATGTA-T---TTT--------------------TTC-TCACACT--G
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               973622 53 +   8389877 gagc-----aatatt--tg-aa-----aaa----tacta--t---T----------------------G-CTACtc---aa-----gcaca-t---ttt--------------------tat-ttatcat--g
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5024698 53 +   6462685 GAGC-----AATATT--TG-CA-----GAA----TACTA--T---T----------------------G-CTACtc---aa-----gcaca-t---ttt--------------------tat-ttatcat--g
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3471119 53 -   3747815 GAGC-----AATATT--TG-CA-----GAA----TACTA--T---T----------------------G-CTACTc---aa-----gcaca-t---ttt--------------------tat-ttatcat--g
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        16356 53 +     66751 GAGC-----AATATT--TG-CA-----GAA----TACTA--T---T----------------------G-CTACTC---AA-----GCACA-T---TTT--------------------TAT-TTATCAT--G
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_12795               718 53 -     87886 GGGC-----AATTTT--TG-CA-----GAA----CATTA--T---T----------------------T-CTGCTC---AA-----GCTTA-T---TTT--------------------CAT-TTACAAT--G
i Myrmecophaga_tridactyla.MyrTri_scaffold_12795         I 139 C 0
s Nannospalax_galili.KL201303.1                            126157 53 +    362372 GGAG-----AATATTT-TG-CA-----AGA----AACCA--T---T----------------------T-CCACTT---AA-----GTTTA-T---TTT---------------------GT-TTGCAAT--G
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                              12074 53 +     48152 GGGC-----TATGTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------TAT-TTACAAA--G
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4493138 53 -  14209539 GGGA-----AATATC--TG-TA-----GAA----TACTA--T---T----------------------T-CTACTC---AA-----ACGTG-T---TTC--------------------CAT-TTACAAC--A
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3957255 53 -   4490290 GAGC-----AATACT--TC-CA-----GAA----TACTA--T---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------CAT-TTACAAT--G
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  53074 53 +     94413 TGGC-----ACTATT--TG-CA-----GAA----TATTA--C---T----------------------T-CTACTT---GA-----GCACA-T---ttt--------------------cat-tgttaat--g
i Noctilio_leporinus.NocLep_scaffold_12062              I 50 C 0
s Nomascus_annamensis.k141_881190                             181 53 -      2113 GGGC-----TATATT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------TAT-TTACAAG--G
i Nomascus_annamensis.k141_881190                       I 50 C 0
s Nomascus_concolor.k141_256540                              8478 53 -      8966 GGGC-----TATATT--TG-CA-----AAA----TACTA--T---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------TAT-TTACAAG--G
i Nomascus_concolor.k141_256540                         I 46 C 0
s Nomascus_gabriellae.k141_202556                             240 53 -      1580 GGGC-----TATATT--TG-CA-----AAA----TACTA--T---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------TAT-TTACAAG--G
i Nomascus_gabriellae.k141_202556                       I 46 C 0
s Nomascus_siki_b.tarseq_453                             7731 53 +     12787 GGGC-----TATATT--TG-CA-----AAA----TACTA--T---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------TAT-TTACAAG--G
i Nomascus_siki_b.tarseq_453                        I 131 C 0
s Nomascus_siki_a.k141_421408                                  2333 53 +     16235 GGGC-----TATATT--TG-CA-----AAA----TACTA--T---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------TAT-TTACAAG--G
i Nomascus_siki_a.k141_421408                             I 46 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                40471 53 +   3668941 GGGC-----AATTTC--TG-TA-----GAA----TACTA--T---T----------------------T-CTActc---aa-----acatg-t---ttt--------------------tat-ttgcaAA--A
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65573653 53 -  95554990 GGGT-----AATATT--TG-CA-----GAA----TACTA--T---T----------------------T-CTACTC---AA-----GCATG-T---TTT--------------------CAT-TTACAAT--G
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_6040852                            1289 53 +      1868 GGGT-----AATATT--TG-CA-----GAA----TACTA--T---T----------------------T-CTACTC---AA-----GCATG-T---TTT--------------------CAT-TTACAAT--G
i Nycticebus_coucang.k141_6040852                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65681835 53 +  89412551 GGGT-----AATATT--TG-CA-----GAA----TACTA--T---T----------------------T-CTACTC---AA-----GCATG-T---TTT--------------------CAT-TTACAAT--G
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            5001682 47 -  23139505 GAGC-----AATATT--TG-AA-----GAA----TACCA--T---G----------------------A-CTATTC---AA-----GCATA-C---TTT--------------------CAC-TT--------
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3693315 53 +  10294119 GGGC-----AATATT--GG-TA-----GAA----T---C--C---T----------------------T-CCactg---ta-----ctgta-t---ttt-----------------tttttc-ctgcact--g
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             687388 53 -   3126709 GGGA-----AATATC--TG-TA-----GAA----TACTA--T---T----------------------T-CTACTC---AA-----ACATG-T---TTC--------------------CAT-TTACAAC--A
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1086437 53 +   1425656 GGGC-----AATATT--TG-TA-----GAA----TACTG--T---T----------------------T-CTACTG---AA-----GTATA-T---TTC--------------------CAT-TTACAAT--G
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         44509 53 +     78940 GGGC-----AATATT--TT-CA-----GAA----TACTG--T---T----------------------T-CCACTG---AA-----GTATA-T---TTC--------------------CAT-TTACAAT--G
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  132213 54 +    145789 GAAA-----AATATTT-CA-CA-----AAA----AGCCA--A---T----------------------A-CTGCTG---AA-----GCTTA-T---TTT--------------------CAT-TTACAAA--G
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  45155 54 +     62360 GAAA-----AGTACTT-TG-CA-----AAA----AGCCA--T---T----------------------A-CTGCTG---AA-----GTGTA-T---TTT--------------------CAT-TTGCAAT--G
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7230929 53 -   7562323 GAGC-----AATACT--TC-CA-----GAA----TACTA--T---T----------------------T-CTACTC---aa-----gcata-t---ttt--------------------cat-ttacaaT--G
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_371885              2147 54 +      3658 GGGC-----AATATT--TG-AA-----GAA----AAGTA--C---T----------------------TAATGCTT---AA-----GCCTT-G---TTT--------------------CAT-TTAGACT--G
i Orycteropus_afer.OryAfe_flattened_line_371885         C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141885637 52 + 163896628 G-AC-----AATATT--TG-AA-----GAA----TACGA--T---T----------------------T-CTATGC---AA-----GCCTA-C---TTG--------------------TAT-TTACTAT--G
i Oryctolagus_cuniculus.CM000803.1                      I 8 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      317603 53 -    505867 GGGC-----AATTTC--TG-TA-----GAA----TACTA--T---T----------------------T-CTActc---aa-----acatg-t---ttt--------------------tat-ttgcaGA--A
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        6782 53 -     53940 GTGT-----AGTATT--TG-CA-----GAA----TACTA--T---T----------------------T-CTACTC---AA-----GCATG-T---TTT--------------------CAT-TTACAAT--G
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18014747 53 -  38779656 GTGT-----AGTATT--TG-CA-----GAA----TACTA--T---T----------------------T-CTACTC---AA-----GCATG-T---TTT--------------------CAT-TTACAAT--G
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134085652 53 - 275406953 GGGC-----AATATT--TG-CA-----GAA----TACTG--t---t----------------------t-atactt---aa-----atata-t---ttt--------------------cat-ttacaat--G
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      86904 53 +    140051 GGGC-----AATATT--TG-CA-----GAA----TACTG--T---T----------------------T-CTACTT---AA-----ATATA-T---TTT--------------------CAT-TTACAAT--G
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127580155 53 - 205426864 GGGC-----TATATT--TG-CA-----AAA----TACTA--T---T----------------------T-CTACtc---aa-----gcata-t---ttt--------------------tat-ttacaag--g
i Pan_paniscus.CM003386.1                               C 0 I 6
s Pan_troglodytes.CM009241.2                            120157316 53 - 196562556 GGGC-----TATATT--TG-CA-----AAA----TACTA--T---T----------------------T-CTACtc---aa-----gcata-t---ttt--------------------tat-ttacaag--g
i Pan_troglodytes.CM009241.2                            C 0 I 6
s Panthera_onca.PanOnc_flattened_line_1615                  42365 53 +    295523 GGGC-----AATATT--TA-CA-----CAA----TACTA--T---T----------------------T-CTACTC---AA-----ACATA-T---TTT--------------------GAC-TTACAAT--A
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3646179 53 +  18214204 GGGC-----AATATT--TA-CA-----CAA----TACTA--T---T----------------------T-CTACTC---AA-----ACATA-T---TTT--------------------GAC-TTACAAT--A
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5035816 53 -   6340057 GGGC-----AATATT--TA-CA-----CAA----TACTA--T---T----------------------T-CTACTC---AA-----ACATA-T---TTT--------------------GAC-TTACAAT--A
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1074543 53 -   1292953 GGGC-----AATATT--TG-CA-----GAA----TACTG--T---T----------------------T-ctactt---aa-----atata-t---ttt--------------------cat-ttacaaT--G
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188162055 53 - 188283584 GGGC-----TCTCTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTactc---aa-----acata-t---ttt--------------------tat-ttacaaa--g
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              5145 53 +     25005 GGGC-----TCTCTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTC---AA-----ACATA-T---TTT--------------------TAT-TTACAAA--G
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47519427 53 +  47705337 GGGC-----TCTCTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTC---AA-----ACATA-T---TTT--------------------TAT-TTACAAA--G
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 73420 53 -    104429 GGGC-----TCTCTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTC---AA-----ACATA-T---TTT--------------------TAT-TTACAAA--G
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   11950 53 +     14967 GGGC-----TCTCTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTC---AA-----ACATA-T---TTT--------------------TAT-TTACAAA--G
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_899489                                   620 53 -     13896 GGGC-----TCTCTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTC---AA-----ACATA-T---TTT--------------------TAT-TTACAAA--G
i Papio_ursinus.k141_899489                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    123831 53 -    135482 GGGC-----AATATT--TA-CA-----GAA----TACTA--T---T----------------------T-CTACCC---AA-----ACATA-A---TTT--------------------GAT-TTATAAC--A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          12437 53 -     23713 GAGT-----AATATT--TG-CA-----GAA----TACTA--T---T----------------------T-CTACTC---AA-----GCTTG-T---TTT--------------------CAT-TTACAAT--G
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           13588 53 +     61070 GGGT-----AATATT--TG-CA-----GAA----TACTA--T---T----------------------T-CTACTC---AA-----GCTTG-T---TTT--------------------CAT-TTACAAT--G
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       3888 29 +     49596 --------------------------------------------------------------------T-ATGTTC---AA-----GCTTA-T---TTG--------------------CTT-TCCAAAC--A
i Perognathus_longimembris.PerPac_flattened_line_19359  I 21 C 0
s Peromyscus_maniculatus.KI615458.1                       2840969 54 -   3366660 GAAA-----AGTACTT-TG-CA-----AAA----AGCCA--T---T----------------------A-CTGCTG---AA-----GTGTA-T---TTT--------------------CAT-TTACAAT--G
i Peromyscus_maniculatus.KI615458.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    19746 30 -     36578 ---------------------------------------------T----------------------T-CAACTT---TA-----TTGTA-T---TTT--------------------TGT-TTATAAT--G
i Petromus_typicus.PetTyp_scaffold_33007                I 22 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              5389 53 +      8220 GAGC-----AATACT--TC-CA-----GAA----TACTA--T---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------CAT-ATACAAT--G
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Piliocolobus_badius.k141_1987485                           5608 53 -      5908 GGGC-----TATGTT--TG-CA-----AAA----TACCG--T---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------TAT-TTACAAA--G
i Piliocolobus_badius.k141_1987485                      I 47 C 0
s Piliocolobus_gordonorum.k141_1270531                       6227 53 -     17985 GGGC-----TATGTT--TG-CA-----AAA----TACCG--T---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------TAT-TTACAAA--G
i Piliocolobus_gordonorum.k141_1270531                  I 47 C 0
s Piliocolobus_kirkii.k141_929665                            5594 53 +      7694 GGGC-----TATGTT--TG-CA-----AAA----TACCG--T---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------TAT-TTACAAA--G
i Piliocolobus_kirkii.k141_929665                       I 47 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26744077 53 +  26888534 GGGC-----TATGTT--TG-CA-----AAA----TACCG--T---T----------------------T-CTACtc---aa-----gcata-t---ttt--------------------tat-ttacaaa--g
i Piliocolobus_tephrosceles.PDMG02000036.1              I 47 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306           101852 53 +    112873 AAGC-----AATATT--TG-CA-----GAA----TACTA--T---T----------------------G-TTACTC---AA-----GTACA-T---TTT--------------------TAT-TTATCAT--T
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             45775 52 -     61926 GGGT-----CATATT--TG-CA-----AAA----TACTA--T---T----------------------T-CTACTC---AA-----GT-TA-T---TTT--------------------TAT-TTACAAG--A
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        27151 52 +     78826 GGGT-----CATATT--TG-CA-----AAA----TACTA--T---T----------------------T-CTACTC---AA-----GT-TA-T---TTT--------------------TAT-TTACAAG--A
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                             11206 52 -     15800 GGGT-----CATATT--TG-CA-----AAA----TACTA--T---T----------------------T-CTACTC---AA-----GT-TA-T---TTT--------------------TAT-TTACAAG--A
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        14405 52 -     16101 GGGT-----CATATT--TG-CA-----AAA----TACTA--T---T----------------------T-CTACTC---AA-----GT-TA-T---TTT--------------------TAT-TTACAAG--A
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          7634 52 +      9673 GGGT-----CATATT--TG-CA-----AAA----TACTA--T---T----------------------T-CTACTC---AA-----GT-TA-T---TTT--------------------TAT-TTACAAG--A
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13476627 52 -  19735023 GGGT-----CATATT--TG-CA-----AAA----TACTA--T---T----------------------T-CTACTC---AA-----GT-TA-T---TTT--------------------TAT-TTACAAG--A
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           15537 52 -     31692 GGGT-----CATATT--TG-CA-----AAA----TACTA--T---T----------------------T-CTACTC---AA-----GT-TA-T---TTT--------------------TAT-TTACAAG--A
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990          11897 53 +     21690 GAGC-----AATACT--TG-CA-----GAA----TACTA--T---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------CAT-TTACAAT--G
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       27713 52 +     44506 GGGC-----CATATT--TA-CA-----AAA----TACTA--T---T----------------------T-CTACTC---AA-----GC-TA-T---TTT--------------------TAT-TTACAAG--A
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        27926 52 +     67491 GGGC-----CATATT--TA-CA-----AAA----TACTA--T---T----------------------T-CTACTC---AA-----GC-TA-T---TTT--------------------TAT-TTACAAG--A
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      18165 52 -     98129 GGGC-----CATATT--TA-CA-----AAA----TACTA--T---T----------------------T-CTACTC---AA-----GC-TA-T---TTT--------------------TAT-TTACAAG--A
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     27766 52 +    147771 GGGC-----CATATT--TA-CA-----AAA----TACTA--T---T----------------------T-CTACTC---AA-----GC-TA-T---TTT--------------------TAT-TTACAAG--A
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         4401 52 -     43940 GGGC-----CATATT--TA-CA-----AAA----TACTA--T---T----------------------T-CTACTC---AA-----GC-TA-T---TTT--------------------TAT-TTACAAG--A
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          8484 52 -     55515 GGGC-----CATATT--TA-CA-----AAA----TACTA--T---T----------------------T-CTACTC---AA-----GC-TA-T---TTT--------------------TAT-TTACAAG--A
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         27838 52 +    152463 GGGC-----CATATT--TA-CA-----AAA----TACTA--T---T----------------------T-CTACTC---AA-----GC-TA-T---TTT--------------------TAT-TTACAAG--A
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       5642 52 -    119457 GGGC-----CATATT--TA-CA-----AAA----TACTA--T---T----------------------T-CTACTC---AA-----GC-TA-T---TTT--------------------TAC-TTACAAG--A
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         17560 52 +    134592 GGGC-----CATATT--TA-CA-----AAA----TACTA--T---T----------------------T-CTACTC---AA-----GC-TA-T---TTT--------------------TAT-TTACAAG--A
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          28148 52 -     75465 GGGC-----CATATT--TA-CA-----AAA----TACTA--T---T----------------------T-CTACTC---AA-----GC-TA-T---TTT--------------------TAT-TTACAAG--A
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              192783 53 -    373494 GGGC-----TATATT--TG-CA-----AAA----TACTA--T---T----------------------T-CTACTc---aa-----gcata-t---ttt--------------------tat-ttacaag--g
i Pongo_abelii.NDHI03003816.1                           I 46 C 0
s Pongo_pygmaeus.ctg62                                   19813436 53 +  19899266 GGGC-----TATATT--TG-CA-----AAA----TACTA--T---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------TAT-TTACAAG--G
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               9356 53 -     15069 GGGC-----TATGTT--TG-CA-----AAA----CACTG--T---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------TAT-TTACAAA--G
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              9471 53 +     14865 GGGC-----TATGTT--TG-CA-----AAA----CACTG--T---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------TAT-TTACAAA--G
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                6474 52 -      9567 GAGC-----AATTTT--TG-AA-----GGG----TGGTA--C---T----------------------T-CTACTC---AA-----GCTCA-T---TTT--------------------CAA--TATACT--T
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6854405 53 +  12164890 GGGT-----AATATT--TG-CA-----GAA----TACTA--C---T----------------------T-CTACTG---aa-----gcata-t---ttt--------------------cat-ttacaat--g
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    673979 53 -   2312742 GGGT-----AATATT--TG-CA-----GAA----TACTA--C---T----------------------T-CTACTC---aa-----gcata-t---ttt--------------------cat-ttacagT--G
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         9503 53 +     11805 GGTT-----AATATT--TG-CA-----GAA----TACTA--C---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------CAT-TTACAGT--G
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           48839 41 +     52369 TGAT-----AATATT--TG-CA-----GAA----TAGTA--C---T----------------------T-CTACTC---AA-----GCATA-T---TT-----------------------------------
i Propithecus_diadema.k141_577245                       C 0 I 6
s Propithecus_edwardsi.k141_1317105                         41226 41 -     44753 TGAT-----AATATT--TG-CA-----GAA----TAGTA--C---T----------------------T-CTACTC---AA-----GCATA-T---TT-----------------------------------
i Propithecus_edwardsi.k141_1317105                     C 0 I 6
s Propithecus_perrieri.k141_7554                            23149 41 +     27322 TGAT-----AATATT--TG-CA-----GAA----TAGTA--C---T----------------------T-CTACTC---AA-----GCATA-T---TT-----------------------------------
i Propithecus_perrieri.k141_7554                        C 0 I 6
s Propithecus_tattersalli.k141_907138                       22795 53 -     53241 GGGT-----AATATT--TG-CA-----GAA----TACTA--C---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------CAT-TTACAGT--G
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         45058 53 -     48185 GGTT-----AATATT--TG-CA-----GAA----TACTA--C---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------CAT-TTACAGT--G
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           40781 55 +     77221 ggaa-----aatatttttg-ca-----aAA----AGCCA--T---T----------------------A-CTGCTG---AA-----GTTTA-T---TTT--------------------CAC-TTACAAT--G
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            8423 55 -     27784 GGGC-----ACTATT--TG-CA-----GAA----TACTATAT---T----------------------T-CTTctt---ga-----gcaca-t---ttt--------------------cat-ttatcat--g
i Pteronotus_parnellii.KE867983.1                       I 50 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        252744 53 -    344369 GGGA-----AATACC--TG-TA-----GAA----TACTA--T---T----------------------T-CTACTC---AA-----GCATG-T---TTC--------------------CAT-TTTCAAC--A
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13249397 58 -  17261082 GGGC-----AATATT--TG-CA-----GAA----TACTA--T---T----------------------T-Ctactt---at-----gcatt-t---ttt---------------ttatatat-ttataat--a
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             607348 58 -   3946241 GGGC-----AATATT--TG-CA-----GAA----TACTA--T---T----------------------T-Ctactt---at-----gcatt-t---ttt---------------ttatatat-ttataat--a
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131542506 53 - 161321710 GGGC-----AATATT--TA-CA-----GAA----TACTA--T---T----------------------T-CTACTC---AA-----ACATA-T---TTT--------------------GAC-TTACAAC--A
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             33462 53 +     56732 GGGC-----TATGTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------TAT-TTACAAA--G
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6809959 53 +   6970761 GGGC-----TATGTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------TAT-TTACAAA--G
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             9348 53 +     18040 GGGC-----TATGTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------TAT-TTACAAA--G
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                23285 53 +     68503 GGGC-----AATATT--TG-TA-----GAA----TACTG--T---T----------------------T-CTACTG---AA-----GTATA-T---TTC--------------------CAT-TTACAAT--G
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13921170 59 +  90463843 GGAA-----AATAGTTTTG-CA-AAAAAAA----AGCCA--T---T----------------------G-TTGCTG---aa-----gttta-t---ttt--------------------cat-ttgcagT--G
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1795229 53 +   2252614 GGGC-----AATATT--TG-CA-----GAA----TACTA--T---T----------------------T-CTACtc---aa-----gcatt-t---ttt-------------------c-at-atttaat--g
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                            3727 53 -     17045 GGGC-----TATGTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------TAT-TTACAAA--G
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206381214 53 - 206558726 GGGC-----TATGTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTactc---aa-----acata-t---ttt--------------------tat-ttacaaa--g
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44860117 53 -  45163003 GGGC-----TATGTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------TAT-TTACAAA--G
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                22741 73 +    109198 GGGC-----AATATT--TG-CA-----GAA----TACTA--T---T----------------------T-CTACTC---AT-----GCTTT-T---TTTTTTTTTTTTTTTTTTTTTTGCAT-TTATAAT--G
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                      4171 53 -      4338 GGGC-----ATTATT--TG-TA-----GAA----TACTG--T---T----------------------T-CTACTT---AA-----ATATA-T---TTT--------------------CAT-TTACAAT--G
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15678158 52 -  43202129 GGGC-----CATATT--CG-CA-----AAT----TACTA--C---T----------------------T-CTACTt---aa-----gc-ta-t---ttt--------------------tat-ttacaag--A
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                       10072 52 +     34089 GGGC-----CATATT--CG-CA-----AAA----TACTA--C---T----------------------T-CTACTT---AA-----GC-TA-T---TTT--------------------TAT-TTACAAG--A
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                             10011 52 -     60842 GGGC-----CATATT--CG-CA-----AAA----TACTA--C---T----------------------T-CTACTT---AA-----GC-TA-T---TTT--------------------TAT-TTACAAG--A
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                             10105 52 +     67014 GGGC-----CATATT--CG-CA-----AAA----TACTA--C---T----------------------T-CTACTT---AA-----GC-TA-T---TTT--------------------TAT-TTACAAG--A
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                             10082 52 +     60816 GGGC-----CATATT--CG-CA-----AAA----TACTA--C---T----------------------T-CTACTT---AA-----GC-TA-T---TTT--------------------TAT-TTACAAG--A
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                10019 52 -     76454 GGGC-----CATATT--CG-CA-----AAA----TACTA--C---T----------------------T-CTACTT---AA-----GC-TA-T---TTT--------------------TAT-TTACAAG--A
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17346791 52 -  30362882 GGGC-----CATATT--TG-CA-----AAA----TACTA--C---T----------------------T-CTACTC---AA-----GC-TA-T---TTT--------------------TAT-TGACAGG--A
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         26112 52 -     62485 GGGC-----CATATT--TG-CA-----AAA----TACTA--C---T----------------------T-CTACTC---AA-----GC-TA-T---TTT--------------------TAT-TGACAGG--A
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   42023 52 -    114521 GGGC-----AGTATT--TG-CA-----GAG----TACTG--T---T----------------------T-CTCTTC---TA-----GCATG-T---TTT--------------------CAC-TTA-AAT--G
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        6963 53 +     15331 GGGC-----TATGTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------TAT-TTACAAA--G
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      12338 53 +     20762 GGGC-----TATGTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------TAT-TTACAAA--G
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         122342 53 +    130994 GGGC-----TATGTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------TAT-TTACAAA--G
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           41122 53 +     46263 GGGC-----TATGTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------TAT-TTACAAA--G
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     34267 53 +     42640 GGGC-----TATGTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------TAT-TTACAAA--G
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        17289 53 +     30600 GGGC-----TATGTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------TAT-TTACAAA--G
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  107331 53 -    120886 GAAA-----AATATTT-T--CA-----AAA----AGCCA--T---T----------------------A-CTGATG---AA-----GCTTA-T---TTT--------------------TAC-TTACAAC--G
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 I 37
s Solenodon_paradoxus.SolPar_flattened_line_1012            26672 53 +    739146 GGGC-----AGTATT--TC-CT-----GAA----CATTT--T---T----------------------T-CTGTTA---AA-----GCATA-G---TTT--------------------CAC-TCACAAA--G
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17777003 52 -  27805282 AGG------ACTAAT--TT-CA-----GAA----AACTA--T---T----------------------T-CTACTT---AA-----gcata-t---ttt--------------------cac-ttaaaat--t
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2245677 53 +   2842873 GATT-----AATATT--CG-CA-----GAA----TGCTC--T---C----------------------T-CTACTC---AA-----GCATG-T---TTT--------------------CAT-TTACAAT--G
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             241508 52 -    276980 TGAA-----AATAGC--TG-TA-----CAA----TATTA--T---T----------------------T-CTACTC---AG-----ACATG-T---TTC--------------------CAT-TT-CAAC--A
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            35703 53 +     62062 GGGC-----AATATT--TA-CA-----GAA----TACTA--T---T----------------------T-CAACCC---AA-----ACATA-T---TTT--------------------GAT-TTACAAC--A
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189277691 53 + 218635234 GGAC-----AATATT--TG-CT-----CAA----CACTA--T---T----------------------T-ATATTC---AA-----GCATA-G---TTT--------------------CAT-TTACAAT--G
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                4697 53 +     20549 GGGC-----AATATT--TG-CA-----GAA----TATTA--T---T----------------------T-CTATTC---AA-----GCACA-T---TTT--------------------TAT-TTATAAT--G
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               18952 53 +     45698 GGGC-----AATTTT--TG-CA-----GAA----CATTA--T---T----------------------T-CTGCTC---AA-----GCTTA-T---TTT--------------------CAT-TTACAAT--G
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      813301 53 +   1148477 TGGC-----AATATT--TG-CA-----GAG----TACTA--T---C----------------------T-CCACTC---AA-----GGATA-T---TTT--------------------GAT-TTACAAT--G
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  63937 53 +     99546 TGGC-----AATATT--TG-CA-----GAG----TACTA--T---C----------------------T-CCACTC---AA-----GGATA-T---TTT--------------------GAT-TTACAAT--G
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               32796 58 +     42269 gagc-----ttcatt--tc-ca-----gaa----tgcaa--g---g----------------------c-tgactc---aacgtatgcaag-t---caa--------------------taa-atgtaat--c
i Tarsius_lariang.k141_609102                           I 1327 C 0
s Theropithecus_gelada.CM009951.1                       194013588 53 - 194193292 GGGC-----TCTCTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTactc---aa-----acata-t---ttt--------------------tat-ttacaaa--g
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             40843 30 -     47444 ---------------------------------------------T----------------------T-CAACTT---TA-----CTGCA-T---TTT--------------------TGT-TTATTAT--G
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         I 22 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                  2097 25 -      3104 GGGT-----AATATT--TG-CA-----AAA----TACCA--A---T----------------------T----------------------------------------------------------------
i Tolypeutes_matacus.TolMat_scaffold_475685             C 0 I 13
s Tonatia_saurophila.TonSau_scaffold_3334                  140430 51 -    259118 GAGC-----ACTA----TG-CA-----GAA----GACTA--T---T----------------------T-CTACTT---GA-----GCGCA-T---TTT--------------------CAT-TTATCAT--G
i Tonatia_saurophila.TonSau_scaffold_3334               I 50 C 0
s Trachypithecus_auratus.k141_738098                        30610 53 +     38948 GGGC-----TATGTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------TAT-TTACAAA--G
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   24170 53 -     32910 GGGC-----TATGTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------TAT-TTACAAA--G
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      6071 53 -     12939 GGGC-----TATGTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------TAT-TTACAAA--G
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       5499 53 -     14244 GGGC-----TATGTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------TAT-TTACAAA--G
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           46892 53 -     54611 GGGC-----TATGTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------TAT-TTACAAA--G
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        4693 53 -     11566 GGGC-----TATGTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------TAT-TTACAAA--G
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     6877 53 -     15592 GGGC-----TATGTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------TAT-TTACAAA--G
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          5529 53 +     14371 GGGC-----TTTGTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------TAT-TTACAAA--G
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   3815 53 +     12481 GGGC-----TATGTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------TAT-TTACAAA--G
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        3796 53 -     24393 GGGC-----TATGTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------TAT-TTACAAA--G
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       8940 53 -     28054 GGGC-----TATGTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------TAT-TTACAAA--G
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44663724 53 -  44834318 GGGC-----TATGTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------TAT-TTACAAA--G
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       6036 53 +     13828 GGGC-----TATGTT--TG-CA-----AAA----TACTG--T---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------TAT-TTACAAA--G
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                  11770 53 +     90398 GGGC-----AATATT--TG-CA-----GAA----TACTG--T---T----------------------T-CTACTC---AA-----GGATA-T---TTT--------------------CAT-TTACAAT--G
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16092010 53 +  31416278 GAGC-----AATATT--TG-AA-----GAA----TAGTA--C---T----------------------T-CTACTC---aa-----gtata-t---ttt--------------------cat-ttacatt--g
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2802717 53 -   3938065 GGGT-----AATGTT--TG-CA-----GAA----TGCTA--T---T----------------------T-CTACAC---AA-----GCACA-T---TTG--------------------TAT-TTACAAT--G
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                   11541 53 +     13056 GGGT-----AATGTT--TG-CA-----GAA----TGTTA--T---T----------------------T-CTACAC---AT-----GCACA-A---TTG--------------------TAT-TTACAAT--G
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69319659 53 -  96451834 GAGC-----AATACT--TC-CA-----GAA----TACTA--T---T----------------------T-CTACTC---AA-----GCGTA-T---TTT--------------------CAT-TTACAAT--G
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                    2363 54 +    136657 GGAC-----AGCATT--TA-CA-----AAA----TGCTA--T---T----------------------T-CTCTTC--CAA-----GCATA-A---TTT--------------------CAT-TTACAAT--G
i Uropsilus_gracilis.UroGra_scaffold_4115               I 43 C 0
s Ursus_maritimus.KK498671.1                              6523154 52 +  28682327 GGGA-----AA-ATC--TG-TA-----GAA----TACTA--T---T----------------------T-CTACTC---AA-----ACGTG-T---TTC--------------------CAT-TTACAAC--A
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                 11070 53 -     20643 GGGT-----AATATT--TG-CA-----GAA----TACTA--C---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------CAT-TTACAAT--G
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             30605 53 -     33872 GGGT-----AATATT--TG-CA-----GAA----TACTA--C---T----------------------T-CTACTC---AA-----GCATA-T---TTT--------------------CAT-TTACAAT--G
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1530694 31 -   2331223 GGGC-----AATATT--CA-CA-----GAA----TACTG--T---T----------------------T-CTACTC---------------------------------------------------------
i Vicugna_pacos.KN269600.1                              I 18 I 20
s Vulpes_lagopus.VulLag_flattened_line_2045                146829 53 -    281493 GGGC-----AATTTC--TG-TA-----GAA----TACTA--T---T----------------------T-CTACTC---AA-----ACATG-T---TTT--------------------TAT-TTGCAAA--A
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       133173 52 -    134049 GGGT-----AATATT--T--CA-----GAA----TGCTG--T---T----------------------T-CTATTC---AA-----GCATG-T---TTT--------------------CAT-TTACAAT--G
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        222249 53 -    227762 GGGA-----AATATC--TG-TA-----GAA----TACTA--T---T----------------------T-CTACTC---AA-----ACATG-T---TTC--------------------CAT-TTACAAC--A
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_202118                     2797 28 -      3360 ----------------------------------------------------------------------CTGCTG---AA-----GTATA-T---TTT--------------------CAC-TTACAGT--A
i Zapus_hudsonius.ZapHud_scaffold_202118                I 25 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            4252 53 -     13665 GAGC-----AATACT--TG-CA-----GAA----AACTA--T---T----------------------T-CTACTC---AA-----TCATA-T---TTT--------------------CAT-TTACAGT--G
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Hylobates_pileatus_a.tarseq_592                             37267 2881 -     60944 I
e Symphalangus_syndactylus.tarseq_24                        20205  0 -  13920577 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               19222 6 +    209709 CAC--T-TC
s Acinonyx_jubatus.LLWD01000356.1                         2042076 6 +   3721120 AGC--T-TT
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    119734 6 -    189883 TAT--T-TC
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10665939 6 +  23371972 CAC--T-TT
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7102892 6 -  16596857 CAC--T-TT
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_141108                   3101 4 -      7259 C----C-CT
i Allactaga_bullata.AllBul_scaffold_141108              C 0 I 9
s Allenopithecus_nigroviridis.k141_2469532                   7119 6 -     60446 CAC--T-TC
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         7833 6 -     29318 CAC--T-TC
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         6771 6 +     38766 CAC--T-TC
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          7729 6 -     80423 CAC--T-TC
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              2671 6 +     19852 CAA--T-TC
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                4887 6 -     12443 CAA--T-TC
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                             2214 6 +      5070 CAA--T-TC
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_macconnelli.k141_2318944                          4696 6 -     24210 CAA--T-TC
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_494922                             1200 6 -      8325 CAA--T-TC
i Alouatta_nigerrima.k141_494922                        C 0 C 0
s Alouatta_palliata.k141_405616                              7095 6 +     16794 CAA--T-TC
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_347198                             1147 6 +      9111 CAA--T-TC
i Alouatta_puruensis.k141_347198                        C 0 C 0
s Alouatta_seniculus.k141_790278                             6395 6 -      9835 CAA--T-TC
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3529109 6 +   4113121 CAC--T-TT
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      395057 6 -    631301 TAC--T-TT
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             6522 6 +     55446 cac--t-tt
i Antilocapra_americana.AntAmePen_scaffold_27338        I 183 C 0
s Aotus_azarae.k141_3170768                                 68003 6 +     78111 CAA--T-TC
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                           10944 6 +     22701 CAA--T-TC
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5754913 6 +   9889416 CAA--T-TC
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                            11492 6 -    104377 CAA--T-TC
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                              11521 6 +     23246 CAA--T-TC
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     4142 7 +     11424 TTC--TGTT
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 I 4
s Arctocebus_calabarensis.k141_587554                        8100 6 +      9265 TAC--T-TC
i Arctocebus_calabarensis.k141_587554                   C 0 I 2
s Artibeus_jamaicensis.ArtJam_scaffold_41619                13363 6 -     29036 TAC--G-TT
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 I 2
s Ateles_geoffroyi_b.tarseq_2582                             9544805 6 +  39197703 CAA--T-TC
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             66079 6 +     85812 CAA--T-TC
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                17089 6 +     89302 CAA--T-TC
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             21593 6 -     58268 CAA--T-TC
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             69587 6 +    119057 CAA--T-TC
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              11556 6 -     25888 CAA--T-TC
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                12650 6 -     16375 CAC--T-TT
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               6266 6 +      6337 CAC--T-TT
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26386538 6 +  51448160 CAC--T-TT
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                       11712 6 -     13118 CAC--T-TT
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   51309 6 -     72089 CAC--T-TT
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   306034 6 -   6870073 CAC--T-TT
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22960140 6 + 161108492 CAC--T-TT
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     422319 6 +    998990 CAC--T-TT
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22668792 6 + 158972876 CAC--T-TT
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               677642 6 +   1914593 CAC--T-TT
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               119419 6 -    171031 CAA--T-TC
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 18439 6 +    125063 CAA--T-TC
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                20486 6 -    216513 CAA--T-TC
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       13029 6 -    134917 CAA--T-TC
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3225637 6 -   8989139 CAC--T-TT
i Camelus_bactrianus.KN276303.1                         I 20 I 2
s Camelus_dromedarius.KN271192.1                           403337 6 -  15254737 CAC--T-TT
i Camelus_dromedarius.KN271192.1                        I 20 I 2
s Camelus_ferus.KB016973.1                                2979075 6 +   6889770 CAC--T-TT
i Camelus_ferus.KB016973.1                              I 20 I 2
s CanFam4.chr31                                          11528796 6 +  39901454 CAC--T-TT
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   23770 6 +     87036 CAC--T-TT
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11275693 6 -  35597290 CAC--T-TT
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11098191 6 +  39895921 CAC--T-TT
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16464975 6 -  44759192 CAC--T-TT
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21336543 6 + 157394656 CAC--T-TT
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135714896 6 - 157403528 CAC--T-TT
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          314994 6 +    345090 cat--c-at
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               64346 6 +     67245 TAC--T-TT
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_1326                     1645 4 -    202837 CAC--T---
i Castor_canadensis.CasCan_scaffold_1326                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   165355 6 -    276539 CAt--t-tt
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 I 244
s Cavia_aperea.AVPZ01000278.1                            15791877 6 -  24422027 CAT--T-TG
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15803822 6 -  24440124 CAT--T-TG
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       181994 6 +    436027 CAT--T-TG
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18897155 6 -  29618158 CAA--T-TC
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                13805 6 -     26817 CAA--T-TC
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                18048 6 +     25043 CAA--T-TC
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                        14031 6 +     21754 cat--c-at
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4370622 6 +   7569818 CAC--A-TT
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_171732          779 6 +      8380 CAC--A-TT
i Ceratotherium_simum_cottoni.CerCot_scaffold_171732    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6561058 6 +   6739814 caC--T-TC
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      32535 6 +     60454 CAC--T-TC
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          7739 6 -     21101 CAC--T-TC
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         65049 6 -    107033 CAC--T-TC
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        7910 6 -     17608 CAC--T-TC
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          5078 6 +     45019 CAC--T-TC
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           5346 6 +     15177 CAC--T-TC
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          7960 6 +     16677 CAC--T-TC
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           30148 6 +     35983 CAC--T-TC
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11996681 6 +  12117833 CAC--T-TC
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46483663 6 +  46592721 CAC--T-TC
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                       1766 6 -     27215 CAC--T-TC
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       7974 6 +     35577 CAC--T-TC
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        7768 6 -     25661 CAC--T-TC
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        7932 6 -     17744 CAC--T-TC
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        27301 6 +     37128 CAC--T-TC
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           6288 6 -      6963 CAC--T-TT
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      I 16 C 0
s Cheirogaleus_major.k141_1157592                           64866 6 -     68416 CCC--T-TT
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_854352                            1167 6 +     27737 CCC--T-TT
i Cheirogaleus_medius.k141_854352                       C 0 C 0
s Cheracebus_lucifer.k141_619653                            11113 6 -     18223 CAA--T-TC
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              2854 6 +    188999 CAA--T-TC
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           47153 6 +     57117 CAA--T-TC
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          51833 6 +     54541 CAA--T-TC
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15966578 6 +  43084221 tat--t-tg
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         76634 6 +    196370 CAA--T-TC
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          20815 6 +     40510 CAA--T-TC
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15145494 6 -  15256731 CAC--T-TC
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      39958 6 -     53260 CAC--T-TC
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101150517 6 + 101219884 cac--t-tC
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                20345 6 -     21363 CAC--T-TT
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           765649 6 +    964067 CAC--T-TT
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_304221              3288 6 -      7053 CAT--T-TT
i Chrysochloris_asiatica.ChrAsi_scaffold_304221         C 0 C 0
s Colobus_angolensis.KN985967.1                          10890287 6 +  10971483 caC--T-TC
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147668215 6 + 156195979 CAC--T-TC
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            20198 6 +     23629 CAC--T-TC
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60624608 6 +  78930452 CAC--T-TT
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         5018 6 -      5782 TGC--T-Tt
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 284638 6 -    399297 TAG--T-TC
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53036924 6 +  72327488 TCA--T-TC
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              4480 6 -     22648 AAT--T-TT
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            60008 6 -     70449 CAC--T-TT
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  216773 6 -    956709 CAT--T-TG
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 38295 6 -     67205 TAT--T-TG
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                23111 6 +     26546 CAT--T-TG
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             64255 6 -    236241 CAT--T-TG
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          187346 6 -   6883506 CAT--T-TT
i Dasypus_novemcinctus.JH568778.1                       I 15 C 0
s Daubentonia_madagascariensis.ctg11                     16850812 6 +  31942871 CAC--T-TT
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80043124 6 -  96802777 CAC--T-TT
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18703568 6 -  18957592 taC--T-TT
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 329021 6 +    993696 CAC--G-TT
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   9655 6 +    151128 CAC--G-TT
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   162190 6 +    228994 CAT--T-TG
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3661917 6 +   4240102 TAT--T-TT
i Dipodomys_ordii.KN672545.1                            C 0 I 3
s Dipodomys_stephensi.DipSte_scaffold_84338                  4271 6 -     11986 TAT--T-TT
i Dipodomys_stephensi.DipSte_scaffold_84338             I 4 I 3
s Dolichotis_patagonum.DolPat_scaffold_14102                42822 6 -     73477 CAC--T-TG
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           23007268 6 -  44670279 CAT--T-TT
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 15744 6 +     24177 cAC--T-TT
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1499104 6 +   1727528 CAC--T-TT
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        245626 6 -    369425 CAG--T-TC
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01076532.1                           1977 6 +      9159 CAG--T-TC
i Ellobius_talpinus.LOJH01076532.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85879957 6 +  99434291 CAC--T-TT
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4711342 6 +   6522550 cac--t-TT
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5858881 6 -   7175178 CAC--T-TT
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13357367 6 +  41866177 cat--t-tt
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          18857 6 +     92910 cat--t-tt
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11544363 2 +  16010500 CA-------
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48782527 6 -  48907691 CAC--T-TC
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          321383 6 +    330699 CAC--T-TT
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             67835 6 +     89355 CAC--T-TT
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                             10932 6 +     13586 CAT--T-TT
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_419870                                 40 6 +      2668 CAC--T-TT
i Eulemur_collaris.k141_419870                          N 0 C 0
s Eulemur_coronatus.k141_3240342                            17328 6 +     36558 CAC--T-TT
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            13650 6 +     60246 CAT--T-TT
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                17135 6 +    109717 CAC--T-TT
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 5118 6 -     19505 CAT--T-TT
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                21793 6 +     27497 CAT--T-TT
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           24249 6 +     26808 CAC--T-TT
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                38981 6 +     46535 CAT--T-TT
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              21722 6 -     29447 CAT--T-TT
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129901651 6 - 159252932 AGC--T-TT
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129288628 6 - 158578461 AGC--T-TT
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 29818 6 +     52776 AGC--T-TT
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13899671 6 -  19261668 CAT--T-TA
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     216974 6 -    847004 CAC--T-TC
i Galago_moholi.ctg555                                  C 0 I 2
s Galago_senegalensis.k141_964197                           19336 6 -     43889 CAC--T-TC
i Galago_senegalensis.k141_964197                       C 0 I 2
s Galagoides_demidoff.k141_1769638                          16477 6 +     27357 CAC--T-TC
i Galagoides_demidoff.k141_1769638                      C 0 I 2
s Galeopterus_variegatus.GalVar_scaffold_354               161245 6 +    324696 CAC--T-TT
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    188832 6 -    189561 CAC--T-TT
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           18174 6 -     18683 TGA--T-AT
i Glis_glis.GliGli_scaffold_79770                       C 0 I 4
s Gorilla_beringei.k141_111300                              10928 6 -     14630 CAT--T-TC
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119658028 6 - 195582420 cat--t-tc
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   81475 6 +    118900 TGA--C-TT
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 I 4
s Hapalemur_alaotrensis.k141_1280836                         7724 6 +     10286 CAC--T-TT
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             6205 6 -     11661 CAC--T-TT
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                            11529 6 +     56096 CAC--T-TT
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        34778 6 -     42470 CAC--T-TT
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        51404 6 -     54384 CAC--T-TT
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              25126 6 +     53719 CAC--T-TT
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                35923 6 -     91191 CAC--T-TT
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2563838 6 +  31725842 TGT--T-TC
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               65419 5 +     73687 CAT--T--T
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              153204 6 +    277961 CAC--T-TT
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      286680 6 -    477199 CAC--C-TT
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959               3953 6 +     26078 cac--c-tt
i Hipposideros_galeritus.HipGal_scaffold_52959          C 0 C 0
s Hoolock_leuconedys.ctg315                                   351935 6 +    431944 TAC--T-TC
i Hoolock_leuconedys.ctg315                                I 394 I 16
s Hyaena_hyaena.HyaHya_flattened_line_20729                 25562 6 -     67322 CAC--T-TT
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           23478 6 -    119109 CAT--T-TG
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_1048809                               16 6 -      6555 TAC--T-TC
i Hylobates_abbotti.k141_1048809                        N 0 C 0
s Hylobates_agilis.k141_1136966                              1423 6 +      9785 TAC--T-TC
i Hylobates_agilis.k141_1136966                         C 0 C 0
s Hylobates_klossii.k141_468230                              4903 6 +      5464 TAC--T-TC
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14630249 6 -  25970782 TAC--T-TC
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            2800 6 +      4161 TAC--T-TC
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                    11768 6 +     22540 CAT--T-TG
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7132029 6 +  13083262 TAC--T-TT
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 I 4
s Indri_indri.k141_2197838                                   3262 6 +      3484 CAC--T-TT
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              15351 6 +     17520 CAC--T-TT
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8580854 4 +  11848649 C----C-CT
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               29980 6 +     37189 CAC--T-TT
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          55677 6 -    147782 CAA--T-TC
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    9043 6 +     26176 CAC--T-TT
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258413082 6 - 285822530 CAC--T-TT
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        30403 6 +     39228 CAC--T-TT
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            59767 6 +     63517 CAC--T-TT
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        38148 6 -     38897 CAC--T-TT
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      4193 6 -     13103 CAC--T-TT
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3094398 6 -   3498232 CAC--T-TT
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_470947                     418 6 -      1692 TAC--C-TT
i Lepus_americanus.LepAme_scaffold_470947               C 0 C 0
s Lipotes_vexillifer.KE558548.1                            142273 6 +   3060487 CAC--T-TT
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19254147 6 +  19376315 CAC--T-TC
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           16917 6 +     84689 CAA--T-TC
i Loris_lydekkerianus.k141_550999                       C 0 I 2
s Loris_tardigradus.ctg97                                 3784650 6 +   6799190 CAA--T-TC
i Loris_tardigradus.ctg97                               C 0 I 2
s Loxodonta_africana.GL010040.1                          20600984 5 -  62548349 CAT--T--T
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11097647 6 +  39895028 caC--T-TT
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             25896 6 +     74745 CAC--T-TC
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12712359 6 +  12821369 CAC--T-TC
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                4932 6 -     26467 CAC--T-TC
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           52803 6 +     63263 CAC--T-TC
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 4913 6 -     26361 CAC--T-TC
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_2667654                                1216 6 -      5626 CAC--T-TC
i Macaca_leonina.k141_2667654                           C 0 C 0
s Macaca_maura.k141_251854                                  51332 6 -     79256 CAC--T-TC
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196041430 6 + 196197964 CAC--T-TC
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11451600 6 +  11645122 CAC--T-TC
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                  10286 6 -     46448 CAC--T-TC
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                7948 6 -     13212 CAC--T-TC
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 21629 6 -     55006 CAC--T-TC
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43847051 6 +  43892939 CAC--T-TC
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               22914 6 -     24607 CAC--T-TC
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                              10283 6 -     27140 CAC--T-TC
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                704343 6 +    802869 CAC--T-TT
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43443316 6 -  43563597 CAC--T-TC
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4456115 6 -   4543643 CAC--T-TC
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            154636 6 +    252755 TAC--T-TT
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             42235 6 +     58827 TAC--T-TT
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36879895 6 +  64221397 TAC--T-TT
i Marmota_marmota.CZRN01000005.1                        C 0 I 4
s Megaderma_lyra.MegLyr_scaffold_3562                       68162 6 -    234502 CAA--T-TT
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             9052 6 -     87323 CAC--T-TT
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 3860 6 +    115071 TGG--C-TT
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1053497 6 -  26018355 TCA--T-TT
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    4942 6 -     12939 CAC--T-TT
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16516122 6 +  47401472 CAT--T-TT
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  47151 6 -     48017 CAT--T-TT
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               27293 6 -     32043 TAC--T-TT
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22826460 6 -  98408828 CAG--T-TC
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8215670 6 +  10048721 CAC--T-TT
i Miniopterus_natalensis.LDJU01000022.1                 C 0 C 0
s Miniopterus_schreibersii.MinSch_scaffold_24116            40129 6 +     45743 CAC--T-TT
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         7866 6 +     29742 CAC--T-TC
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        19800 6 -    104932 CAC--T-TT
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     6816 6 -     12809 CAT--T-TT
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 152717 6 +    154973 CAC--T-TT
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                165814 6 +    265003 TGC--T-TT
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  9500 6 -     19904 CAC--T-TT
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  152852 6 -    168139 CAC--T-TT
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          26654 6 -    100666 CAT--T-TT
i Murina_feae.MurFea_scaffold_2254                      C 0 C 0
s Mus_caroli.LT608236.1                                  70773742 6 +  92629107 TAC--T-TC
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75495803 6 +  98207768 TAC--T-TC
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67562536 6 +  89017189 TAC--T-TC
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74338507 6 +  97876770 TAC--T-TC
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             17150 6 +     98495 TGA--T-TT
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4431145 6 -  28371801 CAC--T-TT
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     98224 6 -    117718 CCT--T-TG
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               973675 6 +   8389877 cAC--T-TT
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5024751 6 +   6462685 cAC--T-TT
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3471172 6 -   3747815 cAC--T-TT
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        16409 6 +     66751 CAC--T-TT
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_12795               771 6 -     87886 CAC--T-TT
i Myrmecophaga_tridactyla.MyrTri_scaffold_12795         C 0 C 0
s Nannospalax_galili.KL201303.1                            126210 6 +    362372 TGC--T-TT
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                              12127 6 +     48152 CAC--T-TC
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4493191 6 -  14209539 CAC--T-TT
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3957308 6 -   4490290 CAC--T-TT
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  53127 6 +     94413 tgc--t-tc
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 C 0
s Nomascus_annamensis.k141_881190                             234 6 -      2113 TAC--T-TC
i Nomascus_annamensis.k141_881190                       C 0 C 0
s Nomascus_concolor.k141_256540                              8531 6 -      8966 TAC--T-TC
i Nomascus_concolor.k141_256540                         C 0 C 0
s Nomascus_gabriellae.k141_202556                             293 6 -      1580 TAC--T-TC
i Nomascus_gabriellae.k141_202556                       C 0 C 0
s Nomascus_siki_b.tarseq_453                             7784 6 +     12787 TAC--T-TC
i Nomascus_siki_b.tarseq_453                        C 0 C 0
s Nomascus_siki_a.k141_421408                                  2386 6 +     16235 TAC--T-TC
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                40524 6 +   3668941 CAC--T-TT
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65573706 6 -  95554990 CAA--T-TC
i Nycticebus_bengalensis.LG16                           C 0 I 2
s Nycticebus_coucang.k141_6040852                            1342 6 +      1868 CAA--T-TC
i Nycticebus_coucang.k141_6040852                       C 0 I 2
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65681888 6 +  89412551 CAA--T-TC
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 I 2
s Octodon_degus.JH651621.1                                3693368 6 +  10294119 cAT--T-TG
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             687441 6 -   3126709 CAT--T-TT
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1086490 6 +   1425656 CAC--T-TT
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         44562 6 +     78940 CAC--T-TT
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  132267 6 +    145789 CAG--T-TC
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  45209 6 +     62360 TAG--T-CC
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7230982 6 -   7562323 CAC--T-TT
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_371885              2201 6 +      3658 CAT--T-TT
i Orycteropus_afer.OryAfe_flattened_line_371885         C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141885689 6 + 163896628 TAC--C-TT
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      317656 6 -    505867 CAC--T-TT
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        6835 6 -     53940 CAC--T-TC
i Otolemur_crassicaudatus.k141_505435                   C 0 I 2
s Otolemur_garnettii.GL873528.1                          18014800 6 -  38779656 cac--t-tc
i Otolemur_garnettii.GL873528.1                         C 0 I 2
s Ovis_aries.CM001582.2                                 134085705 6 - 275406953 CAC--T-TT
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      86957 6 +    140051 CAC--T-TT
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.AJFE02000020.1                                1241 6 -      1352 caC--T-TC
i Pan_paniscus.AJFE02000020.1                           I 573 n 6
s Pan_troglodytes.NBAG03000771.1                           187158 6 +    210065 CAC--T-TC
i Pan_troglodytes.NBAG03000771.1                        I 762 I 81
s Panthera_onca.PanOnc_flattened_line_1615                  42418 6 +    295523 AGC--T-TT
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3646232 6 +  18214204 AGC--T-TT
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5035869 6 -   6340057 AGC--T-TT
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1074596 6 -   1292953 CAC--T-TG
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188162108 6 - 188283584 caC--T-TC
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              5198 6 +     25005 CAC--T-TC
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47519480 6 +  47705337 CAC--T-TC
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 73473 6 -    104429 CAC--T-TC
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   12003 6 +     14967 CAC--T-TC
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_899489                                   673 6 -     13896 CAC--T-TC
i Papio_ursinus.k141_899489                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    123884 6 -    135482 CAG--T-TT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          12490 6 -     23713 TAC--T-TC
i Perodicticus_ibeanus.k141_117958                      C 0 I 2
s Perodicticus_potto.k141_1136815                           13641 6 +     61070 TAC--T-TC
i Perodicticus_potto.k141_1136815                       C 0 I 2
s Perognathus_longimembris.PerPac_flattened_line_19359       3917 5 +     49596 TAT--T--T
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 I 3
s Peromyscus_maniculatus.KI615458.1                       2841023 6 -   3366660 TAG--T-TC
i Peromyscus_maniculatus.KI615458.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    19776 6 -     36578 CAT--T-TG
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              5442 6 +      8220 CAC--T-TT
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Piliocolobus_badius.k141_1987485                           5661 6 -      5908 CAC--T-TC
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       6280 6 -     17985 CAC--T-TC
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            5647 6 +      7694 CAC--T-TC
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26744130 6 +  26888534 caC--T-TC
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306           101905 6 +    112873 CAC--T-TT
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             45827 6 -     61926 CAA--T-TC
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        27203 6 +     78826 CAA--T-TC
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                             11258 6 -     15800 CAA--T-TC
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        14457 6 -     16101 CAA--T-TC
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          7686 6 +      9673 CAA--T-TC
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13476679 6 -  19735023 CAA--T-TC
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           15589 6 -     31692 CAA--T-TC
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990          11950 6 +     21690 CAC--T-TT
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       27765 6 +     44506 CAA--T-TC
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        27978 6 +     67491 CAA--T-TC
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      18217 6 -     98129 CAA--T-TC
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     27818 6 +    147771 CAA--T-TC
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         4453 6 -     43940 CAA--T-TC
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          8536 6 -     55515 CAA--T-TC
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         27890 6 +    152463 CAA--T-TC
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       5694 6 -    119457 CAA--T-TC
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         17612 6 +    134592 CAA--T-TC
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          28200 6 -     75465 CAA--T-TC
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              192836 6 -    373494 CAC--T-TC
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19813489 6 +  19899266 CAC--T-TC
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               9409 6 -     15069 CAC--T-TC
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              9524 6 +     14865 CAC--T-TC
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                6526 5 -      9567 CAT--T--T
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6854458 6 +  12164890 cac--t-tt
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    674032 6 -   2312742 CAC--T-TT
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         9556 6 +     11805 CAC--T-TT
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           48886 6 +     52369 CAC--T-TT
i Propithecus_diadema.k141_577245                       I 6 C 0
s Propithecus_edwardsi.k141_1317105                         41273 6 -     44753 CAC--T-TT
i Propithecus_edwardsi.k141_1317105                     I 6 C 0
s Propithecus_perrieri.k141_7554                            23196 6 +     27322 CAC--T-TT
i Propithecus_perrieri.k141_7554                        I 6 C 0
s Propithecus_tattersalli.k141_907138                       22848 6 -     53241 CAC--T-TT
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         45111 6 -     48185 CAC--T-TT
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           40836 6 +     77221 TGG--C-TT
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            8478 6 -     27784 CGC--T-TT
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        252797 6 -    344369 CAC--T-TT
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13249455 6 -  17261082 cac--t-tt
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.KN525959.1                             607406 6 -   3946241 cac--t-tt
i Pteropus_vampyrus.KN525959.1                          C 0 C 0
s Puma_concolor.QAVW01000427.1                          131542559 6 - 161321710 AGC--T-TT
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             33515 6 +     56732 CAC--T-TC
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6810012 6 +   6970761 CAC--T-TC
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             9401 6 +     18040 CAC--T-TC
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                23338 6 +     68503 CAC--T-TT
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13921229 6 +  90463843 TAC--T-TC
i Rattus_norvegicus.chr11                               C 0 I 2
s Rhinolophus_sinicus.LVEH01000179.1                      1795282 6 +   2252614 aac--T-TC
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                            3780 6 -     17045 CAC--T-TC
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206381267 6 - 206558726 caC--T-TC
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44860170 6 -  45163003 CAC--T-TC
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                22814 6 +    109198 cac--t-tt
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                      4224 6 -      4338 CAC--T-TT
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15678210 6 -  43202129 CAA--T-TC
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                       10124 6 +     34089 CAA--T-TC
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                             10063 6 -     60842 CAA--T-TC
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                             10157 6 +     67014 CAA--T-TC
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                             10134 6 +     60816 CAA--T-TC
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                10071 6 -     76454 CAA--T-TC
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17346843 6 -  30362882 CAA--T-TC
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         26164 6 -     62485 CAA--T-TC
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   42075 6 -    114521 CAC--T-TT
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        7016 6 +     15331 CAC--T-TC
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      12391 6 +     20762 CAC--T-TC
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         122395 6 +    130994 CAC--T-TC
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           41175 6 +     46263 CAC--T-TC
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     34320 6 +     42640 CAC--T-TC
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        17342 6 +     30600 CAC--T-TC
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  107421 6 -    120886 AAG--T-TT
i Sigmodon_hispidus.SigHis_scaffold_11332               I 37 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            26725 6 +    739146 CAC--T-GT
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17777055 6 -  27805282 aac--T-TC
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2245730 6 +   2842873 TAC--T-TT
i Spermophilus_dauricus.KZ294190.1                      C 0 I 4
s Spilogale_gracilis.SpiGra_flattened_line_905             241560 8 -    276980 CACATG-TT
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            35756 6 +     62062 CAC--T-TT
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189277744 6 + 218635234 cat--t-tt
i Sus_scrofa.CM000824.4                                 C 0 I 235
s Tadarida_brasiliensis.TadBra_scaffold_61492                4750 6 +     20549 CAC--T-TT
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               19005 6 +     45698 CAC--T-TT
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      813354 6 +   1148477 CAC--T-TC
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  63990 6 +     99546 CAC--T-TC
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               32854 6 +     42269 cat--c-gt
i Tarsius_lariang.k141_609102                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194013641 6 - 194193292 caC--T-TC
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             40873 6 -     47444 TAT--T-TG
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                  2135 6 -      3104 CAC--T-TT
i Tolypeutes_matacus.TolMat_scaffold_475685             I 13 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  140481 6 -    259118 TAC--T-TT
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        30663 6 +     38948 CAC--T-TC
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   24223 6 -     32910 CAC--T-TC
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      6124 6 -     12939 CAC--T-TC
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       5552 6 -     14244 CAC--T-TC
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           46945 6 -     54611 CAC--T-TC
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        4746 6 -     11566 CAC--T-TC
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     6930 6 -     15592 CAC--T-TC
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          5582 6 +     14371 CAC--T-TC
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   3868 6 +     12481 CAC--T-TC
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        3849 6 -     24393 CAC--T-TC
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       8993 6 -     28054 CAC--T-TC
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44663777 6 -  44834318 CAC--T-TC
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       6089 6 +     13828 CAC--T-TC
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                  11823 6 +     90398 CAC--T-TG
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16092063 5 +  31416278 CAT--T--T
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2802770 6 -   3938065 CAT--T-TT
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                   11594 6 +     13056 CAT--T-TT
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69319712 6 -  96451834 CAC--T-TT
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                    2417 6 +    136657 CAC--T-TT
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 C 0
s Ursus_maritimus.KK498671.1                              6523206 6 +  28682327 CAC--T-TT
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                 11123 6 -     20643 CAC--T-TT
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             30658 6 -     33872 CAC--T-TT
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1530745 6 -   2331223 CAC--T-TT
i Vicugna_pacos.KN269600.1                              I 20 I 2
s Vulpes_lagopus.VulLag_flattened_line_2045                146882 6 -    281493 CAC--T-TT
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       133225 6 -    134049 TAC--T-TT
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        222302 6 -    227762 CAC--T-TT
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_202118                     2825 4 -      3360 C----C-TT
i Zapus_hudsonius.ZapHud_scaffold_202118                C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            4305 6 -     13665 CAC--T-TT
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Ochotona_princeps.JH802095.1                            5001729 0 -  23139505 C
e Elephantulus_edwardii.JH947210.1                        7837010 301 +  15467074 I
e Hylobates_pileatus_a.tarseq_592                             37267 2881 -     60944 I
e Symphalangus_syndactylus.tarseq_24                        20205 0 -  13920577 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               19228  9 +    209709 A------CA-A--A-TG--------------TT
s Acinonyx_jubatus.LLWD01000356.1                         2042082  9 +   3721120 A------TC-A--A-TG--------------TT
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    119740  9 -    189883 A------GG-A--G-TT--------------CT
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10665945  9 +  23371972 A------TC-A--G-TG--------------TT
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7102898  9 -  16596857 A------TC-T--G-TG--------------TT
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_67806                    6938 17 +     22864 ----------------GAACCCTATCAGTGTTT
i Allactaga_bullata.AllBul_scaffold_67806               I 73 I 7
s Allenopithecus_nigroviridis.k141_2469532                   7125  9 -     60446 A------CA-A--A-TG--------------TT
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         7839  9 -     29318 A------CA-A--A-TG--------------TT
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         6777  9 +     38766 A------CA-A--A-TG--------------TT
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          7735  9 -     80423 A------CA-A--A-TG--------------TT
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              2677  9 +     19852 A------CA-A--G-TG--------------TT
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                4893  9 -     12443 A------CA-A--A-TG--------------TG
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                             2220  9 +      5070 A------CA-A--G-TG--------------TT
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_macconnelli.k141_2318944                          4702  9 -     24210 A------CA-A--A-TG--------------TG
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_494922                             1206  9 -      8325 A------CA-A--A-TG--------------TT
i Alouatta_nigerrima.k141_494922                        C 0 C 0
s Alouatta_palliata.k141_405616                              7101  9 +     16794 A------CA-A--A-TG--------------TT
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_347198                             1153  9 +      9111 A------CA-A--A-TG--------------TT
i Alouatta_puruensis.k141_347198                        C 0 C 0
s Alouatta_seniculus.k141_790278                             6401  9 -      9835 A------CA-A--A-TG--------------TG
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3529115  8 +   4113121 -------TA-A--A-TG--------------TT
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      395063  9 -    631301 G------TA-A--A-TG--------------tg
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 I 466
s Antilocapra_americana.AntAmePen_scaffold_27338             6528  8 +     55446 -------ta-a--a-tg--------------tt
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 68009  9 +     78111 A------CA-A--A-TG--------------TT
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                           10950  9 +     22701 A------CA-A--A-TG--------------TT
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5754919  9 +   9889416 A------CA-A--A-TG--------------TT
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                            11498  9 -    104377 A------CA-A--A-TG--------------TT
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                              11527  9 +     23246 A------CA-A--A-TG--------------TT
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     4153  3 +     11424 ----------------G--------------TT
i Aplodontia_rufa.AprRuf_scaffold_101456                I 4 C 0
s Arctocebus_calabarensis.k141_587554                        8108  9 +      9265 A------TA-A--A-TG--------------TT
i Arctocebus_calabarensis.k141_587554                   I 2 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                13371  9 -     29036 G------TA-A--A-TG--------------tg
i Artibeus_jamaicensis.ArtJam_scaffold_41619            I 2 I 470
s Ateles_geoffroyi_b.tarseq_2582                             9544811  9 +  39197703 A------CA-A--A-TG--------------TT
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             66085  9 +     85812 A------CA-A--A-TG--------------TT
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                17095  9 +     89302 A------CA-A--A-TG--------------TT
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             21599  9 -     58268 A------CA-A--A-TG--------------TT
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             69593  9 +    119057 A------CA-A--A-TG--------------TT
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              11562  9 -     25888 A------CA-A--A-TG--------------TT
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                12656  9 -     16375 A------TA-A--A-TG--------------TT
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               6272  9 +      6337 A------TA-A--A-TG--------------TT
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26386544  8 +  51448160 -------TA-A--A-TG--------------TT
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                       11718  8 -     13118 -------TA-A--A-TG--------------TT
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   51315  8 -     72089 -------TA-A--A-TG--------------TT
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   306040  8 -   6870073 -------TA-A--A-TG--------------TT
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22960146  8 + 161108492 -------TA-A--A-TG--------------TT
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     422325  8 +    998990 -------TA-A--A-TG--------------TT
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22668798  8 + 158972876 -------TA-A--A-TG--------------TT
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               677648  8 +   1914593 -------TA-A--A-TG--------------TT
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               119425  9 -    171031 A------CA-A--A-TG--------------TT
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 18445  9 +    125063 A------CA-A--A-TG--------------TT
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                20492  9 -    216513 A------CA-A--A-TG--------------TT
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       13035  9 -    134917 A------CA-A--A-TG--------------TT
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3225645  3 -   8989139 ----------------G--------------TT
i Camelus_bactrianus.KN276303.1                         I 2 C 0
s Camelus_dromedarius.KN271192.1                           403345  3 -  15254737 ----------------G--------------TT
i Camelus_dromedarius.KN271192.1                        I 2 C 0
s Camelus_ferus.KB016973.1                                2979083  3 +   6889770 ----------------G--------------TT
i Camelus_ferus.KB016973.1                              I 2 C 0
s CanFam4.chr31                                          11528802  9 +  39901454 A------TC-A--G-TG--------------TT
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   23776  9 +     87036 A------TC-A--G-TG--------------TT
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11275699  9 -  35597290 A------TC-A--G-TG--------------TT
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11098197  9 +  39895921 A------TC-A--G-TG--------------TT
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16464981  9 -  44759192 A------TC-A--G-TG--------------TT
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21336549  8 + 157394656 -------TA-A--A-TG--------------TT
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135714902  8 - 157403528 -------TA-A--A-TG--------------TT
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          315000  9 +    345090 A------TA-A--A-CA--------------GA
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               64352  9 +     67245 G------TA-A--A-TG--------------tg
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 I 468
s Castor_canadensis.CasCan_scaffold_1326                     1649 10 -    202837 T------TAAA--G-TA--------------TT
i Castor_canadensis.CasCan_scaffold_1326                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   165605  9 -    276539 A------CG-A--A-TG--------------TT
i Catagonus_wagneri.CatWag_scaffold_1305                I 244 C 0
s Cavia_aperea.AVPZ01000278.1                            15791883  9 -  24422027 A------TA-G--A-TG--------------TT
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15803828  9 -  24440124 A------TA-G--A-TG--------------TT
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       182000  9 +    436027 A------TA-G--A-TG--------------TT
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18897161  9 -  29618158 A------CA-A--A-TG--------------TT
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                13811  9 -     26817 A------CA-A--A-TG--------------TT
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                18054  9 +     25043 A------CA-A--A-TG--------------TT
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                        14037  9 +     21754 a------ta-a--a-ca--------------ga
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4370628  9 +   7569818 A------TA-A--A-TG--------------TT
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_171732          785  9 +      8380 A------TA-A--A-TG--------------TT
i Ceratotherium_simum_cottoni.CerCot_scaffold_171732    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6561064  9 +   6739814 A------CA-A--A-TG--------------TT
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      32541  9 +     60454 A------CA-A--A-TG--------------TT
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          7745  9 -     21101 A------CA-A--A-TG--------------TT
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         65055  9 -    107033 A------CA-A--A-TG--------------TT
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        7916  9 -     17608 A------CA-A--A-TG--------------TT
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          5084  9 +     45019 A------CA-A--A-TG--------------TT
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           5352  9 +     15177 A------CA-A--A-TG--------------TT
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          7966  9 +     16677 A------CA-A--A-TG--------------TT
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           30154  9 +     35983 A------CA-A--A-TG--------------TT
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11996687  9 +  12117833 A------CA-A--A-TG--------------TT
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46483669  9 +  46592721 A------CA-A--A-TG--------------TT
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                       1772  9 -     27215 A------CA-A--A-TG--------------TT
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       7980  9 +     35577 A------CA-A--A-TG--------------TT
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        7774  9 -     25661 A------CA-A--A-TG--------------TT
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        7938  9 -     17744 A------CA-A--A-TG--------------TT
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        27307  9 +     37128 A------CA-A--A-TG--------------TT
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           6294  9 -      6963 A------TA-A--T-TG--------------TT
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           64872  9 -     68416 A------TA-A--C-TG--------------TT
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_854352                            1173  9 +     27737 A------TA-A--C-TG--------------TT
i Cheirogaleus_medius.k141_854352                       C 0 C 0
s Cheracebus_lucifer.k141_619653                            11119  9 -     18223 A------CA-T--A-TG--------------TT
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              2860  9 +    188999 A------CA-T--A-TG--------------TT
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           47159  9 +     57117 A------CA-T--A-TG--------------TT
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          51839  9 +     54541 A------CA-T--A-TG--------------TT
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15966584  9 +  43084221 a------ta-a--a-tt--------------tt
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         76640  9 +    196370 A------CA-A--A-TG--------------TT
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          20821  9 +     40510 A------CA-A--A-TG--------------TT
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15145500  9 -  15256731 A------CA-A--A-TG--------------TT
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      39964  9 -     53260 A------CA-A--A-TG--------------TT
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101150523  9 + 101219884 A------CA-A--A-TG--------------TT
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                20351  9 -     21363 A------TA-A--A-TG--------------CT
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           765655  9 +    964067 A------TA-A--A-TG--------------CT
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_304221              3294 15 -      7053 ATACTCATA-A--A-TC--------------AT
i Chrysochloris_asiatica.ChrAsi_scaffold_304221         C 0 C 0
s Colobus_angolensis.KN985967.1                          10890293  9 +  10971483 A------CA-A--A-TA--------------TC
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147668221  9 + 156195979 A------CA-A--A-TA--------------TC
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            20204  9 +     23629 A------CA-A--A-TA--------------CT
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60624614  9 +  78930452 A------TC-A--A-GG--------------TG
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         5024  9 -      5782 a------ta-a--a-tg--------------tg
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 I 473
s Cricetomys_gambianus.CriGam_scaffold_949                 284644  9 -    399297 A------TA-T--G-TG--------------CT
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53036930  9 +  72327488 A------TA-T--G-TG--------------CT
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              4486  9 -     22648 A------CG-G--T-GT--------------AA
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            60014  9 -     70449 A------TC-A--G-TA--------------TT
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  216779  9 -    956709 G------TA-A--T-TG--------------TT
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 38301  9 -     67205 A------TA-A--A-TG--------------TT
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                23117  9 +     26546 A------TA-A--A-TA--------------TT
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             64261  9 -    236241 A------TA-A--A-CA--------------TT
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          187352  9 -   6883506 A------TA-A--G-TG--------------TT
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16850818  9 +  31942871 A------TA-A--A-TG--------------TT
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80043130  8 -  96802777 -------TA-A--A-TG--------------TT
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18703574  9 -  18957592 G------GA-A--A-TG--------------TG
i Desmodus_rotundus.KZ672188.1                          C 0 I 467
s Dicerorhinus_sumatrensis.PEKH010003161.1                 329027  9 +    993696 A------TA-A--A-TG--------------TT
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   9661  9 +    151128 A------TA-A--A-TG--------------TT
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   162196  9 +    228994 A------TA-A--A-TT--------------TT
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3661926 10 +   4240102 T------TAGA--G-TA--------------TT
i Dipodomys_ordii.KN672545.1                            I 3 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  4280 10 -     11986 T------TAGA--G-TA--------------TT
i Dipodomys_stephensi.DipSte_scaffold_84338             I 3 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                42828  9 -     73477 A------TA-G--A-TG--------------TT
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           23007274 15 -  44670279 ATATTCATC-A--A-TA--------------AT
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 15750  8 +     24177 A-------A-A--A-TG--------------tg
i Eidolon_helvum.KE772537.1                             C 0 I 490
s Elaphurus_davidianus.JRFZ01086400.1                     1499110  8 +   1727528 -------GA-A--A-TG--------------TT
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        245632  9 -    369425 A------TA-A--G-TA--------------CT
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01076532.1                           1983  9 +      9159 A------TA-A--G-TA--------------CT
i Ellobius_talpinus.LOJH01076532.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85879963 10 +  99434291 A------TCCT--A-TG--------------TT
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4711348  9 +   6522550 A------TA-A--A-TG--------------tg
i Eptesicus_fuscus.JH977687.1                           C 0 I 479
s Equus_asinus.JREZ01000062.1                             5858887  9 -   7175178 A------TA-A--A-TG--------------TT
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13357373  9 +  41866177 a------ta-a--a-tg--------------tt
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          18863  9 +     92910 a------ta-a--a-tg--------------tt
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erythrocebus_patas.Contig8                             48782533  9 -  48907691 A------CA-A--A-TG--------------TT
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          321389  8 +    330699 -------TA-A--A-TG--------------TT
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             67841  8 +     89355 -------TA-A--A-TG--------------TT
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                             10938  9 +     13586 A------TA-A--A-TG--------------TT
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_419870                                 46  9 +      2668 A------TA-A--A-TG--------------TT
i Eulemur_collaris.k141_419870                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            17334  9 +     36558 A------TA-A--A-TG--------------TT
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            13656  9 +     60246 A------TA-A--A-TG--------------TT
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                17141  9 +    109717 A------TA-A--A-TG--------------TT
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 5124  9 -     19505 A------TA-A--A-TG--------------TT
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                21799  9 +     27497 A------TA-A--A-TG--------------TT
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           24255  9 +     26808 A------TA-A--A-TG--------------TT
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                38987  9 +     46535 A------TA-A--A-TG--------------TT
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              21728  9 -     29447 A------TA-A--A-TG--------------TT
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129901657  9 - 159252932 A------TC-A--A-TG--------------TT
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129288634  9 - 158578461 A------TC-A--A-TG--------------TT
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 29824  9 +     52776 A------TC-A--A-TG--------------TT
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13899677  9 -  19261668 A------TA-A--G-TA--------------TT
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     216982  9 -    847004 A------TA-A--A-TT--------------TT
i Galago_moholi.ctg555                                  I 2 C 0
s Galago_senegalensis.k141_964197                           19344  9 -     43889 A------TA-A--A-TT--------------TT
i Galago_senegalensis.k141_964197                       I 2 C 0
s Galagoides_demidoff.k141_1769638                          16485  9 +     27357 A------TA-A--A-TT--------------TT
i Galagoides_demidoff.k141_1769638                      I 2 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               161251  9 +    324696 A------TA-A--T-TA--------------TT
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    188838  8 -    189561 -------TG-A--A-TG--------------TT
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           18184  3 -     18683 ----------------G--------------TT
i Glis_glis.GliGli_scaffold_79770                       I 4 C 0
s Gorilla_beringei.k141_111300                              10934  9 -     14630 A------CA-A--A-TG--------------TT
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119658034  9 - 195582420 A------CA-A--A-TG--------------TT
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   81485  3 +    118900 ----------------G--------------TT
i Graphiurus_murinus.GraMur_scaffold_4493               I 4 C 0
s Hapalemur_alaotrensis.k141_1280836                         7730  9 +     10286 A------TA-A--A-TG--------------TT
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             6211  9 -     11661 A------TA-A--A-TG--------------TT
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                            11535  9 +     56096 A------TA-A--A-TG--------------TT
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        34784  9 -     42470 A------TA-A--A-TG--------------TT
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        51410  9 -     54384 A------TA-A--A-TG--------------TT
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              25132  9 +     53719 A------TC-A--A-TA--------------TG
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                35929  8 -     91191 -------TA-A--A-TG--------------TT
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2563844  9 +  31725842 A------CA-A--G-TA--------------TT
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               65424  9 +     73687 A------TA-A--A-TG--------------CT
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              153210  8 +    277961 -------TA-A--A-TG--------------TT
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      286686  9 -    477199 A------TA-A--a-tg--------------tg
i Hipposideros_armiger.JXIK01001085.1                   C 0 I 484
s Hipposideros_galeritus.HipGal_scaffold_52959               3959  9 +     26078 a------ta-a--a-tg--------------tg
i Hipposideros_galeritus.HipGal_scaffold_52959          C 0 I 485
s Hoolock_leuconedys.ctg79                                     10853  9 -   7690867 A------CA-A--G-TG--------------TT
i Hoolock_leuconedys.ctg79                                 I 6 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 25568  9 -     67322 A------TC-A--A-TG--------------TT
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           23484  9 -    119109 A------TA-G--A-TG--------------TT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_1048809                               22  9 -      6555 A------CA-A--G-TG--------------TT
i Hylobates_abbotti.k141_1048809                        C 0 C 0
s Hylobates_agilis.k141_1136966                              1429  9 +      9785 A------CA-A--G-TG--------------TT
i Hylobates_agilis.k141_1136966                         C 0 C 0
s Hylobates_klossii.k141_468230                              4909  9 +      5464 A------CA-A--G-TG--------------TT
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14630255  9 -  25970782 A------CA-A--G-TG--------------TT
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            2806  9 +      4161 A------CA-A--G-TG--------------TT
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                    11774  2 +     22540 -------------------------------CT
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7132039  3 +  13083262 ----------------G--------------TT
i Ictidomys_tridecemlineatus.JH393315.1                 I 4 C 0
s Indri_indri.k141_2197838                                   3268  9 +      3484 A------TA-A--A-TG--------------TT
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              15357  8 +     17520 -------TA-A--A-TG--------------TT
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8580858  9 +  11848649 A------TT-A--G-TA--------------TT
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               29986  8 +     37189 -------TA-A--A-TG--------------TT
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          55683  9 -    147782 A------CA-A--A-TG--------------TT
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    9049  9 +     26176 A------TA-A--A-TG--------------CG
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 I 479
s Lemur_catta.scaffold_1                                258413088  9 - 285822530 A------TA-A--A-TG--------------TT
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        30409  9 +     39228 A------TA-A--A-TG--------------TT
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            59773  9 +     63517 A------TA-A--A-TG--------------TT
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        38154  9 -     38897 A------TA-A--A-TG--------------TT
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      4199  9 -     13103 A------TA-A--A-TG--------------TT
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3094404  9 -   3498232 A------TC-A--A-TG--------------TT
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_470947                     424  9 -      1692 T------TA-T--A-TA--------------TT
i Lepus_americanus.LepAme_scaffold_470947               C 0 C 0
s Lipotes_vexillifer.KE558548.1                            142279  8 +   3060487 -------TA-A--A-TG--------------TT
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19254153  9 +  19376315 A------CA-A--A-TG--------------TT
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           16925  9 +     84689 A------TA-A--A-TT--------------TT
i Loris_lydekkerianus.k141_550999                       I 2 C 0
s Loris_tardigradus.ctg97                                 3784658  9 +   6799190 A------TA-A--A-TT--------------TT
i Loris_tardigradus.ctg97                               I 2 C 0
s Loxodonta_africana.GL010040.1                          20600989  9 -  62548349 G------TA-T--A-TT--------------CT
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11097653  9 +  39895028 A------TC-A--G-TG--------------TT
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             25902  9 +     74745 A------CA-A--A-TA--------------TT
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12712365  9 +  12821369 A------CA-A--A-TA--------------TT
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                4938  9 -     26467 A------CA-A--A-TG--------------TT
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           52809  9 +     63263 A------CA-A--A-TG--------------TT
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 4919  9 -     26361 A------CA-A--A-TG--------------TT
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_2667654                                1222 10 -      5626 A------CA-A--AATG--------------TT
i Macaca_leonina.k141_2667654                           C 0 C 0
s Macaca_maura.k141_251854                                  51338  9 -     79256 A------CA-A--A-TG--------------TT
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196041436  9 + 196197964 A------CA-A--A-TG--------------TT
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11451606  9 +  11645122 A------CA-A--A-TG--------------TT
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                  10292  9 -     46448 A------CA-A--A-TG--------------TT
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                7954  9 -     13212 A------CA-A--A-TG--------------TT
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 21635  9 -     55006 A------CA-A--A-TG--------------TT
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43847057 10 +  43892939 A------CA-A--AATG--------------TT
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               22920  9 -     24607 A------CA-A--A-TA--------------TT
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                              10289  9 -     27140 A------CA-A--A-TG--------------TT
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                704349  8 +    802869 A-------A-A--A-CA--------------tg
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 I 489
s Mandrillus_leucophaeus.scaffold125                     43443322  9 -  43563597 A------CA-A--A-TG--------------TT
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4456121  9 -   4543643 A------CA-A--A-TG--------------TT
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            154642  9 +    252755 A------TA-A--A-TG--------------TT
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             42241  9 +     58827 A------TA-A--A-TG--------------TT
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36879905  3 +  64221397 ----------------G--------------TT
i Marmota_marmota.CZRN01000005.1                        I 4 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       68168  9 -    234502 A------TA-A--A-CA--------------TT
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 I 449
s Mellivora_capensis.MelCap_flattened_line_15433             9058  9 -     87323 A------TC-T--A-TG--------------TT
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 3866  9 +    115071 A------TA-A--G-TG--------------CT
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1053503  9 -  26018355 T------TA-T--G-TG--------------CT
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    4948  8 -     12939 -------TA-A--A-TG--------------TT
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16516128  9 +  47401472 A------TA-A--C-TG--------------TT
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  47157 15 -     48017 ATGTTCATA-C--A-TA--------------AT
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               27299  9 -     32043 G------TA-A--A-TG--------------tg
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 I 470
s Microtus_ochrogaster.CM001673.1                        22826466  9 -  98408828 A------TA-A--A-TA--------------CT
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miniopterus_natalensis.LDJU01000022.1                   8215676  9 +  10048721 A------TA-C--A-TT--------------tg
i Miniopterus_natalensis.LDJU01000022.1                 C 0 I 474
s Miniopterus_schreibersii.MinSch_scaffold_24116            40135  9 +     45743 A------TA-C--A-TT--------------tg
i Miniopterus_schreibersii.MinSch_scaffold_24116        C 0 I 474
s Miopithecus_ogouensis.k141_2935907                         7872  9 +     29742 A------CA-A--A-TG--------------TT
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        19806  9 -    104932 A------TC-A--A-TG--------------TT
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     6822  9 -     12809 A------TA-A--C-TG--------------TT
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 152723  8 +    154973 -------TA-A--A-TG--------------TT
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                165820  9 +    265003 G------AG-A--G-TG--------------tg
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 I 462
s Moschus_moschiferus.MosMos_scaffold_78805                  9506  8 -     19904 -------TA-A--A-TG--------------TT
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  152858  9 -    168139 A------TC-A--A-TA--------------TG
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Murina_feae.MurFea_scaffold_2254                          26660  9 -    100666 T------TA-A--A-TG--------------Gg
i Murina_feae.MurFea_scaffold_2254                      C 0 I 255
s Mus_caroli.LT608236.1                                  70773748  9 +  92629107 A------TA-A--G-TG--------------CT
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75495809  9 +  98207768 A------TA-A--G-TG--------------TT
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67562542  9 +  89017189 A------TA-A--G-TG--------------CT
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74338513  9 +  97876770 A------TA-A--G-TG--------------TT
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             17156  4 +     98495 A------TA-A----------------------
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 I 2
s Mustela_putorius.JH417978.1                             4431151 10 -  28371801 A------TCCT--A-TG--------------TT
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     98230  9 -    117718 A------TA-A--A-TG--------------TT
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               973681  9 +   8389877 T------TA-A--A-TG--------------Gg
i Myotis_brandtii.KE161952.1                            C 0 I 473
s Myotis_davidii.KB114863.1                               5024757  9 +   6462685 T------TA-A--A-TG--------------Gg
i Myotis_davidii.KB114863.1                             C 0 I 476
s Myotis_lucifugus.GL429887.1                             3471178  9 -   3747815 T------TA-A--A-TG--------------Gg
i Myotis_lucifugus.GL429887.1                           C 0 I 476
s Myotis_myotis.MyoMyo_scaffold_6123                        16415  9 +     66751 T------TA-A--A-TG--------------Gg
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 I 474
s Myrmecophaga_tridactyla.MyrTri_scaffold_12795               777  9 -     87886 A------TA-A--G-TG--------------TT
i Myrmecophaga_tridactyla.MyrTri_scaffold_12795         C 0 C 0
s Nannospalax_galili.KL201303.1                            126216  9 +    362372 A------GA-A--G-TG--------------AT
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                              12133  9 +     48152 A------CA-A--A-TA--------------TT
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4493197  9 -  14209539 A------TC-A--A-TG--------------TT
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3957314  8 -   4490290 -------TA-A--A-TG--------------TT
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Noctilio_leporinus.NocLep_scaffold_12062                  53133  9 +     94413 a------ta-a--a-gt--------------tg
i Noctilio_leporinus.NocLep_scaffold_12062              C 0 I 337
s Nomascus_annamensis.k141_881190                             240  9 -      2113 A------CA-A--G-TG--------------TT
i Nomascus_annamensis.k141_881190                       C 0 C 0
s Nomascus_concolor.k141_256540                              8537  9 -      8966 A------CA-A--G-TG--------------TT
i Nomascus_concolor.k141_256540                         C 0 C 0
s Nomascus_gabriellae.k141_202556                             299  9 -      1580 A------CA-A--G-TG--------------TT
i Nomascus_gabriellae.k141_202556                       C 0 C 0
s Nomascus_siki_b.tarseq_453                             7790  9 +     12787 A------CA-A--G-TG--------------TT
i Nomascus_siki_b.tarseq_453                        C 0 C 0
s Nomascus_siki_a.k141_421408                                  2392  9 +     16235 A------CA-A--G-TG--------------TT
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                40530  9 +   3668941 A------TC-A--G-TG--------------TT
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65573714  9 -  95554990 A------TA-A--A-TT--------------TT
i Nycticebus_bengalensis.LG16                           I 2 C 0
s Nycticebus_coucang.k141_6040852                            1350  9 +      1868 A------TA-A--A-TT--------------TT
i Nycticebus_coucang.k141_6040852                       I 2 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65681896  9 +  89412551 A------TA-A--A-TT--------------TT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     I 2 C 0
s Ochotona_princeps.JH802095.1                            5001729  9 -  23139505 C------TG-T--G-TA--------------TT
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3693374  9 +  10294119 A------TA-G--C-TG--------------TT
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             687447  9 -   3126709 A------TC-A--A-TG--------------TT
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1086496  8 +   1425656 -------TA-A--A-TG--------------TT
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         44568  8 +     78940 -------TG-A--A-TG--------------TT
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  132273  9 +    145789 A------TA-A--G-TA--------------CT
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  45215  9 +     62360 A------TA-A--G-TG--------------CC
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7230988  8 -   7562323 -------TA-A--A-TG--------------TT
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_371885              2207  9 +      3658 A------TA-A--A-TG--------------GT
i Orycteropus_afer.OryAfe_flattened_line_371885         C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141885695  9 + 163896628 T------TA-T--A-TA--------------TT
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      317662  9 -    505867 A------TC-A--G-TG--------------TT
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        6843  9 -     53940 A------TA-A--A-TT--------------TT
i Otolemur_crassicaudatus.k141_505435                   I 2 C 0
s Otolemur_garnettii.GL873528.1                          18014808  9 -  38779656 a------ta-a--a-tt--------------tt
i Otolemur_garnettii.GL873528.1                         I 2 C 0
s Ovis_aries.CM001582.2                                 134085711  8 - 275406953 -------TA-A--A-TG--------------TT
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      86963  8 +    140051 -------TA-A--A-TG--------------TT
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127580214  9 - 205426864 A------CA-A--A-TG--------------TT
i Pan_paniscus.CM003386.1                               I 6 C 0
s Pan_troglodytes.CM009241.2                            120157375  9 - 196562556 A------CA-A--A-TG--------------TT
i Pan_troglodytes.CM009241.2                            I 6 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  42424  9 +    295523 T------TC-A--A-TG--------------TT
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3646238  9 +  18214204 A------TC-A--A-TG--------------TT
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5035875  9 -   6340057 A------TC-A--A-TG--------------TT
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1074602  8 -   1292953 -------TA-A--A-TG--------------TT
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188162114  9 - 188283584 A------CA-A--A-TG--------------TT
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              5204  9 +     25005 A------CA-A--A-TG--------------TT
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47519486  9 +  47705337 A------CA-A--A-TG--------------TT
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 73479  9 -    104429 A------CA-A--A-TG--------------TT
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   12009  9 +     14967 A------CA-A--A-TG--------------TT
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_899489                                   679  9 -     13896 A------CA-A--A-TG--------------TT
i Papio_ursinus.k141_899489                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    123890  9 -    135482 A------TC-A--A-TG--------------TT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          12498  9 -     23713 A------TA-A--A-TG--------------TT
i Perodicticus_ibeanus.k141_117958                      I 2 C 0
s Perodicticus_potto.k141_1136815                           13649  9 +     61070 A------TA-A--A-TG--------------TT
i Perodicticus_potto.k141_1136815                       I 2 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       3925 10 +     49596 T------TAAT--G-TA--------------TC
i Perognathus_longimembris.PerPac_flattened_line_19359  I 3 C 0
s Peromyscus_maniculatus.KI615458.1                       2841029  9 -   3366660 A------TA-A--G-TG--------------CC
i Peromyscus_maniculatus.KI615458.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    19782  9 -     36578 A------TA-A--A-TG--------------TT
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              5448  8 +      8220 -------TA-A--A-TG--------------TT
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Piliocolobus_badius.k141_1987485                           5667  9 -      5908 A------CA-A--A-TA--------------TT
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       6286  9 -     17985 A------CA-A--A-TA--------------TT
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            5653  9 +      7694 A------CA-A--A-TA--------------TT
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26744136  9 +  26888534 A------CA-A--A-TA--------------TT
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306           101911  9 +    112873 A------TA-A--G-TG--------------tg
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 I 464
s Pithecia_albicans.k141_991845                             45833  9 -     61926 A------CA-A--A-TG--------------TT
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        27209  9 +     78826 A------CA-A--A-TG--------------TT
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                             11264  9 -     15800 A------CA-A--A-TG--------------TT
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        14463  9 -     16101 A------CA-A--A-TG--------------TT
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          7692  9 +      9673 A------CA-A--A-TG--------------TT
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13476685  9 -  19735023 A------CA-A--A-TG--------------TT
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           15595  9 -     31692 A------CA-A--A-TG--------------TT
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990          11956  8 +     21690 -------TA-A--A-TG--------------TT
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       27771  9 +     44506 A------CA-A--A-TG--------------TT
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        27984  9 +     67491 A------CA-A--A-TG--------------TT
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      18223  9 -     98129 A------CA-A--A-TG--------------TT
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     27824  9 +    147771 A------CA-A--A-TG--------------TT
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         4459  9 -     43940 A------CA-A--A-TG--------------TT
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          8542  9 -     55515 A------CA-A--A-TG--------------TT
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         27896  9 +    152463 A------CA-A--A-TG--------------TT
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       5700  9 -    119457 A------CA-A--A-TG--------------TT
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         17618  9 +    134592 A------CA-A--A-TG--------------TT
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          28206  9 -     75465 A------CA-A--A-TG--------------TT
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              192842  9 -    373494 A------CA-A--A-TG--------------TT
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19813495  9 +  19899266 A------CA-A--A-TG--------------TT
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               9415  9 -     15069 A------CA-A--A-TA--------------TT
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              9530  9 +     14865 A------CA-A--A-TA--------------TT
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                6531  9 -      9567 A------TA-A--A-TG--------------CT
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6854464  9 +  12164890 a------ca-a--a-ta--------------tt
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    674038  9 -   2312742 A------TA-A--A-TG--------------TT
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         9562  9 +     11805 A------TA-A--A-TG--------------TT
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           48892  9 +     52369 A------TA-A--A-TG--------------TT
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         41279  9 -     44753 A------TA-A--A-TG--------------TT
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            23202  9 +     27322 A------TA-A--A-TG--------------TT
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       22854  9 -     53241 A------TA-A--A-TG--------------TT
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         45117  9 -     48185 A------TA-A--A-TG--------------TT
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           40842  9 +     77221 A------TA-A--A-TG--------------CT
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            8484  9 -     27784 G------TA-C--A-TG--------------tg
i Pteronotus_parnellii.KE867983.1                       C 0 I 476
s Pteronura_brasiliensis.PteBra_flattened_line_1343        252803 10 -    344369 A------TCCT--A-TG--------------TT
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13249461  8 -  17261082 a-------a-a--a-tg--------------tg
i Pteropus_alecto.KB031157.1                            C 0 I 583
s Pteropus_vampyrus.KN525959.1                             607412  8 -   3946241 a-------a-a--a-tg--------------tg
i Pteropus_vampyrus.KN525959.1                          C 0 I 2333
s Puma_concolor.QAVW01000427.1                          131542565  9 - 161321710 A------TC-A--A-TG--------------TT
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             33521  9 +     56732 A------CA-A--A-TA--------------TT
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6810018  9 +   6970761 A------CA-A--A-TA--------------TT
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             9407  9 +     18040 A------CA-A--A-TA--------------TT
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                23344  8 +     68503 -------TA-A--A-TG--------------TT
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13921237  2 +  90463843 ---------------T----------------G
i Rattus_norvegicus.chr11                               I 2 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1795288  9 +   2252614 A------TA-A--A-cg--------------tg
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 I 858
s Rhinopithecus_bieti.k119_554384                            3786  9 -     17045 A------CA-A--A-TA--------------TT
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206381273  9 - 206558726 A------CA-A--A-TA--------------TT
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44860176  9 -  45163003 A------CA-A--A-TA--------------TT
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                22820  8 +    109198 a-------a-a--a-tg--------------tg
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 I 430
s Saiga_tatarica.SaiTat_scaffold_371890                      4230  8 -      4338 -------TA-A--A-TG--------------TT
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15678216  9 -  43202129 A------CA-A--A-TG--------------CT
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                       10130  9 +     34089 A------CA-A--A-TG--------------CT
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                             10069  9 -     60842 A------CA-A--A-TG--------------CT
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                             10163  9 +     67014 A------CA-A--A-TG--------------CT
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                             10140  9 +     60816 A------CA-A--A-TG--------------CT
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                10077  9 -     76454 A------CA-A--A-TG--------------CT
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17346849  9 -  30362882 A------CA-A--A-TG--------------TT
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         26170  9 -     62485 A------CA-A--A-TG--------------TT
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   42081  9 -    114521 A------TC-A--A-GG--------------TG
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        7022  9 +     15331 A------CA-A--A-TA--------------TT
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      12397  9 +     20762 A------CA-A--A-TA--------------TT
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         122401 11 +    130994 A------CA-AATA-TA--------------TT
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           41181  9 +     46263 A------CA-A--A-TA--------------TT
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     34326  9 +     42640 A------CA-A--A-TA--------------TT
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        17348  9 +     30600 A------CA-A--A-TA--------------TT
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  107427  9 -    120886 A------TA-A--G-TG--------------CT
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            26731  9 +    739146 G------TA-A--A-TG--------------TG
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17777061  9 -  27805282 A------CA-A--A-GT--------------AG
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2245740  3 +   2842873 ----------------G--------------TT
i Spermophilus_dauricus.KZ294190.1                      I 4 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             241568  9 -    276980 A------AC-C--A-TG--------------TT
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            35762  9 +     62062 A------TC-A--A-TA--------------TG
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189277985  9 + 218635234 A------TA-C--A-TG--------------TT
i Sus_scrofa.CM000824.4                                 I 235 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                4756  9 +     20549 A------TA-A--G-TG--------------tg
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 I 466
s Tamandua_tetradactyla.TamTet_scaffold_26877               19011  9 +     45698 A------TA-A--G-TG--------------TT
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      813360  9 +   1148477 A------TA-A--A-TG--------------TT
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  63996  9 +     99546 A------TA-A--A-TG--------------TT
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               32860  9 +     42269 a------ta-a--a-ca--------------ga
i Tarsius_lariang.k141_609102                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194013647  9 - 194193292 A------CA-A--A-TG--------------TT
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             40879  9 -     47444 A------TA-A--A-TG--------------TT
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                  2141  9 -      3104 A------TA-A--G-TG--------------TT
i Tolypeutes_matacus.TolMat_scaffold_475685             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  140487  9 -    259118 G------TA-A--A-GG--------------TG
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 I 457
s Trachypithecus_auratus.k141_738098                        30669  9 +     38948 A------CA-A--A-TA--------------TT
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   24229  9 -     32910 A------CA-A--A-TA--------------TT
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      6130  9 -     12939 A------CA-A--A-TA--------------TT
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       5558  9 -     14244 A------CA-A--A-TA--------------TT
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           46951  9 -     54611 A------CA-A--A-TA--------------TT
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        4752  9 -     11566 A------CA-A--A-TA--------------TT
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     6936  9 -     15592 A------CA-A--A-TA--------------TT
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          5588  9 +     14371 A------CA-A--A-TA--------------TT
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   3874  9 +     12481 A------CA-A--A-TA--------------TT
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        3855  9 -     24393 A------CA-A--A-TA--------------TT
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       8999  9 -     28054 A------CA-A--A-TA--------------TT
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44663783  9 -  44834318 A------CA-A--A-TA--------------TT
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       6095  9 +     13828 A------CA-A--A-TA--------------TT
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                  11829  8 +     90398 -------TA-A--A-TG--------------TT
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16092068  9 +  31416278 A------TA-A--A-TG--------------CT
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2802776  9 -   3938065 A------TA-T--A-TG--------------TC
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                   11600  9 +     13056 A------TA-C--A-CG--------------TC
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69319718  8 -  96451834 -------TA-A--A-TG--------------TT
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                    2423  9 +    136657 A------TC-A--A-GA--------------TG
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 C 0
s Ursus_maritimus.KK498671.1                              6523212  9 +  28682327 A------TC-A--G-TG--------------TT
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                 11129  9 -     20643 A------TA-A--A-TG--------------TT
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             30664  9 -     33872 A------TA-A--A-TG--------------TT
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1530753  3 -   2331223 ----------------G--------------TT
i Vicugna_pacos.KN269600.1                              I 2 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                146888  9 -    281493 A------TC-A--G-TG--------------TT
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       133231  4 -    134049 A------TG-A----------------------
i Xerus_inauris.XerIna_scaffold_7898                    C 0 I 3
s Zalophus_californianus.ZalCal_flattened_line_4097        222308  9 -    227762 A------TC-A--A-TG--------------TT
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_202118                     2829  9 -      3360 G------TC-C--G-TG--------------TT
i Zapus_hudsonius.ZapHud_scaffold_202118                C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            4311  8 -     13665 -------TA-A--A-TG--------------TT
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Erinaceus_europaeus.JH835290.1                         11544365  0 +  16010500 C
e Elephantulus_edwardii.JH947210.1                        7837010 301 +  15467074 I
e Hylobates_pileatus_a.tarseq_592                             37267 2881 -     60944 I
e Symphalangus_syndactylus.tarseq_24                        20205  0 -  13920577 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               19237 7 +    209709 GACCAC-A
s Acinonyx_jubatus.LLWD01000356.1                         2042091 6 +   3721120 AACGAC--
i Acinonyx_jubatus.LLWD01000356.1                       C 0 I 1
s Acomys_cahirinus.AcoCah_scaffold_1625                    119749 7 -    189883 TACCTC-C
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10665954 6 +  23371972 AACCAC--
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 I 1
s Ailurus_fulgens.LNAC01000003.1                          7102907 6 -  16596857 AACCAC--
i Ailurus_fulgens.LNAC01000003.1                        C 0 I 1
s Allactaga_bullata.AllBul_scaffold_141108                   3114 7 -      7259 CACCAC-A
i Allactaga_bullata.AllBul_scaffold_141108              I 9 I 54
s Allenopithecus_nigroviridis.k141_2469532                   7134 7 -     60446 GACCAC-A
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         7848 7 -     29318 GACCAC-A
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         6786 7 +     38766 GACCAC-A
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          7744 7 -     80423 GACCAC-A
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              2686 7 +     19852 GACCAC-A
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                4902 7 -     12443 GACCAC-A
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                             2229 7 +      5070 GACCAC-A
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_1458234                                   0 7 +     11617 GACCAC-A
i Alouatta_juara.k141_1458234                           N 0 C 0
s Alouatta_macconnelli.k141_2318944                          4711 7 -     24210 GACCAC-A
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_494922                             1215 7 -      8325 GACCAC-A
i Alouatta_nigerrima.k141_494922                        C 0 C 0
s Alouatta_palliata.k141_405616                              7110 7 +     16794 GACCAC-A
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_347198                             1162 7 +      9111 GACCAC-A
i Alouatta_puruensis.k141_347198                        C 0 C 0
s Alouatta_seniculus.k141_790278                             6410 7 -      9835 GACCAC-A
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3529123 6 +   4113121 AACCAC--
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      395538 6 -    631301 AATCAT--
i Anoura_caudifer.AnoCau_scaffold_422                   I 466 I 235
s Antilocapra_americana.AntAmePen_scaffold_27338             6536 5 +     55446 -accac--
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 68018 7 +     78111 GACCAC-A
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                           10959 7 +     22701 GACCAC-A
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5754928 7 +   9889416 gaccac-a
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                            11507 7 -    104377 GACCAC-A
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                              11536 7 +     23246 GACCAC-A
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     4156 7 +     11424 AACCAC-A
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        8117 7 +      9265 AACCAC-A
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                13850 6 -     29036 AACCAT--
i Artibeus_jamaicensis.ArtJam_scaffold_41619            I 470 I 5
s Ateles_geoffroyi_b.tarseq_2582                             9544820 7 +  39197703 GACCAC-A
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             66094 7 +     85812 GACCAC-A
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                17104 7 +     89302 GACCAC-A
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             21608 7 -     58268 GACCAC-A
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             69602 7 +    119057 GACCAC-A
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              11571 7 -     25888 GACCAC-A
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                12665 7 -     16375 AACCAC-A
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               6281 7 +      6337 AACCAC-A
i Avahi_peyrierasi.k141_798820                          C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26386552 6 +  51448160 AACCAC--
i Balaenoptera_acutorostrata.KI537095.1                 C 0 I 1
s Balaenoptera_bonaerensis.DF502048.1                       11726 6 -     13118 AACCAC--
i Balaenoptera_bonaerensis.DF502048.1                   C 0 I 1
s Beatragus_hunteri.BeaHun_scaffold_21644                   51323 6 -     72089 AACCAC--
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   306048 6 -   6870073 AACCAT--
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22960154 6 + 161108492 AACCAC--
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     422333 6 +    998990 AACCAC--
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22668806 6 + 158972876 AACCAC--
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               677656 6 +   1914593 AACCAT--
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               119434 7 -    171031 GACCAC-A
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 18454 7 +    125063 GACCAC-A
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                20501 7 -    216513 GACCAC-A
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       13044 7 -    134917 GACCAC-A
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3225648 6 -   8989139 AGCCAC--
i Camelus_bactrianus.KN276303.1                         C 0 I 1
s Camelus_dromedarius.KN271192.1                           403348 6 -  15254737 AGCCAC--
i Camelus_dromedarius.KN271192.1                        C 0 I 1
s Camelus_ferus.KB016973.1                                2979086 6 +   6889770 AGCCAC--
i Camelus_ferus.KB016973.1                              C 0 I 1
s CanFam4.chr31                                          11528811 6 +  39901454 AACCAC--
i CanFam4.chr31                                         C 0 I 21
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   23785 6 +     87036 AACCAC--
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 I 21
s Canis_lupus_dingo.QKWQ01001993.1                       11275708 6 -  35597290 AACCAC--
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 I 21
s Canis_lupus_familiaris.chr31                           11098206 6 +  39895921 AACCAC--
i Canis_lupus_familiaris.chr31                          C 0 I 21
s Canis_lupus_orion.HG994411.1                           16464990 6 -  44759192 AACCAC--
i Canis_lupus_orion.HG994411.1                          C 0 I 21
s Capra_aegagrus.CM003214.1                              21336557 6 + 157394656 AACCAC--
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135714910 6 - 157403528 AACCAC--
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          315009 7 +    345090 AGCCAT-A
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               64829 6 +     67245 AACCAT--
i Carollia_perspicillata.CarPer_scaffold_4436           I 468 I 1
s Castor_canadensis.CasCan_scaffold_1326                     1659 7 -    202837 AACCAT-A
i Castor_canadensis.CasCan_scaffold_1326                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   165614 6 -    276539 AACCAC--
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 I 1
s Cavia_aperea.AVPZ01000278.1                            15791892 7 -  24422027 AACCAT-G
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15803837 7 -  24440124 AACCAT-G
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       182009 7 +    436027 AACCAT-G
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18897170 7 -  29618158 GACCAC-A
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                13820 7 -     26817 GACCAC-A
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                18063 7 +     25043 GACCAC-A
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                        14046 7 +     21754 aaccat-a
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4370637 6 +   7569818 GAGCAC--
i Ceratotherium_simum.JH767818.1                        C 0 I 1
s Ceratotherium_simum_cottoni.CerCot_scaffold_171732          794 6 +      8380 GAGCAC--
i Ceratotherium_simum_cottoni.CerCot_scaffold_171732    C 0 I 1
s Cercocebus_atys.KQ010443.1                              6561073 7 +   6739814 GACCAC-A
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      32550 7 +     60454 GACCAC-A
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          7754 7 -     21101 GACCAC-A
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         65064 7 -    107033 GACCAC-A
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        7925 7 -     17608 GACCAC-A
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          5093 7 +     45019 GACCAC-A
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           5361 7 +     15177 GACCAC-A
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          7975 7 +     16677 GACCAC-A
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           30163 7 +     35983 GACCAC-A
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11996696 7 +  12117833 GACCAC-A
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46483678 7 +  46592721 GACCAC-A
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                       1781 7 -     27215 GACCAC-A
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       7989 7 +     35577 GACCAC-A
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        7783 7 -     25661 GACCAC-A
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        7947 7 -     17744 GACCAC-A
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        27316 7 +     37128 GACCAC-A
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           6303 7 -      6963 AACCAC-A
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           64881 7 -     68416 AACCAC-A
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_854352                            1182 7 +     27737 AACCAC-A
i Cheirogaleus_medius.k141_854352                       C 0 C 0
s Cheracebus_lucifer.k141_619653                            11128 7 -     18223 GACCAC-A
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              2869 7 +    188999 GACCAC-A
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           47168 7 +     57117 GACCAC-A
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          51848 7 +     54541 GACCAC-A
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15966593 7 +  43084221 aatcaC-A
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         76649 7 +    196370 GACCAC-A
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          20830 7 +     40510 GACCAC-A
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15145509 7 -  15256731 GACCAC-A
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      39973 7 -     53260 GACCAC-A
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101150532 7 + 101219884 GACCAC-A
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                20360 7 -     21363 AACCAC-A
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           765664 7 +    964067 AACCAC-A
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_304221              3309 7 -      7053 GACCAC-A
i Chrysochloris_asiatica.ChrAsi_scaffold_304221         C 0 C 0
s Colobus_angolensis.KN985967.1                          10890302 7 +  10971483 GACCAC-A
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147668230 7 + 156195979 GACCAC-A
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            20213 7 +     23629 GACCAC-A
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60624623 6 +  78930452 AACCAC--
i Condylura_cristata.JH655880.1                         C 0 I 1
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         5506 6 -      5782 aactat--
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    I 473 I 1
s Cricetomys_gambianus.CriGam_scaffold_949                 284653 7 -    399297 CACCAC-C
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53036939 7 +  72327488 CACCAG-C
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              4495 6 -     22648 AAGCAT--
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 I 20
s Cryptoprocta_ferox.CryFer_flattened_line_19014            60023 6 -     70449 AATGAC--
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 I 1
s Ctenodactylus_gundi.CteGun_scaffold_447                  216788 7 -    956709 AACCAC-A
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 38310 7 -     67205 AACCAC-A
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                23126 7 +     26546 AATCAC-A
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             64270 7 -    236241 AACTGC-A
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          187361 7 -   6883506 AACCAC-A
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16850827 7 +  31942871 AACCAC-A
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80043138 6 -  96802777 AACCAC--
i Delphinapterus_leucas.KZ290064.1                      C 0 I 1
s Desmodus_rotundus.KZ672188.1                           18704050 6 -  18957592 AACCGT--
i Desmodus_rotundus.KZ672188.1                          I 467 I 1
s Dicerorhinus_sumatrensis.PEKH010003161.1                 329036 6 +    993696 GATCAC--
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 I 1
s Diceros_bicornis.DicBicMic_scaffold_9545                   9670 6 +    151128 GAACAC--
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 I 1
s Dinomys_branickii.DinBra_scaffold_1996                   162205 7 +    228994 AACCAC-A
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3661936 7 +   4240102 CATCGC-A
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  4290 7 -     11986 CATCGC-A
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                42837 7 -     73477 AACCAC-T
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           23007289 7 -  44670279 GACCAC-A
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 16248 6 +     24177 AACTAC--
i Eidolon_helvum.KE772537.1                             I 490 I 1
s Elaphurus_davidianus.JRFZ01086400.1                     1499118 6 +   1727528 AACCAC--
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        245641 7 -    369425 CACCAC-C
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01076532.1                           1992 7 +      9159 CACCAC-C
i Ellobius_talpinus.LOJH01076532.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85879973 6 +  99434291 AACCCC--
i Enhydra_lutris.KZ291749.1                             C 0 I 1
s Eptesicus_fuscus.JH977687.1                             4711836 6 +   6522550 AACCAT--
i Eptesicus_fuscus.JH977687.1                           I 479 I 2
s Equus_asinus.JREZ01000062.1                             5858896 6 -   7175178 GACCAC--
i Equus_asinus.JREZ01000062.1                           C 0 I 1
s Equus_caballus.CM000402.2                              13357382 6 +  41866177 gacCAC--
i Equus_caballus.CM000402.2                             C 0 I 1
s Equus_przewalskii.ATBW01073585.1                          18872 6 +     92910 gacCAC--
i Equus_przewalskii.ATBW01073585.1                      C 0 I 1
s Erythrocebus_patas.Contig8                             48782542 7 -  48907691 GACCAC-A
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          321397 6 +    330699 AACCAC--
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 I 1
s Eubalaena_japonica.EubJap_flattened_line_7756             67849 6 +     89355 AACCAC--
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 I 1
s Eulemur_albifrons.k141_715837                             10947 7 +     13586 AACCAC-A
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_419870                                 55 7 +      2668 AACCAC-A
i Eulemur_collaris.k141_419870                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            17343 7 +     36558 AACCAC-A
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            13665 7 +     60246 AACCAC-A
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                17150 7 +    109717 AACCAC-A
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 5133 7 -     19505 AACCAC-A
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                21808 7 +     27497 AACCAC-A
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           24264 7 +     26808 AACCAC-A
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                38996 7 +     46535 AACCAC-A
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              21737 7 -     29447 AACCAC-A
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129901666 6 - 159252932 AACTAC--
i Felis_catus.CM001386.2                                C 0 I 1
s Felis_catus_fca126.CM031420.1                         129288643 6 - 158578461 AACTAC--
i Felis_catus_fca126.CM031420.1                         C 0 I 1
s Felis_nigripes.FelNig_flattened_line_8080                 29833 6 +     52776 AACGAC--
i Felis_nigripes.FelNig_flattened_line_8080             C 0 I 1
s Fukomys_damarensis.KN123630.1                          13899686 7 -  19261668 AAACAC-A
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     216991 7 -    847004 AACCTC-A
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           19353 7 -     43889 AACCTC-A
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          16494 7 +     27357 AACCTC-A
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               161260 7 +    324696 AACCAC-A
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    188846 6 -    189561 AACCAC--
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           18187 7 -     18683 AACTAC-A
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                              10943 7 -     14630 GACCAC-A
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119658043 7 - 195582420 GACCAC-A
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   81488 7 +    118900 AATGAC-A
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         7739 7 +     10286 AACCAC-A
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             6220 7 -     11661 AACCAC-A
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                            11544 7 +     56096 AACCAC-A
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        34793 7 -     42470 AACCAC-A
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        51419 7 -     54384 AACCAC-A
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              25141 6 +     53719 AATGAC--
i Helogale_parvula.HelPar_flattened_line_22962          C 0 I 1
s Hemitragus_hylocrius.HemHyl_scaffold_16669                35937 6 -     91191 AACCAC--
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2563853 7 +  31725842 AACCAC-A
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               65433 7 +     73687 CACCAC-A
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              153218 6 +    277961 AACCAC--
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 I 1
s Hipposideros_armiger.JXIK01001085.1                      287179 6 -    477199 acccaT--
i Hipposideros_armiger.JXIK01001085.1                   I 484 I 1
s Hipposideros_galeritus.HipGal_scaffold_52959               4453 6 +     26078 ACCCAT--
i Hipposideros_galeritus.HipGal_scaffold_52959          I 485 I 1
s Hoolock_leuconedys.ctg79                                     10862 7 -   7690867 GACCAC-A
i Hoolock_leuconedys.ctg79                                 C 0 I 41
s Hyaena_hyaena.HyaHya_flattened_line_20729                 25577 6 -     67322 AATGAC--
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           23493 7 -    119109 AACCAT-G
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_1048809                               31 7 -      6555 GACCAC-A
i Hylobates_abbotti.k141_1048809                        C 0 C 0
s Hylobates_agilis.k141_1136966                              1438 7 +      9785 GACCAC-A
i Hylobates_agilis.k141_1136966                         C 0 C 0
s Hylobates_klossii.k141_468230                              4918 7 +      5464 GACCAC-A
i Hylobates_klossii.k141_468230                         C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14630264 7 -  25970782 GACCAC-A
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            2815 7 +      4161 GACCAC-A
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                    11776 7 +     22540 AACAAC-A
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7132042 7 +  13083262 AACCAC-C
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   3277 7 +      3484 AACCAC-A
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              15365 6 +     17520 AACCAC--
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 I 1
s Jaculus_jaculus.JH725517.1                              8580867 7 +  11848649 CACCAC-A
i Jaculus_jaculus.JH725517.1                            C 0 I 207
s Kogia_breviceps.KogBre_flattened_line_35920               29994 6 +     37189 AACCAC--
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 I 1
s Lagothrix_lagothricha.k141_12968                          55692 6 -    147782 GACCAC--
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    9537 6 +     26176 AACTAT--
i Lasiurus_borealis.LasBor_scaffold_59542               I 479 I 2
s Lemur_catta.scaffold_1                                258413097 7 - 285822530 AACCAC-A
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        30418 6 +     39228 AACCAC--
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            59782 7 +     63517 AACCAC-A
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        38163 7 -     38897 AACCAC-A
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      4208 7 -     13103 AACCAC-A
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3094413 6 -   3498232 AACCAC--
i Leptonychotes_weddellii.KB714749.1                    C 0 I 1
s Lepus_americanus.LepAme_scaffold_470947                     433 7 -      1692 AGCCAA-A
i Lepus_americanus.LepAme_scaffold_470947               C 0 I 19
s Lipotes_vexillifer.KE558548.1                            142287 6 +   3060487 AACCAC--
i Lipotes_vexillifer.KE558548.1                         C 0 I 1
s Lophocebus_aterrimus.ctg55                             19254162 7 +  19376315 GACCAC-A
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           16934 7 +     84689 AATCAC-A
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3784667 7 +   6799190 AATCAC-A
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20600998 7 -  62548349 AATCAC-A
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11097662 6 +  39895028 AACCAC--
i Lycaon_pictus.CM007556.1                              C 0 I 21
s Macaca_arctoides.k141_2201161                             25911 7 +     74745 GACCAC-A
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12712374 7 +  12821369 GACCAC-A
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                4947 7 -     26467 GACCAC-A
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           52818 7 +     63263 GACCAC-A
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 4928 7 -     26361 GACCAC-A
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_2667654                                1232 7 -      5626 GACCAC-A
i Macaca_leonina.k141_2667654                           C 0 C 0
s Macaca_maura.k141_251854                                  51347 7 -     79256 GACCAC-A
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196041445 7 + 196197964 GACCAC-A
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11451615 7 +  11645122 GACCAC-A
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                  10301 7 -     46448 GACCAC-A
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                7963 7 -     13212 GACCAC-A
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 21644 7 -     55006 GACCAC-A
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43847067 7 +  43892939 GACCAC-A
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               22929 7 -     24607 GACCAC-A
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                              10298 7 -     27140 GACCAC-A
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                704846 6 +    802869 AACTAT--
i Macroglossus_sobrinus.MacSob_scaffold_879             I 489 I 1
s Mandrillus_leucophaeus.scaffold125                     43443331 7 -  43563597 GACCAC-A
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4456130 7 -   4543643 GACCAC-A
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            154651 6 +    252755 AACCAC--
i Manis_javanica.JSZB01003966.1                         C 0 I 1
s Manis_pentadactyla.KN017078.1                             42250 6 +     58827 AACCAC--
i Manis_pentadactyla.KN017078.1                         C 0 I 1
s Marmota_marmota.CZRN01000005.1                         36879908 7 +  64221397 AACTGC-T
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       68626 6 -    234502 AATGAT--
i Megaderma_lyra.MegLyr_scaffold_3562                   I 449 I 1
s Mellivora_capensis.MelCap_flattened_line_15433             9067 6 -     87323 AATCTC--
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 I 1
s Meriones_unguiculatus.MerUng_scaffold_9483                 3875 7 +    115071 TACCAC-C
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1053512 7 -  26018355 TATCAC-C
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    4956 6 -     12939 AACCAC--
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 I 1
s Microcebus_murinus.CM007691.1                          16516137 7 +  47401472 AATCAC-A
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  47172 7 -     48017 AGCCAC-A
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               27778 6 -     32043 AACCAT--
i Micronycteris_hirsuta.MicHir_scaffold_37978           I 470 I 1
s Microtus_ochrogaster.CM001673.1                        22826475 7 -  98408828 CACCAC-C
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         7881 7 +     29742 GACCAC-A
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        19815 6 -    104932 AACCAC--
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 I 1
s Mirza_zaza.k141_593947                                     6831 7 -     12809 AACCAC-A
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 152731 6 +    154973 AACCAC--
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 I 1
s Mormoops_blainvillei.MorMeg_scaffold_2952                166291 6 +    265003 AACCAT--
i Mormoops_blainvillei.MorMeg_scaffold_2952             I 462 I 1
s Moschus_moschiferus.MosMos_scaffold_78805                  9514 6 -     19904 AACCAC--
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  152867 6 -    168139 AATGAC--
i Mungos_mungo.MunMun_flattened_line_8729               C 0 I 1
s Mus_caroli.LT608236.1                                  70773757 7 +  92629107 CACCAC-C
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75495818 7 +  98207768 CACCAC-C
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67562551 7 +  89017189 CACCTC-C
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74338522 7 +  97876770 CACCAC-C
i Mus_spretus.CM004110.1                                C 0 C 0
s Mustela_putorius.JH417978.1                             4431161 6 -  28371801 AACCCC--
i Mustela_putorius.JH417978.1                           C 0 I 1
s Myocastor_coypus.MyoCoy_scaffold_3653                     98239 7 -    117718 AACAAC-G
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               974163 6 +   8389877 AACCAT--
i Myotis_brandtii.KE161952.1                            I 473 I 2
s Myotis_davidii.KB114863.1                               5025242 6 +   6462685 AACCAT--
i Myotis_davidii.KB114863.1                             I 476 I 2
s Myotis_lucifugus.GL429887.1                             3471663 6 -   3747815 AACCAT--
i Myotis_lucifugus.GL429887.1                           I 476 I 2
s Myotis_myotis.MyoMyo_scaffold_6123                        16898 6 +     66751 AACCAT--
i Myotis_myotis.MyoMyo_scaffold_6123                    I 474 I 2
s Myrmecophaga_tridactyla.MyrTri_scaffold_12795               786 7 -     87886 AACCAC-A
i Myrmecophaga_tridactyla.MyrTri_scaffold_12795         C 0 C 0
s Nannospalax_galili.KL201303.1                            126225 7 +    362372 CACTAC-A
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                              12142 7 +     48152 GACCAC-A
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4493206 6 -  14209539 AACCAC--
i Neomonachus_schauinslandi.NINY01007774.1              C 0 I 1
s Neophocaena_asiaeorientalis.KZ688543.1                  3957322 6 -   4490290 AACCAC--
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 I 1
s Nomascus_annamensis.k141_881190                             249 7 -      2113 GACCAC-A
i Nomascus_annamensis.k141_881190                       C 0 C 0
s Nomascus_concolor.k141_256540                              8546 7 -      8966 GACCAC-A
i Nomascus_concolor.k141_256540                         C 0 C 0
s Nomascus_gabriellae.k141_202556                             308 7 -      1580 GACCAC-A
i Nomascus_gabriellae.k141_202556                       C 0 C 0
s Nomascus_siki_b.tarseq_453                             7799 7 +     12787 GACCAC-A
i Nomascus_siki_b.tarseq_453                        C 0 C 0
s Nomascus_siki_a.k141_421408                                  2401 7 +     16235 GACCAC-A
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                40539 6 +   3668941 AACCAC--
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 I 21
s Nycticebus_bengalensis.LG16                            65573723 8 -  95554990 AACCACAA
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_6040852                            1359 8 +      1868 AACCACAA
i Nycticebus_coucang.k141_6040852                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65681905 8 +  89412551 AACCACAA
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            5001738 7 -  23139505 ATCTGC-A
i Ochotona_princeps.JH802095.1                          C 0 I 21
s Octodon_degus.JH651621.1                                3693383 7 +  10294119 AACCAC-A
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             687456 6 -   3126709 AACCAC--
i Odobenus_rosmarus.KB229369.1                          C 0 I 1
s Odocoileus_virginianus.KZ101650.1                       1086504 6 +   1425656 AACTGC--
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         44576 6 +     78940 AACCAC--
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  132282 7 +    145789 TACCAC-C
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  45224 7 +     62360 CACCAC-T
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7230996 6 -   7562323 AACCAC--
i Orcinus_orca.KB316965.1                               C 0 I 1
s Orycteropus_afer.OryAfe_flattened_line_371885              2216 7 +      3658 AACCGT-A
i Orycteropus_afer.OryAfe_flattened_line_371885         C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141885704 7 + 163896628 AGCCAA-A
i Oryctolagus_cuniculus.CM000803.1                      C 0 I 20
s Otocyon_megalotis.JAEUCK010005121.1                      317671 6 -    505867 AACCAC--
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 I 21
s Otolemur_crassicaudatus.k141_505435                        6852 7 -     53940 AACCTC-A
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18014817 7 -  38779656 aaccTC-A
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134085719 6 - 275406953 AACCAC--
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      86971 6 +    140051 AACCAC--
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127580223 7 - 205426864 GACCAC-A
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120157384 7 - 196562556 GACCAC-A
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  42433 6 +    295523 AACGAC--
i Panthera_onca.PanOnc_flattened_line_1615              C 0 I 1
s Panthera_pardus.KV860323.1                              3646247 6 +  18214204 AACGAC--
i Panthera_pardus.KV860323.1                            C 0 I 1
s Panthera_tigris.KE721879.1                              5035884 6 -   6340057 AACGAC--
i Panthera_tigris.KE721879.1                            C 0 I 1
s Pantholops_hodgsonii.KE114631.1                         1074610 6 -   1292953 AACCAC--
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188162123 7 - 188283584 GACCAC-A
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              5213 7 +     25005 GACCAC-A
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47519495 7 +  47705337 GACCAC-A
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 73488 7 -    104429 GACCAC-A
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   12018 7 +     14967 GACCAC-A
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_899489                                   688 7 -     13896 GACCAC-A
i Papio_ursinus.k141_899489                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    123899 6 -    135482 AATGAC--
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 I 1
s Perodicticus_ibeanus.k141_117958                          12507 7 -     23713 AACCAC-A
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           13658 7 +     61070 AACCAC-A
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       3935 7 +     49596 AATCAC-A
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615458.1                       2841038 7 -   3366660 CACCAC-C
i Peromyscus_maniculatus.KI615458.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    19791 7 -     36578 AGCCAG-A
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              5456 6 +      8220 AACCAC--
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 I 1
s Piliocolobus_badius.k141_1987485                           5676 7 -      5908 GACCAC-A
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       6295 7 -     17985 GACCAC-A
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            5662 7 +      7694 GACCAC-A
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26744145 7 +  26888534 GACCAC-A
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306           102384 6 +    112873 AACCAC--
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        I 464 I 2
s Pithecia_albicans.k141_991845                             45842 7 -     61926 GACCAC-A
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        27218 7 +     78826 GACCAC-A
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                             11273 7 -     15800 GACCAC-A
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        14472 7 -     16101 GACCAC-A
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          7701 7 +      9673 GACCAC-A
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13476694 7 -  19735023 GACCAC-A
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           15604 7 -     31692 GACCAC-A
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990          11964 6 +     21690 AACCAC--
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 I 1
s Plecturocebus_bernhardi.k141_959214                       27780 7 +     44506 GACCAC-A
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        27993 7 +     67491 GACCAC-A
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      18232 7 -     98129 GACCAC-A
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     27833 7 +    147771 GACCAC-A
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         4468 7 -     43940 GACCAC-A
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          8551 7 -     55515 GACCAC-A
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         27905 7 +    152463 GACCAC-A
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       5709 7 -    119457 GACCAC-A
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         17627 7 +    134592 GACCAC-A
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          28215 7 -     75465 GACCAC-A
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              192851 7 -    373494 GACCAC-A
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19813504 7 +  19899266 GACCAC-A
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               9424 7 -     15069 GACCAC-A
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              9539 7 +     14865 GACCAC-A
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                6540 7 -      9567 AACCAC-G
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6854473 7 +  12164890 aagcAC-A
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    674047 7 -   2312742 AACCac-a
i Propithecus_coquerelli.NW_012147997.1                 C 0 C 0
s Propithecus_coronatus.k141_1353159                         9571 7 +     11805 AACCAC-A
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           48901 7 +     52369 AACCAC-A
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         41288 7 -     44753 AACCAC-A
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            23211 7 +     27322 AACCAC-A
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       22863 7 -     53241 AACCAC-A
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         45126 7 -     48185 AACCAC-A
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           40851 7 +     77221 TACCAC-C
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            8969 6 -     27784 AACCAT--
i Pteronotus_parnellii.KE867983.1                       I 476 I 1
s Pteronura_brasiliensis.PteBra_flattened_line_1343        252813 6 -    344369 AACCCC--
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 I 1
s Pteropus_alecto.KB031157.1                             13250052 6 -  17261082 aactat--
i Pteropus_alecto.KB031157.1                            I 583 I 1
s Pteropus_vampyrus.ABRP02213537.1                            314 6 -      2094 aactat--
i Pteropus_vampyrus.ABRP02213537.1                      n 2333 I 1
s Puma_concolor.QAVW01000427.1                          131542574 6 - 161321710 AACGAC--
i Puma_concolor.QAVW01000427.1                          C 0 I 1
s Pygathrix_cinerea.k141_374971                             33530 7 +     56732 GACCAC-A
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6810027 7 +   6970761 GACCAC-A
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             9416 7 +     18040 GACCAC-A
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                23352 6 +     68503 AACTAC--
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13921239 7 +  90463843 TACCAT-G
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1796155 6 +   2252614 ATCCAT--
i Rhinolophus_sinicus.LVEH01000179.1                    I 858 I 1
s Rhinopithecus_bieti.k119_554384                            3795 7 -     17045 GACCAC-A
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206381282 7 - 206558726 GACCAC-A
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44860185 7 -  45163003 GACCAC-A
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                23258 6 +    109198 AACTAT--
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            I 430 I 1
s Saiga_tatarica.SaiTat_scaffold_371890                      4238 6 -      4338 AACCAC--
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15678225 7 -  43202129 Gaccac-a
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                       10139 7 +     34089 GACCAC-A
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                             10078 7 -     60842 GACCAC-A
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                             10172 7 +     67014 GACCAC-A
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                             10149 7 +     60816 GACCAC-A
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                10086 7 -     76454 GACCAC-A
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17346858 7 -  30362882 GACCAC-A
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         26179 7 -     62485 GACCAC-A
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   42090 6 -    114521 AACCAC--
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 I 1
s Semnopithecus_entellus.k141_1572367                        7031 7 +     15331 GATCAC-A
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      12406 7 +     20762 GATCAC-A
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         122412 7 +    130994 GATCAC-A
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           41190 7 +     46263 GATCAC-A
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     34335 7 +     42640 GATCAC-A
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        17357 7 +     30600 GATCAC-A
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  107436 7 -    120886 CACCAC-C
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            26740 6 +    739146 AATCAC--
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17777070 6 -  27805282 AACCAC--
i Sorex_araneus.JH798170.1                              C 0 I 1
s Spermophilus_dauricus.KZ294190.1                        2245743 7 +   2842873 AACCAC-T
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             241577 6 -    276980 AACCAC--
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 I 1
s Suricata_suricatta.SurSur_flattened_line_20339            35771 6 +     62062 AATGAC--
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 I 1
s Sus_scrofa.CM000824.4                                 189277994 6 + 218635234 AACCAC--
i Sus_scrofa.CM000824.4                                 C 0 I 1
s Tadarida_brasiliensis.TadBra_scaffold_61492                5231 6 +     20549 AACCAC--
i Tadarida_brasiliensis.TadBra_scaffold_61492           I 466 I 1
s Tamandua_tetradactyla.TamTet_scaffold_26877               19020 7 +     45698 AACCAC-A
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      813369 6 +   1148477 GACCAC--
i Tapirus_indicus.TapInd_scaffold_176                   C 0 I 1
s Tapirus_terrestris.TapTer_scaffold_14939                  64005 6 +     99546 GACCAC--
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 I 1
s Tarsius_lariang.k141_609102                               32869 7 +     42269 agccat-a
i Tarsius_lariang.k141_609102                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194013656 7 - 194193292 GACCAC-A
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             40888 7 -     47444 AGTTAT-A
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                  2150 7 -      3104 AACCAC-A
i Tolypeutes_matacus.TolMat_scaffold_475685             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  140953 6 -    259118 AACTAT--
i Tonatia_saurophila.TonSau_scaffold_3334               I 457 I 1
s Trachypithecus_auratus.k141_738098                        30678 7 +     38948 GATCAC-A
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   24238 7 -     32910 GATCAC-A
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      6139 7 -     12939 GATCAC-A
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       5567 7 -     14244 GATCAC-A
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           46960 7 -     54611 GATCAC-A
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        4761 7 -     11566 GATCAC-A
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     6945 7 -     15592 GATCAC-A
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          5597 7 +     14371 GATCAC-A
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   3883 7 +     12481 GATCAC-A
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        3864 7 -     24393 GATCAC-A
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       9008 7 -     28054 GATCAC-A
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44663792 7 -  44834318 GATCAC-A
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       6104 7 +     13828 GATCAC-A
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                  11837 6 +     90398 AACCAC--
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 I 1
s Trichechus_manatus.JH594618.1                          16092077 7 +  31416278 AACCAC-A
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2802785 7 -   3938065 AACCCC-A
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                   11609 7 +     13056 AACCCC-A
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69319726 6 -  96451834 AACCAC--
i Tursiops_truncatus.MRVK01000923.1                     C 0 I 1
s Uropsilus_gracilis.UroGra_scaffold_4115                    2432 6 +    136657 AACCAC--
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 I 1
s Ursus_maritimus.KK498671.1                              6523221 6 +  28682327 AACCAC--
i Ursus_maritimus.KK498671.1                            C 0 I 1
s Varecia_rubra.k141_432109                                 11138 7 -     20643 AACCAC-A
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             30673 7 -     33872 AACCAC-A
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1530756 6 -   2331223 AGCCAC--
i Vicugna_pacos.KN269600.1                              C 0 I 1
s Vulpes_lagopus.VulLag_flattened_line_2045                146897 6 -    281493 AACCAC--
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 I 21
s Xerus_inauris.XerIna_scaffold_7898                       133238 7 -    134049 AAGCAC-T
i Xerus_inauris.XerIna_scaffold_7898                    I 3 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        222317 6 -    227762 AACCAC--
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 I 1
s Zapus_hudsonius.ZapHud_scaffold_202118                     2838 7 -      3360 CACCAC-A
i Zapus_hudsonius.ZapHud_scaffold_202118                C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            4319 6 -     13665 AACCAC--
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 I 1
e Erinaceus_europaeus.JH835290.1                         11544365 0 +  16010500 C
e Noctilio_leporinus.NocLep_scaffold_12062                  53142 337 +     94413 I
e Murina_feae.MurFea_scaffold_2254                          26669 255 -    100666 I
e Miniopterus_schreibersii.MinSch_scaffold_24116            40144 474 +     45743 I
e Miniopterus_natalensis.LDJU01000022.1                   8215685 474 +  10048721 I
e Elephantulus_edwardii.JH947210.1                        7837010 301 +  15467074 I
e Hylobates_pileatus_a.tarseq_592                             37267 2881 -     60944 I
e Muscardinus_avellanarius.MusAve_scaffold_9643             17160 2 +     98495 I
e Symphalangus_syndactylus.tarseq_24                        20205 0 -  13920577 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               19244 41 +    209709 AAG--ATGTT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATAT----A
s Acinonyx_jubatus.LLWD01000356.1                         2042098 44 +   3721120 CAA--GTGTT-TC-TGACTAGTA-G-C---A-AGAGC-CA-----T--T--ATAGTTATGTAC----A
i Acinonyx_jubatus.LLWD01000356.1                       I 1 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    119756 44 -    189883 AAA--ATATT-TT-GAGCTAATA-A-G---G-AAAAT-CA-----T--T--GAAGCTATTTCC----T
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10665961 44 +  23371972 CAA--ATGTT-TC-TGACTAGCA-G-G---A-ACAGC-------cat-t--ataattatgtat----a
i Ailuropoda_melanoleuca.LNAT01000321.1                 I 1 C 0
s Ailurus_fulgens.LNAC01000003.1                          7102914 44 -  16596857 CAA--ATGCT-TT-TGACTAGCA-G-G---A-AGAGc-------cat-t--ataattatgtaa----a
i Ailurus_fulgens.LNAC01000003.1                        I 1 C 0
s Allactaga_bullata.AllBul_scaffold_67806                    6962 44 +     22864 TAA--ATGTT-TC-TACCTATCA-A-G---A-ATTGT-CA-C------T--ACATCTATGAAC----A
i Allactaga_bullata.AllBul_scaffold_67806               I 7 C 0
s Allenopithecus_nigroviridis.k141_2469532                   7141 41 -     60446 AGA--ATGTT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATAT----A
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         7855 41 -     29318 AGA--ATGTT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATAT----A
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         6793 41 +     38766 AGA--ATGTT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATAT----A
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          7751 41 -     80423 AGA--ATGTT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATAT----A
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              2693 41 +     19852 AAA--ATATT-TA-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACCTAC----A
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                4909 41 -     12443 AAA--ATATT-TA-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACCTAC----A
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                             2236 41 +      5070 AAA--ATATT-TA-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACCTAC----A
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_1458234                                   7 41 +     11617 AAA--ATATT-TA-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACCTAC----A
i Alouatta_juara.k141_1458234                           C 0 C 0
s Alouatta_macconnelli.k141_2318944                          4718 41 -     24210 AAA--ATATT-TA-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACCTAC----A
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_494922                             1222 41 -      8325 AAA--ATATT-TA-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACCTAC----A
i Alouatta_nigerrima.k141_494922                        C 0 C 0
s Alouatta_palliata.k141_405616                              7117 41 +     16794 AAA--ATATT-TA-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACCTAC----A
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_347198                             1169 41 +      9111 AAA--ATATT-TA-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACCTAC----A
i Alouatta_puruensis.k141_347198                        C 0 C 0
s Alouatta_seniculus.k141_790278                             6417 41 -      9835 AAA--ATATT-TA-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACCTAC----A
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3529129 37 +   4113121 -AC--GCATG-TC-TGACTAGTA-G-A---A-ATAGCT-A-----T--T--A------TTTAC----A
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      395779 44 -    631301 TAA--ATGCT-TC-TCACTAGCA-G-G---T-GTAGC-CA-----T--C--ATAGTAGTTTAC----A
i Anoura_caudifer.AnoCau_scaffold_422                   I 235 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             6541 37 +     55446 -ac--ATATG-TC-TGACTAGTA-G-A---A-ATAGCT-A-----T--T--A------TTTAT----A
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 68025 41 +     78111 AAA--ATATT-TA-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACCTAC----A
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                           10966 41 +     22701 AAA--ATATT-TA-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACCTAC----A
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5754935 41 +   9889416 aaa--atatt-ta-tacctAGCA-G-A---A-ATAAT-----------T--ATAGTTACCTAC----A
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                            11514 41 -    104377 AAA--ATATT-TA-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACCTAC----A
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                              11543 41 +     23246 AAA--ATATT-TA-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACCTAC----A
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     4163 44 +     11424 AAA--ATGTT-TC-TACCTACCA-G-G---A-ATGAT--A----AT--T--ACAAGTATATGT----A
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        8124 35 +      9265 AAA--ATGTT-TT-TAACTAACA-G-G---A-ATAAT-----------T--ACAA------AT----A
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                13861 44 -     29036 TAA--ATGCT-TC-TCACTAGCA-G-G---T-GTAGC-CA-----T--C--ACAGTAGTTTAC----A
i Artibeus_jamaicensis.ArtJam_scaffold_41619            I 5 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9544827 41 +  39197703 AAA--ATATT-TA-TACCTAGCA-G-A---T-ATAAT-----------T--ATAGTTACCTAC----A
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             66101 41 +     85812 AAA--ATATT-TA-TACCTAGCA-G-A---T-ATAAT-----------T--ATAGTTACCTAC----A
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                17111 41 +     89302 AAA--ATATT-TA-TACCTAGCA-G-A---T-ATAAT-----------T--ATAGTTACCTAC----A
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             21615 41 -     58268 AAA--ATATT-TA-TACCTAGCA-G-A---T-ATAAT-----------T--ATAGTTACCTAC----A
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             69609 41 +    119057 AAA--ATATT-TA-TACCTAGCA-G-A---T-ATAAT-----------T--ATAGTTACCTAC----A
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              11578 41 -     25888 AAA--ATATT-TA-TACCTAGCA-G-A---T-ATAAT-----------T--ATAGTTACCTAC----A
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                12672 44 -     16375 AAA--ATGTT-TT-TACCTATCA-G-G---A-ATAAT--A----AT--T--ATGGTTATAAAT----A
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_798820                               6288 44 +      6337 TAA--ATGTT-TT-TACCTATCA-G-G---A-ATAAT--A----AT--T--ATAGTTATAAAT----A
i Avahi_peyrierasi.k141_798820                          C 0 N 0
s Balaenoptera_acutorostrata.KI537095.1                  26386559 42 +  51448160 CAC----GTG-TC-TGACTAGTA-G-G---A-ACAGC-C-G----T--T--ACAGTTATGTac----a
i Balaenoptera_acutorostrata.KI537095.1                 I 1 C 0
s Balaenoptera_bonaerensis.DF502048.1                       11733 42 -     13118 CAC----GTG-TC-TGACTAGTA-G-G---A-ACAGC-CA-----T--T--ACAGTTATGTac----a
i Balaenoptera_bonaerensis.DF502048.1                   I 1 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   51329 35 -     72089 -AC--ACA---TC-TGACTAGTA-G-A---A-ATAGCT-A-----T--T--A------TTTAC----A
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   306054 37 -   6870073 -GC--ACGTG-TC-TGACTAGTA-G-A---A-ATAACT-A-----T--T--A------TTTAC----A
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22960160 37 + 161108492 -GC--ACGTG-TC-TGACTAGTA-G-A---A-ATAACT-A-----T--T--A------TTTAC----A
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     422339 37 +    998990 -GC--ACGTG-TC-TGACTAGTA-G-A---A-ATAACT-A-----T--T--A------TTTAC----A
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22668812 37 + 158972876 -GC--ACGTG-TC-TGACTAGTA-G-A---A-ATAACT-A-----T--T--A------TTTAC----A
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               677662 37 +   1914593 -GC--ACGTG-TC-TGACTAGTA-G-A---A-ATAACT-A-----T--T--A------TTTAC----A
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               119441 41 -    171031 AAA--ATATT-TA-TACCTAGCC-G-A---A-ATAAT-----------T--ATAGTTGCCTAC----A
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 18461 41 +    125063 AAA--ATATT-TA-TACCTAGCC-G-A---A-ATAAT-----------T--ATAGTTGCCTAC----A
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                20508 41 -    216513 AAA--ATATT-TA-TACCTAGCC-G-A---A-ATAAT-----------T--ATAGTTGCCTAC----A
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       13051 41 -    134917 AAA--ATATT-TA-TACCTAGCC-G-A---A-ATAAT-----------T--ATAGTTGCCTAC----A
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3225655 44 -   8989139 CAA--GTGTT-TC-TGACTAGTA-A-G---A-ATATCT-A-----T--T--CCAGTCATGTAC----A
i Camelus_bactrianus.KN276303.1                         I 1 C 0
s Camelus_dromedarius.KN271192.1                           403355 44 -  15254737 CAA--GTGTT-TC-TGACTAGTA-A-G---A-ATATC-CA-----T--T--ACAGTCATGTAC----A
i Camelus_dromedarius.KN271192.1                        I 1 C 0
s Camelus_ferus.KB016973.1                                2979093 44 +   6889770 CAA--GTGTT-TC-TGACTAGTA-A-G---A-ATATCT-A-----T--T--CCAGTCATGTAC----A
i Camelus_ferus.KB016973.1                              I 1 C 0
s CanFam4.chr31                                          11528838 23 +  39901454 ------------------------------A-ACAGC-CA-----T--T--ATAATTACATAC----A
i CanFam4.chr31                                         I 21 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   23812 23 +     87036 ------------------------------A-ACAGC-CA-----T--T--ATAATTACATAC----A
i Canis_lupus_VD.CanFam_VD_scaffold_16982               I 21 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11275735 23 -  35597290 ------------------------------A-ACAGC-CA-----T--T--ATAATTACATAC----A
i Canis_lupus_dingo.QKWQ01001993.1                      I 21 C 0
s Canis_lupus_familiaris.chr31                           11098233 23 +  39895921 ------------------------------A-ACAGC-CA-----T--T--ATAATTACATAC----A
i Canis_lupus_familiaris.chr31                          I 21 C 0
s Canis_lupus_orion.HG994411.1                           16465017 23 -  44759192 ------------------------------A-ACAGC-CA-----T--T--ATAATTACATAC----A
i Canis_lupus_orion.HG994411.1                          I 21 C 0
s Capra_aegagrus.CM003214.1                              21336563 37 + 157394656 -AC--GCATG-TC-TGACTAGTA-G-A---A-ATAGCT-A-----T--T--A------TTTAC----A
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135714916 37 - 157403528 -AC--GCATG-TC-TGACTAGTA-G-A---A-ATAGCT-A-----T--T--A------TTTAC----A
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          315016 36 +    345090 TGA--TCATC-TT-AGAT--GCA-G-A---A-A--Ac-----------t--a-agaaccatat----g
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               64836 44 +     67245 TAA--ATGCT-CC-TCACTAGCA-G-G---T-GTAGC-CA-----T--C--ACAGTAGTGTAC----A
i Carollia_perspicillata.CarPer_scaffold_4436           I 1 C 0
s Castor_canadensis.CasCan_scaffold_1326                     1666 43 -    202837 TCA--ATGTT-TT-TACCTAGCA-G-G---A-ATGATT-A-----T--C--ATAGTTA-GTAC----T
i Castor_canadensis.CasCan_scaffold_1326                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   165621 44 -    276539 TAA--ATGTT-TC-TGACTAGTA-G-G---A-AGAAC---G--G-T--T--AAAGTTATGTAC----A
i Catagonus_wagneri.CatWag_scaffold_1305                I 1 C 0
s Cavia_aperea.AVPZ01000278.1                            15791899 44 -  24422027 TGA--ATATT-TC-TAACTATCA-A-G---A-ATAAT--A----AT--T--GTAGTTTTAAAC----C
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15803844 44 -  24440124 TGA--ATATT-TC-TAACTATCA-A-G---A-ATAAT--A----AT--T--GTAGTTTTAAAC----A
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       182016 44 +    436027 TGA--ATATT-TC-TAACTATCA-A-G---A-ATAAT--A----AT--T--GTAGTTTTAAAC----A
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18897177 41 -  29618158 AAA--ATATT-TG-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACCTAC----A
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                13827 41 -     26817 AAA--ATATT-TG-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACCTAC----A
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                18070 41 +     25043 AAA--ATATT-TG-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACCTAC----A
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                        14053 36 +     21754 tga--tcatc-tt-agat--gca-g-a---a-a--ac-----------t--a-agaaccatat----g
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4370644 44 +   7569818 CAA--ATATT-TC-TGACTAGCA-G-G---A-ATTGC-CA-----T--T--ATAGTTATGTGC----A
i Ceratotherium_simum.JH767818.1                        I 1 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_171732          801 44 +      8380 CAA--ATATT-TC-TGACTAGCA-G-G---A-ATTGC-CA-----T--T--ATAGTTATGTGC----A
i Ceratotherium_simum_cottoni.CerCot_scaffold_171732    I 1 C 0
s Cercocebus_atys.KQ010443.1                              6561080 41 +   6739814 AAA--ATGTT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATAT----A
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      32557 41 +     60454 AAA--ATGTT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATAT----A
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          7761 41 -     21101 AAA--ATGTT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATAT----A
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         65071 41 -    107033 AAA--ATGTT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATAT----A
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        7932 41 -     17608 AGA--ATGTT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGCTACATAT----A
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          5100 41 +     45019 AGA--ATGTT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATAT----A
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           5368 41 +     15177 AGA--ATGTT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATAT----A
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          7982 41 +     16677 AGA--ATGTT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATAT----A
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           30170 41 +     35983 AGA--ATGTT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGCTACATAT----A
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11996703 41 +  12117833 AGA--ATGTT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATAT----A
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46483685 41 +  46592721 AGA--ATGTT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGCTACATAT----A
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                       1788 41 -     27215 AGA--ATGTT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATAT----A
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       7996 41 +     35577 AGA--ATGTT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATAT----A
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        7790 41 -     25661 AGA--ATGTT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGCTACATAT----A
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        7954 41 -     17744 AGA--ATGTT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATAT----A
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        27323 41 +     37128 AGA--ATGTT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATAT----A
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           6310 39 -      6963 CT-----GTT-TC-TGACTAGGA-G-G---A-ATAAC--A----AT--T--A--GTTATATAC----A
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           64888 44 -     68416 CAA--ATATT-TT-TACCTATCA-G-G---A-ATAAT--A----AT--T--ATAGTTATAGGT----A
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_854352                            1189 44 +     27737 CAA--ATATT-TT-TACCTATCA-G-G---A-ATAAT--A----AT--T--ATAGTTATAGGT----A
i Cheirogaleus_medius.k141_854352                       C 0 C 0
s Cheracebus_lucifer.k141_619653                            11135 41 -     18223 AAA--ATATT-TA-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACCTAC----A
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              2876 41 +    188999 AAA--ATATT-TA-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACCTAC----A
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           47175 41 +     57117 AAA--ATATT-TA-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACCTAC----A
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          51855 41 +     54541 AAA--ATATT-TA-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACCTAC----A
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15966600 44 +  43084221 TGA--ATATT-TC-TAACTGTCA-G-G---A-ATAAT--A----AT--C--ATAGTTACATAC----A
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         76656 41 +    196370 AAA--ATATT-TA-TACCTAGCC-G-A---A-ATAAT-----------T--ATAGTTGCCTAC----A
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          20837 41 +     40510 AAA--ATATT-TA-TACCTAGCC-G-A---A-ATAAT-----------T--ATAGTTGCCTAC----A
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15145516 41 -  15256731 AGA--ATGTT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATAT----A
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      39980 41 -     53260 AGA--ATGTT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATAT----A
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101150539 41 + 101219884 AGA--ATGTT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATAT----A
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                20367 20 -     21363 CTA--ATGTT-TC-TGACTAGCA-G-------------------------------------------
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           765671 20 +    964067 CTA--ATGTT-TC-TGACTAGCA-G-------------------------------------------
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_304221              3316 44 -      7053 CTA--ACGTT-TC-AGACTAGGA-G-A---A-ATAAT-C------TT-C--ATTGTTATGTac----a
i Chrysochloris_asiatica.ChrAsi_scaffold_304221         C 0 I 2814
s Colobus_angolensis.KN985967.1                          10890309 41 +  10971483 AAA--ATGTT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATAT----A
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147668237 41 + 156195979 AAA--ATGTT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATAT----A
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            20220 41 +     23629 AAA--ACGTT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATAT----A
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60624630 44 +  78930452 CAA--ATGTT-TC-TGACTAGCA-G-G---A-ATAGC-CA-C------T--TTCATTATACAC----A
i Condylura_cristata.JH655880.1                         I 1 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         5513 44 -      5782 caa--aTGTT-CA-GGATTCACA-G-A---C-TTCAC-CA-----T--T--ATAGTTATGTTC----A
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    I 1 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 284660 44 -    399297 AAA--GTGTT-TT-GAGCTAATA-G-G---A-ATCAT-CA-----T--T--GAATCTCTGTCC----A
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53036946 44 +  72327488 AAA--ATGTT-TT-GAGCTAATA-G-G---A-ATCAT-CA-C------T--GAAGCTACACAC----A
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              4521 18 -     22648 --------------------------------ATAAA-CAG-------T--TTAAT-TTT-------A
i Crocidura_indochinensis.CroInd_scaffold_27484         I 20 I 1
s Cryptoprocta_ferox.CryFer_flattened_line_19014            60030 44 -     70449 CAA--ATGTT-TC-TGACTAGCA-G-G---A-ACAGC-CA-----T--T--ATGGTTATGTAC----A
i Cryptoprocta_ferox.CryFer_flattened_line_19014        I 1 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  216795 44 -    956709 CAA--ATGTT-TC-TGCCTGGAA-A-G---A-AGGAT---G---AT--T--ATACTTAAGTAC----A
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 38317 31 -     67205 TGA--ATGTT-TC-TAACTAGCA-G-A---A-ACAAT--A----AT--t-------------------
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 I 7
s Cuniculus_paca.CunPac_flattened_line_16637                23133 39 +     26546 AGA--ATACT-TC-TAACTAGGA-G-AAAAA-ATAAT--A----AT--T--ATAGT------------
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 I 8
s Dasyprocta_punctata.DasPun_flattened_line_634             64277 33 -    236241 TAA--ATATT-TC-TAGCTAGCA-G-G---A-ATAAT--A----AT--T--AA---------------
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          187368 44 -   6883506 CTA--ATGTT-TC-TGACTAGCA-G-G---A-ATAAC--A----AT--TACA--GTTATATTC----A
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16850834 27 +  31942871 CAA--ATGTT-TT-TACCTAGCA-G-G---A-ATAAT-------------------------------
i Daubentonia_madagascariensis.ctg11                    C 0 I 11
s Delphinapterus_leucas.KZ290064.1                       80043145 42 -  96802777 CAC----GTG-TC-TGACTAGTA-G-G---A-ACAGCT--G----T--T--ACAACTAAGTac----a
i Delphinapterus_leucas.KZ290064.1                      I 1 C 0
s Desmodus_rotundus.KZ672188.1                           18704057 44 -  18957592 TAA--ATGCT-TC-TCACTAGCA-G-G---T-GTAGC-CA-----T--C--ACAGTGATGTGC----A
i Desmodus_rotundus.KZ672188.1                          I 1 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 329043 44 +    993696 CAA--ATATT-TC-TGACTAGCA-G-G---A-ATTGC-CA-----T--T--ATAGTTATGTGC----A
i Dicerorhinus_sumatrensis.PEKH010003161.1              I 1 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   9677 44 +    151128 CAA--ATATT-TC-TGACTAGCA-G-G---A-ATTGC-CA-----T--T--ATAGTTATGTGC----A
i Diceros_bicornis.DicBicMic_scaffold_9545              I 1 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   162212 40 +    228994 TGA--ATGTT-TC-T----GTCA-G-G---A-ATAAC--A----AT--C--ACAGTTACATAC----C
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3661943 43 +   4240102 TGA--ATATT-TC-TACCTAGCA-G-G---A-AC-AT-CA-----T--T--ACAATGGTTTAC----A
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  4297 43 -     11986 TGA--ATATT-TC-TACCTAGCA-G-G---A-AC-AT-CA-----T--T--ACCATGGTTTAC----A
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                42844 41 -     73477 TGA--ATATT-TG-TAACTAGCA-G-G---A-ATA----A-----T--T--ATAATTATAAAC----A
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           23007296 44 -  44670279 TTA--ATGTT-TC-TGACTAGCA-G-A---G-ATAGA-CA-----T--T--ATAGTTATAtgt----a
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 16255 44 +     24177 TAA--ATGTT-TC-CAATTAGCA-A-G---A-TTAGC-CA-----T--T--ATAGTTATATGC----A
i Eidolon_helvum.KE772537.1                             I 1 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1499124 37 +   1727528 -AC--ATGTG-TC-TGACTAGTA-G-A---A-ATAGCT-A-----T--T--A------TTTAC----A
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        245648 44 -    369425 AAA--ATGTT-CT-GAGCTAATA-G-G---A-ATGAT---G---AT--T--GACGCTATAAAC----A
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01076532.1                           1999 44 +      9159 AAA--ATGTT-CT-GAGCTAATA-G-G---A-ATCAT---G---AT--T--GAGGCTATAAAC----A
i Ellobius_talpinus.LOJH01076532.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85879980 44 +  99434291 CAA--ATGCT-TC-TGACTAGCA-G-G---A-AGAGC-CA-----T--T--ATAATTATGTAC----A
i Enhydra_lutris.KZ291749.1                             I 1 C 0
s Eptesicus_fuscus.JH977687.1                             4711844 18 +   6522550 CAA--ATCCT-TC-TGACTAGC----------------------------------------------
i Eptesicus_fuscus.JH977687.1                           I 2 I 16
s Equus_asinus.JREZ01000062.1                             5858903 44 -   7175178 CAA--ATGTT-TC-TGGCTAACA-G-G---A-ATCGC-CA-----T--C--ATACTTATGTAC----C
i Equus_asinus.JREZ01000062.1                           I 1 C 0
s Equus_caballus.CM000402.2                              13357389 44 +  41866177 CAA--ATGTT-TC-TGGCTAACA-G-G---A-ATCGC-CA-----T--C--ATACTTATGTAC----C
i Equus_caballus.CM000402.2                             I 1 C 0
s Equus_przewalskii.ATBW01073585.1                          18879 44 +     92910 CAA--ATGTT-TC-TGGCTAACA-G-G---A-ATCGC-CA-----T--C--ATACTTATGTAC----C
i Equus_przewalskii.ATBW01073585.1                      I 1 C 0
s Erinaceus_europaeus.JH835290.1                         11544365 43 +  16010500 CAA--ATATT-TA-TCACTAGGA-G-G---AAATAGAT-A----A---T----TTAGTTGTAG----A
i Erinaceus_europaeus.JH835290.1                        C 0 I 1
s Erythrocebus_patas.Contig8                             48782549 41 -  48907691 AGA--ATGTT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ACAGTTACATAT----A
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          321404 42 +    330699 CAC----GTG-TC-TGACTAGTA-G-G---A-ACAGC-CA-----T--T--ACAGTTATGTAC----A
i Eschrichtius_robustus.EscRob_flattened_line_685       I 1 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             67856 42 +     89355 CAC----GTG-TC-TGACTAGTA-G-G---A-ACAGC-C-G----T--T--ACAGTTATGTAC----A
i Eubalaena_japonica.EubJap_flattened_line_7756         I 1 C 0
s Eulemur_albifrons.k141_715837                             10954 44 +     13586 CAA--ATGTT-TT-TACCTATCA-G-G---A-ATAAT--A----AT--T--ATAGTTATAGAT----A
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_419870                                 62 44 +      2668 CAA--ATGTT-TT-TACCTATCA-G-G---A-ATAAT--A----AT--T--ATAGTTATAGAT----A
i Eulemur_collaris.k141_419870                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            17350 44 +     36558 CAA--ATGTT-TT-TACCTATCA-G-G---A-ATAAT--A----AT--T--ATAGTTATAGAT----A
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            13672 44 +     60246 CAA--ATGTT-TT-TACCTATCA-G-G---A-ATAAT--A----AT--T--ATAGTTATAGAT----A
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                17157 44 +    109717 CAA--ATGTT-TT-TACCTATCA-G-G---A-ATAAT--A----AT--T--ATAGTTATAGAT----A
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 5140 44 -     19505 CAA--ATGTT-TT-TACCTATCA-G-G---A-ATAAT--A----AT--T--ATAGTTATAGAT----A
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                21815 44 +     27497 CAA--ATGTT-TT-TACCTATCA-G-G---A-ATAAT--A----AT--T--ATAGTTATAGAT----A
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           24271 38 +     26808 CAA--ATGTT-TT-TACCTATCA-G-G---A-ATAAT--A----AT--T--ATA------GAT----A
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                39003 44 +     46535 CAA--ATGTT-TT-TACCTATCA-G-G---A-ATAAT--A----AT--T--ATAGTTATAGAT----A
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              21744 44 -     29447 CAA--ATGTT-TT-TACCTATCA-G-G---A-ATAAT--A----AT--T--ATAGTTATAGAT----A
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129901673 44 - 159252932 CAA--GTGTT-TC-TGACTAGCA-G-C---A-AGAGC-CA-----T--T--ATAGTTATGTAC----A
i Felis_catus.CM001386.2                                I 1 C 0
s Felis_catus_fca126.CM031420.1                         129288650 44 - 158578461 CAA--GTGTT-TC-TGACTAGCA-G-C---A-AGAGC-CA-----T--T--ATAGTTATGTAC----A
i Felis_catus_fca126.CM031420.1                         I 1 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 29840 44 +     52776 CAA--GTGTT-TC-TGACTAGCA-G-C---A-AGAGC-CA-----T--T--ATAGTTATGTAC----A
i Felis_nigripes.FelNig_flattened_line_8080             I 1 C 0
s Fukomys_damarensis.KN123630.1                          13899693 43 -  19261668 TGA--ATGTT-TC-TACCT-GCA-G-G---A-ATTAT--A----AT--T--ATAGTTATATAT----A
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     216998 35 -    847004 AAA--ATGTT-TT-TACCTCGCA-A-G---A-ATAAT-----------T--ACCA------AT----A
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           19360 35 -     43889 AAA--ATGTT-TT-TACCTCGCA-A-G---A-ATAAT-----------T--ACCA------AT----A
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          16501 35 +     27357 AAA--ATGTT-TT-TACCTCGCA-A-G---A-ATAAT-----------T--ACCA------AT----A
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               161267 44 +    324696 CAG--ATGTC-TC-TACCTAGCC-A-G---A-ATAAT--A----AT--T--AAAGTTCTATAT----A
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    188852 37 -    189561 -AC--GCGTG-TC-TGACTAGTA-G-A---A-ATAGCT-A-----T--T--A------TTTAC----A
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           18194 19 -     18683 CTG--ATATT-TC-TACCTAACA---------------------------------------------
i Glis_glis.GliGli_scaffold_79770                       C 0 I 58
s Gorilla_beringei.k141_111300                              10950 41 -     14630 AAA--ATATT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATAT----A
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119658050 41 - 195582420 AAA--ATATT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATAT----A
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Graphiurus_murinus.GraMur_scaffold_4493                   81495 19 +    118900 TGG--CTATT-TC-TACCTATCA---------------------------------------------
i Graphiurus_murinus.GraMur_scaffold_4493               C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         7746 44 +     10286 CAA--ATGTT-TT-TACCTATCA-G-G---A-ATAAT--A----AT--T--ATAGTAATAGAT----A
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             6227 44 -     11661 CAA--ATGTT-TT-TACCTATCA-G-G---A-ATAAT--A----AT--T--ATAGTAATAGAT----A
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                            11551 44 +     56096 CAA--ATGTT-TT-TACCTATCA-G-G---A-ATAAT--A----AT--T--ATAGTAATAGAT----A
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        34800 44 -     42470 CAA--ATGTT-TT-TACCTATCA-G-G---A-ATAAT--A----AT--T--ATAGTAATAGAT----A
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        51426 44 -     54384 CAA--ATGTT-TT-TACCTATCA-G-G---A-ATAAT--A----AT--T--ATAGTAATAGAT----A
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              25148 44 +     53719 CAA--ATGTT-TC-TGACTAGCA-G-G---A-ACAGC-CA-----T--T--ATGGTTATGTAC----A
i Helogale_parvula.HelPar_flattened_line_22962          I 1 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                35943 37 -     91191 -AC--GCATG-TC-TGACTAGTA-G-A---A-ATAGCT-A-----T--T--A------TTTAC----A
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2563860 43 +  31725842 TGA--ATGTT-TC-TAACT-GCA-G-A---A-ATGAT--A----AT--T--ATAGTTATATAT----A
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               65440 44 +     73687 CTA--GTAGT-TC-TAACTATAA-A-G---A-ATAAC-C--C---T--T--AAAGTTATATAC----A
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              153225 44 +    277961 CAC--ATGTG-TC-TGACTAGTA-G-G---A-ATAACT--G----T--T--ATAGTTATGTAC----A
i Hippopotamus_amphibius.HipAmp_scaffold_1308           I 1 C 0
s Hipposideros_armiger.JXIK01001085.1                      287186 43 -    477199 -AA--GTGTT-TC-TGACTAGTA-G-G---A-TTATC-CA-----T--T--ATAGTTATTAAC----A
i Hipposideros_armiger.JXIK01001085.1                   I 1 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959               4460 43 +     26078 -AA--ATGTT-TC-GGACTAGTA-G-G---A-TTATC-CA-----T--T--ATAGTTATTAAC----A
i Hipposideros_galeritus.HipGal_scaffold_52959          I 1 C 0
s Hoolock_leuconedys.ctg315                                   351957 41 +    431944 GAG--ATGTT-TC-TACCTAGCA-G-A---A-GTAAT-----------T--ATAGTTACATAT----A
i Hoolock_leuconedys.ctg315                                I 16 I 82
s Hyaena_hyaena.HyaHya_flattened_line_20729                 25583 43 -     67322 -AA--ATGAT-TC-TGACTAGCA-G-G---A-ACAGC-CA-----T--T--ATGGTTATGTAC----A
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           23500 44 -    119109 TGA--GTATT-TC-TAACTAGCA-A-A---A-ATAGTT-A-----T--T--ATAGTTATAAAC----A
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_1048809                               38 41 -      6555 GAG--ATGTT-TC-TACCTAGCA-G-A---A-GTAAT-----------T--ATAGTTACATAT----A
i Hylobates_abbotti.k141_1048809                        C 0 C 0
s Hylobates_agilis.k141_1136966                              1445 41 +      9785 GAG--ATGTT-TC-TACCTAGCA-G-A---A-GTAAT-----------T--ATAGTTACATAT----A
i Hylobates_agilis.k141_1136966                         C 0 C 0
s Hylobates_klossii.k141_468230                              4925 41 +      5464 GAG--ATGTT-TC-TACCTAGCA-G-A---A-GTAAT-----------T--ATAGTTACATAT----A
i Hylobates_klossii.k141_468230                         C 0 I 172
s Hylobates_pileatus_b.ContigUN                                 14630271 41 -  25970782 GAG--ATGTT-TC-TACCTAGCA-G-A---A-GTAAT-----------T--ATAGTTACATAT----A
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            2822 41 +      4161 GAG--ATGTT-TC-TACCTAGCA-G-A---A-GTAAT-----------T--ATAGTTACATAT----A
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                    11783 44 +     22540 TGA--ATGAT-TC-TAACTAGCA-G-G---A-ATGAT--A----AT--T--ATAATTATATAC----A
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7132049 44 +  13083262 CAA--ATGTT-TC-TACCTAGCa-a-g---a-ataat-------aat-t--atagttATGTTC----A
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   3284 44 +      3484 CAC--ATGTT-TT-TACCTATCA-G-G---A-ATAAT--A----AT--T--ATAGTTATAGAT----A
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              15372 42 +     17520 CAC----GTG-TC-TGACTAGTA-G-G---A-ATAGC-C-G----T--T--ACAATTATGTAC----A
i Inia_geoffrensis.IniGeo_flattened_line_66725          I 1 C 0
s Jaculus_jaculus.JH725511.1                              6852755 44 -  12829143 TAC--ATGTT-TC-TACCTGTCA-A-G---A-ATGAT-CA-----T--T--GCATCTATGAGC----A
i Jaculus_jaculus.JH725511.1                            n 207 I 24
s Kogia_breviceps.KogBre_flattened_line_35920               30001 42 +     37189 CAC----GTG-TC-CGACTAGTA-G-G---A-ACAGC-C-G----T--T--ACAGTTATGTAC----A
i Kogia_breviceps.KogBre_flattened_line_35920           I 1 C 0
s Lagothrix_lagothricha.k141_12968                          55698 41 -    147782 AAA--ATATT-TA-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACCTAC----A
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    9545 18 +     26176 CAA--ATGCT-TC-TGACTAGC----------------------------------------------
i Lasiurus_borealis.LasBor_scaffold_59542               I 2 I 16
s Lemur_catta.scaffold_1                                258413104 44 - 285822530 CAA--ATGTT-TT-TACCTATCA-G-G---A-ATAAT--A----AT--T--ATAGTAATAGAT----A
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        30424 43 +     39228 -AA--ATGTT-TT-TACCTGTCA-G-G---A-ATAAT--A----AT--T--ATAGTTATAGAT----A
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            59789 44 +     63517 CAA--ATGTT-TT-TACCTGTCA-G-G---A-ATAAT--A----AT--T--ATAGTTATAGAT----A
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        38170 44 -     38897 CAA--ATGTT-TT-TACCTATCA-G-G---A-ATAAT--A----AT--T--ATACTTATAGAT----A
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      4215 44 -     13103 CAA--ATGTT-TT-TACCTGTCA-G-G---A-ATAAT--A----AT--T--ATAGTTATAGAT----A
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3094420 45 -   3498232 CAA--ATGTT-TCTTGACTAGCA-G-G---A-ACAGC-CA-----T--T--ATAATTATGTAC----A
i Leptonychotes_weddellii.KB714749.1                    I 1 C 0
s Lepus_americanus.LepAme_scaffold_470947                     459 21 -      1692 ---------------------------------TAAT--A----AT--T--GCAGTT----ATATACA
i Lepus_americanus.LepAme_scaffold_470947               I 19 C 0
s Lipotes_vexillifer.KE558548.1                            142294 42 +   3060487 CAC----GTG-TC-TGACTAGTA-G-G---A-ACAGC-CA-----T--T--ACAATTATGTac----a
i Lipotes_vexillifer.KE558548.1                         I 1 C 0
s Lophocebus_aterrimus.ctg55                             19254169 41 +  19376315 AAA--ATGTT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATAT----A
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           16941 35 +     84689 AAA--ATGTT-TT-TACCTAGCA-G-A---A-ATAAT-----------T--ACAG------AT----A
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3784674 35 +   6799190 AAA--ATGTT-TT-TACCTAGCA-G-A---A-ATAAT-----------T--ACAG------AT----A
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20601005 44 -  62548349 CTA--GTGTT-TT-GGACTAGCA-G-G---A-ATAGC-C--C---T--T--AAGGTTATATAT----A
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11097689 23 +  39895028 ------------------------------A-ACAGC-CA-----T--T--ATAATTACATAC----A
i Lycaon_pictus.CM007556.1                              I 21 C 0
s Macaca_arctoides.k141_2201161                             25918 41 +     74745 AAA--ATGTC-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATCT----A
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12712381 41 +  12821369 AAA--ATGTC-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATCT----A
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                4954 41 -     26467 AAA--ATGTC-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATCT----A
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           52825 41 +     63263 AAA--ATGTC-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATCT----A
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 4935 41 -     26361 AAA--ATGTC-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATCT----A
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_2667654                                1239 41 -      5626 AAA--ATGTC-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATCT----A
i Macaca_leonina.k141_2667654                           C 0 C 0
s Macaca_maura.k141_251854                                  51354 41 -     79256 AAA--ATGTC-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATCT----A
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196041452 41 + 196197964 AAA--ATGTC-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATCT----A
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11451622 41 +  11645122 AAA--ATGTC-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATCT----A
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                  10308 41 -     46448 AAA--ATGTC-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATCT----A
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                7970 41 -     13212 AAA--ATGTC-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATAT----A
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 21651 41 -     55006 AAA--ATGTC-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATCT----A
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43847074 41 +  43892939 AAA--ATGTC-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATCT----A
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               22936 41 -     24607 AAA--ATGTC-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATCT----A
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                              10305 41 -     27140 AAA--ATGTC-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATCT----A
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                704853 44 +    802869 TAA--TTGTT-TT-TGACTAGCA-G-G---A-TTAGA-CA-----T--T--ATAGTTATATAC----A
i Macroglossus_sobrinus.MacSob_scaffold_879             I 1 C 0
s Mandrillus_leucophaeus.scaffold125                     43443338 41 -  43563597 AAA--ATGTT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATAT----A
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4456137 41 -   4543643 AAA--ATGTT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATAT----A
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            154658 44 +    252755 CAA--ACGTT-TC-TGACTAGCA-G-G---A-ATAGC-CA-----T--T--GTAGTAACATAG----A
i Manis_javanica.JSZB01003966.1                         I 1 C 0
s Manis_pentadactyla.KN017078.1                             42257 44 +     58827 CAA--ACGTT-TC-TGACTAGCA-G-G---A-ATAGC-CA-----T--T--GTAGTAACATAG----A
i Manis_pentadactyla.KN017078.1                         I 1 C 0
s Marmota_marmota.CZRN01000005.1                         36879915 44 +  64221397 CAA--ATGTT-TC-TACCTAGCA-G-G---A-ATAAT--A----AT--T--ATAGTTATGTTC----A
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       68633 44 -    234502 TGA--ATGTT-TC-TGATTGGCA-G-C---A-TTCAC-CA-----T--C--ATAGTTATATGC----A
i Megaderma_lyra.MegLyr_scaffold_3562                   I 1 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             9074 44 -     87323 CAA--ATGCT-TC-TGACTAACA-G-G---A-AGAGC-CA-----T--T--ATAATTATGTAC----A
i Mellivora_capensis.MelCap_flattened_line_15433        I 1 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 3882 27 +    115071 AAG--ATGTC-TT-CAGCTAATA-G-T---A-ATCCT-------------------------------
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 I 16
s Mesocricetus_auratus.KB708139.1                         1053519 44 -  26018355 AAA--ATGTT-TT-GAGCTAATA-G-G---A-ATCAT-CA-----T--T--GAAGCTATTTGC----A
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    4963 42 -     12939 CAC----ATG-TC-TGACTAGTA-G-G---A-ACAGC-C-G----T--T--ACAATTATGTAC----A
i Mesoplodon_bidens.MesBid_scaffold_96348               I 1 C 0
s Microcebus_murinus.CM007691.1                          16516144 44 +  47401472 CAA--ATGTT-TT-TACCTATCA-G-G---A-ATAAT--A----AT--G--ATAGTTATAGGT----A
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  47179 44 -     48017 TTA--ATATT-TC-TGATTAGCA-G-A---A-ATAGA-C--C---T--T--ATAGCTATATGT----T
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               27785 44 -     32043 TAA--ATGCT-TC-TCACTAGCA-G-G---T-GTAGCT--G----T--C--ACAGTAGTGCAC----A
i Micronycteris_hirsuta.MicHir_scaffold_37978           I 1 C 0
s Microtus_ochrogaster.CM001673.1                        22826482 44 -  98408828 AAA--ATGTT-CT-GAACTAATA-G-G---A-ATCAT---G---AT--T--GAAGCTATAAAC----A
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         7888 41 +     29742 AGA--ATGTT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATAT----A
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        19822 45 -    104932 CAA--ATGTT-TCTTGACTAGCA-G-G---A-ACAGC-CA-----T--T--ATAATTATGTAC----A
i Mirounga_angustirostris.MirAng_flattened_line_8852    I 1 C 0
s Mirza_zaza.k141_593947                                     6838 44 -     12809 CAA--ATGTT-TT-TACCTATCA-G-G---A-ATAAT--A----AT--G--ATAATTATAGGT----A
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 152738 42 +    154973 CAC----GTG-TC-TGACTAGTA-G-G---A-ACAGCT--G----T--T--ACAACTATGTAC----A
i Monodon_monoceros.MonMon_M_scaffold_5598              I 1 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                166298 45 +    265003 CGA--ATGCT-TC-TGACTAGCAAG-G---T-ATAGC-CA-----T--C--ACAGTTATATAC----A
i Mormoops_blainvillei.MorMeg_scaffold_2952             I 1 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  9520 37 -     19904 -AC--ACATG-TC-TGACTAGTA-G-A---A-ACAGCT-A-----T--T--A------TTTAC----A
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  152874 44 -    168139 CAA--ATGTT-TC-TGACTAGCA-G-G---A-ACAGC-CA-----T--T--ATGGTTATGTAC----A
i Mungos_mungo.MunMun_flattened_line_8729               I 1 C 0
s Mus_caroli.LT608236.1                                  70773764 44 +  92629107 AAA--ATGTT-TT-GAGCTAATT-A-G---A-ATcat-------cat-t--aaaattatatac----a
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75495825 44 +  98207768 AAA--ATGTT-TT-GAGCTAATT-A-G---A-GTCAT-CA-----T--T--AAAATTATATAC----A
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67562558 44 +  89017189 AAA--ATGTT-TT-GAGCTAATT-A-G---A-ATCAT-CA-----T--T--GAAATTATATAC----A
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74338529 44 +  97876770 AAA--ATGTT-TT-GAGCTAATT-A-G---A-GTCat-------cat-t--aaaattatatac----a
i Mus_spretus.CM004110.1                                C 0 C 0
s Mustela_putorius.JH417978.1                             4431168 45 -  28371801 CAA--ATCCT-TC-TGACTAGCA-GGG---A-AGAGC-CA-----T--T--GTAATTATGTAG----A
i Mustela_putorius.JH417978.1                           I 1 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     98246 31 -    117718 TGA--ATGTT-CC-CAACTAGCA-G-A---A-ATAAT-CA-----T--T-------------------
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 I 7
s Myotis_brandtii.KE161952.1                               974171 18 +   8389877 CAA--ATGCT-TC-TGACTAAC----------------------------------------------
i Myotis_brandtii.KE161952.1                            I 2 I 16
s Myotis_davidii.KB114863.1                               5025250 18 +   6462685 CAA--ATGCT-TC-TGACTAAC----------------------------------------------
i Myotis_davidii.KB114863.1                             I 2 I 16
s Myotis_lucifugus.GL429887.1                             3471671 18 -   3747815 CAA--ATGCT-TC-TGACTAAC----------------------------------------------
i Myotis_lucifugus.GL429887.1                           I 2 I 16
s Myotis_myotis.MyoMyo_scaffold_6123                        16906 18 +     66751 CAA--ATGCT-TC-TGACTAAC----------------------------------------------
i Myotis_myotis.MyoMyo_scaffold_6123                    I 2 I 16
s Myrmecophaga_tridactyla.MyrTri_scaffold_12795               793 44 -     87886 CTA--ATGTT-TC-TAAGTAGCA-G-G---T-ATAAC--A----A-C-TGCA--GTTACATAC----A
i Myrmecophaga_tridactyla.MyrTri_scaffold_12795         C 0 C 0
s Nannospalax_galili.KL201303.1                            126232 44 +    362372 TAA--ATGCT-TC-TACCAAGTA-G-G---A-ATCAT-CA-----T--T--GCAGCTATCAGC----A
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                              12149 41 +     48152 AAA--ATGTT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATAT----A
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4493213 45 -  14209539 CAA--ATGTT-TCTTGACTAGCA-G-G---A-ACAGC-CA-----T--T--ATAATTATGTAC----A
i Neomonachus_schauinslandi.NINY01007774.1              I 1 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3957329 42 -   4490290 CAC----GTG-TC-TGACTAGTA-G-G---A-ACAGCT--G----T--T--ACAACTATGTac----a
i Neophocaena_asiaeorientalis.KZ688543.1                I 1 C 0
s Nomascus_annamensis.k141_881190                             256 41 -      2113 GAG--ATGTT-TC-TACCTAGCA-G-A---A-GTAAT-----------T--ATAGTTACATAT----A
i Nomascus_annamensis.k141_881190                       C 0 I 10
s Nomascus_concolor.k141_256540                              8553 41 -      8966 GAG--ATGTT-TC-TACCTAGCA-G-A---A-GTAAT-----------T--ATAGTTACATAT----A
i Nomascus_concolor.k141_256540                         C 0 C 0
s Nomascus_gabriellae.k141_202556                             315 41 -      1580 GAG--ATGTT-TC-TACCTAGCA-G-A---A-GTAAT-----------T--ATAGTTACATAT----A
i Nomascus_gabriellae.k141_202556                       C 0 C 0
s Nomascus_siki_b.tarseq_453                             7806 41 +     12787 GAG--ATGTT-TC-TACCTAGCA-G-A---A-GTAAT-----------T--ATAGTTACATAT----A
i Nomascus_siki_b.tarseq_453                        C 0 C 0
s Nomascus_siki_a.k141_421408                                  2408 41 +     16235 GAG--ATGTT-TC-TACCTAGCA-G-A---A-GTAAT-----------T--ATAGTTACATAT----A
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                40566 23 +   3668941 ------------------------------A-ACAGC-CA-----T--T--ATAATTACGTAC----A
i Nyctereutes_procyonoides.CAJHUB010000786.1            I 21 C 0
s Nycticebus_bengalensis.LG16                            65573731 28 -  95554990 AAA--ATGTT-TT-TACCTAGCA-G-G---A-ATAAT-----------T-------------------
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_6040852                            1367 28 +      1868 AAA--ATGTT-TT-TACCTAGCA-G-G---A-ATAAT-----------T-------------------
i Nycticebus_coucang.k141_6040852                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65681913 28 +  89412551 AAA--ATGTT-TT-TACCTAGCA-G-G---A-ATAAT-----------T-------------------
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            5001766 22 -  23139505 ---------------------------------AAAT--AACTGA-ATT--GCAGTT----AT----A
i Ochotona_princeps.JH802095.1                          I 21 C 0
s Octodon_degus.JH651621.1                                3693390 31 +  10294119 TGA--ATATT-TT-TAACTAgca-g-a---a-ataat-------aat-t-------------------
i Octodon_degus.JH651621.1                              C 0 I 7
s Odobenus_rosmarus.KB229369.1                             687463 45 -   3126709 CAA--ATGTT-TCTTGACTAGCA-G-G---A-ACAGC-CA-----T--T--ATAATTATGTAC----A
i Odobenus_rosmarus.KB229369.1                          I 1 C 0
s Odocoileus_virginianus.KZ101650.1                       1086510 37 +   1425656 -AC--ATGTG-TC-TGACTAGTA-G-A---A-ATAGCT-A-----T--T--A------TTTAC----A
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         44582 38 +     78940 -AT--GCGTG-TC-TGACTAGTA-G-A---A-ATAGCT-A----AT--T--A------TTTAC----A
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  132289 44 +    145789 AAA--ATGTT-CT-GAGATAATA-G-G---A-ATCAT---G---AT--T--GAAGTTCTATAC----A
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  45231 34 +     62360 AAA--ATGTT-TT-GAGCTAATA-G-G---A-ATCAT-CA-C------T--GAA--------------
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7231003 42 -   7562323 CAC----GTA-TC-TGACTAGTA-G-G---A-ACAGCT--G----T--T--ACAACTATGTac----a
i Orcinus_orca.KB316965.1                               I 1 C 0
s Orycteropus_afer.OryAfe_flattened_line_371885              2223 44 +      3658 CAA--ATATC-TC-TGAGTAGCA-G-G---A-ATAAC--A-C---T--T--ATCGTTCTATAT----A
i Orycteropus_afer.OryAfe_flattened_line_371885         C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141885731 21 + 163896628 ---------------------------------TAAT--A----AT--T--GCAGTT----ATACACA
i Oryctolagus_cuniculus.CM000803.1                      I 20 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      317698 23 -    505867 ------------------------------A-ACAGC-CA-----T--T--ATAATTACGTAC----A
i Otocyon_megalotis.JAEUCK010005121.1                   I 21 C 0
s Otolemur_crassicaudatus.k141_505435                        6859 35 -     53940 AAA--ATGTT-TT-TACCTCGCA-A-G---A-ATAAT-----------T--ACCA------AT----A
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18014824 35 -  38779656 AAA--ATGTT-TT-TACCTCGCA-A-G---A-ATAAT-----------T--ACCA------AT----A
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134085725 37 - 275406953 -AC--GCATG-TC-TGACTAGTA-G-A---A-ACAGCT-A-----T--T--A------TTTAC----A
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      86977 37 +    140051 -AC--TCATG-TC-TGACTAGTA-G-A---A-ATAGCT-A-----T--T--A------TTTAC----A
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127580230 41 - 205426864 AAA--ATATT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATAT----A
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120157391 41 - 196562556 AAA--ATATT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATAT----A
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  42440 44 +    295523 CAA--GTGTT-TC-TGACTAGCA-G-C---A-AGAGC-CA-----T--T--ATAGTTATGTAC----A
i Panthera_onca.PanOnc_flattened_line_1615              I 1 C 0
s Panthera_pardus.KV860323.1                              3646254 44 +  18214204 CAA--GTGTT-TC-TGACTAGCA-G-C---A-AGAGC-CA-----T--T--ATAGTTATGTAC----A
i Panthera_pardus.KV860323.1                            I 1 C 0
s Panthera_tigris.KE721879.1                              5035891 44 -   6340057 CAA--GTGTT-TC-TGACTAGCA-G-C---A-AGAGC-CA-----T--T--ATAGTTACGTAC----A
i Panthera_tigris.KE721879.1                            I 1 C 0
s Pantholops_hodgsonii.KE114631.1                         1074616 37 -   1292953 -AC--GCATG-TC-TGACTAGTA-G-A---A-ATAGCT-A-----T--T--A------TTTGC----a
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188162130 41 - 188283584 AAA--ATGTT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATAT----A
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              5220 41 +     25005 AAA--ATGTT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATAT----A
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47519502 41 +  47705337 AAA--ATGTT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATAT----A
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 73495 41 -    104429 AAA--ATGTT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATAT----A
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   12025 41 +     14967 AAA--ATGTT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATAT----A
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_899489                                   695 41 -     13896 AAA--ATGTT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATAT----A
i Papio_ursinus.k141_899489                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    123906 44 -    135482 CAA--ATGTT-TC-TGACTAGCA-G-A---A-ACAGC-CA-----T--T--ATGGTTATGTAC----A
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 I 1 C 0
s Perodicticus_ibeanus.k141_117958                          12514 34 -     23713 AAA--ATG-T-TT-TAACTAACA-G-G---A-ATAAT-----------T--ACAG------AT----A
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           13665 34 +     61070 AAA--ATG-T-TT-TAACTAACA-G-G---A-ATAAT-----------T--ACAG------AT----A
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       3942 44 +     49596 CAA--ATGTT-TC-TACCTAGCA-A-G---A-GTGGT-CA-----T--T--AGAGTTGTTTAC----A
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615458.1                       2841045 34 -   3366660 AAA--ATGTT-TT-GAGCTAATA-G-G---A-AACAT-CA-C------T--GAA--------------
i Peromyscus_maniculatus.KI615458.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    19798 41 -     36578 TGA--ACATT-TC-TAACTATCA-G-G---A-ATTAT--A----AT--T----AGTTG-ATGC----A
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              5463 42 +      8220 CAC----GTG-TC-TGACTAGTA-G-G---A-ACAGCT--G----T--T--ACAACTATGTAC----A
i Phocoena_phocoena.PhoPho_flattened_line_53071         I 1 C 0
s Piliocolobus_badius.k141_1987485                           5683 41 -      5908 AAA--ATGTT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATAT----A
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       6302 41 -     17985 AAA--ATGTT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATAT----A
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            5669 41 +      7694 AAA--ATGTT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATAT----A
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26744152 41 +  26888534 AAA--ATGTT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATAT----A
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306           102392 18 +    112873 CAA--ATGCT-TC-TGACTAAC----------------------------------------------
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        I 2 I 16
s Pithecia_albicans.k141_991845                             45849 41 -     61926 AAA--ATATT-TA-TACCTAGCC-G-A---A-ATAAT-----------T--ATAGTTACCTAC----A
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        27225 41 +     78826 AAA--ATATT-TA-TACCTAGCC-G-A---A-ATAAT-----------T--ATAGTTACCTAC----A
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                             11280 41 -     15800 AAA--ATATT-TA-TACCTAGCC-G-A---A-ATAAT-----------T--ATAGTTACCTAC----A
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        14479 41 -     16101 AAA--ATATT-TA-TACCTAGCC-G-A---A-ATAAT-----------T--ATAGTTACCTAC----A
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          7708 41 +      9673 AAA--ATATT-TA-TACCTAGCC-G-A---A-ATAAT-----------T--ATAGTTACCTAC----A
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13476701 41 -  19735023 AAA--ATATT-TA-TACCTAGCC-G-A---A-ATAAT-----------T--ATAGTTACCTAC----A
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           15611 41 -     31692 AAA--ATATT-TA-TACCTAGCC-G-A---A-ATAAT-----------T--GTAGTTACCTAC----A
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990          11971 42 +     21690 CAC----GTG-TC-TGACTAGTA-G-G---A-ACAGC-C-G----T--T--ACAGTTATGTAC----A
i Platanista_gangetica.PlaMin_flattened_line_72990      I 1 C 0
s Plecturocebus_bernhardi.k141_959214                       27787 41 +     44506 AAA--ATATT-TA-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACCTAC----A
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        28000 41 +     67491 AAA--ATATT-TA-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACCTAC----A
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      18239 41 -     98129 AAA--ATATT-TA-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACCTAC----A
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     27840 41 +    147771 AAA--ATATT-TA-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACCTAC----A
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         4475 41 -     43940 AAA--ATATT-TA-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACCTAC----A
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          8558 41 -     55515 AAA--ATATT-TA-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACCTAC----A
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         27912 41 +    152463 AAA--ATATT-TA-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACCTAC----A
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       5716 41 -    119457 AAA--ATATT-TA-TACCCAGCA-G-A---A-ATAAT-----------T--ATAGTTACCTAC----A
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         17634 41 +    134592 AAA--ATATT-TA-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACCTAC----A
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          28222 41 -     75465 AAA--ATATT-TA-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACCTAC----A
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              192858 41 -    373494 AAA--ATGTT-TC-TACCTAGCA-T-A---A-ATAAT-----------T--ATAGTTACATAT----A
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19813511 41 +  19899266 AAA--ATGTT-TC-TACCTAGCA-T-A---A-ATAAT-----------T--ATAGTTACATAT----A
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               9431 41 -     15069 AAA--ATGTT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGCTACATAT----A
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              9546 41 +     14865 AAA--ATGTT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGCTACATAT----A
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                6547 44 -      9567 CTA--GTATT-TC-TGACTATCA-A-G---A-ATAAC-C--C---T--T--AAAGTTATATAC----A
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6854480 44 +  12164890 CAA--ATGTT-TT-TACCTATCA-g-g---a-ataat-------aat-t--atagtaatagAT----A
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coquerelli.NW_012147997.1                    674054 11 -   2312742 taa--atgtt-tt-t-----------------------------------------------------
i Propithecus_coquerelli.NW_012147997.1                 C 0 I 544
s Propithecus_coronatus.k141_1353159                         9578 44 +     11805 CAA--ATGTT-TT-TACCTATCA-G-G---A-ATAAT--A----AT--T--ATGGTTATAAAT----A
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           48908 44 +     52369 TAA--ATGTT-TT-TACCTATCA-G-G---A-ATAAT--A----AT--T--ATGGTTAAAAAT----A
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         41295 44 -     44753 TAA--ATGTT-TT-TACCTATCA-G-G---A-ATAAT--A----AT--T--ATGGTTAAAAAT----A
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            23218 44 +     27322 TAA--ATGTT-TT-TACCTATCA-G-G---A-ATAAT--A----AT--T--ATGGTTAAAAAT----A
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       22870 44 -     53241 TAA--ATGTT-TT-TACCTATCA-G-G---A-ATAAT--A----AT--T--ATGGTTATAAAT----A
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         45133 44 -     48185 TAA--ATGTT-TT-TATCTATCA-G-G---A-ATAAT--A----AT--T--ATGGTTATAAAT----A
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           40858 16 +     77221 AAG--GTGTT-TC-CAGCTA------------------------------------------------
i Psammomys_obesus.NESX01026517.1                       C 0 I 21
s Pteronotus_parnellii.KE867983.1                            8976 46 -     27784 CAAAAAAGCT-TC-TGACTAGCA-G-G---T-ATAGC-CA-----T--C--ACAGGTATGTAC----A
i Pteronotus_parnellii.KE867983.1                       I 1 I 3
s Pteronura_brasiliensis.PteBra_flattened_line_1343        252820 44 -    344369 CAA--ATGCT-TC-TGACTAGCA-G-G---A-AGAGC-CA-----T--T--ATAATTATGTAC----A
i Pteronura_brasiliensis.PteBra_flattened_line_1343     I 1 C 0
s Pteropus_alecto.KB031157.1                             13250059 44 -  17261082 taa--atgtt-tc-tgACTAGCA-G-G---A-TTAGC-CA-----T--T--ATAGTTATATAC----A
i Pteropus_alecto.KB031157.1                            I 1 C 0
s Pteropus_vampyrus.ABRP02213537.1                            321 44 -      2094 taa--atgtt-tc-tgACTAGCA-G-G---A-TTAGC-CA-----T--T--ATAGTTATATAC----A
i Pteropus_vampyrus.ABRP02213537.1                      I 1 C 0
s Puma_concolor.QAVW01000427.1                          131542581 44 - 161321710 CAA--GTGTT-TC-TGACTAGTA-G-C---A-AGAGC-CA-----T--T--ATAGTTATGTAC----A
i Puma_concolor.QAVW01000427.1                          I 1 C 0
s Pygathrix_cinerea.k141_374971                             33537 41 +     56732 AAA--ATGTT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATAT----A
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6810034 41 +   6970761 AAA--ATGTT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATAT----A
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             9423 41 +     18040 AAA--ATGTT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATAT----A
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                23358 37 +     68503 -AC--ATGTG-TC-TGACTAGTA-G-A---A-ATAGCT-A-----T--T--A------TTTAC----A
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13921246 44 +  90463843 GAA--ATATT-GT-GAGCTAATA-A-G---A-ATCAT-CA-C------T--GGAATCATGCAC----A
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1796162 44 +   2252614 CAA--ATGTT-TC-TGACTAGCA-G-A---A-TTAGC-CA-----T--T--ATAGTTATGTAC----A
i Rhinolophus_sinicus.LVEH01000179.1                    I 1 C 0
s Rhinopithecus_bieti.k119_554384                            3802 41 -     17045 AAA--ATGTT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATAT----A
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206381289 41 - 206558726 AAA--ATGTT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATAT----A
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44860192 41 -  45163003 AAA--ATGTT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATAT----A
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                23265 43 +    109198 TAA--ATGT--TC-TGACTAGCA-G-G---A-GTAGC-CA-----T--T--ATAGTTATATAC----A
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            I 1 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                      4244 35 -      4338 -A----CATG-TC-TGACTAGTA-G-A---A-ATAGCT-A-----T--T--A------TTTAC----A
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15678232 41 -  43202129 aaa--atatt-ta-tacctAGCA-G-A---A-ATAAT-----------T--ATAGTTACCTAC----A
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                       10146 41 +     34089 AAA--ATATT-TA-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACCTAC----A
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                             10085 41 -     60842 AAA--ATATT-TA-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACCTAC----A
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                             10179 41 +     67014 AAA--ATATT-TA-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACCTAC----A
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                             10156 41 +     60816 AAA--ATATT-TA-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACCTAC----A
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                10093 41 -     76454 AAA--ATATT-TA-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACCTAC----A
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17346865 41 -  30362882 AAA--ATATT-TG-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACCTAC----A
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         26186 41 -     62485 AAA--ATATT-TG-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACCTAC----A
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   42097 44 -    114521 CAG--ACGTT-TC-TGACTAGCA-G-G---A-ATAGC-CA----A---T--ATAGCTATCCAC----A
i Scalopus_aquaticus.ScaAqu_scaffold_9300               I 1 C 0
s Semnopithecus_entellus.k141_1572367                        7038 41 +     15331 AAA--ATGTT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATAT----A
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      12413 41 +     20762 AAA--ATGTT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATAT----A
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         122419 41 +    130994 AAA--ATGTT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATAT----A
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           41197 41 +     46263 AAA--ATGTT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATAT----A
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     34342 41 +     42640 AAA--ATGTT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATAT----A
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        17364 41 +     30600 AAA--ATGTT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATAT----A
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  107443 44 -    120886 AAA--ATGTT-TT-GTGATAATA-G-A---A-GTCCT-CA----A---T--GAAGAAATATAC----A
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            26746 44 +    739146 CTA--ATGTT-TC-TGACTAGCA-G-G---A-ATAGCT-AG-------T--ACCAAATTGTAT----A
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17777077 20 -  27805282 CAA--ATGTT-TA-TAACTAGTA-G-------------------------------------------
i Sorex_araneus.JH798170.1                              I 1 I 20
s Spermophilus_dauricus.KZ294190.1                        2245750 44 +   2842873 CAA--ATGTT-TC-TACCTAGCa-a-g---a-ataat-------aat-t--atagttATGTTC----A
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             241584 44 -    276980 CAA--ATGCT-TC-TGATTAGCA-G-G---A-AGAGC-CA-----T--T--ATAATAATGTAT----A
i Spilogale_gracilis.SpiGra_flattened_line_905          I 1 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            35778 44 +     62062 CAA--ATGTT-TC-TGACTAGCA-G-G---A-ACAGC-CA-----T--T--ATGGTTATGTAC----A
i Suricata_suricatta.SurSur_flattened_line_20339        I 1 C 0
s Sus_scrofa.CM000824.4                                 189278001 44 + 218635234 CAA--ATGTT-TC-TGACTAGTA-T-G---G-AGAAT---G--G-T--T--AAAGTTATGTAC----a
i Sus_scrofa.CM000824.4                                 I 1 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                5238 44 +     20549 CAA--ATAGT-TC-TGACTAGCA-G-G---T-ATAAC-CA-----T--T--ATAATTATTTAC----A
i Tadarida_brasiliensis.TadBra_scaffold_61492           I 1 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               19027 44 +     45698 CTA--ATGTT-TC-TGAGTAGCA-G-G---T-ATAAC--A----AT--TGCA--GTTACATAC----A
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      813376 42 +   1148477 CAA--ATGTT-CC-TGACTAGCA-G-G---A-AT--C-CA-----T--T--ATAGATATGTAC----A
i Tapirus_indicus.TapInd_scaffold_176                   I 1 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  64012 42 +     99546 CAA--ATGTT-CC-TGACTAGCA-G-G---A-AT--C-CA-----T--T--ATAGATATGTAC----A
i Tapirus_terrestris.TapTer_scaffold_14939              I 1 C 0
s Tarsius_lariang.k141_609102                               32876 36 +     42269 taa--tcatc-tc-agat--gca-g-a---a-a--ac-----------t--a-agaaccatat----g
i Tarsius_lariang.k141_609102                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194013663 41 - 194193292 AAA--ATGTT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ACAGTTACATAT----A
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             40895 42 -     47444 TGA--ATGTT-TC-TAACTAGCA-G-G---G-ACTAT--A----AT--C----AGTTATATGC----A
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                  2157 42 -      3104 CTA--ACATT-TC-TGACTCGCA-G-G---A-GTAAC--A----AT--T--A--GTTATATAC----A
i Tolypeutes_matacus.TolMat_scaffold_475685             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  140960 44 -    259118 TAA--ATACT-TC-TCACTAGCA-G-C---T-GTAGC-CA-----T--C--ACAGTAGTGTAC----A
i Tonatia_saurophila.TonSau_scaffold_3334               I 1 C 0
s Trachypithecus_auratus.k141_738098                        30685 41 +     38948 AAA--ATGTT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATAT----A
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   24245 41 -     32910 AAA--ATGTT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATAT----A
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      6146 41 -     12939 AAA--ATGTT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATAT----A
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       5574 41 -     14244 AAA--ATGTT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATAT----A
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           46967 41 -     54611 AAA--ATGTT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATAT----A
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        4768 41 -     11566 AAA--ATGTT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATAT----A
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     6952 41 -     15592 AAA--ATGTT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATAT----A
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          5604 41 +     14371 AAA--ATGTT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATAT----A
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   3890 41 +     12481 AAA--ATGTT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATAT----A
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        3871 41 -     24393 AAA--ATGTT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATAT----A
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       9015 41 -     28054 AAA--ATGTT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATAT----A
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44663799 41 -  44834318 AAA--ATGTT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATAT----A
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       6111 41 +     13828 AAA--ATGTT-TC-TACCTAGCA-G-A---A-ATAAT-----------T--ATAGTTACATAT----A
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                  11844 50 +     90398 CAC--ATGTG-TC-TGACTACAC-A-C---A-ATTACTCAGC-GATA-A--ACAATTACATAC----A
i Tragulus_javanicus.TraJav_scaffold_14717              I 1 C 0
s Trichechus_manatus.JH594618.1                          16092084 44 +  31416278 CTA--GTGTT-TC-TGACTGGCC-G-A---A-ATCAC-C--C---T--T--AAGGTTATATAC----A
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2802792 44 -   3938065 CAA--ATGTT-TC-TCCTTTGGA-G-G---A-ATAAC--A----A-C-T--TCAATTACGCAT----C
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                   11616 44 +     13056 CAA--ATGTT-TC-TCCTTCGGA-G-G---A-ATAAC--A----A-C-T--TCAATTTCGCAT----A
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69319733 42 -  96451834 CAC----GTG-TC-TGACTAGTA-G-G---A-ACAGCT--G----T--T--ACAACTATGTac----a
i Tursiops_truncatus.MRVK01000923.1                     I 1 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                    2439 40 +    136657 CAA--ATATT-TC-TAACTAGCA-G-G---A-ATAGCT-------TG-T--ATAGTTA----C----A
i Uropsilus_gracilis.UroGra_scaffold_4115               I 1 C 0
s Ursus_maritimus.KK498671.1                              6523228 44 +  28682327 CAA--ATGTT-TC-TGACTAGCA-G-G---A-ACAGC-------cat-t--ataattatgtat----a
i Ursus_maritimus.KK498671.1                            I 1 C 0
s Varecia_rubra.k141_432109                                 11145 44 -     20643 CAA--ATGTT-TT-TACCTATCA-G-G---A-ATAAT--A----AT--T--ATAGTTATAGAT----A
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             30680 44 -     33872 CAA--ATGTT-TT-TACCTATCA-G-G---A-ATAAT--A----AT--T--ATAGTTATAGAT----A
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1530763 44 -   2331223 CAA--GTGTT-TC-TGACTAGTA-A-G---A-ATATCT-A-----T--T--ACAGTCATGTAC----A
i Vicugna_pacos.KN269600.1                              I 1 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                146924 23 -    281493 ------------------------------A-ACAGC-CA-----T--T--ATAATTACATAC----A
i Vulpes_lagopus.VulLag_flattened_line_2045             I 21 C 0
s Xerus_inauris.XerIna_scaffold_7898                       133245 44 -    134049 TGA--ATGTT-TC-TACCTAGCA-G-G---A-ATGAT--A----AT--T--ATAATTATGTTC----A
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        222324 45 -    227762 CAA--ATGTT-TCTTGACTAGCA-G-G---A-ACAGC-CA-----T--T--ATAATTATGTAC----A
i Zalophus_californianus.ZalCal_flattened_line_4097     I 1 C 0
s Zapus_hudsonius.ZapHud_scaffold_202118                     2845 44 -      3360 TGA--ATGTC-TC-TATCTAGCA-A-A---A-ATGAT-C-G----T--T--ACAGCTACGAAC----A
i Zapus_hudsonius.ZapHud_scaffold_202118                C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            4326 42 -     13665 CAC----GTG-TC-TGACTAGTA-G-G---A-ACAGC-CA-----T--T--ACAATTATGTAT----A
i Ziphius_cavirostris.ZipCav_flattened_line_60625       I 1 C 0
e Noctilio_leporinus.NocLep_scaffold_12062                  53142 337 +     94413 I
e Murina_feae.MurFea_scaffold_2254                          26669 255 -    100666 I
e Miniopterus_schreibersii.MinSch_scaffold_24116            40144 474 +     45743 I
e Miniopterus_natalensis.LDJU01000022.1                   8215685 474 +  10048721 I
e Elephantulus_edwardii.JH947210.1                        7837010 301 +  15467074 I
e Hylobates_pileatus_a.tarseq_592                             37267 2881 -     60944 I
e Muscardinus_avellanarius.MusAve_scaffold_9643             17160  2 +     98495 I
e Symphalangus_syndactylus.tarseq_24                        20205  0 -  13920577 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               19285 10 +    209709 GT-T----G-TCT------------A-GG
s Acinonyx_jubatus.LLWD01000356.1                         2042142 10 +   3721120 AT-T----A-TCC------------A-GA
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    119800 10 -    189883 GC-T----A-CCT------------G-GG
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10666005 10 +  23371972 at-t----a-cCC------------A-GG
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7102958 10 -  16596857 at-t----a-cCC------------A-GG
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_67806                    7006 10 +     22864 AT-T----G-CCT------------A-GG
i Allactaga_bullata.AllBul_scaffold_67806               C 0 I 14
s Allenopithecus_nigroviridis.k141_2469532                   7182 10 -     60446 AT-T----G-TCT------------A-GG
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         7896 10 -     29318 AT-T----G-TCT------------A-GG
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         6834 10 +     38766 AT-T----G-TCT------------A-GG
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          7792 10 -     80423 AT-T----G-TCT------------A-GG
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              2734 10 +     19852 AT-T----G-TAT------------A-GG
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                4950 10 -     12443 AT-T----G-TAT------------A-GG
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                             2277 10 +      5070 AT-T----G-TAT------------A-GG
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_1458234                                  48 10 +     11617 AT-T----G-TAT------------A-GG
i Alouatta_juara.k141_1458234                           C 0 C 0
s Alouatta_macconnelli.k141_2318944                          4759 10 -     24210 AT-T----G-TAT------------A-GG
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_494922                             1263 10 -      8325 AT-T----G-TAT------------A-GG
i Alouatta_nigerrima.k141_494922                        C 0 C 0
s Alouatta_palliata.k141_405616                              7158 10 +     16794 AT-T----G-TAT------------A-GG
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_347198                             1210 10 +      9111 AT-T----G-TAT------------A-GG
i Alouatta_puruensis.k141_347198                        C 0 C 0
s Alouatta_seniculus.k141_790278                             6458 10 -      9835 AT-T----G-TAT------------A-GG
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3529166 10 +   4113121 AG-T----A-TTC------------A-GA
i Ammotragus_lervia.NIVO01013474.1                      C 0 I 4
s Anoura_caudifer.AnoCau_scaffold_422                      395823 10 -    631301 AT-T----A-TCT------------C-GG
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             6578 10 +     55446 AG-T----A-TTC------------A-AA
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 I 4
s Aotus_azarae.k141_3170768                                 68066 10 +     78111 AT-T----G-TAT------------A-GG
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                           11007 10 +     22701 AT-T----G-TAT------------A-GG
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5754976 10 +   9889416 AT-T----G-TAT------------A-GG
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                            11555 10 -    104377 AT-T----G-TAT------------A-GG
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                              11584 10 +     23246 AT-T----G-TAT------------A-GG
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     4207 10 +     11424 AT-T----A-TCT------------T-GG
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        8159 10 +      9265 AT-T----A-TGC------------G-GG
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                13905 10 -     29036 AT-T----A-TCC------------A-GG
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9544868 10 +  39197703 AT-T----G-TAT------------A-GG
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             66142 10 +     85812 AT-T----G-TAT------------A-GG
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                17152 10 +     89302 AT-T----G-TAT------------A-GG
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             21656 10 -     58268 AT-T----G-TAT------------A-GG
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             69650 10 +    119057 AT-T----G-TAT------------A-GG
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              11619 10 -     25888 AT-T----G-TAT------------A-GG
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                12716 10 -     16375 AT-T----A-TGC------------A-GG
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_1363236                                 8 10 +     13465 AT-T----A-TGC------------A-GG
i Avahi_peyrierasi.k141_1363236                         N 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26386601 10 +  51448160 at-t----a-ttc------------a-aa
i Balaenoptera_acutorostrata.KI537095.1                 C 0 I 4
s Balaenoptera_bonaerensis.DF502048.1                       11775 10 -     13118 at-t----a-ttc------------a-aa
i Balaenoptera_bonaerensis.DF502048.1                   C 0 I 4
s Beatragus_hunteri.BeaHun_scaffold_21644                   51364 10 -     72089 AG-T----A-TTC------------A-GA
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 I 4
s Bison_bison.KN264915.1                                   306091 10 -   6870073 AG-T----A-TTC------------A-GA
i Bison_bison.KN264915.1                                C 0 I 4
s Bos_indicus.CM003021.1                                 22960197 10 + 161108492 AG-T----A-TTC------------A-GA
i Bos_indicus.CM003021.1                                C 0 I 4
s Bos_mutus.JH883513.1                                     422376 10 +    998990 AG-T----A-TTC------------A-GA
i Bos_mutus.JH883513.1                                  C 0 I 4
s Bos_taurus.CM000177.6                                  22668849 10 + 158972876 AG-T----A-TTC------------A-GA
i Bos_taurus.CM000177.6                                 C 0 I 4
s Bubalus_bubalis.KI419065.1                               677699 10 +   1914593 AG-T----A-TTC------------A-GA
i Bubalus_bubalis.KI419065.1                            C 0 I 4
s Cacajao_ayresi.k141_724503                               119482 10 -    171031 AT-T----G-TAT------------A-GG
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 18502 10 +    125063 AT-T----G-TAT------------A-GG
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                20549 10 -    216513 AT-T----G-TAT------------A-GG
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       13092 10 -    134917 AT-T----G-TAT------------A-GG
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3225699 10 -   8989139 GT-C----a-ctc------------a-ta
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           403399 10 -  15254737 GT-C----A-ctc------------a-ta
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2979137 10 +   6889770 GT-C----A-ctc------------a-ta
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11528861 10 +  39901454 AT-T----A-CCT------------G-GG
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   23835 10 +     87036 AT-T----A-CCT------------G-GG
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11275758 10 -  35597290 AT-T----A-CCT------------G-GG
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11098256 10 +  39895921 AT-T----A-CCT------------G-GG
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16465040 10 -  44759192 AT-T----A-CCT------------G-GG
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21336600 10 + 157394656 AG-T----A-TTC------------A-GA
i Capra_aegagrus.CM003214.1                             C 0 I 4
s Capra_hircus.CM004562.1                               135714953 10 - 157403528 AG-T----A-TTC------------A-GA
i Capra_hircus.CM004562.1                               C 0 I 4
s Carlito_syrichta.NW_007248099.1                          315052 22 +    345090 at-t----a-tctcagatacaaaaaa-ag
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               64880 10 +     67245 AT-T----A-TCC------------A-GG
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_1326                     1709 11 -    202837 AT-T----A-TCT------------AAGG
i Castor_canadensis.CasCan_scaffold_1326                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   165665 10 -    276539 GT-T----A-TTT------------G-GA
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 I 4
s Cavia_aperea.AVPZ01000278.1                            15791943 10 -  24422027 AT-T----A-TCC------------A-AG
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15803888 10 -  24440124 AT-T----A-TCC------------A-AG
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       182060 10 +    436027 AT-T----A-TCC------------A-AG
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18897218 10 -  29618158 AT-T----G-TAT------------A-GG
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                13868 10 -     26817 AT-T----G-TAT------------A-GG
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                18111 10 +     25043 AT-T----G-TAT------------A-GG
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                        14089 22 +     21754 at-t----a-tctcagatacaaaaaa-gg
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4370688 11 +   7569818 ATTT----A-TCC------------A-Ag
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_171732          845 11 +      8380 ATTT----A-TCC------------A-AG
i Ceratotherium_simum_cottoni.CerCot_scaffold_171732    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6561121 10 +   6739814 AT-T----G-TCT------------A-GG
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      32598 10 +     60454 AT-T----G-TCT------------A-GG
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          7802 10 -     21101 AT-T----G-TCT------------A-GG
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         65112 10 -    107033 AT-T----G-TCT------------A-GG
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        7973 10 -     17608 AT-T----G-TCT------------A-GG
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          5141 10 +     45019 AT-T----G-TCT------------A-GG
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           5409 10 +     15177 AT-T----G-TCT------------A-GG
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          8023 10 +     16677 AT-T----G-TCT------------A-GG
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           30211 10 +     35983 AT-T----G-TCT------------A-GG
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11996744 10 +  12117833 AT-T----G-TCT------------A-GG
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46483726 10 +  46592721 AT-T----G-TCT------------A-GG
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                       1829 10 -     27215 AT-T----G-TCT------------A-GG
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       8037 10 +     35577 AT-T----G-TCT------------A-GG
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        7831 10 -     25661 AT-T----G-TCT------------A-GG
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        7995 10 -     17744 AT-T----G-TCT------------A-GG
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        27364 10 +     37128 AT-T----G-TCT------------A-GG
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           6349 10 -      6963 AT-T----A-TCC------------A-AG
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           64932 10 -     68416 AT-T----A-TGC------------A-AG
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_854352                            1233 10 +     27737 AT-T----A-TGC------------A-GG
i Cheirogaleus_medius.k141_854352                       C 0 C 0
s Cheracebus_lucifer.k141_619653                            11176 10 -     18223 AT-T----G-TAT------------A-TG
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              2917 10 +    188999 AT-T----G-TAT------------A-TG
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           47216 10 +     57117 AT-T----G-TAT------------A-TG
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          51896 10 +     54541 AT-T----G-TAT------------A-TG
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15966644 10 +  43084221 GT-T----A-TCT------------C-AG
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         76697 10 +    196370 AT-T----G-TAT------------A-GG
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          20878 10 +     40510 AT-T----G-TAT------------A-GG
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15145557 10 -  15256731 AT-T----G-TCT------------A-GG
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      40021 10 -     53260 AT-T----G-TCT------------A-GG
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101150580 10 + 101219884 AT-T----G-TCT------------A-GG
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_304221              6174 10 -      7053 AT-T----A-CAC------------A-TG
i Chrysochloris_asiatica.ChrAsi_scaffold_304221         I 2814 C 0
s Colobus_angolensis.KN985967.1                          10890350 10 +  10971483 AT-T----G-TCT------------A-GG
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147668278 10 + 156195979 AT-T----G-TCT------------A-GG
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            20261 10 +     23629 AT-T----G-TCT------------A-GG
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60624674 10 +  78930452 TT-A----A-TCT------------G-GG
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         5557 10 -      5782 AT-T----A-TCT------------A-GG
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 284704 10 -    399297 GT-A----A-CCC------------A-AG
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53036990 10 +  72327488 AT-G----A-CCC------------A-GG
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              4540 15 -     22648 ATGCAGCTA-TAT------------A-AG
i Crocidura_indochinensis.CroInd_scaffold_27484         I 1 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            60074 10 -     70449 AT-T----A-TCC------------A-GA
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  216839 10 -    956709 AT-A----A-CCT------------A-GG
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 38355 10 -     67205 at-c----a-tct------------a-gg
i Ctenomys_sociabilis.CteSoc_scaffold_19489             I 7 I 97
s Cuniculus_paca.CunPac_flattened_line_16637                23180 10 +     26546 AT-T----A-CCT------------A-GG
i Cuniculus_paca.CunPac_flattened_line_16637            I 8 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             64310  7 -    236241 --------T-TCT------------A-GG
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          187412 10 -   6883506 AT-T----A-TCc------------a-ag
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16850872 10 +  31942871 AT-T----A-TGC------------A-GG
i Daubentonia_madagascariensis.ctg11                    I 11 C 0
s Delphinapterus_leucas.KZ290064.1                       80043187 10 -  96802777 at-t----a-ttc------------a-aa
i Delphinapterus_leucas.KZ290064.1                      C 0 I 4
s Desmodus_rotundus.KZ672188.1                           18704101 10 -  18957592 AT-T----A-TCC------------A-CA
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 329087 11 +    993696 ATTT----A-TCC------------A-GG
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   9721 11 +    151128 ATTT----A-TCC------------A-GG
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   162252 10 +    228994 AT-T----A-TCT------------A-GA
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dipodomys_ordii.KN672545.1                              3661986  8 +   4240102 AA-T----G-TGT------------G---
i Dipodomys_ordii.KN672545.1                            C 0 C 0
s Dipodomys_stephensi.DipSte_scaffold_84338                  4340  8 -     11986 AA-T----G-TGT------------G---
i Dipodomys_stephensi.DipSte_scaffold_84338             C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                42885 10 -     73477 AT-T----A-TCT------------A-AG
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           23007340 10 -  44670279 at-t----a-tta------------a-aa
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 16299 10 +     24177 AT-T----A-TCC------------A-AG
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1499161 10 +   1727528 AG-T----A-TTC------------A-TA
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 I 4
s Ellobius_lutescens.LOEQ01003611.1                        245692 10 -    369425 GT-T----A-CCC------------C-GT
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01076532.1                           2043 10 +      9159 GT-T----A-CCC------------A-GT
i Ellobius_talpinus.LOJH01076532.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85880024 10 +  99434291 AT-T----A-CCC------------A-GG
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4711878 10 +   6522550 AT-T----C-TCC------------A-GG
i Eptesicus_fuscus.JH977687.1                           I 16 C 0
s Equus_asinus.JREZ01000062.1                             5858947 11 -   7175178 ATTT----A-TCC------------A-GG
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13357433 11 +  41866177 ATTT----A-TCC------------A-GG
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          18923 11 +     92910 ATTT----A-TCC------------A-GG
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11544409 10 +  16010500 AT-T----A-TCT------------A-GG
i Erinaceus_europaeus.JH835290.1                        I 1 C 0
s Erythrocebus_patas.Contig8                             48782590 10 -  48907691 AT-T----G-TCT------------A-GG
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          321446 10 +    330699 AT-T----A-TTC------------A-AA
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 I 4
s Eubalaena_japonica.EubJap_flattened_line_7756             67898 10 +     89355 AT-T----A-TTC------------A-AA
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 I 4
s Eulemur_albifrons.k141_715837                             10998 10 +     13586 AT-T----A-TGC------------A-GG
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_419870                                106 10 +      2668 AT-T----A-TGC------------A-GG
i Eulemur_collaris.k141_419870                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            17394 10 +     36558 AT-T----A-TGC------------A-GG
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            13716 10 +     60246 AT-T----A-TGC------------A-GG
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                17201 10 +    109717 AT-T----A-TGC------------A-GG
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 5184 10 -     19505 AT-T----A-TGC------------A-GG
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                21859 10 +     27497 AT-T----A-TGC------------A-GG
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           24309 10 +     26808 AT-T----A-TGC------------A-GG
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                39047 10 +     46535 AT-T----A-TGC------------A-GG
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              21788 10 -     29447 AT-T----A-TGC------------A-GG
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129901717 10 - 159252932 AT-T----A-TCC------------A-GA
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129288694 10 - 158578461 AT-T----A-TCC------------A-GA
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 29884 10 +     52776 AT-T----A-TCC------------A-GA
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13899736 10 -  19261668 GT-C----A-TCT------------A-GG
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     217033 10 -    847004 AT-T----A-TGC------------A-GG
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           19395 10 -     43889 AT-T----A-TGC------------A-GG
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          16536 10 +     27357 AT-T----A-TGC------------A-GG
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               161311 10 +    324696 AT-T----A-TCC------------A-GG
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    188889 10 -    189561 AG-t----a-ttc------------a-ga
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 I 4
s Gorilla_beringei.k141_111300                              10991 10 -     14630 AT-T----G-TCT------------A-GG
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119658091 10 - 195582420 AT-T----G-TCT------------A-GG
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         7790 10 +     10286 AT-T----A-TGC------------A-GG
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             6271 10 -     11661 AT-T----A-TGC------------G-GG
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                            11595 10 +     56096 AT-T----A-TGC------------A-GG
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        34844 10 -     42470 AT-T----A-TGC------------A-GG
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        51470 10 -     54384 AT-T----A-TGC------------A-GG
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              25192 10 +     53719 AT-A----A-TCC------------A-GT
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                35980 10 -     91191 AA-T----A-TTC------------A-GA
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 I 4
s Heterocephalus_glaber.JH602058.1                        2563903 10 +  31725842 GT-C----A-GCT------------A-GG
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               65484 10 +     73687 AC-T----A-CTC------------A-GA
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              153269 10 +    277961 AT-T----A-TTC------------A-GA
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 I 4
s Hipposideros_armiger.JXIK01001085.1                      287229 10 -    477199 AT-T----A-TTC------------A-GA
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959               4503 10 +     26078 AT-T----A-TCG------------A-GG
i Hipposideros_galeritus.HipGal_scaffold_52959          C 0 C 0
s Hoolock_leuconedys.ctg79                                     10910 10 -   7690867 GC-T----G-TCT------------A-GG
i Hoolock_leuconedys.ctg79                                 I 41 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 25626 10 -     67322 AT-T----A-TCC------------A-GA
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           23544 10 -    119109 AT-T----A-TCT------------A-AG
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_1048809                               79 10 -      6555 GC-T----G-TCT------------A-GG
i Hylobates_abbotti.k141_1048809                        C 0 C 0
s Hylobates_agilis.k141_1136966                              1486 10 +      9785 GC-T----G-TCT------------A-GG
i Hylobates_agilis.k141_1136966                         C 0 C 0
s Hylobates_klossii.k141_1069878                               26 10 +      2316 GC-T----G-TCT------------A-GG
i Hylobates_klossii.k141_1069878                        n 172 C 0
s Hylobates_pileatus_b.ContigUN                                 14630312 10 -  25970782 GC-T----G-TCT------------A-GG
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            2863 10 +      4161 GC-T----G-TCT------------A-GG
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                    11827 10 +     22540 AT-A----T-TAT------------A-AG
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7132093 10 +  13083262 AT-T----A-TCT------------T-GG
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   3328 10 +      3484 AT-T----A-TAC------------A-GG
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              15414 10 +     17520 AT-T----A-TTC------------A-AA
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 I 4
s Jaculus_jaculus.JH725517.1                              8581081 10 +  11848649 AT-T----G-CCT------------A-GG
i Jaculus_jaculus.JH725517.1                            I 207 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               30043 10 +     37189 AT-T----A-TTC------------A-AA
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 I 4
s Lagothrix_lagothricha.k141_12968                          55739 10 -    147782 AT-T----G-TAT------------A-GG
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    9579 10 +     26176 CT-T----C-TCC------------A-GG
i Lasiurus_borealis.LasBor_scaffold_59542               I 16 C 0
s Lemur_catta.scaffold_1                                258413148 10 - 285822530 AT-T----A-TGT------------G-GG
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        30467 10 +     39228 AT-T----A-TGT------------G-GG
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            59833 10 +     63517 AT-T----A-TGT------------G-GG
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        38214 10 -     38897 AT-T----A-TGC------------G-GG
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      4259 10 -     13103 AT-T----A-TGT------------G-GG
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3094465 10 -   3498232 AT-T----A-CCC------------A-GG
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_470947                     480 10 -      1692 AC-T----A-TTC------------A-GG
i Lepus_americanus.LepAme_scaffold_470947               C 0 C 0
s Lipotes_vexillifer.KE558548.1                            142336 10 +   3060487 at-t----a-ttc------------a-aa
i Lipotes_vexillifer.KE558548.1                         C 0 I 4
s Lophocebus_aterrimus.ctg55                             19254210 10 +  19376315 AT-T----G-TCT------------A-GG
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           16976 10 +     84689 AT-T----A-TTC------------C-AG
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3784709 10 +   6799190 AT-T----A-TTC------------C-AG
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20601049 10 -  62548349 AT-T----A-CTC------------A-GG
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11097712 10 +  39895028 AT-T----A-CCT------------G-GG
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             25959 10 +     74745 AT-T----G-TCT------------A-GG
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12712422 10 +  12821369 AT-T----G-TCT------------A-GG
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                4995 10 -     26467 AT-T----G-TCT------------A-GG
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           52866 10 +     63263 AT-T----G-TCT------------A-GG
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 4976 10 -     26361 AT-T----G-TCT------------A-GG
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_2667654                                1280 10 -      5626 AT-T----G-TCT------------A-GG
i Macaca_leonina.k141_2667654                           C 0 C 0
s Macaca_maura.k141_251854                                  51395 10 -     79256 AT-T----G-TCT------------A-GG
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196041493 10 + 196197964 AT-T----G-TCT------------A-GG
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11451663 10 +  11645122 AT-T----G-TCT------------A-GG
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                  10349 10 -     46448 AT-T----G-TCT------------A-GG
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                8011 10 -     13212 AT-T----G-TCT------------A-GG
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 21692 10 -     55006 AT-T----G-TCT------------A-GG
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43847115 10 +  43892939 AT-T----G-TCT------------A-GG
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               22977 10 -     24607 AT-T----G-TCT------------A-GG
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                              10346 10 -     27140 AT-T----G-TCT------------A-GG
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                704897 10 +    802869 AT-T----A-TCC------------A-GG
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43443379 10 -  43563597 AT-T----G-TCT------------A-GG
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4456178 10 -   4543643 AT-T----G-TCT------------A-GG
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            154702 10 +    252755 GT-T----A-TTG------------A-GG
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             42301 10 +     58827 GT-T----A-TTG------------A-GG
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36879959 10 +  64221397 AT-T----A-TCT------------T-GG
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       68677 10 -    234502 AC-T----G-TCC------------A-GG
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             9118 10 -     87323 AT-T----A-CCC------------A-GG
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 3925 10 +    115071 GT-T----A-TCC------------A-GC
i Meriones_unguiculatus.MerUng_scaffold_9483            I 16 C 0
s Mesocricetus_auratus.KB708139.1                         1053563 10 -  26018355 GT-G----A-CCC------------A-GG
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    5005 10 -     12939 AT-T----A-TTC------------A-AA
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 I 4
s Microcebus_murinus.CM007691.1                          16516188 10 +  47401472 AT-T----A-TGC------------A-GG
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  47223 10 -     48017 AT-T----A-TTG------------A-GA
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               27829 10 -     32043 AT-T----A-TCC------------A-GG
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22826526 10 -  98408828 GT-T----A-CCC------------A-TT
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         7929 10 +     29742 AT-T----G-TCT------------A-GG
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        19867 10 -    104932 AT-T----A-CCC------------A-GG
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     6882 10 -     12809 AT-T----A-TGC------------A-GG
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 152780 10 +    154973 AT-T----A-TTC------------A-AA
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 I 4
s Mormoops_blainvillei.MorMeg_scaffold_2952                166343 10 +    265003 AT-T----A-TCC------------A-GG
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  9557 10 -     19904 AG-T----A-TTC------------A-GA
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 I 4
s Mungos_mungo.MunMun_flattened_line_8729                  152918 10 -    168139 AT-A----A-TCC------------A-GA
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Mus_caroli.LT608236.1                                  70773808 10 +  92629107 at-t----a-GTC------------A-GG
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75495869 10 +  98207768 AT-T----A-CTC------------A-GG
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67562602 10 +  89017189 AT-T----A-CTC------------A-GG
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74338573 10 +  97876770 at-t----a-cTC------------A-GG
i Mus_spretus.CM004110.1                                C 0 C 0
s Mustela_putorius.JH417978.1                             4431213 10 -  28371801 AT-T----A-CCC------------A-GG
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     98284 10 -    117718 AT-T----T-TCC------------A-GG
i Myocastor_coypus.MyoCoy_scaffold_3653                 I 7 C 0
s Myotis_brandtii.KE161952.1                               974205 10 +   8389877 AT-T----T-TTC------------A-GG
i Myotis_brandtii.KE161952.1                            I 16 C 0
s Myotis_davidii.KB114863.1                               5025284 10 +   6462685 AT-T----C-TCC------------A-GG
i Myotis_davidii.KB114863.1                             I 16 C 0
s Myotis_lucifugus.GL429887.1                             3471705 10 -   3747815 AT-T----T-TCC------------A-GG
i Myotis_lucifugus.GL429887.1                           I 16 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        16940 10 +     66751 AT-T----C-TCC------------A-GG
i Myotis_myotis.MyoMyo_scaffold_6123                    I 16 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_12795               837 10 -     87886 AT-T----T-TCC------------A-TG
i Myrmecophaga_tridactyla.MyrTri_scaffold_12795         C 0 C 0
s Nannospalax_galili.KL201303.1                            126276 11 +    362372 GT-T----AACCT------------A-GG
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                              12190 10 +     48152 AT-T----G-TCT------------G-GG
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4493258 10 -  14209539 AT-T----A-CCC------------A-GG
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3957371 10 -   4490290 at-t----a-ttc------------a-aa
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 I 4
s Nomascus_annamensis.k141_762468                            1984 10 -      2755 GC-T----G-TCT------------A-GG
i Nomascus_annamensis.k141_762468                       I 268 I 36
s Nomascus_concolor.k141_256540                              8594 10 -      8966 GC-T----G-TCT------------A-GG
i Nomascus_concolor.k141_256540                         C 0 C 0
s Nomascus_gabriellae.k141_202556                             356 10 -      1580 GC-T----G-TCT------------A-GG
i Nomascus_gabriellae.k141_202556                       C 0 C 0
s Nomascus_siki_b.tarseq_453                             7847 10 +     12787 GC-T----G-TCT------------A-GG
i Nomascus_siki_b.tarseq_453                        C 0 C 0
s Nomascus_siki_a.k141_421408                                  2449 10 +     16235 GC-T----G-TCT------------A-GG
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                40589 10 +   3668941 AT-T----A-CCT------------G-GG
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65573759 10 -  95554990 AT-T----A-TTC------------A-AG
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_6040852                            1395 10 +      1868 AT-T----A-TTC------------A-AG
i Nycticebus_coucang.k141_6040852                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65681941 10 +  89412551 AT-T----A-TTC------------A-AG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            5001788 10 -  23139505 AC-T----A-TCC------------A-AG
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3693428 10 +  10294119 at-g----g-TCT------------A-GG
i Octodon_degus.JH651621.1                              I 7 C 0
s Odobenus_rosmarus.KB229369.1                             687508 10 -   3126709 AT-T----A-CCC------------A-GG
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1086547 10 +   1425656 AG-T----A-TTC------------A-GA
i Odocoileus_virginianus.KZ101650.1                     C 0 I 4
s Okapia_johnstoni.LVCL01S0017931.1                         44620 10 +     78940 AG-T----A-TTC------------A-GA
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 I 4
s Ondatra_zibethicus.OndZib_scaffold_6821                  132333 10 +    145789 GT-T----A-CCC------------A-GT
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  45265 10 +     62360 TT-T----A-CCC------------A-GG
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7231045 10 -   7562323 at-t----a-ttc------------a-aa
i Orcinus_orca.KB316965.1                               C 0 I 4
s Orycteropus_afer.OryAfe_flattened_line_371885              2267 10 +      3658 AT-T----A-TTC------------A-GG
i Orycteropus_afer.OryAfe_flattened_line_371885         C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141885752 10 + 163896628 AC-T----A-TTC------------A-GG
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      317721 10 -    505867 AT-T----A-CCT------------A-GG
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        6894 10 -     53940 AT-T----A-TGC------------A-GG
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18014859 10 -  38779656 AT-T----A-TGC------------A-GG
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134085762 10 - 275406953 ag-t----a-ttc------------a-aa
i Ovis_aries.CM001582.2                                 C 0 I 4
s Ovis_canadensis.OviCan_scaffold_6251                      87014 10 +    140051 AG-T----A-TTC------------A-GA
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 I 4
s Pan_paniscus.CM003386.1                               127580271 10 - 205426864 AT-T----G-TCT------------A-GG
i Pan_paniscus.CM003386.1                               C 0 C 0
s Pan_troglodytes.CM009241.2                            120157432 10 - 196562556 AT-T----G-TCT------------A-GG
i Pan_troglodytes.CM009241.2                            C 0 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  42484 10 +    295523 AT-T----A-TCC------------A-GA
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3646298 10 +  18214204 AT-T----A-TCC------------A-GA
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5035935 10 -   6340057 AT-T----A-TCC------------A-GA
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1074653 10 -   1292953 ag-t----t-ttc------------a-ga
i Pantholops_hodgsonii.KE114631.1                       C 0 I 4
s Papio_anubis.CM001492.2                               188162171 10 - 188283584 AT-T----G-TCT------------A-GG
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              5261 10 +     25005 AT-T----G-TCT------------A-GG
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47519543 10 +  47705337 AT-T----G-TCT------------A-GG
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 73536 10 -    104429 AT-T----G-TCT------------A-GG
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   12066 10 +     14967 AT-T----G-TCT------------A-GG
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_899489                                   736 10 -     13896 AT-T----G-TCT------------A-GG
i Papio_ursinus.k141_899489                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    123950 10 -    135482 AT-T----A-TCC------------A-GA
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          12548 10 -     23713 AT-T----A-TGC------------A-GG
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           13699 10 +     61070 AT-T----A-TGC------------A-GG
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Perognathus_longimembris.PerPac_flattened_line_19359       3986  8 +     49596 AA-T----G-CCT------------G---
i Perognathus_longimembris.PerPac_flattened_line_19359  C 0 C 0
s Peromyscus_maniculatus.KI615458.1                       2841079 10 -   3366660 GT-T----A-CCC------------A-GG
i Peromyscus_maniculatus.KI615458.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    19839 10 -     36578 GT-C----A-TTT------------A-GC
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              5505 10 +      8220 AT-T----A-TTC------------A-AA
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 I 4
s Piliocolobus_badius.k141_1987485                           5724 10 -      5908 AT-T----G-TCT------------A-GG
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       6343 10 -     17985 AT-T----G-TCT------------A-GG
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            5710 10 +      7694 AT-T----G-TCT------------A-GG
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26744193 10 +  26888534 AT-T----G-TCT------------A-GG
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306           102426 10 +    112873 CT-T----A-TCC------------A-GG
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        I 16 C 0
s Pithecia_albicans.k141_991845                             45890 10 -     61926 AT-T----G-TAT------------A-GG
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        27266 10 +     78826 AT-T----G-TAT------------A-GG
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                             11321 10 -     15800 AT-T----G-TAT------------A-GG
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        14520 10 -     16101 AT-T----G-TAT------------A-GG
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          7749 10 +      9673 AT-T----G-TAT------------A-GG
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13476742 10 -  19735023 AT-T----G-TAT------------A-GG
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           15652 10 -     31692 AT-T----G-TAT------------A-GG
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990          12013 10 +     21690 AT-T----A-TTC------------A-AA
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 I 4
s Plecturocebus_bernhardi.k141_959214                       27828 10 +     44506 AT-T----G-TAT------------A-GG
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        28041 10 +     67491 AT-T----G-TAT------------A-GG
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      18280 10 -     98129 AT-T----G-TAT------------A-GG
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     27881 10 +    147771 AT-T----G-TAT------------A-GG
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         4516 10 -     43940 AT-T----G-TAT------------A-GG
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          8599 10 -     55515 AT-T----G-TAT------------A-GG
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         27953 10 +    152463 AT-T----G-TAT------------A-GG
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       5757 10 -    119457 AT-T----G-TAT------------A-GG
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         17675 10 +    134592 AT-T----G-TAT------------A-GG
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          28263 10 -     75465 AT-T----G-TAT------------A-GG
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              192899 10 -    373494 AT-T----G-TCT------------A-GG
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19813552 10 +  19899266 AT-T----G-TCT------------A-GG
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               9472 10 -     15069 AT-T----G-TCT------------A-GG
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              9587 10 +     14865 AT-T----G-TCT------------A-GG
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                6591 10 -      9567 AC-T----A-CTC------------A-GA
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6854524 10 +  12164890 AT-T----A-TGC------------A-GG
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coronatus.k141_1353159                         9622 10 +     11805 AT-T----A-TGC------------A-GG
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           48952 10 +     52369 AT-T----A-TGC------------A-GG
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         41339 10 -     44753 AT-T----A-TGC------------A-GG
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            23262 10 +     27322 AT-T----A-TGC------------A-GG
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       22914 10 -     53241 AT-T----A-TGC------------A-GG
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         45177 10 -     48185 AT-T----A-TGC------------A-GG
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           40895 10 +     77221 AT-T----A-TCC------------A-GC
i Psammomys_obesus.NESX01026517.1                       I 21 C 0
s Pteronotus_parnellii.KE867983.1                            9025  6 -     27784 ----------Tcc------------a-ag
i Pteronotus_parnellii.KE867983.1                       I 3 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        252864 10 -    344369 AT-T----A-CCC------------A-GG
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13250103 10 -  17261082 AT-T----A-TCC------------A-GG
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.ABRP02213537.1                            365 10 -      2094 AT-T----A-TCC------------A-GG
i Pteropus_vampyrus.ABRP02213537.1                      C 0 C 0
s Puma_concolor.QAVW01000427.1                          131542625 10 - 161321710 AT-T----A-TCC------------A-GA
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             33578 10 +     56732 AT-T----G-TCT------------A-GG
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6810075 10 +   6970761 AT-T----G-TCT------------A-GG
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             9464 10 +     18040 AT-T----G-TCT------------A-GG
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                23395 10 +     68503 AG-T----A-TCC------------A-GA
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 I 4
s Rattus_norvegicus.chr11                                13921290 10 +  90463843 AT-T----A-CTC------------A-AG
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1796206 10 +   2252614 AT-T----A-TCC------------A-GG
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                            3843 10 -     17045 AT-T----G-TCT------------A-GG
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206381330 10 - 206558726 AT-T----G-TCT------------A-GG
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44860233 10 -  45163003 AT-T----G-TCT------------A-GG
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                23308 10 +    109198 AT-T----A-TCC------------A-GG
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                      4279 10 -      4338 AG-T----A-TTC------------A-GA
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 I 4
s Saimiri_boliviensis.NW_024100938.1                     15678273 10 -  43202129 AT-T----G-TAT------------A-GG
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                       10187 10 +     34089 AT-T----G-TAT------------A-GG
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                             10126 10 -     60842 AT-T----G-TAT------------A-GG
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                             10220 10 +     67014 AT-T----G-TAT------------A-GG
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                             10197 10 +     60816 AT-T----G-TAT------------A-GG
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                10134 10 -     76454 AT-T----G-TAT------------A-GG
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17346906 10 -  30362882 AT-T----G-TAT------------A-GG
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         26227 10 -     62485 AT-T----G-TAT------------A-GG
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   42141 10 -    114521 AT-T----A-TCT------------G-GG
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        7079 10 +     15331 AT-T----G-TCT------------A-GG
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      12454 10 +     20762 AT-T----G-TCT------------A-GG
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         122460 10 +    130994 AT-T----G-TCT------------A-GG
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           41238 10 +     46263 AT-T----G-TCT------------A-GG
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     34383 10 +     42640 AT-T----G-TCT------------A-GG
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        17405 10 +     30600 AT-T----G-TCT------------A-GG
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  107487 10 -    120886 GT-T----A-CCC------------A-GG
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            26790 10 +    739146 AT-T----A-TCC------------A-GA
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17777117 14 -  27805282 AT-CAAAAA-TAT------------A-GG
i Sorex_araneus.JH798170.1                              I 20 C 0
s Spermophilus_dauricus.KZ294190.1                        2245794 10 +   2842873 AT-T----A-TCT------------T-GG
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             241628 10 -    276980 AT-T----A-CTG------------A-GA
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            35822 10 +     62062 AT-A----A-TCC------------A-GA
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189278045 10 + 218635234 gt-t----a-ttt------------g-ga
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                5282 10 +     20549 AT-T----A-TCC------------A-GG
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               19071 10 +     45698 AT-T----T-TCC------------A-CG
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      813418 11 +   1148477 ATTT----A-TCC------------A-GG
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  64054 11 +     99546 GTTT----A-TCC------------A-GG
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               32912 22 +     42269 at-t----a-tctcagatgcagaaaa-ag
i Tarsius_lariang.k141_609102                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194013704 10 - 194193292 AT-T----G-TCT------------A-GG
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             40937 10 -     47444 AT-C----A-TCT------------A-GG
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                  2199 10 -      3104 AT-T----A-TCC------------A-AG
i Tolypeutes_matacus.TolMat_scaffold_475685             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  141004 10 -    259118 AT-T----A-TCC------------A-GG
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        30726 10 +     38948 AT-T----G-TCT------------A-GG
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   24286 10 -     32910 AT-T----G-TCT------------A-GG
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      6187 10 -     12939 AT-T----G-TCT------------A-GG
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       5615 10 -     14244 AT-T----G-TCT------------A-GG
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           47008 10 -     54611 AT-T----G-TCT------------A-GG
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        4809 10 -     11566 AT-T----G-TCT------------A-GG
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     6993 10 -     15592 AT-T----G-TCT------------A-GG
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          5645 10 +     14371 AT-T----G-TCT------------A-GG
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   3931 10 +     12481 AT-T----G-TCT------------A-GG
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        3912 10 -     24393 AT-T----G-TCT------------A-GG
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       9056 10 -     28054 AT-T----G-TCT------------A-GG
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44663840 10 -  44834318 AT-T----G-TCT------------A-GG
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       6152 10 +     13828 AT-T----G-TCT------------A-GG
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                  11894 10 +     90398 AT-T----A-TTC------------T-AC
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 I 4
s Trichechus_manatus.JH594618.1                          16092128 10 +  31416278 AT-T----A-TTC------------A-GG
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2802836 10 -   3938065 AT-T----A-CCC------------A-GA
i Tupaia_chinensis.KB320831.1                           C 0 I 3
s Tupaia_tana.TupTan_flattened_line_68454                   11660 10 +     13056 AT-T----A-CCC------------A-GA
i Tupaia_tana.TupTan_flattened_line_68454               C 0 I 3
s Tursiops_truncatus.MRVK01000923.1                      69319775 10 -  96451834 at-t----a-ttc------------a-aa
i Tursiops_truncatus.MRVK01000923.1                     C 0 I 4
s Uropsilus_gracilis.UroGra_scaffold_4115                    2479 10 +    136657 GT-T----A-TCT------------G-GG
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 C 0
s Ursus_maritimus.KK498671.1                              6523272 10 +  28682327 at-t----a-cCC------------A-GG
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                 11189 10 -     20643 AT-T----A-TGC------------A-GG
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             30724 10 -     33872 AT-T----A-TGC------------A-GG
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1530807 10 -   2331223 GT-C----A-ctc------------a-ta
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                146947 10 -    281493 AT-T----A-CCT------------G-GG
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       133289 10 -    134049 AT-T----A-TCT------------T-GG
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        222369 10 -    227762 AT-T----A-CCC------------A-GG
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_202118                     2889 10 -      3360 AT-T----A-CCT------------A-GT
i Zapus_hudsonius.ZapHud_scaffold_202118                C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            4368 10 -     13665 AT-T----A-TTC------------A-AA
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 I 4
e Noctilio_leporinus.NocLep_scaffold_12062                  53142 337 +     94413 I
e Murina_feae.MurFea_scaffold_2254                          26669 255 -    100666 I
e Miniopterus_schreibersii.MinSch_scaffold_24116            40144 474 +     45743 I
e Miniopterus_natalensis.LDJU01000022.1                   8215685 474 +  10048721 I
e Elephantulus_edwardii.JH947210.1                        7837010 301 +  15467074 I
e Choloepus_hoffmanni.KN194586.1                           765691  0 +    964067 C
e Choloepus_didactylus.ChoDid_scaffold_36182                20387  0 -     21363 C
e Glis_glis.GliGli_scaffold_79770                           18213 58 -     18683 I
e Hylobates_pileatus_a.tarseq_592                             37267 2881 -     60944 I
e Propithecus_coquerelli.NW_012147997.1                    674065 544 -   2312742 I
e Muscardinus_avellanarius.MusAve_scaffold_9643             17160  2 +     98495 I
e Graphiurus_murinus.GraMur_scaffold_4493                   81514  0 +    118900 C
e Symphalangus_syndactylus.tarseq_24                        20205  0 -  13920577 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               19295 14 +    209709 AAT------ATCTTA-A-AC-AT
s Acinonyx_jubatus.LLWD01000356.1                         2042152 14 +   3721120 GGT------GAATTA-A-AC-AT
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    119810 14 -    189883 GAT------ATATGC-A-AC-AT
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10666015 14 +  23371972 GGT------GAATTA-A-AC-AT
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7102968 13 -  16596857 GGT------GAATTA-a-ac-a-
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_141108                   3175 14 -      7259 GAT------AAATTA-A-AC-AT
i Allactaga_bullata.AllBul_scaffold_141108              I 54 I 23
s Allenopithecus_nigroviridis.k141_2469532                   7192 14 -     60446 AAT------ATATTA-A-AC-AT
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         7906 14 -     29318 AAT------ATATTA-A-AC-AT
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         6844 14 +     38766 AAT------ATATTA-A-AC-AT
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          7802 14 -     80423 AAT------ATATTA-A-AC-AT
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              2744 14 +     19852 AAT------ATATTA-A-AT-AT
i Alouatta_belzebul.k141_276091                         C 0 I 6
s Alouatta_caraya.k141_664908                                4960 14 -     12443 AAT------ATATTA-A-AT-AT
i Alouatta_caraya.k141_664908                           C 0 I 6
s Alouatta_discolor.k141_2023149                             2287 14 +      5070 AAT------ATATTA-A-AT-AT
i Alouatta_discolor.k141_2023149                        C 0 I 6
s Alouatta_juara.k141_1458234                                  58 14 +     11617 AAT------ATATTA-A-AT-AT
i Alouatta_juara.k141_1458234                           C 0 I 6
s Alouatta_macconnelli.k141_2318944                          4769 14 -     24210 AAT------ATATTA-A-AT-AT
i Alouatta_macconnelli.k141_2318944                     C 0 I 6
s Alouatta_nigerrima.k141_494922                             1273 14 -      8325 AAT------ATATTA-A-AT-AT
i Alouatta_nigerrima.k141_494922                        C 0 I 6
s Alouatta_palliata.k141_405616                              7168 14 +     16794 AAT------ATATTA-A-AT-AT
i Alouatta_palliata.k141_405616                         C 0 I 6
s Alouatta_puruensis.k141_347198                             1220 14 +      9111 AAT------ATATTA-A-AT-AT
i Alouatta_puruensis.k141_347198                        C 0 I 6
s Alouatta_seniculus.k141_790278                             6468 14 -      9835 AAT------ATATTA-A-AT-AT
i Alouatta_seniculus.k141_790278                        C 0 I 6
s Ammotragus_lervia.NIVO01013474.1                        3529180  4 +   4113121 ----------------A-AC-A-
i Ammotragus_lervia.NIVO01013474.1                      I 4 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      395833 14 -    631301 GAT------GAATTA-A-AC-AT
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             6592  4 +     55446 ----------------A-AC-A-
i Antilocapra_americana.AntAmePen_scaffold_27338        I 4 C 0
s Aotus_azarae.k141_3170768                                 68076 12 +     78111 AAT------ATATTA-A-AC---
i Aotus_azarae.k141_3170768                             C 0 I 6
s Aotus_griseimembra.k141_3275623                           11017 12 +     22701 AAT------ATATTA-A-AC---
i Aotus_griseimembra.k141_3275623                       C 0 I 6
s Aotus_nancymaae.KZ196176.1                              5754986 12 +   9889416 AAT------ATATTA-A-AC---
i Aotus_nancymaae.KZ196176.1                            C 0 I 6
s Aotus_trivirgatus.k141_1740727                            11565 12 -    104377 AAT------ATATTA-A-AC---
i Aotus_trivirgatus.k141_1740727                        C 0 I 6
s Aotus_vociferans.k141_718647                              11594 12 +     23246 AAT------ATATTA-A-AC---
i Aotus_vociferans.k141_718647                          C 0 I 6
s Aplodontia_rufa.AprRuf_scaffold_101456                     4217 15 +     11424 GAT------AAATTAAA-AC-AT
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        8169 14 +      9265 GAT------AAATTA-A-AC-AG
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                13915 14 -     29036 GAT------GAATTA-A-AC-AT
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9544878 14 +  39197703 AAT------ATATTA-A-AC-AA
i Ateles_geoffroyi_b.tarseq_2582                           C 0 I 6
s Ateles_belzebuth.k141_1348307                             66152 14 +     85812 AAT------ATATTA-A-AC-AA
i Ateles_belzebuth.k141_1348307                         C 0 I 6
s Ateles_chamek.k141_1072810                                17162 14 +     89302 AAT------ATATTA-A-AC-AA
i Ateles_chamek.k141_1072810                            C 0 I 6
s Ateles_geoffroyi_a.k141_1300742                             21666 14 -     58268 AAT------ATATTA-A-AC-AA
i Ateles_geoffroyi_a.k141_1300742                         C 0 I 6
s Ateles_marginatus.k141_899112                             69660 14 +    119057 AAT------ATATTA-A-AC-AA
i Ateles_marginatus.k141_899112                         C 0 I 6
s Ateles_paniscus.k141_1631200                              11629 14 -     25888 AAT------ATATTA-A-AC-AA
i Ateles_paniscus.k141_1631200                          C 0 I 6
s Avahi_laniger.k141_2840928                                12726 14 -     16375 GAT------AAATTA-A-AC-AT
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_1363236                                18 14 +     13465 GAT------AAATTA-A-AC-AT
i Avahi_peyrierasi.k141_1363236                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26386615  6 +  51448160 ----------------a-acaat
i Balaenoptera_acutorostrata.KI537095.1                 I 4 I 7891
s Balaenoptera_bonaerensis.DF502048.1                       11789  6 -     13118 ----------------a-acaat
i Balaenoptera_bonaerensis.DF502048.1                   I 4 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   51378  4 -     72089 ----------------A-AC-A-
i Beatragus_hunteri.BeaHun_scaffold_21644               I 4 C 0
s Bison_bison.KN264915.1                                   306105  4 -   6870073 ----------------A-AC-A-
i Bison_bison.KN264915.1                                I 4 C 0
s Bos_indicus.CM003021.1                                 22960211  4 + 161108492 ----------------A-AC-A-
i Bos_indicus.CM003021.1                                I 4 C 0
s Bos_mutus.JH883513.1                                     422390  4 +    998990 ----------------A-AC-A-
i Bos_mutus.JH883513.1                                  I 4 C 0
s Bos_taurus.CM000177.6                                  22668863  4 + 158972876 ----------------A-AC-A-
i Bos_taurus.CM000177.6                                 I 4 C 0
s Bubalus_bubalis.KI419065.1                               677713  4 +   1914593 ----------------A-AC-A-
i Bubalus_bubalis.KI419065.1                            I 4 C 0
s Cacajao_ayresi.k141_724503                               119492 14 -    171031 AAT------ATATTA-A-AC-AT
i Cacajao_ayresi.k141_724503                            C 0 I 6
s Cacajao_calvus.k141_96166                                 18512 14 +    125063 AAT------ATATTA-A-AC-AT
i Cacajao_calvus.k141_96166                             C 0 I 6
s Cacajao_hosomi.k141_303789                                20559 14 -    216513 AAT------ATATTA-A-AC-AT
i Cacajao_hosomi.k141_303789                            C 0 I 6
s Cacajao_melanocephalus.k141_1160263                       13102 14 -    134917 AAT------ATATTA-A-AC-AT
i Cacajao_melanocephalus.k141_1160263                   C 0 I 6
s Camelus_bactrianus.KN276303.1                           3225709 14 -   8989139 aat------aaatta-a-ac-at
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           403409 14 -  15254737 aat------aaatta-a-ac-at
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2979147 14 +   6889770 aat------aaatta-a-ac-at
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11528871 14 +  39901454 GGT------GAATTA-A-AT-AC
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   23845 14 +     87036 GGT------GAATTA-A-AT-AC
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11275768 14 -  35597290 GGT------GAATTA-A-AT-AC
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11098266 14 +  39895921 GGT------GAATTA-A-AT-AC
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16465050 14 -  44759192 GGT------GAATTA-A-AT-AC
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21336614  4 + 157394656 ----------------A-AC-A-
i Capra_aegagrus.CM003214.1                             I 4 C 0
s Capra_hircus.CM004562.1                               135714967  4 - 157403528 ----------------A-AC-A-
i Capra_hircus.CM004562.1                               I 4 C 0
s Carlito_syrichta.NW_007248099.1                          315074 20 +    345090 tatttgataaaattc-a-ac-at
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               64890 14 +     67245 GAT------GAATTA-A-AC-AT
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_1326                     1720 14 -    202837 GGT------GAATTG-A-AC-AT
i Castor_canadensis.CasCan_scaffold_1326                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   165679  5 -    276539 ----------------A-AC-AT
i Catagonus_wagneri.CatWag_scaffold_1305                I 4 C 0
s Cavia_aperea.AVPZ01000278.1                            15791953 12 -  24422027 AAC------AAATTA-A-AT---
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15803898 12 -  24440124 AAC------AAATTA-A-AT---
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       182070 12 +    436027 AAC------AAATTA-A-AT---
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18897228 14 -  29618158 AAT------ATATTA-A-AC-AT
i Cebus_albifrons.Contig22                              C 0 I 6
s Cebus_olivaceus.k141_93739                                13878 14 -     26817 AAT------ATATTA-A-AC-AT
i Cebus_olivaceus.k141_93739                            C 0 I 6
s Cebus_unicolor.k141_239009                                18121 14 +     25043 AAT------ATATTA-A-AC-AT
i Cebus_unicolor.k141_239009                            C 0 I 6
s Cephalopachus_bancanus.k141_702587                        14111 20 +     21754 tatttgataaaattc-a-ac-at
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4370699 14 +   7569818 gat------atatta-a-at-at
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_171732          856 14 +      8380 GAT------ATATTA-A-AT-AT
i Ceratotherium_simum_cottoni.CerCot_scaffold_171732    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6561131 14 +   6739814 AAT------ATATTA-A-AC-AT
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      32608 14 +     60454 AAT------ATATTA-A-AC-AT
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          7812 14 -     21101 AAT------ATATTA-A-AC-AT
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         65122 14 -    107033 AAT------ATATTA-A-AC-AT
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        7983 14 -     17608 AAT------ATATTA-A-AC-AT
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          5151 14 +     45019 AAT------ATATTA-A-AC-AT
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           5419 14 +     15177 AAT------ATATTA-A-AC-AT
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          8033 14 +     16677 AAT------ATATTA-A-AC-AT
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           30221 14 +     35983 AAT------ATATTA-A-AC-AT
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11996754 14 +  12117833 AAT------ATATTA-A-AC-AT
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46483736 14 +  46592721 AAT------ATATTA-A-AC-AT
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                       1839 14 -     27215 AAT------ATATTA-A-AC-AT
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       8047 14 +     35577 AAT------ATATTA-A-AC-AT
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        7841 14 -     25661 AAT------ATATTA-A-AC-AT
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        8005 14 -     17744 AAT------ATATTA-A-AC-AT
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        27374 14 +     37128 AAT------ATATTA-A-AC-AT
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           6359 14 -      6963 GAA------AAATTA-A-TT-AT
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           64942 14 -     68416 GAT------AAACTA-A-AC-AT
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_854352                            1243 14 +     27737 GAT------AAACTA-A-AC-AT
i Cheirogaleus_medius.k141_854352                       C 0 C 0
s Cheracebus_lucifer.k141_619653                            11186 14 -     18223 AAT------ATATTA-A-AC-AT
i Cheracebus_lucifer.k141_619653                        C 0 I 6
s Cheracebus_lugens.k141_996499                              2927 14 +    188999 AAT------ATATTA-A-AC-AT
i Cheracebus_lugens.k141_996499                         C 0 I 6
s Cheracebus_regulus.k141_2128895                           47226 14 +     57117 AAT------ATATTA-A-AC-AT
i Cheracebus_regulus.k141_2128895                       C 0 I 6
s Cheracebus_torquatus.k141_315545                          51906 14 +     54541 AAT------ATACTA-A-AC-AT
i Cheracebus_torquatus.k141_315545                      C 0 I 6
s Chinchilla_lanigera.JH721867.1                         15966654 14 +  43084221 GAC------AAATTA-A-AT-AT
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         76707 10 +    196370 AAT------ATATTA-A------
i Chiropotes_israelita.k141_1189915                     C 0 I 10
s Chiropotes_sagulatus.k141_773804                          20888 10 +     40510 AAT------ATATTA-A------
i Chiropotes_sagulatus.k141_773804                      C 0 I 10
s Chlorocebus_aethiops.ctg22                             15145567 14 -  15256731 AAT------ATATTA-A-AC-AT
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      40031 14 -     53260 AAT------ATATTA-A-AC-AT
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101150590 14 + 101219884 AAT------ATATTA-A-AC-AT
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                20387 14 -     21363 GAT------ATATTA-A-AC-AC
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           765691 14 +    964067 GAT------AAATTA-A-AC-AC
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_304221              6184 14 -      7053 GAT------AAGTTA-A-AC-AT
i Chrysochloris_asiatica.ChrAsi_scaffold_304221         C 0 C 0
s Colobus_angolensis.KN985967.1                          10890360 14 +  10971483 AAT------ATATCA-A-AC-AT
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147668288 14 + 156195979 AAT------ATATCA-A-AC-AT
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            20271 14 +     23629 AAT------ATATCA-A-AC-AT
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60624684 13 +  78930452 GAA-------AATTA-G-AC-AT
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         5567 14 -      5782 GAT------AAATTA-A-AC-AT
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 284714 14 -    399297 GAT------ATATGC-A-GC-AT
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53037000 14 +  72327488 GAT------ATATGC-T-AC-AT
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              4555 13 -     22648 AAA-------AATTA-T-AC-TA
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            60084 14 -     70449 GGT------GAATTA-A-AT-AT
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  216849 14 -    956709 ACC------AAATTA-A-AA-AT
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 38462 14 -     67205 gac------aaaTTA-G-AC-AT
i Ctenomys_sociabilis.CteSoc_scaffold_19489             I 97 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                23190 14 +     26546 GAC------AAATTA-A-AC-AT
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             64317 14 -    236241 GAC------AAATTA-A-AC-AT
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          187422 14 -   6883506 gaa------aaatta-a-at-gt
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16850882 14 +  31942871 GAT------AAATTA-A-AC-AT
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80043201  6 -  96802777 ----------------a-acaat
i Delphinapterus_leucas.KZ290064.1                      I 4 C 0
s Desmodus_rotundus.KZ672188.1                           18704111 14 -  18957592 AAT------AAATTG-A-AC-AT
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 329098 14 +    993696 Gat------atatta-a-at-at
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   9732 14 +    151128 GAT------ATATTA-A-AT-AT
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   162262 14 +    228994 GAC------AAATTA-A-AC-AT
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                42895 12 -     73477 GAC------AAATTA-A-AC---
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           23007350 10 -  44670279 aag------aagctA-A------
i Echinops_telfairi.JH980316.1                          C 0 I 2
s Eidolon_helvum.KE772537.1                                 16309 14 +     24177 GAT------AAATTA-A-AT-GT
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1499175  4 +   1727528 ----------------A-AC-A-
i Elaphurus_davidianus.JRFZ01086400.1                   I 4 C 0
s Ellobius_lutescens.LOEQ01003611.1                        245702 14 -    369425 GAT------ATATGA-G-AT-AA
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01076532.1                           2053 14 +      9159 GAT------ATATGA-G-AT-AT
i Ellobius_talpinus.LOJH01076532.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85880034 13 +  99434291 GGT------GAATTA-A-AC-A-
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4711888 14 +   6522550 GAT------AAATTA-A-AC-AT
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5858958 14 -   7175178 GAT------AGATGA-A-AC-AT
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13357444 14 +  41866177 GAT------AGATGA-A-AC-AT
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          18934 14 +     92910 GAT------AGATGA-A-AC-AT
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11544419 13 +  16010500 AAA-------ATCTA-G-AC-AT
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48782600 14 -  48907691 AAT------ATATTA-A-AC-AT
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          321460  6 +    330699 ----------------A-ACAAT
i Eschrichtius_robustus.EscRob_flattened_line_685       I 4 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             67912  6 +     89355 ----------------A-ACAAT
i Eubalaena_japonica.EubJap_flattened_line_7756         I 4 C 0
s Eulemur_albifrons.k141_715837                             11008 14 +     13586 GAT------AAATTA-A-AC-AT
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_419870                                116 14 +      2668 GAT------AAATTA-A-AC-AT
i Eulemur_collaris.k141_419870                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            17404 14 +     36558 GAT------AAATTA-A-AC-AT
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            13726 14 +     60246 GAT------AAATTA-A-AC-AT
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                17211 14 +    109717 GAT------AAATTA-A-AC-AT
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 5194 14 -     19505 GAT------AAATTA-A-AC-AT
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                21869 14 +     27497 GAT------AAATTA-A-AC-AT
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           24319 14 +     26808 GAT------AAATTA-A-AC-AT
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                39057 14 +     46535 GAT------AAATTA-A-AC-AT
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              21798 14 -     29447 GAT------AAATTA-A-AC-AT
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129901727 14 - 159252932 GGT------GAATTA-A-AC-AT
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129288704 14 - 158578461 GGT------GAATTA-A-AC-AT
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 29894 14 +     52776 GGT------GAATTA-A-AC-AT
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13899746 14 -  19261668 GAC------AAATTA-A-AC-AT
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     217043 14 -    847004 GAT------AAATTA-A-AC-AG
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           19405 14 -     43889 GAT------AAATTA-A-AC-AG
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          16546 14 +     27357 GAT------AAATTA-A-AC-AG
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               161321 14 +    324696 GAT------AAATTA-A-AT-AT
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    188903  4 -    189561 ----------------a-ac-a-
i Giraffa_tippelskirchi.LVKQ01S012154.1                 I 4 C 0
s Gorilla_beringei.k141_111300                              11001 14 -     14630 AAT------ATATTA-A-AC-AT
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119658101 14 - 195582420 AAT------ATATTA-A-AC-AT
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         7800 14 +     10286 AAT------AAATTA-A-AC-AT
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             6281 14 -     11661 AAT------AAATTA-A-AC-AT
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                            11605 14 +     56096 AAT------AAATTA-A-AC-AT
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        34854 14 -     42470 AAT------AAATTA-A-AC-AT
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        51480 14 -     54384 AAT------AAATTA-A-AC-AT
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              25202 14 +     53719 GGT------GAATTA-A-AT-AT
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                35994  4 -     91191 ----------------A-AC-A-
i Hemitragus_hylocrius.HemHyl_scaffold_16669            I 4 C 0
s Heterocephalus_glaber.JH602058.1                        2563913 14 +  31725842 GAC------AATTTA-A-AC-AT
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               65494 13 +     73687 GAT------GAGTTA-A--C-TT
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              153283  5 +    277961 ----------------A-AC-AT
i Hippopotamus_amphibius.HipAmp_scaffold_1308           I 4 C 0
s Hipposideros_armiger.JXIK01001085.1                      287239 14 -    477199 GAT------AAATTA-A-AC-AT
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959               4513 14 +     26078 GAT------AAATTA-A-AC-AT
i Hipposideros_galeritus.HipGal_scaffold_52959          C 0 C 0
s Hoolock_leuconedys.ctg79                                     10920 14 -   7690867 AAT------ATCTTA-A-AC-AT
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 25636 14 -     67322 GGT------GAATTA-A-AC-AT
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           23554 12 -    119109 GAC------AAATTA-A-AC---
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_1048809                               89 14 -      6555 AAT------ATCTTA-A-AC-AT
i Hylobates_abbotti.k141_1048809                        C 0 C 0
s Hylobates_agilis.k141_1136966                              1496 14 +      9785 AAT------ATCTTA-A-AC-AT
i Hylobates_agilis.k141_1136966                         C 0 C 0
s Hylobates_klossii.k141_1069878                               36 14 +      2316 AAT------ATCTTA-A-AC-AT
i Hylobates_klossii.k141_1069878                        C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14630322 14 -  25970782 AAT------ATCTTA-A-AC-AT
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            2873 14 +      4161 AAT------ATCTTA-A-AC-AT
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                    11837 14 +     22540 AAC------AAATAA-A-GC-AT
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7132103 14 +  13083262 GAT------AAATTA-A-AC-AG
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   3338 14 +      3484 GAT------AAATTA-A-AC-AT
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              15428  6 +     17520 ----------------A-ACAGT
i Inia_geoffrensis.IniGeo_flattened_line_66725          I 4 C 0
s Jaculus_jaculus.JH725517.1                              8581091 14 +  11848649 GAT------AAATTA-A-AC-AT
i Jaculus_jaculus.JH725517.1                            C 0 I 24
s Kogia_breviceps.KogBre_flattened_line_35920               30057  6 +     37189 ----------------A-ACAAT
i Kogia_breviceps.KogBre_flattened_line_35920           I 4 C 0
s Lagothrix_lagothricha.k141_12968                          55749 14 -    147782 AAT------ATATTA-A-AC-AC
i Lagothrix_lagothricha.k141_12968                      C 0 I 6
s Lasiurus_borealis.LasBor_scaffold_59542                    9589 14 +     26176 GAT------AAATTA-A-AT-AT
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258413158 14 - 285822530 AAT------AAATTA-A-AC-AT
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        30477 14 +     39228 GAT------AAATTA-A-AC-AT
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            59843 14 +     63517 GAT------AAATTA-A-AC-AT
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        38224 14 -     38897 GAT------AAATTA-C-AC-AT
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      4269 14 -     13103 GAT------AAATTA-A-AC-AT
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3094475 14 -   3498232 GGT------GAATTA-A-AC-AT
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_470947                     490 14 -      1692 GAG------ATATTA-A-AC-AT
i Lepus_americanus.LepAme_scaffold_470947               C 0 C 0
s Lipotes_vexillifer.KE558548.1                            142350  6 +   3060487 ----------------a-acaat
i Lipotes_vexillifer.KE558548.1                         I 4 C 0
s Lophocebus_aterrimus.ctg55                             19254220 14 +  19376315 AAT------ATATTA-A-AC-AT
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           16986 14 +     84689 GAT------AAAATA-A-AC-AG
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3784719 14 +   6799190 GAT------AAAATA-A-AC-AG
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20601059 14 -  62548349 GAT------AAGTTA-A-GT-GT
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11097722 14 +  39895028 GGT------GAATTA-A-AT-AC
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             25969 14 +     74745 AAT------ATATTA-A-AC-AT
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12712432 14 +  12821369 AAT------ATATTA-A-AC-AT
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                5005 14 -     26467 AAT------ATATTA-A-AC-AT
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           52876 14 +     63263 AAT------ATATTA-A-AC-AT
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 4986 14 -     26361 AAT------ATATTA-A-AC-AT
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_2667654                                1290 14 -      5626 AAT------ATATTA-A-AC-AT
i Macaca_leonina.k141_2667654                           C 0 C 0
s Macaca_maura.k141_251854                                  51405 14 -     79256 AAT------ATATTA-A-AC-AT
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196041503 14 + 196197964 AAT------ATATTA-A-AC-AT
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11451673 14 +  11645122 AAT------ATATTA-A-AC-AT
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                  10359 14 -     46448 AAT------ATATTA-A-AC-AT
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                8021 14 -     13212 AAT------ATATTA-A-AC-AT
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 21702 14 -     55006 AAT------ATATTA-A-AC-AT
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43847125 14 +  43892939 AAT------ATATTA-A-AC-AT
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               22987 14 -     24607 AAT------ATATTA-A-AC-AT
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                              10356 14 -     27140 AAT------ATATTA-A-AC-AT
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                704907 14 +    802869 GAT------AGATTA-A-AT-AT
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43443389 14 -  43563597 AAT------ATATTA-A-AC-AT
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4456188 14 -   4543643 AAT------ATATTA-A-AC-AT
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            154712 14 +    252755 GAT------AAAGTA-A-AC-AT
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             42311 14 +     58827 GAT------AAAGTA-A-AC-AT
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36879969 14 +  64221397 GAT------AAATTA-A-AC-AG
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       68687 15 -    234502 GAT------AAATTA-AAAC-AC
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             9128 13 -     87323 GGT------GAATTA-A-AC-A-
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 3935 14 +    115071 AGT------ACATGC-G-AC-AT
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1053573 14 -  26018355 GAT------ACATGC-A-AC-AT
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    5019  6 -     12939 ----------------A-ACAAT
i Mesoplodon_bidens.MesBid_scaffold_96348               I 4 C 0
s Microcebus_murinus.CM007691.1                          16516198 14 +  47401472 GAT------AAATTA-A-AC-AT
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  47233 10 -     48017 AAT------ACGCTA-T------
i Microgale_talazaci.MicTal_scaffold_34660              C 0 I 2
s Micronycteris_hirsuta.MicHir_scaffold_37978               27839 14 -     32043 GAT------AAATTA-A-AT-AT
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22826536 14 -  98408828 GAT------ACGTGA-A-AT-AT
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         7939 14 +     29742 AAT------ATATTA-A-AC-AT
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        19877 14 -    104932 GTT------GAATTA-A-AC-AT
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     6892 14 -     12809 GAT------AAATTA-A-AT-AT
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 152794  6 +    154973 ----------------A-ACAAT
i Monodon_monoceros.MonMon_M_scaffold_5598              I 4 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                166353 14 +    265003 GAT------AAATTA-A-AC-AT
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  9571  4 -     19904 ----------------A-AC-A-
i Moschus_moschiferus.MosMos_scaffold_78805             I 4 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  152928 14 -    168139 GGT------GAATTA-A-AT-AT
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Mus_caroli.LT608236.1                                  70773818 14 +  92629107 GAT------TCATGC-A-GC-CT
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75495879 14 +  98207768 GAT------TCATGC-A-GC-CT
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67562612 14 +  89017189 GAT------ACATGC-A-GC-CG
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74338583 14 +  97876770 GAT------TCATGC-A-GC-CT
i Mus_spretus.CM004110.1                                C 0 C 0
s Mustela_putorius.JH417978.1                             4431223 13 -  28371801 GGT------GAATTA-a-ac-a-
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     98294 14 -    117718 GAC------AAATGA-A-GC-AT
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               974215 14 +   8389877 GAT------AAATTA-A-AC-GT
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5025294 14 +   6462685 GAT------AAATTA-A-AC-GT
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3471715 14 -   3747815 GAT------AAATTA-A-AC-GT
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        16950 14 +     66751 GAT------AAATTA-A-AC-AT
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_12795               847 14 -     87886 GAT------AAAGTA-A-AC-AT
i Myrmecophaga_tridactyla.MyrTri_scaffold_12795         C 0 C 0
s Nannospalax_galili.KL201303.1                            126287 14 +    362372 GAG------ACACAA-A-AT-AT
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                              12200 14 +     48152 AAT------ATATCA-A-AC-AT
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4493268 14 -  14209539 GGT------GAATTA-A-AC-AT
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3957385  6 -   4490290 ----------------a-acaat
i Neophocaena_asiaeorientalis.KZ688543.1                I 4 C 0
s Nomascus_annamensis.k141_881190                             307 14 -      2113 AAT------ATCTTA-A-AC-AT
i Nomascus_annamensis.k141_881190                       I 10 C 0
s Nomascus_concolor.k141_256540                              8604 14 -      8966 AAT------ATCTTA-A-AC-AT
i Nomascus_concolor.k141_256540                         C 0 C 0
s Nomascus_gabriellae.k141_202556                             366 14 -      1580 AAT------ATCTTA-A-AC-AT
i Nomascus_gabriellae.k141_202556                       C 0 C 0
s Nomascus_siki_b.tarseq_453                             7857 14 +     12787 AAT------ATCTTA-A-AC-AT
i Nomascus_siki_b.tarseq_453                        C 0 C 0
s Nomascus_siki_a.k141_421408                                  2459 14 +     16235 AAT------ATCTTA-A-AC-AT
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                40599 14 +   3668941 GGT------GAATTA-A-AT-AC
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65573769 14 -  95554990 GAT------AAAATA-A-AC-AG
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_6040852                            1405 14 +      1868 GAT------AAAATA-A-AC-AG
i Nycticebus_coucang.k141_6040852                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65681951 14 +  89412551 GAT------AAAATA-A-AC-AG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            5001798 14 -  23139505 GAG------GTATTA-A-GC-AT
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3693438 14 +  10294119 GAC------AAATTA-A-AC-AT
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             687518 14 -   3126709 GGT------GAATTA-A-AC-AT
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1086561  4 +   1425656 ----------------A-AC-A-
i Odocoileus_virginianus.KZ101650.1                     I 4 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         44634  4 +     78940 ----------------A-AC-A-
i Okapia_johnstoni.LVCL01S0017931.1                     I 4 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  132343 14 +    145789 GAT------ACATGA-A-AT-AT
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  45275 14 +     62360 GAT------ACATGC-A-AC-AT
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7231059  6 -   7562323 ----------------a-acaat
i Orcinus_orca.KB316965.1                               I 4 C 0
s Orycteropus_afer.OryAfe_flattened_line_371885              2277 14 +      3658 GAG------AAGTTA-A-CC-AT
i Orycteropus_afer.OryAfe_flattened_line_371885         C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141885762 14 + 163896628 GAG------ATATTA-A-AC-AT
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      317731 14 -    505867 GGT------GAATTA-A-AT-AC
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        6904 14 -     53940 GAT------AAATTA-A-AC-AG
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18014869 14 -  38779656 GAT------AAATTA-A-AC-AG
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134085776  4 - 275406953 ----------------a-ac-a-
i Ovis_aries.CM001582.2                                 I 4 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      87028  4 +    140051 ----------------A-AC-A-
i Ovis_canadensis.OviCan_scaffold_6251                  I 4 C 0
s Pan_paniscus.CM003386.1                               127580281 14 - 205426864 AAT------ATATTA-A-AC-AT
i Pan_paniscus.CM003386.1                               C 0 I 17
s Pan_troglodytes.CM009241.2                            120157442 14 - 196562556 AAT------ATATTA-A-AC-AT
i Pan_troglodytes.CM009241.2                            C 0 I 17
s Panthera_onca.PanOnc_flattened_line_1615                  42494 14 +    295523 GGT------GAATTA-A-AC-AT
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3646308 14 +  18214204 GGT------GAATTA-A-AC-AT
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5035945 14 -   6340057 GGT------GAATTA-A-AC-AT
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1074667  4 -   1292953 ----------------a-ac-a-
i Pantholops_hodgsonii.KE114631.1                       I 4 C 0
s Papio_anubis.CM001492.2                               188162181 14 - 188283584 AAT------ATATTA-A-AC-AT
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              5271 14 +     25005 AAT------ATATTA-A-AC-AT
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47519553 14 +  47705337 AAT------ATATTA-A-AC-AT
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 73546 14 -    104429 AAT------ATATTA-A-AC-AT
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   12076 14 +     14967 AAT------ATATTA-A-AC-AT
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_899489                                   746 14 -     13896 AAT------ATATTA-A-AC-AT
i Papio_ursinus.k141_899489                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    123960 14 -    135482 GGT------GCTTTA-C-AG-AT
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          12558 14 -     23713 GAT------AAATTA-A-AC-AG
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           13709 14 +     61070 GAT------AAATTA-A-AC-AG
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Peromyscus_maniculatus.KI615458.1                       2841089 14 -   3366660 GAT------ACATGC-A-AC-AT
i Peromyscus_maniculatus.KI615458.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    19849 14 -     36578 GAC------AAATTA-A-AC-AT
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              5519  6 +      8220 ----------------A-ACAAT
i Phocoena_phocoena.PhoPho_flattened_line_53071         I 4 C 0
s Piliocolobus_badius.k141_1987485                           5734 14 -      5908 AAT------ATATCA-A-AC-AT
i Piliocolobus_badius.k141_1987485                      C 0 C 0
s Piliocolobus_gordonorum.k141_1270531                       6353 14 -     17985 AAT------ATATCA-A-AC-AT
i Piliocolobus_gordonorum.k141_1270531                  C 0 C 0
s Piliocolobus_kirkii.k141_929665                            5720 14 +      7694 AAT------ATATCA-A-AC-AT
i Piliocolobus_kirkii.k141_929665                       C 0 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26744203 14 +  26888534 AAT------ATATCA-A-AC-AT
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306           102436 14 +    112873 GAT------AAATTA-A-AC-AT
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             45900 14 -     61926 AAT------ATATTA-A-AC-AT
i Pithecia_albicans.k141_991845                         C 0 I 6
s Pithecia_chrysocephala.k141_159118                        27276 14 +     78826 AAT------ATATTA-A-AC-AT
i Pithecia_chrysocephala.k141_159118                    C 0 I 6
s Pithecia_hirsuta.k141_1152968                             11331 14 -     15800 AAT------ATATTA-A-AC-AT
i Pithecia_hirsuta.k141_1152968                         C 0 I 6
s Pithecia_mittermeieri.k141_2119203                        14530 14 -     16101 AAT------ATATTA-A-AC-AT
i Pithecia_mittermeieri.k141_2119203                    C 0 I 6
s Pithecia_pissinattii.k141_1102319                          7759 14 +      9673 AAT------ATATTA-A-AC-AT
i Pithecia_pissinattii.k141_1102319                     C 0 I 6
s Pithecia_pithecia.tarseq_313                           13476752 14 -  19735023 AAT------ATATTA-A-AC-AC
i Pithecia_pithecia.tarseq_313                          C 0 I 6
s Pithecia_vanzolinii.k141_831006                           15662 14 -     31692 AAT------ATATTA-A-AC-AT
i Pithecia_vanzolinii.k141_831006                       C 0 I 6
s Platanista_gangetica.PlaMin_flattened_line_72990          12027  6 +     21690 ----------------A-ACAAT
i Platanista_gangetica.PlaMin_flattened_line_72990      I 4 C 0
s Plecturocebus_bernhardi.k141_959214                       27838 14 +     44506 AAT------ATATTA-A-AC-AT
i Plecturocebus_bernhardi.k141_959214                   C 0 I 6
s Plecturocebus_brunneus.k141_498086                        28051 14 +     67491 AAT------ATATTA-A-AC-AT
i Plecturocebus_brunneus.k141_498086                    C 0 I 6
s Plecturocebus_caligatus.k141_2539816                      18290 14 -     98129 AAT------ATATTA-A-AC-AT
i Plecturocebus_caligatus.k141_2539816                  C 0 I 6
s Plecturocebus_cinerascens.k141_744510                     27891 14 +    147771 AAT------ATATTA-A-AC-AT
i Plecturocebus_cinerascens.k141_744510                 C 0 I 6
s Plecturocebus_cupreus.k141_1145860                         4526 14 -     43940 AAT------ATATTA-A-AC-AT
i Plecturocebus_cupreus.k141_1145860                    C 0 I 6
s Plecturocebus_dubius.k141_3565563                          8609 14 -     55515 AAT------ATATTA-A-AC-AT
i Plecturocebus_dubius.k141_3565563                     C 0 I 6
s Plecturocebus_grovesi.k141_242819                         27963 14 +    152463 AAT------ATATTA-A-AC-AT
i Plecturocebus_grovesi.k141_242819                     C 0 I 6
s Plecturocebus_hoffmannsi.k141_985533                       5767 14 -    119457 AAT------ATATTA-A-AC-AT
i Plecturocebus_hoffmannsi.k141_985533                  C 0 I 6
s Plecturocebus_miltoni.k141_841561                         17685 14 +    134592 AAT------ATATTA-A-AC-AT
i Plecturocebus_miltoni.k141_841561                     C 0 I 6
s Plecturocebus_moloch.k141_890597                          28273 14 -     75465 AAT------ATATTA-A-AC-AT
i Plecturocebus_moloch.k141_890597                      C 0 I 6
s Pongo_abelii.NDHI03003816.1                              192909 14 -    373494 AAT------ATATTA-A-AC-AT
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19813562 14 +  19899266 AAT------ATATTA-A-AC-AT
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               9482 14 -     15069 AAT------ATATCA-A-AC-AT
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              9597 14 +     14865 AAT------ATATCA-A-AC-AT
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                6601 13 -      9567 GAT------GAGTTA-A--C-TT
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6854534 14 +  12164890 AAT------AAATTA-A-AC-AT
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coronatus.k141_1353159                         9632 14 +     11805 GAT------AAATTA-A-GT-AT
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           48962 14 +     52369 GAT------AAATTA-A-AC-AT
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         41349 14 -     44753 GAT------AAATTA-A-AC-AT
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            23272 14 +     27322 GAT------AAATTA-A-AC-AT
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       22924 14 -     53241 GAT------AAATTA-A-AT-AT
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         45187 14 -     48185 GAT------AAATTA-A-AT-AT
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           40905 14 +     77221 GGT------ACATGC-C-AC-at
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            9031 14 -     27784 gat------aaataa-a-at-gt
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        252874 13 -    344369 GGT------GAATTA-A-AC-A-
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13250113 14 -  17261082 GAT------AGATTA-A-AT-AT
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.ABRP02213537.1                            375 14 -      2094 GAT------AGAGTA-A-AT-AT
i Pteropus_vampyrus.ABRP02213537.1                      C 0 C 0
s Puma_concolor.QAVW01000427.1                          131542635 14 - 161321710 GGT------GAATTA-A-AC-AT
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             33588 14 +     56732 AAT------ATATCA-A-AC-AT
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6810085 14 +   6970761 AAT------ATATCA-A-AC-AT
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             9474 14 +     18040 AAT------ATATCA-A-AC-AT
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                23409  4 +     68503 ----------------A-AC-A-
i Rangifer_tarandus.RanTarSib_scaffold_24239            I 4 C 0
s Rattus_norvegicus.chr11                                13921300 14 +  90463843 GAT------ACATGC-A-GC-AT
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1796216 14 +   2252614 GAT------AAATTA-A-AC-AT
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                            3853 14 -     17045 AAT------ATATCA-A-AC-AT
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206381340 14 - 206558726 AAT------ATATCA-A-AC-AT
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44860243 14 -  45163003 AAT------ATATCA-A-AC-AT
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                23318 14 +    109198 GAT------AGATTA-A-AT-AT
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                      4293  4 -      4338 ----------------A-AC-A-
i Saiga_tatarica.SaiTat_scaffold_371890                 I 4 C 0
s Saimiri_boliviensis.NW_024100938.1                     15678283 14 -  43202129 AAT------ATATTA-A-AC-AT
i Saimiri_boliviensis.NW_024100938.1                    C 0 I 6
s Saimiri_cassiquiarensis.k141_808270                       10197 14 +     34089 AAT------ATATTA-A-AC-AT
i Saimiri_cassiquiarensis.k141_808270                   C 0 I 6
s Saimiri_macrodon.k141_2087127                             10136 14 -     60842 AAT------ATATTA-A-AC-AT
i Saimiri_macrodon.k141_2087127                         C 0 I 6
s Saimiri_oerstedii.k141_841116                             10230 14 +     67014 AAT------ATATTA-A-AC-AT
i Saimiri_oerstedii.k141_841116                         C 0 I 6
s Saimiri_sciureus.k141_1947592                             10207 14 +     60816 AAT------ATATTA-A-AC-AT
i Saimiri_sciureus.k141_1947592                         C 0 I 6
s Saimiri_ustus.k141_1282476                                10144 14 -     76454 AAT------ATATTA-A-AC-AT
i Saimiri_ustus.k141_1282476                            C 0 I 6
s Sapajus_apella.ctg10                                   17346916 14 -  30362882 AAT------ATATTA-A-AC-AT
i Sapajus_apella.ctg10                                  C 0 I 6
s Sapajus_macrocephalus.k141_966464                         26237 14 -     62485 AAT------ATATTA-A-AC-AT
i Sapajus_macrocephalus.k141_966464                     C 0 I 6
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   42151 13 -    114521 GGA-------AATTA-G-AC-AC
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        7089 14 +     15331 AAT------ATATCA-A-AC-AT
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      12464 14 +     20762 AAT------ATATCA-A-AC-AT
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         122470 14 +    130994 AAT------ATATCA-A-AC-AT
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           41248 14 +     46263 AAT------ATATCA-A-AC-AT
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     34393 14 +     42640 AAT------ATATCA-A-AC-AT
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        17415 14 +     30600 AAT------ATATCA-A-AC-AT
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  107497 14 -    120886 GAT------ACATGC-A-AC-AT
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            26800 14 +    739146 GAA------ATATTA-T-AC-AT
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17777131 13 -  27805282 TAA-------AATTA-T-AC-TT
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2245804 14 +   2842873 GAT------AAATTA-A-AC-AG
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             241638 13 -    276980 GGT------GAATTA-A-AC-A-
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            35832 14 +     62062 GGT------GAATTA-A-AT-AT
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189278055 14 + 218635234 aat------aaatta-a-ac-at
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                5292 14 +     20549 TAT------AAATTA-A-AC-AT
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               19081 14 +     45698 GAT------AAAGTA-A-AC-AC
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      813429 14 +   1148477 GAT------ATAGTA-A-AC-AC
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  64065 14 +     99546 GAT------ATATTA-A-AC-AC
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               32934 20 +     42269 tatttgataaaattc-a-ac-at
i Tarsius_lariang.k141_609102                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194013714 14 - 194193292 AAT------ATATTA-A-AC-AT
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             40947 14 -     47444 GAC------AAATTA-A-AC-AT
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                  2209  9 -      3104 GAA------AAATTA--------
i Tolypeutes_matacus.TolMat_scaffold_475685             C 0 I 1
s Tonatia_saurophila.TonSau_scaffold_3334                  141014 14 -    259118 GGT------GAATTA-A-AC-AT
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        30736 14 +     38948 AAT------ATATCA-A-AC-AT
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   24296 14 -     32910 AAT------ATATCA-A-AC-AT
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      6197 14 -     12939 AAT------ATATCA-A-AC-AT
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       5625 14 -     14244 AAT------ATATCA-A-AC-AT
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           47018 14 -     54611 AAT------ATATCA-A-AC-AT
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        4819 14 -     11566 AAT------ATATCA-A-AC-AT
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     7003 14 -     15592 AAT------ATATCA-A-AC-AT
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          5655 14 +     14371 AAT------ATATCA-A-AC-AT
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   3941 14 +     12481 AAT------ATATCA-A-AC-AT
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        3922 14 -     24393 AAT------ATATCA-A-AC-AT
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       9066 14 -     28054 AAT------ATATCA-A-AC-AT
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44663850 14 -  44834318 AAT------ATATCA-A-AC-AT
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       6162 14 +     13828 AAT------ATATCA-A-AC-AT
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                  11908  5 +     90398 ----------------A-AC-AT
i Tragulus_javanicus.TraJav_scaffold_14717              I 4 C 0
s Trichechus_manatus.JH594618.1                          16092138 14 +  31416278 GAT------AAGTTA-A-AC-AT
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2802849  6 -   3938065 --------------A-A-AC-AC
i Tupaia_chinensis.KB320831.1                           I 3 C 0
s Tupaia_tana.TupTan_flattened_line_68454                   11673  6 +     13056 --------------A-A-AC-AC
i Tupaia_tana.TupTan_flattened_line_68454               I 3 C 0
s Tursiops_truncatus.MRVK01000923.1                      69319789  6 -  96451834 ----------------a-acaat
i Tursiops_truncatus.MRVK01000923.1                     I 4 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                    2489 13 +    136657 GAT-------AAATA-T-AC-AT
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 C 0
s Ursus_maritimus.KK498671.1                              6523282 14 +  28682327 GGT------GAATTA-A-AC-AT
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                 11199 14 -     20643 GAT------AAATTA-A-AC-AT
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             30734 14 -     33872 GAT------AAATTA-A-AC-AT
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1530817 14 -   2331223 aat------aaatta-a-ac-at
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                146957 14 -    281493 GGT------GAATTA-A-AT-AC
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       133299 14 -    134049 GAT------AAATTA-A-AC-AT
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        222379 14 -    227762 GGT------GAATTA-A-AC-AT
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_202118                     2899 14 -      3360 GAT------AAATTA-A-AT-AC
i Zapus_hudsonius.ZapHud_scaffold_202118                C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            4382  6 -     13665 ----------------A-ACAAT
i Ziphius_cavirostris.ZipCav_flattened_line_60625       I 4 C 0
e Perognathus_longimembris.PerPac_flattened_line_19359       3994  0 +     49596 C
e Dipodomys_stephensi.DipSte_scaffold_84338                  4348  0 -     11986 C
e Dipodomys_ordii.KN672545.1                              3661994  0 +   4240102 C
e Noctilio_leporinus.NocLep_scaffold_12062                  53142 337 +     94413 I
e Murina_feae.MurFea_scaffold_2254                          26669 255 -    100666 I
e Miniopterus_schreibersii.MinSch_scaffold_24116            40144 474 +     45743 I
e Miniopterus_natalensis.LDJU01000022.1                   8215685 474 +  10048721 I
e Elephantulus_edwardii.JH947210.1                        7837010 301 +  15467074 I
e Glis_glis.GliGli_scaffold_79770                           18213 58 -     18683 I
e Hylobates_pileatus_a.tarseq_592                             37267 2881 -     60944 I
e Propithecus_coquerelli.NW_012147997.1                    674065 544 -   2312742 I
e Muscardinus_avellanarius.MusAve_scaffold_9643             17160  2 +     98495 I
e Graphiurus_murinus.GraMur_scaffold_4493                   81514  0 +    118900 C
e Symphalangus_syndactylus.tarseq_24                        20205  0 -  13920577 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               19309 18 +    209709 GGGGTAT---TAA-------AA--TA--ACTT
s Acinonyx_jubatus.LLWD01000356.1                         2042166 17 +   3721120 CTAG-AT---GGA-------AA--GA--ATTC
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    119824 17 -    189883 GTCA-AT---TGA-------GA--AA--TTTT
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10666029 17 +  23371972 GTGG-AT---TGA-------AA--GA--ATTC
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7102981 16 -  16596857 -tgg-at---tga-------aa--ga--attc
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_67806                    7030 24 +     22864 GTGA-CT---TGTGAACTGAAA--GA--ATTT
i Allactaga_bullata.AllBul_scaffold_67806               I 14 I 5
s Allenopithecus_nigroviridis.k141_2469532                   7206 17 -     60446 GGGG-GT---TAA-------AA--TA--ACTT
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         7920 17 -     29318 GGGG-AT---TAA-------AA--TA--ACTT
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         6858 17 +     38766 GGGG-AT---TAA-------AA--TA--ACTT
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          7816 17 -     80423 GGGG-AT---TAA-------AA--TA--ACTT
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              2764  6 +     19852 ------------------------TA--ATTT
i Alouatta_belzebul.k141_276091                         I 6 C 0
s Alouatta_caraya.k141_664908                                4980  6 -     12443 ------------------------TA--ATTT
i Alouatta_caraya.k141_664908                           I 6 C 0
s Alouatta_discolor.k141_2023149                             2307  6 +      5070 ------------------------TA--ATTT
i Alouatta_discolor.k141_2023149                        I 6 C 0
s Alouatta_juara.k141_1458234                                  78  6 +     11617 ------------------------TA--ATTT
i Alouatta_juara.k141_1458234                           I 6 C 0
s Alouatta_macconnelli.k141_2318944                          4789  6 -     24210 ------------------------TA--ATTT
i Alouatta_macconnelli.k141_2318944                     I 6 C 0
s Alouatta_nigerrima.k141_494922                             1293  6 -      8325 ------------------------TA--ATTT
i Alouatta_nigerrima.k141_494922                        I 6 C 0
s Alouatta_palliata.k141_405616                              7188  6 +     16794 ------------------------TA--ATTT
i Alouatta_palliata.k141_405616                         I 6 C 0
s Alouatta_puruensis.k141_347198                             1240  6 +      9111 ------------------------TA--ATTT
i Alouatta_puruensis.k141_347198                        I 6 C 0
s Alouatta_seniculus.k141_790278                             6488  6 -      9835 ------------------------TA--ATTT
i Alouatta_seniculus.k141_790278                        I 6 C 0
s Ammotragus_lervia.NIVO01013474.1                        3529184 18 +   4113121 -TAG-AT---TGA-------TAA--AACATTC
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      395847 17 -    631301 GTCA-AT---GGA-------AA--GA--ATTT
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             6596 18 +     55446 -TAG-AT---TGA-------TAA--AACATTC
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 68094  6 +     78111 ------------------------TA--ATTT
i Aotus_azarae.k141_3170768                             I 6 C 0
s Aotus_griseimembra.k141_3275623                           11035  6 +     22701 ------------------------TA--ATTT
i Aotus_griseimembra.k141_3275623                       I 6 C 0
s Aotus_nancymaae.KZ196176.1                              5755004  6 +   9889416 ------------------------TA--ATTT
i Aotus_nancymaae.KZ196176.1                            I 6 C 0
s Aotus_trivirgatus.k141_1740727                            11583  6 -    104377 ------------------------TA--ATTT
i Aotus_trivirgatus.k141_1740727                        I 6 C 0
s Aotus_vociferans.k141_718647                              11612  6 +     23246 ------------------------TA--ATTT
i Aotus_vociferans.k141_718647                          I 6 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     4232 17 +     11424 GCAA-GT---TGA-------GA--GA--ATGT
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        8183 16 +      9265 GTAG-AT----GA-------AA--GA--ATTT
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                13929 17 -     29036 GTCA-AT---GGA-------AA--GA--ATTT
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9544898  6 +  39197703 ------------------------TA--ATTT
i Ateles_geoffroyi_b.tarseq_2582                           I 6 C 0
s Ateles_belzebuth.k141_1348307                             66172  6 +     85812 ------------------------TA--ATTT
i Ateles_belzebuth.k141_1348307                         I 6 C 0
s Ateles_chamek.k141_1072810                                17182  6 +     89302 ------------------------TA--ATTT
i Ateles_chamek.k141_1072810                            I 6 C 0
s Ateles_geoffroyi_a.k141_1300742                             21686  6 -     58268 ------------------------TA--ATTT
i Ateles_geoffroyi_a.k141_1300742                         I 6 C 0
s Ateles_marginatus.k141_899112                             69680  6 +    119057 ------------------------TA--ATTT
i Ateles_marginatus.k141_899112                         I 6 C 0
s Ateles_paniscus.k141_1631200                              11649  6 -     25888 ------------------------TA--ATTT
i Ateles_paniscus.k141_1631200                          I 6 C 0
s Avahi_laniger.k141_2840928                                12740 17 -     16375 GTAG-AT---TGA-------AA--GA--ATTT
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_1363236                                32 17 +     13465 GTAG-AT---TGA-------AA--GA--ATTT
i Avahi_peyrierasi.k141_1363236                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26394512 19 +  51448160 gtag-AT---TGA-------AAA--AACTTTC
i Balaenoptera_acutorostrata.KI537095.1                 I 7891 C 0
s Balaenoptera_bonaerensis.DF502048.1                       11795 19 -     13118 gtag-aT---TGA-------AAA--AACTTTC
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   51382 18 -     72089 -TAG-AT---TGA-------TAA--AACGTTC
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Cacajao_ayresi.k141_724503                               119512  6 -    171031 ------------------------TA--ATTT
i Cacajao_ayresi.k141_724503                            I 6 C 0
s Cacajao_calvus.k141_96166                                 18532  6 +    125063 ------------------------TA--ATTT
i Cacajao_calvus.k141_96166                             I 6 C 0
s Cacajao_hosomi.k141_303789                                20579  6 -    216513 ------------------------TA--ATTT
i Cacajao_hosomi.k141_303789                            I 6 C 0
s Cacajao_melanocephalus.k141_1160263                       13122  6 -    134917 ------------------------TA--ATTT
i Cacajao_melanocephalus.k141_1160263                   I 6 C 0
s Bison_bison.KN264915.1                                   306109 10 -   6870073 -TAG-AT---TGA-------TA----------
i Bison_bison.KN264915.1                                C 0 I 1
s Bos_indicus.CM003021.1                                 22960215 10 + 161108492 -TAG-AT---TGA-------TA----------
i Bos_indicus.CM003021.1                                C 0 I 1
s Bos_mutus.JH883513.1                                     422394 10 +    998990 -TAG-AT---TGA-------TA----------
i Bos_mutus.JH883513.1                                  C 0 I 1
s Bos_taurus.CM000177.6                                  22668867 10 + 158972876 -TAG-AT---TGA-------TA----------
i Bos_taurus.CM000177.6                                 C 0 I 1
s Bubalus_bubalis.KI419065.1                               677717 10 +   1914593 -CAG-AT---TGA-------TA----------
i Bubalus_bubalis.KI419065.1                            C 0 I 1
s Camelus_bactrianus.KN276303.1                           3225723 19 -   8989139 gtaG-AT---TGA-------AA--AAACTTTC
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           403423 19 -  15254737 gtaG-AT---TGA-------AA--AAACTTTC
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2979161 19 +   6889770 gtaG-AT---TGA-------AA--AAACTTTC
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11528885 17 +  39901454 ATGG-AT---TGA-------AA--TA--ATTC
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   23859 17 +     87036 ATGG-AT---TGA-------AA--TA--ATTC
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11275782 17 -  35597290 ATGG-AT---TGA-------AA--TA--ATTC
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11098280 17 +  39895921 ATGG-AT---TGA-------AA--TA--ATTC
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16465064 17 -  44759192 ATGG-AT---TGA-------AA--TA--ATTC
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21336618 18 + 157394656 -TAG-AT---TGA-------TAA--AACATTC
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135714971 18 - 157403528 -TAG-AT---TGA-------TAA--AACATTC
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          315094 20 +    345090 ccaa-atagctaa-------aa--ca--atca
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               64904 17 +     67245 GTCA-AT---GGA-------AA--GA--ATTT
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_1326                     1734 17 -    202837 ATGG-AT---TGA-------GA--GA--ATTT
i Castor_canadensis.CasCan_scaffold_1326                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   165684 20 -    276539 GTAA-AT---TGA-------AAA-CAACTTTC
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15791965 17 -  24422027 GTGA-AT---TGA-------AA--GA--ATTT
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15803910 17 -  24440124 GTGA-AT---TGA-------AA--GA--ATTT
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       182082 17 +    436027 GTGA-AT---TGA-------AA--GA--ATTT
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18897248  6 -  29618158 ------------------------TA--ATTT
i Cebus_albifrons.Contig22                              I 6 C 0
s Cebus_olivaceus.k141_93739                                13898  6 -     26817 ------------------------TA--ATTT
i Cebus_olivaceus.k141_93739                            I 6 C 0
s Cebus_unicolor.k141_239009                                18141  6 +     25043 ------------------------TA--ATTT
i Cebus_unicolor.k141_239009                            I 6 C 0
s Cephalopachus_bancanus.k141_702587                        14131 20 +     21754 ccaa-atagctaa-------aa--ca--atca
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4370713 17 +   7569818 gtag-at---GGA-------AA--GA--ATTC
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_171732          870 17 +      8380 GTAG-AT---GGA-------AA--GA--ATTC
i Ceratotherium_simum_cottoni.CerCot_scaffold_171732    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6561145 17 +   6739814 GGGG-AT---TAA-------AA--TA--ACTT
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      32622 17 +     60454 GGGG-AT---TAA-------AA--TA--ACTT
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          7826 17 -     21101 GGGG-AT---TAA-------AA--TA--ACTT
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         65136 17 -    107033 GGGG-AT---TAA-------AA--TA--ACTT
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        7997 17 -     17608 GGGG-AT---TAA-------AA--TA--ACTT
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          5165 17 +     45019 GGGG-AT---TAA-------AA--TA--ACTT
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           5433 17 +     15177 GGGG-AT---TAA-------AA--TA--ACTT
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          8047 17 +     16677 GGGG-AT---TAA-------GA--TA--ACTT
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           30235 17 +     35983 GGGG-AT---TAA-------AA--TA--ACTT
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11996768 17 +  12117833 GGGG-AT---TAA-------AA--TA--ACTT
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46483750 17 +  46592721 GGGG-AT---TAA-------AA--TA--ACTT
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                       1853 17 -     27215 GGGG-AT---TAA-------AA--TA--ACTT
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       8061 17 +     35577 GGGG-AT---TAA-------AA--TA--ACTT
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        7855 17 -     25661 GGGG-AT---TAA-------AA--TA--ACTT
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        8019 17 -     17744 GGGG-AT---TAA-------AA--TA--ACTT
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        27388 17 +     37128 GGGG-AT---TAA-------AA--TA--ACTT
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           6373 17 -      6963 GTGG-AT---TGA-------AG--GA--ATTT
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           64956 17 -     68416 GTAG-AT---TGA-------AA--GA--ATTT
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_854352                            1257 17 +     27737 GTAG-AT---TGA-------AA--GA--ATTT
i Cheirogaleus_medius.k141_854352                       C 0 C 0
s Cheracebus_lucifer.k141_619653                            11206  6 -     18223 ------------------------TA--ATTT
i Cheracebus_lucifer.k141_619653                        I 6 C 0
s Cheracebus_lugens.k141_996499                              2947  6 +    188999 ------------------------TA--ATTT
i Cheracebus_lugens.k141_996499                         I 6 C 0
s Cheracebus_regulus.k141_2128895                           47246  6 +     57117 ------------------------TA--ATTT
i Cheracebus_regulus.k141_2128895                       I 6 C 0
s Cheracebus_torquatus.k141_315545                          51926  6 +     54541 ------------------------TA--ATTT
i Cheracebus_torquatus.k141_315545                      I 6 C 0
s Chinchilla_lanigera.JH721867.1                         15966668 17 +  43084221 GTGA-AT---TGA-------GA--GA--ATTT
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         76727  6 +    196370 ------------------------TA--ATTT
i Chiropotes_israelita.k141_1189915                     I 10 C 0
s Chiropotes_sagulatus.k141_773804                          20908  6 +     40510 ------------------------TA--ATTT
i Chiropotes_sagulatus.k141_773804                      I 10 C 0
s Chlorocebus_aethiops.ctg22                             15145581 17 -  15256731 GGGG-AT---TAA-------AA--TA--ACTT
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      40045 17 -     53260 GGGG-AT---TAA-------AA--TA--ACTT
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101150604 17 + 101219884 GGGG-AT---TAA-------AA--TA--ACTT
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                20401 17 -     21363 CTGG-AT---TGA-------AA--GA--ATTT
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           765705 17 +    964067 CTGG-AT---TGA-------AG--GA--ATTT
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_304221              6198 17 -      7053 GTTA-TT---TAA-------AG--AC--AGTT
i Chrysochloris_asiatica.ChrAsi_scaffold_304221         C 0 C 0
s Colobus_angolensis.KN985967.1                          10890374 17 +  10971483 GGGG-AT---TAA-------AA--TA--ACTT
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147668302 17 + 156195979 GGGG-AT---TAA-------AA--TA--ACTT
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            20285 17 +     23629 GGGG-AT---TAA-------AA--TA--ACTT
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60624697 17 +  78930452 GTGG-AT---TGA-------AA--CA--ATTT
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_144252         5581 17 -      5782 GTGG-CT---TGA-------AA--AT--ATTT
i Craseonycteris_thonglongyai.CraTho_scaffold_144252    C 0 N 0
s Cricetomys_gambianus.CriGam_scaffold_949                 284728 17 -    399297 GTCA-AT---TGA-------GA--GA--ATAT
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53037014 17 +  72327488 GCCA-AA---TGA-------GA--GA--ATTT
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              4568 16 -     22648 GCAC-AT---TGA-------AA--GA---TTT
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            60098 17 -     70449 GTAG-AT---TGA-------AA--GA--ATTC
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  216863 17 -    956709 GTGA-AT---TGA-------GA--AG--TTGT
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 38476 17 -     67205 ATGA-GC---TGA-------GT--GA--AATT
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                23204 17 +     26546 GCGA-AT---TGA-------GA--GA--ATTT
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             64331 17 -    236241 GTGA-AT---TGA-------GA--GA--ATTT
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          187436 17 -   6883506 aaGG-AT---TGA-------AG--GA--ATTT
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16850896 17 +  31942871 GTAG-AT---TGA-------AA--GA--ATTT
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80043207 19 -  96802777 gtag-aT---TGA-------AAA--AACTTCC
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18704125 17 -  18957592 GTCA-AG---GGA-------AA--GA--ATTT
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 329112 17 +    993696 gtag-at---GGA-------AA--GA--ATTC
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   9746 17 +    151128 GTAG-AT---GGA-------AA--GA--ATTC
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   162276 17 +    228994 GTGA-AT---TGA-------GA--GA--ATTT
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                42907 15 -     73477 ATGA-GC---TA---------A--GA--AATT
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           23007362 17 -  44670279 GTAG-AT---TAA-------AG--AA--ACTT
i Echinops_telfairi.JH980316.1                          I 2 C 0
s Eidolon_helvum.KE772537.1                                 16323 17 +     24177 GTGG-TT---TGA-------AA--GA--ATTT
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1499179 18 +   1727528 -TAG-AT---TGA-------TAA--AACATGC
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        245716 17 -    369425 GACA-AA---TGG-------GA--GA--ATTT
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01076532.1                           2067 17 +      9159 GAAA-AA---TGG-------GA--GA--ATTT
i Ellobius_talpinus.LOJH01076532.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85880047 16 +  99434291 -TGG-AT---TTA-------AA--GA--ATTC
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4711902 17 +   6522550 GCCG-AT---TGA-------AA--GC--ATTT
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5858972 17 -   7175178 GTAG-AT---TGA-------AA--GA--ATTC
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13357458 17 +  41866177 GTAG-at---tga-------aa--ga--attt
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          18948 17 +     92910 GTAG-AT---TGA-------AA--GA--ATTT
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11544432 18 +  16010500 GTTA-AC---TGA-------AAA-GA--ATTT
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48782614 17 -  48907691 GGGG-AT---TAA-------AA--TA--ACTT
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          321466 19 +    330699 GTAG-AT---TGA-------AAA--AACTTTC
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             67918 19 +     89355 GTAG-AT---TGA-------AAA--AACTTTC
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                             11022 17 +     13586 GTAG-AT---TAA-------AA--GA--ATTT
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_419870                                130 17 +      2668 GTAG-AT---TAA-------AA--GA--ATTT
i Eulemur_collaris.k141_419870                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            17418 17 +     36558 GTAG-AT---TAA-------AA--GA--ATTT
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            13740 17 +     60246 GTAG-AT---TAA-------AA--GA--ATTT
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                17225 17 +    109717 GTAG-AT---TAA-------AA--TA--ATTT
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 5208 17 -     19505 GTAG-AT---TAA-------AA--GA--ATTT
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                21883 17 +     27497 GTAG-AT---TAA-------AA--GA--ATTT
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           24333 17 +     26808 GTAG-AT---TAA-------AA--GA--ATTT
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                39071 17 +     46535 GTAG-AT---TAA-------AA--GA--ATTT
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              21812 17 -     29447 GTAG-AT---TAA-------AA--GA--ATTT
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129901741 17 - 159252932 CTAG-AT---GGA-------AA--GA--ATTA
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129288718 17 - 158578461 CTAG-AT---GGA-------AA--GA--ATTA
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 29908 17 +     52776 CTAG-AT---GGA-------AA--GA--ATTA
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13899760 17 -  19261668 GTGA-AT---TGA-------GA--GA--ATTT
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     217057 16 -    847004 GTAG-AT----GA-------AA--GA--ATTT
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           19419 16 -     43889 GTAG-AT----GA-------AA--GA--ATTT
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          16560 16 +     27357 GTAG-AT----GA-------AA--GA--ATTT
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               161335 17 +    324696 GTAG-AT---TAA-------AA--TA--ATTT
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    188907 18 -    189561 -aaa-ac---tga-------taA--AACATTC
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           18271  8 -     18683 --------------------GA--GA--ATTT
i Glis_glis.GliGli_scaffold_79770                       I 58 C 0
s Gorilla_beringei.k141_111300                              11015 17 -     14630 AGGG-AT---TAA-------AA--TA--ACTT
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119658115 17 - 195582420 AGGG-AT---TAA-------AA--TA--ACTT
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         7814 17 +     10286 GTAG-AT---TAA-------AA--GA--ATTT
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             6295 17 -     11661 GTAG-AT---TAA-------AA--GA--ATTT
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                            11619 17 +     56096 GTAG-AT---TAA-------AA--GA--ATTT
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        34868 17 -     42470 GTAG-AT---TAA-------AA--GA--ATTT
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        51494 17 -     54384 GTAG-AT---TAA-------AA--GA--ATTT
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              25216 17 +     53719 GTAG-AT---TGA-------AA--GA--ATTC
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                35998 18 -     91191 -TAG-AT---TGA-------TAA--AACATTC
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2563927 17 +  31725842 GTGA-AT---TCA-------GA--GA--TTTT
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               65507 17 +     73687 GAAG-TT---TAT-------AG--AA--ATTT
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              153288 19 +    277961 GTGG-AT---TGA-------AAA--CACTTTC
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      287253 17 -    477199 GTGG-AT---TGA-------AA--GA--ATTT
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959               4527 17 +     26078 GTGG-AT---TGA-------AA--GA--ATTT
i Hipposideros_galeritus.HipGal_scaffold_52959          C 0 C 0
s Hoolock_leuconedys.ctg79                                     10934 17 -   7690867 GGGG-AT---TAA-------AA--TA--ACTT
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 25650 17 -     67322 GTAG-GT---CGA-------AA--GA--ATTC
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           23566 17 -    119109 ATGA-AT---TGA-------GA--GA--ATTT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_1048809                              103 17 -      6555 GGGG-AT---TAA-------AA--TA--ACTT
i Hylobates_abbotti.k141_1048809                        C 0 C 0
s Hylobates_agilis.k141_1136966                              1510 17 +      9785 GGGG-AT---TAA-------AA--TA--ACTT
i Hylobates_agilis.k141_1136966                         C 0 C 0
s Hylobates_klossii.k141_1069878                               50 17 +      2316 GGGG-AT---TAA-------AA--TA--ACTT
i Hylobates_klossii.k141_1069878                        C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14630336 17 -  25970782 GGGG-AT---TAA-------AA--TA--ACTT
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            2887 17 +      4161 GGGG-AT---TAA-------AA--TA--ACTT
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                    11851 17 +     22540 GTGA-AT---TGA-------GA--GA--ATTT
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7132117 17 +  13083262 GTGA-AT---TGA-------GA--GA--ATTT
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   3352 17 +      3484 GCAG-AT---TGA-------AA--GA--ATTT
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              15434 19 +     17520 GTAG-AT---TGA-------AAA--AACTTTC
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725511.1                              6852823 24 -  12829143 GTGG-AT---TGTGAACTGAAA--GA--ATTT
i Jaculus_jaculus.JH725511.1                            I 24 I 27
s Kogia_breviceps.KogBre_flattened_line_35920               30063 19 +     37189 GTAG-AT---TGA-------AAA--AACTTTC
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          55769  6 -    147782 ------------------------TA--ATTT
i Lagothrix_lagothricha.k141_12968                      I 6 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    9603 17 +     26176 GCCA-AA---TGA-------AA--GC--ATTT
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258413172 17 - 285822530 GTAG-AT---TAA-------AA--GA--ATTT
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        30491 17 +     39228 GTAG-AT---TGA-------AA--CA--ATTT
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            59857 17 +     63517 GTAG-AT---TGA-------AA--CA--ATTT
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        38238 17 -     38897 GTAG-AT---TGA-------AA--CA--ATTT
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      4283 17 -     13103 GTAG-AT---TGA-------AA--CA--ATTT
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3094489 17 -   3498232 GTGG-AT---TGA-------AA--GA--ATTC
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_470947                     504 17 -      1692 ATGG-AT---TGA-------AA--TA--ATTT
i Lepus_americanus.LepAme_scaffold_470947               C 0 C 0
s Lipotes_vexillifer.KE558548.1                            142356 19 +   3060487 gtag-aT---TGA-------AAA--CACTTTT
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19254234 17 +  19376315 GGGG-AT---TAA-------AA--TA--ACTT
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           17000 16 +     84689 GTAG-AT----GA-------AA--GA--ATTT
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3784733 16 +   6799190 GTAG-AT----GA-------AA--GA--ATTT
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20601073 17 -  62548349 GTAG-AT---TAA-------AG--AA--ATTT
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11097736 17 +  39895028 ATGG-AT---TGA-------AA--TA--ACTC
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             25983 17 +     74745 GGGG-AT---TAA-------AA--TA--ACTT
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12712446 17 +  12821369 GGGG-AT---TAA-------AA--TA--ACTT
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                5019 17 -     26467 GGGG-AT---TAA-------AA--TA--ACTT
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           52890 17 +     63263 GGGG-AT---TAA-------AA--TA--ACTT
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 5000 17 -     26361 GGGG-AT---TAA-------AA--TA--ACTT
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_2667654                                1304 17 -      5626 GGGG-AT---TAA-------AA--TA--ACTT
i Macaca_leonina.k141_2667654                           C 0 C 0
s Macaca_maura.k141_251854                                  51419 17 -     79256 GGGG-AT---TAA-------AA--TA--ACTT
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196041517 17 + 196197964 GGGG-AT---TAA-------AA--TA--ACTT
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11451687 17 +  11645122 GGGG-AT---TAA-------AA--TA--ACTT
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                  10373 17 -     46448 GGGG-AT---TAA-------AA--TA--ACTT
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                8035 17 -     13212 GGGG-AT---TAA-------AA--TA--ACTT
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 21716 17 -     55006 GGGG-AT---TAA-------AA--TA--ACTT
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43847139 17 +  43892939 GGGG-AT---TAA-------AA--TA--ACTT
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               23001 17 -     24607 GGGG-AT---TAA-------AA--TA--ACTT
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                              10370 17 -     27140 GGGG-AT---TAA-------AA--TA--ACTT
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                704921 17 +    802869 GTGT-TT---TGA-------AA--GA--ATTT
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43443403 17 -  43563597 GGGG-AT---TAA-------AA--TA--ACTT
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4456202 17 -   4543643 GGGG-AT---TAA-------AA--TA--ACTT
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            154726 17 +    252755 GTGG-AT---TGA-------AA--TA--ATTA
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             42325 17 +     58827 GTGG-AT---TGA-------AA--TA--ATTA
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36879983 17 +  64221397 GTGA-AT---TGA-------GA--GA--ATTT
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       68702 17 -    234502 GTGG-AT---GGA-------AA--GA--ATTT
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             9141 16 -     87323 -TGG-AT---TGA-------AA--GA--ATTC
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 3949 17 +    115071 GTCA-GC---TGA-------GA--AA--ATTT
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1053587 17 -  26018355 GTCA-AA---TAA-------GA--GA--ATTT
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    5025 19 -     12939 GTAG-AT---TGA-------AAA--AACTTTC
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16516212 17 +  47401472 GTAG-AT---TGA-------AA--GA--ATTT
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  47245 17 -     48017 GTAT-AC---TAA-------AG--GA--ACTT
i Microgale_talazaci.MicTal_scaffold_34660              I 2 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               27853 17 -     32043 GCCA-AT---GGA-------AA--GA--ATTT
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22826550 17 -  98408828 GACA-AA---TGG-------GA--GA--ATTT
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         7953 17 +     29742 GGGG-AT---TAA-------AA--TA--ACTT
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        19891 17 -    104932 GTGG-AT---TGA-------AA--GA--ATTC
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     6906 17 -     12809 GTAG-AT---TGA-------AA--GA--ATTT
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 152800 19 +    154973 GTAG-AT---TGA-------AAA--AACTTCC
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                166367 17 +    265003 GTCA-AT---GGA-------AA--GA--ATTT
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  9575 18 -     19904 -TAG-AT---TGA-------TAA--AACATTC
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  152942 17 -    168139 GTAG-AT---TGA-------AA--GA--ATTC
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Mus_caroli.LT608236.1                                  70773832 17 +  92629107 GTTA-GG---GGA-------GA--GA--ATTT
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75495893 17 +  98207768 GTTA-GG---GGA-------GA--GA--ATTT
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67562626 17 +  89017189 GTCA-GC---TGA-------GA--GA--ATTT
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74338597 17 +  97876770 GTTA-GG---GGA-------GA--GA--ATTT
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             17162  8 +     98495 --------------------GA--TA--ATTT
i Muscardinus_avellanarius.MusAve_scaffold_9643         I 2 C 0
s Mustela_putorius.JH417978.1                             4431236 16 -  28371801 -tgg-at---tga-------aa--ga--attc
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     98308 17 -    117718 AAGG-AT---TCA-------GT--GA--AATT
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               974229 17 +   8389877 GCCA-AT---TGA-------AA--GC--ATTT
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5025308 17 +   6462685 GCCA-AT---TGA-------AA--GC--ACTT
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3471729 17 -   3747815 GCCA-AT---TGA-------AA--GC--ATTT
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        16964 17 +     66751 GCCA-AT---TGA-------AA--GT--ATTT
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_12795               861 17 -     87886 GTGG-AT---TGA-------AT--GA--ATTT
i Myrmecophaga_tridactyla.MyrTri_scaffold_12795         C 0 I 4
s Nannospalax_galili.KL201303.1                            126301 17 +    362372 GGGA-AG---TGA-------GA--GA--GTTT
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                              12214 17 +     48152 GGGG-AT---TAA-------AA--TA--ACTT
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4493282 17 -  14209539 GTGG-AT---TGA-------AA--GA--ATTC
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3957391 19 -   4490290 gtag-aT---TGA-------AAA--AACTTTC
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Nomascus_annamensis.k141_881190                             321 17 -      2113 GGGG-AT---TAA-------AA--TA--AGTT
i Nomascus_annamensis.k141_881190                       C 0 C 0
s Nomascus_concolor.k141_256540                              8618 17 -      8966 GGGG-AT---TAA-------AA--TA--ACTT
i Nomascus_concolor.k141_256540                         C 0 C 0
s Nomascus_gabriellae.k141_202556                             380 17 -      1580 GGGG-AT---TAA-------AA--TA--ACTT
i Nomascus_gabriellae.k141_202556                       C 0 I 5
s Nomascus_siki_b.tarseq_453                             7871 17 +     12787 GGGG-AT---TAA-------AA--TA--ACTT
i Nomascus_siki_b.tarseq_453                        C 0 C 0
s Nomascus_siki_a.k141_421408                                  2473 17 +     16235 GGGG-AT---TAA-------AA--TA--ACTT
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                40613 17 +   3668941 ATGG-AT---TGA-------AA--GA--ACTC
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65573783 16 -  95554990 GTAG-AT----GA-------AA--GA--ATTT
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_6040852                            1419 16 +      1868 GTAG-AT----GA-------AA--GA--ATTT
i Nycticebus_coucang.k141_6040852                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65681965 16 +  89412551 GTAG-AT----GA-------AA--GA--ATTT
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            5001812 17 -  23139505 ATGG-TT---TAA-------GA--TA--ATTT
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3693452 17 +  10294119 AAGA-GT---TGA-------GT--GC--AATT
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             687532 17 -   3126709 GTGG-AT---TGA-------AA--GA--ATTC
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1086565 18 +   1425656 -TAG-AT---TGA-------TAA--AACATGC
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         44638 16 +     78940 ---G-AC---TGA-------TAA--AACATTC
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  132357 17 +    145789 GACA-AC---TTG-------GA--GA--ATTT
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  45289 17 +     62360 GTCA-AA---TGA-------GA--GA--ATTT
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7231065 19 -   7562323 gtag-aT---TGA-------AAA--AACTTTC
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_371885              2291 17 +      3658 GTAG-AT---TAG-------AG--AA--ATTT
i Orycteropus_afer.OryAfe_flattened_line_371885         C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141885776 17 + 163896628 ACGG-AT---TGA-------AA--TA--ATTT
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      317745 17 -    505867 ATGG-AT---TGA-------AA--GA--ACTC
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        6918 16 -     53940 GTAG-AT----GA-------AA--GA--ATTT
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18014883 16 -  38779656 GTAG-AT----GA-------AA--GA--ATTT
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134085780 18 - 275406953 -tag-aT---TGA-------TAA--AACATTC
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      87032 19 +    140051 -TAG-AT---TGA-------TAAA-AACATTC
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.KQ411703.1                                   20828 18 +     41252 GGGGtat---taa-------aa--ta--actt
i Pan_paniscus.KQ411703.1                               I 281 I 42
s Pan_troglodytes.NBAG03000771.1                           187245 18 +    210065 GGGGTAT---TAA-------AA--TA--ACTT
i Pan_troglodytes.NBAG03000771.1                        I 81 I 368
s Panthera_onca.PanOnc_flattened_line_1615                  42508 17 +    295523 CTAG-AT---GGA-------AA--GA--ATTC
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3646322 17 +  18214204 CTAG-AT---GGA-------AA--GA--ATTC
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5035959 17 -   6340057 CTAG-AT---GGA-------AA--GA--ATTC
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1074671 18 -   1292953 -taG-AT---TGA-------TAA--AACATTC
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188162195 17 - 188283584 GGGG-AT---TAA-------AA--TA--ACTT
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              5285 17 +     25005 GGGG-AT---TAA-------AA--TA--ACTT
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47519567 17 +  47705337 GGGG-AT---TAA-------AA--TA--ACTT
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 73560 17 -    104429 GGGG-AT---TAA-------AA--TA--ACTT
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   12090 17 +     14967 GGGG-AT---TAA-------AA--TA--ACTT
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_899489                                   760 17 -     13896 GGGG-AT---TAA-------AA--TA--ACTT
i Papio_ursinus.k141_899489                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    123974 17 -    135482 TTAG-AT---AGA-------AA--GA--ATTC
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          12572 16 -     23713 GTAG-AT----GA-------AA--GA--ATTT
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           13723 16 +     61070 GTAG-AT----GA-------AA--GA--ATTT
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Peromyscus_maniculatus.KI615458.1                       2841103 17 -   3366660 GTCA-AA---TGA-------GA--GA--ATTT
i Peromyscus_maniculatus.KI615458.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    19863 17 -     36578 GTGA-AC---TGA-------GA--GC--CTAT
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              5525 19 +      8220 GTAG-AT---TGA-------AAA--AACTTTC
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Piliocolobus_badius.k141_1987485                           5748 17 -      5908 GGGG-AT---TAA-------AA--TA--ACtt
i Piliocolobus_badius.k141_1987485                      C 0 N 0
s Piliocolobus_gordonorum.k141_1270531                       6367  4 -     17985 GGGG----------------------------
i Piliocolobus_gordonorum.k141_1270531                  C 0 N 0
s Piliocolobus_kirkii.k141_929665                            5734 17 +      7694 GGGG-AT---TAA-------AA--TA--ACtt
i Piliocolobus_kirkii.k141_929665                       C 0 I 306
s Piliocolobus_tephrosceles.PDMG02000036.1               26744217 17 +  26888534 GGgg-at---taa-------aa--ta--actt
i Piliocolobus_tephrosceles.PDMG02000036.1              C 0 I 304
s Pipistrellus_pipistrellus.PipPip_scaffold_3306           102450 17 +    112873 GCCA-AT---TGA-------AA--GC--ATTT
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             45920  6 -     61926 ------------------------TA--ATTT
i Pithecia_albicans.k141_991845                         I 6 C 0
s Pithecia_chrysocephala.k141_159118                        27296  6 +     78826 ------------------------TA--ATTT
i Pithecia_chrysocephala.k141_159118                    I 6 C 0
s Pithecia_hirsuta.k141_1152968                             11351  6 -     15800 ------------------------TA--ATTT
i Pithecia_hirsuta.k141_1152968                         I 6 C 0
s Pithecia_mittermeieri.k141_2119203                        14550  6 -     16101 ------------------------TA--ATTT
i Pithecia_mittermeieri.k141_2119203                    I 6 C 0
s Pithecia_pissinattii.k141_1102319                          7779  6 +      9673 ------------------------TA--ATTT
i Pithecia_pissinattii.k141_1102319                     I 6 C 0
s Pithecia_pithecia.tarseq_313                           13476772  6 -  19735023 ------------------------TA--ATTT
i Pithecia_pithecia.tarseq_313                          I 6 C 0
s Pithecia_vanzolinii.k141_831006                           15682  6 -     31692 ------------------------TA--ATTT
i Pithecia_vanzolinii.k141_831006                       I 6 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990          12033 19 +     21690 GTAG-AT---TAA-------AAA--AACTTTC
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       27858  6 +     44506 ------------------------TA--ATTT
i Plecturocebus_bernhardi.k141_959214                   I 6 C 0
s Plecturocebus_brunneus.k141_498086                        28071  6 +     67491 ------------------------TA--ATTT
i Plecturocebus_brunneus.k141_498086                    I 6 C 0
s Plecturocebus_caligatus.k141_2539816                      18310  6 -     98129 ------------------------TA--ATTT
i Plecturocebus_caligatus.k141_2539816                  I 6 C 0
s Plecturocebus_cinerascens.k141_744510                     27911  6 +    147771 ------------------------TA--ATTT
i Plecturocebus_cinerascens.k141_744510                 I 6 C 0
s Plecturocebus_cupreus.k141_1145860                         4546  6 -     43940 ------------------------TA--ATTT
i Plecturocebus_cupreus.k141_1145860                    I 6 C 0
s Plecturocebus_dubius.k141_3565563                          8629  6 -     55515 ------------------------TA--ATTT
i Plecturocebus_dubius.k141_3565563                     I 6 C 0
s Plecturocebus_grovesi.k141_242819                         27983  6 +    152463 ------------------------TA--ATTT
i Plecturocebus_grovesi.k141_242819                     I 6 C 0
s Plecturocebus_hoffmannsi.k141_985533                       5787  6 -    119457 ------------------------TA--ATTT
i Plecturocebus_hoffmannsi.k141_985533                  I 6 C 0
s Plecturocebus_miltoni.k141_841561                         17705  6 +    134592 ------------------------TA--ATTT
i Plecturocebus_miltoni.k141_841561                     I 6 C 0
s Plecturocebus_moloch.k141_890597                          28293  6 -     75465 ------------------------TA--ATTT
i Plecturocebus_moloch.k141_890597                      I 6 C 0
s Pongo_abelii.NDHI03003816.1                              192923 17 -    373494 AGGG-AT---TAA-------AA--TA--ACTT
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19813576 17 +  19899266 AGGG-AT---TAA-------AA--TA--ACTT
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               9496 17 -     15069 GGGG-AT---TAA-------AA--TA--ACTT
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              9611 17 +     14865 GGGG-AT---TAA-------AA--TA--ACTT
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                6614 17 -      9567 GAAG-TT---TAT-------AG--AA--ATTT
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6854548 17 +  12164890 GTAG-AT---TAA-------AA--GA--ATTT
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coronatus.k141_1353159                         9646 17 +     11805 GTAG-AT---TGA-------AA--GA--ATTT
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           48976 17 +     52369 GTAG-AT---TGA-------AA--GA--ATTT
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         41363 17 -     44753 GTAG-AT---TGA-------AA--GA--ATTT
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            23286 17 +     27322 GTAG-AT---TGA-------AA--GA--ATTT
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       22938 17 -     53241 GTAG-AT---TGA-------AA--GA--ATTT
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         45201 17 -     48185 GTAG-AT---TGA-------AA--GA--ATTT
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           40919 17 +     77221 gtca-gc---tga-------ga--aa--atgt
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            9045 17 -     27784 gtca-gt---gga-------aa--ga--attt
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        252887 16 -    344369 -TGG-AT---TGA-------AA--GA--ATTC
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13250127 17 -  17261082 GTGG-TT---TGA-------AA--GA--ATTT
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.ABRP02213537.1                            389 17 -      2094 GTGG-TT---TGA-------AA--GA--ATTT
i Pteropus_vampyrus.ABRP02213537.1                      C 0 C 0
s Puma_concolor.QAVW01000427.1                          131542649 17 - 161321710 CTAG-AT---GGA-------AA--GA--ATTC
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             33602 17 +     56732 GGGG-AT---TAA-------AA--TA--ACTT
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6810099 17 +   6970761 GGGG-AT---TAA-------AA--TA--ACTT
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             9488 17 +     18040 GGGG-AT---TAA-------AA--TA--ACTT
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                23413 18 +     68503 -TAG-AT---TGA-------TAA--AACATGC
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13921314 17 +  90463843 GTCA-GT---TGA-------GA--GA--ATTT
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1796230 17 +   2252614 GTGg-at---tga-------aa--ta--attt
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                            3867 17 -     17045 GGGG-AT---TAA-------AA--TA--ACTT
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206381354 17 - 206558726 GGGG-AT---TAA-------AA--TA--ACTT
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44860257 17 -  45163003 GGGG-AT---TAA-------AA--TA--ACTT
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                23332 17 +    109198 GTGG-TT---TGG-------AA--GA--ATTT
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                      4297 18 -      4338 -TAG-AT---TGA-------TGA--AACATTC
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15678303  6 -  43202129 ------------------------TA--ATTT
i Saimiri_boliviensis.NW_024100938.1                    I 6 C 0
s Saimiri_cassiquiarensis.k141_808270                       10217  6 +     34089 ------------------------TA--ATTT
i Saimiri_cassiquiarensis.k141_808270                   I 6 C 0
s Saimiri_macrodon.k141_2087127                             10156  6 -     60842 ------------------------TA--ATTT
i Saimiri_macrodon.k141_2087127                         I 6 C 0
s Saimiri_oerstedii.k141_841116                             10250  6 +     67014 ------------------------TA--ATTT
i Saimiri_oerstedii.k141_841116                         I 6 C 0
s Saimiri_sciureus.k141_1947592                             10227  6 +     60816 ------------------------TA--ATTT
i Saimiri_sciureus.k141_1947592                         I 6 C 0
s Saimiri_ustus.k141_1282476                                10164  6 -     76454 ------------------------TA--ATTT
i Saimiri_ustus.k141_1282476                            I 6 C 0
s Sapajus_apella.ctg10                                   17346936  6 -  30362882 ------------------------TA--ATTT
i Sapajus_apella.ctg10                                  I 6 C 0
s Sapajus_macrocephalus.k141_966464                         26257  6 -     62485 ------------------------TA--ATTT
i Sapajus_macrocephalus.k141_966464                     I 6 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   42164 17 -    114521 ATGG-AT---TAA-------AA--GA--AATT
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        7103 17 +     15331 GGGG-AT---TAA-------AA--TA--ACTT
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      12478 17 +     20762 GGGG-AT---TAA-------AA--TA--ACTT
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         122484 17 +    130994 GGGG-AT---TAA-------AA--TA--ACTT
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           41262 17 +     46263 GGGG-AT---TAA-------AA--TA--ACTT
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     34407 17 +     42640 GGGG-AT---TAA-------AA--TA--ACTT
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        17429 17 +     30600 GGGG-AT---TAA-------AA--TA--ACTT
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  107511 17 -    120886 GTCA-AA---TGA-------GA--GA--ATTT
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            26814 17 +    739146 GTAG-AT---TGA-------AA--GA--ATTT
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17777144 13 -  27805282 GTGC-AA---TAA-------AA--A------T
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2245818 17 +   2842873 GTGA-AT---TAA-------GA--GA--ATTT
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             241651 16 -    276980 -TGG-AT---TGA-------AA--GA--ATTC
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            35846 17 +     62062 GTAG-AT---TGA-------AA--GA--ATTC
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189278069 20 + 218635234 gcaa-ac---tta-------aa-aaaattttc
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                5306 17 +     20549 GCTG-AT---TGA-------AA--GA--ATTT
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               19095 17 +     45698 ATGG-AT---TGA-------AC--AA--ATTT
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 C 0
s Tapirus_indicus.TapInd_scaffold_176                      813443 17 +   1148477 ATAG-AT---GGA-------AA--GA--ATTT
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  64079 17 +     99546 ACAG-AT---GGA-------AA--GA--GTTT
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               32954 20 +     42269 ccaa-atagctaa-------aa--ca--atcc
i Tarsius_lariang.k141_609102                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194013728 17 - 194193292 GGGG-AT---TAA-------AA--TA--ACTT
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             40961 17 -     47444 GTGA-AA---TGA-------GA--GA--CTAT
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                  2219 17 -      3104 GTGG-AT---TGA-------AG--GA--ATTT
i Tolypeutes_matacus.TolMat_scaffold_475685             I 1 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  141028 17 -    259118 GTCA-AT---GGA-------AA--AA--ATTT
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        30750 17 +     38948 GGGG-AT---TAA-------AA--TA--ACTT
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   24310 17 -     32910 GGGG-AT---TAA-------AA--TA--ACTT
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      6211 17 -     12939 GGGG-AT---TAA-------AA--TA--ACTT
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       5639 17 -     14244 GGGG-AT---TAA-------AA--TA--ACTT
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           47032 17 -     54611 GGGG-AT---TAA-------AA--TA--ACTT
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        4833 17 -     11566 GGGG-AT---TAA-------AA--TA--ACTT
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     7017 17 -     15592 GGGG-AT---TAA-------AA--TA--ACTT
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          5669 17 +     14371 GGGG-AT---TAA-------AA--TA--ACTT
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   3955 17 +     12481 GGGG-AT---TAA-------AA--TA--ACTT
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        3936 17 -     24393 GGGG-AT---TAA-------AA--TA--ACTT
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       9080 17 -     28054 GGGG-AT---TAA-------AA--TA--ACTT
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44663864 17 -  44834318 GGGG-AT---TAA-------AA--TA--ACTT
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       6176 17 +     13828 GGGG-AT---TAA-------AA--TA--ACTT
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                  11913 19 +     90398 GTAG-AT---TAA-------TAA--AACTTTC
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16092152 16 +  31416278 GTAG-AT---TAA-------A---AA--ATTC
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2802855 17 -   3938065 ATGG-AT---TGA-------AA--TA--CTTT
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                   11679 17 +     13056 ATGG-AT---TGA-------AA--TA--CTTT
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69319795 19 -  96451834 gtag-aT---TGA-------AAA--AACTTTC
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                    2502 17 +    136657 GTGG-AT---TGA-------AA--GA--ATTT
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 C 0
s Ursus_maritimus.KK498671.1                              6523296 17 +  28682327 GTAG-AT---TGA-------AA--GA--ATTC
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                 11213 17 -     20643 GTAG-AT---TGA-------AA--GA--ATTT
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             30748 17 -     33872 GTAG-AT---TGA-------AA--GA--ATTT
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1530831 19 -   2331223 gtaG-AT---TGA-------AA--AAACTTTC
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                146971 17 -    281493 ATGG-AT---TGA-------AA--GA--ACTC
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       133313 17 -    134049 GTGA-AT---TGA-------GA--GA--ATTT
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        222393 17 -    227762 GTGG-AT---TGA-------AA--GA--ATTC
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_202118                     2913 24 -      3360 GTGA-AT---TATGAACTAAAG--GA--ATTC
i Zapus_hudsonius.ZapHud_scaffold_202118                C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            4388 19 -     13665 GTAG-AT---TGA-------AAA--AACTTTC
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Perognathus_longimembris.PerPac_flattened_line_19359       3994  0 +     49596 C
e Dipodomys_stephensi.DipSte_scaffold_84338                  4348  0 -     11986 C
e Dipodomys_ordii.KN672545.1                              3661994  0 +   4240102 C
e Noctilio_leporinus.NocLep_scaffold_12062                  53142 337 +     94413 I
e Murina_feae.MurFea_scaffold_2254                          26669 255 -    100666 I
e Miniopterus_schreibersii.MinSch_scaffold_24116            40144 474 +     45743 I
e Miniopterus_natalensis.LDJU01000022.1                   8215685 474 +  10048721 I
e Elephantulus_edwardii.JH947210.1                        7837010 301 +  15467074 I
e Hylobates_pileatus_a.tarseq_592                             37267 2881 -     60944 I
e Propithecus_coquerelli.NW_012147997.1                    674065 544 -   2312742 I
e Graphiurus_murinus.GraMur_scaffold_4493                   81514  0 +    118900 C
e Symphalangus_syndactylus.tarseq_24                        20205  0 -  13920577 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               19327 5 +    209709 TCAAG
s Acinonyx_jubatus.LLWD01000356.1                         2042183 3 +   3721120 --AAG
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    119841 5 -    189883 TCAAG
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10666046 3 +  23371972 --AAG
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7102997 3 -  16596857 --aAG
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_141108                   3212 5 -      7259 TCAAG
i Allactaga_bullata.AllBul_scaffold_141108              I 23 I 280
s Allenopithecus_nigroviridis.k141_2469532                   7223 5 -     60446 TCAAG
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         7937 5 -     29318 TCAAG
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         6875 5 +     38766 TCAAG
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          7833 5 -     80423 TCAAG
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              2770 5 +     19852 TCAAG
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                4986 5 -     12443 TCAAG
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                             2313 5 +      5070 TCAAG
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_1458234                                  84 5 +     11617 TCAAG
i Alouatta_juara.k141_1458234                           C 0 C 0
s Alouatta_macconnelli.k141_2318944                          4795 5 -     24210 TCAAG
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_494922                             1299 5 -      8325 TCAAG
i Alouatta_nigerrima.k141_494922                        C 0 C 0
s Alouatta_palliata.k141_405616                              7194 5 +     16794 TCAAG
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_347198                             1246 5 +      9111 TCAAG
i Alouatta_puruensis.k141_347198                        C 0 C 0
s Alouatta_seniculus.k141_790278                             6494 5 -      9835 TCAAG
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3529202 3 +   4113121 --AAG
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      395864 3 -    631301 --AAG
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             6614 3 +     55446 --AAA
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 68100 5 +     78111 TCAAG
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                           11041 5 +     22701 TCAAG
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5755010 5 +   9889416 TCAAG
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                            11589 5 -    104377 TCAAG
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                              11618 5 +     23246 TCAAG
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     4249 3 +     11424 --AAG
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        8199 5 +      9265 CTAAG
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                13946 3 -     29036 --AAG
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9544904 5 +  39197703 TCAAG
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             66178 5 +     85812 TCAAG
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                17188 5 +     89302 TCAAG
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             21692 5 -     58268 TCAAG
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             69686 5 +    119057 TCAAG
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              11655 5 -     25888 TCAAG
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                12757 5 -     16375 TCAAG
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_1363236                                49 5 +     13465 TCAAG
i Avahi_peyrierasi.k141_1363236                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26394531 3 +  51448160 --AAG
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                       11814 3 -     13118 --AAG
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   51400 3 -     72089 --AAG
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   306120 2 -   6870073 ---AG
i Bison_bison.KN264915.1                                I 1 C 0
s Bos_indicus.CM003021.1                                 22960226 2 + 161108492 ---AG
i Bos_indicus.CM003021.1                                I 1 C 0
s Bos_mutus.JH883513.1                                     422405 2 +    998990 ---AG
i Bos_mutus.JH883513.1                                  I 1 C 0
s Bos_taurus.CM000177.6                                  22668878 2 + 158972876 ---AG
i Bos_taurus.CM000177.6                                 I 1 C 0
s Bubalus_bubalis.KI419065.1                               677728 2 +   1914593 ---AG
i Bubalus_bubalis.KI419065.1                            I 1 C 0
s Cacajao_ayresi.k141_724503                               119518 5 -    171031 TCAAG
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 18538 5 +    125063 TCAAG
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                20585 5 -    216513 TCAAG
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       13128 5 -    134917 TCAAG
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3225742 3 -   8989139 --AAg
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           403442 3 -  15254737 --AAg
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2979180 3 +   6889770 --AAg
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11528902 3 +  39901454 --AAG
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   23876 3 +     87036 --AAG
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11275799 3 -  35597290 --AAG
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11098297 3 +  39895921 --AAG
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16465081 3 -  44759192 --AAG
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21336636 3 + 157394656 --AAG
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135714989 3 - 157403528 --AAG
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          315114 5 +    345090 tcagc
i Carlito_syrichta.NW_007248099.1                       C 0 C 0
s Carollia_perspicillata.CarPer_scaffold_4436               64921 3 +     67245 --AAG
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_1326                     1751 5 -    202837 TCAAG
i Castor_canadensis.CasCan_scaffold_1326                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   165704 3 -    276539 --AAG
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15791982 5 -  24422027 TCAAG
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15803927 5 -  24440124 TCAAG
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       182099 5 +    436027 TCAAG
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18897254 5 -  29618158 TCAAG
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                13904 5 -     26817 TCAAG
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                18147 5 +     25043 TCAAG
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                        14151 5 +     21754 tcagc
i Cephalopachus_bancanus.k141_702587                    C 0 C 0
s Ceratotherium_simum.JH767818.1                          4370730 3 +   7569818 --AAG
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_171732          887 3 +      8380 --AAG
i Ceratotherium_simum_cottoni.CerCot_scaffold_171732    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6561162 5 +   6739814 TCAAG
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      32639 5 +     60454 TCAAG
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          7843 5 -     21101 TCAAG
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         65153 5 -    107033 TCAAG
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        8014 5 -     17608 TAAAG
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          5182 5 +     45019 TCAAG
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           5450 5 +     15177 TAAAG
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          8064 5 +     16677 TCAAG
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           30252 5 +     35983 TCAAG
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11996785 5 +  12117833 TCAAG
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46483767 5 +  46592721 TCAAG
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                       1870 5 -     27215 TAAAG
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       8078 5 +     35577 TCAAG
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        7872 5 -     25661 TCAAG
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        8036 5 -     17744 TAAAG
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        27405 5 +     37128 TAAAG
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           6390 5 -      6963 TCAAG
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           64973 5 -     68416 TCAAG
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_854352                            1274 5 +     27737 TCAAG
i Cheirogaleus_medius.k141_854352                       C 0 C 0
s Cheracebus_lucifer.k141_619653                            11212 5 -     18223 TTAAG
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              2953 5 +    188999 TTAAG
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           47252 5 +     57117 TTAAG
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          51932 5 +     54541 TTAAG
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15966685 5 +  43084221 CCAAA
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         76733 5 +    196370 TCAAG
i Chiropotes_israelita.k141_1189915                     C 0 C 0
s Chiropotes_sagulatus.k141_773804                          20914 5 +     40510 TCAAG
i Chiropotes_sagulatus.k141_773804                      C 0 C 0
s Chlorocebus_aethiops.ctg22                             15145598 5 -  15256731 TCAAG
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      40062 5 -     53260 TCAAG
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101150621 5 + 101219884 TCAAG
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                20418 5 -     21363 TCAAG
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           765722 5 +    964067 TCAAG
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_304221              6215 5 -      7053 TCAGT
i Chrysochloris_asiatica.ChrAsi_scaffold_304221         C 0 C 0
s Colobus_angolensis.KN985967.1                          10890391 5 +  10971483 TCAAG
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147668319 5 + 156195979 TCAAG
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            20302 5 +     23629 TCAAG
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60624714 3 +  78930452 --AAG
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_681988           15 3 -       362 --AAG
i Craseonycteris_thonglongyai.CraTho_scaffold_681988    N 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 284745 5 -    399297 TCAAG
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53037031 5 +  72327488 TCAAG
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              4584 3 -     22648 --GGG
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            60115 3 -     70449 --AAG
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  216880 5 -    956709 TGAAT
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 38493 5 -     67205 TCAAG
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                23221 5 +     26546 TCAAT
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             64348 5 -    236241 TCAAG
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          187453 5 -   6883506 TCAAG
i Dasypus_novemcinctus.JH568778.1                       C 0 C 0
s Daubentonia_madagascariensis.ctg11                     16850913 5 +  31942871 TCAAG
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80043226 3 -  96802777 --AAG
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18704142 3 -  18957592 --AAG
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 329129 3 +    993696 --AAG
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   9763 3 +    151128 --AAG
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   162293 5 +    228994 TCAAA
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                42922 5 -     73477 TCAAG
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           23007379 5 -  44670279 TCTAG
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 16340 3 +     24177 --AAG
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1499197 3 +   1727528 --ATG
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        245733 5 -    369425 TCAAG
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01076532.1                           2084 5 +      9159 TCAAG
i Ellobius_talpinus.LOJH01076532.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85880063 3 +  99434291 --AAG
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4711919 3 +   6522550 --AAG
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5858989 3 -   7175178 --AAG
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13357475 3 +  41866177 --aag
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          18965 3 +     92910 --AAG
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11544450 3 +  16010500 --ATG
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48782631 5 -  48907691 TCAAG
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          321485 3 +    330699 --AAG
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             67937 3 +     89355 --AAG
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                             11039 5 +     13586 TCAAG
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_419870                                147 5 +      2668 TCAAG
i Eulemur_collaris.k141_419870                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            17435 5 +     36558 TCAAG
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            13757 5 +     60246 TCAAG
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                17242 5 +    109717 TCAAG
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 5225 5 -     19505 TCAAG
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                21900 5 +     27497 TCAAG
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           24350 5 +     26808 TCAAG
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                39088 5 +     46535 TCAAG
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              21829 5 -     29447 TCAAG
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129901758 3 - 159252932 --AAG
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129288735 3 - 158578461 --AAG
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 29925 3 +     52776 --AAG
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13899777 5 -  19261668 TCTAG
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     217073 5 -    847004 CCAAG
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           19435 5 -     43889 CCAAG
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          16576 5 +     27357 CCAAG
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               161352 5 +    324696 TCAAT
i Galeopterus_variegatus.GalVar_scaffold_354            C 0 I 41
s Giraffa_tippelskirchi.LVKQ01S012154.1                    188925 3 -    189561 --AAG
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           18279 5 -     18683 TCAAA
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                              11032 5 -     14630 TCAAG
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119658132 5 - 195582420 TCAAG
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         7831 5 +     10286 TCAAG
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             6312 5 -     11661 TCAAG
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                            11636 5 +     56096 TCAAG
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        34885 5 -     42470 TCAAG
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        51511 5 -     54384 TCAAG
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              25233 3 +     53719 --AAG
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                36016 3 -     91191 --AAG
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2563944 5 +  31725842 TCAag
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               65524 5 +     73687 TTAAG
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              153307 3 +    277961 --AAA
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      287270 3 -    477199 --AAG
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959               4544 3 +     26078 --AAG
i Hipposideros_galeritus.HipGal_scaffold_52959          C 0 C 0
s Hoolock_leuconedys.ctg79                                     10951 5 -   7690867 TCAAG
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 25667 3 -     67322 --AAG
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           23583 5 -    119109 TCTAG
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_1048809                              120 5 -      6555 TCAAG
i Hylobates_abbotti.k141_1048809                        C 0 C 0
s Hylobates_agilis.k141_1136966                              1527 5 +      9785 TCAAG
i Hylobates_agilis.k141_1136966                         C 0 C 0
s Hylobates_klossii.k141_1069878                               67 5 +      2316 TCAAG
i Hylobates_klossii.k141_1069878                        C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14630353 5 -  25970782 TCAAG
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            2904 5 +      4161 TCAAG
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                    11868 5 +     22540 TCAAT
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7132134 3 +  13083262 --AAG
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   3369 5 +      3484 TCAAG
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              15453 3 +     17520 --AAG
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8581129 5 +  11848649 TCAAG
i Jaculus_jaculus.JH725517.1                            I 24 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               30082 3 +     37189 --AAG
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          55775 5 -    147782 TCAAG
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    9620 3 +     26176 --AAG
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258413189 5 - 285822530 TCAAG
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        30508 5 +     39228 TCAAG
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            59874 5 +     63517 TCAAG
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        38255 5 -     38897 TCAAG
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      4300 5 -     13103 TCAAG
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3094506 3 -   3498232 --AAG
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_470947                     521 5 -      1692 TCAAG
i Lepus_americanus.LepAme_scaffold_470947               C 0 C 0
s Lipotes_vexillifer.KE558548.1                            142375 3 +   3060487 --AAG
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19254251 5 +  19376315 TCAAG
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           17016 5 +     84689 CTAAG
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3784749 5 +   6799190 CTAAG
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20601090 5 -  62548349 TCAAA
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11097753 3 +  39895028 --AAG
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             26000 5 +     74745 TCAAG
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12712463 5 +  12821369 TCAAG
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                5036 5 -     26467 TCAAG
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           52907 5 +     63263 TCAAG
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 5017 5 -     26361 TCAAG
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_2667654                                1321 5 -      5626 TCAAG
i Macaca_leonina.k141_2667654                           C 0 C 0
s Macaca_maura.k141_251854                                  51436 5 -     79256 TCAAG
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196041534 5 + 196197964 TCAAG
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11451704 5 +  11645122 TCAAG
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                  10390 5 -     46448 TCAAG
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                8052 5 -     13212 TCAAG
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 21733 5 -     55006 TCAAG
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43847156 5 +  43892939 TCAAG
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               23018 5 -     24607 TCAAG
i Macaca_thibetana.k99_662710                           C 0 C 0
s Macaca_tonkeana.k141_2870633                              10387 5 -     27140 TCAAG
i Macaca_tonkeana.k141_2870633                          C 0 C 0
s Macroglossus_sobrinus.MacSob_scaffold_879                704938 3 +    802869 --AAA
i Macroglossus_sobrinus.MacSob_scaffold_879             C 0 C 0
s Mandrillus_leucophaeus.scaffold125                     43443420 5 -  43563597 TCAAG
i Mandrillus_leucophaeus.scaffold125                    C 0 C 0
s Mandrillus_sphinx.Contig144                             4456219 5 -   4543643 TCAAG
i Mandrillus_sphinx.Contig144                           C 0 C 0
s Manis_javanica.JSZB01003966.1                            154743 3 +    252755 --AAG
i Manis_javanica.JSZB01003966.1                         C 0 C 0
s Manis_pentadactyla.KN017078.1                             42342 3 +     58827 --AAG
i Manis_pentadactyla.KN017078.1                         C 0 C 0
s Marmota_marmota.CZRN01000005.1                         36880000 3 +  64221397 --AAG
i Marmota_marmota.CZRN01000005.1                        C 0 C 0
s Megaderma_lyra.MegLyr_scaffold_3562                       68719 3 -    234502 --AAA
i Megaderma_lyra.MegLyr_scaffold_3562                   C 0 C 0
s Mellivora_capensis.MelCap_flattened_line_15433             9157 3 -     87323 --AAG
i Mellivora_capensis.MelCap_flattened_line_15433        C 0 C 0
s Meriones_unguiculatus.MerUng_scaffold_9483                 3966 5 +    115071 ACAAG
i Meriones_unguiculatus.MerUng_scaffold_9483            C 0 C 0
s Mesocricetus_auratus.KB708139.1                         1053604 5 -  26018355 TCAAG
i Mesocricetus_auratus.KB708139.1                       C 0 C 0
s Mesoplodon_bidens.MesBid_scaffold_96348                    5044 3 -     12939 --AAG
i Mesoplodon_bidens.MesBid_scaffold_96348               C 0 C 0
s Microcebus_murinus.CM007691.1                          16516229 5 +  47401472 TCAAG
i Microcebus_murinus.CM007691.1                         C 0 C 0
s Microgale_talazaci.MicTal_scaffold_34660                  47262 5 -     48017 TCTAT
i Microgale_talazaci.MicTal_scaffold_34660              C 0 C 0
s Micronycteris_hirsuta.MicHir_scaffold_37978               27870 3 -     32043 --AAG
i Micronycteris_hirsuta.MicHir_scaffold_37978           C 0 C 0
s Microtus_ochrogaster.CM001673.1                        22826567 5 -  98408828 TCAAG
i Microtus_ochrogaster.CM001673.1                       C 0 C 0
s Miopithecus_ogouensis.k141_2935907                         7970 5 +     29742 TCAAG
i Miopithecus_ogouensis.k141_2935907                    C 0 C 0
s Mirounga_angustirostris.MirAng_flattened_line_8852        19908 3 -    104932 --AAG
i Mirounga_angustirostris.MirAng_flattened_line_8852    C 0 C 0
s Mirza_zaza.k141_593947                                     6923 5 -     12809 TCAAG
i Mirza_zaza.k141_593947                                C 0 C 0
s Monodon_monoceros.MonMon_M_scaffold_5598                 152819 3 +    154973 --AAG
i Monodon_monoceros.MonMon_M_scaffold_5598              C 0 C 0
s Mormoops_blainvillei.MorMeg_scaffold_2952                166384 3 +    265003 --AAA
i Mormoops_blainvillei.MorMeg_scaffold_2952             C 0 C 0
s Moschus_moschiferus.MosMos_scaffold_78805                  9593 3 -     19904 --AAG
i Moschus_moschiferus.MosMos_scaffold_78805             C 0 C 0
s Mungos_mungo.MunMun_flattened_line_8729                  152959 3 -    168139 --AAG
i Mungos_mungo.MunMun_flattened_line_8729               C 0 C 0
s Mus_caroli.LT608236.1                                  70773849 5 +  92629107 TCAAG
i Mus_caroli.LT608236.1                                 C 0 C 0
s Mus_musculus.chr16                                     75495910 5 +  98207768 TTAAG
i Mus_musculus.chr16                                    C 0 C 0
s Mus_pahari.LT608305.1                                  67562643 5 +  89017189 TCTAG
i Mus_pahari.LT608305.1                                 C 0 C 0
s Mus_spretus.CM004110.1                                 74338614 5 +  97876770 TCAAG
i Mus_spretus.CM004110.1                                C 0 C 0
s Muscardinus_avellanarius.MusAve_scaffold_9643             17170 5 +     98495 TCAAT
i Muscardinus_avellanarius.MusAve_scaffold_9643         C 0 C 0
s Mustela_putorius.JH417978.1                             4431252 3 -  28371801 --aAG
i Mustela_putorius.JH417978.1                           C 0 C 0
s Myocastor_coypus.MyoCoy_scaffold_3653                     98325 5 -    117718 TCAAG
i Myocastor_coypus.MyoCoy_scaffold_3653                 C 0 C 0
s Myotis_brandtii.KE161952.1                               974246 3 +   8389877 --AAG
i Myotis_brandtii.KE161952.1                            C 0 C 0
s Myotis_davidii.KB114863.1                               5025325 3 +   6462685 --AAG
i Myotis_davidii.KB114863.1                             C 0 C 0
s Myotis_lucifugus.GL429887.1                             3471746 3 -   3747815 --AAG
i Myotis_lucifugus.GL429887.1                           C 0 C 0
s Myotis_myotis.MyoMyo_scaffold_6123                        16981 3 +     66751 --AAG
i Myotis_myotis.MyoMyo_scaffold_6123                    C 0 C 0
s Myrmecophaga_tridactyla.MyrTri_scaffold_239326              834 4 +      2245 TTAA-
i Myrmecophaga_tridactyla.MyrTri_scaffold_239326        I 160 I 214
s Nannospalax_galili.KL201303.1                            126318 5 +    362372 CCCAG
i Nannospalax_galili.KL201303.1                         C 0 C 0
s Nasalis_larvatus.k141_153429                              12231 5 +     48152 CCAAG
i Nasalis_larvatus.k141_153429                          C 0 C 0
s Neomonachus_schauinslandi.NINY01007774.1                4493299 3 -  14209539 --AAG
i Neomonachus_schauinslandi.NINY01007774.1              C 0 C 0
s Neophocaena_asiaeorientalis.KZ688543.1                  3957410 3 -   4490290 --AAG
i Neophocaena_asiaeorientalis.KZ688543.1                C 0 C 0
s Nomascus_annamensis.k141_881190                             338 5 -      2113 TCAAG
i Nomascus_annamensis.k141_881190                       C 0 I 16
s Nomascus_concolor.k141_256540                              8635 5 -      8966 TCAAG
i Nomascus_concolor.k141_256540                         C 0 C 0
s Nomascus_gabriellae.k141_655641                             514 5 -      1082 TCAAG
i Nomascus_gabriellae.k141_655641                       I 352 I 76
s Nomascus_siki_b.tarseq_453                             7888 5 +     12787 TCAAG
i Nomascus_siki_b.tarseq_453                        C 0 C 0
s Nomascus_siki_a.k141_421408                                  2490 5 +     16235 TCAAG
i Nomascus_siki_a.k141_421408                             C 0 C 0
s Nyctereutes_procyonoides.CAJHUB010000786.1                40630 3 +   3668941 --ACA
i Nyctereutes_procyonoides.CAJHUB010000786.1            C 0 C 0
s Nycticebus_bengalensis.LG16                            65573799 5 -  95554990 CTAAG
i Nycticebus_bengalensis.LG16                           C 0 C 0
s Nycticebus_coucang.k141_6040852                            1435 5 +      1868 CTAAG
i Nycticebus_coucang.k141_6040852                       C 0 C 0
s Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17      65681981 5 +  89412551 CTAAG
i Nycticebus_pygmaeus.lh.2rd_polish_hic_scaffold_17     C 0 C 0
s Ochotona_princeps.JH802095.1                            5001829 5 -  23139505 TCCAG
i Ochotona_princeps.JH802095.1                          C 0 C 0
s Octodon_degus.JH651621.1                                3693469 5 +  10294119 TCAAG
i Octodon_degus.JH651621.1                              C 0 C 0
s Odobenus_rosmarus.KB229369.1                             687549 3 -   3126709 --AAG
i Odobenus_rosmarus.KB229369.1                          C 0 C 0
s Odocoileus_virginianus.KZ101650.1                       1086583 3 +   1425656 --ATG
i Odocoileus_virginianus.KZ101650.1                     C 0 C 0
s Okapia_johnstoni.LVCL01S0017931.1                         44654 3 +     78940 --AAG
i Okapia_johnstoni.LVCL01S0017931.1                     C 0 C 0
s Ondatra_zibethicus.OndZib_scaffold_6821                  132374 5 +    145789 TCAAG
i Ondatra_zibethicus.OndZib_scaffold_6821               C 0 C 0
s Onychomys_torridus.OnyTor_scaffold_12578                  45306 5 +     62360 TCAAG
i Onychomys_torridus.OnyTor_scaffold_12578              C 0 C 0
s Orcinus_orca.KB316965.1                                 7231084 3 -   7562323 --AAG
i Orcinus_orca.KB316965.1                               C 0 C 0
s Orycteropus_afer.OryAfe_flattened_line_371885              2308 5 +      3658 TCATG
i Orycteropus_afer.OryAfe_flattened_line_371885         C 0 C 0
s Oryctolagus_cuniculus.CM000803.1                      141885793 5 + 163896628 TCAAG
i Oryctolagus_cuniculus.CM000803.1                      C 0 C 0
s Otocyon_megalotis.JAEUCK010005121.1                      317762 3 -    505867 --AAG
i Otocyon_megalotis.JAEUCK010005121.1                   C 0 C 0
s Otolemur_crassicaudatus.k141_505435                        6934 5 -     53940 CCAAG
i Otolemur_crassicaudatus.k141_505435                   C 0 C 0
s Otolemur_garnettii.GL873528.1                          18014899 5 -  38779656 CCAAG
i Otolemur_garnettii.GL873528.1                         C 0 C 0
s Ovis_aries.CM001582.2                                 134085798 3 - 275406953 --AAG
i Ovis_aries.CM001582.2                                 C 0 C 0
s Ovis_canadensis.OviCan_scaffold_6251                      87051 3 +    140051 --AAG
i Ovis_canadensis.OviCan_scaffold_6251                  C 0 C 0
s Pan_paniscus.CM003386.1                               127580312 5 - 205426864 TCAAG
i Pan_paniscus.CM003386.1                               I 17 C 0
s Pan_troglodytes.CM009241.2                            120157473 5 - 196562556 TCAAG
i Pan_troglodytes.CM009241.2                            I 17 C 0
s Panthera_onca.PanOnc_flattened_line_1615                  42525 3 +    295523 --AAG
i Panthera_onca.PanOnc_flattened_line_1615              C 0 C 0
s Panthera_pardus.KV860323.1                              3646339 3 +  18214204 --AAG
i Panthera_pardus.KV860323.1                            C 0 C 0
s Panthera_tigris.KE721879.1                              5035976 3 -   6340057 --AAG
i Panthera_tigris.KE721879.1                            C 0 C 0
s Pantholops_hodgsonii.KE114631.1                         1074689 3 -   1292953 --AAG
i Pantholops_hodgsonii.KE114631.1                       C 0 C 0
s Papio_anubis.CM001492.2                               188162212 5 - 188283584 TCAAG
i Papio_anubis.CM001492.2                               C 0 C 0
s Papio_cynocephalus.k141_45376                              5302 5 +     25005 TCAAG
i Papio_cynocephalus.k141_45376                         C 0 C 0
s Papio_hamadryas.Contig15                               47519584 5 +  47705337 TCAAG
i Papio_hamadryas.Contig15                              C 0 C 0
s Papio_kindae.k141_5458022                                 73577 5 -    104429 TCAAG
i Papio_kindae.k141_5458022                             C 0 C 0
s Papio_papio.k141_979496                                   12107 5 +     14967 TCAAG
i Papio_papio.k141_979496                               C 0 C 0
s Papio_ursinus.k141_899489                                   777 5 -     13896 TCAAG
i Papio_ursinus.k141_899489                             C 0 C 0
s Paradoxurus_hermaphroditus.ParHer_flattened_line_6146    123991 3 -    135482 --AAG
i Paradoxurus_hermaphroditus.ParHer_flattened_line_6146 C 0 C 0
s Perodicticus_ibeanus.k141_117958                          12588 5 -     23713 CTAAG
i Perodicticus_ibeanus.k141_117958                      C 0 C 0
s Perodicticus_potto.k141_1136815                           13739 5 +     61070 CTAAG
i Perodicticus_potto.k141_1136815                       C 0 C 0
s Peromyscus_maniculatus.KI615458.1                       2841120 5 -   3366660 TCAAG
i Peromyscus_maniculatus.KI615458.1                     C 0 C 0
s Petromus_typicus.PetTyp_scaffold_33007                    19880 4 -     36578 TCAA-
i Petromus_typicus.PetTyp_scaffold_33007                C 0 C 0
s Phocoena_phocoena.PhoPho_flattened_line_53071              5544 3 +      8220 --AAG
i Phocoena_phocoena.PhoPho_flattened_line_53071         C 0 C 0
s Piliocolobus_badius.k141_1841783                            289 5 +     32900 TCAAG
i Piliocolobus_badius.k141_1841783                      N 0 C 0
s Piliocolobus_gordonorum.k141_1460099                        305 5 +     70245 TCAAG
i Piliocolobus_gordonorum.k141_1460099                  N 0 C 0
s Piliocolobus_kirkii.k141_929665                            6057 5 +      7694 TCAAG
i Piliocolobus_kirkii.k141_929665                       I 306 C 0
s Piliocolobus_tephrosceles.PDMG02000036.1               26744538 5 +  26888534 TCAAG
i Piliocolobus_tephrosceles.PDMG02000036.1              I 304 C 0
s Pipistrellus_pipistrellus.PipPip_scaffold_3306           102467 3 +    112873 --AAG
i Pipistrellus_pipistrellus.PipPip_scaffold_3306        C 0 C 0
s Pithecia_albicans.k141_991845                             45926 5 -     61926 TCAGG
i Pithecia_albicans.k141_991845                         C 0 C 0
s Pithecia_chrysocephala.k141_159118                        27302 5 +     78826 TCAGG
i Pithecia_chrysocephala.k141_159118                    C 0 C 0
s Pithecia_hirsuta.k141_1152968                             11357 5 -     15800 TCAGG
i Pithecia_hirsuta.k141_1152968                         C 0 C 0
s Pithecia_mittermeieri.k141_2119203                        14556 5 -     16101 TCAGG
i Pithecia_mittermeieri.k141_2119203                    C 0 C 0
s Pithecia_pissinattii.k141_1102319                          7785 5 +      9673 TCAGG
i Pithecia_pissinattii.k141_1102319                     C 0 C 0
s Pithecia_pithecia.tarseq_313                           13476778 5 -  19735023 TCAGG
i Pithecia_pithecia.tarseq_313                          C 0 C 0
s Pithecia_vanzolinii.k141_831006                           15688 5 -     31692 TCAGG
i Pithecia_vanzolinii.k141_831006                       C 0 C 0
s Platanista_gangetica.PlaMin_flattened_line_72990          12052 3 +     21690 --AAG
i Platanista_gangetica.PlaMin_flattened_line_72990      C 0 C 0
s Plecturocebus_bernhardi.k141_959214                       27864 5 +     44506 TCAAG
i Plecturocebus_bernhardi.k141_959214                   C 0 C 0
s Plecturocebus_brunneus.k141_498086                        28077 5 +     67491 TCAAG
i Plecturocebus_brunneus.k141_498086                    C 0 C 0
s Plecturocebus_caligatus.k141_2539816                      18316 5 -     98129 TCAAG
i Plecturocebus_caligatus.k141_2539816                  C 0 C 0
s Plecturocebus_cinerascens.k141_744510                     27917 5 +    147771 TCAAG
i Plecturocebus_cinerascens.k141_744510                 C 0 C 0
s Plecturocebus_cupreus.k141_1145860                         4552 5 -     43940 TCAAG
i Plecturocebus_cupreus.k141_1145860                    C 0 C 0
s Plecturocebus_dubius.k141_3565563                          8635 5 -     55515 TCAAG
i Plecturocebus_dubius.k141_3565563                     C 0 C 0
s Plecturocebus_grovesi.k141_242819                         27989 5 +    152463 TCAAG
i Plecturocebus_grovesi.k141_242819                     C 0 C 0
s Plecturocebus_hoffmannsi.k141_985533                       5793 5 -    119457 TCAAG
i Plecturocebus_hoffmannsi.k141_985533                  C 0 C 0
s Plecturocebus_miltoni.k141_841561                         17711 5 +    134592 TCAAG
i Plecturocebus_miltoni.k141_841561                     C 0 C 0
s Plecturocebus_moloch.k141_890597                          28299 5 -     75465 TCAAG
i Plecturocebus_moloch.k141_890597                      C 0 C 0
s Pongo_abelii.NDHI03003816.1                              192940 5 -    373494 TCAAG
i Pongo_abelii.NDHI03003816.1                           C 0 C 0
s Pongo_pygmaeus.ctg62                                   19813593 5 +  19899266 TCAAG
i Pongo_pygmaeus.ctg62                                  C 0 C 0
s Presbytis_comata.k141_672698                               9513 5 -     15069 TCAAG
i Presbytis_comata.k141_672698                          C 0 C 0
s Presbytis_mitrata.k141_860013                              9628 5 +     14865 TCAAG
i Presbytis_mitrata.k141_860013                         C 0 C 0
s Procavia_capensis.ProCapCap_scaffold_149274                6631 5 -      9567 TTAAG
i Procavia_capensis.ProCapCap_scaffold_149274           C 0 C 0
s Prolemur_simus.MPIZ01000048.1                           6854565 5 +  12164890 TCAAG
i Prolemur_simus.MPIZ01000048.1                         C 0 C 0
s Propithecus_coronatus.k141_1353159                         9663 5 +     11805 TCAAG
i Propithecus_coronatus.k141_1353159                    C 0 C 0
s Propithecus_diadema.k141_577245                           48993 5 +     52369 TCAAG
i Propithecus_diadema.k141_577245                       C 0 C 0
s Propithecus_edwardsi.k141_1317105                         41380 5 -     44753 TCAAG
i Propithecus_edwardsi.k141_1317105                     C 0 C 0
s Propithecus_perrieri.k141_7554                            23303 5 +     27322 TCAAG
i Propithecus_perrieri.k141_7554                        C 0 C 0
s Propithecus_tattersalli.k141_907138                       22955 5 -     53241 TCAAG
i Propithecus_tattersalli.k141_907138                   C 0 C 0
s Propithecus_verreauxi.k141_158021                         45218 5 -     48185 TCAAG
i Propithecus_verreauxi.k141_158021                     C 0 C 0
s Psammomys_obesus.NESX01026517.1                           40936 5 +     77221 tcaAG
i Psammomys_obesus.NESX01026517.1                       C 0 C 0
s Pteronotus_parnellii.KE867983.1                            9062 3 -     27784 --aaa
i Pteronotus_parnellii.KE867983.1                       C 0 C 0
s Pteronura_brasiliensis.PteBra_flattened_line_1343        252903 3 -    344369 --AAG
i Pteronura_brasiliensis.PteBra_flattened_line_1343     C 0 C 0
s Pteropus_alecto.KB031157.1                             13250144 3 -  17261082 --AAG
i Pteropus_alecto.KB031157.1                            C 0 C 0
s Pteropus_vampyrus.ABRP02213537.1                            406 3 -      2094 --AAG
i Pteropus_vampyrus.ABRP02213537.1                      C 0 C 0
s Puma_concolor.QAVW01000427.1                          131542666 3 - 161321710 --AAG
i Puma_concolor.QAVW01000427.1                          C 0 C 0
s Pygathrix_cinerea.k141_374971                             33619 5 +     56732 TCAAG
i Pygathrix_cinerea.k141_374971                         C 0 C 0
s Pygathrix_nigripes_b.ctg79                                 6810116 5 +   6970761 TCAAG
i Pygathrix_nigripes_b.ctg79                               C 0 C 0
s Pygathrix_nigripes_a.k141_101123                             9505 5 +     18040 TCAAG
i Pygathrix_nigripes_a.k141_101123                        C 0 C 0
s Rangifer_tarandus.RanTarSib_scaffold_24239                23431 3 +     68503 --ATG
i Rangifer_tarandus.RanTarSib_scaffold_24239            C 0 C 0
s Rattus_norvegicus.chr11                                13921331 5 +  90463843 TCAAA
i Rattus_norvegicus.chr11                               C 0 C 0
s Rhinolophus_sinicus.LVEH01000179.1                      1796247 3 +   2252614 --aag
i Rhinolophus_sinicus.LVEH01000179.1                    C 0 C 0
s Rhinopithecus_bieti.k119_554384                            3884 5 -     17045 TCAAG
i Rhinopithecus_bieti.k119_554384                       C 0 C 0
s Rhinopithecus_roxellana.NC_044549.1                   206381371 5 - 206558726 TCAAG
i Rhinopithecus_roxellana.NC_044549.1                   C 0 C 0
s Rhinopithecus_strykeri.ctg4                            44860274 5 -  45163003 TCAAG
i Rhinopithecus_strykeri.ctg4                           C 0 C 0
s Rousettus_aegyptiacus.RouAeg_scaffold_9606                23349 3 +    109198 --AAA
i Rousettus_aegyptiacus.RouAeg_scaffold_9606            C 0 C 0
s Saiga_tatarica.SaiTat_scaffold_371890                      4315 3 -      4338 --AAG
i Saiga_tatarica.SaiTat_scaffold_371890                 C 0 C 0
s Saimiri_boliviensis.NW_024100938.1                     15678309 5 -  43202129 TCAAG
i Saimiri_boliviensis.NW_024100938.1                    C 0 C 0
s Saimiri_cassiquiarensis.k141_808270                       10223 5 +     34089 TCAAG
i Saimiri_cassiquiarensis.k141_808270                   C 0 C 0
s Saimiri_macrodon.k141_2087127                             10162 5 -     60842 TCAAG
i Saimiri_macrodon.k141_2087127                         C 0 C 0
s Saimiri_oerstedii.k141_841116                             10256 5 +     67014 TCAAG
i Saimiri_oerstedii.k141_841116                         C 0 C 0
s Saimiri_sciureus.k141_1947592                             10233 5 +     60816 TCAAG
i Saimiri_sciureus.k141_1947592                         C 0 C 0
s Saimiri_ustus.k141_1282476                                10170 5 -     76454 TCAAG
i Saimiri_ustus.k141_1282476                            C 0 C 0
s Sapajus_apella.ctg10                                   17346942 5 -  30362882 TCAAG
i Sapajus_apella.ctg10                                  C 0 C 0
s Sapajus_macrocephalus.k141_966464                         26263 5 -     62485 TCAAG
i Sapajus_macrocephalus.k141_966464                     C 0 C 0
s Scalopus_aquaticus.ScaAqu_scaffold_9300                   42181 3 -    114521 --AAG
i Scalopus_aquaticus.ScaAqu_scaffold_9300               C 0 C 0
s Semnopithecus_entellus.k141_1572367                        7120 5 +     15331 TCAAG
i Semnopithecus_entellus.k141_1572367                   C 0 C 0
s Semnopithecus_hypoleucos.k141_761524                      12495 5 +     20762 TCAAG
i Semnopithecus_hypoleucos.k141_761524                  C 0 C 0
s Semnopithecus_johnii.k141_785014                         122501 5 +    130994 TCAAG
i Semnopithecus_johnii.k141_785014                      C 0 C 0
s Semnopithecus_priam.k141_410937                           41279 5 +     46263 TCAAG
i Semnopithecus_priam.k141_410937                       C 0 C 0
s Semnopithecus_schistaceus.k141_387461                     34424 5 +     42640 TCAAG
i Semnopithecus_schistaceus.k141_387461                 C 0 C 0
s Semnopithecus_vetulus.k141_1143185                        17446 5 +     30600 TCAAG
i Semnopithecus_vetulus.k141_1143185                    C 0 C 0
s Sigmodon_hispidus.SigHis_scaffold_11332                  107528 5 -    120886 TCAAG
i Sigmodon_hispidus.SigHis_scaffold_11332               C 0 C 0
s Solenodon_paradoxus.SolPar_flattened_line_1012            26831 3 +    739146 --AAG
i Solenodon_paradoxus.SolPar_flattened_line_1012        C 0 C 0
s Sorex_araneus.JH798170.1                               17777157 3 -  27805282 --GGG
i Sorex_araneus.JH798170.1                              C 0 C 0
s Spermophilus_dauricus.KZ294190.1                        2245835 3 +   2842873 --AAG
i Spermophilus_dauricus.KZ294190.1                      C 0 C 0
s Spilogale_gracilis.SpiGra_flattened_line_905             241667 3 -    276980 --AAG
i Spilogale_gracilis.SpiGra_flattened_line_905          C 0 C 0
s Suricata_suricatta.SurSur_flattened_line_20339            35863 3 +     62062 --AAG
i Suricata_suricatta.SurSur_flattened_line_20339        C 0 C 0
s Sus_scrofa.CM000824.4                                 189278089 3 + 218635234 --aag
i Sus_scrofa.CM000824.4                                 C 0 C 0
s Tadarida_brasiliensis.TadBra_scaffold_61492                5323 3 +     20549 --AAG
i Tadarida_brasiliensis.TadBra_scaffold_61492           C 0 C 0
s Tamandua_tetradactyla.TamTet_scaffold_26877               19112 4 +     45698 TTAA-
i Tamandua_tetradactyla.TamTet_scaffold_26877           C 0 I 2
s Tapirus_indicus.TapInd_scaffold_176                      813460 3 +   1148477 --AAG
i Tapirus_indicus.TapInd_scaffold_176                   C 0 C 0
s Tapirus_terrestris.TapTer_scaffold_14939                  64096 3 +     99546 --AAG
i Tapirus_terrestris.TapTer_scaffold_14939              C 0 C 0
s Tarsius_lariang.k141_609102                               32974 5 +     42269 tcagc
i Tarsius_lariang.k141_609102                           C 0 C 0
s Theropithecus_gelada.CM009951.1                       194013745 5 - 194193292 TCAAG
i Theropithecus_gelada.CM009951.1                       C 0 C 0
s Thryonomys_swinderianus.ThrSwi_scaffold_17512             40978 4 -     47444 TAAA-
i Thryonomys_swinderianus.ThrSwi_scaffold_17512         C 0 C 0
s Tolypeutes_matacus.TolMat_scaffold_475685                  2236 5 -      3104 TCAAG
i Tolypeutes_matacus.TolMat_scaffold_475685             C 0 C 0
s Tonatia_saurophila.TonSau_scaffold_3334                  141045 3 -    259118 --AAG
i Tonatia_saurophila.TonSau_scaffold_3334               C 0 C 0
s Trachypithecus_auratus.k141_738098                        30767 5 +     38948 TCAAG
i Trachypithecus_auratus.k141_738098                    C 0 C 0
s Trachypithecus_crepusculus.k141_1588528                   24327 5 -     32910 TCAAG
i Trachypithecus_crepusculus.k141_1588528               C 0 C 0
s Trachypithecus_cristatus.k141_1011511                      6228 5 -     12939 TCAAG
i Trachypithecus_cristatus.k141_1011511                 C 0 C 0
s Trachypithecus_francoisi.k141_768164                       5656 5 -     14244 TCAAG
i Trachypithecus_francoisi.k141_768164                  C 0 C 0
s Trachypithecus_geei.k141_670367                           47049 5 -     54611 TCAAG
i Trachypithecus_geei.k141_670367                       C 0 C 0
s Trachypithecus_germaini.k141_868450                        4850 5 -     11566 TCAAG
i Trachypithecus_germaini.k141_868450                   C 0 C 0
s Trachypithecus_hatinhensis.k141_504423                     7034 5 -     15592 TCAAG
i Trachypithecus_hatinhensis.k141_504423                C 0 C 0
s Trachypithecus_laotum.k141_760702                          5686 5 +     14371 TCAAG
i Trachypithecus_laotum.k141_760702                     C 0 C 0
s Trachypithecus_leucocephalus.k141_381681                   3972 5 +     12481 TCAAG
i Trachypithecus_leucocephalus.k141_381681              C 0 C 0
s Trachypithecus_melamera.k141_699241                        3953 5 -     24393 TCAAG
i Trachypithecus_melamera.k141_699241                   C 0 C 0
s Trachypithecus_obscurus.k141_1115109                       9097 5 -     28054 TCAAG
i Trachypithecus_obscurus.k141_1115109                  C 0 C 0
s Trachypithecus_phayrei.ctg3                            44663881 5 -  44834318 TCAAG
i Trachypithecus_phayrei.ctg3                           C 0 C 0
s Trachypithecus_pileatus.k141_1022309                       6193 5 +     13828 TCAAG
i Trachypithecus_pileatus.k141_1022309                  C 0 C 0
s Tragulus_javanicus.TraJav_scaffold_14717                  11932 3 +     90398 --AAG
i Tragulus_javanicus.TraJav_scaffold_14717              C 0 C 0
s Trichechus_manatus.JH594618.1                          16092168 5 +  31416278 TCAAG
i Trichechus_manatus.JH594618.1                         C 0 C 0
s Tupaia_chinensis.KB320831.1                             2802872 5 -   3938065 TTAAG
i Tupaia_chinensis.KB320831.1                           C 0 C 0
s Tupaia_tana.TupTan_flattened_line_68454                   11696 5 +     13056 TTAAG
i Tupaia_tana.TupTan_flattened_line_68454               C 0 C 0
s Tursiops_truncatus.MRVK01000923.1                      69319814 3 -  96451834 --AAG
i Tursiops_truncatus.MRVK01000923.1                     C 0 C 0
s Uropsilus_gracilis.UroGra_scaffold_4115                    2519 3 +    136657 --AAG
i Uropsilus_gracilis.UroGra_scaffold_4115               C 0 C 0
s Ursus_maritimus.KK498671.1                              6523313 3 +  28682327 --AAG
i Ursus_maritimus.KK498671.1                            C 0 C 0
s Varecia_rubra.k141_432109                                 11230 5 -     20643 TCAAG
i Varecia_rubra.k141_432109                             C 0 C 0
s Varecia_variegata.k141_775891                             30765 5 -     33872 TCAAG
i Varecia_variegata.k141_775891                         C 0 C 0
s Vicugna_pacos.KN269600.1                                1530850 3 -   2331223 --AAg
i Vicugna_pacos.KN269600.1                              C 0 C 0
s Vulpes_lagopus.VulLag_flattened_line_2045                146988 3 -    281493 --AAG
i Vulpes_lagopus.VulLag_flattened_line_2045             C 0 C 0
s Xerus_inauris.XerIna_scaffold_7898                       133330 3 -    134049 --AAG
i Xerus_inauris.XerIna_scaffold_7898                    C 0 C 0
s Zalophus_californianus.ZalCal_flattened_line_4097        222410 3 -    227762 --AAG
i Zalophus_californianus.ZalCal_flattened_line_4097     C 0 C 0
s Zapus_hudsonius.ZapHud_scaffold_202118                     2937 5 -      3360 TCAAG
i Zapus_hudsonius.ZapHud_scaffold_202118                C 0 C 0
s Ziphius_cavirostris.ZipCav_flattened_line_60625            4407 3 -     13665 --AAG
i Ziphius_cavirostris.ZipCav_flattened_line_60625       C 0 C 0
e Perognathus_longimembris.PerPac_flattened_line_19359       3994 0 +     49596 C
e Dipodomys_stephensi.DipSte_scaffold_84338                  4348 0 -     11986 C
e Dipodomys_ordii.KN672545.1                              3661994 0 +   4240102 C
e Noctilio_leporinus.NocLep_scaffold_12062                  53142 337 +     94413 I
e Murina_feae.MurFea_scaffold_2254                          26669 255 -    100666 I
e Miniopterus_schreibersii.MinSch_scaffold_24116            40144 474 +     45743 I
e Miniopterus_natalensis.LDJU01000022.1                   8215685 474 +  10048721 I
e Elephantulus_edwardii.JH947210.1                        7837010 301 +  15467074 I
e Hylobates_pileatus_a.tarseq_592                             37267 2881 -     60944 I
e Propithecus_coquerelli.NW_012147997.1                    674065 544 -   2312742 I
e Graphiurus_murinus.GraMur_scaffold_4493                   81514 0 +    118900 C
e Symphalangus_syndactylus.tarseq_24                        20205 0 -  13920577 C

a score=0.000000
s hg38.chr4_GL000008v2_random                               19332 16 +    209709 AAC-----AAGAA-G-----------------------------AAATGTT
s Acinonyx_jubatus.LLWD01000356.1                         2042186 19 +   3721120 Ggt-tat-aagaa-t-----------------------------aaatatt
i Acinonyx_jubatus.LLWD01000356.1                       C 0 C 0
s Acomys_cahirinus.AcoCah_scaffold_1625                    119846 19 -    189883 GATTA-C-AAAAA-T-----------------------------ATACATT
i Acomys_cahirinus.AcoCah_scaffold_1625                 C 0 C 0
s Ailuropoda_melanoleuca.LNAT01000321.1                  10666049 19 +  23371972 GGTC-gt-aagaa-t-----------------------------aaatatt
i Ailuropoda_melanoleuca.LNAT01000321.1                 C 0 C 0
s Ailurus_fulgens.LNAC01000003.1                          7103000 19 -  16596857 GGT-tgt-aagaa-t-----------------------------aaatatt
i Ailurus_fulgens.LNAC01000003.1                        C 0 C 0
s Allactaga_bullata.AllBul_scaffold_67806                    7059 19 +     22864 TCATAT--AAGAA-T-----------------------------AAACATT
i Allactaga_bullata.AllBul_scaffold_67806               I 5 C 0
s Allenopithecus_nigroviridis.k141_2469532                   7228 16 -     60446 AAC-----AAGAA-G-----------------------------AAATGTT
i Allenopithecus_nigroviridis.k141_2469532              C 0 C 0
s Allochrocebus_lhoesti.k141_3566948                         7942 16 -     29318 AAC-----AAGAA-G-----------------------------AAATGTT
i Allochrocebus_lhoesti.k141_3566948                    C 0 C 0
s Allochrocebus_preussi.k141_1108977                         6880 16 +     38766 AAC-----AAGAA-G-----------------------------AAATGTT
i Allochrocebus_preussi.k141_1108977                    C 0 C 0
s Allochrocebus_solatus.k141_371672                          7838 16 -     80423 AAC-----AAGAA-G-----------------------------AAATGTT
i Allochrocebus_solatus.k141_371672                     C 0 C 0
s Alouatta_belzebul.k141_276091                              2775 16 +     19852 AAC-----AAGAA-G-----------------------------AAATGTT
i Alouatta_belzebul.k141_276091                         C 0 C 0
s Alouatta_caraya.k141_664908                                4991 16 -     12443 AAC-----AAGAA-G-----------------------------AAATGTT
i Alouatta_caraya.k141_664908                           C 0 C 0
s Alouatta_discolor.k141_2023149                             2318 16 +      5070 AAC-----AAGAA-G-----------------------------AAATGTT
i Alouatta_discolor.k141_2023149                        C 0 C 0
s Alouatta_juara.k141_1458234                                  89 16 +     11617 AAC-----AAGAA-G-----------------------------AAATGTT
i Alouatta_juara.k141_1458234                           C 0 C 0
s Alouatta_macconnelli.k141_2318944                          4800 16 -     24210 AAC-----AAGAA-G-----------------------------AAATGTT
i Alouatta_macconnelli.k141_2318944                     C 0 C 0
s Alouatta_nigerrima.k141_494922                             1304 16 -      8325 AAC-----AAGAA-G-----------------------------AAATGTT
i Alouatta_nigerrima.k141_494922                        C 0 C 0
s Alouatta_palliata.k141_405616                              7199 16 +     16794 AAC-----AAGAA-G-----------------------------AAATGTT
i Alouatta_palliata.k141_405616                         C 0 C 0
s Alouatta_puruensis.k141_347198                             1251 16 +      9111 AAC-----AAGAA-G-----------------------------AAATGTT
i Alouatta_puruensis.k141_347198                        C 0 C 0
s Alouatta_seniculus.k141_790278                             6499 16 -      9835 AAC-----AAGAA-G-----------------------------AAATGTT
i Alouatta_seniculus.k141_790278                        C 0 C 0
s Ammotragus_lervia.NIVO01013474.1                        3529205 19 +   4113121 GGTCAT--AAGAA-T-----------------------------AAAAGTT
i Ammotragus_lervia.NIVO01013474.1                      C 0 C 0
s Anoura_caudifer.AnoCau_scaffold_422                      395867 19 -    631301 GGTCA-C-AAGAA-T-----------------------------AAATTTT
i Anoura_caudifer.AnoCau_scaffold_422                   C 0 C 0
s Antilocapra_americana.AntAmePen_scaffold_27338             6617 19 +     55446 GGTCA-G-AAGAA-T-----------------------------AAAAGTT
i Antilocapra_americana.AntAmePen_scaffold_27338        C 0 C 0
s Aotus_azarae.k141_3170768                                 68105 13 +     78111 AAC--------AA-G-----------------------------AAATGTT
i Aotus_azarae.k141_3170768                             C 0 C 0
s Aotus_griseimembra.k141_3275623                           11046 13 +     22701 AAC--------AA-G-----------------------------AAATGTT
i Aotus_griseimembra.k141_3275623                       C 0 C 0
s Aotus_nancymaae.KZ196176.1                              5755015 13 +   9889416 AAC--------AA-G-----------------------------AAATGTT
i Aotus_nancymaae.KZ196176.1                            C 0 C 0
s Aotus_trivirgatus.k141_1740727                            11594 13 -    104377 AAC--------AA-G-----------------------------AAATGTT
i Aotus_trivirgatus.k141_1740727                        C 0 C 0
s Aotus_vociferans.k141_718647                              11623 13 +     23246 AAC--------AA-G-----------------------------AAATGTT
i Aotus_vociferans.k141_718647                          C 0 C 0
s Aplodontia_rufa.AprRuf_scaffold_101456                     4252 19 +     11424 GGTCA-C-AAGAA-T-----------------------------AAATGTT
i Aplodontia_rufa.AprRuf_scaffold_101456                C 0 C 0
s Arctocebus_calabarensis.k141_587554                        8204 19 +      9265 GGTC-CC-AGAAA-T-----------------------------AAATGTG
i Arctocebus_calabarensis.k141_587554                   C 0 C 0
s Artibeus_jamaicensis.ArtJam_scaffold_41619                13949 19 -     29036 GGTCA-C-GAAAA-T-----------------------------AAATTTT
i Artibeus_jamaicensis.ArtJam_scaffold_41619            C 0 C 0
s Ateles_geoffroyi_b.tarseq_2582                             9544909 16 +  39197703 AAC-----AAGAA-G-----------------------------AAATGTT
i Ateles_geoffroyi_b.tarseq_2582                           C 0 C 0
s Ateles_belzebuth.k141_1348307                             66183 16 +     85812 AAC-----AAGAA-G-----------------------------AAATGTT
i Ateles_belzebuth.k141_1348307                         C 0 C 0
s Ateles_chamek.k141_1072810                                17193 16 +     89302 AAC-----AACAA-G-----------------------------AAATGTT
i Ateles_chamek.k141_1072810                            C 0 C 0
s Ateles_geoffroyi_a.k141_1300742                             21697 16 -     58268 AAC-----AAGAA-G-----------------------------AAATGTT
i Ateles_geoffroyi_a.k141_1300742                         C 0 C 0
s Ateles_marginatus.k141_899112                             69691 16 +    119057 AAC-----AAGAA-G-----------------------------AAATGTT
i Ateles_marginatus.k141_899112                         C 0 C 0
s Ateles_paniscus.k141_1631200                              11660 16 -     25888 AAC-----AAGAA-G-----------------------------AAATGTT
i Ateles_paniscus.k141_1631200                          C 0 C 0
s Avahi_laniger.k141_2840928                                12762 19 -     16375 GGT--TCCAGAAA-T-----------------------------AAATGTG
i Avahi_laniger.k141_2840928                            C 0 C 0
s Avahi_peyrierasi.k141_1363236                                54 19 +     13465 GGT--TCCAGAAA-T-----------------------------AAATGTG
i Avahi_peyrierasi.k141_1363236                         C 0 C 0
s Balaenoptera_acutorostrata.KI537095.1                  26394534 19 +  51448160 GGTCA-C-AAGAA-T-----------------------------AAAATTC
i Balaenoptera_acutorostrata.KI537095.1                 C 0 C 0
s Balaenoptera_bonaerensis.DF502048.1                       11817 19 -     13118 GGTCA-C-AAGAA-T-----------------------------AAAATTC
i Balaenoptera_bonaerensis.DF502048.1                   C 0 C 0
s Beatragus_hunteri.BeaHun_scaffold_21644                   51403 19 -     72089 GGCCAT--AAGAA-T-----------------------------GAAAGTT
i Beatragus_hunteri.BeaHun_scaffold_21644               C 0 C 0
s Bison_bison.KN264915.1                                   306122 19 -   6870073 GGTCA-C-AAGAA-T-----------------------------AAAAGTT
i Bison_bison.KN264915.1                                C 0 C 0
s Bos_indicus.CM003021.1                                 22960228 19 + 161108492 GGTCA-C-AAGAA-T-----------------------------AAAAGTT
i Bos_indicus.CM003021.1                                C 0 C 0
s Bos_mutus.JH883513.1                                     422407 19 +    998990 GGTCA-C-AAGAA-T-----------------------------AAAAGTT
i Bos_mutus.JH883513.1                                  C 0 C 0
s Bos_taurus.CM000177.6                                  22668880 19 + 158972876 GGTCA-C-AAGAA-T-----------------------------AAAAGTT
i Bos_taurus.CM000177.6                                 C 0 C 0
s Bubalus_bubalis.KI419065.1                               677730 19 +   1914593 GGTCA-C-AAGAA-T-----------------------------AAAAGTT
i Bubalus_bubalis.KI419065.1                            C 0 C 0
s Cacajao_ayresi.k141_724503                               119523 16 -    171031 AAC-----AAGAA-G-----------------------------AAATGGT
i Cacajao_ayresi.k141_724503                            C 0 C 0
s Cacajao_calvus.k141_96166                                 18543 16 +    125063 AAC-----AAGAA-G-----------------------------AAATGGT
i Cacajao_calvus.k141_96166                             C 0 C 0
s Cacajao_hosomi.k141_303789                                20590 16 -    216513 AAC-----AAGAA-G-----------------------------AAATGGT
i Cacajao_hosomi.k141_303789                            C 0 C 0
s Cacajao_melanocephalus.k141_1160263                       13133 16 -    134917 AAC-----AAGAA-G-----------------------------AAATGGT
i Cacajao_melanocephalus.k141_1160263                   C 0 C 0
s Camelus_bactrianus.KN276303.1                           3225745 19 -   8989139 ggt-cat-aaaaa-t-----------------------------aaatgtt
i Camelus_bactrianus.KN276303.1                         C 0 C 0
s Camelus_dromedarius.KN271192.1                           403445 19 -  15254737 ggt-cat-aaaaa-t-----------------------------aaatgtt
i Camelus_dromedarius.KN271192.1                        C 0 C 0
s Camelus_ferus.KB016973.1                                2979183 19 +   6889770 ggt-cat-aaaaa-t-----------------------------aaatgtt
i Camelus_ferus.KB016973.1                              C 0 C 0
s CanFam4.chr31                                          11528905 19 +  39901454 GGTTGT--AAGAA-T-----------------------------AAATATT
i CanFam4.chr31                                         C 0 C 0
s Canis_lupus_VD.CanFam_VD_scaffold_16982                   23879 19 +     87036 GGTTGT--AAGAA-T-----------------------------AAATATT
i Canis_lupus_VD.CanFam_VD_scaffold_16982               C 0 C 0
s Canis_lupus_dingo.QKWQ01001993.1                       11275802 19 -  35597290 GGt-tgt-aagaa-t-----------------------------aaatatt
i Canis_lupus_dingo.QKWQ01001993.1                      C 0 C 0
s Canis_lupus_familiaris.chr31                           11098300 19 +  39895921 GGt-tgt-aagaa-t-----------------------------aaatatt
i Canis_lupus_familiaris.chr31                          C 0 C 0
s Canis_lupus_orion.HG994411.1                           16465084 19 -  44759192 GGt-tgt-aagaa-t-----------------------------aaatatt
i Canis_lupus_orion.HG994411.1                          C 0 C 0
s Capra_aegagrus.CM003214.1                              21336639 19 + 157394656 GGTCAT--AAGAA-T-----------------------------AAAAGTT
i Capra_aegagrus.CM003214.1                             C 0 C 0
s Capra_hircus.CM004562.1                               135714992 19 - 157403528 GGTCAT--AAGAA-T-----------------------------AAAAGTT
i Capra_hircus.CM004562.1                               C 0 C 0
s Carlito_syrichta.NW_007248099.1                          315119 16 +    345090 aaa-----cagaa-t-----------------------------aaagctg
i Carlito_syrichta.NW_007248099.1                       C 0 I 1641
s Carollia_perspicillata.CarPer_scaffold_4436               64924 19 +     67245 GGTCAT--GAGAA-T-----------------------------AAATTTT
i Carollia_perspicillata.CarPer_scaffold_4436           C 0 C 0
s Castor_canadensis.CasCan_scaffold_1326                     1756 19 -    202837 GGACA-C-AAAAA-T-----------------------------AAACATT
i Castor_canadensis.CasCan_scaffold_1326                C 0 C 0
s Catagonus_wagneri.CatWag_scaffold_1305                   165707 19 -    276539 TGTC-TC-AAGAA-T-----------------------------AAATGTT
i Catagonus_wagneri.CatWag_scaffold_1305                C 0 C 0
s Cavia_aperea.AVPZ01000278.1                            15791987 19 -  24422027 GGTGA-C-AAGAA-T-----------------------------AAATTTT
i Cavia_aperea.AVPZ01000278.1                           C 0 C 0
s Cavia_porcellus.DS562889.1                             15803932 19 -  24440124 GGTGA-C-AAGAA-T-----------------------------AAATTTT
i Cavia_porcellus.DS562889.1                            C 0 C 0
s Cavia_tschudii.CavTsc_scaffold_488                       182104 19 +    436027 GGTGA-C-AAGAA-T-----------------------------AAATTTT
i Cavia_tschudii.CavTsc_scaffold_488                    C 0 C 0
s Cebus_albifrons.Contig22                               18897259 13 -  29618158 AAC--------AA-G-----------------------------AAATGTT
i Cebus_albifrons.Contig22                              C 0 C 0
s Cebus_olivaceus.k141_93739                                13909 13 -     26817 AAC--------AA-G-----------------------------AAATGTT
i Cebus_olivaceus.k141_93739                            C 0 C 0
s Cebus_unicolor.k141_239009                                18152 13 +     25043 AAC--------AA-G-----------------------------AAATGTT
i Cebus_unicolor.k141_239009                            C 0 C 0
s Cephalopachus_bancanus.k141_702587                        14156 16 +     21754 aaa-----cagaa-c-----------------------------aaagctg
i Cephalopachus_bancanus.k141_702587                    C 0 I 1639
s Ceratotherium_simum.JH767818.1                          4370733 19 +   7569818 GATCA-C-AAAAA-T-----------------------------TAATGTT
i Ceratotherium_simum.JH767818.1                        C 0 C 0
s Ceratotherium_simum_cottoni.CerCot_scaffold_171732          890 19 +      8380 GATCA-C-AAAAA-T-----------------------------TAATGTT
i Ceratotherium_simum_cottoni.CerCot_scaffold_171732    C 0 C 0
s Cercocebus_atys.KQ010443.1                              6561167 16 +   6739814 AAC-----AAGAA-G-----------------------------AAATGTT
i Cercocebus_atys.KQ010443.1                            C 0 C 0
s Cercocebus_chrysogaster.k141_2328246                      32644 16 +     60454 AAC-----AAGAA-G-----------------------------AAATGTT
i Cercocebus_chrysogaster.k141_2328246                  C 0 C 0
s Cercocebus_lunulatus.k141_4634644                          7848 16 -     21101 AAC-----AAGAA-G-----------------------------AAATGTT
i Cercocebus_lunulatus.k141_4634644                     C 0 C 0
s Cercocebus_torquatus.k141_3969582                         65158 16 -    107033 AAC-----AAGAA-G-----------------------------AAATGTT
i Cercocebus_torquatus.k141_3969582                     C 0 C 0
s Cercopithecus_ascanius.k141_4123525                        8019 16 -     17608 AAC-----AAGAA-G-----------------------------AAATGTT
i Cercopithecus_ascanius.k141_4123525                   C 0 C 0
s Cercopithecus_cephus.k141_3893260                          5187 16 +     45019 AAC-----AAGAA-G-----------------------------AAATGTT
i Cercopithecus_cephus.k141_3893260                     C 0 C 0
s Cercopithecus_diana.k141_2561715                           5455 16 +     15177 AAC-----AAGAA-G-----------------------------AAATGTT
i Cercopithecus_diana.k141_2561715                      C 0 C 0
s Cercopithecus_hamlyni.k141_129805                          8069 16 +     16677 AAC-----AAGAA-G-----------------------------AAATGTT
i Cercopithecus_hamlyni.k141_129805                     C 0 C 0
s Cercopithecus_lowei.k141_623764                           30257 16 +     35983 AAC-----AAGAA-G-----------------------------AAATGTT
i Cercopithecus_lowei.k141_623764                       C 0 C 0
s Cercopithecus_albogularis.ctg51                              11996790 16 +  12117833 AAC-----AAGAA-G-----------------------------AAATGTT
i Cercopithecus_albogularis.ctg51                             C 0 C 0
s Cercopithecus_mona.ctg12                               46483772 16 +  46592721 AAC-----AAGAA-G-----------------------------AAATGTT
i Cercopithecus_mona.ctg12                              C 0 C 0
s Cercopithecus_neglectus.k141_2169300                       1875 16 -     27215 AAC-----AAGAA-G-----------------------------AAATGTT
i Cercopithecus_neglectus.k141_2169300                  C 0 C 0
s Cercopithecus_nictitans.k141_1129315                       8083 16 +     35577 AAC-----AAGAA-G-----------------------------AAATGTT
i Cercopithecus_nictitans.k141_1129315                  C 0 C 0
s Cercopithecus_petaurista.k141_64532                        7877 16 -     25661 AAC-----AAGAA-G-----------------------------AAATGTT
i Cercopithecus_petaurista.k141_64532                   C 0 C 0
s Cercopithecus_pogonias.k141_3109732                        8041 16 -     17744 AAC-----AAGAA-G-----------------------------AAATGTT
i Cercopithecus_pogonias.k141_3109732                   C 0 C 0
s Cercopithecus_roloway.k141_2263608                        27410 16 +     37128 AAC-----AAGAA-G-----------------------------AAATGTT
i Cercopithecus_roloway.k141_2263608                    C 0 C 0
s Chaetophractus_vellerosus.ChaVel_scaffold_197251           6395 19 -      6963 AGT--TGCAAGAA-C-----------------------------AAATGCT
i Chaetophractus_vellerosus.ChaVel_scaffold_197251      C 0 C 0
s Cheirogaleus_major.k141_1157592                           64978 19 -     68416 GGTC-CC-AGAAA-T-----------------------------AAATGTG
i Cheirogaleus_major.k141_1157592                       C 0 C 0
s Cheirogaleus_medius.k141_854352                            1279 19 +     27737 AGTC-CC-AGAAA-T-----------------------------AAATGTG
i Cheirogaleus_medius.k141_854352                       C 0 C 0
s Cheracebus_lucifer.k141_619653                            11217 16 -     18223 AAC-----AAGAA-G-----------------------------AAATGTT
i Cheracebus_lucifer.k141_619653                        C 0 C 0
s Cheracebus_lugens.k141_996499                              2958 16 +    188999 AAC-----AAGAA-G-----------------------------AAATGTT
i Cheracebus_lugens.k141_996499                         C 0 C 0
s Cheracebus_regulus.k141_2128895                           47257 16 +     57117 AAC-----AAGAA-G-----------------------------AAATGTT
i Cheracebus_regulus.k141_2128895                       C 0 C 0
s Cheracebus_torquatus.k141_315545                          51937 16 +     54541 AAC-----AAGAA-G-----------------------------AAATGTT
i Cheracebus_torquatus.k141_315545                      C 0 C 0
s Chinchilla_lanigera.JH721867.1                         15966690 19 +  43084221 GGTGA-C-AAGAA-T-----------------------------ACATTTT
i Chinchilla_lanigera.JH721867.1                        C 0 C 0
s Chiropotes_israelita.k141_1189915                         76738 11 +    196370 AAC-AAG-AAGAA--------------------------------------
i Chiropotes_israelita.k141_1189915                     C 0 I 5
s Chiropotes_sagulatus.k141_773804                          20919 11 +     40510 AAC-AAG-AAGAA--------------------------------------
i Chiropotes_sagulatus.k141_773804                      C 0 I 5
s Chlorocebus_aethiops.ctg22                             15145603 16 -  15256731 AAC-----AAGAA-G-----------------------------AAATGTT
i Chlorocebus_aethiops.ctg22                            C 0 C 0
s Chlorocebus_pygerythrus.k141_1486215                      40067 16 -     53260 AAC-----AAGAA-G-----------------------------AAATGTT
i Chlorocebus_pygerythrus.k141_1486215                  C 0 C 0
s Chlorocebus_sabaeus.CM001963.2                        101150626 16 + 101219884 AAC-----AAGAA-G-----------------------------AAATGTT
i Chlorocebus_sabaeus.CM001963.2                        C 0 C 0
s Choloepus_didactylus.ChoDid_scaffold_36182                20423 19 -     21363 AGTCAT--GAGAA-T-----------------------------AAATGCT
i Choloepus_didactylus.ChoDid_scaffold_36182            C 0 C 0
s Choloepus_hoffmanni.KN194586.1                           765727 19 +    964067 AGTCAT--GAGAA-T-----------------------------AAATGCT
i Choloepus_hoffmanni.KN194586.1                        C 0 C 0
s Chrysochloris_asiatica.ChrAsi_scaffold_304221              6220 19 -      7053 GGTCA-C-AAAAA-C-----------------------------ATTTGGT
i Chrysochloris_asiatica.ChrAsi_scaffold_304221         C 0 C 0
s Colobus_angolensis.KN985967.1                          10890396 16 +  10971483 AAC-----AAGAA-G-----------------------------AAATGTT
i Colobus_angolensis.KN985967.1                         C 0 C 0
s Colobus_guereza.LG08                                  147668324 16 + 156195979 AAC-----AAGAA-G-----------------------------AAATGTT
i Colobus_guereza.LG08                                  C 0 C 0
s Colobus_polykomos.k141_1406057                            20307 16 +     23629 AAC-----AAGAA-G-----------------------------AAATGTT
i Colobus_polykomos.k141_1406057                        C 0 C 0
s Condylura_cristata.JH655880.1                          60624717 19 +  78930452 GTTTA-C--aagaat-----------------------------aaaaatt
i Condylura_cristata.JH655880.1                         C 0 C 0
s Craseonycteris_thonglongyai.CraTho_scaffold_681988           18 19 -       362 GGT--TGAAAGAG-T-----------------------------TAATGTT
i Craseonycteris_thonglongyai.CraTho_scaffold_681988    C 0 C 0
s Cricetomys_gambianus.CriGam_scaffold_949                 284750 19 -    399297 GAATA-C-AATAA-T-----------------------------ATACATT
i Cricetomys_gambianus.CriGam_scaffold_949              C 0 C 0
s Cricetulus_griseus.LT883672.1                          53037036 19 +  72327488 Gaa-cac-aaaaa-t-----------------------------atacatt
i Cricetulus_griseus.LT883672.1                         C 0 C 0
s Crocidura_indochinensis.CroInd_scaffold_27484              4587 19 -     22648 TTTCA-C-AGGAA-T-----------------------------AAATATT
i Crocidura_indochinensis.CroInd_scaffold_27484         C 0 C 0
s Cryptoprocta_ferox.CryFer_flattened_line_19014            60118 19 -     70449 GGATAT--AAGAA-T-----------------------------AAATATT
i Cryptoprocta_ferox.CryFer_flattened_line_19014        C 0 C 0
s Ctenodactylus_gundi.CteGun_scaffold_447                  216885 14 -    956709 TGTCA-C-AAGTA-T-----------------------------CA-----
i Ctenodactylus_gundi.CteGun_scaffold_447               C 0 C 0
s Ctenomys_sociabilis.CteSoc_scaffold_19489                 38498 19 -     67205 GGTGA-C-AAGAG-T-----------------------------AAATGTT
i Ctenomys_sociabilis.CteSoc_scaffold_19489             C 0 C 0
s Cuniculus_paca.CunPac_flattened_line_16637                23226 19 +     26546 GCTGA-C-AAGAA-T-----------------------------AAATTTT
i Cuniculus_paca.CunPac_flattened_line_16637            C 0 C 0
s Dasyprocta_punctata.DasPun_flattened_line_634             64353 19 -    236241 GGTGA-C-AAGAA-T-----------------------------GAATTTT
i Dasyprocta_punctata.DasPun_flattened_line_634         C 0 C 0
s Dasypus_novemcinctus.JH568778.1                          187458 10 -   6883506 AGTCA-C-AGGA---------------------------------------
i Dasypus_novemcinctus.JH568778.1                       C 0 I 5
s Daubentonia_madagascariensis.ctg11                     16850918 19 +  31942871 GGTC-CC-AGAAA-T-----------------------------AAATGTG
i Daubentonia_madagascariensis.ctg11                    C 0 C 0
s Delphinapterus_leucas.KZ290064.1                       80043229 19 -  96802777 GGTC-ac-aagaa-t-----------------------------aaaattt
i Delphinapterus_leucas.KZ290064.1                      C 0 C 0
s Desmodus_rotundus.KZ672188.1                           18704145 19 -  18957592 GGc-cac-aagaa-t-----------------------------aaatttt
i Desmodus_rotundus.KZ672188.1                          C 0 C 0
s Dicerorhinus_sumatrensis.PEKH010003161.1                 329132 19 +    993696 GATCA-C-AAAAA-T-----------------------------TAATGTT
i Dicerorhinus_sumatrensis.PEKH010003161.1              C 0 C 0
s Diceros_bicornis.DicBicMic_scaffold_9545                   9766 19 +    151128 GATCA-C-AAAAA-T-----------------------------TAATGTT
i Diceros_bicornis.DicBicMic_scaffold_9545              C 0 C 0
s Dinomys_branickii.DinBra_scaffold_1996                   162298 19 +    228994 AGTGA-C-AAGAA-C-----------------------------ACATGTT
i Dinomys_branickii.DinBra_scaffold_1996                C 0 C 0
s Dolichotis_patagonum.DolPat_scaffold_14102                42927 19 -     73477 AGT-AAC-AAGAA-T-----------------------------AAATTTT
i Dolichotis_patagonum.DolPat_scaffold_14102            C 0 C 0
s Echinops_telfairi.JH980316.1                           23007384 18 -  44670279 CATCA-C-AAAAA-T-----------------------------GATTAG-
i Echinops_telfairi.JH980316.1                          C 0 C 0
s Eidolon_helvum.KE772537.1                                 16343 19 +     24177 GGTCAT--AGGAA-T-----------------------------AAACATT
i Eidolon_helvum.KE772537.1                             C 0 C 0
s Elaphurus_davidianus.JRFZ01086400.1                     1499200 19 +   1727528 GGTCA-C-AAGAA-T-----------------------------AAAAGTT
i Elaphurus_davidianus.JRFZ01086400.1                   C 0 C 0
s Ellobius_lutescens.LOEQ01003611.1                        245738 19 -    369425 GGACA-C-AAAAA-T-----------------------------ACACATT
i Ellobius_lutescens.LOEQ01003611.1                     C 0 C 0
s Ellobius_talpinus.LOJH01076532.1                           2089 19 +      9159 GGACA-C-AAAAA-T-----------------------------ACACATT
i Ellobius_talpinus.LOJH01076532.1                      C 0 C 0
s Enhydra_lutris.KZ291749.1                              85880066 17 +  99434291 GTTCAT--AACAA-T-----------------------------AAATA--
i Enhydra_lutris.KZ291749.1                             C 0 C 0
s Eptesicus_fuscus.JH977687.1                             4711922 19 +   6522550 GGTCA-C-AAGAA-T-----------------------------AAATGTT
i Eptesicus_fuscus.JH977687.1                           C 0 C 0
s Equus_asinus.JREZ01000062.1                             5858992 19 -   7175178 GATCA-C-AAGAA-T-----------------------------AAATTTC
i Equus_asinus.JREZ01000062.1                           C 0 C 0
s Equus_caballus.CM000402.2                              13357478 19 +  41866177 gat-cac-aAGAA-T-----------------------------AAATTTC
i Equus_caballus.CM000402.2                             C 0 C 0
s Equus_przewalskii.ATBW01073585.1                          18968 19 +     92910 GATCA-C-AAGAA-T-----------------------------AAATTTC
i Equus_przewalskii.ATBW01073585.1                      C 0 C 0
s Erinaceus_europaeus.JH835290.1                         11544453 19 +  16010500 GTTTA-C-AAGGA-T-----------------------------GAATGTT
i Erinaceus_europaeus.JH835290.1                        C 0 C 0
s Erythrocebus_patas.Contig8                             48782636 16 -  48907691 AAC-----AAGAA-G-----------------------------AAATGTT
i Erythrocebus_patas.Contig8                            C 0 C 0
s Eschrichtius_robustus.EscRob_flattened_line_685          321488 19 +    330699 GGTCA-C-AAAAA-T-----------------------------AAAATTC
i Eschrichtius_robustus.EscRob_flattened_line_685       C 0 C 0
s Eubalaena_japonica.EubJap_flattened_line_7756             67940 19 +     89355 GGTCA-C-AAGAA-T-----------------------------AAAATTC
i Eubalaena_japonica.EubJap_flattened_line_7756         C 0 C 0
s Eulemur_albifrons.k141_715837                             11044 19 +     13586 AGTC-CC-AGAAA-T-----------------------------AAATGTG
i Eulemur_albifrons.k141_715837                         C 0 C 0
s Eulemur_collaris.k141_419870                                152 19 +      2668 AGTC-CC-AGAAA-T-----------------------------AAATGTG
i Eulemur_collaris.k141_419870                          C 0 C 0
s Eulemur_coronatus.k141_3240342                            17440 19 +     36558 GGTC-CC-AGAAA-T-----------------------------AAATGTG
i Eulemur_coronatus.k141_3240342                        C 0 C 0
s Eulemur_flavifrons.k141_903901                            13762 19 +     60246 GGTC-CC-AGAAA-T-----------------------------AAATGTG
i Eulemur_flavifrons.k141_903901                        C 0 C 0
s Eulemur_fulvus.k141_653297                                17247 19 +    109717 GGTC-CC-AGAAA-T-----------------------------AAATGTG
i Eulemur_fulvus.k141_653297                            C 0 C 0
s Eulemur_macaco.k141_747087                                 5230 19 -     19505 GGTC-CC-AGAAA-T-----------------------------AAATGTG
i Eulemur_macaco.k141_747087                            C 0 C 0
s Eulemur_mongoz.k141_825972                                21905 19 +     27497 GGTC-CC-AGAAA-T-----------------------------AAATGTG
i Eulemur_mongoz.k141_825972                            C 0 C 0
s Eulemur_rubriventer.k141_411740                           24355 19 +     26808 GGTC-CC-AGAAA-T-----------------------------AAATGTG
i Eulemur_rubriventer.k141_411740                       C 0 C 0
s Eulemur_rufus.k141_1620292                                39093 19 +     46535 AGTC-CC-AGAAA-T-----------------------------AAATGTG
i Eulemur_rufus.k141_1620292                            C 0 C 0
s Eulemur_sanfordi.k141_186399                              21834 19 -     29447 AGTC-CC-AGAAA-T-----------------------------AAATGTG
i Eulemur_sanfordi.k141_186399                          C 0 C 0
s Felis_catus.CM001386.2                                129901761 19 - 159252932 Ggt-tat-aagaa-t-----------------------------aaatatt
i Felis_catus.CM001386.2                                C 0 C 0
s Felis_catus_fca126.CM031420.1                         129288738 19 - 158578461 Ggt-tat-aagaa-t-----------------------------aaatatt
i Felis_catus_fca126.CM031420.1                         C 0 C 0
s Felis_nigripes.FelNig_flattened_line_8080                 29928 19 +     52776 GGTTAT--AAGAA-T-----------------------------AAATATT
i Felis_nigripes.FelNig_flattened_line_8080             C 0 C 0
s Fukomys_damarensis.KN123630.1                          13899782 19 -  19261668 GTT-AAC-AAGAA-A-----------------------------AAGTGTT
i Fukomys_damarensis.KN123630.1                         C 0 C 0
s Galago_moholi.ctg555                                     217078 19 -    847004 GGTC-TC-AGAAA-T-----------------------------AAATGTG
i Galago_moholi.ctg555                                  C 0 C 0
s Galago_senegalensis.k141_964197                           19440 19 -     43889 GGTC-TC-AGAAA-T-----------------------------AAATGTG
i Galago_senegalensis.k141_964197                       C 0 C 0
s Galagoides_demidoff.k141_1769638                          16581 19 +     27357 GGTC-CC-AGAAA-T-----------------------------AAATGTG
i Galagoides_demidoff.k141_1769638                      C 0 C 0
s Galeopterus_variegatus.GalVar_scaffold_354               161398 19 +    324696 GGTCA-C-AGAAA-T-----------------------------AAATGTT
i Galeopterus_variegatus.GalVar_scaffold_354            I 41 C 0
s Giraffa_tippelskirchi.LVKQ01S012154.1                    188928 19 -    189561 GGt-cac-aaaaa-t-----------------------------aaaagtt
i Giraffa_tippelskirchi.LVKQ01S012154.1                 C 0 C 0
s Glis_glis.GliGli_scaffold_79770                           18284 19 -     18683 GGTTA-C-AAGAA-T-----------------------------AAATATT
i Glis_glis.GliGli_scaffold_79770                       C 0 C 0
s Gorilla_beringei.k141_111300                              11037 16 -     14630 AAC-----AAGAA-T-----------------------------AAATGTT
i Gorilla_beringei.k141_111300                          C 0 C 0
s Gorilla_gorilla.LT578340.1                            119658137 16 - 195582420 AAC-----AAGAA-T-----------------------------AAATGTT
i Gorilla_gorilla.LT578340.1                            C 0 C 0
s Hapalemur_alaotrensis.k141_1280836                         7836 19 +     10286 GGTC-CC-AGAAA-T-----------------------------AAATGTG
i Hapalemur_alaotrensis.k141_1280836                    C 0 C 0
s Hapalemur_gilberti.k141_279011                             6317 19 -     11661 GGTC-CC-AGAAA-T-----------------------------AAATGTG
i Hapalemur_gilberti.k141_279011                        C 0 C 0
s Hapalemur_griseus.k141_1387522                            11641 19 +     56096 GGTC-CC-AGAAA-T-----------------------------AAATGTG
i Hapalemur_griseus.k141_1387522                        C 0 C 0
s Hapalemur_meridionalis.k141_186231                        34890 19 -     42470 GGTC-CC-AGAAA-T-----------------------------AAATGTG
i Hapalemur_meridionalis.k141_186231                    C 0 C 0
s Hapalemur_occidentalis.k141_797938                        51516 19 -     54384 GGTC-CC-AGAAA-T-----------------------------AAATGTG
i Hapalemur_occidentalis.k141_797938                    C 0 C 0
s Helogale_parvula.HelPar_flattened_line_22962              25236 19 +     53719 GCTTAT--AAGAA-T-----------------------------AAATATT
i Helogale_parvula.HelPar_flattened_line_22962          C 0 C 0
s Hemitragus_hylocrius.HemHyl_scaffold_16669                36019 19 -     91191 GGTCAT--GAGAA-T-----------------------------AAAAGTT
i Hemitragus_hylocrius.HemHyl_scaffold_16669            C 0 C 0
s Heterocephalus_glaber.JH602058.1                        2563949 20 +  31725842 agt-gac-aagaa-a----------------------------aaaatgtt
i Heterocephalus_glaber.JH602058.1                      C 0 C 0
s Heterohyrax_brucei.HetBruBak_scaffold_25354               65529 19 +     73687 GGTCA-C-AACAA-T-----------------------------ATTTGCT
i Heterohyrax_brucei.HetBruBak_scaffold_25354           C 0 C 0
s Hippopotamus_amphibius.HipAmp_scaffold_1308              153310 16 +    277961 GGTCA-C-A---A-T-----------------------------AAAATTT
i Hippopotamus_amphibius.HipAmp_scaffold_1308           C 0 C 0
s Hipposideros_armiger.JXIK01001085.1                      287273 19 -    477199 GATCA-C-AAGGA-T-----------------------------AAATGGC
i Hipposideros_armiger.JXIK01001085.1                   C 0 C 0
s Hipposideros_galeritus.HipGal_scaffold_52959               4547 19 +     26078 GATCA-C-AAGGA-T-----------------------------AAATGGC
i Hipposideros_galeritus.HipGal_scaffold_52959          C 0 C 0
s Hoolock_leuconedys.ctg79                                     10956 16 -   7690867 AAC-----AAGAA-G-----------------------------AAATGTT
i Hoolock_leuconedys.ctg79                                 C 0 C 0
s Hyaena_hyaena.HyaHya_flattened_line_20729                 25670 19 -     67322 GGTTAT--AAGAA-T-----------------------------AAATATT
i Hyaena_hyaena.HyaHya_flattened_line_20729             C 0 C 0
s Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259           23588 19 -    119109 GGTGA-C-AAGAA-T-----------------------------AAACTTT
i Hydrochoerus_hydrochaeris.HydHyd_scaffold_13259       C 0 C 0
s Hylobates_abbotti.k141_1048809                              125 16 -      6555 AAC-----AAGAA-G-----------------------------AAATGTT
i Hylobates_abbotti.k141_1048809                        C 0 C 0
s Hylobates_agilis.k141_1136966                              1532 16 +      9785 AAC-----AAGAA-G-----------------------------AAATGTT
i Hylobates_agilis.k141_1136966                         C 0 C 0
s Hylobates_klossii.k141_1069878                               72 16 +      2316 AAC-----AAGAA-G-----------------------------AAATGTT
i Hylobates_klossii.k141_1069878                        C 0 C 0
s Hylobates_pileatus_b.ContigUN                                 14630358 16 -  25970782 AAC-----AAGAA-G-----------------------------AAATGTT
i Hylobates_pileatus_b.ContigUN                                C 0 C 0
s Hylobates_muelleri.k141_1139146                            2909 16 +      4161 AAC-----AAGAA-G-----------------------------AAATGTT
i Hylobates_muelleri.k141_1139146                       C 0 C 0
s Hystrix_cristata.HysCri_scaffold_50788                    11873 19 +     22540 GGTGA-C-AAGAA-T-----------------------------AAATATT
i Hystrix_cristata.HysCri_scaffold_50788                C 0 C 0
s Ictidomys_tridecemlineatus.JH393315.1                   7132137 19 +  13083262 TGTCA-C-AAGAA-T-----------------------------AAATGTT
i Ictidomys_tridecemlineatus.JH393315.1                 C 0 C 0
s Indri_indri.k141_2197838                                   3374 19 +      3484 GGTC-CC-AGAAA-T-----------------------------AAACGTG
i Indri_indri.k141_2197838                              C 0 C 0
s Inia_geoffrensis.IniGeo_flattened_line_66725              15456 19 +     17520 GGTCAT--AAGAA-T-----------------------------AAAATTT
i Inia_geoffrensis.IniGeo_flattened_line_66725          C 0 C 0
s Jaculus_jaculus.JH725517.1                              8581134 19 +  11848649 AAATAT--AAGAA-T-----------------------------AAACGTT
i Jaculus_jaculus.JH725517.1                            C 0 C 0
s Kogia_breviceps.KogBre_flattened_line_35920               30085 19 +     37189 GGTCA-C-AAGAA-T-----------------------------AAAATTT
i Kogia_breviceps.KogBre_flattened_line_35920           C 0 C 0
s Lagothrix_lagothricha.k141_12968                          55780 16 -    147782 AAC-----AAGAA-G-----------------------------AAATGTT
i Lagothrix_lagothricha.k141_12968                      C 0 C 0
s Lasiurus_borealis.LasBor_scaffold_59542                    9623 19 +     26176 GGTCA-C-AATAA-T-----------------------------AAATGTT
i Lasiurus_borealis.LasBor_scaffold_59542               C 0 C 0
s Lemur_catta.scaffold_1                                258413194 19 - 285822530 GGTC-CC-AGAAA-T-----------------------------AAATGTG
i Lemur_catta.scaffold_1                                C 0 C 0
s Lepilemur_ankaranensis.k141_884009                        30513 19 +     39228 GGTC-CC-AGAAA-T-----------------------------AAATGTG
i Lepilemur_ankaranensis.k141_884009                    C 0 C 0
s Lepilemur_dorsalis.k141_134267                            59879 19 +     63517 GGTC-CC-AGAAA-T-----------------------------AAATGTG
i Lepilemur_dorsalis.k141_134267                        C 0 C 0
s Lepilemur_ruficaudatus.k141_574529                        38260 19 -     38897 GGTC-CC-AGAAA-T-----------------------------AAATGTG
i Lepilemur_ruficaudatus.k141_574529                    C 0 C 0
s Lepilemur_septentrionalis.k141_710646                      4305 19 -     13103 GGTC-CC-AGAAA-T-----------------------------AAATGTG
i Lepilemur_septentrionalis.k141_710646                 C 0 C 0
s Leptonychotes_weddellii.KB714749.1                      3094509 19 -   3498232 GGT-tgt-aagaa-t-----------------------------aaatatt
i Leptonychotes_weddellii.KB714749.1                    C 0 C 0
s Lepus_americanus.LepAme_scaffold_470947                     526 16 -      1692 GGTTA-C-CAG---T-----------------------------GAAT-TT
i Lepus_americanus.LepAme_scaffold_470947               C 0 C 0
s Lipotes_vexillifer.KE558548.1                            142378 19 +   3060487 GGTCA-C-AAGAA-T-----------------------------AAAATTT
i Lipotes_vexillifer.KE558548.1                         C 0 C 0
s Lophocebus_aterrimus.ctg55                             19254256 16 +  19376315 AAC-----AAGAA-G-----------------------------AAATGTT
i Lophocebus_aterrimus.ctg55                            C 0 C 0
s Loris_lydekkerianus.k141_550999                           17021 19 +     84689 GGTC-CC-AGAAA-T-----------------------------AAATGTG
i Loris_lydekkerianus.k141_550999                       C 0 C 0
s Loris_tardigradus.ctg97                                 3784754 19 +   6799190 GGTC-CC-AGAAA-T-----------------------------AAATGTG
i Loris_tardigradus.ctg97                               C 0 C 0
s Loxodonta_africana.GL010040.1                          20601095 12 -  62548349 GGTCA-C-AAGAA-T------------------------------------
i Loxodonta_africana.GL010040.1                         C 0 C 0
s Lycaon_pictus.CM007556.1                               11097756 19 +  39895028 GGt-tgt-aagaa-t-----------------------------aaatatt
i Lycaon_pictus.CM007556.1                              C 0 C 0
s Macaca_arctoides.k141_2201161                             26005 16 +     74745 AAC-----AAGAA-G-----------------------------AAATGTT
i Macaca_arctoides.k141_2201161                         C 0 C 0
s Macaca_assamensis.Contig65                             12712468 16 +  12821369 AAC-----AAGAA-G-----------------------------AAATGTT
i Macaca_assamensis.Contig65                            C 0 C 0
s Macaca_cyclopis.k119_883699                                5041 16 -     26467 AAC-----AAGAA-G-----------------------------AAATGTT
i Macaca_cyclopis.k119_883699                           C 0 C 0
s Macaca_fascicularis.k141_155037                           52912 16 +     63263 AAC-----AAGAA-G-----------------------------AAATGTT
i Macaca_fascicularis.k141_155037                       C 0 C 0
s Macaca_fuscata.k119_938422                                 5022 16 -     26361 AAC-----AAGAA-G-----------------------------AAATGTT
i Macaca_fuscata.k119_938422                            C 0 C 0
s Macaca_leonina.k141_2667654                                1326 16 -      5626 AAC-----AAGAA-G-----------------------------AAATGTT
i Macaca_leonina.k141_2667654                           C 0 C 0
s Macaca_maura.k141_251854                                  51441 16 -     79256 AAC-----AAGAA-G-----------------------------AAATGTT
i Macaca_maura.k141_251854                              C 0 C 0
s Macaca_mulatta.NC_041755.1                            196041539 16 + 196197964 AAC-----AAGAA-G-----------------------------AAATGTT
i Macaca_mulatta.NC_041755.1                            C 0 C 0
s Macaca_nemestrina.KQ004885.1                           11451709 16 +  11645122 AAC-----AAGAA-G-----------------------------AAATGTT
i Macaca_nemestrina.KQ004885.1                          C 0 C 0
s Macaca_nigra.k141_282495                                  10395 16 -     46448 AAC-----AAGAA-G-----------------------------AAATGTT
i Macaca_nigra.k141_282495                              C 0 C 0
s Macaca_radiata.k141_3680256                                8057 16 -     13212 AAC-----AAGAA-G-----------------------------AAATGTT
i Macaca_radiata.k141_3680256                           C 0 C 0
s Macaca_siberu.k141_741907                                 21738 16 -     55006 AAC-----AAGAA-G-----------------------------AAATGTT
i Macaca_siberu.k141_741907                             C 0 C 0
s Macaca_silenus.Contig12                                43847161 16 +  43892939 AAC-----AAGAA-G-----------------------------AAATGTT
i Macaca_silenus.Contig12                               C 0 C 0
s Macaca_thibetana.k99_662710                               23023 16 -     24607 AAC-----AAGAA-G-----------------------------AAATGTT
i Macaca_thibetana.